chr1	184920	199868	184920	199868	-	transcript2.chr1.nnic@FO538757.1	transcript2.chr1.nnic	unprocessed_pseudogene	199837,198063,195263,188791,188439,188130,187755,187376,187129,186317,185491,184920	199868,198165,195416,188902,188584,188266,187890,187577,187287,186469,185559,185350	Gene ID= ENSG00000279457.4 TPM= 4.67 Transcript Type= NA
chr1	184920	199875	184920	199875	-	transcript13.chr1.nnic@FO538757.1	transcript13.chr1.nnic	unprocessed_pseudogene	199837,195263,188791,188439,187755,187376,187129,186317,185491,184920	199875,195416,188889,188584,188266,187577,187287,186469,185559,185350	Gene ID= ENSG00000279457.4 TPM= 4.67 Transcript Type= NA
chr1	184920	199875	184920	199875	-	transcript14.chr1.nnic@FO538757.1	transcript14.chr1.nnic	unprocessed_pseudogene	199837,195263,188791,188439,188130,187376,187129,186317,185491,184920	199875,195416,188889,188584,188266,187577,187287,186469,185559,185350	Gene ID= ENSG00000279457.4 TPM= 3.5 Transcript Type= NA
chr1	184878	199875	184878	199875	-	transcript19.chr1.nnic@FO538757.1	transcript19.chr1.nnic	unprocessed_pseudogene	199837,195263,188791,188439,188130,187755,187376,187129,184878	199875,195416,188889,188584,188266,187890,187577,187287,186469	Gene ID= ENSG00000279457.4 TPM= 5.25 Transcript Type= NA
chr1	827610	854398	827610	854398	+	transcript56.chr1.nnic@LINC01128	transcript56.chr1.nnic	processed_transcript	827610,829003,851927,852671,853391,853528	827775,829104,852110,852766,853478,854398	Gene ID= ENSG00000228794.8 TPM= 3.5 Transcript Type= NA
chr1	826206	827522	826206	827522	-	ENST00000473798.1@LINC00115	ENST00000473798.1	lincRNA	826206	827522	Gene ID= ENSG00000225880.5 TPM= 5.84 Transcript Type= lincRNA
chr1	916865	921016	916865	921016	-	ENST00000609207.1@AL645608.1	ENST00000609207.1	lincRNA	916865	921016	Gene ID= ENSG00000223764.2 TPM= 2.34 Transcript Type= retained_intron
chr1	944204	959306	944204	959306	-	transcript60.chr1.nnic@NOC2L	transcript60.chr1.nnic	protein_coding	959215,958929,957099,956894,956095,955923,954464,954004,953782,953175,952412,952000,951127,948490,948131,946402,946173,945518,945042,944204	959306,959081,957273,957025,956215,956013,954523,954082,953892,953288,952600,952139,951238,948603,948232,946545,946286,945653,945146,944800	Gene ID= ENSG00000188976.10 TPM= 14.79 Transcript Type= NA
chr1	944204	959306	944204	959306	-	transcript65.chr1.nic@NOC2L	transcript65.chr1.nic	protein_coding	959215,958929,957099,956894,956095,955923,954004,953782,953175,952412,952000,951127,948490,948131,946402,946173,945518,945042,944204	959306,959081,957273,957025,956215,956013,954082,953892,953288,952600,952139,951238,948603,948232,946545,946286,945653,945146,944800	Gene ID= ENSG00000188976.10 TPM= 100.03 Transcript Type= NA
chr1	944204	959290	944204	959290	-	ENST00000327044.6@NOC2L	ENST00000327044.6	protein_coding	959215,958929,957099,956894,956095,955923,954004,953782,953175,952412,952000,951127,948490,948131,946402,946173,945518,945057,944204	959290,959081,957273,957025,956215,956013,954082,953892,953288,952600,952139,951238,948603,948232,946545,946286,945653,945146,944800	Gene ID= ENSG00000188976.10 TPM= 258.82 Transcript Type= protein_coding
chr1	958246	959256	958246	959256	-	ENST00000469563.1@NOC2L	ENST00000469563.1	protein_coding	959215,958246	959256,959081	Gene ID= ENSG00000188976.10 TPM= 1.17 Transcript Type= retained_intron
chr1	960571	965715	960571	965715	+	transcript106.chr1.nnic@KLHL17	transcript106.chr1.nnic	protein_coding	960571,961629,961826,962355,962704,963109,963337,963920,964107,964349,964963	960800,961750,962047,962471,962917,963253,963504,964008,964180,964530,965715	Gene ID= ENSG00000187961.13 TPM= 2.34 Transcript Type= NA
chr1	960587	965715	960587	965715	+	ENST00000338591.7@KLHL17	ENST00000338591.7	protein_coding	960587,961293,961629,961826,962355,962704,963109,963337,963920,964107,964349,964963	960800,961552,961750,962047,962471,962917,963253,963504,964008,964180,964530,965715	Gene ID= ENSG00000187961.13 TPM= 17.51 Transcript Type= protein_coding
chr1	998964	1000862	998964	1000862	-	transcript123.chr1.nic@HES4	transcript123.chr1.nic	protein_coding	999866,999526,998964	1000862,999787,999432	Gene ID= ENSG00000188290.10 TPM= 6.42 Transcript Type= NA
chr1	998966	1000096	998966	1000096	-	ENST00000481869.1@HES4	ENST00000481869.1	protein_coding	999526,998966	1000096,999432	Gene ID= ENSG00000188290.10 TPM= 41.45 Transcript Type= retained_intron
chr1	998964	1000111	998964	1000111	-	ENST00000304952.10@HES4	ENST00000304952.10	protein_coding	999866,999692,999526,998964	1000111,999787,999613,999432	Gene ID= ENSG00000188290.10 TPM= 17.51 Transcript Type= protein_coding
chr1	1013423	1014540	1013423	1014540	+	ENST00000379389.4@ISG15	ENST00000379389.4	protein_coding	1013423,1013984	1013576,1014540	Gene ID= ENSG00000187608.8 TPM= 162.3 Transcript Type= protein_coding
chr1	1070966	1074307	1070966	1074307	-	ENST00000453464.2@RNF223	ENST00000453464.2	protein_coding	1074016,1070966	1074307,1072575	Gene ID= ENSG00000237330.2 TPM= 1.17 Transcript Type= protein_coding
chr1	1081823	1116099	1081823	1116099	-	transcript142.chr1.nic@C1orf159	transcript142.chr1.nic	protein_coding	1116060,1091991,1091472,1090876,1090353,1087502,1087139,1085878,1084481,1084353,1081823	1116099,1092103,1091565,1090983,1090428,1087597,1087204,1086012,1084506,1084383,1082987	Gene ID= ENSG00000131591.17 TPM= 4.09 Transcript Type= NA
chr1	1081823	1116098	1081823	1116098	-	ENST00000421241.6@C1orf159	ENST00000421241.6	protein_coding	1116060,1091991,1091472,1090353,1087502,1087139,1085878,1084481,1084353,1081823	1116098,1092103,1091565,1090428,1087597,1087204,1086012,1084506,1084383,1082987	Gene ID= ENSG00000131591.17 TPM= 4.09 Transcript Type= protein_coding
chr1	1168268	1170337	1168268	1170337	+	transcript147.chr1.nnic@NA	transcript147.chr1.nnic	NA	1168268	1170337	Gene ID= novel_gene_chr1_148 TPM= 2.34 Transcript Type= NA
chr1	1211326	1214153	1211326	1214153	-	transcript153.chr1.nic@TNFRSF4	transcript153.chr1.nic	protein_coding	1213983,1212992,1212638,1211942,1211704,1211326	1214153,1213785,1212704,1212138,1211832,1211625	Gene ID= ENSG00000186827.10 TPM= 2.34 Transcript Type= NA
chr1	1211326	1214132	1211326	1214132	-	ENST00000379236.3@TNFRSF4	ENST00000379236.3	protein_coding	1213983,1213663,1212992,1212638,1211942,1211704,1211326	1214132,1213785,1213093,1212704,1212138,1211832,1211625	Gene ID= ENSG00000186827.10 TPM= 11.68 Transcript Type= protein_coding
chr1	1216932	1232034	1216932	1232034	-	transcript164.chr1.nnic@SDF4	transcript164.chr1.nnic	protein_coding	1231507,1228468,1223832,1223244,1218769,1218458,1216932	1232034,1228946,1223968,1223357,1218927,1218633,1217688	Gene ID= ENSG00000078808.16 TPM= 38.53 Transcript Type= NA
chr1	1216908	1232001	1216908	1232001	-	ENST00000360001.10@SDF4	ENST00000360001.10	protein_coding	1231892,1228468,1223832,1223244,1218769,1218458,1216908	1232001,1228946,1223968,1223357,1218927,1218633,1217688	Gene ID= ENSG00000078808.16 TPM= 369.34 Transcript Type= protein_coding
chr1	1216931	1232031	1216931	1232031	-	ENST00000263741.11@SDF4	ENST00000263741.11	protein_coding	1231892,1228468,1223832,1223244,1218769,1218458,1216931	1232031,1228946,1223968,1223357,1218927,1218633,1217804	Gene ID= ENSG00000078808.16 TPM= 7.39 Transcript Type= protein_coding
chr1	1232265	1235041	1232265	1235041	+	ENST00000379198.3@B3GALT6	ENST00000379198.3	protein_coding	1232265	1235041	Gene ID= ENSG00000176022.4 TPM= 78.23 Transcript Type= protein_coding
chr1	1253914	1273833	1253914	1273833	-	transcript183.chr1.nic@UBE2J2	transcript183.chr1.nic	protein_coding	1272853,1267862,1263346,1257208,1256992,1256045,1253914	1273833,1267992,1263386,1257310,1257130,1256125,1255487	Gene ID= ENSG00000160087.20 TPM= 5.25 Transcript Type= NA
chr1	1254901	1273848	1254901	1273848	-	transcript191.chr1.nnic@UBE2J2	transcript191.chr1.nnic	protein_coding	1273051,1267862,1263346,1257208,1256992,1256045,1254901	1273848,1267992,1263386,1257310,1257130,1256125,1255487	Gene ID= ENSG00000160087.20 TPM= 3.5 Transcript Type= NA
chr1	1254470	1273885	1254470	1273885	-	ENST00000349431.10@UBE2J2	ENST00000349431.10	protein_coding	1273666,1267862,1263346,1257208,1256992,1256045,1254470	1273885,1267992,1263386,1257310,1257130,1256125,1255487	Gene ID= ENSG00000160087.20 TPM= 37.36 Transcript Type= protein_coding
chr1	1285472	1292024	1285472	1292024	+	transcript202.chr1.nic@SCNN1D	transcript202.chr1.nic	protein_coding	1285472,1286768,1287109,1287508,1287673,1287939,1290271,1290477,1290637,1290895,1291065,1291254	1286278,1286975,1287299,1287596,1287836,1288037,1290388,1290555,1290694,1290953,1291140,1292024	Gene ID= ENSG00000162572.20 TPM= 3.5 Transcript Type= NA
chr1	1292870	1308060	1292870	1308060	-	transcript219.chr1.nic@ACAP3	transcript219.chr1.nic	protein_coding	1307769,1304086,1303162,1302922,1301988,1300509,1300158,1299973,1299831,1298567,1298370,1298013,1297822,1296425,1296211,1296015,1295736,1295447,1294718,1294402,1294090,1293823,1292870	1308060,1304143,1303281,1302975,1302046,1300692,1300202,1300068,1299905,1299356,1298421,1298113,1297933,1296633,1296280,1296109,1295938,1295554,1294816,1294628,1294199,1293933,1293708	Gene ID= ENSG00000131584.18 TPM= 18.42 Transcript Type= NA
chr1	1292870	1307923	1292870	1307923	-	transcript232.chr1.nic@ACAP3	transcript232.chr1.nic	protein_coding	1307769,1304086,1303162,1302922,1301988,1300509,1300158,1299973,1298567,1298370,1298013,1297822,1296425,1296211,1296015,1295736,1295447,1294718,1294402,1294090,1293823,1292870	1307923,1304143,1303281,1302975,1302046,1300692,1300202,1300068,1299905,1298421,1298113,1297933,1296633,1296280,1296109,1295938,1295554,1294816,1294628,1294199,1293933,1293708	Gene ID= ENSG00000131584.18 TPM= 17.26 Transcript Type= NA
chr1	1292376	1308018	1292376	1308018	-	ENST00000354700.9@ACAP3	ENST00000354700.9	protein_coding	1307769,1304086,1303162,1302922,1301988,1300509,1300158,1299973,1299831,1299345,1298567,1298370,1298013,1297822,1296425,1296211,1296015,1295736,1295447,1294718,1294402,1294090,1293823,1292376	1308018,1304143,1303281,1302975,1302046,1300692,1300202,1300068,1299905,1299356,1298679,1298421,1298113,1297933,1296633,1296280,1296109,1295938,1295554,1294816,1294628,1294199,1293933,1293708	Gene ID= ENSG00000131584.18 TPM= 49.86 Transcript Type= protein_coding
chr1	1308567	1311677	1308567	1311677	+	ENST00000379031.9@PUSL1	ENST00000379031.9	protein_coding	1308567,1308915,1309086,1309454,1309681,1310634,1310909,1311330	1308720,1308972,1309273,1309603,1309851,1310688,1311071,1311677	Gene ID= ENSG00000169972.11 TPM= 9.92 Transcript Type= protein_coding
chr1	1308603	1311677	1308603	1311677	+	transcript263.chr1.nic@PUSL1	transcript263.chr1.nic	protein_coding	1308603,1309086,1309454,1309681,1310634,1310909,1311330	1308972,1309273,1309603,1309851,1310688,1311071,1311677	Gene ID= ENSG00000169972.11 TPM= 5.25 Transcript Type= NA
chr1	1311585	1324687	1311585	1324687	-	ENST00000545578.5@INTS11	ENST00000545578.5	protein_coding	1324581,1323181,1320996,1320456,1319296,1315520,1315404,1314824,1314301,1313732,1313509,1313035,1312787,1312593,1312440,1312226,1312018,1311585	1324687,1323287,1321093,1320529,1319524,1315618,1315438,1314962,1314365,1313921,1313592,1313124,1312949,1312700,1312501,1312368,1312147,1311924	Gene ID= ENSG00000127054.20 TPM= 7.59 Transcript Type= protein_coding
chr1	1311597	1324691	1311597	1324691	-	ENST00000435064.5@INTS11	ENST00000435064.5	protein_coding	1324581,1320996,1320456,1319296,1315520,1315404,1314824,1314301,1313732,1313509,1313035,1312787,1312593,1312440,1312226,1312018,1311597	1324691,1321093,1320529,1319524,1315618,1315438,1314962,1314365,1313921,1313592,1313124,1312949,1312700,1312501,1312368,1312147,1311924	Gene ID= ENSG00000127054.20 TPM= 133.69 Transcript Type= protein_coding
chr1	1311606	1324637	1311606	1324637	-	ENST00000421495.6@INTS11	ENST00000421495.6	protein_coding	1324581,1315520,1315404,1314824,1314301,1313732,1313509,1313035,1312787,1312593,1312440,1312226,1312018,1311606	1324637,1315618,1315438,1314962,1314365,1314105,1313592,1313124,1312949,1312700,1312501,1312368,1312147,1311924	Gene ID= ENSG00000127054.20 TPM= 3.5 Transcript Type= protein_coding
chr1	1315795	1317415	1315795	1317415	+	transcript271.chr1.nnic@NA	transcript271.chr1.nnic	NA	1315795	1317415	Gene ID= novel_gene_chr1_272 TPM= 4.67 Transcript Type= NA
chr1	1317588	1318660	1317588	1318660	+	transcript273.chr1.nnic@NA	transcript273.chr1.nnic	NA	1317588	1318660	Gene ID= novel_gene_chr1_274 TPM= 3.5 Transcript Type= NA
chr1	1324767	1328897	1324767	1328897	+	ENST00000343938.8@CPTP	ENST00000343938.8	protein_coding	1324767,1326836,1327241	1325102,1327032,1328897	Gene ID= ENSG00000224051.6 TPM= 50.21 Transcript Type= protein_coding
chr1	1335279	1349421	1335279	1349421	-	transcript303.chr1.nic@DVL1	transcript303.chr1.nic	protein_coding	1348896,1342689,1342363,1342053,1341667,1340410,1340247,1340038,1339736,1339362,1338522,1338269,1337977,1335279	1349421,1342758,1342484,1342156,1341805,1340503,1340316,1340177,1339812,1339649,1338653,1338436,1338183,1336515	Gene ID= ENSG00000107404.19 TPM= 16.54 Transcript Type= NA
chr1	1335276	1349112	1335276	1349112	-	ENST00000378891.9@DVL1	ENST00000378891.9	protein_coding	1348896,1342689,1342363,1342053,1341667,1340410,1340247,1340038,1339736,1339582,1339362,1338522,1338269,1337977,1335276	1349112,1342758,1342484,1342156,1341805,1340503,1340316,1340177,1339812,1339649,1339439,1338653,1338436,1338183,1336515	Gene ID= ENSG00000107404.19 TPM= 48.36 Transcript Type= protein_coding
chr1	1335276	1349350	1335276	1349350	-	ENST00000378888.9@DVL1	ENST00000378888.9	protein_coding	1348896,1342689,1342363,1342053,1341667,1340410,1340247,1340038,1339736,1339582,1339287,1338522,1338269,1337977,1335276	1349350,1342758,1342484,1342156,1341805,1340503,1340316,1340177,1339812,1339649,1339439,1338653,1338436,1338183,1336515	Gene ID= ENSG00000107404.19 TPM= 40.19 Transcript Type= protein_coding
chr1	1352689	1358794	1352689	1358794	-	ENST00000342753.8@MXRA8	ENST00000342753.8	protein_coding	1358456,1356681,1355244,1354682,1354354,1354193,1354030,1353848,1352689	1358794,1356704,1355345,1355152,1354509,1354232,1354106,1353928,1353629	Gene ID= ENSG00000162576.16 TPM= 22.42 Transcript Type= protein_coding
chr1	1352691	1358562	1352691	1358562	-	transcript317.chr1.nic@MXRA8	transcript317.chr1.nic	protein_coding	1358456,1356681,1355450,1355244,1354682,1354193,1354030,1353848,1352691	1358562,1356704,1355752,1355345,1355152,1354509,1354106,1353928,1353629	Gene ID= ENSG00000162576.16 TPM= 11.91 Transcript Type= NA
chr1	1352691	1358578	1352691	1358578	-	transcript320.chr1.nic@MXRA8	transcript320.chr1.nic	protein_coding	1358456,1356681,1355450,1355244,1354682,1354354,1354193,1354030,1352691	1358578,1356704,1355752,1355345,1355152,1354509,1354232,1354106,1353928	Gene ID= ENSG00000162576.16 TPM= 13.43 Transcript Type= NA
chr1	1352691	1358535	1352691	1358535	-	ENST00000309212.10@MXRA8	ENST00000309212.10	protein_coding	1358456,1356681,1355450,1355244,1354682,1354354,1354193,1354030,1353848,1352691	1358535,1356704,1355752,1355345,1355152,1354509,1354232,1354106,1353928,1353629	Gene ID= ENSG00000162576.16 TPM= 230.25 Transcript Type= protein_coding
chr1	1352689	1354264	1352689	1354264	-	ENST00000474033.5@MXRA8	ENST00000474033.5	protein_coding	1354193,1354030,1353848,1352689	1354264,1354106,1353928,1353629	Gene ID= ENSG00000162576.16 TPM= 38.76 Transcript Type= retained_intron
chr1	1352692	1358543	1352692	1358543	-	ENST00000445648.5@MXRA8	ENST00000445648.5	protein_coding	1358456,1356681,1355450,1355244,1354682,1354354,1354193,1354030,1353848,1352692	1358543,1356704,1355752,1355345,1355152,1354509,1354232,1354106,1353946,1353332	Gene ID= ENSG00000162576.16 TPM= 4.67 Transcript Type= protein_coding
chr1	1357213	1357875	1357213	1357875	+	transcript329.chr1.nnic@NA	transcript329.chr1.nnic	NA	1357213	1357875	Gene ID= novel_gene_chr1_330 TPM= 2.34 Transcript Type= NA
chr1	1373728	1375207	1373728	1375207	-	transcript339.chr1.nnic@NA	transcript339.chr1.nnic	NA	1373728	1375207	Gene ID= novel_gene_chr1_340 TPM= 3.5 Transcript Type= NA
chr1	1373732	1375169	1373732	1375169	-	ENST00000321751.9@AURKAIP1	ENST00000321751.9	protein_coding	1375075,1374705,1374000,1373732	1375169,1374790,1374445,1373902	Gene ID= ENSG00000175756.13 TPM= 10.89 Transcript Type= protein_coding
chr1	1373730	1375495	1373730	1375495	-	ENST00000338338.9@AURKAIP1	ENST00000338338.9	protein_coding	1375154,1374705,1374000,1373730	1375495,1374790,1374445,1373902	Gene ID= ENSG00000175756.13 TPM= 79.78 Transcript Type= protein_coding
chr1	1373730	1375157	1373730	1375157	-	ENST00000338370.7@AURKAIP1	ENST00000338370.7	protein_coding	1374705,1374000,1373730	1375157,1374445,1373902	Gene ID= ENSG00000175756.13 TPM= 13.23 Transcript Type= protein_coding
chr1	1373737	1375173	1373737	1375173	-	ENST00000378853.3@AURKAIP1	ENST00000378853.3	protein_coding	1374997,1374705,1374000,1373737	1375173,1374790,1374445,1373902	Gene ID= ENSG00000175756.13 TPM= 43.2 Transcript Type= protein_coding
chr1	1386502	1399331	1386502	1399331	-	transcript354.chr1.nic@CCNL2	transcript354.chr1.nic	protein_coding	1399019,1398597,1398233,1395394,1393396,1392679,1390766,1390459,1390230,1387954,1387777,1386502	1399331,1398671,1398342,1395514,1393460,1392803,1391575,1390563,1390371,1388065,1387869,1387582	Gene ID= ENSG00000221978.11 TPM= 18.97 Transcript Type= NA
chr1	1386502	1399389	1386502	1399389	-	transcript370.chr1.nic@CCNL2	transcript370.chr1.nic	protein_coding	1399019,1398597,1398233,1395394,1393396,1390766,1390459,1390230,1387954,1387777,1386502	1399389,1398671,1398342,1395514,1393460,1392803,1390563,1390371,1388065,1387869,1387582	Gene ID= ENSG00000221978.11 TPM= 35.47 Transcript Type= NA
chr1	1386495	1399312	1386495	1399312	-	ENST00000400809.7@CCNL2	ENST00000400809.7	protein_coding	1399019,1398597,1398233,1395394,1393396,1390766,1390459,1390230,1387954,1387777,1386495	1399312,1398671,1398342,1395514,1393460,1390865,1390563,1390371,1388065,1387869,1387582	Gene ID= ENSG00000221978.11 TPM= 5.84 Transcript Type= protein_coding
chr1	1386708	1399311	1386708	1399311	-	ENST00000481223.6@CCNL2	ENST00000481223.6	protein_coding	1399019,1398597,1398233,1395394,1393396,1392790,1390766,1390459,1390230,1387954,1387777,1386708	1399311,1398671,1398342,1395514,1393460,1392803,1391575,1390563,1390371,1388065,1387869,1387582	Gene ID= ENSG00000221978.11 TPM= 16.49 Transcript Type= nonsense_mediated_decay
chr1	1392288	1399317	1392288	1399317	-	ENST00000408918.8@CCNL2	ENST00000408918.8	protein_coding	1399019,1398597,1398233,1395394,1393396,1392288	1399317,1398671,1398342,1395514,1393460,1392803	Gene ID= ENSG00000221978.11 TPM= 2.34 Transcript Type= protein_coding
chr1	1399515	1403861	1399515	1403861	+	transcript385.chr1.nnic@AL391244.1	transcript385.chr1.nnic	processed_transcript	1399515,1400158,1400605,1403496	1399689,1400303,1402695,1403861	Gene ID= ENSG00000224870.6 TPM= 3.5 Transcript Type= NA
chr1	1399568	1402029	1399568	1402029	+	transcript390.chr1.nnic@AL391244.1	transcript390.chr1.nnic	processed_transcript	1399568,1400158,1400605	1399689,1400249,1402029	Gene ID= ENSG00000224870.6 TPM= 2.92 Transcript Type= NA
chr1	1399527	1402046	1399527	1402046	+	ENST00000444362.2@AL391244.1	ENST00000444362.2	processed_transcript	1399527,1400158,1400605	1399685,1400303,1402046	Gene ID= ENSG00000224870.6 TPM= 12.26 Transcript Type= antisense_RNA
chr1	1399806	1402033	1399806	1402033	+	ENST00000572242.1@AL391244.1	ENST00000572242.1	processed_transcript	1399806	1402033	Gene ID= ENSG00000224870.6 TPM= 1.75 Transcript Type= retained_intron
chr1	1399530	1402026	1399530	1402026	+	ENST00000418833.2@AL391244.1	ENST00000418833.2	processed_transcript	1399530,1400605	1400303,1402026	Gene ID= ENSG00000224870.6 TPM= 5.25 Transcript Type= retained_intron
chr1	1401908	1407281	1401908	1407281	-	transcript384.chr1.nic@MRPL20	transcript384.chr1.nic	protein_coding	1407131,1406909,1406226,1405809,1401908	1407281,1407019,1406346,1405886,1402256	Gene ID= ENSG00000242485.5 TPM= 2.34 Transcript Type= NA
chr1	1401908	1407260	1401908	1407260	-	transcript386.chr1.nic@MRPL20	transcript386.chr1.nic	protein_coding	1407131,1406226,1405809,1401908	1407260,1407019,1405886,1402256	Gene ID= ENSG00000242485.5 TPM= 2.34 Transcript Type= NA
chr1	1401908	1407313	1401908	1407313	-	ENST00000344843.11@MRPL20	ENST00000344843.11	protein_coding	1407131,1406909,1405809,1401908	1407313,1407019,1405886,1402256	Gene ID= ENSG00000242485.5 TPM= 46.7 Transcript Type= protein_coding
chr1	1418422	1421444	1418422	1421444	-	ENST00000537107.5@ANKRD65	ENST00000537107.5	protein_coding	1421133,1420797,1420052,1418422	1421444,1421005,1420592,1419549	Gene ID= ENSG00000235098.8 TPM= 8.29 Transcript Type= protein_coding
chr1	1418420	1421293	1418420	1421293	-	transcript402.chr1.nnic@ANKRD65	transcript402.chr1.nnic	protein_coding	1421100,1420797,1418420	1421293,1421005,1419549	Gene ID= ENSG00000235098.8 TPM= 3.04 Transcript Type= NA
chr1	1418420	1421769	1418420	1421769	-	ENST00000427211.3@ANKRD65	ENST00000427211.3	protein_coding	1421133,1420797,1418420	1421769,1421005,1419549	Gene ID= ENSG00000235098.8 TPM= 5.37 Transcript Type= protein_coding
chr1	1418420	1421444	1418420	1421444	-	ENST00000520296.5@ANKRD65	ENST00000520296.5	protein_coding	1421133,1420816,1418420	1421444,1421005,1419549	Gene ID= ENSG00000235098.8 TPM= 1.87 Transcript Type= protein_coding
chr1	1418420	1421340	1418420	1421340	-	transcript407.chr1.nic@ANKRD65	transcript407.chr1.nic	protein_coding	1420816,1418420	1421340,1419549	Gene ID= ENSG00000235098.8 TPM= 3.04 Transcript Type= NA
chr1	1418420	1421345	1418420	1421345	-	transcript408.chr1.nic@ANKRD65	transcript408.chr1.nic	protein_coding	1421133,1418420	1421345,1421005	Gene ID= ENSG00000235098.8 TPM= 8.17 Transcript Type= NA
chr1	1418422	1421301	1418422	1421301	-	transcript409.chr1.nic@ANKRD65	transcript409.chr1.nic	protein_coding	1420052,1418422	1421301,1419549	Gene ID= ENSG00000235098.8 TPM= 8.76 Transcript Type= NA
chr1	1435676	1440765	1435676	1440765	+	transcript418.chr1.nnic@VWA1	transcript418.chr1.nnic	protein_coding	1435676,1439081	1435821,1440765	Gene ID= ENSG00000179403.11 TPM= 3.5 Transcript Type= NA
chr1	1435523	1440765	1435523	1440765	+	ENST00000338660.5@VWA1	ENST00000338660.5	protein_coding	1435523,1437322,1439081	1435821,1437484,1440765	Gene ID= ENSG00000179403.11 TPM= 101.58 Transcript Type= protein_coding
chr1	1435671	1442882	1435671	1442882	+	ENST00000476993.1@VWA1	ENST00000476993.1	protein_coding	1435671,1436927,1439081	1435821,1437484,1442882	Gene ID= ENSG00000179403.11 TPM= 8.17 Transcript Type= protein_coding
chr1	1471757	1496202	1471757	1496202	+	transcript420.chr1.nnic@ATAD3B	transcript420.chr1.nnic	protein_coding	1471757,1477274,1477751,1478644,1479049,1480867,1482138,1482545,1485016,1485782,1486110,1486544,1487863,1489204,1489692,1490563,1495485	1472089,1477350,1477848,1478745,1479108,1480936,1482303,1482614,1485171,1485838,1486235,1486668,1487914,1489274,1490424,1490671,1496202	Gene ID= ENSG00000160072.19 TPM= 4.85 Transcript Type= NA
chr1	1471757	1496202	1471757	1496202	+	transcript421.chr1.nnic@ATAD3B	transcript421.chr1.nnic	protein_coding	1471757,1477274,1477751,1478644,1479049,1480867,1482138,1482545,1485016,1485782,1486110,1486544,1487863,1489204,1490257,1490563,1495485	1472089,1477350,1477848,1478745,1479108,1480936,1482303,1482614,1485171,1485838,1486235,1486668,1487914,1489274,1490424,1490671,1496202	Gene ID= ENSG00000160072.19 TPM= 5.14 Transcript Type= NA
chr1	1462442	1496202	1462442	1496202	+	transcript432.chr1.nnic@ATAD3B	transcript432.chr1.nnic	protein_coding	1462442,1477274,1477751,1479049,1480867,1482138,1482545,1485016,1485782,1486110,1486544,1487863,1489204,1490257,1490563,1495485	1462708,1477350,1478745,1479108,1480936,1482303,1482614,1485171,1485838,1486235,1486668,1487914,1489274,1490424,1490671,1496202	Gene ID= ENSG00000160072.19 TPM= 6.89 Transcript Type= NA
chr1	1471757	1496202	1471757	1496202	+	transcript433.chr1.nnic@ATAD3B	transcript433.chr1.nnic	protein_coding	1471757,1477274,1477751,1479049,1480867,1482138,1482545,1485016,1485782,1486110,1486544,1487863,1489204,1489692,1490563,1495485	1472089,1477350,1478745,1479108,1480936,1482303,1482614,1485171,1485838,1486235,1486668,1487914,1489274,1490424,1490671,1496202	Gene ID= ENSG00000160072.19 TPM= 4.38 Transcript Type= NA
chr1	1471757	1496202	1471757	1496202	+	transcript434.chr1.nnic@ATAD3B	transcript434.chr1.nnic	protein_coding	1471757,1477274,1477751,1479049,1480867,1482138,1482545,1485016,1485782,1486110,1486544,1487863,1489204,1490257,1490563,1495485	1472089,1477350,1478745,1479108,1480936,1482303,1482614,1485171,1485838,1486235,1486668,1487914,1489274,1490424,1490671,1496202	Gene ID= ENSG00000160072.19 TPM= 10.39 Transcript Type= NA
chr1	1471757	1496202	1471757	1496202	+	transcript443.chr1.nnic@ATAD3B	transcript443.chr1.nnic	protein_coding	1471757,1477274,1477751,1479049,1480867,1482138,1482545,1485016,1485782,1486110,1486544,1487863,1489204,1490563,1495485	1472089,1477350,1478745,1479108,1480936,1482303,1482614,1485171,1485838,1486235,1486668,1487914,1490424,1490671,1496202	Gene ID= ENSG00000160072.19 TPM= 11.38 Transcript Type= NA
chr1	1471757	1496202	1471757	1496202	+	transcript451.chr1.nic@ATAD3B	transcript451.chr1.nic	protein_coding	1471757,1477274,1479049,1480867,1482138,1482545,1485016,1485782,1486110,1486544,1487863,1489204,1490563,1495485	1472089,1478745,1479108,1480936,1482303,1482614,1485171,1485838,1486235,1486668,1487914,1490424,1490671,1496202	Gene ID= ENSG00000160072.19 TPM= 4.38 Transcript Type= NA
chr1	1471813	1483145	1471813	1483145	+	transcript458.chr1.nnic@ATAD3B	transcript458.chr1.nnic	protein_coding	1471813,1477274,1477751,1478644,1479049,1480867,1482138,1482545	1472089,1477350,1477848,1478745,1479108,1480936,1482303,1483145	Gene ID= ENSG00000160072.19 TPM= 4.67 Transcript Type= NA
chr1	1471757	1483145	1471757	1483145	+	transcript459.chr1.nnic@ATAD3B	transcript459.chr1.nnic	protein_coding	1471757,1477274,1477751,1479049,1480867,1482138,1482545	1472089,1477350,1478745,1479108,1480936,1482303,1483145	Gene ID= ENSG00000160072.19 TPM= 2.34 Transcript Type= NA
chr1	1471757	1483145	1471757	1483145	+	transcript463.chr1.nnic@ATAD3B	transcript463.chr1.nnic	protein_coding	1471757,1477274,1477751,1480867,1482138,1482545	1472089,1477350,1479108,1480936,1482303,1483145	Gene ID= ENSG00000160072.19 TPM= 2.34 Transcript Type= NA
chr1	1471769	1496202	1471769	1496202	+	ENST00000308647.7@ATAD3B	ENST00000308647.7	protein_coding	1471769,1477274,1478644,1479049,1480867,1482138,1482545,1485016,1485782,1486110,1486544,1487863,1489204,1490257,1490563,1495485	1472089,1477350,1478745,1479108,1480936,1482303,1482614,1485171,1485838,1486235,1486668,1487914,1489274,1490424,1490671,1496202	Gene ID= ENSG00000160072.19 TPM= 14.48 Transcript Type= protein_coding
chr1	1511283	1511965	1511283	1511965	-	transcript469.chr1.nnic@NA	transcript469.chr1.nnic	NA	1511283	1511965	Gene ID= novel_gene_chr1_470 TPM= 3.5 Transcript Type= NA
chr1	1512143	1534685	1512143	1534685	+	transcript430.chr1.nnic@ATAD3A	transcript430.chr1.nnic	protein_coding	1512143,1512326,1516012,1517311,1517716,1518921,1520141,1520548,1522744,1523511,1523839,1524273,1525240,1526461,1527695,1529223,1533926	1512239,1512473,1516088,1517412,1517775,1518990,1520306,1520617,1522899,1523567,1523964,1524397,1525291,1526531,1527862,1529331,1534685	Gene ID= ENSG00000197785.13 TPM= 8.85 Transcript Type= NA
chr1	1512141	1534685	1512141	1534685	+	transcript441.chr1.nnic@ATAD3A	transcript441.chr1.nnic	protein_coding	1512141,1516012,1517311,1517716,1518921,1520141,1520548,1522744,1523511,1523839,1524273,1525240,1526461,1527695,1529223,1533926	1512473,1516088,1517412,1517775,1518990,1520306,1520617,1522899,1523567,1523964,1524397,1525291,1526531,1527809,1529331,1534685	Gene ID= ENSG00000197785.13 TPM= 4.96 Transcript Type= NA
chr1	1512141	1534685	1512141	1534685	+	transcript448.chr1.nic@ATAD3A	transcript448.chr1.nic	protein_coding	1512141,1516012,1517311,1517716,1518921,1520141,1520548,1522744,1523511,1523839,1524273,1526461,1527695,1529223,1533926	1512473,1516088,1517412,1517775,1518990,1520306,1520617,1522899,1523567,1523964,1525291,1526531,1527862,1529331,1534685	Gene ID= ENSG00000197785.13 TPM= 5.35 Transcript Type= NA
chr1	1512141	1521329	1512141	1521329	+	transcript460.chr1.nic@ATAD3A	transcript460.chr1.nic	protein_coding	1512141,1516012,1517311,1517716,1518921,1520141,1520548	1512473,1516088,1517412,1517775,1518990,1520306,1521329	Gene ID= ENSG00000197785.13 TPM= 3.5 Transcript Type= NA
chr1	1512151	1534685	1512151	1534685	+	ENST00000378756.7@ATAD3A	ENST00000378756.7	protein_coding	1512151,1516012,1517311,1517716,1518921,1520141,1520548,1522744,1523511,1523839,1524273,1525240,1526461,1527695,1529223,1533926	1512473,1516088,1517412,1517775,1518990,1520306,1520617,1522899,1523567,1523964,1524397,1525291,1526531,1527862,1529331,1534685	Gene ID= ENSG00000197785.13 TPM= 67.23 Transcript Type= protein_coding
chr1	1541673	1574902	1541673	1574902	-	transcript476.chr1.nic@SSU72	transcript476.chr1.nic	protein_coding	1574478,1564773,1544863,1541673	1574902,1564916,1545002,1543987	Gene ID= ENSG00000160075.11 TPM= 6.42 Transcript Type= NA
chr1	1541673	1574869	1541673	1574869	-	ENST00000291386.3@SSU72	ENST00000291386.3	protein_coding	1574478,1564773,1544863,1543869,1541673	1574869,1564916,1545002,1543987,1542167	Gene ID= ENSG00000160075.11 TPM= 232.35 Transcript Type= protein_coding
chr1	1556445	1558218	1556445	1558218	+	transcript482.chr1.nnic@NA	transcript482.chr1.nnic	NA	1556445	1558218	Gene ID= novel_gene_chr1_483 TPM= 7.01 Transcript Type= NA
chr1	1598012	1600096	1598012	1600096	-	ENST00000422725.3@FNDC10	ENST00000422725.3	protein_coding	1598012	1600096	Gene ID= ENSG00000228594.3 TPM= 44.37 Transcript Type= protein_coding
chr1	1613758	1615795	1613758	1615795	-	ENST00000607222.1@AL691432.2	ENST00000607222.1	antisense_RNA	1613758	1615795	Gene ID= ENSG00000272106.1 TPM= 18.68 Transcript Type= antisense_RNA
chr1	1615421	1630610	1615421	1630610	+	ENST00000355826.9@MIB2	ENST00000355826.9	protein_coding	1615421,1616508,1623431,1623774,1624795,1624991,1625286,1625546,1626650,1626837,1627074,1627296,1627673,1628019,1628273,1628489,1629133,1629385,1629639,1630292	1615633,1616614,1623699,1623945,1624901,1625185,1625428,1625653,1626754,1626999,1627207,1627444,1627829,1628179,1628399,1628722,1629311,1629566,1629704,1630610	Gene ID= ENSG00000197530.12 TPM= 41.92 Transcript Type= protein_coding
chr1	1615822	1630605	1615822	1630605	+	transcript509.chr1.nic@MIB2	transcript509.chr1.nic	protein_coding	1615822,1616508,1623389,1623774,1624795,1624991,1625286,1625546,1626650,1626837,1627074,1627296,1627673,1628019,1628273,1628489,1629133,1629385,1629639,1630292	1616100,1616614,1623699,1623945,1624901,1625185,1625428,1625653,1626754,1626999,1627207,1627444,1627829,1628179,1628399,1628722,1629311,1629566,1629704,1630605	Gene ID= ENSG00000197530.12 TPM= 40.81 Transcript Type= NA
chr1	1615822	1630605	1615822	1630605	+	transcript514.chr1.nic@MIB2	transcript514.chr1.nic	protein_coding	1615822,1616508,1623431,1623774,1624795,1624991,1625286,1625546,1626650,1626837,1627074,1627296,1627673,1628019,1628273,1628489,1629133,1629385,1629639,1630292	1616100,1616614,1623699,1623945,1624901,1625185,1625428,1625653,1626754,1626999,1627207,1627444,1627829,1628179,1628399,1628722,1629311,1629566,1629704,1630605	Gene ID= ENSG00000197530.12 TPM= 33.8 Transcript Type= NA
chr1	1615443	1630605	1615443	1630605	+	ENST00000505820.6@MIB2	ENST00000505820.6	protein_coding	1615443,1616508,1623389,1623774,1624795,1624991,1625286,1625546,1626650,1626837,1627074,1627296,1627673,1628019,1628273,1628489,1629133,1629385,1629639,1630292	1615633,1616614,1623699,1623945,1624901,1625185,1625428,1625653,1626754,1626999,1627207,1627444,1627829,1628179,1628399,1628722,1629311,1629566,1629704,1630605	Gene ID= ENSG00000197530.12 TPM= 20.96 Transcript Type= protein_coding
chr1	1615496	1630604	1615496	1630604	+	ENST00000489635.5@MIB2	ENST00000489635.5	protein_coding	1615496,1616508,1623389,1623774,1624795,1624991,1625286,1625546,1626650,1626837,1627074,1627296,1627673,1628019,1628273,1628489,1629133,1629385,1629639,1630292	1615633,1616614,1623482,1623945,1624901,1625185,1625428,1625653,1626754,1626999,1627207,1627444,1627829,1628179,1628399,1628722,1629311,1629566,1629704,1630604	Gene ID= ENSG00000197530.12 TPM= 6.22 Transcript Type= nonsense_mediated_decay
chr1	1615514	1630604	1615514	1630604	+	ENST00000511502.5@MIB2	ENST00000511502.5	protein_coding	1615514,1616508,1623389,1623774,1624795,1624991,1625286,1625546,1626650,1626837,1627074,1627296,1627673,1628019,1628489,1629133,1629385,1629639,1630292	1615633,1616614,1623699,1623945,1624901,1625185,1625428,1625653,1626754,1626999,1627207,1627444,1627829,1628399,1628722,1629311,1629566,1629704,1630604	Gene ID= ENSG00000197530.12 TPM= 5.63 Transcript Type= retained_intron
chr1	1615454	1630604	1615454	1630604	+	ENST00000479659.5@MIB2	ENST00000479659.5	protein_coding	1615454,1616508,1623431,1623774,1624795,1624991,1625286,1625546,1626837,1627074,1627296,1627673,1628019,1628273,1628489,1629133,1629385,1629639,1630292	1615633,1616614,1623699,1623945,1624901,1625185,1625428,1626754,1626999,1627207,1627444,1627829,1628179,1628399,1628722,1629311,1629566,1629704,1630604	Gene ID= ENSG00000197530.12 TPM= 7.17 Transcript Type= retained_intron
chr1	1616310	1630604	1616310	1630604	+	ENST00000504599.5@MIB2	ENST00000504599.5	protein_coding	1616310,1623389,1623774,1624795,1624991,1625286,1625546,1626650,1626837,1627074,1627296,1627673,1628019,1628273,1628489,1629133,1629385,1629639,1630292	1616614,1623699,1623945,1624901,1625185,1625428,1625653,1626754,1626999,1627207,1627444,1627829,1628179,1628399,1628722,1629311,1629566,1629704,1630604	Gene ID= ENSG00000197530.12 TPM= 5.56 Transcript Type= protein_coding
chr1	1615855	1617321	1615855	1617321	+	transcript627.chr1.nnic@NA	transcript627.chr1.nnic	NA	1615855	1617321	Gene ID= novel_gene_chr1_628 TPM= 3.5 Transcript Type= NA
chr1	1624757	1626312	1624757	1626312	-	transcript619.chr1.nnic@NA	transcript619.chr1.nnic	NA	1625650,1624757	1626312,1625377	Gene ID= novel_gene_chr1_620 TPM= 4.67 Transcript Type= NA
chr1	1624762	1627218	1624762	1627218	-	transcript631.chr1.nnic@NA	transcript631.chr1.nnic	NA	1624762	1627218	Gene ID= novel_gene_chr1_632 TPM= 8.17 Transcript Type= NA
chr1	1632095	1634654	1632095	1634654	+	ENST00000356026.9@MMP23B	ENST00000356026.9	protein_coding	1632095,1632783,1632981,1633188,1633748,1633989,1634202,1634451	1632374,1632913,1633120,1633355,1633912,1634099,1634328,1634654	Gene ID= ENSG00000189409.13 TPM= 26.85 Transcript Type= protein_coding
chr1	1632160	1634654	1632160	1634654	+	transcript585.chr1.nic@MMP23B	transcript585.chr1.nic	protein_coding	1632160,1632710,1632981,1633188,1633748,1633989,1634202,1634451	1632374,1632913,1633120,1633355,1633912,1634099,1634328,1634654	Gene ID= ENSG00000189409.13 TPM= 3.5 Transcript Type= NA
chr1	1632112	1634654	1632112	1634654	+	transcript590.chr1.nic@MMP23B	transcript590.chr1.nic	protein_coding	1632112,1632783,1632981,1633188,1633989,1634202,1634451	1632374,1632913,1633120,1633912,1634099,1634328,1634654	Gene ID= ENSG00000189409.13 TPM= 4.67 Transcript Type= NA
chr1	1632179	1634654	1632179	1634654	+	ENST00000378675.7@MMP23B	ENST00000378675.7	protein_coding	1632179,1632783,1632981,1633748,1633989,1634202,1634451	1632374,1632913,1633355,1633912,1634099,1634328,1634654	Gene ID= ENSG00000189409.13 TPM= 5.84 Transcript Type= protein_coding
chr1	1633679	1634604	1633679	1634604	+	ENST00000489782.1@MMP23B	ENST00000489782.1	protein_coding	1633679,1633989,1634202,1634451	1633912,1634099,1634328,1634604	Gene ID= ENSG00000189409.13 TPM= 4.67 Transcript Type= retained_intron
chr1	1634240	1635263	1634240	1635263	+	ENST00000490017.1@MMP23B	ENST00000490017.1	protein_coding	1634240,1634451,1635159	1634328,1634786,1635263	Gene ID= ENSG00000189409.13 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr1	1635587	1659012	1635587	1659012	-	ENST00000407249.7@CDK11B	ENST00000407249.7	protein_coding	1658914,1657375,1655369,1652439,1649499,1645126,1642347,1641906,1641662,1641048,1640277,1638500,1637762,1637408,1637081,1636897,1636682,1636333,1635937,1635587	1659012,1657498,1655484,1652566,1649637,1645262,1642508,1642001,1641820,1641113,1640452,1638590,1637883,1637513,1637202,1637004,1636798,1636481,1636126,1635856	Gene ID= ENSG00000248333.8 TPM= 18.1 Transcript Type= protein_coding
chr1	1635587	1638456	1635587	1638456	-	transcript635.chr1.nnic@NA	transcript635.chr1.nnic	NA	1635587	1638456	Gene ID= novel_gene_chr1_636 TPM= 4.09 Transcript Type= NA
chr1	1661479	1692728	1661479	1692728	-	ENST00000611123.1@SLC35E2B	ENST00000611123.1	protein_coding	1692449,1676378,1676064,1675463,1671509,1670098,1669664,1668327,1661479	1692728,1676846,1676199,1675590,1671629,1670151,1669736,1668472,1666019	Gene ID= ENSG00000189339.11 TPM= 74.73 Transcript Type= protein_coding
chr1	1698626	1700762	1698626	1700762	-	transcript633.chr1.nnic@NA	transcript633.chr1.nnic	NA	1698626	1700762	Gene ID= novel_gene_chr1_634 TPM= 5.84 Transcript Type= NA
chr1	1727385	1745782	1727385	1745782	-	transcript599.chr1.nnic@SLC35E2	transcript599.chr1.nnic	protein_coding	1745724,1739236,1738922,1738321,1734690,1727385	1745782,1739704,1739057,1738448,1734835,1729680	Gene ID= ENSG00000215790.6 TPM= 3.5 Transcript Type= NA
chr1	1729894	1731395	1729894	1731395	+	transcript625.chr1.nnic@NA	transcript625.chr1.nnic	NA	1729894	1731395	Gene ID= novel_gene_chr1_626 TPM= 14.01 Transcript Type= NA
chr1	1751232	1778478	1751232	1778478	-	transcript645.chr1.nic@NADK	transcript645.chr1.nic	protein_coding	1778289,1765228,1761952,1757181,1756779,1756503,1756258,1755374,1754544,1754284,1754051,1753567,1751232	1778478,1765446,1762035,1757310,1756882,1756608,1756343,1755476,1754698,1754383,1754208,1753649,1753060	Gene ID= ENSG00000008130.15 TPM= 11.47 Transcript Type= NA
chr1	1751232	1780089	1751232	1780089	-	transcript660.chr1.nic@NADK	transcript660.chr1.nic	protein_coding	1779905,1765228,1761952,1757181,1756503,1756258,1755374,1754544,1754284,1754051,1753567,1751232	1780089,1765446,1762035,1757310,1756608,1756343,1755476,1754698,1754383,1754208,1753649,1753060	Gene ID= ENSG00000008130.15 TPM= 28.4 Transcript Type= NA
chr1	1751232	1778470	1751232	1778470	-	ENST00000341426.9@NADK	ENST00000341426.9	protein_coding	1778289,1765228,1761952,1757181,1756503,1756258,1755374,1754544,1754284,1754051,1753567,1751232	1778470,1765446,1762035,1757310,1756608,1756343,1755476,1754698,1754383,1754208,1753649,1753060	Gene ID= ENSG00000008130.15 TPM= 90.28 Transcript Type= protein_coding
chr1	1785288	1891104	1785288	1891104	-	transcript695.chr1.nic@GNB1	transcript695.chr1.nic	protein_coding	1890820,1839190,1825397,1817837,1815756,1806475,1804419,1793245,1790395,1789053,1785288	1891104,1839238,1825499,1817875,1815862,1806538,1804581,1793311,1790596,1789269,1787437	Gene ID= ENSG00000078369.17 TPM= 32.2 Transcript Type= NA
chr1	1785285	1891117	1785285	1891117	-	ENST00000610897.4@GNB1	ENST00000610897.4	protein_coding	1890820,1825397,1817837,1815756,1806475,1804419,1793245,1790395,1789053,1787322,1785285	1891117,1825499,1817875,1815862,1806538,1804581,1793311,1790596,1789269,1787437,1787053	Gene ID= ENSG00000078369.17 TPM= 105.18 Transcript Type= protein_coding
chr1	1785286	1891056	1785286	1891056	-	ENST00000378609.8@GNB1	ENST00000378609.8	protein_coding	1890820,1839190,1825397,1817837,1815756,1806475,1804419,1793245,1790395,1789053,1787322,1785286	1891056,1839238,1825499,1817875,1815862,1806538,1804581,1793311,1790596,1789269,1787437,1787053	Gene ID= ENSG00000078369.17 TPM= 558.2 Transcript Type= protein_coding
chr1	1785285	1891117	1785285	1891117	-	ENST00000615252.4@GNB1	ENST00000615252.4	protein_coding	1890820,1839190,1825397,1806475,1804419,1793245,1790395,1789053,1787322,1785285	1891117,1839238,1825499,1806538,1804581,1793311,1790596,1789269,1787437,1787053	Gene ID= ENSG00000078369.17 TPM= 3.75 Transcript Type= protein_coding
chr1	1859644	1861126	1859644	1861126	+	transcript730.chr1.nnic@NA	transcript730.chr1.nnic	NA	1859644	1861126	Gene ID= novel_gene_chr1_731 TPM= 8.17 Transcript Type= NA
chr1	2019298	2030758	2019298	2030758	+	ENST00000378585.6@GABRD	ENST00000378585.6	protein_coding	2019298,2024942,2025334,2025518,2027577,2028155,2029111,2029551,2029983	2019491,2025054,2025401,2025738,2027659,2028292,2029266,2029762,2030758	Gene ID= ENSG00000187730.8 TPM= 3.5 Transcript Type= protein_coding
chr1	2050728	2185395	2050728	2185395	+	transcript752.chr1.nic@PRKCZ	transcript752.chr1.nic	protein_coding	2050728,2055441,2056484,2059541,2135262,2144210,2146027,2148872,2150790,2155995,2169518,2172055,2172301,2173897,2174754,2175224,2184583,2184922	2051012,2055562,2056573,2059591,2135347,2144341,2146108,2148924,2150978,2156092,2169604,2172190,2172388,2174016,2174833,2175313,2184698,2185395	Gene ID= ENSG00000067606.16 TPM= 35.76 Transcript Type= NA
chr1	2050470	2185395	2050470	2185395	+	ENST00000378567.7@PRKCZ	ENST00000378567.7	protein_coding	2050470,2055441,2056484,2059541,2135262,2144210,2146027,2148872,2150790,2155995,2169518,2172055,2172301,2173897,2174754,2175224,2184583,2184922	2050701,2055562,2056573,2059591,2135347,2144341,2146108,2148924,2150978,2156092,2169604,2172190,2172388,2174016,2174833,2175313,2184698,2185395	Gene ID= ENSG00000067606.16 TPM= 208.57 Transcript Type= protein_coding
chr1	2073329	2076755	2073329	2076755	+	transcript776.chr1.nnic@NA	transcript776.chr1.nnic	NA	2073329	2076755	Gene ID= novel_gene_chr1_777 TPM= 3.5 Transcript Type= NA
chr1	2078846	2081176	2078846	2081176	-	transcript784.chr1.nnic@NA	transcript784.chr1.nnic	NA	2078846	2081176	Gene ID= novel_gene_chr1_785 TPM= 4.67 Transcript Type= NA
chr1	2184457	2195067	2184457	2195067	-	transcript766.chr1.nnic@FAAP20	transcript766.chr1.nnic	protein_coding	2194688,2193998,2193639,2189713,2186838,2184457	2195067,2194133,2193910,2189781,2187206,2185513	Gene ID= ENSG00000162585.16 TPM= 3.5 Transcript Type= NA
chr1	2189548	2194762	2189548	2194762	-	transcript767.chr1.nic@FAAP20	transcript767.chr1.nic	protein_coding	2194688,2193998,2193639,2192845,2189548	2194762,2194133,2193910,2192975,2189781	Gene ID= ENSG00000162585.16 TPM= 2.34 Transcript Type= NA
chr1	2184478	2194775	2184478	2194775	-	ENST00000414253.5@FAAP20	ENST00000414253.5	protein_coding	2194688,2193998,2193639,2189713,2186838,2186004,2184478	2194775,2194133,2193910,2189781,2187206,2186249,2185513	Gene ID= ENSG00000162585.16 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr1	2189569	2194213	2189569	2194213	-	ENST00000476803.1@FAAP20	ENST00000476803.1	protein_coding	2193998,2193639,2189569	2194213,2193910,2189781	Gene ID= ENSG00000162585.16 TPM= 1.17 Transcript Type= processed_transcript
chr1	2189548	2194774	2189548	2194774	-	ENST00000378546.8@FAAP20	ENST00000378546.8	protein_coding	2194688,2193998,2193639,2189548	2194774,2194133,2193910,2189781	Gene ID= ENSG00000162585.16 TPM= 33.86 Transcript Type= protein_coding
chr1	2185501	2186981	2185501	2186981	+	transcript778.chr1.nnic@NA	transcript778.chr1.nnic	NA	2185501	2186981	Gene ID= novel_gene_chr1_779 TPM= 2.34 Transcript Type= NA
chr1	2211739	2214211	2211739	2214211	-	transcript787.chr1.nnic@NA	transcript787.chr1.nnic	NA	2211739	2214211	Gene ID= novel_gene_chr1_788 TPM= 2.34 Transcript Type= NA
chr1	2235047	2240618	2235047	2240618	-	transcript794.chr1.nnic@NA	transcript794.chr1.nnic	NA	2235047	2240618	Gene ID= novel_gene_chr1_795 TPM= 2.34 Transcript Type= NA
chr1	2276766	2280216	2276766	2280216	+	transcript790.chr1.nnic@NA	transcript790.chr1.nnic	NA	2276766	2280216	Gene ID= novel_gene_chr1_791 TPM= 2.34 Transcript Type= NA
chr1	2309890	2310212	2309890	2310212	+	transcript792.chr1.nnic@NA	transcript792.chr1.nnic	NA	2309890	2310212	Gene ID= novel_gene_chr1_793 TPM= 2.34 Transcript Type= NA
chr1	2350414	2352820	2350414	2352820	-	ENST00000602865.1@AL513477.1	ENST00000602865.1	transcribed_processed_pseudogene	2350414	2352820	Gene ID= ENSG00000269896.2 TPM= 1.17 Transcript Type= processed_transcript
chr1	2391804	2405442	2391804	2405442	+	transcript821.chr1.nnic@RER1	transcript821.chr1.nnic	protein_coding	2391804,2394647,2395784,2397116,2399415,2400857,2402207,2403035	2391958,2394728,2395871,2397220,2399514,2400935,2402342,2405442	Gene ID= ENSG00000157916.19 TPM= 16.35 Transcript Type= NA
chr1	2391804	2405442	2391804	2405442	+	transcript842.chr1.nnic@RER1	transcript842.chr1.nnic	protein_coding	2391804,2395784,2397116,2399415,2400857,2402207,2403035	2392126,2395871,2397220,2399514,2400935,2402342,2405442	Gene ID= ENSG00000157916.19 TPM= 18.68 Transcript Type= NA
chr1	2391833	2405444	2391833	2405444	+	ENST00000605895.5@RER1	ENST00000605895.5	protein_coding	2391833,2395784,2397116,2399415,2400857,2402207,2403035	2391958,2395871,2397220,2399514,2400935,2402342,2405444	Gene ID= ENSG00000157916.19 TPM= 107.42 Transcript Type= protein_coding
chr1	2403964	2412530	2403964	2412530	-	ENST00000288774.7@PEX10	ENST00000288774.7	protein_coding	2412391,2410371,2408452,2406720,2406484,2403964	2412530,2410451,2408858,2406955,2406619,2405834	Gene ID= ENSG00000157911.9 TPM= 3.5 Transcript Type= protein_coding
chr1	2508537	2526611	2508537	2526611	-	transcript869.chr1.nic@PANK4	transcript869.chr1.nic	protein_coding	2526464,2521718,2521101,2520723,2520322,2519801,2519143,2518516,2518164,2515562,2514354,2514002,2512888,2511628,2511338,2510678,2510057,2509862,2508537	2526611,2521800,2521315,2520906,2520414,2519954,2519324,2518597,2518264,2515717,2514466,2514089,2513039,2511683,2511387,2510748,2510157,2509930,2509060	Gene ID= ENSG00000157881.13 TPM= 9.34 Transcript Type= NA
chr1	2508533	2526628	2508533	2526628	-	ENST00000378466.7@PANK4	ENST00000378466.7	protein_coding	2526464,2521718,2521101,2520723,2520322,2519801,2519143,2518516,2518164,2515562,2514354,2514002,2512888,2511628,2511338,2510678,2510057,2509862,2508533	2526628,2521800,2521315,2520906,2520414,2519954,2519324,2518597,2518264,2515717,2514466,2514089,2513039,2511683,2511387,2510782,2510157,2509930,2509060	Gene ID= ENSG00000157881.13 TPM= 45.54 Transcript Type= protein_coding
chr1	2508537	2526611	2508537	2526611	-	transcript874.chr1.nic@PANK4	transcript874.chr1.nic	protein_coding	2526464,2521718,2521101,2520723,2520322,2519801,2519143,2518516,2518164,2515562,2514354,2514002,2512888,2511628,2511338,2510678,2510057,2508537	2526611,2521800,2521315,2520906,2520414,2519954,2519324,2518597,2518264,2515717,2514466,2514089,2513039,2511683,2511387,2510782,2510157,2509930	Gene ID= ENSG00000157881.13 TPM= 3.5 Transcript Type= NA
chr1	2528745	2530245	2528745	2530245	-	ENST00000378453.3@HES5	ENST00000378453.3	protein_coding	2530111,2529846,2528745	2530245,2530011,2529749	Gene ID= ENSG00000197921.5 TPM= 4.67 Transcript Type= protein_coding
chr1	2541619	2545351	2541619	2545351	-	transcript883.chr1.nnic@NA	transcript883.chr1.nnic	NA	2541619	2545351	Gene ID= novel_gene_chr1_884 TPM= 2.34 Transcript Type= NA
chr1	2546400	2547458	2546400	2547458	+	transcript885.chr1.nnic@NA	transcript885.chr1.nnic	NA	2546400	2547458	Gene ID= novel_gene_chr1_886 TPM= 4.67 Transcript Type= NA
chr1	2555750	2563829	2555750	2563829	+	transcript894.chr1.nic@TNFRSF14	transcript894.chr1.nic	protein_coding	2555750,2556585,2557726,2558343,2559823,2560624,2561673,2562865,2563148	2555850,2556733,2557834,2558468,2559978,2560714,2561815,2562896,2563829	Gene ID= ENSG00000157873.17 TPM= 12.84 Transcript Type= NA
chr1	2555787	2563829	2555787	2563829	+	transcript899.chr1.nic@TNFRSF14	transcript899.chr1.nic	protein_coding	2555787,2556585,2557726,2558343,2559823,2560624,2561673,2562865,2563148	2556252,2556733,2557834,2558468,2559978,2560714,2561815,2562896,2563829	Gene ID= ENSG00000157873.17 TPM= 10.51 Transcript Type= NA
chr1	2555794	2563829	2555794	2563829	+	transcript904.chr1.nic@TNFRSF14	transcript904.chr1.nic	protein_coding	2555794,2557726,2558343,2558881,2560624,2561673,2562865,2563148	2556733,2557834,2558468,2559978,2560714,2561815,2562896,2563829	Gene ID= ENSG00000157873.17 TPM= 12.26 Transcript Type= NA
chr1	2556384	2563744	2556384	2563744	+	transcript923.chr1.nic@TNFRSF14	transcript923.chr1.nic	protein_coding	2556384,2557726,2558343,2559823,2560624,2562865,2563148	2556733,2557834,2558468,2559978,2561815,2562896,2563744	Gene ID= ENSG00000157873.17 TPM= 8.17 Transcript Type= NA
chr1	2556366	2563829	2556366	2563829	+	ENST00000355716.4@TNFRSF14	ENST00000355716.4	protein_coding	2556366,2557726,2558343,2559823,2560624,2561673,2562865,2563148	2556733,2557834,2558468,2559978,2560714,2561815,2562896,2563829	Gene ID= ENSG00000157873.17 TPM= 60.71 Transcript Type= protein_coding
chr1	2586777	2591463	2586777	2591463	+	transcript943.chr1.nic@FAM213B	transcript943.chr1.nic	protein_coding	2586777,2587091,2587741,2588390,2588530,2588922,2589410	2586948,2587295,2587792,2588453,2588625,2589040,2591463	Gene ID= ENSG00000157870.14 TPM= 13.37 Transcript Type= NA
chr1	2586777	2591463	2586777	2591463	+	transcript944.chr1.nic@FAM213B	transcript944.chr1.nic	protein_coding	2586777,2587091,2587741,2588390,2588530,2588954,2589410	2586948,2587295,2587792,2588453,2588625,2589040,2591463	Gene ID= ENSG00000157870.14 TPM= 11.03 Transcript Type= NA
chr1	2586775	2591468	2586775	2591468	+	ENST00000419916.6@FAM213B	ENST00000419916.6	protein_coding	2586775,2587091,2587741,2588390,2588550,2588922,2589410	2586948,2587295,2587792,2588453,2588625,2589040,2591468	Gene ID= ENSG00000157870.14 TPM= 34.39 Transcript Type= protein_coding
chr1	2587065	2591463	2587065	2591463	+	transcript949.chr1.nic@FAM213B	transcript949.chr1.nic	protein_coding	2587065,2587741,2588390,2588550,2588922,2589410	2587295,2587792,2588453,2588625,2589040,2591463	Gene ID= ENSG00000157870.14 TPM= 13.08 Transcript Type= NA
chr1	2586798	2591463	2586798	2591463	+	ENST00000378427.5@FAM213B	ENST00000378427.5	protein_coding	2586798,2587091,2587741,2588390,2588550,2588954,2589410	2586948,2587295,2587792,2588453,2588625,2589040,2591463	Gene ID= ENSG00000157870.14 TPM= 23.88 Transcript Type= protein_coding
chr1	2590639	2594166	2590639	2594166	-	transcript951.chr1.nic@MMEL1	transcript951.chr1.nic	protein_coding	2593814,2592833,2592655,2591932,2591557,2590639	2594166,2592966,2592720,2592027,2591633,2591089	Gene ID= ENSG00000142606.15 TPM= 2.34 Transcript Type= NA
chr1	2590639	2594166	2590639	2594166	-	transcript953.chr1.nic@MMEL1	transcript953.chr1.nic	protein_coding	2593814,2592655,2591932,2591557,2590639	2594166,2592966,2592027,2591633,2591089	Gene ID= ENSG00000142606.15 TPM= 2.34 Transcript Type= NA
chr1	3064072	3068710	3064072	3068710	-	transcript959.chr1.nic@LINC00982	transcript959.chr1.nic	antisense_RNA	3068222,3067337,3064072	3068710,3068048,3064302	Gene ID= ENSG00000177133.10 TPM= 4.67 Transcript Type= NA
chr1	3069180	3406580	3069180	3406580	+	transcript962.chr1.nic@PRDM16	transcript962.chr1.nic	protein_coding	3069180,3186125,3244087,3385152,3396491,3402791,3404739,3405495	3069296,3186474,3244137,3385286,3396593,3402998,3404886,3406580	Gene ID= ENSG00000142611.16 TPM= 3.5 Transcript Type= NA
chr1	3454426	3481113	3454426	3481113	+	ENST00000378378.8@ARHGEF16	ENST00000378378.8	protein_coding	3454426,3463066,3466148,3467168,3468880,3469433,3473078,3473393,3474708,3475970,3477875,3478424,3479517,3479812,3480448	3454811,3463672,3466193,3467337,3468936,3469593,3473230,3473522,3474782,3476062,3478026,3478612,3479590,3479913,3481113	Gene ID= ENSG00000130762.14 TPM= 25.4 Transcript Type= protein_coding
chr1	3454583	3481113	3454583	3481113	+	transcript969.chr1.nnic@ARHGEF16	transcript969.chr1.nnic	protein_coding	3454583,3463066,3466148,3467168,3468880,3469433,3473078,3473393,3474708,3475970,3477875,3478424,3479517,3479812,3480448	3454844,3463672,3466193,3467337,3468936,3469593,3473230,3473522,3474782,3476062,3478026,3478612,3479590,3479913,3481113	Gene ID= ENSG00000130762.14 TPM= 7.88 Transcript Type= NA
chr1	3454530	3481113	3454530	3481113	+	transcript972.chr1.nic@ARHGEF16	transcript972.chr1.nic	protein_coding	3454530,3463066,3466148,3467168,3468880,3469433,3473078,3473393,3474708,3475970,3477875,3479517,3479812,3480448	3454811,3463672,3466193,3467337,3468936,3469593,3473230,3473522,3474782,3476062,3478612,3479590,3479913,3481113	Gene ID= ENSG00000130762.14 TPM= 3.79 Transcript Type= NA
chr1	3477804	3481113	3477804	3481113	+	transcript977.chr1.nic@ARHGEF16	transcript977.chr1.nic	protein_coding	3477804,3479812,3480448	3479590,3479913,3481113	Gene ID= ENSG00000130762.14 TPM= 2.63 Transcript Type= NA
chr1	3489920	3611502	3489920	3611502	-	transcript987.chr1.nic@MEGF6	transcript987.chr1.nic	protein_coding	3611138,3602466,3595338,3579825,3524124,3515402,3514550,3512006,3511550,3510783,3509870,3509075,3508558,3507795,3506108,3505422,3505208,3501796,3501177,3500966,3500633,3499796,3499588,3499138,3498698,3498371,3497233,3496655,3495890,3494613,3494371,3493996,3493771,3492639,3490912,3489920	3611502,3602600,3595447,3579929,3524246,3515527,3514672,3512128,3511687,3510902,3509992,3509245,3508689,3507923,3506236,3505556,3505342,3501921,3501308,3501094,3500764,3499924,3499716,3499266,3498826,3498499,3497361,3496783,3496018,3494741,3494499,3494124,3493899,3492767,3490959,3490589	Gene ID= ENSG00000162591.15 TPM= 9.34 Transcript Type= NA
chr1	3487964	3531415	3487964	3531415	-	transcript999.chr1.nic@MEGF6	transcript999.chr1.nic	protein_coding	3531080,3524124,3515402,3514550,3512006,3511550,3510783,3509870,3509075,3508558,3507795,3506108,3505422,3505208,3501796,3501177,3500966,3500633,3499796,3499588,3499138,3498698,3498371,3497233,3496655,3495890,3494613,3494371,3493996,3493771,3492639,3490912,3487964	3531415,3524246,3515527,3514672,3512128,3511687,3510902,3509992,3509245,3508689,3507923,3506236,3505556,3505342,3501921,3501308,3501094,3500764,3499924,3499716,3499266,3498826,3498499,3497361,3496783,3496018,3494741,3494499,3494124,3493899,3492767,3490959,3490589	Gene ID= ENSG00000162591.15 TPM= 22.18 Transcript Type= NA
chr1	3489926	3611495	3489926	3611495	-	ENST00000356575.8@MEGF6	ENST00000356575.8	protein_coding	3611138,3602466,3595338,3579825,3524124,3515402,3514550,3512006,3511550,3510783,3509870,3509075,3508558,3507795,3506108,3505422,3505208,3501796,3501177,3500966,3500633,3499796,3499588,3499138,3498698,3498371,3497233,3496988,3496655,3495890,3494613,3494371,3493996,3493771,3492639,3490912,3489926	3611495,3602600,3595447,3579929,3524246,3515527,3514672,3512128,3511687,3510902,3509992,3509245,3508689,3507923,3506236,3505556,3505342,3501921,3501308,3501094,3500764,3499924,3499716,3499266,3498826,3498499,3497361,3497119,3496783,3496018,3494741,3494499,3494124,3493899,3492767,3490959,3490589	Gene ID= ENSG00000162591.15 TPM= 47.87 Transcript Type= protein_coding
chr1	3625002	3630127	3625002	3630127	+	transcript1020.chr1.nnic@TPRG1L	transcript1020.chr1.nnic	protein_coding	3625002,3625713,3627500,3628409	3625144,3625889,3627653,3630127	Gene ID= ENSG00000158109.14 TPM= 7.3 Transcript Type= NA
chr1	3625002	3630127	3625002	3630127	+	ENST00000378344.6@TPRG1L	ENST00000378344.6	protein_coding	3625002,3625424,3625713,3627500,3628409	3625273,3625515,3625889,3627653,3630127	Gene ID= ENSG00000158109.14 TPM= 212.79 Transcript Type= protein_coding
chr1	3630767	3650073	3630767	3650073	-	ENST00000270708.11@WRAP73	ENST00000270708.11	protein_coding	3649931,3647408,3646666,3638750,3636995,3635944,3635160,3634997,3633398,3632213,3631466,3630767	3650073,3647560,3646782,3638822,3637098,3636030,3635294,3635074,3633503,3632338,3631657,3631117	Gene ID= ENSG00000116213.15 TPM= 33.28 Transcript Type= protein_coding
chr1	3630767	3650058	3630767	3650058	-	ENST00000378322.7@WRAP73	ENST00000378322.7	protein_coding	3649931,3647408,3646666,3638750,3636995,3635944,3635160,3634997,3633398,3632213,3630767	3650058,3647560,3646782,3638822,3637098,3636030,3635294,3635074,3633503,3632338,3631657	Gene ID= ENSG00000116213.15 TPM= 20.43 Transcript Type= protein_coding
chr1	3630770	3635786	3630770	3635786	-	transcript1030.chr1.nnic@NA	transcript1030.chr1.nnic	NA	3630770	3635786	Gene ID= novel_gene_chr1_1031 TPM= 5.84 Transcript Type= NA
chr1	3737149	3747393	3737149	3747393	-	transcript1039.chr1.nic@TP73-AS1	transcript1039.chr1.nic	transcribed_unitary_pseudogene	3745607,3743061,3742804,3742430,3740233,3737149	3747393,3743190,3742911,3742517,3740387,3738513	Gene ID= ENSG00000227372.11 TPM= 2.53 Transcript Type= NA
chr1	3737149	3747393	3737149	3747393	-	transcript1041.chr1.nic@TP73-AS1	transcript1041.chr1.nic	transcribed_unitary_pseudogene	3745607,3743061,3742804,3740233,3737149	3747393,3743190,3742911,3740387,3737854	Gene ID= ENSG00000227372.11 TPM= 3.7 Transcript Type= NA
chr1	3737149	3747393	3737149	3747393	-	transcript1043.chr1.nic@TP73-AS1	transcript1043.chr1.nic	transcribed_unitary_pseudogene	3745607,3743061,3742804,3740233,3737149	3747393,3743190,3742911,3740387,3738513	Gene ID= ENSG00000227372.11 TPM= 10.71 Transcript Type= NA
chr1	3737149	3747393	3737149	3747393	-	transcript1044.chr1.nic@TP73-AS1	transcript1044.chr1.nic	transcribed_unitary_pseudogene	3745607,3743061,3742804,3740233,3737149	3747393,3743190,3742957,3740387,3738513	Gene ID= ENSG00000227372.11 TPM= 6.04 Transcript Type= NA
chr1	3737149	3747393	3737149	3747393	-	transcript1051.chr1.nic@TP73-AS1	transcript1051.chr1.nic	transcribed_unitary_pseudogene	3745607,3743061,3742804,3737149	3747393,3743190,3742960,3740387	Gene ID= ENSG00000227372.11 TPM= 4.67 Transcript Type= NA
chr1	3737149	3747336	3737149	3747336	-	ENST00000423764.5@TP73-AS1	ENST00000423764.5	transcribed_unitary_pseudogene	3745607,3743061,3742804,3740233,3737149	3747336,3743190,3742957,3740387,3737854	Gene ID= ENSG00000227372.11 TPM= 7.2 Transcript Type= processed_transcript
chr1	3780220	3796519	3780220	3796519	-	transcript1058.chr1.nnic@LRRC47	transcript1058.chr1.nnic	protein_coding	3795862,3786849,3785087,3783996,3782661,3781512,3780460,3780220	3796519,3787310,3785203,3784111,3782763,3781601,3781336,3780419	Gene ID= ENSG00000130764.9 TPM= 5.84 Transcript Type= NA
chr1	3778558	3796504	3778558	3796504	-	ENST00000378251.2@LRRC47	ENST00000378251.2	protein_coding	3795862,3786849,3785087,3783996,3782661,3781512,3778558	3796504,3787310,3785203,3784111,3782763,3781601,3781336	Gene ID= ENSG00000130764.9 TPM= 3.5 Transcript Type= protein_coding
chr1	3814785	3857226	3814785	3857226	-	transcript1077.chr1.nnic@CEP104	transcript1077.chr1.nnic	protein_coding	3856889,3852295,3848608,3847475,3845289,3844907,3839608,3838964,3837292,3834925,3833862,3831046,3829791,3829266,3826708,3826370,3825758,3823424,3823174,3816280,3814785	3857226,3852421,3848781,3847613,3845351,3844983,3839776,3839119,3837519,3835092,3834035,3831222,3829997,3829373,3826744,3826436,3825866,3823562,3823241,3816370,3815517	Gene ID= ENSG00000116198.12 TPM= 2.34 Transcript Type= NA
chr1	3829339	3857226	3829339	3857226	-	transcript1080.chr1.nic@CEP104	transcript1080.chr1.nic	protein_coding	3856889,3852295,3848608,3847475,3845289,3844907,3839608,3838964,3837292,3836495,3834925,3833862,3831046,3829791,3829339	3857226,3852421,3848781,3847613,3845351,3844983,3839776,3839119,3837519,3836692,3835092,3834035,3831222,3829997,3829373	Gene ID= ENSG00000116198.12 TPM= 3.5 Transcript Type= NA
chr1	3849267	3857226	3849267	3857226	-	transcript1084.chr1.nic@CEP104	transcript1084.chr1.nic	protein_coding	3856889,3849267	3857226,3852421	Gene ID= ENSG00000116198.12 TPM= 4.67 Transcript Type= NA
chr1	3812081	3857199	3812081	3857199	-	ENST00000378230.7@CEP104	ENST00000378230.7	protein_coding	3856889,3852295,3848608,3847475,3845289,3844907,3839608,3838964,3837292,3836495,3834925,3833862,3831046,3829791,3829266,3826708,3826370,3825758,3823424,3823174,3816280,3812081	3857199,3852421,3848781,3847613,3845351,3844983,3839776,3839119,3837519,3836692,3835092,3834035,3831222,3829997,3829373,3826744,3826436,3825866,3823562,3823241,3816370,3815517	Gene ID= ENSG00000116198.12 TPM= 7.01 Transcript Type= protein_coding
chr1	3857281	3885429	3857281	3885429	+	ENST00000378209.7@DFFB	ENST00000378209.7	protein_coding	3857281,3858718,3865812,3867974,3869605,3872472,3883507	3857717,3858844,3866000,3868053,3869775,3872572,3885429	Gene ID= ENSG00000169598.15 TPM= 8.17 Transcript Type= protein_coding
chr1	3889125	3900300	3889125	3900300	-	transcript1093.chr1.nnic@C1orf174	transcript1093.chr1.nnic	protein_coding	3900172,3891984,3890569,3889125	3900300,3892996,3891891,3890073	Gene ID= ENSG00000198912.10 TPM= 3.5 Transcript Type= NA
chr1	3889125	3900285	3889125	3900285	-	ENST00000361605.3@C1orf174	ENST00000361605.3	protein_coding	3900172,3892883,3890569,3889125	3900285,3892996,3891057,3890073	Gene ID= ENSG00000198912.10 TPM= 53.71 Transcript Type= protein_coding
chr1	3889125	3900293	3889125	3900293	-	ENST00000474140.1@C1orf174	ENST00000474140.1	protein_coding	3900172,3890569,3889125	3900293,3892996,3890073	Gene ID= ENSG00000198912.10 TPM= 3.5 Transcript Type= retained_intron
chr1	5992363	6101193	5992363	6101193	+	ENST00000378097.5@KCNAB2	ENST00000378097.5	protein_coding	5992363,6040517,6041831,6072755,6073733,6082195,6085204,6087467,6089008,6090389,6094400,6095323,6095530,6096636,6097269,6098485	5992788,6040645,6041872,6072798,6073770,6082274,6085248,6087511,6089051,6090475,6094485,6095443,6095624,6096756,6097357,6101193	Gene ID= ENSG00000069424.14 TPM= 21.8 Transcript Type= protein_coding
chr1	6026013	6101192	6026013	6101192	+	ENST00000341524.5@KCNAB2	ENST00000341524.5	protein_coding	6026013,6040517,6041831,6072755,6073733,6082195,6085204,6087467,6089008,6090389,6094400,6095323,6095530,6096636,6097269,6098485	6026445,6040645,6041872,6072798,6073770,6082274,6085248,6087511,6089051,6090475,6094485,6095443,6095624,6096756,6097357,6101192	Gene ID= ENSG00000069424.14 TPM= 60.33 Transcript Type= protein_coding
chr1	6026013	6101192	6026013	6101192	+	ENST00000352527.5@KCNAB2	ENST00000352527.5	protein_coding	6026013,6040517,6072755,6073733,6082195,6085204,6087467,6089008,6090389,6094400,6095323,6095530,6096636,6097269,6098485	6026445,6040645,6072798,6073770,6082274,6085248,6087511,6089051,6090475,6094485,6095443,6095624,6096756,6097357,6101192	Gene ID= ENSG00000069424.14 TPM= 81.35 Transcript Type= protein_coding
chr1	6185020	6199612	6185020	6199612	-	ENST00000234875.8@RPL22	ENST00000234875.8	protein_coding	6199562,6197652,6192930,6185020	6199612,6197756,6193054,6186816	Gene ID= ENSG00000116251.9 TPM= 95.74 Transcript Type= protein_coding
chr1	6206176	6221299	6206176	6221299	+	ENST00000377939.4@RNF207	ENST00000377939.4	protein_coding	6206176,6206536,6207379,6208881,6209115,6209268,6209414,6209924,6210223,6210370,6210870,6211021,6211867,6212231,6212682,6213066,6218289,6219236	6206302,6206726,6207511,6209025,6209196,6209343,6209539,6209970,6210295,6210438,6210938,6211118,6212053,6212416,6212733,6213183,6218369,6221299	Gene ID= ENSG00000158286.12 TPM= 2.34 Transcript Type= protein_coding
chr1	6221193	6235940	6221193	6235940	-	ENST00000343813.9@ICMT	ENST00000343813.9	protein_coding	6235717,6234886,6233474,6231902,6221193	6235940,6234974,6233643,6232119,6225262	Gene ID= ENSG00000116237.15 TPM= 24.52 Transcript Type= protein_coding
chr1	6247346	6261095	6247346	6261095	-	transcript1150.chr1.nnic@GPR153	transcript1150.chr1.nnic	protein_coding	6260825,6254550,6253718,6251338,6250440,6247346	6261095,6255122,6254147,6251530,6250624,6250003	Gene ID= ENSG00000158292.6 TPM= 46.12 Transcript Type= NA
chr1	6247353	6261104	6247353	6261104	-	transcript1153.chr1.nic@GPR153	transcript1153.chr1.nic	protein_coding	6260825,6254550,6253718,6251338,6247353	6261104,6255014,6254147,6251530,6250624	Gene ID= ENSG00000158292.6 TPM= 42.62 Transcript Type= NA
chr1	6252288	6261084	6252288	6261084	-	transcript1154.chr1.nic@GPR153	transcript1154.chr1.nic	protein_coding	6260825,6254550,6252288	6261084,6255014,6254147	Gene ID= ENSG00000158292.6 TPM= 3.5 Transcript Type= NA
chr1	6256377	6261095	6256377	6261095	-	transcript1158.chr1.nnic@NA	transcript1158.chr1.nnic	NA	6256377	6261095	Gene ID= novel_gene_chr1_1159 TPM= 2.34 Transcript Type= NA
chr1	6264273	6385813	6264273	6385813	-	ENST00000377855.6@ACOT7	ENST00000377855.6	protein_coding	6385494,6349749,6339433,6333477,6327299,6318492,6294864,6281102,6264273	6385813,6349866,6339589,6333568,6327413,6318578,6294980,6281286,6264695	Gene ID= ENSG00000097021.19 TPM= 7.01 Transcript Type= protein_coding
chr1	6264273	6394391	6264273	6394391	-	ENST00000361521.8@ACOT7	ENST00000361521.8	protein_coding	6393257,6349749,6339433,6333477,6327299,6318492,6294864,6281102,6264273	6394391,6349866,6339589,6333568,6327413,6318578,6294980,6281286,6264695	Gene ID= ENSG00000097021.19 TPM= 38.53 Transcript Type= protein_coding
chr1	6415232	6419919	6415232	6419919	-	ENST00000377834.8@HES2	ENST00000377834.8	protein_coding	6419776,6419607,6419241,6415232	6419919,6419702,6419340,6419153	Gene ID= ENSG00000069812.11 TPM= 4.67 Transcript Type= protein_coding
chr1	6413000	6419903	6413000	6419903	-	ENST00000377836.8@HES2	ENST00000377836.8	protein_coding	6419776,6419607,6413000	6419903,6419702,6413282	Gene ID= ENSG00000069812.11 TPM= 1.17 Transcript Type= protein_coding
chr1	6461151	6466099	6461151	6466099	-	ENST00000513135.5@TNFRSF25	ENST00000513135.5	protein_coding	6465440,6465088,6462863,6462629,6461994,6461151	6466099,6465222,6464719,6462666,6462174,6461762	Gene ID= ENSG00000215788.9 TPM= 9.92 Transcript Type= retained_intron
chr1	6461151	6466195	6461151	6466195	-	ENST00000356876.7@TNFRSF25	ENST00000356876.7	protein_coding	6466069,6465440,6465088,6464552,6464375,6463072,6462863,6462629,6461994,6461151	6466195,6465560,6465222,6464719,6464453,6463127,6462970,6462666,6462174,6461762	Gene ID= ENSG00000215788.9 TPM= 6.42 Transcript Type= protein_coding
chr1	6467122	6497390	6467122	6497390	-	ENST00000400915.7@PLEKHG5	ENST00000400915.7	protein_coding	6497320,6496493,6477529,6475931,6475462,6475047,6474451,6474013,6473251,6472986,6472527,6471758,6471488,6470990,6470735,6470506,6470236,6469544,6469335,6469042,6467825,6467122	6497390,6496569,6477658,6476036,6475522,6475138,6474587,6474164,6473454,6473174,6472622,6471808,6471637,6471100,6470884,6470643,6470355,6469676,6469450,6469241,6468586,6467572	Gene ID= ENSG00000171680.21 TPM= 8.17 Transcript Type= protein_coding
chr1	6521347	6554535	6521347	6554535	-	ENST00000377705.5@NOL9	ENST00000377705.5	protein_coding	6554107,6550396,6549571,6545045,6544826,6541830,6533280,6532463,6531968,6528994,6526696,6521347	6554535,6550615,6549698,6545180,6544922,6541927,6533441,6532760,6532079,6529171,6526829,6526003	Gene ID= ENSG00000162408.10 TPM= 14.01 Transcript Type= protein_coding
chr1	6548139	6554411	6548139	6554411	-	transcript1183.chr1.nic@NOL9	transcript1183.chr1.nic	protein_coding	6554107,6550396,6548139	6554411,6550615,6549698	Gene ID= ENSG00000162408.10 TPM= 3.5 Transcript Type= NA
chr1	6579988	6589280	6579988	6589280	+	transcript1186.chr1.nic@ZBTB48	transcript1186.chr1.nic	protein_coding	6579988,6580541,6582058,6585919,6586695,6587205,6587478,6588060,6588278,6588756,6588916	6580049,6581299,6582299,6586030,6586787,6587291,6587632,6588196,6588442,6588844,6589280	Gene ID= ENSG00000204859.12 TPM= 6.31 Transcript Type= NA
chr1	6580013	6589280	6580013	6589280	+	transcript1188.chr1.nnic@ZBTB48	transcript1188.chr1.nnic	protein_coding	6580013,6580878,6582058,6585919,6586695,6587205,6587478,6588060,6588278,6588756,6588916	6580070,6581299,6582299,6586030,6586787,6587291,6587632,6588196,6588442,6588844,6589280	Gene ID= ENSG00000204859.12 TPM= 3.97 Transcript Type= NA
chr1	6580027	6589280	6580027	6589280	+	transcript1193.chr1.nic@ZBTB48	transcript1193.chr1.nic	protein_coding	6580027,6582058,6585919,6586695,6587205,6587478,6588060,6588278,6588756,6588916	6581299,6582299,6586030,6586787,6587291,6587632,6588196,6588442,6588844,6589280	Gene ID= ENSG00000204859.12 TPM= 3.97 Transcript Type= NA
chr1	6580048	6589280	6580048	6589280	+	ENST00000377674.8@ZBTB48	ENST00000377674.8	protein_coding	6580048,6580541,6582058,6585919,6586695,6587205,6587478,6588060,6588278,6588756,6588916	6580136,6581299,6582299,6586030,6586787,6587291,6587632,6588196,6588442,6588844,6589280	Gene ID= ENSG00000204859.12 TPM= 6.31 Transcript Type= protein_coding
chr1	6590724	6602869	6590724	6602869	-	ENST00000377658.8@KLHL21	ENST00000377658.8	protein_coding	6601797,6599047,6595485,6590724	6602869,6599452,6595557,6593658	Gene ID= ENSG00000162413.16 TPM= 73.56 Transcript Type= protein_coding
chr1	6613685	6624033	6613685	6624033	+	ENST00000377648.4@PHF13	ENST00000377648.4	protein_coding	6613685,6616757,6619803,6621411	6614105,6616858,6620337,6624033	Gene ID= ENSG00000116273.5 TPM= 35.03 Transcript Type= protein_coding
chr1	6624866	6633565	6624866	6633565	+	ENST00000054650.8@THAP3	ENST00000054650.8	protein_coding	6624866,6625150,6628499,6630288,6632391,6632796	6624954,6625292,6628691,6630353,6632495,6633565	Gene ID= ENSG00000041988.15 TPM= 22.18 Transcript Type= protein_coding
chr1	6634168	6701924	6634168	6701924	-	ENST00000377577.9@DNAJC11	ENST00000377577.9	protein_coding	6701729,6680908,6678394,6667709,6653911,6652829,6651529,6645789,6645041,6644558,6639902,6638295,6637447,6637198,6636117,6634168	6701924,6681037,6678467,6667810,6654039,6652951,6651602,6645978,6645126,6644674,6640057,6638364,6637504,6637340,6636246,6635700	Gene ID= ENSG00000007923.15 TPM= 130.77 Transcript Type= protein_coding
chr1	6670461	6701819	6670461	6701819	-	ENST00000465911.1@DNAJC11	ENST00000465911.1	protein_coding	6701729,6680908,6678394,6670461	6701819,6681037,6678467,6670910	Gene ID= ENSG00000007923.15 TPM= 1.17 Transcript Type= processed_transcript
chr1	6656187	6657716	6656187	6657716	+	transcript1216.chr1.nnic@NA	transcript1216.chr1.nnic	NA	6656187	6657716	Gene ID= novel_gene_chr1_1217 TPM= 2.34 Transcript Type= NA
chr1	6785480	6872038	6785480	6872038	+	ENST00000473578.5@CAMTA1	ENST00000473578.5	protein_coding	6785480,6820181,6825092,6871757	6785575,6820250,6825210,6872038	Gene ID= ENSG00000171735.18 TPM= 42.03 Transcript Type= protein_coding
chr1	6785464	6888201	6785464	6888201	+	ENST00000476163.5@CAMTA1	ENST00000476163.5	protein_coding	6785464,6825092,6871757,6887654	6785575,6825210,6871840,6888201	Gene ID= ENSG00000171735.18 TPM= 19.85 Transcript Type= processed_transcript
chr1	6785454	6872053	6785454	6872053	+	ENST00000490738.5@CAMTA1	ENST00000490738.5	protein_coding	6785454,6825092,6871757	6785575,6825210,6872053	Gene ID= ENSG00000171735.18 TPM= 14.01 Transcript Type= processed_transcript
chr1	7487381	7487562	7487381	7487562	-	transcript1227.chr1.nnic@NA	transcript1227.chr1.nnic	NA	7487381	7487562	Gene ID= novel_gene_chr1_1228 TPM= 2.34 Transcript Type= NA
chr1	7709221	7768131	7709221	7768131	+	transcript1229.chr1.nnic@CAMTA1	transcript1229.chr1.nnic	protein_coding	7709221,7714164,7732448,7736344,7736931,7737255,7738298,7744835,7745845,7747710,7749771,7751199,7752459,7766459	7709338,7714426,7732599,7736540,7737009,7737570,7738482,7745022,7746091,7747781,7749791,7751392,7752533,7768131	Gene ID= ENSG00000171735.18 TPM= 2.34 Transcript Type= NA
chr1	7704695	7768131	7704695	7768131	+	transcript1232.chr1.nnic@CAMTA1	transcript1232.chr1.nnic	protein_coding	7704695,7732448,7736344,7736931,7737255,7737959,7744835,7745845,7747710,7749771,7751199,7752459,7766459	7704894,7732599,7736540,7737009,7737570,7738482,7745022,7746091,7747781,7749791,7751392,7752533,7768131	Gene ID= ENSG00000171735.18 TPM= 2.34 Transcript Type= NA
chr1	7704695	7768131	7704695	7768131	+	transcript1234.chr1.nnic@CAMTA1	transcript1234.chr1.nnic	protein_coding	7704695,7732448,7736344,7736931,7737255,7738298,7744835,7745845,7747710,7749771,7751199,7752459,7766459	7704894,7732599,7736540,7737009,7737570,7738482,7745022,7746091,7747781,7749791,7751392,7752533,7768131	Gene ID= ENSG00000171735.18 TPM= 3.5 Transcript Type= NA
chr1	7771269	7781432	7771269	7781432	+	ENST00000054666.10@VAMP3	ENST00000054666.10	protein_coding	7771269,7773442,7777160,7778118,7779626	7771385,7773511,7777318,7778169,7781432	Gene ID= ENSG00000049245.12 TPM= 187.98 Transcript Type= protein_coding
chr1	7784279	7812649	7784279	7812649	+	transcript1259.chr1.nic@PER3	transcript1259.chr1.nic	protein_coding	7784279,7784654,7785441,7786721,7788045,7793957,7798525,7801113,7803047,7803692,7808893,7809893,7810438	7784376,7785005,7785586,7786836,7788246,7794008,7798673,7801191,7803153,7803848,7808998,7810021,7812649	Gene ID= ENSG00000049246.14 TPM= 3.5 Transcript Type= NA
chr1	7784321	7788570	7784321	7788570	+	transcript1263.chr1.nic@PER3	transcript1263.chr1.nic	protein_coding	7784321,7784654,7785441	7784376,7785005,7788570	Gene ID= ENSG00000049246.14 TPM= 2.34 Transcript Type= NA
chr1	7784429	7845176	7784429	7845176	+	ENST00000613533.4@PER3	ENST00000613533.4	protein_coding	7784429,7784654,7785441,7786721,7788045,7793957,7798525,7801113,7803047,7803692,7808893,7809893,7810438,7819285,7820115,7820467,7826480,7827118,7829834,7835762,7836999,7842672	7784468,7785005,7785586,7786836,7788246,7794008,7798673,7801191,7803153,7803848,7808998,7810021,7810588,7819420,7820239,7820640,7826710,7827815,7830161,7835945,7837149,7845176	Gene ID= ENSG00000049246.14 TPM= 12.26 Transcript Type= protein_coding
chr1	7784654	7845177	7784654	7845177	+	ENST00000377532.7@PER3	ENST00000377532.7	protein_coding	7784654,7785441,7786721,7788045,7793957,7798525,7801113,7803047,7803692,7808893,7809893,7810438,7819285,7820115,7820467,7826480,7827118,7829834,7835762,7836999,7842672	7785005,7785586,7786836,7788246,7794008,7798673,7801191,7803153,7803848,7808998,7810021,7810588,7819420,7820239,7820640,7826710,7827815,7830161,7835945,7837149,7845177	Gene ID= ENSG00000049246.14 TPM= 14.59 Transcript Type= protein_coding
chr1	7915894	7943165	7915894	7943165	-	ENST00000615230.4@TNFRSF9	ENST00000615230.4	protein_coding	7943139,7940784,7939895,7938721,7938193,7937690,7935013,7933162,7915894	7943165,7940933,7940078,7938828,7938330,7937756,7935143,7933296,7920923	Gene ID= ENSG00000049249.8 TPM= 1.17 Transcript Type= protein_coding
chr1	7961663	7985279	7961663	7985279	+	ENST00000338639.9@PARK7	ENST00000338639.9	protein_coding	7961663,7962763,7965324,7969345,7970894,7977652,7984894	7961793,7962875,7965425,7969404,7970963,7977738,7985279	Gene ID= ENSG00000116288.12 TPM= 96.91 Transcript Type= protein_coding
chr1	7961894	7985250	7961894	7985250	+	ENST00000377491.5@PARK7	ENST00000377491.5	protein_coding	7961894,7962763,7965324,7969345,7970894,7977652,7984894	7962081,7962875,7965425,7969404,7970963,7977738,7985250	Gene ID= ENSG00000116288.12 TPM= 1.17 Transcript Type= protein_coding
chr1	8011727	8026314	8011727	8026314	-	transcript1272.chr1.nnic@ERRFI1	transcript1272.chr1.nnic	protein_coding	8026158,8015495,8015308,8013359,8011727	8026314,8015692,8015384,8014396,8012957	Gene ID= ENSG00000116285.12 TPM= 12.84 Transcript Type= NA
chr1	8011719	8026308	8011719	8026308	-	ENST00000377482.9@ERRFI1	ENST00000377482.9	protein_coding	8026158,8015495,8015308,8011719	8026308,8015692,8015384,8014396	Gene ID= ENSG00000116285.12 TPM= 73.56 Transcript Type= protein_coding
chr1	8020554	8023735	8020554	8023735	-	transcript1284.chr1.nnic@NA	transcript1284.chr1.nnic	NA	8020554	8023735	Gene ID= novel_gene_chr1_1285 TPM= 3.5 Transcript Type= NA
chr1	8026483	8026692	8026483	8026692	+	transcript1286.chr1.nnic@NA	transcript1286.chr1.nnic	NA	8026483	8026692	Gene ID= novel_gene_chr1_1287 TPM= 2.34 Transcript Type= NA
chr1	8352406	8360647	8352406	8360647	-	transcript1292.chr1.nic@RERE	transcript1292.chr1.nic	protein_coding	8360112,8359764,8358196,8356100,8355419,8352406	8360647,8359986,8358916,8356246,8355599,8355120	Gene ID= ENSG00000142599.17 TPM= 66.17 Transcript Type= NA
chr1	8354626	8817643	8354626	8817643	-	ENST00000400908.6@RERE	ENST00000400908.6	protein_coding	8817160,8655973,8624310,8614561,8557418,8556475,8541214,8508627,8497405,8495063,8465925,8422727,8365812,8364746,8364056,8362683,8361763,8360112,8359764,8358196,8356100,8355419,8354626	8817643,8656441,8624380,8614686,8557523,8556571,8541318,8508675,8497529,8495162,8466023,8422807,8365974,8364838,8364255,8362844,8361876,8361490,8359986,8358916,8356246,8355599,8355120	Gene ID= ENSG00000142599.17 TPM= 22.97 Transcript Type= protein_coding
chr1	8380342	8384500	8380342	8384500	-	transcript1299.chr1.nnic@NA	transcript1299.chr1.nnic	NA	8380342	8384500	Gene ID= novel_gene_chr1_1300 TPM= 2.34 Transcript Type= NA
chr1	8411883	8414071	8411883	8414071	+	transcript1297.chr1.nnic@NA	transcript1297.chr1.nnic	NA	8411883	8414071	Gene ID= novel_gene_chr1_1298 TPM= 2.34 Transcript Type= NA
chr1	8861002	8878690	8861002	8878690	-	ENST00000234590.8@ENO1	ENST00000234590.8	protein_coding	8878580,8874824,8871891,8870452,8867988,8867117,8866279,8865285,8863891,8863235,8862887,8861002	8878690,8874917,8871986,8870510,8868057,8867250,8866501,8865482,8864092,8863343,8862945,8861429	Gene ID= ENSG00000074800.13 TPM= 1303.42 Transcript Type= protein_coding
chr1	9035107	9069716	9035107	9069716	-	ENST00000377424.8@SLC2A5	ENST00000377424.8	protein_coding	9069504,9058152,9057448,9047610,9041785,9040064,9039800,9039552,9038828,9038431,9037897,9035107	9069716,9058250,9057608,9047734,9041937,9040189,9039987,9039662,9038929,9038506,9038024,9037789	Gene ID= ENSG00000142583.17 TPM= 1.17 Transcript Type= protein_coding
chr1	9125969	9129144	9125969	9129144	-	transcript1331.chr1.nnic@NA	transcript1331.chr1.nnic	NA	9125969	9129144	Gene ID= novel_gene_chr1_1332 TPM= 2.34 Transcript Type= NA
chr1	9148286	9150189	9148286	9150189	-	transcript1344.chr1.nnic@NA	transcript1344.chr1.nnic	NA	9148286	9150189	Gene ID= novel_gene_chr1_1345 TPM= 2.34 Transcript Type= NA
chr1	9153984	9156667	9153984	9156667	+	transcript1340.chr1.nnic@NA	transcript1340.chr1.nnic	NA	9153984	9156667	Gene ID= novel_gene_chr1_1341 TPM= 7.01 Transcript Type= NA
chr1	9177249	9179612	9177249	9179612	+	transcript1342.chr1.nnic@NA	transcript1342.chr1.nnic	NA	9177249	9179612	Gene ID= novel_gene_chr1_1343 TPM= 29.19 Transcript Type= NA
chr1	9182155	9185383	9182155	9185383	+	transcript1337.chr1.nnic@LINC01759	transcript1337.chr1.nnic	lincRNA	9182155,9183954	9183807,9185383	Gene ID= ENSG00000234546.3 TPM= 3.5 Transcript Type= NA
chr1	9234775	9271337	9234775	9271337	+	ENST00000377403.6@H6PD	ENST00000377403.6	protein_coding	9234775,9244925,9246966,9262059,9263509	9235066,9245561,9247083,9262328,9271337	Gene ID= ENSG00000049239.12 TPM= 94.58 Transcript Type= protein_coding
chr1	9239175	9242355	9239175	9242355	+	transcript1354.chr1.nnic@NA	transcript1354.chr1.nnic	NA	9239175	9242355	Gene ID= novel_gene_chr1_1355 TPM= 2.34 Transcript Type= NA
chr1	9292880	9369532	9292880	9369532	+	ENST00000328089.10@SPSB1	ENST00000328089.10	protein_coding	9292880,9355743,9367448	9293071,9356585,9369532	Gene ID= ENSG00000171621.13 TPM= 75.89 Transcript Type= protein_coding
chr1	9425094	9429075	9425094	9429075	-	ENST00000641325.1@AL928921.2	ENST00000641325.1	lincRNA	9428922,9425094	9429075,9427381	Gene ID= ENSG00000284693.1 TPM= 5.84 Transcript Type= lincRNA
chr1	9539482	9585179	9539482	9585179	+	ENST00000302692.6@SLC25A33	ENST00000302692.6	protein_coding	9539482,9553626,9567284,9570258,9573346,9579954,9582299	9539747,9553805,9567361,9570358,9573412,9580234,9585179	Gene ID= ENSG00000171612.6 TPM= 1.17 Transcript Type= protein_coding
chr1	9651717	9728919	9651717	9728919	+	transcript1378.chr1.nnic@PIK3CD	transcript1378.chr1.nnic	protein_coding	9651717,9710424,9715541,9715849,9716440,9716959,9717537,9718694,9719921,9720112,9720611,9720742,9721127,9721444,9721761,9721975,9722244,9722528,9723125,9723969,9724276,9724804,9726909	9651802,9710596,9715769,9716078,9716619,9717108,9717626,9718915,9720017,9720242,9720661,9720909,9721248,9721587,9721860,9722153,9722356,9722606,9723292,9724092,9724421,9724936,9728919	Gene ID= ENSG00000171608.15 TPM= 3.5 Transcript Type= NA
chr1	9716887	9728919	9716887	9728919	+	transcript1386.chr1.nic@PIK3CD	transcript1386.chr1.nic	protein_coding	9716887,9717537,9718694,9719921,9720112,9720611,9720742,9721127,9721444,9721761,9721975,9722244,9722528,9723125,9723969,9724276,9724804,9726909	9717108,9717626,9718915,9720017,9720242,9720661,9720909,9721248,9721587,9721860,9722153,9722356,9722606,9723292,9724092,9724421,9724936,9728919	Gene ID= ENSG00000171608.15 TPM= 2.34 Transcript Type= NA
chr1	9651745	9728919	9651745	9728919	+	ENST00000377346.8@PIK3CD	ENST00000377346.8	protein_coding	9651745,9691467,9710424,9715541,9715849,9716440,9716959,9717537,9718694,9719921,9720112,9720611,9720742,9721127,9721444,9721761,9721975,9722244,9722528,9723125,9723969,9724276,9724804,9726909	9651802,9691571,9710596,9715769,9716078,9716619,9717108,9717626,9718915,9720017,9720242,9720661,9720909,9721248,9721587,9721860,9722153,9722356,9722606,9723292,9724092,9724421,9724936,9728919	Gene ID= ENSG00000171608.15 TPM= 16.35 Transcript Type= protein_coding
chr1	9729026	9824526	9729026	9824526	-	ENST00000377298.8@CLSTN1	ENST00000377298.8	protein_coding	9823643,9773272,9756481,9755114,9751473,9749764,9749461,9744395,9743884,9741094,9737498,9735885,9735467,9734948,9733972,9733401,9731761,9731206,9729026	9824526,9773394,9756510,9755309,9751681,9749913,9749646,9744643,9744005,9741256,9737554,9736042,9735615,9735174,9734142,9733546,9731896,9731390,9730705	Gene ID= ENSG00000171603.16 TPM= 46.35 Transcript Type= protein_coding
chr1	9729026	9823993	9729026	9823993	-	transcript1397.chr1.nic@CLSTN1	transcript1397.chr1.nic	protein_coding	9823643,9773272,9755114,9751473,9749764,9749461,9744395,9743884,9741094,9735885,9735467,9734948,9733972,9733401,9731761,9731206,9729026	9823993,9773394,9755309,9751681,9749913,9749646,9744643,9744005,9741256,9736042,9735615,9735174,9734142,9733546,9731896,9731390,9730705	Gene ID= ENSG00000171603.16 TPM= 32.93 Transcript Type= NA
chr1	9729028	9823984	9729028	9823984	-	ENST00000361311.4@CLSTN1	ENST00000361311.4	protein_coding	9823643,9773272,9755114,9751473,9749764,9749461,9744395,9743884,9741094,9737498,9735885,9735467,9734948,9733972,9733401,9731761,9731206,9729028	9823984,9773394,9755309,9751681,9749913,9749646,9744643,9744005,9741256,9737554,9736042,9735615,9735174,9734142,9733546,9731896,9731390,9730705	Gene ID= ENSG00000171603.16 TPM= 34.09 Transcript Type= protein_coding
chr1	9729028	9751581	9729028	9751581	-	ENST00000435891.5@CLSTN1	ENST00000435891.5	protein_coding	9751473,9749764,9749461,9744395,9743884,9741094,9735885,9735467,9734948,9733972,9733401,9731761,9731206,9729028	9751581,9749913,9749646,9744643,9744005,9741256,9736042,9735615,9735174,9734142,9733546,9731896,9731390,9730705	Gene ID= ENSG00000171603.16 TPM= 17.16 Transcript Type= protein_coding
chr1	9848276	9910263	9848276	9910263	-	ENST00000377263.5@CTNNBIP1	ENST00000377263.5	protein_coding	9910095,9883705,9877905,9871969,9871187,9848276	9910263,9883738,9877989,9872088,9871277,9850776	Gene ID= ENSG00000178585.14 TPM= 17.51 Transcript Type= protein_coding
chr1	9850109	9910336	9850109	9910336	-	ENST00000400904.7@CTNNBIP1	ENST00000400904.7	protein_coding	9910095,9877905,9871969,9871187,9850109	9910336,9877989,9872088,9871277,9850776	Gene ID= ENSG00000178585.14 TPM= 17.51 Transcript Type= protein_coding
chr1	9930253	9943407	9930253	9943407	-	ENST00000377213.1@LZIC	ENST00000377213.1	protein_coding	9943349,9942624,9936519,9935492,9934762,9932803,9931891,9930253	9943407,9942782,9936627,9935627,9934860,9932898,9931972,9930457	Gene ID= ENSG00000162441.11 TPM= 2.34 Transcript Type= protein_coding
chr1	9926392	9927542	9926392	9927542	-	transcript1431.chr1.nnic@NA	transcript1431.chr1.nnic	NA	9926392	9927542	Gene ID= novel_gene_chr1_1432 TPM= 2.34 Transcript Type= NA
chr1	9997216	10016020	9997216	10016020	+	ENST00000294435.7@RBP7	ENST00000294435.7	protein_coding	9997216,10007570,10008173,10015782	9997331,10007748,10008274,10016020	Gene ID= ENSG00000162444.11 TPM= 3.5 Transcript Type= protein_coding
chr1	10399080	10420144	10399080	10420144	+	ENST00000270776.12@PGD	ENST00000270776.12	protein_coding	10399080,10399629,10400393,10403071,10404161,10408071,10411418,10413062,10416987,10417376,10418826,10419417,10419630	10399125,10399704,10400572,10403136,10404279,10408140,10411552,10413251,10417117,10417509,10418925,10419539,10420144	Gene ID= ENSG00000142657.20 TPM= 223.01 Transcript Type= protein_coding
chr1	10430773	10442809	10430773	10442809	+	transcript1483.chr1.nnic@CENPS-CORT	transcript1483.chr1.nnic	protein_coding	10430773,10432332,10440347,10442265	10431524,10434690,10440413,10442809	Gene ID= ENSG00000251503.8 TPM= 3.5 Transcript Type= NA
chr1	10462468	10472488	10462468	10472488	-	ENST00000377036.2@DFFA	ENST00000377036.2	protein_coding	10472323,10469177,10467190,10463431,10462468	10472488,10469338,10467332,10463620,10463209	Gene ID= ENSG00000160049.11 TPM= 2.34 Transcript Type= protein_coding
chr1	10474887	10630758	10474887	10630758	+	ENST00000356607.8@PEX14	ENST00000356607.8	protein_coding	10474887,10495274,10536213,10599238,10618332,10623019,10624340,10627272,10629531	10475002,10495321,10536297,10599366,10618417,10623121,10624437,10627363,10630758	Gene ID= ENSG00000142655.12 TPM= 12.84 Transcript Type= protein_coding
chr1	10520150	10521772	10520150	10521772	-	transcript1514.chr1.nnic@NA	transcript1514.chr1.nnic	NA	10520150	10521772	Gene ID= novel_gene_chr1_1515 TPM= 5.84 Transcript Type= NA
chr1	10636604	10643490	10636604	10643490	-	transcript1518.chr1.nic@CASZ1	transcript1518.chr1.nic	protein_coding	10643160,10642859,10636604	10643490,10643000,10640059	Gene ID= ENSG00000130940.14 TPM= 21.6 Transcript Type= NA
chr1	10637121	10642361	10637121	10642361	-	transcript1519.chr1.nnic@CASZ1	transcript1519.chr1.nnic	protein_coding	10642023,10637121	10642361,10640059	Gene ID= ENSG00000130940.14 TPM= 5.25 Transcript Type= NA
chr1	11012400	11026420	11012400	11026420	+	ENST00000240185.7@TARDBP	ENST00000240185.7	protein_coding	11012400,11013716,11016844,11018733,11020429,11022124	11012743,11013965,11017007,11018873,11020599,11026420	Gene ID= ENSG00000120948.16 TPM= 101.58 Transcript Type= protein_coding
chr1	11054589	11060024	11054589	11060024	-	ENST00000376957.6@SRM	ENST00000376957.6	protein_coding	11059777,11059225,11058800,11056604,11056011,11055781,11054962,11054589	11060024,11059345,11058892,11056757,11056094,11055926,11055084,11054885	Gene ID= ENSG00000116649.9 TPM= 116.76 Transcript Type= protein_coding
chr1	11066618	11099881	11066618	11099881	-	ENST00000376936.8@EXOSC10	ENST00000376936.8	protein_coding	11099721,11098020,11095758,11091493,11091014,11090554,11088123,11087800,11087448,11082688,11081082,11080764,11080499,11079711,11077601,11077365,11076842,11074231,11073934,11072087,11070900,11069559,11068645,11068008,11066618	11099881,11098156,11095881,11091597,11091179,11090668,11088198,11087910,11087591,11082878,11081238,11080912,11080549,11079822,11077651,11077443,11076948,11074326,11074008,11072171,11070973,11069730,11068706,11068084,11066748	Gene ID= ENSG00000171824.13 TPM= 88.45 Transcript Type= protein_coding
chr1	11066618	11099884	11066618	11099884	-	transcript1551.chr1.nic@EXOSC10	transcript1551.chr1.nic	protein_coding	11099721,11098020,11095758,11091493,11091014,11090554,11088123,11087800,11087448,11082688,11081082,11080499,11079711,11077601,11077365,11076842,11074231,11073934,11072087,11070900,11069559,11068645,11068008,11066618	11099884,11098156,11095881,11091597,11091179,11090668,11088198,11087910,11087591,11082878,11081238,11080912,11079822,11077651,11077443,11076948,11074326,11074008,11072171,11070973,11069730,11068706,11068084,11066748	Gene ID= ENSG00000171824.13 TPM= 4.38 Transcript Type= NA
chr1	11066618	11099884	11066618	11099884	-	transcript1554.chr1.nic@EXOSC10	transcript1554.chr1.nic	protein_coding	11099721,11098020,11095758,11091493,11091014,11090554,11088123,11087800,11087448,11082688,11081082,11080764,11080499,11079711,11076842,11074231,11073934,11072087,11070900,11069559,11068645,11068008,11066618	11099884,11098156,11095881,11091597,11091179,11090668,11088198,11087910,11087591,11082878,11081238,11080912,11080549,11079822,11077651,11074326,11074008,11072171,11070973,11069730,11068706,11068084,11066748	Gene ID= ENSG00000171824.13 TPM= 3.79 Transcript Type= NA
chr1	11106535	11262507	11106535	11262507	-	ENST00000361445.8@MTOR	ENST00000361445.8	protein_coding	11262445,11259248,11258485,11256933,11255992,11253839,11247819,11247625,11243114,11241553,11240303,11238402,11237843,11234143,11233398,11232436,11231300,11230925,11228668,11216148,11213399,11212796,11212312,11210814,11209312,11204561,11199541,11199258,11167442,11157152,11150126,11146676,11144968,11144648,11139533,11139304,11134351,11133080,11130529,11129738,11128855,11128454,11128004,11127624,11127010,11126622,11124498,11121979,11121246,11117004,11115396,11114813,11114318,11112852,11109649,11109290,11108181,11106535	11262507,11259423,11258593,11257165,11256192,11253973,11248094,11247733,11243300,11241681,11240547,11238617,11238048,11234265,11233487,11232528,11231434,11231054,11228918,11216234,11213566,11212908,11212474,11210906,11209458,11204703,11199703,11199403,11167517,11157291,11150226,11146791,11145045,11144755,11139658,11139435,11134466,11133197,11130777,11129838,11128951,11128552,11128126,11127806,11127144,11126796,11124633,11122126,11121368,11117086,11115468,11114887,11114453,11112917,11109729,11109370,11108286,11107500	Gene ID= ENSG00000198793.12 TPM= 49.04 Transcript Type= protein_coding
chr1	11189341	11195981	11189341	11195981	+	ENST00000376819.3@ANGPTL7	ENST00000376819.3	protein_coding	11189341,11192270,11193580,11194461,11194854	11189955,11192370,11193774,11194659,11195981	Gene ID= ENSG00000171819.4 TPM= 3.5 Transcript Type= protein_coding
chr1	11273206	11288434	11273206	11288434	+	ENST00000376810.5@UBIAD1	ENST00000376810.5	protein_coding	11273206,11285644	11274060,11288434	Gene ID= ENSG00000120942.13 TPM= 26.85 Transcript Type= protein_coding
chr1	11648367	11654682	11648367	11654682	-	ENST00000354287.4@FBXO2	ENST00000354287.4	protein_coding	11654319,11650466,11649945,11649779,11649087,11648367	11654682,11650834,11650074,11649874,11649225,11648828	Gene ID= ENSG00000116661.10 TPM= 22.18 Transcript Type= protein_coding
chr1	11654857	11663327	11654857	11663327	+	ENST00000376770.5@FBXO44	ENST00000376770.5	protein_coding	11654857,11655328,11655806,11658267,11658533,11658736,11661130	11654952,11655699,11656100,11658393,11658628,11658871,11663327	Gene ID= ENSG00000132879.13 TPM= 4.09 Transcript Type= protein_coding
chr1	11654369	11662291	11654369	11662291	+	transcript1578.chr1.nic@FBXO44	transcript1578.chr1.nic	protein_coding	11654369,11655806,11658267,11658533,11658736,11661130	11654581,11656100,11658393,11658628,11658871,11662291	Gene ID= ENSG00000132879.13 TPM= 3.5 Transcript Type= NA
chr1	11654369	11662291	11654369	11662291	+	transcript1591.chr1.nic@FBXO44	transcript1591.chr1.nic	protein_coding	11654369,11655806,11658267,11658736,11661130	11654581,11656100,11658628,11658871,11662291	Gene ID= ENSG00000132879.13 TPM= 4.09 Transcript Type= NA
chr1	11654844	11662291	11654844	11662291	+	transcript1596.chr1.nic@FBXO44	transcript1596.chr1.nic	protein_coding	11654844,11655806,11658267,11658736,11661130	11654952,11656100,11658628,11658871,11662291	Gene ID= ENSG00000132879.13 TPM= 11.09 Transcript Type= NA
chr1	11654375	11662289	11654375	11662289	+	ENST00000251546.8@FBXO44	ENST00000251546.8	protein_coding	11654375,11655806,11658267,11658736,11661130	11654581,11656100,11658364,11658871,11662289	Gene ID= ENSG00000132879.13 TPM= 4.67 Transcript Type= protein_coding
chr1	11654910	11662291	11654910	11662291	+	ENST00000376762.8@FBXO44	ENST00000376762.8	protein_coding	11654910,11655806,11658267,11658736,11661130	11654952,11656100,11658364,11658871,11662291	Gene ID= ENSG00000132879.13 TPM= 11.68 Transcript Type= protein_coding
chr1	11654901	11663326	11654901	11663326	+	ENST00000251547.9@FBXO44	ENST00000251547.9	protein_coding	11654901,11655806,11658267,11658533,11658736,11661130	11654952,11656100,11658393,11658628,11658871,11663326	Gene ID= ENSG00000132879.13 TPM= 2.92 Transcript Type= protein_coding
chr1	11664247	11674354	11664247	11674354	+	transcript1588.chr1.nnic@FBXO6	transcript1588.chr1.nnic	protein_coding	11664247,11668656,11671266,11671928,11673277,11673615	11664423,11668944,11671392,11672023,11673412,11674354	Gene ID= ENSG00000116663.10 TPM= 5.84 Transcript Type= NA
chr1	11664124	11674354	11664124	11674354	+	ENST00000376753.8@FBXO6	ENST00000376753.8	protein_coding	11664124,11668656,11671266,11671928,11673277,11673615	11664255,11668944,11671392,11672023,11673412,11674354	Gene ID= ENSG00000116663.10 TPM= 33.86 Transcript Type= protein_coding
chr1	11674480	11691650	11674480	11691650	-	ENST00000235310.7@MAD2L2	ENST00000235310.7	protein_coding	11691413,11681738,11681039,11680562,11680353,11677543,11676848,11676046,11675658,11675082,11674480	11691650,11682016,11681438,11680613,11680471,11677614,11676948,11676140,11675731,11675174,11674816	Gene ID= ENSG00000116670.14 TPM= 37.95 Transcript Type= protein_coding
chr1	11674480	11681118	11674480	11681118	-	transcript1603.chr1.nic@MAD2L2	transcript1603.chr1.nic	protein_coding	11681039,11680353,11677543,11676848,11676046,11675658,11675082,11674480	11681118,11680613,11677614,11676948,11676140,11675731,11675174,11674816	Gene ID= ENSG00000116670.14 TPM= 2.34 Transcript Type= NA
chr1	11674480	11681141	11674480	11681141	-	transcript1604.chr1.nic@MAD2L2	transcript1604.chr1.nic	protein_coding	11681039,11680562,11680353,11676848,11675658,11675082,11674480	11681141,11680613,11680471,11677614,11676140,11675174,11674816	Gene ID= ENSG00000116670.14 TPM= 2.34 Transcript Type= NA
chr1	11674481	11681214	11674481	11681214	-	ENST00000376692.8@MAD2L2	ENST00000376692.8	protein_coding	11681039,11680562,11680353,11677543,11676848,11676046,11675658,11675082,11674481	11681214,11680613,11680471,11677614,11676948,11676140,11675731,11675174,11674816	Gene ID= ENSG00000116670.14 TPM= 22.77 Transcript Type= protein_coding
chr1	11691729	11725857	11691729	11725857	+	ENST00000294485.5@DRAXIN	ENST00000294485.5	protein_coding	11691729,11706249,11709275,11711851,11712340,11715119,11719584	11691853,11706709,11709465,11711965,11712429,11715208,11725857	Gene ID= ENSG00000162490.6 TPM= 1.17 Transcript Type= protein_coding
chr1	11736065	11750765	11736065	11750765	+	transcript1616.chr1.nic@AGTRAP	transcript1616.chr1.nic	protein_coding	11736065,11745803,11748415,11750077	11736235,11747545,11748610,11750765	Gene ID= ENSG00000177674.15 TPM= 9.34 Transcript Type= NA
chr1	11743570	11750765	11743570	11750765	+	transcript1617.chr1.nic@AGTRAP	transcript1617.chr1.nic	protein_coding	11743570,11748415,11750077	11747545,11748610,11750765	Gene ID= ENSG00000177674.15 TPM= 5.84 Transcript Type= NA
chr1	11736147	11750771	11736147	11750771	+	ENST00000376629.8@AGTRAP	ENST00000376629.8	protein_coding	11736147,11745803,11747440,11748415,11750077	11736235,11745837,11747545,11748589,11750771	Gene ID= ENSG00000177674.15 TPM= 25.1 Transcript Type= protein_coding
chr1	11736155	11750765	11736155	11750765	+	ENST00000314340.9@AGTRAP	ENST00000314340.9	protein_coding	11736155,11745803,11747440,11748415,11750077	11736235,11745837,11747545,11748610,11750765	Gene ID= ENSG00000177674.15 TPM= 88.15 Transcript Type= protein_coding
chr1	11786603	11806920	11786603	11806920	-	ENST00000376590.8@MTHFR	ENST00000376590.8	protein_coding	11805888,11802881,11801161,11800212,11796206,11795098,11794729,11794358,11793907,11792278,11791207,11786603	11806920,11803129,11801399,11800322,11796399,11795348,11794863,11794538,11794089,11792379,11791326,11790898	Gene ID= ENSG00000177000.11 TPM= 5.25 Transcript Type= protein_coding
chr1	11785732	11805413	11785732	11805413	-	ENST00000376585.6@MTHFR	ENST00000376585.6	protein_coding	11805380,11803405,11802881,11801161,11800212,11796206,11795098,11794729,11794358,11793907,11792278,11791207,11785732	11805413,11804532,11803129,11801399,11800322,11796399,11795348,11794863,11794538,11794089,11792379,11791326,11790898	Gene ID= ENSG00000177000.11 TPM= 34.44 Transcript Type= protein_coding
chr1	11790476	11805885	11790476	11805885	-	transcript1629.chr1.nnic@MTHFR	transcript1629.chr1.nnic	protein_coding	11805347,11802881,11800212,11796206,11795098,11794729,11793907,11792278,11791207,11790476	11805885,11803129,11801399,11796399,11795348,11794863,11794538,11792379,11791326,11790748	Gene ID= ENSG00000177000.11 TPM= 3.5 Transcript Type= NA
chr1	11806211	11843144	11806211	11843144	+	ENST00000346436.10@CLCN6	ENST00000346436.10	protein_coding	11806211,11807131,11815846,11816615,11819488,11822695,11823707,11824486,11826156,11827089,11828106,11828458,11829196,11833515,11833877,11834236,11834484,11835967,11836999,11837343,11838335,11838535,11840143	11806349,11807190,11815911,11816680,11819554,11822801,11823833,11824553,11826214,11827221,11828219,11828624,11829322,11833638,11834030,11834395,11834590,11836153,11837156,11837499,11838442,11838660,11843144	Gene ID= ENSG00000011021.21 TPM= 19.85 Transcript Type= protein_coding
chr1	11820634	11821901	11820634	11821901	+	transcript1647.chr1.nnic@NA	transcript1647.chr1.nnic	NA	11820634	11821901	Gene ID= novel_gene_chr1_1648 TPM= 2.34 Transcript Type= NA
chr1	11919591	11921162	11919591	11921162	-	transcript1655.chr1.nnic@NA	transcript1655.chr1.nnic	NA	11919591	11921162	Gene ID= novel_gene_chr1_1656 TPM= 4.67 Transcript Type= NA
chr1	11919591	11926423	11919591	11926423	-	ENST00000376572.7@KIAA2013	ENST00000376572.7	protein_coding	11925205,11922636,11919591	11926423,11923489,11920332	Gene ID= ENSG00000116685.15 TPM= 153.25 Transcript Type= protein_coding
chr1	11922175	11926428	11922175	11926428	-	ENST00000376576.3@KIAA2013	ENST00000376576.3	protein_coding	11925205,11922175	11926428,11923489	Gene ID= ENSG00000116685.15 TPM= 15.47 Transcript Type= protein_coding
chr1	11920066	11923275	11920066	11923275	-	transcript1657.chr1.nnic@NA	transcript1657.chr1.nnic	NA	11920066	11923275	Gene ID= novel_gene_chr1_1658 TPM= 5.84 Transcript Type= NA
chr1	11934753	11975537	11934753	11975537	+	ENST00000196061.4@PLOD1	ENST00000196061.4	protein_coding	11934753,11947976,11949773,11950357,11952623,11954830,11956917,11957842,11958516,11960646,11963532,11964175,11964644,11965480,11966251,11966987,11970670,11972872,11974653	11934855,11948067,11949906,11950520,11952735,11954893,11957014,11957943,11958647,11960767,11963636,11964300,11964785,11965593,11966316,11967091,11970816,11972997,11975537	Gene ID= ENSG00000083444.16 TPM= 173.97 Transcript Type= protein_coding
chr1	11937955	11940429	11937955	11940429	-	transcript1666.chr1.nnic@NA	transcript1666.chr1.nnic	NA	11937955	11940429	Gene ID= novel_gene_chr1_1667 TPM= 2.34 Transcript Type= NA
chr1	11980183	12013508	11980183	12013508	+	transcript1668.chr1.nic@MFN2	transcript1668.chr1.nic	protein_coding	11980183,11981970,11982523,11989165,11992555,11996156,11997297,11998770,11998988,12001401,12001769,12001982,12003992,12004509,12004825,12005711,12006538,12007053,12009592,12011496	11980484,11982114,11982590,11989343,11992690,11996318,11997421,11998878,11999095,12001554,12001836,12002103,12004118,12004613,12004927,12005931,12006693,12007249,12009726,12013508	Gene ID= ENSG00000116688.16 TPM= 20.2 Transcript Type= NA
chr1	11980181	12013514	11980181	12013514	+	ENST00000444836.5@MFN2	ENST00000444836.5	protein_coding	11980181,11989165,11992555,11996156,11997297,11998770,11998988,12001401,12001769,12001982,12003992,12004509,12004825,12005711,12006538,12007053,12009592,12011496	11980484,11989343,11992690,11996318,11997421,11998878,11999095,12001554,12001836,12002103,12004118,12004613,12004927,12005931,12006693,12007249,12009726,12013514	Gene ID= ENSG00000116688.16 TPM= 26.04 Transcript Type= protein_coding
chr1	11998453	12013508	11998453	12013508	+	transcript1677.chr1.nic@MFN2	transcript1677.chr1.nic	protein_coding	11998453,11998988,12001401,12001769,12001982,12003992,12004509,12004825,12005711,12006538,12007053,12009592,12011496	11998878,11999095,12001554,12001836,12002103,12004118,12004613,12004927,12005931,12006693,12007249,12009726,12013508	Gene ID= ENSG00000116688.16 TPM= 19.62 Transcript Type= NA
chr1	11980312	12013508	11980312	12013508	+	ENST00000235329.9@MFN2	ENST00000235329.9	protein_coding	11980312,11981970,11989165,11992555,11996156,11997297,11998770,11998988,12001401,12001769,12001982,12003992,12004509,12004825,12005711,12006538,12007053,12009592,12011496	11980484,11982114,11989343,11992690,11996318,11997421,11998878,11999095,12001554,12001836,12002103,12004118,12004613,12004927,12005931,12006693,12007249,12009726,12013508	Gene ID= ENSG00000116688.16 TPM= 96.09 Transcript Type= protein_coding
chr1	12019501	12032039	12019501	12032039	+	transcript1683.chr1.nic@MIIP	transcript1683.chr1.nic	protein_coding	12019501,12021645,12022095,12022833,12029033,12029223,12029765,12031266,12031722	12019552,12021840,12022442,12022917,12029141,12029281,12030124,12031403,12032039	Gene ID= ENSG00000116691.10 TPM= 7.59 Transcript Type= NA
chr1	12019449	12032039	12019449	12032039	+	transcript1684.chr1.nic@MIIP	transcript1684.chr1.nic	protein_coding	12019449,12021645,12022095,12022833,12029033,12029223,12030028,12031266,12031722	12019552,12021840,12022442,12022917,12029141,12029894,12030124,12031403,12032039	Gene ID= ENSG00000116691.10 TPM= 30.36 Transcript Type= NA
chr1	12019449	12032039	12019449	12032039	+	transcript1688.chr1.nic@MIIP	transcript1688.chr1.nic	protein_coding	12019449,12021645,12022095,12022833,12029033,12029223,12031266,12031722	12019552,12021840,12022442,12022917,12029141,12030124,12031403,12032039	Gene ID= ENSG00000116691.10 TPM= 7.59 Transcript Type= NA
chr1	12019466	12032045	12019466	12032045	+	ENST00000235332.5@MIIP	ENST00000235332.5	protein_coding	12019466,12021645,12022095,12022833,12029033,12029223,12029765,12030028,12031266,12031722	12019552,12021840,12022442,12022917,12029141,12029281,12029894,12030124,12031403,12032045	Gene ID= ENSG00000116691.10 TPM= 71.22 Transcript Type= protein_coding
chr1	12125899	12144207	12125899	12144207	+	ENST00000413146.6@TNFRSF8	ENST00000413146.6	protein_coding	12125899,12126183,12135588,12138229,12142287	12126052,12126236,12135613,12138436,12144207	Gene ID= ENSG00000120949.14 TPM= 3.5 Transcript Type= protein_coding
chr1	12167003	12209228	12167003	12209228	+	ENST00000376259.6@TNFRSF1B	ENST00000376259.6	protein_coding	12167003,12188796,12190957,12191774,12192431,12192863,12193955,12194584,12201967,12206740	12167169,12188895,12191085,12191923,12192524,12193098,12194032,12194618,12202171,12209228	Gene ID= ENSG00000028137.18 TPM= 177.47 Transcript Type= protein_coding
chr1	12171178	12174403	12171178	12174403	-	transcript1715.chr1.nnic@NA	transcript1715.chr1.nnic	NA	12171178	12174403	Gene ID= novel_gene_chr1_1716 TPM= 7.01 Transcript Type= NA
chr1	12173290	12177808	12173290	12177808	+	transcript1713.chr1.nnic@NA	transcript1713.chr1.nnic	NA	12173290	12177808	Gene ID= novel_gene_chr1_1714 TPM= 2.34 Transcript Type= NA
chr1	12464940	12512047	12464940	12512047	+	ENST00000543766.2@VPS13D	ENST00000543766.2	protein_coding	12464940,12497500,12506853,12508893	12465249,12497631,12507093,12512047	Gene ID= ENSG00000048707.13 TPM= 4.67 Transcript Type= protein_coding
chr1	12496742	12512047	12496742	12512047	+	transcript1724.chr1.nnic@VPS13D	transcript1724.chr1.nnic	protein_coding	12496742,12497500,12506853,12508893	12497208,12497631,12507093,12512047	Gene ID= ENSG00000048707.13 TPM= 5.84 Transcript Type= NA
chr1	12567996	12617878	12567996	12617878	-	transcript1725.chr1.nnic@DHRS3	transcript1725.chr1.nnic	protein_coding	12617154,12580521,12579293,12578718,12572728,12567996	12617878,12580666,12579412,12578956,12572853,12568424	Gene ID= ENSG00000162496.8 TPM= 48.46 Transcript Type= NA
chr1	12567910	12617836	12567910	12617836	-	transcript1726.chr1.nic@DHRS3	transcript1726.chr1.nic	protein_coding	12616560,12580523,12579293,12578718,12572728,12567910	12617836,12580666,12579412,12578956,12572853,12568424	Gene ID= ENSG00000162496.8 TPM= 37.36 Transcript Type= NA
chr1	12567910	12617878	12567910	12617878	-	transcript1728.chr1.nic@DHRS3	transcript1728.chr1.nic	protein_coding	12617154,12579293,12578718,12572728,12567910	12617878,12580666,12578956,12572853,12568424	Gene ID= ENSG00000162496.8 TPM= 13.43 Transcript Type= NA
chr1	12567910	12617731	12567910	12617731	-	ENST00000616661.4@DHRS3	ENST00000616661.4	protein_coding	12617154,12580523,12579293,12578718,12572728,12567910	12617731,12580666,12579412,12578956,12572853,12568424	Gene ID= ENSG00000162496.8 TPM= 129.6 Transcript Type= protein_coding
chr1	13583465	13617957	13583465	13617957	+	ENST00000294489.10@PDPN	ENST00000294489.10	protein_coding	13583465,13607173,13610387,13613687,13614300,13615905	13584100,13607306,13610516,13613725,13614411,13617957	Gene ID= ENSG00000162493.16 TPM= 22.18 Transcript Type= protein_coding
chr1	13583762	13617957	13583762	13617957	+	ENST00000376057.8@PDPN	ENST00000376057.8	protein_coding	13583762,13607173,13610387,13613687,13614300,13615905	13584100,13607306,13610516,13613725,13614405,13617957	Gene ID= ENSG00000162493.16 TPM= 25.69 Transcript Type= protein_coding
chr1	13704855	13825079	13704855	13825079	+	ENST00000235372.11@PRDM2	ENST00000235372.11	protein_coding	13704855,13715541,13731000,13732779,13742005,13749361,13773078,13778418,13816427,13823159	13705645,13715614,13731117,13732882,13742157,13749487,13773188,13782831,13816570,13825079	Gene ID= ENSG00000116731.22 TPM= 8.76 Transcript Type= protein_coding
chr1	13749403	13788079	13749403	13788079	+	ENST00000413440.5@PRDM2	ENST00000413440.5	protein_coding	13749403,13773078,13778418,13786515	13749487,13773188,13782831,13788079	Gene ID= ENSG00000116731.22 TPM= 2.92 Transcript Type= protein_coding
chr1	14924110	15118043	14924110	15118043	+	transcript1747.chr1.nic@KAZN	transcript1747.chr1.nic	protein_coding	14924110,14960684,15034749,15043989,15056091,15060172,15063572,15065630,15094180,15094815,15101543,15103359,15104023,15112427,15114471	14924572,14960875,15034885,15044159,15056280,15060302,15063622,15065753,15094385,15094933,15101774,15103460,15104189,15112541,15118043	Gene ID= ENSG00000189337.16 TPM= 18.1 Transcript Type= NA
chr1	15099119	15118043	15099119	15118043	+	transcript1757.chr1.nic@KAZN	transcript1757.chr1.nic	protein_coding	15099119,15103359,15104023,15112427,15114471	15101774,15103460,15104189,15112541,15118043	Gene ID= ENSG00000189337.16 TPM= 6.42 Transcript Type= NA
chr1	14924110	15044743	14924110	15044743	+	transcript1758.chr1.nic@KAZN	transcript1758.chr1.nic	protein_coding	14924110,14960684,15034749,15043989	14924572,14960875,15034885,15044743	Gene ID= ENSG00000189337.16 TPM= 2.34 Transcript Type= NA
chr1	14924130	15068152	14924130	15068152	+	ENST00000361144.9@KAZN	ENST00000361144.9	protein_coding	14924130,14960684,15034749,15043989,15056091,15060172,15063572,15065630	14924572,14960875,15034885,15044159,15056280,15060302,15063622,15068152	Gene ID= ENSG00000189337.16 TPM= 10.51 Transcript Type= protein_coding
chr1	15152815	15220477	15152815	15220477	+	transcript1760.chr1.nnic@TMEM51	transcript1760.chr1.nnic	protein_coding	15152815,15210490,15214895,15219326	15153238,15210562,15215431,15220477	Gene ID= ENSG00000171729.13 TPM= 4.47 Transcript Type= NA
chr1	15153733	15220408	15153733	15220408	+	ENST00000400796.7@TMEM51	ENST00000400796.7	protein_coding	15153733,15214895,15219326	15153954,15215431,15220408	Gene ID= ENSG00000171729.13 TPM= 3.89 Transcript Type= protein_coding
chr1	15153709	15220476	15153709	15220476	+	transcript1769.chr1.nnic@TMEM51	transcript1769.chr1.nnic	protein_coding	15153709,15219326	15153954,15220476	Gene ID= ENSG00000171729.13 TPM= 2.92 Transcript Type= NA
chr1	15153789	15220480	15153789	15220480	+	ENST00000376008.2@TMEM51	ENST00000376008.2	protein_coding	15153789,15210490,15214895,15219326	15153954,15210562,15215431,15220480	Gene ID= ENSG00000171729.13 TPM= 10.89 Transcript Type= protein_coding
chr1	15409868	15430331	15409868	15430331	+	transcript1779.chr1.nnic@EFHD2	transcript1779.chr1.nnic	protein_coding	15409868,15425871,15428593	15410279,15426018,15430331	Gene ID= ENSG00000142634.12 TPM= 10.51 Transcript Type= NA
chr1	15409895	15430343	15409895	15430343	+	ENST00000375980.8@EFHD2	ENST00000375980.8	protein_coding	15409895,15425871,15427150,15428593	15410279,15426018,15427284,15430343	Gene ID= ENSG00000142634.12 TPM= 147.12 Transcript Type= protein_coding
chr1	15492270	15524898	15492270	15524898	-	transcript1782.chr1.nic@CASP9	transcript1782.chr1.nic	protein_coding	15524852,15518110,15507873,15506899,15505990,15504611,15495273,15493892,15492270	15524898,15518395,15507907,15507075,15506079,15504758,15495452,15494001,15493035	Gene ID= ENSG00000132906.17 TPM= 2.34 Transcript Type= NA
chr1	15492270	15524295	15492270	15524295	-	ENST00000333868.9@CASP9	ENST00000333868.9	protein_coding	15524069,15518110,15507873,15506899,15505990,15504611,15495273,15493892,15492270	15524295,15518395,15507907,15507075,15506079,15504758,15495452,15494001,15493035	Gene ID= ENSG00000132906.17 TPM= 16.35 Transcript Type= protein_coding
chr1	15526813	15571733	15526813	15571733	+	ENST00000375847.7@DNAJC16	ENST00000375847.7	protein_coding	15526813,15529088,15534237,15536475,15544399,15546767,15548270,15559526,15562142,15563929,15564283,15565919,15566082,15567099,15567778	15526958,15529272,15534303,15536814,15544583,15546871,15548428,15559656,15562325,15564111,15564359,15565999,15566180,15567269,15571733	Gene ID= ENSG00000116138.12 TPM= 9.34 Transcript Type= protein_coding
chr1	15526813	15571731	15526813	15571731	+	ENST00000616884.4@DNAJC16	ENST00000616884.4	protein_coding	15526813,15534237,15536475,15544399,15546767,15548270,15559526,15562142,15563929,15564283,15565919,15566082,15567099,15567778	15526958,15534303,15536814,15544583,15546871,15548428,15559656,15562325,15564111,15564359,15565999,15566180,15567269,15571731	Gene ID= ENSG00000116138.12 TPM= 9.34 Transcript Type= protein_coding
chr1	15634541	15637028	15634541	15637028	-	transcript1795.chr1.nnic@NA	transcript1795.chr1.nnic	NA	15634541	15637028	Gene ID= novel_gene_chr1_1796 TPM= 5.84 Transcript Type= NA
chr1	15654939	15656345	15654939	15656345	-	transcript1797.chr1.nnic@NA	transcript1797.chr1.nnic	NA	15654939	15656345	Gene ID= novel_gene_chr1_1798 TPM= 4.67 Transcript Type= NA
chr1	15684332	15734769	15684332	15734769	+	ENST00000375799.7@PLEKHM2	ENST00000375799.7	protein_coding	15684332,15716237,15716707,15717893,15718538,15719734,15721329,15725317,15727014,15728079,15728267,15728669,15729102,15729797,15730532,15731192,15731889,15732350,15732612,15733797	15684618,15716343,15716816,15717992,15718625,15719920,15721388,15725545,15727832,15728148,15728357,15728733,15729190,15729929,15730722,15731257,15732048,15732529,15732728,15734769	Gene ID= ENSG00000116786.11 TPM= 139.62 Transcript Type= protein_coding
chr1	15758419	15786594	15758419	15786594	+	ENST00000375766.7@FBLIM1	ENST00000375766.7	protein_coding	15758419,15764496,15764964,15767376,15768528,15770409,15774618,15777170,15784548	15758848,15764685,15765233,15767563,15768630,15770578,15774796,15777287,15786594	Gene ID= ENSG00000162458.12 TPM= 49.04 Transcript Type= protein_coding
chr1	15766893	15767546	15766893	15767546	-	transcript1844.chr1.nnic@NA	transcript1844.chr1.nnic	NA	15766893	15767546	Gene ID= novel_gene_chr1_1845 TPM= 2.34 Transcript Type= NA
chr1	15834205	15835858	15834205	15835858	-	transcript1849.chr1.nnic@NA	transcript1849.chr1.nnic	NA	15834205	15835858	Gene ID= novel_gene_chr1_1850 TPM= 3.5 Transcript Type= NA
chr1	15847805	15910151	15847805	15910151	+	transcript1852.chr1.nic@SPEN	transcript1852.chr1.nic	protein_coding	15847805,15872816,15876202,15909321	15848150,15874395,15876678,15910151	Gene ID= ENSG00000065526.10 TPM= 3.5 Transcript Type= NA
chr1	15887971	15890791	15887971	15890791	-	transcript1854.chr1.nnic@NA	transcript1854.chr1.nnic	NA	15887971	15890791	Gene ID= novel_gene_chr1_1855 TPM= 4.67 Transcript Type= NA
chr1	15847864	15940460	15847864	15940460	+	ENST00000375759.7@SPEN	ENST00000375759.7	protein_coding	15847864,15872816,15876202,15909321,15911101,15916128,15918926,15919404,15920870,15922249,15928091,15937163,15937812,15938718,15939296	15848150,15873136,15876678,15909481,15911301,15916279,15919051,15919517,15920983,15922349,15936266,15937645,15938006,15938876,15940460	Gene ID= ENSG00000065526.10 TPM= 25.69 Transcript Type= protein_coding
chr1	15941869	15976126	15941869	15976126	-	ENST00000375743.8@ZBTB17	ENST00000375743.8	protein_coding	15975983,15973039,15948291,15946935,15946154,15945715,15944937,15944697,15944300,15943808,15943599,15943399,15943064,15942529,15942331,15941869	15976126,15973125,15948497,15947123,15946294,15945840,15945202,15944839,15944600,15943895,15943715,15943519,15943194,15942738,15942420,15942252	Gene ID= ENSG00000116809.11 TPM= 47.87 Transcript Type= protein_coding
chr1	15941871	15976132	15941871	15976132	-	ENST00000375733.6@ZBTB17	ENST00000375733.6	protein_coding	15975983,15973039,15948291,15946935,15946154,15945715,15944937,15944697,15944300,15943808,15943599,15943399,15943064,15942529,15942331,15941871	15976132,15973125,15948497,15947123,15946294,15945840,15945202,15944839,15944600,15943895,15943715,15943519,15943194,15942738,15942441,15942252	Gene ID= ENSG00000116809.11 TPM= 1.17 Transcript Type= protein_coding
chr1	15941869	15976118	15941869	15976118	-	transcript1860.chr1.nic@ZBTB17	transcript1860.chr1.nic	protein_coding	15975983,15973039,15948291,15946935,15945715,15944937,15944697,15944300,15943808,15943599,15943399,15943064,15942529,15942331,15941869	15976118,15973125,15948497,15947123,15946294,15945202,15944839,15944600,15943895,15943715,15943519,15943194,15942738,15942420,15942252	Gene ID= ENSG00000116809.11 TPM= 11.68 Transcript Type= NA
chr1	16014028	16018790	16014028	16018790	-	ENST00000311890.13@HSPB7	ENST00000311890.13	protein_coding	16017765,16017074,16014028	16018790,16017207,16015759	Gene ID= ENSG00000173641.17 TPM= 11.68 Transcript Type= protein_coding
chr1	16048789	16057308	16048789	16057308	+	ENST00000375667.7@CLCNKB	ENST00000375667.7	protein_coding	16048789,16049618,16049815,16050516,16050875,16051478,16051710,16052198,16053639,16055435,16055678,16056422,16056869	16049245,16049702,16049916,16050600,16051048,16051547,16051820,16052411,16053772,16055523,16055758,16056508,16057308	Gene ID= ENSG00000184908.17 TPM= 1.17 Transcript Type= protein_coding
chr1	16124337	16156087	16124337	16156087	-	ENST00000358432.7@EPHA2	ENST00000358432.7	protein_coding	16155848,16150896,16148378,16138275,16137853,16135655,16135036,16134468,16133860,16133481,16133180,16132378,16132064,16131721,16130226,16129434,16124337	16156087,16150963,16149047,16138430,16138185,16135770,16135189,16134567,16133915,16133606,16133368,16132439,16132273,16131870,16130419,16129589,16125320	Gene ID= ENSG00000142627.12 TPM= 57.21 Transcript Type= protein_coding
chr1	16147877	16148868	16147877	16148868	-	transcript1887.chr1.nnic@NA	transcript1887.chr1.nnic	NA	16147877	16148868	Gene ID= novel_gene_chr1_1888 TPM= 2.34 Transcript Type= NA
chr1	16198104	16206549	16198104	16206549	-	transcript1892.chr1.nic@ARHGEF19	transcript1892.chr1.nic	protein_coding	16206180,16205931,16205538,16205351,16205087,16204759,16202416,16201782,16199150,16198104	16206549,16206083,16205667,16205425,16205176,16204919,16202574,16201861,16199254,16198744	Gene ID= ENSG00000142632.16 TPM= 3.5 Transcript Type= NA
chr1	16198104	16212609	16198104	16212609	-	ENST00000270747.7@ARHGEF19	ENST00000270747.7	protein_coding	16212502,16208643,16207944,16207675,16207522,16206948,16206180,16205931,16205538,16205351,16205087,16204759,16202416,16201782,16199150,16198104	16212609,16209083,16208225,16207777,16207598,16207210,16206340,16206083,16205667,16205425,16205176,16204919,16202574,16201861,16199254,16198744	Gene ID= ENSG00000142632.16 TPM= 10.51 Transcript Type= protein_coding
chr1	16229392	16231349	16229392	16231349	+	transcript1903.chr1.nnic@NA	transcript1903.chr1.nnic	NA	16229392	16231349	Gene ID= novel_gene_chr1_1904 TPM= 39.7 Transcript Type= NA
chr1	16231699	16237200	16231699	16237200	-	transcript1899.chr1.nnic@RSG1	transcript1899.chr1.nnic	protein_coding	16236631,16233612,16232893,16232499,16231699	16237200,16233764,16233017,16232646,16232297	Gene ID= ENSG00000132881.11 TPM= 2.34 Transcript Type= NA
chr1	16231700	16237162	16231700	16237162	-	ENST00000375599.7@RSG1	ENST00000375599.7	protein_coding	16236631,16233612,16232893,16232510,16231700	16237162,16233764,16233017,16232646,16232297	Gene ID= ENSG00000132881.11 TPM= 10.51 Transcript Type= protein_coding
chr1	16246839	16352468	16246839	16352468	-	transcript1912.chr1.nnic@FBXO42	transcript1912.chr1.nnic	protein_coding	16352255,16316437,16315169,16305803,16294783,16256606,16255711,16253635,16253096,16252288,16246839	16352468,16316568,16315435,16305919,16294917,16256759,16255821,16253731,16253152,16252404,16251785	Gene ID= ENSG00000037637.10 TPM= 2.34 Transcript Type= NA
chr1	16246839	16352454	16246839	16352454	-	ENST00000375592.7@FBXO42	ENST00000375592.7	protein_coding	16352255,16315169,16305803,16294783,16256606,16255711,16253635,16253096,16252288,16246839	16352454,16315435,16305919,16294917,16256759,16255821,16253731,16253152,16252404,16251785	Gene ID= ENSG00000037637.10 TPM= 5.84 Transcript Type= protein_coding
chr1	16347762	16350596	16347762	16350596	+	transcript1944.chr1.nnic@NA	transcript1944.chr1.nnic	NA	16347762	16350596	Gene ID= novel_gene_chr1_1945 TPM= 28.02 Transcript Type= NA
chr1	16367083	16398142	16367083	16398142	+	ENST00000401088.8@SZRD1	ENST00000401088.8	protein_coding	16367083,16391375,16393228,16395038	16367308,16391424,16393482,16398142	Gene ID= ENSG00000055070.16 TPM= 43.78 Transcript Type= protein_coding
chr1	16367225	16398145	16367225	16398145	+	ENST00000401089.3@SZRD1	ENST00000401089.3	protein_coding	16367225,16393228,16395038	16367308,16393482,16398145	Gene ID= ENSG00000055070.16 TPM= 58.96 Transcript Type= protein_coding
chr1	16440672	16460078	16440672	16460078	+	ENST00000337132.9@NECAP2	ENST00000337132.9	protein_coding	16440672,16443632,16447870,16448060,16449093,16451838,16455818,16458842	16440853,16443732,16447974,16448141,16449201,16452015,16455893,16460078	Gene ID= ENSG00000157191.19 TPM= 232.93 Transcript Type= protein_coding
chr1	16440736	16460077	16440736	16460077	+	ENST00000443980.6@NECAP2	ENST00000443980.6	protein_coding	16440736,16443632,16447870,16448060,16449093,16451838,16458842	16440853,16443732,16447974,16448141,16449201,16452015,16460077	Gene ID= ENSG00000157191.19 TPM= 12.26 Transcript Type= protein_coding
chr1	16497163	16499162	16497163	16499162	-	transcript1959.chr1.nnic@NA	transcript1959.chr1.nnic	NA	16497163	16499162	Gene ID= novel_gene_chr1_1960 TPM= 4.67 Transcript Type= NA
chr1	16514645	16515754	16514645	16515754	+	ENST00000562878.1@AL137802.2	ENST00000562878.1	lincRNA	16514645	16515754	Gene ID= ENSG00000261135.1 TPM= 1.17 Transcript Type= lincRNA
chr1	16594003	16613552	16594003	16613552	-	transcript2011.chr1.nic@NBPF1	transcript2011.chr1.nic	protein_coding	16613338,16608508,16594931,16594003	16613552,16608779,16595013,16594661	Gene ID= ENSG00000219481.10 TPM= 3.5 Transcript Type= NA
chr1	16599591	16613605	16599591	16613605	-	transcript2013.chr1.nnic@NBPF1	transcript2013.chr1.nnic	protein_coding	16613338,16608508,16599591	16613605,16608779,16603324	Gene ID= ENSG00000219481.10 TPM= 3.5 Transcript Type= NA
chr1	16605406	16613534	16605406	16613534	-	ENST00000449853.2@NBPF1	ENST00000449853.2	protein_coding	16613338,16608508,16605406	16613534,16608779,16607691	Gene ID= ENSG00000219481.10 TPM= 2.34 Transcript Type= processed_transcript
chr1	16618256	16644718	16618256	16644718	-	transcript1976.chr1.nnic@CROCCP2	transcript1976.chr1.nnic	transcribed_unprocessed_pseudogene	16644646,16643028,16635027,16633095,16632607,16632275,16631530,16630890,16628468,16627145,16626353,16625775,16619845,16618256	16644718,16643145,16635168,16633346,16632769,16632371,16631613,16631109,16628650,16627289,16626499,16626005,16620024,16619103	Gene ID= ENSG00000215908.10 TPM= 3.5 Transcript Type= NA
chr1	16618256	16644718	16618256	16644718	-	transcript1979.chr1.nic@CROCCP2	transcript1979.chr1.nic	transcribed_unprocessed_pseudogene	16644646,16643028,16642767,16635027,16633095,16632275,16631530,16630890,16628468,16627145,16626353,16625775,16619845,16618256	16644718,16643145,16642850,16635168,16633346,16632371,16631613,16631109,16628650,16627289,16626499,16626005,16620038,16619103	Gene ID= ENSG00000215908.10 TPM= 2.92 Transcript Type= NA
chr1	16618256	16644718	16618256	16644718	-	transcript1982.chr1.nnic@CROCCP2	transcript1982.chr1.nnic	transcribed_unprocessed_pseudogene	16644646,16643028,16635027,16633095,16632275,16631530,16630890,16628468,16627145,16626353,16625775,16619845,16618256	16644718,16643145,16635168,16633346,16632371,16631613,16631109,16628650,16627289,16626499,16626005,16620038,16619103	Gene ID= ENSG00000215908.10 TPM= 5.64 Transcript Type= NA
chr1	16618256	16644718	16618256	16644718	-	transcript1983.chr1.nnic@CROCCP2	transcript1983.chr1.nnic	transcribed_unprocessed_pseudogene	16644646,16643028,16633095,16632607,16632275,16631530,16630890,16628468,16627145,16626353,16625775,16619845,16618256	16644718,16643145,16633346,16632769,16632371,16631613,16631109,16628650,16627289,16626499,16626005,16620245,16619103	Gene ID= ENSG00000215908.10 TPM= 3.5 Transcript Type= NA
chr1	16618256	16620822	16618256	16620822	-	transcript2017.chr1.nic@CROCCP2	transcript2017.chr1.nic	transcribed_unprocessed_pseudogene	16619845,16618256	16620822,16619103	Gene ID= ENSG00000215908.10 TPM= 3.89 Transcript Type= NA
chr1	16618273	16644686	16618273	16644686	-	ENST00000639456.1@CROCCP2	ENST00000639456.1	transcribed_unprocessed_pseudogene	16644646,16643028,16642767,16635027,16633095,16632275,16631530,16630890,16628468,16627145,16626353,16625775,16618273	16644686,16643145,16642850,16635168,16633346,16632371,16631613,16631109,16628650,16627289,16626499,16626005,16619103	Gene ID= ENSG00000215908.10 TPM= 5.84 Transcript Type= processed_transcript
chr1	16618256	16620644	16618256	16620644	-	transcript2019.chr1.nnic@NA	transcript2019.chr1.nnic	NA	16618256	16620644	Gene ID= novel_gene_chr1_2020 TPM= 7.39 Transcript Type= NA
chr1	16647394	16650419	16647394	16650419	+	transcript2001.chr1.nic@MST1P2	transcript2001.chr1.nic	unprocessed_pseudogene	16647394,16648432,16648756,16648881,16649174,16649379,16649607,16649810,16650074	16648401,16648664,16648792,16649001,16649251,16649525,16649713,16649949,16650419	Gene ID= ENSG00000186301.8 TPM= 8.17 Transcript Type= NA
chr1	16757120	16759571	16757120	16759571	-	transcript2008.chr1.nic@MST1L	transcript2008.chr1.nic	transcribed_unprocessed_pseudogene	16758803,16758675,16757942,16757754,16757518,16757120	16759571,16758711,16758586,16757860,16757657,16757393	Gene ID= ENSG00000186715.10 TPM= 15.18 Transcript Type= NA
chr1	16888542	16889649	16888542	16889649	-	ENST00000457075.1@BX284668.5	ENST00000457075.1	lincRNA	16889548,16888542	16889649,16888785	Gene ID= ENSG00000238142.1 TPM= 4.67 Transcript Type= lincRNA
chr1	16888543	16889672	16888543	16889672	-	transcript2022.chr1.nnic@NA	transcript2022.chr1.nnic	NA	16888543	16889672	Gene ID= novel_gene_chr1_2023 TPM= 3.5 Transcript Type= NA
chr1	16914082	16972979	16914082	16972979	+	transcript2027.chr1.nnic@CROCC	transcript2027.chr1.nnic	protein_coding	16914082,16930286,16930429,16931291,16936637,16937641,16938400,16938909,16939894,16944100,16945462,16946259,16946761,16948331,16948799,16950953,16953302,16954223,16954734,16955312,16955997,16958583,16960758,16965723,16965999,16966408,16968203,16969116,16969785,16970253,16970636,16971465,16972360	16914137,16930347,16930594,16931397,16936873,16937737,16938483,16939142,16940093,16944282,16945606,16946405,16946991,16948524,16948926,16951122,16953481,16954357,16954877,16955550,16956156,16958750,16961130,16965892,16966119,16966571,16968418,16969340,16969934,16970453,16970767,16971647,16972979	Gene ID= ENSG00000058453.16 TPM= 17.32 Transcript Type= NA
chr1	16914082	16970967	16914082	16970967	+	transcript2029.chr1.nnic@CROCC	transcript2029.chr1.nnic	protein_coding	16914082,16930286,16930429,16931291,16936637,16937641,16938400,16938909,16939894,16944100,16945462,16946259,16946761,16948331,16948799,16950953,16953302,16954223,16954734,16955312,16955997,16958583,16960758,16965723,16965999,16966408,16968203,16969116,16969785,16970253,16970636	16914137,16930347,16930594,16931397,16936873,16937737,16938483,16939142,16940093,16944282,16945606,16946405,16946991,16948524,16948926,16951122,16953481,16954357,16954877,16955550,16956156,16958750,16961130,16965892,16966119,16966571,16968418,16969340,16969934,16970453,16970967	Gene ID= ENSG00000058453.16 TPM= 2.72 Transcript Type= NA
chr1	16953038	16972979	16953038	16972979	+	transcript2032.chr1.nic@CROCC	transcript2032.chr1.nic	protein_coding	16953038,16954223,16954734,16955312,16955997,16958583,16960758,16965723,16965999,16966408,16968203,16969116,16969785,16970253,16970636,16971465,16972360	16953481,16954357,16954877,16955550,16956156,16958750,16961130,16965892,16966119,16966571,16968418,16969340,16969934,16970453,16970767,16971647,16972979	Gene ID= ENSG00000058453.16 TPM= 13.81 Transcript Type= NA
chr1	16974502	16980835	16974502	16980835	-	ENST00000375535.3@MFAP2	ENST00000375535.3	protein_coding	16980587,16978237,16977109,16976897,16976708,16976501,16975643,16975269,16974502	16980835,16978314,16977198,16976923,16976794,16976545,16975730,16975342,16975023	Gene ID= ENSG00000117122.13 TPM= 42.62 Transcript Type= protein_coding
chr1	16974502	16980685	16974502	16980685	-	transcript2054.chr1.nic@MFAP2	transcript2054.chr1.nic	protein_coding	16980587,16978237,16977109,16976708,16976501,16975643,16975269,16974502	16980685,16978314,16977198,16976923,16976545,16975730,16975342,16975023	Gene ID= ENSG00000117122.13 TPM= 5.25 Transcript Type= NA
chr1	16974502	16980620	16974502	16980620	-	transcript2055.chr1.nic@MFAP2	transcript2055.chr1.nic	protein_coding	16980587,16978237,16977109,16976897,16976708,16975643,16975269,16974502	16980620,16978314,16977198,16976923,16976794,16976545,16975342,16975023	Gene ID= ENSG00000117122.13 TPM= 2.92 Transcript Type= NA
chr1	16974502	16980685	16974502	16980685	-	transcript2057.chr1.nic@MFAP2	transcript2057.chr1.nic	protein_coding	16980587,16978237,16977109,16975643,16975269,16974502	16980685,16978314,16977198,16976923,16975342,16975023	Gene ID= ENSG00000117122.13 TPM= 2.92 Transcript Type= NA
chr1	16985958	17011938	16985958	17011938	-	transcript2049.chr1.nic@ATP13A2	transcript2049.chr1.nic	protein_coding	17011729,17005684,17005374,17005014,17004707,17004332,17002296,17002034,17000400,17000246,17000011,16997020,16996386,16996254,16995976,16993629,16992486,16992243,16992009,16991734,16990127,16989887,16989691,16988322,16988138,16987046,16986805,16985958	17011938,17005778,17005556,17005072,17004821,17004411,17002373,17002103,17000534,17000312,17000142,16997175,16996496,16996300,16996164,16993835,16992581,16992402,16992129,16991858,16990287,16990003,16989770,16988474,16988234,16987269,16986956,16986358	Gene ID= ENSG00000159363.17 TPM= 3.67 Transcript Type= NA
chr1	16985958	17011928	16985958	17011928	-	ENST00000452699.5@ATP13A2	ENST00000452699.5	protein_coding	17011729,17005684,17005374,17005014,17004707,17004332,17002296,17002034,17000400,17000246,17000011,16997020,16996386,16996254,16995976,16993629,16992486,16992243,16992009,16991734,16990127,16989887,16989691,16988322,16988138,16987046,16986805,16986463,16985958	17011928,17005778,17005556,17005072,17004821,17004411,17002373,17002103,17000534,17000312,17000142,16997175,16996496,16996300,16996164,16993835,16992581,16992402,16992129,16991858,16990287,16990003,16989770,16988474,16988234,16987269,16986956,16986632,16986358	Gene ID= ENSG00000159363.17 TPM= 70.45 Transcript Type= protein_coding
chr1	16985958	17011772	16985958	17011772	-	ENST00000326735.12@ATP13A2	ENST00000326735.12	protein_coding	17011729,17005684,17005374,17005014,17004692,17004332,17002296,17002034,17000400,17000246,17000011,16997020,16996386,16996254,16995976,16993629,16992486,16992243,16992009,16991734,16990127,16989887,16989691,16988322,16988138,16987046,16986805,16986463,16985958	17011772,17005778,17005556,17005072,17004821,17004411,17002373,17002103,17000534,17000312,17000142,16997175,16996496,16996300,16996164,16993835,16992581,16992402,16992129,16991858,16990287,16990003,16989770,16988474,16988234,16987269,16986956,16986632,16986358	Gene ID= ENSG00000159363.17 TPM= 14.41 Transcript Type= protein_coding
chr1	17018722	17054032	17018722	17054032	-	transcript2062.chr1.nic@SDHB	transcript2062.chr1.nic	protein_coding	17053948,17044761,17033060,17028600,17027749,17023973,17018722	17054032,17044888,17033145,17028736,17027865,17024074,17022730	Gene ID= ENSG00000117118.9 TPM= 2.34 Transcript Type= NA
chr1	17018722	17054170	17018722	17054170	-	ENST00000375499.7@SDHB	ENST00000375499.7	protein_coding	17053948,17044761,17033060,17028600,17027749,17023973,17022608,17018722	17054170,17044888,17033145,17028736,17027865,17024074,17022730,17018958	Gene ID= ENSG00000117118.9 TPM= 92.24 Transcript Type= protein_coding
chr1	17066761	17119435	17066761	17119435	-	ENST00000375486.8@PADI2	ENST00000375486.8	protein_coding	17119280,17104878,17102987,17095909,17093567,17092408,17086521,17084599,17083726,17082545,17079264,17075679,17074856,17071406,17070088,17066761	17119435,17105061,17103059,17095970,17093684,17092533,17086699,17084702,17083837,17082652,17079415,17075823,17074949,17071491,17070216,17069277	Gene ID= ENSG00000117115.12 TPM= 22.18 Transcript Type= protein_coding
chr1	17084638	17087573	17084638	17087573	+	transcript2073.chr1.nnic@NA	transcript2073.chr1.nnic	NA	17084638	17087573	Gene ID= novel_gene_chr1_2074 TPM= 2.34 Transcript Type= NA
chr1	17308197	17364004	17308197	17364004	+	ENST00000375448.4@PADI4	ENST00000375448.4	protein_coding	17308197,17330969,17333943,17336159,17338038,17339688,17341943,17342299,17346028,17347941,17354533,17355983,17356357,17358838,17359280,17363522	17308314,17331149,17334009,17336226,17338155,17339813,17342121,17342402,17346139,17348048,17354687,17356127,17356459,17358908,17359408,17364004	Gene ID= ENSG00000159339.13 TPM= 7.01 Transcript Type= protein_coding
chr1	17406760	17439724	17406760	17439724	-	ENST00000375436.8@RCC2	ENST00000375436.8	protein_coding	17439545,17438230,17429106,17425541,17422705,17422203,17420714,17416480,17413537,17413073,17412122,17409974,17406760	17439724,17438522,17429199,17425684,17422836,17422291,17420828,17416646,17413717,17413178,17412194,17410051,17409194	Gene ID= ENSG00000179051.13 TPM= 52.54 Transcript Type= protein_coding
chr1	17539678	17697869	17539678	17697869	+	transcript2088.chr1.nic@ARHGEF10L	transcript2088.chr1.nic	protein_coding	17539678,17580553,17587460,17588446,17602127,17603508,17607802,17616094,17619339,17621864,17622996,17624387,17625956,17627330,17632321,17634548,17634835,17637888,17638562,17640202,17648554,17654636,17655879,17656554,17664447,17687573,17695158,17696848	17539950,17580632,17587645,17588479,17602218,17603591,17607977,17616202,17619445,17621941,17623175,17624503,17626048,17627503,17632466,17634562,17635016,17638003,17638689,17640302,17648675,17654722,17656102,17656708,17664595,17687747,17695280,17697869	Gene ID= ENSG00000074964.16 TPM= 27.67 Transcript Type= NA
chr1	17588378	17697869	17588378	17697869	+	transcript2094.chr1.nic@ARHGEF10L	transcript2094.chr1.nic	protein_coding	17588378,17602127,17603508,17607802,17616094,17619339,17621864,17622996,17624387,17625956,17627330,17632321,17634548,17634835,17637888,17638562,17640202,17648554,17654636,17655879,17656554,17664447,17687573,17695158,17696848	17588479,17602218,17603591,17607977,17616202,17619445,17621941,17623175,17624503,17626048,17627503,17632466,17634562,17635016,17638003,17638689,17640302,17648675,17654722,17656102,17656708,17664595,17687747,17695280,17697869	Gene ID= ENSG00000074964.16 TPM= 8.99 Transcript Type= NA
chr1	17618313	17697869	17618313	17697869	+	transcript2096.chr1.nnic@ARHGEF10L	transcript2096.chr1.nnic	protein_coding	17618313,17619339,17621864,17622996,17624387,17625956,17627330,17632321,17634548,17634835,17637888,17638562,17639238,17640202,17648554,17654636,17655879,17656554,17664447,17687573,17695158,17696848	17618522,17619445,17621941,17623175,17624503,17626048,17627503,17632466,17634562,17635016,17638003,17638689,17639981,17640302,17648675,17654722,17656102,17656708,17664595,17687747,17695280,17697869	Gene ID= ENSG00000074964.16 TPM= 7.62 Transcript Type= NA
chr1	17618313	17697869	17618313	17697869	+	transcript2098.chr1.nic@ARHGEF10L	transcript2098.chr1.nic	protein_coding	17618313,17619339,17621864,17622996,17624387,17625956,17627330,17632321,17634548,17634835,17637888,17638562,17640202,17648554,17654636,17655879,17656554,17664447,17687573,17695158,17696848	17618522,17619445,17621941,17623175,17624503,17626048,17627503,17632466,17634562,17635016,17638003,17638689,17640302,17648675,17654722,17656102,17656708,17664595,17687747,17695280,17697869	Gene ID= ENSG00000074964.16 TPM= 8.41 Transcript Type= NA
chr1	17618313	17697869	17618313	17697869	+	transcript2101.chr1.nnic@ARHGEF10L	transcript2101.chr1.nnic	protein_coding	17618313,17619339,17621864,17622996,17624387,17625956,17627330,17632321,17634835,17637888,17638562,17639238,17640202,17654636,17655879,17656554,17664447,17687573,17695158,17696848	17618522,17619445,17621941,17623175,17624503,17626048,17627503,17632466,17635016,17638003,17638689,17639981,17640302,17654722,17656102,17656708,17664595,17687747,17695280,17697869	Gene ID= ENSG00000074964.16 TPM= 7.04 Transcript Type= NA
chr1	17618316	17697868	17618316	17697868	+	ENST00000375408.7@ARHGEF10L	ENST00000375408.7	protein_coding	17618316,17619339,17621864,17622996,17624387,17625956,17627330,17632321,17634835,17637888,17638562,17640202,17648554,17654636,17655879,17656554,17664447,17687573,17695158,17696848	17618522,17619445,17621941,17623175,17624503,17626048,17627503,17632466,17635016,17638003,17638689,17640302,17648675,17654722,17656102,17656708,17664595,17687747,17695280,17697868	Gene ID= ENSG00000074964.16 TPM= 34.83 Transcript Type= protein_coding
chr1	18107746	18378482	18107746	18378482	+	ENST00000251296.3@IGSF21	ENST00000251296.3	protein_coding	18107746,18227898,18291866,18334892,18362115,18365223,18376310,18376800,18377393,18378256	18108198,18228010,18291987,18335010,18362230,18365697,18376395,18376992,18377431,18378482	Gene ID= ENSG00000117154.11 TPM= 10.51 Transcript Type= protein_coding
chr1	18481691	18485997	18481691	18485997	+	transcript2109.chr1.nnic@NA	transcript2109.chr1.nnic	NA	18481691	18485997	Gene ID= novel_gene_chr1_2110 TPM= 7.01 Transcript Type= NA
chr1	18871432	18902781	18871432	18902781	-	ENST00000375341.7@ALDH4A1	ENST00000375341.7	protein_coding	18902462,18890012,18889362,18886464,18885473,18883279,18883124,18881700,18879300,18877416,18877208,18876315,18875382,18874463,18871432	18902781,18890105,18889454,18886511,18885628,18883428,18883198,18881887,18879373,18877612,18877255,18876467,18875503,18874581,18872957	Gene ID= ENSG00000159423.16 TPM= 39.7 Transcript Type= protein_coding
chr1	18904281	18956686	18904281	18956686	-	ENST00000455833.6@IFFO2	ENST00000455833.6	protein_coding	18955668,18921061,18919678,18918362,18916903,18911963,18911384,18910342,18904281	18956686,18921121,18919773,18918502,18917042,18912083,18911476,18910472,18908666	Gene ID= ENSG00000169991.10 TPM= 3.5 Transcript Type= protein_coding
chr1	19074506	19210276	19074506	19210276	-	ENST00000375254.7@UBR4	ENST00000375254.7	protein_coding	19210073,19201718,19199651,19198799,19198541,19197947,19197670,19197141,19193433,19192481,19192188,19187441,19187164,19186540,19185099,19184016,19183811,19179051,19177461,19176592,19174954,19174319,19173439,19173181,19172864,19170762,19169435,19168027,19167022,19165656,19165249,19164799,19164253,19163764,19162420,19161827,19161589,19160917,19160111,19157815,19156767,19156271,19155441,19154918,19153768,19153301,19152313,19151643,19150577,19148563,19147993,19146826,19145793,19144786,19143980,19141647,19141347,19140788,19139083,19138007,19128978,19128211,19127623,19126446,19124541,19122833,19121934,19121189,19120180,19119557,19118872,19117823,19117221,19115398,19114811,19113945,19113699,19112524,19110742,19110380,19110096,19106837,19106569,19105733,19105048,19104585,19104084,19101520,19100376,19099597,19097193,19096523,19095545,19094906,19093949,19093313,19092819,19088759,19087816,19086679,19086145,19084504,19081349,19077976,19076740,19074506	19210276,19201815,19199754,19198928,19198680,19198049,19197811,19197265,19193557,19192540,19192378,19187540,19187301,19186657,19185286,19184175,19183896,19179220,19177743,19176727,19175033,19174447,19173621,19173306,19173093,19170883,19169532,19168184,19167231,19165757,19165349,19164997,19164441,19163827,19162611,19161897,19161736,19161147,19160281,19157997,19156925,19156423,19155668,19155075,19153939,19153502,19152476,19151859,19150793,19148626,19148127,19147000,19145933,19144907,19144091,19141777,19141524,19140892,19139220,19138181,19129074,19128318,19127739,19126655,19124690,19123060,19122012,19121434,19120348,19119701,19118957,19117910,19117414,19115637,19114949,19114070,19113827,19112867,19110832,19110464,19110223,19106966,19106726,19105842,19105189,19104666,19104257,19101641,19100573,19099677,19097280,19096650,19095652,19095025,19094139,19093486,19092918,19088977,19087929,19086821,19086270,19084698,19081573,19078066,19076902,19074896	Gene ID= ENSG00000127481.14 TPM= 70.06 Transcript Type= protein_coding
chr1	19187267	19190311	19187267	19190311	+	transcript2127.chr1.nnic@NA	transcript2127.chr1.nnic	NA	19187267	19190311	Gene ID= novel_gene_chr1_2128 TPM= 2.34 Transcript Type= NA
chr1	19210395	19213716	19210395	19213716	+	transcript2146.chr1.nnic@NA	transcript2146.chr1.nnic	NA	19210395	19213716	Gene ID= novel_gene_chr1_2147 TPM= 2.34 Transcript Type= NA
chr1	19215664	19251552	19215664	19251552	-	ENST00000477853.5@EMC1	ENST00000477853.5	protein_coding	19251415,19244906,19243950,19243614,19242345,19241016,19240297,19239818,19239231,19238795,19238017,19237142,19235130,19232936,19232624,19231261,19230844,19227313,19223396,19222624,19220764,19219569,19215664	19251552,19245030,19244015,19243707,19242473,19241142,19240446,19239985,19239302,19238857,19238139,19237238,19235252,19233135,19232773,19231422,19230963,19227450,19223569,19222834,19220848,19219698,19219482	Gene ID= ENSG00000127463.14 TPM= 10.51 Transcript Type= protein_coding
chr1	19218945	19251523	19218945	19251523	-	transcript2136.chr1.nnic@EMC1	transcript2136.chr1.nnic	protein_coding	19251415,19243950,19243614,19242345,19241016,19240297,19239818,19239231,19238795,19238017,19237142,19235130,19232936,19232624,19231261,19230844,19227313,19223396,19222624,19220764,19219569,19218945	19251523,19244015,19243707,19242473,19241142,19240446,19239985,19239302,19238857,19238139,19237238,19235252,19233135,19232773,19231422,19230963,19227450,19223569,19222834,19220848,19219698,19219482	Gene ID= ENSG00000127463.14 TPM= 6.42 Transcript Type= NA
chr1	19251539	19260128	19251539	19260128	+	ENST00000330263.4@MRTO4	ENST00000330263.4	protein_coding	19251539,19254782,19255948,19257064,19257454,19257833,19258477,19258681	19251863,19254840,19256051,19257145,19257521,19257984,19258553,19260128	Gene ID= ENSG00000053372.4 TPM= 4.67 Transcript Type= protein_coding
chr1	19303965	19312146	19303965	19312146	-	ENST00000235835.7@AKR7A2	ENST00000235835.7	protein_coding	19311827,19308455,19308158,19307314,19307002,19306018,19303965	19312146,19308642,19308262,19307410,19307101,19306147,19304386	Gene ID= ENSG00000053371.12 TPM= 81.73 Transcript Type= protein_coding
chr1	19303999	19312094	19303999	19312094	-	ENST00000330072.9@AKR7A2	ENST00000330072.9	protein_coding	19311827,19308455,19307314,19307002,19306018,19303999	19312094,19308642,19307410,19307101,19306147,19304386	Gene ID= ENSG00000053371.12 TPM= 1.17 Transcript Type= protein_coding
chr1	19312312	19329280	19312312	19329280	+	transcript2158.chr1.nic@PQLC2	transcript2158.chr1.nic	protein_coding	19312312,19312729,19317600,19324633,19325526,19326245,19326531,19327227,19328572	19312358,19312889,19317841,19324762,19325582,19326387,19326623,19327412,19329280	Gene ID= ENSG00000040487.12 TPM= 3.79 Transcript Type= NA
chr1	19312258	19329300	19312258	19329300	+	transcript2159.chr1.nic@PQLC2	transcript2159.chr1.nic	protein_coding	19312258,19312729,19317600,19324633,19325495,19326245,19326531,19327571	19312358,19312889,19317841,19324762,19325582,19326387,19326623,19329300	Gene ID= ENSG00000040487.12 TPM= 4.67 Transcript Type= NA
chr1	19312303	19329280	19312303	19329280	+	transcript2161.chr1.nnic@PQLC2	transcript2161.chr1.nnic	protein_coding	19312303,19317600,19324633,19325495,19326245,19326531,19327227,19328572	19312358,19317841,19324762,19325582,19326387,19326623,19327412,19329280	Gene ID= ENSG00000040487.12 TPM= 3.79 Transcript Type= NA
chr1	19312326	19329300	19312326	19329300	+	ENST00000375155.7@PQLC2	ENST00000375155.7	protein_coding	19312326,19312729,19317600,19324633,19325495,19326245,19326531,19327227,19328572	19312358,19312889,19317841,19324762,19325582,19326387,19326623,19327412,19329300	Gene ID= ENSG00000040487.12 TPM= 17.81 Transcript Type= protein_coding
chr1	19312328	19329280	19312328	19329280	+	ENST00000375153.7@PQLC2	ENST00000375153.7	protein_coding	19312328,19317600,19324633,19325495,19326245,19326531,19327227,19328572	19312889,19317841,19324762,19325582,19326387,19326623,19327412,19329280	Gene ID= ENSG00000040487.12 TPM= 4.96 Transcript Type= protein_coding
chr1	19338779	19419751	19338779	19419751	-	ENST00000375144.5@CAPZB	ENST00000375144.5	protein_coding	19419661,19385505,19378540,19357422,19356635,19345187,19344358,19338779	19419751,19385626,19378653,19357563,19356751,19345252,19344434,19339617	Gene ID= ENSG00000077549.17 TPM= 31.53 Transcript Type= protein_coding
chr1	19338823	19485485	19338823	19485485	-	ENST00000375142.5@CAPZB	ENST00000375142.5	protein_coding	19485436,19419661,19385505,19378540,19357422,19356635,19345187,19344358,19342752,19338823	19485485,19419750,19385626,19378653,19357563,19356751,19345252,19344434,19342864,19339617	Gene ID= ENSG00000077549.17 TPM= 2.34 Transcript Type= protein_coding
chr1	19339355	19340760	19339355	19340760	-	transcript2176.chr1.nnic@NA	transcript2176.chr1.nnic	NA	19339355	19340760	Gene ID= novel_gene_chr1_2177 TPM= 2.34 Transcript Type= NA
chr1	19597039	19626629	19597039	19626629	+	ENST00000481464.5@MINOS1	ENST00000481464.5	protein_coding	19597039,19600787,19622100,19623474,19626387	19597109,19600971,19622147,19623583,19626629	Gene ID= ENSG00000173436.13 TPM= 1.17 Transcript Type= processed_transcript
chr1	19596977	19629821	19596977	19629821	+	ENST00000617872.4@MINOS1	ENST00000617872.4	protein_coding	19596977,19623474,19626387	19597109,19623583,19629821	Gene ID= ENSG00000173436.13 TPM= 1.75 Transcript Type= protein_coding
chr1	19597001	19626623	19597001	19626623	+	ENST00000467029.5@MINOS1	ENST00000467029.5	protein_coding	19597001,19617258,19622100,19623474,19626387	19597109,19617336,19622147,19623583,19626623	Gene ID= ENSG00000173436.13 TPM= 1.17 Transcript Type= processed_transcript
chr1	19596990	19629820	19596990	19629820	+	ENST00000322753.6@MINOS1	ENST00000322753.6	protein_coding	19596990,19622100,19623474,19626387	19597109,19622147,19623583,19629820	Gene ID= ENSG00000173436.13 TPM= 1.75 Transcript Type= protein_coding
chr1	19596981	19626637	19596981	19626637	+	transcript2188.chr1.nic@MINOS1-NBL1	transcript2188.chr1.nic	protein_coding	19596981,19622100,19623474	19597109,19622147,19626637	Gene ID= ENSG00000270136.5 TPM= 4.67 Transcript Type= NA
chr1	19645766	19658456	19645766	19658456	+	ENST00000615215.4@NBL1	ENST00000615215.4	protein_coding	19645766,19655012,19655324,19656866	19646033,19655200,19655435,19658456	Gene ID= ENSG00000158747.13 TPM= 96.33 Transcript Type= protein_coding
chr1	19644309	19658452	19644309	19658452	+	transcript2203.chr1.nnic@NBL1	transcript2203.chr1.nnic	protein_coding	19644309,19656866	19644446,19658452	Gene ID= ENSG00000158747.13 TPM= 72.97 Transcript Type= NA
chr1	19682242	19799718	19682242	19799718	-	transcript2204.chr1.nnic@TMCO4	transcript2204.chr1.nnic	protein_coding	19799174,19798137,19789928,19787026,19780580,19771308,19770542,19755634,19747163,19746456,19745532,19740777,19739824,19737372,19700768,19694434,19682242	19799718,19798215,19790048,19787117,19780766,19771482,19770569,19755766,19747260,19746599,19745651,19740941,19739960,19737456,19700885,19694551,19683444	Gene ID= ENSG00000162542.13 TPM= 4.38 Transcript Type= NA
chr1	19682242	19799915	19682242	19799915	-	transcript2206.chr1.nnic@TMCO4	transcript2206.chr1.nnic	protein_coding	19799855,19799174,19798137,19787026,19780580,19771308,19770542,19755634,19747163,19746456,19745532,19740777,19739824,19737372,19700768,19694434,19682242	19799915,19799349,19798215,19787117,19780766,19771482,19770569,19755766,19747260,19746599,19745651,19740941,19739960,19737456,19700885,19694551,19683444	Gene ID= ENSG00000162542.13 TPM= 2.63 Transcript Type= NA
chr1	19682242	19799926	19682242	19799926	-	transcript2213.chr1.nnic@TMCO4	transcript2213.chr1.nnic	protein_coding	19799855,19789928,19787026,19780580,19771308,19770542,19755634,19747163,19746456,19745532,19740777,19739824,19737372,19700768,19694434,19682242	19799926,19790048,19787117,19780766,19771482,19770569,19755766,19747260,19746599,19745651,19740941,19739960,19737456,19700885,19694551,19683444	Gene ID= ENSG00000162542.13 TPM= 3.21 Transcript Type= NA
chr1	19682242	19799914	19682242	19799914	-	transcript2217.chr1.nnic@TMCO4	transcript2217.chr1.nnic	protein_coding	19799855,19799174,19787026,19780580,19771308,19770542,19755634,19747163,19746456,19745532,19740777,19739824,19737372,19700768,19694434,19682242	19799914,19799349,19787117,19780766,19771482,19770569,19755766,19747260,19746599,19745651,19740941,19739960,19737456,19700885,19694551,19683444	Gene ID= ENSG00000162542.13 TPM= 3.79 Transcript Type= NA
chr1	19682242	19799727	19682242	19799727	-	transcript2220.chr1.nnic@TMCO4	transcript2220.chr1.nnic	protein_coding	19799484,19787026,19780580,19771308,19770542,19755634,19747163,19746456,19745532,19740777,19739824,19737372,19700768,19694434,19682242	19799727,19787117,19780766,19771482,19770569,19755766,19747260,19746599,19745651,19740941,19739960,19737456,19700885,19694551,19683444	Gene ID= ENSG00000162542.13 TPM= 2.63 Transcript Type= NA
chr1	19682242	19799944	19682242	19799944	-	transcript2221.chr1.nic@TMCO4	transcript2221.chr1.nic	protein_coding	19799855,19787026,19780580,19771308,19770542,19755634,19747163,19746456,19745532,19740777,19739824,19737372,19700768,19694434,19682242	19799944,19787117,19780766,19771482,19770569,19755766,19747260,19746599,19745651,19740941,19739960,19737456,19700885,19694551,19683444	Gene ID= ENSG00000162542.13 TPM= 17.81 Transcript Type= NA
chr1	19682242	19799944	19682242	19799944	-	transcript2227.chr1.nic@TMCO4	transcript2227.chr1.nic	protein_coding	19799855,19787026,19780580,19771308,19770542,19755634,19747163,19746456,19740777,19739824,19737372,19700768,19694434,19682242	19799944,19787117,19780766,19771482,19770569,19755766,19747260,19746599,19740941,19739960,19737456,19700885,19694551,19683444	Gene ID= ENSG00000162542.13 TPM= 4.96 Transcript Type= NA
chr1	19682213	19799917	19682213	19799917	-	ENST00000294543.10@TMCO4	ENST00000294543.10	protein_coding	19799855,19798137,19787026,19780580,19771308,19770542,19755634,19747163,19746456,19745532,19740777,19739824,19737372,19700768,19694434,19682213	19799917,19798215,19787117,19780766,19771482,19770569,19755766,19747260,19746599,19745651,19740941,19739960,19737456,19700885,19694551,19683444	Gene ID= ENSG00000162542.13 TPM= 7.3 Transcript Type= protein_coding
chr1	19975432	19979743	19975432	19979743	-	ENST00000400520.7@PLA2G2A	ENST00000400520.7	protein_coding	19979580,19978734,19978380,19978015,19975432	19979743,19978879,19978524,19978121,19975843	Gene ID= ENSG00000188257.10 TPM= 4.67 Transcript Type= protein_coding
chr1	19975438	19979614	19975438	19979614	-	ENST00000496748.1@PLA2G2A	ENST00000496748.1	protein_coding	19979580,19978015,19975438	19979614,19978879,19975843	Gene ID= ENSG00000188257.10 TPM= 2.34 Transcript Type= processed_transcript
chr1	20070208	20091168	20070208	20091168	+	ENST00000375108.3@PLA2G5	ENST00000375108.3	protein_coding	20070208,20084821,20086083,20089789,20090568	20070465,20084870,20086227,20089895,20091168	Gene ID= ENSG00000127472.10 TPM= 8.17 Transcript Type= protein_coding
chr1	20186085	20196048	20186085	20196048	+	ENST00000375099.3@UBXN10	ENST00000375099.3	protein_coding	20186085,20190547	20186153,20196048	Gene ID= ENSG00000162543.5 TPM= 1.17 Transcript Type= protein_coding
chr1	20482391	20486217	20482391	20486217	-	transcript2245.chr1.nnic@CAMK2N1	transcript2245.chr1.nnic	protein_coding	20485214,20484367,20482391	20486217,20484455,20483719	Gene ID= ENSG00000162545.5 TPM= 4.67 Transcript Type= NA
chr1	20482391	20486220	20482391	20486220	-	ENST00000375078.3@CAMK2N1	ENST00000375078.3	protein_coding	20485214,20482391	20486220,20483719	Gene ID= ENSG00000162545.5 TPM= 101.58 Transcript Type= protein_coding
chr1	20499448	20508161	20499448	20508161	-	ENST00000264198.4@MUL1	ENST00000264198.4	protein_coding	20507905,20503222,20502069,20499448	20508161,20503309,20502189,20501419	Gene ID= ENSG00000090432.6 TPM= 135.44 Transcript Type= protein_coding
chr1	20588948	20618908	20588948	20618908	+	ENST00000375071.3@CDA	ENST00000375071.3	protein_coding	20588948,20604928,20613842,20618452	20589283,20605039,20613899,20618908	Gene ID= ENSG00000158825.5 TPM= 5.84 Transcript Type= protein_coding
chr1	20633455	20651511	20633455	20651511	+	ENST00000321556.4@PINK1	ENST00000321556.4	protein_coding	20633455,20637842,20639892,20644490,20645560,20648505,20648995,20650434	20633935,20638129,20639992,20644672,20645723,20648632,20649231,20651511	Gene ID= ENSG00000158828.7 TPM= 54.88 Transcript Type= protein_coding
chr1	20742682	20786660	20742682	20786660	-	transcript2280.chr1.nic@HP1BP3	transcript2280.chr1.nic	protein_coding	20786514,20780345,20779812,20776597,20773451,20770930,20767584,20765377,20757166,20749723,20747544,20745543,20742682	20786660,20780540,20779911,20776750,20773610,20771073,20767664,20765531,20757256,20749882,20747655,20745656,20745091	Gene ID= ENSG00000127483.17 TPM= 15.33 Transcript Type= NA
chr1	20742661	20786688	20742661	20786688	-	ENST00000312239.9@HP1BP3	ENST00000312239.9	protein_coding	20786649,20780345,20779812,20776597,20773451,20770930,20767584,20765377,20757166,20749723,20747544,20745543,20742661	20786688,20780540,20779911,20776750,20773610,20771073,20767664,20765531,20757256,20749882,20747655,20745656,20745091	Gene ID= ENSG00000127483.17 TPM= 12.06 Transcript Type= protein_coding
chr1	20742682	20787516	20742682	20787516	-	transcript2283.chr1.nic@HP1BP3	transcript2283.chr1.nic	protein_coding	20787195,20780345,20779812,20776597,20773451,20770930,20767584,20765377,20757166,20749723,20747544,20745543,20742682	20787516,20780540,20779911,20776750,20773610,20771073,20767664,20765531,20757256,20749882,20747655,20745656,20745091	Gene ID= ENSG00000127483.17 TPM= 106.8 Transcript Type= NA
chr1	20742682	20787315	20742682	20787315	-	transcript2286.chr1.nnic@HP1BP3	transcript2286.chr1.nnic	protein_coding	20787195,20780345,20779812,20776597,20773451,20770930,20767584,20765377,20757168,20749723,20747544,20745543,20742682	20787315,20780540,20779911,20776750,20773610,20771073,20767664,20765531,20757256,20749977,20747655,20745656,20745091	Gene ID= ENSG00000127483.17 TPM= 14.3 Transcript Type= NA
chr1	20742682	20787345	20742682	20787345	-	transcript2307.chr1.nic@HP1BP3	transcript2307.chr1.nic	protein_coding	20787195,20779812,20776597,20773451,20770930,20767584,20765377,20757166,20749723,20747544,20745543,20742682	20787345,20779911,20776750,20773610,20771073,20767664,20765531,20757256,20749882,20747655,20745656,20745091	Gene ID= ENSG00000127483.17 TPM= 50.76 Transcript Type= NA
chr1	20742682	20787345	20742682	20787345	-	transcript2319.chr1.nic@HP1BP3	transcript2319.chr1.nic	protein_coding	20787195,20779812,20773451,20770930,20767584,20765377,20757166,20749723,20747544,20745543,20742682	20787345,20779911,20776750,20771073,20767664,20765531,20757256,20749882,20747655,20745656,20745091	Gene ID= ENSG00000127483.17 TPM= 81.01 Transcript Type= NA
chr1	20806470	21050994	20806470	21050994	-	ENST00000264211.12@EIF4G3	ENST00000264211.12	protein_coding	21050866,21002713,20981048,20980334,20973002,20969474,20950003,20941491,20904883,20899697,20895368,20893517,20886201,20879323,20865116,20864476,20862228,20860385,20857403,20854978,20853560,20851258,20849415,20840856,20829147,20827617,20825100,20817392,20813158,20810738,20806470	21050994,21002808,20981227,20980448,20973099,20969596,20950111,20942330,20904971,20899943,20895501,20893636,20886371,20879520,20865262,20864712,20862332,20860517,20857497,20855071,20853677,20851478,20849530,20841028,20829272,20827698,20825198,20817538,20813239,20810884,20807500	Gene ID= ENSG00000075151.20 TPM= 4.67 Transcript Type= protein_coding
chr1	21170370	21172740	21170370	21172740	+	transcript2342.chr1.nnic@NA	transcript2342.chr1.nnic	NA	21170370	21172740	Gene ID= novel_gene_chr1_2343 TPM= 3.5 Transcript Type= NA
chr1	21217247	21345504	21217247	21345504	-	ENST00000415912.6@ECE1	ENST00000415912.6	protein_coding	21345376,21290070,21279191,21272699,21260271,21258693,21257525,21255947,21247221,21244989,21238134,21236746,21235850,21233558,21227931,21227159,21225250,21221747,21217247	21345504,21290156,21279332,21272911,21260392,21258839,21257590,21256138,21247363,21245103,21238244,21236844,21235927,21233661,21228041,21227226,21225440,21221842,21220131	Gene ID= ENSG00000117298.14 TPM= 203.16 Transcript Type= protein_coding
chr1	21440066	21484900	21440066	21484900	+	transcript2368.chr1.nnic@NBPF3	transcript2368.chr1.nnic	protein_coding	21440066,21444948,21465735,21466087,21467182,21468441,21468688,21470632,21471569,21472843,21473380,21474900,21478144,21479349,21480051,21480930,21481597,21482484,21483143	21440348,21445219,21465817,21466156,21467309,21468585,21468897,21470734,21471783,21472915,21473585,21474951,21478307,21479400,21480223,21480981,21481769,21482535,21484900	Gene ID= ENSG00000142794.18 TPM= 4.09 Transcript Type= NA
chr1	21440066	21484900	21440066	21484900	+	transcript2372.chr1.nic@NBPF3	transcript2372.chr1.nic	protein_coding	21440066,21444948,21466087,21467182,21468441,21468688,21470632,21471569,21472843,21473380,21474900,21478144,21479349,21480051,21480930,21481597,21482484,21483143	21440348,21445219,21466156,21467309,21468585,21468897,21470734,21471783,21472915,21473585,21474951,21478307,21479400,21480223,21480981,21481769,21482535,21484900	Gene ID= ENSG00000142794.18 TPM= 6.42 Transcript Type= NA
chr1	21509372	21578412	21509372	21578412	+	ENST00000374840.7@ALPL	ENST00000374840.7	protein_coding	21509372,21553978,21560626,21561097,21563110,21564041,21568104,21570305,21573665,21575733,21576522,21577383	21509517,21554142,21560745,21561212,21563284,21564216,21568247,21570374,21573799,21575924,21576641,21578412	Gene ID= ENSG00000162551.13 TPM= 413.71 Transcript Type= protein_coding
chr1	21596215	21669363	21596215	21669363	-	ENST00000290101.8@RAP1GAP	ENST00000290101.8	protein_coding	21669254,21649761,21626304,21620015,21619025,21617934,21617306,21613986,21613628,21613176,21612026,21611716,21611452,21610120,21609575,21608850,21608213,21606066,21603658,21602804,21601684,21599581,21599494,21598400,21597961,21597686,21596215	21669363,21649796,21626397,21620050,21619072,21617972,21617491,21614089,21613706,21613229,21612109,21611816,21611581,21610275,21609646,21608936,21608350,21606197,21603912,21602913,21601797,21599617,21599575,21598502,21598064,21597728,21597264	Gene ID= ENSG00000076864.19 TPM= 3.77 Transcript Type= protein_coding
chr1	21596224	21600899	21596224	21600899	-	transcript2405.chr1.nic@RAP1GAP	transcript2405.chr1.nic	protein_coding	21599494,21596224	21600899,21598502	Gene ID= ENSG00000076864.19 TPM= 8.56 Transcript Type= NA
chr1	21596221	21622568	21596221	21622568	-	ENST00000374761.6@RAP1GAP	ENST00000374761.6	protein_coding	21622339,21620015,21619025,21617934,21617306,21613986,21613628,21613176,21612026,21611716,21611452,21610120,21609575,21608850,21608213,21606066,21602804,21601684,21599494,21598400,21597961,21597686,21596221	21622568,21620050,21619072,21617972,21617491,21614089,21613706,21613229,21612109,21611816,21611581,21610275,21609646,21608936,21608350,21606197,21602913,21601797,21599617,21598502,21598064,21597728,21597264	Gene ID= ENSG00000076864.19 TPM= 86.96 Transcript Type= protein_coding
chr1	21596221	21669306	21596221	21669306	-	ENST00000374765.8@RAP1GAP	ENST00000374765.8	protein_coding	21669254,21649761,21626304,21620015,21619025,21617934,21617306,21613986,21613628,21613176,21612026,21611716,21611452,21610120,21609575,21608850,21608213,21606066,21602804,21601684,21599494,21598400,21597961,21597686,21596221	21669306,21649796,21626397,21620050,21619072,21617972,21617491,21614089,21613706,21613229,21612109,21611816,21611581,21610275,21609646,21608936,21608350,21606197,21602913,21601797,21599617,21598502,21598064,21597728,21597264	Gene ID= ENSG00000076864.19 TPM= 20.41 Transcript Type= protein_coding
chr1	21596567	21600897	21596567	21600897	+	transcript2406.chr1.nnic@NA	transcript2406.chr1.nnic	NA	21596567	21600897	Gene ID= novel_gene_chr1_2407 TPM= 4.09 Transcript Type= NA
chr1	21678579	21783606	21678579	21783606	-	ENST00000308271.13@USP48	ENST00000308271.13	protein_coding	21782824,21757663,21756546,21752992,21752527,21751507,21748138,21747067,21736446,21729704,21728570,21723898,21721650,21721036,21715389,21706744,21706467,21706126,21705727,21704262,21703512,21701498,21695066,21689974,21687191,21680808,21678579	21783606,21757783,21756702,21753119,21752651,21751615,21748271,21747149,21736625,21729832,21728719,21724095,21721764,21721166,21715457,21706868,21706589,21706187,21705837,21704392,21703618,21701602,21695221,21690099,21687239,21680834,21679439	Gene ID= ENSG00000090686.15 TPM= 29.19 Transcript Type= protein_coding
chr1	21727851	21783606	21727851	21783606	-	ENST00000421625.6@USP48	ENST00000421625.6	protein_coding	21782824,21757663,21756546,21752992,21752527,21751507,21748138,21747067,21736446,21729704,21727851	21783606,21757783,21756702,21753119,21752651,21751615,21748271,21747149,21736625,21729832,21728719	Gene ID= ENSG00000090686.15 TPM= 14.01 Transcript Type= protein_coding
chr1	21819797	21823456	21819797	21823456	-	transcript2437.chr1.nnic@NA	transcript2437.chr1.nnic	NA	21819797	21823456	Gene ID= novel_gene_chr1_2438 TPM= 8.17 Transcript Type= NA
chr1	21822245	21937297	21822245	21937297	-	ENST00000374695.7@HSPG2	ENST00000374695.7	protein_coding	21937155,21896175,21895922,21890585,21890427,21889981,21887938,21887420,21887215,21885320,21885013,21884767,21884528,21881339,21880656,21880363,21880107,21878994,21878577,21878433,21878186,21876512,21876229,21875863,21875629,21874891,21874616,21874406,21873925,21873375,21872997,21872620,21872186,21865717,21865285,21864843,21864100,21861988,21861757,21860177,21859835,21859566,21857285,21857015,21855787,21855523,21855304,21854848,21854611,21854193,21852919,21852700,21852088,21851791,21851546,21850363,21850041,21848893,21848643,21847958,21847689,21847354,21846448,21846108,21844148,21843297,21842770,21842239,21842002,21841539,21841101,21839822,21839371,21838825,21836802,21835540,21834679,21833816,21833467,21833268,21832495,21831652,21831463,21831215,21830982,21829993,21829383,21828835,21828255,21828030,21827863,21824704,21824537,21824306,21824121,21823616,21822245	21937297,21896310,21895966,21890694,21890485,21890141,21888066,21887674,21887334,21885451,21885157,21884918,21884674,21881502,21880835,21880559,21880254,21879121,21878663,21878491,21878253,21876652,21876405,21876042,21875747,21875002,21874729,21874533,21874011,21873424,21873091,21872760,21872377,21865809,21865365,21865073,21864213,21862115,21861843,21860235,21860002,21859676,21857385,21857195,21855912,21855675,21855446,21854983,21854765,21854343,21853070,21852832,21852233,21851926,21851697,21850498,21850192,21849031,21848794,21848093,21847840,21847492,21846599,21846255,21844299,21843438,21842921,21842380,21842142,21841673,21841285,21840017,21839550,21839085,21837006,21835637,21834945,21833925,21833614,21833384,21832606,21831796,21831562,21831324,21831090,21830091,21829604,21829079,21828426,21828152,21827919,21824779,21824615,21824376,21824204,21823719,21823488	Gene ID= ENSG00000142798.17 TPM= 576.21 Transcript Type= protein_coding
chr1	21822245	21830713	21822245	21830713	-	ENST00000486901.1@HSPG2	ENST00000486901.1	protein_coding	21829383,21828835,21828255,21828030,21827863,21824704,21824537,21824306,21824121,21823616,21822245	21830713,21829079,21828426,21828152,21827919,21824779,21824615,21824376,21824204,21823719,21823488	Gene ID= ENSG00000142798.17 TPM= 181.56 Transcript Type= retained_intron
chr1	22025511	22031223	22025511	22031223	+	ENST00000416769.2@LINC00339	ENST00000416769.2	transcribed_processed_pseudogene	22025511,22030280	22025643,22031223	Gene ID= ENSG00000218510.7 TPM= 18.68 Transcript Type= processed_transcript
chr1	22052677	22092946	22052677	22092946	+	transcript2444.chr1.nic@CDC42	transcript2444.chr1.nic	protein_coding	22052677,22078429,22081722,22086439,22086669,22091428	22052742,22078583,22081794,22086548,22086866,22092946	Gene ID= ENSG00000070831.15 TPM= 27.64 Transcript Type= NA
chr1	22052668	22092946	22052668	22092946	+	ENST00000344548.7@CDC42	ENST00000344548.7	protein_coding	22052668,22074094,22078429,22081722,22086439,22086669,22091428	22052742,22074219,22078583,22081794,22086548,22086866,22092946	Gene ID= ENSG00000070831.15 TPM= 38.15 Transcript Type= protein_coding
chr1	22052689	22090804	22052689	22090804	+	ENST00000315554.12@CDC42	ENST00000315554.12	protein_coding	22052689,22078429,22081722,22086439,22086669,22089943	22052742,22078583,22081794,22086548,22086866,22090804	Gene ID= ENSG00000070831.15 TPM= 2.34 Transcript Type= protein_coding
chr1	22055869	22057541	22055869	22057541	-	transcript2448.chr1.nnic@NA	transcript2448.chr1.nnic	NA	22055869	22057541	Gene ID= novel_gene_chr1_2449 TPM= 9.34 Transcript Type= NA
chr1	22094296	22101423	22094296	22101423	-	transcript2452.chr1.nnic@NA	transcript2452.chr1.nnic	NA	22094296	22101423	Gene ID= novel_gene_chr1_2453 TPM= 22.18 Transcript Type= NA
chr1	22636506	22639608	22636506	22639608	+	ENST00000374642.7@C1QA	ENST00000374642.7	protein_coding	22636506,22637610,22638833	22636702,22637779,22639608	Gene ID= ENSG00000173372.16 TPM= 473.84 Transcript Type= protein_coding
chr1	22636614	22639608	22636614	22639608	+	transcript2475.chr1.nnic@C1QA	transcript2475.chr1.nnic	protein_coding	22636614,22638833	22636702,22639608	Gene ID= ENSG00000173372.16 TPM= 35.41 Transcript Type= NA
chr1	22643633	22648108	22643633	22648108	+	transcript2476.chr1.nnic@C1QC	transcript2476.chr1.nnic	protein_coding	22643633,22647227	22643714,22648108	Gene ID= ENSG00000159189.11 TPM= 26.47 Transcript Type= NA
chr1	22643630	22648110	22643630	22648110	+	ENST00000374640.8@C1QC	ENST00000374640.8	protein_coding	22643630,22644011,22647227	22643714,22644204,22648110	Gene ID= ENSG00000159189.11 TPM= 398.35 Transcript Type= protein_coding
chr1	22643633	22648110	22643633	22648110	+	ENST00000374639.7@C1QC	ENST00000374639.7	protein_coding	22643633,22644011,22647227	22643737,22644204,22648110	Gene ID= ENSG00000159189.11 TPM= 56.24 Transcript Type= protein_coding
chr1	22652981	22661538	22652981	22661538	+	ENST00000509305.5@C1QB	ENST00000509305.5	protein_coding	22652981,22659440,22660812	22653303,22659643,22661538	Gene ID= ENSG00000173369.15 TPM= 562.58 Transcript Type= protein_coding
chr1	22653189	22661536	22653189	22661536	+	ENST00000314933.6@C1QB	ENST00000314933.6	protein_coding	22653189,22659440,22660812	22653303,22659643,22661536	Gene ID= ENSG00000173369.15 TPM= 394.45 Transcript Type= protein_coding
chr1	22661927	22665779	22661927	22665779	+	transcript2493.chr1.nnic@NA	transcript2493.chr1.nnic	NA	22661927	22665779	Gene ID= novel_gene_chr1_2494 TPM= 2.34 Transcript Type= NA
chr1	23019431	23083686	23019431	23083686	+	transcript2497.chr1.nnic@KDM1A	transcript2497.chr1.nnic	protein_coding	23019431,23030469,23044427,23050387,23053761,23055069,23055932,23057484,23059073,23066060,23068539,23069061,23071225,23072124,23073292,23077228,23078990,23079553,23081446,23082220,23082450	23019947,23030634,23044486,23050520,23053839,23055161,23056038,23057565,23059167,23066071,23068681,23069151,23071359,23072197,23073403,23077360,23079177,23079667,23081573,23082366,23083686	Gene ID= ENSG00000004487.15 TPM= 11.68 Transcript Type= NA
chr1	23019431	23083686	23019431	23083686	+	transcript2504.chr1.nnic@KDM1A	transcript2504.chr1.nnic	protein_coding	23019431,23030469,23050387,23053761,23055069,23055932,23057484,23059073,23068539,23069061,23071225,23072124,23073292,23077228,23078990,23079553,23081446,23082220,23082450	23019947,23030634,23050520,23053839,23055161,23056038,23057565,23059167,23068681,23069151,23071359,23072197,23073403,23077360,23079177,23079667,23081573,23082366,23083686	Gene ID= ENSG00000004487.15 TPM= 8.17 Transcript Type= NA
chr1	23019448	23083689	23019448	23083689	+	ENST00000356634.7@KDM1A	ENST00000356634.7	protein_coding	23019448,23030469,23050387,23053761,23055069,23055932,23057484,23059073,23068539,23069061,23071225,23072124,23073292,23077228,23078990,23079553,23081446,23082220,23083179	23019947,23030634,23050520,23053839,23055161,23056038,23057565,23059167,23068681,23069151,23071359,23072197,23073403,23077360,23079177,23079667,23081573,23082366,23083689	Gene ID= ENSG00000004487.15 TPM= 84.65 Transcript Type= protein_coding
chr1	23019493	23083688	23019493	23083688	+	ENST00000400181.8@KDM1A	ENST00000400181.8	protein_coding	23019493,23030469,23044427,23050387,23053761,23055069,23055932,23057484,23059073,23066060,23068539,23069061,23071225,23072124,23073292,23077228,23078990,23079553,23081446,23082220,23083179	23019947,23030634,23044486,23050520,23053839,23055161,23056038,23057565,23059167,23066071,23068681,23069151,23071359,23072197,23073403,23077360,23079177,23079667,23081573,23082366,23083688	Gene ID= ENSG00000004487.15 TPM= 102.16 Transcript Type= protein_coding
chr1	23080699	23083684	23080699	23083684	+	transcript2518.chr1.nnic@NA	transcript2518.chr1.nnic	NA	23080699	23083684	Gene ID= novel_gene_chr1_2519 TPM= 2.34 Transcript Type= NA
chr1	23309786	23344322	23309786	23344322	-	ENST00000374612.5@HNRNPR	ENST00000374612.5	protein_coding	23344211,23340852,23338490,23337754,23333518,23323556,23321528,23318483,23313553,23311201,23309786	23344322,23341020,23338608,23337861,23333631,23323732,23321663,23318688,23313702,23311322,23311066	Gene ID= ENSG00000125944.19 TPM= 24.52 Transcript Type= protein_coding
chr1	23304688	23344336	23304688	23344336	-	ENST00000478691.5@HNRNPR	ENST00000478691.5	protein_coding	23344211,23338490,23337754,23333518,23323556,23321528,23318483,23313553,23311201,23304688	23344336,23338608,23337861,23333631,23323732,23321663,23318697,23313702,23311322,23311066	Gene ID= ENSG00000125944.19 TPM= 5.84 Transcript Type= protein_coding
chr1	23309788	23344262	23309788	23344262	-	ENST00000302271.10@HNRNPR	ENST00000302271.10	protein_coding	23344211,23340852,23338490,23337754,23333518,23323556,23321528,23318483,23313553,23311201,23309788	23344262,23341017,23338608,23337861,23333631,23323732,23321663,23318688,23313702,23311322,23311066	Gene ID= ENSG00000125944.19 TPM= 5.84 Transcript Type= protein_coding
chr1	23317235	23321175	23317235	23321175	+	transcript2532.chr1.nnic@NA	transcript2532.chr1.nnic	NA	23317235	23321175	Gene ID= novel_gene_chr1_2533 TPM= 5.84 Transcript Type= NA
chr1	23328176	23331420	23328176	23331420	+	transcript2534.chr1.nnic@NA	transcript2534.chr1.nnic	NA	23328176	23331420	Gene ID= novel_gene_chr1_2535 TPM= 24.52 Transcript Type= NA
chr1	23359975	23369957	23359975	23369957	-	transcript2567.chr1.nnic@ZNF436	transcript2567.chr1.nnic	protein_coding	23369366,23367042,23359975	23369957,23367168,23363221	Gene ID= ENSG00000125945.14 TPM= 2.34 Transcript Type= NA
chr1	23369236	23371782	23369236	23371782	+	ENST00000335648.3@ZNF436-AS1	ENST00000335648.3	antisense_RNA	23369236	23371782	Gene ID= ENSG00000249087.6 TPM= 1.17 Transcript Type= antisense_RNA
chr1	23381371	23424779	23381371	23424779	-	transcript2555.chr1.nnic@TCEA3	transcript2555.chr1.nnic	protein_coding	23424565,23419077,23417904,23417249,23408664,23397792,23397545,23393879,23387273,23384346,23381371	23424779,23419207,23418009,23417390,23408726,23397955,23397601,23394033,23387419,23384417,23381474	Gene ID= ENSG00000204219.9 TPM= 2.34 Transcript Type= NA
chr1	23383433	23424785	23383433	23424785	-	transcript2556.chr1.nic@TCEA3	transcript2556.chr1.nic	protein_coding	23424565,23419077,23417904,23417249,23408664,23397792,23397545,23393879,23387273,23384346,23383433	23424785,23419139,23418009,23417390,23408726,23397955,23397601,23394033,23387419,23384417,23384068	Gene ID= ENSG00000204219.9 TPM= 2.34 Transcript Type= NA
chr1	23381371	23424777	23381371	23424777	-	transcript2558.chr1.nnic@TCEA3	transcript2558.chr1.nnic	protein_coding	23424565,23417904,23417249,23408664,23397792,23397545,23393879,23387273,23384346,23381371	23424777,23418009,23417390,23408726,23397955,23397601,23394033,23387419,23384417,23381474	Gene ID= ENSG00000204219.9 TPM= 3.5 Transcript Type= NA
chr1	23381061	23424740	23381061	23424740	-	ENST00000450454.6@TCEA3	ENST00000450454.6	protein_coding	23424565,23419077,23417904,23417249,23408664,23397792,23397545,23393879,23387273,23384346,23381061	23424740,23419139,23418009,23417390,23408726,23397955,23397601,23394033,23387419,23384417,23381474	Gene ID= ENSG00000204219.9 TPM= 16.35 Transcript Type= protein_coding
chr1	23381371	23484214	23381371	23484214	-	transcript2536.chr1.nnic@ASAP3	transcript2536.chr1.nnic	protein_coding	23484005,23456122,23455881,23452697,23451479,23442501,23442186,23441655,23441387,23441102,23439161,23438747,23437424,23437130,23436911,23436560,23435851,23434533,23434254,23433626,23433425,23433077,23431696,23431035,23419077,23417904,23417249,23408664,23397792,23397545,23393879,23387273,23384346,23381371	23484214,23456194,23456026,23452771,23451528,23442612,23442271,23441730,23441473,23441211,23439230,23438834,23437472,23437320,23437044,23436654,23436028,23434618,23434369,23433693,23433532,23433272,23431918,23431125,23419139,23418009,23417390,23408726,23397955,23397601,23394033,23387419,23384417,23381474	Gene ID= ENSG00000088280.18 TPM= 2.34 Transcript Type= NA
chr1	23428563	23484198	23428563	23484198	-	transcript2537.chr1.nic@ASAP3	transcript2537.chr1.nic	protein_coding	23484005,23456122,23455881,23452697,23451479,23442501,23442186,23441655,23441387,23441102,23439161,23438747,23437424,23437130,23436911,23436560,23435851,23434533,23434254,23433626,23433362,23433077,23431696,23431035,23428563	23484198,23456194,23456026,23452771,23451528,23442612,23442271,23441730,23441473,23441211,23439230,23438834,23437472,23437320,23437044,23436654,23436028,23434618,23434369,23433693,23433532,23433272,23431918,23431125,23429930	Gene ID= ENSG00000088280.18 TPM= 6.22 Transcript Type= NA
chr1	23428563	23484200	23428563	23484200	-	transcript2544.chr1.nic@ASAP3	transcript2544.chr1.nic	protein_coding	23484005,23456122,23455881,23452697,23451479,23442501,23441655,23441387,23441102,23439161,23438747,23437424,23437130,23436911,23436560,23435851,23434533,23434254,23433626,23433425,23433077,23431696,23431035,23428563	23484200,23456194,23456026,23452771,23451528,23442612,23442271,23441473,23441211,23439230,23438834,23437472,23437320,23437044,23436654,23436028,23434618,23434369,23433693,23433532,23433272,23431918,23431125,23429930	Gene ID= ENSG00000088280.18 TPM= 10.31 Transcript Type= NA
chr1	23428563	23484178	23428563	23484178	-	ENST00000336689.7@ASAP3	ENST00000336689.7	protein_coding	23484005,23456122,23455881,23452697,23451479,23442501,23442186,23441655,23441387,23441102,23439161,23438747,23437424,23437130,23436911,23436560,23435851,23434533,23434254,23433626,23433425,23433077,23431696,23431035,23428563	23484178,23456194,23456026,23452771,23451528,23442612,23442271,23441730,23441473,23441211,23439230,23438834,23437472,23437320,23437044,23436654,23436028,23434618,23434369,23433693,23433532,23433272,23431918,23431125,23429930	Gene ID= ENSG00000088280.18 TPM= 50.01 Transcript Type= protein_coding
chr1	23557918	23559794	23557918	23559794	-	ENST00000374561.5@ID3	ENST00000374561.5	protein_coding	23559127,23558935,23557918	23559794,23559019,23558415	Gene ID= ENSG00000117318.8 TPM= 579.13 Transcript Type= protein_coding
chr1	23557925	23559505	23557925	23559505	-	transcript2573.chr1.nnic@NA	transcript2573.chr1.nnic	NA	23557925	23559505	Gene ID= novel_gene_chr1_2574 TPM= 25.69 Transcript Type= NA
chr1	23691779	23696425	23691779	23696425	+	ENST00000374550.7@RPL11	ENST00000374550.7	protein_coding	23691779,23692609,23693807,23694660,23695798,23696344	23691829,23692759,23693913,23694791,23695908,23696425	Gene ID= ENSG00000142676.12 TPM= 622.91 Transcript Type= protein_coding
chr1	23691781	23696418	23691781	23696418	+	transcript2579.chr1.nic@RPL11	transcript2579.chr1.nic	protein_coding	23691781,23692609,23693807,23694660,23696344	23691829,23692759,23693913,23695908,23696418	Gene ID= ENSG00000142676.12 TPM= 20.43 Transcript Type= NA
chr1	23743155	23759893	23743155	23759893	+	transcript2586.chr1.nnic@ELOA	transcript2586.chr1.nnic	protein_coding	23743155,23749021,23749842,23750845,23752407,23754117,23754363,23755843,23756274,23756953,23759512	23743578,23749077,23749948,23752030,23752518,23754255,23754460,23756023,23756385,23757125,23759893	Gene ID= ENSG00000011007.12 TPM= 4.67 Transcript Type= NA
chr1	23743472	23759893	23743472	23759893	+	ENST00000609199.1@ELOA	ENST00000609199.1	protein_coding	23743472,23749021,23749842,23750845,23752407,23754100,23754363,23755843,23756274,23756953,23759512	23743578,23749077,23749948,23752030,23752518,23754255,23754460,23756023,23756385,23757125,23759893	Gene ID= ENSG00000011007.12 TPM= 35.03 Transcript Type= protein_coding
chr1	23760382	23778287	23760382	23778287	-	ENST00000427796.5@ELOA-AS1	ENST00000427796.5	antisense_RNA	23778199,23772268,23772111,23760382	23778287,23772426,23772166,23761151	Gene ID= ENSG00000236810.5 TPM= 1.17 Transcript Type= antisense_RNA
chr1	23778405	23788232	23778405	23788232	+	ENST00000246151.8@PITHD1	ENST00000246151.8	protein_coding	23778405,23779438,23779864,23785675,23786315,23787275	23778713,23779481,23779941,23785779,23786423,23788232	Gene ID= ENSG00000057757.9 TPM= 61.88 Transcript Type= protein_coding
chr1	23790970	23795539	23790970	23795539	+	ENST00000374514.7@LYPLA2	ENST00000374514.7	protein_coding	23790970,23792657,23793008,23793151,23793705,23793860,23794063,23794224,23794427,23794682	23791250,23792760,23793039,23793216,23793752,23793930,23794136,23794325,23794600,23795539	Gene ID= ENSG00000011009.10 TPM= 154.12 Transcript Type= protein_coding
chr1	23795599	23800752	23795599	23800752	-	transcript2597.chr1.nic@GALE	transcript2597.chr1.nic	protein_coding	23799366,23798887,23798615,23798117,23797695,23797034,23796876,23796697,23796509,23796151,23795599	23800752,23799012,23798730,23798230,23797871,23797147,23796942,23796782,23796586,23796265,23796007	Gene ID= ENSG00000117308.14 TPM= 16.73 Transcript Type= NA
chr1	23795599	23800804	23795599	23800804	-	ENST00000617979.4@GALE	ENST00000617979.4	protein_coding	23800712,23799366,23798887,23798615,23798117,23797695,23797034,23796876,23796697,23796509,23796151,23795599	23800804,23799436,23799012,23798730,23798230,23797871,23797147,23796942,23796782,23796586,23796265,23796007	Gene ID= ENSG00000117308.14 TPM= 100.8 Transcript Type= protein_coding
chr1	23801885	23825459	23801885	23825459	-	ENST00000374490.7@HMGCL	ENST00000374490.7	protein_coding	23825356,23820510,23817476,23816675,23814190,23810736,23808135,23804400,23801885	23825459,23820593,23817583,23816770,23814338,23810799,23808323,23804525,23802564	Gene ID= ENSG00000117305.14 TPM= 98.08 Transcript Type= protein_coding
chr1	23845077	23868294	23845077	23868294	-	ENST00000374479.3@FUCA1	ENST00000374479.3	protein_coding	23867898,23865491,23863134,23859798,23854360,23848649,23846074,23845077	23868294,23865625,23863271,23859903,23854560,23848839,23846173,23845855	Gene ID= ENSG00000179163.11 TPM= 140.11 Transcript Type= protein_coding
chr1	23966445	23980927	23966445	23980927	-	ENST00000341154.10@SRSF10	ENST00000341154.10	protein_coding	23980191,23978653,23977911,23974974,23971850,23971573,23966445	23980927,23978817,23978273,23975051,23972012,23971626,23967723	Gene ID= ENSG00000188529.14 TPM= 3.5 Transcript Type= processed_transcript
chr1	23970364	23980400	23970364	23980400	-	transcript2658.chr1.nic@SRSF10	transcript2658.chr1.nic	protein_coding	23980191,23978653,23974974,23971850,23971573,23970364	23980400,23978817,23978273,23972012,23971626,23971439	Gene ID= ENSG00000188529.14 TPM= 11.68 Transcript Type= NA
chr1	23966445	23980296	23966445	23980296	-	ENST00000453840.7@SRSF10	ENST00000453840.7	protein_coding	23980191,23978713,23974974,23971850,23971573,23966445	23980296,23978817,23975077,23972012,23971623,23967723	Gene ID= ENSG00000188529.14 TPM= 22.18 Transcript Type= protein_coding
chr1	23970364	23980319	23970364	23980319	-	ENST00000492112.2@SRSF10	ENST00000492112.2	protein_coding	23980191,23978713,23974974,23971850,23971573,23970364	23980319,23978817,23975077,23972012,23971626,23971439	Gene ID= ENSG00000188529.14 TPM= 22.18 Transcript Type= protein_coding
chr1	24119771	24143121	24119771	24143121	-	ENST00000270800.1@IL22RA1	ENST00000270800.1	protein_coding	24143040,24138582,24137131,24134211,24128141,24123302,24119771	24143121,24138714,24137309,24134386,24128279,24123423,24121737	Gene ID= ENSG00000142677.3 TPM= 2.34 Transcript Type= protein_coding
chr1	24154157	24187287	24154157	24187287	-	transcript2675.chr1.nnic@IFNLR1	transcript2675.chr1.nnic	protein_coding	24187191,24169417,24161542,24159474,24159052,24154157	24187287,24169601,24161684,24159633,24159182,24157891	Gene ID= ENSG00000185436.11 TPM= 3.5 Transcript Type= NA
chr1	24154157	24187261	24154157	24187261	-	ENST00000327535.5@IFNLR1	ENST00000327535.5	protein_coding	24187191,24180731,24169417,24161542,24159474,24159052,24154157	24187261,24180854,24169601,24161684,24159633,24159182,24157891	Gene ID= ENSG00000185436.11 TPM= 24.52 Transcript Type= protein_coding
chr1	24357005	24416934	24357005	24416934	-	ENST00000468303.5@STPG1	ENST00000468303.5	protein_coding	24413674,24401319,24391924,24391561,24383902,24379653,24373702,24369674,24360851,24357005	24416934,24401456,24392067,24391679,24384003,24379823,24373810,24369839,24361041,24358619	Gene ID= ENSG00000001460.17 TPM= 1.75 Transcript Type= processed_transcript
chr1	24357000	24413772	24357000	24413772	-	ENST00000337248.8@STPG1	ENST00000337248.8	protein_coding	24413674,24401319,24391561,24383902,24379653,24373702,24369674,24360851,24357000	24413772,24401456,24391679,24384003,24379823,24373810,24369839,24361041,24358619	Gene ID= ENSG00000001460.17 TPM= 8.76 Transcript Type= protein_coding
chr1	24415769	24472976	24415769	24472976	+	transcript2684.chr1.nnic@NIPAL3	transcript2684.chr1.nnic	protein_coding	24415769,24419291,24440090,24442055,24445185,24449481,24453408,24456138,24458888,24460481,24464026,24468986	24415904,24419640,24440240,24442226,24445244,24449626,24453504,24456273,24458976,24460544,24464120,24472976	Gene ID= ENSG00000001461.16 TPM= 4.29 Transcript Type= NA
chr1	24413499	24472976	24413499	24472976	+	transcript2692.chr1.nnic@NIPAL3	transcript2692.chr1.nnic	protein_coding	24413499,24440172,24442055,24445185,24449481,24453408,24456138,24458888,24460481,24464026,24468986	24413774,24440240,24442226,24445244,24449626,24453504,24456273,24458976,24460544,24464120,24472976	Gene ID= ENSG00000001461.16 TPM= 4.29 Transcript Type= NA
chr1	24415771	24472976	24415771	24472976	+	transcript2694.chr1.nnic@NIPAL3	transcript2694.chr1.nnic	protein_coding	24415771,24440172,24442055,24445185,24449481,24453408,24456138,24458888,24460481,24464026,24468986	24415904,24440240,24442226,24445244,24449626,24453504,24456273,24458976,24460544,24464120,24472976	Gene ID= ENSG00000001461.16 TPM= 4.29 Transcript Type= NA
chr1	24415814	24466310	24415814	24466310	+	ENST00000339255.2@NIPAL3	ENST00000339255.2	protein_coding	24415814,24419291,24440172,24442055,24445185,24449481,24453408,24456138,24458888,24460481,24464026,24466004	24415904,24419640,24440240,24442226,24445244,24449626,24453504,24456273,24458976,24460544,24464120,24466310	Gene ID= ENSG00000001461.16 TPM= 3.5 Transcript Type= protein_coding
chr1	24415812	24420128	24415812	24420128	+	ENST00000488155.1@NIPAL3	ENST00000488155.1	protein_coding	24415812,24419291	24415904,24420128	Gene ID= ENSG00000001461.16 TPM= 3.5 Transcript Type= processed_transcript
chr1	24415794	24469307	24415794	24469307	+	ENST00000374399.8@NIPAL3	ENST00000374399.8	protein_coding	24415794,24419291,24440172,24442055,24445185,24449481,24453408,24456138,24458888,24460481,24464026,24468986	24415904,24419640,24440240,24442226,24445244,24449626,24453504,24456273,24458976,24460544,24464120,24469307	Gene ID= ENSG00000001461.16 TPM= 2.34 Transcript Type= protein_coding
chr1	24472010	24474238	24472010	24474238	-	transcript2706.chr1.nnic@NA	transcript2706.chr1.nnic	NA	24472010	24474238	Gene ID= novel_gene_chr1_2707 TPM= 4.67 Transcript Type= NA
chr1	24502814	24537019	24502814	24537019	+	transcript2711.chr1.nic@RCAN3	transcript2711.chr1.nic	protein_coding	24502814,24514314,24531218,24533083,24535093	24503117,24514567,24531391,24533254,24537019	Gene ID= ENSG00000117602.11 TPM= 11.68 Transcript Type= NA
chr1	24502897	24541040	24502897	24541040	+	ENST00000374395.8@RCAN3	ENST00000374395.8	protein_coding	24502897,24514314,24531218,24533083,24535093	24503150,24514567,24531391,24533254,24541040	Gene ID= ENSG00000117602.11 TPM= 8.17 Transcript Type= protein_coding
chr1	24502351	24537019	24502351	24537019	+	ENST00000538532.5@RCAN3	ENST00000538532.5	protein_coding	24502351,24514314,24531218,24533083,24535093	24502463,24514567,24531391,24533254,24537019	Gene ID= ENSG00000117602.11 TPM= 1.17 Transcript Type= protein_coding
chr1	24556066	24609324	24556066	24609324	+	transcript2717.chr1.nnic@NCMAP	transcript2717.chr1.nnic	protein_coding	24556066,24595424,24600940,24605606,24607827	24556169,24595512,24601024,24607030,24609324	Gene ID= ENSG00000184454.6 TPM= 4.67 Transcript Type= NA
chr1	24556062	24557043	24556062	24557043	+	transcript2723.chr1.nnic@NCMAP	transcript2723.chr1.nnic	protein_coding	24556062,24556447	24556169,24557043	Gene ID= ENSG00000184454.6 TPM= 7.01 Transcript Type= NA
chr1	24556111	24609325	24556111	24609325	+	ENST00000374392.2@NCMAP	ENST00000374392.2	protein_coding	24556111,24595424,24600940,24605606	24556169,24595512,24601024,24609325	Gene ID= ENSG00000184454.6 TPM= 23.35 Transcript Type= protein_coding
chr1	24643258	24673267	24643258	24673267	+	transcript2728.chr1.nic@SRRM1	transcript2728.chr1.nic	protein_coding	24643258,24645984,24646667,24648859,24649971,24651409,24652434,24652913,24654855,24660719,24661310,24662660,24663183,24666815,24669123,24670120,24671386,24672182	24643347,24646073,24646789,24649029,24650086,24651612,24652628,24653032,24655129,24660799,24661396,24662804,24663224,24666925,24669587,24670315,24671595,24673267	Gene ID= ENSG00000133226.16 TPM= 28.02 Transcript Type= NA
chr1	24643012	24673267	24643012	24673267	+	ENST00000323848.13@SRRM1	ENST00000323848.13	protein_coding	24643012,24645984,24646667,24648859,24649971,24651409,24652434,24652913,24654855,24660719,24661310,24662660,24666815,24669123,24670120,24671386,24672182	24643347,24646073,24646789,24649029,24650086,24651612,24652628,24653032,24655129,24660799,24661396,24662804,24666925,24669587,24670315,24671595,24673267	Gene ID= ENSG00000133226.16 TPM= 33.86 Transcript Type= protein_coding
chr1	24745357	24844324	24745357	24844324	+	ENST00000374379.8@CLIC4	ENST00000374379.8	protein_coding	24745357,24797742,24814094,24827010,24839860,24840773	24745625,24797851,24814219,24827116,24840041,24844324	Gene ID= ENSG00000169504.14 TPM= 228.26 Transcript Type= protein_coding
chr1	24924481	24930276	24924481	24930276	-	transcript2759.chr1.nic@RUNX3	transcript2759.chr1.nic	protein_coding	24929587,24924481	24930276,24927730	Gene ID= ENSG00000020633.18 TPM= 4.67 Transcript Type= NA
chr1	24948611	24951221	24948611	24951221	+	transcript2760.chr1.nnic@NA	transcript2760.chr1.nnic	NA	24948611	24951221	Gene ID= novel_gene_chr1_2761 TPM= 2.34 Transcript Type= NA
chr1	25222679	25232493	25222679	25232493	-	ENST00000236273.8@SYF2	ENST00000236273.8	protein_coding	25232444,25232104,25228998,25228118,25227442,25225002,25222679	25232493,25232211,25229123,25228235,25227532,25225100,25223431	Gene ID= ENSG00000117614.9 TPM= 24.52 Transcript Type= protein_coding
chr1	25242255	25247476	25242255	25247476	-	transcript2782.chr1.nic@RSRP1	transcript2782.chr1.nic	protein_coding	25247309,25246444,25245150,25244454,25243550,25242255	25247476,25247029,25245301,25244498,25244224,25242705	Gene ID= ENSG00000117616.17 TPM= 2.34 Transcript Type= NA
chr1	25242255	25247454	25242255	25247454	-	transcript2786.chr1.nnic@RSRP1	transcript2786.chr1.nnic	protein_coding	25247309,25246444,25244181,25243550,25242255	25247454,25247029,25245301,25243641,25242705	Gene ID= ENSG00000117616.17 TPM= 2.34 Transcript Type= NA
chr1	25242255	25247594	25242255	25247594	-	transcript2788.chr1.nic@RSRP1	transcript2788.chr1.nic	protein_coding	25247309,25246444,25245150,25243550,25242255	25247594,25247029,25245301,25244498,25242705	Gene ID= ENSG00000117616.17 TPM= 12.84 Transcript Type= NA
chr1	25242249	25247454	25242249	25247454	-	ENST00000498238.1@RSRP1	ENST00000498238.1	protein_coding	25247309,25246444,25243550,25242249	25247454,25247029,25245301,25242705	Gene ID= ENSG00000117616.17 TPM= 19.85 Transcript Type= retained_intron
chr1	25242255	25247457	25242255	25247457	-	ENST00000568254.5@RSRP1	ENST00000568254.5	protein_coding	25247309,25246444,25245150,25243550,25242255	25247457,25247029,25245301,25244224,25242705	Gene ID= ENSG00000117616.17 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr1	25307848	25312953	25307848	25312953	+	transcript2799.chr1.nnic@NA	transcript2799.chr1.nnic	NA	25307848	25312953	Gene ID= novel_gene_chr1_2800 TPM= 3.5 Transcript Type= NA
chr1	25335802	25338244	25335802	25338244	-	transcript2801.chr1.nnic@NA	transcript2801.chr1.nnic	NA	25335802	25338244	Gene ID= novel_gene_chr1_2802 TPM= 3.5 Transcript Type= NA
chr1	25337917	25362361	25337917	25362361	+	ENST00000374358.4@TMEM50A	ENST00000374358.4	protein_coding	25337917,25340474,25342961,25351626,25352882,25356793,25360660	25338456,25340579,25343073,25351693,25352974,25356853,25362361	Gene ID= ENSG00000183726.10 TPM= 127.27 Transcript Type= protein_coding
chr1	25338442	25362361	25338442	25362361	+	transcript2775.chr1.nic@TMEM50A	transcript2775.chr1.nic	protein_coding	25338442,25340474,25342961,25351626,25352882,25356793,25360660	25338817,25340579,25343073,25351693,25352974,25356853,25362361	Gene ID= ENSG00000183726.10 TPM= 5.84 Transcript Type= NA
chr1	25338320	25361265	25338320	25361265	+	ENST00000491936.5@TMEM50A	ENST00000491936.5	protein_coding	25338320,25351626,25352882,25356793,25360660	25338456,25351693,25352974,25356853,25361265	Gene ID= ENSG00000183726.10 TPM= 1.17 Transcript Type= processed_transcript
chr1	25430853	25485722	25430853	25485722	+	transcript2809.chr1.nic@TMEM57	transcript2809.chr1.nic	protein_coding	25430853,25446762,25448808,25454259,25456653,25458391,25484116,25485613	25431178,25446903,25448934,25454382,25456831,25458892,25484274,25485722	Gene ID= ENSG00000204178.9 TPM= 2.34 Transcript Type= NA
chr1	25543627	25568886	25543627	25568886	+	transcript2814.chr1.nnic@LDLRAP1	transcript2814.chr1.nnic	protein_coding	25543627,25553922,25554860,25557153,25562644,25563070,25563661,25565173,25566848	25543786,25554020,25554972,25557267,25562716,25563153,25563791,25565207,25568886	Gene ID= ENSG00000157978.11 TPM= 2.34 Transcript Type= NA
chr1	25543950	25568886	25543950	25568886	+	transcript2820.chr1.nnic@LDLRAP1	transcript2820.chr1.nnic	protein_coding	25543950,25553922,25554860,25557153,25562644,25563070,25563661,25565173,25566848	25544341,25554064,25554972,25557267,25562716,25563153,25563791,25565207,25568886	Gene ID= ENSG00000157978.11 TPM= 2.34 Transcript Type= NA
chr1	25543580	25568886	25543580	25568886	+	ENST00000374338.4@LDLRAP1	ENST00000374338.4	protein_coding	25543580,25553922,25554860,25557153,25562644,25563070,25563661,25565173,25566848	25543786,25554064,25554972,25557267,25562716,25563153,25563791,25565207,25568886	Gene ID= ENSG00000157978.11 TPM= 159.96 Transcript Type= protein_coding
chr1	25565546	25567441	25565546	25567441	-	transcript2825.chr1.nnic@NA	transcript2825.chr1.nnic	NA	25565546	25567441	Gene ID= novel_gene_chr1_2826 TPM= 7.01 Transcript Type= NA
chr1	25800176	25818224	25800176	25818224	+	ENST00000361547.6@SELENON	ENST00000361547.6	protein_coding	25800176,25801043,25802016,25805142,25808580,25809026,25809683,25811454,25811691,25812687,25813881,25814077,25815548	25800413,25801160,25802117,25805275,25808789,25809150,25809820,25811535,25811879,25812792,25813993,25814178,25818224	Gene ID= ENSG00000162430.16 TPM= 53.71 Transcript Type= protein_coding
chr1	25800193	25818221	25800193	25818221	+	ENST00000374315.1@SELENON	ENST00000374315.1	protein_coding	25800193,25801043,25805142,25808580,25809026,25809683,25811454,25811691,25812687,25813881,25814077,25815548	25800413,25801160,25805275,25808789,25809150,25809820,25811535,25811879,25812792,25813993,25814178,25818221	Gene ID= ENSG00000162430.16 TPM= 66.55 Transcript Type= protein_coding
chr1	25819926	25832942	25819926	25832942	+	transcript2841.chr1.nic@MTFR1L	transcript2841.chr1.nic	protein_coding	25819926,25823019,25823238,25823644,25826302,25826615,25829509,25831921	25820029,25823128,25823323,25823748,25826411,25826826,25829830,25832942	Gene ID= ENSG00000117640.17 TPM= 5.06 Transcript Type= NA
chr1	25819906	25832941	25819906	25832941	+	ENST00000374303.6@MTFR1L	ENST00000374303.6	protein_coding	25819906,25823019,25823644,25826302,25826615,25829509,25831921	25820029,25823128,25823748,25826411,25826826,25829830,25832941	Gene ID= ENSG00000117640.17 TPM= 65.19 Transcript Type= protein_coding
chr1	25819929	25832942	25819929	25832942	+	ENST00000474295.5@MTFR1L	ENST00000474295.5	protein_coding	25819929,25823019,25823644,25826302,25826615,25829618,25831921	25820029,25823128,25823748,25826411,25826826,25829830,25832942	Gene ID= ENSG00000117640.17 TPM= 17.9 Transcript Type= protein_coding
chr1	25819926	25832942	25819926	25832942	+	transcript2853.chr1.nic@MTFR1L	transcript2853.chr1.nic	protein_coding	25819926,25823019,25826302,25826615,25829509,25831921	25820029,25823748,25826411,25826826,25829830,25832942	Gene ID= ENSG00000117640.17 TPM= 9.73 Transcript Type= NA
chr1	25820003	25832938	25820003	25832938	+	ENST00000374307.9@MTFR1L	ENST00000374307.9	protein_coding	25820003,25823019,25823644,25826302,25826615,25829545,25831921	25820029,25823128,25823748,25826411,25826826,25829830,25832938	Gene ID= ENSG00000117640.17 TPM= 4.47 Transcript Type= protein_coding
chr1	25820193	25832938	25820193	25832938	+	ENST00000374301.7@MTFR1L	ENST00000374301.7	protein_coding	25820193,25823019,25823644,25826302,25826615,25829509,25831921	25820414,25823128,25823748,25826411,25826826,25829830,25832938	Gene ID= ENSG00000117640.17 TPM= 8.56 Transcript Type= protein_coding
chr1	25861484	25875516	25861484	25875516	-	transcript2858.chr1.nnic@PAQR7	transcript2858.chr1.nnic	protein_coding	25875488,25870609,25861484	25875516,25870694,25863861	Gene ID= ENSG00000182749.5 TPM= 2.34 Transcript Type= NA
chr1	25874184	25875934	25874184	25875934	-	transcript2859.chr1.nnic@NA	transcript2859.chr1.nnic	NA	25874184	25875934	Gene ID= novel_gene_chr1_2860 TPM= 2.34 Transcript Type= NA
chr1	25900102	25906466	25900102	25906466	-	ENST00000455785.6@STMN1	ENST00000455785.6	protein_coding	25906389,25904664,25903641,25901491,25900102	25906466,25904738,25903813,25901682,25901087	Gene ID= ENSG00000117632.22 TPM= 2.34 Transcript Type= protein_coding
chr1	25960770	25998083	25960770	25998083	-	transcript2864.chr1.nic@PAFAH2	transcript2864.chr1.nic	protein_coding	25998025,25997448,25990727,25989448,25988231,25984460,25983946,25982364,25976682,25974480,25972558,25960770	25998083,25997621,25990863,25989601,25988327,25984528,25984087,25982477,25976773,25974650,25972712,25962083	Gene ID= ENSG00000158006.13 TPM= 4.67 Transcript Type= NA
chr1	25959767	25998157	25959767	25998157	-	ENST00000374282.7@PAFAH2	ENST00000374282.7	protein_coding	25998025,25990727,25989448,25988231,25984460,25983946,25982364,25976682,25974480,25972558,25959767	25998157,25990863,25989601,25988327,25984528,25984087,25982477,25976773,25974650,25972712,25962083	Gene ID= ENSG00000158006.13 TPM= 11.68 Transcript Type= protein_coding
chr1	26159008	26163961	26159008	26163961	+	transcript2875.chr1.nnic@FAM110D	transcript2875.chr1.nnic	protein_coding	26159008,26161212,26163648	26159126,26163321,26163961	Gene ID= ENSG00000197245.5 TPM= 11.09 Transcript Type= NA
chr1	26159079	26162639	26159079	26162639	+	transcript2877.chr1.nnic@FAM110D	transcript2877.chr1.nnic	protein_coding	26159079,26160052,26161212	26159126,26160605,26162639	Gene ID= ENSG00000197245.5 TPM= 16.93 Transcript Type= NA
chr1	26169871	26170873	26169871	26170873	+	ENST00000374266.6@ZNF593	ENST00000374266.6	protein_coding	26169871,26170418,26170575	26170183,26170480,26170873	Gene ID= ENSG00000142684.8 TPM= 23.35 Transcript Type= protein_coding
chr1	26177403	26189886	26177403	26189886	+	ENST00000361530.10@CNKSR1	ENST00000361530.10	protein_coding	26177403,26180453,26180715,26181857,26182361,26182480,26183197,26183346,26183729,26184071,26184214,26184401,26184585,26185014,26187168,26187411,26188234,26188442,26188598,26188772,26189279	26177599,26180610,26180896,26181941,26182402,26182584,26183256,26183414,26183830,26184141,26184287,26184507,26184612,26185186,26187241,26187482,26188307,26188503,26188697,26188953,26189886	Gene ID= ENSG00000142675.17 TPM= 18.68 Transcript Type= protein_coding
chr1	26234174	26278807	26234174	26278807	+	transcript2896.chr1.nic@CEP85	transcript2896.chr1.nic	protein_coding	26234174,26239762,26244166,26255171,26257597,26258143,26259617,26268483,26269460,26271014,26272021,26274964,26276535,26277136	26234310,26239838,26244318,26255865,26257730,26258260,26259802,26268635,26269614,26271107,26272071,26275071,26276760,26278807	Gene ID= ENSG00000130695.14 TPM= 14.01 Transcript Type= NA
chr1	26234202	26278808	26234202	26278808	+	ENST00000252992.8@CEP85	ENST00000252992.8	protein_coding	26234202,26239762,26244166,26255171,26257597,26258143,26259617,26268483,26269460,26271014,26272021,26274964,26276535,26277133	26234310,26239838,26244318,26255865,26257730,26258260,26259802,26268635,26269614,26271107,26272071,26275071,26276760,26278808	Gene ID= ENSG00000130695.14 TPM= 16.35 Transcript Type= protein_coding
chr1	26279176	26281522	26279176	26281522	+	ENST00000270792.9@SH3BGRL3	ENST00000270792.9	protein_coding	26279176,26280765,26281058	26280203,26280932,26281522	Gene ID= ENSG00000142669.14 TPM= 363.12 Transcript Type= protein_coding
chr1	26282282	26306824	26282282	26306824	-	transcript2904.chr1.nic@UBXN11	transcript2904.chr1.nic	protein_coding	26306592,26302813,26301694,26300926,26297962,26297427,26296919,26294205,26285823,26285464,26284362,26284142,26282864,26282649,26282282	26306824,26302918,26301722,26301024,26298062,26297481,26296995,26294331,26286037,26285541,26284482,26284245,26282937,26282789,26282569	Gene ID= ENSG00000158062.20 TPM= 6.07 Transcript Type= NA
chr1	26282282	26306786	26282282	26306786	-	transcript2907.chr1.nic@UBXN11	transcript2907.chr1.nic	protein_coding	26306592,26303043,26302813,26301694,26297962,26297427,26296919,26294205,26285823,26284362,26284142,26282864,26282649,26282282	26306786,26303167,26302918,26301722,26298062,26297481,26296995,26294331,26286037,26285541,26284245,26282937,26282789,26282569	Gene ID= ENSG00000158062.20 TPM= 4.76 Transcript Type= NA
chr1	26282282	26306741	26282282	26306741	-	transcript2910.chr1.nic@UBXN11	transcript2910.chr1.nic	protein_coding	26306592,26301694,26297962,26297427,26296919,26294205,26285823,26285464,26284362,26284142,26282864,26282649,26282282	26306741,26301722,26298062,26297481,26296995,26294331,26286037,26285541,26284482,26284245,26282937,26282789,26282569	Gene ID= ENSG00000158062.20 TPM= 7.24 Transcript Type= NA
chr1	26282282	26306638	26282282	26306638	-	transcript2915.chr1.nic@UBXN11	transcript2915.chr1.nic	protein_coding	26306592,26301694,26297962,26297427,26296919,26294205,26285823,26284362,26284142,26282864,26282649,26282282	26306638,26301722,26298062,26297481,26296995,26294331,26286037,26285541,26284245,26282937,26282789,26282569	Gene ID= ENSG00000158062.20 TPM= 7.09 Transcript Type= NA
chr1	26282282	26306636	26282282	26306636	-	transcript2921.chr1.nic@UBXN11	transcript2921.chr1.nic	protein_coding	26306592,26301694,26297962,26297427,26296919,26285823,26284362,26284142,26282864,26282649,26282282	26306636,26301722,26298062,26297481,26296995,26286037,26285541,26284245,26282937,26282789,26282569	Gene ID= ENSG00000158062.20 TPM= 8.25 Transcript Type= NA
chr1	26282281	26306640	26282281	26306640	-	ENST00000472155.5@UBXN11	ENST00000472155.5	protein_coding	26306592,26302813,26301694,26300926,26297962,26297427,26296919,26294205,26285823,26284362,26284142,26282864,26282649,26282281	26306640,26302918,26301722,26301024,26298062,26297481,26296995,26294331,26286037,26285541,26284245,26282937,26282789,26282569	Gene ID= ENSG00000158062.20 TPM= 10.59 Transcript Type= retained_intron
chr1	26282282	26306636	26282282	26306636	-	ENST00000475591.5@UBXN11	ENST00000475591.5	protein_coding	26306592,26302813,26301694,26297962,26297427,26296919,26294205,26285823,26284362,26284142,26282864,26282649,26282282	26306636,26302918,26301722,26298062,26297481,26296995,26294331,26286037,26285541,26284245,26282937,26282789,26282569	Gene ID= ENSG00000158062.20 TPM= 18.76 Transcript Type= retained_intron
chr1	26282284	26306645	26282284	26306645	-	ENST00000374221.7@UBXN11	ENST00000374221.7	protein_coding	26306592,26303043,26302813,26301694,26300926,26297962,26297427,26296919,26294205,26285823,26285464,26284362,26284142,26282864,26282649,26282284	26306645,26303167,26302918,26301722,26301024,26298062,26297481,26296995,26294331,26286037,26285541,26284482,26284245,26282937,26282789,26282569	Gene ID= ENSG00000158062.20 TPM= 1.17 Transcript Type= protein_coding
chr1	26317958	26320523	26317958	26320523	+	transcript2933.chr1.nnic@CD52	transcript2933.chr1.nnic	protein_coding	26317958,26318528,26320171	26318071,26319095,26320523	Gene ID= ENSG00000169442.8 TPM= 4.67 Transcript Type= NA
chr1	26317957	26320523	26317957	26320523	+	ENST00000374213.2@CD52	ENST00000374213.2	protein_coding	26317957,26320171	26318071,26320523	Gene ID= ENSG00000169442.8 TPM= 185.65 Transcript Type= protein_coding
chr1	26432282	26471294	26432282	26471294	+	ENST00000434391.6@DHDDS	ENST00000434391.6	protein_coding	26432282,26432891,26438168,26442708,26446316,26447559,26457791,26460037,26468895	26432376,26433008,26438284,26442873,26446432,26447660,26457905,26460144,26471294	Gene ID= ENSG00000117682.16 TPM= 12.84 Transcript Type= nonsense_mediated_decay
chr1	26472515	26475970	26472515	26475970	+	ENST00000619352.4@HMGN2	ENST00000619352.4	protein_coding	26472515,26472608,26473483,26473703,26474085,26474572,26475113	26472562,26472627,26473527,26473732,26474135,26474667,26475970	Gene ID= ENSG00000198830.10 TPM= 11.68 Transcript Type= protein_coding
chr1	26472519	26475972	26472519	26475972	+	ENST00000361427.5@HMGN2	ENST00000361427.5	protein_coding	26472519,26473483,26473703,26474085,26474572,26475113	26472627,26473527,26473732,26474135,26474667,26475972	Gene ID= ENSG00000198830.10 TPM= 414.5 Transcript Type= protein_coding
chr1	26529767	26575025	26529767	26575025	+	ENST00000374168.6@RPS6KA1	ENST00000374168.6	protein_coding	26529767,26536925,26546867,26547189,26551397,26551644,26553391,26554214,26554596,26555151,26555537,26556654,26556998,26558807,26560726,26561045,26561505,26571449,26571849,26572176,26573224,26574079	26529983,26536969,26546983,26547270,26551477,26551723,26553497,26554251,26554738,26555221,26555625,26556718,26557100,26558937,26560851,26561134,26561663,26571610,26571925,26572293,26573361,26575025	Gene ID= ENSG00000117676.13 TPM= 260.62 Transcript Type= protein_coding
chr1	26543112	26575014	26543112	26575014	+	ENST00000530003.5@RPS6KA1	ENST00000530003.5	protein_coding	26543112,26546867,26547189,26551397,26551644,26553391,26554214,26554596,26555151,26555537,26556654,26556998,26558807,26560726,26561045,26561505,26571449,26571849,26572176,26573224,26574079	26543221,26546983,26547270,26551477,26551723,26553497,26554251,26554738,26555221,26555625,26556718,26557100,26558937,26560851,26561134,26561663,26571610,26571925,26572293,26573361,26575014	Gene ID= ENSG00000117676.13 TPM= 22.58 Transcript Type= protein_coding
chr1	26760896	26781180	26760896	26781180	+	transcript3003.chr1.nnic@ARID1A	transcript3003.chr1.nnic	protein_coding	26760896,26761384,26762150,26762973,26766223,26766455,26767790,26771117,26772498,26772812,26773346,26773580,26773802,26774329,26775577,26779023	26761096,26761473,26762319,26763292,26766366,26766566,26767999,26771326,26772632,26772987,26773496,26773717,26773898,26775220,26775707,26781180	Gene ID= ENSG00000117713.18 TPM= 44.37 Transcript Type= NA
chr1	26787933	26798398	26787933	26798398	+	transcript3009.chr1.nic@PIGV	transcript3009.chr1.nic	protein_coding	26787933,26790759,26794113,26797563	26787989,26790893,26795234,26798398	Gene ID= ENSG00000060642.10 TPM= 4.67 Transcript Type= NA
chr1	26788195	26798297	26788195	26798297	+	transcript3013.chr1.nic@PIGV	transcript3013.chr1.nic	protein_coding	26788195,26790759,26794113,26797563	26788394,26790893,26795234,26798297	Gene ID= ENSG00000060642.10 TPM= 2.34 Transcript Type= NA
chr1	26787995	26798398	26787995	26798398	+	ENST00000078527.8@PIGV	ENST00000078527.8	protein_coding	26787995,26790759,26794113,26797563	26788268,26790893,26795234,26798398	Gene ID= ENSG00000060642.10 TPM= 5.84 Transcript Type= protein_coding
chr1	26826688	26857602	26826688	26857602	+	transcript3019.chr1.nic@ZDHHC18	transcript3019.chr1.nic	protein_coding	26826688,26832447,26848608,26850301,26850558,26851129,26852753,26853726,26856185,26856848	26827139,26832607,26848757,26850438,26850606,26851231,26852865,26853825,26856262,26857602	Gene ID= ENSG00000204160.11 TPM= 5.84 Transcript Type= NA
chr1	26826710	26857601	26826710	26857601	+	ENST00000374142.8@ZDHHC18	ENST00000374142.8	protein_coding	26826710,26832447,26848608,26850301,26850558,26851129,26852753,26853726	26827139,26832607,26848757,26850438,26850606,26851231,26852865,26857601	Gene ID= ENSG00000204160.11 TPM= 9.34 Transcript Type= protein_coding
chr1	26863138	26864457	26863138	26864457	+	ENST00000339276.5@SFN	ENST00000339276.5	protein_coding	26863138	26864457	Gene ID= ENSG00000175793.11 TPM= 56.04 Transcript Type= protein_coding
chr1	26876133	26890297	26876133	26890297	-	ENST00000374135.8@GPN2	ENST00000374135.8	protein_coding	26889686,26888969,26885973,26884160,26876133	26890297,26889125,26886133,26884290,26879749	Gene ID= ENSG00000142751.14 TPM= 24.52 Transcript Type= protein_coding
chr1	26890489	26900466	26890489	26900466	-	ENST00000361720.9@GPATCH3	ENST00000361720.9	protein_coding	26899992,26897301,26894236,26893389,26892670,26892411,26890489	26900466,26897725,26894410,26893448,26892791,26892538,26891226	Gene ID= ENSG00000198746.12 TPM= 22.77 Transcript Type= protein_coding
chr1	26890489	26900470	26890489	26900470	-	transcript3052.chr1.nic@GPATCH3	transcript3052.chr1.nic	protein_coding	26899992,26897301,26894236,26892411,26890489	26900470,26897725,26894410,26893448,26891226	Gene ID= ENSG00000198746.12 TPM= 2.92 Transcript Type= NA
chr1	26921726	26946862	26921726	26946862	+	ENST00000321265.9@NUDC	ENST00000321265.9	protein_coding	26921726,26924089,26941457,26941753,26942660,26942871,26945390,26945568,26946130	26921929,26924166,26941660,26941818,26942776,26943065,26945473,26945686,26946862	Gene ID= ENSG00000090273.13 TPM= 234.69 Transcript Type= protein_coding
chr1	26926023	26929292	26926023	26929292	-	transcript3062.chr1.nnic@NA	transcript3062.chr1.nnic	NA	26926023	26929292	Gene ID= novel_gene_chr1_3063 TPM= 4.67 Transcript Type= NA
chr1	26949565	26960390	26949565	26960390	-	transcript3053.chr1.nnic@KDF1	transcript3053.chr1.nnic	protein_coding	26960350,26953846,26951342,26950682,26949565	26960390,26953947,26952412,26950756,26950151	Gene ID= ENSG00000175707.8 TPM= 9.34 Transcript Type= NA
chr1	26949562	26960406	26949562	26960406	-	ENST00000320567.5@KDF1	ENST00000320567.5	protein_coding	26960350,26951342,26950682,26949562	26960406,26952412,26950756,26950151	Gene ID= ENSG00000175707.8 TPM= 25.69 Transcript Type= protein_coding
chr1	26993692	27000898	26993692	27000898	+	transcript3066.chr1.nnic@TRNP1	transcript3066.chr1.nnic	protein_coding	26993692,26993894,26999847	26993854,26994612,27000898	Gene ID= ENSG00000253368.3 TPM= 2.34 Transcript Type= NA
chr1	26993707	27000898	26993707	27000898	+	ENST00000522111.2@TRNP1	ENST00000522111.2	protein_coding	26993707,26999847	26994612,27000898	Gene ID= ENSG00000253368.3 TPM= 4.67 Transcript Type= protein_coding
chr1	27005020	27012836	27005020	27012836	-	ENST00000289166.5@FAM46B	ENST00000289166.5	protein_coding	27012407,27005020	27012836,27006957	Gene ID= ENSG00000158246.7 TPM= 113.26 Transcript Type= protein_coding
chr1	27098815	27154910	27098815	27154910	-	ENST00000263980.7@SLC9A1	ENST00000263980.7	protein_coding	27153983,27113826,27109527,27107648,27105885,27103223,27102673,27102385,27102016,27101725,27101203,27098815	27154910,27114286,27109777,27107865,27106087,27103312,27102743,27102558,27102130,27101826,27101275,27100644	Gene ID= ENSG00000090020.10 TPM= 81.73 Transcript Type= protein_coding
chr1	27234516	27308633	27234516	27308633	+	ENST00000319394.7@WDTC1	ENST00000319394.7	protein_coding	27234516,27260956,27263152,27282239,27283338,27287674,27292215,27294022,27294514,27296326,27297048,27297938,27301226,27303621,27305001,27306186	27234951,27261102,27263235,27282285,27283449,27287861,27292397,27294116,27294629,27296401,27297156,27298111,27301461,27303795,27305193,27308633	Gene ID= ENSG00000142784.15 TPM= 5.25 Transcript Type= protein_coding
chr1	27234668	27308244	27234668	27308244	+	ENST00000361771.7@WDTC1	ENST00000361771.7	protein_coding	27234668,27260956,27263152,27282239,27283338,27287674,27292215,27294022,27294514,27296326,27297051,27297938,27301226,27303621,27305001,27306186	27234951,27261102,27263235,27282285,27283449,27287861,27292397,27294116,27294629,27296401,27297156,27298111,27301461,27303795,27305193,27308244	Gene ID= ENSG00000142784.15 TPM= 32.11 Transcript Type= protein_coding
chr1	27322160	27336400	27322160	27336400	+	ENST00000374076.8@TMEM222	ENST00000374076.8	protein_coding	27322160,27330720,27332070,27333958,27334151,27335379	27322391,27330804,27332101,27334054,27334281,27336400	Gene ID= ENSG00000186501.14 TPM= 47.87 Transcript Type= protein_coding
chr1	27322247	27336400	27322247	27336400	+	ENST00000464720.5@TMEM222	ENST00000464720.5	protein_coding	27322247,27330720,27330985,27332070,27333958,27334151,27335379	27322391,27330804,27331137,27332101,27334054,27334281,27336400	Gene ID= ENSG00000186501.14 TPM= 12.84 Transcript Type= nonsense_mediated_decay
chr1	27343075	27353932	27343075	27353932	+	transcript3121.chr1.nic@SYTL1	transcript3121.chr1.nic	protein_coding	27343075,27345297,27347421,27347808,27347967,27349080,27349398,27349652,27349972,27350389,27350794,27351258,27351456,27353283,27353713	27343272,27345525,27347569,27347880,27348012,27349152,27349498,27349765,27350132,27350485,27350952,27351336,27351555,27353488,27353932	Gene ID= ENSG00000142765.17 TPM= 4.65 Transcript Type= NA
chr1	27342006	27353932	27342006	27353932	+	transcript3123.chr1.nic@SYTL1	transcript3123.chr1.nic	protein_coding	27342006,27345297,27347421,27347808,27347967,27349080,27349398,27349652,27349972,27350794,27351258,27351456,27353283,27353713	27342150,27345525,27347569,27347880,27348012,27349152,27349498,27349765,27350485,27350952,27351336,27351555,27353488,27353932	Gene ID= ENSG00000142765.17 TPM= 5.42 Transcript Type= NA
chr1	27342006	27353932	27342006	27353932	+	transcript3125.chr1.nic@SYTL1	transcript3125.chr1.nic	protein_coding	27342006,27345297,27347421,27347808,27347967,27349080,27349398,27349972,27350389,27350794,27351258,27351456,27353283,27353713	27342150,27345525,27347569,27347880,27348012,27349152,27349765,27350132,27350485,27350952,27351336,27351555,27353488,27353932	Gene ID= ENSG00000142765.17 TPM= 6.4 Transcript Type= NA
chr1	27342006	27353932	27342006	27353932	+	transcript3127.chr1.nnic@SYTL1	transcript3127.chr1.nnic	protein_coding	27342006,27345297,27347421,27347808,27347967,27349080,27349398,27349972,27350389,27350794,27351258,27351456,27353283,27353713	27342150,27345525,27347569,27347880,27348012,27349152,27349765,27350296,27350485,27350952,27351336,27351555,27353488,27353932	Gene ID= ENSG00000142765.17 TPM= 2.5 Transcript Type= NA
chr1	27342006	27353932	27342006	27353932	+	transcript3131.chr1.nic@SYTL1	transcript3131.chr1.nic	protein_coding	27342006,27345297,27347421,27347808,27347967,27349080,27349398,27349972,27350794,27351258,27351456,27353283,27353713	27342150,27345525,27347569,27347880,27348012,27349152,27349765,27350485,27350952,27351336,27351555,27353488,27353932	Gene ID= ENSG00000142765.17 TPM= 4.83 Transcript Type= NA
chr1	27342006	27353932	27342006	27353932	+	transcript3132.chr1.nic@SYTL1	transcript3132.chr1.nic	protein_coding	27342006,27345297,27347421,27347808,27347967,27349080,27349398,27349652,27349972,27351456,27353283,27353713	27342150,27345525,27347569,27347880,27348012,27349152,27349498,27349765,27351336,27351555,27353488,27353932	Gene ID= ENSG00000142765.17 TPM= 6.42 Transcript Type= NA
chr1	27342006	27353932	27342006	27353932	+	transcript3139.chr1.nic@SYTL1	transcript3139.chr1.nic	protein_coding	27342006,27345297,27347421,27347808,27347967,27349080,27349398,27351258,27351456,27353283,27353713	27342150,27345525,27347569,27347880,27348012,27349152,27350952,27351336,27351555,27353488,27353932	Gene ID= ENSG00000142765.17 TPM= 2.5 Transcript Type= NA
chr1	27342041	27353893	27342041	27353893	+	ENST00000616558.4@SYTL1	ENST00000616558.4	protein_coding	27342041,27345297,27347421,27347808,27347967,27349080,27349398,27349652,27349972,27350389,27350794,27351258,27351456,27353283,27353713	27342150,27345525,27347569,27347880,27348012,27349152,27349498,27349765,27350132,27350485,27350952,27351336,27351555,27353488,27353893	Gene ID= ENSG00000142765.17 TPM= 32.69 Transcript Type= protein_coding
chr1	27342022	27353932	27342022	27353932	+	ENST00000318074.9@SYTL1	ENST00000318074.9	protein_coding	27342022,27345297,27347421,27347808,27347967,27349116,27349398,27349652,27349972,27350389,27350794,27351258,27351456,27353283,27353713	27342150,27345525,27347569,27347880,27348012,27349152,27349498,27349765,27350132,27350485,27350952,27351336,27351555,27353488,27353932	Gene ID= ENSG00000142765.17 TPM= 4.65 Transcript Type= protein_coding
chr1	27351075	27353937	27351075	27353937	+	ENST00000615284.1@SYTL1	ENST00000615284.1	protein_coding	27351075,27351456,27353283,27353713	27351336,27351555,27353488,27353937	Gene ID= ENSG00000142765.17 TPM= 2.34 Transcript Type= retained_intron
chr1	27369112	27374824	27369112	27374824	-	ENST00000270879.8@FCN3	ENST00000270879.8	protein_coding	27374728,27374356,27373965,27373488,27373136,27370843,27370596,27369112	27374824,27374451,27374009,27373520,27373263,27370972,27370730,27369477	Gene ID= ENSG00000142748.12 TPM= 1402.12 Transcript Type= protein_coding
chr1	27369112	27374824	27369112	27374824	-	ENST00000354982.2@FCN3	ENST00000354982.2	protein_coding	27374728,27374356,27373965,27373136,27370843,27370596,27369112	27374824,27374451,27374009,27373263,27370972,27370730,27369477	Gene ID= ENSG00000142748.12 TPM= 195.7 Transcript Type= protein_coding
chr1	27379176	27383303	27379176	27383303	-	ENST00000374027.7@CD164L2	ENST00000374027.7	protein_coding	27383152,27382500,27382328,27381780,27379176	27383303,27382667,27382399,27381824,27380195	Gene ID= ENSG00000174950.10 TPM= 1.17 Transcript Type= protein_coding
chr1	27392644	27395814	27392644	27395814	+	ENST00000374024.3@GPR3	ENST00000374024.3	protein_coding	27392644,27393794	27392737,27395814	Gene ID= ENSG00000181773.6 TPM= 2.34 Transcript Type= protein_coding
chr1	27415985	27490170	27415985	27490170	-	transcript3210.chr1.nic@WASF2	transcript3210.chr1.nic	protein_coding	27489986,27428761,27418954,27418269,27415985	27490170,27428933,27419088,27418422,27416102	Gene ID= ENSG00000158195.10 TPM= 8.17 Transcript Type= NA
chr1	27404226	27490158	27404226	27490158	-	ENST00000618852.4@WASF2	ENST00000618852.4	protein_coding	27489986,27428761,27418954,27418269,27415985,27414833,27412572,27409692,27404226	27490158,27428933,27419088,27418422,27416102,27414963,27412727,27410206,27408346	Gene ID= ENSG00000158195.10 TPM= 148.28 Transcript Type= protein_coding
chr1	27407750	27409454	27407750	27409454	+	transcript3211.chr1.nnic@NA	transcript3211.chr1.nnic	NA	27407750	27409454	Gene ID= novel_gene_chr1_3212 TPM= 8.17 Transcript Type= NA
chr1	27612300	27635185	27612300	27635185	-	transcript3216.chr1.nnic@FGR	transcript3216.chr1.nnic	protein_coding	27635065,27627048,27625089,27623691,27623042,27621559,27617193,27616857,27615689,27615434,27614850,27614430,27613219,27612300	27635185,27627170,27625151,27623929,27623144,27621657,27617296,27617006,27615844,27615613,27614926,27614583,27613350,27613122	Gene ID= ENSG00000000938.12 TPM= 14.49 Transcript Type= NA
chr1	27612292	27626240	27612292	27626240	-	ENST00000399173.5@FGR	ENST00000399173.5	protein_coding	27626046,27625089,27623691,27623042,27621559,27617193,27616857,27615689,27615434,27614850,27614430,27613219,27612292	27626240,27625151,27623929,27623144,27621657,27617296,27617006,27615844,27615613,27614926,27614583,27613350,27613122	Gene ID= ENSG00000000938.12 TPM= 36.67 Transcript Type= protein_coding
chr1	27612300	27635584	27612300	27635584	-	transcript3229.chr1.nnic@FGR	transcript3229.chr1.nnic	protein_coding	27635445,27625089,27623691,27623042,27621559,27617193,27616857,27615689,27615434,27614850,27614430,27613219,27612300	27635584,27625151,27623929,27623144,27621657,27617296,27617006,27615844,27615613,27614926,27614583,27613350,27613122	Gene ID= ENSG00000000938.12 TPM= 13.32 Transcript Type= NA
chr1	27612064	27635277	27612064	27635277	-	ENST00000374005.7@FGR	ENST00000374005.7	protein_coding	27635065,27625089,27623691,27623042,27621559,27617193,27616857,27615689,27615434,27614850,27614430,27613219,27612064	27635277,27625151,27623929,27623144,27621657,27617296,27617006,27615844,27615613,27614926,27614583,27613350,27613122	Gene ID= ENSG00000000938.12 TPM= 5.84 Transcript Type= protein_coding
chr1	27612300	27626236	27612300	27626236	-	transcript3236.chr1.nic@FGR	transcript3236.chr1.nic	protein_coding	27626046,27625089,27623042,27621559,27617193,27616857,27615689,27615434,27614850,27614430,27613219,27612300	27626236,27625151,27623929,27621657,27617296,27617006,27615844,27615613,27614926,27614583,27613350,27613122	Gene ID= ENSG00000000938.12 TPM= 9.53 Transcript Type= NA
chr1	27612300	27635287	27612300	27635287	-	transcript3238.chr1.nic@FGR	transcript3238.chr1.nic	protein_coding	27635065,27625089,27623042,27621559,27617193,27616857,27615689,27615434,27614850,27614430,27613219,27612300	27635287,27625151,27623929,27621657,27617296,27617006,27615844,27615613,27614926,27614583,27613350,27613122	Gene ID= ENSG00000000938.12 TPM= 16.53 Transcript Type= NA
chr1	27626892	27630101	27626892	27630101	+	transcript3258.chr1.nnic@NA	transcript3258.chr1.nnic	NA	27626892	27630101	Gene ID= novel_gene_chr1_3259 TPM= 2.34 Transcript Type= NA
chr1	27632142	27635163	27632142	27635163	-	transcript3260.chr1.nnic@NA	transcript3260.chr1.nnic	NA	27632142	27635163	Gene ID= novel_gene_chr1_3261 TPM= 4.67 Transcript Type= NA
chr1	27666061	27672218	27666061	27672218	-	ENST00000361157.10@IFI6	ENST00000361157.10	protein_coding	27672123,27669245,27668458,27668226,27666061	27672218,27669346,27668535,27668375,27666475	Gene ID= ENSG00000126709.14 TPM= 345.81 Transcript Type= protein_coding
chr1	27666066	27672198	27666066	27672198	-	ENST00000362020.4@IFI6	ENST00000362020.4	protein_coding	27672123,27669233,27668458,27668226,27666066	27672198,27669346,27668535,27668375,27666475	Gene ID= ENSG00000126709.14 TPM= 69.09 Transcript Type= protein_coding
chr1	27666064	27672178	27666064	27672178	-	ENST00000339145.8@IFI6	ENST00000339145.8	protein_coding	27672123,27669221,27668458,27668226,27666064	27672178,27669346,27668535,27668375,27666475	Gene ID= ENSG00000126709.14 TPM= 11.29 Transcript Type= protein_coding
chr1	27670455	27672188	27670455	27672188	-	transcript3271.chr1.nnic@NA	transcript3271.chr1.nnic	NA	27670455	27672188	Gene ID= novel_gene_chr1_3272 TPM= 4.67 Transcript Type= NA
chr1	27725979	27763122	27725979	27763122	+	ENST00000373954.10@FAM76A	ENST00000373954.10	protein_coding	27725979,27727472,27732603,27734031,27744654,27749068,27755195,27759526,27760495	27726161,27727536,27732657,27734183,27744811,27749154,27755330,27759627,27763122	Gene ID= ENSG00000009780.15 TPM= 16.35 Transcript Type= protein_coding
chr1	27773183	27824452	27773183	27824452	+	ENST00000373943.8@STX12	ENST00000373943.8	protein_coding	27773183,27789562,27793533,27801678,27810246,27812163,27817851,27819650,27822231	27773425,27789631,27793632,27801815,27810289,27812268,27817923,27819732,27824452	Gene ID= ENSG00000117758.13 TPM= 63.05 Transcript Type= protein_coding
chr1	27872524	27886673	27872524	27886673	+	transcript3304.chr1.nic@THEMIS2	transcript3304.chr1.nic	protein_coding	27872524,27876588,27879644,27881971,27882513,27885295,27885867	27872665,27876728,27880054,27882077,27883043,27885451,27886673	Gene ID= ENSG00000130775.15 TPM= 7.01 Transcript Type= NA
chr1	27872524	27886673	27872524	27886673	+	transcript3317.chr1.nic@THEMIS2	transcript3317.chr1.nic	protein_coding	27872524,27876588,27881971,27885295,27885867	27872665,27876728,27883043,27885451,27886673	Gene ID= ENSG00000130775.15 TPM= 7.01 Transcript Type= NA
chr1	27872545	27886673	27872545	27886673	+	transcript3324.chr1.nnic@THEMIS2	transcript3324.chr1.nnic	protein_coding	27872545,27885295,27885867	27872665,27885451,27886673	Gene ID= ENSG00000130775.15 TPM= 7.01 Transcript Type= NA
chr1	27872568	27886673	27872568	27886673	+	ENST00000373921.7@THEMIS2	ENST00000373921.7	protein_coding	27872568,27876588,27879644,27881971,27885295,27885867	27872665,27876728,27880054,27883043,27885451,27886673	Gene ID= ENSG00000130775.15 TPM= 182.14 Transcript Type= protein_coding
chr1	27872543	27886685	27872543	27886685	+	ENST00000328928.11@THEMIS2	ENST00000328928.11	protein_coding	27872543,27876588,27879644,27881971,27882513,27885295,27885867	27872665,27876728,27880054,27882125,27883043,27885451,27886685	Gene ID= ENSG00000130775.15 TPM= 3.5 Transcript Type= protein_coding
chr1	27872544	27886685	27872544	27886685	+	ENST00000373925.5@THEMIS2	ENST00000373925.5	protein_coding	27872544,27876588,27879644,27885295,27885867	27872665,27876728,27880054,27885451,27886685	Gene ID= ENSG00000130775.15 TPM= 7.01 Transcript Type= protein_coding
chr1	27874713	27875956	27874713	27875956	-	transcript3329.chr1.nnic@NA	transcript3329.chr1.nnic	NA	27874713	27875956	Gene ID= novel_gene_chr1_3330 TPM= 3.5 Transcript Type= NA
chr1	27891524	27914743	27891524	27914743	-	ENST00000373912.7@RPA2	ENST00000373912.7	protein_coding	27914434,27914063,27907181,27906928,27897633,27897005,27894290,27894012,27891524	27914743,27914169,27907282,27907041,27897707,27897121,27894397,27894106,27892247	Gene ID= ENSG00000117748.9 TPM= 75.89 Transcript Type= protein_coding
chr1	27934993	27959157	27934993	27959157	+	ENST00000373894.7@SMPDL3B	ENST00000373894.7	protein_coding	27934993,27945232,27949065,27953215,27954354,27955684,27955949,27958476	27935244,27945445,27949162,27953358,27954526,27955864,27956082,27959157	Gene ID= ENSG00000130768.14 TPM= 44.37 Transcript Type= protein_coding
chr1	27959557	27968093	27959557	27968093	+	transcript3347.chr1.nnic@XKR8	transcript3347.chr1.nnic	protein_coding	27959557,27963497,27965351,27965719,27966503	27960362,27963693,27965458,27965881,27968093	Gene ID= ENSG00000158156.7 TPM= 2.72 Transcript Type= NA
chr1	27959958	27968093	27959958	27968093	+	transcript3349.chr1.nic@XKR8	transcript3349.chr1.nic	protein_coding	27959958,27963497,27964185,27966503	27960362,27963693,27964235,27968093	Gene ID= ENSG00000158156.7 TPM= 8.56 Transcript Type= NA
chr1	27959462	27968096	27959462	27968096	+	ENST00000373884.5@XKR8	ENST00000373884.5	protein_coding	27959462,27963497,27966503	27960362,27963693,27968096	Gene ID= ENSG00000158156.7 TPM= 28.41 Transcript Type= protein_coding
chr1	27970344	28088696	27970344	28088696	-	ENST00000373871.7@EYA3	ENST00000373871.7	protein_coding	28088524,28057994,28048383,28042571,28038839,28035544,28027789,28017154,28013111,28010947,28004336,27999960,27997320,27993400,27989697,27988535,27978374,27970344	28088696,28058094,28048426,28042650,28038905,28035680,28027926,28017239,28013294,28011086,28004419,28000049,27997378,27993560,27989811,27988656,27978474,27974546	Gene ID= ENSG00000158161.15 TPM= 4.67 Transcript Type= protein_coding
chr1	27970344	28088643	27970344	28088643	-	transcript3334.chr1.nnic@EYA3	transcript3334.chr1.nnic	protein_coding	28088524,28080332,28057994,28048383,28042571,28038839,28035544,28017154,28013111,28010947,28004336,27999960,27997320,27993400,27989697,27988535,27978374,27970344	28088643,28080451,28058094,28048426,28042650,28038905,28035680,28017239,28013294,28011086,28004419,28000049,27997378,27993560,27989811,27988656,27978474,27974546	Gene ID= ENSG00000158161.15 TPM= 5.84 Transcript Type= NA
chr1	27970347	28088637	27970347	28088637	-	ENST00000540618.5@EYA3	ENST00000540618.5	protein_coding	28088524,28057994,28048383,28042571,28038839,28035544,28017154,28013111,28010947,28004336,27999960,27997320,27993400,27989697,27988535,27978374,27970347	28088637,28058094,28048426,28042650,28038905,28035680,28017239,28013294,28011086,28004419,28000049,27997378,27993560,27989811,27988656,27978474,27974546	Gene ID= ENSG00000158161.15 TPM= 4.67 Transcript Type= protein_coding
chr1	28149326	28176678	28149326	28176678	-	transcript3365.chr1.nnic@PTAFR	transcript3365.chr1.nnic	protein_coding	28176592,28172457,28149326	28176678,28172527,28151059	Gene ID= ENSG00000169403.11 TPM= 11.68 Transcript Type= NA
chr1	28147166	28177188	28147166	28177188	-	ENST00000373857.7@PTAFR	ENST00000373857.7	protein_coding	28176592,28147166	28177188,28151059	Gene ID= ENSG00000169403.11 TPM= 79.4 Transcript Type= protein_coding
chr1	28200559	28233025	28200559	28233025	-	ENST00000489277.5@DNAJC8	ENST00000489277.5	protein_coding	28232921,28230131,28228922,28214940,28210571,28209972,28208342,28205258,28203747,28200559	28233025,28230252,28229023,28214996,28210637,28210066,28208413,28205349,28203822,28201370	Gene ID= ENSG00000126698.10 TPM= 3.5 Transcript Type= processed_transcript
chr1	28200278	28233025	28200278	28233025	-	ENST00000263697.5@DNAJC8	ENST00000263697.5	protein_coding	28232921,28228922,28214940,28210571,28209972,28208342,28205258,28203747,28200278	28233025,28229023,28214996,28210637,28210066,28208413,28205349,28203822,28201370	Gene ID= ENSG00000126698.10 TPM= 10.51 Transcript Type= protein_coding
chr1	28236133	28238100	28236133	28238100	+	ENST00000335514.9@ATPIF1	ENST00000335514.9	protein_coding	28236133,28236361,28237837	28236270,28236452,28238100	Gene ID= ENSG00000130770.17 TPM= 39.7 Transcript Type= protein_coding
chr1	28236154	28238098	28236154	28238098	+	ENST00000465645.1@ATPIF1	ENST00000465645.1	protein_coding	28236154,28236361	28236270,28238098	Gene ID= ENSG00000130770.17 TPM= 11.68 Transcript Type= protein_coding
chr1	28236109	28238105	28236109	28238105	+	ENST00000497986.5@ATPIF1	ENST00000497986.5	protein_coding	28236109,28236361,28237761	28236270,28236452,28238105	Gene ID= ENSG00000130770.17 TPM= 1.17 Transcript Type= protein_coding
chr1	28259490	28282491	28259490	28282491	+	transcript3377.chr1.nnic@SESN2	transcript3377.chr1.nnic	protein_coding	28259490,28269183,28272284,28272581,28273358,28274040,28274825,28279097,28280716	28259937,28269248,28272466,28272793,28273508,28274158,28275015,28279241,28282491	Gene ID= ENSG00000130766.4 TPM= 2.34 Transcript Type= NA
chr1	28259527	28282491	28259527	28282491	+	ENST00000253063.3@SESN2	ENST00000253063.3	protein_coding	28259527,28269183,28271674,28272284,28272581,28273358,28274040,28274825,28279097,28280716	28259937,28269248,28271871,28272466,28272793,28273508,28274158,28275015,28279241,28282491	Gene ID= ENSG00000130766.4 TPM= 39.7 Transcript Type= protein_coding
chr1	28329010	28335962	28329010	28335962	+	transcript3378.chr1.nnic@MED18	transcript3378.chr1.nnic	protein_coding	28329010,28330597,28334417,28335709	28329180,28330735,28334919,28335962	Gene ID= ENSG00000130772.13 TPM= 4.67 Transcript Type= NA
chr1	28329010	28335967	28329010	28335967	+	transcript3380.chr1.nnic@MED18	transcript3380.chr1.nnic	protein_coding	28329010,28330597,28334417,28335709	28329180,28330735,28335160,28335967	Gene ID= ENSG00000130772.13 TPM= 5.84 Transcript Type= NA
chr1	28329038	28335967	28329038	28335967	+	ENST00000373842.8@MED18	ENST00000373842.8	protein_coding	28329038,28330597,28334417	28329180,28330735,28335967	Gene ID= ENSG00000130772.13 TPM= 9.34 Transcript Type= protein_coding
chr1	28369603	28500369	28369603	28500369	+	ENST00000373839.7@PHACTR4	ENST00000373839.7	protein_coding	28369603,28407410,28459085,28460212,28465685,28466382,28473554,28476107,28480451,28489170,28490951,28491650,28493015,28496534	28369825,28407463,28459258,28460292,28465849,28466768,28474151,28476291,28480604,28489225,28491012,28491787,28493091,28500369	Gene ID= ENSG00000204138.12 TPM= 8.17 Transcript Type= protein_coding
chr1	28506043	28538983	28506043	28538983	+	transcript3409.chr1.nnic@RCC1	transcript3409.chr1.nnic	protein_coding	28506043,28508128,28508830,28516725,28517974,28529858,28531803,28532171,28535050,28535258,28535871,28536262,28536747,28537832	28506084,28508160,28508905,28516867,28518308,28529939,28531990,28532350,28535146,28535380,28536026,28536381,28536899,28538983	Gene ID= ENSG00000180198.15 TPM= 10.51 Transcript Type= NA
chr1	28505981	28538983	28505981	28538983	+	transcript3410.chr1.nic@RCC1	transcript3410.chr1.nic	protein_coding	28505981,28508128,28508830,28516725,28529858,28530523,28531803,28532171,28535050,28535258,28535871,28536262,28536747,28537832	28506084,28508160,28508905,28516867,28529939,28530573,28531990,28532350,28535146,28535380,28536026,28536381,28536899,28538983	Gene ID= ENSG00000180198.15 TPM= 5.84 Transcript Type= NA
chr1	28505943	28539196	28505943	28539196	+	ENST00000398958.6@RCC1	ENST00000398958.6	protein_coding	28505943,28508128,28508830,28529858,28531803,28532171,28535050,28535258,28535871,28536262,28536747,28537832	28506084,28508160,28508905,28529939,28531990,28532350,28535146,28535380,28536026,28536381,28536899,28539196	Gene ID= ENSG00000180198.15 TPM= 5.84 Transcript Type= protein_coding
chr1	28506043	28509634	28506043	28509634	+	transcript3417.chr1.nnic@SNHG3	transcript3417.chr1.nnic	sense_intronic	28506043,28508128,28508830,28509337	28506084,28508160,28508905,28509634	Gene ID= ENSG00000242125.3 TPM= 3.5 Transcript Type= NA
chr1	28505980	28510892	28505980	28510892	+	ENST00000413987.1@SNHG3	ENST00000413987.1	sense_intronic	28505980,28508128,28508830	28506084,28508160,28510892	Gene ID= ENSG00000242125.3 TPM= 22.18 Transcript Type= retained_intron
chr1	28576158	28578725	28576158	28578725	-	transcript3439.chr1.nnic@NA	transcript3439.chr1.nnic	NA	28576158	28578725	Gene ID= novel_gene_chr1_3440 TPM= 2.34 Transcript Type= NA
chr1	28578538	28582806	28578538	28582806	-	transcript3428.chr1.nic@SNHG12	transcript3428.chr1.nic	antisense_RNA	28581590,28581111,28580560,28579942,28579533,28578538	28582806,28581229,28580646,28579981,28579587,28578680	Gene ID= ENSG00000197989.13 TPM= 3.5 Transcript Type= NA
chr1	28578538	28581873	28578538	28581873	-	transcript3431.chr1.nic@SNHG12	transcript3431.chr1.nic	antisense_RNA	28581590,28581111,28579912,28579533,28578538	28581873,28581229,28580646,28579587,28578680	Gene ID= ENSG00000197989.13 TPM= 4.09 Transcript Type= NA
chr1	28578538	28581873	28578538	28581873	-	transcript3433.chr1.nic@SNHG12	transcript3433.chr1.nic	antisense_RNA	28581590,28581111,28580560,28579533,28578538	28581873,28581229,28580646,28579981,28578680	Gene ID= ENSG00000197989.13 TPM= 8.56 Transcript Type= NA
chr1	28578538	28581874	28578538	28581874	-	transcript3436.chr1.nic@SNHG12	transcript3436.chr1.nic	antisense_RNA	28581590,28579533,28578538	28581874,28581229,28578680	Gene ID= ENSG00000197989.13 TPM= 10.31 Transcript Type= NA
chr1	28578538	28581872	28578538	28581872	-	ENST00000470977.5@SNHG12	ENST00000470977.5	antisense_RNA	28581590,28581094,28580560,28579533,28578538	28581872,28581229,28580646,28579981,28578680	Gene ID= ENSG00000197989.13 TPM= 8.56 Transcript Type= retained_intron
chr1	28578538	28581834	28578538	28581834	-	ENST00000531126.5@SNHG12	ENST00000531126.5	antisense_RNA	28581590,28581111,28580560,28579912,28579533,28578538	28581834,28581229,28580646,28579981,28579587,28578680	Gene ID= ENSG00000197989.13 TPM= 7.01 Transcript Type= antisense_RNA
chr1	28668780	28714873	28668780	28714873	+	ENST00000294409.2@GMEB1	ENST00000294409.2	protein_coding	28668780,28683583,28690074,28691585,28692942,28696927,28702438,28704192,28710520,28714073	28668839,28683740,28690186,28691709,28693045,28697084,28702569,28704329,28710642,28714873	Gene ID= ENSG00000162419.12 TPM= 1.17 Transcript Type= protein_coding
chr1	28668778	28714886	28668778	28714886	+	ENST00000361872.8@GMEB1	ENST00000361872.8	protein_coding	28668778,28683586,28690104,28691585,28692942,28696927,28702438,28704192,28710520,28714073	28668839,28683740,28690186,28691709,28693045,28697084,28702569,28704329,28710642,28714886	Gene ID= ENSG00000162419.12 TPM= 1.17 Transcript Type= protein_coding
chr1	28736863	28769125	28736863	28769125	+	transcript3463.chr1.nnic@YTHDF2	transcript3463.chr1.nnic	protein_coding	28736863,28737658,28738259,28740303,28742403,28768929	28737147,28737682,28738338,28740398,28743986,28769125	Gene ID= ENSG00000198492.15 TPM= 2.34 Transcript Type= NA
chr1	28736759	28769775	28736759	28769775	+	ENST00000373812.7@YTHDF2	ENST00000373812.7	protein_coding	28736759,28737658,28738259,28742403,28768929	28737147,28737682,28738338,28743986,28769775	Gene ID= ENSG00000198492.15 TPM= 98.08 Transcript Type= protein_coding
chr1	28736936	28769775	28736936	28769775	+	transcript3468.chr1.nnic@YTHDF2	transcript3468.chr1.nnic	protein_coding	28736936,28737658,28738259,28768929	28737147,28737682,28738338,28769775	Gene ID= ENSG00000198492.15 TPM= 5.84 Transcript Type= NA
chr1	28736950	28769125	28736950	28769125	+	ENST00000478283.5@YTHDF2	ENST00000478283.5	protein_coding	28736950,28738259,28742403,28768929	28737682,28738338,28743986,28769125	Gene ID= ENSG00000198492.15 TPM= 5.84 Transcript Type= processed_transcript
chr1	28739313	28743060	28739313	28743060	-	transcript3471.chr1.nnic@NA	transcript3471.chr1.nnic	NA	28739313	28743060	Gene ID= novel_gene_chr1_3472 TPM= 2.34 Transcript Type= NA
chr1	28887091	29120046	28887091	29120046	+	ENST00000343067.8@EPB41	ENST00000343067.8	protein_coding	28887091,28987431,28993330,28997215,29011865,29015692,29018224,29030400,29033093,29035826,29039254,29053104,29058589,29058811,29060422,29064982,29097807,29109336,29112368,29115699,29116819	28887210,28987905,28993542,28997319,29011907,29015767,29018442,29030487,29033245,29035923,29039426,29053312,29058645,29058852,29060484,29065158,29097935,29109437,29112448,29115803,29120046	Gene ID= ENSG00000159023.19 TPM= 4.09 Transcript Type= protein_coding
chr1	28887091	29120046	28887091	29120046	+	ENST00000356093.6@EPB41	ENST00000356093.6	protein_coding	28887091,28987431,28993330,28997215,29011865,29015692,29018224,29030400,29033093,29035826,29039254,29053104,29060422,29064982,29097807,29109336,29112368,29115699,29116819	28887210,28987905,28993542,28997319,29011907,29015767,29018442,29030487,29033245,29035923,29039426,29053312,29060484,29065158,29097935,29109437,29112448,29115803,29120046	Gene ID= ENSG00000159023.19 TPM= 5.25 Transcript Type= protein_coding
chr1	29119428	29123935	29119428	29123935	-	ENST00000521452.1@TMEM200B	ENST00000521452.1	protein_coding	29123856,29119428	29123935,29121848	Gene ID= ENSG00000253304.1 TPM= 29.19 Transcript Type= protein_coding
chr1	29147743	29181987	29147743	29181987	-	ENST00000373795.6@SRSF4	ENST00000373795.6	protein_coding	29181646,29160375,29159374,29154696,29150103,29147743	29181987,29160517,29159486,29154910,29150192,29149226	Gene ID= ENSG00000116350.16 TPM= 246.36 Transcript Type= protein_coding
chr1	29178355	29181920	29178355	29181920	-	transcript3501.chr1.nnic@NA	transcript3501.chr1.nnic	NA	29178355	29181920	Gene ID= novel_gene_chr1_3502 TPM= 10.51 Transcript Type= NA
chr1	29193817	29230938	29193817	29230938	-	transcript3505.chr1.nic@MECR	transcript3505.chr1.nic	protein_coding	29230731,29220838,29216588,29216005,29206762,29203131,29201943,29200516,29196198,29195941,29193817	29230938,29220921,29216685,29216136,29206905,29203233,29202045,29200589,29196258,29196013,29194179	Gene ID= ENSG00000116353.15 TPM= 3.5 Transcript Type= NA
chr1	29192873	29230924	29192873	29230924	-	ENST00000373791.7@MECR	ENST00000373791.7	protein_coding	29230731,29216588,29216005,29206762,29203131,29201943,29200516,29196198,29195941,29192873	29230924,29216812,29216136,29206905,29203233,29202045,29200589,29196258,29196013,29194179	Gene ID= ENSG00000116353.15 TPM= 2.34 Transcript Type= protein_coding
chr1	29193817	29230932	29193817	29230932	-	ENST00000263702.10@MECR	ENST00000263702.10	protein_coding	29230731,29216588,29216005,29206762,29203131,29201943,29200516,29196198,29195941,29193817	29230932,29216685,29216136,29206905,29203233,29202045,29200589,29196258,29196013,29194179	Gene ID= ENSG00000116353.15 TPM= 19.85 Transcript Type= protein_coding
chr1	29237575	29326800	29237575	29326800	+	transcript3516.chr1.nnic@PTPRU	transcript3516.chr1.nnic	protein_coding	29237575,29255275,29258505,29259261,29259449,29259870,29260610,29275448,29279012,29279456,29280039,29282676,29283940,29284731,29291869,29303855,29304774,29305352,29310744,29311456,29311643,29312552,29315372,29316002,29317748,29320685,29323371,29323631,29325191,29325599	29238061,29255406,29258776,29259342,29259564,29260044,29260903,29275756,29279121,29279657,29280141,29282949,29283976,29284869,29292026,29304045,29304849,29305428,29310780,29311544,29311759,29312706,29315507,29316151,29317921,29320825,29323496,29323788,29325326,29326800	Gene ID= ENSG00000060656.19 TPM= 15.18 Transcript Type= NA
chr1	29236516	29326800	29236516	29326800	+	ENST00000373779.7@PTPRU	ENST00000373779.7	protein_coding	29236516,29255275,29258505,29259261,29259449,29259870,29260610,29275448,29279012,29279456,29280039,29282676,29283940,29284731,29291869,29303855,29304774,29305352,29310744,29311456,29311643,29312552,29315372,29316002,29317748,29320685,29323371,29323631,29325191,29325599	29236717,29255406,29258776,29259342,29259564,29260044,29260903,29275756,29279121,29279657,29280141,29282949,29283976,29284869,29292026,29304045,29304849,29305428,29310780,29311553,29311759,29312706,29315507,29316151,29317921,29320825,29323496,29323788,29325326,29326800	Gene ID= ENSG00000060656.19 TPM= 44.37 Transcript Type= protein_coding
chr1	29236549	29326813	29236549	29326813	+	ENST00000428026.6@PTPRU	ENST00000428026.6	protein_coding	29236549,29255275,29258505,29259261,29259449,29259870,29260610,29275448,29279012,29279456,29280039,29282676,29283940,29284731,29291869,29303855,29304774,29305352,29310744,29311456,29311643,29312552,29315372,29316002,29317748,29320685,29323371,29323631,29325191,29325599	29236717,29255406,29258776,29259342,29259564,29260044,29260903,29275756,29279121,29279657,29280141,29282949,29283976,29284869,29292026,29304045,29304849,29305428,29310780,29311544,29311759,29312706,29315507,29316151,29317921,29320825,29323496,29323788,29325326,29326813	Gene ID= ENSG00000060656.19 TPM= 36.2 Transcript Type= protein_coding
chr1	30723858	30725060	30723858	30725060	+	transcript3541.chr1.nnic@NA	transcript3541.chr1.nnic	NA	30723858	30725060	Gene ID= novel_gene_chr1_3542 TPM= 2.34 Transcript Type= NA
chr1	30732469	30757820	30732469	30757820	-	ENST00000294507.3@LAPTM5	ENST00000294507.3	protein_coding	30757659,30742456,30741640,30739809,30738940,30737604,30735173,30732469	30757820,30742549,30741716,30739937,30739062,30737699,30735265,30733917	Gene ID= ENSG00000162511.7 TPM= 798.63 Transcript Type= protein_coding
chr1	30932826	31065725	30932826	31065725	-	transcript3556.chr1.nic@PUM1	transcript3556.chr1.nic	protein_coding	31065616,31059204,31028796,31006994,31005853,30995054,30992390,30981312,30980062,30974651,30968354,30967167,30965982,30964674,30953714,30952234,30950127,30945346,30941998,30941151,30936643,30932826	31065725,31059577,31028864,31007102,31006031,30995220,30992660,30981405,30980163,30974802,30968492,30967310,30966197,30964910,30953981,30952363,30950261,30945483,30942123,30941272,30936835,30933342	Gene ID= ENSG00000134644.15 TPM= 7.01 Transcript Type= NA
chr1	30932826	31065725	30932826	31065725	-	transcript3565.chr1.nic@PUM1	transcript3565.chr1.nic	protein_coding	31065616,31059204,31028796,31006994,31005853,30995054,30992390,30981312,30980062,30974651,30968354,30967167,30965982,30964674,30953714,30952234,30950133,30945346,30941998,30941151,30936643,30932826	31065725,31059577,31028864,31007102,31006031,30995220,30992660,30981405,30980166,30974802,30968492,30967310,30966278,30964910,30953981,30952363,30950261,30945483,30942123,30941272,30936835,30933342	Gene ID= ENSG00000134644.15 TPM= 18.33 Transcript Type= NA
chr1	30932826	31065725	30932826	31065725	-	transcript3572.chr1.nic@PUM1	transcript3572.chr1.nic	protein_coding	31065616,31059204,31028796,31006994,31005853,30995054,30992390,30981312,30980062,30974651,30968354,30967167,30965982,30953714,30952234,30950127,30945346,30941998,30941151,30936643,30932826	31065725,31059577,31028864,31007102,31006031,30995220,30992660,30981405,30980166,30974802,30968492,30967310,30966278,30953981,30952363,30950261,30945483,30942123,30941272,30936835,30933342	Gene ID= ENSG00000134644.15 TPM= 7.24 Transcript Type= NA
chr1	30931506	31065698	30931506	31065698	-	ENST00000257075.9@PUM1	ENST00000257075.9	protein_coding	31065616,31059204,31028796,31006994,31005853,30995054,30992390,30981312,30980062,30974651,30968354,30967167,30965982,30964674,30953714,30952234,30950133,30945346,30941998,30941151,30936643,30931506	31065698,31059577,31028864,31007102,31006031,30995220,30992660,30981405,30980163,30974802,30968492,30967310,30966278,30964910,30953981,30952363,30950261,30945483,30942123,30941272,30936835,30933342	Gene ID= ENSG00000134644.15 TPM= 10.12 Transcript Type= protein_coding
chr1	30931506	31065704	30931506	31065704	-	ENST00000373747.7@PUM1	ENST00000373747.7	protein_coding	31065616,31059204,31028796,31006994,31005853,30995054,30992390,30981312,30980062,30974651,30968354,30967167,30965982,30964674,30953714,30952234,30950127,30945346,30941998,30941151,30936643,30931506	31065704,31059577,31028864,31007102,31006031,30995220,30992660,30981405,30980166,30974802,30968492,30967310,30966278,30964910,30953981,30952363,30950261,30945483,30942123,30941272,30936835,30933342	Gene ID= ENSG00000134644.15 TPM= 9.77 Transcript Type= protein_coding
chr1	30931506	31065695	30931506	31065695	-	ENST00000424085.6@PUM1	ENST00000424085.6	protein_coding	31065616,31059204,31028796,30981312,30980062,30974651,30968354,30967167,30965982,30964674,30953714,30952234,30950133,30945346,30941998,30941151,30936643,30931506	31065695,31059577,31028864,30981405,30980163,30974802,30968492,30967310,30966278,30964910,30953981,30952363,30950261,30945483,30942123,30941272,30936835,30933342	Gene ID= ENSG00000134644.15 TPM= 4.29 Transcript Type= protein_coding
chr1	30932844	31065684	30932844	31065684	-	ENST00000440538.6@PUM1	ENST00000440538.6	protein_coding	31065616,31059204,31028796,31006994,31005853,30995054,30992390,30981312,30980062,30974651,30968354,30967167,30965982,30964674,30953714,30952234,30950127,30945346,30941998,30941151,30936643,30932844	31065684,31059577,31028864,31007102,31006031,30995220,30992660,30981405,30980166,30974802,30968492,30967310,30966197,30964910,30953981,30952363,30950261,30945483,30942123,30941272,30936835,30933342	Gene ID= ENSG00000134644.15 TPM= 19.85 Transcript Type= protein_coding
chr1	30932826	31065695	30932826	31065695	-	ENST00000426105.6@PUM1	ENST00000426105.6	protein_coding	31065616,31059204,31028796,31006994,31005853,30995054,30992390,30981312,30980062,30974651,30968354,30967167,30965982,30964674,30953714,30952234,30950127,30945346,30941998,30941151,30936643,30932826	31065695,31059577,31028864,31007102,31006031,30995220,30992660,30981405,30980163,30974802,30968492,30967310,30966278,30964910,30953981,30952363,30950261,30945483,30942123,30941272,30936835,30933342	Gene ID= ENSG00000134644.15 TPM= 71.22 Transcript Type= protein_coding
chr1	31259568	31296770	31259568	31296770	-	ENST00000263694.8@SNRNP40	ENST00000263694.8	protein_coding	31296611,31293219,31291913,31289254,31281374,31271379,31269158,31267871,31261529,31259568	31296770,31293348,31292006,31289419,31281496,31271499,31269240,31267932,31261632,31260121	Gene ID= ENSG00000060688.12 TPM= 7.01 Transcript Type= protein_coding
chr1	31296982	31364953	31296982	31364953	+	ENST00000546109.5@ZCCHC17	ENST00000546109.5	protein_coding	31296982,31310044,31318167,31319109,31337175,31338957,31346640,31348829,31364032	31297075,31310164,31318236,31319166,31337275,31339048,31346740,31348974,31364953	Gene ID= ENSG00000121766.15 TPM= 4.67 Transcript Type= protein_coding
chr1	31297008	31364936	31297008	31364936	+	ENST00000373714.5@ZCCHC17	ENST00000373714.5	protein_coding	31297008,31310044,31319109,31337175,31338957,31346640,31348829,31364032	31297213,31310164,31319166,31337275,31339048,31346740,31348974,31364936	Gene ID= ENSG00000121766.15 TPM= 6.42 Transcript Type= protein_coding
chr1	31296995	31364936	31296995	31364936	+	ENST00000344147.9@ZCCHC17	ENST00000344147.9	protein_coding	31296995,31310044,31319109,31337175,31338957,31346640,31348829,31364032	31297075,31310164,31319166,31337275,31339048,31346740,31348974,31364936	Gene ID= ENSG00000121766.15 TPM= 28.61 Transcript Type= protein_coding
chr1	31359590	31373079	31359590	31373079	-	transcript3604.chr1.nnic@FABP3	transcript3604.chr1.nnic	protein_coding	31372942,31369385,31367393,31359590	31373079,31369557,31367494,31360830	Gene ID= ENSG00000121769.7 TPM= 4.67 Transcript Type= NA
chr1	31365625	31373076	31365625	31373076	-	ENST00000373713.6@FABP3	ENST00000373713.6	protein_coding	31372942,31369385,31367393,31365625	31373076,31369557,31367494,31365939	Gene ID= ENSG00000121769.7 TPM= 37.36 Transcript Type= protein_coding
chr1	31413116	31434678	31413116	31434678	+	ENST00000373709.7@SERINC2	ENST00000373709.7	protein_coding	31413116,31423693,31424683,31425330,31425776,31426654,31428978,31429397,31432967,31434064	31413304,31423854,31424873,31425409,31425913,31426823,31429068,31429538,31433185,31434678	Gene ID= ENSG00000168528.11 TPM= 132.52 Transcript Type= protein_coding
chr1	31576508	31587686	31576508	31587686	+	transcript3633.chr1.nic@TINAGL1	transcript3633.chr1.nic	protein_coding	31576508,31577134,31579204,31583149,31583461,31584678,31584886,31585151,31585440,31585753,31586839	31576595,31577458,31579267,31583241,31583575,31584801,31585036,31585340,31585485,31586755,31587686	Gene ID= ENSG00000142910.15 TPM= 22.57 Transcript Type= NA
chr1	31576510	31587686	31576510	31587686	+	transcript3634.chr1.nnic@TINAGL1	transcript3634.chr1.nnic	protein_coding	31576510,31577134,31579204,31583149,31583461,31584678,31584886,31585151,31585440,31586710,31586839	31576595,31577458,31579267,31583241,31583575,31584801,31585036,31585340,31585485,31586755,31587686	Gene ID= ENSG00000142910.15 TPM= 20.05 Transcript Type= NA
chr1	31576510	31587686	31576510	31587686	+	transcript3638.chr1.nic@TINAGL1	transcript3638.chr1.nic	protein_coding	31576510,31579204,31583149,31583461,31584678,31584886,31585151,31585440,31585753,31586710,31586839	31576595,31579267,31583241,31583575,31584801,31585036,31585340,31585485,31585876,31586755,31587686	Gene ID= ENSG00000142910.15 TPM= 19.7 Transcript Type= NA
chr1	31576535	31587686	31576535	31587686	+	ENST00000271064.11@TINAGL1	ENST00000271064.11	protein_coding	31576535,31577134,31579204,31583149,31583461,31584678,31584886,31585151,31585440,31585753,31586710,31586839	31576595,31577458,31579267,31583241,31583575,31584801,31585036,31585340,31585485,31585876,31586755,31587686	Gene ID= ENSG00000142910.15 TPM= 319.77 Transcript Type= protein_coding
chr1	31629862	31644887	31629862	31644887	-	ENST00000373703.4@PEF1	ENST00000373703.4	protein_coding	31644841,31635222,31633159,31632495,31629862	31644887,31635522,31633314,31632638,31630842	Gene ID= ENSG00000162517.12 TPM= 149.45 Transcript Type= protein_coding
chr1	31652247	31704319	31652247	31704319	-	ENST00000373672.7@COL16A1	ENST00000373672.7	protein_coding	31703837,31702121,31700041,31699813,31698483,31697906,31697220,31696963,31696088,31695761,31695186,31694144,31693092,31692767,31692598,31692474,31692005,31691598,31691417,31691188,31690529,31690367,31689741,31689050,31688861,31688467,31686244,31686091,31685639,31684821,31684523,31684109,31683950,31683707,31683334,31683194,31682934,31681023,31680905,31680042,31679804,31679632,31675258,31675007,31672724,31672596,31672416,31671615,31670602,31668802,31668165,31667575,31666037,31665882,31665583,31665172,31662587,31662334,31661660,31661414,31661066,31660585,31658914,31658488,31657033,31656400,31655314,31654792,31653867,31653599,31652247	31704319,31702227,31700115,31699930,31698606,31698172,31697300,31697088,31696141,31695787,31695221,31694170,31693154,31692808,31692642,31692509,31692067,31691642,31691512,31691226,31690573,31690393,31689851,31689085,31688971,31688502,31686279,31686135,31685770,31684856,31684630,31684231,31684003,31683748,31683369,31683247,31683002,31681067,31680931,31680101,31679851,31679685,31675311,31675039,31672840,31672637,31672502,31671659,31670646,31668855,31668218,31667628,31666081,31665935,31665618,31665234,31662658,31662387,31661704,31661458,31661119,31660638,31658964,31658577,31657068,31656444,31655502,31654858,31654043,31653676,31652853	Gene ID= ENSG00000084636.17 TPM= 2.34 Transcript Type= protein_coding
chr1	31652511	31704018	31652511	31704018	-	transcript3679.chr1.nic@COL16A1	transcript3679.chr1.nic	protein_coding	31703837,31702121,31700041,31699813,31698483,31697906,31697220,31696963,31696088,31695761,31695186,31694144,31693092,31692767,31692598,31692474,31692005,31691598,31691417,31691188,31690529,31690367,31689741,31689050,31688861,31688467,31686244,31686091,31685639,31684821,31684523,31684109,31683950,31683707,31683334,31683194,31682934,31681023,31680905,31680042,31679632,31675258,31675007,31672724,31672596,31672416,31671615,31670602,31668802,31668165,31667575,31666037,31665882,31665583,31665172,31662587,31662334,31661660,31661414,31661066,31660585,31658914,31658488,31657033,31656400,31655314,31654792,31653867,31653599,31652511	31704018,31702227,31700115,31699930,31698606,31698172,31697300,31697088,31696141,31695787,31695221,31694170,31693154,31692808,31692642,31692509,31692067,31691642,31691512,31691226,31690573,31690393,31689851,31689085,31688971,31688502,31686279,31686135,31685770,31684856,31684630,31684231,31684003,31683748,31683369,31683247,31683002,31681067,31680931,31680101,31679685,31675311,31675039,31672840,31672637,31672502,31671659,31670646,31668855,31668218,31667628,31666081,31665935,31665618,31665234,31662658,31662387,31661704,31661458,31661119,31660638,31658964,31658577,31657068,31656444,31655502,31654858,31654043,31653676,31652853	Gene ID= ENSG00000084636.17 TPM= 8.17 Transcript Type= NA
chr1	31727117	31759423	31727117	31759423	-	ENST00000398556.7@ADGRB2	ENST00000398556.7	protein_coding	31759321,31755999,31744648,31742838,31742053,31741800,31741624,31741373,31740347,31740110,31739926,31739308,31738832,31738587,31738200,31737652,31737429,31736573,31736321,31735827,31735580,31732972,31732517,31732115,31730800,31728598,31728182,31728025,31727117	31759423,31756815,31744731,31743002,31742217,31741967,31741725,31741479,31740541,31740178,31740034,31739635,31738937,31738630,31738326,31737755,31737531,31736723,31736390,31735893,31735665,31733143,31732612,31732154,31731419,31728633,31728280,31728081,31727605	Gene ID= ENSG00000121753.12 TPM= 2.34 Transcript Type= protein_coding
chr1	31790422	31799891	31790422	31799891	-	transcript3691.chr1.nic@SPOCD1	transcript3691.chr1.nic	protein_coding	31799809,31798442,31798207,31796590,31794124,31793747,31793278,31792678,31792215,31790422	31799891,31798601,31798323,31796715,31794235,31793897,31793428,31792767,31792401,31791252	Gene ID= ENSG00000134668.12 TPM= 16.35 Transcript Type= NA
chr1	31790433	31794937	31790433	31794937	-	transcript3694.chr1.nic@SPOCD1	transcript3694.chr1.nic	protein_coding	31794124,31793747,31793278,31792678,31790433	31794937,31793897,31793428,31792767,31792401	Gene ID= ENSG00000134668.12 TPM= 4.67 Transcript Type= NA
chr1	31790433	31794593	31790433	31794593	-	transcript3697.chr1.nic@SPOCD1	transcript3697.chr1.nic	protein_coding	31793278,31792678,31790433	31794593,31792767,31792401	Gene ID= ENSG00000134668.12 TPM= 4.67 Transcript Type= NA
chr1	31906421	31938399	31906421	31938399	-	transcript3713.chr1.nic@PTP4A2	transcript3713.chr1.nic	protein_coding	31937987,31918970,31915895,31911696,31910038,31906421	31938399,31919658,31915987,31911826,31910112,31908960	Gene ID= ENSG00000184007.18 TPM= 77.22 Transcript Type= NA
chr1	31906421	31919483	31906421	31919483	-	ENST00000602725.5@PTP4A2	ENST00000602725.5	protein_coding	31918970,31915895,31911696,31910038,31906421	31919483,31915987,31911826,31910112,31908960	Gene ID= ENSG00000184007.18 TPM= 52.54 Transcript Type= protein_coding
chr1	31925121	31928718	31925121	31928718	+	transcript3731.chr1.nnic@NA	transcript3731.chr1.nnic	NA	31925121	31928718	Gene ID= novel_gene_chr1_3732 TPM= 9.34 Transcript Type= NA
chr1	32013829	32043882	32013829	32043882	+	ENST00000327300.11@KHDRBS1	ENST00000327300.11	protein_coding	32013829,32030298,32031524,32033188,32036910,32037835,32038552,32039515,32042527	32014377,32030422,32031640,32033334,32037043,32038036,32038619,32039573,32043882	Gene ID= ENSG00000121774.17 TPM= 248.7 Transcript Type= protein_coding
chr1	32072943	32102866	32072943	32102866	+	ENST00000441402.5@TMEM39B	ENST00000441402.5	protein_coding	32072943,32074951,32075603,32091675,32094784,32100442,32102431	32073051,32075077,32075822,32092011,32094971,32100562,32102866	Gene ID= ENSG00000121775.17 TPM= 4.67 Transcript Type= nonsense_mediated_decay
chr1	32072902	32102861	32072902	32102861	+	ENST00000336294.9@TMEM39B	ENST00000336294.9	protein_coding	32072902,32074951,32075603,32076763,32077164,32091675,32094784,32100442,32102431	32073051,32075077,32075822,32076846,32077318,32092011,32094971,32100562,32102861	Gene ID= ENSG00000121775.17 TPM= 8.17 Transcript Type= protein_coding
chr1	32179660	32198285	32179660	32198285	+	transcript3760.chr1.nnic@TXLNA	transcript3760.chr1.nnic	protein_coding	32179660,32180314,32181242,32184525,32187954,32190055,32192311,32192657,32193208,32194065,32194902,32196021	32179776,32180514,32181577,32184616,32188124,32190249,32192430,32192731,32193300,32194160,32194937,32198285	Gene ID= ENSG00000084652.15 TPM= 10.22 Transcript Type= NA
chr1	32180074	32198285	32180074	32198285	+	transcript3769.chr1.nnic@TXLNA	transcript3769.chr1.nnic	protein_coding	32180074,32181242,32184525,32187954,32190055,32192311,32192657,32193208,32194065,32194902	32180514,32181676,32184616,32188124,32190249,32192430,32192731,32193300,32194160,32198285	Gene ID= ENSG00000084652.15 TPM= 41.74 Transcript Type= NA
chr1	32179686	32198285	32179686	32198285	+	ENST00000373610.7@TXLNA	ENST00000373610.7	protein_coding	32179686,32180314,32181242,32184525,32187954,32190055,32192311,32192657,32193208,32194065,32194902	32179776,32180514,32181577,32184616,32188124,32190249,32192430,32192731,32193300,32194160,32198285	Gene ID= ENSG00000084652.15 TPM= 59.84 Transcript Type= protein_coding
chr1	32180065	32198285	32180065	32198285	+	ENST00000373609.1@TXLNA	ENST00000373609.1	protein_coding	32180065,32181242,32184525,32187954,32190055,32192311,32192657,32193208,32194065,32194902	32180514,32181577,32184616,32188124,32190249,32192430,32192731,32193300,32194160,32198285	Gene ID= ENSG00000084652.15 TPM= 48.16 Transcript Type= protein_coding
chr1	32200386	32205387	32200386	32205387	+	ENST00000373602.9@CCDC28B	ENST00000373602.9	protein_coding	32200386,32201913,32203879,32204186,32204598,32205194	32200709,32202099,32204045,32204379,32204620,32205387	Gene ID= ENSG00000160050.14 TPM= 3.5 Transcript Type= protein_coding
chr1	32205661	32208687	32205661	32208687	+	ENST00000291358.10@IQCC	ENST00000291358.10	protein_coding	32205661,32206154,32206509,32207002,32207240	32205723,32206297,32206761,32207120,32208687	Gene ID= ENSG00000160051.11 TPM= 2.34 Transcript Type= protein_coding
chr1	32210852	32212955	32210852	32212955	+	transcript3786.chr1.nnic@NA	transcript3786.chr1.nnic	NA	32210852	32212955	Gene ID= novel_gene_chr1_3787 TPM= 5.84 Transcript Type= NA
chr1	32216197	32222325	32216197	32222325	-	ENST00000309777.10@TMEM234	ENST00000309777.10	protein_coding	32222307,32221867,32221131,32217259,32216197	32222325,32222018,32221197,32217351,32216947	Gene ID= ENSG00000160055.19 TPM= 2.34 Transcript Type= protein_coding
chr1	32222370	32231604	32222370	32231604	+	ENST00000373586.1@EIF3I	ENST00000373586.1	protein_coding	32222370,32222538,32224034,32224410,32226171,32226403,32228499,32228727,32229135,32230927,32231115	32222444,32222630,32224121,32224475,32226320,32226530,32228609,32228816,32229208,32231019,32231604	Gene ID= ENSG00000084623.11 TPM= 134.27 Transcript Type= protein_coding
chr1	32231660	32241664	32231660	32241664	-	transcript3804.chr1.nnic@MTMR9LP	transcript3804.chr1.nnic	transcribed_unprocessed_pseudogene	32241137,32239869,32239295,32234952,32234704,32232042,32231660	32241664,32240847,32239425,32235113,32234814,32232184,32231969	Gene ID= ENSG00000220785.7 TPM= 5.64 Transcript Type= NA
chr1	32231660	32241643	32231660	32241643	-	transcript3810.chr1.nic@MTMR9LP	transcript3810.chr1.nic	transcribed_unprocessed_pseudogene	32239869,32239295,32234952,32234704,32232042,32231660	32241643,32239425,32235113,32234814,32232184,32231969	Gene ID= ENSG00000220785.7 TPM= 6.22 Transcript Type= NA
chr1	32231660	32241707	32231660	32241707	-	transcript3813.chr1.nic@MTMR9LP	transcript3813.chr1.nic	transcribed_unprocessed_pseudogene	32239869,32234952,32234704,32232042,32231660	32241707,32235113,32234814,32232184,32231969	Gene ID= ENSG00000220785.7 TPM= 6.81 Transcript Type= NA
chr1	32247233	32248856	32247233	32248856	+	ENST00000373582.3@FAM167B	ENST00000373582.3	protein_coding	32247233,32248371	32247682,32248856	Gene ID= ENSG00000183615.5 TPM= 43.2 Transcript Type= protein_coding
chr1	32247235	32248855	32247235	32248855	+	transcript3816.chr1.nnic@NA	transcript3816.chr1.nnic	NA	32247235	32248855	Gene ID= novel_gene_chr1_3817 TPM= 2.34 Transcript Type= NA
chr1	32251239	32286165	32251239	32286165	+	ENST00000336890.9@LCK	ENST00000336890.9	protein_coding	32251239,32274325,32274737,32274993,32275321,32275569,32275914,32276337,32276607,32279671,32279841,32280079,32285514	32251371,32274434,32274818,32275083,32275419,32275672,32276063,32276489,32276786,32279747,32279994,32280210,32286165	Gene ID= ENSG00000182866.16 TPM= 29.19 Transcript Type= protein_coding
chr1	32292101	32333635	32292101	32333635	+	transcript3827.chr1.nic@HDAC1	transcript3827.chr1.nic	protein_coding	32292101,32302621,32316665,32324479,32326939,32327536,32330768,32331474,32331676,32332090,32332701,32333017	32292218,32302733,32316782,32324553,32327077,32330686,32330908,32331582,32331806,32332242,32332749,32333635	Gene ID= ENSG00000116478.11 TPM= 4.67 Transcript Type= NA
chr1	32292086	32333635	32292086	32333635	+	ENST00000373548.7@HDAC1	ENST00000373548.7	protein_coding	32292086,32302621,32316665,32324479,32326939,32327536,32329068,32330578,32330768,32331474,32331676,32332090,32332701,32333017	32292218,32302733,32316782,32324553,32327077,32327677,32329160,32330686,32330908,32331582,32331806,32332242,32332749,32333635	Gene ID= ENSG00000116478.11 TPM= 154.12 Transcript Type= protein_coding
chr1	32333839	32336233	32333839	32336233	-	transcript3832.chr1.nnic@MARCKSL1	transcript3832.chr1.nnic	protein_coding	32336172,32333839	32336233,32335097	Gene ID= ENSG00000175130.6 TPM= 18.68 Transcript Type= NA
chr1	32354608	32357458	32354608	32357458	-	transcript3833.chr1.nnic@NA	transcript3833.chr1.nnic	NA	32354608	32357458	Gene ID= novel_gene_chr1_3834 TPM= 7.01 Transcript Type= NA
chr1	32361270	32362542	32361270	32362542	-	transcript3855.chr1.nnic@NA	transcript3855.chr1.nnic	NA	32361270	32362542	Gene ID= novel_gene_chr1_3856 TPM= 3.5 Transcript Type= NA
chr1	32362858	32364489	32362858	32364489	+	transcript3851.chr1.nnic@NA	transcript3851.chr1.nnic	NA	32362858	32364489	Gene ID= novel_gene_chr1_3852 TPM= 2.34 Transcript Type= NA
chr1	32365103	32394448	32365103	32394448	-	ENST00000455895.6@BSDC1	ENST00000455895.6	protein_coding	32394404,32394080,32386779,32383830,32381214,32378724,32378215,32377970,32376262,32368447,32365103	32394448,32394140,32386895,32383997,32381268,32378839,32378283,32378048,32376741,32368550,32366654	Gene ID= ENSG00000160058.18 TPM= 81.73 Transcript Type= protein_coding
chr1	32368033	32394444	32368033	32394444	-	transcript3847.chr1.nic@BSDC1	transcript3847.chr1.nic	protein_coding	32394404,32394080,32386779,32383830,32381214,32378724,32378215,32377970,32376262,32368033	32394444,32394140,32386895,32383997,32381268,32378839,32378283,32378048,32376741,32368550	Gene ID= ENSG00000160058.18 TPM= 9.34 Transcript Type= NA
chr1	32539427	32605939	32539427	32605939	+	ENST00000373510.8@ZBTB8A	ENST00000373510.8	protein_coding	32539427,32553459,32592931,32595054,32600087	32539572,32553540,32593754,32595223,32605939	Gene ID= ENSG00000160062.14 TPM= 2.34 Transcript Type= protein_coding
chr1	32620820	32650584	32620820	32650584	-	ENST00000468695.5@ZBTB8OS	ENST00000468695.5	protein_coding	32650433,32634768,32633951,32633645,32631827,32627508,32620820	32650584,32634792,32634072,32633727,32631879,32627544,32621948	Gene ID= ENSG00000176261.15 TPM= 7.01 Transcript Type= protein_coding
chr1	32621830	32650525	32621830	32650525	-	ENST00000373501.6@ZBTB8OS	ENST00000373501.6	protein_coding	32650433,32634702,32633951,32633645,32631827,32627508,32621830	32650525,32634792,32634072,32633727,32631879,32627544,32621948	Gene ID= ENSG00000176261.15 TPM= 1.17 Transcript Type= protein_coding
chr1	32651149	32680653	32651149	32680653	+	transcript3863.chr1.nic@RBBP4	transcript3863.chr1.nic	protein_coding	32651149,32651914,32657427,32668225,32668739,32668972,32669231,32669486,32672450,32672642,32672791,32673459,32679640	32651322,32652061,32657572,32668398,32668854,32669132,32669357,32669563,32672526,32672699,32672901,32673580,32680653	Gene ID= ENSG00000162521.18 TPM= 6.42 Transcript Type= NA
chr1	32651148	32686211	32651148	32686211	+	ENST00000373493.9@RBBP4	ENST00000373493.9	protein_coding	32651148,32651914,32657427,32668225,32668739,32668972,32669231,32669486,32672450,32672642,32672791,32679640	32651322,32652061,32657572,32668398,32668854,32669132,32669357,32669563,32672526,32672699,32672901,32686211	Gene ID= ENSG00000162521.18 TPM= 105.67 Transcript Type= protein_coding
chr1	32651234	32680657	32651234	32680657	+	ENST00000373485.5@RBBP4	ENST00000373485.5	protein_coding	32651234,32651914,32657427,32668225,32668739,32668972,32669231,32669486,32672450,32672642,32672791,32680526	32651322,32652061,32657572,32668398,32668854,32669132,32669357,32669563,32672526,32672699,32672901,32680657	Gene ID= ENSG00000162521.18 TPM= 2.34 Transcript Type= protein_coding
chr1	32680089	32702780	32680089	32702780	-	transcript3885.chr1.nnic@SYNC	transcript3885.chr1.nnic	protein_coding	32702608,32694880,32684258,32684010,32680089	32702780,32696044,32684382,32684089,32681860	Gene ID= ENSG00000162520.14 TPM= 4.09 Transcript Type= NA
chr1	32680360	32703119	32680360	32703119	-	ENST00000409190.7@SYNC	ENST00000409190.7	protein_coding	32702608,32694865,32684258,32684010,32680360	32703119,32696044,32684382,32684089,32681860	Gene ID= ENSG00000162520.14 TPM= 7.59 Transcript Type= protein_coding
chr1	32771216	32774970	32771216	32774970	+	transcript3930.chr1.nic@KIAA1522	transcript3930.chr1.nic	protein_coding	32771216,32772865	32772441,32774970	Gene ID= ENSG00000162522.10 TPM= 105.08 Transcript Type= NA
chr1	32775239	32818153	32775239	32818153	-	ENST00000373477.8@YARS	ENST00000373477.8	protein_coding	32817188,32810911,32810591,32806482,32797763,32791162,32786940,32786362,32782404,32781048,32780085,32779382,32775239	32818153,32811057,32810766,32806611,32797843,32791254,32787075,32786447,32782539,32781145,32780278,32779523,32776091	Gene ID= ENSG00000134684.10 TPM= 91.85 Transcript Type= protein_coding
chr1	32775239	32817364	32775239	32817364	-	transcript3912.chr1.nnic@YARS	transcript3912.chr1.nnic	protein_coding	32817188,32810911,32810591,32797763,32791162,32786940,32786362,32782404,32781048,32780085,32779382,32775239	32817364,32811057,32810766,32797843,32791254,32787075,32786447,32782539,32781145,32780278,32779523,32776091	Gene ID= ENSG00000134684.10 TPM= 5.45 Transcript Type= NA
chr1	32775239	32817357	32775239	32817357	-	transcript3915.chr1.nic@YARS	transcript3915.chr1.nic	protein_coding	32817188,32810911,32810591,32806482,32797763,32791162,32786362,32782404,32781048,32780085,32779382,32775239	32817357,32811057,32810766,32806611,32797843,32791254,32787075,32782539,32781145,32780278,32779523,32776091	Gene ID= ENSG00000134684.10 TPM= 6.62 Transcript Type= NA
chr1	32817555	32858879	32817555	32858879	+	ENST00000373475.9@S100PBP	ENST00000373475.9	protein_coding	32817555,32825313,32826098,32827993,32829964,32853079,32855924	32817689,32825429,32826930,32828081,32830067,32853166,32858879	Gene ID= ENSG00000116497.17 TPM= 14.01 Transcript Type= protein_coding
chr1	32862268	32870922	32862268	32870922	-	transcript3934.chr1.nic@FNDC5	transcript3934.chr1.nic	protein_coding	32870653,32868882,32868190,32867753,32864664,32862268	32870922,32868997,32868388,32867842,32864797,32863776	Gene ID= ENSG00000160097.16 TPM= 2.34 Transcript Type= NA
chr1	32862268	32870922	32862268	32870922	-	transcript3937.chr1.nic@FNDC5	transcript3937.chr1.nic	protein_coding	32870653,32868882,32868190,32867753,32862268	32870922,32868997,32868388,32867842,32864797	Gene ID= ENSG00000160097.16 TPM= 2.34 Transcript Type= NA
chr1	32894595	32901399	32894595	32901399	-	transcript3941.chr1.nnic@TMEM54	transcript3941.chr1.nnic	protein_coding	32901223,32898126,32895910,32895555,32895305,32894595	32901399,32898361,32895969,32895743,32895439,32894879	Gene ID= ENSG00000121900.18 TPM= 2.92 Transcript Type= NA
chr1	32894595	32901426	32894595	32901426	-	transcript3942.chr1.nnic@TMEM54	transcript3942.chr1.nnic	protein_coding	32901223,32898126,32895910,32895555,32895305,32894595	32901426,32898319,32895969,32895743,32895439,32894897	Gene ID= ENSG00000121900.18 TPM= 2.34 Transcript Type= NA
chr1	32894595	32901426	32894595	32901426	-	transcript3943.chr1.nnic@TMEM54	transcript3943.chr1.nnic	protein_coding	32901223,32898126,32895910,32895555,32895305,32894595	32901426,32898319,32895969,32895743,32895439,32894933	Gene ID= ENSG00000121900.18 TPM= 7.01 Transcript Type= NA
chr1	32894595	32901358	32894595	32901358	-	ENST00000373463.7@TMEM54	ENST00000373463.7	protein_coding	32901223,32898126,32895910,32895555,32895305,32894595	32901358,32898319,32895969,32895743,32895439,32894879	Gene ID= ENSG00000121900.18 TPM= 79.98 Transcript Type= protein_coding
chr1	32936454	32964685	32936454	32964685	-	ENST00000356990.9@RNF19B	ENST00000356990.9	protein_coding	32964051,32949569,32948222,32946402,32945514,32944019,32942252,32938397,32936454	32964685,32949774,32948363,32946564,32945628,32944159,32942459,32938528,32937309	Gene ID= ENSG00000116514.16 TPM= 5.84 Transcript Type= protein_coding
chr1	33008883	33036893	33008883	33036893	-	transcript3954.chr1.nic@AK2	transcript3954.chr1.nic	protein_coding	33036736,33031544,33024442,33021593,33021367,33014522,33013207,33008883	33036893,33031661,33024567,33021703,33021461,33014594,33013402,33010833	Gene ID= ENSG00000004455.16 TPM= 5.84 Transcript Type= NA
chr1	33008883	33036861	33008883	33036861	-	transcript3958.chr1.nic@AK2	transcript3958.chr1.nic	protein_coding	33036736,33024442,33021593,33021367,33014522,33012074,33008883	33036861,33024567,33021703,33021461,33014594,33013402,33010833	Gene ID= ENSG00000004455.16 TPM= 4.67 Transcript Type= NA
chr1	33013044	33036992	33013044	33036992	-	ENST00000354858.10@AK2	ENST00000354858.10	protein_coding	33036736,33024442,33021593,33021367,33014522,33013044	33036992,33024567,33021703,33021461,33014594,33013402	Gene ID= ENSG00000004455.16 TPM= 40.28 Transcript Type= protein_coding
chr1	33013044	33036877	33013044	33036877	-	ENST00000480134.5@AK2	ENST00000480134.5	protein_coding	33036736,33024442,33021593,33014522,33013044	33036877,33024567,33021703,33014594,33013402	Gene ID= ENSG00000004455.16 TPM= 6.42 Transcript Type= protein_coding
chr1	33145402	33181666	33145402	33181666	-	ENST00000291416.9@TRIM62	ENST00000291416.9	protein_coding	33181025,33165471,33159688,33158253,33145402	33181666,33165566,33159944,33158368,33147727	Gene ID= ENSG00000116525.13 TPM= 2.34 Transcript Type= protein_coding
chr1	33256296	33300719	33256296	33300719	+	transcript3979.chr1.nic@ZNF362	transcript3979.chr1.nic	protein_coding	33256296,33276100,33276348,33280124,33281587,33294937,33295147,33298930	33256654,33276163,33276594,33280457,33281811,33295015,33295305,33300719	Gene ID= ENSG00000160094.14 TPM= 27.44 Transcript Type= NA
chr1	33323626	33349967	33323626	33349967	-	transcript3996.chr1.nic@PHC2	transcript3996.chr1.nic	protein_coding	33349597,33334185,33332275,33331348,33330071,33328870,33323626	33349967,33334292,33332404,33331462,33330212,33329146,33325019	Gene ID= ENSG00000134686.18 TPM= 116.46 Transcript Type= NA
chr1	33323626	33349885	33323626	33349885	-	ENST00000373418.7@PHC2	ENST00000373418.7	protein_coding	33349597,33334090,33332275,33331348,33330071,33328870,33323626	33349885,33334292,33332404,33331462,33330212,33329146,33325019	Gene ID= ENSG00000134686.18 TPM= 202.86 Transcript Type= protein_coding
chr1	34781189	34786364	34781189	34786364	+	ENST00000373366.2@GJB3	ENST00000373366.2	protein_coding	34781189,34784738	34781778,34786364	Gene ID= ENSG00000188910.7 TPM= 4.67 Transcript Type= protein_coding
chr1	34792998	34795747	34792998	34795747	+	ENST00000342280.4@GJA4	ENST00000342280.4	protein_coding	34792998,34794197	34793068,34795747	Gene ID= ENSG00000187513.8 TPM= 31.53 Transcript Type= protein_coding
chr1	34852669	34859816	34852669	34859816	-	ENST00000521580.2@SMIM12	ENST00000521580.2	protein_coding	34859677,34852669	34859816,34855982	Gene ID= ENSG00000163866.8 TPM= 2.34 Transcript Type= protein_coding
chr1	34981535	34985353	34981535	34985353	-	ENST00000373337.3@TMEM35B	ENST00000373337.3	protein_coding	34985198,34983767,34981535	34985353,34983947,34982119	Gene ID= ENSG00000243749.1 TPM= 78.23 Transcript Type= protein_coding
chr1	34986980	35031968	34986980	35031968	-	ENST00000357182.8@ZMYM6	ENST00000357182.8	protein_coding	35031815,35030547,35020383,35019353,35014988,35014697,35012431,35011890,35010758,35010447,35008752,35006951,35005132,35003968,34992234,34986980	35031968,35030713,35020467,35019602,35015162,35014888,35012581,35012005,35011036,35010597,35008924,35007098,35005272,35004005,34992387,34988935	Gene ID= ENSG00000163867.16 TPM= 1.17 Transcript Type= protein_coding
chr1	35079380	35115854	35079380	35115854	+	transcript4037.chr1.nic@ZMYM1	transcript4037.chr1.nic	protein_coding	35079380,35093320,35093914,35095819,35097317,35104295,35104557,35110294,35111772,35112087,35112977	35079442,35093441,35094083,35095891,35097566,35104469,35104769,35110447,35111912,35112130,35115854	Gene ID= ENSG00000197056.9 TPM= 3.5 Transcript Type= NA
chr1	35079367	35115855	35079367	35115855	+	ENST00000359858.8@ZMYM1	ENST00000359858.8	protein_coding	35079367,35093914,35095819,35097317,35104295,35104557,35110294,35111772,35112087,35112977	35079442,35094083,35095891,35097566,35104469,35104769,35110447,35111912,35112130,35115855	Gene ID= ENSG00000197056.9 TPM= 3.5 Transcript Type= protein_coding
chr1	35079391	35115854	35079391	35115854	+	ENST00000373329.5@ZMYM1	ENST00000373329.5	protein_coding	35079391,35095819,35097317,35104295,35104557,35110294,35111772,35112087,35112977	35079442,35095891,35097566,35104469,35104769,35110447,35111912,35112130,35115854	Gene ID= ENSG00000197056.9 TPM= 2.34 Transcript Type= processed_transcript
chr1	35176380	35193146	35176380	35193146	-	transcript4050.chr1.nic@SFPQ	transcript4050.chr1.nic	protein_coding	35192222,35191341,35190694,35190498,35189186,35189003,35187973,35187203,35187001,35177989,35177319,35176380	35193146,35191529,35190995,35190593,35189382,35189087,35188090,35187251,35187122,35178036,35177399,35176474	Gene ID= ENSG00000116560.10 TPM= 70.84 Transcript Type= NA
chr1	35182932	35193148	35182932	35193148	-	ENST00000357214.5@SFPQ	ENST00000357214.5	protein_coding	35192222,35191341,35190694,35190498,35189186,35189003,35187973,35187203,35187001,35182932	35193148,35191529,35190995,35190593,35189382,35189087,35188090,35187251,35187122,35184593	Gene ID= ENSG00000116560.10 TPM= 17.51 Transcript Type= protein_coding
chr1	35433490	35557415	35433490	35557415	-	transcript4083.chr1.nic@KIAA0319L	transcript4083.chr1.nic	protein_coding	35557362,35554350,35506612,35478966,35474805,35470863,35466608,35462621,35460305,35456013,35454362,35453557,35451628,35450358,35449867,35448173,35444161,35442906,35442246,35441047,35433490	35557415,35554519,35507135,35479212,35474906,35470960,35466695,35462713,35460437,35456241,35454485,35453689,35451776,35450509,35450005,35448332,35444303,35443028,35442336,35441138,35435081	Gene ID= ENSG00000142687.17 TPM= 3.89 Transcript Type= NA
chr1	35433490	35557413	35433490	35557413	-	ENST00000325722.7@KIAA0319L	ENST00000325722.7	protein_coding	35557207,35554350,35506612,35478966,35474805,35470863,35466608,35462621,35460305,35456013,35454362,35453557,35451628,35450358,35449867,35448173,35444161,35442906,35442246,35441047,35433490	35557413,35554519,35507135,35479212,35474906,35470960,35466695,35462713,35460437,35456241,35454485,35453689,35451776,35450509,35450005,35448332,35444303,35443028,35442336,35441138,35435081	Gene ID= ENSG00000142687.17 TPM= 49.42 Transcript Type= protein_coding
chr1	35557808	35566773	35557808	35566773	+	ENST00000373243.6@NCDN	ENST00000373243.6	protein_coding	35557808,35559107,35560326,35562392,35563202,35563767,35565227	35558223,35559247,35561294,35562633,35563426,35563909,35566773	Gene ID= ENSG00000020129.15 TPM= 26.27 Transcript Type= protein_coding
chr1	35557792	35566779	35557792	35566779	+	ENST00000356090.8@NCDN	ENST00000356090.8	protein_coding	35557792,35558156,35559107,35560326,35562392,35563202,35563767,35565227	35557883,35558223,35559247,35561294,35562633,35563426,35563909,35566779	Gene ID= ENSG00000020129.15 TPM= 34.44 Transcript Type= protein_coding
chr1	35601584	35641844	35601584	35641844	-	ENST00000373237.3@PSMB2	ENST00000373237.3	protein_coding	35641342,35636310,35631274,35609246,35605233,35601584	35641844,35636432,35631344,35609408,35605282,35603374	Gene ID= ENSG00000126067.11 TPM= 68.89 Transcript Type= protein_coding
chr1	35713875	35719472	35713875	35719472	-	ENST00000270815.4@C1orf216	ENST00000270815.4	protein_coding	35718707,35713875	35719472,35716326	Gene ID= ENSG00000142686.7 TPM= 60.71 Transcript Type= protein_coding
chr1	35808004	35853268	35808004	35853268	+	transcript4118.chr1.nic@AGO4	transcript4118.chr1.nic	protein_coding	35808004,35816882,35822862,35825313,35825679,35825926,35826748,35831427,35831812,35832057,35832437,35833990,35835834,35841165,35841616,35850157,35850854	35808435,35817047,35822982,35825494,35825815,35826060,35826835,35831574,35831931,35832185,35832570,35834174,35835993,35841480,35841750,35850258,35853268	Gene ID= ENSG00000134698.10 TPM= 2.34 Transcript Type= NA
chr1	35808004	35818631	35808004	35818631	+	transcript4144.chr1.nic@AGO4	transcript4144.chr1.nic	protein_coding	35808004,35816882	35808435,35818631	Gene ID= ENSG00000134698.10 TPM= 2.34 Transcript Type= NA
chr1	35808172	35857890	35808172	35857890	+	ENST00000373210.3@AGO4	ENST00000373210.3	protein_coding	35808172,35816882,35822862,35825313,35825679,35825926,35826748,35831427,35831812,35832057,35832437,35833990,35835834,35841165,35841616,35850157,35850854,35853497	35808435,35817047,35822982,35825494,35825815,35826060,35826835,35831574,35831931,35832185,35832570,35834174,35835993,35841480,35841750,35850258,35851053,35857890	Gene ID= ENSG00000134698.10 TPM= 7.01 Transcript Type= protein_coding
chr1	35883209	35930528	35883209	35930528	+	ENST00000373204.5@AGO1	ENST00000373204.5	protein_coding	35883209,35888427,35892557,35893097,35893674,35894037,35894315,35895122,35901474,35901948,35902204,35906935,35913842,35914184,35915348,35917593,35918322,35919055,35919499	35883446,35888610,35892677,35893278,35893810,35894171,35894402,35895269,35901593,35902070,35902337,35907119,35914001,35914274,35915542,35917727,35918423,35919254,35930528	Gene ID= ENSG00000092847.11 TPM= 19.85 Transcript Type= protein_coding
chr1	35930718	36056127	35930718	36056127	+	transcript4156.chr1.nic@AGO3	transcript4156.chr1.nic	protein_coding	35930718,35931229,35945692,35966955,35972024,35973375,36004341,36008690,36008897,36009475,36013630,36013915,36027114,36034174,36036177,36039790,36040307,36043447,36054946,36055637	35930798,35931445,35945863,35967075,35972232,35973511,36004475,36008777,36009044,36009594,36013752,36014048,36027298,36034333,36036267,36039984,36040441,36043548,36055145,36056127	Gene ID= ENSG00000126070.19 TPM= 4.67 Transcript Type= NA
chr1	35930718	35986374	35930718	35986374	+	transcript4164.chr1.nic@AGO3	transcript4164.chr1.nic	protein_coding	35930718,35931229,35945692,35966955,35972024,35973375,35982621,35984470	35930798,35931445,35945863,35967075,35972232,35973511,35982712,35986374	Gene ID= ENSG00000126070.19 TPM= 2.34 Transcript Type= NA
chr1	36088875	36093932	36088875	36093932	+	ENST00000373178.4@ADPRHL2	ENST00000373178.4	protein_coding	36088875,36091244,36091618,36091910,36092422,36093097	36089115,36091340,36091825,36092094,36092522,36093932	Gene ID= ENSG00000116863.10 TPM= 108.59 Transcript Type= protein_coding
chr1	36095241	36125713	36095241	36125713	-	transcript4181.chr1.nnic@COL8A2	transcript4181.chr1.nnic	protein_coding	36125480,36115708,36100050,36095241	36125713,36115752,36100258,36099487	Gene ID= ENSG00000171812.12 TPM= 15.56 Transcript Type= NA
chr1	36095424	36125196	36095424	36125196	-	transcript4183.chr1.nic@COL8A2	transcript4183.chr1.nic	protein_coding	36125057,36115708,36100195,36095424	36125196,36115752,36100258,36099487	Gene ID= ENSG00000171812.12 TPM= 2.72 Transcript Type= NA
chr1	36095236	36125220	36095236	36125220	-	ENST00000397799.1@COL8A2	ENST00000397799.1	protein_coding	36125057,36115708,36100050,36095236	36125220,36115752,36100258,36099487	Gene ID= ENSG00000171812.12 TPM= 35.41 Transcript Type= protein_coding
chr1	36136572	36149469	36136572	36149469	-	ENST00000373166.7@TRAPPC3	ENST00000373166.7	protein_coding	36149337,36140069,36139720,36137796,36136572	36149469,36140166,36139819,36137978,36137322	Gene ID= ENSG00000054116.11 TPM= 16.35 Transcript Type= protein_coding
chr1	36156144	36180849	36156144	36180849	+	transcript4196.chr1.nic@MAP7D1	transcript4196.chr1.nic	protein_coding	36156144,36170971,36171513,36172464,36173364,36174898,36176199,36176697,36177873,36178446,36178685,36178921,36179262,36179515,36179666,36179874,36180248	36156463,36171315,36171581,36172627,36173478,36175008,36176581,36176842,36178201,36178596,36178823,36179025,36179315,36179557,36179756,36180067,36180849	Gene ID= ENSG00000116871.15 TPM= 8.85 Transcript Type= NA
chr1	36156144	36180849	36156144	36180849	+	transcript4198.chr1.nic@MAP7D1	transcript4198.chr1.nic	protein_coding	36156144,36170971,36171513,36172464,36173364,36176199,36176418,36176697,36177873,36178419,36178685,36178921,36179262,36179515,36179666,36179874,36180248	36156463,36171315,36171581,36172627,36173478,36176321,36176581,36176842,36178201,36178596,36178823,36179025,36179315,36179557,36179756,36180067,36180849	Gene ID= ENSG00000116871.15 TPM= 27.52 Transcript Type= NA
chr1	36155965	36180849	36155965	36180849	+	ENST00000316156.8@MAP7D1	ENST00000316156.8	protein_coding	36155965,36170971,36171513,36172464,36173364,36176199,36176697,36177873,36178419,36178685,36178921,36179262,36179515,36179666,36179874,36180248	36156463,36171315,36171581,36172627,36173478,36176581,36176842,36178201,36178596,36178823,36179025,36179315,36179557,36179756,36180067,36180849	Gene ID= ENSG00000116871.15 TPM= 36.57 Transcript Type= protein_coding
chr1	36156198	36180849	36156198	36180849	+	ENST00000373150.8@MAP7D1	ENST00000373150.8	protein_coding	36156198,36170971,36171513,36172464,36173364,36174898,36176199,36176418,36176697,36177873,36178419,36178685,36178921,36179262,36179515,36179666,36179874,36180248	36156463,36171315,36171581,36172627,36173478,36175008,36176321,36176581,36176842,36178201,36178596,36178823,36179025,36179315,36179557,36179756,36180067,36180849	Gene ID= ENSG00000116871.15 TPM= 44.81 Transcript Type= protein_coding
chr1	36156202	36180840	36156202	36180840	+	ENST00000373151.6@MAP7D1	ENST00000373151.6	protein_coding	36156202,36170971,36171513,36172464,36173364,36174898,36176199,36176697,36177873,36178419,36178685,36178921,36179262,36179512,36179666,36179874,36180248	36156463,36171315,36171581,36172627,36173478,36175008,36176581,36176842,36178201,36178596,36178823,36179025,36179315,36179557,36179756,36180067,36180840	Gene ID= ENSG00000116871.15 TPM= 50.65 Transcript Type= protein_coding
chr1	36224416	36305357	36224416	36305357	+	ENST00000354618.9@THRAP3	ENST00000354618.9	protein_coding	36224416,36259382,36282533,36286368,36289060,36291374,36292598,36293851,36296583,36300886,36301553,36303796	36224505,36259484,36282700,36287270,36289764,36291546,36292709,36293935,36296770,36301084,36301696,36305357	Gene ID= ENSG00000054118.13 TPM= 75.89 Transcript Type= protein_coding
chr1	36293030	36295704	36293030	36295704	-	transcript4226.chr1.nnic@NA	transcript4226.chr1.nnic	NA	36293030	36295704	Gene ID= novel_gene_chr1_4227 TPM= 3.5 Transcript Type= NA
chr1	36313974	36314918	36313974	36314918	-	transcript4234.chr1.nnic@NA	transcript4234.chr1.nnic	NA	36313974	36314918	Gene ID= novel_gene_chr1_4235 TPM= 2.34 Transcript Type= NA
chr1	36322030	36323642	36322030	36323642	-	transcript4233.chr1.nnic@EVA1B	transcript4233.chr1.nnic	protein_coding	36323459,36322030	36323642,36322725	Gene ID= ENSG00000142694.6 TPM= 14.01 Transcript Type= NA
chr1	36339624	36385938	36339624	36385938	-	transcript4237.chr1.nnic@STK40	transcript4237.chr1.nnic	protein_coding	36385723,36367852,36362559,36361221,36358737,36358239,36355206,36354364,36348700,36344120,36343860,36343364,36339624	36385938,36368084,36362656,36361340,36358822,36358382,36355433,36354416,36348815,36344264,36343979,36343448,36341973	Gene ID= ENSG00000196182.10 TPM= 13.43 Transcript Type= NA
chr1	36339624	36385938	36339624	36385938	-	transcript4239.chr1.nic@STK40	transcript4239.chr1.nic	protein_coding	36385723,36367852,36361221,36358737,36358239,36355206,36354364,36348700,36344120,36343860,36343364,36339624	36385938,36368084,36361340,36358822,36358382,36355433,36354416,36348815,36344264,36343979,36343448,36341973	Gene ID= ENSG00000196182.10 TPM= 15.76 Transcript Type= NA
chr1	36347646	36385918	36347646	36385918	-	transcript4251.chr1.nic@STK40	transcript4251.chr1.nic	protein_coding	36385723,36361221,36358737,36358239,36355206,36354364,36347646	36385918,36361340,36358822,36358382,36355433,36354416,36348815	Gene ID= ENSG00000196182.10 TPM= 2.34 Transcript Type= NA
chr1	36356413	36385918	36356413	36385918	-	transcript4253.chr1.nic@STK40	transcript4253.chr1.nic	protein_coding	36385723,36361221,36358737,36356413	36385918,36361340,36358822,36358382	Gene ID= ENSG00000196182.10 TPM= 2.34 Transcript Type= NA
chr1	36339624	36385896	36339624	36385896	-	ENST00000373132.3@STK40	ENST00000373132.3	protein_coding	36385723,36361221,36358737,36358239,36355206,36354364,36348700,36344120,36343860,36343364,36339624	36385896,36361340,36358822,36358382,36355433,36354416,36348815,36344264,36343979,36343448,36341973	Gene ID= ENSG00000196182.10 TPM= 42.62 Transcript Type= protein_coding
chr1	36339624	36385884	36339624	36385884	-	ENST00000373129.7@STK40	ENST00000373129.7	protein_coding	36385723,36367848,36361221,36358737,36358239,36355206,36354364,36348700,36344120,36343860,36343364,36339624	36385884,36368084,36361340,36358822,36358382,36355433,36354416,36348815,36344264,36343979,36343448,36341973	Gene ID= ENSG00000196182.10 TPM= 25.1 Transcript Type= protein_coding
chr1	36384033	36385918	36384033	36385918	-	transcript4255.chr1.nnic@NA	transcript4255.chr1.nnic	NA	36384033	36385918	Gene ID= novel_gene_chr1_4256 TPM= 3.5 Transcript Type= NA
chr1	36393430	36397892	36393430	36397892	-	ENST00000315732.2@LSM10	ENST00000315732.2	protein_coding	36397767,36393430	36397892,36394153	Gene ID= ENSG00000181817.5 TPM= 32.69 Transcript Type= protein_coding
chr1	36417906	36450451	36417906	36450451	-	ENST00000235532.9@OSCP1	ENST00000235532.9	protein_coding	36450258,36438756,36432422,36431802,36423363,36422768,36422150,36420476,36418991,36417906	36450451,36438910,36432589,36431882,36423466,36422896,36422219,36420615,36419054,36418255	Gene ID= ENSG00000116885.18 TPM= 8.17 Transcript Type= protein_coding
chr1	36455718	36464437	36455718	36464437	-	ENST00000373116.5@MRPS15	ENST00000373116.5	protein_coding	36464146,36463806,36462088,36461264,36460692,36457923,36456187,36455718	36464437,36463850,36462163,36461312,36460776,36457981,36456378,36455925	Gene ID= ENSG00000116898.11 TPM= 61.88 Transcript Type= protein_coding
chr1	36455774	36464417	36455774	36464417	-	transcript4296.chr1.nnic@MRPS15	transcript4296.chr1.nnic	protein_coding	36464219,36463806,36462088,36461264,36460692,36457923,36456187,36455774	36464417,36463850,36462163,36461312,36460776,36457981,36456378,36455925	Gene ID= ENSG00000116898.11 TPM= 2.34 Transcript Type= NA
chr1	36466043	36482913	36466043	36482913	-	transcript4275.chr1.nnic@CSF3R	transcript4275.chr1.nnic	protein_coding	36482811,36481478,36479433,36477605,36475377,36473764,36472517,36472238,36472066,36471433,36469652,36469156,36468075,36467822,36467558,36467230,36466043	36482913,36481537,36479516,36477677,36475673,36473887,36472686,36472391,36472139,36471646,36469840,36469257,36468221,36467962,36467651,36467311,36466827	Gene ID= ENSG00000119535.17 TPM= 22.39 Transcript Type= NA
chr1	36466043	36482913	36466043	36482913	-	transcript4280.chr1.nnic@CSF3R	transcript4280.chr1.nnic	protein_coding	36482811,36481478,36479433,36475377,36473764,36473435,36472517,36472289,36471433,36469652,36469156,36468075,36467822,36467558,36467230,36466043	36482913,36481537,36479516,36475673,36473887,36473622,36472686,36472391,36471582,36469840,36469257,36468221,36467962,36467651,36467311,36466827	Gene ID= ENSG00000119535.17 TPM= 13.09 Transcript Type= NA
chr1	36466043	36476782	36466043	36476782	-	transcript4288.chr1.nic@CSF3R	transcript4288.chr1.nic	protein_coding	36475377,36473764,36473435,36472517,36472238,36472066,36471433,36469652,36469156,36468075,36467822,36467558,36467230,36466043	36476782,36473887,36473622,36472686,36472391,36472139,36471646,36469840,36469257,36468221,36467962,36467651,36467311,36466827	Gene ID= ENSG00000119535.17 TPM= 34.6 Transcript Type= NA
chr1	36466043	36483278	36466043	36483278	-	ENST00000373106.5@CSF3R	ENST00000373106.5	protein_coding	36482811,36481478,36479433,36475377,36473764,36473435,36472517,36472238,36472066,36471433,36469652,36469156,36468075,36467822,36467558,36467230,36466043	36483278,36481537,36479516,36475673,36473887,36473622,36472686,36472391,36472139,36471646,36469840,36469257,36468221,36467962,36467651,36467311,36466827	Gene ID= ENSG00000119535.17 TPM= 133.06 Transcript Type= protein_coding
chr1	37454881	37474411	37454881	37474411	-	transcript4321.chr1.nnic@LINC01137	transcript4321.chr1.nnic	antisense_RNA	37474144,37454881	37474411,37455912	Gene ID= ENSG00000233621.1 TPM= 2.34 Transcript Type= NA
chr1	37454879	37474411	37454879	37474411	-	ENST00000424989.1@LINC01137	ENST00000424989.1	antisense_RNA	37474144,37456367,37454879	37474411,37456459,37455912	Gene ID= ENSG00000233621.1 TPM= 11.68 Transcript Type= antisense_RNA
chr1	37474582	37484360	37474582	37484360	+	transcript4324.chr1.nic@ZC3H12A	transcript4324.chr1.nic	protein_coding	37474582,37475459,37480290,37481601,37482737	37474629,37475939,37480429,37482540,37484360	Gene ID= ENSG00000163874.10 TPM= 3.5 Transcript Type= NA
chr1	37474552	37484379	37474552	37484379	+	ENST00000373087.6@ZC3H12A	ENST00000373087.6	protein_coding	37474552,37475459,37480290,37481601,37482434,37482737	37474629,37475939,37480429,37481835,37482540,37484379	Gene ID= ENSG00000163874.10 TPM= 32.69 Transcript Type= protein_coding
chr1	37474580	37484360	37474580	37484360	+	ENST00000640233.1@ZC3H12A	ENST00000640233.1	protein_coding	37474580,37475459,37480290,37481601,37482350,37482737	37474629,37475939,37480429,37481835,37482540,37484360	Gene ID= ENSG00000163874.10 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr1	37492575	37514763	37492575	37514763	-	ENST00000373075.6@MEAF6	ENST00000373075.6	protein_coding	37514657,37513423,37509455,37509278,37501804,37496707,37495885,37492575	37514763,37513538,37509542,37509323,37501996,37496736,37495918,37494107	Gene ID= ENSG00000163875.15 TPM= 11.68 Transcript Type= protein_coding
chr1	37493178	37514774	37493178	37514774	-	ENST00000296214.9@MEAF6	ENST00000296214.9	protein_coding	37514657,37513423,37509455,37509278,37501804,37495885,37493178	37514774,37513538,37509542,37509323,37501996,37495918,37494107	Gene ID= ENSG00000163875.15 TPM= 36.2 Transcript Type= protein_coding
chr1	37493335	37514756	37493335	37514756	-	ENST00000475828.5@MEAF6	ENST00000475828.5	protein_coding	37514657,37513423,37509455,37509278,37501804,37496547,37495885,37493335	37514756,37513538,37509542,37509323,37501996,37496604,37495918,37494107	Gene ID= ENSG00000163875.15 TPM= 10.51 Transcript Type= processed_transcript
chr1	37534449	37554344	37534449	37554344	-	ENST00000296215.7@SNIP1	ENST00000296215.7	protein_coding	37554006,37552645,37540157,37534449	37554344,37552747,37540755,37538012	Gene ID= ENSG00000163877.10 TPM= 2.34 Transcript Type= protein_coding
chr1	37556919	37566857	37556919	37566857	+	ENST00000296218.7@DNALI1	ENST00000296218.7	protein_coding	37556919,37557603,37559327,37561557,37562081,37565026	37557075,37557748,37559496,37561735,37562245,37566857	Gene ID= ENSG00000163879.10 TPM= 12.84 Transcript Type= protein_coding
chr1	37566821	37595952	37566821	37595952	-	transcript4343.chr1.nnic@GNL2	transcript4343.chr1.nnic	protein_coding	37595759,37593762,37592712,37590706,37583867,37582778,37582223,37576428,37575595,37574665,37574343,37568851,37568275,37567673,37566821	37595952,37593846,37592806,37590845,37583933,37582936,37582336,37576556,37575699,37574823,37574456,37569302,37568357,37567764,37567007	Gene ID= ENSG00000134697.12 TPM= 2.34 Transcript Type= NA
chr1	37566816	37595921	37566816	37595921	-	ENST00000373062.7@GNL2	ENST00000373062.7	protein_coding	37595759,37593762,37592712,37590706,37587311,37583867,37582778,37582223,37576428,37575595,37574665,37574343,37568851,37568275,37567673,37566816	37595921,37593846,37592806,37590845,37587495,37583933,37582936,37582336,37576556,37575699,37574823,37574456,37569302,37568357,37567764,37567007	Gene ID= ENSG00000134697.12 TPM= 37.36 Transcript Type= protein_coding
chr1	37611639	37634923	37611639	37634923	-	ENST00000356545.6@RSPO1	ENST00000356545.6	protein_coding	37634566,37632287,37629568,37616484,37614184,37613704,37611639	37634923,37632353,37629949,37616675,37614333,37613892,37612921	Gene ID= ENSG00000169218.13 TPM= 10.51 Transcript Type= protein_coding
chr1	37681570	37690981	37681570	37690981	-	transcript4363.chr1.nic@C1orf109	transcript4363.chr1.nic	protein_coding	37690002,37689606,37686273,37683319,37681570	37690981,37689883,37686452,37683437,37683160	Gene ID= ENSG00000116922.14 TPM= 4.67 Transcript Type= NA
chr1	37681570	37690520	37681570	37690520	-	ENST00000358011.8@C1orf109	ENST00000358011.8	protein_coding	37690334,37689606,37686273,37683319,37681570	37690520,37689883,37686452,37683437,37683160	Gene ID= ENSG00000116922.14 TPM= 4.67 Transcript Type= protein_coding
chr1	37692418	37709719	37692418	37709719	+	ENST00000373055.5@CDCA8	ENST00000373055.5	protein_coding	37692418,37692905,37695910,37698905,37700436,37701754,37703252,37705441,37706978,37708322	37692784,37693033,37695950,37698977,37700521,37701818,37703347,37705567,37707064,37709719	Gene ID= ENSG00000134690.10 TPM= 3.5 Transcript Type= protein_coding
chr1	37793802	37801133	37793802	37801133	+	ENST00000373045.10@MANEAL	ENST00000373045.10	protein_coding	37793802,37795737,37796744,37799567	37794732,37795846,37796820,37801133	Gene ID= ENSG00000185090.14 TPM= 15.76 Transcript Type= protein_coding
chr1	37793883	37801133	37793883	37801133	+	ENST00000397631.7@MANEAL	ENST00000397631.7	protein_coding	37793883,37795737,37796744,37799844	37794732,37795846,37796820,37801133	Gene ID= ENSG00000185090.14 TPM= 1.75 Transcript Type= protein_coding
chr1	37802945	37808211	37802945	37808211	-	transcript4380.chr1.nic@YRDC	transcript4380.chr1.nic	protein_coding	37807792,37807101,37806857,37802945	37808211,37807215,37806976,37804444	Gene ID= ENSG00000196449.3 TPM= 2.34 Transcript Type= NA
chr1	37802944	37808185	37802944	37808185	-	ENST00000373044.2@YRDC	ENST00000373044.2	protein_coding	37807792,37807101,37806857,37804302,37802944	37808185,37807215,37806976,37804444,37803997	Gene ID= ENSG00000196449.3 TPM= 44.37 Transcript Type= protein_coding
chr1	37808146	37809454	37808146	37809454	+	ENST00000373042.4@C1orf122	ENST00000373042.4	protein_coding	37808146,37808531,37808978	37808439,37808732,37809454	Gene ID= ENSG00000197982.13 TPM= 17.51 Transcript Type= protein_coding
chr1	37806979	37809452	37806979	37809452	+	ENST00000373043.1@C1orf122	ENST00000373043.1	protein_coding	37806979,37808978	37808732,37809452	Gene ID= ENSG00000197982.13 TPM= 11.68 Transcript Type= protein_coding
chr1	37807747	37809449	37807747	37809449	+	ENST00000468084.1@C1orf122	ENST00000468084.1	protein_coding	37807747,37808531,37808978	37808306,37808732,37809449	Gene ID= ENSG00000197982.13 TPM= 39.7 Transcript Type= protein_coding
chr1	37809567	37859620	37809567	37859620	-	ENST00000373036.4@MTF1	ENST00000373036.4	protein_coding	37859531,37857251,37839920,37838625,37835671,37835079,37832245,37823710,37822121,37817419,37809567	37859620,37857709,37840158,37838756,37835744,37835215,37832322,37823812,37822716,37817482,37815566	Gene ID= ENSG00000188786.9 TPM= 9.34 Transcript Type= protein_coding
chr1	37862085	37947051	37862085	37947051	-	ENST00000373024.7@INPP5B	ENST00000373024.7	protein_coding	37946990,37946252,37945756,37943796,37943640,37940688,37931913,37891358,37889557,37888243,37887351,37886888,37885638,37882807,37880085,37878188,37875606,37873993,37872930,37868501,37866459,37865761,37864312,37862085	37947051,37946334,37945850,37943893,37943669,37940798,37932053,37891454,37889724,37888344,37887465,37887004,37885825,37882918,37880194,37878323,37875716,37874155,37873165,37868614,37866543,37865888,37864423,37862430	Gene ID= ENSG00000204084.12 TPM= 3.5 Transcript Type= protein_coding
chr1	37860697	37947057	37860697	37947057	-	ENST00000373023.6@INPP5B	ENST00000373023.6	protein_coding	37946990,37946252,37945756,37943796,37943640,37940688,37931673,37891358,37889557,37888243,37887351,37886888,37885638,37882807,37880085,37878188,37875606,37873993,37872930,37868501,37866459,37865761,37864312,37860697	37947057,37946334,37945850,37943893,37943669,37940798,37932053,37891454,37889724,37888344,37887465,37887004,37885825,37882918,37880194,37878323,37875716,37874155,37873165,37868614,37866543,37865888,37864423,37862430	Gene ID= ENSG00000204084.12 TPM= 28.02 Transcript Type= protein_coding
chr1	37956975	37990921	37956975	37990921	-	ENST00000373019.4@SF3A3	ENST00000373019.4	protein_coding	37989870,37989548,37987784,37987573,37984707,37984169,37981729,37980586,37979465,37978988,37978720,37976884,37969571,37969354,37968044,37960120,37956975	37990921,37989595,37987836,37987678,37984779,37984260,37981811,37980724,37979533,37979055,37978827,37976953,37969735,37969464,37968134,37960175,37958263	Gene ID= ENSG00000183431.11 TPM= 77.06 Transcript Type= protein_coding
chr1	37996770	38005505	37996770	38005505	-	ENST00000373016.3@FHL3	ENST00000373016.3	protein_coding	38005357,37999257,37998974,37997963,37997684,37996770	38005505,37999432,37999148,37998132,37997870,37997559	Gene ID= ENSG00000183386.9 TPM= 18.68 Transcript Type= protein_coding
chr1	38012708	38024824	38012708	38024824	+	transcript4423.chr1.nic@UTP11	transcript4423.chr1.nic	protein_coding	38012708,38016359,38017668,38018464,38019059,38022699,38023545	38012865,38016420,38017770,38018577,38019383,38022809,38024824	Gene ID= ENSG00000183520.11 TPM= 2.34 Transcript Type= NA
chr1	38012742	38024824	38012742	38024824	+	ENST00000373014.4@UTP11	ENST00000373014.4	protein_coding	38012742,38016359,38017668,38018464,38019059,38019253,38022699,38023545	38012865,38016420,38017770,38018577,38019152,38019383,38022809,38024824	Gene ID= ENSG00000183520.11 TPM= 31.53 Transcript Type= protein_coding
chr1	38838198	38859823	38838198	38859823	-	ENST00000373001.3@RRAGC	ENST00000373001.3	protein_coding	38859410,38856879,38855708,38852374,38851615,38845939,38838198	38859823,38857082,38855907,38852488,38851757,38846087,38839704	Gene ID= ENSG00000116954.7 TPM= 46.7 Transcript Type= protein_coding
chr1	38862964	38874105	38862964	38874105	-	ENST00000397572.4@MYCBP	ENST00000397572.4	protein_coding	38873291,38873018,38867562,38866880,38862964	38874105,38873090,38867610,38867009,38864714	Gene ID= ENSG00000214114.8 TPM= 17.51 Transcript Type= protein_coding
chr1	38885807	38941784	38885807	38941784	-	ENST00000372990.5@RHBDL2	ENST00000372990.5	protein_coding	38941682,38918967,38915562,38911322,38895969,38893164,38887963,38885807	38941784,38919337,38915710,38911434,38896069,38893224,38888024,38886683	Gene ID= ENSG00000158315.10 TPM= 1.17 Transcript Type= protein_coding
chr1	38991223	39006059	38991223	39006059	+	ENST00000432648.7@AKIRIN1	ENST00000432648.7	protein_coding	38991223,38998171,39000972,39003347,39004045	38991600,38998311,39001106,39003418,39006059	Gene ID= ENSG00000174574.15 TPM= 51.37 Transcript Type= protein_coding
chr1	39026318	39034636	39026318	39034636	+	ENST00000372969.7@NDUFS5	ENST00000372969.7	protein_coding	39026318,39028723,39034392	39026402,39028940,39034636	Gene ID= ENSG00000168653.10 TPM= 40.28 Transcript Type= protein_coding
chr1	39026318	39034636	39026318	39034636	+	ENST00000372967.3@NDUFS5	ENST00000372967.3	protein_coding	39026318,39028723,39034392	39026398,39028940,39034636	Gene ID= ENSG00000168653.10 TPM= 29.77 Transcript Type= protein_coding
chr1	39105429	39254648	39105429	39254648	+	ENST00000467673.5@MACF1	ENST00000467673.5	protein_coding	39105429,39231182,39250014,39254298	39105717,39231243,39250103,39254648	Gene ID= ENSG00000127603.24 TPM= 1.17 Transcript Type= retained_intron
chr1	39331138	39486987	39331138	39486987	+	ENST00000289893.8@MACF1	ENST00000289893.8	protein_coding	39331138,39337182,39340502,39340804,39346977,39349478,39350785,39353007,39357375,39358697,39359141,39360793,39361360,39368148,39370030,39372479,39378461,39379203,39380244,39381953,39385434,39387187,39422374,39422730,39424028,39427455,39427961,39429242,39429827,39430702,39432535,39433048,39434414,39435558,39436482,39437777,39439274,39441003,39441224,39441952,39442147,39442412,39442714,39443446,39444662,39447432,39447692,39448033,39448594,39451052,39452156,39452684,39453707,39454909,39458370,39459086,39460632,39461883,39463612,39465095,39468615,39479798,39484601,39485538	39336653,39337331,39340717,39340953,39347210,39349627,39351018,39353231,39357893,39358873,39359264,39361001,39361677,39368314,39370186,39372596,39378523,39379444,39380373,39382152,39385929,39388658,39422535,39422900,39424194,39427614,39428287,39429326,39430068,39430908,39432654,39433155,39434632,39435761,39436490,39438008,39439500,39441125,39441325,39442053,39442320,39442567,39442911,39443574,39444835,39447587,39447898,39448152,39448763,39451211,39452350,39452812,39453850,39455097,39458490,39459249,39460794,39462037,39463686,39465112,39468732,39480009,39484730,39486987	Gene ID= ENSG00000127603.24 TPM= 80.56 Transcript Type= protein_coding
chr1	39122257	39128023	39122257	39128023	-	transcript4464.chr1.nnic@NA	transcript4464.chr1.nnic	NA	39122257	39128023	Gene ID= novel_gene_chr1_4465 TPM= 2.34 Transcript Type= NA
chr1	39262344	39263589	39262344	39263589	-	transcript4466.chr1.nnic@NA	transcript4466.chr1.nnic	NA	39262344	39263589	Gene ID= novel_gene_chr1_4467 TPM= 3.5 Transcript Type= NA
chr1	39522280	39559691	39522280	39559691	-	transcript4472.chr1.nnic@AL365277.1	transcript4472.chr1.nnic	antisense_RNA	39559634,39559216,39556599,39554349,39553118,39545733,39541720,39529055,39522280	39559691,39559365,39556738,39554392,39553144,39548951,39541841,39529164,39522505	Gene ID= ENSG00000182109.7 TPM= 3.5 Transcript Type= NA
chr1	39560816	39576751	39560816	39576751	-	ENST00000372856.7@PABPC4	ENST00000372856.7	protein_coding	39575759,39572393,39571234,39569863,39569595,39568802,39567751,39565106,39564686,39564423,39563614,39562323,39562073,39561685,39560816	39576751,39572586,39571349,39570002,39569689,39568939,39567846,39565378,39564773,39564542,39563741,39562416,39562203,39561787,39561122	Gene ID= ENSG00000090621.13 TPM= 3.89 Transcript Type= protein_coding
chr1	39560816	39576401	39560816	39576401	-	ENST00000372858.7@PABPC4	ENST00000372858.7	protein_coding	39575759,39572393,39571234,39569863,39569595,39568802,39567751,39565106,39564686,39564423,39563836,39563614,39562323,39562073,39561685,39560816	39576401,39572586,39571349,39570002,39569689,39568939,39567846,39565378,39564773,39564542,39563922,39563741,39562416,39562203,39561787,39561122	Gene ID= ENSG00000090621.13 TPM= 19.65 Transcript Type= protein_coding
chr1	39560816	39576744	39560816	39576744	-	ENST00000372857.7@PABPC4	ENST00000372857.7	protein_coding	39575759,39572393,39571234,39569863,39569595,39568802,39567751,39565106,39564686,39564471,39563836,39563614,39562323,39562073,39561685,39560816	39576744,39572586,39571349,39570002,39569689,39568939,39567846,39565378,39564773,39564542,39563922,39563741,39562416,39562203,39561787,39561122	Gene ID= ENSG00000090621.13 TPM= 11.48 Transcript Type= protein_coding
chr1	39576675	39576887	39576675	39576887	-	transcript4485.chr1.nnic@NA	transcript4485.chr1.nnic	NA	39576675	39576887	Gene ID= novel_gene_chr1_4486 TPM= 4.67 Transcript Type= NA
chr1	39624153	39632984	39624153	39632984	-	transcript4490.chr1.nnic@HEYL	transcript4490.chr1.nnic	protein_coding	39632912,39632649,39631496,39630227,39624153	39632984,39632715,39631579,39630308,39627180	Gene ID= ENSG00000163909.7 TPM= 3.5 Transcript Type= NA
chr1	39624153	39639945	39624153	39639945	-	ENST00000372852.3@HEYL	ENST00000372852.3	protein_coding	39639546,39632649,39631496,39630227,39624153	39639945,39632715,39631579,39630308,39627180	Gene ID= ENSG00000163909.7 TPM= 63.05 Transcript Type= protein_coding
chr1	39738882	39753707	39738882	39753707	+	ENST00000324379.9@PPIE	ENST00000324379.9	protein_coding	39738882,39740165,39741366,39741895,39743216,39743824,39745375,39748903,39752910,39753287	39738931,39740263,39741409,39741921,39743297,39743924,39745498,39749088,39753052,39753707	Gene ID= ENSG00000084072.16 TPM= 79.4 Transcript Type= protein_coding
chr1	39738885	39763914	39738885	39763914	+	ENST00000356511.6@PPIE	ENST00000356511.6	protein_coding	39738885,39740165,39741366,39741895,39743216,39743824,39745375,39748903,39752910,39763689	39738931,39740263,39741409,39741921,39743297,39743924,39745498,39749088,39753052,39763914	Gene ID= ENSG00000084072.16 TPM= 11.68 Transcript Type= protein_coding
chr1	39738901	39763914	39738901	39763914	+	ENST00000372830.5@PPIE	ENST00000372830.5	protein_coding	39738901,39740165,39741366,39741895,39743216,39743824,39745375,39748903,39752910,39762517,39763689	39738931,39740263,39741409,39741921,39743297,39743924,39745498,39749088,39753052,39762651,39763914	Gene ID= ENSG00000084072.16 TPM= 2.34 Transcript Type= protein_coding
chr1	39738908	39753716	39738908	39753716	+	ENST00000475350.5@PPIE	ENST00000475350.5	protein_coding	39738908,39740165,39741366,39741895,39743216,39743824,39745414,39748903,39752910,39753287	39738923,39740263,39741409,39741921,39743297,39743924,39745498,39749088,39753052,39753716	Gene ID= ENSG00000084072.16 TPM= 5.84 Transcript Type= nonsense_mediated_decay
chr1	39757182	39788861	39757182	39788861	-	ENST00000372827.7@BMP8B	ENST00000372827.7	protein_coding	39788152,39774849,39774308,39764623,39763712,39763092,39757182	39788861,39775038,39774456,39764817,39763791,39763202,39760568	Gene ID= ENSG00000116985.11 TPM= 2.34 Transcript Type= protein_coding
chr1	39788976	39790171	39788976	39790171	+	ENST00000566366.1@AL033527.3	ENST00000566366.1	antisense_RNA	39788976	39790171	Gene ID= ENSG00000261798.1 TPM= 2.34 Transcript Type= antisense_RNA
chr1	39841051	39883520	39841051	39883520	-	transcript4516.chr1.nic@TRIT1	transcript4516.chr1.nic	protein_coding	39883318,39857277,39853970,39850119,39847986,39847548,39847220,39844531,39844101,39841051	39883520,39857417,39854068,39850261,39848097,39847660,39847297,39844640,39844218,39841913	Gene ID= ENSG00000043514.15 TPM= 2.34 Transcript Type= NA
chr1	39841051	39883506	39841051	39883506	-	ENST00000316891.9@TRIT1	ENST00000316891.9	protein_coding	39883318,39857277,39853970,39852731,39850119,39847986,39847548,39847220,39844531,39844101,39841051	39883506,39857417,39854068,39852876,39850261,39848097,39847660,39847297,39844640,39844218,39841913	Gene ID= ENSG00000043514.15 TPM= 11.68 Transcript Type= protein_coding
chr1	39895426	39902013	39895426	39902013	-	ENST00000397332.2@MYCL	ENST00000397332.2	protein_coding	39901808,39900939,39895426	39902013,39901443,39897970	Gene ID= ENSG00000116990.10 TPM= 4.67 Transcript Type= protein_coding
chr1	39955142	39969966	39955142	39969966	+	transcript4545.chr1.nic@MFSD2A	transcript4545.chr1.nic	protein_coding	39955142,39957087,39958701,39965211,39965471,39965857,39967086,39967628,39967804,39968334,39968569,39969505	39955385,39957221,39958825,39965334,39965549,39966932,39967169,39967711,39967916,39968477,39968745,39969966	Gene ID= ENSG00000168389.17 TPM= 14.49 Transcript Type= NA
chr1	39955130	39969966	39955130	39969966	+	ENST00000372811.9@MFSD2A	ENST00000372811.9	protein_coding	39955130,39957087,39958701,39965211,39965471,39965857,39966601,39966811,39967086,39967628,39967804,39968334,39968569,39969505	39955385,39957221,39958825,39965334,39965549,39966014,39966691,39966932,39967169,39967711,39967916,39968477,39968745,39969966	Gene ID= ENSG00000168389.17 TPM= 320.4 Transcript Type= protein_coding
chr1	39955148	39956943	39955148	39956943	+	transcript4558.chr1.nnic@NA	transcript4558.chr1.nnic	NA	39955148	39956943	Gene ID= novel_gene_chr1_4559 TPM= 36.2 Transcript Type= NA
chr1	39959252	39961321	39959252	39961321	-	transcript4562.chr1.nnic@NA	transcript4562.chr1.nnic	NA	39959252	39961321	Gene ID= novel_gene_chr1_4563 TPM= 3.5 Transcript Type= NA
chr1	39966680	39971614	39966680	39971614	+	transcript4560.chr1.nnic@NA	transcript4560.chr1.nnic	NA	39966680	39971614	Gene ID= novel_gene_chr1_4561 TPM= 3.5 Transcript Type= NA
chr1	39967539	39969955	39967539	39969955	+	transcript4556.chr1.nnic@NA	transcript4556.chr1.nnic	NA	39967539	39969955	Gene ID= novel_gene_chr1_4557 TPM= 12.84 Transcript Type= NA
chr1	40040233	40072649	40040233	40072649	+	ENST00000372797.7@CAP1	ENST00000372797.7	protein_coding	40040233,40059337,40060067,40061735,40064227,40064474,40066215,40067540,40069690,40070159,40070430,40070836,40071450	40040783,40059458,40060170,40061812,40064370,40064559,40066320,40067717,40069874,40070282,40070512,40070979,40072649	Gene ID= ENSG00000131236.16 TPM= 501.31 Transcript Type= protein_coding
chr1	40040761	40072271	40040761	40072271	+	ENST00000372805.7@CAP1	ENST00000372805.7	protein_coding	40040761,40059337,40060067,40061735,40064227,40064474,40066215,40067540,40069690,40070159,40070430,40070836,40071450	40040801,40059458,40060170,40061812,40064370,40064559,40066320,40067717,40069874,40070282,40070512,40070979,40072271	Gene ID= ENSG00000131236.16 TPM= 137.78 Transcript Type= protein_coding
chr1	40071461	40097727	40071461	40097727	-	ENST00000642050.1@PPT1	ENST00000642050.1	protein_coding	40097115,40092398,40092045,40091329,40089410,40080397,40078560,40076842,40071461	40097727,40092507,40092172,40091399,40089512,40080487,40078658,40076913,40074183	Gene ID= ENSG00000131238.17 TPM= 386.47 Transcript Type= protein_coding
chr1	40072726	40097252	40072726	40097252	-	ENST00000433473.8@PPT1	ENST00000433473.8	protein_coding	40097115,40092398,40092045,40091329,40089410,40080397,40078560,40076842,40072726	40097252,40092504,40092172,40091399,40089512,40080487,40078658,40076913,40074183	Gene ID= ENSG00000131238.17 TPM= 368.96 Transcript Type= protein_coding
chr1	40072729	40097252	40072729	40097252	-	ENST00000439754.6@PPT1	ENST00000439754.6	protein_coding	40097115,40092398,40092045,40091329,40089410,40080397,40078560,40072729	40097252,40092507,40092172,40091399,40089512,40080487,40078658,40074183	Gene ID= ENSG00000131238.17 TPM= 21.02 Transcript Type= protein_coding
chr1	40072726	40097252	40072726	40097252	-	ENST00000530704.6@PPT1	ENST00000530704.6	protein_coding	40097115,40092398,40092045,40091329,40089410,40080397,40078560,40076842,40072726	40097252,40092507,40092172,40091399,40089582,40080487,40078658,40076913,40074183	Gene ID= ENSG00000131238.17 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr1	40072710	40097247	40072710	40097247	-	ENST00000641471.1@PPT1	ENST00000641471.1	protein_coding	40097115,40093933,40092398,40092045,40091329,40089410,40080397,40078560,40076842,40072710	40097247,40094019,40092507,40092172,40091399,40089512,40080487,40078658,40076913,40074183	Gene ID= ENSG00000131238.17 TPM= 12.84 Transcript Type= protein_coding
chr1	40086163	40089293	40086163	40089293	+	transcript4594.chr1.nnic@NA	transcript4594.chr1.nnic	NA	40086163	40089293	Gene ID= novel_gene_chr1_4595 TPM= 2.34 Transcript Type= NA
chr1	40161373	40240921	40161373	40240921	+	ENST00000372771.4@RLF	ENST00000372771.4	protein_coding	40161373,40189055,40190772,40195632,40202412,40222574,40231517,40235792	40161636,40189209,40190853,40195764,40202614,40222710,40231658,40240921	Gene ID= ENSG00000117000.8 TPM= 10.51 Transcript Type= protein_coding
chr1	40161379	40191553	40161379	40191553	+	transcript4603.chr1.nic@RLF	transcript4603.chr1.nic	protein_coding	40161379,40189055	40161636,40191553	Gene ID= ENSG00000117000.8 TPM= 2.34 Transcript Type= NA
chr1	40256427	40257967	40256427	40257967	-	ENST00000567508.1@AL050341.2	ENST00000567508.1	antisense_RNA	40256427	40257967	Gene ID= ENSG00000259943.1 TPM= 10.51 Transcript Type= antisense_RNA
chr1	40258107	40294184	40258107	40294184	+	ENST00000372759.3@ZMPSTE24	ENST00000372759.3	protein_coding	40258107,40260839,40267786,40268419,40269975,40271894,40281343,40285925,40290854,40292445	40258394,40260985,40267872,40268535,40270127,40272035,40281527,40286029,40290997,40294184	Gene ID= ENSG00000084073.8 TPM= 91.07 Transcript Type= protein_coding
chr1	40300487	40312633	40300487	40312633	-	transcript4616.chr1.nic@COL9A2	transcript4616.chr1.nic	protein_coding	40312574,40312456,40312059,40311662,40311500,40311230,40311093,40310714,40310264,40310111,40309938,40308192,40307703,40307446,40306143,40305715,40304794,40304476,40304320,40304064,40303928,40303807,40303530,40303131,40302621,40301812,40300487	40312633,40312479,40312112,40311715,40311547,40311286,40311146,40310767,40310317,40310164,40309991,40308245,40307756,40307499,40306187,40305768,40304847,40304529,40304391,40304099,40303972,40303839,40303676,40303185,40302809,40301889,40301381	Gene ID= ENSG00000049089.13 TPM= 19.07 Transcript Type= NA
chr1	40300487	40312633	40300487	40312633	-	transcript4618.chr1.nnic@COL9A2	transcript4618.chr1.nnic	protein_coding	40312574,40312456,40312059,40311662,40311488,40311230,40311093,40310714,40310264,40310111,40309938,40308192,40307703,40307446,40306143,40305715,40304476,40304320,40304064,40303928,40303807,40303530,40303131,40302621,40301812,40300487	40312633,40312479,40312112,40311715,40311547,40311286,40311146,40310767,40310317,40310164,40309991,40308245,40307756,40307499,40306187,40305768,40304847,40304391,40304099,40303972,40303839,40303676,40303185,40302809,40301889,40301381	Gene ID= ENSG00000049089.13 TPM= 3.89 Transcript Type= NA
chr1	40373697	40423326	40373697	40423326	+	ENST00000372718.7@SMAP2	ENST00000372718.7	protein_coding	40373697,40406736,40408653,40409757,40413016,40414159,40415272,40416176,40416780,40421976	40374223,40406869,40408738,40409835,40413102,40414240,40415381,40416341,40417096,40423326	Gene ID= ENSG00000084070.11 TPM= 147.41 Transcript Type= protein_coding
chr1	40374648	40423326	40374648	40423326	+	ENST00000372708.5@SMAP2	ENST00000372708.5	protein_coding	40374648,40406736,40408653,40409757,40413016,40414159,40415272,40416176,40416780,40421976	40374708,40406869,40408738,40409835,40413102,40414240,40415381,40416341,40417096,40423326	Gene ID= ENSG00000084070.11 TPM= 4.96 Transcript Type= protein_coding
chr1	40450107	40463680	40450107	40463680	+	ENST00000484445.5@ZFP69B	ENST00000484445.5	protein_coding	40450107,40450665,40456945,40457344,40462421	40450175,40451088,40457071,40457439,40463680	Gene ID= ENSG00000187801.14 TPM= 1.17 Transcript Type= protein_coding
chr1	40477215	40496343	40477215	40496343	+	ENST00000372706.5@ZFP69	ENST00000372706.5	protein_coding	40477215,40479036,40481763,40489088,40489529,40494921	40477894,40479488,40481854,40489214,40489624,40496343	Gene ID= ENSG00000187815.9 TPM= 4.67 Transcript Type= protein_coding
chr1	40477272	40496288	40477272	40496288	+	transcript4643.chr1.nnic@ZFP69	transcript4643.chr1.nnic	protein_coding	40477272,40479210,40481763,40489088,40489529,40494921	40477894,40479488,40481854,40489214,40489624,40496288	Gene ID= ENSG00000187815.9 TPM= 2.34 Transcript Type= NA
chr1	40508750	40516036	40508750	40516036	+	transcript4649.chr1.nnic@EXO5	transcript4649.chr1.nnic	protein_coding	40508750,40509451,40509733,40514515	40509349,40509625,40509790,40516036	Gene ID= ENSG00000164002.11 TPM= 3.5 Transcript Type= NA
chr1	40508741	40516036	40508741	40516036	+	ENST00000358527.6@EXO5	ENST00000358527.6	protein_coding	40508741,40509451,40509733,40514515	40508877,40509625,40509790,40516036	Gene ID= ENSG00000164002.11 TPM= 1.17 Transcript Type= protein_coding
chr1	40508747	40516037	40508747	40516037	+	ENST00000372703.1@EXO5	ENST00000372703.1	protein_coding	40508747,40514515	40509790,40516037	Gene ID= ENSG00000164002.11 TPM= 1.17 Transcript Type= protein_coding
chr1	40531561	40548169	40531561	40548169	+	ENST00000372699.7@ZNF684	ENST00000372699.7	protein_coding	40531561,40533143,40540586,40541615,40546562	40531787,40533181,40540712,40541710,40548169	Gene ID= ENSG00000117010.15 TPM= 3.5 Transcript Type= protein_coding
chr1	40691592	40771603	40691592	40771603	+	transcript4673.chr1.nic@NFYC	transcript4673.chr1.nic	protein_coding	40691592,40738836,40747534,40749573,40753151,40758121,40762888,40766596,40769356,40770397	40691867,40738948,40747605,40749686,40753246,40758294,40763046,40766703,40769415,40771603	Gene ID= ENSG00000066136.20 TPM= 21.02 Transcript Type= NA
chr1	40747843	40751006	40747843	40751006	-	transcript4683.chr1.nnic@NA	transcript4683.chr1.nnic	NA	40747843	40751006	Gene ID= novel_gene_chr1_4684 TPM= 4.67 Transcript Type= NA
chr1	40861051	40862366	40861051	40862366	-	ENST00000372638.3@CITED4	ENST00000372638.3	protein_coding	40861051	40862366	Gene ID= ENSG00000179862.6 TPM= 80.56 Transcript Type= protein_coding
chr1	40979335	41012565	40979335	41012565	+	ENST00000372621.8@CTPS1	ENST00000372621.8	protein_coding	40979335,40983278,40984821,40987372,40988594,40991165,40991765,40995917,40997394,41001029,41002160,41003114,41006051,41007449,41008659,41008794,41009445,41010161,41011658	40979829,40983456,40984991,40987472,40988710,40991248,40991845,40996068,40997526,41001117,41002254,41003176,41006094,41007545,41008714,41008890,41009589,41010254,41012565	Gene ID= ENSG00000171793.13 TPM= 44.95 Transcript Type= protein_coding
chr1	40982040	41012565	40982040	41012565	+	transcript4690.chr1.nnic@CTPS1	transcript4690.chr1.nnic	protein_coding	40982040,40983278,40984821,40987372,40988594,40991165,40991765,40995917,40997394,41001029,41002160,41003114,41006051,41007449,41008659,41008794,41009445,41010161,41011658	40982111,40983456,40984991,40987472,40988710,40991248,40991845,40996068,40997526,41001117,41002254,41003176,41006094,41007545,41008714,41008890,41009589,41010254,41012565	Gene ID= ENSG00000171793.13 TPM= 4.09 Transcript Type= NA
chr1	40979662	41012565	40979662	41012565	+	transcript4691.chr1.nic@CTPS1	transcript4691.chr1.nic	protein_coding	40979662,40983278,40984821,40987372,40988594,40991165,40991765,40995917,40997394,41001029,41002160,41003114,41006051,41007449,41008659,41009445,41010161,41011658	40979829,40983456,40984991,40987472,40988710,40991248,40991845,40996068,40997526,41001117,41002254,41003176,41006094,41007545,41008890,41009589,41010254,41012565	Gene ID= ENSG00000171793.13 TPM= 2.92 Transcript Type= NA
chr1	40979662	41012565	40979662	41012565	+	transcript4692.chr1.nic@CTPS1	transcript4692.chr1.nic	protein_coding	40979662,40983278,40984821,40987372,40988594,40991165,40991765,40995917,40997394,41001029,41002160,41003114,41006051,41008659,41008794,41009445,41010161,41011658	40979829,40983456,40984991,40987472,40988710,40991248,40991845,40996068,40997526,41001117,41002254,41003176,41006094,41008714,41008890,41009589,41010254,41012565	Gene ID= ENSG00000171793.13 TPM= 2.92 Transcript Type= NA
chr1	41027202	41242323	41027202	41242323	-	transcript4698.chr1.nic@SCMH1	transcript4698.chr1.nic	protein_coding	41242059,41186121,41161364,41160875,41159725,41152599,41151614,41142878,41116922,41113283,41075219,41070595,41048690,41046407,41037362,41033983,41028584,41027202	41242323,41186250,41161432,41160898,41159933,41152741,41151684,41143112,41117010,41113526,41075451,41070721,41048890,41046598,41037541,41034048,41028726,41028319	Gene ID= ENSG00000010803.16 TPM= 15.18 Transcript Type= NA
chr1	41027202	41242323	41027202	41242323	-	transcript4702.chr1.nic@SCMH1	transcript4702.chr1.nic	protein_coding	41242059,41186121,41161364,41160875,41159725,41152599,41151614,41142878,41116922,41113283,41075219,41070595,41048690,41046407,41037362,41028584,41027202	41242323,41186250,41161432,41160898,41159933,41152741,41151684,41143112,41117010,41113526,41075451,41070721,41048890,41046598,41037541,41028726,41028319	Gene ID= ENSG00000010803.16 TPM= 15.18 Transcript Type= NA
chr1	41506916	41509758	41506916	41509758	-	transcript4717.chr1.nnic@NA	transcript4717.chr1.nnic	NA	41506916	41509758	Gene ID= novel_gene_chr1_4718 TPM= 2.34 Transcript Type= NA
chr1	41510230	41579900	41510230	41579900	-	ENST00000460604.1@HIVEP3	ENST00000460604.1	protein_coding	41579737,41575544,41518402,41512816,41510230	41579900,41575689,41518488,41513750,41511266	Gene ID= ENSG00000127124.14 TPM= 3.5 Transcript Type= processed_transcript
chr1	41676062	41679613	41676062	41679613	-	transcript4720.chr1.nnic@NA	transcript4720.chr1.nnic	NA	41676062	41679613	Gene ID= novel_gene_chr1_4721 TPM= 2.34 Transcript Type= NA
chr1	41847191	42035954	41847191	42035954	-	transcript4723.chr1.nnic@HIVEP3	transcript4723.chr1.nnic	protein_coding	42035807,41918413,41848871,41847191	42035954,41918524,41849035,41848445	Gene ID= ENSG00000127124.14 TPM= 2.34 Transcript Type= NA
chr1	41847191	42035925	41847191	42035925	-	ENST00000489103.5@HIVEP3	ENST00000489103.5	protein_coding	42035807,41918413,41848871,41847191	42035925,41918524,41849089,41848445	Gene ID= ENSG00000127124.14 TPM= 3.5 Transcript Type= processed_transcript
chr1	42176545	42335211	42176545	42335211	-	transcript4731.chr1.nnic@FOXJ3	transcript4731.chr1.nnic	protein_coding	42335059,42311050,42278348,42265115,42227883,42205762,42199102,42194890,42191303,42189303,42188737,42181917,42176545	42335211,42311110,42278784,42265189,42227966,42205863,42199230,42195064,42191719,42189404,42188928,42182024,42179825	Gene ID= ENSG00000198815.8 TPM= 4.67 Transcript Type= NA
chr1	42193400	42335284	42193400	42335284	-	transcript4734.chr1.nic@FOXJ3	transcript4734.chr1.nic	protein_coding	42335059,42311050,42278348,42265115,42227883,42205762,42199102,42193400	42335284,42311110,42278672,42265189,42227966,42205863,42199230,42195064	Gene ID= ENSG00000198815.8 TPM= 2.34 Transcript Type= NA
chr1	42176545	42335232	42176545	42335232	-	ENST00000361346.5@FOXJ3	ENST00000361346.5	protein_coding	42335059,42311050,42278348,42265115,42227883,42205762,42199102,42194890,42191303,42189303,42188737,42181917,42176545	42335232,42311110,42278672,42265189,42227966,42205863,42199230,42195064,42191719,42189404,42188928,42182024,42179825	Gene ID= ENSG00000198815.8 TPM= 18.68 Transcript Type= protein_coding
chr1	42176545	42335215	42176545	42335215	-	ENST00000361776.5@FOXJ3	ENST00000361776.5	protein_coding	42335059,42311050,42278348,42265115,42227883,42199102,42194890,42191303,42189303,42188737,42181917,42176545	42335215,42311110,42278672,42265189,42227966,42199230,42195064,42191719,42189404,42188928,42182024,42179825	Gene ID= ENSG00000198815.8 TPM= 7.01 Transcript Type= protein_coding
chr1	42430329	42456267	42430329	42456267	-	ENST00000372565.7@ZMYND12	ENST00000372565.7	protein_coding	42455888,42449918,42448467,42439856,42436421,42435274,42433143,42430329	42456267,42450059,42448638,42440025,42436543,42435385,42433288,42430858	Gene ID= ENSG00000066185.12 TPM= 1.17 Transcript Type= protein_coding
chr1	42456559	42460414	42456559	42460414	+	ENST00000372561.3@PPCS	ENST00000372561.3	protein_coding	42456559,42457247,42459603	42457073,42457350,42460414	Gene ID= ENSG00000127125.8 TPM= 61.3 Transcript Type= protein_coding
chr1	42456561	42460414	42456561	42460414	+	ENST00000372556.3@PPCS	ENST00000372556.3	protein_coding	42456561,42457247,42459603	42456628,42457350,42460414	Gene ID= ENSG00000127125.8 TPM= 23.94 Transcript Type= protein_coding
chr1	42456544	42460412	42456544	42460412	+	ENST00000472013.1@PPCS	ENST00000472013.1	protein_coding	42456544,42459603	42457350,42460412	Gene ID= ENSG00000127125.8 TPM= 2.34 Transcript Type= processed_transcript
chr1	42456547	42460400	42456547	42460400	+	transcript4756.chr1.nnic@NA	transcript4756.chr1.nnic	NA	42456547	42460400	Gene ID= novel_gene_chr1_4757 TPM= 2.34 Transcript Type= NA
chr1	42459157	42463568	42459157	42463568	-	transcript4758.chr1.nnic@NA	transcript4758.chr1.nnic	NA	42459157	42463568	Gene ID= novel_gene_chr1_4759 TPM= 10.51 Transcript Type= NA
chr1	42658425	42676758	42658425	42676758	+	ENST00000304979.7@PPIH	ENST00000304979.7	protein_coding	42658425,42658844,42659228,42659522,42660862,42664863,42665980,42666547,42667351,42676584	42658512,42658908,42659251,42659566,42660904,42664955,42666067,42666587,42667440,42676758	Gene ID= ENSG00000171960.10 TPM= 5.84 Transcript Type= protein_coding
chr1	42682987	42702349	42682987	42702349	+	ENST00000436427.1@YBX1	ENST00000436427.1	protein_coding	42682987,42693490,42696199,42696642,42697180,42700781,42701981	42683365,42693523,42696288,42696944,42697262,42701046,42702349	Gene ID= ENSG00000065978.18 TPM= 13.43 Transcript Type= protein_coding
chr1	42682427	42702349	42682427	42702349	+	ENST00000321358.11@YBX1	ENST00000321358.11	protein_coding	42682427,42683403,42693490,42696199,42696642,42697180,42700781,42701981	42682731,42683466,42693523,42696288,42696944,42697262,42701046,42702349	Gene ID= ENSG00000065978.18 TPM= 188.57 Transcript Type= protein_coding
chr1	42746335	42767084	42746335	42767084	-	ENST00000397054.7@P3H1	ENST00000397054.7	protein_coding	42766507,42762323,42759201,42758852,42757783,42755548,42755165,42754869,42752537,42752274,42750186,42748200,42747723,42747253,42746335	42767084,42762475,42759390,42758983,42757922,42755637,42755217,42754990,42752664,42752369,42750336,42748317,42747798,42747412,42746852	Gene ID= ENSG00000117385.15 TPM= 4.9 Transcript Type= protein_coding
chr1	42746375	42767076	42746375	42767076	-	transcript4781.chr1.nic@P3H1	transcript4781.chr1.nic	protein_coding	42766507,42762323,42759201,42758852,42757783,42755548,42754869,42752537,42752274,42750186,42748200,42747723,42746375	42767076,42762475,42759390,42758983,42757922,42755637,42755217,42752664,42752369,42750336,42748317,42747798,42747412	Gene ID= ENSG00000117385.15 TPM= 2.57 Transcript Type= NA
chr1	42746375	42767023	42746375	42767023	-	ENST00000296388.9@P3H1	ENST00000296388.9	protein_coding	42766507,42762323,42759201,42758852,42757783,42755548,42755165,42754869,42752537,42752274,42750186,42748200,42747723,42747272,42746375	42767023,42762475,42759390,42758983,42757922,42755637,42755217,42754990,42752664,42752369,42750336,42748317,42747798,42747412,42746852	Gene ID= ENSG00000117385.15 TPM= 42.65 Transcript Type= protein_coding
chr1	42746374	42766989	42746374	42766989	-	ENST00000460031.5@P3H1	ENST00000460031.5	protein_coding	42766507,42762323,42759201,42758852,42757783,42755548,42754869,42752537,42752274,42750186,42748200,42747723,42747272,42746374	42766989,42762475,42759390,42758983,42757922,42755637,42755217,42752664,42752369,42750336,42748317,42747798,42747412,42746852	Gene ID= ENSG00000117385.15 TPM= 18.13 Transcript Type= retained_intron
chr1	42746375	42767022	42746375	42767022	-	ENST00000495874.5@P3H1	ENST00000495874.5	protein_coding	42766507,42762323,42759201,42758852,42757783,42756401,42755548,42754869,42752537,42752274,42750186,42748200,42747723,42747272,42746375	42767022,42762475,42759390,42758983,42757922,42756455,42755637,42755217,42752664,42752369,42750336,42748317,42747798,42747412,42746852	Gene ID= ENSG00000117385.15 TPM= 1.79 Transcript Type= retained_intron
chr1	42767269	42775747	42767269	42775747	+	ENST00000372525.5@C1orf50	ENST00000372525.5	protein_coding	42767269,42767509,42773563,42774737,42775209	42767390,42767624,42773649,42774868,42775747	Gene ID= ENSG00000164008.14 TPM= 4.67 Transcript Type= protein_coding
chr1	42807056	42817252	42807056	42817252	-	ENST00000372521.8@SVBP	ENST00000372521.8	protein_coding	42817190,42816431,42807056	42817252,42816580,42807500	Gene ID= ENSG00000177868.11 TPM= 2.34 Transcript Type= protein_coding
chr1	42817078	42844983	42817078	42844983	+	transcript4792.chr1.nic@ERMAP	transcript4792.chr1.nic	protein_coding	42817078,42825623,42830444,42835038,42835732,42837158,42838901,42840033,42840152,42840270,42842517	42817253,42825738,42831115,42835154,42835764,42837190,42838921,42840053,42840178,42840296,42844983	Gene ID= ENSG00000164010.13 TPM= 3.5 Transcript Type= NA
chr1	42817131	42844983	42817131	42844983	+	ENST00000372517.6@ERMAP	ENST00000372517.6	protein_coding	42817131,42825623,42830444,42830768,42835038,42835732,42837158,42838901,42840033,42840152,42840270,42842517	42817253,42825738,42830533,42831115,42835154,42835764,42837190,42838921,42840053,42840178,42840296,42844983	Gene ID= ENSG00000164010.13 TPM= 10.51 Transcript Type= protein_coding
chr1	42846573	42852473	42846573	42852473	+	ENST00000372502.5@ZNF691	ENST00000372502.5	protein_coding	42846573,42849291,42849565,42850950	42846657,42849413,42849742,42852473	Gene ID= ENSG00000164011.17 TPM= 8.17 Transcript Type= protein_coding
chr1	42846614	42852477	42846614	42852477	+	transcript4804.chr1.nic@ZNF691	transcript4804.chr1.nic	protein_coding	42846614,42849291,42850950	42846657,42849742,42852477	Gene ID= ENSG00000164011.17 TPM= 2.34 Transcript Type= NA
chr1	42846609	42852477	42846609	42852477	+	ENST00000372508.7@ZNF691	ENST00000372508.7	protein_coding	42846609,42850950	42846657,42852477	Gene ID= ENSG00000164011.17 TPM= 9.34 Transcript Type= protein_coding
chr1	42846626	42852477	42846626	42852477	+	ENST00000372507.5@ZNF691	ENST00000372507.5	protein_coding	42846626,42849291,42850950	42846657,42849413,42852477	Gene ID= ENSG00000164011.17 TPM= 3.5 Transcript Type= protein_coding
chr1	42846628	42852477	42846628	42852477	+	ENST00000372506.5@ZNF691	ENST00000372506.5	protein_coding	42846628,42849291,42849565,42850950	42846657,42849413,42849742,42852477	Gene ID= ENSG00000164011.17 TPM= 4.67 Transcript Type= protein_coding
chr1	42846637	42852477	42846637	42852477	+	ENST00000372504.5@ZNF691	ENST00000372504.5	protein_coding	42846637,42849291,42849565,42850659,42850950	42846657,42849413,42849742,42850743,42852477	Gene ID= ENSG00000164011.17 TPM= 1.17 Transcript Type= protein_coding
chr1	42925375	42959173	42925375	42959173	-	ENST00000426263.7@SLC2A1	ENST00000426263.7	protein_coding	42958634,42943226,42931046,42930626,42929873,42929593,42929210,42928932,42927605,42925375	42959173,42943321,42931206,42930866,42930035,42929780,42929314,42929033,42927808,42927241	Gene ID= ENSG00000117394.20 TPM= 1.17 Transcript Type= protein_coding
chr1	43164175	43172570	43164175	43172570	-	ENST00000431635.6@EBNA1BP2	ENST00000431635.6	protein_coding	43172280,43172053,43171886,43171479,43170756,43168939,43167160,43166826,43164643,43164175	43172570,43172141,43171969,43171651,43170879,43169028,43167235,43166919,43164805,43164493	Gene ID= ENSG00000117395.12 TPM= 1.17 Transcript Type= protein_coding
chr1	43164184	43172260	43164184	43172260	-	ENST00000236051.2@EBNA1BP2	ENST00000236051.2	protein_coding	43172053,43171886,43171479,43170756,43168939,43167160,43166826,43164643,43164184	43172260,43171969,43171651,43170879,43169028,43167235,43166919,43164805,43164493	Gene ID= ENSG00000117395.12 TPM= 4.67 Transcript Type= protein_coding
chr1	43269979	43274002	43269979	43274002	+	transcript4826.chr1.nnic@TMEM125	transcript4826.chr1.nnic	protein_coding	43269979,43270681,43272184,43272578	43270085,43271253,43272339,43274002	Gene ID= ENSG00000179178.10 TPM= 17.01 Transcript Type= NA
chr1	43269979	43274002	43269979	43274002	+	transcript4830.chr1.nnic@TMEM125	transcript4830.chr1.nnic	protein_coding	43269979,43270528,43272184,43272578	43270085,43270793,43272339,43274002	Gene ID= ENSG00000179178.10 TPM= 21.68 Transcript Type= NA
chr1	43269980	43274002	43269980	43274002	+	transcript4832.chr1.nic@TMEM125	transcript4832.chr1.nic	protein_coding	43269980,43270681,43272578	43270085,43272339,43274002	Gene ID= ENSG00000179178.10 TPM= 13.04 Transcript Type= NA
chr1	43269994	43274002	43269994	43274002	+	ENST00000439858.5@TMEM125	ENST00000439858.5	protein_coding	43269994,43270681,43272184,43272578	43270085,43270793,43272339,43274002	Gene ID= ENSG00000179178.10 TPM= 230.68 Transcript Type= protein_coding
chr1	43270025	43274002	43270025	43274002	+	ENST00000432792.6@TMEM125	ENST00000432792.6	protein_coding	43270025,43270586,43272184,43272578	43270085,43270793,43272339,43274002	Gene ID= ENSG00000179178.10 TPM= 39.2 Transcript Type= protein_coding
chr1	43281883	43285579	43281883	43285579	-	ENST00000523677.5@C1orf210	ENST00000523677.5	protein_coding	43285444,43283252,43281883	43285579,43283368,43283107	Gene ID= ENSG00000253313.5 TPM= 23.35 Transcript Type= protein_coding
chr1	43300991	43323108	43300991	43323108	+	transcript4848.chr1.nic@TIE1	transcript4848.chr1.nic	protein_coding	43300991,43304851,43305233,43306840,43307142,43307432,43308986,43309388,43311671,43311994,43312305,43313135,43313778,43317199,43317564,43317882,43319235,43319459,43321269,43321396,43321616,43322651	43301129,43305165,43305343,43306995,43307273,43307572,43309131,43309532,43311829,43312131,43312601,43313425,43313968,43317409,43317674,43318072,43319348,43319529,43321309,43321492,43321715,43323108	Gene ID= ENSG00000066056.13 TPM= 18.68 Transcript Type= NA
chr1	43300977	43315296	43300977	43315296	+	transcript4853.chr1.nic@TIE1	transcript4853.chr1.nic	protein_coding	43300977,43304851,43305233,43306840,43307142,43307432,43307796,43308986,43309388,43311671,43311994,43312305,43313135,43313778,43314383	43301129,43305165,43305343,43306995,43307273,43307572,43307924,43309131,43309532,43311829,43312131,43312601,43313425,43313968,43315296	Gene ID= ENSG00000066056.13 TPM= 12.84 Transcript Type= NA
chr1	43300993	43323108	43300993	43323108	+	ENST00000372476.7@TIE1	ENST00000372476.7	protein_coding	43300993,43304851,43305233,43306840,43307142,43307432,43307796,43308986,43309388,43311671,43311994,43312305,43313135,43313778,43317199,43317564,43317882,43319235,43319459,43321269,43321396,43321616,43322651	43301129,43305165,43305343,43306995,43307273,43307572,43307924,43309131,43309532,43311829,43312131,43312601,43313425,43313968,43317409,43317674,43318072,43319348,43319529,43321309,43321492,43321715,43323108	Gene ID= ENSG00000066056.13 TPM= 163.46 Transcript Type= protein_coding
chr1	43358955	43363203	43358955	43363203	+	ENST00000310955.10@CDC20	ENST00000310955.10	protein_coding	43358955,43359167,43359490,43359725,43359969,43360193,43360499,43360733,43361120,43362195,43362951	43359006,43359396,43359638,43359821,43360097,43360389,43360593,43360961,43361245,43362312,43363203	Gene ID= ENSG00000117399.13 TPM= 1.17 Transcript Type= protein_coding
chr1	43363398	43367738	43363398	43367738	-	ENST00000621943.4@ELOVL1	ENST00000621943.4	protein_coding	43367486,43365564,43365186,43364928,43364738,43364542,43364324,43363398	43367738,43365623,43365376,43365008,43364794,43364647,43364460,43364137	Gene ID= ENSG00000066322.14 TPM= 20.05 Transcript Type= protein_coding
chr1	43363397	43368018	43363397	43368018	-	ENST00000372458.7@ELOVL1	ENST00000372458.7	protein_coding	43367915,43365564,43365186,43364928,43364738,43364542,43364324,43363397	43368018,43365623,43365376,43365008,43364794,43364647,43364460,43364137	Gene ID= ENSG00000066322.14 TPM= 149.07 Transcript Type= protein_coding
chr1	43383917	43389808	43383917	43389808	-	ENST00000290663.10@MED8	ENST00000290663.10	protein_coding	43389759,43388310,43387503,43386858,43386589,43385978,43385046,43383917	43389808,43388428,43387647,43386998,43386670,43386226,43385106,43384552	Gene ID= ENSG00000159479.16 TPM= 2.34 Transcript Type= protein_coding
chr1	43383969	43389808	43383969	43389808	-	ENST00000372457.8@MED8	ENST00000372457.8	protein_coding	43389759,43388310,43387503,43386858,43386589,43385978,43383969	43389808,43388428,43387647,43386998,43386670,43386226,43385106	Gene ID= ENSG00000159479.16 TPM= 14.01 Transcript Type= protein_coding
chr1	43451158	43453845	43451158	43453845	-	transcript4894.chr1.nic@HYI	transcript4894.chr1.nic	protein_coding	43453595,43452205,43451935,43451798,43451648,43451410,43451158	43453845,43453497,43452013,43451847,43451717,43451544,43451311	Gene ID= ENSG00000178922.16 TPM= 4.67 Transcript Type= NA
chr1	43451153	43453844	43451153	43453844	-	transcript4899.chr1.nic@HYI	transcript4899.chr1.nic	protein_coding	43453595,43452205,43451935,43451798,43451648,43451153	43453844,43453497,43452013,43451847,43451717,43451544	Gene ID= ENSG00000178922.16 TPM= 3.5 Transcript Type= NA
chr1	43451158	43453963	43451158	43453963	-	ENST00000372432.5@HYI	ENST00000372432.5	protein_coding	43453595,43453386,43452205,43451935,43451798,43451648,43451428,43451158	43453963,43453497,43452319,43452013,43451847,43451717,43451544,43451311	Gene ID= ENSG00000178922.16 TPM= 37.16 Transcript Type= protein_coding
chr1	43451160	43453909	43451160	43453909	-	ENST00000372427.5@HYI	ENST00000372427.5	protein_coding	43452205,43451935,43451798,43451648,43451428,43451160	43453909,43452013,43451847,43451717,43451544,43451311	Gene ID= ENSG00000178922.16 TPM= 7.01 Transcript Type= retained_intron
chr1	43451154	43453825	43451154	43453825	-	ENST00000372434.5@HYI	ENST00000372434.5	protein_coding	43453595,43453413,43452903,43452205,43451935,43451798,43451648,43451410,43451154	43453825,43453497,43453004,43452319,43452013,43451847,43451717,43451544,43451311	Gene ID= ENSG00000178922.16 TPM= 1.75 Transcript Type= protein_coding
chr1	43530876	43623666	43530876	43623666	+	ENST00000359947.8@PTPRF	ENST00000359947.8	protein_coding	43530876,43538198,43545031,43553492,43553800,43569590,43578810,43588731,43590972,43591812,43592457,43597748,43598720,43602071,43603416,43603611,43604903,43605190,43605529,43606240,43606814,43609383,43613618,43617445,43617736,43618630,43619048,43619288,43619680,43620095,43620454,43620838,43621097,43621935	43531090,43538277,43545166,43553637,43553941,43569778,43578920,43589000,43591553,43591948,43592601,43598053,43598913,43602097,43603533,43604189,43605000,43605443,43605622,43606458,43606968,43609498,43613715,43617568,43617911,43618749,43619202,43619573,43619858,43620221,43620579,43620992,43621232,43623666	Gene ID= ENSG00000142949.16 TPM= 226.51 Transcript Type= protein_coding
chr1	43530903	43580078	43530903	43580078	+	ENST00000436724.5@PTPRF	ENST00000436724.5	protein_coding	43530903,43538198,43545031,43553492,43553800,43569590,43575910,43578810	43531090,43538277,43545166,43553637,43553941,43569778,43575927,43580078	Gene ID= ENSG00000142949.16 TPM= 7.01 Transcript Type= processed_transcript
chr1	43530890	43622357	43530890	43622357	+	ENST00000438120.5@PTPRF	ENST00000438120.5	protein_coding	43530890,43538198,43545031,43553492,43553800,43569590,43578810,43588731,43590972,43591812,43592457,43597748,43598720,43603416,43603611,43604903,43605190,43605529,43606240,43606814,43609383,43613618,43617445,43617736,43618630,43619048,43619288,43619680,43620095,43620454,43620838,43621097,43621935	43531090,43538277,43545166,43553637,43553941,43569778,43578920,43589000,43591553,43591948,43592601,43598053,43598913,43603533,43604189,43605000,43605443,43605622,43606458,43606968,43609498,43613715,43617568,43617911,43618749,43619202,43619573,43619858,43620221,43620579,43620992,43621232,43622357	Gene ID= ENSG00000142949.16 TPM= 44.37 Transcript Type= protein_coding
chr1	43650158	43705515	43650158	43705515	+	ENST00000372396.3@KDM4A	ENST00000372396.3	protein_coding	43650158,43653137,43655591,43660298,43662894,43665696,43666452,43666954,43667772,43669100,43671505,43683684,43688914,43690845,43691496,43692256,43693994,43694709,43697843,43703617,43704020,43704230	43650252,43653313,43655766,43660412,43663087,43665745,43666555,43667091,43668019,43669299,43671875,43683804,43689095,43691049,43691572,43692311,43694102,43694894,43698013,43703736,43704112,43705515	Gene ID= ENSG00000066135.12 TPM= 8.17 Transcript Type= protein_coding
chr1	43699093	43701209	43699093	43701209	-	transcript4922.chr1.nnic@NA	transcript4922.chr1.nnic	NA	43699093	43701209	Gene ID= novel_gene_chr1_4923 TPM= 4.67 Transcript Type= NA
chr1	43707495	43931159	43707495	43931159	+	transcript4925.chr1.nic@ST3GAL3	transcript4925.chr1.nic	protein_coding	43707495,43736233,43792102,43814891,43824731,43838219,43894383,43898235,43899168,43899541,43920404,43920782,43930132	43707693,43736380,43792149,43814933,43824892,43838311,43894477,43898298,43899263,43899727,43920550,43920928,43931159	Gene ID= ENSG00000126091.19 TPM= 6.62 Transcript Type= NA
chr1	43707547	43931159	43707547	43931159	+	ENST00000361392.8@ST3GAL3	ENST00000361392.8	protein_coding	43707547,43736233,43792102,43814891,43838219,43894383,43898235,43899168,43899541,43920404,43920782,43930132	43707693,43736380,43792149,43814933,43838311,43894477,43898298,43899263,43899727,43920550,43920928,43931159	Gene ID= ENSG00000126091.19 TPM= 20.05 Transcript Type= protein_coding
chr1	43707547	43931159	43707547	43931159	+	ENST00000361400.8@ST3GAL3	ENST00000361400.8	protein_coding	43707547,43736233,43814891,43838219,43894383,43898235,43899168,43899541,43920404,43920782,43930132	43707693,43736380,43814933,43838311,43894477,43898298,43899263,43899727,43920550,43920928,43931159	Gene ID= ENSG00000126091.19 TPM= 6.04 Transcript Type= protein_coding
chr1	43707533	43931165	43707533	43931165	+	ENST00000353126.7@ST3GAL3	ENST00000353126.7	protein_coding	43707533,43736233,43792102,43814891,43838219,43894383,43898235,43899168,43899541,43930132	43707693,43736380,43792149,43814933,43838311,43894477,43898298,43899263,43899727,43931165	Gene ID= ENSG00000126091.19 TPM= 2.34 Transcript Type= protein_coding
chr1	43915976	43917027	43915976	43917027	+	transcript4935.chr1.nnic@NA	transcript4935.chr1.nnic	NA	43915976	43917027	Gene ID= novel_gene_chr1_4936 TPM= 2.34 Transcript Type= NA
chr1	43933320	43937241	43933320	43937241	+	ENST00000372359.9@ARTN	ENST00000372359.9	protein_coding	43933320,43934112,43935590,43936093,43936302	43933885,43934260,43935716,43936231,43937241	Gene ID= ENSG00000117407.16 TPM= 1.17 Transcript Type= protein_coding
chr1	43946705	43959485	43946705	43959485	+	transcript4943.chr1.nic@IPO13	transcript4943.chr1.nic	protein_coding	43946705,43949417,43956320,43956560,43956810,43957195,43957402,43957977,43958242,43958461,43958746	43947684,43950153,43956460,43956701,43956976,43957315,43957549,43958158,43958268,43958595,43959485	Gene ID= ENSG00000117408.10 TPM= 3.5 Transcript Type= NA
chr1	43946939	43968022	43946939	43968022	+	ENST00000372343.7@IPO13	ENST00000372343.7	protein_coding	43946939,43949417,43956320,43956560,43956810,43957195,43957402,43957977,43958242,43958461,43958746,43960249,43960876,43961166,43964269,43966575,43966724,43966930,43967315,43967586	43947684,43950153,43956460,43956701,43956976,43957315,43957549,43958158,43958268,43958595,43958889,43960329,43961013,43961262,43964321,43966641,43966782,43967019,43967496,43968022	Gene ID= ENSG00000117408.10 TPM= 24.52 Transcript Type= protein_coding
chr1	43948424	43950364	43948424	43950364	+	transcript4945.chr1.nnic@NA	transcript4945.chr1.nnic	NA	43948424	43950364	Gene ID= novel_gene_chr1_4946 TPM= 2.34 Transcript Type= NA
chr1	43969958	43973369	43969958	43973369	+	transcript4952.chr1.nic@DPH2	transcript4952.chr1.nic	protein_coding	43969958,43970596,43972158,43972415	43970322,43972070,43972334,43973369	Gene ID= ENSG00000132768.13 TPM= 4.29 Transcript Type= NA
chr1	43970004	43973369	43970004	43973369	+	ENST00000255108.7@DPH2	ENST00000255108.7	protein_coding	43970004,43970596,43970966,43971387,43972158,43972415	43970322,43970708,43971189,43972070,43972334,43973369	Gene ID= ENSG00000132768.13 TPM= 16.54 Transcript Type= protein_coding
chr1	43970010	43973369	43970010	43973369	+	ENST00000495421.1@DPH2	ENST00000495421.1	protein_coding	43970010,43970596,43970966,43971387,43972158,43972415	43970270,43970708,43971189,43972070,43972334,43973369	Gene ID= ENSG00000132768.13 TPM= 6.04 Transcript Type= nonsense_mediated_decay
chr1	43974648	43978294	43974648	43978294	+	ENST00000472174.6@ATP6V0B	ENST00000472174.6	protein_coding	43974648,43975800,43976090,43976302,43976590,43976773,43977026,43977981	43975107,43975848,43976173,43976379,43976659,43976824,43977216,43978294	Gene ID= ENSG00000117410.13 TPM= 224.67 Transcript Type= protein_coding
chr1	43974957	43978295	43974957	43978295	+	transcript4955.chr1.nic@ATP6V0B	transcript4955.chr1.nic	protein_coding	43974957,43975800,43976302,43976590,43976773,43977026,43977981	43975107,43976173,43976379,43976659,43976824,43977216,43978295	Gene ID= ENSG00000117410.13 TPM= 11 Transcript Type= NA
chr1	43974948	43978289	43974948	43978289	+	ENST00000236067.8@ATP6V0B	ENST00000236067.8	protein_coding	43974948,43976090,43976302,43976590,43976773,43977026,43977981	43975107,43976173,43976379,43976659,43976824,43977216,43978289	Gene ID= ENSG00000117410.13 TPM= 18.77 Transcript Type= protein_coding
chr1	43974972	43978292	43974972	43978292	+	ENST00000473485.5@ATP6V0B	ENST00000473485.5	protein_coding	43974972,43976090,43976302,43976590,43976773,43977026,43977981	43975848,43976173,43976379,43976659,43976824,43977216,43978292	Gene ID= ENSG00000117410.13 TPM= 3.6 Transcript Type= retained_intron
chr1	43979199	43991168	43979199	43991168	+	transcript4977.chr1.nic@B4GALT2	transcript4977.chr1.nic	protein_coding	43979199,43981109,43981689,43984865,43985278,43985517,43990298	43979616,43981473,43981924,43985055,43985400,43985621,43991168	Gene ID= ENSG00000117411.16 TPM= 9.34 Transcript Type= NA
chr1	43979936	43991170	43979936	43991170	+	ENST00000309519.8@B4GALT2	ENST00000309519.8	protein_coding	43979936,43981109,43981689,43984865,43985278,43985517,43990298	43980046,43981473,43981924,43985055,43985400,43985621,43991170	Gene ID= ENSG00000117411.16 TPM= 5.25 Transcript Type= protein_coding
chr1	43979202	43991170	43979202	43991170	+	ENST00000372324.5@B4GALT2	ENST00000372324.5	protein_coding	43979202,43981109,43981689,43984865,43985278,43985517,43990298	43979511,43981473,43981924,43985055,43985400,43985621,43991170	Gene ID= ENSG00000117411.16 TPM= 67.14 Transcript Type= protein_coding
chr1	43989351	43991818	43989351	43991818	-	transcript4985.chr1.nnic@NA	transcript4985.chr1.nnic	NA	43989351	43991818	Gene ID= novel_gene_chr1_4986 TPM= 3.5 Transcript Type= NA
chr1	43991785	43996528	43991785	43996528	+	transcript4971.chr1.nic@CCDC24	transcript4971.chr1.nic	protein_coding	43991785,43992212,43992523,43993890,43995108,43995601,43995778,43995938	43992004,43992387,43992639,43993964,43995162,43995670,43995856,43996528	Gene ID= ENSG00000159214.12 TPM= 3.5 Transcript Type= NA
chr1	43996483	44031386	43996483	44031386	-	ENST00000372310.7@SLC6A9	ENST00000372310.7	protein_coding	44031306,44024248,44010726,44009965,44008353,44002853,44002512,44002313,44001390,44001164,44000956,44000767,43997855,43996483	44031386,44024362,44010882,44010096,44008623,44002985,44002646,44002416,44001627,44001298,44001055,44000867,43998025,43997739	Gene ID= ENSG00000196517.11 TPM= 25.69 Transcript Type= protein_coding
chr1	44213447	44220681	44213447	44220681	+	transcript4991.chr1.nic@DMAP1	transcript4991.chr1.nic	protein_coding	44213447,44213709,44214350,44214703,44215306,44218588,44219056,44219406,44219806,44220017,44220559	44213527,44213858,44214441,44214898,44218469,44218755,44219241,44219477,44219878,44220309,44220681	Gene ID= ENSG00000178028.13 TPM= 3.79 Transcript Type= NA
chr1	44213455	44220681	44213455	44220681	+	ENST00000361745.10@DMAP1	ENST00000361745.10	protein_coding	44213455,44213749,44214350,44214703,44218311,44218588,44219056,44219406,44219806,44220017,44220559	44213527,44213858,44214441,44214898,44218469,44218755,44219241,44219477,44219878,44220309,44220681	Gene ID= ENSG00000178028.13 TPM= 6.13 Transcript Type= protein_coding
chr1	44213471	44220681	44213471	44220681	+	transcript4996.chr1.nic@DMAP1	transcript4996.chr1.nic	protein_coding	44213471,44213749,44214350,44214703,44218311,44218588,44219056,44219406,44219806,44220017,44220559	44213662,44213858,44214441,44214898,44218469,44218755,44219241,44219477,44219878,44220309,44220681	Gene ID= ENSG00000178028.13 TPM= 2.63 Transcript Type= NA
chr1	44213447	44220681	44213447	44220681	+	transcript4997.chr1.nic@DMAP1	transcript4997.chr1.nic	protein_coding	44213447,44213709,44214350,44214703,44218588,44219056,44219406,44219806,44220017,44220559	44213527,44213858,44214441,44218469,44218755,44219241,44219477,44219878,44220309,44220681	Gene ID= ENSG00000178028.13 TPM= 3.21 Transcript Type= NA
chr1	44213465	44220681	44213465	44220681	+	transcript4999.chr1.nic@DMAP1	transcript4999.chr1.nic	protein_coding	44213465,44213663,44214350,44214703,44218588,44219056,44219406,44219806,44220017,44220559	44213527,44213858,44214441,44218469,44218755,44219241,44219477,44219878,44220309,44220681	Gene ID= ENSG00000178028.13 TPM= 5.55 Transcript Type= NA
chr1	44213488	44220681	44213488	44220681	+	ENST00000315913.9@DMAP1	ENST00000315913.9	protein_coding	44213488,44213709,44214350,44214703,44218311,44218588,44219056,44219406,44219806,44220017,44220559	44213527,44213858,44214441,44214898,44218469,44218755,44219241,44219477,44219878,44220309,44220681	Gene ID= ENSG00000178028.13 TPM= 19.56 Transcript Type= protein_coding
chr1	44213491	44220681	44213491	44220681	+	ENST00000372289.6@DMAP1	ENST00000372289.6	protein_coding	44213491,44214350,44214703,44218311,44218588,44219056,44219406,44219806,44220017,44220559	44213858,44214441,44214898,44218469,44218755,44219241,44219477,44219878,44220309,44220681	Gene ID= ENSG00000178028.13 TPM= 7.88 Transcript Type= protein_coding
chr1	44214833	44220681	44214833	44220681	+	ENST00000488433.5@DMAP1	ENST00000488433.5	protein_coding	44214833,44218588,44219056,44219406,44219806,44220017,44220559	44218469,44218755,44219241,44219477,44219878,44220309,44220681	Gene ID= ENSG00000178028.13 TPM= 6.13 Transcript Type= processed_transcript
chr1	44221094	44355264	44221094	44355264	-	transcript5002.chr1.nic@ERI3	transcript5002.chr1.nic	protein_coding	44354892,44352850,44339045,44319628,44313169,44308310,44284835,44247939,44241915,44221094	44355264,44352925,44339322,44319744,44313228,44308401,44284907,44248038,44242080,44221640	Gene ID= ENSG00000117419.14 TPM= 2.34 Transcript Type= NA
chr1	44221070	44355281	44221070	44355281	-	transcript5005.chr1.nnic@ERI3	transcript5005.chr1.nnic	protein_coding	44355260,44352850,44339045,44319628,44313169,44308310,44284835,44247939,44221070	44355281,44352925,44339322,44319744,44313228,44308401,44284907,44248038,44221640	Gene ID= ENSG00000117419.14 TPM= 5.25 Transcript Type= NA
chr1	44221070	44355267	44221070	44355267	-	transcript5006.chr1.nic@ERI3	transcript5006.chr1.nic	protein_coding	44352850,44339045,44319628,44313169,44308310,44284835,44247939,44221070	44355267,44339322,44319744,44313228,44308401,44284907,44248038,44221640	Gene ID= ENSG00000117419.14 TPM= 7.59 Transcript Type= NA
chr1	44221070	44355257	44221070	44355257	-	transcript5007.chr1.nic@ERI3	transcript5007.chr1.nic	protein_coding	44354892,44339045,44319628,44313169,44308310,44284835,44247939,44221070	44355257,44339322,44319744,44313228,44308401,44284907,44248038,44221640	Gene ID= ENSG00000117419.14 TPM= 4.09 Transcript Type= NA
chr1	44221070	44355290	44221070	44355290	-	transcript5008.chr1.nnic@ERI3	transcript5008.chr1.nnic	protein_coding	44355260,44339045,44319628,44313169,44308310,44284835,44247939,44221070	44355290,44339322,44319744,44313228,44308401,44284907,44248038,44221640	Gene ID= ENSG00000117419.14 TPM= 12.26 Transcript Type= NA
chr1	44221070	44355310	44221070	44355310	-	transcript5011.chr1.nnic@ERI3	transcript5011.chr1.nnic	protein_coding	44355260,44319628,44313169,44308310,44284835,44247939,44221070	44355310,44319744,44313228,44308401,44284907,44248038,44221640	Gene ID= ENSG00000117419.14 TPM= 7.59 Transcript Type= NA
chr1	44221094	44355290	44221094	44355290	-	transcript5014.chr1.nnic@ERI3	transcript5014.chr1.nnic	protein_coding	44355260,44339045,44319628,44313169,44308310,44284835,44221094	44355290,44339322,44319744,44313228,44308401,44284907,44221640	Gene ID= ENSG00000117419.14 TPM= 2.34 Transcript Type= NA
chr1	44221070	44355208	44221070	44355208	-	ENST00000372257.6@ERI3	ENST00000372257.6	protein_coding	44354892,44352850,44339045,44319628,44313169,44308310,44284835,44247939,44221070	44355208,44352925,44339322,44319744,44313228,44308401,44284907,44248038,44221640	Gene ID= ENSG00000117419.14 TPM= 49.62 Transcript Type= protein_coding
chr1	44631947	44651723	44631947	44651723	+	transcript5022.chr1.nic@RNF220	transcript5022.chr1.nic	protein_coding	44631947,44632343,44635545,44636030,44644698,44644995,44645221,44645410,44649661,44649883,44650704	44632212,44632385,44635588,44636162,44644794,44645081,44645276,44645488,44649769,44649957,44651723	Gene ID= ENSG00000187147.17 TPM= 21.97 Transcript Type= NA
chr1	44631947	44651723	44631947	44651723	+	transcript5023.chr1.nic@RNF220	transcript5023.chr1.nic	protein_coding	44631947,44632343,44635545,44636030,44644698,44644995,44645221,44645410,44649661,44649883,44650704	44632212,44632385,44635666,44636162,44644794,44645081,44645276,44645488,44649769,44649957,44651723	Gene ID= ENSG00000187147.17 TPM= 21.19 Transcript Type= NA
chr1	44631968	44651723	44631968	44651723	+	ENST00000474064.5@RNF220	ENST00000474064.5	protein_coding	44631968,44632343,44635545,44636030,44644698,44644995,44645221,44645410,44649661,44649883	44632212,44632385,44635588,44636162,44644794,44645081,44645276,44645488,44649769,44651723	Gene ID= ENSG00000187147.17 TPM= 5.55 Transcript Type= processed_transcript
chr1	44635238	44674477	44635238	44674477	-	ENST00000372244.3@TMEM53	ENST00000372244.3	protein_coding	44674331,44645360,44635238	44674477,44645464,44636457	Gene ID= ENSG00000126106.13 TPM= 1.75 Transcript Type= protein_coding
chr1	44653247	44674555	44653247	44674555	-	ENST00000372237.7@TMEM53	ENST00000372237.7	protein_coding	44674331,44660174,44653247	44674555,44660295,44655209	Gene ID= ENSG00000126106.13 TPM= 3.5 Transcript Type= protein_coding
chr1	44635238	44674462	44635238	44674462	-	ENST00000372243.7@TMEM53	ENST00000372243.7	protein_coding	44674331,44660174,44645360,44635238	44674462,44660295,44645464,44636457	Gene ID= ENSG00000126106.13 TPM= 6.42 Transcript Type= protein_coding
chr1	44739820	44767767	44739820	44767767	+	ENST00000372224.8@KIF2C	ENST00000372224.8	protein_coding	44739820,44740913,44747384,44747652,44750442,44753132,44753733,44754750,44755929,44756075,44757556,44757908,44758049,44759206,44760280,44760592,44761916,44762346,44762545,44766826,44767097	44740002,44741007,44747485,44747700,44750564,44753254,44753833,44754845,44755983,44756237,44757646,44757971,44758140,44759348,44760484,44760702,44761983,44762451,44762658,44766949,44767767	Gene ID= ENSG00000142945.12 TPM= 1.17 Transcript Type= protein_coding
chr1	44775573	44778779	44775573	44778779	+	ENST00000372209.3@RPS8	ENST00000372209.3	protein_coding	44775573,44776034,44776675,44777614,44778000,44778576	44775600,44776140,44776714,44777789,44778129,44778779	Gene ID= ENSG00000142937.11 TPM= 10.51 Transcript Type= protein_coding
chr1	44775437	44778779	44775437	44778779	+	ENST00000396651.7@RPS8	ENST00000396651.7	protein_coding	44775437,44776034,44776675,44777614,44778000,44778576	44775600,44776140,44776774,44777789,44778129,44778779	Gene ID= ENSG00000142937.11 TPM= 428.51 Transcript Type= protein_coding
chr1	44800295	44805990	44800295	44805990	+	transcript5064.chr1.nnic@PLK3	transcript5064.chr1.nnic	protein_coding	44800295,44800840,44801036,44801622,44801845,44802760,44802955,44803600,44803931,44804163,44804339,44804650,44805266,44805487	44800673,44800947,44801152,44801751,44801932,44802855,44803153,44803691,44804024,44804246,44804501,44804779,44805379,44805990	Gene ID= ENSG00000173846.12 TPM= 8.76 Transcript Type= NA
chr1	44800346	44805990	44800346	44805990	+	transcript5065.chr1.nic@PLK3	transcript5065.chr1.nic	protein_coding	44800346,44800840,44801036,44801622,44801845,44802760,44802955,44803600,44803931,44804163,44804339,44804650,44805266,44805487	44800673,44800947,44801152,44801751,44801932,44802855,44803391,44803691,44804024,44804246,44804501,44804779,44805379,44805990	Gene ID= ENSG00000173846.12 TPM= 21.6 Transcript Type= NA
chr1	44850778	44986610	44850778	44986610	-	ENST00000360403.6@EIF2B3	ENST00000360403.6	protein_coding	44986493,44981021,44978315,44941506,44926628,44897355,44881612,44879818,44875618,44874678,44857704,44850778	44986610,44981177,44978460,44941665,44926739,44897444,44881739,44880008,44875695,44874826,44857807,44851003	Gene ID= ENSG00000070785.16 TPM= 7.01 Transcript Type= protein_coding
chr1	44874527	44986587	44874527	44986587	-	ENST00000372183.7@EIF2B3	ENST00000372183.7	protein_coding	44986493,44981021,44978315,44941506,44926628,44897355,44881612,44879818,44875618,44874527	44986587,44981177,44978460,44941665,44926739,44897444,44881739,44880008,44875695,44874826	Gene ID= ENSG00000070785.16 TPM= 4.67 Transcript Type= protein_coding
chr1	45002540	45011359	45002540	45011359	-	transcript5099.chr1.nnic@HECTD3	transcript5099.chr1.nnic	protein_coding	45010889,45010546,45010201,45009568,45009369,45009144,45008536,45008240,45007413,45007219,45006951,45006692,45005997,45005794,45004600,45004248,45004060,45003855,45003669,45002540	45011359,45010706,45010293,45009683,45009482,45009226,45008701,45008321,45007595,45007271,45007015,45006795,45006116,45005883,45004806,45004377,45004134,45003936,45003740,45003576	Gene ID= ENSG00000126107.14 TPM= 14.59 Transcript Type= NA
chr1	45002540	45011359	45002540	45011359	-	transcript5102.chr1.nic@HECTD3	transcript5102.chr1.nic	protein_coding	45010889,45010546,45010201,45009986,45009568,45009369,45009144,45008536,45008240,45007413,45007219,45006951,45006692,45005794,45004600,45004248,45004060,45003855,45003669,45002540	45011359,45010706,45010293,45010121,45009683,45009482,45009226,45008701,45008321,45007595,45007271,45007015,45006795,45006116,45004806,45004377,45004134,45003936,45003740,45003576	Gene ID= ENSG00000126107.14 TPM= 10.51 Transcript Type= NA
chr1	45002540	45011329	45002540	45011329	-	ENST00000372172.4@HECTD3	ENST00000372172.4	protein_coding	45010889,45010546,45010201,45009986,45009568,45009369,45009144,45008536,45008240,45007413,45007219,45006951,45006692,45005997,45005794,45004600,45004248,45004060,45003855,45003669,45002540	45011329,45010706,45010293,45010121,45009683,45009482,45009226,45008701,45008321,45007595,45007271,45007015,45006795,45006116,45005883,45004806,45004377,45004134,45003936,45003740,45003576	Gene ID= ENSG00000126107.14 TPM= 79.98 Transcript Type= protein_coding
chr1	45012222	45015575	45012222	45015575	+	transcript5108.chr1.nic@UROD	transcript5108.chr1.nic	protein_coding	45012222,45012857,45013136,45013292,45013575,45013909,45014439,45014736,45014940,45015337	45012285,45013019,45013215,45013354,45013791,45014070,45014576,45014836,45015006,45015575	Gene ID= ENSG00000126088.13 TPM= 2.92 Transcript Type= NA
chr1	45012236	45015575	45012236	45015575	+	transcript5111.chr1.nic@UROD	transcript5111.chr1.nic	protein_coding	45012236,45012857,45013136,45013594,45013909,45014439,45014736,45014940,45015337	45012285,45013019,45013354,45013791,45014070,45014576,45014836,45015006,45015575	Gene ID= ENSG00000126088.13 TPM= 2.92 Transcript Type= NA
chr1	45012147	45015575	45012147	45015575	+	ENST00000246337.8@UROD	ENST00000246337.8	protein_coding	45012147,45012907,45013136,45013292,45013594,45013909,45014439,45014736,45014940,45015337	45012285,45013019,45013215,45013354,45013791,45014070,45014576,45014836,45015006,45015575	Gene ID= ENSG00000126088.13 TPM= 44.95 Transcript Type= protein_coding
chr1	45204308	45206572	45204308	45206572	-	transcript5126.chr1.nnic@NA	transcript5126.chr1.nnic	NA	45204308	45206572	Gene ID= novel_gene_chr1_5127 TPM= 2.34 Transcript Type= NA
chr1	45329242	45340115	45329242	45340115	-	ENST00000355498.6@MUTYH	ENST00000355498.6	protein_coding	45339976,45334391,45333413,45333285,45333097,45332918,45332763,45332574,45332391,45332166,45332023,45331661,45331420,45331182,45330516,45329242	45340115,45334511,45333561,45333324,45333170,45332959,45332834,45332687,45332488,45332310,45332086,45331849,45331556,45331334,45330557,45329437	Gene ID= ENSG00000132781.17 TPM= 1.75 Transcript Type= protein_coding
chr1	45329242	45340470	45329242	45340470	-	ENST00000372115.7@MUTYH	ENST00000372115.7	protein_coding	45340219,45334391,45333413,45333285,45333097,45332918,45332763,45332574,45332391,45332166,45332023,45331661,45331420,45331182,45330516,45329242	45340470,45334511,45333561,45333324,45333170,45332959,45332834,45332687,45332488,45332310,45332086,45331849,45331556,45331334,45330557,45329437	Gene ID= ENSG00000132781.17 TPM= 5.25 Transcript Type= protein_coding
chr1	45340085	45343975	45340085	45343975	+	transcript5141.chr1.nic@TOE1	transcript5141.chr1.nic	protein_coding	45340085,45341073,45341303,45341473,45341949,45342384,45342735,45343082	45340304,45341215,45341343,45341569,45342107,45342643,45343002,45343975	Gene ID= ENSG00000132773.11 TPM= 4.09 Transcript Type= NA
chr1	45339670	45343975	45339670	45343975	+	ENST00000372090.5@TOE1	ENST00000372090.5	protein_coding	45339670,45341073,45341303,45341473,45341949,45342384,45342843,45343082	45340304,45341215,45341343,45341569,45342107,45342643,45343002,45343975	Gene ID= ENSG00000132773.11 TPM= 9.92 Transcript Type= protein_coding
chr1	45343883	45491166	45343883	45491166	-	ENST00000372086.3@TESK2	ENST00000372086.3	protein_coding	45490852,45457564,45421725,45385912,45355303,45347918,45347609,45346979,45346693,45345877,45343883	45491166,45457871,45421846,45385960,45355449,45348000,45347693,45347062,45346779,45345994,45345558	Gene ID= ENSG00000070759.16 TPM= 7.01 Transcript Type= protein_coding
chr1	45511036	45521938	45511036	45521938	-	ENST00000262746.5@PRDX1	ENST00000262746.5	protein_coding	45521609,45518938,45515654,45514873,45514507,45511036	45521938,45519054,45515807,45514995,45514637,45511414	Gene ID= ENSG00000117450.13 TPM= 8.17 Transcript Type= protein_coding
chr1	45511047	45521956	45511047	45521956	-	ENST00000319248.12@PRDX1	ENST00000319248.12	protein_coding	45521829,45518938,45515654,45514873,45514507,45511047	45521956,45519054,45515807,45514995,45514637,45511414	Gene ID= ENSG00000117450.13 TPM= 261.54 Transcript Type= protein_coding
chr1	45550799	45570049	45550799	45570049	+	transcript5160.chr1.nic@AKR1A1	transcript5160.chr1.nic	protein_coding	45550799,45550966,45552436,45561789,45566569,45566869,45567982,45568485,45568927,45569143,45569891	45550876,45551155,45552563,45561878,45566688,45567020,45568177,45568684,45568999,45569229,45570049	Gene ID= ENSG00000117448.13 TPM= 24.03 Transcript Type= NA
chr1	45550783	45570048	45550783	45570048	+	ENST00000621846.4@AKR1A1	ENST00000621846.4	protein_coding	45550783,45550966,45561789,45566569,45566869,45567982,45568485,45568927,45569143,45569891	45550876,45551155,45561878,45566688,45567020,45568177,45568684,45568999,45569229,45570048	Gene ID= ENSG00000117448.13 TPM= 37.65 Transcript Type= protein_coding
chr1	45550543	45570049	45550543	45570049	+	ENST00000372070.7@AKR1A1	ENST00000372070.7	protein_coding	45550543,45552436,45561789,45566569,45566869,45567982,45568485,45568927,45569143,45569891	45551155,45552563,45561878,45566688,45567020,45568177,45568684,45568999,45569229,45570049	Gene ID= ENSG00000117448.13 TPM= 22.86 Transcript Type= protein_coding
chr1	45551067	45570049	45551067	45570049	+	ENST00000351829.8@AKR1A1	ENST00000351829.8	protein_coding	45551067,45561789,45566569,45566869,45567982,45568485,45568927,45569143,45569891	45551155,45561878,45566688,45567020,45568177,45568684,45568999,45569229,45570049	Gene ID= ENSG00000117448.13 TPM= 40.38 Transcript Type= protein_coding
chr1	45584065	45618247	45584065	45618247	+	ENST00000351223.7@NASP	ENST00000351223.7	protein_coding	45584065,45591223,45602255,45604936,45606482,45613169,45614096,45614293,45615013,45615305,45616337,45616626,45617463,45618061	45584205,45591270,45602365,45605016,45606591,45613248,45614181,45614366,45615201,45615471,45616393,45616703,45617591,45618247	Gene ID= ENSG00000132780.16 TPM= 19.85 Transcript Type= protein_coding
chr1	45627306	45686630	45627306	45686630	-	ENST00000355105.7@GPBP1L1	ENST00000355105.7	protein_coding	45686412,45685576,45660184,45659028,45655190,45654543,45642427,45640210,45634096,45633489,45630482,45629576,45627306	45686630,45685620,45661225,45659142,45655319,45654829,45642499,45640403,45634236,45633647,45630606,45629678,45628408	Gene ID= ENSG00000159592.10 TPM= 24.52 Transcript Type= protein_coding
chr1	45627488	45687161	45627488	45687161	-	transcript5187.chr1.nic@GPBP1L1	transcript5187.chr1.nic	protein_coding	45686993,45685576,45660184,45659028,45655190,45654543,45642427,45640210,45634096,45633489,45630482,45629576,45627488	45687161,45685620,45661225,45659142,45655319,45654829,45642499,45640403,45634236,45633647,45630606,45629678,45628408	Gene ID= ENSG00000159592.10 TPM= 6.42 Transcript Type= NA
chr1	45627488	45687106	45627488	45687106	-	transcript5193.chr1.nic@GPBP1L1	transcript5193.chr1.nic	protein_coding	45686993,45660184,45659028,45655190,45654543,45642427,45640210,45634096,45633489,45630482,45629576,45627488	45687106,45661225,45659142,45655319,45654829,45642499,45640403,45634236,45633647,45630606,45629678,45628408	Gene ID= ENSG00000159592.10 TPM= 11.09 Transcript Type= NA
chr1	45627304	45686536	45627304	45686536	-	ENST00000290795.7@GPBP1L1	ENST00000290795.7	protein_coding	45686412,45660184,45659028,45655190,45654543,45642427,45640210,45634096,45633489,45630482,45629576,45627304	45686536,45661225,45659142,45655319,45654829,45642499,45640403,45634236,45633647,45630606,45629678,45628408	Gene ID= ENSG00000159592.10 TPM= 9.34 Transcript Type= protein_coding
chr1	45687214	45694443	45687214	45694443	+	ENST00000372025.4@TMEM69	ENST00000372025.4	protein_coding	45687214,45690974,45693204	45688275,45691110,45694443	Gene ID= ENSG00000159596.6 TPM= 17.51 Transcript Type= protein_coding
chr1	45711932	45750669	45711932	45750669	-	transcript5203.chr1.nnic@IPP	transcript5203.chr1.nnic	protein_coding	45750597,45746120,45740901,45729614,45727631,45719203,45716895,45714246,45711932	45750669,45746461,45741332,45729769,45727798,45719340,45717017,45714466,45712296	Gene ID= ENSG00000197429.10 TPM= 2.34 Transcript Type= NA
chr1	45710824	45715213	45710824	45715213	+	transcript5212.chr1.nnic@NA	transcript5212.chr1.nnic	NA	45710824	45715213	Gene ID= novel_gene_chr1_5213 TPM= 4.67 Transcript Type= NA
chr1	45803613	46036124	45803613	46036124	+	ENST00000361297.6@MAST2	ENST00000361297.6	protein_coding	45803613,45824433,45829439,45882364,45959386,45997724,46002805,46006241,46008296,46010730,46019596,46021950,46022910,46023233,46023772,46025677,46027731,46028768,46029466,46029831,46030129,46030607,46031007,46031391,46032178,46032596,46033802,46034073,46034538	45804072,45824580,45829581,45882395,45959477,45997799,46002883,46006395,46008371,46010939,46019697,46022082,46022971,46023318,46023980,46025815,46027863,46028933,46029567,46029953,46030238,46030761,46031290,46031585,46032404,46032718,46033938,46034266,46036124	Gene ID= ENSG00000086015.20 TPM= 25.69 Transcript Type= protein_coding
chr1	46040142	46133036	46040142	46133036	-	ENST00000420542.5@PIK3R3	ENST00000420542.5	protein_coding	46132784,46131847,46080642,46077515,46066911,46066054,46061929,46055795,46046551,46045918,46040142	46133036,46131956,46080750,46077613,46067091,46066179,46062071,46055971,46046625,46046088,46043871	Gene ID= ENSG00000117461.14 TPM= 17.71 Transcript Type= protein_coding
chr1	46040140	46132642	46040140	46132642	-	ENST00000262741.9@PIK3R3	ENST00000262741.9	protein_coding	46131847,46080642,46077515,46066911,46066054,46061929,46055795,46046551,46045918,46040140	46132642,46080750,46077613,46067091,46066179,46062071,46055971,46046625,46046088,46043871	Gene ID= ENSG00000117461.14 TPM= 126.3 Transcript Type= protein_coding
chr1	46045618	46132630	46045618	46132630	-	transcript5226.chr1.nic@PIK3R3	transcript5226.chr1.nic	protein_coding	46131847,46080642,46077515,46066911,46066054,46061929,46055795,46046551,46045618	46132630,46080750,46077613,46067091,46066179,46062071,46055971,46046625,46046088	Gene ID= ENSG00000117461.14 TPM= 5.84 Transcript Type= NA
chr1	46069551	46073658	46069551	46073658	+	transcript5230.chr1.nnic@NA	transcript5230.chr1.nnic	NA	46069551	46073658	Gene ID= novel_gene_chr1_5231 TPM= 2.34 Transcript Type= NA
chr1	46180491	46185958	46180491	46185958	+	transcript5232.chr1.nic@TSPAN1	transcript5232.chr1.nic	protein_coding	46180491,46181100,46184191,46184594,46184785,46184960,46185225,46185486	46180658,46181164,46184397,46184668,46184883,46185115,46185308,46185958	Gene ID= ENSG00000117472.9 TPM= 3.5 Transcript Type= NA
chr1	46188683	46198443	46188683	46198443	-	ENST00000371984.7@POMGNT1	ENST00000371984.7	protein_coding	46198336,46197702,46196970,46196731,46196012,46195811,46194844,46194553,46194274,46193855,46193564,46193305,46193174,46192900,46192518,46192308,46192098,46190720,46190473,46189854,46189458,46188683	46198443,46197871,46197084,46196849,46196077,46195924,46194961,46194651,46194401,46193925,46193639,46193388,46193215,46192958,46192590,46192436,46192223,46190784,46190517,46189989,46189567,46189357	Gene ID= ENSG00000085998.13 TPM= 71.22 Transcript Type= protein_coding
chr1	46203334	46221261	46203334	46221261	+	ENST00000371980.3@LURAP1	ENST00000371980.3	protein_coding	46203334,46219699	46203624,46221261	Gene ID= ENSG00000171357.5 TPM= 4.67 Transcript Type= protein_coding
chr1	46277462	46303608	46277462	46303608	-	ENST00000617190.4@LRRC41	ENST00000617190.4	protein_coding	46303124,46298284,46297563,46285362,46281125,46280396,46280192,46279492,46279182,46277462	46303608,46298370,46297633,46286499,46281385,46280560,46280290,46279614,46279257,46279084	Gene ID= ENSG00000132128.16 TPM= 6.04 Transcript Type= protein_coding
chr1	46278401	46303074	46278401	46303074	-	transcript5251.chr1.nnic@LRRC41	transcript5251.chr1.nnic	protein_coding	46302763,46298284,46297563,46285362,46281125,46280396,46280192,46279492,46279182,46278401	46303074,46298370,46297633,46286499,46281385,46280560,46280290,46279614,46279257,46279084	Gene ID= ENSG00000132128.16 TPM= 12.84 Transcript Type= NA
chr1	46278401	46303298	46278401	46303298	-	transcript5256.chr1.nic@LRRC41	transcript5256.chr1.nic	protein_coding	46303124,46298284,46297563,46285362,46281125,46280396,46280192,46279182,46278401	46303298,46298370,46297633,46286499,46281385,46280560,46280290,46279614,46279084	Gene ID= ENSG00000132128.16 TPM= 9.34 Transcript Type= NA
chr1	46303631	46316776	46303631	46316776	+	ENST00000311672.9@UQCRH	ENST00000311672.9	protein_coding	46303631,46309101,46310155,46316552	46303820,46309127,46310316,46316776	Gene ID= ENSG00000173660.11 TPM= 47.29 Transcript Type= protein_coding
chr1	46303709	46316776	46303709	46316776	+	ENST00000496387.5@UQCRH	ENST00000496387.5	protein_coding	46303709,46309101,46309897,46310155,46316552	46303820,46309127,46310044,46310316,46316776	Gene ID= ENSG00000173660.11 TPM= 5.25 Transcript Type= nonsense_mediated_decay
chr1	46394265	46413845	46394265	46413845	+	transcript5278.chr1.nnic@FAAH	transcript5278.chr1.nnic	protein_coding	46394265,46402091,46405014,46405372,46405588,46405871,46406038,46406244,46408459,46409101,46410398,46411612,46412143,46413075,46413447	46394543,46402204,46405148,46405505,46405794,46405952,46406078,46406368,46408584,46409198,46410854,46411651,46412251,46413220,46413845	Gene ID= ENSG00000117480.15 TPM= 5.84 Transcript Type= NA
chr1	46394265	46413845	46394265	46413845	+	ENST00000243167.8@FAAH	ENST00000243167.8	protein_coding	46394265,46402091,46405014,46405372,46405588,46406038,46406244,46408459,46409101,46410398,46410814,46411612,46412143,46413075,46413447	46394543,46402204,46405148,46405505,46405794,46406078,46406368,46408584,46409198,46410497,46410854,46411651,46412251,46413220,46413845	Gene ID= ENSG00000117480.15 TPM= 47.87 Transcript Type= protein_coding
chr1	46394265	46413845	46394265	46413845	+	transcript5283.chr1.nic@FAAH	transcript5283.chr1.nic	protein_coding	46394265,46402091,46405014,46405372,46405588,46406038,46406244,46408459,46409101,46410398,46410814,46411612,46412143,46413123,46413447	46394543,46402204,46405148,46405505,46405794,46406078,46406368,46408584,46409198,46410497,46410854,46411651,46412251,46413220,46413845	Gene ID= ENSG00000117480.15 TPM= 4.67 Transcript Type= NA
chr1	46394265	46413845	46394265	46413845	+	transcript5290.chr1.nic@FAAH	transcript5290.chr1.nic	protein_coding	46394265,46402091,46405014,46405372,46405588,46406038,46406244,46408459,46409101,46410398,46411612,46412143,46413075,46413447	46394543,46402204,46405148,46405505,46405794,46406078,46406368,46408584,46409198,46410854,46411651,46412251,46413220,46413845	Gene ID= ENSG00000117480.15 TPM= 3.5 Transcript Type= NA
chr1	46394265	46413845	46394265	46413845	+	transcript5297.chr1.nic@FAAH	transcript5297.chr1.nic	protein_coding	46394265,46402091,46405014,46405372,46405588,46406244,46408459,46409101,46410398,46411612,46412143,46413075,46413447	46394543,46402204,46405148,46405505,46406078,46406368,46408584,46409198,46410854,46411651,46412251,46413220,46413845	Gene ID= ENSG00000117480.15 TPM= 5.84 Transcript Type= NA
chr1	46394265	46413845	46394265	46413845	+	transcript5303.chr1.nic@FAAH	transcript5303.chr1.nic	protein_coding	46394265,46402091,46405014,46405372,46405588,46406244,46408459,46409101,46410398,46412143,46413075,46413447	46394543,46402204,46405148,46405505,46406078,46406368,46408584,46409198,46411651,46412251,46413220,46413845	Gene ID= ENSG00000117480.15 TPM= 3.5 Transcript Type= NA
chr1	46413913	46415753	46413913	46415753	+	transcript5320.chr1.nnic@NA	transcript5320.chr1.nnic	NA	46413913	46415753	Gene ID= novel_gene_chr1_5321 TPM= 3.5 Transcript Type= NA
chr1	46557418	46604260	46557418	46604260	-	transcript5329.chr1.nic@MKNK1	transcript5329.chr1.nic	protein_coding	46604185,46594113,46585874,46583228,46580530,46576575,46574947,46572063,46568443,46565041,46562649,46561478,46560234,46557418	46604260,46594280,46585974,46583329,46580627,46576654,46575020,46572167,46568498,46565136,46562843,46561642,46560277,46558800	Gene ID= ENSG00000079277.19 TPM= 3.3 Transcript Type= NA
chr1	46557418	46604266	46557418	46604266	-	transcript5336.chr1.nic@MKNK1	transcript5336.chr1.nic	protein_coding	46604227,46594113,46583228,46580530,46576575,46574947,46572063,46568443,46565041,46562649,46561478,46560234,46557418	46604266,46594280,46583329,46580627,46576654,46575020,46572167,46568498,46565136,46562843,46561642,46560277,46558800	Gene ID= ENSG00000079277.19 TPM= 14.98 Transcript Type= NA
chr1	46557418	46604260	46557418	46604260	-	transcript5345.chr1.nic@MKNK1	transcript5345.chr1.nic	protein_coding	46604185,46594113,46583228,46580530,46576575,46574947,46572063,46568443,46565041,46562649,46561478,46557418	46604260,46594280,46583329,46580627,46576654,46575020,46572167,46568498,46565136,46562843,46561642,46558800	Gene ID= ENSG00000079277.19 TPM= 6.22 Transcript Type= NA
chr1	46557418	46562420	46557418	46562420	-	transcript5352.chr1.nic@MKNK1	transcript5352.chr1.nic	protein_coding	46561478,46560234,46557418	46562420,46560277,46558800	Gene ID= ENSG00000079277.19 TPM= 4.47 Transcript Type= NA
chr1	46557419	46604237	46557419	46604237	-	ENST00000371945.8@MKNK1	ENST00000371945.8	protein_coding	46604185,46594113,46583228,46580530,46576575,46574947,46572063,46568443,46565041,46562649,46561478,46560234,46557419	46604237,46594280,46583329,46580627,46576654,46575020,46572167,46568498,46565136,46562843,46561642,46560277,46558800	Gene ID= ENSG00000079277.19 TPM= 20.23 Transcript Type= protein_coding
chr1	46557418	46604214	46557418	46604214	-	ENST00000371946.8@MKNK1	ENST00000371946.8	protein_coding	46604185,46594113,46583228,46580530,46576575,46574947,46572063,46571417,46568443,46565041,46562649,46561478,46560234,46557418	46604214,46594280,46583329,46580627,46576654,46575020,46572167,46571539,46568498,46565136,46562843,46561642,46560277,46558800	Gene ID= ENSG00000079277.19 TPM= 2.14 Transcript Type= protein_coding
chr1	46582572	46585301	46582572	46585301	+	transcript5354.chr1.nnic@NA	transcript5354.chr1.nnic	NA	46582572	46585301	Gene ID= novel_gene_chr1_5355 TPM= 2.34 Transcript Type= NA
chr1	46607715	46616891	46607715	46616891	-	ENST00000319928.7@MOB3C	ENST00000319928.7	protein_coding	46616711,46612904,46610002,46607715	46616891,46613371,46610204,46609684	Gene ID= ENSG00000142961.14 TPM= 58.38 Transcript Type= protein_coding
chr1	46635041	46668473	46635041	46668473	-	transcript5363.chr1.nic@ATPAF1	transcript5363.chr1.nic	protein_coding	46668057,46665256,46658687,46658127,46652581,46645161,46643194,46635041	46668473,46665364,46658737,46658189,46652628,46645256,46643301,46635970	Gene ID= ENSG00000123472.12 TPM= 5.25 Transcript Type= NA
chr1	46635045	46668364	46635045	46668364	-	ENST00000574428.5@ATPAF1	ENST00000574428.5	protein_coding	46668057,46665256,46658687,46658127,46653817,46652581,46645161,46643194,46635045	46668364,46665364,46658737,46658189,46653867,46652628,46645256,46643301,46635970	Gene ID= ENSG00000123472.12 TPM= 67.14 Transcript Type= protein_coding
chr1	46675159	46719366	46675159	46719366	-	transcript5376.chr1.nic@EFCAB14	transcript5376.chr1.nic	protein_coding	46717903,46716295,46707906,46696551,46691827,46689587,46686784,46684491,46683300,46675159	46719366,46716443,46708051,46696649,46691937,46689691,46686870,46684602,46683425,46678636	Gene ID= ENSG00000159658.10 TPM= 67.43 Transcript Type= NA
chr1	46675159	46719064	46675159	46719064	-	ENST00000371933.7@EFCAB14	ENST00000371933.7	protein_coding	46717903,46716295,46707906,46696551,46691827,46689587,46688353,46686784,46684491,46683300,46675159	46719064,46716443,46708051,46696649,46691937,46689691,46688544,46686870,46684602,46683425,46678636	Gene ID= ENSG00000159658.10 TPM= 71.22 Transcript Type= protein_coding
chr1	46799046	46819349	46799046	46819349	+	ENST00000371923.8@CYP4B1	ENST00000371923.8	protein_coding	46799046,46810808,46811140,46812496,46813482,46813909,46814209,46815074,46817048,46817965,46818131,46818631	46799261,46810949,46811184,46812623,46813606,46814063,46814315,46815264,46817181,46818029,46818213,46819349	Gene ID= ENSG00000142973.13 TPM= 469.58 Transcript Type= protein_coding
chr1	46799064	46819349	46799064	46819349	+	ENST00000464439.6@CYP4B1	ENST00000464439.6	protein_coding	46799064,46810808,46811140,46812496,46813482,46813982,46814209,46815074,46817048,46817965,46818131,46818631	46799261,46810949,46811184,46812623,46813606,46814063,46814315,46815264,46817181,46818029,46818213,46819349	Gene ID= ENSG00000142973.13 TPM= 34.16 Transcript Type= nonsense_mediated_decay
chr1	46869132	46872373	46869132	46872373	+	transcript5443.chr1.nnic@NA	transcript5443.chr1.nnic	NA	46869132	46872373	Gene ID= novel_gene_chr1_5444 TPM= 4.67 Transcript Type= NA
chr1	47023568	47050751	47023568	47050751	+	ENST00000371901.3@CYP4X1	ENST00000371901.3	protein_coding	47023568,47029990,47031436,47033241,47035806,47036017,47038660,47039342,47046467,47048565,47049422,47050000	47023994,47030131,47031480,47033368,47035933,47036171,47038766,47039532,47046600,47048629,47049504,47050751	Gene ID= ENSG00000186377.7 TPM= 10.51 Transcript Type= protein_coding
chr1	47067488	47118319	47067488	47118319	+	ENST00000334194.3@CYP4Z1	ENST00000334194.3	protein_coding	47067488,47068622,47080623,47082334,47084620,47084824,47094566,47099094,47106128,47115529,47116650,47117766	47067667,47068763,47080667,47082461,47084744,47084978,47094669,47099284,47106261,47115593,47116732,47118319	Gene ID= ENSG00000186160.4 TPM= 1.17 Transcript Type= protein_coding
chr1	47183593	47190055	47183593	47190055	-	ENST00000294338.6@PDZK1IP1	ENST00000294338.6	protein_coding	47189866,47187319,47185002,47183593	47190055,47187427,47185097,47184043	Gene ID= ENSG00000162366.7 TPM= 25.69 Transcript Type= protein_coding
chr1	47183593	47190007	47183593	47190007	-	ENST00000489919.1@PDZK1IP1	ENST00000489919.1	protein_coding	47189866,47185002,47183593	47190007,47185097,47184043	Gene ID= ENSG00000162366.7 TPM= 5.84 Transcript Type= processed_transcript
chr1	47230530	47231886	47230530	47231886	+	transcript5458.chr1.nnic@NA	transcript5458.chr1.nnic	NA	47230530	47231886	Gene ID= novel_gene_chr1_5459 TPM= 3.5 Transcript Type= NA
chr1	47333797	47378839	47333797	47378839	+	ENST00000371873.9@CMPK1	ENST00000371873.9	protein_coding	47333797,47368469,47372955,47374909,47375197,47376704	47334116,47368615,47373107,47374985,47375293,47378839	Gene ID= ENSG00000162368.13 TPM= 400.48 Transcript Type= protein_coding
chr1	47432133	47437671	47432133	47437671	-	transcript5476.chr1.nnic@FOXD2-AS1	transcript5476.chr1.nnic	antisense_RNA	47437089,47436109,47432133	47437671,47436233,47434641	Gene ID= ENSG00000237424.1 TPM= 2.72 Transcript Type= NA
chr1	47432133	47437669	47432133	47437669	-	transcript5477.chr1.nnic@FOXD2-AS1	transcript5477.chr1.nnic	antisense_RNA	47437290,47436109,47432133	47437669,47436233,47434641	Gene ID= ENSG00000237424.1 TPM= 2.72 Transcript Type= NA
chr1	47432137	47437655	47432137	47437655	-	transcript5478.chr1.nnic@FOXD2-AS1	transcript5478.chr1.nnic	antisense_RNA	47437290,47432137	47437655,47434641	Gene ID= ENSG00000237424.1 TPM= 2.72 Transcript Type= NA
chr1	47436017	47440691	47436017	47440691	+	ENST00000334793.5@FOXD2	ENST00000334793.5	protein_coding	47436017	47440691	Gene ID= ENSG00000186564.5 TPM= 7.01 Transcript Type= protein_coding
chr1	48212021	48248638	48212021	48248638	+	transcript5485.chr1.nnic@SLC5A9	transcript5485.chr1.nnic	protein_coding	48212021,48222087,48222664,48224724,48228850,48229103,48229295,48230600,48231545,48231946,48232367,48233655,48235729,48237679,48239322,48242457,48247335	48212108,48222177,48222898,48224795,48228954,48229165,48229459,48230705,48231625,48232151,48232502,48233762,48235879,48237847,48239537,48242616,48248638	Gene ID= ENSG00000117834.12 TPM= 3.5 Transcript Type= NA
chr1	48222685	48248640	48222685	48248640	+	ENST00000438567.6@SLC5A9	ENST00000438567.6	protein_coding	48222685,48224724,48228850,48229295,48230600,48231545,48231946,48232367,48233655,48235729,48237679,48239322,48242457,48247335	48222898,48224795,48228954,48229459,48230705,48231625,48232151,48232502,48233762,48235879,48237847,48239537,48242616,48248640	Gene ID= ENSG00000117834.12 TPM= 3.5 Transcript Type= protein_coding
chr1	48260553	48472204	48260553	48472204	-	transcript5493.chr1.nnic@SPATA6	transcript5493.chr1.nnic	protein_coding	48471958,48452994,48451552,48411464,48403802,48399351,48395267,48385309,48359586,48355670,48305787,48260553	48472204,48453131,48451600,48411588,48403882,48399644,48395354,48385349,48359770,48355769,48305878,48261668	Gene ID= ENSG00000132122.11 TPM= 2.34 Transcript Type= NA
chr1	48727867	48777039	48727867	48777039	-	transcript5502.chr1.nic@BEND5	transcript5502.chr1.nic	protein_coding	48776606,48761337,48758900,48736239,48727867	48777039,48761470,48759284,48736452,48728043	Gene ID= ENSG00000162373.12 TPM= 2.34 Transcript Type= NA
chr1	50960745	50974633	50960745	50974633	+	ENST00000262662.5@CDKN2C	ENST00000262662.5	protein_coding	50960745,50967936,50970358,50973893	50960803,50969899,50970497,50974633	Gene ID= ENSG00000123080.10 TPM= 11.68 Transcript Type= protein_coding
chr1	51236271	51273455	51236271	51273455	+	ENST00000242719.3@RNF11	ENST00000242719.3	protein_coding	51236271,51269956,51271151	51236879,51270125,51273455	Gene ID= ENSG00000123091.4 TPM= 29.19 Transcript Type= protein_coding
chr1	51287146	51330760	51287146	51330760	-	transcript5534.chr1.nic@TTC39A	transcript5534.chr1.nic	protein_coding	51330437,51321721,51312812,51312119,51311254,51309261,51305977,51305081,51303084,51302506,51302357,51301572,51296079,51294391,51290514,51290005,51288839,51287146	51330760,51321825,51312943,51312195,51311321,51309325,51306076,51305146,51303192,51302573,51302416,51301733,51296170,51294511,51290625,51290119,51288955,51288280	Gene ID= ENSG00000085831.15 TPM= 3.5 Transcript Type= NA
chr1	51287258	51330556	51287258	51330556	-	transcript5540.chr1.nic@TTC39A	transcript5540.chr1.nic	protein_coding	51330437,51321721,51312812,51312119,51311254,51309261,51305977,51305081,51303084,51302506,51302357,51301572,51296079,51294391,51290514,51290005,51288839,51287258	51330556,51321825,51312943,51312195,51311321,51309430,51306076,51305146,51303192,51302573,51302416,51301733,51296170,51294511,51290625,51290119,51288955,51288280	Gene ID= ENSG00000085831.15 TPM= 3.79 Transcript Type= NA
chr1	51287258	51345135	51287258	51345135	-	transcript5541.chr1.nic@TTC39A	transcript5541.chr1.nic	protein_coding	51344991,51321721,51312812,51312119,51311254,51309261,51305977,51305081,51303084,51302506,51302357,51301572,51296079,51294391,51290514,51290005,51288839,51287258	51345135,51321825,51312943,51312195,51311321,51309430,51306076,51305146,51303192,51302573,51302416,51301733,51296170,51294511,51290625,51290119,51288955,51288280	Gene ID= ENSG00000085831.15 TPM= 3.79 Transcript Type= NA
chr1	51287258	51345116	51287258	51345116	-	ENST00000413473.6@TTC39A	ENST00000413473.6	protein_coding	51344991,51321721,51312812,51312119,51311254,51309261,51305977,51305081,51303084,51302506,51302357,51301572,51296079,51294391,51290514,51290005,51288839,51287258	51345116,51321825,51312943,51312195,51311321,51309325,51306076,51305146,51303192,51302573,51302416,51301733,51296170,51294511,51290625,51290119,51288955,51288280	Gene ID= ENSG00000085831.15 TPM= 11.97 Transcript Type= protein_coding
chr1	51617092	51788398	51617092	51788398	+	transcript5575.chr1.nnic@OSBPL9	transcript5575.chr1.nnic	protein_coding	51617092,51640823,51651991,51669434,51714003,51745536,51746710,51748369,51750145,51756320,51760690,51761867,51765822,51772070,51772605,51776833,51781164,51782559,51783915,51784264,51784442,51785808,51786526,51787353,51787715	51617221,51640926,51652041,51669512,51714079,51745631,51746757,51748398,51750195,51756358,51760780,51761971,51765981,51772182,51772723,51776918,51781335,51782643,51784025,51784327,51784582,51785886,51786617,51787488,51788398	Gene ID= ENSG00000117859.18 TPM= 2.34 Transcript Type= NA
chr1	51577179	51788469	51577179	51788469	+	ENST00000371714.5@OSBPL9	ENST00000371714.5	protein_coding	51577179,51598124,51614305,51616874,51651991,51669434,51714003,51745536,51746710,51748369,51750145,51760690,51761867,51765822,51772070,51772605,51776833,51781164,51782559,51783915,51784264,51784442,51785808,51786526,51787353,51787715	51577256,51598193,51614419,51617221,51652041,51669512,51714079,51745631,51746757,51748398,51750195,51760780,51761971,51765981,51772182,51772723,51776918,51781335,51782643,51784025,51784327,51784582,51785886,51786617,51787488,51788469	Gene ID= ENSG00000117859.18 TPM= 3.7 Transcript Type= protein_coding
chr1	51729838	51788469	51729838	51788469	+	transcript5587.chr1.nic@OSBPL9	transcript5587.chr1.nic	protein_coding	51729838,51745536,51746710,51748369,51750145,51756320,51760690,51761867,51765822,51772070,51772605,51776833,51781164,51782559,51783915,51784264,51784442,51785808,51786526,51787353,51787715	51730001,51745631,51746757,51748398,51750195,51756358,51760780,51761971,51765981,51772182,51772723,51776918,51781335,51782643,51784025,51784327,51784582,51785886,51786617,51787488,51788469	Gene ID= ENSG00000117859.18 TPM= 4.87 Transcript Type= NA
chr1	51729815	51788469	51729815	51788469	+	ENST00000361556.9@OSBPL9	ENST00000361556.9	protein_coding	51729815,51745536,51746710,51748369,51750145,51760690,51761867,51765822,51772070,51772605,51776833,51781164,51782559,51783915,51784264,51784442,51785808,51786526,51787353,51787715	51730001,51745631,51746757,51748398,51750195,51760780,51761971,51765981,51772182,51772723,51776918,51781335,51782643,51784025,51784327,51784582,51785886,51786617,51787488,51788469	Gene ID= ENSG00000117859.18 TPM= 1.37 Transcript Type= protein_coding
chr1	51617109	51788469	51617109	51788469	+	ENST00000428468.5@OSBPL9	ENST00000428468.5	protein_coding	51617109,51651991,51669434,51714003,51745536,51746710,51748369,51750145,51756320,51760690,51761867,51765822,51772070,51772605,51776833,51781164,51782559,51783915,51784264,51784442,51785808,51786526,51787353,51787715	51617221,51652041,51669512,51714079,51745631,51746757,51748398,51750195,51756358,51760780,51761971,51765981,51772182,51772723,51776918,51781335,51782643,51784025,51784327,51784582,51785886,51786617,51787488,51788469	Gene ID= ENSG00000117859.18 TPM= 9.54 Transcript Type= protein_coding
chr1	51617092	51788469	51617092	51788469	+	ENST00000495776.5@OSBPL9	ENST00000495776.5	protein_coding	51617092,51651991,51714003,51745536,51746710,51748369,51750145,51756320,51760690,51761867,51765822,51772070,51772605,51776833,51781164,51782559,51783915,51784264,51784442,51785808,51786526,51787353,51787715	51617221,51652041,51714079,51745631,51746757,51748398,51750195,51756358,51760780,51761971,51765981,51772182,51772723,51776918,51781335,51782643,51784025,51784327,51784582,51785886,51786617,51787488,51788469	Gene ID= ENSG00000117859.18 TPM= 2.53 Transcript Type= nonsense_mediated_decay
chr1	51729904	51788469	51729904	51788469	+	ENST00000462759.5@OSBPL9	ENST00000462759.5	protein_coding	51729904,51745536,51746710,51748369,51750145,51760690,51761867,51765822,51772070,51772605,51776833,51781164,51782559,51783915,51784264,51784442,51785808,51786526,51787353,51787715	51730124,51745631,51746757,51748398,51750195,51760780,51761971,51765981,51772182,51772723,51776918,51781335,51782643,51784025,51784327,51784582,51785886,51786617,51787488,51788469	Gene ID= ENSG00000117859.18 TPM= 1.37 Transcript Type= protein_coding
chr1	51789191	51878805	51789191	51878805	-	ENST00000354831.11@NRDC	ENST00000354831.11	protein_coding	51878275,51840226,51837487,51836369,51836131,51834017,51827796,51825287,51823664,51821498,51819800,51818066,51816312,51814693,51814551,51814035,51811994,51810281,51809315,51806794,51805510,51803814,51800556,51798249,51794823,51794472,51792377,51792046,51791578,51790900,51790533,51789568,51789191	51878805,51840514,51837620,51836438,51836212,51834170,51827869,51825382,51823786,51821555,51819873,51818135,51816389,51814813,51814609,51814089,51812098,51810404,51809401,51806913,51805561,51803964,51800683,51798411,51794854,51794610,51792424,51792098,51791661,51790990,51790649,51789657,51789433	Gene ID= ENSG00000078618.21 TPM= 11.68 Transcript Type= protein_coding
chr1	51789191	51878805	51789191	51878805	-	ENST00000352171.11@NRDC	ENST00000352171.11	protein_coding	51878275,51840226,51836131,51834017,51827796,51825287,51823664,51821498,51819800,51818066,51816312,51814693,51814551,51814035,51811994,51810281,51809315,51806794,51805510,51803814,51800556,51798249,51794823,51794472,51792377,51792046,51791578,51790900,51790533,51789568,51789191	51878805,51840514,51836212,51834170,51827869,51825382,51823786,51821555,51819873,51818135,51816389,51814813,51814609,51814089,51812098,51810404,51809401,51806913,51805561,51803964,51800683,51798411,51794854,51794610,51792424,51792098,51791661,51790990,51790649,51789657,51789433	Gene ID= ENSG00000078618.21 TPM= 105.08 Transcript Type= protein_coding
chr1	51815175	51878789	51815175	51878789	-	transcript5595.chr1.nic@NRDC	transcript5595.chr1.nic	protein_coding	51878275,51840226,51836131,51834017,51827796,51825287,51823664,51821498,51819800,51818066,51815175	51878789,51840514,51836212,51834170,51827869,51825382,51823786,51821555,51819873,51818135,51816389	Gene ID= ENSG00000078618.21 TPM= 4.67 Transcript Type= NA
chr1	52020131	52056171	52020131	52056171	-	ENST00000371626.8@TXNDC12	ENST00000371626.8	protein_coding	52055000,52041537,52028578,52027275,52024510,52023491,52020131	52056171,52041597,52028630,52027348,52024579,52023574,52021012	Gene ID= ENSG00000117862.11 TPM= 78.23 Transcript Type= protein_coding
chr1	52032103	52033816	52032103	52033816	-	ENST00000371614.1@KTI12	ENST00000371614.1	protein_coding	52032103	52033816	Gene ID= ENSG00000198841.3 TPM= 24.52 Transcript Type= protein_coding
chr1	52056125	52090716	52056125	52090716	+	ENST00000313334.12@BTF3L4	ENST00000313334.12	protein_coding	52056125,52059835,52064825,52083340,52086112,52086712	52056379,52059901,52064938,52083541,52086171,52090716	Gene ID= ENSG00000134717.17 TPM= 2.34 Transcript Type= protein_coding
chr1	52056304	52088418	52056304	52088418	+	ENST00000472944.6@BTF3L4	ENST00000472944.6	protein_coding	52056304,52064825,52083340,52086112,52086712	52056379,52064938,52083541,52086171,52088418	Gene ID= ENSG00000134717.17 TPM= 8.17 Transcript Type= protein_coding
chr1	52056271	52087155	52056271	52087155	+	ENST00000489308.6@BTF3L4	ENST00000489308.6	protein_coding	52056271,52059835,52064825,52086112,52086712	52056379,52059901,52064938,52086171,52087155	Gene ID= ENSG00000134717.17 TPM= 1.17 Transcript Type= protein_coding
chr1	52352532	52366171	52352532	52366171	-	transcript5627.chr1.nic@CC2D1B	transcript5627.chr1.nic	protein_coding	52366069,52364552,52362602,52361513,52360974,52360424,52360074,52359705,52359459,52359250,52359027,52358686,52358331,52357781,52357526,52357001,52356384,52356186,52355771,52355608,52355398,52354840,52354608,52353518,52352532	52366171,52364634,52362746,52361616,52361132,52360549,52360233,52359883,52359534,52359357,52359157,52358758,52358461,52357916,52357698,52357126,52356442,52356302,52355844,52355666,52355449,52354939,52354698,52353647,52353223	Gene ID= ENSG00000154222.14 TPM= 3.7 Transcript Type= NA
chr1	52352536	52366463	52352536	52366463	-	transcript5633.chr1.nic@CC2D1B	transcript5633.chr1.nic	protein_coding	52366069,52364552,52362602,52361513,52360974,52360424,52360074,52359705,52359459,52359250,52359027,52358686,52358331,52357781,52357526,52357001,52356384,52356186,52355771,52355608,52355398,52354840,52354608,52352536	52366463,52364634,52362746,52361616,52361132,52360549,52360233,52359883,52359534,52359357,52359157,52358758,52358461,52357898,52357698,52357126,52356442,52356302,52355844,52355666,52355449,52354939,52354698,52353647	Gene ID= ENSG00000154222.14 TPM= 4.29 Transcript Type= NA
chr1	52352532	52366179	52352532	52366179	-	ENST00000284376.7@CC2D1B	ENST00000284376.7	protein_coding	52366069,52364552,52362602,52361513,52360974,52360424,52360074,52359705,52359459,52359250,52359027,52358686,52358331,52357781,52357526,52357001,52356384,52356186,52355771,52355608,52355398,52354840,52354608,52353518,52352532	52366179,52364634,52362746,52361616,52361132,52360549,52360233,52359883,52359534,52359357,52359157,52358758,52358461,52357898,52357698,52357126,52356442,52356302,52355844,52355666,52355449,52354939,52354698,52353647,52353223	Gene ID= ENSG00000154222.14 TPM= 81.93 Transcript Type= protein_coding
chr1	52404564	52420839	52404564	52420839	+	ENST00000257181.9@PRPF38A	ENST00000257181.9	protein_coding	52404564,52405680,52408569,52411115,52412514,52413879,52414621,52414762,52415338,52416648	52404879,52405839,52408690,52411200,52412624,52413991,52414647,52414859,52415386,52420839	Gene ID= ENSG00000134748.12 TPM= 4.67 Transcript Type= protein_coding
chr1	52602372	52609051	52602372	52609051	+	ENST00000361314.4@GPX7	ENST00000361314.4	protein_coding	52602372,52606684,52608262	52602547,52606945,52609051	Gene ID= ENSG00000116157.5 TPM= 7.01 Transcript Type= protein_coding
chr1	52647787	52650800	52647787	52650800	-	transcript5652.chr1.nnic@NA	transcript5652.chr1.nnic	NA	52647787	52650800	Gene ID= novel_gene_chr1_5653 TPM= 2.34 Transcript Type= NA
chr1	52684451	52698366	52684451	52698366	-	ENST00000371538.4@COA7	ENST00000371538.4	protein_coding	52698221,52692727,52684451	52698366,52692867,52688168	Gene ID= ENSG00000162377.5 TPM= 2.34 Transcript Type= protein_coding
chr1	52726509	52827342	52726509	52827342	+	ENST00000294353.6@ZYG11B	ENST00000294353.6	protein_coding	52726509,52756458,52771020,52779853,52784877,52790003,52796292,52796734,52801819,52802092,52813536,52813860,52816532,52821439	52726683,52756623,52771774,52779993,52785053,52790067,52796391,52796784,52801980,52802139,52813733,52813912,52816629,52827342	Gene ID= ENSG00000162378.12 TPM= 14.01 Transcript Type= protein_coding
chr1	52896232	52921770	52896232	52921770	-	transcript5680.chr1.nic@ECHDC2	transcript5680.chr1.nic	protein_coding	52921553,52911723,52911566,52907868,52906519,52905034,52904646,52899174,52897437,52896232	52921770,52914095,52911653,52907954,52906611,52905090,52904833,52899224,52897484,52896597	Gene ID= ENSG00000121310.16 TPM= 4.29 Transcript Type= NA
chr1	52896232	52921778	52896232	52921778	-	transcript5691.chr1.nic@ECHDC2	transcript5691.chr1.nic	protein_coding	52921553,52911723,52911566,52907868,52905034,52904646,52899174,52897437,52896232	52921778,52911790,52911653,52907954,52906611,52904833,52899224,52897484,52896597	Gene ID= ENSG00000121310.16 TPM= 10.12 Transcript Type= NA
chr1	52896232	52914874	52896232	52914874	-	transcript5692.chr1.nic@ECHDC2	transcript5692.chr1.nic	protein_coding	52911723,52911566,52907868,52905034,52904646,52899174,52897437,52896232	52914874,52911653,52907954,52905090,52904833,52899224,52897484,52896597	Gene ID= ENSG00000121310.16 TPM= 4.29 Transcript Type= NA
chr1	52896233	52921726	52896233	52921726	-	ENST00000358358.9@ECHDC2	ENST00000358358.9	protein_coding	52921553,52911723,52911566,52907868,52905034,52904646,52899174,52897437,52896233	52921726,52911790,52911653,52907954,52905090,52904833,52899224,52897484,52896597	Gene ID= ENSG00000121310.16 TPM= 16.35 Transcript Type= protein_coding
chr1	52917436	52918385	52917436	52918385	+	transcript5709.chr1.nnic@NA	transcript5709.chr1.nnic	NA	52917436	52918385	Gene ID= novel_gene_chr1_5710 TPM= 10.51 Transcript Type= NA
chr1	52927229	53051703	52927229	53051703	+	ENST00000371514.7@SCP2	ENST00000371514.7	protein_coding	52927229,52941796,52948009,52950755,52954740,52961503,52974769,52976683,52978217,52980396,52988029,53014890,53027969,53038917,53047858,53050609	52927465,52941853,52948080,52950886,52954804,52961629,52974832,52976769,52978367,52980543,52988136,53015043,53028071,53039046,53047937,53051703	Gene ID= ENSG00000116171.17 TPM= 15.96 Transcript Type= protein_coding
chr1	53062182	53085502	53062182	53085502	+	ENST00000371500.7@PODN	ENST00000371500.7	protein_coding	53062182,53063370,53066812,53069801,53071535,53074606,53075862,53077190,53077685,53078365,53080728,53081981,53084513	53062308,53063559,53066867,53070167,53071628,53074670,53075971,53077346,53077800,53079022,53080876,53082188,53085502	Gene ID= ENSG00000174348.13 TPM= 26.27 Transcript Type= protein_coding
chr1	53062207	53085494	53062207	53085494	+	transcript5729.chr1.nic@PODN	transcript5729.chr1.nic	protein_coding	53062207,53069801,53071535,53074606,53075862,53077190,53077685,53078365,53080728,53081981	53062308,53070167,53071628,53074670,53075971,53077346,53077800,53079022,53080876,53085494	Gene ID= ENSG00000174348.13 TPM= 22.18 Transcript Type= NA
chr1	53062213	53085502	53062213	53085502	+	ENST00000312553.9@PODN	ENST00000312553.9	protein_coding	53062213,53069801,53071535,53074606,53075862,53077190,53077685,53078365,53080728,53081981,53084513	53062308,53070167,53071628,53074670,53075971,53077346,53077800,53079022,53080876,53082188,53085502	Gene ID= ENSG00000174348.13 TPM= 98.66 Transcript Type= protein_coding
chr1	53085548	53088719	53085548	53088719	+	transcript5736.chr1.nnic@NA	transcript5736.chr1.nnic	NA	53085548	53088719	Gene ID= novel_gene_chr1_5737 TPM= 8.76 Transcript Type= NA
chr1	53087179	53142632	53087179	53142632	-	ENST00000620347.4@SLC1A7	ENST00000620347.4	protein_coding	53142315,53134350,53114758,53105732,53103346,53093461,53092554,53090612,53089800,53088877,53087179	53142632,53134429,53114973,53105774,53103568,53093560,53092787,53090983,53089934,53088979,53088227	Gene ID= ENSG00000162383.11 TPM= 1.75 Transcript Type= protein_coding
chr1	53196429	53214197	53196429	53214197	+	ENST00000371486.3@CPT2	ENST00000371486.3	protein_coding	53196429,53200719,53202323,53210015,53213264	53197095,53200799,53202429,53211319,53214197	Gene ID= ENSG00000157184.6 TPM= 50.21 Transcript Type= protein_coding
chr1	53196800	53214177	53196800	53214177	+	ENST00000637252.1@CPT2	ENST00000637252.1	protein_coding	53196800,53200719,53202323,53210015,53212781,53213264	53197095,53200799,53202429,53211319,53212816,53214177	Gene ID= ENSG00000157184.6 TPM= 3.5 Transcript Type= protein_coding
chr1	53196792	53214178	53196792	53214178	+	ENST00000636867.1@CPT2	ENST00000636867.1	protein_coding	53196792,53200719,53202323,53210015,53213264	53197095,53200799,53202429,53211250,53214178	Gene ID= ENSG00000157184.6 TPM= 2.34 Transcript Type= protein_coding
chr1	53214099	53220617	53214099	53220617	-	ENST00000294360.4@C1orf123	ENST00000294360.4	protein_coding	53220570,53220261,53218867,53218414,53218172,53216782,53215991,53214099	53220617,53220344,53218923,53218495,53218203,53216859,53216056,53214736	Gene ID= ENSG00000162384.13 TPM= 35.03 Transcript Type= protein_coding
chr1	53226892	53238610	53226892	53238610	-	ENST00000371470.7@MAGOH	ENST00000371470.7	protein_coding	53238361,53235577,53233542,53228872,53226892	53238610,53235635,53233652,53228954,53227144	Gene ID= ENSG00000162385.10 TPM= 10.51 Transcript Type= protein_coding
chr1	53226926	53238499	53226926	53238499	-	ENST00000371466.4@MAGOH	ENST00000371466.4	protein_coding	53238361,53235577,53228872,53226926	53238499,53235635,53228954,53227144	Gene ID= ENSG00000162385.10 TPM= 5.84 Transcript Type= protein_coding
chr1	53245547	53328107	53245547	53328107	-	transcript5759.chr1.nic@LRP8	transcript5759.chr1.nic	protein_coding	53327789,53326873,53289567,53280587,53276692,53275631,53272604,53271227,53271028,53266473,53264169,53262446,53262068,53260464,53258319,53257240,53255117,53250690,53249380,53245547	53328107,53326992,53289689,53280715,53277078,53275753,53272642,53271346,53271153,53266647,53264396,53262564,53262207,53260605,53258471,53257464,53255185,53250862,53249556,53247056	Gene ID= ENSG00000157193.15 TPM= 2.92 Transcript Type= NA
chr1	53245543	53328107	53245543	53328107	-	transcript5761.chr1.nic@LRP8	transcript5761.chr1.nic	protein_coding	53327789,53326873,53289567,53280587,53276692,53275631,53272604,53271227,53271028,53266473,53264169,53262446,53262068,53260464,53258319,53257240,53255117,53250690,53245543	53328107,53326992,53289689,53280715,53277078,53275753,53272642,53271346,53271153,53266647,53264396,53262564,53262207,53260605,53258471,53257464,53255185,53250862,53247056	Gene ID= ENSG00000157193.15 TPM= 5.25 Transcript Type= NA
chr1	53246553	53328054	53246553	53328054	-	ENST00000371454.6@LRP8	ENST00000371454.6	protein_coding	53327789,53326873,53289567,53280587,53276692,53275631,53271227,53271028,53266473,53264169,53262446,53262068,53260464,53258319,53257240,53255117,53250690,53246553	53328054,53326992,53289689,53280715,53277078,53275753,53271346,53271153,53266647,53264396,53262564,53262207,53260605,53258471,53257464,53255185,53250862,53247056	Gene ID= ENSG00000157193.15 TPM= 2.34 Transcript Type= protein_coding
chr1	53506237	53734204	53506237	53734204	-	ENST00000312233.4@GLIS1	ENST00000312233.4	protein_coding	53733904,53600101,53594108,53529791,53524777,53520634,53514625,53509849,53509120,53506237	53734204,53600278,53594990,53529952,53524887,53520766,53514781,53510027,53509287,53506776	Gene ID= ENSG00000174332.5 TPM= 1.17 Transcript Type= protein_coding
chr1	53765460	53838860	53765460	53838860	-	ENST00000371429.3@NDC1	ENST00000371429.3	protein_coding	53838205,53835500,53832490,53827999,53825798,53818971,53809695,53807656,53806425,53803928,53800693,53796899,53796689,53793229,53789133,53787158,53772329,53765460	53838860,53835620,53832591,53828173,53825936,53819079,53809746,53807791,53806517,53804009,53800848,53797144,53796804,53793279,53789196,53787258,53772489,53768033	Gene ID= ENSG00000058804.11 TPM= 7.01 Transcript Type= protein_coding
chr1	53851719	53889846	53851719	53889846	-	transcript5777.chr1.nic@YIPF1	transcript5777.chr1.nic	protein_coding	53889713,53889244,53888907,53883113,53882943,53878642,53878315,53871372,53866758,53866200,53860056,53855001,53851719	53889846,53889463,53888986,53883276,53883031,53878722,53878402,53871488,53866924,53866382,53860153,53855051,53852270	Gene ID= ENSG00000058799.14 TPM= 2.34 Transcript Type= NA
chr1	53851719	53889846	53851719	53889846	-	transcript5778.chr1.nic@YIPF1	transcript5778.chr1.nic	protein_coding	53889713,53889244,53888907,53883113,53878642,53878315,53871372,53866758,53866200,53860056,53855001,53851719	53889846,53889463,53888986,53883276,53878722,53878402,53871488,53866924,53866382,53860153,53855051,53852270	Gene ID= ENSG00000058799.14 TPM= 17.51 Transcript Type= NA
chr1	53851719	53889846	53851719	53889846	-	transcript5780.chr1.nic@YIPF1	transcript5780.chr1.nic	protein_coding	53889713,53889244,53888907,53878642,53878315,53871372,53866758,53866200,53860056,53855001,53851719	53889846,53889463,53888986,53878722,53878402,53871488,53866924,53866382,53860153,53855051,53852270	Gene ID= ENSG00000058799.14 TPM= 2.34 Transcript Type= NA
chr1	53851733	53889810	53851733	53889810	-	transcript5784.chr1.nic@YIPF1	transcript5784.chr1.nic	protein_coding	53889713,53888907,53883113,53878642,53878315,53871372,53866758,53866200,53860056,53851733	53889810,53888986,53883276,53878722,53878402,53871488,53866924,53866382,53860153,53852270	Gene ID= ENSG00000058799.14 TPM= 4.67 Transcript Type= NA
chr1	53851733	53889834	53851733	53889834	-	ENST00000072644.6@YIPF1	ENST00000072644.6	protein_coding	53889713,53889244,53888907,53883113,53878642,53878315,53871372,53866758,53866200,53860056,53851733	53889834,53889463,53888986,53883276,53878722,53878402,53871488,53866924,53866382,53860153,53852270	Gene ID= ENSG00000058799.14 TPM= 7.01 Transcript Type= protein_coding
chr1	53851719	53889733	53851719	53889733	-	ENST00000464950.6@YIPF1	ENST00000464950.6	protein_coding	53889713,53888907,53883113,53878642,53878315,53871372,53866758,53866200,53860056,53855001,53851719	53889733,53888986,53883276,53878722,53878402,53871488,53866924,53866382,53860153,53855051,53852270	Gene ID= ENSG00000058799.14 TPM= 4.67 Transcript Type= nonsense_mediated_decay
chr1	53911200	53916193	53911200	53916193	+	transcript5785.chr1.nnic@NA	transcript5785.chr1.nnic	NA	53911200	53916193	Gene ID= novel_gene_chr1_5786 TPM= 2.34 Transcript Type= NA
chr1	53921561	53945929	53921561	53945929	-	ENST00000194214.9@HSPB11	ENST00000194214.9	protein_coding	53945555,53939985,53930039,53928372,53923904,53921561	53945929,53940097,53930145,53928440,53923947,53921767	Gene ID= ENSG00000081870.11 TPM= 5.84 Transcript Type= protein_coding
chr1	53946077	53968168	53946077	53968168	+	ENST00000371370.7@LRRC42	ENST00000371370.7	protein_coding	53946077,53947788,53951986,53958149,53960356,53962034,53962296,53966296,53967665	53946549,53947821,53952472,53958280,53960474,53962122,53962409,53966380,53968168	Gene ID= ENSG00000116212.14 TPM= 12.26 Transcript Type= protein_coding
chr1	53946345	53968168	53946345	53968168	+	transcript5795.chr1.nic@LRRC42	transcript5795.chr1.nic	protein_coding	53946345,53947862,53951986,53958149,53960356,53962034,53962296,53966296,53967665	53946549,53947981,53952472,53958280,53960474,53962122,53962409,53966380,53968168	Gene ID= ENSG00000116212.14 TPM= 8.76 Transcript Type= NA
chr1	53946654	53968168	53946654	53968168	+	transcript5796.chr1.nnic@LRRC42	transcript5796.chr1.nnic	protein_coding	53946654,53947788,53951986,53958149,53960356,53962034,53962296,53966296,53967665	53946688,53947821,53952472,53958280,53960474,53962122,53962409,53966380,53968168	Gene ID= ENSG00000116212.14 TPM= 4.09 Transcript Type= NA
chr1	53946328	53968168	53946328	53968168	+	transcript5799.chr1.nnic@LRRC42	transcript5799.chr1.nnic	protein_coding	53946328,53951986,53958149,53960356,53962296,53966296,53967665	53946549,53952472,53958280,53960474,53962409,53966380,53968168	Gene ID= ENSG00000116212.14 TPM= 2.34 Transcript Type= NA
chr1	53946328	53968168	53946328	53968168	+	transcript5800.chr1.nnic@LRRC42	transcript5800.chr1.nnic	protein_coding	53946328,53951986,53960356,53962034,53962296,53966296,53967665	53946549,53952472,53960474,53962122,53962409,53966380,53968168	Gene ID= ENSG00000116212.14 TPM= 2.34 Transcript Type= NA
chr1	53946353	53968168	53946353	53968168	+	ENST00000319223.8@LRRC42	ENST00000319223.8	protein_coding	53946353,53951986,53958149,53960356,53962034,53962296,53966296,53967665	53946549,53952472,53958280,53960474,53962122,53962409,53966380,53968168	Gene ID= ENSG00000116212.14 TPM= 9.92 Transcript Type= protein_coding
chr1	54031966	54053504	54031966	54053504	-	ENST00000371341.5@TMEM59	ENST00000371341.5	protein_coding	54053356,54047267,54045692,54043373,54041724,54040756,54036610,54031966	54053504,54047372,54045786,54043525,54041805,54040837,54036718,54032305	Gene ID= ENSG00000116209.11 TPM= 3.5 Transcript Type= protein_coding
chr1	54053601	54106082	54053601	54106082	+	ENST00000234827.5@TCEANC2	ENST00000234827.5	protein_coding	54053601,54054381,54068756,54088597,54096285	54053758,54054524,54068897,54088790,54106082	Gene ID= ENSG00000116205.12 TPM= 3.5 Transcript Type= protein_coding
chr1	54172336	54200027	54172336	54200027	-	transcript5818.chr1.nic@CYB5RL	transcript5818.chr1.nic	protein_coding	54199976,54196369,54195419,54190748,54187652,54184161,54179149,54172336	54200027,54196491,54195715,54190896,54187739,54184265,54179352,54174822	Gene ID= ENSG00000215883.10 TPM= 10.51 Transcript Type= NA
chr1	54172356	54200011	54172356	54200011	-	ENST00000490863.5@CYB5RL	ENST00000490863.5	protein_coding	54199976,54196369,54195419,54190738,54187652,54184161,54179149,54172356	54200011,54196491,54195715,54190896,54187882,54186286,54179352,54174822	Gene ID= ENSG00000215883.10 TPM= 1.17 Transcript Type= retained_intron
chr1	54200167	54218383	54200167	54218383	+	ENST00000360840.9@MRPL37	ENST00000360840.9	protein_coding	54200167,54205018,54205295,54209946,54212501,54216141,54218172	54200589,54205201,54205410,54210131,54212658,54216344,54218383	Gene ID= ENSG00000116221.15 TPM= 56.63 Transcript Type= protein_coding
chr1	54200167	54218381	54200167	54218381	+	ENST00000336230.10@MRPL37	ENST00000336230.10	protein_coding	54200167,54209948,54212501,54216141,54218172	54200589,54210131,54212658,54216344,54218381	Gene ID= ENSG00000116221.15 TPM= 9.34 Transcript Type= protein_coding
chr1	54200196	54225464	54200196	54225464	+	ENST00000605337.5@MRPL37	ENST00000605337.5	protein_coding	54200196,54205018,54205295,54209946,54212501,54216141,54225125	54200589,54205201,54205410,54210131,54212658,54216344,54225464	Gene ID= ENSG00000116221.15 TPM= 1.75 Transcript Type= protein_coding
chr1	54226639	54242256	54226639	54242256	-	transcript5829.chr1.nic@SSBP3	transcript5829.chr1.nic	protein_coding	54242164,54241474,54240905,54239129,54228748,54228449,54228255,54226639	54242256,54241509,54240959,54239199,54228826,54228477,54228356,54227160	Gene ID= ENSG00000157216.15 TPM= 5.84 Transcript Type= NA
chr1	54226517	54228834	54226517	54228834	-	ENST00000528930.5@SSBP3	ENST00000528930.5	protein_coding	54228748,54228449,54228255,54226517	54228834,54228477,54228356,54227160	Gene ID= ENSG00000157216.15 TPM= 3.5 Transcript Type= retained_intron
chr1	54225574	54227084	54225574	54227084	-	transcript5839.chr1.nnic@NA	transcript5839.chr1.nnic	NA	54225574	54227084	Gene ID= novel_gene_chr1_5840 TPM= 7.01 Transcript Type= NA
chr1	54542112	54611072	54542112	54611072	+	transcript5842.chr1.nic@ACOT11	transcript5842.chr1.nic	protein_coding	54542112,54584655,54585835,54592546,54593941,54594556,54597259,54599296,54601269,54602669,54603871,54604346,54605076,54607134,54607942,54608957	54542437,54584862,54585904,54592606,54594039,54594691,54597415,54599415,54601413,54602724,54603937,54604429,54605209,54607265,54608068,54611072	Gene ID= ENSG00000162390.17 TPM= 2.34 Transcript Type= NA
chr1	54715822	54742657	54715822	54742657	+	ENST00000371281.3@TTC4	ENST00000371281.3	protein_coding	54715822,54716600,54717492,54721163,54722675,54728346,54731486,54733629,54737582,54741411	54716019,54716717,54717653,54721240,54722799,54728432,54731700,54733710,54737664,54742657	Gene ID= ENSG00000243725.6 TPM= 50.21 Transcript Type= protein_coding
chr1	54738663	54741032	54738663	54741032	-	transcript5852.chr1.nnic@NA	transcript5852.chr1.nnic	NA	54738663	54741032	Gene ID= novel_gene_chr1_5853 TPM= 4.67 Transcript Type= NA
chr1	54756898	54764514	54756898	54764514	-	ENST00000371279.3@PARS2	ENST00000371279.3	protein_coding	54764461,54756898	54764514,54759190	Gene ID= ENSG00000162396.5 TPM= 22.18 Transcript Type= protein_coding
chr1	54779712	54801267	54779712	54801267	-	ENST00000371276.8@TTC22	ENST00000371276.8	protein_coding	54800597,54788042,54787711,54786957,54785983,54782325,54779712	54801267,54788097,54787826,54787075,54786144,54782477,54781779	Gene ID= ENSG00000006555.10 TPM= 18.68 Transcript Type= protein_coding
chr1	54849633	54887218	54849633	54887218	-	ENST00000371269.7@DHCR24	ENST00000371269.7	protein_coding	54886889,54883618,54875942,54875093,54871350,54865303,54854037,54853434,54849633	54887218,54883773,54876047,54875211,54871613,54865446,54854234,54853612,54852386	Gene ID= ENSG00000116133.11 TPM= 1115.81 Transcript Type= protein_coding
chr1	54987337	54992285	54987337	54992285	+	transcript5877.chr1.nnic@NA	transcript5877.chr1.nnic	NA	54987337	54992285	Gene ID= novel_gene_chr1_5878 TPM= 2.34 Transcript Type= NA
chr1	55039548	55064852	55039548	55064852	+	ENST00000302118.5@PCSK9	ENST00000302118.5	protein_coding	55039548,55043843,55046523,55052278,55052650,55055993,55057331,55058036,55058499,55059486,55061375,55063369	55040044,55044034,55046646,55052411,55052791,55056189,55057514,55058209,55058647,55059663,55061556,55064852	Gene ID= ENSG00000169174.10 TPM= 82.9 Transcript Type= protein_coding
chr1	56494747	56579568	56494747	56579568	-	ENST00000371250.3@PLPP3	ENST00000371250.3	protein_coding	56578878,56536955,56524277,56523823,56511976,56494747	56579568,56537112,56524554,56523880,56512152,56496676	Gene ID= ENSG00000162407.8 TPM= 141.28 Transcript Type= protein_coding
chr1	56562329	56565514	56562329	56565514	+	transcript5904.chr1.nnic@NA	transcript5904.chr1.nnic	NA	56562329	56565514	Gene ID= novel_gene_chr1_5905 TPM= 3.5 Transcript Type= NA
chr1	56570586	56574211	56570586	56574211	+	transcript5906.chr1.nnic@NA	transcript5906.chr1.nnic	NA	56570586	56574211	Gene ID= novel_gene_chr1_5907 TPM= 3.5 Transcript Type= NA
chr1	56645329	56648040	56645329	56648040	+	transcript5908.chr1.nnic@NA	transcript5908.chr1.nnic	NA	56645329	56648040	Gene ID= novel_gene_chr1_5909 TPM= 2.34 Transcript Type= NA
chr1	56707575	56712864	56707575	56712864	+	transcript5912.chr1.nnic@NA	transcript5912.chr1.nnic	NA	56707575	56712864	Gene ID= novel_gene_chr1_5913 TPM= 2.34 Transcript Type= NA
chr1	56707653	56709054	56707653	56709054	+	transcript5910.chr1.nnic@NA	transcript5910.chr1.nnic	NA	56707653	56709054	Gene ID= novel_gene_chr1_5911 TPM= 2.34 Transcript Type= NA
chr1	58480719	58546742	58480719	58546742	-	transcript5922.chr1.nic@OMA1	transcript5922.chr1.nic	protein_coding	58546664,58538795,58536513,58534158,58533953,58530601,58527261,58506060,58480719	58546742,58539310,58536741,58534331,58534060,58530729,58527335,58506209,58481174	Gene ID= ENSG00000162600.11 TPM= 9.92 Transcript Type= NA
chr1	58480719	58546800	58480719	58546800	-	ENST00000371226.7@OMA1	ENST00000371226.7	protein_coding	58546703,58538795,58536513,58534158,58533953,58530601,58527261,58506060,58480719	58546800,58539310,58536741,58534331,58534060,58530729,58527335,58506209,58481174	Gene ID= ENSG00000162600.11 TPM= 9.92 Transcript Type= protein_coding
chr1	58575423	58577773	58575423	58577773	-	ENST00000371225.3@TACSTD2	ENST00000371225.3	protein_coding	58575423	58577773	Gene ID= ENSG00000184292.6 TPM= 467.04 Transcript Type= protein_coding
chr1	58654739	58700092	58654739	58700092	-	ENST00000472487.5@MYSM1	ENST00000472487.5	protein_coding	58699985,58695129,58692861,58690340,58690226,58689038,58685153,58681785,58676926,58675477,58673573,58671870,58668984,58668632,58667847,58667038,58665499,58661406,58661170,58654739	58700092,58695207,58692931,58690417,58690249,58689116,58685251,58682545,58677056,58675580,58673650,58671958,58669038,58668682,58667921,58667226,58665631,58661511,58661227,58660155	Gene ID= ENSG00000162601.9 TPM= 8.17 Transcript Type= protein_coding
chr1	58686087	58686976	58686087	58686976	+	transcript5937.chr1.nnic@NA	transcript5937.chr1.nnic	NA	58686087	58686976	Gene ID= novel_gene_chr1_5938 TPM= 2.34 Transcript Type= NA
chr1	58780788	58784327	58780788	58784327	-	ENST00000371222.3@JUN	ENST00000371222.3	protein_coding	58780788	58784327	Gene ID= ENSG00000177606.6 TPM= 26.85 Transcript Type= protein_coding
chr1	59296991	59762730	59296991	59762730	+	ENST00000303721.11@FGGY	ENST00000303721.11	protein_coding	59296991,59321536,59339958,59346247,59378749,59456961,59512311,59554124,59607803,59625988,59638228,59660219,59667283,59674039,59757931,59762503	59297150,59321750,59340069,59346398,59378837,59457076,59512439,59554227,59607910,59626049,59638375,59660293,59667403,59674133,59757992,59762730	Gene ID= ENSG00000172456.17 TPM= 12.26 Transcript Type= protein_coding
chr1	59296791	59762727	59296791	59762727	+	transcript5951.chr1.nic@FGGY	transcript5951.chr1.nic	protein_coding	59296791,59339958,59346247,59378749,59456961,59512311,59554124,59607803,59625988,59638228,59660219,59667283,59674039,59757931,59762503	59296907,59340069,59346398,59378837,59457076,59512439,59554227,59607910,59626049,59638375,59660293,59667403,59674133,59757992,59762727	Gene ID= ENSG00000172456.17 TPM= 15.76 Transcript Type= NA
chr1	59814861	59876378	59814861	59876378	+	ENST00000371208.3@HOOK1	ENST00000371208.3	protein_coding	59814861,59821858,59828780,59832163,59833405,59835345,59836873,59840308,59843432,59847045,59848315,59849073,59858428,59858985,59860188,59862784,59864632,59865163,59865872,59868250,59871042,59872795	59815180,59821943,59828852,59832213,59833537,59835412,59836935,59840391,59843598,59847185,59848516,59849183,59858515,59859045,59860328,59862877,59864666,59865245,59865972,59868351,59871110,59876378	Gene ID= ENSG00000134709.10 TPM= 4.67 Transcript Type= protein_coding
chr1	61082308	61462793	61082308	61462793	+	ENST00000403491.7@NFIA	ENST00000403491.7	protein_coding	61082308,61088149,61277520,61332512,61352450,61359147,61383237,61404104,61406562,61426465,61455303	61082818,61088680,61277585,61332586,61352567,61359274,61383365,61404282,61406727,61426556,61462793	Gene ID= ENSG00000162599.15 TPM= 206.08 Transcript Type= protein_coding
chr1	61082621	61456394	61082621	61456394	+	ENST00000371187.7@NFIA	ENST00000371187.7	protein_coding	61082621,61088149,61277520,61332512,61352450,61359147,61383237,61404104,61406562,61455303	61082818,61088680,61277585,61332586,61352567,61359274,61383365,61404282,61406727,61456394	Gene ID= ENSG00000162599.15 TPM= 7.59 Transcript Type= protein_coding
chr1	61100941	61104587	61100941	61104587	-	transcript5971.chr1.nnic@NA	transcript5971.chr1.nnic	NA	61100941	61104587	Gene ID= novel_gene_chr1_5972 TPM= 3.5 Transcript Type= NA
chr1	61358380	61369115	61358380	61369115	-	transcript5969.chr1.nnic@NA	transcript5969.chr1.nnic	NA	61366890,61363544,61358380	61369115,61363892,61359591	Gene ID= novel_gene_chr1_5970 TPM= 2.34 Transcript Type= NA
chr1	61681046	61725163	61681046	61725163	-	transcript5973.chr1.nnic@TM2D1	transcript5973.chr1.nnic	protein_coding	61724957,61723713,61709329,61700934,61694697,61690081,61686792,61683417,61681046	61725163,61723786,61709437,61701025,61694770,61690131,61686921,61683546,61681350	Gene ID= ENSG00000162604.12 TPM= 2.34 Transcript Type= NA
chr1	61681046	61725163	61681046	61725163	-	transcript5975.chr1.nic@TM2D1	transcript5975.chr1.nic	protein_coding	61724957,61723713,61709329,61700934,61694697,61686792,61683417,61681046	61725163,61723786,61709437,61701025,61694770,61686921,61683546,61681350	Gene ID= ENSG00000162604.12 TPM= 8.17 Transcript Type= NA
chr1	61681049	61725423	61681049	61725423	-	ENST00000371180.6@TM2D1	ENST00000371180.6	protein_coding	61724957,61723713,61709329,61700934,61694697,61683417,61681049	61725423,61723786,61709437,61701025,61694770,61683546,61681350	Gene ID= ENSG00000162604.12 TPM= 31.53 Transcript Type= protein_coding
chr1	61681046	61725163	61681046	61725163	-	transcript5978.chr1.nic@TM2D1	transcript5978.chr1.nic	protein_coding	61724957,61723713,61709329,61700934,61694697,61686792,61681046	61725163,61723786,61709437,61701025,61694770,61686921,61683546	Gene ID= ENSG00000162604.12 TPM= 15.76 Transcript Type= NA
chr1	61681046	61725163	61681046	61725163	-	transcript5983.chr1.nic@TM2D1	transcript5983.chr1.nic	protein_coding	61724957,61723713,61709329,61700934,61694697,61681046	61725163,61723786,61709437,61701025,61694770,61683546	Gene ID= ENSG00000162604.12 TPM= 20.43 Transcript Type= NA
chr1	61742494	62117393	61742494	62117393	+	transcript5992.chr1.nic@PATJ	transcript5992.chr1.nic	protein_coding	61742494,61762858,61763013,61766279,61769283,61771431,61775206,61787754,61791348,61795467,61797287,61801623,61805448,61808474,61822945,61827422,61833654,61856030,61861551,61864238,61875243,61884237,61899583,61901282,61908372,61914587,61927730,61990168,62017856,62037977,62050966,62079450,62084515,62108437,62114053,62116532,62117132	61742555,61762914,61763179,61766473,61769422,61771626,61775334,61787972,61791447,61795558,61797428,61801769,61805524,61808530,61823079,61827583,61833785,61856239,61861667,61864633,61875366,61884408,61899654,61901459,61908482,61914664,61927829,61990364,62017947,62038049,62051058,62079567,62084648,62108520,62114246,62116679,62117393	Gene ID= ENSG00000132849.19 TPM= 2.34 Transcript Type= NA
chr1	61742417	61928936	61742417	61928936	+	transcript5997.chr1.nic@PATJ	transcript5997.chr1.nic	protein_coding	61742417,61762858,61763013,61766279,61769283,61771431,61775206,61787754,61791348,61795467,61797287,61801623,61805448,61808474,61822945,61827422,61833654,61856030,61861551,61864238,61875243,61884237,61899583,61901282,61908372,61914587,61927730	61742555,61762914,61763179,61766473,61769422,61771626,61775334,61787972,61791447,61795558,61797428,61801769,61805524,61808530,61823079,61827583,61833785,61856239,61861667,61864633,61875366,61884408,61899654,61901459,61908482,61914664,61928936	Gene ID= ENSG00000132849.19 TPM= 2.34 Transcript Type= NA
chr1	61742477	62114925	61742477	62114925	+	ENST00000484562.5@PATJ	ENST00000484562.5	protein_coding	61742477,61762858,61763013,61766279,61769283,61771431,61775206,61787754,61791348,61795467,61797287,61801623,61805448,61808474,61822945,61827422,61833654,61856030,61861551,61864238,61875243,61884237,61899583,61901282,61908372,61914587,61927730,61990168,62017856,62037977,62050966,62079450,62084515,62108437,62114053	61742555,61762914,61763179,61766473,61769422,61771626,61775334,61787972,61791447,61795558,61797428,61801769,61805524,61808530,61823079,61827583,61833785,61856239,61861667,61864633,61875366,61884408,61899654,61901459,61908482,61914664,61927829,61990364,62017947,62038049,62051058,62079567,62084648,62108520,62114925	Gene ID= ENSG00000132849.19 TPM= 2.34 Transcript Type= retained_intron
chr1	62194831	62212328	62194831	62212328	+	ENST00000498273.1@L1TD1	ENST00000498273.1	protein_coding	62194831,62196435,62206519,62209783	62194921,62196528,62207636,62212328	Gene ID= ENSG00000240563.1 TPM= 1.17 Transcript Type= protein_coding
chr1	62436655	62451804	62436655	62451804	+	ENST00000339950.4@USP1	ENST00000339950.4	protein_coding	62436655,62439799,62441488,62442195,62443159,62444738,62447341,62448465,62450246	62437400,62440037,62441608,62442299,62443319,62445429,62447511,62448666,62451804	Gene ID= ENSG00000162607.12 TPM= 11.09 Transcript Type= protein_coding
chr1	62436304	62451802	62436304	62451802	+	ENST00000371146.5@USP1	ENST00000371146.5	protein_coding	62436304,62439799,62441488,62442195,62443159,62444738,62447341,62448465,62450246	62436562,62440037,62441608,62442299,62443319,62445429,62447511,62448666,62451802	Gene ID= ENSG00000162607.12 TPM= 4.09 Transcript Type= protein_coding
chr1	62455010	62688353	62455010	62688353	-	transcript6018.chr1.nnic@DOCK7	transcript6018.chr1.nnic	protein_coding	62688227,62663025,62653984,62653725,62648415,62648106,62647691,62636537,62634773,62633498,62631240,62625259,62619900,62618706,62586507,62583184,62578828,62577262,62561617,62558989,62555825,62552732,62543656,62542608,62539752,62539545,62537891,62535493,62529277,62528151,62513716,62513471,62510577,62507962,62505682,62504630,62496339,62495581,62494275,62492704,62488934,62487398,62477700,62476067,62475707,62475208,62473982,62457538,62455010	62688353,62663130,62654159,62653793,62648544,62648318,62647776,62636603,62634922,62633578,62631405,62625401,62619993,62618868,62586624,62583254,62578966,62577363,62561703,62559220,62555989,62552901,62543745,62542703,62539892,62539658,62538061,62535632,62529446,62528305,62513898,62513606,62510673,62508058,62505816,62504782,62496497,62495681,62494467,62492847,62489065,62487412,62477834,62476156,62475943,62475351,62474088,62457705,62455456	Gene ID= ENSG00000116641.17 TPM= 2.34 Transcript Type= NA
chr1	62584105	62688368	62584105	62688368	-	ENST00000404627.3@DOCK7	ENST00000404627.3	protein_coding	62688227,62663025,62653984,62653725,62648415,62648106,62647691,62636537,62634773,62633498,62631240,62625259,62619900,62618706,62586507,62584105	62688368,62663130,62654159,62653793,62648544,62648318,62647776,62636603,62634922,62633578,62631405,62625401,62619993,62618868,62586624,62584878	Gene ID= ENSG00000116641.17 TPM= 1.17 Transcript Type= protein_coding
chr1	63367635	63437177	63367635	63437177	+	transcript6038.chr1.nic@ALG6	transcript6038.chr1.nic	protein_coding	63367635,63370771,63396513,63402254,63404453,63406317,63407062,63411146,63411926,63415873,63419370,63428733,63428928,63436823	63367687,63371059,63396597,63402343,63404541,63406399,63407126,63411331,63414146,63415957,63419440,63428801,63429126,63437177	Gene ID= ENSG00000088035.15 TPM= 2.34 Transcript Type= NA
chr1	63370770	63437177	63370770	63437177	+	ENST00000263440.4@ALG6	ENST00000263440.4	protein_coding	63370770,63396513,63402254,63404453,63406317,63407062,63411140,63411926,63414061,63415873,63419370,63428733,63428928,63436823	63371059,63396597,63402343,63404541,63406399,63407126,63411331,63412061,63414146,63415957,63419440,63428801,63429126,63437177	Gene ID= ENSG00000088035.15 TPM= 1.17 Transcript Type= protein_coding
chr1	63440773	63523502	63440773	63523502	-	ENST00000489099.5@ITGB3BP	ENST00000489099.5	protein_coding	63523129,63508528,63490083,63478764,63454890,63454380,63453918,63447565,63446806,63440773	63523502,63508570,63490218,63478833,63454968,63454473,63453974,63447614,63446856,63441103	Gene ID= ENSG00000142856.16 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr1	63440773	63523215	63440773	63523215	-	ENST00000271002.14@ITGB3BP	ENST00000271002.14	protein_coding	63523129,63508528,63490083,63478764,63454890,63454380,63453918,63446806,63440773	63523215,63508570,63490218,63478833,63454968,63454473,63453974,63446856,63441103	Gene ID= ENSG00000142856.16 TPM= 3.5 Transcript Type= protein_coding
chr1	63593809	63660241	63593809	63660241	+	ENST00000540265.5@PGM1	ENST00000540265.5	protein_coding	63593809,63629425,63629942,63631657,63634829,63636234,63638685,63648517,63651669,63654332,63659586	63594144,63629587,63630088,63631782,63635019,63636388,63638800,63648652,63651852,63654466,63660241	Gene ID= ENSG00000079739.15 TPM= 2.92 Transcript Type= protein_coding
chr1	63593276	63660245	63593276	63660245	+	ENST00000371084.7@PGM1	ENST00000371084.7	protein_coding	63593276,63629425,63629942,63631657,63634829,63636234,63638685,63648517,63651669,63654332,63659586	63593734,63629587,63630088,63631782,63635019,63636388,63638800,63648652,63651852,63654466,63660245	Gene ID= ENSG00000079739.15 TPM= 134.86 Transcript Type= protein_coding
chr1	64009303	64181492	64009303	64181492	+	ENST00000545203.2@ROR1	ENST00000545203.2	protein_coding	64009303,64049691,64050686,64137369,64140109,64142405,64158981,64177428	64009376,64049978,64050716,64137496,64140426,64142650,64159192,64181492	Gene ID= ENSG00000185483.11 TPM= 22.18 Transcript Type= protein_coding
chr1	63774022	64143385	63774022	64143385	+	ENST00000371080.5@ROR1	ENST00000371080.5	protein_coding	63774022,64009305,64049691,64050686,64137369,64140109,64142405	63774508,64009376,64049978,64050716,64137496,64140426,64143385	Gene ID= ENSG00000185483.11 TPM= 3.5 Transcript Type= protein_coding
chr1	64009302	64139191	64009302	64139191	+	transcript6068.chr1.nic@ROR1	transcript6068.chr1.nic	protein_coding	64009302,64049691,64050686,64137369	64009376,64049978,64050716,64139191	Gene ID= ENSG00000185483.11 TPM= 5.84 Transcript Type= NA
chr1	64138548	64140192	64138548	64140192	-	transcript6072.chr1.nnic@NA	transcript6072.chr1.nnic	NA	64138548	64140192	Gene ID= novel_gene_chr1_6073 TPM= 2.34 Transcript Type= NA
chr1	64470128	64693053	64470128	64693053	+	transcript6077.chr1.nic@CACHD1	transcript6077.chr1.nic	protein_coding	64470128,64550594,64582156,64602806,64629355,64634044,64641820,64647801,64652161,64653758,64654686,64658705,64663695,64664498,64666057,64671564,64673158,64673348,64675401,64675897,64676895,64678159,64679595,64681258,64682005,64691323	64470942,64550656,64582304,64602912,64629481,64634260,64641969,64648034,64652310,64653881,64654803,64658873,64663837,64664679,64666167,64671686,64673257,64673464,64675561,64675983,64677011,64678310,64679756,64681335,64682106,64693053	Gene ID= ENSG00000158966.13 TPM= 9.92 Transcript Type= NA
chr1	64677447	64693053	64677447	64693053	+	transcript6079.chr1.nic@CACHD1	transcript6079.chr1.nic	protein_coding	64677447,64679595,64681258,64682005,64691323	64678310,64679756,64681335,64682106,64693053	Gene ID= ENSG00000158966.13 TPM= 5.25 Transcript Type= NA
chr1	64475173	64477577	64475173	64477577	-	transcript6082.chr1.nnic@NA	transcript6082.chr1.nnic	NA	64475173	64477577	Gene ID= novel_gene_chr1_6083 TPM= 7.01 Transcript Type= NA
chr1	64745095	64833232	64745095	64833232	+	ENST00000371072.8@RAVER2	ENST00000371072.8	protein_coding	64745095,64768656,64777623,64781380,64789388,64802976,64804773,64804991,64807206,64812738,64814704,64830839	64745421,64768722,64778092,64781571,64789514,64803061,64804838,64805105,64807474,64812849,64814840,64833232	Gene ID= ENSG00000162437.14 TPM= 13.43 Transcript Type= protein_coding
chr1	64745095	64833229	64745095	64833229	+	ENST00000294428.7@RAVER2	ENST00000294428.7	protein_coding	64745095,64768656,64777623,64781380,64789388,64802976,64804734,64804991,64807206,64812738,64814704,64830839	64745421,64768722,64778092,64781571,64789514,64803061,64804838,64805105,64807474,64812849,64814840,64833229	Gene ID= ENSG00000162437.14 TPM= 1.75 Transcript Type= protein_coding
chr1	64833229	64966504	64833229	64966504	-	ENST00000342505.4@JAK1	ENST00000342505.4	protein_coding	64966333,64886259,64883277,64879025,64873370,64869311,64866866,64864787,64860105,64857656,64855509,64850804,64847532,64846649,64845513,64844754,64844064,64841451,64841245,64839603,64838465,64837932,64836098,64835396,64833229	64966504,64886341,64883475,64879148,64873523,64869474,64867208,64864972,64860262,64857779,64855698,64850910,64847675,64846736,64845640,64844889,64844215,64841601,64841339,64839795,64838589,64838104,64836215,64835506,64834657	Gene ID= ENSG00000162434.11 TPM= 329.26 Transcript Type= protein_coding
chr1	65147549	65232145	65147549	65232145	+	ENST00000545314.5@AK4	ENST00000545314.5	protein_coding	65147549,65148278,65190710,65218754,65224752,65226063	65147665,65148552,65190829,65218926,65224870,65232145	Gene ID= ENSG00000162433.14 TPM= 7.01 Transcript Type= protein_coding
chr1	65254442	65415276	65254442	65415276	+	transcript6110.chr1.nic@DNAJC6	transcript6110.chr1.nic	protein_coding	65254442,65364635,65365885,65366048,65379402,65384193,65385712,65386812,65388336,65389256,65389547,65392431,65394898,65398813,65401761,65405870,65408641,65411250,65412924	65254649,65364785,65365934,65366196,65379524,65384326,65385906,65386929,65388415,65389449,65389627,65392865,65395032,65398881,65401880,65406133,65408783,65411426,65415276	Gene ID= ENSG00000116675.15 TPM= 8.17 Transcript Type= NA
chr1	65420587	65436007	65420587	65436007	+	ENST00000371065.8@LEPROT	ENST00000371065.8	protein_coding	65420587,65425303,65429862,65431803	65420740,65425378,65430048,65436007	Gene ID= ENSG00000213625.8 TPM= 99.25 Transcript Type= protein_coding
chr1	65420668	65428009	65420668	65428009	+	ENST00000497874.5@LEPROT	ENST00000497874.5	protein_coding	65420668,65425303,65427782	65420740,65425378,65428009	Gene ID= ENSG00000213625.8 TPM= 1.17 Transcript Type= processed_transcript
chr1	65420652	65635428	65420652	65635428	+	ENST00000371060.7@LEPR	ENST00000371060.7	protein_coding	65420652,65425303,65565546,65570473,65572326,65592657,65596448,65598660,65601392,65601843,65605038,65608753,65609947,65610214,65616008,65617964,65619928,65621353,65622906,65633152	65420740,65425378,65565605,65570802,65572449,65592865,65596593,65598804,65601682,65601960,65605237,65608901,65610106,65610296,65616224,65618146,65620023,65621458,65622981,65635428	Gene ID= ENSG00000116678.19 TPM= 10.51 Transcript Type= protein_coding
chr1	65525689	65635409	65525689	65635409	+	ENST00000616738.4@LEPR	ENST00000616738.4	protein_coding	65525689,65565546,65570473,65572326,65592657,65596448,65598660,65601392,65601843,65605038,65608753,65609947,65610214,65616008,65617964,65619928,65621353,65622906,65633152	65525818,65565605,65570802,65572449,65592865,65596593,65598804,65601682,65601960,65605237,65608901,65610106,65610296,65616224,65618146,65620023,65621458,65622981,65635409	Gene ID= ENSG00000116678.19 TPM= 23.35 Transcript Type= protein_coding
chr1	66924929	66987676	66924929	66987676	+	transcript6150.chr1.nnic@MIER1	transcript6150.chr1.nnic	protein_coding	66924929,66926142,66940028,66946150,66958059,66958851,66959679,66963088,66970808,66971655,66972897,66976595,66981779,66987389	66925095,66926242,66940052,66946295,66958220,66958983,66959743,66963160,66970959,66971736,66972991,66976722,66981833,66987676	Gene ID= ENSG00000198160.14 TPM= 3.5 Transcript Type= NA
chr1	66924957	66988031	66924957	66988031	+	ENST00000357692.6@MIER1	ENST00000357692.6	protein_coding	66924957,66926142,66928887,66940028,66946150,66958059,66958851,66959679,66963088,66970808,66971655,66972897,66976595,66981779,66984572	66925095,66926242,66928963,66940052,66946295,66958220,66958983,66959743,66963160,66970959,66971736,66972991,66976722,66981918,66988031	Gene ID= ENSG00000198160.14 TPM= 60.71 Transcript Type= protein_coding
chr1	67407810	67430415	67407810	67430415	-	ENST00000370994.8@SERBP1	ENST00000370994.8	protein_coding	67429988,67426135,67425083,67424888,67424200,67420009,67415166,67407810	67430415,67426285,67425223,67424959,67424277,67420186,67415339,67413263	Gene ID= ENSG00000142864.14 TPM= 9.34 Transcript Type= protein_coding
chr1	67411038	67430386	67411038	67430386	-	ENST00000370995.6@SERBP1	ENST00000370995.6	protein_coding	67429988,67426135,67425083,67424888,67424200,67420009,67415166,67411038	67430386,67426285,67425223,67424977,67424322,67420186,67415339,67413263	Gene ID= ENSG00000142864.14 TPM= 75.89 Transcript Type= protein_coding
chr1	67412867	67430372	67412867	67430372	-	ENST00000370990.5@SERBP1	ENST00000370990.5	protein_coding	67429988,67426135,67425083,67424888,67424200,67420009,67415166,67412867	67430372,67426285,67425223,67424959,67424322,67420186,67415339,67413263	Gene ID= ENSG00000142864.14 TPM= 18.68 Transcript Type= protein_coding
chr1	67685061	67688338	67685061	67688338	+	ENST00000370986.8@GADD45A	ENST00000370986.8	protein_coding	67685061,67686025,67686350,67687661	67685538,67686126,67686587,67688338	Gene ID= ENSG00000116717.11 TPM= 21.02 Transcript Type= protein_coding
chr1	67701542	67832112	67701542	67832112	-	transcript6192.chr1.nnic@GNG12	transcript6192.chr1.nnic	protein_coding	67831819,67777458,67707594,67701542	67832112,67777507,67707712,67705576	Gene ID= ENSG00000172380.5 TPM= 8.17 Transcript Type= NA
chr1	67701466	67833467	67701466	67833467	-	ENST00000370982.3@GNG12	ENST00000370982.3	protein_coding	67833344,67777458,67707594,67701466	67833467,67777507,67707712,67705576	Gene ID= ENSG00000172380.5 TPM= 40.87 Transcript Type= protein_coding
chr1	68045962	68051631	68045962	68051631	-	ENST00000370981.1@DIRAS3	ENST00000370981.1	protein_coding	68051425,68050884,68050548,68045962	68051631,68050997,68050798,68047362	Gene ID= ENSG00000162595.5 TPM= 3.5 Transcript Type= protein_coding
chr1	68098473	68232574	68098473	68232574	-	transcript6198.chr1.nic@WLS	transcript6198.chr1.nic	protein_coding	68232194,68193955,68159123,68155099,68153517,68150188,68148563,68148136,68145869,68144569,68137780,68098473	68232574,68194227,68159247,68155260,68153653,68150356,68148660,68148199,68146012,68144652,68137933,68098753	Gene ID= ENSG00000116729.13 TPM= 13.23 Transcript Type= NA
chr1	68098473	68232545	68098473	68232545	-	ENST00000354777.6@WLS	ENST00000354777.6	protein_coding	68232194,68193955,68159123,68155099,68153517,68150188,68148563,68148136,68145869,68144569,68137780,68098473	68232545,68194221,68159247,68155260,68153653,68150356,68148660,68148199,68146012,68144652,68137933,68098753	Gene ID= ENSG00000116729.13 TPM= 13.23 Transcript Type= protein_coding
chr1	68125358	68232553	68125358	68232553	-	ENST00000262348.8@WLS	ENST00000262348.8	protein_coding	68232194,68193955,68159123,68155099,68153517,68150188,68148563,68148136,68145869,68144569,68137780,68125358	68232553,68194227,68159247,68155260,68153653,68150356,68148660,68148199,68146012,68144652,68137933,68126335	Gene ID= ENSG00000116729.13 TPM= 7.39 Transcript Type= protein_coding
chr1	68190988	68192956	68190988	68192956	+	transcript6204.chr1.nnic@NA	transcript6204.chr1.nnic	NA	68190988	68192956	Gene ID= novel_gene_chr1_6205 TPM= 2.34 Transcript Type= NA
chr1	70144805	70205620	70144805	70205620	-	ENST00000370952.3@LRRC40	ENST00000370952.3	protein_coding	70205390,70189092,70187265,70184785,70181086,70178851,70175810,70173622,70173465,70159330,70155689,70152433,70151128,70148487,70144805	70205620,70189273,70187338,70184914,70181209,70178993,70175982,70173709,70173510,70159438,70155796,70152543,70151205,70148672,70145905	Gene ID= ENSG00000066557.5 TPM= 23.35 Transcript Type= protein_coding
chr1	70221362	70252001	70221362	70252001	+	transcript6224.chr1.nic@SRSF11	transcript6224.chr1.nic	protein_coding	70221362,70228422,70231859,70232268,70234696,70235501,70237425,70239439,70244684,70246818,70249952,70250365,70250608	70221839,70228555,70231975,70232377,70234788,70235550,70237552,70239520,70244815,70246907,70250047,70250503,70252001	Gene ID= ENSG00000116754.13 TPM= 5.84 Transcript Type= NA
chr1	70221362	70252001	70221362	70252001	+	transcript6240.chr1.nic@SRSF11	transcript6240.chr1.nic	protein_coding	70221362,70228422,70232268,70234696,70235501,70237425,70239439,70244684,70246818,70249952,70250365,70250608	70221839,70231975,70232377,70234788,70235550,70237552,70239520,70244815,70246907,70250047,70250503,70252001	Gene ID= ENSG00000116754.13 TPM= 5.25 Transcript Type= NA
chr1	70205682	70251617	70205682	70251617	+	ENST00000370951.5@SRSF11	ENST00000370951.5	protein_coding	70205682,70221615,70228422,70232268,70234696,70235501,70237425,70239439,70244684,70246818,70249952,70250365,70250611	70205780,70221839,70228555,70232377,70234788,70235550,70237552,70239520,70244815,70246907,70250047,70250503,70251617	Gene ID= ENSG00000116754.13 TPM= 2.34 Transcript Type= protein_coding
chr1	70218272	70221206	70218272	70221206	+	transcript6255.chr1.nnic@NA	transcript6255.chr1.nnic	NA	70218272	70221206	Gene ID= novel_gene_chr1_6256 TPM= 2.34 Transcript Type= NA
chr1	70221378	70226202	70221378	70226202	+	transcript6253.chr1.nnic@NA	transcript6253.chr1.nnic	NA	70221378	70226202	Gene ID= novel_gene_chr1_6254 TPM= 7.01 Transcript Type= NA
chr1	70274001	70354730	70274001	70354730	-	transcript6270.chr1.nic@ANKRD13C	transcript6270.chr1.nic	protein_coding	70353979,70336058,70324853,70315481,70313745,70306224,70300764,70296130,70292388,70276765,70274001	70354730,70336099,70324957,70315566,70313790,70306290,70300908,70296261,70292549,70276844,70274818	Gene ID= ENSG00000118454.12 TPM= 2.92 Transcript Type= NA
chr1	70260588	70354722	70260588	70354722	-	ENST00000370944.8@ANKRD13C	ENST00000370944.8	protein_coding	70353979,70336058,70324853,70315481,70313745,70306224,70300764,70296130,70292388,70276765,70274720,70270856,70260588	70354722,70336099,70324957,70315566,70313790,70306290,70300908,70296261,70292549,70276844,70274818,70270956,70262847	Gene ID= ENSG00000118454.12 TPM= 7.01 Transcript Type= protein_coding
chr1	70352807	70354722	70352807	70354722	-	transcript6272.chr1.nnic@NA	transcript6272.chr1.nnic	NA	70352807	70354722	Gene ID= novel_gene_chr1_6273 TPM= 4.09 Transcript Type= NA
chr1	70354836	70368021	70354836	70368021	+	ENST00000370940.5@HHLA3	ENST00000370940.5	protein_coding	70354836,70366444,70367617	70355111,70366537,70368021	Gene ID= ENSG00000197568.13 TPM= 1.17 Transcript Type= protein_coding
chr1	70411272	70439570	70411272	70439570	+	ENST00000370938.7@CTH	ENST00000370938.7	protein_coding	70411272,70415956,70417937,70421566,70424285,70429794,70430317,70432083,70433828,70435125,70438688,70439101	70411583,70416037,70418032,70421675,70424416,70429851,70430394,70432235,70433949,70435177,70438826,70439570	Gene ID= ENSG00000116761.11 TPM= 1.17 Transcript Type= protein_coding
chr1	70970781	71047788	70970781	71047788	-	ENST00000306666.9@PTGER3	ENST00000306666.9	protein_coding	71046681,71012305,70974297,70970781	71047788,71012484,70974388,70971733	Gene ID= ENSG00000050628.20 TPM= 11.68 Transcript Type= protein_coding
chr1	71063297	71081048	71063297	71081048	-	transcript6290.chr1.nic@ZRANB2	transcript6290.chr1.nic	protein_coding	71080940,71078656,71078457,71076795,71072472,71072121,71069276,71066776,71065678,71063297	71081048,71078708,71078565,71076877,71072548,71072255,71070996,71066934,71065752,71065137	Gene ID= ENSG00000132485.13 TPM= 4.09 Transcript Type= NA
chr1	71063297	71081035	71063297	71081035	-	transcript6291.chr1.nic@ZRANB2	transcript6291.chr1.nic	protein_coding	71080940,71078656,71078457,71076795,71072472,71072121,71070827,71069276,71065678,71063297	71081035,71078708,71078565,71076877,71072548,71072255,71070996,71069362,71066934,71065137	Gene ID= ENSG00000132485.13 TPM= 6.42 Transcript Type= NA
chr1	71067878	71081313	71067878	71081313	-	transcript6304.chr1.nic@ZRANB2	transcript6304.chr1.nic	protein_coding	71080940,71078656,71078457,71076795,71072472,71072121,71067878	71081313,71078708,71078565,71076877,71072548,71072255,71070996	Gene ID= ENSG00000132485.13 TPM= 18.68 Transcript Type= NA
chr1	71063337	71081011	71063337	71081011	-	ENST00000254821.10@ZRANB2	ENST00000254821.10	protein_coding	71080940,71078656,71078457,71076795,71072472,71072121,71070827,71069276,71066776,71065678,71063337	71081011,71078708,71078565,71076877,71072548,71072255,71070996,71069362,71066934,71065752,71065137	Gene ID= ENSG00000132485.13 TPM= 26.85 Transcript Type= protein_coding
chr1	71403741	71935314	71403741	71935314	-	transcript6312.chr1.nic@NEGR1	transcript6312.chr1.nic	protein_coding	71935079,71776172,71698008,71611026,71592817,71403741	71935314,71776297,71698139,71611146,71592968,71407570	Gene ID= ENSG00000172260.14 TPM= 10.12 Transcript Type= NA
chr1	74198212	74207234	74198212	74207234	+	ENST00000370898.7@FPGT	ENST00000370898.7	protein_coding	74198212,74199664,74201318,74204391	74198360,74199831,74201410,74207234	Gene ID= ENSG00000254685.6 TPM= 18.68 Transcript Type= protein_coding
chr1	74198226	74206450	74198226	74206450	+	transcript6328.chr1.nnic@FPGT-TNNI3K	transcript6328.chr1.nnic	protein_coding	74198226,74199664,74201318,74203913	74198360,74199831,74203503,74206450	Gene ID= ENSG00000259030.6 TPM= 2.34 Transcript Type= NA
chr1	74705490	74733408	74705490	74733408	-	ENST00000417775.5@CRYZ	ENST00000417775.5	protein_coding	74732956,74730382,74724711,74723118,74719209,74714579,74710098,74707103,74706899,74705490	74733408,74730420,74724834,74723270,74719372,74714630,74710247,74707204,74706994,74706457	Gene ID= ENSG00000116791.13 TPM= 4.67 Transcript Type= protein_coding
chr1	74721598	74727482	74721598	74727482	-	transcript6345.chr1.nic@CRYZ	transcript6345.chr1.nic	protein_coding	74724711,74721598	74727482,74723270	Gene ID= ENSG00000116791.13 TPM= 10.51 Transcript Type= NA
chr1	74705486	74733030	74705486	74733030	-	ENST00000340866.9@CRYZ	ENST00000340866.9	protein_coding	74732956,74724711,74723118,74719209,74714579,74710098,74707103,74706899,74705486	74733030,74724834,74723270,74719372,74714630,74710247,74707204,74706994,74706457	Gene ID= ENSG00000116791.13 TPM= 43.2 Transcript Type= protein_coding
chr1	74733156	74766674	74733156	74766674	+	ENST00000370867.7@TYW3	ENST00000370867.7	protein_coding	74733156,74736542,74738690,74748751,74752292,74763894	74733418,74736622,74738788,74748822,74752425,74766674	Gene ID= ENSG00000162623.15 TPM= 11.68 Transcript Type= protein_coding
chr1	75724351	75763679	75724351	75763679	+	ENST00000370841.8@ACADM	ENST00000370841.8	protein_coding	75724351,75728401,75732644,75732853,75733528,75734791,75739980,75745806,75749419,75750451,75761122,75762692	75724817,75728488,75732741,75732922,75733628,75734871,75740110,75745914,75749559,75750546,75761370,75763679	Gene ID= ENSG00000117054.13 TPM= 25.69 Transcript Type= protein_coding
chr1	75724347	75763679	75724347	75763679	+	ENST00000541113.5@ACADM	ENST00000541113.5	protein_coding	75724347,75732644,75732853,75733528,75734791,75739980,75745806,75749419,75750451,75761122,75762692	75724817,75732741,75732922,75733628,75734871,75740110,75745914,75749559,75750546,75761370,75763679	Gene ID= ENSG00000117054.13 TPM= 4.67 Transcript Type= protein_coding
chr1	75786223	75795079	75786223	75795079	+	transcript6355.chr1.nnic@RABGGTB	transcript6355.chr1.nnic	protein_coding	75786223,75787497,75789159,75789952,75790446,75791285,75791461,75792197,75794084,75794510	75786274,75787604,75789356,75790274,75790517,75791337,75791571,75792306,75794233,75795079	Gene ID= ENSG00000137955.15 TPM= 2.72 Transcript Type= NA
chr1	75786201	75795079	75786201	75795079	+	ENST00000319942.7@RABGGTB	ENST00000319942.7	protein_coding	75786201,75787497,75789159,75789952,75791285,75791461,75792181,75794084,75794510	75786274,75787604,75789356,75790057,75791337,75791571,75792306,75794233,75795079	Gene ID= ENSG00000137955.15 TPM= 31.91 Transcript Type= protein_coding
chr1	75786223	75795079	75786223	75795079	+	transcript6365.chr1.nnic@RABGGTB	transcript6365.chr1.nnic	protein_coding	75786223,75787497,75790446,75791285,75791461,75792197,75794084,75794510	75786274,75790274,75790517,75791337,75791571,75792306,75794233,75795079	Gene ID= ENSG00000137955.15 TPM= 2.72 Transcript Type= NA
chr1	75786197	75794833	75786197	75794833	+	ENST00000496055.5@RABGGTB	ENST00000496055.5	protein_coding	75786197,75787497,75791285,75791461,75792181,75794084,75794510	75786274,75790517,75791337,75791571,75792306,75794233,75794833	Gene ID= ENSG00000137955.15 TPM= 14.01 Transcript Type= processed_transcript
chr1	76074719	76634601	76074719	76634601	+	ENST00000328299.3@ST6GALNAC3	ENST00000328299.3	protein_coding	76074719,76313805,76412008,76627452,76628620	76074884,76313999,76412417,76627559,76634601	Gene ID= ENSG00000184005.10 TPM= 3.5 Transcript Type= protein_coding
chr1	76867323	77065706	76867323	77065706	+	transcript6387.chr1.nnic@ST6GALNAC5	transcript6387.chr1.nnic	protein_coding	76867323,76868497,77062975	76867690,76868742,77065706	Gene ID= ENSG00000117069.14 TPM= 2.34 Transcript Type= NA
chr1	76867480	77064058	76867480	77064058	+	ENST00000318803.6@ST6GALNAC5	ENST00000318803.6	protein_coding	76867480,76868497,77044204,77050262,77062975	76867690,76868742,77044613,77050365,77064058	Gene ID= ENSG00000117069.14 TPM= 12.84 Transcript Type= nonsense_mediated_decay
chr1	76867441	77065711	76867441	77065711	+	ENST00000477717.5@ST6GALNAC5	ENST00000477717.5	protein_coding	76867441,76868497,77044204,77050258,77062975	76867690,76868742,77044613,77050365,77065711	Gene ID= ENSG00000117069.14 TPM= 5.84 Transcript Type= protein_coding
chr1	77088990	77219426	77088990	77219426	-	ENST00000370812.7@PIGK	ENST00000370812.7	protein_coding	77219310,77210436,77206640,77169260,77166719,77163846,77161594,77161295,77154449,77122275,77088990	77219426,77210489,77206731,77169395,77166830,77163942,77161711,77161405,77154621,77122359,77092490	Gene ID= ENSG00000142892.14 TPM= 14.01 Transcript Type= protein_coding
chr1	77129114	77129668	77129114	77129668	+	ENST00000471722.1@AC113935.1	ENST00000471722.1	processed_pseudogene	77129114	77129668	Gene ID= ENSG00000226084.5 TPM= 5.84 Transcript Type= processed_pseudogene
chr1	77564506	77683478	77564506	77683478	-	transcript6401.chr1.nic@ZZZ3	transcript6401.chr1.nic	protein_coding	77683262,77641522,77641384,77639449,77631850,77584517,77581979,77581776,77580998,77579527,77578774,77576068,77568332,77566081,77564506	77683478,77641655,77641446,77639602,77633405,77584655,77582126,77581888,77581069,77579628,77578869,77576220,77568466,77566181,77565784	Gene ID= ENSG00000036549.12 TPM= 9.34 Transcript Type= NA
chr1	77564506	77683478	77564506	77683478	-	transcript6411.chr1.nic@ZZZ3	transcript6411.chr1.nic	protein_coding	77683262,77641522,77639449,77631850,77584517,77581979,77581776,77580998,77579527,77578774,77576068,77568332,77566081,77564506	77683478,77641655,77639602,77633405,77584655,77582126,77581891,77581069,77579628,77578869,77576220,77568466,77566181,77565784	Gene ID= ENSG00000036549.12 TPM= 3.5 Transcript Type= NA
chr1	77639902	77683422	77639902	77683422	-	transcript6417.chr1.nic@ZZZ3	transcript6417.chr1.nic	protein_coding	77683262,77639902	77683422,77641655	Gene ID= ENSG00000036549.12 TPM= 2.34 Transcript Type= NA
chr1	77564500	77682658	77564500	77682658	-	ENST00000370801.7@ZZZ3	ENST00000370801.7	protein_coding	77682585,77641522,77641384,77639449,77631850,77584517,77581979,77581776,77580998,77579527,77578774,77576068,77568332,77566081,77564500	77682658,77641655,77641446,77639602,77633405,77584655,77582126,77581891,77581069,77579628,77578869,77576220,77568466,77566181,77565784	Gene ID= ENSG00000036549.12 TPM= 10.51 Transcript Type= protein_coding
chr1	77695987	77759873	77695987	77759873	-	transcript6420.chr1.nic@USP33	transcript6420.chr1.nic	protein_coding	77759643,77745421,77741617,77741376,77740877,77739265,77736056,77734347,77730618,77729860,77728295,77725622,77723331,77722024,77721831,77721172,77718596,77717867,77715742,77714614,77713200,77711747,77701369,77697863,77695987	77759873,77745599,77741748,77741429,77740939,77739417,77736158,77734416,77730731,77729938,77728712,77725762,77723443,77722196,77721901,77721205,77718641,77718047,77715868,77714783,77713281,77711855,77701471,77697931,77697474	Gene ID= ENSG00000077254.14 TPM= 12.18 Transcript Type= NA
chr1	77695987	77759894	77695987	77759894	-	transcript6425.chr1.nic@USP33	transcript6425.chr1.nic	protein_coding	77759643,77741617,77741376,77740877,77739265,77736056,77734347,77730618,77729860,77728295,77725622,77723331,77722024,77721831,77721172,77718596,77717867,77715742,77714614,77713200,77711747,77701369,77697863,77695987	77759894,77741748,77741429,77740939,77739417,77736158,77734416,77730731,77729938,77728712,77725762,77723443,77722196,77721901,77721205,77718641,77718047,77715868,77714783,77713281,77711855,77701471,77697931,77697474	Gene ID= ENSG00000077254.14 TPM= 29.31 Transcript Type= NA
chr1	77695987	77759843	77695987	77759843	-	transcript6436.chr1.nic@USP33	transcript6436.chr1.nic	protein_coding	77759643,77741617,77741376,77740877,77739265,77736056,77734347,77730618,77729860,77728295,77725622,77721831,77721172,77718596,77717867,77715742,77714614,77713200,77711747,77701369,77697863,77695987	77759843,77741748,77741429,77740939,77739417,77736158,77734416,77730731,77729938,77728712,77725762,77723443,77721205,77718641,77718047,77715868,77714783,77713281,77711855,77701471,77697931,77697474	Gene ID= ENSG00000077254.14 TPM= 3.62 Transcript Type= NA
chr1	77695987	77759894	77695987	77759894	-	transcript6439.chr1.nic@USP33	transcript6439.chr1.nic	protein_coding	77759643,77741617,77741376,77740877,77739265,77736056,77734347,77730618,77729860,77728295,77725622,77721172,77718596,77717867,77715742,77714614,77713200,77711747,77701369,77697863,77695987	77759894,77741748,77741429,77740939,77739417,77736158,77734416,77730731,77729938,77728712,77725762,77723443,77718641,77718047,77715868,77714783,77713281,77711855,77701471,77697931,77697474	Gene ID= ENSG00000077254.14 TPM= 3.62 Transcript Type= NA
chr1	77711652	77759815	77711652	77759815	-	transcript6441.chr1.nic@USP33	transcript6441.chr1.nic	protein_coding	77759643,77741617,77741376,77740877,77739265,77736056,77734347,77730618,77729860,77728295,77725622,77723331,77722024,77721831,77721172,77718596,77717867,77715742,77714614,77713200,77711652	77759815,77741748,77741429,77740939,77739417,77736158,77734416,77730731,77729938,77728712,77725762,77723443,77722196,77721901,77721205,77718641,77718047,77715868,77714783,77713281,77711855	Gene ID= ENSG00000077254.14 TPM= 3.5 Transcript Type= NA
chr1	77695987	77759852	77695987	77759852	-	ENST00000370794.7@USP33	ENST00000370794.7	protein_coding	77759643,77741617,77741376,77740877,77739265,77736056,77734347,77730618,77729860,77728295,77725622,77723331,77722024,77721831,77721172,77718596,77717867,77715742,77714614,77713200,77711747,77701369,77697863,77695987	77759852,77741748,77741429,77740939,77739417,77736158,77734416,77730731,77729938,77728712,77725762,77723443,77722196,77721925,77721205,77718641,77718047,77715868,77714783,77713281,77711855,77701471,77697931,77697474	Gene ID= ENSG00000077254.14 TPM= 83.02 Transcript Type= protein_coding
chr1	77695991	77759852	77695991	77759852	-	ENST00000370793.5@USP33	ENST00000370793.5	protein_coding	77759643,77745421,77741617,77741376,77740877,77739265,77736056,77734347,77730618,77729860,77728295,77725622,77723331,77722024,77721831,77721172,77718596,77717867,77715742,77714614,77713200,77711747,77701369,77697863,77695991	77759852,77745599,77741748,77741429,77740939,77739417,77736158,77734416,77730731,77729938,77728712,77725762,77723443,77722196,77721925,77721205,77718641,77718047,77715868,77714783,77713281,77711855,77701471,77697931,77697474	Gene ID= ENSG00000077254.14 TPM= 28.52 Transcript Type= protein_coding
chr1	77779624	77878421	77779624	77878421	+	ENST00000370791.7@MIGA1	ENST00000370791.7	protein_coding	77779624,77783238,77801331,77803270,77806975,77813734,77815108,77843307,77858938,77859314,77860040,77861224,77863894,77866338,77873004,77874846	77779736,77783351,77801508,77803406,77807101,77813867,77815231,77843407,77859056,77859386,77860126,77861322,77864028,77866391,77873120,77878421	Gene ID= ENSG00000180488.14 TPM= 4.67 Transcript Type= protein_coding
chr1	77887224	77888090	77887224	77888090	-	transcript6510.chr1.nnic@NA	transcript6510.chr1.nnic	NA	77887224	77888090	Gene ID= novel_gene_chr1_6511 TPM= 2.34 Transcript Type= NA
chr1	77888626	77943895	77888626	77943895	+	transcript6474.chr1.nnic@NEXN	transcript6474.chr1.nnic	protein_coding	77888626,77916055,77917960,77918125,77925188,77926414,77926716,77929316,77933282,77935823,77942023,77942461,77943478	77888759,77916133,77918038,77918273,77925229,77926611,77926892,77929504,77933479,77936044,77942208,77942694,77943895	Gene ID= ENSG00000162614.18 TPM= 2.34 Transcript Type= NA
chr1	77888535	77943891	77888535	77943891	+	transcript6475.chr1.nic@NEXN	transcript6475.chr1.nic	protein_coding	77888535,77916055,77917566,77917960,77918125,77926414,77926716,77929316,77933282,77935823,77942023,77942461	77888759,77916133,77917757,77918038,77918273,77926611,77926892,77929504,77933479,77936044,77942208,77943891	Gene ID= ENSG00000162614.18 TPM= 2.34 Transcript Type= NA
chr1	77888613	77943224	77888613	77943224	+	transcript6482.chr1.nnic@NEXN	transcript6482.chr1.nnic	protein_coding	77888613,77916055,77917960,77918125,77925188,77926414,77926716,77929316,77933282,77942023,77942461	77888759,77916133,77918038,77918273,77925229,77926611,77926892,77929504,77933479,77942208,77943224	Gene ID= ENSG00000162614.18 TPM= 2.34 Transcript Type= NA
chr1	77888496	77943891	77888496	77943891	+	transcript6487.chr1.nic@NEXN	transcript6487.chr1.nic	protein_coding	77888496,77916055,77917960,77918125,77926414,77926716,77929316,77933282,77935823,77942023,77942461	77888759,77916133,77918038,77918273,77926611,77926892,77929504,77933479,77936044,77942208,77943891	Gene ID= ENSG00000162614.18 TPM= 5.84 Transcript Type= NA
chr1	77888515	77943891	77888515	77943891	+	ENST00000330010.12@NEXN	ENST00000330010.12	protein_coding	77888515,77916055,77917960,77918125,77925188,77926414,77926716,77929316,77933282,77935823,77942023,77942461	77888759,77916133,77918038,77918273,77925229,77926611,77926892,77929504,77933479,77936044,77942208,77943891	Gene ID= ENSG00000162614.18 TPM= 16.35 Transcript Type= protein_coding
chr1	77888513	77933384	77888513	77933384	+	ENST00000401035.7@NEXN	ENST00000401035.7	protein_coding	77888513,77916055,77917960,77918125,77925188,77926414,77926716,77929316,77933282	77888759,77916133,77918038,77918273,77925229,77926611,77926892,77929504,77933384	Gene ID= ENSG00000162614.18 TPM= 2.34 Transcript Type= protein_coding
chr1	77888628	77943224	77888628	77943224	+	ENST00000334785.11@NEXN	ENST00000334785.11	protein_coding	77888628,77916055,77917566,77917960,77918125,77925188,77926414,77926716,77929316,77933282,77935823,77942023,77942461	77888759,77916133,77917757,77918038,77918273,77925229,77926611,77926892,77929504,77933479,77936044,77942208,77943224	Gene ID= ENSG00000162614.18 TPM= 2.34 Transcript Type= protein_coding
chr1	77940854	77948641	77940854	77948641	+	transcript6508.chr1.nnic@NA	transcript6508.chr1.nnic	NA	77940854	77948641	Gene ID= novel_gene_chr1_6509 TPM= 10.51 Transcript Type= NA
chr1	77948405	77979457	77948405	77979457	-	transcript6460.chr1.nic@FUBP1	transcript6460.chr1.nic	protein_coding	77978885,77969925,77969022,77968165,77967627,77967049,77966884,77966694,77965069,77964870,77964646,77964254,77964062,77963574,77962770,77960344,77960184,77956572,77955255,77949155,77948405	77979457,77970015,77969084,77968203,77967666,77967098,77966955,77966751,77965231,77964968,77964747,77964356,77964162,77963715,77962930,77960495,77960263,77956700,77955329,77949300,77948774	Gene ID= ENSG00000162613.16 TPM= 6.22 Transcript Type= NA
chr1	77948405	77979525	77948405	77979525	-	transcript6464.chr1.nic@FUBP1	transcript6464.chr1.nic	protein_coding	77978885,77969925,77968165,77967627,77967049,77966884,77966694,77965069,77964870,77964646,77964254,77964062,77963574,77962770,77960344,77960184,77956572,77955255,77949155,77948405	77979525,77970015,77968203,77967666,77967098,77966955,77966751,77965231,77964968,77964747,77964356,77964162,77963715,77962930,77960495,77960263,77956700,77955329,77949300,77948774	Gene ID= ENSG00000162613.16 TPM= 26.07 Transcript Type= NA
chr1	77948405	77979086	77948405	77979086	-	ENST00000370768.6@FUBP1	ENST00000370768.6	protein_coding	77978885,77969925,77968165,77967627,77967049,77966884,77966694,77965069,77964870,77964646,77964254,77964062,77963574,77962770,77960344,77960184,77956572,77955255,77949155,77948405	77979086,77970015,77968203,77967666,77967101,77966955,77966751,77965231,77964968,77964747,77964356,77964162,77963715,77962930,77960495,77960263,77956700,77955329,77949300,77948774	Gene ID= ENSG00000162613.16 TPM= 54.09 Transcript Type= protein_coding
chr1	77979275	78017964	77979275	78017964	+	transcript6502.chr1.nic@DNAJB4	transcript6502.chr1.nic	protein_coding	77979275,78013051,78016014	77979619,78013619,78017964	Gene ID= ENSG00000162616.8 TPM= 2.92 Transcript Type= NA
chr1	78004854	78017964	78004854	78017964	+	ENST00000370763.5@DNAJB4	ENST00000370763.5	protein_coding	78004854,78013051,78016014	78005321,78013619,78017964	Gene ID= ENSG00000162616.8 TPM= 14.59 Transcript Type= protein_coding
chr1	78045902	78138449	78045902	78138449	+	ENST00000370759.3@GIPC2	ENST00000370759.3	protein_coding	78045902,78080675,78094952,78119393,78125881,78135592	78046334,78080860,78095132,78119499,78125962,78138449	Gene ID= ENSG00000137960.5 TPM= 9.34 Transcript Type= protein_coding
chr1	78229560	78539749	78229560	78539749	+	transcript6527.chr1.nnic@PTGFR	transcript6527.chr1.nnic	protein_coding	78229560,78398951,78492672,78536406	78229729,78399025,78493541,78539749	Gene ID= ENSG00000122420.9 TPM= 7.01 Transcript Type= NA
chr1	78229665	78254884	78229665	78254884	+	transcript6530.chr1.nic@MGC27382	transcript6530.chr1.nic	processed_transcript	78229665,78250184,78251494	78229729,78250373,78254884	Gene ID= ENSG00000237413.5 TPM= 2.34 Transcript Type= NA
chr1	78257463	78262293	78257463	78262293	+	transcript6539.chr1.nnic@NA	transcript6539.chr1.nnic	NA	78257463	78262293	Gene ID= novel_gene_chr1_6540 TPM= 2.34 Transcript Type= NA
chr1	78620428	78642799	78620428	78642799	+	transcript6545.chr1.nic@IFI44L	transcript6545.chr1.nic	protein_coding	78620428,78628951,78629720,78635337,78637032,78641021,78641435,78641775	78620571,78628999,78629915,78635489,78637203,78641121,78641609,78642799	Gene ID= ENSG00000137959.15 TPM= 7.01 Transcript Type= NA
chr1	78649831	78664078	78649831	78664078	+	ENST00000370747.8@IFI44	ENST00000370747.8	protein_coding	78649831,78650186,78654243,78655014,78655362,78659312,78660554,78662704,78663765	78649905,78650652,78654279,78655209,78655511,78659483,78660654,78662878,78664078	Gene ID= ENSG00000137965.10 TPM= 3.5 Transcript Type= protein_coding
chr1	78889764	79006718	78889764	79006718	-	ENST00000370742.3@ADGRL4	ENST00000370742.3	protein_coding	79006633,79005070,78946274,78939188,78938100,78937807,78936295,78926886,78921613,78920183,78917830,78917634,78893098,78891524,78889764	79006718,79005219,78946426,78939258,78938279,78937990,78936411,78927091,78921786,78920386,78918050,78917700,78893189,78891692,78891216	Gene ID= ENSG00000162618.13 TPM= 26.85 Transcript Type= protein_coding
chr1	81801401	81992423	81801401	81992423	+	transcript6572.chr1.nnic@ADGRL2	transcript6572.chr1.nnic	protein_coding	81801401,81836885,81907017,81936728,81942969,81950189,81951018,81951957,81955877,81966058,81966404,81968026,81969178,81970314,81971852,81979869,81981808,81984583,81985259,81987260,81990391	81802229,81837057,81907230,81936837,81943769,81950482,81951121,81952142,81956060,81966183,81966609,81968199,81969387,81970534,81971918,81979960,81981976,81984711,81985355,81987341,81992423	Gene ID= ENSG00000117114.19 TPM= 11.19 Transcript Type= NA
chr1	81800989	81991812	81800989	81991812	+	transcript6575.chr1.nnic@ADGRL2	transcript6575.chr1.nnic	protein_coding	81800989,81836885,81907017,81936728,81942969,81950189,81951018,81951957,81955877,81966058,81966404,81968026,81969178,81970314,81971852,81979869,81981808,81984583,81985259,81990391	81801068,81837057,81907230,81936837,81943769,81950482,81951121,81952142,81956060,81966183,81966609,81968199,81969387,81970534,81971918,81979960,81981976,81984711,81985355,81991812	Gene ID= ENSG00000117114.19 TPM= 3.5 Transcript Type= NA
chr1	81801382	81992422	81801382	81992422	+	transcript6578.chr1.nnic@ADGRL2	transcript6578.chr1.nnic	protein_coding	81801382,81836885,81907017,81936728,81942969,81950189,81951018,81951957,81955877,81966058,81966404,81968026,81969178,81970314,81971852,81979869,81981808,81984583,81985259,81990391	81802229,81837057,81907230,81936837,81943769,81950482,81951121,81952142,81956060,81966183,81966609,81968199,81969387,81970534,81971918,81979960,81981976,81984711,81985355,81992422	Gene ID= ENSG00000117114.19 TPM= 28.7 Transcript Type= NA
chr1	81994857	81995257	81994857	81995257	-	transcript6581.chr1.nnic@NA	transcript6581.chr1.nnic	NA	81994857	81995257	Gene ID= novel_gene_chr1_6582 TPM= 2.34 Transcript Type= NA
chr1	83865028	83999132	83865028	83999132	-	ENST00000260505.12@TTLL7	ENST00000260505.12	protein_coding	83998931,83952187,83951845,83949865,83948628,83947124,83942463,83937852,83933608,83929136,83921247,83921087,83919699,83917604,83911165,83907456,83906329,83904079,83890321,83882963,83865028	83999132,83952387,83951976,83949986,83948695,83947282,83942679,83938016,83933766,83929230,83921394,83921160,83919834,83917690,83911363,83907661,83906463,83904159,83890481,83883136,83870082	Gene ID= ENSG00000137941.16 TPM= 2.34 Transcript Type= protein_coding
chr1	84144271	84238498	84144271	84238498	+	ENST00000370685.7@PRKACB	ENST00000370685.7	protein_coding	84144271,84179177,84182200,84184037,84185100,84196616,84197729,84202683,84214153,84235180	84144548,84179238,84182328,84184135,84185182,84196742,84197824,84202805,84214317,84238498	Gene ID= ENSG00000142875.19 TPM= 11.68 Transcript Type= protein_coding
chr1	84078062	84238498	84078062	84238498	+	ENST00000370689.6@PRKACB	ENST00000370689.6	protein_coding	84078062,84179177,84182200,84184037,84185100,84196616,84197729,84202683,84214153,84235180	84078371,84179238,84182328,84184135,84185182,84196742,84197824,84202805,84214317,84238498	Gene ID= ENSG00000142875.19 TPM= 10.51 Transcript Type= protein_coding
chr1	84408269	84415018	84408269	84415018	+	transcript6595.chr1.nnic@DNASE2B	transcript6595.chr1.nnic	protein_coding	84408269,84410838,84412349,84414528	84408518,84411010,84412546,84415018	Gene ID= ENSG00000137976.7 TPM= 4.09 Transcript Type= NA
chr1	84408230	84415008	84408230	84415008	+	ENST00000370662.3@DNASE2B	ENST00000370662.3	protein_coding	84408230,84410838,84412349,84414528	84408518,84410999,84412546,84415008	Gene ID= ENSG00000137976.7 TPM= 14.59 Transcript Type= protein_coding
chr1	84498325	84506183	84498325	84506183	-	transcript6625.chr1.nnic@GNG5	transcript6625.chr1.nnic	protein_coding	84506011,84498325	84506183,84498548	Gene ID= ENSG00000174021.10 TPM= 2.34 Transcript Type= NA
chr1	84498325	84506565	84498325	84506565	-	ENST00000370645.8@GNG5	ENST00000370645.8	protein_coding	84506436,84506011,84501826,84498325	84506565,84506301,84501970,84498548	Gene ID= ENSG00000174021.10 TPM= 176.89 Transcript Type= protein_coding
chr1	84498325	84574475	84498325	84574475	-	transcript6599.chr1.nnic@CTBS	transcript6599.chr1.nnic	protein_coding	84574239,84570582,84569931,84565841,84563735,84563257,84501826,84498325	84574475,84570720,84570139,84566012,84563832,84563418,84501970,84498548	Gene ID= ENSG00000117151.12 TPM= 9.92 Transcript Type= NA
chr1	84553121	84574480	84553121	84574480	-	ENST00000477677.5@CTBS	ENST00000477677.5	protein_coding	84574239,84570582,84565841,84563735,84563257,84553121	84574480,84570720,84566012,84563832,84563418,84555199	Gene ID= ENSG00000117151.12 TPM= 7.39 Transcript Type= processed_transcript
chr1	84549606	84574464	84549606	84574464	-	ENST00000370630.5@CTBS	ENST00000370630.5	protein_coding	84574239,84570582,84569931,84565841,84563735,84563257,84549606	84574464,84570720,84570139,84566012,84563832,84563418,84555199	Gene ID= ENSG00000117151.12 TPM= 3.89 Transcript Type= protein_coding
chr1	84646029	84690504	84646029	84690504	-	transcript6632.chr1.nnic@SSX2IP	transcript6632.chr1.nnic	protein_coding	84690154,84680338,84670646,84669681,84666122,84664417,84662455,84662198,84658318,84656348,84655832,84651883,84650362,84646029	84690504,84680387,84670815,84669893,84666232,84664552,84662530,84662375,84658468,84656484,84656005,84651997,84650527,84647607	Gene ID= ENSG00000117155.16 TPM= 2.34 Transcript Type= NA
chr1	84643707	84690468	84643707	84690468	-	ENST00000437941.6@SSX2IP	ENST00000437941.6	protein_coding	84690154,84670646,84669681,84666122,84664417,84662455,84662198,84658318,84656348,84655832,84651883,84650362,84643707	84690468,84670815,84669893,84666232,84664552,84662530,84662375,84658468,84656484,84656005,84651997,84650527,84647607	Gene ID= ENSG00000117155.16 TPM= 1.17 Transcript Type= protein_coding
chr1	84925583	84997103	84925583	84997103	-	transcript6641.chr1.nnic@MCOLN2	transcript6641.chr1.nnic	protein_coding	84996796,84971695,84965549,84958529,84956431,84952446,84952243,84947033,84940879,84939553,84937981,84937755,84931362,84929558,84925583	84997103,84972034,84965708,84958702,84956584,84952530,84952339,84947132,84940991,84939702,84938082,84937877,84931568,84929679,84926721	Gene ID= ENSG00000153898.12 TPM= 2.34 Transcript Type= NA
chr1	84925583	84997159	84925583	84997159	-	transcript6642.chr1.nic@MCOLN2	transcript6642.chr1.nic	protein_coding	84996796,84971936,84965549,84958529,84956431,84952446,84952243,84947033,84940879,84939553,84937981,84937755,84931362,84929558,84925583	84997159,84972034,84965708,84958702,84956584,84952530,84952339,84947132,84940991,84939702,84938082,84937877,84931568,84929679,84926721	Gene ID= ENSG00000153898.12 TPM= 7.01 Transcript Type= NA
chr1	84925583	84996940	84925583	84996940	-	ENST00000370608.7@MCOLN2	ENST00000370608.7	protein_coding	84996796,84965549,84958529,84956431,84952446,84952243,84947033,84940879,84939553,84937981,84937755,84931362,84929558,84925583	84996940,84965708,84958702,84956584,84952530,84952339,84947132,84940991,84939702,84938082,84937877,84931568,84929679,84926721	Gene ID= ENSG00000153898.12 TPM= 1.17 Transcript Type= protein_coding
chr1	85152487	85154443	85152487	85154443	-	transcript6655.chr1.nnic@NA	transcript6655.chr1.nnic	NA	85152487	85154443	Gene ID= novel_gene_chr1_6656 TPM= 3.5 Transcript Type= NA
chr1	85249953	85259672	85249953	85259672	-	ENST00000294661.8@C1orf52	ENST00000294661.8	protein_coding	85259358,85258935,85258524,85249953	85259672,85259061,85258722,85252702	Gene ID= ENSG00000162642.13 TPM= 1.17 Transcript Type= processed_transcript
chr1	85251968	85259642	85251968	85259642	-	ENST00000471115.5@C1orf52	ENST00000471115.5	protein_coding	85259358,85258524,85251968	85259642,85258722,85252702	Gene ID= ENSG00000162642.13 TPM= 7.01 Transcript Type= protein_coding
chr1	85266248	85277090	85266248	85277090	-	ENST00000370580.5@BCL10	ENST00000370580.5	protein_coding	85276296,85270618,85266248	85277090,85270906,85267982	Gene ID= ENSG00000142867.12 TPM= 53.71 Transcript Type= protein_coding
chr1	85266248	85276631	85266248	85276631	-	transcript6682.chr1.nnic@BCL10	transcript6682.chr1.nnic	protein_coding	85275163,85270618,85266248	85276631,85270906,85267982	Gene ID= ENSG00000142867.12 TPM= 2.34 Transcript Type= NA
chr1	85318486	85578363	85318486	85578363	-	ENST00000426972.7@DDAH1	ENST00000426972.7	protein_coding	85577984,85496166,85358748,85351506,85350415,85324740,85318486	85578363,85496281,85358847,85351579,85350534,85324883,85321568	Gene ID= ENSG00000153904.18 TPM= 29.77 Transcript Type= protein_coding
chr1	85345335	85465443	85345335	85465443	-	transcript6689.chr1.nic@DDAH1	transcript6689.chr1.nic	protein_coding	85464743,85358748,85351506,85345335	85465443,85358847,85351579,85350534	Gene ID= ENSG00000153904.18 TPM= 2.34 Transcript Type= NA
chr1	85318485	85465140	85318485	85465140	-	ENST00000284031.12@DDAH1	ENST00000284031.12	protein_coding	85464743,85358748,85351506,85350415,85324740,85318485	85465140,85358847,85351579,85350534,85324883,85321568	Gene ID= ENSG00000153904.18 TPM= 48.46 Transcript Type= protein_coding
chr1	85580761	85583962	85580761	85583962	+	ENST00000451137.6@CYR61	ENST00000451137.6	protein_coding	85580761,85581365,85581928,85582416,85582740	85581047,85581578,85582284,85582624,85583962	Gene ID= ENSG00000142871.16 TPM= 205.5 Transcript Type= protein_coding
chr1	85652808	85708418	85652808	85708418	-	ENST00000370574.3@ZNHIT6	ENST00000370574.3	protein_coding	85707629,85706442,85706249,85706078,85702157,85680836,85678701,85677236,85657847,85652808	85708418,85706507,85706355,85706163,85702260,85680904,85678781,85677313,85657971,85654098	Gene ID= ENSG00000117174.10 TPM= 9.34 Transcript Type= protein_coding
chr1	86348111	86396342	86348111	86396342	-	transcript6704.chr1.nic@ODF2L	transcript6704.chr1.nic	protein_coding	86396033,86386915,86385458,86384676,86383134,86382931,86382242,86376233,86372431,86371018,86360426,86358787,86356444,86354774,86354530,86352859,86348111	86396342,86387086,86385590,86384801,86383196,86383002,86382358,86376418,86372540,86371153,86360536,86358891,86356602,86354859,86354692,86352984,86348878	Gene ID= ENSG00000122417.15 TPM= 2.34 Transcript Type= NA
chr1	86348738	86396340	86348738	86396340	-	ENST00000370566.7@ODF2L	ENST00000370566.7	protein_coding	86396033,86386915,86385458,86384676,86383134,86382931,86382242,86376233,86372431,86371018,86360426,86358787,86354774,86354530,86352859,86348738	86396340,86387086,86385590,86384801,86383196,86383002,86382358,86376418,86372540,86371153,86360536,86358891,86354859,86354692,86352984,86348878	Gene ID= ENSG00000122417.15 TPM= 1.17 Transcript Type= protein_coding
chr1	86348736	86350276	86348736	86350276	-	transcript6723.chr1.nnic@NA	transcript6723.chr1.nnic	NA	86348736	86350276	Gene ID= novel_gene_chr1_6724 TPM= 2.34 Transcript Type= NA
chr1	86703501	86705243	86703501	86705243	-	transcript6745.chr1.nnic@NA	transcript6745.chr1.nnic	NA	86703501	86705243	Gene ID= novel_gene_chr1_6746 TPM= 4.67 Transcript Type= NA
chr1	86704570	86748176	86704570	86748176	+	ENST00000535010.5@SH3GLB1	ENST00000535010.5	protein_coding	86704570,86719507,86722540,86724313,86734602,86735079,86742208,86743128	86704971,86719635,86722673,86724405,86734691,86735179,86742436,86748176	Gene ID= ENSG00000097033.14 TPM= 8.17 Transcript Type= protein_coding
chr1	86704537	86724893	86704537	86724893	+	transcript6741.chr1.nic@SH3GLB1	transcript6741.chr1.nic	protein_coding	86704537,86715724,86719507,86722540,86724313	86704971,86715865,86719635,86722673,86724893	Gene ID= ENSG00000097033.14 TPM= 4.67 Transcript Type= NA
chr1	86704576	86748184	86704576	86748184	+	ENST00000370558.8@SH3GLB1	ENST00000370558.8	protein_coding	86704576,86715724,86719507,86722540,86724313,86734602,86735079,86742208,86743128	86704971,86715865,86719635,86722673,86724405,86734691,86735179,86742436,86748184	Gene ID= ENSG00000097033.14 TPM= 26.85 Transcript Type= protein_coding
chr1	86862445	86914365	86862445	86914365	-	ENST00000331835.9@SELENOF	ENST00000331835.9	protein_coding	86914028,86903281,86880662,86868053,86862445	86914365,86903448,86880725,86868102,86863605	Gene ID= ENSG00000183291.15 TPM= 39.7 Transcript Type= protein_coding
chr1	86862725	86914134	86862725	86914134	-	ENST00000370554.5@SELENOF	ENST00000370554.5	protein_coding	86914028,86903281,86880662,86862725	86914134,86903448,86880725,86863605	Gene ID= ENSG00000183291.15 TPM= 9.34 Transcript Type= protein_coding
chr1	86914674	87109998	86914674	87109998	+	ENST00000370550.9@HS2ST1	ENST00000370550.9	protein_coding	86914674,87072934,87084194,87092531,87097838,87103432,87104470	86915160,87073172,87084279,87092669,87097935,87103589,87109998	Gene ID= ENSG00000153936.16 TPM= 11.68 Transcript Type= protein_coding
chr1	86914648	87098445	86914648	87098445	+	ENST00000370551.8@HS2ST1	ENST00000370551.8	protein_coding	86914648,87072934,87084194,87092531,87097838	86915160,87073172,87084279,87092669,87098445	Gene ID= ENSG00000153936.16 TPM= 2.34 Transcript Type= protein_coding
chr1	87328468	87348923	87328468	87348923	+	ENST00000370544.9@LMO4	ENST00000370544.9	protein_coding	87328468,87332013,87339536,87340047,87344788	87329244,87332251,87339632,87340202,87348923	Gene ID= ENSG00000143013.12 TPM= 4.67 Transcript Type= protein_coding
chr1	87331668	87345408	87331668	87345408	+	ENST00000370542.1@LMO4	ENST00000370542.1	protein_coding	87331668,87332013,87339536,87340047,87344788	87331814,87332251,87339632,87340202,87345408	Gene ID= ENSG00000143013.12 TPM= 4.67 Transcript Type= protein_coding
chr1	88684222	88836255	88684222	88836255	+	ENST00000370521.7@PKN2	ENST00000370521.7	protein_coding	88684222,88740988,88760222,88770352,88771421,88771663,88784639,88786104,88804391,88804846,88805497,88805891,88807313,88807529,88807684,88813557,88821941,88824310,88828481,88832744,88833077,88833245	88684628,88741288,88760376,88770469,88771566,88771879,88784824,88786213,88804534,88804921,88805671,88806017,88807443,88807604,88807775,88813733,88822003,88824386,88828623,88832851,88833157,88836255	Gene ID= ENSG00000065243.19 TPM= 7.01 Transcript Type= protein_coding
chr1	88684228	88761634	88684228	88761634	+	transcript6788.chr1.nic@PKN2	transcript6788.chr1.nic	protein_coding	88684228,88740988,88760222	88684628,88741288,88761634	Gene ID= ENSG00000065243.19 TPM= 3.5 Transcript Type= NA
chr1	88852932	88891618	88852932	88891618	-	ENST00000370500.9@GTF2B	ENST00000370500.9	protein_coding	88891483,88887261,88863981,88860140,88859882,88857206,88852932	88891618,88887367,88864114,88860286,88860011,88857487,88853346	Gene ID= ENSG00000137947.11 TPM= 36.2 Transcript Type= protein_coding
chr1	88921044	88992754	88921044	88992754	-	transcript6797.chr1.nnic@KYAT3	transcript6797.chr1.nnic	protein_coding	88992585,88988252,88969409,88968670,88964829,88962059,88961381,88961167,88955149,88953063,88949091,88943350,88943005,88936099,88921044	88992754,88988351,88969467,88968814,88964978,88962145,88961506,88961287,88955225,88953152,88949277,88943423,88943091,88936245,88921238	Gene ID= ENSG00000137944.17 TPM= 2.34 Transcript Type= NA
chr1	88935816	88992921	88935816	88992921	-	ENST00000260508.8@KYAT3	ENST00000260508.8	protein_coding	88992585,88988252,88969409,88968670,88964829,88962059,88961381,88961167,88955149,88953063,88949091,88943350,88943005,88935816	88992921,88988351,88969467,88968814,88964978,88962145,88961506,88961287,88955225,88953152,88949277,88943423,88943091,88936245	Gene ID= ENSG00000137944.17 TPM= 2.34 Transcript Type= protein_coding
chr1	88935773	88992776	88935773	88992776	-	ENST00000370491.7@KYAT3	ENST00000370491.7	protein_coding	88992585,88969409,88968670,88964829,88962059,88961381,88961167,88955149,88953063,88949091,88943350,88943005,88935773	88992776,88969467,88968814,88964978,88962145,88961506,88961287,88955225,88953152,88949277,88943423,88943091,88936245	Gene ID= ENSG00000137944.17 TPM= 4.67 Transcript Type= protein_coding
chr1	88979459	88992960	88979459	88992960	-	ENST00000399794.6@RBMXL1	ENST00000399794.6	protein_coding	88992585,88988252,88979459	88992960,88988351,88984066	Gene ID= ENSG00000213516.9 TPM= 12.84 Transcript Type= protein_coding
chr1	88979456	88992772	88979456	88992772	-	ENST00000321792.5@RBMXL1	ENST00000321792.5	protein_coding	88992585,88979456	88992772,88984066	Gene ID= ENSG00000213516.9 TPM= 11.68 Transcript Type= protein_coding
chr1	89006666	89022882	89006666	89022882	-	ENST00000370481.8@GBP3	ENST00000370481.8	protein_coding	89022684,89020532,89015287,89014547,89014083,89013185,89011747,89010904,89009392,89008947,89006666	89022882,89020743,89015414,89014656,89014279,89013427,89012027,89011116,89009494,89009140,89007852	Gene ID= ENSG00000117226.11 TPM= 23.35 Transcript Type= protein_coding
chr1	89006680	89022807	89006680	89022807	-	transcript6816.chr1.nnic@GBP3	transcript6816.chr1.nnic	protein_coding	89022684,89020532,89015287,89014547,89014083,89013185,89011828,89010904,89009392,89008947,89006680	89022807,89020743,89015414,89014656,89014279,89013427,89012027,89011116,89009494,89009140,89007852	Gene ID= ENSG00000117226.11 TPM= 5.84 Transcript Type= NA
chr1	89052319	89065360	89052319	89065360	-	ENST00000370473.4@GBP1	ENST00000370473.4	protein_coding	89065160,89063045,89060197,89059317,89058841,89057992,89056854,89056016,89055113,89054682,89052319	89065360,89063253,89060324,89059426,89059043,89058234,89057134,89056228,89055215,89054875,89053468	Gene ID= ENSG00000117228.9 TPM= 30.36 Transcript Type= protein_coding
chr1	89108066	89126153	89108066	89126153	-	transcript6824.chr1.nnic@GBP2	transcript6824.chr1.nnic	protein_coding	89125863,89121777,89121143,89120179,89117577,89116992,89114016,89112460,89110164,89109677,89108066	89126153,89121983,89121270,89120288,89117773,89117234,89114296,89112684,89110266,89109870,89108291	Gene ID= ENSG00000162645.12 TPM= 2.92 Transcript Type= NA
chr1	89108000	89126114	89108000	89126114	-	ENST00000370466.3@GBP2	ENST00000370466.3	protein_coding	89125863,89121777,89121143,89120179,89117577,89116992,89114016,89112472,89110164,89109677,89108000	89126114,89121983,89121270,89120288,89117773,89117234,89114296,89112684,89110266,89109870,89108291	Gene ID= ENSG00000162645.12 TPM= 6.42 Transcript Type= protein_coding
chr1	89181144	89198950	89181144	89198950	-	transcript6827.chr1.nnic@GBP4	transcript6827.chr1.nnic	protein_coding	89198795,89197110,89195297,89193303,89192904,89191261,89190038,89188582,89187000,89186333,89182646,89181144	89198950,89197304,89195424,89193412,89193100,89191506,89190318,89188794,89187102,89186526,89185469,89182499	Gene ID= ENSG00000162654.8 TPM= 2.34 Transcript Type= NA
chr1	89181144	89198950	89181144	89198950	-	transcript6828.chr1.nnic@GBP4	transcript6828.chr1.nnic	protein_coding	89198795,89197110,89195297,89193303,89192904,89191261,89190038,89188582,89187000,89186333,89185237,89181144	89198950,89197304,89195424,89193412,89193100,89191506,89190318,89188794,89187102,89186526,89185469,89183872	Gene ID= ENSG00000162654.8 TPM= 2.34 Transcript Type= NA
chr1	89181148	89198932	89181148	89198932	-	ENST00000355754.6@GBP4	ENST00000355754.6	protein_coding	89198795,89197110,89195297,89193303,89192904,89191261,89190038,89188582,89187000,89186333,89181148	89198932,89197304,89195424,89193412,89193100,89191506,89190318,89188794,89187102,89186526,89185469	Gene ID= ENSG00000162654.8 TPM= 17.51 Transcript Type= protein_coding
chr1	89524825	89593393	89524825	89593393	+	transcript6841.chr1.nnic@LRRC8B	transcript6841.chr1.nnic	protein_coding	89524825,89549915,89568247,89568439,89579591,89582625,89592771	89525022,89549971,89568307,89568493,89579688,89584789,89593393	Gene ID= ENSG00000197147.13 TPM= 8.17 Transcript Type= NA
chr1	89524896	89585819	89524896	89585819	+	transcript6846.chr1.nnic@LRRC8B	transcript6846.chr1.nnic	protein_coding	89524896,89549915,89568247,89568439,89579591,89582625	89525022,89549971,89568307,89568493,89579688,89585819	Gene ID= ENSG00000197147.13 TPM= 3.5 Transcript Type= NA
chr1	89524903	89597864	89524903	89597864	+	ENST00000330947.6@LRRC8B	ENST00000330947.6	protein_coding	89524903,89568247,89568439,89579591,89582625,89592771	89525022,89568307,89568493,89579688,89584789,89597864	Gene ID= ENSG00000197147.13 TPM= 1.17 Transcript Type= protein_coding
chr1	89820170	89821768	89820170	89821768	-	transcript6862.chr1.nnic@NA	transcript6862.chr1.nnic	NA	89820170	89821768	Gene ID= novel_gene_chr1_6863 TPM= 2.34 Transcript Type= NA
chr1	89821032	89936611	89821032	89936611	+	ENST00000337338.9@LRRC8D	ENST00000337338.9	protein_coding	89821032,89843638,89933067	89821291,89843782,89936611	Gene ID= ENSG00000171492.14 TPM= 5.84 Transcript Type= protein_coding
chr1	89995109	90028538	89995109	90028538	+	transcript6873.chr1.nic@ZNF326	transcript6873.chr1.nic	protein_coding	89995109,89998110,90005003,90005133,90010088,90013126,90017317,90018685,90020792,90022250,90027354	89995273,89998154,90005038,90007750,90010286,90013237,90017464,90018784,90020922,90022345,90028538	Gene ID= ENSG00000162664.16 TPM= 3.5 Transcript Type= NA
chr1	89995115	90028538	89995115	90028538	+	ENST00000340281.8@ZNF326	ENST00000340281.8	protein_coding	89995115,89998110,90005003,90005133,90007345,90010088,90013126,90017317,90018685,90020792,90022250,90027354	89995273,89998154,90005038,90005244,90007750,90010286,90013237,90017464,90018784,90020922,90022345,90028538	Gene ID= ENSG00000162664.16 TPM= 2.34 Transcript Type= protein_coding
chr1	90024982	90031272	90024982	90031272	-	transcript6878.chr1.nnic@NA	transcript6878.chr1.nnic	NA	90024982	90031272	Gene ID= novel_gene_chr1_6879 TPM= 2.34 Transcript Type= NA
chr1	90029552	90033586	90029552	90033586	+	transcript6876.chr1.nnic@NA	transcript6876.chr1.nnic	NA	90029552	90033586	Gene ID= novel_gene_chr1_6877 TPM= 4.67 Transcript Type= NA
chr1	90782983	90851657	90782983	90851657	-	ENST00000635581.1@AL590094.1	ENST00000635581.1	processed_transcript	90851483,90789398,90782983	90851657,90789487,90783423	Gene ID= ENSG00000233593.8 TPM= 2.34 Transcript Type= lincRNA
chr1	91020448	91022055	91020448	91022055	-	ENST00000495966.1@ZNF644	ENST00000495966.1	protein_coding	91021990,91020448	91022055,91021201	Gene ID= ENSG00000122482.20 TPM= 1.17 Transcript Type= processed_transcript
chr1	91500893	91525764	91500893	91525764	+	ENST00000234626.10@CDC7	ENST00000234626.10	protein_coding	91500893,91501654,91507854,91508262,91511597,91511781,91513058,91513948,91514819,91515794,91520130,91524041	91500948,91501831,91507937,91508397,91511690,91511923,91513307,91514043,91514997,91515876,91520279,91525764	Gene ID= ENSG00000097046.12 TPM= 2.34 Transcript Type= protein_coding
chr1	91680345	91886279	91680345	91886279	-	ENST00000212355.8@TGFBR3	ENST00000212355.8	protein_coding	91885878,91861471,91797287,91758613,91734776,91729805,91727659,91721955,91719893,91719312,91716568,91716236,91712243,91708663,91698089,91695672,91680345	91886279,91861644,91797471,91758750,91734959,91729973,91727806,91722144,91720230,91719464,91716708,91716394,91712542,91708783,91698130,91695779,91683857	Gene ID= ENSG00000069702.10 TPM= 26.27 Transcript Type= protein_coding
chr1	91682426	91886151	91682426	91886151	-	transcript6906.chr1.nnic@TGFBR3	transcript6906.chr1.nnic	protein_coding	91886030,91861471,91797287,91758613,91734776,91729805,91727659,91721955,91719893,91719312,91716568,91716236,91712243,91708663,91698089,91695672,91682426	91886151,91861644,91797471,91758750,91734959,91729973,91727806,91722144,91720230,91719464,91716708,91716394,91712542,91708783,91698130,91695779,91683857	Gene ID= ENSG00000069702.10 TPM= 2.92 Transcript Type= NA
chr1	92298965	92402056	92298965	92402056	+	ENST00000610020.1@RPAP2	ENST00000610020.1	protein_coding	92298965,92300194,92301476,92303977,92304284,92307188,92320599,92323445,92333391,92336347,92345846,92380724,92387011	92299146,92300239,92301590,92304075,92304349,92307276,92320634,92324375,92333473,92336427,92345914,92380873,92402056	Gene ID= ENSG00000122484.8 TPM= 4.67 Transcript Type= protein_coding
chr1	92299029	92351328	92299029	92351328	+	transcript6917.chr1.nnic@RPAP2	transcript6917.chr1.nnic	protein_coding	92299029,92300194,92301476,92303977,92304284,92307188,92320599,92323445,92333391,92336347,92345846,92349652	92299146,92300239,92301590,92304075,92304349,92307276,92320634,92324375,92333473,92336427,92345914,92351328	Gene ID= ENSG00000122484.8 TPM= 2.34 Transcript Type= NA
chr1	92474762	92486071	92474762	92486071	-	ENST00000427103.5@GFI1	ENST00000427103.5	protein_coding	92486014,92483373,92482864,92480601,92480348,92478588,92474762	92486071,92483586,92483046,92481088,92480485,92478753,92476207	Gene ID= ENSG00000162676.11 TPM= 2.92 Transcript Type= protein_coding
chr1	92474764	92486876	92474764	92486876	-	ENST00000294702.5@GFI1	ENST00000294702.5	protein_coding	92486726,92483373,92482864,92480601,92480348,92478588,92474764	92486876,92483586,92483046,92481088,92480485,92478753,92476207	Gene ID= ENSG00000162676.11 TPM= 1.75 Transcript Type= protein_coding
chr1	92512466	92785108	92512466	92785108	-	transcript6927.chr1.nnic@EVI5	transcript6927.chr1.nnic	protein_coding	92784836,92736398,92704555,92703395,92702141,92697860,92695310,92694299,92693802,92677158,92665939,92663420,92636202,92625794,92624176,92607581,92605307,92563642,92512466	92785108,92736627,92704744,92703619,92702215,92697985,92695453,92694388,92693899,92677218,92665992,92663452,92636336,92625934,92624334,92607727,92605402,92563737,92513970	Gene ID= ENSG00000067208.14 TPM= 5.84 Transcript Type= NA
chr1	92706958	92710098	92706958	92710098	+	transcript6932.chr1.nnic@NA	transcript6932.chr1.nnic	NA	92706958	92710098	Gene ID= novel_gene_chr1_6933 TPM= 4.67 Transcript Type= NA
chr1	92832025	92841924	92832025	92841924	+	ENST00000370321.7@RPL5	ENST00000370321.7	protein_coding	92832025,92833389,92833545,92834779,92836190,92837456,92840551,92841766	92832117,92833458,92833660,92834913,92836392,92837633,92840639,92841924	Gene ID= ENSG00000122406.12 TPM= 336.27 Transcript Type= protein_coding
chr1	92842167	92961500	92842167	92961500	-	ENST00000370310.4@FAM69A	ENST00000370310.4	protein_coding	92961376,92876296,92850848,92847183,92842167	92961500,92876430,92850955,92847359,92844195	Gene ID= ENSG00000154511.11 TPM= 7.01 Transcript Type= protein_coding
chr1	93079235	93139079	93079235	93139079	+	ENST00000545708.5@MTF2	ENST00000545708.5	protein_coding	93079235,93110230,93110327,93110545,93114688,93114988,93115470,93118345,93119333,93120549,93127232,93129278,93133703,93133928,93134091,93136670	93079531,93110246,93110428,93110626,93114783,93115088,93115618,93118440,93119401,93120672,93127299,93129448,93133808,93133980,93134195,93139079	Gene ID= ENSG00000143033.17 TPM= 1.17 Transcript Type= protein_coding
chr1	93079238	93139081	93079238	93139081	+	ENST00000370298.8@MTF2	ENST00000370298.8	protein_coding	93079238,93110230,93110545,93114688,93114988,93115470,93118345,93119333,93120549,93127232,93129278,93133703,93133928,93134091,93136670	93079531,93110428,93110626,93114783,93115088,93115618,93118440,93119401,93120672,93127299,93129448,93133808,93133980,93134195,93139081	Gene ID= ENSG00000143033.17 TPM= 5.84 Transcript Type= protein_coding
chr1	93079311	93137151	93079311	93137151	+	ENST00000370303.4@MTF2	ENST00000370303.4	protein_coding	93079311,93110230,93110545,93114688,93114988,93115470,93118345,93119333,93120549,93127232,93133703,93133928,93134091,93136670	93079531,93110428,93110626,93114783,93115088,93115618,93118440,93119401,93120672,93127299,93133808,93133980,93134195,93137151	Gene ID= ENSG00000143033.17 TPM= 1.17 Transcript Type= protein_coding
chr1	93151850	93180412	93151850	93180412	-	transcript6969.chr1.nnic@TMED5	transcript6969.chr1.nnic	protein_coding	93180054,93160129,93156417,93151850	93180412,93160226,93156483,93154888	Gene ID= ENSG00000117500.12 TPM= 10.51 Transcript Type= NA
chr1	93168862	93174479	93168862	93174479	+	transcript6981.chr1.nnic@NA	transcript6981.chr1.nnic	NA	93168862	93174479	Gene ID= novel_gene_chr1_6982 TPM= 2.34 Transcript Type= NA
chr1	93332241	93345851	93332241	93345851	-	transcript7001.chr1.nnic@CCDC18-AS1	transcript7001.chr1.nnic	processed_transcript	93345724,93340458,93339649,93339357,93337377,93332241	93345851,93340510,93339679,93339536,93339274,93333463	Gene ID= ENSG00000223745.7 TPM= 5.84 Transcript Type= NA
chr1	93448693	93554659	93448693	93554659	+	transcript7016.chr1.nnic@FNBP1L	transcript7016.chr1.nnic	protein_coding	93448693,93499468,93522082,93523344,93524261,93529652,93530755,93532922,93534705,93544107,93546842,93547347,93549278,93550947,93552409	93448831,93499583,93522135,93523491,93524323,93529756,93530883,93533068,93534908,93544216,93546974,93547441,93549426,93551105,93554659	Gene ID= ENSG00000137942.16 TPM= 4.67 Transcript Type= NA
chr1	93448131	93554659	93448131	93554659	+	ENST00000260506.12@FNBP1L	ENST00000260506.12	protein_coding	93448131,93499468,93522082,93523344,93524261,93529652,93530755,93532922,93534705,93544107,93546842,93547347,93549278,93550947	93448305,93499583,93522135,93523491,93524323,93529756,93530883,93533068,93534908,93544216,93546974,93547441,93549426,93554659	Gene ID= ENSG00000137942.16 TPM= 29.19 Transcript Type= protein_coding
chr1	93561791	93681797	93561791	93681797	-	transcript7024.chr1.nnic@BCAR3	transcript7024.chr1.nnic	protein_coding	93681598,93674614,93667096,93642304,93592265,93588977,93584018,93582301,93576014,93571670,93567740,93567279,93561791	93681797,93674941,93667229,93642343,93592393,93589419,93584121,93582953,93576129,93571841,93567851,93567491,93562419	Gene ID= ENSG00000137936.16 TPM= 8.96 Transcript Type= NA
chr1	93561791	93681829	93561791	93681829	-	ENST00000260502.10@BCAR3	ENST00000260502.10	protein_coding	93681598,93674614,93642304,93592265,93588977,93584018,93582301,93576014,93571670,93567740,93567279,93561791	93681829,93674941,93642343,93592393,93589419,93584121,93582953,93576129,93571841,93567851,93567491,93562419	Gene ID= ENSG00000137936.16 TPM= 60.33 Transcript Type= protein_coding
chr1	93561787	93585082	93561787	93585082	-	ENST00000539242.5@BCAR3	ENST00000539242.5	protein_coding	93584972,93584018,93582301,93576014,93571670,93567740,93567279,93561787	93585082,93584121,93582953,93576129,93571841,93567851,93567491,93562419	Gene ID= ENSG00000137936.16 TPM= 6.62 Transcript Type= protein_coding
chr1	93573635	93575619	93573635	93575619	-	transcript7036.chr1.nnic@NA	transcript7036.chr1.nnic	NA	93573635	93575619	Gene ID= novel_gene_chr1_7037 TPM= 2.34 Transcript Type= NA
chr1	93847277	93849660	93847277	93849660	+	transcript7039.chr1.nnic@NA	transcript7039.chr1.nnic	NA	93847277	93849660	Gene ID= novel_gene_chr1_7040 TPM= 2.34 Transcript Type= NA
chr1	93866283	93879206	93866283	93879206	-	ENST00000436063.6@DNTTIP2	ENST00000436063.6	protein_coding	93879077,93876268,93875645,93873119,93872072,93870683,93866283	93879206,93877862,93875783,93873214,93872236,93870792,93869944	Gene ID= ENSG00000067334.13 TPM= 85.23 Transcript Type= protein_coding
chr1	93885205	93909410	93885205	93909410	-	ENST00000370238.7@GCLM	ENST00000370238.7	protein_coding	93909038,93904523,93901585,93897839,93896618,93894614,93885205	93909410,93904588,93901669,93897898,93896820,93894728,93889159	Gene ID= ENSG00000023909.9 TPM= 3.5 Transcript Type= protein_coding
chr1	94172598	94247776	94172598	94247776	-	transcript7061.chr1.nnic@ARHGAP29	transcript7061.chr1.nnic	protein_coding	94247565,94231407,94220258,94209254,94208832,94205635,94205061,94203930,94203100,94202918,94202544,94201720,94189926,94189216,94188837,94186499,94185342,94184872,94184151,94179725,94177852,94177612,94172598	94247776,94231643,94220392,94209350,94208904,94205683,94205198,94203994,94203210,94202998,94202732,94201857,94190083,94189352,94188941,94186597,94185481,94185060,94184288,94179957,94178167,94177720,94174749	Gene ID= ENSG00000137962.12 TPM= 40.08 Transcript Type= NA
chr1	94172598	94237631	94172598	94237631	-	transcript7065.chr1.nnic@ARHGAP29	transcript7065.chr1.nnic	protein_coding	94237415,94220258,94209254,94208832,94205635,94205061,94203930,94203100,94202918,94202544,94201720,94189926,94189216,94188837,94186499,94185342,94184872,94184151,94179725,94177852,94177612,94172598	94237631,94220392,94209350,94208904,94205683,94205198,94203994,94203210,94202998,94202732,94201857,94190083,94189352,94188941,94186597,94185481,94185060,94184288,94179957,94178167,94177720,94174749	Gene ID= ENSG00000137962.12 TPM= 12.06 Transcript Type= NA
chr1	94172598	94247759	94172598	94247759	-	transcript7066.chr1.nnic@ARHGAP29	transcript7066.chr1.nnic	protein_coding	94247565,94220258,94209254,94208832,94205635,94205061,94203930,94203100,94202918,94202544,94201720,94189926,94189216,94188837,94186499,94185342,94184872,94184151,94179725,94177852,94177612,94172598	94247759,94220392,94209350,94208904,94205683,94205198,94203994,94203210,94202998,94202732,94201857,94190083,94189352,94188941,94186597,94185481,94185060,94184288,94179957,94178167,94177720,94174749	Gene ID= ENSG00000137962.12 TPM= 9.73 Transcript Type= NA
chr1	94171751	94237565	94171751	94237565	-	ENST00000260526.10@ARHGAP29	ENST00000260526.10	protein_coding	94237415,94231407,94220258,94209254,94208832,94205635,94205061,94203930,94203100,94202918,94202544,94201720,94189926,94189216,94188837,94186499,94185342,94184872,94184151,94179725,94177852,94177612,94171751	94237565,94231643,94220392,94209350,94208904,94205683,94205198,94203994,94203210,94202998,94202732,94201857,94190083,94189352,94188941,94186597,94185481,94185060,94184288,94179957,94178167,94177720,94174749	Gene ID= ENSG00000137962.12 TPM= 3.5 Transcript Type= protein_coding
chr1	94418455	94518663	94418455	94518663	+	ENST00000370214.8@ABCD3	ENST00000370214.8	protein_coding	94418455,94458607,94464775,94467919,94473766,94475143,94475614,94478259,94480464,94483170,94487542,94487694,94487892,94489725,94489903,94491184,94498602,94498783,94498945,94499495,94506538,94515146,94517052	94418588,94458643,94464873,94468007,94473835,94475240,94475737,94478315,94480606,94483239,94487611,94487791,94487983,94489816,94489975,94491247,94498679,94498848,94499034,94499614,94506642,94515202,94518663	Gene ID= ENSG00000117528.11 TPM= 14.01 Transcript Type= protein_coding
chr1	94529316	94541745	94529316	94541745	-	transcript7090.chr1.nic@F3	transcript7090.chr1.nic	protein_coding	94540572,94540257,94535965,94533090,94532321,94529316	94541745,94540368,94536164,94533268,94532480,94530596	Gene ID= ENSG00000117525.13 TPM= 8.56 Transcript Type= NA
chr1	94529225	94541800	94529225	94541800	-	ENST00000334047.11@F3	ENST00000334047.11	protein_coding	94541537,94540257,94535965,94533090,94532321,94529225	94541800,94540368,94536164,94533268,94532480,94530596	Gene ID= ENSG00000117525.13 TPM= 7.39 Transcript Type= protein_coding
chr1	94820350	94895246	94820350	94895246	+	ENST00000271227.10@SLC44A3	ENST00000271227.10	protein_coding	94820350,94820949,94824493,94827507,94828493,94837711,94839948,94842000,94845278,94857335,94864743,94867331,94891130,94892281,94894818	94820478,94821056,94824635,94827643,94828586,94837871,94840037,94842124,94845464,94857500,94864899,94867417,94891267,94892517,94895246	Gene ID= ENSG00000143036.16 TPM= 2.34 Transcript Type= protein_coding
chr1	94820397	94895052	94820397	94895052	+	ENST00000527077.5@SLC44A3	ENST00000527077.5	protein_coding	94820397,94824493,94827507,94828493,94837711,94839948,94842000,94845278,94857335,94864743,94867331,94891130,94892281,94894818	94820478,94824635,94827547,94828586,94837871,94840037,94842124,94845464,94857500,94864899,94867417,94891267,94892517,94895052	Gene ID= ENSG00000143036.16 TPM= 3.5 Transcript Type= protein_coding
chr1	94820401	94895053	94820401	94895053	+	ENST00000529450.5@SLC44A3	ENST00000529450.5	protein_coding	94820401,94820949,94824493,94827507,94828493,94837711,94839948,94842000,94845278,94857335,94864743,94867334,94891130,94892281,94894818	94820478,94821056,94824635,94827547,94828586,94837871,94840037,94842124,94845464,94857500,94864899,94867417,94891267,94892517,94895053	Gene ID= ENSG00000143036.16 TPM= 5.84 Transcript Type= protein_coding
chr1	94820650	94895029	94820650	94895029	+	ENST00000532427.5@SLC44A3	ENST00000532427.5	protein_coding	94820650,94824493,94827507,94828493,94837711,94839948,94842000,94845278,94857335,94864743,94867331,94891130,94892281,94894818	94820723,94824635,94827547,94828586,94837871,94840037,94842124,94845464,94857500,94864899,94867417,94891267,94892517,94895029	Gene ID= ENSG00000143036.16 TPM= 1.17 Transcript Type= protein_coding
chr1	94820621	94895053	94820621	94895053	+	ENST00000467909.5@SLC44A3	ENST00000467909.5	protein_coding	94820621,94824493,94827507,94828493,94837711,94839948,94842000,94845278,94857335,94864743,94867331,94891130,94892281,94894818	94820723,94824635,94827643,94828586,94837871,94840037,94842124,94845464,94857500,94864899,94867417,94891267,94892517,94895053	Gene ID= ENSG00000143036.16 TPM= 3.5 Transcript Type= protein_coding
chr1	94896951	94927278	94896951	94927278	-	ENST00000370206.8@CNN3	ENST00000370206.8	protein_coding	94926838,94903403,94903122,94902121,94901669,94899371,94896951	94927278,94903524,94903188,94902258,94901785,94899517,94898083	Gene ID= ENSG00000117519.15 TPM= 763.51 Transcript Type= protein_coding
chr1	94982804	95072952	94982804	95072952	-	transcript7141.chr1.nnic@ALG14	transcript7141.chr1.nnic	protein_coding	95072763,95064866,95041493,95027129,94982804	95072952,95065017,95041612,95027260,94983306	Gene ID= ENSG00000172339.9 TPM= 2.34 Transcript Type= NA
chr1	95117338	95197607	95117338	95197607	+	ENST00000370203.8@TMEM56	ENST00000370203.8	protein_coding	95117338,95143891,95148702,95150208,95151325,95173816,95191550	95117617,95144056,95148791,95150266,95151419,95173889,95197607	Gene ID= ENSG00000152078.9 TPM= 5.25 Transcript Type= protein_coding
chr1	95117408	95194943	95117408	95194943	+	transcript7156.chr1.nic@TMEM56	transcript7156.chr1.nic	protein_coding	95117408,95143891,95148702,95150208,95151325,95173816,95191550	95118091,95144056,95148791,95150266,95151419,95173889,95194943	Gene ID= ENSG00000152078.9 TPM= 2.92 Transcript Type= NA
chr1	95234155	95247225	95234155	95247225	+	ENST00000370202.4@RWDD3	ENST00000370202.4	protein_coding	95234155,95244211,95246542,95246756	95234315,95244698,95246657,95247225	Gene ID= ENSG00000122481.16 TPM= 4.67 Transcript Type= protein_coding
chr1	95234210	95247223	95234210	95247223	+	transcript7164.chr1.nnic@RWDD3	transcript7164.chr1.nnic	protein_coding	95234210,95246542,95246756	95234315,95246657,95247223	Gene ID= ENSG00000122481.16 TPM= 2.34 Transcript Type= NA
chr1	95234211	95247223	95234211	95247223	+	ENST00000263893.10@RWDD3	ENST00000263893.10	protein_coding	95234211,95244211,95246756	95234315,95244715,95247223	Gene ID= ENSG00000122481.16 TPM= 1.17 Transcript Type= protein_coding
chr1	95234221	95247217	95234221	95247217	+	ENST00000495272.5@RWDD3	ENST00000495272.5	protein_coding	95234221,95239777,95244211,95246542,95246756	95234315,95239909,95244698,95246657,95247217	Gene ID= ENSG00000122481.16 TPM= 1.17 Transcript Type= processed_transcript
chr1	97077743	97921034	97077743	97921034	-	transcript7178.chr1.nnic@DPYD	transcript7178.chr1.nnic	protein_coding	97920884,97883264,97828114,97740392,97721510,97699351,97691717,97679095,97595059,97593218,97573760,97549560,97450059,97382393,97373561,97306177,97305259,97234852,97193069,97098489,97082330,97077743	97921034,97883374,97828196,97740479,97721671,97699547,97691798,97679182,97595166,97593387,97573970,97549744,97450223,97382461,97373644,97306297,97305378,97234994,97193248,97098632,97082470,97079146	Gene ID= ENSG00000188641.12 TPM= 3.5 Transcript Type= NA
chr1	97077743	97921058	97077743	97921058	-	transcript7180.chr1.nnic@DPYD	transcript7180.chr1.nnic	protein_coding	97920884,97883264,97828114,97740392,97721510,97699351,97691717,97679095,97595059,97593218,97573760,97549560,97515726,97450059,97382393,97373561,97306177,97234852,97193069,97098489,97082330,97077743	97921058,97883374,97828196,97740479,97721671,97699547,97691798,97679182,97595166,97593387,97573970,97549744,97515941,97450223,97382461,97373644,97306297,97234994,97193248,97098632,97082470,97079146	Gene ID= ENSG00000188641.12 TPM= 4.67 Transcript Type= NA
chr1	97731190	97921025	97731190	97921025	-	transcript7195.chr1.nnic@DPYD	transcript7195.chr1.nnic	protein_coding	97920884,97883264,97828114,97740392,97731190	97921025,97883374,97828196,97740479,97732470	Gene ID= ENSG00000188641.12 TPM= 6.22 Transcript Type= NA
chr1	97826834	97921025	97826834	97921025	-	transcript7199.chr1.nic@DPYD	transcript7199.chr1.nic	protein_coding	97920884,97883264,97826834	97921025,97883374,97828196	Gene ID= ENSG00000188641.12 TPM= 3.89 Transcript Type= NA
chr1	97077743	97921023	97077743	97921023	-	ENST00000370192.7@DPYD	ENST00000370192.7	protein_coding	97920884,97883264,97828114,97740392,97721510,97699351,97691717,97679095,97595059,97593218,97573760,97549560,97515726,97450059,97382393,97373561,97306177,97305259,97234852,97193069,97098489,97082330,97077743	97921023,97883374,97828196,97740479,97721671,97699547,97691798,97679182,97595166,97593387,97573970,97549744,97515941,97450223,97382461,97373644,97306297,97305378,97234994,97193248,97098632,97082470,97079146	Gene ID= ENSG00000188641.12 TPM= 130.19 Transcript Type= protein_coding
chr1	97719758	97921049	97719758	97921049	-	ENST00000306031.5@DPYD	ENST00000306031.5	protein_coding	97920884,97883264,97828114,97740392,97721510,97719758	97921049,97883374,97828196,97740479,97721671,97720926	Gene ID= ENSG00000188641.12 TPM= 2.14 Transcript Type= protein_coding
chr1	97285685	97292494	97285685	97292494	-	transcript7201.chr1.nnic@NA	transcript7201.chr1.nnic	NA	97285685	97292494	Gene ID= novel_gene_chr1_7202 TPM= 2.34 Transcript Type= NA
chr1	98661682	98760500	98661682	98760500	+	transcript7205.chr1.nic@SNX7	transcript7205.chr1.nic	protein_coding	98661682,98684885,98691075,98691535,98695518,98698706,98701817,98760054	98661911,98685067,98691185,98691699,98695716,98698905,98701903,98760500	Gene ID= ENSG00000162627.16 TPM= 5.84 Transcript Type= NA
chr1	98661723	98760500	98661723	98760500	+	ENST00000306121.7@SNX7	ENST00000306121.7	protein_coding	98661723,98684885,98691075,98691535,98695518,98698706,98701817,98738237,98760054	98661911,98685067,98691185,98691699,98695716,98698905,98701903,98738389,98760500	Gene ID= ENSG00000162627.16 TPM= 51.37 Transcript Type= protein_coding
chr1	99263953	99309590	99263953	99309590	+	ENST00000370185.7@PLPPR4	ENST00000370185.7	protein_coding	99263953,99287965,99296738,99299035,99300909,99301724,99305685	99264671,99288150,99296867,99299230,99300966,99301897,99309590	Gene ID= ENSG00000117600.12 TPM= 4.67 Transcript Type= protein_coding
chr1	99645943	99694541	99645943	99694541	+	ENST00000263174.8@PALMD	ENST00000263174.8	protein_coding	99645943,99662319,99667642,99686676,99686930,99687076,99688775,99694019	99646362,99662399,99667766,99686790,99686963,99687189,99689872,99694541	Gene ID= ENSG00000099260.10 TPM= 7.01 Transcript Type= protein_coding
chr1	99683266	99694541	99683266	99694541	+	ENST00000496843.1@PALMD	ENST00000496843.1	protein_coding	99683266,99686930,99687076,99688775,99694019	99686790,99686963,99687189,99689872,99694541	Gene ID= ENSG00000099260.10 TPM= 1.17 Transcript Type= retained_intron
chr1	99850084	99924020	99850084	99924020	+	ENST00000361915.7@AGL	ENST00000361915.7	protein_coding	99850084,99850975,99861503,99862257,99864386,99870400,99870758,99874687,99875154,99875358,99876458,99877641,99879923,99880632,99881076,99881292,99881541,99884120,99884339,99884569,99887978,99891220,99891606,99892432,99896286,99900636,99902683,99910712,99912405,99913527,99915389,99916410,99916598,99921534	99850415,99851124,99861713,99862423,99864589,99870581,99870869,99874810,99875256,99875455,99876597,99877828,99880046,99880795,99881177,99881447,99881691,99884244,99884451,99884703,99888108,99891356,99891739,99892607,99896388,99900861,99902794,99910847,99912517,99913738,99915486,99916497,99916731,99924020	Gene ID= ENSG00000162688.16 TPM= 15.18 Transcript Type= protein_coding
chr1	99970006	100026887	99970006	100026887	+	transcript7219.chr1.nnic@SLC35A3	transcript7219.chr1.nnic	protein_coding	99970006,99974971,99993537,99999261,100007034,100011365,100015302,100017682,100022386,100024768	99970162,99975069,99993741,99999415,100007156,100011533,100015420,100017815,100023707,100026887	Gene ID= ENSG00000117620.14 TPM= 2.34 Transcript Type= NA
chr1	99969561	100035637	99969561	100035637	+	ENST00000533028.7@SLC35A3	ENST00000533028.7	protein_coding	99969561,99993537,99999261,100007034,100011365,100015302,100017682,100022386	99970162,99993741,99999415,100007156,100011533,100015420,100017815,100035637	Gene ID= ENSG00000117620.14 TPM= 2.34 Transcript Type= protein_coding
chr1	99969974	100026851	99969974	100026851	+	transcript7234.chr1.nic@SLC35A3	transcript7234.chr1.nic	protein_coding	99969974,99993537,99999261,100007034,100011365,100015302,100017682,100024645	99970162,99993741,99999415,100007156,100011533,100015420,100017815,100026851	Gene ID= ENSG00000117620.14 TPM= 3.5 Transcript Type= NA
chr1	100038096	100083377	100038096	100083377	+	transcript7246.chr1.nnic@AC118553.2	transcript7246.chr1.nnic	protein_coding	100038096,100043073,100049909,100058666,100059878,100061835,100067977,100068473,100069614,100077165,100078451,100080496,100082003	100038316,100043229,100050004,100058728,100060005,100061949,100068195,100068586,100069685,100077277,100078548,100080659,100083377	Gene ID= ENSG00000283761.1 TPM= 10.51 Transcript Type= NA
chr1	100036633	100038856	100036633	100038856	-	transcript7264.chr1.nnic@NA	transcript7264.chr1.nnic	NA	100036633	100038856	Gene ID= novel_gene_chr1_7265 TPM= 3.5 Transcript Type= NA
chr1	100038097	100041934	100038097	100041934	+	transcript7262.chr1.nnic@NA	transcript7262.chr1.nnic	NA	100038097	100041934	Gene ID= novel_gene_chr1_7263 TPM= 5.84 Transcript Type= NA
chr1	100038097	100083377	100038097	100083377	+	ENST00000370152.7@MFSD14A	ENST00000370152.7	protein_coding	100038097,100049909,100058666,100059878,100061835,100067977,100068473,100069614,100077165,100078451,100080496,100082003	100038316,100050004,100058728,100060005,100061949,100068195,100068586,100069685,100077277,100078548,100080659,100083377	Gene ID= ENSG00000156875.13 TPM= 141.28 Transcript Type= protein_coding
chr1	100083563	100132955	100083563	100132955	-	ENST00000287482.5@SASS6	ENST00000287482.5	protein_coding	100132750,100125882,100123210,100122380,100121378,100120394,100119018,100110292,100107810,100107628,100107374,100106912,100105767,100102955,100088139,100085536,100083563	100132955,100125942,100123289,100122484,100121549,100120459,100119137,100110483,100108004,100107717,100107553,100106993,100105903,100103083,100088236,100085630,100085434	Gene ID= ENSG00000156876.9 TPM= 4.67 Transcript Type= protein_coding
chr1	100083563	100132955	100083563	100132955	-	ENST00000462159.1@SASS6	ENST00000462159.1	protein_coding	100132750,100125882,100123210,100122380,100121378,100120394,100119018,100110292,100107628,100107374,100106912,100105767,100102955,100088139,100085536,100083563	100132955,100125942,100123289,100122484,100121549,100120459,100119137,100110483,100108004,100107553,100106993,100105903,100103083,100088236,100085630,100085434	Gene ID= ENSG00000156876.9 TPM= 1.17 Transcript Type= processed_transcript
chr1	100133163	100150497	100133163	100150497	+	ENST00000370141.6@TRMT13	ENST00000370141.6	protein_coding	100133163,100136882,100137019,100139649,100140182,100140408,100140852,100143137,100144069,100147894,100148625	100133315,100136928,100137085,100139711,100140251,100140514,100141019,100143209,100144143,100148326,100150497	Gene ID= ENSG00000122435.9 TPM= 3.5 Transcript Type= protein_coding
chr1	100186919	100249834	100186919	100249834	-	ENST00000370132.8@DBT	ENST00000370132.8	protein_coding	100249770,100240761,100235436,100230733,100218626,100215983,100214817,100210694,100206445,100206230,100186919	100249834,100240884,100235511,100230914,100218747,100216199,100214983,100210771,100206636,100206301,100196422	Gene ID= ENSG00000137992.14 TPM= 7.01 Transcript Type= protein_coding
chr1	100246609	100247715	100246609	100247715	+	transcript7278.chr1.nnic@NA	transcript7278.chr1.nnic	NA	100246609	100247715	Gene ID= novel_gene_chr1_7279 TPM= 2.34 Transcript Type= NA
chr1	100266193	100291771	100266193	100291771	+	transcript7289.chr1.nic@RTCA	transcript7289.chr1.nic	protein_coding	100266193,100266524,100268074,100270557,100273394,100274824,100275599,100277258,100285228,100287099,100291403	100266420,100266624,100268295,100270680,100273452,100274965,100275723,100277316,100285322,100287203,100291771	Gene ID= ENSG00000137996.12 TPM= 2.34 Transcript Type= NA
chr1	100266248	100292769	100266248	100292769	+	transcript7290.chr1.nnic@RTCA	transcript7290.chr1.nnic	protein_coding	100266248,100266524,100268137,100270557,100273394,100274824,100275599,100277258,100285228,100287099,100291403	100266420,100266624,100268295,100270680,100273452,100274965,100275723,100277316,100285322,100287203,100292769	Gene ID= ENSG00000137996.12 TPM= 2.34 Transcript Type= NA
chr1	100266193	100292769	100266193	100292769	+	transcript7296.chr1.nnic@RTCA	transcript7296.chr1.nnic	protein_coding	100266193,100266524,100268152,100270557,100273394,100275599,100277258,100285228,100287099,100291403	100266420,100266624,100268295,100270680,100273452,100275723,100277316,100285322,100287203,100292769	Gene ID= ENSG00000137996.12 TPM= 2.34 Transcript Type= NA
chr1	100266207	100292769	100266207	100292769	+	ENST00000370128.8@RTCA	ENST00000370128.8	protein_coding	100266207,100266524,100268152,100270557,100273394,100274824,100275599,100277258,100285228,100287099,100291403	100266420,100266624,100268295,100270680,100273452,100274965,100275723,100277316,100285322,100287203,100292769	Gene ID= ENSG00000137996.12 TPM= 15.18 Transcript Type= protein_coding
chr1	100266249	100291771	100266249	100291771	+	ENST00000260563.4@RTCA	ENST00000260563.4	protein_coding	100266249,100266524,100267500,100268152,100270557,100273394,100274824,100275599,100277258,100285228,100287099,100291403	100266420,100266624,100267538,100268295,100270680,100273452,100274965,100275723,100277316,100285322,100287203,100291771	Gene ID= ENSG00000137996.12 TPM= 7.01 Transcript Type= protein_coding
chr1	100288617	100291771	100288617	100291771	+	transcript7297.chr1.nnic@NA	transcript7297.chr1.nnic	NA	100288617	100291771	Gene ID= novel_gene_chr1_7298 TPM= 4.67 Transcript Type= NA
chr1	100487507	100490561	100487507	100490561	-	transcript7303.chr1.nnic@NA	transcript7303.chr1.nnic	NA	100487507	100490561	Gene ID= novel_gene_chr1_7304 TPM= 2.34 Transcript Type= NA
chr1	100719760	100739045	100719760	100739045	+	ENST00000294728.6@VCAM1	ENST00000294728.6	protein_coding	100719760,100720476,100723020,100724624,100729107,100731198,100732418,100734502,100738123	100719924,100720751,100723340,100724890,100729382,100731518,100732684,100734768,100739045	Gene ID= ENSG00000162692.10 TPM= 23.35 Transcript Type= protein_coding
chr1	100872387	100895998	100872387	100895998	-	ENST00000370114.7@EXTL2	ENST00000370114.7	protein_coding	100894633,100888753,100877476,100876794,100872387	100895998,100888828,100877903,100876864,100874430	Gene ID= ENSG00000162694.13 TPM= 7.59 Transcript Type= protein_coding
chr1	100872387	100894812	100872387	100894812	-	ENST00000370113.7@EXTL2	ENST00000370113.7	protein_coding	100894633,100888753,100877476,100876794,100872387	100894812,100888864,100877903,100876864,100874430	Gene ID= ENSG00000162694.13 TPM= 1.75 Transcript Type= protein_coding
chr1	100896076	100981753	100896076	100981753	+	ENST00000370112.8@SLC30A7	ENST00000370112.8	protein_coding	100896076,100896570,100906852,100911063,100912112,100913663,100918077,100921706,100961828,100965769,100974810,100975219	100896342,100896671,100906965,100911150,100912238,100913806,100918127,100921841,100961918,100965918,100974902,100981753	Gene ID= ENSG00000162695.11 TPM= 88.74 Transcript Type= protein_coding
chr1	101025858	101087265	101025858	101087265	+	transcript7332.chr1.nnic@AC093157.1	transcript7332.chr1.nnic	antisense_RNA	101025858,101086852	101026061,101087265	Gene ID= ENSG00000233184.6 TPM= 3.5 Transcript Type= NA
chr1	101234556	101236616	101234556	101236616	-	transcript7344.chr1.nnic@NA	transcript7344.chr1.nnic	NA	101234556	101236616	Gene ID= novel_gene_chr1_7345 TPM= 4.67 Transcript Type= NA
chr1	101236730	101242310	101236730	101242310	+	transcript7334.chr1.nnic@S1PR1	transcript7334.chr1.nnic	protein_coding	101236730,101238822,101242028	101237099,101241772,101242310	Gene ID= ENSG00000170989.8 TPM= 24.52 Transcript Type= NA
chr1	101236888	101241518	101236888	101241518	+	ENST00000305352.6@S1PR1	ENST00000305352.6	protein_coding	101236888,101238822	101237099,101241518	Gene ID= ENSG00000170989.8 TPM= 401.65 Transcript Type= protein_coding
chr1	103514234	103514934	103514234	103514934	-	transcript7348.chr1.nnic@NA	transcript7348.chr1.nnic	NA	103514234	103514934	Gene ID= novel_gene_chr1_7349 TPM= 2.34 Transcript Type= NA
chr1	103525677	103579530	103525677	103579530	+	transcript7350.chr1.nic@RNPC3	transcript7350.chr1.nic	protein_coding	103525677,103526067,103527695,103533739,103534774,103535330,103536126,103537342,103541350,103543296,103544941,103546248,103546977,103550941,103551721,103553274,103565435,103571557,103572110,103573063,103573708,103574260,103575223,103575441,103577490,103577720,103579311	103525930,103526262,103527742,103533857,103534857,103535441,103536194,103537484,103541475,103543447,103545102,103546342,103547035,103551073,103551792,103555109,103565594,103571770,103572256,103573260,103573938,103574393,103575345,103575540,103577608,103577845,103579530	Gene ID= ENSG00000185946.15 TPM= 8.17 Transcript Type= NA
chr1	103525699	103579530	103525699	103579530	+	transcript7357.chr1.nic@RNPC3	transcript7357.chr1.nic	protein_coding	103525699,103527695,103533739,103534774,103535330,103536126,103537342,103541350,103543299,103544941,103546248,103546977,103550941,103551721,103553274,103565435,103571557,103572110,103573063,103573708,103574260,103575223,103575441,103577490,103577720,103579311	103526262,103527742,103533857,103534857,103535441,103536194,103537484,103541475,103543447,103545102,103546342,103547035,103551073,103551792,103555109,103565594,103571770,103572256,103573260,103573938,103574393,103575345,103575540,103577608,103577845,103579530	Gene ID= ENSG00000185946.15 TPM= 9.73 Transcript Type= NA
chr1	103525699	103579530	103525699	103579530	+	transcript7359.chr1.nic@RNPC3	transcript7359.chr1.nic	protein_coding	103525699,103527695,103533739,103534774,103535330,103536126,103537342,103541350,103543296,103544941,103546248,103546977,103550941,103551721,103553274,103565435,103571557,103572110,103573063,103573708,103574260,103575223,103575441,103577720,103579311	103526262,103527742,103533857,103534857,103535441,103536194,103537484,103541475,103543447,103545102,103546342,103547035,103551073,103551792,103555109,103565594,103571770,103572256,103573260,103573938,103574393,103575345,103575540,103577845,103579530	Gene ID= ENSG00000185946.15 TPM= 3.89 Transcript Type= NA
chr1	103525699	103555235	103525699	103555235	+	transcript7363.chr1.nic@RNPC3	transcript7363.chr1.nic	protein_coding	103525699,103527695,103533739,103534774,103535330,103536126,103537342,103541350,103543296,103544941,103546248,103546977,103550941,103551721,103553274	103526262,103527742,103533857,103534857,103535441,103536194,103537484,103541475,103543447,103545102,103546342,103547035,103551073,103551792,103555235	Gene ID= ENSG00000185946.15 TPM= 6.22 Transcript Type= NA
chr1	103525971	103555239	103525971	103555239	+	ENST00000423855.6@RNPC3	ENST00000423855.6	protein_coding	103525971,103527695,103533739,103534774,103535330,103536126,103537342,103541350,103543296,103544941,103546248,103546977,103550941,103551721,103555034	103526262,103527742,103533857,103534857,103535441,103536194,103537484,103541475,103543447,103545102,103546342,103547035,103551073,103551792,103555239	Gene ID= ENSG00000185946.15 TPM= 2.34 Transcript Type= protein_coding
chr1	103750406	103758690	103750406	103758690	+	ENST00000370079.3@AMY1C	ENST00000370079.3	protein_coding	103750406,103750983,103751933,103752579,103753549,103754499,103754715,103756795,103757024,103758469	103750637,103751129,103752130,103752809,103753682,103754621,103754814,103756913,103757149,103758690	Gene ID= ENSG00000187733.6 TPM= 1.17 Transcript Type= protein_coding
chr1	107056679	107059294	107056679	107059294	+	ENST00000370078.1@PRMT6	ENST00000370078.1	protein_coding	107056679	107059294	Gene ID= ENSG00000198890.7 TPM= 45.54 Transcript Type= protein_coding
chr1	107140436	107481853	107140436	107481853	+	transcript7383.chr1.nic@NTNG1	transcript7383.chr1.nic	protein_coding	107140436,107148069,107324282,107395154,107407682,107480611	107141140,107148839,107324922,107395326,107407708,107481853	Gene ID= ENSG00000162631.18 TPM= 4.67 Transcript Type= NA
chr1	107140007	107481853	107140007	107481853	+	ENST00000370074.8@NTNG1	ENST00000370074.8	protein_coding	107140007,107148069,107324282,107395154,107407682,107480611	107140199,107148839,107324922,107395326,107407708,107481853	Gene ID= ENSG00000162631.18 TPM= 7.01 Transcript Type= protein_coding
chr1	107140088	107140781	107140088	107140781	+	transcript7387.chr1.nnic@NA	transcript7387.chr1.nnic	NA	107140088	107140781	Gene ID= novel_gene_chr1_7388 TPM= 2.34 Transcript Type= NA
chr1	107571160	107965144	107571160	107965144	-	ENST00000370056.8@VAV3	ENST00000370056.8	protein_coding	107964666,107874901,107779434,107777231,107772735,107770636,107768441,107766447,107765076,107760784,107757261,107755427,107751117,107749462,107748968,107704960,107704550,107688381,107683488,107642619,107617567,107609931,107603047,107602397,107596212,107574047,107571160	107965144,107875017,107779492,107777296,107772843,107770728,107768509,107766550,107765175,107760879,107757329,107755513,107751202,107749594,107749077,107705061,107704650,107688406,107683533,107642755,107617632,107609965,107603163,107602484,107596341,107574198,107573372	Gene ID= ENSG00000134215.15 TPM= 3.5 Transcript Type= protein_coding
chr1	108050379	108076020	108050379	108076020	+	ENST00000634635.1@AL390036.1	ENST00000634635.1	lincRNA	108050379,108052311,108071484,108072549,108074393	108050735,108052461,108071637,108072697,108076020	Gene ID= ENSG00000226822.2 TPM= 1.17 Transcript Type= lincRNA
chr1	108134823	108200361	108134823	108200361	-	transcript7399.chr1.nnic@SLC25A24	transcript7399.chr1.nnic	protein_coding	108199956,108195432,108185828,108181941,108161182,108157462,108154983,108148279,108143543,108139058,108134823	108200361,108195480,108185954,108182028,108161293,108157620,108155135,108148386,108143710,108139208,108136837	Gene ID= ENSG00000085491.15 TPM= 7.01 Transcript Type= NA
chr1	108134036	108200358	108134036	108200358	-	ENST00000565488.5@SLC25A24	ENST00000565488.5	protein_coding	108199956,108185828,108181941,108161182,108157462,108154983,108148279,108143543,108139058,108134036	108200358,108185954,108182028,108161293,108157620,108155135,108148386,108143710,108139208,108136837	Gene ID= ENSG00000085491.15 TPM= 5.84 Transcript Type= protein_coding
chr1	108156039	108158718	108156039	108158718	+	transcript7405.chr1.nnic@NA	transcript7405.chr1.nnic	NA	108156039	108158718	Gene ID= novel_gene_chr1_7406 TPM= 3.5 Transcript Type= NA
chr1	108560089	108639327	108560089	108639327	+	ENST00000370035.7@FAM102B	ENST00000370035.7	protein_coding	108560089,108600566,108606223,108612178,108616382,108624645,108628167,108628395,108628677,108629588,108635108	108560565,108600686,108606252,108612294,108616428,108624748,108628262,108628584,108628804,108629657,108639327	Gene ID= ENSG00000162636.15 TPM= 14.01 Transcript Type= protein_coding
chr1	108648295	108661526	108648295	108661526	-	ENST00000370032.9@HENMT1	ENST00000370032.9	protein_coding	108661184,108659864,108657451,108655586,108654716,108651030,108650211,108648295	108661526,108659962,108657579,108655698,108654850,108651209,108650388,108648991	Gene ID= ENSG00000162639.15 TPM= 5.84 Transcript Type= protein_coding
chr1	108648290	108661122	108648290	108661122	-	ENST00000402983.5@HENMT1	ENST00000402983.5	protein_coding	108660963,108659864,108657451,108655586,108654716,108651030,108650211,108648290	108661122,108659962,108657579,108655698,108654850,108651209,108650388,108648991	Gene ID= ENSG00000162639.15 TPM= 1.17 Transcript Type= protein_coding
chr1	108648295	108661075	108648295	108661075	-	transcript7418.chr1.nic@HENMT1	transcript7418.chr1.nic	protein_coding	108660963,108659864,108657451,108655586,108654716,108651030,108648295	108661075,108659962,108657579,108655698,108654850,108651209,108650388	Gene ID= ENSG00000162639.15 TPM= 2.34 Transcript Type= NA
chr1	108692299	108701183	108692299	108701183	+	transcript7428.chr1.nnic@PRPF38B	transcript7428.chr1.nnic	protein_coding	108692299,108693590,108695702,108696043,108696277,108698604,108699162	108692867,108693642,108695780,108696194,108696351,108698827,108701183	Gene ID= ENSG00000134186.11 TPM= 2.34 Transcript Type= NA
chr1	108692299	108701183	108692299	108701183	+	transcript7443.chr1.nic@PRPF38B	transcript7443.chr1.nic	protein_coding	108692299,108693590,108695702,108696043,108696277,108699162	108692867,108693642,108695770,108696194,108698827,108701183	Gene ID= ENSG00000134186.11 TPM= 2.34 Transcript Type= NA
chr1	108692298	108697504	108692298	108697504	+	transcript7449.chr1.nic@PRPF38B	transcript7449.chr1.nic	protein_coding	108692298,108695702,108696043,108696277	108692867,108695770,108696194,108697504	Gene ID= ENSG00000134186.11 TPM= 2.34 Transcript Type= NA
chr1	108692323	108701803	108692323	108701803	+	ENST00000370025.8@PRPF38B	ENST00000370025.8	protein_coding	108692323,108695702,108696043,108696277,108698604,108699162	108692867,108695770,108696194,108696337,108698827,108701803	Gene ID= ENSG00000134186.11 TPM= 12.84 Transcript Type= protein_coding
chr1	108746688	108809526	108746688	108809526	+	ENST00000370008.3@STXBP3	ENST00000370008.3	protein_coding	108746688,108752257,108753063,108756690,108758510,108759985,108772665,108776333,108779286,108782422,108782649,108793582,108794827,108796234,108796620,108798145,108800220,108807401,108808783	108746786,108752306,108753144,108756766,108758588,108760085,108772819,108776423,108779410,108782517,108782706,108793647,108794907,108796372,108796726,108798237,108800305,108807549,108809526	Gene ID= ENSG00000116266.10 TPM= 113.26 Transcript Type= protein_coding
chr1	108876972	108930421	108876972	108930421	+	transcript7459.chr1.nnic@GPSM2	transcript7459.chr1.nnic	protein_coding	108876972,108885275,108886079,108896864,108897492,108897959,108898642,108898879,108901790,108903126,108904125,108914338,108918613,108922417,108924000,108929701	108877228,108885578,108886172,108897085,108897627,108898101,108898765,108898994,108901945,108903234,108904254,108914408,108918789,108922576,108924214,108930421	Gene ID= ENSG00000121957.12 TPM= 3.5 Transcript Type= NA
chr1	108876985	108930421	108876985	108930421	+	transcript7460.chr1.nnic@GPSM2	transcript7460.chr1.nnic	protein_coding	108876985,108882476,108885275,108896864,108897492,108897959,108898642,108898879,108901790,108903126,108904125,108914338,108918613,108922417,108924000,108929701	108877228,108882625,108885578,108897085,108897627,108898101,108898765,108898994,108901945,108903234,108904254,108914408,108918789,108922576,108924214,108930421	Gene ID= ENSG00000121957.12 TPM= 2.34 Transcript Type= NA
chr1	108876988	108930421	108876988	108930421	+	transcript7462.chr1.nnic@GPSM2	transcript7462.chr1.nnic	protein_coding	108876988,108882580,108885507,108896864,108897492,108897959,108898642,108898879,108901790,108903126,108904125,108914338,108918613,108922417,108924000,108929701	108877228,108882625,108885578,108897085,108897627,108898101,108898765,108898994,108901945,108903234,108904254,108914408,108918789,108922576,108924214,108930421	Gene ID= ENSG00000121957.12 TPM= 2.34 Transcript Type= NA
chr1	108875350	108934545	108875350	108934545	+	ENST00000406462.6@GPSM2	ENST00000406462.6	protein_coding	108875350,108876737,108885275,108896864,108897492,108897959,108898642,108898879,108901790,108903126,108904125,108914338,108918613,108922417,108924000,108929701	108875382,108877228,108885578,108897085,108897627,108898101,108898765,108898994,108901945,108903234,108904254,108914408,108918789,108922576,108924214,108934545	Gene ID= ENSG00000121957.12 TPM= 20.82 Transcript Type= protein_coding
chr1	108876972	108924361	108876972	108924361	+	transcript7466.chr1.nic@GPSM2	transcript7466.chr1.nic	protein_coding	108876972,108885275,108896864,108897492,108897959,108898642,108898879,108901790,108903126,108904125,108914338,108918613,108922417,108924000	108877228,108885578,108897085,108897627,108898101,108898765,108898994,108901945,108903234,108904254,108914408,108918789,108922576,108924361	Gene ID= ENSG00000121957.12 TPM= 3.89 Transcript Type= NA
chr1	108876981	108930421	108876981	108930421	+	ENST00000264126.7@GPSM2	ENST00000264126.7	protein_coding	108876981,108885275,108896864,108897492,108897959,108898642,108898879,108901790,108903126,108904125,108914338,108918613,108922417,108924000,108929701	108877228,108885578,108897085,108897627,108898101,108898765,108898994,108901945,108903234,108904254,108914408,108918789,108922576,108924214,108930421	Gene ID= ENSG00000121957.12 TPM= 22.57 Transcript Type= protein_coding
chr1	108926680	108928294	108926680	108928294	-	transcript7484.chr1.nnic@NA	transcript7484.chr1.nnic	NA	108926680	108928294	Gene ID= novel_gene_chr1_7485 TPM= 2.34 Transcript Type= NA
chr1	108927362	108931108	108927362	108931108	-	transcript7486.chr1.nnic@NA	transcript7486.chr1.nnic	NA	108927362	108931108	Gene ID= novel_gene_chr1_7487 TPM= 7.01 Transcript Type= NA
chr1	108929940	108963475	108929940	108963475	-	transcript7468.chr1.nic@CLCC1	transcript7468.chr1.nic	protein_coding	108963361,108962309,108950309,108949820,108947611,108943836,108943475,108941405,108940045,108939636,108937077,108934625,108929940	108963475,108962469,108950448,108949921,108947718,108944057,108943615,108941498,108940142,108939782,108937418,108934942,108932501	Gene ID= ENSG00000121940.15 TPM= 3.89 Transcript Type= NA
chr1	108929940	108963474	108929940	108963474	-	transcript7474.chr1.nnic@CLCC1	transcript7474.chr1.nnic	protein_coding	108963361,108950309,108949820,108947611,108943836,108943475,108941405,108940045,108939636,108937077,108934625,108929940	108963474,108950438,108949921,108947718,108944057,108943615,108941498,108940142,108939782,108937418,108934942,108932501	Gene ID= ENSG00000121940.15 TPM= 3.89 Transcript Type= NA
chr1	108929940	108963497	108929940	108963497	-	transcript7480.chr1.nic@CLCC1	transcript7480.chr1.nic	protein_coding	108963361,108950309,108949820,108947611,108943836,108943475,108941405,108940045,108939636,108937077,108929940	108963497,108950448,108949921,108947718,108944057,108943615,108941498,108940142,108939782,108937418,108934942	Gene ID= ENSG00000121940.15 TPM= 5.06 Transcript Type= NA
chr1	108929508	108963457	108929508	108963457	-	ENST00000356970.6@CLCC1	ENST00000356970.6	protein_coding	108963361,108950309,108949820,108947611,108943836,108943475,108941405,108940045,108939636,108937077,108934625,108929508	108963457,108950448,108949921,108947718,108944057,108943615,108941498,108940142,108939782,108937418,108934942,108932501	Gene ID= ENSG00000121940.15 TPM= 5.25 Transcript Type= protein_coding
chr1	108959452	108962884	108959452	108962884	+	transcript7482.chr1.nnic@NA	transcript7482.chr1.nnic	NA	108959452	108962884	Gene ID= novel_gene_chr1_7483 TPM= 5.84 Transcript Type= NA
chr1	108970214	109042075	108970214	109042075	-	ENST00000369962.7@WDR47	ENST00000369962.7	protein_coding	109041862,109023355,109017518,109013841,109010916,109004592,109002224,108995580,108991254,108986523,108983282,108982609,108981733,108974536,108970214	109042075,109023521,109017601,109013925,109011718,109004715,109002402,108995837,108991329,108986680,108983451,108982779,108981864,108974754,108971572	Gene ID= ENSG00000085433.15 TPM= 2.34 Transcript Type= protein_coding
chr1	108970214	109042113	108970214	109042113	-	ENST00000369965.8@WDR47	ENST00000369965.8	protein_coding	109041862,109023355,109017518,109013841,109010916,109004592,109002224,108995580,108991254,108986523,108983282,108982609,108981733,108974536,108970214	109042113,109023521,109017601,109013925,109011718,109004718,109002402,108995837,108991329,108986680,108983451,108982779,108981864,108974754,108971572	Gene ID= ENSG00000085433.15 TPM= 2.34 Transcript Type= protein_coding
chr1	108992282	108992836	108992282	108992836	+	ENST00000414070.1@BX679664.3	ENST00000414070.1	processed_pseudogene	108992282	108992836	Gene ID= ENSG00000244716.3 TPM= 1.17 Transcript Type= processed_pseudogene
chr1	109062486	109076003	109062486	109076003	-	transcript7491.chr1.nnic@TAF13	transcript7491.chr1.nnic	protein_coding	109075921,109074987,109066135,109064146,109062486	109076003,109075065,109066232,109064693,109063497	Gene ID= ENSG00000197780.9 TPM= 14.01 Transcript Type= NA
chr1	109089803	109096934	109089803	109096934	+	ENST00000338272.8@TMEM167B	ENST00000338272.8	protein_coding	109089803,109092890,109094417	109090882,109093021,109096934	Gene ID= ENSG00000215717.5 TPM= 87.57 Transcript Type= protein_coding
chr1	109101333	109103437	109101333	109103437	-	transcript7497.chr1.nnic@NA	transcript7497.chr1.nnic	NA	109101333	109103437	Gene ID= novel_gene_chr1_7498 TPM= 3.5 Transcript Type= NA
chr1	109114001	109203229	109114001	109203229	+	ENST00000369939.7@KIAA1324	ENST00000369939.7	protein_coding	109114001,109161894,109164499,109171866,109172488,109173474,109173688,109185045,109188177,109189066,109189592,109191366,109191726,109192611,109194421,109197474,109197979,109198573,109199854,109200059,109200735,109202944	109114336,109162014,109164691,109172013,109172568,109173579,109173837,109185133,109188354,109189194,109189682,109191471,109191863,109192874,109194594,109197654,109198075,109198674,109199980,109200237,109200900,109203229	Gene ID= ENSG00000116299.16 TPM= 4.67 Transcript Type= protein_coding
chr1	109213919	109238120	109213919	109238120	+	transcript7505.chr1.nnic@SARS	transcript7505.chr1.nnic	protein_coding	109213919,109221087,109223982,109228352,109229414,109230878,109231631,109235210,109235977,109236391,109237244,109237731	109214128,109221203,109224048,109228432,109229572,109231021,109231786,109235431,109236106,109236548,109237373,109238120	Gene ID= ENSG00000031698.12 TPM= 14.01 Transcript Type= NA
chr1	109213879	109238120	109213879	109238120	+	transcript7513.chr1.nic@SARS	transcript7513.chr1.nic	protein_coding	109213879,109223978,109228352,109229414,109230878,109231631,109235210,109235977,109237731	109214128,109224048,109228432,109229572,109231021,109231786,109235431,109237373,109238120	Gene ID= ENSG00000031698.12 TPM= 9.34 Transcript Type= NA
chr1	109213918	109238120	109213918	109238120	+	ENST00000234677.6@SARS	ENST00000234677.6	protein_coding	109213918,109223978,109228352,109229414,109230878,109231631,109235210,109235977,109236391,109237244,109237731	109214128,109224048,109228432,109229572,109231021,109231786,109235431,109236106,109236548,109237373,109238120	Gene ID= ENSG00000031698.12 TPM= 325.76 Transcript Type= protein_coding
chr1	109213982	109238148	109213982	109238148	+	ENST00000369923.4@SARS	ENST00000369923.4	protein_coding	109213982,109223978,109228352,109229414,109230878,109231631,109235210,109235977,109236391,109236805,109237244,109237731	109214128,109224048,109228432,109229572,109231021,109231786,109235431,109236106,109236548,109236870,109237373,109238148	Gene ID= ENSG00000031698.12 TPM= 2.34 Transcript Type= protein_coding
chr1	109241786	109242391	109241786	109242391	-	transcript7526.chr1.nnic@NA	transcript7526.chr1.nnic	NA	109241786	109242391	Gene ID= novel_gene_chr1_7527 TPM= 2.34 Transcript Type= NA
chr1	109279557	109283168	109279557	109283168	-	ENST00000369909.6@PSRC1	ENST00000369909.6	protein_coding	109283063,109282680,109282518,109281619,109281137,109280777,109280396,109279557	109283168,109282736,109282575,109282060,109281251,109281046,109280489,109280156	Gene ID= ENSG00000134222.16 TPM= 3.5 Transcript Type= protein_coding
chr1	109279556	109283113	109279556	109283113	-	transcript7530.chr1.nic@PSRC1	transcript7530.chr1.nic	protein_coding	109282680,109282518,109281619,109281137,109280777,109280396,109279556	109283113,109282575,109282060,109281251,109281046,109280489,109280156	Gene ID= ENSG00000134222.16 TPM= 2.34 Transcript Type= NA
chr1	109292365	109307094	109292365	109307094	-	transcript7567.chr1.nic@MYBPHL	transcript7567.chr1.nic	protein_coding	109306847,109298169,109297422,109297050,109296783,109296234,109295111,109294206,109292365	109307094,109298257,109297617,109297189,109296942,109296370,109295297,109294249,109292464	Gene ID= ENSG00000221986.6 TPM= 3.5 Transcript Type= NA
chr1	109309568	109393357	109309568	109393357	-	ENST00000538502.5@SORT1	ENST00000538502.5	protein_coding	109393027,109369530,109367408,109355367,109354367,109350929,109347483,109345751,109342014,109340724,109336240,109327499,109326992,109324899,109322932,109317853,109316850,109314672,109314261,109309568	109393357,109369589,109367481,109355469,109354531,109351002,109347532,109345878,109342158,109340879,109336346,109327601,109327160,109325089,109323121,109317969,109316958,109314778,109314384,109314057	Gene ID= ENSG00000134243.11 TPM= 19.94 Transcript Type= protein_coding
chr1	109309570	109397950	109309570	109397950	-	transcript7540.chr1.nic@SORT1	transcript7540.chr1.nic	protein_coding	109397587,109369530,109367408,109355367,109354367,109350929,109347483,109345751,109342014,109340724,109336240,109327499,109326992,109324899,109322932,109317853,109316850,109314672,109314261,109309570	109397950,109369589,109367481,109355469,109354531,109351002,109347532,109345878,109342158,109340879,109336346,109327601,109327160,109325089,109323121,109317969,109316958,109314778,109314384,109314057	Gene ID= ENSG00000134243.11 TPM= 60.81 Transcript Type= NA
chr1	109309570	109397951	109309570	109397951	-	ENST00000256637.7@SORT1	ENST00000256637.7	protein_coding	109397587,109369530,109367408,109355367,109354367,109350929,109347483,109345751,109342014,109340724,109336240,109327499,109326992,109324899,109322932,109317853,109316850,109314672,109314261,109309570	109397951,109369589,109367481,109355469,109354531,109351002,109347532,109345881,109342158,109340879,109336346,109327601,109327160,109325089,109323121,109317969,109316958,109314778,109314384,109314057	Gene ID= ENSG00000134243.11 TPM= 168.23 Transcript Type= protein_coding
chr1	109401850	109426449	109401850	109426449	-	transcript7572.chr1.nnic@PSMA5	transcript7572.chr1.nnic	protein_coding	109426420,109421860,109415237,109413068,109412077,109411877,109411011,109409928,109401850	109426449,109421926,109415363,109413135,109412184,109411935,109411113,109410014,109402090	Gene ID= ENSG00000143106.12 TPM= 5.84 Transcript Type= NA
chr1	109404184	109404311	109404184	109404311	+	transcript7577.chr1.nnic@NA	transcript7577.chr1.nnic	NA	109404184	109404311	Gene ID= novel_gene_chr1_7578 TPM= 2.34 Transcript Type= NA
chr1	109483892	109492734	109483892	109492734	+	transcript7581.chr1.nic@ATXN7L2	transcript7581.chr1.nic	protein_coding	109483892,109486057,109486506,109487007,109487518,109488383,109488847,109489930,109490271,109490922,109492586	109484080,109486122,109486610,109487217,109487804,109488465,109489100,109490128,109490392,109491717,109492734	Gene ID= ENSG00000162650.16 TPM= 3.5 Transcript Type= NA
chr1	109494115	109500440	109494115	109500440	+	ENST00000430195.2@CYB561D1	ENST00000430195.2	protein_coding	109494115,109494520,109495143,109495679	109494287,109494623,109495180,109500440	Gene ID= ENSG00000174151.14 TPM= 4.09 Transcript Type= protein_coding
chr1	109494099	109500433	109494099	109500433	+	ENST00000310611.8@CYB561D1	ENST00000310611.8	protein_coding	109494099,109494520,109495143,109495756	109494287,109494623,109495180,109500433	Gene ID= ENSG00000174151.14 TPM= 4.09 Transcript Type= protein_coding
chr1	109504175	109509682	109504175	109509682	-	ENST00000369864.4@AMIGO1	ENST00000369864.4	protein_coding	109509420,109504175	109509682,109508999	Gene ID= ENSG00000181754.6 TPM= 29.19 Transcript Type= protein_coding
chr1	109597898	109598106	109597898	109598106	+	transcript7597.chr1.nnic@NA	transcript7597.chr1.nnic	NA	109597898	109598106	Gene ID= novel_gene_chr1_7598 TPM= 2.34 Transcript Type= NA
chr1	109619861	109632051	109619861	109632051	+	transcript7606.chr1.nic@AMPD2	transcript7606.chr1.nic	protein_coding	109619861,109625662,109626160,109626319,109626726,109627175,109627429,109627774,109628083,109628364,109628643,109629109,109629327,109629796,109630233,109630683,109630943	109620278,109625792,109626228,109626427,109626912,109627316,109627518,109627903,109628277,109628495,109628806,109629235,109629490,109629916,109630406,109630793,109632051	Gene ID= ENSG00000116337.15 TPM= 8.56 Transcript Type= NA
chr1	109619837	109632051	109619837	109632051	+	ENST00000342115.8@AMPD2	ENST00000342115.8	protein_coding	109619837,109625303,109625662,109626160,109626319,109626726,109627175,109627429,109627774,109628083,109628364,109628643,109629109,109629327,109629796,109630233,109630683,109630943	109620278,109625433,109625792,109626228,109626427,109626912,109627316,109627518,109627903,109628277,109628495,109628806,109629235,109629490,109629916,109630406,109630793,109632051	Gene ID= ENSG00000116337.15 TPM= 28.99 Transcript Type= protein_coding
chr1	109620654	109632051	109620654	109632051	+	ENST00000256578.7@AMPD2	ENST00000256578.7	protein_coding	109620654,109625303,109625662,109626160,109626319,109626726,109627175,109627429,109627774,109628083,109628364,109628643,109629109,109629327,109629796,109630233,109630683,109630943	109621266,109625433,109625792,109626228,109626427,109626912,109627316,109627518,109627903,109628277,109628495,109628806,109629235,109629490,109629916,109630406,109630793,109632051	Gene ID= ENSG00000116337.15 TPM= 18.48 Transcript Type= protein_coding
chr1	109656081	109661700	109656081	109661700	+	ENST00000369836.8@GSTM4	ENST00000369836.8	protein_coding	109656081,109656712,109657215,109657590,109657772,109658814,109659000,109661165	109656425,109656787,109657279,109657671,109657872,109658909,109659110,109661700	Gene ID= ENSG00000168765.16 TPM= 21.6 Transcript Type= protein_coding
chr1	109656122	109665496	109656122	109665496	+	ENST00000326729.9@GSTM4	ENST00000326729.9	protein_coding	109656122,109656712,109657215,109657590,109657772,109658814,109659000,109665011	109656425,109656787,109657279,109657671,109657872,109658909,109659110,109665496	Gene ID= ENSG00000168765.16 TPM= 6.42 Transcript Type= protein_coding
chr1	109668066	109675286	109668066	109675286	+	ENST00000241337.8@GSTM2	ENST00000241337.8	protein_coding	109668066,109668425,109668925,109669290,109669471,109671287,109671473,109674747	109668151,109668500,109668989,109669371,109669571,109671382,109671583,109675286	Gene ID= ENSG00000213366.12 TPM= 16.35 Transcript Type= protein_coding
chr1	109712255	109718266	109712255	109718266	+	ENST00000256593.7@GSTM5	ENST00000256593.7	protein_coding	109712255,109712618,109713119,109713484,109713661,109714947,109715130,109717337	109712348,109712693,109713183,109713565,109713761,109715042,109715240,109718266	Gene ID= ENSG00000134201.10 TPM= 2.34 Transcript Type= protein_coding
chr1	109731686	109734186	109731686	109734186	-	transcript7630.chr1.nnic@NA	transcript7630.chr1.nnic	NA	109731686	109734186	Gene ID= novel_gene_chr1_7631 TPM= 3.5 Transcript Type= NA
chr1	109733932	109740516	109733932	109740516	-	ENST00000256594.7@GSTM3	ENST00000256594.7	protein_coding	109740240,109739833,109739429,109738285,109738091,109737656,109737457,109733932	109740516,109739908,109739493,109738366,109738191,109737751,109737567,109737169	Gene ID= ENSG00000134202.10 TPM= 4.67 Transcript Type= protein_coding
chr1	109736494	109741038	109736494	109741038	-	ENST00000361066.6@GSTM3	ENST00000361066.6	protein_coding	109740953,109740240,109739833,109739429,109738285,109738091,109737656,109737457,109736494	109741038,109740511,109739908,109739493,109738366,109738191,109737751,109737567,109737169	Gene ID= ENSG00000134202.10 TPM= 2.34 Transcript Type= protein_coding
chr1	109910633	109930992	109910633	109930992	+	ENST00000329608.10@CSF1	ENST00000329608.10	protein_coding	109910633,109914259,109915634,109917293,109921847,109923166,109924776,109925147,109928852	109911062,109914381,109915696,109917463,109921994,109924190,109924828,109925202,109930992	Gene ID= ENSG00000184371.13 TPM= 202.19 Transcript Type= protein_coding
chr1	109910899	109926743	109910899	109926743	+	ENST00000369802.7@CSF1	ENST00000369802.7	protein_coding	109910899,109914259,109915634,109917293,109921847,109923166,109924776,109925147,109926063	109911062,109914381,109915696,109917463,109921994,109924190,109924828,109925202,109926743	Gene ID= ENSG00000184371.13 TPM= 28.22 Transcript Type= protein_coding
chr1	109984686	110023735	109984686	110023735	+	ENST00000369799.9@AHCYL1	ENST00000369799.9	protein_coding	109984686,110009034,110011214,110012362,110012897,110014763,110015425,110016344,110016667,110017495,110017946,110018373,110018552,110019051,110019548,110020731,110021674	109985172,110009145,110011357,110012462,110012999,110014857,110015531,110016460,110016730,110017583,110018016,110018467,110018650,110019119,110019626,110020851,110023735	Gene ID= ENSG00000168710.17 TPM= 30.16 Transcript Type= protein_coding
chr1	109984765	110023741	109984765	110023741	+	ENST00000393614.8@AHCYL1	ENST00000393614.8	protein_coding	109984765,110009034,110011214,110012362,110012897,110014763,110015425,110016344,110016667,110017495,110017946,110018373,110018552,110019051,110019548,110020731,110021674	109985543,110009145,110011357,110012462,110012999,110014857,110015531,110016460,110016730,110017583,110018016,110018467,110018650,110019119,110019626,110020851,110023741	Gene ID= ENSG00000168710.17 TPM= 5.64 Transcript Type= protein_coding
chr1	110004131	110022389	110004131	110022389	+	ENST00000359172.3@AHCYL1	ENST00000359172.3	protein_coding	110004131,110009034,110011214,110012362,110012897,110014763,110015425,110016344,110016667,110017495,110017946,110018373,110018552,110019051,110019548,110020731,110021674	110004451,110009145,110011357,110012462,110012999,110014857,110015531,110016460,110016730,110017583,110018016,110018467,110018650,110019119,110019626,110020851,110022389	Gene ID= ENSG00000168710.17 TPM= 13.23 Transcript Type= protein_coding
chr1	110004163	110005771	110004163	110005771	+	transcript7666.chr1.nnic@NA	transcript7666.chr1.nnic	NA	110004163	110005771	Gene ID= novel_gene_chr1_7667 TPM= 2.34 Transcript Type= NA
chr1	110034594	110054641	110034594	110054641	+	transcript7672.chr1.nic@STRIP1	transcript7672.chr1.nic	protein_coding	110034594,110037891,110038683,110039172,110039395,110040635,110041536,110041734,110043088,110043639,110044840,110045015,110046680,110047542,110047772,110049112,110050343,110050956,110051683,110053665	110034817,110037960,110038757,110039306,110039515,110040703,110041642,110041861,110043270,110043856,110044905,110045078,110046751,110047616,110047869,110049560,110050409,110051060,110051887,110054641	Gene ID= ENSG00000143093.14 TPM= 11.68 Transcript Type= NA
chr1	110034594	110054641	110034594	110054641	+	transcript7673.chr1.nic@STRIP1	transcript7673.chr1.nic	protein_coding	110034594,110037891,110039172,110039395,110040635,110041536,110041734,110043088,110043639,110044840,110045015,110046680,110047542,110047772,110049112,110049460,110050343,110050956,110051683,110053665	110034817,110038757,110039306,110039515,110040703,110041642,110041861,110043270,110043856,110044905,110045078,110046751,110047616,110047869,110049238,110049560,110050409,110051060,110051887,110054641	Gene ID= ENSG00000143093.14 TPM= 6.42 Transcript Type= NA
chr1	110034616	110054641	110034616	110054641	+	ENST00000369795.7@STRIP1	ENST00000369795.7	protein_coding	110034616,110037891,110038683,110039172,110039395,110040635,110041536,110041734,110043088,110043639,110044840,110045015,110046680,110047542,110047772,110049112,110049460,110050343,110050956,110051683,110053665	110034817,110037960,110038757,110039306,110039515,110040703,110041642,110041861,110043270,110043856,110044905,110045078,110046751,110047616,110047869,110049238,110049560,110050409,110051060,110051887,110054641	Gene ID= ENSG00000143093.14 TPM= 68.3 Transcript Type= protein_coding
chr1	110058340	110062555	110058340	110062555	+	ENST00000554749.1@AL160006.1	ENST00000554749.1	antisense_RNA	110058340	110062555	Gene ID= ENSG00000258634.3 TPM= 9.34 Transcript Type= antisense_RNA
chr1	110210313	110248684	110210313	110248684	+	transcript7686.chr1.nnic@KCNC4	transcript7686.chr1.nnic	protein_coding	110210313,110222964,110225975,110247249	110212177,110223900,110226178,110248684	Gene ID= ENSG00000116396.14 TPM= 4.67 Transcript Type= NA
chr1	110339323	110346677	110339323	110346677	+	ENST00000487146.6@RBM15	ENST00000487146.6	protein_coding	110339323,110346308	110342268,110346677	Gene ID= ENSG00000162775.14 TPM= 9.34 Transcript Type= protein_coding
chr1	110339424	110346675	110339424	110346675	+	transcript7709.chr1.nnic@NA	transcript7709.chr1.nnic	NA	110339424	110346675	Gene ID= novel_gene_chr1_7710 TPM= 9.34 Transcript Type= NA
chr1	110362848	110391082	110362848	110391082	-	ENST00000369779.8@SLC16A4	ENST00000369779.8	protein_coding	110390865,110389237,110382834,110381652,110380982,110378853,110376950,110375458,110362848	110391082,110389355,110382966,110381795,110381143,110379356,110377161,110375551,110363893	Gene ID= ENSG00000168679.17 TPM= 8.64 Transcript Type= protein_coding
chr1	110362851	110391082	110362851	110391082	-	ENST00000541986.5@SLC16A4	ENST00000541986.5	protein_coding	110390865,110389237,110381652,110380982,110378853,110376950,110375458,110362851	110391082,110389355,110381795,110381143,110379356,110377161,110375551,110363893	Gene ID= ENSG00000168679.17 TPM= 2.22 Transcript Type= protein_coding
chr1	110362860	110391048	110362860	110391048	-	ENST00000369781.8@SLC16A4	ENST00000369781.8	protein_coding	110390865,110389237,110382834,110381652,110380982,110376950,110375458,110362860	110391048,110389355,110382966,110381795,110381143,110377161,110375551,110363893	Gene ID= ENSG00000168679.17 TPM= 1.63 Transcript Type= protein_coding
chr1	110362860	110391061	110362860	110391061	-	ENST00000461647.6@SLC16A4	ENST00000461647.6	protein_coding	110390865,110389237,110381652,110380982,110376950,110375458,110362860	110391061,110389355,110381795,110381143,110377161,110375551,110363893	Gene ID= ENSG00000168679.17 TPM= 1.63 Transcript Type= nonsense_mediated_decay
chr1	110362860	110391026	110362860	110391026	-	ENST00000472422.6@SLC16A4	ENST00000472422.6	protein_coding	110390865,110389237,110382834,110380982,110378853,110376950,110375458,110362860	110391026,110389355,110382966,110381143,110379356,110377161,110375551,110363893	Gene ID= ENSG00000168679.17 TPM= 2.22 Transcript Type= protein_coding
chr1	110401249	110407671	110401249	110407671	-	ENST00000474861.6@LAMTOR5	ENST00000474861.6	protein_coding	110407033,110406318,110403919,110401249	110407671,110406379,110404036,110401583	Gene ID= ENSG00000134248.13 TPM= 7.01 Transcript Type= protein_coding
chr1	110672465	110675033	110672465	110675033	-	ENST00000369769.3@KCNA3	ENST00000369769.3	protein_coding	110672465	110675033	Gene ID= ENSG00000177272.8 TPM= 9.34 Transcript Type= protein_coding
chr1	110873154	110899928	110873154	110899928	+	ENST00000271324.5@CD53	ENST00000271324.5	protein_coding	110873154,110891392,110892345,110894327,110894960,110896653,110897809,110899124	110873248,110891471,110892533,110894401,110895055,110896733,110897892,110899928	Gene ID= ENSG00000143119.12 TPM= 67.72 Transcript Type= protein_coding
chr1	110898164	110899917	110898164	110899917	+	transcript7726.chr1.nnic@NA	transcript7726.chr1.nnic	NA	110898164	110899917	Gene ID= novel_gene_chr1_7727 TPM= 2.34 Transcript Type= NA
chr1	110947185	110964079	110947185	110964079	-	ENST00000369763.4@LRIF1	ENST00000369763.4	protein_coding	110963621,110951288,110949851,110947185	110964079,110952815,110950123,110948399	Gene ID= ENSG00000121931.15 TPM= 10.51 Transcript Type= protein_coding
chr1	110947222	110963965	110947222	110963965	-	ENST00000485275.2@LRIF1	ENST00000485275.2	protein_coding	110963621,110949851,110947222	110963965,110950123,110948399	Gene ID= ENSG00000121931.15 TPM= 9.34 Transcript Type= protein_coding
chr1	111117147	111140158	111117147	111140158	-	transcript7748.chr1.nic@DRAM2	transcript7748.chr1.nic	protein_coding	111140038,111139501,111137523,111131424,111126227,111124742,111120516,111119877,111118805,111117147	111140158,111139666,111137586,111131568,111126294,111124881,111120693,111119959,111118897,111118267	Gene ID= ENSG00000156171.14 TPM= 5.84 Transcript Type= NA
chr1	111117147	111140178	111117147	111140178	-	transcript7749.chr1.nic@DRAM2	transcript7749.chr1.nic	protein_coding	111140038,111139501,111137523,111131424,111126227,111124742,111120516,111119877,111118805,111117147	111140178,111139711,111137586,111131568,111126294,111124881,111120693,111119959,111118897,111118267	Gene ID= ENSG00000156171.14 TPM= 2.34 Transcript Type= NA
chr1	111117907	111140210	111117907	111140210	-	transcript7754.chr1.nic@DRAM2	transcript7754.chr1.nic	protein_coding	111140038,111139501,111137523,111131424,111126227,111122616,111120516,111119877,111118805,111117907	111140210,111139666,111137586,111131568,111126294,111122643,111120693,111119959,111118897,111118267	Gene ID= ENSG00000156171.14 TPM= 2.34 Transcript Type= NA
chr1	111125378	111140090	111125378	111140090	-	ENST00000490780.5@DRAM2	ENST00000490780.5	protein_coding	111140038,111139501,111137523,111131424,111126227,111125378	111140090,111139666,111137586,111131568,111126294,111125650	Gene ID= ENSG00000156171.14 TPM= 1.17 Transcript Type= processed_transcript
chr1	111140226	111185102	111140226	111185102	+	ENST00000357172.8@CEPT1	ENST00000357172.8	protein_coding	111140226,111147642,111159380,111161155,111174879,111182187,111182799,111183462,111184191	111140307,111148053,111159527,111161296,111174963,111182318,111182957,111183587,111185102	Gene ID= ENSG00000134255.13 TPM= 28.61 Transcript Type= protein_coding
chr1	111178214	111185100	111178214	111185100	+	ENST00000467362.1@CEPT1	ENST00000467362.1	protein_coding	111178214,111182799,111183462,111184191	111182318,111182957,111183587,111185100	Gene ID= ENSG00000134255.13 TPM= 3.5 Transcript Type= processed_transcript
chr1	111139627	111185102	111139627	111185102	+	ENST00000545121.5@CEPT1	ENST00000545121.5	protein_coding	111139627,111147642,111159380,111161155,111174879,111182187,111182799,111183462,111184191	111139761,111148053,111159527,111161296,111174963,111182318,111182957,111183587,111185102	Gene ID= ENSG00000134255.13 TPM= 4.09 Transcript Type= protein_coding
chr1	111187174	111204407	111187174	111204407	-	transcript7735.chr1.nnic@DENND2D	transcript7735.chr1.nnic	protein_coding	111204296,111199623,111198630,111197706,111197176,111195916,111194578,111192140,111189212,111188702,111188131,111187174	111204407,111199798,111198742,111197989,111197253,111196056,111194726,111192317,111189253,111188786,111188370,111187681	Gene ID= ENSG00000162777.16 TPM= 2.92 Transcript Type= NA
chr1	111187174	111200689	111187174	111200689	-	ENST00000357640.8@DENND2D	ENST00000357640.8	protein_coding	111200393,111199623,111198630,111197920,111197176,111195916,111194578,111192140,111189212,111188702,111188131,111187174	111200689,111199798,111198742,111197989,111197253,111196056,111194726,111192317,111189253,111188786,111188370,111187681	Gene ID= ENSG00000162777.16 TPM= 2.04 Transcript Type= protein_coding
chr1	111187174	111204366	111187174	111204366	-	transcript7739.chr1.nic@DENND2D	transcript7739.chr1.nic	protein_coding	111204146,111199623,111198630,111197920,111197176,111195916,111194578,111192140,111189212,111188702,111188131,111187174	111204366,111199798,111198742,111197989,111197253,111196056,111194726,111192317,111189253,111188786,111188370,111187681	Gene ID= ENSG00000162777.16 TPM= 3.21 Transcript Type= NA
chr1	111187174	111200138	111187174	111200138	-	transcript7743.chr1.nnic@DENND2D	transcript7743.chr1.nnic	protein_coding	111199623,111198630,111197706,111197176,111195916,111194578,111192140,111189212,111188702,111188131,111187174	111200138,111198742,111197989,111197253,111196056,111194726,111192317,111189253,111188786,111188370,111187681	Gene ID= ENSG00000162777.16 TPM= 4.09 Transcript Type= NA
chr1	111187174	111200211	111187174	111200211	-	transcript7744.chr1.nic@DENND2D	transcript7744.chr1.nic	protein_coding	111199623,111198630,111197920,111197176,111195916,111194578,111192140,111189212,111188702,111188131,111187174	111200211,111198742,111197989,111197253,111196056,111194726,111192317,111189253,111188786,111188370,111187681	Gene ID= ENSG00000162777.16 TPM= 7.88 Transcript Type= NA
chr1	111187174	111204409	111187174	111204409	-	ENST00000369752.5@DENND2D	ENST00000369752.5	protein_coding	111204296,111199623,111198630,111197920,111197176,111195916,111194578,111192140,111189212,111188702,111188131,111187174	111204409,111199798,111198742,111197989,111197253,111196056,111194726,111192317,111189253,111188786,111188370,111187681	Gene ID= ENSG00000162777.16 TPM= 18.39 Transcript Type= protein_coding
chr1	111438637	111449249	111438637	111449249	-	transcript7796.chr1.nnic@WDR77	transcript7796.chr1.nnic	protein_coding	111449055,111448619,111447435,111447095,111444054,111443867,111443323,111442653,111442025,111441211,111438637	111449249,111448804,111447576,111447144,111444124,111443921,111443394,111442761,111442093,111441389,111438825	Gene ID= ENSG00000116455.13 TPM= 2.34 Transcript Type= NA
chr1	111440259	111449250	111440259	111449250	-	transcript7797.chr1.nic@WDR77	transcript7797.chr1.nic	protein_coding	111449055,111448619,111447435,111447095,111444054,111443867,111443323,111442653,111442025,111441499,111440259	111449250,111448804,111447576,111447144,111444124,111443921,111443394,111442761,111442093,111441604,111441389	Gene ID= ENSG00000116455.13 TPM= 2.34 Transcript Type= NA
chr1	111440275	111449220	111440275	111449220	-	transcript7799.chr1.nic@WDR77	transcript7799.chr1.nic	protein_coding	111449055,111448619,111447435,111447095,111444054,111443867,111443323,111442653,111442025,111440275	111449220,111448804,111447576,111447144,111444124,111443921,111443394,111442761,111442093,111441604	Gene ID= ENSG00000116455.13 TPM= 2.34 Transcript Type= NA
chr1	111439890	111449376	111439890	111449376	-	ENST00000235090.9@WDR77	ENST00000235090.9	protein_coding	111449055,111448619,111447435,111447095,111444054,111443867,111443323,111442653,111442025,111439890	111449376,111448804,111447576,111447144,111444124,111443921,111443394,111442761,111442093,111441389	Gene ID= ENSG00000116455.13 TPM= 24.52 Transcript Type= protein_coding
chr1	111448936	111462773	111448936	111462773	+	ENST00000369722.7@ATP5F1	ENST00000369722.7	protein_coding	111448936,111449837,111454211,111456086,111456630,111459457,111460917	111449581,111449873,111454356,111456249,111456755,111459636,111462773	Gene ID= ENSG00000116459.10 TPM= 127.27 Transcript Type= protein_coding
chr1	111449465	111461332	111449465	111461332	+	ENST00000369721.8@ATP5F1	ENST00000369721.8	protein_coding	111449465,111449837,111456086,111456630,111459457,111460917	111449581,111449873,111456249,111456755,111459636,111461332	Gene ID= ENSG00000116459.10 TPM= 4.67 Transcript Type= processed_transcript
chr1	111473869	111478472	111473869	111478472	+	ENST00000369718.3@C1orf162	ENST00000369718.3	protein_coding	111473869,111476018,111476798,111477334,111477726,111477983	111474030,111476065,111476867,111477428,111477775,111478472	Gene ID= ENSG00000143110.11 TPM= 44.37 Transcript Type= protein_coding
chr1	111499429	111503760	111499429	111503760	-	ENST00000241356.4@ADORA3	ENST00000241356.4	protein_coding	111503005,111499429	111503760,111500556	Gene ID= ENSG00000282608.1 TPM= 9.34 Transcript Type= protein_coding
chr1	111619779	111713113	111619779	111713113	+	transcript7826.chr1.nic@RAP1A	transcript7826.chr1.nic	protein_coding	111619779,111627470,111691334,111695341,111697441,111703336,111704343,111709149,111712431	111619934,111627563,111691417,111695409,111697497,111703476,111704486,111709264,111713113	Gene ID= ENSG00000116473.14 TPM= 5.84 Transcript Type= NA
chr1	111619783	111716691	111619783	111716691	+	ENST00000369709.3@RAP1A	ENST00000369709.3	protein_coding	111619783,111691334,111695341,111697441,111703336,111704343,111709149,111712431	111619934,111691417,111695409,111697497,111703476,111704486,111709264,111716691	Gene ID= ENSG00000116473.14 TPM= 9.34 Transcript Type= protein_coding
chr1	111688099	111689832	111688099	111689832	-	transcript7844.chr1.nnic@NA	transcript7844.chr1.nnic	NA	111688099	111689832	Gene ID= novel_gene_chr1_7845 TPM= 2.34 Transcript Type= NA
chr1	111699630	111701177	111699630	111701177	-	transcript7846.chr1.nnic@NA	transcript7846.chr1.nnic	NA	111699630	111701177	Gene ID= novel_gene_chr1_7847 TPM= 2.34 Transcript Type= NA
chr1	111722064	111739424	111722064	111739424	-	ENST00000357260.5@FAM212B	ENST00000357260.5	protein_coding	111739186,111722064	111739424,111727804	Gene ID= ENSG00000197852.9 TPM= 3.5 Transcript Type= protein_coding
chr1	111739841	111747798	111739841	111747798	+	ENST00000430373.1@FAM212B-AS1	ENST00000430373.1	antisense_RNA	111739841,111744375,111746060	111740077,111744529,111747798	Gene ID= ENSG00000227811.2 TPM= 1.17 Transcript Type= antisense_RNA
chr1	111755305	111768016	111755305	111768016	+	ENST00000369702.4@DDX20	ENST00000369702.4	protein_coding	111755305,111756646,111759400,111760474,111760706,111760987,111761226,111762255,111762677,111762906,111765737	111756225,111756740,111759568,111760588,111760848,111761125,111761284,111762337,111762782,111763007,111768016	Gene ID= ENSG00000064703.11 TPM= 21.02 Transcript Type= protein_coding
chr1	111755903	111767263	111755903	111767263	+	transcript7862.chr1.nic@DDX20	transcript7862.chr1.nic	protein_coding	111755903,111756646,111759400,111760474,111760706,111762255,111762677,111762906,111765737	111756225,111756740,111759568,111760588,111761284,111762337,111762782,111763007,111767263	Gene ID= ENSG00000064703.11 TPM= 2.34 Transcript Type= NA
chr1	112396181	112461164	112396181	112461164	+	ENST00000271277.10@CTTNBP2NL	ENST00000271277.10	protein_coding	112396181,112412194,112416157,112448942,112454449,112455931	112396272,112412317,112416264,112449172,112454556,112461164	Gene ID= ENSG00000143079.14 TPM= 23.35 Transcript Type= protein_coding
chr1	112466129	112493649	112466129	112493649	+	transcript7878.chr1.nnic@WNT2B	transcript7878.chr1.nnic	protein_coding	112466129,112491011,112492950	112467591,112491081,112493649	Gene ID= ENSG00000134245.17 TPM= 2.34 Transcript Type= NA
chr1	112619173	112671619	112619173	112671619	+	ENST00000263168.3@CAPZA1	ENST00000263168.3	protein_coding	112619173,112647210,112649418,112653598,112654465,112659022,112659701,112667074,112669543,112669992	112619883,112647273,112649469,112653661,112654671,112659101,112659779,112667145,112669605,112671619	Gene ID= ENSG00000116489.12 TPM= 151.79 Transcript Type= protein_coding
chr1	112674421	112700746	112674421	112700746	+	ENST00000413052.6@MOV10	ENST00000413052.6	protein_coding	112674421,112674832,112688935,112689415,112689840,112691665,112692761,112694018,112694453,112694749,112695416,112696148,112696437,112696630,112697994,112698287,112698715,112699685,112699894,112700219,112700416	112674729,112675049,112689138,112689650,112690098,112691799,112692929,112694172,112694629,112694896,112695574,112696251,112696534,112696846,112698111,112698478,112698789,112699810,112699982,112700340,112700746	Gene ID= ENSG00000155363.18 TPM= 9.05 Transcript Type= protein_coding
chr1	112674898	112700739	112674898	112700739	+	transcript7907.chr1.nnic@MOV10	transcript7907.chr1.nnic	protein_coding	112674898,112686966,112688935,112689415,112689840,112691665,112692761,112694018,112694453,112694749,112695416,112696148,112696437,112696630,112697994,112698287,112698715,112699685,112699894,112700219,112700416	112675049,112687106,112689138,112689650,112690098,112691799,112692929,112694172,112694629,112694896,112695574,112696251,112696534,112696846,112698111,112698478,112698789,112699810,112699982,112700340,112700739	Gene ID= ENSG00000155363.18 TPM= 6.71 Transcript Type= NA
chr1	112693667	112702377	112693667	112702377	+	transcript7918.chr1.nnic@MOV10	transcript7918.chr1.nnic	protein_coding	112693667,112694453,112694749,112695416,112696148,112696430,112696630,112697994,112698287,112698715,112699894,112700219,112700416	112694172,112694629,112694896,112695574,112696241,112696534,112696846,112698111,112698478,112699810,112699982,112700340,112702377	Gene ID= ENSG00000155363.18 TPM= 9.34 Transcript Type= NA
chr1	112674487	112700739	112674487	112700739	+	ENST00000369645.5@MOV10	ENST00000369645.5	protein_coding	112674487,112674848,112688935,112689415,112689840,112691665,112692761,112694018,112694453,112694749,112695416,112696148,112696437,112696630,112697994,112698287,112698715,112699685,112699894,112700219,112700416	112674729,112675049,112689138,112689650,112690098,112691799,112692929,112694172,112694629,112694896,112695574,112696251,112696534,112696846,112698111,112698478,112698789,112699810,112699982,112700340,112700739	Gene ID= ENSG00000155363.18 TPM= 37.07 Transcript Type= protein_coding
chr1	112674745	112700710	112674745	112700710	+	ENST00000357443.2@MOV10	ENST00000357443.2	protein_coding	112674745,112688935,112689415,112689840,112691665,112692761,112694018,112694453,112694749,112695416,112696148,112696437,112696630,112697994,112698287,112698715,112699685,112699894,112700219,112700416	112675049,112689138,112689650,112690098,112691799,112692929,112694172,112694629,112694896,112695574,112696251,112696534,112696846,112698111,112698478,112698789,112699810,112699982,112700340,112700710	Gene ID= ENSG00000155363.18 TPM= 3.21 Transcript Type= protein_coding
chr1	112701106	112707403	112701106	112707403	-	ENST00000339083.11@RHOC	ENST00000339083.11	protein_coding	112707078,112705100,112703644,112702999,112702563,112701106	112707403,112705168,112703806,112703119,112702693,112701713	Gene ID= ENSG00000155366.16 TPM= 151.79 Transcript Type= protein_coding
chr1	112701131	112707434	112701131	112707434	-	ENST00000369642.7@RHOC	ENST00000369642.7	protein_coding	112707078,112703644,112702999,112702563,112701131	112707434,112703806,112703119,112702693,112701713	Gene ID= ENSG00000155366.16 TPM= 71.22 Transcript Type= protein_coding
chr1	112709994	112715477	112709994	112715477	-	ENST00000309276.10@PPM1J	ENST00000309276.10	protein_coding	112714976,112713497,112712744,112712345,112711971,112711266,112711008,112710744,112710460,112709994	112715477,112713611,112713031,112712457,112712055,112711384,112711071,112710851,112710611,112710310	Gene ID= ENSG00000155367.15 TPM= 2.34 Transcript Type= protein_coding
chr1	112911852	112956063	112911852	112956063	-	ENST00000538576.5@SLC16A1	ENST00000538576.5	protein_coding	112955276,112929092,112921990,112917178,112911852	112956063,112929352,112922133,112918044,112914165	Gene ID= ENSG00000155380.11 TPM= 1.17 Transcript Type= protein_coding
chr1	113390466	113550777	113390466	113550777	+	transcript7968.chr1.nic@MAGI3	transcript7968.chr1.nic	protein_coding	113390466,113549515	113391349,113550777	Gene ID= ENSG00000081026.18 TPM= 3.5 Transcript Type= NA
chr1	113407574	113412028	113407574	113412028	-	transcript7969.chr1.nnic@NA	transcript7969.chr1.nnic	NA	113407574	113412028	Gene ID= novel_gene_chr1_7970 TPM= 5.84 Transcript Type= NA
chr1	113510357	113513454	113510357	113513454	-	transcript7971.chr1.nnic@NA	transcript7971.chr1.nnic	NA	113510357	113513454	Gene ID= novel_gene_chr1_7972 TPM= 2.34 Transcript Type= NA
chr1	113691133	113692739	113691133	113692739	+	transcript8003.chr1.nnic@NA	transcript8003.chr1.nnic	NA	113691133	113692739	Gene ID= novel_gene_chr1_8004 TPM= 3.5 Transcript Type= NA
chr1	113697205	113759546	113697205	113759546	-	transcript7980.chr1.nnic@PHTF1	transcript7980.chr1.nnic	protein_coding	113758659,113757699,113749506,113738730,113738110,113726418,113724759,113713279,113711940,113711746,113710254,113706594,113705890,113704666,113704081,113700794,113699704,113698262,113697205	113759546,113757755,113749589,113738799,113738268,113726574,113724893,113713438,113712113,113711835,113710475,113706722,113706162,113704797,113704167,113700949,113699799,113698387,113697725	Gene ID= ENSG00000116793.15 TPM= 4.67 Transcript Type= NA
chr1	113705765	113759482	113705765	113759482	-	transcript7994.chr1.nnic@PHTF1	transcript7994.chr1.nnic	protein_coding	113758659,113757699,113754272,113738730,113738110,113726418,113724759,113713279,113711940,113711746,113710254,113706594,113705765	113759482,113757755,113754403,113738799,113738268,113726574,113724893,113713438,113712113,113711835,113710475,113706722,113706162	Gene ID= ENSG00000116793.15 TPM= 2.34 Transcript Type= NA
chr1	113705765	113759459	113705765	113759459	-	transcript7995.chr1.nic@PHTF1	transcript7995.chr1.nic	protein_coding	113759023,113758659,113757699,113738730,113738110,113726418,113724759,113713279,113711940,113711746,113710254,113706594,113705765	113759459,113758733,113757755,113738799,113738268,113726574,113724893,113713438,113712113,113711835,113710475,113706722,113706162	Gene ID= ENSG00000116793.15 TPM= 2.34 Transcript Type= NA
chr1	113761832	113812476	113761832	113812476	-	ENST00000261441.9@RSBN1	ENST00000261441.9	protein_coding	113811710,113797363,113777671,113777210,113768222,113767099,113761832	113812476,113798036,113777808,113777352,113768389,113767207,113766453	Gene ID= ENSG00000081019.13 TPM= 11.68 Transcript Type= protein_coding
chr1	113765848	113812289	113765848	113812289	-	ENST00000615321.1@RSBN1	ENST00000615321.1	protein_coding	113811710,113797363,113777671,113777210,113768222,113767099,113765848	113812289,113798036,113777808,113777352,113768389,113767207,113766453	Gene ID= ENSG00000081019.13 TPM= 1.17 Transcript Type= protein_coding
chr1	113813811	113871759	113813811	113871759	-	ENST00000359785.9@PTPN22	ENST00000359785.9	protein_coding	113871537,113859352,113859002,113858478,113857738,113856548,113856382,113854907,113854471,113852027,113848540,113838544,113837590,113834910,113834309,113833111,113829949,113829592,113825142,113819577,113813811	113871759,113859460,113859078,113858573,113857776,113856619,113856441,113855049,113854537,113852104,113848626,113838620,113838407,113834993,113834439,113833138,113830029,113829707,113825172,113819654,113814969	Gene ID= ENSG00000134242.15 TPM= 7.59 Transcript Type= protein_coding
chr1	113819299	113871712	113819299	113871712	-	ENST00000420377.6@PTPN22	ENST00000420377.6	protein_coding	113871537,113859352,113859002,113858478,113857738,113856548,113856382,113854907,113854471,113852027,113848540,113838544,113837590,113834910,113834309,113833111,113829949,113829592,113825142,113819299	113871712,113859460,113859078,113858573,113857776,113856619,113856441,113855049,113854537,113852104,113848626,113838620,113838407,113834993,113834439,113833138,113830029,113829707,113825172,113819654	Gene ID= ENSG00000134242.15 TPM= 1.75 Transcript Type= protein_coding
chr1	113894748	113904998	113894748	113904998	-	ENST00000369569.5@AP4B1	ENST00000369569.5	protein_coding	113904605,113902638,113901755,113901236,113899904,113898718,113897840,113896258,113895757,113894748	113904998,113902862,113901885,113901383,113900400,113898801,113897943,113896465,113896038,113895492	Gene ID= ENSG00000134262.12 TPM= 3.5 Transcript Type= protein_coding
chr1	113895056	113905048	113895056	113905048	-	transcript8027.chr1.nic@AP4B1	transcript8027.chr1.nic	protein_coding	113904942,113901755,113901236,113899904,113898718,113897840,113896258,113895757,113895056	113905048,113904793,113901383,113900400,113898801,113897943,113896465,113896038,113895492	Gene ID= ENSG00000134262.12 TPM= 2.92 Transcript Type= NA
chr1	113895056	113904899	113895056	113904899	-	transcript8029.chr1.nic@AP4B1	transcript8029.chr1.nic	protein_coding	113901755,113901236,113899904,113898718,113897840,113896258,113895757,113895056	113904899,113901383,113900400,113898801,113897943,113896465,113896038,113895492	Gene ID= ENSG00000134262.12 TPM= 2.92 Transcript Type= NA
chr1	113894748	113905070	113894748	113905070	-	ENST00000256658.8@AP4B1	ENST00000256658.8	protein_coding	113904942,113904605,113902638,113901755,113901236,113899904,113898718,113897840,113896258,113895757,113894748	113905070,113904793,113902862,113901885,113901383,113900400,113898801,113897943,113896465,113896038,113895492	Gene ID= ENSG00000134262.12 TPM= 1.17 Transcript Type= protein_coding
chr1	113929710	113977804	113929710	113977804	+	ENST00000369558.5@HIPK1	ENST00000369558.5	protein_coding	113929710,113940382,113952766,113954651,113955563,113956627,113957124,113958066,113962317,113963387,113966130,113967766,113968442,113969956,113971824,113973024	113929939,113941459,113952889,113954770,113955649,113956811,113957286,113958291,113962438,113963521,113966272,113967948,113968648,113970197,113971954,113977804	Gene ID= ENSG00000163349.21 TPM= 78.23 Transcript Type= protein_coding
chr1	113979443	113982254	113979443	113982254	+	ENST00000320334.4@OLFML3	ENST00000320334.4	protein_coding	113979443,113980332,113980949	113979630,113980617,113982254	Gene ID= ENSG00000116774.11 TPM= 44.95 Transcript Type= protein_coding
chr1	113979491	113982254	113979491	113982254	+	ENST00000491700.1@OLFML3	ENST00000491700.1	protein_coding	113979491,113980332	113979630,113982254	Gene ID= ENSG00000116774.11 TPM= 23.94 Transcript Type= processed_transcript
chr1	114397608	114511246	114397608	114511246	-	transcript8055.chr1.nic@TRIM33	transcript8055.chr1.nic	protein_coding	114510551,114464270,114463412,114463104,114433617,114430798,114427748,114427177,114425449,114424591,114421436,114420380,114410184,114408677,114406941,114405410,114402760,114401389,114399457,114397608	114511246,114464388,114463556,114463236,114433733,114430912,114427894,114427294,114425723,114424755,114421636,114420451,114410316,114408740,114407100,114405759,114402883,114401463,114399609,114397860	Gene ID= ENSG00000197323.11 TPM= 6.42 Transcript Type= NA
chr1	114460574	114511246	114460574	114511246	-	transcript8063.chr1.nic@TRIM33	transcript8063.chr1.nic	protein_coding	114510551,114464270,114463412,114460574	114511246,114464388,114463556,114463236	Gene ID= ENSG00000197323.11 TPM= 2.92 Transcript Type= NA
chr1	114397608	114511160	114397608	114511160	-	ENST00000369543.6@TRIM33	ENST00000369543.6	protein_coding	114510551,114464270,114463412,114463104,114433617,114430798,114427748,114427177,114425449,114424591,114421436,114410184,114408677,114406941,114405410,114402760,114401389,114399457,114397608	114511160,114464388,114463556,114463236,114433733,114430912,114427894,114427294,114425723,114424755,114421636,114410316,114408740,114407100,114405759,114402883,114401463,114399609,114397860	Gene ID= ENSG00000197323.11 TPM= 18.68 Transcript Type= protein_coding
chr1	114567557	114581639	114567557	114581639	-	ENST00000369541.3@BCAS2	ENST00000369541.3	protein_coding	114581499,114581299,114576688,114575590,114570700,114569992,114567557	114581639,114581391,114576758,114575751,114570750,114570072,114568256	Gene ID= ENSG00000116752.5 TPM= 22.18 Transcript Type= protein_coding
chr1	114584275	114670054	114584275	114670054	-	transcript8070.chr1.nic@DENND2C	transcript8070.chr1.nic	protein_coding	114669983,114625179,114623507,114622987,114621895,114618386,114611073,114608686,114604922,114602125,114601508,114600820,114600204,114599274,114595832,114594473,114587716,114587387,114584275	114670054,114626188,114623643,114623099,114622065,114618482,114611117,114608873,114605031,114602194,114601585,114600960,114600352,114599451,114595873,114594578,114587952,114587473,114585631	Gene ID= ENSG00000175984.14 TPM= 4.67 Transcript Type= NA
chr1	114704469	114716894	114704469	114716894	-	ENST00000369535.4@NRAS	ENST00000369535.4	protein_coding	114716658,114716050,114713800,114709569,114708531,114708154,114704469	114716894,114716177,114713978,114709728,114708654,114708192,114708050	Gene ID= ENSG00000213281.4 TPM= 32.11 Transcript Type= protein_coding
chr1	114704469	114716775	114704469	114716775	-	transcript8074.chr1.nnic@NRAS	transcript8074.chr1.nnic	protein_coding	114716658,114716050,114709569,114708531,114708154,114704469	114716775,114716177,114709728,114708654,114708192,114708050	Gene ID= ENSG00000213281.4 TPM= 8.76 Transcript Type= NA
chr1	114716914	114758050	114716914	114758050	-	ENST00000610726.4@CSDE1	ENST00000610726.4	protein_coding	114757925,114749821,114741527,114739692,114737963,114737471,114736758,114734442,114733989,114733732,114732604,114730508,114730258,114726983,114726211,114725221,114723883,114720539,114719579,114718613,114716914	114758050,114750207,114741673,114739890,114738072,114737563,114736855,114734523,114734117,114733857,114732816,114730648,114730422,114727090,114726386,114725333,114724002,114720717,114719742,114718745,114718216	Gene ID= ENSG00000009307.15 TPM= 5.06 Transcript Type= protein_coding
chr1	114716913	114757983	114716913	114757983	-	ENST00000339438.10@CSDE1	ENST00000339438.10	protein_coding	114757925,114749821,114739692,114737963,114736758,114734442,114733989,114733732,114732604,114730508,114730258,114726983,114726211,114725221,114723883,114720539,114719579,114718613,114716913	114757983,114750207,114739890,114738072,114736855,114734523,114734117,114733857,114732816,114730648,114730422,114727090,114726386,114725333,114724002,114720717,114719742,114718745,114718216	Gene ID= ENSG00000009307.15 TPM= 278.27 Transcript Type= protein_coding
chr1	114716917	114757964	114716917	114757964	-	ENST00000358528.8@CSDE1	ENST00000358528.8	protein_coding	114757925,114749821,114739692,114737963,114737471,114736758,114734442,114733989,114733732,114732604,114730508,114730258,114726983,114726211,114725221,114723883,114720539,114719579,114718613,114716917	114757964,114750207,114739890,114738072,114737563,114736855,114734523,114734117,114733857,114732816,114730648,114730422,114727090,114726386,114725333,114724002,114720717,114719742,114718745,114718216	Gene ID= ENSG00000009307.15 TPM= 36.58 Transcript Type= protein_coding
chr1	114717305	114758027	114717305	114758027	-	ENST00000530886.5@CSDE1	ENST00000530886.5	protein_coding	114757925,114749821,114737963,114736758,114734442,114733989,114733732,114732604,114730508,114730258,114726983,114726211,114725221,114723883,114720539,114719579,114718613,114717305	114758027,114750207,114738072,114736855,114734523,114734117,114733857,114732816,114730648,114730422,114727090,114726386,114725333,114724002,114720717,114719742,114718745,114718216	Gene ID= ENSG00000009307.15 TPM= 6.81 Transcript Type= protein_coding
chr1	114717295	114757974	114717295	114757974	-	ENST00000261443.9@CSDE1	ENST00000261443.9	protein_coding	114757925,114739692,114737963,114736758,114734442,114733989,114733732,114732604,114730508,114730258,114726983,114726211,114725221,114723883,114720539,114719579,114718613,114717295	114757974,114739890,114738072,114736855,114734523,114734117,114733857,114732816,114730648,114730422,114727090,114726386,114725333,114724002,114720717,114719742,114718745,114718216	Gene ID= ENSG00000009307.15 TPM= 6.81 Transcript Type= protein_coding
chr1	114769479	114780685	114769479	114780685	-	ENST00000369528.9@SIKE1	ENST00000369528.9	protein_coding	114780437,114780110,114779142,114776346,114769479	114780685,114780215,114779284,114776459,114774372	Gene ID= ENSG00000052723.11 TPM= 17.51 Transcript Type= protein_coding
chr1	114772775	114780677	114772775	114780677	-	ENST00000060969.5@SIKE1	ENST00000060969.5	protein_coding	114780449,114780110,114779142,114776346,114772775	114780677,114780215,114779284,114776459,114774372	Gene ID= ENSG00000052723.11 TPM= 4.67 Transcript Type= protein_coding
chr1	115048011	115089464	115048011	115089464	-	ENST00000369516.6@TSPAN2	ENST00000369516.6	protein_coding	115089364,115072905,115062135,115060464,115058883,115057537,115053379,115048011	115089464,115073007,115062232,115060538,115058981,115057608,115053462,115050555	Gene ID= ENSG00000134198.9 TPM= 8.17 Transcript Type= protein_coding
chr1	115285918	115338236	115285918	115338236	-	ENST00000369512.2@NGF	ENST00000369512.2	protein_coding	115338204,115293627,115285918	115338236,115293750,115286807	Gene ID= ENSG00000134259.3 TPM= 2.34 Transcript Type= protein_coding
chr1	115641953	115698224	115641953	115698224	+	ENST00000355485.6@VANGL1	ENST00000355485.6	protein_coding	115641953,115651277,115659641,115663661,115682364,115683944,115685293,115691119	115642086,115651484,115659773,115664268,115682497,115684076,115685527,115698224	Gene ID= ENSG00000173218.14 TPM= 7.01 Transcript Type= protein_coding
chr1	115836378	115839424	115836378	115839424	-	transcript8135.chr1.nnic@NA	transcript8135.chr1.nnic	NA	115836378	115839424	Gene ID= novel_gene_chr1_8136 TPM= 2.34 Transcript Type= NA
chr1	115976307	115977406	115976307	115977406	-	transcript8159.chr1.nnic@NA	transcript8159.chr1.nnic	NA	115976307	115977406	Gene ID= novel_gene_chr1_8160 TPM= 2.34 Transcript Type= NA
chr1	115976498	116070054	115976498	116070054	+	ENST00000369503.8@SLC22A15	ENST00000369503.8	protein_coding	115976498,115992031,116019582,116020721,116026893,116031366,116035187,116037303,116062762,116064436,116066520,116067019	115976714,115992243,116019714,116020885,116027022,116031581,116035327,116037388,116062882,116064508,116066708,116070054	Gene ID= ENSG00000163393.12 TPM= 2.34 Transcript Type= protein_coding
chr1	116373867	116404772	116373867	116404772	+	ENST00000537345.5@ATP1A1	ENST00000537345.5	protein_coding	116373867,116384014,116384783,116387288,116388131,116388638,116388902,116389439,116390213,116390782,116392854,116393531,116395110,116396598,116397888,116398621,116398930,116399420,116400861,116401130,116401554,116403884,116404416	116374241,116384124,116384842,116387491,116388244,116388772,116389019,116389707,116390411,116390891,116392988,116393723,116395285,116396734,116398038,116398789,116399084,116399543,116401006,116401260,116401655,116403975,116404772	Gene ID= ENSG00000163399.15 TPM= 49.13 Transcript Type= protein_coding
chr1	116373260	116404774	116373260	116404774	+	ENST00000295598.9@ATP1A1	ENST00000295598.9	protein_coding	116373260,116384014,116384783,116387288,116388131,116388638,116388902,116389439,116390213,116390782,116392854,116393531,116395110,116396598,116397888,116398621,116398930,116399420,116400861,116401130,116401554,116403884,116404416	116373523,116384124,116384842,116387491,116388244,116388772,116389019,116389707,116390411,116390891,116392988,116393723,116395285,116396734,116398038,116398789,116399084,116399543,116401006,116401260,116401655,116403975,116404774	Gene ID= ENSG00000163399.15 TPM= 587.39 Transcript Type= protein_coding
chr1	116373269	116386144	116373269	116386144	+	ENST00000488733.1@ATP1A1	ENST00000488733.1	protein_coding	116373269,116384014,116384783	116373523,116384124,116386144	Gene ID= ENSG00000163399.15 TPM= 12.84 Transcript Type= retained_intron
chr1	116373244	116375141	116373244	116375141	+	transcript8188.chr1.nnic@NA	transcript8188.chr1.nnic	NA	116373244	116375141	Gene ID= novel_gene_chr1_8189 TPM= 4.67 Transcript Type= NA
chr1	116514535	116570924	116514535	116570924	-	transcript8194.chr1.nnic@CD58	transcript8194.chr1.nnic	protein_coding	116570323,116544311,116535965,116521906,116519231,116514535	116570924,116544604,116536228,116521983,116519302,116514822	Gene ID= ENSG00000116815.15 TPM= 2.34 Transcript Type= NA
chr1	116514535	116571039	116514535	116571039	-	ENST00000369489.9@CD58	ENST00000369489.9	protein_coding	116570903,116544311,116535965,116521906,116519231,116514535	116571039,116544604,116536228,116521983,116519267,116514822	Gene ID= ENSG00000116815.15 TPM= 42.03 Transcript Type= protein_coding
chr1	116521787	116571039	116521787	116571039	-	ENST00000369487.3@CD58	ENST00000369487.3	protein_coding	116570903,116544311,116535965,116521787	116571039,116544604,116536228,116521983	Gene ID= ENSG00000116815.15 TPM= 1.17 Transcript Type= protein_coding
chr1	116574409	116667753	116574409	116667753	-	ENST00000369486.7@IGSF3	ENST00000369486.7	protein_coding	116667618,116666284,116616080,116613765,116607942,116603624,116599941,116588694,116584645,116579392,116574409	116667753,116666956,116616457,116614175,116608331,116604025,116600345,116589104,116585052,116579877,116577562	Gene ID= ENSG00000143061.17 TPM= 15.18 Transcript Type= protein_coding
chr1	116605283	116667757	116605283	116667757	-	transcript8205.chr1.nic@IGSF3	transcript8205.chr1.nic	protein_coding	116667618,116666284,116616080,116613765,116607942,116605283	116667757,116666956,116616457,116614175,116608331,116606551	Gene ID= ENSG00000143061.17 TPM= 2.34 Transcript Type= NA
chr1	116754385	116769228	116754385	116769228	+	ENST00000369478.3@CD2	ENST00000369478.3	protein_coding	116754385,116754631,116760402,116764484,116768464	116754553,116754951,116760632,116764606,116769228	Gene ID= ENSG00000116824.4 TPM= 7.01 Transcript Type= protein_coding
chr1	116773002	116806429	116773002	116806429	-	transcript8209.chr1.nnic@FTH1P22	transcript8209.chr1.nnic	processed_pseudogene	116805605,116782498,116776418,116773002	116806429,116782601,116776502,116775640	Gene ID= ENSG00000225079.2 TPM= 2.34 Transcript Type= NA
chr1	116910057	116990358	116910057	116990358	+	ENST00000393203.2@PTGFRN	ENST00000393203.2	protein_coding	116910057,116941715,116944679,116949192,116961243,116966911,116974216,116984680,116986801	116910252,116942083,116945092,116949572,116961668,116967330,116974323,116984985,116990358	Gene ID= ENSG00000134247.9 TPM= 32.69 Transcript Type= protein_coding
chr1	117001712	117036548	117001712	117036548	+	transcript8215.chr1.nic@CD101	transcript8215.chr1.nic	protein_coding	117001712,117009850,117011550,117013406,117017090,117018156,117021573,117025509,117033860,117036156	117001860,117010230,117011966,117013792,117017473,117018560,117021983,117025904,117034134,117036548	Gene ID= ENSG00000134256.12 TPM= 18.68 Transcript Type= NA
chr1	117001712	117036548	117001712	117036548	+	transcript8219.chr1.nnic@CD101	transcript8219.chr1.nnic	protein_coding	117001712,117009850,117011769,117013406,117017090,117018156,117021573,117025509,117033860,117036156	117001860,117010230,117011966,117013792,117017473,117018560,117021983,117025904,117034134,117036548	Gene ID= ENSG00000134256.12 TPM= 2.34 Transcript Type= NA
chr1	117060303	117107453	117060303	117107453	+	ENST00000369466.8@TTF2	ENST00000369466.8	protein_coding	117060303,117060455,117062387,117073661,117074870,117076180,117076641,117077916,117079568,117081828,117084018,117086417,117088801,117090055,117090532,117091328,117091817,117092731,117095309,117096149,117097351,117098833,117101380	117060374,117060557,117062473,117073727,117075859,117076294,117076823,117078043,117079649,117081947,117084168,117086522,117088982,117090208,117090623,117091410,117091950,117092901,117095367,117096299,117097433,117098907,117107453	Gene ID= ENSG00000116830.11 TPM= 1.17 Transcript Type= protein_coding
chr1	117366881	117402424	117366881	117402424	+	transcript8237.chr1.nic@MAN1A2	transcript8237.chr1.nic	protein_coding	117366881,117402186	117368485,117402424	Gene ID= ENSG00000198162.12 TPM= 4.67 Transcript Type= NA
chr1	117367449	117528872	117367449	117528872	+	ENST00000356554.7@MAN1A2	ENST00000356554.7	protein_coding	117367449,117402186,117405549,117414713,117420569,117442231,117460489,117466334,117493147,117496763,117499382,117502855,117522825	117368485,117402441,117405645,117414831,117420649,117442325,117460612,117466427,117493262,117496982,117499554,117502970,117528872	Gene ID= ENSG00000198162.12 TPM= 15.18 Transcript Type= protein_coding
chr1	117605934	117628372	117605934	117628372	+	ENST00000369448.3@FAM46C	ENST00000369448.3	protein_coding	117605934,117622842	117606153,117628372	Gene ID= ENSG00000183508.4 TPM= 31.53 Transcript Type= protein_coding
chr1	117863377	117866849	117863377	117866849	+	transcript8241.chr1.nnic@NA	transcript8241.chr1.nnic	NA	117863377	117866849	Gene ID= novel_gene_chr1_8242 TPM= 2.34 Transcript Type= NA
chr1	117863485	117929630	117863485	117929630	-	ENST00000369443.9@GDAP2	ENST00000369443.9	protein_coding	117929448,117920182,117918597,117912530,117911994,117906506,117899057,117896833,117887698,117886577,117883488,117881823,117878009,117863485	117929630,117920424,117918736,117912683,117912082,117906582,117899216,117896989,117887774,117886653,117883627,117881877,117878152,117870616	Gene ID= ENSG00000196505.10 TPM= 3.5 Transcript Type= protein_coding
chr1	117929759	117960060	117929759	117960060	+	transcript8246.chr1.nic@WDR3	transcript8246.chr1.nic	protein_coding	117929759,117933288,117934473,117936769,117938480,117939477,117940827,117941124,117941750,117942437,117943396,117946086,117948405,117949751,117949995,117950834,117951976,117952297,117952528,117952946,117953476,117954007,117954580,117955315,117957068,117958910,117959292	117929924,117933490,117934682,117936887,117938558,117939572,117940940,117941225,117941847,117942544,117943626,117946179,117948506,117949836,117950130,117950890,117952076,117952408,117952662,117952996,117953541,117954099,117954627,117955358,117957196,117959003,117960060	Gene ID= ENSG00000065183.15 TPM= 3.5 Transcript Type= NA
chr1	119031221	119140671	119031221	119140671	-	ENST00000235521.4@WARS2	ENST00000235521.4	protein_coding	119140555,119076350,119045582,119042264,119034095,119031221	119140671,119076607,119045662,119042349,119034213,119033359	Gene ID= ENSG00000116874.11 TPM= 4.67 Transcript Type= protein_coding
chr1	119140413	119183825	119140413	119183825	+	transcript8264.chr1.nnic@AL359915.2	transcript8264.chr1.nnic	antisense_RNA	119140413,119146953,119150565,119178644	119140793,119147069,119150746,119183825	Gene ID= ENSG00000231365.5 TPM= 3.5 Transcript Type= NA
chr1	119711715	119744226	119711715	119744226	+	ENST00000641023.1@PHGDH	ENST00000641023.1	protein_coding	119711715,119721170,119723376,119726851,119727004,119734634,119735295,119737114,119740386,119741767,119742807,119743886	119712160,119721321,119723441,119726905,119727102,119734766,119735443,119737266,119740518,119741897,119743044,119744226	Gene ID= ENSG00000092621.12 TPM= 67.72 Transcript Type= protein_coding
chr1	119711901	119744201	119711901	119744201	+	ENST00000642021.1@PHGDH	ENST00000642021.1	protein_coding	119711901,119721170,119723376,119726851,119727004,119734634,119735295,119737114,119740386,119741767,119743886	119712160,119721321,119723441,119726905,119727102,119734766,119735443,119737266,119740518,119743044,119744201	Gene ID= ENSG00000092621.12 TPM= 1.17 Transcript Type= retained_intron
chr1	119911553	120069626	119911553	120069626	-	ENST00000256646.6@NOTCH2	ENST00000256646.6	protein_coding	120069334,120029906,120005329,119996997,119986960,119969511,119968077,119967433,119966376,119965453,119963574,119959392,119955040,119953543,119950724,119949007,119948414,119941526,119940555,119937857,119937282,119935472,119928976,119926499,119925305,119923637,119922636,119922236,119921713,119920229,119919312,119918406,119917665,119911553	120069626,120029987,120005588,119997332,119987082,119969744,119968232,119967621,119966489,119965566,119963807,119959502,119955232,119953688,119950837,119949126,119948566,119941754,119940756,119938010,119937466,119935604,119929212,119926611,119925810,119923984,119922778,119922446,119921809,119920397,119919613,119918553,119917762,119916694	Gene ID= ENSG00000134250.19 TPM= 33.86 Transcript Type= protein_coding
chr1	120158027	120176540	120158027	120176540	-	transcript8286.chr1.nic@SEC22B	transcript8286.chr1.nic	protein_coding	120176307,120168840,120163210,120160384,120158027	120176540,120168949,120163370,120160530,120159402	Gene ID= ENSG00000265808.3 TPM= 2.34 Transcript Type= NA
chr1	120267334	120341871	120267334	120341871	-	ENST00000616141.4@AC244669.1	ENST00000616141.4	transcribed_unprocessed_pseudogene	120341717,120340756,120267334	120341871,120340810,120267838	Gene ID= ENSG00000223804.5 TPM= 2.34 Transcript Type= processed_transcript
chr1	120488844	120558187	120488844	120558187	-	transcript8305.chr1.nnic@AC241952.1	transcript8305.chr1.nnic	transcribed_unprocessed_pseudogene	120557019,120550145,120548973,120548641,120548289,120545281,120544267,120543947,120543017,120541892,120538571,120538323,120536311,120531878,120530296,120523894,120520234,120519218,120518530,120516824,120514825,120513766,120512470,120511666,120505711,120504382,120503600,120501928,120501110,120497182,120495030,120494234,120493158,120488844	120558187,120550276,120549092,120548733,120548501,120545439,120544380,120544084,120543196,120542086,120538735,120538404,120536402,120532089,120530384,120524126,120520669,120519410,120518649,120517352,120515060,120513817,120512693,120511818,120505962,120504513,120503719,120502117,120501234,120497421,120495146,120494460,120493301,120492073	Gene ID= ENSG00000275131.2 TPM= 5.25 Transcript Type= NA
chr1	120528387	120558499	120528387	120558499	-	transcript8307.chr1.nnic@AC241952.1	transcript8307.chr1.nnic	transcribed_unprocessed_pseudogene	120557019,120550145,120548973,120548641,120548289,120545281,120544267,120543947,120543017,120541892,120538571,120538323,120536311,120531878,120528387	120558499,120550276,120549092,120548733,120548501,120545439,120544380,120544084,120543196,120542086,120538735,120538404,120536402,120532089,120530384	Gene ID= ENSG00000275131.2 TPM= 4.09 Transcript Type= NA
chr1	120912889	120953445	120912889	120953445	+	transcript8312.chr1.nic@LINC00623	transcript8312.chr1.nic	lincRNA	120912889,120952439	120913450,120953445	Gene ID= ENSG00000226067.6 TPM= 4.67 Transcript Type= NA
chr1	120953152	120955804	120953152	120955804	+	transcript8314.chr1.nnic@NA	transcript8314.chr1.nnic	NA	120953152	120955804	Gene ID= novel_gene_chr1_8315 TPM= 2.34 Transcript Type= NA
chr1	143972642	144069793	143972642	144069793	+	transcript8323.chr1.nnic@SRGAP2D	transcript8323.chr1.nnic	unprocessed_pseudogene	143972642,143974544,144045747,144054438,144055293,144063170,144067001,144068129	143972766,143975153,144045809,144054653,144055421,144063394,144067102,144069793	Gene ID= ENSG00000270872.2 TPM= 5.25 Transcript Type= NA
chr1	144421495	144461269	144421495	144461269	-	transcript8330.chr1.nnic@NBPF15	transcript8330.chr1.nnic	protein_coding	144460843,144459366,144458847,144456537,144450772,144448775,144442670,144440141,144439829,144437945,144436895,144435781,144435111,144433773,144429811,144428606,144427818,144427047,144426278,144425517,144424690,144423870,144421495	144461269,144459483,144459036,144456805,144450802,144448916,144442920,144440295,144440038,144438047,144437109,144435853,144435316,144433824,144429863,144428657,144427990,144427098,144426450,144425568,144424862,144423975,144423256	Gene ID= ENSG00000266338.6 TPM= 2.34 Transcript Type= NA
chr1	144421495	144461681	144421495	144461681	-	transcript8332.chr1.nic@NBPF15	transcript8332.chr1.nic	protein_coding	144461381,144460843,144459366,144456537,144450772,144448775,144440141,144439829,144437945,144436895,144435781,144435111,144433773,144429700,144428606,144427818,144427047,144426278,144425517,144424690,144423870,144421495	144461681,144460961,144459483,144456805,144450802,144448916,144440295,144440038,144438047,144437109,144435853,144435316,144433824,144429863,144428657,144427990,144427098,144426450,144425568,144424862,144423975,144423256	Gene ID= ENSG00000266338.6 TPM= 2.34 Transcript Type= NA
chr1	144421495	144461681	144421495	144461681	-	transcript8335.chr1.nnic@NBPF15	transcript8335.chr1.nnic	protein_coding	144461381,144460843,144459366,144456537,144450772,144448775,144440141,144439829,144437945,144436895,144435781,144435111,144433773,144429700,144428606,144427818,144427047,144426278,144425517,144424690,144423870,144421495	144461681,144460961,144459464,144456805,144450870,144448916,144440295,144440038,144438047,144437109,144435853,144435316,144433824,144429863,144428657,144427990,144427098,144426450,144425568,144424862,144423975,144423256	Gene ID= ENSG00000266338.6 TPM= 3.5 Transcript Type= NA
chr1	144421495	144461598	144421495	144461598	-	transcript8337.chr1.nnic@NBPF15	transcript8337.chr1.nnic	protein_coding	144461381,144459366,144458847,144456537,144450772,144448857,144440141,144439829,144437945,144436895,144435781,144435111,144433773,144429700,144428606,144427818,144427047,144426278,144425517,144424690,144423870,144421495	144461598,144459483,144459036,144456805,144450870,144448916,144440295,144440038,144438047,144437109,144435853,144435316,144433824,144429863,144428657,144427990,144427098,144426450,144425568,144424862,144423975,144423256	Gene ID= ENSG00000266338.6 TPM= 2.34 Transcript Type= NA
chr1	144421495	144461656	144421495	144461656	-	transcript8346.chr1.nic@NBPF15	transcript8346.chr1.nic	protein_coding	144461381,144456537,144450772,144448775,144440141,144439829,144437945,144436895,144435781,144435111,144433773,144429700,144428606,144427818,144427047,144426278,144425517,144424690,144423870,144421495	144461656,144456805,144450870,144448916,144440295,144440038,144438047,144437109,144435853,144435316,144433824,144429863,144428657,144427990,144427098,144426450,144425568,144424862,144423975,144423256	Gene ID= ENSG00000266338.6 TPM= 2.34 Transcript Type= NA
chr1	144890826	145095346	144890826	145095346	-	transcript8350.chr1.nnic@SRGAP2B	transcript8350.chr1.nnic	protein_coding	145095223,145092835,144995008,144960338,144955439,144914692,144905859,144905091,144897116,144893408,144890826	145095346,145093443,144995200,144960398,144955601,144914754,144906074,144905219,144897337,144893509,144892381	Gene ID= ENSG00000196369.11 TPM= 10.51 Transcript Type= NA
chr1	145188346	145190414	145188346	145190414	+	transcript8360.chr1.nnic@NA	transcript8360.chr1.nnic	NA	145188346	145190414	Gene ID= novel_gene_chr1_8361 TPM= 5.84 Transcript Type= NA
chr1	145607990	145670463	145607990	145670463	+	ENST00000460277.5@GPR89A	ENST00000460277.5	protein_coding	145607990,145616234,145618320,145623054,145623593,145630687,145631664,145643869,145646184,145647175,145663329,145665562,145669625,145669834	145608175,145616293,145618423,145623160,145623714,145630807,145631744,145643978,145646272,145647267,145663424,145665651,145669690,145670463	Gene ID= ENSG00000117262.18 TPM= 11.68 Transcript Type= nonsense_mediated_decay
chr1	145746389	145824095	145746389	145824095	-	transcript8395.chr1.nnic@RNF115	transcript8395.chr1.nnic	protein_coding	145823772,145788908,145787012,145784539,145771711,145752978,145751438,145750407,145747995,145746389	145824095,145788966,145787063,145784596,145771919,145753049,145751510,145750500,145748110,145746997	Gene ID= ENSG00000265491.4 TPM= 2.34 Transcript Type= NA
chr1	145781901	145824092	145781901	145824092	-	transcript8412.chr1.nic@RNF115	transcript8412.chr1.nic	protein_coding	145823772,145788908,145781901	145824092,145788966,145784596	Gene ID= ENSG00000265491.4 TPM= 3.5 Transcript Type= NA
chr1	145742187	145745618	145742187	145745618	-	transcript8414.chr1.nnic@NA	transcript8414.chr1.nnic	NA	145742187	145745618	Gene ID= novel_gene_chr1_8415 TPM= 3.5 Transcript Type= NA
chr1	145823878	145842505	145823878	145842505	+	transcript8369.chr1.nic@POLR3C	transcript8369.chr1.nic	protein_coding	145823878,145825757,145826454,145826606,145826820,145828749,145833260,145833490,145836494,145836815,145837536,145838056,145839890,145840116,145840922,145842339	145824369,145825923,145826492,145826709,145827005,145828837,145833364,145833582,145836574,145836866,145837596,145838206,145839991,145840165,145841071,145842505	Gene ID= ENSG00000186141.8 TPM= 8.17 Transcript Type= NA
chr1	145823838	145842195	145823838	145842195	+	transcript8381.chr1.nic@POLR3C	transcript8381.chr1.nic	protein_coding	145823838,145825757,145826454,145826820,145828749,145833260,145833490,145836494,145836815,145837536,145838056,145839890,145840116,145840922	145824369,145825923,145826709,145827005,145828837,145833364,145833582,145836574,145836866,145837596,145838206,145839991,145840165,145842195	Gene ID= ENSG00000186141.8 TPM= 4.67 Transcript Type= NA
chr1	145824219	145842505	145824219	145842505	+	transcript8387.chr1.nnic@POLR3C	transcript8387.chr1.nnic	protein_coding	145824219,145825757,145826454,145826820,145828749,145833260,145833490,145836494,145838056,145839890,145840116,145840922,145842339	145824369,145825923,145826709,145827005,145828837,145833364,145833582,145836574,145838206,145839991,145840165,145841071,145842505	Gene ID= ENSG00000186141.8 TPM= 2.34 Transcript Type= NA
chr1	145824229	145842505	145824229	145842505	+	ENST00000334163.3@POLR3C	ENST00000334163.3	protein_coding	145824229,145825757,145826454,145826820,145828749,145833260,145833490,145836494,145836815,145837536,145838056,145839890,145840116,145840922,145842339	145824369,145825923,145826709,145827005,145828837,145833364,145833582,145836574,145836866,145837596,145838206,145839991,145840165,145841071,145842505	Gene ID= ENSG00000186141.8 TPM= 14.01 Transcript Type= protein_coding
chr1	145848522	145859080	145848522	145859080	-	ENST00000393045.6@PIAS3	ENST00000393045.6	protein_coding	145858967,145856589,145856347,145856068,145855736,145854746,145854458,145853813,145853504,145851020,145850771,145850453,145850232,145848522	145859080,145857006,145856431,145856118,145855826,145854880,145854563,145853886,145853664,145851153,145850939,145850586,145850269,145849712	Gene ID= ENSG00000131788.15 TPM= 12.26 Transcript Type= protein_coding
chr1	145848522	145859856	145848522	145859856	-	transcript8384.chr1.nic@PIAS3	transcript8384.chr1.nic	protein_coding	145859665,145856589,145856347,145856068,145855736,145854746,145854458,145853813,145853504,145851020,145850771,145850453,145850232,145848522	145859856,145857006,145856431,145856118,145855826,145854880,145854563,145853886,145853664,145851153,145850939,145850586,145850269,145849712	Gene ID= ENSG00000131788.15 TPM= 23.94 Transcript Type= NA
chr1	145848522	145859856	145848522	145859856	-	transcript8389.chr1.nic@PIAS3	transcript8389.chr1.nic	protein_coding	145859665,145856347,145856068,145855736,145854746,145854458,145853813,145853504,145851020,145850771,145850453,145850232,145848522	145859856,145857006,145856118,145855826,145854880,145854563,145853886,145853664,145851153,145850939,145850586,145850269,145849712	Gene ID= ENSG00000131788.15 TPM= 7.59 Transcript Type= NA
chr1	145848522	145859856	145848522	145859856	-	transcript8390.chr1.nnic@PIAS3	transcript8390.chr1.nnic	protein_coding	145859665,145856347,145856068,145855736,145854746,145854458,145853813,145853504,145851051,145850771,145850453,145850232,145848522	145859856,145857006,145856118,145855826,145854880,145854563,145853886,145853664,145851153,145850939,145850586,145850269,145849712	Gene ID= ENSG00000131788.15 TPM= 6.42 Transcript Type= NA
chr1	145866560	145885845	145866560	145885845	-	ENST00000355594.8@ANKRD35	ENST00000355594.8	protein_coding	145885720,145879258,145878391,145877968,145876816,145876569,145876140,145874822,145874155,145871982,145868311,145867991,145867287,145866560	145885845,145879388,145878479,145878032,145876873,145876639,145876246,145875006,145874192,145873985,145868400,145868056,145867392,145866765	Gene ID= ENSG00000198483.12 TPM= 9.34 Transcript Type= protein_coding
chr1	145911350	145918837	145911350	145918837	-	ENST00000369306.7@PEX11B	ENST00000369306.7	protein_coding	145918633,145917701,145916817,145911350	145918837,145917816,145917018,145912566	Gene ID= ENSG00000131779.10 TPM= 86.4 Transcript Type= protein_coding
chr1	145921556	145927536	145921556	145927536	-	ENST00000583313.6@RBM8A	ENST00000583313.6	protein_coding	145927360,145927018,145926809,145926482,145926041,145921556	145927536,145927077,145926886,145926618,145926177,145925927	Gene ID= ENSG00000265241.6 TPM= 21.02 Transcript Type= protein_coding
chr1	145933423	145958001	145933423	145958001	-	ENST00000604000.3@LIX1L	ENST00000604000.3	protein_coding	145957636,145947619,145942713,145937604,145936908,145933423	145958001,145947782,145942853,145937699,145936985,145936552	Gene ID= ENSG00000271601.3 TPM= 26.85 Transcript Type= protein_coding
chr1	145964684	145978848	145964684	145978848	+	transcript8432.chr1.nic@POLR3GL	transcript8432.chr1.nic	protein_coding	145964684,145974825,145975307,145977084,145977483,145977778,145978361	145964768,145974991,145975436,145977152,145977539,145978096,145978848	Gene ID= ENSG00000121851.12 TPM= 2.92 Transcript Type= NA
chr1	145964703	145978848	145964703	145978848	+	ENST00000369314.1@POLR3GL	ENST00000369314.1	protein_coding	145964703,145974825,145975307,145977084,145977483,145977778,145977983,145978361	145964768,145974991,145975436,145977152,145977539,145977851,145978096,145978848	Gene ID= ENSG00000121851.12 TPM= 32.11 Transcript Type= protein_coding
chr1	145992435	145996600	145992435	145996600	-	ENST00000582401.5@TXNIP	ENST00000582401.5	protein_coding	145996017,145995404,145995144,145994929,145994544,145994281,145994016,145992435	145996600,145995476,145995291,145995031,145994800,145994437,145994167,145993886	Gene ID= ENSG00000265972.5 TPM= 605.98 Transcript Type= protein_coding
chr1	145992436	145996580	145992436	145996580	-	transcript8446.chr1.nnic@NA	transcript8446.chr1.nnic	NA	145992436	145996580	Gene ID= novel_gene_chr1_8447 TPM= 10.51 Transcript Type= NA
chr1	145996911	145998172	145996911	145998172	+	transcript8448.chr1.nnic@NA	transcript8448.chr1.nnic	NA	145996911	145998172	Gene ID= novel_gene_chr1_8449 TPM= 2.34 Transcript Type= NA
chr1	147186259	147225638	147186259	147225638	-	ENST00000254090.8@FMO5	ENST00000254090.8	protein_coding	147225287,147224895,147215754,147213308,147212393,147208852,147201152,147190177,147186259	147225638,147225066,147215942,147213470,147212535,147209051,147201504,147190249,147187245	Gene ID= ENSG00000131781.12 TPM= 4.96 Transcript Type= protein_coding
chr1	147184308	147225601	147184308	147225601	-	transcript8475.chr1.nic@FMO5	transcript8475.chr1.nic	protein_coding	147224895,147215754,147213308,147212393,147208852,147201152,147190177,147184308	147225601,147215942,147213470,147212535,147209051,147201504,147190249,147187245	Gene ID= ENSG00000131781.12 TPM= 7.59 Transcript Type= NA
chr1	147184308	147225599	147184308	147225599	-	transcript8476.chr1.nic@FMO5	transcript8476.chr1.nic	protein_coding	147225287,147224895,147215754,147213308,147212393,147208852,147190177,147184308	147225599,147225066,147215942,147213470,147212535,147209051,147190249,147187245	Gene ID= ENSG00000131781.12 TPM= 2.92 Transcript Type= NA
chr1	147186261	147225305	147186261	147225305	-	transcript8480.chr1.nnic@FMO5	transcript8480.chr1.nnic	protein_coding	147224895,147215754,147213308,147212393,147201152,147190177,147186261	147225305,147215942,147213470,147212535,147201504,147190249,147187245	Gene ID= ENSG00000131781.12 TPM= 3.79 Transcript Type= NA
chr1	147203115	147225356	147203115	147225356	-	transcript8482.chr1.nnic@FMO5	transcript8482.chr1.nnic	protein_coding	147225287,147224895,147215754,147213308,147212393,147208852,147203115	147225356,147225066,147215942,147213470,147212535,147209051,147205009	Gene ID= ENSG00000131781.12 TPM= 8.76 Transcript Type= NA
chr1	147203115	147225327	147203115	147225327	-	transcript8485.chr1.nnic@FMO5	transcript8485.chr1.nnic	protein_coding	147224895,147215754,147213308,147212393,147208852,147203115	147225327,147215942,147213470,147212535,147209051,147205009	Gene ID= ENSG00000131781.12 TPM= 12.26 Transcript Type= NA
chr1	147208439	147225362	147208439	147225362	-	transcript8486.chr1.nic@FMO5	transcript8486.chr1.nic	protein_coding	147225287,147224895,147215754,147213308,147212393,147208439	147225362,147225066,147215942,147213470,147212535,147209051	Gene ID= ENSG00000131781.12 TPM= 3.5 Transcript Type= NA
chr1	147208439	147225628	147208439	147225628	-	ENST00000619062.1@FMO5	ENST00000619062.1	protein_coding	147224895,147215754,147213308,147212393,147208439	147225628,147215942,147213470,147212535,147209051	Gene ID= ENSG00000131781.12 TPM= 3.5 Transcript Type= retained_intron
chr1	147208439	147225339	147208439	147225339	-	transcript8490.chr1.nic@FMO5	transcript8490.chr1.nic	protein_coding	147224895,147213308,147212393,147208439	147225339,147215942,147212535,147209051	Gene ID= ENSG00000131781.12 TPM= 3.5 Transcript Type= NA
chr1	147186261	147225309	147186261	147225309	-	ENST00000369272.7@FMO5	ENST00000369272.7	protein_coding	147224895,147215754,147213308,147212393,147208852,147190177,147186261	147225309,147215942,147213470,147212535,147209051,147190249,147187245	Gene ID= ENSG00000131781.12 TPM= 2.63 Transcript Type= protein_coding
chr1	147214782	147225339	147214782	147225339	-	ENST00000478432.1@FMO5	ENST00000478432.1	protein_coding	147224895,147214782	147225339,147215942	Gene ID= ENSG00000131781.12 TPM= 1.17 Transcript Type= processed_transcript
chr1	147202167	147208490	147202167	147208490	+	transcript8499.chr1.nnic@NA	transcript8499.chr1.nnic	NA	147202167	147208490	Gene ID= novel_gene_chr1_8500 TPM= 3.5 Transcript Type= NA
chr1	147242682	147295762	147242682	147295762	+	transcript8510.chr1.nnic@CHD1L	transcript8510.chr1.nnic	protein_coding	147242682,147264422,147265932,147267426,147268782,147270932,147272171,147275354,147276104,147280026,147284351,147285324,147286298,147287635,147291482,147293608,147294409,147295431	147242830,147264584,147266087,147267518,147268878,147271005,147272281,147275468,147276257,147280191,147284499,147285487,147286500,147287733,147291552,147293722,147294517,147295762	Gene ID= ENSG00000131778.18 TPM= 3.5 Transcript Type= NA
chr1	147242684	147295762	147242684	147295762	+	ENST00000369258.8@CHD1L	ENST00000369258.8	protein_coding	147242684,147252623,147254870,147255813,147256531,147259837,147264422,147265932,147267426,147268782,147270932,147272171,147275354,147276104,147280026,147284351,147285324,147286298,147287635,147291482,147293608,147294409,147295431	147242830,147252735,147254976,147255927,147256562,147259918,147264584,147266087,147267518,147268878,147271005,147272281,147275468,147276257,147280191,147284499,147285487,147286500,147287733,147291552,147293722,147294517,147295762	Gene ID= ENSG00000131778.18 TPM= 75.89 Transcript Type= protein_coding
chr1	147614398	147616572	147614398	147616572	-	transcript8517.chr1.nnic@NA	transcript8517.chr1.nnic	NA	147614398	147616572	Gene ID= novel_gene_chr1_8518 TPM= 2.34 Transcript Type= NA
chr1	147642235	147670496	147642235	147670496	-	ENST00000583509.6@ACP6	ENST00000583509.6	protein_coding	147669830,147659647,147659396,147658960,147655161,147654194,147652449,147650143,147648246,147642235	147670496,147659775,147659526,147659039,147655248,147654326,147652549,147650238,147648411,147647566	Gene ID= ENSG00000162836.11 TPM= 8.17 Transcript Type= protein_coding
chr1	147647368	147670482	147647368	147670482	-	transcript8521.chr1.nic@ACP6	transcript8521.chr1.nic	protein_coding	147669830,147659647,147659396,147658960,147655161,147654194,147650143,147648246,147647368	147670482,147659775,147659526,147659039,147655248,147654326,147652647,147648411,147647566	Gene ID= ENSG00000162836.11 TPM= 2.34 Transcript Type= NA
chr1	147756201	147781127	147756201	147781127	-	transcript8529.chr1.nnic@GJA5	transcript8529.chr1.nnic	protein_coding	147780667,147756201	147781127,147759271	Gene ID= ENSG00000265107.2 TPM= 19.07 Transcript Type= NA
chr1	147757098	147781052	147757098	147781052	-	transcript8531.chr1.nnic@GJA5	transcript8531.chr1.nnic	protein_coding	147780667,147757098	147781052,147759271	Gene ID= ENSG00000265107.2 TPM= 2.72 Transcript Type= NA
chr1	147756199	147760606	147756199	147760606	-	ENST00000579774.2@GJA5	ENST00000579774.2	protein_coding	147760499,147756199	147760606,147759271	Gene ID= ENSG00000265107.2 TPM= 15.56 Transcript Type= protein_coding
chr1	147768228	147772803	147768228	147772803	+	transcript8532.chr1.nnic@NA	transcript8532.chr1.nnic	NA	147768228	147772803	Gene ID= novel_gene_chr1_8533 TPM= 17.51 Transcript Type= NA
chr1	147928388	147993339	147928388	147993339	+	transcript8538.chr1.nic@GPR89B	transcript8538.chr1.nic	protein_coding	147928388,147936627,147938714,147943438,147943997,147953345,147954322,147966554,147969867,147986199,147988432,147992502,147992711	147928578,147936686,147938817,147943544,147944098,147953465,147954402,147968963,147969959,147986294,147988521,147992567,147993339	Gene ID= ENSG00000188092.14 TPM= 2.34 Transcript Type= NA
chr1	147928393	147993339	147928393	147993339	+	ENST00000314163.11@GPR89B	ENST00000314163.11	protein_coding	147928393,147936627,147938714,147943438,147943997,147953345,147954322,147966554,147968875,147969867,147986199,147988432,147992502,147992711	147928578,147936686,147938817,147943544,147944098,147953465,147954402,147966663,147968963,147969959,147986294,147988521,147992567,147993339	Gene ID= ENSG00000188092.14 TPM= 9.34 Transcript Type= protein_coding
chr1	148102151	148152320	148102151	148152320	-	transcript8542.chr1.nnic@NBPF11	transcript8542.chr1.nnic	protein_coding	148151720,148143415,148126829,148123853,148122729,148122055,148120501,148118620,148117572,148116463,148115793,148114437,148110378,148109284,148108482,148107711,148106942,148106181,148105360,148104537,148102151	148152320,148143686,148127038,148124067,148122801,148122266,148120710,148118722,148117786,148116535,148115998,148114488,148110541,148109335,148108654,148107762,148107114,148106232,148105528,148104645,148103912	Gene ID= ENSG00000263956.6 TPM= 4.67 Transcript Type= NA
chr1	148132739	148152320	148132739	148152320	-	transcript8543.chr1.nnic@NBPF11	transcript8543.chr1.nnic	protein_coding	148151720,148143415,148140512,148137711,148132739	148152320,148143686,148140564,148137809,148135813	Gene ID= ENSG00000263956.6 TPM= 4.67 Transcript Type= NA
chr1	148844421	148981746	148844421	148981746	+	transcript8556.chr1.nic@PDE4DIP	transcript8556.chr1.nic	protein_coding	148844421,148863250,148868471,148889784,148929197,148931800,148932113,148937747,148960654,148961837,148962196,148962428,148965484,148966543,148966839,148967726,148968836,148972180,148972511,148974514,148977937,148978278,148979737,148981270	148844794,148863305,148868622,148889894,148929273,148931923,148932288,148937864,148960785,148961956,148962288,148962640,148965642,148966656,148966976,148967905,148969030,148972344,148972592,148974605,148978053,148978415,148979849,148981746	Gene ID= ENSG00000178104.19 TPM= 22.18 Transcript Type= NA
chr1	148951937	148981746	148951937	148981746	+	ENST00000479408.6@PDE4DIP	ENST00000479408.6	protein_coding	148951937,148960654,148961837,148962196,148962428,148965484,148966543,148966839,148967726,148968836,148972180,148972511,148974514,148977937,148978278,148979737,148981270	148952154,148960785,148961956,148962288,148962640,148965642,148966656,148966976,148967905,148969030,148972344,148972592,148974605,148978053,148978415,148979849,148981746	Gene ID= ENSG00000178104.19 TPM= 2.34 Transcript Type= protein_coding
chr1	149054138	149103597	149054138	149103597	-	transcript8569.chr1.nnic@NBPF9	transcript8569.chr1.nnic	protein_coding	149103271,149102729,149101262,149100741,149098438,149090753,149082272,149081965,149080053,149079007,149077883,149077208,149075655,149073768,149072718,149071604,149070934,149069594,149065526,149064431,149063633,149062862,149062093,149061332,149060523,149056512,149054138	149103597,149102847,149101379,149100930,149098706,149090894,149082430,149082174,149080155,149079221,149077955,149077419,149075864,149073870,149072932,149071676,149071139,149069645,149065689,149064482,149063805,149062913,149062265,149061383,149060695,149056620,149055899	Gene ID= ENSG00000269713.7 TPM= 12.84 Transcript Type= NA
chr1	149091356	149103538	149091356	149103538	-	transcript8582.chr1.nnic@NBPF9	transcript8582.chr1.nnic	protein_coding	149103271,149102729,149101262,149100741,149098438,149091356	149103538,149102847,149101384,149100930,149098706,149094132	Gene ID= ENSG00000269713.7 TPM= 7.59 Transcript Type= NA
chr1	149187067	149285827	149187067	149285827	-	transcript8590.chr1.nnic@AC245297.1	transcript8590.chr1.nnic	unprocessed_pseudogene	149285454,149266969,149261640,149240377,149201014,149198361,149197996,149187067	149285827,149267024,149261791,149240487,149201090,149198484,149198171,149190531	Gene ID= ENSG00000215861.5 TPM= 3.5 Transcript Type= NA
chr1	149187177	149285827	149187177	149285827	-	transcript8591.chr1.nnic@AC245297.1	transcript8591.chr1.nnic	unprocessed_pseudogene	149285454,149266969,149261640,149240377,149201014,149198361,149197996,149187177	149285827,149267024,149261791,149240487,149201090,149198484,149198171,149188789	Gene ID= ENSG00000215861.5 TPM= 2.34 Transcript Type= NA
chr1	149197559	149285827	149197559	149285827	-	transcript8595.chr1.nnic@AC245297.1	transcript8595.chr1.nnic	unprocessed_pseudogene	149285454,149266969,149261640,149240377,149201014,149198361,149197559	149285827,149267024,149261791,149240487,149201090,149198484,149198171	Gene ID= ENSG00000215861.5 TPM= 8.17 Transcript Type= NA
chr1	149646750	149647619	149646750	149647619	+	ENST00000610297.1@LINC00869	ENST00000610297.1	lincRNA	149646750,149647381	149647064,149647619	Gene ID= ENSG00000277147.4 TPM= 1.17 Transcript Type= lincRNA
chr1	149884459	149886652	149884459	149886652	-	ENST00000369155.3@HIST2H2BE	ENST00000369155.3	protein_coding	149884459	149886652	Gene ID= ENSG00000184678.10 TPM= 3.5 Transcript Type= protein_coding
chr1	149899597	149900792	149899597	149900792	+	ENST00000369152.5@BOLA1	ENST00000369152.5	protein_coding	149899597,149900010	149899672,149900792	Gene ID= ENSG00000178096.8 TPM= 11.09 Transcript Type= protein_coding
chr1	149899606	149900798	149899606	149900798	+	ENST00000476344.1@BOLA1	ENST00000476344.1	protein_coding	149899606,149900123	149899672,149900798	Gene ID= ENSG00000178096.8 TPM= 2.92 Transcript Type= processed_transcript
chr1	149903318	149917882	149903318	149917882	-	ENST00000369146.7@SV2A	ENST00000369146.7	protein_coding	149917739,149913219,149911800,149910826,149910570,149909801,149909461,149909192,149908042,149907700,149906650,149905880,149903318	149917882,149914187,149911980,149910977,149910703,149909890,149909571,149909280,149908206,149907833,149906856,149906039,149905197	Gene ID= ENSG00000159164.9 TPM= 3.5 Transcript Type= protein_coding
chr1	149928651	149931599	149928651	149931599	-	transcript8621.chr1.nic@MTMR11	transcript8621.chr1.nic	protein_coding	149931260,149930792,149930365,149929623,149928651	149931599,149930965,149930547,149929916,149929317	Gene ID= ENSG00000014914.20 TPM= 8.17 Transcript Type= NA
chr1	149928652	149936867	149928652	149936867	-	ENST00000439741.3@MTMR11	ENST00000439741.3	protein_coding	149936582,149936154,149935584,149935299,149934986,149934448,149934191,149933855,149933610,149933406,149932264,149931944,149931260,149930792,149930365,149929623,149928652	149936867,149936229,149935705,149935359,149935128,149934526,149934326,149933942,149933698,149933530,149932330,149932014,149931426,149930965,149930547,149929916,149929317	Gene ID= ENSG00000014914.20 TPM= 9.34 Transcript Type= protein_coding
chr1	149941261	149944417	149941261	149944417	-	transcript8629.chr1.nnic@NA	transcript8629.chr1.nnic	NA	149941261	149944417	Gene ID= novel_gene_chr1_8630 TPM= 2.34 Transcript Type= NA
chr1	150067312	150145327	150067312	150145327	+	ENST00000369130.7@VPS45	ENST00000369130.7	protein_coding	150067312,150068630,150072166,150076233,150076916,150077094,150077669,150081342,150081884,150082716,150091937,150092302,150093527,150110496,150144709	150067950,150068764,150072226,150076312,150076984,150077231,150077779,150081476,150081997,150082883,150092095,150092409,150093648,150110627,150145327	Gene ID= ENSG00000136631.12 TPM= 31.53 Transcript Type= protein_coding
chr1	150150124	150159628	150150124	150159628	+	transcript8640.chr1.nnic@PLEKHO1	transcript8640.chr1.nnic	protein_coding	150150124,150150217,150150912,150156066,150156911,150157385,150158819	150150130,150150287,150151058,150156206,150157015,150157486,150159628	Gene ID= ENSG00000023902.13 TPM= 3.5 Transcript Type= NA
chr1	150149842	150159628	150149842	150159628	+	transcript8643.chr1.nnic@PLEKHO1	transcript8643.chr1.nnic	protein_coding	150149842,150150912,150156066,150156859,150157385,150158819	150150287,150151058,150156206,150157015,150157486,150159628	Gene ID= ENSG00000023902.13 TPM= 5.84 Transcript Type= NA
chr1	150149980	150160065	150149980	150160065	+	ENST00000369124.4@PLEKHO1	ENST00000369124.4	protein_coding	150149980,150150912,150156066,150156911,150157385,150158819	150150287,150151058,150156206,150157015,150157486,150160065	Gene ID= ENSG00000023902.13 TPM= 5.84 Transcript Type= protein_coding
chr1	150218417	150236156	150218417	150236156	-	ENST00000583931.5@ANP32E	ENST00000583931.5	protein_coding	150235733,150231777,150230571,150229072,150226608,150223186,150218417	150236156,150231926,150230693,150229237,150226795,150223240,150220761	Gene ID= ENSG00000143401.14 TPM= 26.85 Transcript Type= protein_coding
chr1	150263917	150266899	150263917	150266899	-	transcript8672.chr1.nnic@NA	transcript8672.chr1.nnic	NA	150263917	150266899	Gene ID= novel_gene_chr1_8673 TPM= 2.34 Transcript Type= NA
chr1	150265406	150269303	150265406	150269303	-	ENST00000360244.8@APH1A	ENST00000360244.8	protein_coding	150268698,150267957,150267716,150267356,150267075,150265406	150269303,150268127,150267789,150267478,150267202,150266656	Gene ID= ENSG00000117362.12 TPM= 50.21 Transcript Type= protein_coding
chr1	150265404	150268999	150265404	150268999	-	ENST00000369109.7@APH1A	ENST00000369109.7	protein_coding	150268698,150267957,150267716,150267356,150267075,150266533,150265404	150268999,150268127,150267789,150267478,150267202,150266656,150266194	Gene ID= ENSG00000117362.12 TPM= 33.86 Transcript Type= protein_coding
chr1	150266247	150269022	150266247	150269022	+	transcript8670.chr1.nnic@NA	transcript8670.chr1.nnic	NA	150266247	150269022	Gene ID= novel_gene_chr1_8671 TPM= 2.34 Transcript Type= NA
chr1	150268200	150280916	150268200	150280916	+	ENST00000369102.5@C1orf54	ENST00000369102.5	protein_coding	150268200,150272284,150272799,150274087,150275741,150276522,150279643,150280835	150268820,150272413,150272863,150274170,150275799,150276632,150279741,150280916	Gene ID= ENSG00000118292.8 TPM= 1.17 Transcript Type= protein_coding
chr1	150272699	150280916	150272699	150280916	+	ENST00000369099.7@C1orf54	ENST00000369099.7	protein_coding	150272699,150274087,150275741,150276522,150279643,150280835	150272863,150274170,150275799,150276632,150279741,150280916	Gene ID= ENSG00000118292.8 TPM= 2.34 Transcript Type= protein_coding
chr1	150282543	150287093	150282543	150287093	+	ENST00000369094.5@CIART	ENST00000369094.5	protein_coding	150282543,150283462,150283805,150284426,150284597,150286430	150282618,150283633,150283880,150284504,150284708,150287093	Gene ID= ENSG00000159208.15 TPM= 5.84 Transcript Type= protein_coding
chr1	150282819	150287093	150282819	150287093	+	ENST00000290363.5@CIART	ENST00000290363.5	protein_coding	150282819,150283805,150284426,150284597,150286430	150283633,150283880,150284504,150284708,150287093	Gene ID= ENSG00000159208.15 TPM= 2.34 Transcript Type= protein_coding
chr1	150293720	150308979	150293720	150308979	+	ENST00000614145.4@MRPS21	ENST00000614145.4	protein_coding	150293720,150294335,150308048	150293898,150294449,150308979	Gene ID= ENSG00000266472.5 TPM= 28.02 Transcript Type= protein_coding
chr1	150293920	150308979	150293920	150308979	+	ENST00000581066.2@MRPS21	ENST00000581066.2	protein_coding	150293920,150308048	150294449,150308979	Gene ID= ENSG00000266472.5 TPM= 2.34 Transcript Type= protein_coding
chr1	150321475	150353195	150321475	150353195	+	transcript8687.chr1.nic@PRPF3	transcript8687.chr1.nic	protein_coding	150321475,150324895,150325751,150327557,150328320,150332684,150332979,150334935,150338160,150340398,150343309,150344162,150344434,150346018,150346408,150349157,150352833	150321592,150325087,150325881,150327652,150328466,150332767,150333199,150335241,150338326,150340477,150343452,150344261,150344547,150346136,150346491,150349218,150353195	Gene ID= ENSG00000117360.12 TPM= 8.17 Transcript Type= NA
chr1	150321476	150353195	150321476	150353195	+	ENST00000324862.6@PRPF3	ENST00000324862.6	protein_coding	150321476,150324895,150325751,150328320,150332684,150332979,150334935,150338160,150340398,150343309,150344162,150344434,150346018,150346408,150349157,150352833	150321592,150325087,150325881,150328466,150332767,150333199,150335241,150338326,150340477,150343452,150344261,150344547,150346136,150346491,150349218,150353195	Gene ID= ENSG00000117360.12 TPM= 29.19 Transcript Type= protein_coding
chr1	150364711	150473704	150364711	150473704	+	transcript8698.chr1.nnic@RPRD2	transcript8698.chr1.nnic	protein_coding	150364711,150417596,150440923,150441881,150443231,150444251,150446226,150457288,150460060,150464527,150470561,150471883	150364919,150417725,150441023,150441958,150443283,150444377,150446401,150457570,150460317,150464727,150470980,150473704	Gene ID= ENSG00000163125.15 TPM= 2.34 Transcript Type= NA
chr1	150364711	150473556	150364711	150473556	+	ENST00000369068.4@RPRD2	ENST00000369068.4	protein_coding	150364711,150417596,150440923,150441881,150443231,150444251,150446226,150457288,150460060,150464527,150470561	150364919,150417725,150441023,150441958,150443283,150444377,150446401,150457570,150460317,150464727,150473556	Gene ID= ENSG00000163125.15 TPM= 4.67 Transcript Type= protein_coding
chr1	150487417	150507602	150487417	150507602	+	ENST00000369064.7@TARS2	ENST00000369064.7	protein_coding	150487417,150487858,150488964,150490601,150491394,150491598,150492411,150496482,150496810,150497530,150498502,150498897,150499216,150504335,150504632,150504906,150505591,150506916	150487516,150488054,150489087,150490725,150491511,150491662,150492489,150496628,150496908,150497747,150498664,150499034,150499293,150504435,150504733,150504978,150505705,150507602	Gene ID= ENSG00000143374.16 TPM= 28.02 Transcript Type= protein_coding
chr1	150508085	150513789	150508085	150513789	+	ENST00000369047.8@ECM1	ENST00000369047.8	protein_coding	150508085,150509531,150509661,150509922,150510102,150510876,150511457,150512352,150512725,150513237	150508279,150509581,150509762,150510002,150510182,150511198,150511831,150512572,150512812,150513789	Gene ID= ENSG00000143369.14 TPM= 4.67 Transcript Type= protein_coding
chr1	150553999	150560932	150553999	150560932	+	transcript8719.chr1.nic@ADAMTSL4	transcript8719.chr1.nic	protein_coding	150553999,150555429,150556162,150556621,150556939,150557150,150557494,150557945,150558473,150558962,150559287,150559761,150560060	150554467,150555565,150556366,150556793,150557050,150557335,150557623,150558149,150558649,150559165,150559466,150559905,150560932	Gene ID= ENSG00000143382.14 TPM= 54.88 Transcript Type= NA
chr1	150574556	150579590	150574556	150579590	-	ENST00000369026.2@MCL1	ENST00000369026.2	protein_coding	150578843,150578244,150574556	150579590,150578491,150577491	Gene ID= ENSG00000143384.12 TPM= 510.82 Transcript Type= protein_coding
chr1	150621251	150629596	150621251	150629596	-	ENST00000369014.9@ENSA	ENST00000369014.9	protein_coding	150629414,150627467,150625642,150621251	150629596,150627592,150625808,150622859	Gene ID= ENSG00000143420.18 TPM= 4.09 Transcript Type= protein_coding
chr1	150623281	150629577	150623281	150629577	-	ENST00000271690.12@ENSA	ENST00000271690.12	protein_coding	150629414,150627467,150623281	150629577,150627592,150625808	Gene ID= ENSG00000143420.18 TPM= 11.09 Transcript Type= protein_coding
chr1	150646225	150697024	150646225	150697024	-	ENST00000271732.7@GOLPH3L	ENST00000271732.7	protein_coding	150696992,150694656,150663632,150661814,150646225	150697024,150694850,150663763,150661928,150648748	Gene ID= ENSG00000143457.10 TPM= 3.5 Transcript Type= protein_coding
chr1	150730196	150765957	150730196	150765957	-	ENST00000368985.7@CTSS	ENST00000368985.7	protein_coding	150765698,150764638,150757858,150755001,150751781,150750006,150747777,150730196	150765957,150764764,150757980,150755150,150752008,150750171,150747879,150733145	Gene ID= ENSG00000163131.10 TPM= 171.05 Transcript Type= protein_coding
chr1	150796208	150808323	150796208	150808323	-	ENST00000271651.7@CTSK	ENST00000271651.7	protein_coding	150808214,150806686,150806102,150805861,150804021,150799544,150799168,150796208	150808323,150806806,150806224,150806016,150804239,150799709,150799273,150796898	Gene ID= ENSG00000143387.12 TPM= 53.71 Transcript Type= protein_coding
chr1	150809705	150876768	150809705	150876768	-	ENST00000358595.9@ARNT	ENST00000358595.9	protein_coding	150876543,150858349,150852762,150846263,150842424,150839441,150836280,150834538,150832334,150831818,150829904,150829093,150826543,150823194,150817920,150817361,150817082,150816788,150816259,150814077,150813172,150809705	150876768,150858460,150852806,150846307,150842468,150839654,150836493,150834640,150832399,150831903,150829980,150829227,150826617,150823345,150818030,150817433,150817202,150816890,150816406,150814239,150813338,150812110	Gene ID= ENSG00000143437.20 TPM= 15.18 Transcript Type= protein_coding
chr1	150811961	150876609	150811961	150876609	-	ENST00000505755.5@ARNT	ENST00000505755.5	protein_coding	150876543,150858349,150852762,150846263,150839441,150836280,150834538,150832334,150831818,150829904,150829093,150826543,150823194,150817920,150817361,150817082,150816788,150816259,150814077,150813172,150811961	150876609,150858460,150852806,150846307,150839654,150836493,150834640,150832399,150831903,150829980,150829227,150826617,150823345,150818030,150817433,150817202,150816890,150816406,150814239,150813338,150812110	Gene ID= ENSG00000143437.20 TPM= 2.34 Transcript Type= protein_coding
chr1	150926339	150964735	150926339	150964735	+	ENST00000271640.9@SETDB1	ENST00000271640.9	protein_coding	150926339,150927704,150929967,150939940,150941329,150942563,150942852,150943920,150944918,150946886,150949122,150949370,150950458,150951365,150959178,150960563,150962130,150962587,150962974,150963530,150963995,150964247	150926517,150927974,150930118,150939974,150941428,150942688,150943053,150943993,150945108,150947012,150949278,150949525,150951090,150951481,150959347,150961191,150962158,150962719,150963139,150963741,150964083,150964735	Gene ID= ENSG00000143379.12 TPM= 14.01 Transcript Type= protein_coding
chr1	150926305	150945320	150926305	150945320	+	transcript8800.chr1.nic@SETDB1	transcript8800.chr1.nic	protein_coding	150926305,150927704,150929967,150939940,150941329,150942563,150942852,150943920,150944918	150926348,150927974,150930118,150939974,150941428,150942688,150943053,150943993,150945320	Gene ID= ENSG00000143379.12 TPM= 2.63 Transcript Type= NA
chr1	150926414	150945320	150926414	150945320	+	transcript8801.chr1.nic@SETDB1	transcript8801.chr1.nic	protein_coding	150926414,150927704,150929967,150939940,150941329,150942563,150942852,150943920,150944918	150926517,150927974,150930118,150939974,150941428,150942688,150943053,150943993,150945320	Gene ID= ENSG00000143379.12 TPM= 3.79 Transcript Type= NA
chr1	150926423	150945320	150926423	150945320	+	transcript8802.chr1.nnic@SETDB1	transcript8802.chr1.nnic	protein_coding	150926423,150927704,150929967,150939940,150941329,150942563,150942852,150943920,150944918	150926563,150927974,150930118,150939974,150941428,150942688,150943053,150943993,150945320	Gene ID= ENSG00000143379.12 TPM= 2.63 Transcript Type= NA
chr1	150926349	150945320	150926349	150945320	+	ENST00000368962.6@SETDB1	ENST00000368962.6	protein_coding	150926349,150927704,150929967,150939940,150941329,150942563,150942852,150943920,150944918	150926463,150927974,150930118,150939974,150941428,150942688,150943053,150943993,150945320	Gene ID= ENSG00000143379.12 TPM= 1.46 Transcript Type= protein_coding
chr1	150965173	150975004	150965173	150975004	-	ENST00000368954.9@CERS2	ENST00000368954.9	protein_coding	150974619,150968918,150968395,150968083,150967820,150967664,150967392,150967074,150966756,150966476,150965173	150975004,150969091,150968512,150968201,150967877,150967714,150967484,150967202,150966862,150966629,150966288	Gene ID= ENSG00000143418.19 TPM= 193.35 Transcript Type= protein_coding
chr1	150965173	150975003	150965173	150975003	-	ENST00000271688.10@CERS2	ENST00000271688.10	protein_coding	150974619,150968918,150968395,150968083,150967820,150967664,150967392,150967074,150966756,150966476,150965173	150975003,150969131,150968512,150968201,150967877,150967714,150967484,150967202,150966862,150966629,150966288	Gene ID= ENSG00000143418.19 TPM= 17.05 Transcript Type= protein_coding
chr1	150973123	150975534	150973123	150975534	+	ENST00000412838.1@AL590133.1	ENST00000412838.1	antisense_RNA	150973123,150973905,150975313	150973169,150974003,150975534	Gene ID= ENSG00000231073.1 TPM= 1.17 Transcript Type= antisense_RNA
chr1	150996835	151006902	150996835	151006902	-	transcript8843.chr1.nic@MINDY1	transcript8843.chr1.nic	protein_coding	151006312,151002165,151001725,151001250,151000457,150999862,150999369,150998082,150997624,150996835	151006902,151002968,151001782,151001314,151000615,150999964,150999511,150998273,150997779,150997367	Gene ID= ENSG00000143409.15 TPM= 7.01 Transcript Type= NA
chr1	151008417	151035713	151008417	151035713	+	transcript8850.chr1.nic@PRUNE1	transcript8850.chr1.nic	protein_coding	151008417,151017812,151018557,151024611,151025515,151027233,151028786,151033806	151008671,151017904,151018669,151024795,151025673,151027327,151028944,151035713	Gene ID= ENSG00000143363.15 TPM= 5.45 Transcript Type= NA
chr1	151008483	151035713	151008483	151035713	+	ENST00000368936.5@PRUNE1	ENST00000368936.5	protein_coding	151008483,151017812,151024611,151025515,151027233,151028786,151033806	151008671,151017904,151024795,151025673,151027327,151028944,151035713	Gene ID= ENSG00000143363.15 TPM= 8.96 Transcript Type= protein_coding
chr1	151008477	151035713	151008477	151035713	+	ENST00000271620.7@PRUNE1	ENST00000271620.7	protein_coding	151008477,151017812,151018467,151024611,151025515,151027233,151028786,151033806	151008671,151017904,151018669,151024795,151025673,151027327,151028944,151035713	Gene ID= ENSG00000143363.15 TPM= 4.29 Transcript Type= protein_coding
chr1	151047707	151050251	151047707	151050251	+	transcript8876.chr1.nnic@NA	transcript8876.chr1.nnic	NA	151047707	151050251	Gene ID= novel_gene_chr1_8877 TPM= 4.67 Transcript Type= NA
chr1	151050971	151070325	151050971	151070325	-	ENST00000439374.6@CDC42SE1	ENST00000439374.6	protein_coding	151070264,151068319,151067132,151059479,151055677,151055016,151054231,151050971	151070325,151068380,151067334,151059773,151055993,151055126,151054321,151053327	Gene ID= ENSG00000197622.12 TPM= 59.16 Transcript Type= protein_coding
chr1	151050973	151059680	151050973	151059680	-	transcript8870.chr1.nic@CDC42SE1	transcript8870.chr1.nic	protein_coding	151059479,151054231,151050973	151059680,151055993,151053327	Gene ID= ENSG00000197622.12 TPM= 18.3 Transcript Type= NA
chr1	151050973	151059649	151050973	151059649	-	ENST00000357235.5@CDC42SE1	ENST00000357235.5	protein_coding	151059479,151055677,151055016,151054231,151050973	151059649,151055993,151055126,151054321,151053327	Gene ID= ENSG00000197622.12 TPM= 48.65 Transcript Type= protein_coding
chr1	151057758	151068497	151057758	151068497	+	ENST00000368921.4@MLLT11	ENST00000368921.4	protein_coding	151057758,151067219	151060553,151068497	Gene ID= ENSG00000213190.3 TPM= 2.34 Transcript Type= protein_coding
chr1	151070604	151125542	151070604	151125542	+	ENST00000368918.7@GABPB2	ENST00000368918.7	protein_coding	151070604,151088190,151090406,151093192,151097852,151103562,151107037,151117392,151117957	151070934,151088297,151090573,151093386,151098002,151103675,151107222,151117516,151125542	Gene ID= ENSG00000143458.11 TPM= 1.17 Transcript Type= protein_coding
chr1	151132055	151133525	151132055	151133525	-	transcript8881.chr1.nnic@NA	transcript8881.chr1.nnic	NA	151132055	151133525	Gene ID= novel_gene_chr1_8882 TPM= 4.67 Transcript Type= NA
chr1	151156629	151159749	151156629	151159749	+	ENST00000368910.3@TNFAIP8L2	ENST00000368910.3	protein_coding	151156629,151158666	151156722,151159749	Gene ID= ENSG00000163154.5 TPM= 15.18 Transcript Type= protein_coding
chr1	151156664	151169133	151156664	151169133	+	ENST00000602841.5@SCNM1	ENST00000602841.5	protein_coding	151156664,151166471,151166934,151167121,151167326,151168144,151168986	151156722,151166541,151167022,151167218,151167414,151168338,151169133	Gene ID= ENSG00000163156.11 TPM= 2.34 Transcript Type= protein_coding
chr1	151166079	151169138	151166079	151169138	+	ENST00000368902.1@SCNM1	ENST00000368902.1	protein_coding	151166079,151166471,151166934,151167121,151167326,151168144,151168986	151166252,151166541,151167022,151167218,151167414,151168338,151169138	Gene ID= ENSG00000163156.11 TPM= 3.5 Transcript Type= protein_coding
chr1	151156916	151160253	151156916	151160253	+	transcript8889.chr1.nnic@NA	transcript8889.chr1.nnic	NA	151156916	151160253	Gene ID= novel_gene_chr1_8890 TPM= 9.92 Transcript Type= NA
chr1	151159748	151165919	151159748	151165919	-	ENST00000368908.9@LYSMD1	ENST00000368908.9	protein_coding	151165079,151161736,151159748	151165919,151162100,151161020	Gene ID= ENSG00000163155.11 TPM= 1.75 Transcript Type= protein_coding
chr1	151176304	151190213	151176304	151190213	-	ENST00000368892.8@VPS72	ENST00000368892.8	protein_coding	151190005,151185798,151185506,151184317,151178001,151176304	151190213,151185950,151185620,151184493,151178145,151177031	Gene ID= ENSG00000163159.12 TPM= 32.69 Transcript Type= protein_coding
chr1	151176462	151190158	151176462	151190158	-	ENST00000354473.4@VPS72	ENST00000354473.4	protein_coding	151190005,151185798,151185506,151184317,151178001,151176462	151190158,151185950,151185620,151184493,151178145,151177064	Gene ID= ENSG00000163159.12 TPM= 4.67 Transcript Type= protein_coding
chr1	151198551	151249536	151198551	151249536	+	ENST00000349792.9@PIP5K1A	ENST00000349792.9	protein_coding	151198551,151224248,151227320,151231671,151232248,151232551,151234197,151236558,151238182,151239130,151239955,151242123,151242438,151246920,151247863	151199081,151224279,151227400,151231801,151232365,151232703,151234496,151236763,151238265,151239178,151240039,151242269,151242567,151246965,151249536	Gene ID= ENSG00000143398.19 TPM= 40.87 Transcript Type= protein_coding
chr1	151198552	151249504	151198552	151249504	+	ENST00000409426.5@PIP5K1A	ENST00000409426.5	protein_coding	151198552,151224245,151227320,151231671,151232248,151232551,151234197,151236558,151238182,151239130,151239955,151242123,151242438,151246920,151247863	151199081,151224279,151227400,151231801,151232365,151232703,151234496,151236763,151238265,151239178,151240039,151242269,151242567,151246965,151249504	Gene ID= ENSG00000143398.19 TPM= 9.34 Transcript Type= protein_coding
chr1	151254703	151267479	151254703	151267479	+	ENST00000368884.7@PSMD4	ENST00000368884.7	protein_coding	151254703,151262161,151263914,151264832,151265166,151265394,151266004,151266308,151266520,151267173	151254808,151262301,151264028,151264918,151265234,151265609,151266112,151266439,151266587,151267479	Gene ID= ENSG00000159352.15 TPM= 159.38 Transcript Type= protein_coding
chr1	151254709	151267459	151254709	151267459	+	ENST00000368881.8@PSMD4	ENST00000368881.8	protein_coding	151254709,151262161,151263914,151264832,151265166,151265394,151266004,151266308,151266520,151267173	151254808,151262301,151264028,151264918,151265234,151265609,151266121,151266439,151266587,151267459	Gene ID= ENSG00000159352.15 TPM= 8.17 Transcript Type= protein_coding
chr1	151289322	151291903	151289322	151291903	+	transcript8937.chr1.nic@ZNF687	transcript8937.chr1.nic	protein_coding	151289322,151289678,151290122,151290432,151290715	151289540,151290007,151290234,151290573,151291903	Gene ID= ENSG00000143373.17 TPM= 10.51 Transcript Type= NA
chr1	151291797	151327436	151291797	151327436	-	transcript8923.chr1.nic@PI4KB	transcript8923.chr1.nic	protein_coding	151327271,151326172,151315573,151307574,151306136,151303541,151302194,151301844,151298808,151294409,151294018,151291797	151327436,151326373,151316509,151307801,151306363,151303650,151302298,151301967,151299073,151294541,151294138,151293033	Gene ID= ENSG00000143393.16 TPM= 8.99 Transcript Type= NA
chr1	151291797	151327715	151291797	151327715	-	ENST00000368874.8@PI4KB	ENST00000368874.8	protein_coding	151327271,151315573,151307574,151306136,151303541,151302194,151301844,151298808,151294409,151294018,151291797	151327715,151316509,151307801,151306363,151303650,151302298,151301967,151299073,151294541,151294138,151293033	Gene ID= ENSG00000143393.16 TPM= 21.83 Transcript Type= protein_coding
chr1	151292132	151327411	151292132	151327411	-	ENST00000368873.5@PI4KB	ENST00000368873.5	protein_coding	151327271,151315573,151310211,151307574,151306136,151303541,151302194,151301844,151298808,151294409,151294018,151292132	151327411,151316509,151310255,151307801,151306363,151303650,151302298,151301967,151299073,151294541,151294138,151293033	Gene ID= ENSG00000143393.16 TPM= 44.99 Transcript Type= protein_coding
chr1	151340640	151347218	151340640	151347218	-	transcript8939.chr1.nic@RFX5	transcript8939.chr1.nic	protein_coding	151347151,151346489,151346205,151345928,151345106,151344728,151344417,151344197,151343681,151343342,151340640	151347218,151346606,151346333,151345961,151345188,151344847,151344536,151344278,151343882,151343442,151343178	Gene ID= ENSG00000143390.17 TPM= 33.86 Transcript Type= NA
chr1	151341960	151347357	151341960	151347357	-	ENST00000452671.6@RFX5	ENST00000452671.6	protein_coding	151347211,151346489,151346205,151345928,151345106,151344728,151344417,151344197,151343681,151343342,151341960	151347357,151346606,151346333,151345961,151345188,151344847,151344536,151344278,151343882,151343442,151343178	Gene ID= ENSG00000143390.17 TPM= 11.68 Transcript Type= protein_coding
chr1	151346967	151348027	151346967	151348027	+	ENST00000455503.1@AL391069.3	ENST00000455503.1	antisense_RNA	151346967,151347632	151347188,151348027	Gene ID= ENSG00000237976.1 TPM= 1.17 Transcript Type= antisense_RNA
chr1	151364302	151372733	151364302	151372733	-	ENST00000368868.9@SELENBP1	ENST00000368868.9	protein_coding	151372638,151369713,151369442,151369004,151368199,151366722,151366275,151365768,151365563,151365189,151364926,151364302	151372733,151369769,151369554,151369189,151368319,151366904,151366453,151365846,151365684,151365281,151365044,151364705	Gene ID= ENSG00000143416.20 TPM= 527.25 Transcript Type= protein_coding
chr1	151364305	151372703	151364305	151372703	-	ENST00000426705.6@SELENBP1	ENST00000426705.6	protein_coding	151372638,151369713,151369442,151369004,151368199,151366722,151366275,151365768,151365563,151365189,151364926,151364305	151372703,151369978,151369554,151369189,151368319,151366904,151366453,151365846,151365684,151365281,151365044,151364705	Gene ID= ENSG00000143416.20 TPM= 17.97 Transcript Type= protein_coding
chr1	151364309	151372706	151364309	151372706	-	ENST00000470345.5@SELENBP1	ENST00000470345.5	protein_coding	151372638,151369004,151368199,151366722,151366275,151365768,151365563,151365189,151364926,151364309	151372706,151369769,151368319,151366904,151366453,151365846,151365684,151365281,151365044,151364705	Gene ID= ENSG00000143416.20 TPM= 96.27 Transcript Type= retained_intron
chr1	151364305	151372700	151364305	151372700	-	ENST00000447402.7@SELENBP1	ENST00000447402.7	protein_coding	151372638,151369713,151369442,151368199,151366722,151366275,151365768,151365563,151365189,151364926,151364305	151372700,151369769,151369554,151368319,151366904,151366453,151365846,151365684,151365281,151365044,151364705	Gene ID= ENSG00000143416.20 TPM= 7.83 Transcript Type= protein_coding
chr1	151364530	151367358	151364530	151367358	+	transcript9004.chr1.nnic@NA	transcript9004.chr1.nnic	NA	151364530	151367358	Gene ID= novel_gene_chr1_9005 TPM= 7.01 Transcript Type= NA
chr1	151399534	151401944	151399534	151401944	+	ENST00000290541.6@PSMB4	ENST00000290541.6	protein_coding	151399534,151399981,151400442,151400764,151401239,151401542,151401817	151399727,151400187,151400588,151400845,151401355,151401630,151401944	Gene ID= ENSG00000159377.10 TPM= 40.87 Transcript Type= protein_coding
chr1	151399566	151402645	151399566	151402645	-	transcript9009.chr1.nnic@NA	transcript9009.chr1.nnic	NA	151399566	151402645	Gene ID= novel_gene_chr1_9010 TPM= 4.67 Transcript Type= NA
chr1	151402724	151459465	151402724	151459465	-	ENST00000271715.6@POGZ	ENST00000271715.6	protein_coding	151459152,151442081,151440928,151430666,151429603,151428123,151427823,151424955,151423949,151423397,151412296,151411625,151408694,151408409,151408100,151407235,151406911,151406607,151402724	151459465,151442205,151441086,151430841,151429711,151428413,151428041,151425061,151424286,151423551,151412396,151411771,151408828,151408581,151408240,151407291,151407023,151406631,151406464	Gene ID= ENSG00000143442.21 TPM= 15.18 Transcript Type= protein_coding
chr1	151453635	151457394	151453635	151457394	-	transcript9016.chr1.nnic@NA	transcript9016.chr1.nnic	NA	151453635	151457394	Gene ID= novel_gene_chr1_9017 TPM= 3.5 Transcript Type= NA
chr1	151511461	151538692	151511461	151538692	+	transcript9022.chr1.nnic@CGN	transcript9022.chr1.nnic	protein_coding	151511461,151518506,151520166,151520414,151520596,151523434,151524226,151524674,151525652,151526975,151529350,151529909,151530489,151532402,151533975,151535042,151535600,151535780,151536237,151536730,151537205	151511515,151519392,151520266,151520483,151520691,151523561,151524358,151524890,151525790,151527107,151529559,151530115,151530746,151532572,151534136,151535131,151535683,151535898,151536345,151536893,151538692	Gene ID= ENSG00000143375.14 TPM= 5.84 Transcript Type= NA
chr1	151511397	151538692	151511397	151538692	+	ENST00000271636.11@CGN	ENST00000271636.11	protein_coding	151511397,151518506,151520166,151520414,151520596,151523434,151524226,151524674,151525642,151526975,151529350,151529909,151530489,151532402,151533975,151535042,151535600,151535780,151536237,151536730,151537205	151511515,151519392,151520266,151520483,151520691,151523561,151524358,151524886,151525790,151527107,151529559,151530115,151530746,151532572,151534136,151535131,151535683,151535898,151536345,151536893,151538692	Gene ID= ENSG00000143375.14 TPM= 101.58 Transcript Type= protein_coding
chr1	151540305	151583583	151540305	151583583	+	ENST00000368849.7@TUFT1	ENST00000368849.7	protein_coding	151540305,151562091,151562585,151563904,151564525,151566163,151569657,151574270,151574911,151578721,151579649,151580942,151581644	151540426,151562165,151562686,151563990,151564614,151566228,151569770,151574398,151575005,151578826,151579732,151581042,151583583	Gene ID= ENSG00000143367.15 TPM= 10.51 Transcript Type= protein_coding
chr1	151540308	151583583	151540308	151583583	+	ENST00000368848.6@TUFT1	ENST00000368848.6	protein_coding	151540308,151562585,151563904,151564525,151566163,151569657,151574270,151574911,151578721,151579649,151580942,151581644	151540426,151562686,151563990,151564614,151566228,151569770,151574398,151575005,151578826,151579732,151581042,151583583	Gene ID= ENSG00000143367.15 TPM= 3.5 Transcript Type= protein_coding
chr1	151759647	151763491	151759647	151763491	-	transcript9039.chr1.nic@MRPL9	transcript9039.chr1.nic	protein_coding	151763327,151762990,151762376,151761962,151761451,151760816,151759647	151763491,151763146,151762500,151762155,151761552,151760899,151760181	Gene ID= ENSG00000143436.10 TPM= 7.01 Transcript Type= NA
chr1	151771564	151790522	151771564	151790522	-	ENST00000368827.10@TDRKH	ENST00000368827.10	protein_coding	151790380,151782899,151781481,151779951,151779103,151778685,151776439,151776096,151775820,151775392,151775065,151774710,151774413,151771564	151790522,151783049,151781587,151780140,151779242,151779006,151776599,151776268,151775884,151775543,151775166,151774806,151774504,151771986	Gene ID= ENSG00000182134.15 TPM= 1.17 Transcript Type= protein_coding
chr1	151773494	151790530	151773494	151790530	-	transcript9056.chr1.nic@TDRKH	transcript9056.chr1.nic	protein_coding	151790380,151782899,151781481,151779951,151779103,151778685,151776439,151776096,151775820,151775392,151775065,151774710,151774413,151773494	151790530,151783049,151781587,151780140,151779242,151779006,151776599,151776268,151775884,151775543,151775166,151774806,151774504,151774227	Gene ID= ENSG00000182134.15 TPM= 5.84 Transcript Type= NA
chr1	151773484	151790522	151773484	151790522	-	ENST00000368824.7@TDRKH	ENST00000368824.7	protein_coding	151790380,151782899,151781481,151779951,151779103,151778685,151776439,151776096,151775820,151775392,151775065,151774710,151773484	151790522,151783049,151781587,151780140,151779242,151779006,151776599,151776268,151775884,151775543,151775166,151774806,151774504	Gene ID= ENSG00000182134.15 TPM= 8.17 Transcript Type= protein_coding
chr1	151773498	151790505	151773498	151790505	-	ENST00000458431.6@TDRKH	ENST00000458431.6	protein_coding	151790405,151782899,151781481,151779951,151779103,151778685,151776439,151776096,151775820,151775392,151775065,151774710,151773498	151790505,151783049,151781587,151780140,151779242,151779006,151776599,151776268,151775884,151775543,151775166,151774806,151774504	Gene ID= ENSG00000182134.15 TPM= 1.17 Transcript Type= protein_coding
chr1	151806957	151831872	151806957	151831872	-	ENST00000318247.6@RORC	ENST00000318247.6	protein_coding	151831725,151829429,151817195,151816664,151814913,151814574,151813488,151813239,151812947,151811325,151806957	151831872,151829458,151817280,151816805,151815425,151814695,151813620,151813346,151813057,151811434,151807633	Gene ID= ENSG00000143365.17 TPM= 5.84 Transcript Type= protein_coding
chr1	151838231	151851549	151838231	151851549	+	transcript9071.chr1.nnic@AL450992.2	transcript9071.chr1.nnic	antisense_RNA	151838231,151839026,151841741,151844045,151850233	151838737,151839105,151842031,151844242,151851549	Gene ID= ENSG00000234614.1 TPM= 8.17 Transcript Type= NA
chr1	151873584	151909808	151873584	151909808	-	ENST00000368814.7@THEM4	ENST00000368814.7	protein_coding	151909360,151895008,151889214,151888273,151877001,151873584	151909808,151895194,151889373,151888383,151877125,151874928	Gene ID= ENSG00000159445.12 TPM= 3.5 Transcript Type= protein_coding
chr1	151874055	151909502	151874055	151909502	-	ENST00000471464.5@THEM4	ENST00000471464.5	protein_coding	151909360,151895008,151889983,151889214,151888273,151877001,151874055	151909502,151895194,151890214,151889373,151888383,151877125,151874928	Gene ID= ENSG00000159445.12 TPM= 4.67 Transcript Type= nonsense_mediated_decay
chr1	151982915	151994390	151982915	151994390	-	ENST00000368811.7@S100A10	ENST00000368811.7	protein_coding	151993752,151986099,151982915	151994390,151986251,151983324	Gene ID= ENSG00000197747.8 TPM= 437.85 Transcript Type= protein_coding
chr1	152032506	152037035	152032506	152037035	-	ENST00000271638.2@S100A11	ENST00000271638.2	protein_coding	152036913,152033648,152032506	152037035,152033800,152032823	Gene ID= ENSG00000163191.5 TPM= 505.57 Transcript Type= protein_coding
chr1	153357854	153361027	153357854	153361027	+	ENST00000368738.3@S100A9	ENST00000368738.3	protein_coding	153357854,153358269,153360644	153357881,153358433,153361027	Gene ID= ENSG00000163220.10 TPM= 47.87 Transcript Type= protein_coding
chr1	153373706	153375649	153373706	153375649	-	ENST00000368737.4@S100A12	ENST00000368737.4	protein_coding	153375552,153374455,153373706	153375649,153374612,153373967	Gene ID= ENSG00000163221.8 TPM= 3.5 Transcript Type= protein_coding
chr1	153390032	153391188	153390032	153391188	-	ENST00000368733.3@S100A8	ENST00000368733.3	protein_coding	153391041,153390395,153390032	153391188,153390557,153390243	Gene ID= ENSG00000143546.9 TPM= 56.04 Transcript Type= protein_coding
chr1	153534599	153536215	153534599	153536215	-	ENST00000496817.5@S100A6	ENST00000496817.5	protein_coding	153535949,153535202,153534599	153536215,153535375,153534830	Gene ID= ENSG00000197956.9 TPM= 25.69 Transcript Type= protein_coding
chr1	153534599	153536222	153534599	153536222	-	ENST00000368719.8@S100A6	ENST00000368719.8	protein_coding	153535949,153535202,153534599	153536222,153535360,153534830	Gene ID= ENSG00000197956.9 TPM= 573.29 Transcript Type= protein_coding
chr1	153543613	153545802	153543613	153545802	-	ENST00000354332.8@S100A4	ENST00000354332.8	protein_coding	153545753,153545470,153544654,153543613	153545802,153545518,153544809,153543923	Gene ID= ENSG00000196154.11 TPM= 3.39 Transcript Type= protein_coding
chr1	153543613	153545806	153543613	153545806	-	ENST00000468373.1@S100A4	ENST00000468373.1	protein_coding	153545753,153544654,153543613	153545806,153544809,153543939	Gene ID= ENSG00000196154.11 TPM= 2.8 Transcript Type= processed_transcript
chr1	153543613	153545885	153543613	153545885	-	ENST00000368716.8@S100A4	ENST00000368716.8	protein_coding	153545753,153544654,153543613	153545885,153544809,153543923	Gene ID= ENSG00000196154.11 TPM= 69.94 Transcript Type= protein_coding
chr1	153543613	153545097	153543613	153545097	-	ENST00000481009.1@S100A4	ENST00000481009.1	protein_coding	153544654,153543613	153545097,153543923	Gene ID= ENSG00000196154.11 TPM= 4.55 Transcript Type= processed_transcript
chr1	153543613	153545063	153543613	153545063	-	ENST00000368715.5@S100A4	ENST00000368715.5	protein_coding	153544958,153544654,153543613	153545063,153544809,153543923	Gene ID= ENSG00000196154.11 TPM= 3.39 Transcript Type= protein_coding
chr1	153547329	153549372	153547329	153549372	-	ENST00000368713.7@S100A3	ENST00000368713.7	protein_coding	153549181,153548345,153547329	153549372,153548490,153547846	Gene ID= ENSG00000188015.9 TPM= 1.17 Transcript Type= protein_coding
chr1	153561108	153565865	153561108	153565865	-	ENST00000368708.7@S100A2	ENST00000368708.7	protein_coding	153565506,153563734,153561108	153565865,153563887,153561591	Gene ID= ENSG00000196754.10 TPM= 1.17 Transcript Type= protein_coding
chr1	153606886	153613083	153606886	153613083	-	ENST00000368706.8@S100A16	ENST00000368706.8	protein_coding	153612952,153607999,153606886	153613083,153608177,153607692	Gene ID= ENSG00000188643.10 TPM= 49.62 Transcript Type= protein_coding
chr1	153606886	153609337	153606886	153609337	-	ENST00000368704.5@S100A16	ENST00000368704.5	protein_coding	153609178,153607999,153606886	153609337,153608177,153607692	Gene ID= ENSG00000188643.10 TPM= 5.25 Transcript Type= protein_coding
chr1	153614255	153616986	153614255	153616986	-	ENST00000368702.5@S100A14	ENST00000368702.5	protein_coding	153616853,153616295,153615829,153615235,153614255	153616986,153616355,153615936,153615381,153615022	Gene ID= ENSG00000189334.8 TPM= 70.06 Transcript Type= protein_coding
chr1	153614255	153615938	153614255	153615938	-	ENST00000476873.5@S100A14	ENST00000476873.5	protein_coding	153615829,153615235,153614255	153615938,153615381,153615022	Gene ID= ENSG00000189334.8 TPM= 10.51 Transcript Type= protein_coding
chr1	153614258	153616332	153614258	153616332	-	ENST00000344616.3@S100A14	ENST00000344616.3	protein_coding	153616295,153615829,153615235,153614258	153616332,153615936,153615381,153615022	Gene ID= ENSG00000189334.8 TPM= 54.88 Transcript Type= protein_coding
chr1	153618804	153627268	153618804	153627268	-	ENST00000392623.5@S100A13	ENST00000392623.5	protein_coding	153627139,153626320,153618804	153627268,153626533,153619038	Gene ID= ENSG00000189171.14 TPM= 1.17 Transcript Type= protein_coding
chr1	153618804	153627622	153618804	153627622	-	transcript9147.chr1.nic@S100A13	transcript9147.chr1.nic	protein_coding	153627483,153626320,153618804	153627622,153626533,153619038	Gene ID= ENSG00000189171.14 TPM= 12.84 Transcript Type= NA
chr1	153633982	153646305	153633982	153646305	+	ENST00000368690.7@CHTOP	ENST00000368690.7	protein_coding	153633982,153636572,153638295,153642243,153643227,153645064	153634343,153636653,153638448,153642429,153643364,153646305	Gene ID= ENSG00000160679.12 TPM= 21.6 Transcript Type= protein_coding
chr1	153634049	153646306	153634049	153646306	+	ENST00000368694.7@CHTOP	ENST00000368694.7	protein_coding	153634049,153636572,153638295,153642246,153643227,153645064	153634343,153636653,153638448,153642429,153643364,153646306	Gene ID= ENSG00000160679.12 TPM= 15.76 Transcript Type= protein_coding
chr1	153634045	153645470	153634045	153645470	+	transcript9132.chr1.nic@CHTOP	transcript9132.chr1.nic	protein_coding	153634045,153636572,153642243,153643227,153645064	153634343,153638448,153642429,153643364,153645470	Gene ID= ENSG00000160679.12 TPM= 4.67 Transcript Type= NA
chr1	153634045	153646302	153634045	153646302	+	transcript9140.chr1.nic@CHTOP	transcript9140.chr1.nic	protein_coding	153634045,153636572,153642246,153645064	153634343,153638448,153642429,153646302	Gene ID= ENSG00000160679.12 TPM= 2.34 Transcript Type= NA
chr1	153634075	153645470	153634075	153645470	+	ENST00000495554.1@CHTOP	ENST00000495554.1	protein_coding	153634075,153636572,153645064	153634343,153638448,153645470	Gene ID= ENSG00000160679.12 TPM= 3.5 Transcript Type= processed_transcript
chr1	153644356	153645470	153644356	153645470	+	transcript9150.chr1.nnic@NA	transcript9150.chr1.nnic	NA	153644356	153645470	Gene ID= novel_gene_chr1_9151 TPM= 4.67 Transcript Type= NA
chr1	153658654	153661830	153658654	153661830	+	ENST00000368685.5@SNAPIN	ENST00000368685.5	protein_coding	153658654,153659138,153659448,153661200	153658886,153659184,153659566,153661830	Gene ID= ENSG00000143553.10 TPM= 56.63 Transcript Type= protein_coding
chr1	153658714	153661829	153658714	153661829	+	ENST00000462880.1@SNAPIN	ENST00000462880.1	protein_coding	153658714,153659448,153661200	153658886,153659566,153661829	Gene ID= ENSG00000143553.10 TPM= 8.76 Transcript Type= processed_transcript
chr1	153661788	153671028	153661788	153671028	-	ENST00000615950.4@ILF2	ENST00000615950.4	protein_coding	153670918,153670171,153669836,153668453,153668000,153667555,153665663,153665220,153664396,153664043,153663215,153663019,153662705,153661788	153671028,153670230,153669878,153668576,153668077,153667657,153665728,153665336,153664474,153664130,153663276,153663133,153662795,153662556	Gene ID= ENSG00000143621.16 TPM= 8.17 Transcript Type= protein_coding
chr1	153662036	153671048	153662036	153671048	-	ENST00000361891.8@ILF2	ENST00000361891.8	protein_coding	153670918,153670171,153669836,153668453,153668000,153667555,153665663,153665220,153664396,153664043,153663215,153663019,153662705,153662036	153671048,153670230,153669878,153668557,153668077,153667657,153665728,153665336,153664474,153664130,153663276,153663133,153662795,153662556	Gene ID= ENSG00000143621.16 TPM= 106.25 Transcript Type= protein_coding
chr1	153678637	153693992	153678637	153693992	+	ENST00000368680.3@NPR1	ENST00000368680.3	protein_coding	153678637,153680501,153681180,153681704,153682498,153683376,153683740,153684964,153685806,153686123,153686646,153687016,153687200,153687634,153688053,153688953,153689188,153689453,153689806,153690284,153693106,153693352	153679829,153680700,153681293,153681839,153682589,153683511,153683824,153685084,153685880,153686200,153686750,153687087,153687356,153687789,153688221,153689099,153689311,153689521,153689980,153690382,153693197,153693992	Gene ID= ENSG00000169418.9 TPM= 207.83 Transcript Type= protein_coding
chr1	153728050	153774079	153728050	153774079	+	transcript9158.chr1.nic@INTS3	transcript9158.chr1.nic	protein_coding	153728050,153740651,153741285,153746957,153751095,153752279,153754642,153757572,153759526,153760311,153760827,153761570,153762728,153763233,153763832,153764118,153764690,153764944,153767674,153768893,153769769,153770198,153770685,153771796,153772340,153772639,153772925,153773193	153728784,153740734,153741368,153748755,153751239,153752408,153754739,153757763,153759613,153760390,153760918,153761676,153762847,153763362,153763886,153764221,153764734,153765063,153767827,153768961,153769844,153770311,153770733,153771963,153772440,153772711,153773081,153774079	Gene ID= ENSG00000143624.13 TPM= 24.52 Transcript Type= NA
chr1	153750853	153774079	153750853	153774079	+	transcript9159.chr1.nic@INTS3	transcript9159.chr1.nic	protein_coding	153750853,153752279,153754642,153757572,153759526,153760311,153760827,153761570,153762728,153763233,153763832,153764118,153764690,153764944,153767674,153768893,153769769,153770198,153770685,153771796,153772340,153772639,153772925,153773193	153751239,153752408,153754739,153757763,153759613,153760390,153760918,153761676,153762847,153763362,153763886,153764221,153764734,153765063,153767827,153768961,153769844,153770311,153770733,153771963,153772440,153772711,153773081,153774079	Gene ID= ENSG00000143624.13 TPM= 22.18 Transcript Type= NA
chr1	153728067	153774808	153728067	153774808	+	ENST00000318967.6@INTS3	ENST00000318967.6	protein_coding	153728067,153740651,153741285,153746957,153747279,153748689,153751095,153752279,153754642,153757572,153759526,153760311,153760827,153761570,153762728,153763233,153763832,153764118,153764690,153764944,153767674,153768893,153769769,153770198,153770685,153771796,153772340,153772639,153772925,153773193	153728784,153740734,153741368,153747070,153747363,153748755,153751239,153752408,153754739,153757763,153759613,153760390,153760918,153761676,153762847,153763362,153763886,153764221,153764734,153765063,153767827,153768961,153769844,153770311,153770733,153771963,153772440,153772711,153773081,153774808	Gene ID= ENSG00000143624.13 TPM= 8.17 Transcript Type= protein_coding
chr1	153774354	153780157	153774354	153780157	+	ENST00000271857.6@SLC27A3	ENST00000271857.6	protein_coding	153774354,153776518,153777062,153777761,153778161,153778463,153778687,153779114,153779343,153779826	153776164,153776727,153777220,153777885,153778355,153778553,153778885,153779211,153779473,153780157	Gene ID= ENSG00000143554.13 TPM= 193.69 Transcript Type= protein_coding
chr1	153775299	153780157	153775299	153780157	+	transcript9190.chr1.nic@SLC27A3	transcript9190.chr1.nic	protein_coding	153775299,153776518,153777062,153777761,153778161,153778463,153778687,153779114,153779343,153779931	153776164,153776727,153777220,153777885,153778355,153778553,153778885,153779211,153779473,153780157	Gene ID= ENSG00000143554.13 TPM= 8.04 Transcript Type= NA
chr1	153775263	153780157	153775263	153780157	+	transcript9195.chr1.nnic@SLC27A3	transcript9195.chr1.nnic	protein_coding	153775263,153776518,153777062,153777761,153778161,153778463,153779114,153779343,153779826	153776164,153776727,153777220,153777885,153778355,153778553,153779211,153779473,153780157	Gene ID= ENSG00000143554.13 TPM= 8.63 Transcript Type= NA
chr1	153804725	153922975	153804725	153922975	-	ENST00000368655.4@GATAD2B	ENST00000368655.4	protein_coding	153922733,153828013,153819606,153818791,153818040,153817372,153816273,153813250,153812022,153811731,153804725	153922975,153828348,153819735,153818922,153818171,153817542,153816588,153813452,153812132,153811848,153810310	Gene ID= ENSG00000143614.9 TPM= 84.07 Transcript Type= protein_coding
chr1	153808851	153815111	153808851	153815111	-	transcript9234.chr1.nnic@GATAD2B	transcript9234.chr1.nnic	protein_coding	153813250,153812022,153811731,153808851	153815111,153812134,153811850,153810310	Gene ID= ENSG00000143614.9 TPM= 36.78 Transcript Type= NA
chr1	153808851	153815109	153808851	153815109	-	transcript9235.chr1.nnic@GATAD2B	transcript9235.chr1.nnic	protein_coding	153812022,153811731,153808851	153815109,153811850,153810310	Gene ID= ENSG00000143614.9 TPM= 20.43 Transcript Type= NA
chr1	153947675	153958643	153947675	153958643	-	transcript9252.chr1.nic@CRTC2	transcript9252.chr1.nic	protein_coding	153958345,153955065,153954873,153954255,153953538,153953266,153952805,153952571,153952397,153952018,153951260,153949115,153948458,153947675	153958643,153955166,153954989,153954316,153953606,153953369,153952834,153952650,153952446,153952262,153951666,153949384,153948644,153948329	Gene ID= ENSG00000160741.16 TPM= 20.63 Transcript Type= NA
chr1	153947675	153955587	153947675	153955587	-	transcript9259.chr1.nic@CRTC2	transcript9259.chr1.nic	protein_coding	153954873,153954255,153953538,153953266,153952805,153952571,153952397,153952018,153951260,153949115,153948458,153947675	153955587,153954316,153953606,153953369,153952834,153952635,153952446,153952262,153951666,153949384,153948644,153948329	Gene ID= ENSG00000160741.16 TPM= 21.22 Transcript Type= NA
chr1	153947675	153958625	153947675	153958625	-	ENST00000368633.1@CRTC2	ENST00000368633.1	protein_coding	153958345,153955065,153954873,153954255,153953538,153953266,153952805,153952571,153952397,153952018,153951260,153949115,153948458,153947675	153958625,153955166,153954989,153954316,153953606,153953369,153952834,153952635,153952446,153952262,153951666,153949384,153948644,153948329	Gene ID= ENSG00000160741.16 TPM= 42.23 Transcript Type= protein_coding
chr1	153959099	153963492	153959099	153963492	-	ENST00000621013.4@SLC39A1	ENST00000621013.4	protein_coding	153963177,153962529,153962220,153959099	153963492,153962747,153962350,153960754	Gene ID= ENSG00000143570.17 TPM= 28.43 Transcript Type= protein_coding
chr1	153959099	153963572	153959099	153963572	-	ENST00000356205.8@SLC39A1	ENST00000356205.8	protein_coding	153963495,153962529,153962220,153959099	153963572,153962747,153962350,153960754	Gene ID= ENSG00000143570.17 TPM= 427.75 Transcript Type= protein_coding
chr1	153959110	153963475	153959110	153963475	-	ENST00000368623.7@SLC39A1	ENST00000368623.7	protein_coding	153962529,153962220,153959110	153963475,153962350,153960754	Gene ID= ENSG00000143570.17 TPM= 29.01 Transcript Type= protein_coding
chr1	153959111	153963462	153959111	153963462	-	ENST00000368621.5@SLC39A1	ENST00000368621.5	protein_coding	153963059,153962529,153962220,153959111	153963462,153962747,153962350,153960754	Gene ID= ENSG00000143570.17 TPM= 11.5 Transcript Type= protein_coding
chr1	153967487	153974359	153967487	153974359	+	transcript9274.chr1.nnic@CREB3L4	transcript9274.chr1.nnic	protein_coding	153967487,153968522,153968930,153969334,153972744,153972972,153973195,153973380,153973620,153973872	153967762,153968699,153969176,153969455,153972836,153973078,153973263,153973464,153973716,153974359	Gene ID= ENSG00000143578.15 TPM= 2.72 Transcript Type= NA
chr1	153967887	153974359	153967887	153974359	+	transcript9276.chr1.nic@CREB3L4	transcript9276.chr1.nic	protein_coding	153967887,153968522,153968930,153969334,153972744,153972972,153973195,153973380,153973620,153973872	153968164,153968639,153969176,153969455,153972836,153973078,153973263,153973464,153973716,153974359	Gene ID= ENSG00000143578.15 TPM= 2.72 Transcript Type= NA
chr1	153968237	153974356	153968237	153974356	+	ENST00000368603.5@CREB3L4	ENST00000368603.5	protein_coding	153968237,153968522,153968930,153969334,153972744,153972972,153973195,153973380,153973620,153973872	153968310,153968699,153969176,153969455,153972836,153973078,153973263,153973464,153973716,153974356	Gene ID= ENSG00000143578.15 TPM= 1.17 Transcript Type= protein_coding
chr1	153967903	153974363	153967903	153974363	+	ENST00000368607.7@CREB3L4	ENST00000368607.7	protein_coding	153967903,153968522,153968930,153969334,153972744,153972972,153973195,153973380,153973620,153973872	153968164,153968699,153969176,153969455,153972836,153973078,153973263,153973464,153973716,153974363	Gene ID= ENSG00000143578.15 TPM= 5.06 Transcript Type= protein_coding
chr1	153974512	153977671	153974512	153977671	-	transcript9281.chr1.nic@JTB	transcript9281.chr1.nic	protein_coding	153977544,153977170,153976976,153976693,153975826,153974512	153977671,153977389,153977013,153976775,153975905,153974835	Gene ID= ENSG00000143543.14 TPM= 6.42 Transcript Type= NA
chr1	153974269	153977688	153974269	153977688	-	ENST00000271843.8@JTB	ENST00000271843.8	protein_coding	153977170,153976976,153976693,153975826,153974269	153977688,153977013,153976775,153975905,153974835	Gene ID= ENSG00000143543.14 TPM= 21.02 Transcript Type= protein_coding
chr1	153974512	153977660	153974512	153977660	-	ENST00000368589.5@JTB	ENST00000368589.5	protein_coding	153977170,153976693,153975826,153974512	153977660,153977013,153975905,153974835	Gene ID= ENSG00000143543.14 TPM= 7.59 Transcript Type= protein_coding
chr1	153981651	153986352	153981651	153986352	-	ENST00000368575.3@RAB13	ENST00000368575.3	protein_coding	153986113,153984721,153983521,153983219,153982719,153982535,153982391,153981651	153986352,153984781,153983581,153983296,153982808,153982600,153982444,153982176	Gene ID= ENSG00000143545.8 TPM= 133.11 Transcript Type= protein_coding
chr1	153990763	153992150	153990763	153992150	+	ENST00000477151.1@RPS27	ENST00000477151.1	protein_coding	153990763,153990914,153991115,153991566,153992065	153990802,153991034,153991223,153991676,153992150	Gene ID= ENSG00000177954.11 TPM= 17.51 Transcript Type= processed_transcript
chr1	153990759	153992150	153990759	153992150	+	ENST00000368567.4@RPS27	ENST00000368567.4	protein_coding	153990759,153991115,153991566,153992065	153990802,153991223,153991676,153992150	Gene ID= ENSG00000177954.11 TPM= 699.97 Transcript Type= protein_coding
chr1	153990763	153992145	153990763	153992145	+	ENST00000493224.5@RPS27	ENST00000493224.5	protein_coding	153990763,153991115,153991566,153992065	153991034,153991223,153991676,153992145	Gene ID= ENSG00000177954.11 TPM= 25.1 Transcript Type= processed_transcript
chr1	154155308	154183172	154155308	154183172	-	ENST00000368533.7@TPM3	ENST00000368533.7	protein_coding	154182988,154176115,154173084,154172908,154172029,154170649,154170400,154155308	154183172,154176248,154173201,154172978,154172104,154170711,154170469,154157721	Gene ID= ENSG00000143549.19 TPM= 2.34 Transcript Type= protein_coding
chr1	154155304	154183249	154155304	154183249	-	ENST00000611659.4@TPM3	ENST00000611659.4	protein_coding	154182988,154176115,154173084,154172908,154172029,154170400,154155304	154183249,154176248,154173201,154172978,154172104,154170469,154157721	Gene ID= ENSG00000143549.19 TPM= 1.17 Transcript Type= protein_coding
chr1	154156364	154183205	154156364	154183205	-	ENST00000330188.13@TPM3	ENST00000330188.13	protein_coding	154182988,154176115,154173084,154172908,154171413,154170649,154170400,154156364	154183205,154176248,154173201,154172978,154171488,154170711,154170469,154157721	Gene ID= ENSG00000143549.19 TPM= 30.94 Transcript Type= protein_coding
chr1	154158609	154183130	154158609	154183130	-	ENST00000368531.6@TPM3	ENST00000368531.6	protein_coding	154182988,154176115,154173084,154172908,154172029,154170649,154170400,154158609	154183130,154176248,154173201,154172978,154172104,154170711,154170469,154159048	Gene ID= ENSG00000143549.19 TPM= 2.34 Transcript Type= protein_coding
chr1	154206706	154220606	154206706	154220606	-	ENST00000368521.9@C1orf43	ENST00000368521.9	protein_coding	154220342,154219836,154214457,154213893,154212458,154212320,154206706	154220606,154219937,154214574,154213946,154212624,154212378,154207648	Gene ID= ENSG00000143612.19 TPM= 207.83 Transcript Type= protein_coding
chr1	154206720	154220624	154206720	154220624	-	ENST00000350592.7@C1orf43	ENST00000350592.7	protein_coding	154220342,154214457,154213893,154212458,154212320,154206720	154220624,154214574,154213946,154212624,154212378,154207648	Gene ID= ENSG00000143612.19 TPM= 36.2 Transcript Type= protein_coding
chr1	154206720	154220619	154206720	154220619	-	ENST00000362076.8@C1orf43	ENST00000362076.8	protein_coding	154220342,154214457,154212458,154212320,154206720	154220619,154214574,154212624,154212378,154207648	Gene ID= ENSG00000143612.19 TPM= 8.17 Transcript Type= protein_coding
chr1	154220943	154270847	154220943	154270847	+	transcript9327.chr1.nic@UBAP2L	transcript9327.chr1.nic	protein_coding	154220943,154225084,154227282,154228615,154234591,154235196,154236566,154237024,154241513,154243217,154246204,154249239,154251041,154251481,154253900,154254836,154255152,154255683,154257063,154257346,154258977,154259948,154260892,154261592,154266501,154268757,154269362,154270200	154220975,154225213,154227359,154228725,154234759,154235291,154236611,154237136,154241565,154243302,154246375,154249437,154251318,154251653,154254089,154254890,154255326,154255755,154257258,154257434,154259030,154260029,154261109,154261697,154266568,154268954,154269412,154270847	Gene ID= ENSG00000143569.18 TPM= 11.85 Transcript Type= NA
chr1	154220849	154270852	154220849	154270852	+	ENST00000428931.5@UBAP2L	ENST00000428931.5	protein_coding	154220849,154225084,154227282,154228615,154234591,154235196,154236566,154237024,154241513,154243217,154246204,154249239,154251041,154251481,154253900,154254836,154255152,154255683,154257063,154257346,154258977,154259948,154260892,154261592,154266501,154268757,154270200	154220975,154225213,154227359,154228725,154234759,154235291,154236611,154237136,154241565,154243302,154246375,154249437,154251318,154251653,154254089,154254890,154255326,154255755,154257258,154257434,154259030,154260029,154261109,154261697,154266568,154268954,154270852	Gene ID= ENSG00000143569.18 TPM= 16.72 Transcript Type= protein_coding
chr1	154220857	154271509	154220857	154271509	+	transcript9335.chr1.nic@UBAP2L	transcript9335.chr1.nic	protein_coding	154220857,154225084,154227282,154228615,154234591,154235196,154236566,154237024,154241513,154243217,154246204,154249239,154251041,154251481,154253900,154254836,154255152,154255683,154257063,154257346,154258977,154259948,154260892,154261592,154266501,154268757,154270881	154220975,154225213,154227359,154228725,154234759,154235291,154236611,154237136,154241565,154243302,154246375,154249437,154251318,154251653,154254089,154254890,154255326,154255755,154257258,154257434,154259030,154260029,154261109,154261697,154266568,154268954,154271509	Gene ID= ENSG00000143569.18 TPM= 6.71 Transcript Type= NA
chr1	154220945	154270852	154220945	154270852	+	transcript9337.chr1.nic@UBAP2L	transcript9337.chr1.nic	protein_coding	154220945,154225084,154227282,154228615,154234591,154235196,154236566,154237024,154241513,154243217,154246204,154249239,154251041,154251481,154253900,154254836,154255152,154255683,154257063,154257346,154258977,154259948,154260892,154261592,154266501,154268757,154270200	154221040,154225213,154227359,154228725,154234759,154235291,154236611,154237136,154241565,154243302,154246375,154249437,154251318,154251653,154254089,154254890,154255326,154255755,154257258,154257434,154259030,154260029,154261109,154261697,154266568,154268954,154270852	Gene ID= ENSG00000143569.18 TPM= 17.4 Transcript Type= NA
chr1	154220849	154263505	154220849	154263505	+	ENST00000613315.4@UBAP2L	ENST00000613315.4	protein_coding	154220849,154225084,154227282,154228615,154234591,154235196,154236566,154237024,154241513,154243217,154246204,154249239,154251041,154251481,154253900,154254836,154255152,154255683,154257063,154257346,154258977,154259948,154260892,154261592,154263103	154220975,154225213,154227359,154228725,154234738,154235291,154236611,154237136,154241565,154243302,154246375,154249437,154251318,154251653,154254089,154254890,154255326,154255755,154257258,154257434,154259030,154260029,154261109,154261697,154263505	Gene ID= ENSG00000143569.18 TPM= 1.95 Transcript Type= protein_coding
chr1	154220945	154263505	154220945	154263505	+	transcript9351.chr1.nic@UBAP2L	transcript9351.chr1.nic	protein_coding	154220945,154225084,154227282,154228615,154234591,154235196,154236566,154237024,154241513,154243217,154246204,154249239,154251041,154251481,154253900,154254836,154255152,154255683,154257063,154257346,154258977,154259948,154260892,154261592,154263103	154221040,154225213,154227359,154228725,154234759,154235291,154236611,154237136,154241565,154243302,154246375,154249437,154251318,154251653,154254089,154254890,154255326,154255755,154257258,154257434,154259030,154260029,154261109,154261697,154263505	Gene ID= ENSG00000143569.18 TPM= 18.1 Transcript Type= NA
chr1	154221103	154263505	154221103	154263505	+	transcript9352.chr1.nic@UBAP2L	transcript9352.chr1.nic	protein_coding	154221103,154225084,154227282,154228615,154234591,154235196,154236566,154237024,154241513,154243217,154246204,154249239,154251041,154251481,154253900,154254836,154255152,154255683,154257063,154257346,154258977,154259948,154260892,154261592,154263103	154221396,154225213,154227359,154228725,154234759,154235291,154236611,154237136,154241565,154243302,154246375,154249437,154251318,154251653,154254089,154254890,154255326,154255755,154257258,154257434,154259030,154260029,154261109,154261697,154263505	Gene ID= ENSG00000143569.18 TPM= 7.2 Transcript Type= NA
chr1	154225082	154270853	154225082	154270853	+	ENST00000361546.6@UBAP2L	ENST00000361546.6	protein_coding	154225082,154227282,154228615,154234591,154235196,154236566,154237024,154241513,154243217,154246204,154249239,154251041,154251481,154253900,154254836,154255152,154255683,154257063,154257346,154258977,154259948,154260892,154261592,154266501,154268757,154270200	154225213,154227359,154228725,154234759,154235291,154236611,154237136,154241565,154243302,154246375,154249437,154251318,154251653,154254089,154254890,154255326,154255755,154257258,154257434,154259030,154260029,154261109,154261697,154266568,154268954,154270853	Gene ID= ENSG00000143569.18 TPM= 2.42 Transcript Type= protein_coding
chr1	154272511	154275875	154272511	154275875	+	ENST00000328703.11@HAX1	ENST00000328703.11	protein_coding	154272511,154273336,154273774,154274950,154275154,154275393,154275616	154272776,154273598,154273961,154275001,154275260,154275483,154275875	Gene ID= ENSG00000143575.14 TPM= 90.49 Transcript Type= protein_coding
chr1	154272586	154275875	154272586	154275875	+	transcript9377.chr1.nic@HAX1	transcript9377.chr1.nic	protein_coding	154272586,154273336,154273774,154274950,154275393,154275616	154272776,154273598,154273961,154275260,154275483,154275875	Gene ID= ENSG00000143575.14 TPM= 3.5 Transcript Type= NA
chr1	154272629	154275875	154272629	154275875	+	ENST00000531435.5@HAX1	ENST00000531435.5	protein_coding	154272629,154273336,154274950,154275154,154275393,154275616	154272776,154273961,154275001,154275260,154275483,154275875	Gene ID= ENSG00000143575.14 TPM= 6.42 Transcript Type= retained_intron
chr1	154325529	154349575	154325529	154349575	+	transcript9382.chr1.nic@ATP8B2	transcript9382.chr1.nic	protein_coding	154325529,154328105,154330396,154330815,154331048,154331444,154331606,154331954,154332618,154334107,154334503,154337348,154340854,154342480,154342796,154343113,154343453,154343893,154344143,154344395,154344641,154344971,154345322,154345800,154346231,154346620,154348408,154348840	154325702,154328172,154330454,154330928,154331146,154331505,154331678,154332024,154332697,154334265,154334591,154337544,154341062,154342523,154342961,154343301,154343568,154344057,154344254,154344500,154344785,154345154,154345545,154345883,154346476,154346758,154348538,154349575	Gene ID= ENSG00000143515.16 TPM= 8.17 Transcript Type= NA
chr1	154405406	154466877	154405406	154466877	+	transcript9385.chr1.nic@IL6R	transcript9385.chr1.nic	protein_coding	154405406,154429196,154430483,154434519,154434990,154435969,154445047,154448125,154449911,154454488,154465134	154405714,154429444,154430606,154434700,154435156,154436110,154445094,154448171,154449980,154454581,154466877	Gene ID= ENSG00000160712.12 TPM= 6.42 Transcript Type= NA
chr1	154405584	154466877	154405584	154466877	+	transcript9390.chr1.nic@IL6R	transcript9390.chr1.nic	protein_coding	154405584,154429196,154430483,154434519,154434990,154448125,154449911,154454488,154465134	154405714,154429444,154430606,154434700,154435156,154448171,154449980,154454581,154466877	Gene ID= ENSG00000160712.12 TPM= 5.25 Transcript Type= NA
chr1	154440657	154443482	154440657	154443482	-	transcript9394.chr1.nnic@NA	transcript9394.chr1.nnic	NA	154440657	154443482	Gene ID= novel_gene_chr1_9395 TPM= 3.5 Transcript Type= NA
chr1	154469637	154502550	154469637	154502550	-	transcript9429.chr1.nic@SHE	transcript9429.chr1.nic	protein_coding	154501436,154499112,154489051,154486527,154485943,154469637	154502550,154499238,154489356,154486683,154486062,154470362	Gene ID= ENSG00000169291.9 TPM= 12.26 Transcript Type= NA
chr1	154479481	154502113	154479481	154502113	-	ENST00000304760.2@SHE	ENST00000304760.2	protein_coding	154501436,154499112,154489051,154486527,154485943,154479481	154502113,154499238,154489356,154486683,154486062,154484335	Gene ID= ENSG00000169291.9 TPM= 25.1 Transcript Type= protein_coding
chr1	154479481	154489166	154479481	154489166	-	ENST00000555188.5@SHE	ENST00000555188.5	protein_coding	154489051,154486527,154479481	154489166,154486683,154486062	Gene ID= ENSG00000169291.9 TPM= 12.26 Transcript Type= protein_coding
chr1	154501761	154548147	154501761	154548147	+	transcript9402.chr1.nnic@TDRD10	transcript9402.chr1.nnic	protein_coding	154501761,154506877,154507241,154508423,154509796,154520304,154521323,154542024,154543963,154544372,154544795,154547409	154503029,154506905,154507320,154508481,154509870,154520374,154521479,154542066,154544110,154544517,154544949,154548147	Gene ID= ENSG00000163239.12 TPM= 3.21 Transcript Type= NA
chr1	154501881	154548147	154501881	154548147	+	transcript9404.chr1.nnic@TDRD10	transcript9404.chr1.nnic	protein_coding	154501881,154506877,154507241,154508423,154520304,154521323,154539327,154542024,154543963,154544372,154544795,154547409	154503029,154506905,154507320,154508481,154520374,154521479,154539715,154542066,154544110,154544517,154544949,154548147	Gene ID= ENSG00000163239.12 TPM= 3.21 Transcript Type= NA
chr1	154501862	154548147	154501862	154548147	+	transcript9407.chr1.nic@TDRD10	transcript9407.chr1.nic	protein_coding	154501862,154506877,154507241,154508423,154520304,154521323,154542024,154543963,154544372,154544795,154547409,154547678	154503029,154506905,154507320,154508481,154520374,154521479,154542066,154544110,154544517,154544949,154547479,154548147	Gene ID= ENSG00000163239.12 TPM= 5.06 Transcript Type= NA
chr1	154501841	154548147	154501841	154548147	+	transcript9409.chr1.nic@TDRD10	transcript9409.chr1.nic	protein_coding	154501841,154506877,154507241,154508423,154520304,154521323,154542024,154543963,154544372,154544795,154547409,154547678	154503029,154506905,154507320,154508481,154520374,154521479,154542821,154544110,154544517,154544949,154547479,154548147	Gene ID= ENSG00000163239.12 TPM= 2.72 Transcript Type= NA
chr1	154501855	154548147	154501855	154548147	+	transcript9411.chr1.nic@TDRD10	transcript9411.chr1.nic	protein_coding	154501855,154506877,154507241,154508423,154520304,154521323,154542024,154543963,154544372,154544795,154547409	154503029,154506905,154507320,154508481,154520374,154521479,154542066,154544110,154544517,154544949,154548147	Gene ID= ENSG00000163239.12 TPM= 9.05 Transcript Type= NA
chr1	154501844	154540530	154501844	154540530	+	transcript9420.chr1.nnic@TDRD10	transcript9420.chr1.nnic	protein_coding	154501844,154506877,154507241,154508423,154520304,154521323,154539327	154503029,154506905,154507320,154508481,154520374,154521479,154540530	Gene ID= ENSG00000163239.12 TPM= 7.01 Transcript Type= NA
chr1	154540167	154548147	154540167	154548147	+	transcript9421.chr1.nnic@TDRD10	transcript9421.chr1.nnic	protein_coding	154540167,154542024,154543963,154544372,154544795,154547409,154547678	154540222,154542066,154544110,154544517,154544949,154547479,154548147	Gene ID= ENSG00000163239.12 TPM= 2.72 Transcript Type= NA
chr1	154540174	154548147	154540174	154548147	+	transcript9427.chr1.nnic@TDRD10	transcript9427.chr1.nnic	protein_coding	154540174,154542024,154543963,154544372,154544795,154547409	154540232,154542066,154544110,154544517,154544949,154548147	Gene ID= ENSG00000163239.12 TPM= 3.21 Transcript Type= NA
chr1	154530400	154537203	154530400	154537203	-	transcript9448.chr1.nnic@NA	transcript9448.chr1.nnic	NA	154530400	154537203	Gene ID= novel_gene_chr1_9449 TPM= 5.84 Transcript Type= NA
chr1	154548577	154558633	154548577	154558633	-	ENST00000292211.4@UBE2Q1	ENST00000292211.4	protein_coding	154558227,154555860,154555428,154554735,154553032,154552736,154552404,154552093,154551921,154551771,154551397,154550938,154548577	154558633,154555964,154555532,154554785,154553172,154552820,154552464,154552183,154551979,154551819,154551492,154551004,154550469	Gene ID= ENSG00000160714.9 TPM= 11.68 Transcript Type= protein_coding
chr1	154582067	154608186	154582067	154608186	-	transcript9459.chr1.nic@ADAR	transcript9459.chr1.nic	protein_coding	154607992,154602385,154601041,154598402,154597828,154597123,154596805,154590184,154589757,154589369,154588551,154588125,154586181,154585753,154585217,154582067	154608186,154602626,154602248,154598585,154597976,154597267,154596995,154590409,154589928,154589462,154588673,154588258,154586363,154585865,154585344,154585043	Gene ID= ENSG00000160710.15 TPM= 18.8 Transcript Type= NA
chr1	154582067	154627968	154582067	154627968	-	transcript9462.chr1.nnic@ADAR	transcript9462.chr1.nnic	protein_coding	154627855,154601041,154598402,154597828,154597123,154596805,154590184,154589757,154589369,154588551,154588125,154586181,154585753,154585217,154582067	154627968,154602626,154598585,154597976,154597267,154596938,154590409,154589928,154589462,154588673,154588258,154586363,154585865,154585344,154585043	Gene ID= ENSG00000160710.15 TPM= 14.71 Transcript Type= NA
chr1	154582067	154627964	154582067	154627964	-	ENST00000368471.7@ADAR	ENST00000368471.7	protein_coding	154627855,154601041,154598402,154597828,154597123,154596805,154590184,154589757,154589369,154588551,154588125,154586181,154585753,154585217,154582067	154627964,154602626,154598585,154597976,154597267,154596995,154590409,154589928,154589462,154588673,154588258,154586363,154585865,154585344,154585043	Gene ID= ENSG00000160710.15 TPM= 17.63 Transcript Type= protein_coding
chr1	154582067	154608202	154582067	154608202	-	transcript9465.chr1.nic@ADAR	transcript9465.chr1.nic	protein_coding	154607992,154601041,154598402,154597828,154597123,154596805,154590262,154589757,154589369,154588551,154588125,154586181,154585753,154585217,154582067	154608202,154602626,154598585,154597976,154597267,154596995,154590409,154589928,154589462,154588673,154588258,154586363,154585865,154585344,154585043	Gene ID= ENSG00000160710.15 TPM= 19.09 Transcript Type= NA
chr1	154600154	154608204	154600154	154608204	-	transcript9470.chr1.nic@ADAR	transcript9470.chr1.nic	protein_coding	154607992,154600154	154608204,154602626	Gene ID= ENSG00000160710.15 TPM= 3.5 Transcript Type= NA
chr1	154600480	154608203	154600480	154608203	-	transcript9472.chr1.nic@ADAR	transcript9472.chr1.nic	protein_coding	154607992,154600480	154608203,154602626	Gene ID= ENSG00000160710.15 TPM= 3.5 Transcript Type= NA
chr1	154582062	154608206	154582062	154608206	-	ENST00000368474.8@ADAR	ENST00000368474.8	protein_coding	154607992,154601041,154598402,154597828,154597123,154596805,154590184,154589757,154589369,154588551,154588125,154586181,154585753,154585217,154582062	154608206,154602626,154598585,154597976,154597267,154596995,154590409,154589928,154589462,154588673,154588258,154586363,154585865,154585344,154585043	Gene ID= ENSG00000160710.15 TPM= 57.04 Transcript Type= protein_coding
chr1	154697455	154870280	154697455	154870280	-	ENST00000271915.8@KCNN3	ENST00000271915.8	protein_coding	154869032,154822089,154771975,154733003,154725916,154714876,154713464,154697455	154870280,154822184,154772393,154733144,154726026,154715003,154713533,154708272	Gene ID= ENSG00000143603.18 TPM= 3.5 Transcript Type= protein_coding
chr1	154924734	154936991	154924734	154936991	-	ENST00000368467.3@PMVK	ENST00000368467.3	protein_coding	154936591,154932352,154929024,154926354,154924734	154936991,154932415,154929176,154926483,154925265	Gene ID= ENSG00000163344.5 TPM= 119.09 Transcript Type= protein_coding
chr1	154944080	154956104	154944080	154956104	-	ENST00000368463.7@PBXIP1	ENST00000368463.7	protein_coding	154956069,154953671,154951795,154951471,154951232,154948133,154947982,154947642,154947417,154945572,154944080	154956104,154953757,154951921,154951535,154951397,154948366,154948005,154947712,154947548,154946803,154945117	Gene ID= ENSG00000163346.16 TPM= 123.27 Transcript Type= protein_coding
chr1	154944076	154956121	154944076	154956121	-	ENST00000368465.5@PBXIP1	ENST00000368465.5	protein_coding	154956069,154951795,154951471,154951232,154948133,154947982,154947642,154947417,154945572,154944076	154956121,154951919,154951535,154951397,154948366,154948005,154947712,154947548,154946803,154945117	Gene ID= ENSG00000163346.16 TPM= 24.03 Transcript Type= protein_coding
chr1	154957026	154962454	154957026	154962454	-	transcript9524.chr1.nic@PYGO2	transcript9524.chr1.nic	protein_coding	154960977,154957026	154962454,154959846	Gene ID= ENSG00000163348.3 TPM= 4.67 Transcript Type= NA
chr1	154957026	154961748	154957026	154961748	-	ENST00000368457.2@PYGO2	ENST00000368457.2	protein_coding	154961474,154960977,154957026	154961748,154961026,154959846	Gene ID= ENSG00000163348.3 TPM= 54.88 Transcript Type= protein_coding
chr1	154961825	154962623	154961825	154962623	+	ENST00000605085.1@AL451085.2	ENST00000605085.1	antisense_RNA	154961825	154962623	Gene ID= ENSG00000271380.1 TPM= 4.67 Transcript Type= antisense_RNA
chr1	154962298	154974376	154962298	154974376	-	ENST00000368450.5@SHC1	ENST00000368450.5	protein_coding	154974248,154970032,154969378,154968771,154968495,154968204,154967980,154967671,154966319,154966162,154965946,154965543,154962298	154974376,154970199,154969448,154968834,154968614,154968257,154968031,154967797,154966517,154966231,154966077,154965781,154963931	Gene ID= ENSG00000160691.18 TPM= 31.91 Transcript Type= protein_coding
chr1	154962298	154974376	154962298	154974376	-	ENST00000368453.8@SHC1	ENST00000368453.8	protein_coding	154974248,154970032,154969378,154968771,154968495,154968204,154967980,154967671,154966319,154966162,154965946,154965543,154962298	154974376,154970199,154969448,154968834,154968614,154968257,154968031,154967797,154966517,154966231,154966080,154965781,154963931	Gene ID= ENSG00000160691.18 TPM= 46.7 Transcript Type= protein_coding
chr1	154962298	154970747	154962298	154970747	-	ENST00000448116.6@SHC1	ENST00000448116.6	protein_coding	154970032,154969378,154968771,154968495,154968204,154967980,154967671,154966319,154966162,154965946,154965543,154962298	154970747,154969448,154968834,154968614,154968257,154968031,154967797,154966517,154966231,154966080,154965781,154963931	Gene ID= ENSG00000160691.18 TPM= 57.99 Transcript Type= protein_coding
chr1	154962298	154970741	154962298	154970741	-	ENST00000368445.9@SHC1	ENST00000368445.9	protein_coding	154970032,154969378,154968771,154968495,154968204,154967980,154967671,154966319,154966162,154965946,154965543,154962298	154970741,154969448,154968834,154968614,154968257,154968031,154967797,154966517,154966231,154966077,154965781,154963931	Gene ID= ENSG00000160691.18 TPM= 41.25 Transcript Type= protein_coding
chr1	154974699	154979249	154974699	154979249	+	ENST00000308987.5@CKS1B	ENST00000308987.5	protein_coding	154974699,154977987,154978725	154974804,154978114,154979249	Gene ID= ENSG00000173207.12 TPM= 25.69 Transcript Type= protein_coding
chr1	154983333	154993111	154983333	154993111	+	transcript9528.chr1.nic@FLAD1	transcript9528.chr1.nic	protein_coding	154983333,154983842,154988105,154989560,154990159,154992713,154992902	154983397,154984066,154988849,154989707,154990528,154992786,154993111	Gene ID= ENSG00000160688.18 TPM= 2.92 Transcript Type= NA
chr1	154983333	154989009	154983333	154989009	+	transcript9530.chr1.nic@FLAD1	transcript9530.chr1.nic	protein_coding	154983333,154983842,154988105	154983397,154984066,154989009	Gene ID= ENSG00000160688.18 TPM= 3.5 Transcript Type= NA
chr1	154983359	154993111	154983359	154993111	+	ENST00000315144.14@FLAD1	ENST00000315144.14	protein_coding	154983359,154983842,154988105,154989560,154990159,154990339,154992713,154992902	154983397,154984066,154988849,154989707,154990257,154990528,154992786,154993111	Gene ID= ENSG00000160688.18 TPM= 21.6 Transcript Type= protein_coding
chr1	155002602	155018522	155002602	155018522	+	transcript9532.chr1.nnic@ZBTB7B	transcript9532.chr1.nnic	protein_coding	155002602,155002843,155010258,155010916,155014015,155014655,155016220	155002669,155002943,155010397,155011015,155014093,155015814,155018522	Gene ID= ENSG00000160685.13 TPM= 13.72 Transcript Type= NA
chr1	155002602	155018522	155002602	155018522	+	transcript9535.chr1.nnic@ZBTB7B	transcript9535.chr1.nnic	protein_coding	155002602,155002843,155014655,155016220	155002669,155002943,155015814,155018522	Gene ID= ENSG00000160685.13 TPM= 15.27 Transcript Type= NA
chr1	155002630	155018522	155002630	155018522	+	ENST00000535420.5@ZBTB7B	ENST00000535420.5	protein_coding	155002630,155014655,155016220	155002943,155015814,155018522	Gene ID= ENSG00000160685.13 TPM= 15.27 Transcript Type= protein_coding
chr1	155002657	155018522	155002657	155018522	+	ENST00000368426.3@ZBTB7B	ENST00000368426.3	protein_coding	155002657,155002843,155014655,155016220	155002686,155002943,155015814,155018522	Gene ID= ENSG00000160685.13 TPM= 21.11 Transcript Type= protein_coding
chr1	155051282	155062775	155051282	155062775	+	transcript9554.chr1.nic@ADAM15	transcript9554.chr1.nic	protein_coding	155051282,155052671,155053417,155053910,155054150,155054314,155055790,155055932,155056080,155056386,155056953,155057188,155057637,155057851,155058246,155058710,155059902,155060205,155060763,155062460	155051465,155052777,155053493,155053988,155054226,155054506,155055852,155056000,155056249,155056470,155057101,155057362,155057729,155058155,155058441,155058787,155059974,155060343,155062369,155062775	Gene ID= ENSG00000143537.13 TPM= 14.84 Transcript Type= NA
chr1	155051286	155062758	155051286	155062758	+	ENST00000360674.8@ADAM15	ENST00000360674.8	protein_coding	155051286,155052671,155053417,155053910,155054150,155054314,155055790,155055932,155056080,155056386,155056953,155057188,155057637,155057851,155058246,155058710,155059902,155060205,155062245,155062460	155051465,155052777,155053493,155053988,155054226,155054506,155055852,155056000,155056249,155056470,155057101,155057362,155057729,155058155,155058441,155058787,155059974,155060343,155062369,155062758	Gene ID= ENSG00000143537.13 TPM= 94.94 Transcript Type= protein_coding
chr1	155051306	155062775	155051306	155062775	+	ENST00000271836.10@ADAM15	ENST00000271836.10	protein_coding	155051306,155052671,155053417,155053910,155054150,155054314,155055790,155055932,155056080,155056386,155056953,155057188,155057637,155057851,155058246,155058710,155059902,155060205,155060763,155062245,155062460	155051465,155052777,155053493,155053988,155054226,155054506,155055852,155056000,155056249,155056470,155057101,155057362,155057729,155058155,155058441,155058787,155059974,155060343,155060832,155062369,155062775	Gene ID= ENSG00000143537.13 TPM= 120.89 Transcript Type= protein_coding
chr1	155051286	155062758	155051286	155062758	+	ENST00000449910.6@ADAM15	ENST00000449910.6	protein_coding	155051286,155052671,155053417,155053910,155054150,155054314,155055790,155055932,155056080,155056386,155056953,155057188,155057637,155057851,155058246,155058710,155059902,155060205,155060763,155061418,155061904,155062245,155062460	155051465,155052777,155053493,155053988,155054226,155054506,155055852,155056000,155056249,155056470,155057101,155057362,155057729,155058155,155058441,155058787,155059974,155060343,155060832,155061489,155061975,155062369,155062758	Gene ID= ENSG00000143537.13 TPM= 2.7 Transcript Type= protein_coding
chr1	155051286	155062758	155051286	155062758	+	ENST00000355956.6@ADAM15	ENST00000355956.6	protein_coding	155051286,155052671,155053417,155053910,155054150,155054314,155055790,155055932,155056080,155056386,155056953,155057188,155057637,155057851,155058246,155058710,155059902,155060205,155060763,155061415,155062245,155062460	155051465,155052777,155053493,155053988,155054226,155054506,155055852,155056000,155056249,155056470,155057101,155057362,155057729,155058155,155058441,155058787,155059974,155060343,155060832,155061489,155062369,155062758	Gene ID= ENSG00000143537.13 TPM= 8.54 Transcript Type= protein_coding
chr1	155051286	155062758	155051286	155062758	+	ENST00000526491.5@ADAM15	ENST00000526491.5	protein_coding	155051286,155052671,155053417,155053910,155054150,155054314,155055790,155055932,155056080,155056386,155056953,155057188,155057637,155057851,155058246,155058710,155059902,155060205,155060763,155061415,155061904,155062245,155062460	155051465,155052777,155053493,155053988,155054226,155054506,155055852,155056000,155056249,155056470,155057101,155057362,155057729,155058155,155058441,155058787,155059974,155060343,155060832,155061489,155062117,155062369,155062758	Gene ID= ENSG00000143537.13 TPM= 3.86 Transcript Type= nonsense_mediated_decay
chr1	155058710	155062775	155058710	155062775	+	ENST00000474709.5@ADAM15	ENST00000474709.5	protein_coding	155058710,155059902,155060205,155062245,155062460	155058787,155059974,155060343,155062369,155062775	Gene ID= ENSG00000143537.13 TPM= 3.97 Transcript Type= processed_transcript
chr1	155063731	155069553	155063731	155069553	+	ENST00000368409.7@EFNA4	ENST00000368409.7	protein_coding	155063731,155066730,155067372,155068853	155063936,155067016,155067440,155069553	Gene ID= ENSG00000243364.7 TPM= 10.51 Transcript Type= protein_coding
chr1	155127460	155134857	155127460	155134857	+	ENST00000368407.7@EFNA1	ENST00000368407.7	protein_coding	155127460,155131339,155133503,155133730,155133955	155128069,155131634,155133568,155133780,155134857	Gene ID= ENSG00000169242.11 TPM= 329.65 Transcript Type= protein_coding
chr1	155127876	155134857	155127876	155134857	+	ENST00000368406.2@EFNA1	ENST00000368406.2	protein_coding	155127876,155131339,155133730,155133955	155128069,155131634,155133780,155134857	Gene ID= ENSG00000169242.11 TPM= 41.25 Transcript Type= protein_coding
chr1	155135336	155138851	155135336	155138851	+	transcript9589.chr1.nic@SLC50A1	transcript9589.chr1.nic	protein_coding	155135336,155136299,155136828,155137561,155137979,155138180	155135680,155136376,155136951,155137722,155138098,155138851	Gene ID= ENSG00000169241.17 TPM= 6.56 Transcript Type= NA
chr1	155135847	155138855	155135847	155138855	+	transcript9590.chr1.nic@SLC50A1	transcript9590.chr1.nic	protein_coding	155135847,155136299,155136828,155137561,155137979,155138162	155135991,155136376,155136951,155137722,155138098,155138855	Gene ID= ENSG00000169241.17 TPM= 3.84 Transcript Type= NA
chr1	155135812	155138851	155135812	155138851	+	transcript9592.chr1.nnic@SLC50A1	transcript9592.chr1.nnic	protein_coding	155135812,155136299,155136828,155137561,155137979,155138180	155135972,155136376,155136951,155137722,155138098,155138851	Gene ID= ENSG00000169241.17 TPM= 3.06 Transcript Type= NA
chr1	155135850	155138853	155135850	155138853	+	ENST00000368404.8@SLC50A1	ENST00000368404.8	protein_coding	155135850,155136299,155136828,155137561,155137979,155138180	155135991,155136376,155136951,155137722,155138098,155138853	Gene ID= ENSG00000169241.17 TPM= 22.91 Transcript Type= protein_coding
chr1	155135867	155138851	155135867	155138851	+	transcript9597.chr1.nic@SLC50A1	transcript9597.chr1.nic	protein_coding	155135867,155137561,155137979,155138180	155136376,155137722,155138098,155138851	Gene ID= ENSG00000169241.17 TPM= 2.67 Transcript Type= NA
chr1	155135858	155138851	155135858	155138851	+	ENST00000368401.5@SLC50A1	ENST00000368401.5	protein_coding	155135858,155136299,155137561,155137979,155138180	155135991,155136376,155137722,155138098,155138851	Gene ID= ENSG00000169241.17 TPM= 6.18 Transcript Type= protein_coding
chr1	155135850	155138852	155135850	155138852	+	ENST00000303343.12@SLC50A1	ENST00000303343.12	protein_coding	155135850,155136299,155136828,155137979,155138180	155135991,155136376,155136951,155138098,155138852	Gene ID= ENSG00000169241.17 TPM= 2.67 Transcript Type= protein_coding
chr1	155139891	155140544	155139891	155140544	-	ENST00000368400.4@DPM3	ENST00000368400.4	protein_coding	155140491,155139891	155140544,155140245	Gene ID= ENSG00000179085.7 TPM= 23.94 Transcript Type= protein_coding
chr1	155139891	155140595	155139891	155140595	-	ENST00000341298.3@DPM3	ENST00000341298.3	protein_coding	155140491,155139891	155140595,155140271	Gene ID= ENSG00000179085.7 TPM= 11.09 Transcript Type= protein_coding
chr1	155169408	155178900	155169408	155178900	-	transcript9603.chr1.nnic@KRTCAP2	transcript9603.chr1.nnic	protein_coding	155178772,155173317,155172738,155172565,155169791,155169408	155178900,155173474,155172892,155172628,155169857,155169560	Gene ID= ENSG00000163463.11 TPM= 26.56 Transcript Type= NA
chr1	155169408	155173333	155169408	155173333	-	ENST00000295682.4@KRTCAP2	ENST00000295682.4	protein_coding	155173221,155172738,155172565,155169791,155169408	155173333,155172892,155172628,155169857,155169560	Gene ID= ENSG00000163463.11 TPM= 87.28 Transcript Type= protein_coding
chr1	155169408	155173238	155169408	155173238	-	ENST00000487350.5@KRTCAP2	ENST00000487350.5	protein_coding	155172738,155172565,155169791,155169408	155173238,155172628,155169857,155169560	Gene ID= ENSG00000163463.11 TPM= 19.56 Transcript Type= processed_transcript
chr1	155169408	155173475	155169408	155173475	-	ENST00000491084.5@KRTCAP2	ENST00000491084.5	protein_coding	155173317,155172738,155172565,155169791,155169408	155173475,155172892,155172628,155169857,155169560	Gene ID= ENSG00000163463.11 TPM= 17.22 Transcript Type= processed_transcript
chr1	155185824	155192910	155185824	155192910	-	transcript9636.chr1.nic@MUC1	transcript9636.chr1.nic	protein_coding	155192786,155192183,155188163,155188008,155187722,155187455,155187225,155185824	155192910,155192310,155188285,155188063,155187858,155187576,155187374,155186209	Gene ID= ENSG00000185499.16 TPM= 22.21 Transcript Type= NA
chr1	155185824	155189767	155185824	155189767	-	transcript9687.chr1.nnic@MUC1	transcript9687.chr1.nnic	protein_coding	155189240,155188163,155188008,155187722,155187455,155187225,155185824	155189767,155189055,155188063,155187858,155187576,155187374,155186209	Gene ID= ENSG00000185499.16 TPM= 94.59 Transcript Type= NA
chr1	155195588	155209173	155195588	155209173	-	transcript9612.chr1.nic@THBS3	transcript9612.chr1.nic	protein_coding	155208906,155206200,155205060,155204855,155203513,155203223,155203086,155202812,155202261,155201957,155201417,155201094,155200897,155200451,155199995,155199804,155198409,155198042,155197880,155197463,155197041,155195987,155195588	155209173,155206406,155205316,155204957,155203539,155203305,155203137,155202960,155202401,155202034,155201569,155201204,155201004,155200610,155200113,155199856,155198602,155198220,155197928,155197659,155197213,155196126,155195899	Gene ID= ENSG00000169231.13 TPM= 3.89 Transcript Type= NA
chr1	155195588	155206462	155195588	155206462	-	transcript9614.chr1.nic@THBS3	transcript9614.chr1.nic	protein_coding	155205060,155204855,155203513,155203223,155203086,155202812,155202261,155201957,155201417,155201094,155200897,155200451,155199995,155199804,155198409,155198042,155197880,155197463,155197041,155195987,155195588	155206462,155204957,155203539,155203305,155203137,155202960,155202401,155202034,155201569,155201204,155201004,155200610,155200113,155199856,155198602,155198220,155197928,155197659,155197213,155196126,155195899	Gene ID= ENSG00000169231.13 TPM= 2.72 Transcript Type= NA
chr1	155195588	155207897	155195588	155207897	-	ENST00000368378.7@THBS3	ENST00000368378.7	protein_coding	155207798,155206200,155205060,155204855,155203513,155203223,155203086,155202812,155202261,155201957,155201417,155201094,155200897,155200451,155199995,155199804,155198409,155198042,155197880,155197463,155197041,155195987,155195588	155207897,155206406,155205316,155204957,155203539,155203305,155203137,155202960,155202401,155202034,155201569,155201204,155201004,155200610,155200113,155199856,155198602,155198220,155197928,155197659,155197213,155196126,155195899	Gene ID= ENSG00000169231.13 TPM= 7.39 Transcript Type= protein_coding
chr1	155209246	155213823	155209246	155213823	+	transcript9629.chr1.nnic@MTX1	transcript9629.chr1.nnic	protein_coding	155209246,155210346,155210548,155212079,155212385,155212694,155213237,155213484	155209332,155210415,155210627,155212219,155212567,155212770,155213391,155213823	Gene ID= ENSG00000173171.14 TPM= 2.34 Transcript Type= NA
chr1	155208699	155213823	155208699	155213823	+	ENST00000368376.7@MTX1	ENST00000368376.7	protein_coding	155208699,155210346,155210548,155212127,155212385,155212694,155213237,155213484	155209332,155210415,155210627,155212219,155212567,155212770,155213391,155213823	Gene ID= ENSG00000173171.14 TPM= 42.03 Transcript Type= protein_coding
chr1	155209251	155213823	155209251	155213823	+	ENST00000481771.5@MTX1	ENST00000481771.5	protein_coding	155209251,155210346,155210548,155212385,155212694,155213237,155213484	155209332,155210415,155212219,155212567,155212770,155213391,155213823	Gene ID= ENSG00000173171.14 TPM= 4.67 Transcript Type= retained_intron
chr1	155209247	155213824	155209247	155213824	+	ENST00000609421.1@MTX1	ENST00000609421.1	protein_coding	155209247,155210346,155210548,155212127,155212385,155212694,155213237,155213484	155209332,155210415,155210627,155212219,155212567,155212770,155213391,155213824	Gene ID= ENSG00000173171.14 TPM= 10.51 Transcript Type= protein_coding
chr1	155234452	155244670	155234452	155244670	-	ENST00000327247.9@GBA	ENST00000327247.9	protein_coding	155244506,155241086,155240630,155239886,155239616,155238517,155238134,155237341,155236245,155235681,155235195,155234452	155244670,155241180,155240717,155240077,155239762,155238650,155238306,155237578,155236469,155235844,155235311,155235100	Gene ID= ENSG00000177628.15 TPM= 27.44 Transcript Type= protein_coding
chr1	155234452	155241234	155234452	155241234	-	ENST00000368373.7@GBA	ENST00000368373.7	protein_coding	155241086,155240630,155239886,155239616,155238517,155238134,155237341,155236245,155235681,155235195,155234452	155241234,155240717,155240077,155239762,155238650,155238306,155237578,155236469,155235844,155235311,155235100	Gene ID= ENSG00000177628.15 TPM= 41.45 Transcript Type= protein_coding
chr1	155247217	155255387	155247217	155255387	-	ENST00000361361.6@FAM189B	ENST00000361361.6	protein_coding	155254653,155254400,155254084,155253859,155253625,155251733,155251502,155251095,155250276,155248405,155248050,155247217	155255387,155254456,155254194,155253978,155253732,155251905,155251601,155251164,155250821,155248473,155248303,155247955	Gene ID= ENSG00000160767.20 TPM= 18.68 Transcript Type= protein_coding
chr1	155255981	155262403	155255981	155262403	-	transcript9717.chr1.nnic@SCAMP3	transcript9717.chr1.nnic	protein_coding	155262086,155261657,155260537,155260330,155258826,155257498,155257285,155256674,155255981	155262403,155261734,155260659,155260450,155258912,155257657,155257386,155256791,155256419	Gene ID= ENSG00000116521.10 TPM= 9.81 Transcript Type= NA
chr1	155255981	155262430	155255981	155262430	-	ENST00000355379.3@SCAMP3	ENST00000355379.3	protein_coding	155262086,155260537,155260330,155258826,155257498,155257285,155256674,155255981	155262430,155260659,155260450,155258954,155257657,155257386,155256791,155256419	Gene ID= ENSG00000116521.10 TPM= 19.35 Transcript Type= protein_coding
chr1	155255979	155262259	155255979	155262259	-	ENST00000302631.7@SCAMP3	ENST00000302631.7	protein_coding	155262086,155261657,155260537,155260330,155258826,155257498,155257285,155256674,155255979	155262259,155261734,155260659,155260450,155258954,155257657,155257386,155256791,155256419	Gene ID= ENSG00000116521.10 TPM= 68.5 Transcript Type= protein_coding
chr1	155262874	155273528	155262874	155273528	-	transcript9729.chr1.nnic@CLK2	transcript9729.chr1.nnic	protein_coding	155273201,155270808,155269488,155268708,155268293,155268010,155266729,155265860,155264645,155264468,155264221,155263950,155263573,155262874	155273528,155270977,155269716,155268795,155268359,155268126,155266895,155265954,155264774,155264550,155264300,155264040,155263708,155263400	Gene ID= ENSG00000176444.18 TPM= 4.9 Transcript Type= NA
chr1	155262868	155273528	155262868	155273528	-	transcript9733.chr1.nic@CLK2	transcript9733.chr1.nic	protein_coding	155273201,155270808,155268708,155268293,155268010,155266729,155265860,155264645,155264468,155264221,155263950,155262868	155273528,155270977,155269716,155268359,155268126,155266895,155265954,155264774,155264550,155264300,155264040,155263400	Gene ID= ENSG00000176444.18 TPM= 7.04 Transcript Type= NA
chr1	155262874	155273528	155262874	155273528	-	transcript9736.chr1.nnic@CLK2	transcript9736.chr1.nnic	protein_coding	155273201,155270808,155268293,155268010,155266729,155265860,155264645,155264468,155264221,155263950,155263573,155262874	155273528,155270977,155269716,155268126,155266895,155265954,155264774,155264550,155264300,155264040,155263708,155263400	Gene ID= ENSG00000176444.18 TPM= 3.5 Transcript Type= NA
chr1	155262868	155273528	155262868	155273528	-	transcript9739.chr1.nic@CLK2	transcript9739.chr1.nic	protein_coding	155273201,155270808,155268293,155268010,155266729,155265860,155264645,155264468,155264221,155263950,155262868	155273528,155270977,155269716,155268126,155266895,155265954,155264774,155264550,155264300,155264040,155263400	Gene ID= ENSG00000176444.18 TPM= 21.05 Transcript Type= NA
chr1	155262874	155273482	155262874	155273482	-	ENST00000355560.4@CLK2	ENST00000355560.4	protein_coding	155273201,155270808,155269488,155268708,155268293,155268010,155266729,155265860,155264645,155264468,155264221,155263950,155262874	155273482,155270977,155269713,155268792,155268359,155268126,155266895,155265954,155264774,155264550,155264300,155264040,155263400	Gene ID= ENSG00000176444.18 TPM= 3.74 Transcript Type= protein_coding
chr1	155277699	155289847	155277699	155289847	+	ENST00000496230.5@HCN3	ENST00000496230.5	protein_coding	155277699,155282411,155283974,155285165,155285724,155287249,155287781,155289391	155277868,155282840,155284757,155285311,155285964,155287337,155288707,155289847	Gene ID= ENSG00000143630.9 TPM= 2.34 Transcript Type= processed_transcript
chr1	155308916	155320665	155308916	155320665	+	ENST00000356657.10@FDPS	ENST00000356657.10	protein_coding	155308916,155309789,155310043,155312255,155317941,155318169,155318665,155318856,155319611,155319794,155320409	155309076,155309965,155310205,155312395,155318021,155318291,155318753,155318928,155319688,155319928,155320665	Gene ID= ENSG00000160752.14 TPM= 6.38 Transcript Type= protein_coding
chr1	155308748	155320666	155308748	155320666	+	ENST00000611010.4@FDPS	ENST00000611010.4	protein_coding	155308748,155312255,155317941,155318169,155318665,155318856,155319611,155319794,155320409	155308965,155312395,155318021,155318291,155318753,155318928,155319688,155319928,155320666	Gene ID= ENSG00000160752.14 TPM= 2.84 Transcript Type= protein_coding
chr1	155308852	155320665	155308852	155320665	+	ENST00000368356.8@FDPS	ENST00000368356.8	protein_coding	155308852,155309789,155310043,155312255,155317941,155318169,155318665,155318856,155319611,155319794,155320409	155308965,155309965,155310205,155312395,155318021,155318291,155318753,155318928,155319688,155319928,155320665	Gene ID= ENSG00000160752.14 TPM= 19.22 Transcript Type= protein_coding
chr1	155308889	155320647	155308889	155320647	+	ENST00000467076.5@FDPS	ENST00000467076.5	protein_coding	155308889,155310064,155312255,155317941,155318169,155318665,155318856,155319611,155319794,155320409	155308965,155310205,155312395,155318021,155318291,155318753,155318928,155319688,155319928,155320647	Gene ID= ENSG00000160752.14 TPM= 131.94 Transcript Type= protein_coding
chr1	155308970	155320637	155308970	155320637	+	ENST00000612683.1@FDPS	ENST00000612683.1	protein_coding	155308970,155310064,155312255,155317941,155318169,155318665,155318856,155319611,155319794,155320409	155309076,155310205,155312395,155318021,155318291,155318753,155318928,155319688,155319928,155320637	Gene ID= ENSG00000160752.14 TPM= 10.51 Transcript Type= protein_coding
chr1	155308852	155310973	155308852	155310973	+	transcript9804.chr1.nnic@NA	transcript9804.chr1.nnic	NA	155308852	155310973	Gene ID= novel_gene_chr1_9805 TPM= 9.34 Transcript Type= NA
chr1	155320924	155331114	155320924	155331114	+	transcript9758.chr1.nnic@RUSC1	transcript9758.chr1.nnic	protein_coding	155320924,155321688,155323402,155324845,155325102,155325316,155325567,155325864,155326580,155328150,155330403	155320991,155323130,155323812,155324943,155325178,155325490,155325672,155325910,155327132,155328275,155331114	Gene ID= ENSG00000160753.15 TPM= 4.36 Transcript Type= NA
chr1	155320927	155331114	155320927	155331114	+	ENST00000368352.9@RUSC1	ENST00000368352.9	protein_coding	155320927,155321688,155324845,155325102,155325316,155325567,155325864,155326580,155328150,155330403	155320991,155323130,155324943,155325178,155325490,155325672,155325910,155327132,155328275,155331114	Gene ID= ENSG00000160753.15 TPM= 3.19 Transcript Type= protein_coding
chr1	155323463	155331114	155323463	155331114	+	transcript9771.chr1.nic@RUSC1	transcript9771.chr1.nic	protein_coding	155323463,155324845,155325102,155325316,155325567,155325864,155326580,155328150,155330403	155323727,155324943,155325178,155325490,155325672,155325910,155327132,155328275,155331114	Gene ID= ENSG00000160753.15 TPM= 3.19 Transcript Type= NA
chr1	155323937	155331114	155323937	155331114	+	ENST00000368347.8@RUSC1	ENST00000368347.8	protein_coding	155323937,155324845,155325102,155325316,155325567,155325864,155326580,155328150,155330403	155324544,155324943,155325178,155325490,155325672,155325910,155327132,155328275,155331114	Gene ID= ENSG00000160753.15 TPM= 5.52 Transcript Type= protein_coding
chr1	155324514	155330729	155324514	155330729	+	transcript9776.chr1.nic@RUSC1	transcript9776.chr1.nic	protein_coding	155324514,155324845,155325102,155325316,155325567,155325864,155326898,155328150,155330403	155324544,155324943,155325178,155325490,155325672,155325910,155327132,155328275,155330729	Gene ID= ENSG00000160753.15 TPM= 2.34 Transcript Type= NA
chr1	155324447	155331114	155324447	155331114	+	transcript9790.chr1.nic@RUSC1	transcript9790.chr1.nic	protein_coding	155324447,155324845,155325102,155325316,155325864,155326580,155328150,155330403	155324587,155324943,155325178,155325672,155325910,155327132,155328275,155331114	Gene ID= ENSG00000160753.15 TPM= 2.79 Transcript Type= NA
chr1	155324513	155331112	155324513	155331112	+	ENST00000368349.8@RUSC1	ENST00000368349.8	protein_coding	155324513,155324845,155325102,155325316,155325567,155325864,155326580,155328150,155330403	155324587,155324943,155325178,155325490,155325672,155325910,155327132,155328275,155331112	Gene ID= ENSG00000160753.15 TPM= 6.52 Transcript Type= protein_coding
chr1	155324539	155331114	155324539	155331114	+	ENST00000471876.5@RUSC1	ENST00000471876.5	protein_coding	155324539,155325102,155325316,155325567,155325864,155326898,155328150,155330403	155324809,155325178,155325490,155325672,155325910,155327132,155328275,155331114	Gene ID= ENSG00000160753.15 TPM= 6.29 Transcript Type= protein_coding
chr1	155324577	155331114	155324577	155331114	+	ENST00000292254.8@RUSC1	ENST00000292254.8	protein_coding	155324577,155325102,155325316,155325567,155325864,155326580,155328150,155330403	155324943,155325178,155325490,155325672,155325910,155327132,155328275,155331114	Gene ID= ENSG00000160753.15 TPM= 2.02 Transcript Type= protein_coding
chr1	155480736	155562823	155480736	155562823	-	transcript9807.chr1.nic@ASH1L	transcript9807.chr1.nic	protein_coding	155562779,155562153,155521100,155480736	155562823,155562295,155521618,155482449	Gene ID= ENSG00000116539.12 TPM= 7.59 Transcript Type= NA
chr1	155480736	155562806	155480736	155562806	-	transcript9812.chr1.nnic@ASH1L	transcript9812.chr1.nnic	protein_coding	155562779,155521100,155480736	155562806,155521618,155482449	Gene ID= ENSG00000116539.12 TPM= 4.09 Transcript Type= NA
chr1	155610225	155614967	155610225	155614967	+	ENST00000245564.6@MSTO1	ENST00000245564.6	protein_coding	155610225,155610425,155611039,155611216,155611549,155611689,155611983,155612182,155612418,155612844,155613049,155613462,155613657,155614059	155610332,155610560,155611108,155611291,155611603,155611827,155612100,155612316,155612570,155612975,155613233,155613566,155613766,155614967	Gene ID= ENSG00000125459.14 TPM= 7.01 Transcript Type= protein_coding
chr1	155626755	155637604	155626755	155637604	-	transcript9872.chr1.nnic@AL353807.3	transcript9872.chr1.nnic	unprocessed_pseudogene	155637394,155634770,155626755	155637604,155634846,155627727	Gene ID= ENSG00000246203.2 TPM= 7.01 Transcript Type= NA
chr1	155659446	155688987	155659446	155688987	-	transcript9847.chr1.nic@YY1AP1	transcript9847.chr1.nic	protein_coding	155688930,155688071,155680416,155679409,155676548,155675010,155672560,155670320,155668627,155661307,155659446	155688987,155688201,155680456,155679512,155676746,155675096,155672731,155670464,155668777,155661423,155660913	Gene ID= ENSG00000163374.19 TPM= 8.04 Transcript Type= NA
chr1	155659446	155688774	155659446	155688774	-	transcript9851.chr1.nic@YY1AP1	transcript9851.chr1.nic	protein_coding	155688659,155688071,155679409,155676548,155675010,155672560,155670320,155668627,155661307,155659446	155688774,155688201,155679512,155676746,155675096,155672731,155670464,155668717,155661423,155660913	Gene ID= ENSG00000163374.19 TPM= 4.06 Transcript Type= NA
chr1	155659446	155688698	155659446	155688698	-	ENST00000347088.9@YY1AP1	ENST00000347088.9	protein_coding	155688659,155680416,155679409,155676548,155675010,155672560,155670320,155668627,155661307,155659446	155688698,155680456,155679512,155676746,155675096,155672731,155670464,155668777,155661423,155660913	Gene ID= ENSG00000163374.19 TPM= 5.13 Transcript Type= protein_coding
chr1	155659446	155688774	155659446	155688774	-	ENST00000359205.9@YY1AP1	ENST00000359205.9	protein_coding	155688659,155688071,155679409,155676548,155675010,155672560,155670320,155668627,155661307,155659446	155688774,155688201,155679512,155676746,155675096,155672731,155670464,155668777,155661423,155660913	Gene ID= ENSG00000163374.19 TPM= 3.96 Transcript Type= protein_coding
chr1	155659454	155688774	155659454	155688774	-	transcript9857.chr1.nic@YY1AP1	transcript9857.chr1.nic	protein_coding	155688659,155688071,155680416,155679409,155676548,155675010,155672560,155670320,155668627,155659454	155688774,155688201,155680456,155679512,155676746,155675096,155672731,155670464,155668717,155661423	Gene ID= ENSG00000163374.19 TPM= 6.22 Transcript Type= NA
chr1	155671739	155688774	155671739	155688774	-	transcript9865.chr1.nic@YY1AP1	transcript9865.chr1.nic	protein_coding	155688659,155688071,155680416,155679409,155676548,155675010,155671739	155688774,155688201,155680456,155679512,155676746,155675096,155672731	Gene ID= ENSG00000163374.19 TPM= 2.34 Transcript Type= NA
chr1	155659446	155688748	155659446	155688748	-	ENST00000361140.8@YY1AP1	ENST00000361140.8	protein_coding	155688659,155688071,155680416,155679409,155676548,155675010,155672560,155670320,155668627,155661307,155659446	155688748,155688201,155680456,155679512,155676746,155675096,155672727,155670464,155668777,155661423,155660913	Gene ID= ENSG00000163374.19 TPM= 17.2 Transcript Type= nonsense_mediated_decay
chr1	155659446	155688757	155659446	155688757	-	ENST00000404643.5@YY1AP1	ENST00000404643.5	protein_coding	155688659,155688071,155680416,155679409,155676548,155675010,155672560,155670320,155668627,155661307,155659446	155688757,155688201,155680456,155679512,155676746,155675096,155672731,155670464,155668717,155661423,155660913	Gene ID= ENSG00000163374.19 TPM= 22.16 Transcript Type= protein_coding
chr1	155659443	155688656	155659443	155688656	-	ENST00000368339.9@YY1AP1	ENST00000368339.9	protein_coding	155688071,155680416,155679409,155676548,155675010,155672560,155670320,155668627,155661307,155659443	155688656,155680456,155679512,155676746,155675096,155672731,155670464,155668777,155661423,155660913	Gene ID= ENSG00000163374.19 TPM= 4.47 Transcript Type= protein_coding
chr1	155659446	155689000	155659446	155689000	-	ENST00000295566.8@YY1AP1	ENST00000295566.8	protein_coding	155688930,155688071,155680416,155679409,155676548,155675010,155672560,155670320,155668627,155661307,155659446	155689000,155688201,155680456,155679512,155676746,155675096,155672731,155670464,155668717,155661423,155660913	Gene ID= ENSG00000163374.19 TPM= 3.48 Transcript Type= protein_coding
chr1	155687947	155738529	155687947	155738529	+	transcript9823.chr1.nic@DAP3	transcript9823.chr1.nic	protein_coding	155687947,155689095,155709773,155717006,155721517,155725382,155725927,155727608,155729042,155729208,155731356,155731944,155736946,155738157	155688192,155689174,155709824,155717128,155721618,155725490,155726019,155727738,155729122,155729366,155731415,155732033,155737063,155738529	Gene ID= ENSG00000132676.15 TPM= 2.72 Transcript Type= NA
chr1	155689083	155738526	155689083	155738526	+	ENST00000343043.7@DAP3	ENST00000343043.7	protein_coding	155689083,155709773,155717006,155721517,155725382,155725927,155727608,155729042,155729208,155731356,155731944,155736946,155738157	155689243,155709824,155717128,155721618,155725490,155726019,155727738,155729122,155729366,155731415,155732033,155737063,155738526	Gene ID= ENSG00000132676.15 TPM= 14.4 Transcript Type= protein_coding
chr1	155689058	155739010	155689058	155739010	+	ENST00000368336.9@DAP3	ENST00000368336.9	protein_coding	155689058,155709773,155717006,155721517,155725382,155725927,155727608,155729042,155729208,155731356,155731944,155736946,155738157	155689174,155709824,155717128,155721618,155725490,155726019,155727738,155729122,155729366,155731415,155732033,155737063,155739010	Gene ID= ENSG00000132676.15 TPM= 7.39 Transcript Type= protein_coding
chr1	155764784	155857217	155764784	155857217	-	ENST00000471341.5@GON4L	ENST00000471341.5	protein_coding	155857147,155853276,155826837,155822286,155821474,155820606,155815805,155814330,155813634,155804949,155795050,155785334,155783986,155777622,155776395,155775002,155773066,155771067,155767425,155764784	155857217,155853806,155827028,155822476,155821548,155820656,155816262,155814449,155813804,155805141,155795151,155785374,155784089,155777820,155776481,155775173,155773210,155771217,155767541,155766709	Gene ID= ENSG00000116580.18 TPM= 5.84 Transcript Type= processed_transcript
chr1	155897808	155911404	155897808	155911404	-	ENST00000368323.7@RIT1	ENST00000368323.7	protein_coding	155911243,155910656,155910450,155904731,155904311,155897808	155911404,155910804,155910506,155904804,155904502,155900618	Gene ID= ENSG00000143622.10 TPM= 3.5 Transcript Type= protein_coding
chr1	155900398	155911344	155900398	155911344	-	ENST00000461050.5@RIT1	ENST00000461050.5	protein_coding	155911243,155910656,155910450,155904731,155904603,155904311,155900398	155911344,155910804,155910506,155904804,155904610,155904502,155900618	Gene ID= ENSG00000143622.10 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr1	155926326	155934410	155926326	155934410	-	transcript9896.chr1.nic@KIAA0907	transcript9896.chr1.nic	protein_coding	155934336,155933633,155929712,155929296,155926326	155934410,155933849,155929840,155929375,155927156	Gene ID= ENSG00000132680.10 TPM= 2.34 Transcript Type= NA
chr1	155913043	155934397	155913043	155934397	-	ENST00000368321.7@KIAA0907	ENST00000368321.7	protein_coding	155934336,155933633,155929712,155929296,155927104,155926676,155925632,155923627,155921861,155921375,155917499,155916625,155915873,155913043	155934397,155933849,155929840,155929375,155927156,155926839,155925843,155923687,155921918,155921628,155917672,155916737,155915964,155914320	Gene ID= ENSG00000132680.10 TPM= 7.01 Transcript Type= protein_coding
chr1	155946856	155978568	155946856	155978568	-	transcript9890.chr1.nic@ARHGEF2	transcript9890.chr1.nic	protein_coding	155978365,155969156,155966820,155966416,155965631,155965303,155964988,155962933,155962593,155962105,155961661,155958320,155957713,155954902,155952628,155952116,155951919,155951741,155951483,155950829,155950269,155946856	155978568,155969300,155966887,155966479,155965760,155965412,155965131,155963183,155962718,155962222,155961909,155958396,155957882,155954969,155952828,155952235,155951986,155951776,155951533,155951272,155950482,155948015	Gene ID= ENSG00000116584.17 TPM= 33.28 Transcript Type= NA
chr1	155968203	155978568	155968203	155978568	-	transcript9900.chr1.nic@ARHGEF2	transcript9900.chr1.nic	protein_coding	155978365,155968203	155978568,155969300	Gene ID= ENSG00000116584.17 TPM= 4.67 Transcript Type= NA
chr1	155946851	155978160	155946851	155978160	-	ENST00000313695.11@ARHGEF2	ENST00000313695.11	protein_coding	155978067,155969156,155966820,155966416,155965631,155965303,155964988,155962933,155962593,155962105,155961661,155958320,155957713,155954902,155952628,155952116,155951919,155951741,155951483,155950829,155950299,155946851	155978160,155969300,155966887,155966479,155965760,155965412,155965128,155963183,155962718,155962222,155961909,155958396,155957882,155954969,155952828,155952235,155951986,155951776,155951533,155951272,155950482,155948015	Gene ID= ENSG00000116584.17 TPM= 36.78 Transcript Type= protein_coding
chr1	156009048	156020959	156009048	156020959	-	ENST00000295702.8@SSR2	ENST00000295702.8	protein_coding	156020888,156020013,156018270,156014961,156011810,156009048	156020959,156020167,156018368,156015069,156011887,156009650	Gene ID= ENSG00000163479.13 TPM= 269.71 Transcript Type= protein_coding
chr1	156035301	156053762	156035301	156053762	-	transcript9908.chr1.nnic@UBQLN4	transcript9908.chr1.nnic	protein_coding	156053594,156051706,156051110,156050291,156048501,156043998,156042774,156042153,156041872,156041485,156035301	156053762,156051793,156051327,156050553,156048659,156044223,156042913,156042236,156041987,156041671,156037130	Gene ID= ENSG00000160803.7 TPM= 3.5 Transcript Type= NA
chr1	156035301	156053736	156035301	156053736	-	transcript9911.chr1.nnic@UBQLN4	transcript9911.chr1.nnic	protein_coding	156053594,156051706,156050291,156048501,156043998,156042774,156042153,156041872,156041485,156035301	156053736,156051857,156050553,156048659,156044223,156042913,156042236,156041987,156041671,156037130	Gene ID= ENSG00000160803.7 TPM= 2.34 Transcript Type= NA
chr1	156035301	156053794	156035301	156053794	-	ENST00000368309.3@UBQLN4	ENST00000368309.3	protein_coding	156053594,156051706,156051110,156050291,156048501,156043998,156042774,156042153,156041872,156041485,156035301	156053794,156051857,156051327,156050553,156048659,156044223,156042913,156042236,156041987,156041671,156037130	Gene ID= ENSG00000160803.7 TPM= 59.55 Transcript Type= protein_coding
chr1	156054752	156058510	156054752	156058510	+	ENST00000368305.8@LAMTOR2	ENST00000368305.8	protein_coding	156054752,156055263,156057978,156058315	156054957,156055425,156058067,156058510	Gene ID= ENSG00000116586.11 TPM= 70.64 Transcript Type= protein_coding
chr1	156055085	156058506	156055085	156058506	+	ENST00000487106.5@LAMTOR2	ENST00000487106.5	protein_coding	156055085,156057978,156058315	156055425,156058067,156058506	Gene ID= ENSG00000116586.11 TPM= 5.25 Transcript Type= processed_transcript
chr1	156061160	156070514	156061160	156070514	+	ENST00000361084.9@RAB25	ENST00000361084.9	protein_coding	156061160,156065911,156068270,156069671,156070160	156061443,156066106,156068463,156069751,156070514	Gene ID= ENSG00000132698.14 TPM= 63.05 Transcript Type= protein_coding
chr1	156114707	156140089	156114707	156140089	+	ENST00000368300.8@LMNA	ENST00000368300.8	protein_coding	156114707,156130617,156134403,156134805,156135187,156135901,156136214,156136921,156137113,156137654,156138488,156139080	156115274,156130773,156134528,156134975,156135312,156136121,156136436,156137028,156137232,156137743,156138757,156140089	Gene ID= ENSG00000160789.19 TPM= 78.81 Transcript Type= protein_coding
chr1	156138051	156140080	156138051	156140080	+	transcript9927.chr1.nnic@NA	transcript9927.chr1.nnic	NA	156138051	156140080	Gene ID= novel_gene_chr1_9928 TPM= 17.51 Transcript Type= NA
chr1	156153520	156177744	156153520	156177744	+	transcript9929.chr1.nnic@SEMA4A	transcript9929.chr1.nnic	protein_coding	156153520,156154550,156156414,156158070,156158388,156158702,156160443,156160905,156161346,156162944,156172826,156174822,156175086,156175556,156176405	156153755,156154717,156156574,156158132,156158486,156158824,156160559,156161029,156161518,156163094,156173006,156174940,156175243,156175656,156177744	Gene ID= ENSG00000196189.12 TPM= 6.13 Transcript Type= NA
chr1	156153562	156177744	156153562	156177744	+	transcript9934.chr1.nic@SEMA4A	transcript9934.chr1.nic	protein_coding	156153562,156156414,156158070,156158388,156158719,156160443,156160905,156161346,156162944,156172826,156174822,156175086,156175556,156176405	156153764,156156574,156158132,156158486,156158824,156160559,156161029,156161518,156163094,156173006,156174940,156175243,156175656,156177744	Gene ID= ENSG00000196189.12 TPM= 4.96 Transcript Type= NA
chr1	156154371	156177752	156154371	156177752	+	ENST00000368282.1@SEMA4A	ENST00000368282.1	protein_coding	156154371,156156414,156158070,156158388,156158719,156160443,156160905,156161346,156162944,156172826,156174822,156175086,156175556,156176405	156154717,156156574,156158132,156158486,156158824,156160559,156161029,156161518,156163094,156173006,156174940,156175243,156175656,156177752	Gene ID= ENSG00000196189.12 TPM= 8.17 Transcript Type= protein_coding
chr1	156153527	156177744	156153527	156177744	+	ENST00000368285.7@SEMA4A	ENST00000368285.7	protein_coding	156153527,156154550,156156414,156158070,156158388,156158719,156160443,156160905,156161346,156162944,156172826,156174822,156175086,156175556,156176405	156153764,156154717,156156574,156158132,156158486,156158824,156160559,156161029,156161518,156163094,156173006,156174940,156175243,156175656,156177744	Gene ID= ENSG00000196189.12 TPM= 48.16 Transcript Type= protein_coding
chr1	156194109	156212796	156194109	156212796	+	transcript9939.chr1.nnic@SLC25A44	transcript9939.chr1.nnic	protein_coding	156194109,156196013,156199835,156207886,156210240	156194247,156196173,156200472,156208013,156212796	Gene ID= ENSG00000160785.13 TPM= 6.22 Transcript Type= NA
chr1	156193932	156212795	156193932	156212795	+	ENST00000423538.6@SLC25A44	ENST00000423538.6	protein_coding	156193932,156199835,156207862,156210240	156194247,156200472,156208013,156212795	Gene ID= ENSG00000160785.13 TPM= 3.89 Transcript Type= protein_coding
chr1	156194089	156212796	156194089	156212796	+	ENST00000359511.4@SLC25A44	ENST00000359511.4	protein_coding	156194089,156199835,156207886,156210240	156194247,156200472,156208013,156212796	Gene ID= ENSG00000160785.13 TPM= 30.74 Transcript Type= protein_coding
chr1	156212982	156243332	156212982	156243332	+	ENST00000490491.5@PMF1-BGLAP	ENST00000490491.5	protein_coding	156212982,156232320,156233628,156236288,156242553,156242762,156243033	156213176,156232425,156233728,156236483,156242591,156242831,156243332	Gene ID= ENSG00000260238.6 TPM= 3.5 Transcript Type= protein_coding
chr1	156213007	156240042	156213007	156240042	+	ENST00000368277.3@PMF1	ENST00000368277.3	protein_coding	156213007,156232320,156233628,156236288,156239548	156213176,156232425,156233728,156236483,156240042	Gene ID= ENSG00000160783.19 TPM= 39.7 Transcript Type= protein_coding
chr1	156212993	156240040	156212993	156240040	+	ENST00000368279.7@PMF1	ENST00000368279.7	protein_coding	156212993,156232320,156233628,156236349,156239548	156213176,156232425,156233728,156236483,156240040	Gene ID= ENSG00000160783.19 TPM= 9.34 Transcript Type= protein_coding
chr1	156243321	156248117	156243321	156248117	-	ENST00000623241.3@PAQR6	ENST00000623241.3	protein_coding	156247957,156245782,156245142,156244761,156243321	156248117,156246250,156245238,156244911,156244403	Gene ID= ENSG00000160781.15 TPM= 1.17 Transcript Type= protein_coding
chr1	156249224	156282822	156249224	156282822	-	transcript9963.chr1.nic@SMG5	transcript9963.chr1.nic	protein_coding	156282607,156278936,156277925,156277085,156274597,156273361,156272320,156268290,156268115,156267470,156266541,156265781,156263395,156261333,156260451,156259005,156253449,156252414,156251403,156250858,156249224	156282822,156279034,156278048,156277241,156274686,156273450,156272398,156268415,156268183,156267678,156266678,156266380,156263570,156261408,156260626,156259163,156253508,156253078,156251477,156250996,156250670	Gene ID= ENSG00000198952.8 TPM= 2.34 Transcript Type= NA
chr1	156266802	156282887	156266802	156282887	-	transcript9972.chr1.nic@SMG5	transcript9972.chr1.nic	protein_coding	156282607,156278936,156277925,156277085,156274597,156272320,156268290,156268115,156266802	156282887,156279034,156278048,156277241,156274686,156273450,156268415,156268183,156267678	Gene ID= ENSG00000198952.8 TPM= 2.34 Transcript Type= NA
chr1	156249224	156282825	156249224	156282825	-	ENST00000361813.5@SMG5	ENST00000361813.5	protein_coding	156282607,156278936,156277925,156277085,156274597,156273361,156272320,156268290,156268115,156267470,156266541,156265781,156263395,156261333,156260451,156259005,156253449,156252919,156252414,156251403,156250858,156249224	156282825,156279034,156278048,156277241,156274686,156273450,156272398,156268415,156268183,156267678,156266678,156266380,156263570,156261408,156260626,156259163,156253508,156253078,156252504,156251477,156250996,156250670	Gene ID= ENSG00000198952.8 TPM= 88.74 Transcript Type= protein_coding
chr1	156282948	156292443	156282948	156292443	+	ENST00000295694.9@TMEM79	ENST00000295694.9	protein_coding	156282948,156285184,156286260,156291385	156283065,156285983,156286473,156292443	Gene ID= ENSG00000163472.18 TPM= 7.01 Transcript Type= protein_coding
chr1	156292688	156295694	156292688	156295694	-	transcript9976.chr1.nic@GLMP	transcript9976.chr1.nic	protein_coding	156295526,156294759,156294365,156294018,156293320,156292688	156295694,156295016,156294565,156294236,156293429,156293209	Gene ID= ENSG00000198715.11 TPM= 2.92 Transcript Type= NA
chr1	156292687	156295689	156292687	156295689	-	ENST00000622703.4@GLMP	ENST00000622703.4	protein_coding	156295526,156294365,156294018,156293320,156292687	156295689,156294565,156294236,156293576,156293209	Gene ID= ENSG00000198715.11 TPM= 7.97 Transcript Type= protein_coding
chr1	156292688	156295677	156292688	156295677	-	transcript9991.chr1.nic@GLMP	transcript9991.chr1.nic	protein_coding	156294365,156294018,156293320,156292688	156295677,156294236,156293576,156293209	Gene ID= ENSG00000198715.11 TPM= 7.68 Transcript Type= NA
chr1	156292688	156295672	156292688	156295672	-	ENST00000362007.5@GLMP	ENST00000362007.5	protein_coding	156295526,156294759,156294365,156294018,156293320,156292688	156295672,156295016,156294565,156294236,156293576,156293209	Gene ID= ENSG00000198715.11 TPM= 68.69 Transcript Type= protein_coding
chr1	156292687	156295689	156292687	156295689	-	ENST00000612353.4@GLMP	ENST00000612353.4	protein_coding	156295526,156294759,156294365,156294018,156292687	156295689,156295016,156294565,156294236,156293209	Gene ID= ENSG00000198715.11 TPM= 2.63 Transcript Type= protein_coding
chr1	156308968	156338465	156308968	156338465	-	ENST00000295688.7@CCT3	ENST00000295688.7	protein_coding	156338154,156335827,156334868,156334713,156333547,156324972,156320839,156318868,156317415,156317166,156312041,156310950,156310558,156308968	156338465,156335888,156334918,156334775,156333643,156325089,156321025,156319017,156317547,156317247,156312221,156311195,156310689,156309303	Gene ID= ENSG00000163468.14 TPM= 332.76 Transcript Type= protein_coding
chr1	156308969	156338245	156308969	156338245	-	ENST00000368259.6@CCT3	ENST00000368259.6	protein_coding	156338154,156335827,156333547,156324972,156320839,156318868,156317415,156317166,156312041,156310950,156310558,156308969	156338245,156335888,156333643,156325089,156321025,156319017,156317547,156317247,156312221,156311195,156310689,156309303	Gene ID= ENSG00000163468.14 TPM= 11.68 Transcript Type= protein_coding
chr1	156309014	156338247	156309014	156338247	-	ENST00000368262.7@CCT3	ENST00000368262.7	protein_coding	156338154,156337079,156335827,156334868,156334713,156333547,156324972,156320839,156318868,156317415,156317166,156312041,156310950,156310558,156309014	156338247,156337240,156335888,156334918,156334775,156333643,156325089,156321025,156319017,156317547,156317247,156312221,156311195,156310689,156309303	Gene ID= ENSG00000163468.14 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr1	156463727	156500828	156463727	156500828	-	ENST00000348159.8@MEF2D	ENST00000348159.8	protein_coding	156500486,156483239,156482437,156480834,156479586,156479290,156477012,156476494,156475108,156468780,156467993,156463727	156500828,156483430,156482640,156480971,156479796,156479346,156477202,156476514,156475237,156469020,156468299,156467656	Gene ID= ENSG00000116604.17 TPM= 30.36 Transcript Type= protein_coding
chr1	156489417	156495776	156489417	156495776	+	transcript10011.chr1.nnic@NA	transcript10011.chr1.nnic	NA	156489417	156495776	Gene ID= novel_gene_chr1_10012 TPM= 56.04 Transcript Type= NA
chr1	156525405	156572540	156525405	156572540	-	ENST00000361170.6@IQGAP3	ENST00000361170.6	protein_coding	156572493,156569376,156566390,156566027,156564615,156563757,156563553,156563134,156562587,156561838,156560934,156556533,156554235,156551974,156551705,156550261,156548581,156548348,156548073,156544389,156544152,156543981,156540708,156539838,156539374,156538809,156537181,156535163,156534501,156534009,156533773,156532980,156531160,156530105,156528916,156528509,156527952,156525405	156572540,156569463,156566546,156566104,156564691,156563824,156563666,156563312,156562665,156562001,156561021,156556693,156554392,156552095,156551868,156550351,156548748,156548487,156548243,156544472,156544223,156544050,156540916,156539990,156539537,156539033,156537321,156535247,156534733,156534141,156533875,156533106,156531247,156530317,156529082,156528610,156528060,156526599	Gene ID= ENSG00000183856.10 TPM= 1.17 Transcript Type= protein_coding
chr1	156591762	156594299	156591762	156594299	+	ENST00000368235.7@NAXE	ENST00000368235.7	protein_coding	156591762,156592101,156592365,156592557,156593408,156593882	156591986,156592209,156592475,156592670,156593555,156594299	Gene ID= ENSG00000163382.11 TPM= 40.87 Transcript Type= protein_coding
chr1	156594487	156601483	156594487	156601483	-	ENST00000368232.8@GPATCH4	ENST00000368232.8	protein_coding	156601409,156598968,156598421,156598227,156598035,156596387,156596081,156594487	156601483,156599104,156598494,156598319,156598121,156596478,156596131,156595849	Gene ID= ENSG00000160818.16 TPM= 47.87 Transcript Type= protein_coding
chr1	156594487	156601482	156594487	156601482	-	transcript10022.chr1.nic@GPATCH4	transcript10022.chr1.nic	protein_coding	156601409,156598968,156598421,156598227,156598035,156596081,156594487	156601482,156599104,156598494,156598319,156598121,156596478,156595849	Gene ID= ENSG00000160818.16 TPM= 2.34 Transcript Type= NA
chr1	156624599	156625725	156624599	156625725	+	transcript10035.chr1.nnic@NA	transcript10035.chr1.nnic	NA	156624599	156625725	Gene ID= novel_gene_chr1_10036 TPM= 2.34 Transcript Type= NA
chr1	156668763	156677397	156668763	156677397	-	ENST00000368223.3@NES	ENST00000368223.3	protein_coding	156676482,156675216,156673454,156668763	156677397,156675340,156673527,156673205	Gene ID= ENSG00000132688.10 TPM= 33.86 Transcript Type= protein_coding
chr1	156722603	156728799	156722603	156728799	-	ENST00000368219.1@ISG20L2	ENST00000368219.1	protein_coding	156728415,156726906,156724148,156722603	156728799,156727769,156724348,156723462	Gene ID= ENSG00000143319.16 TPM= 2.34 Transcript Type= protein_coding
chr1	156721891	156728435	156721891	156728435	-	ENST00000313146.10@ISG20L2	ENST00000313146.10	protein_coding	156726906,156724148,156721891	156728435,156724348,156723462	Gene ID= ENSG00000143319.16 TPM= 26.85 Transcript Type= protein_coding
chr1	156728628	156736949	156728628	156736949	+	transcript10045.chr1.nic@RRNAD1	transcript10045.chr1.nic	protein_coding	156728628,156731991,156732281,156732985,156733377,156734009,156735725,156736632	156729215,156732115,156732473,156733047,156733520,156734052,156735909,156736949	Gene ID= ENSG00000143303.11 TPM= 3.7 Transcript Type= NA
chr1	156728475	156736949	156728475	156736949	+	ENST00000368216.8@RRNAD1	ENST00000368216.8	protein_coding	156728475,156731991,156732281,156732985,156733377,156734009,156735725,156736632	156729215,156732115,156732473,156733047,156733520,156734493,156735909,156736949	Gene ID= ENSG00000143303.11 TPM= 21.22 Transcript Type= protein_coding
chr1	156728476	156736949	156728476	156736949	+	transcript10050.chr1.nic@RRNAD1	transcript10050.chr1.nic	protein_coding	156728476,156731991,156732366,156732985,156733377,156734009,156735725,156736632	156729215,156732286,156732473,156733047,156733520,156734493,156735909,156736949	Gene ID= ENSG00000143303.11 TPM= 2.53 Transcript Type= NA
chr1	156728442	156736949	156728442	156736949	+	ENST00000368218.8@RRNAD1	ENST00000368218.8	protein_coding	156728442,156731991,156732281,156732985,156733377,156735725,156736632	156729215,156732115,156732473,156733047,156733520,156735909,156736949	Gene ID= ENSG00000143303.11 TPM= 8.37 Transcript Type= protein_coding
chr1	156728975	156736949	156728975	156736949	+	transcript10054.chr1.nnic@RRNAD1	transcript10054.chr1.nnic	protein_coding	156728975,156731991,156732281,156732985,156733377,156735506,156736632	156729215,156732115,156732473,156733047,156734558,156735909,156736949	Gene ID= ENSG00000143303.11 TPM= 2.53 Transcript Type= NA
chr1	156728476	156736949	156728476	156736949	+	transcript10056.chr1.nic@RRNAD1	transcript10056.chr1.nic	protein_coding	156728476,156731991,156732985,156733377,156734009,156735725,156736632	156729215,156732473,156733047,156733520,156734493,156735909,156736949	Gene ID= ENSG00000143303.11 TPM= 2.53 Transcript Type= NA
chr1	156737305	156741131	156737305	156741131	-	ENST00000368211.8@MRPL24	ENST00000368211.8	protein_coding	156741053,156738522,156738343,156738031,156737646,156737305	156741131,156738764,156738438,156738134,156737776,156737534	Gene ID= ENSG00000143314.12 TPM= 24.52 Transcript Type= protein_coding
chr1	156737303	156741088	156737303	156741088	-	ENST00000361531.6@MRPL24	ENST00000361531.6	protein_coding	156741012,156738522,156738343,156738031,156737646,156737303	156741088,156738764,156738438,156738134,156737776,156737534	Gene ID= ENSG00000143314.12 TPM= 16.35 Transcript Type= protein_coding
chr1	156742110	156751775	156742110	156751775	-	transcript10080.chr1.nic@HDGF	transcript10080.chr1.nic	protein_coding	156751343,156745297,156745008,156744501,156744163,156743652,156742110	156751775,156745373,156745146,156744570,156744348,156743878,156743455	Gene ID= ENSG00000143321.18 TPM= 13.6 Transcript Type= NA
chr1	156742107	156751744	156742107	156751744	-	ENST00000357325.9@HDGF	ENST00000357325.9	protein_coding	156751343,156745297,156745008,156744163,156743652,156742107	156751744,156745373,156745146,156744348,156743878,156743455	Gene ID= ENSG00000143321.18 TPM= 273.98 Transcript Type= protein_coding
chr1	156767489	156800817	156767489	156800817	+	transcript10074.chr1.nic@PRCC	transcript10074.chr1.nic	protein_coding	156767489,156782282,156786608,156791067,156791697,156794665,156797276,156800374	156768239,156782329,156787174,156791162,156791792,156794808,156797341,156800817	Gene ID= ENSG00000143294.14 TPM= 5.25 Transcript Type= NA
chr1	156767489	156800817	156767489	156800817	+	transcript10075.chr1.nnic@PRCC	transcript10075.chr1.nnic	protein_coding	156767489,156782282,156786608,156791697,156794665,156795795,156800374	156768239,156782329,156787174,156791792,156794808,156797341,156800817	Gene ID= ENSG00000143294.14 TPM= 2.34 Transcript Type= NA
chr1	156767500	156800817	156767500	156800817	+	ENST00000271526.8@PRCC	ENST00000271526.8	protein_coding	156767500,156782282,156786608,156791697,156794665,156797276,156800374	156768239,156782329,156787174,156791792,156794808,156797341,156800817	Gene ID= ENSG00000143294.14 TPM= 84.65 Transcript Type= protein_coding
chr1	156787652	156789902	156787652	156789902	-	transcript10103.chr1.nnic@NA	transcript10103.chr1.nnic	NA	156787652	156789902	Gene ID= novel_gene_chr1_10104 TPM= 12.84 Transcript Type= NA
chr1	156792055	156793783	156792055	156793783	-	transcript10105.chr1.nnic@NA	transcript10105.chr1.nnic	NA	156792055	156793783	Gene ID= novel_gene_chr1_10106 TPM= 8.17 Transcript Type= NA
chr1	156806243	156816862	156806243	156816862	-	ENST00000368199.7@SH2D2A	ENST00000368199.7	protein_coding	156816675,156816006,156815037,156814205,156813848,156809661,156809203,156807175,156806243	156816862,156816094,156815221,156814294,156814016,156809807,156809490,156807345,156806573	Gene ID= ENSG00000027869.11 TPM= 3.5 Transcript Type= protein_coding
chr1	156893720	156916429	156893720	156916429	+	ENST00000338302.7@PEAR1	ENST00000338302.7	protein_coding	156893720,156902188,156903918,156904748,156905324,156906276,156906637,156907610,156907915,156908128,156908655,156908916,156909751,156910006,156910234,156910618,156912247,156912494,156912770,156913194,156913391,156913692,156913852,156914647	156893837,156902285,156904027,156904852,156905424,156906368,156906880,156907730,156908051,156908340,156908829,156909036,156909914,156910108,156910380,156910743,156912375,156912622,156912982,156913282,156913523,156913760,156914100,156916429	Gene ID= ENSG00000187800.13 TPM= 29.19 Transcript Type= protein_coding
chr1	156934845	157045829	156934845	157045829	-	transcript10114.chr1.nnic@ARHGEF11	transcript10114.chr1.nnic	protein_coding	157044299,156986082,156984339,156980437,156979229,156978204,156976983,156969998,156969282,156967987,156963520,156963203,156961677,156960418,156959046,156958742,156957792,156956420,156955703,156954892,156951573,156948319,156948181,156947769,156947304,156946936,156946662,156946045,156945019,156944358,156943935,156942690,156941864,156941372,156940207,156939548,156937249,156936816,156934845	157045829,156986173,156984437,156980486,156979286,156978382,156977054,156970043,156969358,156968124,156963594,156963304,156961775,156960460,156959142,156958864,156957815,156956564,156955799,156954921,156951699,156948498,156948228,156947956,156947450,156947015,156946787,156946162,156945197,156944433,156944102,156942780,156941989,156941433,156940425,156939910,156937496,156937005,156936058	Gene ID= ENSG00000132694.18 TPM= 31.53 Transcript Type= NA
chr1	156935524	156963799	156935524	156963799	-	transcript10118.chr1.nic@ARHGEF11	transcript10118.chr1.nic	protein_coding	156963692,156963520,156963203,156961677,156960418,156959046,156958742,156957792,156956420,156955703,156954892,156951573,156948319,156948181,156947769,156947304,156946936,156946662,156946045,156945019,156944358,156943935,156942690,156941864,156941372,156940207,156939548,156938418,156937249,156936816,156935524	156963799,156963594,156963304,156961775,156960460,156959142,156958864,156957815,156956564,156955799,156954921,156951699,156948498,156948228,156947956,156947450,156947015,156946787,156946162,156945197,156944433,156944102,156942780,156941989,156941433,156940425,156939910,156938513,156937496,156937005,156936058	Gene ID= ENSG00000132694.18 TPM= 5.84 Transcript Type= NA
chr1	157285200	157311283	157285200	157311283	-	transcript10124.chr1.nnic@AL138900.2	transcript10124.chr1.nnic	lincRNA	157310999,157310583,157291590,157289733,157287982,157287695,157285200	157311283,157310681,157291982,157290029,157288122,157287786,157287413	Gene ID= ENSG00000237189.1 TPM= 2.34 Transcript Type= NA
chr1	157676482	157700857	157676482	157700857	-	ENST00000368184.7@FCRL3	ENST00000368184.7	protein_coding	157700662,157700459,157699692,157698384,157697659,157697140,157696040,157695329,157690255,157689798,157683217,157680981,157680702,157678942,157676482	157700857,157700585,157699712,157698629,157697919,157697424,157696327,157695607,157690533,157689917,157683244,157681099,157680770,157678973,157678856	Gene ID= ENSG00000160856.20 TPM= 1.17 Transcript Type= protein_coding
chr1	158254137	158258269	158254137	158258269	+	ENST00000289429.5@CD1A	ENST00000289429.5	protein_coding	158254137,158255084,158256004,158256786,158257421,158257681	158254727,158255350,158256282,158257064,158257511,158258269	Gene ID= ENSG00000158477.6 TPM= 7.01 Transcript Type= protein_coding
chr1	158289786	158293630	158289786	158293630	+	ENST00000368170.7@CD1C	ENST00000368170.7	protein_coding	158289786,158291134,158292084,158292596,158293212,158293455	158290125,158291400,158292365,158292874,158293302,158293630	Gene ID= ENSG00000158481.12 TPM= 5.84 Transcript Type= protein_coding
chr1	158327951	158331531	158327951	158331531	-	ENST00000368168.3@CD1B	ENST00000368168.3	protein_coding	158331363,158330796,158329852,158329370,158328921,158327951	158331531,158331062,158330130,158329648,158329014,158328257	Gene ID= ENSG00000158485.10 TPM= 1.17 Transcript Type= protein_coding
chr1	158831317	158849504	158831317	158849504	+	ENST00000368141.4@MNDA	ENST00000368141.4	protein_coding	158831317,158842134,158843279,158843955,158845587,158847728,158849190	158831557,158842418,158843415,158844122,158846003,158847916,158849504	Gene ID= ENSG00000163563.7 TPM= 43.2 Transcript Type= protein_coding
chr1	158999978	159055151	158999978	159055151	+	transcript10152.chr1.nic@IFI16	transcript10152.chr1.nic	protein_coding	158999978,159010003,159014661,159015872,159016533,159018229,159020341,159032524,159049432,159051679,159053533,159054821	159000395,159010161,159014945,159015987,159016700,159018651,159020529,159032691,159049599,159052098,159053724,159055151	Gene ID= ENSG00000163565.18 TPM= 2.63 Transcript Type= NA
chr1	159009874	159055151	159009874	159055151	+	transcript10155.chr1.nic@IFI16	transcript10155.chr1.nic	protein_coding	159009874,159014661,159015872,159016533,159018229,159020341,159032524,159051679,159053533,159054821	159010161,159014945,159015987,159016700,159018651,159020529,159032691,159052098,159053724,159055151	Gene ID= ENSG00000163565.18 TPM= 16.05 Transcript Type= NA
chr1	159009927	159055155	159009927	159055155	+	ENST00000295809.11@IFI16	ENST00000295809.11	protein_coding	159009927,159014661,159015872,159016533,159018229,159020341,159032524,159045297,159049432,159051679,159053533,159054821	159010161,159014945,159015987,159016700,159018651,159020529,159032691,159045464,159049599,159052098,159053724,159055155	Gene ID= ENSG00000163565.18 TPM= 29.48 Transcript Type= protein_coding
chr1	159009918	159055151	159009918	159055151	+	ENST00000368132.7@IFI16	ENST00000368132.7	protein_coding	159009918,159014661,159015872,159016533,159018229,159020341,159032524,159049432,159051679,159053533,159054821	159010161,159014945,159015987,159016700,159018651,159020529,159032691,159049599,159052098,159053724,159055151	Gene ID= ENSG00000163565.18 TPM= 25.4 Transcript Type= protein_coding
chr1	159079521	159200888	159079521	159200888	-	transcript10164.chr1.nnic@AIM2	transcript10164.chr1.nnic	protein_coding	159200812,159132243,159123520,159079521	159200888,159132356,159123581,159085238	Gene ID= ENSG00000163568.14 TPM= 2.34 Transcript Type= NA
chr1	159171609	159203313	159171609	159203313	+	ENST00000368125.8@CADM3	ENST00000368125.8	protein_coding	159171609,159191936,159192578,159193423,159193870,159196364,159196891,159199751,159200804	159171853,159192076,159192730,159193560,159194040,159196454,159197060,159199876,159203313	Gene ID= ENSG00000162706.12 TPM= 3.5 Transcript Type= protein_coding
chr1	159194325	159202512	159194325	159202512	-	ENST00000415675.3@CADM3-AS1	ENST00000415675.3	antisense_RNA	159202250,159200812,159199786,159194325	159202512,159201621,159199859,159198221	Gene ID= ENSG00000225670.4 TPM= 9.34 Transcript Type= antisense_RNA
chr1	159204281	159206500	159204281	159206500	+	ENST00000368122.2@ACKR1	ENST00000368122.2	protein_coding	159204281,159205461	159204980,159206500	Gene ID= ENSG00000213088.9 TPM= 193.24 Transcript Type= protein_coding
chr1	159204901	159206500	159204901	159206500	+	transcript10172.chr1.nnic@ACKR1	transcript10172.chr1.nnic	protein_coding	159204901,159205552	159204980,159206500	Gene ID= ENSG00000213088.9 TPM= 9.92 Transcript Type= NA
chr1	159205259	159206498	159205259	159206498	+	ENST00000368121.3@ACKR1	ENST00000368121.3	protein_coding	159205259	159206498	Gene ID= ENSG00000213088.9 TPM= 14.01 Transcript Type= protein_coding
chr1	159780960	159782543	159780960	159782543	+	ENST00000368108.7@DUSP23	ENST00000368108.7	protein_coding	159780960,159781099,159782153	159780993,159781367,159782543	Gene ID= ENSG00000158716.8 TPM= 44.37 Transcript Type= protein_coding
chr1	159781003	159782543	159781003	159782543	+	ENST00000368107.1@DUSP23	ENST00000368107.1	protein_coding	159781003,159782153	159781367,159782543	Gene ID= ENSG00000158716.8 TPM= 66.55 Transcript Type= protein_coding
chr1	159780969	159782543	159780969	159782543	+	transcript10181.chr1.nnic@NA	transcript10181.chr1.nnic	NA	159780969	159782543	Gene ID= novel_gene_chr1_10182 TPM= 9.34 Transcript Type= NA
chr1	159826750	159837249	159826750	159837249	+	ENST00000289707.9@SLAMF8	ENST00000289707.9	protein_coding	159826750,159829866,159832876,159833262,159835184	159826938,159830192,159833181,159833369,159837249	Gene ID= ENSG00000158714.10 TPM= 33.86 Transcript Type= protein_coding
chr1	159834474	159855347	159834474	159855347	-	ENST00000368102.5@SNHG28	ENST00000368102.5	protein_coding	159855176,159854757,159841126,159840711,159837917,159834474	159855347,159855026,159841235,159840866,159838027,159836155	Gene ID= ENSG00000188004.9 TPM= 3.5 Transcript Type= protein_coding
chr1	159834474	159854922	159834474	159854922	-	transcript10194.chr1.nnic@SNHG28	transcript10194.chr1.nnic	protein_coding	159854757,159841126,159837917,159834474	159854922,159841235,159838027,159836155	Gene ID= ENSG00000188004.9 TPM= 3.5 Transcript Type= NA
chr1	159918107	159925732	159918107	159925732	-	ENST00000368097.8@TAGLN2	ENST00000368097.8	protein_coding	159925450,159920330,159919661,159919274,159918107	159925732,159920537,159919835,159919376,159918941	Gene ID= ENSG00000158710.14 TPM= 474.53 Transcript Type= protein_coding
chr1	159918110	159921173	159918110	159921173	-	transcript10206.chr1.nnic@NA	transcript10206.chr1.nnic	NA	159918110	159921173	Gene ID= novel_gene_chr1_10207 TPM= 3.5 Transcript Type= NA
chr1	159961224	159979061	159961224	159979061	+	ENST00000423943.1@LINC01133	ENST00000423943.1	lincRNA	159961224,159976644,159978600	159961405,159977112,159979061	Gene ID= ENSG00000224259.6 TPM= 2.34 Transcript Type= lincRNA
chr1	160030018	160031903	160030018	160031903	-	transcript10210.chr1.nnic@NA	transcript10210.chr1.nnic	NA	160030018	160031903	Gene ID= novel_gene_chr1_10211 TPM= 2.34 Transcript Type= NA
chr1	160091340	160098689	160091340	160098689	-	ENST00000314485.11@IGSF8	ENST00000314485.11	protein_coding	160098409,160094869,160093710,160092924,160092282,160091808,160091340	160098689,160095246,160094171,160093331,160092695,160091938,160091608	Gene ID= ENSG00000162729.13 TPM= 76.36 Transcript Type= protein_coding
chr1	160091340	160098652	160091340	160098652	-	transcript10222.chr1.nnic@IGSF8	transcript10222.chr1.nnic	protein_coding	160098409,160094869,160093710,160093210,160092282,160091808,160091340	160098652,160095246,160094171,160093331,160092695,160091938,160091608	Gene ID= ENSG00000162729.13 TPM= 4.36 Transcript Type= NA
chr1	160091340	160098689	160091340	160098689	-	ENST00000368086.5@IGSF8	ENST00000368086.5	protein_coding	160098409,160094869,160093710,160092924,160092282,160091808,160091340	160098689,160095246,160094171,160093331,160092695,160091938,160091631	Gene ID= ENSG00000162729.13 TPM= 6.04 Transcript Type= protein_coding
chr1	160091340	160098652	160091340	160098652	-	transcript10224.chr1.nic@IGSF8	transcript10224.chr1.nic	protein_coding	160098409,160094869,160093710,160092282,160091808,160091340	160098652,160095246,160094171,160093331,160091938,160091608	Gene ID= ENSG00000162729.13 TPM= 10.78 Transcript Type= NA
chr1	160091340	160098652	160091340	160098652	-	transcript10225.chr1.nic@IGSF8	transcript10225.chr1.nic	protein_coding	160098409,160093710,160092282,160091808,160091340	160098652,160095246,160093331,160091938,160091608	Gene ID= ENSG00000162729.13 TPM= 9.42 Transcript Type= NA
chr1	160091350	160098828	160091350	160098828	-	ENST00000614243.4@IGSF8	ENST00000614243.4	protein_coding	160098799,160098409,160094869,160093710,160092924,160092282,160091808,160091350	160098828,160098517,160095246,160094171,160093331,160092695,160091938,160091608	Gene ID= ENSG00000162729.13 TPM= 4.67 Transcript Type= protein_coding
chr1	160115773	160143591	160115773	160143591	+	ENST00000361216.7@ATP1A2	ENST00000361216.7	protein_coding	160115773,160120906,160121192,160123213,160123943,160124296,160125136,160127552,160128652,160128980,160129266,160130102,160130422,160134484,160135145,160135434,160135839,160136247,160136570,160136901,160139640,160139893,160141294	160115873,160121010,160121251,160123416,160124056,160124430,160125253,160127820,160128850,160129089,160129400,160130291,160130597,160134620,160135295,160135602,160135993,160136370,160136715,160137031,160139741,160139984,160143591	Gene ID= ENSG00000018625.14 TPM= 8.17 Transcript Type= protein_coding
chr1	160205337	160215376	160205337	160215376	+	ENST00000360472.8@PEA15	ENST00000360472.8	protein_coding	160205337,160211543,160213110,160213422	160205522,160211716,160213265,160215376	Gene ID= ENSG00000162734.12 TPM= 267.38 Transcript Type= protein_coding
chr1	160215715	160262486	160215715	160262486	-	transcript10261.chr1.nic@DCAF8	transcript10261.chr1.nic	protein_coding	160262117,160243960,160239697,160238607,160237135,160231297,160225591,160225062,160224442,160222651,160218849,160218324,160215715	160262486,160244034,160240370,160238747,160237229,160231407,160225663,160225119,160224549,160222781,160218968,160218440,160217708	Gene ID= ENSG00000132716.18 TPM= 10.89 Transcript Type= NA
chr1	160216738	160262473	160216738	160262473	-	transcript10275.chr1.nic@DCAF8	transcript10275.chr1.nic	protein_coding	160261285,160243960,160239697,160238607,160237135,160231297,160225591,160225062,160224442,160222651,160218849,160218324,160216738	160262473,160244034,160240370,160238747,160237229,160231407,160225663,160225119,160224549,160222781,160218968,160218440,160217708	Gene ID= ENSG00000132716.18 TPM= 7.01 Transcript Type= NA
chr1	160215715	160262476	160215715	160262476	-	ENST00000326837.6@DCAF8	ENST00000326837.6	protein_coding	160262276,160261285,160243960,160239697,160238607,160237135,160231297,160225591,160225062,160224442,160222651,160218849,160218324,160215715	160262476,160261358,160244034,160240370,160238747,160237229,160231407,160225663,160225119,160224549,160222781,160218968,160218440,160217708	Gene ID= ENSG00000132716.18 TPM= 15.18 Transcript Type= protein_coding
chr1	160215715	160262501	160215715	160262501	-	ENST00000368074.5@DCAF8	ENST00000368074.5	protein_coding	160262449,160261285,160243960,160239697,160238607,160237135,160231297,160225591,160225062,160224442,160222651,160218849,160218324,160215715	160262501,160261358,160244034,160240370,160238747,160237229,160231407,160225663,160225119,160224549,160222781,160218968,160218440,160217708	Gene ID= ENSG00000132716.18 TPM= 8.17 Transcript Type= protein_coding
chr1	160215715	160262451	160215715	160262451	-	ENST00000368073.7@DCAF8	ENST00000368073.7	protein_coding	160262117,160261285,160243960,160239697,160238607,160237135,160231297,160225591,160225062,160224442,160222651,160218849,160218324,160215715	160262451,160261358,160244034,160240370,160238747,160237229,160231407,160225663,160225119,160224549,160222781,160218968,160218440,160217708	Gene ID= ENSG00000132716.18 TPM= 12.84 Transcript Type= protein_coding
chr1	160276867	160285154	160276867	160285154	-	ENST00000472750.5@PEX19	ENST00000472750.5	protein_coding	160285055,160282944,160282417,160282039,160280070,160279801,160276867	160285154,160283109,160282502,160282200,160280246,160279845,160279634	Gene ID= ENSG00000162735.18 TPM= 11.68 Transcript Type= nonsense_mediated_decay
chr1	160276812	160285146	160276812	160285146	-	ENST00000368072.9@PEX19	ENST00000368072.9	protein_coding	160285055,160283530,160282944,160282417,160282039,160280070,160279801,160276812	160285146,160283639,160283109,160282502,160282200,160280246,160279845,160279634	Gene ID= ENSG00000162735.18 TPM= 7.01 Transcript Type= protein_coding
chr1	160289273	160343400	160289273	160343400	-	ENST00000241704.7@COPA	ENST00000241704.7	protein_coding	160343131,160340181,160339909,160335242,160333603,160332448,160325543,160323431,160313990,160313085,160311868,160310192,160309101,160307163,160306354,160305688,160305433,160299102,160298845,160297556,160297343,160296061,160295736,160294768,160294484,160293386,160293166,160292484,160292012,160291819,160291335,160290492,160289273	160343400,160340294,160339982,160335322,160333679,160332557,160325652,160323530,160314125,160313167,160312018,160310258,160309176,160307245,160306493,160305773,160305571,160299264,160298991,160297745,160297438,160296149,160295859,160294857,160294593,160293463,160293234,160292620,160292198,160291929,160291496,160290686,160290216	Gene ID= ENSG00000122218.14 TPM= 217.76 Transcript Type= protein_coding
chr1	160289273	160343248	160289273	160343248	-	ENST00000368069.7@COPA	ENST00000368069.7	protein_coding	160343131,160340181,160339909,160335242,160333603,160332448,160325543,160323431,160313990,160313085,160311868,160310192,160309101,160307163,160306354,160305688,160305433,160299102,160298845,160297556,160297343,160296061,160295736,160294768,160294484,160293386,160293166,160292484,160292012,160291819,160291335,160290492,160289273	160343248,160340294,160339982,160335322,160333679,160332557,160325652,160323530,160314125,160313167,160312018,160310258,160309176,160307245,160306493,160305773,160305598,160299264,160298991,160297745,160297438,160296149,160295859,160294857,160294593,160293463,160293234,160292620,160292198,160291929,160291496,160290686,160290216	Gene ID= ENSG00000122218.14 TPM= 21.6 Transcript Type= protein_coding
chr1	160333462	160343259	160333462	160343259	-	ENST00000541366.1@COPA	ENST00000541366.1	protein_coding	160343131,160340181,160339909,160335242,160333462	160343259,160340294,160339982,160335322,160333679	Gene ID= ENSG00000122218.14 TPM= 1.17 Transcript Type= retained_intron
chr1	160309744	160311473	160309744	160311473	-	transcript10331.chr1.nnic@NA	transcript10331.chr1.nnic	NA	160309744	160311473	Gene ID= novel_gene_chr1_10332 TPM= 2.34 Transcript Type= NA
chr1	160327154	160331663	160327154	160331663	+	transcript10329.chr1.nnic@NA	transcript10329.chr1.nnic	NA	160327154	160331663	Gene ID= novel_gene_chr1_10330 TPM= 5.84 Transcript Type= NA
chr1	160343272	160358952	160343272	160358952	+	ENST00000294785.9@NCSTN	ENST00000294785.9	protein_coding	160343272,160344722,160348999,160349549,160350105,160351222,160351696,160352054,160352887,160353160,160354118,160355655,160355863,160356260,160356600,160357041,160358149	160343481,160344826,160349122,160349670,160350250,160351372,160351805,160352206,160352991,160353237,160354290,160355757,160355958,160356347,160356754,160357253,160358952	Gene ID= ENSG00000162736.15 TPM= 110.92 Transcript Type= protein_coding
chr1	160400586	160428678	160400586	160428678	+	ENST00000368061.2@VANGL2	ENST00000368061.2	protein_coding	160400586,160415648,160416062,160419002,160420411,160421052,160424052,160425118	160400869,160415908,160416182,160419609,160420547,160421187,160424283,160428678	Gene ID= ENSG00000162738.5 TPM= 8.17 Transcript Type= protein_coding
chr1	160485030	160523262	160485030	160523262	-	ENST00000368059.7@SLAMF6	ENST00000368059.7	protein_coding	160523144,160496061,160491125,160490575,160490198,160489088,160487104,160485030	160523262,160496393,160491388,160490685,160490236,160489167,160487175,160486754	Gene ID= ENSG00000162739.13 TPM= 5.84 Transcript Type= protein_coding
chr1	160485055	160523253	160485055	160523253	-	ENST00000368057.7@SLAMF6	ENST00000368057.7	protein_coding	160523144,160496061,160491125,160490575,160490198,160489088,160487104,160485055	160523253,160496393,160491388,160490685,160490236,160489170,160487175,160486754	Gene ID= ENSG00000162739.13 TPM= 1.17 Transcript Type= protein_coding
chr1	160608100	160647295	160608100	160647295	-	ENST00000302035.10@SLAMF1	ENST00000302035.10	protein_coding	160646870,160637191,160634613,160624096,160619776,160612488,160608100	160647295,160637529,160634897,160624185,160619849,160612580,160610798	Gene ID= ENSG00000117090.14 TPM= 1.17 Transcript Type= protein_coding
chr1	160678746	160711851	160678746	160711851	-	ENST00000368046.7@CD48	ENST00000368046.7	protein_coding	160711682,160684887,160681202,160678746	160711851,160685189,160681468,160679131	Gene ID= ENSG00000117091.9 TPM= 3.5 Transcript Type= protein_coding
chr1	160739265	160754821	160739265	160754821	+	ENST00000368043.7@SLAMF7	ENST00000368043.7	protein_coding	160739265,160748194,160749821,160750304,160751345,160752186,160753106	160739356,160748514,160750093,160750423,160751448,160752248,160754821	Gene ID= ENSG00000026751.16 TPM= 5.84 Transcript Type= protein_coding
chr1	160796158	160828261	160796158	160828261	+	ENST00000263285.10@LY9	ENST00000263285.10	protein_coding	160796158,160799753,160813636,160814420,160816594,160818218,160819321,160823465,160824181,160827748	160796311,160800082,160813911,160814761,160816863,160818319,160819374,160823796,160824249,160828261	Gene ID= ENSG00000122224.17 TPM= 3.5 Transcript Type= protein_coding
chr1	160796187	160802698	160796187	160802698	+	ENST00000368039.2@LY9	ENST00000368039.2	protein_coding	160796187,160799753,160801790	160796311,160800082,160802698	Gene ID= ENSG00000122224.17 TPM= 2.34 Transcript Type= protein_coding
chr1	160830160	160862855	160830160	160862855	-	ENST00000368034.8@CD244	ENST00000368034.8	protein_coding	160862617,160841584,160841210,160838939,160838451,160836195,160834051,160832519,160830160	160862855,160841901,160841485,160839049,160838518,160836254,160834116,160832575,160831427	Gene ID= ENSG00000122223.12 TPM= 2.34 Transcript Type= protein_coding
chr1	160876539	160885170	160876539	160885170	-	ENST00000326245.3@ITLN1	ENST00000326245.3	protein_coding	160885061,160884820,160883428,160881957,160881154,160880588,160879311,160876539	160885170,160884883,160883526,160882204,160881312,160880708,160879414,160876816	Gene ID= ENSG00000179914.4 TPM= 302.41 Transcript Type= protein_coding
chr1	160944489	160951493	160944489	160951493	-	transcript10358.chr1.nic@ITLN2	transcript10358.chr1.nic	protein_coding	160951043,160950553,160950046,160947929,160944489	160951493,160950711,160950166,160948032,160945292	Gene ID= ENSG00000158764.6 TPM= 8.17 Transcript Type= NA
chr1	160995211	161021348	160995211	161021348	-	ENST00000368026.10@F11R	ENST00000368026.10	protein_coding	161021010,161001285,161001020,161000631,161000146,160999876,160999640,160999396,160999043,160995211	161021348,161001353,161001127,161000777,161000348,160999978,160999747,160999408,160999091,160998906	Gene ID= ENSG00000158769.17 TPM= 39.7 Transcript Type= protein_coding
chr1	161007240	161010455	161007240	161010455	+	transcript10393.chr1.nnic@NA	transcript10393.chr1.nnic	NA	161007240	161010455	Gene ID= novel_gene_chr1_10394 TPM= 3.5 Transcript Type= NA
chr1	161037631	161038963	161037631	161038963	-	transcript10385.chr1.nnic@TSTD1	transcript10385.chr1.nnic	protein_coding	161038880,161038551,161037913,161037631	161038963,161038634,161038075,161037826	Gene ID= ENSG00000215845.10 TPM= 2.34 Transcript Type= NA
chr1	161037631	161038950	161037631	161038950	-	ENST00000368023.7@TSTD1	ENST00000368023.7	protein_coding	161038880,161038551,161037913,161037631	161038950,161038694,161038075,161037826	Gene ID= ENSG00000215845.10 TPM= 1.17 Transcript Type= protein_coding
chr1	161037631	161038990	161037631	161038990	-	ENST00000423014.2@TSTD1	ENST00000423014.2	protein_coding	161038880,161038551,161037913,161037631	161038990,161038673,161038075,161037826	Gene ID= ENSG00000215845.10 TPM= 21.02 Transcript Type= protein_coding
chr1	161037631	161038937	161037631	161038937	-	ENST00000318289.14@TSTD1	ENST00000318289.14	protein_coding	161038880,161038551,161037631	161038937,161038673,161038075	Gene ID= ENSG00000215845.10 TPM= 14.01 Transcript Type= protein_coding
chr1	161037636	161038976	161037636	161038976	-	transcript10399.chr1.nnic@NA	transcript10399.chr1.nnic	NA	161037636	161038976	Gene ID= novel_gene_chr1_10400 TPM= 5.84 Transcript Type= NA
chr1	161039251	161045988	161039251	161045988	-	transcript10379.chr1.nic@USF1	transcript10379.chr1.nic	protein_coding	161045858,161043268,161042833,161042555,161042116,161041651,161041324,161040814,161040202,161039251	161045988,161043360,161042882,161042670,161042217,161041846,161041411,161040872,161040670,161040009	Gene ID= ENSG00000158773.14 TPM= 8.17 Transcript Type= NA
chr1	161039251	161045988	161039251	161045988	-	transcript10380.chr1.nic@USF1	transcript10380.chr1.nic	protein_coding	161045858,161043268,161042833,161042586,161042116,161041651,161041324,161040814,161040202,161039251	161045988,161043360,161042882,161042670,161042217,161041846,161041411,161040872,161040670,161040009	Gene ID= ENSG00000158773.14 TPM= 7.01 Transcript Type= NA
chr1	161039251	161045977	161039251	161045977	-	ENST00000368021.7@USF1	ENST00000368021.7	protein_coding	161045858,161043268,161042833,161042555,161042116,161041651,161041324,161040814,161040576,161040202,161039251	161045977,161043360,161042882,161042670,161042217,161041846,161041411,161040872,161040670,161040330,161040009	Gene ID= ENSG00000158773.14 TPM= 17.51 Transcript Type= protein_coding
chr1	161046948	161069817	161046948	161069817	-	transcript10404.chr1.nnic@ARHGAP30	transcript10404.chr1.nnic	protein_coding	161069528,161059614,161056388,161054623,161054366,161053258,161052626,161052440,161052286,161051314,161049595,161046948	161069817,161059716,161056532,161054705,161054473,161053385,161052797,161052543,161052363,161051715,161049689,161049334	Gene ID= ENSG00000186517.13 TPM= 8.17 Transcript Type= NA
chr1	161046946	161069924	161046946	161069924	-	transcript10407.chr1.nnic@ARHGAP30	transcript10407.chr1.nnic	protein_coding	161069528,161056388,161054623,161054366,161053258,161052626,161052440,161052286,161051314,161049424,161046946	161069924,161056532,161054705,161054473,161053385,161052797,161052543,161052363,161051715,161049689,161049334	Gene ID= ENSG00000186517.13 TPM= 14.3 Transcript Type= NA
chr1	161046946	161069701	161046946	161069701	-	transcript10409.chr1.nnic@ARHGAP30	transcript10409.chr1.nnic	protein_coding	161069528,161059614,161056388,161054623,161054366,161053258,161052626,161052440,161052286,161049424,161046946	161069701,161059716,161056532,161054705,161054473,161053385,161052797,161052543,161052363,161049689,161049334	Gene ID= ENSG00000186517.13 TPM= 4.96 Transcript Type= NA
chr1	161046946	161070011	161046946	161070011	-	transcript10410.chr1.nic@ARHGAP30	transcript10410.chr1.nic	protein_coding	161069528,161059614,161056388,161054623,161054366,161053258,161052626,161052440,161052286,161051314,161046946	161070011,161059716,161056532,161054705,161054473,161053385,161052797,161052543,161052363,161051715,161049689	Gene ID= ENSG00000186517.13 TPM= 8.17 Transcript Type= NA
chr1	161048790	161069809	161048790	161069809	-	transcript10414.chr1.nic@ARHGAP30	transcript10414.chr1.nic	protein_coding	161069528,161059614,161056388,161054623,161054366,161053258,161052440,161052286,161051314,161049424,161048790	161069809,161059716,161056532,161054705,161054473,161053385,161052797,161052363,161051715,161049689,161049334	Gene ID= ENSG00000186517.13 TPM= 2.34 Transcript Type= NA
chr1	161046946	161069817	161046946	161069817	-	transcript10415.chr1.nic@ARHGAP30	transcript10415.chr1.nic	protein_coding	161069528,161054623,161054366,161053258,161052626,161052440,161052286,161051314,161049424,161046946	161069817,161054705,161054473,161053385,161052797,161052543,161052363,161051715,161049689,161049334	Gene ID= ENSG00000186517.13 TPM= 14.3 Transcript Type= NA
chr1	161046948	161069945	161046948	161069945	-	ENST00000368013.7@ARHGAP30	ENST00000368013.7	protein_coding	161069528,161059614,161056388,161054623,161054366,161053258,161052626,161052440,161052286,161051314,161049424,161046948	161069945,161059716,161056532,161054705,161054473,161053385,161052797,161052543,161052363,161051715,161049689,161049334	Gene ID= ENSG00000186517.13 TPM= 49.33 Transcript Type= protein_coding
chr1	161070995	161089599	161070995	161089599	-	ENST00000368012.3@NECTIN4	ENST00000368012.3	protein_coding	161089218,161079590,161077453,161076355,161074611,161074217,161073720,161073225,161070995	161089599,161079949,161077743,161076475,161074759,161074373,161073795,161073299,161072885	Gene ID= ENSG00000143217.8 TPM= 8.17 Transcript Type= protein_coding
chr1	161070998	161089567	161070998	161089567	-	transcript10420.chr1.nic@NECTIN4	transcript10420.chr1.nic	protein_coding	161089218,161079590,161077453,161076355,161074611,161074217,161073720,161070998	161089567,161079949,161077743,161076475,161074759,161074373,161073795,161072885	Gene ID= ENSG00000143217.8 TPM= 4.67 Transcript Type= NA
chr1	161098361	161100298	161098361	161100298	+	ENST00000490724.6@KLHDC9	ENST00000490724.6	protein_coding	161098361,161098666,161099346,161099598,161100061	161098404,161099062,161099505,161099796,161100298	Gene ID= ENSG00000162755.13 TPM= 1.17 Transcript Type= processed_transcript
chr1	161098363	161100343	161098363	161100343	+	ENST00000469647.5@KLHDC9	ENST00000469647.5	protein_coding	161098363,161098666,161099598,161100061	161098404,161099062,161099796,161100343	Gene ID= ENSG00000162755.13 TPM= 1.17 Transcript Type= processed_transcript
chr1	161098394	161100346	161098394	161100346	+	ENST00000368011.8@KLHDC9	ENST00000368011.8	protein_coding	161098394,161099346,161099598,161100061	161099062,161099505,161099796,161100346	Gene ID= ENSG00000162755.13 TPM= 2.34 Transcript Type= protein_coding
chr1	161100556	161118111	161100556	161118111	-	ENST00000368010.3@PFDN2	ENST00000368010.3	protein_coding	161117952,161102287,161102048,161100556	161118111,161102375,161102171,161100859	Gene ID= ENSG00000143256.4 TPM= 49.04 Transcript Type= protein_coding
chr1	161100556	161118055	161100556	161118055	-	ENST00000468311.1@PFDN2	ENST00000468311.1	protein_coding	161117952,161100556	161118055,161100859	Gene ID= ENSG00000143256.4 TPM= 1.17 Transcript Type= processed_transcript
chr1	161118101	161121067	161118101	161121067	+	transcript10429.chr1.nic@NIT1	transcript10429.chr1.nic	protein_coding	161118101,161118786,161119134,161119509,161119819,161120107,161120499	161118209,161118881,161119388,161119612,161119952,161120232,161121067	Gene ID= ENSG00000158793.13 TPM= 2.34 Transcript Type= NA
chr1	161118101	161121067	161118101	161121067	+	ENST00000368009.6@NIT1	ENST00000368009.6	protein_coding	161118101,161118786,161119134,161119509,161119819,161120107,161120499	161118178,161118881,161119388,161119612,161119952,161120232,161121067	Gene ID= ENSG00000158793.13 TPM= 50.21 Transcript Type= protein_coding
chr1	161118118	161121193	161118118	161121193	+	ENST00000392190.9@NIT1	ENST00000392190.9	protein_coding	161118118,161118786,161119134,161119509,161119819,161120107,161120499	161118225,161118881,161119388,161119612,161119952,161120232,161121193	Gene ID= ENSG00000158793.13 TPM= 1.17 Transcript Type= protein_coding
chr1	161121333	161132399	161121333	161132399	-	transcript10444.chr1.nic@DEDD	transcript10444.chr1.nic	protein_coding	161130815,161124138,161123839,161123075,161121333	161132399,161124526,161123946,161123221,161122523	Gene ID= ENSG00000158796.16 TPM= 3.5 Transcript Type= NA
chr1	161120977	161132688	161120977	161132688	-	ENST00000545495.5@DEDD	ENST00000545495.5	protein_coding	161132551,161124138,161123839,161123075,161120977	161132688,161124526,161123946,161123221,161122523	Gene ID= ENSG00000158796.16 TPM= 1.17 Transcript Type= protein_coding
chr1	161121787	161132667	161121787	161132667	-	ENST00000490843.6@DEDD	ENST00000490843.6	protein_coding	161132551,161130815,161124138,161123839,161123075,161121787	161132667,161130843,161124526,161123946,161123221,161122523	Gene ID= ENSG00000158796.16 TPM= 2.34 Transcript Type= protein_coding
chr1	161153752	161158856	161153752	161158856	+	ENST00000368003.5@UFC1	ENST00000368003.5	protein_coding	161153752,161156950,161157254,161157617,161158121,161158412	161154120,161157017,161157317,161157693,161158211,161158856	Gene ID= ENSG00000143222.11 TPM= 80.56 Transcript Type= protein_coding
chr1	161159454	161165723	161159454	161165723	+	transcript10453.chr1.nic@USP21	transcript10453.chr1.nic	protein_coding	161159454,161160620,161162038,161162270,161162615,161162919,161163555,161163878,161164164,161164534,161164835,161165029,161165357	161159678,161161240,161162097,161162390,161162726,161163074,161163619,161163922,161164250,161164612,161164942,161165143,161165723	Gene ID= ENSG00000143258.15 TPM= 5.06 Transcript Type= NA
chr1	161159454	161165723	161159454	161165723	+	transcript10460.chr1.nic@USP21	transcript10460.chr1.nic	protein_coding	161159454,161160620,161162038,161162270,161162615,161162919,161163555,161163878,161164164,161164534,161165029,161165357	161159678,161161240,161162097,161162390,161162726,161163074,161163619,161163981,161164250,161164942,161165143,161165723	Gene ID= ENSG00000143258.15 TPM= 3.89 Transcript Type= NA
chr1	161159479	161165723	161159479	161165723	+	ENST00000289865.12@USP21	ENST00000289865.12	protein_coding	161159479,161160620,161162038,161162270,161162615,161162919,161163555,161163878,161164164,161164534,161164835,161165029,161165357	161159678,161161240,161162097,161162390,161162726,161163074,161163619,161163981,161164250,161164612,161164942,161165143,161165723	Gene ID= ENSG00000143258.15 TPM= 35.41 Transcript Type= protein_coding
chr1	161159464	161165714	161159464	161165714	+	ENST00000368002.7@USP21	ENST00000368002.7	protein_coding	161159464,161160366,161160620,161162038,161162270,161162615,161162919,161163555,161163878,161164164,161164534,161164835,161165029,161165357	161159678,161160506,161161240,161162097,161162390,161162726,161163074,161163619,161163981,161164250,161164612,161164942,161165143,161165714	Gene ID= ENSG00000143258.15 TPM= 7.01 Transcript Type= protein_coding
chr1	161166408	161171218	161166408	161171218	+	transcript10475.chr1.nnic@PPOX	transcript10475.chr1.nnic	protein_coding	161166408,161166840,161167100,161167355,161167995,161168432,161168993,161169660,161169906,161170409,161170620,161170907,161171034	161166672,161166934,161167234,161167486,161168127,161168576,161169183,161169720,161170024,161170519,161170769,161170949,161171218	Gene ID= ENSG00000143224.17 TPM= 2.63 Transcript Type= NA
chr1	161166410	161171218	161166410	161171218	+	ENST00000352210.9@PPOX	ENST00000352210.9	protein_coding	161166410,161166840,161167100,161167371,161167995,161168432,161168993,161169660,161169906,161170409,161170620,161170907,161171034	161166611,161166934,161167234,161167486,161168127,161168576,161169183,161169720,161170024,161170519,161170769,161170949,161171218	Gene ID= ENSG00000143224.17 TPM= 2.63 Transcript Type= protein_coding
chr1	161166408	161171218	161166408	161171218	+	transcript10481.chr1.nic@PPOX	transcript10481.chr1.nic	protein_coding	161166408,161166840,161167100,161167995,161168432,161168993,161169660,161169906,161170409,161170620,161170907,161171034	161166672,161166934,161167486,161168127,161168576,161169183,161169720,161170024,161170519,161170769,161170949,161171218	Gene ID= ENSG00000143224.17 TPM= 3.79 Transcript Type= NA
chr1	161166415	161171216	161166415	161171216	+	ENST00000367999.8@PPOX	ENST00000367999.8	protein_coding	161166415,161166840,161167100,161167371,161167995,161168432,161168993,161169660,161169906,161170409,161170620,161170907,161171034	161166672,161166934,161167234,161167486,161168127,161168576,161169183,161169720,161170024,161170519,161170769,161170949,161171216	Gene ID= ENSG00000143224.17 TPM= 9.63 Transcript Type= protein_coding
chr1	161166470	161171220	161166470	161171220	+	ENST00000544598.5@PPOX	ENST00000544598.5	protein_coding	161166470,161166840,161167100,161170620,161170907,161171034	161166672,161166934,161167234,161170769,161170949,161171220	Gene ID= ENSG00000143224.17 TPM= 1.17 Transcript Type= protein_coding
chr1	161171311	161177968	161171311	161177968	-	ENST00000622395.4@B4GALT3	ENST00000622395.4	protein_coding	161177423,161176434,161175808,161174993,161173859,161173605,161172227,161171311	161177968,161176579,161176095,161175228,161174049,161173727,161172331,161172089	Gene ID= ENSG00000158850.14 TPM= 18.1 Transcript Type= protein_coding
chr1	161171312	161177497	161171312	161177497	-	ENST00000367998.5@B4GALT3	ENST00000367998.5	protein_coding	161177423,161176434,161175808,161174993,161173859,161173605,161172227,161171312	161177497,161176508,161176095,161175228,161174049,161173727,161172331,161172089	Gene ID= ENSG00000158850.14 TPM= 2.92 Transcript Type= protein_coding
chr1	161171310	161177527	161171310	161177527	-	transcript10494.chr1.nic@B4GALT3	transcript10494.chr1.nic	protein_coding	161177423,161175808,161174993,161173859,161173605,161172227,161171310	161177527,161176579,161175228,161174049,161173727,161172331,161172089	Gene ID= ENSG00000158850.14 TPM= 2.92 Transcript Type= NA
chr1	161171310	161177485	161171310	161177485	-	ENST00000319769.9@B4GALT3	ENST00000319769.9	protein_coding	161177423,161176434,161175808,161174993,161173859,161173605,161172227,161171310	161177485,161176579,161176074,161175228,161174049,161173727,161172331,161172089	Gene ID= ENSG00000158850.14 TPM= 53.13 Transcript Type= protein_coding
chr1	161184308	161199056	161184308	161199056	-	ENST00000367996.5@ADAMTS4	ENST00000367996.5	protein_coding	161197995,161196557,161196171,161195465,161193935,161193640,161193213,161192065,161184308	161199056,161196880,161196303,161195635,161194221,161193826,161193388,161192240,161191564	Gene ID= ENSG00000158859.9 TPM= 3.5 Transcript Type= protein_coding
chr1	161202367	161214395	161202367	161214395	+	transcript10507.chr1.nnic@NDUFS2	transcript10507.chr1.nnic	protein_coding	161202367,161206407,161209193,161209483,161209857,161210111,161210304,161210591,161212351,161213380,161213649,161213864,161214156	161202480,161206597,161209313,161209595,161209931,161210188,161210389,161210710,161212480,161213475,161213732,161213921,161214395	Gene ID= ENSG00000158864.12 TPM= 12.26 Transcript Type= NA
chr1	161215234	161219248	161215234	161219248	+	ENST00000490414.1@FCER1G	ENST00000490414.1	protein_coding	161215234,161218241,161218703,161218881	161215370,161218276,161218723,161219248	Gene ID= ENSG00000158869.10 TPM= 6.42 Transcript Type= processed_transcript
chr1	161215297	161219248	161215297	161219248	+	ENST00000289902.1@FCER1G	ENST00000289902.1	protein_coding	161215297,161217986,161218241,161218703,161218881	161215370,161218077,161218276,161218723,161219248	Gene ID= ENSG00000158869.10 TPM= 166.38 Transcript Type= protein_coding
chr1	161226003	161230607	161226003	161230607	+	ENST00000367988.7@TOMM40L	ENST00000367988.7	protein_coding	161226003,161226355,161226888,161227258,161227636,161227884,161228186,161228428,161228715,161228956	161226136,161226604,161226955,161227350,161227737,161227989,161228308,161228504,161228817,161230607	Gene ID= ENSG00000158882.14 TPM= 11.09 Transcript Type= protein_coding
chr1	161258727	161285450	161258727	161285450	+	ENST00000504449.1@PCP4L1	ENST00000504449.1	protein_coding	161258727,161283668,161284339	161258983,161283722,161285450	Gene ID= ENSG00000248485.1 TPM= 9.34 Transcript Type= protein_coding
chr1	161314257	161375340	161314257	161375340	+	ENST00000367975.6@SDHC	ENST00000367975.6	protein_coding	161314257,161323614,161328396,161340594,161356677,161362329	161314425,161323670,161328497,161340655,161356840,161375340	Gene ID= ENSG00000143252.14 TPM= 30.36 Transcript Type= protein_coding
chr1	161505430	161519568	161505430	161519568	+	ENST00000271450.10@FCGR2A	ENST00000271450.10	protein_coding	161505430,161505987,161506334,161509820,161510834,161513895,161517975	161505552,161506007,161506591,161510074,161510956,161513932,161519568	Gene ID= ENSG00000143226.13 TPM= 129.99 Transcript Type= protein_coding
chr1	161505430	161518558	161505430	161518558	+	ENST00000367972.8@FCGR2A	ENST00000367972.8	protein_coding	161505430,161505987,161506337,161509820,161510834,161513895,161517975	161505552,161506007,161506591,161510074,161510956,161513932,161518558	Gene ID= ENSG00000143226.13 TPM= 20.23 Transcript Type= protein_coding
chr1	161524540	161526910	161524540	161526910	+	ENST00000309758.5@HSPA6	ENST00000309758.5	protein_coding	161524540	161526910	Gene ID= ENSG00000173110.7 TPM= 8.17 Transcript Type= protein_coding
chr1	161541796	161550591	161541796	161550591	-	ENST00000367967.7@FCGR3A	ENST00000367967.7	protein_coding	161550531,161549697,161549011,161548421,161544701,161541796	161550591,161549780,161549031,161548678,161544958,161543199	Gene ID= ENSG00000203747.10 TPM= 117.93 Transcript Type= protein_coding
chr1	161581339	161600242	161581339	161600242	+	ENST00000543859.5@FCGR2C	ENST00000543859.5	polymorphic_pseudogene	161581339,161588422,161589562,161589600,161591144,161592129,161595553,161599630	161581549,161588442,161589596,161589819,161591398,161592242,161595590,161600242	Gene ID= ENSG00000244682.7 TPM= 2.34 Transcript Type= protein_coding
chr1	161581376	161600237	161581376	161600237	+	transcript10558.chr1.nic@FCGR2C	transcript10558.chr1.nic	polymorphic_pseudogene	161581376,161588422,161589562,161589600,161591144,161592129,161595553	161581549,161588442,161589596,161589819,161591398,161592242,161600237	Gene ID= ENSG00000244682.7 TPM= 2.34 Transcript Type= NA
chr1	161623200	161631462	161623200	161631462	-	ENST00000294800.7@FCGR3B	ENST00000294800.7	protein_coding	161631055,161630368,161629778,161626145,161623200	161631462,161630388,161630035,161626402,161624639	Gene ID= ENSG00000162747.9 TPM= 56.04 Transcript Type= protein_coding
chr1	161663147	161678022	161663147	161678022	+	ENST00000236937.13@FCGR2B	ENST00000236937.13	protein_coding	161663147,161670252,161671392,161672975,161673960,161677328,161677476	161663353,161670272,161671649,161673229,161674073,161677365,161678022	Gene ID= ENSG00000072694.20 TPM= 21.02 Transcript Type= protein_coding
chr1	161663161	161678654	161663161	161678654	+	ENST00000358671.9@FCGR2B	ENST00000358671.9	protein_coding	161663161,161670252,161671392,161672975,161673960,161675257,161677328,161677476	161663353,161670272,161671649,161673229,161674073,161675313,161677365,161678654	Gene ID= ENSG00000072694.20 TPM= 3.5 Transcript Type= protein_coding
chr1	161663192	161678053	161663192	161678053	+	ENST00000480308.5@FCGR2B	ENST00000480308.5	protein_coding	161663192,161670252,161671392,161672975,161673960,161677476	161663353,161670272,161671649,161673229,161677365,161678053	Gene ID= ENSG00000072694.20 TPM= 4.67 Transcript Type= retained_intron
chr1	161749770	161757162	161749770	161757162	+	ENST00000367943.4@DUSP12	ENST00000367943.4	protein_coding	161749770,161751668,161751866,161752368,161753075,161756786	161750145,161751781,161751984,161752464,161753261,161757162	Gene ID= ENSG00000081721.11 TPM= 16.35 Transcript Type= protein_coding
chr1	161920296	161923806	161920296	161923806	-	transcript10586.chr1.nnic@NA	transcript10586.chr1.nnic	NA	161920296	161923806	Gene ID= novel_gene_chr1_10587 TPM= 7.01 Transcript Type= NA
chr1	162395266	162412126	162395266	162412126	-	ENST00000367929.2@SH2D1B	ENST00000367929.2	protein_coding	162411883,162402739,162398923,162395266	162412126,162402802,162399087,162397315	Gene ID= ENSG00000198574.5 TPM= 1.17 Transcript Type= protein_coding
chr1	162561495	162599837	162561495	162599837	+	transcript10601.chr1.nnic@UAP1	transcript10601.chr1.nnic	protein_coding	162561495,162566012,162576777,162579428,162581287,162587475,162588693,162590323,162592732,162596201,162597792,162599271	162561777,162566348,162576981,162579603,162581459,162587668,162588833,162590511,162592782,162596318,162597858,162599837	Gene ID= ENSG00000117143.13 TPM= 2.63 Transcript Type= NA
chr1	162561696	162599837	162561696	162599837	+	transcript10602.chr1.nnic@UAP1	transcript10602.chr1.nnic	protein_coding	162561696,162562473,162566012,162576777,162579428,162581287,162587475,162588693,162590323,162592732,162597792,162599271	162561777,162562584,162566348,162576981,162579603,162581459,162587668,162588833,162590511,162592782,162597858,162599837	Gene ID= ENSG00000117143.13 TPM= 4.67 Transcript Type= NA
chr1	162561511	162599837	162561511	162599837	+	transcript10606.chr1.nnic@UAP1	transcript10606.chr1.nnic	protein_coding	162561511,162562473,162566012,162576777,162579428,162581287,162587475,162588693,162590323,162597792,162599271	162561777,162562584,162566348,162576981,162579603,162581459,162587668,162588833,162590511,162597858,162599837	Gene ID= ENSG00000117143.13 TPM= 3.5 Transcript Type= NA
chr1	162561495	162593761	162561495	162593761	+	transcript10610.chr1.nic@UAP1	transcript10610.chr1.nic	protein_coding	162561495,162566012,162576777,162579428,162581287,162587475,162588693,162590323,162592732	162561777,162566348,162576981,162579603,162581459,162587668,162588833,162590511,162593761	Gene ID= ENSG00000117143.13 TPM= 3.79 Transcript Type= NA
chr1	162561506	162599842	162561506	162599842	+	ENST00000271469.7@UAP1	ENST00000271469.7	protein_coding	162561506,162566012,162576777,162579428,162581287,162587475,162588693,162590323,162592732,162597792,162599271	162561777,162566348,162576981,162579603,162581459,162587668,162588833,162590511,162592782,162597858,162599842	Gene ID= ENSG00000117143.13 TPM= 38.82 Transcript Type= protein_coding
chr1	162561533	162599837	162561533	162599837	+	ENST00000367926.8@UAP1	ENST00000367926.8	protein_coding	162561533,162566012,162576777,162579428,162581287,162587475,162588693,162590323,162597792,162599271	162561777,162566348,162576981,162579603,162581459,162587668,162588833,162590511,162597858,162599837	Gene ID= ENSG00000117143.13 TPM= 21.31 Transcript Type= protein_coding
chr1	162583148	162585552	162583148	162585552	-	transcript10611.chr1.nnic@NA	transcript10611.chr1.nnic	NA	162583148	162585552	Gene ID= novel_gene_chr1_10612 TPM= 5.84 Transcript Type= NA
chr1	162632470	162780421	162632470	162780421	+	ENST00000367921.7@DDR2	ENST00000367921.7	protein_coding	162632470,162655211,162719037,162753095,162754624,162755156,162755664,162759796,162761211,162766001,162767229,162770302,162772024,162773469,162775652,162776136,162778580,162780112	162632631,162655374,162719145,162753197,162754855,162755303,162755769,162759979,162761454,162766063,162767359,162770512,162772247,162773596,162775843,162776370,162778729,162780421	Gene ID= ENSG00000162733.16 TPM= 15.18 Transcript Type= protein_coding
chr1	162790703	162812817	162790703	162812817	+	transcript10624.chr1.nnic@HSD17B7	transcript10624.chr1.nnic	protein_coding	162790703,162792659,162798966,162803431,162804267,162805394,162812298	162790835,162793060,162799937,162803535,162804323,162805492,162812817	Gene ID= ENSG00000132196.13 TPM= 2.34 Transcript Type= NA
chr1	163142304	163203113	163142304	163203113	-	ENST00000313961.9@RGS5	ENST00000313961.9	protein_coding	163202792,163168258,163161915,163152550,163142304	163203113,163168368,163161976,163152716,163147503	Gene ID= ENSG00000143248.12 TPM= 24.52 Transcript Type= protein_coding
chr1	164565751	164570361	164565751	164570361	-	transcript10636.chr1.nnic@NA	transcript10636.chr1.nnic	NA	164565751	164570361	Gene ID= novel_gene_chr1_10637 TPM= 2.34 Transcript Type= NA
chr1	164792492	164851821	164792492	164851821	+	ENST00000540236.3@PBX1	ENST00000540236.3	protein_coding	164792492,164799699,164807542,164811990,164820072,164821537,164846584	164792738,164799889,164807677,164812149,164820184,164821626,164851821	Gene ID= ENSG00000185630.18 TPM= 8.17 Transcript Type= protein_coding
chr1	164792492	164851821	164792492	164851821	+	ENST00000612123.3@PBX1	ENST00000612123.3	protein_coding	164792492,164799699,164807542,164811990,164821537,164846584	164792738,164799889,164807677,164812149,164821626,164851821	Gene ID= ENSG00000185630.18 TPM= 10.51 Transcript Type= protein_coding
chr1	165400917	165445196	165400917	165445196	-	ENST00000359842.9@RXRG	ENST00000359842.9	protein_coding	165444845,165428719,165419870,165417041,165410949,165410702,165409558,165408227,165406812,165400917	165445196,165428966,165420014,165417220,165411109,165410831,165409690,165408318,165406917,165401410	Gene ID= ENSG00000143171.12 TPM= 2.34 Transcript Type= protein_coding
chr1	165631239	165655617	165631239	165655617	+	ENST00000495447.5@MGST3	ENST00000495447.5	protein_coding	165631239,165649755,165651014,165651978,165654279,165655368	165631293,165649964,165651087,165652035,165654351,165655617	Gene ID= ENSG00000143198.12 TPM= 5.84 Transcript Type= retained_intron
chr1	165662216	165698863	165662216	165698863	-	ENST00000354775.4@ALDH9A1	ENST00000354775.4	protein_coding	165698378,165695252,165682981,165682107,165680487,165679442,165669262,165668926,165667309,165665018,165662216	165698863,165695397,165683110,165682241,165680683,165679582,165669450,165669013,165667450,165665130,165663144	Gene ID= ENSG00000143149.12 TPM= 168.13 Transcript Type= protein_coding
chr1	165724293	165768922	165724293	165768922	-	ENST00000612311.4@TMCO1	ENST00000612311.4	protein_coding	165768682,165768192,165759525,165754228,165752102,165743167,165724293	165768922,165768269,165759584,165754274,165752169,165743311,165728121	Gene ID= ENSG00000143183.16 TPM= 3.5 Transcript Type= protein_coding
chr1	165726795	165769180	165726795	165769180	-	ENST00000367881.9@TMCO1	ENST00000367881.9	protein_coding	165768682,165768192,165759525,165754228,165752102,165743167,165726795	165769180,165768269,165759584,165754274,165752169,165743311,165728121	Gene ID= ENSG00000143183.16 TPM= 2.34 Transcript Type= protein_coding
chr1	165727538	165768876	165727538	165768876	-	ENST00000464650.5@TMCO1	ENST00000464650.5	protein_coding	165768759,165768192,165759525,165754228,165752102,165743167,165727538	165768876,165768269,165759584,165754274,165752169,165743311,165728121	Gene ID= ENSG00000143183.16 TPM= 2.34 Transcript Type= protein_coding
chr1	165902595	165911618	165902595	165911618	+	ENST00000479872.5@UCK2	ENST00000479872.5	protein_coding	165902595,165905921,165907684	165903279,165905969,165911618	Gene ID= ENSG00000143179.14 TPM= 9.34 Transcript Type= retained_intron
chr1	166839450	166854471	166839450	166854471	+	transcript10683.chr1.nic@POGK	transcript10683.chr1.nic	protein_coding	166839450,166840955,166846612,166847494,166848938,166852585	166839769,166841088,166846738,166847592,166850423,166854471	Gene ID= ENSG00000143157.11 TPM= 37.36 Transcript Type= NA
chr1	166839508	166854473	166839508	166854473	+	transcript10689.chr1.nic@POGK	transcript10689.chr1.nic	protein_coding	166839508,166840955,166846612,166847494,166848938	166839604,166841088,166846738,166847592,166854473	Gene ID= ENSG00000143157.11 TPM= 11.09 Transcript Type= NA
chr1	166839495	166854471	166839495	166854471	+	transcript10690.chr1.nnic@POGK	transcript10690.chr1.nnic	protein_coding	166839495,166840955,166847494,166848938,166852585	166839604,166841088,166847592,166850423,166854471	Gene ID= ENSG00000143157.11 TPM= 7.59 Transcript Type= NA
chr1	166839492	166854471	166839492	166854471	+	transcript10697.chr1.nnic@POGK	transcript10697.chr1.nnic	protein_coding	166839492,166840955,166848938,166852585	166839604,166841088,166850423,166854471	Gene ID= ENSG00000143157.11 TPM= 9.34 Transcript Type= NA
chr1	166839450	166854471	166839450	166854471	+	transcript10699.chr1.nnic@POGK	transcript10699.chr1.nnic	protein_coding	166839450,166840955,166848938,166852585	166839769,166841088,166850423,166854471	Gene ID= ENSG00000143157.11 TPM= 9.34 Transcript Type= NA
chr1	166839508	166854468	166839508	166854468	+	transcript10701.chr1.nnic@POGK	transcript10701.chr1.nnic	protein_coding	166839508,166840955,166848938	166839604,166841088,166854468	Gene ID= ENSG00000143157.11 TPM= 11.68 Transcript Type= NA
chr1	166839457	166856344	166839457	166856344	+	ENST00000367876.8@POGK	ENST00000367876.8	protein_coding	166839457,166840955,166846612,166847494,166848938,166852585	166839604,166841088,166846738,166847592,166850423,166856344	Gene ID= ENSG00000143157.11 TPM= 12.26 Transcript Type= protein_coding
chr1	166856510	166876327	166856510	166876327	-	ENST00000367874.4@TADA1	ENST00000367874.4	protein_coding	166876160,166869763,166869445,166863824,166862203,166860186,166858119,166856510	166876327,166869854,166869510,166863921,166862412,166860337,166858281,166857719	Gene ID= ENSG00000152382.5 TPM= 28.02 Transcript Type= protein_coding
chr1	166856510	166876263	166856510	166876263	-	transcript10686.chr1.nnic@TADA1	transcript10686.chr1.nnic	protein_coding	166876160,166863824,166862203,166860186,166858119,166856510	166876263,166863921,166862412,166860337,166858281,166857719	Gene ID= ENSG00000152382.5 TPM= 2.34 Transcript Type= NA
chr1	166913205	166917942	166913205	166917942	-	transcript10704.chr1.nnic@NA	transcript10704.chr1.nnic	NA	166913205	166917942	Gene ID= novel_gene_chr1_10705 TPM= 3.5 Transcript Type= NA
chr1	167052836	167090631	167052836	167090631	-	ENST00000367868.3@GPA33	ENST00000367868.3	protein_coding	167090245,167073385,167068922,167063582,167055730,167054976,167052836	167090631,167073539,167069138,167063737,167055849,167055111,167054466	Gene ID= ENSG00000143167.11 TPM= 3.5 Transcript Type= protein_coding
chr1	167220890	167427345	167220890	167427345	+	ENST00000271411.8@POU2F1	ENST00000271411.8	protein_coding	167220890,167303474,167332470,167365467,167370161,167371917,167374108,167376029,167383857,167389588,167396286,167397994,167399186,167401451,167411959,167413026,167415500	167220958,167303574,167332535,167365567,167370214,167372036,167374296,167376155,167383951,167389761,167396427,167398133,167399365,167401556,167412304,167413114,167427345	Gene ID= ENSG00000143190.21 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr1	167220829	167427345	167220829	167427345	+	ENST00000367866.6@POU2F1	ENST00000367866.6	protein_coding	167220829,167332470,167365467,167370161,167371917,167374108,167376029,167383857,167389588,167396286,167397994,167399186,167401451,167411959,167413026,167415500	167220958,167332535,167365567,167370214,167372036,167374296,167376155,167383951,167389761,167396427,167398133,167399365,167401556,167412304,167413114,167427345	Gene ID= ENSG00000143190.21 TPM= 2.34 Transcript Type= protein_coding
chr1	167430640	167518610	167430640	167518610	-	ENST00000392122.3@CD247	ENST00000392122.3	protein_coding	167518408,167440664,167439344,167438570,167435399,167434020,167433024,167430640	167518610,167440767,167439400,167438650,167435431,167434076,167433059,167431746	Gene ID= ENSG00000198821.10 TPM= 3.5 Transcript Type= protein_coding
chr1	167497550	167501125	167497550	167501125	+	transcript10716.chr1.nnic@NA	transcript10716.chr1.nnic	NA	167497550	167501125	Gene ID= novel_gene_chr1_10717 TPM= 2.34 Transcript Type= NA
chr1	167541013	167553767	167541013	167553767	-	ENST00000370509.4@CREG1	ENST00000370509.4	protein_coding	167553388,167548002,167546101,167541013	167553767,167548121,167546285,167542301	Gene ID= ENSG00000143162.7 TPM= 650.35 Transcript Type= protein_coding
chr1	167721993	167773909	167721993	167773909	+	ENST00000465787.5@MPZL1	ENST00000465787.5	protein_coding	167721993,167765583,167772275,167773236	167722242,167765749,167772488,167773909	Gene ID= ENSG00000197965.11 TPM= 1.17 Transcript Type= retained_intron
chr1	167721989	167790819	167721989	167790819	+	ENST00000392121.7@MPZL1	ENST00000392121.7	protein_coding	167721989,167765583,167787820	167722242,167765749,167790819	Gene ID= ENSG00000197965.11 TPM= 24.52 Transcript Type= protein_coding
chr1	167916729	167936040	167916729	167936040	-	ENST00000367846.8@MPC2	ENST00000367846.8	protein_coding	167935733,167924497,167920547,167919979,167916729	167936040,167924537,167920631,167920090,167918359	Gene ID= ENSG00000143158.10 TPM= 17.51 Transcript Type= protein_coding
chr1	167936643	168075834	167936643	168075834	+	transcript10759.chr1.nic@DCAF6	transcript10759.chr1.nic	protein_coding	167936643,167951800,167966629,167974830,167987495,167991204,167993226,168002482,168003870,168004533,168015781,168022988,168038371,168043025,168044585,168044900,168063621,168065590,168066377,168068358,168075371	167937008,167951861,167966721,167975015,167987608,167991339,167993440,168002575,168003989,168004793,168015951,168023047,168038488,168043140,168044671,168045227,168063759,168065746,168066465,168068463,168075834	Gene ID= ENSG00000143164.15 TPM= 2.72 Transcript Type= NA
chr1	167936708	168075834	167936708	168075834	+	ENST00000312263.10@DCAF6	ENST00000312263.10	protein_coding	167936708,167951800,167966629,167974830,167987495,167991204,167993226,168002482,168003870,168004533,168038371,168043025,168044585,168044900,168063621,168065590,168066377,168068358,168075371	167937008,167951861,167966721,167975015,167987608,167991339,167993440,168002575,168003989,168004793,168038488,168043140,168044671,168045227,168063759,168065746,168066465,168068463,168075834	Gene ID= ENSG00000143164.15 TPM= 48.26 Transcript Type= protein_coding
chr1	167936661	168075843	167936661	168075843	+	ENST00000367843.7@DCAF6	ENST00000367843.7	protein_coding	167936661,167951800,167966629,167974830,167987495,167991204,167993226,168002482,168003870,168004533,168022988,168038371,168043025,168044585,168044900,168063621,168065590,168066377,168068358,168075371	167937008,167951861,167966721,167975015,167987608,167991339,167993440,168002575,168003989,168004793,168023047,168038488,168043140,168044671,168045227,168063759,168065746,168066465,168068463,168075843	Gene ID= ENSG00000143164.15 TPM= 19.07 Transcript Type= protein_coding
chr1	168011921	168015109	168011921	168015109	-	transcript10770.chr1.nnic@NA	transcript10770.chr1.nnic	NA	168011921	168015109	Gene ID= novel_gene_chr1_10771 TPM= 2.34 Transcript Type= NA
chr1	168085266	168136938	168085266	168136938	-	transcript10787.chr1.nnic@GPR161	transcript10787.chr1.nnic	protein_coding	168136739,168104477,168096508,168090564,168087585,168085266	168136938,168104894,168097232,168090668,168087704,168085796	Gene ID= ENSG00000143147.14 TPM= 5.84 Transcript Type= NA
chr1	168178923	168202114	168178923	168202114	+	transcript10789.chr1.nnic@TIPRL	transcript10789.chr1.nnic	protein_coding	168178923,168183902,168184779,168191369,168196547,168198919,168199903,168201779	168179181,168184081,168184878,168191500,168196642,168198981,168200704,168202114	Gene ID= ENSG00000143155.12 TPM= 17.51 Transcript Type= NA
chr1	168178923	168200208	168178923	168200208	+	transcript10794.chr1.nic@TIPRL	transcript10794.chr1.nic	protein_coding	168178923,168183902,168184779,168191369,168196547,168198919	168179181,168184081,168184878,168191500,168196642,168200208	Gene ID= ENSG00000143155.12 TPM= 3.5 Transcript Type= NA
chr1	168178933	168202114	168178933	168202114	+	ENST00000367833.6@TIPRL	ENST00000367833.6	protein_coding	168178933,168183902,168184779,168191369,168196547,168198919,168199903	168179181,168184081,168184878,168191500,168196642,168198981,168202114	Gene ID= ENSG00000143155.12 TPM= 8.17 Transcript Type= protein_coding
chr1	168225985	168253021	168225985	168253021	+	transcript10800.chr1.nnic@SFT2D2	transcript10800.chr1.nnic	protein_coding	168225985,168231514,168231834,168235101,168236589,168236712,168239131,168242501,168251305	168226142,168231600,168231919,168235182,168236624,168236770,168239160,168244163,168253021	Gene ID= ENSG00000213064.9 TPM= 3.5 Transcript Type= NA
chr1	168226008	168253025	168226008	168253025	+	ENST00000271375.6@SFT2D2	ENST00000271375.6	protein_coding	168226008,168231514,168231834,168235101,168236589,168236712,168239131,168242501	168226142,168231600,168231919,168235182,168236624,168236770,168239160,168253025	Gene ID= ENSG00000213064.9 TPM= 179.81 Transcript Type= protein_coding
chr1	168225985	168314426	168225985	168314426	+	transcript10799.chr1.nnic@TBX19	transcript10799.chr1.nnic	protein_coding	168225985,168231514,168231834,168291160,168293144,168297724,168300422,168305008,168308742,168312708	168226142,168231600,168231919,168291424,168293278,168297785,168300483,168305196,168308877,168314426	Gene ID= ENSG00000143178.12 TPM= 4.67 Transcript Type= NA
chr1	168245565	168247343	168245565	168247343	-	ENST00000358576.4@ANKRD36BP1	ENST00000358576.4	transcribed_processed_pseudogene	168245565	168247343	Gene ID= ENSG00000214262.4 TPM= 335.1 Transcript Type= processed_transcript
chr1	168695459	168729264	168695459	168729264	-	ENST00000367817.3@DPT	ENST00000367817.3	protein_coding	168728870,168714221,168701017,168695459	168729264,168714346,168701124,168696615	Gene ID= ENSG00000143196.4 TPM= 115.59 Transcript Type= protein_coding
chr1	169106323	169132019	169106323	169132019	+	ENST00000367815.8@ATP1B1	ENST00000367815.8	protein_coding	169106323,169111370,169124884,169127224,169130010,169131292	169106926,169111498,169125039,169127408,169130090,169132019	Gene ID= ENSG00000143153.12 TPM= 16.35 Transcript Type= protein_coding
chr1	169122747	169130807	169122747	169130807	+	transcript10825.chr1.nic@ATP1B1	transcript10825.chr1.nic	protein_coding	169122747,169127224	169125039,169130807	Gene ID= ENSG00000143153.12 TPM= 5.84 Transcript Type= NA
chr1	169116798	169121567	169116798	169121567	-	transcript10827.chr1.nnic@NA	transcript10827.chr1.nnic	NA	169116798	169121567	Gene ID= novel_gene_chr1_10828 TPM= 2.34 Transcript Type= NA
chr1	169132531	169367946	169132531	169367946	-	ENST00000472647.5@NME7	ENST00000472647.5	protein_coding	169367708,169324393,169323117,169309970,169303145,169298556,169287303,169237623,169235131,169230718,169169447,169132531	169367946,169324469,169323283,169310080,169303195,169298763,169287408,169237687,169235199,169230819,169169554,169132817	Gene ID= ENSG00000143156.13 TPM= 1.17 Transcript Type= protein_coding
chr1	169132531	169367967	169132531	169367967	-	ENST00000367811.7@NME7	ENST00000367811.7	protein_coding	169367708,169324393,169323117,169309970,169303145,169298556,169287303,169237623,169235131,169230718,169169447,169132531	169367967,169324500,169323283,169310080,169303195,169298763,169287408,169237687,169235199,169230819,169169554,169132817	Gene ID= ENSG00000143156.13 TPM= 9.34 Transcript Type= protein_coding
chr1	169367970	169388305	169367970	169388305	+	ENST00000367808.7@BLZF1	ENST00000367808.7	protein_coding	169367970,169369473,169376540,169378330,169380481,169382062,169386997	169368342,169369550,169376979,169378529,169380609,169382281,169388305	Gene ID= ENSG00000117475.13 TPM= 28.02 Transcript Type= protein_coding
chr1	169367970	169377383	169367970	169377383	+	ENST00000367807.7@BLZF1	ENST00000367807.7	protein_coding	169367970,169369473,169376540	169368342,169369550,169377383	Gene ID= ENSG00000117475.13 TPM= 1.17 Transcript Type= protein_coding
chr1	169463929	169485961	169463929	169485961	-	transcript10835.chr1.nnic@SLC19A2	transcript10835.chr1.nnic	protein_coding	169485563,169477155,169469964,169468644,169468111,169463929	169485961,169477757,169470186,169468737,169468252,169465977	Gene ID= ENSG00000117479.12 TPM= 2.34 Transcript Type= NA
chr1	169463909	169486003	169463909	169486003	-	ENST00000236137.9@SLC19A2	ENST00000236137.9	protein_coding	169485563,169477155,169469964,169468644,169468111,169463909	169486003,169477757,169470186,169468836,169468252,169465977	Gene ID= ENSG00000117479.12 TPM= 12.84 Transcript Type= protein_coding
chr1	169463929	169485931	169463929	169485931	-	ENST00000367804.4@SLC19A2	ENST00000367804.4	protein_coding	169485563,169469964,169468644,169468111,169463929	169485931,169470186,169468836,169468252,169465977	Gene ID= ENSG00000117479.12 TPM= 1.17 Transcript Type= protein_coding
chr1	169588849	169630154	169588849	169630154	-	transcript10846.chr1.nic@SELP	transcript10846.chr1.nic	protein_coding	169630072,169619129,169617028,169613586,169612929,169612217,169611492,169609504,169606949,169603026,169596991,169595925,169594692,169593605,169591426,169590147,169588849	169630154,169619219,169617414,169613693,169613114,169612402,169611677,169609689,169607134,169603211,169597176,169596134,169594877,169593724,169591456,169590202,169589565	Gene ID= ENSG00000174175.16 TPM= 91.66 Transcript Type= NA
chr1	169588849	169630154	169588849	169630154	-	transcript10847.chr1.nnic@SELP	transcript10847.chr1.nnic	protein_coding	169630072,169619129,169617028,169613586,169612929,169612217,169611492,169609504,169606949,169603026,169596991,169595925,169594692,169593605,169591426,169590147,169588849	169630154,169619219,169617414,169613693,169613114,169612402,169611677,169609689,169607134,169603211,169597176,169596134,169594877,169593724,169591456,169590202,169589869	Gene ID= ENSG00000174175.16 TPM= 10.51 Transcript Type= NA
chr1	169588849	169630154	169588849	169630154	-	transcript10851.chr1.nic@SELP	transcript10851.chr1.nic	protein_coding	169630072,169619129,169617028,169613586,169612929,169612217,169609504,169606949,169603026,169596991,169595925,169594692,169593605,169591426,169590147,169588849	169630154,169619219,169617414,169613693,169613114,169612402,169609689,169607134,169603211,169597176,169596134,169594877,169593724,169591456,169590202,169589565	Gene ID= ENSG00000174175.16 TPM= 5.25 Transcript Type= NA
chr1	169588852	169630112	169588852	169630112	-	ENST00000263686.10@SELP	ENST00000263686.10	protein_coding	169630072,169619129,169617028,169613586,169612929,169612217,169611492,169609504,169606949,169603026,169596991,169595925,169594692,169593605,169591426,169590147,169588852	169630112,169619219,169617414,169613693,169613114,169612402,169611677,169609689,169607134,169603211,169597176,169596134,169594877,169593724,169591456,169590202,169589461	Gene ID= ENSG00000174175.16 TPM= 46.7 Transcript Type= protein_coding
chr1	169690667	169711698	169690667	169711698	-	ENST00000236147.4@SELL	ENST00000236147.4	protein_coding	169711496,169710436,169708417,169707342,169704568,169703255,169701560,169696535,169690667	169711698,169710517,169708803,169707449,169704753,169703440,169701688,169696553,169691802	Gene ID= ENSG00000188404.8 TPM= 16.35 Transcript Type= protein_coding
chr1	169701495	169711698	169701495	169711698	-	ENST00000463108.5@SELL	ENST00000463108.5	protein_coding	169711496,169710436,169708417,169707342,169704568,169703255,169701495	169711698,169710517,169708803,169707449,169704753,169703440,169701688	Gene ID= ENSG00000188404.8 TPM= 1.17 Transcript Type= processed_transcript
chr1	169722641	169734062	169722641	169734062	-	ENST00000333360.11@SELE	ENST00000333360.11	protein_coding	169733971,169733576,169732615,169731835,169730432,169729488,169729186,169728058,169727739,169727349,169726699,169725907,169725729,169722641	169734062,169733660,169732998,169731942,169730617,169729673,169729374,169728246,169727927,169727525,169726806,169725928,169725801,169724509	Gene ID= ENSG00000007908.15 TPM= 5.84 Transcript Type= protein_coding
chr1	169795049	169854080	169795049	169854080	+	ENST00000359326.8@C1orf112	ENST00000359326.8	protein_coding	169795049,169795829,169798857,169800883,169802621,169803169,169804075,169806004,169807791,169821679,169823408,169827051,169827711,169829263,169830259,169830696,169832417,169836927,169842417,169843674,169847690,169849500,169850265,169851817,169852790	169795115,169795983,169798958,169800971,169802725,169803309,169804240,169806088,169807929,169821759,169823472,169827199,169827840,169829449,169830341,169830747,169832506,169837112,169842539,169843769,169847803,169849604,169850345,169851936,169854080	Gene ID= ENSG00000000460.16 TPM= 1.17 Transcript Type= protein_coding
chr1	169792529	169794966	169792529	169794966	-	ENST00000310392.4@METTL18	ENST00000310392.4	protein_coding	169794815,169792529	169794966,169793897	Gene ID= ENSG00000171806.11 TPM= 5.84 Transcript Type= protein_coding
chr1	169921326	170074695	169921326	170074695	-	ENST00000361580.6@KIFAP3	ENST00000361580.6	protein_coding	170074436,170055305,170046712,170039233,170038290,170035454,170034372,170031886,170024418,170016462,169992155,169984582,169983270,169982702,169981972,169978085,169972513,169961046,169954011,169921326	170074695,170055436,170046866,170039288,170038431,170035553,170034496,170031984,170024596,170016624,169992255,169984690,169983382,169982867,169982097,169978183,169972598,169961235,169954110,169921781	Gene ID= ENSG00000075945.12 TPM= 59.55 Transcript Type= protein_coding
chr1	170532129	170553446	170532129	170553446	+	transcript10880.chr1.nic@GORAB	transcript10880.chr1.nic	protein_coding	170532129,170533464,170536310,170539210,170542491,170544705,170552015	170532284,170533651,170536421,170539571,170542592,170544845,170553446	Gene ID= ENSG00000120370.12 TPM= 2.34 Transcript Type= NA
chr1	170532129	170553446	170532129	170553446	+	transcript10881.chr1.nnic@GORAB	transcript10881.chr1.nnic	protein_coding	170532129,170533464,170539210,170542491,170544705,170552015	170532284,170533651,170539571,170542592,170544845,170553446	Gene ID= ENSG00000120370.12 TPM= 2.34 Transcript Type= NA
chr1	170532129	170553446	170532129	170553446	+	ENST00000367763.7@GORAB	ENST00000367763.7	protein_coding	170532129,170539210,170542491,170544705,170552015	170532284,170539567,170542592,170544845,170553446	Gene ID= ENSG00000120370.12 TPM= 7.01 Transcript Type= protein_coding
chr1	170532151	170553446	170532151	170553446	+	ENST00000498166.5@GORAB	ENST00000498166.5	protein_coding	170532151,170533464,170536310,170539210,170542491,170544705,170552015	170532284,170533651,170536421,170539567,170542592,170544845,170553446	Gene ID= ENSG00000120370.12 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr1	170667381	170669425	170667381	170669425	+	ENST00000606154.1@Z97200.1	ENST00000606154.1	lincRNA	170667381	170669425	Gene ID= ENSG00000271811.1 TPM= 1.17 Transcript Type= lincRNA
chr1	171090877	171117819	171090877	171117819	+	ENST00000367755.8@FMO3	ENST00000367755.8	protein_coding	171090877,171092653,171103785,171107675,171108079,171110798,171114007,171116208,171117100	171090981,171092790,171103973,171107837,171108221,171110997,171114362,171116280,171117819	Gene ID= ENSG00000007933.12 TPM= 14.01 Transcript Type= protein_coding
chr1	171314234	171342084	171314234	171342084	+	ENST00000367749.3@FMO4	ENST00000367749.3	protein_coding	171314234,171316186,171319818,171323004,171324138,171331640,171332709,171334411,171337356,171341413	171314413,171316327,171319957,171323192,171324300,171331782,171332908,171334763,171337425,171342084	Gene ID= ENSG00000076258.9 TPM= 1.17 Transcript Type= protein_coding
chr1	171485508	171532775	171485508	171532775	+	transcript10974.chr1.nic@PRRC2C	transcript10974.chr1.nic	protein_coding	171485508,171512032,171512995,171514536,171515734,171517591,171522177,171523221,171523435,171524821,171527791,171532343	171485735,171512200,171513172,171514645,171515859,171517814,171522259,171523354,171523522,171524965,171527844,171532775	Gene ID= ENSG00000117523.15 TPM= 46.7 Transcript Type= NA
chr1	171485551	171532792	171485551	171532792	+	ENST00000476522.5@PRRC2C	ENST00000476522.5	protein_coding	171485551,171512032,171512995,171514536,171515734,171517591,171522177,171523221,171523435,171524821,171527791,171532343	171485735,171512200,171513172,171514630,171515859,171517814,171522259,171523354,171523522,171524965,171527844,171532792	Gene ID= ENSG00000117523.15 TPM= 57.21 Transcript Type= processed_transcript
chr1	171559511	171560849	171559511	171560849	-	transcript10979.chr1.nnic@NA	transcript10979.chr1.nnic	NA	171559511	171560849	Gene ID= novel_gene_chr1_10980 TPM= 8.17 Transcript Type= NA
chr1	171635417	171652683	171635417	171652683	-	ENST00000037502.10@MYOC	ENST00000037502.10	protein_coding	171652008,171638597,171635417	171652683,171638722,171636709	Gene ID= ENSG00000034971.16 TPM= 1.17 Transcript Type= protein_coding
chr1	171700160	171742247	171700160	171742247	-	ENST00000236192.11@VAMP4	ENST00000236192.11	protein_coding	171741910,171738349,171728524,171719171,171710714,171709665,171706367,171700160	171742247,171738463,171728570,171719221,171710814,171709744,171706418,171704534	Gene ID= ENSG00000117533.14 TPM= 26.85 Transcript Type= protein_coding
chr1	171700160	171742083	171700160	171742083	-	transcript10999.chr1.nic@VAMP4	transcript10999.chr1.nic	protein_coding	171741910,171738349,171728524,171719171,171709665,171706367,171700160	171742083,171738463,171728570,171719221,171710814,171706418,171704534	Gene ID= ENSG00000117533.14 TPM= 4.67 Transcript Type= NA
chr1	171703950	171742074	171703950	171742074	-	ENST00000367740.2@VAMP4	ENST00000367740.2	protein_coding	171741910,171738349,171728524,171719171,171710714,171709665,171706367,171703950	171742074,171738463,171728570,171719218,171710814,171709744,171706418,171704534	Gene ID= ENSG00000117533.14 TPM= 4.67 Transcript Type= protein_coding
chr1	171781668	171797717	171781668	171797717	+	transcript11004.chr1.nic@METTL13	transcript11004.chr1.nic	protein_coding	171781668,171781988,171783740,171785879,171787735,171790452,171792017,171794396,171796482	171781795,171782120,171784499,171786078,171787930,171790616,171792235,171794527,171797717	Gene ID= ENSG00000010165.19 TPM= 5.84 Transcript Type= NA
chr1	171781702	171797717	171781702	171797717	+	ENST00000361735.3@METTL13	ENST00000361735.3	protein_coding	171781702,171783740,171785879,171787735,171790452,171792017,171794396,171796482	171782120,171784499,171786078,171787930,171790616,171792235,171794527,171797717	Gene ID= ENSG00000010165.19 TPM= 26.85 Transcript Type= protein_coding
chr1	171841478	172418466	171841478	172418466	+	transcript11019.chr1.nic@DNM3	transcript11019.chr1.nic	protein_coding	171841478,171921748,171987656,171988945,172032402,172033105,172038319,172042009,172044385,172048612,172068819,172081832,172092824,172093696,172131175,172253573,172308728,172379018,172387133,172388573,172418281	171841817,171921821,171987805,171989148,172032500,172033265,172038461,172042144,172044452,172048750,172068905,172081902,172092875,172093725,172131288,172253682,172308839,172379182,172387359,172388809,172418466	Gene ID= ENSG00000197959.13 TPM= 7.01 Transcript Type= NA
chr1	172441457	172444073	172441457	172444073	-	transcript11029.chr1.nnic@PIGC	transcript11029.chr1.nnic	protein_coding	172443988,172441457	172444073,172442853	Gene ID= ENSG00000135845.9 TPM= 2.34 Transcript Type= NA
chr1	172441457	172444060	172441457	172444060	-	ENST00000344529.4@PIGC	ENST00000344529.4	protein_coding	172443988,172441457	172444060,172442830	Gene ID= ENSG00000135845.9 TPM= 54.88 Transcript Type= protein_coding
chr1	172533120	172611833	172533120	172611833	+	transcript11035.chr1.nic@SUCO	transcript11035.chr1.nic	protein_coding	172533120,172551512,172555869,172557280,172557644,172569019,172570047,172570663,172573891,172575518,172577539,172577764,172578298,172579202,172585018,172585858,172588760,172590984,172600064,172602064,172602696,172608747,172609816	172533497,172551626,172556023,172557417,172557794,172569142,172570171,172570730,172573998,172575623,172577559,172577819,172578389,172579267,172585086,172585948,172589926,172591071,172600168,172602218,172602787,172608802,172611833	Gene ID= ENSG00000094975.13 TPM= 9.73 Transcript Type= NA
chr1	172533217	172611831	172533217	172611831	+	ENST00000263688.3@SUCO	ENST00000263688.3	protein_coding	172533217,172551512,172553260,172555869,172557280,172557644,172569019,172570047,172570663,172573891,172575518,172577539,172577764,172578298,172579202,172585018,172585858,172588760,172590984,172600064,172602064,172602696,172608747,172609816	172533497,172551626,172553370,172556023,172557417,172557794,172569142,172570171,172570730,172573998,172575623,172577559,172577819,172578389,172579267,172585086,172585948,172589926,172591071,172600168,172602218,172602787,172608802,172611831	Gene ID= ENSG00000094975.13 TPM= 5.06 Transcript Type= protein_coding
chr1	172659018	172666874	172659018	172666874	+	ENST00000367721.2@FASLG	ENST00000367721.2	protein_coding	172659018,172660095,172664334,172665622	172659549,172660140,172664390,172666874	Gene ID= ENSG00000117560.7 TPM= 4.67 Transcript Type= protein_coding
chr1	173183735	173207313	173183735	173207313	-	ENST00000281834.3@TNFSF4	ENST00000281834.3	protein_coding	173207024,173188521,173183735	173207313,173188569,173186865	Gene ID= ENSG00000117586.10 TPM= 1.17 Transcript Type= protein_coding
chr1	173476506	173477188	173476506	173477188	-	transcript11048.chr1.nnic@NA	transcript11048.chr1.nnic	NA	173476506	173477188	Gene ID= novel_gene_chr1_11049 TPM= 2.34 Transcript Type= NA
chr1	173477266	173488807	173477266	173488807	+	ENST00000340385.5@PRDX6	ENST00000340385.5	protein_coding	173477266,173481326,173485361,173486255,173487735	173477492,173481482,173485507,173486401,173488807	Gene ID= ENSG00000117592.8 TPM= 284.89 Transcript Type= protein_coding
chr1	173714943	173786822	173714943	173786822	+	transcript11059.chr1.nic@KLHL20	transcript11059.chr1.nic	protein_coding	173714943,173715523,173716003,173733713,173751764,173753213,173755923,173756976,173766146,173774305,173775634,173782124,173785163	173715078,173715654,173716066,173734286,173751922,173753307,173756038,173757159,173766289,173774438,173775842,173782230,173786822	Gene ID= ENSG00000076321.10 TPM= 3.5 Transcript Type= NA
chr1	173714937	173786702	173714937	173786702	+	transcript11066.chr1.nic@KLHL20	transcript11066.chr1.nic	protein_coding	173714937,173716003,173733713,173751764,173753213,173755923,173756976,173766146,173774305,173775634,173782124,173785163	173715654,173716066,173734286,173751922,173753307,173756038,173757159,173766289,173774438,173775842,173782230,173786702	Gene ID= ENSG00000076321.10 TPM= 3.5 Transcript Type= NA
chr1	173714931	173766496	173714931	173766496	+	transcript11074.chr1.nic@KLHL20	transcript11074.chr1.nic	protein_coding	173714931,173716003,173733713,173751764,173753213,173755923,173766146	173715078,173716066,173734286,173751922,173753307,173757159,173766496	Gene ID= ENSG00000076321.10 TPM= 2.34 Transcript Type= NA
chr1	173714984	173786702	173714984	173786702	+	ENST00000209884.4@KLHL20	ENST00000209884.4	protein_coding	173714984,173716003,173733713,173751764,173753213,173755923,173756976,173766146,173774305,173775634,173782124,173785163	173715078,173716066,173734286,173751922,173753307,173756038,173757159,173766289,173774438,173775842,173782230,173786702	Gene ID= ENSG00000076321.10 TPM= 9.34 Transcript Type= protein_coding
chr1	173824503	173858546	173824503	173858546	+	ENST00000361951.4@DARS2	ENST00000361951.4	protein_coding	173824503,173826687,173828333,173830660,173831535,173833376,173834473,173836940,173838190,173839367,173840866,173845229,173850327,173853349,173853795,173856666,173857518	173825356,173826786,173828399,173830761,173831630,173833499,173834519,173837046,173838259,173839546,173840973,173845291,173850479,173853567,173853905,173856741,173858546	Gene ID= ENSG00000117593.9 TPM= 8.76 Transcript Type= protein_coding
chr1	173824576	173852018	173824576	173852018	+	transcript11084.chr1.nic@DARS2	transcript11084.chr1.nic	protein_coding	173824576,173826687,173828333,173830660,173831535,173833376,173834473,173836940,173838190,173839367,173840866,173845229,173850327,173851836	173825356,173826786,173828399,173830761,173831630,173833499,173834519,173837046,173838259,173839546,173840973,173845291,173850479,173852018	Gene ID= ENSG00000117593.9 TPM= 4.09 Transcript Type= NA
chr1	173863901	173867987	173863901	173867987	-	ENST00000450589.5@GAS5	ENST00000450589.5	processed_transcript	173867960,173866991,173866761,173866528,173866177,173865857,173865471,173865229,173864675,173864484,173864257,173863901	173867987,173867043,173866796,173866567,173866206,173865894,173865547,173865282,173864704,173864506,173864304,173864075	Gene ID= ENSG00000234741.7 TPM= 50.5 Transcript Type= lincRNA
chr1	173863901	173867991	173863901	173867991	-	transcript11089.chr1.nic@GAS5	transcript11089.chr1.nic	processed_transcript	173867960,173866991,173866761,173866528,173866177,173865857,173865510,173865229,173864675,173864484,173864257,173863901	173867991,173867043,173866796,173866567,173866206,173865894,173865547,173865282,173864704,173864506,173864304,173864075	Gene ID= ENSG00000234741.7 TPM= 37.65 Transcript Type= NA
chr1	173863900	173867989	173863900	173867989	-	ENST00000449289.5@GAS5	ENST00000449289.5	processed_transcript	173867960,173866991,173866761,173866528,173866177,173865857,173865510,173864675,173864484,173864257,173863900	173867989,173867043,173866796,173866567,173866206,173865894,173865547,173864704,173864506,173864304,173864075	Gene ID= ENSG00000234741.7 TPM= 2.63 Transcript Type= lincRNA
chr1	173864144	173867991	173864144	173867991	-	transcript11097.chr1.nic@GAS5	transcript11097.chr1.nic	processed_transcript	173867960,173866991,173866761,173866528,173866177,173865857,173865510,173865229,173864675,173864484,173864144	173867991,173867043,173866796,173866567,173866206,173865894,173865547,173865282,173864704,173864506,173864304	Gene ID= ENSG00000234741.7 TPM= 4.67 Transcript Type= NA
chr1	173863901	173867987	173863901	173867987	-	ENST00000412059.5@GAS5	ENST00000412059.5	processed_transcript	173867960,173866991,173866761,173866528,173866177,173865857,173865471,173865229,173864257,173863901	173867987,173867043,173866796,173866567,173866206,173865894,173865547,173865282,173864704,173864075	Gene ID= ENSG00000234741.7 TPM= 2.63 Transcript Type= retained_intron
chr1	173864144	173867991	173864144	173867991	-	transcript11108.chr1.nic@GAS5	transcript11108.chr1.nic	processed_transcript	173867960,173866991,173866761,173866528,173866177,173865857,173864144	173867991,173867043,173866796,173866567,173866206,173865894,173865547	Gene ID= ENSG00000234741.7 TPM= 3.5 Transcript Type= NA
chr1	174875500	174990409	174875500	174990409	+	transcript11133.chr1.nic@RABGAP1L	transcript11133.chr1.nic	protein_coding	174875500,174877392,174957457,174969277,174976078,174978807,174982834,174988641,174989849	174875713,174877605,174957549,174969387,174976182,174978890,174982905,174988838,174990409	Gene ID= ENSG00000152061.23 TPM= 2.34 Transcript Type= NA
chr1	174875546	174958187	174875546	174958187	+	ENST00000486220.5@RABGAP1L	ENST00000486220.5	protein_coding	174875546,174877392,174957457,174957891	174875713,174877605,174957549,174958187	Gene ID= ENSG00000152061.23 TPM= 2.34 Transcript Type= protein_coding
chr1	174999163	175011715	174999163	175011715	+	ENST00000613570.4@CACYBP	ENST00000613570.4	protein_coding	174999163,175004614,175006745,175007098,175008609,175009923	174999689,175004833,175006841,175007197,175008706,175011715	Gene ID= ENSG00000116161.17 TPM= 2.34 Transcript Type= protein_coding
chr1	174999733	175011710	174999733	175011710	+	ENST00000367679.6@CACYBP	ENST00000367679.6	protein_coding	174999733,175004614,175006745,175007098,175008609,175009923	175000195,175004833,175006841,175007197,175008706,175011710	Gene ID= ENSG00000116161.17 TPM= 37.36 Transcript Type= protein_coding
chr1	175012958	175023425	175012958	175023425	-	ENST00000476371.1@MRPS14	ENST00000476371.1	protein_coding	175023364,175018418,175012958	175023425,175018576,175014851	Gene ID= ENSG00000120333.4 TPM= 10.51 Transcript Type= protein_coding
chr1	175157534	175193081	175157534	175193081	-	transcript11158.chr1.nic@KIAA0040	transcript11158.chr1.nic	protein_coding	175192860,175192640,175166562,175157534	175193081,175192716,175166737,175161146	Gene ID= ENSG00000235750.9 TPM= 2.34 Transcript Type= NA
chr1	175157534	175193119	175157534	175193119	-	transcript11162.chr1.nnic@KIAA0040	transcript11162.chr1.nnic	protein_coding	175192860,175166562,175157534	175193119,175166737,175161146	Gene ID= ENSG00000235750.9 TPM= 3.5 Transcript Type= NA
chr1	175156987	175192793	175156987	175192793	-	ENST00000423313.5@KIAA0040	ENST00000423313.5	protein_coding	175192640,175177611,175166562,175156987	175192793,175177684,175166737,175161146	Gene ID= ENSG00000235750.9 TPM= 7.01 Transcript Type= protein_coding
chr1	175156987	175192943	175156987	175192943	-	ENST00000444639.5@KIAA0040	ENST00000444639.5	protein_coding	175192860,175177611,175166562,175156987	175192943,175177684,175166737,175161146	Gene ID= ENSG00000235750.9 TPM= 5.84 Transcript Type= protein_coding
chr1	175944831	176207493	175944831	176207493	-	ENST00000367669.7@RFWD2	ENST00000367669.7	protein_coding	176206572,176184633,176175910,176163815,176162869,176149006,176136488,176135010,176116624,176085776,176081152,176046181,176043710,176043186,176027572,175989362,175988288,175986943,175947195,175944831	176207493,176184692,176176007,176163891,176162988,176149074,176136547,176135086,176116681,176085890,176081287,176046324,176043818,176043267,176027688,175989479,175988412,175987103,175947239,175945170	Gene ID= ENSG00000143207.19 TPM= 71.52 Transcript Type= protein_coding
chr1	175944831	176207298	175944831	176207298	-	transcript11178.chr1.nic@RFWD2	transcript11178.chr1.nic	protein_coding	176206572,176184633,176175910,176163815,176162869,176149006,176135010,176116624,176085776,176081152,176046181,176043710,176043186,176027572,175989362,175988288,175986943,175947195,175944831	176207298,176184692,176176007,176163891,176162988,176149074,176135086,176116681,176085890,176081287,176046324,176043818,176043267,176027688,175989479,175988412,175987103,175947239,175945170	Gene ID= ENSG00000143207.19 TPM= 17.81 Transcript Type= NA
chr1	176054163	176057745	176054163	176057745	-	transcript11192.chr1.nnic@NA	transcript11192.chr1.nnic	NA	176054163	176057745	Gene ID= novel_gene_chr1_11193 TPM= 2.34 Transcript Type= NA
chr1	176059413	176062071	176059413	176062071	-	transcript11194.chr1.nnic@NA	transcript11194.chr1.nnic	NA	176059413	176062071	Gene ID= novel_gene_chr1_11195 TPM= 2.34 Transcript Type= NA
chr1	178093784	178473516	178093784	178473516	+	transcript11207.chr1.nic@RASAL2	transcript11207.chr1.nic	protein_coding	178093784,178283564,178299992,178390100,178420511,178439422,178441549,178442675,178445518,178451571,178452416,178454447,178456700,178457683,178464278,178465920,178467334,178473075	178094694,178283691,178300118,178390206,178420620,178439575,178441647,178443229,178445662,178451715,178452652,178454648,178456899,178458544,178464412,178466122,178467421,178473516	Gene ID= ENSG00000075391.16 TPM= 3.5 Transcript Type= NA
chr1	178725165	178920103	178725165	178920103	+	ENST00000367635.7@RALGPS2	ENST00000367635.7	protein_coding	178725165,178776682,178784418,178785557,178808045,178811315,178821612,178833424,178877498,178878902,178883466,178885076,178885969,178889642,178892230,178893919,178897664,178902106,178906776,178916330	178725419,178776821,178784522,178785607,178808128,178811404,178821704,178833550,178877635,178878992,178883533,178885211,178886120,178889696,178892307,178894024,178897756,178902211,178906867,178920103	Gene ID= ENSG00000116191.17 TPM= 1.17 Transcript Type= protein_coding
chr1	178725147	178921841	178725147	178921841	+	ENST00000367634.6@RALGPS2	ENST00000367634.6	protein_coding	178725147,178776682,178784418,178785557,178808045,178811315,178821612,178833424,178877498,178878902,178883466,178885076,178885969,178889642,178893919,178897664,178902106,178906776,178916330	178725419,178776821,178784522,178785607,178808128,178811404,178821704,178833550,178877635,178878992,178883533,178885211,178886120,178889696,178894024,178897756,178902211,178906867,178921841	Gene ID= ENSG00000116191.17 TPM= 1.17 Transcript Type= protein_coding
chr1	178850624	178869285	178850624	178869285	-	transcript11219.chr1.nic@ANGPTL1	transcript11219.chr1.nic	protein_coding	178869114,178864954,178853594,178852683,178850624	178869285,178865802,178853787,178852953,178851316	Gene ID= ENSG00000116194.12 TPM= 2.34 Transcript Type= NA
chr1	178849705	178871052	178849705	178871052	-	ENST00000234816.6@ANGPTL1	ENST00000234816.6	protein_coding	178870741,178869114,178864954,178853594,178852683,178849705	178871052,178869223,178865802,178853787,178852953,178851316	Gene ID= ENSG00000116194.12 TPM= 1.17 Transcript Type= protein_coding
chr1	178850624	178871022	178850624	178871022	-	ENST00000367629.1@ANGPTL1	ENST00000367629.1	protein_coding	178870741,178864954,178853594,178852683,178850624	178871022,178865802,178853787,178852953,178851316	Gene ID= ENSG00000116194.12 TPM= 1.17 Transcript Type= protein_coding
chr1	179025896	179076562	179025896	179076562	+	ENST00000263733.4@FAM20B	ENST00000263733.4	protein_coding	179025896,179043715,179050279,179054529,179063927,179064305,179066800,179071913	179026098,179044224,179050365,179054638,179064098,179064496,179066859,179076562	Gene ID= ENSG00000116199.11 TPM= 23.35 Transcript Type= protein_coding
chr1	179081377	179095996	179081377	179095996	+	ENST00000367627.7@TOR3A	ENST00000367627.7	protein_coding	179081377,179082940,179085628,179087911,179094093,179094968	179082387,179083053,179085893,179088089,179094217,179095996	Gene ID= ENSG00000186283.13 TPM= 85.67 Transcript Type= protein_coding
chr1	179082043	179095996	179082043	179095996	+	transcript11232.chr1.nic@TOR3A	transcript11232.chr1.nic	protein_coding	179082043,179082940,179085769,179087911,179094093,179094968	179082387,179083053,179085893,179088089,179094217,179095996	Gene ID= ENSG00000186283.13 TPM= 3.93 Transcript Type= NA
chr1	179082070	179095996	179082070	179095996	+	transcript11233.chr1.nnic@TOR3A	transcript11233.chr1.nnic	protein_coding	179082070,179082785,179085628,179087911,179094093,179094968	179082387,179083053,179085893,179088089,179094217,179095996	Gene ID= ENSG00000186283.13 TPM= 7.44 Transcript Type= NA
chr1	179082043	179095996	179082043	179095996	+	transcript11236.chr1.nic@TOR3A	transcript11236.chr1.nic	protein_coding	179082043,179082940,179087911,179094093,179094968	179082387,179083053,179088089,179094217,179095996	Gene ID= ENSG00000186283.13 TPM= 9.77 Transcript Type= NA
chr1	179082071	179095996	179082071	179095996	+	transcript11237.chr1.nnic@TOR3A	transcript11237.chr1.nnic	protein_coding	179082071,179087911,179094093,179094968	179082387,179088089,179094217,179095996	Gene ID= ENSG00000186283.13 TPM= 3.93 Transcript Type= NA
chr1	179082070	179095996	179082070	179095996	+	transcript11239.chr1.nnic@TOR3A	transcript11239.chr1.nnic	protein_coding	179082070,179094093,179094968	179082387,179094217,179095996	Gene ID= ENSG00000186283.13 TPM= 3.7 Transcript Type= NA
chr1	179351723	179352812	179351723	179352812	-	transcript11259.chr1.nnic@NA	transcript11259.chr1.nnic	NA	179351723	179352812	Gene ID= novel_gene_chr1_11260 TPM= 2.34 Transcript Type= NA
chr1	179843931	179877819	179843931	179877819	-	transcript11262.chr1.nnic@TOR1AIP2	transcript11262.chr1.nnic	protein_coding	179877693,179877239,179865436,179856058,179852632,179850845,179847535,179843931	179877819,179877373,179865854,179856170,179852811,179851363,179847636,179846828	Gene ID= ENSG00000169905.12 TPM= 3.5 Transcript Type= NA
chr1	179843931	179877803	179843931	179877803	-	ENST00000609928.5@TOR1AIP2	ENST00000609928.5	protein_coding	179877693,179877239,179865436,179852632,179850845,179847535,179843931	179877803,179877373,179865854,179852811,179851363,179847636,179846828	Gene ID= ENSG00000169905.12 TPM= 2.34 Transcript Type= protein_coding
chr1	179882042	179919708	179882042	179919708	+	ENST00000528443.6@TOR1AIP1	ENST00000528443.6	protein_coding	179882042,179884692,179889310,179900126,179901302,179903966,179907823,179908605,179913998,179917452	179882977,179884769,179889369,179900167,179901388,179904022,179907864,179908673,179914054,179919708	Gene ID= ENSG00000143337.18 TPM= 9.34 Transcript Type= protein_coding
chr1	179909111	179911406	179909111	179911406	-	transcript11277.chr1.nnic@NA	transcript11277.chr1.nnic	NA	179909111	179911406	Gene ID= novel_gene_chr1_11278 TPM= 2.34 Transcript Type= NA
chr1	179913131	179913256	179913131	179913256	-	transcript11279.chr1.nnic@NA	transcript11279.chr1.nnic	NA	179913131	179913256	Gene ID= novel_gene_chr1_11280 TPM= 2.34 Transcript Type= NA
chr1	179954767	180024552	179954767	180024552	+	transcript11283.chr1.nic@CEP350	transcript11283.chr1.nic	protein_coding	179954767,179986169,179987243,179990507,179992062,179996553,180003174,180006454,180011929,180013847,180015849,180019949,180022698,180024419	179955142,179986254,179987286,179990621,179992221,179997175,180003287,180006567,180012075,180014505,180015970,180021009,180022848,180024552	Gene ID= ENSG00000135837.15 TPM= 3.5 Transcript Type= NA
chr1	180055547	180065606	180055547	180065606	-	transcript11289.chr1.nnic@NA	transcript11289.chr1.nnic	NA	180065118,180062220,180055547	180065606,180062371,180056632	Gene ID= novel_gene_chr1_11290 TPM= 5.84 Transcript Type= NA
chr1	180154828	180198016	180154828	180198016	+	transcript11294.chr1.nic@QSOX1	transcript11294.chr1.nic	protein_coding	180154828,180166491,180175321,180175931,180178794,180182174,180183916,180186053,180189552,180190433,180194213,180196262,180197333	180155172,180166591,180175366,180176033,180178884,180182319,180184050,180186182,180189674,180190580,180194392,180196890,180198016	Gene ID= ENSG00000116260.16 TPM= 53.13 Transcript Type= NA
chr1	180154897	180198034	180154897	180198034	+	ENST00000367600.5@QSOX1	ENST00000367600.5	protein_coding	180154897,180166491,180175321,180175931,180178794,180182174,180183916,180186053,180189552,180190433,180194213,180196262,180197333	180155172,180166591,180175366,180176033,180178884,180182319,180184050,180186182,180189674,180190580,180194392,180196599,180198034	Gene ID= ENSG00000116260.16 TPM= 113.84 Transcript Type= protein_coding
chr1	180196682	180198016	180196682	180198016	+	ENST00000443059.1@QSOX1	ENST00000443059.1	protein_coding	180196682,180197333	180196890,180198016	Gene ID= ENSG00000116260.16 TPM= 1.17 Transcript Type= protein_coding
chr1	180171739	180175167	180171739	180175167	+	transcript11306.chr1.nnic@NA	transcript11306.chr1.nnic	NA	180171739	180175167	Gene ID= novel_gene_chr1_11307 TPM= 2.34 Transcript Type= NA
chr1	180197554	180202689	180197554	180202689	+	transcript11308.chr1.nnic@NA	transcript11308.chr1.nnic	NA	180197554	180202689	Gene ID= novel_gene_chr1_11309 TPM= 4.67 Transcript Type= NA
chr1	180288230	180502621	180288230	180502621	-	transcript11315.chr1.nnic@ACBD6	transcript11315.chr1.nnic	protein_coding	180502045,180495461,180492269,180452325,180430180,180413366,180397516,180314692,180288230	180502621,180495525,180492365,180452393,180430262,180413471,180397605,180314722,180288517	Gene ID= ENSG00000230124.6 TPM= 2.34 Transcript Type= NA
chr1	180288230	180502954	180288230	180502954	-	ENST00000367595.3@ACBD6	ENST00000367595.3	protein_coding	180502045,180495461,180492269,180430180,180413366,180397516,180314692,180288230	180502954,180495525,180492365,180430262,180413471,180397605,180314722,180288517	Gene ID= ENSG00000230124.6 TPM= 25.69 Transcript Type= protein_coding
chr1	180632004	180890251	180632004	180890251	+	ENST00000367590.8@XPR1	ENST00000367590.8	protein_coding	180632004,180682360,180787753,180803388,180806062,180806474,180811407,180824753,180825165,180834874,180836522,180863708,180873803,180880076,180884006	180632270,180682411,180787854,180803611,180806211,180806557,180811488,180824943,180825344,180835045,180836716,180863874,180873942,180880297,180890251	Gene ID= ENSG00000143324.13 TPM= 5.84 Transcript Type= protein_coding
chr1	180972712	181023121	180972712	181023121	-	ENST00000542060.5@STX6	ENST00000542060.5	protein_coding	181022639,180993363,180989984,180988239,180984677,180972712	181023121,180993425,180990109,180988345,180984771,180976646	Gene ID= ENSG00000135823.13 TPM= 1.17 Transcript Type= protein_coding
chr1	181034003	181056553	181034003	181056553	+	ENST00000282990.10@MR1	ENST00000282990.10	protein_coding	181034003,181049052,181050011,181053573,181055225	181034074,181049312,181050286,181053677,181056553	Gene ID= ENSG00000153029.14 TPM= 11.68 Transcript Type= protein_coding
chr1	181034022	181051273	181034022	181051273	+	ENST00000367578.1@MR1	ENST00000367578.1	protein_coding	181034022,181049052,181050011	181034074,181049312,181051273	Gene ID= ENSG00000153029.14 TPM= 1.17 Transcript Type= retained_intron
chr1	181088696	181090836	181088696	181090836	+	transcript11353.chr1.nnic@NA	transcript11353.chr1.nnic	NA	181088696	181090836	Gene ID= novel_gene_chr1_11354 TPM= 123.76 Transcript Type= NA
chr1	182381705	182392206	182381705	182392206	-	ENST00000311223.9@GLUL	ENST00000311223.9	protein_coding	182391679,182390497,182388572,182387131,182386256,182385760,182385357,182381705	182392206,182390852,182388750,182387292,182386402,182385887,182385556,182384723	Gene ID= ENSG00000135821.17 TPM= 6.22 Transcript Type= protein_coding
chr1	182381704	182392206	182381704	182392206	-	ENST00000331872.10@GLUL	ENST00000331872.10	protein_coding	182391679,182388572,182387131,182386256,182385760,182385357,182381704	182392206,182388750,182387292,182386402,182385887,182385556,182384723	Gene ID= ENSG00000135821.17 TPM= 368.28 Transcript Type= protein_coding
chr1	182382894	182391792	182382894	182391792	-	ENST00000339526.8@GLUL	ENST00000339526.8	protein_coding	182390497,182388572,182387131,182386256,182385760,182385357,182382894	182391792,182388750,182387292,182386402,182385887,182385556,182384723	Gene ID= ENSG00000135821.17 TPM= 23.06 Transcript Type= protein_coding
chr1	182382894	182391791	182382894	182391791	-	transcript11368.chr1.nic@GLUL	transcript11368.chr1.nic	protein_coding	182391679,182388572,182387131,182386256,182385357,182382894	182391791,182388750,182387292,182386402,182385887,182384723	Gene ID= ENSG00000135821.17 TPM= 26.56 Transcript Type= NA
chr1	182385499	182390239	182385499	182390239	+	transcript11377.chr1.nnic@NA	transcript11377.chr1.nnic	NA	182385499	182390239	Gene ID= novel_gene_chr1_11378 TPM= 7.01 Transcript Type= NA
chr1	182581474	182589277	182581474	182589277	-	transcript11387.chr1.nic@RNASEL	transcript11387.chr1.nic	protein_coding	182589167,182585327,182584081,182581474	182589277,182586970,182584166,182582258	Gene ID= ENSG00000135828.11 TPM= 4.67 Transcript Type= NA
chr1	182573634	182589256	182573634	182589256	-	ENST00000367559.7@RNASEL	ENST00000367559.7	protein_coding	182589167,182585327,182584081,182582053,182581225,182576256,182573634	182589256,182586970,182584166,182582258,182581357,182576389,182575578	Gene ID= ENSG00000135828.11 TPM= 23.35 Transcript Type= protein_coding
chr1	182598623	182604408	182598623	182604408	-	ENST00000367558.5@RGS16	ENST00000367558.5	protein_coding	182604216,182603229,182602420,182601966,182598623	182604408,182603339,182602484,182602132,182600513	Gene ID= ENSG00000143333.6 TPM= 40.28 Transcript Type= protein_coding
chr1	182598623	182604389	182598623	182604389	-	transcript11390.chr1.nic@RGS16	transcript11390.chr1.nic	protein_coding	182603229,182602420,182601966,182598623	182604389,182602484,182602132,182600513	Gene ID= ENSG00000143333.6 TPM= 6.42 Transcript Type= NA
chr1	182789774	182830132	182789774	182830132	+	transcript11396.chr1.nic@NPL	transcript11396.chr1.nic	protein_coding	182789774,182792232,182794356,182795730,182803698,182806145,182812156,182814783,182816714,182818541,182818813,182822115,182825781,182828724	182789805,182792286,182794439,182795840,182803771,182806232,182812213,182814858,182816806,182818689,182818859,182822199,182825820,182830132	Gene ID= ENSG00000135838.13 TPM= 2.34 Transcript Type= NA
chr1	182789772	182830384	182789772	182830384	+	transcript11408.chr1.nic@NPL	transcript11408.chr1.nic	protein_coding	182789772,182792232,182794356,182803698,182806145,182812156,182814783,182816714,182818541,182818813,182822115,182825781,182828724	182789805,182792286,182794439,182803771,182806232,182812213,182814858,182816806,182818689,182818859,182822199,182825820,182830384	Gene ID= ENSG00000135838.13 TPM= 4.09 Transcript Type= NA
chr1	182789293	182830384	182789293	182830384	+	ENST00000488424.5@NPL	ENST00000488424.5	protein_coding	182789293,182792232,182794356,182803698,182806145,182812156,182814783,182816714,182818541,182818813,182822115,182825781,182829603	182789805,182792286,182794439,182803771,182806232,182812213,182814858,182816806,182818689,182818859,182822199,182825820,182830384	Gene ID= ENSG00000135838.13 TPM= 1.17 Transcript Type= processed_transcript
chr1	182789770	182830384	182789770	182830384	+	transcript11414.chr1.nnic@NPL	transcript11414.chr1.nnic	protein_coding	182789770,182792232,182794356,182803698,182806145,182812156,182814783,182816714,182818541,182818813,182822115,182825781,182828724	182789904,182792286,182794439,182803771,182806232,182812213,182814858,182816806,182818689,182818859,182822199,182825820,182830384	Gene ID= ENSG00000135838.13 TPM= 2.92 Transcript Type= NA
chr1	182789424	182830384	182789424	182830384	+	transcript11418.chr1.nic@NPL	transcript11418.chr1.nic	protein_coding	182789424,182792232,182794356,182803698,182806145,182812156,182814783,182816714,182818541,182818813,182825781,182828724	182789805,182792286,182794439,182803771,182806232,182812213,182814858,182816806,182818689,182818859,182825820,182830384	Gene ID= ENSG00000135838.13 TPM= 3.5 Transcript Type= NA
chr1	182789770	182830132	182789770	182830132	+	transcript11421.chr1.nnic@NPL	transcript11421.chr1.nnic	protein_coding	182789770,182792232,182794356,182803698,182806145,182812156,182814783,182816714,182818541,182818813,182825781,182828724	182789904,182792286,182794439,182803771,182806232,182812213,182814858,182816806,182818689,182818859,182825820,182830132	Gene ID= ENSG00000135838.13 TPM= 3.5 Transcript Type= NA
chr1	182789773	182830384	182789773	182830384	+	transcript11429.chr1.nic@NPL	transcript11429.chr1.nic	protein_coding	182789773,182803698,182806145,182812156,182814783,182816714,182818541,182818813,182825781,182828724	182789805,182803771,182806232,182812213,182814858,182816806,182818689,182818859,182825820,182830384	Gene ID= ENSG00000135838.13 TPM= 2.34 Transcript Type= NA
chr1	182789778	182796186	182789778	182796186	+	transcript11434.chr1.nic@NPL	transcript11434.chr1.nic	protein_coding	182789778,182792232	182789805,182796186	Gene ID= ENSG00000135838.13 TPM= 2.34 Transcript Type= NA
chr1	182839308	182887751	182839308	182887751	+	transcript11435.chr1.nic@DHX9	transcript11435.chr1.nic	protein_coding	182839308,182842545,182843294,182852233,182853306,182854030,182855577,182856532,182858104,182858551,182858733,182859040,182859993,182866444,182866961,182872337,182874854,182876050,182876447,182876830,182878021,182879250,182880497,182881264,182881520,182883139,182883520,182884613,182887083	182839456,182842677,182843434,182852344,182853418,182854178,182855713,182856578,182858240,182858640,182858894,182859117,182860184,182866585,182867043,182872493,182874954,182876263,182876541,182876903,182878173,182879410,182880608,182881425,182881647,182883368,182883635,182884813,182887751	Gene ID= ENSG00000135829.16 TPM= 11.09 Transcript Type= NA
chr1	182839369	182887751	182839369	182887751	+	ENST00000367549.3@DHX9	ENST00000367549.3	protein_coding	182839369,182842545,182843294,182852233,182853306,182854030,182856532,182858104,182858551,182858733,182859040,182859993,182866444,182866961,182872337,182874854,182876050,182876447,182876830,182878021,182879250,182880497,182881264,182881520,182883139,182883520,182884613,182887083	182839456,182842677,182843434,182852344,182853418,182854178,182856578,182858240,182858640,182858894,182859117,182860184,182866585,182867043,182872493,182874954,182876263,182876541,182876903,182878173,182879410,182880608,182881425,182881647,182883368,182883635,182884813,182887751	Gene ID= ENSG00000135829.16 TPM= 82.32 Transcript Type= protein_coding
chr1	183023187	183133445	183023187	183133445	+	transcript11449.chr1.nic@LAMC1	transcript11449.chr1.nic	protein_coding	183023187,183103328,183108276,183110488,183114531,183115520,183116577,183116767,183117320,183117534,183118034,183121723,183122063,183124631,183125397,183126120,183127226,183128594,183130344,183131299,183132400,183133406	183024134,183103632,183108406,183110654,183114719,183115637,183116675,183116903,183117442,183117723,183118146,183121944,183122251,183124876,183125550,183126262,183127404,183128750,183130549,183131378,183132537,183133445	Gene ID= ENSG00000135862.5 TPM= 9.34 Transcript Type= NA
chr1	183023432	183116986	183023432	183116986	+	transcript11451.chr1.nic@LAMC1	transcript11451.chr1.nic	protein_coding	183023432,183103328,183108276,183110488,183114531,183115520,183116577,183116767	183024134,183103632,183108406,183110654,183114719,183115637,183116675,183116986	Gene ID= ENSG00000135862.5 TPM= 2.34 Transcript Type= NA
chr1	183023426	183105246	183023426	183105246	+	transcript11452.chr1.nic@LAMC1	transcript11452.chr1.nic	protein_coding	183023426,183103328	183024134,183105246	Gene ID= ENSG00000135862.5 TPM= 4.67 Transcript Type= NA
chr1	183023460	183145592	183023460	183145592	+	ENST00000258341.4@LAMC1	ENST00000258341.4	protein_coding	183023460,183103328,183108276,183110488,183114531,183115520,183116577,183116767,183117320,183117534,183118034,183121723,183122063,183124631,183125397,183126120,183127226,183128594,183130344,183131299,183132400,183133406,183134660,183135042,183136386,183137669,183140404,183142534	183024134,183103632,183108406,183110654,183114719,183115637,183116675,183116903,183117442,183117723,183118146,183121944,183122251,183124876,183125550,183126262,183127404,183128750,183130549,183131378,183132537,183133550,183134809,183135156,183136585,183137827,183140503,183145592	Gene ID= ENSG00000135862.5 TPM= 60.71 Transcript Type= protein_coding
chr1	183186029	183244562	183186029	183244562	+	transcript11455.chr1.nnic@LAMC2	transcript11455.chr1.nnic	protein_coding	183186029,183186210,183207881,183215453,183218390,183220825,183222089,183223135,183225608,183226698,183227515,183228374,183230961,183232187,183232652,183234367,183235575,183236460,183237352,183238307,183239364,183240040,183240292,183243147	183186114,183186431,183208069,183215588,183218488,183220961,183222211,183223324,183225720,183226916,183227697,183228619,183231103,183232343,183232857,183234446,183235730,183236604,183237504,183238421,183239563,183240198,183240391,183244562	Gene ID= ENSG00000058085.14 TPM= 38.92 Transcript Type= NA
chr1	183186288	183244900	183186288	183244900	+	ENST00000264144.4@LAMC2	ENST00000264144.4	protein_coding	183186288,183207881,183215453,183218390,183220825,183222089,183223135,183225608,183226698,183227515,183228374,183230961,183232187,183232652,183234367,183235575,183236460,183237352,183238307,183239364,183240040,183240292,183243147	183186431,183208069,183215588,183218488,183220961,183222211,183223324,183225720,183226916,183227697,183228619,183231103,183232343,183232857,183234446,183235730,183236604,183237504,183238421,183239563,183240198,183240391,183244900	Gene ID= ENSG00000058085.14 TPM= 20.23 Transcript Type= protein_coding
chr1	183186238	183241261	183186238	183241261	+	ENST00000493293.5@LAMC2	ENST00000493293.5	protein_coding	183186238,183207881,183215453,183218390,183220825,183222089,183223135,183225608,183226698,183227515,183228374,183230961,183232187,183232652,183234367,183235575,183236460,183237352,183238307,183239364,183240040,183240292	183186431,183208069,183215588,183218488,183220961,183222211,183223324,183225720,183226916,183227697,183228619,183231103,183232343,183232857,183234446,183235730,183236604,183237504,183238421,183239563,183240198,183241261	Gene ID= ENSG00000058085.14 TPM= 6.22 Transcript Type= protein_coding
chr1	183472478	183554193	183472478	183554193	+	ENST00000367537.7@SMG7	ENST00000367537.7	protein_coding	183472478,183502253,183512837,183515874,183517688,183526596,183527956,183528892,183529398,183533164,183533676,183537145,183538380,183540984,183542076,183544353,183544930,183545966,183547103,183549208,183549764,183550751,183551045,183551818	183472649,183502391,183512868,183515991,183517820,183526767,183528027,183529042,183529533,183533326,183533832,183537215,183538440,183541103,183542364,183544497,183545312,183546337,183547252,183549288,183549923,183550921,183551190,183554193	Gene ID= ENSG00000116698.21 TPM= 8.76 Transcript Type= protein_coding
chr1	183472527	183554190	183472527	183554190	+	ENST00000515829.6@SMG7	ENST00000515829.6	protein_coding	183472527,183512837,183515874,183517688,183526596,183527956,183528892,183529398,183533164,183533676,183537145,183538380,183540984,183542076,183544353,183544930,183545966,183549208,183549764,183550751,183551045,183551818	183472649,183512868,183515991,183517820,183526767,183528027,183529042,183529533,183533326,183533832,183537215,183538440,183541103,183542364,183544497,183545312,183546337,183549288,183549923,183550921,183551190,183554190	Gene ID= ENSG00000116698.21 TPM= 22.77 Transcript Type= protein_coding
chr1	183555563	183590624	183555563	183590624	-	transcript11479.chr1.nnic@NCF2	transcript11479.chr1.nnic	protein_coding	183590156,183586895,183577599,183574487,183570780,183569142,183567204,183566920,183565704,183564005,183563434,183563195,183560096,183555563	183590624,183586977,183577707,183574621,183570839,183569185,183567345,183566988,183565779,183564030,183563585,183563306,183560273,183556230	Gene ID= ENSG00000116701.14 TPM= 19.85 Transcript Type= NA
chr1	183555563	183590876	183555563	183590876	-	ENST00000367536.5@NCF2	ENST00000367536.5	protein_coding	183590840,183590156,183586895,183577599,183574487,183573185,183570780,183569142,183567204,183566920,183565704,183564005,183563434,183563195,183560096,183555563	183590876,183590359,183586977,183577707,183574621,183573292,183570839,183569185,183567345,183566988,183565779,183564030,183563585,183563306,183560273,183556230	Gene ID= ENSG00000116701.14 TPM= 32.11 Transcript Type= protein_coding
chr1	183555725	183590581	183555725	183590581	-	ENST00000367535.7@NCF2	ENST00000367535.7	protein_coding	183590156,183586895,183577599,183574487,183573185,183570780,183569142,183567204,183566920,183565704,183564005,183563434,183563195,183560096,183555725	183590581,183586977,183577707,183574621,183573292,183570839,183569185,183567345,183566988,183565779,183564030,183563585,183563306,183560273,183556230	Gene ID= ENSG00000116701.14 TPM= 8.47 Transcript Type= protein_coding
chr1	183624160	183628200	183624160	183628200	+	transcript11490.chr1.nnic@NA	transcript11490.chr1.nnic	NA	183624160	183628200	Gene ID= novel_gene_chr1_11491 TPM= 23.35 Transcript Type= NA
chr1	183805120	183928531	183805120	183928531	+	ENST00000360851.3@RGL1	ENST00000360851.3	protein_coding	183805120,183806375,183847566,183865996,183880616,183883786,183884723,183888474,183892077,183897808,183900150,183902568,183904850,183907012,183912082,183916447,183922222,183926105	183805324,183806485,183847774,183866073,183880800,183883910,183884938,183888577,183892161,183897897,183900236,183902600,183904971,183907101,183912268,183916701,183922336,183928531	Gene ID= ENSG00000143344.15 TPM= 57.21 Transcript Type= protein_coding
chr1	183806572	183808390	183806572	183808390	-	transcript11501.chr1.nnic@NA	transcript11501.chr1.nnic	NA	183806572	183808390	Gene ID= novel_gene_chr1_11502 TPM= 3.5 Transcript Type= NA
chr1	183935837	184037729	183935837	184037729	-	ENST00000361927.8@COLGALT2	ENST00000361927.8	protein_coding	184037095,183978410,183975097,183973616,183969269,183963901,183954762,183951007,183945432,183944196,183940581,183935837	184037729,183978520,183975214,183973750,183969473,183964020,183954838,183951113,183945564,183944323,183940787,183939037	Gene ID= ENSG00000198756.10 TPM= 12.84 Transcript Type= protein_coding
chr1	183944032	184037503	183944032	184037503	-	transcript11506.chr1.nic@COLGALT2	transcript11506.chr1.nic	protein_coding	184037095,183978410,183975097,183973616,183969269,183963901,183954762,183951007,183945432,183944032	184037503,183978520,183975214,183973750,183969473,183964020,183954838,183951113,183945564,183944323	Gene ID= ENSG00000198756.10 TPM= 2.34 Transcript Type= NA
chr1	184051709	184095842	184051709	184095842	+	transcript11515.chr1.nnic@TSEN15	transcript11515.chr1.nnic	protein_coding	184051709,184054354,184054728,184095690	184051890,184054435,184054863,184095842	Gene ID= ENSG00000198860.11 TPM= 4.67 Transcript Type= NA
chr1	184051677	184074212	184051677	184074212	+	ENST00000361641.5@TSEN15	ENST00000361641.5	protein_coding	184051677,184054354,184054728,184072157,184072827	184051890,184054435,184054863,184072298,184074212	Gene ID= ENSG00000198860.11 TPM= 30.94 Transcript Type= protein_coding
chr1	184051746	184074206	184051746	184074206	+	ENST00000423085.6@TSEN15	ENST00000423085.6	protein_coding	184051746,184054354,184054728,184072827	184051890,184054435,184054863,184074206	Gene ID= ENSG00000198860.11 TPM= 15.76 Transcript Type= protein_coding
chr1	184690503	184754887	184690503	184754887	-	transcript11526.chr1.nic@EDEM3	transcript11526.chr1.nic	protein_coding	184754489,184749547,184737611,184737025,184734531,184732837,184726255,184723751,184721289,184719443,184719162,184717540,184716888,184712433,184711723,184710394,184708153,184706643,184702811,184694044,184690503	184754887,184749592,184737711,184737064,184734643,184732990,184726389,184723856,184721386,184719568,184719245,184717623,184717012,184712598,184711877,184710547,184708344,184706808,184702996,184694472,184693432	Gene ID= ENSG00000116406.18 TPM= 2.92 Transcript Type= NA
chr1	184690231	184754913	184690231	184754913	-	ENST00000318130.12@EDEM3	ENST00000318130.12	protein_coding	184754489,184749547,184737611,184737025,184734531,184732837,184726255,184723751,184721289,184719443,184719162,184717540,184716888,184712433,184711723,184710394,184708153,184706643,184702811,184690231	184754913,184749592,184737711,184737064,184734643,184732990,184726389,184723856,184721386,184719568,184719245,184717623,184717012,184712598,184711877,184710547,184708344,184706808,184702996,184694472	Gene ID= ENSG00000116406.18 TPM= 43.78 Transcript Type= protein_coding
chr1	184791030	184974550	184791030	184974550	-	ENST00000367511.3@FAM129A	ENST00000367511.3	protein_coding	184974302,184899179,184894075,184890108,184884633,184831847,184823638,184823167,184818638,184808074,184805946,184803585,184798079,184791030	184974550,184899309,184894206,184890222,184884800,184831962,184823742,184823329,184818825,184808235,184806056,184803692,184798190,184796097	Gene ID= ENSG00000135842.16 TPM= 29.19 Transcript Type= protein_coding
chr1	185118098	185156981	185118098	185156981	-	ENST00000367506.9@TRMT1L	ENST00000367506.9	protein_coding	185156478,185151825,185150379,185147182,185145439,185143906,185143357,185139973,185139367,185137606,185128669,185124944,185123857,185120383,185118098	185156981,185151935,185150492,185147246,185145568,185144029,185143436,185140222,185139579,185137796,185128747,185125110,185123919,185120509,185120271	Gene ID= ENSG00000121486.11 TPM= 4.67 Transcript Type= protein_coding
chr1	185157159	185291765	185157159	185291765	+	ENST00000367500.8@SWT1	ENST00000367500.8	protein_coding	185157159,185160833,185166572,185168340,185174372,185180391,185181946,185184243,185184743,185190549,185202654,185204700,185206625,185214507,185221849,185231577,185271323,185276604,185290674	185157314,185160925,185166652,185168398,185175113,185180450,185182057,185184344,185184931,185190642,185202799,185204863,185206763,185214655,185222036,185231708,185271389,185276668,185291765	Gene ID= ENSG00000116668.12 TPM= 5.84 Transcript Type= protein_coding
chr1	185157517	185172536	185157517	185172536	+	transcript11558.chr1.nnic@SWT1	transcript11558.chr1.nnic	protein_coding	185157517,185160833,185166572,185168340,185169800	185157626,185160925,185166652,185168398,185172536	Gene ID= ENSG00000116668.12 TPM= 2.34 Transcript Type= NA
chr1	185296388	185317329	185296388	185317329	-	ENST00000367498.7@IVNS1ABP	ENST00000367498.7	protein_coding	185316953,185311095,185309383,185309003,185308800,185307489,185307014,185305536,185301434,185300972,185300437,185300217,185299999,185299710,185296388	185317329,185311322,185309511,185309172,185308875,185307662,185307139,185305643,185301563,185301196,185300558,185300343,185300130,185299883,185298288	Gene ID= ENSG00000116679.15 TPM= 58.85 Transcript Type= protein_coding
chr1	186307529	186314562	186307529	186314562	+	transcript11613.chr1.nic@PRG4	transcript11613.chr1.nic	protein_coding	186307529,186309793,186311034,186311440,186312175,186312769,186313681	186309140,186309870,186311170,186311596,186312372,186312894,186314562	Gene ID= ENSG00000116690.12 TPM= 5.06 Transcript Type= NA
chr1	186355523	186375734	186355523	186375734	-	transcript11595.chr1.nic@TPR	transcript11595.chr1.nic	protein_coding	186375559,186374878,186373359,186370970,186367886,186363342,186362837,186362288,186361789,186361622,186360765,186360273,186359799,186358543,186357397,186356286,186355635,186355523	186375734,186375186,186373463,186371043,186367982,186363445,186363001,186362380,186361869,186361709,186360905,186360364,186359996,186358650,186357623,186356449,186355768,186355558	Gene ID= ENSG00000047410.13 TPM= 9.14 Transcript Type= NA
chr1	186355523	186375354	186355523	186375354	-	transcript11596.chr1.nic@TPR	transcript11596.chr1.nic	protein_coding	186374878,186373359,186370970,186367886,186363342,186362837,186362288,186361789,186361622,186360765,186360273,186359799,186358543,186357397,186356286,186355635,186355523	186375354,186373463,186371043,186367982,186363445,186363001,186362380,186361869,186361709,186360905,186360364,186359996,186358650,186357623,186356449,186355768,186355558	Gene ID= ENSG00000047410.13 TPM= 13.63 Transcript Type= NA
chr1	186355523	186375354	186355523	186375354	-	transcript11598.chr1.nic@TPR	transcript11598.chr1.nic	protein_coding	186374878,186373359,186370970,186367886,186363342,186362837,186362288,186361789,186361622,186360765,186360273,186359799,186358543,186356286,186355635,186355523	186375354,186373463,186371043,186367982,186363445,186363001,186362380,186361869,186361709,186360905,186360364,186359996,186358650,186357623,186355768,186355558	Gene ID= ENSG00000047410.13 TPM= 3.89 Transcript Type= NA
chr1	186355523	186375231	186355523	186375231	-	transcript11606.chr1.nic@TPR	transcript11606.chr1.nic	protein_coding	186374878,186373359,186370970,186367886,186363342,186362837,186362288,186360765,186360273,186359799,186358543,186355635,186355523	186375231,186373463,186371043,186367982,186363445,186363001,186362380,186361869,186360364,186359996,186358650,186357623,186355558	Gene ID= ENSG00000047410.13 TPM= 2.34 Transcript Type= NA
chr1	186375869	186421378	186375869	186421378	+	ENST00000287859.10@C1orf27	ENST00000287859.10	protein_coding	186375869,186379767,186383022,186385988,186388442,186389588,186390711,186391696,186393947,186398313,186398954,186406083,186417544,186419009	186375974,186379884,186383156,186386083,186388548,186389624,186390851,186391791,186394015,186398441,186399044,186406268,186417654,186421378	Gene ID= ENSG00000157181.15 TPM= 28.02 Transcript Type= protein_coding
chr1	186671791	186680427	186671791	186680427	-	ENST00000367468.9@PTGS2	ENST00000367468.9	protein_coding	186680239,186679322,186679058,186678261,186677649,186676833,186676467,186675898,186675249,186671791	186680427,186679438,186679201,186678404,186677830,186676916,186676713,186676184,186675396,186674762	Gene ID= ENSG00000073756.11 TPM= 21.02 Transcript Type= protein_coding
chr1	186680622	186681446	186680622	186681446	+	ENST00000608917.1@PACERR	ENST00000608917.1	lincRNA	186680622	186681446	Gene ID= ENSG00000273129.1 TPM= 1.17 Transcript Type= lincRNA
chr1	186828953	186988981	186828953	186988981	+	ENST00000367466.3@PLA2G4A	ENST00000367466.3	protein_coding	186828953,186854286,186870435,186893011,186894098,186906965,186911248,186932763,186939008,186939980,186946637,186946869,186950657,186956102,186965409,186977593,186979315,186988377	186829035,186854387,186870516,186893159,186894211,186907002,186911389,186932899,186939230,186940094,186946774,186946961,186950728,186956344,186965593,186977788,186979472,186988981	Gene ID= ENSG00000116711.9 TPM= 17.51 Transcript Type= protein_coding
chr1	190097662	190474875	190097662	190474875	-	transcript11621.chr1.nic@BRINP3	transcript11621.chr1.nic	protein_coding	190474408,190454655,190281560,190264865,190234372,190226082,190160668,190097662	190474875,190454940,190281750,190265055,190234477,190226318,190160890,190099134	Gene ID= ENSG00000162670.10 TPM= 2.34 Transcript Type= NA
chr1	192158457	192185815	192158457	192185815	+	ENST00000367460.3@RGS18	ENST00000367460.3	protein_coding	192158457,192159220,192160378,192181292,192184297	192158756,192159321,192160439,192181458,192185815	Gene ID= ENSG00000150681.9 TPM= 2.34 Transcript Type= protein_coding
chr1	192575727	192580031	192575727	192580031	+	ENST00000367459.7@RGS1	ENST00000367459.7	protein_coding	192575727,192576285,192576774,192578222,192579137	192575929,192576365,192576835,192578385,192580031	Gene ID= ENSG00000090104.11 TPM= 5.84 Transcript Type= protein_coding
chr1	192636104	192641202	192636104	192641202	+	transcript11630.chr1.nic@RGS13	transcript11630.chr1.nic	protein_coding	192636104,192637590	192636317,192641202	Gene ID= ENSG00000127074.14 TPM= 2.34 Transcript Type= NA
chr1	192636145	192660260	192636145	192660260	+	ENST00000462955.1@RGS13	ENST00000462955.1	protein_coding	192636145,192637590,192644331,192647926,192658201,192659338	192636317,192637660,192644399,192647987,192658367,192660260	Gene ID= ENSG00000127074.14 TPM= 3.5 Transcript Type= processed_transcript
chr1	192636145	192660260	192636145	192660260	+	ENST00000391995.6@RGS13	ENST00000391995.6	protein_coding	192636145,192637590,192638164,192644331,192647926,192658201,192659338	192636317,192637660,192638203,192644399,192647987,192658367,192660260	Gene ID= ENSG00000127074.14 TPM= 1.17 Transcript Type= protein_coding
chr1	192809041	192812283	192809041	192812283	+	ENST00000235382.6@RGS2	ENST00000235382.6	protein_coding	192809041,192810166,192810370,192810981,192811402	192809181,192810267,192810431,192811147,192812283	Gene ID= ENSG00000116741.7 TPM= 22.18 Transcript Type= protein_coding
chr1	193012250	193059496	193012250	193059496	-	ENST00000367455.8@UCHL5	ENST00000367455.8	protein_coding	193059185,193051754,193049746,193029532,193029388,193029179,193028085,193023844,193022926,193021097,193012250	193059496,193051817,193049851,193029657,193029449,193029309,193028148,193023946,193023039,193021195,193016395	Gene ID= ENSG00000116750.13 TPM= 1.17 Transcript Type= protein_coding
chr1	193015759	193059496	193015759	193059496	-	ENST00000367454.5@UCHL5	ENST00000367454.5	protein_coding	193059185,193051754,193049746,193029532,193029388,193029179,193028085,193023844,193022926,193021097,193015759	193059496,193051817,193049851,193029657,193029449,193029309,193028148,193023946,193023036,193021195,193016395	Gene ID= ENSG00000116750.13 TPM= 1.17 Transcript Type= protein_coding
chr1	193018405	193059361	193018405	193059361	-	ENST00000367448.5@UCHL5	ENST00000367448.5	protein_coding	193059185,193051754,193049746,193029532,193029388,193029179,193028085,193023844,193022926,193021097,193020307,193018405	193059361,193051817,193049851,193029657,193029449,193029309,193028148,193023946,193023036,193021195,193020381,193018820	Gene ID= ENSG00000116750.13 TPM= 1.17 Transcript Type= protein_coding
chr1	193018405	193059409	193018405	193059409	-	ENST00000367449.5@UCHL5	ENST00000367449.5	protein_coding	193059185,193051754,193049746,193029532,193029388,193029179,193028085,193023844,193022926,193021097,193018405	193059409,193051817,193049851,193029657,193029449,193029309,193028148,193023946,193023036,193021195,193018820	Gene ID= ENSG00000116750.13 TPM= 1.17 Transcript Type= protein_coding
chr1	193059585	193084881	193059585	193084881	+	transcript11666.chr1.nic@TROVE2	transcript11666.chr1.nic	protein_coding	193059585,193069034,193070554,193075820,193076501,193076913,193081364,193082186,193082562,193084579	193059776,193069634,193070619,193076040,193076647,193077050,193081480,193082299,193082708,193084881	Gene ID= ENSG00000116747.12 TPM= 3.5 Transcript Type= NA
chr1	193059508	193085985	193059508	193085985	+	transcript11669.chr1.nic@TROVE2	transcript11669.chr1.nic	protein_coding	193059508,193059874,193069034,193075820,193076501,193076913,193081364,193082186,193082562,193084579	193059776,193060222,193069634,193076040,193076647,193077050,193081480,193082299,193082708,193085985	Gene ID= ENSG00000116747.12 TPM= 2.34 Transcript Type= NA
chr1	193059422	193084881	193059422	193084881	+	ENST00000400968.6@TROVE2	ENST00000400968.6	protein_coding	193059422,193069034,193075820,193076501,193076913,193081364,193082186,193082562,193084579	193059776,193069634,193076040,193076647,193077050,193081480,193082299,193082708,193084881	Gene ID= ENSG00000116747.12 TPM= 22.77 Transcript Type= protein_coding
chr1	193088583	193091771	193088583	193091771	+	transcript11680.chr1.nnic@NA	transcript11680.chr1.nnic	NA	193088583	193091771	Gene ID= novel_gene_chr1_11681 TPM= 8.17 Transcript Type= NA
chr1	193090863	193092721	193090863	193092721	-	transcript11682.chr1.nnic@NA	transcript11682.chr1.nnic	NA	193090863	193092721	Gene ID= novel_gene_chr1_11683 TPM= 2.34 Transcript Type= NA
chr1	193096468	193105431	193096468	193105431	-	ENST00000367439.7@GLRX2	ENST00000367439.7	protein_coding	193105264,193101141,193097584,193096468	193105431,193101204,193097760,193096759	Gene ID= ENSG00000023572.8 TPM= 9.34 Transcript Type= protein_coding
chr1	193122142	193162929	193122142	193162929	+	transcript11695.chr1.nnic@CDC73	transcript11695.chr1.nnic	protein_coding	193122142,193125112,193130174,193135391,193135537,193138085,193141850,193147867,193150304,193152380,193161123	193122331,193125217,193130243,193135453,193135589,193138173,193142066,193147965,193150382,193152444,193162929	Gene ID= ENSG00000134371.10 TPM= 3.5 Transcript Type= NA
chr1	193122017	193253901	193122017	193253901	+	ENST00000367435.3@CDC73	ENST00000367435.3	protein_coding	193122017,193125112,193130174,193135391,193135537,193138085,193141850,193147867,193150304,193152380,193203795,193212065,193212390,193232993,193236256,193249730,193250676	193122331,193125217,193130243,193135453,193135589,193138173,193142066,193147965,193150382,193152444,193203852,193212100,193212477,193233154,193236356,193249871,193253901	Gene ID= ENSG00000134371.10 TPM= 17.51 Transcript Type= protein_coding
chr1	193179045	193186654	193179045	193186654	-	ENST00000367434.4@B3GALT2	ENST00000367434.4	protein_coding	193186019,193179045	193186654,193181682	Gene ID= ENSG00000162630.5 TPM= 7.01 Transcript Type= protein_coding
chr1	196651878	196747504	196651878	196747504	+	ENST00000367429.8@CFH	ENST00000367429.8	protein_coding	196651878,196672978,196673857,196675989,196677476,196679623,196685064,196689420,196690063,196713735,196715593,196725121,196726470,196726761,196728346,196736824,196737475,196740619,196741875,196743452,196745817,196747111	196652175,196673163,196673962,196676065,196677667,196679793,196685237,196689614,196690239,196713917,196715769,196725297,196726652,196726940,196728522,196737006,196737660,196740792,196742051,196743628,196745999,196747504	Gene ID= ENSG00000000971.15 TPM= 42.62 Transcript Type= protein_coding
chr1	196652045	196701566	196652045	196701566	+	ENST00000630130.2@CFH	ENST00000630130.2	protein_coding	196652045,196672978,196673857,196675989,196677476,196679623,196685064,196689420,196690063,196701318	196652175,196673163,196673962,196676065,196677667,196679793,196685237,196689614,196690239,196701566	Gene ID= ENSG00000000971.15 TPM= 12.26 Transcript Type= protein_coding
chr1	197153680	197201297	197153680	197201297	-	transcript11728.chr1.nnic@ZBTB41	transcript11728.chr1.nnic	protein_coding	197201223,197199354,197191692,197190762,197188292,197180988,197178417,197176564,197175010,197172160,197153680	197201297,197200590,197191899,197190831,197188439,197181117,197178512,197176670,197175115,197172248,197160014	Gene ID= ENSG00000177888.7 TPM= 9.34 Transcript Type= NA
chr1	197509644	197775572	197509644	197775572	-	transcript11736.chr1.nic@DENND1B	transcript11736.chr1.nic	protein_coding	197775139,197772868,197715031,197674120,197672037,197658300,197652235,197645690,197642711,197617659,197611931,197607073,197595208,197583152,197553022,197546733,197545922,197540959,197539964,197512871,197511728,197509644	197775572,197772932,197715074,197674169,197672156,197658369,197652315,197645743,197642821,197617759,197611976,197607174,197595333,197583253,197553112,197546773,197545990,197541015,197540071,197512953,197511944,197510972	Gene ID= ENSG00000213047.12 TPM= 14.01 Transcript Type= NA
chr1	197902647	197907367	197902647	197907367	+	ENST00000367393.7@C1orf53	ENST00000367393.7	protein_coding	197902647,197905796,197907149	197902913,197905897,197907367	Gene ID= ENSG00000203724.10 TPM= 2.34 Transcript Type= protein_coding
chr1	197917399	197935476	197917399	197935476	+	ENST00000367387.5@LHX9	ENST00000367387.5	protein_coding	197917399,197919972,197921304,197927591,197929002	197917997,197920174,197921659,197927793,197935476	Gene ID= ENSG00000143355.15 TPM= 1.17 Transcript Type= protein_coding
chr1	198156989	198322420	198156989	198322420	+	transcript11750.chr1.nic@NEK7	transcript11750.chr1.nic	protein_coding	198156989,198220999,198232553,198253040,198262575,198264125,198277961,198278954,198292945,198297127,198319412	198157276,198221110,198232637,198253180,198262637,198264235,198278069,198279061,198293039,198297240,198322420	Gene ID= ENSG00000151414.14 TPM= 12.84 Transcript Type= NA
chr1	198156963	198322420	198156963	198322420	+	ENST00000367385.8@NEK7	ENST00000367385.8	protein_coding	198156963,198232553,198253040,198262575,198264125,198277961,198278954,198292945,198297127,198319412	198157276,198232637,198253180,198262637,198264235,198278069,198279061,198293039,198297240,198322420	Gene ID= ENSG00000151414.14 TPM= 316.42 Transcript Type= protein_coding
chr1	198639081	198757201	198639081	198757201	+	transcript11768.chr1.nic@PTPRC	transcript11768.chr1.nic	protein_coding	198639081,198639226,198692347,198699564,198702387,198703298,198704472,198706734,198708133,198709687,198712953,198716682,198718094,198722416,198728340,198729137,198731617,198732300,198732480,198734196,198734328,198735127,198741869,198742232,198744054,198748109,198749416,198750492,198752249,198752594,198754269,198755906	198639137,198639341,198692373,198699704,198702530,198703372,198704498,198706952,198708261,198709824,198713072,198716840,198718302,198722476,198728448,198729171,198731726,198732390,198732556,198734232,198734425,198735252,198742026,198742367,198744203,198748199,198749549,198750626,198752371,198752772,198754404,198757201	Gene ID= ENSG00000081237.18 TPM= 7.59 Transcript Type= NA
chr1	198639025	198757283	198639025	198757283	+	transcript11773.chr1.nic@PTPRC	transcript11773.chr1.nic	protein_coding	198639025,198639226,198692347,198699564,198703298,198704472,198706734,198708133,198709687,198712953,198716682,198718094,198722416,198728340,198729137,198731617,198732300,198732480,198734196,198734328,198735127,198741869,198742232,198744054,198748109,198749416,198750492,198752249,198752594,198754269,198755906	198639137,198639341,198692373,198699704,198703372,198704498,198706952,198708261,198709824,198713072,198716840,198718302,198722476,198728448,198729171,198731726,198732390,198732556,198734232,198734425,198735252,198742026,198742367,198744203,198748199,198749549,198750626,198752371,198752772,198754404,198757283	Gene ID= ENSG00000081237.18 TPM= 7.59 Transcript Type= NA
chr1	198639095	198757283	198639095	198757283	+	ENST00000348564.10@PTPRC	ENST00000348564.10	protein_coding	198639095,198639226,198692347,198703298,198704472,198706734,198708133,198709687,198712953,198716682,198718094,198722416,198728340,198729137,198731617,198732300,198732480,198734196,198734328,198735127,198741869,198742232,198744054,198748109,198749416,198750492,198752249,198752594,198754269,198755906	198639137,198639341,198692373,198703372,198704498,198706952,198708261,198709824,198713072,198716840,198718302,198722476,198728448,198729171,198731726,198732390,198732556,198734232,198734425,198735252,198742026,198742367,198744203,198748199,198749549,198750626,198752371,198752772,198754404,198757283	Gene ID= ENSG00000081237.18 TPM= 8.76 Transcript Type= protein_coding
chr1	198639097	198695171	198639097	198695171	+	ENST00000413409.6@PTPRC	ENST00000413409.6	protein_coding	198639097,198639226,198692347,198694018	198639137,198639341,198692373,198695171	Gene ID= ENSG00000081237.18 TPM= 1.17 Transcript Type= protein_coding
chr1	200039267	200177420	200039267	200177420	+	transcript11787.chr1.nic@NR5A2	transcript11787.chr1.nic	protein_coding	200039267,200043774,200045443,200048172,200111202,200120808,200173963	200039795,200043892,200045584,200048818,200111321,200120955,200177420	Gene ID= ENSG00000116833.13 TPM= 8.56 Transcript Type= NA
chr1	200042583	200177420	200042583	200177420	+	transcript11788.chr1.nnic@NR5A2	transcript11788.chr1.nnic	protein_coding	200042583,200043774,200045443,200048172,200111202,200120808,200173963	200042998,200043892,200045584,200048818,200111321,200120955,200177420	Gene ID= ENSG00000116833.13 TPM= 9.73 Transcript Type= NA
chr1	200042825	200177420	200042825	200177420	+	ENST00000544748.5@NR5A2	ENST00000544748.5	protein_coding	200042825,200043774,200045443,200048172,200111202,200120808,200173963	200042965,200043892,200045584,200048818,200111321,200120955,200177420	Gene ID= ENSG00000116833.13 TPM= 1.55 Transcript Type= protein_coding
chr1	200404940	200410056	200404940	200410056	-	ENST00000294740.3@ZNF281	ENST00000294740.3	protein_coding	200409946,200404940	200410056,200409719	Gene ID= ENSG00000162702.7 TPM= 2.34 Transcript Type= protein_coding
chr1	200406708	200410009	200406708	200410009	-	ENST00000367353.1@ZNF281	ENST00000367353.1	protein_coding	200409946,200406708	200410009,200409723	Gene ID= ENSG00000162702.7 TPM= 40.87 Transcript Type= protein_coding
chr1	200644039	200669918	200644039	200669918	-	transcript11810.chr1.nic@DDX59	transcript11810.chr1.nic	protein_coding	200669567,200665937,200663919,200659027,200650425,200649074,200648439,200644039	200669918,200666751,200664086,200659116,200650676,200649226,200648567,200644517	Gene ID= ENSG00000118197.13 TPM= 2.92 Transcript Type= NA
chr1	200644039	200669969	200644039	200669969	-	ENST00000331314.10@DDX59	ENST00000331314.10	protein_coding	200669767,200665937,200663919,200659027,200650425,200649074,200648439,200644039	200669969,200666751,200664086,200659116,200650676,200649226,200648567,200644517	Gene ID= ENSG00000118197.13 TPM= 16.93 Transcript Type= protein_coding
chr1	200738941	200849226	200738941	200849226	+	transcript11827.chr1.nic@CAMSAP2	transcript11827.chr1.nic	protein_coding	200738941,200760839,200807376,200815561,200832200,200832706,200841994,200844782,200847210,200847640,200848032	200739966,200761098,200807537,200815644,200832341,200832845,200842087,200844869,200847292,200847709,200849226	Gene ID= ENSG00000118200.14 TPM= 2.34 Transcript Type= NA
chr1	200756425	200759054	200756425	200759054	-	transcript11829.chr1.nnic@NA	transcript11829.chr1.nnic	NA	200756425	200759054	Gene ID= novel_gene_chr1_11830 TPM= 2.34 Transcript Type= NA
chr1	201134773	201154501	201134773	201154501	-	ENST00000367332.5@TMEM9	ENST00000367332.5	protein_coding	201154445,201153849,201151761,201146740,201143820,201134773	201154501,201153959,201151852,201146848,201143951,201135815	Gene ID= ENSG00000116857.16 TPM= 8.76 Transcript Type= protein_coding
chr1	201134772	201171574	201134772	201171574	-	ENST00000367333.6@TMEM9	ENST00000367333.6	protein_coding	201171490,201153858,201151761,201146740,201143820,201134772	201171574,201153959,201151852,201146848,201143951,201135815	Gene ID= ENSG00000116857.16 TPM= 16.93 Transcript Type= protein_coding
chr1	201283452	201332993	201283452	201332993	+	ENST00000367324.7@PKP1	ENST00000367324.7	protein_coding	201283452,201293942,201313166,201316553,201317572,201318618,201320267,201321978,201323013,201324428,201324941,201325754,201328762,201330074	201283904,201294045,201313560,201316697,201317779,201318795,201320381,201322133,201323189,201324581,201325127,201325838,201328868,201332993	Gene ID= ENSG00000081277.12 TPM= 2.34 Transcript Type= protein_coding
chr1	201359015	201368229	201359015	201368229	-	transcript11844.chr1.nic@TNNT2	transcript11844.chr1.nic	protein_coding	201368162,201367771,201366838,201365610,201365191,201364298,201363296,201361913,201361279,201359623,201359015	201368229,201367806,201366871,201365670,201365307,201364375,201363406,201362022,201361369,201359663,201359255	Gene ID= ENSG00000118194.18 TPM= 2.34 Transcript Type= NA
chr1	201380838	201399608	201380838	201399608	-	ENST00000391967.6@LAD1	ENST00000391967.6	protein_coding	201399269,201389160,201386335,201385701,201384792,201383317,201383074,201382653,201382252,201380838	201399608,201389303,201387178,201385805,201384835,201383389,201383211,201382739,201382326,201381893	Gene ID= ENSG00000159166.13 TPM= 3.5 Transcript Type= protein_coding
chr1	201464383	201469184	201464383	201469184	-	ENST00000367311.4@PHLDA3	ENST00000367311.4	protein_coding	201468341,201464383	201469184,201466178	Gene ID= ENSG00000174307.6 TPM= 2.34 Transcript Type= protein_coding
chr1	201483530	201509456	201483530	201509456	-	ENST00000367306.5@CSRP1	ENST00000367306.5	protein_coding	201509437,201507070,201496192,201490176,201488855,201485283,201483530	201509456,201507412,201496304,201490344,201488984,201485376,201484789	Gene ID= ENSG00000159176.13 TPM= 422.09 Transcript Type= protein_coding
chr1	201483530	201507119	201483530	201507119	-	transcript11860.chr1.nic@CSRP1	transcript11860.chr1.nic	protein_coding	201507070,201496192,201490176,201485283,201483530	201507119,201496304,201490344,201488984,201484789	Gene ID= ENSG00000159176.13 TPM= 15.76 Transcript Type= NA
chr1	201829141	201884294	201829141	201884294	+	ENST00000361565.8@IPO9	ENST00000361565.8	protein_coding	201829141,201847279,201847552,201848393,201852104,201853011,201854595,201854823,201855124,201855783,201857096,201858447,201858855,201863448,201866733,201868648,201869590,201870583,201871161,201872828,201874250,201874832,201875152,201875944	201829372,201847340,201847638,201848594,201852192,201853097,201854714,201854923,201855182,201855934,201857194,201858553,201858994,201863607,201866959,201868796,201869718,201870858,201871327,201872961,201874372,201874936,201875228,201884294	Gene ID= ENSG00000198700.9 TPM= 7.01 Transcript Type= protein_coding
chr1	201829151	201862823	201829151	201862823	+	transcript11872.chr1.nic@IPO9	transcript11872.chr1.nic	protein_coding	201829151,201834954,201847279,201847552,201848393,201852104,201853011,201854595,201854823,201855124,201855783,201857096,201858447,201858855	201829372,201835064,201847340,201847638,201848594,201852192,201853097,201854714,201854923,201855182,201855934,201857194,201858553,201862823	Gene ID= ENSG00000198700.9 TPM= 2.92 Transcript Type= NA
chr1	201856130	201862823	201856130	201862823	+	transcript11876.chr1.nic@IPO9	transcript11876.chr1.nic	protein_coding	201856130,201858447,201858855	201857194,201858553,201862823	Gene ID= ENSG00000198700.9 TPM= 2.92 Transcript Type= NA
chr1	201888708	201892306	201888708	201892306	+	ENST00000362011.6@SHISA4	ENST00000362011.6	protein_coding	201888708,201889445,201890454,201891401,201891800	201889067,201889616,201890587,201891568,201892306	Gene ID= ENSG00000198892.6 TPM= 28.02 Transcript Type= protein_coding
chr1	201896452	201946587	201896452	201946587	-	ENST00000367288.4@LMOD1	ENST00000367288.4	protein_coding	201946080,201899237,201896452	201946587,201900751,201898398	Gene ID= ENSG00000163431.12 TPM= 96.91 Transcript Type= protein_coding
chr1	201955491	201970661	201955491	201970661	+	ENST00000367287.4@TIMM17A	ENST00000367287.4	protein_coding	201955491,201957281,201957511,201963616,201965433,201969469	201955552,201957380,201957574,201963744,201965543,201970661	Gene ID= ENSG00000134375.10 TPM= 5.84 Transcript Type= protein_coding
chr1	201982624	202006147	201982624	202006147	+	ENST00000295640.8@RNPEP	ENST00000295640.8	protein_coding	201982624,201988904,201989383,201996147,201997319,201999902,202001376,202001659,202003237,202004354,202005558	201983113,201989044,201989531,201996263,201997554,202000015,202001488,202001767,202003461,202004496,202006147	Gene ID= ENSG00000176393.10 TPM= 177.3 Transcript Type= protein_coding
chr1	202010517	202017188	202010517	202017188	+	ENST00000367284.9@ELF3	ENST00000367284.9	protein_coding	202010517,202011129,202011957,202012344,202012640,202012947,202013182,202013829,202015209	202010706,202011299,202012178,202012436,202012759,202013036,202013298,202014024,202017188	Gene ID= ENSG00000163435.15 TPM= 2.34 Transcript Type= protein_coding
chr1	202010582	202016009	202010582	202016009	+	transcript11912.chr1.nic@ELF3	transcript11912.chr1.nic	protein_coding	202010582,202011129,202011957,202012344,202012640,202013182,202013829,202015209	202010706,202011299,202012178,202012436,202013036,202013298,202014024,202016009	Gene ID= ENSG00000163435.15 TPM= 2.92 Transcript Type= NA
chr1	202010581	202016009	202010581	202016009	+	transcript11914.chr1.nic@ELF3	transcript11914.chr1.nic	protein_coding	202010581,202011957,202012947,202013182,202013829,202015209	202010706,202012759,202013036,202013298,202014024,202016009	Gene ID= ENSG00000163435.15 TPM= 4.09 Transcript Type= NA
chr1	202133404	202144741	202133404	202144741	-	ENST00000272217.6@ARL8A	ENST00000272217.6	protein_coding	202144450,202138368,202137965,202135707,202135459,202135150,202133404	202144741,202138448,202138038,202135800,202135526,202135220,202134516	Gene ID= ENSG00000143862.7 TPM= 161.13 Transcript Type= protein_coding
chr1	202147013	202161581	202147013	202161581	-	ENST00000309017.7@PTPN7	ENST00000309017.7	protein_coding	202160545,202159281,202158118,202157739,202155533,202154186,202153725,202152542,202150311,202147013	202161581,202159454,202158301,202157823,202155609,202154323,202153835,202152699,202150424,202148699	Gene ID= ENSG00000143851.15 TPM= 7.01 Transcript Type= protein_coding
chr1	202331657	202341980	202331657	202341980	-	ENST00000367274.8@UBE2T	ENST00000367274.8	protein_coding	202341895,202335646,202334989,202333450,202333237,202333010,202331657	202341980,202335818,202335058,202333555,202333335,202333093,202331960	Gene ID= ENSG00000077152.9 TPM= 5.84 Transcript Type= protein_coding
chr1	202348720	202438242	202348720	202438242	+	ENST00000480184.5@PPP1R12B	ENST00000480184.5	protein_coding	202348720,202416787,202422620,202425566,202427040,202428855,202430731,202431480,202434656,202437821	202349142,202416917,202422738,202425725,202427184,202428929,202430810,202431619,202434768,202438242	Gene ID= ENSG00000077157.21 TPM= 1.17 Transcript Type= protein_coding
chr1	202728199	202808297	202728199	202808297	-	transcript11935.chr1.nnic@KDM5B	transcript11935.chr1.nnic	protein_coding	202808102,202777017,202774613,202773118,202766926,202764049,202762699,202760415,202758391,202756358,202755271,202752905,202750659,202748945,202746142,202745858,202742655,202742391,202741367,202740674,202736213,202735429,202733401,202731828,202730909,202729707,202728199	202808297,202777094,202774699,202773288,202767060,202764145,202762808,202760573,202758510,202756516,202755452,202753067,202750778,202749139,202746323,202745982,202742805,202742505,202741722,202740812,202736392,202735587,202733886,202731939,202731063,202730027,202729173	Gene ID= ENSG00000117139.16 TPM= 3.5 Transcript Type= NA
chr1	202724491	202809470	202724491	202809470	-	ENST00000367265.7@KDM5B	ENST00000367265.7	protein_coding	202808102,202777017,202774613,202773118,202766926,202764049,202762699,202760415,202758391,202756358,202755271,202752905,202750659,202748945,202746142,202745858,202742655,202742391,202741367,202740674,202736213,202735429,202733401,202731828,202730909,202729707,202724491	202809470,202777094,202774735,202773288,202767060,202764145,202762808,202760573,202758510,202756516,202755452,202753067,202750778,202749139,202746323,202745982,202742805,202742505,202741722,202740812,202736392,202735587,202733886,202731939,202731063,202730027,202729173	Gene ID= ENSG00000117139.16 TPM= 6.42 Transcript Type= protein_coding
chr1	202727443	202808418	202727443	202808418	-	ENST00000367264.6@KDM5B	ENST00000367264.6	protein_coding	202808102,202777017,202774613,202773118,202766926,202766397,202764049,202762699,202760415,202758391,202756358,202755271,202752905,202750659,202748945,202746142,202745858,202742655,202742391,202741367,202740674,202736213,202735429,202733401,202731828,202730909,202729707,202727443	202808418,202777094,202774735,202773288,202767060,202766504,202764145,202762808,202760573,202758510,202756516,202755452,202753067,202750778,202749139,202746323,202745982,202742805,202742505,202741722,202740812,202736392,202735587,202733886,202731939,202731063,202730027,202729173	Gene ID= ENSG00000117139.16 TPM= 1.75 Transcript Type= protein_coding
chr1	202876557	202879820	202876557	202879820	-	transcript11947.chr1.nnic@NA	transcript11947.chr1.nnic	NA	202876557	202879820	Gene ID= novel_gene_chr1_11948 TPM= 2.34 Transcript Type= NA
chr1	202878957	202889135	202878957	202889135	-	ENST00000367262.3@RABIF	ENST00000367262.3	protein_coding	202888973,202878957	202889135,202881223	Gene ID= ENSG00000183155.4 TPM= 7.01 Transcript Type= protein_coding
chr1	202891100	202927272	202891100	202927272	-	transcript11952.chr1.nnic@KLHL12	transcript11952.chr1.nnic	protein_coding	202927089,202924968,202919755,202918171,202911054,202909010,202895522,202894591,202894184,202893239,202891100	202927272,202925207,202919908,202918388,202911203,202909124,202895717,202894749,202894282,202893425,202892659	Gene ID= ENSG00000117153.15 TPM= 3.5 Transcript Type= NA
chr1	202891100	202927262	202891100	202927262	-	ENST00000367261.7@KLHL12	ENST00000367261.7	protein_coding	202927089,202924968,202919755,202918171,202911054,202909010,202896854,202895522,202894591,202894184,202893239,202891100	202927262,202925207,202919908,202918388,202911203,202909124,202896960,202895717,202894749,202894282,202893425,202892659	Gene ID= ENSG00000117153.15 TPM= 42.03 Transcript Type= protein_coding
chr1	202940823	202958389	202940823	202958389	-	ENST00000340990.9@ADIPOR1	ENST00000340990.9	protein_coding	202958185,202950930,202948304,202946439,202944983,202943758,202942025,202940823	202958389,202951164,202948420,202946610,202945169,202943945,202942218,202941701	Gene ID= ENSG00000159346.12 TPM= 549.06 Transcript Type= protein_coding
chr1	202961869	202967280	202961869	202967280	-	ENST00000367249.8@CYB5R1	ENST00000367249.8	protein_coding	202967191,202966749,202966528,202965887,202965371,202964612,202963642,202963066,202961869	202967280,202966898,202966600,202965993,202965500,202964695,202963727,202963165,202962699	Gene ID= ENSG00000159348.12 TPM= 110.92 Transcript Type= protein_coding
chr1	203006709	203024848	203006709	203024848	+	transcript11992.chr1.nic@TMEM183A	transcript11992.chr1.nic	protein_coding	203006709,203007774,203008643,203014889,203018481,203020793,203022855	203007574,203007863,203008810,203016140,203018561,203020948,203024848	Gene ID= ENSG00000163444.11 TPM= 3.5 Transcript Type= NA
chr1	203007386	203024848	203007386	203024848	+	ENST00000367242.3@TMEM183A	ENST00000367242.3	protein_coding	203007386,203007774,203008643,203014889,203015960,203018481,203020793,203022855	203007574,203007863,203008810,203015048,203016140,203018561,203020948,203024848	Gene ID= ENSG00000163444.11 TPM= 43.2 Transcript Type= protein_coding
chr1	203127708	203167405	203127708	203167405	+	ENST00000337894.8@ADORA1	ENST00000337894.8	protein_coding	203127708,203128278,203128785,203165261	203127928,203128432,203129182,203167405	Gene ID= ENSG00000163485.16 TPM= 5.84 Transcript Type= protein_coding
chr1	203178931	203186704	203178931	203186704	-	transcript12002.chr1.nnic@CHI3L1	transcript12002.chr1.nnic	protein_coding	203186599,203186316,203185184,203184576,203183641,203182731,203182177,203179761,203179265,203178931	203186704,203186345,203185385,203184632,203183791,203182852,203182304,203181285,203179585,203179176	Gene ID= ENSG00000133048.12 TPM= 5.84 Transcript Type= NA
chr1	203178931	203186760	203178931	203186760	-	transcript12007.chr1.nic@CHI3L1	transcript12007.chr1.nic	protein_coding	203186599,203186316,203185184,203184576,203183641,203182731,203181162,203179761,203178931	203186760,203186345,203185385,203184632,203183791,203182852,203181285,203179877,203179585	Gene ID= ENSG00000133048.12 TPM= 9.73 Transcript Type= NA
chr1	203178931	203186760	203178931	203186760	-	transcript12009.chr1.nic@CHI3L1	transcript12009.chr1.nic	protein_coding	203186599,203186316,203185184,203184576,203183641,203182731,203181162,203179761,203178931	203186760,203186345,203185385,203184632,203183791,203182852,203181285,203180652,203179585	Gene ID= ENSG00000133048.12 TPM= 13.23 Transcript Type= NA
chr1	203178931	203186760	203178931	203186760	-	transcript12012.chr1.nnic@CHI3L1	transcript12012.chr1.nnic	protein_coding	203186599,203186316,203185184,203184576,203183641,203182731,203182177,203179761,203178931	203186760,203186345,203185385,203184632,203183791,203182852,203182304,203181285,203179585	Gene ID= ENSG00000133048.12 TPM= 7.88 Transcript Type= NA
chr1	203178931	203186760	203178931	203186760	-	transcript12018.chr1.nic@CHI3L1	transcript12018.chr1.nic	protein_coding	203186599,203186316,203185184,203184576,203183641,203182731,203179761,203178931	203186760,203186345,203185385,203184632,203183791,203182852,203181285,203179585	Gene ID= ENSG00000133048.12 TPM= 23.06 Transcript Type= NA
chr1	203178936	203186760	203178936	203186760	-	transcript12025.chr1.nic@CHI3L1	transcript12025.chr1.nic	protein_coding	203186599,203186316,203185184,203184576,203183641,203182731,203178936	203186760,203186345,203185385,203184632,203183791,203182852,203181285	Gene ID= ENSG00000133048.12 TPM= 5.84 Transcript Type= NA
chr1	203178931	203186749	203178931	203186749	-	ENST00000255409.7@CHI3L1	ENST00000255409.7	protein_coding	203186599,203186316,203185184,203184576,203183641,203182731,203181162,203180470,203179761,203178931	203186749,203186345,203185385,203184632,203183791,203182852,203181285,203180652,203179877,203179585	Gene ID= ENSG00000133048.12 TPM= 128.82 Transcript Type= protein_coding
chr1	203212827	203229717	203212827	203229717	-	transcript12057.chr1.nic@CHIT1	transcript12057.chr1.nic	protein_coding	203229612,203228533,203225669,203225048,203223495,203223135,203222202,203219664,203219216,203217739,203212827	203229717,203228562,203225870,203225104,203223660,203223259,203222325,203219849,203219329,203217865,203213045	Gene ID= ENSG00000133063.15 TPM= 82.02 Transcript Type= NA
chr1	203216079	203229671	203216079	203229671	-	ENST00000367229.5@CHIT1	ENST00000367229.5	protein_coding	203229612,203228533,203225669,203225048,203223495,203223135,203222202,203219664,203219216,203217739,203216079	203229671,203228562,203225870,203225104,203223660,203223259,203222325,203219849,203219329,203217865,203217133	Gene ID= ENSG00000133063.15 TPM= 65.39 Transcript Type= protein_coding
chr1	203216670	203229671	203216670	203229671	-	ENST00000255427.7@CHIT1	ENST00000255427.7	protein_coding	203229612,203228533,203225669,203223495,203223135,203222202,203219664,203219216,203217739,203216670	203229671,203228562,203225870,203223660,203223259,203222325,203219849,203219329,203217865,203217133	Gene ID= ENSG00000133063.15 TPM= 240.52 Transcript Type= protein_coding
chr1	203216670	203229645	203216670	203229645	-	ENST00000491855.5@CHIT1	ENST00000491855.5	protein_coding	203229612,203228533,203225669,203225048,203223495,203223135,203222202,203219664,203219216,203217739,203217302,203216670	203229645,203228562,203225870,203225104,203223660,203223259,203222325,203219849,203219329,203217865,203217372,203217133	Gene ID= ENSG00000133063.15 TPM= 12.84 Transcript Type= nonsense_mediated_decay
chr1	203305536	203309602	203305536	203309602	+	ENST00000290551.4@BTG2	ENST00000290551.4	protein_coding	203305536,203307104	203305748,203309602	Gene ID= ENSG00000159388.5 TPM= 114.42 Transcript Type= protein_coding
chr1	203340624	203351127	203340624	203351127	-	transcript12165.chr1.nic@FMOD	transcript12165.chr1.nic	protein_coding	203351033,203347292,203342327,203340624	203351127,203348277,203342494,203341829	Gene ID= ENSG00000122176.10 TPM= 3.5 Transcript Type= NA
chr1	203340628	203351489	203340628	203351489	-	ENST00000354955.4@FMOD	ENST00000354955.4	protein_coding	203351033,203347292,203340628	203351489,203348277,203342494	Gene ID= ENSG00000122176.10 TPM= 133.11 Transcript Type= protein_coding
chr1	203475792	203487161	203475792	203487161	+	transcript12172.chr1.nnic@PRELP	transcript12172.chr1.nnic	protein_coding	203475792,203483169,203486706	203475928,203484157,203487161	Gene ID= ENSG00000188783.5 TPM= 7.01 Transcript Type= NA
chr1	203475828	203491352	203475828	203491352	+	ENST00000343110.2@PRELP	ENST00000343110.2	protein_coding	203475828,203483169,203486706	203475938,203484157,203491352	Gene ID= ENSG00000188783.5 TPM= 77.06 Transcript Type= protein_coding
chr1	203626561	203744081	203626561	203744081	+	ENST00000357681.9@ATP2B4	ENST00000357681.9	protein_coding	203626561,203682742,203698157,203699460,203700206,203700798,203702044,203703652,203707009,203707862,203709301,203710877,203711960,203713165,203714171,203720549,203721197,203722478,203723881,203727395,203739546	203627219,203683398,203698354,203699717,203700331,203700923,203702079,203703813,203707223,203708104,203709542,203711108,203712139,203713252,203714277,203720740,203721410,203722689,203723988,203727571,203744081	Gene ID= ENSG00000058668.14 TPM= 120.26 Transcript Type= protein_coding
chr1	203795595	203854121	203795595	203854121	+	transcript12192.chr1.nnic@ZC3H11A	transcript12192.chr1.nnic	protein_coding	203795595,203801575,203802569,203816926,203818570,203828299,203829451,203829780,203830123,203831661,203833791,203837966,203840306,203847184,203848331,203849711,203850515,203851057,203852141	203795794,203801628,203803016,203817124,203818689,203828422,203829654,203829896,203830203,203831771,203833853,203838064,203840374,203847687,203848407,203850026,203850681,203851124,203854121	Gene ID= ENSG00000058673.16 TPM= 12.55 Transcript Type= NA
chr1	203795595	203854121	203795595	203854121	+	transcript12193.chr1.nic@ZC3H11A	transcript12193.chr1.nic	protein_coding	203795595,203801575,203802957,203816926,203818570,203828299,203829451,203829780,203830123,203831661,203833791,203837966,203840306,203847184,203848331,203849711,203850515,203851057,203852141	203795794,203801628,203803016,203817124,203818689,203828422,203829654,203829896,203830203,203831771,203833853,203838064,203840374,203847687,203848407,203850026,203850681,203851124,203854121	Gene ID= ENSG00000058673.16 TPM= 11.68 Transcript Type= NA
chr1	203795631	203854121	203795631	203854121	+	transcript12197.chr1.nic@ZC3H11A	transcript12197.chr1.nic	protein_coding	203795631,203796293,203801575,203816926,203818570,203828299,203829451,203829780,203830123,203831661,203833791,203837966,203840306,203847184,203848331,203849711,203850515,203851057,203852141	203795794,203796496,203803016,203817124,203818689,203828422,203829654,203829896,203830203,203831771,203833853,203838064,203840374,203847687,203848407,203850026,203850681,203851124,203854121	Gene ID= ENSG00000058673.16 TPM= 16.05 Transcript Type= NA
chr1	203795660	203854121	203795660	203854121	+	ENST00000367210.2@ZC3H11A	ENST00000367210.2	protein_coding	203795660,203801575,203816926,203818570,203828299,203829451,203829780,203830123,203831661,203833791,203837966,203840306,203847184,203848331,203849711,203850515,203851057,203852141	203795794,203803016,203817124,203818689,203828422,203829654,203829896,203830203,203831771,203833853,203838064,203840374,203847687,203848407,203850026,203850681,203851124,203854121	Gene ID= ENSG00000058673.16 TPM= 33.57 Transcript Type= protein_coding
chr1	203795644	203854121	203795644	203854121	+	transcript12201.chr1.nnic@ZBED6	transcript12201.chr1.nnic	protein_coding	203795644,203801575,203816926,203818570,203828299,203829451,203829780,203830123,203831661,203833791,203837966,203840306,203847184,203848331,203849711,203850515,203851057,203852141	203795775,203803016,203817124,203818689,203828422,203829654,203829896,203830203,203831771,203833853,203838064,203840374,203847687,203848407,203850026,203850681,203851124,203854121	Gene ID= ENSG00000257315.2 TPM= 12.55 Transcript Type= NA
chr1	203861603	203870084	203861603	203870084	+	ENST00000475035.5@SNRPE	ENST00000475035.5	protein_coding	203861603,203862182,203863663,203865041,203869877	203861743,203862222,203863725,203865119,203870084	Gene ID= ENSG00000182004.12 TPM= 1.17 Transcript Type= processed_transcript
chr1	203861603	203870081	203861603	203870081	+	ENST00000483099.5@SNRPE	ENST00000483099.5	protein_coding	203861603,203863663,203865041,203869877	203862222,203863725,203865119,203870081	Gene ID= ENSG00000182004.12 TPM= 2.34 Transcript Type= processed_transcript
chr1	204073604	204127743	204073604	204127743	+	ENST00000367204.5@SOX13	ENST00000367204.5	protein_coding	204073604,204112915,204114321,204114519,204116507,204117122,204117593,204121900,204122237,204122854,204123112,204123661,204124641,204125858	204073711,204113134,204114432,204114605,204116679,204117190,204117707,204121985,204122399,204122963,204123208,204123804,204124857,204127743	Gene ID= ENSG00000143842.14 TPM= 29.19 Transcript Type= protein_coding
chr1	204105415	204109011	204105415	204109011	-	transcript12218.chr1.nnic@NA	transcript12218.chr1.nnic	NA	204105415	204109011	Gene ID= novel_gene_chr1_12219 TPM= 4.67 Transcript Type= NA
chr1	204198160	204214092	204198160	204214092	-	ENST00000308302.3@GOLT1A	ENST00000308302.3	protein_coding	204213882,204202896,204201633,204199195,204198160	204214092,204202987,204201811,204199258,204198496	Gene ID= ENSG00000174567.7 TPM= 9.34 Transcript Type= protein_coding
chr1	204403387	204411791	204403387	204411791	-	ENST00000367188.4@PPP1R15B	ENST00000367188.4	protein_coding	204409492,204403387	204411791,204406313	Gene ID= ENSG00000158615.8 TPM= 60.71 Transcript Type= protein_coding
chr1	204528075	204534944	204528075	204534944	+	transcript12246.chr1.nic@MDM4	transcript12246.chr1.nic	protein_coding	204528075,204532191	204530817,204534944	Gene ID= ENSG00000198625.12 TPM= 4.67 Transcript Type= NA
chr1	204617170	204685733	204617170	204685733	-	ENST00000367177.3@LRRN2	ENST00000367177.3	protein_coding	204685320,204617170	204685733,204620218	Gene ID= ENSG00000170382.11 TPM= 19.85 Transcript Type= protein_coding
chr1	204828654	205022821	204828654	205022821	+	ENST00000360049.8@NFASC	ENST00000360049.8	protein_coding	204828654,204920632,204944226,204952011,204954188,204954829,204957656,204962108,204968249,204968798,204970616,204973276,204974179,204974657,204975271,204976671,204978968,204979362,204980370,204981798,204984027,204985910,204987418,204988633,205009557,205012797,205016308	204828782,204920740,204944406,204952116,204954384,204954951,204957826,204962158,204968360,204968982,204970747,204973419,204974290,204974823,204975418,204976795,204979069,204979559,204980440,204982020,204984142,204986114,204987540,204988806,205009688,205012866,205022821	Gene ID= ENSG00000163531.15 TPM= 23.35 Transcript Type= protein_coding
chr1	204987470	205000846	204987470	205000846	+	ENST00000492085.1@NFASC	ENST00000492085.1	protein_coding	204987470,204988633,204991292,204997170	204987540,204988806,204991306,205000846	Gene ID= ENSG00000163531.15 TPM= 1.17 Transcript Type= processed_transcript
chr1	205086142	205122015	205086142	205122015	-	ENST00000264515.10@RBBP5	ENST00000264515.10	protein_coding	205121855,205115858,205114789,205105028,205103857,205101600,205100152,205099911,205099741,205098989,205097326,205096682,205094873,205086142	205122015,205115883,205114961,205105168,205104019,205101709,205100271,205100064,205099812,205099106,205097395,205096911,205095064,205088815	Gene ID= ENSG00000117222.13 TPM= 12.84 Transcript Type= protein_coding
chr1	205086142	205122015	205086142	205122015	-	ENST00000367164.1@RBBP5	ENST00000367164.1	protein_coding	205121855,205115858,205114789,205105028,205103857,205101600,205100152,205099911,205099741,205098989,205097326,205096682,205094987,205086142	205122015,205115883,205114961,205105168,205104019,205101709,205100271,205100064,205099812,205099106,205097395,205096911,205095064,205088815	Gene ID= ENSG00000117222.13 TPM= 12.84 Transcript Type= protein_coding
chr1	205142505	205211566	205142505	205211566	-	ENST00000367162.7@DSTYK	ENST00000367162.7	protein_coding	205211271,205187418,205169163,205163723,205162923,205162036,205161258,205160114,205159547,205157273,205150680,205148205,205142505	205211566,205187806,205169832,205163955,205163006,205162212,205161387,205160270,205159679,205157386,205150794,205148339,205147745	Gene ID= ENSG00000133059.16 TPM= 7.01 Transcript Type= protein_coding
chr1	205227966	205273343	205227966	205273343	+	transcript12284.chr1.nnic@TMCC2	transcript12284.chr1.nnic	protein_coding	205227966,205228158,205241505,205268950,205271120,205271813	205227997,205228771,205242044,205269884,205271255,205273343	Gene ID= ENSG00000133069.15 TPM= 8.17 Transcript Type= NA
chr1	205302059	205321791	205302059	205321791	-	ENST00000367157.4@NUAK2	ENST00000367157.4	protein_coding	205321398,205311705,205308581,205308165,205306188,205305199,205302059	205321791,205311825,205308732,205308230,205306307,205305331,205304513	Gene ID= ENSG00000163545.8 TPM= 28.02 Transcript Type= protein_coding
chr1	205336092	205357038	205336092	205357038	-	ENST00000367156.7@KLHDC8A	ENST00000367156.7	protein_coding	205356988,205356533,205348376,205344134,205343229,205339644,205339194,205338495,205336092	205357038,205356569,205348590,205344458,205343793,205339808,205339409,205338596,205337592	Gene ID= ENSG00000162873.14 TPM= 1.17 Transcript Type= protein_coding
chr1	205504599	205532793	205504599	205532793	+	ENST00000360066.6@CDK18	ENST00000360066.6	protein_coding	205504599,205523147,205523483,205524232,205525139,205526065,205526367,205526775,205527794,205528048,205528999,205529324,205529521,205530259,205530628,205531344	205504878,205523297,205523625,205524357,205525195,205526179,205526461,205526837,205527917,205528168,205529096,205529429,205529563,205530349,205530705,205532793	Gene ID= ENSG00000117266.15 TPM= 25.69 Transcript Type= protein_coding
chr1	205568977	205602918	205568977	205602918	+	ENST00000367147.8@MFSD4A	ENST00000367147.8	protein_coding	205568977,205579751,205580661,205583955,205584876,205586034,205592140,205597780,205599131,205600406	205569299,205579949,205580921,205584123,205584991,205586207,205592287,205597850,205599251,205602918	Gene ID= ENSG00000174514.12 TPM= 36.2 Transcript Type= protein_coding
chr1	205568975	205602918	205568975	205602918	+	transcript12306.chr1.nic@MFSD4A	transcript12306.chr1.nic	protein_coding	205568975,205579751,205583955,205584876,205586034,205592140,205597780,205599131,205600406	205569299,205579949,205584123,205584991,205586207,205592287,205597850,205599251,205602918	Gene ID= ENSG00000174514.12 TPM= 8.17 Transcript Type= NA
chr1	205657851	205680459	205657851	205680459	-	ENST00000367145.3@SLC45A3	ENST00000367145.3	protein_coding	205680394,205664485,205662833,205661861,205657851	205680459,205664886,205663618,205662126,205659671	Gene ID= ENSG00000158715.5 TPM= 3.5 Transcript Type= protein_coding
chr1	205712819	205750276	205712819	205750276	-	ENST00000367142.4@NUCKS1	ENST00000367142.4	protein_coding	205749957,205729572,205727700,205723926,205720501,205719527,205712819	205750276,205729621,205727805,205723981,205720653,205719676,205718479	Gene ID= ENSG00000069275.12 TPM= 49.04 Transcript Type= protein_coding
chr1	205767986	205775446	205767986	205775446	-	ENST00000367139.7@RAB29	ENST00000367139.7	protein_coding	205775273,205774833,205772496,205771472,205770733,205767986	205775446,205775086,205772567,205771653,205770854,205770453	Gene ID= ENSG00000117280.12 TPM= 2.34 Transcript Type= protein_coding
chr1	205769437	205775451	205769437	205775451	-	transcript12341.chr1.nnic@RAB29	transcript12341.chr1.nnic	protein_coding	205775273,205774833,205772496,205771472,205770733,205769437	205775451,205775091,205772567,205771653,205770854,205770453	Gene ID= ENSG00000117280.12 TPM= 3.5 Transcript Type= NA
chr1	205769437	205775462	205769437	205775462	-	transcript12342.chr1.nnic@RAB29	transcript12342.chr1.nnic	protein_coding	205775374,205774833,205772496,205771472,205770733,205769437	205775462,205775091,205772567,205771653,205770854,205770453	Gene ID= ENSG00000117280.12 TPM= 2.34 Transcript Type= NA
chr1	205769437	205775464	205769437	205775464	-	transcript12348.chr1.nnic@RAB29	transcript12348.chr1.nnic	protein_coding	205775374,205772496,205771472,205770733,205769437	205775464,205772567,205771653,205770854,205770453	Gene ID= ENSG00000117280.12 TPM= 2.34 Transcript Type= NA
chr1	205769437	205775449	205769437	205775449	-	ENST00000235932.8@RAB29	ENST00000235932.8	protein_coding	205775374,205774833,205772496,205771472,205770733,205769437	205775449,205775086,205772567,205771653,205770854,205770453	Gene ID= ENSG00000117280.12 TPM= 10.51 Transcript Type= protein_coding
chr1	205789093	205813176	205789093	205813176	-	ENST00000367137.3@SLC41A1	ENST00000367137.3	protein_coding	205812808,205810070,205800953,205799759,205798957,205798669,205797904,205796924,205795344,205794870,205789093	205813176,205811087,205801060,205799830,205799101,205798815,205798051,205797003,205795478,205795018,205791718	Gene ID= ENSG00000133065.10 TPM= 42.03 Transcript Type= protein_coding
chr1	205828022	205850117	205828022	205850117	-	ENST00000367136.4@PM20D1	ENST00000367136.4	protein_coding	205849904,205847885,205845325,205844811,205844087,205843667,205842676,205842154,205841811,205840252,205832598,205830280,205828022	205850117,205847971,205845557,205844897,205844217,205843786,205842751,205842215,205841889,205840323,205832766,205830379,205828743	Gene ID= ENSG00000162877.12 TPM= 2.34 Transcript Type= protein_coding
chr1	205913048	205943460	205913048	205943460	-	ENST00000367135.7@SLC26A9	ENST00000367135.7	protein_coding	205943365,205935696,205932945,205932702,205931860,205929892,205929204,205928827,205927902,205927492,205927211,205926535,205924383,205923544,205923335,205923082,205921566,205920176,205918840,205917283,205913048	205943460,205935838,205933084,205932812,205932035,205930056,205929356,205928909,205928049,205927605,205927288,205926630,205924489,205923613,205923427,205923195,205921847,205920230,205918985,205917354,205915404	Gene ID= ENSG00000174502.18 TPM= 17.51 Transcript Type= protein_coding
chr1	205976740	206003413	205976740	206003413	-	ENST00000617070.4@RAB7B	ENST00000617070.4	protein_coding	206003253,205994083,205993420,205992480,205985540,205976740	206003413,205994151,205993546,205992695,205985665,205978928	Gene ID= ENSG00000276600.4 TPM= 25.69 Transcript Type= protein_coding
chr1	206009264	206023909	206009264	206023909	-	ENST00000358184.6@CTSE	ENST00000358184.6	protein_coding	206023724,206022901,206022150,206021049,206015931,206013772,206012508,206012308,206009264	206023909,206023057,206022267,206021167,206016130,206013894,206012649,206012406,206010347	Gene ID= ENSG00000196188.10 TPM= 32.69 Transcript Type= protein_coding
chr1	206018778	206023410	206018778	206023410	-	transcript12386.chr1.nnic@NA	transcript12386.chr1.nnic	NA	206018778	206023410	Gene ID= novel_gene_chr1_12387 TPM= 3.5 Transcript Type= NA
chr1	206203494	206456161	206203494	206456161	+	transcript12391.chr1.nic@SRGAP2	transcript12391.chr1.nic	protein_coding	206203494,206205429,206303281,206342846,206384014,206392689,206393545,206401421,206405249,206406377,206415889,206419373,206421250,206430162,206436965,206437964,206439976,206446075,206450386,206453200,206454144	206203650,206206037,206303473,206343008,206384076,206392904,206393673,206401645,206405350,206406574,206415973,206419400,206421274,206430222,206437042,206438098,206440081,206446299,206450465,206453380,206456161	Gene ID= ENSG00000266028.7 TPM= 11.09 Transcript Type= NA
chr1	206470495	206496889	206470495	206496889	+	ENST00000581977.6@IKBKE	ENST00000581977.6	protein_coding	206470495,206471156,206473196,206474331,206474865,206476181,206476678,206477749,206478160,206478943,206479870,206480022,206480447,206484997,206485194,206487914,206490819,206491648,206493023,206493266,206493920,206496112	206470698,206471245,206473314,206474471,206474994,206476362,206476838,206477859,206478339,206479133,206479934,206480113,206480533,206485072,206485306,206487990,206490858,206491749,206493119,206493378,206493991,206496889	Gene ID= ENSG00000263528.7 TPM= 17.51 Transcript Type= protein_coding
chr1	206498110	206502889	206498110	206502889	-	transcript12406.chr1.nnic@NA	transcript12406.chr1.nnic	NA	206498110	206502889	Gene ID= novel_gene_chr1_12407 TPM= 2.34 Transcript Type= NA
chr1	206557164	206589272	206557164	206589272	+	transcript12417.chr1.nic@RASSF5	transcript12417.chr1.nic	protein_coding	206557164,206583269,206584387,206586826	206557693,206583379,206584684,206589272	Gene ID= ENSG00000266094.7 TPM= 8.17 Transcript Type= NA
chr1	206557165	206589267	206557165	206589267	+	ENST00000577571.5@RASSF5	ENST00000577571.5	protein_coding	206557165,206583269,206584387,206585180,206586826	206557693,206583379,206584684,206585295,206589267	Gene ID= ENSG00000266094.7 TPM= 89.9 Transcript Type= protein_coding
chr1	206591642	206612467	206591642	206612467	-	transcript12421.chr1.nnic@EIF2D	transcript12421.chr1.nnic	protein_coding	206612287,206611184,206609376,206608927,206608236,206605400,206602951,206602336,206600263,206599733,206599463,206599003,206597100,206595718,206593619,206591642	206612467,206611374,206609459,206609048,206608326,206605507,206603204,206602453,206600308,206599836,206599612,206599092,206597195,206595838,206593793,206591845	Gene ID= ENSG00000143486.15 TPM= 5.25 Transcript Type= NA
chr1	206594040	206612456	206594040	206612456	-	transcript12427.chr1.nic@EIF2D	transcript12427.chr1.nic	protein_coding	206612287,206611184,206609376,206608236,206605400,206604609,206602951,206602336,206600263,206599733,206599463,206599003,206597100,206594040	206612456,206611374,206609459,206608326,206605507,206604729,206603204,206602453,206600308,206599836,206599612,206599092,206597195,206595838	Gene ID= ENSG00000143486.15 TPM= 2.92 Transcript Type= NA
chr1	206594040	206612455	206594040	206612455	-	transcript12428.chr1.nic@EIF2D	transcript12428.chr1.nic	protein_coding	206612287,206611184,206609376,206608236,206605400,206602951,206602336,206600263,206599733,206599463,206599003,206597100,206594040	206612455,206611374,206609459,206608326,206605507,206603204,206602453,206600308,206599836,206599612,206599092,206597195,206595838	Gene ID= ENSG00000143486.15 TPM= 2.92 Transcript Type= NA
chr1	206591642	206612459	206591642	206612459	-	ENST00000271764.6@EIF2D	ENST00000271764.6	protein_coding	206612287,206611184,206609376,206608236,206605400,206602951,206602336,206600263,206599733,206599463,206599003,206597100,206595718,206593619,206591642	206612459,206611374,206609459,206608326,206605507,206603204,206602453,206600308,206599836,206599612,206599092,206597195,206595838,206593793,206591845	Gene ID= ENSG00000143486.15 TPM= 63.63 Transcript Type= protein_coding
chr1	206591643	206595564	206591643	206595564	-	transcript12429.chr1.nnic@NA	transcript12429.chr1.nnic	NA	206591643	206595564	Gene ID= novel_gene_chr1_12430 TPM= 2.34 Transcript Type= NA
chr1	206635536	206649193	206635536	206649193	+	ENST00000367109.6@DYRK3	ENST00000367109.6	protein_coding	206635536,206637650,206647388	206635780,206637761,206649193	Gene ID= ENSG00000143479.15 TPM= 2.34 Transcript Type= protein_coding
chr1	206904386	206921998	206904386	206921998	-	ENST00000367091.7@FCMR	ENST00000367091.7	protein_coding	206921818,206913759,206912929,206911730,206910210,206909725,206909462,206904386	206921998,206914094,206913042,206911952,206910340,206909868,206909520,206905147	Gene ID= ENSG00000162894.11 TPM= 3.5 Transcript Type= protein_coding
chr1	206904268	206909947	206904268	206909947	-	transcript12443.chr1.nnic@FCMR	transcript12443.chr1.nnic	protein_coding	206909725,206904268	206909947,206905147	Gene ID= ENSG00000162894.11 TPM= 3.5 Transcript Type= NA
chr1	206928518	206946466	206928518	206946466	-	ENST00000356495.4@PIGR	ENST00000356495.4	protein_coding	206946336,206940489,206939119,206937095,206935486,206934420,206932986,206932456,206931671,206931497,206928518	206946466,206940584,206939463,206937751,206935818,206934746,206933166,206932577,206931802,206931555,206930413	Gene ID= ENSG00000162896.5 TPM= 2040.95 Transcript Type= protein_coding
chr1	207020695	207032764	207020695	207032764	-	transcript12479.chr1.nnic@C1orf116	transcript12479.chr1.nnic	protein_coding	207032707,207027494,207024887,207020695	207032764,207027679,207025064,207023480	Gene ID= ENSG00000182795.12 TPM= 4.67 Transcript Type= NA
chr1	207020695	207032760	207020695	207032760	-	transcript12486.chr1.nnic@C1orf116	transcript12486.chr1.nnic	protein_coding	207032707,207024887,207020695	207032760,207025064,207023480	Gene ID= ENSG00000182795.12 TPM= 2.34 Transcript Type= NA
chr1	207021668	207032662	207021668	207032662	-	transcript12490.chr1.nnic@C1orf116	transcript12490.chr1.nnic	protein_coding	207032579,207027494,207021668	207032662,207027679,207023480	Gene ID= ENSG00000182795.12 TPM= 2.34 Transcript Type= NA
chr1	207020695	207032767	207020695	207032767	-	transcript12493.chr1.nnic@C1orf116	transcript12493.chr1.nnic	protein_coding	207032579,207020695	207032767,207023480	Gene ID= ENSG00000182795.12 TPM= 7.01 Transcript Type= NA
chr1	207018521	207032747	207018521	207032747	-	ENST00000359470.5@C1orf116	ENST00000359470.5	protein_coding	207032579,207027494,207024887,207018521	207032747,207027679,207025064,207023480	Gene ID= ENSG00000182795.12 TPM= 92.24 Transcript Type= protein_coding
chr1	207020695	207032756	207020695	207032756	-	ENST00000461135.2@C1orf116	ENST00000461135.2	protein_coding	207032579,207024887,207020695	207032756,207025064,207023480	Gene ID= ENSG00000182795.12 TPM= 59.55 Transcript Type= protein_coding
chr1	207043849	207051077	207043849	207051077	-	ENST00000315927.8@YOD1	ENST00000315927.8	protein_coding	207050688,207043849	207051077,207049723	Gene ID= ENSG00000180667.10 TPM= 11.68 Transcript Type= protein_coding
chr1	207064922	207080964	207064922	207080964	+	transcript12512.chr1.nnic@PFKFB2	transcript12512.chr1.nnic	protein_coding	207064922,207067499,207068163,207069424,207070280,207071188,207071509,207078954	207065294,207067706,207068309,207069528,207070409,207071250,207071573,207080964	Gene ID= ENSG00000123836.14 TPM= 2.34 Transcript Type= NA
chr1	207053311	207081024	207053311	207081024	+	ENST00000367079.3@PFKFB2	ENST00000367079.3	protein_coding	207053311,207054701,207061953,207062620,207063143,207063347,207063773,207065036,207067499,207068163,207069424,207070280,207071188,207071509,207078954	207053366,207054802,207062078,207062716,207063209,207063421,207063829,207065160,207067706,207068309,207069528,207070409,207071250,207071573,207081024	Gene ID= ENSG00000123836.14 TPM= 7.01 Transcript Type= protein_coding
chr1	207088842	207099993	207088842	207099993	+	ENST00000367078.7@C4BPB	ENST00000367078.7	protein_coding	207088842,207089482,207090308,207091644,207096522,207098150,207099789	207088946,207089589,207090481,207091820,207096615,207098264,207099993	Gene ID= ENSG00000123843.12 TPM= 4.67 Transcript Type= protein_coding
chr1	207104200	207144972	207104200	207144972	+	transcript12520.chr1.nic@C4BPA	transcript12520.chr1.nic	protein_coding	207104200,207112899,207114100,207115416,207123922,207124175,207126713,207131546,207134404,207141106,207143818,207144544	207104430,207113167,207114285,207115515,207124007,207124366,207126895,207131740,207134592,207141276,207143993,207144972	Gene ID= ENSG00000123838.10 TPM= 24.52 Transcript Type= NA
chr1	207104262	207144972	207104262	207144972	+	ENST00000367070.7@C4BPA	ENST00000367070.7	protein_coding	207104262,207113001,207114100,207115416,207123922,207124175,207126713,207131546,207134404,207141106,207143818,207144544	207104430,207113167,207114285,207115515,207124007,207124366,207126895,207131740,207134592,207141276,207143993,207144972	Gene ID= ENSG00000123838.10 TPM= 191.49 Transcript Type= protein_coding
chr1	207321508	207360966	207321508	207360966	+	ENST00000367064.7@CD55	ENST00000367064.7	protein_coding	207321508,207322382,207324559,207325622,207326752,207331108,207336693,207337329,207339397,207359546	207321865,207322567,207324750,207325721,207326837,207331296,207336818,207337409,207339417,207360966	Gene ID= ENSG00000196352.14 TPM= 65.9 Transcript Type= protein_coding
chr1	207321532	207340766	207321532	207340766	+	ENST00000367063.6@CD55	ENST00000367063.6	protein_coding	207321532,207322382,207324559,207325622,207326752,207331108,207336693,207337329,207339397,207340391	207321865,207322567,207324750,207325721,207326837,207331296,207336818,207337409,207339417,207340766	Gene ID= ENSG00000196352.14 TPM= 65.51 Transcript Type= protein_coding
chr1	207321701	207360501	207321701	207360501	+	ENST00000314754.12@CD55	ENST00000314754.12	protein_coding	207321701,207322382,207324559,207325622,207326752,207331108,207336693,207337329,207339397,207340391,207359546	207321865,207322567,207324750,207325721,207326837,207331296,207336818,207337409,207339417,207340508,207360501	Gene ID= ENSG00000196352.14 TPM= 64.35 Transcript Type= protein_coding
chr1	207321687	207337659	207321687	207337659	+	ENST00000488171.5@CD55	ENST00000488171.5	protein_coding	207321687,207322382,207324559,207325622,207326752,207331108,207336693,207337329	207321865,207322567,207324750,207325721,207326837,207331296,207336818,207337659	Gene ID= ENSG00000196352.14 TPM= 1.3 Transcript Type= retained_intron
chr1	207359518	207363203	207359518	207363203	-	transcript12567.chr1.nnic@NA	transcript12567.chr1.nnic	NA	207359518	207363203	Gene ID= novel_gene_chr1_12568 TPM= 15.56 Transcript Type= NA
chr1	207321679	207367291	207321679	207367291	+	transcript12570.chr1.nnic@CD55	transcript12570.chr1.nnic	protein_coding	207321679,207322382,207324559,207325622,207326752,207331108,207336693,207337329,207339397,207365717	207321865,207322567,207324750,207325721,207326837,207331296,207336818,207337409,207339417,207367291	Gene ID= ENSG00000196352.14 TPM= 2.34 Transcript Type= NA
chr1	207752037	207795506	207752037	207795506	+	transcript12580.chr1.nic@CD46	transcript12580.chr1.nic	protein_coding	207752037,207757014,207757540,207759639,207761249,207767013,207767779,207770321,207783292,207785071,207785656,207793519	207752309,207757202,207757642,207759724,207761446,207767195,207767823,207770362,207783330,207785106,207785682,207795506	Gene ID= ENSG00000117335.19 TPM= 14.74 Transcript Type= NA
chr1	207752037	207795506	207752037	207795506	+	transcript12594.chr1.nic@CD46	transcript12594.chr1.nic	protein_coding	207752037,207757014,207757540,207759639,207761249,207767013,207770321,207783292,207785071,207785619,207793519	207752309,207757202,207757642,207759724,207761446,207767823,207770362,207783330,207785106,207785682,207795506	Gene ID= ENSG00000117335.19 TPM= 24.96 Transcript Type= NA
chr1	207752057	207795513	207752057	207795513	+	ENST00000367042.5@CD46	ENST00000367042.5	protein_coding	207752057,207757014,207757540,207759639,207761249,207767013,207767779,207770321,207783292,207785071,207785619,207790253,207793519	207752309,207757202,207757642,207759724,207761446,207767195,207767823,207770362,207783330,207785106,207785682,207790345,207795513	Gene ID= ENSG00000117335.19 TPM= 99.07 Transcript Type= protein_coding
chr1	207752057	207795513	207752057	207795513	+	ENST00000354848.5@CD46	ENST00000354848.5	protein_coding	207752057,207757014,207757540,207759639,207761249,207767013,207767779,207770321,207783292,207785071,207785619,207793519	207752309,207757202,207757642,207759724,207761446,207767195,207767823,207770362,207783330,207785106,207785682,207795513	Gene ID= ENSG00000117335.19 TPM= 301.3 Transcript Type= protein_coding
chr1	207752057	207795513	207752057	207795513	+	ENST00000357714.5@CD46	ENST00000357714.5	protein_coding	207752057,207757014,207757540,207759639,207761249,207767013,207770321,207783292,207785071,207785619,207793519	207752309,207757202,207757642,207759724,207761446,207767195,207770362,207783330,207785106,207785682,207795513	Gene ID= ENSG00000117335.19 TPM= 123.04 Transcript Type= protein_coding
chr1	207752057	207795513	207752057	207795513	+	ENST00000322875.8@CD46	ENST00000322875.8	protein_coding	207752057,207757014,207757540,207759639,207761249,207767013,207767607,207767779,207770321,207783292,207785071,207785619,207793519	207752309,207757202,207757642,207759724,207761446,207767195,207767651,207767823,207770362,207783330,207785106,207785682,207795513	Gene ID= ENSG00000117335.19 TPM= 10.95 Transcript Type= protein_coding
chr1	207752057	207795513	207752057	207795513	+	ENST00000367041.5@CD46	ENST00000367041.5	protein_coding	207752057,207757014,207757540,207759639,207761249,207767013,207770321,207783292,207785071,207785619,207790253,207793519	207752309,207757202,207757642,207759724,207761446,207767195,207770362,207783330,207785106,207785682,207790345,207795513	Gene ID= ENSG00000117335.19 TPM= 46.91 Transcript Type= protein_coding
chr1	207752115	207795506	207752115	207795506	+	ENST00000360212.6@CD46	ENST00000360212.6	protein_coding	207752115,207757014,207757540,207759639,207761249,207767013,207783292,207785071,207785619,207793519	207752309,207757202,207757642,207759724,207761446,207767195,207783330,207785106,207785682,207795506	Gene ID= ENSG00000117335.19 TPM= 5.58 Transcript Type= protein_coding
chr1	207752057	207795513	207752057	207795513	+	ENST00000358170.6@CD46	ENST00000358170.6	protein_coding	207752057,207757014,207757540,207759639,207761249,207767013,207767607,207767779,207770321,207783292,207785071,207785619,207790253,207793519	207752309,207757202,207757642,207759724,207761446,207767195,207767651,207767823,207770362,207783330,207785106,207785682,207790345,207795513	Gene ID= ENSG00000117335.19 TPM= 2.55 Transcript Type= protein_coding
chr1	207754858	207759147	207754858	207759147	-	transcript12607.chr1.nnic@NA	transcript12607.chr1.nnic	NA	207754858	207759147	Gene ID= novel_gene_chr1_12608 TPM= 5.84 Transcript Type= NA
chr1	207837630	207841626	207837630	207841626	+	transcript12611.chr1.nnic@NA	transcript12611.chr1.nnic	NA	207837630	207841626	Gene ID= novel_gene_chr1_12612 TPM= 5.84 Transcript Type= NA
chr1	207880972	207911402	207880972	207911402	-	ENST00000310833.11@CD34	ENST00000310833.11	protein_coding	207911002,207899821,207898973,207897493,207889465,207889161,207888682,207880972	207911402,207900003,207899226,207897573,207889621,207889213,207888846,207887923	Gene ID= ENSG00000174059.16 TPM= 79.4 Transcript Type= protein_coding
chr1	207886539	207911402	207886539	207911402	-	ENST00000356522.4@CD34	ENST00000356522.4	protein_coding	207911002,207899821,207898973,207897493,207889465,207889161,207888682,207886539	207911402,207900003,207899226,207897573,207889621,207889213,207888846,207888118	Gene ID= ENSG00000174059.16 TPM= 42.03 Transcript Type= protein_coding
chr1	207910486	207917115	207910486	207917115	+	transcript12618.chr1.nnic@NA	transcript12618.chr1.nnic	NA	207910486,207910655,207913983	207910557,207910838,207917115	Gene ID= novel_gene_chr1_12619 TPM= 2.34 Transcript Type= NA
chr1	208209987	208244384	208209987	208244384	-	transcript12628.chr1.nic@PLXNA2	transcript12628.chr1.nic	protein_coding	208243643,208216735,208209987	208244384,208218002,208210462	Gene ID= ENSG00000076356.6 TPM= 16.35 Transcript Type= NA
chr1	208214220	208244384	208214220	208244384	-	transcript12629.chr1.nic@PLXNA2	transcript12629.chr1.nic	protein_coding	208243643,208214220	208244384,208218002	Gene ID= ENSG00000076356.6 TPM= 3.5 Transcript Type= NA
chr1	208022242	208244320	208022242	208244320	-	ENST00000367033.3@PLXNA2	ENST00000367033.3	protein_coding	208243643,208216735,208210280,208142329,208103147,208098846,208096730,208096029,208092786,208084380,208082412,208079260,208060686,208054421,208052327,208051256,208051009,208045878,208045067,208044508,208043061,208042098,208039992,208039621,208038825,208038371,208034493,208033319,208031590,208028830,208028009,208022242	208244320,208218002,208210462,208142463,208103247,208098969,208096883,208096125,208092900,208084580,208082508,208079450,208060837,208054538,208052463,208051423,208051102,208046117,208045210,208044742,208043203,208042366,208040058,208039767,208038984,208038474,208034592,208033509,208031759,208029042,208028159,208027338	Gene ID= ENSG00000076356.6 TPM= 39.7 Transcript Type= protein_coding
chr1	208235881	208239166	208235881	208239166	+	transcript12630.chr1.nnic@NA	transcript12630.chr1.nnic	NA	208235881	208239166	Gene ID= novel_gene_chr1_12631 TPM= 2.34 Transcript Type= NA
chr1	208265890	208266777	208265890	208266777	-	transcript12632.chr1.nnic@NA	transcript12632.chr1.nnic	NA	208265890	208266777	Gene ID= novel_gene_chr1_12633 TPM= 2.34 Transcript Type= NA
chr1	209428819	209432547	209428819	209432547	+	transcript12635.chr1.nnic@NA	transcript12635.chr1.nnic	NA	209428819	209432547	Gene ID= novel_gene_chr1_12636 TPM= 2.34 Transcript Type= NA
chr1	209583729	209613938	209583729	209613938	+	ENST00000361322.2@CAMK1G	ENST00000361322.2	protein_coding	209583729,209594955,209599983,209603214,209605536,209606320,209607858,209608980,209609851,209611465,209611792,209612785,209613040	209583772,209595075,209600111,209603288,209605674,209606443,209607933,209609092,209609929,209611552,209612216,209612912,209613938	Gene ID= ENSG00000008118.9 TPM= 1.17 Transcript Type= protein_coding
chr1	209614875	209652963	209614875	209652963	-	transcript12642.chr1.nnic@LAMB3	transcript12642.chr1.nnic	protein_coding	209652369,209650917,209649964,209638534,209637908,209633070,209632583,209630615,209629737,209628035,209627383,209626867,209625648,209623840,209623505,209622982,209622536,209618452,209617907,209617410,209616471,209614875	209652963,209650981,209650118,209638648,209637981,209633133,209632776,209630735,209629925,209628190,209627579,209626978,209626026,209624000,209623725,209623179,209622680,209618659,209618048,209617586,209616624,209615407	Gene ID= ENSG00000196878.14 TPM= 63.63 Transcript Type= NA
chr1	209614870	209652466	209614870	209652466	-	ENST00000356082.8@LAMB3	ENST00000356082.8	protein_coding	209652369,209650917,209649964,209638534,209637908,209634447,209633070,209632583,209630615,209629737,209628035,209627383,209626867,209625648,209623840,209623505,209622982,209622536,209618452,209617907,209617410,209616471,209614870	209652466,209650981,209650118,209638648,209637981,209634638,209633133,209632776,209630735,209629925,209628190,209627579,209626978,209626026,209624000,209623725,209623179,209622680,209618659,209618048,209617586,209616624,209615407	Gene ID= ENSG00000196878.14 TPM= 161.71 Transcript Type= protein_coding
chr1	209675420	209676388	209675420	209676388	+	ENST00000367029.4@G0S2	ENST00000367029.4	protein_coding	209675420,209675653	209675549,209676388	Gene ID= ENSG00000123689.5 TPM= 101.58 Transcript Type= protein_coding
chr1	209686180	209734949	209686180	209734949	+	ENST00000367028.6@HSD11B1	ENST00000367028.6	protein_coding	209686180,209704895,209705811,209706709,209706943,209732436,209734304	209686285,209705030,209705941,209706820,209707128,209732579,209734949	Gene ID= ENSG00000117594.9 TPM= 4.67 Transcript Type= protein_coding
chr1	209704846	209734950	209704846	209734950	+	ENST00000367027.4@HSD11B1	ENST00000367027.4	protein_coding	209704846,209705811,209706709,209706943,209732436,209734304	209705030,209705941,209706820,209707128,209732579,209734950	Gene ID= ENSG00000117594.9 TPM= 15.18 Transcript Type= protein_coding
chr1	209756049	209782315	209756049	209782315	+	ENST00000367025.7@TRAF3IP3	ENST00000367025.7	protein_coding	209756049,209759034,209759982,209762515,209762813,209763068,209763363,209763492,209772948,209775349,209775599,209777352,209778111,209779315,209780470,209781345,209782056	209756309,209759134,209760384,209762662,209762870,209763092,209763392,209763587,209773019,209775489,209775736,209777487,209778173,209779374,209780606,209781458,209782315	Gene ID= ENSG00000009790.14 TPM= 4.67 Transcript Type= protein_coding
chr1	209768488	209779656	209768488	209779656	+	ENST00000367023.5@TRAF3IP3	ENST00000367023.5	protein_coding	209768488,209772948,209775349,209775599,209777352,209778111,209779315	209768660,209773019,209775489,209775736,209777487,209778173,209779656	Gene ID= ENSG00000009790.14 TPM= 2.34 Transcript Type= protein_coding
chr1	209756179	209782320	209756179	209782320	+	ENST00000367026.7@TRAF3IP3	ENST00000367026.7	protein_coding	209756179,209759034,209759982,209762515,209762813,209763068,209763363,209763492,209772948,209775349,209775599,209777352,209778111,209779315,209780470,209781345,209782056	209756309,209759134,209760324,209762662,209762870,209763092,209763392,209763587,209773019,209775489,209775736,209777487,209778173,209779374,209780606,209781458,209782320	Gene ID= ENSG00000009790.14 TPM= 1.17 Transcript Type= protein_coding
chr1	209779208	209784559	209779208	209784559	-	ENST00000294811.2@C1orf74	ENST00000294811.2	protein_coding	209784378,209779208	209784559,209783709	Gene ID= ENSG00000162757.4 TPM= 2.34 Transcript Type= protein_coding
chr1	209785691	209806188	209785691	209806188	-	transcript12670.chr1.nnic@IRF6	transcript12670.chr1.nnic	protein_coding	209806109,209801972,209801240,209796348,209795290,209792269,209790495,209789667,209785691	209806188,209802043,209801416,209796552,209795418,209792427,209790887,209789785,209788644	Gene ID= ENSG00000117595.10 TPM= 2.34 Transcript Type= NA
chr1	209785691	209806044	209785691	209806044	-	ENST00000367021.7@IRF6	ENST00000367021.7	protein_coding	209805947,209801972,209801240,209796348,209795290,209792269,209790495,209789667,209785691	209806044,209802043,209801416,209796552,209795418,209792427,209790887,209789785,209788644	Gene ID= ENSG00000117595.10 TPM= 7.01 Transcript Type= protein_coding
chr1	210231456	210232972	210231456	210232972	-	ENST00000475406.5@SERTAD4-AS1	ENST00000475406.5	antisense_RNA	210232698,210231456	210232972,210231771	Gene ID= ENSG00000203706.8 TPM= 1.17 Transcript Type= antisense_RNA
chr1	210328252	210676296	210328252	210676296	+	ENST00000413764.6@HHAT	ENST00000413764.6	protein_coding	210328252,210348933,210362852,210387468,210400468,210404464,210418154,210464505,210513153,210587898,210623526,210674288	210328384,210349066,210362919,210387581,210400662,210404679,210418325,210464655,210513188,210588099,210623670,210676296	Gene ID= ENSG00000054392.12 TPM= 2.34 Transcript Type= protein_coding
chr1	210328953	210676296	210328953	210676296	+	ENST00000261458.7@HHAT	ENST00000261458.7	protein_coding	210328953,210348933,210362852,210387468,210400468,210404464,210418154,210464505,210513153,210587898,210623526,210674288	210329104,210349066,210362919,210387581,210400662,210404679,210418325,210464655,210513188,210588099,210623670,210676296	Gene ID= ENSG00000054392.12 TPM= 3.5 Transcript Type= protein_coding
chr1	211259279	211314591	211259279	211314591	+	ENST00000367006.8@RCOR3	ENST00000367006.8	protein_coding	211259279,211260108,211271232,211274210,211276257,211278117,211279238,211289178,211295676,211304083,211313424	211259726,211260164,211271309,211274262,211276418,211278241,211279316,211289396,211295753,211304140,211314591	Gene ID= ENSG00000117625.13 TPM= 7.01 Transcript Type= protein_coding
chr1	211259403	211277122	211259403	211277122	+	transcript12708.chr1.nic@RCOR3	transcript12708.chr1.nic	protein_coding	211259403,211260108,211271232,211274210	211259726,211260164,211271309,211277122	Gene ID= ENSG00000117625.13 TPM= 2.34 Transcript Type= NA
chr1	211259349	211261200	211259349	211261200	+	transcript12709.chr1.nnic@RCOR3	transcript12709.chr1.nnic	protein_coding	211259349,211260108,211260866	211259726,211260164,211261200	Gene ID= ENSG00000117625.13 TPM= 2.34 Transcript Type= NA
chr1	211259388	211313298	211259388	211313298	+	ENST00000452621.6@RCOR3	ENST00000452621.6	protein_coding	211259388,211260108,211271232,211274210,211276257,211278117,211279238,211289178,211295676,211304083,211312720	211259726,211260164,211271309,211274262,211276418,211278241,211279316,211289396,211295753,211304140,211313298	Gene ID= ENSG00000117625.13 TPM= 3.5 Transcript Type= protein_coding
chr1	211326837	211374946	211326837	211374946	+	ENST00000261464.9@TRAF5	ENST00000261464.9	protein_coding	211326837,211353239,211354410,211356367,211359912,211360702,211361088,211365376,211369452,211371302,211372128	211326889,211353457,211354467,211356468,211360076,211360779,211361162,211365468,211369592,211371470,211374946	Gene ID= ENSG00000082512.14 TPM= 1.17 Transcript Type= protein_coding
chr1	211382803	211435333	211382803	211435333	+	ENST00000423222.5@LINC00467	ENST00000423222.5	lincRNA	211382803,211391616,211391827,211396767,211426211,211432319	211382925,211391697,211391976,211396831,211426283,211435333	Gene ID= ENSG00000153363.12 TPM= 4.67 Transcript Type= lincRNA
chr1	211744980	211830809	211744980	211830809	-	transcript12726.chr1.nnic@LPGAT1	transcript12726.chr1.nnic	protein_coding	211830573,211830183,211829059,211793072,211787632,211783229,211778918,211750961,211744980	211830809,211830330,211829323,211793190,211787727,211783502,211779044,211751067,211750050	Gene ID= ENSG00000123684.12 TPM= 4.67 Transcript Type= NA
chr1	211744980	211830395	211744980	211830395	-	transcript12728.chr1.nnic@LPGAT1	transcript12728.chr1.nnic	protein_coding	211830183,211829059,211793072,211787632,211783229,211778918,211750961,211744980	211830395,211829323,211793190,211787727,211783502,211779044,211751067,211750050	Gene ID= ENSG00000123684.12 TPM= 3.5 Transcript Type= NA
chr1	211743457	211830772	211743457	211830772	-	ENST00000366997.8@LPGAT1	ENST00000366997.8	protein_coding	211830573,211829059,211793072,211787632,211783229,211778918,211750961,211743457	211830772,211829323,211793190,211787727,211783502,211779044,211751067,211750050	Gene ID= ENSG00000123684.12 TPM= 2.34 Transcript Type= protein_coding
chr1	211940401	212035542	211940401	212035542	-	ENST00000366994.7@INTS7	ENST00000366994.7	protein_coding	212035344,212021083,212020122,212016886,212011375,212007250,212006639,211987886,211982676,211981093,211978272,211976582,211975166,211968513,211967878,211966430,211952569,211946607,211944784,211940401	212035542,212021212,212020268,212017023,212011421,212007449,212006761,211988003,211982810,211981190,211978511,211976719,211975372,211968707,211967981,211966498,211952701,211946705,211944969,211942111	Gene ID= ENSG00000143493.12 TPM= 2.34 Transcript Type= protein_coding
chr1	212051524	212052006	212051524	212052006	-	ENST00000401418.2@RPL21P28	ENST00000401418.2	processed_pseudogene	212051524	212052006	Gene ID= ENSG00000220749.4 TPM= 77.06 Transcript Type= processed_pseudogene
chr1	212285537	212361863	212285537	212361863	+	ENST00000261461.6@PPP2R5A	ENST00000261461.6	protein_coding	212285537,212329135,212333497,212342188,212345803,212347347,212348389,212349189,212356626,212356950,212357157,212358686,212360638	212286291,212329331,212333598,212342280,212345933,212347406,212348497,212349242,212356676,212357069,212357284,212358787,212361863	Gene ID= ENSG00000066027.11 TPM= 85.23 Transcript Type= protein_coding
chr1	212432887	212446379	212432887	212446379	+	ENST00000366988.4@NENF	ENST00000366988.4	protein_coding	212432887,212442565,212444339,212445830	212433120,212442625,212444442,212446379	Gene ID= ENSG00000117691.9 TPM= 16.35 Transcript Type= protein_coding
chr1	212432923	212446372	212432923	212446372	+	ENST00000479589.5@NENF	ENST00000479589.5	protein_coding	212432923,212444339,212445830	212433120,212444442,212446372	Gene ID= ENSG00000117691.9 TPM= 2.34 Transcript Type= processed_transcript
chr1	212608670	212620777	212608670	212620777	+	ENST00000341491.8@ATF3	ENST00000341491.8	protein_coding	212608670,212615018,212618127,212619358	212608930,212615261,212618234,212620777	Gene ID= ENSG00000162772.16 TPM= 29.19 Transcript Type= protein_coding
chr1	212608782	212620777	212608782	212620777	+	transcript12772.chr1.nnic@ATF3	transcript12772.chr1.nnic	protein_coding	212608782,212615018,212618127,212619358	212609271,212615261,212618234,212620777	Gene ID= ENSG00000162772.16 TPM= 2.34 Transcript Type= NA
chr1	212616809	212620777	212616809	212620777	+	transcript12773.chr1.nic@ATF3	transcript12773.chr1.nic	protein_coding	212616809,212619358	212618234,212620777	Gene ID= ENSG00000162772.16 TPM= 2.34 Transcript Type= NA
chr1	212686418	212699985	212686418	212699985	-	ENST00000243440.1@BATF3	ENST00000243440.1	protein_coding	212699673,212696961,212686418	212699985,212697065,212686979	Gene ID= ENSG00000123685.8 TPM= 10.51 Transcript Type= protein_coding
chr1	212736956	212791782	212736956	212791782	-	ENST00000366977.7@NSL1	ENST00000366977.7	protein_coding	212791530,212787559,212784363,212782372,212739534,212736956	212791782,212787637,212784493,212782426,212739601,212738686	Gene ID= ENSG00000117697.14 TPM= 1.17 Transcript Type= protein_coding
chr1	212736966	212791783	212736966	212791783	-	transcript12780.chr1.nnic@NSL1	transcript12780.chr1.nnic	protein_coding	212791530,212787559,212784363,212782372,212766189,212736966	212791783,212787637,212784493,212782426,212766273,212738686	Gene ID= ENSG00000117697.14 TPM= 2.34 Transcript Type= NA
chr1	212791828	212816626	212791828	212816626	+	ENST00000366974.8@TATDN3	ENST00000366974.8	protein_coding	212791828,212795095,212796517,212797112,212802701,212804320,212804596,212807736,212812248,212815013	212791987,212795127,212796590,212797196,212802763,212804429,212804651,212807848,212812328,212816626	Gene ID= ENSG00000203705.10 TPM= 8.17 Transcript Type= protein_coding
chr1	212791884	212816617	212791884	212816617	+	ENST00000366973.8@TATDN3	ENST00000366973.8	protein_coding	212791884,212795095,212796517,212797112,212802701,212804320,212804596,212807736,212812251,212815013	212791987,212795127,212796590,212797196,212802763,212804429,212804651,212807848,212812328,212816617	Gene ID= ENSG00000203705.10 TPM= 2.34 Transcript Type= protein_coding
chr1	212791926	212816626	212791926	212816626	+	ENST00000525574.5@TATDN3	ENST00000525574.5	protein_coding	212791926,212795095,212796517,212802701,212804320,212804596,212807736,212812248,212815013	212791987,212795127,212796590,212802763,212804429,212804651,212807848,212812328,212816626	Gene ID= ENSG00000203705.10 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr1	212856604	212858088	212856604	212858088	-	ENST00000426161.5@FLVCR1-AS1	ENST00000426161.5	lincRNA	212857766,212856604	212858088,212857172	Gene ID= ENSG00000198468.7 TPM= 1.17 Transcript Type= lincRNA
chr1	212992182	213015517	212992182	213015517	-	transcript12810.chr1.nnic@ANGEL2	transcript12810.chr1.nnic	protein_coding	213015226,213013093,213008210,213007129,213005033,213004581,213000786,213000326,212997155,212992182	213015517,213013418,213008466,213007198,213005454,213004700,213000912,213000383,212997318,212995192	Gene ID= ENSG00000174606.13 TPM= 4.09 Transcript Type= NA
chr1	212992182	213015517	212992182	213015517	-	transcript12812.chr1.nic@ANGEL2	transcript12812.chr1.nic	protein_coding	213015226,213013093,213008210,213007129,213005033,213000786,213000326,212997155,212992182	213015517,213013418,213008466,213007198,213005454,213000912,213000383,212997318,212995192	Gene ID= ENSG00000174606.13 TPM= 15.76 Transcript Type= NA
chr1	212992182	213015517	212992182	213015517	-	transcript12823.chr1.nnic@ANGEL2	transcript12823.chr1.nnic	protein_coding	213015226,213013093,213008210,213007129,213005033,213000326,212997155,212992182	213015517,213013418,213008466,213007198,213005454,213000383,212997318,212995192	Gene ID= ENSG00000174606.13 TPM= 4.09 Transcript Type= NA
chr1	212992182	213015826	212992182	213015826	-	ENST00000360506.6@ANGEL2	ENST00000360506.6	protein_coding	213015613,213008210,213007129,213005033,213000786,213000326,212997155,212992182	213015826,213008466,213007198,213005454,213000912,213000383,212997318,212995192	Gene ID= ENSG00000174606.13 TPM= 1.75 Transcript Type= protein_coding
chr1	213006853	213015517	213006853	213015517	-	transcript12827.chr1.nic@ANGEL2	transcript12827.chr1.nic	protein_coding	213015226,213013093,213008210,213006853	213015517,213013418,213008466,213007198	Gene ID= ENSG00000174606.13 TPM= 3.5 Transcript Type= NA
chr1	213000857	213004887	213000857	213004887	+	transcript12829.chr1.nnic@NA	transcript12829.chr1.nnic	NA	213000857	213004887	Gene ID= novel_gene_chr1_12830 TPM= 23.35 Transcript Type= NA
chr1	213051241	213273464	213051241	213273464	+	transcript12831.chr1.nnic@RPS6KC1	transcript12831.chr1.nnic	protein_coding	213051241,213071006,213072870,213077696,213086320,213104454,213117317,213129527,213167858,213176400,213230497,213232123,213240702,213242569,213261558,213262721,213272524	213051509,213071041,213072986,213077816,213086507,213104569,213117410,213129889,213167973,213176492,213230544,213232255,213242297,213242658,213261640,213262816,213273464	Gene ID= ENSG00000136643.11 TPM= 2.34 Transcript Type= NA
chr1	213051233	213273464	213051233	213273464	+	ENST00000614059.4@RPS6KC1	ENST00000614059.4	protein_coding	213051233,213071006,213077696,213104454,213117317,213125766,213129527,213167858,213230497,213232123,213240702,213242569,213261558,213262721,213272524	213051509,213071041,213077816,213104569,213117410,213125843,213129889,213167973,213230544,213232255,213242297,213242658,213261640,213262816,213273464	Gene ID= ENSG00000136643.11 TPM= 1.17 Transcript Type= protein_coding
chr1	213051255	213274773	213051255	213274773	+	ENST00000366959.4@RPS6KC1	ENST00000366959.4	protein_coding	213051255,213077696,213104454,213117317,213129527,213167858,213176400,213230497,213232123,213240702,213242569,213261558,213262721,213272524	213051509,213077816,213104569,213117410,213129889,213167973,213176492,213230544,213232255,213242297,213242658,213261640,213262816,213274773	Gene ID= ENSG00000136643.11 TPM= 2.34 Transcript Type= protein_coding
chr1	214281061	214337131	214281061	214337131	+	transcript12859.chr1.nnic@SMYD2	transcript12859.chr1.nnic	protein_coding	214281061,214305187,214314762,214318079,214318859,214324641,214327622,214330168,214334200,214336704	214281427,214305250,214314872,214318139,214318983,214324708,214327724,214330278,214334308,214337131	Gene ID= ENSG00000143499.13 TPM= 2.34 Transcript Type= NA
chr1	214281233	214337131	214281233	214337131	+	ENST00000366957.9@SMYD2	ENST00000366957.9	protein_coding	214281233,214305187,214314762,214318079,214318859,214324641,214327622,214330168,214330950,214332018,214334200,214336704	214281427,214305250,214314872,214318139,214318983,214324708,214327724,214330278,214331070,214332192,214334308,214337131	Gene ID= ENSG00000143499.13 TPM= 29.19 Transcript Type= protein_coding
chr1	214528276	214551602	214528276	214551602	-	ENST00000491277.1@PTPN14	ENST00000491277.1	protein_coding	214551183,214528276	214551602,214533407	Gene ID= ENSG00000152104.11 TPM= 3.5 Transcript Type= processed_transcript
chr1	215567386	215621807	215567386	215621807	+	transcript12870.chr1.nnic@KCTD3	transcript12870.chr1.nnic	protein_coding	215567386,215573786,215574073,215575901,215577670,215577929,215579000,215579909,215586495,215595356,215601867,215602085,215604132,215608017,215611825,215618886,215619153,215620057	215567768,215573839,215574118,215575974,215577728,215578081,215579137,215579999,215586685,215595471,215601954,215602201,215604302,215608172,215611921,215619070,215619291,215621807	Gene ID= ENSG00000136636.12 TPM= 3.5 Transcript Type= NA
chr1	215567170	215621807	215567170	215621807	+	transcript12873.chr1.nnic@KCTD3	transcript12873.chr1.nnic	protein_coding	215567170,215573786,215574073,215575901,215577670,215578001,215579000,215579909,215586495,215595356,215601867,215602085,215604132,215608017,215611825,215618886,215619153,215620057	215567768,215573839,215574118,215575974,215577728,215578081,215579137,215579999,215586685,215595471,215601954,215602201,215604302,215608145,215611921,215619070,215619291,215621807	Gene ID= ENSG00000136636.12 TPM= 2.34 Transcript Type= NA
chr1	215567392	215621807	215567392	215621807	+	ENST00000259154.8@KCTD3	ENST00000259154.8	protein_coding	215567392,215573786,215574073,215575901,215577670,215578001,215579000,215579909,215586495,215595356,215601867,215602085,215604132,215608017,215611825,215618886,215619153,215620057	215567768,215573839,215574118,215575974,215577728,215578081,215579137,215579999,215586685,215595471,215601954,215602201,215604302,215608172,215611921,215619070,215619291,215621807	Gene ID= ENSG00000136636.12 TPM= 46.7 Transcript Type= protein_coding
chr1	217608184	217631082	217608184	217631082	-	ENST00000366934.3@GPATCH2	ENST00000366934.3	protein_coding	217630916,217619783,217614141,217610889,217610321,217608184	217631082,217620499,217614202,217611071,217610400,217610192	Gene ID= ENSG00000092978.10 TPM= 3.5 Transcript Type= protein_coding
chr1	218285287	218337983	218285287	218337983	+	ENST00000366932.3@RRP15	ENST00000366932.3	protein_coding	218285287,218302294,218305028,218307431,218330948	218285455,218302559,218305125,218307632,218337983	Gene ID= ENSG00000067533.5 TPM= 22.18 Transcript Type= protein_coding
chr1	218346235	218444619	218346235	218444619	+	ENST00000366929.4@TGFB2	ENST00000366929.4	protein_coding	218346235,218363334,218405169,218434082,218434338,218435970,218437343,218441204	218347047,218363417,218405332,218434214,218434448,218436147,218437496,218444619	Gene ID= ENSG00000092969.11 TPM= 1.17 Transcript Type= protein_coding
chr1	219173844	219212865	219173844	219212865	+	ENST00000366928.9@LYPLAL1	ENST00000366928.9	protein_coding	219173844,219179147,219193082,219210532,219211492	219173981,219179246,219193251,219210647,219212865	Gene ID= ENSG00000143353.11 TPM= 4.67 Transcript Type= protein_coding
chr1	219968601	220046658	219968601	220046658	-	ENST00000366923.7@EPRS	ENST00000366923.7	protein_coding	220046343,220040185,220034914,220033502,220032387,220030386,220025132,220024264,220022347,220019988,220018995,220018449,220010946,220007202,220006106,220005248,220001138,219996983,219988590,219987142,219984206,219983189,219982772,219981378,219980756,219980085,219979418,219978546,219973238,219972069,219969058,219968601	220046658,220040269,220035013,220033658,220032526,220030480,220025258,220024456,220022518,220020221,220019079,220018508,220011056,220007338,220006313,220005360,220001255,219997342,219988823,219987404,219984257,219983398,219982844,219981457,219980857,219980240,219979615,219978719,219973398,219972147,219969122,219968956	Gene ID= ENSG00000136628.17 TPM= 86.99 Transcript Type= protein_coding
chr1	219987296	220046451	219987296	220046451	-	ENST00000609181.5@EPRS	ENST00000609181.5	protein_coding	220046343,220040185,220034914,220033502,220032387,220030386,220025132,220024264,220022347,220019988,220018995,220018449,220018126,220010946,220007202,220006106,220005248,220001138,219996983,219988590,219987296	220046451,220040269,220035013,220033658,220032526,220030480,220025258,220024456,220022518,220020221,220019079,220018508,220018146,220011056,220007338,220006313,220005360,220001255,219997342,219988823,219987404	Gene ID= ENSG00000136628.17 TPM= 18.1 Transcript Type= protein_coding
chr1	220094102	220148041	220094102	220148041	+	ENST00000366922.2@IARS2	ENST00000366922.2	protein_coding	220094102,220096104,220100490,220102129,220102363,220102495,220102687,220103447,220105891,220107061,220110786,220114314,220125237,220126750,220134402,220136809,220137918,220139008,220140183,220141803,220142944,220145509,220147493	220094483,220096226,220100649,220102277,220102412,220102604,220102777,220103562,220106060,220107151,220110937,220114474,220125339,220126843,220134510,220136911,220138043,220139139,220140289,220141948,220143134,220145653,220148041	Gene ID= ENSG00000067704.9 TPM= 159.96 Transcript Type= protein_coding
chr1	220150100	220272439	220150100	220272439	-	transcript12926.chr1.nnic@RAB3GAP2	transcript12926.chr1.nnic	protein_coding	220272223,220232799,220213856,220212887,220210955,220210801,220210388,220205907,220202276,220196250,220195298,220195078,220193240,220191068,220190377,220190064,220189703,220185651,220184036,220182714,220182257,220172637,220171889,220170892,220167502,220167293,220164733,220162198,220159386,220157802,220157270,220153968,220153185,220151606,220150100	220272439,220232863,220213979,220212968,220211002,220210876,220210489,220206006,220202374,220196398,220195377,220195167,220193379,220191284,220190520,220190146,220189767,220185741,220184163,220182931,220182354,220172742,220172049,220171120,220167675,220167399,220164799,220162268,220159421,220157876,220157488,220154057,220153406,220151764,220151406	Gene ID= ENSG00000118873.15 TPM= 6.07 Transcript Type= NA
chr1	220150435	220272501	220150435	220272501	-	transcript12930.chr1.nnic@RAB3GAP2	transcript12930.chr1.nnic	protein_coding	220272223,220232799,220213856,220212887,220210955,220210801,220210388,220205907,220202276,220196250,220195298,220195078,220193240,220191068,220190377,220190064,220189703,220185651,220184036,220182714,220182257,220172637,220171889,220170892,220167502,220167293,220164733,220162198,220159386,220157802,220157270,220153968,220153185,220150435	220272501,220232863,220213979,220212968,220211002,220210876,220210489,220206006,220202374,220196398,220195377,220195167,220193379,220191284,220190520,220190146,220189767,220185741,220184163,220182931,220182354,220172742,220172049,220171120,220167675,220167399,220164799,220162268,220159421,220157876,220157488,220154057,220153406,220151764	Gene ID= ENSG00000118873.15 TPM= 2.57 Transcript Type= NA
chr1	220689845	220699157	220689845	220699157	+	ENST00000294889.5@C1orf115	ENST00000294889.5	protein_coding	220689845,220696612	220690711,220699157	Gene ID= ENSG00000162817.6 TPM= 252.2 Transcript Type= protein_coding
chr1	220748264	220784815	220748264	220784815	+	transcript12937.chr1.nnic@MARC2	transcript12937.chr1.nnic	protein_coding	220748264,220754947,220761658,220762910,220770381,220780018,220780168,220781778,220783919	220748803,220755120,220761820,220763050,220770556,220780079,220780239,220781932,220784815	Gene ID= ENSG00000117791.15 TPM= 2.34 Transcript Type= NA
chr1	220748258	220784815	220748258	220784815	+	transcript12940.chr1.nnic@MARC2	transcript12940.chr1.nnic	protein_coding	220748258,220754947,220761658,220762910,220770381,220780018,220781778,220783919	220748803,220755120,220761820,220763050,220770556,220780239,220781932,220784815	Gene ID= ENSG00000117791.15 TPM= 3.5 Transcript Type= NA
chr1	220748258	220784815	220748258	220784815	+	transcript12954.chr1.nic@MARC2	transcript12954.chr1.nic	protein_coding	220748258,220754947,220761658,220762910,220780018,220781778,220783919	220748803,220755120,220761820,220763050,220780239,220781932,220784815	Gene ID= ENSG00000117791.15 TPM= 3.5 Transcript Type= NA
chr1	220748258	220759033	220748258	220759033	+	transcript12969.chr1.nic@MARC2	transcript12969.chr1.nic	protein_coding	220748258,220754947	220748803,220759033	Gene ID= ENSG00000117791.15 TPM= 2.34 Transcript Type= NA
chr1	220748269	220784240	220748269	220784240	+	ENST00000359316.6@MARC2	ENST00000359316.6	protein_coding	220748269,220754947,220761658,220762910,220783919	220748803,220755120,220761820,220763050,220784240	Gene ID= ENSG00000117791.15 TPM= 5.84 Transcript Type= protein_coding
chr1	220748334	220784815	220748334	220784815	+	ENST00000366913.7@MARC2	ENST00000366913.7	protein_coding	220748334,220754947,220761658,220762910,220780018,220780168,220781778,220783919	220748803,220755120,220761820,220763050,220780079,220780239,220781932,220784815	Gene ID= ENSG00000117791.15 TPM= 23.35 Transcript Type= protein_coding
chr1	220786861	220814388	220786861	220814388	+	transcript12958.chr1.nic@MARC1	transcript12958.chr1.nic	protein_coding	220786861,220791491,220796643,220797874,220805052,220805203,220813292	220787219,220791664,220796805,220798065,220805113,220805274,220814388	Gene ID= ENSG00000186205.12 TPM= 2.34 Transcript Type= NA
chr1	220788351	220814388	220788351	220814388	+	transcript12959.chr1.nnic@MARC1	transcript12959.chr1.nnic	protein_coding	220788351,220791491,220796643,220797874,220805052,220805203,220813292	220788442,220791664,220796805,220798014,220805113,220805274,220814388	Gene ID= ENSG00000186205.12 TPM= 4.67 Transcript Type= NA
chr1	220879400	220885059	220879400	220885059	+	ENST00000366903.7@HLX	ENST00000366903.7	protein_coding	220879400,220881194,220882164,220884195	220880449,220881373,220882348,220885059	Gene ID= ENSG00000136630.12 TPM= 43.2 Transcript Type= protein_coding
chr1	222558308	222589913	222558308	222589913	-	ENST00000352967.8@TAF1A	ENST00000352967.8	protein_coding	222589727,222588443,222584128,222579759,222577445,222570535,222569510,222564059,222563173,222561364,222558308	222589913,222588565,222584297,222579872,222577643,222570665,222569668,222564125,222563296,222561518,222558772	Gene ID= ENSG00000143498.17 TPM= 2.34 Transcript Type= protein_coding
chr1	222589962	222593032	222589962	222593032	+	ENST00000413074.1@TAF1A-AS1	ENST00000413074.1	antisense_RNA	222589962,222592166	222590407,222593032	Gene ID= ENSG00000225265.1 TPM= 2.34 Transcript Type= antisense_RNA
chr1	222618081	222666144	222618081	222666144	+	transcript12990.chr1.nic@MIA3	transcript12990.chr1.nic	protein_coding	222618081,222621159,222624768,222627575,222632165,222633104,222645554,222648829,222650292,222650634,222650793,222651977,222652228,222653008,222653228,222654243,222654655,222658722,222659453,222659622,222659734,222659906,222660177,222662056,222662253,222663998,222665309	222618243,222621292,222624854,222630389,222632326,222633249,222645685,222648850,222650380,222650711,222650903,222652048,222652332,222653130,222653339,222654479,222654793,222658823,222659513,222659657,222659801,222660006,222660314,222662124,222662332,222664148,222666144	Gene ID= ENSG00000154305.16 TPM= 2.34 Transcript Type= NA
chr1	222644303	222665823	222644303	222665823	+	ENST00000340535.11@MIA3	ENST00000340535.11	protein_coding	222644303,222645554,222648829,222650292,222650634,222650793,222651977,222652228,222653008,222653228,222654243,222654389,222654655,222658722,222659453,222659622,222659734,222659906,222660177,222662056,222662253,222663998,222665309	222644586,222645685,222648850,222650380,222650711,222650903,222652048,222652332,222653130,222653339,222654298,222654479,222654793,222658823,222659513,222659657,222659801,222660006,222660314,222662124,222662332,222664148,222665823	Gene ID= ENSG00000154305.16 TPM= 11.68 Transcript Type= protein_coding
chr1	222618086	222668012	222618086	222668012	+	ENST00000344922.9@MIA3	ENST00000344922.9	protein_coding	222618086,222621159,222624768,222627575,222632165,222633104,222645554,222648829,222650292,222650634,222650793,222651977,222652228,222653008,222653228,222654243,222654389,222654655,222658722,222659453,222659622,222659734,222659906,222660177,222662056,222662253,222663998,222665309	222618243,222621292,222624854,222630389,222632326,222633249,222645685,222648850,222650380,222650711,222650903,222652048,222652332,222653130,222653339,222654298,222654479,222654793,222658823,222659513,222659657,222659801,222660006,222660314,222662124,222662332,222664148,222668012	Gene ID= ENSG00000154305.16 TPM= 11.68 Transcript Type= protein_coding
chr1	222668159	222712503	222668159	222712503	-	transcript13009.chr1.nic@AIDA	transcript13009.chr1.nic	protein_coding	222712208,222711379,222703148,222694210,222693789,222687595,222686930,222676096,222673313,222670133,222668159	222712503,222711545,222703217,222694263,222693843,222687658,222687036,222676218,222673435,222670250,222669989	Gene ID= ENSG00000186063.12 TPM= 5.84 Transcript Type= NA
chr1	222668013	222712524	222668013	222712524	-	ENST00000340020.10@AIDA	ENST00000340020.10	protein_coding	222712208,222703148,222694210,222693789,222687595,222686930,222676096,222673313,222670133,222668013	222712524,222703217,222694263,222693843,222687658,222687036,222676218,222673435,222670250,222669989	Gene ID= ENSG00000186063.12 TPM= 36.2 Transcript Type= protein_coding
chr1	222711594	222713904	222711594	222713904	+	transcript13018.chr1.nnic@NA	transcript13018.chr1.nnic	NA	222711594	222713904	Gene ID= novel_gene_chr1_13019 TPM= 2.34 Transcript Type= NA
chr1	222712553	222735196	222712553	222735196	+	ENST00000340934.9@BROX	ENST00000340934.9	protein_coding	222712553,222715684,222718925,222719263,222722419,222724092,222725450,222727168,222728743,222729620,222730027,222731357,222732628	222712942,222715800,222719031,222719359,222722514,222724164,222725555,222727257,222728828,222729701,222730177,222731516,222735196	Gene ID= ENSG00000162819.11 TPM= 23.94 Transcript Type= protein_coding
chr1	222713324	222735196	222713324	222735196	+	transcript13006.chr1.nic@BROX	transcript13006.chr1.nic	protein_coding	222713324,222715684,222718925,222719263,222722419,222724092,222725450,222727168,222728743,222729620,222730027,222731357,222732628	222713416,222715800,222719031,222719359,222722514,222724164,222725555,222727257,222728828,222729701,222730177,222731516,222735196	Gene ID= ENSG00000162819.11 TPM= 28.61 Transcript Type= NA
chr1	222815027	222837384	222815027	222837384	+	transcript13028.chr1.nic@AL392172.1	transcript13028.chr1.nic	lincRNA	222815027,222823884,222835119,222836996	222815078,222823945,222835215,222837384	Gene ID= ENSG00000228106.5 TPM= 2.34 Transcript Type= NA
chr1	222815022	222837384	222815022	222837384	+	ENST00000450784.5@AL392172.1	ENST00000450784.5	lincRNA	222815022,222835119,222836996	222815078,222835215,222837384	Gene ID= ENSG00000228106.5 TPM= 1.17 Transcript Type= lincRNA
chr1	222815059	222837382	222815059	222837382	+	ENST00000435378.5@AL392172.1	ENST00000435378.5	lincRNA	222815059,222823856,222827428,222835119,222836996	222815078,222823945,222827601,222835215,222837382	Gene ID= ENSG00000228106.5 TPM= 1.17 Transcript Type= lincRNA
chr1	222823884	222837384	222823884	222837384	+	ENST00000442171.5@AL392172.1	ENST00000442171.5	lincRNA	222823884,222835119,222836996	222823945,222835215,222837384	Gene ID= ENSG00000228106.5 TPM= 1.17 Transcript Type= lincRNA
chr1	222815069	223005995	222815069	223005995	+	transcript13021.chr1.nnic@DISP1	transcript13021.chr1.nnic	protein_coding	222815069,222899781,222942807,222983080,222990625,222991520,222992013,222994885,223002385	222815171,222899865,222943332,222983109,222990748,222991647,222992110,222994982,223005995	Gene ID= ENSG00000154309.8 TPM= 8.76 Transcript Type= NA
chr1	222928424	223005995	222928424	223005995	+	ENST00000284476.7@DISP1	ENST00000284476.7	protein_coding	222928424,222942807,222983080,222990625,222991520,222992013,222994885,223002385	222928570,222943332,222983109,222990748,222991647,222992110,222994982,223005995	Gene ID= ENSG00000154309.8 TPM= 18.1 Transcript Type= protein_coding
chr1	223006275	223011909	223006275	223011909	+	transcript13031.chr1.nnic@NA	transcript13031.chr1.nnic	NA	223006275	223011909	Gene ID= novel_gene_chr1_13032 TPM= 2.34 Transcript Type= NA
chr1	223110243	223143291	223110243	223143291	-	transcript13034.chr1.nnic@TLR5	transcript13034.chr1.nnic	protein_coding	223143196,223141648,223137178,223134682,223134389,223132475,223110243	223143291,223141763,223137263,223134864,223134482,223132639,223113035	Gene ID= ENSG00000187554.11 TPM= 5.25 Transcript Type= NA
chr1	223110243	223143248	223110243	223143248	-	transcript13041.chr1.nnic@TLR5	transcript13041.chr1.nnic	protein_coding	223143196,223137178,223134682,223134389,223132475,223110243	223143248,223137263,223134864,223134482,223132639,223113035	Gene ID= ENSG00000187554.11 TPM= 5.25 Transcript Type= NA
chr1	223110305	223143291	223110305	223143291	-	transcript13051.chr1.nnic@TLR5	transcript13051.chr1.nnic	protein_coding	223143196,223141648,223132475,223110305	223143291,223141763,223132639,223113035	Gene ID= ENSG00000187554.11 TPM= 2.34 Transcript Type= NA
chr1	223220821	223364202	223220821	223364202	-	ENST00000366878.8@SUSD4	ENST00000366878.8	protein_coding	223364057,223363278,223292439,223268502,223264630,223229197,223227594,223223249,223220821	223364202,223363460,223292651,223268675,223264818,223229388,223227738,223223631,223222220	Gene ID= ENSG00000143502.14 TPM= 2.92 Transcript Type= protein_coding
chr1	223234915	223364167	223234915	223364167	-	ENST00000344029.6@SUSD4	ENST00000344029.6	protein_coding	223364057,223363278,223292439,223268502,223264630,223234915	223364167,223363460,223292651,223268675,223264818,223235100	Gene ID= ENSG00000143502.14 TPM= 1.75 Transcript Type= protein_coding
chr1	223541616	223665789	223541616	223665789	-	transcript13062.chr1.nnic@CAPN8	transcript13062.chr1.nnic	protein_coding	223665410,223654330,223628662,223628009,223626989,223625805,223622815,223620192,223616323,223615970,223612246,223609153,223558131,223553832,223550960,223549318,223545231,223544772,223544067,223543108,223541616	223665789,223654399,223628780,223628142,223627157,223625888,223622900,223620266,223619453,223616145,223612257,223609364,223558167,223553900,223551017,223549382,223545299,223544850,223544183,223543166,223541859	Gene ID= ENSG00000203697.11 TPM= 5.84 Transcript Type= NA
chr1	223545822	223665701	223545822	223665701	-	transcript13070.chr1.nic@CAPN8	transcript13070.chr1.nic	protein_coding	223665410,223654330,223628662,223628009,223626989,223625805,223622815,223620192,223619293,223615970,223612246,223609153,223558131,223553832,223550960,223545822	223665701,223654399,223628780,223628142,223627157,223625888,223622900,223620266,223619453,223616145,223612257,223609364,223558167,223553900,223551017,223549382	Gene ID= ENSG00000203697.11 TPM= 8.17 Transcript Type= NA
chr1	223618224	223665789	223618224	223665789	-	transcript13076.chr1.nnic@CAPN8	transcript13076.chr1.nnic	protein_coding	223665410,223654330,223628662,223628009,223626989,223625805,223623875,223622815,223618224	223665789,223654399,223628780,223628142,223627157,223625888,223623995,223622900,223620266	Gene ID= ENSG00000203697.11 TPM= 3.5 Transcript Type= NA
chr1	223621244	223665711	223621244	223665711	-	transcript13086.chr1.nic@CAPN8	transcript13086.chr1.nic	protein_coding	223665410,223654330,223626989,223625805,223621244	223665711,223654399,223628780,223625888,223622900	Gene ID= ENSG00000203697.11 TPM= 3.5 Transcript Type= NA
chr1	223541609	223665734	223541609	223665734	-	ENST00000366872.9@CAPN8	ENST00000366872.9	protein_coding	223665410,223654330,223628662,223628009,223626989,223625805,223622815,223620192,223619293,223615970,223612246,223609153,223558131,223553832,223550960,223549318,223545231,223544772,223544067,223543108,223541609	223665734,223654399,223628780,223628142,223627157,223625888,223622900,223620266,223619453,223616145,223612257,223609364,223558167,223553900,223551017,223549382,223545299,223544850,223544183,223543166,223541859	Gene ID= ENSG00000203697.11 TPM= 5.84 Transcript Type= protein_coding
chr1	223541616	223545374	223541616	223545374	-	ENST00000482401.6@CAPN8	ENST00000482401.6	protein_coding	223544772,223544067,223543108,223541616	223545374,223544183,223543166,223541859	Gene ID= ENSG00000203697.11 TPM= 1.17 Transcript Type= retained_intron
chr1	223611087	223614411	223611087	223614411	+	transcript13089.chr1.nnic@NA	transcript13089.chr1.nnic	NA	223611087	223614411	Gene ID= novel_gene_chr1_13090 TPM= 7.01 Transcript Type= NA
chr1	223701593	223776016	223701593	223776016	+	ENST00000433674.6@CAPN2	ENST00000433674.6	protein_coding	223701593,223717762,223744100,223745306,223746997,223749039,223750890,223751997,223752796,223755480,223757369,223759270,223761581,223762186,223764150,223766367,223769841,223770447,223771809,223772181,223774834	223701831,223717831,223744218,223745439,223747165,223749122,223750975,223752071,223752956,223755649,223757380,223759481,223761617,223762251,223764207,223766431,223769909,223770525,223771925,223772239,223776016	Gene ID= ENSG00000162909.17 TPM= 4.67 Transcript Type= protein_coding
chr1	223712332	223776018	223712332	223776018	+	ENST00000295006.5@CAPN2	ENST00000295006.5	protein_coding	223712332,223717762,223744100,223745306,223746997,223749039,223750890,223751997,223752796,223755480,223757369,223759270,223761581,223762186,223764150,223766367,223769841,223770447,223771809,223772181,223774834	223712877,223717831,223744218,223745439,223747165,223749122,223750975,223752071,223752956,223755649,223757380,223759481,223761617,223762251,223764207,223766431,223769909,223770525,223771925,223772239,223776018	Gene ID= ENSG00000162909.17 TPM= 1217.93 Transcript Type= protein_coding
chr1	223780088	223845953	223780088	223845953	-	transcript13144.chr1.nic@TP53BP2	transcript13144.chr1.nic	protein_coding	223845654,223814240,223810431,223806846,223804174,223803271,223802731,223802116,223800700,223799899,223798215,223795815,223793303,223792389,223789008,223784115,223780088	223845953,223814353,223810513,223806947,223804348,223803452,223802895,223802344,223800810,223800047,223798677,223796590,223793440,223792522,223789174,223784314,223780894	Gene ID= ENSG00000143514.16 TPM= 7.01 Transcript Type= NA
chr1	223779899	223845972	223779899	223845972	-	ENST00000343537.11@TP53BP2	ENST00000343537.11	protein_coding	223845654,223821220,223814240,223810431,223806846,223804174,223803271,223802731,223802116,223800700,223799899,223798215,223795815,223793303,223792389,223789008,223784115,223779899	223845972,223821367,223814353,223810513,223806947,223804348,223803452,223802895,223802344,223800810,223800047,223798677,223796590,223793440,223792522,223789174,223784314,223780894	Gene ID= ENSG00000143514.16 TPM= 8.17 Transcript Type= protein_coding
chr1	223845520	223846709	223845520	223846709	+	transcript13146.chr1.nnic@NA	transcript13146.chr1.nnic	NA	223845520	223846709	Gene ID= novel_gene_chr1_13147 TPM= 4.67 Transcript Type= NA
chr1	223992775	224010608	223992775	224010608	+	transcript13150.chr1.nic@AC138393.1	transcript13150.chr1.nic	transcribed_unprocessed_pseudogene	223992775,224003520,224009320	223993047,224003654,224010608	Gene ID= ENSG00000185495.10 TPM= 3.5 Transcript Type= NA
chr1	224114087	224162047	224114087	224162047	+	ENST00000366862.9@FBXO28	ENST00000366862.9	protein_coding	224114087,224130472,224134074,224153142,224157352	224114396,224130581,224134212,224153337,224162047	Gene ID= ENSG00000143756.11 TPM= 10.51 Transcript Type= protein_coding
chr1	224183228	224193441	224183228	224193441	+	transcript13162.chr1.nic@DEGS1	transcript13162.chr1.nic	protein_coding	224183228,224189577,224191092,224192332	224183418,224190319,224191156,224193441	Gene ID= ENSG00000143753.12 TPM= 2.34 Transcript Type= NA
chr1	224183171	224193441	224183171	224193441	+	ENST00000323699.8@DEGS1	ENST00000323699.8	protein_coding	224183171,224189577,224192332	224183418,224190319,224193441	Gene ID= ENSG00000143753.12 TPM= 58.38 Transcript Type= protein_coding
chr1	224227334	224330170	224227334	224330170	-	ENST00000391875.6@NVL	ENST00000391875.6	protein_coding	224330071,224317878,224317694,224311800,224307991,224305034,224304736,224303723,224300562,224296501,224294267,224289484,224287775,224286026,224281123,224275339,224268034,224250212,224236506,224233201,224231226,224227334	224330170,224317930,224317793,224311857,224308263,224305166,224304812,224303857,224300663,224296618,224294411,224289733,224287993,224286130,224281185,224275458,224268133,224250318,224236582,224233289,224231296,224227670	Gene ID= ENSG00000143748.17 TPM= 5.84 Transcript Type= protein_coding
chr1	224356906	224379452	224356906	224379452	+	transcript13195.chr1.nnic@CNIH4	transcript13195.chr1.nnic	protein_coding	224356906,224360495,224365879,224375795,224378588	224356993,224360563,224365991,224378539,224379452	Gene ID= ENSG00000143771.11 TPM= 4.09 Transcript Type= NA
chr1	224356887	224375998	224356887	224375998	+	ENST00000366860.9@CNIH4	ENST00000366860.9	protein_coding	224356887,224364109,224365879,224371283,224375795	224356993,224364455,224365991,224371423,224375998	Gene ID= ENSG00000143771.11 TPM= 2.34 Transcript Type= processed_transcript
chr1	224356888	224376884	224356888	224376884	+	ENST00000468318.5@CNIH4	ENST00000468318.5	protein_coding	224356888,224365879,224371283,224375795	224357068,224365991,224371423,224376884	Gene ID= ENSG00000143771.11 TPM= 1.17 Transcript Type= processed_transcript
chr1	224356850	224379452	224356850	224379452	+	ENST00000465271.5@CNIH4	ENST00000465271.5	protein_coding	224356850,224360495,224365879,224371283,224375795	224356993,224360563,224365991,224371423,224379452	Gene ID= ENSG00000143771.11 TPM= 18.68 Transcript Type= protein_coding
chr1	224356893	224379452	224356893	224379452	+	ENST00000366856.3@CNIH4	ENST00000366856.3	protein_coding	224356893,224360495,224365879,224371283,224379069	224356993,224360563,224365991,224371423,224379452	Gene ID= ENSG00000143771.11 TPM= 4.67 Transcript Type= protein_coding
chr1	224389136	224434707	224389136	224434707	-	transcript13209.chr1.nic@WDR26	transcript13209.chr1.nic	protein_coding	224433684,224431682,224431525,224424518,224419518,224418260,224411427,224404430,224400950,224398889,224398515,224398097,224393828,224389136	224434707,224431781,224431581,224424654,224419615,224418416,224411565,224404570,224401069,224399034,224398593,224398226,224394013,224389860	Gene ID= ENSG00000162923.14 TPM= 21.02 Transcript Type= NA
chr1	224385143	224434299	224385143	224434299	-	ENST00000414423.6@WDR26	ENST00000414423.6	protein_coding	224433684,224431682,224431477,224424518,224419518,224418260,224411427,224404430,224400950,224398889,224398515,224398097,224393828,224385143	224434299,224431781,224431581,224424654,224419615,224418416,224411565,224404570,224401069,224399034,224398593,224398226,224394013,224389860	Gene ID= ENSG00000162923.14 TPM= 8.17 Transcript Type= protein_coding
chr1	224929661	224967923	224929661	224967923	+	ENST00000366850.7@DNAH14	ENST00000366850.7	protein_coding	224929661,224952670,224954959,224960153,224964479,224967431,224967680	224929835,224952779,224955098,224960302,224964609,224967583,224967923	Gene ID= ENSG00000185842.15 TPM= 1.17 Transcript Type= protein_coding
chr1	225401502	225428116	225401502	225428116	-	transcript13222.chr1.nnic@LBR	transcript13222.chr1.nnic	protein_coding	225427954,225423911,225422077,225419715,225419263,225417984,225415278,225412454,225411337,225406664,225404626,225404404,225401502	225428116,225424089,225422277,225419798,225419452,225418180,225415332,225412645,225411440,225406832,225404706,225404526,225403463	Gene ID= ENSG00000143815.14 TPM= 14.01 Transcript Type= NA
chr1	225401502	225428035	225401502	225428035	-	ENST00000272163.8@LBR	ENST00000272163.8	protein_coding	225427954,225423911,225422077,225419715,225419263,225417984,225415278,225412454,225411337,225410291,225406664,225404626,225404404,225401502	225428035,225424089,225422277,225419798,225419452,225418180,225415332,225412645,225411440,225410416,225406832,225404706,225404526,225403463	Gene ID= ENSG00000143815.14 TPM= 98.08 Transcript Type= protein_coding
chr1	225496720	225653098	225496720	225653098	-	transcript13227.chr1.nnic@ENAH	transcript13227.chr1.nnic	protein_coding	225652686,225600208,225567249,225554906,225530554,225519198,225517196,225514596,225512871,225512657,225511811,225507951,225500992,225498347,225496720	225653098,225600362,225567414,225555083,225530638,225519565,225517306,225514900,225513016,225512714,225511859,225508017,225501070,225498404,225497812	Gene ID= ENSG00000154380.17 TPM= 2.34 Transcript Type= NA
chr1	225777802	225790456	225777802	225790456	+	transcript13236.chr1.nnic@SRP9	transcript13236.chr1.nnic	protein_coding	225777802,225783300,225785260,225789240	225778012,225783368,225785825,225790456	Gene ID= ENSG00000143742.12 TPM= 6.13 Transcript Type= NA
chr1	225777829	225790466	225777829	225790466	+	ENST00000304786.11@SRP9	ENST00000304786.11	protein_coding	225777829,225783300,225789240	225778012,225783368,225790466	Gene ID= ENSG00000143742.12 TPM= 229.14 Transcript Type= protein_coding
chr1	225777837	225790466	225777837	225790466	+	ENST00000366839.8@SRP9	ENST00000366839.8	protein_coding	225777837,225783300,225786862,225789240	225778012,225783368,225786985,225790466	Gene ID= ENSG00000143742.12 TPM= 20.14 Transcript Type= protein_coding
chr1	225779130	225782319	225779130	225782319	-	transcript13247.chr1.nnic@NA	transcript13247.chr1.nnic	NA	225779130	225782319	Gene ID= novel_gene_chr1_13248 TPM= 4.67 Transcript Type= NA
chr1	225825354	225845563	225825354	225845563	+	ENST00000366837.5@EPHX1	ENST00000366837.5	protein_coding	225825354,225828725,225831779,225838654,225839217,225839829,225842366,225844498,225845146	225825544,225828912,225831959,225838881,225839346,225840037,225842474,225844623,225845563	Gene ID= ENSG00000143819.12 TPM= 12.84 Transcript Type= protein_coding
chr1	225810095	225845559	225810095	225845559	+	ENST00000272167.9@EPHX1	ENST00000272167.9	protein_coding	225810095,225828725,225831779,225838654,225839217,225839829,225842366,225844498,225845146	225810169,225828912,225831959,225838881,225839346,225840037,225842474,225844623,225845559	Gene ID= ENSG00000143819.12 TPM= 123.76 Transcript Type= protein_coding
chr1	225837884	225839020	225837884	225839020	-	transcript13282.chr1.nnic@NA	transcript13282.chr1.nnic	NA	225837884	225839020	Gene ID= novel_gene_chr1_13283 TPM= 2.34 Transcript Type= NA
chr1	225840882	225844945	225840882	225844945	-	transcript13276.chr1.nnic@NA	transcript13276.chr1.nnic	NA	225840882	225844945	Gene ID= novel_gene_chr1_13277 TPM= 16.35 Transcript Type= NA
chr1	225840883	225846522	225840883	225846522	-	ENST00000424332.1@AL591895.1	ENST00000424332.1	antisense_RNA	225846480,225840883	225846522,225841187	Gene ID= ENSG00000242861.1 TPM= 3.5 Transcript Type= antisense_RNA
chr1	225845536	225882369	225845536	225882369	-	ENST00000366835.7@TMEM63A	ENST00000366835.7	protein_coding	225882304,225879220,225877395,225874288,225871987,225871076,225867888,225867112,225866574,225865897,225862771,225862455,225862218,225860860,225859196,225856911,225856652,225855878,225853629,225852664,225849912,225848897,225848492,225847034,225845536	225882369,225879410,225877594,225874367,225872053,225871113,225868030,225867163,225866682,225865967,225862851,225862578,225862351,225860997,225859349,225857017,225856738,225855940,225853791,225852769,225850079,225849012,225848554,225847213,225846932	Gene ID= ENSG00000196187.11 TPM= 77.06 Transcript Type= protein_coding
chr1	225919878	225924317	225919878	225924317	-	transcript13289.chr1.nic@PYCR2	transcript13289.chr1.nic	protein_coding	225924044,225922204,225921858,225921552,225921208,225919878	225924317,225923771,225922079,225921644,225921371,225920620	Gene ID= ENSG00000143811.18 TPM= 19.85 Transcript Type= NA
chr1	225919878	225924259	225919878	225924259	-	ENST00000343818.10@PYCR2	ENST00000343818.10	protein_coding	225924044,225923701,225922204,225921858,225921552,225921208,225919878	225924259,225923771,225922383,225922079,225921644,225921371,225920620	Gene ID= ENSG00000143811.18 TPM= 112.09 Transcript Type= protein_coding
chr1	225936604	225941489	225936604	225941489	-	ENST00000366820.9@LEFTY2	ENST00000366820.9	protein_coding	225940891,225939756,225939361,225936604	225941489,225940002,225939600,225937804	Gene ID= ENSG00000143768.12 TPM= 4.67 Transcript Type= protein_coding
chr1	225982702	225999331	225982702	225999331	-	ENST00000272091.7@SDE2	ENST00000272091.7	protein_coding	225999193,225995266,225992891,225992398,225991243,225987896,225982702	225999331,225995383,225993002,225992567,225991363,225988388,225985523	Gene ID= ENSG00000143751.9 TPM= 39.7 Transcript Type= protein_coding
chr1	226062678	226071999	226062678	226071999	+	ENST00000366815.7@H3F3A	ENST00000366815.7	protein_coding	226062678,226064329,226065656,226071351	226062811,226064479,226065809,226071999	Gene ID= ENSG00000163041.9 TPM= 399.32 Transcript Type= protein_coding
chr1	226142795	226143534	226142795	226143534	+	transcript13305.chr1.nnic@NA	transcript13305.chr1.nnic	NA	226142795	226143534	Gene ID= novel_gene_chr1_13306 TPM= 2.34 Transcript Type= NA
chr1	226164790	226186742	226164790	226186742	-	transcript13315.chr1.nic@ACBD3	transcript13315.chr1.nic	protein_coding	226186390,226165859,226164790	226186742,226166000,226164929	Gene ID= ENSG00000182827.8 TPM= 4.67 Transcript Type= NA
chr1	226144679	226186730	226144679	226186730	-	ENST00000366812.5@ACBD3	ENST00000366812.5	protein_coding	226186390,226165859,226164789,226161531,226159184,226154647,226152335,226144679	226186730,226166000,226164929,226161689,226159358,226154833,226152619,226146821	Gene ID= ENSG00000182827.8 TPM= 95.74 Transcript Type= protein_coding
chr1	226231157	226309733	226231157	226309733	-	ENST00000328205.9@LIN9	ENST00000328205.9	protein_coding	226309109,226301173,226297719,226295842,226287664,226286333,226277775,226267957,226266213,226265533,226250839,226238971,226233344,226233096,226231157	226309733,226301205,226297813,226295946,226287797,226286458,226277932,226268090,226266332,226265634,226250919,226239096,226233523,226233193,226232606	Gene ID= ENSG00000183814.15 TPM= 3.5 Transcript Type= protein_coding
chr1	226360691	226408073	226360691	226408073	-	ENST00000366794.9@PARP1	ENST00000366794.9	protein_coding	226407810,226402214,226392199,226390410,226388656,226386326,226385504,226383036,226381068,226379922,226379573,226379142,226377108,226374226,226370434,226368199,226367480,226365954,226365002,226363943,226363099,226361969,226360691	226408073,226402379,226392314,226390624,226388755,226386442,226385680,226383183,226381208,226380164,226379641,226379274,226377303,226374354,226370517,226368321,226367608,226366052,226365154,226364070,226363160,226362083,226361541	Gene ID= ENSG00000143799.12 TPM= 37.36 Transcript Type= protein_coding
chr1	226611241	226739326	226611241	226739326	-	transcript13327.chr1.nnic@ITPKB	transcript13327.chr1.nnic	protein_coding	226739041,226735527,226648672,226647167,226641921,226639557,226637679,226611241	226739326,226737663,226648771,226647380,226642125,226639658,226637750,226611688	Gene ID= ENSG00000143772.9 TPM= 3.89 Transcript Type= NA
chr1	226707190	226739323	226707190	226739323	-	ENST00000366784.1@ITPKB	ENST00000366784.1	protein_coding	226739041,226735527,226707190	226739323,226737663,226707915	Gene ID= ENSG00000143772.9 TPM= 1.55 Transcript Type= protein_coding
chr1	226707596	226739468	226707596	226739468	-	transcript13331.chr1.nnic@ITPKB	transcript13331.chr1.nnic	protein_coding	226739041,226735527,226707596	226739468,226737665,226707915	Gene ID= ENSG00000143772.9 TPM= 10.89 Transcript Type= NA
chr1	226732546	226739326	226732546	226739326	-	transcript13334.chr1.nic@ITPKB	transcript13334.chr1.nic	protein_coding	226739041,226732546	226739326,226737663	Gene ID= ENSG00000143772.9 TPM= 5.84 Transcript Type= NA
chr1	226631689	226635136	226631689	226635136	-	transcript13337.chr1.nnic@NA	transcript13337.chr1.nnic	NA	226631689	226635136	Gene ID= novel_gene_chr1_13338 TPM= 24.52 Transcript Type= NA
chr1	226665562	226669158	226665562	226669158	+	transcript13335.chr1.nnic@NA	transcript13335.chr1.nnic	NA	226665562	226669158	Gene ID= novel_gene_chr1_13336 TPM= 4.67 Transcript Type= NA
chr1	226870627	226896098	226870627	226896098	+	transcript13347.chr1.nic@PSEN2	transcript13347.chr1.nic	protein_coding	226870627,226875365,226881888,226883705,226885538,226888091,226888829,226890035,226891278,226891743,226894007,226895424	226870649,226875550,226882048,226883919,226885679,226888158,226889049,226890133,226891361,226891844,226894125,226896098	Gene ID= ENSG00000143801.16 TPM= 5.55 Transcript Type= NA
chr1	226870641	226896098	226870641	226896098	+	transcript13348.chr1.nic@PSEN2	transcript13348.chr1.nic	protein_coding	226870641,226875365,226881888,226883705,226885538,226888091,226888829,226890035,226891278,226891743,226894007,226895424	226871404,226875550,226882048,226883919,226885679,226888158,226889049,226890133,226891361,226891844,226894125,226896098	Gene ID= ENSG00000143801.16 TPM= 10.22 Transcript Type= NA
chr1	226870563	226896102	226870563	226896102	+	ENST00000366783.7@PSEN2	ENST00000366783.7	protein_coding	226870563,226871262,226875365,226881888,226883705,226885538,226888091,226888829,226890035,226891278,226891743,226894007,226895424	226870649,226871404,226875550,226882048,226883919,226885679,226888158,226889049,226890133,226891361,226891844,226894125,226896102	Gene ID= ENSG00000143801.16 TPM= 30.07 Transcript Type= protein_coding
chr1	226940288	226987544	226940288	226987544	+	ENST00000366777.3@COQ8A	ENST00000366777.3	protein_coding	226940288,226961377,226965000,226965671,226977449,226982027,226982678,226982894,226983552,226983761,226984094,226984548,226984876,226985254,226986453	226940399,226961562,226965410,226965737,226977523,226982149,226982763,226983034,226983633,226983854,226984235,226984655,226984941,226985340,226987544	Gene ID= ENSG00000163050.16 TPM= 99.25 Transcript Type= protein_coding
chr1	227056798	227318507	227056798	227318507	-	transcript13367.chr1.nnic@CDC42BPA	transcript13367.chr1.nnic	protein_coding	227317005,227254064,227213136,227199557,227193786,227160543,227147359,227145489,227142945,227139576,227129109,227119804,227112312,227100992,227091886,227080893,227074259,227073864,227072208,227069777,227056798	227318507,227254155,227213219,227199652,227193934,227160636,227147559,227145737,227143024,227139742,227129231,227119937,227112422,227101239,227091991,227081017,227074364,227074012,227072299,227069853,227057877	Gene ID= ENSG00000143776.18 TPM= 5.25 Transcript Type= NA
chr1	227563549	227679669	227563549	227679669	+	transcript13377.chr1.nic@ZNF678	transcript13377.chr1.nic	protein_coding	227563549,227646544,227650956,227654336,227677179	227563724,227646670,227651076,227654476,227679669	Gene ID= ENSG00000181450.17 TPM= 2.34 Transcript Type= NA
chr1	227563543	227662461	227563543	227662461	+	ENST00000343776.9@ZNF678	ENST00000343776.9	protein_coding	227563543,227646544,227650956,227654336	227563724,227646670,227651076,227662461	Gene ID= ENSG00000181450.17 TPM= 2.34 Transcript Type= protein_coding
chr1	227728635	227734377	227728635	227734377	+	transcript13394.chr1.nnic@SNAP47	transcript13394.chr1.nnic	protein_coding	227728635,227731585,227731996	227728786,227731747,227734377	Gene ID= ENSG00000143740.14 TPM= 22.18 Transcript Type= NA
chr1	227728539	227734352	227728539	227734352	+	ENST00000480897.5@SNAP47	ENST00000480897.5	protein_coding	227728539,227731585,227732389	227728786,227731747,227734352	Gene ID= ENSG00000143740.14 TPM= 7.01 Transcript Type= processed_transcript
chr1	227728549	227734352	227728549	227734352	+	ENST00000480265.1@SNAP47	ENST00000480265.1	protein_coding	227728549,227732389	227728786,227734352	Gene ID= ENSG00000143740.14 TPM= 1.17 Transcript Type= processed_transcript
chr1	227731234	227735411	227731234	227735411	-	ENST00000438896.2@JMJD4	ENST00000438896.2	protein_coding	227735012,227734651,227733907,227733414,227732929,227731234	227735411,227734816,227734032,227733681,227733027,227732676	Gene ID= ENSG00000081692.12 TPM= 4.09 Transcript Type= protein_coding
chr1	227731224	227735283	227731224	227735283	-	ENST00000620518.4@JMJD4	ENST00000620518.4	protein_coding	227735012,227734651,227733907,227733414,227732881,227731224	227735283,227734816,227734032,227733681,227733027,227732676	Gene ID= ENSG00000081692.12 TPM= 19.27 Transcript Type= protein_coding
chr1	227918656	227947898	227918656	227947898	-	ENST00000272164.5@WNT9A	ENST00000272164.5	protein_coding	227947793,227925263,227924138,227918656	227947898,227925519,227924400,227922000	Gene ID= ENSG00000143816.7 TPM= 3.5 Transcript Type= protein_coding
chr1	228006907	228053918	228006907	228053918	+	transcript13406.chr1.nic@WNT3A	transcript13406.chr1.nic	protein_coding	228006907,228022667,228050656	228007199,228022908,228053918	Gene ID= ENSG00000154342.5 TPM= 2.34 Transcript Type= NA
chr1	228007051	228061260	228007051	228061260	+	ENST00000284523.1@WNT3A	ENST00000284523.1	protein_coding	228007051,228022667,228050656,228058986	228007199,228022908,228050921,228061260	Gene ID= ENSG00000154342.5 TPM= 38.53 Transcript Type= protein_coding
chr1	228082660	228099212	228082660	228099212	+	ENST00000272102.9@ARF1	ENST00000272102.9	protein_coding	228082660,228097078,228097342,228097591,228097852	228082765,228097262,228097452,228097715,228099212	Gene ID= ENSG00000143761.15 TPM= 1030.58 Transcript Type= protein_coding
chr1	228082660	228099211	228082660	228099211	+	ENST00000540651.5@ARF1	ENST00000540651.5	protein_coding	228082660,228097078,228097342,228097591,228097852	228082850,228097262,228097452,228097715,228099211	Gene ID= ENSG00000143761.15 TPM= 56.22 Transcript Type= protein_coding
chr1	228083150	228099211	228083150	228099211	+	ENST00000541182.1@ARF1	ENST00000541182.1	protein_coding	228083150,228097078,228097342,228097591,228097852	228083374,228097262,228097452,228097715,228099211	Gene ID= ENSG00000143761.15 TPM= 43.38 Transcript Type= protein_coding
chr1	228082681	228086536	228082681	228086536	+	transcript13428.chr1.nnic@NA	transcript13428.chr1.nnic	NA	228082681	228086536	Gene ID= novel_gene_chr1_13429 TPM= 23.35 Transcript Type= NA
chr1	228100731	228103462	228100731	228103462	-	ENST00000272139.4@C1orf35	ENST00000272139.4	protein_coding	228103134,228102899,228102643,228102478,228102310,228102080,228101339,228100731	228103462,228103049,228102688,228102560,228102382,228102165,228101473,228101254	Gene ID= ENSG00000143793.12 TPM= 36.2 Transcript Type= protein_coding
chr1	228100731	228103320	228100731	228103320	-	ENST00000485896.5@C1orf35	ENST00000485896.5	protein_coding	228103134,228102899,228102643,228102478,228102080,228101339,228100731	228103320,228103049,228102688,228102560,228102382,228101473,228101254	Gene ID= ENSG00000143793.12 TPM= 2.34 Transcript Type= processed_transcript
chr1	228106680	228109312	228106680	228109312	-	ENST00000391867.7@MRPL55	ENST00000391867.7	protein_coding	228109261,228108955,228108437,228108235,228107668,228106680	228109312,228109021,228108474,228108321,228107869,228106918	Gene ID= ENSG00000162910.18 TPM= 1.63 Transcript Type= protein_coding
chr1	228106679	228109299	228106679	228109299	-	ENST00000366746.7@MRPL55	ENST00000366746.7	protein_coding	228109261,228108235,228107668,228106679	228109299,228108318,228107869,228106918	Gene ID= ENSG00000162910.18 TPM= 1.63 Transcript Type= protein_coding
chr1	228106679	228109283	228106679	228109283	-	ENST00000348259.9@MRPL55	ENST00000348259.9	protein_coding	228109149,228108235,228107668,228106679	228109283,228108318,228107869,228106918	Gene ID= ENSG00000162910.18 TPM= 1.63 Transcript Type= protein_coding
chr1	228106679	228109299	228106679	228109299	-	ENST00000295008.8@MRPL55	ENST00000295008.8	protein_coding	228109261,228108955,228108235,228107668,228106679	228109299,228109021,228108318,228107869,228106918	Gene ID= ENSG00000162910.18 TPM= 5.14 Transcript Type= protein_coding
chr1	228106679	228109299	228106679	228109299	-	ENST00000336520.7@MRPL55	ENST00000336520.7	protein_coding	228109149,228108955,228108235,228107668,228106679	228109299,228109021,228108318,228107869,228106918	Gene ID= ENSG00000162910.18 TPM= 8.64 Transcript Type= protein_coding
chr1	228140250	228148946	228140250	228148946	+	transcript13471.chr1.nic@GUK1	transcript13471.chr1.nic	protein_coding	228140250,228141124,228145511,228146026,228146842,228147406,228147615,228148371,228148665	228140363,228141829,228145624,228146067,228146938,228147544,228147699,228148456,228148946	Gene ID= ENSG00000143774.16 TPM= 18.14 Transcript Type= NA
chr1	228140228	228148955	228140228	228148955	+	ENST00000391865.7@GUK1	ENST00000391865.7	protein_coding	228140228,228145511,228146026,228146842,228147406,228147615,228148371,228148665	228140363,228145624,228146067,228146938,228147544,228147699,228148456,228148955	Gene ID= ENSG00000143774.16 TPM= 244.07 Transcript Type= protein_coding
chr1	228140360	228148946	228140360	228148946	+	transcript13487.chr1.nic@GUK1	transcript13487.chr1.nic	protein_coding	228140360,228145511,228146026,228146842,228147406,228147615,228148371,228148665	228141829,228145624,228146067,228146938,228147544,228147699,228148456,228148946	Gene ID= ENSG00000143774.16 TPM= 19.31 Transcript Type= NA
chr1	228140266	228148946	228140266	228148946	+	transcript13495.chr1.nic@GUK1	transcript13495.chr1.nic	protein_coding	228140266,228145511,228146026,228147406,228147615,228148371,228148665	228140363,228145624,228146938,228147544,228147699,228148456,228148946	Gene ID= ENSG00000143774.16 TPM= 18.96 Transcript Type= NA
chr1	228148118	228148955	228148118	228148955	+	ENST00000480056.2@GUK1	ENST00000480056.2	protein_coding	228148118,228148371,228148665	228148284,228148456,228148955	Gene ID= ENSG00000143774.16 TPM= 9.34 Transcript Type= processed_transcript
chr1	228140290	228148946	228140290	228148946	+	ENST00000312726.8@GUK1	ENST00000312726.8	protein_coding	228140290,228141124,228145511,228146026,228146842,228147406,228147615,228148371,228148665	228140363,228141288,228145624,228146067,228146938,228147544,228147699,228148456,228148946	Gene ID= ENSG00000143774.16 TPM= 132.57 Transcript Type= protein_coding
chr1	228140290	228148946	228140290	228148946	+	ENST00000492871.5@GUK1	ENST00000492871.5	protein_coding	228140290,228141124,228145511,228146026,228146861,228147406,228147615,228148371,228148665	228140363,228141288,228145624,228146067,228146938,228147544,228147699,228148456,228148946	Gene ID= ENSG00000143774.16 TPM= 9.62 Transcript Type= processed_transcript
chr1	228140290	228148955	228140290	228148955	+	ENST00000366728.6@GUK1	ENST00000366728.6	protein_coding	228140290,228145511,228146026,228146842,228147406,228147615,228148665	228140363,228145624,228146067,228146938,228147544,228147699,228148955	Gene ID= ENSG00000143774.16 TPM= 18.68 Transcript Type= protein_coding
chr1	228370208	228378874	228370208	228378874	+	transcript13522.chr1.nic@OBSCN	transcript13522.chr1.nic	protein_coding	228370208,228370679,228371023,228373932,228374314,228374585,228375702,228376008,228376793,228377052,228377489,228377931,228378271,228378618	228370238,228370756,228373081,228374012,228374424,228374752,228375824,228376178,228376874,228377291,228377712,228378006,228378420,228378874	Gene ID= ENSG00000154358.20 TPM= 23.35 Transcript Type= NA
chr1	228393676	228406840	228393676	228406840	-	ENST00000284551.10@TRIM11	ENST00000284551.10	protein_coding	228406154,228402066,228400964,228397143,228396947,228393676	228406840,228402161,228401194,228397165,228397047,228395252	Gene ID= ENSG00000154370.15 TPM= 71.22 Transcript Type= protein_coding
chr1	228456979	228457873	228456979	228457873	-	ENST00000366695.3@HIST3H2A	ENST00000366695.3	protein_coding	228456979	228457873	Gene ID= ENSG00000181218.5 TPM= 2.34 Transcript Type= protein_coding
chr1	228487061	228495766	228487061	228495766	+	ENST00000305943.7@RNF187	ENST00000305943.7	protein_coding	228487061,228488960,228493053,228493883	228487878,228489052,228493274,228495766	Gene ID= ENSG00000168159.11 TPM= 234.69 Transcript Type= protein_coding
chr1	228487356	228494969	228487356	228494969	+	transcript13533.chr1.nic@RNF187	transcript13533.chr1.nic	protein_coding	228487356,228488960,228493053	228487878,228489052,228494969	Gene ID= ENSG00000168159.11 TPM= 8.17 Transcript Type= NA
chr1	228735077	228746669	228735077	228746669	+	ENST00000366691.3@RHOU	ENST00000366691.3	protein_coding	228735077,228737673,228743285	228736004,228737731,228746669	Gene ID= ENSG00000116574.5 TPM= 100.41 Transcript Type= protein_coding
chr1	228930145	228949751	228930145	228949751	-	transcript13543.chr1.nnic@NA	transcript13543.chr1.nnic	NA	228949582,228948621,228930145	228949751,228948733,228931934	Gene ID= novel_gene_chr1_13544 TPM= 3.5 Transcript Type= NA
chr1	229271062	229305891	229271062	229305891	+	ENST00000618010.4@RAB4A	ENST00000618010.4	protein_coding	229271062,229295848,229297520,229298977,229302862,229303806	229271370,229295910,229297636,229299072,229302989,229305891	Gene ID= ENSG00000168118.11 TPM= 1.17 Transcript Type= protein_coding
chr1	229321011	229342517	229321011	229342517	-	ENST00000366687.5@CCSAP	ENST00000366687.5	protein_coding	229342099,229326738,229321011	229342517,229327006,229325411	Gene ID= ENSG00000154429.10 TPM= 10.51 Transcript Type= protein_coding
chr1	229334510	229337677	229334510	229337677	+	transcript13565.chr1.nnic@NA	transcript13565.chr1.nnic	NA	229334510	229337677	Gene ID= novel_gene_chr1_13566 TPM= 3.5 Transcript Type= NA
chr1	229516582	229558942	229516582	229558942	-	transcript13582.chr1.nnic@ABCB10	transcript13582.chr1.nnic	protein_coding	229558136,229549234,229542237,229540606,229539456,229531636,229530199,229527229,229525936,229521592,229518841,229516582	229558942,229549434,229542371,229540752,229539591,229531731,229530408,229527308,229526116,229521635,229518875,229518410	Gene ID= ENSG00000135776.4 TPM= 2.34 Transcript Type= NA
chr1	229516582	229558695	229516582	229558695	-	ENST00000344517.4@ABCB10	ENST00000344517.4	protein_coding	229558136,229549234,229547499,229542237,229540606,229539456,229531636,229530199,229527229,229525936,229521592,229518841,229516582	229558695,229549434,229547701,229542371,229540752,229539591,229531731,229530408,229527308,229526116,229521635,229518875,229518410	Gene ID= ENSG00000135776.4 TPM= 50.21 Transcript Type= protein_coding
chr1	229593121	229626047	229593121	229626047	-	ENST00000258281.6@TAF5L	ENST00000258281.6	protein_coding	229625885,229614341,229610106,229602195,229593121	229626047,229614485,229610210,229602919,229595094	Gene ID= ENSG00000135801.9 TPM= 3.5 Transcript Type= protein_coding
chr1	229626234	229660199	229626234	229660199	+	ENST00000258243.6@URB2	ENST00000258243.6	protein_coding	229626234,229627621,229632269,229634917,229643533,229645859,229647510,229651235,229654249,229659100	229626356,229627759,229632445,229638247,229643693,229645969,229647752,229651322,229654388,229660199	Gene ID= ENSG00000135763.9 TPM= 3.5 Transcript Type= protein_coding
chr1	230002730	230007162	230002730	230007162	+	ENST00000445339.1@LINC01736	ENST00000445339.1	lincRNA	230002730,230006773	230002993,230007162	Gene ID= ENSG00000228058.1 TPM= 1.17 Transcript Type= lincRNA
chr1	230067209	230282124	230067209	230282124	+	ENST00000366672.4@GALNT2	ENST00000366672.4	protein_coding	230067209,230178218,230203137,230236014,230236353,230236660,230243306,230246063,230249184,230250457,230255218,230262573,230262922,230265241,230274445,230279303	230067406,230178311,230203290,230236112,230236420,230236725,230243427,230246150,230249271,230250560,230255344,230262665,230263005,230265367,230274564,230282124	Gene ID= ENSG00000143641.9 TPM= 96.91 Transcript Type= protein_coding
chr1	230067259	230092033	230067259	230092033	+	ENST00000488903.1@GALNT2	ENST00000488903.1	protein_coding	230067259,230091589	230067406,230092033	Gene ID= ENSG00000143641.9 TPM= 1.17 Transcript Type= processed_transcript
chr1	230141790	230143820	230141790	230143820	-	transcript13603.chr1.nnic@NA	transcript13603.chr1.nnic	NA	230141790	230143820	Gene ID= novel_gene_chr1_13604 TPM= 2.34 Transcript Type= NA
chr1	230314482	230426371	230314482	230426371	-	ENST00000391860.6@PGBD5	ENST00000391860.6	protein_coding	230425598,230356894,230350958,230337108,230332844,230325310,230314482	230426371,230357321,230351092,230337288,230333041,230325415,230323620	Gene ID= ENSG00000177614.10 TPM= 12.84 Transcript Type= protein_coding
chr1	230702523	230714297	230702523	230714297	-	ENST00000366667.4@AGT	ENST00000366667.4	protein_coding	230714086,230709995,230705933,230704193,230702523	230714297,230710853,230706200,230704337,230703329	Gene ID= ENSG00000135744.7 TPM= 2.34 Transcript Type= protein_coding
chr1	230747384	230801772	230747384	230801772	+	ENST00000366666.6@CAPN9	ENST00000366666.6	protein_coding	230747384,230762653,230767541,230769180,230772014,230774554,230778973,230780179,230780500,230785981,230787522,230790132,230791864,230792426,230792850,230795163,230798162,230801570	230747709,230762786,230767709,230769263,230772099,230774631,230779133,230780336,230780708,230786017,230787602,230790189,230791928,230792494,230792928,230795279,230798220,230801772	Gene ID= ENSG00000135773.12 TPM= 1.55 Transcript Type= protein_coding
chr1	230774592	230801772	230774592	230801772	+	transcript13626.chr1.nnic@CAPN9	transcript13626.chr1.nnic	protein_coding	230774592,230778973,230780179,230780500,230785981,230787522,230790132,230791864,230792426,230792850,230795163,230798162,230801570	230775387,230779133,230780336,230780708,230786017,230787602,230790189,230791928,230792494,230792928,230795279,230798220,230801772	Gene ID= ENSG00000135773.12 TPM= 2.72 Transcript Type= NA
chr1	230747384	230801772	230747384	230801772	+	ENST00000271971.6@CAPN9	ENST00000271971.6	protein_coding	230747384,230755337,230759512,230762653,230767541,230769180,230772014,230774554,230778973,230780179,230780500,230785981,230787522,230790132,230791864,230792426,230792850,230795163,230798162,230801570	230747709,230755406,230759630,230762786,230767709,230769263,230772099,230774631,230779133,230780336,230780708,230786017,230787602,230790189,230791928,230792494,230792928,230795279,230798220,230801772	Gene ID= ENSG00000135773.12 TPM= 7.39 Transcript Type= protein_coding
chr1	230747415	230802003	230747415	230802003	+	ENST00000354537.1@CAPN9	ENST00000354537.1	protein_coding	230747415,230755337,230759512,230762653,230767541,230769180,230772014,230778973,230780179,230780500,230785981,230787522,230790132,230791864,230792426,230792850,230795163,230798162,230801570	230747709,230755406,230759630,230762786,230767709,230769263,230772099,230779133,230780336,230780708,230786017,230787602,230790189,230791928,230792494,230792928,230795279,230798220,230802003	Gene ID= ENSG00000135773.12 TPM= 1.17 Transcript Type= protein_coding
chr1	230837120	230869023	230837120	230869023	-	transcript13630.chr1.nic@C1orf198	transcript13630.chr1.nic	protein_coding	230868812,230868180,230855668,230843354,230837120	230869023,230868402,230855718,230843896,230839908	Gene ID= ENSG00000119280.16 TPM= 54.88 Transcript Type= NA
chr1	230837119	230868653	230837119	230868653	-	ENST00000366663.9@C1orf198	ENST00000366663.9	protein_coding	230868180,230855668,230843354,230837119	230868653,230855718,230843896,230839908	Gene ID= ENSG00000119280.16 TPM= 542.93 Transcript Type= protein_coding
chr1	230906243	230978851	230906243	230978851	-	transcript13639.chr1.nic@TTC13	transcript13639.chr1.nic	protein_coding	230978560,230961209,230958224,230954333,230945389,230943806,230940440,230936158,230933779,230931736,230931298,230928937,230925517,230924841,230923841,230921421,230920510,230916193,230912623,230911470,230908942,230908712,230906243	230978851,230961303,230958299,230954403,230945454,230943898,230940556,230936264,230933861,230931877,230931472,230929093,230925647,230924973,230923933,230921504,230920594,230916302,230912758,230911549,230909020,230908791,230907019	Gene ID= ENSG00000143643.12 TPM= 2.34 Transcript Type= NA
chr1	230906243	230978838	230906243	230978838	-	ENST00000366661.8@TTC13	ENST00000366661.8	protein_coding	230978560,230961209,230958224,230954333,230945389,230943806,230940440,230939386,230933779,230931736,230931298,230928937,230925517,230924841,230923841,230921421,230920510,230916193,230912623,230911470,230908942,230908712,230906243	230978838,230961303,230958299,230954403,230945454,230943898,230940556,230939496,230933861,230931877,230931472,230929093,230925647,230924973,230923933,230921504,230920594,230916302,230912758,230911549,230909020,230908791,230907019	Gene ID= ENSG00000143643.12 TPM= 11.68 Transcript Type= protein_coding
chr1	230979049	231000595	230979049	231000595	+	ENST00000310256.6@ARV1	ENST00000310256.6	protein_coding	230979049,230988320,230990110,230995760,230997121,231000138	230979279,230988439,230990263,230995984,230997267,231000595	Gene ID= ENSG00000173409.13 TPM= 18.68 Transcript Type= protein_coding
chr1	230979072	231000595	230979072	231000595	+	transcript13651.chr1.nnic@ARV1	transcript13651.chr1.nnic	protein_coding	230979072,230988320,230990150,230995760,230997121,231000138	230979279,230988439,230990263,230995984,230997267,231000595	Gene ID= ENSG00000173409.13 TPM= 2.34 Transcript Type= NA
chr1	231018958	231040246	231018958	231040246	-	ENST00000366654.4@FAM89A	ENST00000366654.4	protein_coding	231039921,231018958	231040246,231020126	Gene ID= ENSG00000182118.7 TPM= 119.09 Transcript Type= protein_coding
chr1	231223763	231241178	231223763	231241178	-	ENST00000366651.7@C1orf131	ENST00000366651.7	protein_coding	231241024,231238857,231229150,231226973,231226739,231225471,231223763	231241178,231239188,231229206,231227068,231226825,231225523,231224414	Gene ID= ENSG00000143633.12 TPM= 7.01 Transcript Type= protein_coding
chr1	231223763	231241167	231223763	231241167	-	ENST00000366649.6@C1orf131	ENST00000366649.6	protein_coding	231241024,231238857,231229150,231226973,231226739,231225471,231223763	231241167,231239188,231229209,231227068,231226825,231225523,231224414	Gene ID= ENSG00000143633.12 TPM= 9.34 Transcript Type= protein_coding
chr1	231241198	231277797	231241198	231277797	+	transcript13665.chr1.nnic@GNPAT	transcript13665.chr1.nnic	protein_coding	231241198,231250961,231258222,231260507,231262723,231265293,231265712,231266014,231266277,231267680,231270758,231272312,231273922,231275221,231275405,231276135,231277499	231241456,231251143,231258309,231260683,231262852,231265420,231265787,231266165,231266407,231267903,231271000,231272391,231274062,231275320,231275498,231276196,231277797	Gene ID= ENSG00000116906.11 TPM= 6.04 Transcript Type= NA
chr1	231241214	231277797	231241214	231277797	+	transcript13676.chr1.nic@GNPAT	transcript13676.chr1.nic	protein_coding	231241214,231260507,231262723,231265293,231265712,231266014,231266277,231267680,231270758,231272312,231273922,231275221,231275405,231276135,231277499	231241456,231260683,231262852,231265420,231265787,231266165,231266407,231267903,231271000,231272391,231274062,231275320,231275498,231276196,231277797	Gene ID= ENSG00000116906.11 TPM= 6.04 Transcript Type= NA
chr1	231241198	231268493	231241198	231268493	+	transcript13678.chr1.nic@GNPAT	transcript13678.chr1.nic	protein_coding	231241198,231250961,231260507,231262723,231265293,231265712,231266014,231266277,231267680	231241456,231251143,231260683,231262852,231265420,231265787,231266165,231266407,231268493	Gene ID= ENSG00000116906.11 TPM= 3.5 Transcript Type= NA
chr1	231241210	231277973	231241210	231277973	+	ENST00000366647.8@GNPAT	ENST00000366647.8	protein_coding	231241210,231250961,231260507,231262723,231265293,231265712,231266014,231266277,231267680,231270758,231272312,231273922,231275221,231275405,231276135,231277499	231241456,231251143,231260683,231262852,231265420,231265787,231266165,231266407,231267903,231271000,231272391,231274062,231275320,231275498,231276196,231277973	Gene ID= ENSG00000116906.11 TPM= 9.34 Transcript Type= protein_coding
chr1	231328740	231330013	231328740	231330013	-	transcript13684.chr1.nnic@NA	transcript13684.chr1.nnic	NA	231328740	231330013	Gene ID= novel_gene_chr1_13685 TPM= 2.34 Transcript Type= NA
chr1	231329698	231332402	231329698	231332402	+	transcript13682.chr1.nnic@NA	transcript13682.chr1.nnic	NA	231329698	231332402	Gene ID= novel_gene_chr1_13683 TPM= 11.68 Transcript Type= NA
chr1	231332753	231337852	231332753	231337852	-	ENST00000366645.1@EXOC8	ENST00000366645.1	protein_coding	231332753	231337852	Gene ID= ENSG00000116903.7 TPM= 11.68 Transcript Type= protein_coding
chr1	231337104	231353132	231337104	231353132	+	ENST00000391858.8@SPRTN	ENST00000391858.8	protein_coding	231337104,231339769,231347797,231351304	231338604,231339868,231347925,231353132	Gene ID= ENSG00000010072.15 TPM= 1.17 Transcript Type= protein_coding
chr1	231338048	231355023	231338048	231355023	+	ENST00000295050.11@SPRTN	ENST00000295050.11	protein_coding	231338048,231339769,231347797,231351304,231352610	231338604,231339868,231347925,231351571,231355023	Gene ID= ENSG00000010072.15 TPM= 2.34 Transcript Type= protein_coding
chr1	231363751	231425044	231363751	231425044	-	ENST00000366641.3@EGLN1	ENST00000366641.3	protein_coding	231420998,231373980,231370562,231367569,231363751	231425044,231374099,231370698,231367636,231366475	Gene ID= ENSG00000135766.8 TPM= 90.49 Transcript Type= protein_coding
chr1	231363756	231422338	231363756	231422338	-	transcript13703.chr1.nnic@EGLN1	transcript13703.chr1.nnic	protein_coding	231420998,231373980,231370562,231363756	231422338,231374099,231370698,231366475	Gene ID= ENSG00000135766.8 TPM= 11.09 Transcript Type= NA
chr1	231528653	231566524	231528653	231566524	+	ENST00000366639.8@TSNAX	ENST00000366639.8	protein_coding	231528653,231529255,231537213,231542481,231561128,231564528	231528826,231529359,231537327,231542611,231561255,231566524	Gene ID= ENSG00000116918.13 TPM= 47.87 Transcript Type= protein_coding
chr1	231528676	231564463	231528676	231564463	+	transcript13710.chr1.nic@TSNAX-DISC1	transcript13710.chr1.nic	protein_coding	231528676,231529255,231537213,231542481,231561128	231528826,231529359,231537327,231542611,231564463	Gene ID= ENSG00000270106.5 TPM= 3.5 Transcript Type= NA
chr1	232397968	232630128	232397968	232630128	-	transcript13723.chr1.nnic@SIPA1L2	transcript13723.chr1.nnic	protein_coding	232629869,232608912,232574174,232513857,232493527,232490874,232483792,232479627,232471371,232464840,232460887,232445529,232443602,232441768,232441291,232439108,232432247,232428411,232425589,232415494,232403448,232402392,232397968	232630128,232608988,232574222,232515608,232493660,232491062,232483966,232479730,232471528,232465416,232461161,232445786,232443685,232441868,232441394,232439496,232432471,232428564,232425808,232415625,232403571,232402473,232399273	Gene ID= ENSG00000116991.10 TPM= 14.24 Transcript Type= NA
chr1	232398447	232630162	232398447	232630162	-	transcript13724.chr1.nnic@SIPA1L2	transcript13724.chr1.nnic	protein_coding	232629869,232574174,232533490,232513857,232493527,232490874,232483792,232479627,232471371,232464840,232460887,232445529,232443602,232441768,232441291,232439108,232432247,232428411,232425589,232415494,232403448,232402392,232398447	232630162,232574222,232533583,232515608,232493660,232491062,232483966,232479730,232471528,232465416,232461161,232445786,232443685,232441868,232441394,232439496,232432471,232428564,232425808,232415625,232403571,232402473,232399273	Gene ID= ENSG00000116991.10 TPM= 4.9 Transcript Type= NA
chr1	232397968	232630162	232397968	232630162	-	transcript13729.chr1.nnic@SIPA1L2	transcript13729.chr1.nnic	protein_coding	232629869,232574174,232513857,232493527,232490874,232483792,232479627,232471371,232464840,232460887,232445529,232443602,232441768,232441291,232439108,232432247,232428411,232425589,232415494,232403448,232402392,232397968	232630162,232574222,232515608,232493660,232491062,232483966,232479730,232471528,232465416,232461161,232445786,232443685,232441868,232441394,232439496,232432471,232428564,232425808,232415625,232403571,232402473,232399273	Gene ID= ENSG00000116991.10 TPM= 21.25 Transcript Type= NA
chr1	232465147	232630120	232465147	232630120	-	transcript13735.chr1.nnic@SIPA1L2	transcript13735.chr1.nnic	protein_coding	232629869,232513857,232493527,232490874,232483792,232479627,232471371,232465147	232630120,232515608,232493660,232491062,232483966,232479730,232471528,232465416	Gene ID= ENSG00000116991.10 TPM= 2.57 Transcript Type= NA
chr1	232804892	232808407	232804892	232808407	+	ENST00000418460.2@MAP10	ENST00000418460.2	protein_coding	232804892	232808407	Gene ID= ENSG00000212916.4 TPM= 3.5 Transcript Type= protein_coding
chr1	232950605	232978482	232950605	232978482	+	ENST00000494689.5@NTPCR	ENST00000494689.5	protein_coding	232950605,232956347,232969909,232978163	232950744,232956443,232970118,232978482	Gene ID= ENSG00000135778.11 TPM= 1.17 Transcript Type= processed_transcript
chr1	232950624	232983882	232950624	232983882	+	ENST00000366628.9@NTPCR	ENST00000366628.9	protein_coding	232950624,232955557,232956347,232969909,232978163	232950744,232955719,232956443,232970118,232983882	Gene ID= ENSG00000135778.11 TPM= 5.84 Transcript Type= protein_coding
chr1	232950614	232978751	232950614	232978751	+	ENST00000490807.5@NTPCR	ENST00000490807.5	protein_coding	232950614,232955557,232956347,232978163	232950744,232955719,232956443,232978751	Gene ID= ENSG00000135778.11 TPM= 2.34 Transcript Type= processed_transcript
chr1	232950640	232977528	232950640	232977528	+	ENST00000366627.4@NTPCR	ENST00000366627.4	protein_coding	232950640,232955557,232956347,232969909,232976342	232950744,232955719,232956443,232970118,232977528	Gene ID= ENSG00000135778.11 TPM= 1.17 Transcript Type= protein_coding
chr1	233327768	233385148	233327768	233385148	+	ENST00000366624.7@MAP3K21	ENST00000366624.7	protein_coding	233327768,233346442,233353807,233354836,233362053,233372038,233375916,233376430,233378931,233382305	233328833,233346622,233353955,233355011,233362293,233372160,233376066,233376527,233379710,233385148	Gene ID= ENSG00000143674.10 TPM= 8.17 Transcript Type= protein_coding
chr1	234373701	234384046	234373701	234384046	+	ENST00000366612.1@COA6	ENST00000366612.1	protein_coding	234373701,234383723	234374389,234384046	Gene ID= ENSG00000168275.14 TPM= 1.17 Transcript Type= protein_coding
chr1	234373468	234384048	234373468	234384048	+	ENST00000619305.1@COA6	ENST00000619305.1	protein_coding	234373468,234374230,234383723	234373678,234374389,234384048	Gene ID= ENSG00000168275.14 TPM= 10.51 Transcript Type= protein_coding
chr1	234373683	234384045	234373683	234384045	+	ENST00000366613.1@COA6	ENST00000366613.1	protein_coding	234373683,234374230,234383723	234373840,234374389,234384045	Gene ID= ENSG00000168275.14 TPM= 5.84 Transcript Type= protein_coding
chr1	234391339	234479197	234391339	234479197	-	transcript13767.chr1.nnic@TARBP1	transcript13767.chr1.nnic	protein_coding	234478173,234472714,234471188,234467502,234465656,234463837,234460261,234459230,234457667,234450428,234448480,234446803,234437275,234433410,234430087,234429416,234429136,234427576,234425673,234420702,234418084,234410445,234405903,234401181,234398382,234393646,234393362,234392416,234391339	234479197,234472811,234471257,234467650,234465708,234463934,234460396,234459326,234457756,234450566,234448579,234446975,234437372,234433571,234430301,234429677,234429324,234427766,234425793,234420812,234418233,234410531,234406099,234401262,234398553,234393837,234393486,234392552,234391745	Gene ID= ENSG00000059588.9 TPM= 4.67 Transcript Type= NA
chr1	234391339	234479136	234391339	234479136	-	transcript13769.chr1.nnic@TARBP1	transcript13769.chr1.nnic	protein_coding	234478173,234472714,234471188,234467502,234465656,234463837,234460261,234459230,234457667,234450428,234437275,234433410,234430087,234429416,234429136,234427576,234427317,234425673,234420702,234418084,234410445,234405903,234401181,234398382,234393646,234393362,234392416,234391339	234479136,234472811,234471257,234467650,234465708,234463934,234460396,234459326,234457756,234450566,234437372,234433571,234430301,234429677,234429324,234427766,234427388,234425793,234420812,234418233,234410531,234406099,234401262,234398553,234393837,234393486,234392552,234391745	Gene ID= ENSG00000059588.9 TPM= 2.34 Transcript Type= NA
chr1	234408201	234479137	234408201	234479137	-	transcript13773.chr1.nic@TARBP1	transcript13773.chr1.nic	protein_coding	234478173,234472714,234471188,234467502,234465656,234463837,234460261,234459230,234457667,234450428,234448480,234446803,234437275,234433410,234430087,234429416,234429136,234427576,234427317,234425673,234420702,234418084,234408201	234479137,234472811,234471257,234467650,234465708,234463934,234460396,234459326,234457756,234450566,234448579,234446975,234437372,234433571,234430301,234429677,234429324,234427766,234427388,234425793,234420812,234418233,234410531	Gene ID= ENSG00000059588.9 TPM= 3.5 Transcript Type= NA
chr1	234391313	234479103	234391313	234479103	-	ENST00000040877.1@TARBP1	ENST00000040877.1	protein_coding	234478173,234472714,234471188,234467502,234465656,234463837,234460261,234459230,234457667,234450428,234448480,234446803,234437275,234433410,234430087,234429416,234429136,234427576,234427317,234425673,234420702,234418084,234410445,234405903,234401181,234398382,234393646,234393362,234392416,234391313	234479103,234472811,234471257,234467650,234465708,234463934,234460396,234459326,234457756,234450566,234448579,234446975,234437372,234433571,234430301,234429677,234429324,234427766,234427388,234425793,234420812,234418233,234410531,234406099,234401262,234398553,234393837,234393486,234392552,234391745	Gene ID= ENSG00000059588.9 TPM= 11.68 Transcript Type= protein_coding
chr1	234527891	234531779	234527891	234531779	-	ENST00000435574.1@LINC01354	ENST00000435574.1	lincRNA	234531528,234531026,234527891	234531779,234531181,234530342	Gene ID= ENSG00000231768.1 TPM= 1.17 Transcript Type= lincRNA
chr1	234604269	234609525	234604269	234609525	-	ENST00000366609.3@IRF2BP2	ENST00000366609.3	protein_coding	234608447,234604269	234609525,234607852	Gene ID= ENSG00000168264.10 TPM= 53.13 Transcript Type= protein_coding
chr1	234604269	234609525	234604269	234609525	-	ENST00000366610.7@IRF2BP2	ENST00000366610.7	protein_coding	234608495,234604269	234609525,234607852	Gene ID= ENSG00000168264.10 TPM= 64.8 Transcript Type= protein_coding
chr1	234606747	234609892	234606747	234609892	-	transcript13791.chr1.nnic@NA	transcript13791.chr1.nnic	NA	234606747	234609892	Gene ID= novel_gene_chr1_13792 TPM= 11.68 Transcript Type= NA
chr1	235109336	235128936	235109336	235128936	-	ENST00000366607.4@TOMM20	ENST00000366607.4	protein_coding	235128595,235122326,235119818,235113768,235109336	235128936,235122372,235119899,235113910,235112108	Gene ID= ENSG00000173726.10 TPM= 163.46 Transcript Type= protein_coding
chr1	235131183	235161457	235131183	235161457	-	ENST00000408888.7@RBM34	ENST00000408888.7	protein_coding	235161174,235160893,235160511,235154881,235152706,235148404,235138091,235137877,235136034,235135652,235131183	235161457,235161067,235160647,235155112,235152765,235148447,235138174,235137940,235136073,235135770,235131997	Gene ID= ENSG00000188739.14 TPM= 5.25 Transcript Type= protein_coding
chr1	235131183	235161287	235131183	235161287	-	transcript13808.chr1.nic@RBM34	transcript13808.chr1.nic	protein_coding	235161174,235160893,235154881,235152706,235148404,235138091,235137877,235136034,235135652,235131183	235161287,235161067,235155112,235152765,235148447,235138174,235137940,235136073,235135770,235131997	Gene ID= ENSG00000188739.14 TPM= 2.92 Transcript Type= NA
chr1	235182214	235328225	235182214	235328225	-	transcript13821.chr1.nic@ARID4B	transcript13821.chr1.nic	protein_coding	235327769,235326914,235260642,235257160,235255660,235252730,235246420,235240313,235234413,235231113,235229231,235224703,235223166,235221565,235220302,235219793,235213769,235196031,235194013,235182214	235328225,235326968,235260752,235257225,235255750,235252809,235246511,235240451,235234492,235231189,235229385,235224775,235223260,235221662,235220545,235219968,235214026,235196115,235194211,235182793	Gene ID= ENSG00000054267.21 TPM= 2.34 Transcript Type= NA
chr1	235166895	235328219	235166895	235328219	-	ENST00000349213.7@ARID4B	ENST00000349213.7	protein_coding	235327769,235326914,235260642,235257160,235255660,235252730,235246420,235240313,235234413,235231113,235229231,235224703,235223166,235221565,235220302,235219793,235196031,235194013,235181585,235177800,235175184,235172618,235166895	235328219,235326968,235260752,235257225,235255750,235252809,235246511,235240451,235234492,235231189,235229385,235224775,235223260,235221662,235220545,235219968,235196115,235194211,235182793,235177913,235175399,235172764,235168652	Gene ID= ENSG00000054267.21 TPM= 11.68 Transcript Type= protein_coding
chr1	235328570	235344532	235328570	235344532	+	ENST00000282841.9@GGPS1	ENST00000282841.9	protein_coding	235328570,235335242,235341708,235342011	235328778,235335334,235341778,235344532	Gene ID= ENSG00000152904.11 TPM= 33.86 Transcript Type= protein_coding
chr1	235328571	235343138	235328571	235343138	+	ENST00000391855.2@GGPS1	ENST00000391855.2	protein_coding	235328571,235341708,235342011	235328778,235341778,235343138	Gene ID= ENSG00000152904.11 TPM= 1.17 Transcript Type= protein_coding
chr1	235328573	235331424	235328573	235331424	+	transcript13833.chr1.nnic@NA	transcript13833.chr1.nnic	NA	235328573	235331424	Gene ID= novel_gene_chr1_13834 TPM= 2.34 Transcript Type= NA
chr1	235367360	235448968	235367360	235448968	+	ENST00000366601.7@TBCE	ENST00000366601.7	protein_coding	235367360,235380019,235401503,235414433,235419473,235427140,235430705,235434204,235435745,235436386,235436544,235437322,235438769,235441814,235442852,235448349,235448670	235367504,235380149,235401587,235414618,235419561,235427239,235430804,235434280,235435840,235436450,235436608,235437474,235438922,235441882,235442911,235448440,235448968	Gene ID= ENSG00000116957.12 TPM= 12.84 Transcript Type= protein_coding
chr1	235447213	235504477	235447213	235504477	-	transcript13846.chr1.nic@B3GALNT2	transcript13846.chr1.nic	protein_coding	235504141,235496186,235494681,235489168,235484322,235480054,235470850,235465636,235458603,235455559,235454156,235453090,235447213	235504477,235496308,235494828,235489268,235484515,235480149,235470960,235465714,235458786,235455684,235454315,235453146,235450340	Gene ID= ENSG00000162885.12 TPM= 11.68 Transcript Type= NA
chr1	235449923	235504481	235449923	235504481	-	ENST00000366600.7@B3GALNT2	ENST00000366600.7	protein_coding	235504141,235494681,235489168,235484322,235480054,235470850,235465636,235458603,235455559,235454156,235453090,235449923	235504481,235494828,235489268,235484515,235480149,235470960,235465714,235458786,235455684,235454315,235453146,235450340	Gene ID= ENSG00000162885.12 TPM= 3.5 Transcript Type= protein_coding
chr1	235661041	235866920	235661041	235866920	-	ENST00000389793.6@LYST	ENST00000389793.6	protein_coding	235866843,235833578,235830226,235812971,235808455,235805743,235804504,235802908,235800871,235800320,235793503,235791699,235788701,235787200,235781927,235780865,235777063,235774913,235773842,235770160,235766079,235762720,235758972,235757281,235755478,235753044,235752005,235751210,235746336,235743979,235741422,235734483,235733830,235733503,235731032,235730847,235729596,235728076,235724028,235720661,235716712,235715201,235712057,235709091,235702747,235697083,235693350,235686949,235677480,235677091,235664465,235663984,235661041	235866920,235833667,235830424,235813061,235810534,235806772,235804665,235803064,235801097,235800386,235793612,235792125,235788845,235787373,235782087,235781055,235777308,235775086,235773991,235770297,235766277,235762851,235759599,235757458,235755647,235753274,235752171,235751362,235746527,235744157,235741628,235734659,235733906,235733691,235731177,235730943,235729657,235728131,235724180,235720905,235716778,235715357,235712197,235709308,235702977,235697272,235693486,235687047,235677619,235677188,235664621,235664055,235663078	Gene ID= ENSG00000143669.13 TPM= 5.84 Transcript Type= protein_coding
chr1	235791763	235866937	235791763	235866937	-	transcript13858.chr1.nic@LYST	transcript13858.chr1.nic	protein_coding	235866843,235833578,235830226,235812971,235808455,235805743,235804504,235802908,235800871,235800320,235793503,235791763	235866937,235833667,235830424,235813061,235810534,235806772,235804665,235803064,235801097,235800386,235793612,235792125	Gene ID= ENSG00000143669.13 TPM= 8.17 Transcript Type= NA
chr1	235828805	235867004	235828805	235867004	-	transcript13863.chr1.nic@LYST	transcript13863.chr1.nic	protein_coding	235866843,235833578,235830226,235828805	235867004,235833667,235830424,235829036	Gene ID= ENSG00000143669.13 TPM= 8.17 Transcript Type= NA
chr1	235975830	236065162	235975830	236065162	-	ENST00000264187.6@NID1	ENST00000264187.6	protein_coding	236064855,236048690,236045457,236041910,236038104,236032401,236029550,236025896,236024070,236017148,236013411,236011921,235993645,235990886,235985379,235981611,235980496,235979822,235978995,235975830	236065162,236048989,236045683,236042292,236038253,236032652,236029750,236026141,236024213,236017273,236013560,236012043,235993872,235991058,235985505,235981782,235980653,235979945,235979107,235977988	Gene ID= ENSG00000116962.14 TPM= 67.72 Transcript Type= protein_coding
chr1	236142515	236208884	236142515	236208884	+	transcript13896.chr1.nnic@GPR137B	transcript13896.chr1.nnic	protein_coding	236142515,236168706,236178414,236179879,236183778,236205126,236207133	236143036,236168755,236178636,236180028,236183906,236205250,236208884	Gene ID= ENSG00000077585.13 TPM= 5.84 Transcript Type= NA
chr1	236142532	236208909	236142532	236208909	+	ENST00000366592.7@GPR137B	ENST00000366592.7	protein_coding	236142532,236168706,236178414,236179879,236183778,236205126,236208050	236143036,236168755,236178636,236180028,236183906,236205250,236208909	Gene ID= ENSG00000077585.13 TPM= 44.37 Transcript Type= protein_coding
chr1	236215555	236281985	236215555	236281985	-	ENST00000354619.9@ERO1B	ENST00000354619.9	protein_coding	236281682,236269875,236253422,236252050,236249885,236243422,236236278,236235789,236232828,236230224,236226647,236226269,236225070,236221924,236220832,236215555	236281985,236269994,236253505,236252091,236249967,236243495,236236398,236235835,236232839,236230250,236226739,236226515,236225139,236222010,236220965,236218576	Gene ID= ENSG00000086619.13 TPM= 8.17 Transcript Type= protein_coding
chr1	236523599	236551010	236523599	236551010	+	ENST00000366584.8@LGALS8	ENST00000366584.8	protein_coding	236523599,236525968,236537497,236538879,236540564,236541654,236542761,236543560,236544750,236548012	236524061,236526115,236537585,236539089,236540683,236541710,236542787,236543648,236544915,236551010	Gene ID= ENSG00000116977.18 TPM= 28.02 Transcript Type= protein_coding
chr1	236897647	236902116	236897647	236902116	-	transcript13928.chr1.nnic@NA	transcript13928.chr1.nnic	NA	236897647	236902116	Gene ID= novel_gene_chr1_13929 TPM= 7.01 Transcript Type= NA
chr1	236902063	236903927	236902063	236903927	+	transcript13926.chr1.nnic@NA	transcript13926.chr1.nnic	NA	236902063	236903927	Gene ID= novel_gene_chr1_13927 TPM= 4.67 Transcript Type= NA
chr1	237042205	237833988	237042205	237833988	+	ENST00000366574.6@RYR2	ENST00000366574.6	protein_coding	237042205,237270497,237330878,237355965,237364358,237369534,237374717,237377323,237387281,237388087,237417049,237423092,237441319,237445401,237454391,237456600,237469092,237491806,237492954,237496511,237500711,237503289,237506710,237511688,237530427,237548431,237550544,237566567,237569145,237589793,237590640,237591739,237593476,237595498,237602025,237610762,237614039,237617286,237623765,237625661,237627807,237631427,237633578,237634889,237638357,237639015,237640897,237643327,237648444,237649877,237651411,237654274,237655821,237657944,237659985,237660810,237666512,237667883,237674096,237674731,237678048,237680456,237687455,237698965,237700229,237701978,237705213,237706949,237708858,237709480,237711745,237717198,237718462,237723128,237726273,237727087,237730260,237732046,237733705,237742296,237756288,237757697,237759776,237760955,237770807,237772012,237773520,237778666,237781565,237783675,237785969,237787988,237791429,237792105,237793867,237795289,237798037,237801856,237806137,237808901,237819036,237828381,237830530,237831514,237832552	237042569,237270616,237330982,237355985,237364372,237369608,237374795,237377435,237387380,237388183,237417123,237423248,237441483,237445522,237454574,237456735,237469187,237491924,237493087,237496752,237500903,237503505,237506814,237511791,237530510,237548590,237550691,237566775,237569319,237590001,237590992,237591853,237593636,237595657,237602111,237610988,237614843,237617486,237623870,237625804,237628080,237631541,237633710,237634992,237638492,237639201,237641002,237643447,237648613,237650097,237651501,237654414,237655984,237658022,237660074,237660947,237666589,237667958,237674219,237674846,237678112,237680577,237687504,237699025,237700467,237702059,237705343,237707269,237709098,237709567,237711837,237717368,237718521,237723262,237726308,237727199,237730356,237732149,237733756,237742349,237756387,237757776,237759852,237761028,237770887,237772100,237773648,237778770,237781646,237784972,237786036,237788135,237791515,237792323,237793997,237795331,237798170,237801916,237806283,237809035,237819192,237828445,237830630,237831565,237833988	Gene ID= ENSG00000198626.15 TPM= 1.17 Transcript Type= protein_coding
chr1	239386595	239555287	239386595	239555287	+	transcript13934.chr1.nnic@CHRM3	transcript13934.chr1.nnic	protein_coding	239386595,239492709,239545641,239554751	239387227,239492807,239545749,239555287	Gene ID= ENSG00000133019.11 TPM= 2.34 Transcript Type= NA
chr1	241497603	241519761	241497603	241519761	-	ENST00000366560.3@FH	ENST00000366560.3	protein_coding	241519591,241517182,241513603,241511967,241508603,241506003,241504042,241502443,241500437,241497603	241519761,241517316,241513713,241512143,241508785,241506168,241504245,241502570,241500590,241497970	Gene ID= ENSG00000091483.6 TPM= 12.84 Transcript Type= protein_coding
chr1	241532152	241593459	241532152	241593459	+	transcript13942.chr1.nic@KMO	transcript13942.chr1.nic	protein_coding	241532152,241548829,241549677,241550955,241555612,241560665,241562167,241564987,241566491,241568500,241586679,241588748,241590012,241590204,241591953,241593364	241532498,241548898,241549774,241551044,241555660,241560752,241562332,241565058,241566612,241568647,241586736,241588830,241590113,241590263,241592149,241593459	Gene ID= ENSG00000117009.11 TPM= 2.34 Transcript Type= NA
chr1	241593602	241640399	241593602	241640399	-	transcript13951.chr1.nnic@OPN3	transcript13951.chr1.nnic	protein_coding	241639882,241604260,241600380,241597746,241593602	241640399,241604579,241600653,241597997,241594691	Gene ID= ENSG00000054277.13 TPM= 3.79 Transcript Type= NA
chr1	241628855	241640298	241628855	241640298	-	transcript13965.chr1.nnic@OPN3	transcript13965.chr1.nnic	protein_coding	241639882,241628855	241640298,241635794	Gene ID= ENSG00000054277.13 TPM= 5.84 Transcript Type= NA
chr1	241593124	241640361	241593124	241640361	-	ENST00000366554.2@OPN3	ENST00000366554.2	protein_coding	241639882,241604260,241597746,241593124	241640361,241604579,241597997,241594691	Gene ID= ENSG00000054277.13 TPM= 4.67 Transcript Type= protein_coding
chr1	241593602	241640355	241593602	241640355	-	ENST00000490673.5@OPN3	ENST00000490673.5	protein_coding	241639882,241597746,241593602	241640355,241597997,241594691	Gene ID= ENSG00000054277.13 TPM= 29.48 Transcript Type= nonsense_mediated_decay
chr1	241593602	241640340	241593602	241640340	-	ENST00000469376.5@OPN3	ENST00000469376.5	protein_coding	241639882,241604420,241597746,241593602	241640340,241604579,241597997,241594691	Gene ID= ENSG00000054277.13 TPM= 2.63 Transcript Type= nonsense_mediated_decay
chr1	243124428	243255224	243124428	243255224	-	transcript13979.chr1.nic@CEP170	transcript13979.chr1.nic	protein_coding	243255040,243225176,243221724,243211886,243200777,243200518,243199060,243191018,243185779,243172697,243169628,243164284,243156221,243142316,243139937,243136143,243129360,243128249,243124428	243255224,243225321,243221813,243211964,243200835,243200680,243199194,243191494,243186422,243172846,243169754,243166116,243156455,243142463,243140107,243136231,243129453,243128300,243126738	Gene ID= ENSG00000143702.15 TPM= 5.84 Transcript Type= NA
chr1	243256041	243500091	243256041	243500091	+	transcript13976.chr1.nic@SDCCAG8	transcript13976.chr1.nic	protein_coding	243256041,243270105,243270978,243274543,243286272,243293091,243293399,243304713,243307989,243316755,243330540,243341039,243344215,243378721,243415702,243417968,243426427,243489014,243499756	243256240,243270257,243271063,243274656,243286397,243293219,243293494,243304777,243308177,243316893,243330692,243341173,243344331,243378863,243415829,243418076,243426558,243489140,243500091	Gene ID= ENSG00000054282.15 TPM= 3.7 Transcript Type= NA
chr1	243256041	243517843	243256041	243517843	+	transcript13983.chr1.nnic@SDCCAG8	transcript13983.chr1.nnic	protein_coding	243256041,243270105,243270978,243274543,243286272,243293091,243304713,243307989,243316755,243330540,243341039,243344215,243378721,243415702,243417968,243426427,243489014,243516572	243256240,243270257,243271063,243274656,243286397,243293219,243304777,243308177,243316893,243330692,243341173,243344331,243378863,243415829,243418076,243426558,243489140,243517843	Gene ID= ENSG00000054282.15 TPM= 4.67 Transcript Type= NA
chr1	243256056	243500092	243256056	243500092	+	ENST00000366541.7@SDCCAG8	ENST00000366541.7	protein_coding	243256056,243270105,243270978,243274543,243286272,243293091,243304713,243307989,243316755,243330540,243341039,243344215,243378721,243415702,243417968,243426427,243489014,243499756	243256240,243270257,243271063,243274656,243286397,243293219,243304777,243308177,243316893,243330692,243341173,243344331,243378863,243415829,243418076,243426558,243489140,243500092	Gene ID= ENSG00000054282.15 TPM= 15.38 Transcript Type= protein_coding
chr1	243256041	243500090	243256041	243500090	+	transcript13987.chr1.nnic@SDCCAG8	transcript13987.chr1.nnic	protein_coding	243256041,243270105,243270978,243274543,243286272,243293091,243304713,243307989,243316755,243330540,243341039,243344215,243378721,243415702,243417968,243426427,243499756	243256240,243270257,243271063,243274656,243286397,243293219,243304777,243308177,243316893,243330692,243341173,243344331,243378863,243415829,243418076,243426558,243500090	Gene ID= ENSG00000054282.15 TPM= 2.92 Transcript Type= NA
chr1	243256041	243500091	243256041	243500091	+	transcript13989.chr1.nic@SDCCAG8	transcript13989.chr1.nic	protein_coding	243256041,243270105,243270978,243274543,243286272,243304713,243307989,243316755,243330540,243341039,243344215,243378721,243415702,243417968,243426427,243489014,243499756	243256240,243270257,243271063,243274656,243286397,243304777,243308177,243316893,243330692,243341173,243344331,243378863,243415829,243418076,243426558,243489140,243500091	Gene ID= ENSG00000054282.15 TPM= 3.7 Transcript Type= NA
chr1	243256041	243305324	243256041	243305324	+	transcript14000.chr1.nic@SDCCAG8	transcript14000.chr1.nic	protein_coding	243256041,243270105,243270978,243274543,243286272,243293091,243293399,243304713,243305012	243256240,243270257,243271063,243274656,243286397,243293219,243293494,243304777,243305324	Gene ID= ENSG00000054282.15 TPM= 2.34 Transcript Type= NA
chr1	243256041	243306107	243256041	243306107	+	transcript14004.chr1.nic@SDCCAG8	transcript14004.chr1.nic	protein_coding	243256041,243270105,243270978,243274543,243286272,243293091,243304713,243305012	243256240,243270257,243271063,243274656,243286397,243293219,243304777,243306107	Gene ID= ENSG00000054282.15 TPM= 7.01 Transcript Type= NA
chr1	243256041	243306107	243256041	243306107	+	transcript14008.chr1.nic@SDCCAG8	transcript14008.chr1.nic	protein_coding	243256041,243270105,243270978,243274543,243286272,243304713,243305012	243256240,243270257,243271063,243274656,243286397,243304777,243306107	Gene ID= ENSG00000054282.15 TPM= 3.5 Transcript Type= NA
chr1	243501763	243850128	243501763	243850128	-	ENST00000366539.5@AKT3	ENST00000366539.5	protein_coding	243850040,243843125,243695591,243664772,243645893,243637611,243615096,243613671,243572926,243563720,243552729,243545510,243512324,243501763	243850128,243843282,243695716,243664883,243646037,243637742,243615161,243613739,243573048,243563848,243552943,243545597,243512426,243505334	Gene ID= ENSG00000117020.16 TPM= 3.5 Transcript Type= protein_coding
chr1	244408494	244452134	244408494	244452134	-	ENST00000366535.3@ADSS	ENST00000366535.3	protein_coding	244451635,244437666,244436825,244432545,244424321,244423953,244422835,244420170,244418760,244417628,244415981,244411287,244408494	244452134,244437768,244436893,244432595,244424387,244424060,244422916,244420296,244418914,244417752,244416078,244411436,244409638	Gene ID= ENSG00000035687.9 TPM= 33.86 Transcript Type= protein_coding
chr1	244653069	244709033	244653069	244709033	+	transcript14028.chr1.nnic@DESI2	transcript14028.chr1.nnic	protein_coding	244653069,244681868,244686597,244689249,244691879,244705556	244653355,244681932,244686669,244689342,244692020,244709033	Gene ID= ENSG00000121644.18 TPM= 21.02 Transcript Type= NA
chr1	244652935	244709033	244652935	244709033	+	ENST00000302550.15@DESI2	ENST00000302550.15	protein_coding	244652935,244686597,244689249,244691879,244705556	244653355,244686669,244689342,244692020,244709033	Gene ID= ENSG00000121644.18 TPM= 122.6 Transcript Type= protein_coding
chr1	244653103	244705951	244653103	244705951	+	ENST00000263831.11@DESI2	ENST00000263831.11	protein_coding	244653103,244686597,244691884,244705556	244653355,244686669,244692020,244705951	Gene ID= ENSG00000121644.18 TPM= 4.67 Transcript Type= protein_coding
chr1	244680022	244683467	244680022	244683467	-	transcript14039.chr1.nnic@NA	transcript14039.chr1.nnic	NA	244680022	244683467	Gene ID= novel_gene_chr1_14040 TPM= 2.34 Transcript Type= NA
chr1	244835659	244845057	244835659	244845057	+	ENST00000498262.1@COX20	ENST00000498262.1	protein_coding	244835659,244841944,244842199,244843041	244835756,244842058,244842258,244845057	Gene ID= ENSG00000203667.9 TPM= 36.2 Transcript Type= processed_transcript
chr1	244970351	245087794	244970351	245087794	+	ENST00000473686.5@EFCAB2	ENST00000473686.5	protein_coding	244970351,245059386,245082083,245083442,245083622,245087245	244970443,245059458,245082162,245083484,245083688,245087794	Gene ID= ENSG00000203666.12 TPM= 1.17 Transcript Type= processed_transcript
chr1	244970390	245122991	244970390	245122991	+	ENST00000487845.5@EFCAB2	ENST00000487845.5	protein_coding	244970390,245059386,245082083,245083442,245083622,245121920	244970443,245059458,245082162,245083484,245083688,245122991	Gene ID= ENSG00000203666.12 TPM= 4.67 Transcript Type= processed_transcript
chr1	245128476	245131805	245128476	245131805	+	transcript14087.chr1.nnic@NA	transcript14087.chr1.nnic	NA	245128476	245131805	Gene ID= novel_gene_chr1_14088 TPM= 2.34 Transcript Type= NA
chr1	245511002	245709431	245511002	245709431	+	ENST00000366518.4@KIF26B	ENST00000366518.4	protein_coding	245511002,245540767,245602577,245607651,245609266,245611793,245646121,245684233,245685405,245698106,245698887,245702458	245511128,245540950,245602783,245607744,245609528,245611976,245646280,245684395,245688807,245698308,245699037,245709431	Gene ID= ENSG00000162849.15 TPM= 2.34 Transcript Type= protein_coding
chr1	245749351	245929937	245749351	245929937	-	ENST00000470510.5@SMYD3	ENST00000470510.5	protein_coding	245929870,245927931,245915530,245863799,245858496,245814342,245764041,245749351	245929937,245928033,245915640,245863886,245858670,245814415,245764149,245749664	Gene ID= ENSG00000185420.18 TPM= 2.34 Transcript Type= processed_transcript
chr1	245749351	245860599	245749351	245860599	-	transcript14095.chr1.nnic@SMYD3	transcript14095.chr1.nnic	protein_coding	245860443,245858496,245764041,245749351	245860599,245858701,245764149,245749664	Gene ID= ENSG00000185420.18 TPM= 4.67 Transcript Type= NA
chr1	246317608	246322436	246317608	246322436	+	transcript14096.chr1.nnic@NA	transcript14096.chr1.nnic	NA	246317608	246322436	Gene ID= novel_gene_chr1_14097 TPM= 3.5 Transcript Type= NA
chr1	246540560	246566329	246540560	246566329	-	transcript14120.chr1.nnic@TFB2M	transcript14120.chr1.nnic	protein_coding	246565826,246564346,246556573,246551213,246548545,246544521,246540560	246566329,246564434,246556721,246551302,246548607,246544681,246541202	Gene ID= ENSG00000162851.7 TPM= 2.34 Transcript Type= NA
chr1	246566548	246668342	246566548	246668342	+	transcript14110.chr1.nic@CNST	transcript14110.chr1.nic	protein_coding	246566548,246591512,246621429,246631894,246633924,246634473,246641749,246641941,246647139,246660199,246665700	246566789,246591941,246621634,246631924,246634010,246634587,246641770,246642037,246648037,246660334,246668342	Gene ID= ENSG00000162852.13 TPM= 3.5 Transcript Type= NA
chr1	246566446	246668584	246566446	246668584	+	ENST00000366513.8@CNST	ENST00000366513.8	protein_coding	246566446,246591512,246621429,246631894,246633924,246634473,246641749,246641941,246647139,246660199,246665700	246566663,246591941,246621634,246631924,246634010,246634587,246641770,246642037,246648037,246660334,246668584	Gene ID= ENSG00000162852.13 TPM= 5.84 Transcript Type= protein_coding
chr1	246724404	246767464	246724404	246767464	+	transcript14131.chr1.nnic@SCCPDH	transcript14131.chr1.nnic	protein_coding	246724404,246726892,246735975,246740172,246744076,246758226,246759034,246759957,246760171,246764246,246766058,246767195	246724612,246727004,246736055,246740301,246744125,246758356,246759151,246760076,246760227,246764303,246766139,246767464	Gene ID= ENSG00000143653.9 TPM= 3.5 Transcript Type= NA
chr1	246724286	246767464	246724286	246767464	+	transcript14137.chr1.nnic@SCCPDH	transcript14137.chr1.nnic	protein_coding	246724286,246726892,246735975,246740172,246744076,246758226,246759034,246759957,246760171,246764246,246765141,246767195	246724612,246727004,246736055,246740301,246744125,246758356,246759151,246760076,246760227,246765008,246766139,246767464	Gene ID= ENSG00000143653.9 TPM= 2.34 Transcript Type= NA
chr1	246789094	246792385	246789094	246792385	+	ENST00000426089.1@LINC01341	ENST00000426089.1	processed_transcript	246789094,246790446	246789698,246792385	Gene ID= ENSG00000227953.6 TPM= 1.17 Transcript Type= retained_intron
chr1	246840542	246931955	246840542	246931955	-	transcript14140.chr1.nic@AHCTF1	transcript14140.chr1.nic	protein_coding	246931578,246918250,246916142,246913232,246907551,246905541,246903949,246902525,246900337,246900065,246899451,246898208,246895835,246894659,246891779,246890956,246889966,246888394,246888177,246887211,246885493,246877158,246876950,246876037,246867661,246867244,246863924,246861959,246860899,246857691,246855730,246853091,246849615,246843795,246842694,246840542	246931955,246918377,246916395,246913412,246907758,246905657,246904033,246902675,246900469,246900246,246899512,246898336,246895925,246894748,246891919,246891060,246890059,246888517,246888233,246887357,246885680,246877302,246877081,246876187,246867811,246867351,246864116,246862153,246861295,246857814,246855827,246853299,246851442,246843928,246842776,246840998	Gene ID= ENSG00000153207.14 TPM= 10.51 Transcript Type= NA
chr1	247036784	247078755	247036784	247078755	-	ENST00000366503.2@ZNF670	ENST00000366503.2	protein_coding	247078594,247039411,247038810,247036784	247078755,247039537,247038870,247038427	Gene ID= ENSG00000277462.1 TPM= 5.84 Transcript Type= protein_coding
chr1	247099962	247104368	247099962	247104368	-	ENST00000448299.6@ZNF669	ENST00000448299.6	protein_coding	247104197,247101987,247101731,247099962	247104368,247102113,247101791,247101319	Gene ID= ENSG00000188295.14 TPM= 1.17 Transcript Type= protein_coding
chr1	247110160	247112417	247110160	247112417	-	ENST00000623686.1@C1orf229	ENST00000623686.1	lincRNA	247110160	247112417	Gene ID= ENSG00000221953.5 TPM= 1.17 Transcript Type= lincRNA
chr1	247155901	247172016	247155901	247172016	-	ENST00000340684.10@ZNF124	ENST00000340684.10	protein_coding	247171848,247159687,247159006,247155901	247172016,247159813,247159066,247157217	Gene ID= ENSG00000196418.12 TPM= 2.34 Transcript Type= protein_coding
chr1	247187049	247189792	247187049	247189792	+	transcript14162.chr1.nnic@NA	transcript14162.chr1.nnic	NA	247187049	247189792	Gene ID= novel_gene_chr1_14163 TPM= 72.39 Transcript Type= NA
chr1	247189845	247210863	247189845	247210863	-	transcript14168.chr1.nnic@AL390728.4	transcript14168.chr1.nnic	transcribed_unprocessed_pseudogene	247210691,247200067,247199360,247189845	247210863,247202095,247199455,247191014	Gene ID= ENSG00000227671.4 TPM= 3.5 Transcript Type= NA
chr1	247192230	247192789	247192230	247192789	+	transcript14169.chr1.nnic@NA	transcript14169.chr1.nnic	NA	247192230	247192789	Gene ID= novel_gene_chr1_14170 TPM= 3.5 Transcript Type= NA
chr1	247208385	247210870	247208385	247210870	-	transcript14171.chr1.nnic@NA	transcript14171.chr1.nnic	NA	247208385	247210870	Gene ID= novel_gene_chr1_14172 TPM= 2.34 Transcript Type= NA
chr1	247297412	247331869	247297412	247331869	-	transcript14175.chr1.nic@ZNF496	transcript14175.chr1.nic	protein_coding	247331790,247331432,247329966,247329189,247328683,247323154,247310324,247309699,247308475,247297412	247331869,247331647,247330081,247329615,247328866,247323230,247310456,247309806,247308588,247301276	Gene ID= ENSG00000162714.12 TPM= 5.25 Transcript Type= NA
chr1	247331297	247334576	247331297	247334576	+	transcript14184.chr1.nnic@NA	transcript14184.chr1.nnic	NA	247331297	247334576	Gene ID= novel_gene_chr1_14185 TPM= 18.68 Transcript Type= NA
chr1	247549088	247577690	247549088	247577690	+	ENST00000366488.4@GCSAML	ENST00000366488.4	protein_coding	247549088,247556407,247563590,247565931,247574143	247549220,247556466,247563639,247565959,247577690	Gene ID= ENSG00000169224.12 TPM= 5.84 Transcript Type= protein_coding
chr1	248838209	248849517	248838209	248849517	+	transcript14209.chr1.nic@ZNF672	transcript14209.chr1.nic	protein_coding	248838209,248844483,248845566	248838551,248844636,248849517	Gene ID= ENSG00000171161.12 TPM= 2.34 Transcript Type= NA
chr1	248838280	248849517	248838280	248849517	+	ENST00000306562.7@ZNF672	ENST00000306562.7	protein_coding	248838280,248844483,248845566,248847052	248838551,248844636,248845662,248849517	Gene ID= ENSG00000171161.12 TPM= 102.75 Transcript Type= protein_coding
chr1	248850008	248859132	248850008	248859132	-	transcript14216.chr1.nic@ZNF692	transcript14216.chr1.nic	protein_coding	248858918,248858131,248857234,248856514,248856288,248855725,248855558,248855380,248853937,248850682,248850008	248859132,248858321,248857859,248856562,248856422,248855946,248855635,248855458,248854051,248850781,248850516	Gene ID= ENSG00000171163.15 TPM= 3.67 Transcript Type= NA
chr1	248850008	248859132	248850008	248859132	-	transcript14218.chr1.nic@ZNF692	transcript14218.chr1.nic	protein_coding	248858918,248858131,248857234,248856514,248856373,248855725,248855558,248855380,248853937,248850682,248850008	248859132,248858321,248857859,248856562,248856422,248855946,248855635,248855458,248854051,248850781,248850516	Gene ID= ENSG00000171163.15 TPM= 2.7 Transcript Type= NA
chr1	248850008	248858955	248850008	248858955	-	transcript14222.chr1.nnic@ZNF692	transcript14222.chr1.nnic	protein_coding	248858918,248857234,248856514,248856288,248855725,248855558,248855380,248853937,248850682,248850008	248858955,248858321,248856562,248856422,248855946,248855635,248855458,248854002,248850781,248850516	Gene ID= ENSG00000171163.15 TPM= 2.5 Transcript Type= NA
chr1	248850008	248859132	248850008	248859132	-	transcript14224.chr1.nic@ZNF692	transcript14224.chr1.nic	protein_coding	248858918,248857234,248856514,248856288,248855725,248855558,248855380,248853937,248850682,248850008	248859132,248858321,248856562,248856422,248855946,248855635,248855458,248854051,248850781,248850516	Gene ID= ENSG00000171163.15 TPM= 11.84 Transcript Type= NA
chr1	248850008	248859077	248850008	248859077	-	transcript14227.chr1.nic@ZNF692	transcript14227.chr1.nic	protein_coding	248858918,248858131,248857234,248856514,248856288,248855558,248855380,248853937,248850682,248850008	248859077,248858321,248857859,248856562,248856422,248855946,248855458,248854051,248850781,248850516	Gene ID= ENSG00000171163.15 TPM= 3.28 Transcript Type= NA
chr1	248850008	248859132	248850008	248859132	-	transcript14231.chr1.nic@ZNF692	transcript14231.chr1.nic	protein_coding	248858918,248857234,248856514,248856288,248855558,248855380,248853937,248850682,248850008	248859132,248858321,248856562,248856422,248855946,248855458,248854051,248850781,248850516	Gene ID= ENSG00000171163.15 TPM= 9.12 Transcript Type= NA
chr1	248850006	248859072	248850006	248859072	-	ENST00000306601.8@ZNF692	ENST00000306601.8	protein_coding	248858918,248858131,248857828,248857234,248856514,248856288,248855725,248855558,248855380,248853937,248850682,248850006	248859072,248858321,248857859,248857497,248856562,248856422,248855946,248855635,248855458,248854051,248850781,248850516	Gene ID= ENSG00000171163.15 TPM= 5.42 Transcript Type= protein_coding
chr1	248906196	248919946	248906196	248919946	+	ENST00000355360.8@PGBD2	ENST00000355360.8	protein_coding	248906196,248913816,248917279	248906342,248913879,248919946	Gene ID= ENSG00000185220.11 TPM= 1.17 Transcript Type= protein_coding
chr1	248906243	248918573	248906243	248918573	+	ENST00000329291.5@PGBD2	ENST00000329291.5	protein_coding	248906243,248913816,248916602	248906342,248913879,248918573	Gene ID= ENSG00000185220.11 TPM= 1.17 Transcript Type= protein_coding
chr2	218153	264040	218153	264040	-	transcript7.chr2.nic@SH3YL1	transcript7.chr2.nic	protein_coding	263984,253005,249731,247538,243503,242798,234160,233101,231023,229966,218153	264040,253115,249844,247602,243562,242871,234272,233229,231191,230044,219001	Gene ID= ENSG00000035115.21 TPM= 4.09 Transcript Type= NA
chr2	218136	264032	218136	264032	-	ENST00000403712.6@SH3YL1	ENST00000403712.6	protein_coding	263984,253005,249731,247538,234160,233101,231023,229966,218136	264032,253115,249844,247602,234272,233229,231191,230044,219001	Gene ID= ENSG00000035115.21 TPM= 14.59 Transcript Type= protein_coding
chr2	264869	278283	264869	278283	+	ENST00000272067.10@ACP1	ENST00000272067.10	protein_coding	264869,271866,272192,275140,276980,277227	265007,271939,272305,275201,277085,278283	Gene ID= ENSG00000143727.15 TPM= 22.18 Transcript Type= protein_coding
chr2	264872	278283	264872	278283	+	ENST00000272065.9@ACP1	ENST00000272065.9	protein_coding	264872,271866,272037,275140,276980,277227	265007,271939,272150,275201,277085,278283	Gene ID= ENSG00000143727.15 TPM= 98.08 Transcript Type= protein_coding
chr2	279561	289019	279561	289019	-	transcript37.chr2.nnic@ALKAL2	transcript37.chr2.nnic	protein_coding	288988,288553,287583,286290,286123,283111,279561	289019,288789,287892,286343,286203,283175,280149	Gene ID= ENSG00000189292.15 TPM= 7.01 Transcript Type= NA
chr2	279558	288296	279558	288296	-	ENST00000403610.8@ALKAL2	ENST00000403610.8	protein_coding	288013,287583,286290,286123,283111,279558	288296,287892,286343,286203,283175,280152	Gene ID= ENSG00000189292.15 TPM= 2.34 Transcript Type= protein_coding
chr2	667015	677419	667015	677419	-	transcript48.chr2.nic@TMEM18	transcript48.chr2.nic	protein_coding	677289,675510,672808,669757,667015	677419,676238,672862,669850,669675	Gene ID= ENSG00000151353.14 TPM= 2.34 Transcript Type= NA
chr2	667335	677439	667335	677439	-	ENST00000281017.7@TMEM18	ENST00000281017.7	protein_coding	677289,675510,672808,669757,667335	677439,675630,672862,669850,669675	Gene ID= ENSG00000151353.14 TPM= 2.34 Transcript Type= protein_coding
chr2	667973	677406	667973	677406	-	ENST00000432667.5@TMEM18	ENST00000432667.5	protein_coding	677289,675758,675510,672808,669757,667973	677406,676238,675630,672862,669850,669675	Gene ID= ENSG00000151353.14 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr2	1633185	1744627	1633185	1744627	-	transcript68.chr2.nic@PXDN	transcript68.chr2.nic	protein_coding	1744256,1693063,1691928,1684080,1683656,1680193,1676927,1673643,1666214,1664958,1663605,1662072,1660881,1654400,1653628,1648172,1644618,1643368,1639302,1638846,1635408,1633185	1744627,1693134,1691999,1684151,1683727,1680362,1677044,1673812,1666486,1665074,1663763,1662184,1661037,1654508,1653785,1649675,1644752,1643576,1639422,1638978,1635521,1634323	Gene ID= ENSG00000130508.10 TPM= 6.42 Transcript Type= NA
chr2	1631887	1744506	1631887	1744506	-	ENST00000252804.8@PXDN	ENST00000252804.8	protein_coding	1744256,1693063,1691928,1687632,1684080,1683656,1680193,1676927,1673643,1666214,1664958,1663605,1662072,1660881,1654400,1653628,1648172,1644618,1643368,1639302,1638846,1635408,1631887	1744506,1693134,1691999,1687703,1684151,1683727,1680362,1677044,1673812,1666486,1665074,1663763,1662184,1661037,1654508,1653785,1649675,1644752,1643576,1639422,1638978,1635521,1634323	Gene ID= ENSG00000130508.10 TPM= 35.61 Transcript Type= protein_coding
chr2	3188925	3377840	3188925	3377840	-	transcript72.chr2.nic@EIPR1	transcript72.chr2.nic	protein_coding	3377648,3354550,3338017,3214149,3196881,3193999,3192414,3188925	3377840,3354633,3338149,3214248,3197017,3194166,3192581,3189508	Gene ID= ENSG00000032389.12 TPM= 2.34 Transcript Type= NA
chr2	3188925	3377882	3188925	3377882	-	ENST00000382125.8@EIPR1	ENST00000382125.8	protein_coding	3377648,3354550,3338017,3257299,3214149,3196881,3193999,3192414,3188925	3377882,3354633,3338149,3257455,3214248,3197017,3194166,3192581,3189508	Gene ID= ENSG00000032389.12 TPM= 37.36 Transcript Type= protein_coding
chr2	3188925	3377830	3188925	3377830	-	ENST00000398659.8@EIPR1	ENST00000398659.8	protein_coding	3377648,3354550,3338017,3274339,3257299,3214149,3196881,3193999,3192414,3188925	3377830,3354633,3338149,3274419,3257455,3214248,3197017,3194166,3192581,3189508	Gene ID= ENSG00000032389.12 TPM= 1.17 Transcript Type= protein_coding
chr2	3379686	3479566	3379686	3479566	+	ENST00000324266.9@TRAPPC12	ENST00000324266.9	protein_coding	3379686,3387620,3401777,3421881,3424525,3443779,3457621,3460263,3465597,3477695,3478846,3479219	3379876,3388670,3401893,3421994,3424663,3443891,3457693,3460336,3465695,3477795,3478933,3479566	Gene ID= ENSG00000171853.15 TPM= 49.82 Transcript Type= protein_coding
chr2	3379675	3479567	3379675	3479567	+	ENST00000382110.6@TRAPPC12	ENST00000382110.6	protein_coding	3379675,3387620,3401777,3421881,3424525,3443779,3457621,3460263,3465597,3477695,3478846,3479219	3379839,3388670,3401893,3421994,3424663,3443891,3457693,3460336,3465695,3477795,3478933,3479567	Gene ID= ENSG00000171853.15 TPM= 13.63 Transcript Type= protein_coding
chr2	3379683	3479565	3379683	3479565	+	transcript82.chr2.nnic@TRAPPC12	transcript82.chr2.nnic	protein_coding	3379683,3387620,3401777,3424525,3443779,3457621,3460263,3465597,3477695,3478846,3479219	3379876,3388670,3401893,3424663,3443891,3457693,3460336,3465695,3477795,3478933,3479565	Gene ID= ENSG00000171853.15 TPM= 4.29 Transcript Type= NA
chr2	3497361	3519736	3497361	3519736	-	ENST00000327435.10@ADI1	ENST00000327435.10	protein_coding	3519368,3513857,3500814,3497361	3519736,3513976,3500993,3499082	Gene ID= ENSG00000182551.13 TPM= 7.01 Transcript Type= protein_coding
chr2	3498453	3519531	3498453	3519531	-	transcript93.chr2.nnic@ADI1	transcript93.chr2.nnic	protein_coding	3519368,3500814,3498453	3519531,3500993,3499082	Gene ID= ENSG00000182551.13 TPM= 5.84 Transcript Type= NA
chr2	3545115	3558616	3545115	3558616	-	ENST00000315212.3@RNASEH1	ENST00000315212.3	protein_coding	3558133,3556789,3552144,3550373,3549058,3548640,3547931,3545115	3558616,3556904,3552308,3550472,3549112,3548724,3548055,3545871	Gene ID= ENSG00000171865.9 TPM= 24.52 Transcript Type= protein_coding
chr2	3558477	3561745	3558477	3561745	+	transcript106.chr2.nnic@RNASEH1-AS1	transcript106.chr2.nnic	antisense_RNA	3558477,3559404,3561317	3558998,3559729,3561745	Gene ID= ENSG00000234171.2 TPM= 2.34 Transcript Type= NA
chr2	3558492	3561745	3558492	3561745	+	ENST00000438436.2@RNASEH1-AS1	ENST00000438436.2	antisense_RNA	3558492,3559448,3561317	3558998,3559729,3561745	Gene ID= ENSG00000234171.2 TPM= 1.17 Transcript Type= antisense_RNA
chr2	3558578	3561731	3558578	3561731	+	ENST00000426725.1@RNASEH1-AS1	ENST00000426725.1	antisense_RNA	3558578,3561317	3558998,3561731	Gene ID= ENSG00000234171.2 TPM= 1.17 Transcript Type= antisense_RNA
chr2	3575205	3580919	3575205	3580919	+	ENST00000304921.9@RPS7	ENST00000304921.9	protein_coding	3575205,3575592,3575817,3576487,3577710,3580110,3580805	3575350,3575684,3575888,3576630,3577774,3580260,3580919	Gene ID= ENSG00000171863.12 TPM= 288.4 Transcript Type= protein_coding
chr2	3594832	3644644	3594832	3644644	+	ENST00000382062.6@COLEC11	ENST00000382062.6	protein_coding	3594832,3604315,3613311,3640278,3643444,3643727	3595168,3604470,3613382,3640331,3643539,3644644	Gene ID= ENSG00000118004.17 TPM= 2.34 Transcript Type= protein_coding
chr2	3595092	3644458	3595092	3644458	+	ENST00000349077.8@COLEC11	ENST00000349077.8	protein_coding	3595092,3604315,3613311,3637533,3640278,3643444,3643727	3595168,3604470,3613382,3637604,3640331,3643539,3644458	Gene ID= ENSG00000118004.17 TPM= 1.17 Transcript Type= protein_coding
chr2	6848318	6866635	6848318	6866635	-	ENST00000478738.5@CMPK2	ENST00000478738.5	protein_coding	6866426,6863464,6861184,6851450,6848318	6866635,6863578,6861385,6851683,6849973	Gene ID= ENSG00000134326.11 TPM= 3.5 Transcript Type= processed_transcript
chr2	6848322	6865709	6848322	6865709	-	transcript129.chr2.nnic@CMPK2	transcript129.chr2.nnic	protein_coding	6865022,6863464,6861184,6851548,6848322	6865709,6863578,6861385,6851683,6849973	Gene ID= ENSG00000134326.11 TPM= 3.5 Transcript Type= NA
chr2	6848316	6865696	6848316	6865696	-	ENST00000256722.9@CMPK2	ENST00000256722.9	protein_coding	6865022,6863464,6861184,6851450,6848316	6865696,6863578,6861385,6851683,6849973	Gene ID= ENSG00000134326.11 TPM= 116.76 Transcript Type= protein_coding
chr2	6865801	6897324	6865801	6897324	+	transcript121.chr2.nic@RSAD2	transcript121.chr2.nic	protein_coding	6865801,6883371,6886935,6890176,6893671,6895778	6866045,6883532,6887164,6890325,6893703,6897324	Gene ID= ENSG00000134321.11 TPM= 2.34 Transcript Type= NA
chr2	6877665	6898239	6877665	6898239	+	ENST00000382040.3@RSAD2	ENST00000382040.3	protein_coding	6877665,6883371,6886935,6890176,6893671,6895778	6878146,6883532,6887164,6890325,6893703,6898239	Gene ID= ENSG00000134321.11 TPM= 38.53 Transcript Type= protein_coding
chr2	6917392	7044182	6917392	7044182	+	ENST00000320892.10@RNF144A	ENST00000320892.10	protein_coding	6917392,6940948,6996916,7014454,7014712,7020473,7024369,7030126,7039629	6917622,6941147,6997061,7014558,7014772,7020680,7024516,7030215,7044182	Gene ID= ENSG00000151692.14 TPM= 8.17 Transcript Type= protein_coding
chr2	7725801	7730705	7725801	7730705	+	ENST00000417930.1@LINC01871	ENST00000417930.1	lincRNA	7725801,7730516	7725853,7730705	Gene ID= ENSG00000235576.1 TPM= 2.34 Transcript Type= lincRNA
chr2	8678845	8684453	8678845	8684453	+	ENST00000234091.8@ID2	ENST00000234091.8	protein_coding	8678845,8681491,8681854,8682843,8683685	8679317,8681565,8682513,8682906,8684453	Gene ID= ENSG00000115738.9 TPM= 28.02 Transcript Type= protein_coding
chr2	8728929	8837630	8728929	8837630	-	ENST00000473731.5@KIDINS220	ENST00000473731.5	protein_coding	8837469,8826986,8818695,8817618,8813237,8812395,8806271,8802930,8800400,8798202,8796771,8793810,8791060,8789880,8788647,8786206,8785741,8779674,8778896,8778639,8776748,8770670,8751466,8750112,8747887,8736868,8734655,8733444,8728929	8837630,8827129,8818793,8817716,8813335,8812493,8806369,8803127,8800498,8798300,8796869,8793987,8791224,8790059,8788812,8786357,8786030,8779814,8779139,8778727,8776892,8770832,8751644,8750335,8748000,8736999,8734753,8733680,8731982	Gene ID= ENSG00000134313.15 TPM= 47.09 Transcript Type= protein_coding
chr2	8728929	8837614	8728929	8837614	-	transcript146.chr2.nnic@KIDINS220	transcript146.chr2.nnic	protein_coding	8837480,8826986,8818695,8817618,8813237,8812395,8806271,8802930,8800400,8798202,8796771,8793810,8791060,8789880,8788647,8786206,8785741,8779674,8778896,8778639,8776748,8770670,8751466,8750112,8747946,8728929	8837614,8827129,8818793,8817716,8813335,8812493,8806369,8803127,8800498,8798300,8796869,8793987,8791224,8790059,8788812,8786357,8786030,8779814,8779139,8778727,8776892,8770832,8751644,8750335,8748000,8729925	Gene ID= ENSG00000134313.15 TPM= 7.39 Transcript Type= NA
chr2	8731953	8837612	8731953	8837612	-	ENST00000489024.5@KIDINS220	ENST00000489024.5	protein_coding	8837480,8826986,8818695,8817618,8813237,8812395,8806271,8802930,8800400,8798202,8796771,8793810,8791060,8789880,8788647,8786206,8785741,8779674,8778896,8778639,8776748,8770670,8751466,8750112,8736868,8734655,8733444,8731953	8837612,8827129,8818793,8817716,8813335,8812496,8806369,8803127,8800498,8798300,8796869,8793987,8791224,8790059,8788812,8786357,8786030,8779814,8779139,8778727,8776892,8770832,8751644,8750335,8736999,8734753,8733680,8731982	Gene ID= ENSG00000134313.15 TPM= 6.22 Transcript Type= protein_coding
chr2	8833481	8837613	8833481	8837613	-	transcript153.chr2.nnic@NA	transcript153.chr2.nnic	NA	8833481	8837613	Gene ID= novel_gene_chr2_154 TPM= 5.84 Transcript Type= NA
chr2	8858124	9003881	8858124	9003881	-	transcript160.chr2.nic@MBOAT2	transcript160.chr2.nic	protein_coding	9003540,8958497,8943187,8908621,8888018,8882511,8877030,8873108,8868446,8864170,8862271,8860613,8858124	9003881,8958642,8943264,8908716,8888073,8882565,8877213,8873300,8868549,8864234,8862322,8860764,8858904	Gene ID= ENSG00000143797.11 TPM= 3.5 Transcript Type= NA
chr2	8856551	9003821	8856551	9003821	-	transcript163.chr2.nnic@MBOAT2	transcript163.chr2.nnic	protein_coding	9003540,8943187,8908621,8888018,8882511,8877030,8873108,8868446,8864170,8862590,8860613,8856551	9003821,8943264,8908716,8888073,8882565,8877213,8873300,8868549,8864234,8862722,8860764,8858904	Gene ID= ENSG00000143797.11 TPM= 5.84 Transcript Type= NA
chr2	8852690	9003813	8852690	9003813	-	ENST00000305997.7@MBOAT2	ENST00000305997.7	protein_coding	9003540,8958497,8943187,8908621,8888018,8882511,8877030,8873108,8868446,8864170,8862590,8860613,8852690	9003813,8958642,8943264,8908716,8888073,8882565,8877213,8873300,8868549,8864234,8862722,8860764,8858904	Gene ID= ENSG00000143797.11 TPM= 9.34 Transcript Type= protein_coding
chr2	9206765	9405683	9206765	9405683	+	ENST00000315273.4@ASAP2	ENST00000315273.4	protein_coding	9206765,9279317,9297300,9318524,9320288,9323121,9327826,9334738,9335093,9344532,9344731,9350808,9356047,9356179,9358756,9368425,9374755,9376908,9378944,9380741,9385245,9388294,9393482,9400023,9400742,9401274,9403253	9207230,9279389,9297445,9318598,9320337,9323250,9327911,9334813,9335179,9344635,9344800,9350895,9356095,9356345,9358889,9368519,9374944,9376993,9379059,9380808,9385358,9388546,9393647,9400072,9400830,9401396,9405683	Gene ID= ENSG00000151693.10 TPM= 15.76 Transcript Type= protein_coding
chr2	9206765	9405678	9206765	9405678	+	ENST00000281419.7@ASAP2	ENST00000281419.7	protein_coding	9206765,9279317,9297300,9318524,9320288,9323121,9327826,9334738,9335093,9344532,9344731,9350808,9356047,9356179,9358756,9368425,9374755,9376908,9378944,9380741,9385245,9388294,9391062,9393482,9400023,9400742,9401274,9403253	9207230,9279389,9297445,9318598,9320337,9323250,9327911,9334813,9335179,9344635,9344800,9350895,9356095,9356345,9358889,9368519,9374944,9376993,9379059,9380808,9385358,9388546,9391196,9393647,9400072,9400830,9401396,9405678	Gene ID= ENSG00000151693.10 TPM= 28.61 Transcript Type= protein_coding
chr2	9217914	9219836	9217914	9219836	-	transcript246.chr2.nnic@NA	transcript246.chr2.nnic	NA	9217914	9219836	Gene ID= novel_gene_chr2_247 TPM= 4.67 Transcript Type= NA
chr2	9334203	9334460	9334203	9334460	-	transcript248.chr2.nnic@NA	transcript248.chr2.nnic	NA	9334203	9334460	Gene ID= novel_gene_chr2_249 TPM= 2.34 Transcript Type= NA
chr2	9405681	9423230	9405681	9423230	-	transcript204.chr2.nnic@ITGB1BP1	transcript204.chr2.nnic	protein_coding	9422479,9418626,9414178,9412269,9408113,9407449,9406009,9405681	9423230,9418732,9414256,9412405,9408205,9407598,9406905,9405909	Gene ID= ENSG00000119185.12 TPM= 2.34 Transcript Type= NA
chr2	9405681	9423491	9405681	9423491	-	transcript205.chr2.nnic@ITGB1BP1	transcript205.chr2.nnic	protein_coding	9423373,9418626,9414178,9412269,9408113,9407449,9406009,9405681	9423491,9418732,9414256,9412405,9408205,9407598,9406905,9405909	Gene ID= ENSG00000119185.12 TPM= 2.34 Transcript Type= NA
chr2	9405684	9423230	9405684	9423230	-	transcript213.chr2.nic@ITGB1BP1	transcript213.chr2.nic	protein_coding	9422479,9418626,9414178,9412269,9408113,9407449,9405684	9423230,9418732,9414256,9412405,9408205,9407598,9406905	Gene ID= ENSG00000119185.12 TPM= 14.01 Transcript Type= NA
chr2	9405681	9423536	9405681	9423536	-	transcript226.chr2.nnic@ITGB1BP1	transcript226.chr2.nnic	protein_coding	9423373,9412269,9408113,9407449,9406009,9405681	9423536,9412405,9408205,9407598,9406905,9405909	Gene ID= ENSG00000119185.12 TPM= 2.34 Transcript Type= NA
chr2	9405684	9423529	9405684	9423529	-	transcript227.chr2.nic@ITGB1BP1	transcript227.chr2.nic	protein_coding	9423373,9414178,9412269,9408113,9407449,9405684	9423529,9414256,9412405,9408205,9407598,9406905	Gene ID= ENSG00000119185.12 TPM= 2.34 Transcript Type= NA
chr2	9406661	9423250	9406661	9423250	-	ENST00000359712.7@ITGB1BP1	ENST00000359712.7	protein_coding	9422479,9418626,9414178,9412269,9408113,9406661	9423250,9418732,9414256,9412405,9408205,9407598	Gene ID= ENSG00000119185.12 TPM= 1.17 Transcript Type= protein_coding
chr2	9405684	9423547	9405684	9423547	-	ENST00000355346.8@ITGB1BP1	ENST00000355346.8	protein_coding	9423373,9418626,9414178,9412269,9408113,9407449,9405684	9423547,9418732,9414256,9412405,9408205,9407598,9406905	Gene ID= ENSG00000119185.12 TPM= 14.01 Transcript Type= protein_coding
chr2	9406660	9423500	9406660	9423500	-	ENST00000464228.5@ITGB1BP1	ENST00000464228.5	protein_coding	9423373,9418626,9412269,9408113,9407449,9406660	9423500,9418732,9412405,9408205,9407598,9406905	Gene ID= ENSG00000119185.12 TPM= 2.92 Transcript Type= nonsense_mediated_decay
chr2	9406659	9410106	9406659	9410106	-	transcript250.chr2.nnic@NA	transcript250.chr2.nnic	NA	9406659	9410106	Gene ID= novel_gene_chr2_251 TPM= 2.34 Transcript Type= NA
chr2	9423666	9473098	9423666	9473098	+	transcript189.chr2.nic@CPSF3	transcript189.chr2.nic	protein_coding	9423666,9428765,9429923,9430752,9432511,9433871,9436211,9440491,9443515,9448198,9452913,9455659,9456933,9459531,9467707,9471343,9472916	9423823,9428828,9430020,9430880,9432688,9433960,9436361,9441976,9443661,9448350,9453021,9455757,9457027,9459618,9467776,9471439,9473098	Gene ID= ENSG00000119203.13 TPM= 3.5 Transcript Type= NA
chr2	9423568	9473101	9423568	9473101	+	ENST00000238112.7@CPSF3	ENST00000238112.7	protein_coding	9423568,9428765,9429923,9430752,9432511,9433871,9436211,9440491,9441818,9443515,9448198,9452913,9455659,9456933,9459531,9467707,9471343,9472916	9423823,9428828,9430020,9430880,9432688,9433960,9436361,9440666,9441976,9443661,9448350,9453021,9455757,9457027,9459618,9467776,9471439,9473101	Gene ID= ENSG00000119203.13 TPM= 47.87 Transcript Type= protein_coding
chr2	9474530	9488811	9474530	9488811	+	ENST00000497473.5@IAH1	ENST00000497473.5	protein_coding	9474530,9475987,9478222,9481286,9484432,9488147	9474647,9476039,9478370,9481447,9484550,9488811	Gene ID= ENSG00000134330.18 TPM= 11.68 Transcript Type= protein_coding
chr2	9474537	9489742	9474537	9489742	+	ENST00000470914.5@IAH1	ENST00000470914.5	protein_coding	9474537,9478222,9481286,9484432,9488147	9474647,9478370,9481447,9484550,9489742	Gene ID= ENSG00000134330.18 TPM= 1.17 Transcript Type= protein_coding
chr2	9481284	9488622	9481284	9488622	+	ENST00000484826.1@IAH1	ENST00000484826.1	protein_coding	9481284,9484432,9488147	9481447,9484550,9488622	Gene ID= ENSG00000134330.18 TPM= 1.17 Transcript Type= retained_intron
chr2	9488486	9555788	9488486	9555788	-	ENST00000310823.7@ADAM17	ENST00000310823.7	protein_coding	9555509,9543153,9536698,9535834,9527786,9526111,9523249,9521203,9518103,9517901,9509979,9505166,9502173,9497114,9494637,9493747,9492898,9491101,9488486	9555788,9543285,9536828,9535922,9527954,9526244,9523338,9521316,9518247,9517989,9510131,9505365,9502276,9497248,9494767,9493825,9492986,9491151,9490518	Gene ID= ENSG00000151694.12 TPM= 8.17 Transcript Type= protein_coding
chr2	9583972	9631014	9583972	9631014	-	ENST00000238081.7@YWHAQ	ENST00000238081.7	protein_coding	9630941,9630159,9591392,9588165,9587414,9583972	9631014,9630534,9591515,9588328,9587509,9585345	Gene ID= ENSG00000134308.13 TPM= 141.66 Transcript Type= protein_coding
chr2	9583972	9630616	9583972	9630616	-	ENST00000381844.8@YWHAQ	ENST00000381844.8	protein_coding	9630159,9591392,9588165,9587414,9583972	9630616,9591515,9588328,9587509,9585345	Gene ID= ENSG00000134308.13 TPM= 19.07 Transcript Type= protein_coding
chr2	9843354	9934416	9843354	9934416	+	ENST00000263663.9@TAF1B	ENST00000263663.9	protein_coding	9843354,9845220,9849373,9851541,9854326,9868276,9875865,9882706,9904859,9910736,9911511,9913159,9919041,9919598,9933783	9843559,9845318,9849460,9851638,9854421,9868429,9876018,9882805,9905006,9910913,9911557,9913249,9919111,9919820,9934416	Gene ID= ENSG00000115750.16 TPM= 10.51 Transcript Type= protein_coding
chr2	9951698	10002277	9951698	10002277	+	ENST00000324907.13@GRHL1	ENST00000324907.13	protein_coding	9951698,9954915,9958786,9961046,9962455,9963886,9964235,9965287,9986124,9990696,9992007,9993207,9995879,9996316,9998965,10000593	9951853,9955101,9958856,9961436,9962531,9964042,9964346,9965381,9986282,9990747,9992146,9993244,9995970,9996401,9999029,10002277	Gene ID= ENSG00000134317.17 TPM= 8.17 Transcript Type= protein_coding
chr2	10039092	10040663	10039092	10040663	-	ENST00000567540.1@AC104794.2	ENST00000567540.1	lincRNA	10039092	10040663	Gene ID= ENSG00000260077.1 TPM= 7.01 Transcript Type= lincRNA
chr2	10044245	10054836	10044245	10054836	+	ENST00000535335.1@KLF11	ENST00000535335.1	protein_coding	10044245,10046150,10047650,10052227	10044451,10046419,10048595,10054836	Gene ID= ENSG00000172059.10 TPM= 36.78 Transcript Type= protein_coding
chr2	10043555	10054836	10043555	10054836	+	ENST00000305883.5@KLF11	ENST00000305883.5	protein_coding	10043555,10046150,10047650,10052227	10043758,10046419,10048595,10054836	Gene ID= ENSG00000172059.10 TPM= 109.17 Transcript Type= protein_coding
chr2	10056780	10080411	10056780	10080411	-	ENST00000381813.4@CYS1	ENST00000381813.4	protein_coding	10079906,10065904,10056780	10080411,10065956,10058958	Gene ID= ENSG00000205795.4 TPM= 22.18 Transcript Type= protein_coding
chr2	10302835	10427609	10302835	10427609	+	transcript313.chr2.nic@HPCAL1	transcript313.chr2.nic	protein_coding	10302835,10396835,10408562,10419734,10422983,10426724	10303177,10396920,10408734,10420135,10423088,10427609	Gene ID= ENSG00000115756.12 TPM= 184.13 Transcript Type= NA
chr2	10302907	10427609	10302907	10427609	+	ENST00000307845.7@HPCAL1	ENST00000307845.7	protein_coding	10302907,10396835,10419734,10422983,10426724	10303177,10396920,10420135,10423088,10427609	Gene ID= ENSG00000115756.12 TPM= 603.53 Transcript Type= protein_coding
chr2	10324990	10328805	10324990	10328805	-	transcript347.chr2.nnic@NA	transcript347.chr2.nnic	NA	10324990	10328805	Gene ID= novel_gene_chr2_348 TPM= 7.01 Transcript Type= NA
chr2	10364588	10373690	10364588	10373690	-	transcript345.chr2.nnic@NA	transcript345.chr2.nnic	NA	10364588	10373690	Gene ID= novel_gene_chr2_346 TPM= 8.17 Transcript Type= NA
chr2	10440388	10448567	10440388	10448567	-	transcript349.chr2.nic@ODC1	transcript349.chr2.nic	protein_coding	10448121,10445155,10444931,10444474,10444095,10443702,10443490,10443230,10442012,10441817,10441509,10440388	10448567,10445264,10445049,10444547,10444267,10443836,10443571,10443313,10442174,10441929,10441723,10440868	Gene ID= ENSG00000115758.12 TPM= 12.75 Transcript Type= NA
chr2	10570768	10689987	10570768	10689987	-	ENST00000538384.5@NOL10	ENST00000538384.5	protein_coding	10689796,10684567,10681971,10673520,10671554,10668658,10667218,10662959,10659172,10657742,10654481,10644320,10607185,10603078,10602776,10600853,10589578,10589043,10577636,10570768	10689987,10684612,10682069,10673557,10671690,10668723,10667278,10663044,10659250,10657891,10654547,10644372,10607311,10603157,10602874,10600942,10589751,10589290,10577738,10572190	Gene ID= ENSG00000115761.15 TPM= 1.17 Transcript Type= protein_coding
chr2	10571655	10689967	10571655	10689967	-	ENST00000381685.9@NOL10	ENST00000381685.9	protein_coding	10689796,10684567,10681971,10675794,10673520,10671554,10668658,10667218,10662959,10659172,10657742,10654481,10644320,10607185,10603078,10602776,10600853,10589578,10589043,10577636,10571655	10689967,10684612,10682069,10675871,10673557,10671690,10668723,10667278,10663044,10659250,10657891,10654547,10644372,10607311,10603157,10602874,10600942,10589751,10589290,10577738,10572190	Gene ID= ENSG00000115761.15 TPM= 18.68 Transcript Type= protein_coding
chr2	10783393	10812839	10783393	10812839	-	ENST00000540494.5@PDIA6	ENST00000540494.5	protein_coding	10812678,10810243,10802499,10797700,10797081,10793096,10791795,10790719,10789749,10788897,10788697,10787281,10784934,10783393	10812839,10810420,10802640,10797757,10797207,10793202,10791925,10790833,10789889,10788981,10788769,10787439,10785030,10784326	Gene ID= ENSG00000143870.12 TPM= 5.06 Transcript Type= protein_coding
chr2	10783391	10812844	10783391	10812844	-	ENST00000272227.7@PDIA6	ENST00000272227.7	protein_coding	10812678,10802499,10797700,10797081,10793096,10791795,10790719,10789749,10788897,10788697,10787281,10784934,10783391	10812844,10802640,10797757,10797207,10793202,10791925,10790833,10789889,10788981,10788769,10787439,10785030,10784326	Gene ID= ENSG00000143870.12 TPM= 423.35 Transcript Type= protein_coding
chr2	11155393	11178874	11155393	11178874	+	transcript402.chr2.nic@PQLC3	transcript402.chr2.nic	protein_coding	11155393,11160466,11160625,11164204,11171925,11172751,11177737	11155689,11160548,11160694,11164261,11172045,11175009,11178874	Gene ID= ENSG00000162976.12 TPM= 4.67 Transcript Type= NA
chr2	11155372	11178874	11155372	11178874	+	ENST00000295083.7@PQLC3	ENST00000295083.7	protein_coding	11155372,11160466,11160625,11164204,11171925,11174968,11177737	11155689,11160548,11160694,11164261,11172045,11175009,11178874	Gene ID= ENSG00000162976.12 TPM= 56.04 Transcript Type= protein_coding
chr2	11155372	11178870	11155372	11178870	+	ENST00000441908.6@PQLC3	ENST00000441908.6	protein_coding	11155372,11160466,11160625,11164204,11171925,11177737	11155689,11160548,11160694,11164261,11172045,11178870	Gene ID= ENSG00000162976.12 TPM= 7.01 Transcript Type= protein_coding
chr2	11164347	11167269	11164347	11167269	-	transcript412.chr2.nnic@NA	transcript412.chr2.nnic	NA	11164347	11167269	Gene ID= novel_gene_chr2_413 TPM= 3.5 Transcript Type= NA
chr2	11214358	11344659	11214358	11344659	-	transcript425.chr2.nic@ROCK2	transcript425.chr2.nic	protein_coding	11343996,11287655,11286539,11249661,11235702,11227254,11224322,11222083,11221198,11218966,11218455,11217090,11216158,11215510,11215321,11214840,11214358	11344659,11287736,11286639,11249798,11235962,11227398,11224460,11222174,11221357,11219026,11218466,11217169,11216206,11215645,11215412,11215086,11214463	Gene ID= ENSG00000134318.13 TPM= 5.06 Transcript Type= NA
chr2	11179761	11344585	11179761	11344585	-	ENST00000315872.10@ROCK2	ENST00000315872.10	protein_coding	11343996,11287655,11286539,11249661,11235702,11227254,11224322,11222083,11221198,11218966,11218455,11217090,11216158,11215510,11215321,11214840,11214357,11211681,11208287,11207726,11202052,11201310,11200957,11198681,11198491,11197526,11197180,11194955,11194256,11193779,11192451,11192148,11179761	11344585,11287736,11286639,11249798,11235962,11227398,11224460,11222174,11221357,11219026,11218466,11217169,11216206,11215645,11215412,11215086,11214463,11211840,11208447,11207910,11202121,11201413,11201143,11198774,11198585,11197705,11197348,11195025,11194344,11193857,11192712,11192361,11183440	Gene ID= ENSG00000134318.13 TPM= 19.07 Transcript Type= protein_coding
chr2	11746596	11827405	11746596	11827405	+	transcript439.chr2.nic@LPIN1	transcript439.chr2.nic	protein_coding	11746596,11765533,11767763,11771372,11773620,11776086,11779519,11782201,11783829,11784886,11787074,11788387,11791914,11795408,11802907,11804423,11805070,11815088,11819484,11820411,11824632	11746671,11765733,11767858,11771679,11773745,11776193,11779645,11782507,11783922,11785076,11787167,11788456,11792006,11795487,11803033,11804571,11805156,11815240,11819598,11820514,11827405	Gene ID= ENSG00000134324.11 TPM= 6.42 Transcript Type= NA
chr2	11746588	11827409	11746588	11827409	+	ENST00000256720.6@LPIN1	ENST00000256720.6	protein_coding	11746588,11765533,11767763,11771372,11773620,11779519,11782201,11783829,11784886,11787074,11788387,11791914,11795408,11802907,11804423,11805070,11815088,11819484,11820411,11824632	11746671,11765733,11767858,11771679,11773745,11779645,11782507,11783922,11785076,11787167,11788456,11792006,11795487,11803033,11804571,11805156,11815240,11819598,11820514,11827409	Gene ID= ENSG00000134324.11 TPM= 9.34 Transcript Type= protein_coding
chr2	11746596	11784313	11746596	11784313	+	transcript447.chr2.nic@LPIN1	transcript447.chr2.nic	protein_coding	11746596,11765533,11767763,11771372,11773620,11776086,11779519,11782201,11783829	11746671,11765733,11767858,11771679,11773745,11776193,11779645,11782507,11784313	Gene ID= ENSG00000134324.11 TPM= 2.34 Transcript Type= NA
chr2	11746596	11784313	11746596	11784313	+	transcript448.chr2.nic@LPIN1	transcript448.chr2.nic	protein_coding	11746596,11765533,11767763,11771372,11773620,11779519,11782201,11783829	11746671,11765733,11767858,11771679,11773745,11779645,11782507,11784313	Gene ID= ENSG00000134324.11 TPM= 3.5 Transcript Type= NA
chr2	12716938	12742734	12716938	12742734	+	transcript452.chr2.nic@TRIB2	transcript452.chr2.nic	protein_coding	12716938,12717252,12723260,12740326	12717010,12718577,12723552,12742734	Gene ID= ENSG00000071575.11 TPM= 4.29 Transcript Type= NA
chr2	12716936	12742734	12716936	12742734	+	transcript457.chr2.nnic@TRIB2	transcript457.chr2.nnic	protein_coding	12716936,12740326	12718577,12742734	Gene ID= ENSG00000071575.11 TPM= 5.84 Transcript Type= NA
chr2	12716889	12742734	12716889	12742734	+	ENST00000155926.8@TRIB2	ENST00000155926.8	protein_coding	12716889,12723260,12740326	12718577,12723552,12742734	Gene ID= ENSG00000071575.11 TPM= 84.85 Transcript Type= protein_coding
chr2	12716935	12742734	12716935	12742734	+	ENST00000381465.2@TRIB2	ENST00000381465.2	protein_coding	12716935,12723260,12740326	12717010,12723552,12742734	Gene ID= ENSG00000071575.11 TPM= 3.12 Transcript Type= protein_coding
chr2	14632700	14637227	14632700	14637227	+	ENST00000331243.4@FAM84A	ENST00000331243.4	protein_coding	14632700,14633586,14633944	14632937,14633828,14637227	Gene ID= ENSG00000162981.13 TPM= 7.01 Transcript Type= protein_coding
chr2	15166909	15561330	15166909	15561330	-	ENST00000281513.9@NBAS	ENST00000281513.9	protein_coding	15561188,15558580,15556783,15554061,15553426,15551493,15539223,15536418,15534543,15511212,15504145,15488894,15478226,15475687,15474067,15473222,15468382,15467664,15467329,15461687,15461201,15427711,15424315,15417527,15415546,15402168,15396413,15394227,15383215,15379602,15374608,15366580,15356303,15353553,15351992,15330598,15328199,15327750,15309171,15308216,15292537,15287073,15276851,15275484,15238468,15234545,15232422,15218773,15190264,15186742,15178988,15166909	15561330,15558634,15556819,15554138,15553473,15551536,15539356,15536551,15534641,15511350,15504213,15489022,15478289,15475880,15474324,15473347,15468533,15467804,15467407,15461791,15461337,15427794,15424468,15417712,15415719,15402301,15396475,15394349,15383317,15379831,15374720,15366693,15356416,15353710,15352081,15330765,15328312,15327870,15309247,15308353,15292766,15287183,15277101,15275818,15238686,15234747,15232511,15218968,15190403,15186880,15179116,15167323	Gene ID= ENSG00000151779.12 TPM= 16.35 Transcript Type= protein_coding
chr2	15591882	15631100	15591882	15631100	+	transcript464.chr2.nnic@DDX1	transcript464.chr2.nnic	protein_coding	15591882,15595145,15595490,15596734,15597375,15599669,15602548,15603192,15603814,15604437,15605950,15606150,15607175,15613224,15617244,15618181,15620208,15621065,15623436,15627054,15629602,15629990,15630776	15591949,15595196,15595553,15596763,15597471,15599716,15602631,15603275,15603890,15604509,15606026,15606264,15607313,15613284,15617342,15618270,15620396,15621116,15623582,15627145,15629697,15630110,15631100	Gene ID= ENSG00000079785.14 TPM= 3.5 Transcript Type= NA
chr2	15940564	15947007	15940564	15947007	+	ENST00000281043.3@MYCN	ENST00000281043.3	protein_coding	15940564,15941948,15945493	15940743,15942854,15947007	Gene ID= ENSG00000134323.11 TPM= 1.17 Transcript Type= protein_coding
chr2	16549459	16665834	16549459	16665834	-	ENST00000381323.7@FAM49A	ENST00000381323.7	protein_coding	16665780,16623864,16588050,16565646,16563989,16562005,16561456,16561161,16560990,16559460,16555069,16549459	16665834,16624019,16588129,16565767,16564094,16562141,16561533,16561277,16561069,16559586,16555139,16552999	Gene ID= ENSG00000197872.11 TPM= 14.01 Transcript Type= protein_coding
chr2	17663812	17753830	17663812	17753830	-	ENST00000351948.8@SMC6	ENST00000351948.8	protein_coding	17753626,17745827,17741612,17738221,17731741,17731078,17726389,17725257,17721142,17720940,17718077,17717088,17716741,17716086,17714861,17708639,17707219,17703157,17701829,17700208,17696289,17695152,17683638,17678859,17670423,17666420,17663812	17753830,17745951,17741729,17738326,17731877,17731139,17726469,17725358,17721261,17721038,17718223,17717176,17716905,17716264,17715065,17708753,17707379,17703292,17701909,17700378,17696426,17695297,17683763,17678964,17670575,17666517,17665613	Gene ID= ENSG00000163029.15 TPM= 3.5 Transcript Type= protein_coding
chr2	17754147	17785365	17754147	17785365	+	ENST00000381254.6@GEN1	ENST00000381254.6	protein_coding	17754147,17759929,17761396,17764897,17766579,17768738,17771196,17772634,17773096,17773219,17774271,17778002,17779978,17780621	17754345,17760104,17761582,17765073,17766689,17768811,17771287,17772784,17773132,17773299,17774401,17778063,17780121,17785365	Gene ID= ENSG00000178295.14 TPM= 1.17 Transcript Type= protein_coding
chr2	17878652	17932958	17878652	17932958	+	transcript501.chr2.nnic@KCNS3	transcript501.chr2.nnic	protein_coding	17878652,17917680,17929287,17930950	17878806,17917871,17929657,17932958	Gene ID= ENSG00000170745.11 TPM= 3.79 Transcript Type= NA
chr2	17877847	17932954	17877847	17932954	+	ENST00000403915.5@KCNS3	ENST00000403915.5	protein_coding	17877847,17917680,17930950	17878046,17917871,17932954	Gene ID= ENSG00000170745.11 TPM= 4.38 Transcript Type= protein_coding
chr2	17878646	17932953	17878646	17932953	+	transcript510.chr2.nnic@KCNS3	transcript510.chr2.nnic	protein_coding	17878646,17930950	17878806,17932953	Gene ID= ENSG00000170745.11 TPM= 3.79 Transcript Type= NA
chr2	17878678	17932961	17878678	17932961	+	ENST00000304101.8@KCNS3	ENST00000304101.8	protein_coding	17878678,17917680,17930950	17878806,17917871,17932961	Gene ID= ENSG00000170745.11 TPM= 98.95 Transcript Type= protein_coding
chr2	18554723	18560680	18554723	18560680	-	ENST00000381249.3@RDH14	ENST00000381249.3	protein_coding	18560180,18554723	18560680,18555808	Gene ID= ENSG00000240857.1 TPM= 47.87 Transcript Type= protein_coding
chr2	18554725	18560653	18554725	18560653	-	transcript518.chr2.nnic@NA	transcript518.chr2.nnic	NA	18554725	18560653	Gene ID= novel_gene_chr2_519 TPM= 2.34 Transcript Type= NA
chr2	19351485	19358653	19351485	19358653	-	ENST00000272223.2@OSR1	ENST00000272223.2	protein_coding	19358341,19353141,19351485	19358653,19353837,19352410	Gene ID= ENSG00000143867.6 TPM= 21.02 Transcript Type= protein_coding
chr2	19896753	19901947	19896753	19901947	-	transcript527.chr2.nic@TTC32	transcript527.chr2.nic	protein_coding	19901030,19897869,19896753	19901947,19898035,19897126	Gene ID= ENSG00000183891.5 TPM= 2.34 Transcript Type= NA
chr2	19896758	19901672	19896758	19901672	-	transcript531.chr2.nnic@NA	transcript531.chr2.nnic	NA	19896758	19901672	Gene ID= novel_gene_chr2_532 TPM= 3.5 Transcript Type= NA
chr2	19993120	20012669	19993120	20012669	-	transcript537.chr2.nic@MATN3	transcript537.chr2.nic	protein_coding	20012409,20005744,20003161,20001955,20000441,19997134,19993120	20012669,20006310,20003286,20002080,20000566,19997259,19994409	Gene ID= ENSG00000132031.12 TPM= 2.34 Transcript Type= NA
chr2	19992111	20012694	19992111	20012694	-	ENST00000407540.7@MATN3	ENST00000407540.7	protein_coding	20012409,20005744,20003161,20001955,20000441,19997134,19994299,19992111	20012694,20006310,20003286,20002080,20000566,19997259,19994409,19993166	Gene ID= ENSG00000132031.12 TPM= 59.55 Transcript Type= protein_coding
chr2	20032650	20051622	20032650	20051622	-	transcript541.chr2.nnic@LAPTM4A	transcript541.chr2.nnic	protein_coding	20051410,20040921,20037538,20037316,20034967,20034317,20032650	20051622,20041011,20037614,20037438,20035062,20034415,20033279	Gene ID= ENSG00000068697.6 TPM= 22.18 Transcript Type= NA
chr2	20200797	20225112	20200797	20225112	-	ENST00000254351.8@SDC1	ENST00000254351.8	protein_coding	20224802,20205343,20203813,20203087,20200797	20225112,20205424,20204291,20203222,20202935	Gene ID= ENSG00000115884.10 TPM= 193.82 Transcript Type= protein_coding
chr2	20200799	20225433	20200799	20225433	-	ENST00000381150.5@SDC1	ENST00000381150.5	protein_coding	20225262,20224802,20205343,20203813,20203087,20200799	20225433,20225086,20205424,20204291,20203222,20202935	Gene ID= ENSG00000115884.10 TPM= 108.59 Transcript Type= protein_coding
chr2	20251310	20350702	20251310	20350702	-	ENST00000403432.5@PUM2	ENST00000403432.5	protein_coding	20350597,20327310,20318537,20312236,20311494,20308314,20307978,20297553,20294376,20290652,20283343,20282947,20278583,20263193,20260337,20258243,20256033,20255216,20254863,20253822,20251310	20350702,20327378,20318645,20312423,20311663,20308584,20308071,20297678,20294518,20290790,20283486,20283231,20278819,20263460,20260466,20258371,20256170,20255341,20254984,20254014,20251716	Gene ID= ENSG00000055917.15 TPM= 3.5 Transcript Type= protein_coding
chr2	20268243	20274972	20268243	20274972	+	transcript570.chr2.nnic@NA	transcript570.chr2.nnic	NA	20268243	20274972	Gene ID= novel_gene_chr2_571 TPM= 23.35 Transcript Type= NA
chr2	20447074	20449445	20447074	20449445	+	ENST00000272233.5@RHOB	ENST00000272233.5	protein_coding	20447074	20449445	Gene ID= ENSG00000143878.9 TPM= 152.95 Transcript Type= protein_coding
chr2	20617822	20651089	20617822	20651089	-	ENST00000304031.7@HS1BP3	ENST00000304031.7	protein_coding	20651032,20645340,20640973,20638436,20624732,20623896,20617822	20651089,20645505,20641180,20638652,20624892,20624031,20619245	Gene ID= ENSG00000118960.12 TPM= 21.02 Transcript Type= protein_coding
chr2	20640025	20651084	20640025	20651084	-	ENST00000406618.3@HS1BP3	ENST00000406618.3	protein_coding	20651032,20645340,20640025	20651084,20645505,20641180	Gene ID= ENSG00000118960.12 TPM= 1.17 Transcript Type= protein_coding
chr2	20666664	20679245	20666664	20679245	+	ENST00000272224.4@GDF7	ENST00000272224.4	protein_coding	20666664,20670464	20667630,20679245	Gene ID= ENSG00000143869.6 TPM= 3.5 Transcript Type= protein_coding
chr2	20684014	20823130	20684014	20823130	-	ENST00000541941.5@LDAH	ENST00000541941.5	protein_coding	20823037,20790255,20774810,20739971,20701570,20684014	20823130,20790398,20774979,20740205,20701652,20687094	Gene ID= ENSG00000118961.14 TPM= 1.17 Transcript Type= protein_coding
chr2	20684014	20823130	20684014	20823130	-	ENST00000440866.6@LDAH	ENST00000440866.6	protein_coding	20823037,20801310,20790255,20774810,20701570,20684014	20823130,20801465,20790398,20774979,20701652,20687094	Gene ID= ENSG00000118961.14 TPM= 1.17 Transcript Type= protein_coding
chr2	20684014	20823130	20684014	20823130	-	ENST00000435420.6@LDAH	ENST00000435420.6	protein_coding	20823037,20801292,20774810,20739971,20701570,20684014	20823130,20801465,20774979,20740205,20701652,20687094	Gene ID= ENSG00000118961.14 TPM= 1.17 Transcript Type= protein_coding
chr2	20685054	20823114	20685054	20823114	-	ENST00000237822.7@LDAH	ENST00000237822.7	protein_coding	20823037,20801310,20790255,20774810,20739971,20701570,20685054	20823114,20801465,20790398,20774979,20740205,20701652,20687094	Gene ID= ENSG00000118961.14 TPM= 17.51 Transcript Type= protein_coding
chr2	23385201	23708606	23385201	23708606	+	transcript606.chr2.nnic@KLHL29	transcript606.chr2.nnic	protein_coding	23385201,23562152,23639139,23642338,23684399,23691674,23693269,23695623,23695951,23696333,23703186,23703719,23706481	23385780,23562481,23639280,23642850,23684537,23691876,23693528,23695821,23696133,23696513,23703379,23703863,23708606	Gene ID= ENSG00000119771.14 TPM= 5.84 Transcript Type= NA
chr2	23688785	23708611	23688785	23708611	+	ENST00000471654.1@KLHL29	ENST00000471654.1	protein_coding	23688785,23693269,23695623,23695951,23696333,23703186,23703719,23706481	23691876,23693528,23695821,23696133,23696513,23703379,23703863,23708611	Gene ID= ENSG00000119771.14 TPM= 8.17 Transcript Type= retained_intron
chr2	23385200	23644285	23385200	23644285	+	transcript611.chr2.nic@KLHL29	transcript611.chr2.nic	protein_coding	23385200,23475560,23562152,23639139,23642338	23385780,23475667,23562481,23639280,23644285	Gene ID= ENSG00000119771.14 TPM= 8.17 Transcript Type= NA
chr2	23385217	23708606	23385217	23708606	+	ENST00000486442.5@KLHL29	ENST00000486442.5	protein_coding	23385217,23475560,23562152,23639139,23642338,23684399,23691674,23693269,23695623,23695951,23696333,23703186,23703719,23706481	23385780,23475667,23562481,23639280,23642850,23684537,23691876,23693528,23695821,23696133,23696513,23703379,23703863,23708606	Gene ID= ENSG00000119771.14 TPM= 22.18 Transcript Type= protein_coding
chr2	23388991	23391678	23388991	23391678	-	transcript612.chr2.nnic@NA	transcript612.chr2.nnic	NA	23388991	23391678	Gene ID= novel_gene_chr2_613 TPM= 4.67 Transcript Type= NA
chr2	23748664	23927205	23748664	23927205	-	transcript614.chr2.nnic@ATAD2B	transcript614.chr2.nnic	protein_coding	23926555,23895819,23888350,23887832,23885727,23884765,23880639,23875829,23869663,23867835,23864809,23863381,23857415,23833919,23828849,23827798,23823258,23819747,23810316,23798138,23788512,23786027,23782869,23765506,23762209,23754647,23754179,23748664	23927205,23895970,23888399,23887985,23885829,23884873,23880755,23875904,23869761,23867946,23864924,23863555,23857503,23834078,23828939,23827860,23823569,23819882,23810502,23798323,23788647,23786223,23783028,23765628,23762346,23754774,23754307,23752087	Gene ID= ENSG00000119778.14 TPM= 4.09 Transcript Type= NA
chr2	23784716	23927205	23784716	23927205	-	transcript617.chr2.nic@ATAD2B	transcript617.chr2.nic	protein_coding	23926555,23895819,23888350,23887832,23885727,23884765,23880639,23875829,23869663,23867835,23864809,23863381,23857415,23833919,23828849,23823258,23819747,23810316,23798138,23788512,23784716	23927205,23895970,23888399,23887985,23885829,23884873,23880755,23875904,23869761,23867946,23864924,23863555,23857503,23834078,23828939,23823569,23819882,23810502,23798323,23788647,23786223	Gene ID= ENSG00000119778.14 TPM= 2.92 Transcript Type= NA
chr2	23940419	24004909	23940419	24004909	+	ENST00000309033.4@UBXN2A	ENST00000309033.4	protein_coding	23940419,23958301,23971276,23976969,23982896,23984673,23999672	23940648,23958355,23971414,23977075,23983033,23984831,24004909	Gene ID= ENSG00000173960.13 TPM= 1.17 Transcript Type= protein_coding
chr2	24029340	24047353	24029340	24047353	-	ENST00000295148.8@WDCP	ENST00000295148.8	protein_coding	24047314,24037677,24032829,24029340	24047353,24039512,24032946,24031162	Gene ID= ENSG00000163026.11 TPM= 3.5 Transcript Type= protein_coding
chr2	24049701	24063681	24049701	24063681	+	ENST00000380991.8@FKBP1B	ENST00000380991.8	protein_coding	24049701,24053902,24060814,24063019	24049886,24053949,24060926,24063681	Gene ID= ENSG00000119782.13 TPM= 9.34 Transcript Type= protein_coding
chr2	24049714	24063681	24049714	24063681	+	ENST00000380986.8@FKBP1B	ENST00000380986.8	protein_coding	24049714,24053902,24060814,24063064	24049886,24053949,24060926,24063681	Gene ID= ENSG00000119782.13 TPM= 9.34 Transcript Type= protein_coding
chr2	24049771	24063671	24049771	24063671	+	ENST00000452109.1@FKBP1B	ENST00000452109.1	protein_coding	24049771,24053902,24054473,24060814,24063064	24049886,24053949,24054540,24060926,24063671	Gene ID= ENSG00000119782.13 TPM= 1.17 Transcript Type= protein_coding
chr2	24067584	24076443	24067584	24076443	-	ENST00000233468.4@SF3B6	ENST00000233468.4	protein_coding	24076200,24074076,24068321,24067584	24076443,24074194,24068459,24067851	Gene ID= ENSG00000115128.6 TPM= 58.38 Transcript Type= protein_coding
chr2	24076526	24097468	24076526	24097468	+	ENST00000469867.1@FAM228B	ENST00000469867.1	protein_coding	24076526,24080879,24095141	24076615,24080955,24097468	Gene ID= ENSG00000219626.8 TPM= 2.34 Transcript Type= processed_transcript
chr2	24076833	24097468	24076833	24097468	+	transcript670.chr2.nic@FAM228B	transcript670.chr2.nic	protein_coding	24076833,24080876,24095141	24076969,24080955,24097468	Gene ID= ENSG00000219626.8 TPM= 4.67 Transcript Type= NA
chr2	24123480	24169637	24123480	24169637	+	ENST00000615575.4@FAM228B	ENST00000615575.4	protein_coding	24123480,24124330,24135119,24137909,24139370,24146748,24146930,24161506,24164198,24167627,24169356	24123533,24124460,24135187,24138100,24139450,24146835,24147086,24161613,24164335,24167683,24169637	Gene ID= ENSG00000219626.8 TPM= 1.17 Transcript Type= protein_coding
chr2	24077433	24085215	24077433	24085215	-	ENST00000335934.8@TP53I3	ENST00000335934.8	protein_coding	24084731,24084189,24082885,24080819,24079444,24077433	24085215,24084331,24083152,24081031,24079640,24077761	Gene ID= ENSG00000115129.13 TPM= 38.53 Transcript Type= protein_coding
chr2	24077435	24085181	24077435	24085181	-	ENST00000238721.8@TP53I3	ENST00000238721.8	protein_coding	24084189,24082885,24080819,24079444,24077435	24085181,24083152,24081031,24079640,24077761	Gene ID= ENSG00000115129.13 TPM= 28.02 Transcript Type= protein_coding
chr2	24077433	24085052	24077433	24085052	-	transcript662.chr2.nic@TP53I3	transcript662.chr2.nic	protein_coding	24084189,24083001,24080819,24079444,24077433	24085052,24083152,24081031,24079640,24077761	Gene ID= ENSG00000115129.13 TPM= 3.5 Transcript Type= NA
chr2	24158198	24160600	24158198	24160600	-	transcript672.chr2.nnic@NA	transcript672.chr2.nnic	NA	24158198	24160600	Gene ID= novel_gene_chr2_673 TPM= 3.5 Transcript Type= NA
chr2	24202864	24360545	24202864	24360545	-	transcript679.chr2.nnic@ITSN2	transcript679.chr2.nnic	protein_coding	24360304,24328052,24315132,24313460,24312212,24310489,24310284,24308617,24303799,24301965,24301154,24299909,24298665,24295664,24293688,24286212,24275713,24271805,24270671,24261561,24261106,24257888,24254367,24252345,24248837,24248629,24246797,24246129,24220945,24217907,24216049,24212650,24210780,24209818,24209100,24208237,24205214,24204245,24202864	24360545,24328115,24315224,24313523,24312375,24310692,24310380,24308756,24303862,24302102,24301239,24300171,24298814,24295804,24293775,24286351,24275849,24271941,24270768,24261742,24261250,24258093,24254431,24252511,24248882,24248750,24246893,24246320,24221066,24218013,24216232,24212748,24210947,24210033,24209221,24208319,24205297,24204418,24203783	Gene ID= ENSG00000198399.14 TPM= 15.76 Transcript Type= NA
chr2	24238933	24360538	24238933	24360538	-	transcript681.chr2.nnic@ITSN2	transcript681.chr2.nnic	protein_coding	24360304,24328052,24315132,24313460,24312212,24310489,24310284,24308617,24303799,24301965,24301154,24299909,24298665,24295664,24293688,24286212,24275713,24271805,24270671,24261561,24261106,24257888,24254367,24252345,24248837,24248629,24246797,24246129,24238933	24360538,24328115,24315224,24313523,24312375,24310692,24310380,24308756,24303862,24302102,24301239,24300171,24298814,24295804,24293775,24286351,24275849,24271941,24270768,24261742,24261250,24258093,24254431,24252511,24248882,24248750,24246893,24246320,24242206	Gene ID= ENSG00000198399.14 TPM= 5.84 Transcript Type= NA
chr2	24263731	24360545	24263731	24360545	-	transcript683.chr2.nnic@ITSN2	transcript683.chr2.nnic	protein_coding	24360304,24328052,24315132,24313460,24312212,24310489,24310284,24308617,24303799,24301965,24301154,24299909,24298665,24295664,24293688,24286212,24275713,24271766,24270671,24263731	24360545,24328115,24315224,24313523,24312375,24310692,24310380,24308756,24303862,24302102,24301239,24300171,24298814,24295804,24293775,24286351,24275849,24271941,24270768,24265092	Gene ID= ENSG00000198399.14 TPM= 2.34 Transcript Type= NA
chr2	24202864	24246508	24202864	24246508	-	transcript689.chr2.nic@ITSN2	transcript689.chr2.nic	protein_coding	24246129,24220945,24217907,24216049,24212650,24210780,24209818,24209100,24208237,24205214,24204245,24202864	24246508,24221066,24218013,24216232,24212748,24210947,24210033,24209221,24208319,24205297,24204418,24203783	Gene ID= ENSG00000198399.14 TPM= 20.43 Transcript Type= NA
chr2	24313083	24360524	24313083	24360524	-	transcript690.chr2.nic@ITSN2	transcript690.chr2.nic	protein_coding	24360304,24328052,24313083	24360524,24328115,24315224	Gene ID= ENSG00000198399.14 TPM= 3.5 Transcript Type= NA
chr2	24247202	24251322	24247202	24251322	+	transcript692.chr2.nnic@NA	transcript692.chr2.nnic	NA	24247202	24251322	Gene ID= novel_gene_chr2_693 TPM= 3.5 Transcript Type= NA
chr2	24491241	24768541	24491241	24768541	+	transcript695.chr2.nnic@NCOA1	transcript695.chr2.nnic	protein_coding	24491241,24564295,24584476,24643966,24658661,24665749,24673366,24682951,24691481,24693252,24697658,24705086,24706568,24710931,24726589,24728308,24729501,24739432,24741784,24751982,24757973,24762687,24768079,24768221	24491602,24564430,24584560,24644122,24658766,24665915,24673463,24683128,24691660,24693347,24697798,24705233,24707888,24711111,24726706,24728476,24729815,24739533,24742186,24752156,24758156,24762776,24768135,24768541	Gene ID= ENSG00000084676.15 TPM= 8.17 Transcript Type= NA
chr2	24491257	24768541	24491257	24768541	+	transcript697.chr2.nnic@NCOA1	transcript697.chr2.nnic	protein_coding	24491257,24584476,24643966,24658661,24665749,24673366,24682951,24691481,24693252,24697658,24705086,24706568,24710931,24726589,24728308,24729501,24739432,24741784,24751982,24757973,24762687,24768079,24768221	24491602,24584560,24644122,24658766,24665915,24673463,24683128,24691660,24693347,24697798,24705233,24707888,24711111,24726706,24728476,24729815,24739533,24742186,24752156,24758156,24762776,24768135,24768541	Gene ID= ENSG00000084676.15 TPM= 5.84 Transcript Type= NA
chr2	24507437	24512030	24507437	24512030	-	transcript703.chr2.nnic@NA	transcript703.chr2.nnic	NA	24507437	24512030	Gene ID= novel_gene_chr2_704 TPM= 5.84 Transcript Type= NA
chr2	24789734	24793382	24789734	24793382	-	ENST00000328379.5@PTRHD1	ENST00000328379.5	protein_coding	24793126,24789734	24793382,24790581	Gene ID= ENSG00000184924.5 TPM= 3.5 Transcript Type= protein_coding
chr2	24793145	24822376	24793145	24822376	+	ENST00000380834.6@CENPO	ENST00000380834.6	protein_coding	24793145,24793852,24799675,24814376,24815497,24816646,24817670,24819354	24793501,24793965,24799844,24814493,24815756,24816817,24817841,24822376	Gene ID= ENSG00000138092.10 TPM= 2.34 Transcript Type= protein_coding
chr2	24793145	24822376	24793145	24822376	+	ENST00000473706.5@CENPO	ENST00000473706.5	protein_coding	24793145,24799675,24814376,24815497,24816646,24817670,24819354	24793501,24799844,24814493,24815756,24816817,24817841,24822376	Gene ID= ENSG00000138092.10 TPM= 4.67 Transcript Type= protein_coding
chr2	24819169	24920237	24819169	24920237	-	transcript707.chr2.nic@ADCY3	transcript707.chr2.nic	protein_coding	24919683,24918313,24872570,24842254,24841556,24841259,24839873,24838445,24836917,24834794,24834485,24831662,24830709,24827902,24827546,24826045,24824378,24823209,24822511,24821517,24820724,24820384,24819169	24920237,24919184,24872719,24842384,24841667,24841386,24840031,24838622,24837045,24834936,24834646,24831749,24830825,24828161,24827608,24826126,24824536,24823355,24822630,24821640,24820848,24820451,24820114	Gene ID= ENSG00000138031.14 TPM= 4.58 Transcript Type= NA
chr2	24819169	24920237	24819169	24920237	-	transcript711.chr2.nic@ADCY3	transcript711.chr2.nic	protein_coding	24919683,24918313,24872570,24842254,24841556,24841259,24839873,24838445,24836917,24834794,24834485,24831662,24830709,24827902,24827546,24826045,24824378,24823209,24822511,24821517,24820724,24819169	24920237,24919184,24872719,24842384,24841667,24841386,24840031,24838622,24837045,24834936,24834646,24831749,24830825,24828023,24827608,24826126,24824536,24823355,24822630,24821640,24820848,24820114	Gene ID= ENSG00000138031.14 TPM= 10.41 Transcript Type= NA
chr2	24819169	24920237	24819169	24920237	-	transcript712.chr2.nic@ADCY3	transcript712.chr2.nic	protein_coding	24919683,24918313,24872570,24842254,24841556,24841259,24839873,24838445,24836917,24834794,24834485,24831662,24830709,24827902,24827546,24826045,24824378,24823209,24822511,24821517,24820724,24819169	24920237,24919184,24872719,24842384,24841667,24841386,24840031,24838622,24837045,24834936,24834646,24831749,24830825,24828161,24827608,24826126,24824536,24823355,24822630,24821640,24820848,24820114	Gene ID= ENSG00000138031.14 TPM= 53.8 Transcript Type= NA
chr2	24819169	24887200	24819169	24887200	-	transcript717.chr2.nnic@ADCY3	transcript717.chr2.nnic	protein_coding	24887093,24872570,24842254,24841556,24841259,24839873,24838445,24836917,24834794,24834485,24831662,24830709,24827902,24827546,24826045,24824378,24823209,24822511,24821517,24820724,24819169	24887200,24872719,24842384,24841667,24841386,24840031,24838622,24837045,24834936,24834646,24831749,24830825,24828161,24827608,24826126,24824536,24823355,24822630,24821640,24820848,24820114	Gene ID= ENSG00000138031.14 TPM= 9.54 Transcript Type= NA
chr2	24819169	24920237	24819169	24920237	-	transcript720.chr2.nic@ADCY3	transcript720.chr2.nic	protein_coding	24919683,24918313,24872570,24842254,24841556,24841259,24839873,24838445,24836917,24834794,24834485,24831662,24830709,24827902,24827546,24826045,24824378,24823209,24822511,24821517,24819169	24920237,24919184,24872719,24842384,24841667,24841386,24840031,24838622,24837045,24834936,24834646,24831749,24830825,24828161,24827608,24826126,24824536,24823355,24822630,24821640,24820848	Gene ID= ENSG00000138031.14 TPM= 5.74 Transcript Type= NA
chr2	24943636	24971615	24943636	24971615	-	transcript731.chr2.nic@DNAJC27	transcript731.chr2.nic	protein_coding	24971416,24967211,24963405,24957810,24957043,24953550,24951394,24943636	24971615,24967293,24963474,24957974,24957165,24953635,24951554,24947748	Gene ID= ENSG00000115137.11 TPM= 2.34 Transcript Type= NA
chr2	24943636	24972078	24943636	24972078	-	transcript732.chr2.nic@DNAJC27	transcript732.chr2.nic	protein_coding	24971818,24967211,24963405,24958547,24957810,24957043,24951394,24943636	24972078,24967293,24963474,24958601,24957974,24957165,24951554,24947748	Gene ID= ENSG00000115137.11 TPM= 2.34 Transcript Type= NA
chr2	24943636	24972094	24943636	24972094	-	ENST00000264711.6@DNAJC27	ENST00000264711.6	protein_coding	24971818,24967211,24963405,24957810,24957043,24951394,24943636	24972094,24967293,24963474,24957974,24957165,24951554,24947748	Gene ID= ENSG00000115137.11 TPM= 1.17 Transcript Type= protein_coding
chr2	25160360	25161643	25160360	25161643	-	transcript739.chr2.nnic@NA	transcript739.chr2.nnic	NA	25160360	25161643	Gene ID= novel_gene_chr2_740 TPM= 3.5 Transcript Type= NA
chr2	25227855	25342590	25227855	25342590	-	ENST00000264709.7@DNMT3A	ENST00000264709.7	protein_coding	25342430,25313913,25300139,25282441,25275500,25274941,25248037,25247591,25247051,25246620,25246160,25246020,25245253,25244540,25244155,25243898,25241562,25240640,25240302,25239130,25236936,25235707,25227855	25342590,25314161,25300243,25282711,25275543,25275087,25248252,25247749,25247158,25246776,25246309,25246064,25245332,25244652,25244338,25243982,25241707,25240730,25240450,25239215,25237005,25235825,25234420	Gene ID= ENSG00000119772.16 TPM= 17.51 Transcript Type= protein_coding
chr2	25281452	25342004	25281452	25342004	-	transcript752.chr2.nic@DNMT3A	transcript752.chr2.nic	protein_coding	25341826,25313913,25300139,25281452	25342004,25314161,25300243,25282711	Gene ID= ENSG00000119772.16 TPM= 3.5 Transcript Type= NA
chr2	25232976	25341885	25232976	25341885	-	ENST00000321117.9@DNMT3A	ENST00000321117.9	protein_coding	25341826,25313913,25300139,25282441,25275500,25274941,25248037,25247591,25247051,25246620,25246160,25246020,25245253,25244540,25244155,25243898,25241562,25240640,25240302,25239130,25236936,25235707,25232976	25341885,25314161,25300243,25282711,25275543,25275087,25248252,25247749,25247158,25246776,25246309,25246064,25245332,25244652,25244338,25243982,25241707,25240730,25240450,25239215,25237005,25235825,25234420	Gene ID= ENSG00000119772.16 TPM= 10.51 Transcript Type= protein_coding
chr2	25377245	25673647	25377245	25673647	-	ENST00000288642.12@DTNB	ENST00000288642.12	protein_coding	25673386,25652594,25639014,25628171,25607236,25596086,25580721,25576838,25531473,25482796,25455405,25451548,25433910,25432886,25427535,25388202,25387289,25383836,25379290,25377245	25673647,25652661,25639094,25628384,25607321,25596240,25580826,25577004,25531597,25482873,25455494,25451635,25433995,25432999,25427631,25388361,25387378,25383889,25379323,25377553	Gene ID= ENSG00000138101.18 TPM= 8.17 Transcript Type= protein_coding
chr2	25377243	25673578	25377243	25673578	-	transcript758.chr2.nnic@DTNB	transcript758.chr2.nnic	protein_coding	25673386,25652594,25639014,25628171,25607236,25596086,25580721,25576838,25531473,25482796,25455405,25451548,25433910,25432886,25427535,25419515,25388202,25387289,25379290,25377243	25673578,25652661,25639094,25628384,25607321,25596240,25580826,25577004,25531597,25482873,25455494,25451635,25433995,25432999,25427649,25419535,25388361,25387378,25379323,25377553	Gene ID= ENSG00000138101.18 TPM= 3.5 Transcript Type= NA
chr2	25576222	25673645	25576222	25673645	-	transcript765.chr2.nic@DTNB	transcript765.chr2.nic	protein_coding	25673386,25652594,25639014,25628171,25607236,25596086,25580721,25576222	25673645,25652661,25639094,25628384,25607321,25596240,25580826,25577004	Gene ID= ENSG00000138101.18 TPM= 3.5 Transcript Type= NA
chr2	25377258	25673561	25377258	25673561	-	ENST00000407186.5@DTNB	ENST00000407186.5	protein_coding	25673386,25652594,25639014,25628171,25607236,25596086,25580721,25576838,25531473,25482796,25451548,25433910,25432886,25427535,25388202,25387289,25383836,25379290,25377258	25673561,25652661,25639094,25628384,25607321,25596240,25580826,25577004,25531597,25482873,25451635,25433995,25432999,25427631,25388361,25387378,25383889,25379323,25377553	Gene ID= ENSG00000138101.18 TPM= 1.17 Transcript Type= protein_coding
chr2	25377243	25673634	25377243	25673634	-	ENST00000407661.7@DTNB	ENST00000407661.7	protein_coding	25673386,25652594,25639014,25628171,25607236,25596086,25580721,25576838,25531473,25482796,25455405,25451548,25433910,25432886,25427535,25419515,25388202,25387289,25379290,25377243	25673634,25652661,25639094,25628384,25607321,25596240,25580826,25577004,25531597,25482873,25455494,25451635,25433995,25432999,25427631,25419535,25388361,25387378,25379323,25377553	Gene ID= ENSG00000138101.18 TPM= 19.85 Transcript Type= protein_coding
chr2	25927780	25982760	25927780	25982760	-	transcript770.chr2.nnic@KIF3C	transcript770.chr2.nnic	protein_coding	25980373,25956343,25955541,25954267,25951789,25929955,25929305,25927780	25982760,25956444,25956166,25954385,25951905,25930063,25929477,25929071	Gene ID= ENSG00000084731.14 TPM= 2.92 Transcript Type= NA
chr2	25926596	25982497	25926596	25982497	-	ENST00000264712.7@KIF3C	ENST00000264712.7	protein_coding	25980373,25956343,25955541,25954267,25951789,25929955,25929305,25926596	25982497,25956444,25955663,25954385,25951905,25930063,25929477,25929071	Gene ID= ENSG00000084731.14 TPM= 6.42 Transcript Type= protein_coding
chr2	26034110	26137454	26034110	26137454	+	ENST00000264710.4@RAB10	ENST00000264710.4	protein_coding	26034110,26098662,26109768,26127144,26127850,26134938	26034735,26098722,26109906,26127233,26127951,26137454	Gene ID= ENSG00000084733.10 TPM= 184.48 Transcript Type= protein_coding
chr2	26173091	26189663	26173091	26189663	+	ENST00000401533.6@GAREM2	ENST00000401533.6	protein_coding	26173091,26176344,26182967,26184233,26186189,26187231	26173332,26176484,26183097,26185276,26186358,26189663	Gene ID= ENSG00000157833.12 TPM= 4.67 Transcript Type= protein_coding
chr2	26190635	26244726	26190635	26244726	-	ENST00000380649.7@HADHA	ENST00000380649.7	protein_coding	26244530,26239102,26238934,26236855,26234217,26232160,26230192,26215053,26214443,26212570,26209780,26204062,26201149,26197691,26195092,26194570,26193577,26192310,26191483,26190635	26244726,26239143,26239004,26236988,26234355,26232279,26230294,26215175,26214561,26212626,26209889,26204196,26201320,26197777,26195232,26194638,26193772,26192424,26191628,26191395	Gene ID= ENSG00000084754.10 TPM= 29.19 Transcript Type= protein_coding
chr2	26244895	26290468	26244895	26290468	+	ENST00000317799.9@HADHB	ENST00000317799.9	protein_coding	26244895,26254247,26254430,26263380,26269953,26273651,26277073,26278614,26279135,26279994,26282845,26283004,26284117,26284883,26285407,26289918	26244990,26254318,26254474,26263479,26269997,26273750,26277160,26278801,26279315,26280115,26282924,26283051,26284204,26284957,26285571,26290468	Gene ID= ENSG00000138029.13 TPM= 173.19 Transcript Type= protein_coding
chr2	26285741	26285963	26285741	26285963	-	transcript824.chr2.nnic@NA	transcript824.chr2.nnic	NA	26285741	26285963	Gene ID= novel_gene_chr2_825 TPM= 2.34 Transcript Type= NA
chr2	26457203	26478042	26457203	26478042	-	ENST00000339598.7@OTOF	ENST00000339598.7	protein_coding	26477844,26477649,26477416,26477172,26476891,26476128,26475914,26475359,26474513,26473991,26473406,26473132,26472519,26471121,26470593,26468408,26467365,26467099,26466714,26465949,26465672,26464869,26463964,26463483,26462083,26461696,26460852,26460647,26457203	26478042,26477749,26477506,26477288,26477043,26476317,26476038,26475493,26474674,26474110,26473567,26473294,26472589,26471150,26470721,26468474,26467501,26467233,26466851,26466076,26465842,26465029,26464106,26463571,26462181,26461937,26461030,26460747,26458220	Gene ID= ENSG00000115155.16 TPM= 1.17 Transcript Type= protein_coding
chr2	26692731	26731188	26692731	26731188	+	transcript833.chr2.nnic@KCNK3	transcript833.chr2.nnic	protein_coding	26692731,26727667,26729914	26693158,26728932,26731188	Gene ID= ENSG00000171303.6 TPM= 8.17 Transcript Type= NA
chr2	26692751	26733420	26692751	26733420	+	ENST00000302909.3@KCNK3	ENST00000302909.3	protein_coding	26692751,26727667	26693158,26733420	Gene ID= ENSG00000171303.6 TPM= 30.36 Transcript Type= protein_coding
chr2	26697160	26699208	26697160	26699208	+	transcript839.chr2.nnic@NA	transcript839.chr2.nnic	NA	26697160	26699208	Gene ID= novel_gene_chr2_840 TPM= 2.34 Transcript Type= NA
chr2	26785997	26794593	26785997	26794593	+	ENST00000335756.8@CENPA	ENST00000335756.8	protein_coding	26785997,26792131,26792756,26793145,26793812	26786296,26792240,26792833,26793326,26794593	Gene ID= ENSG00000115163.14 TPM= 1.17 Transcript Type= protein_coding
chr2	26768366	26771918	26768366	26771918	-	transcript849.chr2.nnic@NA	transcript849.chr2.nnic	NA	26768366	26771918	Gene ID= novel_gene_chr2_850 TPM= 4.67 Transcript Type= NA
chr2	26784450	26785496	26784450	26785496	-	transcript851.chr2.nnic@NA	transcript851.chr2.nnic	NA	26784450	26785496	Gene ID= novel_gene_chr2_852 TPM= 4.67 Transcript Type= NA
chr2	26970612	27027196	26970612	27027196	+	ENST00000233121.6@MAPRE3	ENST00000233121.6	protein_coding	26970612,27022212,27023332,27024096,27025583,27025880,27026280	26970802,27022339,27023477,27024297,27025737,27026032,27027196	Gene ID= ENSG00000084764.10 TPM= 26.27 Transcript Type= protein_coding
chr2	27023617	27027196	27023617	27027196	+	transcript857.chr2.nic@MAPRE3	transcript857.chr2.nic	protein_coding	27023617,27025880,27026280	27025737,27026032,27027196	Gene ID= ENSG00000084764.10 TPM= 9.34 Transcript Type= NA
chr2	26970658	27027196	26970658	27027196	+	ENST00000405074.7@MAPRE3	ENST00000405074.7	protein_coding	26970658,27022212,27023332,27024096,27025583,27025880,27026280	26970802,27022339,27023477,27024252,27025737,27026032,27027196	Gene ID= ENSG00000084764.10 TPM= 12.26 Transcript Type= protein_coding
chr2	27032976	27041695	27032976	27041695	+	transcript869.chr2.nic@TMEM214	transcript869.chr2.nic	protein_coding	27032976,27034067,27035135,27035970,27036487,27036705,27037077,27037561,27038146,27038484,27038702,27039047,27039741,27040030,27040345,27040711	27033166,27034266,27035728,27036052,27036592,27036786,27037178,27037702,27038237,27038532,27038815,27039164,27039837,27040198,27040496,27041695	Gene ID= ENSG00000119777.18 TPM= 24.03 Transcript Type= NA
chr2	27033004	27041695	27033004	27041695	+	transcript874.chr2.nic@TMEM214	transcript874.chr2.nic	protein_coding	27033004,27034067,27035135,27036487,27037077,27037561,27038146,27038484,27038702,27039047,27040030,27040345,27040711	27033166,27034266,27036052,27036786,27037178,27037702,27038237,27038532,27038815,27039164,27040198,27040496,27041695	Gene ID= ENSG00000119777.18 TPM= 23.45 Transcript Type= NA
chr2	27032954	27041695	27032954	27041695	+	ENST00000238788.13@TMEM214	ENST00000238788.13	protein_coding	27032954,27034067,27035135,27035594,27035970,27036487,27036705,27037077,27037561,27038146,27038484,27038702,27039047,27039741,27040030,27040345,27040711	27033166,27034266,27035285,27035728,27036052,27036592,27036786,27037178,27037702,27038237,27038532,27038815,27039164,27039837,27040198,27040496,27041695	Gene ID= ENSG00000119777.18 TPM= 90.58 Transcript Type= protein_coding
chr2	27032954	27041694	27032954	27041694	+	ENST00000321326.11@TMEM214	ENST00000321326.11	protein_coding	27032954,27034067,27035135,27035594,27035970,27036487,27036705,27037077,27037561,27038146,27038484,27038702,27039047,27039741,27040030,27040345,27040711,27041244	27033166,27034266,27035285,27035728,27036052,27036592,27036786,27037178,27037702,27038237,27038532,27038815,27039164,27039837,27040198,27040496,27040954,27041694	Gene ID= ENSG00000119777.18 TPM= 17.22 Transcript Type= nonsense_mediated_decay
chr2	27051678	27059535	27051678	27059535	+	ENST00000323064.12@AGBL5	ENST00000323064.12	protein_coding	27051678,27052913,27053402,27053896,27054630,27055075,27055682,27056623,27057303,27058400,27059190	27051793,27053173,27053573,27054059,27054807,27055253,27056138,27056792,27057438,27058602,27059535	Gene ID= ENSG00000084693.15 TPM= 17.9 Transcript Type= protein_coding
chr2	27051646	27070622	27051646	27070622	+	ENST00000487078.5@AGBL5	ENST00000487078.5	protein_coding	27051646,27052913,27053402,27053896,27054630,27055075,27055682,27056623,27057303,27058400,27059190,27067494,27068632,27069048,27069573,27070092	27051793,27053173,27053573,27054059,27054807,27055253,27056138,27056792,27057438,27058602,27059404,27067646,27068744,27069094,27069706,27070622	Gene ID= ENSG00000084693.15 TPM= 6.22 Transcript Type= nonsense_mediated_decay
chr2	27051681	27070620	27051681	27070620	+	ENST00000360131.4@AGBL5	ENST00000360131.4	protein_coding	27051681,27052913,27053402,27053896,27054630,27055075,27055682,27056623,27057303,27058400,27059190,27067494,27068632,27069573,27070092	27051793,27053173,27053573,27054059,27054807,27055253,27056138,27056792,27057438,27058602,27059404,27067646,27068744,27069706,27070620	Gene ID= ENSG00000084693.15 TPM= 6.22 Transcript Type= protein_coding
chr2	27070472	27071773	27070472	27071773	-	ENST00000456793.1@OST4	ENST00000456793.1	protein_coding	27071601,27071326,27070472	27071773,27071463,27070721	Gene ID= ENSG00000228474.5 TPM= 133.69 Transcript Type= protein_coding
chr2	27070487	27071649	27070487	27071649	-	ENST00000429985.1@OST4	ENST00000429985.1	protein_coding	27071326,27070487	27071649,27070721	Gene ID= ENSG00000228474.5 TPM= 5.25 Transcript Type= protein_coding
chr2	27078567	27086408	27078567	27086408	+	ENST00000380320.8@EMILIN1	ENST00000380320.8	protein_coding	27078567,27080151,27080732,27082083,27084415,27084991,27085160,27085678	27079235,27080270,27080952,27084011,27084531,27085008,27085297,27086408	Gene ID= ENSG00000138080.13 TPM= 309.41 Transcript Type= protein_coding
chr2	27084942	27086555	27084942	27086555	-	transcript902.chr2.nnic@NA	transcript902.chr2.nnic	NA	27084942	27086555	Gene ID= novel_gene_chr2_903 TPM= 5.84 Transcript Type= NA
chr2	27086729	27099969	27086729	27099969	+	transcript893.chr2.nnic@KHK	transcript893.chr2.nnic	protein_coding	27086729,27092332,27096729,27097503,27099196,27099420,27099665	27087351,27092448,27096801,27097649,27099284,27099577,27099969	Gene ID= ENSG00000138030.12 TPM= 2.34 Transcript Type= NA
chr2	27086747	27100751	27086747	27100751	+	ENST00000260599.10@KHK	ENST00000260599.10	protein_coding	27086747,27092332,27094477,27096729,27097503,27099196,27099420,27099665	27087351,27092448,27094611,27096801,27097649,27099284,27099577,27100751	Gene ID= ENSG00000138030.12 TPM= 2.34 Transcript Type= protein_coding
chr2	27130756	27134675	27130756	27134675	-	ENST00000260643.6@PREB	ENST00000260643.6	protein_coding	27134287,27133532,27133117,27132843,27132603,27132230,27132010,27131672,27130756	27134675,27133721,27133337,27132923,27132727,27132403,27132082,27131831,27131508	Gene ID= ENSG00000138073.13 TPM= 112.77 Transcript Type= protein_coding
chr2	27130756	27134674	27130756	27134674	-	transcript908.chr2.nic@PREB	transcript908.chr2.nic	protein_coding	27134287,27133117,27132843,27132603,27132230,27132010,27131672,27130756	27134674,27133721,27132923,27132727,27132403,27132082,27131831,27131508	Gene ID= ENSG00000138073.13 TPM= 19.94 Transcript Type= NA
chr2	27130756	27134674	27130756	27134674	-	transcript911.chr2.nic@PREB	transcript911.chr2.nic	protein_coding	27134287,27133532,27133117,27132843,27132603,27132230,27132010,27130756	27134674,27133721,27133337,27132923,27132727,27132403,27132082,27131508	Gene ID= ENSG00000138073.13 TPM= 4.96 Transcript Type= NA
chr2	27130756	27134638	27130756	27134638	-	transcript913.chr2.nnic@PREB	transcript913.chr2.nnic	protein_coding	27134287,27132843,27132603,27132204,27132010,27131672,27130756	27134638,27132923,27132727,27132403,27132082,27131831,27131508	Gene ID= ENSG00000138073.13 TPM= 3.79 Transcript Type= NA
chr2	27130756	27134650	27130756	27134650	-	transcript914.chr2.nic@PREB	transcript914.chr2.nic	protein_coding	27133117,27132843,27132603,27132230,27132010,27131672,27130756	27134650,27132923,27132727,27132403,27132082,27131831,27131508	Gene ID= ENSG00000138073.13 TPM= 11.48 Transcript Type= NA
chr2	27130775	27134612	27130775	27134612	-	ENST00000406567.7@PREB	ENST00000406567.7	protein_coding	27134287,27133532,27133117,27132843,27132603,27132010,27131672,27130775	27134612,27133721,27133337,27132923,27132727,27132082,27131831,27131508	Gene ID= ENSG00000138073.13 TPM= 2.34 Transcript Type= protein_coding
chr2	27199587	27211830	27199587	27211830	-	transcript921.chr2.nic@SLC5A6	transcript921.chr2.nic	protein_coding	27211767,27211467,27207258,27206877,27206483,27206026,27205350,27204791,27204461,27203779,27203233,27202813,27201988,27201666,27201350,27200998,27199587	27211830,27211533,27207790,27206942,27206534,27206093,27205504,27204931,27204590,27203867,27203345,27202880,27202074,27201847,27201453,27201113,27200579	Gene ID= ENSG00000138074.14 TPM= 3.5 Transcript Type= NA
chr2	27199587	27211969	27199587	27211969	-	transcript922.chr2.nic@SLC5A6	transcript922.chr2.nic	protein_coding	27211900,27211467,27207258,27206877,27206483,27206026,27205350,27204791,27204461,27203779,27203233,27202813,27201988,27201666,27201350,27200998,27199587	27211969,27211533,27207790,27206942,27206534,27206093,27205504,27204931,27204590,27203867,27203345,27202880,27202074,27201847,27201453,27201113,27200579	Gene ID= ENSG00000138074.14 TPM= 9.34 Transcript Type= NA
chr2	27199587	27211969	27199587	27211969	-	transcript925.chr2.nnic@SLC5A6	transcript925.chr2.nnic	protein_coding	27211900,27211467,27207258,27206877,27206483,27206026,27205412,27204791,27204461,27203779,27203233,27202813,27201988,27201666,27201350,27200998,27199587	27211969,27211533,27207790,27206942,27206534,27206093,27205504,27204931,27204590,27203867,27203345,27202880,27202074,27201847,27201453,27201113,27200579	Gene ID= ENSG00000138074.14 TPM= 3.5 Transcript Type= NA
chr2	27199587	27212294	27199587	27212294	-	transcript930.chr2.nic@SLC5A6	transcript930.chr2.nic	protein_coding	27212020,27211467,27207258,27206877,27206483,27206026,27204791,27204461,27203779,27203233,27202813,27201988,27201666,27201350,27200998,27199587	27212294,27211533,27207790,27206942,27206534,27206093,27205504,27204590,27203867,27203345,27202880,27202074,27201847,27201453,27201113,27200579	Gene ID= ENSG00000138074.14 TPM= 11.68 Transcript Type= NA
chr2	27199587	27212286	27199587	27212286	-	ENST00000310574.7@SLC5A6	ENST00000310574.7	protein_coding	27212020,27211467,27207258,27206877,27206483,27206026,27205350,27204791,27204461,27203779,27203233,27202813,27201988,27201666,27201350,27200998,27199587	27212286,27211533,27207790,27206942,27206534,27206093,27205504,27204931,27204590,27203867,27203345,27202880,27202074,27201847,27201453,27201113,27200579	Gene ID= ENSG00000138074.14 TPM= 32.69 Transcript Type= protein_coding
chr2	27212015	27217156	27212015	27217156	+	transcript941.chr2.nic@ATRAID	transcript941.chr2.nic	protein_coding	27212015,27215321,27215474,27215632,27216523,27216844	27213298,27215392,27215545,27215753,27216620,27217156	Gene ID= ENSG00000138085.16 TPM= 7.01 Transcript Type= NA
chr2	27212370	27217178	27212370	27217178	+	ENST00000405489.7@ATRAID	ENST00000405489.7	protein_coding	27212370,27213177,27215321,27215474,27215632,27216523,27216844	27212607,27213298,27215392,27215545,27215753,27216620,27217178	Gene ID= ENSG00000138085.16 TPM= 44.37 Transcript Type= protein_coding
chr2	27309492	27323057	27309492	27323057	-	transcript983.chr2.nnic@MPV17	transcript983.chr2.nnic	protein_coding	27322990,27322448,27312994,27312680,27312494,27312214,27311899,27309492	27323057,27322522,27313109,27312772,27312589,27312246,27311951,27309981	Gene ID= ENSG00000115204.14 TPM= 7.39 Transcript Type= NA
chr2	27309492	27323108	27309492	27323108	-	transcript985.chr2.nnic@MPV17	transcript985.chr2.nnic	protein_coding	27323052,27322448,27312994,27312680,27312548,27312214,27311899,27309492	27323108,27322522,27313074,27312772,27312589,27312246,27311951,27309981	Gene ID= ENSG00000115204.14 TPM= 2.34 Transcript Type= NA
chr2	27309494	27323102	27309494	27323102	-	ENST00000380044.5@MPV17	ENST00000380044.5	protein_coding	27323052,27322448,27312994,27312680,27312494,27312214,27311899,27309494	27323102,27322522,27313109,27312772,27312589,27312246,27311951,27309981	Gene ID= ENSG00000115204.14 TPM= 51.76 Transcript Type= protein_coding
chr2	27309540	27323083	27309540	27323083	-	ENST00000426513.6@MPV17	ENST00000426513.6	protein_coding	27323052,27322448,27312994,27312680,27312494,27312214,27311899,27309540	27323083,27322522,27313074,27312772,27312589,27312246,27311951,27309981	Gene ID= ENSG00000115204.14 TPM= 5.84 Transcript Type= nonsense_mediated_decay
chr2	27309492	27322564	27309492	27322564	-	ENST00000233545.6@MPV17	ENST00000233545.6	protein_coding	27322448,27312994,27312680,27312494,27312214,27311899,27309492	27322564,27313109,27312772,27312589,27312246,27311951,27309981	Gene ID= ENSG00000115204.14 TPM= 9.73 Transcript Type= protein_coding
chr2	27325849	27357026	27325849	27357026	-	transcript945.chr2.nnic@GTF3C2	transcript945.chr2.nnic	protein_coding	27356739,27350314,27343308,27342826,27341948,27337926,27337481,27337244,27336198,27335917,27335598,27333974,27333655,27329379,27329121,27328844,27328468,27328037,27327177,27325849	27357026,27350389,27343578,27343147,27342233,27338020,27337558,27337342,27336425,27336028,27335706,27333999,27333784,27329523,27329282,27328931,27328596,27328189,27327284,27326893	Gene ID= ENSG00000115207.13 TPM= 9.92 Transcript Type= NA
chr2	27325849	27357034	27325849	27357034	-	ENST00000264720.7@GTF3C2	ENST00000264720.7	protein_coding	27356739,27343308,27342826,27341948,27337926,27337481,27337244,27336198,27335917,27335598,27333974,27333655,27329379,27329121,27328844,27328468,27328037,27327177,27325849	27357034,27343578,27343147,27342233,27338020,27337558,27337342,27336425,27336028,27335706,27333999,27333784,27329523,27329282,27328931,27328596,27328189,27327284,27326893	Gene ID= ENSG00000115207.13 TPM= 21.6 Transcript Type= protein_coding
chr2	27325849	27356947	27325849	27356947	-	transcript955.chr2.nic@GTF3C2	transcript955.chr2.nic	protein_coding	27356739,27343308,27342826,27341948,27337926,27337481,27337244,27336198,27335917,27335598,27333974,27333655,27329379,27329121,27328844,27328037,27327177,27325849	27356947,27343578,27343147,27342233,27338020,27337558,27337342,27336425,27336028,27335706,27333999,27333784,27329523,27329282,27328931,27328596,27327284,27326893	Gene ID= ENSG00000115207.13 TPM= 8.17 Transcript Type= NA
chr2	27357131	27360278	27357131	27360278	+	transcript994.chr2.nnic@NA	transcript994.chr2.nnic	NA	27357131	27360278	Gene ID= novel_gene_chr2_995 TPM= 12.84 Transcript Type= NA
chr2	27364352	27370486	27364352	27370486	-	ENST00000347454.8@EIF2B4	ENST00000347454.8	protein_coding	27370284,27369876,27369414,27369006,27368654,27368372,27368025,27367746,27367457,27367074,27366759,27364718,27364352	27370486,27369919,27369549,27369212,27368733,27368463,27368139,27367822,27367559,27367201,27366936,27364898,27364599	Gene ID= ENSG00000115211.15 TPM= 31.76 Transcript Type= protein_coding
chr2	27364358	27370338	27364358	27370338	-	transcript971.chr2.nic@EIF2B4	transcript971.chr2.nic	protein_coding	27370284,27369876,27369414,27369006,27368654,27368372,27368025,27367746,27367074,27366759,27364718,27364358	27370338,27369919,27369549,27369209,27368733,27368463,27368113,27367822,27367559,27366936,27364898,27364599	Gene ID= ENSG00000115211.15 TPM= 2.57 Transcript Type= NA
chr2	27364358	27370338	27364358	27370338	-	transcript974.chr2.nic@EIF2B4	transcript974.chr2.nic	protein_coding	27370284,27369876,27369414,27369006,27368654,27368372,27368025,27367746,27366759,27364718,27364358	27370338,27369919,27369549,27369212,27368733,27368463,27368113,27367822,27367559,27364898,27364599	Gene ID= ENSG00000115211.15 TPM= 2.57 Transcript Type= NA
chr2	27364358	27370338	27364358	27370338	-	transcript979.chr2.nic@EIF2B4	transcript979.chr2.nic	protein_coding	27370284,27369876,27369414,27369006,27368025,27367746,27366759,27364718,27364358	27370338,27369919,27369549,27369212,27368733,27367822,27367559,27364898,27364599	Gene ID= ENSG00000115211.15 TPM= 2.57 Transcript Type= NA
chr2	27364399	27370326	27364399	27370326	-	ENST00000493344.6@EIF2B4	ENST00000493344.6	protein_coding	27369876,27369414,27369006,27368654,27368372,27368025,27367746,27367457,27367074,27366759,27364718,27364399	27370326,27369549,27369212,27368733,27368463,27368139,27367822,27367559,27367201,27366936,27364898,27364599	Gene ID= ENSG00000115211.15 TPM= 2.34 Transcript Type= protein_coding
chr2	27364363	27370300	27364363	27370300	-	ENST00000622434.4@EIF2B4	ENST00000622434.4	protein_coding	27370106,27369876,27369414,27369006,27368654,27368372,27368025,27367805,27367746,27367457,27367074,27366759,27364718,27364363	27370300,27369919,27369549,27369212,27368733,27368463,27368139,27367822,27367802,27367559,27367201,27366936,27364898,27364599	Gene ID= ENSG00000115211.15 TPM= 2.57 Transcript Type= protein_coding
chr2	27370522	27377128	27370522	27377128	+	ENST00000233575.6@SNX17	ENST00000233575.6	protein_coding	27370522,27371269,27372623,27373247,27373861,27374085,27374346,27374689,27375061,27375506,27375846,27376106,27376313,27376479,27376606	27370806,27371343,27372740,27373311,27373971,27374175,27374433,27374758,27375153,27375709,27375971,27376183,27376387,27376520,27377128	Gene ID= ENSG00000115234.10 TPM= 346.89 Transcript Type= protein_coding
chr2	27370628	27377123	27370628	27377123	+	ENST00000427123.5@SNX17	ENST00000427123.5	protein_coding	27370628,27371269,27372623,27373040,27373247,27373861,27374085,27374346,27374689,27375061,27375506,27375846,27376106,27376313,27376479,27376606	27370806,27371343,27372740,27373113,27373311,27373971,27374175,27374433,27374758,27375153,27375709,27375971,27376183,27376387,27376520,27377123	Gene ID= ENSG00000115234.10 TPM= 11.27 Transcript Type= nonsense_mediated_decay
chr2	27370617	27377127	27370617	27377127	+	ENST00000440760.5@SNX17	ENST00000440760.5	protein_coding	27370617,27371269,27373247,27373861,27374085,27374346,27374689,27375061,27375506,27375846,27376106,27376313,27376479,27376606	27370806,27371468,27373311,27373971,27374175,27374433,27374758,27375153,27375709,27375971,27376183,27376387,27376520,27377127	Gene ID= ENSG00000115234.10 TPM= 2.37 Transcript Type= nonsense_mediated_decay
chr2	27377235	27380781	27377235	27380781	-	transcript1019.chr2.nnic@ZNF513	transcript1019.chr2.nnic	protein_coding	27380472,27380093,27378884,27378467,27377235	27380781,27380248,27379054,27378618,27378371	Gene ID= ENSG00000163795.13 TPM= 7.59 Transcript Type= NA
chr2	27377235	27380781	27377235	27380781	-	transcript1020.chr2.nnic@ZNF513	transcript1020.chr2.nnic	protein_coding	27380472,27380093,27378884,27378467,27377235	27380781,27380248,27379054,27378777,27378371	Gene ID= ENSG00000163795.13 TPM= 5.64 Transcript Type= NA
chr2	27377235	27380796	27377235	27380796	-	transcript1027.chr2.nic@ZNF513	transcript1027.chr2.nic	protein_coding	27380761,27380093,27378467,27377235	27380796,27380248,27379054,27378371	Gene ID= ENSG00000163795.13 TPM= 12.06 Transcript Type= NA
chr2	27377235	27380722	27377235	27380722	-	transcript1030.chr2.nic@ZNF513	transcript1030.chr2.nic	protein_coding	27378467,27377235	27380722,27378371	Gene ID= ENSG00000163795.13 TPM= 2.34 Transcript Type= NA
chr2	27377231	27380725	27377231	27380725	-	ENST00000323703.10@ZNF513	ENST00000323703.10	protein_coding	27380472,27380093,27378467,27377231	27380725,27380248,27379054,27378371	Gene ID= ENSG00000163795.13 TPM= 23.74 Transcript Type= protein_coding
chr2	27381194	27409687	27381194	27409687	-	ENST00000344034.4@PPM1G	ENST00000344034.4	protein_coding	27409303,27387089,27386194,27385747,27384673,27383952,27383366,27382476,27382126,27381194	27409687,27387158,27386279,27385879,27385088,27384092,27383600,27382605,27382228,27381805	Gene ID= ENSG00000115241.10 TPM= 185.06 Transcript Type= protein_coding
chr2	27381195	27409650	27381195	27409650	-	transcript1038.chr2.nic@PPM1G	transcript1038.chr2.nic	protein_coding	27409303,27387089,27386194,27385747,27383952,27383366,27382476,27382126,27381195	27409650,27387158,27386279,27385879,27385088,27383600,27382605,27382228,27381805	Gene ID= ENSG00000115241.10 TPM= 5.84 Transcript Type= NA
chr2	27427790	27442259	27427790	27442259	+	ENST00000233557.7@NRBP1	ENST00000233557.7	protein_coding	27427790,27428318,27433249,27433673,27433989,27434471,27434722,27435133,27436753,27437047,27437262,27439766,27440403,27440652,27440805,27441127,27441267,27441567,27441708	27428182,27428731,27433483,27433795,27434090,27434560,27434762,27435227,27436836,27437105,27437360,27439898,27440508,27440702,27440940,27441180,27441330,27441622,27442259	Gene ID= ENSG00000115216.13 TPM= 168.52 Transcript Type= protein_coding
chr2	27428640	27442255	27428640	27442255	+	ENST00000379852.7@NRBP1	ENST00000379852.7	protein_coding	27428640,27433254,27433673,27433989,27434471,27434722,27435133,27436753,27437047,27437262,27439766,27440403,27440652,27440805,27441127,27441267,27441567,27441708	27428731,27433483,27433795,27434090,27434560,27434762,27435227,27436836,27437105,27437360,27439898,27440508,27440702,27440940,27441180,27441330,27441622,27442255	Gene ID= ENSG00000115216.13 TPM= 8.56 Transcript Type= protein_coding
chr2	27442371	27444297	27442371	27444297	+	transcript1059.chr2.nic@KRTCAP3	transcript1059.chr2.nic	protein_coding	27442371,27442579,27442842,27443074,27443398,27443949,27444189	27442440,27442763,27442901,27443280,27443532,27444061,27444297	Gene ID= ENSG00000157992.12 TPM= 5.84 Transcript Type= NA
chr2	27442398	27444295	27442398	27444295	+	ENST00000453171.5@KRTCAP3	ENST00000453171.5	protein_coding	27442398,27442842,27443074,27443398,27443949,27444189	27442440,27442901,27443280,27443532,27444061,27444295	Gene ID= ENSG00000157992.12 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr2	27442381	27444297	27442381	27444297	+	ENST00000288873.7@KRTCAP3	ENST00000288873.7	protein_coding	27442381,27442579,27442842,27443074,27443398,27443949,27444186	27442440,27442763,27442901,27443280,27443532,27444061,27444297	Gene ID= ENSG00000157992.12 TPM= 15.18 Transcript Type= protein_coding
chr2	27444377	27489805	27444377	27489805	-	transcript1043.chr2.nnic@IFT172	transcript1043.chr2.nnic	protein_coding	27489615,27485360,27485018,27484227,27483872,27483580,27483289,27481046,27480026,27479509,27477995,27477559,27477217,27476641,27472250,27470928,27465746,27465411,27463097,27462701,27461759,27461269,27461015,27459709,27459378,27458779,27458126,27457841,27457639,27456511,27454567,27454354,27453982,27453630,27453384,27449998,27449691,27449499,27449294,27448915,27447812,27447515,27446260,27445929,27445745,27445296,27445014,27444377	27489805,27485503,27485130,27484266,27483937,27483659,27483376,27481260,27480149,27479604,27478156,27477612,27477320,27476726,27472362,27471029,27465882,27465518,27463181,27462793,27461836,27461517,27461093,27459829,27459522,27458868,27458223,27457976,27457755,27456653,27454660,27454418,27454162,27453739,27453513,27450096,27449800,27449562,27449380,27449031,27447922,27447634,27446355,27445988,27445843,27445449,27445105,27444521	Gene ID= ENSG00000138002.14 TPM= 3.5 Transcript Type= NA
chr2	27444377	27489805	27444377	27489805	-	transcript1045.chr2.nnic@IFT172	transcript1045.chr2.nnic	protein_coding	27489615,27485360,27485018,27484227,27483872,27483580,27483289,27481046,27480026,27479509,27477995,27477559,27477217,27476641,27472250,27470928,27463097,27462701,27461759,27461269,27461015,27459709,27459378,27458779,27457841,27457639,27454567,27453982,27453630,27453384,27449998,27449691,27449499,27449294,27448915,27447812,27447515,27446260,27445929,27445745,27445296,27445014,27444377	27489805,27485503,27485130,27484266,27483937,27483659,27483376,27481260,27480149,27479604,27478156,27477612,27477320,27476726,27472362,27471095,27463181,27462793,27461836,27461517,27461093,27459829,27459522,27458868,27458223,27457755,27454660,27454418,27453739,27453513,27450096,27449800,27449562,27449380,27449031,27447922,27447634,27446355,27445988,27445843,27445449,27445105,27444521	Gene ID= ENSG00000138002.14 TPM= 2.34 Transcript Type= NA
chr2	27444371	27489757	27444371	27489757	-	ENST00000260570.7@IFT172	ENST00000260570.7	protein_coding	27489615,27485360,27485018,27484227,27483872,27483580,27483289,27481046,27480026,27479509,27477995,27477559,27477217,27476641,27472250,27470928,27465746,27465411,27463097,27462701,27461759,27461269,27461015,27459709,27459378,27458779,27458126,27457841,27457639,27456511,27454567,27454354,27453982,27453630,27453384,27449998,27449691,27449499,27449294,27448915,27447812,27447515,27446260,27445929,27445745,27445296,27445014,27444371	27489757,27485503,27485130,27484266,27483937,27483659,27483376,27481260,27480149,27479604,27478156,27477612,27477320,27476726,27472362,27471095,27465882,27465518,27463181,27462793,27461836,27461517,27461093,27459829,27459522,27458868,27458223,27457976,27457755,27456653,27454660,27454418,27454162,27453739,27453513,27450096,27449800,27449562,27449380,27449031,27447922,27447634,27446355,27445988,27445843,27445449,27445105,27444521	Gene ID= ENSG00000138002.14 TPM= 10.51 Transcript Type= protein_coding
chr2	27491883	27495245	27491883	27495245	-	ENST00000264703.3@FNDC4	ENST00000264703.3	protein_coding	27494878,27494547,27494351,27493930,27493389,27492666,27491883	27495245,27494703,27494466,27494134,27493478,27492790,27492478	Gene ID= ENSG00000115226.9 TPM= 10.51 Transcript Type= protein_coding
chr2	27583030	27623215	27583030	27623215	+	ENST00000355467.5@ZNF512	ENST00000355467.5	protein_coding	27583030,27583658,27598067,27599583,27599970,27600691,27601356,27602463,27603140,27607845,27615168,27616262,27617473,27621153	27583142,27583716,27598254,27599678,27600053,27600815,27601442,27602561,27603307,27608039,27615269,27616324,27617571,27623215	Gene ID= ENSG00000243943.9 TPM= 14.3 Transcript Type= protein_coding
chr2	27582969	27623215	27582969	27623215	+	ENST00000556601.5@ZNF512	ENST00000556601.5	protein_coding	27582969,27598067,27599583,27599970,27600691,27601356,27602463,27603140,27607845,27615168,27616262,27617473,27621153	27583142,27598254,27599678,27600053,27600815,27601442,27602561,27603307,27608039,27615269,27616324,27617571,27623215	Gene ID= ENSG00000243943.9 TPM= 11.97 Transcript Type= protein_coding
chr2	27583064	27623094	27583064	27623094	+	transcript1079.chr2.nic@ZNF512	transcript1079.chr2.nic	protein_coding	27583064,27598067,27599583,27599970,27600691,27601356,27602463,27603140,27607845,27615168,27616262,27617473,27621153	27583716,27598254,27599678,27600053,27600815,27601442,27602561,27603307,27608039,27615269,27616324,27617571,27623094	Gene ID= ENSG00000243943.9 TPM= 8.47 Transcript Type= NA
chr2	27583030	27623094	27583030	27623094	+	ENST00000379717.5@ZNF512	ENST00000379717.5	protein_coding	27583030,27583658,27598070,27599583,27599970,27600691,27601356,27602463,27603140,27607845,27615168,27616262,27617473,27621153	27583142,27583716,27598254,27599678,27600053,27600815,27601442,27602561,27603307,27608039,27615269,27616324,27617571,27623094	Gene ID= ENSG00000243943.9 TPM= 17.81 Transcript Type= protein_coding
chr2	27618001	27623092	27618001	27623092	+	transcript1081.chr2.nnic@NA	transcript1081.chr2.nnic	NA	27618001	27623092	Gene ID= novel_gene_chr2_1082 TPM= 2.34 Transcript Type= NA
chr2	27625639	27629012	27625639	27629012	-	ENST00000324364.3@CCDC121	ENST00000324364.3	protein_coding	27628950,27625639	27629012,27627917	Gene ID= ENSG00000176714.9 TPM= 2.34 Transcript Type= protein_coding
chr2	27628996	27651508	27628996	27651508	+	ENST00000264718.7@GPN1	ENST00000264718.7	protein_coding	27628996,27629859,27631027,27631834,27632633,27634846,27635140,27638210,27638885,27640043,27641240,27642429,27647836,27650115	27629169,27629952,27631066,27631900,27632670,27634924,27635234,27638255,27639031,27640125,27641279,27642519,27647943,27651508	Gene ID= ENSG00000198522.13 TPM= 57.8 Transcript Type= protein_coding
chr2	27629037	27651508	27629037	27651508	+	transcript1097.chr2.nic@GPN1	transcript1097.chr2.nic	protein_coding	27629037,27629859,27632633,27634846,27635140,27638210,27638885,27640043,27641240,27642429,27647836,27650115	27629169,27629952,27632670,27634924,27635234,27638255,27639031,27640125,27641279,27642519,27647943,27651508	Gene ID= ENSG00000198522.13 TPM= 4.09 Transcript Type= NA
chr2	27650812	27663809	27650812	27663809	-	ENST00000337768.9@SUPT7L	ENST00000337768.9	protein_coding	27663329,27662179,27660984,27657345,27655365,27650812	27663809,27662281,27661388,27657669,27655602,27653747	Gene ID= ENSG00000119760.15 TPM= 11.68 Transcript Type= protein_coding
chr2	27653052	27663640	27653052	27663640	-	ENST00000406540.5@SUPT7L	ENST00000406540.5	protein_coding	27663329,27660984,27657345,27655365,27653052	27663640,27662281,27657669,27655602,27653747	Gene ID= ENSG00000119760.15 TPM= 9.34 Transcript Type= protein_coding
chr2	27663434	27694969	27663434	27694969	+	transcript1094.chr2.nic@SLC4A1AP	transcript1094.chr2.nic	protein_coding	27663434,27665100,27667268,27668843,27669248,27675532,27677295,27677738,27682248,27685037,27687934,27693685,27694634	27664577,27665295,27667390,27668903,27669387,27675692,27677364,27677924,27682359,27685277,27688767,27693754,27694969	Gene ID= ENSG00000163798.13 TPM= 5.84 Transcript Type= NA
chr2	27771717	27779734	27771717	27779734	+	ENST00000379666.7@MRPL33	ENST00000379666.7	protein_coding	27771717,27772674,27779433	27771799,27772692,27779734	Gene ID= ENSG00000243147.7 TPM= 40.87 Transcript Type= protein_coding
chr2	27771717	27779741	27771717	27779741	+	ENST00000296102.7@MRPL33	ENST00000296102.7	protein_coding	27771717,27772674,27774424,27779433	27771799,27772692,27774530,27779741	Gene ID= ENSG00000243147.7 TPM= 38.53 Transcript Type= protein_coding
chr2	27775352	27777854	27775352	27777854	-	transcript1118.chr2.nnic@NA	transcript1118.chr2.nnic	NA	27775352	27777854	Gene ID= novel_gene_chr2_1119 TPM= 3.5 Transcript Type= NA
chr2	27781364	27891098	27781364	27891098	-	ENST00000302188.7@RBKS	ENST00000302188.7	protein_coding	27890257,27858439,27848034,27847042,27843067,27832686,27827567,27781364	27891098,27858571,27848097,27847104,27843231,27832777,27827755,27781788	Gene ID= ENSG00000171174.13 TPM= 1.17 Transcript Type= protein_coding
chr2	27890750	28338901	27890750	28338901	+	ENST00000379624.5@BABAM2	ENST00000379624.5	protein_coding	27890750,27894533,27929832,27987993,28025226,28045725,28129271,28237202,28241323,28244780,28298338,28338450	27890842,27894684,27929908,27988087,28025420,28045799,28129380,28237301,28241393,28244862,28298491,28338901	Gene ID= ENSG00000158019.20 TPM= 15.18 Transcript Type= protein_coding
chr2	27890729	28338901	27890729	28338901	+	ENST00000344773.6@BABAM2	ENST00000344773.6	protein_coding	27890729,27894533,27929832,27987993,28025226,28045725,28129271,28237202,28241323,28244780,28298338,28327274,28338450	27890842,27894684,27929908,27988087,28025420,28045799,28129380,28237301,28241393,28244862,28298491,28327447,28338901	Gene ID= ENSG00000158019.20 TPM= 4.67 Transcript Type= protein_coding
chr2	27890793	28338901	27890793	28338901	+	ENST00000361704.6@BABAM2	ENST00000361704.6	protein_coding	27890793,27894533,27929832,27987993,28025226,28045725,28129271,28237202,28241323,28244780,28298338,28310082,28338450	27890842,27894684,27929908,27988087,28025420,28045799,28129380,28237301,28241393,28244862,28298491,28310153,28338901	Gene ID= ENSG00000158019.20 TPM= 2.34 Transcript Type= protein_coding
chr2	28392858	28412971	28392858	28412971	+	transcript1128.chr2.nnic@FOSL2	transcript1128.chr2.nnic	protein_coding	28392858,28404107,28408759,28410473,28411930	28393822,28404358,28408866,28410575,28412971	Gene ID= ENSG00000075426.11 TPM= 5.84 Transcript Type= NA
chr2	28392858	28417312	28392858	28417312	+	ENST00000264716.8@FOSL2	ENST00000264716.8	protein_coding	28392858,28404107,28408759,28411930	28393822,28404358,28408866,28417312	Gene ID= ENSG00000075426.11 TPM= 68.89 Transcript Type= protein_coding
chr2	28416951	28420843	28416951	28420843	-	transcript1145.chr2.nnic@NA	transcript1145.chr2.nnic	NA	28416951	28420843	Gene ID= novel_gene_chr2_1146 TPM= 21.02 Transcript Type= NA
chr2	28426277	28429196	28426277	28429196	+	transcript1147.chr2.nnic@NA	transcript1147.chr2.nnic	NA	28426277	28429196	Gene ID= novel_gene_chr2_1148 TPM= 2.34 Transcript Type= NA
chr2	28751748	28802930	28751748	28802930	+	ENST00000358506.6@PPP1CB	ENST00000358506.6	protein_coding	28751748,28752038,28776851,28778809,28781738,28783907,28788658,28793863,28799199	28751820,28752176,28776982,28779039,28781842,28783978,28788809,28793997,28802930	Gene ID= ENSG00000213639.9 TPM= 20.43 Transcript Type= protein_coding
chr2	28751853	28802940	28751853	28802940	+	ENST00000395366.2@PPP1CB	ENST00000395366.2	protein_coding	28751853,28776851,28778809,28781738,28783907,28788658,28793863,28799199	28752176,28776982,28779039,28781842,28783978,28788809,28793997,28802940	Gene ID= ENSG00000213639.9 TPM= 57.8 Transcript Type= protein_coding
chr2	28849821	28870301	28849821	28870301	-	ENST00000306108.9@TRMT61B	ENST00000306108.9	protein_coding	28869579,28865017,28861118,28852408,28851072,28850328,28849821	28870301,28865119,28861308,28852499,28851298,28850405,28850242	Gene ID= ENSG00000171103.10 TPM= 23.35 Transcript Type= protein_coding
chr2	28849821	28870296	28849821	28870296	-	transcript1173.chr2.nnic@TRMT61B	transcript1173.chr2.nnic	protein_coding	28869560,28861118,28852408,28851072,28850328,28849821	28870296,28861308,28852499,28851298,28850405,28850242	Gene ID= ENSG00000171103.10 TPM= 2.34 Transcript Type= NA
chr2	28894648	28948222	28894648	28948222	+	transcript1176.chr2.nnic@WDR43	transcript1176.chr2.nnic	protein_coding	28894648,28901987,28906460,28912590,28914069,28917893,28922919,28924982,28926468,28927569,28929579,28930058,28935521,28936922,28937931,28941461,28942312,28946450,28946600	28894923,28902124,28906581,28912710,28914208,28917995,28922983,28925153,28926554,28927700,28929710,28930149,28935607,28936953,28937994,28941574,28942381,28946499,28948222	Gene ID= ENSG00000163811.11 TPM= 2.34 Transcript Type= NA
chr2	28894643	28948222	28894643	28948222	+	ENST00000407426.7@WDR43	ENST00000407426.7	protein_coding	28894643,28901987,28906460,28912590,28914069,28917893,28922919,28924982,28926468,28927569,28929579,28935521,28936922,28937931,28941461,28942312,28946450,28946600	28894923,28902124,28906581,28912710,28914208,28917995,28922983,28925153,28926554,28927700,28929710,28935607,28936953,28937994,28941574,28942381,28946499,28948222	Gene ID= ENSG00000163811.11 TPM= 38.53 Transcript Type= protein_coding
chr2	29024473	29052230	29024473	29052230	+	transcript1188.chr2.nic@TOGARAM2	transcript1188.chr2.nic	protein_coding	29024473,29032934,29033469,29035464,29036541,29045324,29051756	29027011,29033051,29033563,29035656,29036757,29045410,29052230	Gene ID= ENSG00000189350.12 TPM= 3.5 Transcript Type= NA
chr2	29113996	29181923	29113996	29181923	+	ENST00000404424.5@CLIP4	ENST00000404424.5	protein_coding	29113996,29121374,29131258,29132152,29133655,29135548,29143709,29145232,29152685,29156354,29157204,29160333,29163831,29167476,29174373,29181572	29114312,29121521,29131397,29132245,29133816,29135666,29143945,29145367,29152828,29156443,29157347,29160467,29163954,29167540,29174445,29181923	Gene ID= ENSG00000115295.19 TPM= 1.55 Transcript Type= protein_coding
chr2	29115367	29159707	29115367	29159707	+	transcript1209.chr2.nic@CLIP4	transcript1209.chr2.nic	protein_coding	29115367,29121374,29131258,29132152,29133655,29135548,29143709,29145232,29152685,29156354,29157204	29115665,29121521,29131397,29132245,29133816,29135666,29143945,29145367,29152828,29156443,29159707	Gene ID= ENSG00000115295.19 TPM= 15.56 Transcript Type= NA
chr2	29115426	29183813	29115426	29183813	+	ENST00000320081.9@CLIP4	ENST00000320081.9	protein_coding	29115426,29121374,29131258,29132152,29133655,29135548,29143709,29145232,29152685,29156354,29157204,29160333,29163831,29167476,29174373,29181572	29115665,29121521,29131397,29132245,29133816,29135666,29143945,29145367,29152828,29156443,29157347,29160467,29163954,29167540,29174445,29183813	Gene ID= ENSG00000115295.19 TPM= 77.45 Transcript Type= protein_coding
chr2	30146892	30159550	30146892	30159550	+	transcript1220.chr2.nnic@YPEL5	transcript1220.chr2.nnic	protein_coding	30146892,30158619	30147062,30159550	Gene ID= ENSG00000119801.12 TPM= 3.5 Transcript Type= NA
chr2	30146961	30160533	30146961	30160533	+	ENST00000261353.8@YPEL5	ENST00000261353.8	protein_coding	30146961,30156628,30158619	30147062,30156792,30160533	Gene ID= ENSG00000119801.12 TPM= 95.45 Transcript Type= protein_coding
chr2	30146941	30160533	30146941	30160533	+	ENST00000379519.7@YPEL5	ENST00000379519.7	protein_coding	30146941,30148245,30156628,30158619	30147062,30148541,30156792,30160533	Gene ID= ENSG00000119801.12 TPM= 7.88 Transcript Type= protein_coding
chr2	30146941	30160533	30146941	30160533	+	ENST00000379520.7@YPEL5	ENST00000379520.7	protein_coding	30146941,30148245,30155850,30156628,30158619	30147062,30148541,30155910,30156792,30160533	Gene ID= ENSG00000119801.12 TPM= 2.04 Transcript Type= protein_coding
chr2	30147007	30160533	30147007	30160533	+	ENST00000402003.7@YPEL5	ENST00000402003.7	protein_coding	30147007,30148245,30156628,30158619	30147062,30148305,30156792,30160533	Gene ID= ENSG00000119801.12 TPM= 2.04 Transcript Type= protein_coding
chr2	30231531	30260028	30231531	30260028	+	ENST00000395323.7@LBH	ENST00000395323.7	protein_coding	30231531,30234405,30257433	30231764,30234507,30260028	Gene ID= ENSG00000213626.11 TPM= 485.72 Transcript Type= protein_coding
chr2	30231537	30256701	30231537	30256701	+	ENST00000464412.5@LBH	ENST00000464412.5	protein_coding	30231537,30234405,30256539	30231764,30234507,30256701	Gene ID= ENSG00000213626.11 TPM= 2.34 Transcript Type= processed_transcript
chr2	30346546	30361010	30346546	30361010	+	transcript1239.chr2.nnic@LINC01936	transcript1239.chr2.nnic	lincRNA	30346546,30349937,30359468	30347115,30350146,30361010	Gene ID= ENSG00000235997.2 TPM= 5.84 Transcript Type= NA
chr2	30346667	30352431	30346667	30352431	+	transcript1240.chr2.nnic@LINC01936	transcript1240.chr2.nnic	lincRNA	30346667,30349937,30350925	30347115,30350158,30352431	Gene ID= ENSG00000235997.2 TPM= 2.34 Transcript Type= NA
chr2	30346659	30352431	30346659	30352431	+	ENST00000421976.2@LINC01936	ENST00000421976.2	lincRNA	30346659,30349937	30347115,30352431	Gene ID= ENSG00000235997.2 TPM= 8.17 Transcript Type= lincRNA
chr2	30447236	30644224	30447236	30644224	+	ENST00000379509.7@LCLAT1	ENST00000379509.7	protein_coding	30447236,30525587,30533116,30562146,30568060,30640117	30447383,30525755,30533314,30562292,30568176,30644224	Gene ID= ENSG00000172954.13 TPM= 26.85 Transcript Type= protein_coding
chr2	30729703	30807458	30729703	30807458	-	transcript1252.chr2.nic@CAPN13	transcript1252.chr2.nic	protein_coding	30807302,30787128,30777567,30775930,30770313,30764132,30763082,30758046,30754290,30753053,30751103,30745723,30743383,30742326,30741908,30738400,30738235,30736503,30734449,30732438,30731344,30730730,30729703	30807458,30787357,30777639,30776045,30770449,30764306,30763156,30758137,30754364,30753198,30751251,30745734,30743579,30742359,30741964,30738457,30738293,30736571,30734524,30732566,30731399,30730786,30729886	Gene ID= ENSG00000162949.16 TPM= 2.34 Transcript Type= NA
chr2	30722771	30807446	30722771	30807446	-	ENST00000295055.12@CAPN13	ENST00000295055.12	protein_coding	30807302,30787128,30777567,30775930,30770313,30764132,30763082,30758046,30754290,30753053,30751103,30745723,30743383,30742326,30741908,30738400,30738235,30736503,30734449,30732438,30731344,30730730,30722771	30807446,30787357,30777639,30776045,30770449,30764306,30763156,30758137,30754364,30753198,30751251,30745734,30743579,30742359,30741964,30738457,30738293,30736571,30734524,30732566,30731399,30730786,30723236	Gene ID= ENSG00000162949.16 TPM= 17.51 Transcript Type= protein_coding
chr2	31234152	31269447	31234152	31269447	+	transcript1259.chr2.nnic@EHD3	transcript1259.chr2.nnic	protein_coding	31234152,31244274,31249371,31254837,31260510,31261549,31266177	31234848,31244450,31249468,31254991,31260922,31261713,31269447	Gene ID= ENSG00000013016.15 TPM= 9.34 Transcript Type= NA
chr2	32002520	32006604	32002520	32006604	+	transcript1278.chr2.nnic@NA	transcript1278.chr2.nnic	NA	32002520	32006604	Gene ID= novel_gene_chr2_1279 TPM= 2.34 Transcript Type= NA
chr2	32011907	32039793	32011907	32039793	-	ENST00000414013.5@DPY30	ENST00000414013.5	protein_coding	32039733,32039421,32039279,32029594,32023422,32011907	32039793,32039492,32039326,32029736,32023474,32012052	Gene ID= ENSG00000162961.13 TPM= 2.34 Transcript Type= processed_transcript
chr2	32023892	32039812	32023892	32039812	-	ENST00000342166.9@DPY30	ENST00000342166.9	protein_coding	32039733,32039421,32039279,32029594,32023892	32039812,32039492,32039326,32029736,32024256	Gene ID= ENSG00000162961.13 TPM= 24.52 Transcript Type= protein_coding
chr2	32165864	32224379	32165864	32224379	+	ENST00000282587.9@SLC30A6	ENST00000282587.9	protein_coding	32165864,32171287,32174063,32175319,32184273,32192336,32192918,32193889,32197344,32197707,32204590,32206886,32209493,32220213	32165903,32171373,32174147,32175361,32184338,32192416,32192953,32193983,32197392,32197826,32204692,32206933,32209561,32224379	Gene ID= ENSG00000152683.14 TPM= 2.34 Transcript Type= protein_coding
chr2	32165841	32224112	32165841	32224112	+	ENST00000435660.5@SLC30A6	ENST00000435660.5	protein_coding	32165841,32171287,32174063,32175319,32184273,32192336,32192918,32193889,32197344,32197707,32204590,32206886,32220213	32165903,32171373,32174147,32175361,32184338,32192416,32192953,32193983,32197392,32197826,32204692,32206933,32224112	Gene ID= ENSG00000152683.14 TPM= 1.17 Transcript Type= protein_coding
chr2	32224454	32264880	32224454	32264880	-	ENST00000402280.5@NLRC4	ENST00000402280.5	protein_coding	32264738,32256775,32252419,32249607,32241033,32238132,32236247,32235401,32224454	32264880,32256893,32252679,32251601,32241125,32238302,32236339,32235568,32224765	Gene ID= ENSG00000091106.18 TPM= 5.25 Transcript Type= protein_coding
chr2	32224453	32265732	32224453	32265732	-	ENST00000360906.9@NLRC4	ENST00000360906.9	protein_coding	32265587,32256775,32252419,32249607,32241033,32238132,32236247,32235401,32224453	32265732,32256893,32252679,32251601,32241125,32238302,32236339,32235568,32224765	Gene ID= ENSG00000091106.18 TPM= 4.09 Transcript Type= protein_coding
chr2	32308896	32311725	32308896	32311725	+	transcript1315.chr2.nnic@NA	transcript1315.chr2.nnic	NA	32308896	32311725	Gene ID= novel_gene_chr2_1316 TPM= 7.01 Transcript Type= NA
chr2	32355872	32357940	32355872	32357940	-	transcript1323.chr2.nnic@NA	transcript1323.chr2.nnic	NA	32355872	32357940	Gene ID= novel_gene_chr2_1324 TPM= 2.34 Transcript Type= NA
chr2	32628062	32821051	32628062	32821051	+	ENST00000317907.8@TTC27	ENST00000317907.8	protein_coding	32628062,32630523,32633876,32640270,32650131,32664303,32666635,32672272,32678856,32702807,32733828,32736694,32758292,32777882,32782626,32786984,32811024,32812504,32817457,32820816	32628380,32630700,32634005,32640410,32650233,32664467,32666768,32672384,32678922,32702920,32733923,32736816,32758519,32777980,32782678,32787149,32811221,32812615,32817557,32821051	Gene ID= ENSG00000018699.11 TPM= 8.17 Transcript Type= protein_coding
chr2	32723973	32727013	32723973	32727013	-	transcript1330.chr2.nnic@NA	transcript1330.chr2.nnic	NA	32723973	32727013	Gene ID= novel_gene_chr2_1331 TPM= 4.67 Transcript Type= NA
chr2	33134639	33399509	33134639	33399509	+	ENST00000404525.5@LTBP1	ENST00000404525.5	protein_coding	33134639,33186856,33188577,33217552,33222080,33243662,33252677,33257443,33259588,33262722,33263294,33273656,33274965,33275801,33280039,33293160,33300451,33301522,33309434,33315144,33342838,33347367,33360597,33361429,33363390,33364216,33365333,33389184,33397133,33398364	33134960,33187080,33188851,33217654,33222151,33243784,33252844,33257511,33259610,33262821,33263392,33273781,33275090,33275923,33280158,33293282,33300573,33301644,33309556,33315269,33342963,33347510,33360779,33361515,33363518,33364356,33365503,33389306,33397282,33399509	Gene ID= ENSG00000049323.15 TPM= 4.67 Transcript Type= protein_coding
chr2	33436324	33564750	33436324	33564750	+	ENST00000402538.7@RASGRP3	ENST00000402538.7	protein_coding	33436324,33447820,33511710,33515010,33516542,33519952,33520553,33521955,33523879,33524432,33527137,33534323,33539094,33543512,33549604,33555531,33558211,33558672,33562729	33436591,33447943,33511842,33515206,33516644,33520014,33520684,33522102,33524052,33524548,33527412,33534400,33539210,33543627,33549751,33555567,33558336,33559030,33564750	Gene ID= ENSG00000152689.17 TPM= 1.17 Transcript Type= protein_coding
chr2	33476228	33564731	33476228	33564731	+	ENST00000403687.7@RASGRP3	ENST00000403687.7	protein_coding	33476228,33511710,33515010,33516542,33519952,33520553,33521955,33523879,33524432,33527137,33534323,33539094,33543512,33549604,33555531,33558211,33558672,33562729	33476707,33511842,33515206,33516644,33520014,33520684,33522102,33524052,33524548,33527412,33534400,33539210,33543627,33549751,33555567,33558336,33559030,33564731	Gene ID= ENSG00000152689.17 TPM= 3.5 Transcript Type= protein_coding
chr2	33583658	33599362	33583658	33599362	-	ENST00000238823.12@FAM98A	ENST00000238823.12	protein_coding	33599169,33595489,33592080,33588335,33587240,33586562,33585530,33583658	33599362,33595637,33592214,33588519,33587320,33586678,33585697,33585444	Gene ID= ENSG00000119812.18 TPM= 26.85 Transcript Type= protein_coding
chr2	36354748	36355529	36354748	36355529	-	transcript1353.chr2.nnic@NA	transcript1353.chr2.nnic	NA	36354748	36355529	Gene ID= novel_gene_chr2_1354 TPM= 2.34 Transcript Type= NA
chr2	36355736	36499520	36355736	36499520	+	transcript1369.chr2.nic@CRIM1	transcript1369.chr2.nic	protein_coding	36355736,36396614,36441258,36442615,36464534,36476889,36479497,36499219	36356623,36396787,36441500,36442735,36464655,36477071,36479694,36499520	Gene ID= ENSG00000150938.9 TPM= 5.84 Transcript Type= NA
chr2	36552258	36598191	36552258	36598191	-	ENST00000379245.8@FEZ2	ENST00000379245.8	protein_coding	36597877,36590903,36583353,36581290,36578597,36560785,36558438,36555683,36552258	36598191,36591011,36583469,36581431,36578865,36560865,36558513,36555748,36553179	Gene ID= ENSG00000171055.14 TPM= 1.17 Transcript Type= protein_coding
chr2	36552294	36598142	36552294	36598142	-	ENST00000405912.7@FEZ2	ENST00000405912.7	protein_coding	36597877,36590903,36583353,36581290,36578597,36558438,36555683,36552294	36598142,36591011,36583469,36581431,36578865,36558513,36555748,36553179	Gene ID= ENSG00000171055.14 TPM= 12.84 Transcript Type= protein_coding
chr2	36981009	37084384	36981009	37084384	-	transcript1384.chr2.nnic@HEATR5B	transcript1384.chr2.nnic	protein_coding	37084269,37083289,37079120,37076911,37075485,37072110,37070230,37068681,37065755,37064740,37061939,37060615,37058888,37058451,37057317,37056440,37053502,37049653,37041133,37040329,37037855,37032629,37028681,37027923,37020655,37019809,37013841,37008611,37007050,37005632,37003542,37002306,37000586,36990648,36988646,36981009	37084384,37083436,37079331,37077019,37075634,37072281,37070387,37068930,37065910,37064990,37062050,37060733,37058987,37058560,37057480,37056615,37053607,37049843,37041292,37040518,37038024,37032773,37028920,37028174,37020836,37019877,37014020,37008848,37007304,37005759,37003686,37002572,37000813,36990799,36988859,36981794	Gene ID= ENSG00000008869.11 TPM= 8.17 Transcript Type= NA
chr2	37082053	37084384	37082053	37084384	-	transcript1391.chr2.nic@HEATR5B	transcript1391.chr2.nic	protein_coding	37084269,37082053	37084384,37083436	Gene ID= ENSG00000008869.11 TPM= 3.5 Transcript Type= NA
chr2	37084451	37099244	37084451	37099244	+	ENST00000409774.5@GPATCH11	ENST00000409774.5	protein_coding	37084451,37088369,37089640,37090681,37091916,37092165,37094082,37095437,37096208	37084570,37088440,37089866,37090722,37092036,37092255,37094195,37095518,37099244	Gene ID= ENSG00000152133.14 TPM= 24.52 Transcript Type= protein_coding
chr2	37084518	37099244	37084518	37099244	+	ENST00000281932.5@GPATCH11	ENST00000281932.5	protein_coding	37084518,37088369,37091916,37092165,37094082,37095437,37096208	37084570,37088440,37092036,37092255,37094195,37095518,37099244	Gene ID= ENSG00000152133.14 TPM= 4.67 Transcript Type= protein_coding
chr2	37104699	37156964	37104699	37156964	-	transcript1393.chr2.nnic@EIF2AK2	transcript1393.chr2.nnic	protein_coding	37156920,37148857,37147688,37146853,37141553,37139631,37138509,37138270,37136983,37135484,37126289,37122506,37119959,37114731,37109194,37107474,37104699	37156964,37149026,37147822,37146973,37141701,37139757,37138585,37138363,37137017,37135546,37126411,37122664,37120139,37114859,37109295,37107527,37107395	Gene ID= ENSG00000055332.16 TPM= 11.68 Transcript Type= NA
chr2	37106503	37157012	37106503	37157012	-	transcript1395.chr2.nic@EIF2AK2	transcript1395.chr2.nic	protein_coding	37156908,37148857,37147688,37146853,37141553,37139631,37138509,37138270,37136983,37135484,37126289,37122506,37119959,37114731,37109194,37107474,37106503	37157012,37148939,37147822,37146973,37141701,37139757,37138585,37138363,37137017,37135546,37126411,37122664,37120139,37114859,37109295,37107527,37107395	Gene ID= ENSG00000055332.16 TPM= 4.67 Transcript Type= NA
chr2	37106569	37157113	37106569	37157113	-	transcript1400.chr2.nnic@EIF2AK2	transcript1400.chr2.nnic	protein_coding	37156917,37148857,37147688,37146853,37141553,37139631,37138509,37138270,37136983,37135484,37126289,37122506,37119959,37114731,37109194,37107474,37106569	37157113,37148939,37147822,37146973,37141701,37139757,37138585,37138363,37137017,37135546,37126411,37122664,37120139,37114859,37109295,37107527,37107395	Gene ID= ENSG00000055332.16 TPM= 2.34 Transcript Type= NA
chr2	37196470	37204741	37196470	37204741	+	transcript1428.chr2.nnic@CEBPZOS	transcript1428.chr2.nnic	protein_coding	37196470,37199704,37201048,37201642,37201863,37202706	37196520,37199819,37201092,37201726,37202657,37204741	Gene ID= ENSG00000218739.9 TPM= 7.01 Transcript Type= NA
chr2	37196488	37204741	37196488	37204741	+	ENST00000402297.5@CEBPZOS	ENST00000402297.5	protein_coding	37196488,37199704,37201048,37201642,37201863	37196520,37199819,37201092,37201726,37204741	Gene ID= ENSG00000218739.9 TPM= 14.01 Transcript Type= protein_coding
chr2	37201612	37231713	37201612	37231713	-	ENST00000234170.9@CEBPZ	ENST00000234170.9	protein_coding	37231412,37227544,37223170,37222380,37220385,37216984,37216316,37216140,37214886,37213864,37212335,37211843,37210999,37202950,37202784,37201612	37231713,37229036,37223401,37222563,37220473,37217037,37216418,37216208,37214952,37213961,37212392,37212039,37211082,37203008,37202865,37201903	Gene ID= ENSG00000115816.14 TPM= 52.54 Transcript Type= protein_coding
chr2	37231666	37249160	37231666	37249160	+	ENST00000002125.8@NDUFAF7	ENST00000002125.8	protein_coding	37231666,37232106,37236096,37237757,37241578,37242635,37243863,37246052,37247456,37248135	37231760,37232266,37236176,37237867,37241791,37242693,37243973,37246195,37247629,37249160	Gene ID= ENSG00000003509.15 TPM= 8.17 Transcript Type= protein_coding
chr2	37250502	37324808	37250502	37324808	-	transcript1440.chr2.nnic@PRKD3	transcript1440.chr2.nnic	protein_coding	37324681,37316237,37293133,37290868,37289356,37286177,37282542,37279746,37277866,37275767,37274421,37272380,37269615,37267430,37260223,37259583,37256662,37254204,37250502	37324808,37317179,37293271,37290999,37289513,37286369,37282619,37279929,37277989,37275844,37274697,37272432,37269687,37267536,37260384,37259681,37256929,37254289,37253350	Gene ID= ENSG00000115825.9 TPM= 7.01 Transcript Type= NA
chr2	37250708	37324832	37250708	37324832	-	transcript1447.chr2.nic@PRKD3	transcript1447.chr2.nic	protein_coding	37324681,37293133,37290868,37289356,37286177,37282542,37279746,37277866,37275767,37274421,37272380,37269615,37267430,37260223,37259583,37256662,37254204,37250708	37324832,37293271,37290999,37289513,37286369,37282619,37279929,37277989,37275844,37274697,37272432,37269687,37267536,37260384,37259681,37256929,37254289,37253350	Gene ID= ENSG00000115825.9 TPM= 4.67 Transcript Type= NA
chr2	37344574	37373322	37344574	37373322	+	ENST00000338415.7@QPCT	ENST00000338415.7	protein_coding	37344574,37352789,37359580,37367232,37369685,37372356,37372682	37344851,37352935,37359858,37367408,37369784,37372472,37373322	Gene ID= ENSG00000115828.15 TPM= 17.51 Transcript Type= protein_coding
chr2	38069913	38162831	38069913	38162831	-	transcript1490.chr2.nnic@CYP1B1	transcript1490.chr2.nnic	protein_coding	38162816,38074346,38069913	38162831,38075483,38071310	Gene ID= ENSG00000138061.11 TPM= 8.17 Transcript Type= NA
chr2	38067507	38076181	38067507	38076181	-	ENST00000610745.4@CYP1B1	ENST00000610745.4	protein_coding	38075780,38074346,38067507	38076181,38075389,38071310	Gene ID= ENSG00000138061.11 TPM= 38.53 Transcript Type= protein_coding
chr2	38294885	38377288	38294885	38377288	-	transcript1502.chr2.nic@ATL2	transcript1502.chr2.nic	protein_coding	38377143,38343268,38318885,38318535,38315284,38314608,38313151,38310309,38309379,38300272,38299256,38294885	38377288,38343512,38319019,38318639,38315334,38314664,38313243,38310447,38309506,38300328,38299327,38298575	Gene ID= ENSG00000119787.13 TPM= 8.17 Transcript Type= NA
chr2	38294880	38377262	38294880	38377262	-	ENST00000378954.8@ATL2	ENST00000378954.8	protein_coding	38377143,38343268,38318885,38318535,38315284,38314608,38313151,38310309,38309379,38300272,38299256,38298144,38294880	38377262,38343512,38319019,38318639,38315334,38314664,38313243,38310447,38309506,38300328,38299327,38298575,38296113	Gene ID= ENSG00000119787.13 TPM= 17.51 Transcript Type= protein_coding
chr2	38563184	38602920	38563184	38602920	-	transcript1505.chr2.nnic@HNRNPLL	transcript1505.chr2.nnic	protein_coding	38602438,38591530,38585644,38583841,38582072,38581913,38577920,38577461,38573210,38569804,38569133,38568386,38568199,38566109,38563184	38602920,38591648,38585881,38583926,38582168,38581985,38578002,38577532,38573427,38569925,38569334,38568443,38568297,38566200,38564237	Gene ID= ENSG00000143889.15 TPM= 2.34 Transcript Type= NA
chr2	38579104	38602908	38579104	38602908	-	transcript1536.chr2.nic@HNRNPLL	transcript1536.chr2.nic	protein_coding	38602438,38591530,38585644,38583841,38582072,38579104	38602908,38591648,38585881,38583926,38582168,38581985	Gene ID= ENSG00000143889.15 TPM= 3.5 Transcript Type= NA
chr2	38665910	38734768	38665910	38734768	+	ENST00000272252.9@GALM	ENST00000272252.9	protein_coding	38665910,38675912,38681280,38689813,38729556,38731735,38733488	38666351,38676066,38681486,38689894,38729697,38731909,38734768	Gene ID= ENSG00000143891.16 TPM= 44.37 Transcript Type= protein_coding
chr2	38744893	38751359	38744893	38751359	-	transcript1543.chr2.nnic@SRSF7	transcript1543.chr2.nnic	protein_coding	38751229,38750014,38749529,38749240,38748579,38748047,38746694,38746144,38744893	38751359,38750194,38749705,38749346,38748653,38748157,38746747,38746179,38745187	Gene ID= ENSG00000115875.18 TPM= 2.92 Transcript Type= NA
chr2	38743599	38751494	38743599	38751494	-	ENST00000313117.10@SRSF7	ENST00000313117.10	protein_coding	38751229,38750014,38749529,38748579,38748047,38746694,38746144,38743599	38751494,38750194,38749705,38748653,38748157,38746747,38746179,38745187	Gene ID= ENSG00000115875.18 TPM= 5.84 Transcript Type= protein_coding
chr2	38743599	38751494	38743599	38751494	-	ENST00000446327.6@SRSF7	ENST00000446327.6	protein_coding	38751229,38750014,38749529,38748579,38748047,38746694,38743599	38751494,38750194,38749705,38748653,38748157,38746747,38745187	Gene ID= ENSG00000115875.18 TPM= 1.17 Transcript Type= protein_coding
chr2	38744894	38751359	38744894	38751359	-	transcript1553.chr2.nic@SRSF7	transcript1553.chr2.nic	protein_coding	38751229,38750014,38748579,38748047,38746694,38744894	38751359,38750194,38749705,38748157,38746747,38745187	Gene ID= ENSG00000115875.18 TPM= 3.5 Transcript Type= NA
chr2	38744893	38751358	38744893	38751358	-	ENST00000409276.5@SRSF7	ENST00000409276.5	protein_coding	38751229,38750014,38749529,38748579,38748056,38746694,38746144,38744893	38751358,38750194,38749705,38748653,38748157,38746747,38746179,38745187	Gene ID= ENSG00000115875.18 TPM= 23.94 Transcript Type= protein_coding
chr2	38744918	38751352	38744918	38751352	-	ENST00000443213.5@SRSF7	ENST00000443213.5	protein_coding	38751229,38750014,38748579,38748047,38746694,38746144,38744918	38751352,38750194,38749705,38748157,38746747,38746179,38745187	Gene ID= ENSG00000115875.18 TPM= 15.18 Transcript Type= nonsense_mediated_decay
chr2	38778210	38781947	38778210	38781947	+	ENST00000409566.1@GEMIN6	ENST00000409566.1	protein_coding	38778210,38778972,38779258,38781517	38778281,38779118,38779441,38781947	Gene ID= ENSG00000152147.10 TPM= 2.34 Transcript Type= protein_coding
chr2	38778185	38785000	38778185	38785000	+	ENST00000281950.7@GEMIN6	ENST00000281950.7	protein_coding	38778185,38778972,38781517	38778281,38779118,38785000	Gene ID= ENSG00000152147.10 TPM= 9.34 Transcript Type= protein_coding
chr2	38797729	38875908	38797729	38875908	-	ENST00000457308.5@DHX57	ENST00000457308.5	protein_coding	38875787,38868182,38863361,38862145,38860999,38858661,38856340,38855057,38854054,38848269,38847019,38843005,38837831,38828340,38826516,38825847,38822993,38819049,38818877,38815521,38813821,38806559,38802715,38797729	38875908,38868411,38863519,38862333,38861837,38858836,38856461,38855252,38854178,38848402,38847073,38843210,38837947,38828436,38826689,38826047,38823269,38819144,38818960,38815655,38813895,38806693,38802915,38798442	Gene ID= ENSG00000163214.20 TPM= 4.67 Transcript Type= protein_coding
chr2	38875962	38882709	38875962	38882709	+	ENST00000340556.10@MORN2	ENST00000340556.10	protein_coding	38875962,38880179,38880600,38881442,38882413	38876110,38880229,38880706,38881578,38882709	Gene ID= ENSG00000188010.12 TPM= 4.67 Transcript Type= protein_coding
chr2	38876011	38882647	38876011	38882647	+	ENST00000409665.5@MORN2	ENST00000409665.5	protein_coding	38876011,38880179,38880582,38881442,38882413	38876110,38880229,38880706,38881578,38882647	Gene ID= ENSG00000188010.12 TPM= 3.5 Transcript Type= protein_coding
chr2	38959287	38960342	38959287	38960342	-	ENST00000601251.2@AC019171.1	ENST00000601251.2	antisense_RNA	38959287	38960342	Gene ID= ENSG00000269210.2 TPM= 1.17 Transcript Type= antisense_RNA
chr2	39249283	39437141	39249283	39437141	-	transcript1573.chr2.nnic@MAP4K3	transcript1573.chr2.nnic	protein_coding	39436892,39378066,39356249,39343388,39337526,39336920,39333532,39331917,39326146,39325899,39325730,39325518,39315310,39309461,39307943,39299743,39293230,39292773,39290292,39288121,39286852,39282513,39280272,39278407,39272482,39272283,39267189,39265203,39260606,39258519,39258348,39254450,39251830,39249283	39437141,39378123,39356339,39343452,39337581,39336967,39333574,39331989,39326277,39325961,39325811,39325628,39315388,39309519,39308005,39299801,39293268,39292826,39290334,39288280,39286964,39282554,39280356,39278486,39272542,39272400,39267247,39265306,39260777,39258587,39258440,39254545,39251885,39250705	Gene ID= ENSG00000011566.14 TPM= 2.34 Transcript Type= NA
chr2	39249283	39437142	39249283	39437142	-	transcript1575.chr2.nnic@MAP4K3	transcript1575.chr2.nnic	protein_coding	39436892,39378066,39356249,39343388,39337526,39336920,39331917,39326146,39325899,39325730,39325518,39315310,39309461,39307943,39299743,39293230,39292773,39290292,39288121,39286852,39282513,39280272,39278407,39272482,39272283,39267189,39265203,39260606,39258519,39258348,39254450,39251830,39249283	39437142,39378123,39356339,39343452,39337581,39336967,39331989,39326277,39325961,39325811,39325628,39315388,39309519,39308005,39299801,39293268,39292826,39290334,39288280,39286964,39282554,39280356,39278486,39272542,39272400,39267247,39265306,39260777,39258587,39258440,39254520,39251885,39250705	Gene ID= ENSG00000011566.14 TPM= 3.12 Transcript Type= NA
chr2	39249283	39437301	39249283	39437301	-	ENST00000341681.9@MAP4K3	ENST00000341681.9	protein_coding	39436892,39378066,39356249,39343388,39337526,39336920,39333532,39331917,39326146,39325899,39325730,39325518,39315310,39309461,39299743,39293230,39292773,39290292,39288121,39286852,39282513,39280272,39278407,39272482,39272283,39267189,39265203,39260606,39258519,39258348,39254450,39251830,39249283	39437301,39378123,39356339,39343452,39337581,39336967,39333574,39331989,39326277,39325961,39325811,39325628,39315388,39309519,39299801,39293268,39292826,39290334,39288280,39286964,39282554,39280356,39278486,39272542,39272400,39267247,39265306,39260777,39258587,39258440,39254520,39251885,39250705	Gene ID= ENSG00000011566.14 TPM= 25.3 Transcript Type= protein_coding
chr2	39249266	39437312	39249266	39437312	-	ENST00000263881.7@MAP4K3	ENST00000263881.7	protein_coding	39436892,39378066,39356249,39343388,39337526,39336920,39333532,39331917,39326146,39325899,39325730,39325518,39315310,39309461,39307943,39299743,39293230,39292773,39290292,39288121,39286852,39282513,39280272,39278407,39272482,39272283,39267189,39265203,39260606,39258519,39258348,39254450,39251830,39249266	39437312,39378123,39356339,39343452,39337581,39336967,39333574,39331989,39326277,39325961,39325811,39325628,39315388,39309519,39308005,39299801,39293268,39292826,39290334,39288280,39286964,39282554,39280356,39278486,39272542,39272400,39267247,39265306,39260777,39258587,39258440,39254520,39251885,39250705	Gene ID= ENSG00000011566.14 TPM= 21.8 Transcript Type= protein_coding
chr2	39476844	39480249	39476844	39480249	+	transcript1593.chr2.nnic@NA	transcript1593.chr2.nnic	NA	39476844	39480249	Gene ID= novel_gene_chr2_1594 TPM= 2.34 Transcript Type= NA
chr2	39480784	39484429	39480784	39484429	-	transcript1595.chr2.nnic@NA	transcript1595.chr2.nnic	NA	39480784	39484429	Gene ID= novel_gene_chr2_1596 TPM= 12.84 Transcript Type= NA
chr2	39665900	39717963	39665900	39717963	+	transcript1599.chr2.nic@TMEM178A	transcript1599.chr2.nic	protein_coding	39665900,39704081,39717010	39666374,39704194,39717963	Gene ID= ENSG00000152154.10 TPM= 2.34 Transcript Type= NA
chr2	39665919	39717963	39665919	39717963	+	ENST00000281961.2@TMEM178A	ENST00000281961.2	protein_coding	39665919,39704081,39707049,39717010	39666374,39704194,39707186,39717963	Gene ID= ENSG00000152154.10 TPM= 11.68 Transcript Type= protein_coding
chr2	39736305	39779261	39736305	39779261	-	transcript1600.chr2.nic@THUMPD2	transcript1600.chr2.nic	protein_coding	39779114,39771505,39769710,39768901,39768424,39766057,39761331,39757248,39755889,39755295,39744370,39736305	39779261,39771640,39770119,39769093,39768501,39766109,39761418,39757368,39755960,39755409,39744478,39737059	Gene ID= ENSG00000138050.14 TPM= 3.5 Transcript Type= NA
chr2	39736307	39779267	39736307	39779267	-	ENST00000378727.8@THUMPD2	ENST00000378727.8	protein_coding	39779114,39771505,39769710,39768424,39766057,39761331,39757248,39755889,39755295,39744370,39736307	39779267,39771640,39770119,39768501,39766109,39761418,39757368,39755960,39755409,39744478,39737059	Gene ID= ENSG00000138050.14 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr2	39736305	39779261	39736305	39779261	-	transcript1603.chr2.nic@THUMPD2	transcript1603.chr2.nic	protein_coding	39779114,39771505,39768424,39766057,39761331,39757248,39755889,39755295,39744370,39736305	39779261,39771640,39770119,39766109,39761418,39757368,39755960,39755409,39744478,39737059	Gene ID= ENSG00000138050.14 TPM= 2.34 Transcript Type= NA
chr2	39736305	39779267	39736305	39779267	-	ENST00000505747.5@THUMPD2	ENST00000505747.5	protein_coding	39779114,39771505,39769710,39768424,39766057,39761331,39755889,39755295,39744370,39736305	39779267,39771640,39770119,39768501,39766109,39761418,39755960,39755409,39744478,39737059	Gene ID= ENSG00000138050.14 TPM= 8.17 Transcript Type= protein_coding
chr2	40112146	40452423	40112146	40452423	-	transcript1612.chr2.nic@SLC8A1	transcript1612.chr2.nic	protein_coding	40451904,40446415,40428473,40177752,40174825,40164854,40160765,40139401,40112146	40452423,40446648,40430304,40177855,40174842,40164984,40160864,40139676,40115629	Gene ID= ENSG00000183023.18 TPM= 15.18 Transcript Type= NA
chr2	40384779	40387957	40384779	40387957	+	transcript1617.chr2.nnic@NA	transcript1617.chr2.nnic	NA	40384779	40387957	Gene ID= novel_gene_chr2_1618 TPM= 3.5 Transcript Type= NA
chr2	42048019	42052766	42048019	42052766	+	transcript1643.chr2.nnic@NA	transcript1643.chr2.nnic	NA	42048019	42052766	Gene ID= novel_gene_chr2_1644 TPM= 5.84 Transcript Type= NA
chr2	42048019	42058514	42048019	42058514	+	transcript1625.chr2.nnic@PKDCC	transcript1625.chr2.nnic	protein_coding	42048019,42053239,42054036,42054941,42055286,42057221,42057603,42058100	42048838,42053361,42054307,42055020,42055393,42057394,42058050,42058514	Gene ID= ENSG00000162878.12 TPM= 3.79 Transcript Type= NA
chr2	42048020	42058528	42048020	42058528	+	ENST00000294964.5@PKDCC	ENST00000294964.5	protein_coding	42048020,42053239,42054036,42054941,42055286,42057221,42057603	42048838,42053361,42054307,42055020,42055393,42057394,42058528	Gene ID= ENSG00000162878.12 TPM= 82.22 Transcript Type= protein_coding
chr2	42048019	42058528	42048019	42058528	+	transcript1636.chr2.nic@PKDCC	transcript1636.chr2.nic	protein_coding	42048019,42053239,42054036,42055286,42057221,42057603	42048838,42053361,42055020,42055393,42057394,42058528	Gene ID= ENSG00000162878.12 TPM= 13.92 Transcript Type= NA
chr2	42048019	42058469	42048019	42058469	+	transcript1639.chr2.nic@PKDCC	transcript1639.chr2.nic	protein_coding	42048019,42053239,42054036,42055286,42057221	42048838,42053361,42055020,42055393,42058469	Gene ID= ENSG00000162878.12 TPM= 2.34 Transcript Type= NA
chr2	42048019	42058528	42048019	42058528	+	transcript1640.chr2.nic@PKDCC	transcript1640.chr2.nic	protein_coding	42048019,42053239,42054036,42057256,42057603	42048838,42053361,42055020,42057394,42058528	Gene ID= ENSG00000162878.12 TPM= 3.99 Transcript Type= NA
chr2	42169290	42332548	42169290	42332548	+	transcript1652.chr2.nnic@EML4	transcript1652.chr2.nnic	protein_coding	42169290,42245505,42256501,42261121,42263178,42264706,42280850,42282823,42284634,42286269,42288227,42295125,42295381,42301241,42303104,42303315,42304484,42315962,42317427,42325467,42326045,42328886,42329734	42169636,42245687,42256630,42261294,42263306,42264731,42280973,42282972,42284703,42286379,42288322,42295259,42295516,42301392,42303229,42303446,42304551,42316050,42317524,42325554,42326252,42329016,42332548	Gene ID= ENSG00000143924.18 TPM= 4.96 Transcript Type= NA
chr2	42169371	42330744	42169371	42330744	+	transcript1656.chr2.nnic@EML4	transcript1656.chr2.nnic	protein_coding	42169371,42245505,42256501,42261121,42263178,42264706,42280850,42282823,42284634,42286323,42288227,42295125,42295381,42301241,42303104,42303315,42304484,42315962,42317427,42325467,42326154,42328886,42329734	42169636,42245687,42256630,42261294,42263306,42264731,42280973,42282972,42284703,42286379,42288322,42295259,42295516,42301392,42303229,42303446,42304551,42316050,42317524,42325554,42326252,42329016,42330744	Gene ID= ENSG00000143924.18 TPM= 3.5 Transcript Type= NA
chr2	42169350	42332548	42169350	42332548	+	ENST00000318522.9@EML4	ENST00000318522.9	protein_coding	42169350,42245505,42256501,42261121,42263178,42264706,42280850,42282823,42284634,42286269,42288227,42295125,42295381,42301241,42303104,42303315,42304484,42315962,42317427,42325467,42326154,42328886,42329734	42169636,42245687,42256630,42261294,42263306,42264731,42280973,42282972,42284703,42286379,42288322,42295259,42295516,42301392,42303229,42303446,42304551,42316050,42317524,42325554,42326252,42329016,42332548	Gene ID= ENSG00000143924.18 TPM= 47.78 Transcript Type= protein_coding
chr2	42169381	42261513	42169381	42261513	+	ENST00000409040.1@EML4	ENST00000409040.1	protein_coding	42169381,42245505,42256501,42261121	42169636,42245687,42256630,42261513	Gene ID= ENSG00000143924.18 TPM= 1.17 Transcript Type= retained_intron
chr2	42179265	42184378	42179265	42184378	-	transcript1674.chr2.nnic@NA	transcript1674.chr2.nnic	NA	42179265	42184378	Gene ID= novel_gene_chr2_1675 TPM= 8.17 Transcript Type= NA
chr2	42349338	42369010	42349338	42369010	-	ENST00000378669.5@COX7A2L	ENST00000378669.5	protein_coding	42368868,42361090,42353212,42349338	42369010,42361848,42353343,42351359	Gene ID= ENSG00000115944.14 TPM= 156.46 Transcript Type= protein_coding
chr2	42350507	42361216	42350507	42361216	-	ENST00000234301.2@COX7A2L	ENST00000234301.2	protein_coding	42361090,42353212,42350507	42361216,42353343,42351359	Gene ID= ENSG00000115944.14 TPM= 156.46 Transcript Type= protein_coding
chr2	42568580	42709211	42568580	42709211	+	transcript1691.chr2.nic@MTA3	transcript1691.chr2.nic	protein_coding	42568580,42570437,42609458,42640173,42644127,42656200,42659763,42682401,42695765,42697776,42704197,42707903,42708874	42568773,42570504,42609584,42640236,42644244,42656302,42659862,42682589,42695839,42697834,42704318,42708054,42709211	Gene ID= ENSG00000057935.13 TPM= 2.34 Transcript Type= NA
chr2	42568675	42709213	42568675	42709213	+	ENST00000454356.5@MTA3	ENST00000454356.5	protein_coding	42568675,42570437,42579107,42609458,42640173,42644127,42656200,42659763,42682401,42695765,42697776,42704197,42707911,42708874	42568773,42570504,42579200,42609584,42640236,42644244,42656302,42659862,42682589,42695839,42697834,42704318,42708054,42709213	Gene ID= ENSG00000057935.13 TPM= 7.01 Transcript Type= nonsense_mediated_decay
chr2	42568675	42709544	42568675	42709544	+	ENST00000406911.5@MTA3	ENST00000406911.5	protein_coding	42568675,42570437,42579107,42609458,42640173,42644127,42656200,42659763,42682401,42695765,42697776,42704197,42707903,42708874	42568773,42570504,42579200,42609584,42640236,42644244,42656302,42659862,42682589,42695839,42697834,42704318,42708054,42709544	Gene ID= ENSG00000057935.13 TPM= 5.84 Transcript Type= protein_coding
chr2	42762498	42765508	42762498	42765508	-	transcript1699.chr2.nnic@NA	transcript1699.chr2.nnic	NA	42762498	42765508	Gene ID= novel_gene_chr2_1700 TPM= 2.34 Transcript Type= NA
chr2	42765714	42766831	42765714	42766831	+	transcript1704.chr2.nnic@NA	transcript1704.chr2.nnic	NA	42765714	42766831	Gene ID= novel_gene_chr2_1705 TPM= 2.34 Transcript Type= NA
chr2	42767089	42792592	42767089	42792592	-	ENST00000294973.10@HAAO	ENST00000294973.10	protein_coding	42792457,42788529,42783784,42783314,42770493,42770143,42769713,42767860,42767595,42767089	42792592,42788607,42783867,42783420,42770582,42770186,42769858,42767928,42767677,42767515	Gene ID= ENSG00000162882.14 TPM= 3.5 Transcript Type= protein_coding
chr2	42767120	42792574	42767120	42792574	-	ENST00000402698.6@HAAO	ENST00000402698.6	protein_coding	42792457,42788529,42783784,42783314,42770143,42769713,42767860,42767595,42767120	42792574,42788607,42783867,42783420,42770582,42769858,42767928,42767677,42767515	Gene ID= ENSG00000162882.14 TPM= 1.17 Transcript Type= retained_intron
chr2	42793851	42796638	42793851	42796638	-	transcript1706.chr2.nnic@NA	transcript1706.chr2.nnic	NA	42793851	42796638	Gene ID= novel_gene_chr2_1707 TPM= 2.34 Transcript Type= NA
chr2	43222402	43226609	43222402	43226609	-	ENST00000282388.3@ZFP36L2	ENST00000282388.3	protein_coding	43226265,43222402	43226609,43225752	Gene ID= ENSG00000152518.7 TPM= 378.3 Transcript Type= protein_coding
chr2	43552068	43596056	43552068	43596056	-	transcript1716.chr2.nnic@THADA	transcript1716.chr2.nnic	protein_coding	43595931,43592317,43591952,43590824,43586854,43586702,43586401,43581741,43578513,43577022,43574336,43572814,43571707,43570388,43566698,43560234,43556345,43552068	43596056,43592416,43592046,43590954,43587002,43586734,43586449,43581928,43578607,43577122,43575027,43572992,43571862,43570510,43566821,43560385,43556555,43552339	Gene ID= ENSG00000115970.18 TPM= 2.92 Transcript Type= NA
chr2	43230836	43596046	43230836	43596046	-	ENST00000405975.6@THADA	ENST00000405975.6	protein_coding	43595931,43592317,43591952,43590824,43586854,43586702,43586401,43581741,43578513,43577022,43574336,43572814,43571707,43570388,43566698,43560234,43556345,43552204,43551789,43549210,43541159,43527879,43508648,43505622,43498833,43485234,43430213,43428100,43397971,43344122,43320446,43292834,43292104,43291696,43286908,43279765,43232713,43230836	43596046,43592416,43592046,43590954,43587002,43586734,43586449,43581928,43578607,43577242,43575027,43572992,43571862,43570510,43566821,43560385,43556555,43552339,43551925,43549368,43541316,43527988,43508780,43505735,43498955,43485325,43430302,43428231,43398139,43344237,43320540,43293213,43292222,43291768,43287061,43279896,43232882,43231343	Gene ID= ENSG00000115970.18 TPM= 12.26 Transcript Type= protein_coding
chr2	43637264	43744893	43637264	43744893	+	transcript1741.chr2.nic@PLEKHH2	transcript1741.chr2.nic	protein_coding	43637264,43644671,43678863,43692514,43694431,43695143,43697171,43699647,43703981,43706322,43707401,43709990,43710220,43710489,43712225,43720669,43726272,43729637,43731490,43738341,43740946,43742741,43743834	43637379,43644796,43678925,43692663,43694514,43695224,43697356,43700608,43704056,43706416,43707545,43710126,43710330,43710575,43712383,43720749,43726451,43729745,43731602,43738520,43741043,43742918,43744893	Gene ID= ENSG00000152527.13 TPM= 3.5 Transcript Type= NA
chr2	43637273	43767987	43637273	43767987	+	ENST00000282406.8@PLEKHH2	ENST00000282406.8	protein_coding	43637273,43644671,43678863,43692514,43694431,43695143,43697171,43699647,43703981,43706322,43707401,43709990,43710220,43710489,43712225,43720669,43726272,43729637,43731490,43738341,43740946,43742741,43743834,43745866,43753619,43757119,43758900,43762304,43764228,43765413	43637379,43644796,43678925,43692663,43694514,43695224,43697356,43700608,43704056,43706416,43707545,43710126,43710330,43710575,43712383,43720749,43726451,43729745,43731602,43738520,43741043,43742918,43743989,43745963,43753760,43757264,43759029,43762390,43764365,43767987	Gene ID= ENSG00000152527.13 TPM= 8.17 Transcript Type= protein_coding
chr2	43774039	43810010	43774039	43810010	+	ENST00000260605.12@DYNC2LI1	ENST00000260605.12	protein_coding	43774039,43776782,43783520,43787181,43789633,43794457,43795890,43796718,43800841,43801639,43804642,43805154,43809705	43774146,43776899,43783554,43787250,43789721,43794643,43795958,43796795,43800917,43801709,43804739,43805246,43810010	Gene ID= ENSG00000138036.18 TPM= 12.84 Transcript Type= protein_coding
chr2	43774082	43809997	43774082	43809997	+	ENST00000605786.5@DYNC2LI1	ENST00000605786.5	protein_coding	43774082,43776782,43783520,43787181,43789633,43794457,43795887,43796718,43800841,43801639,43804642,43805154,43809705	43774146,43776899,43783554,43787250,43789721,43794643,43795958,43796795,43800917,43801709,43804739,43805246,43809997	Gene ID= ENSG00000138036.18 TPM= 2.34 Transcript Type= protein_coding
chr2	43886508	43996005	43886508	43996005	-	ENST00000260665.11@LRPPRC	ENST00000260665.11	protein_coding	43995799,43982238,43979826,43977155,43976994,43976143,43975091,43974614,43974150,43973795,43973607,43963588,43960541,43957385,43950573,43949602,43948412,43948122,43947731,43947257,43946113,43945332,43943687,43934754,43934190,43925893,43925067,43918256,43918025,43912432,43905692,43901320,43899466,43899219,43896634,43894545,43889734,43886508	43996005,43982434,43979948,43977276,43977052,43976229,43975217,43974758,43974295,43973900,43973714,43963706,43960634,43957451,43950600,43949659,43948518,43948199,43947775,43947370,43946243,43945417,43943894,43934878,43934296,43925961,43925157,43918398,43918133,43912558,43905780,43901524,43899605,43899334,43896708,43894629,43889876,43888656	Gene ID= ENSG00000138095.18 TPM= 21.6 Transcript Type= protein_coding
chr2	43942575	43996007	43942575	43996007	-	transcript1763.chr2.nnic@LRPPRC	transcript1763.chr2.nnic	protein_coding	43995799,43982238,43979826,43977155,43976994,43976143,43975091,43974614,43974150,43973795,43973607,43963588,43960541,43957385,43950573,43949602,43948412,43948122,43947731,43947257,43946113,43945332,43943687,43942575	43996007,43982434,43979948,43977276,43977052,43976229,43975217,43974758,43974295,43973900,43973714,43963706,43960634,43957451,43950600,43949659,43948518,43948199,43947775,43947370,43946243,43945417,43943894,43942803	Gene ID= ENSG00000138095.18 TPM= 4.09 Transcript Type= NA
chr2	43975582	43996007	43975582	43996007	-	transcript1766.chr2.nic@LRPPRC	transcript1766.chr2.nic	protein_coding	43995799,43982238,43979826,43977155,43975582	43996007,43982434,43979948,43977276,43977052	Gene ID= ENSG00000138095.18 TPM= 3.5 Transcript Type= NA
chr2	44168883	44204884	44168883	44204884	+	transcript1778.chr2.nic@PPM1B	transcript1778.chr2.nic	protein_coding	44168883,44201186	44169274,44204884	Gene ID= ENSG00000138032.20 TPM= 2.34 Transcript Type= NA
chr2	44168877	44231472	44168877	44231472	+	ENST00000282412.8@PPM1B	ENST00000282412.8	protein_coding	44168877,44201186,44209210,44217967,44218480,44230413	44169274,44202045,44209327,44218078,44218537,44231472	Gene ID= ENSG00000138032.20 TPM= 50.21 Transcript Type= protein_coding
chr2	44318763	44361546	44318763	44361546	-	ENST00000409411.5@PREPL	ENST00000409411.5	protein_coding	44361380,44346268,44344520,44343745,44342417,44339147,44338351,44332459,44328937,44326712,44323262,44322731,44321827,44318763	44361546,44346390,44344586,44343951,44342552,44339363,44338536,44332656,44329112,44326928,44323411,44322854,44321900,44321445	Gene ID= ENSG00000138078.15 TPM= 9.34 Transcript Type= protein_coding
chr2	44318763	44361561	44318763	44361561	-	ENST00000409957.5@PREPL	ENST00000409957.5	protein_coding	44361417,44346268,44344520,44343745,44342417,44339147,44338351,44332459,44328937,44326712,44323262,44322731,44321827,44318763	44361561,44346390,44344586,44343951,44342552,44339363,44338536,44332656,44329112,44326928,44323411,44322854,44321900,44321445	Gene ID= ENSG00000138078.15 TPM= 2.34 Transcript Type= protein_coding
chr2	44317611	44361862	44317611	44361862	-	ENST00000541738.5@PREPL	ENST00000541738.5	protein_coding	44361524,44346268,44344520,44343745,44342417,44339147,44338351,44332459,44328937,44326712,44323262,44322731,44321827,44317611	44361862,44346390,44344586,44343951,44342552,44339363,44338536,44332656,44329112,44326928,44323411,44322854,44321900,44321445	Gene ID= ENSG00000138078.15 TPM= 3.5 Transcript Type= protein_coding
chr2	44318766	44361494	44318766	44361494	-	ENST00000409936.5@PREPL	ENST00000409936.5	protein_coding	44361380,44359497,44346268,44344520,44343745,44342417,44339147,44338351,44332459,44328937,44326712,44323262,44322731,44321827,44318766	44361494,44360038,44346390,44344586,44343951,44342552,44339363,44338536,44332656,44329112,44326928,44323411,44322854,44321900,44321445	Gene ID= ENSG00000138078.15 TPM= 2.34 Transcript Type= protein_coding
chr2	45005161	45009430	45005161	45009430	-	ENST00000303077.6@SIX2	ENST00000303077.6	protein_coding	45008551,45005161	45009430,45006485	Gene ID= ENSG00000170577.7 TPM= 1.17 Transcript Type= protein_coding
chr2	45388680	45611281	45388680	45611281	-	ENST00000263736.4@SRBD1	ENST00000263736.4	protein_coding	45611219,45605362,45601903,45599449,45585608,45581693,45579875,45574627,45573207,45562653,45553623,45551125,45547522,45546732,45488240,45476993,45419788,45418365,45413114,45392945,45388680	45611281,45605441,45602083,45599835,45585774,45581810,45580013,45574723,45573342,45562756,45553730,45551282,45547612,45546839,45488331,45477075,45419894,45418541,45413293,45393129,45389599	Gene ID= ENSG00000068784.12 TPM= 21.02 Transcript Type= protein_coding
chr2	45648732	45651007	45648732	45651007	-	transcript1805.chr2.nnic@NA	transcript1805.chr2.nnic	NA	45648732	45651007	Gene ID= novel_gene_chr2_1806 TPM= 2.34 Transcript Type= NA
chr2	45651161	46187990	45651161	46187990	+	transcript1807.chr2.nic@PRKCE	transcript1807.chr2.nic	protein_coding	45651161,45651904,45843000,45976429,45978976,45980296,45984551,46001404,46004542,46007462,46010344,46086208,46145093,46151041,46159606,46184735	45651703,45652448,45843063,45976588,45979010,45980381,45984680,46001546,46004638,46007661,46010517,46086362,46145231,46151229,46159752,46187990	Gene ID= ENSG00000171132.13 TPM= 9.92 Transcript Type= NA
chr2	46002857	46187990	46002857	46187990	+	transcript1811.chr2.nnic@PRKCE	transcript1811.chr2.nnic	protein_coding	46002857,46004542,46007462,46010344,46086208,46145093,46151041,46159606,46184735	46003023,46004638,46007661,46010517,46086362,46145231,46151229,46159752,46187990	Gene ID= ENSG00000171132.13 TPM= 11.09 Transcript Type= NA
chr2	46073583	46187990	46073583	46187990	+	transcript1812.chr2.nic@PRKCE	transcript1812.chr2.nic	protein_coding	46073583,46086208,46145093,46151041,46159606,46184735	46073998,46086362,46145231,46151229,46159752,46187990	Gene ID= ENSG00000171132.13 TPM= 21.02 Transcript Type= NA
chr2	46073757	46187990	46073757	46187990	+	transcript1813.chr2.nic@PRKCE	transcript1813.chr2.nic	protein_coding	46073757,46086208,46145093,46151041,46159606,46184735	46073960,46086362,46145231,46151229,46159752,46187990	Gene ID= ENSG00000171132.13 TPM= 11.68 Transcript Type= NA
chr2	45651110	45845758	45651110	45845758	+	transcript1815.chr2.nic@PRKCE	transcript1815.chr2.nic	protein_coding	45651110,45843000,45845395	45652448,45843063,45845758	Gene ID= ENSG00000171132.13 TPM= 5.84 Transcript Type= NA
chr2	45653372	45659095	45653372	45659095	-	transcript1816.chr2.nnic@NA	transcript1816.chr2.nnic	NA	45653372	45659095	Gene ID= novel_gene_chr2_1817 TPM= 40.87 Transcript Type= NA
chr2	45762958	45765711	45762958	45765711	-	transcript1818.chr2.nnic@NA	transcript1818.chr2.nnic	NA	45762958	45765711	Gene ID= novel_gene_chr2_1819 TPM= 2.34 Transcript Type= NA
chr2	45868901	45869996	45868901	45869996	-	transcript1820.chr2.nnic@NA	transcript1820.chr2.nnic	NA	45868901	45869996	Gene ID= novel_gene_chr2_1821 TPM= 2.34 Transcript Type= NA
chr2	45903883	45910044	45903883	45910044	-	transcript1822.chr2.nnic@NA	transcript1822.chr2.nnic	NA	45903883	45910044	Gene ID= novel_gene_chr2_1823 TPM= 3.5 Transcript Type= NA
chr2	46297402	46386703	46297402	46386703	+	ENST00000263734.4@EPAS1	ENST00000263734.4	protein_coding	46297402,46346873,46356151,46356724,46360638,46360885,46369827,46375690,46376539,46377894,46378657,46380227,46381596,46381975,46382425,46384509	46297937,46347063,46356302,46356808,46360756,46361090,46369933,46375837,46376753,46378087,46378767,46380717,46381722,46382089,46382598,46386703	Gene ID= ENSG00000116016.13 TPM= 997.13 Transcript Type= protein_coding
chr2	46297562	46301594	46297562	46301594	+	transcript1832.chr2.nnic@NA	transcript1832.chr2.nnic	NA	46297562	46301594	Gene ID= novel_gene_chr2_1833 TPM= 10.51 Transcript Type= NA
chr2	46511850	46542616	46511850	46542616	-	transcript1856.chr2.nnic@ATP6V1E2	transcript1856.chr2.nnic	protein_coding	46541390,46536611,46535813,46527941,46511850	46542616,46536703,46535927,46528047,46512812	Gene ID= ENSG00000250565.6 TPM= 2.34 Transcript Type= NA
chr2	46542721	46584226	46542721	46584226	+	transcript1866.chr2.nic@RHOQ	transcript1866.chr2.nic	protein_coding	46542721,46576087,46576561,46580928	46543188,46576251,46576656,46584226	Gene ID= ENSG00000119729.11 TPM= 4.67 Transcript Type= NA
chr2	46542728	46583121	46542728	46583121	+	ENST00000238738.8@RHOQ	ENST00000238738.8	protein_coding	46542728,46543754,46576087,46576561,46580928	46543188,46543812,46576251,46576656,46583121	Gene ID= ENSG00000119729.11 TPM= 64.8 Transcript Type= protein_coding
chr2	46580937	46617119	46580937	46617119	-	ENST00000281382.10@PIGF	ENST00000281382.10	protein_coding	46616970,46614937,46613694,46612228,46592475,46580937	46617119,46615185,46613785,46612344,46592583,46581591	Gene ID= ENSG00000151665.12 TPM= 2.92 Transcript Type= protein_coding
chr2	46581285	46617051	46581285	46617051	-	ENST00000306465.8@PIGF	ENST00000306465.8	protein_coding	46616970,46614937,46613694,46612228,46592475,46588075,46581285	46617051,46615185,46613785,46612344,46592583,46588179,46581591	Gene ID= ENSG00000151665.12 TPM= 4.09 Transcript Type= protein_coding
chr2	46611964	46617039	46611964	46617039	-	transcript1872.chr2.nnic@NA	transcript1872.chr2.nnic	NA	46611964	46617039	Gene ID= novel_gene_chr2_1873 TPM= 2.34 Transcript Type= NA
chr2	46617151	46625742	46617151	46625742	+	ENST00000238892.3@CRIPT	ENST00000238892.3	protein_coding	46617151,46618773,46619627,46623764,46624163	46617298,46618838,46619681,46623867,46625742	Gene ID= ENSG00000119878.5 TPM= 12.84 Transcript Type= protein_coding
chr2	46625377	46628351	46625377	46628351	-	transcript1880.chr2.nnic@NA	transcript1880.chr2.nnic	NA	46625377	46628351	Gene ID= novel_gene_chr2_1881 TPM= 51.37 Transcript Type= NA
chr2	46699187	46762313	46699187	46762313	+	ENST00000394861.2@SOCS5	ENST00000394861.2	protein_coding	46699187,46758519	46699449,46762313	Gene ID= ENSG00000171150.7 TPM= 15.18 Transcript Type= protein_coding
chr2	46901874	46915868	46901874	46915868	-	ENST00000319466.8@MCFD2	ENST00000319466.8	protein_coding	46915723,46909023,46907810,46901874	46915868,46909177,46907969,46905594	Gene ID= ENSG00000180398.11 TPM= 183.9 Transcript Type= protein_coding
chr2	46901874	46915816	46901874	46915816	-	ENST00000409913.5@MCFD2	ENST00000409913.5	protein_coding	46915723,46907810,46901874	46915816,46907969,46905594	Gene ID= ENSG00000180398.11 TPM= 19.27 Transcript Type= protein_coding
chr2	46941205	47075324	46941205	47075324	+	transcript1896.chr2.nic@TTC7A	transcript1896.chr2.nic	protein_coding	46941205,46950363,46956839,46958495,46974973,46978792,46993450,46994357,46995136,47005922,47006641,47011331,47021862,47023408,47024287,47029224,47046315,47049949,47051746,47060769,47073702	46941725,46950526,46957007,46958552,46975103,46978907,46993528,46994514,46995199,47006059,47006724,47011435,47021979,47023465,47024359,47029384,47046431,47050046,47051880,47060971,47075324	Gene ID= ENSG00000068724.15 TPM= 5.06 Transcript Type= NA
chr2	46941226	47074048	46941226	47074048	+	transcript1907.chr2.nic@TTC7A	transcript1907.chr2.nic	protein_coding	46941226,46950363,46956839,46974973,46978792,46993450,46994357,46995136,47005922,47006641,47011331,47021862,47023408,47024287,47029224,47046315,47049949,47051746,47060769,47073702	46941725,46950526,46958552,46975103,46978907,46993528,46994514,46995199,47006059,47006724,47011435,47021979,47023465,47024359,47029384,47046431,47050046,47051880,47060971,47074048	Gene ID= ENSG00000068724.15 TPM= 3.5 Transcript Type= NA
chr2	46941174	47076135	46941174	47076135	+	ENST00000319190.9@TTC7A	ENST00000319190.9	protein_coding	46941174,46950363,46956839,46974973,46978792,46993450,46994357,46995136,47005922,47006641,47011331,47021862,47023408,47024287,47029224,47046315,47049949,47051746,47060769,47073702	46941725,46950526,46957007,46975103,46978907,46993528,46994514,46995199,47006059,47006724,47011435,47021979,47023465,47024359,47029384,47046431,47050046,47051880,47060971,47076135	Gene ID= ENSG00000068724.15 TPM= 39.11 Transcript Type= protein_coding
chr2	47160082	47176601	47160082	47176601	-	ENST00000272298.11@CALM2	ENST00000272298.11	protein_coding	47176441,47170734,47162519,47162286,47161723,47160082	47176601,47170764,47162662,47162392,47161858,47160804	Gene ID= ENSG00000143933.16 TPM= 741.42 Transcript Type= protein_coding
chr2	47175083	47176515	47175083	47176515	-	transcript1944.chr2.nnic@NA	transcript1944.chr2.nnic	NA	47175083	47176515	Gene ID= novel_gene_chr2_1945 TPM= 18.68 Transcript Type= NA
chr2	47335315	47335514	47335315	47335514	+	ENST00000418539.2@BCYRN1	ENST00000418539.2	scRNA	47335315	47335514	Gene ID= ENSG00000236824.2 TPM= 144.78 Transcript Type= scRNA
chr2	47402969	47483228	47402969	47483228	+	ENST00000233146.6@MSH2	ENST00000233146.6	protein_coding	47402969,47408401,47410094,47412414,47414269,47416296,47429742,47445548,47463031,47466658,47470965,47475025,47476367,47478272,47480696,47482779	47403402,47408555,47410372,47412560,47414418,47416429,47429941,47445657,47463154,47466808,47471062,47475270,47476571,47478519,47480871,47483228	Gene ID= ENSG00000095002.13 TPM= 19.85 Transcript Type= protein_coding
chr2	47783102	47806952	47783102	47806952	+	transcript1965.chr2.nic@MSH6	transcript1965.chr2.nic	protein_coding	47783102,47790927,47795894,47798611,47803420,47803630,47804910,47805618,47806204,47806347,47806452,47806779	47783493,47791123,47796063,47801155,47803628,47803685,47805027,47805707,47806345,47806358,47806651,47806952	Gene ID= ENSG00000116062.14 TPM= 20.43 Transcript Type= NA
chr2	47783082	47806952	47783082	47806952	+	ENST00000622629.4@MSH6	ENST00000622629.4	protein_coding	47783082,47790927,47795894,47798611,47803420,47803630,47804902,47805618,47806204,47806310,47806347,47806452,47806779	47783493,47791123,47796063,47801155,47803628,47803678,47805027,47805707,47806307,47806345,47806358,47806651,47806952	Gene ID= ENSG00000116062.14 TPM= 20.43 Transcript Type= protein_coding
chr2	47834802	47906517	47834802	47906517	-	transcript1966.chr2.nic@FBXO11	transcript1966.chr2.nic	protein_coding	47905489,47839642,47839419,47838859,47835872,47834802	47906517,47839769,47839500,47839003,47836001,47834871	Gene ID= ENSG00000138081.20 TPM= 2.34 Transcript Type= NA
chr2	47806920	47905793	47806920	47905793	-	ENST00000403359.7@FBXO11	ENST00000403359.7	protein_coding	47905489,47839642,47839419,47838859,47835872,47834788,47834579,47832964,47832769,47832572,47832349,47823143,47822218,47820362,47818956,47818779,47813791,47813234,47810316,47809600,47809158,47808329,47806920	47905793,47839769,47839500,47839003,47836001,47834871,47834711,47833070,47832880,47832678,47832486,47823360,47822303,47820456,47819078,47818864,47813867,47813377,47810426,47809707,47809266,47808427,47808247	Gene ID= ENSG00000138081.20 TPM= 17.51 Transcript Type= protein_coding
chr2	48314657	48379294	48314657	48379294	+	transcript1972.chr2.nic@FOXN2	transcript1972.chr2.nic	protein_coding	48314657,48346201,48346533,48359047,48362643,48373292,48374920	48314814,48346530,48346751,48359147,48362707,48373360,48379294	Gene ID= ENSG00000170802.15 TPM= 3.5 Transcript Type= NA
chr2	48315038	48379294	48315038	48379294	+	transcript1974.chr2.nnic@FOXN2	transcript1974.chr2.nnic	protein_coding	48315038,48346201,48359047,48362643,48373292,48374920	48315089,48346751,48359147,48362707,48373360,48379294	Gene ID= ENSG00000170802.15 TPM= 2.34 Transcript Type= NA
chr2	48314710	48379294	48314710	48379294	+	ENST00000340553.7@FOXN2	ENST00000340553.7	protein_coding	48314710,48328561,48346201,48359047,48362643,48373292,48374920	48314814,48328702,48346751,48359147,48362707,48373360,48379294	Gene ID= ENSG00000170802.15 TPM= 4.67 Transcript Type= protein_coding
chr2	48440769	48515385	48440769	48515385	+	ENST00000416913.5@PPP1R21	ENST00000416913.5	protein_coding	48440769,48451008,48454556,48458126,48459754,48460095,48461138,48464937,48465493,48471087,48471279,48474683,48479924,48486631,48491018,48495679,48498493,48505564,48507269,48510015,48511340,48514715	48441010,48451076,48454741,48458227,48459918,48460153,48461232,48464989,48465642,48471188,48471367,48474819,48480016,48486758,48491170,48495771,48498735,48505596,48507385,48510113,48511468,48515385	Gene ID= ENSG00000162869.15 TPM= 5.06 Transcript Type= nonsense_mediated_decay
chr2	48440797	48515386	48440797	48515386	+	ENST00000294952.12@PPP1R21	ENST00000294952.12	protein_coding	48440797,48451008,48454595,48458126,48459754,48460095,48461138,48464937,48465493,48471087,48471279,48474683,48479924,48486631,48491018,48495679,48498493,48505564,48507269,48510015,48511340,48514715	48441010,48451076,48454741,48458227,48459918,48460153,48461232,48464989,48465642,48471188,48471367,48474819,48480016,48486758,48491170,48495771,48498735,48505596,48507385,48510113,48511468,48515386	Gene ID= ENSG00000162869.15 TPM= 21.4 Transcript Type= protein_coding
chr2	48440769	48515386	48440769	48515386	+	ENST00000281394.8@PPP1R21	ENST00000281394.8	protein_coding	48440769,48451008,48454595,48458126,48459754,48460095,48461138,48464937,48465493,48471087,48471279,48474683,48479924,48486631,48491018,48495679,48498493,48507269,48510015,48511340,48514715	48441010,48451076,48454741,48458227,48459918,48460153,48461232,48464989,48465642,48471188,48471367,48474819,48480016,48486758,48491170,48495771,48498735,48507385,48510113,48511468,48515386	Gene ID= ENSG00000162869.15 TPM= 2.72 Transcript Type= protein_coding
chr2	48445136	48450485	48445136	48450485	-	transcript1995.chr2.nnic@NA	transcript1995.chr2.nnic	NA	48448621,48447856,48445136	48450485,48448591,48446676	Gene ID= novel_gene_chr2_1996 TPM= 2.34 Transcript Type= NA
chr2	48530180	48598512	48530180	48598512	+	transcript2004.chr2.nic@STON1	transcript2004.chr2.nic	protein_coding	48530180,48580587,48591653,48595228	48530829,48582563,48591855,48598512	Gene ID= ENSG00000243244.5 TPM= 4.96 Transcript Type= NA
chr2	48568809	48598512	48568809	48598512	+	transcript2006.chr2.nic@STON1	transcript2006.chr2.nic	protein_coding	48568809,48580587,48591653,48595228	48569086,48582563,48591855,48598512	Gene ID= ENSG00000243244.5 TPM= 7.3 Transcript Type= NA
chr2	48530171	48598512	48530171	48598512	+	ENST00000404752.5@STON1	ENST00000404752.5	protein_coding	48530171,48580587,48591653,48595228	48530216,48582563,48591855,48598512	Gene ID= ENSG00000243244.5 TPM= 13.14 Transcript Type= protein_coding
chr2	48530186	48598513	48530186	48598513	+	ENST00000406226.1@STON1	ENST00000406226.1	protein_coding	48530186,48530713,48580587,48591653,48595228	48530216,48530829,48582563,48591855,48598513	Gene ID= ENSG00000243244.5 TPM= 6.13 Transcript Type= protein_coding
chr2	48598822	48604629	48598822	48604629	+	transcript2008.chr2.nnic@NA	transcript2008.chr2.nnic	NA	48598822	48604629	Gene ID= novel_gene_chr2_2009 TPM= 3.5 Transcript Type= NA
chr2	53662476	53665611	53662476	53665611	-	transcript2012.chr2.nnic@NA	transcript2012.chr2.nnic	NA	53662476	53665611	Gene ID= novel_gene_chr2_2013 TPM= 2.34 Transcript Type= NA
chr2	53667869	53669302	53667869	53669302	+	transcript2010.chr2.nnic@NA	transcript2010.chr2.nnic	NA	53667869	53669302	Gene ID= novel_gene_chr2_2011 TPM= 2.34 Transcript Type= NA
chr2	53669981	53786942	53669981	53786942	-	ENST00000263634.7@ASB3	ENST00000263634.7	protein_coding	53786821,53765377,53750783,53729458,53728712,53716566,53714384,53700271,53693884,53669981	53786942,53765585,53750941,53729570,53728847,53716743,53714581,53700528,53694014,53670690	Gene ID= ENSG00000115239.21 TPM= 11.68 Transcript Type= protein_coding
chr2	53670319	53787009	53670319	53787009	-	ENST00000394717.3@ASB3	ENST00000394717.3	protein_coding	53786821,53750783,53729458,53728712,53716566,53714384,53700271,53693884,53670319	53787009,53750941,53729570,53728847,53716743,53714581,53700528,53694014,53670690	Gene ID= ENSG00000115239.21 TPM= 3.5 Transcript Type= protein_coding
chr2	53758334	53761433	53758334	53761433	+	transcript2054.chr2.nnic@NA	transcript2054.chr2.nnic	NA	53758334	53761433	Gene ID= novel_gene_chr2_2055 TPM= 4.67 Transcript Type= NA
chr2	53767792	53775196	53767792	53775196	+	ENST00000295304.4@CHAC2	ENST00000295304.4	protein_coding	53767792,53771907,53774142	53768021,53771942,53775196	Gene ID= ENSG00000143942.4 TPM= 1.17 Transcript Type= protein_coding
chr2	53787080	53818819	53787080	53818819	+	ENST00000185150.8@ERLEC1	ENST00000185150.8	protein_coding	53787080,53794345,53795933,53797515,53797732,53799047,53801397,53801713,53808299,53809214,53812949,53814543,53814860,53817898	53787372,53794449,53796013,53797592,53797795,53799081,53801620,53801842,53808460,53809273,53813073,53814620,53814935,53818819	Gene ID= ENSG00000068912.13 TPM= 142.64 Transcript Type= protein_coding
chr2	53787080	53818819	53787080	53818819	+	ENST00000378239.5@ERLEC1	ENST00000378239.5	protein_coding	53787080,53794345,53795933,53797515,53797732,53799047,53801397,53801713,53809214,53812949,53814543,53814860,53817898	53787372,53794449,53796013,53797592,53797795,53799081,53801620,53801842,53809273,53813073,53814620,53814935,53818819	Gene ID= ENSG00000068912.13 TPM= 32.89 Transcript Type= protein_coding
chr2	53970838	53975376	53970838	53975376	+	ENST00000606082.5@ACYP2	ENST00000606082.5	protein_coding	53970838,53973713,53975246	53971321,53973810,53975376	Gene ID= ENSG00000170634.12 TPM= 1.17 Transcript Type= protein_coding
chr2	54115275	54115897	54115275	54115897	-	transcript2072.chr2.nnic@NA	transcript2072.chr2.nnic	NA	54115275	54115897	Gene ID= novel_gene_chr2_2073 TPM= 2.34 Transcript Type= NA
chr2	54456280	54669675	54456280	54669675	+	transcript2074.chr2.nnic@SPTBN1	transcript2074.chr2.nnic	protein_coding	54456280,54526372,54599092,54612161,54616207,54617608,54618078,54621400,54622300,54623479,54624804,54625932,54628097,54628933,54629892,54630855,54632566,54637713,54642983,54644323,54645229,54645928,54646194,54647131,54648986,54649615,54653609,54655070,54655914,54657850,54659154,54659936,54661458,54664453,54665915,54667604,54668351	54456518,54526566,54599243,54612334,54616298,54617688,54618193,54621512,54622487,54623596,54624962,54626234,54628250,54629803,54630029,54631611,54632768,54637803,54643129,54644586,54645453,54646017,54646475,54647261,54649190,54649989,54653853,54655208,54655998,54658046,54659266,54659999,54663690,54664691,54666088,54667646,54669675	Gene ID= ENSG00000115306.15 TPM= 89.12 Transcript Type= NA
chr2	54557913	54669675	54557913	54669675	+	transcript2079.chr2.nic@SPTBN1	transcript2079.chr2.nic	protein_coding	54557913,54599092,54612161,54616207,54617608,54618078,54621400,54622300,54623479,54624804,54625932,54628097,54628933,54629892,54630855,54632566,54637713,54642983,54644323,54645229,54645928,54646194,54647131,54648986,54649615,54653609,54655070,54655914,54657850,54659154,54659936,54664453,54665915,54667604,54668351	54558887,54599243,54612334,54616298,54617688,54618193,54621512,54622487,54623596,54624962,54626234,54628250,54629803,54630029,54631611,54632768,54637803,54643129,54644586,54645453,54646017,54646475,54647261,54649190,54649989,54653853,54655208,54655998,54658046,54659266,54659999,54664691,54666088,54667646,54669675	Gene ID= ENSG00000115306.15 TPM= 43.59 Transcript Type= NA
chr2	54456280	54528715	54456280	54528715	+	transcript2095.chr2.nic@SPTBN1	transcript2095.chr2.nic	protein_coding	54456280,54526372	54456518,54528715	Gene ID= ENSG00000115306.15 TPM= 16.35 Transcript Type= NA
chr2	54456285	54669675	54456285	54669675	+	ENST00000356805.8@SPTBN1	ENST00000356805.8	protein_coding	54456285,54526372,54599092,54612161,54616207,54617608,54618078,54621400,54622300,54623479,54624804,54625932,54628097,54628933,54629892,54630855,54632566,54637713,54642983,54644323,54645229,54645928,54646194,54647131,54648986,54649615,54653609,54655070,54655914,54657850,54659154,54659936,54664453,54665915,54667604,54668351	54456518,54526566,54599243,54612334,54616298,54617688,54618193,54621512,54622487,54623596,54624962,54626234,54628250,54629803,54630029,54631611,54632768,54637803,54643129,54644586,54645453,54646017,54646475,54647261,54649190,54649989,54653853,54655208,54655998,54658046,54659266,54659999,54664691,54666088,54667646,54669675	Gene ID= ENSG00000115306.15 TPM= 348.33 Transcript Type= protein_coding
chr2	54576057	54579434	54576057	54579434	-	transcript2098.chr2.nnic@NA	transcript2098.chr2.nnic	NA	54576057	54579434	Gene ID= novel_gene_chr2_2099 TPM= 8.17 Transcript Type= NA
chr2	54972189	55050544	54972189	55050544	-	ENST00000357732.8@RTN4	ENST00000357732.8	protein_coding	55049745,55028164,54987491,54982515,54974695,54973821,54973563,54972189	55050544,55028220,54987698,54982653,54974764,54973867,54973621,54973198	Gene ID= ENSG00000115310.17 TPM= 20.29 Transcript Type= protein_coding
chr2	54972187	55010449	54972187	55010449	-	ENST00000394609.6@RTN4	ENST00000394609.6	protein_coding	55010087,54987491,54982515,54974695,54973821,54973563,54972187	55010449,54987698,54982653,54974764,54973867,54973621,54973198	Gene ID= ENSG00000115310.17 TPM= 32.84 Transcript Type= protein_coding
chr2	54972189	55050544	54972189	55050544	-	ENST00000317610.11@RTN4	ENST00000317610.11	protein_coding	55049745,54987491,54982515,54974695,54973821,54973563,54972189	55050544,54987698,54982653,54974764,54973867,54973621,54973198	Gene ID= ENSG00000115310.17 TPM= 260.82 Transcript Type= protein_coding
chr2	55232402	55235853	55232402	55235853	+	ENST00000272317.10@RPS27A	ENST00000272317.10	protein_coding	55232402,55232808,55233363,55234119,55234831,55235428	55232708,55232872,55233417,55234204,55234962,55235853	Gene ID= ENSG00000143947.13 TPM= 1.75 Transcript Type= protein_coding
chr2	55232678	55235755	55232678	55235755	+	ENST00000404735.1@RPS27A	ENST00000404735.1	protein_coding	55232678,55233363,55234119,55234831,55235428	55232872,55233417,55234204,55234962,55235755	Gene ID= ENSG00000143947.13 TPM= 5.25 Transcript Type= protein_coding
chr2	55236620	55269248	55236620	55269248	-	ENST00000263629.8@MTIF2	ENST00000263629.8	protein_coding	55269169,55268578,55267569,55263640,55262316,55254654,55254041,55252477,55249395,55246337,55244029,55243416,55242940,55240011,55237288,55236620	55269248,55268739,55267635,55263865,55262427,55254825,55254201,55252653,55249534,55246461,55244233,55243668,55243080,55240175,55237428,55236820	Gene ID= ENSG00000085760.14 TPM= 16.35 Transcript Type= protein_coding
chr2	55282319	55284472	55282319	55284472	+	ENST00000563365.1@PRORSD1P	ENST00000563365.1	transcribed_unitary_pseudogene	55282319	55284472	Gene ID= ENSG00000162997.15 TPM= 3.5 Transcript Type= processed_transcript
chr2	55334818	55419873	55334818	55419873	-	transcript2130.chr2.nic@CCDC88A	transcript2130.chr2.nic	protein_coding	55419017,55418816,55388778,55374814,55372452,55363950,55362308,55355579,55349518,55346175,55344368,55343648,55339464,55336681,55334818	55419873,55418916,55388886,55374883,55372510,55364033,55362448,55355751,55349599,55346333,55344514,55343792,55339648,55336818,55335164	Gene ID= ENSG00000115355.15 TPM= 2.34 Transcript Type= NA
chr2	55287842	55419856	55287842	55419856	-	ENST00000263630.12@CCDC88A	ENST00000263630.12	protein_coding	55419017,55418816,55388778,55374814,55372452,55363950,55362308,55355579,55349518,55346175,55344368,55343648,55339464,55336681,55334094,55332566,55328294,55322528,55318843,55317564,55317206,55315928,55312434,55309162,55308809,55301872,55301206,55299839,55296258,55295597,55291676,55287842	55419856,55418916,55388886,55374883,55372510,55364033,55362448,55355751,55349599,55346333,55344514,55343792,55339648,55336818,55335164,55332693,55328435,55322692,55319004,55317841,55317349,55316114,55312579,55309254,55309023,55302072,55301277,55299919,55296523,55296056,55291775,55291164	Gene ID= ENSG00000115355.15 TPM= 9.34 Transcript Type= protein_coding
chr2	55416908	55419942	55416908	55419942	-	transcript2137.chr2.nic@CCDC88A	transcript2137.chr2.nic	protein_coding	55419017,55416908	55419942,55418916	Gene ID= ENSG00000115355.15 TPM= 2.34 Transcript Type= NA
chr2	55548378	55617624	55548378	55617624	-	transcript2162.chr2.nnic@PPP4R3B	transcript2162.chr2.nnic	protein_coding	55617144,55615451,55603978,55588879,55586618,55585051,55581567,55579679,55577315,55573619,55568194,55564902,55564313,55558775,55548378	55617624,55615506,55604076,55588956,55586734,55585167,55581698,55579781,55577356,55573777,55568363,55565041,55564497,55558968,55550006	Gene ID= ENSG00000275052.4 TPM= 3.79 Transcript Type= NA
chr2	55613997	55617622	55613997	55617622	-	transcript2173.chr2.nic@PPP4R3B	transcript2173.chr2.nic	protein_coding	55617144,55613997	55617622,55615506	Gene ID= ENSG00000275052.4 TPM= 4.67 Transcript Type= NA
chr2	55614176	55618880	55614176	55618880	-	ENST00000612688.1@PPP4R3B	ENST00000612688.1	protein_coding	55618066,55617144,55614176	55618880,55617978,55615506	Gene ID= ENSG00000275052.4 TPM= 1.17 Transcript Type= processed_transcript
chr2	55548379	55617588	55548379	55617588	-	ENST00000616407.1@PPP4R3B	ENST00000616407.1	protein_coding	55617144,55615451,55603978,55598416,55588879,55586618,55585051,55581567,55579679,55578247,55577315,55573619,55568194,55564902,55564313,55558775,55548379	55617588,55615506,55604076,55599039,55588956,55586734,55585167,55581698,55579781,55578342,55577356,55573777,55568363,55565041,55564497,55558968,55550006	Gene ID= ENSG00000275052.4 TPM= 28.31 Transcript Type= protein_coding
chr2	55548378	55617608	55548378	55617608	-	ENST00000616288.4@PPP4R3B	ENST00000616288.4	protein_coding	55617144,55615451,55603978,55598416,55588879,55586618,55585051,55581567,55579679,55577315,55573619,55568194,55564902,55564313,55558775,55548378	55617608,55615506,55604076,55599039,55588956,55586734,55585167,55581698,55579781,55577356,55573777,55568363,55565041,55564497,55558968,55550006	Gene ID= ENSG00000275052.4 TPM= 27.15 Transcript Type= protein_coding
chr2	55634265	55693910	55634265	55693910	-	ENST00000447944.6@PNPT1	ENST00000447944.6	protein_coding	55693663,55687645,55686370,55684943,55683785,55680855,55680712,55679682,55672893,55671995,55671319,55667862,55666991,55661956,55660157,55656305,55656131,55654900,55647347,55646415,55646259,55645349,55644637,55643319,55643158,55640627,55637552,55634265	55693910,55687705,55686444,55685048,55683834,55680918,55680759,55679795,55673079,55672046,55671376,55667958,55667093,55662026,55660193,55656371,55656220,55654953,55647453,55646486,55646322,55645432,55644720,55643425,55643213,55640705,55637599,55636392	Gene ID= ENSG00000138035.14 TPM= 4.67 Transcript Type= protein_coding
chr2	55865967	55924139	55865967	55924139	-	ENST00000394555.6@EFEMP1	ENST00000394555.6	protein_coding	55923711,55922360,55918219,55917665,55881612,55877746,55876623,55874946,55871000,55870720,55865967	55924139,55922447,55918267,55918051,55881734,55877865,55876742,55875065,55871123,55870915,55867234	Gene ID= ENSG00000115380.19 TPM= 122.6 Transcript Type= protein_coding
chr2	56172664	56184950	56172664	56184950	-	transcript2237.chr2.nnic@AC007743.1	transcript2237.chr2.nnic	antisense_RNA	56184624,56177563,56172881,56172664	56184950,56177735,56176150,56172799	Gene ID= ENSG00000233251.7 TPM= 2.34 Transcript Type= NA
chr2	56172664	56184950	56172664	56184950	-	transcript2238.chr2.nnic@AC007743.1	transcript2238.chr2.nnic	antisense_RNA	56184624,56177563,56173040,56172664	56184950,56177735,56176150,56172799	Gene ID= ENSG00000233251.7 TPM= 3.5 Transcript Type= NA
chr2	56181852	56185048	56181852	56185048	-	transcript2246.chr2.nnic@NA	transcript2246.chr2.nnic	NA	56181852	56185048	Gene ID= novel_gene_chr2_2247 TPM= 2.34 Transcript Type= NA
chr2	56183819	56386171	56183819	56386171	+	transcript2234.chr2.nic@CCDC85A	transcript2234.chr2.nic	protein_coding	56183819,56192477,56342879,56384266	56184900,56193440,56342955,56386171	Gene ID= ENSG00000055813.5 TPM= 100.82 Transcript Type= NA
chr2	56183819	56386172	56183819	56386172	+	transcript2242.chr2.nnic@CCDC85A	transcript2242.chr2.nnic	protein_coding	56183819,56192477,56384266	56184900,56193440,56386172	Gene ID= ENSG00000055813.5 TPM= 30.77 Transcript Type= NA
chr2	58046800	58159871	58046800	58159871	+	transcript2256.chr2.nic@VRK2	transcript2256.chr2.nic	protein_coding	58046800,58048827,58058352,58084089,58084881,58086339,58088341,58089631,58123101,58131808,58135141,58139666,58146316,58159349	58046868,58048967,58058488,58084138,58084950,58086426,58088446,58089723,58123233,58131928,58135199,58139832,58146474,58159871	Gene ID= ENSG00000028116.16 TPM= 2.72 Transcript Type= NA
chr2	58046800	58159871	58046800	58159871	+	transcript2260.chr2.nnic@VRK2	transcript2260.chr2.nnic	protein_coding	58046800,58048827,58084089,58084881,58086339,58088341,58089631,58123101,58131808,58135141,58139666,58146316,58154759,58159349	58046868,58048967,58084138,58084950,58086426,58088446,58089723,58123233,58131928,58135199,58139832,58146474,58154802,58159871	Gene ID= ENSG00000028116.16 TPM= 3.89 Transcript Type= NA
chr2	58046824	58060670	58046824	58060670	+	transcript2277.chr2.nnic@VRK2	transcript2277.chr2.nnic	protein_coding	58046824,58048827,58057862	58046868,58048967,58060670	Gene ID= ENSG00000028116.16 TPM= 2.34 Transcript Type= NA
chr2	58046783	58052619	58046783	58052619	+	transcript2279.chr2.nic@VRK2	transcript2279.chr2.nic	protein_coding	58046783,58048827	58046868,58052619	Gene ID= ENSG00000028116.16 TPM= 3.5 Transcript Type= NA
chr2	58046691	58159871	58046691	58159871	+	ENST00000340157.8@VRK2	ENST00000340157.8	protein_coding	58046691,58048827,58084089,58084881,58086339,58088341,58089631,58123101,58131808,58135141,58139666,58146316,58159349	58046868,58048967,58084138,58084950,58086426,58088446,58089723,58123233,58131928,58135199,58139832,58146474,58159871	Gene ID= ENSG00000028116.16 TPM= 16.73 Transcript Type= protein_coding
chr2	58159247	58241350	58159247	58241350	-	ENST00000233741.8@FANCL	ENST00000233741.8	protein_coding	58241218,58232054,58229814,58226728,58221942,58204130,58198594,58165724,58163434,58163029,58162866,58161522,58160108,58159247	58241350,58232112,58229874,58226784,58222042,58204226,58198662,58165874,58163517,58163074,58162947,58161638,58160179,58159800	Gene ID= ENSG00000115392.11 TPM= 14.01 Transcript Type= protein_coding
chr2	58216854	58219170	58216854	58219170	+	transcript2280.chr2.nnic@NA	transcript2280.chr2.nnic	NA	58216854	58219170	Gene ID= novel_gene_chr2_2281 TPM= 14.01 Transcript Type= NA
chr2	60451167	60553567	60451167	60553567	-	ENST00000359629.9@BCL11A	ENST00000359629.9	protein_coding	60553216,60545971,60468732,60462282,60451167	60553567,60546300,60468833,60462424,60452666	Gene ID= ENSG00000119866.20 TPM= 8.17 Transcript Type= protein_coding
chr2	60460328	60553511	60460328	60553511	-	transcript2284.chr2.nnic@BCL11A	transcript2284.chr2.nnic	protein_coding	60553216,60545971,60468728,60460328	60553511,60546302,60468835,60462424	Gene ID= ENSG00000119866.20 TPM= 18.68 Transcript Type= NA
chr2	60457198	60553498	60457198	60553498	-	ENST00000335712.10@BCL11A	ENST00000335712.10	protein_coding	60553216,60545971,60468732,60457198	60553498,60546300,60468833,60462424	Gene ID= ENSG00000119866.20 TPM= 2.34 Transcript Type= protein_coding
chr2	60756230	60798963	60756230	60798963	+	ENST00000238714.7@PAPOLG	ENST00000238714.7	protein_coding	60756230,60760134,60761741,60768470,60768781,60770458,60771519,60775034,60779637,60780707,60781885,60782686,60783156,60786947,60787511,60791761,60792129,60793627,60793971,60794710,60794964,60797062	60756495,60760295,60761807,60768551,60768890,60770511,60771630,60775123,60779775,60780779,60782005,60782770,60783209,60787066,60787620,60791882,60792289,60793715,60794191,60794775,60795020,60798963	Gene ID= ENSG00000115421.12 TPM= 12.84 Transcript Type= protein_coding
chr2	60756256	60798468	60756256	60798468	+	transcript2291.chr2.nic@PAPOLG	transcript2291.chr2.nic	protein_coding	60756256,60760134,60761741,60768470,60768781,60770458,60771519,60775034,60779637,60780707,60781885,60782686,60783156,60786947,60787511,60791761,60792129,60793627,60793971,60794710,60794964,60797062	60756349,60760295,60761807,60768551,60768890,60770511,60771630,60775123,60779775,60780779,60782005,60782770,60783209,60787066,60787620,60791882,60792289,60793715,60794191,60794775,60795020,60798468	Gene ID= ENSG00000115421.12 TPM= 2.34 Transcript Type= NA
chr2	60777406	60780598	60777406	60780598	-	transcript2294.chr2.nnic@NA	transcript2294.chr2.nnic	NA	60777406	60780598	Gene ID= novel_gene_chr2_2295 TPM= 2.34 Transcript Type= NA
chr2	61009848	61018294	61009848	61018294	-	transcript2318.chr2.nic@PUS10	transcript2318.chr2.nic	protein_coding	61018008,61011765,61009848	61018294,61011905,61010888	Gene ID= ENSG00000162927.13 TPM= 2.34 Transcript Type= NA
chr2	61017493	61049254	61017493	61049254	+	transcript2309.chr2.nnic@PEX13	transcript2309.chr2.nnic	protein_coding	61017493,61021050,61031419,61045726,61048472	61017851,61022540,61032113,61045851,61049254	Gene ID= ENSG00000162928.8 TPM= 4.67 Transcript Type= NA
chr2	61017562	61019081	61017562	61019081	+	ENST00000401576.1@PEX13	ENST00000401576.1	protein_coding	61017562,61017696,61018184	61017615,61017851,61019081	Gene ID= ENSG00000162928.8 TPM= 2.34 Transcript Type= protein_coding
chr2	61017225	61019067	61017225	61019067	+	ENST00000444100.2@PEX13	ENST00000444100.2	protein_coding	61017225,61018162	61017851,61019067	Gene ID= ENSG00000162928.8 TPM= 2.34 Transcript Type= protein_coding
chr2	61053819	61055167	61053819	61055167	-	transcript2323.chr2.nnic@NA	transcript2323.chr2.nnic	NA	61053819	61055167	Gene ID= novel_gene_chr2_2324 TPM= 4.67 Transcript Type= NA
chr2	61065898	61124280	61065898	61124280	+	transcript2327.chr2.nnic@KIAA1841	transcript2327.chr2.nnic	protein_coding	61065898,61068849,61070342,61071606,61073458,61076920,61081452,61083154,61088159,61088358,61092464,61097700,61103853,61106563,61108317,61109197,61115979,61117357,61117467,61118028,61121185,61122126	61065987,61068985,61070500,61071792,61073551,61077158,61081510,61083314,61088245,61088468,61092587,61097852,61103998,61106662,61108349,61109296,61116070,61117385,61117540,61118116,61121276,61124280	Gene ID= ENSG00000162929.13 TPM= 2.34 Transcript Type= NA
chr2	61065879	61089670	61065879	61089670	+	transcript2332.chr2.nic@KIAA1841	transcript2332.chr2.nic	protein_coding	61065879,61068849,61070342,61071606,61073458,61076920,61081452,61083154,61088159,61088358	61066027,61068985,61070500,61071792,61073551,61077158,61081510,61083314,61088245,61089670	Gene ID= ENSG00000162929.13 TPM= 6.42 Transcript Type= NA
chr2	61065933	61124280	61065933	61124280	+	ENST00000402291.5@KIAA1841	ENST00000402291.5	protein_coding	61065933,61068849,61070342,61071606,61073458,61076920,61081452,61083154,61088159,61088358,61092464,61097700,61103853,61106563,61108317,61109197,61115979,61117357,61117467,61118028,61121185,61122126	61066027,61068985,61070500,61071792,61073551,61077158,61081510,61083314,61088245,61088468,61092587,61097852,61103998,61106662,61108349,61109296,61116070,61117385,61117540,61118116,61121276,61124280	Gene ID= ENSG00000162929.13 TPM= 6.42 Transcript Type= protein_coding
chr2	61145068	61164808	61145068	61164808	+	ENST00000426997.5@C2orf74	ENST00000426997.5	protein_coding	61145068,61162842,61163052,61164354	61145196,61162955,61163232,61164808	Gene ID= ENSG00000237651.6 TPM= 9.34 Transcript Type= protein_coding
chr2	61177418	61187551	61177418	61187551	+	ENST00000357022.6@AHSA2	ENST00000357022.6	protein_coding	61177418,61178981,61181320,61184712,61185502,61186446,61186617	61178384,61179171,61181405,61184800,61185618,61186497,61187551	Gene ID= ENSG00000173209.22 TPM= 2.34 Transcript Type= protein_coding
chr2	61177466	61186913	61177466	61186913	+	transcript2366.chr2.nic@AHSA2	transcript2366.chr2.nic	protein_coding	61177466,61181320,61184712,61185502,61186446,61186617	61179171,61181405,61184800,61186081,61186497,61186913	Gene ID= ENSG00000173209.22 TPM= 5.84 Transcript Type= NA
chr2	61213552	61218333	61213552	61218333	+	transcript2377.chr2.nnic@NA	transcript2377.chr2.nnic	NA	61213552	61218333	Gene ID= novel_gene_chr2_2378 TPM= 4.67 Transcript Type= NA
chr2	61417720	61470723	61417720	61470723	-	transcript2380.chr2.nic@USP34	transcript2380.chr2.nic	protein_coding	61470650,61417720	61470723,61420833	Gene ID= ENSG00000115464.14 TPM= 2.34 Transcript Type= NA
chr2	61366775	61369664	61366775	61369664	+	transcript2381.chr2.nnic@NA	transcript2381.chr2.nnic	NA	61366775	61369664	Gene ID= novel_gene_chr2_2382 TPM= 7.01 Transcript Type= NA
chr2	61388459	61393444	61388459	61393444	+	transcript2383.chr2.nnic@NA	transcript2383.chr2.nnic	NA	61388459	61393444	Gene ID= novel_gene_chr2_2384 TPM= 4.67 Transcript Type= NA
chr2	61471333	61483935	61471333	61483935	+	transcript2414.chr2.nnic@AC016727.1	transcript2414.chr2.nnic	antisense_RNA	61471333,61480325,61482627	61471808,61480583,61483935	Gene ID= ENSG00000270820.5 TPM= 2.34 Transcript Type= NA
chr2	61477934	61538286	61477934	61538286	-	transcript2393.chr2.nic@XPO1	transcript2393.chr2.nic	protein_coding	61537562,61534423,61533772,61526420,61522611,61502249,61501996,61499713,61498865,61498673,61496879,61495455,61493894,61492915,61492567,61492325,61492035,61490642,61488588,61488165,61485768,61483937,61482957,61482380,61481185,61477934	61538286,61534678,61533903,61526521,61522683,61502310,61502040,61499894,61498913,61498792,61497007,61495613,61494091,61493053,61492748,61492481,61492198,61490776,61488771,61488271,61485962,61484105,61483091,61482539,61481281,61478966	Gene ID= ENSG00000082898.16 TPM= 5.46 Transcript Type= NA
chr2	61477934	61538286	61477934	61538286	-	transcript2394.chr2.nic@XPO1	transcript2394.chr2.nic	protein_coding	61537562,61534558,61533772,61526420,61522611,61502249,61501996,61499713,61498865,61498673,61496879,61495455,61493894,61492915,61492567,61492325,61492035,61490642,61488588,61488165,61485768,61483937,61482957,61482380,61481185,61477934	61538286,61534678,61533903,61526521,61522683,61502310,61502040,61499894,61498913,61498792,61497007,61495613,61494091,61493053,61492748,61492481,61492198,61490776,61488771,61488271,61485962,61484105,61483091,61482539,61481281,61478966	Gene ID= ENSG00000082898.16 TPM= 5.46 Transcript Type= NA
chr2	61477934	61538368	61477934	61538368	-	transcript2405.chr2.nnic@XPO1	transcript2405.chr2.nnic	protein_coding	61537562,61533772,61526420,61522611,61502249,61501996,61499713,61498865,61498673,61496879,61495455,61493894,61492915,61492567,61492325,61492035,61488588,61488165,61485768,61483937,61482957,61482380,61481185,61477934	61538368,61533903,61526521,61522683,61502310,61502040,61499894,61498913,61498792,61497007,61495613,61494091,61493053,61492748,61492481,61492198,61488771,61488271,61485962,61484105,61483091,61482539,61481281,61478966	Gene ID= ENSG00000082898.16 TPM= 4.2 Transcript Type= NA
chr2	61868089	61888804	61868089	61888804	-	ENST00000394440.7@CCT4	ENST00000394440.7	protein_coding	61888381,61885020,61883459,61880286,61878869,61877393,61876920,61876095,61873197,61873002,61872458,61872082,61869440,61868089	61888804,61885072,61883548,61880394,61879011,61877514,61877052,61876234,61873293,61873112,61872588,61872316,61869553,61868706	Gene ID= ENSG00000115484.14 TPM= 15.18 Transcript Type= protein_coding
chr2	61905638	62149129	61905638	62149129	+	transcript2423.chr2.nnic@COMMD1	transcript2423.chr2.nnic	protein_coding	61905638,62000701,62135831,62146266	61905858,62000982,62135979,62149129	Gene ID= ENSG00000173163.10 TPM= 12.84 Transcript Type= NA
chr2	62196113	62224731	62196113	62224731	+	ENST00000301998.4@B3GNT2	ENST00000301998.4	protein_coding	62196113,62222212	62196355,62224731	Gene ID= ENSG00000170340.10 TPM= 170.47 Transcript Type= protein_coding
chr2	62500221	62506341	62500221	62506341	-	ENST00000335390.5@TMEM17	ENST00000335390.5	protein_coding	62506030,62502691,62502437,62500221	62506341,62502794,62502550,62501487	Gene ID= ENSG00000186889.9 TPM= 3.5 Transcript Type= protein_coding
chr2	62705673	63046487	62705673	63046487	+	transcript2431.chr2.nic@EHBP1	transcript2431.chr2.nic	protein_coding	62705673,62706897,62747395,62764266,62771339,62826087,62831019,62859169,62864731,62874346,62942718,62943802,62948260,62955517,62979188,62987931,62990716,62993530,62993871,62996643,63037535,63038743,63045066,63045410	62705736,62707295,62747452,62764361,62771392,62826268,62831158,62859291,62864971,62874532,62942896,62943850,62949162,62955660,62979335,62988038,62990840,62993668,62993977,62996766,63037634,63038816,63045180,63046487	Gene ID= ENSG00000115504.14 TPM= 5.84 Transcript Type= NA
chr2	62705742	63046487	62705742	63046487	+	ENST00000431489.5@EHBP1	ENST00000431489.5	protein_coding	62705742,62706897,62747395,62764266,62771339,62826087,62831019,62859169,62864731,62874346,62942718,62943802,62948260,62955517,62979188,62990716,62993530,62993871,62996643,63037535,63038743,63045066,63045410	62706052,62707295,62747452,62764361,62771392,62826268,62831158,62859291,62864971,62874532,62942896,62943850,62949162,62955660,62979335,62990840,62993668,62993977,62996766,63037634,63038816,63045180,63046487	Gene ID= ENSG00000115504.14 TPM= 4.67 Transcript Type= protein_coding
chr2	63121383	63588799	63121383	63588799	-	ENST00000272321.11@WDPCP	ENST00000272321.11	protein_coding	63588197,63492856,63487447,63486542,63484917,63484604,63439757,63437421,63433745,63404048,63381906,63378386,63313248,63259307,63174670,63153495,63152914,63121383	63588799,63492940,63487494,63486586,63484987,63484663,63439871,63437554,63433936,63404657,63382094,63378509,63313311,63259409,63174832,63153574,63152945,63122056	Gene ID= ENSG00000143951.15 TPM= 3.5 Transcript Type= protein_coding
chr2	63588609	63607197	63588609	63607197	+	ENST00000233114.12@MDH1	ENST00000233114.12	protein_coding	63588609,63594488,63595423,63597399,63599170,63604696,63605280,63605939,63606862	63589046,63594586,63595519,63597574,63599292,63604872,63605393,63606028,63607197	Gene ID= ENSG00000014641.17 TPM= 168.13 Transcript Type= protein_coding
chr2	63840955	63891561	63840955	63891561	+	transcript2486.chr2.nic@UGP2	transcript2486.chr2.nic	protein_coding	63840955,63856306,63857550,63857829,63882466,63883960,63885589,63886341,63887402,63890081,63891120	63841232,63856433,63857718,63857936,63882651,63884093,63885886,63886538,63887644,63890185,63891561	Gene ID= ENSG00000169764.15 TPM= 4.9 Transcript Type= NA
chr2	63841861	63891561	63841861	63891561	+	transcript2490.chr2.nic@UGP2	transcript2490.chr2.nic	protein_coding	63841861,63842539,63856306,63857829,63882466,63883960,63885589,63886341,63887402,63890081,63891120	63842204,63842599,63856433,63857936,63882651,63884093,63885886,63886538,63887644,63890185,63891561	Gene ID= ENSG00000169764.15 TPM= 14.63 Transcript Type= NA
chr2	63840940	63891562	63840940	63891562	+	ENST00000394417.6@UGP2	ENST00000394417.6	protein_coding	63840940,63856306,63857829,63882466,63883960,63885589,63886341,63887402,63890081,63891120	63841232,63856433,63857936,63882651,63884093,63885886,63886538,63887644,63890185,63891562	Gene ID= ENSG00000169764.15 TPM= 125.55 Transcript Type= protein_coding
chr2	63841710	63891562	63841710	63891562	+	ENST00000337130.9@UGP2	ENST00000337130.9	protein_coding	63841710,63856306,63857829,63882466,63883960,63885589,63886341,63887402,63890081,63891120	63842204,63856433,63857936,63882651,63884093,63885886,63886538,63887644,63890185,63891562	Gene ID= ENSG00000169764.15 TPM= 54.33 Transcript Type= protein_coding
chr2	63892146	64019407	63892146	64019407	-	transcript2449.chr2.nnic@VPS54	transcript2449.chr2.nnic	protein_coding	64019300,64018938,63983864,63981646,63972166,63968957,63965835,63962058,63949037,63947383,63944600,63942465,63933673,63921206,63920446,63919883,63916900,63914182,63913223,63912540,63912345,63899474,63897496,63892146	64019407,64019168,63984019,63981887,63972244,63968991,63965966,63962443,63949163,63947490,63944655,63942561,63934013,63921335,63920627,63919995,63916963,63914287,63913310,63912661,63912425,63899581,63897590,63893535	Gene ID= ENSG00000143952.19 TPM= 5.25 Transcript Type= NA
chr2	63892146	64019444	63892146	64019444	-	transcript2471.chr2.nic@VPS54	transcript2471.chr2.nic	protein_coding	64018938,63983864,63981646,63972166,63968957,63965835,63962058,63949037,63944600,63942465,63933673,63921206,63920446,63919883,63916900,63914182,63913223,63912540,63912345,63899474,63897496,63892146	64019444,63984019,63981851,63972244,63968991,63965966,63962443,63949163,63944655,63942561,63934013,63921335,63920627,63919995,63916963,63914287,63913310,63912661,63912425,63899581,63897590,63893535	Gene ID= ENSG00000143952.19 TPM= 2.92 Transcript Type= NA
chr2	63948415	64019437	63948415	64019437	-	transcript2498.chr2.nic@VPS54	transcript2498.chr2.nic	protein_coding	64018938,63983864,63981646,63972166,63968957,63965835,63962058,63948415	64019437,63984019,63981851,63972244,63968991,63965966,63962443,63949163	Gene ID= ENSG00000143952.19 TPM= 3.5 Transcript Type= NA
chr2	63963468	63967733	63963468	63967733	+	transcript2500.chr2.nnic@NA	transcript2500.chr2.nnic	NA	63963468	63967733	Gene ID= novel_gene_chr2_2501 TPM= 4.67 Transcript Type= NA
chr2	64092859	64144396	64092859	64144396	-	transcript2504.chr2.nic@PELI1	transcript2504.chr2.nic	protein_coding	64144081,64108240,64104701,64104554,64100398,64096413,64096125,64092859	64144396,64108379,64104830,64104597,64100499,64096610,64096313,64095268	Gene ID= ENSG00000197329.11 TPM= 2.34 Transcript Type= NA
chr2	64104682	64144396	64104682	64144396	-	transcript2507.chr2.nic@PELI1	transcript2507.chr2.nic	protein_coding	64144081,64104682	64144396,64108379	Gene ID= ENSG00000197329.11 TPM= 2.34 Transcript Type= NA
chr2	64454157	64461381	64454157	64461381	+	transcript2508.chr2.nnic@LGALSL	transcript2508.chr2.nnic	protein_coding	64454157,64454459,64455344,64455589,64456288,64458285	64454343,64454581,64455415,64455677,64456465,64461381	Gene ID= ENSG00000119862.12 TPM= 26.85 Transcript Type= NA
chr2	64524292	64592134	64524292	64592134	+	transcript2514.chr2.nic@AFTPH	transcript2514.chr2.nic	protein_coding	64524292,64551443,64567562,64569092,64569623,64572946,64579486,64581190,64585422,64591885	64524612,64553409,64567713,64569218,64569679,64573068,64579546,64581273,64585545,64592134	Gene ID= ENSG00000119844.15 TPM= 5.84 Transcript Type= NA
chr2	64524292	64592997	64524292	64592997	+	transcript2520.chr2.nic@AFTPH	transcript2520.chr2.nic	protein_coding	64524292,64551443,64567562,64569092,64569623,64572946,64579486,64585422,64591888	64524612,64553409,64567713,64569218,64569679,64573068,64579546,64585545,64592997	Gene ID= ENSG00000119844.15 TPM= 4.67 Transcript Type= NA
chr2	64524351	64592134	64524351	64592134	+	transcript2521.chr2.nic@AFTPH	transcript2521.chr2.nic	protein_coding	64524351,64551443,64567562,64569092,64569623,64572946,64585422,64591885	64524612,64553409,64567713,64569218,64569679,64573068,64585545,64592134	Gene ID= ENSG00000119844.15 TPM= 5.84 Transcript Type= NA
chr2	64524350	64553719	64524350	64553719	+	transcript2531.chr2.nic@AFTPH	transcript2531.chr2.nic	protein_coding	64524350,64551443	64524612,64553719	Gene ID= ENSG00000119844.15 TPM= 3.5 Transcript Type= NA
chr2	64524305	64593005	64524305	64593005	+	ENST00000238856.8@AFTPH	ENST00000238856.8	protein_coding	64524305,64551443,64567562,64569092,64569623,64572946,64579486,64585422,64591885	64524612,64553409,64567713,64569218,64569679,64573068,64579546,64585545,64593005	Gene ID= ENSG00000119844.15 TPM= 15.18 Transcript Type= protein_coding
chr2	64524305	64592997	64524305	64592997	+	ENST00000238855.11@AFTPH	ENST00000238855.11	protein_coding	64524305,64551443,64567562,64569092,64569623,64572946,64579486,64581190,64585422,64591888	64524612,64553409,64567713,64569218,64569679,64573068,64579546,64581273,64585545,64592997	Gene ID= ENSG00000119844.15 TPM= 2.34 Transcript Type= protein_coding
chr2	64552512	64592132	64552512	64592132	+	ENST00000409183.5@AFTPH	ENST00000409183.5	protein_coding	64552512,64567562,64569092,64569623,64572946,64579486,64581190,64585422,64591885	64553409,64567713,64569218,64569679,64573068,64579546,64581273,64585545,64592132	Gene ID= ENSG00000119844.15 TPM= 1.17 Transcript Type= protein_coding
chr2	64524359	64527591	64524359	64527591	+	transcript2532.chr2.nnic@NA	transcript2532.chr2.nnic	NA	64524359	64527591	Gene ID= novel_gene_chr2_2533 TPM= 3.5 Transcript Type= NA
chr2	64643372	64647688	64643372	64647688	+	transcript2534.chr2.nnic@NA	transcript2534.chr2.nnic	NA	64643372	64647688	Gene ID= novel_gene_chr2_2535 TPM= 2.34 Transcript Type= NA
chr2	64989401	65023865	64989401	65023865	+	ENST00000234256.3@SLC1A4	ENST00000234256.3	protein_coding	64989401,65001448,65003953,65010597,65016440,65018071,65018545,65020912	64990170,65001490,65004015,65010763,65016673,65018265,65018679,65023865	Gene ID= ENSG00000115902.10 TPM= 21.02 Transcript Type= protein_coding
chr2	65056372	65087004	65056372	65087004	+	ENST00000377990.6@CEP68	ENST00000377990.6	protein_coding	65056372,65069399,65071454,65074282,65077868,65082536,65083639	65056528,65069801,65072980,65074404,65077964,65082709,65087004	Gene ID= ENSG00000011523.13 TPM= 23.35 Transcript Type= protein_coding
chr2	65058499	65061515	65058499	65061515	-	transcript2570.chr2.nnic@NA	transcript2570.chr2.nnic	NA	65058499	65061515	Gene ID= novel_gene_chr2_2571 TPM= 7.01 Transcript Type= NA
chr2	65086855	65130106	65086855	65130106	-	ENST00000409784.7@RAB1A	ENST00000409784.7	protein_coding	65129893,65104734,65097971,65090983,65088939,65086855	65130106,65104806,65098066,65091078,65089070,65088690	Gene ID= ENSG00000138069.16 TPM= 39.7 Transcript Type= protein_coding
chr2	65087871	65130101	65087871	65130101	-	ENST00000398529.7@RAB1A	ENST00000398529.7	protein_coding	65129893,65104734,65097971,65087871	65130101,65104806,65098066,65088690	Gene ID= ENSG00000138069.16 TPM= 3.5 Transcript Type= protein_coding
chr2	65081074	65081752	65081074	65081752	+	transcript2568.chr2.nnic@NA	transcript2568.chr2.nnic	NA	65081074	65081752	Gene ID= novel_gene_chr2_2569 TPM= 2.34 Transcript Type= NA
chr2	65120721	65122406	65120721	65122406	+	transcript2566.chr2.nnic@NA	transcript2566.chr2.nnic	NA	65120721	65122406	Gene ID= novel_gene_chr2_2567 TPM= 3.5 Transcript Type= NA
chr2	65227753	65271253	65227753	65271253	+	ENST00000260641.9@ACTR2	ENST00000260641.9	protein_coding	65227753,65239852,65246524,65251027,65253728,65255545,65261247,65265043,65268564	65227957,65239962,65246739,65251099,65253864,65255694,65261392,65265175,65271253	Gene ID= ENSG00000138071.13 TPM= 154.12 Transcript Type= protein_coding
chr2	65227837	65270146	65227837	65270146	+	ENST00000377982.8@ACTR2	ENST00000377982.8	protein_coding	65227837,65239852,65242049,65246524,65251027,65253728,65255545,65261247,65265043,65268564	65227957,65239962,65242063,65246739,65251099,65253864,65255694,65261392,65265175,65270146	Gene ID= ENSG00000138071.13 TPM= 3.5 Transcript Type= protein_coding
chr2	65310851	65432177	65310851	65432177	-	ENST00000356388.8@SPRED2	ENST00000356388.8	protein_coding	65431962,65344719,65334605,65331987,65316734,65310851	65432177,65344896,65334773,65332051,65316883,65314169	Gene ID= ENSG00000198369.9 TPM= 22.18 Transcript Type= protein_coding
chr2	65426638	65430876	65426638	65430876	+	transcript2586.chr2.nnic@NA	transcript2586.chr2.nnic	NA	65426638	65430876	Gene ID= novel_gene_chr2_2587 TPM= 3.5 Transcript Type= NA
chr2	66435291	66467591	66435291	66467591	+	transcript2598.chr2.nnic@MEIS1	transcript2598.chr2.nnic	protein_coding	66435291,66437737,66439843,66440562,66441414,66442902,66464107	66435872,66437963,66439984,66440612,66441468,66443048,66467591	Gene ID= ENSG00000143995.19 TPM= 8.17 Transcript Type= NA
chr2	67397319	67410545	67397319	67410545	+	ENST00000272342.5@ETAA1	ENST00000272342.5	protein_coding	67397319,67399169,67399550,67402862,67403225,67409911	67397671,67399297,67399626,67402974,67405335,67410545	Gene ID= ENSG00000143971.7 TPM= 1.17 Transcript Type= protein_coding
chr2	68129803	68157560	68129803	68157560	-	ENST00000295121.10@WDR92	ENST00000295121.10	protein_coding	68157261,68147467,68144585,68141694,68138742,68137299,68134702,68129803	68157560,68147567,68144715,68141795,68138857,68137433,68134799,68131445	Gene ID= ENSG00000243667.6 TPM= 3.5 Transcript Type= protein_coding
chr2	68157844	68176238	68157844	68176238	+	ENST00000263657.6@PNO1	ENST00000263657.6	protein_coding	68157844,68158380,68161683,68162265,68162546,68173347,68174735	68158141,68158529,68161766,68162325,68162663,68173417,68176238	Gene ID= ENSG00000115946.7 TPM= 3.5 Transcript Type= protein_coding
chr2	68178857	68252531	68178857	68252531	-	ENST00000234310.7@PPP3R1	ENST00000234310.7	protein_coding	68252125,68217092,68188514,68187255,68186468,68178857	68252531,68217131,68188690,68187314,68186652,68181010	Gene ID= ENSG00000221823.10 TPM= 10.51 Transcript Type= protein_coding
chr2	68293010	68319973	68293010	68319973	-	transcript2635.chr2.nic@CNRIP1	transcript2635.chr2.nic	protein_coding	68319772,68319222,68317157,68293010	68319973,68319466,68317307,68294026	Gene ID= ENSG00000119865.8 TPM= 13.04 Transcript Type= NA
chr2	68293010	68320006	68293010	68320006	-	ENST00000263655.3@CNRIP1	ENST00000263655.3	protein_coding	68319222,68317157,68293010	68320006,68317307,68294026	Gene ID= ENSG00000119865.8 TPM= 49.24 Transcript Type= protein_coding
chr2	68293010	68319963	68293010	68319963	-	transcript2639.chr2.nnic@CNRIP1	transcript2639.chr2.nnic	protein_coding	68319254,68317157,68293010	68319963,68317307,68294026	Gene ID= ENSG00000119865.8 TPM= 4.29 Transcript Type= NA
chr2	68365173	68397453	68365173	68397453	+	ENST00000234313.7@PLEK	ENST00000234313.7	protein_coding	68365173,68380328,68380723,68382542,68386502,68388387,68393162,68394107,68395680	68365393,68380483,68380904,68382633,68386686,68388491,68393245,68394176,68397453	Gene ID= ENSG00000115956.9 TPM= 85.23 Transcript Type= protein_coding
chr2	68462179	68465550	68462179	68465550	-	transcript2649.chr2.nic@FBXO48	transcript2649.chr2.nic	protein_coding	68464840,68462179	68465550,68464370	Gene ID= ENSG00000204923.3 TPM= 4.67 Transcript Type= NA
chr2	68467561	68580162	68467561	68580162	+	ENST00000303795.8@APLF	ENST00000303795.8	protein_coding	68467561,68490190,68502731,68513080,68513548,68526061,68537872,68545187,68567341,68577820	68467827,68490261,68502903,68513227,68513680,68526242,68538227,68545312,68567387,68580162	Gene ID= ENSG00000169621.9 TPM= 2.34 Transcript Type= protein_coding
chr2	68679639	68826833	68679639	68826833	+	transcript2654.chr2.nic@ARHGAP25	transcript2654.chr2.nic	protein_coding	68679639,68710505,68775221,68782233,68787840,68807273,68813287,68816289,68817873,68819123,68822340,68825987	68680095,68710698,68775420,68782320,68787956,68807480,68813419,68816362,68817994,68819319,68822872,68826833	Gene ID= ENSG00000163219.11 TPM= 7.39 Transcript Type= NA
chr2	68774937	68826833	68774937	68826833	+	transcript2658.chr2.nic@ARHGAP25	transcript2658.chr2.nic	protein_coding	68774937,68782233,68787840,68807273,68813287,68816289,68817873,68819123,68822340,68825987	68775772,68782320,68787956,68807480,68813419,68816362,68817994,68819319,68822872,68826833	Gene ID= ENSG00000163219.11 TPM= 3.5 Transcript Type= NA
chr2	68796545	68826833	68796545	68826833	+	transcript2662.chr2.nnic@ARHGAP25	transcript2662.chr2.nnic	protein_coding	68796545,68807273,68813287,68816289,68817873,68819123,68822340,68825987	68796760,68807480,68813419,68816362,68817994,68819319,68822872,68826833	Gene ID= ENSG00000163219.11 TPM= 3.5 Transcript Type= NA
chr2	68734835	68826833	68734835	68826833	+	ENST00000409202.7@ARHGAP25	ENST00000409202.7	protein_coding	68734835,68775221,68782233,68787840,68807273,68813287,68816289,68817873,68819123,68822340,68825987	68735260,68775420,68782320,68787956,68807480,68813419,68816362,68817994,68819319,68822872,68826833	Gene ID= ENSG00000163219.11 TPM= 10.89 Transcript Type= protein_coding
chr2	68774801	68826833	68774801	68826833	+	ENST00000409220.5@ARHGAP25	ENST00000409220.5	protein_coding	68774801,68782233,68787840,68807273,68813287,68816289,68817873,68819123,68822340,68825987	68775420,68782320,68787956,68807480,68813419,68816362,68817994,68819319,68822872,68826833	Gene ID= ENSG00000163219.11 TPM= 21.4 Transcript Type= protein_coding
chr2	68945232	68952970	68945232	68952970	-	ENST00000328895.8@GKN2	ENST00000328895.8	protein_coding	68952850,68950702,68950126,68947147,68946304,68945232	68952970,68950755,68950263,68947257,68946460,68945450	Gene ID= ENSG00000183607.9 TPM= 37.36 Transcript Type= protein_coding
chr2	69013178	69249327	69013178	69249327	+	ENST00000303714.8@ANTXR1	ENST00000303714.8	protein_coding	69013178,69040044,69044742,69070647,69071754,69073022,69075590,69077408,69090859,69102842,69123017,69124565,69152169,69170248,69181786,69182493,69193335,69245225	69013651,69040115,69044813,69070728,69071787,69073101,69075658,69077488,69090919,69102940,69123086,69124643,69152264,69170289,69181881,69182660,69193415,69249327	Gene ID= ENSG00000169604.19 TPM= 14.01 Transcript Type= protein_coding
chr2	69315213	69319103	69315213	69319103	-	transcript2673.chr2.nnic@NA	transcript2673.chr2.nnic	NA	69315213	69319103	Gene ID= novel_gene_chr2_2674 TPM= 2.34 Transcript Type= NA
chr2	69643093	69643845	69643093	69643845	-	ENST00000492192.1@AAK1	ENST00000492192.1	protein_coding	69643575,69643093	69643845,69643274	Gene ID= ENSG00000115977.18 TPM= 8.17 Transcript Type= processed_transcript
chr2	69643806	69826461	69643806	69826461	+	transcript2697.chr2.nic@ANXA4	transcript2697.chr2.nic	protein_coding	69643806,69652998,69720774,69781520,69788054,69804533,69806385,69807906,69810594,69812653,69816101,69818599,69819280,69820699,69825456	69644905,69653282,69720871,69781574,69788141,69804627,69806498,69807996,69810673,69812709,69816194,69818694,69819338,69820821,69826461	Gene ID= ENSG00000196975.15 TPM= 11.68 Transcript Type= NA
chr2	69742131	69825781	69742131	69825781	+	transcript2700.chr2.nnic@ANXA4	transcript2700.chr2.nnic	protein_coding	69742131,69763034,69781520,69788054,69804533,69806385,69807906,69810594,69812653,69816101,69818599,69819280,69820699,69825456	69742175,69763076,69781574,69788141,69804627,69806498,69807996,69810673,69812709,69816194,69818694,69819338,69820821,69825781	Gene ID= ENSG00000196975.15 TPM= 8.17 Transcript Type= NA
chr2	69829642	69881396	69829642	69881396	+	ENST00000282570.3@GMCL1	ENST00000282570.3	protein_coding	69829642,69837547,69839457,69840942,69843149,69844131,69847543,69849652,69854823,69861278,69864900,69869719,69871745,69878909	69830152,69837670,69839553,69841039,69843261,69844196,69847627,69849742,69854960,69861347,69864975,69869864,69871832,69881396	Gene ID= ENSG00000087338.4 TPM= 35.03 Transcript Type= protein_coding
chr2	69893560	69905217	69893560	69905217	+	ENST00000244227.7@SNRNP27	ENST00000244227.7	protein_coding	69893560,69895094,69896436,69897377,69903181,69904254	69894018,69895214,69896548,69897456,69903245,69905217	Gene ID= ENSG00000124380.10 TPM= 4.67 Transcript Type= protein_coding
chr2	69893959	69905218	69893959	69905218	+	ENST00000409116.5@SNRNP27	ENST00000409116.5	protein_coding	69893959,69895094,69896436,69897377,69904254	69894018,69895214,69896548,69897456,69905218	Gene ID= ENSG00000124380.10 TPM= 1.17 Transcript Type= protein_coding
chr2	69893964	69904671	69893964	69904671	+	ENST00000450162.6@SNRNP27	ENST00000450162.6	protein_coding	69893964,69895094,69896436,69897377,69903181,69904254,69904512	69894018,69895214,69896548,69897456,69903245,69904425,69904671	Gene ID= ENSG00000124380.10 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr2	69906300	69909458	69906300	69909458	+	transcript2746.chr2.nnic@NA	transcript2746.chr2.nnic	NA	69906300	69909458	Gene ID= novel_gene_chr2_2747 TPM= 43.2 Transcript Type= NA
chr2	69915071	69923055	69915071	69923055	+	transcript2748.chr2.nic@MXD1	transcript2748.chr2.nic	protein_coding	69915071,69916121,69921736	69915403,69916220,69923055	Gene ID= ENSG00000059728.10 TPM= 2.34 Transcript Type= NA
chr2	70045259	70087012	70045259	70087012	-	transcript2781.chr2.nic@PCBP1-AS1	transcript2781.chr2.nic	processed_transcript	70085547,70083538,70051203,70045259	70087012,70083687,70051305,70046796	Gene ID= ENSG00000179818.13 TPM= 2.34 Transcript Type= NA
chr2	70087454	70089203	70087454	70089203	+	ENST00000303577.6@PCBP1	ENST00000303577.6	protein_coding	70087454	70089203	Gene ID= ENSG00000169564.6 TPM= 715.73 Transcript Type= protein_coding
chr2	70149880	70190972	70149880	70190972	-	transcript2796.chr2.nic@C2orf42	transcript2796.chr2.nic	protein_coding	70190691,70182667,70181163,70179532,70175673,70169557,70165528,70165092,70160625,70149880	70190972,70182935,70181997,70179642,70175777,70169661,70165635,70165192,70160787,70150564	Gene ID= ENSG00000115998.7 TPM= 2.34 Transcript Type= NA
chr2	70149880	70191019	70149880	70191019	-	transcript2797.chr2.nic@C2orf42	transcript2797.chr2.nic	protein_coding	70190918,70182667,70181163,70179532,70175673,70169557,70165528,70165092,70160625,70149880	70191019,70182935,70181997,70179642,70175777,70169661,70165635,70165192,70160787,70150564	Gene ID= ENSG00000115998.7 TPM= 5.84 Transcript Type= NA
chr2	70149880	70191071	70149880	70191071	-	ENST00000264434.6@C2orf42	ENST00000264434.6	protein_coding	70190973,70182667,70181163,70179532,70175673,70169557,70165528,70165092,70160625,70149880	70191071,70182935,70181997,70179642,70175777,70169661,70165635,70165192,70160787,70150564	Gene ID= ENSG00000115998.7 TPM= 2.34 Transcript Type= protein_coding
chr2	70211682	70248633	70211682	70248633	-	transcript2825.chr2.nic@TIA1	transcript2825.chr2.nic	protein_coding	70248405,70236079,70230756,70229264,70227735,70224554,70216886,70216404,70216208,70215371,70214349,70211682	70248633,70236175,70230854,70229318,70229091,70224629,70216994,70216499,70216292,70215494,70214494,70212845	Gene ID= ENSG00000116001.15 TPM= 2.34 Transcript Type= NA
chr2	70209444	70248660	70209444	70248660	-	ENST00000415783.6@TIA1	ENST00000415783.6	protein_coding	70248405,70236079,70230756,70229264,70227735,70224554,70216886,70216404,70216208,70215371,70214349,70209444	70248660,70236175,70230854,70229318,70227822,70224629,70216994,70216499,70216292,70215494,70214494,70212845	Gene ID= ENSG00000116001.15 TPM= 5.84 Transcript Type= protein_coding
chr2	70210204	70248580	70210204	70248580	-	ENST00000282574.8@TIA1	ENST00000282574.8	protein_coding	70248405,70236079,70230756,70229264,70229059,70227735,70224554,70216886,70216404,70216208,70215371,70214349,70210204	70248580,70236175,70230854,70229318,70229091,70227822,70224629,70216994,70216499,70216292,70215494,70214491,70212845	Gene ID= ENSG00000116001.15 TPM= 9.34 Transcript Type= protein_coding
chr2	70258137	70281191	70258137	70281191	+	ENST00000433351.6@PCYOX1	ENST00000433351.6	protein_coding	70258137,70259360,70261212,70274959,70275514,70276734	70258276,70259566,70261386,70275170,70275666,70281191	Gene ID= ENSG00000116005.11 TPM= 99.25 Transcript Type= protein_coding
chr2	70281362	70293771	70281362	70293771	-	ENST00000272348.6@SNRPG	ENST00000272348.6	protein_coding	70293618,70289350,70288068,70281362	70293771,70289372,70288192,70281684	Gene ID= ENSG00000143977.13 TPM= 49.04 Transcript Type= protein_coding
chr2	70281367	70293740	70281367	70293740	-	ENST00000429728.1@SNRPG	ENST00000429728.1	protein_coding	70293618,70288068,70281367	70293740,70288192,70281684	Gene ID= ENSG00000143977.13 TPM= 2.34 Transcript Type= processed_transcript
chr2	70291950	70293715	70291950	70293715	-	transcript2851.chr2.nnic@NA	transcript2851.chr2.nnic	NA	70291950	70293715	Gene ID= novel_gene_chr2_2852 TPM= 3.5 Transcript Type= NA
chr2	70295976	70302090	70295976	70302090	-	transcript2854.chr2.nnic@FAM136A	transcript2854.chr2.nnic	protein_coding	70301925,70301522,70300840,70295976	70302090,70301603,70300980,70297477	Gene ID= ENSG00000035141.7 TPM= 10.12 Transcript Type= NA
chr2	70295975	70302090	70295975	70302090	-	ENST00000037869.7@FAM136A	ENST00000037869.7	protein_coding	70301925,70300840,70295975	70302090,70300980,70297477	Gene ID= ENSG00000035141.7 TPM= 49.82 Transcript Type= protein_coding
chr2	70295976	70302056	70295976	70302056	-	ENST00000460307.1@FAM136A	ENST00000460307.1	protein_coding	70301925,70300840,70295976	70302056,70301603,70297477	Gene ID= ENSG00000035141.7 TPM= 4.29 Transcript Type= retained_intron
chr2	70656784	70768177	70656784	70768177	-	ENST00000264436.8@ADD2	ENST00000264436.8	protein_coding	70767886,70713066,70706226,70704321,70696245,70695721,70692403,70690786,70688024,70683591,70678704,70677758,70676796,70674678,70672878,70656784	70768177,70713184,70706442,70704459,70696396,70695801,70692552,70690929,70688122,70683767,70678961,70677877,70676885,70674825,70673006,70663735	Gene ID= ENSG00000075340.22 TPM= 1.17 Transcript Type= protein_coding
chr2	70675093	70768212	70675093	70768212	-	ENST00000413157.6@ADD2	ENST00000413157.6	protein_coding	70767886,70713066,70706226,70704321,70696245,70695721,70692403,70690786,70688024,70683591,70678704,70677758,70675093	70768212,70713184,70706442,70704459,70696396,70695801,70692552,70690929,70688122,70683767,70678961,70677877,70676885	Gene ID= ENSG00000075340.22 TPM= 1.17 Transcript Type= protein_coding
chr2	70819833	70824035	70819833	70824035	+	transcript2888.chr2.nnic@NA	transcript2888.chr2.nnic	NA	70819833	70824035	Gene ID= novel_gene_chr2_2889 TPM= 2.34 Transcript Type= NA
chr2	70830214	70835822	70830214	70835822	-	ENST00000410009.4@CD207	ENST00000410009.4	protein_coding	70835704,70835491,70833646,70832900,70831701,70830214	70835822,70835607,70834020,70833051,70831819,70831200	Gene ID= ENSG00000116031.8 TPM= 4.67 Transcript Type= protein_coding
chr2	70935882	70965397	70935882	70965397	+	ENST00000234396.8@ATP6V1B1	ENST00000234396.8	protein_coding	70935882,70943658,70958046,70958333,70959018,70959939,70960921,70961596,70962777,70963162,70963572,70964438,70964736,70964958	70936072,70943713,70958144,70958426,70959095,70960078,70961022,70961693,70962900,70963312,70963654,70964542,70964865,70965397	Gene ID= ENSG00000116039.11 TPM= 1.17 Transcript Type= protein_coding
chr2	70985938	70994945	70985938	70994945	-	ENST00000272438.8@TEX261	ENST00000272438.8	protein_coding	70994688,70993696,70991830,70989749,70988915,70985938	70994945,70993775,70991983,70989816,70989017,70988715	Gene ID= ENSG00000144043.11 TPM= 161.13 Transcript Type= protein_coding
chr2	71068278	71078641	71068278	71078641	+	transcript2891.chr2.nic@NAGK	transcript2891.chr2.nic	protein_coding	71068278,71070502,71070741,71071686,71072641,71073482,71075555,71076604,71077558,71078318	71068336,71070586,71070839,71071827,71072751,71073594,71075642,71076701,71077636,71078641	Gene ID= ENSG00000124357.12 TPM= 6.13 Transcript Type= NA
chr2	71068278	71078868	71068278	71078868	+	ENST00000613852.4@NAGK	ENST00000613852.4	protein_coding	71068278,71070502,71070741,71071686,71072641,71073482,71075555,71076604,71077558,71078318	71068712,71070586,71070839,71071827,71072751,71073594,71075642,71076701,71077636,71078868	Gene ID= ENSG00000124357.12 TPM= 75.89 Transcript Type= protein_coding
chr2	71068649	71078641	71068649	71078641	+	transcript2895.chr2.nnic@NAGK	transcript2895.chr2.nnic	protein_coding	71068649,71070502,71070741,71071686,71072641,71073482,71075555,71076604,71077558,71078318	71068841,71070586,71070839,71071827,71072751,71073594,71075642,71076701,71077636,71078641	Gene ID= ENSG00000124357.12 TPM= 2.63 Transcript Type= NA
chr2	71068588	71079805	71068588	71079805	+	ENST00000418807.7@NAGK	ENST00000418807.7	protein_coding	71068588,71070741,71071686,71072641,71073482,71075555,71076604,71077558,71078318	71068712,71070839,71071827,71072751,71073594,71075642,71076701,71077636,71079805	Gene ID= ENSG00000124357.12 TPM= 1.17 Transcript Type= protein_coding
chr2	71068619	71078641	71068619	71078641	+	ENST00000443938.6@NAGK	ENST00000443938.6	protein_coding	71068619,71070502,71070741,71071686,71072641,71073482,71075555,71076604,71077570,71078318	71068712,71070586,71070839,71071827,71072751,71073594,71075642,71076701,71077636,71078641	Gene ID= ENSG00000124357.12 TPM= 69.18 Transcript Type= protein_coding
chr2	71068650	71078636	71068650	71078636	+	ENST00000475709.5@NAGK	ENST00000475709.5	protein_coding	71068650,71070741,71071686,71072641,71073482,71075555,71076604,71077558,71078318	71070586,71070839,71071827,71072751,71073594,71075642,71076701,71077636,71078636	Gene ID= ENSG00000124357.12 TPM= 7.3 Transcript Type= retained_intron
chr2	71068665	71078620	71068665	71078620	+	ENST00000472519.5@NAGK	ENST00000472519.5	protein_coding	71068665,71070502,71070741,71071686,71072641,71075555,71077558,71078318	71068712,71070586,71070839,71071827,71073594,71076701,71077636,71078620	Gene ID= ENSG00000124357.12 TPM= 2.34 Transcript Type= retained_intron
chr2	71109684	71130246	71109684	71130246	-	transcript2904.chr2.nic@MCEE	transcript2904.chr2.nic	protein_coding	71129717,71124206,71109684	71130246,71124543,71110122	Gene ID= ENSG00000124370.10 TPM= 3.5 Transcript Type= NA
chr2	71109684	71130237	71109684	71130237	-	ENST00000244217.5@MCEE	ENST00000244217.5	protein_coding	71130180,71124206,71109684	71130237,71124543,71110122	Gene ID= ENSG00000124370.10 TPM= 5.84 Transcript Type= protein_coding
chr2	71130314	71150101	71130314	71150101	+	ENST00000244230.6@MPHOSPH10	ENST00000244230.6	protein_coding	71130314,71132898,71133948,71134626,71138490,71139795,71141232,71144428,71147999,71149223,71149866	71130754,71133576,71134105,71134797,71138631,71139862,71141369,71144538,71148106,71149453,71150101	Gene ID= ENSG00000124383.8 TPM= 37.36 Transcript Type= protein_coding
chr2	71130632	71139425	71130632	71139425	+	ENST00000498451.2@MPHOSPH10	ENST00000498451.2	protein_coding	71130632,71132898,71133948,71134626,71138490	71130754,71133576,71134105,71134797,71139425	Gene ID= ENSG00000124383.8 TPM= 1.17 Transcript Type= protein_coding
chr2	71182739	71227083	71182739	71227083	-	ENST00000244221.8@PAIP2B	ENST00000244221.8	protein_coding	71226928,71202452,71189845,71182739	71227083,71202600,71190021,71188535	Gene ID= ENSG00000124374.8 TPM= 31.53 Transcript Type= protein_coding
chr2	71331742	71435058	71331742	71435058	+	transcript2916.chr2.nic@ZNF638	transcript2916.chr2.nic	protein_coding	71331742,71348753,71355719,71363153,71363954,71365429,71368382,71369883,71380222,71380513,71396141,71398701,71399559,71400112,71400478,71401956,71403870,71405601,71406128,71408122,71418602,71422814,71424650,71426460,71428547,71431327,71433165,71434742	71331865,71350271,71355780,71363191,71364252,71365706,71368528,71370005,71380280,71380565,71396191,71398772,71399645,71400180,71400518,71402087,71403998,71405642,71406262,71408247,71418639,71424038,71424715,71427414,71428651,71431428,71433283,71435058	Gene ID= ENSG00000075292.18 TPM= 26.07 Transcript Type= NA
chr2	71331764	71435061	71331764	71435061	+	ENST00000264447.8@ZNF638	ENST00000264447.8	protein_coding	71331764,71348753,71355719,71363153,71363954,71365429,71368382,71369883,71380222,71380513,71396141,71398701,71399559,71400112,71400478,71401956,71403870,71405601,71406128,71408122,71418602,71422814,71424650,71426460,71428547,71431327,71433165,71434742	71331875,71350271,71355780,71363191,71364252,71365706,71368528,71370005,71380280,71380565,71396191,71398772,71399645,71400180,71400518,71402087,71403998,71405642,71406262,71408247,71418639,71424038,71424715,71427414,71428651,71431428,71433283,71435061	Gene ID= ENSG00000075292.18 TPM= 16.35 Transcript Type= protein_coding
chr2	71331783	71435058	71331783	71435058	+	transcript2919.chr2.nic@ZNF638	transcript2919.chr2.nic	protein_coding	71331783,71355719,71363153,71363954,71365429,71368382,71369883,71380222,71380513,71396141,71398701,71399559,71400112,71400478,71401956,71403870,71405601,71406128,71408122,71418602,71422814,71424650,71426460,71428547,71431327,71433165,71434742	71331875,71355780,71363191,71364252,71365706,71368528,71370005,71380280,71380565,71396191,71398772,71399645,71400180,71400518,71402087,71403998,71405642,71406262,71408247,71418639,71424038,71424715,71427414,71428651,71431428,71433283,71435058	Gene ID= ENSG00000075292.18 TPM= 3.5 Transcript Type= NA
chr2	71331742	71395751	71331742	71395751	+	transcript2921.chr2.nic@ZNF638	transcript2921.chr2.nic	protein_coding	71331742,71348753,71355719,71363153,71363954,71365429,71368382,71369883,71380222,71380513,71388623,71393394,71395247	71331865,71350271,71355780,71363191,71364252,71365706,71368528,71370005,71380280,71380565,71388723,71393645,71395751	Gene ID= ENSG00000075292.18 TPM= 2.72 Transcript Type= NA
chr2	71331728	71349545	71331728	71349545	+	ENST00000437658.2@ZNF638	ENST00000437658.2	protein_coding	71331728,71348753	71331865,71349545	Gene ID= ENSG00000075292.18 TPM= 1.17 Transcript Type= protein_coding
chr2	71414367	71417500	71414367	71417500	-	transcript2930.chr2.nnic@NA	transcript2930.chr2.nnic	NA	71414367	71417500	Gene ID= novel_gene_chr2_2931 TPM= 2.34 Transcript Type= NA
chr2	71453095	71454746	71453095	71454746	-	transcript2935.chr2.nnic@NA	transcript2935.chr2.nnic	NA	71453095	71454746	Gene ID= novel_gene_chr2_2936 TPM= 2.34 Transcript Type= NA
chr2	72129305	72132129	72129305	72132129	-	transcript2939.chr2.nnic@NA	transcript2939.chr2.nnic	NA	72129305	72132129	Gene ID= novel_gene_chr2_2940 TPM= 4.67 Transcript Type= NA
chr2	72175984	72826041	72175984	72826041	-	ENST00000272427.10@EXOC6B	ENST00000272427.10	protein_coding	72825798,72741304,72733071,72731155,72731007,72718103,72575492,72559453,72515043,72514634,72513132,72499901,72498454,72496454,72495430,72492318,72480616,72465160,72379729,72334947,72184075,72175984	72826041,72741469,72733118,72731245,72731052,72718307,72575668,72559521,72515126,72514680,72513252,72499972,72498551,72496559,72495539,72492429,72480750,72465339,72379870,72335020,72184187,72179461	Gene ID= ENSG00000144036.15 TPM= 16.35 Transcript Type= protein_coding
chr2	72887393	72892158	72887393	72892158	+	transcript2948.chr2.nic@SPR	transcript2948.chr2.nic	protein_coding	72887393,72891347	72888604,72892158	Gene ID= ENSG00000116096.5 TPM= 9.34 Transcript Type= NA
chr2	72887360	72892158	72887360	72892158	+	ENST00000234454.5@SPR	ENST00000234454.5	protein_coding	72887360,72888314,72891347	72887736,72888604,72892158	Gene ID= ENSG00000116096.5 TPM= 134.27 Transcript Type= protein_coding
chr2	72942038	73071731	72942038	73071731	-	transcript2949.chr2.nnic@SFXN5	transcript2949.chr2.nnic	protein_coding	73071604,73058528,73040854,73023188,73022522,73020239,73001525,73000431,72998949,72988258,72971570,72968448,72961131,72945026,72942038	73071731,73058596,73040931,73023214,73022576,73020264,73001578,73000487,72999014,72988348,72971685,72968533,72961248,72945099,72943904	Gene ID= ENSG00000144040.12 TPM= 4.09 Transcript Type= NA
chr2	72942036	73071836	72942036	73071836	-	ENST00000272433.6@SFXN5	ENST00000272433.6	protein_coding	73071604,73058528,73040854,73023188,73022522,73020239,73001525,73000431,72998949,72988258,72971570,72968448,72961131,72942036	73071836,73058596,73040931,73023214,73022576,73020264,73001578,73000487,72999014,72988348,72971685,72968533,72961248,72945099	Gene ID= ENSG00000144040.12 TPM= 21.6 Transcript Type= protein_coding
chr2	73049086	73071266	73049086	73071266	-	ENST00000472259.5@SFXN5	ENST00000472259.5	protein_coding	73070460,73058528,73049086	73071266,73058596,73049899	Gene ID= ENSG00000144040.12 TPM= 1.17 Transcript Type= processed_transcript
chr2	73073382	73088407	73073382	73088407	-	transcript2957.chr2.nnic@RAB11FIP5	transcript2957.chr2.nnic	protein_coding	73088050,73079651,73075993,73073382	73088407,73081345,73076182,73075724	Gene ID= ENSG00000135631.16 TPM= 29.19 Transcript Type= NA
chr2	73082041	73112944	73082041	73112944	-	transcript2959.chr2.nic@RAB11FIP5	transcript2959.chr2.nic	protein_coding	73112347,73088879,73082041	73112944,73089315,73088749	Gene ID= ENSG00000135631.16 TPM= 3.5 Transcript Type= NA
chr2	73073382	73113018	73073382	73113018	-	ENST00000258098.6@RAB11FIP5	ENST00000258098.6	protein_coding	73112347,73088879,73088050,73075993,73073382	73113018,73089315,73088749,73076182,73075724	Gene ID= ENSG00000135631.16 TPM= 86.4 Transcript Type= protein_coding
chr2	73214251	73227237	73214251	73227237	+	transcript2960.chr2.nnic@SMYD5	transcript2960.chr2.nnic	protein_coding	73214251,73218861,73219129,73220051,73220661,73221165,73221826,73222755,73223036,73223426,73223947,73224866,73225631,73225796	73214362,73218969,73219318,73220190,73220782,73221234,73221930,73222817,73223106,73223532,73224003,73224960,73225701,73227237	Gene ID= ENSG00000135632.11 TPM= 3.12 Transcript Type= NA
chr2	73214222	73227237	73214222	73227237	+	ENST00000389501.8@SMYD5	ENST00000389501.8	protein_coding	73214222,73218861,73220051,73220661,73221165,73221826,73222755,73223036,73223426,73223947,73224866,73225631,73225796	73214362,73218969,73220190,73220782,73221234,73221930,73222817,73223106,73223532,73224003,73224960,73225701,73227237	Gene ID= ENSG00000135632.11 TPM= 20.05 Transcript Type= protein_coding
chr2	73217646	73227237	73217646	73227237	+	transcript2964.chr2.nic@SMYD5	transcript2964.chr2.nic	protein_coding	73217646,73220051,73220661,73221165,73221826,73222755,73223036,73223426,73223947,73224866,73225631,73225796	73218969,73220190,73220782,73221234,73221930,73222817,73223106,73223532,73224003,73224960,73225701,73227237	Gene ID= ENSG00000135632.11 TPM= 4.87 Transcript Type= NA
chr2	73228010	73234579	73228010	73234579	-	transcript2974.chr2.nic@PRADC1	transcript2974.chr2.nic	protein_coding	73233094,73230113,73229461,73228010	73234579,73230213,73229570,73228962	Gene ID= ENSG00000135617.3 TPM= 2.34 Transcript Type= NA
chr2	73228006	73233228	73228006	73233228	-	ENST00000258083.2@PRADC1	ENST00000258083.2	protein_coding	73233094,73230113,73229461,73228795,73228006	73233228,73230213,73229570,73228962,73228574	Gene ID= ENSG00000135617.3 TPM= 28.02 Transcript Type= protein_coding
chr2	73234238	73253004	73234238	73253004	+	ENST00000258091.9@CCT7	ENST00000258091.9	protein_coding	73234238,73239643,73240437,73243004,73243997,73244544,73247762,73248991,73249819,73250306,73251226,73252640	73234384,73239796,73240543,73243129,73244049,73244715,73247926,73249179,73249916,73250438,73251432,73253004	Gene ID= ENSG00000135624.15 TPM= 232.35 Transcript Type= protein_coding
chr2	73729890	73737400	73729890	73737400	-	ENST00000318190.7@TPRKB	ENST00000318190.7	protein_coding	73737302,73734429,73732584,73732163,73730560,73729890	73737400,73734591,73732700,73732285,73730736,73730029	Gene ID= ENSG00000144034.14 TPM= 7.01 Transcript Type= protein_coding
chr2	73729169	73737375	73729169	73737375	-	ENST00000463231.5@TPRKB	ENST00000463231.5	protein_coding	73737302,73734528,73732163,73730560,73729169	73737375,73734591,73732285,73730736,73729305	Gene ID= ENSG00000144034.14 TPM= 1.17 Transcript Type= processed_transcript
chr2	73729830	73737386	73729830	73737386	-	ENST00000272424.9@TPRKB	ENST00000272424.9	protein_coding	73737302,73734429,73732163,73730560,73729830	73737386,73734591,73732285,73730736,73730029	Gene ID= ENSG00000144034.14 TPM= 7.01 Transcript Type= protein_coding
chr2	73729890	73737400	73729890	73737400	-	ENST00000409716.6@TPRKB	ENST00000409716.6	protein_coding	73737302,73734429,73732584,73732163,73730560,73729890	73737400,73734588,73732700,73732285,73730736,73730029	Gene ID= ENSG00000144034.14 TPM= 1.17 Transcript Type= protein_coding
chr2	73762184	73780157	73762184	73780157	-	ENST00000272444.7@DUSP11	ENST00000272444.7	protein_coding	73779874,73778301,73774913,73773800,73769265,73767161,73766828,73766418,73762184	73780157,73778376,73775044,73773923,73769325,73767207,73766903,73766594,73762859	Gene ID= ENSG00000144048.10 TPM= 21.02 Transcript Type= protein_coding
chr2	73828969	73862884	73828969	73862884	+	transcript2990.chr2.nic@STAMBP	transcript2990.chr2.nic	protein_coding	73828969,73829405,73830845,73844813,73845167,73847387,73849363,73850376,73859254,73860052,73862203	73828996,73829510,73831059,73844888,73845262,73847753,73849487,73850513,73859366,73860151,73862884	Gene ID= ENSG00000124356.15 TPM= 7.01 Transcript Type= NA
chr2	73828987	73867168	73828987	73867168	+	ENST00000394073.5@STAMBP	ENST00000394073.5	protein_coding	73828987,73829405,73830845,73844813,73845167,73847387,73849363,73850376,73859254,73860052,73862203	73829070,73829510,73831059,73844888,73845262,73847753,73849487,73850513,73859366,73860151,73867168	Gene ID= ENSG00000124356.15 TPM= 9.34 Transcript Type= protein_coding
chr2	73828916	73867168	73828916	73867168	+	ENST00000339566.7@STAMBP	ENST00000339566.7	protein_coding	73828916,73830845,73844813,73845167,73847387,73849363,73850376,73859254,73860052,73862203	73828996,73831059,73844888,73845262,73847753,73849487,73850513,73859366,73860151,73867168	Gene ID= ENSG00000124356.15 TPM= 23.35 Transcript Type= protein_coding
chr2	73828961	73862884	73828961	73862884	+	transcript2998.chr2.nnic@STAMBP	transcript2998.chr2.nnic	protein_coding	73828961,73844813,73845167,73847387,73849363,73850376,73859254,73860052,73862203	73828996,73844888,73845262,73847753,73849487,73850513,73859366,73860151,73862884	Gene ID= ENSG00000124356.15 TPM= 2.34 Transcript Type= NA
chr2	73828962	73873633	73828962	73873633	+	ENST00000409707.5@STAMBP	ENST00000409707.5	protein_coding	73828962,73830845,73844813,73845167,73847387,73849363,73850376,73859254,73860052,73862203,73873352	73828996,73831059,73844888,73845262,73847753,73849487,73850513,73859366,73860151,73862304,73873633	Gene ID= ENSG00000124356.15 TPM= 1.17 Transcript Type= protein_coding
chr2	73840315	73842087	73840315	73842087	-	transcript2999.chr2.nnic@NA	transcript2999.chr2.nnic	NA	73840315	73842087	Gene ID= novel_gene_chr2_3000 TPM= 2.34 Transcript Type= NA
chr2	73926826	73958961	73926826	73958961	+	ENST00000264093.8@DGUOK	ENST00000264093.8	protein_coding	73926826,73938910,73946719,73950585,73957125,73958146,73958710	73927052,73939022,73946906,73950732,73957240,73958245,73958961	Gene ID= ENSG00000114956.19 TPM= 25.69 Transcript Type= protein_coding
chr2	73926826	73958959	73926826	73958959	+	ENST00000629438.2@DGUOK	ENST00000629438.2	protein_coding	73926826,73946719,73950585,73957125,73958146,73958710	73927052,73946906,73950732,73957240,73958245,73958959	Gene ID= ENSG00000114956.19 TPM= 7.01 Transcript Type= protein_coding
chr2	73926826	73958961	73926826	73958961	+	ENST00000348222.3@DGUOK	ENST00000348222.3	protein_coding	73926826,73938910,73946719,73958146,73958710	73927052,73939022,73946906,73958245,73958961	Gene ID= ENSG00000114956.19 TPM= 3.5 Transcript Type= protein_coding
chr2	73926842	73958946	73926842	73958946	+	transcript3015.chr2.nnic@DGUOK	transcript3015.chr2.nnic	protein_coding	73926842,73946719,73958146,73958710	73927052,73946888,73958245,73958946	Gene ID= ENSG00000114956.19 TPM= 2.34 Transcript Type= NA
chr2	73926880	73958946	73926880	73958946	+	transcript3017.chr2.nnic@DGUOK	transcript3017.chr2.nnic	protein_coding	73926880,73958146,73958710	73927052,73958245,73958946	Gene ID= ENSG00000114956.19 TPM= 4.67 Transcript Type= NA
chr2	73926875	73958946	73926875	73958946	+	ENST00000418996.5@DGUOK	ENST00000418996.5	protein_coding	73926875,73946719,73958146,73958710	73927052,73946906,73958245,73958946	Gene ID= ENSG00000114956.19 TPM= 11.68 Transcript Type= nonsense_mediated_decay
chr2	74135398	74147994	74135398	74147994	-	ENST00000327428.9@BOLA3	ENST00000327428.9	protein_coding	74147821,74145189,74142272,74135398	74147994,74145303,74142360,74135658	Gene ID= ENSG00000163170.11 TPM= 12.84 Transcript Type= protein_coding
chr2	74135415	74147905	74135415	74147905	-	ENST00000295326.4@BOLA3	ENST00000295326.4	protein_coding	74147821,74145189,74135415	74147905,74145303,74135658	Gene ID= ENSG00000163170.11 TPM= 8.17 Transcript Type= protein_coding
chr2	74148039	74150061	74148039	74150061	+	ENST00000423477.2@BOLA3-AS1	ENST00000423477.2	antisense_RNA	74148039,74148698	74148478,74150061	Gene ID= ENSG00000225439.2 TPM= 3.5 Transcript Type= antisense_RNA
chr2	74156084	74178904	74156084	74178904	-	transcript3025.chr2.nnic@MOB1A	transcript3025.chr2.nnic	protein_coding	74178661,74172586,74167014,74165218,74159091,74158654,74156084	74178904,74172752,74167107,74165351,74159254,74158771,74156645	Gene ID= ENSG00000114978.17 TPM= 3.5 Transcript Type= NA
chr2	74152528	74178868	74152528	74178868	-	ENST00000396049.4@MOB1A	ENST00000396049.4	protein_coding	74178661,74172586,74167014,74165218,74159091,74152528	74178868,74172752,74167107,74165351,74159254,74156645	Gene ID= ENSG00000114978.17 TPM= 47.87 Transcript Type= protein_coding
chr2	74198609	74217565	74198609	74217565	+	transcript3046.chr2.nnic@MTHFD2	transcript3046.chr2.nnic	protein_coding	74198609,74201382,74205705,74207704,74208569,74209942,74211199,74211741,74214079	74198742,74201479,74205889,74207826,74208721,74210049,74211291,74211866,74217565	Gene ID= ENSG00000065911.11 TPM= 7.01 Transcript Type= NA
chr2	74355926	74361534	74355926	74361534	-	transcript3082.chr2.nnic@NA	transcript3082.chr2.nnic	NA	74355926	74361534	Gene ID= novel_gene_chr2_3083 TPM= 3.5 Transcript Type= NA
chr2	74361158	74391880	74361158	74391880	-	transcript3058.chr2.nnic@DCTN1	transcript3058.chr2.nnic	protein_coding	74391794,74378000,74377648,74377432,74372928,74371537,74370979,74370621,74370466,74370186,74369965,74369300,74369098,74368728,74367971,74367696,74367352,74367045,74366783,74366459,74366244,74365893,74365515,74365075,74363294,74362994,74362650,74362052,74361158	74391880,74378245,74377726,74377466,74372948,74371728,74371176,74370825,74370544,74370345,74370069,74369491,74369214,74368880,74368131,74367864,74367420,74367107,74366932,74366620,74366375,74366018,74365657,74365241,74363427,74363177,74362729,74362141,74361636	Gene ID= ENSG00000204843.12 TPM= 25.8 Transcript Type= NA
chr2	74361157	74392087	74361157	74392087	-	ENST00000409240.5@DCTN1	ENST00000409240.5	protein_coding	74391794,74378000,74377648,74377432,74371537,74370979,74370621,74370466,74370186,74369965,74369300,74369098,74368728,74367971,74367696,74367352,74367045,74366783,74366459,74366244,74365893,74365515,74365075,74363294,74362994,74362650,74362052,74361157	74392087,74378245,74377726,74377466,74371728,74371176,74370825,74370544,74370345,74370069,74369491,74369214,74368880,74368131,74367864,74367420,74367107,74366932,74366620,74366375,74366018,74365657,74365241,74363427,74363177,74362729,74362141,74361636	Gene ID= ENSG00000204843.12 TPM= 371.8 Transcript Type= protein_coding
chr2	74361157	74374735	74361157	74374735	-	ENST00000409438.5@DCTN1	ENST00000409438.5	protein_coding	74374323,74372928,74371537,74370979,74370621,74370466,74370186,74369965,74369300,74369098,74368728,74367971,74367696,74367352,74367045,74366783,74366459,74366244,74365893,74365515,74365075,74363294,74362994,74362650,74362052,74361157	74374735,74372948,74371728,74371176,74370825,74370544,74370345,74370069,74369491,74369214,74368880,74368131,74367864,74367420,74367107,74366932,74366620,74366375,74366018,74365657,74365241,74363427,74363177,74362729,74362141,74361636	Gene ID= ENSG00000204843.12 TPM= 17.63 Transcript Type= protein_coding
chr2	74361156	74391867	74361156	74391867	-	ENST00000434055.5@DCTN1	ENST00000434055.5	protein_coding	74391794,74378000,74377648,74377432,74371537,74370979,74370621,74370466,74370186,74369965,74369300,74369098,74368728,74367971,74367696,74367352,74367045,74366783,74366244,74365893,74365515,74365075,74363294,74362994,74362650,74362052,74361156	74391867,74378245,74377726,74377466,74371728,74371176,74370825,74370544,74370345,74370069,74369491,74369214,74368880,74368131,74367864,74367420,74367107,74366932,74366620,74366018,74365657,74365241,74363427,74363177,74362729,74362141,74361636	Gene ID= ENSG00000204843.12 TPM= 5.25 Transcript Type= nonsense_mediated_decay
chr2	74421730	74425755	74421730	74425755	+	ENST00000348227.4@WDR54	ENST00000348227.4	protein_coding	74421730,74422153,74422870,74423319,74423478,74423855,74424875,74425075,74425417,74425570	74421816,74422375,74422932,74423385,74423531,74423982,74424975,74425237,74425491,74425755	Gene ID= ENSG00000005448.16 TPM= 8.17 Transcript Type= protein_coding
chr2	74424146	74425566	74424146	74425566	-	transcript3103.chr2.nnic@NA	transcript3103.chr2.nnic	NA	74424146	74425566	Gene ID= novel_gene_chr2_3104 TPM= 2.34 Transcript Type= NA
chr2	74425836	74440583	74425836	74440583	-	ENST00000305557.9@RTKN	ENST00000305557.9	protein_coding	74440353,74439551,74432467,74430616,74430465,74430252,74429828,74428848,74428631,74428268,74427424,74427169,74425836	74440583,74439977,74432666,74430677,74430518,74430369,74430037,74428942,74428737,74428396,74427592,74427273,74426574	Gene ID= ENSG00000114993.16 TPM= 2.53 Transcript Type= protein_coding
chr2	74425883	74440631	74425883	74440631	-	ENST00000233330.6@RTKN	ENST00000233330.6	protein_coding	74440353,74432467,74430616,74430465,74430252,74429828,74428848,74428631,74428268,74427424,74427169,74425883	74440631,74432666,74430677,74430518,74430369,74430037,74428942,74428737,74428396,74427592,74427273,74426574	Gene ID= ENSG00000114993.16 TPM= 5.45 Transcript Type= protein_coding
chr2	74425883	74441921	74425883	74441921	-	transcript3097.chr2.nic@RTKN	transcript3097.chr2.nic	protein_coding	74441706,74430616,74430465,74430252,74429828,74428848,74428268,74427424,74427169,74425883	74441921,74432666,74430518,74430369,74430037,74428942,74428737,74427592,74427273,74426574	Gene ID= ENSG00000114993.16 TPM= 4.67 Transcript Type= NA
chr2	74425876	74441899	74425876	74441899	-	ENST00000272430.9@RTKN	ENST00000272430.9	protein_coding	74441706,74432467,74430616,74430465,74430252,74429828,74428848,74428631,74428268,74427424,74427169,74425876	74441899,74432666,74430677,74430518,74430369,74430037,74428942,74428737,74428396,74427592,74427273,74426574	Gene ID= ENSG00000114993.16 TPM= 25.89 Transcript Type= protein_coding
chr2	74455023	74457960	74455023	74457960	+	ENST00000233331.11@INO80B	ENST00000233331.11	protein_coding	74455023,74455406,74455818,74456103,74457334	74455174,74455598,74455936,74456272,74457960	Gene ID= ENSG00000115274.14 TPM= 19.85 Transcript Type= protein_coding
chr2	74457829	74460883	74457829	74460883	+	transcript3109.chr2.nic@WBP1	transcript3109.chr2.nic	protein_coding	74457829,74459478,74459643,74459873,74460221	74459098,74459562,74459745,74460049,74460883	Gene ID= ENSG00000239779.6 TPM= 4.09 Transcript Type= NA
chr2	74458329	74460891	74458329	74460891	+	ENST00000233615.6@WBP1	ENST00000233615.6	protein_coding	74458329,74459643,74459873,74460221	74458671,74459745,74460049,74460891	Gene ID= ENSG00000239779.6 TPM= 41.45 Transcript Type= protein_coding
chr2	74461069	74465413	74461069	74465413	-	transcript3120.chr2.nic@MOGS	transcript3120.chr2.nic	protein_coding	74464896,74464496,74463190,74461069	74465413,74464722,74463386,74462834	Gene ID= ENSG00000115275.11 TPM= 10.51 Transcript Type= NA
chr2	74461057	74465410	74461057	74465410	-	ENST00000233616.8@MOGS	ENST00000233616.8	protein_coding	74464896,74464496,74463190,74461057	74465410,74464722,74463386,74463012	Gene ID= ENSG00000115275.11 TPM= 30.36 Transcript Type= protein_coding
chr2	74463841	74465392	74463841	74465392	-	transcript3125.chr2.nnic@NA	transcript3125.chr2.nnic	NA	74463841	74465392	Gene ID= novel_gene_chr2_3126 TPM= 3.5 Transcript Type= NA
chr2	74471986	74472687	74471986	74472687	-	ENST00000409710.1@MRPL53	ENST00000409710.1	protein_coding	74472569,74471986	74472687,74472252	Gene ID= ENSG00000204822.6 TPM= 5.25 Transcript Type= protein_coding
chr2	74471992	74472547	74471992	74472547	-	ENST00000467349.1@MRPL53	ENST00000467349.1	protein_coding	74472358,74471992	74472547,74472252	Gene ID= ENSG00000204822.6 TPM= 2.92 Transcript Type= retained_intron
chr2	74473790	74483234	74473790	74483234	-	ENST00000393965.7@CCDC142	ENST00000393965.7	protein_coding	74481817,74481452,74481223,74480956,74480769,74475612,74475225,74474916,74473790	74483234,74481538,74481372,74481086,74480882,74475726,74475402,74475115,74474802	Gene ID= ENSG00000135637.13 TPM= 1.17 Transcript Type= protein_coding
chr2	74474082	74482929	74474082	74482929	-	transcript3133.chr2.nic@CCDC142	transcript3133.chr2.nic	protein_coding	74481817,74481452,74481223,74480956,74480769,74475612,74475225,74474082	74482929,74481538,74481372,74481086,74480882,74475726,74475402,74475115	Gene ID= ENSG00000135637.13 TPM= 2.34 Transcript Type= NA
chr2	74483068	74494559	74483068	74494559	+	transcript3142.chr2.nic@TTC31	transcript3142.chr2.nic	protein_coding	74483068,74483322,74490025,74490244,74490656,74491128,74491295,74491481,74492004,74492139,74492304,74492646,74492922	74483135,74483410,74490127,74490473,74490739,74491184,74491375,74491666,74492055,74492229,74492445,74492747,74494559	Gene ID= ENSG00000115282.19 TPM= 11.68 Transcript Type= NA
chr2	74483068	74494559	74483068	74494559	+	transcript3143.chr2.nnic@TTC31	transcript3143.chr2.nnic	protein_coding	74483068,74483322,74490025,74490244,74490656,74491128,74491295,74491481,74491944,74492139,74492304,74492646,74492922	74483135,74483410,74490127,74490473,74490739,74491184,74491375,74491672,74492055,74492229,74492445,74492747,74494559	Gene ID= ENSG00000115282.19 TPM= 4.67 Transcript Type= NA
chr2	74483068	74494559	74483068	74494559	+	transcript3153.chr2.nnic@TTC31	transcript3153.chr2.nnic	protein_coding	74483068,74483322,74490244,74491295,74491481,74491944,74492139,74492304,74492646,74492922	74483135,74483410,74491184,74491375,74491672,74492055,74492229,74492445,74492747,74494559	Gene ID= ENSG00000115282.19 TPM= 3.5 Transcript Type= NA
chr2	74502595	74504677	74502595	74504677	+	ENST00000603175.1@LBX2-AS1	ENST00000603175.1	antisense_RNA	74502595	74504677	Gene ID= ENSG00000257702.3 TPM= 14.01 Transcript Type= antisense_RNA
chr2	74505043	74508580	74505043	74508580	-	ENST00000233630.10@PCGF1	ENST00000233630.10	protein_coding	74507576,74507042,74506732,74506181,74505952,74505737,74505552,74505339,74505043	74508580,74507147,74506884,74506252,74506057,74505770,74505638,74505419,74505190	Gene ID= ENSG00000115289.13 TPM= 11.68 Transcript Type= protein_coding
chr2	74505043	74507399	74505043	74507399	-	transcript3170.chr2.nic@PCGF1	transcript3170.chr2.nic	protein_coding	74506732,74506181,74505952,74505737,74505552,74505339,74505043	74507399,74506252,74506057,74505770,74505638,74505419,74505190	Gene ID= ENSG00000115289.13 TPM= 2.34 Transcript Type= NA
chr2	74505043	74507699	74505043	74507699	-	transcript3174.chr2.nic@PCGF1	transcript3174.chr2.nic	protein_coding	74505552,74505339,74505043	74507699,74505419,74505190	Gene ID= ENSG00000115289.13 TPM= 2.34 Transcript Type= NA
chr2	74505043	74507416	74505043	74507416	-	ENST00000475863.5@PCGF1	ENST00000475863.5	protein_coding	74507042,74506732,74506181,74505952,74505737,74505552,74505339,74505043	74507416,74506884,74506252,74506057,74505770,74505638,74505419,74505190	Gene ID= ENSG00000115289.13 TPM= 8.17 Transcript Type= retained_intron
chr2	74507218	74509227	74507218	74509227	+	transcript3175.chr2.nnic@NA	transcript3175.chr2.nnic	NA	74507218	74509227	Gene ID= novel_gene_chr2_3176 TPM= 2.34 Transcript Type= NA
chr2	74526648	74529939	74526648	74529939	-	ENST00000377526.3@AUP1	ENST00000377526.3	protein_coding	74529580,74529362,74529132,74528751,74528417,74528248,74527940,74527736,74527471,74527248,74526941,74526648	74529939,74529499,74529282,74528935,74528489,74528321,74528006,74527838,74527590,74527363,74527059,74526836	Gene ID= ENSG00000115307.16 TPM= 243.56 Transcript Type= protein_coding
chr2	74526652	74529697	74526652	74529697	-	ENST00000463900.5@AUP1	ENST00000463900.5	protein_coding	74529580,74529362,74528751,74528417,74528248,74527940,74527736,74527471,74527248,74526941,74526652	74529697,74529499,74529282,74528489,74528321,74528006,74527838,74527590,74527363,74527059,74526836	Gene ID= ENSG00000115307.16 TPM= 50.91 Transcript Type= retained_intron
chr2	74526689	74529685	74526689	74529685	-	ENST00000466894.5@AUP1	ENST00000466894.5	protein_coding	74529580,74529362,74528751,74528417,74528248,74527940,74527736,74527471,74527248,74526941,74526689	74529685,74529499,74529282,74528489,74528321,74528006,74527838,74527590,74527363,74527121,74526836	Gene ID= ENSG00000115307.16 TPM= 5.84 Transcript Type= retained_intron
chr2	74529725	74533152	74529725	74533152	+	ENST00000462909.5@HTRA2	ENST00000462909.5	protein_coding	74529725,74530445,74530617,74530911,74531339,74531597,74531856,74532619,74532820	74529912,74530512,74530821,74531105,74531371,74531702,74531925,74532714,74533152	Gene ID= ENSG00000115317.11 TPM= 2.34 Transcript Type= processed_transcript
chr2	74529377	74533348	74529377	74533348	+	ENST00000258080.7@HTRA2	ENST00000258080.7	protein_coding	74529377,74530617,74530911,74531339,74531597,74531856,74532619,74532820	74530512,74530821,74531105,74531371,74531702,74531925,74532714,74533348	Gene ID= ENSG00000115317.11 TPM= 8.17 Transcript Type= protein_coding
chr2	74529891	74533152	74529891	74533152	+	transcript3219.chr2.nic@HTRA2	transcript3219.chr2.nic	protein_coding	74529891,74530617,74530911,74531597,74531856,74532619,74532820	74530512,74530821,74531371,74531702,74531925,74532714,74533152	Gene ID= ENSG00000115317.11 TPM= 5.84 Transcript Type= NA
chr2	74530046	74533192	74530046	74533192	+	ENST00000437202.1@HTRA2	ENST00000437202.1	protein_coding	74530046,74530617,74530911,74531339,74531567,74531856,74532820	74530512,74530821,74531105,74531371,74531702,74531925,74533192	Gene ID= ENSG00000115317.11 TPM= 2.34 Transcript Type= protein_coding
chr2	74532438	74553935	74532438	74553935	-	ENST00000264094.7@LOXL3	ENST00000264094.7	protein_coding	74553876,74552322,74550185,74549369,74536709,74536291,74535996,74535588,74535292,74534531,74534316,74534100,74533882,74532438	74553935,74552646,74550348,74549583,74536928,74536471,74536150,74535755,74535454,74534774,74534431,74534236,74533993,74533679	Gene ID= ENSG00000115318.11 TPM= 2.34 Transcript Type= protein_coding
chr2	74548913	74550606	74548913	74550606	+	transcript3244.chr2.nnic@NA	transcript3244.chr2.nnic	NA	74548913	74550606	Gene ID= novel_gene_chr2_3245 TPM= 2.34 Transcript Type= NA
chr2	74554086	74557554	74554086	74557554	+	ENST00000233668.9@DOK1	ENST00000233668.9	protein_coding	74554086,74555154,74555575,74555894,74556308	74554814,74555453,74555668,74556078,74557554	Gene ID= ENSG00000115325.13 TPM= 64.22 Transcript Type= protein_coding
chr2	74554751	74557554	74554751	74557554	+	transcript3234.chr2.nic@DOK1	transcript3234.chr2.nic	protein_coding	74554751,74555154,74555575,74555894,74556308	74554859,74555453,74555668,74556078,74557554	Gene ID= ENSG00000115325.13 TPM= 4.67 Transcript Type= NA
chr2	74554751	74557551	74554751	74557551	+	transcript3238.chr2.nic@DOK1	transcript3238.chr2.nic	protein_coding	74554751,74555154,74555575,74556308	74554859,74555453,74555668,74557551	Gene ID= ENSG00000115325.13 TPM= 3.5 Transcript Type= NA
chr2	74554731	74557551	74554731	74557551	+	ENST00000340004.6@DOK1	ENST00000340004.6	protein_coding	74554731,74555154,74555575,74556308	74554814,74555453,74555668,74557551	Gene ID= ENSG00000115325.13 TPM= 10.51 Transcript Type= protein_coding
chr2	74654228	74682059	74654228	74682059	+	ENST00000357877.6@SEMA4F	ENST00000357877.6	protein_coding	74654228,74656534,74657565,74657853,74662732,74673457,74673677,74674498,74674888,74675162,74675525,74675749,74679276,74679599	74654521,74656685,74657624,74657951,74662825,74673576,74673828,74674676,74675035,74675384,74675634,74675909,74679334,74682059	Gene ID= ENSG00000135622.12 TPM= 10.51 Transcript Type= protein_coding
chr2	74654228	74683853	74654228	74683853	+	ENST00000611975.4@SEMA4F	ENST00000611975.4	protein_coding	74654228,74656534,74657565,74662732,74673457,74673677,74674498,74674888,74675162,74675525,74675749,74679276,74679599	74654521,74656685,74657624,74662825,74673576,74673828,74674676,74675035,74675384,74675634,74675909,74679334,74683853	Gene ID= ENSG00000135622.12 TPM= 5.84 Transcript Type= protein_coding
chr2	74832655	74833987	74832655	74833987	-	ENST00000610008.1@AC019069.1	ENST00000610008.1	lincRNA	74832655	74833987	Gene ID= ENSG00000272711.1 TPM= 2.34 Transcript Type= lincRNA
chr2	74833981	74893359	74833981	74893359	+	ENST00000290573.6@HK2	ENST00000290573.6	protein_coding	74833981,74854293,74867636,74872300,74873276,74873844,74874266,74877166,74878688,74880265,74881711,74882120,74885494,74886294,74886490,74887903,74889245,74890797	74834643,74854455,74867784,74872419,74873371,74873943,74874449,74877321,74878921,74880569,74881859,74882239,74885589,74886393,74886673,74888058,74889478,74893359	Gene ID= ENSG00000159399.9 TPM= 69.47 Transcript Type= protein_coding
chr2	74867020	74893359	74867020	74893359	+	transcript3259.chr2.nnic@HK2	transcript3259.chr2.nnic	protein_coding	74867020,74867636,74872300,74873276,74873844,74874266,74877166,74878688,74880265,74881711,74882120,74885494,74886294,74886490,74887903,74889245,74890797	74867106,74867784,74872419,74873371,74873943,74874449,74877321,74878921,74880569,74881859,74882239,74885589,74886393,74886673,74888058,74889478,74893359	Gene ID= ENSG00000159399.9 TPM= 20.43 Transcript Type= NA
chr2	74958492	74970128	74958492	74970128	+	ENST00000483063.1@POLE4	ENST00000483063.1	protein_coding	74958492,74959341,74960105,74969409	74958892,74959425,74960146,74970128	Gene ID= ENSG00000115350.11 TPM= 23.35 Transcript Type= protein_coding
chr2	74959006	74969723	74959006	74969723	+	ENST00000465242.5@POLE4	ENST00000465242.5	protein_coding	74959006,74959341,74960105,74969409	74959091,74959425,74960146,74969723	Gene ID= ENSG00000115350.11 TPM= 2.34 Transcript Type= processed_transcript
chr2	75046463	75199700	75046463	75199700	-	ENST00000305249.9@TACR1	ENST00000305249.9	protein_coding	75198546,75120574,75053605,75051251,75046463	75199700,75120768,75053755,75051447,75049723	Gene ID= ENSG00000115353.10 TPM= 2.34 Transcript Type= protein_coding
chr2	75154366	75189949	75154366	75189949	+	ENST00000604271.2@AC007681.1	ENST00000604271.2	antisense_RNA	75154366,75156204,75186830	75154571,75156315,75189949	Gene ID= ENSG00000270571.2 TPM= 2.34 Transcript Type= antisense_RNA
chr2	75236789	75417261	75236789	75417261	-	transcript3269.chr2.nnic@NA	transcript3269.chr2.nnic	NA	75416800,75236789	75417261,75237862	Gene ID= novel_gene_chr2_3270 TPM= 3.5 Transcript Type= NA
chr2	75492318	75560974	75492318	75560974	-	transcript3276.chr2.nnic@EVA1A	transcript3276.chr2.nnic	protein_coding	75560680,75522365,75520194,75518056,75492318	75560974,75522487,75520268,75518208,75493609	Gene ID= ENSG00000115363.13 TPM= 3.5 Transcript Type= NA
chr2	75492486	75561300	75492486	75561300	-	transcript3280.chr2.nic@EVA1A	transcript3280.chr2.nic	protein_coding	75561257,75560680,75522365,75518056,75492486	75561300,75560919,75522487,75518208,75493609	Gene ID= ENSG00000115363.13 TPM= 2.34 Transcript Type= NA
chr2	75492318	75561282	75492318	75561282	-	transcript3286.chr2.nic@EVA1A	transcript3286.chr2.nic	protein_coding	75560680,75518056,75492318	75561282,75518208,75493609	Gene ID= ENSG00000115363.13 TPM= 10.51 Transcript Type= NA
chr2	75558483	75560936	75558483	75560936	-	transcript3290.chr2.nic@EVA1A	transcript3290.chr2.nic	protein_coding	75560680,75558483	75560936,75558699	Gene ID= ENSG00000115363.13 TPM= 3.5 Transcript Type= NA
chr2	75492318	75560913	75492318	75560913	-	ENST00000393913.7@EVA1A	ENST00000393913.7	protein_coding	75560680,75522365,75518056,75492318	75560913,75522487,75518208,75493609	Gene ID= ENSG00000115363.13 TPM= 18.68 Transcript Type= protein_coding
chr2	75646783	75657860	75646783	75657860	+	ENST00000393909.6@MRPL19	ENST00000393909.6	protein_coding	75646783,75647102,75652142,75652523,75654736,75655064	75646910,75647219,75652260,75652657,75654917,75657860	Gene ID= ENSG00000115364.13 TPM= 8.17 Transcript Type= protein_coding
chr2	75662706	75710989	75662706	75710989	-	ENST00000321027.7@GCFC2	ENST00000321027.7	protein_coding	75710591,75706523,75702199,75701190,75696200,75694241,75691977,75690638,75689969,75689026,75687827,75680193,75673444,75671950,75670138,75665929,75662706	75710989,75706651,75702423,75701287,75696315,75694427,75692100,75690719,75690081,75689225,75687977,75680314,75673520,75672016,75670284,75666053,75664783	Gene ID= ENSG00000005436.13 TPM= 2.34 Transcript Type= protein_coding
chr2	75701796	75710899	75701796	75710899	-	ENST00000470503.1@GCFC2	ENST00000470503.1	protein_coding	75710591,75706523,75701796	75710899,75706651,75702423	Gene ID= ENSG00000005436.13 TPM= 2.34 Transcript Type= protein_coding
chr2	75710794	75713132	75710794	75713132	+	transcript3305.chr2.nnic@NA	transcript3305.chr2.nnic	NA	75710794	75713132	Gene ID= novel_gene_chr2_3306 TPM= 2.34 Transcript Type= NA
chr2	84423523	84459480	84423523	84459480	-	ENST00000393868.6@SUCLG1	ENST00000393868.6	protein_coding	84459173,84449649,84443284,84441247,84441047,84433352,84431508,84425415,84423523	84459480,84449752,84443400,84441459,84441104,84433435,84431659,84425603,84423772	Gene ID= ENSG00000163541.11 TPM= 91.07 Transcript Type= protein_coding
chr2	84423532	84459279	84423532	84459279	-	transcript3310.chr2.nic@SUCLG1	transcript3310.chr2.nic	protein_coding	84459173,84449649,84443284,84441247,84441047,84433352,84431508,84423532	84459279,84449752,84443400,84441459,84441104,84433435,84431659,84425603	Gene ID= ENSG00000163541.11 TPM= 4.67 Transcript Type= NA
chr2	84423532	84459251	84423532	84459251	-	transcript3311.chr2.nic@SUCLG1	transcript3311.chr2.nic	protein_coding	84459173,84449649,84443284,84441247,84441047,84431508,84423532	84459251,84449752,84443400,84441459,84441104,84433435,84425603	Gene ID= ENSG00000163541.11 TPM= 2.34 Transcript Type= NA
chr2	84433623	84439202	84433623	84439202	+	transcript3312.chr2.nnic@NA	transcript3312.chr2.nnic	NA	84433623	84439202	Gene ID= novel_gene_chr2_3313 TPM= 7.01 Transcript Type= NA
chr2	84821666	84881245	84821666	84881245	-	ENST00000409520.6@TRABD2A	ENST00000409520.6	protein_coding	84880932,84870225,84841861,84839149,84832055,84823953,84821666	84881245,84870785,84842007,84839323,84832145,84824204,84822100	Gene ID= ENSG00000186854.10 TPM= 2.34 Transcript Type= protein_coding
chr2	84821650	84881245	84821650	84881245	-	ENST00000335459.9@TRABD2A	ENST00000335459.9	protein_coding	84880932,84870225,84839149,84832055,84823953,84821650	84881245,84870785,84839323,84832145,84824204,84822100	Gene ID= ENSG00000186854.10 TPM= 1.17 Transcript Type= protein_coding
chr2	84905625	84906675	84905625	84906675	+	ENST00000233143.5@TMSB10	ENST00000233143.5	protein_coding	84905625,84906003,84906389	84905718,84906117,84906675	Gene ID= ENSG00000034510.5 TPM= 1544.73 Transcript Type= protein_coding
chr2	84971502	85053772	84971502	85053772	+	transcript3332.chr2.nic@KCMF1	transcript3332.chr2.nic	protein_coding	84971502,85027889,85035016,85043564,85046104,85049366,85053148	84972240,85028056,85035155,85043665,85046278,85049648,85053772	Gene ID= ENSG00000176407.17 TPM= 11.68 Transcript Type= NA
chr2	85133410	85310388	85133410	85310388	+	ENST00000282111.3@TCF7L1	ENST00000282111.3	protein_coding	85133410,85134016,85134323,85283495,85302484,85303895,85304255,85305260,85306206,85306452,85307642,85309029	85133933,85134079,85134450,85283578,85302616,85303997,85304338,85305403,85306365,85306559,85307717,85310388	Gene ID= ENSG00000152284.4 TPM= 26.85 Transcript Type= protein_coding
chr2	85194313	85198876	85194313	85198876	+	transcript3347.chr2.nnic@NA	transcript3347.chr2.nnic	NA	85194313	85198876	Gene ID= novel_gene_chr2_3348 TPM= 2.34 Transcript Type= NA
chr2	85311666	85314943	85311666	85314943	-	transcript3365.chr2.nnic@NA	transcript3365.chr2.nnic	NA	85311666	85314943	Gene ID= novel_gene_chr2_3366 TPM= 5.84 Transcript Type= NA
chr2	85318024	85328425	85318024	85328425	-	ENST00000377386.7@TGOLN2	ENST00000377386.7	protein_coding	85327917,85326508,85324915,85318024	85328425,85327685,85324998,85322741	Gene ID= ENSG00000152291.13 TPM= 174.56 Transcript Type= protein_coding
chr2	85321894	85328024	85321894	85328024	-	ENST00000409232.7@TGOLN2	ENST00000409232.7	protein_coding	85327917,85326508,85324915,85321894	85328024,85327685,85324998,85322758	Gene ID= ENSG00000152291.13 TPM= 5.84 Transcript Type= protein_coding
chr2	85342088	85354620	85342088	85354620	-	ENST00000295802.8@RETSAT	ENST00000295802.8	protein_coding	85354336,85351680,85350780,85350040,85349384,85345975,85344594,85344239,85343999,85343639,85342088	85354620,85351862,85351021,85350241,85349581,85346094,85344732,85344348,85344165,85343798,85343381	Gene ID= ENSG00000042445.13 TPM= 78.23 Transcript Type= protein_coding
chr2	85354720	85391748	85354720	85391748	+	ENST00000409013.7@ELMOD3	ENST00000409013.7	protein_coding	85354720,85355076,85355555,85356967,85362186,85363097,85368686,85369739,85371086,85371440,85377344,85389751,85390138,85390760	85354829,85355170,85355598,85357252,85362260,85363166,85368754,85369830,85371209,85371562,85377474,85389827,85390265,85391748	Gene ID= ENSG00000115459.17 TPM= 5.16 Transcript Type= protein_coding
chr2	85354733	85391748	85354733	85391748	+	transcript3370.chr2.nic@ELMOD3	transcript3370.chr2.nic	protein_coding	85354733,85355076,85355555,85356967,85362186,85363097,85368686,85369739,85371086,85371440,85377344,85389751,85390138,85390760	85354829,85355170,85355716,85357252,85362260,85363166,85368754,85369830,85371209,85371562,85377474,85389827,85390265,85391748	Gene ID= ENSG00000115459.17 TPM= 2.83 Transcript Type= NA
chr2	85354735	85391748	85354735	85391748	+	transcript3378.chr2.nic@ELMOD3	transcript3378.chr2.nic	protein_coding	85354735,85355555,85356967,85362186,85363097,85368686,85369739,85371086,85371440,85377344,85389751,85390138,85390760	85354829,85355598,85357252,85362260,85363166,85368754,85369830,85371209,85371562,85377474,85389827,85390265,85391748	Gene ID= ENSG00000115459.17 TPM= 3.99 Transcript Type= NA
chr2	85354735	85391748	85354735	85391748	+	transcript3380.chr2.nic@ELMOD3	transcript3380.chr2.nic	protein_coding	85354735,85355555,85356967,85362186,85363097,85368686,85369739,85371086,85371440,85377344,85389751,85390138,85390760	85354829,85356533,85357252,85362260,85363166,85368754,85369830,85371209,85371562,85377474,85389827,85390265,85391748	Gene ID= ENSG00000115459.17 TPM= 2.83 Transcript Type= NA
chr2	85354733	85391748	85354733	85391748	+	transcript3383.chr2.nic@ELMOD3	transcript3383.chr2.nic	protein_coding	85354733,85355076,85356967,85362186,85363097,85368686,85369739,85371086,85377344,85389751,85390138,85390760	85354829,85355170,85357252,85362260,85363166,85368754,85369830,85371209,85377474,85389827,85390265,85391748	Gene ID= ENSG00000115459.17 TPM= 2.63 Transcript Type= NA
chr2	85354735	85391748	85354735	85391748	+	transcript3387.chr2.nic@ELMOD3	transcript3387.chr2.nic	protein_coding	85354735,85355555,85356967,85362186,85363097,85368686,85369739,85371086,85371440,85377344,85389751,85390138	85354829,85355598,85357252,85362260,85363166,85368754,85369830,85371209,85371562,85377474,85389827,85391748	Gene ID= ENSG00000115459.17 TPM= 2.46 Transcript Type= NA
chr2	85354735	85391748	85354735	85391748	+	transcript3388.chr2.nic@ELMOD3	transcript3388.chr2.nic	protein_coding	85354735,85355555,85356967,85362186,85368686,85369739,85371086,85377344,85387098,85389751,85390138,85390760	85354829,85356533,85357252,85362260,85368754,85369830,85371209,85377474,85387225,85389827,85390265,85391748	Gene ID= ENSG00000115459.17 TPM= 2.46 Transcript Type= NA
chr2	85354751	85391748	85354751	85391748	+	transcript3389.chr2.nic@ELMOD3	transcript3389.chr2.nic	protein_coding	85354751,85356967,85362186,85363097,85368686,85369739,85371086,85371440,85377344,85389751,85390138,85390760	85354829,85357252,85362260,85363166,85368754,85369830,85371209,85371562,85377474,85389827,85390265,85391748	Gene ID= ENSG00000115459.17 TPM= 2.83 Transcript Type= NA
chr2	85354733	85356895	85354733	85356895	+	transcript3418.chr2.nic@ELMOD3	transcript3418.chr2.nic	protein_coding	85354733,85355076	85354829,85356895	Gene ID= ENSG00000115459.17 TPM= 2.34 Transcript Type= NA
chr2	85354757	85391748	85354757	85391748	+	ENST00000393852.8@ELMOD3	ENST00000393852.8	protein_coding	85354757,85355076,85356967,85362186,85363097,85368686,85369739,85371086,85371440,85377344,85389751,85390138,85390760	85354829,85355170,85357252,85362260,85363166,85368754,85369830,85371209,85371562,85377474,85389827,85390265,85391748	Gene ID= ENSG00000115459.17 TPM= 5.16 Transcript Type= protein_coding
chr2	85394748	85410553	85394748	85410553	-	ENST00000263867.8@CAPG	ENST00000263867.8	protein_coding	85410317,85402123,85401785,85401529,85401165,85399136,85398690,85398020,85395538,85394748	85410553,85402158,85401957,85401683,85401329,85399285,85398782,85398152,85395626,85394958	Gene ID= ENSG00000042493.15 TPM= 426.7 Transcript Type= protein_coding
chr2	85539165	85545280	85539165	85545280	+	transcript3439.chr2.nic@MAT2A	transcript3439.chr2.nic	protein_coding	85539165,85541083,85541255,85541633,85541829,85542155,85542565,85542901	85539378,85541160,85541377,85541745,85541972,85542373,85542747,85545280	Gene ID= ENSG00000168906.12 TPM= 60.71 Transcript Type= NA
chr2	85539165	85545280	85539165	85545280	+	transcript3440.chr2.nic@MAT2A	transcript3440.chr2.nic	protein_coding	85539165,85541083,85541255,85541633,85541829,85542155,85542565	85539378,85541160,85541377,85541745,85541972,85542373,85545280	Gene ID= ENSG00000168906.12 TPM= 13.43 Transcript Type= NA
chr2	85539168	85545280	85539168	85545280	+	transcript3444.chr2.nic@MAT2A	transcript3444.chr2.nic	protein_coding	85539168,85541083,85541255,85541633,85541829,85542155	85539378,85541160,85541377,85541745,85541972,85545280	Gene ID= ENSG00000168906.12 TPM= 20.43 Transcript Type= NA
chr2	85539165	85545280	85539165	85545280	+	ENST00000306434.7@MAT2A	ENST00000306434.7	protein_coding	85539165,85541083,85541255,85541633,85541829,85542155,85542565,85542901,85543670	85539378,85541160,85541377,85541745,85541972,85542373,85542747,85543034,85545280	Gene ID= ENSG00000168906.12 TPM= 260.96 Transcript Type= protein_coding
chr2	85558725	85561547	85558725	85561547	-	ENST00000496962.1@GGCX	ENST00000496962.1	protein_coding	85561386,85560815,85558725	85561547,85560985,85559075	Gene ID= ENSG00000115486.11 TPM= 3.5 Transcript Type= processed_transcript
chr2	85544723	85561509	85544723	85561509	-	ENST00000233838.8@GGCX	ENST00000233838.8	protein_coding	85561386,85560815,85558917,85558440,85556182,85555484,85554143,85553232,85552939,85552416,85551812,85551480,85550925,85550555,85544723	85561509,85560985,85559075,85558605,85556260,85555590,85554306,85553497,85553070,85552567,85551981,85551610,85551072,85550750,85550126	Gene ID= ENSG00000115486.11 TPM= 7.01 Transcript Type= protein_coding
chr2	85577491	85582031	85577491	85582031	+	ENST00000263864.9@VAMP8	ENST00000263864.9	protein_coding	85577491,85579009,85581576	85577649,85579167,85582031	Gene ID= ENSG00000118640.10 TPM= 99.25 Transcript Type= protein_coding
chr2	85577593	85582031	85577593	85582031	+	ENST00000409760.1@VAMP8	ENST00000409760.1	protein_coding	85577593,85579009,85579742,85581576	85577649,85579167,85579874,85582031	Gene ID= ENSG00000118640.10 TPM= 4.67 Transcript Type= protein_coding
chr2	85584408	85593412	85584408	85593412	+	ENST00000306384.4@VAMP5	ENST00000306384.4	protein_coding	85584408,85591725,85592948	85584493,85591862,85593412	Gene ID= ENSG00000168899.4 TPM= 85.23 Transcript Type= protein_coding
chr2	85584419	85593385	85584419	85593385	+	transcript3854.chr2.nnic@VAMP5	transcript3854.chr2.nnic	protein_coding	85584419,85592948	85584493,85593385	Gene ID= ENSG00000168899.4 TPM= 2.34 Transcript Type= NA
chr2	85595734	85597581	85595734	85597581	+	ENST00000306368.8@RNF181	ENST00000306368.8	protein_coding	85595734,85596519,85596822,85597104,85597445	85595849,85596649,85596931,85597178,85597581	Gene ID= ENSG00000168894.9 TPM= 44.37 Transcript Type= protein_coding
chr2	85598547	85600876	85598547	85600876	-	transcript3880.chr2.nnic@NA	transcript3880.chr2.nnic	NA	85598547	85600876	Gene ID= novel_gene_chr2_3881 TPM= 4.67 Transcript Type= NA
chr2	85598548	85602408	85598548	85602408	-	transcript3764.chr2.nnic@TMEM150A	transcript3764.chr2.nnic	protein_coding	85602296,85601884,85601435,85601021,85600345,85599891,85599525,85598548	85602408,85602064,85601482,85601107,85600412,85600018,85599702,85599317	Gene ID= ENSG00000168890.13 TPM= 9.87 Transcript Type= NA
chr2	85598548	85602671	85598548	85602671	-	transcript3803.chr2.nic@TMEM150A	transcript3803.chr2.nic	protein_coding	85601884,85601021,85600345,85599891,85599525,85598548	85602671,85601482,85600412,85600018,85599702,85599317	Gene ID= ENSG00000168890.13 TPM= 5.2 Transcript Type= NA
chr2	85598549	85602669	85598549	85602669	-	ENST00000431593.5@TMEM150A	ENST00000431593.5	protein_coding	85601884,85601021,85599891,85599525,85598549	85602669,85601482,85600018,85599702,85599317	Gene ID= ENSG00000168890.13 TPM= 1.46 Transcript Type= retained_intron
chr2	85598548	85602698	85598548	85602698	-	ENST00000306353.7@TMEM150A	ENST00000306353.7	protein_coding	85602607,85601884,85601435,85601021,85599891,85599525,85598548	85602698,85602064,85601482,85601107,85600018,85599702,85599317	Gene ID= ENSG00000168890.13 TPM= 7.3 Transcript Type= protein_coding
chr2	85598562	85602678	85598562	85602678	-	ENST00000334462.9@TMEM150A	ENST00000334462.9	protein_coding	85602607,85601884,85601435,85601021,85600345,85599891,85599525,85598562	85602678,85602064,85601482,85601107,85600412,85600018,85599702,85599317	Gene ID= ENSG00000168890.13 TPM= 28.26 Transcript Type= protein_coding
chr2	85598578	85602659	85598578	85602659	-	ENST00000444380.5@TMEM150A	ENST00000444380.5	protein_coding	85602607,85601884,85601021,85600345,85599891,85599525,85598578	85602659,85602064,85601482,85600412,85600018,85599702,85599317	Gene ID= ENSG00000168890.13 TPM= 2.57 Transcript Type= retained_intron
chr2	85598584	85602416	85598584	85602416	-	ENST00000409668.1@TMEM150A	ENST00000409668.1	protein_coding	85601884,85601435,85601021,85600345,85599891,85599525,85598584	85602416,85601482,85601107,85600412,85600018,85599702,85599317	Gene ID= ENSG00000168890.13 TPM= 4.9 Transcript Type= protein_coding
chr2	85602438	85605306	85602438	85605306	+	transcript3864.chr2.nnic@NA	transcript3864.chr2.nnic	NA	85602438	85605306	Gene ID= novel_gene_chr2_3865 TPM= 7.01 Transcript Type= NA
chr2	85616145	85649280	85616145	85649280	+	transcript3457.chr2.nic@USP39	transcript3457.chr2.nic	protein_coding	85616145,85619220,85621485,85623646,85625539,85630721,85636053,85637369,85639203,85640976,85644948,85645814,85647930,85648761	85616463,85619289,85621579,85623782,85625691,85630946,85636130,85637436,85639391,85641118,85645083,85645899,85648016,85649280	Gene ID= ENSG00000168883.19 TPM= 3.5 Transcript Type= NA
chr2	85602443	85649280	85602443	85649280	+	transcript3460.chr2.nic@USP39	transcript3460.chr2.nic	protein_coding	85602443,85619220,85621485,85623646,85625539,85630721,85636053,85637369,85639203,85640976,85644948,85647930,85648761	85603081,85619289,85621579,85623782,85625691,85630946,85636130,85637436,85639391,85641118,85645083,85648016,85649280	Gene ID= ENSG00000168883.19 TPM= 13.81 Transcript Type= NA
chr2	85602856	85649280	85602856	85649280	+	ENST00000459775.5@USP39	ENST00000459775.5	protein_coding	85602856,85619220,85621485,85623626,85625539,85630721,85636053,85637369,85639203,85640976,85644948,85647930,85648761	85603081,85619289,85621579,85623782,85625691,85630946,85636130,85637436,85639391,85641118,85645083,85648016,85649280	Gene ID= ENSG00000168883.19 TPM= 20.23 Transcript Type= processed_transcript
chr2	85616186	85649277	85616186	85649277	+	ENST00000323701.10@USP39	ENST00000323701.10	protein_coding	85616186,85619220,85621485,85623646,85625539,85630721,85636053,85637369,85639203,85640976,85644948,85647930,85648761	85616463,85619289,85621579,85623782,85625691,85630946,85636130,85637436,85639391,85641118,85645083,85648016,85649277	Gene ID= ENSG00000168883.19 TPM= 65.19 Transcript Type= protein_coding
chr2	85616169	85649280	85616169	85649280	+	ENST00000409470.5@USP39	ENST00000409470.5	protein_coding	85616169,85619220,85621485,85623646,85625539,85630721,85636053,85637369,85639203,85640976,85644948,85647930,85648761,85649017	85616463,85619289,85621579,85623782,85625691,85630946,85636130,85637436,85639391,85641118,85645083,85648016,85648853,85649280	Gene ID= ENSG00000168883.19 TPM= 2.34 Transcript Type= protein_coding
chr2	85606654	85612029	85606654	85612029	-	ENST00000306336.5@C2orf68	ENST00000306336.5	protein_coding	85611878,85611668,85609435,85606654	85612029,85611786,85609586,85609067	Gene ID= ENSG00000168887.10 TPM= 49.04 Transcript Type= protein_coding
chr2	85657679	85668353	85657679	85668353	-	transcript3532.chr2.nic@SFTPB	transcript3532.chr2.nic	protein_coding	85668117,85667679,85667106,85666617,85665606,85665289,85663664,85663346,85662029,85661454,85657679	85668353,85667806,85667177,85666742,85665794,85665378,85663847,85663491,85662109,85661535,85658855	Gene ID= ENSG00000168878.16 TPM= 903.75 Transcript Type= NA
chr2	85658255	85668172	85658255	85668172	-	ENST00000428225.5@SFTPB	ENST00000428225.5	protein_coding	85668117,85667679,85667106,85666617,85665606,85665289,85663664,85663346,85662029,85661454,85658255	85668172,85667806,85667177,85666742,85665794,85665378,85663847,85663479,85662109,85661535,85658855	Gene ID= ENSG00000168878.16 TPM= 802.56 Transcript Type= protein_coding
chr2	85659575	85672306	85659575	85672306	+	transcript3840.chr2.nnic@NA	transcript3840.chr2.nnic	NA	85659575,85662774,85672190	85660598,85662877,85672306	Gene ID= novel_gene_chr2_3841 TPM= 29.19 Transcript Type= NA
chr2	85659575	85672306	85659575	85672306	+	transcript3921.chr2.nnic@NA	transcript3921.chr2.nnic	NA	85659575,85662774,85672190	85660598,85662877,85672306	Gene ID= novel_gene_chr2_3922 TPM= 2.34 Transcript Type= NA
chr2	85694291	85698854	85694291	85698854	+	ENST00000263863.8@GNLY	ENST00000263863.8	protein_coding	85694291,85695320,85695958,85697506,85698564	85694470,85695423,85696056,85697677,85698854	Gene ID= ENSG00000115523.16 TPM= 9.34 Transcript Type= protein_coding
chr2	85694390	85698747	85694390	85698747	+	transcript3908.chr2.nic@GNLY	transcript3908.chr2.nic	protein_coding	85694390,85694916,85695320,85695958	85694470,85694996,85695423,85698747	Gene ID= ENSG00000115523.16 TPM= 9.34 Transcript Type= NA
chr2	85694426	85698757	85694426	85698757	+	ENST00000409696.7@GNLY	ENST00000409696.7	protein_coding	85694426,85694753,85695320,85695958,85697506,85698564	85694470,85694996,85695423,85696056,85697677,85698757	Gene ID= ENSG00000115523.16 TPM= 7.01 Transcript Type= protein_coding
chr2	85753752	85775210	85753752	85775210	+	transcript3929.chr2.nnic@ATOH8	transcript3929.chr2.nnic	protein_coding	85753752,85763991,85772862	85754957,85764182,85775210	Gene ID= ENSG00000168874.12 TPM= 4.67 Transcript Type= NA
chr2	85753894	85788066	85753894	85788066	+	ENST00000306279.3@ATOH8	ENST00000306279.3	protein_coding	85753894,85763991,85786885	85754957,85764182,85788066	Gene ID= ENSG00000168874.12 TPM= 143.03 Transcript Type= protein_coding
chr2	85757788	85765700	85757788	85765700	-	transcript3940.chr2.nnic@NA	transcript3940.chr2.nnic	NA	85757788	85765700	Gene ID= novel_gene_chr2_3941 TPM= 2.34 Transcript Type= NA
chr2	85837120	85889055	85837120	85889055	-	ENST00000638572.1@ST3GAL5	ENST00000638572.1	protein_coding	85888824,85863362,85861181,85847861,85846377,85844396,85837120	85889055,85863485,85861292,85848204,85846563,85844554,85840392	Gene ID= ENSG00000115525.17 TPM= 58.38 Transcript Type= protein_coding
chr2	85850912	85889029	85850912	85889029	-	transcript3906.chr2.nic@ST3GAL5	transcript3906.chr2.nic	protein_coding	85888824,85863362,85861181,85852860,85850912	85889029,85863485,85861292,85853099,85851703	Gene ID= ENSG00000115525.17 TPM= 2.34 Transcript Type= NA
chr2	85839194	85889000	85839194	85889000	-	ENST00000638227.1@ST3GAL5	ENST00000638227.1	protein_coding	85888824,85870072,85863362,85861181,85847861,85846377,85844396,85839194	85889000,85870258,85863485,85861292,85848204,85846563,85844554,85840392	Gene ID= ENSG00000115525.17 TPM= 4.67 Transcript Type= nonsense_mediated_decay
chr2	85839169	85888958	85839169	85888958	-	ENST00000377332.8@ST3GAL5	ENST00000377332.8	protein_coding	85888824,85863362,85861181,85847861,85846377,85844396,85839169	85888958,85863485,85861292,85848084,85846563,85844554,85840392	Gene ID= ENSG00000115525.17 TPM= 1.17 Transcript Type= protein_coding
chr2	85839196	85888939	85839196	85888939	-	ENST00000638885.1@ST3GAL5	ENST00000638885.1	protein_coding	85888824,85863362,85861181,85847861,85847382,85846377,85844396,85839196	85888939,85863485,85861292,85848381,85847562,85846563,85844554,85840392	Gene ID= ENSG00000115525.17 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr2	85859009	85860843	85859009	85860843	+	transcript3938.chr2.nnic@NA	transcript3938.chr2.nnic	NA	85859009	85860843	Gene ID= novel_gene_chr2_3939 TPM= 2.34 Transcript Type= NA
chr2	86106182	86142157	86106182	86142157	+	ENST00000254630.11@PTCD3	ENST00000254630.11	protein_coding	86106182,86108350,86108500,86111113,86116530,86117055,86118921,86121479,86123701,86124995,86125455,86125795,86127161,86127941,86130648,86131078,86132318,86133178,86133346,86134292,86134839,86136521,86136982,86137469	86106351,86108402,86108536,86111158,86116598,86117159,86119044,86121594,86123762,86125082,86125515,86125880,86127305,86127991,86130737,86131106,86132424,86133256,86133436,86134377,86134987,86136562,86137140,86142157	Gene ID= ENSG00000132300.18 TPM= 2.34 Transcript Type= protein_coding
chr2	86106223	86138188	86106223	86138188	+	transcript3957.chr2.nic@PTCD3	transcript3957.chr2.nic	protein_coding	86106223,86108350,86108500,86111113,86116530,86117055,86118921,86121479,86123701,86124995,86125455,86125795,86127161,86130648,86131078,86132318,86133178,86133346,86134292,86134839,86136521,86136982,86137469	86106351,86108402,86108536,86111158,86116598,86117159,86119044,86121594,86123762,86125082,86125515,86125880,86127991,86130737,86131106,86132424,86133256,86133436,86134377,86134987,86136562,86137140,86138188	Gene ID= ENSG00000132300.18 TPM= 3.5 Transcript Type= NA
chr2	86143932	86195770	86143932	86195770	-	ENST00000410111.7@IMMT	ENST00000410111.7	protein_coding	86195338,86181299,86179433,86173650,86171208,86170749,86166508,86161976,86159536,86158592,86153560,86151297,86147702,86146068,86143932	86195770,86181372,86179622,86173761,86171345,86170844,86166644,86162079,86159671,86158721,86153574,86151520,86147833,86146197,86144881	Gene ID= ENSG00000132305.20 TPM= 37.95 Transcript Type= protein_coding
chr2	86143936	86195489	86143936	86195489	-	transcript3967.chr2.nnic@IMMT	transcript3967.chr2.nnic	protein_coding	86195338,86181299,86179433,86173650,86171208,86170749,86166508,86161952,86159536,86153560,86151297,86147702,86146068,86143936	86195489,86181372,86179622,86173761,86171345,86170844,86166644,86162079,86159671,86153574,86151520,86147833,86146197,86144881	Gene ID= ENSG00000132305.20 TPM= 2.34 Transcript Type= NA
chr2	86143932	86195472	86143932	86195472	-	ENST00000449247.6@IMMT	ENST00000449247.6	protein_coding	86195338,86181299,86179433,86173650,86171208,86170749,86166508,86161976,86159536,86158592,86153560,86151297,86147702,86146068,86143932	86195472,86181372,86179622,86173761,86171312,86170844,86166644,86162079,86159671,86158721,86153574,86151520,86147833,86146197,86144881	Gene ID= ENSG00000132305.20 TPM= 63.63 Transcript Type= protein_coding
chr2	86199457	86213794	86199457	86213794	+	ENST00000337109.8@MRPL35	ENST00000337109.8	protein_coding	86199457,86206106,86207183,86210480	86199533,86206295,86207327,86213794	Gene ID= ENSG00000132313.14 TPM= 4.67 Transcript Type= protein_coding
chr2	86213993	86337618	86213993	86337618	-	transcript3978.chr2.nnic@REEP1	transcript3978.chr2.nnic	protein_coding	86337479,86282170,86263965,86254694,86251957,86232625,86227363,86213993	86337618,86282242,86264041,86254814,86252070,86232802,86227398,86217110	Gene ID= ENSG00000068615.17 TPM= 2.34 Transcript Type= NA
chr2	86213993	86337654	86213993	86337654	-	ENST00000165698.9@REEP1	ENST00000165698.9	protein_coding	86337479,86282170,86263965,86254694,86251957,86232625,86213993	86337654,86282242,86264041,86254814,86252070,86232802,86217110	Gene ID= ENSG00000068615.17 TPM= 1.17 Transcript Type= protein_coding
chr2	86440801	86492716	86440801	86492716	+	ENST00000409556.5@KDM3A	ENST00000409556.5	protein_coding	86440801,86441272,86442018,86449807,86451103,86455085,86456442,86456805,86456983,86464053,86466372,86470204,86474776,86477877,86478170,86478608,86480167,86481930,86482458,86483987,86484942,86485729,86489318,86489520,86490881,86491141,86492039	86440962,86441444,86442233,86449962,86451213,86455187,86456566,86456877,86457071,86464216,86466883,86470408,86474990,86478029,86478265,86478735,86480362,86482102,86482694,86484158,86485029,86485859,86489437,86489659,86491057,86491275,86492716	Gene ID= ENSG00000115548.16 TPM= 31.53 Transcript Type= protein_coding
chr2	86441461	86492716	86441461	86492716	+	ENST00000409064.5@KDM3A	ENST00000409064.5	protein_coding	86441461,86442018,86449807,86451103,86455085,86456442,86456805,86456983,86464053,86466372,86470204,86474776,86477877,86478170,86478608,86480167,86481930,86482458,86483987,86484942,86485729,86489318,86489520,86490881,86491141,86492039	86441488,86442233,86449962,86451213,86455187,86456566,86456877,86457071,86464216,86466883,86470408,86474990,86478029,86478265,86478735,86480362,86482102,86482694,86484158,86485029,86485859,86489437,86489659,86491057,86491275,86492716	Gene ID= ENSG00000115548.16 TPM= 7.01 Transcript Type= protein_coding
chr2	86447290	86451724	86447290	86451724	-	transcript3989.chr2.nnic@NA	transcript3989.chr2.nnic	NA	86447290	86451724	Gene ID= novel_gene_chr2_3990 TPM= 2.34 Transcript Type= NA
chr2	86499591	86504451	86499591	86504451	-	transcript4018.chr2.nnic@NA	transcript4018.chr2.nnic	NA	86499591	86504451	Gene ID= novel_gene_chr2_4019 TPM= 9.34 Transcript Type= NA
chr2	86505444	86563479	86505444	86563479	-	ENST00000409225.2@CHMP3	ENST00000409225.2	protein_coding	86563304,86529218,86510358,86507479,86505444	86563479,86529397,86510479,86507593,86505949	Gene ID= ENSG00000115561.15 TPM= 3.5 Transcript Type= protein_coding
chr2	86544341	86546131	86544341	86546131	-	transcript4014.chr2.nnic@CHMP3	transcript4014.chr2.nnic	protein_coding	86545546,86545099,86544341	86546131,86545505,86544981	Gene ID= ENSG00000115561.15 TPM= 2.34 Transcript Type= NA
chr2	86503431	86563477	86503431	86563477	-	ENST00000263856.8@CHMP3	ENST00000263856.8	protein_coding	86563304,86542252,86529218,86510358,86507479,86503431	86563477,86542312,86529397,86510479,86507593,86505949	Gene ID= ENSG00000115561.15 TPM= 23.35 Transcript Type= protein_coding
chr2	86556504	86558883	86556504	86558883	+	transcript4016.chr2.nnic@NA	transcript4016.chr2.nnic	NA	86556504	86558883	Gene ID= novel_gene_chr2_4017 TPM= 7.01 Transcript Type= NA
chr2	86603393	86623855	86603393	86623855	-	ENST00000237455.4@RNF103	ENST00000237455.4	protein_coding	86622661,86620330,86612159,86603393	86623855,86620469,86612274,86605418	Gene ID= ENSG00000239305.6 TPM= 93.99 Transcript Type= protein_coding
chr2	86784610	86791680	86784610	86791680	-	ENST00000283635.7@CD8A	ENST00000283635.7	protein_coding	86790777,86790328,86789640,86789323,86788530,86784610	86791680,86790681,86789750,86789433,86788560,86785971	Gene ID= ENSG00000153563.15 TPM= 11.09 Transcript Type= protein_coding
chr2	86784610	86790895	86784610	86790895	-	ENST00000352580.7@CD8A	ENST00000352580.7	protein_coding	86790777,86790328,86789640,86788530,86784610	86790895,86790681,86789750,86788560,86785971	Gene ID= ENSG00000153563.15 TPM= 2.92 Transcript Type= protein_coding
chr2	86841582	86861924	86841582	86861924	-	ENST00000390655.10@CD8B	ENST00000390655.10	protein_coding	86861823,86858057,86852997,86846684,86844922,86841582	86861924,86858416,86853086,86846773,86844958,86842319	Gene ID= ENSG00000172116.21 TPM= 3.5 Transcript Type= protein_coding
chr2	87010432	87076575	87010432	87076575	-	transcript4035.chr2.nnic@AC125232.1	transcript4035.chr2.nnic	unprocessed_pseudogene	87075919,87055658,87052814,87049589,87047188,87043713,87037294,87034152,87032069,87031816,87023455,87022161,87017553,87016302,87013005,87010432	87076575,87055800,87052992,87049803,87047306,87043984,87037528,87034243,87032203,87031898,87023533,87022353,87017688,87016408,87013119,87011206	Gene ID= ENSG00000231259.4 TPM= 2.34 Transcript Type= NA
chr2	87002559	87076422	87002559	87076422	-	transcript4038.chr2.nnic@AC125232.1	transcript4038.chr2.nnic	unprocessed_pseudogene	87075919,87055658,87052814,87049589,87047188,87043713,87037294,87034152,87032069,87031816,87017553,87016302,87002559	87076422,87055800,87052992,87049803,87047306,87043984,87037528,87034243,87032203,87031898,87017688,87016408,87003208	Gene ID= ENSG00000231259.4 TPM= 2.34 Transcript Type= NA
chr2	87030675	87076575	87030675	87076575	-	transcript4039.chr2.nnic@AC125232.1	transcript4039.chr2.nnic	unprocessed_pseudogene	87075919,87055658,87052814,87049589,87047188,87043713,87037294,87034152,87032069,87031816,87030675	87076575,87055800,87052992,87049803,87047306,87043984,87037528,87034243,87032203,87031898,87030907	Gene ID= ENSG00000231259.4 TPM= 5.84 Transcript Type= NA
chr2	87439523	87459044	87439523	87459044	-	ENST00000625410.1@LINC01943	ENST00000625410.1	lincRNA	87458857,87439523	87459044,87439893	Gene ID= ENSG00000280721.1 TPM= 1.17 Transcript Type= lincRNA
chr2	87455429	87521518	87455429	87521518	+	ENST00000331944.10@CYTOR	ENST00000331944.10	lincRNA	87455429,87521207	87455645,87521518	Gene ID= ENSG00000222041.10 TPM= 8.17 Transcript Type= lincRNA
chr2	87455462	87739249	87455462	87739249	+	transcript4044.chr2.nnic@AC093616.1	transcript4044.chr2.nnic	unprocessed_pseudogene	87455462,87583258,87606593,87700984,87704333,87707762,87713359,87714048,87714179,87716612,87719832,87722301,87725937,87732387,87735674,87737718,87738023,87739017	87455645,87583346,87606769,87701053,87704600,87707910,87713437,87714084,87714249,87716790,87720021,87722419,87726208,87732621,87735765,87737852,87738105,87739249	Gene ID= ENSG00000234231.3 TPM= 3.5 Transcript Type= NA
chr2	87455463	87459367	87455463	87459367	-	transcript4054.chr2.nnic@NA	transcript4054.chr2.nnic	NA	87455463	87459367	Gene ID= novel_gene_chr2_4055 TPM= 2.34 Transcript Type= NA
chr2	87755955	87825952	87755955	87825952	-	ENST00000398146.3@RGPD2	ENST00000398146.3	protein_coding	87825658,87818559,87816866,87816269,87811976,87811485,87806696,87800605,87797965,87795667,87795408,87795117,87794035,87793631,87793222,87792162,87791990,87788722,87785075,87782124,87774944,87772169,87755955	87825952,87818623,87816977,87816421,87812206,87811630,87806891,87800692,87798174,87795848,87795583,87795240,87794193,87793768,87793368,87792341,87792073,87788839,87785169,87784347,87775083,87772364,87757426	Gene ID= ENSG00000185304.14 TPM= 2.34 Transcript Type= protein_coding
chr2	88027205	88055792	88027205	88055792	-	transcript4061.chr2.nnic@KRCC1	transcript4061.chr2.nnic	protein_coding	88055626,88036943,88034134,88027205	88055792,88037051,88034231,88028585	Gene ID= ENSG00000172086.7 TPM= 8.17 Transcript Type= NA
chr2	88027205	88055729	88027205	88055729	-	ENST00000347055.3@KRCC1	ENST00000347055.3	protein_coding	88055626,88036943,88034134,88027205	88055729,88037051,88034292,88028585	Gene ID= ENSG00000172086.7 TPM= 29.19 Transcript Type= protein_coding
chr2	88170328	88186626	88170328	88186626	+	transcript4067.chr2.nic@THNSL2	transcript4067.chr2.nic	protein_coding	88170328,88173139,88174639,88175249,88178783,88182699,88182948,88185328,88185898	88170456,88173373,88174833,88175401,88179013,88182847,88183073,88185479,88186626	Gene ID= ENSG00000144115.16 TPM= 5.84 Transcript Type= NA
chr2	88170328	88186636	88170328	88186636	+	transcript4068.chr2.nic@THNSL2	transcript4068.chr2.nic	protein_coding	88170328,88173139,88174639,88175249,88178783,88182699,88182948,88185898	88170456,88173373,88174833,88175401,88179013,88182847,88183073,88186636	Gene ID= ENSG00000144115.16 TPM= 5.84 Transcript Type= NA
chr2	88556743	88627576	88556743	88627576	-	ENST00000303236.7@EIF2AK3	ENST00000303236.7	protein_coding	88626967,88613724,88595469,88593272,88590818,88590443,88588761,88587982,88585841,88583430,88579518,88576554,88574666,88570874,88562289,88558917,88556743	88627576,88613853,88595663,88593405,88591052,88590605,88588901,88588104,88586061,88583542,88579640,88576703,88575446,88571041,88562390,88558979,88557936	Gene ID= ENSG00000172071.11 TPM= 26.85 Transcript Type= protein_coding
chr2	88623999	88628156	88623999	88628156	-	transcript4080.chr2.nnic@NA	transcript4080.chr2.nnic	NA	88623999	88628156	Gene ID= novel_gene_chr2_4081 TPM= 2.34 Transcript Type= NA
chr2	88691644	88750935	88691644	88750935	+	ENST00000283646.4@RPIA	ENST00000283646.4	protein_coding	88691644,88698484,88700009,88729278,88734552,88735669,88736535,88737977,88749981	88691983,88698544,88700064,88729337,88734616,88735737,88736676,88738076,88750935	Gene ID= ENSG00000153574.8 TPM= 19.85 Transcript Type= protein_coding
chr2	88857166	89143142	88857166	89143142	-	transcript4257.chr2.nnic@AC244205.1	transcript4257.chr2.nnic	processed_transcript	89143060,89027185,88861525,88857166	89143142,89027466,88861556,88857683	Gene ID= ENSG00000240040.6 TPM= 5.88 Transcript Type= NA
chr2	88857166	89143142	88857166	89143142	-	transcript4289.chr2.nnic@AC244205.1	transcript4289.chr2.nnic	processed_transcript	89143060,89027185,88861886,88857166	89143142,89027466,88861923,88857683	Gene ID= ENSG00000240040.6 TPM= 4.67 Transcript Type= NA
chr2	88857166	88966342	88857166	88966342	-	transcript4315.chr2.nnic@AC244205.1	transcript4315.chr2.nnic	processed_transcript	88966272,88861525,88857166	88966342,88861556,88857683	Gene ID= ENSG00000240040.6 TPM= 4.72 Transcript Type= NA
chr2	88857161	88857683	88857161	88857683	-	ENST00000390237.2@IGKC	ENST00000390237.2	IG_C_gene	88857161	88857683	Gene ID= ENSG00000211592.8 TPM= 28.02 Transcript Type= IG_C_gene
chr2	88857166	88947805	88857166	88947805	-	transcript4243.chr2.nnic@IGKV1-5	transcript4243.chr2.nnic	IG_V_gene	88947722,88947295,88861525,88857166	88947805,88947596,88861556,88857683	Gene ID= ENSG00000243466.1 TPM= 16.39 Transcript Type= NA
chr2	88857166	88947805	88857166	88947805	-	transcript4277.chr2.nnic@IGKV1-5	transcript4277.chr2.nnic	IG_V_gene	88947722,88947300,88861886,88857166	88947805,88947596,88861921,88857683	Gene ID= ENSG00000243466.1 TPM= 19.85 Transcript Type= NA
chr2	88857166	88966767	88857166	88966767	-	transcript4248.chr2.nnic@IGKV1-6	transcript4248.chr2.nnic	IG_V_gene	88966684,88966256,88861525,88857166	88966767,88966557,88861556,88857683	Gene ID= ENSG00000239855.1 TPM= 5.88 Transcript Type= NA
chr2	88857166	89010487	88857166	89010487	-	transcript4234.chr2.nnic@IGKV1-9	transcript4234.chr2.nnic	IG_V_gene	89010403,89009983,88861221,88857166	89010487,89010277,88861258,88857683	Gene ID= ENSG00000241755.1 TPM= 10.75 Transcript Type= NA
chr2	88857166	89010487	88857166	89010487	-	transcript4252.chr2.nnic@IGKV1-9	transcript4252.chr2.nnic	IG_V_gene	89010403,89009976,88861525,88857166	89010487,89010277,88861556,88857683	Gene ID= ENSG00000241755.1 TPM= 4.72 Transcript Type= NA
chr2	88857166	89027731	88857166	89027731	-	transcript4196.chr2.nnic@IGKV3-11	transcript4196.chr2.nnic	IG_V_gene	89027636,89027172,88860568,88857166	89027731,89027466,88860609,88857683	Gene ID= ENSG00000241351.3 TPM= 7.3 Transcript Type= NA
chr2	88857166	89027731	88857166	89027731	-	transcript4203.chr2.nnic@IGKV3-11	transcript4203.chr2.nnic	IG_V_gene	89027636,89027165,88860886,88857166	89027731,89027466,88860917,88857683	Gene ID= ENSG00000241351.3 TPM= 5.84 Transcript Type= NA
chr2	88857166	89027731	88857166	89027731	-	transcript4229.chr2.nnic@IGKV3-11	transcript4229.chr2.nnic	IG_V_gene	89027636,89027165,88861221,88857166	89027731,89027466,88861257,88857683	Gene ID= ENSG00000241351.3 TPM= 7.1 Transcript Type= NA
chr2	88857166	89027731	88857166	89027731	-	transcript4253.chr2.nnic@IGKV3-11	transcript4253.chr2.nnic	IG_V_gene	89027636,89027155,88861525,88857166	89027731,89027466,88861556,88857683	Gene ID= ENSG00000241351.3 TPM= 4.72 Transcript Type= NA
chr2	88857166	89027731	88857166	89027731	-	transcript4280.chr2.nnic@IGKV3-11	transcript4280.chr2.nnic	IG_V_gene	89027636,89027170,88861886,88857166	89027731,89027466,88861921,88857683	Gene ID= ENSG00000241351.3 TPM= 7.01 Transcript Type= NA
chr2	88857166	89085726	88857166	89085726	-	transcript4205.chr2.nnic@IGKV3-15	transcript4205.chr2.nnic	IG_V_gene	89085642,89085171,88860886,88857166	89085726,89085472,88860917,88857683	Gene ID= ENSG00000244437.1 TPM= 5.84 Transcript Type= NA
chr2	88857166	89085726	88857166	89085726	-	transcript4230.chr2.nnic@IGKV3-15	transcript4230.chr2.nnic	IG_V_gene	89085642,89085171,88861221,88857166	89085726,89085472,88861257,88857683	Gene ID= ENSG00000244437.1 TPM= 4.76 Transcript Type= NA
chr2	88857166	89085726	88857166	89085726	-	transcript4261.chr2.nnic@IGKV3-15	transcript4261.chr2.nnic	IG_V_gene	89085642,89085171,88861525,88857166	89085726,89085472,88861556,88857683	Gene ID= ENSG00000244437.1 TPM= 9.39 Transcript Type= NA
chr2	88857166	89222463	88857166	89222463	-	transcript4085.chr2.nnic@IGKV2-28	transcript4085.chr2.nnic	IG_V_gene	89222383,89221790,89027259,88931674,88860886,88857166	89222463,89222008,89027262,88931738,88860923,88857683	Gene ID= ENSG00000244116.3 TPM= 7.29 Transcript Type= NA
chr2	88857166	89222463	88857166	89222463	-	transcript4159.chr2.nnic@IGKV2-28	transcript4159.chr2.nnic	IG_V_gene	89222383,89221798,89020008,88861886,88857166	89222463,89222008,89020092,88861919,88857683	Gene ID= ENSG00000244116.3 TPM= 5.84 Transcript Type= NA
chr2	88857166	89222463	88857166	89222463	-	transcript4180.chr2.nnic@IGKV2-28	transcript4180.chr2.nnic	IG_V_gene	89222383,89221798,89078035,88861886,88857166	89222463,89222008,89078120,88861934,88857683	Gene ID= ENSG00000244116.3 TPM= 5.84 Transcript Type= NA
chr2	88857166	89222463	88857166	89222463	-	transcript4194.chr2.nnic@IGKV2-28	transcript4194.chr2.nnic	IG_V_gene	89222383,89221699,88860568,88857166	89222463,89222008,88860605,88857683	Gene ID= ENSG00000244116.3 TPM= 7.3 Transcript Type= NA
chr2	88857166	89222463	88857166	89222463	-	transcript4264.chr2.nnic@IGKV2-28	transcript4264.chr2.nnic	IG_V_gene	89222383,89221692,88861525,88857166	89222463,89222008,88861556,88857683	Gene ID= ENSG00000244116.3 TPM= 4.72 Transcript Type= NA
chr2	88857166	89245599	88857166	89245599	-	transcript4266.chr2.nnic@IGKV2-30	transcript4266.chr2.nnic	IG_V_gene	89245518,89244775,88861525,88857166	89245599,89245091,88861556,88857683	Gene ID= ENSG00000243238.1 TPM= 4.72 Transcript Type= NA
chr2	88857166	89268504	88857166	89268504	-	transcript4216.chr2.nnic@IGKV1-33	transcript4216.chr2.nnic	IG_V_gene	89268421,89268002,88860886,88857166	89268504,89268296,88860923,88857683	Gene ID= ENSG00000242076.2 TPM= 14.68 Transcript Type= NA
chr2	88857166	89268504	88857166	89268504	-	transcript4238.chr2.nnic@IGKV1-33	transcript4238.chr2.nnic	IG_V_gene	89268421,89267995,88861221,88857166	89268504,89268296,88861258,88857683	Gene ID= ENSG00000242076.2 TPM= 8.8 Transcript Type= NA
chr2	88857166	89268504	88857166	89268504	-	transcript4268.chr2.nnic@IGKV1-33	transcript4268.chr2.nnic	IG_V_gene	89268421,89267995,88861525,88857166	89268504,89268296,88861556,88857683	Gene ID= ENSG00000242076.2 TPM= 6.28 Transcript Type= NA
chr2	88857166	89320128	88857166	89320128	-	transcript4152.chr2.nnic@IGKV1-39	transcript4152.chr2.nnic	IG_V_gene	89320045,89319687,89213417,88861525,88857166	89320128,89319920,89213484,88861556,88857683	Gene ID= ENSG00000242371.1 TPM= 4.72 Transcript Type= NA
chr2	88857166	89320128	88857166	89320128	-	transcript4232.chr2.nnic@IGKV1-39	transcript4232.chr2.nnic	IG_V_gene	89320045,89319625,88861221,88857166	89320128,89319920,88861257,88857683	Gene ID= ENSG00000242371.1 TPM= 4.76 Transcript Type= NA
chr2	88857166	89320128	88857166	89320128	-	transcript4269.chr2.nnic@IGKV1-39	transcript4269.chr2.nnic	IG_V_gene	89320045,89319619,88861525,88857166	89320128,89319920,88861556,88857683	Gene ID= ENSG00000242371.1 TPM= 8.22 Transcript Type= NA
chr2	88857166	89320128	88857166	89320128	-	transcript4295.chr2.nnic@IGKV1-39	transcript4295.chr2.nnic	IG_V_gene	89320045,89319626,88861886,88857166	89320128,89319920,88861923,88857683	Gene ID= ENSG00000242371.1 TPM= 5.84 Transcript Type= NA
chr2	89542842	89585615	89542842	89585615	-	ENST00000636531.1@AC006453.2	ENST00000636531.1	lincRNA	89585550,89581006,89542842	89585615,89581140,89543836	Gene ID= ENSG00000283196.1 TPM= 1.17 Transcript Type= lincRNA
chr2	89562335	89585608	89562335	89585608	-	ENST00000636560.1@AC006453.2	ENST00000636560.1	lincRNA	89585550,89581006,89580558,89562335	89585608,89581140,89580635,89562684	Gene ID= ENSG00000283196.1 TPM= 5.84 Transcript Type= lincRNA
chr2	89579094	89580279	89579094	89580279	+	transcript4334.chr2.nnic@NA	transcript4334.chr2.nnic	NA	89579094	89580279	Gene ID= novel_gene_chr2_4335 TPM= 2.34 Transcript Type= NA
chr2	91571430	91580863	91571430	91580863	+	transcript4341.chr2.nnic@AC233266.2	transcript4341.chr2.nnic	lincRNA	91571430,91578477,91579333	91571644,91578585,91580863	Gene ID= ENSG00000261600.1 TPM= 2.34 Transcript Type= NA
chr2	95025684	95053996	95025684	95053996	+	ENST00000309988.8@MAL	ENST00000309988.8	protein_coding	95025684,95047959,95049581,95053381	95025885,95048126,95049706,95053996	Gene ID= ENSG00000172005.10 TPM= 22.18 Transcript Type= protein_coding
chr2	95087207	95122015	95087207	95122015	-	transcript4350.chr2.nnic@MRPS5	transcript4350.chr2.nnic	protein_coding	95121734,95117865,95115066,95109916,95108254,95106423,95104640,95101677,95100837,95100474,95090386,95087207	95122015,95117945,95115203,95110041,95108408,95106457,95104730,95101723,95100894,95100536,95090522,95087581	Gene ID= ENSG00000144029.11 TPM= 2.72 Transcript Type= NA
chr2	95087207	95122015	95087207	95122015	-	transcript4353.chr2.nic@MRPS5	transcript4353.chr2.nic	protein_coding	95121734,95117865,95115066,95109916,95108175,95106423,95101677,95100837,95100474,95090386,95087207	95122015,95117945,95115203,95110041,95108408,95106457,95104730,95100894,95100536,95090522,95087581	Gene ID= ENSG00000144029.11 TPM= 18.1 Transcript Type= NA
chr2	95087207	95122000	95087207	95122000	-	ENST00000272418.6@MRPS5	ENST00000272418.6	protein_coding	95121734,95117865,95115066,95109916,95108175,95106423,95104640,95101677,95100837,95100474,95090386,95087207	95122000,95117945,95115203,95110041,95108408,95106457,95104730,95101723,95100894,95100536,95090522,95087581	Gene ID= ENSG00000144029.11 TPM= 73.36 Transcript Type= protein_coding
chr2	95087208	95121799	95087208	95121799	-	ENST00000345084.9@MRPS5	ENST00000345084.9	protein_coding	95121734,95117865,95115066,95109916,95108175,95106423,95101677,95100837,95100474,95090386,95087208	95121799,95117945,95115203,95110041,95108408,95106457,95101723,95100894,95100536,95090522,95087581	Gene ID= ENSG00000144029.11 TPM= 3.89 Transcript Type= nonsense_mediated_decay
chr2	95147330	95155691	95147330	95155691	-	ENST00000496060.1@ZNF514	ENST00000496060.1	protein_coding	95153133,95152674,95147330	95155691,95152769,95150267	Gene ID= ENSG00000144026.11 TPM= 3.5 Transcript Type= retained_intron
chr2	95165432	95184317	95165432	95184317	+	ENST00000617923.4@ZNF2	ENST00000617923.4	protein_coding	95165432,95177483,95180159,95181103	95165860,95177609,95180272,95184317	Gene ID= ENSG00000275111.4 TPM= 1.17 Transcript Type= protein_coding
chr2	95165438	95182967	95165438	95182967	+	ENST00000614034.4@ZNF2	ENST00000614034.4	protein_coding	95165438,95176188,95177483,95180159,95181103	95165860,95176259,95177609,95180272,95182967	Gene ID= ENSG00000275111.4 TPM= 1.17 Transcript Type= protein_coding
chr2	95274453	95291308	95274453	95291308	+	ENST00000317668.8@PROM2	ENST00000317668.8	protein_coding	95274453,95275461,95275930,95276227,95276594,95276972,95277364,95277930,95278721,95278985,95279845,95281242,95281925,95282142,95284969,95285639,95286479,95286804,95287133,95287396,95288211,95288483,95288933,95290133	95274829,95275510,95276132,95276347,95276657,95277061,95277566,95278004,95278784,95279144,95279997,95281365,95282016,95282226,95285115,95285710,95286571,95286857,95287213,95287464,95288300,95288589,95289006,95291308	Gene ID= ENSG00000155066.15 TPM= 1.17 Transcript Type= protein_coding
chr2	95274453	95291306	95274453	95291306	+	ENST00000403131.6@PROM2	ENST00000403131.6	protein_coding	95274453,95275461,95275930,95276227,95276594,95276972,95277364,95277930,95278721,95278985,95279845,95281242,95281925,95282142,95284969,95285639,95286479,95286804,95287133,95287396,95288211,95288483,95288933,95291033	95274829,95275510,95276132,95276347,95276657,95277061,95277566,95278004,95278784,95279144,95279997,95281365,95282016,95282226,95285115,95285710,95286571,95286857,95287213,95287464,95288300,95288589,95289006,95291306	Gene ID= ENSG00000155066.15 TPM= 2.34 Transcript Type= protein_coding
chr2	95402698	95413096	95402698	95413096	+	transcript4367.chr2.nic@FAHD2A	transcript4367.chr2.nic	protein_coding	95402698,95405277,95405553,95406941,95410527,95412434,95412677,95412895	95402872,95405402,95405803,95407157,95411026,95412542,95412764,95413096	Gene ID= ENSG00000115042.9 TPM= 2.34 Transcript Type= NA
chr2	95402704	95413096	95402704	95413096	+	transcript4368.chr2.nic@FAHD2A	transcript4368.chr2.nic	protein_coding	95402704,95405553,95406941,95410527,95410864,95412434,95412677,95412895	95402992,95405803,95407157,95410586,95411026,95412542,95412764,95413096	Gene ID= ENSG00000115042.9 TPM= 8.17 Transcript Type= NA
chr2	95402708	95413096	95402708	95413096	+	transcript4375.chr2.nnic@FAHD2A	transcript4375.chr2.nnic	protein_coding	95402708,95406941,95410527,95412434,95412677,95412895	95405803,95407157,95410586,95412542,95412764,95413096	Gene ID= ENSG00000115042.9 TPM= 2.34 Transcript Type= NA
chr2	95402723	95413096	95402723	95413096	+	ENST00000447036.5@FAHD2A	ENST00000447036.5	protein_coding	95402723,95405277,95405553,95406941,95410527,95410864,95412434,95412677,95412895	95402872,95405402,95405803,95407157,95410586,95411026,95412542,95412764,95413096	Gene ID= ENSG00000115042.9 TPM= 17.51 Transcript Type= protein_coding
chr2	95523048	95526741	95523048	95526741	-	transcript4391.chr2.nnic@NA	transcript4391.chr2.nnic	NA	95523048	95526741	Gene ID= novel_gene_chr2_4392 TPM= 5.84 Transcript Type= NA
chr2	95525568	95527962	95525568	95527962	+	transcript4383.chr2.nnic@NA	transcript4383.chr2.nnic	NA	95525568	95527962	Gene ID= novel_gene_chr2_4384 TPM= 5.84 Transcript Type= NA
chr2	95525971	95532631	95525971	95532631	+	transcript4387.chr2.nnic@NA	transcript4387.chr2.nnic	NA	95525971	95532631	Gene ID= novel_gene_chr2_4388 TPM= 3.5 Transcript Type= NA
chr2	95665986	95668724	95665986	95668724	+	transcript4395.chr2.nnic@AC008268.1	transcript4395.chr2.nnic	lincRNA	95665986,95667917	95666424,95668724	Gene ID= ENSG00000235584.2 TPM= 16.93 Transcript Type= NA
chr2	95666084	95668715	95666084	95668715	+	ENST00000425887.2@AC008268.1	ENST00000425887.2	lincRNA	95666084,95667917	95666403,95668715	Gene ID= ENSG00000235584.2 TPM= 5.25 Transcript Type= lincRNA
chr2	95666084	95668723	95666084	95668723	+	transcript4397.chr2.nnic@NA	transcript4397.chr2.nnic	NA	95666084	95668723	Gene ID= novel_gene_chr2_4398 TPM= 5.84 Transcript Type= NA
chr2	96012442	96015235	96012442	96015235	-	transcript4418.chr2.nnic@NA	transcript4418.chr2.nnic	NA	96012442	96015235	Gene ID= novel_gene_chr2_4419 TPM= 9.34 Transcript Type= NA
chr2	96021946	96034934	96021946	96034934	-	transcript4403.chr2.nic@GPAT2	transcript4403.chr2.nic	protein_coding	96034817,96032297,96032033,96031261,96030744,96030406,96027991,96027419,96027007,96026697,96026183,96025930,96025485,96024773,96024427,96024189,96023923,96023309,96023106,96022958,96022668,96021946	96034934,96032419,96032146,96031334,96030848,96030534,96028090,96027552,96027106,96026909,96026305,96026012,96025603,96024843,96024685,96024337,96024000,96023440,96023226,96023023,96022723,96022275	Gene ID= ENSG00000186281.12 TPM= 3.3 Transcript Type= NA
chr2	96021946	96034973	96021946	96034973	-	transcript4404.chr2.nic@GPAT2	transcript4404.chr2.nic	protein_coding	96034853,96032297,96032033,96031261,96030744,96030406,96027991,96027419,96027007,96026697,96026183,96025930,96025485,96024773,96024427,96024189,96023923,96023309,96023106,96022958,96022668,96021946	96034973,96032419,96032146,96031334,96030848,96030534,96028090,96027552,96027106,96026909,96026305,96026012,96025603,96024843,96024685,96024337,96024000,96023440,96023226,96023023,96022723,96022275	Gene ID= ENSG00000186281.12 TPM= 3.3 Transcript Type= NA
chr2	96021946	96034916	96021946	96034916	-	ENST00000359548.8@GPAT2	ENST00000359548.8	protein_coding	96034817,96032297,96032033,96031261,96030744,96030406,96027991,96027419,96027007,96026697,96026183,96025930,96025485,96024773,96024427,96024189,96023923,96023309,96023106,96022958,96022668,96021946	96034916,96032419,96032146,96031334,96030848,96030534,96028090,96027552,96027106,96026909,96026305,96026012,96025603,96024843,96024667,96024337,96024000,96023440,96023226,96023023,96022723,96022275	Gene ID= ENSG00000186281.12 TPM= 2.72 Transcript Type= protein_coding
chr2	96143166	96145440	96143166	96145440	-	ENST00000288943.4@DUSP2	ENST00000288943.4	protein_coding	96144967,96144761,96144154,96143166	96145440,96144882,96144373,96144037	Gene ID= ENSG00000158050.4 TPM= 11.68 Transcript Type= protein_coding
chr2	96143166	96145441	96143166	96145441	-	transcript4422.chr2.nnic@NA	transcript4422.chr2.nnic	NA	96143166	96145441	Gene ID= novel_gene_chr2_4423 TPM= 2.34 Transcript Type= NA
chr2	96184859	96208818	96184859	96208818	-	ENST00000337288.9@STARD7	ENST00000337288.9	protein_coding	96208145,96195341,96194958,96193242,96193078,96192369,96187217,96184859	96208818,96195549,96195007,96193352,96193160,96192468,96187301,96186914	Gene ID= ENSG00000084090.13 TPM= 813.53 Transcript Type= protein_coding
chr2	96203656	96206822	96203656	96206822	+	transcript4446.chr2.nnic@NA	transcript4446.chr2.nnic	NA	96203656	96206822	Gene ID= novel_gene_chr2_4447 TPM= 16.35 Transcript Type= NA
chr2	96215212	96215499	96215212	96215499	-	transcript4448.chr2.nnic@NA	transcript4448.chr2.nnic	NA	96215212	96215499	Gene ID= novel_gene_chr2_4449 TPM= 2.34 Transcript Type= NA
chr2	96248516	96265994	96248516	96265994	-	ENST00000258439.7@TMEM127	ENST00000258439.7	protein_coding	96265869,96265138,96254833,96248516	96265994,96265512,96254997,96254115	Gene ID= ENSG00000135956.8 TPM= 8.76 Transcript Type= protein_coding
chr2	96251660	96265994	96251660	96265994	-	ENST00000432959.1@TMEM127	ENST00000432959.1	protein_coding	96265869,96265138,96254833,96251660	96265994,96265489,96254997,96254115	Gene ID= ENSG00000135956.8 TPM= 102.16 Transcript Type= protein_coding
chr2	96266226	96273686	96266226	96273686	+	transcript4470.chr2.nic@CIAO1	transcript4470.chr2.nic	protein_coding	96266226,96267321,96267625,96267836,96268457,96271111	96266489,96267469,96267736,96267924,96269355,96273686	Gene ID= ENSG00000144021.2 TPM= 7.79 Transcript Type= NA
chr2	96266225	96273686	96266225	96273686	+	transcript4474.chr2.nic@CIAO1	transcript4474.chr2.nic	protein_coding	96266225,96267321,96267625,96268457,96271111	96266489,96267469,96267924,96269355,96273686	Gene ID= ENSG00000144021.2 TPM= 7.79 Transcript Type= NA
chr2	96284744	96305571	96284744	96305571	-	transcript4453.chr2.nic@SNRNP200	transcript4453.chr2.nic	protein_coding	96305393,96304705,96303159,96301524,96300998,96299329,96298815,96298603,96298284,96297637,96297363,96296933,96296536,96295488,96293316,96292972,96291751,96291392,96290684,96290326,96289799,96289227,96289037,96288663,96287863,96287439,96287006,96286688,96286311,96284744	96305571,96304868,96303330,96301716,96301053,96299427,96298967,96298702,96298420,96297720,96297536,96297070,96296691,96295658,96293509,96293095,96291900,96291502,96290815,96290514,96289996,96289379,96289117,96288746,96287969,96287557,96287160,96286877,96286484,96285340	Gene ID= ENSG00000144028.14 TPM= 9.34 Transcript Type= NA
chr2	96274336	96305515	96274336	96305515	-	ENST00000323853.9@SNRNP200	ENST00000323853.9	protein_coding	96305393,96304705,96303159,96301524,96300998,96299329,96298815,96298603,96298284,96297637,96297363,96296933,96296536,96295488,96293316,96292972,96291751,96291392,96290684,96290326,96289799,96289227,96289037,96288663,96287863,96287439,96287006,96286688,96286311,96285180,96284358,96283813,96283535,96283201,96281814,96279451,96278809,96278547,96278237,96277807,96277539,96277081,96276904,96275257,96274336	96305515,96304868,96303330,96301716,96301053,96299427,96298967,96298702,96298420,96297720,96297536,96297070,96296691,96295658,96293509,96293095,96291900,96291502,96290815,96290514,96289996,96289379,96289117,96288746,96287969,96287557,96287160,96286877,96286484,96285340,96284585,96284004,96283713,96283352,96281922,96279559,96278998,96278711,96278358,96277950,96277715,96277241,96276985,96275349,96275155	Gene ID= ENSG00000144028.14 TPM= 31.53 Transcript Type= protein_coding
chr2	96335787	96373845	96335787	96373845	+	ENST00000240423.8@NCAPH	ENST00000240423.8	protein_coding	96335787,96341642,96342050,96342756,96343166,96344105,96351831,96353306,96354183,96359045,96360143,96360588,96364481,96365876,96367257,96368972,96369425,96373292	96335848,96341894,96342140,96342848,96343304,96344229,96352020,96353397,96354388,96359193,96360249,96360710,96364591,96366058,96367373,96369063,96369500,96373845	Gene ID= ENSG00000121152.9 TPM= 1.17 Transcript Type= protein_coding
chr2	96536700	96552630	96536700	96552630	+	transcript4508.chr2.nnic@ARID5A	transcript4508.chr2.nnic	protein_coding	96536700,96547402,96549321,96549753,96550029,96550574,96551099	96536830,96547517,96549459,96549805,96550285,96550733,96552630	Gene ID= ENSG00000196843.15 TPM= 4.44 Transcript Type= NA
chr2	96536700	96552630	96536700	96552630	+	transcript4512.chr2.nic@ARID5A	transcript4512.chr2.nic	protein_coding	96536700,96547402,96549321,96549753,96550574,96551099	96536830,96547517,96549459,96550285,96550733,96552630	Gene ID= ENSG00000196843.15 TPM= 14.95 Transcript Type= NA
chr2	96536700	96552630	96536700	96552630	+	transcript4513.chr2.nnic@ARID5A	transcript4513.chr2.nnic	protein_coding	96536700,96547402,96549753,96550029,96550574,96551099	96536830,96547517,96549805,96550285,96550733,96552630	Gene ID= ENSG00000196843.15 TPM= 4.44 Transcript Type= NA
chr2	96536749	96552638	96536749	96552638	+	ENST00000357485.7@ARID5A	ENST00000357485.7	protein_coding	96536749,96547402,96549321,96549753,96550188,96550574,96551099	96536830,96547517,96549459,96549805,96550285,96550733,96552638	Gene ID= ENSG00000196843.15 TPM= 56.98 Transcript Type= protein_coding
chr2	96536752	96552630	96536752	96552630	+	ENST00000412735.5@ARID5A	ENST00000412735.5	protein_coding	96536752,96547402,96549753,96550188,96550574,96551099	96536830,96547517,96549805,96550285,96550733,96552630	Gene ID= ENSG00000196843.15 TPM= 24.29 Transcript Type= nonsense_mediated_decay
chr2	96593172	96638366	96593172	96638366	-	transcript4525.chr2.nic@KANSL3	transcript4525.chr2.nic	protein_coding	96638283,96636921,96631312,96619672,96619359,96613488,96612818,96612462,96612282,96611064,96610726,96609499,96608864,96608508,96605320,96604779,96604250,96602753,96601643,96593172	96638366,96637185,96631482,96619762,96619544,96613619,96612934,96612563,96612353,96611138,96610883,96609562,96609064,96608664,96605511,96604863,96604380,96602862,96601776,96595631	Gene ID= ENSG00000114982.17 TPM= 8.56 Transcript Type= NA
chr2	96604961	96609980	96604961	96609980	-	transcript4527.chr2.nic@KANSL3	transcript4527.chr2.nic	protein_coding	96609499,96608864,96604961	96609980,96609064,96608664	Gene ID= ENSG00000114982.17 TPM= 3.5 Transcript Type= NA
chr2	96593170	96638346	96593170	96638346	-	ENST00000354204.10@KANSL3	ENST00000354204.10	protein_coding	96638283,96636921,96631312,96619672,96619359,96613488,96612818,96612462,96612282,96611064,96610726,96609499,96608864,96608508,96605320,96604779,96604250,96602753,96602116,96601643,96593170	96638346,96637185,96631543,96619762,96619544,96613619,96612934,96612563,96612353,96611138,96610883,96609562,96609064,96608664,96605511,96604863,96604380,96602862,96602338,96601776,96595631	Gene ID= ENSG00000114982.17 TPM= 17.9 Transcript Type= nonsense_mediated_decay
chr2	96593172	96638309	96593172	96638309	-	ENST00000431828.5@KANSL3	ENST00000431828.5	protein_coding	96638283,96636921,96631312,96619672,96619359,96613488,96612818,96612462,96612282,96611064,96610726,96609499,96608864,96608508,96605320,96604779,96604250,96602753,96602116,96601643,96593172	96638309,96637185,96631482,96619762,96619544,96613619,96612934,96612563,96612353,96611138,96610883,96609562,96609064,96608664,96605511,96604863,96604380,96602862,96602338,96601776,96595631	Gene ID= ENSG00000114982.17 TPM= 22.57 Transcript Type= protein_coding
chr2	96631282	96633581	96631282	96633581	+	transcript4529.chr2.nnic@NA	transcript4529.chr2.nnic	NA	96631282	96633581	Gene ID= novel_gene_chr2_4530 TPM= 5.84 Transcript Type= NA
chr2	96631512	96636005	96631512	96636005	+	transcript4531.chr2.nnic@NA	transcript4531.chr2.nnic	NA	96631512	96636005	Gene ID= novel_gene_chr2_4532 TPM= 7.01 Transcript Type= NA
chr2	96705929	96740063	96705929	96740063	-	ENST00000264963.8@LMAN2L	ENST00000264963.8	protein_coding	96739854,96737949,96734409,96733519,96711864,96711656,96707714,96705929	96740063,96738067,96734526,96733601,96712025,96711770,96707833,96707398	Gene ID= ENSG00000114988.11 TPM= 57.21 Transcript Type= protein_coding
chr2	96705975	96740041	96705975	96740041	-	ENST00000434524.5@LMAN2L	ENST00000434524.5	protein_coding	96739854,96737949,96737137,96734409,96733519,96711864,96711656,96707714,96705975	96740041,96738067,96737217,96734526,96733601,96712025,96711770,96707833,96707398	Gene ID= ENSG00000114988.11 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr2	96760902	96811891	96760902	96811891	+	ENST00000377075.2@CNNM4	ENST00000377075.2	protein_coding	96760902,96797012,96797513,96799057,96799552,96808561,96809320	96762401,96797155,96797647,96799226,96799648,96808742,96811891	Gene ID= ENSG00000158158.11 TPM= 18.68 Transcript Type= protein_coding
chr2	96815229	96816498	96815229	96816498	-	transcript4579.chr2.nnic@NA	transcript4579.chr2.nnic	NA	96815229	96816498	Gene ID= novel_gene_chr2_4580 TPM= 10.51 Transcript Type= NA
chr2	96816234	96833577	96816234	96833577	+	transcript4557.chr2.nnic@CNNM3	transcript4557.chr2.nnic	protein_coding	96816234,96825058,96826833,96827731,96828099,96828567,96828996,96832552	96817502,96825201,96826909,96827900,96828195,96828700,96829134,96833577	Gene ID= ENSG00000168763.15 TPM= 4.9 Transcript Type= NA
chr2	96816234	96837466	96816234	96837466	+	transcript4563.chr2.nnic@CNNM3	transcript4563.chr2.nnic	protein_coding	96816234,96825058,96826833,96827731,96828099,96828567,96828996,96836944	96817502,96825201,96826982,96827900,96828195,96828700,96829134,96837466	Gene ID= ENSG00000168763.15 TPM= 7.01 Transcript Type= NA
chr2	96816234	96835194	96816234	96835194	+	transcript4565.chr2.nnic@CNNM3	transcript4565.chr2.nnic	protein_coding	96816234,96825058,96826833,96827731,96828099,96828996,96832552	96817502,96825201,96826982,96827900,96828195,96829134,96835194	Gene ID= ENSG00000168763.15 TPM= 9.73 Transcript Type= NA
chr2	96816234	96833577	96816234	96833577	+	transcript4568.chr2.nnic@CNNM3	transcript4568.chr2.nnic	protein_coding	96816234,96825058,96827731,96828099,96828567,96828996,96832552	96817502,96825201,96827900,96828195,96828700,96829134,96833577	Gene ID= ENSG00000168763.15 TPM= 4.9 Transcript Type= NA
chr2	96816245	96833911	96816245	96833911	+	ENST00000377060.7@CNNM3	ENST00000377060.7	protein_coding	96816245,96826833,96827731,96828099,96828567,96828996,96832552	96817502,96826982,96827900,96828195,96828700,96829134,96833911	Gene ID= ENSG00000168763.15 TPM= 1.79 Transcript Type= protein_coding
chr2	96816250	96833911	96816250	96833911	+	ENST00000305510.3@CNNM3	ENST00000305510.3	protein_coding	96816250,96825058,96826833,96827731,96828099,96828567,96828996,96832552	96817502,96825201,96826982,96827900,96828195,96828700,96829134,96833911	Gene ID= ENSG00000168763.15 TPM= 16.97 Transcript Type= protein_coding
chr2	96818385	96822245	96818385	96822245	-	transcript4581.chr2.nnic@NA	transcript4581.chr2.nnic	NA	96818385	96822245	Gene ID= novel_gene_chr2_4582 TPM= 3.5 Transcript Type= NA
chr2	96827267	96828175	96827267	96828175	-	transcript4583.chr2.nnic@NA	transcript4583.chr2.nnic	NA	96827267	96828175	Gene ID= novel_gene_chr2_4584 TPM= 3.5 Transcript Type= NA
chr2	96847985	96858095	96847985	96858095	-	ENST00000393537.4@ANKRD39	ENST00000393537.4	protein_coding	96857888,96854338,96853401,96847985	96858095,96854441,96853604,96848444	Gene ID= ENSG00000213337.8 TPM= 9.34 Transcript Type= protein_coding
chr2	96852951	96856487	96852951	96856487	+	transcript4574.chr2.nnic@NA	transcript4574.chr2.nnic	NA	96852951,96854922,96855477,96856294	96853878,96855422,96855541,96856487	Gene ID= novel_gene_chr2_4575 TPM= 2.34 Transcript Type= NA
chr2	96859742	96868581	96859742	96868581	-	transcript4587.chr2.nic@SEMA4C	transcript4587.chr2.nic	protein_coding	96868416,96867778,96866283,96865867,96865666,96865441,96865204,96864964,96864705,96864238,96863926,96863682,96861737,96861579,96859742	96868581,96867926,96866431,96865929,96865764,96865537,96865320,96865115,96864880,96864382,96864148,96863794,96861894,96861649,96861455	Gene ID= ENSG00000168758.10 TPM= 15.76 Transcript Type= NA
chr2	96859742	96869471	96859742	96869471	-	transcript4588.chr2.nnic@SEMA4C	transcript4588.chr2.nnic	protein_coding	96869187,96867778,96866283,96865867,96865666,96865441,96865204,96864964,96864705,96864238,96863926,96863682,96861737,96861579,96859742	96869471,96867926,96866431,96865929,96865764,96865537,96865320,96865115,96864880,96864382,96864148,96863794,96861894,96861649,96861455	Gene ID= ENSG00000168758.10 TPM= 20.43 Transcript Type= NA
chr2	96859716	96869971	96859716	96869971	-	ENST00000305476.9@SEMA4C	ENST00000305476.9	protein_coding	96869876,96867778,96866283,96865867,96865666,96865441,96865204,96864964,96864705,96864238,96863926,96863682,96861737,96861579,96859716	96869971,96867923,96866431,96865929,96865764,96865537,96865320,96865115,96864880,96864382,96864148,96863794,96861894,96861649,96861455	Gene ID= ENSG00000168758.10 TPM= 17.51 Transcript Type= protein_coding
chr2	97083583	97094882	97083583	97094882	-	ENST00000272610.3@FAHD2B	ENST00000272610.3	protein_coding	97094701,97091462,97090109,97086139,97085699,97084169,97083948,97083583	97094882,97091712,97090325,97086198,97085861,97084277,97084035,97083817	Gene ID= ENSG00000144199.11 TPM= 7.59 Transcript Type= protein_coding
chr2	97083583	97094839	97083583	97094839	-	ENST00000414820.5@FAHD2B	ENST00000414820.5	protein_coding	97094701,97091863,97091462,97090109,97086139,97085699,97084169,97083948,97083583	97094839,97091988,97091712,97090325,97086198,97085861,97084277,97084035,97083817	Gene ID= ENSG00000144199.11 TPM= 8.76 Transcript Type= protein_coding
chr2	97284433	97291780	97284433	97291780	+	ENST00000618066.1@AC159540.2	ENST00000618066.1	lincRNA	97284433,97284878,97291540	97284785,97285007,97291780	Gene ID= ENSG00000277701.4 TPM= 2.34 Transcript Type= lincRNA
chr2	97646040	97648383	97646040	97648383	+	ENST00000258424.2@COX5B	ENST00000258424.2	protein_coding	97646040,97647067,97647344,97647996	97646189,97647140,97647443,97648383	Gene ID= ENSG00000135940.6 TPM= 2.34 Transcript Type= protein_coding
chr2	97655963	97664107	97655963	97664107	-	ENST00000289228.6@ACTR1B	ENST00000289228.6	protein_coding	97663843,97661882,97660571,97659352,97658879,97658427,97658224,97657943,97657448,97657152,97655963	97664107,97661946,97660646,97659477,97659003,97658643,97658316,97658117,97657509,97657192,97656960	Gene ID= ENSG00000115073.7 TPM= 53.32 Transcript Type= protein_coding
chr2	97655963	97664008	97655963	97664008	-	transcript4633.chr2.nic@ACTR1B	transcript4633.chr2.nic	protein_coding	97663843,97661882,97660571,97659352,97658427,97658224,97657943,97657448,97657152,97655963	97664008,97661946,97660646,97659477,97659003,97658316,97658117,97657509,97657192,97656960	Gene ID= ENSG00000115073.7 TPM= 12.46 Transcript Type= NA
chr2	97655963	97664008	97655963	97664008	-	transcript4634.chr2.nic@ACTR1B	transcript4634.chr2.nic	protein_coding	97663843,97661882,97660571,97659352,97658427,97657943,97657448,97657152,97655963	97664008,97661946,97660646,97659477,97659003,97658316,97657509,97657192,97656960	Gene ID= ENSG00000115073.7 TPM= 8.96 Transcript Type= NA
chr2	97669746	97703056	97669746	97703056	+	ENST00000451384.6@LINC01125	ENST00000451384.6	protein_coding	97669746,97671331,97674456,97675631,97675845,97688895,97690256,97699026,97701154,97702669	97669834,97671499,97674557,97675721,97675928,97688993,97690327,97699136,97701304,97703056	Gene ID= ENSG00000228486.10 TPM= 1.17 Transcript Type= processed_transcript
chr2	97713552	97739860	97713552	97739860	+	transcript4646.chr2.nic@ZAP70	transcript4646.chr2.nic	protein_coding	97713552,97713916,97724016,97725092,97732883,97733125,97733297,97734520,97737473,97737757,97737995,97739375	97713674,97713994,97724438,97725252,97733021,97733212,97733595,97735456,97737665,97737897,97738107,97739860	Gene ID= ENSG00000115085.13 TPM= 8.17 Transcript Type= NA
chr2	97713552	97739860	97713552	97739860	+	transcript4650.chr2.nic@ZAP70	transcript4650.chr2.nic	protein_coding	97713552,97713916,97724016,97725092,97732883,97733125,97733297,97737473,97737757,97737995,97739375	97713674,97713994,97724438,97725252,97733021,97733212,97735456,97737665,97737897,97738107,97739860	Gene ID= ENSG00000115085.13 TPM= 5.84 Transcript Type= NA
chr2	97756333	97765317	97756333	97765317	-	ENST00000485245.2@TMEM131	ENST00000485245.2	protein_coding	97758893,97756333	97765317,97757383	Gene ID= ENSG00000075568.16 TPM= 2.34 Transcript Type= retained_intron
chr2	97756340	97995891	97756340	97995891	-	ENST00000186436.9@TMEM131	ENST00000186436.9	protein_coding	97995476,97927426,97908658,97888052,97859304,97844145,97841815,97837077,97834775,97834621,97833365,97818613,97815199,97814235,97813971,97812639,97812421,97811128,97809688,97805551,97805376,97805088,97802652,97802428,97801895,97797365,97796844,97796218,97794930,97793395,97792386,97775843,97772297,97766478,97766114,97762035,97760793,97760593,97759652,97758893,97756340	97995891,97927487,97908698,97888120,97859427,97844261,97841937,97837157,97834925,97834677,97833426,97818721,97815307,97814388,97814141,97812749,97812555,97811232,97809774,97805703,97805451,97805205,97802790,97802537,97801961,97797516,97796986,97796404,97795115,97793553,97792984,97776018,97772424,97766602,97766263,97762200,97760914,97760689,97759749,97759053,97757383	Gene ID= ENSG00000075568.16 TPM= 15.18 Transcript Type= protein_coding
chr2	97798931	97800606	97798931	97800606	+	transcript4659.chr2.nnic@NA	transcript4659.chr2.nnic	NA	97798931	97800606	Gene ID= novel_gene_chr2_4660 TPM= 4.67 Transcript Type= NA
chr2	97840501	97843080	97840501	97843080	+	transcript4661.chr2.nnic@NA	transcript4661.chr2.nnic	NA	97840501	97843080	Gene ID= novel_gene_chr2_4662 TPM= 2.34 Transcript Type= NA
chr2	98444832	98590148	98444832	98590148	+	transcript4669.chr2.nnic@INPP4A	transcript4669.chr2.nnic	protein_coding	98444832,98518964,98519946,98520687,98533377,98535729,98536129,98537863,98538891,98539528,98543877,98545969,98546586,98548952,98552786,98554271,98555553,98559463,98563465,98564640,98565640,98566029,98568571,98572815,98576989,98587476	98445085,98519025,98520154,98520731,98533495,98535845,98536208,98537974,98538981,98539675,98544007,98546073,98546694,98548969,98552969,98554489,98555808,98559495,98563637,98564763,98565766,98566169,98568668,98572927,98577143,98590148	Gene ID= ENSG00000040933.15 TPM= 14.01 Transcript Type= NA
chr2	98600473	98608509	98600473	98608509	-	transcript4688.chr2.nnic@COA5	transcript4688.chr2.nnic	protein_coding	98608197,98604108,98600473	98608509,98604191,98600793	Gene ID= ENSG00000183513.8 TPM= 2.34 Transcript Type= NA
chr2	98608571	98618515	98608571	98618515	+	transcript4699.chr2.nnic@UNC50	transcript4699.chr2.nnic	protein_coding	98608571,98609643,98610775,98616207,98616432,98618168	98608726,98610039,98610895,98616346,98616533,98618515	Gene ID= ENSG00000115446.11 TPM= 9.54 Transcript Type= NA
chr2	98608579	98618515	98608579	98618515	+	ENST00000409975.5@UNC50	ENST00000409975.5	protein_coding	98608579,98610775,98616207,98616432,98618168	98610039,98610895,98616346,98616533,98618515	Gene ID= ENSG00000115446.11 TPM= 8.96 Transcript Type= protein_coding
chr2	98608579	98618515	98608579	98618515	+	ENST00000357765.6@UNC50	ENST00000357765.6	protein_coding	98608579,98609756,98610775,98616207,98616432,98618168	98608726,98610039,98610895,98616346,98616533,98618515	Gene ID= ENSG00000115446.11 TPM= 62.08 Transcript Type= protein_coding
chr2	98615196	98618512	98615196	98618512	+	transcript4711.chr2.nnic@NA	transcript4711.chr2.nnic	NA	98615196	98618512	Gene ID= novel_gene_chr2_4712 TPM= 2.34 Transcript Type= NA
chr2	98619106	98731126	98619106	98731126	-	ENST00000393487.5@MGAT4A	ENST00000393487.5	protein_coding	98731048,98726239,98678304,98675035,98663046,98658218,98656352,98655445,98645428,98643923,98640121,98639808,98636517,98635222,98625723,98619106	98731126,98726567,98678471,98675175,98663179,98658264,98656465,98655520,98645542,98644053,98640228,98640001,98636595,98635288,98625835,98625592	Gene ID= ENSG00000071073.12 TPM= 19.85 Transcript Type= protein_coding
chr2	98722535	98724800	98722535	98724800	+	transcript4732.chr2.nnic@NA	transcript4732.chr2.nnic	NA	98722535	98724800	Gene ID= novel_gene_chr2_4733 TPM= 2.34 Transcript Type= NA
chr2	98793846	98936259	98793846	98936259	-	ENST00000397899.6@KIAA1211L	ENST00000397899.6	protein_coding	98935938,98846731,98838119,98832862,98832348,98826975,98821857,98797350,98796120,98793846	98936259,98846810,98838287,98832997,98832512,98827169,98823537,98797537,98796264,98794671	Gene ID= ENSG00000196872.11 TPM= 214.84 Transcript Type= protein_coding
chr2	99141485	99151487	99141485	99151487	+	ENST00000302513.6@C2orf15	ENST00000302513.6	protein_coding	99141485,99142285,99147402,99150483	99141937,99142401,99147493,99151487	Gene ID= ENSG00000273045.5 TPM= 1.17 Transcript Type= protein_coding
chr2	99154955	99163148	99154955	99163148	+	ENST00000393471.2@LIPT1	ENST00000393471.2	protein_coding	99154955,99161957	99155051,99163148	Gene ID= ENSG00000144182.16 TPM= 4.67 Transcript Type= protein_coding
chr2	99169263	99181058	99169263	99181058	-	ENST00000289359.6@MITD1	ENST00000289359.6	protein_coding	99180831,99173915,99171510,99171343,99170537,99169550,99169263	99181058,99174016,99171646,99171429,99170652,99169610,99169470	Gene ID= ENSG00000158411.11 TPM= 7.01 Transcript Type= protein_coding
chr2	99169263	99181034	99169263	99181034	-	ENST00000413710.2@MITD1	ENST00000413710.2	protein_coding	99180831,99173915,99173414,99171510,99171343,99170537,99169263	99181034,99174016,99173502,99171646,99171429,99170652,99169610	Gene ID= ENSG00000158411.11 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr2	99181198	99197435	99181198	99197435	+	transcript4753.chr2.nnic@MRPL30	transcript4753.chr2.nnic	protein_coding	99181198,99186177,99188177,99194751,99195116,99195573,99196347	99181249,99186254,99188257,99194897,99195189,99196011,99197435	Gene ID= ENSG00000185414.19 TPM= 2.34 Transcript Type= NA
chr2	99181079	99197626	99181079	99197626	+	ENST00000338148.7@MRPL30	ENST00000338148.7	protein_coding	99181079,99186177,99188177,99194751,99195116,99195573	99181249,99186254,99188257,99194897,99195189,99197626	Gene ID= ENSG00000185414.19 TPM= 3.5 Transcript Type= protein_coding
chr2	99318982	99336462	99318982	99336462	-	ENST00000264255.7@TXNDC9	ENST00000264255.7	protein_coding	99336239,99333022,99327535,99321955,99318982	99336462,99333242,99327653,99322209,99319799	Gene ID= ENSG00000115514.11 TPM= 25.69 Transcript Type= protein_coding
chr2	99337353	99401326	99337353	99401326	+	ENST00000289371.10@EIF5B	ENST00000289371.10	protein_coding	99337353,99360236,99360465,99361148,99363645,99364271,99368493,99369392,99371656,99376347,99379019,99379318,99382159,99382780,99389718,99390219,99390544,99392967,99394267,99394509,99394719,99396760,99398748,99399307	99337589,99360361,99360549,99361820,99363862,99364421,99368591,99369481,99371730,99376636,99379126,99379428,99382226,99382921,99389849,99390401,99390705,99393098,99394398,99394585,99394883,99396898,99398909,99401326	Gene ID= ENSG00000158417.10 TPM= 7.01 Transcript Type= protein_coding
chr2	99400950	99490041	99400950	99490041	-	transcript4775.chr2.nic@REV1	transcript4775.chr2.nic	protein_coding	99489817,99464922,99462496,99451345,99449336,99442317,99438601,99435834,99434332,99429840,99424152,99421499,99418828,99412731,99410695,99408029,99406325,99405910,99404444,99403695,99402889,99402644,99402244,99400950	99490041,99464985,99462622,99451501,99449504,99442469,99439310,99435941,99434448,99429945,99424280,99421653,99418947,99412951,99410867,99408131,99406490,99406106,99404677,99403815,99403106,99402800,99402346,99401352	Gene ID= ENSG00000135945.9 TPM= 2.34 Transcript Type= NA
chr2	99403056	99490030	99403056	99490030	-	transcript4793.chr2.nic@REV1	transcript4793.chr2.nic	protein_coding	99489817,99464922,99462496,99449336,99442317,99438601,99435834,99434332,99429840,99424152,99421499,99418828,99412731,99410695,99408029,99406325,99405910,99404444,99403695,99403056	99490030,99464985,99462622,99449504,99442469,99439310,99435941,99434448,99429945,99424280,99421653,99418947,99412951,99410867,99408131,99406490,99406106,99404677,99403815,99403106	Gene ID= ENSG00000135945.9 TPM= 4.67 Transcript Type= NA
chr2	99438574	99490259	99438574	99490259	-	transcript4804.chr2.nic@REV1	transcript4804.chr2.nic	protein_coding	99489817,99464922,99462496,99449336,99442317,99438574	99490259,99464985,99462622,99449504,99442469,99439310	Gene ID= ENSG00000135945.9 TPM= 8.17 Transcript Type= NA
chr2	99400475	99490035	99400475	99490035	-	ENST00000258428.7@REV1	ENST00000258428.7	protein_coding	99489817,99464922,99462496,99449336,99442317,99438601,99435834,99434332,99429840,99424152,99421499,99418828,99412731,99410695,99408029,99406325,99405910,99404444,99403695,99402889,99402644,99402244,99400475	99490035,99464985,99462622,99449504,99442469,99439310,99435941,99434448,99429948,99424280,99421653,99418947,99412951,99410867,99408131,99406490,99406106,99404677,99403815,99403106,99402800,99402346,99401352	Gene ID= ENSG00000135945.9 TPM= 3.5 Transcript Type= protein_coding
chr2	100136280	100138959	100136280	100138959	+	transcript4825.chr2.nnic@NA	transcript4825.chr2.nnic	NA	100136280	100138959	Gene ID= novel_gene_chr2_4826 TPM= 2.34 Transcript Type= NA
chr2	100273291	100322733	100273291	100322733	-	ENST00000393437.7@LONRF2	ENST00000393437.7	protein_coding	100321415,100309107,100302921,100300644,100299717,100299226,100298836,100295432,100294229,100290258,100286914,100273291	100322733,100309225,100303043,100300787,100299918,100299319,100298950,100295553,100294387,100290420,100287063,100284492	Gene ID= ENSG00000170500.12 TPM= 4.67 Transcript Type= protein_coding
chr2	100391863	100417682	100391863	100417682	-	transcript4833.chr2.nnic@CHST10	transcript4833.chr2.nnic	protein_coding	100417374,100415041,100406576,100402564,100397908,100391863	100417682,100415111,100406707,100402655,100398142,100393782	Gene ID= ENSG00000115526.10 TPM= 2.34 Transcript Type= NA
chr2	100391860	100417656	100391860	100417656	-	ENST00000264249.7@CHST10	ENST00000264249.7	protein_coding	100417374,100415041,100406576,100402564,100397908,100395509,100391860	100417656,100415111,100406707,100402655,100398142,100395614,100393782	Gene ID= ENSG00000115526.10 TPM= 37.36 Transcript Type= protein_coding
chr2	100562690	100576735	100562690	100576735	+	ENST00000264254.10@PDCL3	ENST00000264254.10	protein_coding	100562690,100566503,100568931,100569578,100571590,100576354	100563073,100566629,100569021,100569721,100571798,100576735	Gene ID= ENSG00000115539.13 TPM= 42.03 Transcript Type= protein_coding
chr2	100820126	100996055	100820126	100996055	+	transcript4841.chr2.nic@NPAS2	transcript4841.chr2.nic	protein_coding	100820126,100904733,100925146,100932910,100937753,100948235,100949367,100964058,100964861,100965660,100968281,100970990,100974803,100975458,100977710,100982231,100988079,100990256,100990780,100993347,100995796	100820414,100904786,100925294,100933001,100937842,100948355,100949480,100964176,100964943,100965766,100968428,100971074,100974944,100975567,100977799,100982377,100988276,100990446,100990872,100993527,100996055	Gene ID= ENSG00000170485.16 TPM= 4.67 Transcript Type= NA
chr2	100988310	100996822	100988310	100996822	+	ENST00000495559.1@NPAS2	ENST00000495559.1	protein_coding	100988310,100990780,100993347,100995400	100990446,100990872,100993527,100996822	Gene ID= ENSG00000170485.16 TPM= 3.5 Transcript Type= retained_intron
chr2	101001715	101007267	101001715	101007267	+	ENST00000264258.7@RPL31	ENST00000264258.7	protein_coding	101001715,101002702,101004158,101005959,101006350	101002315,101002808,101004283,101006071,101007267	Gene ID= ENSG00000071082.10 TPM= 198.49 Transcript Type= protein_coding
chr2	101002283	101019728	101002283	101019728	+	ENST00000409028.8@RPL31	ENST00000409028.8	protein_coding	101002283,101002702,101004158,101005959,101018998	101002315,101002808,101004283,101006071,101019728	Gene ID= ENSG00000071082.10 TPM= 2.34 Transcript Type= protein_coding
chr2	101002293	101006418	101002293	101006418	+	ENST00000409320.7@RPL31	ENST00000409320.7	protein_coding	101002293,101002702,101004158,101005959	101002315,101002808,101004283,101006418	Gene ID= ENSG00000071082.10 TPM= 3.5 Transcript Type= protein_coding
chr2	101151660	101155412	101151660	101155412	+	ENST00000610202.2@TBC1D8-AS1	ENST00000610202.2	lincRNA	101151660,101154035	101152759,101155412	Gene ID= ENSG00000272902.2 TPM= 2.34 Transcript Type= lincRNA
chr2	101252802	101270316	101252802	101270316	+	ENST00000289382.7@CNOT11	ENST00000289382.7	protein_coding	101252802,101257791,101262539,101264845,101266677,101269040,101269216	101253478,101257955,101262691,101265047,101266879,101269136,101270316	Gene ID= ENSG00000158435.7 TPM= 81.73 Transcript Type= protein_coding
chr2	101252886	101270316	101252886	101270316	+	transcript4870.chr2.nnic@CNOT11	transcript4870.chr2.nnic	protein_coding	101252886,101257838,101262539,101264845,101266677,101269040,101269216	101253478,101257955,101262691,101265047,101266879,101269136,101270316	Gene ID= ENSG00000158435.7 TPM= 2.34 Transcript Type= NA
chr2	101252863	101270316	101252863	101270316	+	transcript4879.chr2.nic@CNOT11	transcript4879.chr2.nic	protein_coding	101252863,101257791,101262539,101264845,101266677,101269040	101253478,101257955,101262691,101265047,101266879,101270316	Gene ID= ENSG00000158435.7 TPM= 2.34 Transcript Type= NA
chr2	101253202	101257057	101253202	101257057	+	transcript4889.chr2.nnic@NA	transcript4889.chr2.nnic	NA	101253202	101257057	Gene ID= novel_gene_chr2_4890 TPM= 2.34 Transcript Type= NA
chr2	101288231	101308699	101288231	101308699	-	transcript4883.chr2.nic@RNF149	transcript4883.chr2.nic	protein_coding	101308129,101294931,101294014,101288231	101308699,101295181,101294082,101289055	Gene ID= ENSG00000163162.8 TPM= 11.68 Transcript Type= NA
chr2	101271222	101308701	101271222	101308701	-	ENST00000424632.5@RNF149	ENST00000424632.5	protein_coding	101308129,101294931,101294014,101288973,101286081,101281859,101273127,101271222	101308701,101295181,101294082,101289055,101286177,101282057,101273341,101271744	Gene ID= ENSG00000163162.8 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr2	101276091	101308696	101276091	101308696	-	ENST00000295317.3@RNF149	ENST00000295317.3	protein_coding	101308129,101294931,101294014,101288973,101286081,101281859,101276091	101308696,101295181,101294082,101289055,101286177,101282057,101277281	Gene ID= ENSG00000163162.8 TPM= 3.5 Transcript Type= protein_coding
chr2	101279188	101281036	101279188	101281036	+	transcript4891.chr2.nnic@NA	transcript4891.chr2.nnic	NA	101279188	101281036	Gene ID= novel_gene_chr2_4892 TPM= 3.5 Transcript Type= NA
chr2	101303283	101305124	101303283	101305124	-	transcript4893.chr2.nnic@NA	transcript4893.chr2.nnic	NA	101303283	101305124	Gene ID= novel_gene_chr2_4894 TPM= 2.34 Transcript Type= NA
chr2	101697565	101891496	101697565	101891496	+	transcript4905.chr2.nic@MAP4K4	transcript4905.chr2.nic	protein_coding	101697565,101698473,101790720,101823928,101825319,101829504,101831721,101834409,101835900,101839819,101842609,101844101,101855977,101858996,101859643,101864930,101866428,101867212,101869622,101870295,101871494,101873647,101874082,101877003,101882551,101885187,101887088,101887778,101888796,101891166	101698137,101698538,101790776,101824053,101825429,101829594,101831851,101834463,101835978,101839994,101842681,101844311,101856138,101859082,101859864,101865036,101866579,101867309,101869797,101870415,101871685,101873764,101874252,101877146,101882685,101885287,101887237,101887937,101888935,101891496	Gene ID= ENSG00000071054.16 TPM= 12.84 Transcript Type= NA
chr2	101697717	101891496	101697717	101891496	+	transcript4910.chr2.nic@MAP4K4	transcript4910.chr2.nic	protein_coding	101697717,101698473,101790720,101823928,101825319,101829504,101831721,101834409,101835900,101839819,101842609,101844101,101855977,101858996,101859736,101860825,101864930,101866428,101867212,101869622,101870295,101873647,101874082,101877003,101882551,101885187,101887088,101887778,101888796,101891166	101698137,101698538,101790776,101824053,101825429,101829594,101831851,101834463,101835978,101839994,101842681,101844311,101856138,101859082,101859864,101860986,101865036,101866579,101867309,101869797,101870415,101873764,101874252,101877146,101882685,101885287,101887237,101887937,101888935,101891496	Gene ID= ENSG00000071054.16 TPM= 3.5 Transcript Type= NA
chr2	101697479	101891496	101697479	101891496	+	transcript4913.chr2.nic@MAP4K4	transcript4913.chr2.nic	protein_coding	101697479,101698473,101790720,101823928,101825319,101829504,101831721,101834409,101835900,101839819,101842609,101844101,101855977,101858996,101859736,101864930,101866428,101867212,101869622,101870295,101871494,101873647,101874082,101877003,101882551,101885187,101887088,101887778,101888796,101891166	101698137,101698538,101790776,101824053,101825429,101829594,101831851,101834463,101835978,101839994,101842681,101844311,101856138,101859082,101859864,101865036,101866579,101867309,101869797,101870415,101871685,101873764,101874252,101877146,101882685,101885287,101887237,101887937,101888935,101891496	Gene ID= ENSG00000071054.16 TPM= 14.01 Transcript Type= NA
chr2	101697558	101891987	101697558	101891987	+	transcript4916.chr2.nic@MAP4K4	transcript4916.chr2.nic	protein_coding	101697558,101698473,101790720,101823928,101825319,101829504,101831721,101834409,101835900,101839819,101842609,101844101,101855977,101858996,101859643,101864930,101866428,101867212,101869622,101870295,101873647,101874082,101877003,101882551,101885187,101887088,101887778,101888796,101891166	101698137,101698538,101790776,101824053,101825429,101829594,101831851,101834463,101835978,101839994,101842681,101844311,101856138,101859082,101859864,101865036,101866579,101867309,101869797,101870415,101873764,101874252,101877146,101882685,101885287,101887237,101887937,101888935,101891987	Gene ID= ENSG00000071054.16 TPM= 3.89 Transcript Type= NA
chr2	101697717	101892800	101697717	101892800	+	transcript4927.chr2.nnic@MAP4K4	transcript4927.chr2.nnic	protein_coding	101697717,101698473,101790720,101823928,101825319,101829504,101831721,101834409,101835900,101839819,101842609,101844101,101855977,101858996,101859643,101864930,101866428,101867212,101869622,101870295,101873647,101874082,101877003,101882551,101891922	101698137,101698538,101790776,101824053,101825429,101829594,101831851,101834463,101835978,101839994,101842681,101844311,101856138,101859082,101859864,101865036,101866579,101867309,101869797,101870415,101873764,101874252,101877146,101882581,101892800	Gene ID= ENSG00000071054.16 TPM= 4.67 Transcript Type= NA
chr2	101837101	101841433	101837101	101841433	-	transcript4938.chr2.nnic@NA	transcript4938.chr2.nnic	NA	101837101	101841433	Gene ID= novel_gene_chr2_4939 TPM= 3.5 Transcript Type= NA
chr2	101962056	101987167	101962056	101987167	+	ENST00000627215.1@AC005035.1	ENST00000627215.1	lincRNA	101962056,101964700,101983692	101962168,101964837,101987167	Gene ID= ENSG00000281162.2 TPM= 1.17 Transcript Type= lincRNA
chr2	101991824	102028414	101991824	102028414	+	transcript4942.chr2.nnic@IL1R2	transcript4942.chr2.nnic	protein_coding	101991824,102008515,102009562,102015871,102019638,102022187,102024533,102026111,102028226	101991996,102008642,102009826,102016051,102019812,102022249,102024668,102026253,102028414	Gene ID= ENSG00000115590.13 TPM= 5.84 Transcript Type= NA
chr2	101991844	102028544	101991844	102028544	+	ENST00000332549.7@IL1R2	ENST00000332549.7	protein_coding	101991844,102008515,102009562,102015871,102019638,102022187,102024533,102026111,102028226	101992011,102008642,102009826,102016051,102019812,102022249,102024668,102026253,102028544	Gene ID= ENSG00000115590.13 TPM= 17.51 Transcript Type= protein_coding
chr2	102104572	102179874	102104572	102179874	+	transcript4959.chr2.nic@IL1R1	transcript4959.chr2.nic	protein_coding	102104572,102153941,102157719,102164774,102165115,102166113,102168598,102171801,102172687,102174587,102175478,102176353	102104872,102154017,102157785,102165008,102165304,102166281,102168663,102171918,102172838,102174730,102175645,102179874	Gene ID= ENSG00000115594.11 TPM= 11.68 Transcript Type= NA
chr2	102142633	102179874	102142633	102179874	+	transcript4966.chr2.nnic@IL1R1	transcript4966.chr2.nnic	protein_coding	102142633,102153941,102157719,102164709,102165115,102166113,102168598,102171801,102172687,102174587,102175478,102176353	102143020,102154017,102157785,102165008,102165304,102166281,102168663,102171918,102172838,102174730,102175645,102179874	Gene ID= ENSG00000115594.11 TPM= 14.01 Transcript Type= NA
chr2	102104569	102175817	102104569	102175817	+	ENST00000409329.5@IL1R1	ENST00000409329.5	protein_coding	102104569,102153941,102157719,102164774,102165115,102166113,102168598,102171801,102172687,102174587,102175478	102104872,102154017,102157785,102165008,102165304,102166281,102168663,102171918,102172838,102174730,102175817	Gene ID= ENSG00000115594.11 TPM= 1.17 Transcript Type= protein_coding
chr2	102142786	102179874	102142786	102179874	+	ENST00000410023.5@IL1R1	ENST00000410023.5	protein_coding	102142786,102153941,102157719,102164774,102165115,102166113,102168598,102171801,102172687,102174587,102175478,102176353	102143020,102154017,102157785,102165008,102165304,102166281,102168663,102171918,102172838,102174730,102175645,102179874	Gene ID= ENSG00000115594.11 TPM= 204.33 Transcript Type= protein_coding
chr2	102187024	102236618	102187024	102236618	+	transcript4987.chr2.nnic@IL1RL2	transcript4987.chr2.nnic	protein_coding	102187024,102187856,102189076,102201556,102212100,102218953,102219881,102225898,102232963,102234897	102187082,102187925,102189310,102201715,102212174,102219082,102220017,102226041,102233124,102236618	Gene ID= ENSG00000115598.9 TPM= 2.34 Transcript Type= NA
chr2	102337258	102344951	102337258	102344951	+	ENST00000409584.5@IL1RL1	ENST00000409584.5	protein_coding	102337258,102338116,102338837,102340098,102340666,102342223,102343078,102343270	102337337,102338325,102339047,102340272,102340828,102342294,102343177,102344951	Gene ID= ENSG00000115602.16 TPM= 3.5 Transcript Type= protein_coding
chr2	102355797	102398758	102355797	102398758	+	transcript5018.chr2.nnic@IL18R1	transcript5018.chr2.nnic	protein_coding	102355797,102362633,102371953,102375907,102381620,102384878,102386861,102390056,102394469,102396531	102356400,102362718,102372118,102376063,102381682,102384998,102387000,102390217,102394627,102398758	Gene ID= ENSG00000115604.10 TPM= 2.34 Transcript Type= NA
chr2	102355817	102390576	102355817	102390576	+	transcript5019.chr2.nic@IL18R1	transcript5019.chr2.nic	protein_coding	102355817,102356283,102362633,102367825,102371953,102375907,102381620,102384878,102386861,102390056	102356138,102356400,102362718,102368068,102372118,102376063,102381682,102384998,102387000,102390576	Gene ID= ENSG00000115604.10 TPM= 3.5 Transcript Type= NA
chr2	102355797	102390576	102355797	102390576	+	transcript5022.chr2.nic@IL18R1	transcript5022.chr2.nic	protein_coding	102355797,102362633,102367825,102371953,102375907,102381620,102384878,102386861,102390056	102356400,102362718,102368068,102372118,102376063,102381682,102384998,102387000,102390576	Gene ID= ENSG00000115604.10 TPM= 10.51 Transcript Type= NA
chr2	102355929	102398758	102355929	102398758	+	ENST00000409599.5@IL18R1	ENST00000409599.5	protein_coding	102355929,102356283,102362633,102367825,102371953,102375907,102381620,102384878,102386861,102390056,102394469,102396531	102356138,102356400,102362718,102368068,102372118,102376063,102381682,102384998,102387000,102390217,102394627,102398758	Gene ID= ENSG00000115604.10 TPM= 5.25 Transcript Type= protein_coding
chr2	102356283	102398775	102356283	102398775	+	ENST00000233957.5@IL18R1	ENST00000233957.5	protein_coding	102356283,102362633,102367825,102371953,102375907,102381620,102384878,102386861,102390056,102394469,102396531	102356400,102362718,102368068,102372118,102376063,102381682,102384998,102387000,102390217,102394627,102398775	Gene ID= ENSG00000115604.10 TPM= 4.09 Transcript Type= protein_coding
chr2	102418689	102452565	102418689	102452565	+	ENST00000264260.6@IL18RAP	ENST00000264260.6	protein_coding	102418689,102419561,102423178,102423811,102424231,102437212,102441312,102443200,102445189,102447070,102450848,102451766	102418940,102419797,102423347,102424135,102424414,102437362,102441377,102443323,102445340,102447207,102451021,102452565	Gene ID= ENSG00000115607.9 TPM= 3.5 Transcript Type= protein_coding
chr2	102715840	102736854	102715840	102736854	-	ENST00000258436.9@MFSD9	ENST00000258436.9	protein_coding	102736646,102732322,102731025,102726845,102723700,102715840	102736854,102732409,102731068,102726974,102723909,102719207	Gene ID= ENSG00000135953.10 TPM= 2.34 Transcript Type= protein_coding
chr2	102736908	102817416	102736908	102817416	+	ENST00000409528.5@TMEM182	ENST00000409528.5	protein_coding	102736908,102762587,102764329,102797863,102814748	102737013,102762686,102764427,102798000,102817416	Gene ID= ENSG00000170417.15 TPM= 1.17 Transcript Type= protein_coding
chr2	105038040	105099960	105038040	105099960	+	transcript5046.chr2.nnic@MRPS9	transcript5046.chr2.nnic	protein_coding	105038040,105049171,105071313,105071459,105079983,105088984,105089411,105092401,105093530,105097155,105099670	105038227,105049350,105071375,105071489,105080062,105089069,105089995,105092569,105093638,105097324,105099960	Gene ID= ENSG00000135972.8 TPM= 3.5 Transcript Type= NA
chr2	105037983	105099960	105037983	105099960	+	ENST00000258455.7@MRPS9	ENST00000258455.7	protein_coding	105037983,105049171,105071313,105071459,105079983,105088984,105089920,105092401,105093530,105097155,105099670	105038227,105049350,105071375,105071489,105080062,105089069,105089995,105092569,105093638,105097324,105099960	Gene ID= ENSG00000135972.8 TPM= 26.85 Transcript Type= protein_coding
chr2	105040163	105041728	105040163	105041728	-	transcript5052.chr2.nnic@NA	transcript5052.chr2.nnic	NA	105040163	105041728	Gene ID= novel_gene_chr2_5053 TPM= 2.34 Transcript Type= NA
chr2	105098933	105099959	105098933	105099959	+	transcript5050.chr2.nnic@NA	transcript5050.chr2.nnic	NA	105098933	105099959	Gene ID= novel_gene_chr2_5051 TPM= 2.34 Transcript Type= NA
chr2	105264373	105329722	105264373	105329722	-	transcript5055.chr2.nnic@TGFBRAP1	transcript5055.chr2.nnic	protein_coding	105329625,105307614,105298511,105296356,105284316,105280382,105277614,105275560,105273544,105272855,105269272,105267217,105264373	105329722,105308318,105298705,105296510,105284398,105280723,105277671,105275703,105273690,105273014,105269705,105267559,105267188	Gene ID= ENSG00000135966.12 TPM= 6.92 Transcript Type= NA
chr2	105249404	105329722	105249404	105329722	-	transcript5062.chr2.nnic@TGFBRAP1	transcript5062.chr2.nnic	protein_coding	105329625,105307614,105298511,105296356,105284316,105280382,105277614,105275560,105273544,105272855,105269272,105249404	105329722,105308318,105298705,105296510,105284398,105280723,105277671,105275703,105273690,105273014,105269705,105250412	Gene ID= ENSG00000135966.12 TPM= 5.57 Transcript Type= NA
chr2	105264414	105330034	105264414	105330034	-	ENST00000393359.6@TGFBRAP1	ENST00000393359.6	protein_coding	105329625,105307614,105298511,105296356,105284316,105280382,105277614,105275560,105273544,105272855,105269272,105264414	105330034,105308318,105298705,105296510,105284398,105280723,105277671,105275703,105273690,105273014,105269705,105267559	Gene ID= ENSG00000135966.12 TPM= 14.33 Transcript Type= protein_coding
chr2	105249404	105329721	105249404	105329721	-	transcript5072.chr2.nnic@TGFBRAP1	transcript5072.chr2.nnic	protein_coding	105329625,105307614,105298511,105296356,105280382,105277614,105275560,105273544,105272855,105269272,105249404	105329721,105308318,105298705,105296510,105280723,105277671,105275703,105273690,105273014,105269705,105250412	Gene ID= ENSG00000135966.12 TPM= 3.06 Transcript Type= NA
chr2	105337532	105345596	105337532	105345596	+	ENST00000410049.1@C2orf49	ENST00000410049.1	protein_coding	105337532,105339583,105342848,105343101,105345315	105337686,105339749,105342974,105343223,105345596	Gene ID= ENSG00000135974.9 TPM= 1.17 Transcript Type= protein_coding
chr2	105337359	105349211	105337359	105349211	+	ENST00000258457.6@C2orf49	ENST00000258457.6	protein_coding	105337359,105339583,105342848,105345315	105337686,105339749,105343223,105349211	Gene ID= ENSG00000135974.9 TPM= 2.34 Transcript Type= protein_coding
chr2	105360812	105399224	105360812	105399224	-	ENST00000344213.8@FHL2	ENST00000344213.8	protein_coding	105398842,105396647,105386361,105373559,105367570,105363285,105360812	105399224,105396697,105386540,105373733,105367739,105363471,105361434	Gene ID= ENSG00000115641.18 TPM= 3.5 Transcript Type= protein_coding
chr2	105360828	105399061	105360828	105399061	-	ENST00000322142.12@FHL2	ENST00000322142.12	protein_coding	105398970,105396647,105386361,105373559,105367570,105363285,105360828	105399061,105396697,105386540,105373733,105367739,105363471,105361434	Gene ID= ENSG00000115641.18 TPM= 1.17 Transcript Type= protein_coding
chr2	105360826	105399051	105360826	105399051	-	ENST00000393353.7@FHL2	ENST00000393353.7	protein_coding	105398842,105386361,105373559,105367570,105363285,105360826	105399051,105386540,105373733,105367739,105363471,105361434	Gene ID= ENSG00000115641.18 TPM= 9.34 Transcript Type= protein_coding
chr2	105360861	105399050	105360861	105399050	-	ENST00000408995.5@FHL2	ENST00000408995.5	protein_coding	105398970,105386361,105373559,105367570,105363285,105360861	105399050,105386540,105373733,105367739,105363471,105361434	Gene ID= ENSG00000115641.18 TPM= 7.01 Transcript Type= protein_coding
chr2	105744813	105894272	105744813	105894272	+	transcript5089.chr2.nnic@NCK2	transcript5089.chr2.nnic	protein_coding	105744813,105746178,105816430,105855048,105881328,105892982	105745138,105746339,105816613,105855289,105882049,105894272	Gene ID= ENSG00000071051.13 TPM= 21.02 Transcript Type= NA
chr2	105744897	105894274	105744897	105894274	+	ENST00000233154.8@NCK2	ENST00000233154.8	protein_coding	105744897,105816430,105855048,105881328,105892982	105745138,105816613,105855289,105882049,105894274	Gene ID= ENSG00000071051.13 TPM= 189.15 Transcript Type= protein_coding
chr2	106065656	106078159	106065656	106078159	+	ENST00000238044.7@C2orf40	ENST00000238044.7	protein_coding	106065656,106071844,106073886,106077765	106065843,106071891,106074043,106078159	Gene ID= ENSG00000119147.9 TPM= 8.17 Transcript Type= protein_coding
chr2	106093308	106194385	106093308	106194385	-	transcript5105.chr2.nnic@UXS1	transcript5105.chr2.nnic	protein_coding	106194148,106166056,106164736,106163667,106158058,106145190,106129674,106122970,106112646,106104794,106101058,106098716,106096718,106093308	106194385,106166083,106164784,106163710,106158118,106145370,106129778,106123091,106112765,106104837,106101118,106098773,106096821,106094157	Gene ID= ENSG00000115652.14 TPM= 5.06 Transcript Type= NA
chr2	106093314	106194303	106093314	106194303	-	transcript5106.chr2.nnic@UXS1	transcript5106.chr2.nnic	protein_coding	106194148,106166056,106164736,106163667,106158058,106145190,106129674,106125620,106122970,106112646,106104794,106101058,106098716,106093314	106194303,106166083,106164784,106163710,106158118,106145370,106129778,106125679,106123091,106112765,106104837,106101118,106098773,106094157	Gene ID= ENSG00000115652.14 TPM= 5.06 Transcript Type= NA
chr2	106093303	106194339	106093303	106194339	-	ENST00000283148.11@UXS1	ENST00000283148.11	protein_coding	106194148,106166056,106164736,106163667,106158058,106145190,106129674,106125620,106122970,106112646,106104794,106101058,106098716,106096718,106093303	106194339,106166083,106164799,106163710,106158118,106145370,106129778,106125679,106123091,106112765,106104837,106101118,106098773,106096821,106094157	Gene ID= ENSG00000115652.14 TPM= 133.49 Transcript Type= protein_coding
chr2	106189960	106192569	106189960	106192569	+	transcript5112.chr2.nnic@NA	transcript5112.chr2.nnic	NA	106189960	106192569	Gene ID= novel_gene_chr2_5113 TPM= 5.84 Transcript Type= NA
chr2	106801604	106886768	106801604	106886768	-	transcript5114.chr2.nnic@ST6GAL2	transcript5114.chr2.nnic	protein_coding	106886731,106843035,106834049,106832565,106830066,106801604	106886768,106844034,106834146,106832666,106830240,106806949	Gene ID= ENSG00000144057.15 TPM= 3.5 Transcript Type= NA
chr2	108288639	108309915	108288639	108309915	+	ENST00000251481.10@SULT1C2	ENST00000251481.10	protein_coding	108288639,108293647,108294229,108300838,108304574,108305172,108305415,108308352	108289070,108293818,108294354,108300935,108304700,108305266,108305595,108309915	Gene ID= ENSG00000198203.9 TPM= 1.17 Transcript Type= protein_coding
chr2	108298973	108308713	108298973	108308713	+	ENST00000495441.1@SULT1C2	ENST00000495441.1	protein_coding	108298973,108305172,108305415,108308352	108304700,108305266,108305595,108308713	Gene ID= ENSG00000198203.9 TPM= 1.17 Transcript Type= retained_intron
chr2	108449217	108475562	108449217	108475562	+	transcript5129.chr2.nic@GCC2	transcript5129.chr2.nic	protein_coding	108449217,108449633,108451028,108452399,108468980,108469651,108472827,108475535	108449280,108449689,108451112,108452466,108469084,108472116,108472899,108475562	Gene ID= ENSG00000135968.20 TPM= 3.5 Transcript Type= NA
chr2	108448561	108509398	108448561	108509398	+	ENST00000309863.10@GCC2	ENST00000309863.10	protein_coding	108448561,108449633,108451028,108452399,108468980,108469651,108472827,108475535,108475752,108481697,108482287,108483062,108484149,108485636,108485831,108486511,108487699,108489838,108492573,108495291,108496970,108499553,108507560	108449280,108449689,108451112,108452466,108469084,108472116,108472899,108475635,108475850,108481816,108482451,108483166,108484311,108485736,108485908,108486648,108487820,108490014,108492790,108495485,108497109,108499754,108509398	Gene ID= ENSG00000135968.20 TPM= 11.68 Transcript Type= protein_coding
chr2	108534451	108684838	108534451	108684838	+	transcript5140.chr2.nnic@LIMS1	transcript5140.chr2.nnic	protein_coding	108534451,108659605,108670759,108672325,108672880,108675878,108676606,108677979,108680695,108683885	108534594,108659764,108670847,108672445,108673029,108676028,108676698,108678027,108680770,108684838	Gene ID= ENSG00000169756.16 TPM= 2.34 Transcript Type= NA
chr2	108588311	108684137	108588311	108684137	+	ENST00000332345.10@LIMS1	ENST00000332345.10	protein_coding	108588311,108659605,108670781,108672325,108672880,108675878,108676606,108677979,108680695,108683885	108588425,108659764,108670847,108672445,108673029,108676028,108676698,108678027,108680770,108684137	Gene ID= ENSG00000169756.16 TPM= 2.34 Transcript Type= protein_coding
chr2	108588466	108687246	108588466	108687246	+	ENST00000393310.5@LIMS1	ENST00000393310.5	protein_coding	108588466,108659605,108670781,108672325,108672880,108675878,108676606,108677979,108680695,108683885	108588628,108659764,108670847,108672445,108673029,108676028,108676698,108678027,108680770,108687246	Gene ID= ENSG00000169756.16 TPM= 21.02 Transcript Type= protein_coding
chr2	108621266	108684448	108621266	108684448	+	ENST00000409441.5@LIMS1	ENST00000409441.5	protein_coding	108621266,108659605,108670781,108672325,108672880,108675878,108676606,108677979,108680695,108683885	108621461,108659764,108670847,108672445,108673029,108676028,108676698,108678027,108680770,108684448	Gene ID= ENSG00000169756.16 TPM= 2.34 Transcript Type= protein_coding
chr2	108719481	108785811	108719481	108785811	+	ENST00000283195.10@RANBP2	ENST00000283195.10	protein_coding	108719481,108729132,108730774,108731322,108735532,108736104,108740489,108746711,108748920,108751264,108751528,108751871,108752998,108753426,108753825,108754905,108755176,108758413,108762101,108763237,108771701,108772489,108772868,108775732,108777130,108781269,108782128,108782528,108783596	108719678,108729199,108730885,108731474,108735762,108736249,108740681,108746798,108749129,108751445,108751703,108751994,108753159,108753563,108753971,108755084,108755259,108758548,108762195,108768388,108771871,108772581,108773046,108775936,108777231,108781429,108782401,108782862,108785811	Gene ID= ENSG00000153201.15 TPM= 10.51 Transcript Type= protein_coding
chr2	109127327	109128930	109127327	109128930	-	ENST00000567491.1@SH3RF3-AS1	ENST00000567491.1	lincRNA	109127327	109128930	Gene ID= ENSG00000259863.1 TPM= 1.17 Transcript Type= lincRNA
chr2	109542982	109614206	109542982	109614206	-	ENST00000397712.6@SEPT10	ENST00000397712.6	protein_coding	109613798,109593051,109585721,109585126,109574581,109567815,109565763,109564366,109553087,109546050,109542982	109614206,109593119,109585838,109585321,109574767,109567976,109565859,109564534,109553219,109546237,109544324	Gene ID= ENSG00000186522.14 TPM= 117.34 Transcript Type= protein_coding
chr2	109542982	109614062	109542982	109614062	-	transcript5196.chr2.nic@SEPT10	transcript5196.chr2.nic	protein_coding	109613798,109585721,109585126,109574581,109567815,109565763,109564366,109553087,109542982	109614062,109585838,109585321,109574767,109567976,109565859,109564534,109553219,109546237	Gene ID= ENSG00000186522.14 TPM= 5.06 Transcript Type= NA
chr2	109542986	109613927	109542986	109613927	-	ENST00000397714.6@SEPT10	ENST00000397714.6	protein_coding	109613798,109585721,109585126,109574581,109567815,109565763,109564366,109553087,109546050,109542986	109613927,109585838,109585321,109574767,109567976,109565859,109564534,109553219,109546237,109544324	Gene ID= ENSG00000186522.14 TPM= 4.67 Transcript Type= protein_coding
chr2	109544565	109548189	109544565	109548189	+	transcript5208.chr2.nnic@NA	transcript5208.chr2.nnic	NA	109544565	109548189	Gene ID= novel_gene_chr2_5209 TPM= 2.34 Transcript Type= NA
chr2	109614334	109618990	109614334	109618990	+	ENST00000356454.4@SOWAHC	ENST00000356454.4	protein_coding	109614334	109618990	Gene ID= ENSG00000198142.4 TPM= 33.86 Transcript Type= protein_coding
chr2	109794308	109857693	109794308	109857693	+	ENST00000016946.7@RGPD5	ENST00000016946.7	protein_coding	109794308,109801783,109803432,109803979,109808174,109808750,109813460,109819696,109821905,109824222,109824487,109824830,109825876,109826301,109826701,109827792,109828065,109831317,109834997,109835819,109845103,109847810,109855862	109794537,109801850,109803543,109804131,109808404,109808895,109813655,109819783,109822114,109824403,109824662,109824953,109826034,109826438,109826847,109827971,109828148,109831452,109835091,109838042,109845242,109848011,109857693	Gene ID= ENSG00000015568.12 TPM= 18.68 Transcript Type= protein_coding
chr2	109898432	109968557	109898432	109968557	+	ENST00000640669.1@AC013271.1	ENST00000640669.1	protein_coding	109898432,109903253,109914411,109915952,109916507,109919489,109920254,109921640,109924348,109933088,109934812,109936178,109936719,109937975,109947364,109963469,109964688,109968070	109898910,109903412,109914477,109916072,109916656,109919643,109920346,109921688,109924423,109933205,109934894,109936338,109936943,109938072,109947845,109963550,109964802,109968557	Gene ID= ENSG00000284337.1 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr2	109947714	109968552	109947714	109968552	+	ENST00000433786.1@AC013268.1	ENST00000433786.1	transcribed_unprocessed_pseudogene	109947714,109964688,109968070	109947845,109964802,109968552	Gene ID= ENSG00000186148.13 TPM= 1.17 Transcript Type= processed_transcript
chr2	110083870	110116566	110083870	110116566	-	ENST00000272462.2@MALL	ENST00000272462.2	protein_coding	110115688,110091603,110087572,110083870	110116566,110091770,110087697,110085757	Gene ID= ENSG00000144063.3 TPM= 353.29 Transcript Type= protein_coding
chr2	110123708	110205005	110123708	110205005	-	transcript5218.chr2.nnic@NPHP1	transcript5218.chr2.nnic	protein_coding	110204900,110201421,110179624,110178423,110169806,110168452,110165052,110164688,110163048,110161603,110160127,110150182,110147916,110146753,110144493,110143542,110131679,110129186,110125637,110125189,110123708	110205005,110201494,110179684,110178547,110169998,110168553,110165155,110164730,110163132,110161697,110160255,110150256,110148026,110146835,110144569,110143641,110131791,110129259,110125681,110125323,110124063	Gene ID= ENSG00000144061.12 TPM= 2.34 Transcript Type= NA
chr2	110123336	110204992	110123336	110204992	-	ENST00000445609.6@NPHP1	ENST00000445609.6	protein_coding	110204900,110201421,110179624,110178423,110169806,110168452,110165052,110164688,110163048,110161603,110160127,110150182,110147916,110146753,110144493,110143542,110131679,110129186,110125637,110123336	110204992,110201494,110179684,110178547,110169998,110168553,110165155,110164730,110163135,110161697,110160255,110150256,110148026,110146835,110144569,110143641,110131791,110129259,110125681,110124063	Gene ID= ENSG00000144061.12 TPM= 1.17 Transcript Type= protein_coding
chr2	110123708	110204995	110123708	110204995	-	ENST00000417665.5@NPHP1	ENST00000417665.5	protein_coding	110204900,110201421,110179624,110178423,110169806,110168452,110165052,110164688,110163048,110161603,110160127,110150182,110147916,110146753,110144493,110143542,110131679,110129186,110125637,110125219,110123708	110204995,110201494,110179684,110178547,110169998,110168553,110165155,110164730,110163132,110161697,110160255,110150256,110148026,110146835,110144569,110143641,110131791,110129259,110125681,110125323,110124063	Gene ID= ENSG00000144061.12 TPM= 2.34 Transcript Type= protein_coding
chr2	110178041	110204999	110178041	110204999	-	ENST00000418527.1@NPHP1	ENST00000418527.1	protein_coding	110204900,110201421,110179624,110178041	110204999,110201494,110179684,110178547	Gene ID= ENSG00000144061.12 TPM= 1.17 Transcript Type= protein_coding
chr2	110211529	110245420	110211529	110245420	-	ENST00000414416.2@LINC00116	ENST00000414416.2	protein_coding	110244988,110222737,110219651,110217659,110216664,110215677,110214786,110212215,110211529	110245420,110222939,110219777,110217788,110216763,110215807,110214957,110212875,110211622	Gene ID= ENSG00000175701.10 TPM= 50.21 Transcript Type= protein_coding
chr2	110375138	110384442	110375138	110384442	-	ENST00000436665.2@LINC01106	ENST00000436665.2	lincRNA	110384315,110377650,110375138	110384442,110377834,110377068	Gene ID= ENSG00000175772.10 TPM= 2.34 Transcript Type= lincRNA
chr2	110375119	110384917	110375119	110384917	-	transcript5257.chr2.nnic@LINC01106	transcript5257.chr2.nnic	lincRNA	110384315,110375119	110384917,110377068	Gene ID= ENSG00000175772.10 TPM= 10.51 Transcript Type= NA
chr2	110386411	110433673	110386411	110433673	-	ENST00000488671.1@AC112229.4	ENST00000488671.1	processed_transcript	110433436,110424053,110423661,110386411	110433673,110424142,110423873,110387397	Gene ID= ENSG00000273471.1 TPM= 1.17 Transcript Type= processed_transcript
chr2	110515314	110611020	110515314	110611020	-	transcript5264.chr2.nnic@RGPD6	transcript5264.chr2.nnic	protein_coding	110610715,110569657,110567964,110567376,110563103,110562612,110557852,110551724,110549393,110547104,110546845,110546554,110545473,110545069,110544660,110543536,110543359,110540055,110536416,110533465,110526265,110523496,110515314	110611020,110569724,110568075,110567528,110563333,110562757,110558047,110551811,110549602,110547285,110547020,110546677,110545631,110545206,110544806,110543715,110543442,110540190,110536510,110535688,110526404,110523697,110515645	Gene ID= ENSG00000183054.11 TPM= 4.67 Transcript Type= NA
chr2	110637834	110655839	110637834	110655839	-	transcript5268.chr2.nic@BUB1	transcript5268.chr2.nic	protein_coding	110655739,110653436,110650546,110649234,110642119,110641642,110641307,110641034,110639742,110637834	110655839,110653523,110650784,110649377,110642234,110641803,110641464,110641205,110639848,110638159	Gene ID= ENSG00000169679.14 TPM= 4.67 Transcript Type= NA
chr2	110732545	111118548	110732545	111118548	+	transcript5270.chr2.nnic@ACOXL	transcript5270.chr2.nnic	protein_coding	110732545,110768368,110784732,110793650,110794076,110798610,110799014,110801652,110805263,110841371,110908789,110933489,110963624,110987108,110995893,111031627,111049218,111092865,111114108,111116945,111117616	110732774,110768464,110784815,110793736,110794174,110798724,110799100,110801724,110805395,110841405,110908905,110933642,110963713,110987217,110996004,111031714,111049288,111092966,111114309,111117095,111118548	Gene ID= ENSG00000153093.18 TPM= 2.63 Transcript Type= NA
chr2	110732545	111118540	110732545	111118540	+	transcript5277.chr2.nic@ACOXL	transcript5277.chr2.nic	protein_coding	110732545,110768368,110784732,110793650,110794076,110798610,110799014,110801652,110805263,110841371,110908789,110933489,110963624,110987108,110995893,111031627,111049218,111092865,111117616	110732774,110768464,110784815,110793736,110794174,110798724,110799100,110801724,110805395,110841405,110908905,110933642,110963713,110987217,110996004,111031714,111049288,111092966,111118540	Gene ID= ENSG00000153093.18 TPM= 4.96 Transcript Type= NA
chr2	110732545	111118548	110732545	111118548	+	transcript5280.chr2.nnic@ACOXL	transcript5280.chr2.nnic	protein_coding	110732545,110768368,110784732,110793650,110794076,110798610,110799014,110801652,110805263,110841371,110908789,110933489,110987108,110995893,111031627,111049218,111092865,111116945,111117616	110732774,110768464,110784815,110793736,110794174,110798724,110799100,110801724,110805395,110841405,110908905,110933642,110987217,110996004,111031714,111049288,111092966,111117095,111118548	Gene ID= ENSG00000153093.18 TPM= 4.96 Transcript Type= NA
chr2	110732530	111118540	110732530	111118540	+	transcript5281.chr2.nnic@ACOXL	transcript5281.chr2.nnic	protein_coding	110732530,110768368,110784732,110793650,110794076,110798610,110799014,110801652,110805263,110841371,110908789,110933489,110987108,110995893,111031627,111049218,111092865,111117616	110732641,110768464,110784815,110793736,110794174,110798724,110799100,110801724,110805395,110841405,110908905,110933642,110987217,110996004,111031714,111049288,111092966,111118540	Gene ID= ENSG00000153093.18 TPM= 2.63 Transcript Type= NA
chr2	110732545	111093244	110732545	111093244	+	transcript5295.chr2.nic@ACOXL	transcript5295.chr2.nic	protein_coding	110732545,110768368,110784732,110793650,110794076,110798610,110799014,110801652,110805263,110841371,110908789,110933489,110987108,110995893,111031627,111049218,111092865	110732774,110768464,110784815,110793736,110794174,110798724,110799100,110801724,110805395,110841405,110908905,110933642,110987217,110996004,111031714,111049288,111093244	Gene ID= ENSG00000153093.18 TPM= 3.5 Transcript Type= NA
chr2	110732603	111002490	110732603	111002490	+	transcript5299.chr2.nnic@ACOXL	transcript5299.chr2.nnic	protein_coding	110732603,110768368,110784732,110793650,110794076,110798610,110799014,110801652,110805263,110841371,110908789,110933489,110963624,110987108,110995893,110999724	110732774,110768464,110784815,110793736,110794174,110798724,110799100,110801724,110805395,110841405,110908905,110933642,110963713,110987217,110996004,111002490	Gene ID= ENSG00000153093.18 TPM= 2.34 Transcript Type= NA
chr2	110732545	111025296	110732545	111025296	+	transcript5301.chr2.nnic@ACOXL	transcript5301.chr2.nnic	protein_coding	110732545,110768368,110784732,110793650,110794076,110798610,110799014,110801652,110805263,110841371,110908789,110933489,110963624,110987108,110995893,111024206	110732774,110768464,110784815,110793736,110794174,110798724,110799100,110801724,110805395,110841405,110908905,110933642,110963713,110987217,110996004,111025296	Gene ID= ENSG00000153093.18 TPM= 2.34 Transcript Type= NA
chr2	110732634	110888017	110732634	110888017	+	ENST00000340561.8@ACOXL	ENST00000340561.8	protein_coding	110732634,110768368,110784732,110793650,110794076,110798610,110799014,110801652,110805263,110841371,110886781	110732774,110768464,110784815,110793736,110794174,110798724,110799100,110801724,110805395,110841405,110888017	Gene ID= ENSG00000153093.18 TPM= 1.17 Transcript Type= protein_coding
chr2	110948559	110953076	110948559	110953076	-	transcript5317.chr2.nnic@NA	transcript5317.chr2.nnic	NA	110948559	110953076	Gene ID= novel_gene_chr2_5318 TPM= 3.5 Transcript Type= NA
chr2	111118491	111122450	111118491	111122450	-	transcript5319.chr2.nnic@NA	transcript5319.chr2.nnic	NA	111118491	111122450	Gene ID= novel_gene_chr2_5320 TPM= 4.67 Transcript Type= NA
chr2	111122690	111154376	111122690	111154376	+	transcript5313.chr2.nic@BCL2L11	transcript5313.chr2.nic	protein_coding	111122690,111123733,111124050,111150044	111122923,111123869,111124139,111154376	Gene ID= ENSG00000153094.22 TPM= 3.5 Transcript Type= NA
chr2	111122619	111168445	111122619	111168445	+	transcript5314.chr2.nic@BCL2L11	transcript5314.chr2.nic	protein_coding	111122619,111123733,111150044,111164133	111122923,111124139,111150147,111168445	Gene ID= ENSG00000153094.22 TPM= 3.5 Transcript Type= NA
chr2	111429309	111495086	111429309	111495086	-	ENST00000409569.2@MIR4435-2HG	ENST00000409569.2	lincRNA	111494885,111429309	111495086,111429620	Gene ID= ENSG00000172965.14 TPM= 10.51 Transcript Type= lincRNA
chr2	111767637	111884690	111767637	111884690	-	ENST00000341068.7@ANAPC1	ENST00000341068.7	protein_coding	111883942,111880613,111878810,111873613,111873308,111872630,111868023,111864806,111863675,111862389,111858306,111856796,111856614,111850776,111847725,111847138,111843412,111838438,111834604,111833220,111831286,111825777,111825131,111824966,111822422,111821239,111818840,111815370,111808947,111805802,111803705,111803448,111802428,111800797,111794818,111794233,111794078,111792362,111788234,111785360,111784323,111783897,111782369,111780299,111778675,111776859,111772341,111767637	111884690,111880849,111878971,111873664,111873408,111872712,111868096,111864951,111863895,111862598,111858401,111856886,111856679,111850910,111847865,111847198,111843599,111838512,111834872,111833311,111831434,111825855,111825167,111825036,111822600,111821453,111818958,111815641,111809181,111805893,111803839,111803530,111802506,111800871,111794894,111794323,111794131,111792555,111788320,111785477,111784400,111783964,111782507,111780385,111778770,111777057,111772475,111769406	Gene ID= ENSG00000153107.11 TPM= 4.67 Transcript Type= protein_coding
chr2	111898479	112029561	111898479	112029561	+	ENST00000295408.8@MERTK	ENST00000295408.8	protein_coding	111898479,111929120,111944960,111947394,111965191,111968137,111975289,111982842,111994251,111997323,112001201,112003092,112003904,112008383,112009948,112019413,112021422,112022258,112028351	111898796,111929540,111945060,111947567,111965277,111968252,111975472,111982993,111994404,111997476,112001286,112003187,112003984,112008475,112010066,112019522,112021581,112022394,112029561	Gene ID= ENSG00000153208.16 TPM= 4.67 Transcript Type= protein_coding
chr2	111898610	112040639	111898610	112040639	+	transcript5334.chr2.nnic@MERTK	transcript5334.chr2.nnic	protein_coding	111898610,111929120,111944960,111947394,111965191,111968137,111975289,111982842,111994251,111997323,112001201,112003092,112003904,112008383,112009948,112019413,112021422,112022258,112039351	111898796,111929540,111945060,111947567,111965277,111968252,111975472,111982993,111994404,111997476,112001286,112003187,112003984,112008475,112010066,112019522,112021581,112022394,112040639	Gene ID= ENSG00000153208.16 TPM= 2.34 Transcript Type= NA
chr2	111898608	112029366	111898608	112029366	+	ENST00000421804.6@MERTK	ENST00000421804.6	protein_coding	111898608,111929120,111944960,111947394,111965191,111968137,111975289,111982842,111994251,111997323,112001201,112003092,112003904,112008383,112009948,112019413,112021422,112022258,112028351,112029324	111898796,111929540,111945060,111947567,111965277,111968252,111975472,111982993,111994404,111997476,112001286,112003187,112003984,112008475,112010066,112019522,112021581,112022394,112029293,112029366	Gene ID= ENSG00000153208.16 TPM= 7.01 Transcript Type= protein_coding
chr2	112138385	112188216	112138385	112188216	+	ENST00000331203.6@FBLN7	ENST00000331203.6	protein_coding	112138385,112159676,112165001,112175714,112181739,112182791,112185201,112187134	112138730,112159835,112165171,112175839,112181876,112182928,112185339,112188216	Gene ID= ENSG00000144152.12 TPM= 2.34 Transcript Type= protein_coding
chr2	112211525	112255111	112211525	112255111	-	ENST00000409573.6@ZC3H8	ENST00000409573.6	protein_coding	112254908,112250191,112238315,112236562,112234120,112233260,112231838,112230903,112211525	112255111,112250272,112238528,112236695,112234236,112233371,112231947,112230950,112216468	Gene ID= ENSG00000144161.12 TPM= 6.42 Transcript Type= protein_coding
chr2	112215865	112255087	112215865	112255087	-	ENST00000272570.9@ZC3H8	ENST00000272570.9	protein_coding	112254908,112250191,112238315,112236562,112234120,112233258,112231838,112230903,112215865	112255087,112250272,112238528,112236695,112234236,112233371,112231945,112230950,112216468	Gene ID= ENSG00000144161.12 TPM= 6.42 Transcript Type= protein_coding
chr2	112275594	112340059	112275594	112340059	+	ENST00000409871.5@ZC3H6	ENST00000409871.5	protein_coding	112275594,112299849,112303229,112309885,112311804,112316470,112317221,112321756,112322649,112324152,112324964,112331005	112276026,112300029,112303351,112310161,112311937,112316586,112317332,112321865,112322902,112324663,112325197,112340059	Gene ID= ENSG00000188177.13 TPM= 1.17 Transcript Type= protein_coding
chr2	112370092	112433645	112370092	112433645	-	ENST00000302558.7@RGPD8	ENST00000302558.7	protein_coding	112433382,112424240,112422548,112421960,112417684,112417193,112412431,112406297,112403966,112401667,112401408,112401117,112400036,112399632,112399223,112398099,112397922,112394618,112390975,112388024,112380824,112378053,112370092	112433645,112424307,112422659,112422112,112417914,112417338,112412626,112406384,112404175,112401848,112401583,112401240,112400194,112399769,112399369,112398278,112398005,112394753,112391069,112390247,112380963,112378254,112370212	Gene ID= ENSG00000169629.11 TPM= 11.68 Transcript Type= protein_coding
chr2	112482121	112532406	112482121	112532406	+	transcript5359.chr2.nnic@TTL	transcript5359.chr2.nnic	protein_coding	112482121,112485917,112494143,112495897,112501206,112502912,112520282,112528681	112482501,112485995,112494375,112496028,112501341,112503181,112520425,112532406	Gene ID= ENSG00000114999.7 TPM= 5.78 Transcript Type= NA
chr2	112482121	112532404	112482121	112532404	+	transcript5363.chr2.nnic@TTL	transcript5363.chr2.nnic	protein_coding	112482121,112485917,112494143,112501206,112502912,112520282,112521222,112528681	112482501,112485995,112494375,112501341,112503181,112520425,112521341,112532404	Gene ID= ENSG00000114999.7 TPM= 7.53 Transcript Type= NA
chr2	112482139	112532406	112482139	112532406	+	transcript5368.chr2.nnic@TTL	transcript5368.chr2.nnic	protein_coding	112482139,112494143,112501206,112502912,112520282,112528681	112482501,112494375,112501341,112503181,112520425,112532406	Gene ID= ENSG00000114999.7 TPM= 10.45 Transcript Type= NA
chr2	112482139	112532403	112482139	112532403	+	transcript5370.chr2.nnic@TTL	transcript5370.chr2.nnic	protein_coding	112482139,112494143,112501206,112502912,112528681	112482501,112494375,112501341,112503181,112532403	Gene ID= ENSG00000114999.7 TPM= 5.78 Transcript Type= NA
chr2	112482164	112485289	112482164	112485289	+	transcript5373.chr2.nnic@NA	transcript5373.chr2.nnic	NA	112482164	112485289	Gene ID= novel_gene_chr2_5374 TPM= 2.34 Transcript Type= NA
chr2	112542189	112576299	112542189	112576299	+	ENST00000333990.10@POLR1B	ENST00000333990.10	protein_coding	112542189,112545831,112547012,112547421,112549267,112550866,112551775,112552645,112557910,112559293,112564366,112567967,112568746,112572562,112573562,112574847	112542671,112545922,112547179,112547567,112549399,112551002,112551998,112552816,112558081,112559574,112564499,112568137,112568902,112572758,112573815,112576299	Gene ID= ENSG00000125630.15 TPM= 1.75 Transcript Type= nonsense_mediated_decay
chr2	112541915	112576299	112541915	112576299	+	ENST00000263331.9@POLR1B	ENST00000263331.9	protein_coding	112541915,112547012,112547421,112549267,112550866,112551775,112552645,112557910,112559293,112564366,112567967,112568746,112572562,112573562,112574847	112542671,112547179,112547567,112549399,112551002,112551998,112552816,112558081,112559574,112564499,112568137,112568902,112572758,112573815,112576299	Gene ID= ENSG00000125630.15 TPM= 28.61 Transcript Type= protein_coding
chr2	112583250	112583506	112583250	112583506	-	transcript5391.chr2.nnic@NA	transcript5391.chr2.nnic	NA	112583250	112583506	Gene ID= novel_gene_chr2_5392 TPM= 2.34 Transcript Type= NA
chr2	112584441	112589040	112584441	112589040	+	ENST00000324913.9@CHCHD5	ENST00000324913.9	protein_coding	112584441,112585974,112586200,112588866	112584649,112586114,112586365,112589040	Gene ID= ENSG00000125611.15 TPM= 16.35 Transcript Type= protein_coding
chr2	112584448	112614982	112584448	112614982	+	transcript5384.chr2.nnic@CHCHD5	transcript5384.chr2.nnic	protein_coding	112584448,112585974,112586200,112614213	112584649,112586114,112586365,112614982	Gene ID= ENSG00000125611.15 TPM= 2.34 Transcript Type= NA
chr2	112590207	112592178	112590207	112592178	+	transcript5389.chr2.nnic@NA	transcript5389.chr2.nnic	NA	112590207	112592178	Gene ID= novel_gene_chr2_5390 TPM= 2.34 Transcript Type= NA
chr2	112645939	112663825	112645939	112663825	+	transcript5396.chr2.nic@SLC20A1	transcript5396.chr2.nic	protein_coding	112645939,112646563,112647324,112647653,112652702,112652889,112657122,112658825,112659204,112660387,112661142,112662864	112646129,112647162,112647464,112647738,112652798,112652947,112657241,112659094,112659762,112660572,112661226,112663825	Gene ID= ENSG00000144136.10 TPM= 13.04 Transcript Type= NA
chr2	112645857	112663827	112645857	112663827	+	ENST00000272542.7@SLC20A1	ENST00000272542.7	protein_coding	112645857,112646563,112647324,112647653,112652702,112657122,112658825,112659204,112660387,112661142,112662864	112646129,112647162,112647464,112647738,112652798,112657241,112659094,112659762,112660572,112661226,112663827	Gene ID= ENSG00000144136.10 TPM= 102.95 Transcript Type= protein_coding
chr2	112645939	112663825	112645939	112663825	+	transcript5398.chr2.nic@SLC20A1	transcript5398.chr2.nic	protein_coding	112645939,112646563,112647324,112647653,112652702,112657122,112658951,112659204,112660387,112661142,112662864	112646129,112647162,112647464,112647738,112652798,112657241,112659094,112659762,112660572,112661226,112663825	Gene ID= ENSG00000144136.10 TPM= 4.29 Transcript Type= NA
chr2	112656190	112658572	112656190	112658572	-	transcript5405.chr2.nnic@NA	transcript5405.chr2.nnic	NA	112656190	112658572	Gene ID= novel_gene_chr2_5406 TPM= 19.85 Transcript Type= NA
chr2	112829751	112836903	112829751	112836903	-	ENST00000263341.6@IL1B	ENST00000263341.6	protein_coding	112836708,112836183,112835566,112833374,112832662,112831292,112829751	112836903,112836244,112835617,112833575,112832826,112831422,112830573	Gene ID= ENSG00000125538.11 TPM= 4.67 Transcript Type= protein_coding
chr2	113127496	113134016	113127496	113134016	+	transcript5408.chr2.nnic@IL1RN	transcript5408.chr2.nnic	protein_coding	113127496,113127689,113129576,113131045,113132656	113127550,113127740,113129664,113131157,113134016	Gene ID= ENSG00000136689.18 TPM= 19.85 Transcript Type= NA
chr2	113235535	113266973	113235535	113266973	+	transcript5420.chr2.nic@PAX8-AS1	transcript5420.chr2.nic	processed_transcript	113235535,113238090,113255390,113259264,113263278,113265476	113235570,113238212,113255549,113259584,113263454,113266973	Gene ID= ENSG00000189223.14 TPM= 5.84 Transcript Type= NA
chr2	113235731	113266973	113235731	113266973	+	transcript5421.chr2.nnic@PAX8-AS1	transcript5421.chr2.nnic	processed_transcript	113235731,113238090,113255390,113259264,113263278,113265476	113236613,113238212,113255549,113259584,113263454,113266973	Gene ID= ENSG00000189223.14 TPM= 4.67 Transcript Type= NA
chr2	113235535	113266973	113235535	113266973	+	transcript5424.chr2.nic@PAX8-AS1	transcript5424.chr2.nic	processed_transcript	113235535,113238090,113259264,113263278,113265476	113235570,113238212,113259584,113263454,113266973	Gene ID= ENSG00000189223.14 TPM= 2.34 Transcript Type= NA
chr2	113235535	113266973	113235535	113266973	+	transcript5428.chr2.nnic@PAX8-AS1	transcript5428.chr2.nnic	processed_transcript	113235535,113238090,113263278,113265476	113235570,113238212,113263454,113266973	Gene ID= ENSG00000189223.14 TPM= 2.34 Transcript Type= NA
chr2	113235536	113240825	113235536	113240825	+	transcript5431.chr2.nnic@PAX8-AS1	transcript5431.chr2.nnic	processed_transcript	113235536,113236513,113238090,113239089	113235570,113236622,113238212,113240825	Gene ID= ENSG00000189223.14 TPM= 5.74 Transcript Type= NA
chr2	113235537	113240825	113235537	113240825	+	transcript5434.chr2.nnic@PAX8-AS1	transcript5434.chr2.nnic	processed_transcript	113235537,113235841,113238090,113239089	113235570,113236613,113238212,113240825	Gene ID= ENSG00000189223.14 TPM= 6.91 Transcript Type= NA
chr2	113235527	113241410	113235527	113241410	+	ENST00000437551.5@PAX8-AS1	ENST00000437551.5	processed_transcript	113235527,113238090,113239089,113241201	113235570,113238212,113241101,113241410	Gene ID= ENSG00000189223.14 TPM= 10.8 Transcript Type= antisense_RNA
chr2	113235538	113240825	113235538	113240825	+	transcript5444.chr2.nnic@PAX8-AS1	transcript5444.chr2.nnic	processed_transcript	113235538,113238090,113239089	113236613,113238212,113240825	Gene ID= ENSG00000189223.14 TPM= 8.08 Transcript Type= NA
chr2	113235693	113240825	113235693	113240825	+	transcript5452.chr2.nnic@NA	transcript5452.chr2.nnic	NA	113235693	113240825	Gene ID= novel_gene_chr2_5453 TPM= 5.84 Transcript Type= NA
chr2	113239072	113243358	113239072	113243358	-	transcript5454.chr2.nnic@NA	transcript5454.chr2.nnic	NA	113239072	113243358	Gene ID= novel_gene_chr2_5455 TPM= 3.5 Transcript Type= NA
chr2	113437691	113496189	113437691	113496189	+	ENST00000259199.8@CBWD2	ENST00000259199.8	protein_coding	113437691,113441351,113443767,113444964,113453139,113454741,113460673,113462408,113465129,113471033,113482177,113493757,113493929,113495120,113495637	113438022,113441437,113443863,113445055,113453198,113454778,113460719,113462494,113465173,113471089,113482228,113493825,113493994,113495249,113496189	Gene ID= ENSG00000136682.14 TPM= 40.87 Transcript Type= protein_coding
chr2	113437763	113496171	113437763	113496171	+	ENST00000416503.6@CBWD2	ENST00000416503.6	protein_coding	113437763,113441351,113443767,113444964,113453139,113454741,113460673,113462408,113465129,113482177,113493757,113493929,113495120,113495637	113438022,113441437,113443863,113445055,113453198,113454778,113460719,113462494,113465173,113482228,113493825,113493994,113495249,113496171	Gene ID= ENSG00000136682.14 TPM= 7.01 Transcript Type= protein_coding
chr2	113437791	113496119	113437791	113496119	+	ENST00000358604.7@CBWD2	ENST00000358604.7	protein_coding	113437791,113439020,113441351,113443767,113444964,113453139,113454741,113460673,113462408,113465129,113471033,113482177,113493757,113493929,113495120,113495637	113438022,113439117,113441437,113443863,113445055,113453198,113454778,113460719,113462494,113465173,113471089,113482228,113493825,113493994,113495249,113496119	Gene ID= ENSG00000136682.14 TPM= 5.84 Transcript Type= nonsense_mediated_decay
chr2	113540052	113542665	113540052	113542665	-	ENST00000450636.1@PGM5P4-AS1	ENST00000450636.1	lincRNA	113542547,113540052	113542665,113540469	Gene ID= ENSG00000231943.7 TPM= 1.17 Transcript Type= lincRNA
chr2	113540024	113542687	113540024	113542687	-	transcript5478.chr2.nnic@NA	transcript5478.chr2.nnic	NA	113540024	113542687	Gene ID= novel_gene_chr2_5479 TPM= 4.67 Transcript Type= NA
chr2	113541461	113570054	113541461	113570054	+	transcript5469.chr2.nnic@PGM5P4	transcript5469.chr2.nnic	unprocessed_pseudogene	113541461,113556491,113563136,113568640	113541678,113556580,113563298,113570054	Gene ID= ENSG00000225398.3 TPM= 3.5 Transcript Type= NA
chr2	113541838	113570054	113541838	113570054	+	transcript5472.chr2.nnic@PGM5P4	transcript5472.chr2.nnic	unprocessed_pseudogene	113541838,113556491,113563136,113568640	113542163,113556580,113563298,113570054	Gene ID= ENSG00000225398.3 TPM= 2.34 Transcript Type= NA
chr2	113541476	113543477	113541476	113543477	+	transcript5476.chr2.nnic@NA	transcript5476.chr2.nnic	NA	113541476	113543477	Gene ID= novel_gene_chr2_5477 TPM= 2.34 Transcript Type= NA
chr2	113599028	113602000	113599028	113602000	-	transcript5515.chr2.nic@DDX11L2	transcript5515.chr2.nic	unprocessed_pseudogene	113601212,113599028	113602000,113600826	Gene ID= ENSG00000236397.3 TPM= 3.5 Transcript Type= NA
chr2	113609685	113627105	113609685	113627105	-	transcript5506.chr2.nnic@RPL23AP7	transcript5506.chr2.nnic	transcribed_processed_pseudogene	113626881,113625609,113609685	113627105,113625729,113612247	Gene ID= ENSG00000240356.6 TPM= 2.72 Transcript Type= NA
chr2	113611684	113627090	113611684	113627090	-	ENST00000391616.3@RPL23AP7	ENST00000391616.3	transcribed_processed_pseudogene	113627038,113625609,113611684	113627090,113625729,113612247	Gene ID= ENSG00000240356.6 TPM= 3.89 Transcript Type= processed_transcript
chr2	113627229	113643396	113627229	113643396	+	ENST00000393167.7@RABL2A	ENST00000393167.7	protein_coding	113627229,113628554,113632915,113634153,113635051,113640894,113641356,113641781,113642031	113627400,113628713,113632944,113634232,113635130,113641005,113641450,113641864,113643396	Gene ID= ENSG00000144134.18 TPM= 14.59 Transcript Type= protein_coding
chr2	113627264	113643368	113627264	113643368	+	ENST00000450954.5@RABL2A	ENST00000450954.5	protein_coding	113627264,113628550,113632915,113634153,113635051,113641353,113641781,113642031	113627400,113628713,113632944,113634232,113635130,113641480,113641864,113643368	Gene ID= ENSG00000144134.18 TPM= 2.92 Transcript Type= nonsense_mediated_decay
chr2	113712792	113756823	113712792	113756823	-	ENST00000245680.6@SLC35F5	ENST00000245680.6	protein_coding	113756370,113755454,113755165,113750425,113746277,113743713,113742692,113735777,113734586,113731584,113729401,113725378,113723104,113719154,113717753,113712792	113756823,113755544,113755306,113750568,113746339,113743794,113742879,113735858,113734673,113731648,113729505,113725537,113723194,113719308,113717850,113715195	Gene ID= ENSG00000115084.13 TPM= 5.84 Transcript Type= protein_coding
chr2	113714357	113756652	113714357	113756652	-	transcript5527.chr2.nnic@SLC35F5	transcript5527.chr2.nnic	protein_coding	113756370,113755454,113755165,113750425,113746277,113743713,113742692,113735777,113734586,113731584,113729401,113725378,113723104,113719154,113714357	113756652,113755544,113755306,113750568,113746339,113743794,113742879,113735858,113734673,113731648,113729505,113725537,113723194,113719308,113715195	Gene ID= ENSG00000115084.13 TPM= 2.34 Transcript Type= NA
chr2	113717310	113756652	113717310	113756652	-	transcript5529.chr2.nic@SLC35F5	transcript5529.chr2.nic	protein_coding	113756370,113755454,113755165,113750425,113746277,113743713,113742692,113735777,113734586,113731584,113729401,113725378,113723104,113719154,113717310	113756652,113755544,113755306,113750568,113746339,113743794,113742879,113735858,113734673,113731648,113729505,113725537,113723194,113719308,113717850	Gene ID= ENSG00000115084.13 TPM= 3.5 Transcript Type= NA
chr2	113711585	113713768	113711585	113713768	+	transcript5537.chr2.nnic@NA	transcript5537.chr2.nnic	NA	113711585	113713768	Gene ID= novel_gene_chr2_5538 TPM= 65.39 Transcript Type= NA
chr2	117814650	117832379	117814650	117832379	+	ENST00000263239.6@DDX18	ENST00000263239.6	protein_coding	117814650,117817444,117819649,117821161,117821650,117821862,117822147,117824569,117824940,117825447,117826269,117828949,117829289,117830582	117814862,117817728,117819792,117821296,117821750,117822061,117822261,117824708,117825101,117825599,117826382,117829005,117829466,117832379	Gene ID= ENSG00000088205.12 TPM= 30.36 Transcript Type= protein_coding
chr2	117919594	118014167	117919594	118014167	-	transcript5562.chr2.nic@CCDC93	transcript5562.chr2.nic	protein_coding	118013954,118008545,118006722,118000821,117996264,117995446,117985969,117977994,117975188,117974850,117973908,117958365,117952373,117949322,117948105,117946811,117945529,117944024,117941189,117939029,117935495,117931037,117919594	118014167,118008658,118006816,118000932,117996362,117995502,117986069,117978030,117975280,117974900,117973994,117958481,117952435,117949395,117948186,117946882,117945582,117944086,117941297,117939111,117936739,117931150,117920396	Gene ID= ENSG00000125633.10 TPM= 4.67 Transcript Type= NA
chr2	118088474	118110028	118088474	118110028	+	ENST00000245787.8@INSIG2	ENST00000245787.8	protein_coding	118088474,118096419,118103197,118106737,118107090,118108281	118088541,118096800,118103321,118106903,118107189,118110028	Gene ID= ENSG00000125629.14 TPM= 70.06 Transcript Type= protein_coding
chr2	118088474	118110997	118088474	118110997	+	ENST00000485520.5@INSIG2	ENST00000485520.5	protein_coding	118088474,118096419,118103197,118106737,118107090,118108281	118088541,118096426,118103321,118106903,118107189,118110997	Gene ID= ENSG00000125629.14 TPM= 3.5 Transcript Type= processed_transcript
chr2	118182939	118186373	118182939	118186373	-	ENST00000449075.1@AC093901.1	ENST00000449075.1	lincRNA	118186231,118185338,118182939	118186373,118185390,118183322	Gene ID= ENSG00000226856.5 TPM= 1.17 Transcript Type= lincRNA
chr2	118942166	118994660	118942166	118994660	+	ENST00000327097.4@MARCO	ENST00000327097.4	protein_coding	118942166,118969160,118970114,118971499,118974333,118974521,118977471,118977828,118981409,118981621,118982156,118982348,118990589,118991777,118992432,118993124,118994387	118942397,118969261,118970338,118971534,118974440,118974565,118977515,118977935,118981507,118981656,118982254,118982410,118990633,118991875,118992476,118993300,118994660	Gene ID= ENSG00000019169.10 TPM= 308.05 Transcript Type= protein_coding
chr2	118942139	118994660	118942139	118994660	+	transcript5590.chr2.nnic@MARCO	transcript5590.chr2.nnic	protein_coding	118942139,118974333,118974521,118977471,118977828,118981409,118981621,118982156,118982348,118990589,118991777,118992432,118993124,118994387	118942397,118974440,118974565,118977515,118977935,118981507,118981656,118982254,118982410,118990633,118991875,118992476,118993300,118994660	Gene ID= ENSG00000019169.10 TPM= 24.9 Transcript Type= NA
chr2	119223831	119265652	119223831	119265652	+	ENST00000393110.6@STEAP3	ENST00000393110.6	protein_coding	119223831,119230620,119245489,119247679,119254684,119263057	119223888,119231034,119245988,119248206,119254848,119265652	Gene ID= ENSG00000115107.19 TPM= 22.18 Transcript Type= protein_coding
chr2	119302228	119366828	119302228	119366828	-	ENST00000334816.11@C2orf76	ENST00000334816.11	protein_coding	119366790,119339827,119321154,119317466,119311622,119302228	119366828,119339971,119321204,119317503,119311703,119302548	Gene ID= ENSG00000186132.14 TPM= 8.17 Transcript Type= protein_coding
chr2	119366924	119372550	119366924	119372550	+	ENST00000535757.5@DBI	ENST00000535757.5	protein_coding	119366924,119367559,119368188,119370740,119372245	119367090,119367644,119368305,119370802,119372550	Gene ID= ENSG00000155368.16 TPM= 9.34 Transcript Type= protein_coding
chr2	119366921	119372560	119366921	119372560	+	ENST00000355857.7@DBI	ENST00000355857.7	protein_coding	119366921,119368188,119370740,119372245	119367060,119368305,119370802,119372560	Gene ID= ENSG00000155368.16 TPM= 141.28 Transcript Type= protein_coding
chr2	119431869	119438520	119431869	119438520	+	ENST00000306406.4@TMEM37	ENST00000306406.4	protein_coding	119431869,119436889	119431924,119438520	Gene ID= ENSG00000171227.6 TPM= 25.69 Transcript Type= protein_coding
chr2	119439843	119524483	119439843	119524483	-	transcript5606.chr2.nic@SCTR	transcript5606.chr2.nic	protein_coding	119524155,119494428,119480689,119478811,119473453,119465789,119464123,119461847,119453287,119452010,119448689,119446759,119441558,119439843	119524483,119494548,119480813,119478918,119473556,119465886,119464255,119462000,119453347,119452079,119448780,119446885,119441599,119440257	Gene ID= ENSG00000080293.9 TPM= 4.67 Transcript Type= NA
chr2	119439843	119524479	119439843	119524479	-	transcript5610.chr2.nnic@SCTR	transcript5610.chr2.nnic	protein_coding	119524155,119494428,119473453,119465789,119464123,119461847,119453287,119452010,119448689,119446759,119441558,119439843	119524479,119494548,119473556,119465886,119464255,119462000,119453347,119452079,119448780,119446885,119441599,119440257	Gene ID= ENSG00000080293.9 TPM= 3.5 Transcript Type= NA
chr2	119439843	119482097	119439843	119482097	-	transcript5614.chr2.nic@SCTR	transcript5614.chr2.nic	protein_coding	119478811,119473453,119465789,119464123,119461847,119453287,119452010,119448689,119446759,119441558,119439843	119482097,119473556,119465886,119464255,119462000,119453347,119452079,119448780,119446885,119441599,119440257	Gene ID= ENSG00000080293.9 TPM= 3.79 Transcript Type= NA
chr2	119439843	119524582	119439843	119524582	-	transcript5619.chr2.nnic@SCTR	transcript5619.chr2.nnic	protein_coding	119524155,119494428,119478811,119473453,119465789,119464123,119461847,119441558,119439843	119524582,119494548,119478918,119473556,119465886,119464255,119462000,119441599,119440257	Gene ID= ENSG00000080293.9 TPM= 3.21 Transcript Type= NA
chr2	119439843	119524494	119439843	119524494	-	ENST00000019103.7@SCTR	ENST00000019103.7	protein_coding	119524155,119494428,119478811,119473453,119465789,119464123,119461847,119453287,119452010,119448689,119446759,119441558,119439843	119524494,119494548,119478918,119473556,119465886,119464255,119462000,119453347,119452079,119448780,119446885,119441599,119440257	Gene ID= ENSG00000080293.9 TPM= 18.68 Transcript Type= protein_coding
chr2	119544471	119656661	119544471	119656661	+	ENST00000413369.7@CFAP221	ENST00000413369.7	protein_coding	119544471,119546085,119549085,119559689,119559928,119562014,119587119,119601218,119604672,119604876,119605181,119608502,119611653,119615611,119625583,119627653,119629875,119630570,119630767,119638259,119639781,119646958,119651974,119656362	119544510,119546270,119549185,119559775,119560026,119562114,119587222,119601377,119604792,119604987,119605289,119608589,119611742,119615709,119625688,119627786,119629955,119630677,119630901,119638417,119639872,119647050,119652069,119656661	Gene ID= ENSG00000163075.12 TPM= 1.17 Transcript Type= protein_coding
chr2	119679167	119682118	119679167	119682118	+	ENST00000401466.5@TMEM177	ENST00000401466.5	protein_coding	119679167,119680832	119679225,119682118	Gene ID= ENSG00000144120.12 TPM= 3.89 Transcript Type= protein_coding
chr2	119679170	119682118	119679170	119682118	+	ENST00000272521.6@TMEM177	ENST00000272521.6	protein_coding	119679170,119680832	119679276,119682118	Gene ID= ENSG00000144120.12 TPM= 3.89 Transcript Type= protein_coding
chr2	119679167	119682118	119679167	119682118	+	ENST00000424086.5@TMEM177	ENST00000424086.5	protein_coding	119679167,119680832	119679617,119682118	Gene ID= ENSG00000144120.12 TPM= 1.55 Transcript Type= protein_coding
chr2	119682128	119684368	119682128	119684368	-	transcript5643.chr2.nnic@NA	transcript5643.chr2.nnic	NA	119682128	119684368	Gene ID= novel_gene_chr2_5644 TPM= 2.34 Transcript Type= NA
chr2	119759631	119983818	119759631	119983818	+	ENST00000263708.6@PTPN4	ENST00000263708.6	protein_coding	119759631,119809837,119862536,119877323,119877464,119881786,119882097,119882503,119885795,119900718,119915179,119920069,119926598,119932424,119934800,119945081,119946341,119946518,119951973,119955157,119956844,119957016,119960807,119962616,119965497,119967837,119976984	119760384,119809991,119862643,119877365,119877542,119881830,119882149,119882623,119885882,119900806,119915242,119920241,119926666,119932549,119934958,119945240,119946424,119946574,119952129,119955323,119956934,119957077,119960953,119962744,119965645,119967972,119983818	Gene ID= ENSG00000088179.8 TPM= 5.84 Transcript Type= protein_coding
chr2	120013005	120179119	120013005	120179119	+	ENST00000263713.9@EPB41L5	ENST00000263713.9	protein_coding	120013005,120019077,120042006,120073178,120074100,120075476,120075701,120076971,120077229,120078493,120087171,120090347,120091555,120093249,120100244,120100699,120127688,120131618,120143003,120146225,120160881,120164836,120167466,120167877,120174841	120013210,120019264,120042110,120073220,120074178,120075520,120075753,120077091,120077316,120078581,120087240,120090516,120091661,120093276,120100286,120100814,120127851,120131715,120143131,120146289,120160974,120164910,120167507,120168007,120179119	Gene ID= ENSG00000115109.13 TPM= 10.51 Transcript Type= protein_coding
chr2	120046506	120054339	120046506	120054339	-	transcript5664.chr2.nnic@NA	transcript5664.chr2.nnic	NA	120046506	120054339	Gene ID= novel_gene_chr2_5665 TPM= 2.34 Transcript Type= NA
chr2	120110637	120112068	120110637	120112068	-	transcript5666.chr2.nnic@NA	transcript5666.chr2.nnic	NA	120110637	120112068	Gene ID= novel_gene_chr2_5667 TPM= 4.67 Transcript Type= NA
chr2	120217478	120223444	120217478	120223444	-	transcript5672.chr2.nnic@NA	transcript5672.chr2.nnic	NA	120217478	120223444	Gene ID= novel_gene_chr2_5673 TPM= 17.51 Transcript Type= NA
chr2	120221278	120223408	120221278	120223408	-	ENST00000426077.2@TMEM185B	ENST00000426077.2	protein_coding	120221278	120223408	Gene ID= ENSG00000226479.3 TPM= 7.01 Transcript Type= protein_coding
chr2	120252758	120294713	120252758	120294713	+	ENST00000272519.9@RALB	ENST00000272519.9	protein_coding	120252758,120278618,120285874,120289580,120293141	120252980,120278778,120286082,120289757,120294713	Gene ID= ENSG00000144118.13 TPM= 311.36 Transcript Type= protein_coding
chr2	120346143	120351808	120346143	120351808	+	ENST00000295228.3@INHBB	ENST00000295228.3	protein_coding	120346143,120349099	120346636,120351808	Gene ID= ENSG00000163083.5 TPM= 3.5 Transcript Type= protein_coding
chr2	120989452	120992497	120989452	120992497	+	transcript5692.chr2.nnic@NA	transcript5692.chr2.nnic	NA	120989452	120992497	Gene ID= novel_gene_chr2_5693 TPM= 2.34 Transcript Type= NA
chr2	121216587	121285207	121216587	121285207	-	ENST00000263707.5@TFCP2L1	ENST00000263707.5	protein_coding	121285048,121281120,121249571,121248982,121248164,121246818,121242359,121239558,121237802,121237623,121235221,121234091,121231826,121225562,121216587	121285207,121281271,121249647,121249087,121248270,121246970,121242469,121239649,121237850,121237716,121235311,121234194,121231968,121225613,121224387	Gene ID= ENSG00000115112.7 TPM= 18.68 Transcript Type= protein_coding
chr2	121337776	121649476	121337776	121649476	-	ENST00000541377.5@CLASP1	ENST00000541377.5	protein_coding	121649372,121605701,121530247,121528677,121527799,121525845,121515665,121503167,121469808,121462532,121461101,121459980,121458840,121457687,121451790,121450913,121448953,121448276,121447337,121445449,121430073,121425139,121410866,121409024,121407471,121404371,121401868,121401509,121398322,121397140,121387763,121387122,121377499,121367588,121365094,121363172,121348512,121347038,121337776	121649476,121606180,121530325,121528780,121527890,121525920,121515762,121503234,121469960,121462605,121461193,121460125,121458975,121457757,121451849,121450990,121449120,121448325,121447507,121445496,121430177,121425306,121410969,121409047,121407712,121404434,121401870,121401672,121398400,121397283,121387906,121387228,121377649,121367831,121365284,121363300,121348718,121347154,121340947	Gene ID= ENSG00000074054.17 TPM= 66.55 Transcript Type= protein_coding
chr2	121726945	121736923	121726945	121736923	-	ENST00000285814.8@NIFK	ENST00000285814.8	protein_coding	121736746,121735613,121732096,121730893,121728477,121728288,121726945	121736923,121735750,121732204,121731104,121728536,121728356,121727912	Gene ID= ENSG00000155438.11 TPM= 4.67 Transcript Type= protein_coding
chr2	121755533	121767853	121755533	121767853	+	ENST00000389682.7@TSN	ENST00000389682.7	protein_coding	121755533,121757240,121758710,121761409,121763005,121765134	121755845,121757333,121758806,121761524,121763084,121767853	Gene ID= ENSG00000211460.11 TPM= 33.28 Transcript Type= protein_coding
chr2	121755545	121767853	121755545	121767853	+	ENST00000536142.5@TSN	ENST00000536142.5	protein_coding	121755545,121757240,121758710,121761409,121765134	121755845,121757333,121758806,121761524,121767853	Gene ID= ENSG00000211460.11 TPM= 1.75 Transcript Type= protein_coding
chr2	121755659	121767294	121755659	121767294	+	ENST00000467324.5@TSN	ENST00000467324.5	protein_coding	121755659,121757240,121758710,121761409,121763005,121765134	121755953,121757333,121758806,121761524,121763084,121767294	Gene ID= ENSG00000211460.11 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr2	126655933	126696670	126655933	126696670	+	ENST00000259254.8@GYPC	ENST00000259254.8	protein_coding	126655933,126690255,126693864,126695946	126656312,126690311,126693947,126696670	Gene ID= ENSG00000136732.14 TPM= 99.25 Transcript Type= protein_coding
chr2	126656184	126696664	126656184	126696664	+	ENST00000409836.3@GYPC	ENST00000409836.3	protein_coding	126656184,126693864,126695946	126656312,126693947,126696664	Gene ID= ENSG00000136732.14 TPM= 15.18 Transcript Type= protein_coding
chr2	126659782	126663268	126659782	126663268	-	transcript5726.chr2.nnic@NA	transcript5726.chr2.nnic	NA	126659782	126663268	Gene ID= novel_gene_chr2_5727 TPM= 3.5 Transcript Type= NA
chr2	127048033	127081870	127048033	127081870	-	transcript5728.chr2.nnic@BIN1	transcript5728.chr2.nnic	protein_coding	127081832,127076626,127070762,127070553,127069995,127068924,127063933,127063571,127062115,127059011,127057473,127051154,127050802,127050421,127048033	127081870,127076706,127070816,127070647,127070090,127069031,127064018,127063646,127062197,127059155,127057601,127051243,127050912,127050522,127048633	Gene ID= ENSG00000136717.14 TPM= 7.86 Transcript Type= NA
chr2	127048033	127107150	127048033	127107150	-	transcript5734.chr2.nnic@BIN1	transcript5734.chr2.nnic	protein_coding	127106860,127076626,127070762,127070553,127069995,127068924,127063933,127063571,127062115,127059011,127057473,127050802,127050421,127048033	127107150,127076706,127070816,127070647,127070090,127069031,127064018,127063646,127062197,127059155,127057601,127050912,127050522,127048633	Gene ID= ENSG00000136717.14 TPM= 4.94 Transcript Type= NA
chr2	127048033	127107150	127048033	127107150	-	transcript5737.chr2.nnic@BIN1	transcript5737.chr2.nnic	protein_coding	127106860,127076626,127070762,127070553,127069995,127068924,127063933,127063571,127062115,127059011,127050421,127048033	127107150,127076706,127070816,127070647,127070090,127069031,127064018,127063646,127062197,127059155,127050522,127048633	Gene ID= ENSG00000136717.14 TPM= 3.39 Transcript Type= NA
chr2	127048027	127107288	127048027	127107288	-	ENST00000393040.7@BIN1	ENST00000393040.7	protein_coding	127106860,127076626,127070762,127070553,127069995,127068924,127063933,127063571,127062115,127059011,127057473,127051154,127050802,127050421,127048027	127107288,127076706,127070816,127070647,127070090,127069031,127064018,127063646,127062197,127059155,127057601,127051243,127050912,127050522,127048633	Gene ID= ENSG00000136717.14 TPM= 38.8 Transcript Type= protein_coding
chr2	127048038	127107278	127048038	127107278	-	ENST00000409400.1@BIN1	ENST00000409400.1	protein_coding	127106860,127076626,127070762,127070553,127069995,127068924,127063933,127063571,127062115,127059011,127051154,127050802,127050421,127048038	127107278,127076706,127070816,127070647,127070090,127069031,127064018,127063646,127062197,127059155,127051243,127050912,127050522,127048633	Gene ID= ENSG00000136717.14 TPM= 44.25 Transcript Type= protein_coding
chr2	127106197	127107747	127106197	127107747	+	transcript5740.chr2.nnic@NA	transcript5740.chr2.nnic	NA	127106197	127107747	Gene ID= novel_gene_chr2_5741 TPM= 2.34 Transcript Type= NA
chr2	127257290	127294145	127257290	127294145	-	ENST00000426778.5@ERCC3	ENST00000426778.5	protein_coding	127293857,127293513,127292610,127290224,127289689,127289337,127288660,127286703,127280447,127279173,127272865,127271336,127261228,127259296,127257290	127294145,127293718,127292846,127290273,127289824,127289501,127288864,127287017,127280631,127279375,127272961,127271453,127261346,127259448,127257727	Gene ID= ENSG00000163161.12 TPM= 2.72 Transcript Type= nonsense_mediated_decay
chr2	127257290	127294176	127257290	127294176	-	ENST00000285398.6@ERCC3	ENST00000285398.6	protein_coding	127294054,127293513,127292610,127290224,127289689,127289337,127288660,127286703,127280447,127279173,127272865,127271336,127261228,127259296,127257290	127294176,127293718,127292846,127290273,127289824,127289501,127288864,127287017,127280631,127279375,127272961,127271453,127261346,127259448,127257727	Gene ID= ENSG00000163161.12 TPM= 64.6 Transcript Type= protein_coding
chr2	127257290	127294177	127257290	127294177	-	transcript5746.chr2.nic@ERCC3	transcript5746.chr2.nic	protein_coding	127294054,127293513,127292610,127289689,127289337,127288660,127286703,127280447,127279173,127272865,127271336,127261228,127259296,127257290	127294177,127293718,127292704,127290273,127289501,127288864,127287017,127280631,127279375,127272961,127271453,127261346,127259448,127257727	Gene ID= ENSG00000163161.12 TPM= 5.06 Transcript Type= NA
chr2	127257290	127294177	127257290	127294177	-	transcript5749.chr2.nic@ERCC3	transcript5749.chr2.nic	protein_coding	127294054,127293513,127292610,127290224,127289337,127288660,127286703,127280447,127279173,127272865,127271336,127261228,127259296,127257290	127294177,127293718,127292704,127290273,127289824,127288864,127287017,127280631,127279375,127272961,127271453,127261346,127259448,127257727	Gene ID= ENSG00000163161.12 TPM= 3.5 Transcript Type= NA
chr2	127298673	127305233	127298673	127305233	-	transcript5765.chr2.nnic@NA	transcript5765.chr2.nnic	NA	127298673	127305233	Gene ID= novel_gene_chr2_5766 TPM= 14.01 Transcript Type= NA
chr2	127305931	127387981	127305931	127387981	-	transcript5756.chr2.nnic@MAP3K2	transcript5756.chr2.nnic	protein_coding	127387452,127385505,127343126,127338932,127337738,127335870,127330392,127329921,127326687,127325728,127324174,127323902,127322046,127318169,127317629,127314754,127308585,127305931	127387981,127385573,127343194,127339050,127337778,127335969,127330505,127330008,127326817,127325807,127324241,127323994,127322252,127318317,127317760,127314883,127308762,127307804	Gene ID= ENSG00000169967.16 TPM= 9.34 Transcript Type= NA
chr2	127305931	127388097	127305931	127388097	-	transcript5760.chr2.nic@MAP3K2	transcript5760.chr2.nic	protein_coding	127387452,127343126,127338932,127337738,127335870,127330392,127329921,127326687,127325728,127324174,127323902,127322046,127318169,127317629,127314754,127308585,127305931	127388097,127343194,127339050,127337778,127335969,127330505,127330008,127326817,127325807,127324241,127323994,127322252,127318317,127317760,127314883,127308762,127307804	Gene ID= ENSG00000169967.16 TPM= 96.91 Transcript Type= NA
chr2	127418427	127429246	127418427	127429246	+	ENST00000234071.7@PROC	ENST00000234071.7	protein_coding	127418427,127419922,127421283,127422917,127423034,127423274,127426085,127427105,127428357	127418492,127420012,127421449,127422941,127423171,127423408,127426227,127427222,127429246	Gene ID= ENSG00000115718.17 TPM= 1.17 Transcript Type= protein_coding
chr2	127480806	127526477	127480806	127526477	-	transcript5769.chr2.nnic@IWS1	transcript5769.chr2.nnic	protein_coding	127526175,127523676,127504684,127503387,127502815,127498140,127495998,127494872,127493281,127491971,127489818,127489179,127486553,127480806	127526477,127523791,127505752,127503576,127502872,127498237,127496148,127494954,127493410,127492088,127489943,127489235,127486664,127481175	Gene ID= ENSG00000163166.14 TPM= 4.67 Transcript Type= NA
chr2	127480806	127526468	127480806	127526468	-	ENST00000295321.8@IWS1	ENST00000295321.8	protein_coding	127526175,127523676,127504684,127503387,127502815,127498140,127495998,127494872,127493281,127491971,127489832,127489179,127486553,127480806	127526468,127523791,127505752,127503576,127502872,127498237,127496148,127494954,127493410,127492088,127489943,127489235,127486664,127481175	Gene ID= ENSG00000163166.14 TPM= 56.04 Transcript Type= protein_coding
chr2	127638428	127681786	127638428	127681786	-	ENST00000410011.5@LIMS2	ENST00000410011.5	protein_coding	127681320,127657403,127654830,127654424,127642923,127642049,127640896,127640270,127640070,127638428	127681786,127657562,127654896,127654544,127643072,127642199,127640988,127640318,127640145,127639428	Gene ID= ENSG00000072163.19 TPM= 27.74 Transcript Type= protein_coding
chr2	127638426	127675149	127638426	127675149	-	transcript5802.chr2.nnic@LIMS2	transcript5802.chr2.nnic	protein_coding	127675014,127654830,127654424,127642923,127642049,127640896,127640270,127640070,127638426	127675149,127654896,127654544,127643072,127642199,127640988,127640318,127640145,127639428	Gene ID= ENSG00000072163.19 TPM= 23.89 Transcript Type= NA
chr2	127638428	127675190	127638428	127675190	-	ENST00000355119.8@LIMS2	ENST00000355119.8	protein_coding	127675014,127657403,127654830,127654424,127642923,127642049,127640896,127640270,127640070,127638428	127675190,127657562,127654896,127654544,127643072,127642199,127640988,127640318,127640145,127639428	Gene ID= ENSG00000072163.19 TPM= 237.91 Transcript Type= protein_coding
chr2	127638426	127664546	127638426	127664546	-	ENST00000324938.9@LIMS2	ENST00000324938.9	protein_coding	127664306,127657403,127654830,127654424,127642923,127642049,127640896,127640270,127640070,127638426	127664546,127657562,127654896,127654544,127643072,127642199,127640988,127640318,127640145,127639428	Gene ID= ENSG00000072163.19 TPM= 23.31 Transcript Type= protein_coding
chr2	127638426	127643228	127638426	127643228	-	ENST00000409286.5@LIMS2	ENST00000409286.5	protein_coding	127642923,127642049,127640896,127640270,127640070,127638426	127643228,127642199,127640988,127640318,127640145,127639428	Gene ID= ENSG00000072163.19 TPM= 11.75 Transcript Type= protein_coding
chr2	127669755	127671444	127669755	127671444	+	transcript5825.chr2.nnic@NA	transcript5825.chr2.nnic	NA	127669755	127671444	Gene ID= novel_gene_chr2_5826 TPM= 9.34 Transcript Type= NA
chr2	127701022	127811147	127701022	127811147	-	ENST00000322313.8@WDR33	ENST00000322313.8	protein_coding	127811012,127770778,127768933,127768189,127765174,127764828,127763062,127726651,127725061,127724887,127724333,127723253,127722958,127722591,127721836,127719265,127717155,127713583,127709693,127709490,127708677,127701022	127811147,127771004,127769001,127768293,127765269,127764979,127763159,127726777,127725215,127724965,127724443,127723347,127723044,127722730,127721988,127720353,127717263,127714021,127709856,127709582,127708892,127706552	Gene ID= ENSG00000136709.11 TPM= 19.85 Transcript Type= protein_coding
chr2	127843553	127858155	127843553	127858155	-	transcript5848.chr2.nnic@POLR2D	transcript5848.chr2.nnic	protein_coding	127858028,127852925,127850590,127846230,127843553	127858155,127853105,127850685,127848185,127844735	Gene ID= ENSG00000144231.10 TPM= 2.34 Transcript Type= NA
chr2	127843551	127858157	127843551	127858157	-	ENST00000272645.8@POLR2D	ENST00000272645.8	protein_coding	127858028,127852925,127850590,127843551	127858157,127853105,127850685,127848185	Gene ID= ENSG00000144231.10 TPM= 12.84 Transcript Type= protein_coding
chr2	127845374	127858148	127845374	127858148	-	transcript5860.chr2.nnic@POLR2D	transcript5860.chr2.nnic	protein_coding	127858028,127850590,127845374	127858148,127850685,127848185	Gene ID= ENSG00000144231.10 TPM= 7.01 Transcript Type= NA
chr2	127846699	127858117	127846699	127858117	-	ENST00000409955.1@POLR2D	ENST00000409955.1	protein_coding	127858028,127852925,127846699	127858117,127853105,127848185	Gene ID= ENSG00000144231.10 TPM= 4.67 Transcript Type= protein_coding
chr2	127852982	127856307	127852982	127856307	+	transcript5868.chr2.nnic@NA	transcript5868.chr2.nnic	NA	127852982	127856307	Gene ID= novel_gene_chr2_5869 TPM= 5.84 Transcript Type= NA
chr2	127861630	127885922	127861630	127885922	-	ENST00000272647.9@AMMECR1L	ENST00000272647.9	protein_coding	127885810,127884203,127873828,127871249,127870814,127869454,127866900,127861630	127885922,127884312,127874272,127871359,127870928,127869544,127866996,127865205	Gene ID= ENSG00000144233.9 TPM= 11.68 Transcript Type= protein_coding
chr2	127941568	128028093	127941568	128028093	-	transcript5876.chr2.nic@SAP130	transcript5876.chr2.nic	protein_coding	128027940,128026181,128017680,128016389,128014803,128013030,128010269,128000307,128000056,127999741,127996350,127993187,127989564,127986785,127977985,127954986,127950160,127949869,127945456,127942424,127941568	128028093,128026298,128017915,128016472,128014914,128013154,128010393,128000454,128000146,127999845,127996491,127993308,127989866,127986962,127978089,127955344,127950408,127949994,127945559,127942537,127942164	Gene ID= ENSG00000136715.17 TPM= 2.34 Transcript Type= NA
chr2	127941224	128028120	127941224	128028120	-	ENST00000259234.10@SAP130	ENST00000259234.10	protein_coding	128027940,128026181,128017680,128016389,128014803,128013030,128010269,128000307,128000056,127999741,127996350,127993187,127989564,127986785,127977985,127954986,127950160,127949869,127945456,127942424,127941224	128028120,128026298,128017915,128016547,128014914,128013154,128010393,128000454,128000146,127999845,127996491,127993308,127989866,127986959,127978089,127955344,127950408,127949994,127945559,127942537,127942164	Gene ID= ENSG00000136715.17 TPM= 3.5 Transcript Type= protein_coding
chr2	128091311	128195677	128091311	128195677	+	ENST00000259253.10@UGGT1	ENST00000259253.10	protein_coding	128091311,128097429,128103932,128107938,128109634,128113084,128115124,128116265,128120356,128121199,128123186,128127361,128129029,128133141,128134876,128138717,128143094,128145803,128152784,128155489,128156392,128157252,128159514,128160460,128161138,128164730,128170288,128171205,128172573,128173781,128174773,128176814,128177832,128178468,128179786,128180890,128182130,128183675,128186683,128187449,128189717	128091415,128097564,128104014,128108068,128109746,128113258,128115220,128116343,128120456,128121298,128123246,128127452,128129179,128133260,128134961,128138852,128143225,128145967,128152904,128155587,128156415,128157346,128159720,128160591,128161268,128164825,128170390,128171284,128172762,128173939,128174858,128176898,128177920,128178569,128179870,128181072,128182290,128183789,128186799,128187614,128195677	Gene ID= ENSG00000136731.12 TPM= 12.84 Transcript Type= protein_coding
chr2	128265480	128318577	128265480	128318577	-	ENST00000259241.6@HS6ST1	ENST00000259241.6	protein_coding	128318037,128265480	128318577,128268870	Gene ID= ENSG00000136720.6 TPM= 87.57 Transcript Type= protein_coding
chr2	130139287	130145079	130139287	130145079	-	ENST00000409943.7@CCDC74B	ENST00000409943.7	protein_coding	130144747,130143269,130142133,130141158,130140179,130140023,130139891,130139287	130145079,130143313,130142183,130141296,130140371,130140096,130139947,130139690	Gene ID= ENSG00000152076.18 TPM= 1.17 Transcript Type= protein_coding
chr2	130151408	130160665	130151408	130160665	-	transcript5892.chr2.nic@SMPD4	transcript5892.chr2.nic	protein_coding	130157251,130156585,130156035,130155096,130154277,130153702,130153319,130153043,130151408	130160665,130156675,130156135,130155259,130154482,130153935,130153450,130153171,130152884	Gene ID= ENSG00000136699.19 TPM= 9.34 Transcript Type= NA
chr2	130151408	130181601	130151408	130181601	-	ENST00000351288.10@SMPD4	ENST00000351288.10	protein_coding	130181530,130176554,130174914,130173514,130173279,130172787,130172625,130172349,130167458,130164374,130157251,130156585,130156035,130155096,130154277,130153702,130153319,130153043,130151408	130181601,130176637,130175000,130173656,130173354,130172895,130172677,130172500,130167590,130164445,130157396,130156675,130156135,130155259,130154482,130153935,130153450,130153171,130152884	Gene ID= ENSG00000136699.19 TPM= 23.35 Transcript Type= protein_coding
chr2	130181737	130190713	130181737	130190713	+	ENST00000425361.5@MZT2B	ENST00000425361.5	protein_coding	130181737,130182627,130190469	130181797,130182775,130190713	Gene ID= ENSG00000152082.13 TPM= 9.92 Transcript Type= protein_coding
chr2	130181772	130190695	130181772	130190695	+	ENST00000457492.5@MZT2B	ENST00000457492.5	protein_coding	130181772,130182627,130190469	130181830,130182775,130190695	Gene ID= ENSG00000152082.13 TPM= 1.75 Transcript Type= protein_coding
chr2	130182313	130190729	130182313	130190729	+	ENST00000455239.1@MZT2B	ENST00000455239.1	protein_coding	130182313,130190469	130182452,130190729	Gene ID= ENSG00000152082.13 TPM= 11.68 Transcript Type= protein_coding
chr2	130338241	130342166	130338241	130342166	-	transcript5927.chr2.nnic@CCDC115	transcript5927.chr2.nnic	protein_coding	130342039,130341841,130341667,130340908,130338241	130342166,130341944,130341749,130341039,130339232	Gene ID= ENSG00000136710.9 TPM= 22.18 Transcript Type= NA
chr2	130342225	130346624	130342225	130346624	+	ENST00000259239.7@IMP4	ENST00000259239.7	protein_coding	130342225,130343086,130344629,130345376,130345567,130345779,130346018,130346201,130346356	130342935,130343194,130344712,130345485,130345699,130345933,130346112,130346274,130346624	Gene ID= ENSG00000136718.9 TPM= 42.03 Transcript Type= protein_coding
chr2	130342922	130347810	130342922	130347810	+	ENST00000460766.5@IMP4	ENST00000460766.5	protein_coding	130342922,130344629,130345376,130345567,130345779,130346018,130346201,130346356	130343194,130344712,130345485,130345699,130345933,130346112,130346274,130347810	Gene ID= ENSG00000136718.9 TPM= 16.35 Transcript Type= retained_intron
chr2	130356034	130375405	130356034	130375405	+	transcript5899.chr2.nic@PTPN18	transcript5899.chr2.nic	protein_coding	130356034,130358867,130359233,130359397,130359608,130369133,130369765,130370048,130370557,130370705,130370875,130371199,130372257,130372873,130373157,130374666	130356200,130358975,130359309,130359492,130359646,130369201,130369827,130370190,130370623,130370782,130370964,130371287,130372483,130372947,130373220,130375405	Gene ID= ENSG00000072135.12 TPM= 9.34 Transcript Type= NA
chr2	130356007	130375409	130356007	130375409	+	ENST00000175756.9@PTPN18	ENST00000175756.9	protein_coding	130356007,130358867,130359233,130359397,130359608,130369133,130369765,130370048,130370557,130370705,130370875,130371199,130372257,130372873,130373157	130356200,130358975,130359309,130359492,130359646,130369201,130369827,130370190,130370623,130370782,130370964,130371287,130372483,130372947,130375409	Gene ID= ENSG00000072135.12 TPM= 23.35 Transcript Type= protein_coding
chr2	130356045	130374571	130356045	130374571	+	ENST00000347849.7@PTPN18	ENST00000347849.7	protein_coding	130356045,130369133,130369765,130370048,130370557,130370705,130370875,130371199,130372257,130372873,130373157	130356200,130369201,130369827,130370190,130370623,130370782,130370964,130371287,130372483,130372947,130374571	Gene ID= ENSG00000072135.12 TPM= 7.01 Transcript Type= protein_coding
chr2	130356034	130362687	130356034	130362687	+	transcript5921.chr2.nic@PTPN18	transcript5921.chr2.nic	protein_coding	130356034,130358867,130359233,130359397,130359608,130362156	130356200,130358975,130359309,130359492,130359646,130362687	Gene ID= ENSG00000072135.12 TPM= 2.34 Transcript Type= NA
chr2	130416750	130428524	130416750	130428524	-	transcript5940.chr2.nnic@FAR2P2	transcript5940.chr2.nnic	transcribed_unprocessed_pseudogene	130427704,130426166,130425091,130416750	130428524,130426263,130425158,130419245	Gene ID= ENSG00000178162.8 TPM= 2.34 Transcript Type= NA
chr2	130416750	130428524	130416750	130428524	-	transcript5942.chr2.nic@FAR2P2	transcript5942.chr2.nic	transcribed_unprocessed_pseudogene	130427704,130425091,130416750	130428524,130425158,130419245	Gene ID= ENSG00000178162.8 TPM= 2.34 Transcript Type= NA
chr2	131034972	131047253	131034972	131047253	+	transcript5944.chr2.nnic@ARHGEF4	transcript5944.chr2.nnic	protein_coding	131034972,131035704,131038853,131040016,131040261,131041230,131041815,131043452,131044299,131045369,131046038	131035288,131035836,131039032,131040192,131040440,131041462,131041944,131043583,131044542,131045446,131047253	Gene ID= ENSG00000136002.18 TPM= 14.01 Transcript Type= NA
chr2	131034184	131047253	131034184	131047253	+	transcript5947.chr2.nic@ARHGEF4	transcript5947.chr2.nic	protein_coding	131034184,131038853,131040016,131040261,131041230,131041815,131043452,131044299,131045369,131046038	131035288,131039032,131040192,131040440,131041462,131041944,131043583,131044542,131045446,131047253	Gene ID= ENSG00000136002.18 TPM= 23.35 Transcript Type= NA
chr2	131047876	131093428	131047876	131093428	-	ENST00000409185.5@FAM168B	ENST00000409185.5	protein_coding	131093332,131082577,131071855,131055553,131055272,131052891,131047876	131093428,131082657,131071938,131055695,131055449,131053015,131052452	Gene ID= ENSG00000152102.17 TPM= 74.73 Transcript Type= protein_coding
chr2	131104847	131149851	131104847	131149851	+	ENST00000403716.5@PLEKHB2	ENST00000403716.5	protein_coding	131104847,131120934,131125753,131126684,131130721,131132902,131140167,131144408,131146637	131105398,131120978,131125905,131126786,131130760,131132991,131140275,131144449,131149851	Gene ID= ENSG00000115762.16 TPM= 23.35 Transcript Type= protein_coding
chr2	131104944	131149852	131104944	131149852	+	ENST00000234115.10@PLEKHB2	ENST00000234115.10	protein_coding	131104944,131120934,131125753,131126684,131130721,131132902,131140170,131146637	131105398,131120978,131125905,131126786,131130760,131132991,131140275,131149852	Gene ID= ENSG00000115762.16 TPM= 200.83 Transcript Type= protein_coding
chr2	131104847	131149851	131104847	131149851	+	ENST00000439822.6@PLEKHB2	ENST00000439822.6	protein_coding	131104847,131120934,131125753,131126684,131140167,131146637	131105398,131120978,131125905,131126786,131140275,131149851	Gene ID= ENSG00000115762.16 TPM= 10.51 Transcript Type= protein_coding
chr2	131110319	131116240	131110319	131116240	-	transcript5980.chr2.nnic@NA	transcript5980.chr2.nnic	NA	131110319	131116240	Gene ID= novel_gene_chr2_5981 TPM= 3.5 Transcript Type= NA
chr2	131483960	131492422	131483960	131492422	-	ENST00000309451.6@MZT2A	ENST00000309451.6	protein_coding	131492207,131491876,131483960	131492422,131492024,131484218	Gene ID= ENSG00000173272.15 TPM= 33.86 Transcript Type= protein_coding
chr2	131489203	131492233	131489203	131492233	-	transcript5998.chr2.nnic@NA	transcript5998.chr2.nnic	NA	131489203	131492233	Gene ID= novel_gene_chr2_5999 TPM= 3.5 Transcript Type= NA
chr2	131492813	131521573	131492813	131521573	+	ENST00000438378.2@AC073869.1	ENST00000438378.2	transcribed_processed_pseudogene	131492813,131497210,131498867,131500204,131500506,131500962,131501181,131501358,131506312,131508537,131515602,131516314,131516857,131517727,131518503,131519050,131519535,131520097	131493140,131497293,131498953,131500346,131500581,131501070,131501233,131501508,131506442,131508608,131515747,131516404,131516957,131517890,131518708,131519283,131519666,131521573	Gene ID= ENSG00000152117.17 TPM= 16.35 Transcript Type= processed_transcript
chr2	131527833	131533666	131527833	131533666	+	ENST00000295171.10@CCDC74A	ENST00000295171.10	protein_coding	131527833,131529647,131530579,131531664,131532589,131532864,131533013,131533269	131528220,131529691,131530827,131531802,131532781,131532937,131533069,131533666	Gene ID= ENSG00000163040.14 TPM= 2.92 Transcript Type= protein_coding
chr2	131527880	131533666	131527880	131533666	+	ENST00000409856.7@CCDC74A	ENST00000409856.7	protein_coding	131527880,131529647,131530777,131531664,131532589,131532864,131533013,131533269	131528220,131529691,131530827,131531802,131532781,131532937,131533069,131533666	Gene ID= ENSG00000163040.14 TPM= 2.92 Transcript Type= protein_coding
chr2	131682487	131699640	131682487	131699640	+	transcript6009.chr2.nnic@NA	transcript6009.chr2.nnic	NA	131682487,131684709,131686064,131686330,131688166,131696869	131682988,131684819,131686211,131686441,131688303,131699640	Gene ID= novel_gene_chr2_6010 TPM= 3.5 Transcript Type= NA
chr2	132644853	132670205	132644853	132670205	-	ENST00000397463.2@LYPD1	ENST00000397463.2	protein_coding	132669881,132668400,132644853	132670205,132668537,132646280	Gene ID= ENSG00000150551.10 TPM= 1.17 Transcript Type= protein_coding
chr2	132645101	132648491	132645101	132648491	+	transcript6016.chr2.nnic@NA	transcript6016.chr2.nnic	NA	132645101	132648491	Gene ID= novel_gene_chr2_6017 TPM= 8.17 Transcript Type= NA
chr2	132782167	133421821	132782167	133421821	-	transcript6021.chr2.nnic@NCKAP5	transcript6021.chr2.nnic	protein_coding	133421675,133303037,133213716,133129978,132994152,132963720,132878848,132868936,132860492,132796628,132790023,132782167	133421821,133303110,133213779,133130111,132994239,132963869,132878916,132868974,132860611,132796729,132790205,132785718	Gene ID= ENSG00000176771.16 TPM= 8.76 Transcript Type= NA
chr2	132855777	133421821	132855777	133421821	-	transcript6025.chr2.nnic@NCKAP5	transcript6025.chr2.nnic	protein_coding	133421675,133303037,133213716,133129978,132994152,132963720,132878848,132868936,132855777	133421821,133303110,133213779,133130111,132994239,132963869,132878916,132868974,132860611	Gene ID= ENSG00000176771.16 TPM= 3.5 Transcript Type= NA
chr2	132864214	133421821	132864214	133421821	-	transcript6026.chr2.nnic@NCKAP5	transcript6026.chr2.nnic	protein_coding	133421675,133303037,133213716,133129978,132994152,132963720,132878848,132864214	133421821,133303110,133213779,133130111,132994239,132963869,132878916,132868974	Gene ID= ENSG00000176771.16 TPM= 2.34 Transcript Type= NA
chr2	132671799	133568460	132671799	133568460	-	ENST00000409261.5@NCKAP5	ENST00000409261.5	protein_coding	133568216,133559050,133517458,133303037,133213716,133129978,132994152,132963720,132878848,132868936,132860492,132796628,132790023,132781940,132781052,132773816,132731737,132728816,132725627,132671799	133568460,133559117,133517587,133303110,133213779,133130111,132994239,132963869,132878916,132868974,132860611,132796729,132790205,132785718,132781229,132773894,132732051,132728952,132725759,132673305	Gene ID= ENSG00000176771.16 TPM= 7.59 Transcript Type= protein_coding
chr2	133411602	133417137	133411602	133417137	+	transcript6042.chr2.nnic@NA	transcript6042.chr2.nnic	NA	133411602	133417137	Gene ID= novel_gene_chr2_6043 TPM= 2.34 Transcript Type= NA
chr2	134455759	134719000	134455759	134719000	-	ENST00000281924.6@TMEM163	ENST00000281924.6	protein_coding	134718734,134713200,134552048,134550570,134502901,134466114,134458032,134455759	134719000,134713319,134552091,134550661,134502997,134466225,134458173,134456776	Gene ID= ENSG00000152128.13 TPM= 36.2 Transcript Type= protein_coding
chr2	134455760	134459274	134455760	134459274	-	ENST00000467316.1@TMEM163	ENST00000467316.1	protein_coding	134458032,134455760	134459274,134456776	Gene ID= ENSG00000152128.13 TPM= 3.5 Transcript Type= retained_intron
chr2	134691168	134693628	134691168	134693628	+	transcript6049.chr2.nnic@NA	transcript6049.chr2.nnic	NA	134691168	134693628	Gene ID= novel_gene_chr2_6050 TPM= 3.5 Transcript Type= NA
chr2	134918784	134957403	134918784	134957403	+	transcript6069.chr2.nic@CCNT2	transcript6069.chr2.nic	protein_coding	134918784,134919810,134936841,134939002,134942612,134946101,134947736,134952641,134953230	134919012,134919891,134936969,134939062,134942674,134946465,134947899,134952711,134957403	Gene ID= ENSG00000082258.12 TPM= 4.09 Transcript Type= NA
chr2	134918784	134957393	134918784	134957393	+	transcript6071.chr2.nic@CCNT2	transcript6071.chr2.nic	protein_coding	134918784,134919810,134936841,134939002,134942612,134946101,134952641,134953230,134954481	134919012,134919891,134936969,134939062,134942674,134947899,134952711,134954379,134957393	Gene ID= ENSG00000082258.12 TPM= 2.92 Transcript Type= NA
chr2	134918235	134956843	134918235	134956843	+	ENST00000419781.5@CCNT2	ENST00000419781.5	protein_coding	134918235,134919810,134936841,134939002,134942612,134945889,134946101,134947736,134952641,134953230	134919012,134919891,134936969,134939062,134942674,134945975,134946465,134947899,134952711,134956843	Gene ID= ENSG00000082258.12 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr2	134918825	134957017	134918825	134957017	+	ENST00000295238.10@CCNT2	ENST00000295238.10	protein_coding	134918825,134919810,134936841,134939002,134942612,134946101,134947736,134952641,134953230,134954481	134919012,134919891,134936969,134939062,134942674,134946146,134947899,134952711,134954379,134957017	Gene ID= ENSG00000082258.12 TPM= 4.67 Transcript Type= protein_coding
chr2	134931264	134936387	134931264	134936387	-	transcript6079.chr2.nnic@NA	transcript6079.chr2.nnic	NA	134931264	134936387	Gene ID= novel_gene_chr2_6080 TPM= 11.68 Transcript Type= NA
chr2	135052265	135170706	135052265	135170706	+	ENST00000264158.12@RAB3GAP1	ENST00000264158.12	protein_coding	135052265,135052430,135058011,135090998,135093615,135113151,135115216,135120819,135124165,135126181,135126583,135129995,135130552,135132895,135133861,135135265,135135564,135150369,135153649,135162555,135162748,135162986,135164594,135168545	135052325,135052485,135058086,135091130,135093693,135113270,135115381,135120918,135124246,135126249,135126656,135130087,135130721,135132984,135134033,135135319,135135932,135150506,135153876,135162651,135162851,135163101,135164696,135170706	Gene ID= ENSG00000115839.17 TPM= 3.5 Transcript Type= protein_coding
chr2	135052298	135169989	135052298	135169989	+	ENST00000442034.5@RAB3GAP1	ENST00000442034.5	protein_coding	135052298,135052430,135058011,135090998,135093615,135113151,135115216,135120819,135124165,135126181,135126583,135129995,135130552,135132895,135133861,135135265,135135564,135150369,135153649,135162555,135162748,135162986,135164594,135167693,135168545	135052325,135052485,135058086,135091130,135093693,135113270,135115381,135120918,135124246,135126249,135126656,135130087,135130721,135132984,135134033,135135319,135135932,135150506,135153876,135162651,135162851,135163101,135164696,135167713,135169989	Gene ID= ENSG00000115839.17 TPM= 4.67 Transcript Type= protein_coding
chr2	135741619	135785055	135741619	135785055	+	ENST00000272638.13@UBXN4	ENST00000272638.13	protein_coding	135741619,135748267,135753539,135754159,135755517,135761818,135769769,135770571,135772420,135776249,135778948,135780183,135782749	135742011,135748369,135753567,135754277,135755691,135761911,135769823,135770735,135772547,135776351,135779079,135780385,135785055	Gene ID= ENSG00000144224.16 TPM= 144.98 Transcript Type= protein_coding
chr2	135741618	135785055	135741618	135785055	+	transcript6106.chr2.nic@UBXN4	transcript6106.chr2.nic	protein_coding	135741618,135748267,135753539,135755517,135761818,135769769,135770571,135772420,135776249,135778948,135780183,135782749	135742011,135748369,135754277,135755691,135761911,135769823,135770735,135772547,135776351,135779079,135780385,135785055	Gene ID= ENSG00000144224.16 TPM= 26.27 Transcript Type= NA
chr2	135741618	135774859	135741618	135774859	+	transcript6113.chr2.nic@UBXN4	transcript6113.chr2.nic	protein_coding	135741618,135748267,135753539,135755517,135761818,135769769,135770571,135772420	135742011,135748369,135754277,135755691,135761911,135769823,135770735,135774859	Gene ID= ENSG00000144224.16 TPM= 5.84 Transcript Type= NA
chr2	135839626	135876426	135839626	135876426	-	ENST00000264156.2@MCM6	ENST00000264156.2	protein_coding	135876259,135872697,135870251,135868611,135866563,135866132,135865013,135862607,135859301,135857897,135856728,135852787,135851402,135848053,135846237,135844545,135839626	135876426,135872843,135870361,135868860,135866728,135866277,135865163,135862748,135859442,135858004,135856883,135852915,135851563,135848188,135846392,135844684,135840951	Gene ID= ENSG00000076003.4 TPM= 1.17 Transcript Type= protein_coding
chr2	135906677	135985551	135906677	135985551	-	transcript6123.chr2.nnic@DARS	transcript6123.chr2.nnic	protein_coding	135985403,135983397,135979274,135961396,135943378,135933910,135924387,135922784,135920453,135916226,135914469,135912486,135911382,135911139,135906677	135985551,135983454,135979366,135961498,135943480,135933990,135924498,135922918,135920600,135916372,135914511,135912566,135911493,135911210,135907407	Gene ID= ENSG00000115866.10 TPM= 4.67 Transcript Type= NA
chr2	136114351	136118165	136114351	136118165	-	ENST00000241393.3@CXCR4	ENST00000241393.3	protein_coding	136118046,136114351	136118165,136115912	Gene ID= ENSG00000121966.6 TPM= 42.03 Transcript Type= protein_coding
chr2	137964473	137967444	137964473	137967444	+	ENST00000280096.5@HNMT	ENST00000280096.5	protein_coding	137964473,137967097	137964628,137967444	Gene ID= ENSG00000150540.13 TPM= 2.34 Transcript Type= protein_coding
chr2	137964310	138016364	137964310	138016364	+	ENST00000280097.4@HNMT	ENST00000280097.4	protein_coding	137964310,137970165,138000918,138002064,138005132,138013775	137964628,137970217,138001025,138002194,138005225,138016364	Gene ID= ENSG00000150540.13 TPM= 21.02 Transcript Type= protein_coding
chr2	138579224	138581796	138579224	138581796	-	transcript6148.chr2.nnic@NA	transcript6148.chr2.nnic	NA	138579224	138581796	Gene ID= novel_gene_chr2_6149 TPM= 2.34 Transcript Type= NA
chr2	142877498	143055832	142877498	143055832	+	ENST00000264170.8@KYNU	ENST00000264170.8	protein_coding	142877498,142885349,142918609,142927659,142954810,142956203,142957641,142960624,142985084,142985948,143029627,143033236,143040428,143042047	142877736,142885536,142918729,142927741,142954871,142956274,142957715,142960770,142985182,142986021,143029679,143033321,143040658,143055832	Gene ID= ENSG00000115919.14 TPM= 3.5 Transcript Type= protein_coding
chr2	142891921	142895250	142891921	142895250	-	transcript6151.chr2.nnic@NA	transcript6151.chr2.nnic	NA	142891921	142895250	Gene ID= novel_gene_chr2_6152 TPM= 2.34 Transcript Type= NA
chr2	143129314	143768352	143129314	143768352	+	ENST00000295095.10@ARHGAP15	ENST00000295095.10	protein_coding	143129314,143155477,143202134,143216384,143228581,143250511,143435601,143436913,143487373,143519266,143556408,143624133,143703419,143767989	143129466,143155655,143202202,143216445,143228668,143250600,143435699,143437042,143487495,143519364,143556485,143624267,143703524,143768352	Gene ID= ENSG00000075884.13 TPM= 7.59 Transcript Type= protein_coding
chr2	143435228	143768352	143435228	143768352	+	transcript6155.chr2.nic@ARHGAP15	transcript6155.chr2.nic	protein_coding	143435228,143435601,143436913,143487373,143519266,143556408,143624133,143703419,143767989	143435289,143435699,143437042,143487495,143519364,143556485,143624267,143703524,143768352	Gene ID= ENSG00000075884.13 TPM= 2.92 Transcript Type= NA
chr2	143944919	144332517	143944919	144332517	-	transcript6161.chr2.nic@GTDC1	transcript6161.chr2.nic	protein_coding	144332439,144235676,144211515,144208603,144145572,144141882,144007182,143970653,143957195,143952773,143951982,143944919	144332517,144235737,144211579,144208804,144145739,144142055,144007535,143970762,143957339,143952843,143952073,143947135	Gene ID= ENSG00000121964.14 TPM= 4.09 Transcript Type= NA
chr2	143945908	144332210	143945908	144332210	-	transcript6162.chr2.nnic@GTDC1	transcript6162.chr2.nnic	protein_coding	144331733,144235676,144211515,144208603,144145572,144141882,144007182,143970653,143957195,143952773,143951982,143945908	144332210,144235737,144211579,144208804,144145739,144142055,144007535,143970762,143957339,143952843,143952073,143947135	Gene ID= ENSG00000121964.14 TPM= 2.92 Transcript Type= NA
chr2	143946014	144332523	143946014	144332523	-	transcript6165.chr2.nic@GTDC1	transcript6165.chr2.nic	protein_coding	144332439,144235676,144211515,144208603,144145572,144141882,144007182,143970653,143952773,143951982,143946014	144332523,144235737,144211579,144208804,144145739,144142055,144007535,143970762,143952843,143952073,143947135	Gene ID= ENSG00000121964.14 TPM= 2.92 Transcript Type= NA
chr2	143946016	144332534	143946016	144332534	-	ENST00000542155.5@GTDC1	ENST00000542155.5	protein_coding	144332439,144235676,144211515,144208603,144145572,144141882,144007182,143970653,143957195,143952773,143951982,143946016	144332534,144235737,144211597,144208804,144145739,144142055,144007535,143970762,143957339,143952843,143952073,143947135	Gene ID= ENSG00000121964.14 TPM= 11.68 Transcript Type= protein_coding
chr2	144384565	144386095	144384565	144386095	-	transcript6176.chr2.nnic@NA	transcript6176.chr2.nnic	NA	144384565	144386095	Gene ID= novel_gene_chr2_6177 TPM= 2.34 Transcript Type= NA
chr2	144384081	144520395	144384081	144520395	-	ENST00000627532.2@ZEB2	ENST00000627532.2	protein_coding	144519939,144517278,144429769,144424796,144404836,144403916,144401199,144398301,144396412,144384081	144520395,144517419,144430026,144424867,144405024,144404130,144401307,144400270,144396592,144390028	Gene ID= ENSG00000169554.18 TPM= 18.68 Transcript Type= protein_coding
chr2	144388341	144520398	144388341	144520398	-	ENST00000636026.2@ZEB2	ENST00000636026.2	protein_coding	144519939,144517278,144429769,144424796,144404836,144403916,144401199,144398301,144396412,144389866,144388341	144520398,144517419,144430026,144424867,144405024,144404130,144401307,144400270,144396592,144390028,144389753	Gene ID= ENSG00000169554.18 TPM= 2.34 Transcript Type= protein_coding
chr2	144511389	144517635	144511389	144517635	-	transcript6190.chr2.nic@ZEB2	transcript6190.chr2.nic	protein_coding	144517278,144511389	144517635,144513797	Gene ID= ENSG00000169554.18 TPM= 4.87 Transcript Type= NA
chr2	144511391	144514451	144511391	144514451	-	ENST00000625161.1@ZEB2	ENST00000625161.1	protein_coding	144511391	144514451	Gene ID= ENSG00000169554.18 TPM= 1.95 Transcript Type= retained_intron
chr2	144511385	144520332	144511385	144520332	-	ENST00000465070.5@ZEB2	ENST00000465070.5	protein_coding	144519939,144517278,144511385	144520332,144517419,144513797	Gene ID= ENSG00000169554.18 TPM= 3.7 Transcript Type= protein_coding
chr2	147844517	147930824	147844517	147930824	+	ENST00000241416.11@ACVR2A	ENST00000241416.11	protein_coding	147844517,147896301,147899458,147899744,147915191,147917283,147918447,147920230,147922973,147926031,147927080	147845207,147896508,147899567,147899898,147915334,147917426,147918592,147920344,147923111,147926161,147930824	Gene ID= ENSG00000121989.14 TPM= 58.38 Transcript Type= protein_coding
chr2	147930397	148021604	147930397	148021604	-	ENST00000264169.6@ORC4	ENST00000264169.6	protein_coding	148021448,147975902,147973448,147972739,147958791,147958298,147955347,147952373,147948051,147943436,147939140,147938298,147938146,147930397	148021604,147975975,147973524,147972829,147958866,147958383,147955395,147952524,147948224,147943522,147939248,147938393,147938213,147935698	Gene ID= ENSG00000115947.13 TPM= 3.5 Transcript Type= protein_coding
chr2	148021154	148025559	148021154	148025559	+	transcript6211.chr2.nnic@NA	transcript6211.chr2.nnic	NA	148021154	148025559	Gene ID= novel_gene_chr2_6212 TPM= 5.84 Transcript Type= NA
chr2	148491299	148494533	148491299	148494533	-	transcript6213.chr2.nnic@NA	transcript6213.chr2.nnic	NA	148491299	148494533	Gene ID= novel_gene_chr2_6214 TPM= 4.67 Transcript Type= NA
chr2	148644984	148787568	148644984	148787568	+	ENST00000258484.10@EPC2	ENST00000258484.10	protein_coding	148644984,148690214,148743622,148753927,148761782,148762670,148764955,148769151,148770792,148771044,148781644,148783597,148784668,148786305	148645170,148690373,148743767,148754133,148761930,148762802,148765146,148769240,148770937,148771387,148781780,148783756,148785001,148787568	Gene ID= ENSG00000135999.11 TPM= 7.01 Transcript Type= protein_coding
chr2	149038467	149215262	149038467	149215262	+	ENST00000409642.7@LYPD6B	ENST00000409642.7	protein_coding	149038467,149130883,149160764,149205253,149208314,149212992,149214546	149038801,149130953,149160835,149205404,149208412,149213122,149215262	Gene ID= ENSG00000150556.16 TPM= 1.17 Transcript Type= protein_coding
chr2	149038718	149215256	149038718	149215256	+	ENST00000409876.5@LYPD6B	ENST00000409876.5	protein_coding	149038718,149130883,149205253,149208314,149212992,149214546	149038801,149130953,149205404,149208412,149213122,149215256	Gene ID= ENSG00000150556.16 TPM= 1.17 Transcript Type= protein_coding
chr2	149569634	149587816	149569634	149587816	-	ENST00000303319.9@MMADHC	ENST00000303319.9	protein_coding	149587664,149587089,149582127,149579431,149576437,149575711,149571085,149569634	149587816,149587149,149582271,149579648,149576542,149575841,149571171,149570168	Gene ID= ENSG00000168288.12 TPM= 56.04 Transcript Type= protein_coding
chr2	149569634	149587728	149569634	149587728	-	transcript6227.chr2.nnic@MMADHC	transcript6227.chr2.nnic	protein_coding	149587664,149587089,149582127,149576437,149575711,149571085,149569634	149587728,149587149,149582271,149576542,149575841,149571171,149570168	Gene ID= ENSG00000168288.12 TPM= 2.34 Transcript Type= NA
chr2	150468195	150487667	150468195	150487667	-	ENST00000375734.6@RND3	ENST00000375734.6	protein_coding	150487268,150486694,150474875,150471627,150468195	150487667,150486781,150474984,150471761,150470238	Gene ID= ENSG00000115963.13 TPM= 28.61 Transcript Type= protein_coding
chr2	150468209	150485382	150468209	150485382	-	ENST00000409557.5@RND3	ENST00000409557.5	protein_coding	150485286,150474875,150471627,150468209	150485382,150474984,150471761,150470238	Gene ID= ENSG00000115963.13 TPM= 1.17 Transcript Type= protein_coding
chr2	150468195	150487694	150468195	150487694	-	ENST00000263895.8@RND3	ENST00000263895.8	protein_coding	150487549,150487268,150486694,150474875,150471627,150468195	150487694,150487455,150486781,150474984,150471761,150470238	Gene ID= ENSG00000115963.13 TPM= 26.27 Transcript Type= protein_coding
chr2	151270465	151289656	151270465	151289656	-	transcript6237.chr2.nic@NMI	transcript6237.chr2.nic	protein_coding	151289593,151288891,151282868,151281948,151278828,151275758,151275484,151271626,151270465	151289656,151289077,151282954,151282043,151278990,151275864,151275670,151271732,151270875	Gene ID= ENSG00000123609.10 TPM= 2.92 Transcript Type= NA
chr2	151270465	151290057	151270465	151290057	-	ENST00000243346.9@NMI	ENST00000243346.9	protein_coding	151289593,151282868,151281948,151278828,151275758,151275484,151271626,151270465	151290057,151282954,151282043,151278990,151275864,151275670,151271732,151270875	Gene ID= ENSG00000123609.10 TPM= 60.13 Transcript Type= protein_coding
chr2	151357592	151380048	151357592	151380048	+	ENST00000243347.4@TNFAIP6	ENST00000243347.4	protein_coding	151357592,151363943,151366056,151370020,151373549,151379364	151357760,151364080,151366217,151370248,151373589,151380048	Gene ID= ENSG00000123610.4 TPM= 7.01 Transcript Type= protein_coding
chr2	151409886	151475388	151409886	151475388	+	ENST00000428287.6@RIF1	ENST00000428287.6	protein_coding	151409886,151410414,151411260,151414823,151416561,151416807,151420190,151422950,151428784,151433077,151435463,151436827,151437241,151438684,151440027,151441905,151443259,151443529,151445338,151446426,151451606,151454895,151456578,151457761,151458811,151460000,151461138,151462242,151462412,151462884,151468000,151468641,151469711,151473964,151474857	151409939,151410527,151411338,151414919,151416688,151416901,151420379,151423042,151428922,151433228,151435580,151437003,151437351,151438746,151440127,151441991,151443329,151443709,151445445,151446575,151451705,151455159,151456620,151457963,151458910,151460119,151461289,151462322,151462466,151466120,151468146,151468756,151469864,151474072,151475388	Gene ID= ENSG00000080345.17 TPM= 1.17 Transcript Type= protein_coding
chr2	151798802	151828488	151798802	151828488	-	ENST00000295087.12@ARL5A	ENST00000295087.12	protein_coding	151828131,151815139,151814169,151812357,151806821,151798802	151828488,151815199,151814316,151812440,151806972,151803324	Gene ID= ENSG00000162980.16 TPM= 4.67 Transcript Type= protein_coding
chr2	151791173	151794085	151791173	151794085	+	transcript6258.chr2.nnic@NA	transcript6258.chr2.nnic	NA	151791173	151794085	Gene ID= novel_gene_chr2_6259 TPM= 2.34 Transcript Type= NA
chr2	151796662	151798566	151796662	151798566	-	transcript6260.chr2.nnic@NA	transcript6260.chr2.nnic	NA	151796662	151798566	Gene ID= novel_gene_chr2_6261 TPM= 2.34 Transcript Type= NA
chr2	152116801	152175997	152116801	152175997	-	transcript6265.chr2.nnic@STAM2	transcript6265.chr2.nnic	protein_coding	152175603,152150145,152148225,152148024,152147162,152144888,152143827,152135509,152133402,152133173,152132114,152126226,152123766,152120294,152116801	152175997,152150229,152148300,152148122,152147308,152144957,152144013,152135603,152133484,152133260,152132168,152126379,152123935,152120802,152120182	Gene ID= ENSG00000115145.9 TPM= 15.18 Transcript Type= NA
chr2	152335113	152649824	152335113	152649824	+	transcript6283.chr2.nnic@FMNL2	transcript6283.chr2.nnic	protein_coding	152335113,152521943,152542739,152549021,152558740,152560883,152575136,152578888,152580956,152607339,152611495,152614851,152617091,152618846,152619509,152625438,152626525,152628299,152629656,152629825,152632008,152636427,152637573,152639958,152640791,152645434,152647796	152335720,152522026,152542819,152549097,152558823,152561035,152575244,152578964,152581049,152607413,152611605,152615000,152617192,152619158,152619718,152625562,152626727,152628533,152629724,152629905,152632137,152636590,152637674,152640056,152640914,152645527,152649824	Gene ID= ENSG00000157827.19 TPM= 15.76 Transcript Type= NA
chr2	152335174	152649823	152335174	152649823	+	transcript6289.chr2.nnic@FMNL2	transcript6289.chr2.nnic	protein_coding	152335174,152521943,152542739,152549021,152558740,152560883,152575136,152578888,152580956,152607339,152611495,152614851,152617091,152618846,152625438,152626525,152628299,152629656,152629825,152632008,152636427,152637573,152639958,152640791,152645434,152647796	152335720,152522026,152542819,152549097,152558823,152561035,152575244,152578964,152581049,152607413,152611605,152615000,152617192,152619718,152625562,152626727,152628533,152629724,152629905,152632137,152636590,152637674,152640056,152640914,152645480,152649823	Gene ID= ENSG00000157827.19 TPM= 8.76 Transcript Type= NA
chr2	152335113	152551159	152335113	152551159	+	transcript6294.chr2.nic@FMNL2	transcript6294.chr2.nic	protein_coding	152335113,152521943,152542739,152549021	152335720,152522026,152542819,152551159	Gene ID= ENSG00000157827.19 TPM= 4.67 Transcript Type= NA
chr2	152391910	152396864	152391910	152396864	-	transcript6295.chr2.nnic@NA	transcript6295.chr2.nnic	NA	152391910	152396864	Gene ID= novel_gene_chr2_6296 TPM= 2.34 Transcript Type= NA
chr2	152655331	152718028	152655331	152718028	-	transcript6299.chr2.nnic@PRPF40A	transcript6299.chr2.nnic	protein_coding	152717993,152717356,152715995,152694542,152693038,152690962,152681226,152679352,152679056,152677451,152676405,152673598,152672978,152672459,152671273,152670231,152669137,152664138,152663876,152663655,152663035,152662603,152659270,152659093,152658948,152657889,152655331	152718028,152717625,152716126,152694622,152693068,152690978,152681336,152679472,152679109,152677475,152676779,152673706,152673042,152672623,152671381,152670381,152669270,152664252,152663967,152663771,152663172,152662698,152659356,152659189,152659009,152658020,152656398	Gene ID= ENSG00000196504.15 TPM= 17.9 Transcript Type= NA
chr2	152656291	152718004	152656291	152718004	-	transcript6305.chr2.nic@PRPF40A	transcript6305.chr2.nic	protein_coding	152717831,152717356,152715995,152694542,152693038,152690962,152681226,152679352,152679056,152677451,152676405,152673598,152672978,152672459,152671273,152670231,152669137,152664138,152663876,152663655,152663035,152662603,152659270,152659093,152658948,152657889,152656291	152718004,152717625,152716126,152694622,152693068,152690978,152681336,152679472,152679109,152677475,152676779,152673706,152673042,152672623,152671381,152670381,152669270,152664252,152663967,152663771,152663172,152662698,152659356,152659189,152659009,152658020,152656398	Gene ID= ENSG00000196504.15 TPM= 3.89 Transcript Type= NA
chr2	152651593	152717981	152651593	152717981	-	ENST00000410080.5@PRPF40A	ENST00000410080.5	protein_coding	152717356,152715995,152694542,152693038,152690962,152681226,152679352,152679056,152677451,152676405,152673598,152672978,152672459,152671273,152670231,152669137,152664138,152663876,152663655,152663035,152662603,152659270,152659093,152658948,152657889,152651593	152717981,152716126,152694622,152693068,152690978,152681336,152679472,152679109,152677475,152676779,152673706,152673042,152672623,152671381,152670381,152669270,152664252,152663967,152663771,152663172,152662698,152659356,152659189,152659009,152658020,152656398	Gene ID= ENSG00000196504.15 TPM= 3.89 Transcript Type= protein_coding
chr2	152655331	152717442	152655331	152717442	-	transcript6308.chr2.nic@PRPF40A	transcript6308.chr2.nic	protein_coding	152717230,152715995,152694542,152693038,152690962,152681226,152679352,152679056,152677451,152676405,152673598,152672978,152672459,152671273,152670231,152669137,152664138,152663876,152663655,152663035,152662603,152659270,152659093,152658948,152657889,152655331	152717442,152716126,152694622,152693068,152690978,152681336,152679472,152679109,152677475,152676779,152673706,152673042,152672623,152671381,152670381,152669270,152664252,152663967,152663771,152663172,152662698,152659356,152659189,152659009,152658020,152656398	Gene ID= ENSG00000196504.15 TPM= 2.92 Transcript Type= NA
chr2	152672565	152717407	152672565	152717407	-	ENST00000545856.5@PRPF40A	ENST00000545856.5	protein_coding	152717230,152715995,152694542,152693038,152690962,152681226,152679352,152679056,152677451,152676405,152673598,152672978,152672565	152717407,152716126,152694622,152693068,152690978,152681336,152679472,152679109,152677475,152676779,152673706,152673042,152672623	Gene ID= ENSG00000196504.15 TPM= 1.17 Transcript Type= protein_coding
chr2	152717893	152760764	152717893	152760764	+	ENST00000495469.5@ARL6IP6	ENST00000495469.5	protein_coding	152717893,152720533,152734994,152759747	152717995,152720586,152735126,152760764	Gene ID= ENSG00000177917.10 TPM= 1.17 Transcript Type= processed_transcript
chr2	153208086	153208163	153208086	153208163	-	ENST00000443733.1@AC079150.2	ENST00000443733.1	processed_pseudogene	153208086	153208163	Gene ID= ENSG00000226338.1 TPM= 1.17 Transcript Type= processed_pseudogene
chr2	153871913	154453849	153871913	154453849	+	ENST00000392825.7@GALNT13	ENST00000392825.7	protein_coding	153871913,153900936,153944394,154140337,154242030,154242698,154245812,154259021,154301409,154395991,154408984,154438592,154450411	153872303,153901007,153944639,154140505,154242196,154242905,154245982,154259138,154301589,154396130,154409082,154438726,154453849	Gene ID= ENSG00000144278.14 TPM= 3.5 Transcript Type= protein_coding
chr2	156324432	156332716	156324432	156332716	-	ENST00000339562.8@NR4A2	ENST00000339562.8	protein_coding	156332480,156330668,156329323,156328404,156327851,156326718,156326150,156324432	156332716,156330791,156330188,156328533,156328014,156326920,156326328,156326000	Gene ID= ENSG00000153234.13 TPM= 3.5 Transcript Type= protein_coding
chr2	156340986	156342259	156340986	156342259	+	transcript6345.chr2.nnic@NA	transcript6345.chr2.nnic	NA	156340986	156342259	Gene ID= novel_gene_chr2_6346 TPM= 2.34 Transcript Type= NA
chr2	156435441	156586403	156435441	156586403	+	ENST00000310454.10@GPD2	ENST00000310454.10	protein_coding	156435441,156476098,156496044,156510796,156512220,156513333,156549608,156550602,156557389,156568825,156569363,156570087,156571134,156578889,156579086,156579690,156582793	156435804,156476207,156496215,156510920,156512317,156513496,156549772,156550746,156557582,156568959,156569538,156570218,156571292,156579001,156579164,156579788,156586403	Gene ID= ENSG00000115159.15 TPM= 7.01 Transcript Type= protein_coding
chr2	157257598	157314211	157257598	157314211	+	ENST00000259056.4@GALNT5	ENST00000259056.4	protein_coding	157257598,157284282,157286015,157295663,157296394,157299548,157300676,157305749,157308567,157311208	157259536,157284448,157286134,157295798,157296513,157299665,157300999,157305829,157308728,157314211	Gene ID= ENSG00000136542.8 TPM= 12.84 Transcript Type= protein_coding
chr2	157313596	157316989	157313596	157316989	+	transcript6370.chr2.nnic@NA	transcript6370.chr2.nnic	NA	157313596	157316989	Gene ID= novel_gene_chr2_6371 TPM= 3.5 Transcript Type= NA
chr2	157414619	157444142	157414619	157444142	-	ENST00000264192.7@CYTIP	ENST00000264192.7	protein_coding	157443847,157434698,157434370,157430860,157430559,157427351,157418523,157414619	157444142,157434747,157434424,157430962,157430652,157427420,157418589,157416143	Gene ID= ENSG00000115165.9 TPM= 8.17 Transcript Type= protein_coding
chr2	157736449	157875834	157736449	157875834	-	transcript6378.chr2.nic@ACVR1	transcript6378.chr2.nic	protein_coding	157875796,157819403,157818385,157799427,157780337,157778131,157774088,157770368,157765921,157760880,157738440,157736449	157875834,157819489,157818559,157799500,157780600,157778342,157774187,157770514,157766196,157761077,157738570,157737665	Gene ID= ENSG00000115170.13 TPM= 3.23 Transcript Type= NA
chr2	157736449	157876114	157736449	157876114	-	transcript6379.chr2.nic@ACVR1	transcript6379.chr2.nic	protein_coding	157875796,157826528,157818385,157799427,157780337,157778131,157774088,157770368,157765921,157760880,157738440,157736449	157876114,157826646,157818559,157799500,157780600,157778342,157774187,157770514,157766196,157761077,157738570,157737665	Gene ID= ENSG00000115170.13 TPM= 11.41 Transcript Type= NA
chr2	157736449	157876317	157736449	157876317	-	transcript6380.chr2.nnic@ACVR1	transcript6380.chr2.nnic	protein_coding	157875796,157860033,157818385,157799427,157780337,157778131,157774088,157770368,157765921,157760880,157738440,157736449	157876317,157860179,157818559,157799500,157780600,157778342,157774187,157770514,157766196,157761077,157738570,157737665	Gene ID= ENSG00000115170.13 TPM= 4.4 Transcript Type= NA
chr2	157736449	157876351	157736449	157876351	-	transcript6381.chr2.nnic@ACVR1	transcript6381.chr2.nnic	protein_coding	157875796,157818269,157799427,157780337,157778131,157774088,157770368,157765921,157760880,157738440,157736449	157876351,157818559,157799500,157780600,157778342,157774187,157770514,157766196,157761077,157738570,157737665	Gene ID= ENSG00000115170.13 TPM= 5.34 Transcript Type= NA
chr2	157736449	157875813	157736449	157875813	-	transcript6383.chr2.nnic@ACVR1	transcript6383.chr2.nnic	protein_coding	157875742,157818385,157799427,157780337,157778131,157774088,157770368,157765921,157760880,157738440,157736449	157875813,157818559,157799500,157780600,157778342,157774187,157770514,157766196,157761077,157738570,157737665	Gene ID= ENSG00000115170.13 TPM= 3.23 Transcript Type= NA
chr2	157736449	157876093	157736449	157876093	-	transcript6387.chr2.nnic@ACVR1	transcript6387.chr2.nnic	protein_coding	157875796,157799427,157780337,157778131,157774088,157770368,157765921,157760880,157738440,157736449	157876093,157799500,157780600,157778342,157774187,157770514,157766196,157761077,157738570,157737665	Gene ID= ENSG00000115170.13 TPM= 3 Transcript Type= NA
chr2	157736449	157875862	157736449	157875862	-	ENST00000434821.5@ACVR1	ENST00000434821.5	protein_coding	157875796,157818385,157799427,157780337,157778131,157774088,157770368,157765921,157760880,157738440,157736449	157875862,157818559,157799500,157780600,157778342,157774187,157770514,157766196,157761077,157738570,157737665	Gene ID= ENSG00000115170.13 TPM= 9.07 Transcript Type= protein_coding
chr2	158457112	158681429	158457112	158681429	+	ENST00000389759.7@PKP4	ENST00000389759.7	protein_coding	158457112,158533180,158577271,158603070,158620990,158621231,158624878,158631753,158634070,158640627,158642486,158658131,158661333,158662897,158663272,158666413,158669720,158673677,158673883,158676739,158678581,158680429	158457218,158533316,158577383,158603104,158621121,158621421,158625427,158631941,158634289,158640759,158642699,158658314,158661450,158663088,158663445,158666563,158669915,158673761,158674000,158676867,158678654,158681429	Gene ID= ENSG00000144283.21 TPM= 8.17 Transcript Type= protein_coding
chr2	158668170	158671002	158668170	158671002	-	transcript6401.chr2.nnic@NA	transcript6401.chr2.nnic	NA	158668170	158671002	Gene ID= novel_gene_chr2_6402 TPM= 4.67 Transcript Type= NA
chr2	158968606	159232659	158968606	159232659	+	transcript6403.chr2.nnic@TANC1	transcript6403.chr2.nnic	protein_coding	158968606,159001080,159065896,159076475,159097637,159136194,159149142,159150370,159163283,159169250,159170524,159172121,159174953,159176352,159178556,159185791,159186902,159194257,159196608,159198975,159217497,159219238,159219692,159224232,159225688,159227819,159228796,159229578	158968782,159001189,159065971,159076528,159097834,159136298,159149272,159150556,159163546,159169372,159170805,159172272,159175184,159176518,159179163,159185899,159187024,159194493,159196793,159199053,159217630,159219361,159219867,159224364,159225779,159227965,159228896,159232659	Gene ID= ENSG00000115183.14 TPM= 3.04 Transcript Type= NA
chr2	158968670	159232659	158968670	159232659	+	transcript6404.chr2.nnic@TANC1	transcript6404.chr2.nnic	protein_coding	158968670,159001080,159065896,159097637,159136194,159149142,159150370,159163283,159169250,159170524,159172121,159174953,159176352,159178556,159185791,159186902,159194257,159196608,159198975,159217497,159219238,159219692,159224232,159225688,159227819,159228796,159229578	158968782,159001189,159065971,159097734,159136298,159149272,159150556,159163546,159169372,159170805,159172272,159175184,159176518,159179163,159185899,159187024,159194493,159196793,159199053,159217630,159219361,159219867,159224364,159225779,159227965,159228896,159232659	Gene ID= ENSG00000115183.14 TPM= 4.2 Transcript Type= NA
chr2	158968667	159232659	158968667	159232659	+	transcript6405.chr2.nnic@TANC1	transcript6405.chr2.nnic	protein_coding	158968667,159001080,159065896,159097637,159136194,159149142,159150370,159163283,159169250,159170524,159172121,159174953,159176352,159178556,159185791,159186902,159194257,159196608,159198975,159217497,159219238,159219692,159224232,159225688,159227819,159228796,159229578	158968782,159001189,159065971,159097834,159136298,159149272,159150556,159163546,159169351,159170805,159172272,159175184,159176518,159179163,159185899,159187024,159194493,159196793,159199053,159217630,159219361,159219867,159224364,159225779,159227965,159228896,159232659	Gene ID= ENSG00000115183.14 TPM= 3.04 Transcript Type= NA
chr2	158968668	159232659	158968668	159232659	+	transcript6407.chr2.nnic@TANC1	transcript6407.chr2.nnic	protein_coding	158968668,159001080,159065896,159097637,159136194,159149142,159150370,159169250,159170524,159172121,159174953,159176352,159178556,159185791,159186902,159194257,159196608,159198975,159217497,159219238,159219692,159224232,159225688,159227819,159228796,159229578	158968782,159001189,159065971,159097734,159136298,159149272,159150556,159169372,159170805,159172272,159175184,159176518,159179163,159185899,159187024,159194493,159196793,159199053,159217630,159219361,159219867,159224364,159225779,159227965,159228896,159232659	Gene ID= ENSG00000115183.14 TPM= 3.04 Transcript Type= NA
chr2	158968606	159062995	158968606	159062995	+	transcript6429.chr2.nnic@TANC1	transcript6429.chr2.nnic	protein_coding	158968606,159001080,159060017	158968782,159001189,159062995	Gene ID= ENSG00000115183.14 TPM= 2.34 Transcript Type= NA
chr2	158968671	159232659	158968671	159232659	+	ENST00000263635.7@TANC1	ENST00000263635.7	protein_coding	158968671,159001080,159065896,159097637,159136194,159149142,159150370,159163283,159169250,159170524,159172121,159174953,159176352,159178556,159185791,159186902,159194257,159196608,159198975,159217497,159219238,159219692,159224232,159225688,159227819,159228796,159229578	158968782,159001189,159065971,159097834,159136298,159149272,159150556,159163546,159169372,159170805,159172272,159175184,159176518,159179163,159185899,159187024,159194493,159196793,159199053,159217630,159219361,159219867,159224364,159225779,159227965,159228896,159232659	Gene ID= ENSG00000115183.14 TPM= 60.25 Transcript Type= protein_coding
chr2	159117871	159122437	159117871	159122437	+	transcript6431.chr2.nnic@NA	transcript6431.chr2.nnic	NA	159117871	159122437	Gene ID= novel_gene_chr2_6432 TPM= 2.34 Transcript Type= NA
chr2	159235798	159286713	159235798	159286713	-	transcript6435.chr2.nnic@WDSUB1	transcript6435.chr2.nnic	protein_coding	159286583,159282672,159279761,159275546,159271702,159259810,159257945,159257758,159256196,159254456,159248372,159235798	159286713,159283093,159279945,159275638,159271795,159259843,159257985,159257864,159256375,159254533,159248512,159236190	Gene ID= ENSG00000196151.10 TPM= 3.5 Transcript Type= NA
chr2	159235798	159286717	159235798	159286717	-	transcript6437.chr2.nnic@WDSUB1	transcript6437.chr2.nnic	protein_coding	159286583,159282672,159279761,159275546,159271702,159259810,159257945,159257758,159256196,159248372,159235798	159286717,159282873,159279945,159275638,159271795,159259843,159257985,159257864,159256375,159248512,159236190	Gene ID= ENSG00000196151.10 TPM= 4.67 Transcript Type= NA
chr2	159235801	159286592	159235801	159286592	-	ENST00000409990.7@WDSUB1	ENST00000409990.7	protein_coding	159286360,159282672,159279761,159275546,159271702,159259810,159257945,159257758,159256196,159248372,159235801	159286592,159283093,159279945,159275638,159271795,159259843,159257985,159257864,159256375,159248512,159236190	Gene ID= ENSG00000196151.10 TPM= 2.92 Transcript Type= protein_coding
chr2	159235793	159286799	159235793	159286799	-	ENST00000359774.8@WDSUB1	ENST00000359774.8	protein_coding	159286583,159282672,159279761,159275546,159271702,159259810,159257945,159257758,159256196,159248372,159235793	159286799,159283093,159279945,159275638,159271795,159259843,159257985,159257864,159256375,159248512,159236190	Gene ID= ENSG00000196151.10 TPM= 20.43 Transcript Type= protein_coding
chr2	159235798	159286703	159235798	159286703	-	ENST00000358147.8@WDSUB1	ENST00000358147.8	protein_coding	159286583,159282672,159279761,159275546,159256196,159248372,159235798	159286703,159283093,159279945,159275638,159256375,159248512,159236190	Gene ID= ENSG00000196151.10 TPM= 1.17 Transcript Type= protein_coding
chr2	159615296	159617082	159615296	159617082	+	ENST00000418474.1@AC009506.1	ENST00000418474.1	antisense_RNA	159615296,159615747	159615453,159617082	Gene ID= ENSG00000224152.1 TPM= 5.84 Transcript Type= antisense_RNA
chr2	159712508	159768860	159712508	159768860	+	transcript6473.chr2.nic@MARCH7	transcript6473.chr2.nic	protein_coding	159712508,159729009,159743061,159745770,159747805,159752402,159759226,159762880,159764626,159767284	159712661,159729175,159743253,159745937,159748903,159752571,159759335,159762993,159764674,159768860	Gene ID= ENSG00000136536.14 TPM= 6.13 Transcript Type= NA
chr2	159712456	159768583	159712456	159768583	+	transcript6478.chr2.nic@MARCH7	transcript6478.chr2.nic	protein_coding	159712456,159729009,159743061,159745770,159747805,159752402,159759226,159762880,159767284	159712661,159729175,159743253,159745937,159748903,159752571,159759335,159762993,159768583	Gene ID= ENSG00000136536.14 TPM= 10.8 Transcript Type= NA
chr2	159761408	159765474	159761408	159765474	-	transcript6515.chr2.nnic@NA	transcript6515.chr2.nnic	NA	159761408	159765474	Gene ID= novel_gene_chr2_6516 TPM= 25.69 Transcript Type= NA
chr2	159776013	159798246	159776013	159798246	-	transcript6504.chr2.nic@CD302	transcript6504.chr2.nic	protein_coding	159798132,159783359,159780882,159780005,159776013	159798246,159783469,159780998,159780178,159777964	Gene ID= ENSG00000241399.6 TPM= 4.67 Transcript Type= NA
chr2	159768630	159798255	159768630	159798255	-	ENST00000553424.5@CD302	ENST00000553424.5	protein_coding	159798132,159780882,159780005,159777938,159768630	159798255,159780998,159780178,159777964,159772053	Gene ID= ENSG00000241399.6 TPM= 15.18 Transcript Type= protein_coding
chr2	159768853	159798242	159768853	159798242	-	ENST00000259053.5@CD302	ENST00000259053.5	protein_coding	159798132,159783359,159780882,159780005,159777938,159768853	159798242,159783469,159780998,159780178,159777964,159772053	Gene ID= ENSG00000241399.6 TPM= 57.21 Transcript Type= protein_coding
chr2	159796137	159798246	159796137	159798246	-	transcript6513.chr2.nnic@NA	transcript6513.chr2.nnic	NA	159796137	159798246	Gene ID= novel_gene_chr2_6514 TPM= 4.67 Transcript Type= NA
chr2	159803355	159904710	159803355	159904710	-	ENST00000263636.4@LY75	ENST00000263636.4	protein_coding	159904589,159898688,159893914,159890213,159886420,159885153,159882124,159881083,159879259,159878633,159878324,159875444,159872451,159864839,159860821,159858362,159854904,159854360,159853630,159853273,159852201,159850362,159849980,159842245,159840729,159835480,159834044,159831670,159819726,159816806,159815405,159810526,159808449,159806973,159803355	159904710,159899059,159894084,159890377,159886530,159885293,159882315,159881240,159879369,159878721,159878493,159875643,159872593,159864920,159860889,159858476,159854939,159854535,159853697,159853352,159852340,159850467,159850140,159842374,159840955,159835645,159834211,159831786,159819920,159817032,159815573,159810675,159808571,159807140,159805222	Gene ID= ENSG00000054219.10 TPM= 4.67 Transcript Type= protein_coding
chr2	160106616	160200313	160106616	160200313	-	transcript6534.chr2.nic@ITGB6	transcript6534.chr2.nic	protein_coding	160200003,160199179,160196216,160195369,160173974,160172569,160169212,160141982,160138065,160137434,160126379,160123791,160112080,160106616	160200313,160199258,160196420,160195615,160174139,160172730,160169307,160142071,160138199,160137851,160126601,160123888,160112199,160107845	Gene ID= ENSG00000115221.10 TPM= 4.96 Transcript Type= NA
chr2	160099667	160200313	160099667	160200313	-	ENST00000620391.4@ITGB6	ENST00000620391.4	protein_coding	160200003,160195369,160173974,160172569,160169212,160141982,160138065,160137434,160126379,160123791,160112080,160107679,160099667	160200313,160195615,160174139,160172730,160169307,160142071,160138199,160137851,160126601,160123888,160112199,160107845,160101834	Gene ID= ENSG00000115221.10 TPM= 15.24 Transcript Type= protein_coding
chr2	160099666	160200301	160099666	160200301	-	ENST00000283249.6@ITGB6	ENST00000283249.6	protein_coding	160200003,160199179,160196216,160195369,160173974,160172569,160169212,160141982,160138065,160137434,160126379,160123791,160112080,160107679,160099666	160200301,160199258,160196420,160195615,160174139,160172730,160169307,160142071,160138199,160137851,160126601,160123888,160112199,160107845,160101834	Gene ID= ENSG00000115221.10 TPM= 131.12 Transcript Type= protein_coding
chr2	160099671	160200304	160099671	160200304	-	ENST00000409583.5@ITGB6	ENST00000409583.5	protein_coding	160200003,160199179,160196389,160195369,160173974,160172569,160169212,160141982,160138065,160137434,160126379,160123791,160112080,160107679,160099671	160200304,160199258,160196420,160195615,160174139,160172730,160169307,160142071,160138199,160137851,160126601,160123888,160112199,160107845,160101834	Gene ID= ENSG00000115221.10 TPM= 26.91 Transcript Type= nonsense_mediated_decay
chr2	160099670	160104311	160099670	160104311	-	transcript6545.chr2.nnic@NA	transcript6545.chr2.nnic	NA	160099670	160104311	Gene ID= novel_gene_chr2_6546 TPM= 9.11 Transcript Type= NA
chr2	160274518	160493568	160274518	160493568	-	transcript6554.chr2.nic@RBMS1	transcript6554.chr2.nic	protein_coding	160493289,160367216,160318169,160313156,160303330,160300651,160286969,160284995,160284775,160282257,160281314,160278548,160277303,160275630,160274518	160493568,160367391,160318227,160313247,160303487,160300730,160287084,160285044,160284868,160282304,160281364,160278658,160277383,160275714,160274764	Gene ID= ENSG00000153250.19 TPM= 3.5 Transcript Type= NA
chr2	160274518	160407863	160274518	160407863	-	transcript6555.chr2.nic@RBMS1	transcript6555.chr2.nic	protein_coding	160407464,160367216,160318169,160313156,160303330,160300651,160286978,160284995,160284775,160282257,160281314,160278548,160277303,160275630,160274518	160407863,160367391,160318227,160313247,160303487,160300730,160287084,160285044,160284868,160282304,160281364,160278658,160277383,160275714,160274764	Gene ID= ENSG00000153250.19 TPM= 4.67 Transcript Type= NA
chr2	160272151	160493794	160272151	160493794	-	ENST00000348849.7@RBMS1	ENST00000348849.7	protein_coding	160493289,160367216,160318169,160313156,160303330,160300651,160286969,160284995,160284775,160281314,160278548,160277303,160275630,160272151	160493794,160367391,160318227,160313247,160303487,160300730,160287084,160285044,160284868,160281364,160278658,160277383,160275714,160274764	Gene ID= ENSG00000153250.19 TPM= 25.69 Transcript Type= protein_coding
chr2	160274518	160407867	160274518	160407867	-	transcript6560.chr2.nic@RBMS1	transcript6560.chr2.nic	protein_coding	160407464,160367216,160318169,160313156,160303330,160300651,160286969,160284995,160284775,160281314,160278548,160277303,160275630,160274518	160407867,160367391,160318227,160313247,160303487,160300730,160287084,160285044,160284868,160281364,160278658,160277383,160275714,160274764	Gene ID= ENSG00000153250.19 TPM= 4.67 Transcript Type= NA
chr2	160274520	160407889	160274520	160407889	-	ENST00000409972.5@RBMS1	ENST00000409972.5	protein_coding	160407464,160367216,160318169,160313156,160303330,160300651,160286978,160284995,160284775,160281314,160278548,160277303,160275630,160274520	160407889,160367391,160318227,160313247,160303487,160300730,160287084,160285044,160284868,160281364,160278658,160277383,160275714,160274764	Gene ID= ENSG00000153250.19 TPM= 12.84 Transcript Type= protein_coding
chr2	160358189	160362849	160358189	160362849	+	transcript6564.chr2.nnic@NA	transcript6564.chr2.nnic	NA	160358189	160362849	Gene ID= novel_gene_chr2_6565 TPM= 3.5 Transcript Type= NA
chr2	161160410	161236172	161160410	161236172	+	transcript6568.chr2.nic@TANK	transcript6568.chr2.nic	protein_coding	161160410,161161285,161179614,161203487,161204675,161223915,161224631,161230971,161235342	161160486,161161412,161179761,161203595,161204793,161223991,161224746,161231551,161236172	Gene ID= ENSG00000136560.13 TPM= 2.34 Transcript Type= NA
chr2	161136908	161236187	161136908	161236187	+	ENST00000259075.6@TANK	ENST00000259075.6	protein_coding	161136908,161179614,161203487,161204675,161223915,161224631,161230971,161235342	161137063,161179761,161203595,161204793,161223991,161224746,161231551,161236187	Gene ID= ENSG00000136560.13 TPM= 12.84 Transcript Type= protein_coding
chr2	161160297	161236172	161160297	161236172	+	ENST00000392749.6@TANK	ENST00000392749.6	protein_coding	161160297,161179614,161203487,161204675,161223915,161224631,161230971,161235342	161160486,161179761,161203595,161204793,161223991,161224746,161231551,161236172	Gene ID= ENSG00000136560.13 TPM= 47.87 Transcript Type= protein_coding
chr2	161160344	161164208	161160344	161164208	+	transcript6577.chr2.nnic@NA	transcript6577.chr2.nnic	NA	161160344	161164208	Gene ID= novel_gene_chr2_6578 TPM= 2.34 Transcript Type= NA
chr2	161244739	161249050	161244739	161249050	+	ENST00000439050.1@LINC01806	ENST00000439050.1	lincRNA	161244739,161246875	161244895,161249050	Gene ID= ENSG00000227403.1 TPM= 2.34 Transcript Type= lincRNA
chr2	161244767	161245303	161244767	161245303	+	transcript6581.chr2.nnic@NA	transcript6581.chr2.nnic	NA	161244767	161245303	Gene ID= novel_gene_chr2_6582 TPM= 2.34 Transcript Type= NA
chr2	161308038	161411717	161308038	161411717	+	ENST00000409682.7@PSMD14	ENST00000409682.7	protein_coding	161308038,161316437,161318822,161367478,161367784,161370107,161371172,161385464,161391104,161395078,161408837,161411302	161308604,161316569,161318873,161367549,161367903,161370177,161371322,161385571,161391178,161395203,161408899,161411717	Gene ID= ENSG00000115233.11 TPM= 75.89 Transcript Type= protein_coding
chr2	161992241	162074542	161992241	162074542	-	ENST00000360534.7@DPP4	ENST00000360534.7	protein_coding	162073976,162073399,162047403,162046915,162045532,162039132,162038949,162038302,162035164,162033541,162024804,162022755,162020581,162020229,162019223,162018729,162017108,162016768,162014396,162011793,162009241,162008562,162005745,161995300,161994961,161992241	162074542,162073486,162047501,162047006,162045612,162039184,162039021,162038422,162035324,162033653,162024939,162022799,162020688,162020296,162019276,162018850,162017155,162016866,162014465,162011987,162009295,162008661,162005809,161995372,161995034,161993384	Gene ID= ENSG00000197635.9 TPM= 102.75 Transcript Type= protein_coding
chr2	162170690	162243535	162170690	162243535	-	ENST00000188790.8@FAP	ENST00000188790.8	protein_coding	162243322,162242908,162226523,162225483,162224466,162223608,162219853,162219063,162217986,162215898,162213938,162209952,162203041,162202872,162200566,162198757,162194701,162189656,162189103,162188169,162183414,162174867,162173723,162173149,162172811,162170690	162243535,162242992,162226621,162225577,162224540,162223660,162219925,162219183,162218140,162216001,162214073,162209996,162203145,162202942,162200619,162198881,162194748,162189754,162189172,162188363,162183468,162174966,162173787,162173221,162172884,162171080	Gene ID= ENSG00000078098.13 TPM= 4.67 Transcript Type= protein_coding
chr2	162267079	162318703	162267079	162318703	-	ENST00000263642.2@IFIH1	ENST00000263642.2	protein_coding	162317855,162310765,162306709,162293564,162288135,162282366,162281328,162279996,162278205,162277415,162276687,162273795,162272226,162268087,162267479,162267079	162318703,162310933,162306855,162293668,162288355,162282576,162281545,162280112,162278328,162277693,162276946,162273944,162272387,162268277,162267569,162267379	Gene ID= ENSG00000115267.5 TPM= 63.05 Transcript Type= protein_coding
chr2	162318765	162361122	162318765	162361122	+	transcript6600.chr2.nnic@GCA	transcript6600.chr2.nnic	protein_coding	162318765,162319282,162347578,162352338,162356438,162356758,162359044,162359494,162360217	162319099,162319395,162347742,162352407,162356481,162356905,162359157,162359552,162361122	Gene ID= ENSG00000115271.10 TPM= 3.5 Transcript Type= NA
chr2	162344088	162361420	162344088	162361420	+	ENST00000437150.6@GCA	ENST00000437150.6	protein_coding	162344088,162347578,162352338,162356438,162356758,162359044,162359494,162360217	162344275,162347742,162352407,162356481,162356905,162359157,162359552,162361420	Gene ID= ENSG00000115271.10 TPM= 3.5 Transcript Type= protein_coding
chr2	162344159	162360971	162344159	162360971	+	ENST00000487445.6@GCA	ENST00000487445.6	protein_coding	162344159,162347578,162352338,162356438,162356758,162359044,162360217	162344275,162347742,162352407,162356481,162356905,162359552,162360971	Gene ID= ENSG00000115271.10 TPM= 1.17 Transcript Type= retained_intron
chr2	163730660	163736245	163730660	163736245	-	transcript6625.chr2.nnic@FIGN	transcript6625.chr2.nnic	protein_coding	163735838,163734903,163730660	163736245,163735072,163733014	Gene ID= ENSG00000182263.13 TPM= 2.34 Transcript Type= NA
chr2	164492816	164621848	164492816	164621848	-	ENST00000263915.7@GRB14	ENST00000263915.7	protein_coding	164621119,164619687,164547660,164527014,164525004,164521980,164508742,164508455,164502255,164497374,164497211,164497008,164494431,164492816	164621848,164619819,164547816,164527135,164525078,164522117,164508852,164508550,164502335,164497490,164497283,164497095,164494524,164493182	Gene ID= ENSG00000115290.9 TPM= 5.84 Transcript Type= protein_coding
chr2	164492816	164568535	164492816	164568535	-	transcript6631.chr2.nic@GRB14	transcript6631.chr2.nic	protein_coding	164568315,164547660,164527014,164525004,164521980,164508742,164508455,164502255,164497374,164497211,164497008,164494431,164492816	164568535,164547816,164527135,164525078,164522117,164508852,164508550,164502335,164497490,164497283,164497095,164494524,164493182	Gene ID= ENSG00000115290.9 TPM= 5.84 Transcript Type= NA
chr2	164651093	164652701	164651093	164652701	-	transcript6642.chr2.nnic@NA	transcript6642.chr2.nnic	NA	164651093	164652701	Gene ID= novel_gene_chr2_6643 TPM= 2.34 Transcript Type= NA
chr2	164826920	164831754	164826920	164831754	-	transcript6640.chr2.nnic@NA	transcript6640.chr2.nnic	NA	164826920	164831754	Gene ID= novel_gene_chr2_6641 TPM= 2.34 Transcript Type= NA
chr2	165747803	165794247	165747803	165794247	-	transcript6645.chr2.nnic@GALNT3	transcript6645.chr2.nnic	protein_coding	165794015,165770186,165764884,165761905,165759336,165758747,165757047,165754932,165754627,165749742,165747803	165794247,165770808,165765056,165762054,165759570,165758864,165757182,165755063,165754728,165749894,165748903	Gene ID= ENSG00000115339.13 TPM= 2.34 Transcript Type= NA
chr2	165747591	165794682	165747591	165794682	-	ENST00000392701.7@GALNT3	ENST00000392701.7	protein_coding	165794015,165770186,165764884,165761905,165759336,165758747,165757047,165754932,165754627,165749742,165747591	165794682,165770808,165765056,165762054,165759570,165758864,165757247,165755063,165754728,165749894,165748903	Gene ID= ENSG00000115339.13 TPM= 2.34 Transcript Type= protein_coding
chr2	165747803	165794692	165747803	165794692	-	transcript6648.chr2.nnic@GALNT3	transcript6648.chr2.nnic	protein_coding	165794325,165770186,165764884,165761905,165759336,165758747,165757047,165754932,165754627,165749742,165747803	165794692,165770808,165765056,165762054,165759570,165758864,165757247,165755063,165754728,165749894,165748903	Gene ID= ENSG00000115339.13 TPM= 8.76 Transcript Type= NA
chr2	165747803	165794245	165747803	165794245	-	transcript6650.chr2.nic@GALNT3	transcript6650.chr2.nic	protein_coding	165794015,165770186,165764884,165761905,165759336,165757047,165754932,165754627,165749742,165747803	165794245,165770808,165765056,165762054,165759570,165758864,165755063,165754728,165749894,165748903	Gene ID= ENSG00000115339.13 TPM= 2.92 Transcript Type= NA
chr2	165873362	165953843	165873362	165953843	-	ENST00000243344.7@TTC21B	ENST00000243344.7	protein_coding	165953685,165949595,165949394,165945524,165943219,165941027,165932973,165931758,165930172,165929650,165929135,165924549,165919276,165917257,165915201,165913574,165912514,165911327,165907678,165901722,165899770,165898686,165890838,165890479,165888279,165883794,165880679,165876165,165873362	165953843,165949724,165949504,165945690,165943341,165941184,165933057,165931856,165930364,165929747,165929335,165924678,165919433,165917481,165915439,165913646,165912624,165911465,165907784,165901910,165899880,165898767,165890988,165890640,165888474,165884018,165880799,165876232,165874832	Gene ID= ENSG00000123607.14 TPM= 5.84 Transcript Type= protein_coding
chr2	166273585	166375869	166273585	166375869	-	transcript6669.chr2.nic@SCN9A	transcript6669.chr2.nic	protein_coding	166375697,166311499,166306956,166306510,166305792,166304238,166303090,166294599,166293231,166288437,166286336,166284486,166281679,166280357,166278140,166273585	166375869,166311806,166307074,166306599,166305920,166304329,166303302,166294662,166293372,166288643,166286623,166284824,166281808,166280595,166278313,166277339	Gene ID= ENSG00000169432.14 TPM= 2.34 Transcript Type= NA
chr2	166403573	166494286	166403573	166494286	-	transcript6677.chr2.nic@SCN7A	transcript6677.chr2.nic	protein_coding	166493968,166486856,166477463,166474226,166473799,166472317,166470615,166465781,166465462,166462389,166456870,166447612,166444762,166443503,166441396,166432318,166429169,166427788,166423259,166421190,166416707,166413068,166412530,166410220,166409665,166403573	166494286,166486968,166477710,166474344,166473888,166472445,166470706,166465987,166465531,166462530,166457076,166447708,166445000,166443676,166441752,166432752,166429274,166427942,166423432,166421297,166416985,166413121,166412667,166410324,166409935,166406646	Gene ID= ENSG00000136546.13 TPM= 10.71 Transcript Type= NA
chr2	166403468	166494251	166403468	166494251	-	transcript6678.chr2.nic@SCN7A	transcript6678.chr2.nic	protein_coding	166493968,166477463,166474226,166473799,166472317,166470615,166465781,166465462,166462389,166456870,166447612,166444762,166443503,166441396,166432318,166429169,166427788,166423259,166421190,166416707,166413068,166412530,166410220,166409665,166403468	166494251,166477710,166474344,166473888,166472445,166470706,166465987,166465531,166462530,166457076,166447708,166445000,166443676,166441752,166432752,166429274,166427942,166423432,166421297,166416985,166413121,166412667,166410324,166409935,166406646	Gene ID= ENSG00000136546.13 TPM= 8.96 Transcript Type= NA
chr2	166440583	166494251	166440583	166494251	-	transcript6689.chr2.nic@SCN7A	transcript6689.chr2.nic	protein_coding	166493968,166477463,166474226,166473799,166472317,166470615,166465781,166465462,166462389,166456870,166447612,166444762,166443503,166440583	166494251,166477710,166474344,166473888,166472445,166470706,166465987,166465531,166462530,166457076,166447708,166445000,166443676,166441752	Gene ID= ENSG00000136546.13 TPM= 3.5 Transcript Type= NA
chr2	167954020	168248141	167954020	168248141	-	ENST00000355999.4@STK39	ENST00000355999.4	protein_coding	168247228,168181978,168167299,168163739,168161787,168140649,168140289,168138088,168129710,168129541,168075109,168074982,168065319,168063500,168017043,168012634,167964662,167954020	168248141,168182090,168167407,168163880,168161842,168140758,168140390,168138221,168129758,168129606,168075231,168075011,168065381,168063570,168017095,168012702,167964726,167955570	Gene ID= ENSG00000198648.10 TPM= 29.77 Transcript Type= protein_coding
chr2	167954020	168247595	167954020	168247595	-	transcript6696.chr2.nnic@STK39	transcript6696.chr2.nnic	protein_coding	168247228,168181978,168167299,168163739,168161787,168140649,168140289,168138088,168129710,168129541,168075109,168074982,168063500,168017043,168012634,167964662,167954020	168247595,168182090,168167407,168163880,168161842,168140758,168140390,168138221,168129758,168129606,168075231,168075011,168063570,168017095,168012702,167964726,167955570	Gene ID= ENSG00000198648.10 TPM= 8.76 Transcript Type= NA
chr2	168240830	168242559	168240830	168242559	+	transcript6698.chr2.nnic@NA	transcript6698.chr2.nnic	NA	168240830	168242559	Gene ID= novel_gene_chr2_6699 TPM= 2.34 Transcript Type= NA
chr2	168455862	168775137	168455862	168775137	+	ENST00000305747.10@CERS6	ENST00000305747.10	protein_coding	168455862,168547596,168561192,168630985,168691034,168694959,168715001,168717872,168765592,168769510	168456618,168547701,168561322,168631042,168691084,168695051,168715129,168717978,168765748,168775137	Gene ID= ENSG00000172292.14 TPM= 10.51 Transcript Type= protein_coding
chr2	168486526	168489604	168486526	168489604	-	transcript6704.chr2.nnic@NA	transcript6704.chr2.nnic	NA	168486526	168489604	Gene ID= novel_gene_chr2_6705 TPM= 2.34 Transcript Type= NA
chr2	168802418	168865514	168802418	168865514	+	ENST00000317647.11@NOSTRIN	ENST00000317647.11	protein_coding	168802418,168811567,168824634,168828158,168828420,168831472,168834227,168842992,168851084,168851279,168855352,168856690,168859512,168860795,168861960,168864834	168802673,168811652,168824717,168828220,168828501,168831534,168834325,168843117,168851182,168851404,168855460,168856778,168859637,168860909,168862049,168865514	Gene ID= ENSG00000163072.15 TPM= 28.02 Transcript Type= protein_coding
chr2	168802597	168865054	168802597	168865054	+	ENST00000445023.6@NOSTRIN	ENST00000445023.6	protein_coding	168802597,168824634,168828158,168828420,168831472,168834227,168842992,168851084,168851279,168855352,168856690,168859512,168860795,168861960,168864834	168802673,168824717,168828220,168828501,168831534,168834325,168843117,168851182,168851404,168855460,168856778,168859637,168860909,168862049,168865054	Gene ID= ENSG00000163072.15 TPM= 1.17 Transcript Type= protein_coding
chr2	168870894	168890445	168870894	168890445	-	ENST00000282074.6@SPC25	ENST00000282074.6	protein_coding	168890318,168889387,168889226,168877238,168876072,168873585,168870894	168890445,168889533,168889291,168877384,168876176,168873683,168871555	Gene ID= ENSG00000152253.8 TPM= 1.17 Transcript Type= protein_coding
chr2	169067035	169096167	169067035	169096167	+	ENST00000357546.6@DHRS9	ENST00000357546.6	protein_coding	169067035,169069453,169081523,169083329,169091790,169095544	169067267,169069717,169081894,169083587,169091953,169096167	Gene ID= ENSG00000073737.16 TPM= 4.67 Transcript Type= protein_coding
chr2	169127109	169362685	169127109	169362685	-	ENST00000263816.7@LRP2	ENST00000263816.7	protein_coding	169362321,169320777,169318762,169307281,169294600,169294148,169292253,169290845,169289026,169282873,169280350,169279372,169277745,169275036,169272927,169270904,169259025,169257124,169256106,169247378,169246705,169244693,169243403,169242956,169240988,169239527,169238091,169237103,169235840,169233411,169231714,169226422,169225310,169220454,169216253,169213657,169211968,169209453,169206330,169206023,169205479,169203982,169202756,169201628,169198786,169196911,169193761,169191832,169187970,169185503,169182167,169181448,169177803,169176411,169175193,169173919,169173096,169172015,169170551,169169702,169168539,169165932,169162472,169157371,169156274,169154460,169152799,169150898,169146739,169145747,169142674,169140455,169139543,169139251,169138577,169137392,169132574,169129013,169127109	169362685,169320884,169318884,169307397,169294710,169294261,169292369,169290997,169289145,169283001,169280519,169279595,169277951,169275238,169273067,169271107,169259217,169257249,169256236,169247515,169246986,169244932,169243522,169243072,169241365,169239775,169238302,169237287,169236068,169233588,169231842,169226588,169225453,169220563,169216430,169213870,169212207,169209641,169207250,169206188,169205637,169204271,169202959,169201870,169198911,169197030,169193892,169192033,169188265,169186019,169182319,169181618,169178026,169176588,169175389,169174164,169173224,169172134,169170667,169169818,169168676,169166054,169162600,169157502,169156405,169154603,169152964,169151026,169146959,169145923,169142793,169140545,169139610,169139371,169138706,169137493,169132681,169129084,169128830	Gene ID= ENSG00000081479.12 TPM= 1.17 Transcript Type= protein_coding
chr2	169479178	169506655	169479178	169506655	+	ENST00000295240.7@BBS5	ENST00000295240.7	protein_coding	169479178,169482251,169487069,169487806,169487987,169492874,169493741,169497627,169499486,169503095,169504303,169504481	169479612,169482333,169487134,169487855,169488114,169493009,169493836,169497689,169499620,169503178,169504326,169506655	Gene ID= ENSG00000163093.11 TPM= 11.68 Transcript Type= protein_coding
chr2	169529749	169573904	169529749	169573904	-	transcript6732.chr2.nic@FASTKD1	transcript6732.chr2.nic	protein_coding	169573669,169571653,169563225,169560387,169557187,169555124,169546218,169544721,169540051,169538013,169537227,169531352,169530587,169529749	169573904,169572171,169563350,169560785,169557297,169555255,169546704,169544835,169540179,169538141,169537340,169531490,169530701,169529926	Gene ID= ENSG00000138399.17 TPM= 2.34 Transcript Type= NA
chr2	169529749	169573873	169529749	169573873	-	ENST00000453153.6@FASTKD1	ENST00000453153.6	protein_coding	169573669,169571653,169569184,169563225,169560387,169557187,169555124,169546218,169544721,169540051,169538013,169537227,169531352,169530587,169529749	169573873,169572171,169569252,169563350,169560785,169557297,169555255,169546704,169544835,169540179,169538141,169537340,169531490,169530701,169529926	Gene ID= ENSG00000138399.17 TPM= 10.51 Transcript Type= protein_coding
chr2	169529755	169573832	169529755	169573832	-	ENST00000453929.6@FASTKD1	ENST00000453929.6	protein_coding	169573669,169571653,169569184,169563225,169560387,169557187,169555124,169546218,169544721,169540051,169537227,169531352,169530587,169529755	169573832,169572171,169569252,169563350,169560785,169557297,169555255,169546704,169544835,169540179,169537340,169531490,169530701,169529926	Gene ID= ENSG00000138399.17 TPM= 2.34 Transcript Type= protein_coding
chr2	169584340	169641406	169584340	169641406	+	ENST00000260970.7@PPIG	ENST00000260970.7	protein_coding	169584340,169603642,169604026,169604187,169606039,169607104,169608671,169614464,169614585,169630774,169631766,169633160,169636092,169636413	169584490,169603694,169604102,169604261,169606146,169607148,169608758,169614493,169614724,169630987,169631933,169633247,169636228,169641406	Gene ID= ENSG00000138398.15 TPM= 4.67 Transcript Type= protein_coding
chr2	169584580	169641406	169584580	169641406	+	transcript6749.chr2.nic@PPIG	transcript6749.chr2.nic	protein_coding	169584580,169603642,169604026,169604187,169606039,169607104,169608671,169614464,169614585,169630774,169631766,169633160,169636092,169636413	169584899,169603694,169604102,169604261,169606146,169607148,169608758,169614493,169614724,169630987,169631933,169633247,169636228,169641406	Gene ID= ENSG00000138398.15 TPM= 4.67 Transcript Type= NA
chr2	169584340	169630966	169584340	169630966	+	transcript6753.chr2.nic@PPIG	transcript6753.chr2.nic	protein_coding	169584340,169603642,169604026,169604187,169606039,169607104,169608671,169614464,169614585,169630774	169584497,169603694,169604102,169604261,169606146,169607148,169608758,169614493,169614724,169630966	Gene ID= ENSG00000138398.15 TPM= 4.67 Transcript Type= NA
chr2	169584647	169630966	169584647	169630966	+	ENST00000414307.5@PPIG	ENST00000414307.5	protein_coding	169584647,169603642,169604026,169604187,169606039,169607104,169608671,169614464,169614585,169630774	169584899,169603694,169604102,169604261,169606146,169607148,169608758,169614493,169614724,169630966	Gene ID= ENSG00000138398.15 TPM= 5.84 Transcript Type= protein_coding
chr2	169694465	169701708	169694465	169701708	+	ENST00000359744.7@PHOSPHO2	ENST00000359744.7	protein_coding	169694465,169695215,169697361,169700946	169694622,169695247,169697531,169701708	Gene ID= ENSG00000144362.11 TPM= 1.17 Transcript Type= protein_coding
chr2	169733846	169751888	169733846	169751888	+	ENST00000392647.6@KLHL23	ENST00000392647.6	protein_coding	169733846,169735013,169741385,169749422	169734087,169736227,169741537,169751888	Gene ID= ENSG00000213160.9 TPM= 12.84 Transcript Type= protein_coding
chr2	169798812	169812064	169798812	169812064	+	ENST00000260956.8@SSB	ENST00000260956.8	protein_coding	169798812,169800952,169805474,169805665,169806785,169806971,169808482,169808860,169810283,169810858,169811183,169811668	169798976,169801026,169805577,169805839,169806892,169807071,169808553,169808902,169810423,169811044,169811323,169812064	Gene ID= ENSG00000138385.15 TPM= 100.41 Transcript Type= protein_coding
chr2	169798847	169812064	169798847	169812064	+	transcript6769.chr2.nic@SSB	transcript6769.chr2.nic	protein_coding	169798847,169800952,169805474,169805665,169806785,169808482,169808860,169810283,169810858,169811183,169811668	169798976,169801026,169805577,169805839,169807071,169808553,169808902,169810423,169811044,169811323,169812064	Gene ID= ENSG00000138385.15 TPM= 2.34 Transcript Type= NA
chr2	169811757	169824931	169811757	169824931	-	ENST00000392640.6@METTL5	ENST00000392640.6	protein_coding	169824868,169824489,169821943,169821092,169819561,169815477,169812457,169811757	169824931,169824640,169822057,169821273,169819643,169815528,169812506,169811858	Gene ID= ENSG00000138382.14 TPM= 13.23 Transcript Type= protein_coding
chr2	169811757	169824925	169811757	169824925	-	ENST00000409965.5@METTL5	ENST00000409965.5	protein_coding	169824782,169824489,169821943,169821092,169819561,169815477,169812457,169811757	169824925,169824640,169822057,169821273,169819643,169815528,169812506,169811858	Gene ID= ENSG00000138382.14 TPM= 16.73 Transcript Type= protein_coding
chr2	169811757	169824914	169811757	169824914	-	ENST00000260953.9@METTL5	ENST00000260953.9	protein_coding	169824489,169821943,169821092,169819561,169815477,169812457,169811757	169824914,169822057,169821273,169819643,169815528,169812506,169811858	Gene ID= ENSG00000138382.14 TPM= 1.55 Transcript Type= protein_coding
chr2	169827458	170084131	169827458	170084131	+	ENST00000272793.9@UBR3	ENST00000272793.9	protein_coding	169827458,169872236,169875791,169877494,169878525,169891165,169895181,169896507,169905114,169906031,169914060,169923929,169924084,169925619,169926692,169926838,169927320,169928729,169932912,169942493,169946288,169947542,169949605,169958438,169986645,169994323,170001304,170006990,170008804,170015281,170029346,170040882,170055460,170061079,170061318,170073428,170079814,170080545,170081726	169828052,169872375,169875949,169877637,169878574,169891231,169895311,169896735,169905293,169906164,169914146,169923994,169924173,169925747,169926744,169926971,169927407,169928868,169933008,169942634,169946392,169947715,169950065,169958526,169986794,169994456,170001414,170007190,170008940,170015366,170029448,170040985,170055584,170061186,170061443,170073607,170080023,170080684,170084131	Gene ID= ENSG00000144357.16 TPM= 10.51 Transcript Type= protein_coding
chr2	170712451	170714567	170712451	170714567	-	ENST00000409786.1@LINC01124	ENST00000409786.1	lincRNA	170712451	170714567	Gene ID= ENSG00000222033.1 TPM= 3.5 Transcript Type= lincRNA
chr2	170723212	170743977	170723212	170743977	-	transcript6795.chr2.nnic@AC007405.1	transcript6795.chr2.nnic	lincRNA	170743892,170740632,170730368,170727659,170727285,170726043,170723212	170743977,170741287,170730997,170727788,170727328,170726089,170723593	Gene ID= ENSG00000234350.4 TPM= 2.34 Transcript Type= NA
chr2	170723212	170743977	170723212	170743977	-	transcript6796.chr2.nnic@AC007405.1	transcript6796.chr2.nnic	lincRNA	170743892,170740632,170730876,170727659,170727285,170726043,170723212	170743977,170741287,170730997,170727788,170727328,170726089,170723593	Gene ID= ENSG00000234350.4 TPM= 2.34 Transcript Type= NA
chr2	170723208	170743977	170723208	170743977	-	transcript6800.chr2.nnic@AC007405.1	transcript6800.chr2.nnic	lincRNA	170743892,170740632,170730368,170727659,170727285,170723208	170743977,170741287,170730997,170727788,170727328,170723593	Gene ID= ENSG00000234350.4 TPM= 3.5 Transcript Type= NA
chr2	170723400	170743977	170723400	170743977	-	transcript6802.chr2.nnic@AC007405.1	transcript6802.chr2.nnic	lincRNA	170743892,170740632,170727659,170727285,170726043,170723400	170743977,170741287,170727788,170727328,170726089,170723593	Gene ID= ENSG00000234350.4 TPM= 2.34 Transcript Type= NA
chr2	170724623	170743956	170724623	170743956	-	transcript6807.chr2.nnic@AC007405.1	transcript6807.chr2.nnic	lincRNA	170743892,170727659,170727285,170724623	170743956,170727788,170727328,170726089	Gene ID= ENSG00000234350.4 TPM= 2.34 Transcript Type= NA
chr2	170771041	170785305	170771041	170785305	+	transcript6818.chr2.nnic@AC007405.3	transcript6818.chr2.nnic	lincRNA	170771041,170777147,170777377,170777644,170782241,170784646	170771187,170777177,170777425,170777680,170782389,170785305	Gene ID= ENSG00000239467.5 TPM= 2.34 Transcript Type= NA
chr2	170771042	170778096	170771042	170778096	+	transcript6826.chr2.nnic@AC007405.3	transcript6826.chr2.nnic	lincRNA	170771042,170777147,170777377,170777644	170771427,170777177,170777425,170778096	Gene ID= ENSG00000239467.5 TPM= 2.34 Transcript Type= NA
chr2	170771036	170778726	170771036	170778726	+	transcript6830.chr2.nnic@AC007405.3	transcript6830.chr2.nnic	lincRNA	170771036,170777377,170777644	170771427,170777425,170778726	Gene ID= ENSG00000239467.5 TPM= 2.34 Transcript Type= NA
chr2	170771113	170778148	170771113	170778148	+	ENST00000426475.1@AC007405.3	ENST00000426475.1	lincRNA	170771113,170777147,170777377,170777644	170771187,170777177,170777425,170778148	Gene ID= ENSG00000239467.5 TPM= 1.17 Transcript Type= lincRNA
chr2	170771036	170798971	170771036	170798971	+	transcript6814.chr2.nnic@ERICH2	transcript6814.chr2.nnic	protein_coding	170771036,170777377,170777644,170782241,170784646,170792863,170798041,170798770	170771427,170777425,170777680,170782389,170784833,170792920,170798112,170798971	Gene ID= ENSG00000204334.7 TPM= 7.01 Transcript Type= NA
chr2	170928526	170967129	170928526	170967129	+	ENST00000234160.4@GORASP2	ENST00000234160.4	protein_coding	170928526,170948350,170949539,170950204,170951328,170954650,170956436,170961663,170962839,170965790	170929403,170948430,170949742,170950290,170951458,170954782,170956559,170961749,170962946,170967129	Gene ID= ENSG00000115806.12 TPM= 52.54 Transcript Type= protein_coding
chr2	171027628	171160895	171027628	171160895	-	transcript6852.chr2.nnic@TLK1	transcript6852.chr2.nnic	protein_coding	171160290,171117739,171082781,171061081,171058151,171056471,171055083,171053761,171050064,171049814,171046174,171028339,171027628	171160895,171117857,171082852,171061156,171058197,171056566,171055172,171053853,171050174,171049950,171046362,171028405,171028148	Gene ID= ENSG00000198586.13 TPM= 2.34 Transcript Type= NA
chr2	171089361	171160914	171089361	171160914	-	transcript6853.chr2.nnic@TLK1	transcript6853.chr2.nnic	protein_coding	171160290,171117739,171089361	171160914,171117857,171092227	Gene ID= ENSG00000198586.13 TPM= 2.34 Transcript Type= NA
chr2	171317409	171434086	171317409	171434086	-	ENST00000375258.8@METTL8	ENST00000375258.8	protein_coding	171433883,171392043,171360422,171339184,171337453,171331804,171330559,171326042,171325841,171317409	171434086,171392197,171360513,171339554,171337502,171331867,171330698,171326148,171325906,171324362	Gene ID= ENSG00000123600.19 TPM= 1.17 Transcript Type= protein_coding
chr2	171317405	171434802	171317405	171434802	-	ENST00000612742.4@METTL8	ENST00000612742.4	protein_coding	171434674,171392043,171360422,171339184,171337453,171331804,171330559,171326042,171325841,171317405	171434802,171392197,171360513,171339554,171337502,171331867,171330698,171326148,171325906,171324362	Gene ID= ENSG00000123600.19 TPM= 1.17 Transcript Type= protein_coding
chr2	171434251	171485052	171434251	171485052	+	ENST00000375255.7@DCAF17	ENST00000375255.7	protein_coding	171434251,171435083,171443523,171448681,171449879,171453124,171457971,171458372,171468888,171473866,171476860,171477987,171480038,171480974	171434703,171435186,171443613,171448817,171449957,171453213,171458075,171458477,171469030,171473975,171476950,171478070,171480193,171485052	Gene ID= ENSG00000115827.13 TPM= 1.17 Transcript Type= protein_coding
chr2	171517270	171517716	171517270	171517716	-	ENST00000433675.1@AC007969.1	ENST00000433675.1	processed_pseudogene	171517270	171517716	Gene ID= ENSG00000233762.3 TPM= 59.55 Transcript Type= processed_pseudogene
chr2	171522348	171558133	171522348	171558133	+	ENST00000321348.8@CYBRD1	ENST00000321348.8	protein_coding	171522348,171541585,171553346,171554524	171522738,171541793,171553500,171558133	Gene ID= ENSG00000071967.11 TPM= 432.01 Transcript Type= protein_coding
chr2	171687409	171748411	171687409	171748411	+	ENST00000340296.8@DYNC1I2	ENST00000340296.8	protein_coding	171687409,171690147,171692777,171707287,171715328,171725618,171725919,171726194,171726791,171727821,171728305,171728717,171729709,171744049,171745802,171747776	171687627,171690263,171692894,171707377,171715443,171725713,171726081,171726293,171726916,171727967,171728418,171728850,171729853,171744189,171745927,171748411	Gene ID= ENSG00000077380.15 TPM= 19.27 Transcript Type= protein_coding
chr2	171687672	171748411	171687672	171748411	+	ENST00000409197.5@DYNC1I2	ENST00000409197.5	protein_coding	171687672,171690147,171692777,171707287,171715328,171725618,171725919,171726194,171726791,171727821,171728305,171728717,171729709,171744049,171745802,171747776	171687873,171690263,171692894,171707377,171715443,171725713,171726081,171726293,171726916,171727967,171728418,171728850,171729853,171744189,171745927,171748411	Gene ID= ENSG00000077380.15 TPM= 67.14 Transcript Type= protein_coding
chr2	171784370	171894252	171784370	171894252	-	ENST00000422440.6@SLC25A12	ENST00000422440.6	protein_coding	171894203,171893205,171868681,171855834,171844369,171837121,171834727,171833963,171826798,171815121,171813339,171810224,171809606,171793627,171791451,171787789,171787571,171784370	171894252,171893258,171868823,171855949,171844508,171837267,171834865,171834056,171826882,171815202,171813497,171810276,171809686,171793767,171791589,171787947,171787661,171785475	Gene ID= ENSG00000115840.13 TPM= 3.5 Transcript Type= protein_coding
chr2	171922448	171983682	171922448	171983682	+	ENST00000412731.5@HAT1	ENST00000412731.5	protein_coding	171922448,171925537,171952881,171965338,171965787,171966409,171966843,171976157,171979247,171983185	171922507,171925641,171953001,171965517,171965908,171966513,171966949,171976308,171979363,171983682	Gene ID= ENSG00000128708.12 TPM= 1.75 Transcript Type= nonsense_mediated_decay
chr2	171922465	171983682	171922465	171983682	+	ENST00000264108.4@HAT1	ENST00000264108.4	protein_coding	171922465,171925537,171946708,171952881,171965338,171965787,171966409,171966843,171976157,171979247,171983185	171922507,171925641,171946783,171953001,171965517,171965908,171966513,171966949,171976308,171979363,171983682	Gene ID= ENSG00000128708.12 TPM= 6.42 Transcript Type= protein_coding
chr2	171999583	172082430	171999583	172082430	+	ENST00000315796.4@METAP1D	ENST00000315796.4	protein_coding	171999583,172061498,172063711,172065604,172066264,172070907,172077797,172079215,172080128,172080328	172000009,172061655,172063860,172065752,172066306,172071070,172077894,172079262,172080206,172082430	Gene ID= ENSG00000172878.13 TPM= 4.67 Transcript Type= protein_coding
chr2	172427557	172506230	172427557	172506230	+	transcript6910.chr2.nnic@ITGA6	transcript6910.chr2.nnic	protein_coding	172427557,172465539,172467481,172469125,172470974,172474055,172474929,172475597,172476395,172479641,172479990,172484782,172485121,172487023,172487264,172487547,172487728,172487961,172488126,172489485,172491024,172491221,172491425,172497975,172501772,172504091	172427970,172465663,172467560,172469380,172471105,172474265,172475122,172475685,172476513,172479739,172480051,172484942,172485264,172487138,172487453,172487630,172487807,172488038,172488228,172489613,172491122,172491331,172491523,172498100,172501901,172506230	Gene ID= ENSG00000091409.14 TPM= 3.89 Transcript Type= NA
chr2	172427555	172506230	172427555	172506230	+	ENST00000264107.11@ITGA6	ENST00000264107.11	protein_coding	172427555,172465539,172467481,172469125,172470974,172474055,172474929,172475597,172476395,172479641,172479990,172484782,172485121,172487023,172487264,172487547,172487728,172487961,172488126,172489485,172491024,172491221,172491425,172497975,172501772,172504091	172427970,172465663,172467560,172469380,172471105,172474265,172475122,172475685,172476513,172479739,172480051,172484942,172485264,172487138,172487453,172487630,172487807,172488038,172488228,172489658,172491122,172491331,172491523,172498100,172501901,172506230	Gene ID= ENSG00000091409.14 TPM= 50.01 Transcript Type= protein_coding
chr2	172427557	172506193	172427557	172506193	+	transcript6914.chr2.nnic@ITGA6	transcript6914.chr2.nnic	protein_coding	172427557,172465539,172467481,172469125,172470974,172474055,172474929,172475597,172476395,172479641,172479990,172484782,172485121,172487023,172487264,172487547,172487728,172487961,172488126,172489485,172491024,172491221,172491425,172497975,172504091	172427970,172465663,172467560,172469380,172471105,172474265,172475122,172475685,172476513,172479739,172480051,172484942,172485264,172487138,172487453,172487630,172487807,172488038,172488228,172489613,172491122,172491331,172491523,172498100,172506193	Gene ID= ENSG00000091409.14 TPM= 8.17 Transcript Type= NA
chr2	172427557	172506230	172427557	172506230	+	transcript6920.chr2.nnic@ITGA6	transcript6920.chr2.nnic	protein_coding	172427557,172465539,172474055,172474929,172475597,172476395,172479641,172479990,172484782,172485121,172487023,172487264,172487547,172487728,172487961,172488126,172489485,172491024,172491221,172491425,172497975,172501772,172504091	172427970,172465663,172474265,172475122,172475685,172476513,172479739,172480051,172484942,172485264,172487138,172487453,172487630,172487807,172488038,172488228,172489658,172491122,172491331,172491523,172498100,172501901,172506230	Gene ID= ENSG00000091409.14 TPM= 5.06 Transcript Type= NA
chr2	172427789	172506282	172427789	172506282	+	ENST00000409080.5@ITGA6	ENST00000409080.5	protein_coding	172427789,172465539,172467481,172469125,172470974,172474055,172474929,172475597,172476395,172479641,172479990,172484782,172485121,172487023,172487264,172487547,172487728,172487961,172488126,172489485,172491024,172491221,172491425,172497975,172504091	172427970,172465663,172467560,172469380,172471105,172474265,172475122,172475685,172476513,172479739,172480051,172484942,172485264,172487138,172487453,172487630,172487807,172488038,172488228,172489658,172491122,172491331,172491523,172498100,172506282	Gene ID= ENSG00000091409.14 TPM= 11.09 Transcript Type= protein_coding
chr2	172464262	172556458	172464262	172556458	-	transcript6927.chr2.nnic@AC078883.1	transcript6927.chr2.nnic	antisense_RNA	172556089,172495375,172464262	172556458,172495516,172464574	Gene ID= ENSG00000225205.5 TPM= 2.34 Transcript Type= NA
chr2	172821575	173052893	172821575	173052893	+	ENST00000397087.7@RAPGEF4	ENST00000397087.7	protein_coding	172821575,172917802,172922281,172960760,172961122,172965562,172967261,172983496,172985433,172988196,172988693,172990810,172996466,173001266,173014464,173016349,173017174,173017426,173018656,173020618,173026572,173027081,173030164,173033914,173036125,173036628,173048600,173051640	172821976,172917874,172922300,172960813,172961228,172965683,172967444,172983580,172985493,172988272,172988839,172990925,172996554,173001344,173014614,173016437,173017204,173017504,173018802,173020715,173026697,173027259,173030254,173033964,173036212,173036692,173048654,173052893	Gene ID= ENSG00000091428.17 TPM= 17.51 Transcript Type= protein_coding
chr2	173090614	173266783	173090614	173266783	+	transcript6937.chr2.nic@MAP3K20	transcript6937.chr2.nic	protein_coding	173090614,173090998,173169805,173182854,173187558,173190895,173191040,173198026,173203796,173209729,173217115,173229689,173232192,173232320,173238373,173239404,173258699,173261063,173263745,173266050	173090830,173091190,173169892,173182955,173187623,173190923,173191177,173198112,173203870,173209835,173217250,173229733,173232222,173232459,173238435,173239496,173258815,173261137,173263895,173266783	Gene ID= ENSG00000091436.16 TPM= 2.34 Transcript Type= NA
chr2	173354820	173368904	173354820	173368904	+	ENST00000347703.7@CDCA7	ENST00000347703.7	protein_coding	173354820,173358712,173363226,173363818,173364795,173365452,173366283,173367150,173367634	173354984,173358837,173363462,173363895,173364989,173365592,173366432,173367286,173368904	Gene ID= ENSG00000144354.13 TPM= 4.67 Transcript Type= protein_coding
chr2	173354861	173368997	173354861	173368997	+	ENST00000306721.7@CDCA7	ENST00000306721.7	protein_coding	173354861,173358712,173359255,173363226,173363818,173364795,173365452,173366283,173367150,173367634	173354984,173358837,173359491,173363462,173363895,173364989,173365592,173366432,173367286,173368997	Gene ID= ENSG00000144354.13 TPM= 1.17 Transcript Type= protein_coding
chr2	173906459	173965702	173906459	173965702	-	ENST00000310015.10@SP3	ENST00000310015.10	protein_coding	173965165,173964405,173963761,173954873,173918593,173913070,173906459	173965702,173964553,173963883,173956232,173918785,173913266,173910257	Gene ID= ENSG00000172845.14 TPM= 7.01 Transcript Type= protein_coding
chr2	173908532	173964787	173908532	173964787	-	transcript6969.chr2.nic@SP3	transcript6969.chr2.nic	protein_coding	173964405,173963761,173954873,173918593,173913070,173908532	173964787,173963883,173956232,173918785,173913266,173910257	Gene ID= ENSG00000172845.14 TPM= 25.69 Transcript Type= NA
chr2	174072447	174248698	174072447	174248698	-	ENST00000284719.7@OLA1	ENST00000284719.7	protein_coding	174248452,174246715,174229308,174223033,174141825,174123595,174123180,174081924,174081152,174078968,174072447	174248698,174246815,174229451,174223160,174142000,174123675,174123277,174082064,174081248,174079090,174075527	Gene ID= ENSG00000138430.15 TPM= 59.55 Transcript Type= protein_coding
chr2	174075008	174248599	174075008	174248599	-	ENST00000344357.9@OLA1	ENST00000344357.9	protein_coding	174248452,174229308,174223033,174141825,174123595,174123180,174081924,174081152,174078968,174075008	174248599,174229451,174223160,174142000,174123675,174123277,174082064,174081248,174079090,174075527	Gene ID= ENSG00000138430.15 TPM= 2.34 Transcript Type= protein_coding
chr2	174348022	174395715	174348022	174395715	-	ENST00000342016.7@CIR1	ENST00000342016.7	protein_coding	174395551,174387685,174381704,174380804,174380651,174380202,174378923,174351619,174350660,174348022	174395715,174387779,174381777,174380814,174380715,174380250,174379040,174351725,174350745,174349172	Gene ID= ENSG00000138433.15 TPM= 8.17 Transcript Type= protein_coding
chr2	174348150	174365658	174348150	174365658	-	transcript6996.chr2.nnic@CIR1	transcript6996.chr2.nnic	protein_coding	174365562,174351619,174350660,174348150	174365658,174351725,174350745,174349172	Gene ID= ENSG00000138433.15 TPM= 3.5 Transcript Type= NA
chr2	174395730	174430071	174395730	174430071	+	transcript7001.chr2.nic@SCRN3	transcript7001.chr2.nic	protein_coding	174395730,174398275,174399922,174400990,174404103,174422885,174424475,174427713	174397404,174398442,174400103,174401189,174404315,174423047,174424649,174430071	Gene ID= ENSG00000144306.14 TPM= 3.5 Transcript Type= NA
chr2	174395759	174428218	174395759	174428218	+	transcript7004.chr2.nic@SCRN3	transcript7004.chr2.nic	protein_coding	174395759,174398275,174399922,174400990,174404103,174422885,174424475,174427713	174396293,174398442,174400103,174401189,174404315,174423047,174424649,174428218	Gene ID= ENSG00000144306.14 TPM= 2.34 Transcript Type= NA
chr2	174430470	174433041	174430470	174433041	-	transcript7015.chr2.nnic@NA	transcript7015.chr2.nnic	NA	174430470	174433041	Gene ID= novel_gene_chr2_7016 TPM= 3.5 Transcript Type= NA
chr2	174562204	174682883	174562204	174682883	-	ENST00000359761.7@WIPF1	ENST00000359761.7	protein_coding	174682774,174585523,174581310,174575204,174571676,174567861,174567070,174562204	174682883,174585611,174581439,174575380,174572446,174568073,174567183,174562602	Gene ID= ENSG00000115935.17 TPM= 3.5 Transcript Type= protein_coding
chr2	174559994	174562422	174559994	174562422	-	transcript7028.chr2.nnic@NA	transcript7028.chr2.nnic	NA	174559994	174562422	Gene ID= novel_gene_chr2_7029 TPM= 2.34 Transcript Type= NA
chr2	174719908	174720318	174719908	174720318	+	ENST00000369387.4@H3F3AP4	ENST00000369387.4	processed_pseudogene	174719908	174720318	Gene ID= ENSG00000235655.3 TPM= 2.34 Transcript Type= processed_pseudogene
chr2	174799515	175005417	174799515	175005417	-	transcript7032.chr2.nic@CHN1	transcript7032.chr2.nic	protein_coding	175005206,175004894,174952164,174944888,174918534,174915058,174877840,174846880,174824434,174821729,174812309,174811511,174808905,174801707,174799515	175005417,175005080,174952202,174944943,174918565,174915171,174878128,174846957,174824518,174821779,174812482,174811588,174809042,174801812,174800287	Gene ID= ENSG00000128656.13 TPM= 2.34 Transcript Type= NA
chr2	174799515	175005417	174799515	175005417	-	transcript7033.chr2.nnic@CHN1	transcript7033.chr2.nnic	protein_coding	175005206,175004894,174952164,174944888,174940816,174918534,174915058,174877840,174846880,174824434,174812309,174811511,174808905,174801707,174799515	175005417,175005080,174952202,174944943,174940894,174918565,174915171,174878128,174846957,174824518,174812482,174811588,174809042,174801812,174800287	Gene ID= ENSG00000128656.13 TPM= 4.67 Transcript Type= NA
chr2	174799363	175005417	174799363	175005417	-	transcript7036.chr2.nic@CHN1	transcript7036.chr2.nic	protein_coding	175005206,175004894,174952164,174944888,174918534,174915058,174877840,174846880,174824434,174812309,174811511,174808905,174801707,174799363	175005417,175005080,174952202,174944943,174918565,174915171,174878128,174846957,174824518,174812482,174811588,174809042,174801812,174800287	Gene ID= ENSG00000128656.13 TPM= 12.84 Transcript Type= NA
chr2	174799515	175005417	174799515	175005417	-	transcript7039.chr2.nnic@CHN1	transcript7039.chr2.nnic	protein_coding	175005206,175004894,174952164,174944888,174940816,174918534,174915058,174846880,174824434,174812309,174811511,174808905,174801707,174799515	175005417,175005080,174952202,174944943,174940894,174918565,174915171,174846957,174824518,174812482,174811588,174809042,174801812,174800287	Gene ID= ENSG00000128656.13 TPM= 2.34 Transcript Type= NA
chr2	174799492	174847549	174799492	174847549	-	ENST00000295497.11@CHN1	ENST00000295497.11	protein_coding	174846880,174824434,174812309,174811511,174808905,174801707,174799492	174847549,174824518,174812482,174811588,174809042,174801812,174800287	Gene ID= ENSG00000128656.13 TPM= 4.67 Transcript Type= protein_coding
chr2	175072250	175168206	175072250	175168206	-	ENST00000264110.6@ATF2	ENST00000264110.6	protein_coding	175168050,175151060,175136412,175130138,175121444,175118251,175117990,175114690,175113994,175111568,175097444,175093061,175080660,175072250	175168206,175151158,175136486,175130207,175121540,175118369,175118118,175114868,175114108,175111654,175097593,175093267,175080765,175074835	Gene ID= ENSG00000115966.16 TPM= 25.69 Transcript Type= protein_coding
chr2	175072250	175168206	175072250	175168206	-	ENST00000345739.9@ATF2	ENST00000345739.9	protein_coding	175168050,175151060,175136412,175130138,175118251,175117990,175114690,175113994,175111568,175097444,175093061,175080660,175072250	175168206,175151158,175136486,175130207,175118369,175118118,175114868,175114108,175111654,175097593,175093267,175080765,175074835	Gene ID= ENSG00000115966.16 TPM= 15.18 Transcript Type= protein_coding
chr2	175176258	175184607	175176258	175184607	-	ENST00000284727.8@ATP5G3	ENST00000284727.8	protein_coding	175181656,175181355,175180098,175179057,175176258	175184607,175181466,175180178,175179250,175178402	Gene ID= ENSG00000154518.9 TPM= 11.68 Transcript Type= protein_coding
chr2	175178067	175181710	175178067	175181710	-	ENST00000409194.5@ATP5G3	ENST00000409194.5	protein_coding	175181656,175181355,175180098,175179057,175178067	175181710,175181483,175180178,175179250,175178402	Gene ID= ENSG00000154518.9 TPM= 1.17 Transcript Type= protein_coding
chr2	175178145	175181663	175178145	175181663	-	ENST00000392541.3@ATP5G3	ENST00000392541.3	protein_coding	175181355,175180098,175179057,175178145	175181663,175180178,175179250,175178402	Gene ID= ENSG00000154518.9 TPM= 8.17 Transcript Type= protein_coding
chr2	175178186	175181710	175178186	175181710	-	ENST00000497075.5@ATP5G3	ENST00000497075.5	protein_coding	175181656,175181355,175180098,175178186	175181710,175181466,175180178,175179250	Gene ID= ENSG00000154518.9 TPM= 3.5 Transcript Type= retained_intron
chr2	175923892	176002345	175923892	176002345	-	ENST00000272748.8@LNPK	ENST00000272748.8	protein_coding	176002160,175995558,175993182,175992231,175979810,175970764,175964506,175964372,175947480,175939552,175938313,175937344,175923892	176002345,175995646,175993223,175992418,175979868,175970804,175964589,175964423,175947692,175939657,175938383,175937514,175930199	Gene ID= ENSG00000144320.13 TPM= 14.01 Transcript Type= protein_coding
chr2	175970764	176002263	175970764	176002263	-	ENST00000392540.6@LNPK	ENST00000392540.6	protein_coding	176002160,175995553,175993182,175992231,175979810,175970764	176002263,175995646,175993223,175992418,175979868,175970804	Gene ID= ENSG00000144320.13 TPM= 1.17 Transcript Type= protein_coding
chr2	176122720	176124937	176122720	176124937	+	ENST00000249499.7@HOXD9	ENST00000249499.7	protein_coding	176122720,176123934	176123585,176124937	Gene ID= ENSG00000128709.12 TPM= 1.17 Transcript Type= protein_coding
chr2	176173195	176188586	176173195	176188586	-	transcript7091.chr2.nic@HAGLR	transcript7091.chr2.nic	antisense_RNA	176188419,176179029,176177332,176173195	176188586,176179098,176177494,176176692	Gene ID= ENSG00000224189.6 TPM= 19.85 Transcript Type= NA
chr2	176175043	176188586	176175043	176188586	-	transcript7093.chr2.nic@HAGLR	transcript7093.chr2.nic	antisense_RNA	176188419,176177711,176177332,176175043	176188586,176179098,176177494,176176692	Gene ID= ENSG00000224189.6 TPM= 2.34 Transcript Type= NA
chr2	176188579	176190907	176188579	176190907	+	ENST00000331462.5@HOXD1	ENST00000331462.5	protein_coding	176188579,176189808	176189453,176190907	Gene ID= ENSG00000128645.14 TPM= 18.68 Transcript Type= protein_coding
chr2	176269395	176338025	176269395	176338025	+	ENST00000420864.5@MTX2	ENST00000420864.5	protein_coding	176269395,176270216,176296860,176297849,176323392,176326825,176328293,176328874,176329301,176330584,176337493	176269669,176270419,176296907,176297895,176323464,176326901,176328385,176328912,176329426,176330660,176338025	Gene ID= ENSG00000128654.13 TPM= 10.51 Transcript Type= nonsense_mediated_decay
chr2	176269419	176338025	176269419	176338025	+	ENST00000249442.10@MTX2	ENST00000249442.10	protein_coding	176269419,176296860,176297849,176323392,176326825,176328293,176328874,176329301,176330584,176337493	176269669,176296907,176297895,176323464,176326901,176328385,176328912,176329426,176330660,176338025	Gene ID= ENSG00000128654.13 TPM= 2.34 Transcript Type= protein_coding
chr2	176629589	176637931	176629589	176637931	-	ENST00000295549.8@LINC01116	ENST00000295549.8	lincRNA	176637462,176633033,176629589	176637931,176633125,176630432	Gene ID= ENSG00000163364.9 TPM= 1.17 Transcript Type= lincRNA
chr2	177212563	177220085	177212563	177220085	+	ENST00000392524.6@HNRNPA3	ENST00000392524.6	protein_coding	177212563,177215539,177215750,177215978,177216503,177216676,177216860,177217705,177219037,177219247,177219408	177212871,177215661,177215896,177216188,177216592,177216771,177216940,177217845,177219159,177219314,177220085	Gene ID= ENSG00000170144.20 TPM= 29.97 Transcript Type= protein_coding
chr2	177212713	177223853	177212713	177223853	+	transcript7115.chr2.nnic@HNRNPA3	transcript7115.chr2.nnic	protein_coding	177212713,177215539,177215750,177215978,177216503,177216676,177216860,177217705,177219037,177219247,177222060	177212871,177215661,177215896,177216188,177216592,177216771,177216940,177217845,177219159,177219314,177223853	Gene ID= ENSG00000170144.20 TPM= 4.87 Transcript Type= NA
chr2	177219581	177223851	177219581	177223851	+	transcript7135.chr2.nnic@NA	transcript7135.chr2.nnic	NA	177219581	177223851	Gene ID= novel_gene_chr2_7136 TPM= 12.26 Transcript Type= NA
chr2	177230305	177265131	177230305	177265131	-	ENST00000397062.7@NFE2L2	ENST00000397062.7	protein_coding	177264532,177234005,177233250,177232392,177230305	177265131,177234271,177233339,177232583,177232008	Gene ID= ENSG00000116044.15 TPM= 220.38 Transcript Type= protein_coding
chr2	177230305	177263800	177230305	177263800	-	ENST00000397063.8@NFE2L2	ENST00000397063.8	protein_coding	177263403,177234005,177233250,177232392,177230305	177263800,177234271,177233339,177232583,177232008	Gene ID= ENSG00000116044.15 TPM= 26.56 Transcript Type= protein_coding
chr2	177247523	177252015	177247523	177252015	+	transcript7137.chr2.nnic@NA	transcript7137.chr2.nnic	NA	177247523	177252015	Gene ID= novel_gene_chr2_7138 TPM= 5.84 Transcript Type= NA
chr2	177318873	177392691	177318873	177392691	-	transcript7163.chr2.nic@AC019080.1	transcript7163.chr2.nic	sense_overlapping	177392573,177338598,177334393,177323304,177318873	177392691,177338699,177334529,177323396,177322237	Gene ID= ENSG00000213963.6 TPM= 2.34 Transcript Type= NA
chr2	177392644	177543836	177392644	177543836	+	ENST00000264167.8@AGPS	ENST00000264167.8	protein_coding	177392644,177420269,177434327,177436764,177436980,177440965,177442407,177445546,177461893,177468416,177482059,177493148,177497689,177499618,177505506,177507970,177513819,177521269,177523748,177538074	177393049,177420358,177434417,177436884,177437054,177441036,177442486,177445626,177462018,177468524,177482186,177493199,177497765,177499730,177505575,177508031,177513908,177521368,177523805,177543836	Gene ID= ENSG00000018510.13 TPM= 15.18 Transcript Type= protein_coding
chr2	177548998	177553014	177548998	177553014	-	ENST00000408939.3@TTC30B	ENST00000408939.3	protein_coding	177548998	177553014	Gene ID= ENSG00000196659.9 TPM= 4.67 Transcript Type= protein_coding
chr2	177612992	177618966	177612992	177618966	-	ENST00000355689.5@TTC30A	ENST00000355689.5	protein_coding	177612992	177618966	Gene ID= ENSG00000197557.6 TPM= 2.34 Transcript Type= protein_coding
chr2	178112455	178129656	178112455	178129656	+	ENST00000286070.9@RBM45	ENST00000286070.9	protein_coding	178112455,178116262,178118055,178120287,178121180,178123522,178123828,178124127,178125984,178129397	178112846,178116384,178118181,178120409,178121359,178123651,178123912,178124290,178126184,178129656	Gene ID= ENSG00000155636.14 TPM= 5.84 Transcript Type= protein_coding
chr2	178194500	178382779	178194500	178382779	+	ENST00000357080.8@OSBPL6	ENST00000357080.8	protein_coding	178194500,178284927,178306030,178324177,178328256,178331552,178332641,178332871,178336301,178338991,178349224,178361682,178373890,178382420	178194674,178285121,178306286,178324269,178328378,178331605,178332754,178333041,178336433,178339094,178349389,178361815,178374027,178382779	Gene ID= ENSG00000079156.16 TPM= 1.17 Transcript Type= protein_coding
chr2	178413691	178435407	178413691	178435407	+	transcript7198.chr2.nnic@AC009948.1	transcript7198.chr2.nnic	antisense_RNA	178413691,178426366,178430695,178433382	178414113,178426680,178430889,178435407	Gene ID= ENSG00000223960.6 TPM= 5.84 Transcript Type= NA
chr2	178431414	178451231	178431414	178451231	-	ENST00000325748.8@PRKRA	ENST00000325748.8	protein_coding	178450966,178450242,178447505,178444422,178443267,178441610,178436145,178431414	178451231,178450411,178447586,178444500,178443384,178441704,178436319,178432254	Gene ID= ENSG00000180228.12 TPM= 49.04 Transcript Type= protein_coding
chr2	178436043	178451170	178436043	178451170	-	transcript7194.chr2.nic@PRKRA	transcript7194.chr2.nic	protein_coding	178450966,178450242,178447505,178444422,178443267,178441610,178436043	178451170,178450411,178447586,178444500,178443384,178441704,178436319	Gene ID= ENSG00000180228.12 TPM= 2.34 Transcript Type= NA
chr2	178463664	178478558	178463664	178478558	-	ENST00000424785.6@FKBP7	ENST00000424785.6	protein_coding	178478279,178477062,178469652,178463664	178478558,178477213,178469785,178465931	Gene ID= ENSG00000079150.17 TPM= 4.67 Transcript Type= protein_coding
chr2	178480491	178505056	178480491	178505056	+	transcript7207.chr2.nic@PLEKHA3	transcript7207.chr2.nic	protein_coding	178480491,178485641,178488968,178490659,178493853,178495496,178499211,178501061,178503760	178480909,178485757,178489014,178490814,178493989,178495660,178499254,178501176,178505056	Gene ID= ENSG00000116095.10 TPM= 5.84 Transcript Type= NA
chr2	178523221	178541799	178523221	178541799	+	transcript7218.chr2.nic@TTN-AS1	transcript7218.chr2.nic	antisense_RNA	178523221,178531314,178535732,178537604,178538698	178523636,178531578,178535828,178537691,178541799	Gene ID= ENSG00000237298.9 TPM= 3.5 Transcript Type= NA
chr2	179109322	179264809	179109322	179264809	-	transcript7241.chr2.nic@SESTD1	transcript7241.chr2.nic	protein_coding	179264499,179191787,179183080,179176448,179172120,179151278,179149297,179146402,179143592,179132304,179124364,179121770,179117532,179116574,179115065,179112724,179109322	179264809,179191866,179183188,179176538,179172233,179151391,179149394,179146457,179143803,179132426,179124558,179121929,179117613,179116790,179115256,179112845,179110028	Gene ID= ENSG00000187231.13 TPM= 2.34 Transcript Type= NA
chr2	179102517	179107990	179102517	179107990	-	transcript7245.chr2.nnic@NA	transcript7245.chr2.nnic	NA	179102517	179107990	Gene ID= novel_gene_chr2_7246 TPM= 7.01 Transcript Type= NA
chr2	179441982	179561914	179441982	179561914	-	transcript7249.chr2.nnic@ZNF385B	transcript7249.chr2.nnic	protein_coding	179561786,179544827,179518528,179483272,179446525,179445550,179444876,179441982	179561914,179544969,179518638,179483434,179446770,179445728,179444977,179443468	Gene ID= ENSG00000144331.18 TPM= 15.76 Transcript Type= NA
chr2	179441993	179562588	179441993	179562588	-	ENST00000336917.9@ZNF385B	ENST00000336917.9	protein_coding	179562399,179544827,179518528,179483272,179446525,179445550,179444876,179441993	179562588,179544969,179518638,179483434,179446770,179445728,179444977,179443468	Gene ID= ENSG00000144331.18 TPM= 4.09 Transcript Type= protein_coding
chr2	179497407	179497548	179497407	179497548	+	transcript7255.chr2.nnic@NA	transcript7255.chr2.nnic	NA	179497407	179497548	Gene ID= novel_gene_chr2_7256 TPM= 2.34 Transcript Type= NA
chr2	179744314	179746059	179744314	179746059	-	transcript7257.chr2.nnic@NA	transcript7257.chr2.nnic	NA	179744314	179746059	Gene ID= novel_gene_chr2_7258 TPM= 4.67 Transcript Type= NA
chr2	180980606	181063441	180980606	181063441	+	ENST00000410062.8@UBE2E3	ENST00000410062.8	protein_coding	180980606,180982018,180984043,181057693,181060665,181062791	180980973,180982236,180984093,181057825,181060812,181063441	Gene ID= ENSG00000170035.15 TPM= 65.39 Transcript Type= protein_coding
chr2	181457225	181536187	181457225	181536187	+	ENST00000397033.6@ITGA4	ENST00000397033.6	protein_coding	181457225,181458196,181474960,181475159,181478757,181480137,181481598,181482360,181482514,181485881,181493325,181494722,181495371,181495783,181498623,181509658,181511699,181522191,181523437,181524171,181525202,181527297,181529541,181530524,181531657,181534272,181534816,181535432	181457851,181458317,181475066,181475288,181478824,181480266,181481683,181482422,181482651,181485992,181493419,181494812,181495416,181495937,181498777,181509807,181511775,181522341,181523532,181524250,181525291,181527387,181529648,181530649,181531776,181534370,181534935,181536187	Gene ID= ENSG00000115232.13 TPM= 3.5 Transcript Type= protein_coding
chr2	181891701	181930738	181891701	181930738	+	transcript7287.chr2.nic@SSFA2	transcript7287.chr2.nic	protein_coding	181891701,181892615,181896030,181896908,181898880,181899014,181900696,181901766,181909899,181913845,181915216,181918598,181918755,181919296,181920597,181921948,181928161,181929561	181892277,181892660,181896079,181896964,181898919,181899112,181900904,181902466,181909971,181913933,181916427,181918675,181918882,181919446,181920650,181922412,181928278,181930738	Gene ID= ENSG00000138434.16 TPM= 12.69 Transcript Type= NA
chr2	181891833	181894695	181891833	181894695	+	ENST00000480753.1@SSFA2	ENST00000480753.1	protein_coding	181891833,181892615	181892277,181894695	Gene ID= ENSG00000138434.16 TPM= 12.84 Transcript Type= retained_intron
chr2	181891888	181930738	181891888	181930738	+	ENST00000431877.6@SSFA2	ENST00000431877.6	protein_coding	181891888,181892615,181896030,181896908,181898880,181899014,181900696,181901766,181909899,181913845,181915216,181918598,181918755,181919296,181920597,181921948,181928161,181929561	181892277,181892660,181896079,181896964,181898919,181899112,181900904,181902466,181909971,181913933,181916427,181918675,181918882,181919446,181920662,181922412,181928278,181930738	Gene ID= ENSG00000138434.16 TPM= 148.72 Transcript Type= protein_coding
chr2	181891985	181930738	181891985	181930738	+	ENST00000409001.5@SSFA2	ENST00000409001.5	protein_coding	181891985,181892615,181896030,181896908,181898880,181899014,181900696,181901766,181909899,181913845,181915216,181918598,181918755,181919296,181921948,181928161,181929561	181892277,181892660,181896079,181896964,181898919,181899112,181900904,181902466,181909971,181913933,181916427,181918675,181918882,181919446,181922412,181928278,181930738	Gene ID= ENSG00000138434.16 TPM= 17.36 Transcript Type= protein_coding
chr2	181891955	181930738	181891955	181930738	+	ENST00000320370.11@SSFA2	ENST00000320370.11	protein_coding	181891955,181892615,181896030,181896908,181898880,181899014,181900696,181901766,181909899,181913845,181915216,181918598,181918755,181919296,181920597,181921948,181929561	181892277,181892660,181896079,181896964,181898919,181899112,181900904,181902466,181909971,181913933,181916427,181918675,181918882,181919446,181920662,181922412,181930738	Gene ID= ENSG00000138434.16 TPM= 10.74 Transcript Type= protein_coding
chr2	181954492	181977164	181954492	181977164	+	transcript7315.chr2.nic@PPP1R1C	transcript7315.chr2.nic	protein_coding	181954492,181975219	181954634,181977164	Gene ID= ENSG00000150722.10 TPM= 2.34 Transcript Type= NA
chr2	182167887	182427048	182167887	182427048	-	ENST00000351439.9@PDE1A	ENST00000351439.9	protein_coding	182426578,182264301,182240110,182234432,182231015,182230006,182223864,182205940,182201688,182201439,182188979,182186468,182185892,182167887	182427048,182264414,182240292,182234498,182231131,182230146,182223964,182206065,182201789,182201559,182189060,182186588,182186079,182168290	Gene ID= ENSG00000115252.18 TPM= 5.84 Transcript Type= protein_coding
chr2	182716233	182778513	182716233	182778513	+	transcript7332.chr2.nic@DNAJC10	transcript7332.chr2.nic	protein_coding	182716233,182717016,182718157,182720007,182722025,182728576,182728863,182729848,182731030,182732499,182736249,182740299,182741243,182743598,182751658,182752072,182755003,182756314,182757692,182758837,182759160,182762682,182775316,182777121	182716483,182717072,182718290,182720169,182722075,182728658,182728994,182729941,182731107,182732542,182736386,182740388,182741356,182743712,182751785,182752188,182755104,182756469,182757825,182758890,182759307,182762801,182775420,182778513	Gene ID= ENSG00000077232.17 TPM= 5.84 Transcript Type= NA
chr2	182716041	182780025	182716041	182780025	+	ENST00000616986.4@DNAJC10	ENST00000616986.4	protein_coding	182716041,182717016,182717941,182720007,182722025,182728576,182728863,182729848,182731030,182732499,182740299,182741243,182743598,182751658,182752072,182755003,182756314,182757692,182758837,182759160,182762682,182775316,182777121	182716483,182717072,182718290,182720169,182722075,182728658,182728994,182729941,182731107,182732542,182740388,182741356,182743712,182751785,182752188,182755104,182756469,182757825,182758890,182759307,182762801,182775420,182780025	Gene ID= ENSG00000077232.17 TPM= 4.67 Transcript Type= protein_coding
chr2	182833275	182867162	182833275	182867162	-	ENST00000295113.4@FRZB	ENST00000295113.4	protein_coding	182866075,182858786,182842478,182838409,182837948,182833275	182867162,182858833,182842543,182838613,182838011,182834965	Gene ID= ENSG00000162998.4 TPM= 5.84 Transcript Type= protein_coding
chr2	182924877	183038858	182924877	183038858	-	ENST00000360982.2@NCKAP1	ENST00000360982.2	protein_coding	183037992,183024978,183023806,183003233,183002974,183002127,183001953,182995701,182994839,182989030,182986171,182983286,182982821,182981244,182978834,182976893,182967216,182964676,182962159,182957457,182956462,182953113,182952793,182952405,182942070,182935293,182934752,182930695,182928783,182928117,182926816,182924877	183038858,183024995,183023916,183003325,183003030,183002269,183002043,182995838,182994887,182989186,182986227,182983382,182982927,182981376,182978915,182976951,182967361,182964808,182962278,182957596,182956593,182953331,182952923,182952502,182942163,182935375,182934832,182930788,182928899,182928226,182926905,182925818	Gene ID= ENSG00000061676.14 TPM= 216 Transcript Type= protein_coding
chr2	182909115	183038472	182909115	183038472	-	ENST00000361354.8@NCKAP1	ENST00000361354.8	protein_coding	183037992,183023806,183003233,183002974,183002127,183001953,182995701,182994839,182989030,182986171,182983286,182982821,182981244,182978834,182976893,182967216,182964676,182962159,182957457,182956462,182953113,182952793,182952405,182942070,182935293,182934752,182930695,182928783,182928117,182926816,182909115	183038472,183023916,183003325,183003030,183002269,183002043,182995838,182994887,182989186,182986227,182983382,182982927,182981376,182978915,182976951,182967361,182964808,182962278,182957596,182956593,182953331,182952923,182952502,182942163,182935375,182934832,182930788,182928899,182928226,182926905,182925818	Gene ID= ENSG00000061676.14 TPM= 19.85 Transcript Type= protein_coding
chr2	183078759	183100005	183078759	183100005	+	ENST00000354221.4@DUSP19	ENST00000354221.4	protein_coding	183078759,183083508,183087040,183095431	183079159,183083554,183087192,183100005	Gene ID= ENSG00000162999.12 TPM= 2.34 Transcript Type= protein_coding
chr2	183124355	183161680	183124355	183161680	+	ENST00000295119.8@NUP35	ENST00000295119.8	protein_coding	183124355,183128287,183130418,183133566,183151508,183157444,183158283,183159488,183161054	183124497,183128457,183130545,183133623,183151649,183157513,183158411,183159652,183161680	Gene ID= ENSG00000163002.12 TPM= 7.01 Transcript Type= protein_coding
chr2	184595883	184598958	184595883	184598958	-	transcript7362.chr2.nic@AC096667.1	transcript7362.chr2.nic	antisense_RNA	184598268,184595883	184598958,184596376	Gene ID= ENSG00000283839.1 TPM= 2.34 Transcript Type= NA
chr2	186486230	186509363	186486230	186509363	+	transcript7369.chr2.nic@ZC3H15	transcript7369.chr2.nic	protein_coding	186486230,186495233,186500182,186501273,186502496,186504032,186505451,186505740,186506713,186508543	186486457,186495334,186500293,186501425,186502552,186504214,186505597,186505841,186506836,186509363	Gene ID= ENSG00000065548.17 TPM= 4.67 Transcript Type= NA
chr2	186486156	186509363	186486156	186509363	+	ENST00000337859.10@ZC3H15	ENST00000337859.10	protein_coding	186486156,186495233,186500182,186501273,186502496,186504032,186505451,186505740,186506713,186508543	186486457,186495334,186500293,186501425,186502587,186504214,186505597,186505841,186506836,186509363	Gene ID= ENSG00000065548.17 TPM= 57.21 Transcript Type= protein_coding
chr2	186486230	186504154	186486230	186504154	+	transcript7374.chr2.nic@ZC3H15	transcript7374.chr2.nic	protein_coding	186486230,186495233,186500182,186501273,186502496	186486457,186495334,186500293,186501425,186504154	Gene ID= ENSG00000065548.17 TPM= 3.5 Transcript Type= NA
chr2	186590058	186680901	186590058	186680901	+	transcript7378.chr2.nnic@ITGAV	transcript7378.chr2.nnic	protein_coding	186590058,186602021,186622339,186625473,186630797,186633329,186636082,186637065,186638277,186638409,186640915,186641386,186646686,186649840,186651982,186654650,186656247,186659038,186663768,186664494,186665126,186666704,186667150,186667671,186668762,186669701,186675820,186676813,186677197	186590523,186602151,186622430,186625587,186630858,186633374,186636207,186637109,186638320,186638465,186640967,186641588,186646877,186649885,186652089,186654708,186656401,186659175,186663835,186664641,186665218,186666783,186667230,186667776,186668920,186669814,186675927,186676935,186680901	Gene ID= ENSG00000138448.11 TPM= 4.29 Transcript Type= NA
chr2	186589990	186680901	186589990	186680901	+	transcript7379.chr2.nnic@ITGAV	transcript7379.chr2.nnic	protein_coding	186589990,186602021,186622339,186625473,186630797,186633329,186636082,186637065,186638277,186638409,186640915,186641386,186646686,186649840,186651982,186654650,186656247,186659038,186663768,186664494,186665126,186666704,186667150,186667671,186668762,186669701,186676813,186677197	186590523,186602151,186622430,186625587,186630858,186633374,186636207,186637109,186638320,186638465,186640967,186641588,186646877,186649885,186652089,186654708,186656401,186659175,186663835,186664641,186665218,186666783,186667230,186667776,186668920,186669814,186676935,186680901	Gene ID= ENSG00000138448.11 TPM= 4.29 Transcript Type= NA
chr2	186590065	186680901	186590065	186680901	+	ENST00000261023.7@ITGAV	ENST00000261023.7	protein_coding	186590065,186602021,186622339,186625473,186630797,186633329,186636082,186637065,186638277,186638409,186640915,186641386,186646686,186649840,186651982,186654650,186656247,186659038,186663768,186664494,186665126,186666704,186667150,186667671,186668762,186669701,186675604,186675820,186676813,186677197	186590523,186602151,186622430,186625587,186630858,186633374,186636207,186637109,186638320,186638465,186640967,186641588,186646877,186649885,186652089,186654708,186656401,186659175,186663835,186664641,186665218,186666783,186667230,186667776,186668920,186669814,186675717,186675927,186676935,186680901	Gene ID= ENSG00000138448.11 TPM= 66.17 Transcript Type= protein_coding
chr2	186693971	186765965	186693971	186765965	+	ENST00000304698.9@FAM171B	ENST00000304698.9	protein_coding	186693971,186740228,186743483,186747092,186751134,186753933,186761113,186761479	186694411,186740461,186743575,186747250,186751304,186754049,186761236,186765965	Gene ID= ENSG00000144369.12 TPM= 3.5 Transcript Type= protein_coding
chr2	187343129	187448460	187343129	187448460	-	ENST00000409998.5@CALCRL	ENST00000409998.5	protein_coding	187448039,187431297,187387666,187387329,187385545,187383173,187380677,187380467,187378940,187363376,187360598,187359212,187359063,187352114,187351920,187343129	187448460,187431364,187387756,187387493,187385631,187383305,187380787,187380579,187379031,187363502,187360751,187359272,187359129,187352332,187351961,187346399	Gene ID= ENSG00000064989.12 TPM= 10.51 Transcript Type= protein_coding
chr2	187343129	187448460	187343129	187448460	-	ENST00000392370.7@CALCRL	ENST00000392370.7	protein_coding	187448039,187387666,187387329,187385545,187383173,187380677,187380467,187378940,187363376,187360598,187359212,187359063,187352114,187351920,187343129	187448460,187387756,187387493,187385631,187383305,187380787,187380579,187379031,187363502,187360751,187359272,187359129,187352332,187351961,187346399	Gene ID= ENSG00000064989.12 TPM= 12.84 Transcript Type= protein_coding
chr2	187464230	187554492	187464230	187554492	-	transcript7472.chr2.nic@TFPI	transcript7472.chr2.nic	protein_coding	187554200,187529364,187503648,187496881,187488337,187484811,187484124,187467753,187464230	187554492,187529485,187503770,187497078,187488375,187484987,187484216,187467932,187467042	Gene ID= ENSG00000003436.15 TPM= 26.21 Transcript Type= NA
chr2	187464230	187522744	187464230	187522744	-	transcript7489.chr2.nnic@TFPI	transcript7489.chr2.nnic	protein_coding	187522624,187503648,187496881,187488337,187484811,187484124,187467753,187464230	187522744,187503770,187497078,187488375,187484987,187484216,187467932,187467042	Gene ID= ENSG00000003436.15 TPM= 13.37 Transcript Type= NA
chr2	187497016	187554461	187497016	187554461	-	ENST00000420747.1@TFPI	ENST00000420747.1	protein_coding	187554200,187544504,187520542,187513616,187503648,187497016	187554461,187544637,187520613,187513646,187503770,187497078	Gene ID= ENSG00000003436.15 TPM= 1.17 Transcript Type= protein_coding
chr2	187464261	187554492	187464261	187554492	-	ENST00000233156.8@TFPI	ENST00000233156.8	protein_coding	187554200,187503648,187496881,187488337,187484811,187484124,187467753,187464261	187554492,187503770,187497078,187488375,187484987,187484216,187467932,187467042	Gene ID= ENSG00000003436.15 TPM= 180.33 Transcript Type= protein_coding
chr2	187464230	187513641	187464230	187513641	-	ENST00000392365.5@TFPI	ENST00000392365.5	protein_coding	187513616,187503648,187496881,187488337,187484811,187484124,187467753,187464230	187513641,187503770,187497078,187488375,187484987,187484216,187467932,187467042	Gene ID= ENSG00000003436.15 TPM= 25.04 Transcript Type= protein_coding
chr2	187478585	187554438	187478585	187554438	-	ENST00000339091.8@TFPI	ENST00000339091.8	protein_coding	187554200,187503648,187496881,187488337,187484811,187484124,187478585	187554438,187503770,187497078,187488375,187484987,187484216,187478803	Gene ID= ENSG00000003436.15 TPM= 17.57 Transcript Type= protein_coding
chr2	187546284	187554433	187546284	187554433	-	transcript7518.chr2.nnic@NA	transcript7518.chr2.nnic	NA	187546284	187554433	Gene ID= novel_gene_chr2_7519 TPM= 5.84 Transcript Type= NA
chr2	188291687	188595059	188291687	188595059	+	transcript7527.chr2.nic@GULP1	transcript7527.chr2.nic	protein_coding	188291687,188383763,188466475,188477659,188483431,188522756,188529097,188541181,188569239,188570028,188584265,188587855,188589740,188593940	188292166,188383889,188466568,188477730,188483492,188522827,188529195,188541318,188569355,188570120,188584403,188587949,188589750,188595059	Gene ID= ENSG00000144366.15 TPM= 2.34 Transcript Type= NA
chr2	188291687	188595926	188291687	188595926	+	transcript7529.chr2.nic@GULP1	transcript7529.chr2.nic	protein_coding	188291687,188383763,188466475,188477659,188483431,188522756,188529097,188541181,188569239,188570028,188584265,188587855,188593940	188292166,188383889,188466568,188477730,188483492,188522827,188529195,188541318,188569355,188570120,188584403,188587949,188595926	Gene ID= ENSG00000144366.15 TPM= 3.5 Transcript Type= NA
chr2	188291669	188595059	188291669	188595059	+	ENST00000409843.5@GULP1	ENST00000409843.5	protein_coding	188291669,188383763,188477659,188483431,188522756,188529097,188541181,188569239,188570028,188584265,188587855,188589740,188593940	188292166,188383889,188477730,188483492,188522827,188529195,188541318,188569355,188570120,188584403,188587949,188589750,188595059	Gene ID= ENSG00000144366.15 TPM= 17.51 Transcript Type= protein_coding
chr2	188292827	188595059	188292827	188595059	+	transcript7537.chr2.nnic@GULP1	transcript7537.chr2.nnic	protein_coding	188292827,188383763,188477659,188483431,188522756,188529097,188541181,188569239,188570028,188584265,188587855,188589740,188593940	188293180,188383889,188477730,188483492,188522827,188529195,188541318,188569355,188570120,188584403,188587949,188589750,188595059	Gene ID= ENSG00000144366.15 TPM= 2.34 Transcript Type= NA
chr2	188291747	188595059	188291747	188595059	+	transcript7539.chr2.nic@GULP1	transcript7539.chr2.nic	protein_coding	188291747,188383763,188477659,188483431,188522756,188529097,188569239,188570028,188584265,188587855,188589740,188593940	188292166,188383889,188477730,188483492,188522827,188529195,188569355,188570120,188584403,188587949,188589750,188595059	Gene ID= ENSG00000144366.15 TPM= 3.5 Transcript Type= NA
chr2	188292772	188595931	188292772	188595931	+	ENST00000359135.7@GULP1	ENST00000359135.7	protein_coding	188292772,188383763,188477659,188483431,188522756,188529097,188541181,188569239,188570028,188584265,188587855,188593940	188293112,188383889,188477730,188483492,188522827,188529195,188541318,188569355,188570120,188584403,188587949,188595931	Gene ID= ENSG00000144366.15 TPM= 5.84 Transcript Type= protein_coding
chr2	188974320	189012746	188974320	189012746	+	ENST00000304636.7@COL3A1	ENST00000304636.7	protein_coding	188974320,188984760,188985197,188985665,188987059,188988081,188988590,188989396,188990096,188990307,188991004,188991487,188991669,188992184,188992887,188993361,188994038,188994234,188994541,188994724,188995046,188995692,188996125,188996398,188997165,188997336,188997700,188998266,188998674,188999285,188999470,188999842,189001397,189001536,189002298,189002955,189003411,189003734,189003982,189004257,189005350,189006206,189006345,189006937,189007500,189007885,189008035,189008924,189010178,189010648,189011628	188974568,188984962,188985247,188985778,188987139,188988134,188988643,188989449,188990149,188990360,188991057,188991531,188991722,188992228,188992940,188993459,188994082,188994332,188994594,188994831,188995099,188995790,188996178,188996496,188997218,188997389,188997753,188998319,188998718,188999383,188999577,188999895,189001450,189001589,189002351,189003062,189003464,189003787,189004143,189004364,189005457,189006259,189006452,189006990,189007607,189007938,189008142,189009221,189010365,189010890,189012746	Gene ID= ENSG00000168542.14 TPM= 242.86 Transcript Type= protein_coding
chr2	189031896	189179879	189031896	189179879	-	ENST00000374866.7@COL5A2	ENST00000374866.7	protein_coding	189179508,189110225,189104264,189100107,189098727,189097277,189092310,189088695,189086726,189085719,189085160,189083984,189080990,189079978,189079063,189078516,189075393,189072040,189068786,189068226,189068015,189066729,189066390,189065004,189064557,189063980,189063172,189063010,189062865,189061562,189060730,189058849,189058429,189057320,189056973,189054159,189053895,189053424,189052911,189052749,189052172,189051320,189050569,189049347,189048209,189045800,189045179,189043151,189042720,189041586,189039272,189036616,189034916,189031896	189179879,189110449,189104277,189100139,189098759,189097330,189092420,189088772,189086770,189085772,189085213,189084037,189081043,189080031,189079107,189078569,189075437,189072093,189068884,189068270,189068113,189066782,189066497,189065057,189064655,189064033,189063270,189063063,189062918,189061615,189060783,189058893,189058527,189057427,189057026,189054212,189053948,189053477,189053018,189052802,189052225,189051481,189050676,189049454,189048262,189045907,189045232,189043258,189042773,189041693,189039563,189036803,189035155,189034216	Gene ID= ENSG00000204262.11 TPM= 3.5 Transcript Type= protein_coding
chr2	189441433	189475565	189441433	189475565	+	ENST00000314761.8@WDR75	ENST00000314761.8	protein_coding	189441433,189448379,189450903,189451805,189455320,189457311,189458753,189459336,189462484,189463694,189463846,189465079,189466425,189467468,189468475,189469344,189470076,189470819,189474186,189474717,189475213	189441578,189448508,189450968,189451895,189455444,189457381,189458872,189459424,189462642,189463753,189463961,189465254,189466582,189467648,189468569,189469439,189470245,189470878,189474332,189474808,189475565	Gene ID= ENSG00000115368.9 TPM= 14.01 Transcript Type= protein_coding
chr2	189441485	189476346	189441485	189476346	+	transcript7589.chr2.nnic@WDR75	transcript7589.chr2.nnic	protein_coding	189441485,189448379,189450903,189451805,189455320,189457311,189458753,189459336,189462484,189463694,189463846,189466425,189467468,189468475,189469344,189470076,189470819,189474186,189474717,189475213	189441578,189448508,189450968,189451895,189455444,189457381,189458872,189459424,189462642,189463753,189463961,189466582,189467648,189468569,189469439,189470245,189470878,189474332,189474808,189476346	Gene ID= ENSG00000115368.9 TPM= 2.34 Transcript Type= NA
chr2	189460512	189467111	189460512	189467111	-	transcript7592.chr2.nnic@NA	transcript7592.chr2.nnic	NA	189460512	189467111	Gene ID= novel_gene_chr2_7593 TPM= 3.5 Transcript Type= NA
chr2	189560579	189580788	189560579	189580788	-	transcript7596.chr2.nnic@SLC40A1	transcript7596.chr2.nnic	protein_coding	189580418,189579813,189578219,189575161,189572846,189571715,189565354,189563584,189560579	189580788,189579880,189578353,189575320,189572961,189571841,189565599,189564225,189562191	Gene ID= ENSG00000138449.10 TPM= 62.37 Transcript Type= NA
chr2	189560579	189580789	189560579	189580789	-	transcript7597.chr2.nnic@SLC40A1	transcript7597.chr2.nnic	protein_coding	189580418,189579813,189578219,189575161,189572846,189571715,189565354,189563584,189560579	189580789,189579880,189578472,189575320,189572961,189571841,189565599,189564225,189562191	Gene ID= ENSG00000138449.10 TPM= 55.37 Transcript Type= NA
chr2	189661394	189671284	189661394	189671284	+	transcript7619.chr2.nic@ASNSD1	transcript7619.chr2.nic	protein_coding	189661394,189663901,189665422,189666041,189667764,189670441	189661610,189663954,189665451,189667596,189667945,189671284	Gene ID= ENSG00000138381.9 TPM= 2.34 Transcript Type= NA
chr2	189661420	189670831	189661420	189670831	+	ENST00000260952.8@ASNSD1	ENST00000260952.8	protein_coding	189661420,189663901,189665376,189666041,189667764,189670441	189661610,189663954,189665451,189667596,189667945,189670831	Gene ID= ENSG00000138381.9 TPM= 58.38 Transcript Type= protein_coding
chr2	189746660	189762783	189746660	189762783	-	transcript7628.chr2.nic@OSGEPL1	transcript7628.chr2.nic	protein_coding	189762685,189761420,189755173,189754141,189753916,189752849,189752653,189750550,189746660	189762783,189761660,189755560,189754345,189754064,189752979,189752724,189750656,189747331	Gene ID= ENSG00000128694.11 TPM= 8.17 Transcript Type= NA
chr2	189746660	189762767	189746660	189762767	-	ENST00000264151.9@OSGEPL1	ENST00000264151.9	protein_coding	189762685,189761420,189755173,189754141,189753916,189752849,189752653,189750550,189746660	189762767,189761660,189755560,189754345,189754064,189752979,189752724,189750656,189747168	Gene ID= ENSG00000128694.11 TPM= 1.17 Transcript Type= protein_coding
chr2	189762704	189765556	189762704	189765556	+	ENST00000520651.1@OSGEPL1-AS1	ENST00000520651.1	antisense_RNA	189762704,189764855,189765459	189762992,189764975,189765556	Gene ID= ENSG00000253559.1 TPM= 1.17 Transcript Type= antisense_RNA
chr2	189769419	189773734	189769419	189773734	+	transcript7682.chr2.nnic@NA	transcript7682.chr2.nnic	NA	189769419	189773734	Gene ID= novel_gene_chr2_7683 TPM= 17.51 Transcript Type= NA
chr2	189771312	189784371	189771312	189784371	-	ENST00000392349.8@ORMDL1	ENST00000392349.8	protein_coding	189784269,189783014,189782422,189775565,189771312	189784371,189783123,189782602,189775716,189771902	Gene ID= ENSG00000128699.13 TPM= 10.12 Transcript Type= protein_coding
chr2	189771312	189784346	189771312	189784346	-	transcript7664.chr2.nnic@ORMDL1	transcript7664.chr2.nnic	protein_coding	189784269,189783014,189782422,189775565,189771312	189784346,189783402,189782602,189775716,189771902	Gene ID= ENSG00000128699.13 TPM= 6.62 Transcript Type= NA
chr2	189770323	189784364	189770323	189784364	-	ENST00000392350.7@ORMDL1	ENST00000392350.7	protein_coding	189784269,189782422,189775565,189770323	189784364,189782602,189775716,189771902	Gene ID= ENSG00000128699.13 TPM= 8.17 Transcript Type= protein_coding
chr2	189784381	189877629	189784381	189877629	+	ENST00000441310.6@PMS1	ENST00000441310.6	protein_coding	189784381,189791790,189795769,189805652,189818017,189843964,189852655,189853939,189854239,189863743,189867799,189873496,189877272	189784593,189791941,189795951,189805754,189818180,189844080,189852777,189854082,189855128,189864228,189867929,189873656,189877629	Gene ID= ENSG00000064933.17 TPM= 14.01 Transcript Type= protein_coding
chr2	189784450	189864688	189784450	189864688	+	transcript7652.chr2.nic@PMS1	transcript7652.chr2.nic	protein_coding	189784450,189791790,189795769,189805652,189818017,189843964,189852655,189853939,189854239,189863743	189784593,189791941,189795951,189805754,189818180,189844080,189852777,189854082,189855128,189864688	Gene ID= ENSG00000064933.17 TPM= 3.5 Transcript Type= NA
chr2	189784544	189877629	189784544	189877629	+	ENST00000447232.6@PMS1	ENST00000447232.6	protein_coding	189784544,189791790,189795769,189805652,189818017,189843964,189852655,189853939,189854239,189867799,189873496,189877272	189784593,189791941,189795951,189805754,189818180,189844080,189852777,189854082,189855128,189867929,189873656,189877629	Gene ID= ENSG00000064933.17 TPM= 1.17 Transcript Type= protein_coding
chr2	190180863	190203484	190180863	190203484	+	ENST00000340623.4@C2orf88	ENST00000340623.4	protein_coding	190180863,190199697	190181109,190203484	Gene ID= ENSG00000187699.10 TPM= 2.34 Transcript Type= protein_coding
chr2	190204634	190320045	190204634	190320045	-	ENST00000359678.9@HIBCH	ENST00000359678.9	protein_coding	190319716,190310754,190296813,190294546,190290405,190287586,190261156,190252162,190249640,190246154,190244887,190212956,190208880,190204634	190320045,190310796,190296953,190294630,190290485,190287638,190261234,190252307,190249726,190246212,190244968,190213075,190208913,190205232	Gene ID= ENSG00000198130.15 TPM= 37.36 Transcript Type= protein_coding
chr2	190343470	190371664	190343470	190371664	+	ENST00000392329.6@INPP1	ENST00000392329.6	protein_coding	190343470,190348888,190360039,190362627,190366695,190369103,190370844	190343961,190349031,190360306,190362687,190366895,190369277,190371664	Gene ID= ENSG00000151689.12 TPM= 14.01 Transcript Type= protein_coding
chr2	190343574	190371583	190343574	190371583	+	transcript7700.chr2.nnic@INPP1	transcript7700.chr2.nnic	protein_coding	190343574,190360039,190362627,190365113,190366695,190369103,190370844	190343961,190360306,190362687,190365202,190366895,190369277,190371583	Gene ID= ENSG00000151689.12 TPM= 3.5 Transcript Type= NA
chr2	190343570	190371665	190343570	190371665	+	ENST00000322522.8@INPP1	ENST00000322522.8	protein_coding	190343570,190360039,190362627,190366695,190369103,190370844	190343961,190360306,190362687,190366895,190369277,190371665	Gene ID= ENSG00000151689.12 TPM= 54.88 Transcript Type= protein_coding
chr2	190343914	190371583	190343914	190371583	+	transcript7705.chr2.nic@INPP1	transcript7705.chr2.nic	protein_coding	190343914,190360039,190362627,190366695,190369103,190370844	190344078,190360306,190362687,190366895,190369277,190371583	Gene ID= ENSG00000151689.12 TPM= 3.5 Transcript Type= NA
chr2	190407820	190502315	190407820	190502315	+	transcript7718.chr2.nic@MFSD6	transcript7718.chr2.nic	protein_coding	190407820,190435977,190469758,190488657,190489768,190497439,190500015	190408503,190437561,190469855,190488818,190489866,190497719,190502315	Gene ID= ENSG00000151690.14 TPM= 26.47 Transcript Type= NA
chr2	190437424	190502113	190437424	190502113	+	ENST00000434582.5@MFSD6	ENST00000434582.5	protein_coding	190437424,190469758,190488657,190489768,190497439,190499832,190500015	190437561,190469855,190488818,190489866,190497719,190499856,190502113	Gene ID= ENSG00000151690.14 TPM= 3.5 Transcript Type= protein_coding
chr2	190408355	190502315	190408355	190502315	+	ENST00000392328.5@MFSD6	ENST00000392328.5	protein_coding	190408355,190415292,190435977,190469758,190488657,190489768,190497439,190500015	190408503,190415413,190437561,190469855,190488818,190489866,190497719,190502315	Gene ID= ENSG00000151690.14 TPM= 15.18 Transcript Type= protein_coding
chr2	190534533	190535192	190534533	190535192	+	transcript7731.chr2.nnic@NA	transcript7731.chr2.nnic	NA	190534533	190535192	Gene ID= novel_gene_chr2_7732 TPM= 2.34 Transcript Type= NA
chr2	190648791	190692766	190648791	190692766	+	transcript7734.chr2.nnic@NAB1	transcript7734.chr2.nnic	protein_coding	190648791,190649846,190655977,190659158,190670326,190673101,190683738,190685476,190687201,190690245	190648971,190649982,190656153,190659995,190670459,190673152,190683827,190685638,190687317,190692766	Gene ID= ENSG00000138386.16 TPM= 6.42 Transcript Type= NA
chr2	190649564	190692766	190649564	190692766	+	transcript7738.chr2.nic@NAB1	transcript7738.chr2.nic	protein_coding	190649564,190655977,190659158,190670326,190673101,190683738,190685476,190687201,190690245	190649982,190656153,190659995,190670459,190673152,190683827,190685638,190687317,190692766	Gene ID= ENSG00000138386.16 TPM= 6.42 Transcript Type= NA
chr2	190880816	190935286	190880816	190935286	+	transcript7780.chr2.nic@GLS	transcript7780.chr2.nic	protein_coding	190880816,190895152,190895604,190900564,190901947,190905004,190910263,190921024,190921145,190923917,190924543,190927306,190930437,190931545,190932657	190881470,190895248,190895725,190900693,190902026,190905167,190910321,190921056,190921203,190923983,190924593,190927482,190930568,190931637,190935286	Gene ID= ENSG00000115419.12 TPM= 10.8 Transcript Type= NA
chr2	190880834	190935289	190880834	190935289	+	ENST00000338435.8@GLS	ENST00000338435.8	protein_coding	190880834,190895152,190895604,190900564,190901947,190905004,190910263,190921024,190921145,190923917,190924543,190927306,190930437,190931545,190932716	190881470,190895248,190895725,190900693,190902026,190905167,190910321,190921056,190921203,190923983,190924593,190927482,190930568,190931637,190935289	Gene ID= ENSG00000115419.12 TPM= 127.56 Transcript Type= protein_coding
chr2	190880827	190965552	190880827	190965552	+	ENST00000320717.7@GLS	ENST00000320717.7	protein_coding	190880827,190895152,190895604,190900564,190901947,190905004,190910263,190921024,190921145,190923917,190924543,190927306,190930437,190931545,190953565,190954584,190954755,190962830	190881470,190895248,190895725,190900693,190902026,190905167,190910321,190921056,190921203,190923983,190924593,190927482,190930568,190931637,190953626,190954660,190954818,190965552	Gene ID= ENSG00000115419.12 TPM= 39.99 Transcript Type= protein_coding
chr2	190912348	190917568	190912348	190917568	-	transcript7787.chr2.nnic@NA	transcript7787.chr2.nnic	NA	190912348	190917568	Gene ID= novel_gene_chr2_7788 TPM= 52.54 Transcript Type= NA
chr2	190915159	190920044	190915159	190920044	-	transcript7789.chr2.nnic@NA	transcript7789.chr2.nnic	NA	190915159	190920044	Gene ID= novel_gene_chr2_7790 TPM= 17.51 Transcript Type= NA
chr2	190969034	191014250	190969034	191014250	-	ENST00000361099.7@STAT1	ENST00000361099.7	protein_coding	191014018,191013525,191009876,191008963,191007563,191001074,190999626,190998217,190997856,190995061,190991228,190989615,190987039,190986854,190985619,190984310,190983642,190982383,190980620,190979772,190978856,190976840,190975812,190974830,190969034	191014250,191013678,191010004,191009107,191007661,191001163,190999704,190998308,190998007,190995219,190991320,190989674,190987068,190986947,190985660,190984393,190983740,190982518,190980669,190979866,190979001,190977025,190975887,190974932,190970717	Gene ID= ENSG00000115415.18 TPM= 125.71 Transcript Type= protein_coding
chr2	190975537	191014168	190975537	191014168	-	ENST00000392322.7@STAT1	ENST00000392322.7	protein_coding	191014018,191013525,191009876,191008963,191007563,191001074,190999626,190998217,190997856,190995061,190991228,190989615,190987039,190986854,190985619,190984310,190983642,190982383,190980620,190979772,190978856,190976840,190975537	191014168,191013678,191010004,191009107,191007661,191001163,190999704,190998308,190998007,190995219,190991320,190989674,190987068,190986947,190985660,190984393,190983740,190982518,190980669,190979866,190979001,190977025,190975887	Gene ID= ENSG00000115415.18 TPM= 22.97 Transcript Type= protein_coding
chr2	190975642	191014197	190975642	191014197	-	ENST00000392323.6@STAT1	ENST00000392323.6	protein_coding	191014018,191013525,191010367,191009876,191008963,191007563,191001074,190999626,190998217,190997856,190995061,190991228,190989615,190987039,190986854,190985619,190984310,190983642,190982383,190980620,190979772,190978856,190976840,190975642	191014197,191013678,191010449,191010004,191009107,191007661,191001163,190999704,190998308,190998007,190995219,190991320,190989674,190987068,190986947,190985660,190984393,190983740,190982518,190980669,190979866,190979001,190977025,190975887	Gene ID= ENSG00000115415.18 TPM= 2.34 Transcript Type= protein_coding
chr2	191029580	191151260	191029580	191151260	-	ENST00000392320.6@STAT4	ENST00000392320.6	protein_coding	191150947,191148076,191146613,191076227,191073098,191069693,191066430,191064807,191062762,191061729,191058710,191058202,191058018,191054490,191041065,191039199,191036164,191034548,191033911,191033490,191032958,191031450,191030972,191029580	191151260,191148204,191146757,191076325,191073190,191069771,191066515,191064958,191062920,191061821,191058769,191058219,191058111,191054534,191041148,191039297,191036299,191034597,191034005,191033626,191033149,191031516,191031080,191029866	Gene ID= ENSG00000138378.17 TPM= 2.34 Transcript Type= protein_coding
chr2	191245224	191425320	191245224	191425320	+	transcript7805.chr2.nic@MYO1B	transcript7805.chr2.nic	protein_coding	191245224,191276887,191296111,191329935,191341461,191346236,191350162,191360631,191362268,191363728,191364158,191369542,191370227,191381462,191383280,191385884,191387224,191390292,191392108,191393073,191396429,191400382,191402632,191408115,191409044,191411066,191414048,191414517,191416115,191423837	191245626,191277030,191296226,191330029,191341565,191346282,191350225,191360729,191362371,191363875,191364276,191369628,191370292,191381566,191383342,191386084,191387450,191390492,191392201,191393222,191396497,191400468,191402718,191408189,191409178,191411172,191414180,191414669,191416242,191425320	Gene ID= ENSG00000128641.18 TPM= 12.35 Transcript Type= NA
chr2	191245276	191425389	191245276	191425389	+	ENST00000339514.8@MYO1B	ENST00000339514.8	protein_coding	191245276,191276887,191296111,191329935,191341461,191346236,191350162,191360631,191362268,191363728,191364158,191369542,191370227,191381462,191383280,191385884,191387224,191390292,191392108,191393073,191396429,191400382,191408115,191409044,191411066,191414048,191414517,191416115,191423837	191245626,191277030,191296226,191330029,191341565,191346282,191350225,191360729,191362371,191363875,191364276,191369628,191370292,191381566,191383342,191386084,191387450,191390492,191392201,191393222,191396497,191400468,191408189,191409178,191411172,191414180,191414669,191416242,191425389	Gene ID= ENSG00000128641.18 TPM= 35.32 Transcript Type= protein_coding
chr2	191245389	191425384	191245389	191425384	+	ENST00000392318.7@MYO1B	ENST00000392318.7	protein_coding	191245389,191276887,191296111,191329935,191341461,191346236,191350162,191360631,191362268,191363728,191364158,191369542,191370227,191381462,191383280,191385884,191387224,191390292,191392108,191393073,191396429,191400382,191400749,191402632,191408115,191409044,191411066,191414048,191414517,191416115,191423837	191245626,191277030,191296226,191330029,191341565,191346282,191350225,191360729,191362371,191363875,191364276,191369628,191370292,191381566,191383342,191386084,191387450,191390492,191392201,191393222,191396497,191400468,191400835,191402718,191408189,191409178,191411172,191414180,191414669,191416242,191425384	Gene ID= ENSG00000128641.18 TPM= 5.84 Transcript Type= protein_coding
chr2	191260256	191262398	191260256	191262398	-	transcript7828.chr2.nnic@NA	transcript7828.chr2.nnic	NA	191260256	191262398	Gene ID= novel_gene_chr2_7829 TPM= 3.5 Transcript Type= NA
chr2	191300641	191304215	191300641	191304215	-	transcript7830.chr2.nnic@NA	transcript7830.chr2.nnic	NA	191300641	191304215	Gene ID= novel_gene_chr2_7831 TPM= 5.84 Transcript Type= NA
chr2	191359314	191363823	191359314	191363823	-	transcript7832.chr2.nnic@NA	transcript7832.chr2.nnic	NA	191359314	191363823	Gene ID= novel_gene_chr2_7833 TPM= 2.34 Transcript Type= NA
chr2	191678136	191687572	191678136	191687572	+	ENST00000307849.7@NABP1	ENST00000307849.7	protein_coding	191678136,191678990,191681946,191682492,191683729,191684230,191685599	191678705,191679128,191682017,191682595,191683804,191684296,191687572	Gene ID= ENSG00000173559.12 TPM= 16.35 Transcript Type= nonsense_mediated_decay
chr2	191678136	191696659	191678136	191696659	+	ENST00000410026.6@NABP1	ENST00000410026.6	protein_coding	191678136,191678990,191681946,191683729,191684230,191685599	191678241,191679128,191682017,191683804,191684296,191696659	Gene ID= ENSG00000173559.12 TPM= 2.34 Transcript Type= protein_coding
chr2	191678139	191686939	191678139	191686939	+	transcript7842.chr2.nnic@NABP1	transcript7842.chr2.nnic	protein_coding	191678139,191678988,191681946,191682492,191684230,191685599	191678705,191679128,191682017,191683804,191684296,191686939	Gene ID= ENSG00000173559.12 TPM= 29.19 Transcript Type= NA
chr2	191678404	191689223	191678404	191689223	+	transcript7848.chr2.nnic@NABP1	transcript7848.chr2.nnic	protein_coding	191678404,191678988,191681946,191684230,191685599	191678705,191679128,191683804,191684296,191689223	Gene ID= ENSG00000173559.12 TPM= 3.5 Transcript Type= NA
chr2	191834302	191847255	191834302	191847255	-	ENST00000304141.4@CAVIN2	ENST00000304141.4	protein_coding	191846443,191834302	191847255,191836717	Gene ID= ENSG00000168497.4 TPM= 646.85 Transcript Type= protein_coding
chr2	195569633	195574501	195569633	195574501	-	transcript7853.chr2.nnic@LINC01827	transcript7853.chr2.nnic	lincRNA	195574324,195569633	195574501,195569862	Gene ID= ENSG00000234919.1 TPM= 3.5 Transcript Type= NA
chr2	195657226	195725074	195657226	195725074	+	transcript7855.chr2.nnic@SLC39A10	transcript7855.chr2.nnic	protein_coding	195657226,195680032,195683699,195706616,195708656,195713433,195714115,195716637,195718252,195724382	195657281,195681050,195683906,195706785,195708844,195713553,195714288,195717005,195718332,195725074	Gene ID= ENSG00000196950.13 TPM= 2.34 Transcript Type= NA
chr2	195656747	195737702	195656747	195737702	+	ENST00000409086.7@SLC39A10	ENST00000409086.7	protein_coding	195656747,195680032,195683699,195706616,195708656,195713433,195716637,195718252,195728159,195734883	195657010,195681050,195683906,195706785,195708844,195713553,195717005,195718332,195728349,195737702	Gene ID= ENSG00000196950.13 TPM= 4.09 Transcript Type= protein_coding
chr2	195657128	195737702	195657128	195737702	+	ENST00000359634.9@SLC39A10	ENST00000359634.9	protein_coding	195657128,195680032,195683699,195706616,195708656,195713433,195716637,195718252,195728159,195734883	195657281,195681050,195683906,195706785,195708844,195713553,195717005,195718332,195728349,195737702	Gene ID= ENSG00000196950.13 TPM= 33.28 Transcript Type= protein_coding
chr2	196150090	196153265	196150090	196153265	+	transcript7863.chr2.nnic@NA	transcript7863.chr2.nnic	NA	196150090	196153265	Gene ID= novel_gene_chr2_7864 TPM= 2.34 Transcript Type= NA
chr2	196199251	196362196	196199251	196362196	-	transcript7865.chr2.nic@HECW2	transcript7865.chr2.nic	protein_coding	196361812,196343657,196334424,196329575,196324980,196322478,196320339,196318552,196317274,196307935,196307130,196306488,196292565,196278528,196274021,196271193,196257823,196253920,196242084,196240449,196228102,196225772,196222211,196220795,196220039,196217008,196215865,196199251	196362196,196343764,196334518,196329650,196325149,196322620,196320439,196319904,196317369,196308085,196307233,196306612,196292750,196278662,196274123,196271289,196257906,196254029,196242204,196240562,196228254,196225870,196222340,196220941,196220153,196217093,196215977,196201388	Gene ID= ENSG00000138411.10 TPM= 10.51 Transcript Type= NA
chr2	196991748	197310736	196991748	197310736	-	transcript7900.chr2.nic@ANKRD44	transcript7900.chr2.nic	protein_coding	197310578,197187023,197147027,197136592,197125837,197125381,197122650,197121332,197110766,197099816,197089950,197088711,197086680,197083369,197081645,197078703,197025196,197013511,197008944,197007806,197005694,197001753,197000419,196998907,196998337,196995379,196991748	197310736,197187106,197147105,197136662,197126037,197125468,197122792,197121544,197110844,197099930,197090032,197088774,197086748,197083509,197081725,197078814,197025267,197013712,197009031,197007923,197005910,197001840,197000502,196999052,196998419,196995461,196993674	Gene ID= ENSG00000065413.18 TPM= 4.67 Transcript Type= NA
chr2	197389784	197435091	197389784	197435091	-	ENST00000335508.10@SF3B1	ENST00000335508.10	protein_coding	197434972,197423808,197421029,197420428,197418509,197416741,197409770,197408369,197407998,197405275,197405076,197403585,197402949,197402556,197401985,197401742,197401400,197400715,197400252,197400055,197398461,197397985,197396056,197392972,197389784	197435091,197423974,197421133,197420542,197418588,197416911,197410007,197408581,197408119,197405472,197405177,197403764,197403035,197402826,197402130,197401888,197401525,197400936,197400434,197400166,197398581,197398116,197396328,197393188,197392461	Gene ID= ENSG00000115524.15 TPM= 193.82 Transcript Type= protein_coding
chr2	197391980	197435056	197391980	197435056	-	transcript7911.chr2.nic@SF3B1	transcript7911.chr2.nic	protein_coding	197434972,197423808,197421029,197418509,197416741,197409770,197408369,197407998,197405275,197405076,197403585,197402949,197402556,197401985,197401742,197401400,197400715,197400252,197400055,197398461,197397985,197396056,197392972,197391980	197435056,197423974,197421133,197420542,197416911,197410007,197408581,197408119,197405472,197405177,197403764,197403035,197402826,197402130,197401888,197401525,197400936,197400434,197400166,197398581,197398116,197396328,197393188,197392461	Gene ID= ENSG00000115524.15 TPM= 35.61 Transcript Type= NA
chr2	197453423	197475308	197453423	197475308	+	ENST00000263960.6@COQ10B	ENST00000263960.6	protein_coding	197453423,197459932,197462539,197470070,197473757	197453664,197460081,197462731,197470171,197475308	Gene ID= ENSG00000115520.8 TPM= 65.39 Transcript Type= protein_coding
chr2	197486581	197500047	197486581	197500047	-	ENST00000388968.7@HSPD1	ENST00000388968.7	protein_coding	197499782,197498675,197497140,197495294,197494657,197494157,197493324,197490197,197489002,197488317,197487858,197486581	197500047,197498850,197497392,197495376,197494752,197494250,197493492,197490296,197489247,197488491,197488036,197487198	Gene ID= ENSG00000144381.16 TPM= 399.32 Transcript Type= protein_coding
chr2	197486586	197500274	197486586	197500274	-	ENST00000345042.6@HSPD1	ENST00000345042.6	protein_coding	197500160,197498675,197497140,197495294,197494657,197494157,197493324,197490197,197489002,197488317,197487858,197486586	197500274,197498850,197497392,197495376,197494752,197494250,197493492,197490296,197489247,197488491,197488036,197487198	Gene ID= ENSG00000144381.16 TPM= 8.17 Transcript Type= protein_coding
chr2	197499994	197503457	197499994	197503457	+	ENST00000233893.9@HSPE1	ENST00000233893.9	protein_coding	197499994,197501074,197503039,197503209	197500439,197501238,197503128,197503457	Gene ID= ENSG00000115541.10 TPM= 129.6 Transcript Type= protein_coding
chr2	197515832	197553699	197515832	197553699	+	ENST00000323303.8@MOB4	ENST00000323303.8	protein_coding	197515832,197523624,197535530,197540111,197540351,197548336,197550275,197550515	197516146,197523686,197535630,197540153,197540437,197548415,197550386,197553699	Gene ID= ENSG00000115540.14 TPM= 15.18 Transcript Type= protein_coding
chr2	197705369	197708387	197705369	197708387	+	ENST00000282276.7@MARS2	ENST00000282276.7	protein_coding	197705369	197708387	Gene ID= ENSG00000247626.4 TPM= 16.35 Transcript Type= protein_coding
chr2	199269500	199458096	199269500	199458096	-	ENST00000417098.5@SATB2	ENST00000417098.5	protein_coding	199457339,199455869,199433338,199381694,199380364,199368605,199348701,199328698,199323803,199308760,199269500	199458096,199456096,199433514,199381820,199380487,199368707,199349173,199328910,199323958,199308957,199272672	Gene ID= ENSG00000119042.16 TPM= 5.84 Transcript Type= protein_coding
chr2	199911256	199928273	199911256	199928273	+	ENST00000319974.5@C2orf69	ENST00000319974.5	protein_coding	199911256,199925062	199911771,199928273	Gene ID= ENSG00000178074.5 TPM= 60.71 Transcript Type= protein_coding
chr2	199929975	199955736	199929975	199955736	-	ENST00000483328.5@TYW5	ENST00000483328.5	protein_coding	199955393,199948337,199943765,199940089,199938933,199936405,199935931,199929975	199955736,199948472,199943834,199940133,199939070,199936492,199936047,199933323	Gene ID= ENSG00000162971.10 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr2	200306151	200478529	200306151	200478529	+	ENST00000409988.7@SPATS2L	ENST00000409988.7	protein_coding	200306151,200329431,200389223,200412311,200416379,200419250,200439122,200440649,200459769,200467290,200469914,200472832,200477636	200306601,200329480,200389283,200412419,200416428,200419496,200439328,200440784,200459827,200467399,200470016,200473052,200478529	Gene ID= ENSG00000196141.13 TPM= 5.45 Transcript Type= protein_coding
chr2	200306553	200478530	200306553	200478530	+	transcript7982.chr2.nic@SPATS2L	transcript7982.chr2.nic	protein_coding	200306553,200329431,200389223,200412311,200416379,200419250,200440649,200459769,200467290,200469914,200472832,200477636	200306922,200329480,200389283,200412419,200416428,200419496,200440784,200459827,200467399,200470016,200473052,200478530	Gene ID= ENSG00000196141.13 TPM= 121.92 Transcript Type= NA
chr2	200306524	200478530	200306524	200478530	+	ENST00000360760.9@SPATS2L	ENST00000360760.9	protein_coding	200306524,200329431,200389223,200412311,200416379,200419250,200440649,200459769,200467290,200469914,200472832,200477636	200306601,200329480,200389283,200412419,200416428,200419496,200440784,200459827,200467399,200470016,200473052,200478530	Gene ID= ENSG00000196141.13 TPM= 27.35 Transcript Type= protein_coding
chr2	200306708	200478530	200306708	200478530	+	ENST00000409140.7@SPATS2L	ENST00000409140.7	protein_coding	200306708,200329431,200389223,200412311,200416379,200419250,200439122,200440649,200459769,200467290,200469914,200472832,200477636	200306922,200329480,200389283,200412419,200416428,200419496,200439328,200440784,200459827,200467399,200470016,200473052,200478530	Gene ID= ENSG00000196141.13 TPM= 43.69 Transcript Type= protein_coding
chr2	200306718	200390868	200306718	200390868	+	ENST00000459656.5@SPATS2L	ENST00000459656.5	protein_coding	200306718,200329431,200389223	200306922,200329480,200390868	Gene ID= ENSG00000196141.13 TPM= 1.17 Transcript Type= retained_intron
chr2	200306701	200308249	200306701	200308249	+	transcript8003.chr2.nnic@NA	transcript8003.chr2.nnic	NA	200306701	200308249	Gene ID= novel_gene_chr2_8004 TPM= 2.34 Transcript Type= NA
chr2	200488952	200510063	200488952	200510063	-	ENST00000359878.7@KCTD18	ENST00000359878.7	protein_coding	200509628,200506857,200504748,200498891,200497753,200493172,200488952	200510063,200507091,200504959,200499084,200497847,200493274,200490616	Gene ID= ENSG00000155729.12 TPM= 19.27 Transcript Type= protein_coding
chr2	200488958	200510068	200488958	200510068	-	ENST00000409157.5@KCTD18	ENST00000409157.5	protein_coding	200510011,200506857,200504748,200498891,200497753,200493172,200488958	200510068,200507091,200504959,200499084,200497847,200493274,200490616	Gene ID= ENSG00000155729.12 TPM= 4.09 Transcript Type= protein_coding
chr2	200526157	200583782	200526157	200583782	+	ENST00000357799.8@SGO2	ENST00000357799.8	protein_coding	200526157,200532974,200534996,200536065,200542579,200569663,200571050,200575311,200583449	200526252,200533108,200535171,200536142,200542664,200569892,200573977,200575461,200583782	Gene ID= ENSG00000163535.17 TPM= 3.5 Transcript Type= protein_coding
chr2	200585868	200671495	200585868	200671495	+	ENST00000374700.6@AOX1	ENST00000374700.6	protein_coding	200585868,200593146,200595272,200597397,200599620,200602284,200603267,200604017,200604696,200605536,200608984,200609321,200611384,200612609,200613804,200615971,200620650,200621120,200623861,200627353,200634791,200636911,200638215,200641098,200642610,200650974,200656842,200659165,200659995,200661579,200662855,200666687,200668615,200669575,200670629	200586153,200593203,200595368,200597505,200599746,200602345,200603356,200604097,200604840,200605628,200609135,200609414,200611493,200612793,200613966,200616063,200620819,200621246,200623983,200627449,200634915,200637044,200638302,200641184,200642801,200651201,200656937,200659293,200660069,200661631,200662969,200666752,200668803,200669742,200671495	Gene ID= ENSG00000138356.13 TPM= 16.35 Transcript Type= protein_coding
chr2	200811540	200823837	200811540	200823837	+	transcript8016.chr2.nic@BZW1	transcript8016.chr2.nic	protein_coding	200811540,200813208,200815341,200815667,200816325,200817106,200817974,200818223,200818755,200819982,200821183,200822147	200811727,200813281,200815517,200815761,200816390,200817241,200818083,200818393,200818901,200820120,200821305,200823837	Gene ID= ENSG00000082153.17 TPM= 16.73 Transcript Type= NA
chr2	200811546	200827338	200811546	200827338	+	ENST00000409600.5@BZW1	ENST00000409600.5	protein_coding	200811546,200813208,200815341,200815667,200816325,200817106,200817974,200818223,200818755,200819982,200821183,200822147	200811990,200813281,200815517,200815761,200816390,200817241,200818083,200818393,200818901,200820120,200821305,200827338	Gene ID= ENSG00000082153.17 TPM= 28.02 Transcript Type= protein_coding
chr2	200853009	200864744	200853009	200864744	-	ENST00000621181.4@CLK1	ENST00000621181.4	protein_coding	200864564,200861702,200861238,200859680,200857973,200857718,200856891,200856682,200855004,200854616,200853903,200853009	200864744,200861862,200861466,200859747,200858089,200857884,200856985,200856811,200855086,200854695,200853993,200853449	Gene ID= ENSG00000013441.15 TPM= 1.17 Transcript Type= protein_coding
chr2	200853082	200864711	200853082	200864711	-	transcript8029.chr2.nnic@CLK1	transcript8029.chr2.nnic	protein_coding	200864564,200861702,200859680,200857973,200857718,200856891,200856682,200855004,200854616,200853903,200853082	200864711,200861862,200861466,200858089,200857884,200856985,200856811,200855086,200854717,200853993,200853449	Gene ID= ENSG00000013441.15 TPM= 2.34 Transcript Type= NA
chr2	200853081	200864691	200853081	200864691	-	ENST00000473565.5@CLK1	ENST00000473565.5	protein_coding	200864564,200861702,200859680,200857973,200857718,200856891,200856682,200855004,200854616,200853903,200853081	200864691,200861862,200861466,200858089,200857884,200856985,200856811,200855086,200854695,200853993,200853449	Gene ID= ENSG00000013441.15 TPM= 15.18 Transcript Type= retained_intron
chr2	200853081	200864656	200853081	200864656	-	ENST00000432425.5@CLK1	ENST00000432425.5	protein_coding	200864564,200861702,200861238,200859680,200857973,200857718,200856891,200856682,200855004,200854616,200853903,200853081	200864656,200861862,200861466,200859746,200858089,200857884,200856985,200856811,200855086,200854695,200853993,200853449	Gene ID= ENSG00000013441.15 TPM= 12.84 Transcript Type= nonsense_mediated_decay
chr2	200863284	200864650	200863284	200864650	+	transcript8038.chr2.nnic@NA	transcript8038.chr2.nnic	NA	200863284	200864650	Gene ID= novel_gene_chr2_8039 TPM= 3.5 Transcript Type= NA
chr2	200889351	200903925	200889351	200903925	+	transcript8046.chr2.nic@NIF3L1	transcript8046.chr2.nic	protein_coding	200889351,200891969,200893246,200895264,200897076,200899385,200903494	200889391,200892379,200893408,200895390,200897214,200899468,200903925	Gene ID= ENSG00000196290.14 TPM= 2.34 Transcript Type= NA
chr2	200889366	200903925	200889366	200903925	+	transcript8047.chr2.nnic@NIF3L1	transcript8047.chr2.nnic	protein_coding	200889366,200891918,200893246,200895264,200897076,200899385,200903494	200889391,200892379,200893408,200895390,200897214,200899468,200903925	Gene ID= ENSG00000196290.14 TPM= 7.01 Transcript Type= NA
chr2	200889385	200903930	200889385	200903930	+	ENST00000409020.5@NIF3L1	ENST00000409020.5	protein_coding	200889385,200891918,200893246,200895264,200897076,200899385,200903494	200889652,200892379,200893408,200895390,200897214,200899468,200903930	Gene ID= ENSG00000196290.14 TPM= 3.5 Transcript Type= protein_coding
chr2	200889366	200903925	200889366	200903925	+	transcript8051.chr2.nnic@NIF3L1	transcript8051.chr2.nnic	protein_coding	200889366,200891918,200893246,200895264,200899385,200903494	200889391,200892379,200893408,200895390,200899468,200903925	Gene ID= ENSG00000196290.14 TPM= 2.34 Transcript Type= NA
chr2	200889377	200903925	200889377	200903925	+	transcript8052.chr2.nic@NIF3L1	transcript8052.chr2.nic	protein_coding	200889377,200893246,200895264,200897076,200899385,200903494	200892379,200893408,200895390,200897214,200899468,200903925	Gene ID= ENSG00000196290.14 TPM= 7.01 Transcript Type= NA
chr2	200908973	200963680	200908973	200963680	-	ENST00000234296.6@ORC2	ENST00000234296.6	protein_coding	200963490,200959392,200958030,200957401,200949554,200942685,200941248,200937906,200935699,200933876,200931339,200926768,200925836,200920993,200920222,200913931,200913295,200908973	200963680,200959440,200958133,200957544,200949643,200942777,200941279,200937966,200935892,200933974,200931448,200926900,200925932,200921139,200920393,200913992,200913413,200911387	Gene ID= ENSG00000115942.8 TPM= 2.34 Transcript Type= protein_coding
chr2	200978465	201071665	200978465	201071665	-	transcript8069.chr2.nnic@FAM126B	transcript8069.chr2.nnic	protein_coding	201071610,201061307,201045496,201023959,201022831,201016991,201011392,201008973,200997445,200992887,200992281,200988262,200978465	201071665,201061424,201045593,201024039,201022932,201017170,201011472,201009088,200997540,200993003,200992368,200988421,200981871	Gene ID= ENSG00000155744.9 TPM= 4.67 Transcript Type= NA
chr2	200977478	200978570	200977478	200978570	+	transcript8083.chr2.nnic@NA	transcript8083.chr2.nnic	NA	200977478	200978570	Gene ID= novel_gene_chr2_8084 TPM= 3.5 Transcript Type= NA
chr2	201071739	201085750	201071739	201085750	+	ENST00000237889.8@NDUFB3	ENST00000237889.8	protein_coding	201071739,201078881,201085459	201072059,201079022,201085750	Gene ID= ENSG00000119013.8 TPM= 31.53 Transcript Type= protein_coding
chr2	201072030	201085750	201072030	201085750	+	ENST00000454214.1@NDUFB3	ENST00000454214.1	protein_coding	201072030,201072279,201078881,201085459	201072059,201072361,201079022,201085750	Gene ID= ENSG00000119013.8 TPM= 2.34 Transcript Type= protein_coding
chr2	201117751	201141598	201117751	201141598	+	transcript8115.chr2.nic@CFLAR	transcript8115.chr2.nic	protein_coding	201117751,201129729,201133029,201135972,201140357,201141374	201118901,201130146,201133134,201136107,201140439,201141598	Gene ID= ENSG00000003402.19 TPM= 16.15 Transcript Type= NA
chr2	201118523	201119177	201118523	201119177	+	ENST00000490965.1@CFLAR	ENST00000490965.1	protein_coding	201118523,201119028	201118901,201119177	Gene ID= ENSG00000003402.19 TPM= 1.17 Transcript Type= processed_transcript
chr2	201116167	201141598	201116167	201141598	+	ENST00000341222.10@CFLAR	ENST00000341222.10	protein_coding	201116167,201129729,201133029,201135972,201140357,201141374	201116481,201130146,201133134,201136107,201140439,201141598	Gene ID= ENSG00000003402.19 TPM= 6.42 Transcript Type= protein_coding
chr2	201117752	201120496	201117752	201120496	-	transcript8132.chr2.nnic@NA	transcript8132.chr2.nnic	NA	201117752	201120496	Gene ID= novel_gene_chr2_8133 TPM= 71.61 Transcript Type= NA
chr2	201120025	201129814	201120025	201129814	-	transcript8134.chr2.nnic@NA	transcript8134.chr2.nnic	NA	201120025	201129814	Gene ID= novel_gene_chr2_8135 TPM= 33.86 Transcript Type= NA
chr2	201153905	201156673	201153905	201156673	-	transcript8136.chr2.nnic@NA	transcript8136.chr2.nnic	NA	201153905	201156673	Gene ID= novel_gene_chr2_8137 TPM= 24.52 Transcript Type= NA
chr2	201171148	201172683	201171148	201172683	+	transcript8130.chr2.nnic@NA	transcript8130.chr2.nnic	NA	201171148	201172683	Gene ID= novel_gene_chr2_8131 TPM= 4.67 Transcript Type= NA
chr2	201182881	201221665	201182881	201221665	+	ENST00000286186.10@CASP10	ENST00000286186.10	protein_coding	201182881,201185771,201187706,201192984,201195842,201203730,201205882,201208075,201209070,201217588	201183308,201186124,201187799,201193119,201195948,201203766,201205973,201208183,201209562,201221665	Gene ID= ENSG00000003400.14 TPM= 1.17 Transcript Type= protein_coding
chr2	201233458	201287709	201233458	201287709	+	transcript8143.chr2.nic@CASP8	transcript8143.chr2.nic	protein_coding	201233458,201234016,201266461,201271516,201272638,201272898,201274889,201276827,201284816,201286459	201233622,201234112,201266791,201271621,201272776,201272942,201274953,201276968,201285317,201287709	Gene ID= ENSG00000064012.21 TPM= 4.88 Transcript Type= NA
chr2	201233443	201287709	201233443	201287709	+	transcript8144.chr2.nic@CASP8	transcript8144.chr2.nic	protein_coding	201233443,201234016,201266487,201271516,201272638,201274889,201276827,201284816,201286459	201233554,201234112,201266791,201271621,201272776,201274953,201276968,201285317,201287709	Gene ID= ENSG00000064012.21 TPM= 2.55 Transcript Type= NA
chr2	201233458	201287709	201233458	201287709	+	transcript8145.chr2.nic@CASP8	transcript8145.chr2.nic	protein_coding	201233458,201234016,201266461,201271516,201272638,201274889,201276827,201284816,201286459	201233622,201234112,201266791,201271621,201272776,201274953,201276968,201285317,201287709	Gene ID= ENSG00000064012.21 TPM= 2.55 Transcript Type= NA
chr2	201258035	201287709	201258035	201287709	+	transcript8149.chr2.nic@CASP8	transcript8149.chr2.nic	protein_coding	201258035,201266461,201271516,201272638,201272898,201274889,201276827,201284816,201286459	201258154,201266791,201271621,201272776,201272942,201274953,201276968,201285317,201287709	Gene ID= ENSG00000064012.21 TPM= 2.55 Transcript Type= NA
chr2	201258036	201287711	201258036	201287711	+	ENST00000358485.8@CASP8	ENST00000358485.8	protein_coding	201258036,201266461,201271516,201272638,201272898,201274889,201276827,201284816,201286459	201258382,201266791,201271621,201272776,201272942,201274953,201276968,201285317,201287711	Gene ID= ENSG00000064012.21 TPM= 2.55 Transcript Type= protein_coding
chr2	201260526	201287709	201260526	201287709	+	transcript8155.chr2.nic@CASP8	transcript8155.chr2.nic	protein_coding	201260526,201266461,201271516,201272638,201272898,201274889,201276827,201284816,201286459	201260613,201266791,201271621,201272776,201272942,201274953,201276968,201285317,201287709	Gene ID= ENSG00000064012.21 TPM= 13.05 Transcript Type= NA
chr2	201260526	201287709	201260526	201287709	+	transcript8156.chr2.nic@CASP8	transcript8156.chr2.nic	protein_coding	201260526,201266461,201271516,201272638,201272898,201274889,201276827,201284816,201286459	201260613,201266791,201271621,201272776,201272942,201274953,201277104,201285317,201287709	Gene ID= ENSG00000064012.21 TPM= 2.55 Transcript Type= NA
chr2	201258035	201287709	201258035	201287709	+	transcript8160.chr2.nic@CASP8	transcript8160.chr2.nic	protein_coding	201258035,201266461,201271516,201272638,201274889,201276827,201284816,201286459	201258154,201266791,201271621,201272776,201274953,201276968,201285317,201287709	Gene ID= ENSG00000064012.21 TPM= 2.55 Transcript Type= NA
chr2	201260500	201287709	201260500	201287709	+	ENST00000323492.11@CASP8	ENST00000323492.11	protein_coding	201260500,201266461,201271516,201272638,201274889,201276827,201284816,201286459	201260613,201266791,201271621,201272776,201274953,201276968,201285317,201287709	Gene ID= ENSG00000064012.21 TPM= 1.38 Transcript Type= protein_coding
chr2	201260534	201287709	201260534	201287709	+	transcript8166.chr2.nnic@CASP8	transcript8166.chr2.nnic	protein_coding	201260534,201271516,201272638,201272898,201274889,201276827,201284816,201286459	201260613,201271621,201272776,201272942,201274953,201276968,201285317,201287709	Gene ID= ENSG00000064012.21 TPM= 2.55 Transcript Type= NA
chr2	201233443	201242033	201233443	201242033	+	transcript8168.chr2.nic@CASP8	transcript8168.chr2.nic	protein_coding	201233443,201234016,201240270	201233554,201234112,201242033	Gene ID= ENSG00000064012.21 TPM= 4.67 Transcript Type= NA
chr2	201281646	201283492	201281646	201283492	-	transcript8174.chr2.nnic@NA	transcript8174.chr2.nnic	NA	201281646	201283492	Gene ID= novel_gene_chr2_8175 TPM= 2.34 Transcript Type= NA
chr2	201381587	201451646	201381587	201451646	-	transcript8181.chr2.nnic@TRAK2	transcript8181.chr2.nnic	protein_coding	201451350,201420417,201407403,201401018,201399377,201398145,201397502,201395314,201394798,201392909,201389801,201389300,201387703,201386218,201384111,201381587	201451646,201420706,201407597,201401094,201399493,201398354,201397580,201395444,201394872,201393046,201389880,201389503,201388001,201386484,201384216,201382265	Gene ID= ENSG00000115993.12 TPM= 2.34 Transcript Type= NA
chr2	201377207	201451579	201377207	201451579	-	ENST00000332624.7@TRAK2	ENST00000332624.7	protein_coding	201451350,201420417,201407403,201401018,201399377,201398145,201397502,201395314,201394798,201392909,201389801,201389300,201387703,201386218,201384111,201377207	201451579,201420706,201407597,201401094,201399493,201398354,201397580,201395444,201394872,201393046,201389880,201389503,201388001,201386484,201384216,201381218	Gene ID= ENSG00000115993.12 TPM= 39.7 Transcript Type= protein_coding
chr2	201451669	201480846	201451669	201480846	+	ENST00000194530.7@STRADB	ENST00000194530.7	protein_coding	201451669,201454746,201458784,201469953,201472955,201474647,201475619,201477619,201478087,201478357,201479489,201480032	201451938,201454852,201458864,201470052,201473076,201474755,201475742,201477790,201478191,201478601,201479531,201480846	Gene ID= ENSG00000082146.12 TPM= 38.53 Transcript Type= protein_coding
chr2	201451719	201480846	201451719	201480846	+	transcript8195.chr2.nic@STRADB	transcript8195.chr2.nic	protein_coding	201451719,201454746,201458784,201469953,201472955,201474647,201475619,201477619,201478087,201478357	201451938,201454852,201458864,201470052,201473076,201474755,201475742,201477790,201478191,201480846	Gene ID= ENSG00000082146.12 TPM= 2.34 Transcript Type= NA
chr2	201451719	201480713	201451719	201480713	+	transcript8198.chr2.nic@STRADB	transcript8198.chr2.nic	protein_coding	201451719,201454746,201458784,201469953,201472955,201474647,201475619,201477619,201478087	201451938,201454852,201458864,201470052,201473076,201474755,201475742,201477790,201480713	Gene ID= ENSG00000082146.12 TPM= 2.34 Transcript Type= NA
chr2	201620184	201642944	201620184	201642944	-	ENST00000409444.6@TMEM237	ENST00000409444.6	protein_coding	201642609,201640893,201640261,201638989,201636748,201633311,201632051,201629729,201629230,201628076,201627321,201626026,201620184	201642944,201640924,201640265,201639045,201636885,201633431,201632208,201629852,201629421,201628149,201627414,201626147,201624322	Gene ID= ENSG00000155755.18 TPM= 1.17 Transcript Type= protein_coding
chr2	201620184	201643517	201620184	201643517	-	ENST00000409883.6@TMEM237	ENST00000409883.6	protein_coding	201643359,201640893,201640261,201638989,201636748,201633311,201632051,201629729,201629230,201628076,201627321,201626026,201620184	201643517,201640924,201640265,201639045,201636885,201633431,201632208,201629852,201629421,201628149,201627414,201626147,201624322	Gene ID= ENSG00000155755.18 TPM= 3.5 Transcript Type= protein_coding
chr2	201623700	201642692	201623700	201642692	-	ENST00000621467.4@TMEM237	ENST00000621467.4	protein_coding	201642609,201640893,201638989,201636748,201633311,201632051,201629729,201629230,201628076,201627321,201626026,201623700	201642692,201640924,201639050,201636885,201633431,201632208,201629852,201629421,201628149,201627414,201626147,201624322	Gene ID= ENSG00000155755.18 TPM= 1.17 Transcript Type= protein_coding
chr2	201623756	201643484	201623756	201643484	-	ENST00000286196.9@TMEM237	ENST00000286196.9	protein_coding	201643359,201640893,201638989,201636748,201633311,201632051,201629729,201629230,201628076,201627321,201626026,201623756	201643484,201640924,201639045,201636885,201633431,201632208,201629852,201629421,201628149,201627414,201626147,201624322	Gene ID= ENSG00000155755.18 TPM= 7.01 Transcript Type= nonsense_mediated_decay
chr2	201700554	201781189	201700554	201781189	-	ENST00000264276.10@ALS2	ENST00000264276.10	protein_coding	201780877,201768866,201767229,201760881,201757402,201754503,201753146,201749712,201746566,201744258,201741674,201738670,201733276,201729052,201728512,201727705,201727212,201726664,201726484,201725356,201724295,201723330,201723043,201718077,201715672,201710991,201709881,201707869,201706846,201705416,201705139,201704454,201704122,201700554	201781189,201768945,201767383,201761818,201757759,201754671,201753242,201749789,201746748,201744429,201741854,201738735,201733438,201729183,201728640,201727775,201727278,201726866,201726549,201725454,201724459,201723441,201723120,201718210,201715839,201711108,201710038,201707991,201707022,201705461,201705200,201704603,201704218,201701889	Gene ID= ENSG00000003393.14 TPM= 7.01 Transcript Type= protein_coding
chr2	201741184	201780956	201741184	201780956	-	ENST00000482789.5@ALS2	ENST00000482789.5	protein_coding	201780877,201768866,201767229,201760881,201757402,201754503,201753146,201749712,201746566,201744258,201741184	201780956,201768945,201767383,201761818,201757759,201754671,201753242,201749789,201746748,201744429,201741854	Gene ID= ENSG00000003393.14 TPM= 1.75 Transcript Type= retained_intron
chr2	201759457	201780956	201759457	201780956	-	ENST00000467448.5@ALS2	ENST00000467448.5	protein_coding	201780877,201768866,201767229,201759457	201780956,201768945,201767383,201761818	Gene ID= ENSG00000003393.14 TPM= 5.25 Transcript Type= protein_coding
chr2	201873860	201875690	201873860	201875690	+	transcript8223.chr2.nnic@NA	transcript8223.chr2.nnic	NA	201873860	201875690	Gene ID= novel_gene_chr2_8224 TPM= 2.34 Transcript Type= NA
chr2	202034587	202038445	202034587	202038445	+	ENST00000286201.2@FZD7	ENST00000286201.2	protein_coding	202034587	202038445	Gene ID= ENSG00000155760.2 TPM= 46.7 Transcript Type= protein_coding
chr2	202206180	202238608	202206180	202238608	-	ENST00000392246.6@SUMO1	ENST00000392246.6	protein_coding	202238440,202220032,202214357,202210735,202206180	202238608,202220106,202214434,202210806,202207321	Gene ID= ENSG00000116030.16 TPM= 21.02 Transcript Type= protein_coding
chr2	202265716	202303666	202265716	202303666	+	ENST00000264279.9@NOP58	ENST00000264279.9	protein_coding	202265716,202275113,202277950,202282351,202284345,202287660,202290323,202291125,202292777,202295674,202297379,202297845,202300234,202302921,202303386	202265986,202275189,202278002,202282472,202284481,202287724,202290457,202291270,202292903,202295837,202297513,202297906,202300367,202303057,202303666	Gene ID= ENSG00000055044.10 TPM= 21.02 Transcript Type= protein_coding
chr2	202434750	202437628	202434750	202437628	-	transcript8261.chr2.nnic@NA	transcript8261.chr2.nnic	NA	202434750	202437628	Gene ID= novel_gene_chr2_8262 TPM= 2.34 Transcript Type= NA
chr2	202553659	202555969	202553659	202555969	-	transcript8263.chr2.nnic@NA	transcript8263.chr2.nnic	NA	202553659	202555969	Gene ID= novel_gene_chr2_8264 TPM= 2.34 Transcript Type= NA
chr2	202634947	202769757	202634947	202769757	+	transcript8265.chr2.nnic@FAM117B	transcript8265.chr2.nnic	protein_coding	202634947,202635617,202695881,202724917,202726250,202755538,202757213,202759233,202765446	202635347,202635788,202696032,202725009,202726363,202755681,202757438,202759353,202769757	Gene ID= ENSG00000138439.11 TPM= 10.51 Transcript Type= NA
chr2	202874782	202912226	202874782	202912226	-	ENST00000261015.4@WDR12	ENST00000261015.4	protein_coding	202911436,202907865,202901025,202899531,202897300,202896065,202894581,202892617,202884395,202884198,202883609,202882711,202874782	202912226,202907959,202901119,202899637,202897415,202896219,202894626,202892702,202884535,202884303,202883741,202882783,202880937	Gene ID= ENSG00000138442.9 TPM= 3.5 Transcript Type= protein_coding
chr2	203180956	203191335	203180956	203191335	+	ENST00000460355.1@NBEAL1	ENST00000460355.1	protein_coding	203180956,203188472,203190292	203183388,203188589,203191335	Gene ID= ENSG00000144426.18 TPM= 23.35 Transcript Type= retained_intron
chr2	203220358	203225174	203220358	203225174	+	transcript8296.chr2.nnic@NA	transcript8296.chr2.nnic	NA	203220358	203225174	Gene ID= novel_gene_chr2_8297 TPM= 2.34 Transcript Type= NA
chr2	203238214	203239281	203238214	203239281	-	transcript8359.chr2.nnic@NA	transcript8359.chr2.nnic	NA	203238214	203239281	Gene ID= novel_gene_chr2_8360 TPM= 2.34 Transcript Type= NA
chr2	203238940	203297345	203238940	203297345	+	ENST00000356079.8@CYP20A1	ENST00000356079.8	protein_coding	203238940,203245846,203246755,203251967,203266514,203272670,203278573,203280059,203285612,203289765,203292262,203296474,203296758	203239134,203245895,203246921,203252109,203266681,203272748,203278688,203280113,203285732,203289876,203292326,203296563,203297345	Gene ID= ENSG00000119004.15 TPM= 1.17 Transcript Type= protein_coding
chr2	203239019	203298551	203239019	203298551	+	transcript8327.chr2.nic@CYP20A1	transcript8327.chr2.nic	protein_coding	203239019,203245846,203246755,203251967,203266514,203280059,203285612,203289765,203292262,203296474,203296758	203239134,203245895,203246921,203252109,203266681,203280113,203285732,203289876,203292326,203296563,203298551	Gene ID= ENSG00000119004.15 TPM= 2.34 Transcript Type= NA
chr2	203238982	203297226	203238982	203297226	+	ENST00000429815.6@CYP20A1	ENST00000429815.6	protein_coding	203238982,203245846,203246755,203251967,203266514,203272646,203278573,203280059,203285612,203289765,203292262,203296474,203296758	203239134,203245895,203246921,203252109,203266681,203272748,203278688,203280113,203285732,203289876,203292326,203296563,203297226	Gene ID= ENSG00000119004.15 TPM= 5.84 Transcript Type= protein_coding
chr2	203238982	203297014	203238982	203297014	+	ENST00000461371.5@CYP20A1	ENST00000461371.5	protein_coding	203238982,203251967,203266514,203272670,203278573,203280059,203285612,203289765,203292262,203296474,203296758	203239134,203252109,203266681,203272748,203278688,203280113,203285732,203289876,203292326,203296563,203297014	Gene ID= ENSG00000119004.15 TPM= 1.17 Transcript Type= processed_transcript
chr2	203243687	203245565	203243687	203245565	-	transcript8355.chr2.nnic@NA	transcript8355.chr2.nnic	NA	203243687	203245565	Gene ID= novel_gene_chr2_8356 TPM= 3.5 Transcript Type= NA
chr2	203301916	203302934	203301916	203302934	-	transcript8357.chr2.nnic@NA	transcript8357.chr2.nnic	NA	203301916	203302934	Gene ID= novel_gene_chr2_8358 TPM= 5.84 Transcript Type= NA
chr2	203328260	203432172	203328260	203432172	+	transcript8347.chr2.nic@ABI2	transcript8347.chr2.nic	protein_coding	203328260,203366877,203380208,203391046,203394700,203395656,203402576,203416908,203427177	203328631,203367044,203380384,203391143,203394846,203395780,203402734,203417081,203432172	Gene ID= ENSG00000138443.15 TPM= 7.59 Transcript Type= NA
chr2	203328280	203432173	203328280	203432173	+	ENST00000261017.9@ABI2	ENST00000261017.9	protein_coding	203328280,203366877,203380208,203391046,203394700,203395656,203402576,203411285,203416908,203427177	203328631,203367044,203380384,203391143,203394846,203395780,203402734,203411371,203417081,203432173	Gene ID= ENSG00000138443.15 TPM= 9.92 Transcript Type= protein_coding
chr2	203433816	203441001	203433816	203441001	-	transcript8361.chr2.nnic@NA	transcript8361.chr2.nnic	NA	203433816	203441001	Gene ID= novel_gene_chr2_8362 TPM= 16.35 Transcript Type= NA
chr2	203489520	203535463	203489520	203535463	-	transcript8365.chr2.nic@RAPH1	transcript8365.chr2.nic	protein_coding	203535111,203495234,203491214,203489520	203535463,203495353,203491319,203490089	Gene ID= ENSG00000173166.17 TPM= 3.5 Transcript Type= NA
chr2	203706548	203738912	203706548	203738912	+	ENST00000324106.8@CD28	ENST00000324106.8	protein_coding	203706548,203726633,203729648,203734784	203706748,203726989,203729772,203738912	Gene ID= ENSG00000178562.17 TPM= 1.17 Transcript Type= protein_coding
chr2	203931965	203940895	203931965	203940895	-	transcript8374.chr2.nnic@NA	transcript8374.chr2.nnic	NA	203940517,203937317,203936108,203931965	203940895,203937388,203936201,203932497	Gene ID= novel_gene_chr2_8375 TPM= 2.34 Transcript Type= NA
chr2	203936748	203961577	203936748	203961577	+	ENST00000316386.10@ICOS	ENST00000316386.10	protein_coding	203936748,203955636,203956659,203957799,203959586	203936872,203955971,203956765,203957883,203961577	Gene ID= ENSG00000163600.12 TPM= 2.34 Transcript Type= protein_coding
chr2	204545455	204688597	204545455	204688597	+	transcript8376.chr2.nic@PARD3B	transcript8376.chr2.nic	protein_coding	204545455,204686181	204546119,204688597	Gene ID= ENSG00000116117.17 TPM= 2.34 Transcript Type= NA
chr2	205682500	205798133	205682500	205798133	+	ENST00000360409.7@NRP2	ENST00000360409.7	protein_coding	205682500,205697544,205716193,205722478,205723785,205725913,205727891,205740519,205743203,205745746,205749725,205752835,205763674,205765474,205766783,205792235,205794754	205683363,205697721,205716374,205722708,205723940,205726082,205728046,205740663,205743552,205745890,205749841,205752975,205763936,205765570,205766818,205792285,205798133	Gene ID= ENSG00000118257.16 TPM= 11.68 Transcript Type= protein_coding
chr2	205994325	205998470	205994325	205998470	+	transcript8388.chr2.nnic@NA	transcript8388.chr2.nnic	NA	205994325	205998470	Gene ID= novel_gene_chr2_8389 TPM= 22.18 Transcript Type= NA
chr2	206040154	206042692	206040154	206042692	+	transcript8395.chr2.nnic@NA	transcript8395.chr2.nnic	NA	206040154	206042692	Gene ID= novel_gene_chr2_8396 TPM= 2.34 Transcript Type= NA
chr2	206085739	206086851	206085739	206086851	+	transcript8397.chr2.nnic@NA	transcript8397.chr2.nnic	NA	206085739	206086851	Gene ID= novel_gene_chr2_8398 TPM= 2.34 Transcript Type= NA
chr2	206114817	206159603	206114817	206159603	-	ENST00000233190.10@NDUFS1	ENST00000233190.10	protein_coding	206159341,206153618,206152419,206149818,206149020,206147753,206147531,206146903,206144892,206144018,206142686,206141941,206138485,206132945,206130088,206127797,206126710,206126539,206114817	206159603,206153682,206152510,206149925,206149096,206147834,206147661,206147088,206145026,206144132,206142831,206142069,206138614,206133105,206130242,206127972,206126844,206126611,206124276	Gene ID= ENSG00000023228.13 TPM= 22.18 Transcript Type= protein_coding
chr2	206159585	206162928	206159585	206162928	+	ENST00000236957.9@EEF1B2	ENST00000236957.9	protein_coding	206159585,206159959,206160588,206161346,206162038,206162489,206162729	206159684,206160059,206160710,206161472,206162104,206162614,206162928	Gene ID= ENSG00000114942.13 TPM= 9.34 Transcript Type= protein_coding
chr2	206159605	206162928	206159605	206162928	+	ENST00000392222.6@EEF1B2	ENST00000392222.6	protein_coding	206159605,206160588,206161346,206162038,206162489,206162729	206160059,206160710,206161472,206162104,206162614,206162928	Gene ID= ENSG00000114942.13 TPM= 228.85 Transcript Type= protein_coding
chr2	206765357	206792509	206765357	206792509	+	ENST00000236980.10@FASTKD2	ENST00000236980.10	protein_coding	206765357,206766644,206770091,206771182,206771894,206772181,206774225,206786733,206787937,206788819,206790572,206791683	206765654,206767470,206770194,206771290,206772017,206772320,206774397,206786899,206788155,206788903,206790686,206792509	Gene ID= ENSG00000118246.13 TPM= 10.51 Transcript Type= protein_coding
chr2	206765432	206791889	206765432	206791889	+	ENST00000402774.7@FASTKD2	ENST00000402774.7	protein_coding	206765432,206766644,206770091,206771182,206771894,206772181,206774225,206786733,206787937,206788819,206790572,206791683	206765747,206767470,206770194,206771290,206772017,206772320,206774397,206786899,206788155,206788903,206790686,206791889	Gene ID= ENSG00000118246.13 TPM= 10.51 Transcript Type= protein_coding
chr2	206765606	206791806	206765606	206791806	+	ENST00000403094.3@FASTKD2	ENST00000403094.3	protein_coding	206765606,206766644,206770091,206771182,206771894,206772181,206774225,206786733,206787937,206788819,206790572,206791683	206765762,206767470,206770194,206771290,206772017,206772320,206774397,206786899,206788155,206788903,206790686,206791806	Gene ID= ENSG00000118246.13 TPM= 4.67 Transcript Type= protein_coding
chr2	207079090	207167267	207079090	207167267	-	transcript8446.chr2.nnic@KLF7	transcript8446.chr2.nnic	protein_coding	207167140,207165467,207123774,207088458,207079090	207167267,207165706,207124404,207088581,207081264	Gene ID= ENSG00000118263.14 TPM= 3.12 Transcript Type= NA
chr2	207074137	207134137	207074137	207134137	-	ENST00000412414.6@KLF7	ENST00000412414.6	protein_coding	207134067,207123774,207088458,207074137	207134137,207124404,207088581,207081264	Gene ID= ENSG00000118263.14 TPM= 7.79 Transcript Type= protein_coding
chr2	207079090	207167246	207079090	207167246	-	ENST00000421199.5@KLF7	ENST00000421199.5	protein_coding	207167140,207123774,207088458,207079090	207167246,207124404,207088581,207081264	Gene ID= ENSG00000118263.14 TPM= 14.79 Transcript Type= protein_coding
chr2	207141503	207144180	207141503	207144180	+	transcript8450.chr2.nnic@NA	transcript8450.chr2.nnic	NA	207141503	207144180	Gene ID= novel_gene_chr2_8451 TPM= 2.34 Transcript Type= NA
chr2	207529892	207603431	207529892	207603431	+	ENST00000432329.6@CREB1	ENST00000432329.6	protein_coding	207529892,207555628,207560226,207561119,207567463,207570179,207575272,207577505,207596914	207530134,207555749,207560372,207561160,207567563,207570321,207575454,207577655,207603431	Gene ID= ENSG00000118260.14 TPM= 6.42 Transcript Type= protein_coding
chr2	207529912	207603431	207529912	207603431	+	ENST00000353267.7@CREB1	ENST00000353267.7	protein_coding	207529912,207555628,207560226,207567463,207570179,207575272,207577505,207596914	207530134,207555749,207560372,207567563,207570321,207575454,207577655,207603431	Gene ID= ENSG00000118260.14 TPM= 5.25 Transcript Type= protein_coding
chr2	207571024	207577200	207571024	207577200	-	transcript8490.chr2.nnic@NA	transcript8490.chr2.nnic	NA	207571024	207577200	Gene ID= novel_gene_chr2_8491 TPM= 5.84 Transcript Type= NA
chr2	207581353	207625331	207581353	207625331	-	ENST00000458426.5@METTL21A	ENST00000458426.5	protein_coding	207625062,207624229,207621806,207581353	207625331,207624404,207621917,207582160	Gene ID= ENSG00000144401.14 TPM= 1.17 Transcript Type= protein_coding
chr2	207612743	207625378	207612743	207625378	-	ENST00000406927.6@METTL21A	ENST00000406927.6	protein_coding	207625265,207624229,207621806,207612743	207625378,207624404,207621917,207613443	Gene ID= ENSG00000144401.14 TPM= 1.17 Transcript Type= protein_coding
chr2	207612843	207624566	207612843	207624566	-	ENST00000426075.5@METTL21A	ENST00000426075.5	protein_coding	207624229,207621806,207612843	207624566,207621917,207613443	Gene ID= ENSG00000144401.14 TPM= 1.17 Transcript Type= protein_coding
chr2	207662375	207667024	207662375	207667024	+	ENST00000429730.1@LINC01857	ENST00000429730.1	lincRNA	207662375,207666681	207662522,207667024	Gene ID= ENSG00000224137.1 TPM= 3.5 Transcript Type= lincRNA
chr2	207711686	207756174	207711686	207756174	+	ENST00000295414.7@CCNYL1	ENST00000295414.7	protein_coding	207711686,207724800,207726842,207733947,207737411,207740655,207742223,207747047,207750957,207753588	207712116,207724874,207726876,207734047,207737446,207740706,207742342,207747213,207751119,207756174	Gene ID= ENSG00000163249.11 TPM= 7.01 Transcript Type= protein_coding
chr2	207762586	207769563	207762586	207769563	-	ENST00000295417.3@FZD5	ENST00000295417.3	protein_coding	207769265,207762586	207769563,207768994	Gene ID= ENSG00000163251.3 TPM= 145.95 Transcript Type= protein_coding
chr2	208236227	208255133	208236227	208255133	-	ENST00000345146.6@IDH1	ENST00000345146.6	protein_coding	208254939,208253886,208251430,208248369,208245319,208243427,208241994,208239863,208239071,208236227	208255133,208253959,208251567,208248660,208245424,208243604,208242145,208240003,208239233,208237169	Gene ID= ENSG00000138413.13 TPM= 214.84 Transcript Type= protein_coding
chr2	208236232	208254458	208236232	208254458	-	ENST00000446179.5@IDH1	ENST00000446179.5	protein_coding	208254343,208253886,208251430,208248369,208245319,208243427,208241994,208239863,208239071,208236232	208254458,208253959,208251567,208248660,208245424,208243604,208242145,208240003,208239233,208237169	Gene ID= ENSG00000138413.13 TPM= 3.5 Transcript Type= protein_coding
chr2	208255247	208256181	208255247	208256181	+	ENST00000440574.1@IDH1-AS1	ENST00000440574.1	antisense_RNA	208255247,208255903	208255431,208256181	Gene ID= ENSG00000231908.1 TPM= 1.17 Transcript Type= antisense_RNA
chr2	209424046	209734118	209424046	209734118	+	transcript8524.chr2.nnic@MAP2	transcript8524.chr2.nnic	protein_coding	209424046,209480969,209507592,209580036,209625053,209653142,209678572,209680750,209700277,209705580,209709914,209723595,209725709,209729850,209730182	209424276,209481352,209507641,209580100,209625129,209653432,209678685,209680827,209700338,209705727,209710254,209723687,209725790,209729962,209734118	Gene ID= ENSG00000078018.19 TPM= 3.5 Transcript Type= NA
chr2	209424046	209734118	209424046	209734118	+	transcript8527.chr2.nic@MAP2	transcript8527.chr2.nic	protein_coding	209424046,209507592,209580036,209625053,209653142,209678572,209680750,209700277,209705580,209709914,209723595,209725709,209729850,209730182	209424276,209507641,209580100,209625129,209653432,209678685,209680827,209700338,209705727,209710254,209723687,209725790,209729962,209734118	Gene ID= ENSG00000078018.19 TPM= 8.17 Transcript Type= NA
chr2	209424046	209734118	209424046	209734118	+	transcript8528.chr2.nnic@MAP2	transcript8528.chr2.nnic	protein_coding	209424046,209580036,209625053,209653142,209678572,209680750,209700277,209705580,209709914,209723595,209725709,209729850,209730182	209424276,209580100,209625129,209653432,209678685,209680827,209700338,209705727,209710254,209723687,209725790,209729962,209734118	Gene ID= ENSG00000078018.19 TPM= 4.67 Transcript Type= NA
chr2	209424058	209730518	209424058	209730518	+	ENST00000199940.10@MAP2	ENST00000199940.10	protein_coding	209424058,209507592,209580036,209625053,209653142,209678572,209680750,209700277,209704450,209705580,209709914,209723595,209725709,209729850,209730182	209424276,209507641,209580100,209625129,209653432,209678685,209680827,209700338,209704620,209705727,209710254,209723687,209725790,209729962,209730518	Gene ID= ENSG00000078018.19 TPM= 2.34 Transcript Type= protein_coding
chr2	210002565	210021576	210002565	210021576	+	ENST00000359429.10@RPE	ENST00000359429.10	protein_coding	210002565,210009657,210015973,210016507,210017473,210019669	210002783,210009736,210016112,210016641,210017559,210021576	Gene ID= ENSG00000197713.14 TPM= 38.53 Transcript Type= protein_coding
chr2	210002657	210019961	210002657	210019961	+	ENST00000435437.2@RPE	ENST00000435437.2	protein_coding	210002657,210009657,210015973,210016507,210017473,210019673	210002783,210009736,210016112,210016641,210017559,210019961	Gene ID= ENSG00000197713.14 TPM= 1.17 Transcript Type= protein_coding
chr2	210017735	210023157	210017735	210023157	-	transcript8556.chr2.nnic@NA	transcript8556.chr2.nnic	NA	210017735	210023157	Gene ID= novel_gene_chr2_8557 TPM= 30.36 Transcript Type= NA
chr2	210149006	210151122	210149006	210151122	-	transcript8558.chr2.nnic@NA	transcript8558.chr2.nnic	NA	210149006	210151122	Gene ID= novel_gene_chr2_8559 TPM= 3.5 Transcript Type= NA
chr2	210187939	210225491	210187939	210225491	-	ENST00000233710.3@ACADL	ENST00000233710.3	protein_coding	210225187,210220647,210217965,210216347,210210196,210205632,210204581,210203331,210195211,210192804,210187939	210225491,210220802,210218102,210216511,210210262,210205796,210204682,210203444,210195338,210192890,210189054	Gene ID= ENSG00000115361.7 TPM= 2.34 Transcript Type= protein_coding
chr2	210187990	210225389	210187990	210225389	-	transcript8563.chr2.nic@ACADL	transcript8563.chr2.nic	protein_coding	210224315,210220647,210217965,210216347,210210196,210205632,210204581,210203331,210195211,210192804,210187990	210225389,210220802,210218102,210216511,210210262,210205796,210204682,210203444,210195338,210192890,210189054	Gene ID= ENSG00000115361.7 TPM= 3.5 Transcript Type= NA
chr2	210187990	210225451	210187990	210225451	-	transcript8567.chr2.nic@ACADL	transcript8567.chr2.nic	protein_coding	210225187,210220647,210216347,210210196,210205632,210204581,210203331,210195211,210192804,210187990	210225451,210220802,210218102,210210262,210205796,210204682,210203444,210195338,210192890,210189054	Gene ID= ENSG00000115361.7 TPM= 2.34 Transcript Type= NA
chr2	210431249	210476767	210431249	210476767	-	ENST00000450366.6@LANCL1	ENST00000450366.6	protein_coding	210476620,210476316,210471959,210455107,210441308,210440598,210437690,210436216,210435387,210431249	210476767,210476412,210472076,210455314,210441443,210440744,210437872,210436392,210435459,210434563	Gene ID= ENSG00000115365.11 TPM= 45.54 Transcript Type= protein_coding
chr2	210431249	210477584	210431249	210477584	-	transcript8574.chr2.nic@LANCL1	transcript8574.chr2.nic	protein_coding	210477450,210476316,210471959,210455107,210441308,210440598,210437690,210436216,210435387,210431249	210477584,210476412,210472076,210455314,210441443,210440744,210437872,210436392,210435459,210434563	Gene ID= ENSG00000115365.11 TPM= 4.67 Transcript Type= NA
chr2	210431249	210476739	210431249	210476739	-	ENST00000443314.5@LANCL1	ENST00000443314.5	protein_coding	210476316,210471959,210455107,210441308,210440598,210437690,210436216,210435387,210431249	210476739,210472076,210455314,210441443,210440744,210437872,210436392,210435459,210434563	Gene ID= ENSG00000115365.11 TPM= 3.5 Transcript Type= protein_coding
chr2	210431249	210476757	210431249	210476757	-	ENST00000441020.7@LANCL1	ENST00000441020.7	protein_coding	210476709,210476316,210471959,210455107,210441308,210440598,210437690,210436216,210435387,210431249	210476757,210476412,210472076,210455314,210441443,210440744,210437872,210436392,210435459,210434563	Gene ID= ENSG00000115365.11 TPM= 19.85 Transcript Type= protein_coding
chr2	211375717	212538841	211375717	212538841	-	ENST00000342788.8@ERBB4	ENST00000342788.8	protein_coding	212538449,212124752,211947430,211788025,211750639,211725076,211722393,211713535,211712050,211705318,211704104,211701967,211679052,211673164,211665323,211657754,211630462,211623922,211619177,211561903,211430945,211428408,211424155,211422007,211420441,211387945,211386853,211375717	212538841,212124903,211947616,211788159,211750704,211725194,211722534,211713648,211712176,211705391,211704194,211702166,211679184,211673257,211665477,211657828,211630594,211624044,211619275,211562088,211431100,211428483,211424301,211422104,211420611,211387992,211387150,211384060	Gene ID= ENSG00000178568.14 TPM= 9.34 Transcript Type= protein_coding
chr2	211381881	212124906	211381881	212124906	-	transcript8578.chr2.nnic@ERBB4	transcript8578.chr2.nnic	protein_coding	212124752,211947430,211788025,211750639,211722393,211713535,211712050,211705318,211704104,211701967,211679052,211673164,211665323,211657754,211630462,211623922,211619177,211561903,211430945,211428408,211424155,211422007,211420441,211386853,211381881	212124906,211947616,211788161,211750704,211722534,211713648,211712178,211705391,211704194,211702166,211679186,211673259,211665477,211657828,211630594,211624046,211619275,211562090,211431100,211428483,211424301,211422104,211420611,211387150,211384060	Gene ID= ENSG00000178568.14 TPM= 4.67 Transcript Type= NA
chr2	211946577	212124906	211946577	212124906	-	transcript8580.chr2.nic@ERBB4	transcript8580.chr2.nic	protein_coding	212124752,211946577	212124906,211947616	Gene ID= ENSG00000178568.14 TPM= 4.67 Transcript Type= NA
chr2	211928599	211934939	211928599	211934939	+	transcript8581.chr2.nnic@NA	transcript8581.chr2.nnic	NA	211928599	211934939	Gene ID= novel_gene_chr2_8582 TPM= 3.5 Transcript Type= NA
chr2	212340286	212345275	212340286	212345275	+	transcript8583.chr2.nnic@NA	transcript8583.chr2.nnic	NA	212340286	212345275	Gene ID= novel_gene_chr2_8584 TPM= 3.5 Transcript Type= NA
chr2	212536915	212539198	212536915	212539198	+	transcript8585.chr2.nnic@NA	transcript8585.chr2.nnic	NA	212536915	212539198	Gene ID= novel_gene_chr2_8586 TPM= 16.35 Transcript Type= NA
chr2	213151914	213153645	213151914	213153645	+	transcript8587.chr2.nnic@NA	transcript8587.chr2.nnic	NA	213151914	213153645	Gene ID= novel_gene_chr2_8588 TPM= 4.67 Transcript Type= NA
chr2	213284392	213317978	213284392	213317978	+	ENST00000432529.6@SPAG16	ENST00000432529.6	protein_coding	213284392,213296064,213297262,213310059,213317219	213284619,213296110,213297357,213310177,213317978	Gene ID= ENSG00000144451.18 TPM= 16.35 Transcript Type= protein_coding
chr2	214725646	214809704	214725646	214809704	-	ENST00000260947.8@BARD1	ENST00000260947.8	protein_coding	214809412,214797061,214792297,214780560,214769232,214767482,214752447,214745722,214745067,214730411,214725646	214809704,214797117,214792445,214781509,214769312,214767654,214752555,214745854,214745159,214730508,214729008	Gene ID= ENSG00000138376.10 TPM= 4.67 Transcript Type= protein_coding
chr2	215311817	215349763	215311817	215349763	+	ENST00000236959.13@ATIC	ENST00000236959.13	protein_coding	215311817,215312498,215318157,215319665,215325241,215325987,215326822,215332382,215333350,215334919,215336035,215338779,215344779,215346759,215349094,215349536	215312161,215312624,215318233,215319731,215325329,215326138,215326978,215332507,215333457,215335004,215336124,215338907,215344871,215346941,215349249,215349763	Gene ID= ENSG00000138363.14 TPM= 47.87 Transcript Type= protein_coding
chr2	215312072	215349763	215312072	215349763	+	ENST00000443953.5@ATIC	ENST00000443953.5	protein_coding	215312072,215312498,215318157,215319665,215325241,215325987,215326822,215332382,215333350,215334919,215336035,215338779,215344779,215346759,215349094,215349536	215312390,215312624,215318233,215319731,215325329,215326138,215326978,215332507,215333457,215335004,215336124,215338907,215344871,215346941,215349249,215349763	Gene ID= ENSG00000138363.14 TPM= 9.34 Transcript Type= nonsense_mediated_decay
chr2	215312091	215349763	215312091	215349763	+	ENST00000435675.5@ATIC	ENST00000435675.5	protein_coding	215312091,215318157,215319665,215325241,215325987,215326822,215332382,215333350,215334919,215336035,215338779,215344779,215346759,215349094,215349536	215312624,215318233,215319731,215325329,215326138,215326978,215332507,215333457,215335004,215336124,215338907,215344871,215346941,215349249,215349763	Gene ID= ENSG00000138363.14 TPM= 14.01 Transcript Type= protein_coding
chr2	215312043	215348541	215312043	215348541	+	transcript8605.chr2.nic@ATIC	transcript8605.chr2.nic	protein_coding	215312043,215312498,215318157,215319665,215325241,215325987,215326822,215332382,215333350,215334919,215336035,215338779,215344779,215346759	215312161,215312624,215318233,215319731,215325329,215326138,215326978,215332507,215333457,215335004,215336124,215338907,215344871,215348541	Gene ID= ENSG00000138363.14 TPM= 4.67 Transcript Type= NA
chr2	215360454	215436172	215360454	215436172	-	ENST00000354785.8@FN1	ENST00000354785.8	protein_coding	215435655,215434696,215433324,215431833,215430715,215428180,215425094,215424146,215423350,215422091,215420673,215419242,215414837,215409934,215409563,215408298,215408108,215407127,215406238,215404389,215399257,215397680,215397137,215394528,215392931,215391632,215388212,215386689,215384860,215384020,215383328,215382212,215380811,215379130,215378175,215376498,215375629,215375214,215373322,215371909,215370294,215367863,215365505,215364879,215361969,215360454	215436172,215434824,215433461,215431964,215430852,215428338,215425285,215424325,215423526,215422243,215420801,215419385,215414958,215410114,215409739,215408426,215408197,215407321,215406510,215404655,215399351,215397848,215397223,215394719,215393203,215391814,215388301,215386958,215384976,215384184,215383483,215382325,215381080,215379317,215378262,215376674,215375718,215375393,215373411,215372375,215370432,215368027,215365630,215364985,215362079,215361626	Gene ID= ENSG00000115414.18 TPM= 21.64 Transcript Type= protein_coding
chr2	215360865	215436121	215360865	215436121	-	transcript8618.chr2.nic@FN1	transcript8618.chr2.nic	protein_coding	215435655,215434696,215433324,215431833,215430715,215428180,215425094,215424146,215423350,215422091,215420673,215419242,215414837,215409934,215409563,215408298,215408108,215407127,215406238,215404389,215399257,215397680,215397137,215394528,215391632,215388212,215386689,215384860,215384020,215383328,215382212,215380811,215379130,215378175,215376498,215375629,215375214,215373322,215371909,215370294,215367863,215365505,215364879,215361969,215360865	215436121,215434824,215433461,215431964,215430852,215428338,215425285,215424325,215423526,215422243,215420801,215419385,215414958,215410114,215409739,215408426,215408197,215407321,215406510,215404655,215399351,215397848,215397223,215394719,215391814,215388301,215386958,215384976,215384184,215383483,215382325,215381080,215379317,215378262,215376674,215375718,215375393,215373411,215372015,215370432,215368027,215365630,215364985,215362079,215361626	Gene ID= ENSG00000115414.18 TPM= 69.05 Transcript Type= NA
chr2	215360862	215436073	215360862	215436073	-	ENST00000443816.5@FN1	ENST00000443816.5	protein_coding	215435655,215434696,215433324,215431833,215430715,215428180,215425094,215424146,215423350,215422091,215420673,215419242,215414837,215409934,215409563,215408298,215408108,215407127,215406238,215404389,215399257,215397680,215397137,215394528,215391632,215388212,215386689,215384860,215384020,215383328,215382212,215379130,215378175,215376498,215375629,215375214,215373322,215372109,215371909,215370294,215367863,215365505,215364879,215361969,215360862	215436073,215434824,215433461,215431964,215430852,215428338,215425285,215424325,215423526,215422243,215420801,215419385,215414958,215410114,215409739,215408426,215408197,215407321,215406510,215404655,215399351,215397848,215397223,215394719,215391814,215388301,215386958,215384976,215384184,215383483,215382325,215379317,215378262,215376674,215375718,215375393,215373411,215372375,215372015,215370432,215368027,215365630,215364985,215362079,215361626	Gene ID= ENSG00000115414.18 TPM= 110.37 Transcript Type= protein_coding
chr2	215360865	215436067	215360865	215436067	-	ENST00000432072.6@FN1	ENST00000432072.6	protein_coding	215435655,215434696,215433324,215431833,215430715,215428180,215425094,215424146,215423350,215422091,215420673,215419242,215414837,215409934,215409563,215408298,215408108,215407127,215406238,215404389,215399257,215397680,215397137,215394528,215392931,215391632,215388212,215386689,215384860,215384020,215383328,215382212,215379130,215378175,215376498,215375629,215375214,215373322,215371909,215370294,215367863,215365505,215364879,215361969,215360865	215436067,215434824,215433461,215431964,215430852,215428338,215425285,215424325,215423526,215422243,215420801,215419385,215414958,215410114,215409739,215408426,215408197,215407321,215406510,215404655,215399351,215397848,215397223,215394719,215393203,215391814,215388301,215386958,215384976,215384184,215383483,215382325,215379317,215378262,215376674,215375718,215375393,215373411,215372015,215370432,215368027,215365630,215364985,215362079,215361626	Gene ID= ENSG00000115414.18 TPM= 39.38 Transcript Type= protein_coding
chr2	215360866	215436068	215360866	215436068	-	ENST00000356005.8@FN1	ENST00000356005.8	protein_coding	215435655,215434696,215433324,215431833,215430715,215428180,215425094,215424146,215423350,215422091,215420673,215419242,215414837,215409934,215409563,215408298,215408108,215407127,215406238,215404389,215399257,215397680,215397137,215394528,215391632,215388212,215386689,215384860,215384020,215383328,215382212,215379130,215378175,215376498,215375629,215375214,215373322,215371909,215370294,215367863,215365505,215364879,215361969,215360866	215436068,215434824,215433461,215431964,215430852,215428338,215425285,215424325,215423526,215422243,215420801,215419385,215414958,215410114,215409739,215408426,215408197,215407321,215406510,215404655,215399351,215397848,215397223,215394719,215391814,215388301,215386958,215384976,215384184,215383483,215382325,215379317,215378262,215376674,215375718,215375393,215373411,215372375,215370432,215368027,215365630,215364985,215362079,215361626	Gene ID= ENSG00000115414.18 TPM= 81.37 Transcript Type= protein_coding
chr2	215360862	215436068	215360862	215436068	-	ENST00000446046.5@FN1	ENST00000446046.5	protein_coding	215435655,215434696,215433324,215431833,215430715,215428180,215425094,215424146,215423350,215422091,215420673,215419242,215414837,215409934,215409563,215408298,215408108,215407127,215406238,215404389,215399257,215397680,215397137,215394528,215391632,215388212,215386689,215384860,215384020,215383328,215382212,215380811,215379130,215378175,215376498,215375629,215375214,215373322,215372109,215371909,215370294,215367863,215365505,215364879,215361969,215360862	215436068,215434824,215433461,215431964,215430852,215428338,215425285,215424325,215423526,215422243,215420801,215419385,215414958,215410114,215409739,215408426,215408197,215407321,215406510,215404655,215399351,215397848,215397223,215394719,215391814,215388301,215386958,215384976,215384184,215383483,215382325,215381080,215379317,215378262,215376674,215375718,215375393,215373411,215372300,215372015,215370432,215368027,215365630,215364985,215362079,215361626	Gene ID= ENSG00000115414.18 TPM= 41.19 Transcript Type= protein_coding
chr2	215942590	216013576	215942590	216013576	-	transcript8653.chr2.nnic@MREG	transcript8653.chr2.nnic	protein_coding	216013233,215996306,215947023,215945571,215944281,215942590	216013576,215996465,215947113,215945734,215944997,215943595	Gene ID= ENSG00000118242.15 TPM= 2.34 Transcript Type= NA
chr2	215944490	216013623	215944490	216013623	-	ENST00000263268.10@MREG	ENST00000263268.10	protein_coding	216013233,215996306,215947023,215945571,215944490	216013623,215996465,215947113,215945734,215944997	Gene ID= ENSG00000118242.15 TPM= 2.34 Transcript Type= protein_coding
chr2	216038409	216081816	216038409	216081816	-	ENST00000265322.7@PECR	ENST00000265322.7	protein_coding	216081618,216066385,216065312,216058895,216051449,216049263,216043904,216038409	216081816,216066518,216065477,216058976,216051545,216049373,216044015,216039360	Gene ID= ENSG00000115425.13 TPM= 16.35 Transcript Type= protein_coding
chr2	216081895	216102783	216081895	216102783	+	ENST00000295658.8@TMEM169	ENST00000295658.8	protein_coding	216081895,216095838,216099920	216081975,216096234,216102783	Gene ID= ENSG00000163449.10 TPM= 4.67 Transcript Type= protein_coding
chr2	216109297	216206291	216109297	216206291	+	ENST00000392132.6@XRCC5	ENST00000392132.6	protein_coding	216109297,216113016,216116659,216117746,216119043,216122062,216125917,216127536,216130875,216132325,216137088,216138089,216141186,216148083,216160068,216161979,216190225,216192639,216194919,216204322,216205188	216109457,216113129,216116842,216117794,216119165,216122253,216126031,216127674,216130987,216132387,216137225,216138179,216141319,216148276,216160161,216162048,216190334,216192735,216194986,216204396,216206291	Gene ID= ENSG00000079246.15 TPM= 127.27 Transcript Type= protein_coding
chr2	216208110	216213501	216208110	216213501	+	transcript8679.chr2.nnic@NA	transcript8679.chr2.nnic	NA	216208110	216213501	Gene ID= novel_gene_chr2_8680 TPM= 5.84 Transcript Type= NA
chr2	216217045	216220192	216217045	216220192	+	ENST00000562038.1@LINC01963	ENST00000562038.1	lincRNA	216217045	216220192	Gene ID= ENSG00000260804.3 TPM= 1.17 Transcript Type= lincRNA
chr2	216412453	216483053	216412453	216483053	+	transcript8684.chr2.nic@SMARCAL1	transcript8684.chr2.nic	protein_coding	216412453,216413856,216414647,216416257,216420299,216423633,216428596,216432718,216435338,216438420,216447018,216450846,216464597,216467944,216475269,216477109,216478203,216482738	216412603,216413892,216415515,216416307,216420532,216423683,216428782,216432868,216435496,216438485,216447158,216451064,216464667,216468046,216475451,216477209,216478299,216483053	Gene ID= ENSG00000138375.12 TPM= 3.5 Transcript Type= NA
chr2	216412414	216483053	216412414	216483053	+	ENST00000357276.8@SMARCAL1	ENST00000357276.8	protein_coding	216412414,216413856,216414647,216416257,216420299,216423633,216428596,216432718,216435338,216438420,216447018,216450846,216464597,216467944,216475269,216477109,216478203,216482738	216412648,216413892,216415515,216416307,216420532,216423683,216428782,216432868,216435496,216438485,216447158,216451064,216464667,216468046,216475451,216477209,216478299,216483053	Gene ID= ENSG00000138375.12 TPM= 9.34 Transcript Type= protein_coding
chr2	216412743	216483017	216412743	216483017	+	ENST00000358207.9@SMARCAL1	ENST00000358207.9	protein_coding	216412743,216413856,216414647,216416257,216420299,216423633,216428596,216432718,216435338,216438420,216447018,216450846,216464597,216467944,216475269,216477109,216478203,216482738	216412798,216413892,216415515,216416307,216420532,216423683,216428782,216432868,216435496,216438485,216447158,216451064,216464667,216468046,216475451,216477209,216478299,216483017	Gene ID= ENSG00000138375.12 TPM= 7.01 Transcript Type= protein_coding
chr2	216498189	216504086	216498189	216504086	+	ENST00000491306.5@RPL37A	ENST00000491306.5	protein_coding	216498189,216499270,216499949,216501341	216498877,216499398,216500031,216504086	Gene ID= ENSG00000197756.9 TPM= 241.69 Transcript Type= protein_coding
chr2	216498867	216501467	216498867	216501467	+	ENST00000359681.3@RPL37A	ENST00000359681.3	protein_coding	216498867,216499949,216501341	216499398,216500031,216501467	Gene ID= ENSG00000197756.9 TPM= 24.52 Transcript Type= retained_intron
chr2	216633395	216664436	216633395	216664436	+	ENST00000233809.8@IGFBP2	ENST00000233809.8	protein_coding	216633395,216660557,216661858,216663940	216633965,216660786,216661998,216664436	Gene ID= ENSG00000115457.9 TPM= 186.82 Transcript Type= protein_coding
chr2	216672105	216695525	216672105	216695525	-	ENST00000233813.4@IGFBP5	ENST00000233813.4	protein_coding	216694439,216678850,216678112,216672105	216695525,216679079,216678231,216676882	Gene ID= ENSG00000115461.4 TPM= 177.47 Transcript Type= protein_coding
chr2	217799789	217944128	217799789	217944128	-	ENST00000171887.8@TNS1	ENST00000171887.8	protein_coding	217943865,217920195,217907210,217906335,217900463,217897798,217895006,217893439,217892948,217890962,217886534,217886044,217885744,217885035,217882346,217880898,217847510,217836015,217835091,217831455,217830367,217829844,217821740,217817690,217814912,217813685,217813215,217812368,217810248,217809823,217808603,217808075,217799789	217944128,217920236,217907251,217906385,217900512,217897969,217895056,217893561,217893012,217891045,217886646,217886104,217885819,217885164,217882411,217881014,217849087,217836211,217835166,217831547,217830390,217829882,217821938,217818759,217814998,217813816,217813307,217812445,217810319,217809991,217808671,217808107,217804603	Gene ID= ENSG00000079308.16 TPM= 1369.97 Transcript Type= protein_coding
chr2	218070496	218090580	218070496	218090580	+	ENST00000344321.8@RUFY4	ENST00000344321.8	protein_coding	218070496,218070753,218072374,218072779,218073243,218073816,218075093,218076427,218083110,218089252,218089952	218070651,218070859,218072499,218072885,218073386,218073885,218075740,218076533,218083256,218089362,218090580	Gene ID= ENSG00000188282.12 TPM= 1.17 Transcript Type= protein_coding
chr2	218126004	218137253	218126004	218137253	+	ENST00000318507.6@CXCR2	ENST00000318507.6	protein_coding	218126004,218129314,218134777	218126353,218129365,218137253	Gene ID= ENSG00000180871.7 TPM= 5.84 Transcript Type= protein_coding
chr2	218162845	218166995	218162845	218166995	-	ENST00000295683.2@CXCR1	ENST00000295683.2	protein_coding	218166908,218162845	218166995,218165244	Gene ID= ENSG00000163464.7 TPM= 1.17 Transcript Type= protein_coding
chr2	218217094	218254348	218217094	218254348	+	ENST00000315717.9@ARPC2	ENST00000315717.9	protein_coding	218217094,218217463,218225920,218228738,218234352,218238664,218239391,218245420,218249364,218249821,218253891	218217254,218217544,218225954,218228850,218234397,218238850,218239484,218245546,218249464,218249921,218254348	Gene ID= ENSG00000163466.15 TPM= 819.07 Transcript Type= protein_coding
chr2	218217210	218254356	218217210	218254356	+	ENST00000295685.14@ARPC2	ENST00000295685.14	protein_coding	218217210,218225920,218228738,218234352,218238664,218239391,218245420,218249364,218249821,218253891	218217544,218225954,218228850,218234397,218238850,218239484,218245546,218249464,218249921,218254356	Gene ID= ENSG00000163466.15 TPM= 9.34 Transcript Type= protein_coding
chr2	218261015	218263859	218261015	218263859	+	ENST00000519574.1@GPBAR1	ENST00000519574.1	protein_coding	218261015,218262680	218261216,218263859	Gene ID= ENSG00000179921.14 TPM= 2.34 Transcript Type= protein_coding
chr2	218264123	218270257	218264123	218270257	-	ENST00000248450.8@AAMP	ENST00000248450.8	protein_coding	218269966,218269382,218267494,218266847,218266443,218266064,218265831,218265579,218265371,218265020,218264123	218270257,218269534,218267613,218266986,218266587,218266147,218265946,218265682,218265461,218265174,218264608	Gene ID= ENSG00000127837.9 TPM= 179.52 Transcript Type= protein_coding
chr2	218264129	218270182	218264129	218270182	-	transcript8784.chr2.nic@AAMP	transcript8784.chr2.nic	protein_coding	218269966,218269382,218267494,218266847,218266443,218266064,218265371,218265020,218264129	218270182,218269534,218267613,218266986,218266587,218266147,218265946,218265174,218264608	Gene ID= ENSG00000127837.9 TPM= 9.05 Transcript Type= NA
chr2	218264129	218270178	218264129	218270178	-	ENST00000444053.5@AAMP	ENST00000444053.5	protein_coding	218269966,218269382,218267494,218266847,218266443,218266064,218265831,218265579,218265371,218265020,218264129	218270178,218269537,218267613,218266986,218266587,218266147,218265946,218265682,218265461,218265174,218264608	Gene ID= ENSG00000127837.9 TPM= 23.06 Transcript Type= protein_coding
chr2	218264162	218269740	218264162	218269740	-	ENST00000420660.5@AAMP	ENST00000420660.5	protein_coding	218269382,218267494,218266847,218266443,218266064,218265831,218265579,218265371,218265020,218264162	218269740,218267613,218266986,218266587,218266147,218265946,218265682,218265461,218265174,218264608	Gene ID= ENSG00000127837.9 TPM= 2.34 Transcript Type= protein_coding
chr2	218264130	218270088	218264130	218270088	-	ENST00000475678.5@AAMP	ENST00000475678.5	protein_coding	218269966,218269382,218267494,218266847,218265579,218265371,218265020,218264130	218270088,218269534,218267613,218266986,218266587,218265461,218265174,218264608	Gene ID= ENSG00000127837.9 TPM= 3.21 Transcript Type= retained_intron
chr2	218270392	218272947	218270392	218272947	+	ENST00000248451.7@PNKD	ENST00000248451.7	protein_coding	218270392,218271381,218272570	218270602,218271549,218272947	Gene ID= ENSG00000127838.13 TPM= 60.71 Transcript Type= protein_coding
chr2	218270520	218272911	218270520	218272911	+	ENST00000469689.1@PNKD	ENST00000469689.1	protein_coding	218270520,218272570	218271549,218272911	Gene ID= ENSG00000127838.13 TPM= 5.84 Transcript Type= retained_intron
chr2	218274201	218292538	218274201	218292538	-	transcript8797.chr2.nic@TMBIM1	transcript8797.chr2.nic	protein_coding	218292466,218285763,218281940,218280026,218279289,218279038,218278515,218277935,218277633,218277366,218277004,218276026,218274201	218292538,218285938,218282181,218280126,218279353,218279091,218278565,218277974,218277670,218277453,218277099,218276079,218275621	Gene ID= ENSG00000135926.14 TPM= 65.13 Transcript Type= NA
chr2	218274192	218292577	218274192	218292577	-	ENST00000258412.7@TMBIM1	ENST00000258412.7	protein_coding	218292466,218281940,218280026,218279289,218279038,218278515,218277935,218277633,218277366,218277004,218276026,218274192	218292577,218282181,218280126,218279353,218279091,218278565,218277974,218277670,218277453,218277099,218276079,218275621	Gene ID= ENSG00000135926.14 TPM= 466.49 Transcript Type= protein_coding
chr2	218288786	218289644	218288786	218289644	+	transcript8822.chr2.nnic@NA	transcript8822.chr2.nnic	NA	218288786	218289644	Gene ID= novel_gene_chr2_8823 TPM= 7.01 Transcript Type= NA
chr2	218323280	218346791	218323280	218346791	+	transcript8866.chr2.nic@PNKD	transcript8866.chr2.nic	protein_coding	218323280,218339783,218340029,218340728,218341981,218343500,218344455,218344808	218323431,218339898,218340141,218341626,218342144,218343586,218344570,218346791	Gene ID= ENSG00000127838.13 TPM= 15.18 Transcript Type= NA
chr2	218323173	218346791	218323173	218346791	+	ENST00000258362.7@PNKD	ENST00000258362.7	protein_coding	218323173,218339783,218340029,218340728,218341534,218341981,218343500,218344455,218344808	218323431,218339898,218340141,218340786,218341626,218342144,218343586,218344570,218346791	Gene ID= ENSG00000127838.13 TPM= 58.38 Transcript Type= protein_coding
chr2	218356856	218368094	218356856	218368094	+	ENST00000289388.3@CATIP	ENST00000289388.3	protein_coding	218356856,218357095,218357534,218358037,218360573,218362735,218364628,218367024,218367430,218367722	218356909,218357187,218357734,218358092,218360659,218362902,218364752,218367100,218367518,218368094	Gene ID= ENSG00000158428.3 TPM= 1.17 Transcript Type= protein_coding
chr2	218366664	218368095	218366664	218368095	-	transcript8892.chr2.nnic@NA	transcript8892.chr2.nnic	NA	218366664	218368095	Gene ID= novel_gene_chr2_8893 TPM= 3.5 Transcript Type= NA
chr2	218382253	218395776	218382253	218395776	+	transcript8835.chr2.nic@SLC11A1	transcript8835.chr2.nic	protein_coding	218382253,218382960,218384243,218385147,218386635,218387160,218387565,218387800,218389870,218391198,218391376,218392981,218394120,218394632,218394925,218395639	218382375,218383102,218384365,218385266,218386741,218387230,218387632,218387955,218390028,218391287,218391495,218393130,218394193,218394785,218395066,218395776	Gene ID= ENSG00000018280.16 TPM= 12.84 Transcript Type= NA
chr2	218382029	218396894	218382029	218396894	+	ENST00000233202.10@SLC11A1	ENST00000233202.10	protein_coding	218382029,218382960,218384243,218385147,218386635,218387160,218387565,218387800,218389870,218391198,218391376,218392981,218394120,218394632,218394925	218382375,218383102,218384365,218385266,218386741,218387230,218387632,218387955,218390028,218391287,218391495,218393130,218394193,218394785,218396894	Gene ID= ENSG00000018280.16 TPM= 126.49 Transcript Type= protein_coding
chr2	218382026	218388992	218382026	218388992	+	transcript8864.chr2.nnic@SLC11A1	transcript8864.chr2.nnic	protein_coding	218382026,218382960,218384243,218385147,218386635,218387160,218387565,218387800,218388649	218382375,218383102,218384365,218385266,218386741,218387230,218387632,218387955,218388992	Gene ID= ENSG00000018280.16 TPM= 17.51 Transcript Type= NA
chr2	218382248	218395323	218382248	218395323	+	ENST00000354352.9@SLC11A1	ENST00000354352.9	protein_coding	218382248,218382960,218384243,218385147,218385412,218386635,218387160,218387565,218387800,218389870,218391198,218391376,218392981,218394120,218394632,218394925	218382375,218383102,218384365,218385266,218385485,218386741,218387230,218387632,218387955,218390028,218391287,218391495,218393130,218394193,218394785,218395323	Gene ID= ENSG00000018280.16 TPM= 8.56 Transcript Type= nonsense_mediated_decay
chr2	218399755	218405941	218399755	218405941	+	ENST00000273062.6@CTDSP1	ENST00000273062.6	protein_coding	218399755,218401564,218402111,218402349,218403035,218403232,218404297	218400157,218401712,218402215,218402405,218403127,218403417,218405941	Gene ID= ENSG00000144579.7 TPM= 70.64 Transcript Type= protein_coding
chr2	218400579	218405941	218400579	218405941	+	transcript8878.chr2.nic@CTDSP1	transcript8878.chr2.nic	protein_coding	218400579,218401564,218402114,218402349,218403035,218403232,218404297	218400897,218401712,218402215,218402405,218403127,218403417,218405941	Gene ID= ENSG00000144579.7 TPM= 56.63 Transcript Type= NA
chr2	218398742	218399663	218398742	218399663	-	transcript8894.chr2.nnic@NA	transcript8894.chr2.nnic	NA	218398742	218399663	Gene ID= novel_gene_chr2_8895 TPM= 3.5 Transcript Type= NA
chr2	218450251	218568361	218450251	218568361	-	ENST00000258399.7@USP37	ENST00000258399.7	protein_coding	218568178,218562673,218560820,218558498,218553553,218549809,218546919,218546221,218534609,218529956,218509979,218498026,218497734,218495760,218488304,218485664,218482070,218479650,218476840,218474630,218466010,218463306,218459790,218457092,218455580,218450251	218568361,218562813,218560883,218558677,218553724,218549909,218547091,218546298,218534706,218530040,218510140,218498157,218497857,218495950,218488421,218485743,218482234,218479715,218476981,218474885,218466176,218463366,218459905,218457161,218455718,218455017	Gene ID= ENSG00000135913.10 TPM= 7.01 Transcript Type= protein_coding
chr2	218568580	218597080	218568580	218597080	+	ENST00000273064.10@CNOT9	ENST00000273064.10	protein_coding	218568580,218580561,218582971,218584612,218587586,218592304,218592616,218594108	218568978,218580740,218583086,218584721,218587695,218592402,218592707,218597080	Gene ID= ENSG00000144580.13 TPM= 9.34 Transcript Type= protein_coding
chr2	218568875	218593842	218568875	218593842	+	ENST00000295701.9@CNOT9	ENST00000295701.9	protein_coding	218568875,218580561,218582971,218584612,218587586,218592304,218592616,218593528	218568978,218580740,218583086,218584721,218587695,218592402,218592707,218593842	Gene ID= ENSG00000144580.13 TPM= 2.34 Transcript Type= protein_coding
chr2	218644649	218647433	218644649	218647433	+	transcript8920.chr2.nnic@NA	transcript8920.chr2.nnic	NA	218644649	218647433	Gene ID= novel_gene_chr2_8921 TPM= 3.5 Transcript Type= NA
chr2	218659719	218663443	218659719	218663443	+	transcript8906.chr2.nic@BCS1L	transcript8906.chr2.nic	protein_coding	218659719,218660307,218660939,218661406,218661759,218662197,218662510,218662883,218663134	218659743,218660421,218661307,218661545,218661953,218662260,218662679,218663000,218663443	Gene ID= ENSG00000074582.12 TPM= 3.6 Transcript Type= NA
chr2	218659656	218663443	218659656	218663443	+	ENST00000359273.7@BCS1L	ENST00000359273.7	protein_coding	218659656,218660939,218661406,218661759,218662197,218662510,218662883,218663134	218659743,218661307,218661545,218661953,218662260,218662679,218663000,218663443	Gene ID= ENSG00000074582.12 TPM= 12.94 Transcript Type= protein_coding
chr2	218658820	218663443	218658820	218663443	+	transcript8913.chr2.nic@BCS1L	transcript8913.chr2.nic	protein_coding	218658820,218661406,218661759,218662197,218662510,218662883,218663134	218661307,218661520,218661953,218662260,218662679,218663000,218663443	Gene ID= ENSG00000074582.12 TPM= 5.84 Transcript Type= NA
chr2	218659772	218663442	218659772	218663442	+	ENST00000431802.5@BCS1L	ENST00000431802.5	protein_coding	218659772,218660939,218661406,218661759,218662197,218662510,218662883,218663134	218660421,218661307,218661545,218661953,218662260,218662679,218663000,218663442	Gene ID= ENSG00000074582.12 TPM= 3.01 Transcript Type= protein_coding
chr2	218663864	218672411	218663864	218672411	-	ENST00000295704.6@RNF25	ENST00000295704.6	protein_coding	218671930,218668605,218668239,218668079,218667912,218666159,218665916,218665155,218664739,218663864	218672411,218668679,218668341,218668146,218667981,218666230,218666059,218665247,218664873,218664535	Gene ID= ENSG00000163481.7 TPM= 43.2 Transcript Type= protein_coding
chr2	218663892	218671977	218663892	218671977	-	ENST00000473034.5@RNF25	ENST00000473034.5	protein_coding	218671930,218668079,218667912,218666159,218665916,218665155,218664739,218663892	218671977,218668679,218667981,218666230,218666059,218665247,218664873,218664535	Gene ID= ENSG00000163481.7 TPM= 2.34 Transcript Type= retained_intron
chr2	218781756	218815293	218781756	218815293	+	ENST00000258415.8@CYP27A1	ENST00000258415.8	protein_coding	218781756,218809577,218812222,218812552,218812924,218814021,218814380,218814545,218814911	218782437,218809767,218812421,218812749,218813096,218814187,218814458,218814757,218815293	Gene ID= ENSG00000135929.8 TPM= 540.89 Transcript Type= protein_coding
chr2	218783199	218789715	218783199	218789715	-	transcript8964.chr2.nnic@NA	transcript8964.chr2.nnic	NA	218783199	218789715	Gene ID= novel_gene_chr2_8965 TPM= 3.5 Transcript Type= NA
chr2	218801981	218803715	218801981	218803715	-	transcript8962.chr2.nnic@NA	transcript8962.chr2.nnic	NA	218801981	218803715	Gene ID= novel_gene_chr2_8963 TPM= 15.18 Transcript Type= NA
chr2	218819304	218822522	218819304	218822522	+	transcript8966.chr2.nnic@NA	transcript8966.chr2.nnic	NA	218819304	218822522	Gene ID= novel_gene_chr2_8967 TPM= 2.34 Transcript Type= NA
chr2	218859821	218874233	218859821	218874233	+	ENST00000233948.3@WNT6	ENST00000233948.3	protein_coding	218859821,218871027,218871485,218873384	218860117,218871247,218871819,218874233	Gene ID= ENSG00000115596.3 TPM= 2.34 Transcript Type= protein_coding
chr2	218880363	218893931	218880363	218893931	+	ENST00000258411.7@WNT10A	ENST00000258411.7	protein_coding	218880363,218882161,218889984,218892774	218881108,218882423,218890363,218893931	Gene ID= ENSG00000135925.8 TPM= 5.84 Transcript Type= protein_coding
chr2	219075321	219160853	219075321	219160853	-	ENST00000356853.9@NHEJ1	ENST00000356853.9	protein_coding	219160720,219158186,219157472,219147657,219146680,219078089,219077246,219075321	219160853,219158362,219157684,219147795,219146738,219078206,219077364,219076455	Gene ID= ENSG00000187736.12 TPM= 15.18 Transcript Type= protein_coding
chr2	219161465	219164682	219161465	219164682	-	transcript8975.chr2.nic@AC068946.1	transcript8975.chr2.nic	protein_coding	219162299,219161465	219164682,219162204	Gene ID= ENSG00000280537.2 TPM= 2.34 Transcript Type= NA
chr2	219171897	219178168	219171897	219178168	-	transcript8992.chr2.nnic@CNPPD1	transcript8992.chr2.nnic	protein_coding	219178121,219176760,219176223,219175591,219174988,219174778,219174146,219173350,219171897	219178168,219176847,219176331,219175672,219175108,219174906,219174207,219173467,219173128	Gene ID= ENSG00000115649.15 TPM= 10.51 Transcript Type= NA
chr2	219171897	219176966	219171897	219176966	-	ENST00000360507.9@CNPPD1	ENST00000360507.9	protein_coding	219176760,219176223,219175591,219174988,219174778,219174146,219173350,219171897	219176966,219176331,219175672,219175108,219174906,219174207,219173467,219173128	Gene ID= ENSG00000115649.15 TPM= 241.69 Transcript Type= protein_coding
chr2	219178220	219183492	219178220	219183492	+	transcript8980.chr2.nic@RETREG2	transcript8980.chr2.nic	protein_coding	219178220,219178922,219179733,219180110,219180670,219181062,219181369,219181640,219182013,219182414	219178633,219179028,219179763,219180245,219180754,219181205,219181463,219181775,219182308,219183492	Gene ID= ENSG00000144567.10 TPM= 4.67 Transcript Type= NA
chr2	219178217	219185479	219178217	219185479	+	ENST00000430297.6@RETREG2	ENST00000430297.6	protein_coding	219178217,219178922,219179733,219180110,219180670,219181062,219181369,219181640,219182013	219178633,219179028,219179763,219180245,219180754,219181205,219181463,219181775,219185479	Gene ID= ENSG00000144567.10 TPM= 29.19 Transcript Type= protein_coding
chr2	219178227	219183492	219178227	219183492	+	ENST00000273048.2@RETREG2	ENST00000273048.2	protein_coding	219178227,219178922,219179733,219180198,219180670,219181062,219181369,219181640,219182013	219178633,219179028,219179763,219180245,219180754,219181205,219181463,219181775,219183492	Gene ID= ENSG00000144567.10 TPM= 21.02 Transcript Type= nonsense_mediated_decay
chr2	219206774	219209647	219206774	219209647	+	transcript9006.chr2.nic@ZFAND2B	transcript9006.chr2.nic	protein_coding	219206774,219206970,219207327,219207648,219207887,219208256,219208426,219208572	219206845,219207042,219207421,219207779,219208038,219208348,219208486,219209647	Gene ID= ENSG00000158552.12 TPM= 14.01 Transcript Type= NA
chr2	219206793	219209651	219206793	219209651	+	ENST00000289528.9@ZFAND2B	ENST00000289528.9	protein_coding	219206793,219207327,219207648,219207887,219208256,219208426,219208572,219208977,219209262	219207042,219207421,219207779,219208038,219208348,219208486,219208639,219209049,219209651	Gene ID= ENSG00000158552.12 TPM= 30.36 Transcript Type= protein_coding
chr2	219209772	219218859	219209772	219218859	-	transcript9025.chr2.nic@ABCB6	transcript9025.chr2.nic	protein_coding	219218125,219217670,219216364,219215997,219214961,219214389,219214121,219213826,219213590,219213439,219213241,219213008,219212387,219210934,219210381,219210230,219209772	219218859,219217807,219216832,219216180,219215082,219214498,219214186,219213951,219213666,219213502,219213326,219213065,219212491,219211108,219210823,219210298,219210046	Gene ID= ENSG00000115657.12 TPM= 2.34 Transcript Type= NA
chr2	219209772	219218860	219209772	219218860	-	transcript9027.chr2.nic@ABCB6	transcript9027.chr2.nic	protein_coding	219218125,219217670,219214389,219214121,219213826,219213590,219213439,219213241,219212387,219210934,219210381,219210230,219209772	219218860,219217807,219216832,219214186,219213951,219213666,219213502,219213326,219213065,219211108,219210823,219210298,219210046	Gene ID= ENSG00000115657.12 TPM= 3.5 Transcript Type= NA
chr2	219209768	219218990	219209768	219218990	-	ENST00000265316.7@ABCB6	ENST00000265316.7	protein_coding	219218125,219217670,219216652,219216364,219215997,219214961,219214389,219214121,219213826,219213590,219213439,219213241,219213008,219212387,219210934,219210711,219210381,219210230,219209768	219218990,219217807,219216832,219216465,219216180,219215082,219214498,219214186,219213951,219213666,219213502,219213326,219213065,219212491,219211108,219210823,219210475,219210298,219210046	Gene ID= ENSG00000115657.12 TPM= 40.87 Transcript Type= protein_coding
chr2	219219380	219229632	219219380	219229632	-	transcript9029.chr2.nic@ATG9A	transcript9029.chr2.nic	protein_coding	219229535,219229010,219228434,219227922,219227770,219226869,219225411,219225071,219224106,219223869,219223585,219222645,219222272,219222050,219221080,219220747,219219380	219229632,219229174,219228485,219228053,219227813,219226933,219225572,219225212,219224854,219224022,219223764,219222893,219222450,219222167,219221302,219220892,219220452	Gene ID= ENSG00000198925.10 TPM= 26.18 Transcript Type= NA
chr2	219219382	219229368	219219382	219229368	-	ENST00000409618.5@ATG9A	ENST00000409618.5	protein_coding	219229010,219228434,219227922,219227770,219226869,219225411,219225071,219224106,219223869,219223585,219222645,219222272,219222050,219221080,219220747,219219382	219229368,219228485,219228053,219227813,219226933,219225572,219225212,219224854,219224022,219223764,219222893,219222450,219222167,219221302,219220892,219220452	Gene ID= ENSG00000198925.10 TPM= 14.89 Transcript Type= protein_coding
chr2	219219380	219229717	219219380	219229717	-	ENST00000396761.6@ATG9A	ENST00000396761.6	protein_coding	219229535,219227922,219227770,219226869,219225411,219225071,219224106,219223869,219223585,219222645,219222272,219222050,219221080,219220747,219219380	219229717,219228053,219227813,219226933,219225572,219225212,219224854,219224022,219223764,219222893,219222450,219222167,219221302,219220892,219220452	Gene ID= ENSG00000198925.10 TPM= 31.43 Transcript Type= protein_coding
chr2	219219380	219229626	219219380	219229626	-	ENST00000409033.7@ATG9A	ENST00000409033.7	protein_coding	219229535,219228434,219227922,219227770,219226869,219225411,219225071,219224106,219223928,219223585,219222645,219222272,219222050,219221080,219220747,219219380	219229626,219228485,219228053,219227813,219226933,219225572,219225212,219224854,219224022,219223764,219222893,219222450,219222167,219221302,219220892,219220452	Gene ID= ENSG00000198925.10 TPM= 10.41 Transcript Type= nonsense_mediated_decay
chr2	219229757	219236669	219229757	219236669	+	ENST00000323348.9@ANKZF1	ENST00000323348.9	protein_coding	219229757,219230228,219231928,219232260,219232490,219233079,219233286,219233715,219234133,219234826,219235474,219235708,219236010,219236322	219229900,219230405,219232040,219232362,219232683,219233191,219233433,219233943,219234288,219235312,219235585,219235875,219236095,219236669	Gene ID= ENSG00000163516.13 TPM= 33.28 Transcript Type= protein_coding
chr2	219229772	219236651	219229772	219236651	+	transcript9047.chr2.nic@ANKZF1	transcript9047.chr2.nic	protein_coding	219229772,219230228,219231928,219232260,219232490,219233079,219233286,219233715,219234133,219235708,219236010,219236322	219229900,219230405,219232040,219232362,219232683,219233191,219233433,219233943,219235585,219235875,219236095,219236651	Gene ID= ENSG00000163516.13 TPM= 5.84 Transcript Type= NA
chr2	219229772	219236651	219229772	219236651	+	transcript9050.chr2.nic@ANKZF1	transcript9050.chr2.nic	protein_coding	219229772,219230228,219231928,219232260,219232490,219233079,219233286,219233715,219234133,219236010,219236322	219229900,219230405,219232040,219232362,219232683,219233191,219233433,219233943,219235875,219236095,219236651	Gene ID= ENSG00000163516.13 TPM= 7.01 Transcript Type= NA
chr2	219229835	219236651	219229835	219236651	+	transcript9054.chr2.nic@ANKZF1	transcript9054.chr2.nic	protein_coding	219229835,219230228,219231928,219232260,219232490,219233079,219234133,219236010,219236322	219229900,219230405,219232040,219232362,219232683,219233943,219235875,219236095,219236651	Gene ID= ENSG00000163516.13 TPM= 3.5 Transcript Type= NA
chr2	219229838	219236651	219229838	219236651	+	ENST00000463792.5@ANKZF1	ENST00000463792.5	protein_coding	219229838,219230228,219231928,219232260,219232490,219233079,219233286,219233715,219234133,219236010,219236322	219229900,219230350,219232040,219232362,219232683,219233191,219233433,219233943,219235875,219236095,219236651	Gene ID= ENSG00000163516.13 TPM= 8.17 Transcript Type= retained_intron
chr2	219229827	219236618	219229827	219236618	+	ENST00000477479.5@ANKZF1	ENST00000477479.5	protein_coding	219229827,219230228,219231928,219232260,219232490,219233079,219233286,219233715,219234133,219235474,219235708,219236010,219236322	219229900,219230350,219232040,219232362,219232683,219233191,219233433,219233943,219235312,219235585,219235875,219236095,219236618	Gene ID= ENSG00000163516.13 TPM= 2.92 Transcript Type= retained_intron
chr2	219236606	219245472	219236606	219245472	-	ENST00000295759.11@GLB1L	ENST00000295759.11	protein_coding	219245229,219243502,219243148,219242768,219242514,219240191,219239920,219239775,219239561,219239411,219239092,219238705,219238495,219238250,219237826,219237512,219236606	219245472,219243643,219243314,219242918,219242574,219240285,219240094,219239833,219239682,219239451,219239210,219238779,219238584,219238363,219237957,219237727,219237347	Gene ID= ENSG00000163521.15 TPM= 2.34 Transcript Type= protein_coding
chr2	219250284	219269838	219250284	219269838	-	transcript9062.chr2.nnic@TUBA4A	transcript9062.chr2.nnic	protein_coding	219269679,219252008,219251565,219250284	219269838,219252200,219251713,219251323	Gene ID= ENSG00000127824.13 TPM= 5.84 Transcript Type= NA
chr2	219249711	219254032	219249711	219254032	-	ENST00000248437.8@TUBA4A	ENST00000248437.8	protein_coding	219253856,219252008,219251565,219249711	219254032,219252230,219251713,219251323	Gene ID= ENSG00000127824.13 TPM= 30.36 Transcript Type= protein_coding
chr2	219279267	219286900	219279267	219286900	+	ENST00000336576.9@DNAJB2	ENST00000336576.9	protein_coding	219279267,219279798,219280578,219281718,219281939,219282837,219283133,219283419,219284632	219279518,219279898,219280687,219281771,219282061,219282929,219283235,219283489,219286900	Gene ID= ENSG00000135924.15 TPM= 7.59 Transcript Type= protein_coding
chr2	219279344	219286898	219279344	219286898	+	ENST00000392086.8@DNAJB2	ENST00000392086.8	protein_coding	219279344,219279798,219280578,219281718,219281939,219282837,219283133,219283419,219284632,219285987	219279518,219279898,219280687,219281771,219282061,219282929,219283235,219283489,219284835,219286898	Gene ID= ENSG00000135924.15 TPM= 12.26 Transcript Type= protein_coding
chr2	219372157	219374243	219372157	219374243	-	transcript9104.chr2.nnic@NA	transcript9104.chr2.nnic	NA	219372157	219374243	Gene ID= novel_gene_chr2_9105 TPM= 2.34 Transcript Type= NA
chr2	219373546	219388015	219373546	219388015	-	ENST00000273075.8@DNPEP	ENST00000273075.8	protein_coding	219387759,219387070,219386892,219386665,219386286,219385968,219385631,219385424,219384366,219383131,219381979,219381545,219381335,219374855,219373546	219388015,219387163,219386980,219386778,219386411,219386098,219385706,219385531,219384443,219383214,219382139,219381584,219381436,219375022,219374342	Gene ID= ENSG00000123992.18 TPM= 12.84 Transcript Type= protein_coding
chr2	219374194	219387371	219374194	219387371	-	transcript9081.chr2.nic@DNPEP	transcript9081.chr2.nic	protein_coding	219387278,219387070,219386892,219386665,219386286,219385968,219385631,219385424,219384366,219383131,219381979,219381545,219381335,219374855,219374194	219387371,219387163,219386980,219386778,219386411,219386098,219385706,219385531,219384443,219383214,219382139,219381584,219381436,219375022,219374342	Gene ID= ENSG00000123992.18 TPM= 8.17 Transcript Type= NA
chr2	219374196	219387929	219374196	219387929	-	ENST00000373963.5@DNPEP	ENST00000373963.5	protein_coding	219387759,219387070,219386892,219386665,219386286,219385968,219385631,219385424,219384366,219383131,219381979,219381545,219381335,219374855,219374196	219387929,219387163,219386948,219386778,219386411,219386098,219385706,219385531,219384443,219383214,219382139,219381584,219381436,219375022,219374342	Gene ID= ENSG00000123992.18 TPM= 16.35 Transcript Type= nonsense_mediated_decay
chr2	219418377	219426739	219418377	219426739	+	ENST00000373960.3@DES	ENST00000373960.3	protein_coding	219418377,219420095,219420251,219420495,219420828,219421340,219423777,219425663,219425949	219419040,219420155,219420346,219420656,219420953,219421560,219423820,219425745,219426739	Gene ID= ENSG00000175084.11 TPM= 198.49 Transcript Type= protein_coding
chr2	219441994	219466860	219441994	219466860	+	transcript9108.chr2.nic@SPEG	transcript9108.chr2.nic	protein_coding	219441994,219443108,219444030,219444653,219444825,219447974,219451136,219451625,219461882,219462298,219464433,219466057	219442083,219443150,219444059,219444742,219445161,219449271,219451279,219451807,219462057,219462386,219464608,219466860	Gene ID= ENSG00000072195.14 TPM= 5.84 Transcript Type= NA
chr2	219498867	219506987	219498867	219506987	+	ENST00000313597.9@GMPPA	ENST00000313597.9	protein_coding	219498867,219499956,219500121,219501476,219501851,219502382,219504083,219505228,219505458,219505715,219505980,219506254,219506698	219498938,219500015,219500218,219501579,219502037,219502441,219504213,219505362,219505555,219505761,219506072,219506422,219506987	Gene ID= ENSG00000144591.18 TPM= 21.83 Transcript Type= protein_coding
chr2	219498901	219506989	219498901	219506989	+	ENST00000358215.8@GMPPA	ENST00000358215.8	protein_coding	219498901,219499961,219500121,219501476,219501851,219502382,219504083,219505228,219505458,219505715,219505980,219506254,219506698	219499254,219500015,219500218,219501579,219502037,219502441,219504213,219505362,219505555,219505761,219506072,219506422,219506989	Gene ID= ENSG00000144591.18 TPM= 1.69 Transcript Type= protein_coding
chr2	219498863	219506987	219498863	219506987	+	transcript9116.chr2.nic@GMPPA	transcript9116.chr2.nic	protein_coding	219498863,219499956,219500121,219501476,219502382,219504083,219505228,219505458,219505715,219505980,219506254,219506698	219498938,219500015,219500218,219502037,219502441,219504213,219505362,219505555,219505761,219506072,219506422,219506987	Gene ID= ENSG00000144591.18 TPM= 3.15 Transcript Type= NA
chr2	219498863	219506987	219498863	219506987	+	transcript9119.chr2.nic@GMPPA	transcript9119.chr2.nic	protein_coding	219498863,219499956,219500121,219501476,219502382,219504083,219505228,219505458,219505980,219506254,219506698	219498938,219500015,219500218,219502037,219502441,219504213,219505362,219505761,219506072,219506422,219506987	Gene ID= ENSG00000144591.18 TPM= 2.86 Transcript Type= NA
chr2	219498906	219506988	219498906	219506988	+	ENST00000373908.5@GMPPA	ENST00000373908.5	protein_coding	219498906,219499961,219500121,219501476,219501851,219502382,219504083,219505228,219505458,219505715,219505980,219506254,219506698	219498938,219500015,219500218,219501579,219502037,219502441,219504213,219505362,219505555,219505761,219506072,219506422,219506988	Gene ID= ENSG00000144591.18 TPM= 3.15 Transcript Type= protein_coding
chr2	219538951	219543738	219538951	219543738	-	transcript9132.chr2.nnic@CHPF	transcript9132.chr2.nnic	protein_coding	219543225,219541616,219540975,219538951	219543738,219542189,219541125,219540588	Gene ID= ENSG00000123989.13 TPM= 21.6 Transcript Type= NA
chr2	219538947	219543787	219538947	219543787	-	ENST00000243776.10@CHPF	ENST00000243776.10	protein_coding	219543225,219541616,219540946,219538947	219543787,219542189,219541125,219540642	Gene ID= ENSG00000123989.13 TPM= 189.73 Transcript Type= protein_coding
chr2	219541460	219543573	219541460	219543573	-	ENST00000373891.2@CHPF	ENST00000373891.2	protein_coding	219543225,219541460	219543573,219542189	Gene ID= ENSG00000123989.13 TPM= 2.34 Transcript Type= protein_coding
chr2	219544025	219550595	219544025	219550595	+	transcript9126.chr2.nic@TMEM198	transcript9126.chr2.nic	protein_coding	219544025,219544724,219547506,219549152,219549717	219544377,219544893,219548081,219549354,219550595	Gene ID= ENSG00000188760.10 TPM= 3.5 Transcript Type= NA
chr2	219555763	219571563	219555763	219571563	-	transcript9144.chr2.nic@OBSL1	transcript9144.chr2.nic	protein_coding	219570221,219568055,219567718,219567273,219566830,219565242,219563355,219562402,219559225,219558184,219557823,219556454,219555763	219571563,219568324,219567969,219567575,219567126,219565514,219563627,219562674,219559497,219558459,219558110,219556723,219556292	Gene ID= ENSG00000124006.14 TPM= 9.19 Transcript Type= NA
chr2	219561722	219571563	219561722	219571563	-	transcript9156.chr2.nic@OBSL1	transcript9156.chr2.nic	protein_coding	219570221,219568055,219567273,219566830,219565242,219563355,219562402,219561722	219571563,219568324,219567969,219567126,219565514,219563627,219562674,219562008	Gene ID= ENSG00000124006.14 TPM= 13.28 Transcript Type= NA
chr2	219561722	219571289	219561722	219571289	-	ENST00000373873.8@OBSL1	ENST00000373873.8	protein_coding	219570221,219568055,219567718,219567273,219566830,219565242,219563355,219562402,219561722	219571289,219568324,219567969,219567575,219567126,219565514,219563627,219562674,219562008	Gene ID= ENSG00000124006.14 TPM= 75.51 Transcript Type= protein_coding
chr2	219561747	219571464	219561747	219571464	-	ENST00000289656.3@OBSL1	ENST00000289656.3	protein_coding	219571394,219568055,219567718,219567273,219566830,219565242,219563355,219562402,219561747	219571464,219568324,219567969,219567575,219567126,219565514,219563627,219562674,219562008	Gene ID= ENSG00000124006.14 TPM= 1.17 Transcript Type= protein_coding
chr2	219597860	219616451	219597860	219616451	+	ENST00000456909.5@STK11IP	ENST00000456909.5	protein_coding	219597860,219598094,219601235,219601641,219601988,219602468,219602705,219605608,219605956,219606195,219606476,219606712,219607053,219608047,219608583,219609097,219609363,219611604,219611955,219613128,219613752,219614161,219614476,219615094,219616044	219597923,219598180,219601440,219601715,219602083,219602575,219602776,219605734,219606059,219606290,219606517,219606858,219607137,219608430,219608788,219609213,219609540,219611834,219612058,219613225,219613930,219614242,219614546,219615341,219616451	Gene ID= ENSG00000144589.21 TPM= 26.85 Transcript Type= protein_coding
chr2	221418029	221572290	221418029	221572290	-	ENST00000281821.6@EPHA4	ENST00000281821.6	protein_coding	221572158,221568718,221563731,221501017,221482352,221457866,221456613,221455547,221446123,221443493,221442829,221437061,221436399,221434142,221429958,221426464,221425209,221418029	221572290,221568785,221564394,221501172,221482690,221457990,221456772,221455658,221446181,221443606,221443014,221437122,221436608,221434291,221430151,221426619,221426142,221420552	Gene ID= ENSG00000116106.11 TPM= 3.5 Transcript Type= protein_coding
chr2	222318471	222321722	222318471	222321722	+	ENST00000555502.5@AC010980.1	ENST00000555502.5	transcribed_unprocessed_pseudogene	222318471,222321467	222319370,222321722	Gene ID= ENSG00000237732.9 TPM= 1.17 Transcript Type= processed_transcript
chr2	222424493	222562621	222424493	222562621	+	transcript9184.chr2.nnic@SGPP2	transcript9184.chr2.nnic	protein_coding	222424493,222474568,222521767,222524944,222558347,222560992	222424821,222474726,222521946,222525033,222559532,222562621	Gene ID= ENSG00000163082.9 TPM= 3.5 Transcript Type= NA
chr2	222571745	222656097	222571745	222656097	-	transcript9190.chr2.nnic@FARSB	transcript9190.chr2.nnic	protein_coding	222656016,222648740,222642851,222640862,222639580,222634391,222633199,222631604,222630113,222628837,222624714,222624272,222623650,222619645,222613811,222613267,222599928,222571745	222656097,222648795,222643005,222640931,222639695,222634541,222633307,222631674,222630174,222628888,222624775,222624479,222623730,222619737,222613928,222613380,222600083,222572022	Gene ID= ENSG00000116120.9 TPM= 2.34 Transcript Type= NA
chr2	222571745	222656097	222571745	222656097	-	transcript9194.chr2.nnic@FARSB	transcript9194.chr2.nnic	protein_coding	222656016,222648740,222646801,222642851,222640862,222639580,222634391,222633199,222631604,222630113,222628837,222624714,222624272,222623650,222619645,222613811,222599928,222571745	222656097,222648795,222646996,222643005,222640931,222639695,222634541,222633307,222631674,222630174,222628888,222624775,222624479,222623730,222619737,222613928,222600083,222572022	Gene ID= ENSG00000116120.9 TPM= 4.67 Transcript Type= NA
chr2	222570536	222656337	222570536	222656337	-	ENST00000281828.6@FARSB	ENST00000281828.6	protein_coding	222656016,222648740,222642851,222640862,222639580,222634391,222633199,222631604,222630113,222628837,222624714,222624272,222623650,222619645,222613811,222599928,222570536	222656337,222648795,222643005,222640931,222639695,222634541,222633307,222631674,222630174,222628888,222624775,222624479,222623730,222619737,222613928,222600083,222572022	Gene ID= ENSG00000116120.9 TPM= 1.17 Transcript Type= protein_coding
chr2	222860934	222944639	222860934	222944639	+	ENST00000357430.7@ACSL3	ENST00000357430.7	protein_coding	222860934,222887830,222900674,222908733,222916319,222918046,222919064,222921280,222922708,222923078,222924456,222927017,222928862,222930621,222933166,222934530,222941497	222861258,222887888,222900780,222909150,222916496,222918155,222919202,222921430,222922831,222923149,222924595,222927189,222928936,222930812,222933280,222934687,222944639	Gene ID= ENSG00000123983.13 TPM= 16.35 Transcript Type= protein_coding
chr2	222860942	222942222	222860942	222942222	+	ENST00000392066.7@ACSL3	ENST00000392066.7	protein_coding	222860942,222887830,222908733,222916319,222918046,222919064,222921280,222922708,222923078,222924456,222927017,222928862,222930621,222933166,222934530,222941497	222861258,222887888,222909150,222916496,222918155,222919202,222921430,222922831,222923149,222924595,222927189,222928936,222930812,222933280,222934687,222942222	Gene ID= ENSG00000123983.13 TPM= 40.87 Transcript Type= protein_coding
chr2	222861036	222925364	222861036	222925364	+	transcript9225.chr2.nic@ACSL3	transcript9225.chr2.nic	protein_coding	222861036,222887830,222908733,222916319,222918046,222919064,222921280,222922708,222923078,222924456	222861258,222887888,222909150,222916496,222918155,222919202,222921430,222922831,222923149,222925364	Gene ID= ENSG00000123983.13 TPM= 3.5 Transcript Type= NA
chr2	223875347	223945387	223875347	223945387	-	ENST00000233055.8@WDFY1	ENST00000233055.8	protein_coding	223945148,223917943,223912253,223905947,223901183,223898958,223895504,223894234,223884648,223881942,223880124,223875347	223945387,223918010,223912326,223906001,223901333,223899070,223895630,223894339,223884749,223882072,223880232,223878730	Gene ID= ENSG00000085449.14 TPM= 68.89 Transcript Type= protein_coding
chr2	223875348	223945379	223875348	223945379	-	transcript9236.chr2.nnic@WDFY1	transcript9236.chr2.nnic	protein_coding	223945148,223917943,223912253,223905947,223901183,223898958,223895504,223894234,223884648,223881942,223875348	223945379,223918010,223912326,223906001,223901333,223899070,223895630,223894339,223884749,223882072,223878730	Gene ID= ENSG00000085449.14 TPM= 7.01 Transcript Type= NA
chr2	223887400	223891393	223887400	223891393	+	transcript9240.chr2.nnic@NA	transcript9240.chr2.nnic	NA	223887400	223891393	Gene ID= novel_gene_chr2_9241 TPM= 5.84 Transcript Type= NA
chr2	223957404	223967714	223957404	223967714	+	ENST00000258383.3@MRPL44	ENST00000258383.3	protein_coding	223957404,223959534,223963756,223966863	223957651,223960002,223963934,223967714	Gene ID= ENSG00000135900.3 TPM= 31.53 Transcript Type= protein_coding
chr2	223975112	224039288	223975112	224039288	-	ENST00000409304.5@SERPINE2	ENST00000409304.5	protein_coding	224039099,224001642,223998115,223991803,223984752,223982681,223980311,223977544,223975112	224039288,224001922,223998342,223992000,223984950,223982781,223980397,223977627,223975904	Gene ID= ENSG00000135919.12 TPM= 11.68 Transcript Type= protein_coding
chr2	224378698	224402034	224378698	224402034	-	ENST00000409685.3@FAM124B	ENST00000409685.3	protein_coding	224401037,224378698	224402034,224380208	Gene ID= ENSG00000124019.9 TPM= 7.01 Transcript Type= protein_coding
chr2	224472748	224585410	224472748	224585410	-	transcript9255.chr2.nnic@CUL3	transcript9255.chr2.nnic	protein_coding	224585244,224584944,224557659,224535528,224514612,224513524,224511354,224506858,224505956,224503652,224502965,224500363,224497753,224495832,224481892,224478200,224472748	224585410,224585180,224557856,224535641,224514772,224513638,224511582,224507003,224506132,224503822,224503072,224500487,224497849,224495966,224482078,224478345,224474376	Gene ID= ENSG00000036257.12 TPM= 7.01 Transcript Type= NA
chr2	224470150	224585397	224470150	224585397	-	ENST00000344951.8@CUL3	ENST00000344951.8	protein_coding	224584944,224535528,224514612,224513524,224511354,224506858,224505956,224503652,224502965,224500363,224497753,224495832,224481892,224478200,224470150	224585397,224535641,224514772,224513638,224511582,224507003,224506132,224503822,224503072,224500487,224497849,224495966,224482078,224478345,224474376	Gene ID= ENSG00000036257.12 TPM= 3.5 Transcript Type= protein_coding
chr2	224470150	224585348	224470150	224585348	-	ENST00000264414.8@CUL3	ENST00000264414.8	protein_coding	224584944,224557659,224535528,224514612,224513524,224511354,224506858,224505956,224503652,224502965,224500363,224497753,224495832,224481892,224478200,224470150	224585348,224557856,224535641,224514772,224513638,224511582,224507003,224506132,224503822,224503072,224500487,224497849,224495966,224482078,224478345,224474376	Gene ID= ENSG00000036257.12 TPM= 4.67 Transcript Type= protein_coding
chr2	224765090	225042442	224765090	225042442	-	ENST00000258390.11@DOCK10	ENST00000258390.11	protein_coding	225042252,224931549,224916695,224896295,224886459,224886063,224885671,224876038,224874666,224874266,224873996,224864866,224864553,224862664,224856860,224854963,224852935,224852377,224849507,224845519,224845203,224844753,224841804,224839954,224837762,224834150,224830541,224823501,224819446,224816617,224814320,224807911,224807668,224806126,224805408,224805206,224805058,224804794,224804112,224801916,224800151,224797832,224796964,224796316,224794879,224793400,224792974,224789064,224787275,224787022,224778138,224774905,224773157,224770545,224770211,224765090	225042442,224931668,224916784,224896377,224886531,224886185,224885805,224876221,224874751,224874349,224874151,224865087,224864675,224862746,224856982,224855042,224853122,224852442,224849599,224845642,224845324,224844839,224841896,224840072,224837831,224834263,224830612,224823647,224819529,224816713,224814364,224808086,224807784,224806237,224805529,224805320,224805124,224804841,224804213,224802040,224800263,224797969,224797146,224796426,224795094,224793457,224793072,224789170,224787397,224787135,224778284,224775115,224773347,224770645,224770349,224765837	Gene ID= ENSG00000135905.18 TPM= 10.51 Transcript Type= protein_coding
chr2	225698514	225703654	225698514	225703654	+	ENST00000609089.1@AC016717.2	ENST00000609089.1	lincRNA	225698514	225703654	Gene ID= ENSG00000273301.1 TPM= 2.34 Transcript Type= lincRNA
chr2	226731317	226799759	226731317	226799759	-	ENST00000305123.5@IRS1	ENST00000305123.5	protein_coding	226794989,226731317	226799759,226736250	Gene ID= ENSG00000169047.5 TPM= 19.85 Transcript Type= protein_coding
chr2	226793022	226795224	226793022	226795224	-	transcript9272.chr2.nnic@NA	transcript9272.chr2.nnic	NA	226793022	226795224	Gene ID= novel_gene_chr2_9273 TPM= 3.5 Transcript Type= NA
chr2	226836054	226997842	226836054	226997842	+	transcript9310.chr2.nnic@RHBDD1	transcript9310.chr2.nnic	protein_coding	226836054,226837548,226838073,226839409,226864604,226867186,226906793,226908822,226914208,226995431	226836087,226837770,226838154,226839627,226865126,226867318,226906881,226908878,226914351,226997842	Gene ID= ENSG00000144468.16 TPM= 2.34 Transcript Type= NA
chr2	226835955	226999201	226835955	226999201	+	ENST00000392062.6@RHBDD1	ENST00000392062.6	protein_coding	226835955,226838073,226839409,226864604,226867186,226906793,226908822,226914208,226995431	226836087,226838154,226839627,226865126,226867318,226906881,226908878,226914351,226999201	Gene ID= ENSG00000144468.16 TPM= 2.34 Transcript Type= protein_coding
chr2	226836058	226996527	226836058	226996527	+	transcript9317.chr2.nic@RHBDD1	transcript9317.chr2.nic	protein_coding	226836058,226838073,226864604,226867186,226906793,226908822,226914208,226995431	226837770,226838154,226865126,226867318,226906881,226908878,226914351,226996527	Gene ID= ENSG00000144468.16 TPM= 4.09 Transcript Type= NA
chr2	226836066	226967371	226836066	226967371	+	transcript9318.chr2.nnic@RHBDD1	transcript9318.chr2.nnic	protein_coding	226836066,226839409,226864604,226867186,226906793,226908822,226914208,226967096	226837838,226839627,226865126,226867318,226906881,226908878,226914351,226967371	Gene ID= ENSG00000144468.16 TPM= 2.92 Transcript Type= NA
chr2	226835936	226999215	226835936	226999215	+	ENST00000341329.7@RHBDD1	ENST00000341329.7	protein_coding	226835936,226864604,226867186,226906793,226908822,226914208,226995431	226836087,226865126,226867318,226906881,226908878,226914351,226999215	Gene ID= ENSG00000144468.16 TPM= 14.01 Transcript Type= protein_coding
chr2	227164622	227304328	227164622	227304328	+	transcript9286.chr2.nic@COL4A3	transcript9286.chr2.nic	protein_coding	227164622,227237968,227240143,227244320,227244951,227245954,227246685,227247558,227248443,227251140,227251336,227253296,227253561,227254112,227254656,227256026,227256343,227257603,227259793,227261082,227263780,227266417,227266993,227269910,227270770,227272949,227276385,227277449,227279793,227280440,227280893,227282365,227283767,227284211,227289150,227289999,227290747,227293191,227294490,227294964,227295269,227297674,227298682,227303038,227303859,227304019	227164813,227238024,227240232,227244364,227244995,227246016,227246738,227247584,227248520,227251202,227251371,227253337,227253638,227254174,227254715,227256070,227256396,227257644,227259877,227261117,227263944,227266509,227267088,227269980,227270952,227273117,227276477,227277553,227279890,227280590,227281006,227282532,227283856,227284345,227289248,227290088,227290886,227293317,227294570,227295062,227295316,227297859,227298812,227303110,227303930,227304328	Gene ID= ENSG00000169031.18 TPM= 4.09 Transcript Type= NA
chr2	227164557	227291592	227164557	227291592	+	transcript9299.chr2.nic@COL4A3	transcript9299.chr2.nic	protein_coding	227164557,227237968,227240143,227244320,227244951,227245954,227246685,227247558,227248443,227251140,227251336,227253296,227253561,227254112,227254656,227256026,227256343,227257603,227259793,227261082,227263780,227266417,227266993,227269910,227270770,227272949,227276385,227277449,227279793,227280440,227280893,227282365,227283767,227284211,227289150,227289999,227290747	227164813,227238024,227240232,227244364,227244995,227246016,227246738,227247584,227248520,227251202,227251371,227253337,227253638,227254174,227254715,227256070,227256396,227257644,227259877,227261117,227263944,227266509,227267088,227269980,227270952,227273117,227276477,227277553,227279890,227280590,227281006,227282532,227283856,227284345,227289248,227290088,227291592	Gene ID= ENSG00000169031.18 TPM= 9.92 Transcript Type= NA
chr2	227164623	227274487	227164623	227274487	+	transcript9302.chr2.nic@COL4A3	transcript9302.chr2.nic	protein_coding	227164623,227237968,227240143,227244320,227244951,227245954,227246685,227247558,227248443,227251140,227251336,227253296,227253561,227254112,227254656,227256026,227256343,227257603,227259793,227261082,227263780,227266417,227266993,227269910,227270770,227272949	227164813,227238024,227240232,227244364,227244995,227246016,227246738,227247584,227248520,227251202,227251371,227253337,227253638,227254174,227254715,227256070,227256396,227257644,227259877,227261117,227263944,227266509,227267088,227269980,227270952,227274487	Gene ID= ENSG00000169031.18 TPM= 3.5 Transcript Type= NA
chr2	227325222	227357833	227325222	227357833	+	transcript9337.chr2.nic@MFF	transcript9337.chr2.nic	protein_coding	227325222,227328678,227330626,227332419,227340292,227342745,227347226,227352514,227355677,227356986	227325427,227328789,227330846,227332588,227340380,227342819,227347384,227352573,227355761,227357833	Gene ID= ENSG00000168958.19 TPM= 9.34 Transcript Type= NA
chr2	227325169	227357834	227325169	227357834	+	ENST00000304593.13@MFF	ENST00000304593.13	protein_coding	227325169,227328678,227330626,227332419,227340292,227347226,227352514,227355677,227356986	227325427,227328789,227330846,227332588,227340380,227347384,227352573,227355761,227357834	Gene ID= ENSG00000168958.19 TPM= 24.52 Transcript Type= protein_coding
chr2	227325247	227357833	227325247	227357833	+	transcript9341.chr2.nic@MFF	transcript9341.chr2.nic	protein_coding	227325247,227330626,227332419,227340292,227342745,227347226,227352514,227355677,227356986	227325427,227330846,227332588,227340380,227342819,227347384,227352573,227355761,227357833	Gene ID= ENSG00000168958.19 TPM= 4.67 Transcript Type= NA
chr2	227325221	227357254	227325221	227357254	+	ENST00000476924.5@MFF	ENST00000476924.5	protein_coding	227325221,227332419,227340292,227355677,227356986	227325427,227332588,227340380,227355761,227357254	Gene ID= ENSG00000168958.19 TPM= 1.17 Transcript Type= processed_transcript
chr2	227325276	227357812	227325276	227357812	+	ENST00000349901.11@MFF	ENST00000349901.11	protein_coding	227325276,227328678,227330626,227332419,227340292,227352514,227355677,227356986	227325427,227328789,227330846,227332588,227340380,227352573,227355761,227357812	Gene ID= ENSG00000168958.19 TPM= 7.01 Transcript Type= protein_coding
chr2	227325239	227357833	227325239	227357833	+	ENST00000353339.7@MFF	ENST00000353339.7	protein_coding	227325239,227328678,227329606,227330626,227332419,227340292,227342745,227347226,227352514,227355677,227356986	227325427,227328789,227329783,227330846,227332588,227340380,227342819,227347384,227352573,227355761,227357833	Gene ID= ENSG00000168958.19 TPM= 1.17 Transcript Type= protein_coding
chr2	227325271	227357131	227325271	227357131	+	ENST00000524634.5@MFF	ENST00000524634.5	protein_coding	227325271,227332419,227340292,227355677,227356986	227325427,227332588,227340380,227355761,227357131	Gene ID= ENSG00000168958.19 TPM= 1.17 Transcript Type= protein_coding
chr2	227325250	227357215	227325250	227357215	+	ENST00000354503.10@MFF	ENST00000354503.10	protein_coding	227325250,227328678,227330626,227332419,227340292,227355677,227356986	227325427,227328789,227330846,227332588,227340380,227355761,227357215	Gene ID= ENSG00000168958.19 TPM= 4.67 Transcript Type= protein_coding
chr2	227325259	227357799	227325259	227357799	+	ENST00000409565.5@MFF	ENST00000409565.5	protein_coding	227325259,227330626,227332419,227340292,227355677,227356986	227325427,227330846,227332588,227340380,227355761,227357799	Gene ID= ENSG00000168958.19 TPM= 2.34 Transcript Type= protein_coding
chr2	227325268	227357833	227325268	227357833	+	ENST00000337110.11@MFF	ENST00000337110.11	protein_coding	227325268,227328678,227330626,227332419,227340292,227342745,227355677,227356986	227325427,227328789,227330846,227332588,227340380,227342819,227355761,227357833	Gene ID= ENSG00000168958.19 TPM= 1.17 Transcript Type= protein_coding
chr2	227526541	227528417	227526541	227528417	-	transcript9382.chr2.nnic@NA	transcript9382.chr2.nnic	NA	227526541	227528417	Gene ID= novel_gene_chr2_9383 TPM= 32.69 Transcript Type= NA
chr2	227813842	227817564	227813842	227817564	+	ENST00000409189.7@CCL20	ENST00000409189.7	protein_coding	227813842,227815457,227816307,227817062	227813987,227815568,227816384,227817564	Gene ID= ENSG00000115009.11 TPM= 3.5 Transcript Type= protein_coding
chr2	229023975	229271262	229023975	229271262	-	transcript9393.chr2.nnic@PID1	transcript9393.chr2.nnic	protein_coding	229271014,229155818,229025240,229023975	229271262,229155964,229026108,229024925	Gene ID= ENSG00000153823.18 TPM= 2.63 Transcript Type= NA
chr2	229023995	229271285	229023995	229271285	-	ENST00000392055.7@PID1	ENST00000392055.7	protein_coding	229271014,229155818,229023995	229271285,229155964,229026108	Gene ID= ENSG00000153823.18 TPM= 59.26 Transcript Type= protein_coding
chr2	229023974	229271265	229023974	229271265	-	ENST00000392054.7@PID1	ENST00000392054.7	protein_coding	229271014,229262683,229155818,229023974	229271265,229262893,229155964,229026108	Gene ID= ENSG00000153823.18 TPM= 6.71 Transcript Type= protein_coding
chr2	229263017	229267937	229263017	229267937	+	transcript9399.chr2.nnic@NA	transcript9399.chr2.nnic	NA	229263017	229267937	Gene ID= novel_gene_chr2_9400 TPM= 3.5 Transcript Type= NA
chr2	229767212	229921793	229767212	229921793	-	transcript9411.chr2.nic@TRIP12	transcript9411.chr2.nic	protein_coding	229921564,229879982,229860406,229858772,229840822,229836848,229830756,229829193,229818364,229815273,229815099,229814233,229813870,229811136,229810880,229808252,229807708,229805730,229803999,229803571,229802252,229799283,229798875,229797690,229796591,229795179,229792973,229792153,229791866,229791124,229789611,229788798,229787505,229785757,229778876,229778433,229777315,229774097,229771519,229769231,229768616,229767212	229921793,229880128,229860531,229859574,229840927,229836984,229830839,229829288,229818512,229815308,229815194,229814325,229814031,229811204,229811045,229808369,229807864,229805883,229804227,229803689,229802459,229799383,229799049,229797831,229796782,229795330,229793145,229792226,229792065,229791251,229789762,229788940,229787661,229785855,229778990,229778587,229777479,229774261,229771632,229769325,229768719,229767750	Gene ID= ENSG00000153827.13 TPM= 7.59 Transcript Type= NA
chr2	229767212	229922014	229767212	229922014	-	transcript9412.chr2.nic@TRIP12	transcript9412.chr2.nic	protein_coding	229921880,229879982,229860406,229858772,229840822,229836848,229830756,229829193,229818364,229815273,229815099,229814233,229813870,229811136,229810880,229808252,229807708,229805730,229803999,229803571,229802252,229799283,229798875,229797690,229796591,229795179,229792973,229792153,229791866,229791124,229789611,229788798,229787505,229785757,229778876,229778433,229777315,229774097,229771519,229769231,229768616,229767212	229922014,229880128,229860531,229859574,229840927,229836984,229830839,229829288,229818512,229815308,229815194,229814325,229814031,229811204,229811045,229808369,229807864,229805883,229804227,229803689,229802459,229799383,229799049,229797831,229796782,229795330,229793145,229792226,229792065,229791251,229789762,229788940,229787661,229785855,229778990,229778587,229777479,229774261,229771632,229769325,229768719,229767750	Gene ID= ENSG00000153827.13 TPM= 6.42 Transcript Type= NA
chr2	229767212	229921969	229767212	229921969	-	transcript9417.chr2.nnic@TRIP12	transcript9417.chr2.nnic	protein_coding	229921880,229879982,229858772,229840822,229836848,229830756,229829193,229818364,229815273,229815099,229814233,229813870,229811136,229810880,229808252,229807708,229805730,229803999,229803571,229802252,229799283,229798875,229797690,229796591,229795179,229792973,229792153,229791866,229791124,229789611,229788798,229787505,229785757,229778876,229778433,229777315,229774097,229771519,229769231,229768616,229767212	229921969,229880128,229859574,229840927,229836984,229830839,229829288,229818512,229815308,229815194,229814325,229814031,229811204,229811045,229808369,229807864,229805883,229804227,229803689,229802459,229799383,229799049,229797831,229796782,229795330,229793130,229792226,229792065,229791251,229789762,229788940,229787661,229785855,229778990,229778587,229777479,229774261,229771632,229769325,229768719,229767750	Gene ID= ENSG00000153827.13 TPM= 7.01 Transcript Type= NA
chr2	229767212	229921793	229767212	229921793	-	transcript9419.chr2.nic@TRIP12	transcript9419.chr2.nic	protein_coding	229921564,229879982,229858772,229840822,229836848,229830756,229829193,229818364,229815273,229815099,229814233,229813870,229811136,229810880,229808252,229807708,229805730,229803999,229803571,229802252,229799283,229798875,229797690,229796591,229795179,229792973,229792153,229791866,229791124,229789611,229788798,229787505,229785757,229778876,229778433,229777315,229774097,229771519,229769231,229768616,229767212	229921793,229880128,229859574,229840927,229836984,229830839,229829288,229818512,229815308,229815194,229814325,229814031,229811204,229811045,229808369,229807864,229805883,229804227,229803689,229802459,229799383,229799049,229797831,229796782,229795330,229793145,229792226,229792065,229791251,229789762,229788940,229787661,229785855,229778990,229778587,229777479,229774261,229771632,229769325,229768719,229767750	Gene ID= ENSG00000153827.13 TPM= 12.84 Transcript Type= NA
chr2	229831888	229921963	229831888	229921963	-	transcript9428.chr2.nic@TRIP12	transcript9428.chr2.nic	protein_coding	229921880,229879982,229860406,229858772,229840822,229831888	229921963,229880128,229860531,229859574,229840927,229836984	Gene ID= ENSG00000153827.13 TPM= 2.92 Transcript Type= NA
chr2	229831888	229921995	229831888	229921995	-	transcript9431.chr2.nic@TRIP12	transcript9431.chr2.nic	protein_coding	229921880,229879982,229858772,229840822,229831888	229921995,229880128,229859574,229840927,229836984	Gene ID= ENSG00000153827.13 TPM= 2.92 Transcript Type= NA
chr2	229922496	230013109	229922496	230013109	+	ENST00000283946.7@FBXO36	ENST00000283946.7	protein_coding	229922496,229976241,229996751,230010696	229922609,229976349,229996923,230013109	Gene ID= ENSG00000153832.11 TPM= 1.17 Transcript Type= protein_coding
chr2	230034974	230068999	230034974	230068999	-	ENST00000295190.8@SLC16A14	ENST00000295190.8	protein_coding	230068555,230059094,230049761,230045745,230034974	230068999,230059366,230049904,230046722,230037531	Gene ID= ENSG00000163053.10 TPM= 14.01 Transcript Type= protein_coding
chr2	230176475	230220112	230176475	230220112	-	ENST00000258382.9@SP110	ENST00000258382.9	protein_coding	230219874,230216781,230214950,230212761,230212347,230211470,230209931,230207991,230202579,230200885,230185994,230183572,230178157,230177538,230176475	230220112,230216928,230215118,230213027,230212430,230211553,230210008,230208059,230202728,230200965,230186143,230183640,230178255,230177680,230176724	Gene ID= ENSG00000135899.17 TPM= 35.03 Transcript Type= protein_coding
chr2	230176475	230220014	230176475	230220014	-	transcript9451.chr2.nnic@SP110	transcript9451.chr2.nnic	protein_coding	230219874,230216781,230214950,230212761,230212347,230211470,230209931,230207991,230200885,230185994,230183572,230178157,230177538,230176475	230220014,230216928,230215118,230213027,230212430,230211553,230210008,230208059,230200965,230186143,230183640,230178255,230177680,230176724	Gene ID= ENSG00000135899.17 TPM= 3.5 Transcript Type= NA
chr2	230168936	230219951	230168936	230219951	-	ENST00000358662.8@SP110	ENST00000358662.8	protein_coding	230219874,230216781,230214950,230212761,230212347,230211470,230209931,230207991,230202579,230200885,230185994,230183572,230178157,230177538,230172844,230172066,230170621,230168936	230219951,230216928,230215118,230213027,230212430,230211553,230210008,230208059,230202728,230200965,230186143,230183640,230178255,230177680,230172959,230172174,230170761,230169237	Gene ID= ENSG00000135899.17 TPM= 2.34 Transcript Type= protein_coding
chr2	230168918	230219950	230168918	230219950	-	ENST00000258381.10@SP110	ENST00000258381.10	protein_coding	230219874,230216781,230214950,230212761,230212347,230211470,230209931,230207991,230202579,230200885,230185994,230183572,230178157,230177538,230172844,230172066,230171696,230170621,230168918	230219950,230216928,230215118,230213027,230212430,230211553,230210008,230208059,230202728,230200965,230186143,230183640,230178255,230177680,230172959,230172174,230171767,230170761,230169237	Gene ID= ENSG00000135899.17 TPM= 2.34 Transcript Type= protein_coding
chr2	230225731	230313212	230225731	230313212	+	ENST00000392045.7@SP140	ENST00000392045.7	protein_coding	230225731,230237083,230238213,230241404,230243731,230244988,230245863,230247916,230248885,230250981,230253316,230255452,230269532,230269837,230270586,230284346,230285752,230287892,230290460,230292646,230294271,230297421,230309924,230310743,230311154,230311452,230312586	230225903,230237260,230238381,230241487,230243811,230245080,230245940,230248065,230248968,230251061,230253417,230255532,230269618,230269953,230270639,230284411,230285832,230287966,230290564,230292788,230294318,230297462,230310039,230310851,230311231,230311595,230313212	Gene ID= ENSG00000079263.18 TPM= 3.5 Transcript Type= protein_coding
chr2	230327142	230403732	230327142	230403732	+	transcript9465.chr2.nic@SP140L	transcript9465.chr2.nic	protein_coding	230327142,230328757,230357805,230358964,230361614,230370908,230371598,230383510,230385224,230388559,230389919,230393414,230396757,230400127,230400334,230400955,230401366,230401664,230402798	230327301,230328831,230357967,230359132,230361697,230370967,230371651,230383575,230385304,230388633,230392229,230393461,230396798,230400242,230400413,230401063,230401443,230401807,230403732	Gene ID= ENSG00000185404.16 TPM= 2.34 Transcript Type= NA
chr2	230327142	230403732	230327142	230403732	+	transcript9468.chr2.nic@SP140L	transcript9468.chr2.nic	protein_coding	230327142,230328757,230357805,230358964,230361614,230370908,230371598,230383510,230385224,230388559,230392087,230393414,230396757,230400127,230400955,230401366,230401664,230402798	230327301,230328831,230357967,230359132,230361697,230370967,230371651,230383575,230385304,230388633,230392229,230393461,230396798,230400242,230401063,230401443,230401807,230403732	Gene ID= ENSG00000185404.16 TPM= 2.34 Transcript Type= NA
chr2	230327184	230403732	230327184	230403732	+	ENST00000415673.6@SP140L	ENST00000415673.6	protein_coding	230327184,230328757,230357805,230358964,230361614,230370908,230371598,230383510,230385224,230388559,230389919,230392087,230393414,230396757,230400127,230400955,230401366,230401664,230402798	230327301,230328831,230357967,230359132,230361697,230370967,230371651,230383575,230385304,230388633,230390023,230392229,230393461,230396798,230400242,230401063,230401443,230401807,230403732	Gene ID= ENSG00000185404.16 TPM= 14.01 Transcript Type= protein_coding
chr2	230406980	230408311	230406980	230408311	+	transcript9477.chr2.nnic@NA	transcript9477.chr2.nnic	NA	230406980	230408311	Gene ID= novel_gene_chr2_9478 TPM= 2.34 Transcript Type= NA
chr2	230415942	230516527	230415942	230516527	+	ENST00000264052.9@SP100	ENST00000264052.9	protein_coding	230415942,230417591,230442937,230444178,230446819,230449088,230449561,230450172,230461262,230462435,230464067,230466301,230467120,230469043,230470015,230473324,230474394,230494416,230498461,230503066,230504186,230506303,230507993,230511125,230515095	230416328,230417665,230443099,230444346,230446902,230449150,230449710,230450255,230461414,230462518,230464150,230466354,230467215,230469096,230470098,230473440,230474447,230494460,230498535,230503110,230504290,230506445,230508031,230511166,230516527	Gene ID= ENSG00000067066.16 TPM= 4.83 Transcript Type= protein_coding
chr2	230416201	230508146	230416201	230508146	+	transcript9501.chr2.nic@SP100	transcript9501.chr2.nic	protein_coding	230416201,230417591,230442937,230444178,230446819,230449088,230449561,230450172,230461262,230462435,230464067,230466301,230467120,230469043,230470015,230473384,230474394,230494416,230498461,230503066,230504186,230506303,230507993	230416328,230417665,230443099,230444346,230446902,230449150,230449710,230450255,230461414,230462518,230464150,230466354,230467215,230469096,230470098,230473440,230474447,230494460,230498535,230503110,230504290,230506445,230508146	Gene ID= ENSG00000067066.16 TPM= 6 Transcript Type= NA
chr2	230416156	230470534	230416156	230470534	+	ENST00000427101.6@SP100	ENST00000427101.6	protein_coding	230416156,230442937,230444178,230446819,230449088,230449561,230450172,230461262,230462435,230464067,230466301,230467120,230469043,230470015	230416328,230443099,230444346,230446902,230449150,230449710,230450255,230461414,230462518,230464150,230466354,230467206,230469096,230470534	Gene ID= ENSG00000067066.16 TPM= 6 Transcript Type= protein_coding
chr2	230416247	230470517	230416247	230470517	+	ENST00000409341.5@SP100	ENST00000409341.5	protein_coding	230416247,230417591,230442937,230444178,230446819,230449088,230449561,230450172,230461262,230462435,230464067,230466301,230467120,230469043,230470015	230416328,230417665,230443099,230444346,230446902,230449150,230449710,230450255,230461414,230462518,230464150,230466354,230467215,230469096,230470517	Gene ID= ENSG00000067066.16 TPM= 42.2 Transcript Type= protein_coding
chr2	230712845	230821075	230712845	230821075	+	ENST00000258418.9@CAB39	ENST00000258418.9	protein_coding	230712845,230759959,230790872,230793213,230798729,230810263,230814049,230817754,230818516	230713230,230760115,230791036,230793331,230798897,230810322,230814114,230817897,230821075	Gene ID= ENSG00000135932.10 TPM= 274.38 Transcript Type= protein_coding
chr2	230799786	230802526	230799786	230802526	+	transcript9548.chr2.nnic@NA	transcript9548.chr2.nnic	NA	230799786	230802526	Gene ID= novel_gene_chr2_9549 TPM= 2.34 Transcript Type= NA
chr2	230810307	230813376	230810307	230813376	-	transcript9550.chr2.nnic@NA	transcript9550.chr2.nnic	NA	230810307	230813376	Gene ID= novel_gene_chr2_9551 TPM= 2.34 Transcript Type= NA
chr2	230864900	230879247	230864900	230879247	+	ENST00000326427.10@ITM2C	ENST00000326427.10	protein_coding	230864900,230873417,230875620,230876857,230877400,230878008	230865145,230873557,230875808,230876967,230877550,230879247	Gene ID= ENSG00000135916.15 TPM= 115.98 Transcript Type= protein_coding
chr2	230864948	230879247	230864948	230879247	+	ENST00000335005.10@ITM2C	ENST00000335005.10	protein_coding	230864948,230875620,230876857,230877400,230878008	230865145,230875808,230876967,230877550,230879247	Gene ID= ENSG00000135916.15 TPM= 9.73 Transcript Type= protein_coding
chr2	230864980	230879248	230864980	230879248	+	ENST00000326407.10@ITM2C	ENST00000326407.10	protein_coding	230864980,230873417,230875620,230877400,230878008	230865145,230873557,230875808,230877550,230879248	Gene ID= ENSG00000135916.15 TPM= 9.73 Transcript Type= protein_coding
chr2	231037490	231049714	231037490	231049714	+	ENST00000373640.4@C2orf72	ENST00000373640.4	protein_coding	231037490,231041296,231046882	231038199,231041409,231049714	Gene ID= ENSG00000204128.5 TPM= 5.84 Transcript Type= protein_coding
chr2	231056856	231165287	231056856	231165287	+	transcript9565.chr2.nic@PSMD1	transcript9565.chr2.nic	protein_coding	231056856,231061267,231062248,231062506,231066906,231070025,231072189,231075511,231077034,231078659,231079536,231080141,231082883,231083567,231085019,231087117,231138736,231146240,231153564,231161340,231163635,231165200	231057041,231061310,231062321,231062675,231067111,231070168,231072415,231075571,231077162,231078747,231079614,231080314,231082994,231083763,231085114,231087181,231138850,231146356,231153666,231161509,231163727,231165287	Gene ID= ENSG00000173692.12 TPM= 3.74 Transcript Type= NA
chr2	231056864	231172827	231056864	231172827	+	ENST00000308696.10@PSMD1	ENST00000308696.10	protein_coding	231056864,231061267,231062248,231062506,231066906,231070025,231072189,231075511,231077034,231078659,231079536,231080141,231082883,231083567,231085019,231087117,231138736,231146240,231153564,231161340,231163635,231165200,231165871,231170566,231172535	231057041,231061310,231062321,231062675,231067111,231070168,231072415,231075571,231077162,231078747,231079614,231080314,231082994,231083763,231085114,231087181,231138850,231146356,231153666,231161509,231163727,231165286,231166017,231170721,231172827	Gene ID= ENSG00000173692.12 TPM= 7.24 Transcript Type= protein_coding
chr2	231108230	231125118	231108230	231125118	-	ENST00000258400.3@HTR2B	ENST00000258400.3	protein_coding	231124972,231123413,231113729,231108230	231125118,231124130,231113929,231109409	Gene ID= ENSG00000135914.5 TPM= 3.5 Transcript Type= protein_coding
chr2	231108230	231125104	231108230	231125104	-	transcript9573.chr2.nnic@HTR2B	transcript9573.chr2.nnic	protein_coding	231124972,231113729,231108230	231125104,231113929,231109409	Gene ID= ENSG00000135914.5 TPM= 2.34 Transcript Type= NA
chr2	231198546	231345202	231198546	231345202	+	ENST00000349938.8@ARMC9	ENST00000349938.8	protein_coding	231198546,231206198,231208127,231214831,231216638,231222728,231226774,231235224,231239943,231256586,231258991,231262306,231270982,231272955,231276636,231278382,231282059,231291353,231296198,231331793,231344975	231198698,231206289,231208252,231215001,231216793,231222820,231226798,231235381,231240041,231256620,231259102,231262398,231271072,231273078,231276775,231278458,231282133,231291443,231296253,231331897,231345202	Gene ID= ENSG00000135931.17 TPM= 10.51 Transcript Type= protein_coding
chr2	231270421	231345202	231270421	231345202	+	transcript9586.chr2.nic@ARMC9	transcript9586.chr2.nic	protein_coding	231270421,231270982,231272955,231276636,231278382,231282059,231291353,231296198,231331793,231344975	231270700,231271072,231273078,231276775,231278458,231282133,231291443,231296253,231331897,231345202	Gene ID= ENSG00000135931.17 TPM= 5.25 Transcript Type= NA
chr2	231270435	231345202	231270435	231345202	+	transcript9588.chr2.nic@ARMC9	transcript9588.chr2.nic	protein_coding	231270435,231272955,231276636,231278382,231282059,231291353,231296198,231331793,231344975	231271072,231273078,231276775,231278458,231282133,231291443,231296253,231331897,231345202	Gene ID= ENSG00000135931.17 TPM= 11.09 Transcript Type= NA
chr2	231375207	231376848	231375207	231376848	+	transcript9592.chr2.nnic@NA	transcript9592.chr2.nnic	NA	231375207	231376848	Gene ID= novel_gene_chr2_9593 TPM= 2.34 Transcript Type= NA
chr2	231395744	231401164	231395744	231401164	+	transcript9595.chr2.nnic@B3GNT7	transcript9595.chr2.nnic	protein_coding	231395744,231397731,231400145	231395814,231399679,231401164	Gene ID= ENSG00000156966.6 TPM= 2.34 Transcript Type= NA
chr2	231395543	231401164	231395543	231401164	+	ENST00000287590.5@B3GNT7	ENST00000287590.5	protein_coding	231395543,231397731	231395814,231401164	Gene ID= ENSG00000156966.6 TPM= 65.39 Transcript Type= protein_coding
chr2	231453531	231464594	231453531	231464594	-	ENST00000322723.8@NCL	ENST00000322723.8	protein_coding	231464336,231463200,231461540,231460669,231460478,231460152,231459001,231458266,231457643,231457001,231456631,231456010,231455401,231453531	231464594,231463316,231462017,231460866,231460564,231460293,231459125,231458389,231457800,231457124,231456764,231456136,231455624,231455267	Gene ID= ENSG00000115053.15 TPM= 109.75 Transcript Type= protein_coding
chr2	231454908	231464183	231454908	231464183	-	transcript9601.chr2.nic@NCL	transcript9601.chr2.nic	protein_coding	231464143,231463200,231461540,231460669,231460478,231460152,231459001,231458266,231457643,231457001,231456631,231456010,231455401,231454908	231464183,231463316,231462017,231460866,231460564,231460293,231459125,231458389,231457800,231457124,231456764,231456136,231455624,231455267	Gene ID= ENSG00000115053.15 TPM= 8.17 Transcript Type= NA
chr2	231464215	231465086	231464215	231465086	+	transcript9619.chr2.nnic@NA	transcript9619.chr2.nnic	NA	231464215	231465086	Gene ID= novel_gene_chr2_9620 TPM= 2.34 Transcript Type= NA
chr2	231516200	231518149	231516200	231518149	-	transcript9625.chr2.nnic@NA	transcript9625.chr2.nnic	NA	231516200	231518149	Gene ID= novel_gene_chr2_9626 TPM= 2.34 Transcript Type= NA
chr2	231523160	231530495	231523160	231530495	-	ENST00000305141.4@NMUR1	ENST00000305141.4	protein_coding	231530359,231528123,231523160	231530495,231529017,231525425	Gene ID= ENSG00000171596.6 TPM= 12.84 Transcript Type= protein_coding
chr2	231603730	231604755	231603730	231604755	-	transcript9627.chr2.nnic@NA	transcript9627.chr2.nnic	NA	231603730	231604755	Gene ID= novel_gene_chr2_9628 TPM= 2.34 Transcript Type= NA
chr2	231708516	231713536	231708516	231713536	+	ENST00000341369.11@PTMA	ENST00000341369.11	protein_coding	231708516,231711348,231711887,231712443,231712804	231708751,231711419,231711983,231712516,231713536	Gene ID= ENSG00000187514.16 TPM= 140.11 Transcript Type= protein_coding
chr2	231708530	231713506	231708530	231713506	+	ENST00000481928.1@PTMA	ENST00000481928.1	protein_coding	231708530,231711348,231712443,231712804	231708751,231711983,231712516,231713506	Gene ID= ENSG00000187514.16 TPM= 1.17 Transcript Type= retained_intron
chr2	231708536	231713289	231708536	231713289	+	ENST00000409683.5@PTMA	ENST00000409683.5	protein_coding	231708536,231711348,231711890,231712452,231712804	231708751,231711419,231711983,231712516,231713289	Gene ID= ENSG00000187514.16 TPM= 2.34 Transcript Type= protein_coding
chr2	231731720	231734463	231731720	231734463	+	transcript9645.chr2.nnic@NA	transcript9645.chr2.nnic	NA	231731720	231734463	Gene ID= novel_gene_chr2_9646 TPM= 2.34 Transcript Type= NA
chr2	231732425	231781309	231732425	231781309	-	ENST00000287600.8@PDE6D	ENST00000287600.8	protein_coding	231781065,231739100,231738013,231737187,231732425	231781309,231739188,231738138,231737292,231733033	Gene ID= ENSG00000156973.13 TPM= 24.52 Transcript Type= protein_coding
chr2	231786445	231808723	231786445	231808723	+	ENST00000410017.5@COPS7B	ENST00000410017.5	protein_coding	231786445,231788555,231791733,231794263,231796106,231798859,231801140,231807487	231786538,231788732,231791808,231794351,231796308,231798964,231801207,231808723	Gene ID= ENSG00000144524.17 TPM= 1.17 Transcript Type= protein_coding
chr2	231786414	231809253	231786414	231809253	+	ENST00000350033.7@COPS7B	ENST00000350033.7	protein_coding	231786414,231788555,231791733,231794263,231796106,231798859,231807487	231786538,231788732,231791808,231794351,231796308,231798964,231809253	Gene ID= ENSG00000144524.17 TPM= 4.67 Transcript Type= protein_coding
chr2	231786444	231808723	231786444	231808723	+	transcript9657.chr2.nic@COPS7B	transcript9657.chr2.nic	protein_coding	231786444,231788555,231794263,231796106,231798859,231801140,231807487	231786538,231788732,231794351,231796308,231798964,231801207,231808723	Gene ID= ENSG00000144524.17 TPM= 2.34 Transcript Type= NA
chr2	231786445	231808764	231786445	231808764	+	ENST00000412922.6@COPS7B	ENST00000412922.6	protein_coding	231786445,231788555,231791733,231796106,231798859,231807487	231786538,231788732,231791808,231796308,231798964,231808764	Gene ID= ENSG00000144524.17 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr2	231961583	232337197	231961583	232337197	+	ENST00000325385.11@DIS3L2	ENST00000325385.11	protein_coding	231961583,232014835,232015514,232024277,232029979,232087487,232130619,232136472,232163459,232210326,232238533,232249239,232263207,232300040,232329813,232330690,232333840,232334369,232334631,232335773,232336469	231961765,232014979,232015671,232024330,232030080,232087721,232130719,232136719,232163632,232210405,232238645,232249346,232263440,232300119,232329996,232330776,232333987,232334499,232334735,232335874,232337197	Gene ID= ENSG00000144535.19 TPM= 8.17 Transcript Type= protein_coding
chr2	232374686	232377306	232374686	232377306	+	transcript9665.chr2.nnic@NA	transcript9665.chr2.nnic	NA	232374686	232377306	Gene ID= novel_gene_chr2_9666 TPM= 7.01 Transcript Type= NA
chr2	232378534	232382889	232378534	232382889	+	ENST00000392027.2@ALPP	ENST00000392027.2	protein_coding	232378534,232378971,232379200,232379513,232379764,232380186,232380420,232380623,232380840,232381251,232381497	232378878,232379087,232379315,232379687,232379936,232380320,232380492,232380757,232381031,232381367,232382889	Gene ID= ENSG00000163283.6 TPM= 11.68 Transcript Type= protein_coding
chr2	232385743	232387741	232385743	232387741	-	transcript9668.chr2.nnic@NA	transcript9668.chr2.nnic	NA	232385743	232387741	Gene ID= novel_gene_chr2_9669 TPM= 5.84 Transcript Type= NA
chr2	232548067	232550622	232548067	232550622	-	transcript9670.chr2.nnic@NA	transcript9670.chr2.nnic	NA	232548067	232550622	Gene ID= novel_gene_chr2_9671 TPM= 8.17 Transcript Type= NA
chr2	232550052	232569210	232550052	232569210	+	ENST00000258416.7@EIF4E2	ENST00000258416.7	protein_coding	232550052,232556416,232557884,232564247,232566829,232567078,232568945	232550744,232556530,232558018,232564351,232566981,232567214,232569210	Gene ID= ENSG00000135930.13 TPM= 35.03 Transcript Type= protein_coding
chr2	232550623	232569210	232550623	232569210	+	transcript9683.chr2.nic@EIF4E2	transcript9683.chr2.nic	protein_coding	232550623,232556416,232557884,232564247,232566829	232550744,232556530,232558018,232564351,232569210	Gene ID= ENSG00000135930.13 TPM= 2.34 Transcript Type= NA
chr2	232550683	232583644	232550683	232583644	+	ENST00000409098.5@EIF4E2	ENST00000409098.5	protein_coding	232550683,232556416,232557884,232564247,232566829,232567078,232580904	232550744,232556530,232558018,232564351,232566981,232567214,232583644	Gene ID= ENSG00000135930.13 TPM= 28.02 Transcript Type= protein_coding
chr2	232550683	232583642	232550683	232583642	+	ENST00000409514.5@EIF4E2	ENST00000409514.5	protein_coding	232550683,232556416,232557884,232564247,232566829,232567078,232574263,232580904	232550744,232556530,232558018,232564351,232566981,232567214,232574341,232583642	Gene ID= ENSG00000135930.13 TPM= 25.69 Transcript Type= protein_coding
chr2	232633228	232682781	232633228	232682781	+	ENST00000264059.7@EFHD1	ENST00000264059.7	protein_coding	232633228,232662802,232672309,232681585	232634006,232662949,232672443,232682781	Gene ID= ENSG00000115468.11 TPM= 42.03 Transcript Type= protein_coding
chr2	232697322	232857832	232697322	232857832	+	transcript9692.chr2.nic@GIGYF2	transcript9692.chr2.nic	protein_coding	232697322,232703424,232724574,232731122,232735155,232747615,232748987,232756223,232760480,232761396,232787150,232790698,232791008,232791258,232794748,232796062,232806491,232809720,232811244,232812391,232815637,232816871,232819827,232832857,232839849,232844046,232844369,232845732,232847348,232850262,232856793	232697392,232703489,232724691,232731234,232735238,232747744,232749082,232756334,232760591,232761436,232787329,232790915,232791170,232791446,232794944,232796221,232806657,232809811,232811351,232812491,232815737,232817032,232819985,232833093,232839971,232844255,232844574,232845886,232847571,232850409,232857832	Gene ID= ENSG00000204120.14 TPM= 2.34 Transcript Type= NA
chr2	232697322	232858608	232697322	232858608	+	transcript9696.chr2.nic@GIGYF2	transcript9696.chr2.nic	protein_coding	232697322,232700585,232703424,232735155,232747615,232748987,232756223,232760480,232761396,232787150,232790698,232791008,232791258,232794748,232796062,232806491,232809720,232811244,232812391,232815637,232816871,232819827,232832857,232839849,232844046,232844369,232845732,232847348,232850262,232856793	232697392,232700654,232703489,232735238,232747744,232749082,232756334,232760591,232761436,232787329,232790915,232791170,232791446,232794944,232796221,232806657,232809811,232811351,232812491,232815737,232817032,232819985,232833093,232839971,232844255,232844574,232845886,232847571,232850409,232858608	Gene ID= ENSG00000204120.14 TPM= 3.5 Transcript Type= NA
chr2	232697307	232858612	232697307	232858612	+	ENST00000373563.8@GIGYF2	ENST00000373563.8	protein_coding	232697307,232703424,232735155,232747615,232748987,232756223,232760480,232761396,232787150,232790698,232791008,232791258,232794748,232796062,232806491,232809720,232811244,232812391,232815637,232816871,232819827,232832857,232839849,232844046,232844369,232845732,232847348,232850262,232856793	232697392,232703489,232735238,232747744,232749082,232756334,232760591,232761436,232787329,232790915,232791170,232791446,232794944,232796221,232806657,232809811,232811351,232812491,232815737,232817032,232819985,232833093,232839971,232844255,232844574,232845886,232847571,232850409,232858612	Gene ID= ENSG00000204120.14 TPM= 3.89 Transcript Type= protein_coding
chr2	232697338	232858627	232697338	232858627	+	ENST00000409196.7@GIGYF2	ENST00000409196.7	protein_coding	232697338,232735155,232747615,232748987,232756223,232760480,232761396,232787150,232790716,232791008,232791258,232794748,232796062,232806491,232809720,232811244,232812391,232815637,232816871,232819827,232832857,232839849,232844046,232844369,232845732,232847348,232850262,232856793	232697392,232735238,232747744,232749082,232756334,232760591,232761436,232787329,232790915,232791170,232791446,232794944,232796221,232806657,232809811,232811351,232812491,232815737,232817032,232819985,232833093,232839971,232844255,232844574,232845886,232847571,232850409,232858627	Gene ID= ENSG00000204120.14 TPM= 2.72 Transcript Type= protein_coding
chr2	232697331	232858627	232697331	232858627	+	ENST00000409547.5@GIGYF2	ENST00000409547.5	protein_coding	232697331,232700585,232703424,232734417,232735155,232747615,232748987,232756223,232760480,232761396,232787150,232790698,232791008,232791258,232794748,232796062,232806491,232809720,232811244,232812391,232815637,232816871,232819827,232832857,232839849,232844046,232844369,232845732,232847348,232850262,232856793	232697392,232700654,232703489,232734486,232735238,232747744,232749082,232756334,232760591,232761436,232787329,232790915,232791170,232791446,232794944,232796221,232806657,232809811,232811351,232812491,232815737,232817032,232819985,232833093,232839971,232844255,232844574,232845886,232847571,232850409,232858627	Gene ID= ENSG00000204120.14 TPM= 3.89 Transcript Type= protein_coding
chr2	233059967	233207903	233059967	233207903	+	ENST00000359570.9@INPP5D	ENST00000359570.9	protein_coding	233059967,233079335,233122107,233125748,233130508,233139842,233146162,233146367,233147471,233158313,233161724,233163707,233164307,233169305,233170026,233170496,233171064,233177265,233182410,233184408,233185843,233189850,233193812,233195399,233198095,233204126,233206706	233060612,233079398,233122257,233125919,233130648,233139929,233146242,233146438,233147594,233158419,233161826,233163903,233164424,233169401,233170164,233170604,233171152,233177346,233182499,233184521,233185925,233189937,233193961,233195495,233198376,233204717,233207903	Gene ID= ENSG00000168918.13 TPM= 41.45 Transcript Type= protein_coding
chr2	233060398	233207902	233060398	233207902	+	ENST00000445964.5@INPP5D	ENST00000445964.5	protein_coding	233060398,233079335,233122107,233125745,233130508,233139842,233146162,233146367,233147471,233158313,233161724,233163707,233164307,233169305,233170026,233170496,233171064,233177265,233182410,233184408,233185843,233189850,233193812,233195399,233198095,233204126,233206706	233060612,233079398,233122257,233125919,233130648,233139929,233146242,233146438,233147594,233158419,233161826,233163903,233164424,233169401,233170164,233170604,233171152,233177346,233182499,233184521,233185925,233189937,233193961,233195495,233198376,233204717,233207902	Gene ID= ENSG00000168918.13 TPM= 21.6 Transcript Type= protein_coding
chr2	233251571	233295674	233251571	233295674	+	ENST00000392017.8@ATG16L1	ENST00000392017.8	protein_coding	233251571,233256102,233263130,233263992,233264892,233270002,233272966,233273721,233274676,233277568,233281105,233282682,233289854,233290248,233292128,233292387,233293256,233294257	233251942,233256195,233263235,233264065,233265143,233270067,233273052,233273777,233274778,233277673,233281175,233282753,233289974,233290353,233292277,233292434,233293357,233295674	Gene ID= ENSG00000085978.21 TPM= 19.85 Transcript Type= protein_coding
chr2	233251682	233295666	233251682	233295666	+	ENST00000479942.5@ATG16L1	ENST00000479942.5	protein_coding	233251682,233256102,233263130,233263992,233264892,233270002,233272966,233273721,233274676,233277568,233281105,233282682,233289854,233292128,233292387,233293256,233294257	233251942,233256195,233263235,233264065,233265143,233270067,233273052,233273777,233274778,233277673,233281175,233282753,233290353,233292277,233292434,233293357,233295666	Gene ID= ENSG00000085978.21 TPM= 4.67 Transcript Type= retained_intron
chr2	233251673	233295674	233251673	233295674	+	ENST00000392021.7@ATG16L1	ENST00000392021.7	protein_coding	233251673,233256102,233263130,233263992,233264892,233270002,233272966,233273721,233274676,233277568,233281105,233282682,233289854,233290248,233292128,233292387,233293256,233294257	233251940,233256195,233263235,233264065,233265143,233270067,233273052,233273777,233274778,233277673,233281175,233282753,233289974,233290353,233292277,233292434,233293357,233295674	Gene ID= ENSG00000085978.21 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr2	233251706	233295674	233251706	233295674	+	ENST00000392020.8@ATG16L1	ENST00000392020.8	protein_coding	233251706,233256102,233263130,233263992,233264892,233270002,233272966,233274676,233277568,233281105,233282682,233289854,233290248,233292128,233292387,233293256,233294257	233251942,233256195,233263235,233264065,233265143,233270067,233273052,233274778,233277673,233281175,233282753,233289974,233290353,233292277,233292434,233293357,233295674	Gene ID= ENSG00000085978.21 TPM= 2.34 Transcript Type= protein_coding
chr2	233354486	233472098	233354486	233472098	+	transcript9730.chr2.nnic@DGKD	transcript9730.chr2.nnic	protein_coding	233354486,233388257,233390403,233434380,233434769,233435818,233436316,233437377,233438217,233441887,233445623,233446712,233448087,233448276,233449103,233449982,233450922,233451964,233454763,233456899,233457221,233458284,233459757,233460194,233462348,233462643,233464164,233467086,233469371	233354674,233388367,233390483,233434484,233434901,233435924,233436441,233437479,233438379,233441995,233445762,233446796,233448181,233448375,233449376,233450131,233451050,233452060,233454873,233456995,233457328,233458397,233459891,233460345,233462459,233462735,233464283,233467203,233472098	Gene ID= ENSG00000077044.10 TPM= 34.44 Transcript Type= NA
chr2	233354507	233472100	233354507	233472100	+	ENST00000264057.6@DGKD	ENST00000264057.6	protein_coding	233354507,233388257,233390403,233434380,233434769,233435818,233436316,233437377,233438217,233441887,233445623,233446712,233448087,233448276,233449103,233449982,233450922,233451964,233454763,233456899,233457221,233458284,233459757,233460194,233462348,233462643,233464164,233467086,233468423,233469371	233354674,233388367,233390483,233434484,233434901,233435924,233436441,233437479,233438379,233441995,233445762,233446796,233448181,233448375,233449376,233450131,233451050,233452060,233454873,233456995,233457328,233458397,233459891,233460345,233462459,233462735,233464283,233467203,233468553,233472100	Gene ID= ENSG00000077044.10 TPM= 60.13 Transcript Type= protein_coding
chr2	233475526	233566782	233475526	233566782	-	ENST00000251722.10@USP40	ENST00000251722.10	protein_coding	233566684,233565356,233562736,233559811,233556855,233554380,233551376,233549101,233542268,233540662,233533479,233529431,233527407,233525478,233524492,233523170,233520991,233519614,233512569,233511709,233510049,233499879,233498548,233496758,233493425,233491167,233489365,233488239,233485767,233485531,233481203,233475526	233566782,233565573,233562803,233559924,233557019,233554526,233551519,233549229,233542363,233540766,233533779,233529512,233527578,233525562,233524562,233523489,233521114,233519671,233512622,233511797,233510135,233499915,233498612,233496832,233493551,233491261,233489483,233488304,233485977,233485626,233481297,233477503	Gene ID= ENSG00000085982.13 TPM= 20.43 Transcript Type= protein_coding
chr2	233487681	233566782	233487681	233566782	-	transcript9746.chr2.nnic@USP40	transcript9746.chr2.nnic	protein_coding	233566684,233565356,233562736,233559811,233556855,233554380,233551376,233549101,233542268,233540662,233533479,233529431,233527407,233525478,233524492,233523170,233520991,233519614,233512569,233511709,233510049,233499879,233498548,233496758,233493425,233491167,233489365,233488239,233487681	233566782,233565573,233562803,233559924,233557019,233554526,233551519,233549229,233542363,233540769,233533779,233529512,233527578,233525562,233524562,233523489,233521114,233519671,233512622,233511797,233510135,233499915,233498612,233496832,233493551,233491261,233489483,233488304,233488016	Gene ID= ENSG00000085982.13 TPM= 2.92 Transcript Type= NA
chr2	233836703	233854566	233836703	233854566	-	ENST00000411486.6@HJURP	ENST00000411486.6	protein_coding	233854384,233853844,233852565,233849763,233847397,233845728,233844205,233840609,233836703	233854566,233853910,233852620,233849859,233847461,233845820,233844283,233842205,233837652	Gene ID= ENSG00000123485.11 TPM= 2.34 Transcript Type= protein_coding
chr2	233865437	233868444	233865437	233868444	-	ENST00000438684.1@MSL3P1	ENST00000438684.1	transcribed_processed_pseudogene	233868327,233865437	233868444,233867350	Gene ID= ENSG00000224287.2 TPM= 5.84 Transcript Type= processed_transcript
chr2	234494582	234497081	234494582	234497081	-	transcript9757.chr2.nnic@ARL4C	transcript9757.chr2.nnic	protein_coding	234496012,234495728,234494582	234497081,234495836,234495613	Gene ID= ENSG00000188042.7 TPM= 2.34 Transcript Type= NA
chr2	234493041	234497053	234493041	234497053	-	ENST00000390645.2@ARL4C	ENST00000390645.2	protein_coding	234493041	234497053	Gene ID= ENSG00000188042.7 TPM= 18.68 Transcript Type= protein_coding
chr2	234951973	235055714	234951973	235055714	+	ENST00000392011.6@SH3BP4	ENST00000392011.6	protein_coding	234951973,234995303,235034871,235040888,235052562,235053592	234952170,234995376,235035120,235043247,235052750,235055714	Gene ID= ENSG00000130147.15 TPM= 18.68 Transcript Type= protein_coding
chr2	234952035	234953190	234952035	234953190	+	ENST00000484097.1@SH3BP4	ENST00000484097.1	protein_coding	234952035,234952715	234952170,234953190	Gene ID= ENSG00000130147.15 TPM= 2.34 Transcript Type= processed_transcript
chr2	235494090	235496771	235494090	235496771	+	transcript9773.chr2.nnic@NA	transcript9773.chr2.nnic	NA	235494090	235496771	Gene ID= novel_gene_chr2_9774 TPM= 2.34 Transcript Type= NA
chr2	235669604	236126554	235669604	236126554	+	ENST00000409538.5@AGAP1	ENST00000409538.5	protein_coding	235669604,235709179,235717557,235740963,235744698,235750354,235797759,235799367,235807239,235883345,235908738,235968462,236036561,236040751,236049059,236120192,236123919	235671057,235709237,235717644,235741048,235744839,235750488,235797886,235799522,235807331,235883449,235908906,235968623,236036715,236040841,236049281,236120447,236126554	Gene ID= ENSG00000157985.18 TPM= 2.34 Transcript Type= protein_coding
chr2	235810835	235812989	235810835	235812989	-	transcript9779.chr2.nnic@NA	transcript9779.chr2.nnic	NA	235810835	235812989	Gene ID= novel_gene_chr2_9780 TPM= 8.17 Transcript Type= NA
chr2	235884454	235887642	235884454	235887642	-	transcript9781.chr2.nnic@NA	transcript9781.chr2.nnic	NA	235884454	235887642	Gene ID= novel_gene_chr2_9782 TPM= 2.34 Transcript Type= NA
chr2	235887481	235890951	235887481	235890951	+	transcript9777.chr2.nnic@NA	transcript9777.chr2.nnic	NA	235887481	235890951	Gene ID= novel_gene_chr2_9778 TPM= 2.34 Transcript Type= NA
chr2	236324151	236507542	236324151	236507542	-	ENST00000409907.7@IQCA1	ENST00000409907.7	protein_coding	236507257,236497163,236493768,236488000,236486829,236465505,236441040,236419149,236399413,236392244,236391976,236380569,236377103,236368194,236363780,236344557,236338205,236331359,236324151	236507542,236497487,236493887,236488191,236486900,236465710,236441124,236419271,236399488,236392350,236392071,236380633,236377185,236368301,236363979,236344643,236338382,236331597,236324783	Gene ID= ENSG00000132321.16 TPM= 2.34 Transcript Type= protein_coding
chr2	236569641	236582358	236569641	236582358	+	ENST00000272928.3@ACKR3	ENST00000272928.3	protein_coding	236569641,236580440	236569924,236582358	Gene ID= ENSG00000144476.5 TPM= 8.17 Transcript Type= protein_coding
chr2	237083604	237085762	237083604	237085762	-	transcript9791.chr2.nnic@NA	transcript9791.chr2.nnic	NA	237083604	237085762	Gene ID= novel_gene_chr2_9792 TPM= 2.34 Transcript Type= NA
chr2	237085312	237100466	237085312	237100466	+	ENST00000354371.6@COPS8	ENST00000354371.6	protein_coding	237085312,237087127,237088605,237089862,237094090,237095822,237096822,237097663	237086042,237087197,237088653,237089994,237094197,237095884,237096869,237100466	Gene ID= ENSG00000198612.10 TPM= 2.34 Transcript Type= protein_coding
chr2	237486380	237553994	237486380	237553994	+	transcript9814.chr2.nic@MLPH	transcript9814.chr2.nic	protein_coding	237486380,237487398,237493403,237510574,237510989,237518539,237519910,237525601,237527377,237540348,237540802,237542567,237546606,237549221,237552337,237553566	237486738,237487437,237493536,237510795,237511101,237518648,237520029,237525805,237527516,237540533,237540957,237542659,237546683,237549278,237552437,237553994	Gene ID= ENSG00000115648.13 TPM= 17.65 Transcript Type= NA
chr2	237487247	237553994	237487247	237553994	+	transcript9836.chr2.nic@MLPH	transcript9836.chr2.nic	protein_coding	237487247,237493403,237510574,237510989,237518539,237519910,237525601,237527377,237534564,237540348,237542567,237546606,237549221,237552337,237553566	237487437,237493536,237510795,237511101,237518648,237520029,237525805,237527516,237534647,237540533,237542659,237546683,237549278,237552437,237553994	Gene ID= ENSG00000115648.13 TPM= 13.17 Transcript Type= NA
chr2	237487245	237553994	237487245	237553994	+	transcript9837.chr2.nic@MLPH	transcript9837.chr2.nic	protein_coding	237487245,237493403,237510574,237510989,237518539,237519910,237525601,237527377,237540348,237540802,237542567,237545457,237549221,237552337,237553566	237487437,237493536,237510795,237511101,237518648,237520029,237525805,237527516,237540533,237540957,237542659,237546683,237549278,237552437,237553994	Gene ID= ENSG00000115648.13 TPM= 31.17 Transcript Type= NA
chr2	237487245	237553994	237487245	237553994	+	transcript9846.chr2.nic@MLPH	transcript9846.chr2.nic	protein_coding	237487245,237493403,237510574,237510989,237518539,237519910,237525601,237527377,237540348,237542567,237546606,237549221,237552337,237553566	237487437,237493536,237510795,237511101,237518648,237520029,237525805,237527516,237540533,237542659,237546683,237549278,237552437,237553994	Gene ID= ENSG00000115648.13 TPM= 15.55 Transcript Type= NA
chr2	237487196	237553994	237487196	237553994	+	transcript9850.chr2.nic@MLPH	transcript9850.chr2.nic	protein_coding	237487196,237493403,237510574,237510989,237518539,237525601,237527377,237540348,237540802,237542567,237546606,237549221,237552337,237553566	237487437,237493536,237510795,237511101,237518648,237525805,237527516,237540533,237540957,237542659,237546683,237549278,237552437,237553994	Gene ID= ENSG00000115648.13 TPM= 33.65 Transcript Type= NA
chr2	237487251	237553994	237487251	237553994	+	ENST00000338530.8@MLPH	ENST00000338530.8	protein_coding	237487251,237493403,237510574,237510989,237518539,237519910,237525601,237527377,237540348,237540802,237542567,237546606,237549221,237552337,237553566	237487437,237493536,237510795,237511101,237518648,237520029,237525805,237527516,237540533,237540957,237542659,237546683,237549278,237552437,237553994	Gene ID= ENSG00000115648.13 TPM= 233.99 Transcript Type= protein_coding
chr2	237487276	237553994	237487276	237553994	+	ENST00000409373.5@MLPH	ENST00000409373.5	protein_coding	237487276,237493403,237510574,237510989,237518539,237525601,237527377,237540348,237542567,237546606,237549221,237552337,237553566	237487437,237493536,237510795,237511101,237518648,237525805,237527516,237540533,237542659,237546683,237549278,237552437,237553994	Gene ID= ENSG00000115648.13 TPM= 8.45 Transcript Type= protein_coding
chr2	237518029	237553991	237518029	237553991	+	ENST00000464123.5@MLPH	ENST00000464123.5	protein_coding	237518029,237519910,237525601,237527377,237540348,237540802,237542567,237546606,237549221,237552337,237553566	237518648,237520029,237525805,237527516,237540533,237540957,237542659,237546683,237549278,237552437,237553991	Gene ID= ENSG00000115648.13 TPM= 10.66 Transcript Type= retained_intron
chr2	237511269	237513366	237511269	237513366	-	transcript9869.chr2.nnic@NA	transcript9869.chr2.nnic	NA	237511269	237513366	Gene ID= novel_gene_chr2_9870 TPM= 130.77 Transcript Type= NA
chr2	237533392	237537362	237533392	237537362	-	transcript9873.chr2.nnic@NA	transcript9873.chr2.nnic	NA	237533392	237537362	Gene ID= novel_gene_chr2_9874 TPM= 42.03 Transcript Type= NA
chr2	237574326	237590734	237574326	237590734	-	transcript9881.chr2.nic@RAB17	transcript9881.chr2.nic	protein_coding	237590467,237586064,237578004,237577257,237575387,237574326	237590734,237586157,237578155,237577382,237575480,237575128	Gene ID= ENSG00000124839.12 TPM= 10.89 Transcript Type= NA
chr2	237574326	237590800	237574326	237590800	-	transcript9882.chr2.nnic@RAB17	transcript9882.chr2.nnic	protein_coding	237590467,237585998,237578004,237577257,237575387,237574326	237590800,237586157,237578155,237577382,237575508,237575128	Gene ID= ENSG00000124839.12 TPM= 13.23 Transcript Type= NA
chr2	237574326	237591085	237574326	237591085	-	transcript9887.chr2.nic@RAB17	transcript9887.chr2.nic	protein_coding	237590467,237585998,237578004,237575387,237574326	237591085,237586157,237578155,237577382,237575128	Gene ID= ENSG00000124839.12 TPM= 11.68 Transcript Type= NA
chr2	237574322	237591093	237574322	237591093	-	ENST00000264601.7@RAB17	ENST00000264601.7	protein_coding	237590467,237585998,237578004,237577257,237575387,237574322	237591093,237586157,237578155,237577382,237575480,237575128	Gene ID= ENSG00000124839.12 TPM= 86.79 Transcript Type= protein_coding
chr2	237574355	237590715	237574355	237590715	-	ENST00000414278.1@RAB17	ENST00000414278.1	protein_coding	237590467,237586042,237578004,237577257,237575387,237574355	237590715,237586157,237578155,237577382,237575480,237575128	Gene ID= ENSG00000124839.12 TPM= 12.84 Transcript Type= nonsense_mediated_decay
chr2	237574326	237579549	237574326	237579549	-	transcript9889.chr2.nnic@NA	transcript9889.chr2.nnic	NA	237574326	237579549	Gene ID= novel_gene_chr2_9890 TPM= 3.5 Transcript Type= NA
chr2	237692134	237780315	237692134	237780315	+	transcript9896.chr2.nic@LRRFIP1	transcript9896.chr2.nic	protein_coding	237692134,237708544,237748364,237749199,237751200,237753309,237756095,237760064,237769943,237772081,237772866,237774358,237779422	237692521,237708630,237748399,237749324,237751271,237753479,237756187,237760205,237769992,237772198,237772945,237774462,237780315	Gene ID= ENSG00000124831.18 TPM= 6.42 Transcript Type= NA
chr2	237627572	237765460	237627572	237765460	+	transcript9920.chr2.nic@LRRFIP1	transcript9920.chr2.nic	protein_coding	237627572,237708544,237748364,237749199,237753309,237756095,237760064,237762603	237627740,237708630,237748399,237749324,237753479,237756187,237760205,237765460	Gene ID= ENSG00000124831.18 TPM= 14.59 Transcript Type= NA
chr2	237692145	237765279	237692145	237765279	+	ENST00000289175.10@LRRFIP1	ENST00000289175.10	protein_coding	237692145,237708544,237748364,237749199,237753309,237756095,237760064,237762603	237692521,237708630,237748399,237749324,237753479,237756187,237760205,237765279	Gene ID= ENSG00000124831.18 TPM= 13.43 Transcript Type= protein_coding
chr2	237779882	237783656	237779882	237783656	-	transcript9934.chr2.nnic@NA	transcript9934.chr2.nnic	NA	237779882	237783656	Gene ID= novel_gene_chr2_9935 TPM= 3.5 Transcript Type= NA
chr2	237779882	237783656	237779882	237783656	-	transcript9936.chr2.nnic@NA	transcript9936.chr2.nnic	NA	237779882	237783656	Gene ID= novel_gene_chr2_9937 TPM= 2.34 Transcript Type= NA
chr2	237859544	237912114	237859544	237912114	+	ENST00000254661.4@RAMP1	ENST00000254661.4	protein_coding	237859544,237877224,237911528	237859727,237877362,237912114	Gene ID= ENSG00000132329.10 TPM= 11.68 Transcript Type= protein_coding
chr2	237967014	238041545	237967014	238041545	+	ENST00000409633.5@UBE2F	ENST00000409633.5	protein_coding	237967014,237973092,237987963,237994744,238016566,238025342,238030556,238032222,238041288	237967132,237973225,237987992,237994809,238016633,238025412,238030613,238032254,238041545	Gene ID= ENSG00000184182.18 TPM= 1.17 Transcript Type= protein_coding
chr2	238061022	238094849	238061022	238094849	+	transcript9959.chr2.nic@SCLY	transcript9959.chr2.nic	protein_coding	238061022,238064357,238068065,238069297,238081709,238082045,238083248,238091218,238093861,238094420	238061143,238064469,238068165,238069477,238081836,238082209,238083354,238091254,238093944,238094849	Gene ID= ENSG00000132330.16 TPM= 2.34 Transcript Type= NA
chr2	238061002	238099412	238061002	238099412	+	transcript9960.chr2.nic@SCLY	transcript9960.chr2.nic	protein_coding	238061002,238064357,238081709,238082045,238083248,238091218,238093861,238094420,238096801,238098202	238061143,238064469,238081836,238082209,238083354,238091254,238093944,238094522,238096876,238099412	Gene ID= ENSG00000132330.16 TPM= 5.84 Transcript Type= NA
chr2	238061031	238092083	238061031	238092083	+	ENST00000409736.6@SCLY	ENST00000409736.6	protein_coding	238061031,238064357,238068065,238069297,238081709,238082045,238083248,238091218	238061143,238064469,238068165,238069477,238081836,238082209,238083354,238092083	Gene ID= ENSG00000132330.16 TPM= 1.17 Transcript Type= protein_coding
chr2	238170402	238203675	238170402	238203675	-	transcript9968.chr2.nic@ILKAP	transcript9968.chr2.nic	protein_coding	238203499,238194782,238194275,238189853,238188131,238185181,238184020,238183653,238182065,238173534,238170943,238170402	238203675,238194870,238194331,238189972,238188257,238185287,238184113,238183740,238182186,238173653,238171024,238170676	Gene ID= ENSG00000132323.8 TPM= 5.03 Transcript Type= NA
chr2	238170402	238203628	238170402	238203628	-	transcript9973.chr2.nic@ILKAP	transcript9973.chr2.nic	protein_coding	238203499,238194782,238194275,238188131,238185181,238184020,238183653,238182065,238173534,238170943,238170402	238203628,238194870,238194331,238189972,238185287,238184113,238183740,238182186,238173653,238171024,238170676	Gene ID= ENSG00000132323.8 TPM= 2.5 Transcript Type= NA
chr2	238170402	238203680	238170402	238203680	-	transcript9975.chr2.nnic@ILKAP	transcript9975.chr2.nnic	protein_coding	238203499,238194805,238194275,238189863,238185181,238184020,238183653,238182065,238173534,238170943,238170402	238203680,238194870,238194331,238189972,238185287,238184113,238183740,238182186,238173653,238171024,238170676	Gene ID= ENSG00000132323.8 TPM= 2.53 Transcript Type= NA
chr2	238170401	238203729	238170401	238203729	-	ENST00000254654.7@ILKAP	ENST00000254654.7	protein_coding	238203499,238194805,238194275,238189853,238188131,238185181,238184020,238183653,238182065,238173534,238170943,238170401	238203729,238194870,238194331,238189972,238188257,238185287,238184113,238183740,238182186,238173653,238171024,238170676	Gene ID= ENSG00000132323.8 TPM= 56.41 Transcript Type= protein_coding
chr2	238170403	238203683	238170403	238203683	-	ENST00000622223.4@ILKAP	ENST00000622223.4	protein_coding	238203499,238194805,238194275,238184020,238183653,238182065,238173534,238170943,238170403	238203683,238194870,238194331,238184113,238183740,238182186,238173653,238171024,238170676	Gene ID= ENSG00000132323.8 TPM= 1.37 Transcript Type= protein_coding
chr2	238170402	238203638	238170402	238203638	-	ENST00000463129.5@ILKAP	ENST00000463129.5	protein_coding	238203499,238194275,238189863,238188131,238185181,238184020,238183653,238182065,238173534,238170943,238170402	238203638,238194870,238189972,238188257,238185287,238184113,238183740,238182186,238173653,238171024,238170676	Gene ID= ENSG00000132323.8 TPM= 1.33 Transcript Type= retained_intron
chr2	238220643	238231700	238220643	238231700	-	transcript9981.chr2.nnic@AC016757.1	transcript9981.chr2.nnic	processed_transcript	238231334,238227684,238224547,238220643	238231700,238227798,238224873,238223395	Gene ID= ENSG00000186235.10 TPM= 2.34 Transcript Type= NA
chr2	238238267	238240124	238238267	238240124	-	ENST00000272937.9@HES6	ENST00000272937.9	protein_coding	238239825,238239661,238239487,238238267	238240124,238239747,238239568,238239251	Gene ID= ENSG00000144485.10 TPM= 11.68 Transcript Type= protein_coding
chr2	238238270	238240038	238238270	238240038	-	ENST00000409160.7@HES6	ENST00000409160.7	protein_coding	238239825,238239661,238238270	238240038,238239747,238239568	Gene ID= ENSG00000144485.10 TPM= 12.84 Transcript Type= protein_coding
chr2	238320441	238400822	238320441	238400822	+	ENST00000391993.7@TRAF3IP1	ENST00000391993.7	protein_coding	238320441,238325306,238325809,238328686,238328926,238332824,238333960,238347455,238348764,238349325,238352827,238353173,238356004,238397459,238398754	238320785,238325374,238325970,238328829,238329342,238332895,238334035,238347475,238348848,238349408,238352950,238353209,238356080,238397679,238400822	Gene ID= ENSG00000204104.11 TPM= 8.17 Transcript Type= protein_coding
chr2	238320529	238400900	238320529	238400900	+	transcript9992.chr2.nic@TRAF3IP1	transcript9992.chr2.nic	protein_coding	238320529,238325306,238325809,238328686,238328926,238332824,238333960,238347455,238348764,238349325,238352827,238353173,238356004,238397459,238398754	238320813,238325374,238325970,238328829,238329342,238332895,238334035,238347475,238348848,238349408,238352950,238353209,238356080,238397679,238400900	Gene ID= ENSG00000204104.11 TPM= 4.67 Transcript Type= NA
chr2	238570216	238596632	238570216	238596632	+	transcript10004.chr2.nnic@NA	transcript10004.chr2.nnic	NA	238570216,238570716,238594942	238570414,238570816,238596632	Gene ID= novel_gene_chr2_10005 TPM= 2.34 Transcript Type= NA
chr2	238588721	238591707	238588721	238591707	+	transcript10007.chr2.nnic@NA	transcript10007.chr2.nnic	NA	238588721	238591707	Gene ID= novel_gene_chr2_10005 TPM= 2.34 Transcript Type= NA
chr2	238848032	238910543	238848032	238910543	+	ENST00000612363.1@TWIST2	ENST00000612363.1	protein_coding	238848032,238909842	238848733,238910543	Gene ID= ENSG00000233608.3 TPM= 5.84 Transcript Type= protein_coding
chr2	239093929	239094187	239093929	239094187	-	transcript10018.chr2.nnic@NA	transcript10018.chr2.nnic	NA	239093929	239094187	Gene ID= novel_gene_chr2_10019 TPM= 2.34 Transcript Type= NA
chr2	239396141	239398069	239396141	239398069	-	transcript10016.chr2.nnic@NA	transcript10016.chr2.nnic	NA	239396141	239398069	Gene ID= novel_gene_chr2_10017 TPM= 2.34 Transcript Type= NA
chr2	239957372	240025402	239957372	240025402	-	ENST00000252711.6@NDUFA10	ENST00000252711.6	protein_coding	240025227,240022172,240021197,240018553,240014739,240011617,240007316,240005210,239990074,239957372	240025402,240022340,240021412,240018639,240014860,240011696,240007370,240005295,239990182,239961186	Gene ID= ENSG00000130414.11 TPM= 113.26 Transcript Type= protein_coding
chr2	239960741	240025345	239960741	240025345	-	ENST00000620965.4@NDUFA10	ENST00000620965.4	protein_coding	240025245,240025227,240022172,240021197,240018553,240014739,240011617,240007316,240005210,239990074,239960741	240025345,240025243,240022341,240021412,240018639,240014860,240011696,240007370,240005295,239990182,239961186	Gene ID= ENSG00000130414.11 TPM= 117.14 Transcript Type= protein_coding
chr2	239960741	240025323	239960741	240025323	-	ENST00000485344.6@NDUFA10	ENST00000485344.6	protein_coding	240025227,240022172,240021197,240018553,240011617,240007316,240005210,239990074,239960741	240025323,240022340,240021412,240018639,240014860,240007370,240005295,239990182,239961186	Gene ID= ENSG00000130414.11 TPM= 5.84 Transcript Type= retained_intron
chr2	240130826	240136303	240130826	240136303	-	ENST00000607357.1@COPS9	ENST00000607357.1	protein_coding	240136222,240133933,240130826	240136303,240134005,240131088	Gene ID= ENSG00000172428.10 TPM= 19.85 Transcript Type= protein_coding
chr2	240435671	240468078	240435671	240468078	+	ENST00000264039.6@GPC1	ENST00000264039.6	protein_coding	240435671,240459030,240462191,240463347,240464616,240464856,240465077,240465473,240466058	240436084,240459188,240462582,240463512,240464746,240464975,240465210,240465648,240468078	Gene ID= ENSG00000063660.8 TPM= 85.23 Transcript Type= protein_coding
chr2	240521939	240561091	240521939	240561091	-	ENST00000484526.5@ANKMY1	ENST00000484526.5	protein_coding	240560731,240525685,240521939	240561091,240525849,240524381	Gene ID= ENSG00000144504.15 TPM= 7.59 Transcript Type= retained_intron
chr2	240521938	240561091	240521938	240561091	-	ENST00000405002.5@ANKMY1	ENST00000405002.5	protein_coding	240560731,240554866,240552914,240525685,240521938	240561091,240555055,240553057,240525849,240524381	Gene ID= ENSG00000144504.15 TPM= 4.09 Transcript Type= protein_coding
chr2	240560054	240564014	240560054	240564014	+	ENST00000343217.6@DUSP28	ENST00000343217.6	protein_coding	240560054,240561330,240563674	240561077,240561519,240564014	Gene ID= ENSG00000188542.9 TPM= 4.67 Transcript Type= protein_coding
chr2	240560302	240564014	240560302	240564014	+	ENST00000405954.1@DUSP28	ENST00000405954.1	protein_coding	240560302,240561330	240561077,240564014	Gene ID= ENSG00000188542.9 TPM= 4.67 Transcript Type= protein_coding
chr2	240560792	240564014	240560792	240564014	+	ENST00000438823.1@DUSP28	ENST00000438823.1	protein_coding	240560792,240561330,240563674	240561077,240561519,240564014	Gene ID= ENSG00000188542.9 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr2	240568280	240578727	240568280	240578727	+	transcript10058.chr2.nic@RNPEPL1	transcript10058.chr2.nic	protein_coding	240568280,240572423,240573110,240573775,240574113,240574515,240575030,240575502,240576568,240576848,240577599	240569114,240572563,240573261,240573891,240574348,240574628,240575142,240575610,240576765,240576990,240578727	Gene ID= ENSG00000142327.12 TPM= 50.99 Transcript Type= NA
chr2	240568480	240578727	240568480	240578727	+	transcript10060.chr2.nnic@RNPEPL1	transcript10060.chr2.nnic	protein_coding	240568480,240572483,240573110,240573775,240574113,240574515,240575030,240575502,240576535,240576848,240577599	240569114,240572563,240573261,240573891,240574348,240574628,240575142,240575610,240576765,240576990,240578727	Gene ID= ENSG00000142327.12 TPM= 62.66 Transcript Type= NA
chr2	240568861	240578727	240568861	240578727	+	ENST00000486058.5@RNPEPL1	ENST00000486058.5	protein_coding	240568861,240572423,240573110,240573775,240575030,240575502,240576535,240576848,240577599	240569114,240572563,240573261,240574628,240575142,240575610,240576765,240576990,240578727	Gene ID= ENSG00000142327.12 TPM= 25.1 Transcript Type= retained_intron
chr2	240582700	240586699	240582700	240586699	-	ENST00000567819.1@CAPN10-AS1	ENST00000567819.1	antisense_RNA	240582700	240586699	Gene ID= ENSG00000260942.1 TPM= 1.17 Transcript Type= antisense_RNA
chr2	240586755	240599103	240586755	240599103	+	transcript10085.chr2.nic@CAPN10	transcript10085.chr2.nic	protein_coding	240586755,240589343,240590815,240591933,240593906,240594543,240595024,240595934,240596319,240596681,240597888,240598352,240598651	240587052,240589474,240591011,240592150,240594047,240594709,240595304,240596152,240596521,240596942,240598087,240598397,240599103	Gene ID= ENSG00000142330.19 TPM= 7.86 Transcript Type= NA
chr2	240586733	240599103	240586733	240599103	+	transcript10090.chr2.nic@CAPN10	transcript10090.chr2.nic	protein_coding	240586733,240589343,240590815,240591933,240593906,240594543,240595024,240595934,240596681,240597888,240598352,240598651	240587052,240589474,240591011,240592150,240594047,240594709,240595304,240596521,240596942,240598087,240598397,240599103	Gene ID= ENSG00000142330.19 TPM= 5.52 Transcript Type= NA
chr2	240586761	240599103	240586761	240599103	+	transcript10092.chr2.nnic@CAPN10	transcript10092.chr2.nnic	protein_coding	240586761,240589343,240590815,240591933,240593906,240594598,240595176,240596319,240596681,240597888,240598352,240598651	240587052,240589474,240591011,240592150,240594047,240594709,240595304,240596521,240596942,240598087,240598397,240599103	Gene ID= ENSG00000142330.19 TPM= 5.52 Transcript Type= NA
chr2	240586716	240599109	240586716	240599109	+	ENST00000391984.6@CAPN10	ENST00000391984.6	protein_coding	240586716,240589343,240590815,240591933,240593906,240594543,240595024,240596319,240596681,240597888,240598352,240598651	240587052,240589474,240591011,240592150,240594047,240594709,240595304,240596521,240596942,240598087,240598397,240599109	Gene ID= ENSG00000142330.19 TPM= 36.58 Transcript Type= protein_coding
chr2	240586383	240599103	240586383	240599103	+	transcript10097.chr2.nic@CAPN10	transcript10097.chr2.nic	protein_coding	240586383,240589343,240590815,240591933,240593906,240594543,240595024,240596681,240597888,240598352,240598651	240587052,240589474,240591011,240592150,240594047,240594709,240596521,240596942,240598087,240598397,240599103	Gene ID= ENSG00000142330.19 TPM= 4.94 Transcript Type= NA
chr2	240586756	240599103	240586756	240599103	+	transcript10103.chr2.nic@CAPN10	transcript10103.chr2.nic	protein_coding	240586756,240589343,240590815,240591933,240593906,240594543,240595024,240597888,240598352,240598651	240587052,240589474,240591011,240592150,240594047,240594709,240596942,240598087,240598397,240599103	Gene ID= ENSG00000142330.19 TPM= 6.11 Transcript Type= NA
chr2	240621032	240631241	240621032	240631241	+	transcript10111.chr2.nnic@GPR35	transcript10111.chr2.nnic	protein_coding	240621032,240629949	240623138,240631241	Gene ID= ENSG00000178623.11 TPM= 3.5 Transcript Type= NA
chr2	240627433	240631253	240627433	240631253	+	ENST00000438013.3@GPR35	ENST00000438013.3	protein_coding	240627433	240631253	Gene ID= ENSG00000178623.11 TPM= 8.17 Transcript Type= protein_coding
chr2	240886662	240896156	240886662	240896156	-	ENST00000388934.4@C2orf54	ENST00000388934.4	protein_coding	240895484,240891538,240890005,240888292,240886662	240896156,240891763,240890158,240888648,240887162	Gene ID= ENSG00000172478.17 TPM= 11.68 Transcript Type= protein_coding
chr2	241075541	241102322	241075541	241102322	-	transcript10130.chr2.nic@MTERF4	transcript10130.chr2.nic	protein_coding	241102253,241099396,241097243,241094277,241089980,241089188,241075541	241102322,241099894,241097427,241096438,241090044,241089365,241075682	Gene ID= ENSG00000122085.16 TPM= 4.67 Transcript Type= NA
chr2	241087801	241102322	241087801	241102322	-	transcript10131.chr2.nnic@MTERF4	transcript10131.chr2.nnic	protein_coding	241102253,241099396,241097243,241094597,241094277,241089980,241087801	241102322,241099894,241097427,241096438,241094432,241090044,241089365	Gene ID= ENSG00000122085.16 TPM= 2.34 Transcript Type= NA
chr2	241089169	241102322	241089169	241102322	-	transcript10135.chr2.nic@MTERF4	transcript10135.chr2.nic	protein_coding	241102253,241099396,241097243,241094277,241089980,241089169	241102322,241099894,241097427,241096438,241090044,241089365	Gene ID= ENSG00000122085.16 TPM= 2.34 Transcript Type= NA
chr2	241087225	241102331	241087225	241102331	-	ENST00000455202.6@MTERF4	ENST00000455202.6	protein_coding	241102253,241097243,241094277,241089980,241087225	241102331,241097427,241094432,241090044,241089365	Gene ID= ENSG00000122085.16 TPM= 2.34 Transcript Type= processed_transcript
chr2	241089041	241102320	241089041	241102320	-	ENST00000476564.5@MTERF4	ENST00000476564.5	protein_coding	241102253,241094277,241089980,241089041	241102320,241094432,241090044,241089365	Gene ID= ENSG00000122085.16 TPM= 1.17 Transcript Type= retained_intron
chr2	241095566	241102332	241095566	241102332	-	ENST00000391980.6@MTERF4	ENST00000391980.6	protein_coding	241102253,241099396,241097243,241095566	241102332,241099894,241097427,241096438	Gene ID= ENSG00000122085.16 TPM= 24.52 Transcript Type= protein_coding
chr2	241106099	241149504	241106099	241149504	-	ENST00000234040.8@PASK	ENST00000234040.8	protein_coding	241149414,241142837,241140521,241139885,241138654,241137953,241137004,241135871,241132874,241126196,241123949,241122732,241115288,241115043,241112240,241108167,241107353,241106099	241149504,241143074,241140753,241140055,241138794,241138087,241137264,241136039,241133030,241127451,241124133,241122899,241115413,241115177,241112439,241108300,241107499,241106723	Gene ID= ENSG00000115687.13 TPM= 4.67 Transcript Type= protein_coding
chr2	241106297	241149435	241106297	241149435	-	ENST00000358649.8@PASK	ENST00000358649.8	protein_coding	241149414,241142837,241140521,241139885,241138654,241137953,241137004,241135871,241132874,241126196,241123949,241122732,241115288,241115022,241112240,241108167,241107353,241106297	241149435,241143074,241140753,241140055,241138794,241138087,241137264,241136039,241133030,241127451,241124133,241122899,241115413,241115177,241112439,241108300,241107499,241106723	Gene ID= ENSG00000115687.13 TPM= 3.5 Transcript Type= protein_coding
chr2	241113307	241149463	241113307	241149463	-	ENST00000403638.7@PASK	ENST00000403638.7	protein_coding	241149414,241142837,241140521,241139885,241138654,241137953,241137004,241135871,241132874,241126196,241123949,241122732,241115288,241113307	241149463,241143074,241140753,241140055,241138794,241138087,241137264,241136039,241133030,241127451,241124133,241122899,241115413,241115177	Gene ID= ENSG00000115687.13 TPM= 1.17 Transcript Type= protein_coding
chr2	241113635	241134769	241113635	241134769	-	ENST00000493544.1@PASK	ENST00000493544.1	protein_coding	241132874,241126196,241123949,241122732,241115288,241113635	241134769,241127451,241124133,241122899,241115413,241115177	Gene ID= ENSG00000115687.13 TPM= 3.5 Transcript Type= retained_intron
chr2	241149078	241154202	241149078	241154202	+	transcript10165.chr2.nnic@NA	transcript10165.chr2.nnic	NA	241149078	241154202	Gene ID= novel_gene_chr2_10166 TPM= 2.34 Transcript Type= NA
chr2	241150022	241183652	241150022	241183652	+	ENST00000234038.10@PPP1R7	ENST00000234038.10	protein_coding	241150022,241153476,241157807,241158484,241159213,241160332,241163285,241166337,241169781,241182647	241150547,241153604,241157862,241158549,241159343,241160494,241163401,241166441,241169867,241183652	Gene ID= ENSG00000115685.14 TPM= 7.01 Transcript Type= protein_coding
chr2	241150480	241167174	241150480	241167174	+	ENST00000406106.7@PPP1R7	ENST00000406106.7	protein_coding	241150480,241153476,241157807,241158484,241159213,241160332,241163285,241166337,241167045	241150547,241153604,241157862,241158549,241159343,241160494,241163401,241166441,241167174	Gene ID= ENSG00000115685.14 TPM= 14.01 Transcript Type= protein_coding
chr2	241218185	241225184	241218185	241225184	+	ENST00000487192.1@ANO7	ENST00000487192.1	protein_coding	241218185,241223186	241218381,241225184	Gene ID= ENSG00000146205.13 TPM= 1.17 Transcript Type= retained_intron
chr2	241229212	241315292	241229212	241315292	-	ENST00000391976.6@HDLBP	ENST00000391976.6	protein_coding	241315102,241268477,241266794,241264448,241262711,241256600,241256184,241255374,241255051,241253393,241252957,241249841,241248244,241248003,241247056,241246752,241242460,241239901,241239602,241238649,241236615,241235490,241235121,241233820,241230759,241230153,241229833,241229212	241315292,241268541,241266906,241264605,241262926,241256806,241256399,241255580,241255158,241253497,241253035,241249980,241248348,241248116,241247142,241246883,241242678,241240122,241239820,241238787,241236769,241235594,241235255,241233963,241230944,241230269,241229961,241229687	Gene ID= ENSG00000115677.16 TPM= 295.45 Transcript Type= protein_coding
chr2	241229212	241315842	241229212	241315842	-	ENST00000310931.8@HDLBP	ENST00000310931.8	protein_coding	241315570,241268477,241266794,241264448,241262711,241256600,241256184,241255374,241255051,241253393,241252957,241249841,241248244,241248003,241247056,241246752,241242460,241239901,241239602,241238649,241236615,241235490,241235121,241233820,241230759,241230153,241229833,241229212	241315842,241268541,241266906,241264605,241262926,241256806,241256399,241255580,241255158,241253497,241253035,241249980,241248348,241248116,241247142,241246883,241242678,241240122,241239820,241238787,241236769,241235594,241235255,241233963,241230944,241230269,241229961,241229687	Gene ID= ENSG00000115677.16 TPM= 96.67 Transcript Type= protein_coding
chr2	241227264	241272886	241227264	241272886	-	ENST00000391975.5@HDLBP	ENST00000391975.5	protein_coding	241272761,241268477,241266794,241264448,241262711,241256600,241256184,241255374,241255051,241253393,241252957,241249841,241248244,241248003,241247056,241246752,241242460,241239901,241239602,241238649,241236615,241235490,241235121,241233820,241230759,241230153,241229833,241227264	241272886,241268541,241266906,241264605,241262926,241256806,241256399,241255580,241255158,241253497,241253035,241249980,241248348,241248116,241247142,241246883,241242678,241240122,241239820,241238787,241236769,241235594,241235255,241233963,241230944,241230269,241229961,241229687	Gene ID= ENSG00000115677.16 TPM= 27.73 Transcript Type= protein_coding
chr2	241315894	241354027	241315894	241354027	+	transcript10227.chr2.nic@SEPT2	transcript10227.chr2.nic	protein_coding	241315894,241316422,241317499,241324216,241325993,241335126,241335975,241337382,241337673,241342992,241343752,241346166,241348134,241350073,241351967	241315982,241316540,241317599,241324241,241326113,241335212,241336098,241337516,241337790,241343093,241343897,241346249,241348191,241350203,241354027	Gene ID= ENSG00000168385.17 TPM= 22.91 Transcript Type= NA
chr2	241315861	241354024	241315861	241354024	+	ENST00000616972.4@SEPT2	ENST00000616972.4	protein_coding	241315861,241316422,241324216,241325993,241335126,241335975,241337382,241337673,241342992,241343752,241346166,241348134,241350073,241351967	241315982,241316555,241324241,241326113,241335212,241336098,241337516,241337790,241343093,241343897,241346249,241348191,241350203,241354024	Gene ID= ENSG00000168385.17 TPM= 7.89 Transcript Type= protein_coding
chr2	241315901	241354027	241315901	241354027	+	transcript10238.chr2.nic@SEPT2	transcript10238.chr2.nic	protein_coding	241315901,241317499,241324216,241325993,241335126,241335975,241337382,241337673,241342992,241343752,241346166,241348134,241350073,241351967	241315982,241317599,241324241,241326113,241335212,241336098,241337516,241337790,241343093,241343897,241346249,241348191,241350203,241354027	Gene ID= ENSG00000168385.17 TPM= 20.57 Transcript Type= NA
chr2	241315928	241354027	241315928	241354027	+	ENST00000402092.6@SEPT2	ENST00000402092.6	protein_coding	241315928,241320203,241324216,241325993,241335126,241335975,241337382,241337673,241342992,241343752,241346166,241348134,241350073,241351967	241315982,241320287,241324241,241326113,241335212,241336098,241337516,241337790,241343093,241343897,241346249,241348191,241350203,241354027	Gene ID= ENSG00000168385.17 TPM= 5.98 Transcript Type= protein_coding
chr2	241315100	241354024	241315100	241354024	+	ENST00000391973.6@SEPT2	ENST00000391973.6	protein_coding	241315100,241324216,241325993,241335126,241335975,241337382,241337673,241342992,241343752,241346166,241348134,241350073,241351967	241315610,241324241,241326113,241335212,241336098,241337516,241337790,241343093,241343897,241346249,241348191,241350203,241354024	Gene ID= ENSG00000168385.17 TPM= 27.74 Transcript Type= protein_coding
chr2	241315854	241354027	241315854	241354027	+	transcript10247.chr2.nic@SEPT2	transcript10247.chr2.nic	protein_coding	241315854,241324216,241325993,241335126,241335975,241337382,241337673,241342992,241343752,241346166,241348134,241350073,241351943	241315982,241324241,241326113,241335212,241336098,241337516,241337790,241343093,241343897,241346249,241348191,241350203,241354027	Gene ID= ENSG00000168385.17 TPM= 19.3 Transcript Type= NA
chr2	241315883	241354027	241315883	241354027	+	ENST00000407971.5@SEPT2	ENST00000407971.5	protein_coding	241315883,241325993,241335126,241335975,241337382,241337673,241342992,241343752,241346166,241348134,241350073,241351967	241315982,241326113,241335212,241336098,241337516,241337790,241343093,241343897,241346249,241348191,241350203,241354027	Gene ID= ENSG00000168385.17 TPM= 5.15 Transcript Type= protein_coding
chr2	241315861	241354027	241315861	241354027	+	ENST00000391971.6@SEPT2	ENST00000391971.6	protein_coding	241315861,241324216,241325993,241335126,241335975,241337382,241337673,241342992,241343752,241346166,241348134,241350073,241351967	241315982,241324241,241326113,241335212,241336098,241337516,241337790,241343093,241343897,241346249,241348191,241350203,241354027	Gene ID= ENSG00000168385.17 TPM= 484.69 Transcript Type= protein_coding
chr2	241315896	241318130	241315896	241318130	+	transcript10289.chr2.nnic@NA	transcript10289.chr2.nnic	NA	241315896	241318130	Gene ID= novel_gene_chr2_10290 TPM= 10.51 Transcript Type= NA
chr2	241317537	241319245	241317537	241319245	-	transcript10291.chr2.nnic@NA	transcript10291.chr2.nnic	NA	241317537	241319245	Gene ID= novel_gene_chr2_10292 TPM= 4.67 Transcript Type= NA
chr2	241356243	241494841	241356243	241494841	+	ENST00000264042.7@FARP2	ENST00000264042.7	protein_coding	241356243,241373084,241403828,241404799,241407537,241411033,241413307,241417962,241431679,241434158,241434962,241436481,241441304,241456747,241462523,241463335,241463899,241468140,241475857,241483465,241484242,241489962,241491061,241491516,241492929,241493293,241494008	241356388,241373290,241403932,241404841,241407615,241411130,241413421,241418109,241431774,241434321,241435030,241436538,241441556,241456922,241462612,241463468,241463980,241468377,241475987,241483533,241484331,241490044,241491179,241491679,241493036,241493444,241494841	Gene ID= ENSG00000006607.13 TPM= 22.18 Transcript Type= protein_coding
chr2	241356252	241445264	241356252	241445264	+	transcript10299.chr2.nic@FARP2	transcript10299.chr2.nic	protein_coding	241356252,241373084,241403828,241404799,241407537,241411033,241413307,241417962,241431679,241434158,241434962,241436481,241441304	241356388,241373290,241403932,241404841,241407615,241411130,241413421,241418109,241431774,241434321,241435030,241436538,241445264	Gene ID= ENSG00000006607.13 TPM= 4.67 Transcript Type= NA
chr2	241492674	241508692	241492674	241508692	-	ENST00000316586.8@STK25	ENST00000316586.8	protein_coding	241508443,241508006,241501478,241500740,241500173,241499257,241498989,241498639,241498235,241497616,241496398,241492674	241508692,241508135,241501708,241500796,241500281,241499414,241499174,241498784,241498349,241497687,241496534,241495701	Gene ID= ENSG00000115694.14 TPM= 9.34 Transcript Type= protein_coding
chr2	241495017	241508688	241495017	241508688	-	ENST00000403346.7@STK25	ENST00000403346.7	protein_coding	241508505,241508006,241501478,241500740,241500173,241499257,241498989,241498639,241498235,241497616,241496398,241495017	241508688,241508135,241501708,241500796,241500281,241499414,241499174,241498784,241498349,241497687,241496534,241495701	Gene ID= ENSG00000115694.14 TPM= 24.59 Transcript Type= protein_coding
chr2	241494707	241508695	241494707	241508695	-	ENST00000535007.5@STK25	ENST00000535007.5	protein_coding	241508443,241501478,241500740,241500173,241499257,241498989,241498639,241498235,241497616,241496398,241494707	241508695,241501708,241500796,241500281,241499414,241499174,241498784,241498349,241497687,241496534,241495701	Gene ID= ENSG00000115694.14 TPM= 7.01 Transcript Type= protein_coding
chr2	241495022	241508638	241495022	241508638	-	transcript10325.chr2.nic@STK25	transcript10325.chr2.nic	protein_coding	241508443,241508006,241501478,241500740,241499257,241498989,241498639,241498235,241497616,241496398,241495022	241508638,241508135,241501708,241500796,241500281,241499174,241498784,241498349,241497687,241496534,241495701	Gene ID= ENSG00000115694.14 TPM= 15 Transcript Type= NA
chr2	241495022	241508645	241495022	241508645	-	transcript10326.chr2.nic@STK25	transcript10326.chr2.nic	protein_coding	241508505,241508006,241501478,241500740,241499257,241498989,241498639,241498235,241497616,241496398,241495022	241508645,241508135,241501708,241500796,241500281,241499174,241498784,241498349,241497687,241496534,241495701	Gene ID= ENSG00000115694.14 TPM= 10.92 Transcript Type= NA
chr2	241495022	241508612	241495022	241508612	-	transcript10336.chr2.nic@STK25	transcript10336.chr2.nic	protein_coding	241508006,241501478,241500740,241499257,241498989,241498639,241498235,241497616,241496398,241495022	241508612,241501708,241500796,241500281,241499174,241498784,241498349,241497687,241496534,241495701	Gene ID= ENSG00000115694.14 TPM= 13.25 Transcript Type= NA
chr2	241495019	241508362	241495019	241508362	-	ENST00000401869.5@STK25	ENST00000401869.5	protein_coding	241508006,241501478,241500740,241500173,241499257,241498989,241498639,241498235,241497616,241496398,241495019	241508362,241501708,241500796,241500281,241499414,241499174,241498784,241498349,241497687,241496534,241495701	Gene ID= ENSG00000115694.14 TPM= 41.08 Transcript Type= protein_coding
chr2	241495022	241508556	241495022	241508556	-	ENST00000405883.7@STK25	ENST00000405883.7	protein_coding	241508443,241508006,241500740,241500173,241499257,241498989,241498639,241498235,241497616,241496398,241495022	241508556,241508135,241500796,241500281,241499414,241499174,241498784,241498349,241497687,241496534,241495701	Gene ID= ENSG00000115694.14 TPM= 3.71 Transcript Type= protein_coding
chr2	241551306	241574138	241551306	241574138	+	transcript10360.chr2.nnic@BOK	transcript10360.chr2.nnic	protein_coding	241551306,241559455,241562348,241570125,241572297	241551477,241559703,241562476,241570288,241574138	Gene ID= ENSG00000176720.5 TPM= 8.17 Transcript Type= NA
chr2	241558750	241574138	241558750	241574138	+	transcript10364.chr2.nnic@BOK	transcript10364.chr2.nnic	protein_coding	241558750,241559455,241562348,241570125,241572297	241559088,241559703,241562476,241570288,241574138	Gene ID= ENSG00000176720.5 TPM= 7.01 Transcript Type= NA
chr2	241551394	241574138	241551394	241574138	+	transcript10366.chr2.nic@BOK	transcript10366.chr2.nic	protein_coding	241551394,241562348,241570125,241572297	241551477,241562476,241570288,241574138	Gene ID= ENSG00000176720.5 TPM= 5.84 Transcript Type= NA
chr2	241558975	241574138	241558975	241574138	+	transcript10370.chr2.nic@BOK	transcript10370.chr2.nic	protein_coding	241558975,241562348,241570125,241572297	241559703,241562476,241570288,241574138	Gene ID= ENSG00000176720.5 TPM= 18.68 Transcript Type= NA
chr2	241572366	241574119	241572366	241574119	+	transcript10371.chr2.nnic@BOK	transcript10371.chr2.nnic	protein_coding	241572366,241573177	241573095,241574119	Gene ID= ENSG00000176720.5 TPM= 8.17 Transcript Type= NA
chr2	241558721	241574138	241558721	241574138	+	ENST00000318407.4@BOK	ENST00000318407.4	protein_coding	241558721,241559455,241562348,241570125,241572297	241558993,241559703,241562476,241570288,241574138	Gene ID= ENSG00000176720.5 TPM= 198.49 Transcript Type= protein_coding
chr2	241579050	241579271	241579050	241579271	+	transcript10372.chr2.nnic@NA	transcript10372.chr2.nnic	NA	241579050	241579271	Gene ID= novel_gene_chr2_10373 TPM= 4.67 Transcript Type= NA
chr2	241584405	241617501	241584405	241617501	-	ENST00000402136.5@THAP4	ENST00000402136.5	protein_coding	241617412,241606314,241602970,241601896,241584405	241617501,241606473,241603079,241601999,241584725	Gene ID= ENSG00000176946.11 TPM= 8.17 Transcript Type= protein_coding
chr2	241637630	241673857	241637630	241673857	+	transcript10384.chr2.nic@ATG4B	transcript10384.chr2.nic	protein_coding	241637630,241651010,241651264,241653307,241653512,241654546,241655271,241659108,241666645,241668143,241668540,241670726,241671312,241672191	241637724,241651111,241651335,241653369,241653610,241654647,241655343,241659187,241666838,241668221,241668685,241670782,241671405,241673857	Gene ID= ENSG00000168397.16 TPM= 11.29 Transcript Type= NA
chr2	241637612	241673857	241637612	241673857	+	ENST00000404914.7@ATG4B	ENST00000404914.7	protein_coding	241637612,241651010,241651264,241653512,241654546,241655271,241659108,241666645,241668143,241668540,241670726,241671312,241672191	241637724,241651111,241651335,241653610,241654647,241655343,241659187,241666838,241668221,241668685,241670782,241671405,241673857	Gene ID= ENSG00000168397.16 TPM= 52.16 Transcript Type= protein_coding
chr2	241637213	241673854	241637213	241673854	+	ENST00000405546.7@ATG4B	ENST00000405546.7	protein_coding	241637213,241651010,241651264,241653512,241654546,241655271,241659108,241666645,241668143,241668540,241670726,241671312,241672191	241637724,241651111,241651335,241653610,241654647,241655343,241659187,241666838,241668221,241668685,241670782,241671425,241673854	Gene ID= ENSG00000168397.16 TPM= 3.7 Transcript Type= protein_coding
chr2	241637630	241673857	241637630	241673857	+	transcript10394.chr2.nic@ATG4B	transcript10394.chr2.nic	protein_coding	241637630,241651010,241651264,241653512,241654546,241655271,241659108,241666645,241668143,241668540,241670726,241671312	241637724,241651111,241651335,241653610,241654647,241655343,241659187,241666838,241668221,241668685,241670782,241673857	Gene ID= ENSG00000168397.16 TPM= 13.04 Transcript Type= NA
chr2	241657291	241673857	241657291	241673857	+	transcript10398.chr2.nic@ATG4B	transcript10398.chr2.nic	protein_coding	241657291,241666645,241668143,241668540,241670726,241671312,241672191	241659187,241666838,241668221,241668685,241670782,241671405,241673857	Gene ID= ENSG00000168397.16 TPM= 7.01 Transcript Type= NA
chr2	241637698	241672631	241637698	241672631	+	ENST00000482507.5@ATG4B	ENST00000482507.5	protein_coding	241637698,241651010,241651264,241653307,241653512,241654546,241655271,241659108,241666645,241668143,241668540,241670726,241671312	241637724,241651111,241651335,241653369,241653610,241654647,241655343,241659187,241666838,241668221,241668685,241670782,241672631	Gene ID= ENSG00000168397.16 TPM= 10.71 Transcript Type= retained_intron
chr2	241675742	241686991	241675742	241686991	-	ENST00000305784.6@DTYMK	ENST00000305784.6	protein_coding	241686654,241685769,241680229,241678452,241675742	241686991,241685877,241680319,241678649,241676237	Gene ID= ENSG00000168393.12 TPM= 20.43 Transcript Type= protein_coding
chr2	241675747	241686944	241675747	241686944	-	ENST00000400770.6@DTYMK	ENST00000400770.6	protein_coding	241686654,241685769,241678452,241675747	241686944,241685877,241678649,241676237	Gene ID= ENSG00000168393.12 TPM= 8.76 Transcript Type= nonsense_mediated_decay
chr2	241702012	241729475	241702012	241729475	+	transcript10405.chr2.nic@ING5	transcript10405.chr2.nic	protein_coding	241702012,241704653,241709216,241711377,241711978,241722939,241723210,241724989,241727743,241728500	241702102,241704724,241709382,241711488,241712071,241723074,241723271,241726783,241727945,241729475	Gene ID= ENSG00000168395.15 TPM= 2.34 Transcript Type= NA
chr2	241702042	241721715	241702042	241721715	+	ENST00000482774.5@ING5	ENST00000482774.5	protein_coding	241702042,241704653,241709216,241711377,241711978,241719483,241719976	241702102,241704724,241709382,241711488,241712071,241719612,241721715	Gene ID= ENSG00000168395.15 TPM= 1.17 Transcript Type= processed_transcript
chr2	241702040	241729478	241702040	241729478	+	ENST00000313552.10@ING5	ENST00000313552.10	protein_coding	241702040,241704653,241709216,241711377,241711978,241722939,241723210,241724989	241702102,241704724,241709382,241711488,241712071,241723074,241723271,241729478	Gene ID= ENSG00000168395.15 TPM= 16.35 Transcript Type= protein_coding
chr2	241734616	241768811	241734616	241768811	+	transcript10427.chr2.nic@D2HGDH	transcript10427.chr2.nic	protein_coding	241734616,241735133,241741033,241742435,241743622,241744709,241748865,241750151,241751246,241755849,241767710	241734695,241735516,241741090,241742574,241743815,241744877,241748942,241750294,241751388,241756014,241768811	Gene ID= ENSG00000180902.17 TPM= 12.06 Transcript Type= NA
chr2	241734616	241768811	241734616	241768811	+	transcript10428.chr2.nic@D2HGDH	transcript10428.chr2.nic	protein_coding	241734616,241735133,241741033,241742435,241743622,241744709,241748865,241750151,241751246,241755849,241767710	241734695,241735516,241741090,241742574,241743815,241744877,241749399,241750294,241751388,241756014,241768811	Gene ID= ENSG00000180902.17 TPM= 2.72 Transcript Type= NA
chr2	241734579	241768811	241734579	241768811	+	ENST00000321264.8@D2HGDH	ENST00000321264.8	protein_coding	241734579,241735133,241741033,241742435,241743622,241744709,241750151,241751246,241755849,241767710	241734695,241735516,241741090,241742574,241743815,241744877,241750294,241751388,241756014,241768811	Gene ID= ENSG00000180902.17 TPM= 19.07 Transcript Type= protein_coding
chr2	241734836	241768811	241734836	241768811	+	transcript10441.chr2.nnic@D2HGDH	transcript10441.chr2.nnic	protein_coding	241734836,241741033,241767710	241735516,241741090,241768811	Gene ID= ENSG00000180902.17 TPM= 10.51 Transcript Type= NA
chr2	241734615	241768811	241734615	241768811	+	ENST00000436747.5@D2HGDH	ENST00000436747.5	protein_coding	241734615,241735133,241741033,241742435,241743639,241744709,241748865,241750151,241751246,241754631,241755045,241767710	241734695,241735516,241741090,241742574,241743815,241744877,241749929,241750294,241751388,241754746,241756014,241768811	Gene ID= ENSG00000180902.17 TPM= 14.01 Transcript Type= nonsense_mediated_decay
chr2	241734630	241768809	241734630	241768809	+	ENST00000400769.6@D2HGDH	ENST00000400769.6	protein_coding	241734630,241735133,241741033,241742435,241743622,241744709,241755849,241767710	241734695,241735516,241741090,241742574,241743815,241744877,241756014,241768809	Gene ID= ENSG00000180902.17 TPM= 11.68 Transcript Type= nonsense_mediated_decay
chr2	241849881	241858908	241849881	241858908	-	ENST00000334409.9@PDCD1	ENST00000334409.9	protein_coding	241858763,241852621,241852198,241851949,241849881	241858908,241852980,241852353,241851983,241851297	Gene ID= ENSG00000188389.10 TPM= 3.5 Transcript Type= protein_coding
chr2	241889828	241891325	241889828	241891325	+	transcript10445.chr2.nnic@NA	transcript10445.chr2.nnic	NA	241889828	241891325	Gene ID= novel_gene_chr2_10446 TPM= 2.34 Transcript Type= NA
chr2	242088659	242172737	242088659	242172737	+	transcript10448.chr2.nnic@LINC01881	transcript10448.chr2.nnic	transcribed_unprocessed_pseudogene	242088659,242094887,242114639,242116183,242118965,242122287,242138784,242159349,242159960,242167045	242088801,242095027,242114741,242116232,242119057,242122455,242138888,242159498,242160865,242172737	Gene ID= ENSG00000220804.8 TPM= 2.34 Transcript Type= NA
chr3	196730	409417	196730	409417	+	transcript3.chr3.nic@CHL1	transcript3.chr3.nic	protein_coding	196730,244613,319683,325959,328167,340794,341912,342984,344589,349359,354640,360284,361699,363217,365950,377818,382179,382474,383816,389252,390701,390955,391675,394693,399017,401626,405495	197063,244692,319867,326064,328354,340916,342082,343031,344709,349543,354771,360424,361810,363383,366115,377942,382280,382671,383886,389474,390816,391159,391797,394872,399148,401698,409417	Gene ID= ENSG00000134121.9 TPM= 4.67 Transcript Type= NA
chr3	196751	409417	196751	409417	+	transcript5.chr3.nic@CHL1	transcript5.chr3.nic	protein_coding	196751,319683,325959,328167,340794,341912,342984,344589,349359,354640,360284,361699,363217,365950,377818,382179,382474,383816,389252,390701,390955,391675,394693,399017,401626,405495	197063,319867,326064,328354,340916,342082,343031,344709,349543,354771,360424,361810,363383,366115,377942,382280,382671,383886,389474,390816,391159,391797,394872,399148,401698,409417	Gene ID= ENSG00000134121.9 TPM= 4.67 Transcript Type= NA
chr3	1092576	1404217	1092576	1404217	+	ENST00000446702.6@CNTN6	ENST00000446702.6	protein_coding	1092576,1147927,1220687,1227818,1278413,1295601,1297889,1321650,1325815,1327457,1329785,1352324,1372299,1372838,1373604,1373924,1377005,1382942,1383293,1385611,1401433,1402318,1403318	1093120,1148063,1220813,1227993,1278508,1295804,1297991,1321834,1325951,1327586,1329935,1352451,1372474,1372955,1373762,1374073,1377075,1383176,1383408,1385797,1401545,1402486,1404217	Gene ID= ENSG00000134115.12 TPM= 4.67 Transcript Type= protein_coding
chr3	2571341	3057956	2571341	3057956	+	ENST00000427331.5@CNTN4	ENST00000427331.5	protein_coding	2571341,2736215,2745522,2819486,2866752,2883145,2887040,2900685,2902876,2925629,2988345,3026102,3030855,3034632,3037179,3038933,3040037,3042310,3042977,3043592,3053807,3056120	2571558,2736341,2745697,2819581,2866949,2883247,2887224,2900821,2903005,2925779,2988472,3026277,3030975,3034790,3037328,3039003,3040271,3042422,3043163,3043704,3053975,3057956	Gene ID= ENSG00000144619.14 TPM= 4.67 Transcript Type= protein_coding
chr3	2511350	2989013	2511350	2989013	+	ENST00000438282.6@CNTN4	ENST00000438282.6	protein_coding	2511350,2571416,2736215,2745522,2819486,2866752,2883145,2887040,2900685,2902876,2925629,2988345	2511697,2571558,2736341,2745697,2819581,2866949,2883247,2887224,2900821,2903005,2925779,2989013	Gene ID= ENSG00000144619.14 TPM= 1.17 Transcript Type= retained_intron
chr3	3126916	3149023	3126916	3149023	+	ENST00000251607.10@TRNT1	ENST00000251607.10	protein_coding	3126916,3129014,3137260,3140510,3144584,3146430,3147450,3147906	3126990,3129188,3137453,3140648,3144710,3146623,3147703,3149023	Gene ID= ENSG00000072756.16 TPM= 14.01 Transcript Type= protein_coding
chr3	3126951	3130679	3126951	3130679	+	ENST00000339437.10@TRNT1	ENST00000339437.10	protein_coding	3126951,3129014,3129919	3126990,3129188,3130679	Gene ID= ENSG00000072756.16 TPM= 1.17 Transcript Type= protein_coding
chr3	3150011	3179710	3150011	3179710	-	ENST00000231948.8@CRBN	ENST00000231948.8	protein_coding	3179621,3175163,3174059,3172776,3167634,3156219,3154747,3153960,3153424,3152456,3150011	3179710,3175269,3174261,3172925,3167793,3156281,3154831,3154075,3153488,3152587,3151045	Gene ID= ENSG00000113851.14 TPM= 37.36 Transcript Type= protein_coding
chr3	3150011	3179705	3150011	3179705	-	transcript34.chr3.nic@CRBN	transcript34.chr3.nic	protein_coding	3179621,3174059,3172776,3167634,3156219,3154747,3153960,3153424,3152456,3150011	3179705,3174261,3172925,3167793,3156281,3154831,3154075,3153488,3152587,3151045	Gene ID= ENSG00000113851.14 TPM= 4.67 Transcript Type= NA
chr3	3150860	3179708	3150860	3179708	-	transcript39.chr3.nic@CRBN	transcript39.chr3.nic	protein_coding	3179621,3175163,3174059,3172776,3167634,3156219,3153960,3153424,3152456,3150860	3179708,3175269,3174261,3172925,3167793,3156281,3154831,3153488,3152587,3151045	Gene ID= ENSG00000113851.14 TPM= 2.34 Transcript Type= NA
chr3	3150011	3179710	3150011	3179710	-	ENST00000432408.6@CRBN	ENST00000432408.6	protein_coding	3179621,3175163,3174059,3172776,3167634,3156219,3154747,3153960,3153424,3152456,3150011	3179710,3175266,3174261,3172925,3167793,3156281,3154831,3154075,3153488,3152587,3151045	Gene ID= ENSG00000113851.14 TPM= 2.34 Transcript Type= protein_coding
chr3	3172176	3179701	3172176	3179701	-	ENST00000498700.5@CRBN	ENST00000498700.5	protein_coding	3179621,3175163,3174059,3172776,3172176	3179701,3175269,3174261,3172925,3172646	Gene ID= ENSG00000113851.14 TPM= 3.5 Transcript Type= retained_intron
chr3	4303304	4317567	4303304	4317567	+	ENST00000358065.4@SETMAR	ENST00000358065.4	protein_coding	4303304,4312898,4316212	4303526,4313761,4317567	Gene ID= ENSG00000170364.12 TPM= 1.17 Transcript Type= protein_coding
chr3	4317446	4320647	4317446	4320647	+	transcript70.chr3.nnic@NA	transcript70.chr3.nnic	NA	4317446	4320647	Gene ID= novel_gene_chr3_71 TPM= 3.5 Transcript Type= NA
chr3	4361146	4467281	4361146	4467281	-	ENST00000272902.9@SUMF1	ENST00000272902.9	protein_coding	4466976,4452876,4449266,4420064,4418010,4417128,4410865,4376330,4361146	4467281,4453049,4449340,4420146,4418132,4417242,4410978,4376389,4362254	Gene ID= ENSG00000144455.13 TPM= 130.77 Transcript Type= protein_coding
chr3	4814670	4847506	4814670	4847506	+	transcript81.chr3.nic@ITPR1	transcript81.chr3.nic	protein_coding	4814670,4818082,4836774,4846139	4815218,4818242,4836935,4847506	Gene ID= ENSG00000150995.18 TPM= 15.18 Transcript Type= NA
chr3	4979116	4985323	4979116	4985323	+	ENST00000256495.3@BHLHE40	ENST00000256495.3	protein_coding	4979116,4979962,4980301,4981392,4982836	4979798,4980031,4980408,4981515,4985323	Gene ID= ENSG00000134107.4 TPM= 17.51 Transcript Type= protein_coding
chr3	4979448	4984936	4979448	4984936	+	transcript87.chr3.nic@BHLHE40	transcript87.chr3.nic	protein_coding	4979448,4979962,4980301,4981392	4979798,4980031,4980408,4984936	Gene ID= ENSG00000134107.4 TPM= 4.67 Transcript Type= NA
chr3	5122220	5180911	5122220	5180911	+	ENST00000256496.7@ARL8B	ENST00000256496.7	protein_coding	5122220,5170503,5172150,5172647,5174017,5174344,5178664	5122588,5170583,5172223,5172740,5174084,5174414,5180911	Gene ID= ENSG00000134108.12 TPM= 88.74 Transcript Type= protein_coding
chr3	5122245	5180912	5122245	5180912	+	ENST00000611208.4@ARL8B	ENST00000611208.4	protein_coding	5122245,5170503,5172150,5172647,5174017,5174344,5178664	5122588,5170583,5172223,5172740,5174084,5174414,5180912	Gene ID= ENSG00000134108.12 TPM= 99.25 Transcript Type= protein_coding
chr3	5122292	5179646	5122292	5179646	+	ENST00000455168.5@ARL8B	ENST00000455168.5	protein_coding	5122292,5170503,5172150,5172647,5174017,5174344,5178664	5122588,5170556,5172223,5172740,5174084,5174414,5179646	Gene ID= ENSG00000134108.12 TPM= 4.67 Transcript Type= nonsense_mediated_decay
chr3	5187673	5219957	5187673	5219957	+	ENST00000256497.8@EDEM1	ENST00000256497.8	protein_coding	5187673,5195209,5199592,5201753,5202966,5205067,5207153,5208093,5210175,5211120,5213319,5215829	5188314,5195281,5199695,5201924,5203149,5205241,5207273,5208263,5210248,5211216,5213522,5219957	Gene ID= ENSG00000134109.10 TPM= 110.92 Transcript Type= protein_coding
chr3	8501823	8568125	8501823	8568125	+	transcript113.chr3.nic@LMCD1	transcript113.chr3.nic	protein_coding	8501823,8514925,8532737,8537185,8548568,8565432,8567440	8501980,8514995,8532825,8537440,8548903,8565647,8568125	Gene ID= ENSG00000071282.11 TPM= 28.02 Transcript Type= NA
chr3	8750408	8769617	8750408	8769617	-	ENST00000316793.7@OXTR	ENST00000316793.7	protein_coding	8769231,8768496,8767266,8750408	8769617,8768591,8768329,8753224	Gene ID= ENSG00000180914.10 TPM= 1.17 Transcript Type= protein_coding
chr3	8877196	8878619	8877196	8878619	-	transcript119.chr3.nnic@NA	transcript119.chr3.nnic	NA	8877196	8878619	Gene ID= novel_gene_chr3_120 TPM= 2.34 Transcript Type= NA
chr3	8877076	8963502	8877076	8963502	-	ENST00000264926.6@RAD18	ENST00000264926.6	protein_coding	8963335,8958920,8948509,8947220,8941467,8939554,8935871,8913644,8912312,8902380,8898894,8890389,8877076	8963502,8959001,8948570,8947290,8941804,8939653,8936055,8913720,8912372,8902520,8899047,8890451,8881459	Gene ID= ENSG00000070950.9 TPM= 3.5 Transcript Type= protein_coding
chr3	8879892	8963489	8879892	8963489	-	transcript123.chr3.nic@RAD18	transcript123.chr3.nic	protein_coding	8963335,8948509,8947220,8941467,8939554,8935871,8913644,8912312,8902380,8898894,8890389,8879892	8963489,8948570,8947290,8941804,8939653,8936055,8913720,8912372,8902520,8899047,8890451,8881459	Gene ID= ENSG00000070950.9 TPM= 7.59 Transcript Type= NA
chr3	9363042	9385702	9363042	9385702	+	transcript128.chr3.nic@THUMPD3	transcript128.chr3.nic	protein_coding	9363042,9365016,9366908,9371060,9374516,9377819,9380503,9383199,9384212,9384524	9363525,9365320,9366985,9371536,9374646,9377888,9380618,9383309,9384335,9385702	Gene ID= ENSG00000134077.15 TPM= 8.17 Transcript Type= NA
chr3	9362842	9385702	9362842	9385702	+	ENST00000452837.6@THUMPD3	ENST00000452837.6	protein_coding	9362842,9365016,9366908,9371060,9374516,9377819,9380503,9383199,9384212,9384524	9363127,9365320,9366985,9371536,9374646,9377888,9380618,9383309,9384335,9385702	Gene ID= ENSG00000134077.15 TPM= 14.01 Transcript Type= protein_coding
chr3	9363052	9386791	9363052	9386791	+	ENST00000345094.7@THUMPD3	ENST00000345094.7	protein_coding	9363052,9365016,9366908,9371060,9374516,9377819,9380503,9383199,9384212,9384524	9363332,9365320,9366985,9371536,9374646,9377888,9380618,9383309,9384335,9386791	Gene ID= ENSG00000134077.15 TPM= 3.5 Transcript Type= protein_coding
chr3	9363098	9384870	9363098	9384870	+	ENST00000515662.6@THUMPD3	ENST00000515662.6	protein_coding	9363098,9365016,9366908,9371060,9374516,9377819,9380503,9383199,9384212,9384524	9363728,9365320,9366985,9371536,9374646,9377888,9380618,9383309,9384335,9384870	Gene ID= ENSG00000134077.15 TPM= 1.17 Transcript Type= protein_coding
chr3	9391274	9397286	9391274	9397286	-	transcript154.chr3.nnic@NA	transcript154.chr3.nnic	NA	9391274	9397286	Gene ID= novel_gene_chr3_155 TPM= 3.5 Transcript Type= NA
chr3	9649462	9702392	9649462	9702392	+	ENST00000296003.8@MTMR14	ENST00000296003.8	protein_coding	9649462,9653621,9662267,9668719,9669432,9671048,9672685,9677317,9677984,9683178,9684585,9684888,9685211,9687821,9688696,9688944,9689964,9697711,9701790	9649742,9653769,9662375,9668794,9669492,9671170,9672758,9677387,9678058,9683244,9684670,9684964,9685247,9687891,9688754,9689082,9690143,9697866,9702392	Gene ID= ENSG00000163719.19 TPM= 50.79 Transcript Type= protein_coding
chr3	9649433	9702393	9649433	9702393	+	ENST00000353332.9@MTMR14	ENST00000353332.9	protein_coding	9649433,9653621,9662267,9668719,9669432,9671048,9672685,9677317,9677984,9683178,9684585,9684888,9685211,9687821,9688696,9688944,9689964,9701790	9649742,9653769,9662375,9668794,9669492,9671170,9672758,9677387,9678058,9683244,9684670,9684964,9685247,9687891,9688754,9689082,9690143,9702393	Gene ID= ENSG00000163719.19 TPM= 33.28 Transcript Type= protein_coding
chr3	9649446	9702392	9649446	9702392	+	transcript169.chr3.nic@MTMR14	transcript169.chr3.nic	protein_coding	9649446,9653621,9662267,9668719,9669432,9671048,9672685,9677317,9677984,9683178,9684585,9684888,9685211,9687821,9688696,9688944,9697711,9701790	9649742,9653769,9662375,9668794,9669492,9671170,9672758,9677387,9678058,9683244,9684670,9684964,9685247,9687891,9688754,9689082,9697866,9702392	Gene ID= ENSG00000163719.19 TPM= 3.5 Transcript Type= NA
chr3	9649497	9702392	9649497	9702392	+	transcript171.chr3.nnic@MTMR14	transcript171.chr3.nnic	protein_coding	9649497,9653621,9662267,9668719,9669432,9671048,9672685,9677317,9683178,9684585,9684888,9685211,9687821,9688696,9688944,9689964,9697711,9701790	9649742,9653769,9662375,9668794,9669492,9671170,9672758,9677387,9683244,9684670,9684964,9685247,9687891,9688754,9689082,9690143,9697866,9702392	Gene ID= ENSG00000163719.19 TPM= 3.5 Transcript Type= NA
chr3	9649512	9702389	9649512	9702389	+	ENST00000351233.9@MTMR14	ENST00000351233.9	protein_coding	9649512,9653621,9662267,9668719,9669432,9671048,9672685,9677317,9677984,9683178,9684585,9684888,9685211,9687821,9688696,9688944,9701790	9649742,9653769,9662375,9668794,9669492,9671170,9672758,9677387,9678058,9683244,9684670,9684964,9685247,9687891,9688754,9689082,9702389	Gene ID= ENSG00000163719.19 TPM= 24.52 Transcript Type= protein_coding
chr3	9659446	9662381	9659446	9662381	-	transcript190.chr3.nnic@NA	transcript190.chr3.nnic	NA	9659446	9662381	Gene ID= novel_gene_chr3_191 TPM= 2.34 Transcript Type= NA
chr3	9731717	9748001	9731717	9748001	+	transcript193.chr3.nic@BRPF1	transcript193.chr3.nic	protein_coding	9731717,9734131,9738999,9740779,9741308,9742025,9742944,9743578,9744224,9745008,9745573,9745812,9746300,9747166	9732138,9734739,9739958,9740941,9741439,9742153,9743253,9743901,9744508,9745155,9745709,9745930,9746454,9748001	Gene ID= ENSG00000156983.15 TPM= 8.47 Transcript Type= NA
chr3	9731717	9748001	9731717	9748001	+	transcript204.chr3.nic@BRPF1	transcript204.chr3.nic	protein_coding	9731717,9734131,9738999,9740779,9741308,9742025,9742944,9743581,9745008,9745573,9745812,9746300,9747166	9732138,9734739,9739958,9740941,9741439,9742153,9743253,9743901,9745155,9745709,9745930,9746454,9748001	Gene ID= ENSG00000156983.15 TPM= 2.83 Transcript Type= NA
chr3	9731745	9748015	9731745	9748015	+	ENST00000424362.5@BRPF1	ENST00000424362.5	protein_coding	9731745,9734131,9738999,9740779,9741308,9742025,9742944,9743581,9744224,9745008,9745573,9745812,9746300,9747166	9732138,9734739,9739958,9740941,9741439,9742153,9743253,9743901,9744508,9745155,9745709,9745930,9746454,9748015	Gene ID= ENSG00000156983.15 TPM= 14.01 Transcript Type= protein_coding
chr3	9731729	9747873	9731729	9747873	+	ENST00000433861.6@BRPF1	ENST00000433861.6	protein_coding	9731729,9734131,9738999,9740779,9741308,9742025,9742944,9743578,9745008,9745573,9745812,9746300,9747166	9732138,9734739,9739958,9740941,9741439,9742153,9743253,9743901,9745155,9745709,9745930,9746454,9747873	Gene ID= ENSG00000156983.15 TPM= 5.84 Transcript Type= protein_coding
chr3	9731745	9748018	9731745	9748018	+	ENST00000383829.6@BRPF1	ENST00000383829.6	protein_coding	9731745,9734131,9738999,9740779,9741308,9742025,9742944,9743578,9744224,9745008,9745573,9745812,9746300,9747166	9732138,9734739,9739958,9740941,9741439,9742171,9743253,9743901,9744508,9745155,9745709,9745930,9746454,9748018	Gene ID= ENSG00000156983.15 TPM= 4.09 Transcript Type= protein_coding
chr3	9749944	9757513	9749944	9757513	+	ENST00000344629.11@OGG1	ENST00000344629.11	protein_coding	9749944,9750945,9751770,9754704,9756471,9756767,9757061	9750423,9751192,9751949,9754885,9756621,9756816,9757513	Gene ID= ENSG00000114026.21 TPM= 7.01 Transcript Type= protein_coding
chr3	9749944	9766737	9749944	9766737	+	ENST00000302036.11@OGG1	ENST00000302036.11	protein_coding	9749944,9750945,9751770,9754704,9756471,9756767,9765809	9750423,9751192,9751949,9754885,9756621,9756816,9766737	Gene ID= ENSG00000114026.21 TPM= 10.51 Transcript Type= protein_coding
chr3	9749981	9757377	9749981	9757377	+	ENST00000339511.9@OGG1	ENST00000339511.9	protein_coding	9749981,9750945,9751770,9754704,9756471,9756767	9750423,9751192,9751949,9754885,9756621,9757377	Gene ID= ENSG00000114026.21 TPM= 4.67 Transcript Type= protein_coding
chr3	9749944	9757407	9749944	9757407	+	ENST00000302003.11@OGG1	ENST00000302003.11	protein_coding	9749944,9750945,9751770,9754704,9756471,9756767,9757044	9750423,9751192,9751949,9754885,9756621,9756816,9757407	Gene ID= ENSG00000114026.21 TPM= 8.17 Transcript Type= protein_coding
chr3	9757342	9769980	9757342	9769980	-	transcript217.chr3.nic@CAMK1	transcript217.chr3.nic	protein_coding	9769832,9767667,9766125,9765759,9763139,9762914,9761631,9761461,9760656,9759672,9759488,9757729,9757342	9769980,9767781,9766213,9765890,9763213,9763052,9761757,9761536,9760768,9759750,9759575,9757846,9757621	Gene ID= ENSG00000134072.10 TPM= 8.85 Transcript Type= NA
chr3	9757342	9769977	9757342	9769977	-	ENST00000256460.7@CAMK1	ENST00000256460.7	protein_coding	9769832,9767667,9765759,9763139,9762914,9761631,9761461,9760656,9759672,9759488,9757729,9757342	9769977,9767781,9765890,9763213,9763052,9761757,9761536,9760768,9759750,9759575,9757846,9757621	Gene ID= ENSG00000134072.10 TPM= 56.72 Transcript Type= protein_coding
chr3	9757342	9769980	9757342	9769980	-	transcript223.chr3.nic@CAMK1	transcript223.chr3.nic	protein_coding	9769832,9767667,9763139,9762914,9761631,9761461,9760656,9759672,9759488,9757729,9757342	9769980,9767781,9763213,9763052,9761757,9761536,9760768,9759750,9759575,9757846,9757621	Gene ID= ENSG00000134072.10 TPM= 11.19 Transcript Type= NA
chr3	9757347	9769980	9757347	9769980	-	transcript227.chr3.nic@CAMK1	transcript227.chr3.nic	protein_coding	9769832,9767667,9763139,9762914,9761631,9761461,9760656,9759672,9759488,9757347	9769980,9767781,9763213,9763052,9761757,9761536,9760768,9759750,9759575,9757846	Gene ID= ENSG00000134072.10 TPM= 3.79 Transcript Type= NA
chr3	9779860	9792747	9779860	9792747	-	ENST00000301964.6@TADA3	ENST00000301964.6	protein_coding	9792216,9791260,9789713,9789509,9787199,9787006,9785316,9784028,9779860	9792747,9791493,9789963,9789614,9787340,9787109,9785425,9784213,9780549	Gene ID= ENSG00000171148.13 TPM= 9.34 Transcript Type= protein_coding
chr3	9793097	9807098	9793097	9807098	+	transcript269.chr3.nic@ARPC4-TTLL3	transcript269.chr3.nic	protein_coding	9793097,9797659,9800185,9803843,9806210	9793124,9797777,9800296,9804013,9807098	Gene ID= ENSG00000250151.9 TPM= 33.86 Transcript Type= NA
chr3	9837849	9844028	9837849	9844028	-	transcript254.chr3.nic@RPUSD3	transcript254.chr3.nic	protein_coding	9843890,9843465,9842199,9841983,9840698,9840532,9839032,9837849	9844028,9843601,9842243,9842082,9840805,9840616,9840307,9838207	Gene ID= ENSG00000156990.14 TPM= 5.84 Transcript Type= NA
chr3	9837849	9844028	9837849	9844028	-	transcript255.chr3.nic@RPUSD3	transcript255.chr3.nic	protein_coding	9843890,9843465,9842199,9841983,9840698,9840532,9840184,9837849	9844028,9843601,9842243,9842082,9840805,9840616,9840307,9838207	Gene ID= ENSG00000156990.14 TPM= 2.34 Transcript Type= NA
chr3	9841257	9844059	9841257	9844059	-	ENST00000433972.1@RPUSD3	ENST00000433972.1	protein_coding	9843890,9843465,9842199,9841257	9844059,9843601,9842243,9842082	Gene ID= ENSG00000156990.14 TPM= 18.68 Transcript Type= protein_coding
chr3	9837849	9844016	9837849	9844016	-	ENST00000383820.9@RPUSD3	ENST00000383820.9	protein_coding	9843890,9843465,9842199,9841983,9840698,9840532,9840184,9839032,9837849	9844016,9843601,9842243,9842082,9840805,9840616,9840307,9839171,9838207	Gene ID= ENSG00000156990.14 TPM= 52.54 Transcript Type= protein_coding
chr3	9839941	9844002	9839941	9844002	-	ENST00000418713.5@RPUSD3	ENST00000418713.5	protein_coding	9843890,9843465,9842199,9841983,9840698,9840532,9839941	9844002,9843601,9842243,9842082,9840805,9840616,9840307	Gene ID= ENSG00000156990.14 TPM= 2.34 Transcript Type= protein_coding
chr3	9890554	9894349	9890554	9894349	+	ENST00000307768.4@JAGN1	ENST00000307768.4	protein_coding	9890554,9892915	9890811,9894349	Gene ID= ENSG00000171135.13 TPM= 56.04 Transcript Type= protein_coding
chr3	9917074	9933617	9917074	9933617	+	ENST00000383812.8@IL17RC	ENST00000383812.8	protein_coding	9917074,9917713,9917923,9918335,9918500,9920491,9923881,9924232,9928166,9928305,9928580,9929852,9930028,9930400,9930895,9932608,9932820,9932953	9917420,9917734,9918075,9918409,9918609,9920602,9924020,9924291,9928220,9928486,9928630,9929897,9930149,9930459,9930943,9932703,9932858,9933617	Gene ID= ENSG00000163702.18 TPM= 14.89 Transcript Type= protein_coding
chr3	9917084	9933620	9917084	9933620	+	transcript291.chr3.nic@IL17RC	transcript291.chr3.nic	protein_coding	9917084,9917713,9917923,9918335,9918500,9920491,9923881,9924232,9928166,9928305,9928580,9929852,9930028,9930400,9930895,9932608,9932953	9917420,9917734,9918075,9918409,9918609,9920602,9924020,9924291,9928220,9928486,9928630,9929897,9930149,9930459,9930943,9932703,9933620	Gene ID= ENSG00000163702.18 TPM= 6.13 Transcript Type= NA
chr3	9917119	9933621	9917119	9933621	+	ENST00000403601.7@IL17RC	ENST00000403601.7	protein_coding	9917119,9917713,9917923,9918335,9918500,9920491,9920925,9923881,9924232,9928166,9928305,9928580,9929852,9930028,9930400,9930895,9932608,9932820,9932953	9917420,9917734,9918075,9918409,9918609,9920602,9920969,9924020,9924291,9928220,9928486,9928630,9929897,9930149,9930459,9930943,9932703,9932858,9933621	Gene ID= ENSG00000163702.18 TPM= 5.55 Transcript Type= protein_coding
chr3	9917098	9933593	9917098	9933593	+	ENST00000466046.5@IL17RC	ENST00000466046.5	protein_coding	9917098,9917713,9917923,9918335,9918500,9920491,9923881,9928166,9928305,9928580,9929852,9930028,9930400,9930895,9932608,9932820,9932953	9917420,9917734,9918075,9918409,9918609,9920602,9924291,9928220,9928486,9928630,9929897,9930149,9930459,9930943,9932703,9932858,9933593	Gene ID= ENSG00000163702.18 TPM= 1.17 Transcript Type= retained_intron
chr3	9931491	9933661	9931491	9933661	-	transcript339.chr3.nnic@NA	transcript339.chr3.nnic	NA	9931491	9933661	Gene ID= novel_gene_chr3_340 TPM= 11.97 Transcript Type= NA
chr3	9933814	9945014	9933814	9945014	+	transcript323.chr3.nic@CRELD1	transcript323.chr3.nic	protein_coding	9933814,9934420,9934835,9940850,9941111,9942813,9943077,9943381,9944365	9933920,9934612,9934917,9941026,9941206,9942896,9943172,9943515,9945014	Gene ID= ENSG00000163703.17 TPM= 3.5 Transcript Type= NA
chr3	9933570	9945032	9933570	9945032	+	transcript326.chr3.nic@CRELD1	transcript326.chr3.nic	protein_coding	9933570,9934835,9937562,9938015,9940850,9941111,9942813,9943077	9934612,9934917,9937672,9938106,9941026,9941206,9942896,9945032	Gene ID= ENSG00000163703.17 TPM= 5.84 Transcript Type= NA
chr3	9933822	9944994	9933822	9944994	+	ENST00000397170.7@CRELD1	ENST00000397170.7	protein_coding	9933822,9934420,9934835,9937562,9938015,9940850,9941111,9942813,9943077,9943381,9944365	9933852,9934612,9934917,9937672,9938106,9941026,9941206,9942896,9943172,9943515,9944994	Gene ID= ENSG00000163703.17 TPM= 31.53 Transcript Type= protein_coding
chr3	9933845	9944999	9933845	9944999	+	ENST00000452070.5@CRELD1	ENST00000452070.5	protein_coding	9933845,9934420,9934835,9937562,9938015,9940850,9941111,9942813,9943077,9943381,9944365	9933920,9934612,9934917,9937672,9938106,9941026,9941206,9942896,9943172,9943515,9944999	Gene ID= ENSG00000163703.17 TPM= 42.03 Transcript Type= protein_coding
chr3	9933856	9945032	9933856	9945032	+	ENST00000326434.9@CRELD1	ENST00000326434.9	protein_coding	9933856,9934420,9934835,9937562,9938015,9940850,9941111,9942813,9943077,9943381,9943902,9944365	9933920,9934612,9934917,9937672,9938106,9941026,9941206,9942896,9943172,9943515,9944095,9945032	Gene ID= ENSG00000163703.17 TPM= 8.17 Transcript Type= protein_coding
chr3	9945542	9952374	9945542	9952374	-	ENST00000295984.7@PRRT3	ENST00000295984.7	protein_coding	9952322,9949101,9948758,9946085,9945542	9952374,9950172,9948913,9948001,9945711	Gene ID= ENSG00000163704.11 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr3	9947404	9954787	9947404	9954787	+	ENST00000431558.1@PRRT3-AS1	ENST00000431558.1	antisense_RNA	9947404,9948067,9948355,9954604	9947604,9948180,9948469,9954787	Gene ID= ENSG00000230082.1 TPM= 1.17 Transcript Type= antisense_RNA
chr3	9963967	9986837	9963967	9986837	-	transcript344.chr3.nic@EMC3	transcript344.chr3.nic	protein_coding	9986507,9981634,9977389,9976957,9974384,9973628,9970582,9969719,9963967	9986837,9981747,9977446,9977050,9974488,9973709,9970661,9969801,9964197	Gene ID= ENSG00000125037.12 TPM= 10.51 Transcript Type= NA
chr3	10017497	10026365	10017497	10026365	-	ENST00000424691.1@CIDECP	ENST00000424691.1	transcribed_unprocessed_pseudogene	10026041,10023560,10017497	10026365,10023747,10018071	Gene ID= ENSG00000186162.10 TPM= 17.51 Transcript Type= processed_transcript
chr3	10115675	10126917	10115675	10126917	+	transcript357.chr3.nnic@BRK1	transcript357.chr3.nnic	protein_coding	10115675,10118906,10125626,10126269	10115819,10118970,10125708,10126917	Gene ID= ENSG00000254999.3 TPM= 4.67 Transcript Type= NA
chr3	10115592	10127190	10115592	10127190	+	ENST00000530758.1@BRK1	ENST00000530758.1	protein_coding	10115592,10125626,10126269	10115819,10125708,10127190	Gene ID= ENSG00000254999.3 TPM= 177.47 Transcript Type= protein_coding
chr3	10141008	10152220	10141008	10152220	+	ENST00000256474.2@VHL	ENST00000256474.2	protein_coding	10141008,10146514,10149787	10142187,10146636,10152220	Gene ID= ENSG00000134086.7 TPM= 33.28 Transcript Type= protein_coding
chr3	10141788	10152082	10141788	10152082	+	ENST00000345392.2@VHL	ENST00000345392.2	protein_coding	10141788,10149787	10142187,10152082	Gene ID= ENSG00000134086.7 TPM= 6.42 Transcript Type= protein_coding
chr3	10142343	10144158	10142343	10144158	-	transcript373.chr3.nnic@NA	transcript373.chr3.nnic	NA	10142343	10144158	Gene ID= novel_gene_chr3_374 TPM= 17.51 Transcript Type= NA
chr3	10147668	10150441	10147668	10150441	-	transcript375.chr3.nnic@NA	transcript375.chr3.nnic	NA	10147668	10150441	Gene ID= novel_gene_chr3_376 TPM= 2.34 Transcript Type= NA
chr3	10164865	10243743	10164865	10243743	+	ENST00000256458.4@IRAK2	ENST00000256458.4	protein_coding	10164865,10177838,10200369,10209589,10213207,10213484,10216934,10219680,10222636,10226371,10234459,10238748,10242116	10165048,10178020,10200515,10209692,10213401,10213548,10217048,10219789,10222831,10226433,10234659,10239039,10243743	Gene ID= ENSG00000134070.4 TPM= 10.51 Transcript Type= protein_coding
chr3	10300931	10321072	10300931	10321072	-	transcript389.chr3.nic@SEC13	transcript389.chr3.nic	protein_coding	10320509,10318050,10315321,10312579,10311965,10305559,10305033,10304026,10300931	10321072,10318094,10315436,10312730,10312098,10305692,10305156,10304172,10301374	Gene ID= ENSG00000157020.17 TPM= 14.59 Transcript Type= NA
chr3	10300950	10321123	10300950	10321123	-	transcript397.chr3.nic@SEC13	transcript397.chr3.nic	protein_coding	10321050,10318050,10315321,10312579,10311965,10305559,10305033,10304026,10300950	10321123,10318094,10315436,10312730,10312098,10305692,10305156,10304172,10301147	Gene ID= ENSG00000157020.17 TPM= 5.84 Transcript Type= NA
chr3	10300931	10321178	10300931	10321178	-	ENST00000350697.7@SEC13	ENST00000350697.7	protein_coding	10321050,10318050,10315321,10312579,10311965,10305559,10305033,10304026,10300931	10321178,10318094,10315436,10312730,10312098,10305692,10305156,10304172,10301374	Gene ID= ENSG00000157020.17 TPM= 167.55 Transcript Type= protein_coding
chr3	10300931	10321082	10300931	10321082	-	ENST00000337354.8@SEC13	ENST00000337354.8	protein_coding	10321050,10319139,10318050,10315321,10312579,10311965,10305559,10305033,10304026,10300931	10321082,10319172,10318094,10315436,10312730,10312098,10305692,10305156,10304172,10301374	Gene ID= ENSG00000157020.17 TPM= 2.92 Transcript Type= protein_coding
chr3	10300950	10321061	10300950	10321061	-	ENST00000397117.5@SEC13	ENST00000397117.5	protein_coding	10320509,10318050,10315321,10312579,10311965,10305559,10305033,10304026,10300950	10321061,10318094,10315436,10312730,10312098,10305692,10305156,10304172,10301147	Gene ID= ENSG00000157020.17 TPM= 1.17 Transcript Type= protein_coding
chr3	10311573	10321093	10311573	10321093	-	ENST00000397105.7@SEC13	ENST00000397105.7	protein_coding	10321050,10318050,10315321,10312579,10311573	10321093,10318094,10315436,10312730,10312098	Gene ID= ENSG00000157020.17 TPM= 1.17 Transcript Type= retained_intron
chr3	10300931	10302543	10300931	10302543	-	transcript401.chr3.nnic@NA	transcript401.chr3.nnic	NA	10300931	10302543	Gene ID= novel_gene_chr3_402 TPM= 3.5 Transcript Type= NA
chr3	11154528	11263253	11154528	11263253	+	ENST00000431010.2@HRH1	ENST00000431010.2	protein_coding	11154528,11259003	11154554,11263253	Gene ID= ENSG00000196639.6 TPM= 1.17 Transcript Type= protein_coding
chr3	11138182	11140492	11138182	11140492	-	transcript436.chr3.nnic@NA	transcript436.chr3.nnic	NA	11138182	11140492	Gene ID= novel_gene_chr3_437 TPM= 3.5 Transcript Type= NA
chr3	11202584	11225835	11202584	11225835	-	transcript414.chr3.nnic@NA	transcript414.chr3.nnic	NA	11225700,11207375,11202584	11225835,11207398,11205892	Gene ID= novel_gene_chr3_415 TPM= 7.01 Transcript Type= NA
chr3	11202584	11225913	11202584	11225913	-	transcript417.chr3.nnic@NA	transcript417.chr3.nnic	NA	11225700,11207280,11202584	11225913,11207398,11206852	Gene ID= novel_gene_chr3_418 TPM= 7.59 Transcript Type= NA
chr3	11272397	11350948	11272397	11350948	+	transcript447.chr3.nic@ATG7	transcript447.chr3.nic	protein_coding	11272397,11298686,11299362,11306943,11308984,11313304,11315344,11331340,11332972,11340645,11342135,11347877	11272430,11298855,11299416,11307060,11309061,11313420,11315493,11331428,11333093,11340735,11342279,11350948	Gene ID= ENSG00000197548.12 TPM= 3.5 Transcript Type= NA
chr3	11272416	11557665	11272416	11557665	+	ENST00000354449.7@ATG7	ENST00000354449.7	protein_coding	11272416,11298686,11299362,11306943,11308984,11313304,11315344,11331340,11332972,11340645,11342135,11347877,11358418,11360581,11362813,11364659,11379972,11426804,11554811	11272430,11298855,11299416,11307060,11309061,11313420,11315493,11331428,11333093,11340735,11342279,11348035,11358612,11360784,11362928,11364734,11380052,11426926,11557665	Gene ID= ENSG00000197548.12 TPM= 4.67 Transcript Type= protein_coding
chr3	11272416	11555083	11272416	11555083	+	ENST00000354956.9@ATG7	ENST00000354956.9	protein_coding	11272416,11298686,11299362,11306943,11308984,11313304,11315344,11331340,11332972,11340645,11342135,11347877,11358418,11360581,11362813,11364659,11426804,11554811	11272430,11298855,11299416,11307060,11309061,11313420,11315493,11331428,11333093,11340735,11342279,11348035,11358612,11360784,11362928,11364734,11426926,11555083	Gene ID= ENSG00000197548.12 TPM= 1.17 Transcript Type= protein_coding
chr3	11556070	11719652	11556070	11719652	-	transcript452.chr3.nic@VGLL4	transcript452.chr3.nic	protein_coding	11719417,11702971,11601833,11564797,11559332,11556070	11719652,11703047,11602022,11565019,11559455,11558827	Gene ID= ENSG00000144560.14 TPM= 32.69 Transcript Type= NA
chr3	11556070	11561129	11556070	11561129	-	transcript460.chr3.nic@VGLL4	transcript460.chr3.nic	protein_coding	11559332,11556070	11561129,11558827	Gene ID= ENSG00000144560.14 TPM= 21.02 Transcript Type= NA
chr3	11558476	11643924	11558476	11643924	-	ENST00000430365.6@VGLL4	ENST00000430365.6	protein_coding	11643437,11601833,11564797,11559332,11558476	11643924,11602022,11565019,11559455,11558827	Gene ID= ENSG00000144560.14 TPM= 3.5 Transcript Type= protein_coding
chr3	11790442	11846919	11790442	11846919	-	ENST00000273037.9@TAMM41	ENST00000273037.9	protein_coding	11846502,11844029,11839222,11829714,11817192,11809517,11790442	11846919,11844211,11839314,11829864,11817337,11809682,11790581	Gene ID= ENSG00000144559.10 TPM= 2.34 Transcript Type= protein_coding
chr3	12004402	12191400	12004402	12191400	+	ENST00000621198.4@SYN2	ENST00000621198.4	protein_coding	12004402,12140651,12141905,12145679,12151237,12161546,12162012,12167234,12168376,12169757,12183312,12187369,12190490	12004928,12140708,12141996,12145835,12151326,12161608,12162154,12167308,12168478,12169906,12183372,12187612,12191400	Gene ID= ENSG00000157152.16 TPM= 2.34 Transcript Type= protein_coding
chr3	12153051	12159351	12153051	12159351	-	ENST00000287814.4@TIMP4	ENST00000287814.4	protein_coding	12158702,12157385,12156820,12154327,12153051	12159351,12157482,12156934,12154451,12153712	Gene ID= ENSG00000157150.4 TPM= 5.84 Transcript Type= protein_coding
chr3	12287860	12434344	12287860	12434344	+	ENST00000309576.10@PPARG	ENST00000309576.10	protein_coding	12287860,12312380,12379704,12381322,12392614,12405882,12416704,12433898	12288020,12312453,12379931,12381491,12392752,12406081,12417154,12434344	Gene ID= ENSG00000132170.19 TPM= 23.74 Transcript Type= protein_coding
chr3	12289069	12434344	12289069	12434344	+	transcript480.chr3.nic@PPARG	transcript480.chr3.nic	protein_coding	12289069,12379704,12381322,12392614,12405882,12416704,12433898	12289134,12379931,12381491,12392752,12406081,12417154,12434344	Gene ID= ENSG00000132170.19 TPM= 14.4 Transcript Type= NA
chr3	12287901	12434311	12287901	12434311	+	ENST00000397015.6@PPARG	ENST00000397015.6	protein_coding	12287901,12379704,12381322,12392614,12405882,12416704,12433898	12288020,12379931,12381491,12392752,12406081,12417154,12434311	Gene ID= ENSG00000132170.19 TPM= 24.52 Transcript Type= protein_coding
chr3	12351472	12434356	12351472	12434356	+	ENST00000287820.10@PPARG	ENST00000287820.10	protein_coding	12351472,12379704,12381322,12392614,12405882,12416704,12433898	12351674,12379931,12381491,12392752,12406081,12417154,12434356	Gene ID= ENSG00000132170.19 TPM= 6.22 Transcript Type= protein_coding
chr3	12484460	12533317	12484460	12533317	+	transcript494.chr3.nic@TSEN2	transcript494.chr3.nic	protein_coding	12484460,12489784,12492136,12496518,12503262,12505154,12516611,12519059,12528888,12529762,12531570,12532662	12484517,12489989,12492217,12496554,12503784,12505231,12516661,12519197,12528924,12529873,12531659,12533317	Gene ID= ENSG00000154743.17 TPM= 3.5 Transcript Type= NA
chr3	12484476	12533659	12484476	12533659	+	transcript495.chr3.nic@TSEN2	transcript495.chr3.nic	protein_coding	12484476,12489784,12492136,12496518,12503262,12505154,12516611,12519059,12528888,12529762,12532662	12484517,12489989,12492217,12496554,12503784,12505231,12516661,12519197,12528924,12531659,12533659	Gene ID= ENSG00000154743.17 TPM= 2.34 Transcript Type= NA
chr3	12484477	12505804	12484477	12505804	+	transcript500.chr3.nic@TSEN2	transcript500.chr3.nic	protein_coding	12484477,12489784,12492136,12496518,12503262,12505154	12484517,12489989,12492217,12496554,12503784,12505804	Gene ID= ENSG00000154743.17 TPM= 2.34 Transcript Type= NA
chr3	12484432	12528924	12484432	12528924	+	ENST00000446004.5@TSEN2	ENST00000446004.5	protein_coding	12484432,12489784,12492136,12496518,12503262,12505154,12516611,12519059,12528888	12484517,12489989,12492217,12496554,12503784,12505231,12516661,12519197,12528924	Gene ID= ENSG00000154743.17 TPM= 1.17 Transcript Type= protein_coding
chr3	12557014	12583713	12557014	12583713	+	ENST00000170447.11@MKRN2	ENST00000170447.11	protein_coding	12557014,12568875,12570071,12572069,12574792,12576631,12581808,12582116	12557176,12569003,12570252,12572373,12575006,12576741,12581952,12583713	Gene ID= ENSG00000075975.15 TPM= 77.06 Transcript Type= protein_coding
chr3	12583601	12664226	12583601	12664226	-	ENST00000251849.8@RAF1	ENST00000251849.8	protein_coding	12663813,12618515,12611950,12609233,12608766,12606201,12604136,12600388,12600152,12599691,12591708,12590798,12587591,12585681,12585122,12584847,12583601	12664226,12618747,12612062,12609335,12608923,12606299,12604289,12600415,12600279,12599808,12591792,12590974,12587637,12585799,12585253,12584981,12584657	Gene ID= ENSG00000132155.11 TPM= 98.66 Transcript Type= protein_coding
chr3	12583601	12664203	12583601	12664203	-	transcript511.chr3.nic@RAF1	transcript511.chr3.nic	protein_coding	12663813,12618515,12611950,12609233,12608766,12604136,12600388,12600152,12599691,12591708,12590798,12587591,12585681,12585122,12584847,12583601	12664203,12618747,12612062,12609335,12608923,12604289,12600415,12600279,12599808,12591792,12590974,12587637,12585799,12585253,12584981,12584657	Gene ID= ENSG00000132155.11 TPM= 18.68 Transcript Type= NA
chr3	12583601	12664128	12583601	12664128	-	transcript512.chr3.nic@RAF1	transcript512.chr3.nic	protein_coding	12663813,12618515,12611950,12609233,12608766,12606201,12604136,12600388,12600152,12599691,12591708,12590798,12585681,12585122,12584847,12583601	12664128,12618747,12612062,12609335,12608923,12606299,12604289,12600415,12600279,12599808,12591792,12590974,12587637,12585253,12584981,12584657	Gene ID= ENSG00000132155.11 TPM= 4.09 Transcript Type= NA
chr3	12657566	12659443	12657566	12659443	+	transcript529.chr3.nnic@NA	transcript529.chr3.nnic	NA	12657566	12659443	Gene ID= novel_gene_chr3_530 TPM= 3.5 Transcript Type= NA
chr3	12733525	12759539	12733525	12759539	-	ENST00000314124.11@TMEM40	ENST00000314124.11	protein_coding	12759191,12749760,12748655,12743900,12742454,12738553,12738136,12737707,12736764,12736578,12735555,12733525	12759539,12749840,12748792,12743989,12742507,12738588,12738168,12737754,12736835,12736652,12735617,12734793	Gene ID= ENSG00000088726.15 TPM= 1.17 Transcript Type= protein_coding
chr3	12796680	12834803	12796680	12834803	+	ENST00000456430.6@CAND2	ENST00000456430.6	protein_coding	12796680,12803488,12807306,12808210,12810059,12812990,12813246,12815141,12815867,12816374,12820086,12825470,12827440,12831465,12833755	12796788,12803631,12807460,12808333,12810324,12813095,12813388,12815433,12816008,12817876,12820181,12825639,12827604,12831572,12834803	Gene ID= ENSG00000144712.11 TPM= 16.35 Transcript Type= protein_coding
chr3	12834485	12841588	12834485	12841588	-	ENST00000429711.6@RPL32	ENST00000429711.6	protein_coding	12841494,12840142,12839349,12834485	12841588,12840242,12839530,12836223	Gene ID= ENSG00000144713.12 TPM= 502.07 Transcript Type= protein_coding
chr3	12834946	12841582	12834946	12841582	-	ENST00000396957.5@RPL32	ENST00000396957.5	protein_coding	12841494,12840142,12839349,12834946	12841582,12840341,12839530,12836223	Gene ID= ENSG00000144713.12 TPM= 3.5 Transcript Type= protein_coding
chr3	12836050	12841545	12836050	12841545	-	ENST00000435983.5@RPL32	ENST00000435983.5	protein_coding	12841494,12840142,12839349,12836050	12841545,12840353,12839530,12836223	Gene ID= ENSG00000144713.12 TPM= 3.5 Transcript Type= protein_coding
chr3	12836102	12841544	12836102	12841544	-	ENST00000457131.1@RPL32	ENST00000457131.1	protein_coding	12841494,12840142,12839349,12836102	12841544,12840341,12839530,12836223	Gene ID= ENSG00000144713.12 TPM= 1.17 Transcript Type= protein_coding
chr3	12897220	12967668	12897220	12967668	-	ENST00000273221.8@IQSEC1	ENST00000273221.8	protein_coding	12967387,12941571,12935448,12924581,12922120,12920430,12915594,12915104,12913428,12911629,12909273,12908349,12902773,12897220	12967668,12941865,12936697,12924742,12922242,12920596,12915733,12915133,12913553,12911728,12909434,12908525,12902822,12899434	Gene ID= ENSG00000144711.13 TPM= 24.52 Transcript Type= protein_coding
chr3	12994190	12996831	12994190	12996831	+	transcript545.chr3.nnic@NA	transcript545.chr3.nnic	NA	12994190	12996831	Gene ID= novel_gene_chr3_546 TPM= 2.34 Transcript Type= NA
chr3	13316235	13420249	13316235	13420249	-	transcript552.chr3.nnic@NUP210	transcript552.chr3.nnic	protein_coding	13420060,13399725,13397357,13391211,13388303,13386275,13379563,13378912,13377456,13376291,13375504,13373718,13371834,13365946,13360270,13358222,13353915,13353554,13352080,13351879,13343175,13341996,13341758,13316235	13420249,13399861,13397488,13391307,13388453,13386407,13379721,13378980,13377562,13376431,13375641,13373873,13372032,13366091,13360491,13358395,13354107,13353660,13352184,13351980,13343303,13342123,13341883,13317781	Gene ID= ENSG00000132182.11 TPM= 2.63 Transcript Type= NA
chr3	13348461	13420318	13348461	13420318	-	transcript553.chr3.nnic@NUP210	transcript553.chr3.nnic	protein_coding	13420060,13399725,13397357,13391211,13388303,13386275,13379563,13378912,13377456,13376291,13375504,13373718,13371834,13365946,13360270,13358222,13353915,13353554,13352080,13351879,13348461	13420318,13399861,13397488,13391307,13388453,13386407,13379721,13378980,13377562,13376431,13375641,13373873,13372032,13366091,13360491,13358395,13354107,13353660,13352184,13351980,13348847	Gene ID= ENSG00000132182.11 TPM= 2.63 Transcript Type= NA
chr3	13317632	13320651	13317632	13320651	-	transcript562.chr3.nic@NUP210	transcript562.chr3.nic	protein_coding	13319230,13317632	13320651,13319155	Gene ID= ENSG00000132182.11 TPM= 2.34 Transcript Type= NA
chr3	13316235	13420309	13316235	13420309	-	ENST00000254508.6@NUP210	ENST00000254508.6	protein_coding	13420060,13399725,13397357,13391211,13388303,13386275,13379563,13378912,13377456,13376291,13375504,13373718,13371834,13365946,13360270,13358222,13353915,13353554,13352080,13351879,13343175,13341996,13341748,13340236,13339854,13337837,13336787,13335454,13332293,13330460,13328771,13327217,13325795,13323309,13322193,13321585,13319763,13319230,13319072,13316235	13420309,13399861,13397488,13391307,13388453,13386407,13379721,13378980,13377562,13376431,13375641,13373873,13372032,13366091,13360491,13358395,13354107,13353660,13352184,13351980,13343303,13342123,13341883,13340298,13340033,13337917,13336918,13335612,13332384,13330634,13328946,13327437,13325931,13323432,13322339,13321835,13319979,13319325,13319155,13317781	Gene ID= ENSG00000132182.11 TPM= 24.81 Transcript Type= protein_coding
chr3	13351663	13420309	13351663	13420309	-	ENST00000420141.2@NUP210	ENST00000420141.2	protein_coding	13420060,13399725,13397357,13391211,13388303,13386275,13379563,13378912,13377456,13376291,13375504,13373718,13371834,13365946,13360270,13358222,13353915,13353554,13352080,13351663	13420309,13399861,13397488,13391307,13388453,13386407,13379721,13378980,13377562,13376431,13375641,13373873,13372032,13366091,13360491,13358395,13354107,13353660,13352184,13351980	Gene ID= ENSG00000132182.11 TPM= 3.79 Transcript Type= retained_intron
chr3	13480338	13506416	13480338	13506416	+	transcript567.chr3.nic@HDAC11	transcript567.chr3.nic	protein_coding	13480338,13481246,13483464,13496736,13498513,13500713,13501871,13502884,13504094,13504468	13480446,13481394,13483564,13496852,13498555,13500789,13501933,13502980,13504272,13506416	Gene ID= ENSG00000163517.14 TPM= 18.48 Transcript Type= NA
chr3	13480165	13506416	13480165	13506416	+	ENST00000295757.7@HDAC11	ENST00000295757.7	protein_coding	13480165,13481246,13483464,13496736,13498513,13500713,13501871,13502884,13504094,13504468	13480349,13481394,13483564,13496852,13498555,13500789,13501933,13502980,13504272,13506416	Gene ID= ENSG00000163517.14 TPM= 51.18 Transcript Type= protein_coding
chr3	13480288	13506416	13480288	13506416	+	transcript576.chr3.nnic@HDAC11	transcript576.chr3.nnic	protein_coding	13480288,13481246,13483464,13496736,13498513,13504094,13504468	13480349,13481394,13483564,13496852,13498555,13504272,13506416	Gene ID= ENSG00000163517.14 TPM= 3.89 Transcript Type= NA
chr3	13549098	13638422	13549098	13638422	+	transcript578.chr3.nnic@FBLN2	transcript578.chr3.nnic	protein_coding	13549098,13570315,13571316,13608062,13609513,13613984,13618076,13618904,13619730,13621775,13626445,13627832,13628905,13629164,13629820,13630699,13631329,13636445,13637562	13549208,13570970,13571661,13608173,13609642,13614164,13618285,13619017,13619831,13621915,13626579,13627969,13629048,13629292,13629945,13630815,13631457,13636568,13638422	Gene ID= ENSG00000163520.13 TPM= 6.22 Transcript Type= NA
chr3	13549131	13638422	13549131	13638422	+	ENST00000404922.7@FBLN2	ENST00000404922.7	protein_coding	13549131,13570315,13608062,13609513,13613984,13618076,13618904,13619730,13621775,13626445,13627832,13628905,13629164,13629820,13630699,13631329,13636445,13637562	13549208,13571661,13608173,13609642,13614164,13618285,13619017,13619831,13621915,13626579,13627969,13629048,13629292,13629945,13630815,13631457,13636568,13638422	Gene ID= ENSG00000163520.13 TPM= 48.26 Transcript Type= protein_coding
chr3	13549181	13638422	13549181	13638422	+	ENST00000295760.11@FBLN2	ENST00000295760.11	protein_coding	13549181,13570315,13608062,13609513,13613984,13618076,13618904,13619730,13626445,13627832,13628905,13629164,13629820,13630699,13631329,13636445,13637562	13549208,13571661,13608173,13609642,13614164,13618285,13619017,13619831,13626579,13627969,13629048,13629292,13629945,13630815,13631457,13636568,13638422	Gene ID= ENSG00000163520.13 TPM= 37.75 Transcript Type= protein_coding
chr3	13816258	13880121	13816258	13880121	-	ENST00000285018.4@WNT7A	ENST00000285018.4	protein_coding	13879746,13874947,13854532,13816258	13880121,13875173,13854803,13819423	Gene ID= ENSG00000154764.5 TPM= 23.35 Transcript Type= protein_coding
chr3	14112077	14124826	14112077	14124826	-	transcript591.chr3.nnic@CHCHD4	transcript591.chr3.nnic	protein_coding	14124699,14116426,14112077	14124826,14116524,14113194	Gene ID= ENSG00000163528.12 TPM= 2.34 Transcript Type= NA
chr3	14112093	14124858	14112093	14124858	-	ENST00000396914.3@CHCHD4	ENST00000396914.3	protein_coding	14124655,14116426,14112093	14124858,14116524,14113194	Gene ID= ENSG00000163528.12 TPM= 23.35 Transcript Type= protein_coding
chr3	14112077	14124870	14112077	14124870	-	ENST00000295767.9@CHCHD4	ENST00000295767.9	protein_coding	14124655,14121917,14116426,14112077	14124870,14122086,14116524,14113194	Gene ID= ENSG00000163528.12 TPM= 9.34 Transcript Type= protein_coding
chr3	14124940	14143679	14124940	14143679	+	ENST00000306077.4@TMEM43	ENST00000306077.4	protein_coding	14124940,14129412,14130822,14131580,14132546,14132866,14133739,14134770,14135158,14135807,14139180,14141593	14125205,14129561,14130956,14131674,14132595,14132935,14133809,14134891,14135232,14135908,14139297,14143679	Gene ID= ENSG00000170876.7 TPM= 288.4 Transcript Type= protein_coding
chr3	14145147	14178583	14145147	14178583	-	transcript593.chr3.nnic@XPC	transcript593.chr3.nnic	protein_coding	14178466,14172867,14170438,14168257,14167169,14165428,14164813,14159741,14158011,14156335,14153879,14152335,14148814,14148562,14147908,14147290,14145147	14178583,14173062,14170550,14168380,14167253,14165585,14164933,14159830,14158892,14156495,14154033,14152416,14148948,14148731,14148001,14147379,14146159	Gene ID= ENSG00000154767.14 TPM= 7.01 Transcript Type= NA
chr3	14145147	14178783	14145147	14178783	-	ENST00000285021.11@XPC	ENST00000285021.11	protein_coding	14178466,14172867,14170438,14168257,14167169,14165428,14164813,14159741,14158011,14156335,14152335,14148814,14148562,14147908,14147290,14145147	14178783,14173062,14170550,14168380,14167253,14165585,14164933,14159830,14158892,14156495,14152416,14148948,14148731,14148001,14147379,14146159	Gene ID= ENSG00000154767.14 TPM= 72.39 Transcript Type= protein_coding
chr3	14178358	14201119	14178358	14201119	+	ENST00000306024.3@LSM3	ENST00000306024.3	protein_coding	14178358,14181560,14183937,14198036	14178881,14181670,14184032,14201119	Gene ID= ENSG00000170860.3 TPM= 33.86 Transcript Type= protein_coding
chr3	14402576	14489347	14402576	14489347	+	ENST00000622186.4@SLC6A6	ENST00000622186.4	protein_coding	14402576,14416412,14443624,14445717,14447582,14457950,14466516,14467853,14468088,14472205,14477205,14478466,14479085,14481671,14484867	14402847,14416453,14443863,14445851,14447816,14458082,14466650,14467956,14468212,14472317,14477342,14478568,14479185,14481841,14489347	Gene ID= ENSG00000131389.16 TPM= 39.11 Transcript Type= protein_coding
chr3	14402576	14489349	14402576	14489349	+	ENST00000618278.4@SLC6A6	ENST00000618278.4	protein_coding	14402576,14416412,14443628,14445717,14447582,14457950,14466516,14467853,14472205,14477205,14478466,14479085,14481671,14484867	14402847,14416453,14443863,14445851,14447816,14458082,14466650,14467956,14472317,14477342,14478568,14479185,14481841,14489349	Gene ID= ENSG00000131389.16 TPM= 32.11 Transcript Type= nonsense_mediated_decay
chr3	14451506	14456597	14451506	14456597	+	transcript626.chr3.nnic@NA	transcript626.chr3.nnic	NA	14451506	14456597	Gene ID= novel_gene_chr3_627 TPM= 2.34 Transcript Type= NA
chr3	14651762	14671203	14651762	14671203	+	transcript634.chr3.nic@CCDC174	transcript634.chr3.nic	protein_coding	14651762,14654426,14655529,14658871,14661530,14665028,14666805,14669934,14670896	14651878,14654530,14655629,14658929,14661707,14665123,14668181,14670086,14671203	Gene ID= ENSG00000154781.15 TPM= 2.34 Transcript Type= NA
chr3	14651764	14672659	14651764	14672659	+	ENST00000383794.6@CCDC174	ENST00000383794.6	protein_coding	14651764,14654426,14655529,14658871,14661530,14665028,14666805,14667424,14668049,14669934,14670896	14651878,14654530,14655629,14658929,14661707,14665123,14666947,14667518,14668181,14670086,14672659	Gene ID= ENSG00000154781.15 TPM= 5.84 Transcript Type= protein_coding
chr3	14810544	14934503	14810544	14934503	+	transcript639.chr3.nnic@FGD5	transcript639.chr3.nnic	protein_coding	14810544,14818956,14864128,14880572,14880742,14897509,14897939,14898739,14900403,14901003,14907640,14910861,14917249,14918754,14921918,14922411,14923046,14924002,14926070,14932577,14933131	14810865,14821596,14864260,14880630,14880772,14897669,14898095,14898826,14900453,14901061,14907711,14910929,14917332,14918833,14922017,14922548,14923175,14924138,14926198,14932731,14934503	Gene ID= ENSG00000154783.11 TPM= 16.73 Transcript Type= NA
chr3	14810682	14933439	14810682	14933439	+	transcript642.chr3.nnic@FGD5	transcript642.chr3.nnic	protein_coding	14810682,14818956,14864128,14880572,14880742,14897509,14897939,14898739,14900403,14901003,14907640,14910861,14917249,14918754,14921918,14922411,14923046,14924002,14932577,14933131	14810865,14821596,14864260,14880630,14880772,14897669,14898095,14898826,14900453,14901061,14907711,14910929,14917332,14918833,14922017,14922548,14923175,14924138,14932731,14933439	Gene ID= ENSG00000154783.11 TPM= 5.84 Transcript Type= NA
chr3	14942784	14947507	14942784	14947507	-	ENST00000424349.1@FGD5-AS1	ENST00000424349.1	antisense_RNA	14947087,14942784	14947507,14946154	Gene ID= ENSG00000225733.5 TPM= 95.74 Transcript Type= antisense_RNA
chr3	14944693	14948424	14944693	14948424	-	ENST00000426200.1@FGD5-AS1	ENST00000426200.1	antisense_RNA	14948013,14944693	14948424,14946154	Gene ID= ENSG00000225733.5 TPM= 1.17 Transcript Type= antisense_RNA
chr3	14945024	14947505	14945024	14947505	-	ENST00000440079.1@FGD5-AS1	ENST00000440079.1	antisense_RNA	14947110,14945024	14947505,14946154	Gene ID= ENSG00000225733.5 TPM= 3.5 Transcript Type= antisense_RNA
chr3	15033640	15049273	15033640	15049273	+	transcript663.chr3.nic@NR2C2	transcript663.chr3.nic	protein_coding	15033640,15038000,15039122,15042834	15034809,15038137,15039227,15049273	Gene ID= ENSG00000177463.15 TPM= 6.42 Transcript Type= NA
chr3	15033640	15049273	15033640	15049273	+	transcript677.chr3.nic@NR2C2	transcript677.chr3.nic	protein_coding	15033640,15038000,15042834	15034809,15039227,15049273	Gene ID= ENSG00000177463.15 TPM= 6.42 Transcript Type= NA
chr3	14947584	15043349	14947584	15043349	+	ENST00000425241.5@NR2C2	ENST00000425241.5	protein_coding	14947584,15003876,15013589,15016152,15020753,15023200,15024115,15028586,15030275,15032379,15034670,15038000,15039122,15042834	14947906,15003986,15013789,15016254,15020932,15023347,15024208,15028719,15030452,15032500,15034809,15038137,15039227,15043349	Gene ID= ENSG00000177463.15 TPM= 1.17 Transcript Type= protein_coding
chr3	15042251	15065317	15042251	15065317	-	transcript658.chr3.nic@MRPS25	transcript658.chr3.nic	protein_coding	15065061,15059369,15053380,15049708,15042251	15065317,15059475,15053467,15052633,15043022	Gene ID= ENSG00000131368.7 TPM= 2.34 Transcript Type= NA
chr3	15048518	15065335	15048518	15065335	-	ENST00000253686.6@MRPS25	ENST00000253686.6	protein_coding	15065061,15059369,15053380,15048518	15065335,15059475,15053467,15052633	Gene ID= ENSG00000131368.7 TPM= 4.67 Transcript Type= protein_coding
chr3	15059020	15065317	15059020	15065317	-	transcript693.chr3.nic@MRPS25	transcript693.chr3.nic	protein_coding	15065061,15059020	15065317,15059475	Gene ID= ENSG00000131368.7 TPM= 2.34 Transcript Type= NA
chr3	15060143	15063060	15060143	15063060	+	transcript694.chr3.nnic@NA	transcript694.chr3.nnic	NA	15060143	15063060	Gene ID= novel_gene_chr3_695 TPM= 2.34 Transcript Type= NA
chr3	15070073	15099148	15070073	15099148	-	ENST00000253699.7@RBSN	ENST00000253699.7	protein_coding	15099035,15098119,15096535,15095973,15090399,15085861,15085000,15084735,15082367,15080732,15078075,15077062,15075606,15070073	15099148,15098274,15096710,15096288,15090539,15085961,15085045,15084896,15082608,15080802,15078161,15077164,15075710,15074930	Gene ID= ENSG00000131381.12 TPM= 8.17 Transcript Type= protein_coding
chr3	15073605	15099163	15073605	15099163	-	ENST00000476527.6@RBSN	ENST00000476527.6	protein_coding	15099035,15096535,15095973,15090399,15085861,15085000,15084735,15082367,15080732,15078075,15077062,15075606,15073605	15099163,15096710,15096288,15090539,15085961,15085045,15084896,15082608,15080802,15078161,15077164,15075710,15074930	Gene ID= ENSG00000131381.12 TPM= 1.17 Transcript Type= protein_coding
chr3	15096619	15098476	15096619	15098476	+	transcript716.chr3.nnic@NA	transcript716.chr3.nnic	NA	15096619	15098476	Gene ID= novel_gene_chr3_717 TPM= 2.34 Transcript Type= NA
chr3	15206201	15252302	15206201	15252302	+	transcript722.chr3.nic@CAPN7	transcript722.chr3.nic	protein_coding	15206201,15212104,15217425,15218473,15220781,15223475,15227839,15228974,15230442,15232519,15233867,15235025,15240473,15240754,15242178,15245526,15246732,15247327,15250931,15251116	15206597,15212212,15217582,15218540,15220981,15223561,15227965,15229059,15230535,15232665,15233973,15235145,15240617,15240853,15242253,15245671,15246794,15247457,15251023,15252302	Gene ID= ENSG00000131375.9 TPM= 3.5 Transcript Type= NA
chr3	15206226	15252302	15206226	15252302	+	transcript724.chr3.nic@CAPN7	transcript724.chr3.nic	protein_coding	15206226,15217425,15218473,15220781,15223475,15227839,15228974,15230442,15232519,15233867,15235025,15240473,15240754,15241453,15242178,15245526,15246732,15247327,15250931,15251116	15206597,15217582,15218540,15220981,15223561,15227965,15229059,15230535,15232665,15233973,15235145,15240617,15240853,15241588,15242253,15245671,15246794,15247457,15251023,15252302	Gene ID= ENSG00000131375.9 TPM= 4.67 Transcript Type= NA
chr3	15206201	15252302	15206201	15252302	+	transcript725.chr3.nnic@CAPN7	transcript725.chr3.nnic	protein_coding	15206201,15212104,15217425,15218473,15220781,15223475,15227839,15228974,15230442,15232519,15233867,15235025,15240473,15240754,15242178,15246732,15247327,15250931,15251116	15206597,15212212,15217582,15218540,15220981,15223561,15227965,15229059,15230535,15232665,15233973,15235145,15240617,15240853,15242253,15246794,15247457,15251023,15252302	Gene ID= ENSG00000131375.9 TPM= 5.84 Transcript Type= NA
chr3	15206201	15236414	15206201	15236414	+	transcript729.chr3.nic@CAPN7	transcript729.chr3.nic	protein_coding	15206201,15212104,15217425,15218473,15220781,15223475,15227839,15228974,15230442,15232519,15233867,15235025	15206597,15212212,15217582,15218540,15220981,15223561,15227965,15229059,15230535,15232665,15233973,15236414	Gene ID= ENSG00000131375.9 TPM= 5.84 Transcript Type= NA
chr3	15254853	15332581	15254853	15332581	-	transcript732.chr3.nnic@SH3BP5	transcript732.chr3.nnic	protein_coding	15332271,15330504,15304103,15269713,15262159,15259761,15258831,15256853,15254853	15332581,15330566,15304231,15269877,15262289,15259803,15259020,15257113,15256303	Gene ID= ENSG00000131370.15 TPM= 4.67 Transcript Type= NA
chr3	15254853	15341411	15254853	15341411	-	transcript738.chr3.nic@SH3BP5	transcript738.chr3.nic	protein_coding	15341223,15330504,15304103,15269713,15262159,15259761,15258831,15256853,15254853	15341411,15330566,15304231,15269877,15262289,15259803,15259050,15257113,15256303	Gene ID= ENSG00000131370.15 TPM= 8.17 Transcript Type= NA
chr3	15254852	15332582	15254852	15332582	-	transcript743.chr3.nnic@SH3BP5	transcript743.chr3.nnic	protein_coding	15332271,15330504,15304103,15269713,15262159,15259761,15258831,15254852	15332582,15330566,15304231,15269877,15262289,15259803,15259050,15256303	Gene ID= ENSG00000131370.15 TPM= 7.01 Transcript Type= NA
chr3	15254853	15332629	15254853	15332629	-	ENST00000383791.7@SH3BP5	ENST00000383791.7	protein_coding	15332271,15330504,15304103,15269713,15262159,15259761,15258831,15256853,15254853	15332629,15330566,15304231,15269877,15262289,15259803,15259050,15257113,15256303	Gene ID= ENSG00000131370.15 TPM= 165.8 Transcript Type= protein_coding
chr3	15427355	15442613	15427355	15442613	+	ENST00000396842.6@EAF1	ENST00000396842.6	protein_coding	15427355,15429913,15432087,15434348,15436342,15439109	15427882,15430007,15432223,15434538,15436575,15442613	Gene ID= ENSG00000144597.13 TPM= 36.2 Transcript Type= protein_coding
chr3	15560704	15601831	15560704	15601831	-	ENST00000321169.9@HACL1	ENST00000321169.9	protein_coding	15601383,15601090,15596384,15591600,15589540,15586525,15585248,15582877,15579910,15574977,15573159,15571668,15568432,15567844,15564551,15563358,15560704	15601831,15601194,15596424,15591680,15589612,15586602,15585342,15582989,15580045,15575082,15573242,15571769,15568586,15568002,15564658,15563544,15560897	Gene ID= ENSG00000131373.14 TPM= 12.84 Transcript Type= protein_coding
chr3	15560747	15601569	15560747	15601569	-	ENST00000456194.6@HACL1	ENST00000456194.6	protein_coding	15601383,15601090,15596384,15589540,15586525,15585248,15582877,15579910,15574977,15573159,15571668,15568432,15567844,15564551,15563358,15560747	15601569,15601194,15596424,15589612,15586602,15585342,15582989,15580045,15575082,15573242,15571769,15568586,15568002,15564658,15563544,15560897	Gene ID= ENSG00000131373.14 TPM= 1.17 Transcript Type= protein_coding
chr3	15601742	15645822	15601742	15645822	+	ENST00000303498.9@BTD	ENST00000303498.9	protein_coding	15601742,15635424,15641908,15644316	15601894,15635688,15642057,15645822	Gene ID= ENSG00000169814.12 TPM= 25.69 Transcript Type= protein_coding
chr3	15601744	15642236	15601744	15642236	+	transcript782.chr3.nic@BTD	transcript782.chr3.nic	protein_coding	15601744,15635424,15641908	15601894,15635688,15642236	Gene ID= ENSG00000169814.12 TPM= 5.84 Transcript Type= NA
chr3	15651483	15653709	15651483	15653709	+	transcript784.chr3.nnic@NA	transcript784.chr3.nnic	NA	15651483	15653709	Gene ID= novel_gene_chr3_785 TPM= 3.5 Transcript Type= NA
chr3	15668603	15859809	15668603	15859809	-	transcript789.chr3.nic@ANKRD28	transcript789.chr3.nic	protein_coding	15859377,15814240,15795223,15766234,15751750,15737033,15735410,15724382,15720915,15714578,15713527,15712140,15711211,15709668,15707924,15696134,15695188,15694739,15690019,15686222,15686002,15685226,15679476,15679301,15678209,15677480,15676974,15675898,15668603	15859809,15814309,15795306,15766312,15751820,15737233,15735497,15724524,15721127,15714656,15713641,15712222,15711274,15709736,15708064,15696245,15695214,15694813,15690220,15686309,15686119,15685445,15679563,15679384,15678354,15677562,15677056,15675989,15670556	Gene ID= ENSG00000206560.11 TPM= 4.67 Transcript Type= NA
chr3	16174649	16229746	16174649	16229746	+	ENST00000339732.9@GALNT15	ENST00000339732.9	protein_coding	16174649,16195760,16200619,16208503,16211124,16212569,16219403,16219910,16222615,16227354	16175690,16195926,16200823,16208670,16211241,16212763,16219534,16220014,16222758,16229746	Gene ID= ENSG00000131386.17 TPM= 5.84 Transcript Type= protein_coding
chr3	16257978	16264972	16257978	16264972	-	ENST00000488423.1@DPH3	ENST00000488423.1	protein_coding	16264769,16264155,16257978	16264972,16264229,16260829	Gene ID= ENSG00000154813.9 TPM= 60.13 Transcript Type= protein_coding
chr3	16257979	16264969	16257979	16264969	-	ENST00000383775.4@DPH3	ENST00000383775.4	protein_coding	16264769,16257979	16264969,16260829	Gene ID= ENSG00000154813.9 TPM= 25.1 Transcript Type= protein_coding
chr3	16265160	16306086	16265160	16306086	+	ENST00000627468.2@OXNAD1	ENST00000627468.2	protein_coding	16265160,16269126,16270929,16271659,16286342,16294856,16301626,16302640,16303408	16265505,16269275,16271071,16271722,16286448,16294997,16301868,16302748,16306086	Gene ID= ENSG00000154814.13 TPM= 2.34 Transcript Type= protein_coding
chr3	16265192	16337757	16265192	16337757	+	transcript835.chr3.nic@OXNAD1	transcript835.chr3.nic	protein_coding	16265192,16269126,16270945,16286342,16294856,16301626,16302640,16303408,16337112	16265505,16269275,16271071,16286448,16294997,16301868,16302748,16303592,16337757	Gene ID= ENSG00000154814.13 TPM= 4.67 Transcript Type= NA
chr3	16315856	16512933	16315856	16512933	-	transcript827.chr3.nic@RFTN1	transcript827.chr3.nic	protein_coding	16512784,16493725,16433851,16409375,16377718,16370076,16357932,16326773,16323376,16315856	16512933,16493877,16434037,16409483,16378102,16370279,16358047,16326876,16323457,16317232	Gene ID= ENSG00000131378.13 TPM= 9.34 Transcript Type= NA
chr3	16315845	16482865	16315845	16482865	-	ENST00000432519.5@RFTN1	ENST00000432519.5	protein_coding	16482746,16433851,16409375,16377718,16370076,16357932,16326773,16323376,16315845	16482865,16434037,16409483,16378102,16370279,16358047,16326876,16323457,16317232	Gene ID= ENSG00000131378.13 TPM= 8.17 Transcript Type= protein_coding
chr3	16315856	16513706	16315856	16513706	-	ENST00000334133.8@RFTN1	ENST00000334133.8	protein_coding	16513442,16493725,16433851,16409375,16377718,16370076,16357932,16326773,16323376,16315856	16513706,16493877,16434037,16409483,16378102,16370279,16358047,16326876,16323457,16317232	Gene ID= ENSG00000131378.13 TPM= 51.37 Transcript Type= protein_coding
chr3	16884265	17090594	16884265	17090594	+	transcript841.chr3.nnic@PLCL2	transcript841.chr3.nnic	protein_coding	16884265,16884822,17009674,17014708,17042874,17067956,17089733	16884536,16885366,17012160,17014911,17042949,17068065,17090594	Gene ID= ENSG00000154822.17 TPM= 3.5 Transcript Type= NA
chr3	16884530	17090594	16884530	17090594	+	transcript843.chr3.nnic@PLCL2	transcript843.chr3.nnic	protein_coding	16884530,16884822,17009674,17014708,17042874,17067956,17089733	16884638,16885366,17012160,17014911,17042949,17068065,17090594	Gene ID= ENSG00000154822.17 TPM= 2.34 Transcript Type= NA
chr3	16884959	17090594	16884959	17090594	+	ENST00000615277.4@PLCL2	ENST00000615277.4	protein_coding	16884959,17009674,17014708,17042874,17067956,17089733	16885366,17012160,17014911,17042949,17068065,17090594	Gene ID= ENSG00000154822.17 TPM= 33.86 Transcript Type= protein_coding
chr3	17157162	17742623	17157162	17742623	-	transcript854.chr3.nic@TBC1D5	transcript854.chr3.nic	protein_coding	17742481,17623849,17508474,17428450,17406418,17404872,17404694,17403181,17383913,17376525,17374629,17374471,17372075,17307992,17291895,17258506,17238163,17214207,17185109,17167749,17166767,17157162	17742623,17623913,17508605,17428519,17406526,17404961,17404768,17403248,17384015,17376613,17374679,17374540,17372247,17308134,17292001,17258591,17238419,17214370,17185208,17167828,17166928,17161256	Gene ID= ENSG00000131374.14 TPM= 37.95 Transcript Type= NA
chr3	17733499	17737836	17733499	17737836	+	transcript862.chr3.nnic@NA	transcript862.chr3.nnic	NA	17733499	17737836	Gene ID= novel_gene_chr3_863 TPM= 2.34 Transcript Type= NA
chr3	18345387	18425337	18345387	18425337	-	ENST00000338745.10@SATB1	ENST00000338745.10	protein_coding	18423627,18420757,18416902,18416007,18415111,18397179,18394462,18386399,18378170,18351992,18345387	18425337,18420991,18417078,18416133,18415234,18397290,18394916,18386611,18378325,18352195,18349682	Gene ID= ENSG00000182568.16 TPM= 22.18 Transcript Type= protein_coding
chr3	19947079	19985175	19947079	19985175	+	ENST00000273047.8@RAB5A	ENST00000273047.8	protein_coding	19947079,19950806,19975601,19976047,19978310,19983708	19947521,19951061,19975752,19976169,19978403,19985175	Gene ID= ENSG00000144566.10 TPM= 101.58 Transcript Type= protein_coding
chr3	19951703	19957991	19951703	19957991	-	transcript888.chr3.nnic@NA	transcript888.chr3.nnic	NA	19951703	19957991	Gene ID= novel_gene_chr3_889 TPM= 23.35 Transcript Type= NA
chr3	19956948	19959088	19956948	19959088	-	transcript890.chr3.nnic@NA	transcript890.chr3.nnic	NA	19956948	19959088	Gene ID= novel_gene_chr3_891 TPM= 3.5 Transcript Type= NA
chr3	20040023	20154404	20040023	20154404	+	ENST00000263754.4@KAT2B	ENST00000263754.4	protein_coding	20040023,20072333,20095263,20099862,20101287,20111596,20114882,20119598,20122668,20125905,20127423,20136942,20140221,20146316,20147963,20148243,20148403,20152332	20040780,20072459,20095408,20099954,20101468,20111787,20114988,20119723,20122804,20126113,20127549,20137052,20140364,20146430,20147999,20148306,20148487,20154404	Gene ID= ENSG00000114166.7 TPM= 25.69 Transcript Type= protein_coding
chr3	20040257	20149520	20040257	20149520	+	transcript897.chr3.nic@KAT2B	transcript897.chr3.nic	protein_coding	20040257,20072333,20095263,20099862,20111596,20114882,20119598,20122668,20125905,20127423,20136942,20140221,20146316,20147963	20040780,20072459,20095408,20101468,20111787,20114988,20119723,20122804,20126113,20127549,20137052,20140364,20146430,20149520	Gene ID= ENSG00000114166.7 TPM= 2.34 Transcript Type= NA
chr3	20170053	20186292	20170053	20186292	-	ENST00000412997.5@SGO1	ENST00000412997.5	protein_coding	20185948,20183886,20183608,20178271,20176601,20174249,20171043,20170053	20186292,20184034,20183804,20178347,20176659,20175055,20171232,20170815	Gene ID= ENSG00000129810.14 TPM= 1.17 Transcript Type= protein_coding
chr3	23236485	23239439	23236485	23239439	-	transcript900.chr3.nnic@NA	transcript900.chr3.nnic	NA	23236485	23239439	Gene ID= novel_gene_chr3_901 TPM= 2.34 Transcript Type= NA
chr3	23504914	23508113	23504914	23508113	-	transcript904.chr3.nnic@NA	transcript904.chr3.nnic	NA	23504914	23508113	Gene ID= novel_gene_chr3_905 TPM= 5.84 Transcript Type= NA
chr3	23805903	23891316	23805903	23891316	+	ENST00000306627.7@UBE2E1	ENST00000306627.7	protein_coding	23805903,23807237,23811460,23887567,23889112,23890509	23806088,23807421,23811510,23887699,23889259,23891316	Gene ID= ENSG00000170142.11 TPM= 5.84 Transcript Type= protein_coding
chr3	23892281	23917022	23892281	23917022	-	transcript918.chr3.nic@NKIRAS1	transcript918.chr3.nic	protein_coding	23916861,23911329,23910811,23900808,23892281	23917022,23911446,23910921,23901049,23893337	Gene ID= ENSG00000197885.10 TPM= 2.34 Transcript Type= NA
chr3	23892081	23917065	23892081	23917065	-	ENST00000425478.6@NKIRAS1	ENST00000425478.6	protein_coding	23916784,23911329,23910811,23900808,23892081	23917065,23911450,23910921,23901049,23893337	Gene ID= ENSG00000197885.10 TPM= 4.67 Transcript Type= protein_coding
chr3	23892310	23916924	23892310	23916924	-	ENST00000415901.6@NKIRAS1	ENST00000415901.6	protein_coding	23916784,23911329,23910811,23900804,23892310	23916924,23911450,23910921,23901049,23893333	Gene ID= ENSG00000197885.10 TPM= 2.34 Transcript Type= protein_coding
chr3	23892307	23916963	23892307	23916963	-	ENST00000412028.5@NKIRAS1	ENST00000412028.5	protein_coding	23916861,23911329,23910811,23900804,23892307	23916963,23911446,23910921,23901049,23893333	Gene ID= ENSG00000197885.10 TPM= 1.17 Transcript Type= protein_coding
chr3	23917131	23920820	23917131	23920820	+	ENST00000413699.5@RPL15	ENST00000413699.5	protein_coding	23917131,23917850,23918440,23919196	23917239,23918031,23918576,23920820	Gene ID= ENSG00000174748.18 TPM= 23.74 Transcript Type= protein_coding
chr3	23916804	23920856	23916804	23920856	+	ENST00000611050.4@RPL15	ENST00000611050.4	protein_coding	23916804,23917837,23918440,23919196	23917173,23918031,23918576,23920856	Gene ID= ENSG00000174748.18 TPM= 68.11 Transcript Type= protein_coding
chr3	23917148	23919791	23917148	23919791	+	ENST00000435882.5@RPL15	ENST00000435882.5	protein_coding	23917148,23917850,23918440,23919196	23917295,23918031,23918576,23919791	Gene ID= ENSG00000174748.18 TPM= 14.4 Transcript Type= protein_coding
chr3	23945260	23980618	23945260	23980618	+	ENST00000312521.8@NR1D2	ENST00000312521.8	protein_coding	23945260,23954537,23956037,23959671,23961977,23964977,23967813,23977223	23945594,23954803,23956125,23959815,23962605,23965162,23968023,23980618	Gene ID= ENSG00000174738.12 TPM= 113.26 Transcript Type= protein_coding
chr3	24101859	24104292	24101859	24104292	-	transcript955.chr3.nnic@NA	transcript955.chr3.nnic	NA	24101859	24104292	Gene ID= novel_gene_chr3_956 TPM= 2.34 Transcript Type= NA
chr3	24118974	24495021	24118974	24495021	-	transcript958.chr3.nic@THRB	transcript958.chr3.nic	protein_coding	24494795,24337300,24228938,24190074,24152390,24146675,24143501,24133316,24127499,24118974	24495021,24337371,24229001,24190334,24152490,24146822,24143706,24133462,24127757,24123125	Gene ID= ENSG00000151090.17 TPM= 3.5 Transcript Type= NA
chr3	25428311	25597932	25428311	25597932	+	ENST00000330688.8@RARB	ENST00000330688.8	protein_coding	25428311,25461193,25501182,25569758,25580546,25593503,25594520,25596420	25428888,25461341,25501323,25569918,25580722,25593707,25594678,25597932	Gene ID= ENSG00000077092.18 TPM= 12.84 Transcript Type= protein_coding
chr3	25597986	25664945	25597986	25664945	-	transcript969.chr3.nic@TOP2B	transcript969.chr3.nic	protein_coding	25664229,25645300,25643694,25642322,25638165,25637215,25635936,25633841,25632693,25632446,25630801,25630312,25630029,25629035,25628847,25627187,25626772,25626560,25624682,25624297,25623515,25620682,25619862,25618654,25615431,25615205,25612515,25609568,25609183,25607171,25606043,25604760,25601100,25599435,25597986	25664945,25645455,25643784,25642385,25638310,25637312,25636148,25634014,25632794,25632583,25630939,25630469,25630154,25629145,25628952,25627296,25626864,25626674,25624803,25624445,25623746,25620816,25620062,25618849,25615586,25615288,25612709,25609712,25609344,25607375,25606122,25604870,25601225,25599529,25598477	Gene ID= ENSG00000077097.15 TPM= 23.35 Transcript Type= NA
chr3	25718945	25783498	25718945	25783498	-	ENST00000428257.5@NGLY1	ENST00000428257.5	protein_coding	25783260,25778574,25764066,25751098,25739577,25737334,25736309,25733872,25732319,25729133,25720014,25718945	25783498,25778688,25764311,25751263,25739799,25737455,25736400,25733982,25732483,25729318,25720191,25719635	Gene ID= ENSG00000151092.16 TPM= 2.34 Transcript Type= protein_coding
chr3	25719113	25783551	25719113	25783551	-	ENST00000280700.9@NGLY1	ENST00000280700.9	protein_coding	25783260,25778574,25764066,25751098,25739577,25737334,25736004,25733872,25732319,25729133,25720014,25719113	25783551,25778688,25764311,25751263,25739799,25737455,25736149,25733982,25732483,25729318,25720191,25719635	Gene ID= ENSG00000151092.16 TPM= 1.17 Transcript Type= protein_coding
chr3	25718945	25783421	25718945	25783421	-	transcript982.chr3.nic@NGLY1	transcript982.chr3.nic	protein_coding	25783260,25778574,25764066,25751098,25739577,25737334,25736004,25733872,25729133,25720014,25718945	25783421,25778688,25764311,25751263,25739799,25737455,25736149,25733982,25729318,25720191,25719635	Gene ID= ENSG00000151092.16 TPM= 2.34 Transcript Type= NA
chr3	25734895	25783482	25734895	25783482	-	transcript989.chr3.nic@NGLY1	transcript989.chr3.nic	protein_coding	25783260,25778574,25764066,25751098,25739577,25737334,25734895	25783482,25778688,25764311,25751263,25739799,25737455,25736149	Gene ID= ENSG00000151092.16 TPM= 2.34 Transcript Type= NA
chr3	25737545	25783401	25737545	25783401	-	transcript990.chr3.nic@NGLY1	transcript990.chr3.nic	protein_coding	25783260,25778574,25764066,25751098,25737545	25783401,25778688,25764311,25751263,25739799	Gene ID= ENSG00000151092.16 TPM= 2.34 Transcript Type= NA
chr3	25719271	25783438	25719271	25783438	-	ENST00000396649.7@NGLY1	ENST00000396649.7	protein_coding	25783260,25778574,25764066,25751098,25739577,25737334,25736004,25733872,25732319,25729133,25719271	25783438,25778688,25764311,25751263,25739799,25737455,25736149,25733982,25732483,25729318,25719635	Gene ID= ENSG00000151092.16 TPM= 7.01 Transcript Type= protein_coding
chr3	25719276	25783381	25719276	25783381	-	ENST00000308710.9@NGLY1	ENST00000308710.9	protein_coding	25783260,25778574,25764066,25751098,25739577,25737334,25736309,25733872,25732319,25729133,25720014,25719276	25783381,25778688,25764311,25751263,25739799,25737455,25736400,25733982,25732483,25729318,25720191,25719635	Gene ID= ENSG00000151092.16 TPM= 2.34 Transcript Type= protein_coding
chr3	25790080	25794534	25790080	25794534	+	ENST00000280701.7@OXSM	ENST00000280701.7	protein_coding	25790080,25790990,25794092	25790147,25791997,25794534	Gene ID= ENSG00000151093.7 TPM= 12.84 Transcript Type= protein_coding
chr3	27385892	27484430	27385892	27484430	-	transcript997.chr3.nic@SLC4A7	transcript997.chr3.nic	protein_coding	27484079,27452417,27448651,27437388,27436388,27433916,27424037,27421622,27420700,27418486,27411642,27409356,27404830,27403139,27400764,27398192,27397684,27394954,27394518,27391740,27389931,27385892	27484430,27452498,27448797,27437526,27436548,27434104,27424152,27421779,27420787,27418632,27411748,27409530,27404963,27403384,27400869,27398353,27397797,27395115,27394769,27391808,27390104,27386023	Gene ID= ENSG00000033867.16 TPM= 4.67 Transcript Type= NA
chr3	27715949	27722498	27715949	27722498	-	ENST00000295743.8@EOMES	ENST00000295743.8	protein_coding	27721414,27720171,27719360,27718735,27718587,27715949	27722498,27720325,27719481,27718893,27718648,27717751	Gene ID= ENSG00000163508.12 TPM= 1.17 Transcript Type= protein_coding
chr3	27716377	27722312	27716377	27722312	-	ENST00000449599.3@EOMES	ENST00000449599.3	protein_coding	27721414,27720171,27719360,27718735,27718587,27716377	27722312,27720325,27719481,27718893,27718648,27717808	Gene ID= ENSG00000163508.12 TPM= 3.5 Transcript Type= protein_coding
chr3	28241584	28319762	28241584	28319762	+	ENST00000477739.1@CMC1	ENST00000477739.1	protein_coding	28241584,28263291,28316333	28241812,28263380,28319762	Gene ID= ENSG00000187118.12 TPM= 2.34 Transcript Type= retained_intron
chr3	28241618	28319771	28241618	28319771	+	ENST00000423894.5@CMC1	ENST00000423894.5	protein_coding	28241618,28316333,28319509	28241812,28316423,28319771	Gene ID= ENSG00000187118.12 TPM= 5.84 Transcript Type= protein_coding
chr3	28246800	28248762	28246800	28248762	-	transcript1008.chr3.nnic@NA	transcript1008.chr3.nnic	NA	28246800	28248762	Gene ID= novel_gene_chr3_1009 TPM= 7.01 Transcript Type= NA
chr3	28321047	28349127	28321047	28349127	-	ENST00000479665.5@AZI2	ENST00000479665.5	protein_coding	28348601,28340402,28338493,28337937,28336737,28332369,28326832,28321047	28349127,28340622,28338615,28338036,28336885,28332427,28326950,28324454	Gene ID= ENSG00000163512.13 TPM= 21.02 Transcript Type= protein_coding
chr3	28322353	28348790	28322353	28348790	-	ENST00000295748.7@AZI2	ENST00000295748.7	protein_coding	28348601,28341512,28340402,28338493,28337937,28336737,28332369,28326832,28322353	28348790,28341596,28340601,28338615,28338036,28336885,28332427,28326950,28324454	Gene ID= ENSG00000163512.13 TPM= 2.34 Transcript Type= processed_transcript
chr3	28331691	28349050	28331691	28349050	-	ENST00000420543.6@AZI2	ENST00000420543.6	protein_coding	28348601,28340402,28338493,28337937,28336737,28332369,28331691	28349050,28340622,28338615,28338036,28336885,28332427,28331954	Gene ID= ENSG00000163512.13 TPM= 16.35 Transcript Type= protein_coding
chr3	28349158	28524664	28349158	28524664	+	transcript1010.chr3.nic@ZCWPW2	transcript1010.chr3.nic	protein_coding	28349158,28413056,28435110,28478814,28492127,28514064,28515554,28520992,28524527	28349203,28413400,28435269,28478931,28492173,28514122,28515621,28521116,28524664	Gene ID= ENSG00000206559.7 TPM= 3.5 Transcript Type= NA
chr3	29280982	30010391	29280982	30010391	+	ENST00000434693.6@RBMS3	ENST00000434693.6	protein_coding	29280982,29434746,29488441,29587114,29739720,29762910,29868858,29884162,29897379,29899705,29936086,29944207,29988143,29991082,30003856	29281756,29434915,29488499,29587205,29739877,29762989,29868964,29884208,29897475,29899755,29936196,29944254,29988223,29991209,30010391	Gene ID= ENSG00000144642.21 TPM= 138.94 Transcript Type= protein_coding
chr3	30606502	30694134	30606502	30694134	+	ENST00000295754.9@TGFBR2	ENST00000295754.9	protein_coding	30606502,30644747,30650270,30671638,30674105,30688384,30691420	30606977,30644915,30650460,30672437,30674246,30688511,30694134	Gene ID= ENSG00000163513.17 TPM= 391.53 Transcript Type= protein_coding
chr3	30606601	30694142	30606601	30694142	+	ENST00000359013.4@TGFBR2	ENST00000359013.4	protein_coding	30606601,30623199,30644747,30650270,30671638,30674105,30688384,30691420	30606977,30623273,30644915,30650460,30672437,30674246,30688511,30694142	Gene ID= ENSG00000163513.17 TPM= 121.82 Transcript Type= protein_coding
chr3	30611584	30616245	30611584	30616245	-	transcript1068.chr3.nnic@NA	transcript1068.chr3.nnic	NA	30611584	30616245	Gene ID= novel_gene_chr3_1069 TPM= 16.35 Transcript Type= NA
chr3	30653252	30657018	30653252	30657018	-	transcript1070.chr3.nnic@NA	transcript1070.chr3.nnic	NA	30653252	30657018	Gene ID= novel_gene_chr3_1071 TPM= 10.51 Transcript Type= NA
chr3	30681040	30684453	30681040	30684453	-	transcript1076.chr3.nnic@NA	transcript1076.chr3.nnic	NA	30681040	30684453	Gene ID= novel_gene_chr3_1077 TPM= 3.5 Transcript Type= NA
chr3	31532790	31637622	31532790	31637622	+	ENST00000295770.3@STT3B	ENST00000295770.3	protein_coding	31532790,31576396,31579809,31596798,31600360,31615105,31616929,31617940,31619676,31622097,31623674,31624914,31625954,31629298,31632935,31635984	31533312,31576504,31580096,31596863,31600459,31615203,31617075,31617988,31619830,31622308,31623861,31625085,31626127,31629411,31633147,31637622	Gene ID= ENSG00000163527.9 TPM= 194.99 Transcript Type= protein_coding
chr3	31532972	31620274	31532972	31620274	+	ENST00000423527.5@STT3B	ENST00000423527.5	protein_coding	31532972,31576396,31579809,31596798,31600360,31615105,31616929,31617940,31619676,31619965	31533312,31576504,31580096,31596863,31600459,31615203,31617075,31617988,31619830,31620274	Gene ID= ENSG00000163527.9 TPM= 4.67 Transcript Type= processed_transcript
chr3	31646304	31652195	31646304	31652195	-	transcript1107.chr3.nnic@NA	transcript1107.chr3.nnic	NA	31646304	31652195	Gene ID= novel_gene_chr3_1108 TPM= 2.34 Transcript Type= NA
chr3	31660825	31981305	31660825	31981305	-	transcript1111.chr3.nic@OSBPL10	transcript1111.chr3.nic	protein_coding	31980899,31876433,31830040,31747910,31733257,31702359,31683634,31670797,31668642,31664079,31660825	31981305,31876512,31830231,31748120,31733411,31702508,31684114,31670983,31668824,31664232,31662116	Gene ID= ENSG00000144645.13 TPM= 4.67 Transcript Type= NA
chr3	31657890	31981302	31657890	31981302	-	ENST00000396556.6@OSBPL10	ENST00000396556.6	protein_coding	31980899,31879655,31876433,31830040,31747910,31733257,31702359,31683634,31670797,31668642,31664079,31657890	31981302,31879830,31876512,31830231,31748120,31733411,31702508,31684114,31670983,31668824,31664232,31662116	Gene ID= ENSG00000144645.13 TPM= 4.67 Transcript Type= protein_coding
chr3	32106511	32168713	32106511	32168713	+	ENST00000282541.9@GPD1L	ENST00000282541.9	protein_coding	32106511,32128076,32138587,32140228,32146622,32158876,32159568,32165814	32106758,32128253,32138727,32140366,32146734,32159109,32159674,32168713	Gene ID= ENSG00000152642.10 TPM= 125.52 Transcript Type= protein_coding
chr3	32236688	32238578	32236688	32238578	-	ENST00000565519.1@AC097639.1	ENST00000565519.1	sense_intronic	32236688	32238578	Gene ID= ENSG00000261572.1 TPM= 1.17 Transcript Type= sense_intronic
chr3	32238679	32370321	32238679	32370321	+	ENST00000458535.6@CMTM8	ENST00000458535.6	protein_coding	32238679,32367872,32369884	32239119,32367988,32370321	Gene ID= ENSG00000170293.8 TPM= 2.34 Transcript Type= protein_coding
chr3	32238679	32370325	32238679	32370325	+	ENST00000307526.3@CMTM8	ENST00000307526.3	protein_coding	32238679,32357373,32367872,32369884	32239119,32357546,32367988,32370325	Gene ID= ENSG00000170293.8 TPM= 39.7 Transcript Type= protein_coding
chr3	32323192	32327126	32323192	32327126	+	transcript1138.chr3.nnic@NA	transcript1138.chr3.nnic	NA	32323192	32327126	Gene ID= novel_gene_chr3_1139 TPM= 2.34 Transcript Type= NA
chr3	32391671	32455528	32391671	32455528	+	ENST00000334983.9@CMTM7	ENST00000334983.9	protein_coding	32391671,32441840,32449454,32452392,32454241	32392065,32442013,32449552,32452473,32455528	Gene ID= ENSG00000153551.13 TPM= 89.9 Transcript Type= protein_coding
chr3	32481312	32503408	32481312	32503408	-	ENST00000205636.3@CMTM6	ENST00000205636.3	protein_coding	32502608,32491710,32487938,32481312	32503408,32491886,32488036,32484097	Gene ID= ENSG00000091317.7 TPM= 133.11 Transcript Type= protein_coding
chr3	32525971	32570874	32525971	32570874	-	ENST00000273130.8@DYNC1LI1	ENST00000273130.8	protein_coding	32570625,32570346,32545849,32544876,32541037,32537011,32534511,32532986,32530461,32530284,32529540,32528446,32525971	32570874,32570419,32545965,32545106,32541206,32537104,32534646,32533097,32530520,32530328,32529660,32528601,32526908	Gene ID= ENSG00000144635.8 TPM= 47.87 Transcript Type= protein_coding
chr3	32570192	32572515	32570192	32572515	+	transcript1163.chr3.nnic@NA	transcript1163.chr3.nnic	NA	32570192	32572515	Gene ID= novel_gene_chr3_1164 TPM= 4.67 Transcript Type= NA
chr3	32685204	32710169	32685204	32710169	+	transcript1175.chr3.nic@CNOT10	transcript1175.chr3.nic	protein_coding	32685204,32703868,32704811,32708670	32685482,32703962,32704972,32710169	Gene ID= ENSG00000182973.18 TPM= 2.34 Transcript Type= NA
chr3	32685145	32773875	32685145	32773875	+	ENST00000328834.9@CNOT10	ENST00000328834.9	protein_coding	32685145,32703868,32704811,32708670,32713227,32716225,32717154,32720114,32725450,32727668,32733423,32734800,32737410,32759458,32762733,32764455,32764682,32769887,32773457	32685482,32703962,32704972,32708820,32713369,32716311,32717237,32720231,32725599,32727870,32733544,32734976,32737490,32759571,32762863,32764490,32764809,32769962,32773875	Gene ID= ENSG00000182973.18 TPM= 9.34 Transcript Type= protein_coding
chr3	32818018	32897826	32818018	32897826	+	ENST00000383763.5@TRIM71	ENST00000383763.5	protein_coding	32818018,32873818,32885934,32890360	32818932,32873985,32886068,32897826	Gene ID= ENSG00000206557.5 TPM= 2.34 Transcript Type= protein_coding
chr3	32847192	32851624	32847192	32851624	-	transcript1177.chr3.nnic@NA	transcript1177.chr3.nnic	NA	32847192	32851624	Gene ID= novel_gene_chr3_1178 TPM= 2.34 Transcript Type= NA
chr3	32996729	33097156	32996729	33097156	-	transcript1182.chr3.nic@GLB1	transcript1182.chr3.nic	protein_coding	33097011,33077094,33072544,33068820,33068230,33065463,33058089,33053491,33051883,33051758,33046120,33024251,33021566,33018448,33016709,33014056,32996729	33097156,33077237,33072713,33068970,33068290,33065557,33058269,33053549,33052004,33051798,33046232,33024325,33021655,33018561,33016840,33014310,32997344	Gene ID= ENSG00000170266.15 TPM= 8.17 Transcript Type= NA
chr3	32996608	33097230	32996608	33097230	-	ENST00000307363.9@GLB1	ENST00000307363.9	protein_coding	33097011,33072544,33068820,33068230,33065463,33058089,33053491,33051883,33051758,33046120,33024251,33021566,33018448,33016709,33014056,32996608	33097230,33072713,33068970,33068290,33065557,33058269,33053549,33052004,33051798,33046232,33024325,33021655,33018561,33016840,33014310,32997344	Gene ID= ENSG00000170266.15 TPM= 12.84 Transcript Type= protein_coding
chr3	32996609	33096835	32996609	33096835	-	ENST00000399402.7@GLB1	ENST00000399402.7	protein_coding	33096719,33072544,33068820,33068230,33065463,33058089,33053491,33051883,33051758,33046120,33024251,33021566,33018448,33016709,33014056,32996609	33096835,33072713,33068970,33068290,33065557,33058269,33053549,33052004,33051798,33046232,33024325,33021655,33018561,33016840,33014310,32997344	Gene ID= ENSG00000170266.15 TPM= 2.34 Transcript Type= protein_coding
chr3	33083558	33087192	33083558	33087192	-	transcript1193.chr3.nnic@NA	transcript1193.chr3.nnic	NA	33083558	33087192	Gene ID= novel_gene_chr3_1194 TPM= 9.34 Transcript Type= NA
chr3	33089757	33095233	33089757	33095233	+	transcript1191.chr3.nnic@NA	transcript1191.chr3.nnic	NA	33089757	33095233	Gene ID= novel_gene_chr3_1192 TPM= 18.68 Transcript Type= NA
chr3	33113979	33147773	33113979	33147773	+	ENST00000320954.10@CRTAP	ENST00000320954.10	protein_coding	33113979,33120344,33124408,33129939,33132555,33134182,33142395	33114548,33120493,33124579,33130067,33132700,33134265,33147773	Gene ID= ENSG00000170275.14 TPM= 23.35 Transcript Type= protein_coding
chr3	33114054	33143158	33114054	33143158	+	ENST00000449224.1@CRTAP	ENST00000449224.1	protein_coding	33114054,33120344,33124408,33132555,33134182,33142395	33114548,33120493,33124579,33132700,33134265,33143158	Gene ID= ENSG00000170275.14 TPM= 16.35 Transcript Type= protein_coding
chr3	33150042	33219215	33150042	33219215	-	ENST00000309558.7@SUSD5	ENST00000309558.7	protein_coding	33218686,33213928,33207808,33174886,33150042	33219215,33214105,33207926,33175074,33154033	Gene ID= ENSG00000173705.8 TPM= 3.5 Transcript Type= protein_coding
chr3	33388410	33440405	33388410	33440405	-	transcript1215.chr3.nic@UBP1	transcript1215.chr3.nic	protein_coding	33439736,33425590,33416758,33412722,33411581,33409449,33409236,33402801,33400962,33400189,33397045,33396745,33396162,33393312,33392563,33388410	33440405,33425741,33416834,33412827,33411687,33409601,33409346,33402904,33401016,33400282,33397135,33396878,33396280,33393454,33392614,33390368	Gene ID= ENSG00000153560.11 TPM= 4.67 Transcript Type= NA
chr3	33388336	33440375	33388336	33440375	-	transcript1224.chr3.nic@UBP1	transcript1224.chr3.nic	protein_coding	33439736,33425590,33416758,33412722,33411581,33409449,33409236,33408690,33402801,33400962,33400189,33396162,33393312,33392563,33388336	33440375,33425741,33416834,33412827,33411687,33409601,33409346,33408797,33402904,33401016,33400282,33397135,33393454,33392614,33390368	Gene ID= ENSG00000153560.11 TPM= 5.06 Transcript Type= NA
chr3	33388336	33440378	33388336	33440378	-	ENST00000283629.7@UBP1	ENST00000283629.7	protein_coding	33439736,33425590,33416758,33412722,33411581,33409449,33409236,33408690,33402801,33400962,33400189,33397045,33396162,33393312,33392563,33388336	33440378,33425741,33416834,33412827,33411687,33409601,33409346,33408797,33402904,33401016,33400282,33397135,33396280,33393454,33392614,33390368	Gene ID= ENSG00000153560.11 TPM= 14.4 Transcript Type= protein_coding
chr3	33388339	33440010	33388339	33440010	-	ENST00000447368.6@UBP1	ENST00000447368.6	protein_coding	33439736,33425590,33416758,33412722,33411581,33409449,33409236,33402801,33400962,33400189,33397045,33396162,33393312,33392563,33388339	33440010,33425741,33416834,33412827,33411687,33409601,33409346,33402904,33401016,33400282,33397135,33396280,33393454,33392614,33390368	Gene ID= ENSG00000153560.11 TPM= 5.06 Transcript Type= protein_coding
chr3	33496245	33718356	33496245	33718356	-	ENST00000399362.8@CLASP2	ENST00000399362.8	protein_coding	33717808,33696855,33689829,33688277,33687060,33684359,33663445,33644757,33632292,33626988,33622135,33619603,33612001,33608567,33607384,33606591,33604154,33602952,33596711,33594951,33592395,33584750,33581821,33576169,33574473,33573110,33570727,33560808,33559307,33551252,33544698,33543433,33538789,33535233,33516981,33516023,33510558,33501652,33496245	33718356,33696933,33689932,33688368,33687135,33684456,33663515,33644903,33632371,33627080,33622280,33619738,33612071,33608626,33607461,33606758,33604209,33603125,33596734,33594968,33592496,33584920,33581928,33576275,33574496,33573354,33570790,33560971,33559385,33551395,33544841,33543539,33538942,33535461,33517174,33516151,33510764,33501768,33498717	Gene ID= ENSG00000163539.16 TPM= 1.17 Transcript Type= protein_coding
chr3	33496993	33718254	33496993	33718254	-	transcript1230.chr3.nnic@CLASP2	transcript1230.chr3.nnic	protein_coding	33717808,33696855,33689829,33688277,33687060,33684359,33663445,33644757,33632292,33626988,33622135,33619603,33612001,33608567,33607384,33606591,33604154,33602952,33592395,33584750,33581821,33576169,33574473,33573110,33570727,33560808,33559307,33559125,33551252,33544698,33543433,33538789,33535233,33516981,33516023,33510558,33501652,33496993	33718254,33696933,33689932,33688368,33687135,33684456,33663515,33644903,33632371,33627080,33622280,33619738,33612071,33608626,33607461,33606758,33604209,33603125,33592496,33584920,33581928,33576275,33574496,33573354,33570790,33560971,33559385,33559175,33551395,33544841,33543539,33538942,33535461,33517174,33516151,33510764,33501768,33498717	Gene ID= ENSG00000163539.16 TPM= 2.34 Transcript Type= NA
chr3	33496993	33718254	33496993	33718254	-	transcript1232.chr3.nnic@CLASP2	transcript1232.chr3.nnic	protein_coding	33717808,33696855,33689829,33688277,33687060,33684359,33663445,33644757,33632292,33626988,33622135,33619603,33612001,33608567,33607384,33606591,33604154,33602952,33592395,33584750,33581821,33576169,33574473,33573110,33570727,33560808,33559307,33551252,33544698,33543433,33538789,33535233,33516981,33516023,33510558,33501652,33496993	33718254,33696933,33689932,33688368,33687135,33684456,33663515,33644903,33632371,33627080,33622280,33619738,33612071,33608626,33607461,33606758,33604209,33603125,33592496,33584920,33581928,33576275,33574496,33573354,33570790,33560971,33559385,33551395,33544841,33543539,33538942,33535461,33517174,33516151,33510764,33501768,33498717	Gene ID= ENSG00000163539.16 TPM= 14.01 Transcript Type= NA
chr3	33497755	33659118	33497755	33659118	-	transcript1236.chr3.nnic@CLASP2	transcript1236.chr3.nnic	protein_coding	33658974,33644757,33632292,33626988,33622135,33619603,33612001,33608567,33607384,33606591,33604154,33602952,33592395,33584750,33581821,33576169,33573110,33570727,33563964,33560808,33559307,33559125,33551252,33544698,33543433,33538789,33535233,33516981,33516023,33510558,33501652,33497755	33659118,33644903,33632371,33627080,33622280,33619738,33612071,33608626,33607461,33606758,33604209,33603125,33592496,33584920,33581928,33576275,33573354,33570790,33563966,33560971,33559385,33559175,33551395,33544841,33543539,33538942,33535461,33517174,33516151,33510764,33501768,33498717	Gene ID= ENSG00000163539.16 TPM= 3.5 Transcript Type= NA
chr3	33496993	33659118	33496993	33659118	-	transcript1237.chr3.nnic@CLASP2	transcript1237.chr3.nnic	protein_coding	33658974,33644757,33632292,33626988,33622135,33619603,33612001,33608567,33607384,33606591,33604154,33602952,33592395,33584750,33581821,33576169,33573110,33570727,33563964,33560808,33559307,33551252,33544698,33543433,33538789,33535233,33516981,33516023,33510558,33501652,33496993	33659118,33644903,33632371,33627080,33622280,33619738,33612071,33608626,33607461,33606758,33604209,33603125,33592496,33584920,33581928,33576275,33573354,33570790,33563966,33560971,33559385,33551395,33544841,33543539,33538942,33535461,33517174,33516151,33510764,33501768,33498717	Gene ID= ENSG00000163539.16 TPM= 4.67 Transcript Type= NA
chr3	33681688	33718254	33681688	33718254	-	transcript1243.chr3.nic@CLASP2	transcript1243.chr3.nic	protein_coding	33717808,33696855,33689829,33688277,33687060,33684359,33681688	33718254,33696933,33689932,33688368,33687135,33684456,33683604	Gene ID= ENSG00000163539.16 TPM= 2.34 Transcript Type= NA
chr3	33795686	33798987	33795686	33798987	-	transcript1262.chr3.nnic@NA	transcript1262.chr3.nnic	NA	33795686	33798987	Gene ID= novel_gene_chr3_1263 TPM= 2.34 Transcript Type= NA
chr3	33795688	33796950	33795688	33796950	-	ENST00000604982.1@AC112220.4	ENST00000604982.1	lincRNA	33795688	33796950	Gene ID= ENSG00000271643.1 TPM= 1.17 Transcript Type= lincRNA
chr3	33798571	33869707	33798571	33869707	+	ENST00000457054.6@PDCD6IP	ENST00000457054.6	protein_coding	33798571,33812072,33813559,33821955,33825187,33826480,33828838,33836044,33838204,33841897,33844112,33845419,33852488,33853879,33855166,33864006,33865243,33866351	33798937,33812126,33813628,33822082,33825340,33826580,33828969,33836266,33838327,33842074,33844223,33845588,33852736,33854013,33855260,33864129,33865430,33869707	Gene ID= ENSG00000170248.13 TPM= 8.56 Transcript Type= protein_coding
chr3	33798352	33869702	33798352	33869702	+	ENST00000307296.7@PDCD6IP	ENST00000307296.7	protein_coding	33798352,33812072,33813559,33821955,33825187,33826480,33828853,33836044,33838204,33841897,33844112,33845419,33852488,33853879,33855166,33864006,33865243,33866351	33798937,33812126,33813628,33822082,33825340,33826580,33828969,33836266,33838327,33842074,33844223,33845588,33852736,33854013,33855260,33864129,33865430,33869702	Gene ID= ENSG00000170248.13 TPM= 15.56 Transcript Type= protein_coding
chr3	33798571	33867006	33798571	33867006	+	transcript1255.chr3.nic@PDCD6IP	transcript1255.chr3.nic	protein_coding	33798571,33812072,33813559,33821955,33825187,33826480,33836044,33838204,33841897,33844112,33845419,33852488,33853879,33855166,33864006,33865243,33866351	33798937,33812126,33813628,33822082,33825340,33828969,33836266,33838327,33842074,33844223,33845588,33852736,33854013,33855260,33864129,33865430,33867006	Gene ID= ENSG00000170248.13 TPM= 5.06 Transcript Type= NA
chr3	33798571	33827261	33798571	33827261	+	transcript1260.chr3.nnic@PDCD6IP	transcript1260.chr3.nnic	protein_coding	33798571,33812072,33813559,33821955,33825187,33826480,33826970	33798937,33812126,33813628,33822082,33825340,33826580,33827261	Gene ID= ENSG00000170248.13 TPM= 4.67 Transcript Type= NA
chr3	34255802	34257597	34255802	34257597	-	transcript1264.chr3.nnic@NA	transcript1264.chr3.nnic	NA	34255802	34257597	Gene ID= novel_gene_chr3_1265 TPM= 5.84 Transcript Type= NA
chr3	34668137	34678516	34668137	34678516	+	transcript1266.chr3.nnic@NA	transcript1266.chr3.nnic	NA	34668137,34669211,34676426	34668255,34669333,34678516	Gene ID= novel_gene_chr3_1267 TPM= 3.5 Transcript Type= NA
chr3	36380452	36547501	36380452	36547501	+	transcript1271.chr3.nnic@STAC	transcript1271.chr3.nnic	protein_coding	36380452,36386593,36443364,36482992,36484977,36486134,36493151,36504393,36505746,36528696,36528848,36546191	36380754,36386638,36443640,36483092,36485058,36486249,36493229,36504457,36505834,36528747,36528985,36547501	Gene ID= ENSG00000144681.10 TPM= 2.34 Transcript Type= NA
chr3	36380508	36533428	36380508	36533428	+	transcript1273.chr3.nnic@STAC	transcript1273.chr3.nnic	protein_coding	36380508,36443364,36482992,36484977,36486134,36493151,36504393,36505746,36528696,36528848,36533246	36380754,36443640,36483092,36485058,36486249,36493229,36504457,36505834,36528747,36528985,36533428	Gene ID= ENSG00000144681.10 TPM= 3.5 Transcript Type= NA
chr3	36380466	36548007	36380466	36548007	+	transcript1277.chr3.nic@STAC	transcript1277.chr3.nic	protein_coding	36380466,36443397,36482992,36484977,36486134,36493151,36504393,36505746,36528696,36528848,36546191	36380754,36443640,36483092,36485058,36486249,36493229,36504457,36505834,36528747,36528985,36548007	Gene ID= ENSG00000144681.10 TPM= 4.67 Transcript Type= NA
chr3	36380510	36529056	36380510	36529056	+	transcript1278.chr3.nic@STAC	transcript1278.chr3.nic	protein_coding	36380510,36443364,36482992,36484977,36486134,36493151,36504393,36505746,36528696,36528848	36380754,36443640,36483092,36485058,36486249,36493229,36504457,36505834,36528747,36529056	Gene ID= ENSG00000144681.10 TPM= 2.34 Transcript Type= NA
chr3	36380340	36548007	36380340	36548007	+	transcript1284.chr3.nic@STAC	transcript1284.chr3.nic	protein_coding	36380340,36443397,36486134,36493151,36504393,36505746,36528696,36528848,36546191	36380754,36443640,36486249,36493229,36504457,36505834,36528747,36528985,36548007	Gene ID= ENSG00000144681.10 TPM= 2.34 Transcript Type= NA
chr3	36380282	36454900	36380282	36454900	+	transcript1290.chr3.nnic@STAC	transcript1290.chr3.nnic	protein_coding	36380282,36443364,36454269	36380754,36443640,36454900	Gene ID= ENSG00000144681.10 TPM= 2.34 Transcript Type= NA
chr3	36380344	36548007	36380344	36548007	+	ENST00000273183.7@STAC	ENST00000273183.7	protein_coding	36380344,36443364,36482992,36484977,36486134,36493151,36504393,36505746,36528696,36528848,36546191	36380754,36443640,36483092,36485058,36486249,36493229,36504457,36505834,36528747,36528985,36548007	Gene ID= ENSG00000144681.10 TPM= 52.54 Transcript Type= protein_coding
chr3	36826820	36861825	36826820	36861825	-	transcript1291.chr3.nnic@TRANK1	transcript1291.chr3.nnic	protein_coding	36858718,36855173,36852141,36851719,36847200,36846248,36842622,36838613,36838372,36834762,36830873,36829564,36826820	36861825,36858049,36852345,36851851,36847346,36846404,36842710,36838716,36838504,36834907,36833919,36829662,36828375	Gene ID= ENSG00000168016.13 TPM= 53.71 Transcript Type= NA
chr3	36988982	36993166	36988982	36993166	-	transcript1300.chr3.nnic@EPM2AIP1	transcript1300.chr3.nnic	protein_coding	36992318,36988982	36993166,36990435	Gene ID= ENSG00000178567.7 TPM= 3.5 Transcript Type= NA
chr3	36988888	36993170	36988888	36993170	-	transcript1302.chr3.nnic@NA	transcript1302.chr3.nnic	NA	36988888	36993170	Gene ID= novel_gene_chr3_1303 TPM= 7.01 Transcript Type= NA
chr3	36993332	37050918	36993332	37050918	+	ENST00000231790.6@MLH1	ENST00000231790.6	protein_coding	36993332,36996619,37000955,37004401,37006991,37008814,37011820,37012011,37014432,37017506,37020310,37025637,37028784,37040186,37042268,37047519,37048517,37048904,37050486	36993663,36996709,37001053,37004474,37007063,37008905,37011862,37012099,37014544,37017599,37020463,37026007,37028932,37040294,37042331,37047683,37048609,37049017,37050918	Gene ID= ENSG00000076242.14 TPM= 33.86 Transcript Type= protein_coding
chr3	36993784	37050846	36993784	37050846	+	transcript1309.chr3.nic@MLH1	transcript1309.chr3.nic	protein_coding	36993784,36996619,37000955,37004401,37006991,37008814,37011820,37012011,37014432,37017506,37020310,37025637,37028784,37040186,37042268,37047519,37048517,37048904,37050486	36993890,36996709,37001053,37004474,37007063,37008905,37011862,37012099,37014544,37017599,37020463,37026007,37028932,37040294,37042331,37047683,37048609,37049017,37050846	Gene ID= ENSG00000076242.14 TPM= 3.5 Transcript Type= NA
chr3	36993487	37050846	36993487	37050846	+	transcript1311.chr3.nnic@MLH1	transcript1311.chr3.nnic	protein_coding	36993487,36996619,37000955,37004401,37006991,37008814,37011820,37012011,37014432,37017506,37020310,37025637,37028784,37040186,37042268,37047519,37048904,37050486	36993663,36996709,37001053,37004474,37007063,37008905,37011862,37012099,37014544,37017599,37020463,37026007,37028932,37040294,37042331,37047683,37049017,37050846	Gene ID= ENSG00000076242.14 TPM= 2.34 Transcript Type= NA
chr3	36993804	37050844	36993804	37050844	+	ENST00000435176.5@MLH1	ENST00000435176.5	protein_coding	36993804,36996619,37000955,37004401,37006991,37008814,37011820,37012011,37014432,37017506,37020310,37025637,37028784,37040186,37042268,37047519,37048517,37048904,37050486	36993890,36996709,37001048,37004474,37007063,37008905,37011862,37012099,37014544,37017599,37020463,37026007,37028932,37040294,37042331,37047683,37048609,37049017,37050844	Gene ID= ENSG00000076242.14 TPM= 5.84 Transcript Type= protein_coding
chr3	37052656	37176360	37052656	37176360	-	ENST00000354379.8@LRRFIP2	ENST00000354379.8	protein_coding	37176060,37174539,37148894,37129063,37096616,37094792,37083636,37075024,37065810,37063742,37058790,37055086,37054411,37052656	37176360,37174605,37149038,37129149,37096660,37094908,37083806,37075116,37065942,37063791,37058910,37055165,37054515,37053961	Gene ID= ENSG00000093167.17 TPM= 3.5 Transcript Type= protein_coding
chr3	37144943	37176354	37144943	37176354	-	transcript1339.chr3.nnic@LRRFIP2	transcript1339.chr3.nnic	protein_coding	37176060,37174539,37148894,37144943	37176354,37174605,37149038,37146627	Gene ID= ENSG00000093167.17 TPM= 2.34 Transcript Type= NA
chr3	37172791	37176354	37172791	37176354	-	transcript1346.chr3.nnic@LRRFIP2	transcript1346.chr3.nnic	protein_coding	37176060,37174539,37172791	37176354,37174605,37173194	Gene ID= ENSG00000093167.17 TPM= 2.34 Transcript Type= NA
chr3	37053004	37176337	37053004	37176337	-	ENST00000421276.6@LRRFIP2	ENST00000421276.6	protein_coding	37176060,37174539,37148894,37129063,37096616,37094792,37091467,37083636,37075024,37065810,37063742,37058790,37055086,37054411,37053004	37176337,37174605,37149038,37129149,37096660,37094908,37091538,37083806,37075116,37065942,37063791,37058910,37055165,37054515,37053961	Gene ID= ENSG00000093167.17 TPM= 37.36 Transcript Type= protein_coding
chr3	37053750	37176308	37053750	37176308	-	ENST00000440230.5@LRRFIP2	ENST00000440230.5	protein_coding	37175818,37174539,37148894,37129063,37096616,37094792,37091467,37083636,37075024,37065810,37063742,37058790,37055086,37054411,37053750	37176308,37174605,37149038,37129149,37096660,37094908,37091538,37083806,37075116,37065942,37063791,37058910,37055165,37054515,37053961	Gene ID= ENSG00000093167.17 TPM= 2.34 Transcript Type= protein_coding
chr3	37170801	37173207	37170801	37173207	+	transcript1348.chr3.nnic@NA	transcript1348.chr3.nnic	NA	37170801	37173207	Gene ID= novel_gene_chr3_1349 TPM= 2.34 Transcript Type= NA
chr3	37241789	37244177	37241789	37244177	-	ENST00000604992.1@AC097359.2	ENST00000604992.1	antisense_RNA	37241789	37244177	Gene ID= ENSG00000270194.1 TPM= 1.17 Transcript Type= antisense_RNA
chr3	37243252	37366745	37243252	37366745	+	ENST00000356847.8@GOLGA4	ENST00000356847.8	protein_coding	37243252,37251395,37273536,37281958,37286014,37289235,37294979,37296087,37298833,37299288,37302185,37315420,37319063,37321731,37323588,37328416,37328963,37335053,37337666,37340124,37347193,37355101,37366080	37243622,37251484,37273601,37282272,37286061,37289291,37295077,37296219,37299020,37299371,37302332,37315598,37319194,37321886,37327825,37328537,37329093,37335166,37337734,37340199,37347296,37355187,37366745	Gene ID= ENSG00000144674.16 TPM= 13.81 Transcript Type= protein_coding
chr3	37243258	37324750	37243258	37324750	+	transcript1352.chr3.nic@GOLGA4	transcript1352.chr3.nic	protein_coding	37243258,37251395,37273536,37281958,37289235,37294979,37296087,37298833,37299288,37302185,37315420,37319063,37321731,37323588	37243622,37251484,37273601,37282272,37289291,37295077,37296219,37299020,37299371,37302332,37315598,37319194,37321886,37324750	Gene ID= ENSG00000144674.16 TPM= 3.89 Transcript Type= NA
chr3	37243177	37366751	37243177	37366751	+	ENST00000361924.6@GOLGA4	ENST00000361924.6	protein_coding	37243177,37251395,37281958,37286014,37289235,37294979,37296087,37298833,37299288,37302185,37315420,37319063,37321731,37323588,37328416,37328963,37335053,37337143,37337666,37340124,37347193,37355101,37361243,37366080	37243622,37251484,37282272,37286061,37289291,37295077,37296219,37299020,37299371,37302332,37315598,37319194,37321886,37327825,37328537,37329093,37335166,37337163,37337734,37340199,37347296,37355187,37361305,37366751	Gene ID= ENSG00000144674.16 TPM= 6.81 Transcript Type= protein_coding
chr3	37371734	37376162	37371734	37376162	-	transcript1359.chr3.nnic@NA	transcript1359.chr3.nnic	NA	37371734	37376162	Gene ID= novel_gene_chr3_1360 TPM= 3.5 Transcript Type= NA
chr3	37452119	37823514	37452119	37823514	+	ENST00000264741.9@ITGA9	ENST00000264741.9	protein_coding	37452119,37471007,37473354,37481484,37494501,37503178,37506000,37508559,37513763,37517504,37519260,37523521,37526026,37533314,37542425,37629187,37653714,37683865,37732712,37736904,37741730,37743926,37750462,37777392,37779902,37784977,37803823,37818891	37452559,37471134,37473460,37481607,37494568,37503307,37506085,37508627,37513900,37517609,37519354,37523611,37526071,37533468,37542585,37629336,37653790,37684015,37732798,37736983,37741819,37744034,37750569,37777517,37780021,37785078,37803942,37823514	Gene ID= ENSG00000144668.11 TPM= 36.2 Transcript Type= protein_coding
chr3	37818277	37861765	37818277	37861765	-	ENST00000366441.4@ITGA9-AS1	ENST00000366441.4	processed_transcript	37861701,37834679,37821014,37818277	37861765,37834767,37821100,37818930	Gene ID= ENSG00000235257.8 TPM= 2.34 Transcript Type= antisense_RNA
chr3	37861859	37984468	37861859	37984468	+	transcript1389.chr3.nic@CTDSPL	transcript1389.chr3.nic	protein_coding	37861859,37947057,37957111,37964571,37967826,37971407,37975709,37980742,37981825	37862278,37947211,37957143,37964672,37967882,37971499,37975894,37980863,37984468	Gene ID= ENSG00000144677.14 TPM= 9.05 Transcript Type= NA
chr3	37861859	37984468	37861859	37984468	+	transcript1395.chr3.nic@CTDSPL	transcript1395.chr3.nic	protein_coding	37861859,37947057,37964571,37967826,37971407,37975709,37980742,37981825	37862278,37947211,37964672,37967882,37971499,37975894,37980863,37984468	Gene ID= ENSG00000144677.14 TPM= 10.22 Transcript Type= NA
chr3	37861960	37984469	37861960	37984469	+	ENST00000443503.6@CTDSPL	ENST00000443503.6	protein_coding	37861960,37947057,37964571,37967826,37971407,37975709,37980742	37862278,37947211,37964672,37967882,37971499,37975894,37984469	Gene ID= ENSG00000144677.14 TPM= 17.22 Transcript Type= protein_coding
chr3	37862174	37984469	37862174	37984469	+	ENST00000273179.9@CTDSPL	ENST00000273179.9	protein_coding	37862174,37947057,37957111,37964571,37967826,37971407,37975709,37980742	37862278,37947211,37957143,37964672,37967882,37971499,37975894,37984469	Gene ID= ENSG00000144677.14 TPM= 16.05 Transcript Type= protein_coding
chr3	37990789	38007185	37990789	38007185	+	transcript1413.chr3.nic@VILL	transcript1413.chr3.nic	protein_coding	37990789,37993587,37993898,37994261,37995739,37997077,37997483,37998090,37998266,37998912,37999339,38001456,38001702,38002396,38003168,38004255,38005792,38006181,38006449,38006942	37990829,37993732,37993972,37994466,37995847,37997187,37997685,37998168,37998364,37999050,37999439,38001593,38001860,38002575,38003313,38004399,38005974,38006252,38006700,38007185	Gene ID= ENSG00000136059.14 TPM= 11.68 Transcript Type= NA
chr3	37994105	38007185	37994105	38007185	+	transcript1414.chr3.nic@VILL	transcript1414.chr3.nic	protein_coding	37994105,37995739,37997077,37997483,37998090,37998266,37998912,37999339,38001456,38001702,38002396,38003168,38004255,38005792,38006181,38006449,38006942	37994466,37995847,37997187,37997685,37998168,37998364,37999050,37999439,38001593,38001860,38002575,38003313,38004399,38005974,38006252,38006700,38007185	Gene ID= ENSG00000136059.14 TPM= 10.51 Transcript Type= NA
chr3	38007498	38024787	38007498	38024787	-	ENST00000463876.5@PLCD1	ENST00000463876.5	protein_coding	38024337,38020188,38016491,38011544,38011214,38010361,38010131,38009904,38009653,38009272,38009042,38008458,38008235,38008014,38007498	38024787,38020352,38016719,38011673,38011445,38010562,38010275,38010053,38009811,38009431,38009158,38008636,38008367,38008163,38007858	Gene ID= ENSG00000187091.13 TPM= 14.21 Transcript Type= protein_coding
chr3	38007498	38029762	38007498	38029762	-	ENST00000334661.4@PLCD1	ENST00000334661.4	protein_coding	38029506,38020188,38016491,38011544,38011214,38010361,38010131,38009904,38009653,38009272,38009042,38008458,38008235,38008014,38007498	38029762,38020352,38016719,38011673,38011445,38010562,38010275,38010053,38009811,38009431,38009158,38008636,38008367,38008163,38007858	Gene ID= ENSG00000187091.13 TPM= 32.89 Transcript Type= protein_coding
chr3	38007496	38029664	38007496	38029664	-	transcript1420.chr3.nic@PLCD1	transcript1420.chr3.nic	protein_coding	38029506,38020188,38016491,38011544,38011214,38010361,38009904,38009653,38009272,38009042,38008458,38008235,38008014,38007496	38029664,38020352,38016719,38011673,38011445,38010562,38010275,38009811,38009431,38009158,38008636,38008367,38008163,38007858	Gene ID= ENSG00000187091.13 TPM= 6.62 Transcript Type= NA
chr3	38122711	38137148	38122711	38137148	-	transcript1442.chr3.nic@ACAA1	transcript1442.chr3.nic	protein_coding	38136865,38136592,38133952,38131926,38131596,38129290,38127786,38126162,38125826,38125565,38122711	38137148,38136685,38134009,38132005,38131638,38129388,38127866,38126700,38125881,38125710,38123122	Gene ID= ENSG00000060971.17 TPM= 6.07 Transcript Type= NA
chr3	38122711	38137137	38122711	38137137	-	transcript1444.chr3.nic@ACAA1	transcript1444.chr3.nic	protein_coding	38136865,38136592,38133952,38131926,38131596,38129290,38127786,38126510,38125826,38125565,38122711	38137137,38136685,38134009,38132005,38131638,38129388,38127866,38126700,38125881,38125710,38123122	Gene ID= ENSG00000060971.17 TPM= 8.76 Transcript Type= NA
chr3	38122710	38137242	38122710	38137242	-	ENST00000411549.5@ACAA1	ENST00000411549.5	protein_coding	38136865,38136592,38133952,38131926,38129290,38127786,38126162,38125826,38125565,38122710	38137242,38136685,38134009,38132005,38129388,38127866,38126700,38125881,38125710,38123122	Gene ID= ENSG00000060971.17 TPM= 2.57 Transcript Type= nonsense_mediated_decay
chr3	38122711	38137133	38122711	38137133	-	transcript1449.chr3.nic@ACAA1	transcript1449.chr3.nic	protein_coding	38136865,38136592,38133952,38131926,38131596,38129290,38127786,38125826,38125565,38122711	38137133,38136685,38134009,38132005,38131638,38129388,38127866,38126700,38125710,38123122	Gene ID= ENSG00000060971.17 TPM= 13.43 Transcript Type= NA
chr3	38122711	38137148	38122711	38137148	-	transcript1453.chr3.nic@ACAA1	transcript1453.chr3.nic	protein_coding	38136865,38136592,38133952,38131926,38129290,38127786,38125826,38125565,38122711	38137148,38136685,38134009,38132005,38129388,38127866,38126700,38125710,38123122	Gene ID= ENSG00000060971.17 TPM= 7.59 Transcript Type= NA
chr3	38122710	38137208	38122710	38137208	-	ENST00000333167.12@ACAA1	ENST00000333167.12	protein_coding	38136865,38136592,38133952,38131926,38131596,38129290,38127786,38126510,38126162,38125826,38125565,38122710	38137208,38136685,38134009,38132005,38131638,38129388,38127866,38126700,38126341,38125881,38125710,38123122	Gene ID= ENSG00000060971.17 TPM= 115.83 Transcript Type= protein_coding
chr3	38138478	38143022	38138478	38143022	+	ENST00000396334.7@MYD88	ENST00000396334.7	protein_coding	38138478,38139864,38140388,38140757,38141132	38139028,38139998,38140568,38140848,38143022	Gene ID= ENSG00000172936.12 TPM= 226.98 Transcript Type= protein_coding
chr3	38138478	38143019	38138478	38143019	+	ENST00000417037.6@MYD88	ENST00000417037.6	protein_coding	38138478,38139864,38140388,38140757,38141132	38139028,38139998,38140592,38140848,38143019	Gene ID= ENSG00000172936.12 TPM= 3.97 Transcript Type= protein_coding
chr3	38138607	38143022	38138607	38143022	+	transcript1463.chr3.nic@MYD88	transcript1463.chr3.nic	protein_coding	38138607,38139864,38140388,38141132	38139028,38139998,38140848,38143022	Gene ID= ENSG00000172936.12 TPM= 15.65 Transcript Type= NA
chr3	38138651	38143022	38138651	38143022	+	ENST00000416282.2@MYD88	ENST00000416282.2	protein_coding	38138651,38140388,38141132	38139028,38140848,38143022	Gene ID= ENSG00000172936.12 TPM= 6.31 Transcript Type= retained_intron
chr3	38165498	38255488	38165498	38255488	+	transcript1475.chr3.nnic@OXSR1	transcript1475.chr3.nnic	protein_coding	38165498,38183003,38190731,38198722,38216096,38221578,38223812,38224571,38229687,38230365,38236839,38246075,38247668,38249966,38251403,38252328,38252817	38165946,38183115,38190839,38198863,38216151,38221687,38223913,38224704,38229735,38230430,38236961,38246221,38247732,38250018,38251471,38252392,38255488	Gene ID= ENSG00000172939.8 TPM= 2.34 Transcript Type= NA
chr3	38165505	38255488	38165505	38255488	+	ENST00000311806.7@OXSR1	ENST00000311806.7	protein_coding	38165505,38183003,38190731,38198722,38216096,38221578,38223812,38224571,38229687,38230365,38236839,38242743,38246075,38247668,38249966,38251403,38252328,38252817	38165946,38183115,38190839,38198863,38216151,38221687,38223913,38224704,38229735,38230430,38236961,38242778,38246221,38247732,38250018,38251471,38252392,38255488	Gene ID= ENSG00000172939.8 TPM= 54.88 Transcript Type= protein_coding
chr3	38346779	38414976	38346779	38414976	+	ENST00000207870.7@XYLB	ENST00000207870.7	protein_coding	38346779,38348550,38360339,38362937,38365199,38365608,38366808,38368185,38370056,38372655,38374462,38375144,38376117,38376918,38379246,38395505,38397072,38400891,38412936	38346925,38348632,38360408,38363017,38365285,38365736,38366873,38368257,38370174,38372736,38374502,38375259,38376232,38376991,38379342,38395563,38397159,38400985,38414976	Gene ID= ENSG00000093217.9 TPM= 1.17 Transcript Type= protein_coding
chr3	38346787	38403306	38346787	38403306	+	transcript1479.chr3.nic@XYLB	transcript1479.chr3.nic	protein_coding	38346787,38348550,38360339,38362937,38365199,38365608,38366808,38368185,38370056,38372655,38374462,38375144,38376117,38376918,38379246,38395505,38397072,38400891	38346925,38348632,38360408,38363017,38365285,38365736,38366873,38368257,38370174,38372736,38374502,38375259,38376232,38376991,38379342,38395563,38397159,38403306	Gene ID= ENSG00000093217.9 TPM= 3.5 Transcript Type= NA
chr3	38453851	38493142	38453851	38493142	+	ENST00000352511.4@ACVR2B	ENST00000352511.4	protein_coding	38453851,38477287,38477861,38478141,38478375,38479128,38479678,38481351,38482198,38482430,38483138	38454374,38477494,38477970,38478292,38478518,38479271,38479826,38481465,38482336,38482560,38493142	Gene ID= ENSG00000114739.13 TPM= 38.53 Transcript Type= protein_coding
chr3	38497605	38524677	38497605	38524677	+	transcript1491.chr3.nnic@EXOG	transcript1491.chr3.nnic	protein_coding	38497605,38503613,38506854,38523901	38501494,38503691,38506968,38524677	Gene ID= ENSG00000157036.12 TPM= 3.5 Transcript Type= NA
chr3	38537825	38541426	38537825	38541426	+	transcript1492.chr3.nnic@NA	transcript1492.chr3.nnic	NA	38537825	38541426	Gene ID= novel_gene_chr3_1493 TPM= 2.34 Transcript Type= NA
chr3	39051987	39096671	39051987	39096671	+	transcript1495.chr3.nic@WDR48	transcript1495.chr3.nic	protein_coding	39051987,39063050,39065811,39066548,39066746,39068771,39069643,39074726,39077139,39078137,39079711,39084155,39084645,39085515,39088128,39089231,39091625,39093874,39094648,39095481	39052073,39063190,39065889,39066630,39066875,39068859,39069744,39074950,39077213,39078239,39079808,39084262,39084741,39085610,39088233,39089318,39091701,39094066,39095414,39096671	Gene ID= ENSG00000114742.13 TPM= 3.5 Transcript Type= NA
chr3	39051987	39096662	39051987	39096662	+	transcript1498.chr3.nic@WDR48	transcript1498.chr3.nic	protein_coding	39051987,39063050,39065811,39066548,39068771,39069643,39074726,39077139,39078137,39079711,39084155,39084645,39085515,39088128,39089231,39091625,39093874,39094648	39052073,39063190,39065889,39066630,39068859,39069744,39074950,39077213,39078239,39079808,39084262,39084741,39085610,39088233,39089318,39091701,39094066,39096662	Gene ID= ENSG00000114742.13 TPM= 4.67 Transcript Type= NA
chr3	39051998	39096388	39051998	39096388	+	ENST00000302313.9@WDR48	ENST00000302313.9	protein_coding	39051998,39063050,39065811,39066548,39066746,39068771,39069643,39074726,39077139,39078137,39079711,39084155,39084645,39085515,39088128,39089231,39091625,39093874,39094648	39052073,39063190,39065889,39066630,39066875,39068859,39069744,39074950,39077213,39078239,39079808,39084262,39084741,39085610,39088233,39089318,39091701,39094066,39096388	Gene ID= ENSG00000114742.13 TPM= 2.34 Transcript Type= protein_coding
chr3	39096659	39108363	39096659	39108363	-	ENST00000319283.7@GORASP1	ENST00000319283.7	protein_coding	39107479,39103473,39102678,39101016,39100747,39100305,39099353,39098741,39096659	39108363,39103553,39102881,39101102,39100877,39100503,39099503,39098893,39098489	Gene ID= ENSG00000114745.13 TPM= 73.94 Transcript Type= protein_coding
chr3	39096599	39107627	39096599	39107627	-	transcript1539.chr3.nic@GORASP1	transcript1539.chr3.nic	protein_coding	39107479,39102678,39100305,39099353,39098741,39096599	39107627,39103553,39101102,39099503,39098893,39098489	Gene ID= ENSG00000114745.13 TPM= 7.01 Transcript Type= NA
chr3	39096665	39107621	39096665	39107621	-	ENST00000452389.6@GORASP1	ENST00000452389.6	protein_coding	39107479,39103473,39102678,39101016,39100788,39100305,39099353,39098741,39096665	39107621,39103553,39102881,39101102,39100877,39100503,39099503,39098893,39098489	Gene ID= ENSG00000114745.13 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr3	39139842	39143087	39139842	39143087	-	transcript1564.chr3.nnic@NA	transcript1564.chr3.nnic	NA	39139842	39143087	Gene ID= novel_gene_chr3_1565 TPM= 3.5 Transcript Type= NA
chr3	39141855	39153575	39141855	39153575	-	ENST00000273153.9@CSRNP1	ENST00000273153.9	protein_coding	39153438,39146478,39144997,39144137,39141855	39153575,39146722,39145256,39144451,39144044	Gene ID= ENSG00000144655.14 TPM= 278.47 Transcript Type= protein_coding
chr3	39263494	39280034	39263494	39280034	-	ENST00000399220.2@CX3CR1	ENST00000399220.2	protein_coding	39279954,39263494	39280034,39266518	Gene ID= ENSG00000168329.13 TPM= 8.17 Transcript Type= protein_coding
chr3	39383348	39397351	39383348	39397351	+	ENST00000273158.8@SLC25A38	ENST00000273158.8	protein_coding	39383348,39389495,39390423,39391441,39391853,39394410,39396398	39383793,39389616,39390507,39391620,39392021,39394576,39397351	Gene ID= ENSG00000144659.10 TPM= 8.17 Transcript Type= protein_coding
chr3	39406689	39412542	39406689	39412542	+	ENST00000301821.10@RPSA	ENST00000301821.10	protein_coding	39406689,39407621,39408606,39410754,39411649,39411896,39412274	39406764,39407786,39408724,39410999,39411777,39412061,39412542	Gene ID= ENSG00000168028.13 TPM= 387.64 Transcript Type= protein_coding
chr3	39406735	39412434	39406735	39412434	+	ENST00000443003.2@RPSA	ENST00000443003.2	protein_coding	39406735,39407621,39408606,39410754,39411649,39411896,39412274	39406764,39407786,39408739,39410999,39411777,39412061,39412434	Gene ID= ENSG00000168028.13 TPM= 394.65 Transcript Type= protein_coding
chr3	39809605	40260321	39809605	40260321	+	ENST00000302541.10@MYRIP	ENST00000302541.10	protein_coding	39809605,39900787,40044050,40151048,40162730,40166846,40167159,40169950,40182220,40189826,40209854,40233859,40244446,40250222,40250439,40251881,40258134	39809916,39900926,40044271,40151184,40162810,40166943,40167239,40170093,40182373,40190463,40210093,40234053,40244607,40250326,40250499,40251999,40260321	Gene ID= ENSG00000170011.13 TPM= 10.51 Transcript Type= protein_coding
chr3	40173145	40309542	40173145	40309542	-	ENST00000625390.2@EIF1B-AS1	ENST00000625390.2	processed_transcript	40309323,40301237,40173145	40309542,40301396,40174722	Gene ID= ENSG00000280739.2 TPM= 1.17 Transcript Type= lincRNA
chr3	40309684	40312424	40309684	40312424	+	ENST00000232905.3@EIF1B	ENST00000232905.3	protein_coding	40309684,40310893,40311470,40311970	40309972,40311056,40311571,40312424	Gene ID= ENSG00000114784.3 TPM= 63.05 Transcript Type= protein_coding
chr3	40387156	40428619	40387156	40428619	+	ENST00000301825.7@ENTPD3	ENST00000301825.7	protein_coding	40387156,40388046,40392023,40400894,40411812,40414681,40415840,40422850,40423291,40423826,40427272	40387261,40388097,40392150,40401011,40411962,40414840,40416073,40423122,40423401,40423963,40428619	Gene ID= ENSG00000168032.8 TPM= 4.67 Transcript Type= protein_coding
chr3	40446343	40453329	40446343	40453329	-	ENST00000420850.1@ENTPD3-AS1	ENST00000420850.1	antisense_RNA	40453122,40451705,40446343	40453329,40451782,40446847	Gene ID= ENSG00000223797.5 TPM= 2.34 Transcript Type= antisense_RNA
chr3	40457292	40468587	40457292	40468587	+	ENST00000338970.10@RPL14	ENST00000338970.10	protein_coding	40457292,40457890,40458642,40461407,40461608,40461939	40457363,40457991,40458736,40461506,40461661,40468587	Gene ID= ENSG00000188846.13 TPM= 14.01 Transcript Type= protein_coding
chr3	40457354	40462280	40457354	40462280	+	ENST00000416518.1@RPL14	ENST00000416518.1	protein_coding	40457354,40457890,40458642,40461407,40461608,40461941	40457474,40457991,40458736,40461506,40461661,40462280	Gene ID= ENSG00000188846.13 TPM= 295.4 Transcript Type= protein_coding
chr3	40457340	40462368	40457340	40462368	+	ENST00000396203.6@RPL14	ENST00000396203.6	protein_coding	40457340,40457890,40458642,40461407,40461608,40461939	40457474,40457991,40458736,40461506,40461661,40462368	Gene ID= ENSG00000188846.13 TPM= 5.84 Transcript Type= protein_coding
chr3	40524885	40537696	40524885	40537696	+	ENST00000339296.9@ZNF621	ENST00000339296.9	protein_coding	40524885,40525779,40529319,40530209,40532030	40525274,40525864,40529445,40530316,40537696	Gene ID= ENSG00000172888.11 TPM= 1.17 Transcript Type= protein_coding
chr3	40535923	40539534	40535923	40539534	+	transcript1611.chr3.nnic@NA	transcript1611.chr3.nnic	NA	40535923	40539534	Gene ID= novel_gene_chr3_1612 TPM= 3.5 Transcript Type= NA
chr3	41199439	41240453	41199439	41240453	+	ENST00000349496.9@CTNNB1	ENST00000349496.9	protein_coding	41199439,41224021,41224526,41224954,41225334,41225660,41227208,41233341,41233529,41234139,41235724,41236349,41236588,41238016,41239134	41199670,41224081,41224753,41225207,41225572,41225861,41227352,41233444,41233867,41234297,41235843,41236499,41236709,41238076,41240453	Gene ID= ENSG00000168036.16 TPM= 103.2 Transcript Type= protein_coding
chr3	41199434	41240443	41199434	41240443	+	ENST00000396183.7@CTNNB1	ENST00000396183.7	protein_coding	41199434,41224021,41224526,41224954,41225334,41225660,41227208,41233341,41233529,41234139,41235724,41236349,41236588,41238016,41239134,41239819	41199670,41224081,41224753,41225207,41225572,41225861,41227352,41233444,41233867,41234297,41235843,41236499,41236709,41238076,41239354,41240443	Gene ID= ENSG00000168036.16 TPM= 61.17 Transcript Type= protein_coding
chr3	41199505	41240443	41199505	41240443	+	ENST00000396185.7@CTNNB1	ENST00000396185.7	protein_coding	41199505,41224021,41224526,41224954,41225334,41225660,41227208,41233341,41233529,41234139,41235724,41236349,41236588,41238016,41239134,41239660	41199670,41224081,41224753,41225207,41225572,41225861,41227352,41233444,41233867,41234297,41235843,41236499,41236709,41238076,41239354,41240443	Gene ID= ENSG00000168036.16 TPM= 34.32 Transcript Type= protein_coding
chr3	41203037	41207072	41203037	41207072	-	transcript1636.chr3.nnic@NA	transcript1636.chr3.nnic	NA	41203037	41207072	Gene ID= novel_gene_chr3_1637 TPM= 9.34 Transcript Type= NA
chr3	41882150	41962106	41882150	41962106	-	transcript1638.chr3.nic@ULK4	transcript1638.chr3.nic	protein_coding	41962016,41954622,41938098,41935801,41931844,41919717,41918457,41915977,41912807,41911541,41911317,41907845,41900725,41898432,41896822,41895518,41883874,41882150	41962106,41954807,41938197,41935940,41932006,41919818,41918540,41916052,41912899,41911659,41911386,41907941,41900829,41898492,41897003,41895564,41883952,41882280	Gene ID= ENSG00000168038.10 TPM= 3.5 Transcript Type= NA
chr3	42013603	42225768	42013603	42225768	+	transcript1644.chr3.nnic@TRAK1	transcript1644.chr3.nnic	protein_coding	42013603,42087104,42125420,42176814,42184685,42188045,42189016,42191558,42193075,42193824,42194804,42199177,42200818,42202436,42209767,42219494,42222942	42014117,42087400,42125614,42176890,42184801,42188145,42189124,42191636,42193205,42193898,42194941,42199253,42201054,42202752,42209922,42219596,42225768	Gene ID= ENSG00000182606.14 TPM= 30.74 Transcript Type= NA
chr3	42013603	42210425	42013603	42210425	+	transcript1647.chr3.nic@TRAK1	transcript1647.chr3.nic	protein_coding	42013603,42087104,42125420,42176814,42184685,42188045,42189016,42191558,42193075,42193824,42194804,42199177,42200818,42202436,42209767	42014117,42087400,42125614,42176890,42184801,42188145,42189124,42191636,42193205,42193898,42194941,42199253,42201054,42202752,42210425	Gene ID= ENSG00000182606.14 TPM= 13.23 Transcript Type= NA
chr3	42160169	42212623	42160169	42212623	+	ENST00000341421.7@TRAK1	ENST00000341421.7	protein_coding	42160169,42176814,42184685,42188045,42189016,42191558,42193075,42193824,42194804,42199177,42200818,42202436,42209767	42160473,42176890,42184801,42188145,42189124,42191636,42193205,42193898,42194941,42199253,42201054,42202752,42212623	Gene ID= ENSG00000182606.14 TPM= 10.51 Transcript Type= protein_coding
chr3	42185975	42191791	42185975	42191791	-	transcript1660.chr3.nnic@NA	transcript1660.chr3.nnic	NA	42185975	42191791	Gene ID= novel_gene_chr3_1661 TPM= 14.01 Transcript Type= NA
chr3	42257825	42264903	42257825	42264903	-	ENST00000334681.9@CCK	ENST00000334681.9	protein_coding	42264697,42263417,42257825	42264903,42263632,42258231	Gene ID= ENSG00000187094.11 TPM= 1.17 Transcript Type= protein_coding
chr3	42502580	42537567	42502580	42537567	+	transcript1672.chr3.nic@VIPR1	transcript1672.chr3.nic	protein_coding	42502580,42513749,42519223,42525887,42527393,42527991,42530779,42531471,42531803,42532242,42534975,42535343,42536090	42502813,42513854,42519330,42525993,42527496,42528123,42530912,42531531,42531869,42532333,42535104,42535384,42537567	Gene ID= ENSG00000114812.12 TPM= 30.63 Transcript Type= NA
chr3	42502580	42537567	42502580	42537567	+	transcript1683.chr3.nic@VIPR1	transcript1683.chr3.nic	protein_coding	42502580,42513749,42519223,42525887,42527393,42530779,42531471,42531803,42532242,42534975,42535343,42536090	42502813,42513854,42519330,42525993,42528123,42530932,42531531,42531869,42532333,42535104,42535384,42537567	Gene ID= ENSG00000114812.12 TPM= 25.94 Transcript Type= NA
chr3	42502623	42537567	42502623	42537567	+	ENST00000325123.4@VIPR1	ENST00000325123.4	protein_coding	42502623,42513749,42519223,42525887,42527393,42527991,42530779,42531471,42531803,42532242,42534975,42535343,42536090	42502813,42513854,42519330,42525993,42527496,42528123,42530932,42531531,42531869,42532333,42535104,42535384,42537567	Gene ID= ENSG00000114812.12 TPM= 255.38 Transcript Type= protein_coding
chr3	42502612	42537573	42502612	42537573	+	ENST00000543411.5@VIPR1	ENST00000543411.5	protein_coding	42502612,42519223,42525887,42527396,42527991,42530779,42531471,42531803,42532242,42534975,42535343,42536090	42502813,42519330,42525993,42527496,42528123,42530932,42531531,42531869,42532333,42535104,42535384,42537573	Gene ID= ENSG00000114812.12 TPM= 41.12 Transcript Type= protein_coding
chr3	42547971	42581997	42547971	42581997	-	transcript1726.chr3.nic@SEC22C	transcript1726.chr3.nic	protein_coding	42581846,42568865,42563765,42563523,42561117,42557578,42555930,42547971	42581997,42569073,42563980,42563686,42561296,42557696,42555995,42548657	Gene ID= ENSG00000093183.13 TPM= 4.29 Transcript Type= NA
chr3	42547969	42582289	42547969	42582289	-	transcript1733.chr3.nic@SEC22C	transcript1733.chr3.nic	protein_coding	42582193,42568865,42563523,42561117,42557578,42555930,42547969	42582289,42569073,42563686,42561296,42557696,42555995,42553448	Gene ID= ENSG00000093183.13 TPM= 14.01 Transcript Type= NA
chr3	42547971	42582028	42547971	42582028	-	ENST00000273156.11@SEC22C	ENST00000273156.11	protein_coding	42581846,42568865,42563523,42561117,42557578,42555930,42547971	42582028,42569073,42563686,42561296,42557696,42555995,42548657	Gene ID= ENSG00000093183.13 TPM= 41.65 Transcript Type= protein_coding
chr3	42547971	42582289	42547971	42582289	-	transcript1735.chr3.nic@SEC22C	transcript1735.chr3.nic	protein_coding	42582193,42568865,42563523,42561117,42557578,42555930,42547971	42582289,42569073,42563686,42561296,42557696,42555995,42548657	Gene ID= ENSG00000093183.13 TPM= 4.29 Transcript Type= NA
chr3	42552924	42581962	42552924	42581962	-	ENST00000264454.7@SEC22C	ENST00000264454.7	protein_coding	42581846,42568865,42563523,42561117,42557578,42555930,42552924	42581962,42569073,42563686,42561296,42557696,42555995,42553448	Gene ID= ENSG00000093183.13 TPM= 2.34 Transcript Type= protein_coding
chr3	42590838	42594996	42590838	42594996	+	ENST00000011691.5@SS18L2	ENST00000011691.5	protein_coding	42590838,42591525,42594422	42590966,42591601,42594996	Gene ID= ENSG00000008324.11 TPM= 22.18 Transcript Type= protein_coding
chr3	42600641	42638707	42600641	42638707	+	transcript1712.chr3.nic@NKTR	transcript1712.chr3.nic	protein_coding	42600641,42600984,42617570,42619020,42619664,42620016,42621429,42627200,42630546,42631171,42632601,42633580,42634613,42635221,42636868	42600778,42601064,42617644,42619127,42619708,42620043,42621516,42627227,42630575,42631316,42632823,42633735,42634700,42635366,42638707	Gene ID= ENSG00000114857.17 TPM= 3.5 Transcript Type= NA
chr3	42600641	42637000	42600641	42637000	+	transcript1713.chr3.nic@NKTR	transcript1713.chr3.nic	protein_coding	42600641,42600984,42617570,42619020,42619664,42620016,42627200,42630546,42631171,42632601,42633580,42634613,42635221,42636868	42600778,42601064,42617644,42619127,42619708,42621516,42627227,42630575,42631316,42632823,42633735,42634700,42635366,42637000	Gene ID= ENSG00000114857.17 TPM= 3.5 Transcript Type= NA
chr3	42600614	42648741	42600614	42648741	+	ENST00000232978.12@NKTR	ENST00000232978.12	protein_coding	42600614,42600984,42617570,42619020,42619664,42621429,42630546,42631171,42632601,42633580,42634613,42635221,42636868,42642501,42643339,42643902,42645888	42600778,42601064,42617644,42619127,42619708,42621516,42630575,42631316,42632823,42633735,42634700,42635366,42639750,42642596,42643395,42644003,42648741	Gene ID= ENSG00000114857.17 TPM= 12.84 Transcript Type= protein_coding
chr3	42654480	42666152	42654480	42666152	+	transcript1740.chr3.nnic@ZBTB47	transcript1740.chr3.nnic	protein_coding	42654480,42658275,42661485,42663012,42663797,42664237	42654695,42659828,42661632,42663127,42663941,42666152	Gene ID= ENSG00000114853.13 TPM= 22.18 Transcript Type= NA
chr3	42746794	42773253	42746794	42773253	-	ENST00000492806.5@CCDC13	ENST00000492806.5	protein_coding	42773176,42758125,42757066,42752575,42751936,42746794	42773253,42758351,42757214,42752717,42752025,42747373	Gene ID= ENSG00000244607.5 TPM= 1.17 Transcript Type= retained_intron
chr3	42784298	42804535	42784298	42804535	-	transcript1756.chr3.nnic@HIGD1A	transcript1756.chr3.nnic	protein_coding	42804436,42794157,42788622,42786028,42784298	42804535,42794275,42788881,42786162,42785320	Gene ID= ENSG00000181061.13 TPM= 6.42 Transcript Type= NA
chr3	42784298	42804531	42784298	42804531	-	ENST00000321331.11@HIGD1A	ENST00000321331.11	protein_coding	42804436,42794157,42786028,42784298	42804531,42794275,42786162,42785320	Gene ID= ENSG00000181061.13 TPM= 153.54 Transcript Type= protein_coding
chr3	42784330	42804488	42784330	42804488	-	ENST00000418900.6@HIGD1A	ENST00000418900.6	protein_coding	42804436,42794157,42786028,42784330	42804488,42794299,42786162,42785320	Gene ID= ENSG00000181061.13 TPM= 1.17 Transcript Type= protein_coding
chr3	42867458	42868889	42867458	42868889	+	transcript1763.chr3.nnic@NA	transcript1763.chr3.nnic	NA	42867458	42868889	Gene ID= novel_gene_chr3_1764 TPM= 2.34 Transcript Type= NA
chr3	43079234	43106076	43079234	43106076	-	ENST00000344697.2@POMGNT2	ENST00000344697.2	protein_coding	43105836,43079234	43106076,43081536	Gene ID= ENSG00000144647.5 TPM= 32.69 Transcript Type= protein_coding
chr3	43286523	43351138	43286523	43351138	+	transcript1770.chr3.nnic@SNRK	transcript1770.chr3.nnic	protein_coding	43286523,43299754,43303098,43332169,43340287,43343344,43347339	43286808,43299815,43303792,43332310,43340499,43343478,43351138	Gene ID= ENSG00000163788.13 TPM= 12.26 Transcript Type= NA
chr3	43286540	43351138	43286540	43351138	+	ENST00000296088.11@SNRK	ENST00000296088.11	protein_coding	43286540,43299754,43303098,43332169,43340287,43343344,43347339	43286675,43299815,43303792,43332310,43340499,43343478,43351138	Gene ID= ENSG00000163788.13 TPM= 57.8 Transcript Type= protein_coding
chr3	43286538	43351143	43286538	43351143	+	ENST00000429705.6@SNRK	ENST00000429705.6	protein_coding	43286538,43303098,43332169,43340287,43343344,43347339	43286675,43303792,43332310,43340499,43343478,43351143	Gene ID= ENSG00000163788.13 TPM= 25.69 Transcript Type= protein_coding
chr3	43365848	43622068	43365848	43622068	-	ENST00000292246.7@ANO10	ENST00000292246.7	protein_coding	43621909,43605714,43600384,43598532,43580353,43576692,43574809,43565653,43561220,43555278,43549720,43432611,43365848	43622068,43605863,43600581,43598666,43580472,43577261,43574864,43565727,43561402,43555469,43549848,43432727,43366974	Gene ID= ENSG00000160746.12 TPM= 50.21 Transcript Type= protein_coding
chr3	43366348	43490794	43366348	43490794	-	transcript1781.chr3.nnic@ANO10	transcript1781.chr3.nnic	protein_coding	43490684,43432611,43366348	43490794,43432727,43366974	Gene ID= ENSG00000160746.12 TPM= 2.34 Transcript Type= NA
chr3	43690870	43719049	43690870	43719049	+	ENST00000458276.6@ABHD5	ENST00000458276.6	protein_coding	43690870,43699276,43702215,43711709,43714947,43717671,43718443	43691039,43699361,43702587,43711863,43715058,43717857,43719049	Gene ID= ENSG00000011198.7 TPM= 12.84 Transcript Type= protein_coding
chr3	43690892	43699745	43690892	43699745	+	ENST00000486764.1@ABHD5	ENST00000486764.1	protein_coding	43690892,43699276	43691039,43699745	Gene ID= ENSG00000011198.7 TPM= 2.34 Transcript Type= retained_intron
chr3	44338131	44409451	44338131	44409451	+	transcript1798.chr3.nic@TCAIM	transcript1798.chr3.nic	protein_coding	44338131,44354739,44357741,44361365,44367532,44392855,44396400,44396743,44400355,44401203,44407442	44338319,44354811,44357876,44361518,44367708,44392977,44396497,44396834,44400587,44401334,44409451	Gene ID= ENSG00000179152.19 TPM= 5.84 Transcript Type= NA
chr3	44338452	44409451	44338452	44409451	+	ENST00000342649.8@TCAIM	ENST00000342649.8	protein_coding	44338452,44354739,44357741,44361365,44367456,44392855,44396400,44396743,44400355,44401203,44407442	44338834,44354811,44357876,44361518,44367708,44392977,44396497,44396834,44400587,44401334,44409451	Gene ID= ENSG00000179152.19 TPM= 5.84 Transcript Type= protein_coding
chr3	44338119	44359804	44338119	44359804	+	ENST00000383746.7@TCAIM	ENST00000383746.7	protein_coding	44338119,44354739,44357741,44358217	44338319,44354811,44357876,44359804	Gene ID= ENSG00000179152.19 TPM= 1.17 Transcript Type= protein_coding
chr3	44338452	44359802	44338452	44359802	+	ENST00000396078.7@TCAIM	ENST00000396078.7	protein_coding	44338452,44354739,44357741,44358217	44338834,44354811,44357876,44359802	Gene ID= ENSG00000179152.19 TPM= 11.68 Transcript Type= protein_coding
chr3	44338757	44409451	44338757	44409451	+	ENST00000412611.6@TCAIM	ENST00000412611.6	protein_coding	44338757,44354739,44357741,44361365,44367532,44392855,44396400,44396743,44400355,44401203,44407442	44338834,44354811,44357876,44361518,44367708,44392977,44396497,44396834,44400587,44401334,44409451	Gene ID= ENSG00000179152.19 TPM= 12.84 Transcript Type= nonsense_mediated_decay
chr3	44441642	44446876	44441642	44446876	-	transcript1811.chr3.nnic@NA	transcript1811.chr3.nnic	NA	44441642	44446876	Gene ID= novel_gene_chr3_1812 TPM= 4.67 Transcript Type= NA
chr3	44491765	44496389	44491765	44496389	-	transcript1816.chr3.nnic@NA	transcript1816.chr3.nnic	NA	44491765	44496389	Gene ID= novel_gene_chr3_1817 TPM= 4.67 Transcript Type= NA
chr3	44584982	44644903	44584982	44644903	+	transcript1821.chr3.nic@ZNF197	transcript1821.chr3.nic	protein_coding	44584982,44586105,44629074,44631062,44632105,44632473,44641900	44585007,44586213,44629544,44631221,44632196,44632599,44644903	Gene ID= ENSG00000186448.14 TPM= 2.34 Transcript Type= NA
chr3	44648727	44660789	44648727	44660789	+	ENST00000396056.6@ZNF35	ENST00000396056.6	protein_coding	44648727,44650941,44652557,44658701	44648834,44651259,44652701,44660789	Gene ID= ENSG00000169981.10 TPM= 1.17 Transcript Type= protein_coding
chr3	44648742	44660791	44648742	44660791	+	ENST00000296092.7@ZNF35	ENST00000296092.7	protein_coding	44648742,44650941,44658701	44648834,44651259,44660791	Gene ID= ENSG00000169981.10 TPM= 7.01 Transcript Type= protein_coding
chr3	44661860	44666054	44661860	44666054	-	transcript1830.chr3.nnic@NA	transcript1830.chr3.nnic	NA	44661860	44666054	Gene ID= novel_gene_chr3_1831 TPM= 7.01 Transcript Type= NA
chr3	44712646	44723831	44712646	44723831	+	ENST00000296091.8@ZNF502	ENST00000296091.8	protein_coding	44712646,44714591,44720203,44720873	44712744,44714688,44720316,44723831	Gene ID= ENSG00000196653.11 TPM= 1.17 Transcript Type= protein_coding
chr3	44712643	44723829	44712643	44723829	+	ENST00000449836.5@ZNF502	ENST00000449836.5	protein_coding	44712643,44720203,44720873	44712744,44720316,44723829	Gene ID= ENSG00000196653.11 TPM= 10.51 Transcript Type= protein_coding
chr3	44729596	44737083	44729596	44737083	+	ENST00000396048.6@ZNF501	ENST00000396048.6	protein_coding	44729596,44731476,44734197	44729722,44731560,44737083	Gene ID= ENSG00000186446.11 TPM= 2.92 Transcript Type= protein_coding
chr3	44729606	44737083	44729606	44737083	+	ENST00000620116.4@ZNF501	ENST00000620116.4	protein_coding	44729606,44731476,44734197	44730015,44731560,44737083	Gene ID= ENSG00000186446.11 TPM= 1.75 Transcript Type= protein_coding
chr3	44748744	44761662	44748744	44761662	-	ENST00000296121.5@KIAA1143	ENST00000296121.5	protein_coding	44761495,44754224,44748744	44761662,44754368,44753552	Gene ID= ENSG00000163807.5 TPM= 11.68 Transcript Type= protein_coding
chr3	44861891	44874071	44861891	44874071	+	transcript1846.chr3.nnic@KIF15	transcript1846.chr3.nnic	protein_coding	44861891,44873329	44862116,44874071	Gene ID= ENSG00000163808.16 TPM= 3.5 Transcript Type= NA
chr3	44861871	44865670	44861871	44865670	+	transcript1841.chr3.nnic@TMEM42	transcript1841.chr3.nnic	protein_coding	44861871,44862358,44864197,44865040	44862116,44862527,44864343,44865670	Gene ID= ENSG00000169964.7 TPM= 4.67 Transcript Type= NA
chr3	44861869	44865670	44861869	44865670	+	ENST00000302392.4@TMEM42	ENST00000302392.4	protein_coding	44861869,44864197,44865040	44862116,44864343,44865670	Gene ID= ENSG00000169964.7 TPM= 9.34 Transcript Type= protein_coding
chr3	44861892	44865664	44861892	44865664	+	transcript1844.chr3.nnic@TMEM42	transcript1844.chr3.nnic	protein_coding	44861892,44864197,44865135	44862116,44864343,44865664	Gene ID= ENSG00000169964.7 TPM= 3.5 Transcript Type= NA
chr3	44861901	44865670	44861901	44865670	+	transcript1845.chr3.nnic@TMEM42	transcript1845.chr3.nnic	protein_coding	44861901,44864197,44865040	44862015,44864343,44865670	Gene ID= ENSG00000169964.7 TPM= 2.34 Transcript Type= NA
chr3	44861904	44865670	44861904	44865670	+	ENST00000477126.1@TMEM42	ENST00000477126.1	protein_coding	44861904,44865040	44864343,44865670	Gene ID= ENSG00000169964.7 TPM= 2.34 Transcript Type= retained_intron
chr3	44915257	44976195	44915257	44976195	-	transcript1861.chr3.nic@ZDHHC3	transcript1861.chr3.nic	protein_coding	44975933,44959131,44945168,44933888,44933118,44929306,44915257	44976195,44959460,44945292,44933984,44933199,44929436,44918143	Gene ID= ENSG00000163812.13 TPM= 17.81 Transcript Type= NA
chr3	44919979	44976195	44919979	44976195	-	transcript1864.chr3.nnic@ZDHHC3	transcript1864.chr3.nnic	protein_coding	44975933,44959131,44945168,44933888,44933118,44929306,44919979	44976195,44959460,44945292,44933984,44933199,44929436,44922967	Gene ID= ENSG00000163812.13 TPM= 4.96 Transcript Type= NA
chr3	44925171	44976195	44925171	44976195	-	transcript1870.chr3.nnic@ZDHHC3	transcript1870.chr3.nnic	protein_coding	44975933,44959131,44945168,44933888,44933118,44925171	44976195,44959460,44945292,44933984,44933199,44926847	Gene ID= ENSG00000163812.13 TPM= 4.96 Transcript Type= NA
chr3	44925171	44933520	44925171	44933520	-	transcript1874.chr3.nnic@ZDHHC3	transcript1874.chr3.nnic	protein_coding	44933372,44933118,44929306,44925171	44933520,44933199,44929436,44926847	Gene ID= ENSG00000163812.13 TPM= 7.01 Transcript Type= NA
chr3	44925171	44933520	44925171	44933520	-	transcript1878.chr3.nic@ZDHHC3	transcript1878.chr3.nic	protein_coding	44933118,44929306,44925171	44933520,44929436,44926847	Gene ID= ENSG00000163812.13 TPM= 8.17 Transcript Type= NA
chr3	44925171	44976177	44925171	44976177	-	ENST00000424952.6@ZDHHC3	ENST00000424952.6	protein_coding	44975933,44959131,44945168,44933888,44933118,44929306,44925171	44976177,44959460,44945292,44933984,44933199,44929436,44926847	Gene ID= ENSG00000163812.13 TPM= 68.01 Transcript Type= protein_coding
chr3	44938636	44941772	44938636	44941772	+	transcript1881.chr3.nnic@NA	transcript1881.chr3.nnic	NA	44938636	44941772	Gene ID= novel_gene_chr3_1882 TPM= 5.84 Transcript Type= NA
chr3	44976230	45011470	44976230	45011470	+	ENST00000265564.7@EXOSC7	ENST00000265564.7	protein_coding	44976230,44989140,44989550,44997087,45001538,45005291,45007420,45011235	44976334,44989241,44989644,44997252,45001608,45005414,45007575,45011470	Gene ID= ENSG00000075914.12 TPM= 31.53 Transcript Type= protein_coding
chr3	44976234	45011470	44976234	45011470	+	transcript1860.chr3.nic@EXOSC7	transcript1860.chr3.nic	protein_coding	44976234,44989140,44989550,44997087,45001538,45007420,45011235	44976334,44989241,44989644,44997252,45005414,45007575,45011470	Gene ID= ENSG00000075914.12 TPM= 2.34 Transcript Type= NA
chr3	44976264	45012633	44976264	45012633	+	ENST00000491476.5@EXOSC7	ENST00000491476.5	protein_coding	44976264,44989140,44989550,44997087,45001538,45005291,45007420,45011235,45012183	44976334,44989241,44989644,44997252,45001608,45005414,45007575,45011393,45012633	Gene ID= ENSG00000075914.12 TPM= 14.01 Transcript Type= processed_transcript
chr3	45026252	45036066	45026252	45036066	+	transcript1886.chr3.nnic@EXOSC7	transcript1886.chr3.nnic	protein_coding	45026252,45035524	45026471,45036066	Gene ID= ENSG00000075914.12 TPM= 29.77 Transcript Type= NA
chr3	45026183	45036071	45026183	45036071	+	ENST00000296130.4@CLEC3B	ENST00000296130.4	protein_coding	45026183,45030827,45035524	45026471,45030925,45036071	Gene ID= ENSG00000163815.5 TPM= 388.22 Transcript Type= protein_coding
chr3	45089057	45146453	45089057	45146453	-	transcript1893.chr3.nic@CDCP1	transcript1893.chr3.nic	protein_coding	45146206,45118412,45112083,45110473,45095347,45093277,45091173,45089057	45146453,45118621,45112445,45110841,45095568,45093657,45091538,45089141	Gene ID= ENSG00000163814.7 TPM= 4.67 Transcript Type= NA
chr3	45082278	45146422	45082278	45146422	-	ENST00000296129.5@CDCP1	ENST00000296129.5	protein_coding	45146206,45118412,45112083,45110473,45095347,45093277,45091173,45089054,45082278	45146422,45118621,45112445,45110841,45095568,45093657,45091538,45089141,45086067	Gene ID= ENSG00000163814.7 TPM= 12.84 Transcript Type= protein_coding
chr3	45110216	45146422	45110216	45146422	-	ENST00000425231.2@CDCP1	ENST00000425231.2	protein_coding	45146206,45118412,45112083,45110216	45146422,45118621,45112445,45110841	Gene ID= ENSG00000163814.7 TPM= 10.51 Transcript Type= protein_coding
chr3	45224466	45226278	45224466	45226278	-	ENST00000503771.1@TMEM158	ENST00000503771.1	protein_coding	45224466	45226278	Gene ID= ENSG00000249992.1 TPM= 7.01 Transcript Type= protein_coding
chr3	45388506	45548837	45388506	45548837	+	ENST00000265537.7@LARS2	ENST00000265537.7	protein_coding	45388506,45391583,45394433,45400245,45417482,45419669,45446891,45458743,45474243,45476468,45485692,45488697,45491517,45496275,45500442,45513135,45516094,45517903,45520219,45523997,45541829,45547351	45388680,45391648,45394687,45400373,45417573,45419729,45446980,45458886,45474350,45476627,45485796,45488812,45491800,45496373,45500579,45513235,45516276,45518072,45520296,45524108,45541956,45548837	Gene ID= ENSG00000011376.9 TPM= 26.85 Transcript Type= protein_coding
chr3	45635937	45681260	45635937	45681260	+	transcript1900.chr3.nnic@LIMD1	transcript1900.chr3.nnic	protein_coding	45635937,45636150,45665650,45668294,45672690,45673454,45674343,45676922,45680946	45636039,45636251,45665717,45668356,45672820,45673505,45674411,45680363,45681260	Gene ID= ENSG00000144791.9 TPM= 21.6 Transcript Type= NA
chr3	45635937	45681263	45635937	45681263	+	transcript1904.chr3.nnic@LIMD1	transcript1904.chr3.nnic	protein_coding	45635937,45636150,45665650,45668294,45672690,45673454,45674343,45676922	45636039,45636251,45665717,45668356,45672820,45673505,45674411,45681263	Gene ID= ENSG00000144791.9 TPM= 68.3 Transcript Type= NA
chr3	45594104	45675611	45594104	45675611	+	transcript1906.chr3.nic@LIMD1	transcript1906.chr3.nic	protein_coding	45594104,45636150,45665650,45668294,45672690,45673454,45674343	45596287,45636251,45665717,45668356,45672820,45673505,45675611	Gene ID= ENSG00000144791.9 TPM= 14.01 Transcript Type= NA
chr3	45613582	45616840	45613582	45616840	-	transcript1911.chr3.nnic@NA	transcript1911.chr3.nnic	NA	45613582	45616840	Gene ID= novel_gene_chr3_1912 TPM= 5.84 Transcript Type= NA
chr3	45646693	45647894	45646693	45647894	-	transcript1913.chr3.nnic@NA	transcript1913.chr3.nnic	NA	45646693	45647894	Gene ID= novel_gene_chr3_1914 TPM= 4.67 Transcript Type= NA
chr3	45689262	45745424	45689262	45745424	+	ENST00000389061.9@SACM1L	ENST00000389061.9	protein_coding	45689262,45703438,45705135,45706780,45709498,45713137,45714046,45719500,45722000,45722869,45723475,45731301,45732053,45735235,45737583,45737772,45738578,45738781,45739587,45743533	45689497,45703535,45705209,45706907,45709647,45713196,45714079,45719601,45722085,45722955,45723543,45731380,45732151,45735373,45737652,45737844,45738671,45738873,45739644,45745424	Gene ID= ENSG00000211456.10 TPM= 120.26 Transcript Type= protein_coding
chr3	45748900	45754913	45748900	45754913	-	transcript1940.chr3.nnic@NA	transcript1940.chr3.nnic	NA	45748900	45754913	Gene ID= novel_gene_chr3_1941 TPM= 3.5 Transcript Type= NA
chr3	45757914	45796576	45757914	45796576	-	transcript1931.chr3.nic@SLC6A20	transcript1931.chr3.nic	protein_coding	45796299,45782083,45780009,45775761,45772505,45771217,45770209,45765537,45762913,45757914	45796576,45782223,45780100,45775988,45772615,45771458,45770371,45765741,45763072,45760022	Gene ID= ENSG00000163817.15 TPM= 3.5 Transcript Type= NA
chr3	45755450	45796535	45755450	45796535	-	ENST00000358525.8@SLC6A20	ENST00000358525.8	protein_coding	45796299,45782083,45780009,45775761,45772505,45771217,45770209,45765537,45762913,45759857,45755450	45796535,45782223,45780100,45775988,45772615,45771458,45770371,45765741,45763072,45760022,45759127	Gene ID= ENSG00000163817.15 TPM= 9.34 Transcript Type= protein_coding
chr3	45823316	45842166	45823316	45842166	-	ENST00000296135.10@LZTFL1	ENST00000296135.10	protein_coding	45841989,45837927,45835590,45834238,45833050,45831073,45830913,45828439,45827356,45823316	45842166,45838051,45835784,45834298,45833121,45831138,45830990,45828615,45827459,45826332	Gene ID= ENSG00000163818.16 TPM= 5.84 Transcript Type= protein_coding
chr3	45917904	45995815	45917904	45995815	-	ENST00000296137.6@FYCO1	ENST00000296137.6	protein_coding	45995722,45984856,45981570,45979705,45975239,45973088,45969675,45966277,45965033,45964336,45962225,45959393,45958408,45955249,45936448,45931071,45923656,45917904	45995815,45985022,45981676,45979830,45975345,45973231,45969765,45968703,45965125,45964454,45962392,45959542,45958619,45955393,45936543,45931281,45923765,45921840	Gene ID= ENSG00000163820.14 TPM= 85.23 Transcript Type= protein_coding
chr3	45943472	45948353	45943472	45948353	+	ENST00000304552.4@CXCR6	ENST00000304552.4	protein_coding	45943472,45946461	45943540,45948353	Gene ID= ENSG00000172215.5 TPM= 5.84 Transcript Type= protein_coding
chr3	46201709	46208396	46201709	46208396	-	ENST00000296140.3@CCR1	ENST00000296140.3	protein_coding	46208282,46201709	46208396,46204324	Gene ID= ENSG00000163823.3 TPM= 46.7 Transcript Type= protein_coding
chr3	46387726	46407066	46387726	46407066	-	transcript1957.chr3.nnic@AC098613.1	transcript1957.chr3.nnic	antisense_RNA	46406897,46392825,46387726	46407066,46393052,46388132	Gene ID= ENSG00000223552.1 TPM= 3.5 Transcript Type= NA
chr3	46370854	46376206	46370854	46376206	+	ENST00000292303.4@CCR5	ENST00000292303.4	protein_coding	46370854,46372892	46370988,46376206	Gene ID= ENSG00000160791.13 TPM= 3.5 Transcript Type= protein_coding
chr3	46407163	46409523	46407163	46409523	+	ENST00000399036.3@CCRL2	ENST00000399036.3	protein_coding	46407163,46408068	46407502,46409523	Gene ID= ENSG00000121797.9 TPM= 28.02 Transcript Type= protein_coding
chr3	46436019	46463671	46436019	46463671	-	ENST00000426532.6@LTF	ENST00000426532.6	protein_coding	46463444,46459656,46456290,46455796,46455295,46454305,46450495,46449854,46448863,46447308,46446440,46445281,46443441,46441416,46439296,46437940,46436019	46463671,46459819,46456398,46455978,46455442,46454360,46450673,46450028,46449017,46447398,46446493,46445436,46443582,46441483,46439480,46438129,46436229	Gene ID= ENSG00000012223.12 TPM= 10.51 Transcript Type= protein_coding
chr3	46435645	46465163	46435645	46465163	-	ENST00000231751.8@LTF	ENST00000231751.8	protein_coding	46464825,46459656,46456290,46455796,46455295,46454305,46450495,46449854,46448863,46447308,46446440,46445281,46443441,46441416,46439296,46437940,46435645	46465163,46459819,46456398,46455978,46455442,46454360,46450673,46450028,46449017,46447398,46446493,46445436,46443582,46441483,46439480,46438129,46436229	Gene ID= ENSG00000012223.12 TPM= 10.51 Transcript Type= protein_coding
chr3	46577237	46582463	46577237	46582463	+	ENST00000296145.5@TDGF1	ENST00000296145.5	protein_coding	46577237,46579095,46579232,46579739,46579951,46581132	46578004,46579147,46579366,46579853,46580060,46582463	Gene ID= ENSG00000241186.9 TPM= 4.67 Transcript Type= protein_coding
chr3	46670565	46693653	46670565	46693653	-	ENST00000415953.5@ALS2CL	ENST00000415953.5	protein_coding	46693489,46689338,46688098,46687619,46686983,46686308,46685525,46683989,46683782,46683130,46682029,46681500,46681246,46680430,46679210,46678259,46676849,46676642,46676245,46675618,46674566,46673339,46672140,46671884,46671488,46670565	46693653,46689465,46688296,46687684,46687148,46686439,46685644,46684047,46683848,46683326,46682094,46681598,46681407,46680541,46679287,46678389,46677022,46676738,46676402,46675686,46674739,46673381,46672201,46672033,46671584,46671064	Gene ID= ENSG00000178038.16 TPM= 3.5 Transcript Type= protein_coding
chr3	46669189	46693701	46669189	46693701	-	ENST00000318962.8@ALS2CL	ENST00000318962.8	protein_coding	46693643,46689338,46688098,46687619,46686983,46686308,46685525,46683989,46683782,46683130,46682029,46681500,46681246,46680430,46679210,46678259,46676849,46676642,46676245,46675618,46674566,46673339,46672140,46671884,46671488,46669189	46693701,46689465,46688296,46687684,46687148,46686439,46685644,46684047,46683848,46683326,46682094,46681598,46681407,46680541,46679287,46678389,46677022,46676738,46676402,46675686,46674739,46673381,46672201,46672033,46671584,46671064	Gene ID= ENSG00000178038.16 TPM= 28.02 Transcript Type= protein_coding
chr3	46673694	46678013	46673694	46678013	+	transcript2030.chr3.nnic@NA	transcript2030.chr3.nnic	NA	46673694	46678013	Gene ID= novel_gene_chr3_2031 TPM= 5.84 Transcript Type= NA
chr3	46691724	46693695	46691724	46693695	-	transcript2032.chr3.nnic@NA	transcript2032.chr3.nnic	NA	46691724	46693695	Gene ID= novel_gene_chr3_2033 TPM= 5.84 Transcript Type= NA
chr3	46693782	46710886	46693782	46710886	+	transcript2034.chr3.nnic@TMIE	transcript2034.chr3.nnic	protein_coding	46693782,46694446,46705790,46709126,46709579	46694135,46694618,46705907,46709275,46710886	Gene ID= ENSG00000181585.3 TPM= 3.5 Transcript Type= NA
chr3	46693778	46710886	46693778	46710886	+	transcript2035.chr3.nnic@TMIE	transcript2035.chr3.nnic	protein_coding	46693778,46705790,46709126,46709579	46694618,46705907,46709275,46710886	Gene ID= ENSG00000181585.3 TPM= 3.5 Transcript Type= NA
chr3	46835110	46882171	46835110	46882171	-	transcript2062.chr3.nnic@MYL3	transcript2062.chr3.nnic	protein_coding	46882074,46866390,46863262,46860960,46860676,46859475,46858384,46858231,46835110	46882171,46866600,46863396,46860987,46860825,46859648,46858461,46858272,46836203	Gene ID= ENSG00000160808.9 TPM= 2.34 Transcript Type= NA
chr3	46881983	46903795	46881983	46903795	+	transcript2037.chr3.nnic@PTH1R	transcript2037.chr3.nnic	protein_coding	46881983,46883512,46893907,46895735,46897855,46898074,46898378,46898662,46899303,46901025,46901414,46901766,46902526,46902749,46903270	46882084,46883634,46894009,46895869,46897965,46898192,46898472,46898857,46899456,46901085,46901480,46901860,46902667,46902790,46903795	Gene ID= ENSG00000160801.13 TPM= 4.71 Transcript Type= NA
chr3	46882237	46903795	46882237	46903795	+	transcript2038.chr3.nnic@PTH1R	transcript2038.chr3.nnic	protein_coding	46882237,46883512,46893907,46895696,46897855,46898074,46898378,46898662,46899303,46901025,46901414,46901766,46902526,46902749,46903270	46882464,46883634,46894009,46895869,46897965,46898192,46898472,46898857,46899456,46901085,46901480,46901860,46902667,46902790,46903795	Gene ID= ENSG00000160801.13 TPM= 5.29 Transcript Type= NA
chr3	46882237	46903795	46882237	46903795	+	transcript2045.chr3.nic@PTH1R	transcript2045.chr3.nic	protein_coding	46882237,46883512,46893907,46895735,46897855,46898074,46898378,46898662,46899303,46901025,46901766,46902526,46902749,46903270	46882464,46883634,46894009,46895869,46897965,46898192,46898472,46898857,46899456,46901480,46901860,46902667,46902790,46903795	Gene ID= ENSG00000160801.13 TPM= 2.57 Transcript Type= NA
chr3	46882237	46903795	46882237	46903795	+	transcript2048.chr3.nnic@PTH1R	transcript2048.chr3.nnic	protein_coding	46882237,46883512,46895735,46897855,46898074,46898378,46898662,46899303,46901025,46901414,46901766,46902526,46902749,46903270	46882464,46883634,46895869,46897965,46898192,46898472,46898857,46899456,46901085,46901480,46901860,46902667,46902790,46903795	Gene ID= ENSG00000160801.13 TPM= 6.46 Transcript Type= NA
chr3	46882237	46903795	46882237	46903795	+	transcript2052.chr3.nic@PTH1R	transcript2052.chr3.nic	protein_coding	46882237,46883512,46893907,46895735,46897855,46898074,46898378,46898662,46899303,46901025,46902526,46902749,46903270	46882464,46883634,46894009,46895869,46897965,46898192,46898472,46898857,46899456,46901860,46902667,46902790,46903795	Gene ID= ENSG00000160801.13 TPM= 6.07 Transcript Type= NA
chr3	46883357	46903794	46883357	46903794	+	ENST00000313049.9@PTH1R	ENST00000313049.9	protein_coding	46883357,46893907,46895735,46897855,46898074,46898378,46898662,46899303,46901025,46901414,46901766,46902526,46902749,46903270	46883634,46894009,46895869,46897965,46898192,46898472,46898857,46899456,46901085,46901480,46901860,46902667,46902790,46903794	Gene ID= ENSG00000160801.13 TPM= 11.09 Transcript Type= protein_coding
chr3	46921731	46976472	46921731	46976472	-	transcript2075.chr3.nic@CCDC12	transcript2075.chr3.nic	protein_coding	46976353,46940998,46925456,46923607,46923329,46922236,46921731	46976472,46941065,46925535,46923668,46923363,46922312,46922139	Gene ID= ENSG00000160799.11 TPM= 3.5 Transcript Type= NA
chr3	46921731	46982010	46921731	46982010	-	ENST00000292314.6@CCDC12	ENST00000292314.6	protein_coding	46981932,46976637,46940998,46925456,46923607,46923329,46922236,46921731	46982010,46976843,46941065,46925535,46923668,46923363,46922312,46922139	Gene ID= ENSG00000160799.11 TPM= 24.52 Transcript Type= protein_coding
chr3	47002533	47009703	47002533	47009703	+	transcript2066.chr3.nic@NBEAL2	transcript2066.chr3.nic	protein_coding	47002533,47002957,47003174,47003816,47004077,47004495,47004972,47005181,47005489,47005738,47005946,47006165,47006333,47007066,47007241,47007525,47007816,47008070,47008283,47008520,47008989,47009219	47002802,47003081,47003309,47003976,47004393,47004590,47005096,47005321,47005619,47005847,47006063,47006262,47006449,47007155,47007350,47007697,47007910,47008186,47008441,47008668,47009124,47009703	Gene ID= ENSG00000160796.16 TPM= 5.84 Transcript Type= NA
chr3	46979683	47009703	46979683	47009703	+	ENST00000450053.7@NBEAL2	ENST00000450053.7	protein_coding	46979683,46988669,46988842,46989085,46989260,46989511,46991219,46991406,46991840,46992475,46993937,46994455,46995032,46995714,46995932,46996271,46996751,46996954,46997259,46997561,46998067,46998463,46998717,46998959,46999315,46999630,46999889,47001001,47001279,47001689,47001920,47002371,47002645,47002957,47003174,47003816,47004077,47004495,47004972,47005181,47005489,47005738,47005946,47006165,47006333,47007066,47007241,47007525,47007816,47008070,47008283,47008520,47008989,47009219	46979912,46988757,46988970,46989166,46989381,46989593,46991304,46991688,46991946,46992555,46994020,46994553,46995633,46995846,46996051,46996592,46996833,46997046,46997433,46997694,46998226,46998565,46998879,46999117,46999474,46999715,47000404,47001179,47001438,47001826,47002288,47002520,47002802,47003081,47003309,47003976,47004393,47004590,47005096,47005321,47005619,47005847,47006063,47006262,47006449,47007155,47007350,47007697,47007910,47008186,47008441,47008668,47009124,47009703	Gene ID= ENSG00000160796.16 TPM= 140.11 Transcript Type= protein_coding
chr3	47109366	47111109	47109366	47111109	+	transcript2082.chr3.nnic@NA	transcript2082.chr3.nnic	NA	47109366	47111109	Gene ID= novel_gene_chr3_2083 TPM= 5.84 Transcript Type= NA
chr3	47163424	47169952	47163424	47169952	+	transcript2081.chr3.nic@KIF9-AS1	transcript2081.chr3.nic	antisense_RNA	47163424,47169169	47164597,47169952	Gene ID= ENSG00000227398.3 TPM= 2.34 Transcript Type= NA
chr3	47228397	47282847	47228397	47282847	-	ENST00000444589.6@KIF9	ENST00000444589.6	protein_coding	47282495,47277282,47275325,47273552,47271237,47267180,47266976,47265730,47264286,47257483,47248018,47247373,47246197,47245421,47244791,47240801,47236443,47236034,47235513,47228397	47282847,47277379,47275490,47273658,47271461,47267263,47267068,47265877,47264350,47257560,47248086,47247477,47246252,47245511,47244924,47241015,47236619,47236149,47235617,47228702	Gene ID= ENSG00000088727.12 TPM= 1.17 Transcript Type= protein_coding
chr3	47275228	47282766	47275228	47282766	-	ENST00000432493.5@KIF9	ENST00000432493.5	protein_coding	47282495,47277282,47275228	47282766,47277379,47275490	Gene ID= ENSG00000088727.12 TPM= 9.34 Transcript Type= protein_coding
chr3	47282659	47346816	47282659	47346816	+	transcript2087.chr3.nnic@KLHL18	transcript2087.chr3.nnic	protein_coding	47282659,47319653,47322568,47329951,47333157,47334683,47336520,47340572,47342719,47343555	47283094,47319783,47322708,47330149,47333317,47334819,47336757,47340676,47342830,47346816	Gene ID= ENSG00000114648.11 TPM= 7.01 Transcript Type= NA
chr3	47282946	47346816	47282946	47346816	+	ENST00000232766.5@KLHL18	ENST00000232766.5	protein_coding	47282946,47319653,47322568,47329951,47333157,47334683,47336535,47340572,47342719,47343555	47283094,47319783,47322708,47330149,47333317,47334819,47336757,47340676,47342830,47346816	Gene ID= ENSG00000114648.11 TPM= 16.35 Transcript Type= protein_coding
chr3	47282959	47287458	47282959	47287458	+	ENST00000483201.1@KLHL18	ENST00000483201.1	protein_coding	47282959,47287220	47283094,47287458	Gene ID= ENSG00000114648.11 TPM= 1.17 Transcript Type= processed_transcript
chr3	47410895	47413435	47410895	47413435	+	transcript2113.chr3.nic@PTPN23	transcript2113.chr3.nic	protein_coding	47410895,47411783,47412094,47412283,47412514	47411686,47411967,47412198,47412421,47413435	Gene ID= ENSG00000076201.14 TPM= 7.01 Transcript Type= NA
chr3	47381020	47413441	47381020	47413441	+	ENST00000265562.4@PTPN23	ENST00000265562.4	protein_coding	47381020,47396143,47404652,47405005,47405749,47405915,47406325,47406481,47406703,47407130,47407309,47407505,47407697,47407890,47408345,47408776,47409163,47409417,47409655,47409928,47411783,47412094,47412283,47412514,47412706	47381180,47396217,47404779,47405081,47405798,47406046,47406405,47406612,47406750,47407186,47407367,47407584,47407811,47407955,47408490,47409087,47409317,47409568,47409834,47411686,47411967,47412198,47412421,47412627,47413441	Gene ID= ENSG00000076201.14 TPM= 30.36 Transcript Type= protein_coding
chr3	47413713	47476113	47413713	47476113	-	ENST00000265565.9@SCAP	ENST00000265565.9	protein_coding	47475799,47442872,47435008,47428513,47427447,47427157,47425997,47425485,47423933,47422442,47420931,47420554,47419328,47418655,47418321,47418134,47417304,47417122,47415098,47414827,47414572,47414180,47413713	47476113,47443091,47435137,47428670,47427667,47427262,47426169,47425611,47424045,47422536,47421029,47420772,47419704,47418843,47418522,47418249,47417826,47417207,47415180,47414993,47414652,47414386,47414099	Gene ID= ENSG00000114650.18 TPM= 82.32 Transcript Type= protein_coding
chr3	47413713	47475940	47413713	47475940	-	transcript2108.chr3.nic@SCAP	transcript2108.chr3.nic	protein_coding	47475799,47442872,47435008,47422442,47420931,47420554,47419328,47418655,47418321,47418134,47417304,47417122,47415098,47414827,47414572,47414180,47413713	47475940,47443091,47435137,47422536,47421029,47420772,47419704,47418843,47418522,47418249,47417823,47417207,47415180,47414993,47414652,47414386,47414099	Gene ID= ENSG00000114650.18 TPM= 63.63 Transcript Type= NA
chr3	47472206	47473097	47472206	47473097	+	transcript2117.chr3.nnic@NA	transcript2117.chr3.nnic	NA	47472206	47473097	Gene ID= novel_gene_chr3_2118 TPM= 3.5 Transcript Type= NA
chr3	47495640	47513761	47495640	47513761	-	ENST00000296149.8@ELP6	ENST00000296149.8	protein_coding	47513537,47511148,47510184,47504330,47501650,47498286,47495640	47513761,47511226,47510254,47504448,47501851,47498432,47496197	Gene ID= ENSG00000163832.15 TPM= 21.6 Transcript Type= protein_coding
chr3	47495641	47513709	47495641	47513709	-	ENST00000442215.6@ELP6	ENST00000442215.6	protein_coding	47513537,47511148,47504330,47501650,47498286,47495641	47513709,47511226,47504448,47501851,47498432,47496197	Gene ID= ENSG00000163832.15 TPM= 2.92 Transcript Type= nonsense_mediated_decay
chr3	47495644	47497421	47495644	47497421	-	transcript2127.chr3.nnic@NA	transcript2127.chr3.nnic	NA	47495644	47497421	Gene ID= novel_gene_chr3_2128 TPM= 2.34 Transcript Type= NA
chr3	47562239	47580792	47562239	47580792	-	ENST00000383738.6@CSPG5	ENST00000383738.6	protein_coding	47578597,47576833,47572686,47569071,47562239	47580792,47577928,47572874,47569227,47562761	Gene ID= ENSG00000114646.9 TPM= 1.17 Transcript Type= protein_coding
chr3	47562239	47580792	47562239	47580792	-	ENST00000264723.8@CSPG5	ENST00000264723.8	protein_coding	47578597,47576833,47572686,47569152,47562239	47580792,47577928,47572874,47569227,47562761	Gene ID= ENSG00000114646.9 TPM= 2.34 Transcript Type= protein_coding
chr3	47678493	47781928	47678493	47781928	-	transcript2143.chr3.nic@SMARCC1	transcript2143.chr3.nic	protein_coding	47781603,47772817,47745908,47738029,47736034,47729025,47720666,47714415,47710683,47706409,47701278,47693241,47689387,47686049,47678493	47781928,47772936,47745993,47738110,47736126,47729094,47720735,47714490,47710808,47706530,47701402,47693300,47689424,47686170,47680508	Gene ID= ENSG00000173473.10 TPM= 7.01 Transcript Type= NA
chr3	47802928	47850193	47802928	47850193	+	ENST00000445061.5@DHX30	ENST00000445061.5	protein_coding	47802928,47805326,47810657,47818022,47827347,47829024,47840877,47841617,47843106,47845700,47846165,47847273,47847432,47847781,47848180,47848469,47848624,47848920,47849192,47849451,47849630,47849867	47803212,47805420,47810711,47818117,47827477,47829134,47841178,47841737,47843255,47845852,47847001,47847348,47847536,47847956,47848386,47848550,47848817,47849079,47849349,47849554,47849769,47850193	Gene ID= ENSG00000132153.14 TPM= 40.48 Transcript Type= protein_coding
chr3	47803131	47850193	47803131	47850193	+	transcript2154.chr3.nic@DHX30	transcript2154.chr3.nic	protein_coding	47803131,47805326,47810657,47818022,47827347,47829024,47840877,47841617,47843106,47845700,47846165,47847273,47847432,47847781,47848180,47848469,47848624,47848920,47849451,47849630,47849867	47803212,47805420,47810711,47818117,47827477,47829134,47841178,47841737,47843255,47845852,47847001,47847348,47847536,47847956,47848386,47848550,47848817,47849349,47849554,47849769,47850193	Gene ID= ENSG00000132153.14 TPM= 7.39 Transcript Type= NA
chr3	47802909	47816972	47802909	47816972	+	ENST00000472718.5@DHX30	ENST00000472718.5	protein_coding	47802909,47805326,47810657,47815963	47803212,47805420,47810711,47816972	Gene ID= ENSG00000132153.14 TPM= 4.67 Transcript Type= retained_intron
chr3	47803134	47850192	47803134	47850192	+	ENST00000395745.6@DHX30	ENST00000395745.6	protein_coding	47803134,47805326,47810657,47818022,47819236,47827347,47829024,47840877,47841617,47843106,47845700,47846165,47847273,47847432,47847781,47848180,47848469,47848624,47848920,47849192,47849451,47849630,47849867	47803212,47805420,47810711,47818117,47819264,47827477,47829134,47841178,47841737,47843255,47845852,47847001,47847348,47847536,47847956,47848386,47848550,47848817,47849079,47849349,47849554,47849769,47850192	Gene ID= ENSG00000132153.14 TPM= 22.57 Transcript Type= nonsense_mediated_decay
chr3	47825028	47850187	47825028	47850187	+	ENST00000457607.1@DHX30	ENST00000457607.1	protein_coding	47825028,47827347,47829024,47840877,47841617,47843106,47845700,47846165,47847273,47847432,47847781,47848180,47848469,47848624,47848920,47849192,47849451,47849630,47849867	47825247,47827477,47829134,47841178,47841737,47843255,47845852,47847001,47847348,47847536,47847956,47848386,47848550,47848817,47849079,47849349,47849554,47849769,47850187	Gene ID= ENSG00000132153.14 TPM= 115.59 Transcript Type= protein_coding
chr3	47851868	48089272	47851868	48089272	-	ENST00000360240.10@MAP4	ENST00000360240.10	protein_coding	48088773,47998638,47977865,47928228,47921765,47918719,47915951,47914817,47877417,47875685,47871917,47871227,47870813,47869214,47867246,47857431,47855248,47853163,47851868	48089272,47998879,47977933,47928350,47921878,47918841,47917174,47914939,47877523,47875900,47872100,47871286,47871105,47869327,47867338,47857512,47855360,47853352,47853039	Gene ID= ENSG00000047849.21 TPM= 26.85 Transcript Type= protein_coding
chr3	47850694	47853797	47850694	47853797	-	transcript2191.chr3.nnic@NA	transcript2191.chr3.nnic	NA	47850694	47853797	Gene ID= novel_gene_chr3_2192 TPM= 140.11 Transcript Type= NA
chr3	47890695	47895033	47890695	47895033	+	transcript2189.chr3.nnic@NA	transcript2189.chr3.nnic	NA	47890695	47895033	Gene ID= novel_gene_chr3_2190 TPM= 3.5 Transcript Type= NA
chr3	48157146	48188356	48157146	48188356	-	ENST00000302506.7@CDC25A	ENST00000302506.7	protein_coding	48187778,48186703,48184653,48183800,48182929,48180721,48177854,48177371,48174284,48167846,48165831,48165636,48164307,48159344,48157146	48188356,48186779,48184695,48183836,48183030,48180840,48177988,48177442,48174457,48167944,48165893,48165734,48164437,48159455,48159085	Gene ID= ENSG00000164045.11 TPM= 1.17 Transcript Type= protein_coding
chr3	48223347	48225491	48223347	48225491	+	ENST00000296435.2@CAMP	ENST00000296435.2	protein_coding	48223347,48224354,48224603,48225293	48223712,48224461,48224674,48225491	Gene ID= ENSG00000164047.4 TPM= 2.34 Transcript Type= protein_coding
chr3	48255488	48270987	48255488	48270987	+	transcript2197.chr3.nnic@ZNF589	transcript2197.chr3.nnic	protein_coding	48255488,48260813,48267915	48257022,48260939,48270987	Gene ID= ENSG00000164048.13 TPM= 7.01 Transcript Type= NA
chr3	48241100	48270987	48241100	48270987	+	ENST00000354698.7@ZNF589	ENST00000354698.7	protein_coding	48241100,48247625,48260813,48267915	48241214,48247677,48260939,48270987	Gene ID= ENSG00000164048.13 TPM= 24.52 Transcript Type= protein_coding
chr3	48293997	48301408	48293997	48301408	-	transcript2211.chr3.nic@NME6	transcript2211.chr3.nic	protein_coding	48301296,48298427,48296727,48295075,48293997	48301408,48298523,48296829,48295235,48294803	Gene ID= ENSG00000172113.8 TPM= 4.67 Transcript Type= NA
chr3	48403854	48430051	48403854	48430051	-	ENST00000296440.10@PLXNB1	ENST00000296440.10	protein_coding	48430008,48425281,48423505,48422765,48422331,48422105,48421674,48421228,48420848,48420665,48419577,48419244,48418917,48418449,48418191,48417911,48416346,48416031,48415583,48415176,48414799,48413895,48413670,48413069,48412742,48412442,48412238,48411863,48410868,48410455,48410296,48409905,48409571,48409329,48407027,48406823,48405724,48403854	48430051,48425333,48424617,48422947,48422459,48422205,48421806,48421384,48420956,48420773,48420257,48419366,48419039,48418542,48418363,48418062,48416451,48416167,48415759,48415347,48415041,48414071,48413818,48413169,48412959,48412620,48412304,48412009,48411036,48410558,48410380,48410077,48409731,48409476,48407091,48406898,48405798,48404590	Gene ID= ENSG00000164050.12 TPM= 53.71 Transcript Type= protein_coding
chr3	48432170	48440119	48432170	48440119	-	ENST00000412398.6@CCDC51	ENST00000412398.6	protein_coding	48440096,48434817,48433707,48432170	48440119,48435015,48433871,48433166	Gene ID= ENSG00000164051.13 TPM= 1.95 Transcript Type= protein_coding
chr3	48432170	48440065	48432170	48440065	-	ENST00000395694.6@CCDC51	ENST00000395694.6	protein_coding	48439988,48434817,48433707,48432170	48440065,48435136,48433871,48433166	Gene ID= ENSG00000164051.13 TPM= 10.12 Transcript Type= protein_coding
chr3	48432164	48440081	48432164	48440081	-	ENST00000447018.5@CCDC51	ENST00000447018.5	protein_coding	48439988,48434817,48433707,48432164	48440081,48435015,48433871,48433166	Gene ID= ENSG00000164051.13 TPM= 10.12 Transcript Type= protein_coding
chr3	48440257	48444208	48440257	48444208	+	ENST00000438607.2@TMA7	ENST00000438607.2	protein_coding	48440257,48440403,48440541,48443848	48440312,48440458,48440628,48444208	Gene ID= ENSG00000232112.3 TPM= 78.23 Transcript Type= protein_coding
chr3	48446733	48465655	48446733	48465655	+	ENST00000320211.8@ATRIP	ENST00000320211.8	protein_coding	48446733,48450037,48451729,48454300,48457259,48459359,48459787,48460110,48463745,48464041,48464582,48464831,48465487	48447092,48450170,48451899,48454418,48457416,48459454,48459916,48460799,48463881,48464132,48464662,48465083,48465655	Gene ID= ENSG00000164053.19 TPM= 9.92 Transcript Type= protein_coding
chr3	48446733	48465655	48446733	48465655	+	ENST00000346691.9@ATRIP	ENST00000346691.9	protein_coding	48446733,48450037,48451729,48454300,48457259,48459359,48459787,48460110,48463745,48464041,48464831,48465487	48447092,48450170,48451899,48454418,48457416,48459454,48459916,48460799,48463881,48464132,48465083,48465655	Gene ID= ENSG00000164053.19 TPM= 1.75 Transcript Type= protein_coding
chr3	48465847	48467645	48465847	48467645	+	transcript2263.chr3.nic@AC134772.2	transcript2263.chr3.nic	protein_coding	48465847,48466630	48466309,48467645	Gene ID= ENSG00000282827.2 TPM= 12.84 Transcript Type= NA
chr3	48467360	48470948	48467360	48470948	+	transcript2266.chr3.nnic@NA	transcript2266.chr3.nnic	NA	48467360	48470948	Gene ID= novel_gene_chr3_2267 TPM= 4.67 Transcript Type= NA
chr3	48467798	48504431	48467798	48504431	-	ENST00000296444.6@SHISA5	ENST00000296444.6	protein_coding	48504019,48501137,48479177,48469728,48469361,48467798	48504431,48501293,48479257,48469843,48469573,48469186	Gene ID= ENSG00000164054.15 TPM= 218.63 Transcript Type= protein_coding
chr3	48467877	48504795	48467877	48504795	-	ENST00000442747.5@SHISA5	ENST00000442747.5	protein_coding	48504423,48501137,48479177,48469728,48469361,48467877	48504795,48501293,48479257,48469843,48469573,48469186	Gene ID= ENSG00000164054.15 TPM= 10.06 Transcript Type= protein_coding
chr3	48467870	48504826	48467870	48504826	-	ENST00000444115.5@SHISA5	ENST00000444115.5	protein_coding	48504630,48501137,48479177,48469728,48469361,48467870	48504826,48501293,48479257,48469843,48469573,48469186	Gene ID= ENSG00000164054.15 TPM= 7.33 Transcript Type= protein_coding
chr3	48467876	48473208	48467876	48473208	-	ENST00000426002.5@SHISA5	ENST00000426002.5	protein_coding	48473010,48469728,48469361,48467876	48473208,48469843,48469573,48469186	Gene ID= ENSG00000164054.15 TPM= 204.47 Transcript Type= protein_coding
chr3	48467876	48473103	48467876	48473103	-	ENST00000494854.5@SHISA5	ENST00000494854.5	protein_coding	48473010,48469728,48467876	48473103,48469843,48469573	Gene ID= ENSG00000164054.15 TPM= 2.63 Transcript Type= retained_intron
chr3	48467911	48504129	48467911	48504129	-	ENST00000443308.6@SHISA5	ENST00000443308.6	protein_coding	48504019,48501158,48479177,48469728,48469361,48467911	48504129,48501293,48479257,48469843,48469573,48469186	Gene ID= ENSG00000164054.15 TPM= 174.26 Transcript Type= protein_coding
chr3	48517684	48556890	48517684	48556890	-	ENST00000232375.7@PFKFB4	ENST00000232375.7	protein_coding	48556681,48550118,48549864,48543580,48539697,48539254,48538498,48536256,48535512,48525565,48523701,48523537,48521986,48517684	48556890,48550234,48549960,48543646,48539771,48539310,48538619,48536463,48535658,48525669,48523830,48523599,48522050,48519806	Gene ID= ENSG00000114268.11 TPM= 10.51 Transcript Type= protein_coding
chr3	48599003	48610037	48599003	48610037	-	ENST00000203407.5@UQCRC1	ENST00000203407.5	protein_coding	48609552,48609162,48605770,48604651,48604233,48603564,48601352,48600975,48600680,48600482,48600063,48599635,48599003	48610037,48609302,48605856,48604780,48604431,48603643,48601467,48601118,48600840,48600567,48600151,48599710,48599192	Gene ID= ENSG00000010256.10 TPM= 421.89 Transcript Type= protein_coding
chr3	48599002	48609668	48599002	48609668	-	transcript2277.chr3.nic@UQCRC1	transcript2277.chr3.nic	protein_coding	48609552,48609162,48605770,48604651,48604233,48603564,48601352,48600680,48600482,48600063,48599635,48599002	48609668,48609302,48605856,48604780,48604431,48603643,48601467,48601118,48600567,48600151,48599710,48599192	Gene ID= ENSG00000010256.10 TPM= 26.07 Transcript Type= NA
chr3	48625723	48635483	48625723	48635483	-	ENST00000420764.6@SLC26A6	ENST00000420764.6	protein_coding	48635371,48633477,48633251,48632974,48632245,48631880,48631649,48631224,48630993,48630607,48630438,48630062,48629872,48629642,48628622,48628434,48627946,48626876,48626631,48626218,48625723	48635483,48633635,48633390,48633084,48632396,48632044,48631801,48631306,48631140,48630720,48630515,48630157,48629978,48629711,48628714,48628541,48628038,48627052,48626685,48626354,48626000	Gene ID= ENSG00000225697.12 TPM= 14.01 Transcript Type= protein_coding
chr3	48625723	48635480	48625723	48635480	-	transcript2306.chr3.nic@SLC26A6	transcript2306.chr3.nic	protein_coding	48635371,48633477,48633251,48632974,48632245,48631880,48631649,48631253,48630993,48630607,48630438,48630062,48629872,48629642,48628622,48628434,48627946,48626876,48626631,48626218,48625723	48635480,48633635,48633390,48633084,48632396,48632044,48631801,48631306,48631140,48630720,48630515,48630157,48629978,48629711,48628714,48628541,48628038,48627052,48626685,48626354,48626000	Gene ID= ENSG00000225697.12 TPM= 4.67 Transcript Type= NA
chr3	48625723	48635480	48625723	48635480	-	transcript2312.chr3.nic@SLC26A6	transcript2312.chr3.nic	protein_coding	48635371,48633477,48633251,48632974,48631880,48631649,48631224,48630993,48630607,48630438,48630062,48629872,48629642,48628622,48628434,48627946,48626876,48626631,48626218,48625723	48635480,48633635,48633390,48633084,48632044,48631801,48631306,48631140,48630720,48630515,48630157,48629978,48629711,48628714,48628541,48628038,48627055,48626685,48626354,48626000	Gene ID= ENSG00000225697.12 TPM= 4.09 Transcript Type= NA
chr3	48625723	48635480	48625723	48635480	-	transcript2313.chr3.nic@SLC26A6	transcript2313.chr3.nic	protein_coding	48635371,48633477,48633251,48632974,48632245,48631880,48631649,48631224,48630993,48630607,48630438,48630062,48629642,48628622,48628434,48627946,48626876,48626631,48626218,48625723	48635480,48633635,48633390,48633084,48632396,48632044,48631801,48631306,48631140,48630720,48630515,48630157,48629978,48628714,48628541,48628038,48627055,48626685,48626354,48626000	Gene ID= ENSG00000225697.12 TPM= 2.92 Transcript Type= NA
chr3	48636469	48662915	48636469	48662915	-	ENST00000164024.4@CELSR3	ENST00000164024.4	protein_coding	48658887,48656698,48656140,48655736,48655306,48655044,48654289,48653878,48653619,48653002,48652437,48651877,48651577,48651359,48650892,48650480,48649121,48648719,48648266,48647841,48646763,48646090,48645742,48645443,48645035,48644716,48644216,48643554,48642967,48642736,48642358,48641851,48641324,48639674,48636469	48662915,48657348,48656365,48655851,48655394,48655201,48654452,48654003,48653788,48653187,48652553,48652048,48651718,48651479,48651075,48650581,48649215,48648928,48648461,48647996,48646928,48646257,48645868,48645649,48645209,48644828,48644295,48643677,48643083,48642884,48642467,48642009,48641524,48640559,48638232	Gene ID= ENSG00000008300.16 TPM= 7.01 Transcript Type= protein_coding
chr3	48673844	48685927	48673844	48685927	-	ENST00000294129.6@NCKIPSD	ENST00000294129.6	protein_coding	48685637,48682903,48682348,48682045,48681287,48680059,48679801,48679575,48679377,48679055,48678877,48678564,48673844	48685927,48683012,48682552,48682156,48681780,48680229,48679887,48679713,48679457,48679183,48678969,48678736,48674747	Gene ID= ENSG00000213672.7 TPM= 18.97 Transcript Type= protein_coding
chr3	48673844	48685932	48673844	48685932	-	transcript2337.chr3.nic@NCKIPSD	transcript2337.chr3.nic	protein_coding	48685637,48682903,48682348,48682045,48680059,48679801,48679575,48679377,48679055,48678877,48678564,48673844	48685932,48683012,48682552,48682156,48681780,48679887,48679713,48679457,48679183,48678969,48678736,48674747	Gene ID= ENSG00000213672.7 TPM= 2.63 Transcript Type= NA
chr3	48673844	48685932	48673844	48685932	-	transcript2338.chr3.nic@NCKIPSD	transcript2338.chr3.nic	protein_coding	48685637,48682903,48682348,48682045,48681287,48680059,48679801,48679575,48679377,48678877,48678564,48673844	48685932,48683012,48682552,48682135,48681780,48680229,48679887,48679713,48679457,48679183,48678736,48674747	Gene ID= ENSG00000213672.7 TPM= 2.34 Transcript Type= NA
chr3	48673844	48685884	48673844	48685884	-	ENST00000416649.6@NCKIPSD	ENST00000416649.6	protein_coding	48685637,48682903,48682348,48682045,48681287,48680059,48679801,48679575,48679377,48679055,48678877,48678564,48673844	48685884,48683012,48682552,48682135,48681780,48680229,48679887,48679713,48679457,48679183,48678969,48678736,48674747	Gene ID= ENSG00000213672.7 TPM= 20.14 Transcript Type= protein_coding
chr3	48688003	48717221	48688003	48717221	-	transcript2345.chr3.nic@IP6K2	transcript2345.chr3.nic	protein_coding	48717157,48715315,48692954,48691307,48689538,48688003	48717221,48715527,48695421,48691482,48689713,48688773	Gene ID= ENSG00000068745.14 TPM= 8.17 Transcript Type= NA
chr3	48688003	48695520	48688003	48695520	-	transcript2347.chr3.nic@IP6K2	transcript2347.chr3.nic	protein_coding	48695090,48692954,48691307,48689538,48688003	48695520,48693179,48691482,48689713,48688773	Gene ID= ENSG00000068745.14 TPM= 4.67 Transcript Type= NA
chr3	48688003	48694776	48688003	48694776	-	transcript2350.chr3.nnic@IP6K2	transcript2350.chr3.nnic	protein_coding	48692185,48691307,48689538,48688003	48694776,48691555,48689713,48688773	Gene ID= ENSG00000068745.14 TPM= 2.34 Transcript Type= NA
chr3	48693453	48717278	48693453	48717278	-	ENST00000432678.6@IP6K2	ENST00000432678.6	protein_coding	48717157,48695090,48694459,48693453	48717278,48695421,48694525,48694240	Gene ID= ENSG00000068745.14 TPM= 1.75 Transcript Type= protein_coding
chr3	48688003	48717250	48688003	48717250	-	ENST00000328631.9@IP6K2	ENST00000328631.9	protein_coding	48717157,48695090,48692954,48691307,48689538,48688003	48717250,48695421,48693179,48691482,48689713,48688773	Gene ID= ENSG00000068745.14 TPM= 53.71 Transcript Type= protein_coding
chr3	48693448	48717216	48693448	48717216	-	ENST00000340879.8@IP6K2	ENST00000340879.8	protein_coding	48717157,48695090,48693448	48717216,48695421,48694240	Gene ID= ENSG00000068745.14 TPM= 1.75 Transcript Type= protein_coding
chr3	48759386	48759685	48759386	48759685	-	transcript2371.chr3.nnic@NA	transcript2371.chr3.nnic	NA	48759386	48759685	Gene ID= novel_gene_chr3_2372 TPM= 2.34 Transcript Type= NA
chr3	48856934	48898892	48856934	48898892	-	transcript2373.chr3.nnic@SLC25A20	transcript2373.chr3.nnic	protein_coding	48898690,48891980,48883997,48879358,48862542,48859555,48859092,48858507,48857649,48856934	48898892,48892072,48884124,48879448,48862659,48859627,48859201,48858631,48857772,48857489	Gene ID= ENSG00000178537.9 TPM= 4.29 Transcript Type= NA
chr3	48856931	48898885	48856931	48898885	-	transcript2376.chr3.nic@SLC25A20	transcript2376.chr3.nic	protein_coding	48898690,48891980,48883997,48879358,48862542,48858507,48856931	48898885,48892072,48884124,48879448,48862659,48859627,48857772	Gene ID= ENSG00000178537.9 TPM= 7.01 Transcript Type= NA
chr3	48856927	48898905	48856927	48898905	-	transcript2377.chr3.nnic@SLC25A20	transcript2377.chr3.nnic	protein_coding	48898690,48891980,48883997,48879358,48862542,48856927	48898905,48892072,48884124,48879448,48862659,48857772	Gene ID= ENSG00000178537.9 TPM= 5.45 Transcript Type= NA
chr3	48856936	48898993	48856936	48898993	-	ENST00000319017.4@SLC25A20	ENST00000319017.4	protein_coding	48898690,48891980,48883997,48879358,48862542,48859555,48859092,48858507,48856936	48898993,48892072,48884124,48879448,48862659,48859627,48859201,48858631,48857772	Gene ID= ENSG00000178537.9 TPM= 48.65 Transcript Type= protein_coding
chr3	48918842	48985541	48918842	48985541	+	transcript2386.chr3.nic@ARIH2	transcript2386.chr3.nic	protein_coding	48918842,48922748,48924718,48927462,48945136,48961612,48964919,48967125,48968534,48970595,48973699,48974817,48974958,48979482,48980353,48981660,48982896,48983199	48918998,48922811,48924839,48927813,48945181,48961679,48964982,48967275,48968655,48970704,48973816,48974867,48974979,48979633,48980496,48981728,48982979,48985541	Gene ID= ENSG00000177479.19 TPM= 8.58 Transcript Type= NA
chr3	48918851	48983679	48918851	48983679	+	transcript2395.chr3.nic@ARIH2	transcript2395.chr3.nic	protein_coding	48918851,48922748,48924718,48945136,48961612,48964919,48967125,48968534,48970595,48973699,48974817,48974958,48979482,48980353,48981660,48982896,48983199	48918998,48922811,48927813,48945181,48961679,48964982,48967275,48968655,48970704,48973816,48974867,48974979,48979633,48980496,48981728,48982979,48983679	Gene ID= ENSG00000177479.19 TPM= 19.85 Transcript Type= NA
chr3	48918842	48985541	48918842	48985541	+	transcript2399.chr3.nic@ARIH2	transcript2399.chr3.nic	protein_coding	48918842,48922748,48927462,48945136,48961612,48964919,48967125,48968534,48970595,48973699,48974817,48974958,48979482,48980353,48981660,48982896,48983199	48918998,48922811,48927813,48945181,48961679,48964982,48967275,48968655,48970704,48973816,48974867,48974979,48979633,48980496,48981728,48982979,48985541	Gene ID= ENSG00000177479.19 TPM= 9.75 Transcript Type= NA
chr3	48918844	48985541	48918844	48985541	+	transcript2422.chr3.nic@ARIH2	transcript2422.chr3.nic	protein_coding	48918844,48927462,48961612,48964919,48967125,48968534,48970595,48973699,48974817,48974958,48979482,48980353,48981660,48982896,48983199	48918998,48927813,48961679,48964982,48967275,48968655,48970704,48973816,48974867,48974979,48979633,48980496,48981728,48982979,48985541	Gene ID= ENSG00000177479.19 TPM= 7.41 Transcript Type= NA
chr3	48918850	48928671	48918850	48928671	+	transcript2429.chr3.nic@ARIH2	transcript2429.chr3.nic	protein_coding	48918850,48922748,48924718,48927462	48918998,48922811,48924839,48928671	Gene ID= ENSG00000177479.19 TPM= 12.84 Transcript Type= NA
chr3	48918850	48928674	48918850	48928674	+	transcript2436.chr3.nic@ARIH2	transcript2436.chr3.nic	protein_coding	48918850,48922748,48927462	48918998,48922811,48928674	Gene ID= ENSG00000177479.19 TPM= 7.01 Transcript Type= NA
chr3	48918836	48983620	48918836	48983620	+	ENST00000449376.5@ARIH2	ENST00000449376.5	protein_coding	48918836,48922748,48924718,48927462,48961612,48964919,48967125,48968534,48970595,48973699,48974817,48974958,48979482,48980353,48981660,48982896,48983199	48918998,48922811,48924839,48927813,48961679,48964982,48967275,48968655,48970704,48973816,48974867,48974979,48979633,48980496,48981728,48982979,48983620	Gene ID= ENSG00000177479.19 TPM= 15.18 Transcript Type= protein_coding
chr3	48989886	49007154	48989886	49007154	+	ENST00000383729.8@P4HTM	ENST00000383729.8	protein_coding	48989886,48990833,49001438,49002500,49004098,49004861,49005777,49006064,49006687	48990610,48990914,49001628,49002596,49004260,49005046,49005867,49006187,49007154	Gene ID= ENSG00000178467.17 TPM= 85.91 Transcript Type= protein_coding
chr3	48989908	49007115	48989908	49007115	+	ENST00000472301.5@P4HTM	ENST00000472301.5	protein_coding	48989908,48990833,49001438,49002500,49004098,49004861,49006064,49006687	48990610,48990914,49001628,49002596,49004260,49005867,49006187,49007115	Gene ID= ENSG00000178467.17 TPM= 21.69 Transcript Type= retained_intron
chr3	49007362	49015953	49007362	49015953	+	transcript2522.chr3.nic@WDR6	transcript2522.chr3.nic	protein_coding	49007362,49011635,49014600,49014825	49007531,49014499,49014718,49015953	Gene ID= ENSG00000178252.17 TPM= 21.02 Transcript Type= NA
chr3	49015493	49018590	49015493	49018590	-	transcript2452.chr3.nic@DALRD3	transcript2452.chr3.nic	protein_coding	49018400,49018023,49017613,49017434,49017228,49016774,49016612,49016429,49016158,49015973,49015819,49015493	49018590,49018318,49017869,49017513,49017356,49016847,49016673,49016511,49016340,49016086,49015872,49015707	Gene ID= ENSG00000178149.16 TPM= 4.25 Transcript Type= NA
chr3	49015488	49021365	49015488	49021365	-	transcript2456.chr3.nnic@DALRD3	transcript2456.chr3.nnic	protein_coding	49020846,49017613,49017434,49017228,49016774,49016612,49016429,49016158,49015973,49015804,49015488	49021365,49017869,49017513,49017356,49016847,49016673,49016511,49016340,49016086,49015872,49015707	Gene ID= ENSG00000178149.16 TPM= 2.5 Transcript Type= NA
chr3	49015488	49018590	49015488	49018590	-	transcript2458.chr3.nic@DALRD3	transcript2458.chr3.nic	protein_coding	49018400,49018023,49017613,49017434,49017228,49016774,49016612,49016429,49015973,49015804,49015488	49018590,49018318,49017869,49017513,49017356,49016847,49016673,49016511,49016340,49015872,49015707	Gene ID= ENSG00000178149.16 TPM= 6 Transcript Type= NA
chr3	49015488	49018590	49015488	49018590	-	transcript2464.chr3.nic@DALRD3	transcript2464.chr3.nic	protein_coding	49018400,49018023,49017613,49017228,49016774,49016612,49016429,49015973,49015804,49015488	49018590,49018318,49017869,49017513,49016847,49016673,49016511,49016340,49015872,49015707	Gene ID= ENSG00000178149.16 TPM= 3.67 Transcript Type= NA
chr3	49015488	49018537	49015488	49018537	-	transcript2481.chr3.nic@DALRD3	transcript2481.chr3.nic	protein_coding	49018400,49018023,49017613,49017228,49016774,49016612,49016429,49015804,49015488	49018537,49018213,49017869,49017513,49016847,49016673,49016511,49016340,49015707	Gene ID= ENSG00000178149.16 TPM= 2.5 Transcript Type= NA
chr3	49015488	49018571	49015488	49018571	-	ENST00000341949.8@DALRD3	ENST00000341949.8	protein_coding	49018400,49018023,49017613,49017434,49017228,49016774,49016612,49016429,49016158,49015973,49015804,49015488	49018571,49018318,49017869,49017513,49017356,49016847,49016673,49016511,49016340,49016086,49015872,49015707	Gene ID= ENSG00000178149.16 TPM= 17.09 Transcript Type= protein_coding
chr3	49015488	49018564	49015488	49018564	-	ENST00000441576.6@DALRD3	ENST00000441576.6	protein_coding	49018400,49018023,49017613,49017434,49017228,49016774,49016612,49016429,49016158,49015973,49015804,49015488	49018564,49018318,49017869,49017513,49017356,49016847,49016673,49016511,49016340,49016060,49015872,49015707	Gene ID= ENSG00000178149.16 TPM= 6 Transcript Type= protein_coding
chr3	49021011	49023495	49021011	49023495	+	ENST00000326925.10@NDUFAF3	ENST00000326925.10	protein_coding	49021011,49022346,49022702,49022876,49023056	49022221,49022538,49022768,49022976,49023495	Gene ID= ENSG00000178057.14 TPM= 138.07 Transcript Type= protein_coding
chr3	49021645	49023288	49021645	49023288	+	transcript2526.chr3.nic@NDUFAF3	transcript2526.chr3.nic	protein_coding	49021645,49022346,49022702,49023056	49022221,49022538,49022976,49023288	Gene ID= ENSG00000178057.14 TPM= 3.79 Transcript Type= NA
chr3	49022113	49023287	49022113	49023287	+	ENST00000496152.1@NDUFAF3	ENST00000496152.1	protein_coding	49022113,49022702,49022876,49023056	49022538,49022768,49022976,49023287	Gene ID= ENSG00000178057.14 TPM= 3.79 Transcript Type= retained_intron
chr3	49023664	49028175	49023664	49028175	-	transcript2536.chr3.nnic@NA	transcript2536.chr3.nnic	NA	49023664	49028175	Gene ID= novel_gene_chr3_2537 TPM= 28.02 Transcript Type= NA
chr3	49024325	49029390	49024325	49029390	-	ENST00000326739.8@IMPDH2	ENST00000326739.8	protein_coding	49029253,49028758,49028431,49028248,49027710,49026960,49026687,49026519,49026324,49025126,49024896,49024659,49024495,49024325	49029390,49028806,49028532,49028322,49027916,49027047,49026886,49026609,49026419,49025269,49025040,49024802,49024578,49024404	Gene ID= ENSG00000178035.11 TPM= 164.63 Transcript Type= protein_coding
chr3	49029707	49094363	49029707	49094363	-	ENST00000395443.6@QRICH1	ENST00000395443.6	protein_coding	49093912,49076709,49056862,49047069,49046425,49044390,49033120,49032622,49032183,49029707	49094363,49077038,49057890,49047246,49046579,49044504,49033228,49032773,49032273,49030644	Gene ID= ENSG00000198218.10 TPM= 42.03 Transcript Type= protein_coding
chr3	49029759	49094064	49029759	49094064	-	transcript2484.chr3.nic@QRICH1	transcript2484.chr3.nic	protein_coding	49093912,49076709,49056862,49047069,49046425,49044390,49032622,49032183,49029759	49094064,49077038,49057890,49047246,49046579,49044504,49033228,49032273,49030644	Gene ID= ENSG00000198218.10 TPM= 4.67 Transcript Type= NA
chr3	49045898	49094056	49045898	49094056	-	transcript2528.chr3.nic@QRICH1	transcript2528.chr3.nic	protein_coding	49093912,49076709,49056862,49045898	49094056,49077038,49057890,49047246	Gene ID= ENSG00000198218.10 TPM= 2.34 Transcript Type= NA
chr3	49095932	49105135	49095932	49105135	-	ENST00000306125.11@QARS	ENST00000306125.11	protein_coding	49104617,49104324,49103863,49103631,49103345,49102419,49102205,49101828,49101620,49101355,49100575,49100380,49100190,49099961,49099761,49099510,49099344,49099110,49098885,49098600,49098353,49098192,49097992,49095932	49105135,49104471,49103972,49103706,49103409,49102472,49102265,49101899,49101705,49101441,49100674,49100458,49100298,49100091,49099853,49099647,49099431,49099253,49098989,49098692,49098480,49098258,49098117,49096079	Gene ID= ENSG00000172053.17 TPM= 159.58 Transcript Type= protein_coding
chr3	49095934	49104802	49095934	49104802	-	transcript2550.chr3.nic@QARS	transcript2550.chr3.nic	protein_coding	49104617,49104324,49103863,49103345,49102419,49102205,49101828,49101620,49101355,49100575,49100380,49100190,49099961,49099761,49099510,49099344,49099110,49098885,49098600,49098353,49098192,49097992,49095934	49104802,49104471,49103972,49103706,49102472,49102265,49101899,49101705,49101441,49100674,49100458,49100298,49100091,49099853,49099647,49099431,49099253,49098989,49098692,49098480,49098258,49098117,49096079	Gene ID= ENSG00000172053.17 TPM= 14.79 Transcript Type= NA
chr3	49095939	49104532	49095939	49104532	-	ENST00000464962.6@QARS	ENST00000464962.6	protein_coding	49104324,49103863,49103631,49103345,49102419,49102205,49101828,49101620,49101355,49100575,49100380,49100190,49099961,49099761,49099510,49099344,49099110,49098885,49098600,49098353,49098192,49097992,49095939	49104532,49103972,49103706,49103409,49102472,49102265,49101899,49101705,49101441,49100674,49100458,49100298,49100091,49099853,49099647,49099431,49099253,49098989,49098692,49098480,49098258,49098117,49096079	Gene ID= ENSG00000172053.17 TPM= 8.96 Transcript Type= protein_coding
chr3	49108050	49120934	49108050	49120934	-	transcript2563.chr3.nic@USP19	transcript2563.chr3.nic	protein_coding	49120756,49119022,49117947,49117657,49117437,49117059,49116727,49116451,49116280,49116047,49115724,49115444,49115228,49114959,49114763,49114174,49113992,49112489,49112284,49111911,49111500,49111255,49110950,49110711,49110444,49110184,49108050	49120934,49119281,49118120,49117785,49117570,49117361,49116943,49116607,49116351,49116162,49115944,49115639,49115361,49115117,49114873,49114284,49114093,49112629,49112402,49112048,49111813,49111365,49111166,49110863,49110604,49110362,49108528	Gene ID= ENSG00000172046.18 TPM= 14.01 Transcript Type= NA
chr3	49108050	49120808	49108050	49120808	-	ENST00000417901.5@USP19	ENST00000417901.5	protein_coding	49120756,49119022,49117947,49117657,49117437,49117059,49116727,49116451,49116280,49116047,49115724,49115444,49115228,49114959,49114763,49114174,49113992,49112489,49112284,49111911,49111500,49111255,49110950,49110711,49110444,49110184,49108050	49120808,49119281,49118120,49117830,49117570,49117361,49116943,49116607,49116351,49116162,49115944,49115639,49115361,49115117,49114873,49114284,49114093,49112629,49112402,49112048,49111813,49111365,49111166,49110863,49110604,49110362,49108528	Gene ID= ENSG00000172046.18 TPM= 28.02 Transcript Type= protein_coding
chr3	49121114	49133118	49121114	49133118	-	ENST00000418109.5@LAMB2	ENST00000418109.5	protein_coding	49132955,49132792,49132491,49132270,49132116,49131535,49131379,49130950,49130740,49130231,49129839,49129604,49129245,49129020,49128661,49128458,49126365,49125967,49125747,49125253,49125006,49124701,49124395,49124190,49123728,49123447,49123132,49122704,49122163,49121944,49121684,49121433,49121114	49133118,49132868,49132663,49132405,49132189,49131723,49131442,49131152,49130860,49130419,49130018,49129716,49129324,49129152,49128819,49128585,49126497,49126159,49125890,49125484,49125169,49124925,49124612,49124286,49124100,49123631,49123373,49123052,49122370,49122085,49121860,49121592,49121362	Gene ID= ENSG00000172037.13 TPM= 393.42 Transcript Type= protein_coding
chr3	49121114	49133075	49121114	49133075	-	transcript2597.chr3.nic@LAMB2	transcript2597.chr3.nic	protein_coding	49132792,49132491,49132270,49132116,49131535,49131379,49130950,49130740,49130231,49129839,49129604,49129245,49129020,49128661,49128458,49126365,49125967,49125747,49125253,49125006,49124701,49124395,49124190,49123728,49123447,49122163,49121944,49121684,49121433,49121114	49133075,49132663,49132405,49132189,49131723,49131442,49131152,49130860,49130419,49130018,49129716,49129324,49129152,49128819,49128585,49126497,49126159,49125890,49125484,49125169,49124925,49124612,49124286,49124100,49123631,49123373,49122085,49121860,49121592,49121362	Gene ID= ENSG00000172037.13 TPM= 52.48 Transcript Type= NA
chr3	49121115	49121596	49121115	49121596	-	ENST00000484713.1@LAMB2	ENST00000484713.1	protein_coding	49121433,49121115	49121596,49121362	Gene ID= ENSG00000172037.13 TPM= 1.17 Transcript Type= retained_intron
chr3	49121133	49133020	49121133	49133020	-	ENST00000305544.8@LAMB2	ENST00000305544.8	protein_coding	49132792,49132491,49132270,49132116,49131535,49131379,49130950,49130740,49130231,49129839,49129604,49129245,49129020,49128661,49128458,49126365,49125967,49125747,49125253,49125006,49124701,49124395,49124190,49123728,49123447,49123132,49122704,49122163,49121944,49121684,49121433,49121133	49133020,49132663,49132405,49132189,49131723,49131442,49131152,49130860,49130419,49130018,49129716,49129324,49129152,49128819,49128585,49126497,49126159,49125890,49125484,49125169,49124925,49124612,49124286,49124100,49123631,49123373,49123052,49122370,49122085,49121860,49121592,49121362	Gene ID= ENSG00000172037.13 TPM= 183.84 Transcript Type= protein_coding
chr3	49121114	49121976	49121114	49121976	-	ENST00000467506.5@LAMB2	ENST00000467506.5	protein_coding	49121944,49121684,49121114	49121976,49121860,49121592	Gene ID= ENSG00000172037.13 TPM= 4.67 Transcript Type= retained_intron
chr3	49171563	49176486	49171563	49176486	+	transcript2606.chr3.nic@KLHDC8B	transcript2606.chr3.nic	protein_coding	49171563,49172636,49174239,49174742,49175062,49175605	49171685,49172801,49174403,49174966,49175163,49176486	Gene ID= ENSG00000185909.14 TPM= 3.5 Transcript Type= NA
chr3	49171563	49176475	49171563	49176475	+	transcript2610.chr3.nic@KLHDC8B	transcript2610.chr3.nic	protein_coding	49171563,49172636	49171685,49176475	Gene ID= ENSG00000185909.14 TPM= 4.67 Transcript Type= NA
chr3	49171611	49176486	49171611	49176486	+	ENST00000332780.3@KLHDC8B	ENST00000332780.3	protein_coding	49171611,49172636,49174239,49174742,49175062,49175605	49171685,49173145,49174403,49174966,49175163,49176486	Gene ID= ENSG00000185909.14 TPM= 31.53 Transcript Type= protein_coding
chr3	49277831	49340033	49277831	49340033	-	ENST00000351842.8@USP4	ENST00000351842.8	protein_coding	49339924,49335469,49327686,49325719,49324894,49324702,49310620,49305715,49302384,49300467,49298552,49297870,49294407,49292510,49286098,49284849,49284466,49283987,49280744,49278814,49277831	49340033,49335596,49327816,49325845,49325039,49324763,49310737,49305888,49302542,49300691,49298635,49297964,49294598,49292598,49286325,49284919,49284584,49284136,49280847,49278902,49278451	Gene ID= ENSG00000114316.12 TPM= 3.5 Transcript Type= protein_coding
chr3	49278106	49340071	49278106	49340071	-	ENST00000265560.8@USP4	ENST00000265560.8	protein_coding	49339924,49335469,49327686,49325719,49324894,49324702,49311514,49310620,49305715,49302384,49300467,49298552,49297870,49294407,49292510,49286098,49284849,49284466,49283987,49280744,49278814,49278106	49340071,49335596,49327816,49325845,49325039,49324763,49311654,49310737,49305888,49302542,49300691,49298635,49297964,49294598,49292598,49286325,49284919,49284584,49284136,49280847,49278902,49278451	Gene ID= ENSG00000114316.12 TPM= 33.86 Transcript Type= protein_coding
chr3	49311785	49340036	49311785	49340036	-	ENST00000416417.5@USP4	ENST00000416417.5	protein_coding	49339924,49335469,49327686,49325719,49324894,49324702,49311785	49340036,49335596,49327816,49325845,49325039,49324763,49312613	Gene ID= ENSG00000114316.12 TPM= 1.17 Transcript Type= protein_coding
chr3	49357178	49358323	49357178	49358323	-	transcript2668.chr3.nnic@GPX1	transcript2668.chr3.nnic	protein_coding	49358165,49357178	49358323,49357747	Gene ID= ENSG00000233276.3 TPM= 73.56 Transcript Type= NA
chr3	49357178	49358283	49357178	49358283	-	ENST00000419349.1@GPX1	ENST00000419349.1	protein_coding	49357178	49358283	Gene ID= ENSG00000233276.3 TPM= 7.01 Transcript Type= protein_coding
chr3	49359145	49411743	49359145	49411743	-	transcript2710.chr3.nnic@RHOA	transcript2710.chr3.nnic	protein_coding	49411323,49375434,49368428,49362496,49359145	49411743,49375591,49368548,49362626,49360382	Gene ID= ENSG00000067560.10 TPM= 60.71 Transcript Type= NA
chr3	49412206	49416475	49412206	49416475	+	ENST00000273590.3@TCTA	ENST00000273590.3	protein_coding	49412206,49413056,49414820	49412640,49413110,49416475	Gene ID= ENSG00000145022.4 TPM= 80.56 Transcript Type= protein_coding
chr3	49416775	49422753	49416775	49422753	-	ENST00000273588.8@AMT	ENST00000273588.8	protein_coding	49422361,49422104,49421492,49420211,49419710,49419260,49418971,49417818,49416775	49422753,49422271,49421572,49420342,49419788,49419405,49419151,49417973,49417718	Gene ID= ENSG00000145020.15 TPM= 7.01 Transcript Type= protein_coding
chr3	49416824	49422458	49416824	49422458	-	ENST00000637291.1@AMT	ENST00000637291.1	protein_coding	49422361,49422104,49421492,49419260,49418971,49417818,49416824	49422458,49422271,49421572,49420342,49419151,49417973,49417718	Gene ID= ENSG00000145020.15 TPM= 1.17 Transcript Type= retained_intron
chr3	49416824	49422460	49416824	49422460	-	ENST00000637994.1@AMT	ENST00000637994.1	protein_coding	49422361,49422104,49421492,49419710,49418971,49417818,49416824	49422460,49422271,49421572,49420342,49419405,49417973,49417718	Gene ID= ENSG00000145020.15 TPM= 1.17 Transcript Type= retained_intron
chr3	49416778	49422469	49416778	49422469	-	ENST00000465925.6@AMT	ENST00000465925.6	protein_coding	49422361,49422104,49418971,49417818,49416778	49422469,49422271,49421572,49417973,49417718	Gene ID= ENSG00000145020.15 TPM= 1.17 Transcript Type= retained_intron
chr3	49416778	49429326	49416778	49429326	-	transcript2684.chr3.nnic@AC104452.1	transcript2684.chr3.nnic	protein_coding	49429108,49426339,49422104,49421492,49420211,49419710,49419260,49418971,49417818,49416778	49429326,49426428,49423538,49421572,49420342,49419788,49419405,49419151,49417973,49417718	Gene ID= ENSG00000283189.2 TPM= 2.34 Transcript Type= NA
chr3	49422946	49429326	49422946	49429326	-	transcript2693.chr3.nnic@AC104452.1	transcript2693.chr3.nnic	protein_coding	49429108,49426252,49425883,49425367,49424949,49424088,49422946	49429326,49426428,49425996,49425438,49425053,49424874,49423563	Gene ID= ENSG00000283189.2 TPM= 2.34 Transcript Type= NA
chr3	49422946	49429326	49422946	49429326	-	ENST00000273598.7@NICN1	ENST00000273598.7	protein_coding	49429108,49426252,49425883,49425367,49424949,49422946	49429326,49426428,49425996,49425438,49425053,49424874	Gene ID= ENSG00000145029.13 TPM= 1.17 Transcript Type= protein_coding
chr3	49422947	49429288	49422947	49429288	-	ENST00000615713.4@NICN1	ENST00000615713.4	protein_coding	49429108,49426252,49425883,49425367,49424949,49424162,49422947	49429288,49426428,49425996,49425438,49425053,49424874,49423505	Gene ID= ENSG00000145029.13 TPM= 1.17 Transcript Type= protein_coding
chr3	49422993	49429308	49422993	49429308	-	ENST00000423832.5@NICN1	ENST00000423832.5	protein_coding	49429108,49426252,49425883,49425367,49424949,49424075,49422993	49429308,49426428,49425996,49425438,49425053,49424874,49423563	Gene ID= ENSG00000145029.13 TPM= 5.84 Transcript Type= nonsense_mediated_decay
chr3	49470132	49535615	49470132	49535615	+	ENST00000308775.6@DAG1	ENST00000308775.6	protein_coding	49470132,49510419,49530797	49470433,49510819,49535615	Gene ID= ENSG00000173402.11 TPM= 63.05 Transcript Type= protein_coding
chr3	49674002	49683963	49674002	49683963	+	ENST00000296456.9@APEH	ENST00000296456.9	protein_coding	49674002,49674489,49675183,49675694,49675891,49676056,49676378,49676609,49676777,49676903,49677573,49678852,49679593,49680541,49681101,49681722,49681887,49682348,49682546,49682843,49683040,49683237	49674413,49674621,49675309,49675787,49675966,49676219,49676515,49676700,49676817,49677024,49677633,49678949,49679644,49680629,49681239,49681805,49681967,49682436,49682736,49682945,49683146,49683963	Gene ID= ENSG00000164062.12 TPM= 4.67 Transcript Type= protein_coding
chr3	49673981	49683500	49673981	49683500	+	transcript2751.chr3.nic@APEH	transcript2751.chr3.nic	protein_coding	49673981,49674489,49675694,49675891,49676056,49676378,49676609,49676777,49676903,49677573,49678852,49679593,49680541,49681101,49681722,49681887,49682348,49682546,49682843,49683040,49683237	49674413,49674621,49675787,49675966,49676219,49676515,49676700,49676817,49677024,49677633,49678949,49679644,49680629,49681239,49681805,49681967,49682436,49682736,49682945,49683146,49683500	Gene ID= ENSG00000164062.12 TPM= 5.84 Transcript Type= NA
chr3	49674351	49683500	49674351	49683500	+	transcript2752.chr3.nic@APEH	transcript2752.chr3.nic	protein_coding	49674351,49675183,49675694,49675891,49676056,49676378,49676609,49676777,49676903,49677573,49678852,49679593,49680541,49681101,49681722,49681887,49682348,49682546,49682843,49683040,49683237	49674621,49675309,49675787,49675966,49676219,49676515,49676700,49676817,49677024,49677633,49678949,49679644,49680629,49681239,49681805,49681967,49682436,49682736,49682945,49683146,49683500	Gene ID= ENSG00000164062.12 TPM= 8.17 Transcript Type= NA
chr3	49689499	49721527	49689499	49721527	+	ENST00000327697.10@RNF123	ENST00000327697.10	protein_coding	49689499,49691130,49691425,49697143,49697363,49697885,49698052,49698440,49698755,49698980,49699468,49699668,49700227,49700472,49700636,49701491,49701811,49702083,49702334,49702633,49703427,49704650,49704984,49705534,49705982,49706791,49712479,49713513,49713738,49713910,49714090,49715575,49715822,49716102,49716393,49720511,49720800,49721020,49721185	49689606,49691247,49691509,49697222,49697457,49697939,49698137,49698526,49698822,49699105,49699582,49699772,49700352,49700564,49700709,49701608,49701910,49702144,49702405,49702753,49703528,49704756,49705182,49705679,49706065,49706898,49712656,49713587,49713825,49713997,49714174,49715714,49716010,49716177,49716477,49720653,49720894,49721105,49721527	Gene ID= ENSG00000164068.15 TPM= 32.69 Transcript Type= protein_coding
chr3	49689599	49721529	49689599	49721529	+	transcript2766.chr3.nic@RNF123	transcript2766.chr3.nic	protein_coding	49689599,49691130,49691425,49697143,49697363,49697885,49698052,49698440,49698755,49698980,49699468,49699668,49700227,49700472,49700636,49701491,49701811,49702083,49702334,49702633,49703427,49704650,49704984,49705534,49705982,49706791,49712479,49713513,49713738,49713910,49714090,49715575,49715822,49716102,49716393,49720511,49720800,49721020,49721185	49689822,49691247,49691509,49697222,49697457,49697939,49698137,49698526,49698822,49699105,49699582,49699772,49700352,49700564,49700709,49701608,49701910,49702144,49702405,49702753,49703528,49704756,49705182,49705679,49706065,49706898,49712656,49713587,49713825,49713997,49714174,49715714,49716010,49716177,49716477,49720653,49720894,49721105,49721529	Gene ID= ENSG00000164068.15 TPM= 14.01 Transcript Type= NA
chr3	49716834	49719695	49716834	49719695	-	ENST00000320431.7@AMIGO3	ENST00000320431.7	protein_coding	49716834	49719695	Gene ID= ENSG00000176020.8 TPM= 8.17 Transcript Type= protein_coding
chr3	49721476	49723993	49721476	49723993	-	transcript2784.chr3.nic@GMPPB	transcript2784.chr3.nic	protein_coding	49723598,49723392,49723254,49722972,49722596,49721965,49721476	49723993,49723472,49723302,49723114,49722754,49722510,49721883	Gene ID= ENSG00000173540.12 TPM= 3.5 Transcript Type= NA
chr3	49721505	49723993	49721505	49723993	-	transcript2789.chr3.nic@GMPPB	transcript2789.chr3.nic	protein_coding	49723598,49723392,49723254,49722596,49721505	49723993,49723472,49723302,49723114,49722510	Gene ID= ENSG00000173540.12 TPM= 3.5 Transcript Type= NA
chr3	49719924	49723951	49719924	49723951	-	ENST00000308375.10@GMPPB	ENST00000308375.10	protein_coding	49723598,49723392,49723254,49722972,49722596,49722432,49722231,49719924	49723951,49723472,49723302,49723114,49722754,49722510,49722358,49722147	Gene ID= ENSG00000173540.12 TPM= 10.51 Transcript Type= protein_coding
chr3	49721476	49723949	49721476	49723949	-	ENST00000308388.6@GMPPB	ENST00000308388.6	protein_coding	49723598,49723392,49723254,49722972,49722596,49722432,49722231,49721965,49721476	49723949,49723472,49723302,49723114,49722754,49722510,49722358,49722147,49721883	Gene ID= ENSG00000173540.12 TPM= 47.87 Transcript Type= protein_coding
chr3	49724294	49786527	49724294	49786527	-	ENST00000321599.8@IP6K1	ENST00000321599.8	protein_coding	49786354,49747818,49738212,49732791,49728103,49724294	49786527,49748168,49738422,49732972,49728278,49727655	Gene ID= ENSG00000176095.11 TPM= 51.96 Transcript Type= protein_coding
chr3	49724295	49786540	49724295	49786540	-	ENST00000395238.5@IP6K1	ENST00000395238.5	protein_coding	49786354,49738212,49732791,49728103,49724295	49786540,49738422,49732972,49728278,49727655	Gene ID= ENSG00000176095.11 TPM= 21.6 Transcript Type= protein_coding
chr3	49803211	49805030	49803211	49805030	+	transcript2831.chr3.nnic@FAM212A	transcript2831.chr3.nnic	protein_coding	49803211,49804181	49803367,49805030	Gene ID= ENSG00000185614.4 TPM= 2.34 Transcript Type= NA
chr3	49803254	49805030	49803254	49805030	+	ENST00000333323.4@FAM212A	ENST00000333323.4	protein_coding	49803254,49804181	49803443,49805030	Gene ID= ENSG00000185614.4 TPM= 11.68 Transcript Type= protein_coding
chr3	49803212	49805026	49803212	49805026	+	transcript2834.chr3.nnic@NA	transcript2834.chr3.nnic	NA	49803212	49805026	Gene ID= novel_gene_chr3_2835 TPM= 2.34 Transcript Type= NA
chr3	49805207	49813962	49805207	49813962	-	transcript2802.chr3.nic@UBA7	transcript2802.chr3.nic	protein_coding	49813732,49813479,49813249,49813062,49812648,49812408,49812109,49811273,49810984,49810752,49810517,49810263,49809978,49809815,49809542,49809390,49808976,49808386,49808020,49807736,49806073,49805897,49805207	49813962,49813647,49813383,49813168,49812738,49812543,49812206,49812016,49811091,49810832,49810672,49810428,49810183,49809879,49809725,49809464,49809159,49808468,49808112,49807927,49806165,49805997,49805437	Gene ID= ENSG00000182179.12 TPM= 4.67 Transcript Type= NA
chr3	49805207	49813962	49805207	49813962	-	transcript2808.chr3.nnic@UBA7	transcript2808.chr3.nnic	protein_coding	49813732,49813479,49813249,49813062,49812648,49812408,49812109,49811870,49811273,49810984,49810752,49810517,49810263,49809978,49809815,49809542,49808976,49808386,49808020,49807736,49806073,49805897,49805207	49813962,49813647,49813383,49813168,49812738,49812543,49812206,49812016,49811455,49811091,49810832,49810672,49810428,49810183,49809879,49809725,49809159,49808468,49808112,49807927,49806165,49805997,49805437	Gene ID= ENSG00000182179.12 TPM= 8.17 Transcript Type= NA
chr3	49805207	49813962	49805207	49813962	-	transcript2809.chr3.nic@UBA7	transcript2809.chr3.nic	protein_coding	49813732,49813479,49813249,49813062,49812648,49812408,49812109,49810984,49810752,49810517,49810263,49809978,49809815,49809542,49809390,49808976,49808386,49808020,49807736,49806073,49805897,49805207	49813962,49813647,49813383,49813168,49812738,49812543,49812206,49812016,49810832,49810672,49810428,49810183,49809879,49809725,49809464,49809159,49808468,49808112,49807927,49806165,49805997,49805437	Gene ID= ENSG00000182179.12 TPM= 4.67 Transcript Type= NA
chr3	49805207	49813905	49805207	49813905	-	transcript2812.chr3.nnic@UBA7	transcript2812.chr3.nnic	protein_coding	49813732,49813479,49813249,49813062,49812648,49812408,49812109,49811870,49810984,49810752,49810517,49810263,49809978,49809815,49809542,49808976,49808386,49808020,49807736,49806073,49805897,49805207	49813905,49813647,49813383,49813168,49812738,49812543,49812206,49812016,49811455,49810832,49810672,49810428,49810183,49809879,49809725,49809159,49808468,49808112,49807927,49806165,49805997,49805437	Gene ID= ENSG00000182179.12 TPM= 4.67 Transcript Type= NA
chr3	49805207	49813962	49805207	49813962	-	transcript2820.chr3.nic@UBA7	transcript2820.chr3.nic	protein_coding	49813732,49813479,49813249,49813062,49812648,49812408,49812109,49810984,49810752,49809978,49809815,49809542,49809390,49808976,49808386,49808020,49807736,49806073,49805897,49805207	49813962,49813647,49813383,49813168,49812738,49812543,49812206,49812016,49810832,49810672,49809879,49809725,49809464,49809159,49808468,49808112,49807927,49806165,49805997,49805437	Gene ID= ENSG00000182179.12 TPM= 4.67 Transcript Type= NA
chr3	49805207	49813962	49805207	49813962	-	transcript2822.chr3.nic@UBA7	transcript2822.chr3.nic	protein_coding	49813732,49813479,49813249,49813062,49812648,49812408,49812109,49810984,49810752,49810517,49810263,49809978,49809815,49808976,49808386,49808020,49807736,49806073,49805897,49805207	49813962,49813647,49813383,49813168,49812738,49812543,49812206,49812016,49810832,49810672,49810428,49810183,49809879,49809725,49808468,49808112,49807927,49806165,49805997,49805437	Gene ID= ENSG00000182179.12 TPM= 4.67 Transcript Type= NA
chr3	49805207	49813946	49805207	49813946	-	ENST00000333486.3@UBA7	ENST00000333486.3	protein_coding	49813732,49813479,49813249,49813062,49812648,49812408,49812109,49811870,49811273,49810984,49810752,49810517,49810263,49809978,49809815,49809542,49809390,49808976,49808386,49808020,49807736,49806073,49805897,49805207	49813946,49813647,49813383,49813168,49812738,49812543,49812206,49812016,49811455,49811091,49810832,49810672,49810428,49810183,49809879,49809725,49809464,49809159,49808468,49808112,49807927,49806165,49805997,49805437	Gene ID= ENSG00000182179.12 TPM= 67.72 Transcript Type= protein_coding
chr3	49887007	49903873	49887007	49903873	-	ENST00000621387.4@MST1R	ENST00000621387.4	protein_coding	49902380,49898518,49898051,49897520,49897280,49896729,49896540,49896195,49895961,49895715,49895447,49895167,49891758,49891399,49891197,49890485,49889924,49887007	49903873,49898688,49898211,49897685,49897416,49896890,49896633,49896404,49896107,49895880,49895548,49895373,49891838,49891580,49891306,49890650,49890060,49887562	Gene ID= ENSG00000164078.12 TPM= 15.18 Transcript Type= protein_coding
chr3	49908873	49929516	49908873	49929516	-	transcript2858.chr3.nic@MON1A	transcript2858.chr3.nic	protein_coding	49929369,49913220,49911526,49910119,49909253,49908873	49929516,49913359,49912011,49910884,49909400,49909154	Gene ID= ENSG00000164077.13 TPM= 3.12 Transcript Type= NA
chr3	49908862	49930145	49908862	49930145	-	ENST00000296473.7@MON1A	ENST00000296473.7	protein_coding	49929609,49913220,49911526,49910119,49909253,49908862	49930145,49913359,49912011,49910884,49909400,49909154	Gene ID= ENSG00000164077.13 TPM= 28.8 Transcript Type= protein_coding
chr3	49908873	49929889	49908873	49929889	-	ENST00000455683.6@MON1A	ENST00000455683.6	protein_coding	49929609,49913220,49910119,49909253,49908873	49929889,49913359,49910884,49909400,49909154	Gene ID= ENSG00000164077.13 TPM= 4.29 Transcript Type= protein_coding
chr3	49908870	49929877	49908870	49929877	-	transcript2863.chr3.nic@MON1A	transcript2863.chr3.nic	protein_coding	49929609,49913220,49911526,49908870	49929877,49913359,49912011,49910884	Gene ID= ENSG00000164077.13 TPM= 4.67 Transcript Type= NA
chr3	49940033	50077252	49940033	50077252	+	ENST00000266022.8@RBM6	ENST00000266022.8	protein_coding	49940033,49962576,49967470,49972059,49975323,49999440,50048245,50054335,50057728,50058402,50059649,50060956,50061140,50061462,50061962,50065031,50066242,50068690,50070455,50075201,50077008	49940225,49962685,49968748,49972148,49975392,49999513,50048319,50054395,50058003,50058562,50059746,50060998,50061221,50061547,50062108,50065126,50066502,50068764,50070552,50075330,50077252	Gene ID= ENSG00000004534.14 TPM= 45.77 Transcript Type= protein_coding
chr3	49940033	50077249	49940033	50077249	+	transcript2847.chr3.nic@RBM6	transcript2847.chr3.nic	protein_coding	49940033,49962576,49967198,49972059,49975323,50048245,50054335,50057728,50058402,50059649,50060956,50061140,50061462,50061962,50065031,50066242,50068690,50070455,50075201,50077008	49940225,49962685,49968748,49972148,49975392,50048319,50054395,50058003,50058562,50059746,50060998,50061221,50061547,50062108,50065126,50066502,50068764,50070552,50075330,50077249	Gene ID= ENSG00000004534.14 TPM= 4.32 Transcript Type= NA
chr3	49940086	50077249	49940086	50077249	+	transcript2848.chr3.nic@RBM6	transcript2848.chr3.nic	protein_coding	49940086,49962576,49967470,49972059,49975323,50048245,50054335,50057728,50058402,50059649,50060956,50061140,50061462,50061962,50065031,50066242,50068690,50070455,50075201,50077008	49940225,49962685,49968748,49972148,49975392,50048319,50054395,50058003,50058562,50059746,50060998,50061221,50061547,50062108,50065126,50066502,50068764,50070552,50075330,50077249	Gene ID= ENSG00000004534.14 TPM= 11.91 Transcript Type= NA
chr3	49940033	50077249	49940033	50077249	+	transcript2849.chr3.nic@RBM6	transcript2849.chr3.nic	protein_coding	49940033,49962576,49972059,49975323,49999440,50048245,50054335,50057728,50058402,50059649,50060956,50061140,50061462,50061962,50065031,50066242,50068690,50070455,50075201,50077008	49940225,49962685,49972148,49975392,49999513,50048319,50054395,50058003,50058562,50059746,50060998,50061221,50061547,50062108,50065126,50066502,50068764,50070552,50075330,50077249	Gene ID= ENSG00000004534.14 TPM= 5.49 Transcript Type= NA
chr3	49940007	50077249	49940007	50077249	+	ENST00000442092.5@RBM6	ENST00000442092.5	protein_coding	49940007,49962576,50048245,50054335,50057728,50058402,50059649,50060956,50061140,50061462,50061962,50065031,50066242,50068690,50070455,50075201,50077008	49940225,49962685,50048319,50054395,50058003,50058562,50059746,50060998,50061221,50061547,50062108,50065126,50066502,50068764,50070552,50075330,50077249	Gene ID= ENSG00000004534.14 TPM= 8.41 Transcript Type= protein_coding
chr3	50088908	50119021	50088908	50119021	+	ENST00000347869.7@RBM5	ENST00000347869.7	protein_coding	50088908,50090382,50092043,50093720,50099982,50100532,50103083,50104248,50105077,50105549,50106767,50107482,50108070,50108232,50109603,50110379,50110679,50113383,50113950,50114180,50115428,50115906,50117074,50117250,50118331	50089029,50090451,50092208,50093875,50100051,50100605,50103166,50104308,50105142,50105709,50106864,50107569,50108147,50108304,50109688,50110463,50110770,50113544,50114099,50114251,50115607,50115980,50117171,50117379,50119021	Gene ID= ENSG00000003756.16 TPM= 4.67 Transcript Type= protein_coding
chr3	50088901	50118957	50088901	50118957	+	transcript2874.chr3.nic@RBM5	transcript2874.chr3.nic	protein_coding	50088901,50090382,50092043,50093720,50099982,50103083,50104248,50105077,50105549,50106767,50107482,50108070,50108232,50109603,50110379,50110679,50113383,50113950,50114180,50115428,50115906,50117074,50117250,50118331	50089029,50090451,50092208,50093875,50100051,50103166,50104308,50105142,50105709,50106864,50107569,50108147,50108304,50109688,50110463,50110770,50113544,50114099,50114251,50115607,50115980,50117171,50117379,50118957	Gene ID= ENSG00000003756.16 TPM= 10.71 Transcript Type= NA
chr3	50088901	50118957	50088901	50118957	+	transcript2875.chr3.nnic@RBM5	transcript2875.chr3.nnic	protein_coding	50088901,50090382,50093720,50099982,50100532,50103083,50104248,50105077,50105549,50106767,50107482,50108070,50108232,50109603,50110379,50110679,50113383,50113950,50114180,50115428,50115906,50117074,50117250,50118331	50089029,50090451,50093875,50100051,50100605,50103166,50104308,50105142,50105709,50106864,50107569,50108147,50108304,50109688,50110463,50110770,50113544,50114099,50114251,50115607,50115980,50117171,50117379,50118957	Gene ID= ENSG00000003756.16 TPM= 2.53 Transcript Type= NA
chr3	50088901	50118957	50088901	50118957	+	transcript2878.chr3.nic@RBM5	transcript2878.chr3.nic	protein_coding	50088901,50090382,50092043,50093720,50099982,50103083,50105077,50105549,50106767,50107482,50108070,50108232,50109603,50110379,50110679,50113383,50113950,50114180,50115428,50115906,50117074,50117250,50118331	50089029,50090451,50092208,50093875,50100051,50103166,50105142,50105709,50106864,50107569,50108147,50108304,50109688,50110463,50110770,50113544,50114099,50114251,50115607,50115980,50117171,50117379,50118957	Gene ID= ENSG00000003756.16 TPM= 3.7 Transcript Type= NA
chr3	50088963	50118957	50088963	50118957	+	ENST00000464087.6@RBM5	ENST00000464087.6	protein_coding	50088963,50090382,50092043,50093720,50099982,50100532,50104248,50105077,50105549,50106767,50107018,50107482,50108070,50108232,50109603,50110379,50110679,50113383,50113950,50114180,50115428,50115906,50117074,50117250,50118331	50089029,50090451,50092208,50093875,50100051,50103166,50104308,50105142,50105709,50106864,50107087,50107569,50108147,50108304,50109688,50110463,50110770,50113544,50114099,50114251,50115607,50115980,50117171,50117379,50118957	Gene ID= ENSG00000003756.16 TPM= 1.37 Transcript Type= retained_intron
chr3	50102549	50118957	50102549	50118957	+	transcript2880.chr3.nic@RBM5	transcript2880.chr3.nic	protein_coding	50102549,50104248,50105077,50105549,50106767,50107482,50108070,50108232,50109603,50110379,50110679,50113383,50113950,50114180,50115428,50115906,50117074,50117250,50118331	50103166,50104308,50105142,50105709,50106864,50107569,50108147,50108304,50109688,50110463,50110770,50113544,50114099,50114251,50115607,50115980,50117171,50117379,50118957	Gene ID= ENSG00000003756.16 TPM= 4.87 Transcript Type= NA
chr3	50112139	50118957	50112139	50118957	+	transcript2881.chr3.nic@RBM5	transcript2881.chr3.nic	protein_coding	50112139,50113950,50114180,50115428,50115906,50117074,50117250,50118331	50113544,50114099,50114251,50115607,50115980,50117171,50117379,50118957	Gene ID= ENSG00000003756.16 TPM= 6.04 Transcript Type= NA
chr3	50088901	50092577	50088901	50092577	+	transcript2883.chr3.nic@RBM5	transcript2883.chr3.nic	protein_coding	50088901,50090382	50089029,50092577	Gene ID= ENSG00000003756.16 TPM= 2.34 Transcript Type= NA
chr3	50155026	50189075	50155026	50189075	+	transcript2890.chr3.nic@SEMA3F	transcript2890.chr3.nic	protein_coding	50155026,50159575,50173793,50174052,50174231,50176768,50182284,50182644,50182904,50183186,50183420,50184592,50185443,50185666,50185889,50186281,50186613,50187705	50155564,50159734,50173953,50174114,50174350,50176861,50182403,50182783,50183018,50183255,50183564,50184814,50185531,50185707,50186046,50186348,50186746,50189075	Gene ID= ENSG00000001617.11 TPM= 46.32 Transcript Type= NA
chr3	50175903	50189075	50175903	50189075	+	transcript2899.chr3.nic@SEMA3F	transcript2899.chr3.nic	protein_coding	50175903,50182284,50182644,50182904,50183186,50183420,50184592,50185443,50185666,50185889,50186281,50186613,50187705	50176861,50182403,50182783,50183018,50183255,50183564,50184814,50185531,50185707,50186046,50186348,50186746,50189075	Gene ID= ENSG00000001617.11 TPM= 10.12 Transcript Type= NA
chr3	50155129	50189075	50155129	50189075	+	ENST00000002829.7@SEMA3F	ENST00000002829.7	protein_coding	50155129,50159575,50173793,50174052,50174231,50175096,50176768,50182284,50182644,50182904,50183186,50183420,50184592,50185443,50185666,50185889,50186281,50186613,50187705	50155564,50159734,50173953,50174114,50174350,50175188,50176861,50182403,50182783,50183018,50183255,50183564,50184814,50185531,50185707,50186046,50186348,50186746,50189075	Gene ID= ENSG00000001617.11 TPM= 20.63 Transcript Type= protein_coding
chr3	50226292	50258898	50226292	50258898	+	ENST00000422163.5@GNAI2	ENST00000422163.5	protein_coding	50226292,50252100,50252397,50253024,50256192,50256723,50256937,50257500,50258368	50227193,50252142,50252538,50253184,50256320,50256852,50257090,50257714,50258898	Gene ID= ENSG00000114353.16 TPM= 4.67 Transcript Type= protein_coding
chr3	50235952	50259355	50235952	50259355	+	ENST00000313601.10@GNAI2	ENST00000313601.10	protein_coding	50235952,50252100,50252397,50253024,50256192,50256723,50256937,50257500,50258368	50236453,50252142,50252538,50253184,50256320,50256852,50257090,50257714,50259355	Gene ID= ENSG00000114353.16 TPM= 524.05 Transcript Type= protein_coding
chr3	50236152	50259353	50236152	50259353	+	transcript2913.chr3.nic@GNAI2	transcript2913.chr3.nic	protein_coding	50236152,50252100,50252397,50253024,50256192,50256723,50256937,50257500	50236453,50252142,50252538,50253184,50256320,50256852,50257090,50259353	Gene ID= ENSG00000114353.16 TPM= 38.33 Transcript Type= NA
chr3	50236202	50240934	50236202	50240934	+	transcript2921.chr3.nnic@NA	transcript2921.chr3.nnic	NA	50236202	50240934	Gene ID= novel_gene_chr3_2922 TPM= 8.17 Transcript Type= NA
chr3	50267510	50277165	50267510	50277165	+	transcript2928.chr3.nic@SEMA3B	transcript2928.chr3.nic	protein_coding	50267510,50269161,50270127,50270433,50270890,50271088,50271361,50273298,50273535,50273759,50273916,50274363,50274843,50275012,50275302,50275560,50275705,50276302	50267769,50269349,50270284,50270495,50271009,50271181,50271480,50273443,50273646,50273828,50274057,50274582,50274934,50275053,50275459,50275615,50275844,50277165	Gene ID= ENSG00000012171.19 TPM= 133.55 Transcript Type= NA
chr3	50267620	50277165	50267620	50277165	+	transcript2934.chr3.nic@SEMA3B	transcript2934.chr3.nic	protein_coding	50267620,50269161,50270127,50270433,50270890,50271088,50271361,50273298,50273535,50273913,50274363,50274843,50275012,50275302,50275560,50275705,50276302	50267769,50269349,50270284,50270495,50271009,50271181,50271480,50273443,50273828,50274057,50274582,50274934,50275053,50275459,50275615,50275844,50277165	Gene ID= ENSG00000012171.19 TPM= 23.4 Transcript Type= NA
chr3	50267608	50277139	50267608	50277139	+	ENST00000618865.4@SEMA3B	ENST00000618865.4	protein_coding	50267608,50269161,50270127,50270433,50270890,50271088,50271361,50273298,50273535,50273759,50273913,50274363,50274843,50275012,50275302,50275560,50275705,50276302	50267769,50269349,50270284,50270495,50271009,50271181,50271480,50273443,50273646,50273828,50274057,50274582,50274934,50275053,50275459,50275615,50275844,50277139	Gene ID= ENSG00000012171.19 TPM= 251.29 Transcript Type= protein_coding
chr3	50269006	50277179	50269006	50277179	+	ENST00000616701.4@SEMA3B	ENST00000616701.4	protein_coding	50269006,50270127,50270433,50270890,50271088,50271361,50273298,50273535,50273759,50273913,50274363,50274843,50275012,50275302,50275560,50275705,50276302	50269349,50270284,50270495,50271009,50271181,50271480,50273443,50273646,50273828,50274057,50274582,50274934,50275053,50275459,50275615,50275844,50277179	Gene ID= ENSG00000012171.19 TPM= 103.12 Transcript Type= protein_coding
chr3	50269169	50277142	50269169	50277142	+	ENST00000433753.4@SEMA3B	ENST00000433753.4	protein_coding	50269169,50270127,50270433,50270890,50271088,50271361,50273298,50273535,50273759,50273916,50274363,50274843,50275012,50275302,50275560,50275705,50276302	50269349,50270284,50270495,50271009,50271181,50271480,50273443,50273646,50273828,50274057,50274582,50274934,50275053,50275459,50275615,50275844,50277142	Gene ID= ENSG00000012171.19 TPM= 28.86 Transcript Type= protein_coding
chr3	50273119	50277165	50273119	50277165	+	ENST00000456560.6@SEMA3B	ENST00000456560.6	protein_coding	50273119,50273535,50273759,50273916,50274363,50274843,50275012,50275302,50275560,50275705,50276302	50273443,50273646,50273828,50274057,50274582,50274934,50275053,50275459,50275615,50275844,50277165	Gene ID= ENSG00000012171.19 TPM= 9.66 Transcript Type= protein_coding
chr3	50287732	50292595	50287732	50292595	-	ENST00000417626.6@IFRD2	ENST00000417626.6	protein_coding	50292217,50290560,50290388,50290170,50289929,50289712,50289447,50289255,50288800,50288583,50288409,50287732	50292595,50290679,50290472,50290294,50290086,50289762,50289628,50289360,50288937,50288711,50288504,50288271	Gene ID= ENSG00000214706.10 TPM= 240.91 Transcript Type= protein_coding
chr3	50287743	50292435	50287743	50292435	-	transcript2974.chr3.nic@IFRD2	transcript2974.chr3.nic	protein_coding	50292217,50290560,50290388,50290170,50289929,50289712,50289447,50289255,50288800,50288583,50287743	50292435,50290679,50290472,50290294,50290086,50289762,50289628,50289360,50288937,50288711,50288504	Gene ID= ENSG00000214706.10 TPM= 18.88 Transcript Type= NA
chr3	50296401	50299364	50296401	50299364	-	transcript3053.chr3.nnic@NA	transcript3053.chr3.nnic	NA	50296401	50299364	Gene ID= novel_gene_chr3_3054 TPM= 5.84 Transcript Type= NA
chr3	50296402	50299416	50296402	50299416	-	ENST00000354862.4@NAT6	ENST00000354862.4	protein_coding	50299213,50296402	50299416,50297527	Gene ID= ENSG00000243477.5 TPM= 4.67 Transcript Type= protein_coding
chr3	50296418	50299421	50296418	50299421	-	ENST00000443094.2@NAT6	ENST00000443094.2	protein_coding	50299213,50296418	50299421,50297672	Gene ID= ENSG00000243477.5 TPM= 2.34 Transcript Type= protein_coding
chr3	50299889	50303620	50299889	50303620	-	ENST00000395144.6@HYAL1	ENST00000395144.6	protein_coding	50303466,50302057,50300988,50299889	50303620,50302980,50301077,50300800	Gene ID= ENSG00000114378.16 TPM= 40.63 Transcript Type= protein_coding
chr3	50299890	50303572	50299890	50303572	-	ENST00000266031.8@HYAL1	ENST00000266031.8	protein_coding	50302057,50300988,50299890	50303572,50301077,50300800	Gene ID= ENSG00000114378.16 TPM= 29.25 Transcript Type= protein_coding
chr3	50299894	50312381	50299894	50312381	-	ENST00000320295.12@HYAL1	ENST00000320295.12	protein_coding	50312264,50309659,50303788,50302057,50300988,50299894	50312381,50309777,50303953,50302980,50301077,50300800	Gene ID= ENSG00000114378.16 TPM= 15.62 Transcript Type= protein_coding
chr3	50317812	50322822	50317812	50322822	-	transcript3024.chr3.nic@HYAL2	transcript3024.chr3.nic	protein_coding	50322653,50321568,50319569,50318956,50317812	50322822,50321773,50320535,50319045,50318539	Gene ID= ENSG00000068001.13 TPM= 54.12 Transcript Type= NA
chr3	50317812	50322777	50317812	50322777	-	ENST00000442581.1@HYAL2	ENST00000442581.1	protein_coding	50322653,50321366,50319569,50318956,50317812	50322777,50321773,50320535,50319045,50318539	Gene ID= ENSG00000068001.13 TPM= 246.77 Transcript Type= protein_coding
chr3	50317796	50322906	50317796	50322906	-	ENST00000357750.8@HYAL2	ENST00000357750.8	protein_coding	50322653,50319569,50318956,50317796	50322906,50320535,50319045,50318539	Gene ID= ENSG00000068001.13 TPM= 1169.85 Transcript Type= protein_coding
chr3	50317790	50322782	50317790	50322782	-	ENST00000447092.5@HYAL2	ENST00000447092.5	protein_coding	50319569,50318956,50317790	50322782,50319045,50318539	Gene ID= ENSG00000068001.13 TPM= 66.55 Transcript Type= protein_coding
chr3	50324907	50328243	50324907	50328243	-	ENST00000232496.4@TUSC2	ENST00000232496.4	protein_coding	50327954,50326357,50324907	50328243,50326477,50326186	Gene ID= ENSG00000114383.9 TPM= 44.37 Transcript Type= protein_coding
chr3	50329788	50340840	50329788	50340840	-	transcript3086.chr3.nic@RASSF1	transcript3086.chr3.nic	protein_coding	50340556,50337173,50332050,50331559,50331334,50329788	50340840,50338011,50332154,50331856,50331449,50330727	Gene ID= ENSG00000068028.17 TPM= 4.67 Transcript Type= NA
chr3	50329788	50340841	50329788	50340841	-	ENST00000357043.6@RASSF1	ENST00000357043.6	protein_coding	50340556,50337905,50332050,50331559,50331334,50329788	50340841,50338023,50332154,50331856,50331449,50330727	Gene ID= ENSG00000068028.17 TPM= 3.5 Transcript Type= protein_coding
chr3	50329788	50340912	50329788	50340912	-	ENST00000359365.8@RASSF1	ENST00000359365.8	protein_coding	50340556,50337905,50332050,50331559,50331334,50329788	50340912,50338011,50332154,50331856,50331449,50330727	Gene ID= ENSG00000068028.17 TPM= 36.2 Transcript Type= protein_coding
chr3	50329782	50337464	50329782	50337464	-	ENST00000327761.7@RASSF1	ENST00000327761.7	protein_coding	50337173,50332050,50331559,50331334,50329782	50337464,50332154,50331856,50331449,50330727	Gene ID= ENSG00000068028.17 TPM= 68.89 Transcript Type= protein_coding
chr3	50329788	50338233	50329788	50338233	-	ENST00000395126.7@RASSF1	ENST00000395126.7	protein_coding	50338143,50337905,50332050,50331559,50331334,50329788	50338233,50338011,50332154,50331856,50331449,50330727	Gene ID= ENSG00000068028.17 TPM= 4.67 Transcript Type= protein_coding
chr3	50347488	50351091	50347488	50351091	-	ENST00000232501.7@NPRL2	ENST00000232501.7	protein_coding	50350575,50349931,50349665,50349386,50348874,50348685,50348527,50348317,50348124,50347759,50347488	50351091,50350022,50349833,50349494,50349010,50348782,50348563,50348410,50348241,50347901,50347673	Gene ID= ENSG00000114388.12 TPM= 30.94 Transcript Type= protein_coding
chr3	50347488	50350777	50347488	50350777	-	transcript3073.chr3.nic@NPRL2	transcript3073.chr3.nic	protein_coding	50349931,50349665,50349386,50348874,50348685,50348527,50348317,50348124,50347759,50347488	50350777,50349833,50349494,50349010,50348782,50348563,50348410,50348241,50347901,50347673	Gene ID= ENSG00000114388.12 TPM= 2.92 Transcript Type= NA
chr3	50347488	50350762	50347488	50350762	-	transcript3074.chr3.nic@NPRL2	transcript3074.chr3.nic	protein_coding	50350575,50349931,50349386,50348874,50348685,50348527,50348317,50348124,50347759,50347488	50350762,50350022,50349833,50349010,50348782,50348563,50348410,50348241,50347901,50347673	Gene ID= ENSG00000114388.12 TPM= 2.34 Transcript Type= NA
chr3	50347488	50350783	50347488	50350783	-	transcript3077.chr3.nic@NPRL2	transcript3077.chr3.nic	protein_coding	50349931,50348874,50348685,50348527,50348317,50348124,50347759,50347488	50350783,50349833,50348782,50348563,50348410,50348241,50347901,50347673	Gene ID= ENSG00000114388.12 TPM= 2.34 Transcript Type= NA
chr3	50347499	50350766	50347499	50350766	-	ENST00000479512.5@NPRL2	ENST00000479512.5	protein_coding	50349933,50349665,50349386,50348874,50348685,50348527,50348317,50348124,50347759,50347499	50350766,50349828,50349490,50349010,50348782,50348563,50348410,50348241,50347901,50347673	Gene ID= ENSG00000114388.12 TPM= 1.17 Transcript Type= retained_intron
chr3	50350695	50354079	50350695	50354079	+	ENST00000425346.5@CYB561D2	ENST00000425346.5	protein_coding	50350695,50351409,50352009,50353241	50350984,50351560,50352046,50354079	Gene ID= ENSG00000114395.10 TPM= 32.69 Transcript Type= protein_coding
chr3	50350845	50354069	50350845	50354069	+	ENST00000232508.9@CYB561D2	ENST00000232508.9	protein_coding	50350845,50351343,50352009,50353241	50350984,50351560,50352046,50354069	Gene ID= ENSG00000114395.10 TPM= 14.01 Transcript Type= protein_coding
chr3	50350858	50354032	50350858	50354032	+	ENST00000418577.1@CYB561D2	ENST00000418577.1	protein_coding	50350858,50352009,50353241	50351560,50352046,50354032	Gene ID= ENSG00000114395.10 TPM= 8.17 Transcript Type= protein_coding
chr3	50354749	50359610	50354749	50359610	-	ENST00000266025.3@TMEM115	ENST00000266025.3	protein_coding	50358213,50354749	50359610,50355547	Gene ID= ENSG00000126062.3 TPM= 152.95 Transcript Type= protein_coding
chr3	50383078	50503679	50383078	50503679	-	transcript3093.chr3.nnic@CACNA2D2	transcript3093.chr3.nnic	protein_coding	50503218,50476118,50434313,50394109,50387568,50383078	50503679,50476201,50434429,50394168,50387615,50384340	Gene ID= ENSG00000007402.11 TPM= 7.01 Transcript Type= NA
chr3	50362855	50365782	50362855	50365782	-	ENST00000483620.1@CACNA2D2	ENST00000483620.1	protein_coding	50365633,50365356,50364888,50362855	50365782,50365482,50365184,50364806	Gene ID= ENSG00000007402.11 TPM= 30.36 Transcript Type= retained_intron
chr3	50425896	50429618	50425896	50429618	+	transcript3116.chr3.nnic@NA	transcript3116.chr3.nnic	NA	50425896	50429618	Gene ID= novel_gene_chr3_3117 TPM= 43.2 Transcript Type= NA
chr3	50467017	50468927	50467017	50468927	+	transcript3118.chr3.nnic@NA	transcript3118.chr3.nnic	NA	50467017	50468927	Gene ID= novel_gene_chr3_3119 TPM= 2.34 Transcript Type= NA
chr3	50558031	50569539	50558031	50569539	-	transcript3138.chr3.nnic@C3orf18	transcript3138.chr3.nnic	protein_coding	50569402,50561722,50560917,50558031	50569539,50561747,50561064,50559737	Gene ID= ENSG00000088543.14 TPM= 2.34 Transcript Type= NA
chr3	50558031	50567751	50558031	50567751	-	ENST00000357203.7@C3orf18	ENST00000357203.7	protein_coding	50567463,50566006,50565466,50561722,50560917,50558031	50567751,50566094,50565861,50561747,50561064,50559737	Gene ID= ENSG00000088543.14 TPM= 4.67 Transcript Type= protein_coding
chr3	50558025	50567665	50558025	50567665	-	ENST00000426034.5@C3orf18	ENST00000426034.5	protein_coding	50567463,50565466,50561722,50560917,50558025	50567665,50565861,50561747,50561064,50559737	Gene ID= ENSG00000088543.14 TPM= 5.84 Transcript Type= protein_coding
chr3	50569475	50580672	50569475	50580672	+	transcript3121.chr3.nnic@HEMK1	transcript3121.chr3.nnic	protein_coding	50569475,50570931,50571710,50572077,50577052,50577509,50577826,50578821,50579844,50580116,50580381	50569574,50571332,50571801,50572208,50577186,50577573,50577875,50578926,50579939,50580229,50580672	Gene ID= ENSG00000114735.9 TPM= 2.34 Transcript Type= NA
chr3	50569197	50584935	50569197	50584935	+	ENST00000232854.8@HEMK1	ENST00000232854.8	protein_coding	50569197,50570931,50571710,50572115,50577052,50577509,50577826,50578821,50579844,50580116,50580381	50569574,50571332,50571801,50572208,50577186,50577573,50577875,50578926,50579939,50580229,50584935	Gene ID= ENSG00000114735.9 TPM= 9.34 Transcript Type= protein_coding
chr3	50569493	50580672	50569493	50580672	+	ENST00000455834.5@HEMK1	ENST00000455834.5	protein_coding	50569493,50570931,50571710,50572115,50577052,50577509,50577826,50578821,50579844,50580116,50580381	50569545,50571332,50571801,50572208,50577186,50577573,50577875,50578926,50579939,50580229,50580672	Gene ID= ENSG00000114735.9 TPM= 9.34 Transcript Type= protein_coding
chr3	50583896	50589048	50583896	50589048	+	transcript3139.chr3.nnic@NA	transcript3139.chr3.nnic	NA	50583896	50589048	Gene ID= novel_gene_chr3_3140 TPM= 2.34 Transcript Type= NA
chr3	50606488	50609885	50606488	50609885	-	transcript3169.chr3.nnic@NA	transcript3169.chr3.nnic	NA	50606488	50609885	Gene ID= novel_gene_chr3_3170 TPM= 16.93 Transcript Type= NA
chr3	50606490	50611761	50606490	50611761	-	ENST00000491847.1@CISH	ENST00000491847.1	protein_coding	50608373,50606490	50611761,50608142	Gene ID= ENSG00000114737.15 TPM= 18.1 Transcript Type= retained_intron
chr3	50606522	50611831	50606522	50611831	-	ENST00000348721.3@CISH	ENST00000348721.3	protein_coding	50611631,50608373,50606522	50611831,50608593,50608142	Gene ID= ENSG00000114737.15 TPM= 22.18 Transcript Type= protein_coding
chr3	50617164	50649289	50617164	50649289	+	transcript3151.chr3.nic@MAPKAPK3	transcript3151.chr3.nic	protein_coding	50617164,50640366,50641707,50642253,50644409,50645710,50646140,50646740,50647123,50647894	50617784,50640505,50641771,50642332,50644532,50645785,50646264,50646825,50647203,50649289	Gene ID= ENSG00000114738.10 TPM= 21.22 Transcript Type= NA
chr3	50617131	50649297	50617131	50649297	+	ENST00000621469.4@MAPKAPK3	ENST00000621469.4	protein_coding	50617131,50617514,50640366,50641707,50642253,50644409,50645710,50646140,50646740,50647123,50647894	50617241,50617784,50640505,50641771,50642332,50644532,50645785,50646264,50646825,50647203,50649297	Gene ID= ENSG00000114738.10 TPM= 43.98 Transcript Type= protein_coding
chr3	50617170	50649288	50617170	50649288	+	ENST00000357955.6@MAPKAPK3	ENST00000357955.6	protein_coding	50617170,50617514,50640366,50641707,50642253,50644409,50645710,50646140,50646740,50647123,50647894	50617226,50617784,50640505,50641771,50642332,50644532,50645785,50646264,50646825,50647203,50649288	Gene ID= ENSG00000114738.10 TPM= 34.06 Transcript Type= protein_coding
chr3	50651280	50655131	50651280	50655131	-	transcript3167.chr3.nnic@NA	transcript3167.chr3.nnic	NA	50651280	50655131	Gene ID= novel_gene_chr3_3168 TPM= 17.51 Transcript Type= NA
chr3	50674962	50937297	50674962	50937297	+	transcript3177.chr3.nic@DOCK3	transcript3177.chr3.nic	protein_coding	50674962,50778675,50841675,50890026,50933981	50675300,50778758,50841715,50890081,50937297	Gene ID= ENSG00000088538.12 TPM= 2.34 Transcript Type= NA
chr3	51385047	51389397	51385047	51389397	+	ENST00000528157.5@MANF	ENST00000528157.5	protein_coding	51385047,51386208,51387737,51388905	51385436,51386335,51387878,51389397	Gene ID= ENSG00000145050.15 TPM= 28.02 Transcript Type= protein_coding
chr3	51391268	51397908	51391268	51397908	+	ENST00000563281.1@RBM15B	ENST00000563281.1	protein_coding	51391268	51397908	Gene ID= ENSG00000259956.1 TPM= 46.7 Transcript Type= protein_coding
chr3	51538687	51663594	51538687	51663594	+	transcript3190.chr3.nnic@RAD54L2	transcript3190.chr3.nnic	protein_coding	51538687,51541589,51590367,51627553,51629334,51630272,51630705,51633577,51633902,51635593,51637161,51638144,51639419,51639881,51641749,51643875,51645024,51645591,51646285,51655971,51657580,51660026,51662426	51538915,51541650,51590559,51627754,51629473,51630388,51630931,51633759,51634035,51635789,51637503,51638321,51639670,51639999,51641867,51643974,51645229,51645763,51646481,51656170,51657669,51660118,51663594	Gene ID= ENSG00000164080.13 TPM= 3.5 Transcript Type= NA
chr3	51538709	51663594	51538709	51663594	+	transcript3191.chr3.nnic@RAD54L2	transcript3191.chr3.nnic	protein_coding	51538709,51541498,51590367,51627553,51629334,51630272,51630705,51633577,51633902,51635593,51637161,51638144,51639419,51639881,51641749,51643875,51645024,51645591,51646285,51655971,51657580,51660026,51662426	51538915,51541650,51590559,51627754,51629473,51630388,51630931,51633759,51634035,51635789,51637503,51638321,51639670,51639999,51641867,51643974,51645229,51645763,51646481,51656170,51657669,51660118,51663594	Gene ID= ENSG00000164080.13 TPM= 8.17 Transcript Type= NA
chr3	51538702	51663594	51538702	51663594	+	transcript3193.chr3.nnic@RAD54L2	transcript3193.chr3.nnic	protein_coding	51538702,51590367,51627553,51629334,51630272,51630705,51633577,51633902,51635593,51637161,51638144,51639419,51639881,51641749,51643875,51645024,51645591,51646285,51655971,51657580,51660026,51662426	51538915,51590559,51627754,51629473,51630388,51630931,51633759,51634035,51635789,51637503,51638321,51639670,51639999,51641867,51643974,51645229,51645763,51646481,51656170,51657669,51660118,51663594	Gene ID= ENSG00000164080.13 TPM= 10.51 Transcript Type= NA
chr3	51549734	51552183	51549734	51552183	-	transcript3215.chr3.nnic@NA	transcript3215.chr3.nnic	NA	51549734	51552183	Gene ID= novel_gene_chr3_3216 TPM= 3.5 Transcript Type= NA
chr3	51671175	51704322	51671175	51704322	+	ENST00000457573.5@TEX264	ENST00000457573.5	protein_coding	51671175,51672341,51674271,51684413,51699406,51703724	51671288,51672392,51674562,51684634,51699574,51704322	Gene ID= ENSG00000164081.12 TPM= 8.76 Transcript Type= protein_coding
chr3	51671175	51704322	51671175	51704322	+	ENST00000611400.4@TEX264	ENST00000611400.4	protein_coding	51671175,51672210,51674271,51684413,51699406,51703724	51671288,51672301,51674562,51684634,51699574,51704322	Gene ID= ENSG00000164081.12 TPM= 8.17 Transcript Type= protein_coding
chr3	51671245	51704323	51671245	51704323	+	transcript3201.chr3.nnic@TEX264	transcript3201.chr3.nnic	protein_coding	51671245,51672210,51674271,51684413,51699406,51703724	51671331,51672301,51674562,51684634,51699574,51704323	Gene ID= ENSG00000164081.12 TPM= 6.42 Transcript Type= NA
chr3	51671175	51704322	51671175	51704322	+	ENST00000614067.4@TEX264	ENST00000614067.4	protein_coding	51671175,51674271,51699406,51703724	51671288,51674562,51699574,51704322	Gene ID= ENSG00000164081.12 TPM= 2.8 Transcript Type= protein_coding
chr3	51671232	51704323	51671232	51704323	+	ENST00000341333.9@TEX264	ENST00000341333.9	protein_coding	51671232,51674271,51684413,51699406,51703724	51671288,51674562,51684634,51699574,51704323	Gene ID= ENSG00000164081.12 TPM= 108.59 Transcript Type= protein_coding
chr3	51671255	51704283	51671255	51704283	+	ENST00000415259.5@TEX264	ENST00000415259.5	protein_coding	51671255,51674271,51684413,51699406,51703724	51672301,51674562,51684634,51699574,51704283	Gene ID= ENSG00000164081.12 TPM= 2.34 Transcript Type= protein_coding
chr3	51933430	51941890	51933430	51941890	-	transcript3220.chr3.nnic@RRP9	transcript3220.chr3.nnic	protein_coding	51941781,51941409,51938095,51937669,51937545,51937192,51936442,51936257,51935592,51935342,51935197,51934631,51934472,51933708,51933430	51941890,51941491,51938204,51937736,51937586,51937318,51936555,51936349,51935692,51935476,51935259,51934776,51934551,51933781,51933599	Gene ID= ENSG00000114767.6 TPM= 2.34 Transcript Type= NA
chr3	51933433	51941933	51933433	51941933	-	transcript3227.chr3.nic@RRP9	transcript3227.chr3.nic	protein_coding	51941781,51941409,51938095,51937669,51937545,51937192,51936257,51935592,51935342,51935197,51933433	51941933,51941491,51938204,51937736,51937586,51937318,51936555,51935692,51935476,51935259,51934776	Gene ID= ENSG00000114767.6 TPM= 3.5 Transcript Type= NA
chr3	51933430	51941941	51933430	51941941	-	ENST00000232888.6@RRP9	ENST00000232888.6	protein_coding	51941781,51941409,51938095,51937669,51937545,51937192,51936431,51936257,51935592,51935342,51935197,51934631,51934472,51933708,51933430	51941941,51941491,51938204,51937736,51937586,51937318,51936555,51936349,51935692,51935476,51935259,51934776,51934551,51933781,51933599	Gene ID= ENSG00000114767.6 TPM= 49.04 Transcript Type= protein_coding
chr3	51942371	51948862	51942371	51948862	+	transcript3234.chr3.nic@PARP3	transcript3234.chr3.nic	protein_coding	51942371,51943349,51944089,51944390,51944778,51944998,51945495,51945853,51946166,51947740,51948311	51943046,51943538,51944217,51944578,51944910,51945224,51945644,51945939,51946343,51947895,51948862	Gene ID= ENSG00000041880.14 TPM= 5.35 Transcript Type= NA
chr3	51942371	51948862	51942371	51948862	+	transcript3237.chr3.nic@PARP3	transcript3237.chr3.nic	protein_coding	51942371,51943349,51944089,51944390,51944998,51945495,51945853,51946166,51947740,51948311	51943046,51943538,51944217,51944910,51945224,51945644,51945939,51946343,51947895,51948862	Gene ID= ENSG00000041880.14 TPM= 5.93 Transcript Type= NA
chr3	51942287	51948862	51942287	51948862	+	transcript3241.chr3.nic@PARP3	transcript3241.chr3.nic	protein_coding	51942287,51944089,51944390,51945495,51945853,51946166,51947740,51948311	51943538,51944217,51945224,51945644,51945939,51946343,51947895,51948862	Gene ID= ENSG00000041880.14 TPM= 3.21 Transcript Type= NA
chr3	51942371	51948603	51942371	51948603	+	ENST00000471971.5@PARP3	ENST00000471971.5	protein_coding	51942371,51943349,51944089,51944390,51944778,51944998,51945495,51945853,51946166,51947740,51948311	51942708,51943538,51944217,51944578,51944910,51945224,51945644,51945939,51946343,51947895,51948603	Gene ID= ENSG00000041880.14 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr3	51957495	51967516	51957495	51967516	-	transcript3250.chr3.nic@PCBP4	transcript3250.chr3.nic	protein_coding	51967326,51961941,51961160,51961010,51960866,51960526,51960189,51959895,51959577,51959367,51959229,51959047,51958790,51957495	51967516,51962088,51961304,51961033,51960898,51960642,51960320,51960023,51959651,51959411,51959292,51959099,51958959,51958152	Gene ID= ENSG00000090097.21 TPM= 4.67 Transcript Type= NA
chr3	51957495	51967514	51957495	51967514	-	transcript3258.chr3.nic@PCBP4	transcript3258.chr3.nic	protein_coding	51967326,51961160,51961010,51960866,51960526,51960189,51959895,51959577,51959367,51959229,51959047,51958790,51957495	51967514,51961270,51961033,51960898,51960642,51960320,51960023,51959651,51959411,51959292,51959099,51958959,51958152	Gene ID= ENSG00000090097.21 TPM= 2.34 Transcript Type= NA
chr3	51957495	51967410	51957495	51967410	-	transcript3259.chr3.nnic@PCBP4	transcript3259.chr3.nnic	protein_coding	51967228,51961160,51961010,51960866,51960526,51960189,51959895,51959577,51959367,51959229,51959047,51958790,51957495	51967410,51961304,51961033,51960898,51960642,51960320,51960023,51959651,51959411,51959292,51959099,51958959,51958152	Gene ID= ENSG00000090097.21 TPM= 2.34 Transcript Type= NA
chr3	51957495	51967515	51957495	51967515	-	transcript3260.chr3.nic@PCBP4	transcript3260.chr3.nic	protein_coding	51967326,51961160,51961010,51960866,51960526,51960189,51959895,51959577,51959367,51959229,51959047,51958790,51957495	51967515,51961304,51961033,51960898,51960642,51960320,51960023,51959651,51959411,51959292,51959099,51958959,51958152	Gene ID= ENSG00000090097.21 TPM= 11.68 Transcript Type= NA
chr3	51957458	51967515	51957458	51967515	-	transcript3262.chr3.nic@PCBP4	transcript3262.chr3.nic	protein_coding	51967326,51961160,51961010,51960866,51960526,51960189,51959577,51959367,51959229,51959047,51958790,51957458	51967515,51961304,51961033,51960898,51960642,51960320,51959651,51959411,51959292,51959099,51958959,51958349	Gene ID= ENSG00000090097.21 TPM= 5.84 Transcript Type= NA
chr3	51957454	51967457	51957454	51967457	-	ENST00000355852.6@PCBP4	ENST00000355852.6	protein_coding	51967326,51961160,51961010,51960866,51960526,51960189,51959895,51959577,51959367,51959229,51959047,51958790,51957454	51967457,51961304,51961033,51960898,51960642,51960320,51960023,51959651,51959411,51959292,51959099,51958959,51958349	Gene ID= ENSG00000090097.21 TPM= 32.11 Transcript Type= protein_coding
chr3	51957458	51967445	51957458	51967445	-	ENST00000461554.5@PCBP4	ENST00000461554.5	protein_coding	51967326,51961941,51961160,51961010,51960866,51960526,51960189,51959895,51959577,51959367,51959229,51959047,51958790,51957458	51967445,51962088,51961304,51961033,51960898,51960642,51960320,51960023,51959651,51959411,51959292,51959099,51958959,51958349	Gene ID= ENSG00000090097.21 TPM= 7.59 Transcript Type= protein_coding
chr3	51968510	51983409	51968510	51983409	-	ENST00000483233.5@ABHD14B	ENST00000483233.5	protein_coding	51983201,51973965,51971460,51969943,51968510	51983409,51974234,51971698,51970184,51969605	Gene ID= ENSG00000114779.19 TPM= 55.08 Transcript Type= protein_coding
chr3	51968516	51974630	51968516	51974630	-	ENST00000487005.1@ABHD14B	ENST00000487005.1	protein_coding	51973965,51969943,51968516	51974630,51970184,51969605	Gene ID= ENSG00000114779.19 TPM= 10.12 Transcript Type= processed_transcript
chr3	51968530	51974031	51968530	51974031	-	ENST00000395008.6@ABHD14B	ENST00000395008.6	protein_coding	51973965,51971460,51969943,51968530	51974031,51971892,51970184,51969605	Gene ID= ENSG00000114779.19 TPM= 4.87 Transcript Type= protein_coding
chr3	51973682	51981196	51973682	51981196	+	transcript3276.chr3.nic@ABHD14A	transcript3276.chr3.nic	protein_coding	51973682,51977871,51978259,51980393,51980836	51973905,51978082,51978374,51980628,51981196	Gene ID= ENSG00000248487.8 TPM= 3.5 Transcript Type= NA
chr3	51975068	51981196	51975068	51981196	+	ENST00000273596.7@ABHD14A	ENST00000273596.7	protein_coding	51975068,51977871,51978259,51980393,51980836	51975204,51978082,51978374,51980628,51981196	Gene ID= ENSG00000248487.8 TPM= 22.18 Transcript Type= protein_coding
chr3	51975060	51989174	51975060	51989174	+	ENST00000463937.1@ABHD14A-ACY1	ENST00000463937.1	protein_coding	51975060,51977871,51978259,51985207,51985361,51985852,51986255,51986415,51986605,51986988,51987147,51987309,51987556,51988524,51988766,51988911	51975204,51978082,51978374,51985271,51985465,51985946,51986331,51986504,51986661,51987061,51987196,51987453,51987624,51988603,51988826,51989174	Gene ID= ENSG00000114786.16 TPM= 1.17 Transcript Type= protein_coding
chr3	51983477	51989195	51983477	51989195	+	ENST00000404366.7@ACY1	ENST00000404366.7	protein_coding	51983477,51984047,51985207,51985361,51985852,51986255,51986415,51986605,51986988,51987147,51987309,51987556,51988524,51988766,51988911	51983584,51984158,51985271,51985465,51985946,51986331,51986504,51986661,51987061,51987196,51987453,51987624,51988603,51988826,51989195	Gene ID= ENSG00000243989.8 TPM= 4.67 Transcript Type= protein_coding
chr3	51993600	51995942	51993600	51995942	-	ENST00000294189.10@RPL29	ENST00000294189.10	protein_coding	51995857,51995425,51995042,51993600	51995942,51995469,51995106,51994126	Gene ID= ENSG00000162244.10 TPM= 294.23 Transcript Type= protein_coding
chr3	52022513	52026852	52022513	52026852	+	transcript3289.chr3.nnic@NA	transcript3289.chr3.nnic	NA	52022513	52026852	Gene ID= novel_gene_chr3_3290 TPM= 2.34 Transcript Type= NA
chr3	52048919	52056550	52048919	52056550	-	ENST00000495880.1@DUSP7	ENST00000495880.1	protein_coding	52055850,52053940,52048919	52056550,52054374,52051122	Gene ID= ENSG00000164086.9 TPM= 119.09 Transcript Type= protein_coding
chr3	52075286	52154690	52075286	52154690	-	ENST00000394970.6@POC1A	ENST00000394970.6	protein_coding	52154355,52151016,52149816,52149210,52146988,52145846,52138169,52125113,52122379,52075286	52154690,52151100,52149987,52149389,52147095,52145961,52138302,52125181,52122477,52075985	Gene ID= ENSG00000164087.7 TPM= 1.17 Transcript Type= protein_coding
chr3	52198094	52214327	52198094	52214327	+	ENST00000394965.6@ALAS1	ENST00000394965.6	protein_coding	52198094,52198672,52199221,52202507,52203863,52204693,52205839,52206572,52208083,52211283,52212258,52214020	52198255,52198848,52199440,52202734,52204012,52204915,52206023,52206751,52208247,52211551,52212420,52214327	Gene ID= ENSG00000023330.14 TPM= 4.67 Transcript Type= protein_coding
chr3	52198132	52214324	52198132	52214324	+	ENST00000310271.6@ALAS1	ENST00000310271.6	protein_coding	52198132,52199221,52202507,52203863,52204693,52205839,52206572,52208083,52211283,52212258,52214020	52198255,52199440,52202734,52204012,52204915,52206023,52206751,52208247,52211551,52212420,52214324	Gene ID= ENSG00000023330.14 TPM= 25.1 Transcript Type= protein_coding
chr3	52198144	52214292	52198144	52214292	+	ENST00000484952.5@ALAS1	ENST00000484952.5	protein_coding	52198144,52198672,52199210,52202507,52203863,52204693,52205839,52206572,52208083,52211283,52212258,52214020	52198255,52198848,52199440,52202734,52204012,52204915,52206023,52206751,52208247,52211551,52212420,52214292	Gene ID= ENSG00000023330.14 TPM= 35.61 Transcript Type= protein_coding
chr3	52228610	52239260	52228610	52239260	-	ENST00000305533.9@TWF2	ENST00000305533.9	protein_coding	52238992,52235029,52231944,52231444,52231127,52230870,52229920,52229661,52228610	52239260,52235106,52232122,52231539,52231231,52230995,52230070,52229782,52229201	Gene ID= ENSG00000247596.8 TPM= 182.14 Transcript Type= protein_coding
chr3	52246209	52250597	52246209	52250597	+	ENST00000409502.7@PPM1M	ENST00000409502.7	protein_coding	52246209,52246695,52247682,52248153,52248335,52248637,52248956,52249174,52249670	52246314,52246812,52247794,52248237,52248453,52248700,52249063,52249322,52250597	Gene ID= ENSG00000164088.17 TPM= 4.67 Transcript Type= protein_coding
chr3	52245793	52250595	52245793	52250595	+	ENST00000323588.8@PPM1M	ENST00000323588.8	protein_coding	52245793,52246695,52246974,52247682,52248153,52248335,52248637,52248956,52249174,52249670	52246048,52246812,52247228,52247794,52248237,52248453,52248700,52249063,52249322,52250595	Gene ID= ENSG00000164088.17 TPM= 86.4 Transcript Type= protein_coding
chr3	52254421	52278643	52254421	52278643	-	ENST00000296490.7@WDR82	ENST00000296490.7	protein_coding	52278201,52270712,52266952,52261380,52260385,52259717,52259197,52258536,52254421	52278643,52270809,52267018,52261479,52260501,52259872,52259266,52258678,52257519	Gene ID= ENSG00000164091.11 TPM= 17.51 Transcript Type= protein_coding
chr3	52277719	52281220	52277719	52281220	+	transcript3336.chr3.nnic@NA	transcript3336.chr3.nnic	NA	52277719	52281220	Gene ID= novel_gene_chr3_3337 TPM= 4.67 Transcript Type= NA
chr3	52287836	52293471	52287836	52293471	+	transcript3338.chr3.nic@GLYCTK	transcript3338.chr3.nic	protein_coding	52287836,52290304,52290960,52291747,52292260,52293046,52293307	52287876,52290719,52291111,52291922,52292569,52293192,52293471	Gene ID= ENSG00000168237.17 TPM= 2.34 Transcript Type= NA
chr3	52287820	52293475	52287820	52293475	+	ENST00000486393.5@GLYCTK	ENST00000486393.5	protein_coding	52287820,52290304,52290960,52291745,52292260	52287876,52290719,52291111,52291922,52293475	Gene ID= ENSG00000168237.17 TPM= 1.75 Transcript Type= nonsense_mediated_decay
chr3	52287806	52293475	52287806	52293475	+	transcript3345.chr3.nic@GLYCTK	transcript3345.chr3.nic	protein_coding	52287806,52290960,52291747,52292260	52287876,52291111,52291922,52293475	Gene ID= ENSG00000168237.17 TPM= 2.92 Transcript Type= NA
chr3	52287835	52293471	52287835	52293471	+	ENST00000471180.5@GLYCTK	ENST00000471180.5	protein_coding	52287835,52290960,52291747,52292260,52293046,52293307	52287876,52291111,52291922,52292569,52293192,52293471	Gene ID= ENSG00000168237.17 TPM= 1.17 Transcript Type= protein_coding
chr3	52312473	52314009	52312473	52314009	-	transcript3349.chr3.nnic@NA	transcript3349.chr3.nnic	NA	52312473	52314009	Gene ID= novel_gene_chr3_3350 TPM= 2.34 Transcript Type= NA
chr3	52401013	52410350	52401013	52410350	-	ENST00000460680.5@BAP1	ENST00000460680.5	protein_coding	52409842,52409714,52409554,52408474,52407958,52407399,52407174,52406829,52406253,52405765,52405110,52404453,52403416,52403138,52402779,52402602,52401013	52410350,52409743,52409608,52408606,52408077,52407460,52407316,52406907,52406376,52405912,52405294,52404586,52403894,52403298,52402871,52402674,52402421	Gene ID= ENSG00000163930.9 TPM= 100.51 Transcript Type= protein_coding
chr3	52401013	52410039	52401013	52410039	-	transcript3358.chr3.nnic@BAP1	transcript3358.chr3.nnic	protein_coding	52409842,52409714,52409554,52408474,52407958,52407399,52407174,52406829,52406253,52405765,52405110,52404453,52403416,52403183,52402779,52402602,52401013	52410039,52409743,52409608,52408606,52408077,52407460,52407316,52406907,52406376,52405912,52405294,52404586,52403894,52403298,52402871,52402674,52402421	Gene ID= ENSG00000163930.9 TPM= 11.77 Transcript Type= NA
chr3	52401013	52410039	52401013	52410039	-	transcript3359.chr3.nic@BAP1	transcript3359.chr3.nic	protein_coding	52409842,52409714,52409554,52408474,52407958,52407399,52407174,52406829,52406253,52405765,52405110,52404453,52403416,52403138,52402779,52402602,52401013	52410039,52409743,52409608,52408606,52408077,52407460,52407316,52406907,52406376,52405912,52405294,52404586,52403894,52403298,52402940,52402674,52402421	Gene ID= ENSG00000163930.9 TPM= 10.6 Transcript Type= NA
chr3	52401013	52405521	52401013	52405521	-	transcript3367.chr3.nic@BAP1	transcript3367.chr3.nic	protein_coding	52402779,52402602,52401013	52405521,52402674,52402421	Gene ID= ENSG00000163930.9 TPM= 11.38 Transcript Type= NA
chr3	52451102	52454070	52451102	52454070	-	ENST00000232975.7@TNNC1	ENST00000232975.7	protein_coding	52453992,52452483,52452106,52451744,52451391,52451102	52454070,52452513,52452252,52451858,52451527,52451306	Gene ID= ENSG00000114854.7 TPM= 68.89 Transcript Type= protein_coding
chr3	52455631	52481910	52455631	52481910	+	transcript3384.chr3.nnic@NISCH	transcript3384.chr3.nnic	protein_coding	52455631,52457843,52458662,52470859,52471814,52472303,52473734,52476447,52477574,52478097,52478373,52479749,52480184	52455734,52457926,52458844,52470907,52471977,52472398,52473829,52476599,52477642,52478282,52478577,52479862,52481910	Gene ID= ENSG00000010322.15 TPM= 4.29 Transcript Type= NA
chr3	52482354	52493068	52482354	52493068	+	transcript3388.chr3.nnic@NISCH	transcript3388.chr3.nnic	protein_coding	52482354,52484513,52485778,52487196,52489336,52490075,52490705,52491352,52491872	52482767,52484637,52485827,52488605,52489678,52490231,52490833,52491513,52493068	Gene ID= ENSG00000010322.15 TPM= 32.49 Transcript Type= NA
chr3	52480954	52493068	52480954	52493068	+	transcript3389.chr3.nic@NISCH	transcript3389.chr3.nic	protein_coding	52480954,52485778,52487196,52489336,52490075,52490705,52491352,52491872	52484637,52485827,52488605,52489678,52490231,52490833,52491513,52493068	Gene ID= ENSG00000010322.15 TPM= 31.91 Transcript Type= NA
chr3	52455508	52493071	52455508	52493071	+	ENST00000345716.8@NISCH	ENST00000345716.8	protein_coding	52455508,52457843,52458662,52470859,52471814,52472303,52473734,52476447,52477574,52478097,52478449,52479749,52480184,52484513,52485778,52487196,52489336,52490075,52490705,52491352,52491872	52455734,52457926,52458844,52470907,52471977,52472398,52473829,52476599,52477642,52478282,52478577,52479862,52480295,52484637,52485827,52488605,52489678,52490231,52490833,52491513,52493071	Gene ID= ENSG00000010322.15 TPM= 47.67 Transcript Type= protein_coding
chr3	52455617	52481910	52455617	52481910	+	ENST00000488380.5@NISCH	ENST00000488380.5	protein_coding	52455617,52457843,52458662,52470859,52471814,52472303,52473734,52476447,52477574,52478097,52478449,52479749,52480184	52455734,52457926,52458844,52470907,52471977,52472398,52473829,52476599,52477642,52478282,52478577,52479862,52481910	Gene ID= ENSG00000010322.15 TPM= 13.63 Transcript Type= protein_coding
chr3	52455617	52481914	52455617	52481914	+	ENST00000420808.2@NISCH	ENST00000420808.2	protein_coding	52455617,52457843,52458662,52470859,52471814,52472303,52473734,52476447,52477574,52478097,52478449,52479749,52480184,52480879	52455734,52457926,52458844,52470907,52471977,52472398,52473829,52476599,52477642,52478282,52478577,52479862,52480295,52481914	Gene ID= ENSG00000010322.15 TPM= 19.46 Transcript Type= protein_coding
chr3	52495338	52524495	52495338	52524495	+	ENST00000321725.10@STAB1	ENST00000321725.10	protein_coding	52495338,52501166,52501638,52502006,52502159,52502632,52502999,52503344,52503772,52504028,52504461,52504739,52505003,52505319,52505668,52505883,52506170,52506692,52507613,52507931,52508273,52509210,52509870,52510142,52510349,52511650,52512341,52512596,52512828,52513130,52513717,52513883,52514115,52514365,52514701,52514989,52515423,52516043,52516356,52516542,52516692,52516984,52517320,52517550,52517881,52518312,52518536,52518723,52519264,52519505,52519944,52520204,52520400,52520642,52520804,52521361,52521596,52521844,52522037,52522330,52522555,52522775,52523025,52523222,52523427,52523652,52523871,52524100,52524300	52495491,52501302,52501753,52502091,52502228,52502727,52503109,52503540,52503902,52504155,52504549,52504876,52505143,52505381,52505781,52505936,52506250,52506850,52507675,52508026,52508359,52509321,52510056,52510235,52510507,52511745,52512436,52512643,52512958,52513241,52513794,52513981,52514213,52514496,52514829,52515045,52515506,52516238,52516451,52516587,52516768,52517109,52517393,52517624,52518003,52518359,52518613,52518869,52519404,52519564,52520120,52520290,52520549,52520698,52521005,52521510,52521700,52521951,52522230,52522474,52522688,52522940,52523134,52523341,52523576,52523756,52524017,52524213,52524495	Gene ID= ENSG00000010327.10 TPM= 163.46 Transcript Type= protein_coding
chr3	52524385	52533829	52524385	52533829	-	transcript3424.chr3.nic@NT5DC2	transcript3424.chr3.nic	protein_coding	52533506,52529150,52528861,52528637,52528446,52528183,52528013,52527829,52527617,52527294,52525209,52524963,52524817,52524385	52533829,52529334,52528935,52528692,52528539,52528311,52528073,52527931,52527718,52527375,52525295,52525103,52524881,52524611	Gene ID= ENSG00000168268.10 TPM= 4.23 Transcript Type= NA
chr3	52524387	52535054	52524387	52535054	-	ENST00000307076.8@NT5DC2	ENST00000307076.8	protein_coding	52534533,52529150,52528861,52528637,52528446,52528183,52528013,52527829,52527617,52527294,52525209,52524963,52524817,52524387	52535054,52529334,52528935,52528692,52528539,52528311,52528073,52527931,52527718,52527375,52525295,52525103,52524881,52524731	Gene ID= ENSG00000168268.10 TPM= 13.81 Transcript Type= protein_coding
chr3	52524389	52533829	52524389	52533829	-	transcript3429.chr3.nnic@NT5DC2	transcript3429.chr3.nnic	protein_coding	52533506,52529150,52528861,52528637,52528446,52528183,52528013,52527829,52527617,52527294,52525209,52524963,52524817,52524389	52533829,52529334,52528981,52528692,52528539,52528311,52528073,52527931,52527718,52527375,52525295,52525103,52524881,52524731	Gene ID= ENSG00000168268.10 TPM= 5 Transcript Type= NA
chr3	52524389	52533777	52524389	52533777	-	ENST00000422318.6@NT5DC2	ENST00000422318.6	protein_coding	52533506,52529150,52528861,52528637,52528446,52528183,52528013,52527829,52527617,52527294,52525209,52524963,52524817,52524389	52533777,52529334,52528935,52528692,52528539,52528311,52528073,52527931,52527718,52527375,52525295,52525103,52524881,52524731	Gene ID= ENSG00000168268.10 TPM= 103.95 Transcript Type= protein_coding
chr3	52536605	52541891	52536605	52541891	+	ENST00000477703.5@SMIM4	ENST00000477703.5	protein_coding	52536605,52540424	52536906,52541891	Gene ID= ENSG00000168273.7 TPM= 17.51 Transcript Type= protein_coding
chr3	52536602	52540525	52536602	52540525	+	ENST00000307106.3@SMIM4	ENST00000307106.3	protein_coding	52536602,52540424	52536773,52540525	Gene ID= ENSG00000168273.7 TPM= 26.85 Transcript Type= protein_coding
chr3	52545352	52685970	52545352	52685970	-	transcript3401.chr3.nic@PBRM1	transcript3401.chr3.nic	protein_coding	52685749,52682092,52679574,52678500,52668498,52662133,52658199,52651742,52648344,52644704,52643248,52641954,52634602,52628894,52627273,52617262,52615351,52609313,52603521,52589070,52587353,52586425,52579054,52576541,52564050,52563283,52561767,52550747,52550421,52545352	52685970,52682233,52679726,52678597,52668645,52662276,52658315,52651810,52648442,52644789,52643343,52642045,52634815,52629035,52627370,52617538,52615456,52609955,52603732,52589255,52587510,52586688,52579199,52576698,52564233,52563493,52561968,52550817,52550637,52548235	Gene ID= ENSG00000163939.18 TPM= 8.17 Transcript Type= NA
chr3	52603534	52685970	52603534	52685970	-	transcript3407.chr3.nic@PBRM1	transcript3407.chr3.nic	protein_coding	52685749,52682092,52681704,52679574,52678500,52668498,52662133,52658199,52651742,52648344,52644704,52643248,52641954,52634602,52628894,52627273,52617262,52615351,52609313,52603534	52685970,52682233,52681820,52679726,52678597,52668645,52662276,52658315,52651810,52648442,52644789,52643343,52642045,52634815,52629035,52627370,52617538,52615456,52609955,52603732	Gene ID= ENSG00000163939.18 TPM= 2.34 Transcript Type= NA
chr3	52685648	52694459	52685648	52694459	+	transcript3413.chr3.nnic@GNL3	transcript3413.chr3.nnic	protein_coding	52685648,52686769,52687246,52687502,52688109,52689074,52690592,52690945,52691542,52692872,52693187,52693408,52693632,52694037,52694193	52686055,52686827,52687383,52687615,52688192,52689206,52690704,52691071,52691629,52693046,52693329,52693544,52693807,52694103,52694459	Gene ID= ENSG00000163938.16 TPM= 4.67 Transcript Type= NA
chr3	52686016	52694492	52686016	52694492	+	ENST00000394799.6@GNL3	ENST00000394799.6	protein_coding	52686016,52686769,52687246,52687502,52688109,52689074,52690592,52690945,52691542,52692872,52693187,52693408,52693632,52694037,52694193	52686202,52686827,52687383,52687615,52688192,52689206,52690704,52691071,52691629,52693046,52693329,52693544,52693807,52694103,52694492	Gene ID= ENSG00000163938.16 TPM= 2.34 Transcript Type= protein_coding
chr3	52694489	52705800	52694489	52705800	-	transcript3441.chr3.nnic@GLT8D1	transcript3441.chr3.nnic	protein_coding	52705447,52703799,52700445,52700262,52697721,52696542,52696234,52695928,52695421,52695190,52694489	52705800,52703928,52700496,52700360,52697934,52696659,52696318,52696040,52695587,52695302,52695035	Gene ID= ENSG00000016864.18 TPM= 2.34 Transcript Type= NA
chr3	52694489	52706030	52694489	52706030	-	transcript3442.chr3.nic@GLT8D1	transcript3442.chr3.nic	protein_coding	52705447,52704724,52700445,52700262,52697721,52696542,52696234,52695928,52695421,52695190,52694489	52706030,52704952,52700496,52700360,52697934,52696659,52696318,52696040,52695587,52695302,52695035	Gene ID= ENSG00000016864.18 TPM= 25.69 Transcript Type= NA
chr3	52692217	52705565	52692217	52705565	-	transcript3459.chr3.nnic@GLT8D1	transcript3459.chr3.nnic	protein_coding	52705447,52700445,52700262,52697721,52696542,52693602,52692217	52705565,52700496,52700360,52697934,52696659,52696040,52693513	Gene ID= ENSG00000016864.18 TPM= 2.34 Transcript Type= NA
chr3	52694488	52705799	52694488	52705799	-	transcript3460.chr3.nic@GLT8D1	transcript3460.chr3.nic	protein_coding	52705447,52700445,52700262,52697721,52696542,52696234,52694488	52705799,52700496,52700360,52697934,52696659,52696318,52696040	Gene ID= ENSG00000016864.18 TPM= 2.34 Transcript Type= NA
chr3	52694488	52705786	52694488	52705786	-	ENST00000266014.10@GLT8D1	ENST00000266014.10	protein_coding	52705447,52700445,52700262,52697721,52696542,52696234,52695928,52695421,52695190,52694488	52705786,52700496,52700360,52697934,52696659,52696318,52696040,52695587,52695302,52695035	Gene ID= ENSG00000016864.18 TPM= 11.68 Transcript Type= protein_coding
chr3	52694503	52705781	52694503	52705781	-	ENST00000491606.5@GLT8D1	ENST00000491606.5	protein_coding	52705699,52700445,52700262,52697721,52696542,52696234,52695928,52695421,52695190,52694503	52705781,52700496,52700360,52697934,52696659,52696318,52696040,52695587,52695302,52695035	Gene ID= ENSG00000016864.18 TPM= 2.34 Transcript Type= protein_coding
chr3	52705841	52708179	52705841	52708179	+	ENST00000233025.11@SPCS1	ENST00000233025.11	protein_coding	52705841,52706644,52706793,52707687	52706282,52706703,52706879,52708179	Gene ID= ENSG00000114902.13 TPM= 106.25 Transcript Type= protein_coding
chr3	52705636	52711146	52705636	52711146	+	ENST00000619898.4@SPCS1	ENST00000619898.4	protein_coding	52705636,52706644,52706793,52707687	52706282,52706703,52706879,52711146	Gene ID= ENSG00000114902.13 TPM= 5.84 Transcript Type= protein_coding
chr3	52706078	52708166	52706078	52708166	+	ENST00000602728.1@SPCS1	ENST00000602728.1	protein_coding	52706078,52706644,52706793,52707687	52706282,52706703,52706879,52708166	Gene ID= ENSG00000114902.13 TPM= 3.5 Transcript Type= protein_coding
chr3	52708449	52770949	52708449	52770949	-	ENST00000233027.9@NEK4	ENST00000233027.9	protein_coding	52770654,52768338,52766178,52765887,52763470,52760795,52751932,52749692,52746734,52746061,52744239,52743352,52741411,52739429,52737586,52708449	52770949,52768604,52766375,52765994,52763624,52760936,52752336,52749829,52746904,52746210,52744305,52743461,52741499,52739634,52737719,52711869	Gene ID= ENSG00000114904.12 TPM= 21.02 Transcript Type= protein_coding
chr3	52710788	52770939	52710788	52770939	-	transcript3437.chr3.nnic@NEK4	transcript3437.chr3.nnic	protein_coding	52770654,52768338,52766178,52765887,52763470,52760795,52752791,52752223,52741411,52739429,52737586,52710788	52770939,52768604,52766375,52765994,52763624,52760936,52752893,52752336,52741840,52739634,52737719,52711869	Gene ID= ENSG00000114904.12 TPM= 2.34 Transcript Type= NA
chr3	52794768	52809009	52794768	52809009	+	ENST00000621946.4@ITIH3	ENST00000621946.4	protein_coding	52794768,52795603,52796481,52796739,52797105,52797817,52798966,52799372,52799753,52800538,52800965,52802334,52802667,52803855,52805808,52806103,52806293,52806901,52807747,52808110,52808552	52794896,52795623,52796647,52796843,52797267,52797930,52799091,52799488,52799921,52800663,52801146,52802519,52802806,52804019,52805840,52806138,52806406,52807105,52807916,52808221,52809009	Gene ID= ENSG00000162267.12 TPM= 1.17 Transcript Type= protein_coding
chr3	52802094	52809009	52802094	52809009	+	transcript3475.chr3.nic@ITIH3	transcript3475.chr3.nic	protein_coding	52802094,52802667,52803855,52804726,52805808,52806103,52806293,52806901,52807747,52808110,52808552	52802519,52802806,52804009,52804734,52805840,52806138,52806406,52807105,52807916,52808221,52809009	Gene ID= ENSG00000162267.12 TPM= 2.34 Transcript Type= NA
chr3	52813282	52835729	52813282	52835729	-	ENST00000468472.1@AC006254.1	ENST00000468472.1	protein_coding	52834940,52833617,52833383,52833114,52831408,52830553,52829119,52827093,52826791,52826541,52825886,52824842,52824397,52824190,52823823,52823556,52820991,52820631,52820291,52818052,52816884,52814209,52813975,52813282	52835729,52833749,52833430,52833247,52831478,52830670,52829279,52827197,52826953,52826651,52826014,52824958,52824565,52824315,52824004,52823741,52821130,52820785,52820317,52819990,52817058,52814363,52814071,52813490	Gene ID= ENSG00000243696.4 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr3	52813282	52819919	52813282	52819919	-	transcript3494.chr3.nnic@AC006254.1	transcript3494.chr3.nnic	protein_coding	52818052,52816884,52813975,52813282	52819919,52817058,52814071,52813490	Gene ID= ENSG00000243696.4 TPM= 2.34 Transcript Type= NA
chr3	52833121	52840262	52833121	52840262	-	ENST00000495552.1@TMEM110-MUSTN1	ENST00000495552.1	protein_coding	52835789,52834940,52833617,52833121	52840262,52835302,52833749,52833430	Gene ID= ENSG00000248592.7 TPM= 4.67 Transcript Type= retained_intron
chr3	52836756	52897590	52836756	52897590	-	transcript3480.chr3.nic@TMEM110	transcript3480.chr3.nic	protein_coding	52897291,52895878,52855396,52852603,52849792,52844829,52843721,52842811,52836756	52897590,52895955,52855444,52852698,52849913,52844941,52843798,52842960,52840610	Gene ID= ENSG00000213533.11 TPM= 7.01 Transcript Type= NA
chr3	52836756	52897596	52836756	52897596	-	ENST00000355083.9@TMEM110	ENST00000355083.9	protein_coding	52897291,52855396,52852603,52849792,52844829,52843721,52842811,52836756	52897596,52855444,52852698,52849913,52844941,52843798,52842960,52840610	Gene ID= ENSG00000213533.11 TPM= 32.69 Transcript Type= protein_coding
chr3	52847257	52897601	52847257	52897601	-	transcript3493.chr3.nic@TMEM110	transcript3493.chr3.nic	protein_coding	52897291,52855396,52852603,52849792,52847257	52897601,52855444,52852698,52849913,52847551	Gene ID= ENSG00000213533.11 TPM= 2.34 Transcript Type= NA
chr3	52911003	53046076	52911003	53046076	-	transcript3509.chr3.nic@SFMBT1	transcript3509.chr3.nic	protein_coding	53045816,52969101,52954317,52943353,52934813,52932062,52930941,52930329,52928191,52926031,52921705,52920537,52918484,52916150,52913478,52912538,52911003	53046076,52969258,52954411,52943593,52934901,52932308,52931035,52930430,52928341,52926113,52921831,52920650,52918526,52916214,52913617,52912647,52911178	Gene ID= ENSG00000163935.13 TPM= 2.34 Transcript Type= NA
chr3	53088483	53130462	53088483	53130462	-	ENST00000296292.7@RFT1	ENST00000296292.7	protein_coding	53130338,53125909,53123724,53122374,53121699,53119884,53111830,53106819,53105673,53103953,53099381,53092369,53088483	53130462,53125994,53123840,53122563,53121800,53120021,53111908,53106869,53105803,53104097,53099486,53092618,53092070	Gene ID= ENSG00000163933.9 TPM= 3.5 Transcript Type= protein_coding
chr3	53161203	53192717	53161203	53192717	+	transcript3520.chr3.nnic@PRKCD	transcript3520.chr3.nnic	protein_coding	53161203,53165104,53173493,53178404,53179577,53181207,53181444,53181701,53183121,53183452,53184874,53185604,53185927,53186167,53186604,53187340,53188720,53189058,53189873,53192108	53161428,53165215,53173608,53178537,53179776,53181267,53181606,53181732,53183206,53183581,53184974,53185700,53186027,53186340,53186695,53187402,53188858,53189246,53190001,53192717	Gene ID= ENSG00000163932.13 TPM= 17.51 Transcript Type= NA
chr3	53161199	53192554	53161199	53192554	+	ENST00000330452.7@PRKCD	ENST00000330452.7	protein_coding	53161199,53165104,53178404,53179577,53181207,53181444,53181701,53183121,53183452,53184874,53185604,53185927,53186167,53186604,53187340,53188720,53189058,53189873,53192108	53161428,53165215,53178537,53179776,53181267,53181606,53181732,53183206,53183581,53184974,53185700,53186027,53186340,53186695,53187402,53188858,53189246,53190001,53192554	Gene ID= ENSG00000163932.13 TPM= 9.34 Transcript Type= protein_coding
chr3	53161209	53192717	53161209	53192717	+	transcript3532.chr3.nnic@PRKCD	transcript3532.chr3.nnic	protein_coding	53161209,53173493,53178404,53179577,53181207,53181444,53181701,53183121,53183452,53184874,53185604,53185927,53186167,53186604,53187340,53188720,53189058,53189873,53192108	53161428,53173608,53178537,53179776,53181267,53181606,53181732,53183206,53183581,53184974,53185700,53186027,53186340,53186695,53187402,53188858,53189246,53190001,53192717	Gene ID= ENSG00000163932.13 TPM= 12.84 Transcript Type= NA
chr3	53161120	53192717	53161120	53192717	+	ENST00000394729.6@PRKCD	ENST00000394729.6	protein_coding	53161120,53178404,53179577,53181207,53181444,53181701,53183121,53183452,53184874,53185604,53185927,53186167,53186604,53187340,53188720,53189058,53189873,53192108	53161428,53178537,53179776,53181267,53181606,53181732,53183206,53183581,53184974,53185700,53186027,53186340,53186695,53187402,53188858,53189246,53190001,53192717	Gene ID= ENSG00000163932.13 TPM= 59.55 Transcript Type= protein_coding
chr3	53168665	53192717	53168665	53192717	+	transcript3547.chr3.nnic@PRKCD	transcript3547.chr3.nnic	protein_coding	53168665,53178404,53179577,53181207,53181444,53181701,53183121,53183452,53184874,53185604,53185927,53186167,53186604,53187340,53188720,53189058,53189873,53192108	53168811,53178537,53179776,53181267,53181606,53181732,53183206,53183581,53184974,53185700,53186027,53186340,53186695,53187402,53188858,53189246,53190001,53192717	Gene ID= ENSG00000163932.13 TPM= 16.73 Transcript Type= NA
chr3	53224714	53256000	53224714	53256000	-	ENST00000423525.6@TKT	ENST00000423525.6	protein_coding	53255836,53242125,53241132,53240251,53234983,53233156,53231357,53230457,53229280,53229007,53228276,53228056,53226756,53225751,53224714	53256000,53242242,53241245,53240348,53235174,53233274,53231550,53230621,53229436,53229137,53228359,53228149,53226878,53225931,53225609	Gene ID= ENSG00000163931.15 TPM= 25.69 Transcript Type= protein_coding
chr3	53225657	53256022	53225657	53256022	-	ENST00000423516.5@TKT	ENST00000423516.5	protein_coding	53255836,53242125,53241132,53240251,53237797,53234983,53233156,53231357,53230457,53229280,53229007,53228276,53228056,53226756,53225657	53256022,53242242,53241245,53240348,53237820,53235174,53233274,53231550,53230621,53229436,53229137,53228359,53228149,53226878,53225931	Gene ID= ENSG00000163931.15 TPM= 169.69 Transcript Type= protein_coding
chr3	53225657	53256022	53225657	53256022	-	ENST00000450814.6@TKT	ENST00000450814.6	protein_coding	53255836,53242125,53241132,53240251,53234983,53233156,53231357,53230457,53229280,53229007,53228276,53228056,53226756,53225657	53256022,53242242,53241245,53240348,53235064,53233274,53231550,53230621,53229436,53229137,53228359,53228149,53226878,53225931	Gene ID= ENSG00000163931.15 TPM= 12.06 Transcript Type= nonsense_mediated_decay
chr3	53287370	53347525	53287370	53347525	-	ENST00000294241.10@DCP1A	ENST00000294241.10	protein_coding	53347383,53344902,53342144,53319407,53312241,53292069,53290791,53288065,53287370	53347525,53344942,53342271,53319473,53312379,53292827,53290856,53288283,53287660	Gene ID= ENSG00000272886.5 TPM= 2.34 Transcript Type= protein_coding
chr3	53816360	53846440	53816360	53846440	-	transcript3635.chr3.nnic@CHDH	transcript3635.chr3.nnic	protein_coding	53845822,53840929,53823306,53822491,53821647,53820474,53819532,53818938,53816360	53846440,53840999,53824067,53822642,53821776,53820608,53819674,53819040,53818195	Gene ID= ENSG00000016391.10 TPM= 4.67 Transcript Type= NA
chr3	53816841	53846469	53816841	53846469	-	transcript3646.chr3.nic@CHDH	transcript3646.chr3.nic	protein_coding	53846083,53840929,53823306,53822491,53821647,53820474,53818938,53816841	53846469,53840999,53824067,53822642,53821776,53820608,53819674,53818195	Gene ID= ENSG00000016391.10 TPM= 3.5 Transcript Type= NA
chr3	53845786	53865595	53845786	53865595	+	transcript3630.chr3.nnic@IL17RB	transcript3630.chr3.nnic	protein_coding	53845786,53848664,53849655,53851999,53852871,53855294,53856844,53857616,53860130,53864879	53846648,53848688,53849795,53852126,53852997,53855341,53856986,53858818,53860228,53865595	Gene ID= ENSG00000056736.9 TPM= 2.34 Transcript Type= NA
chr3	53846584	53865588	53846584	53865588	+	ENST00000475124.1@IL17RB	ENST00000475124.1	protein_coding	53846584,53848664,53849655,53851999,53852871,53855294,53856844,53857616,53860130,53864746	53846648,53848688,53849795,53852126,53852997,53855341,53856986,53858818,53860228,53865588	Gene ID= ENSG00000056736.9 TPM= 1.17 Transcript Type= retained_intron
chr3	53867066	53882202	53867066	53882202	-	ENST00000335754.7@ACTR8	ENST00000335754.7	protein_coding	53881979,53879939,53878357,53877647,53877214,53876620,53875948,53874211,53873032,53872384,53871232,53869982,53867066	53882202,53880109,53878467,53877751,53877387,53876713,53876080,53874364,53873127,53872524,53871496,53870145,53868862	Gene ID= ENSG00000113812.13 TPM= 1.17 Transcript Type= protein_coding
chr3	53868502	53881824	53868502	53881824	-	ENST00000482349.5@ACTR8	ENST00000482349.5	protein_coding	53881666,53879939,53878357,53877647,53877214,53876620,53875948,53874211,53873032,53872384,53871232,53869982,53868502	53881824,53880072,53878467,53877751,53877387,53876713,53876080,53874364,53873127,53872524,53871496,53870145,53868862	Gene ID= ENSG00000113812.13 TPM= 1.17 Transcript Type= protein_coding
chr3	53885200	53891962	53885200	53891962	-	ENST00000541726.5@SELENOK	ENST00000541726.5	protein_coding	53891770,53888393,53886851,53885834,53885826,53885200	53891962,53888483,53886934,53885912,53885830,53885561	Gene ID= ENSG00000113811.10 TPM= 58.38 Transcript Type= protein_coding
chr3	53884410	53891988	53884410	53891988	-	ENST00000495461.5@SELENOK	ENST00000495461.5	protein_coding	53891770,53888393,53886851,53885826,53884410	53891988,53888483,53886934,53885912,53885561	Gene ID= ENSG00000113811.10 TPM= 17.51 Transcript Type= protein_coding
chr3	53885301	53891865	53885301	53891865	-	ENST00000488746.1@SELENOK	ENST00000488746.1	protein_coding	53891770,53888393,53886851,53885826,53885301	53891865,53888483,53886934,53885904,53885561	Gene ID= ENSG00000113811.10 TPM= 4.67 Transcript Type= nonsense_mediated_decay
chr3	54122127	54879184	54122127	54879184	+	transcript3656.chr3.nic@CACNA2D3	transcript3656.chr3.nic	protein_coding	54122127,54123513,54320442,54386715,54503492,54562800,54569795,54569954,54581803,54627787,54642128,54752599,54764218,54816853,54837159,54838568,54846393,54871539,54879018	54122835,54123594,54320558,54386774,54503654,54562931,54569855,54570104,54581877,54627876,54642241,54752677,54764351,54816870,54837230,54838648,54846467,54871622,54879184	Gene ID= ENSG00000157445.14 TPM= 8.17 Transcript Type= NA
chr3	54122552	54766951	54122552	54766951	+	transcript3658.chr3.nic@CACNA2D3	transcript3658.chr3.nic	protein_coding	54122552,54122630,54123513,54320442,54386715,54503492,54562800,54569795,54569954,54581803,54627787,54642128,54752599,54764218	54122580,54122835,54123594,54320558,54386774,54503654,54562931,54569855,54570104,54581877,54627876,54642241,54752677,54766951	Gene ID= ENSG00000157445.14 TPM= 4.67 Transcript Type= NA
chr3	56557222	56621818	56557222	56621818	+	transcript3676.chr3.nnic@CCDC66	transcript3676.chr3.nnic	protein_coding	56557222,56558846,56559569,56563684,56566594,56566950,56571181,56592970,56593491,56593944,56598190,56613589,56615128,56615922,56617112,56618172,56619271,56619777,56621532	56557253,56558910,56559594,56564125,56566759,56567053,56571302,56593101,56593741,56594028,56598300,56613750,56615272,56616053,56617605,56618212,56619527,56619901,56621818	Gene ID= ENSG00000180376.16 TPM= 2.34 Transcript Type= NA
chr3	56557173	56621797	56557173	56621797	+	ENST00000394672.7@CCDC66	ENST00000394672.7	protein_coding	56557173,56558846,56559569,56563684,56566594,56566950,56571181,56592970,56593491,56593944,56613589,56615128,56615922,56617112,56618172,56619271,56619777,56621532	56557253,56558910,56559594,56564125,56566759,56567053,56571302,56593101,56593741,56594028,56613750,56615272,56616053,56617605,56618212,56619527,56619901,56621797	Gene ID= ENSG00000180376.16 TPM= 9.34 Transcript Type= protein_coding
chr3	56650348	56653287	56650348	56653287	+	transcript3692.chr3.nnic@NA	transcript3692.chr3.nnic	NA	56650348	56653287	Gene ID= novel_gene_chr3_3693 TPM= 11.68 Transcript Type= NA
chr3	56682047	56683265	56682047	56683265	-	transcript3694.chr3.nnic@NA	transcript3694.chr3.nnic	NA	56682047	56683265	Gene ID= novel_gene_chr3_3695 TPM= 3.5 Transcript Type= NA
chr3	56727418	57079308	56727418	57079308	-	ENST00000338458.8@ARHGEF3	ENST00000338458.8	protein_coding	57079226,57035088,56958823,56882292,56773709,56754981,56753504,56751300,56751056,56745205,56737185,56732238,56727418	57079308,57035176,56958889,56882354,56773816,56755151,56753566,56751396,56751132,56745462,56737355,56732424,56729622	Gene ID= ENSG00000163947.11 TPM= 8.76 Transcript Type= protein_coding
chr3	56727418	56801967	56727418	56801967	-	ENST00000296315.7@ARHGEF3	ENST00000296315.7	protein_coding	56801703,56773709,56754981,56753504,56751300,56751056,56745205,56737185,56732238,56727418	56801967,56773816,56755151,56753566,56751396,56751132,56745462,56737355,56732424,56729622	Gene ID= ENSG00000163947.11 TPM= 22.77 Transcript Type= protein_coding
chr3	56731593	56801949	56731593	56801949	-	ENST00000495373.5@ARHGEF3	ENST00000495373.5	protein_coding	56801703,56773709,56754981,56753504,56751300,56751056,56745205,56737185,56731593	56801949,56773816,56755151,56753566,56751396,56751132,56745462,56737355,56732424	Gene ID= ENSG00000163947.11 TPM= 1.17 Transcript Type= protein_coding
chr3	57227737	57273468	57227737	57273468	+	ENST00000288266.7@APPL1	ENST00000288266.7	protein_coding	57227737,57235566,57237492,57238045,57240465,57242101,57242856,57246076,57247395,57248193,57249360,57252269,57253682,57256957,57257246,57259028,57259845,57260117,57260628,57267742,57268398,57269541	57227937,57235664,57237551,57238116,57240552,57242142,57242914,57246222,57247477,57248351,57249548,57252311,57253738,57257051,57257428,57259080,57260019,57260153,57260774,57267792,57268487,57273468	Gene ID= ENSG00000157500.10 TPM= 51.37 Transcript Type= protein_coding
chr3	57227874	57242892	57227874	57242892	+	ENST00000444459.1@APPL1	ENST00000444459.1	protein_coding	57227874,57230714,57235566,57237492,57238045,57240465,57242101,57242856	57227937,57230767,57235664,57237551,57238116,57240552,57242142,57242892	Gene ID= ENSG00000157500.10 TPM= 1.17 Transcript Type= protein_coding
chr3	57571363	57597408	57571363	57597408	-	ENST00000303436.10@ARF4	ENST00000303436.10	protein_coding	57597074,57584384,57583898,57577316,57575548,57571363	57597408,57584464,57584007,57577387,57575673,57572298	Gene ID= ENSG00000168374.10 TPM= 112.09 Transcript Type= protein_coding
chr3	57591895	57595962	57591895	57595962	+	transcript3738.chr3.nnic@NA	transcript3738.chr3.nnic	NA	57591895	57595962	Gene ID= novel_gene_chr3_3739 TPM= 3.5 Transcript Type= NA
chr3	57625454	57693087	57625454	57693087	-	transcript3740.chr3.nnic@DENND6A	transcript3740.chr3.nnic	protein_coding	57692782,57672400,57672256,57666123,57663636,57661446,57660760,57659118,57657680,57646316,57645661,57641653,57634704,57634558,57633265,57630925,57630715,57630421,57628811,57627940,57625454	57693087,57672438,57672298,57666235,57663716,57661551,57660839,57659180,57657735,57646438,57645756,57641747,57634769,57634622,57633354,57630978,57630824,57630523,57628885,57628345,57626449	Gene ID= ENSG00000174839.12 TPM= 2.34 Transcript Type= NA
chr3	57625457	57693087	57625457	57693087	-	transcript3741.chr3.nic@DENND6A	transcript3741.chr3.nic	protein_coding	57692782,57672400,57672256,57666123,57663636,57661446,57660760,57657680,57646316,57645661,57641653,57634704,57634558,57633265,57630925,57630715,57630421,57628811,57625457	57693087,57672438,57672298,57666235,57663716,57661551,57660839,57657735,57646438,57645756,57641747,57634769,57634622,57633354,57630978,57630824,57630523,57628885,57628345	Gene ID= ENSG00000174839.12 TPM= 2.34 Transcript Type= NA
chr3	57756247	57929126	57756247	57929126	+	transcript3744.chr3.nic@SLMAP	transcript3744.chr3.nic	protein_coding	57756247,57756548,57831383,57841299,57847197,57849754,57857733,57858088,57860699,57861949,57864548,57864807,57865242,57871636,57890041,57896511,57896873,57909076,57912381,57913158,57916906,57922889,57925845,57927296	57756342,57757849,57831530,57841371,57847233,57849816,57857828,57858159,57860839,57862086,57864716,57864857,57865292,57871698,57890100,57896591,57896932,57909150,57912701,57913275,57917077,57923023,57925934,57929126	Gene ID= ENSG00000163681.14 TPM= 6.07 Transcript Type= NA
chr3	57756247	57929126	57756247	57929126	+	transcript3745.chr3.nic@SLMAP	transcript3745.chr3.nic	protein_coding	57756247,57756548,57831383,57841299,57847197,57849754,57857733,57858088,57860699,57861949,57864548,57864807,57871636,57890041,57896511,57896873,57907884,57909076,57912381,57913158,57916906,57922889,57925845,57927296	57756342,57757849,57831530,57841371,57847233,57849816,57857828,57858159,57860839,57862086,57864716,57864857,57871698,57890100,57896591,57896932,57908006,57909150,57912701,57913275,57917077,57923023,57925934,57929126	Gene ID= ENSG00000163681.14 TPM= 6.07 Transcript Type= NA
chr3	57756308	57929126	57756308	57929126	+	transcript3746.chr3.nnic@SLMAP	transcript3746.chr3.nnic	protein_coding	57756308,57756548,57831383,57841299,57847197,57849754,57857733,57858088,57860699,57861949,57864548,57864807,57890041,57896511,57896873,57907884,57909076,57912381,57913158,57916906,57922889,57925845,57927296	57756342,57757849,57831530,57841371,57847233,57849816,57857828,57858159,57860839,57862086,57864716,57864857,57890100,57896591,57896932,57908006,57909150,57912701,57913275,57917077,57923023,57925934,57929126	Gene ID= ENSG00000163681.14 TPM= 6.07 Transcript Type= NA
chr3	57756230	57929168	57756230	57929168	+	ENST00000295951.7@SLMAP	ENST00000295951.7	protein_coding	57756230,57756548,57831383,57841299,57847197,57849754,57857733,57858088,57860699,57861949,57864548,57871636,57890041,57896511,57896873,57907884,57909076,57912381,57913158,57916906,57922889,57927296	57756342,57757849,57831530,57841371,57847233,57849816,57857828,57858159,57860839,57862086,57864716,57871698,57890100,57896591,57896932,57908006,57909150,57912701,57913275,57917077,57923023,57929168	Gene ID= ENSG00000163681.14 TPM= 2.57 Transcript Type= protein_coding
chr3	57756298	57929126	57756298	57929126	+	transcript3750.chr3.nic@SLMAP	transcript3750.chr3.nic	protein_coding	57756298,57756548,57831383,57841299,57847197,57849754,57857733,57858088,57860699,57861949,57864548,57890041,57896511,57896873,57907884,57909076,57912381,57913158,57916906,57922889,57925845,57927296	57756342,57757849,57831530,57841371,57847233,57849816,57857828,57858159,57860839,57862086,57864716,57890100,57896591,57896932,57908006,57909150,57912701,57913275,57917077,57923023,57925934,57929126	Gene ID= ENSG00000163681.14 TPM= 4.9 Transcript Type= NA
chr3	57890041	57929126	57890041	57929126	+	ENST00000417128.5@SLMAP	ENST00000417128.5	protein_coding	57890041,57896511,57896873,57907884,57909076,57912381,57913158,57916906,57922889,57925845,57927296	57890100,57896591,57896932,57908006,57909150,57912701,57913275,57917077,57923023,57925934,57929126	Gene ID= ENSG00000163681.14 TPM= 5.84 Transcript Type= protein_coding
chr3	58047569	58049344	58047569	58049344	-	transcript3762.chr3.nnic@NA	transcript3762.chr3.nnic	NA	58047569	58049344	Gene ID= novel_gene_chr3_3763 TPM= 2.34 Transcript Type= NA
chr3	58144255	58148763	58144255	58148763	-	transcript3764.chr3.nnic@NA	transcript3764.chr3.nnic	NA	58144255	58148763	Gene ID= novel_gene_chr3_3765 TPM= 2.34 Transcript Type= NA
chr3	58191381	58192805	58191381	58192805	-	transcript3775.chr3.nnic@NA	transcript3775.chr3.nnic	NA	58191381	58192805	Gene ID= novel_gene_chr3_3776 TPM= 2.34 Transcript Type= NA
chr3	58192628	58211235	58192628	58211235	-	transcript3766.chr3.nic@DNASE1L3	transcript3766.chr3.nic	protein_coding	58211160,58210766,58208218,58205471,58204769,58200997,58197821,58193343,58192628	58211235,58211003,58208306,58205560,58204881,58201109,58197978,58193439,58192803	Gene ID= ENSG00000163687.13 TPM= 3.5 Transcript Type= NA
chr3	58192628	58211223	58192628	58211223	-	ENST00000394549.6@DNASE1L3	ENST00000394549.6	protein_coding	58210766,58208218,58205471,58204769,58200997,58197821,58193343,58192628	58211223,58208306,58205560,58204881,58201109,58197978,58193439,58192803	Gene ID= ENSG00000163687.13 TPM= 108.59 Transcript Type= protein_coding
chr3	58209594	58210202	58209594	58210202	+	transcript3773.chr3.nnic@NA	transcript3773.chr3.nnic	NA	58209594	58210202	Gene ID= novel_gene_chr3_3774 TPM= 2.34 Transcript Type= NA
chr3	58237506	58294732	58237506	58294732	+	ENST00000478253.5@ABHD6	ENST00000478253.5	protein_coding	58237506,58249878,58256562,58267189,58269321,58270932,58274658,58285085,58285353,58293589	58237916,58249942,58256705,58267345,58269434,58271064,58274815,58285139,58285453,58294732	Gene ID= ENSG00000163686.14 TPM= 21.6 Transcript Type= protein_coding
chr3	58237532	58294734	58237532	58294734	+	ENST00000295962.8@ABHD6	ENST00000295962.8	protein_coding	58237532,58256562,58267189,58269321,58270932,58274658,58285085,58285353,58293589	58237916,58256705,58267345,58269434,58271064,58274815,58285139,58285453,58294734	Gene ID= ENSG00000163686.14 TPM= 18.1 Transcript Type= protein_coding
chr3	58306262	58324695	58306262	58324695	+	ENST00000445193.7@RPP14	ENST00000445193.7	protein_coding	58306262,58310309,58310507,58316515,58316915,58317440	58306651,58310406,58310591,58316591,58316993,58324695	Gene ID= ENSG00000163684.11 TPM= 4.67 Transcript Type= protein_coding
chr3	58306314	58318472	58306314	58318472	+	ENST00000481972.5@HTD2	ENST00000481972.5	protein_coding	58306314,58310507,58316515,58316915,58317440	58306417,58310591,58316591,58316993,58318472	Gene ID= ENSG00000255154.7 TPM= 1.17 Transcript Type= protein_coding
chr3	58332870	58426023	58332870	58426023	+	transcript3802.chr3.nic@PXK	transcript3802.chr3.nic	protein_coding	58332870,58365874,58369431,58382514,58390582,58391147,58391773,58394998,58395658,58397039,58397605,58399299,58403862,58408924,58409532,58410090,58412904,58424752	58333090,58365924,58369478,58382700,58390659,58391220,58391847,58395102,58395759,58397200,58397722,58399377,58403910,58409001,58409618,58410159,58412963,58426023	Gene ID= ENSG00000168297.15 TPM= 15.18 Transcript Type= NA
chr3	58332880	58425151	58332880	58425151	+	ENST00000356151.6@PXK	ENST00000356151.6	protein_coding	58332880,58365874,58369431,58382514,58390582,58391147,58391773,58394998,58395658,58397039,58397605,58399299,58403862,58408924,58409532,58410090,58412901,58424752	58333090,58365924,58369478,58382700,58390659,58391220,58391847,58395102,58395759,58397200,58397722,58399377,58403910,58409001,58409618,58410159,58412963,58425151	Gene ID= ENSG00000168297.15 TPM= 2.34 Transcript Type= protein_coding
chr3	58427630	58433852	58427630	58433852	-	ENST00000302746.10@PDHB	ENST00000302746.10	protein_coding	58433768,58433631,58431877,58431731,58431593,58430657,58430128,58429708,58428473,58427630	58433852,58433684,58431984,58431793,58431628,58430942,58430238,58429799,58428614,58428179	Gene ID= ENSG00000168291.12 TPM= 100.41 Transcript Type= protein_coding
chr3	58427630	58433857	58427630	58433857	-	ENST00000383714.8@PDHB	ENST00000383714.8	protein_coding	58433768,58431877,58431731,58431593,58430657,58430128,58429708,58428473,58427630	58433857,58431984,58431793,58431628,58430942,58430238,58429799,58428614,58428179	Gene ID= ENSG00000168291.12 TPM= 3.5 Transcript Type= protein_coding
chr3	58427692	58433839	58427692	58433839	-	ENST00000461692.5@PDHB	ENST00000461692.5	protein_coding	58433631,58431877,58431731,58431593,58430657,58430128,58429708,58428473,58427692	58433839,58431984,58431793,58431628,58430942,58430238,58429799,58428614,58428179	Gene ID= ENSG00000168291.12 TPM= 3.5 Transcript Type= retained_intron
chr3	58492114	58502352	58492114	58502352	+	ENST00000404589.7@KCTD6	ENST00000404589.7	protein_coding	58492114,58498713,58500946	58492169,58498782,58502352	Gene ID= ENSG00000168301.12 TPM= 12.84 Transcript Type= protein_coding
chr3	58492119	58502327	58492119	58502327	+	ENST00000490264.1@KCTD6	ENST00000490264.1	protein_coding	58492119,58494153,58498713,58500946	58492169,58494408,58498782,58502327	Gene ID= ENSG00000168301.12 TPM= 1.17 Transcript Type= protein_coding
chr3	58505136	58537319	58505136	58537319	-	ENST00000302819.9@ACOX2	ENST00000302819.9	protein_coding	58537119,58534947,58534360,58533994,58533445,58531693,58531251,58530466,58528794,58526466,58524426,58522496,58517206,58508893,58505136	58537319,58535197,58534522,58534145,58533552,58531812,58531366,58530638,58528956,58526656,58524605,58522601,58517423,58509025,58505286	Gene ID= ENSG00000168306.12 TPM= 24.9 Transcript Type= protein_coding
chr3	58505136	58537218	58505136	58537218	-	transcript3836.chr3.nic@ACOX2	transcript3836.chr3.nic	protein_coding	58537119,58533445,58531693,58531251,58530466,58528794,58526466,58524426,58522496,58517206,58508893,58505136	58537218,58535197,58531812,58531366,58530638,58528956,58526656,58524605,58522601,58517423,58509025,58505286	Gene ID= ENSG00000168306.12 TPM= 5.06 Transcript Type= NA
chr3	58505136	58537218	58505136	58537218	-	transcript3837.chr3.nic@ACOX2	transcript3837.chr3.nic	protein_coding	58537119,58533994,58533445,58531693,58531251,58528794,58526466,58524426,58522496,58517206,58508893,58505136	58537218,58535197,58533552,58531812,58531366,58528956,58526656,58524605,58522601,58517423,58509025,58505286	Gene ID= ENSG00000168306.12 TPM= 5.06 Transcript Type= NA
chr3	58564117	58577764	58564117	58577764	-	ENST00000394481.5@FAM107A	ENST00000394481.5	protein_coding	58577309,58570326,58569691,58567208,58564117	58577764,58570423,58569865,58567364,58566695	Gene ID= ENSG00000168309.16 TPM= 31.53 Transcript Type= protein_coding
chr3	58564117	58577764	58564117	58577764	-	ENST00000360997.6@FAM107A	ENST00000360997.6	protein_coding	58577309,58569691,58567208,58564117	58577764,58569865,58567364,58566695	Gene ID= ENSG00000168309.16 TPM= 53.71 Transcript Type= protein_coding
chr3	58633946	58666848	58633946	58666848	-	ENST00000358781.6@FAM3D	ENST00000358781.6	protein_coding	58666576,58655551,58653674,58649315,58645509,58643662,58640127,58637141,58636294,58633946	58666848,58655601,58653781,58649338,58645626,58643720,58640177,58637225,58636420,58634368	Gene ID= ENSG00000198643.6 TPM= 1.17 Transcript Type= protein_coding
chr3	59749310	61251413	59749310	61251413	-	ENST00000476844.5@FHIT	ENST00000476844.5	protein_coding	61251301,61200617,61042047,60821919,60536860,60014007,60011371,59922346,59752221,59749310	61251413,61200665,61042099,60822011,60536979,60014152,60011400,59922414,59752321,59749568	Gene ID= ENSG00000189283.9 TPM= 1.17 Transcript Type= protein_coding
chr3	59749310	61251450	59749310	61251450	-	ENST00000492590.5@FHIT	ENST00000492590.5	protein_coding	61251301,61200617,61042047,60821919,60536860,60014007,60011371,59922346,59752221,59749310	61251450,61200665,61042099,60822011,60536979,60014152,60011400,59922414,59752321,59749579	Gene ID= ENSG00000189283.9 TPM= 4.67 Transcript Type= protein_coding
chr3	60709164	60822013	60709164	60822013	-	transcript3857.chr3.nnic@FHIT	transcript3857.chr3.nnic	protein_coding	60821919,60766941,60765524,60716547,60709164	60822013,60767098,60765563,60716642,60710072	Gene ID= ENSG00000189283.9 TPM= 2.34 Transcript Type= NA
chr3	61563161	61567681	61563161	61567681	+	transcript3862.chr3.nnic@NA	transcript3862.chr3.nnic	NA	61563161	61567681	Gene ID= novel_gene_chr3_3863 TPM= 9.34 Transcript Type= NA
chr3	61580383	61581435	61580383	61581435	-	transcript3864.chr3.nnic@NA	transcript3864.chr3.nnic	NA	61580383	61581435	Gene ID= novel_gene_chr3_3865 TPM= 3.5 Transcript Type= NA
chr3	61742455	61743106	61742455	61743106	-	ENST00000472730.1@AC096919.1	ENST00000472730.1	processed_pseudogene	61742455	61743106	Gene ID= ENSG00000226360.5 TPM= 233.52 Transcript Type= processed_pseudogene
chr3	61801362	61804693	61801362	61804693	+	transcript3866.chr3.nnic@NA	transcript3866.chr3.nnic	NA	61801362	61804693	Gene ID= novel_gene_chr3_3867 TPM= 2.34 Transcript Type= NA
chr3	61561911	62297613	61561911	62297613	+	ENST00000474889.5@PTPRG	ENST00000474889.5	protein_coding	61561911,61748878,61989625,62003349,62078163,62132602,62157067,62167971,62191469,62195062,62201505,62203173,62218851,62231225,62243807,62255124,62262798,62267410,62267685,62269035,62271383,62272946,62273698,62275873,62276972,62277551,62281563,62282727,62292421,62293161	61562372,61748982,61989804,62003497,62078258,62132668,62157224,62168163,62191653,62195170,62201554,62203950,62218983,62231311,62243898,62255215,62262894,62267492,62267819,62269169,62271555,62273081,62273844,62275966,62277048,62277679,62281709,62282869,62292556,62297613	Gene ID= ENSG00000144724.19 TPM= 7.82 Transcript Type= protein_coding
chr3	61989624	62297613	61989624	62297613	+	transcript3872.chr3.nic@PTPRG	transcript3872.chr3.nic	protein_coding	61989624,62003349,62078163,62132602,62157067,62167971,62191469,62195062,62201505,62203173,62218851,62243807,62255124,62262798,62267410,62267685,62269035,62271383,62272946,62273698,62275873,62276972,62277551,62281563,62282727,62292421,62293161	61989804,62003497,62078258,62132668,62157224,62168163,62191653,62195170,62201554,62203950,62218983,62243898,62255215,62262894,62267492,62267819,62269169,62271555,62273081,62273844,62275966,62277048,62277679,62281709,62282869,62292556,62297613	Gene ID= ENSG00000144724.19 TPM= 22.62 Transcript Type= NA
chr3	61561911	62293329	61561911	62293329	+	ENST00000295874.14@PTPRG	ENST00000295874.14	protein_coding	61561911,61748878,61989625,62003349,62078163,62132602,62157067,62167971,62191469,62195062,62201505,62203173,62218851,62243807,62255124,62262798,62267410,62267685,62269035,62271383,62272946,62273698,62275873,62276972,62277551,62281563,62282727,62292421,62293161	61562372,61748982,61989804,62003497,62078258,62132668,62157224,62168163,62191653,62195170,62201554,62203950,62218983,62243898,62255215,62262894,62267492,62267819,62269169,62271555,62273081,62273844,62275966,62277048,62277679,62281709,62282869,62292556,62293329	Gene ID= ENSG00000144724.19 TPM= 1.4 Transcript Type= protein_coding
chr3	61989624	62135286	61989624	62135286	+	transcript3876.chr3.nic@PTPRG	transcript3876.chr3.nic	protein_coding	61989624,62003349,62078163,62132602	61989804,62003497,62078258,62135286	Gene ID= ENSG00000144724.19 TPM= 2.34 Transcript Type= NA
chr3	62319043	62336213	62319043	62336213	+	ENST00000494481.5@C3orf14	ENST00000494481.5	protein_coding	62319043,62319721,62320460,62321930,62331325,62333255	62319232,62319832,62320524,62322053,62331399,62336213	Gene ID= ENSG00000114405.10 TPM= 1.17 Transcript Type= protein_coding
chr3	62319721	62333646	62319721	62333646	+	ENST00000542214.2@C3orf14	ENST00000542214.2	protein_coding	62319721,62320460,62321930,62331325,62333255	62319832,62320524,62322053,62331399,62333646	Gene ID= ENSG00000114405.10 TPM= 2.34 Transcript Type= protein_coding
chr3	63833870	63863792	63833870	63863792	-	transcript3892.chr3.nic@THOC7	transcript3892.chr3.nic	protein_coding	63863504,63839656,63838372,63837976,63836301,63835324,63835154,63833870	63863792,63839773,63838499,63838062,63836358,63835390,63835223,63834199	Gene ID= ENSG00000163634.11 TPM= 2.34 Transcript Type= NA
chr3	63833870	63863903	63833870	63863903	-	ENST00000295899.9@THOC7	ENST00000295899.9	protein_coding	63863772,63839656,63838372,63837976,63836301,63835324,63835154,63833870	63863903,63839773,63838499,63838062,63836358,63835390,63835223,63834199	Gene ID= ENSG00000163634.11 TPM= 37.36 Transcript Type= protein_coding
chr3	63912105	63996636	63912105	63996636	+	transcript3886.chr3.nic@ATXN7	transcript3886.chr3.nic	protein_coding	63912105,63912588,63913157,63952379,63979915,63982186,63982939,63988059,63990176,63990738,63995505	63912181,63912923,63913225,63952483,63980167,63982445,63983021,63988324,63990374,63990859,63996636	Gene ID= ENSG00000163635.17 TPM= 7.59 Transcript Type= NA
chr3	63911929	64000207	63911929	64000207	+	ENST00000487717.5@ATXN7	ENST00000487717.5	protein_coding	63911929,63912588,63913157,63952379,63979915,63982186,63982939,63988059,63990176,63990738,63995505,63999450	63912181,63912923,63913225,63952483,63980167,63982445,63983021,63988324,63990374,63990859,63996483,64000207	Gene ID= ENSG00000163635.17 TPM= 2.92 Transcript Type= protein_coding
chr3	63998206	64001886	63998206	64001886	+	transcript3897.chr3.nnic@NA	transcript3897.chr3.nnic	NA	63998206	64001886	Gene ID= novel_gene_chr3_3898 TPM= 2.34 Transcript Type= NA
chr3	64010549	64023560	64010549	64023560	-	ENST00000295901.8@PSMD6	ENST00000295901.8	protein_coding	64023275,64022318,64019296,64018818,64018599,64013439,64010878,64010549	64023560,64022523,64019441,64019037,64018707,64013607,64010955,64010764	Gene ID= ENSG00000163636.10 TPM= 101.58 Transcript Type= protein_coding
chr3	64010555	64023472	64010555	64023472	-	ENST00000492933.5@PSMD6	ENST00000492933.5	protein_coding	64023275,64022643,64022318,64019296,64018818,64018599,64013439,64010878,64010555	64023472,64022801,64022523,64019441,64019037,64018707,64013607,64010955,64010764	Gene ID= ENSG00000163636.10 TPM= 10.51 Transcript Type= protein_coding
chr3	64010555	64023437	64010555	64023437	-	ENST00000476464.5@PSMD6	ENST00000476464.5	protein_coding	64022318,64019296,64018818,64018599,64013439,64010878,64010555	64023437,64019441,64019037,64018707,64013607,64010955,64010764	Gene ID= ENSG00000163636.10 TPM= 4.67 Transcript Type= retained_intron
chr3	64095260	64098491	64095260	64098491	+	transcript3904.chr3.nnic@NA	transcript3904.chr3.nnic	NA	64095260	64098491	Gene ID= novel_gene_chr3_3905 TPM= 207.83 Transcript Type= NA
chr3	64515654	64688000	64515654	64688000	-	ENST00000498707.5@ADAMTS9	ENST00000498707.5	protein_coding	64687543,64686568,64681201,64658502,64655792,64655576,64654572,64654353,64651017,64649637,64647940,64641848,64633698,64633472,64631808,64631455,64622420,64622198,64621114,64615960,64615321,64613345,64606960,64604227,64603922,64601944,64596830,64594258,64568368,64561578,64550892,64546758,64541838,64541526,64541320,64541095,64539203,64533166,64522166,64515654	64688000,64686968,64681363,64658791,64655875,64655691,64654612,64654458,64651163,64649778,64648044,64641993,64633879,64633608,64631925,64631550,64622586,64622327,64621240,64616170,64615485,64613509,64607079,64604331,64604089,64602213,64596991,64594434,64568535,64561751,64551062,64546952,64541970,64541620,64541414,64541228,64539294,64533270,64522260,64517121	Gene ID= ENSG00000163638.13 TPM= 12.84 Transcript Type= protein_coding
chr3	65354884	65622091	65354884	65622091	-	transcript3924.chr3.nnic@MAGI1	transcript3924.chr3.nnic	protein_coding	65621972,65493512,65478592,65470283,65453258,65448022,65442792,65439879,65437155,65430699,65429520,65401439,65391142,65383532,65381877,65379261,65375745,65364853,65364665,65363465,65361199,65354884	65622091,65493631,65478798,65470484,65453340,65448057,65442849,65440012,65437247,65430881,65430140,65401470,65391358,65383623,65382069,65379554,65375912,65364946,65364725,65363608,65361337,65357132	Gene ID= ENSG00000151276.23 TPM= 2.92 Transcript Type= NA
chr3	65354231	65622090	65354231	65622090	-	ENST00000621418.4@MAGI1	ENST00000621418.4	protein_coding	65621972,65493512,65478592,65470283,65453258,65448022,65442792,65439879,65437155,65430699,65429520,65401439,65391142,65383532,65381877,65379261,65375745,65364853,65364665,65363465,65361199,65354231	65622090,65493631,65478798,65470484,65453340,65448057,65442849,65440012,65437247,65430881,65430140,65401470,65391358,65383623,65382069,65379554,65375945,65364946,65364725,65363608,65361337,65357132	Gene ID= ENSG00000151276.23 TPM= 1.17 Transcript Type= protein_coding
chr3	65354884	65622091	65354884	65622091	-	transcript3928.chr3.nnic@MAGI1	transcript3928.chr3.nnic	protein_coding	65621972,65493512,65478592,65470283,65453258,65442792,65439879,65437155,65430699,65429520,65401439,65391142,65383532,65381877,65379261,65375745,65364853,65364665,65363465,65361199,65354884	65622091,65493631,65478798,65470484,65453340,65442849,65440012,65437247,65430881,65430140,65401470,65391358,65383623,65382069,65379554,65375912,65364946,65364725,65363608,65361337,65357132	Gene ID= ENSG00000151276.23 TPM= 4.09 Transcript Type= NA
chr3	65356160	65622091	65356160	65622091	-	transcript3931.chr3.nic@MAGI1	transcript3931.chr3.nic	protein_coding	65621972,65493512,65478592,65470283,65453258,65448022,65442792,65439879,65437155,65430699,65429520,65401439,65391142,65383532,65381877,65379261,65364853,65364665,65363465,65361199,65356160	65622091,65493631,65478798,65470484,65453340,65448057,65442849,65440012,65437247,65430881,65430140,65401470,65391358,65383623,65382069,65379554,65364946,65364725,65363608,65361337,65357132	Gene ID= ENSG00000151276.23 TPM= 2.34 Transcript Type= NA
chr3	65354884	65622091	65354884	65622091	-	transcript3933.chr3.nic@MAGI1	transcript3933.chr3.nic	protein_coding	65621972,65493512,65478592,65470283,65453258,65442792,65439879,65437155,65430699,65429520,65401439,65391142,65383532,65381877,65379261,65364853,65364665,65363465,65361199,65354884	65622091,65493631,65478798,65470484,65453340,65442849,65440012,65437247,65430881,65430140,65401470,65391358,65383623,65382069,65379554,65364946,65364725,65363608,65361337,65357132	Gene ID= ENSG00000151276.23 TPM= 8.17 Transcript Type= NA
chr3	65452582	66038834	65452582	66038834	-	ENST00000464060.5@MAGI1	ENST00000464060.5	protein_coding	66037996,65621972,65493512,65478592,65470283,65452582	66038834,65622088,65493631,65478798,65470487,65453340	Gene ID= ENSG00000151276.23 TPM= 3.5 Transcript Type= retained_intron
chr3	65975303	65978729	65975303	65978729	+	transcript3940.chr3.nnic@NA	transcript3940.chr3.nnic	NA	65975303	65978729	Gene ID= novel_gene_chr3_3941 TPM= 2.34 Transcript Type= NA
chr3	66038626	66038842	66038626	66038842	-	transcript3942.chr3.nnic@NA	transcript3942.chr3.nnic	NA	66038626	66038842	Gene ID= novel_gene_chr3_3943 TPM= 3.5 Transcript Type= NA
chr3	66133610	66378927	66133610	66378927	+	ENST00000354883.10@SLC25A26	ENST00000354883.10	protein_coding	66133610,66220742,66236544,66243203,66262051,66263332,66346364,66362860,66369478,66370529,66377690	66133984,66221127,66236700,66243312,66262155,66263379,66346408,66362929,66369542,66370602,66378927	Gene ID= ENSG00000144741.17 TPM= 2.34 Transcript Type= protein_coding
chr3	66221012	66378079	66221012	66378079	+	ENST00000336733.10@SLC25A26	ENST00000336733.10	protein_coding	66221012,66243203,66262051,66263332,66346364,66362860,66369478,66370529,66377690	66221127,66243312,66262155,66263379,66346408,66362929,66369542,66370602,66378079	Gene ID= ENSG00000144741.17 TPM= 5.84 Transcript Type= protein_coding
chr3	66378797	66499980	66378797	66499980	-	transcript3945.chr3.nnic@LRIG1	transcript3945.chr3.nnic	protein_coding	66499883,66462438,66451559,66417129,66414920,66412871,66410129,66407348,66405198,66398970,66398112,66394040,66385981,66383991,66382982,66382273,66381479,66380577,66378797	66499980,66462509,66451633,66417266,66415063,66413014,66410272,66407491,66405278,66399041,66398183,66394203,66386301,66384272,66383401,66382398,66381631,66380861,66380489	Gene ID= ENSG00000144749.13 TPM= 11.09 Transcript Type= NA
chr3	66378797	66501056	66378797	66501056	-	transcript3949.chr3.nnic@LRIG1	transcript3949.chr3.nnic	protein_coding	66500190,66462438,66451559,66417129,66414920,66412871,66407348,66405198,66398970,66398112,66394040,66385981,66383991,66382982,66382273,66381479,66380577,66378797	66501056,66462509,66451633,66417266,66415063,66413014,66407491,66405278,66399041,66398183,66394203,66386301,66384272,66383401,66382398,66381631,66380861,66380489	Gene ID= ENSG00000144749.13 TPM= 12.26 Transcript Type= NA
chr3	66378797	66501056	66378797	66501056	-	transcript3950.chr3.nnic@LRIG1	transcript3950.chr3.nnic	protein_coding	66500190,66462438,66451559,66417129,66414920,66412871,66410129,66407348,66405198,66398112,66394040,66385981,66383991,66382982,66382273,66381479,66380577,66378797	66501056,66462509,66451633,66417266,66415063,66413014,66410272,66407491,66405278,66398183,66394203,66386301,66384272,66383401,66382398,66381631,66380861,66380489	Gene ID= ENSG00000144749.13 TPM= 13.43 Transcript Type= NA
chr3	66378797	66500932	66378797	66500932	-	ENST00000273261.7@LRIG1	ENST00000273261.7	protein_coding	66500190,66462438,66451559,66417129,66414920,66412871,66410129,66407348,66405198,66398970,66398112,66394040,66385981,66383991,66382982,66382273,66381479,66380577,66378797	66500932,66462509,66451633,66417266,66415063,66413014,66410272,66407491,66405278,66399041,66398183,66394203,66386301,66384272,66383401,66382398,66381631,66380861,66380489	Gene ID= ENSG00000144749.13 TPM= 47.29 Transcript Type= protein_coding
chr3	66998307	67011210	66998307	67011210	+	ENST00000417314.2@KBTBD8	ENST00000417314.2	protein_coding	66998307,66998981,67003195,67007922	66998371,66999191,67004309,67011210	Gene ID= ENSG00000163376.11 TPM= 3.5 Transcript Type= protein_coding
chr3	67374719	67654614	67374719	67654614	-	ENST00000307227.9@SUCLG2	ENST00000307227.9	protein_coding	67654503,67609455,67529087,67528132,67520482,67518247,67508807,67498134,67495798,67400731,67374719	67654614,67609596,67529186,67528222,67520634,67518336,67508903,67498295,67495940,67400851,67375859	Gene ID= ENSG00000172340.14 TPM= 117.93 Transcript Type= protein_coding
chr3	68975214	69013961	68975214	69013961	-	ENST00000383701.7@EOGT	ENST00000383701.7	protein_coding	69013574,69012515,69011936,69009637,69008428,69007713,69005140,69004378,69001608,68998011,68988925,68988506,68988295,68987445,68982811,68979668,68978333,68975214	69013961,69012799,69011991,69009860,69008528,69007821,69005234,69004482,69001714,68998114,68989017,68988577,68988381,68987513,68982872,68979787,68978435,68977764	Gene ID= ENSG00000163378.13 TPM= 12.84 Transcript Type= protein_coding
chr3	68975232	69013708	68975232	69013708	-	transcript3981.chr3.nic@EOGT	transcript3981.chr3.nic	protein_coding	69013574,69012603,69011936,69009637,69008428,69007713,69005140,69004378,69001608,68998011,68988925,68988506,68988295,68987445,68982811,68979668,68978333,68975232	69013708,69012799,69011991,69009860,69008528,69007821,69005234,69004482,69001714,68998114,68989017,68988577,68988381,68987513,68982872,68979787,68978435,68977764	Gene ID= ENSG00000163378.13 TPM= 5.84 Transcript Type= NA
chr3	68975227	68977157	68975227	68977157	-	ENST00000615922.1@EOGT	ENST00000615922.1	protein_coding	68975227	68977157	Gene ID= ENSG00000163378.13 TPM= 1.17 Transcript Type= protein_coding
chr3	69011195	69013709	69011195	69013709	-	transcript3990.chr3.nnic@NA	transcript3990.chr3.nnic	NA	69011195	69013709	Gene ID= novel_gene_chr3_3991 TPM= 2.34 Transcript Type= NA
chr3	69012840	69018054	69012840	69018054	+	transcript3984.chr3.nnic@NA	transcript3984.chr3.nnic	NA	69012840	69018054	Gene ID= novel_gene_chr3_3985 TPM= 4.67 Transcript Type= NA
chr3	69019830	69052312	69019830	69052312	-	transcript3992.chr3.nnic@TMF1	transcript3992.chr3.nnic	protein_coding	69051945,69047358,69044492,69043750,69042807,69039551,69038843,69038564,69035023,69033548,69029815,69028226,69027900,69025996,69025560,69024055,69023145,69019830	69052312,69048562,69044595,69043876,69042912,69039693,69039009,69038720,69035115,69033704,69030007,69028295,69027992,69026097,69025712,69024180,69023320,69021977	Gene ID= ENSG00000144747.15 TPM= 2.92 Transcript Type= NA
chr3	69019827	69052303	69019827	69052303	-	ENST00000398559.6@TMF1	ENST00000398559.6	protein_coding	69051945,69047358,69044492,69043750,69042807,69039551,69038843,69038564,69035023,69033548,69029815,69028226,69027900,69025996,69025560,69024055,69019827	69052303,69048562,69044595,69043876,69042912,69039693,69039009,69038720,69035115,69033704,69030007,69028295,69027992,69026097,69025712,69024180,69023320	Gene ID= ENSG00000144747.15 TPM= 12.26 Transcript Type= protein_coding
chr3	69054730	69080408	69054730	69080408	-	ENST00000361055.8@UBA3	ENST00000361055.8	protein_coding	69080334,69080112,69077798,69075430,69071535,69067928,69064068,69063439,69062982,69062077,69061814,69057256,69056779,69056612,69056183,69056000,69055851,69054730	69080408,69080153,69077918,69075510,69071617,69068008,69064111,69063503,69063137,69062179,69061927,69057309,69056815,69056693,69056283,69056063,69055905,69055525	Gene ID= ENSG00000144744.16 TPM= 55.46 Transcript Type= protein_coding
chr3	69054730	69080408	69054730	69080408	-	ENST00000349511.8@UBA3	ENST00000349511.8	protein_coding	69080334,69077798,69075430,69071535,69067928,69064068,69063439,69062982,69062077,69061814,69057256,69056779,69056612,69056183,69056000,69055851,69054730	69080408,69077918,69075510,69071617,69068008,69064111,69063503,69063137,69062179,69061927,69057309,69056815,69056693,69056283,69056063,69055905,69055525	Gene ID= ENSG00000144744.16 TPM= 16.93 Transcript Type= protein_coding
chr3	69084944	69106066	69084944	69106066	+	ENST00000273258.3@ARL6IP5	ENST00000273258.3	protein_coding	69084944,69101839,69104464	69085223,69102056,69106066	Gene ID= ENSG00000144746.6 TPM= 332.76 Transcript Type= protein_coding
chr3	69170264	69542662	69170264	69542662	-	transcript4025.chr3.nic@FRMD4B	transcript4025.chr3.nic	protein_coding	69542206,69432634,69313452,69311263,69302343,69287752,69250043,69249226,69224607,69221858,69218322,69216263,69198698,69196900,69196255,69195231,69195022,69193648,69189896,69187770,69182598,69180899,69176524,69170264	69542662,69432761,69313517,69311357,69302435,69287836,69250099,69249248,69224690,69221923,69218379,69216349,69198774,69197038,69196396,69195364,69195141,69193873,69189952,69187917,69182717,69181710,69176656,69171981	Gene ID= ENSG00000114541.14 TPM= 8.96 Transcript Type= NA
chr3	69170264	69353685	69170264	69353685	-	transcript4029.chr3.nic@FRMD4B	transcript4029.chr3.nic	protein_coding	69353544,69313452,69311263,69302343,69287752,69250043,69249226,69224607,69221858,69218322,69216263,69198698,69196900,69196255,69195231,69195022,69193648,69189896,69187770,69182598,69180899,69176524,69170264	69353685,69313517,69311357,69302435,69287836,69250099,69249248,69224690,69221923,69218379,69216349,69198774,69197038,69196396,69195364,69195141,69193873,69189952,69187917,69182717,69181710,69176656,69171981	Gene ID= ENSG00000114541.14 TPM= 4.29 Transcript Type= NA
chr3	69170264	69237187	69170264	69237187	-	transcript4035.chr3.nnic@FRMD4B	transcript4035.chr3.nnic	protein_coding	69237097,69224607,69221858,69218322,69216263,69198698,69196900,69196255,69195231,69195022,69193648,69189896,69187770,69182598,69180899,69176524,69170264	69237187,69224690,69221923,69218379,69216349,69198774,69197038,69196396,69195364,69195141,69193873,69189952,69187917,69182717,69181710,69176656,69171981	Gene ID= ENSG00000114541.14 TPM= 4.29 Transcript Type= NA
chr3	69389912	69391404	69389912	69391404	-	transcript4046.chr3.nnic@NA	transcript4046.chr3.nnic	NA	69389912	69391404	Gene ID= novel_gene_chr3_4047 TPM= 2.34 Transcript Type= NA
chr3	69739435	69968336	69739435	69968336	+	ENST00000352241.8@MITF	ENST00000352241.8	protein_coding	69739435,69879134,69937822,69939098,69941236,69949051,69951830,69956455,69959273,69964847	69739701,69879383,69938049,69939181,69941331,69949168,69951886,69956530,69959420,69968336	Gene ID= ENSG00000187098.14 TPM= 33.86 Transcript Type= protein_coding
chr3	69866261	69968336	69866261	69968336	+	transcript4056.chr3.nic@MITF	transcript4056.chr3.nic	protein_coding	69866261,69879134,69937822,69939098,69941236,69949051,69951812,69956455,69959273,69964847	69866346,69879383,69938049,69939181,69941331,69949168,69951886,69956530,69959420,69968336	Gene ID= ENSG00000187098.14 TPM= 5.84 Transcript Type= NA
chr3	70959191	71306053	70959191	71306053	-	transcript4066.chr3.nic@FOXP1	transcript4066.chr3.nic	protein_coding	71305878,71299820,71198202,71112536,71053636,71052537,71046942,71041328,71015549,71000972,70987994,70977828,70977643,70976941,70972555,70970736,70965890,70959191	71306053,71299880,71198392,71112637,71053773,71052626,71047095,71041532,71015653,71001059,70988077,70978029,70977722,70977042,70972676,70970805,70966056,70959391	Gene ID= ENSG00000114861.18 TPM= 5.06 Transcript Type= NA
chr3	70959191	71130837	70959191	71130837	-	ENST00000491238.5@FOXP1	ENST00000491238.5	protein_coding	71130498,71112536,71053636,71052537,71046942,71041328,71015549,71000972,70987994,70977828,70977643,70976941,70972555,70970736,70965890,70959191	71130837,71112637,71053773,71052626,71047095,71041532,71015653,71001059,70988077,70978029,70977722,70977042,70972676,70970805,70966056,70959391	Gene ID= ENSG00000114861.18 TPM= 6.22 Transcript Type= protein_coding
chr3	70959204	71583753	70959204	71583753	-	ENST00000493089.5@FOXP1	ENST00000493089.5	protein_coding	71583571,71581549,71493426,71359150,71299820,71198202,71112536,71053636,71052537,71046942,71041328,71015549,71000972,70987994,70977828,70977643,70976941,70972555,70970736,70965890,70959204	71583753,71581697,71493555,71359244,71299880,71198392,71112637,71053773,71052626,71047095,71041532,71015653,71001059,70988077,70978029,70977719,70977042,70972676,70970805,70966056,70959391	Gene ID= ENSG00000114861.18 TPM= 12.06 Transcript Type= protein_coding
chr3	71087285	71093284	71087285	71093284	+	transcript4080.chr3.nnic@NA	transcript4080.chr3.nnic	NA	71087285	71093284	Gene ID= novel_gene_chr3_4081 TPM= 3.5 Transcript Type= NA
chr3	71230699	71232894	71230699	71232894	+	transcript4078.chr3.nnic@NA	transcript4078.chr3.nnic	NA	71230699	71232894	Gene ID= novel_gene_chr3_4079 TPM= 7.01 Transcript Type= NA
chr3	71316662	71319643	71316662	71319643	-	transcript4084.chr3.nnic@NA	transcript4084.chr3.nnic	NA	71316662	71319643	Gene ID= novel_gene_chr3_4085 TPM= 2.34 Transcript Type= NA
chr3	71582378	71584062	71582378	71584062	+	transcript4082.chr3.nnic@NA	transcript4082.chr3.nnic	NA	71582378	71584062	Gene ID= novel_gene_chr3_4083 TPM= 4.67 Transcript Type= NA
chr3	71681856	71725442	71681856	71725442	-	transcript4099.chr3.nic@EIF4E3	transcript4099.chr3.nic	protein_coding	71725192,71710412,71693875,71690010,71681856	71725442,71710484,71693941,71690165,71684728	Gene ID= ENSG00000163412.12 TPM= 7.01 Transcript Type= NA
chr3	71754050	71756496	71754050	71756496	+	ENST00000304411.2@GPR27	ENST00000304411.2	protein_coding	71754050	71756496	Gene ID= ENSG00000170837.2 TPM= 9.34 Transcript Type= protein_coding
chr3	72749279	72848480	72749279	72848480	-	ENST00000325599.12@SHQ1	ENST00000325599.12	protein_coding	72848198,72844359,72842280,72841045,72832369,72824424,72817230,72815350,72812671,72792916,72749279	72848480,72844423,72842402,72841199,72832481,72824551,72817384,72815403,72812794,72793036,72750836	Gene ID= ENSG00000144736.13 TPM= 23.35 Transcript Type= protein_coding
chr3	72888060	73067193	72888060	73067193	+	transcript4125.chr3.nic@PPP4R2	transcript4125.chr3.nic	protein_coding	72888060,72908367,72922204,72955098,72957229,72967547,72998077,73047186,73059037,73061023,73063673,73064003,73064852,73065397	72888508,72908559,72922335,72955349,72957352,72967719,72998158,73047356,73059130,73061060,73063747,73064146,73065141,73067193	Gene ID= ENSG00000163605.14 TPM= 4.67 Transcript Type= NA
chr3	72996785	73069199	72996785	73069199	+	ENST00000356692.9@PPP4R2	ENST00000356692.9	protein_coding	72996785,72998077,73047186,73059037,73061023,73063673,73064003,73064852,73065397	72997071,72998158,73047356,73059130,73061060,73063747,73064146,73065141,73069199	Gene ID= ENSG00000163605.14 TPM= 39.11 Transcript Type= protein_coding
chr3	72996790	73069198	72996790	73069198	+	transcript4136.chr3.nic@PPP4R2	transcript4136.chr3.nic	protein_coding	72996790,72998077,73047186,73059037,73061023,73063673,73064003,73064852	72997071,72998158,73047356,73059130,73061060,73063747,73064146,73069198	Gene ID= ENSG00000163605.14 TPM= 4.67 Transcript Type= NA
chr3	73382433	73624940	73382433	73624940	-	ENST00000263666.8@PDZRN3	ENST00000263666.8	protein_coding	73624103,73608598,73602354,73404148,73400922,73391018,73389816,73387968,73385669,73382433	73624940,73608684,73602461,73404395,73401009,73391116,73389878,73388069,73385785,73384930	Gene ID= ENSG00000121440.14 TPM= 18.1 Transcript Type= protein_coding
chr3	73382433	73624945	73382433	73624945	-	transcript4153.chr3.nnic@PDZRN3	transcript4153.chr3.nnic	protein_coding	73624103,73602354,73404148,73400922,73391018,73389816,73387968,73385669,73382433	73624945,73602461,73404395,73401009,73391116,73389878,73388069,73385785,73384930	Gene ID= ENSG00000121440.14 TPM= 8.76 Transcript Type= NA
chr3	74262568	74614706	74262568	74614706	-	transcript4156.chr3.nnic@CNTN3	transcript4156.chr3.nnic	protein_coding	74614391,74521058,74499659,74486456,74424845,74371196,74369889,74369189,74365566,74364467,74361890,74336531,74334735,74302690,74301647,74301398,74299868,74297957,74295121,74285305,74267266,74266481,74262568	74614706,74521192,74499785,74486631,74424940,74371399,74369991,74369373,74365702,74364596,74362040,74336658,74334910,74302807,74301805,74301547,74299938,74298191,74295236,74285491,74267378,74266649,74264501	Gene ID= ENSG00000113805.8 TPM= 4.67 Transcript Type= NA
chr3	75729961	75785553	75729961	75785553	-	ENST00000477374.5@ZNF717	ENST00000477374.5	protein_coding	75785384,75783306,75741610,75741276,75732060,75729961	75785553,75783364,75741736,75741368,75732121,75730618	Gene ID= ENSG00000227124.8 TPM= 2.34 Transcript Type= protein_coding
chr3	77477414	77647510	77477414	77647510	+	transcript4179.chr3.nic@ROBO2	transcript4179.chr3.nic	protein_coding	77477414,77481099,77493244,77522775,77527403,77546338,77550818,77557944,77562651,77563167,77564954,77568313,77574499,77577490,77579947,77588751,77595142,77596623,77602210,77607798,77617513,77622227,77632474,77634870,77644704,77646054	77477571,77481219,77493382,77522902,77527414,77546462,77550989,77558149,77562732,77563329,77565120,77568434,77574730,77577614,77580118,77588933,77595184,77596750,77602491,77607954,77617773,77622432,77632656,77635043,77644904,77647510	Gene ID= ENSG00000185008.17 TPM= 4.67 Transcript Type= NA
chr3	78597240	79019459	78597240	79019459	-	ENST00000618833.4@ROBO1	ENST00000618833.4	protein_coding	79018407,78938601,78746743,78717763,78717275,78714397,78688648,78685746,78670096,78668484,78668134,78667883,78661993,78661030,78659686,78657098,78651732,78646148,78639744,78635773,78633935,78631161,78627321,78617635,78614648,78606733,78600113,78597240	79019459,78938927,78746900,78717883,78717413,78714524,78688781,78685917,78670301,78668565,78668302,78668049,78662114,78661261,78659807,78657269,78651929,78646190,78639898,78636108,78634042,78631305,78627569,78618041,78614800,78607041,78600309,78598927	Gene ID= ENSG00000169855.19 TPM= 8.17 Transcript Type= protein_coding
chr3	78597246	79019459	78597246	79019459	-	ENST00000436010.6@ROBO1	ENST00000436010.6	protein_coding	79018407,78938601,78746743,78717763,78717275,78714397,78688648,78685746,78670096,78668484,78668134,78667883,78661993,78661026,78659686,78657098,78651732,78647629,78646148,78639744,78635773,78633931,78631161,78627321,78617635,78614648,78606733,78600113,78597246	79019459,78938927,78746900,78717883,78717413,78714524,78688772,78685917,78670301,78668565,78668302,78668049,78662114,78661261,78659800,78657269,78651929,78647655,78646190,78639898,78636108,78634042,78631301,78627569,78618041,78614800,78607041,78600309,78598927	Gene ID= ENSG00000169855.19 TPM= 2.34 Transcript Type= protein_coding
chr3	81489699	81762161	81489699	81762161	-	ENST00000429644.6@GBE1	ENST00000429644.6	protein_coding	81761375,81705444,81670838,81649796,81648856,81646392,81642781,81593908,81591037,81586092,81581165,81577925,81536911,81535195,81499110,81489699	81762161,81705613,81670953,81649921,81648991,81646482,81642990,81594023,81591164,81586190,81581275,81578096,81537095,81535325,81499227,81490463	Gene ID= ENSG00000114480.12 TPM= 87.57 Transcript Type= protein_coding
chr3	86937969	86991107	86937969	86991107	-	ENST00000398399.6@VGLL3	ENST00000398399.6	protein_coding	86990618,86978526,86968590,86937969	86991107,86978802,86969123,86947067	Gene ID= ENSG00000206538.8 TPM= 30.36 Transcript Type= protein_coding
chr3	87227323	87254224	87227323	87254224	+	transcript4202.chr3.nic@CHMP2B	transcript4202.chr3.nic	protein_coding	87227323,87240323,87240699,87245714,87249875,87253404,87253712	87227556,87240453,87240790,87245908,87249977,87253510,87254224	Gene ID= ENSG00000083937.8 TPM= 2.34 Transcript Type= NA
chr3	87227271	87255548	87227271	87255548	+	ENST00000471660.5@CHMP2B	ENST00000471660.5	protein_coding	87227271,87245714,87249875,87253404,87253712	87227556,87245908,87249977,87253510,87255548	Gene ID= ENSG00000083937.8 TPM= 2.34 Transcript Type= protein_coding
chr3	87227285	87255499	87227285	87255499	+	ENST00000263780.8@CHMP2B	ENST00000263780.8	protein_coding	87227285,87240699,87245714,87249875,87253404,87253712	87227556,87240790,87245908,87249977,87253510,87255499	Gene ID= ENSG00000083937.8 TPM= 40.87 Transcript Type= protein_coding
chr3	88055414	88059068	88055414	88059068	-	ENST00000482016.5@CGGBP1	ENST00000482016.5	protein_coding	88058815,88058019,88057191,88055414	88059068,88058223,88057292,88055999	Gene ID= ENSG00000163320.10 TPM= 4.67 Transcript Type= protein_coding
chr3	88051944	88059048	88051944	88059048	-	ENST00000309534.10@CGGBP1	ENST00000309534.10	protein_coding	88058815,88058019,88051944	88059048,88058223,88055999	Gene ID= ENSG00000163320.10 TPM= 17.51 Transcript Type= protein_coding
chr3	88052012	88058999	88052012	88058999	-	transcript4220.chr3.nic@CGGBP1	transcript4220.chr3.nic	protein_coding	88058019,88052012	88058999,88055999	Gene ID= ENSG00000163320.10 TPM= 2.34 Transcript Type= NA
chr3	88055426	88058999	88055426	88058999	-	transcript4223.chr3.nic@CGGBP1	transcript4223.chr3.nic	protein_coding	88058019,88055426	88058999,88055999	Gene ID= ENSG00000163320.10 TPM= 4.67 Transcript Type= NA
chr3	88055411	88058998	88055411	88058998	-	transcript4227.chr3.nnic@NA	transcript4227.chr3.nnic	NA	88055411	88058998	Gene ID= novel_gene_chr3_4228 TPM= 4.67 Transcript Type= NA
chr3	88059274	88144665	88059274	88144665	+	ENST00000636215.1@ZNF654	ENST00000636215.1	protein_coding	88059274,88086257,88113115,88126134,88128809,88129687,88135061,88138705,88141645	88059505,88086402,88113196,88126269,88129011,88129826,88135202,88141048,88144665	Gene ID= ENSG00000175105.6 TPM= 3.5 Transcript Type= protein_coding
chr3	88161956	88163922	88161956	88163922	-	transcript4243.chr3.nnic@NA	transcript4243.chr3.nnic	NA	88161956	88163922	Gene ID= novel_gene_chr3_4244 TPM= 2.34 Transcript Type= NA
chr3	93980141	94055279	93980141	94055279	+	transcript4272.chr3.nnic@ARL13B	transcript4272.chr3.nnic	protein_coding	93980141,93995874,93997247,94003659,94035331,94036552,94039880,94043015,94049406,94050824,94053187	93980482,93995944,93997301,94003908,94035436,94036754,94039988,94043240,94049522,94050892,94055279	Gene ID= ENSG00000169379.15 TPM= 2.34 Transcript Type= NA
chr3	93980141	94055279	93980141	94055279	+	transcript4274.chr3.nic@ARL13B	transcript4274.chr3.nic	protein_coding	93980141,93995874,94035331,94036552,94039880,94043015,94049406,94050824,94053187	93980482,93995944,94035436,94036754,94039988,94043240,94049522,94050892,94055279	Gene ID= ENSG00000169379.15 TPM= 2.34 Transcript Type= NA
chr3	93980139	94055668	93980139	94055668	+	ENST00000535334.5@ARL13B	ENST00000535334.5	protein_coding	93980139,94003659,94035331,94036552,94039880,94043015,94049406,94050824,94053187	93980482,94003908,94035436,94036754,94039988,94043240,94049522,94050892,94055668	Gene ID= ENSG00000169379.15 TPM= 1.17 Transcript Type= protein_coding
chr3	93980190	94055279	93980190	94055279	+	ENST00000335438.7@ARL13B	ENST00000335438.7	protein_coding	93980190,93995874,93996563,94003659,94035331,94036552,94039880,94043015,94049406,94050824,94053187	93980482,93995944,93996684,94003908,94035436,94036754,94039988,94043240,94049522,94050892,94055279	Gene ID= ENSG00000169379.15 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr3	94014369	94028610	94014369	94028610	-	ENST00000315099.2@STX19	ENST00000315099.2	protein_coding	94028367,94014369	94028610,94015282	Gene ID= ENSG00000178750.2 TPM= 1.17 Transcript Type= protein_coding
chr3	94057922	94062987	94057922	94062987	-	ENST00000314636.2@DHFR2	ENST00000314636.2	protein_coding	94062746,94057922	94062987,94061606	Gene ID= ENSG00000178700.7 TPM= 1.75 Transcript Type= protein_coding
chr3	94057924	94063223	94057924	94063223	-	ENST00000394221.2@DHFR2	ENST00000394221.2	protein_coding	94062869,94057924	94063223,94061606	Gene ID= ENSG00000178700.7 TPM= 4.09 Transcript Type= protein_coding
chr3	97764528	97801242	97764528	97801242	+	ENST00000463745.5@ARL6	ENST00000463745.5	protein_coding	97764528,97768081,97780159,97780615,97784955,97787990,97791771,97798024	97764977,97768230,97780220,97780683,97785049,97788119,97791826,97801242	Gene ID= ENSG00000113966.9 TPM= 1.17 Transcript Type= protein_coding
chr3	97764541	97800677	97764541	97800677	+	transcript4301.chr3.nic@ARL6	transcript4301.chr3.nic	protein_coding	97764541,97768081,97780159,97780615,97784955,97787990,97798024	97764977,97768230,97780220,97780683,97785049,97788119,97800677	Gene ID= ENSG00000113966.9 TPM= 4.67 Transcript Type= NA
chr3	97822012	97873639	97822012	97873639	+	transcript4318.chr3.nic@CRYBG3	transcript4318.chr3.nic	protein_coding	97822012,97843195,97864217,97871842	97822355,97843261,97864647,97873639	Gene ID= ENSG00000080200.9 TPM= 2.34 Transcript Type= NA
chr3	97822040	97944963	97822040	97944963	+	ENST00000389622.6@CRYBG3	ENST00000389622.6	protein_coding	97822040,97843195,97864217,97871842,97879704,97879985,97881072,97886631,97888341,97889355,97892860,97895959,97898883,97899137,97900453,97912167,97915610,97933694,97936785,97941148,97942284,97943226	97822355,97843261,97864647,97878037,97879748,97880100,97881219,97886767,97888455,97889390,97892993,97896085,97899025,97899263,97900485,97912276,97915736,97933833,97936908,97941306,97942443,97944963	Gene ID= ENSG00000080200.9 TPM= 11.68 Transcript Type= protein_coding
chr3	97941818	97972457	97941818	97972457	-	ENST00000333396.11@RIOX2	ENST00000333396.11	protein_coding	97971914,97967162,97961589,97959051,97954392,97950786,97949844,97947361,97945798,97941818	97972457,97967632,97961708,97959179,97954495,97950888,97950015,97947449,97945887,97945342	Gene ID= ENSG00000170854.17 TPM= 1.17 Transcript Type= protein_coding
chr3	97944351	97972451	97944351	97972451	-	ENST00000394198.6@RIOX2	ENST00000394198.6	protein_coding	97972381,97967162,97961589,97959051,97954392,97950786,97949844,97947361,97945798,97944351	97972451,97967632,97961708,97959179,97954495,97950888,97950015,97947449,97945887,97945342	Gene ID= ENSG00000170854.17 TPM= 3.5 Transcript Type= protein_coding
chr3	97945338	97972441	97945338	97972441	-	transcript4317.chr3.nic@RIOX2	transcript4317.chr3.nic	protein_coding	97972381,97967162,97961589,97959051,97954392,97950786,97949844,97947361,97945338	97972441,97967632,97961708,97959179,97954495,97950888,97950015,97947449,97945887	Gene ID= ENSG00000170854.17 TPM= 5.84 Transcript Type= NA
chr3	98515483	98523018	98515483	98523018	-	ENST00000394181.6@CLDND1	ENST00000394181.6	protein_coding	98522849,98521653,98521133,98518885,98517052,98515483	98523018,98521696,98521442,98518995,98517189,98516879	Gene ID= ENSG00000080822.16 TPM= 7.79 Transcript Type= protein_coding
chr3	98515480	98523066	98515480	98523066	-	ENST00000394180.6@CLDND1	ENST00000394180.6	protein_coding	98522849,98521653,98521133,98518885,98517052,98515480	98523066,98521703,98521442,98518995,98517189,98516879	Gene ID= ENSG00000080822.16 TPM= 4.29 Transcript Type= protein_coding
chr3	98500784	98522917	98500784	98522917	-	transcript4325.chr3.nic@CLDND1	transcript4325.chr3.nic	protein_coding	98522849,98521133,98518885,98517052,98500784	98522917,98521442,98518995,98517189,98501520	Gene ID= ENSG00000080822.16 TPM= 5.84 Transcript Type= NA
chr3	98506474	98522931	98506474	98522931	-	transcript4327.chr3.nnic@CLDND1	transcript4327.chr3.nnic	protein_coding	98522849,98521133,98518885,98517052,98506474	98522931,98521442,98518995,98517189,98506747	Gene ID= ENSG00000080822.16 TPM= 5.84 Transcript Type= NA
chr3	98515473	98523043	98515473	98523043	-	ENST00000341181.10@CLDND1	ENST00000341181.10	protein_coding	98522849,98521133,98518885,98517052,98515473	98523043,98521442,98518995,98517189,98516879	Gene ID= ENSG00000080822.16 TPM= 59.16 Transcript Type= protein_coding
chr3	98531977	98535177	98531977	98535177	+	transcript4335.chr3.nnic@NA	transcript4335.chr3.nnic	NA	98531977	98535177	Gene ID= novel_gene_chr3_4336 TPM= 2.34 Transcript Type= NA
chr3	98579442	98593723	98579442	98593723	-	ENST00000264193.2@CPOX	ENST00000264193.2	protein_coding	98592949,98591012,98590632,98588713,98585441,98581407,98579442	98593723,98591155,98590742,98588854,98585659,98581511,98580770	Gene ID= ENSG00000080819.6 TPM= 24.52 Transcript Type= protein_coding
chr3	98732266	98795254	98732266	98795254	+	ENST00000469105.5@ST3GAL6	ENST00000469105.5	protein_coding	98732266,98768430,98770879,98771121,98772813,98773920,98784945,98788036,98788326,98791841,98793675	98732532,98768529,98770956,98771190,98772916,98773983,98785040,98788222,98788463,98791993,98795254	Gene ID= ENSG00000064225.12 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr3	98732439	98795254	98732439	98795254	+	transcript4347.chr3.nic@ST3GAL6	transcript4347.chr3.nic	protein_coding	98732439,98756369,98768430,98770879,98772813,98773920,98784945,98788036,98788326,98791841,98793675	98732532,98756540,98768529,98770956,98772916,98773983,98785040,98788222,98788463,98791993,98795254	Gene ID= ENSG00000064225.12 TPM= 3.5 Transcript Type= NA
chr3	98732255	98794362	98732255	98794362	+	ENST00000483910.5@ST3GAL6	ENST00000483910.5	protein_coding	98732255,98768430,98770879,98772813,98773920,98784945,98788036,98788326,98791841,98793675	98732532,98768529,98770956,98772916,98773983,98785040,98788222,98788463,98791993,98794362	Gene ID= ENSG00000064225.12 TPM= 1.17 Transcript Type= protein_coding
chr3	98732701	98793944	98732701	98793944	+	transcript4352.chr3.nnic@ST3GAL6	transcript4352.chr3.nnic	protein_coding	98732701,98768430,98770879,98772813,98773920,98784945,98788036,98788326,98791841,98793675	98733314,98768529,98770956,98772916,98773983,98785040,98788222,98788463,98791993,98793944	Gene ID= ENSG00000064225.12 TPM= 3.5 Transcript Type= NA
chr3	98732704	98795845	98732704	98795845	+	ENST00000613264.4@ST3GAL6	ENST00000613264.4	protein_coding	98732704,98768430,98770879,98772813,98773920,98784945,98788036,98788326,98791841,98793675	98733011,98768529,98770956,98772916,98773983,98785040,98788222,98788463,98791993,98795845	Gene ID= ENSG00000064225.12 TPM= 2.34 Transcript Type= protein_coding
chr3	98783094	98785446	98783094	98785446	-	transcript4368.chr3.nnic@NA	transcript4368.chr3.nnic	NA	98783094	98785446	Gene ID= novel_gene_chr3_4369 TPM= 2.34 Transcript Type= NA
chr3	98819213	98901713	98819213	98901713	-	transcript4382.chr3.nic@DCBLD2	transcript4382.chr3.nic	protein_coding	98901122,98881540,98849461,98825315,98822669,98822228,98820248,98819213	98901713,98881767,98849598,98825366,98822741,98822361,98820288,98819417	Gene ID= ENSG00000057019.15 TPM= 3.5 Transcript Type= NA
chr3	98820763	98901713	98820763	98901713	-	transcript4383.chr3.nic@DCBLD2	transcript4383.chr3.nic	protein_coding	98901122,98881540,98849461,98825315,98820763	98901713,98881767,98849598,98825366,98822741	Gene ID= ENSG00000057019.15 TPM= 2.34 Transcript Type= NA
chr3	98795941	98901689	98795941	98901689	-	ENST00000326840.10@DCBLD2	ENST00000326840.10	protein_coding	98901122,98881540,98849461,98825315,98822669,98822228,98820248,98819202,98817769,98812332,98811468,98811194,98808081,98801600,98800579,98795941	98901689,98881767,98849598,98825366,98822741,98822361,98820288,98819417,98817893,98812482,98811554,98811319,98808174,98801649,98800716,98799841	Gene ID= ENSG00000057019.15 TPM= 37.36 Transcript Type= protein_coding
chr3	99638576	99796154	99638576	99796154	+	transcript4388.chr3.nnic@COL8A1	transcript4388.chr3.nnic	protein_coding	99638576,99675660,99691399,99744897,99790680,99794230	99638664,99675721,99691568,99745021,99791010,99796154	Gene ID= ENSG00000144810.15 TPM= 16.93 Transcript Type= NA
chr3	99638475	99799226	99638475	99799226	+	ENST00000261037.7@COL8A1	ENST00000261037.7	protein_coding	99638475,99675660,99744897,99790680,99794230	99638664,99675721,99745021,99791010,99799226	Gene ID= ENSG00000144810.15 TPM= 60.71 Transcript Type= protein_coding
chr3	99847923	99876203	99847923	99876203	-	ENST00000383694.3@FILIP1L	ENST00000383694.3	protein_coding	99876072,99847923	99876203,99851070	Gene ID= ENSG00000168386.18 TPM= 99.25 Transcript Type= protein_coding
chr3	100261012	100325238	100261012	100325238	+	ENST00000394144.8@TBC1D23	ENST00000394144.8	protein_coding	100261012,100279649,100281742,100283607,100290578,100295087,100295302,100296172,100297923,100299239,100302067,100304846,100306437,100310403,100311833,100316099,100319069,100320777,100323587	100261071,100279760,100281847,100283811,100290701,100295211,100295348,100296275,100298045,100299331,100302237,100304888,100306543,100310542,100311877,100316187,100319204,100320971,100325238	Gene ID= ENSG00000036054.12 TPM= 65.97 Transcript Type= protein_coding
chr3	100261001	100325251	100261001	100325251	+	ENST00000344949.9@TBC1D23	ENST00000344949.9	protein_coding	100261001,100279649,100281742,100283607,100290578,100295087,100295302,100296172,100297923,100299239,100302067,100304846,100306437,100310403,100316099,100319069,100320777,100323587	100261071,100279760,100281847,100283811,100290701,100295211,100295348,100296275,100298045,100299331,100302237,100304888,100306543,100310542,100316187,100319204,100320971,100325251	Gene ID= ENSG00000036054.12 TPM= 13.43 Transcript Type= protein_coding
chr3	100334701	100361635	100334701	100361635	+	ENST00000394140.8@NIT2	ENST00000394140.8	protein_coding	100334701,100339087,100339815,100341073,100345585,100346181,100348803,100352404,100354772,100355177	100334798,100339205,100339935,100341161,100345678,100346255,100348881,100352502,100354827,100361635	Gene ID= ENSG00000114021.11 TPM= 21.02 Transcript Type= protein_coding
chr3	100334757	100355351	100334757	100355351	+	transcript4443.chr3.nnic@NIT2	transcript4443.chr3.nnic	protein_coding	100334757,100339087,100339815,100341073,100345585,100346181,100348803,100352404,100354772,100355177	100335142,100339205,100339935,100341161,100345678,100346255,100348881,100352502,100354827,100355351	Gene ID= ENSG00000114021.11 TPM= 2.34 Transcript Type= NA
chr3	100334739	100355351	100334739	100355351	+	ENST00000465368.5@NIT2	ENST00000465368.5	protein_coding	100334739,100339087,100339815,100341073,100345585,100348803,100352404,100354772,100355177	100334798,100339205,100339935,100341161,100346255,100348881,100352502,100354827,100355351	Gene ID= ENSG00000114021.11 TPM= 5.84 Transcript Type= retained_intron
chr3	100363431	100401398	100363431	100401398	-	ENST00000284320.5@TOMM70	ENST00000284320.5	protein_coding	100400626,100386805,100386218,100384479,100381615,100377705,100375018,100373538,100372606,100369038,100368044,100363431	100401398,100386978,100386344,100384588,100381763,100377912,100375152,100373645,100372722,100369135,100368166,100365717	Gene ID= ENSG00000154174.7 TPM= 75.89 Transcript Type= protein_coding
chr3	100492597	100577444	100492597	100577444	+	transcript4450.chr3.nnic@TMEM45A	transcript4450.chr3.nnic	protein_coding	100492597,100519462,100555209,100556760,100558405,100568822,100576925	100492928,100519608,100555401,100556972,100558589,100568967,100577444	Gene ID= ENSG00000181458.10 TPM= 7.01 Transcript Type= NA
chr3	100492619	100577444	100492619	100577444	+	ENST00000323523.8@TMEM45A	ENST00000323523.8	protein_coding	100492619,100555209,100556760,100558405,100568822,100576925	100492928,100555401,100556972,100558589,100568967,100577444	Gene ID= ENSG00000181458.10 TPM= 19.85 Transcript Type= protein_coding
chr3	100709425	100748966	100709425	100748966	+	ENST00000240851.8@TFG	ENST00000240851.8	protein_coding	100709425,100713643,100719975,100728712,100732508,100736576,100744833,100748149	100709721,100713869,100720058,100728858,100732672,100736716,100744931,100748966	Gene ID= ENSG00000114354.13 TPM= 103.92 Transcript Type= protein_coding
chr3	100709505	100748964	100709505	100748964	+	transcript4461.chr3.nnic@TFG	transcript4461.chr3.nnic	protein_coding	100709505,100713643,100719975,100728712,100732508,100736576,100744833,100748149	100709588,100713869,100720058,100728858,100732672,100736716,100744931,100748964	Gene ID= ENSG00000114354.13 TPM= 5.84 Transcript Type= NA
chr3	100709361	100748942	100709361	100748942	+	ENST00000418917.6@TFG	ENST00000418917.6	protein_coding	100709361,100713643,100719975,100728712,100732508,100736576,100744833,100748149	100709431,100713869,100720058,100728858,100732672,100736704,100744931,100748942	Gene ID= ENSG00000114354.13 TPM= 1.17 Transcript Type= protein_coding
chr3	100749335	100993507	100749335	100993507	-	transcript4466.chr3.nic@ABI3BP	transcript4466.chr3.nic	protein_coding	100993306,100926302,100902618,100898762,100886142,100885536,100876512,100875508,100874841,100866879,100864833,100862311,100851875,100850660,100850045,100848801,100847602,100846372,100808161,100804792,100796409,100794923,100792691,100789454,100787728,100780132,100778284,100775207,100774605,100770743,100765841,100754612,100753819,100752787,100751552,100749335	100993507,100926481,100902686,100898894,100886323,100885588,100876560,100875579,100874933,100866956,100864907,100862385,100851940,100850734,100850119,100848875,100847673,100846446,100808235,100804866,100796468,100795003,100792768,100789516,100787802,100780209,100778376,100775335,100774673,100770952,100765949,100754691,100753848,100752948,100751674,100750610	Gene ID= ENSG00000154175.16 TPM= 10.31 Transcript Type= NA
chr3	100749335	100993507	100749335	100993507	-	transcript4469.chr3.nic@ABI3BP	transcript4469.chr3.nic	protein_coding	100993306,100926302,100902618,100898762,100886142,100885536,100876512,100875508,100874841,100866879,100864833,100862311,100851875,100850660,100850045,100848801,100847602,100846372,100808161,100804792,100794923,100792691,100789454,100787728,100780132,100778284,100775207,100774605,100770743,100765841,100754612,100753819,100752787,100751552,100749335	100993507,100926481,100902686,100898894,100886323,100885588,100876560,100875579,100874933,100866956,100864907,100862385,100851940,100850734,100850119,100848875,100847673,100846446,100808235,100804866,100795003,100792768,100789516,100787802,100780209,100778376,100775335,100774673,100770952,100765949,100754691,100753848,100752948,100751674,100750610	Gene ID= ENSG00000154175.16 TPM= 5.64 Transcript Type= NA
chr3	100749335	100993507	100749335	100993507	-	transcript4470.chr3.nic@ABI3BP	transcript4470.chr3.nic	protein_coding	100993306,100926302,100902618,100898762,100886142,100885536,100876512,100875508,100874841,100866879,100864833,100862311,100851875,100850660,100850045,100848801,100847602,100846372,100808161,100804792,100796409,100794923,100789454,100787728,100780132,100778284,100775207,100774605,100770743,100765841,100754612,100753819,100752787,100751552,100749335	100993507,100926481,100902686,100898894,100886323,100885588,100876560,100875579,100874933,100866956,100864907,100862385,100851940,100850734,100850119,100848875,100847673,100846446,100808235,100804866,100796468,100795003,100789516,100787802,100780209,100778376,100775335,100774673,100770952,100765949,100754691,100753848,100752948,100751674,100750610	Gene ID= ENSG00000154175.16 TPM= 9.73 Transcript Type= NA
chr3	100749335	100993515	100749335	100993515	-	ENST00000284322.9@ABI3BP	ENST00000284322.9	protein_coding	100993306,100926302,100902618,100898762,100886142,100885536,100876512,100875508,100874841,100866879,100864833,100862311,100851875,100850660,100850045,100848801,100847602,100846372,100808161,100804792,100796409,100794923,100792691,100789454,100780132,100778284,100775207,100774605,100770743,100765841,100754612,100753819,100752787,100751552,100749335	100993515,100926481,100902686,100898894,100886323,100885588,100876560,100875579,100874933,100866956,100864907,100862385,100851940,100850734,100850119,100848875,100847673,100846446,100808235,100804866,100796468,100795003,100792768,100789516,100780209,100778376,100775335,100774673,100770952,100765949,100754691,100753848,100752948,100751674,100750610	Gene ID= ENSG00000154175.16 TPM= 3.5 Transcript Type= protein_coding
chr3	100749335	100993507	100749335	100993507	-	transcript4473.chr3.nic@ABI3BP	transcript4473.chr3.nic	protein_coding	100993306,100926302,100902618,100898762,100886142,100885536,100876512,100875508,100874841,100866879,100864833,100862311,100851875,100850660,100850045,100848801,100847602,100846372,100808161,100804792,100796409,100794923,100789454,100780132,100778284,100775207,100774605,100770743,100765841,100754612,100753819,100752787,100751552,100749335	100993507,100926481,100902686,100898894,100886323,100885588,100876560,100875579,100874933,100866956,100864907,100862385,100851940,100850734,100850119,100848875,100847673,100846446,100808235,100804866,100796468,100795003,100789516,100780209,100778376,100775335,100774673,100770952,100765949,100754691,100753848,100752948,100751674,100750610	Gene ID= ENSG00000154175.16 TPM= 4.67 Transcript Type= NA
chr3	101324273	101513205	101324273	101513205	-	ENST00000394094.6@SENP7	ENST00000394094.6	protein_coding	101513091,101501070,101493873,101458955,101417593,101372008,101367830,101366430,101364834,101361715,101351618,101347872,101343686,101341646,101340095,101337509,101332770,101331985,101330334,101328646,101328478,101327666,101324273	101513205,101501119,101493968,101459052,101417790,101372126,101368011,101366769,101364991,101361861,101351651,101348051,101343954,101341779,101340211,101337631,101332862,101332109,101330386,101328689,101328546,101327816,101326080	Gene ID= ENSG00000138468.15 TPM= 5.84 Transcript Type= protein_coding
chr3	101561862	101566446	101561862	101566446	+	ENST00000309922.6@TRMT10C	ENST00000309922.6	protein_coding	101561862,101564770	101562003,101566446	Gene ID= ENSG00000174173.6 TPM= 5.84 Transcript Type= protein_coding
chr3	101574172	101594437	101574172	101594437	+	transcript4512.chr3.nnic@PCNP	transcript4512.chr3.nnic	protein_coding	101574172,101579790,101585437,101592627	101574279,101580004,101585511,101594437	Gene ID= ENSG00000081154.11 TPM= 9.5 Transcript Type= NA
chr3	101574095	101594437	101574095	101594437	+	ENST00000265260.7@PCNP	ENST00000265260.7	protein_coding	101574095,101579790,101585437,101590215,101592627	101574279,101580004,101585511,101590270,101594437	Gene ID= ENSG00000081154.11 TPM= 190.48 Transcript Type= protein_coding
chr3	101574190	101594407	101574190	101594407	+	ENST00000460231.5@PCNP	ENST00000460231.5	protein_coding	101574190,101579842,101585437,101590215,101592627	101574279,101580004,101585511,101590270,101594407	Gene ID= ENSG00000081154.11 TPM= 79.4 Transcript Type= nonsense_mediated_decay
chr3	101574194	101594437	101574194	101594437	+	ENST00000469941.5@PCNP	ENST00000469941.5	protein_coding	101574194,101585437,101590215,101592627	101574279,101585511,101590270,101594437	Gene ID= ENSG00000081154.11 TPM= 34.02 Transcript Type= protein_coding
chr3	101648889	101677495	101648889	101677495	-	ENST00000312938.4@ZBTB11	ENST00000312938.4	protein_coding	101676605,101671978,101671130,101664964,101664538,101659783,101656104,101654704,101652780,101652496,101648889	101677495,101672213,101671361,101665808,101664714,101660028,101656248,101654821,101652938,101652671,101651683	Gene ID= ENSG00000066422.4 TPM= 1.17 Transcript Type= protein_coding
chr3	101681092	101686782	101681092	101686782	-	ENST00000394077.7@RPL24	ENST00000394077.7	protein_coding	101686672,101686482,101685818,101682771,101682429,101681092	101686782,101686557,101685928,101682907,101682492,101681215	Gene ID= ENSG00000114391.12 TPM= 187.98 Transcript Type= protein_coding
chr3	101688335	101692775	101688335	101692775	+	transcript4531.chr3.nnic@NA	transcript4531.chr3.nnic	NA	101688335	101692775	Gene ID= novel_gene_chr3_4532 TPM= 3.5 Transcript Type= NA
chr3	101723925	101770562	101723925	101770562	+	ENST00000341893.7@CEP97	ENST00000341893.7	protein_coding	101723925,101726594,101727383,101728836,101731840,101732488,101755430,101757063,101757634,101762485,101764847	101724719,101726736,101727541,101728937,101731953,101732654,101755594,101757196,101758423,101762560,101770562	Gene ID= ENSG00000182504.10 TPM= 1.17 Transcript Type= protein_coding
chr3	101779201	101822929	101779201	101822929	+	transcript4541.chr3.nnic@NXPE3	transcript4541.chr3.nnic	protein_coding	101779201,101779683,101782110,101782660,101785402,101801235,101807053,101816795,101821404	101779324,101779900,101782290,101782780,101785689,101801989,101807126,101817001,101822929	Gene ID= ENSG00000144815.15 TPM= 2.34 Transcript Type= NA
chr3	101779442	101827392	101779442	101827392	+	ENST00000491511.6@NXPE3	ENST00000491511.6	protein_coding	101779442,101782110,101782660,101785402,101801235,101807053,101816795,101821404	101779900,101782290,101782780,101785689,101801989,101807126,101817001,101827392	Gene ID= ENSG00000144815.15 TPM= 2.34 Transcript Type= protein_coding
chr3	101849514	101861022	101849514	101861022	+	ENST00000326172.9@NFKBIZ	ENST00000326172.9	protein_coding	101849514,101852085,101852738,101852886,101853091,101854578,101855062,101855395,101855733,101857073,101857292,101859318	101849917,101852224,101852768,101852989,101853863,101854683,101855208,101855458,101855902,101857183,101857459,101861022	Gene ID= ENSG00000144802.11 TPM= 48.46 Transcript Type= protein_coding
chr3	101849513	101861022	101849513	101861022	+	transcript4554.chr3.nic@NFKBIZ	transcript4554.chr3.nic	protein_coding	101849513,101852085,101852738,101852886,101853091,101854578,101855062,101855395,101855733,101857292,101859318	101849917,101852224,101852768,101852989,101853863,101854683,101855208,101855458,101855902,101857459,101861022	Gene ID= ENSG00000144802.11 TPM= 4.09 Transcript Type= NA
chr3	105366909	105576900	105366909	105576900	+	ENST00000306107.9@ALCAM	ENST00000306107.9	protein_coding	105366909,105520067,105524289,105532002,105533603,105534663,105539975,105541633,105545223,105547149,105547390,105550127,105552144,105552468,105571852,105574477	105367481,105520167,105524508,105532066,105533690,105534845,105540102,105541765,105545335,105547284,105547523,105550259,105552182,105552585,105571964,105576900	Gene ID= ENSG00000170017.12 TPM= 164.63 Transcript Type= protein_coding
chr3	105368462	105371789	105368462	105371789	-	transcript4573.chr3.nnic@NA	transcript4573.chr3.nnic	NA	105368462	105371789	Gene ID= novel_gene_chr3_4574 TPM= 2.34 Transcript Type= NA
chr3	105452102	105453023	105452102	105453023	-	transcript4571.chr3.nnic@NA	transcript4571.chr3.nnic	NA	105452102	105453023	Gene ID= novel_gene_chr3_4572 TPM= 2.34 Transcript Type= NA
chr3	105658269	105869012	105658269	105869012	-	transcript4578.chr3.nic@CBLB	transcript4578.chr3.nic	protein_coding	105868912,105867410,105853414,105776396,105751462,105745917,105740494,105737171,105734009,105720047,105703988,105702094,105693494,105685320,105681724,105681479,105678431,105670233,105658269	105869012,105867591,105853664,105776542,105751618,105746038,105740631,105737258,105734140,105720250,105704173,105702459,105693588,105685466,105681818,105681610,105678571,105670352,105659229	Gene ID= ENSG00000114423.18 TPM= 3.5 Transcript Type= NA
chr3	105655461	105869043	105655461	105869043	-	ENST00000264122.8@CBLB	ENST00000264122.8	protein_coding	105868736,105867410,105853414,105776396,105751462,105745917,105740494,105737171,105734009,105720047,105703988,105702094,105693494,105685320,105681724,105681479,105678431,105670233,105655461	105869043,105867591,105853664,105776542,105751618,105746038,105740631,105737258,105734140,105720250,105704173,105702459,105693588,105685466,105681818,105681610,105678571,105670352,105659229	Gene ID= ENSG00000114423.18 TPM= 3.5 Transcript Type= protein_coding
chr3	105671044	105675903	105671044	105675903	+	transcript4589.chr3.nnic@NA	transcript4589.chr3.nnic	NA	105671044	105675903	Gene ID= novel_gene_chr3_4590 TPM= 9.34 Transcript Type= NA
chr3	105730099	105733370	105730099	105733370	+	transcript4591.chr3.nnic@NA	transcript4591.chr3.nnic	NA	105730099	105733370	Gene ID= novel_gene_chr3_4592 TPM= 5.84 Transcript Type= NA
chr3	105998475	106196794	105998475	106196794	+	transcript4597.chr3.nnic@NA	transcript4597.chr3.nnic	NA	105998475,106002266,106042649,106178501,106193800	105998556,106002370,106042739,106178548,106196794	Gene ID= novel_gene_chr3_4598 TPM= 3.5 Transcript Type= NA
chr3	105998475	106196790	105998475	106196790	+	transcript4601.chr3.nnic@NA	transcript4601.chr3.nnic	NA	105998475,106002266,106042649,106193800	105998556,106002370,106042739,106196790	Gene ID= novel_gene_chr3_4598 TPM= 2.34 Transcript Type= NA
chr3	107240692	107248348	107240692	107248348	+	ENST00000466734.5@DUBR	ENST00000466734.5	lincRNA	107240692,107246008	107241087,107248348	Gene ID= ENSG00000243701.5 TPM= 1.17 Transcript Type= lincRNA
chr3	107243221	107245701	107243221	107245701	-	transcript4616.chr3.nnic@NA	transcript4616.chr3.nnic	NA	107243221	107245701	Gene ID= novel_gene_chr3_4617 TPM= 5.84 Transcript Type= NA
chr3	107522936	107811324	107522936	107811324	+	ENST00000415149.6@BBX	ENST00000415149.6	protein_coding	107522936,107526327,107645836,107710452,107716607,107728765,107732956,107744630,107747965,107755598,107772628,107774719,107778371,107791240,107798523,107801095,107805370	107523107,107526398,107645909,107710622,107716849,107728960,107733023,107744710,107748039,107755678,107773636,107774857,107778519,107791299,107798720,107801281,107811324	Gene ID= ENSG00000114439.18 TPM= 3.5 Transcript Type= protein_coding
chr3	107522976	107805861	107522976	107805861	+	ENST00000325805.12@BBX	ENST00000325805.12	protein_coding	107522976,107526327,107645836,107710452,107716607,107728765,107732956,107744630,107747965,107755598,107772628,107774719,107778371,107789787,107791240,107798523,107801095,107805370	107523107,107526398,107645909,107710622,107716849,107728960,107733023,107744710,107748039,107755678,107773636,107774857,107778519,107789876,107791299,107798720,107801281,107805861	Gene ID= ENSG00000114439.18 TPM= 3.5 Transcript Type= protein_coding
chr3	108043301	108091112	108043301	108091112	-	transcript4644.chr3.nnic@CD47	transcript4644.chr3.nnic	protein_coding	108090863,108079991,108071093,108060745,108059452,108058337,108057477,108043301	108091112,108080344,108071182,108060852,108059544,108058429,108057569,108047292	Gene ID= ENSG00000196776.14 TPM= 20.43 Transcript Type= NA
chr3	108043299	108091025	108043299	108091025	-	ENST00000355354.11@CD47	ENST00000355354.11	protein_coding	108090863,108079991,108071093,108060745,108059452,108058337,108057477,108051939,108043299	108091025,108080344,108071182,108060852,108059544,108058429,108057569,108051970,108047292	Gene ID= ENSG00000196776.14 TPM= 74.14 Transcript Type= protein_coding
chr3	108047081	108091014	108047081	108091014	-	ENST00000361309.5@CD47	ENST00000361309.5	protein_coding	108090863,108079991,108071093,108060745,108059452,108058337,108057477,108051939,108050578,108049619,108047081	108091014,108080344,108071182,108060852,108059544,108058429,108057569,108051970,108050602,108049651,108047292	Gene ID= ENSG00000196776.14 TPM= 15.76 Transcript Type= protein_coding
chr3	108047076	108049047	108047076	108049047	-	transcript4651.chr3.nnic@NA	transcript4651.chr3.nnic	NA	108047076	108049047	Gene ID= novel_gene_chr3_4652 TPM= 3.5 Transcript Type= NA
chr3	108160812	108222570	108160812	108222570	-	ENST00000264538.3@IFT57	ENST00000264538.3	protein_coding	108222111,108219410,108218535,108213931,108206628,108191521,108167793,108166854,108165431,108163663,108160812	108222570,108219572,108218653,108214021,108206696,108191643,108167864,108166985,108165493,108163729,108162655	Gene ID= ENSG00000114446.4 TPM= 25.69 Transcript Type= protein_coding
chr3	108589682	108694846	108589682	108694846	+	ENST00000361582.7@DZIP3	ENST00000361582.7	protein_coding	108589682,108605335,108608089,108611174,108616541,108624444,108625845,108629062,108632953,108634871,108636616,108637496,108642438,108644164,108646617,108647943,108648918,108651137,108654145,108661877,108662130,108669681,108672560,108674078,108675786,108677497,108684216,108686445,108687976,108688593,108688823,108690787,108693360	108589839,108605438,108608158,108611329,108616657,108624524,108625969,108629176,108633072,108634972,108636708,108637548,108642514,108644781,108646649,108648112,108648962,108651162,108654310,108661972,108662257,108669749,108672656,108674181,108675873,108677598,108684341,108686584,108688096,108688736,108688924,108690903,108694846	Gene ID= ENSG00000198919.12 TPM= 2.34 Transcript Type= protein_coding
chr3	108822698	108855005	108822698	108855005	+	ENST00000295756.10@TRAT1	ENST00000295756.10	protein_coding	108822698,108830670,108838934,108847068,108849166,108853620	108822934,108830780,108838967,108847129,108849254,108855005	Gene ID= ENSG00000163519.13 TPM= 1.17 Transcript Type= protein_coding
chr3	111071743	111135954	111071743	111135954	+	ENST00000485303.5@NECTIN3	ENST00000485303.5	protein_coding	111071743,111112030,111118656,111122121,111126184,111133635	111072177,111112371,111118952,111122238,111126335,111135954	Gene ID= ENSG00000177707.10 TPM= 2.34 Transcript Type= protein_coding
chr3	111195395	111201438	111195395	111201438	+	transcript4682.chr3.nnic@NA	transcript4682.chr3.nnic	NA	111195395	111201438	Gene ID= novel_gene_chr3_4683 TPM= 4.67 Transcript Type= NA
chr3	111542009	111652372	111542009	111652372	+	ENST00000352690.8@CD96	ENST00000352690.8	protein_coding	111542009,111545046,111567523,111579027,111585323,111598120,111600726,111606700,111623754,111624333,111637196,111638079,111647543,111649698	111542309,111545402,111567647,111579234,111585378,111598210,111600914,111606792,111623822,111624404,111637261,111638168,111647666,111652372	Gene ID= ENSG00000153283.12 TPM= 1.17 Transcript Type= protein_coding
chr3	111592900	111595443	111592900	111595443	-	ENST00000317012.4@ZBED2	ENST00000317012.4	protein_coding	111595300,111592900	111595443,111595066	Gene ID= ENSG00000177494.5 TPM= 10.51 Transcript Type= protein_coding
chr3	111732461	111778458	111732461	111778458	+	ENST00000474484.1@PLCXD2	ENST00000474484.1	protein_coding	111732461,111778268	111732703,111778458	Gene ID= ENSG00000240891.7 TPM= 3.5 Transcript Type= processed_transcript
chr3	111732479	111976289	111732479	111976289	+	transcript4691.chr3.nic@PHLDB2	transcript4691.chr3.nic	protein_coding	111732479,111845821,111884064,111913319,111919072,111920282,111932269,111939475,111940535,111945268,111948932,111952572,111953930,111962108,111966613,111967678,111969690,111973732,111974423	111732703,111845935,111885412,111913702,111919215,111920419,111932397,111939630,111940645,111945357,111949075,111952712,111954029,111962312,111966703,111967824,111969909,111973817,111976289	Gene ID= ENSG00000144824.20 TPM= 5.06 Transcript Type= NA
chr3	111859180	111976517	111859180	111976517	+	ENST00000431670.6@PHLDB2	ENST00000431670.6	protein_coding	111859180,111884064,111913319,111919072,111920282,111932269,111939475,111940535,111945268,111948932,111952572,111953930,111962108,111966613,111967678,111969690,111973732,111974423	111859576,111885412,111913702,111919215,111920419,111932397,111939630,111940645,111945357,111949075,111952712,111954029,111962312,111966703,111967824,111969909,111973817,111976517	Gene ID= ENSG00000144824.20 TPM= 1.55 Transcript Type= protein_coding
chr3	111859716	111976289	111859716	111976289	+	transcript4701.chr3.nnic@PHLDB2	transcript4701.chr3.nnic	protein_coding	111859716,111884064,111913319,111919072,111920282,111932269,111939475,111940535,111945268,111952572,111953930,111962108,111966613,111967678,111969690,111973732,111974423	111859878,111885412,111913702,111919215,111920419,111932397,111939630,111940645,111945357,111952712,111954029,111962312,111966703,111967824,111969909,111973817,111976289	Gene ID= ENSG00000144824.20 TPM= 7.2 Transcript Type= NA
chr3	111859716	111976289	111859716	111976289	+	transcript4702.chr3.nic@PHLDB2	transcript4702.chr3.nic	protein_coding	111859716,111884064,111913319,111919072,111920282,111939475,111940535,111945268,111948932,111952572,111953930,111962108,111966613,111967678,111969690,111973732,111974423	111859878,111885412,111913702,111919215,111920419,111939630,111940645,111945357,111949075,111952712,111954029,111962312,111966703,111967824,111969909,111973817,111976289	Gene ID= ENSG00000144824.20 TPM= 7.2 Transcript Type= NA
chr3	111859716	111976289	111859716	111976289	+	transcript4703.chr3.nic@PHLDB2	transcript4703.chr3.nic	protein_coding	111859716,111884064,111913319,111919072,111920282,111932269,111939475,111940535,111945268,111953930,111962108,111966613,111967678,111969690,111973732,111974423	111859878,111885412,111913702,111919215,111920419,111932397,111939630,111940645,111945357,111954029,111962312,111966703,111967824,111969909,111973817,111976289	Gene ID= ENSG00000144824.20 TPM= 8.37 Transcript Type= NA
chr3	111859811	111976289	111859811	111976289	+	transcript4704.chr3.nnic@PHLDB2	transcript4704.chr3.nnic	protein_coding	111859811,111884064,111913319,111919072,111920282,111939475,111940535,111945268,111952572,111953930,111962108,111966613,111967678,111969690,111973732,111974423	111859878,111885412,111913702,111919215,111920419,111939630,111940645,111945357,111952712,111954029,111962312,111966703,111967824,111969909,111973817,111976289	Gene ID= ENSG00000144824.20 TPM= 3.7 Transcript Type= NA
chr3	111859716	111976289	111859716	111976289	+	transcript4705.chr3.nic@PHLDB2	transcript4705.chr3.nic	protein_coding	111859716,111884064,111913319,111919072,111920282,111939475,111940535,111945268,111953930,111962108,111966613,111967678,111969690,111973732,111974423	111859878,111885412,111913702,111919215,111920419,111939630,111940645,111945357,111954029,111962312,111966703,111967824,111969909,111973817,111976289	Gene ID= ENSG00000144824.20 TPM= 3.7 Transcript Type= NA
chr3	111732497	111976267	111732497	111976267	+	ENST00000393923.7@PHLDB2	ENST00000393923.7	protein_coding	111732497,111845821,111884064,111913319,111919072,111920282,111939475,111940535,111945268,111948932,111952572,111953930,111962108,111966613,111967678,111969690,111973732,111974423	111732703,111845935,111885412,111913702,111919215,111920419,111939630,111940645,111945357,111949075,111952712,111954029,111962312,111966703,111967824,111969909,111973817,111976267	Gene ID= ENSG00000144824.20 TPM= 8.17 Transcript Type= protein_coding
chr3	111859796	111976247	111859796	111976247	+	ENST00000393925.7@PHLDB2	ENST00000393925.7	protein_coding	111859796,111884064,111913319,111919072,111920282,111932269,111939475,111940535,111945268,111948932,111952572,111953930,111962108,111966613,111967678,111969690,111973732,111974423	111859878,111885412,111913702,111919215,111920419,111932397,111939630,111940645,111945357,111949075,111952712,111954029,111962312,111966703,111967824,111969909,111973817,111976247	Gene ID= ENSG00000144824.20 TPM= 2.92 Transcript Type= protein_coding
chr3	111979035	111993363	111979035	111993363	+	ENST00000273359.7@ABHD10	ENST00000273359.7	protein_coding	111979035,111981784,111986264,111986914,111991377	111979203,111981967,111986375,111987051,111993363	Gene ID= ENSG00000144827.8 TPM= 37.36 Transcript Type= protein_coding
chr3	112086335	112118226	112086335	112118226	+	ENST00000431717.6@C3orf52	ENST00000431717.6	protein_coding	112086335,112093360,112102838,112116642	112086545,112093489,112102965,112118226	Gene ID= ENSG00000114529.12 TPM= 3.5 Transcript Type= protein_coding
chr3	112086342	112105842	112086342	112105842	+	transcript4725.chr3.nic@C3orf52	transcript4725.chr3.nic	protein_coding	112086342,112093360,112102838	112086545,112093489,112105842	Gene ID= ENSG00000114529.12 TPM= 2.34 Transcript Type= NA
chr3	112086349	112118210	112086349	112118210	+	ENST00000264848.9@C3orf52	ENST00000264848.9	protein_coding	112086349,112093360,112102838,112109543,112112964,112116642	112086545,112093489,112102965,112109613,112113145,112118210	Gene ID= ENSG00000114529.12 TPM= 19.85 Transcript Type= protein_coding
chr3	112120841	112133305	112120841	112133305	-	ENST00000308910.8@GCSAM	ENST00000308910.8	protein_coding	112133092,112130445,112128017,112126987,112125226,112120841	112133305,112130513,112128061,112127033,112125254,112123772	Gene ID= ENSG00000174500.12 TPM= 1.17 Transcript Type= protein_coding
chr3	112333156	112362812	112333156	112362812	+	ENST00000315711.12@CD200	ENST00000315711.12	protein_coding	112333156,112340902,112344962,112347558,112349712,112361543	112333224,112340983,112345288,112347830,112349819,112362812	Gene ID= ENSG00000091972.18 TPM= 7.01 Transcript Type= protein_coding
chr3	112333178	112362809	112333178	112362809	+	ENST00000478595.1@CD200	ENST00000478595.1	protein_coding	112333178,112344962,112347563,112349712,112361543	112333224,112345288,112347830,112349819,112362809	Gene ID= ENSG00000091972.18 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr3	112532509	112561908	112532509	112561908	-	transcript4734.chr3.nic@ATG3	transcript4734.chr3.nic	protein_coding	112561457,112558376,112553280,112550192,112548533,112541803,112538146,112537735,112536475,112534269,112532509	112561908,112558417,112553329,112550262,112548640,112544106,112538180,112537890,112536602,112534337,112532780	Gene ID= ENSG00000144848.10 TPM= 3.5 Transcript Type= NA
chr3	112532509	112561963	112532509	112561963	-	ENST00000283290.9@ATG3	ENST00000283290.9	protein_coding	112561457,112558376,112553280,112550192,112548533,112544057,112541803,112538146,112537735,112536475,112534269,112532509	112561963,112558417,112553329,112550262,112548640,112544106,112541884,112538180,112537890,112536602,112534337,112532780	Gene ID= ENSG00000144848.10 TPM= 105.08 Transcript Type= protein_coding
chr3	112532510	112561916	112532510	112561916	-	ENST00000402314.6@ATG3	ENST00000402314.6	protein_coding	112561457,112558376,112553280,112550192,112548533,112544057,112541803,112538146,112537735,112536475,112532510	112561916,112558417,112553329,112550262,112548640,112544106,112541884,112538180,112537890,112536602,112534337	Gene ID= ENSG00000144848.10 TPM= 3.5 Transcript Type= protein_coding
chr3	112561699	112584156	112561699	112584156	+	transcript4739.chr3.nic@SLC35A5	transcript4739.chr3.nic	protein_coding	112561699,112563385,112569171,112570540,112573889,112580546,112582671	112561822,112563533,112569269,112570670,112573956,112581326,112584156	Gene ID= ENSG00000138459.8 TPM= 3.5 Transcript Type= NA
chr3	112562010	112585577	112562010	112585577	+	ENST00000492406.5@SLC35A5	ENST00000492406.5	protein_coding	112562010,112563385,112569171,112570540,112573889,112580546,112582671	112562273,112563533,112569269,112570670,112573956,112581326,112585577	Gene ID= ENSG00000138459.8 TPM= 63.05 Transcript Type= protein_coding
chr3	112562072	112584156	112562072	112584156	+	ENST00000261034.6@SLC35A5	ENST00000261034.6	protein_coding	112562072,112563385,112569171,112570540,112573889,112580546,112581179,112582671	112562273,112563533,112569269,112570670,112573956,112580706,112581326,112584156	Gene ID= ENSG00000138459.8 TPM= 1.17 Transcript Type= protein_coding
chr3	112605101	112641300	112605101	112641300	-	ENST00000439685.6@CCDC80	ENST00000439685.6	protein_coding	112640924,112638028,112630113,112618968,112616710,112609978,112607176,112605101	112641300,112639916,112630269,112619104,112616858,112610081,112607256,112605763	Gene ID= ENSG00000091986.15 TPM= 4.67 Transcript Type= protein_coding
chr3	112638248	112641118	112638248	112641118	-	transcript4748.chr3.nic@CCDC80	transcript4748.chr3.nic	protein_coding	112640327,112638248	112641118,112639916	Gene ID= ENSG00000091986.15 TPM= 7.01 Transcript Type= NA
chr3	112922690	112975122	112922690	112975122	-	ENST00000308611.7@CD200R1	ENST00000308611.7	protein_coding	112974791,112947856,112931106,112929190,112928816,112925085,112924490,112922690	112975122,112947924,112931171,112929507,112929064,112925193,112924535,112923799	Gene ID= ENSG00000163606.10 TPM= 2.34 Transcript Type= protein_coding
chr3	112990918	113001342	112990918	113001342	+	ENST00000383678.6@GTPBP8	ENST00000383678.6	protein_coding	112990918,112993026,112995135,112996892,112999446,113000850	112991335,112993124,112995265,112996991,112999564,113001342	Gene ID= ENSG00000163607.15 TPM= 1.17 Transcript Type= protein_coding
chr3	113002440	113019839	113002440	113019839	-	ENST00000314400.9@NEPRO	ENST00000314400.9	protein_coding	113019542,113017448,113013953,113013272,113012734,113011045,113010643,113008171,113002440	113019839,113017602,113014032,113013403,113012811,113011406,113010704,113008430,113006004	Gene ID= ENSG00000163608.14 TPM= 3.5 Transcript Type= protein_coding
chr3	113002444	113019733	113002444	113019733	-	ENST00000383675.6@NEPRO	ENST00000383675.6	protein_coding	113019542,113017448,113013953,113011045,113010643,113008171,113002444	113019733,113017602,113014032,113011406,113010704,113008430,113006004	Gene ID= ENSG00000163608.14 TPM= 2.34 Transcript Type= protein_coding
chr3	113004917	113019706	113004917	113019706	-	ENST00000486271.5@NEPRO	ENST00000486271.5	protein_coding	113019542,113017448,113013953,113012734,113011045,113010643,113008171,113004917	113019706,113017602,113014032,113013403,113011406,113010704,113008430,113006004	Gene ID= ENSG00000163608.14 TPM= 1.17 Transcript Type= retained_intron
chr3	113211482	113287459	113211482	113287459	+	ENST00000495514.5@BOC	ENST00000495514.5	protein_coding	113211482,113216187,113249722,113250555,113268299,113270801,113272410,113273069,113274375,113278098,113278673,113279249,113279824,113280558,113281031,113283411,113284335,113284782,113285372,113286675	113212016,113216274,113249899,113250833,113268445,113270944,113272703,113273341,113274682,113278257,113278783,113279455,113280005,113280663,113281153,113283632,113284567,113284858,113285565,113287459	Gene ID= ENSG00000144857.14 TPM= 14.01 Transcript Type= protein_coding
chr3	113444636	113515188	113444636	113515188	-	transcript4780.chr3.nic@SPICE1	transcript4780.chr3.nic	protein_coding	113515080,113506507,113503180,113499439,113494049,113493206,113488945,113469099,113468762,113468139,113465653,113460617,113457136,113453466,113450336,113448038,113446589,113444636	113515188,113506605,113503227,113499582,113494142,113493312,113489063,113469238,113468899,113468404,113465784,113460764,113457357,113453950,113450516,113448140,113446676,113445360	Gene ID= ENSG00000163611.11 TPM= 12.26 Transcript Type= NA
chr3	113442718	113515156	113442718	113515156	-	ENST00000295872.8@SPICE1	ENST00000295872.8	protein_coding	113514897,113506507,113503180,113499439,113494049,113493206,113488945,113469099,113468762,113468139,113465653,113460617,113457136,113453466,113450336,113448038,113446589,113442718	113515156,113506605,113503227,113499582,113494142,113493312,113489063,113469238,113468899,113468404,113465784,113460764,113457357,113453950,113450516,113448140,113446676,113445360	Gene ID= ENSG00000163611.11 TPM= 1.17 Transcript Type= protein_coding
chr3	113497880	113515188	113497880	113515188	-	transcript4787.chr3.nic@SPICE1	transcript4787.chr3.nic	protein_coding	113515080,113506507,113503180,113497880	113515188,113506605,113503227,113499582	Gene ID= ENSG00000163611.11 TPM= 2.34 Transcript Type= NA
chr3	113532296	113629578	113532296	113629578	+	ENST00000264852.8@SIDT1	ENST00000264852.8	protein_coding	113532296,113566420,113567540,113576922,113580608,113581361,113583409,113584698,113585177,113593005,113601588,113603005,113603960,113604910,113607041,113608094,113608419,113611008,113612086,113616100,113619680,113623427,113623623,113626102,113627646	113533243,113566541,113567710,113576967,113580709,113581444,113583496,113584769,113585270,113593048,113601659,113603150,113604033,113604976,113607114,113608217,113608536,113611144,113612194,113616176,113619726,113623532,113623733,113626215,113629578	Gene ID= ENSG00000072858.10 TPM= 2.92 Transcript Type= protein_coding
chr3	113532521	113629578	113532521	113629578	+	transcript4789.chr3.nnic@SIDT1	transcript4789.chr3.nnic	protein_coding	113532521,113566420,113567540,113576922,113580608,113583409,113584698,113585177,113593005,113601588,113603005,113603960,113604910,113607041,113608094,113608419,113611008,113612086,113616100,113619680,113623427,113623623,113626102,113627646	113533243,113566541,113567710,113576967,113580709,113583496,113584769,113585270,113593048,113601659,113603150,113604033,113604976,113607114,113608217,113608536,113611144,113612194,113616176,113619726,113623532,113623733,113626215,113629578	Gene ID= ENSG00000072858.10 TPM= 4.09 Transcript Type= NA
chr3	113648385	113696646	113648385	113696646	-	ENST00000316407.8@USF3	ENST00000316407.8	protein_coding	113696370,113677282,113674832,113673348,113670121,113664313,113648385	113696646,113677397,113674896,113673376,113670203,113664409,113661425	Gene ID= ENSG00000176542.9 TPM= 45.54 Transcript Type= protein_coding
chr3	113721590	113746249	113721590	113746249	-	ENST00000481432.5@NAA50	ENST00000481432.5	protein_coding	113745942,113723981,113723422,113722906,113721590	113746249,113724095,113723541,113722972,113721937	Gene ID= ENSG00000121579.12 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr3	113747019	113812056	113747019	113812056	+	ENST00000273398.7@ATP6V1A	ENST00000273398.7	protein_coding	113747019,113778741,113781050,113784224,113784696,113786232,113788713,113789732,113794872,113795090,113795876,113798243,113803583,113805354,113809335	113747113,113778835,113781178,113784438,113784833,113786383,113788875,113789840,113794994,113795204,113795939,113798446,113803677,113805525,113812056	Gene ID= ENSG00000114573.9 TPM= 33.86 Transcript Type= protein_coding
chr3	113838418	113947174	113838418	113947174	+	ENST00000358160.8@GRAMD1C	ENST00000358160.8	protein_coding	113838418,113844503,113869507,113875484,113876165,113882752,113901031,113904140,113908958,113915701,113930714,113933511,113934432,113936266,113938086,113939886,113940240,113945398	113838936,113844649,113869591,113875587,113876260,113882832,113901146,113904272,113909120,113915838,113930832,113933653,113934535,113936442,113938143,113939996,113940345,113947174	Gene ID= ENSG00000178075.19 TPM= 1.17 Transcript Type= protein_coding
chr3	113897470	113947160	113897470	113947160	+	ENST00000440446.2@GRAMD1C	ENST00000440446.2	protein_coding	113897470,113901031,113904140,113908958,113915701,113930714,113933511,113934432,113936266,113938086,113939886,113940240,113945398	113897813,113901146,113904272,113909120,113915838,113930832,113933653,113934535,113936442,113938143,113939996,113940345,113947160	Gene ID= ENSG00000178075.19 TPM= 1.17 Transcript Type= protein_coding
chr3	113947901	113962978	113947901	113962978	+	transcript4805.chr3.nic@ZDHHC23	transcript4805.chr3.nic	protein_coding	113947901,113948794,113953700,113956339,113958363	113948190,113948963,113954410,113956506,113962978	Gene ID= ENSG00000184307.14 TPM= 3.5 Transcript Type= NA
chr3	113964137	114056613	113964137	114056613	-	ENST00000295878.7@CCDC191	ENST00000295878.7	protein_coding	114056377,114053597,114046591,114042703,114036608,114034925,114031626,114018678,114010772,114005508,114004637,114002456,114001595,113980650,113978858,113978186,113964137	114056613,114053635,114046732,114042846,114036786,114035148,114031779,114018868,114011021,114005962,114004746,114002538,114001696,113980793,113979010,113978331,113965359	Gene ID= ENSG00000163617.10 TPM= 1.17 Transcript Type= protein_coding
chr3	114056737	114088422	114056737	114088422	+	ENST00000281273.8@QTRT2	ENST00000281273.8	protein_coding	114056737,114056999,114065237,114066228,114067987,114070626,114076743,114079906,114082677,114085673	114056864,114057106,114065457,114066283,114068063,114070838,114076942,114080057,114082794,114088422	Gene ID= ENSG00000151576.10 TPM= 5.84 Transcript Type= protein_coding
chr3	114056735	114088349	114056735	114088349	+	ENST00000485050.5@QTRT2	ENST00000485050.5	protein_coding	114056735,114065237,114066228,114067987,114070626,114076743,114079906,114082677,114085673	114056864,114065457,114066283,114068063,114070838,114076942,114080057,114082794,114088349	Gene ID= ENSG00000151576.10 TPM= 22.18 Transcript Type= protein_coding
chr3	114291102	114310288	114291102	114310288	+	ENST00000486257.5@TIGIT	ENST00000486257.5	protein_coding	114291102,114294000,114295545,114299597,114307895	114291296,114294122,114295874,114299703,114310288	Gene ID= ENSG00000181847.11 TPM= 2.34 Transcript Type= protein_coding
chr3	114338094	115100293	114338094	115100293	-	transcript4842.chr3.nic@ZBTB20	transcript4842.chr3.nic	protein_coding	115100175,114974366,114900304,114801101,114693528,114500352,114389005,114380217,114350274,114338094	115100293,114974416,114900342,114801174,114693575,114500391,114389105,114380404,114351878,114339426	Gene ID= ENSG00000181722.16 TPM= 7.01 Transcript Type= NA
chr3	114338652	114624206	114338652	114624206	-	ENST00000481632.5@ZBTB20	ENST00000481632.5	protein_coding	114624116,114500352,114389005,114380217,114350274,114338652	114624206,114500391,114389105,114380404,114351878,114339426	Gene ID= ENSG00000181722.16 TPM= 3.5 Transcript Type= protein_coding
chr3	115809794	116444983	115809794	116444983	-	ENST00000333617.8@LSAMP	ENST00000333617.8	protein_coding	116444877,116086324,116019515,115852483,115842458,115841845,115834562,115816614,115809794	116444983,116086556,116019640,115852617,115842578,115841993,115834597,115816646,115810414	Gene ID= ENSG00000185565.11 TPM= 2.34 Transcript Type= protein_coding
chr3	119173518	119205153	119173518	119205153	+	ENST00000264234.7@UPK1B	ENST00000264234.7	protein_coding	119173518,119186714,119187775,119190245,119190982,119194219,119199057,119203917	119173638,119186810,119187975,119190319,119191104,119194398,119199140,119205153	Gene ID= ENSG00000114638.7 TPM= 9.34 Transcript Type= protein_coding
chr3	119211742	119240666	119211742	119240666	-	transcript4859.chr3.nic@B4GALT4	transcript4859.chr3.nic	protein_coding	119240565,119236853,119235145,119229847,119226809,119224058,119218650,119216240,119211742	119240666,119237070,119235227,119230244,119227041,119224245,119218772,119216344,119212681	Gene ID= ENSG00000121578.12 TPM= 2.92 Transcript Type= NA
chr3	119211742	119241103	119211742	119241103	-	ENST00000393765.6@B4GALT4	ENST00000393765.6	protein_coding	119240850,119236853,119229847,119226809,119224058,119218650,119216240,119211742	119241103,119237070,119230244,119227041,119224245,119218772,119216344,119212681	Gene ID= ENSG00000121578.12 TPM= 13.43 Transcript Type= protein_coding
chr3	119294420	119417719	119294420	119417719	+	transcript4875.chr3.nnic@ARHGAP31	transcript4875.chr3.nnic	protein_coding	119294420,119365316,119368372,119380904,119382292,119383084,119390785,119393467,119399199,119401882,119409496,119413856	119295004,119365418,119368516,119380986,119382399,119383226,119390983,119393591,119399261,119402397,119409776,119417719	Gene ID= ENSG00000031081.10 TPM= 4.67 Transcript Type= NA
chr3	119294427	119412404	119294427	119412404	+	transcript4877.chr3.nic@ARHGAP31	transcript4877.chr3.nic	protein_coding	119294427,119365316,119368372,119380904,119382292,119383084,119390785,119393467,119399199,119401822,119409496	119295004,119365418,119368516,119380986,119382399,119383226,119390983,119393591,119399261,119402397,119412404	Gene ID= ENSG00000031081.10 TPM= 3.5 Transcript Type= NA
chr3	119294373	119420714	119294373	119420714	+	ENST00000264245.8@ARHGAP31	ENST00000264245.8	protein_coding	119294373,119365316,119368372,119380904,119382292,119383084,119390785,119393467,119399199,119401822,119409496,119413856	119295004,119365418,119368516,119380986,119382399,119383226,119390983,119393591,119399261,119402397,119409776,119420714	Gene ID= ENSG00000031081.10 TPM= 30.36 Transcript Type= protein_coding
chr3	119296490	119300843	119296490	119300843	+	transcript4880.chr3.nnic@NA	transcript4880.chr3.nnic	NA	119296490	119300843	Gene ID= novel_gene_chr3_4881 TPM= 3.5 Transcript Type= NA
chr3	119424674	119426802	119424674	119426802	-	transcript4905.chr3.nnic@NA	transcript4905.chr3.nnic	NA	119424674	119426802	Gene ID= novel_gene_chr3_4906 TPM= 14.01 Transcript Type= NA
chr3	119429500	119463682	119429500	119463682	-	ENST00000319172.9@TMEM39A	ENST00000319172.9	protein_coding	119463336,119461962,119458018,119452447,119447018,119437755,119436791,119434762,119429500	119463682,119462148,119458240,119452530,119447172,119438103,119436978,119434882,119432214	Gene ID= ENSG00000176142.12 TPM= 3.5 Transcript Type= protein_coding
chr3	119468938	119494708	119468938	119494708	+	ENST00000295588.8@POGLUT1	ENST00000295588.8	protein_coding	119468938,119469820,119471309,119477313,119480051,119485328,119486833,119488929,119490551,119491518,119492282	119469106,119469910,119471452,119477448,119480172,119485387,119486932,119488987,119490718,119491574,119494708	Gene ID= ENSG00000163389.10 TPM= 11.68 Transcript Type= protein_coding
chr3	119517981	119522104	119517981	119522104	-	transcript4927.chr3.nnic@NA	transcript4927.chr3.nnic	NA	119517981	119522104	Gene ID= novel_gene_chr3_4928 TPM= 2.34 Transcript Type= NA
chr3	119579471	119589945	119579471	119589945	+	transcript4923.chr3.nic@ADPRH	transcript4923.chr3.nic	protein_coding	119579471,119580485,119582134,119586285,119587464	119579851,119580636,119582467,119586645,119589945	Gene ID= ENSG00000144843.11 TPM= 18.1 Transcript Type= NA
chr3	119579676	119589945	119579676	119589945	+	ENST00000357003.7@ADPRH	ENST00000357003.7	protein_coding	119579676,119580551,119582134,119586285,119587464	119579851,119580636,119582467,119586645,119589945	Gene ID= ENSG00000144843.11 TPM= 53.13 Transcript Type= protein_coding
chr3	119597804	119629811	119597804	119629811	+	transcript4933.chr3.nnic@PLA1A	transcript4933.chr3.nnic	protein_coding	119597804,119606774,119608770,119609468,119616012,119618019,119619563,119625124,119628701,119629384	119597986,119606975,119608947,119609576,119616101,119618186,119619652,119625232,119628865,119629811	Gene ID= ENSG00000144837.8 TPM= 5.25 Transcript Type= NA
chr3	119597842	119629811	119597842	119629811	+	ENST00000273371.8@PLA1A	ENST00000273371.8	protein_coding	119597842,119606774,119608770,119609468,119613017,119616012,119618019,119619563,119625124,119628701,119629384	119597986,119606975,119608947,119609576,119613118,119616101,119618186,119619652,119625232,119628865,119629811	Gene ID= ENSG00000144837.8 TPM= 40.28 Transcript Type= protein_coding
chr3	119669532	119677346	119669532	119677346	-	ENST00000484810.5@COX17	ENST00000484810.5	protein_coding	119677204,119676862,119675145,119669532	119677346,119676966,119675233,119669665	Gene ID= ENSG00000138495.6 TPM= 1.17 Transcript Type= protein_coding
chr3	119821323	120094417	119821323	120094417	-	ENST00000264235.12@GSK3B	ENST00000264235.12	protein_coding	120093347,120002046,119947268,119923373,119916044,119912704,119905755,119876413,119863419,119843255,119821323	120094417,120002239,119947351,119923483,119916174,119912810,119905852,119876508,119863605,119843353,119826855	Gene ID= ENSG00000082701.14 TPM= 17.51 Transcript Type= protein_coding
chr3	120327248	120349329	120327248	120349329	-	transcript4946.chr3.nnic@LRRC58	transcript4946.chr3.nnic	protein_coding	120348744,120348223,120335825,120334862,120327248	120349329,120348314,120335953,120335139,120331408	Gene ID= ENSG00000163428.3 TPM= 3.5 Transcript Type= NA
chr3	120324509	120349339	120324509	120349339	-	ENST00000295628.3@LRRC58	ENST00000295628.3	protein_coding	120348744,120335825,120334862,120324509	120349339,120335953,120335139,120331408	Gene ID= ENSG00000163428.3 TPM= 2.34 Transcript Type= protein_coding
chr3	120394279	120450998	120394279	120450998	-	transcript4955.chr3.nic@FSTL1	transcript4955.chr3.nic	protein_coding	120450684,120415923,120411854,120410952,120409532,120404853,120403242,120402808,120399883,120394279	120450998,120416027,120411983,120410984,120409662,120404971,120403354,120402918,120399959,120396996	Gene ID= ENSG00000163430.11 TPM= 56.63 Transcript Type= NA
chr3	120596357	120602328	120596357	120602328	+	ENST00000491335.1@NDUFB4	ENST00000491335.1	protein_coding	120596357,120601111,120602208	120596646,120601257,120602328	Gene ID= ENSG00000065518.7 TPM= 5.84 Transcript Type= nonsense_mediated_decay
chr3	120596328	120602324	120596328	120602324	+	ENST00000485064.1@NDUFB4	ENST00000485064.1	protein_coding	120596328,120601111	120596539,120602324	Gene ID= ENSG00000065518.7 TPM= 2.34 Transcript Type= protein_coding
chr3	120596349	120602319	120596349	120602319	+	transcript4965.chr3.nnic@NA	transcript4965.chr3.nnic	NA	120596349	120602319	Gene ID= novel_gene_chr3_4966 TPM= 7.01 Transcript Type= NA
chr3	120686681	120742537	120686681	120742537	-	ENST00000273375.7@RABL3	ENST00000273375.7	protein_coding	120742462,120730696,120709780,120706000,120698423,120694153,120690449,120686681	120742537,120730787,120709909,120706114,120698573,120694224,120690487,120689888	Gene ID= ENSG00000144840.8 TPM= 5.25 Transcript Type= protein_coding
chr3	120687227	120742541	120687227	120742541	-	transcript4972.chr3.nnic@RABL3	transcript4972.chr3.nnic	protein_coding	120742462,120730696,120709780,120706000,120698423,120694153,120687227	120742541,120730787,120709909,120706114,120698573,120694224,120689888	Gene ID= ENSG00000144840.8 TPM= 2.92 Transcript Type= NA
chr3	120742732	120783069	120742732	120783069	+	ENST00000283875.5@GTF2E1	ENST00000283875.5	protein_coding	120742732,120750523,120770728,120776423,120781043	120742794,120751000,120770929,120776664,120783069	Gene ID= ENSG00000153767.9 TPM= 11.68 Transcript Type= protein_coding
chr3	121631399	121660947	121631399	121660947	-	transcript4981.chr3.nic@HCLS1	transcript4981.chr3.nic	protein_coding	121660820,121658264,121657279,121647319,121642927,121637146,121636434,121635735,121634207,121633067,121632332,121632101,121631399	121660947,121658347,121657352,121647448,121644928,121637256,121636489,121635804,121634418,121633171,121632563,121632184,121631982	Gene ID= ENSG00000180353.10 TPM= 8.17 Transcript Type= NA
chr3	121631399	121660911	121631399	121660911	-	ENST00000314583.7@HCLS1	ENST00000314583.7	protein_coding	121660820,121658264,121657279,121647319,121644818,121642927,121637146,121636434,121635735,121634207,121633067,121632332,121632101,121631399	121660911,121658347,121657352,121647448,121644928,121642981,121637256,121636489,121635804,121634418,121633171,121632563,121632184,121631982	Gene ID= ENSG00000180353.10 TPM= 123.76 Transcript Type= protein_coding
chr3	121640867	121642317	121640867	121642317	+	transcript4985.chr3.nnic@NA	transcript4985.chr3.nnic	NA	121640867	121642317	Gene ID= novel_gene_chr3_4986 TPM= 9.34 Transcript Type= NA
chr3	121664101	121749722	121664101	121749722	-	ENST00000482512.5@GOLGB1	ENST00000482512.5	protein_coding	121749632,121730848,121729865,121729188,121726913,121722262,121719646,121718388,121716737,121714861,121702481,121699812,121693741,121690670,121681687,121677285,121676893,121669212,121668061,121667476,121664926,121664101	121749722,121730973,121730017,121729340,121727041,121722378,121719768,121718501,121717139,121714976,121702595,121699885,121698929,121692581,121681865,121677450,121677030,121669355,121668158,121667610,121665031,121664614	Gene ID= ENSG00000173230.15 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr3	121769763	121835079	121769763	121835079	-	ENST00000310864.10@IQCB1	ENST00000310864.10	protein_coding	121834966,121834391,121828861,121828470,121826051,121808916,121807344,121799196,121797118,121795457,121790073,121788284,121781743,121772557,121769763	121835079,121834479,121828972,121828632,121826180,121809009,121807443,121799374,121797227,121795566,121790215,121788432,121781874,121772713,121770574	Gene ID= ENSG00000173226.16 TPM= 2.34 Transcript Type= protein_coding
chr3	121769994	121835058	121769994	121835058	-	transcript5006.chr3.nic@IQCB1	transcript5006.chr3.nic	protein_coding	121834966,121834391,121828861,121826051,121808916,121807344,121799196,121797118,121795457,121790073,121788284,121781743,121772557,121769994	121835058,121834479,121828972,121826180,121809009,121807443,121799374,121797227,121795566,121790215,121788432,121781874,121772713,121770574	Gene ID= ENSG00000173226.16 TPM= 2.34 Transcript Type= NA
chr3	121835215	121886526	121835215	121886526	+	ENST00000273668.6@EAF2	ENST00000273668.6	protein_coding	121835215,121844453,121854687,121857011,121872537,121886342	121835391,121844547,121854823,121857156,121872788,121886526	Gene ID= ENSG00000145088.8 TPM= 4.67 Transcript Type= protein_coding
chr3	121894471	121933235	121894471	121933235	+	transcript5027.chr3.nnic@SLC15A2	transcript5027.chr3.nnic	protein_coding	121894471,121896406,121897388,121911574,121913021,121915227,121915616,121922220,121922775,121923040,121923222,121924351,121924945,121927758,121928421,121928982,121929302,121930840,121931126,121931639,121931924	121894581,121896493,121897529,121911666,121913120,121915317,121915693,121922302,121922861,121923129,121923266,121924383,121925033,121927839,121928555,121929146,121929348,121930950,121931209,121931735,121933235	Gene ID= ENSG00000163406.10 TPM= 2.34 Transcript Type= NA
chr3	121987323	122022282	121987323	122022282	-	transcript5034.chr3.nnic@ILDR1	transcript5034.chr3.nnic	protein_coding	122022020,122006991,122005244,122001745,122001308,121994182,121993191,121987323	122022282,122007161,122005393,122001864,122001454,121994313,121993970,121988408	Gene ID= ENSG00000145103.12 TPM= 4.67 Transcript Type= NA
chr3	121992040	122022282	121992040	122022282	-	transcript5038.chr3.nic@ILDR1	transcript5038.chr3.nic	protein_coding	122022020,122006991,122005244,122001745,122001308,121994182,121992040	122022282,122007161,122005393,122001864,122001454,121994313,121993970	Gene ID= ENSG00000145103.12 TPM= 2.34 Transcript Type= NA
chr3	121987323	122022183	121987323	122022183	-	ENST00000273691.7@ILDR1	ENST00000273691.7	protein_coding	122022020,122006991,122005244,122001745,122001308,121993150,121987323	122022183,122007161,122005393,122001864,122001454,121993970,121988408	Gene ID= ENSG00000145103.12 TPM= 3.5 Transcript Type= protein_coding
chr3	122055374	122121136	122055374	122121136	+	ENST00000330540.6@CD86	ENST00000330540.6	protein_coding	122055374,122091601,122103512,122106198,122109265,122118048,122119438	122055503,122091650,122103847,122106500,122109408,122118093,122121136	Gene ID= ENSG00000114013.15 TPM= 12.84 Transcript Type= protein_coding
chr3	122325244	122341972	122325244	122341972	+	ENST00000264474.3@CSTA	ENST00000264474.3	protein_coding	122325244,122337547,122341439	122325358,122337648,122341972	Gene ID= ENSG00000121552.3 TPM= 8.17 Transcript Type= protein_coding
chr3	122359591	122383231	122359591	122383231	-	ENST00000291458.9@CCDC58	ENST00000291458.9	protein_coding	122383174,122371675,122368176,122362968,122359591	122383231,122371800,122368322,122363027,122359919	Gene ID= ENSG00000160124.9 TPM= 8.17 Transcript Type= protein_coding
chr3	122384182	122412334	122384182	122412334	+	ENST00000477892.5@FAM162A	ENST00000477892.5	protein_coding	122384182,122402760,122404258,122407281,122409739	122384299,122402882,122404363,122407389,122412334	Gene ID= ENSG00000114023.15 TPM= 5.84 Transcript Type= protein_coding
chr3	122412332	122416051	122412332	122416051	-	ENST00000330689.5@WDR5B	ENST00000330689.5	protein_coding	122412332	122416051	Gene ID= ENSG00000196981.3 TPM= 7.01 Transcript Type= protein_coding
chr3	122421949	122514928	122421949	122514928	-	ENST00000344337.10@KPNA1	ENST00000344337.10	protein_coding	122514757,122496437,122467322,122463942,122461224,122453870,122451976,122451534,122449574,122442038,122437170,122433661,122427538,122421949	122514928,122496570,122467429,122464041,122461318,122454001,122452064,122451633,122449737,122442116,122437295,122433788,122427716,122427172	Gene ID= ENSG00000114030.12 TPM= 8.17 Transcript Type= protein_coding
chr3	122493556	122495273	122493556	122495273	+	transcript5073.chr3.nnic@NA	transcript5073.chr3.nnic	NA	122493556	122495273	Gene ID= novel_gene_chr3_5074 TPM= 2.34 Transcript Type= NA
chr3	122527924	122564288	122527924	122564288	-	transcript5093.chr3.nnic@PARP9	transcript5093.chr3.nnic	protein_coding	122564245,122559606,122558329,122555286,122552418,122550584,122545432,122540472,122536934,122536168,122527924	122564288,122559709,122558467,122556121,122552639,122550802,122545489,122540852,122537073,122536342,122528743	Gene ID= ENSG00000138496.16 TPM= 21.19 Transcript Type= NA
chr3	122527924	122564288	122527924	122564288	-	transcript5095.chr3.nnic@PARP9	transcript5095.chr3.nnic	protein_coding	122564245,122559606,122558434,122555286,122552418,122550584,122545432,122540472,122536934,122536168,122527924	122564288,122559709,122558467,122556121,122552639,122550802,122545489,122540852,122537073,122536342,122528743	Gene ID= ENSG00000138496.16 TPM= 118.69 Transcript Type= NA
chr3	122527924	122556173	122527924	122556173	-	transcript5104.chr3.nic@PARP9	transcript5104.chr3.nic	protein_coding	122555286,122552418,122550584,122545432,122540472,122536934,122536168,122527924	122556173,122552639,122550802,122545489,122540852,122537073,122536342,122528743	Gene ID= ENSG00000138496.16 TPM= 11.27 Transcript Type= NA
chr3	122564238	122575203	122564238	122575203	+	ENST00000296161.8@DTX3L	ENST00000296161.8	protein_coding	122564238,122565859,122568489,122570455,122571678	122564613,122566070,122570024,122570672,122575203	Gene ID= ENSG00000163840.9 TPM= 81.73 Transcript Type= protein_coding
chr3	122680618	122730840	122680618	122730840	+	ENST00000474629.6@PARP14	ENST00000474629.6	protein_coding	122680618,122685185,122687080,122692301,122695426,122699390,122703742,122704527,122708190,122713424,122713872,122714262,122718071,122718359,122720255,122727812,122728308	122681070,122685318,122687113,122692543,122695662,122701635,122703978,122704748,122708268,122713573,122713934,122714429,122718277,122718958,122720388,122727986,122730840	Gene ID= ENSG00000173193.13 TPM= 26.27 Transcript Type= protein_coding
chr3	122681207	122730840	122681207	122730840	+	transcript5129.chr3.nnic@PARP14	transcript5129.chr3.nnic	protein_coding	122681207,122685185,122687080,122692301,122695426,122699390,122703742,122704527,122708190,122713424,122713872,122714262,122718071,122718359,122720255,122727812,122728308	122681317,122685318,122687113,122692543,122695662,122701635,122703978,122704748,122708268,122713573,122713934,122714429,122718277,122718958,122720388,122727986,122730840	Gene ID= ENSG00000173193.13 TPM= 19.27 Transcript Type= NA
chr3	122740003	122793824	122740003	122793824	-	ENST00000306103.2@HSPBAP1	ENST00000306103.2	protein_coding	122793617,122777721,122768701,122759224,122755260,122752591,122741003,122740003	122793824,122777906,122768882,122759360,122755431,122752674,122741113,122740875	Gene ID= ENSG00000169087.10 TPM= 14.01 Transcript Type= protein_coding
chr3	122753444	122758914	122753444	122758914	+	transcript5141.chr3.nnic@NA	transcript5141.chr3.nnic	NA	122753444	122758914	Gene ID= novel_gene_chr3_5142 TPM= 12.84 Transcript Type= NA
chr3	122794795	122881139	122794795	122881139	+	ENST00000261038.5@DIRC2	ENST00000261038.5	protein_coding	122794795,122806857,122826800,122833317,122845763,122856307,122860075,122872415,122879263	122795535,122806950,122827065,122833446,122845871,122856374,122860202,122872597,122881139	Gene ID= ENSG00000138463.8 TPM= 10.51 Transcript Type= protein_coding
chr3	122886941	122892416	122886941	122892416	+	ENST00000610128.2@LINC02035	ENST00000610128.2	lincRNA	122886941	122892416	Gene ID= ENSG00000273033.2 TPM= 1.17 Transcript Type= lincRNA
chr3	123067069	123162103	123067069	123162103	+	transcript5153.chr3.nic@PDIA5	transcript5153.chr3.nic	protein_coding	123067069,123089168,123092355,123102411,123102751,123106749,123110944,123116231,123124066,123124272,123130480,123145522,123146099,123150234,123154971,123161321	123067206,123089294,123092442,123102494,123102796,123106841,123111004,123116298,123124157,123124343,123130616,123145592,123146259,123150364,123155041,123162103	Gene ID= ENSG00000065485.19 TPM= 4.67 Transcript Type= NA
chr3	123067070	123162104	123067070	123162104	+	ENST00000316218.11@PDIA5	ENST00000316218.11	protein_coding	123067070,123089168,123092355,123102411,123102751,123106749,123110944,123116231,123124066,123124272,123130480,123145522,123146099,123150234,123154971,123161321,123161880	123067206,123089294,123092442,123102494,123102796,123106841,123111004,123116298,123124157,123124343,123130616,123145592,123146259,123150364,123155041,123161455,123162104	Gene ID= ENSG00000065485.19 TPM= 47.29 Transcript Type= protein_coding
chr3	123067062	123162104	123067062	123162104	+	ENST00000489923.5@PDIA5	ENST00000489923.5	protein_coding	123067062,123089168,123092355,123102411,123102751,123106749,123110944,123116231,123124066,123124272,123145522,123146118,123150234,123154971,123161321,123161880	123067206,123089294,123092442,123102494,123102796,123106841,123111004,123116298,123124157,123124343,123145592,123146259,123150364,123155041,123161455,123162104	Gene ID= ENSG00000065485.19 TPM= 1.75 Transcript Type= nonsense_mediated_decay
chr3	123067079	123070102	123067079	123070102	+	transcript5158.chr3.nnic@NA	transcript5158.chr3.nnic	NA	123067079	123070102	Gene ID= novel_gene_chr3_5159 TPM= 5.84 Transcript Type= NA
chr3	123282296	123449758	123282296	123449758	-	ENST00000462833.5@ADCY5	ENST00000462833.5	protein_coding	123447412,123352432,123347782,123332564,123330889,123328644,123327618,123325322,123320749,123319674,123318020,123314235,123304067,123303055,123300120,123297353,123296084,123291113,123289750,123286685,123282296	123449758,123352581,123347903,123332675,123331016,123328802,123327759,123325462,123320771,123319818,123318117,123314322,123304183,123303219,123300295,123297382,123296216,123291376,123289954,123286809,123284736	Gene ID= ENSG00000173175.14 TPM= 5.84 Transcript Type= protein_coding
chr3	123491554	123585185	123491554	123585185	-	ENST00000383657.9@HACD2	ENST00000383657.9	protein_coding	123584873,123582212,123567762,123528386,123502560,123500515,123491554	123585185,123582329,123567780,123528474,123502681,123500693,123494970	Gene ID= ENSG00000206527.9 TPM= 158.79 Transcript Type= protein_coding
chr3	123614029	123884375	123614029	123884375	-	transcript5178.chr3.nnic@MYLK	transcript5178.chr3.nnic	protein_coding	123884206,123831548,123793677,123752331,123739953,123738897,123737378,123735398,123733687,123725944,123722128,123709756,123708698,123707754,123701438,123700020,123692735,123682224,123667137,123666219,123664105,123657126,123649162,123648971,123647224,123640287,123638071,123629474,123626818,123620207,123618639,123614029	123884375,123831670,123793844,123752538,123740001,123739062,123737543,123735416,123734222,123726078,123722280,123709893,123708895,123708003,123701509,123701005,123692851,123682310,123667187,123666346,123664258,123657428,123649194,123649064,123647427,123640504,123638194,123629626,123626941,123620336,123618770,123614349	Gene ID= ENSG00000065534.18 TPM= 22.18 Transcript Type= NA
chr3	123612310	123800232	123612310	123800232	-	transcript5179.chr3.nnic@MYLK	transcript5179.chr3.nnic	protein_coding	123799838,123793677,123752331,123739953,123738897,123737378,123735398,123733687,123725944,123722128,123709756,123708698,123707754,123701438,123700020,123692735,123682224,123667137,123666219,123664105,123657126,123649162,123648971,123647224,123640287,123638071,123629474,123626818,123620207,123618639,123612310	123800232,123793844,123752538,123740001,123739062,123737543,123735416,123734222,123726078,123722280,123709893,123708895,123708003,123701509,123701005,123692851,123682310,123667187,123666346,123664258,123657428,123649194,123649064,123647427,123640504,123638194,123629626,123626941,123620336,123618770,123614349	Gene ID= ENSG00000065534.18 TPM= 43.4 Transcript Type= NA
chr3	123612310	123701257	123612310	123701257	-	transcript5181.chr3.nic@MYLK	transcript5181.chr3.nic	protein_coding	123700020,123692735,123682224,123667137,123666219,123664105,123657126,123649162,123648971,123647224,123640287,123638071,123629474,123626818,123620207,123618639,123612310	123701257,123692851,123682310,123667187,123666346,123664258,123657428,123649194,123649064,123647427,123640504,123638194,123629626,123626941,123620336,123618770,123614349	Gene ID= ENSG00000065534.18 TPM= 42.23 Transcript Type= NA
chr3	123612310	123692402	123612310	123692402	-	transcript5184.chr3.nic@MYLK	transcript5184.chr3.nic	protein_coding	123692283,123682224,123667137,123666219,123664105,123657126,123649162,123648971,123647224,123640287,123638071,123629474,123626818,123620207,123618639,123612310	123692402,123682310,123667187,123666346,123664258,123657428,123649194,123649064,123647427,123640504,123638194,123629626,123626941,123620336,123618770,123614349	Gene ID= ENSG00000065534.18 TPM= 40.87 Transcript Type= NA
chr3	123736810	123737235	123736810	123737235	+	transcript5198.chr3.nnic@NA	transcript5198.chr3.nnic	NA	123736810	123737235	Gene ID= novel_gene_chr3_5199 TPM= 2.34 Transcript Type= NA
chr3	123913725	123961434	123913725	123961434	-	transcript5207.chr3.nic@CCDC14	transcript5207.chr3.nic	protein_coding	123961144,123956355,123955843,123948896,123948691,123946803,123944849,123933673,123931308,123931102,123913725	123961434,123956795,123956115,123949132,123948785,123947319,123944990,123933755,123931526,123931234,123915718	Gene ID= ENSG00000175455.14 TPM= 8.17 Transcript Type= NA
chr3	123924478	123927266	123924478	123927266	+	transcript5214.chr3.nnic@NA	transcript5214.chr3.nnic	NA	123924478	123927266	Gene ID= novel_gene_chr3_5215 TPM= 3.5 Transcript Type= NA
chr3	124730366	124749273	124730366	124749273	+	ENST00000232607.6@UMPS	ENST00000232607.6	protein_coding	124730366,124735093,124737568,124740024,124742152,124743915	124730627,124735246,124738239,124740199,124742266,124749273	Gene ID= ENSG00000114491.13 TPM= 24.52 Transcript Type= protein_coding
chr3	124762948	124887596	124762948	124887596	-	transcript5231.chr3.nic@ITGB5	transcript5231.chr3.nic	protein_coding	124886931,124873446,124859242,124848309,124841383,124821313,124819739,124817621,124796388,124773690,124769013,124766226,124764391,124762948	124887596,124873531,124859446,124848558,124841551,124821474,124819834,124817710,124796817,124773912,124769113,124766345,124764557,124763718	Gene ID= ENSG00000082781.11 TPM= 11.52 Transcript Type= NA
chr3	124761948	124887297	124761948	124887297	-	ENST00000296181.8@ITGB5	ENST00000296181.8	protein_coding	124886931,124873446,124859242,124848309,124841383,124821313,124819739,124817621,124809022,124796388,124773690,124769013,124766226,124764391,124761948	124887297,124873531,124859446,124848558,124841551,124821474,124819834,124817710,124809156,124796817,124773912,124769113,124766345,124764557,124763718	Gene ID= ENSG00000082781.11 TPM= 23.35 Transcript Type= protein_coding
chr3	124967477	125056141	124967477	125056141	-	transcript5243.chr3.nic@HEG1	transcript5243.chr3.nic	protein_coding	125055575,125029195,125027205,125020792,125019262,125014713,125012623,125010439,125009705,125005265,125002257,125001852,124997689,124990944,124990787,124977859,124973731,124967477	125056141,125029488,125027507,125021130,125019597,125015012,125013990,125010555,125009824,125005368,125002315,125002012,124997823,124990986,124990824,124977946,124973905,124970801	Gene ID= ENSG00000173706.12 TPM= 46.12 Transcript Type= NA
chr3	124965710	125055958	124965710	125055958	-	ENST00000311127.8@HEG1	ENST00000311127.8	protein_coding	125055575,125029195,125027205,125020792,125019262,125012623,125010439,125009705,125005265,125002257,125001852,124997689,124990944,124990787,124977859,124973731,124965710	125055958,125029488,125027507,125021130,125019597,125013990,125010555,125009824,125005368,125002315,125002012,124997823,124990986,124990824,124977946,124973905,124970801	Gene ID= ENSG00000173706.12 TPM= 46.12 Transcript Type= protein_coding
chr3	125082638	125211399	125082638	125211399	-	ENST00000393469.8@SLC12A8	ENST00000393469.8	protein_coding	125211299,125190375,125187237,125177743,125135669,125120599,125118769,125110189,125107481,125092101,125091439,125088310,125082638	125211399,125190521,125187428,125177974,125135782,125120686,125118856,125110335,125108126,125092198,125091556,125088370,125084052	Gene ID= ENSG00000221955.10 TPM= 4.67 Transcript Type= protein_coding
chr3	125083157	125212765	125083157	125212765	-	ENST00000469902.5@SLC12A8	ENST00000469902.5	protein_coding	125212700,125211299,125190375,125187237,125177743,125135669,125120599,125118769,125110189,125107481,125092101,125091439,125088310,125083157	125212765,125211394,125190521,125187428,125177974,125135782,125120686,125118856,125110335,125108126,125092198,125091556,125088370,125084052	Gene ID= ENSG00000221955.10 TPM= 18.68 Transcript Type= protein_coding
chr3	125225561	125375354	125225561	125375354	-	ENST00000360647.8@ZNF148	ENST00000360647.8	protein_coding	125375102,125331158,125323309,125313308,125288103,125279124,125277726,125234211,125225561	125375354,125331238,125323444,125313656,125288228,125279247,125277809,125234329,125233939	Gene ID= ENSG00000163848.19 TPM= 9.34 Transcript Type= protein_coding
chr3	125446653	125520206	125446653	125520206	-	transcript5269.chr3.nnic@SNX4	transcript5269.chr3.nnic	protein_coding	125520032,125504623,125498059,125497834,125497341,125489408,125480247,125476695,125469454,125460771,125457266,125453810,125451305,125449297,125446653	125520206,125504744,125498194,125497983,125497388,125489463,125480319,125476756,125469519,125460860,125457365,125453955,125451419,125449411,125447826	Gene ID= ENSG00000114520.10 TPM= 3.5 Transcript Type= NA
chr3	125446644	125520197	125446644	125520197	-	ENST00000251775.8@SNX4	ENST00000251775.8	protein_coding	125520032,125504623,125498059,125497834,125497341,125489408,125480247,125476695,125469454,125460771,125457266,125453810,125451305,125446644	125520197,125504744,125498194,125497983,125497388,125489463,125480319,125476756,125469519,125460860,125457365,125453955,125451419,125447826	Gene ID= ENSG00000114520.10 TPM= 116.76 Transcript Type= protein_coding
chr3	125916620	125930010	125916620	125930010	+	ENST00000467239.5@FAM86JP	ENST00000467239.5	transcribed_unprocessed_pseudogene	125916620,125918864,125920825,125924966,125928495	125916719,125918926,125920905,125925115,125930010	Gene ID= ENSG00000171084.15 TPM= 2.34 Transcript Type= processed_transcript
chr3	125929275	125937039	125929275	125937039	-	ENST00000340333.7@ALG1L	ENST00000340333.7	protein_coding	125936898,125933575,125932650,125931638,125930557,125929275	125937039,125933696,125932709,125931752,125930629,125929567	Gene ID= ENSG00000189366.9 TPM= 1.17 Transcript Type= protein_coding
chr3	126006363	126084012	126006363	126084012	-	transcript5298.chr3.nic@SLC41A3	transcript5298.chr3.nic	protein_coding	126083929,126067947,126050943,126033607,126026335,126022786,126016731,126015494,126012615,126008732,126006363	126084012,126068246,126051050,126033678,126026479,126022932,126016875,126015573,126012749,126008880,126007225	Gene ID= ENSG00000114544.16 TPM= 6.22 Transcript Type= NA
chr3	126006363	126084277	126006363	126084277	-	transcript5300.chr3.nic@SLC41A3	transcript5300.chr3.nic	protein_coding	126084093,126067947,126033607,126026335,126022786,126016731,126015494,126012615,126008732,126006363	126084277,126068246,126033678,126026479,126022932,126016875,126015573,126012749,126008880,126007225	Gene ID= ENSG00000114544.16 TPM= 6.22 Transcript Type= NA
chr3	126006355	126084109	126006355	126084109	-	ENST00000360370.8@SLC41A3	ENST00000360370.8	protein_coding	126084093,126067947,126050943,126033607,126026335,126022786,126016731,126015494,126012615,126008732,126006355	126084109,126068246,126051050,126033678,126026479,126022932,126016875,126015573,126012749,126008880,126007225	Gene ID= ENSG00000114544.16 TPM= 17.9 Transcript Type= protein_coding
chr3	126006373	126084304	126006373	126084304	-	ENST00000315891.10@SLC41A3	ENST00000315891.10	protein_coding	126084093,126067947,126050943,126033607,126026335,126022786,126016731,126015494,126012615,126008732,126007114,126006373	126084304,126068246,126051050,126033678,126026479,126022932,126016875,126015573,126012749,126008880,126007225,126006564	Gene ID= ENSG00000114544.16 TPM= 5.84 Transcript Type= protein_coding
chr3	126342635	126357451	126342635	126357451	-	transcript5309.chr3.nnic@KLF15	transcript5309.chr3.nnic	protein_coding	126357237,126351841,126343272,126342635	126357451,126352947,126343895,126342950	Gene ID= ENSG00000163884.3 TPM= 7.01 Transcript Type= NA
chr3	126342637	126357451	126342637	126357451	-	transcript5311.chr3.nnic@KLF15	transcript5311.chr3.nnic	protein_coding	126357237,126351854,126342637	126357451,126352947,126342950	Gene ID= ENSG00000163884.3 TPM= 2.34 Transcript Type= NA
chr3	126437601	126475944	126437601	126475944	-	transcript5318.chr3.nnic@ZXDC	transcript5318.chr3.nnic	protein_coding	126474959,126472153,126471973,126470895,126466155,126461535,126439632,126437601	126475944,126472305,126472051,126471025,126466325,126462220,126439727,126438461	Gene ID= ENSG00000070476.14 TPM= 3.79 Transcript Type= NA
chr3	126458238	126476008	126458238	126476008	-	transcript5322.chr3.nic@ZXDC	transcript5322.chr3.nic	protein_coding	126474959,126472153,126471973,126470895,126466155,126461535,126458238	126476008,126472305,126472051,126471025,126466325,126462220,126459737	Gene ID= ENSG00000070476.14 TPM= 4.09 Transcript Type= NA
chr3	126437601	126444271	126437601	126444271	-	transcript5332.chr3.nic@ZXDC	transcript5332.chr3.nic	protein_coding	126441765,126439632,126437601	126444271,126439727,126438461	Gene ID= ENSG00000070476.14 TPM= 3.21 Transcript Type= NA
chr3	126437601	126443409	126437601	126443409	-	ENST00000514463.1@ZXDC	ENST00000514463.1	protein_coding	126439632,126437601	126443409,126438461	Gene ID= ENSG00000070476.14 TPM= 12.55 Transcript Type= retained_intron
chr3	126437601	126475919	126437601	126475919	-	ENST00000389709.7@ZXDC	ENST00000389709.7	protein_coding	126474959,126472153,126471973,126470895,126466155,126461535,126459653,126441765,126439632,126437601	126475919,126472305,126472051,126471025,126466325,126462220,126459737,126441946,126439727,126438461	Gene ID= ENSG00000070476.14 TPM= 24.81 Transcript Type= protein_coding
chr3	126524283	126543291	126524283	126543291	+	ENST00000319340.6@CHST13	ENST00000319340.6	protein_coding	126524283,126536271,126541733	126524429,126536353,126543291	Gene ID= ENSG00000180767.9 TPM= 5.84 Transcript Type= protein_coding
chr3	126607489	126655098	126607489	126655098	-	transcript5340.chr3.nnic@TXNRD3	transcript5340.chr3.nnic	protein_coding	126654457,126647236,126646111,126644297,126643981,126642032,126633909,126631764,126630712,126629379,126622464,126621742,126615355,126611037,126608499,126607489	126655098,126647296,126646220,126644401,126644053,126642151,126634051,126631879,126630937,126629471,126622540,126621898,126615462,126611132,126608633,126607973	Gene ID= ENSG00000197763.14 TPM= 2.34 Transcript Type= NA
chr3	126607052	126655155	126607052	126655155	-	ENST00000524230.6@TXNRD3	ENST00000524230.6	protein_coding	126654748,126647236,126646111,126644297,126643981,126642032,126633909,126631764,126630712,126629379,126622464,126621742,126615355,126611037,126608499,126607052	126655155,126647296,126646220,126644401,126644053,126642151,126634051,126631879,126630937,126629471,126622540,126621898,126615462,126611132,126608633,126607973	Gene ID= ENSG00000197763.14 TPM= 8.17 Transcript Type= protein_coding
chr3	126957010	126960406	126957010	126960406	+	ENST00000510044.1@CHCHD6	ENST00000510044.1	protein_coding	126957010,126957416,126960196	126957332,126957551,126960406	Gene ID= ENSG00000159685.10 TPM= 1.17 Transcript Type= processed_transcript
chr3	126952613	126960398	126952613	126960398	+	transcript5350.chr3.nic@CHCHD6	transcript5350.chr3.nic	protein_coding	126952613,126960196	126957551,126960398	Gene ID= ENSG00000159685.10 TPM= 2.34 Transcript Type= NA
chr3	126704220	126960406	126704220	126960406	+	ENST00000290913.7@CHCHD6	ENST00000290913.7	protein_coding	126704220,126727078,126730561,126733078,126852647,126914680,126957416,126960196	126704399,126727186,126730630,126733222,126852730,126914750,126957551,126960406	Gene ID= ENSG00000159685.10 TPM= 17.51 Transcript Type= protein_coding
chr3	126988594	127037392	126988594	127037392	+	ENST00000393409.2@PLXNA1	ENST00000393409.2	protein_coding	126988594,126991384,127003330,127004611,127004885,127005090,127006079,127007799,127011958,127014020,127014182,127014478,127014711,127015184,127016517,127016944,127017425,127017749,127018294,127020202,127022085,127022752,127027940,127028181,127028993,127029440,127029874,127030243,127032387,127032686,127033922	126989787,126991566,127003470,127004711,127005008,127005243,127006178,127007913,127012158,127014116,127014375,127014629,127014831,127015320,127016684,127017037,127017664,127017892,127018528,127020344,127022341,127022818,127028086,127028340,127029096,127029536,127030064,127030412,127032599,127032836,127037392	Gene ID= ENSG00000114554.11 TPM= 145.95 Transcript Type= protein_coding
chr3	127320247	127390717	127320247	127390717	-	transcript5354.chr3.nnic@LINC02016	transcript5354.chr3.nnic	lincRNA	127390446,127385884,127356251,127355865,127324535,127320247	127390717,127386073,127356283,127355940,127324731,127323489	Gene ID= ENSG00000244215.1 TPM= 2.34 Transcript Type= NA
chr3	127384657	127390717	127384657	127390717	-	transcript5356.chr3.nnic@LINC02016	transcript5356.chr3.nnic	lincRNA	127390446,127385884,127384657	127390717,127386073,127385359	Gene ID= ENSG00000244215.1 TPM= 5.84 Transcript Type= NA
chr3	127573069	127591110	127573069	127591110	-	transcript5363.chr3.nnic@TPRA1	transcript5363.chr3.nnic	protein_coding	127590410,127580022,127579740,127576990,127576821,127576617,127575940,127575749,127575403,127575185,127573465,127573069	127591110,127580163,127579872,127577076,127576893,127576696,127576050,127575809,127575505,127575265,127573788,127573321	Gene ID= ENSG00000163870.14 TPM= 4.9 Transcript Type= NA
chr3	127573069	127591110	127573069	127591110	-	transcript5364.chr3.nnic@TPRA1	transcript5364.chr3.nnic	protein_coding	127590410,127580022,127579740,127576990,127576821,127576617,127576185,127575940,127575749,127575403,127575185,127573069	127591110,127580163,127579872,127577076,127576893,127576696,127576255,127576050,127575809,127575505,127575265,127573788	Gene ID= ENSG00000163870.14 TPM= 6.85 Transcript Type= NA
chr3	127573069	127590760	127573069	127590760	-	transcript5366.chr3.nnic@TPRA1	transcript5366.chr3.nnic	protein_coding	127590410,127587984,127580022,127579740,127576990,127576821,127576617,127575940,127575749,127575403,127575185,127573069	127590760,127588160,127580163,127579872,127577076,127576893,127576696,127576050,127575809,127575505,127575265,127573788	Gene ID= ENSG00000163870.14 TPM= 14.99 Transcript Type= NA
chr3	127573069	127591123	127573069	127591123	-	transcript5373.chr3.nic@TPRA1	transcript5373.chr3.nic	protein_coding	127590883,127580022,127579740,127576990,127576821,127576617,127575940,127575749,127575403,127575185,127573069	127591123,127580163,127579872,127577076,127576893,127576696,127576050,127575809,127575505,127575265,127573788	Gene ID= ENSG00000163870.14 TPM= 22 Transcript Type= NA
chr3	127573087	127590769	127573087	127590769	-	ENST00000355552.7@TPRA1	ENST00000355552.7	protein_coding	127590410,127580022,127579740,127576990,127576821,127576617,127575940,127575749,127575403,127575185,127573087	127590769,127580163,127579872,127577076,127576893,127576696,127576050,127575809,127575505,127575265,127573788	Gene ID= ENSG00000163870.14 TPM= 95.09 Transcript Type= protein_coding
chr3	127573093	127590734	127573093	127590734	-	ENST00000393400.6@TPRA1	ENST00000393400.6	protein_coding	127590410,127580022,127579740,127576990,127576821,127576617,127575940,127575403,127575185,127573093	127590734,127580163,127579872,127577076,127576893,127576696,127576050,127575505,127575265,127573788	Gene ID= ENSG00000163870.14 TPM= 8.3 Transcript Type= nonsense_mediated_decay
chr3	127598223	127622436	127598223	127622436	+	ENST00000265056.11@MCM2	ENST00000265056.11	protein_coding	127598223,127599318,127604608,127604896,127606118,127606610,127608382,127608832,127615862,127616868,127617279,127617969,127619027,127620698,127621073,127621663	127598472,127599547,127604783,127605156,127606337,127606817,127608516,127609023,127615955,127617118,127617405,127618081,127619278,127620880,127621228,127622436	Gene ID= ENSG00000073111.13 TPM= 12.84 Transcript Type= protein_coding
chr3	127629157	127672797	127629157	127672797	+	transcript5407.chr3.nic@PODXL2	transcript5407.chr3.nic	protein_coding	127629157,127639245,127660378,127662237,127668441,127669141,127671434	127629289,127639523,127661159,127662311,127668597,127669202,127672797	Gene ID= ENSG00000114631.10 TPM= 2.34 Transcript Type= NA
chr3	127629181	127672809	127629181	127672809	+	ENST00000342480.6@PODXL2	ENST00000342480.6	protein_coding	127629181,127639245,127660378,127662237,127668441,127669141,127671434,127672268	127629289,127639523,127661159,127662311,127668597,127669202,127671613,127672809	Gene ID= ENSG00000114631.10 TPM= 32.69 Transcript Type= protein_coding
chr3	127672942	127680913	127672942	127680913	+	transcript5420.chr3.nic@ABTB1	transcript5420.chr3.nic	protein_coding	127672942,127674345,127674545,127675970,127676272,127676536,127676967,127677168,127677465,127677676,127679985,127680269	127673081,127674453,127674600,127676114,127676431,127676581,127677083,127677286,127677563,127677843,127680185,127680913	Gene ID= ENSG00000114626.17 TPM= 6.42 Transcript Type= NA
chr3	127672923	127680913	127672923	127680913	+	transcript5426.chr3.nic@ABTB1	transcript5426.chr3.nic	protein_coding	127672923,127674391,127674545,127675970,127676272,127676536,127676967,127677168,127677465,127679985,127680269	127673081,127674453,127674600,127676114,127676431,127676581,127677083,127677286,127677843,127680185,127680913	Gene ID= ENSG00000114626.17 TPM= 3.99 Transcript Type= NA
chr3	127672923	127680913	127672923	127680913	+	transcript5427.chr3.nic@ABTB1	transcript5427.chr3.nic	protein_coding	127672923,127674391,127674545,127675970,127676272,127676536,127676967,127677465,127677676,127679985,127680269	127673081,127674453,127674600,127676114,127676431,127676581,127677286,127677563,127677843,127680185,127680913	Gene ID= ENSG00000114626.17 TPM= 5.55 Transcript Type= NA
chr3	127672940	127680917	127672940	127680917	+	ENST00000232744.12@ABTB1	ENST00000232744.12	protein_coding	127672940,127674391,127674545,127675970,127676272,127676536,127676967,127677168,127677465,127677676,127679985,127680269	127673081,127674453,127674600,127676114,127676431,127676581,127677083,127677286,127677563,127677843,127680185,127680917	Gene ID= ENSG00000114626.17 TPM= 48.46 Transcript Type= protein_coding
chr3	127672958	127680920	127672958	127680920	+	ENST00000475042.5@ABTB1	ENST00000475042.5	protein_coding	127672958,127674391,127674545,127675970,127676272,127676536,127676967,127677168,127677465,127677676,127679985,127680269	127673081,127674418,127674600,127676114,127676431,127676581,127677083,127677286,127677563,127677843,127680185,127680920	Gene ID= ENSG00000114626.17 TPM= 23.26 Transcript Type= nonsense_mediated_decay
chr3	127672958	127680920	127672958	127680920	+	ENST00000453791.6@ABTB1	ENST00000453791.6	protein_coding	127672958,127674345,127674545,127675970,127676272,127676536,127676967,127677168,127677465,127677676,127679985,127680269	127673081,127674418,127674600,127676114,127676431,127676581,127677083,127677286,127677563,127677843,127680185,127680920	Gene ID= ENSG00000114626.17 TPM= 13.92 Transcript Type= protein_coding
chr3	127692111	127822927	127692111	127822927	-	transcript5450.chr3.nic@MGLL	transcript5450.chr3.nic	protein_coding	127822309,127821694,127781789,127722430,127721053,127715853,127710576,127694975,127692111	127822927,127821838,127781895,127722566,127721163,127715930,127710665,127695190,127692323	Gene ID= ENSG00000074416.13 TPM= 9.34 Transcript Type= NA
chr3	127689066	127823185	127689066	127823185	-	ENST00000434178.6@MGLL	ENST00000434178.6	protein_coding	127822309,127821694,127781789,127722430,127721053,127710576,127694975,127689066	127823185,127821838,127781895,127722566,127721163,127710665,127695190,127692323	Gene ID= ENSG00000074416.13 TPM= 86.31 Transcript Type= protein_coding
chr3	127689062	127823250	127689062	127823250	-	ENST00000398104.5@MGLL	ENST00000398104.5	protein_coding	127823084,127821694,127781789,127722430,127721053,127710576,127694975,127689062	127823250,127821838,127781895,127722566,127721163,127710665,127695190,127692323	Gene ID= ENSG00000074416.13 TPM= 103.82 Transcript Type= protein_coding
chr3	127698600	127701231	127698600	127701231	+	transcript5477.chr3.nnic@NA	transcript5477.chr3.nnic	NA	127698600	127701231	Gene ID= novel_gene_chr3_5478 TPM= 4.67 Transcript Type= NA
chr3	127711730	127714247	127711730	127714247	-	transcript5479.chr3.nnic@NA	transcript5479.chr3.nnic	NA	127711730	127714247	Gene ID= novel_gene_chr3_5480 TPM= 2.34 Transcript Type= NA
chr3	128052287	128071683	128052287	128071683	+	transcript5495.chr3.nic@SEC61A1	transcript5495.chr3.nic	protein_coding	128052287,128055516,128055673,128056709,128060102,128060508,128064877,128066954,128067421,128067983,128069476	128052559,128055581,128055751,128056840,128060211,128060661,128065037,128067151,128067612,128068059,128071683	Gene ID= ENSG00000058262.9 TPM= 113.06 Transcript Type= NA
chr3	128052369	128071682	128052369	128071682	+	ENST00000243253.7@SEC61A1	ENST00000243253.7	protein_coding	128052369,128052835,128055516,128055673,128056709,128060102,128060508,128064877,128066954,128067421,128067983,128069476	128052559,128052902,128055581,128055751,128056840,128060211,128060661,128065037,128067151,128067612,128068059,128071682	Gene ID= ENSG00000058262.9 TPM= 649.57 Transcript Type= protein_coding
chr3	128080960	128123824	128080960	128123824	-	ENST00000322623.9@RUVBL1	ENST00000322623.9	protein_coding	128123584,128119328,128112888,128104773,128101559,128100595,128098882,128097300,128087706,128082483,128080960	128123824,128119414,128113020,128104924,128101648,128100744,128098945,128097498,128087808,128082574,128081409	Gene ID= ENSG00000175792.11 TPM= 24.52 Transcript Type= protein_coding
chr3	128153483	128427040	128153483	128427040	+	transcript5508.chr3.nnic@EEFSEC	transcript5508.chr3.nnic	protein_coding	128153483,128246836,128262128,128264617,128341233,128358217,128426063	128153823,128247043,128262224,128264781,128341889,128358373,128427040	Gene ID= ENSG00000132394.10 TPM= 2.34 Transcript Type= NA
chr3	128153487	128408642	128153487	128408642	+	transcript5509.chr3.nic@EEFSEC	transcript5509.chr3.nic	protein_coding	128153487,128246836,128262128,128264617,128341233,128408069	128153823,128247043,128262224,128264781,128341889,128408642	Gene ID= ENSG00000132394.10 TPM= 2.34 Transcript Type= NA
chr3	128153478	128408646	128153478	128408646	+	transcript5510.chr3.nic@EEFSEC	transcript5510.chr3.nic	protein_coding	128153478,128246836,128262128,128341233,128358217,128408069	128153823,128247043,128262224,128341889,128358373,128408646	Gene ID= ENSG00000132394.10 TPM= 7.01 Transcript Type= NA
chr3	128340683	128408646	128340683	128408646	+	transcript5512.chr3.nnic@EEFSEC	transcript5512.chr3.nnic	protein_coding	128340683,128341233,128358217,128408069	128341138,128341889,128358373,128408646	Gene ID= ENSG00000132394.10 TPM= 2.34 Transcript Type= NA
chr3	128153454	128408646	128153454	128408646	+	ENST00000254730.10@EEFSEC	ENST00000254730.10	protein_coding	128153454,128246836,128262128,128264617,128341233,128358217,128408069	128153823,128247043,128262224,128264781,128341889,128358373,128408646	Gene ID= ENSG00000132394.10 TPM= 43.2 Transcript Type= protein_coding
chr3	128479427	128487932	128479427	128487932	-	transcript5521.chr3.nic@GATA2	transcript5521.chr3.nic	protein_coding	128487711,128486803,128485727,128483860,128481819,128479427	128487932,128487076,128486368,128484005,128481944,128481318	Gene ID= ENSG00000179348.11 TPM= 120.36 Transcript Type= NA
chr3	128479427	128493185	128479427	128493185	-	ENST00000341105.6@GATA2	ENST00000341105.6	protein_coding	128492899,128486803,128485727,128483860,128481819,128479427	128493185,128487076,128486368,128484005,128481944,128481318	Gene ID= ENSG00000179348.11 TPM= 237.31 Transcript Type= protein_coding
chr3	128489222	128501952	128489222	128501952	+	transcript5532.chr3.nnic@GATA2-AS1	transcript5532.chr3.nnic	antisense_RNA	128489222,128489779,128499540,128501609	128489670,128490069,128499661,128501952	Gene ID= ENSG00000244300.2 TPM= 2.34 Transcript Type= NA
chr3	128489222	128503215	128489222	128503215	+	transcript5543.chr3.nic@GATA2-AS1	transcript5543.chr3.nic	antisense_RNA	128489222,128489779,128501609	128489670,128490069,128503215	Gene ID= ENSG00000244300.2 TPM= 5.84 Transcript Type= NA
chr3	128489222	128516514	128489222	128516514	+	transcript5545.chr3.nnic@GATA2-AS1	transcript5545.chr3.nnic	antisense_RNA	128489222,128489779,128515806	128489670,128490069,128516514	Gene ID= ENSG00000244300.2 TPM= 2.34 Transcript Type= NA
chr3	128489247	128501943	128489247	128501943	+	transcript5550.chr3.nic@GATA2-AS1	transcript5550.chr3.nic	antisense_RNA	128489247,128489779,128501609	128489415,128490069,128501943	Gene ID= ENSG00000244300.2 TPM= 2.34 Transcript Type= NA
chr3	128489247	128541823	128489247	128541823	+	transcript5554.chr3.nnic@GATA2-AS1	transcript5554.chr3.nnic	antisense_RNA	128489247,128489779,128538012	128489415,128490069,128541823	Gene ID= ENSG00000244300.2 TPM= 3.5 Transcript Type= NA
chr3	128489232	128502348	128489232	128502348	+	ENST00000468377.1@GATA2-AS1	ENST00000468377.1	antisense_RNA	128489232,128501609	128490069,128502348	Gene ID= ENSG00000244300.2 TPM= 2.34 Transcript Type= antisense_RNA
chr3	128506757	128510593	128506757	128510593	+	transcript5562.chr3.nnic@NA	transcript5562.chr3.nnic	NA	128506757	128510593	Gene ID= novel_gene_chr3_5563 TPM= 14.01 Transcript Type= NA
chr3	128619970	128650849	128619970	128650849	-	ENST00000296255.7@RPN1	ENST00000296255.7	protein_coding	128650540,128644919,128637799,128631948,128629951,128626733,128625874,128625534,128622164,128619970	128650849,128644983,128638105,128632157,128630143,128626832,128626012,128625653,128622409,128620593	Gene ID= ENSG00000163902.11 TPM= 618.82 Transcript Type= protein_coding
chr3	128726122	128814796	128726122	128814796	+	ENST00000265062.7@RAB7A	ENST00000265062.7	protein_coding	128726122,128795360,128797943,128806372,128807543,128813327	128726359,128795420,128798069,128806590,128807671,128814796	Gene ID= ENSG00000075785.12 TPM= 447.77 Transcript Type= protein_coding
chr3	128879601	128913100	128879601	128913100	+	transcript5594.chr3.nnic@ACAD9	transcript5594.chr3.nnic	protein_coding	128879601,128884653,128893555,128895310,128896436,128897632,128899287,128901276,128902553,128904062,128904386,128906121,128908185,128908973,128909344,128910021,128910391,128910741,128912507	128879841,128884746,128893656,128895416,128896536,128897710,128899461,128901349,128902628,128904132,128904505,128906249,128908264,128909099,128909421,128910149,128910539,128910813,128913100	Gene ID= ENSG00000177646.18 TPM= 2.34 Transcript Type= NA
chr3	128879611	128913114	128879611	128913114	+	ENST00000308982.11@ACAD9	ENST00000308982.11	protein_coding	128879611,128884653,128893555,128895310,128896436,128897632,128899287,128901276,128902553,128904062,128904386,128906121,128908185,128908973,128909344,128910021,128910741,128912507	128879841,128884746,128893656,128895416,128896536,128897710,128899461,128901349,128902628,128904132,128904505,128906249,128908264,128909099,128909421,128910149,128910813,128913114	Gene ID= ENSG00000177646.18 TPM= 24.52 Transcript Type= protein_coding
chr3	128880550	128883514	128880550	128883514	-	transcript5606.chr3.nnic@NA	transcript5606.chr3.nnic	NA	128880550	128883514	Gene ID= novel_gene_chr3_5607 TPM= 9.34 Transcript Type= NA
chr3	128883075	128885542	128883075	128885542	-	transcript5604.chr3.nnic@NA	transcript5604.chr3.nnic	NA	128883075	128885542	Gene ID= novel_gene_chr3_5605 TPM= 5.84 Transcript Type= NA
chr3	129001616	129040742	129001616	129040742	+	transcript5608.chr3.nnic@EFCC1	transcript5608.chr3.nnic	protein_coding	129001616,129003794,129006362,129007426,129030703,129032819,129034164,129036977,129038831,129039712	129002324,129004077,129006478,129007607,129030860,129032966,129034329,129037117,129038900,129040742	Gene ID= ENSG00000114654.7 TPM= 2.92 Transcript Type= NA
chr3	129003605	129040742	129003605	129040742	+	transcript5616.chr3.nnic@EFCC1	transcript5616.chr3.nnic	protein_coding	129003605,129030703,129032819,129034164,129036977,129038831,129039712	129004077,129030860,129032966,129034329,129037117,129038900,129040742	Gene ID= ENSG00000114654.7 TPM= 2.92 Transcript Type= NA
chr3	129001629	129040742	129001629	129040742	+	ENST00000436022.2@EFCC1	ENST00000436022.2	protein_coding	129001629,129003794,129030703,129032822,129034164,129036977,129038831,129039712	129002324,129004077,129030860,129032966,129034329,129037117,129038900,129040742	Gene ID= ENSG00000114654.7 TPM= 16.35 Transcript Type= protein_coding
chr3	129087569	129121804	129087569	129121804	-	ENST00000393304.5@RAB43	ENST00000393304.5	protein_coding	129121744,129121286,129094986,129087569	129121804,129121492,129095169,129091346	Gene ID= ENSG00000172780.16 TPM= 27.64 Transcript Type= protein_coding
chr3	129087569	129122014	129087569	129122014	-	ENST00000393307.5@RAB43	ENST00000393307.5	protein_coding	129121981,129121286,129094986,129087569	129122014,129121492,129095169,129091346	Gene ID= ENSG00000172780.16 TPM= 26.47 Transcript Type= protein_coding
chr3	129087569	129121790	129087569	129121790	-	ENST00000315150.9@RAB43	ENST00000315150.9	protein_coding	129121286,129094986,129087569	129121790,129095169,129091346	Gene ID= ENSG00000172780.16 TPM= 52.16 Transcript Type= protein_coding
chr3	129127415	129161293	129127415	129161293	-	ENST00000393295.7@ISY1	ENST00000393295.7	protein_coding	129160973,129159154,129158508,129156855,129156633,129145761,129140368,129134832,129134074,129130550,129127415	129161293,129159176,129158559,129156920,129156675,129145873,129140485,129134954,129134195,129130636,129130188	Gene ID= ENSG00000240682.9 TPM= 4.67 Transcript Type= protein_coding
chr3	129129374	129161080	129129374	129161080	-	transcript5639.chr3.nic@ISY1	transcript5639.chr3.nic	protein_coding	129160973,129159154,129158508,129156855,129156633,129145761,129140368,129130550,129129374	129161080,129159176,129158559,129156920,129156675,129145873,129140485,129130636,129130188	Gene ID= ENSG00000240682.9 TPM= 2.34 Transcript Type= NA
chr3	129169487	129183899	129169487	129183899	-	ENST00000446936.6@CNBP	ENST00000446936.6	protein_coding	129183776,129171655,129171446,129171079,129169487	129183899,129171771,129171538,129171283,129170570	Gene ID= ENSG00000169714.16 TPM= 3.3 Transcript Type= protein_coding
chr3	129169487	129183899	129169487	129183899	-	ENST00000451728.6@CNBP	ENST00000451728.6	protein_coding	129183776,129171634,129171446,129171079,129169487	129183899,129171771,129171538,129171280,129170570	Gene ID= ENSG00000169714.16 TPM= 4.47 Transcript Type= protein_coding
chr3	129169569	129183922	129169569	129183922	-	ENST00000504813.5@CNBP	ENST00000504813.5	protein_coding	129183776,129171634,129171446,129171079,129169569	129183922,129171771,129171508,129171277,129170570	Gene ID= ENSG00000169714.16 TPM= 225.73 Transcript Type= protein_coding
chr3	129169569	129183910	129169569	129183910	-	ENST00000500450.6@CNBP	ENST00000500450.6	protein_coding	129183776,129171655,129171446,129171079,129169569	129183910,129171771,129171508,129171277,129170570	Gene ID= ENSG00000169714.16 TPM= 2.72 Transcript Type= protein_coding
chr3	129180764	129183929	129180764	129183929	-	transcript5657.chr3.nnic@NA	transcript5657.chr3.nnic	NA	129180764	129183929	Gene ID= novel_gene_chr3_5658 TPM= 3.5 Transcript Type= NA
chr3	129182044	129183033	129182044	129183033	+	transcript5655.chr3.nnic@NA	transcript5655.chr3.nnic	NA	129182044	129183033	Gene ID= novel_gene_chr3_5656 TPM= 3.5 Transcript Type= NA
chr3	129249606	129277773	129249606	129277773	+	ENST00000314797.10@COPG1	ENST00000314797.10	protein_coding	129249606,129250682,129252281,129252623,129252876,129254668,129254985,129256068,129257470,129257727,129260333,129260619,129263904,129265549,129267024,129267937,129268495,129268932,129271767,129272244,129272807,129274838,129275194,129277294	129249746,129250734,129252361,129252694,129252955,129254743,129255077,129256154,129257627,129257860,129260400,129260807,129263999,129265792,129267099,129268040,129268620,129269000,129271909,129272415,129272904,129274976,129275292,129277773	Gene ID= ENSG00000181789.14 TPM= 400.34 Transcript Type= protein_coding
chr3	129278840	129306186	129278840	129306186	+	ENST00000383463.8@HMCES	ENST00000383463.8	protein_coding	129278840,129279710,129288854,129290679,129298354,129301950,129304589	129278905,129279915,129288997,129290804,129298535,129302142,129306186	Gene ID= ENSG00000183624.13 TPM= 14.01 Transcript Type= protein_coding
chr3	129278846	129305293	129278846	129305293	+	ENST00000417226.6@HMCES	ENST00000417226.6	protein_coding	129278846,129279710,129288854,129298354,129301950,129304589	129278905,129279915,129288997,129298535,129302142,129305293	Gene ID= ENSG00000183624.13 TPM= 1.75 Transcript Type= protein_coding
chr3	129278974	129305262	129278974	129305262	+	ENST00000389735.7@HMCES	ENST00000389735.7	protein_coding	129278974,129279710,129288854,129290679,129298354,129301950,129304589	129279211,129279915,129288997,129290804,129298535,129302142,129305262	Gene ID= ENSG00000183624.13 TPM= 19.27 Transcript Type= protein_coding
chr3	129314771	129316277	129314771	129316277	-	ENST00000333762.5@H1FX	ENST00000333762.5	protein_coding	129314771	129316277	Gene ID= ENSG00000184897.5 TPM= 114.42 Transcript Type= protein_coding
chr3	129362012	129365468	129362012	129365468	+	transcript5711.chr3.nnic@NA	transcript5711.chr3.nnic	NA	129362012	129365468	Gene ID= novel_gene_chr3_5712 TPM= 3.5 Transcript Type= NA
chr3	129391150	129399434	129391150	129399434	-	transcript5753.chr3.nic@RPL32P3	transcript5753.chr3.nic	transcribed_unprocessed_pseudogene	129399008,129397040,129396217,129391150	129399434,129397140,129396420,129393795	Gene ID= ENSG00000251474.6 TPM= 2.34 Transcript Type= NA
chr3	129431266	129440029	129431266	129440029	-	transcript5740.chr3.nic@MBD4	transcript5740.chr3.nic	protein_coding	129439730,129437720,129436461,129434062,129433850,129433098,129432556,129431266	129440029,129437950,129437308,129434136,129433984,129433247,129432606,129431578	Gene ID= ENSG00000129071.9 TPM= 3.5 Transcript Type= NA
chr3	129430947	129439938	129430947	129439938	-	transcript5743.chr3.nic@MBD4	transcript5743.chr3.nic	protein_coding	129439730,129437720,129436461,129434062,129433850,129433098,129430947	129439938,129437950,129437308,129434136,129433984,129433247,129432606	Gene ID= ENSG00000129071.9 TPM= 2.72 Transcript Type= NA
chr3	129430944	129440029	129430944	129440029	-	ENST00000429544.6@MBD4	ENST00000429544.6	protein_coding	129439730,129437720,129436461,129434062,129433850,129433098,129432503,129430944	129440029,129437950,129437308,129434136,129433984,129433247,129432606,129431578	Gene ID= ENSG00000129071.9 TPM= 6.22 Transcript Type= protein_coding
chr3	129430950	129440009	129430950	129440009	-	ENST00000249910.5@MBD4	ENST00000249910.5	protein_coding	129439730,129437720,129436443,129434062,129433850,129433098,129432503,129430950	129440009,129437950,129437308,129434136,129433984,129433247,129432606,129431578	Gene ID= ENSG00000129071.9 TPM= 3.89 Transcript Type= protein_coding
chr3	129431266	129440007	129431266	129440007	-	ENST00000503197.5@MBD4	ENST00000503197.5	protein_coding	129439730,129437720,129436443,129434062,129433850,129433098,129432556,129431266	129440007,129437950,129437308,129434136,129433984,129433247,129432606,129431578	Gene ID= ENSG00000129071.9 TPM= 4.67 Transcript Type= protein_coding
chr3	129440319	129520347	129440319	129520347	+	transcript5717.chr3.nic@IFT122	transcript5717.chr3.nic	protein_coding	129440319,129449871,129451914,129456114,129458599,129461228,129463560,129464635,129469342,129476315,129476663,129478016,129479785,129481530,129483485,129488257,129495446,129499902,129502711,129504319,129506409,129507668,129512312,129514389,129515488,129517469,129519107,129519568,129520176	129440371,129449937,129451998,129456264,129458677,129461304,129463626,129464781,129469417,129476506,129476801,129478218,129479922,129481694,129483682,129488397,129495607,129500068,129502882,129504421,129506549,129507762,129512412,129514554,129515599,129517594,129519186,129519732,129520347	Gene ID= ENSG00000163913.11 TPM= 3.12 Transcript Type= NA
chr3	129440099	129520347	129440099	129520347	+	transcript5721.chr3.nic@IFT122	transcript5721.chr3.nic	protein_coding	129440099,129449871,129451914,129458599,129461228,129463560,129464635,129469342,129476315,129476663,129478016,129479785,129481530,129483485,129488257,129495446,129499902,129502711,129504319,129506409,129507668,129512312,129514389,129515488,129517469,129519107,129519568,129520176	129440371,129449937,129451998,129458677,129461304,129463626,129464781,129469417,129476506,129476801,129478218,129479922,129481694,129483682,129488397,129495607,129500068,129502882,129504421,129506549,129507762,129512412,129514554,129515599,129517594,129519186,129519732,129520347	Gene ID= ENSG00000163913.11 TPM= 5.45 Transcript Type= NA
chr3	129440125	129520351	129440125	129520351	+	ENST00000347300.6@IFT122	ENST00000347300.6	protein_coding	129440125,129449871,129451914,129458599,129461228,129463560,129464635,129469342,129476315,129476663,129478016,129479785,129481530,129483485,129488257,129492141,129495446,129499902,129502711,129504319,129506409,129507668,129512312,129514389,129515488,129517469,129519107,129519568,129520176	129440371,129449937,129451998,129458677,129461304,129463626,129464781,129469417,129476506,129476801,129478218,129479922,129481694,129483682,129488397,129492194,129495607,129500068,129502882,129504421,129506549,129507762,129512412,129514554,129515599,129517594,129519186,129519732,129520351	Gene ID= ENSG00000163913.11 TPM= 26.47 Transcript Type= protein_coding
chr3	129555175	129606818	129555175	129606818	-	ENST00000324093.8@PLXND1	ENST00000324093.8	protein_coding	129605329,129589351,129586588,129586172,129585952,129584385,129584125,129583567,129578329,129575766,129575469,129574336,129573594,129572842,129572609,129571677,129571509,129571040,129570786,129569843,129567698,129567492,129566527,129565887,129565340,129563094,129562787,129561800,129561646,129560689,129560330,129559620,129558428,129557083,129556617,129555175	129606818,129589527,129586719,129586272,129586081,129584562,129584233,129583669,129578433,129575855,129575562,129574490,129573745,129572941,129572748,129571844,129571599,129571303,129570935,129569957,129567805,129567604,129566631,129566017,129565538,129563240,129562943,129561903,129561709,129560723,129560434,129559783,129558575,129557223,129556691,129556428	Gene ID= ENSG00000004399.12 TPM= 187.98 Transcript Type= protein_coding
chr3	129568558	129572831	129568558	129572831	-	transcript5761.chr3.nnic@NA	transcript5761.chr3.nnic	NA	129568558	129572831	Gene ID= novel_gene_chr3_5762 TPM= 2.34 Transcript Type= NA
chr3	129648691	129795022	129648691	129795022	-	transcript5775.chr3.nnic@TMCC1	transcript5775.chr3.nnic	protein_coding	129794324,129670330,129654968,129648691	129795022,129671264,129655103,129651795	Gene ID= ENSG00000172765.16 TPM= 7.01 Transcript Type= NA
chr3	129847309	129893737	129847309	129893737	-	transcript5777.chr3.nnic@TMCC1	transcript5777.chr3.nnic	protein_coding	129893494,129880309,129860940,129847309	129893737,129880559,129861012,129848412	Gene ID= ENSG00000172765.16 TPM= 2.34 Transcript Type= NA
chr3	129847051	129893737	129847051	129893737	-	transcript5779.chr3.nnic@TMCC1	transcript5779.chr3.nnic	protein_coding	129893494,129880309,129847051	129893737,129880559,129848412	Gene ID= ENSG00000172765.16 TPM= 7.01 Transcript Type= NA
chr3	130560334	130678155	130560334	130678155	+	ENST00000358511.10@COL6A6	ENST00000358511.10	protein_coding	130560334,130563068,130564994,130566702,130568047,130570818,130573956,130581561,130581990,130586506,130589090,130591041,130592541,130592696,130593061,130593199,130594281,130598365,130599757,130606931,130608902,130610649,130621821,130626485,130627319,130634590,130635699,130641652,130642832,130642987,130644991,130649069,130658676,130661637,130665003,130675202	130560428,130563664,130565614,130567262,130568604,130571393,130574525,130581904,130582068,130586660,130589182,130591094,130592612,130592722,130593105,130593252,130594343,130598430,130599810,130606966,130608964,130610711,130621883,130626547,130627369,130634625,130635761,130641714,130642867,130643023,130645002,130649562,130658772,130662308,130665096,130678155	Gene ID= ENSG00000206384.10 TPM= 4.67 Transcript Type= protein_coding
chr3	130678935	130746829	130678935	130746829	-	transcript5789.chr3.nnic@PIK3R4	transcript5789.chr3.nnic	protein_coding	130746318,130744486,130735869,130733548,130731608,130730308,130728463,130723414,130718389,130716396,130708291,130706948,130705561,130703723,130690490,130686211,130684250,130681491,130680977,130680613,130678935	130746829,130745264,130736002,130734130,130731734,130730442,130728684,130723587,130718534,130716599,130708492,130707135,130705771,130703888,130690654,130686422,130684381,130681591,130681065,130680721,130679485	Gene ID= ENSG00000196455.7 TPM= 4.09 Transcript Type= NA
chr3	130678935	130746829	130678935	130746829	-	ENST00000356763.7@PIK3R4	ENST00000356763.7	protein_coding	130746318,130744486,130735869,130733548,130730308,130728463,130723414,130718389,130716396,130708291,130706948,130705561,130703723,130690490,130686211,130684250,130681491,130680977,130680613,130678935	130746829,130745264,130736002,130734130,130730442,130728684,130723587,130718534,130716599,130708492,130707135,130705771,130703888,130690654,130686422,130684381,130681591,130681065,130680721,130679485	Gene ID= ENSG00000196455.7 TPM= 22.77 Transcript Type= protein_coding
chr3	130850601	131016684	130850601	131016684	+	ENST00000507488.6@ATP2C1	ENST00000507488.6	protein_coding	130850601,130930416,130932022,130934622,130937428,130940630,130941591,130953821,130955012,130956104,130959275,130963971,130964948,130967145,130967330,130969292,130975332,130979249,130980582,130992951,130993932,130996043,130996680,130997606,130998294,130999518,131001220,131016152	130850928,130930526,130932138,130934711,130937463,130940691,130941699,130953976,130955080,130956179,130959341,130964095,130965045,130967240,130967419,130969396,130975488,130979419,130980679,130993001,130994098,130996111,130996796,130997753,130998389,130999659,131001314,131016684	Gene ID= ENSG00000017260.19 TPM= 3.6 Transcript Type= protein_coding
chr3	130893959	131016684	130893959	131016684	+	transcript5810.chr3.nic@ATP2C1	transcript5810.chr3.nic	protein_coding	130893959,130930416,130932022,130934622,130937428,130940630,130941591,130953821,130955012,130956104,130959275,130963971,130964948,130967145,130967330,130969292,130975332,130979249,130980582,130992951,130993932,130996043,130996680,130997606,130998294,130999518,131001220,131016152	130894337,130930526,130932138,130934711,130937463,130940691,130941699,130953976,130955080,130956179,130959341,130964095,130965045,130967240,130967419,130969396,130975488,130979419,130980679,130993001,130994098,130996111,130996796,130997753,130998389,130999659,131001344,131016684	Gene ID= ENSG00000017260.19 TPM= 8.85 Transcript Type= NA
chr3	130893968	131003107	130893968	131003107	+	ENST00000510168.5@ATP2C1	ENST00000510168.5	protein_coding	130893968,130894590,130930416,130932022,130934622,130937428,130940630,130941591,130953821,130955012,130956104,130959275,130963971,130964948,130967145,130967330,130969292,130975332,130979249,130980582,130992951,130993932,130996043,130996680,130997606,130998294,130999518,131001220	130894337,130894775,130930526,130932138,130934711,130937463,130940691,130941699,130953976,130955080,130956179,130959341,130964095,130965045,130967240,130967419,130969396,130975488,130979419,130980679,130993001,130994098,130996111,130996796,130997753,130998389,130999659,131003107	Gene ID= ENSG00000017260.19 TPM= 21.11 Transcript Type= protein_coding
chr3	130850595	131003150	130850595	131003150	+	ENST00000505330.5@ATP2C1	ENST00000505330.5	protein_coding	130850595,130930416,130932022,130934622,130937428,130940630,130941591,130953821,130955012,130956104,130959275,130963971,130964948,130967145,130967330,130969292,130975332,130979249,130980582,130992951,130993932,130996043,130996680,130997606,130998294,130999518,131001220	130850928,130930526,130932138,130934711,130937463,130940691,130941699,130953976,130955080,130956179,130959341,130964095,130965045,130967240,130967419,130969396,130975488,130979419,130980679,130993001,130994098,130996111,130996796,130997753,130998389,130999659,131003150	Gene ID= ENSG00000017260.19 TPM= 5.93 Transcript Type= protein_coding
chr3	130893991	131003150	130893991	131003150	+	ENST00000508532.5@ATP2C1	ENST00000508532.5	protein_coding	130893991,130894708,130930416,130932022,130934622,130937428,130940630,130941591,130953821,130955012,130956104,130959275,130963971,130964948,130967145,130967330,130969292,130975332,130979249,130980582,130992951,130993932,130996043,130996680,130997606,130998294,130999518,131001220	130894337,130894775,130930526,130932138,130934711,130937463,130940691,130941699,130953976,130955080,130956179,130959341,130964095,130965045,130967240,130967419,130969396,130975488,130979419,130980679,130993001,130994098,130996111,130996796,130997753,130998389,130999659,131003150	Gene ID= ENSG00000017260.19 TPM= 3.6 Transcript Type= protein_coding
chr3	130894178	131003150	130894178	131003150	+	ENST00000504948.5@ATP2C1	ENST00000504948.5	protein_coding	130894178,130930416,130932022,130934622,130937428,130940630,130941591,130953821,130955012,130956104,130959275,130963971,130964948,130967145,130967330,130969292,130975332,130979249,130980582,130992951,130993932,130996043,130996680,130997606,130998294,130999518,131001220	130894337,130930526,130932138,130934711,130937463,130940691,130941699,130953976,130955080,130956179,130959341,130964095,130965045,130967240,130967419,130969396,130975488,130979419,130980679,130993001,130994098,130996111,130996796,130997753,130998389,130999659,131003150	Gene ID= ENSG00000017260.19 TPM= 5.93 Transcript Type= protein_coding
chr3	130862142	130866042	130862142	130866042	-	transcript5869.chr3.nnic@NA	transcript5869.chr3.nnic	NA	130862142	130866042	Gene ID= novel_gene_chr3_5870 TPM= 4.67 Transcript Type= NA
chr3	131023664	131026765	131023664	131026765	-	transcript5867.chr3.nic@ASTE1	transcript5867.chr3.nic	protein_coding	131026507,131025474,131023664	131026765,131025594,131025331	Gene ID= ENSG00000034533.11 TPM= 2.34 Transcript Type= NA
chr3	131013875	131026802	131013875	131026802	-	ENST00000264992.7@ASTE1	ENST00000264992.7	protein_coding	131026507,131025474,131024005,131018506,131016144,131013875	131026802,131025594,131025331,131018716,131016339,131014387	Gene ID= ENSG00000034533.11 TPM= 11.68 Transcript Type= protein_coding
chr3	131361852	131364525	131361852	131364525	+	transcript5879.chr3.nnic@NA	transcript5879.chr3.nnic	NA	131361852	131364525	Gene ID= novel_gene_chr3_5880 TPM= 3.5 Transcript Type= NA
chr3	131361912	131364531	131361912	131364531	+	ENST00000498923.2@NUDT16P1	ENST00000498923.2	transcribed_unitary_pseudogene	131361912,131363356	131362441,131364531	Gene ID= ENSG00000246082.2 TPM= 2.34 Transcript Type= retained_intron
chr3	131361898	131365122	131361898	131365122	+	ENST00000499077.2@NUDT16P1	ENST00000499077.2	transcribed_unitary_pseudogene	131361898,131362172,131363356	131362068,131362441,131365122	Gene ID= ENSG00000246082.2 TPM= 1.17 Transcript Type= processed_transcript
chr3	131381770	131383643	131381770	131383643	+	transcript5895.chr3.nic@NUDT16	transcript5895.chr3.nic	protein_coding	131381770,131383162	131382315,131383643	Gene ID= ENSG00000198585.11 TPM= 2.34 Transcript Type= NA
chr3	131381774	131388830	131381774	131388830	+	ENST00000521288.1@NUDT16	ENST00000521288.1	protein_coding	131381774,131382046,131383162	131381942,131382315,131388830	Gene ID= ENSG00000198585.11 TPM= 5.84 Transcript Type= protein_coding
chr3	131381785	131383439	131381785	131383439	+	ENST00000502852.1@NUDT16	ENST00000502852.1	protein_coding	131381785,131382046	131381942,131383439	Gene ID= ENSG00000198585.11 TPM= 3.5 Transcript Type= protein_coding
chr3	131462212	131502969	131462212	131502969	-	ENST00000264995.7@MRPL3	ENST00000264995.7	protein_coding	131502730,131501531,131500430,131498179,131489981,131487680,131471171,131469696,131468091,131462212	131502969,131501715,131500521,131498277,131490080,131487740,131471279,131469773,131468168,131462875	Gene ID= ENSG00000114686.8 TPM= 23.35 Transcript Type= protein_coding
chr3	132317367	132358752	132317367	132358752	+	ENST00000336375.9@ACPP	ENST00000336375.9	protein_coding	132317367,132328267,132331647,132332192,132337456,132342552,132344927,132349920,132352720,132356686	132317576,132328362,132331733,132332344,132337554,132342644,132345059,132350002,132352823,132358752	Gene ID= ENSG00000014257.15 TPM= 1.17 Transcript Type= protein_coding
chr3	132317407	132368298	132317407	132368298	+	ENST00000351273.11@ACPP	ENST00000351273.11	protein_coding	132317407,132328267,132331647,132332192,132337456,132342552,132344927,132349920,132352720,132356686,132367704	132317576,132328362,132331733,132332344,132337554,132342644,132345059,132350002,132352823,132356855,132368298	Gene ID= ENSG00000014257.15 TPM= 1.17 Transcript Type= protein_coding
chr3	132370125	132371708	132370125	132371708	+	transcript5911.chr3.nnic@NA	transcript5911.chr3.nnic	NA	132370125	132371708	Gene ID= novel_gene_chr3_5912 TPM= 3.5 Transcript Type= NA
chr3	132454315	132458579	132454315	132458579	+	transcript5917.chr3.nic@DNAJC13	transcript5917.chr3.nic	protein_coding	132454315,132456501,132456663	132456401,132456580,132458579	Gene ID= ENSG00000138246.15 TPM= 4.67 Transcript Type= NA
chr3	132417526	132539032	132417526	132539032	+	ENST00000260818.10@DNAJC13	ENST00000260818.10	protein_coding	132417526,132434538,132446475,132447321,132447898,132450647,132453298,132453599,132454066,132456235,132456501,132456663,132457269,132460250,132461050,132462467,132463696,132465995,132466299,132467170,132473145,132474932,132477789,132477981,132479227,132480369,132482226,132483375,132484588,132488298,132488976,132490897,132492414,132494144,132495088,132496528,132499126,132499734,132500794,132502289,132503214,132505302,132507237,132511067,132513008,132514571,132516422,132516704,132522828,132523157,132523540,132525610,132526141,132528189,132530998,132538176	132417760,132434618,132446550,132447470,132447939,132450847,132453504,132453694,132454157,132456401,132456580,132456832,132457368,132460357,132461205,132462523,132463817,132466070,132466394,132467313,132473227,132475085,132477892,132478140,132479289,132480470,132482330,132483577,132484672,132488452,132489021,132491051,132492615,132494259,132495166,132496663,132499310,132499808,132500913,132502468,132503381,132505415,132507353,132511244,132513099,132514670,132516496,132516816,132522997,132523199,132523713,132525789,132526281,132528332,132531097,132539032	Gene ID= ENSG00000138246.15 TPM= 17.51 Transcript Type= protein_coding
chr3	132558142	132605635	132558142	132605635	-	transcript5939.chr3.nic@ACAD11	transcript5939.chr3.nic	protein_coding	132605098,132603229,132579492,132578796,132576944,132575772,132561101,132559833,132558142	132605635,132603327,132579558,132578881,132577015,132575926,132561217,132559942,132559085	Gene ID= ENSG00000240303.7 TPM= 2.34 Transcript Type= NA
chr3	132558138	132659649	132558138	132659649	-	ENST00000496418.5@ACAD11	ENST00000496418.5	protein_coding	132659603,132644797,132642677,132641972,132639492,132631341,132630437,132628340,132626691,132619468,132618634,132605098,132603229,132578796,132576944,132575772,132561101,132559833,132558138	132659649,132644896,132642802,132642133,132639656,132631479,132630558,132628446,132626817,132619545,132618772,132605205,132603327,132579558,132577015,132575926,132561217,132559942,132559085	Gene ID= ENSG00000240303.7 TPM= 4.67 Transcript Type= retained_intron
chr3	132597237	132602215	132597237	132602215	+	ENST00000249887.2@ACKR4	ENST00000249887.2	protein_coding	132597237,132600389	132597323,132602215	Gene ID= ENSG00000129048.6 TPM= 5.84 Transcript Type= protein_coding
chr3	132659466	132677944	132659466	132677944	+	ENST00000356232.8@UBA5	ENST00000356232.8	protein_coding	132659466,132665823,132665984,132668818,132670198,132670965,132671777,132672050,132675248,132675605,132675817,132676443	132660698,132665868,132666073,132668927,132670284,132671049,132671881,132672177,132675383,132675680,132675923,132677944	Gene ID= ENSG00000081307.12 TPM= 2.34 Transcript Type= protein_coding
chr3	132659946	132677189	132659946	132677189	+	ENST00000493720.6@UBA5	ENST00000493720.6	protein_coding	132659946,132665823,132665984,132668818,132670198,132670965,132671777,132672050,132675248,132675605,132675817,132676855	132660698,132665868,132666073,132668927,132670284,132671049,132671881,132672177,132675383,132675680,132675923,132677189	Gene ID= ENSG00000081307.12 TPM= 3.5 Transcript Type= protein_coding
chr3	132681259	132722239	132681259	132722239	-	transcript5951.chr3.nic@NPHP3-ACAD11	transcript5951.chr3.nic	protein_coding	132721963,132719705,132718994,132716757,132715085,132713126,132708101,132705740,132704198,132701430,132700334,132699918,132694827,132692654,132691192,132690528,132689074,132688650,132687151,132686260,132684554,132683399,132682703,132681259	132722239,132719830,132719144,132716909,132715218,132713286,132708257,132705814,132704371,132701533,132700448,132700061,132697362,132692818,132691286,132690650,132689263,132688891,132687226,132686387,132684794,132683524,132682818,132682090	Gene ID= ENSG00000274810.4 TPM= 2.34 Transcript Type= NA
chr3	132717753	132722429	132717753	132722429	-	transcript5956.chr3.nic@NPHP3-ACAD11	transcript5956.chr3.nic	protein_coding	132721963,132719705,132717753	132722429,132719830,132719144	Gene ID= ENSG00000274810.4 TPM= 9.34 Transcript Type= NA
chr3	133038359	133396192	133038359	133396192	+	transcript5964.chr3.nic@TMEM108	transcript5964.chr3.nic	protein_coding	133038359,133045902,133229266,133390180,133395864	133038435,133046020,133229351,133390334,133396192	Gene ID= ENSG00000144868.13 TPM= 2.34 Transcript Type= NA
chr3	133038402	133396228	133038402	133396228	+	ENST00000393130.7@TMEM108	ENST00000393130.7	protein_coding	133038402,133045902,133229270,133379752,133390180,133395864	133038435,133046020,133229351,133381161,133390334,133396228	Gene ID= ENSG00000144868.13 TPM= 15.18 Transcript Type= protein_coding
chr3	133573664	133590258	133573664	133590258	+	transcript5970.chr3.nic@CDV3	transcript5970.chr3.nic	protein_coding	133573664,133575039,133584002,133586563,133588353	133574284,133575115,133584150,133586722,133590258	Gene ID= ENSG00000091527.15 TPM= 28.8 Transcript Type= NA
chr3	133573730	133590261	133573730	133590261	+	ENST00000264993.7@CDV3	ENST00000264993.7	protein_coding	133573730,133575039,133584002,133586563,133587896	133574284,133575115,133584150,133586722,133590261	Gene ID= ENSG00000091527.15 TPM= 54.49 Transcript Type= protein_coding
chr3	133574457	133590260	133574457	133590260	+	ENST00000420115.6@CDV3	ENST00000420115.6	protein_coding	133574457,133575039,133584002,133586563,133587162	133574592,133575115,133584150,133586722,133590260	Gene ID= ENSG00000091527.15 TPM= 11.29 Transcript Type= protein_coding
chr3	133576843	133579837	133576843	133579837	-	transcript5979.chr3.nnic@NA	transcript5979.chr3.nnic	NA	133576843	133579837	Gene ID= novel_gene_chr3_5980 TPM= 32.69 Transcript Type= NA
chr3	133600650	133661930	133600650	133661930	-	transcript5981.chr3.nic@TOPBP1	transcript5981.chr3.nic	protein_coding	133661769,133661044,133659016,133657798,133656676,133655290,133653345,133652463,133649780,133649383,133644020,133643200,133639959,133637876,133628560,133628362,133624052,133623311,133623091,133620155,133618213,133617160,133616814,133612389,133611004,133608873,133608535,133600650	133661930,133661134,133659150,133657941,133656857,133655486,133653524,133652614,133649943,133649633,133644363,133643372,133640170,133638162,133628733,133628471,133624175,133623457,133623193,133620347,133618433,133617326,133616925,133612552,133611141,133608962,133608696,133601393	Gene ID= ENSG00000163781.12 TPM= 4.67 Transcript Type= NA
chr3	133784033	133821492	133784033	133821492	+	ENST00000466490.6@SRPRB	ENST00000466490.6	protein_coding	133784033,133805676,133806609,133807746,133811117,133815590,133816878,133819553	133784144,133806002,133806703,133807823,133811199,133815726,133816932,133821492	Gene ID= ENSG00000144867.11 TPM= 44.37 Transcript Type= protein_coding
chr3	133932696	134030076	133932696	134030076	-	ENST00000310926.8@SLCO2A1	ENST00000310926.8	protein_coding	134029707,133979481,133973663,133954966,133953663,133951208,133948893,133948536,133947256,133945095,133942605,133938429,133935774,133932696	134030076,133979618,133973825,133955193,133953761,133951344,133948971,133948700,133947445,133945260,133942768,133938493,133935897,133934830	Gene ID= ENSG00000174640.12 TPM= 462.17 Transcript Type= protein_coding
chr3	133934611	134029914	133934611	134029914	-	ENST00000493729.5@SLCO2A1	ENST00000493729.5	protein_coding	134029707,133979481,133973663,133953663,133951208,133948893,133948536,133947256,133945095,133942605,133938429,133935774,133934611	134029914,133979618,133973825,133953761,133951344,133948971,133948700,133947445,133945260,133942768,133938493,133935897,133934830	Gene ID= ENSG00000174640.12 TPM= 10.31 Transcript Type= protein_coding
chr3	134157133	134250887	134157133	134250887	-	transcript6018.chr3.nnic@RYK	transcript6018.chr3.nnic	protein_coding	134250693,134250423,134222418,134211508,134209695,134207472,134202730,134195082,134191849,134188837,134183002,134177941,134175930,134175609,134159237,134157133	134250887,134250583,134222539,134211607,134209829,134207525,134202874,134195182,134191983,134188923,134183071,134178073,134176039,134175768,134159373,134158264	Gene ID= ENSG00000163785.12 TPM= 6.42 Transcript Type= NA
chr3	134157134	134250744	134157134	134250744	-	ENST00000620660.4@RYK	ENST00000620660.4	protein_coding	134250423,134222418,134211508,134209695,134207472,134202730,134195082,134191849,134188837,134183002,134177941,134175930,134175609,134159237,134157134	134250744,134222539,134211607,134209829,134207525,134202874,134195182,134191983,134188923,134183071,134178073,134176039,134175768,134159373,134158264	Gene ID= ENSG00000163785.12 TPM= 3.5 Transcript Type= protein_coding
chr3	134206643	134213834	134206643	134213834	+	transcript6038.chr3.nnic@NA	transcript6038.chr3.nnic	NA	134206643	134213834	Gene ID= novel_gene_chr3_6039 TPM= 2.34 Transcript Type= NA
chr3	134355346	134356224	134355346	134356224	-	transcript6050.chr3.nnic@NA	transcript6050.chr3.nnic	NA	134355346	134356224	Gene ID= novel_gene_chr3_6051 TPM= 2.34 Transcript Type= NA
chr3	134355877	134373771	134355877	134373771	-	transcript6040.chr3.nic@AMOTL2	transcript6040.chr3.nic	protein_coding	134373516,134370700,134367497,134366283,134365817,134361512,134360106,134359283,134358540,134355877	134373771,134371494,134367803,134366427,134365909,134361807,134360413,134359503,134358719,134357763	Gene ID= ENSG00000114019.14 TPM= 74.73 Transcript Type= NA
chr3	134355877	134374447	134355877	134374447	-	ENST00000422605.6@AMOTL2	ENST00000422605.6	protein_coding	134374342,134370700,134367497,134366283,134365817,134361512,134360106,134359283,134358540,134355877	134374447,134371494,134367803,134366427,134365909,134361807,134360413,134359503,134358716,134357763	Gene ID= ENSG00000114019.14 TPM= 30.36 Transcript Type= protein_coding
chr3	134358435	134361180	134358435	134361180	+	transcript6046.chr3.nnic@NA	transcript6046.chr3.nnic	NA	134358435	134361180	Gene ID= novel_gene_chr3_6047 TPM= 2.34 Transcript Type= NA
chr3	134477706	134486023	134477706	134486023	-	ENST00000510994.5@ANAPC13	ENST00000510994.5	protein_coding	134485320,134482806,134477706	134486023,134482931,134478715	Gene ID= ENSG00000129055.12 TPM= 23.94 Transcript Type= protein_coding
chr3	134477708	134486026	134477708	134486026	-	ENST00000354910.9@ANAPC13	ENST00000354910.9	protein_coding	134485952,134482806,134477708	134486026,134482931,134478715	Gene ID= ENSG00000129055.12 TPM= 46.12 Transcript Type= protein_coding
chr3	134485716	134575011	134485716	134575011	+	transcript6053.chr3.nic@CEP63	transcript6053.chr3.nic	protein_coding	134485716,134495296,134507109,134531845,134532778,134537155,134545586,134546149,134547335,134549062,134550063,134551926,134574793	134486052,134495364,134507286,134531940,134532900,134537268,134545819,134546288,134547472,134549176,134550260,134552012,134575011	Gene ID= ENSG00000182923.16 TPM= 2.34 Transcript Type= NA
chr3	134486042	134561766	134486042	134561766	+	transcript6058.chr3.nic@CEP63	transcript6058.chr3.nic	protein_coding	134486042,134495296,134507109,134531845,134532778,134537155,134545586,134546149,134549062,134550063,134551926,134561377	134486202,134495364,134507286,134531940,134532900,134537268,134545819,134546288,134549176,134550260,134552012,134561766	Gene ID= ENSG00000182923.16 TPM= 2.34 Transcript Type= NA
chr3	134486042	134539130	134486042	134539130	+	transcript6064.chr3.nnic@CEP63	transcript6064.chr3.nnic	protein_coding	134486042,134495296,134507109,134531845,134532778,134537155,134538312	134486202,134495364,134507286,134531940,134532900,134537268,134539130	Gene ID= ENSG00000182923.16 TPM= 2.34 Transcript Type= NA
chr3	134485743	134561768	134485743	134561768	+	ENST00000332047.9@CEP63	ENST00000332047.9	protein_coding	134485743,134495296,134507109,134531845,134532778,134537155,134545586,134546149,134549062,134550063,134551926,134561377	134486052,134495364,134507286,134531940,134532900,134537268,134545819,134546288,134549176,134550260,134552012,134561768	Gene ID= ENSG00000182923.16 TPM= 7.01 Transcript Type= protein_coding
chr3	134538200	134540595	134538200	134540595	-	transcript6071.chr3.nnic@NA	transcript6071.chr3.nnic	NA	134538200	134540595	Gene ID= novel_gene_chr3_6072 TPM= 7.01 Transcript Type= NA
chr3	134547616	134547989	134547616	134547989	-	transcript6069.chr3.nnic@NA	transcript6069.chr3.nnic	NA	134547616	134547989	Gene ID= novel_gene_chr3_6070 TPM= 4.67 Transcript Type= NA
chr3	134795262	135260467	134795262	135260467	+	ENST00000398015.7@EPHB1	ENST00000398015.7	protein_coding	134795262,134925816,134951371,135106448,135132714,135154152,135162018,135165968,135166942,135179860,135192576,135201474,135241148,135248316,135249336,135259012	134795689,134925880,134952052,135106603,135133049,135154276,135162180,135166076,135167006,135179982,135192823,135201689,135241297,135248509,135249491,135260467	Gene ID= ENSG00000154928.16 TPM= 2.34 Transcript Type= protein_coding
chr3	135965673	136147891	135965673	136147891	+	ENST00000264977.7@PPP2R3A	ENST00000264977.7	protein_coding	135965673,136001059,136026832,136040859,136049259,136070478,136078367,136082265,136087883,136090578,136102007,136103258,136106216,136145043	135965849,136003493,136027098,136040962,136049361,136070552,136078453,136082421,136087931,136090667,136102182,136103376,136106322,136147891	Gene ID= ENSG00000073711.10 TPM= 4.67 Transcript Type= protein_coding
chr3	136043329	136046466	136043329	136046466	+	transcript6078.chr3.nnic@NA	transcript6078.chr3.nnic	NA	136043329	136046466	Gene ID= novel_gene_chr3_6079 TPM= 2.34 Transcript Type= NA
chr3	136189501	136190555	136189501	136190555	+	transcript6086.chr3.nnic@NA	transcript6086.chr3.nnic	NA	136189501	136190555	Gene ID= novel_gene_chr3_6087 TPM= 3.5 Transcript Type= NA
chr3	136250339	136332589	136250339	136332589	+	transcript6101.chr3.nnic@PCCB	transcript6101.chr3.nnic	protein_coding	136250339,136255856,136256555,136260479,136261952,136283837,136293756,136297952,136301030,136316941,136326803,136327155,136327634,136328758,136329905,136332040	136250558,136255975,136256623,136260535,136262065,136283947,136293864,136298072,136301111,136317064,136326910,136327255,136327732,136328857,136331336,136332589	Gene ID= ENSG00000114054.13 TPM= 5.84 Transcript Type= NA
chr3	136250339	136332589	136250339	136332589	+	transcript6102.chr3.nnic@PCCB	transcript6102.chr3.nnic	protein_coding	136250339,136255856,136256555,136260479,136261952,136283837,136293756,136297952,136301030,136316941,136326803,136327155,136327634,136328758,136329905,136331977	136250558,136255975,136256623,136260535,136262065,136283947,136293864,136298072,136301111,136317064,136326910,136327255,136327732,136328857,136331364,136332589	Gene ID= ENSG00000114054.13 TPM= 4.67 Transcript Type= NA
chr3	136250306	136330169	136250306	136330169	+	ENST00000251654.8@PCCB	ENST00000251654.8	protein_coding	136250306,136255856,136256555,136260479,136261952,136283837,136293756,136297952,136301030,136316941,136326803,136327155,136327634,136328758,136329905	136250558,136255975,136256623,136260535,136262065,136283947,136293864,136298072,136301111,136317064,136326910,136327255,136327732,136328857,136330169	Gene ID= ENSG00000114054.13 TPM= 47.87 Transcript Type= protein_coding
chr3	136250355	136330169	136250355	136330169	+	ENST00000466072.5@PCCB	ENST00000466072.5	protein_coding	136250355,136255856,136256555,136260479,136261952,136283837,136293756,136297952,136301030,136316941,136326326,136326803,136327155,136327634,136328758,136329905	136250558,136255975,136256623,136260535,136262065,136283947,136293864,136298072,136301111,136317064,136326385,136326910,136327255,136327732,136328857,136330169	Gene ID= ENSG00000114054.13 TPM= 5.84 Transcript Type= protein_coding
chr3	136250355	136330169	136250355	136330169	+	ENST00000484181.5@PCCB	ENST00000484181.5	protein_coding	136250355,136255856,136256555,136260479,136261952,136283837,136293756,136297952,136301030,136316941,136326803,136327634,136328758,136329905	136250558,136255975,136256623,136260535,136262065,136283947,136293864,136298072,136301111,136317064,136326910,136327732,136328857,136330169	Gene ID= ENSG00000114054.13 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr3	136336233	136752368	136336233	136752368	-	ENST00000383202.6@STAG1	ENST00000383202.6	protein_coding	136752195,136630870,136623146,136604309,136568765,136542119,136521213,136502628,136500223,136477289,136473539,136472413,136464881,136452033,136443287,136433556,136422952,136422768,136422410,136421093,136417885,136398749,136377660,136369108,136366943,136363366,136359148,136357720,136349158,136343832,136341441,136340491,136338370,136336233	136752368,136630981,136623248,136604473,136568861,136542195,136521417,136502779,136500296,136477412,136473637,136472492,136464988,136452147,136443404,136433659,136423044,136422857,136422613,136421163,136417972,136398829,136377752,136369282,136367082,136363467,136359296,136357848,136349363,136344006,136341551,136340605,136338450,136338277	Gene ID= ENSG00000118007.12 TPM= 23.35 Transcript Type= protein_coding
chr3	136711650	136714908	136711650	136714908	+	transcript6114.chr3.nnic@NA	transcript6114.chr3.nnic	NA	136711650	136714908	Gene ID= novel_gene_chr3_6115 TPM= 2.34 Transcript Type= NA
chr3	136819095	136855888	136819095	136855888	+	transcript6119.chr3.nnic@SLC35G2	transcript6119.chr3.nnic	protein_coding	136819095,136854443	136819363,136855888	Gene ID= ENSG00000168917.8 TPM= 2.72 Transcript Type= NA
chr3	136819019	136855892	136819019	136855892	+	ENST00000446465.2@SLC35G2	ENST00000446465.2	protein_coding	136819019,136854443	136819628,136855892	Gene ID= ENSG00000168917.8 TPM= 8.56 Transcript Type= protein_coding
chr3	136819084	136855888	136819084	136855888	+	ENST00000393079.3@SLC35G2	ENST00000393079.3	protein_coding	136819084,136854443	136819214,136855888	Gene ID= ENSG00000168917.8 TPM= 3.89 Transcript Type= protein_coding
chr3	136862208	136949126	136862208	136949126	+	ENST00000481752.5@NCK1	ENST00000481752.5	protein_coding	136862208,136927984,136945583,136948259	136862353,136928227,136946295,136949126	Gene ID= ENSG00000158092.6 TPM= 8.17 Transcript Type= protein_coding
chr3	136930470	136949823	136930470	136949823	+	ENST00000469404.1@NCK1	ENST00000469404.1	protein_coding	136930470,136945583,136948259	136930594,136946295,136949823	Gene ID= ENSG00000158092.6 TPM= 5.84 Transcript Type= protein_coding
chr3	136862208	136949126	136862208	136949126	+	ENST00000288986.6@NCK1	ENST00000288986.6	protein_coding	136862208,136927984,136945583,136948259	136862319,136928227,136946295,136949126	Gene ID= ENSG00000158092.6 TPM= 22.18 Transcript Type= protein_coding
chr3	136957865	137011085	136957865	137011085	+	ENST00000329582.8@IL20RB	ENST00000329582.8	protein_coding	136957865,136980466,136982160,136989441,136991938,136995414,137010113	136958201,136980592,136982350,136989565,136992088,136995556,137011085	Gene ID= ENSG00000174564.12 TPM= 4.67 Transcript Type= protein_coding
chr3	138010000	138033649	138010000	138033649	+	ENST00000183605.9@CLDN18	ENST00000183605.9	protein_coding	138010000,138023658,138024607,138029797,138030970	138010445,138023822,138024724,138029907,138033649	Gene ID= ENSG00000066405.12 TPM= 269.13 Transcript Type= protein_coding
chr3	138161012	138174949	138161012	138174949	-	ENST00000260803.8@DBR1	ENST00000260803.8	protein_coding	138174599,138173502,138171633,138170107,138167081,138163778,138163349,138161012	138174949,138173626,138171713,138170192,138167305,138163858,138163494,138162582	Gene ID= ENSG00000138231.12 TPM= 8.17 Transcript Type= protein_coding
chr3	138187267	138296549	138187267	138296549	+	ENST00000481646.5@ARMC8	ENST00000481646.5	protein_coding	138187267,138188455,138209817,138221926,138223389,138223636,138228918,138235034,138237309,138237482,138239468,138241783,138245088,138263739,138264131,138267155,138270040,138272967,138274449,138284431,138289048,138290546,138295859	138187599,138188530,138209893,138221997,138223531,138223733,138229010,138235114,138237384,138237572,138239528,138241983,138245183,138263821,138264212,138267241,138270132,138273116,138274544,138284526,138289120,138290639,138296549	Gene ID= ENSG00000114098.17 TPM= 3.5 Transcript Type= protein_coding
chr3	138187284	138298389	138187284	138298389	+	ENST00000469044.5@ARMC8	ENST00000469044.5	protein_coding	138187284,138209817,138221926,138223389,138223636,138228918,138235034,138237309,138237482,138239468,138241783,138245088,138263739,138264131,138267155,138270040,138272967,138274449,138284431,138289048,138290546,138295859	138187599,138209893,138221997,138223531,138223733,138229010,138235114,138237384,138237572,138239528,138241983,138245183,138263821,138264212,138267241,138270132,138273116,138274544,138284526,138289120,138290639,138298389	Gene ID= ENSG00000114098.17 TPM= 6.42 Transcript Type= protein_coding
chr3	138187315	138298389	138187315	138298389	+	transcript6173.chr3.nic@ARMC8	transcript6173.chr3.nic	protein_coding	138187315,138221926,138223389,138223636,138228918,138235034,138237309,138237482,138239468,138241783,138245088,138263739,138264131,138267155,138270040,138272967,138274449,138284431,138289048,138290546,138295859	138187599,138221997,138223531,138223733,138229010,138235114,138237384,138237572,138239528,138241983,138245183,138263821,138264212,138267241,138270132,138273116,138274544,138284526,138289120,138290639,138298389	Gene ID= ENSG00000114098.17 TPM= 5.25 Transcript Type= NA
chr3	138187342	138246887	138187342	138246887	+	ENST00000358441.6@ARMC8	ENST00000358441.6	protein_coding	138187342,138188401,138209817,138221926,138223389,138223636,138228918,138235034,138237309,138237482,138239468,138241783,138245088	138187599,138188530,138209893,138221997,138223531,138223733,138229010,138235114,138237384,138237572,138239528,138241983,138246887	Gene ID= ENSG00000114098.17 TPM= 1.17 Transcript Type= protein_coding
chr3	138187529	138246857	138187529	138246857	+	ENST00000471453.5@ARMC8	ENST00000471453.5	protein_coding	138187529,138188455,138209817,138221926,138223389,138223636,138228918,138235034,138237309,138237482,138239468,138241783,138245088	138187599,138188530,138209893,138221997,138223531,138223733,138229010,138235114,138237384,138237572,138239528,138241983,138246857	Gene ID= ENSG00000114098.17 TPM= 1.17 Transcript Type= protein_coding
chr3	138188380	138191658	138188380	138191658	-	transcript6184.chr3.nnic@NA	transcript6184.chr3.nnic	NA	138188380	138191658	Gene ID= novel_gene_chr3_6185 TPM= 2.34 Transcript Type= NA
chr3	138347697	138405533	138347697	138405533	+	ENST00000289104.8@MRAS	ENST00000289104.8	protein_coding	138347697,138372866,138397324,138398469,138400534,138402170	138348325,138373076,138397477,138398568,138400613,138405533	Gene ID= ENSG00000158186.12 TPM= 18.1 Transcript Type= protein_coding
chr3	138348578	138405533	138348578	138405533	+	transcript6196.chr3.nic@MRAS	transcript6196.chr3.nic	protein_coding	138348578,138372866,138397324,138398469,138400534,138402170	138349032,138373076,138397477,138398568,138400613,138405533	Gene ID= ENSG00000158186.12 TPM= 62.47 Transcript Type= NA
chr3	138347648	138405534	138347648	138405534	+	ENST00000614350.4@MRAS	ENST00000614350.4	protein_coding	138347648,138397324,138398469,138400534,138402170	138348325,138397477,138398568,138400613,138405534	Gene ID= ENSG00000158186.12 TPM= 10.51 Transcript Type= protein_coding
chr3	138348403	138350964	138348403	138350964	+	transcript6202.chr3.nnic@MRAS	transcript6202.chr3.nnic	protein_coding	138348403,138349212,138349684	138349032,138349379,138350964	Gene ID= ENSG00000158186.12 TPM= 5.84 Transcript Type= NA
chr3	138348580	138352474	138348580	138352474	+	transcript6207.chr3.nnic@MRAS	transcript6207.chr3.nnic	protein_coding	138348580,138349247,138349684	138349032,138349379,138352474	Gene ID= ENSG00000158186.12 TPM= 3.5 Transcript Type= NA
chr3	138434616	138477006	138434616	138477006	+	transcript6223.chr3.nic@ESYT3	transcript6223.chr3.nic	protein_coding	138434616,138452048,138455194,138457568,138459187,138459945,138460611,138462086,138464345,138465339,138467561,138468105,138468655,138468819,138469436,138470060,138472363,138473536,138474221,138476223,138476443,138476818	138435125,138452089,138455328,138457644,138459253,138460034,138460666,138462206,138464515,138465421,138467609,138468194,138468717,138468881,138469504,138471026,138472859,138473634,138474352,138476328,138476492,138477006	Gene ID= ENSG00000158220.13 TPM= 2.92 Transcript Type= NA
chr3	138434613	138478414	138434613	138478414	+	ENST00000389567.8@ESYT3	ENST00000389567.8	protein_coding	138434613,138452048,138455194,138457568,138459187,138459945,138460611,138462086,138464345,138465339,138467561,138468105,138468655,138468819,138469436,138470060,138470877,138472363,138473536,138474221,138476223,138476443,138476818	138435125,138452089,138455328,138457644,138459253,138460034,138460666,138462206,138464515,138465421,138467609,138468194,138468717,138468881,138469504,138470146,138471026,138472859,138473634,138474352,138476328,138476492,138478414	Gene ID= ENSG00000158220.13 TPM= 29.77 Transcript Type= protein_coding
chr3	138494344	138594356	138494344	138594356	-	ENST00000264982.7@CEP70	ENST00000264982.7	protein_coding	138594198,138591854,138572859,138571266,138571034,138570318,138537178,138532514,138529375,138529199,138525490,138508439,138505295,138500735,138500399,138500110,138498031,138494344	138594356,138591956,138572932,138571356,138571157,138570498,138537347,138532570,138529462,138529287,138525564,138508544,138505465,138500881,138500567,138500224,138498110,138495076	Gene ID= ENSG00000114107.8 TPM= 8.17 Transcript Type= protein_coding
chr3	138499884	138594225	138499884	138594225	-	transcript6247.chr3.nic@CEP70	transcript6247.chr3.nic	protein_coding	138594198,138591854,138572859,138571266,138571034,138570318,138537178,138532514,138529375,138529199,138525490,138508439,138505295,138500735,138500399,138499884	138594225,138591956,138572984,138571356,138571157,138570498,138537347,138532570,138529462,138529287,138525564,138508544,138505465,138500881,138500567,138500224	Gene ID= ENSG00000114107.8 TPM= 3.5 Transcript Type= NA
chr3	138536577	138594225	138536577	138594225	-	transcript6254.chr3.nic@CEP70	transcript6254.chr3.nic	protein_coding	138594198,138591854,138572859,138571266,138571034,138570318,138536577	138594225,138591956,138572984,138571356,138571157,138570498,138537347	Gene ID= ENSG00000114107.8 TPM= 3.5 Transcript Type= NA
chr3	138588000	138594225	138588000	138594225	-	transcript6258.chr3.nic@CEP70	transcript6258.chr3.nic	protein_coding	138594198,138588000	138594225,138591956	Gene ID= ENSG00000114107.8 TPM= 7.01 Transcript Type= NA
chr3	138495003	138594224	138495003	138594224	-	ENST00000484888.5@CEP70	ENST00000484888.5	protein_coding	138594198,138591854,138572859,138571266,138571034,138570318,138537178,138532514,138529375,138529199,138525490,138508439,138505295,138500735,138500399,138500110,138498031,138495003	138594224,138591956,138572984,138571356,138571157,138570498,138537347,138532570,138529462,138529287,138525564,138508544,138505465,138500881,138500567,138500224,138498110,138495076	Gene ID= ENSG00000114107.8 TPM= 1.17 Transcript Type= protein_coding
chr3	138608700	138633376	138608700	138633376	+	ENST00000360570.7@FAIM	ENST00000360570.7	protein_coding	138608700,138619711,138621407,138622188,138629107,138632930	138608937,138619770,138621539,138622416,138629156,138633376	Gene ID= ENSG00000158234.12 TPM= 1.17 Transcript Type= protein_coding
chr3	138608851	138633376	138608851	138633376	+	ENST00000393035.6@FAIM	ENST00000393035.6	protein_coding	138608851,138621407,138622188,138629107,138632930	138608937,138621539,138622416,138629156,138633376	Gene ID= ENSG00000158234.12 TPM= 2.34 Transcript Type= protein_coding
chr3	138654022	138834927	138654022	138834927	-	transcript6266.chr3.nic@PIK3CB	transcript6266.chr3.nic	protein_coding	138834695,138796463,138770051,138759173,138755754,138742558,138737707,138734634,138733361,138714468,138712208,138707159,138704443,138698907,138694786,138691000,138688875,138684625,138683678,138681967,138665036,138663906,138657690,138656142,138654022	138834927,138796567,138770117,138759359,138755979,138742781,138737886,138734804,138733438,138714719,138712304,138707289,138704493,138699095,138694907,138691143,138688974,138684803,138683787,138682045,138665203,138664029,138657835,138656274,138655526	Gene ID= ENSG00000051382.8 TPM= 3.41 Transcript Type= NA
chr3	138654022	138834953	138654022	138834953	-	transcript6267.chr3.nnic@PIK3CB	transcript6267.chr3.nnic	protein_coding	138834695,138796463,138788839,138759173,138755754,138742558,138737707,138734634,138733361,138714468,138712208,138707159,138704443,138698907,138694786,138691000,138688875,138684625,138683678,138681967,138665036,138663906,138657690,138656142,138654022	138834953,138796567,138788936,138759359,138755979,138742781,138737886,138734804,138733438,138714719,138712304,138707289,138704493,138699095,138694907,138691143,138688974,138684803,138683787,138682045,138665203,138664029,138657835,138656274,138655526	Gene ID= ENSG00000051382.8 TPM= 3.41 Transcript Type= NA
chr3	138654022	138835412	138654022	138835412	-	transcript6270.chr3.nic@PIK3CB	transcript6270.chr3.nic	protein_coding	138834695,138796463,138759173,138755754,138742558,138737707,138734634,138733361,138714468,138712208,138707159,138704443,138698907,138694786,138691000,138688875,138684625,138683678,138681967,138665036,138663906,138657690,138656142,138654022	138835412,138796567,138759359,138755979,138742781,138737886,138734804,138733438,138714719,138712304,138707289,138704493,138699095,138694907,138691143,138688974,138684803,138683787,138682045,138665203,138664029,138657835,138656274,138655526	Gene ID= ENSG00000051382.8 TPM= 26.76 Transcript Type= NA
chr3	138654068	138834917	138654068	138834917	-	ENST00000462898.5@PIK3CB	ENST00000462898.5	protein_coding	138834695,138759173,138755754,138742558,138737707,138734634,138733361,138714468,138712208,138707159,138704443,138698907,138694786,138691000,138688875,138684625,138683678,138681967,138665036,138663906,138657690,138656142,138654068	138834917,138759359,138755979,138742755,138737886,138734804,138733438,138714719,138712304,138707289,138704493,138699095,138694907,138691143,138688974,138684803,138683787,138682045,138665203,138664029,138657835,138656274,138655526	Gene ID= ENSG00000051382.8 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr3	139005806	139357046	139005806	139357046	+	ENST00000495075.5@MRPS22	ENST00000495075.5	protein_coding	139005806,139180290,139343956,139346878,139348160,139350179,139350977,139352647,139355682,139356919	139006095,139180360,139344198,139347044,139348324,139350322,139351060,139352792,139355790,139357046	Gene ID= ENSG00000175110.11 TPM= 36.2 Transcript Type= protein_coding
chr3	139344002	139357119	139344002	139357119	+	transcript6313.chr3.nic@MRPS22	transcript6313.chr3.nic	protein_coding	139344002,139346878,139348160,139350977,139352647,139355682,139356919	139344198,139347044,139350322,139351060,139352792,139355790,139357119	Gene ID= ENSG00000175110.11 TPM= 2.34 Transcript Type= NA
chr3	139344027	139357051	139344027	139357051	+	ENST00000480938.5@MRPS22	ENST00000480938.5	protein_coding	139344027,139346878,139348160,139350179,139352647,139355682,139356919	139344198,139347044,139348324,139351060,139352792,139355790,139357051	Gene ID= ENSG00000175110.11 TPM= 2.34 Transcript Type= retained_intron
chr3	139357593	139389656	139357593	139389656	-	transcript6292.chr3.nic@COPB2	transcript6292.chr3.nic	protein_coding	139389548,139385004,139383298,139379380,139379047,139378041,139375468,139374489,139373666,139373213,139371723,139369456,139369261,139368145,139367015,139366568,139362407,139361081,139359270,139358998,139358744,139358200,139357593	139389656,139385200,139383435,139379466,139379173,139378189,139375614,139374588,139373808,139373412,139371833,139369544,139369367,139368288,139367145,139366775,139362517,139361295,139359362,139359178,139358812,139358271,139357958	Gene ID= ENSG00000184432.9 TPM= 9.34 Transcript Type= NA
chr3	139353945	139389680	139353945	139389680	-	transcript6293.chr3.nic@COPB2	transcript6293.chr3.nic	protein_coding	139389548,139383298,139379380,139379047,139378041,139375468,139374489,139373666,139373213,139371723,139369456,139369261,139368145,139367015,139366568,139362407,139361081,139359270,139358998,139358744,139358200,139353945	139389680,139383435,139379466,139379173,139378189,139375614,139374588,139373808,139373412,139371833,139369544,139369367,139368288,139367145,139366775,139362517,139361295,139359362,139359178,139358812,139358271,139355767	Gene ID= ENSG00000184432.9 TPM= 6.66 Transcript Type= NA
chr3	139357593	139389657	139357593	139389657	-	transcript6295.chr3.nic@COPB2	transcript6295.chr3.nic	protein_coding	139389469,139383298,139379380,139379047,139378041,139375468,139374489,139373666,139373213,139371723,139369456,139369261,139368145,139367015,139366568,139362407,139361081,139359270,139358998,139358744,139358200,139357593	139389657,139383435,139379466,139379173,139378189,139375614,139374588,139373808,139373412,139371833,139369544,139369367,139368288,139367145,139366775,139362517,139361295,139359362,139359178,139358812,139358271,139357958	Gene ID= ENSG00000184432.9 TPM= 9.34 Transcript Type= NA
chr3	139357406	139389732	139357406	139389732	-	ENST00000333188.9@COPB2	ENST00000333188.9	protein_coding	139389548,139383298,139379380,139379047,139378041,139375468,139374489,139373666,139373213,139371723,139369456,139369261,139368145,139367015,139366568,139362407,139361081,139359270,139358998,139358744,139358200,139357406	139389732,139383435,139379466,139379173,139378189,139375614,139374588,139373808,139373412,139371833,139369544,139369367,139368288,139367145,139366775,139362517,139361295,139359362,139359178,139358812,139358271,139357958	Gene ID= ENSG00000184432.9 TPM= 147.93 Transcript Type= protein_coding
chr3	139560191	139677993	139560191	139677993	-	transcript6321.chr3.nnic@NMNAT3	transcript6321.chr3.nnic	protein_coding	139677705,139627616,139578872,139573598,139560191	139677993,139627764,139579055,139573680,139561392	Gene ID= ENSG00000163864.15 TPM= 4.67 Transcript Type= NA
chr3	140941856	140979939	140941856	140979939	+	transcript6336.chr3.nic@SLC25A36	transcript6336.chr3.nic	protein_coding	140941856,140956527,140959463,140963127,140966934,140970927,140973716,140976260	140942095,140956691,140959540,140963227,140967036,140970993,140974005,140979939	Gene ID= ENSG00000114120.11 TPM= 3.5 Transcript Type= NA
chr3	140941801	140961885	140941801	140961885	+	transcript6348.chr3.nic@SLC25A36	transcript6348.chr3.nic	protein_coding	140941801,140956527,140959463	140942095,140956691,140961885	Gene ID= ENSG00000114120.11 TPM= 3.5 Transcript Type= NA
chr3	140941830	140979933	140941830	140979933	+	ENST00000446041.6@SLC25A36	ENST00000446041.6	protein_coding	140941830,140956527,140959463,140963127,140970927,140973716,140976263	140942095,140956691,140959540,140963227,140970993,140974005,140979933	Gene ID= ENSG00000114120.11 TPM= 37.36 Transcript Type= protein_coding
chr3	140941887	140966211	140941887	140966211	+	ENST00000507429.5@SLC25A36	ENST00000507429.5	protein_coding	140941887,140956527,140959463,140963127	140942095,140956691,140959540,140966211	Gene ID= ENSG00000114120.11 TPM= 3.5 Transcript Type= protein_coding
chr3	141051402	141148611	141051402	141148611	+	ENST00000310546.2@SPSB4	ENST00000310546.2	protein_coding	141051402,141065952,141147142	141051992,141066798,141148611	Gene ID= ENSG00000175093.4 TPM= 4.67 Transcript Type= protein_coding
chr3	141417749	141421002	141417749	141421002	+	transcript6367.chr3.nnic@NA	transcript6367.chr3.nnic	NA	141417749	141421002	Gene ID= novel_gene_chr3_6368 TPM= 3.5 Transcript Type= NA
chr3	141444408	141448630	141444408	141448630	+	transcript6363.chr3.nnic@NA	transcript6363.chr3.nnic	NA	141444408	141448630	Gene ID= novel_gene_chr3_6364 TPM= 8.17 Transcript Type= NA
chr3	141487049	141615342	141487049	141615342	+	ENST00000286364.7@RASA2	ENST00000286364.7	protein_coding	141487049,141512163,141516328,141529708,141540533,141553857,141555840,141558886,141559894,141570912,141571406,141572609,141573147,141573944,141577000,141580368,141581100,141586025,141586646,141607678,141608489,141609420,141609877,141612283	141487216,141512280,141516431,141529802,141540609,141553940,141555912,141558962,141559995,141571068,141571554,141572723,141573221,141574067,141577106,141580451,141581177,141586098,141586752,141607760,141608697,141609523,141610066,141615342	Gene ID= ENSG00000155903.11 TPM= 16.35 Transcript Type= protein_coding
chr3	141738297	141745702	141738297	141745702	+	ENST00000393000.3@RNF7	ENST00000393000.3	protein_coding	141738297,141743509,141745159	141738509,141743556,141745702	Gene ID= ENSG00000114125.13 TPM= 77.64 Transcript Type= protein_coding
chr3	141738277	141745700	141738277	141745700	+	ENST00000480908.1@RNF7	ENST00000480908.1	protein_coding	141738277,141745159	141738516,141745700	Gene ID= ENSG00000114125.13 TPM= 1.75 Transcript Type= protein_coding
chr3	141738304	141745669	141738304	141745669	+	ENST00000477012.5@RNF7	ENST00000477012.5	protein_coding	141738304,141742644,141743509,141745159	141738516,141742907,141743556,141745669	Gene ID= ENSG00000114125.13 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr3	141742225	141747507	141742225	141747507	-	transcript6385.chr3.nnic@NA	transcript6385.chr3.nnic	NA	141742225	141747507	Gene ID= novel_gene_chr3_6386 TPM= 5.84 Transcript Type= NA
chr3	141876614	141926484	141876614	141926484	+	ENST00000286371.7@ATP1B3	ENST00000286371.7	protein_coding	141876614,141903620,141907167,141913652,141915970,141921977,141925531	141876910,141903748,141907274,141913836,141916020,141922063,141926484	Gene ID= ENSG00000069849.10 TPM= 26.85 Transcript Type= protein_coding
chr3	141952481	142149532	141952481	142149532	-	ENST00000467072.5@TFDP2	ENST00000467072.5	protein_coding	142149183,142101735,142093061,142054115,142005441,141995020,141993538,141978520,141974048,141970073,141963812,141959674,141952911,141952481	142149532,142101841,142093127,142054149,142005544,141995141,141993585,141978682,141974194,141970141,141963963,141959840,141953016,141952696	Gene ID= ENSG00000114126.17 TPM= 1.17 Transcript Type= protein_coding
chr3	141951502	142028665	141951502	142028665	-	ENST00000486111.5@TFDP2	ENST00000486111.5	protein_coding	142028579,142005441,141995020,141993538,141978520,141974048,141970073,141963812,141959674,141952911,141951502	142028665,142005544,141995141,141993585,141978682,141974194,141970141,141963963,141959840,141953016,141952696	Gene ID= ENSG00000114126.17 TPM= 1.17 Transcript Type= protein_coding
chr3	141947420	141948568	141947420	141948568	-	transcript6409.chr3.nnic@NA	transcript6409.chr3.nnic	NA	141947420	141948568	Gene ID= novel_gene_chr3_6410 TPM= 3.5 Transcript Type= NA
chr3	142157527	142225607	142157527	142225607	-	ENST00000392993.6@GK5	ENST00000392993.6	protein_coding	142225309,142215599,142213526,142204695,142198802,142187704,142186452,142186194,142185929,142182923,142181461,142177482,142172353,142171419,142170325,142157527	142225607,142215692,142213601,142204788,142198933,142187779,142186513,142186267,142185989,142183049,142181565,142177576,142172456,142171478,142170458,142165770	Gene ID= ENSG00000175066.15 TPM= 2.34 Transcript Type= protein_coding
chr3	142170183	142225608	142170183	142225608	-	transcript6422.chr3.nic@GK5	transcript6422.chr3.nic	protein_coding	142225309,142215599,142213526,142204695,142198802,142187704,142186452,142186194,142185929,142182923,142181461,142177482,142172353,142171419,142170183	142225608,142215692,142213601,142204788,142198933,142187779,142186513,142186267,142185989,142183049,142181565,142177576,142172456,142171478,142170458	Gene ID= ENSG00000175066.15 TPM= 2.34 Transcript Type= NA
chr3	142306607	142448062	142306607	142448062	-	ENST00000264951.8@XRN1	ENST00000264951.8	protein_coding	142447870,142432661,142426744,142425429,142425222,142423560,142422835,142422582,142421476,142421016,142418815,142418504,142417140,142414135,142412544,142404907,142403869,142403674,142400444,142397329,142384523,142383300,142380082,142376479,142375798,142371239,142370485,142365310,142365047,142359862,142356912,142355401,142347234,142335448,142332967,142332375,142329434,142318790,142318592,142313136,142312598,142306607	142448062,142432893,142426841,142425538,142425332,142423642,142422922,142422750,142421543,142421153,142418881,142418609,142417229,142414291,142412663,142405076,142403989,142403772,142400547,142397460,142384685,142383413,142380180,142376594,142375944,142371328,142370620,142365366,142365179,142359931,142357119,142355496,142347342,142335509,142333089,142332531,142329615,142318903,142318694,142313174,142312758,142311813	Gene ID= ENSG00000114127.10 TPM= 5.84 Transcript Type= protein_coding
chr3	142596418	142713659	142596418	142713659	+	transcript6436.chr3.nic@PLS1	transcript6436.chr3.nic	protein_coding	142596418,142627816,142664202,142669390,142670993,142676157,142678032,142684006,142684253,142686284,142689618,142694469,142697953,142703868,142704463,142711501,142711872	142596509,142627908,142664307,142669553,142671122,142676289,142678113,142684171,142684395,142686376,142689813,142694547,142698067,142704001,142704586,142711625,142713659	Gene ID= ENSG00000120756.12 TPM= 2.92 Transcript Type= NA
chr3	142596387	142713664	142596387	142713664	+	ENST00000457734.6@PLS1	ENST00000457734.6	protein_coding	142596387,142664202,142669390,142670993,142676157,142678032,142684006,142684253,142686284,142689618,142694469,142697953,142703868,142704463,142711501,142711872	142596509,142664307,142669553,142671122,142676289,142678113,142684171,142684395,142686376,142689813,142694547,142698067,142704001,142704586,142711625,142713664	Gene ID= ENSG00000120756.12 TPM= 33.28 Transcript Type= protein_coding
chr3	142817869	142889203	142817869	142889203	-	ENST00000295992.7@PCOLCE2	ENST00000295992.7	protein_coding	142888814,142887669,142848217,142842924,142838770,142829692,142823532,142820878,142817869	142889203,142887777,142848472,142843048,142838906,142829846,142823615,142821045,142818465	Gene ID= ENSG00000163710.7 TPM= 46.7 Transcript Type= protein_coding
chr3	143000907	143001467	143000907	143001467	-	ENST00000597953.1@AC026304.1	ENST00000597953.1	lincRNA	143000907	143001467	Gene ID= ENSG00000268129.1 TPM= 2.34 Transcript Type= lincRNA
chr3	143001539	143060546	143001539	143060546	+	ENST00000473835.6@U2SURP	ENST00000473835.6	protein_coding	143001539,143010815,143012222,143014311,143016257,143016842,143019969,143020599,143021350,143021473,143022497,143022853,143023975,143027149,143028340,143028483,143032784,143033271,143034888,143035982,143037179,143038108,143038894,143043117,143050939,143053676,143054943,143056312	143001673,143010859,143012353,143014409,143016371,143016975,143020036,143020693,143021385,143021555,143022662,143023064,143024018,143027253,143028406,143028646,143032946,143033350,143034975,143036104,143037335,143038203,143038960,143043276,143051049,143053794,143055119,143060546	Gene ID= ENSG00000163714.17 TPM= 23.35 Transcript Type= protein_coding
chr3	143001596	143057653	143001596	143057653	+	transcript6454.chr3.nic@U2SURP	transcript6454.chr3.nic	protein_coding	143001596,143010815,143012222,143014311,143016257,143016842,143019969,143020599,143021350,143021473,143022497,143022853,143023975,143027149,143028340,143028483,143032784,143033271,143034888,143035982,143037179,143038108,143038894,143043117,143050939,143053676,143056312	143001673,143010859,143012353,143014409,143016371,143016975,143020036,143020693,143021382,143021555,143022662,143023064,143024018,143027253,143028406,143028646,143032946,143033350,143034975,143036104,143037335,143038203,143038960,143043276,143051049,143053794,143057653	Gene ID= ENSG00000163714.17 TPM= 2.34 Transcript Type= NA
chr3	143001621	143056846	143001621	143056846	+	ENST00000493598.6@U2SURP	ENST00000493598.6	protein_coding	143001621,143010815,143012222,143014311,143016257,143016842,143019969,143020599,143021350,143021473,143022497,143022853,143023975,143027149,143028340,143028487,143032784,143033271,143034888,143035982,143037179,143038108,143038894,143043117,143050939,143053676,143054943,143056312	143001673,143010859,143012353,143014409,143016371,143016975,143020036,143020693,143021382,143021555,143022662,143023064,143024018,143027253,143028410,143028646,143032946,143033350,143034975,143036104,143037335,143038203,143038960,143043276,143051049,143053794,143055119,143056846	Gene ID= ENSG00000163714.17 TPM= 21.02 Transcript Type= protein_coding
chr3	143119343	143122970	143119343	143122970	+	transcript6463.chr3.nnic@CHST2	transcript6463.chr3.nnic	protein_coding	143119343,143120078,143120644	143119840,143120541,143122970	Gene ID= ENSG00000175040.5 TPM= 15.76 Transcript Type= NA
chr3	143119331	143124014	143119331	143124014	+	ENST00000309575.4@CHST2	ENST00000309575.4	protein_coding	143119331,143120644	143120541,143124014	Gene ID= ENSG00000175040.5 TPM= 16.35 Transcript Type= protein_coding
chr3	143265222	143848531	143265222	143848531	-	ENST00000316549.10@SLC9A9	ENST00000316549.10	protein_coding	143848148,143832019,143796826,143795001,143693192,143652255,143578585,143574088,143552362,143495335,143493653,143467037,143382060,143363484,143268875,143265222	143848531,143832221,143796903,143795077,143693307,143652360,143578723,143574193,143552450,143495448,143493764,143467190,143382114,143363563,143268980,143266929	Gene ID= ENSG00000181804.14 TPM= 14.01 Transcript Type= protein_coding
chr3	143971798	143992359	143971798	143992359	+	ENST00000315691.7@C3orf58	ENST00000315691.7	protein_coding	143971798,143985543,143989510	143972989,143985846,143992359	Gene ID= ENSG00000181744.8 TPM= 52.54 Transcript Type= protein_coding
chr3	146069440	146161184	146069440	146161184	-	transcript6478.chr3.nic@PLOD2	transcript6478.chr3.nic	protein_coding	146160881,146124138,146121112,146110285,146106532,146104279,146102755,146091800,146088586,146086787,146085169,146081738,146079116,146076782,146073287,146072561,146071277,146071042,146069440	146161184,146124229,146121248,146110448,146106644,146104342,146102852,146091901,146088711,146086908,146085273,146081863,146079257,146077924,146073352,146072665,146071423,146071167,146070872	Gene ID= ENSG00000152952.11 TPM= 5.06 Transcript Type= NA
chr3	146069440	146161167	146069440	146161167	-	ENST00000282903.9@PLOD2	ENST00000282903.9	protein_coding	146160881,146124138,146121112,146110285,146106532,146104279,146102755,146091800,146088586,146086787,146085169,146081738,146079116,146077862,146076782,146073287,146072561,146071277,146071042,146069440	146161167,146124229,146121248,146110448,146106644,146104342,146102852,146091901,146088711,146086908,146085273,146081863,146079257,146077924,146076895,146073352,146072665,146071423,146071167,146070872	Gene ID= ENSG00000152952.11 TPM= 43.59 Transcript Type= protein_coding
chr3	146069444	146161167	146069444	146161167	-	ENST00000360060.7@PLOD2	ENST00000360060.7	protein_coding	146160881,146124138,146121112,146110285,146106532,146104279,146102755,146091800,146088586,146086787,146085169,146081738,146079116,146076782,146073287,146072561,146071277,146071042,146069444	146161167,146124229,146121248,146110448,146106644,146104342,146102852,146091901,146088711,146086908,146085273,146081863,146079257,146076895,146073352,146072665,146071423,146071167,146070872	Gene ID= ENSG00000152952.11 TPM= 16.73 Transcript Type= protein_coding
chr3	146192339	146251176	146192339	146251176	-	transcript6487.chr3.nic@PLSCR4	transcript6487.chr3.nic	protein_coding	146250960,146223733,146222065,146220815,146206526,146201035,146199813,146196632,146195124,146192339	146251176,146223777,146222092,146220925,146206761,146201077,146200039,146196793,146195282,146194455	Gene ID= ENSG00000114698.14 TPM= 9.49 Transcript Type= NA
chr3	146192339	146251083	146192339	146251083	-	transcript6489.chr3.nic@PLSCR4	transcript6489.chr3.nic	protein_coding	146250960,146250557,146222065,146220815,146206526,146201035,146199813,146196632,146195124,146192339	146251083,146250637,146222092,146220925,146206761,146201077,146200039,146196793,146195282,146194455	Gene ID= ENSG00000114698.14 TPM= 7.16 Transcript Type= NA
chr3	146192339	146251179	146192339	146251179	-	ENST00000354952.6@PLSCR4	ENST00000354952.6	protein_coding	146250960,146222065,146220815,146206526,146201035,146199813,146196632,146195124,146192339	146251179,146222092,146220925,146206761,146201077,146200039,146196793,146195282,146194455	Gene ID= ENSG00000114698.14 TPM= 64.37 Transcript Type= protein_coding
chr3	146515180	146544864	146515180	146544864	-	ENST00000342435.8@PLSCR1	ENST00000342435.8	protein_coding	146544467,146536540,146533470,146528614,146525605,146521833,146521544,146517006,146515180	146544864,146536565,146533550,146528831,146525647,146522053,146521705,146517167,146516101	Gene ID= ENSG00000188313.12 TPM= 168.13 Transcript Type= protein_coding
chr3	146515802	146544555	146515802	146544555	-	ENST00000463777.5@PLSCR1	ENST00000463777.5	protein_coding	146544467,146536540,146533470,146525605,146517006,146515802	146544555,146536565,146533550,146525647,146517167,146516101	Gene ID= ENSG00000188313.12 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr3	148697871	148743003	148697871	148743003	+	ENST00000349243.7@AGTR1	ENST00000349243.7	protein_coding	148697871,148707944,148740989	148698127,148708027,148743003	Gene ID= ENSG00000144891.17 TPM= 10.51 Transcript Type= protein_coding
chr3	148697784	148743003	148697784	148743003	+	ENST00000497524.5@AGTR1	ENST00000497524.5	protein_coding	148697784,148740989	148698127,148743003	Gene ID= ENSG00000144891.17 TPM= 5.84 Transcript Type= protein_coding
chr3	148865256	148897196	148865256	148897196	+	ENST00000296046.3@CPA3	ENST00000296046.3	protein_coding	148865256,148865473,148868915,148878441,148878647,148879788,148881522,148882505,148883613,148886093,148896520	148865375,148865548,148869039,148878543,148878748,148879889,148881632,148882595,148883815,148886177,148897196	Gene ID= ENSG00000163751.3 TPM= 7.01 Transcript Type= protein_coding
chr3	148991452	149027632	148991452	149027632	+	ENST00000296048.10@GYG1	ENST00000296048.10	protein_coding	148991452,148994142,148996302,148996742,149009276,149024053,149026760	148991647,148994277,148996476,148996904,149009402,149024272,149027632	Gene ID= ENSG00000163754.17 TPM= 58.38 Transcript Type= protein_coding
chr3	148991558	149027631	148991558	149027631	+	ENST00000484197.5@GYG1	ENST00000484197.5	protein_coding	148991558,148994142,148996302,148996742,149009276,149026760	148991647,148994277,148996476,148996904,149009402,149027631	Gene ID= ENSG00000163754.17 TPM= 1.17 Transcript Type= protein_coding
chr3	149030127	149086522	149030127	149086522	-	ENST00000465259.5@HLTF	ENST00000465259.5	protein_coding	149086317,149084682,149075881,149074215,149073225,149071583,149071252,149068240,149064791,149063431,149060779,149060643,149059718,149055303,149050232,149048863,149048028,149046080,149042166,149041490,149040031,149039581,149039049,149034918,149030127	149086522,149084889,149076047,149074348,149073322,149071657,149071443,149068335,149064866,149063524,149060858,149060687,149059804,149055400,149050375,149049001,149048163,149046259,149042290,149041668,149040156,149039693,149039229,149034998,149032372	Gene ID= ENSG00000071794.15 TPM= 22.18 Transcript Type= protein_coding
chr3	149129584	149173732	149129584	149173732	+	ENST00000296051.6@HPS3	ENST00000296051.6	protein_coding	149129584,149140004,149141017,149141295,149145354,149150599,149153494,149155107,149157350,149158666,149160046,149162148,149162690,149163842,149167034,149167893,149172095	149129940,149140498,149141188,149141380,149145546,149150680,149153648,149155215,149157531,149158846,149160279,149162333,149162878,149163949,149167240,149167983,149173732	Gene ID= ENSG00000163755.8 TPM= 52.54 Transcript Type= protein_coding
chr3	149129691	149154109	149129691	149154109	+	ENST00000486530.1@HPS3	ENST00000486530.1	protein_coding	149129691,149140004,149141017,149141295,149145354,149150599,149153494	149129940,149140498,149141188,149141380,149145546,149150680,149154109	Gene ID= ENSG00000163755.8 TPM= 3.5 Transcript Type= retained_intron
chr3	149161509	149164778	149161509	149164778	-	transcript6548.chr3.nnic@CP	transcript6548.chr3.nnic	protein_coding	149162680,149161509	149164778,149162323	Gene ID= ENSG00000047457.13 TPM= 2.34 Transcript Type= NA
chr3	149318498	149333761	149318498	149333761	-	ENST00000296059.6@TM4SF18	ENST00000296059.6	protein_coding	149333513,149333206,149330330,149324880,149322256,149318498	149333761,149333399,149330419,149325022,149322436,149321492	Gene ID= ENSG00000163762.6 TPM= 4.67 Transcript Type= protein_coding
chr3	149369019	149373858	149369019	149373858	-	transcript6558.chr3.nnic@NA	transcript6558.chr3.nnic	NA	149369019	149373858	Gene ID= novel_gene_chr3_6559 TPM= 3.5 Transcript Type= NA
chr3	149369022	149377865	149369022	149377865	-	ENST00000305366.7@TM4SF1	ENST00000305366.7	protein_coding	149377371,149375680,149375443,149371687,149369022	149377865,149375769,149375588,149371867,149369880	Gene ID= ENSG00000169908.11 TPM= 402.82 Transcript Type= protein_coding
chr3	149520245	149658101	149520245	149658101	-	ENST00000360632.7@WWTR1	ENST00000360632.7	protein_coding	149657765,149656876,149572864,149542335,149527836,149526013,149520245	149658101,149657309,149573000,149542537,149527969,149526125,149520989	Gene ID= ENSG00000018408.14 TPM= 7.01 Transcript Type= protein_coding
chr3	149656783	149659317	149656783	149659317	+	transcript6568.chr3.nnic@NA	transcript6568.chr3.nnic	NA	149656783	149659317	Gene ID= novel_gene_chr3_6569 TPM= 2.34 Transcript Type= NA
chr3	149738470	149752517	149738470	149752517	-	transcript6577.chr3.nnic@COMMD2	transcript6577.chr3.nnic	protein_coding	149752378,149752210,149751403,149750678,149738470	149752517,149752287,149751485,149750776,149741718	Gene ID= ENSG00000114744.8 TPM= 2.34 Transcript Type= NA
chr3	149738470	149752499	149738470	149752499	-	ENST00000473414.5@COMMD2	ENST00000473414.5	protein_coding	149752378,149752210,149751403,149750678,149738470	149752499,149752287,149751485,149750851,149741718	Gene ID= ENSG00000114744.8 TPM= 44.37 Transcript Type= protein_coding
chr3	149751811	149752489	149751811	149752489	-	ENST00000490008.1@COMMD2	ENST00000490008.1	protein_coding	149752378,149751811	149752489,149752287	Gene ID= ENSG00000114744.8 TPM= 1.17 Transcript Type= retained_intron
chr3	149812735	149962126	149812735	149962126	+	transcript6594.chr3.nnic@RNF13	transcript6594.chr3.nnic	protein_coding	149812735,149814100,149846011,149852516,149872029,149895473,149902072,149911978,149921134,149960056,149960740	149813353,149814331,149846140,149852596,149872154,149895560,149902162,149912083,149921227,149960136,149962126	Gene ID= ENSG00000082996.19 TPM= 11.38 Transcript Type= NA
chr3	149812708	149962139	149812708	149962139	+	ENST00000392894.7@RNF13	ENST00000392894.7	protein_coding	149812708,149846011,149852516,149872029,149895473,149902072,149911978,149921134,149960056,149960740	149813353,149846140,149852596,149872154,149895560,149902162,149912083,149921227,149960136,149962139	Gene ID= ENSG00000082996.19 TPM= 230.31 Transcript Type= protein_coding
chr3	149812770	149962122	149812770	149962122	+	ENST00000344229.7@RNF13	ENST00000344229.7	protein_coding	149812770,149813925,149846011,149852516,149872029,149895473,149902072,149911978,149921134,149960056,149960740	149813353,149814026,149846140,149852596,149872154,149895560,149902162,149912083,149921227,149960136,149962122	Gene ID= ENSG00000082996.19 TPM= 7.01 Transcript Type= protein_coding
chr3	149933265	149935675	149933265	149935675	-	transcript6621.chr3.nnic@NA	transcript6621.chr3.nnic	NA	149933265	149935675	Gene ID= novel_gene_chr3_6622 TPM= 4.67 Transcript Type= NA
chr3	149964904	149970950	149964904	149970950	-	ENST00000452853.6@PFN2	ENST00000452853.6	protein_coding	149970725,149968358,149964904	149970950,149968550,149966264	Gene ID= ENSG00000070087.13 TPM= 40.87 Transcript Type= protein_coding
chr3	149964904	149971109	149964904	149971109	-	ENST00000239940.11@PFN2	ENST00000239940.11	protein_coding	149970725,149968358,149964904	149971109,149968550,149966586	Gene ID= ENSG00000070087.13 TPM= 12.84 Transcript Type= protein_coding
chr3	149966041	149970063	149966041	149970063	+	transcript6627.chr3.nnic@NA	transcript6627.chr3.nnic	NA	149966041	149970063	Gene ID= novel_gene_chr3_6628 TPM= 2.34 Transcript Type= NA
chr3	150408103	150408870	150408103	150408870	-	transcript6646.chr3.nnic@NA	transcript6646.chr3.nnic	NA	150408103	150408870	Gene ID= novel_gene_chr3_6647 TPM= 2.34 Transcript Type= NA
chr3	150409595	150460116	150409595	150460116	+	transcript6636.chr3.nnic@TSC22D2	transcript6636.chr3.nnic	protein_coding	150409595,150438198,150457076,150458376	150411308,150438354,150457127,150460116	Gene ID= ENSG00000196428.12 TPM= 7.59 Transcript Type= NA
chr3	150411009	150460116	150411009	150460116	+	ENST00000466814.1@TSC22D2	ENST00000466814.1	protein_coding	150411009,150457076,150458376	150411308,150457127,150460116	Gene ID= ENSG00000196428.12 TPM= 3.5 Transcript Type= protein_coding
chr3	150408880	150413602	150408880	150413602	+	transcript6642.chr3.nnic@NA	transcript6642.chr3.nnic	NA	150408880	150413602	Gene ID= novel_gene_chr3_6643 TPM= 14.59 Transcript Type= NA
chr3	150565796	150603228	150565796	150603228	-	ENST00000490945.1@SERP1	ENST00000490945.1	protein_coding	150602944,150565796	150603228,150567106	Gene ID= ENSG00000120742.10 TPM= 2.34 Transcript Type= processed_transcript
chr3	150546694	150584242	150546694	150584242	+	ENST00000460851.5@EIF2A	ENST00000460851.5	protein_coding	150546694,150552356,150558388,150562542,150563515,150564299,150567693,150567902,150568176,150571958,150575649,150581618,150583200,150583846	150546830,150552425,150558462,150562660,150563614,150564381,150567766,150568046,150568292,150572529,150575762,150581746,150583265,150584242	Gene ID= ENSG00000144895.11 TPM= 127.27 Transcript Type= protein_coding
chr3	150603288	150630435	150603288	150630435	+	ENST00000471696.5@SELENOT	ENST00000471696.5	protein_coding	150603288,150622385,150623043,150624812,150627010,150627659	150603499,150622495,150623169,150624899,150627163,150630435	Gene ID= ENSG00000198843.12 TPM= 78.23 Transcript Type= protein_coding
chr3	151326312	151329548	151326312	151329548	-	ENST00000325602.5@P2RY13	ENST00000325602.5	protein_coding	151329481,151326312	151329548,151329007	Gene ID= ENSG00000181631.6 TPM= 11.68 Transcript Type= protein_coding
chr3	151433494	151458709	151433494	151458709	-	ENST00000282466.3@IGSF10	ENST00000282466.3	protein_coding	151458516,151457026,151453384,151444919,151442984,151433494	151458709,151457155,151453774,151449265,151443884,151438597	Gene ID= ENSG00000152580.8 TPM= 10.51 Transcript Type= protein_coding
chr3	151787263	151788958	151787263	151788958	+	transcript6701.chr3.nnic@NA	transcript6701.chr3.nnic	NA	151787263	151788958	Gene ID= novel_gene_chr3_6702 TPM= 2.34 Transcript Type= NA
chr3	151814094	151828488	151814094	151828488	+	transcript6704.chr3.nnic@AADAC	transcript6704.chr3.nnic	protein_coding	151814094,151817417,151820383,151824663,151827576	151814300,151817588,151820452,151824834,151828488	Gene ID= ENSG00000114771.13 TPM= 2.34 Transcript Type= NA
chr3	151814037	151828488	151814037	151828488	+	ENST00000232892.11@AADAC	ENST00000232892.11	protein_coding	151814037,151817366,151820383,151824663,151827576	151814300,151817588,151820452,151824834,151828488	Gene ID= ENSG00000114771.13 TPM= 3.5 Transcript Type= protein_coding
chr3	151873643	151884619	151873643	151884619	+	ENST00000362032.6@SUCNR1	ENST00000362032.6	protein_coding	151873643,151879852,151880559	151873706,151879907,151884619	Gene ID= ENSG00000198829.6 TPM= 5.84 Transcript Type= protein_coding
chr3	152268040	152465779	152268040	152465779	+	ENST00000282488.11@MBNL1	ENST00000282488.11	protein_coding	152268040,152299405,152414941,152432717,152445282,152446704,152447620,152455542,152456267,152459271,152462385	152269092,152300367,152415111,152432920,152445539,152446757,152447773,152455577,152456361,152459345,152465779	Gene ID= ENSG00000152601.17 TPM= 10.85 Transcript Type= protein_coding
chr3	152268040	152465779	152268040	152465779	+	ENST00000282486.10@MBNL1	ENST00000282486.10	protein_coding	152268040,152299405,152414941,152432717,152445282,152446704,152447620,152456267,152459271,152462385	152269092,152300367,152415111,152432920,152445539,152446757,152447773,152456361,152459345,152465779	Gene ID= ENSG00000152601.17 TPM= 11.23 Transcript Type= protein_coding
chr3	152268695	152465780	152268695	152465780	+	transcript6722.chr3.nic@MBNL1	transcript6722.chr3.nic	protein_coding	152268695,152414941,152432717,152445282,152447620,152455542,152456267,152459271,152462385	152269092,152415111,152432920,152445539,152447773,152455577,152456361,152459345,152465780	Gene ID= ENSG00000152601.17 TPM= 15.84 Transcript Type= NA
chr3	152269086	152465780	152269086	152465780	+	transcript6724.chr3.nnic@MBNL1	transcript6724.chr3.nnic	protein_coding	152269086,152414941,152432717,152445282,152447620,152455542,152456267,152459271,152462385	152269407,152415111,152432920,152445539,152447773,152455577,152456361,152459345,152465780	Gene ID= ENSG00000152601.17 TPM= 11.17 Transcript Type= NA
chr3	152268319	152465780	152268319	152465780	+	transcript6729.chr3.nic@MBNL1	transcript6729.chr3.nic	protein_coding	152268319,152299405,152414941,152432717,152445282,152447620,152459271,152462385	152269092,152300367,152415111,152432920,152445539,152447773,152459345,152465780	Gene ID= ENSG00000152601.17 TPM= 14.15 Transcript Type= NA
chr3	152268900	152465780	152268900	152465780	+	transcript6730.chr3.nic@MBNL1	transcript6730.chr3.nic	protein_coding	152268900,152414941,152432717,152445282,152447620,152456267,152459271,152462385	152269092,152415111,152432920,152445539,152447773,152456361,152459345,152465780	Gene ID= ENSG00000152601.17 TPM= 6.36 Transcript Type= NA
chr3	152268963	152465763	152268963	152465763	+	ENST00000324210.9@MBNL1	ENST00000324210.9	protein_coding	152268963,152299405,152414941,152432717,152445282,152447620,152455542,152456267,152459271,152462385	152269092,152300367,152415111,152432920,152445539,152447773,152455577,152456361,152459345,152465763	Gene ID= ENSG00000152601.17 TPM= 49.04 Transcript Type= protein_coding
chr3	152314378	152320036	152314378	152320036	-	transcript6749.chr3.nnic@NA	transcript6749.chr3.nnic	NA	152314378	152320036	Gene ID= novel_gene_chr3_6750 TPM= 10.51 Transcript Type= NA
chr3	152834693	152841439	152834693	152841439	+	ENST00000305097.5@P2RY1	ENST00000305097.5	protein_coding	152834693	152841439	Gene ID= ENSG00000169860.6 TPM= 25.69 Transcript Type= protein_coding
chr3	153162136	153164720	153162136	153164720	+	transcript6757.chr3.nnic@NA	transcript6757.chr3.nnic	NA	153162136	153164720	Gene ID= novel_gene_chr3_6758 TPM= 101.58 Transcript Type= NA
chr3	154025113	154121279	154025113	154121279	-	transcript6762.chr3.nnic@ARHGEF26-AS1	transcript6762.chr3.nnic	processed_transcript	154121072,154119686,154108669,154030277,154025113	154121279,154119808,154108785,154030379,154026642	Gene ID= ENSG00000243069.7 TPM= 2.34 Transcript Type= NA
chr3	154121360	154256575	154121360	154256575	+	ENST00000465093.5@ARHGEF26	ENST00000465093.5	protein_coding	154121360,154121942,154124410,154129574,154149389,154152772,154187685,154191289,154194644,154217869,154225856,154240370,154253116,154254720,154255331	154121519,154123075,154124449,154129719,154149445,154152932,154187837,154191418,154194718,154217958,154226010,154240579,154253183,154254824,154256575	Gene ID= ENSG00000114790.12 TPM= 91.15 Transcript Type= protein_coding
chr3	154121384	154256575	154121384	154256575	+	transcript6778.chr3.nic@ARHGEF26	transcript6778.chr3.nic	protein_coding	154121384,154121942,154124410,154129574,154149389,154152772,154187685,154191289,154194644,154217869,154225856,154240370,154253116,154254720	154121519,154123075,154124449,154129719,154149445,154152932,154187837,154191418,154194718,154217958,154226010,154240579,154253183,154256575	Gene ID= ENSG00000114790.12 TPM= 17.4 Transcript Type= NA
chr3	154121384	154256575	154121384	154256575	+	transcript6779.chr3.nic@ARHGEF26	transcript6779.chr3.nic	protein_coding	154121384,154121942,154124410,154129574,154149389,154152772,154187685,154191289,154194644,154217869,154225856,154240370,154253116,154254785	154121519,154123075,154124449,154129719,154149445,154152932,154187837,154191418,154194718,154217958,154226010,154240579,154253183,154256575	Gene ID= ENSG00000114790.12 TPM= 6.89 Transcript Type= NA
chr3	154121384	154256575	154121384	154256575	+	transcript6781.chr3.nnic@ARHGEF26	transcript6781.chr3.nnic	protein_coding	154121384,154121942,154124410,154129574,154149389,154152772,154187685,154191289,154194644,154225856,154240370,154253116,154254720,154255331	154121519,154123075,154124449,154129719,154149445,154152932,154187837,154191418,154194718,154226010,154240579,154253183,154254824,154256575	Gene ID= ENSG00000114790.12 TPM= 5.69 Transcript Type= NA
chr3	154121416	154256548	154121416	154256548	+	ENST00000496710.5@ARHGEF26	ENST00000496710.5	protein_coding	154121416,154121942,154124410,154129574,154149389,154152772,154187685,154191289,154194644,154217869,154225856,154240370,154253116,154254785,154255331	154121519,154123075,154124449,154129719,154149445,154152932,154187837,154191418,154194718,154217958,154226010,154240579,154253183,154254824,154256548	Gene ID= ENSG00000114790.12 TPM= 13.28 Transcript Type= protein_coding
chr3	154130149	154133284	154130149	154133284	-	transcript6792.chr3.nnic@NA	transcript6792.chr3.nnic	NA	154130149	154133284	Gene ID= novel_gene_chr3_6793 TPM= 22.18 Transcript Type= NA
chr3	154140590	154141376	154140590	154141376	-	transcript6794.chr3.nnic@NA	transcript6794.chr3.nnic	NA	154140590	154141376	Gene ID= novel_gene_chr3_6795 TPM= 2.34 Transcript Type= NA
chr3	154301049	154324488	154301049	154324488	-	transcript6789.chr3.nic@DHX36	transcript6789.chr3.nic	protein_coding	154324174,154316039,154315046,154311636,154309653,154306216,154305094,154304806,154303329,154301049	154324488,154316163,154315280,154311674,154309823,154306295,154305168,154304972,154303410,154301127	Gene ID= ENSG00000174953.13 TPM= 7.01 Transcript Type= NA
chr3	155079647	155183708	155079647	155183708	+	ENST00000460393.5@MME	ENST00000460393.5	protein_coding	155079647,155084158,155085059,155114994,155116479,155116664,155116868,155118746,155138102,155140191,155141991,155142237,155143443,155144359,155147144,155148550,155160390,155166902,155168492,155168732,155172117,155172536,155180360	155079756,155084327,155085094,155115155,155116559,155116759,155116986,155118811,155138236,155140292,155142127,155142330,155143571,155144457,155147224,155148653,155160448,155167021,155168625,155168797,155172212,155172612,155183708	Gene ID= ENSG00000196549.10 TPM= 8.17 Transcript Type= protein_coding
chr3	155079858	155183708	155079858	155183708	+	transcript6801.chr3.nic@MME	transcript6801.chr3.nic	protein_coding	155079858,155084158,155085059,155114994,155116479,155116664,155116868,155118746,155138102,155140191,155141991,155142237,155143443,155144359,155147144,155148550,155160390,155166902,155168492,155168732,155172117,155172536,155180360	155080001,155084327,155085094,155115155,155116559,155116759,155116986,155118811,155138236,155140292,155142127,155142330,155143571,155144457,155147224,155148653,155160448,155167021,155168625,155168797,155172212,155172612,155183708	Gene ID= ENSG00000196549.10 TPM= 17.51 Transcript Type= NA
chr3	155079858	155088699	155079858	155088699	+	transcript6811.chr3.nic@MME	transcript6811.chr3.nic	protein_coding	155079858,155084158,155085059	155080001,155084327,155088699	Gene ID= ENSG00000196549.10 TPM= 2.34 Transcript Type= NA
chr3	155080094	155181584	155080094	155181584	+	ENST00000462745.5@MME	ENST00000462745.5	protein_coding	155080094,155084158,155085059,155114994,155116479,155116664,155116868,155118746,155138102,155140191,155141991,155142237,155143443,155144359,155147144,155148550,155160390,155166902,155168492,155168732,155172117,155172536,155180360	155080295,155084327,155085094,155115155,155116559,155116759,155116986,155118811,155138236,155140292,155142127,155142330,155143571,155144457,155147224,155148653,155160448,155167021,155168625,155168797,155172212,155172612,155181584	Gene ID= ENSG00000196549.10 TPM= 2.34 Transcript Type= protein_coding
chr3	155479881	155745067	155479881	155745067	-	ENST00000460012.5@PLCH1	ENST00000460012.5	protein_coding	155744840,155704146,155596232,155593941,155586065,155583472,155568231,155564915,155554076,155549787,155523897,155514723,155504555,155500703,155497320,155494338,155494141,155492729,155490784,155488660,155488028,155485356,155479881	155745067,155704264,155596378,155594184,155586194,155583642,155568324,155565118,155554196,155549958,155524004,155514884,155504626,155500794,155497417,155494517,155494248,155492853,155490868,155488806,155488107,155485710,155483051	Gene ID= ENSG00000114805.16 TPM= 3.5 Transcript Type= protein_coding
chr3	155712676	155715656	155712676	155715656	+	transcript6816.chr3.nnic@NA	transcript6816.chr3.nnic	NA	155712676	155715656	Gene ID= novel_gene_chr3_6817 TPM= 2.34 Transcript Type= NA
chr3	155735903	155737247	155735903	155737247	+	transcript6814.chr3.nnic@NA	transcript6814.chr3.nnic	NA	155735903	155737247	Gene ID= novel_gene_chr3_6815 TPM= 4.67 Transcript Type= NA
chr3	155762617	155806351	155762617	155806351	-	ENST00000340171.6@C3orf33	ENST00000340171.6	protein_coding	155806139,155802532,155775701,155767509,155762617	155806351,155802591,155775848,155767669,155763918	Gene ID= ENSG00000174928.15 TPM= 9.34 Transcript Type= protein_coding
chr3	155762617	155806266	155762617	155806266	-	ENST00000482061.6@C3orf33	ENST00000482061.6	protein_coding	155806139,155805597,155802532,155775701,155767509,155762617	155806266,155805723,155802591,155775848,155767669,155763918	Gene ID= ENSG00000174928.15 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr3	155826520	155854412	155826520	155854412	-	transcript6828.chr3.nic@SLC33A1	transcript6828.chr3.nic	protein_coding	155853223,155842432,155833468,155829688,155826520	155854412,155842619,155834041,155829903,155828377	Gene ID= ENSG00000169359.13 TPM= 2.92 Transcript Type= NA
chr3	155826520	155854389	155826520	155854389	-	transcript6831.chr3.nic@SLC33A1	transcript6831.chr3.nic	protein_coding	155853223,155842432,155829688,155826520	155854389,155842619,155829903,155828377	Gene ID= ENSG00000169359.13 TPM= 2.92 Transcript Type= NA
chr3	155826526	155854429	155826526	155854429	-	ENST00000359479.7@SLC33A1	ENST00000359479.7	protein_coding	155853223,155842432,155833857,155833468,155829688,155828182,155826526	155854429,155842619,155834041,155833585,155829903,155828377,155826819	Gene ID= ENSG00000169359.13 TPM= 2.34 Transcript Type= protein_coding
chr3	155942306	155943734	155942306	155943734	+	transcript6840.chr3.nnic@NA	transcript6840.chr3.nnic	NA	155942306	155943734	Gene ID= novel_gene_chr3_6841 TPM= 2.34 Transcript Type= NA
chr3	156421614	156538604	156421614	156538604	+	transcript6842.chr3.nic@KCNAB1	transcript6842.chr3.nic	protein_coding	156421614,156452899,156457453,156459827,156463702,156465643,156474734,156514364,156515100,156516270,156523827,156531409,156536658	156421659,156452936,156457532,156459871,156463746,156465686,156474820,156514449,156515220,156516364,156523947,156531497,156538604	Gene ID= ENSG00000169282.17 TPM= 5.84 Transcript Type= NA
chr3	156525783	156529502	156525783	156529502	+	transcript6856.chr3.nnic@NA	transcript6856.chr3.nnic	NA	156525783	156529502	Gene ID= novel_gene_chr3_6857 TPM= 2.34 Transcript Type= NA
chr3	156538149	156540483	156538149	156540483	-	transcript6858.chr3.nnic@NA	transcript6858.chr3.nnic	NA	156538149	156540483	Gene ID= novel_gene_chr3_6859 TPM= 2.34 Transcript Type= NA
chr3	156540140	156555184	156540140	156555184	-	ENST00000265044.6@SSR3	ENST00000265044.6	protein_coding	156554957,156553655,156548905,156544308,156540140	156555184,156553781,156549003,156544439,156543269	Gene ID= ENSG00000114850.6 TPM= 119.09 Transcript Type= protein_coding
chr3	156543004	156555125	156543004	156555125	-	ENST00000476217.5@SSR3	ENST00000476217.5	protein_coding	156554957,156553655,156548905,156544294,156543004	156555125,156553781,156549003,156544439,156543269	Gene ID= ENSG00000114850.6 TPM= 39.7 Transcript Type= protein_coding
chr3	156671862	156674378	156671862	156674378	-	ENST00000492937.1@TIPARP-AS1	ENST00000492937.1	antisense_RNA	156674207,156671862	156674378,156672130	Gene ID= ENSG00000243926.1 TPM= 1.17 Transcript Type= antisense_RNA
chr3	156674342	156706770	156674342	156706770	+	ENST00000295924.11@TIPARP	ENST00000295924.11	protein_coding	156674342,156677657,156694020,156695865,156703424,156704684	156674796,156678614,156694188,156696025,156703702,156706770	Gene ID= ENSG00000163659.12 TPM= 7.01 Transcript Type= protein_coding
chr3	156697424	156701811	156697424	156701811	-	transcript6870.chr3.nnic@NA	transcript6870.chr3.nnic	NA	156697424	156701811	Gene ID= novel_gene_chr3_6871 TPM= 9.34 Transcript Type= NA
chr3	156747346	156817034	156747346	156817034	-	ENST00000472943.5@LINC00886	ENST00000472943.5	lincRNA	156816887,156751095,156747346	156817034,156751183,156750414	Gene ID= ENSG00000240875.5 TPM= 2.34 Transcript Type= lincRNA
chr3	157147796	157160363	157147796	157160363	-	ENST00000631619.1@CCNL1	ENST00000631619.1	protein_coding	157159792,157159405,157158866,157156936,157153036,157152177,157151917,157150282,157150065,157149836,157149485,157149287,157147796	157160363,157159479,157158975,157157083,157153156,157152241,157151930,157150381,157150169,157149977,157149596,157149385,157148589	Gene ID= ENSG00000163660.11 TPM= 3.64 Transcript Type= nonsense_mediated_decay
chr3	157147796	157160197	157147796	157160197	-	transcript6877.chr3.nic@CCNL1	transcript6877.chr3.nic	protein_coding	157159792,157159405,157158866,157157011,157153036,157152177,157151917,157150282,157150065,157149836,157149485,157149287,157147796	157160197,157159479,157158975,157157083,157153156,157152241,157151930,157150381,157150169,157149977,157149596,157149385,157148589	Gene ID= ENSG00000163660.11 TPM= 3.64 Transcript Type= NA
chr3	157147739	157160197	157147739	157160197	-	transcript6879.chr3.nic@CCNL1	transcript6879.chr3.nic	protein_coding	157159792,157159405,157158866,157156936,157153036,157152177,157150282,157150065,157149836,157149485,157149287,157147739	157160197,157159479,157158975,157157083,157153156,157152241,157151930,157150169,157149977,157149596,157149385,157148589	Gene ID= ENSG00000163660.11 TPM= 3.74 Transcript Type= NA
chr3	157147739	157160197	157147739	157160197	-	transcript6880.chr3.nic@CCNL1	transcript6880.chr3.nic	protein_coding	157159792,157159405,157158866,157157011,157153036,157152177,157150282,157150065,157149836,157149485,157149287,157147739	157160197,157159479,157158975,157157083,157153156,157152241,157151930,157150169,157149977,157149596,157149385,157148589	Gene ID= ENSG00000163660.11 TPM= 3.74 Transcript Type= NA
chr3	157147796	157160197	157147796	157160197	-	transcript6883.chr3.nic@CCNL1	transcript6883.chr3.nic	protein_coding	157159792,157159405,157158866,157153036,157152177,157151917,157150282,157150065,157149836,157149485,157149287,157147796	157160197,157159479,157158975,157157083,157152241,157151930,157150381,157150169,157149977,157149596,157149385,157148589	Gene ID= ENSG00000163660.11 TPM= 5.84 Transcript Type= NA
chr3	157146508	157160760	157146508	157160760	-	ENST00000461804.5@CCNL1	ENST00000461804.5	protein_coding	157159792,157159405,157158866,157153036,157152177,157150282,157150065,157149836,157149485,157149287,157146508	157160760,157159479,157158975,157153156,157152241,157150381,157150169,157149977,157149596,157149385,157146607	Gene ID= ENSG00000163660.11 TPM= 5.98 Transcript Type= protein_coding
chr3	157147553	157160213	157147553	157160213	-	ENST00000295926.7@CCNL1	ENST00000295926.7	protein_coding	157159792,157159405,157158866,157153036,157152177,157150282,157150065,157149836,157149485,157149287,157147553	157160213,157159479,157158975,157153156,157152241,157150381,157150169,157149977,157149596,157149385,157148589	Gene ID= ENSG00000163660.11 TPM= 5.98 Transcript Type= protein_coding
chr3	157147739	157160145	157147739	157160145	-	transcript6889.chr3.nic@CCNL1	transcript6889.chr3.nic	protein_coding	157159792,157159405,157158866,157153036,157152177,157150282,157150065,157149836,157149485,157149287,157147739	157160145,157159479,157158975,157153156,157152241,157151930,157150169,157149977,157149596,157149385,157148589	Gene ID= ENSG00000163660.11 TPM= 3.74 Transcript Type= NA
chr3	157147739	157160197	157147739	157160197	-	transcript6890.chr3.nic@CCNL1	transcript6890.chr3.nic	protein_coding	157159792,157159405,157158866,157157011,157153036,157150282,157150065,157149836,157149485,157149287,157147739	157160197,157159479,157158975,157157083,157153156,157152241,157150169,157149977,157149596,157149385,157148589	Gene ID= ENSG00000163660.11 TPM= 7.24 Transcript Type= NA
chr3	157147739	157160197	157147739	157160197	-	transcript6897.chr3.nic@CCNL1	transcript6897.chr3.nic	protein_coding	157159792,157159405,157158866,157153036,157150282,157150065,157149836,157149485,157149287,157147739	157160197,157159479,157158975,157153156,157152241,157150169,157149977,157149596,157149385,157148589	Gene ID= ENSG00000163660.11 TPM= 6.07 Transcript Type= NA
chr3	157159624	157162510	157159624	157162510	+	transcript6913.chr3.nnic@NA	transcript6913.chr3.nnic	NA	157159624	157162510	Gene ID= novel_gene_chr3_6914 TPM= 3.64 Transcript Type= NA
chr3	157259742	157503481	157259742	157503481	-	transcript6919.chr3.nic@VEPH1	transcript6919.chr3.nic	protein_coding	157503277,157495212,157493187,157489055,157470314,157460181,157428322,157413881,157381156,157364303,157363364,157317062,157313621,157286557,157265526,157259742	157503481,157495506,157493293,157489160,157470529,157460355,157428488,157414090,157381376,157364512,157363761,157317201,157313755,157286674,157265662,157261370	Gene ID= ENSG00000197415.11 TPM= 4.23 Transcript Type= NA
chr3	157259742	157503481	157259742	157503481	-	transcript6923.chr3.nic@VEPH1	transcript6923.chr3.nic	protein_coding	157503277,157495212,157489055,157470314,157460181,157428322,157413881,157381156,157364303,157363364,157317062,157313621,157286557,157265526,157259742	157503481,157495506,157489160,157470529,157460355,157428488,157414090,157381376,157364512,157363761,157317201,157313755,157286674,157265662,157261370	Gene ID= ENSG00000197415.11 TPM= 13.57 Transcript Type= NA
chr3	157259742	157503426	157259742	157503426	-	transcript6927.chr3.nnic@VEPH1	transcript6927.chr3.nnic	protein_coding	157503277,157499395,157495212,157470314,157460181,157428322,157413881,157381156,157364303,157363364,157317062,157313621,157286557,157265526,157259742	157503426,157499656,157495506,157470529,157460355,157428488,157414090,157381376,157364512,157363761,157317201,157313755,157286674,157265662,157261370	Gene ID= ENSG00000197415.11 TPM= 5.39 Transcript Type= NA
chr3	157259742	157504188	157259742	157504188	-	transcript6931.chr3.nic@VEPH1	transcript6931.chr3.nic	protein_coding	157503471,157495212,157470314,157460181,157428322,157413881,157381156,157364303,157363364,157317062,157313621,157286557,157265526,157259742	157504188,157495506,157470529,157460355,157428488,157414090,157381376,157364512,157363761,157317201,157313755,157286674,157265662,157261370	Gene ID= ENSG00000197415.11 TPM= 17.07 Transcript Type= NA
chr3	157259742	157503339	157259742	157503339	-	ENST00000392833.6@VEPH1	ENST00000392833.6	protein_coding	157503277,157495212,157470314,157460181,157428322,157413881,157381156,157364303,157363364,157317062,157286557,157265526,157259742	157503339,157495506,157470529,157460355,157428488,157414090,157381376,157364512,157363761,157317201,157286674,157265662,157261370	Gene ID= ENSG00000197415.11 TPM= 4.23 Transcript Type= protein_coding
chr3	157259742	157503427	157259742	157503427	-	ENST00000362010.6@VEPH1	ENST00000362010.6	protein_coding	157503277,157495212,157470314,157460181,157428322,157413881,157381156,157364303,157363364,157317062,157313621,157286557,157265526,157259742	157503427,157495506,157470529,157460355,157428488,157414090,157381376,157364512,157363761,157317201,157313755,157286674,157265662,157261370	Gene ID= ENSG00000197415.11 TPM= 46.26 Transcript Type= protein_coding
chr3	157436789	157443628	157436789	157443628	+	ENST00000295927.3@PTX3	ENST00000295927.3	protein_coding	157436789,157437513,157442366	157437063,157437914,157443628	Gene ID= ENSG00000163661.3 TPM= 9.34 Transcript Type= protein_coding
chr3	157499254	157503416	157499254	157503416	-	transcript6947.chr3.nnic@NA	transcript6947.chr3.nnic	NA	157499254	157503416	Gene ID= novel_gene_chr3_6948 TPM= 4.67 Transcript Type= NA
chr3	157543344	157569912	157543344	157569912	+	ENST00000468043.5@PQLC2L	ENST00000468043.5	protein_coding	157543344,157553230,157569307	157543509,157553340,157569912	Gene ID= ENSG00000174899.10 TPM= 1.17 Transcript Type= protein_coding
chr3	158097159	158106160	158097159	158106160	-	ENST00000389589.8@SHOX2	ENST00000389589.8	protein_coding	158105679,158105058,158102678,158100254,158099860,158097159	158106160,158105129,158102886,158100311,158099948,158098320	Gene ID= ENSG00000168779.19 TPM= 1.17 Transcript Type= protein_coding
chr3	158110052	158544835	158110052	158544835	+	ENST00000295930.7@RSRC1	ENST00000295930.7	protein_coding	158110052,158122103,158123866,158203072,158298039,158354857,158460935,158537092,158543335,158544183	158110211,158122298,158123991,158203245,158298075,158354908,158461003,158537198,158543487,158544835	Gene ID= ENSG00000174891.12 TPM= 4.67 Transcript Type= protein_coding
chr3	158110068	158460962	158110068	158460962	+	ENST00000471994.5@RSRC1	ENST00000471994.5	protein_coding	158110068,158122103,158123866,158203072,158298039,158354857,158460935	158110223,158122298,158123991,158203245,158298075,158354908,158460962	Gene ID= ENSG00000174891.12 TPM= 1.17 Transcript Type= protein_coding
chr3	158571173	158605397	158571173	158605397	+	ENST00000484955.5@MLF1	ENST00000484955.5	protein_coding	158571173,158588852,158592434,158596862,158598080,158600014,158602807,158605097	158571391,158588924,158592581,158596945,158598208,158600173,158602939,158605397	Gene ID= ENSG00000178053.17 TPM= 1.17 Transcript Type= protein_coding
chr3	158571163	158606460	158571163	158606460	+	ENST00000355893.9@MLF1	ENST00000355893.9	protein_coding	158571163,158592434,158596862,158598080,158600014,158602807,158605097	158571347,158592581,158596945,158598208,158600173,158602939,158606460	Gene ID= ENSG00000178053.17 TPM= 8.17 Transcript Type= protein_coding
chr3	158571184	158606456	158571184	158606456	+	ENST00000359117.9@MLF1	ENST00000359117.9	protein_coding	158571184,158592434,158596862,158598080,158600014,158602807,158605097	158571391,158592581,158596945,158598208,158600173,158602939,158606456	Gene ID= ENSG00000178053.17 TPM= 8.17 Transcript Type= protein_coding
chr3	158644278	158692575	158644278	158692575	+	ENST00000486715.5@GFM1	ENST00000486715.5	protein_coding	158644278,158645629,158646165,158646743,158649041,158652096,158653310,158654547,158658922,158660874,158662628,158665337,158666304,158681995,158684524,158690163,158691139,158691336	158644715,158645781,158646297,158646947,158649157,158652246,158653467,158654631,158659059,158660975,158662684,158665474,158666386,158682157,158684668,158690323,158691192,158692575	Gene ID= ENSG00000168827.14 TPM= 70.06 Transcript Type= protein_coding
chr3	158644518	158692572	158644518	158692572	+	transcript6985.chr3.nic@GFM1	transcript6985.chr3.nic	protein_coding	158644518,158645629,158646165,158646743,158649041,158652096,158653310,158654547,158658922,158660874,158662628,158665337,158666304,158681995,158684524,158691139,158691336	158644715,158645781,158646297,158646947,158649157,158652246,158653467,158654631,158659059,158660975,158662684,158665474,158666386,158682157,158684668,158691192,158692572	Gene ID= ENSG00000168827.14 TPM= 2.34 Transcript Type= NA
chr3	158666414	158672693	158666414	158672693	-	ENST00000264265.3@LXN	ENST00000264265.3	protein_coding	158672350,158670957,158669433,158668996,158667012,158666414	158672693,158671019,158669610,158669132,158667074,158666744	Gene ID= ENSG00000079257.7 TPM= 26.85 Transcript Type= protein_coding
chr3	158697108	158732718	158697108	158732718	-	transcript6990.chr3.nnic@RARRES1	transcript6990.chr3.nnic	protein_coding	158732140,158713797,158710738,158704791,158697908,158697108	158732718,158713859,158710921,158704927,158697970,158697827	Gene ID= ENSG00000118849.9 TPM= 19.85 Transcript Type= NA
chr3	158704651	158732442	158704651	158732442	-	ENST00000479756.1@RARRES1	ENST00000479756.1	protein_coding	158732140,158713797,158710738,158704651	158732442,158713859,158710933,158704927	Gene ID= ENSG00000118849.9 TPM= 2.34 Transcript Type= protein_coding
chr3	158724095	158728222	158724095	158728222	+	transcript6998.chr3.nnic@NA	transcript6998.chr3.nnic	NA	158724095	158728222	Gene ID= novel_gene_chr3_6999 TPM= 3.5 Transcript Type= NA
chr3	158802051	158829716	158802051	158829716	+	ENST00000484166.5@MFSD1	ENST00000484166.5	protein_coding	158802051,158804319,158807040,158807396,158809179,158813965,158819649,158820215,158821597,158821984,158823428,158824124,158826015,158827280,158828979	158802315,158804371,158807082,158807463,158809287,158814067,158819747,158820326,158821653,158822140,158823525,158824236,158826062,158827337,158829716	Gene ID= ENSG00000118855.18 TPM= 17.51 Transcript Type= nonsense_mediated_decay
chr3	158802091	158829116	158802091	158829116	+	ENST00000264266.12@MFSD1	ENST00000264266.12	protein_coding	158802091,158804319,158805362,158807040,158807396,158809179,158813965,158819649,158820215,158821597,158821984,158823428,158824124,158826015,158827280,158828979	158802315,158804371,158805474,158807082,158807463,158809287,158814067,158819747,158820326,158821653,158822140,158823525,158824236,158826062,158827337,158829116	Gene ID= ENSG00000118855.18 TPM= 14.01 Transcript Type= protein_coding
chr3	159732353	159897360	159732353	159897360	+	transcript7013.chr3.nnic@IQCJ-SCHIP1	transcript7013.chr3.nnic	protein_coding	159732353,159764443,159866163,159886207,159887708,159888820,159892097,159896723	159732414,159765138,159866281,159886324,159887905,159888943,159892190,159897360	Gene ID= ENSG00000283154.2 TPM= 5.45 Transcript Type= NA
chr3	159763695	159897360	159763695	159897360	+	transcript7017.chr3.nic@IQCJ-SCHIP1	transcript7017.chr3.nic	protein_coding	159763695,159764443,159866163,159886207,159887708,159888820,159892097,159896723	159763890,159765138,159866281,159886324,159887905,159888943,159892190,159897360	Gene ID= ENSG00000283154.2 TPM= 6.62 Transcript Type= NA
chr3	159764093	159897360	159764093	159897360	+	transcript7018.chr3.nic@IQCJ-SCHIP1	transcript7018.chr3.nic	protein_coding	159764093,159764443,159866163,159886207,159887708,159888820,159892097,159896723	159764224,159765138,159866281,159886324,159887905,159888943,159892190,159897360	Gene ID= ENSG00000283154.2 TPM= 15.96 Transcript Type= NA
chr3	159839861	159897360	159839861	159897360	+	ENST00000445224.6@SCHIP1	ENST00000445224.6	protein_coding	159839861,159866163,159886207,159887708,159888820,159892097,159896723	159840214,159866281,159886324,159887905,159888943,159892190,159897360	Gene ID= ENSG00000151967.18 TPM= 9.34 Transcript Type= protein_coding
chr3	160225496	160228213	160225496	160228213	+	ENST00000326474.4@C3orf80	ENST00000326474.4	protein_coding	160225496	160228213	Gene ID= ENSG00000180044.5 TPM= 5.84 Transcript Type= protein_coding
chr3	160256992	160371285	160256992	160371285	-	transcript7045.chr3.nnic@AC079594.2	transcript7045.chr3.nnic	protein_coding	160371167,160366043,160357489,160356013,160319760,160307663,160303915,160300883,160285804,160282478,160280667,160279193,160277581,160277306,160268413,160256992	160371285,160366152,160357578,160356150,160319939,160307781,160303989,160301046,160285868,160282613,160280814,160279364,160277670,160277478,160268536,160258635	Gene ID= ENSG00000248710.1 TPM= 2.34 Transcript Type= NA
chr3	160256992	160399179	160256992	160399179	-	transcript7036.chr3.nnic@IFT80	transcript7036.chr3.nnic	protein_coding	160399146,160384406,160383437,160381503,160377430,160375812,160366043,160357489,160356013,160319760,160307663,160303915,160300883,160285804,160282478,160280667,160279193,160277581,160277306,160274530,160268413,160256992	160399179,160384646,160383504,160381718,160377540,160375880,160366152,160357578,160356150,160319939,160307781,160303989,160301046,160285868,160282613,160280814,160279364,160277670,160277478,160274577,160268536,160258635	Gene ID= ENSG00000068885.14 TPM= 2.34 Transcript Type= NA
chr3	160256986	160399532	160256986	160399532	-	ENST00000326448.11@IFT80	ENST00000326448.11	protein_coding	160399146,160384564,160381503,160377430,160375812,160366043,160357489,160356013,160319760,160307663,160303915,160300883,160285804,160282478,160280667,160279193,160277581,160277306,160268413,160256986	160399532,160384646,160381724,160377540,160375880,160366152,160357578,160356150,160319939,160307781,160303989,160301046,160285868,160282613,160280814,160279364,160277670,160277478,160268536,160258635	Gene ID= ENSG00000068885.14 TPM= 8.17 Transcript Type= protein_coding
chr3	160382087	160384260	160382087	160384260	+	transcript7056.chr3.nnic@NA	transcript7056.chr3.nnic	NA	160382087	160384260	Gene ID= novel_gene_chr3_7057 TPM= 4.67 Transcript Type= NA
chr3	160399626	160416337	160399626	160416337	+	transcript7050.chr3.nic@SMC4	transcript7050.chr3.nic	protein_coding	160399626,160400822,160401915,160402676,160404328,160411920,160412326,160413473,160414367,160416251	160399749,160400965,160402093,160402867,160404504,160412084,160412453,160413613,160414517,160416337	Gene ID= ENSG00000113810.15 TPM= 10.51 Transcript Type= NA
chr3	160399668	160433990	160399668	160433990	+	ENST00000462787.5@SMC4	ENST00000462787.5	protein_coding	160399668,160401915,160402676,160404328,160411920,160412326,160413473,160414367,160416251,160417723,160419358,160420740,160423425,160423761,160424867,160426074,160428753,160430599,160431643,160432283,160433026,160433657	160400965,160402093,160402867,160404504,160412084,160412453,160413613,160414517,160416415,160417956,160419543,160420901,160423650,160423840,160425019,160426200,160428942,160430743,160431825,160432515,160433209,160433990	Gene ID= ENSG00000113810.15 TPM= 2.34 Transcript Type= protein_coding
chr3	160399650	160433910	160399650	160433910	+	ENST00000469762.5@SMC4	ENST00000469762.5	protein_coding	160399650,160400822,160401990,160402676,160404328,160411920,160412326,160413473,160414367,160416251,160417723,160419358,160420740,160423425,160423761,160424867,160426074,160428753,160430599,160431032,160431643,160432283,160433026,160433657	160399749,160400965,160402093,160402867,160404504,160412084,160412453,160413613,160414517,160416415,160417956,160419543,160420901,160423650,160423840,160425019,160426200,160428942,160430743,160431205,160431825,160432515,160433209,160433910	Gene ID= ENSG00000113810.15 TPM= 2.34 Transcript Type= protein_coding
chr3	160565745	160569490	160565745	160569490	+	transcript7067.chr3.nic@KRT8P12	transcript7067.chr3.nic	transcribed_processed_pseudogene	160565745,160567543	160566153,160569490	Gene ID= ENSG00000229320.3 TPM= 2.34 Transcript Type= NA
chr3	160753428	160755142	160753428	160755142	-	ENST00000566372.1@AC069224.1	ENST00000566372.1	antisense_RNA	160753428	160755142	Gene ID= ENSG00000260572.1 TPM= 1.17 Transcript Type= antisense_RNA
chr3	161084263	161105065	161084263	161105065	-	transcript7078.chr3.nic@B3GALNT1	transcript7078.chr3.nic	protein_coding	161104785,161104319,161103427,161103113,161101139,161084263	161105065,161104406,161103517,161103205,161101233,161086788	Gene ID= ENSG00000169255.13 TPM= 3.5 Transcript Type= NA
chr3	161083883	161105324	161083883	161105324	-	ENST00000320474.8@B3GALNT1	ENST00000320474.8	protein_coding	161105235,161104319,161103427,161101139,161083883	161105324,161104406,161103517,161101233,161086788	Gene ID= ENSG00000169255.13 TPM= 4.67 Transcript Type= protein_coding
chr3	161221269	161252307	161221269	161252307	+	transcript7102.chr3.nic@NMD3	transcript7102.chr3.nic	protein_coding	161221269,161221994,161224930,161227247,161233399,161234727,161235122,161238113,161238730,161241046,161242508,161246336,161247258,161249454,161250256,161250780	161221331,161222057,161225064,161227343,161233479,161234855,161235212,161238191,161238826,161241163,161242653,161246448,161247330,161249560,161250326,161252307	Gene ID= ENSG00000169251.12 TPM= 18.3 Transcript Type= NA
chr3	161221290	161252307	161221290	161252307	+	ENST00000351193.6@NMD3	ENST00000351193.6	protein_coding	161221290,161221994,161224930,161227247,161233399,161234727,161235122,161238113,161238730,161241046,161242508,161246336,161247258,161249454,161250256,161250780	161221409,161222057,161225064,161227343,161233479,161234855,161235212,161238191,161238826,161241163,161242653,161246448,161247330,161249560,161250326,161252307	Gene ID= ENSG00000169251.12 TPM= 63.83 Transcript Type= protein_coding
chr3	161240528	161243659	161240528	161243659	-	transcript7115.chr3.nnic@NA	transcript7115.chr3.nnic	NA	161240528	161243659	Gene ID= novel_gene_chr3_7116 TPM= 2.34 Transcript Type= NA
chr3	165772904	165837472	165772904	165837472	-	ENST00000264381.7@BCHE	ENST00000264381.7	protein_coding	165837314,165829517,165786145,165772904	165837472,165831041,165786311,165773506	Gene ID= ENSG00000114200.9 TPM= 12.84 Transcript Type= protein_coding
chr3	167683910	167734939	167683910	167734939	-	ENST00000473645.6@PDCD10	ENST00000473645.6	protein_coding	167734806,167725401,167720062,167704842,167697009,167695596,167687615,167687234,167683910	167734939,167725473,167720273,167704895,167697126,167695722,167687693,167687316,167684389	Gene ID= ENSG00000114209.14 TPM= 14.01 Transcript Type= protein_coding
chr3	167683912	167734930	167683912	167734930	-	ENST00000497056.6@PDCD10	ENST00000497056.6	protein_coding	167734806,167720062,167704842,167697009,167695596,167687615,167687234,167683912	167734930,167720273,167704895,167697126,167695722,167687693,167687316,167684389	Gene ID= ENSG00000114209.14 TPM= 35.03 Transcript Type= protein_coding
chr3	167735430	167825568	167735430	167825568	+	ENST00000446050.6@SERPINI1	ENST00000446050.6	protein_coding	167735430,167789111,167790372,167792590,167794620,167807244,167822986,167824473,167825247	167735823,167789378,167790602,167792784,167794824,167807341,167823072,167824562,167825568	Gene ID= ENSG00000163536.12 TPM= 7.01 Transcript Type= protein_coding
chr3	168008677	168095975	168008677	168095975	-	ENST00000470487.5@GOLIM4	ENST00000470487.5	protein_coding	168095099,168048291,168046950,168044828,168043379,168041392,168040786,168036836,168032520,168029780,168029223,168027728,168024928,168024526,168010743,168008677	168095975,168048365,168046999,168044881,168043529,168041474,168040869,168036994,168032852,168030036,168029302,168027837,168025095,168024594,168010823,168010418	Gene ID= ENSG00000173905.8 TPM= 52.54 Transcript Type= protein_coding
chr3	169083507	169147428	169083507	169147428	-	transcript7141.chr3.nic@MECOM	transcript7141.chr3.nic	protein_coding	169146723,169143698,169131429,169127844,169122580,169121056,169115383,169112787,169107926,169102060,169100885,169095076,169092958,169090000,169089000,169083507	169147428,169143832,169131531,169128060,169122727,169121209,169116739,169112874,169107952,169102226,169100962,169095245,169093102,169090236,169089183,169085043	Gene ID= ENSG00000085276.17 TPM= 6.42 Transcript Type= NA
chr3	169084744	169381524	169084744	169381524	-	transcript7148.chr3.nic@MECOM	transcript7148.chr3.nic	protein_coding	169381187,169143698,169131429,169127844,169122580,169121056,169115383,169112787,169107926,169102060,169100885,169095076,169092958,169090000,169089000,169084744	169381524,169143832,169131531,169128060,169122727,169121209,169116739,169112874,169107952,169102226,169100962,169095245,169093102,169090236,169089183,169085043	Gene ID= ENSG00000085276.17 TPM= 5.25 Transcript Type= NA
chr3	169084744	169146536	169084744	169146536	-	transcript7149.chr3.nic@MECOM	transcript7149.chr3.nic	protein_coding	169146477,169143698,169131429,169127844,169122580,169121056,169115383,169112787,169107926,169102060,169100885,169095076,169092958,169090000,169089000,169084744	169146536,169143832,169131531,169128060,169122727,169121212,169116739,169112874,169107952,169102226,169100962,169095245,169093102,169090236,169089183,169085043	Gene ID= ENSG00000085276.17 TPM= 4.29 Transcript Type= NA
chr3	169083507	169147734	169083507	169147734	-	ENST00000464456.5@MECOM	ENST00000464456.5	protein_coding	169146723,169143698,169131429,169127844,169122580,169121056,169115383,169112787,169102060,169100885,169095076,169092958,169090000,169089000,169083507	169147734,169143832,169131531,169128060,169122727,169121209,169116739,169112874,169102226,169100962,169095245,169093102,169090236,169089183,169085043	Gene ID= ENSG00000085276.17 TPM= 8.76 Transcript Type= protein_coding
chr3	169215244	169218914	169215244	169218914	-	transcript7167.chr3.nnic@NA	transcript7167.chr3.nnic	NA	169215244	169218914	Gene ID= novel_gene_chr3_7168 TPM= 2.34 Transcript Type= NA
chr3	169766921	169769895	169766921	169769895	-	ENST00000330368.2@ACTRT3	ENST00000330368.2	protein_coding	169769321,169766921	169769895,169768350	Gene ID= ENSG00000184378.2 TPM= 1.17 Transcript Type= protein_coding
chr3	169773405	169786826	169773405	169786826	+	transcript7183.chr3.nic@MYNN	transcript7183.chr3.nic	protein_coding	169773405,169774265,169778768,169780590,169782465,169786416	169773462,169774561,169779561,169780749,169784708,169786826	Gene ID= ENSG00000085274.15 TPM= 2.34 Transcript Type= NA
chr3	169773385	169775707	169773385	169775707	+	transcript7184.chr3.nic@MYNN	transcript7184.chr3.nic	protein_coding	169773385,169774265	169773462,169775707	Gene ID= ENSG00000085274.15 TPM= 2.34 Transcript Type= NA
chr3	169773427	169787544	169773427	169787544	+	ENST00000356716.8@MYNN	ENST00000356716.8	protein_coding	169773427,169774031,169774265,169778768,169780590,169782465,169783477,169784622,169786416	169773462,169774097,169774561,169779561,169780749,169782643,169783560,169784708,169787544	Gene ID= ENSG00000085274.15 TPM= 3.5 Transcript Type= protein_coding
chr3	169966765	169998373	169966765	169998373	+	ENST00000337002.8@SEC62	ENST00000337002.8	protein_coding	169966765,169975608,169976946,169982707,169983161,169985805,169988240,169992594	169966858,169975716,169977051,169982911,169983253,169985865,169988359,169998373	Gene ID= ENSG00000008952.16 TPM= 21.02 Transcript Type= protein_coding
chr3	170038197	170085403	170038197	170085403	+	transcript7216.chr3.nic@GPR160	transcript7216.chr3.nic	protein_coding	170038197,170038915,170079774,170083905	170038470,170039043,170079897,170085403	Gene ID= ENSG00000173890.16 TPM= 4.67 Transcript Type= NA
chr3	170082975	170086420	170082975	170086420	-	transcript7221.chr3.nnic@NA	transcript7221.chr3.nnic	NA	170082975	170086420	Gene ID= novel_gene_chr3_7222 TPM= 2.34 Transcript Type= NA
chr3	170087584	170181747	170087584	170181747	-	ENST00000495893.6@PHC3	ENST00000495893.6	protein_coding	170181702,170178773,170172557,170171373,170149086,170145423,170136419,170128684,170122591,170117226,170113360,170106832,170102802,170102479,170087584	170181747,170178938,170172712,170171450,170149244,170145521,170136665,170129552,170122744,170117476,170113519,170106946,170102934,170102710,170097384	Gene ID= ENSG00000173889.15 TPM= 38.53 Transcript Type= protein_coding
chr3	170095221	170181733	170095221	170181733	-	ENST00000494943.5@PHC3	ENST00000494943.5	protein_coding	170181687,170178773,170172557,170171373,170149086,170145423,170136419,170128684,170122591,170117226,170113360,170106832,170102802,170102479,170095221	170181733,170178938,170172712,170171450,170149244,170145521,170136665,170129552,170122744,170117476,170113519,170106946,170102934,170102710,170097384	Gene ID= ENSG00000173889.15 TPM= 5.84 Transcript Type= protein_coding
chr3	170222335	170305977	170222335	170305977	+	transcript7228.chr3.nnic@PRKCI	transcript7228.chr3.nnic	protein_coding	170222335,170235230,170259969,170263379,170267915,170270421,170273286,170275229,170280227,170281166,170281882,170284461,170285770,170291854,170293383,170295911,170297304,170298995,170303040	170222770,170235351,170260058,170263429,170268000,170270561,170273340,170275287,170280403,170281263,170281968,170284596,170285886,170291941,170293508,170295990,170297393,170299110,170305977	Gene ID= ENSG00000163558.12 TPM= 5.25 Transcript Type= NA
chr3	170222365	170305981	170222365	170305981	+	ENST00000295797.4@PRKCI	ENST00000295797.4	protein_coding	170222365,170235230,170259969,170263379,170267915,170270421,170273286,170275229,170280227,170281166,170281882,170284461,170291854,170293383,170295911,170297304,170298995,170303040	170222770,170235351,170260058,170263429,170268000,170270561,170273340,170275287,170280403,170281263,170281968,170284596,170291941,170293508,170295990,170297393,170299110,170305981	Gene ID= ENSG00000163558.12 TPM= 64.8 Transcript Type= protein_coding
chr3	170357701	170359609	170357701	170359609	+	transcript7251.chr3.nnic@NA	transcript7251.chr3.nnic	NA	170357701	170359609	Gene ID= novel_gene_chr3_7252 TPM= 7.01 Transcript Type= NA
chr3	170421218	170434092	170421218	170434092	+	ENST00000489485.5@CLDN11	ENST00000489485.5	protein_coding	170421218,170423163,170432524	170421337,170423327,170434092	Gene ID= ENSG00000013297.10 TPM= 14.01 Transcript Type= processed_transcript
chr3	170864875	170870483	170864875	170870483	-	ENST00000295830.12@RPL22L1	ENST00000295830.12	protein_coding	170870159,170868298,170868013,170864875	170870483,170868390,170868134,170866524	Gene ID= ENSG00000163584.17 TPM= 2.34 Transcript Type= protein_coding
chr3	170866263	170870195	170866263	170870195	-	ENST00000475836.5@RPL22L1	ENST00000475836.5	protein_coding	170870159,170868298,170868013,170866263	170870195,170868390,170868201,170866524	Gene ID= ENSG00000163584.17 TPM= 6.62 Transcript Type= nonsense_mediated_decay
chr3	170866267	170870208	170866267	170870208	-	ENST00000494771.5@RPL22L1	ENST00000494771.5	protein_coding	170870159,170868298,170868013,170866267	170870208,170868387,170868201,170866524	Gene ID= ENSG00000163584.17 TPM= 3.12 Transcript Type= nonsense_mediated_decay
chr3	170866268	170870195	170866268	170870195	-	ENST00000463836.1@RPL22L1	ENST00000463836.1	protein_coding	170870159,170868298,170868013,170866268	170870195,170868387,170868134,170866524	Gene ID= ENSG00000163584.17 TPM= 5.45 Transcript Type= protein_coding
chr3	170888415	170908693	170888415	170908693	-	ENST00000295822.6@EIF5A2	ENST00000295822.6	protein_coding	170908543,170907642,170906989,170894292,170888415	170908693,170907841,170907093,170894423,170893419	Gene ID= ENSG00000163577.7 TPM= 3.5 Transcript Type= protein_coding
chr3	172039562	172230354	172039562	172230354	+	transcript7293.chr3.nic@FNDC3B	transcript7293.chr3.nic	protein_coding	172039562,172112452,172133471,172226871	172039771,172112590,172133546,172230354	Gene ID= ENSG00000075420.12 TPM= 3.89 Transcript Type= NA
chr3	172039628	172398771	172039628	172398771	+	ENST00000415807.6@FNDC3B	ENST00000415807.6	protein_coding	172039628,172112452,172133471,172226871,172247533,172251260,172285926,172295363,172298728,172307363,172310828,172328952,172330541,172333089,172334944,172337330,172341113,172343011,172344086,172346327,172347212,172352803,172362633,172378270,172380966,172397164	172039771,172112590,172133546,172226947,172247776,172251541,172285984,172295514,172298787,172307501,172310881,172329076,172330715,172333175,172335082,172337401,172341231,172343116,172344258,172346440,172347361,172353083,172362845,172378436,172381093,172398771	Gene ID= ENSG00000075420.12 TPM= 14.4 Transcript Type= protein_coding
chr3	172039628	172187298	172039628	172187298	+	ENST00000421757.5@FNDC3B	ENST00000421757.5	protein_coding	172039628,172112452,172133471,172186712	172039771,172112590,172133546,172187298	Gene ID= ENSG00000075420.12 TPM= 2.72 Transcript Type= protein_coding
chr3	172042833	172044653	172042833	172044653	-	transcript7300.chr3.nnic@NA	transcript7300.chr3.nnic	NA	172042833	172044653	Gene ID= novel_gene_chr3_7301 TPM= 5.84 Transcript Type= NA
chr3	172505508	172523507	172505508	172523507	-	ENST00000241261.6@TNFSF10	ENST00000241261.6	protein_coding	172523253,172514861,172511617,172509217,172505508	172523507,172514998,172511659,172509321,172506919	Gene ID= ENSG00000121858.10 TPM= 75.89 Transcript Type= protein_coding
chr3	172505662	172523475	172505662	172523475	-	ENST00000420541.6@TNFSF10	ENST00000420541.6	protein_coding	172523253,172514861,172505662	172523475,172514998,172506919	Gene ID= ENSG00000121858.10 TPM= 1.17 Transcript Type= protein_coding
chr3	172630645	172711218	172630645	172711218	-	ENST00000538775.5@NCEH1	ENST00000538775.5	protein_coding	172710847,172647862,172645623,172635916,172630645	172711218,172648114,172645692,172636087,172634092	Gene ID= ENSG00000144959.9 TPM= 3.5 Transcript Type= protein_coding
chr3	172630249	172711218	172630249	172711218	-	ENST00000475381.5@NCEH1	ENST00000475381.5	protein_coding	172710847,172647886,172645623,172635916,172630249	172711218,172648114,172645692,172636087,172634092	Gene ID= ENSG00000144959.9 TPM= 37.36 Transcript Type= protein_coding
chr3	172684757	172689361	172684757	172689361	+	transcript7316.chr3.nnic@NA	transcript7316.chr3.nnic	NA	172684757	172689361	Gene ID= novel_gene_chr3_7317 TPM= 3.5 Transcript Type= NA
chr3	177023339	177197396	177023339	177197396	-	ENST00000457928.6@TBL1XR1	ENST00000457928.6	protein_coding	177197121,177098466,177064920,177053773,177051504,177050478,177049997,177047486,177047300,177046129,177038313,177038098,177034198,177032971,177026373,177023339	177197396,177098541,177065022,177053918,177051726,177050610,177050138,177047549,177047397,177046189,177038434,177038172,177034325,177033136,177026474,177025524	Gene ID= ENSG00000177565.16 TPM= 7.01 Transcript Type= protein_coding
chr3	177122679	177126826	177122679	177126826	+	transcript7337.chr3.nnic@NA	transcript7337.chr3.nnic	NA	177122679	177126826	Gene ID= novel_gene_chr3_7338 TPM= 2.34 Transcript Type= NA
chr3	178807338	178844428	178807338	178844428	+	ENST00000358316.7@KCNMB2	ENST00000358316.7	protein_coding	178807338,178825588,178828178,178842653	178807465,178825758,178828373,178844428	Gene ID= ENSG00000197584.11 TPM= 1.17 Transcript Type= protein_coding
chr3	179017223	179072279	179017223	179072279	-	ENST00000311417.6@ZMAT3	ENST00000311417.6	protein_coding	179071595,179067483,179030880,179027646,179027423,179017223	179072279,179067809,179030999,179027812,179027523,179025228	Gene ID= ENSG00000172667.10 TPM= 18.68 Transcript Type= protein_coding
chr3	179023739	179072215	179023739	179072215	-	ENST00000432729.5@ZMAT3	ENST00000432729.5	protein_coding	179071595,179071327,179067483,179030880,179027646,179027423,179023739	179072215,179071447,179067809,179030999,179027812,179027523,179025225	Gene ID= ENSG00000172667.10 TPM= 1.17 Transcript Type= protein_coding
chr3	179148176	179148272	179148176	179148272	+	transcript7361.chr3.nnic@NA	transcript7361.chr3.nnic	NA	179148176	179148272	Gene ID= novel_gene_chr3_7362 TPM= 2.34 Transcript Type= NA
chr3	179259720	179261460	179259720	179261460	-	transcript7364.chr3.nnic@NA	transcript7364.chr3.nnic	NA	179259720	179261460	Gene ID= novel_gene_chr3_7365 TPM= 2.34 Transcript Type= NA
chr3	179323062	179334612	179323062	179334612	+	transcript7393.chr3.nic@ZNF639	transcript7393.chr3.nic	protein_coding	179323062,179325042,179327561,179328283,179329618,179329934,179332989,179333269	179323291,179325322,179327631,179328351,179329728,179330055,179333123,179334612	Gene ID= ENSG00000121864.9 TPM= 2.34 Transcript Type= NA
chr3	179322991	179334614	179322991	179334614	+	ENST00000496856.5@ZNF639	ENST00000496856.5	protein_coding	179322991,179327561,179328283,179329618,179332989,179333269	179323291,179327631,179328351,179329728,179333123,179334614	Gene ID= ENSG00000121864.9 TPM= 5.84 Transcript Type= protein_coding
chr3	179347692	179394931	179347692	179394931	+	ENST00000471841.5@MFN1	ENST00000471841.5	protein_coding	179347692,179348845,179351900,179358840,179362358,179364297,179365118,179367439,179368036,179375220,179377042,179377344,179378341,179378585,179385569,179386433,179390004,179391981	179347810,179348963,179352035,179359002,179362482,179364405,179365225,179367592,179368103,179375341,179377168,179377448,179378443,179378814,179385721,179386629,179390138,179394931	Gene ID= ENSG00000171109.18 TPM= 16.35 Transcript Type= protein_coding
chr3	179396088	179451480	179396088	179451480	-	transcript7375.chr3.nnic@GNB4	transcript7375.chr3.nnic	protein_coding	179451346,179426144,179420889,179419399,179416493,179414885,179413715,179413412,179405190,179399452,179396088	179451480,179426242,179420927,179419505,179416556,179415047,179413781,179413613,179405406,179401319,179397977	Gene ID= ENSG00000114450.9 TPM= 6.04 Transcript Type= NA
chr3	179396089	179451468	179396089	179451468	-	transcript7376.chr3.nnic@GNB4	transcript7376.chr3.nnic	protein_coding	179451346,179426144,179420889,179419399,179416493,179414885,179413715,179413412,179405190,179399402,179396089	179451468,179426242,179420927,179419505,179416556,179415047,179413781,179413613,179405406,179401319,179397932	Gene ID= ENSG00000114450.9 TPM= 4.29 Transcript Type= NA
chr3	179396089	179451590	179396089	179451590	-	ENST00000232564.7@GNB4	ENST00000232564.7	protein_coding	179451346,179426144,179420889,179419399,179416493,179414885,179413715,179413412,179405190,179396089	179451590,179426242,179420927,179419505,179416556,179415047,179413781,179413613,179405406,179401319	Gene ID= ENSG00000114450.9 TPM= 8.37 Transcript Type= protein_coding
chr3	179404924	179451473	179404924	179451473	-	transcript7390.chr3.nic@GNB4	transcript7390.chr3.nic	protein_coding	179451346,179426144,179420889,179419399,179416493,179414885,179413715,179413412,179404924	179451473,179426242,179420927,179419505,179416556,179415047,179413781,179413613,179405406	Gene ID= ENSG00000114450.9 TPM= 2.34 Transcript Type= NA
chr3	179562880	179588408	179562880	179588408	+	ENST00000429709.6@ACTL6A	ENST00000429709.6	protein_coding	179562880,179569824,179570067,179573369,179574370,179576217,179576620,179576824,179580640,179580894,179581140,179583353,179586546,179587930	179563117,179569900,179570241,179573469,179574467,179576311,179576726,179576913,179580701,179581008,179581220,179583448,179586632,179588408	Gene ID= ENSG00000136518.16 TPM= 37.36 Transcript Type= protein_coding
chr3	179562886	179588407	179562886	179588407	+	ENST00000450518.6@ACTL6A	ENST00000450518.6	protein_coding	179562886,179569824,179570067,179573369,179574370,179576217,179576620,179576824,179580640,179580894,179581140,179583353,179586546,179587930	179562973,179569900,179570241,179573469,179574467,179576311,179576726,179576913,179580701,179581008,179581220,179583448,179586632,179588407	Gene ID= ENSG00000136518.16 TPM= 10.51 Transcript Type= protein_coding
chr3	179588831	179604653	179588831	179604653	-	transcript7427.chr3.nnic@MRPL47	transcript7427.chr3.nnic	protein_coding	179604527,179603413,179602652,179601730,179598675,179593765,179592644,179588831	179604653,179603535,179602797,179601790,179598771,179593895,179592739,179588995	Gene ID= ENSG00000136522.13 TPM= 2.34 Transcript Type= NA
chr3	179588285	179604654	179588285	179604654	-	ENST00000476781.5@MRPL47	ENST00000476781.5	protein_coding	179604527,179602652,179601730,179598675,179593765,179592644,179588285	179604654,179602797,179601790,179598771,179593895,179592739,179588995	Gene ID= ENSG00000136522.13 TPM= 2.34 Transcript Type= protein_coding
chr3	179604702	179624497	179604702	179624497	+	ENST00000259037.7@NDUFB5	ENST00000259037.7	protein_coding	179604702,179614971,179615983,179616983,179618415,179623920	179604939,179615059,179616049,179617044,179618521,179624497	Gene ID= ENSG00000136521.12 TPM= 30.36 Transcript Type= protein_coding
chr3	179604791	179627647	179604791	179627647	+	ENST00000493866.5@NDUFB5	ENST00000493866.5	protein_coding	179604791,179616983,179618415,179623920	179604939,179617044,179618521,179627647	Gene ID= ENSG00000136521.12 TPM= 8.17 Transcript Type= protein_coding
chr3	179652755	179789401	179652755	179789401	+	ENST00000263966.7@USP13	ENST00000263966.7	protein_coding	179652755,179681878,179690241,179701008,179706934,179708773,179719940,179721402,179730189,179730616,179740247,179742197,179745043,179752285,179754732,179757052,179761112,179764002,179765695,179781739,179784048	179653393,179682003,179690301,179701129,179707076,179708957,179720034,179721589,179730260,179730709,179740372,179742350,179745217,179752373,179754854,179757078,179761255,179764168,179765848,179781823,179789401	Gene ID= ENSG00000058056.8 TPM= 21.02 Transcript Type= protein_coding
chr3	180602193	180610974	180602193	180610974	+	transcript7462.chr3.nnic@TTC14	transcript7462.chr3.nnic	protein_coding	180602193,180602891,180603124,180604225,180604478,180605766,180606253,180606481,180607648	180602422,180603015,180603323,180604309,180604607,180605837,180606372,180606603,180610974	Gene ID= ENSG00000163728.10 TPM= 2.34 Transcript Type= NA
chr3	180602130	180610978	180602130	180610978	+	ENST00000296015.8@TTC14	ENST00000296015.8	protein_coding	180602130,180602891,180603124,180604225,180604478,180604852,180605766,180606253,180606481,180607648,180608701,180609630	180602422,180603015,180603323,180604309,180604607,180605007,180605837,180606372,180606603,180607765,180608810,180610978	Gene ID= ENSG00000163728.10 TPM= 12.84 Transcript Type= protein_coding
chr3	180602193	180610974	180602193	180610974	+	ENST00000412756.6@TTC14	ENST00000412756.6	protein_coding	180602193,180602891,180603124,180604225,180604478,180604852,180605766,180606253,180606481,180607648	180602422,180603015,180603323,180604309,180604607,180605007,180605837,180606372,180606603,180610974	Gene ID= ENSG00000163728.10 TPM= 21.02 Transcript Type= protein_coding
chr3	180602211	180617828	180602211	180617828	+	ENST00000382584.8@TTC14	ENST00000382584.8	protein_coding	180602211,180602891,180603124,180604225,180604478,180604852,180605766,180606253,180606481,180607648,180608701,180609630,180617380	180602422,180603015,180603323,180604309,180604607,180605007,180605837,180606372,180606603,180607765,180608810,180610003,180617828	Gene ID= ENSG00000163728.10 TPM= 1.17 Transcript Type= protein_coding
chr3	180912302	180982753	180912302	180982753	+	ENST00000357559.8@FXR1	ENST00000357559.8	protein_coding	180912302,180933334,180935138,180947865,180948347,180948721,180949227,180951298,180953762,180957819,180961468,180962883,180963028,180968051,180970158,180975313,180976122	180912736,180933386,180935231,180947936,180948495,180948814,180949343,180951468,180953840,180957928,180961554,180962940,180963090,180968254,180970358,180975404,180982753	Gene ID= ENSG00000114416.17 TPM= 9.34 Transcript Type= protein_coding
chr3	180912671	180976579	180912671	180976579	+	transcript7470.chr3.nic@FXR1	transcript7470.chr3.nic	protein_coding	180912671,180933334,180935138,180947865,180948347,180948721,180949227,180951298,180953762,180957819,180961468,180962883,180968051,180970158,180975313,180976122	180912736,180933386,180935231,180947936,180948495,180948814,180949343,180951468,180953840,180957928,180961554,180963090,180968254,180970358,180975404,180976579	Gene ID= ENSG00000114416.17 TPM= 2.92 Transcript Type= NA
chr3	180912670	180971897	180912670	180971897	+	transcript7472.chr3.nic@FXR1	transcript7472.chr3.nic	protein_coding	180912670,180933334,180935138,180947865,180948347,180948721,180949227,180951298,180953762,180957819,180961468,180962883,180963028,180968051,180970158	180912736,180933386,180935231,180947936,180948495,180948814,180949343,180951468,180953840,180957928,180961554,180962940,180963090,180968254,180971897	Gene ID= ENSG00000114416.17 TPM= 2.34 Transcript Type= NA
chr3	180912678	180976553	180912678	180976553	+	ENST00000472339.5@FXR1	ENST00000472339.5	protein_coding	180912678,180933334,180935138,180947865,180948347,180948721,180949227,180951298,180953762,180957819,180961468,180962883,180968051,180970158,180976122	180912736,180933386,180935231,180947936,180948495,180948814,180949343,180951468,180953840,180957928,180961554,180963090,180968254,180970358,180976553	Gene ID= ENSG00000114416.17 TPM= 6.42 Transcript Type= retained_intron
chr3	180983709	180989773	180983709	180989773	-	ENST00000382564.6@DNAJC19	ENST00000382564.6	protein_coding	180989600,180988178,180988023,180986943,180985926,180983709	180989773,180988229,180988096,180987022,180985996,180984710	Gene ID= ENSG00000205981.6 TPM= 12.84 Transcript Type= protein_coding
chr3	180989793	181181362	180989793	181181362	+	transcript7492.chr3.nnic@SOX2-OT	transcript7492.chr3.nnic	sense_overlapping	180989793,181088877,181175514	180989840,181088917,181181362	Gene ID= ENSG00000242808.7 TPM= 2.34 Transcript Type= NA
chr3	182793451	182914660	182793451	182914660	+	transcript7503.chr3.nic@ATP11B	transcript7503.chr3.nic	protein_coding	182793451,182820260,182828120,182829672,182836035,182836342,182837071,182842075,182845458,182848476,182857878,182859162,182865456,182866268,182867376,182869078,182869228,182872356,182873812,182879496,182880879,182884753,182885951,182887586,182889410,182896700,182897303,182898607,182913861	182793786,182820376,182828209,182829752,182836142,182836470,182837174,182842122,182845522,182848557,182858028,182859359,182865698,182866443,182867444,182869151,182869331,182872537,182874015,182879649,182880981,182884898,182886010,182887713,182889548,182896765,182897406,182898772,182914660	Gene ID= ENSG00000058063.15 TPM= 5.84 Transcript Type= NA
chr3	182793500	182921635	182793500	182921635	+	ENST00000323116.9@ATP11B	ENST00000323116.9	protein_coding	182793500,182820260,182828120,182829672,182836035,182836342,182837071,182842075,182845458,182848476,182857878,182859162,182865456,182866268,182867376,182869078,182869228,182872356,182873812,182879496,182880879,182884753,182885951,182887586,182889410,182896700,182897303,182898607,182913861,182918023	182793786,182820376,182828209,182829752,182836142,182836470,182837174,182842122,182845522,182848557,182858028,182859359,182865698,182866443,182867444,182869151,182869331,182872537,182874015,182879649,182880981,182884898,182886010,182887713,182889548,182896765,182897406,182898772,182913994,182921635	Gene ID= ENSG00000058063.15 TPM= 16.35 Transcript Type= protein_coding
chr3	182938421	182942696	182938421	182942696	-	transcript7516.chr3.nnic@NA	transcript7516.chr3.nnic	NA	182938421	182942696	Gene ID= novel_gene_chr3_7517 TPM= 3.5 Transcript Type= NA
chr3	183015218	183099587	183015218	183099587	-	ENST00000265594.8@MCCC1	ENST00000265594.8	protein_coding	183099352,183094559,183092409,183086693,183072366,183071210,183070999,183057311,183052159,183045413,183041567,183039026,183037218,183033991,183025755,183022417,183020130,183017266,183015218	183099587,183094605,183092545,183086788,183072487,183071357,183071120,183057422,183052240,183045540,183041750,183039135,183037434,183034077,183025804,183022554,183020237,183017337,183015566	Gene ID= ENSG00000078070.12 TPM= 98.66 Transcript Type= protein_coding
chr3	183015218	183099481	183015218	183099481	-	transcript7523.chr3.nic@MCCC1	transcript7523.chr3.nic	protein_coding	183099352,183094559,183086693,183072366,183071210,183070999,183057311,183052159,183045413,183041567,183039026,183037218,183033991,183025755,183022417,183020130,183017266,183015218	183099481,183094605,183086788,183072487,183071357,183071120,183057422,183052240,183045540,183041750,183039135,183037434,183034077,183025804,183022554,183020237,183017337,183015566	Gene ID= ENSG00000078070.12 TPM= 5.25 Transcript Type= NA
chr3	183036538	183099518	183036538	183099518	-	transcript7531.chr3.nic@MCCC1	transcript7531.chr3.nic	protein_coding	183099352,183094559,183086693,183072366,183071210,183070999,183057311,183052159,183045413,183041567,183036538	183099518,183094605,183086788,183072487,183071357,183071120,183057422,183052240,183045540,183041750,183039135	Gene ID= ENSG00000078070.12 TPM= 3.5 Transcript Type= NA
chr3	183122213	183162911	183122213	183162911	-	ENST00000265598.7@LAMP3	ENST00000265598.7	protein_coding	183162607,183153682,183152375,183140538,183135717,183122213	183162911,183154391,183152503,183140595,183135887,183124214	Gene ID= ENSG00000078081.7 TPM= 478.46 Transcript Type= protein_coding
chr3	183126784	183130955	183126784	183130955	-	transcript7550.chr3.nnic@NA	transcript7550.chr3.nnic	NA	183126784	183130955	Gene ID= novel_gene_chr3_7551 TPM= 3.5 Transcript Type= NA
chr3	183254274	183273388	183254274	183273388	+	transcript7555.chr3.nnic@B3GNT5	transcript7555.chr3.nnic	protein_coding	183254274,183269498	183254504,183273388	Gene ID= ENSG00000176597.11 TPM= 2.34 Transcript Type= NA
chr3	183253244	183273391	183253244	183273391	+	ENST00000326505.3@B3GNT5	ENST00000326505.3	protein_coding	183253244,183269498	183253472,183273391	Gene ID= ENSG00000176597.11 TPM= 25.69 Transcript Type= protein_coding
chr3	183447608	183456013	183447608	183456013	+	ENST00000471496.5@LINC00888	ENST00000471496.5	transcribed_unprocessed_pseudogene	183447608,183452078,183454012,183455199	183447765,183452512,183454093,183456013	Gene ID= ENSG00000240024.5 TPM= 2.34 Transcript Type= processed_transcript
chr3	183447651	183455625	183447651	183455625	+	ENST00000468380.1@LINC00888	ENST00000468380.1	transcribed_unprocessed_pseudogene	183447651,183452078,183454012,183455199	183447947,183452512,183454093,183455625	Gene ID= ENSG00000240024.5 TPM= 1.17 Transcript Type= processed_transcript
chr3	183487531	183555706	183487531	183555706	-	transcript7562.chr3.nnic@KLHL6	transcript7562.chr3.nnic	protein_coding	183555361,183527845,183508059,183499590,183494079,183492494,183491418,183487531	183555706,183528010,183508508,183499827,183494281,183492707,183492228,183490572	Gene ID= ENSG00000172578.11 TPM= 15.18 Transcript Type= NA
chr3	183491011	183555700	183491011	183555700	-	transcript7569.chr3.nic@KLHL6	transcript7569.chr3.nic	protein_coding	183555361,183527845,183508059,183499590,183491011	183555700,183528010,183508508,183499827,183494281	Gene ID= ENSG00000172578.11 TPM= 2.34 Transcript Type= NA
chr3	183635623	183684477	183635623	183684477	+	ENST00000454652.6@KLHL24	ENST00000454652.6	protein_coding	183635623,183636221,183643480,183650296,183663458,183664921,183671034,183672296,183679086	183635793,183636311,183643542,183651276,183663642,183665039,183671222,183672484,183684477	Gene ID= ENSG00000114796.15 TPM= 4.67 Transcript Type= protein_coding
chr3	183635620	183684477	183635620	183684477	+	transcript7587.chr3.nic@KLHL24	transcript7587.chr3.nic	protein_coding	183635620,183643480,183650296,183663458,183664921,183671034,183672296,183679086	183635747,183643542,183651276,183663642,183665039,183671222,183672484,183684477	Gene ID= ENSG00000114796.15 TPM= 7.01 Transcript Type= NA
chr3	183635618	183673234	183635618	183673234	+	transcript7593.chr3.nic@KLHL24	transcript7593.chr3.nic	protein_coding	183635618,183643480,183650296,183663458,183664921,183671034,183672296	183635793,183643542,183651276,183663642,183665039,183671222,183673234	Gene ID= ENSG00000114796.15 TPM= 3.5 Transcript Type= NA
chr3	183635623	183680941	183635623	183680941	+	transcript7596.chr3.nic@KLHL24	transcript7596.chr3.nic	protein_coding	183635623,183650296,183663458,183664921,183671034,183672296,183679086	183635793,183651276,183663642,183665039,183671222,183672484,183680941	Gene ID= ENSG00000114796.15 TPM= 3.5 Transcript Type= NA
chr3	183697818	183812625	183697818	183812625	+	ENST00000305135.9@YEATS2	ENST00000305135.9	protein_coding	183697818,183715144,183717651,183718500,183721891,183724419,183728690,183736718,183747672,183752073,183754126,183756528,183758862,183761507,183762097,183772305,183773633,183775915,183777542,183786125,183790797,183797923,183798891,183800466,183801455,183803256,183803987,183806866,183808030,183809097,183810475	183697993,183715262,183717748,183718592,183722136,183724531,183728851,183736829,183747716,183752253,183754365,183756689,183758965,183761614,183762279,183772563,183773794,183776123,183777700,183786301,183790980,183798051,183798989,183800568,183801528,183803335,183804188,183807092,183808104,183809170,183812625	Gene ID= ENSG00000163872.15 TPM= 18.68 Transcript Type= protein_coding
chr3	183815876	183825578	183815876	183825578	-	ENST00000318631.7@MAP6D1	ENST00000318631.7	protein_coding	183825147,183817994,183815876	183825578,183818111,183817436	Gene ID= ENSG00000180834.7 TPM= 2.34 Transcript Type= protein_coding
chr3	183829385	183884907	183829385	183884907	-	ENST00000317096.8@PARL	ENST00000317096.8	protein_coding	183884722,183867865,183866625,183862753,183844231,183842298,183840570,183833724,183833492,183829385	183884907,183868060,183866765,183862801,183844326,183842447,183840640,183833825,183833589,183829709	Gene ID= ENSG00000175193.13 TPM= 34.25 Transcript Type= protein_coding
chr3	183829390	183884888	183829390	183884888	-	ENST00000311101.9@PARL	ENST00000311101.9	protein_coding	183884722,183867865,183866625,183862753,183844231,183840570,183833724,183833492,183829390	183884888,183868060,183866765,183862801,183844326,183840640,183833825,183833589,183829709	Gene ID= ENSG00000175193.13 TPM= 2.72 Transcript Type= protein_coding
chr3	183829397	183884855	183829397	183884855	-	ENST00000435888.5@PARL	ENST00000435888.5	protein_coding	183884722,183867865,183866625,183862753,183844231,183840570,183833492,183829397	183884855,183868060,183866765,183862801,183844326,183840640,183833589,183829709	Gene ID= ENSG00000175193.13 TPM= 1.55 Transcript Type= protein_coding
chr3	183919934	184018015	183919934	184018015	-	ENST00000334444.10@ABCC5	ENST00000334444.10	protein_coding	184017830,184014264,183989226,183988572,183987770,183982774,183982451,183981727,183978503,183977517,183971563,183967695,183965377,183965185,183963385,183961511,183959733,183953086,183951857,183951441,183949972,183949753,183947324,183945850,183942727,183937901,183928747,183927330,183925555,183919934	184018015,184014447,183989383,183988727,183987917,183983007,183982624,183981874,183978651,183977624,183971919,183967766,183965501,183965257,183963588,183961654,183959835,183953270,183952003,183951570,183950125,183949881,183947510,183945939,183942916,183938060,183928825,183927443,183925719,183921401	Gene ID= ENSG00000114770.16 TPM= 15.18 Transcript Type= protein_coding
chr3	184000663	184017939	184000663	184017939	-	ENST00000446941.2@ABCC5	ENST00000446941.2	protein_coding	184017830,184014264,184000663	184017939,184014447,184001251	Gene ID= ENSG00000114770.16 TPM= 2.34 Transcript Type= protein_coding
chr3	183983753	184017889	183983753	184017889	-	ENST00000382494.6@ABCC5	ENST00000382494.6	protein_coding	184017830,184014264,183989226,183988572,183987770,183985304,183983753	184017889,184014447,183989383,183988727,183987917,183985378,183984894	Gene ID= ENSG00000114770.16 TPM= 4.67 Transcript Type= protein_coding
chr3	183983753	184017863	183983753	184017863	-	ENST00000427120.6@ABCC5	ENST00000427120.6	protein_coding	184017830,184014264,183989226,183988572,183983753	184017863,184014447,183989383,183988727,183987917	Gene ID= ENSG00000114770.16 TPM= 7.01 Transcript Type= protein_coding
chr3	184135378	184145311	184135378	184145311	+	transcript7640.chr3.nic@EIF2B5	transcript7640.chr3.nic	protein_coding	184135378,184136612,184137620,184137898,184138166,184140080,184140418,184141925,184142237,184142502,184142779,184143052,184143442,184144597,184144884	184135580,184136736,184137805,184138075,184138246,184140157,184140730,184142070,184142378,184142603,184142886,184143142,184144224,184144707,184145311	Gene ID= ENSG00000145191.12 TPM= 4.09 Transcript Type= NA
chr3	184135377	184145311	184135377	184145311	+	transcript7645.chr3.nic@EIF2B5	transcript7645.chr3.nic	protein_coding	184135377,184136612,184137620,184137898,184138166,184140080,184140418,184141925,184142237,184142502,184142779,184143052,184144597,184144884	184135580,184136736,184137805,184138075,184138246,184140157,184140730,184142070,184142378,184142603,184142886,184144224,184144707,184145311	Gene ID= ENSG00000145191.12 TPM= 4.09 Transcript Type= NA
chr3	184135264	184145310	184135264	184145310	+	ENST00000273783.7@EIF2B5	ENST00000273783.7	protein_coding	184135264,184136612,184137620,184137898,184138166,184140080,184140418,184141925,184142237,184142502,184142779,184143052,184143442,184144099,184144597,184144884	184135580,184136736,184137805,184138075,184138246,184140157,184140730,184142070,184142378,184142603,184142886,184143142,184143565,184144224,184144707,184145310	Gene ID= ENSG00000145191.12 TPM= 100.41 Transcript Type= protein_coding
chr3	184155388	184173610	184155388	184173610	+	ENST00000313143.7@DVL3	ENST00000313143.7	protein_coding	184155388,184163657,184164267,184164492,184164796,184165113,184165422,184166126,184166446,184166606,184166826,184167580,184167898,184170006,184170319	184155796,184163726,184164388,184164601,184164931,184165206,184165491,184166265,184166522,184166673,184166975,184167711,184168065,184170221,184173610	Gene ID= ENSG00000161202.17 TPM= 36.43 Transcript Type= protein_coding
chr3	184174689	184184091	184174689	184184091	+	ENST00000382456.7@AP2M1	ENST00000382456.7	protein_coding	184174689,184176951,184178857,184180169,184180849,184181085,184181696,184181912,184182151,184182757,184183482	184174959,184177067,184179122,184180251,184180984,184181226,184181815,184182047,184182248,184182868,184184091	Gene ID= ENSG00000161203.13 TPM= 635.75 Transcript Type= protein_coding
chr3	184186023	184194007	184186023	184194007	+	ENST00000429586.6@ABCF3	ENST00000429586.6	protein_coding	184186023,184186507,184186796,184187397,184187664,184187861,184188141,184188761,184188929,184189088,184189255,184189388,184189557,184189855,184190999,184191123,184192601,184192805,184193102,184193365,184193540	184186280,184186654,184186875,184187443,184187761,184187983,184188407,184188841,184188988,184189144,184189277,184189443,184189757,184189931,184191043,184191255,184192689,184192896,184193234,184193452,184194007	Gene ID= ENSG00000161204.11 TPM= 105.08 Transcript Type= protein_coding
chr3	184186191	184194005	184186191	184194005	+	transcript7706.chr3.nic@ABCF3	transcript7706.chr3.nic	protein_coding	184186191,184186507,184186796,184187397,184187861,184188141,184188761,184188929,184189088,184189255,184189388,184189557,184189855,184190999,184191123,184192601,184192805,184193102,184193365,184193540	184186280,184186654,184186875,184187761,184187983,184188407,184188841,184188988,184189144,184189277,184189443,184189757,184189931,184191043,184191255,184192689,184192896,184193234,184193452,184194005	Gene ID= ENSG00000161204.11 TPM= 8.17 Transcript Type= NA
chr3	184230429	184242329	184230429	184242329	+	ENST00000426955.6@VWA5B2	ENST00000426955.6	protein_coding	184230429,184230747,184233178,184233576,184234266,184234631,184235153,184236152,184236343,184236638,184237226,184238303,184238563,184239394,184239689,184240791,184241024,184241187,184241490	184230667,184230917,184233397,184233733,184234397,184234755,184235308,184236262,184236551,184236749,184237411,184238474,184238873,184239583,184240036,184240928,184241107,184241404,184242329	Gene ID= ENSG00000145198.14 TPM= 1.17 Transcript Type= protein_coding
chr3	184242334	184248971	184242334	184248971	-	ENST00000397676.7@ALG3	ENST00000397676.7	protein_coding	184248745,184245713,184245468,184245198,184244601,184243791,184243554,184242813,184242334	184248971,184245812,184245615,184245358,184244721,184243996,184243630,184242957,184242676	Gene ID= ENSG00000214160.9 TPM= 11.68 Transcript Type= protein_coding
chr3	184242334	184248965	184242334	184248965	-	transcript7722.chr3.nic@ALG3	transcript7722.chr3.nic	protein_coding	184248782,184245713,184245468,184245198,184244601,184243791,184243554,184242813,184242334	184248965,184245812,184245615,184245358,184244721,184243996,184243630,184242957,184242676	Gene ID= ENSG00000214160.9 TPM= 4.67 Transcript Type= NA
chr3	184242425	184249548	184242425	184249548	-	ENST00000445626.6@ALG3	ENST00000445626.6	protein_coding	184249226,184245713,184245468,184245198,184244601,184243791,184243554,184242813,184242425	184249548,184245812,184245615,184245358,184244721,184243996,184243630,184242957,184242676	Gene ID= ENSG00000214160.9 TPM= 1.17 Transcript Type= protein_coding
chr3	184249650	184259585	184249650	184259585	+	ENST00000324557.8@ECE2	ENST00000324557.8	protein_coding	184249650,184257473,184258288	184249890,184257756,184259585	Gene ID= ENSG00000145194.17 TPM= 10.51 Transcript Type= protein_coding
chr3	184298709	184309054	184298709	184309054	+	ENST00000310118.8@PSMD2	ENST00000310118.8	protein_coding	184298709,184299851,184300280,184301537,184301847,184302370,184302679,184303002,184303320,184303643,184303947,184304304,184305768,184306054,184306350,184306751,184307357,184307614,184307890,184308449,184308708	184299401,184299907,184300444,184301658,184302071,184302528,184302823,184303062,184303466,184303749,184304074,184304391,184305930,184306155,184306495,184306834,184307525,184307708,184308016,184308567,184309054	Gene ID= ENSG00000175166.16 TPM= 491.16 Transcript Type= protein_coding
chr3	184299232	184309048	184299232	184309048	+	transcript7750.chr3.nic@PSMD2	transcript7750.chr3.nic	protein_coding	184299232,184299851,184300280,184301537,184301847,184302370,184302679,184303002,184303320,184303643,184303947,184304304,184305768,184306054,184306350,184306751,184307357,184307614,184307890,184308449,184308708	184299633,184299907,184300444,184301658,184302071,184302528,184302823,184303062,184303466,184303749,184304074,184304391,184305930,184306155,184306495,184306834,184307525,184307708,184308016,184308567,184309048	Gene ID= ENSG00000175166.16 TPM= 34.63 Transcript Type= NA
chr3	184314502	184335353	184314502	184335353	+	ENST00000414031.5@EIF4G1	ENST00000414031.5	protein_coding	184314502,184315489,184315763,184316072,184317321,184317717,184319689,184320630,184320927,184321282,184322362,184322544,184322821,184323083,184323408,184323780,184324201,184324878,184325269,184325480,184325851,184326527,184326881,184327216,184327586,184327830,184328631,184328909,184331266,184331472,184331728,184331946,184334727	184314674,184315545,184315856,184316218,184317497,184317816,184319801,184320722,184320993,184322103,184322450,184322730,184322954,184323241,184323593,184323977,184324347,184325114,184325373,184325639,184325951,184326629,184326983,184327448,184327704,184328002,184328756,184328990,184331364,184331606,184331809,184332086,184335353	Gene ID= ENSG00000114867.20 TPM= 31.09 Transcript Type= protein_coding
chr3	184314495	184335353	184314495	184335353	+	ENST00000346169.6@EIF4G1	ENST00000346169.6	protein_coding	184314495,184315489,184315763,184316132,184317321,184317717,184319689,184320630,184320927,184321282,184322362,184322544,184322821,184323083,184323408,184323780,184324201,184324878,184325269,184325480,184325851,184326527,184326881,184327216,184327586,184327830,184328631,184328909,184331266,184331472,184331728,184331946,184334727	184314674,184315545,184315856,184316218,184317497,184317816,184319801,184320722,184320993,184322103,184322450,184322730,184322954,184323241,184323593,184323977,184324347,184325114,184325373,184325639,184325951,184326629,184326983,184327448,184327704,184328002,184328756,184328990,184331364,184331606,184331809,184332086,184335353	Gene ID= ENSG00000114867.20 TPM= 92.58 Transcript Type= protein_coding
chr3	184314542	184335351	184314542	184335351	+	ENST00000392537.6@EIF4G1	ENST00000392537.6	protein_coding	184314542,184317321,184317717,184319689,184320630,184320927,184321282,184322362,184322544,184322821,184323083,184323408,184323780,184324201,184324878,184325269,184325480,184325851,184326527,184326881,184327216,184327586,184327830,184328631,184328909,184331266,184331472,184331728,184331946,184334727	184314674,184317497,184317816,184319801,184320722,184320993,184322103,184322450,184322730,184322954,184323241,184323593,184323977,184324347,184325114,184325373,184325639,184325951,184326629,184326983,184327448,184327704,184328002,184328756,184328990,184331364,184331606,184331809,184332086,184335351	Gene ID= ENSG00000114867.20 TPM= 48.68 Transcript Type= protein_coding
chr3	184314567	184335017	184314567	184335017	+	ENST00000382330.7@EIF4G1	ENST00000382330.7	protein_coding	184314567,184315489,184315763,184316132,184316713,184317321,184317717,184319689,184320630,184320927,184321282,184322362,184322544,184322821,184323083,184323408,184323780,184324201,184324878,184325269,184325480,184325851,184326527,184326881,184327216,184327586,184327830,184328631,184328909,184331266,184331472,184331728,184331946,184334727	184314674,184315545,184315856,184316218,184316733,184317497,184317816,184319801,184320722,184320993,184322103,184322450,184322730,184322954,184323241,184323593,184323977,184324347,184325114,184325373,184325639,184325951,184326629,184326983,184327448,184327704,184328002,184328756,184328990,184331364,184331606,184331809,184332086,184335017	Gene ID= ENSG00000114867.20 TPM= 25.55 Transcript Type= protein_coding
chr3	184315166	184335358	184315166	184335358	+	ENST00000342981.8@EIF4G1	ENST00000342981.8	protein_coding	184315166,184315763,184316132,184317321,184317717,184319689,184320630,184320927,184321282,184322362,184322544,184322821,184323083,184323405,184323780,184324201,184324878,184325269,184325480,184325851,184326527,184326881,184327216,184327586,184327830,184328631,184328909,184331266,184331472,184331728,184331946,184334727	184315545,184315856,184316218,184317497,184317816,184319801,184320722,184320993,184322103,184322450,184322730,184322954,184323241,184323593,184323977,184324347,184325114,184325373,184325639,184325951,184326629,184326983,184327448,184327704,184328002,184328756,184328990,184331364,184331606,184331809,184332086,184335358	Gene ID= ENSG00000114867.20 TPM= 45.63 Transcript Type= protein_coding
chr3	184335900	184346273	184335900	184346273	+	transcript7801.chr3.nic@FAM131A	transcript7801.chr3.nic	protein_coding	184335900,184337311,184338387,184341724,184342066,184342744,184344495	184336123,184337718,184338529,184341817,184342248,184342860,184346273	Gene ID= ENSG00000175182.14 TPM= 3.5 Transcript Type= NA
chr3	184335937	184346273	184335937	184346273	+	ENST00000340957.9@FAM131A	ENST00000340957.9	protein_coding	184335937,184337311,184341724,184342066,184342744,184344495	184336123,184337371,184341817,184342248,184342860,184346273	Gene ID= ENSG00000175182.14 TPM= 21.02 Transcript Type= protein_coding
chr3	184346188	184361659	184346188	184361659	-	transcript7795.chr3.nic@CLCN2	transcript7795.chr3.nic	protein_coding	184361417,184358975,184358682,184358182,184357962,184357779,184357620,184357362,184357182,184356993,184355694,184355374,184354904,184354548,184354101,184353662,184353250,184353033,184352737,184352443,184352293,184346935,184346188	184361659,184359131,184358813,184358310,184358095,184357856,184357698,184357487,184357266,184357094,184355778,184355529,184354973,184354658,184354314,184353795,184353422,184353147,184352810,184352496,184352331,184347021,184346800	Gene ID= ENSG00000114859.15 TPM= 2.34 Transcript Type= NA
chr3	184346185	184361651	184346185	184361651	-	ENST00000265593.8@CLCN2	ENST00000265593.8	protein_coding	184361417,184358975,184358682,184358182,184357962,184357779,184357620,184357362,184357182,184356993,184355694,184355374,184354904,184354548,184354101,184353662,184353250,184353033,184352737,184352443,184352293,184352013,184346935,184346185	184361651,184359131,184358813,184358310,184358095,184357856,184357698,184357487,184357266,184357094,184355778,184355529,184354973,184354658,184354314,184353795,184353422,184353147,184352810,184352496,184352331,184352117,184347021,184346800	Gene ID= ENSG00000114859.15 TPM= 2.34 Transcript Type= protein_coding
chr3	184361681	184368594	184361681	184368594	+	transcript7805.chr3.nnic@POLR2H	transcript7805.chr3.nnic	protein_coding	184361681,184363226,184364966,184365133,184366717,184368177	184362146,184363565,184365049,184365226,184366800,184368594	Gene ID= ENSG00000163882.9 TPM= 2.34 Transcript Type= NA
chr3	184361715	184368533	184361715	184368533	+	transcript7806.chr3.nic@POLR2H	transcript7806.chr3.nic	protein_coding	184361715,184363116,184364966,184365133,184366717,184368177	184362146,184363565,184365049,184365226,184366800,184368533	Gene ID= ENSG00000163882.9 TPM= 4.67 Transcript Type= NA
chr3	184361718	184368594	184361718	184368594	+	ENST00000456318.5@POLR2H	ENST00000456318.5	protein_coding	184361718,184362873,184364966,184365133,184366717,184368177	184362146,184363565,184365049,184365226,184366800,184368594	Gene ID= ENSG00000163882.9 TPM= 30.36 Transcript Type= protein_coding
chr3	184363403	184368533	184363403	184368533	+	ENST00000452961.5@POLR2H	ENST00000452961.5	protein_coding	184363403,184364966,184365133,184366717,184368177	184363574,184365049,184365226,184366800,184368533	Gene ID= ENSG00000163882.9 TPM= 4.67 Transcript Type= protein_coding
chr3	184561784	184582409	184561784	184582409	+	ENST00000330394.2@EPHB3	ENST00000330394.2	protein_coding	184561784,184571318,184572504,184575830,184576842,184577343,184577658,184577898,184578414,184579477,184579687,184580402,184580729,184580972,184581253,184581514	184562353,184571382,184573176,184575985,184577183,184577467,184577817,184578006,184578466,184579599,184579934,184580617,184580878,184581165,184581408,184582409	Gene ID= ENSG00000182580.2 TPM= 19.85 Transcript Type= protein_coding
chr3	184710367	184712002	184710367	184712002	-	ENST00000317897.4@MAGEF1	ENST00000317897.4	protein_coding	184710367	184712002	Gene ID= ENSG00000177383.4 TPM= 96.91 Transcript Type= protein_coding
chr3	184715561	184741224	184715561	184741224	+	transcript7828.chr3.nnic@AC107294.2	transcript7828.chr3.nnic	lincRNA	184715561,184737550,184738635	184716172,184737771,184741224	Gene ID= ENSG00000272970.1 TPM= 7.01 Transcript Type= NA
chr3	184812171	185052612	184812171	185052612	+	ENST00000436792.6@VPS8	ENST00000436792.6	protein_coding	184812171,184824545,184826163,184832689,184834649,184838714,184839698,184849071,184849936,184852500,184853857,184854114,184855711,184859985,184862897,184866876,184868024,184868946,184869482,184870716,184886110,184894703,184898565,184900921,184913519,184914981,184915355,184920127,184924862,184926594,184928451,184929580,184930470,184936246,184940197,184957374,184964468,184966671,184971649,184982566,184983012,184993983,184996332,184999696,185024336,185048479,185051876	184812225,184824785,184826231,184832819,184834742,184838746,184839752,184849195,184850022,184852567,184854010,184854173,184855818,184860065,184863067,184866950,184868059,184869036,184869528,184870805,184886156,184894925,184898654,184900972,184913561,184915053,184915474,184920198,184924981,184926650,184928533,184929664,184930568,184936335,184940243,184957521,184964557,184966713,184971752,184982647,184983094,184994063,184996501,184999861,185024389,185048559,185052612	Gene ID= ENSG00000156931.15 TPM= 30.36 Transcript Type= protein_coding
chr3	184812183	185052604	184812183	185052604	+	ENST00000446204.6@VPS8	ENST00000446204.6	protein_coding	184812183,184824545,184826163,184832689,184834649,184838714,184839698,184849071,184849936,184852500,184853857,184854114,184855711,184859985,184862897,184866876,184868024,184868946,184869482,184870716,184898565,184900921,184913519,184914981,184915355,184920127,184924862,184926594,184928451,184929580,184930470,184936246,184940197,184957374,184964468,184966671,184971649,184982566,184983012,184993983,184996332,184999696,185024336,185048479,185051876	184812225,184824785,184826231,184832819,184834742,184838746,184839752,184849195,184850022,184852567,184854010,184854173,184855818,184860065,184863067,184866950,184868059,184869036,184869528,184870805,184898654,184900972,184913561,184915053,184915474,184920198,184924981,184926650,184928533,184929664,184930568,184936335,184940243,184957521,184964557,184966713,184971752,184982647,184983094,184994063,184996501,184999861,185024389,185048559,185052604	Gene ID= ENSG00000156931.15 TPM= 4.67 Transcript Type= protein_coding
chr3	185190624	185254098	185190624	185254098	-	ENST00000231887.7@EHHADH	ENST00000231887.7	protein_coding	185253949,185248414,185235290,185229432,185218136,185204416,185190624	185254098,185248517,185235462,185229543,185218240,185204757,185193487	Gene ID= ENSG00000113790.10 TPM= 7.01 Transcript Type= protein_coding
chr3	185282941	185293079	185282941	185293079	+	ENST00000448876.5@MAP3K13	ENST00000448876.5	protein_coding	185282941,185285517,185291613	185283027,185285643,185293079	Gene ID= ENSG00000073803.13 TPM= 15.18 Transcript Type= protein_coding
chr3	185363120	185489097	185363120	185489097	+	ENST00000265026.7@MAP3K13	ENST00000265026.7	protein_coding	185363120,185428497,185437447,185443445,185447789,185449900,185451287,185463550,185465747,185466826,185472975,185477326,185480232,185482355	185363368,185429056,185437630,185443636,185447947,185450058,185451395,185463659,185465863,185466963,185473761,185477396,185480529,185489097	Gene ID= ENSG00000073803.13 TPM= 11.68 Transcript Type= protein_coding
chr3	185489601	185499057	185489601	185499057	-	ENST00000421852.5@TMEM41A	ENST00000421852.5	protein_coding	185498843,185496828,185495154,185494623,185489601	185499057,185496981,185495315,185494761,185491757	Gene ID= ENSG00000163900.10 TPM= 17.51 Transcript Type= protein_coding
chr3	185490996	185499059	185490996	185499059	-	transcript7867.chr3.nic@TMEM41A	transcript7867.chr3.nic	protein_coding	185498843,185494623,185490996	185499059,185496981,185491757	Gene ID= ENSG00000163900.10 TPM= 3.5 Transcript Type= NA
chr3	185506262	185552613	185506262	185552613	-	ENST00000296252.8@LIPH	ENST00000296252.8	protein_coding	185552423,185534765,185533571,185527484,185524071,185519142,185517067,185514410,185511524,185506262	185552613,185535132,185533679,185527585,185524160,185519309,185517162,185514521,185511697,185508877	Gene ID= ENSG00000163898.9 TPM= 6.42 Transcript Type= protein_coding
chr3	185507047	185552617	185507047	185552617	-	transcript7873.chr3.nnic@LIPH	transcript7873.chr3.nnic	protein_coding	185552423,185534765,185533571,185527484,185524071,185519142,185517067,185514410,185511578,185507047	185552617,185535132,185533679,185527585,185524160,185519309,185517162,185514521,185511697,185508877	Gene ID= ENSG00000163898.9 TPM= 4.09 Transcript Type= NA
chr3	185507779	185527957	185507779	185527957	-	transcript7878.chr3.nic@LIPH	transcript7878.chr3.nic	protein_coding	185527484,185524071,185519142,185517067,185514410,185511524,185507779	185527957,185524160,185519309,185517162,185514521,185511697,185508877	Gene ID= ENSG00000163898.9 TPM= 2.34 Transcript Type= NA
chr3	185586201	185631101	185586201	185631101	+	transcript7880.chr3.nnic@SENP2	transcript7880.chr3.nnic	protein_coding	185586201,185586396,185590114,185598412,185598958,185600765,185606330,185609247,185611651,185612607,185613345,185614564,185617480,185619299,185621826,185623998,185626298,185629782	185586319,185586514,185590169,185598545,185599024,185600855,185606498,185609350,185611745,185612658,185613408,185614740,185617611,185619502,185621905,185624082,185626393,185631101	Gene ID= ENSG00000163904.12 TPM= 4.67 Transcript Type= NA
chr3	185586174	185633551	185586174	185633551	+	ENST00000296257.9@SENP2	ENST00000296257.9	protein_coding	185586174,185590114,185598412,185598958,185600765,185606330,185609247,185611651,185612607,185613345,185614564,185617480,185619299,185621826,185623998,185626298,185629782	185586514,185590169,185598545,185599024,185600855,185606498,185609350,185611745,185612658,185613408,185614740,185617611,185619502,185621905,185624082,185626393,185633551	Gene ID= ENSG00000163904.12 TPM= 18.68 Transcript Type= protein_coding
chr3	185643739	185825056	185643739	185825056	-	ENST00000382199.6@IGF2BP2	ENST00000382199.6	protein_coding	185824783,185823153,185698299,185696612,185692699,185689355,185687057,185675791,185675296,185672541,185658341,185657286,185652094,185649403,185647025,185643739	185825056,185823213,185698347,185696663,185692762,185689627,185687191,185675913,185675431,185672669,185658409,185657402,185652168,185649534,185647138,185645623	Gene ID= ENSG00000073792.15 TPM= 4.67 Transcript Type= protein_coding
chr3	185675016	185825050	185675016	185825050	-	transcript7897.chr3.nic@IGF2BP2	transcript7897.chr3.nic	protein_coding	185824783,185823153,185698299,185696612,185692699,185689355,185687057,185675791,185675016	185825050,185823213,185698347,185696663,185692762,185689627,185687191,185675913,185675431	Gene ID= ENSG00000073792.15 TPM= 2.34 Transcript Type= NA
chr3	185917330	185938029	185917330	185938029	-	ENST00000456380.5@TRA2B	ENST00000456380.5	protein_coding	185937825,185931577,185926601,185925464,185923796,185922011,185921104,185919437,185918365,185917330	185938029,185931852,185926734,185925626,185923984,185922126,185921187,185919496,185918438,185917725	Gene ID= ENSG00000136527.17 TPM= 5.84 Transcript Type= nonsense_mediated_decay
chr3	185915906	185938136	185915906	185938136	-	ENST00000453386.6@TRA2B	ENST00000453386.6	protein_coding	185937825,185926601,185925464,185923796,185922011,185921104,185919437,185918365,185915906	185938136,185926734,185925626,185923984,185922126,185921187,185919496,185918438,185917725	Gene ID= ENSG00000136527.17 TPM= 9.34 Transcript Type= protein_coding
chr3	185916744	185929073	185916744	185929073	-	ENST00000492417.5@TRA2B	ENST00000492417.5	protein_coding	185926601,185925464,185923796,185922011,185921104,185919437,185918365,185916744	185929073,185925626,185923984,185922126,185921187,185919496,185918438,185917725	Gene ID= ENSG00000136527.17 TPM= 1.17 Transcript Type= retained_intron
chr3	185927683	185931969	185927683	185931969	+	transcript7907.chr3.nnic@NA	transcript7907.chr3.nnic	NA	185927683	185931969	Gene ID= novel_gene_chr3_7908 TPM= 5.84 Transcript Type= NA
chr3	185959943	185980872	185959943	185980872	+	ENST00000423298.5@NMRAL2P	ENST00000423298.5	transcribed_unprocessed_pseudogene	185959943,185971615,185975166,185979658	185960078,185971864,185975356,185980872	Gene ID= ENSG00000171658.8 TPM= 1.17 Transcript Type= processed_transcript
chr3	186046308	186109112	186046308	186109112	-	ENST00000306376.9@ETV5	ENST00000306376.9	protein_coding	186108940,186105824,186105625,186105449,186105305,186081046,186079817,186065813,186064417,186057423,186057075,186052030,186046308	186109112,186105942,186105712,186105496,186105355,186081175,186080104,186066072,186064476,186057491,186057244,186052131,186048860	Gene ID= ENSG00000244405.7 TPM= 16.35 Transcript Type= protein_coding
chr3	186095120	186109081	186095120	186109081	-	ENST00000476890.1@ETV5	ENST00000476890.1	protein_coding	186108940,186105824,186105625,186105449,186105305,186095120	186109081,186105942,186105712,186105496,186105355,186095313	Gene ID= ENSG00000244405.7 TPM= 1.17 Transcript Type= processed_transcript
chr3	186105982	186106224	186105982	186106224	+	transcript7915.chr3.nnic@NA	transcript7915.chr3.nnic	NA	186105982	186106224	Gene ID= novel_gene_chr3_7916 TPM= 3.5 Transcript Type= NA
chr3	186546339	186567352	186546339	186567352	-	ENST00000338733.9@TBCCD1	ENST00000338733.9	protein_coding	186567267,186563994,186558417,186556409,186554898,186554254,186551129,186546339	186567352,186564372,186558572,186556775,186555084,186554751,186551279,186546955	Gene ID= ENSG00000113838.12 TPM= 15.18 Transcript Type= protein_coding
chr3	186567403	186585800	186567403	186585800	+	ENST00000439351.5@DNAJB11	ENST00000439351.5	protein_coding	186567403,186570163,186572095,186575840,186577668,186581371,186581995,186582716,186583865,186584430,186585344	186567596,186570965,186572251,186575937,186577800,186581513,186582077,186582773,186583976,186584589,186585800	Gene ID= ENSG00000090520.11 TPM= 55.46 Transcript Type= protein_coding
chr3	186570678	186585799	186570678	186585799	+	ENST00000265028.7@DNAJB11	ENST00000265028.7	protein_coding	186570678,186572095,186575840,186577668,186581371,186581995,186582716,186583865,186584430,186585344	186570965,186572251,186575937,186577800,186581513,186582077,186582773,186583976,186584589,186585799	Gene ID= ENSG00000090520.11 TPM= 60.13 Transcript Type= protein_coding
chr3	186717331	186743619	186717331	186743619	+	ENST00000265023.8@KNG1	ENST00000265023.8	protein_coding	186717331,186720105,186722437,186725088,186727237,186731545,186732502,186739099,186739328,186741522	186717737,186720215,186722521,186725260,186727344,186731629,186732674,186739206,186739414,186743619	Gene ID= ENSG00000113889.11 TPM= 1.17 Transcript Type= protein_coding
chr3	186783576	186789897	186783576	186789897	+	transcript7948.chr3.nic@EIF4A2	transcript7948.chr3.nic	protein_coding	186783576,186784432,186784564,186784962,186785883,186786164,186786502,186787127,186787495,186787803	186783639,186784477,186784696,186785101,186786051,186786273,186786645,186787264,186787584,186789897	Gene ID= ENSG00000156976.16 TPM= 18.1 Transcript Type= NA
chr3	186783537	186789897	186783537	186789897	+	transcript7962.chr3.nic@EIF4A2	transcript7962.chr3.nic	protein_coding	186783537,186784432,186784564,186785883,186786164,186786502,186787127,186787495,186787803	186783639,186784477,186784696,186786051,186786273,186786645,186787264,186787584,186789897	Gene ID= ENSG00000156976.16 TPM= 21.6 Transcript Type= NA
chr3	186783577	186789897	186783577	186789897	+	ENST00000440191.6@EIF4A2	ENST00000440191.6	protein_coding	186783577,186784429,186784564,186784962,186785883,186786164,186786502,186787127,186787495,186787803,186789125	186783639,186784477,186784696,186785101,186786051,186786273,186786645,186787264,186787584,186787882,186789897	Gene ID= ENSG00000156976.16 TPM= 104.79 Transcript Type= protein_coding
chr3	186783577	186789881	186783577	186789881	+	ENST00000425053.5@EIF4A2	ENST00000425053.5	protein_coding	186783577,186784432,186784564,186784962,186785883,186786164,186786502,186787127,186787495,186787803,186788310,186789125	186783639,186784477,186784696,186785101,186786051,186786273,186786645,186787264,186787584,186787882,186788416,186789881	Gene ID= ENSG00000156976.16 TPM= 17.81 Transcript Type= nonsense_mediated_decay
chr3	186783578	186789894	186783578	186789894	+	ENST00000485101.5@EIF4A2	ENST00000485101.5	protein_coding	186783578,186784432,186784564,186786164	186783639,186784477,186786051,186789894	Gene ID= ENSG00000156976.16 TPM= 1.17 Transcript Type= retained_intron
chr3	186789895	186806695	186789895	186806695	-	ENST00000392481.6@RFC4	ENST00000392481.6	protein_coding	186806425,186804583,186801117,186797535,186794658,186792804,186792490,186791725,186790326,186790142,186789895	186806695,186804724,186801195,186797614,186794777,186792947,186792610,186791850,186790406,186790255,186790064	Gene ID= ENSG00000163918.10 TPM= 1.17 Transcript Type= protein_coding
chr3	186789895	186806482	186789895	186806482	-	transcript7959.chr3.nic@RFC4	transcript7959.chr3.nic	protein_coding	186806290,186804583,186801117,186797535,186794658,186792804,186792490,186791725,186790142,186789895	186806482,186804724,186801195,186797614,186794777,186792947,186792610,186791850,186790406,186790064	Gene ID= ENSG00000163918.10 TPM= 2.34 Transcript Type= NA
chr3	186789900	186806501	186789900	186806501	-	ENST00000296273.6@RFC4	ENST00000296273.6	protein_coding	186806290,186804583,186801117,186797535,186794658,186792804,186792490,186791725,186790326,186790142,186789900	186806501,186804724,186801195,186797614,186794777,186792947,186792610,186791850,186790406,186790255,186790064	Gene ID= ENSG00000163918.10 TPM= 2.34 Transcript Type= protein_coding
chr3	186826641	186827550	186826641	186827550	-	transcript7976.chr3.nnic@NA	transcript7976.chr3.nnic	NA	186826641	186827550	Gene ID= novel_gene_chr3_7977 TPM= 2.34 Transcript Type= NA
chr3	186930526	187078553	186930526	187078553	+	transcript7984.chr3.nnic@ST6GAL1	transcript7984.chr3.nnic	protein_coding	186930526,186948855,186963785,187038742,187042654,187051249,187072849,187074159,187075562	186930834,186948938,186963926,187038873,187043310,187051346,187072947,187074333,187078553	Gene ID= ENSG00000073849.14 TPM= 19.85 Transcript Type= NA
chr3	186931345	187078553	186931345	187078553	+	transcript7986.chr3.nic@ST6GAL1	transcript7986.chr3.nic	protein_coding	186931345,186963785,187038742,187042654,187051249,187072849,187074159,187075562	186931394,186963926,187038873,187043310,187051346,187072947,187074333,187078553	Gene ID= ENSG00000073849.14 TPM= 18.68 Transcript Type= NA
chr3	186930485	187078553	186930485	187078553	+	ENST00000169298.7@ST6GAL1	ENST00000169298.7	protein_coding	186930485,186963785,187038742,187042654,187051249,187072849,187074159,187075562	186930834,186963926,187038873,187043310,187051346,187072947,187074333,187078553	Gene ID= ENSG00000073849.14 TPM= 96.91 Transcript Type= protein_coding
chr3	186939070	186940197	186939070	186940197	-	transcript7990.chr3.nnic@NA	transcript7990.chr3.nnic	NA	186939070	186940197	Gene ID= novel_gene_chr3_7991 TPM= 2.34 Transcript Type= NA
chr3	187120948	187139523	187120948	187139523	-	ENST00000296277.8@RPL39L	ENST00000296277.8	protein_coding	187139213,187127999,187120948	187139523,187128062,187121328	Gene ID= ENSG00000163923.9 TPM= 4.67 Transcript Type= protein_coding
chr3	187234084	187291977	187234084	187291977	-	ENST00000392472.6@MASP1	ENST00000392472.6	protein_coding	187291628,187262543,187260741,187256664,187253168,187251634,187250251,187243484,187241481,187234084	187291977,187262720,187260872,187256860,187253315,187251752,187250329,187243621,187241555,187236567	Gene ID= ENSG00000127241.16 TPM= 3.5 Transcript Type= protein_coding
chr3	187368332	187372076	187368332	187372076	+	ENST00000259030.2@RTP4	ENST00000259030.2	protein_coding	187368332,187370788	187368596,187372076	Gene ID= ENSG00000136514.2 TPM= 8.17 Transcript Type= protein_coding
chr3	187721377	187745727	187721377	187745727	-	ENST00000406870.6@BCL6	ENST00000406870.6	protein_coding	187745410,187734869,187733533,187731709,187729050,187728360,187726731,187725499,187724941,187721377	187745727,187734907,187733703,187731930,187730021,187728544,187726898,187725629,187725078,187722601	Gene ID= ENSG00000113916.17 TPM= 40.87 Transcript Type= protein_coding
chr3	187721377	187745725	187721377	187745725	-	ENST00000621333.4@BCL6	ENST00000621333.4	protein_coding	187745410,187734869,187733533,187731709,187729050,187728360,187725499,187724941,187721377	187745725,187734907,187733703,187731930,187730021,187728544,187725629,187725078,187722601	Gene ID= ENSG00000113916.17 TPM= 9.34 Transcript Type= protein_coding
chr3	188152885	188154230	188152885	188154230	-	transcript8014.chr3.nnic@NA	transcript8014.chr3.nnic	NA	188152885	188154230	Gene ID= novel_gene_chr3_8015 TPM= 3.5 Transcript Type= NA
chr3	188153876	188878775	188153876	188878775	+	transcript8010.chr3.nic@LPP	transcript8010.chr3.nic	protein_coding	188153876,188225405,188406112,188484592,188524665,188609161,188708267,188760113,188866200,188872643,188874351	188154021,188225527,188406313,188484704,188524787,188609844,188708393,188760282,188866378,188872763,188878775	Gene ID= ENSG00000145012.13 TPM= 17.51 Transcript Type= NA
chr3	188154144	188878775	188154144	188878775	+	transcript8011.chr3.nnic@LPP	transcript8011.chr3.nnic	protein_coding	188154144,188225405,188406112,188484592,188524665,188609161,188708267,188760113,188866200,188872643,188874351	188154252,188225527,188406313,188484704,188524787,188609844,188708393,188760282,188866378,188872763,188878775	Gene ID= ENSG00000145012.13 TPM= 18.68 Transcript Type= NA
chr3	188212684	188878775	188212684	188878775	+	transcript8012.chr3.nic@LPP	transcript8012.chr3.nic	protein_coding	188212684,188225405,188406112,188484592,188524665,188609161,188708267,188760113,188866200,188872643,188874351	188212831,188225527,188406313,188484704,188524787,188609844,188708393,188760282,188866378,188872763,188878775	Gene ID= ENSG00000145012.13 TPM= 18.68 Transcript Type= NA
chr3	188883682	188886304	188883682	188886304	+	transcript8016.chr3.nnic@NA	transcript8016.chr3.nnic	NA	188883682	188886304	Gene ID= novel_gene_chr3_8017 TPM= 3.5 Transcript Type= NA
chr3	189956728	190120929	189956728	190120929	-	ENST00000319332.9@P3H2	ENST00000319332.9	protein_coding	190120252,189995290,189994094,189988907,189987527,189986788,189984550,189983046,189974558,189973909,189972874,189971890,189970816,189963958,189956728	190120929,189995442,189994283,189989038,189987669,189986877,189984590,189983140,189974685,189974004,189973024,189972007,189970891,189964098,189958004	Gene ID= ENSG00000090530.9 TPM= 73.56 Transcript Type= protein_coding
chr3	190305701	190322475	190305701	190322475	-	ENST00000295522.3@CLDN1	ENST00000295522.3	protein_coding	190321984,190312872,190310169,190305701	190322475,190313036,190310253,190308439	Gene ID= ENSG00000163347.5 TPM= 28.02 Transcript Type= protein_coding
chr3	190514059	190651512	190514059	190651512	+	ENST00000447382.5@IL1RAP	ENST00000447382.5	protein_coding	190514059,190556130,190564289,190604128,190608995,190620275,190623344,190627323,190629350,190644248,190645699,190648338	190514219,190556216,190564353,190604413,190609181,190620440,190623415,190627449,190629498,190644397,190645842,190651512	Gene ID= ENSG00000196083.9 TPM= 10.51 Transcript Type= protein_coding
chr3	190514051	190651519	190514051	190651519	+	ENST00000072516.7@IL1RAP	ENST00000072516.7	protein_coding	190514051,190564289,190604128,190608995,190620275,190623344,190627323,190629350,190644248,190645699,190648338	190514219,190564353,190604413,190609181,190620440,190623415,190627449,190629498,190644397,190645842,190651519	Gene ID= ENSG00000196083.9 TPM= 8.17 Transcript Type= protein_coding
chr3	190514072	190517975	190514072	190517975	+	transcript8050.chr3.nnic@NA	transcript8050.chr3.nnic	NA	190514072	190517975	Gene ID= novel_gene_chr3_8051 TPM= 2.34 Transcript Type= NA
chr3	191329085	191392175	191329085	191392175	+	ENST00000392456.3@CCDC50	ENST00000392456.3	protein_coding	191329085,191357088,191357998,191361069,191369919,191375062,191380159,191380687,191380828,191382746,191389496,191391741	191329723,191357150,191358124,191361159,191370036,191375589,191380274,191380731,191380932,191382825,191389602,191392175	Gene ID= ENSG00000152492.13 TPM= 5.25 Transcript Type= protein_coding
chr3	191329077	191398670	191329077	191398670	+	ENST00000392455.7@CCDC50	ENST00000392455.7	protein_coding	191329077,191357088,191357998,191361069,191369919,191380159,191380687,191380828,191382746,191389496,191391741	191329723,191357150,191358124,191361159,191370036,191380274,191380731,191380932,191382825,191389602,191398670	Gene ID= ENSG00000152492.13 TPM= 62.47 Transcript Type= protein_coding
chr3	192796815	192918161	192796815	192918161	-	ENST00000392452.2@MB21D2	ENST00000392452.2	protein_coding	192917630,192796815	192918161,192799650	Gene ID= ENSG00000180611.6 TPM= 28.02 Transcript Type= protein_coding
chr3	193398970	193554910	193398970	193554910	-	transcript8088.chr3.nic@ATP13A4	transcript8088.chr3.nic	protein_coding	193554740,193514698,193502493,193493090,193492917,193491329,193489730,193483936,193470859,193467316,193466025,193464940,193462762,193459081,193457379,193457000,193454101,193448206,193442393,193441466,193440558,193439023,193435648,193433845,193414579,193412178,193410982,193407313,193398970	193554910,193514871,193502639,193493160,193492997,193491398,193489864,193484005,193470993,193467486,193466182,193465128,193462823,193459231,193457465,193457153,193454212,193448330,193442556,193441588,193440637,193439065,193435744,193433917,193414750,193412371,193411070,193407393,193402864	Gene ID= ENSG00000127249.14 TPM= 73.17 Transcript Type= NA
chr3	193402077	193554910	193402077	193554910	-	transcript8090.chr3.nnic@ATP13A4	transcript8090.chr3.nnic	protein_coding	193554740,193514698,193502493,193493090,193491329,193489730,193483936,193470859,193467316,193466025,193464940,193462762,193459081,193457379,193457000,193454101,193448206,193442393,193441466,193440558,193439023,193438475,193435648,193433845,193414579,193412178,193410982,193407313,193402077	193554910,193514871,193502639,193493160,193491398,193489864,193484005,193470993,193467486,193466182,193465128,193462823,193459231,193457465,193457153,193454212,193448330,193442556,193441588,193440637,193439065,193438584,193435744,193433917,193414750,193412371,193411070,193407393,193402864	Gene ID= ENSG00000127249.14 TPM= 8.76 Transcript Type= NA
chr3	193402077	193484117	193402077	193484117	-	transcript8098.chr3.nic@ATP13A4	transcript8098.chr3.nic	protein_coding	193483936,193470859,193467316,193466025,193464940,193462762,193459081,193457379,193457000,193454101,193448206,193442393,193441466,193440558,193439023,193438475,193435648,193433845,193414579,193412178,193410982,193407313,193402077	193484117,193470993,193467486,193466182,193465128,193462823,193459231,193457465,193457153,193454212,193448330,193442556,193441588,193440637,193439065,193438584,193435744,193433917,193414750,193412371,193411070,193407393,193402864	Gene ID= ENSG00000127249.14 TPM= 6.42 Transcript Type= NA
chr3	193440115	193554907	193440115	193554907	-	ENST00000490925.5@ATP13A4	ENST00000490925.5	protein_coding	193554740,193514698,193502493,193493090,193492917,193491329,193489730,193483936,193470859,193467316,193466025,193464940,193462762,193459081,193457379,193457000,193454101,193448206,193442393,193441466,193440115	193554907,193514871,193502639,193493160,193492997,193491398,193489864,193484005,193470993,193467486,193466182,193465128,193462823,193459231,193457465,193457153,193454212,193448330,193442556,193441588,193440637	Gene ID= ENSG00000127249.14 TPM= 13.63 Transcript Type= retained_intron
chr3	193437826	193554910	193437826	193554910	-	transcript8105.chr3.nnic@ATP13A4	transcript8105.chr3.nnic	protein_coding	193554740,193514698,193502493,193493090,193492917,193491329,193489730,193483936,193470859,193467316,193466025,193462762,193459081,193457379,193457000,193454101,193448206,193442393,193441466,193437826	193554910,193514871,193502639,193493160,193492997,193491398,193489864,193484005,193470993,193467486,193466182,193462823,193459231,193457465,193457153,193454212,193448330,193442556,193441588,193440637	Gene ID= ENSG00000127249.14 TPM= 4.29 Transcript Type= NA
chr3	193434049	193436519	193434049	193436519	+	transcript8124.chr3.nnic@NA	transcript8124.chr3.nnic	NA	193434049	193436519	Gene ID= novel_gene_chr3_8125 TPM= 4.67 Transcript Type= NA
chr3	193506711	193555586	193506711	193555586	+	transcript8114.chr3.nnic@ATP13A4-AS1	transcript8114.chr3.nnic	antisense_RNA	193506711,193540010,193554770	193506842,193540090,193555586	Gene ID= ENSG00000225473.1 TPM= 12.84 Transcript Type= NA
chr3	193506780	193555586	193506780	193555586	+	transcript8116.chr3.nnic@ATP13A4-AS1	transcript8116.chr3.nnic	antisense_RNA	193506780,193540010,193554770	193506878,193540090,193555586	Gene ID= ENSG00000225473.1 TPM= 4.67 Transcript Type= NA
chr3	193517499	193519564	193517499	193519564	-	transcript8126.chr3.nnic@NA	transcript8126.chr3.nnic	NA	193517499	193519564	Gene ID= novel_gene_chr3_8127 TPM= 3.5 Transcript Type= NA
chr3	193593144	193697810	193593144	193697810	+	ENST00000361510.6@OPA1	ENST00000361510.6	protein_coding	193593144,193614723,193615674,193617178,193617784,193618869,193626092,193631612,193635418,193637195,193637952,193642765,193642975,193643373,193643528,193643975,193645553,193645728,193647065,193648070,193648795,193654862,193657080,193658887,193659482,193662822,193664880,193666296,193667170,193692063,193694606	193593409,193615041,193615770,193617285,193617837,193618936,193626202,193631665,193635522,193637281,193638065,193642845,193643049,193643444,193643627,193644105,193645625,193645800,193647180,193648134,193648871,193655027,193657232,193658995,193659561,193662962,193664996,193666389,193667280,193692132,193697810	Gene ID= ENSG00000198836.8 TPM= 1.4 Transcript Type= protein_coding
chr3	193593144	193697810	193593144	193697810	+	ENST00000361828.6@OPA1	ENST00000361828.6	protein_coding	193593144,193614723,193615674,193617178,193617784,193618869,193631612,193635418,193637195,193637952,193642765,193642975,193643373,193643528,193643975,193645553,193645728,193647065,193648070,193648795,193654862,193657080,193658887,193659482,193662822,193664880,193666296,193667170,193692063,193694606	193593409,193615041,193615770,193617285,193617837,193618936,193631665,193635522,193637281,193638065,193642845,193643049,193643444,193643627,193644105,193645625,193645800,193647180,193648134,193648871,193655027,193657232,193658995,193659561,193662962,193664996,193666389,193667280,193692132,193697810	Gene ID= ENSG00000198836.8 TPM= 1.4 Transcript Type= protein_coding
chr3	193593144	193697811	193593144	193697811	+	ENST00000361908.7@OPA1	ENST00000361908.7	protein_coding	193593144,193614723,193615674,193617178,193618869,193626092,193631612,193635418,193637195,193637952,193642765,193642975,193643373,193643528,193643975,193645553,193645728,193647065,193648070,193648795,193654862,193657080,193658887,193659482,193662822,193664880,193666296,193667170,193692063,193694606	193593409,193615041,193615770,193617285,193618936,193626202,193631665,193635522,193637281,193638065,193642845,193643049,193643444,193643627,193644105,193645625,193645800,193647180,193648134,193648871,193655027,193657232,193658995,193659561,193662962,193664996,193666389,193667280,193692132,193697811	Gene ID= ENSG00000198836.8 TPM= 4.9 Transcript Type= protein_coding
chr3	193593144	193697823	193593144	193697823	+	ENST00000392438.7@OPA1	ENST00000392438.7	protein_coding	193593144,193614723,193615674,193617178,193618869,193631612,193635418,193637195,193637952,193642765,193642975,193643373,193643528,193643975,193645553,193645728,193647065,193648070,193648795,193654862,193657080,193658887,193659482,193662822,193664880,193666296,193667170,193692063,193694606	193593409,193615041,193615770,193617285,193618936,193631665,193635522,193637281,193638065,193642845,193643049,193643444,193643627,193644105,193645625,193645800,193647180,193648134,193648871,193655027,193657232,193658995,193659561,193662962,193664996,193666389,193667280,193692132,193697823	Gene ID= ENSG00000198836.8 TPM= 6.07 Transcript Type= protein_coding
chr3	193593144	193697810	193593144	193697810	+	ENST00000361150.6@OPA1	ENST00000361150.6	protein_coding	193593144,193614723,193615674,193618869,193626092,193631612,193635418,193637195,193637952,193642765,193642975,193643373,193643528,193643975,193645553,193645728,193647065,193648070,193648795,193654862,193657080,193658887,193659482,193662822,193664880,193666296,193667170,193692063,193694606	193593409,193615041,193615770,193618936,193626202,193631665,193635522,193637281,193638065,193642845,193643049,193643444,193643627,193644105,193645625,193645800,193647180,193648134,193648871,193655027,193657232,193658995,193659561,193662962,193664996,193666389,193667280,193692132,193697810	Gene ID= ENSG00000198836.8 TPM= 1.4 Transcript Type= protein_coding
chr3	194136145	194138732	194136145	194138732	+	ENST00000232424.3@HES1	ENST00000232424.3	protein_coding	194136145,194136617,194136961,194137683	194136488,194136712,194137048,194138732	Gene ID= ENSG00000114315.3 TPM= 37.36 Transcript Type= protein_coding
chr3	194203016	194250153	194203016	194250153	-	ENST00000415869.5@LINC02036	ENST00000415869.5	lincRNA	194250056,194204819,194203016	194250153,194204966,194203679	Gene ID= ENSG00000225742.5 TPM= 1.17 Transcript Type= lincRNA
chr3	194402677	194487057	194402677	194487057	-	transcript8165.chr3.nic@ATP13A3	transcript8165.chr3.nic	protein_coding	194486566,194485794,194462140,194460658,194459789,194459471,194457094,194455893,194454258,194453706,194450145,194448457,194447852,194446927,194444725,194441311,194438856,194437556,194437311,194437095,194433772,194431717,194431104,194430943,194430273,194430072,194429678,194428845,194427075,194425342,194419879,194413759,194412199,194402677	194487057,194485835,194462236,194460831,194459971,194459541,194457174,194455962,194454392,194453778,194450276,194448636,194448009,194447115,194444786,194441461,194438972,194437573,194437464,194437215,194433896,194431892,194431226,194431022,194430315,194430181,194429774,194428917,194427252,194425529,194419967,194413839,194412288,194406116	Gene ID= ENSG00000133657.14 TPM= 19.85 Transcript Type= NA
chr3	194451961	194453301	194451961	194453301	+	transcript8176.chr3.nnic@NA	transcript8176.chr3.nnic	NA	194451961	194453301	Gene ID= novel_gene_chr3_8177 TPM= 16.35 Transcript Type= NA
chr3	194583991	194584994	194583991	194584994	+	transcript8217.chr3.nnic@NA	transcript8217.chr3.nnic	NA	194583991	194584994	Gene ID= novel_gene_chr3_8218 TPM= 2.34 Transcript Type= NA
chr3	194584011	194590260	194584011	194590260	+	ENST00000453671.5@TMEM44-AS1	ENST00000453671.5	antisense_RNA	194584011,194589021,194589474,194589855	194584448,194589142,194589626,194590260	Gene ID= ENSG00000231770.5 TPM= 1.17 Transcript Type= antisense_RNA
chr3	194587681	194633385	194587681	194633385	-	transcript8193.chr3.nnic@TMEM44	transcript8193.chr3.nnic	protein_coding	194633079,194628383,194625897,194623529,194623224,194617099,194615569,194610916,194604261,194587681	194633385,194628509,194625990,194623695,194623310,194617269,194615697,194611077,194604445,194588639	Gene ID= ENSG00000145014.17 TPM= 2.34 Transcript Type= NA
chr3	194587681	194633672	194587681	194633672	-	transcript8197.chr3.nic@TMEM44	transcript8197.chr3.nic	protein_coding	194633563,194628383,194625897,194623529,194623224,194617099,194615569,194610916,194604287,194587681	194633672,194628509,194625990,194623695,194623310,194617269,194615697,194611020,194604445,194588639	Gene ID= ENSG00000145014.17 TPM= 2.34 Transcript Type= NA
chr3	194622548	194633570	194622548	194633570	-	transcript8210.chr3.nic@TMEM44	transcript8210.chr3.nic	protein_coding	194633079,194628383,194625897,194623529,194622548	194633570,194628509,194625990,194623695,194623310	Gene ID= ENSG00000145014.17 TPM= 4.67 Transcript Type= NA
chr3	194587673	194633421	194587673	194633421	-	ENST00000392432.6@TMEM44	ENST00000392432.6	protein_coding	194633079,194628383,194625897,194623529,194623224,194617636,194617099,194615569,194610916,194604287,194587673	194633421,194628509,194625990,194623695,194623310,194617776,194617269,194615697,194611020,194604445,194588639	Gene ID= ENSG00000145014.17 TPM= 1.17 Transcript Type= protein_coding
chr3	194632923	194645401	194632923	194645401	+	ENST00000447139.1@AC046143.1	ENST00000447139.1	antisense_RNA	194632923,194644675	194633167,194645401	Gene ID= ENSG00000229334.1 TPM= 2.34 Transcript Type= antisense_RNA
chr3	194640788	194672477	194640788	194672477	-	ENST00000265245.9@LSG1	ENST00000265245.9	protein_coding	194672064,194670009,194666452,194666203,194665557,194660073,194658957,194652729,194651115,194650881,194648681,194646164,194644573,194640788	194672477,194670135,194666572,194666289,194665643,194660133,194659133,194653142,194651216,194651024,194648804,194646243,194644746,194642247	Gene ID= ENSG00000041802.10 TPM= 59.55 Transcript Type= protein_coding
chr3	194654817	194657196	194654817	194657196	+	transcript8215.chr3.nnic@NA	transcript8215.chr3.nnic	NA	194654817	194657196	Gene ID= novel_gene_chr3_8216 TPM= 2.34 Transcript Type= NA
chr3	194686544	194689037	194686544	194689037	+	ENST00000329759.5@FAM43A	ENST00000329759.5	protein_coding	194686544	194689037	Gene ID= ENSG00000185112.5 TPM= 8.17 Transcript Type= protein_coding
chr3	195068279	195271167	195068279	195271167	-	ENST00000310380.10@XXYLT1	ENST00000310380.10	protein_coding	195270555,195226709,195156449,195068279	195271167,195226856,195156581,195070111	Gene ID= ENSG00000173950.15 TPM= 11.68 Transcript Type= protein_coding
chr3	195325415	195443091	195325415	195443091	-	transcript8244.chr3.nic@ACAP2	transcript8244.chr3.nic	protein_coding	195442795,195392090,195381903,195381009,195345259,195342471,195336932,195333028,195325415	195443091,195392147,195382022,195381062,195345317,195342654,195336976,195333123,195326959	Gene ID= ENSG00000114331.13 TPM= 4.67 Transcript Type= NA
chr3	195377139	195443025	195377139	195443025	-	transcript8247.chr3.nic@ACAP2	transcript8247.chr3.nic	protein_coding	195442795,195392090,195381903,195377139	195443025,195392147,195382022,195381062	Gene ID= ENSG00000114331.13 TPM= 4.67 Transcript Type= NA
chr3	195274736	195443078	195274736	195443078	-	ENST00000326793.10@ACAP2	ENST00000326793.10	protein_coding	195442795,195392090,195381903,195381009,195345259,195342471,195336932,195333028,195326885,195320701,195308786,195307223,195306511,195301966,195301575,195297190,195295708,195294719,195292265,195291706,195289121,195285796,195274736	195443078,195392147,195382022,195381062,195345317,195342654,195336976,195333123,195326959,195320813,195308837,195307323,195306616,195302174,195301644,195297281,195295892,195294811,195292452,195291815,195289231,195285857,195279428	Gene ID= ENSG00000114331.13 TPM= 12.84 Transcript Type= protein_coding
chr3	195514425	195543386	195514425	195543386	-	ENST00000618156.4@PPP1R2	ENST00000618156.4	protein_coding	195542904,195529794,195524819,195523692,195519018,195514425	195543386,195529901,195524896,195523786,195519185,195516942	Gene ID= ENSG00000184203.7 TPM= 105.08 Transcript Type= protein_coding
chr3	195528717	195543386	195528717	195543386	-	ENST00000462906.1@PPP1R2	ENST00000462906.1	protein_coding	195542904,195528717	195543386,195529901	Gene ID= ENSG00000184203.7 TPM= 5.84 Transcript Type= retained_intron
chr3	195568702	195584205	195568702	195584205	-	ENST00000343267.7@APOD	ENST00000343267.7	protein_coding	195583878,195579339,195573850,195571277,195568702	195584205,195579495,195573971,195571365,195569135	Gene ID= ENSG00000189058.8 TPM= 57.21 Transcript Type= protein_coding
chr3	195658041	195688862	195658041	195688862	+	transcript8273.chr3.nic@LINC00969	transcript8273.chr3.nic	lincRNA	195658041,195661756,195662571,195663624,195664086,195666066,195668519,195671132,195672484,195673818,195677727,195681190,195681536,195683752,195688533	195658165,195661841,195662733,195663767,195664250,195666214,195668641,195671300,195672679,195673987,195677848,195681301,195681666,195683865,195688862	Gene ID= ENSG00000242086.8 TPM= 4.09 Transcript Type= NA
chr3	195658065	195688862	195658065	195688862	+	ENST00000429897.5@LINC00969	ENST00000429897.5	lincRNA	195658065,195661756,195662571,195664086,195666066,195668519,195671132,195672484,195673818,195677727,195681190,195681536,195683752,195688533	195658165,195661841,195662733,195664250,195666214,195668641,195671300,195672679,195673987,195677848,195681301,195681666,195683865,195688862	Gene ID= ENSG00000242086.8 TPM= 4.09 Transcript Type= lincRNA
chr3	195686271	195690047	195686271	195690047	-	transcript8317.chr3.nnic@NA	transcript8317.chr3.nnic	NA	195687461,195686271	195690047,195686807	Gene ID= novel_gene_chr3_8318 TPM= 2.34 Transcript Type= NA
chr3	195686271	195692834	195686271	195692834	-	transcript8311.chr3.nnic@NA	transcript8311.chr3.nnic	NA	195687582,195687461,195686271	195692834,195687553,195686807	Gene ID= novel_gene_chr3_8312 TPM= 8.17 Transcript Type= NA
chr3	195695794	195697421	195695794	195697421	-	transcript8325.chr3.nnic@NA	transcript8325.chr3.nnic	NA	195695794	195697421	Gene ID= novel_gene_chr3_8326 TPM= 2.34 Transcript Type= NA
chr3	195697198	195698986	195697198	195698986	-	transcript8321.chr3.nnic@NA	transcript8321.chr3.nnic	NA	195697198	195698986	Gene ID= novel_gene_chr3_8322 TPM= 5.84 Transcript Type= NA
chr3	195712524	195714111	195712524	195714111	-	transcript8305.chr3.nnic@NA	transcript8305.chr3.nnic	NA	195713407,195713034,195712879,195712524	195714111,195713350,195712971,195712851	Gene ID= novel_gene_chr3_8306 TPM= 2.34 Transcript Type= NA
chr3	195712525	195714433	195712525	195714433	-	transcript8323.chr3.nnic@NA	transcript8323.chr3.nnic	NA	195712525	195714433	Gene ID= novel_gene_chr3_8324 TPM= 4.67 Transcript Type= NA
chr3	195720943	195733506	195720943	195733506	+	transcript8290.chr3.nnic@MUC20	transcript8290.chr3.nnic	protein_coding	195720943,195724680,195725583,195729648,195733150	195721083,195725126,195726572,195729739,195733506	Gene ID= ENSG00000176945.16 TPM= 14.01 Transcript Type= NA
chr3	195746765	195752559	195746765	195752559	-	transcript8328.chr3.nnic@MUC4	transcript8328.chr3.nnic	protein_coding	195752500,195751207,195750889,195748902,195746765	195752559,195751271,195751112,195749064,195747380	Gene ID= ENSG00000145113.21 TPM= 8.17 Transcript Type= NA
chr3	195863365	195869690	195863365	195869690	-	ENST00000420716.2@TNK2	ENST00000420716.2	protein_coding	195867361,195867169,195866889,195863365	195869690,195867264,195867016,195864187	Gene ID= ENSG00000061938.17 TPM= 15.18 Transcript Type= retained_intron
chr3	195875713	195877243	195875713	195877243	+	transcript8333.chr3.nnic@NA	transcript8333.chr3.nnic	NA	195875713	195877243	Gene ID= novel_gene_chr3_8334 TPM= 2.34 Transcript Type= NA
chr3	195908076	195911257	195908076	195911257	+	ENST00000458180.1@TNK2-AS1	ENST00000458180.1	antisense_RNA	195908076,195909865	195908778,195911257	Gene ID= ENSG00000224614.1 TPM= 1.17 Transcript Type= antisense_RNA
chr3	195959282	195990315	195959282	195990315	-	transcript8341.chr3.nic@SDHAP1	transcript8341.chr3.nic	transcribed_unprocessed_pseudogene	195990190,195986519,195985627,195984594,195984112,195982162,195979744,195977083,195975705,195974397,195971323,195967879,195967514,195965429,195963300,195959282	195990315,195986604,195985789,195984737,195984276,195982310,195979866,195977251,195975900,195974566,195971444,195967990,195967644,195965542,195963421,195960086	Gene ID= ENSG00000185485.14 TPM= 2.92 Transcript Type= NA
chr3	195959748	195990315	195959748	195990315	-	transcript8343.chr3.nic@SDHAP1	transcript8343.chr3.nic	transcribed_unprocessed_pseudogene	195990190,195986519,195985627,195984594,195984112,195982162,195979744,195977083,195975705,195974397,195971323,195967879,195967514,195965429,195963300,195959748	195990315,195986604,195985789,195984737,195984276,195982352,195979866,195977251,195975900,195974566,195971444,195967990,195967644,195965542,195963421,195960086	Gene ID= ENSG00000185485.14 TPM= 2.34 Transcript Type= NA
chr3	195959748	195990302	195959748	195990302	-	transcript8349.chr3.nnic@SDHAP1	transcript8349.chr3.nnic	transcribed_unprocessed_pseudogene	195990190,195984112,195982162,195979744,195977083,195975705,195974397,195971323,195968219,195967879,195967514,195965429,195963300,195959748	195990302,195984276,195982310,195979866,195977251,195975900,195974566,195971444,195968385,195967990,195967644,195965542,195963421,195960086	Gene ID= ENSG00000185485.14 TPM= 3.5 Transcript Type= NA
chr3	195963104	195990302	195963104	195990302	-	transcript8356.chr3.nnic@SDHAP1	transcript8356.chr3.nnic	transcribed_unprocessed_pseudogene	195990190,195984112,195982162,195979744,195977083,195975705,195974397,195971323,195967879,195967514,195965429,195963104	195990302,195984276,195982310,195979866,195977251,195975900,195974566,195971444,195968385,195967644,195965542,195963421	Gene ID= ENSG00000185485.14 TPM= 2.34 Transcript Type= NA
chr3	195963104	195990302	195963104	195990302	-	transcript8359.chr3.nnic@SDHAP1	transcript8359.chr3.nnic	transcribed_unprocessed_pseudogene	195990190,195984112,195982162,195979744,195977083,195975705,195974397,195971323,195967879,195967514,195963104	195990302,195984276,195982310,195979866,195977251,195975900,195974566,195971444,195967990,195967644,195965542	Gene ID= ENSG00000185485.14 TPM= 2.34 Transcript Type= NA
chr3	196049284	196082189	196049284	196082189	-	ENST00000360110.8@TFRC	ENST00000360110.8	protein_coding	196082043,196077064,196075159,196073930,196072003,196071396,196069455,196068032,196067518,196065443,196064309,196062854,196062582,196060180,196058574,196058284,196055080,196053418,196049284	196082189,196077122,196075360,196074125,196072152,196071498,196069568,196068130,196067657,196065600,196064428,196062939,196062645,196060247,196058632,196058365,196055301,196053558,196052184	Gene ID= ENSG00000072274.12 TPM= 204.53 Transcript Type= protein_coding
chr3	196049284	196060826	196049284	196060826	-	transcript8384.chr3.nic@TFRC	transcript8384.chr3.nic	protein_coding	196060180,196058574,196058284,196055080,196053418,196049284	196060826,196058632,196058365,196055301,196053558,196052184	Gene ID= ENSG00000072274.12 TPM= 16.54 Transcript Type= NA
chr3	196049284	196082094	196049284	196082094	-	ENST00000420415.5@TFRC	ENST00000420415.5	protein_coding	196082043,196077064,196073930,196072003,196071396,196069455,196068032,196067518,196065443,196064309,196062854,196062582,196060180,196058574,196058284,196055080,196053418,196049284	196082094,196077122,196074125,196072152,196071498,196069568,196068130,196067657,196065600,196064428,196062939,196062645,196060247,196058632,196058365,196055301,196053558,196052184	Gene ID= ENSG00000072274.12 TPM= 17.13 Transcript Type= protein_coding
chr3	196054819	196056860	196054819	196056860	+	transcript8386.chr3.nnic@NA	transcript8386.chr3.nnic	NA	196054819	196056860	Gene ID= novel_gene_chr3_8387 TPM= 2.34 Transcript Type= NA
chr3	196233237	196238470	196233237	196238470	-	transcript8405.chr3.nnic@NA	transcript8405.chr3.nnic	NA	196233237	196238470	Gene ID= novel_gene_chr3_8406 TPM= 3.5 Transcript Type= NA
chr3	196347662	196432474	196347662	196432474	-	ENST00000296328.8@UBXN7	ENST00000296328.8	protein_coding	196432327,196407246,196402952,196393554,196391813,196371896,196369421,196368028,196362294,196361844,196347662	196432474,196407393,196403019,196393619,196391925,196372042,196369511,196368155,196362687,196361923,196356846	Gene ID= ENSG00000163960.11 TPM= 5.84 Transcript Type= protein_coding
chr3	196468783	196503768	196468783	196503768	-	ENST00000318037.3@RNF168	ENST00000318037.3	protein_coding	196502873,196488607,196487399,196483770,196475231,196468783	196503768,196488683,196487578,196483891,196475312,196472772	Gene ID= ENSG00000163961.4 TPM= 4.67 Transcript Type= protein_coding
chr3	196568611	196587287	196568611	196587287	+	ENST00000440469.1@FBXO45	ENST00000440469.1	protein_coding	196568611,196577453,196584133	196568787,196577809,196587287	Gene ID= ENSG00000174013.7 TPM= 3.5 Transcript Type= protein_coding
chr3	196568688	196589059	196568688	196589059	+	ENST00000311630.6@FBXO45	ENST00000311630.6	protein_coding	196568688,196577453,196584133	196569302,196577809,196589059	Gene ID= ENSG00000174013.7 TPM= 2.34 Transcript Type= protein_coding
chr3	196712316	196734901	196712316	196734901	+	transcript8430.chr3.nic@PIGX	transcript8430.chr3.nic	protein_coding	196712316,196716858,196722415,196726655,196727923,196730992,196733759	196712644,196716921,196722556,196726771,196728136,196731092,196734901	Gene ID= ENSG00000163964.14 TPM= 5.84 Transcript Type= NA
chr3	196739922	196832488	196739922	196832488	+	transcript8448.chr3.nnic@PAK2	transcript8448.chr3.nnic	protein_coding	196739922,196765921,196782626,196801927,196803017,196805352,196806579,196807782,196810590,196812219,196812739,196814451,196818057,196820371,196827196,196828319	196740157,196766039,196782833,196802027,196803164,196805383,196806686,196807914,196810653,196812267,196812851,196814568,196818156,196820567,196827333,196832488	Gene ID= ENSG00000180370.10 TPM= 3.5 Transcript Type= NA
chr3	196739857	196832647	196739857	196832647	+	ENST00000327134.7@PAK2	ENST00000327134.7	protein_coding	196739857,196782626,196801927,196803017,196805352,196806579,196807782,196810590,196812219,196812739,196814451,196818057,196820371,196827196,196828319	196740157,196782833,196802027,196803164,196805383,196806686,196807914,196810653,196812267,196812851,196814568,196818156,196820567,196827333,196832647	Gene ID= ENSG00000180370.10 TPM= 5.84 Transcript Type= protein_coding
chr3	196749991	196751468	196749991	196751468	-	transcript8458.chr3.nnic@NA	transcript8458.chr3.nnic	NA	196749991	196751468	Gene ID= novel_gene_chr3_8459 TPM= 3.5 Transcript Type= NA
chr3	196867901	196933512	196867901	196933512	+	transcript8460.chr3.nnic@SENP5	transcript8460.chr3.nnic	protein_coding	196867901,196885151,196899666,196899924,196900365,196903533,196907642,196923414,196927796,196929633,196930813	196868073,196886694,196899771,196900062,196900412,196903610,196907886,196923551,196927879,196929683,196933512	Gene ID= ENSG00000119231.10 TPM= 4.67 Transcript Type= NA
chr3	196867856	196934714	196867856	196934714	+	ENST00000323460.9@SENP5	ENST00000323460.9	protein_coding	196867856,196885151,196899666,196899924,196900365,196903533,196923414,196927796,196929633,196930813	196868073,196886694,196899771,196900062,196900412,196903610,196923551,196927879,196929683,196934714	Gene ID= ENSG00000119231.10 TPM= 43.2 Transcript Type= protein_coding
chr3	196935409	196942594	196935409	196942594	-	ENST00000428425.1@NCBP2	ENST00000428425.1	protein_coding	196942370,196939251,196937510,196935409	196942594,196939432,196937648,196937082	Gene ID= ENSG00000114503.10 TPM= 5.84 Transcript Type= nonsense_mediated_decay
chr3	196935407	196942597	196935407	196942597	-	ENST00000321256.9@NCBP2	ENST00000321256.9	protein_coding	196942426,196939251,196937510,196935407	196942597,196939432,196937648,196937082	Gene ID= ENSG00000114503.10 TPM= 73.56 Transcript Type= protein_coding
chr3	196935407	196942560	196935407	196942560	-	ENST00000463783.1@NCBP2	ENST00000463783.1	protein_coding	196942426,196935407	196942560,196939432	Gene ID= ENSG00000114503.10 TPM= 2.34 Transcript Type= retained_intron
chr3	196942623	196943540	196942623	196943540	+	ENST00000602845.1@NCBP2-AS2	ENST00000602845.1	protein_coding	196942623	196943540	Gene ID= ENSG00000270170.1 TPM= 40.87 Transcript Type= protein_coding
chr3	196942661	196944942	196942661	196944942	+	transcript8478.chr3.nnic@NA	transcript8478.chr3.nnic	NA	196942661	196944942	Gene ID= novel_gene_chr3_8479 TPM= 2.34 Transcript Type= NA
chr3	196951538	196969060	196951538	196969060	-	ENST00000238138.2@PIGZ	ENST00000238138.2	protein_coding	196968687,196951538	196969060,196952031	Gene ID= ENSG00000119227.7 TPM= 1.17 Transcript Type= retained_intron
chr3	196946343	196968833	196946343	196968833	-	ENST00000412723.5@PIGZ	ENST00000412723.5	protein_coding	196968687,196951821,196946343	196968833,196952031,196948685	Gene ID= ENSG00000119227.7 TPM= 4.67 Transcript Type= protein_coding
chr3	197014893	197029840	197014893	197029840	-	transcript8487.chr3.nic@MELTF	transcript8487.chr3.nic	protein_coding	197029654,197027756,197026660,197024303,197022957,197021404,197017103,197016189,197014893	197029840,197027910,197026759,197024485,197023113,197021471,197017290,197016369,197015516	Gene ID= ENSG00000163975.11 TPM= 2.34 Transcript Type= NA
chr3	197001740	197029816	197001740	197029816	-	ENST00000296350.9@MELTF	ENST00000296350.9	protein_coding	197029654,197027756,197026660,197024303,197022957,197021404,197017103,197016189,197015365,197010698,197009618,197008809,197008657,197006549,197003901,197001740	197029816,197027910,197026759,197024485,197023113,197021471,197017290,197016369,197015516,197010794,197009812,197008965,197008724,197006736,197004099,197003451	Gene ID= ENSG00000163975.11 TPM= 9.34 Transcript Type= protein_coding
chr3	197003734	197004739	197003734	197004739	+	transcript8493.chr3.nnic@NA	transcript8493.chr3.nnic	NA	197003734	197004739	Gene ID= novel_gene_chr3_8494 TPM= 3.5 Transcript Type= NA
chr3	197042560	197298151	197042560	197298151	-	transcript8502.chr3.nic@DLG1	transcript8502.chr3.nic	protein_coding	197297673,197297186,197296346,197282679,197194425,197161640,197149743,197142718,197140140,197138222,197136542,197130527,197119410,197115927,197104903,197090912,197085580,197081051,197076586,197069219,197066704,197065708,197065276,197059889,197051577,197042560	197298151,197297235,197296477,197282845,197194589,197161738,197149796,197142768,197140264,197138391,197136678,197130671,197119530,197116083,197105005,197091026,197085756,197081117,197076685,197069260,197066754,197065809,197065448,197059998,197051668,197044729	Gene ID= ENSG00000075711.20 TPM= 3.12 Transcript Type= NA
chr3	197042927	197298145	197042927	197298145	-	transcript8503.chr3.nic@DLG1	transcript8503.chr3.nic	protein_coding	197297544,197297186,197296346,197282679,197194425,197161640,197149743,197142718,197140140,197138222,197136542,197130527,197119410,197115927,197104903,197090912,197085580,197081051,197076586,197069219,197066704,197065708,197065276,197059889,197051577,197042927	197298145,197297235,197296477,197282845,197194589,197161738,197149796,197142768,197140264,197138391,197136678,197130671,197119530,197116083,197105005,197091026,197085756,197081117,197076685,197069260,197066754,197065809,197065448,197059998,197051668,197044729	Gene ID= ENSG00000075711.20 TPM= 5.06 Transcript Type= NA
chr3	197042927	197298151	197042927	197298151	-	transcript8512.chr3.nic@DLG1	transcript8512.chr3.nic	protein_coding	197297673,197297186,197296346,197282679,197194425,197149743,197142718,197140140,197138222,197136542,197130527,197119410,197115927,197104903,197090912,197085580,197081051,197075837,197069219,197066704,197065708,197065276,197059889,197051577,197042927	197298151,197297235,197296477,197282845,197194589,197149796,197142768,197140264,197138391,197136678,197130671,197119530,197116083,197105005,197091026,197085756,197081117,197075870,197069260,197066754,197065809,197065448,197059998,197051668,197044729	Gene ID= ENSG00000075711.20 TPM= 4.09 Transcript Type= NA
chr3	197042927	197298151	197042927	197298151	-	transcript8514.chr3.nic@DLG1	transcript8514.chr3.nic	protein_coding	197297673,197297186,197296346,197282679,197194425,197149743,197142718,197140140,197138222,197136542,197130527,197119410,197115927,197104903,197090912,197085580,197081051,197076586,197069219,197066704,197065708,197065276,197059889,197051577,197042927	197298151,197297235,197296477,197282845,197194589,197149796,197142768,197140264,197138391,197136678,197130671,197119530,197116083,197105005,197091026,197085756,197081117,197076685,197069260,197066754,197065809,197065448,197059998,197051668,197044729	Gene ID= ENSG00000075711.20 TPM= 6.81 Transcript Type= NA
chr3	197576086	197627908	197576086	197627908	-	transcript8533.chr3.nnic@AC132008.2	transcript8533.chr3.nnic	transcribed_unprocessed_pseudogene	197627780,197624112,197623220,197621704,197619740,197615564,197613225,197593091,197579203,197576086	197627908,197624197,197623382,197621868,197619888,197615685,197613318,197593159,197579299,197578171	Gene ID= ENSG00000214135.8 TPM= 2.34 Transcript Type= NA
chr3	197601725	197627908	197601725	197627908	-	transcript8542.chr3.nnic@AC132008.2	transcript8542.chr3.nnic	transcribed_unprocessed_pseudogene	197627780,197624112,197623220,197622187,197621704,197619740,197615564,197613225,197601725	197627908,197624197,197623382,197622330,197621868,197619888,197615685,197613318,197603717	Gene ID= ENSG00000214135.8 TPM= 6.42 Transcript Type= NA
chr3	197601725	197627908	197601725	197627908	-	transcript8543.chr3.nnic@AC132008.2	transcript8543.chr3.nnic	transcribed_unprocessed_pseudogene	197627780,197624112,197623220,197621704,197619740,197615564,197613225,197601725	197627908,197624197,197623382,197621868,197619888,197615685,197613283,197603717	Gene ID= ENSG00000214135.8 TPM= 4.09 Transcript Type= NA
chr3	197612641	197627908	197612641	197627908	-	transcript8553.chr3.nic@AC132008.2	transcript8553.chr3.nic	transcribed_unprocessed_pseudogene	197627780,197624112,197623220,197621704,197619740,197615564,197612641	197627908,197624197,197623382,197621868,197619888,197615685,197613318	Gene ID= ENSG00000214135.8 TPM= 3.5 Transcript Type= NA
chr3	197614027	197627908	197614027	197627908	-	transcript8554.chr3.nic@AC132008.2	transcript8554.chr3.nic	transcribed_unprocessed_pseudogene	197627780,197624112,197623220,197621704,197619740,197615564,197614027	197627908,197624197,197623382,197621868,197619888,197615685,197614622	Gene ID= ENSG00000214135.8 TPM= 3.5 Transcript Type= NA
chr3	197671983	197674460	197671983	197674460	-	transcript8557.chr3.nnic@NA	transcript8557.chr3.nnic	NA	197671983	197674460	Gene ID= novel_gene_chr3_8558 TPM= 9.34 Transcript Type= NA
chr3	197737109	197738452	197737109	197738452	+	transcript8568.chr3.nnic@NA	transcript8568.chr3.nnic	NA	197737109	197738452	Gene ID= novel_gene_chr3_8569 TPM= 2.34 Transcript Type= NA
chr3	197749750	197787596	197749750	197787596	+	ENST00000241502.8@FYTTD1	ENST00000241502.8	protein_coding	197749750,197756426,197768439,197770132,197773403,197774149,197776927,197778338,197781811	197750074,197756557,197768587,197770244,197773499,197774210,197777001,197778464,197787596	Gene ID= ENSG00000122068.12 TPM= 8.17 Transcript Type= protein_coding
chr3	197749883	197784298	197749883	197784298	+	transcript8566.chr3.nnic@FYTTD1	transcript8566.chr3.nnic	protein_coding	197749883,197756426,197768439,197770132,197773403,197774149,197776927,197778390,197781811	197750074,197756557,197768587,197770244,197773499,197774210,197777001,197778464,197784298	Gene ID= ENSG00000122068.12 TPM= 29.19 Transcript Type= NA
chr3	197791235	197833391	197791235	197833391	+	transcript8588.chr3.nic@LRCH3	transcript8588.chr3.nic	protein_coding	197791235,197814908,197817176,197820325,197826878,197829564,197830770,197832197	197791540,197815052,197817302,197820430,197827014,197829673,197830863,197833391	Gene ID= ENSG00000186001.12 TPM= 3.5 Transcript Type= NA
chr3	197949987	197956610	197949987	197956610	+	ENST00000464167.5@RPL35A	ENST00000464167.5	protein_coding	197949987,197950936,197951159,197954003,197955750	197950221,197950978,197951311,197954147,197956610	Gene ID= ENSG00000182899.14 TPM= 303.57 Transcript Type= protein_coding
chr3	197950194	197955851	197950194	197955851	+	ENST00000448864.5@RPL35A	ENST00000448864.5	protein_coding	197950194,197950936,197951159,197954003,197955750	197950299,197950978,197951311,197954147,197955851	Gene ID= ENSG00000182899.14 TPM= 16.93 Transcript Type= protein_coding
chr3	197950206	197955817	197950206	197955817	+	ENST00000429437.5@RPL35A	ENST00000429437.5	protein_coding	197950206,197950936,197951159,197954003,197955750	197950221,197950978,197951328,197954147,197955817	Gene ID= ENSG00000182899.14 TPM= 294.82 Transcript Type= nonsense_mediated_decay
chr3	197960200	198043720	197960200	198043720	+	ENST00000330198.8@LMLN	ENST00000330198.8	protein_coding	197960200,197974377,197975042,197976029,197976598,197980326,197983943,197985796,197990559,197996175,197999266,198019253,198021446,198024658,198035833,198038567	197960440,197974474,197975072,197976111,197976715,197980504,197984048,197985890,197990676,197996282,197999342,198019385,198021605,198024788,198036043,198043720	Gene ID= ENSG00000185621.11 TPM= 1.17 Transcript Type= protein_coding
chr4	53285	88211	53285	88211	+	ENST00000610261.5@ZNF595	ENST00000610261.5	protein_coding	53285,59430,60058,85731	53491,59556,60153,88211	Gene ID= ENSG00000272602.5 TPM= 18.68 Transcript Type= protein_coding
chr4	53322	87522	53322	87522	+	transcript8.chr4.nnic@ZNF595	transcript8.chr4.nnic	protein_coding	53322,59430,60058,85731	54101,59556,60153,87522	Gene ID= ENSG00000272602.5 TPM= 2.34 Transcript Type= NA
chr4	124500	134711	124500	134711	+	transcript17.chr4.nnic@ZNF718	transcript17.chr4.nnic	protein_coding	124500,126848,127011,134170	125296,126921,127127,134711	Gene ID= ENSG00000250312.6 TPM= 2.34 Transcript Type= NA
chr4	124480	163989	124480	163989	+	ENST00000510175.5@ZNF718	ENST00000510175.5	protein_coding	124480,130788,131410,160912	124673,130914,131505,163989	Gene ID= ENSG00000250312.6 TPM= 1.17 Transcript Type= protein_coding
chr4	439988	474171	439988	474171	-	transcript39.chr4.nnic@ABCA11P	transcript39.chr4.nnic	transcribed_processed_pseudogene	473981,472575,467617,439988	474171,472701,467681,444432	Gene ID= ENSG00000251595.7 TPM= 3.5 Transcript Type= NA
chr4	499202	539529	499202	539529	+	transcript53.chr4.nic@PIGG	transcript53.chr4.nic	protein_coding	499202,500396,505718,507405,508829,515973,521056,521660,523459,527039,530436,533818,539153	499725,500601,505927,507593,508970,516185,521273,521941,523913,527230,530745,533981,539529	Gene ID= ENSG00000174227.15 TPM= 10.51 Transcript Type= NA
chr4	499198	539529	499198	539529	+	transcript63.chr4.nnic@PIGG	transcript63.chr4.nnic	protein_coding	499198,500396,507405,508829,515973,521056,521660,523459,527039,530436,533818,539153	499489,500601,507593,508970,516185,521273,521941,523913,527230,530745,533981,539529	Gene ID= ENSG00000174227.15 TPM= 3.5 Transcript Type= NA
chr4	499198	527540	499198	527540	+	transcript67.chr4.nic@PIGG	transcript67.chr4.nic	protein_coding	499198,500396,505718,507405,508829,515973,521056,521660,523459,527039	499489,500601,505927,507593,508970,516185,521273,521941,523913,527540	Gene ID= ENSG00000174227.15 TPM= 2.34 Transcript Type= NA
chr4	499198	522843	499198	522843	+	transcript74.chr4.nic@PIGG	transcript74.chr4.nic	protein_coding	499198,500396,505718,507405,508829,515973,521056,521660	499489,500601,505927,507593,508970,516185,521273,522843	Gene ID= ENSG00000174227.15 TPM= 4.67 Transcript Type= NA
chr4	499198	516878	499198	516878	+	transcript78.chr4.nic@PIGG	transcript78.chr4.nic	protein_coding	499198,500396,505718,507405,508829,515973	499489,500601,505927,507593,508970,516878	Gene ID= ENSG00000174227.15 TPM= 2.34 Transcript Type= NA
chr4	499202	511317	499202	511317	+	transcript80.chr4.nic@PIGG	transcript80.chr4.nic	protein_coding	499202,500396,505718,507405,508829	499725,500601,505927,507593,511317	Gene ID= ENSG00000174227.15 TPM= 2.34 Transcript Type= NA
chr4	499237	539528	499237	539528	+	ENST00000504346.5@PIGG	ENST00000504346.5	protein_coding	499237,500396,505718,507405,508829,515973,521056,521660,523459,527039,530436,533818,539153	499298,500601,505927,507593,508970,516185,521273,521941,523913,527230,530745,533981,539528	Gene ID= ENSG00000174227.15 TPM= 3.5 Transcript Type= protein_coding
chr4	499230	539529	499230	539529	+	ENST00000453061.6@PIGG	ENST00000453061.6	protein_coding	499230,500396,505718,507405,508829,515973,521056,521660,523459,527039,530436,533818,539153	499489,500601,505927,507593,508970,516185,521273,521941,523913,527230,530745,533981,539529	Gene ID= ENSG00000174227.15 TPM= 47.87 Transcript Type= protein_coding
chr4	499221	539529	499221	539529	+	ENST00000310340.9@PIGG	ENST00000310340.9	protein_coding	499221,500396,505718,507405,508829,515973,521056,521660,523459,527039,530436,533818,539153	499489,500601,505927,507593,508970,516185,521249,521941,523913,527230,530745,533981,539529	Gene ID= ENSG00000174227.15 TPM= 5.84 Transcript Type= protein_coding
chr4	663696	670753	663696	670753	+	transcript87.chr4.nic@PDE6B	transcript87.chr4.nic	protein_coding	663696,664114,664881,665255,666531,667856,670046	663870,664221,664944,665329,666614,668006,670753	Gene ID= ENSG00000133256.12 TPM= 2.72 Transcript Type= NA
chr4	663691	670753	663691	670753	+	transcript88.chr4.nic@PDE6B	transcript88.chr4.nic	protein_coding	663691,664881,665255,666531,667856,670046	664221,664944,665329,666614,668006,670753	Gene ID= ENSG00000133256.12 TPM= 3.89 Transcript Type= NA
chr4	661549	664210	661549	664210	-	transcript92.chr4.nnic@AC107464.3	transcript92.chr4.nnic	antisense_RNA	663202,662539,661549	664210,662604,662148	Gene ID= ENSG00000272927.1 TPM= 2.34 Transcript Type= NA
chr4	661195	664210	661195	664210	-	transcript93.chr4.nnic@AC107464.3	transcript93.chr4.nnic	antisense_RNA	663202,661195	664210,662604	Gene ID= ENSG00000272927.1 TPM= 2.34 Transcript Type= NA
chr4	661550	664172	661550	664172	-	transcript94.chr4.nnic@NA	transcript94.chr4.nnic	NA	661550	664172	Gene ID= novel_gene_chr4_95 TPM= 2.34 Transcript Type= NA
chr4	672438	674330	672438	674330	-	ENST00000505852.1@ATP5I	ENST00000505852.1	protein_coding	674212,673303,672438	674330,673401,672519	Gene ID= ENSG00000169020.9 TPM= 2.34 Transcript Type= processed_transcript
chr4	672436	674338	672436	674338	-	ENST00000304312.4@ATP5I	ENST00000304312.4	protein_coding	674212,673912,673303,672436	674338,673966,673401,672519	Gene ID= ENSG00000169020.9 TPM= 129.6 Transcript Type= protein_coding
chr4	672436	674121	672436	674121	-	ENST00000515202.5@ATP5I	ENST00000515202.5	protein_coding	673912,673303,672436	674121,673401,672519	Gene ID= ENSG00000169020.9 TPM= 2.34 Transcript Type= retained_intron
chr4	672438	689337	672438	689337	-	transcript97.chr4.nnic@MFSD7	transcript97.chr4.nnic	protein_coding	688993,686532,686089,685835,684719,684483,683609,683210,682781,674212,673912,673303,672438	689337,686690,686302,685911,684856,684599,683761,683367,682890,676912,673966,673401,672519	Gene ID= ENSG00000169026.12 TPM= 14.01 Transcript Type= NA
chr4	681829	689532	681829	689532	-	transcript110.chr4.nic@MFSD7	transcript110.chr4.nic	protein_coding	688993,686532,684719,684483,683609,683210,682781,681829	689532,686690,686302,684599,683761,683367,682890,682376	Gene ID= ENSG00000169026.12 TPM= 7.39 Transcript Type= NA
chr4	681829	689451	681829	689451	-	transcript114.chr4.nic@MFSD7	transcript114.chr4.nic	protein_coding	688993,684719,684483,683609,683210,682781,681829	689451,686690,684599,683761,683367,682890,682376	Gene ID= ENSG00000169026.12 TPM= 9.73 Transcript Type= NA
chr4	681858	689191	681858	689191	-	ENST00000515118.5@MFSD7	ENST00000515118.5	protein_coding	688993,686532,684719,684483,683609,683210,682781,681858	689191,686690,684856,684602,683761,683367,682890,682376	Gene ID= ENSG00000169026.12 TPM= 4.67 Transcript Type= protein_coding
chr4	681831	689143	681831	689143	-	ENST00000404286.6@MFSD7	ENST00000404286.6	protein_coding	688993,686532,686089,685835,684719,684483,683609,683210,682781,681831	689143,686690,686302,685911,684856,684602,683761,683367,682890,682376	Gene ID= ENSG00000169026.12 TPM= 1.17 Transcript Type= protein_coding
chr4	681207	682018	681207	682018	+	transcript121.chr4.nnic@MYL5	transcript121.chr4.nnic	protein_coding	681207,681893	681321,682018	Gene ID= ENSG00000215375.6 TPM= 2.34 Transcript Type= NA
chr4	673941	682022	673941	682022	+	ENST00000505477.5@MYL5	ENST00000505477.5	protein_coding	673941,678658,678958,679914,680509,681092,681893	673977,678765,679033,680018,680587,681140,682022	Gene ID= ENSG00000215375.6 TPM= 1.17 Transcript Type= protein_coding
chr4	705765	770640	705765	770640	+	ENST00000362003.9@PCGF3	ENST00000362003.9	protein_coding	705765,730630,730970,733672,734931,737466,743474,744600,761279,764984,766032	705970,730668,731110,733789,735027,737521,743584,744688,761416,765064,770640	Gene ID= ENSG00000185619.18 TPM= 2.34 Transcript Type= protein_coding
chr4	705784	734479	705784	734479	+	ENST00000400151.6@PCGF3	ENST00000400151.6	protein_coding	705784,730630,730970,733672	705970,730668,731110,734479	Gene ID= ENSG00000185619.18 TPM= 3.5 Transcript Type= protein_coding
chr4	771527	772587	771527	772587	+	transcript137.chr4.nnic@NA	transcript137.chr4.nnic	NA	771527	772587	Gene ID= novel_gene_chr4_138 TPM= 3.5 Transcript Type= NA
chr4	776723	779481	776723	779481	-	transcript144.chr4.nnic@NA	transcript144.chr4.nnic	NA	776723	779481	Gene ID= novel_gene_chr4_145 TPM= 2.34 Transcript Type= NA
chr4	849277	932403	849277	932403	-	transcript148.chr4.nic@GAK	transcript148.chr4.nic	protein_coding	932043,913607,912735,911673,904637,898033,896460,893874,893377,890532,888847,884037,883315,882697,881907,877615,877090,876530,870711,868539,866956,866364,865122,859606,851750,850936,849892,849277	932403,913668,912794,911787,904779,898158,896549,894009,893489,890622,888970,884086,883463,882819,882040,877809,877207,876609,870904,868685,867432,866501,865244,859722,851974,851084,850068,849774	Gene ID= ENSG00000178950.16 TPM= 27.57 Transcript Type= NA
chr4	849277	932403	849277	932403	-	transcript159.chr4.nnic@GAK	transcript159.chr4.nnic	protein_coding	932043,913607,912735,911673,904637,898033,896460,893874,893377,890532,888847,884037,883315,882697,881907,877615,877090,876530,870711,866956,866364,865122,859606,851750,850936,849892,849277	932403,913668,912794,911787,904779,898158,896549,894009,893489,890622,888970,884086,883463,882819,882040,877809,877207,876609,870904,867432,866501,865244,859722,851974,851084,850068,849774	Gene ID= ENSG00000178950.16 TPM= 8.1 Transcript Type= NA
chr4	849277	932403	849277	932403	-	transcript164.chr4.nic@GAK	transcript164.chr4.nic	protein_coding	932043,913607,912735,911673,904637,898033,896460,893874,893377,890532,888847,884037,883315,882697,881907,877615,877090,876530,870711,868539,866956,866364,865122,859606,850936,849892,849277	932403,913668,912794,911787,904779,898158,896549,894009,893489,890622,888970,884086,883463,882819,882040,877809,877207,876609,870904,868685,867432,866501,865244,859722,851974,850068,849774	Gene ID= ENSG00000178950.16 TPM= 9.88 Transcript Type= NA
chr4	849277	932319	849277	932319	-	transcript165.chr4.nic@GAK	transcript165.chr4.nic	protein_coding	932043,913607,904637,898033,896460,893874,893377,890532,888847,884037,883315,882697,881907,877615,877090,876530,870711,868539,866956,866364,865122,859606,851750,850936,849892,849277	932319,913668,904779,898158,896549,894009,893489,890622,888970,884086,883463,882819,882040,877809,877207,876609,870904,868685,867432,866534,865244,859722,851974,851084,850068,849774	Gene ID= ENSG00000178950.16 TPM= 45.86 Transcript Type= NA
chr4	849278	932373	849278	932373	-	ENST00000511163.5@GAK	ENST00000511163.5	protein_coding	932043,904637,898033,896460,893874,893377,890532,888847,884037,883315,882697,881907,877615,877090,876530,870711,868539,866956,866364,865122,859606,851750,850936,849892,849278	932373,904779,898158,896549,894009,893489,890622,888970,884086,883463,882819,882040,877809,877207,876609,870904,868685,867432,866534,865244,859722,851974,851084,850068,849774	Gene ID= ENSG00000178950.16 TPM= 12.43 Transcript Type= protein_coding
chr4	849278	932298	849278	932298	-	ENST00000314167.8@GAK	ENST00000314167.8	protein_coding	932043,913607,912735,911673,904637,898033,896460,893874,893377,890532,888847,884037,883315,882697,881907,877615,877090,876530,870711,868539,866956,866364,865122,859606,851750,850936,849892,849278	932298,913668,912794,911787,904779,898158,896549,894009,893489,890622,888970,884086,883463,882819,882040,877809,877207,876609,870904,868685,867432,866534,865244,859722,851974,851084,850068,849774	Gene ID= ENSG00000178950.16 TPM= 50.97 Transcript Type= protein_coding
chr4	901028	902249	901028	902249	+	transcript175.chr4.nnic@NA	transcript175.chr4.nnic	NA	901028	902249	Gene ID= novel_gene_chr4_176 TPM= 2.34 Transcript Type= NA
chr4	932404	958656	932404	958656	+	ENST00000513952.5@TMEM175	ENST00000513952.5	protein_coding	932404,947709,948116,948411,950421,951207,951646,952367,953190,955405,955755,957824	932540,947892,948154,948615,950518,951258,951717,952450,953354,955483,955890,958656	Gene ID= ENSG00000127419.16 TPM= 3.16 Transcript Type= nonsense_mediated_decay
chr4	932417	958656	932417	958656	+	transcript188.chr4.nic@TMEM175	transcript188.chr4.nic	protein_coding	932417,947709,948116,948411,950421,951207,951682,952367,953190,955405,955755,957824	932540,947892,948154,948615,950518,951258,951717,952450,953354,955483,955890,958656	Gene ID= ENSG00000127419.16 TPM= 11.8 Transcript Type= NA
chr4	932387	958656	932387	958656	+	ENST00000264771.8@TMEM175	ENST00000264771.8	protein_coding	932387,947709,948116,950421,951207,951682,952367,953190,955405,955755,957824	932540,947892,948154,950518,951258,951717,952450,953354,955483,955890,958656	Gene ID= ENSG00000127419.16 TPM= 26.98 Transcript Type= protein_coding
chr4	932417	958656	932417	958656	+	transcript192.chr4.nic@TMEM175	transcript192.chr4.nic	protein_coding	932417,947709,948116,950421,951207,951646,952367,953190,955405,955755,957824	932540,947892,948615,950518,951258,951717,952450,953354,955483,955890,958656	Gene ID= ENSG00000127419.16 TPM= 19.51 Transcript Type= NA
chr4	932417	958656	932417	958656	+	transcript199.chr4.nic@TMEM175	transcript199.chr4.nic	protein_coding	932417,947709,950421,951207,951682,952367,953190,955405,955755,957824	932540,948154,950518,951258,951717,952450,953354,955483,955890,958656	Gene ID= ENSG00000127419.16 TPM= 7.13 Transcript Type= NA
chr4	932417	958656	932417	958656	+	transcript200.chr4.nic@TMEM175	transcript200.chr4.nic	protein_coding	932417,947709,950421,951207,951682,952367,953190,955405,955755,957824	932540,948615,950518,951258,951717,952450,953354,955483,955890,958656	Gene ID= ENSG00000127419.16 TPM= 5.97 Transcript Type= NA
chr4	932472	958656	932472	958656	+	ENST00000438836.6@TMEM175	ENST00000438836.6	protein_coding	932472,947709,948116,950421,951207,951682,952367,953190,955405,955755,957824	932540,947892,948615,950518,951258,951717,952450,953354,955483,955890,958656	Gene ID= ENSG00000127419.16 TPM= 15.31 Transcript Type= retained_intron
chr4	958887	973585	958887	973585	-	transcript181.chr4.nic@DGKQ	transcript181.chr4.nic	protein_coding	973212,970993,968811,968479,968282,967880,967728,967549,967129,966964,966748,966466,966064,965491,965176,963139,962772,962435,961982,961688,961467,961049,958887	973585,971072,968910,968564,968407,968027,967802,967649,967361,967054,966802,966527,966078,965529,965291,963290,962920,962613,962082,961834,961578,961201,960721	Gene ID= ENSG00000145214.13 TPM= 7.01 Transcript Type= NA
chr4	958887	973556	958887	973556	-	ENST00000273814.7@DGKQ	ENST00000273814.7	protein_coding	973212,970993,968811,968479,968282,967880,967728,967549,967129,966964,966748,966466,965928,965491,965176,963139,962772,962435,961982,961688,961467,961049,958887	973556,971072,968910,968564,968407,968027,967802,967649,967361,967054,966802,966527,966078,965529,965291,963290,962920,962613,962082,961834,961578,961201,960721	Gene ID= ENSG00000145214.13 TPM= 24.52 Transcript Type= protein_coding
chr4	969614	973564	969614	973564	-	transcript219.chr4.nnic@NA	transcript219.chr4.nnic	NA	969614	973564	Gene ID= novel_gene_chr4_220 TPM= 4.67 Transcript Type= NA
chr4	984213	986923	984213	986923	-	transcript222.chr4.nnic@NA	transcript222.chr4.nnic	NA	984213	986923	Gene ID= novel_gene_chr4_223 TPM= 2.34 Transcript Type= NA
chr4	986997	1004506	986997	1004506	+	ENST00000247933.8@IDUA	ENST00000247933.8	protein_coding	986997,987809,1000612,1000882,1001468,1001679,1001982,1002269,1002732,1003036,1003345,1003549,1004012,1004260	987242,987949,1000697,1000989,1001563,1001881,1002161,1002485,1002944,1003157,1003470,1003625,1004112,1004506	Gene ID= ENSG00000127415.12 TPM= 32.31 Transcript Type= protein_coding
chr4	987010	1004506	987010	1004506	+	transcript226.chr4.nic@IDUA	transcript226.chr4.nic	protein_coding	987010,987809,1000612,1000882,1001468,1001679,1001982,1002269,1002732,1003036,1003549,1004012,1004260	987242,987949,1000697,1000989,1001563,1001881,1002161,1002485,1002944,1003470,1003625,1004112,1004506	Gene ID= ENSG00000127415.12 TPM= 11.68 Transcript Type= NA
chr4	987010	1004506	987010	1004506	+	transcript227.chr4.nic@IDUA	transcript227.chr4.nic	protein_coding	987010,987809,1000612,1000882,1001679,1001982,1002269,1002732,1003036,1003345,1003549,1004012,1004260	987242,987949,1000697,1001563,1001881,1002161,1002485,1002944,1003157,1003470,1003625,1004112,1004506	Gene ID= ENSG00000127415.12 TPM= 7.79 Transcript Type= NA
chr4	987010	1004506	987010	1004506	+	transcript232.chr4.nic@IDUA	transcript232.chr4.nic	protein_coding	987010,987809,1000612,1001679,1001982,1002269,1002732,1003036,1003345,1003549,1004012,1004260	987242,987949,1001563,1001881,1002161,1002485,1002944,1003157,1003470,1003625,1004112,1004506	Gene ID= ENSG00000127415.12 TPM= 8.96 Transcript Type= NA
chr4	994444	998429	994444	998429	-	transcript241.chr4.nnic@NA	transcript241.chr4.nnic	NA	994444	998429	Gene ID= novel_gene_chr4_242 TPM= 3.5 Transcript Type= NA
chr4	1071478	1113562	1071478	1113562	-	ENST00000382968.9@RNF212	ENST00000382968.9	protein_coding	1113356,1108343,1096765,1090782,1085896,1081567,1081419,1079643,1073599,1071478	1113562,1108404,1096839,1090838,1085954,1081619,1081467,1079688,1073662,1073140	Gene ID= ENSG00000178222.12 TPM= 2.34 Transcript Type= protein_coding
chr4	1166932	1172873	1166932	1172873	-	ENST00000290902.9@SPON2	ENST00000290902.9	protein_coding	1172544,1171852,1171263,1170999,1170402,1166932	1172873,1172074,1171486,1171190,1170576,1167656	Gene ID= ENSG00000159674.11 TPM= 82.9 Transcript Type= protein_coding
chr4	1166932	1172266	1166932	1172266	-	transcript258.chr4.nic@SPON2	transcript258.chr4.nic	protein_coding	1171263,1170999,1170402,1166932	1172266,1171190,1170576,1167656	Gene ID= ENSG00000159674.11 TPM= 5.84 Transcript Type= NA
chr4	1166932	1172501	1166932	1172501	-	transcript259.chr4.nic@SPON2	transcript259.chr4.nic	protein_coding	1171263,1170999,1166932	1172501,1171190,1170576	Gene ID= ENSG00000159674.11 TPM= 5.84 Transcript Type= NA
chr4	1211448	1248748	1211448	1248748	-	transcript272.chr4.nic@CTBP1	transcript272.chr4.nic	protein_coding	1248661,1241325,1238183,1228199,1225360,1215991,1214343,1213478,1212913,1211448	1248748,1241519,1238337,1228343,1225566,1216205,1214473,1213605,1213030,1212423	Gene ID= ENSG00000159692.15 TPM= 47.43 Transcript Type= NA
chr4	1211448	1249137	1211448	1249137	-	ENST00000290921.10@CTBP1	ENST00000290921.10	protein_coding	1248916,1238183,1228199,1225360,1215991,1214343,1213478,1212913,1211448	1249137,1238337,1228343,1225566,1216205,1214473,1213605,1213030,1212423	Gene ID= ENSG00000159692.15 TPM= 111.65 Transcript Type= protein_coding
chr4	1211448	1249112	1211448	1249112	-	ENST00000382952.7@CTBP1	ENST00000382952.7	protein_coding	1248916,1241325,1238183,1228199,1225360,1215991,1214343,1213478,1212913,1211448	1249112,1241519,1238337,1228343,1225566,1216205,1214473,1213605,1213030,1212423	Gene ID= ENSG00000159692.15 TPM= 419.89 Transcript Type= protein_coding
chr4	1249236	1252609	1249236	1252609	+	transcript297.chr4.nnic@NA	transcript297.chr4.nnic	NA	1249236	1252609	Gene ID= novel_gene_chr4_298 TPM= 17.51 Transcript Type= NA
chr4	1289840	1340137	1289840	1340137	+	transcript300.chr4.nic@MAEA	transcript300.chr4.nic	protein_coding	1289840,1311979,1315397,1322381,1327627,1328634,1332757,1336861,1338422,1339074	1289982,1312161,1315600,1322503,1327703,1330003,1332865,1336994,1338617,1340137	Gene ID= ENSG00000090316.15 TPM= 24.24 Transcript Type= NA
chr4	1289906	1340137	1289906	1340137	+	transcript307.chr4.nic@MAEA	transcript307.chr4.nic	protein_coding	1289906,1311979,1315397,1322381,1327627,1332757,1336861,1338422,1339074	1289982,1312161,1315600,1322503,1330003,1332865,1336994,1338617,1340137	Gene ID= ENSG00000090316.15 TPM= 11.4 Transcript Type= NA
chr4	1289851	1340137	1289851	1340137	+	ENST00000303400.8@MAEA	ENST00000303400.8	protein_coding	1289851,1311979,1315397,1322381,1327627,1332757,1336861,1338422,1339074	1289982,1312161,1315600,1322503,1327703,1332865,1336994,1338617,1340137	Gene ID= ENSG00000090316.15 TPM= 117.65 Transcript Type= protein_coding
chr4	1289891	1340136	1289891	1340136	+	ENST00000264750.10@MAEA	ENST00000264750.10	protein_coding	1289891,1311979,1315397,1327627,1332757,1336861,1338422,1339074	1289982,1312161,1315600,1327703,1332865,1336994,1338617,1340136	Gene ID= ENSG00000090316.15 TPM= 11.21 Transcript Type= protein_coding
chr4	1337200	1340136	1337200	1340136	+	transcript318.chr4.nnic@NA	transcript318.chr4.nnic	NA	1337200	1340136	Gene ID= novel_gene_chr4_319 TPM= 8.37 Transcript Type= NA
chr4	1347203	1388048	1347203	1388048	+	transcript327.chr4.nnic@UVSSA	transcript327.chr4.nnic	protein_coding	1347203,1348090,1349524,1351715,1353030,1354735,1355117,1366320,1375364,1376034,1380047,1383766,1385868	1347229,1348189,1349854,1351835,1353413,1354847,1355245,1366431,1375508,1376168,1380988,1383940,1388048	Gene ID= ENSG00000163945.16 TPM= 7.01 Transcript Type= NA
chr4	1547898	1550565	1547898	1550565	+	transcript335.chr4.nnic@NA	transcript335.chr4.nnic	NA	1547898	1550565	Gene ID= novel_gene_chr4_336 TPM= 4.67 Transcript Type= NA
chr4	1574062	1580253	1574062	1580253	-	ENST00000466692.1@AC147067.1	ENST00000466692.1	lincRNA	1580158,1574062	1580253,1574544	Gene ID= ENSG00000244459.2 TPM= 9.34 Transcript Type= lincRNA
chr4	1692800	1712318	1692800	1712318	-	transcript347.chr4.nic@SLBP	transcript347.chr4.nic	protein_coding	1712130,1711874,1703596,1700011,1699564,1694774,1692800	1712318,1711990,1703700,1700070,1699701,1696351,1693713	Gene ID= ENSG00000163950.12 TPM= 5.84 Transcript Type= NA
chr4	1692858	1712250	1692858	1712250	-	ENST00000318386.8@SLBP	ENST00000318386.8	protein_coding	1712130,1711874,1703596,1700011,1699564,1696202,1694774,1692858	1712250,1711990,1703700,1700091,1699701,1696351,1694840,1693713	Gene ID= ENSG00000163950.12 TPM= 4.67 Transcript Type= protein_coding
chr4	1712396	1713622	1712396	1713622	+	transcript366.chr4.nnic@NA	transcript366.chr4.nnic	NA	1712396	1713622	Gene ID= novel_gene_chr4_367 TPM= 3.5 Transcript Type= NA
chr4	1715953	1721351	1715953	1721351	-	transcript350.chr4.nnic@TMEM129	transcript350.chr4.nnic	protein_coding	1721019,1720633,1718152,1717516,1715953	1721351,1720934,1718626,1717675,1717428	Gene ID= ENSG00000168936.10 TPM= 30.82 Transcript Type= NA
chr4	1715953	1721099	1715953	1721099	-	transcript354.chr4.nnic@TMEM129	transcript354.chr4.nnic	protein_coding	1720439,1718152,1717516,1715953	1721099,1718626,1717675,1717428	Gene ID= ENSG00000168936.10 TPM= 7.09 Transcript Type= NA
chr4	1715952	1721358	1715952	1721358	-	ENST00000303277.6@TMEM129	ENST00000303277.6	protein_coding	1720633,1718152,1715952	1721358,1718626,1717428	Gene ID= ENSG00000168936.10 TPM= 8.44 Transcript Type= protein_coding
chr4	1715953	1721279	1715953	1721279	-	transcript360.chr4.nic@TMEM129	transcript360.chr4.nic	protein_coding	1720633,1717516,1715953	1721279,1718626,1717428	Gene ID= ENSG00000168936.10 TPM= 11.94 Transcript Type= NA
chr4	1715953	1721351	1715953	1721351	-	transcript362.chr4.nnic@TMEM129	transcript362.chr4.nnic	protein_coding	1721019,1720633,1715953	1721351,1720934,1718626	Gene ID= ENSG00000168936.10 TPM= 10.78 Transcript Type= NA
chr4	1715953	1721331	1715953	1721331	-	ENST00000382936.7@TMEM129	ENST00000382936.7	protein_coding	1720633,1718152,1717516,1715953	1721331,1718626,1717675,1717428	Gene ID= ENSG00000168936.10 TPM= 114.89 Transcript Type= protein_coding
chr4	1727569	1745171	1727569	1745171	+	transcript341.chr4.nic@TACC3	transcript341.chr4.nic	protein_coding	1727569,1730887,1731172,1735273,1735731,1737241,1737598,1739702,1739959,1740826,1744518,1744712,1744948	1728787,1730962,1731301,1735325,1735834,1737328,1737702,1739778,1740002,1740986,1744624,1744832,1745171	Gene ID= ENSG00000013810.18 TPM= 12.84 Transcript Type= NA
chr4	1721539	1745171	1721539	1745171	+	ENST00000313288.8@TACC3	ENST00000313288.8	protein_coding	1721539,1723421,1723728,1727708,1730887,1731172,1735273,1735731,1737241,1737598,1739702,1739959,1740826,1744518,1744712,1744948	1721643,1723583,1723870,1728787,1730962,1731301,1735325,1735834,1737328,1737702,1739778,1740002,1740986,1744624,1744832,1745171	Gene ID= ENSG00000013810.18 TPM= 17.51 Transcript Type= protein_coding
chr4	1804289	1808865	1804289	1808865	+	transcript383.chr4.nic@FGFR3	transcript383.chr4.nic	protein_coding	1804289,1805355,1805559,1805750,1806051,1806257,1806546,1806829,1807116	1804969,1805476,1805669,1805940,1806173,1806327,1806683,1806934,1808865	Gene ID= ENSG00000068078.17 TPM= 28.9 Transcript Type= NA
chr4	1793312	1808872	1793312	1808872	+	ENST00000440486.6@FGFR3	ENST00000440486.6	protein_coding	1793312,1793833,1799254,1799747,1801367,1801620,1801835,1803692,1804330,1804824,1805355,1805559,1805750,1806051,1806257,1806546,1806829,1807116	1793465,1794043,1799523,1799812,1801536,1801743,1802025,1803836,1804520,1804969,1805476,1805669,1805940,1806173,1806327,1806683,1806934,1808872	Gene ID= ENSG00000068078.17 TPM= 38.24 Transcript Type= protein_coding
chr4	1793312	1808872	1793312	1808872	+	ENST00000340107.8@FGFR3	ENST00000340107.8	protein_coding	1793312,1793833,1799254,1799747,1801367,1801620,1801835,1802914,1804330,1804824,1805355,1805559,1805750,1806051,1806257,1806546,1806829,1807116	1793465,1794043,1799523,1799812,1801536,1801743,1802025,1803064,1804520,1804969,1805476,1805669,1805940,1806173,1806327,1806683,1806934,1808872	Gene ID= ENSG00000068078.17 TPM= 39.41 Transcript Type= protein_coding
chr4	1793312	1808872	1793312	1808872	+	ENST00000412135.6@FGFR3	ENST00000412135.6	protein_coding	1793312,1793833,1799254,1799747,1801367,1801620,1801835,1804824,1805355,1805559,1805750,1806051,1806257,1806546,1806829,1807116	1793465,1794043,1799523,1799812,1801536,1801743,1802025,1804969,1805476,1805669,1805940,1806173,1806327,1806683,1806934,1808872	Gene ID= ENSG00000068078.17 TPM= 28.9 Transcript Type= protein_coding
chr4	1811479	1856247	1811479	1856247	-	ENST00000302787.2@LETM1	ENST00000302787.2	protein_coding	1855869,1849149,1841347,1836429,1834845,1832744,1825564,1823644,1822988,1822181,1819338,1816727,1815664,1811479	1856247,1849209,1841797,1836572,1834982,1832947,1825683,1823775,1823131,1822312,1819472,1816914,1815802,1814573	Gene ID= ENSG00000168924.14 TPM= 52.54 Transcript Type= protein_coding
chr4	1871127	1943437	1871127	1943437	+	transcript397.chr4.nnic@NSD2	transcript397.chr4.nnic	protein_coding	1871127,1899221,1900626,1904216,1916871,1918141,1930626,1935144,1938451,1939654,1942339	1871542,1899395,1901251,1904378,1917037,1918623,1930770,1935262,1938532,1939778,1943437	Gene ID= ENSG00000109685.17 TPM= 2.92 Transcript Type= NA
chr4	1871122	1943538	1871122	1943538	+	transcript402.chr4.nic@NSD2	transcript402.chr4.nic	protein_coding	1871122,1900626,1904216,1916871,1918141,1930626,1935144,1938451,1939654,1942339	1871542,1901251,1904378,1917037,1918623,1930770,1935262,1938532,1939778,1943538	Gene ID= ENSG00000109685.17 TPM= 5.25 Transcript Type= NA
chr4	1938417	1941938	1938417	1941938	+	transcript409.chr4.nic@NSD2	transcript409.chr4.nic	protein_coding	1938417,1939654	1938532,1941938	Gene ID= ENSG00000109685.17 TPM= 4.67 Transcript Type= NA
chr4	1982723	2008975	1982723	2008975	-	ENST00000411638.6@NELFA	ENST00000411638.6	protein_coding	2008750,1991544,1989708,1987918,1986272,1986114,1985776,1984808,1983848,1983596,1982723	2008975,1991715,1989869,1988007,1986402,1986183,1985864,1984919,1984113,1983695,1983503	Gene ID= ENSG00000185049.14 TPM= 73.56 Transcript Type= protein_coding
chr4	2041993	2043970	2041993	2043970	+	ENST00000409248.8@C4orf48	ENST00000409248.8	protein_coding	2041993,2042327,2042736,2043861	2042068,2042484,2042824,2043970	Gene ID= ENSG00000243449.6 TPM= 32.11 Transcript Type= protein_coding
chr4	2042050	2043964	2042050	2043964	+	ENST00000409860.1@C4orf48	ENST00000409860.1	protein_coding	2042050,2042327,2042736,2043861	2042175,2042484,2042824,2043964	Gene ID= ENSG00000243449.6 TPM= 1.75 Transcript Type= protein_coding
chr4	2231841	2242164	2231841	2242164	-	ENST00000443786.2@HAUS3	ENST00000443786.2	protein_coding	2242051,2241520,2240038,2238604,2236228,2231841	2242164,2241790,2241093,2239043,2236456,2232160	Gene ID= ENSG00000214367.7 TPM= 8.17 Transcript Type= protein_coding
chr4	2231841	2242129	2231841	2242129	-	transcript425.chr4.nic@HAUS3	transcript425.chr4.nic	protein_coding	2242051,2241520,2240038,2238604,2236228,2231841	2242129,2241837,2241093,2239043,2236456,2232160	Gene ID= ENSG00000214367.7 TPM= 2.34 Transcript Type= NA
chr4	2231197	2242141	2231197	2242141	-	transcript427.chr4.nic@HAUS3	transcript427.chr4.nic	protein_coding	2241520,2240038,2238604,2236228,2231197	2242141,2241093,2239043,2236456,2232160	Gene ID= ENSG00000214367.7 TPM= 5.84 Transcript Type= NA
chr4	2228349	2242133	2228349	2242133	-	ENST00000243706.8@HAUS3	ENST00000243706.8	protein_coding	2242051,2240038,2238604,2236228,2228349	2242133,2241093,2239043,2236456,2232160	Gene ID= ENSG00000214367.7 TPM= 3.5 Transcript Type= protein_coding
chr4	2231841	2242125	2231841	2242125	-	transcript432.chr4.nic@HAUS3	transcript432.chr4.nic	protein_coding	2240038,2238604,2236228,2231841	2242125,2239043,2236456,2232160	Gene ID= ENSG00000214367.7 TPM= 2.34 Transcript Type= NA
chr4	2247432	2262173	2247432	2262173	-	transcript439.chr4.nnic@MXD4	transcript439.chr4.nnic	protein_coding	2261917,2261725,2257982,2252408,2251084,2248197,2247432	2262173,2261824,2258011,2252522,2251246,2250701,2248116	Gene ID= ENSG00000123933.16 TPM= 22.57 Transcript Type= NA
chr4	2247432	2262294	2247432	2262294	-	ENST00000337190.6@MXD4	ENST00000337190.6	protein_coding	2261917,2261725,2257982,2252408,2251084,2247432	2262294,2261824,2258011,2252522,2251246,2250701	Gene ID= ENSG00000123933.16 TPM= 163.26 Transcript Type= protein_coding
chr4	2269598	2418663	2269598	2418663	-	ENST00000290974.6@ZFYVE28	ENST00000290974.6	protein_coding	2418285,2353933,2341478,2339453,2337407,2335705,2320170,2304289,2274062,2273173,2271675,2271311,2269598	2418663,2354073,2341615,2339655,2337496,2335794,2320271,2305536,2274216,2273289,2271779,2271414,2270856	Gene ID= ENSG00000159733.13 TPM= 21.02 Transcript Type= protein_coding
chr4	2468937	2515855	2468937	2515855	+	ENST00000314289.12@RNF4	ENST00000314289.12	protein_coding	2468937,2490337,2497007,2500659,2511956,2512438,2513083,2513670	2469258,2490502,2497121,2500738,2511965,2512597,2513131,2515855	Gene ID= ENSG00000063978.15 TPM= 66.55 Transcript Type= protein_coding
chr4	2469107	2515855	2469107	2515855	+	transcript483.chr4.nic@RNF4	transcript483.chr4.nic	protein_coding	2469107,2497007,2500659,2511956,2512438,2513083,2513670	2469258,2497121,2500738,2511965,2512597,2513131,2515855	Gene ID= ENSG00000063978.15 TPM= 7.01 Transcript Type= NA
chr4	2524608	2577115	2524608	2577115	-	transcript486.chr4.nnic@NA	transcript486.chr4.nnic	NA	2573475,2548181,2524608	2577115,2548484,2524704	Gene ID= novel_gene_chr4_487 TPM= 2.34 Transcript Type= NA
chr4	2741660	2756347	2741660	2756347	-	transcript494.chr4.nic@TNIP2	transcript494.chr4.nic	protein_coding	2756014,2747655,2745446,2744387,2741660	2756347,2747945,2745535,2744945,2742520	Gene ID= ENSG00000168884.14 TPM= 16.58 Transcript Type= NA
chr4	2741660	2756376	2741660	2756376	-	ENST00000315423.11@TNIP2	ENST00000315423.11	protein_coding	2756014,2747655,2745446,2744697,2744387,2741660	2756376,2747945,2745535,2744945,2744506,2742520	Gene ID= ENSG00000168884.14 TPM= 191.92 Transcript Type= protein_coding
chr4	2741648	2756331	2741648	2756331	-	ENST00000510267.5@TNIP2	ENST00000510267.5	protein_coding	2755949,2747655,2745446,2744697,2744387,2741648	2756331,2747945,2745535,2744945,2744506,2742520	Gene ID= ENSG00000168884.14 TPM= 6.27 Transcript Type= protein_coding
chr4	2741698	2756342	2741698	2756342	-	ENST00000503235.1@TNIP2	ENST00000503235.1	protein_coding	2756014,2747655,2745446,2744387,2741698	2756342,2747945,2745535,2744506,2742520	Gene ID= ENSG00000168884.14 TPM= 2.34 Transcript Type= protein_coding
chr4	2793023	2834293	2793023	2834293	+	ENST00000452765.6@SH3BP2	ENST00000452765.6	protein_coding	2793023,2820614,2822935,2824613,2825126,2827230,2827606,2829493,2831571,2831923,2832331,2832990,2833697	2793138,2820753,2823037,2824730,2825196,2827318,2827674,2830147,2831679,2831978,2832412,2833049,2834293	Gene ID= ENSG00000087266.15 TPM= 10.78 Transcript Type= protein_coding
chr4	2812219	2841096	2812219	2841096	+	ENST00000442312.6@SH3BP2	ENST00000442312.6	protein_coding	2812219,2820614,2822935,2824613,2825126,2827230,2827606,2829493,2831571,2831923,2832331,2832990,2833697	2812477,2820753,2823037,2824730,2825196,2827318,2827674,2830147,2831679,2831978,2832412,2833049,2841096	Gene ID= ENSG00000087266.15 TPM= 7.47 Transcript Type= protein_coding
chr4	2818185	2834289	2818185	2834289	+	ENST00000511747.5@SH3BP2	ENST00000511747.5	protein_coding	2818185,2820614,2822935,2824613,2825126,2827230,2827606,2829493,2831571,2831923,2832331,2832990,2833697	2818390,2820753,2823037,2824730,2825196,2827318,2827674,2830147,2831679,2831978,2832412,2833049,2834289	Gene ID= ENSG00000087266.15 TPM= 11.36 Transcript Type= protein_coding
chr4	2818185	2841096	2818185	2841096	+	ENST00000503393.6@SH3BP2	ENST00000503393.6	protein_coding	2818185,2820614,2822935,2824613,2825126,2827230,2827606,2829493,2831571,2831923,2832331,2832990,2833697	2818390,2820753,2823037,2824730,2825196,2827318,2827674,2830147,2831679,2831978,2832412,2833049,2841096	Gene ID= ENSG00000087266.15 TPM= 7.47 Transcript Type= protein_coding
chr4	2812304	2834288	2812304	2834288	+	ENST00000435136.6@SH3BP2	ENST00000435136.6	protein_coding	2812304,2820614,2822935,2824613,2825126,2827230,2827606,2829493,2831571,2831923,2832331,2832990,2833697	2812477,2820753,2823037,2824730,2825196,2827318,2827674,2830147,2831679,2831978,2832412,2833049,2834288	Gene ID= ENSG00000087266.15 TPM= 8.44 Transcript Type= protein_coding
chr4	2843825	2930073	2843825	2930073	+	transcript520.chr4.nic@ADD1	transcript520.chr4.nic	protein_coding	2843825,2875896,2881898,2884515,2894013,2894582,2898184,2898433,2899259,2904764,2907743,2908515,2909339,2914884,2926014,2928171	2844024,2876110,2882060,2884666,2894093,2894731,2898327,2898531,2899435,2905015,2907844,2908604,2909431,2915040,2926112,2930073	Gene ID= ENSG00000087274.16 TPM= 35.49 Transcript Type= NA
chr4	2843919	2930062	2843919	2930062	+	transcript521.chr4.nic@ADD1	transcript521.chr4.nic	protein_coding	2843919,2875896,2881898,2884515,2894013,2894582,2898184,2898433,2899259,2904764,2907743,2908515,2914884,2926014,2926642,2928171	2844024,2876110,2882060,2884666,2894093,2894731,2898327,2898531,2899435,2905015,2907844,2908604,2915040,2926112,2926675,2930062	Gene ID= ENSG00000087274.16 TPM= 25.28 Transcript Type= NA
chr4	2843825	2930073	2843825	2930073	+	transcript522.chr4.nic@ADD1	transcript522.chr4.nic	protein_coding	2843825,2875896,2881898,2884515,2894013,2894582,2898184,2898433,2899259,2904764,2907743,2908515,2914884,2926014,2928171	2844024,2876110,2882060,2884666,2894093,2894731,2898327,2898531,2899435,2905015,2907844,2908604,2915040,2926112,2930073	Gene ID= ENSG00000087274.16 TPM= 150.7 Transcript Type= NA
chr4	2843825	2930073	2843825	2930073	+	transcript527.chr4.nnic@ADD1	transcript527.chr4.nnic	protein_coding	2843825,2875896,2881898,2884515,2894013,2894582,2898184,2899259,2904764,2907743,2908515,2914884,2926014,2928171	2844024,2876110,2882060,2884666,2894093,2894731,2898327,2899435,2905015,2907844,2908604,2915040,2926112,2930073	Gene ID= ENSG00000087274.16 TPM= 37.15 Transcript Type= NA
chr4	2843857	2930073	2843857	2930073	+	ENST00000264758.11@ADD1	ENST00000264758.11	protein_coding	2843857,2875896,2881898,2884515,2894013,2894582,2898184,2898433,2899259,2904764,2907743,2908515,2914884,2926014,2928171	2844024,2876110,2882060,2884666,2894093,2894731,2898327,2898531,2899435,2905108,2907844,2908604,2915040,2926112,2930073	Gene ID= ENSG00000087274.16 TPM= 37.44 Transcript Type= protein_coding
chr4	2863221	2865675	2863221	2865675	-	transcript565.chr4.nnic@NA	transcript565.chr4.nnic	NA	2863221	2865675	Gene ID= novel_gene_chr4_566 TPM= 5.84 Transcript Type= NA
chr4	2930561	2934881	2930561	2934881	-	transcript539.chr4.nic@MFSD10	transcript539.chr4.nic	protein_coding	2934769,2933753,2933567,2933106,2932600,2932351,2932045,2931825,2931555,2931375,2931227,2930561	2934881,2933944,2933663,2933209,2932758,2932512,2932153,2931936,2931663,2931465,2931274,2931150	Gene ID= ENSG00000109736.14 TPM= 20.56 Transcript Type= NA
chr4	2930568	2934814	2930568	2934814	-	transcript542.chr4.nic@MFSD10	transcript542.chr4.nic	protein_coding	2934769,2933753,2933567,2932600,2932351,2932045,2931825,2931555,2931375,2931227,2931061,2930568	2934814,2933944,2933663,2933209,2932512,2932153,2931936,2931663,2931465,2931274,2931150,2930953	Gene ID= ENSG00000109736.14 TPM= 11.38 Transcript Type= NA
chr4	2930565	2934859	2930565	2934859	-	ENST00000355443.8@MFSD10	ENST00000355443.8	protein_coding	2934769,2933753,2933567,2933106,2932600,2932351,2932045,2931825,2931555,2931375,2931227,2931061,2930565	2934859,2933944,2933663,2933209,2932758,2932512,2932153,2931936,2931663,2931465,2931274,2931150,2930953	Gene ID= ENSG00000109736.14 TPM= 200.46 Transcript Type= protein_coding
chr4	2930611	2934834	2930611	2934834	-	ENST00000507555.1@MFSD10	ENST00000507555.1	protein_coding	2934769,2933753,2933567,2933106,2932600,2932351,2932045,2931825,2931375,2931227,2931061,2930611	2934834,2933944,2933663,2933209,2932758,2932512,2932153,2931936,2931465,2931274,2931150,2930953	Gene ID= ENSG00000109736.14 TPM= 6.13 Transcript Type= protein_coding
chr4	2930561	2933947	2930561	2933947	-	ENST00000514800.5@MFSD10	ENST00000514800.5	protein_coding	2933753,2933567,2933106,2932600,2932351,2932045,2931825,2931555,2931375,2931227,2930561	2933947,2933663,2933209,2932758,2932512,2932153,2931936,2931663,2931465,2931274,2931150	Gene ID= ENSG00000109736.14 TPM= 10.64 Transcript Type= protein_coding
chr4	2930566	2931917	2930566	2931917	-	transcript567.chr4.nnic@NA	transcript567.chr4.nnic	NA	2930566	2931917	Gene ID= novel_gene_chr4_568 TPM= 3.14 Transcript Type= NA
chr4	2934940	2940504	2934940	2940504	+	ENST00000507999.5@NOP14-AS1	ENST00000507999.5	antisense_RNA	2934940,2937752,2937975,2938693,2940302	2935735,2937844,2938142,2938792,2940504	Gene ID= ENSG00000249673.6 TPM= 1.17 Transcript Type= antisense_RNA
chr4	2934907	2937995	2934907	2937995	+	transcript585.chr4.nnic@NA	transcript585.chr4.nnic	NA	2934907	2937995	Gene ID= novel_gene_chr4_586 TPM= 4.67 Transcript Type= NA
chr4	2937933	2963385	2937933	2963385	-	ENST00000416614.6@NOP14	ENST00000416614.6	protein_coding	2963125,2957606,2956670,2954424,2953511,2952275,2951114,2949934,2948278,2947526,2946412,2945128,2944073,2942192,2941582,2939527,2939188,2937933	2963385,2957740,2956811,2954563,2953645,2952397,2951245,2950213,2948408,2947611,2946547,2945229,2944226,2942351,2941729,2939645,2939343,2938930	Gene ID= ENSG00000087269.15 TPM= 7.01 Transcript Type= protein_coding
chr4	2963585	2967220	2963585	2967220	+	transcript589.chr4.nnic@NA	transcript589.chr4.nnic	NA	2963585	2967220	Gene ID= novel_gene_chr4_590 TPM= 2.34 Transcript Type= NA
chr4	2963634	2966889	2963634	2966889	+	ENST00000503518.2@GRK4	ENST00000503518.2	protein_coding	2963634,2965243	2964122,2966889	Gene ID= ENSG00000125388.19 TPM= 1.17 Transcript Type= protein_coding
chr4	3074681	3243959	3074681	3243959	+	ENST00000355072.9@HTT	ENST00000355072.9	protein_coding	3074681,3086939,3099274,3103824,3105357,3107285,3115304,3116085,3121228,3122889,3125549,3127264,3129924,3130305,3131286,3131638,3132562,3132814,3134401,3135904,3136226,3140510,3142766,3145152,3146797,3148005,3154293,3157072,3160282,3172320,3172908,3174721,3174946,3177332,3178298,3180515,3182354,3186597,3187651,3188951,3199732,3204007,3206496,3206807,3207281,3208773,3209827,3211929,3212564,3213958,3215110,3217765,3220182,3222387,3223406,3223992,3225661,3228615,3228880,3229887,3233163,3235284,3235565,3236149,3238447,3238818,3239846	3075088,3087022,3099394,3103883,3105436,3107423,3115445,3116263,3121432,3122936,3125629,3127604,3130047,3130423,3131397,3131775,3132720,3132911,3134540,3135967,3136326,3140656,3142886,3145228,3146948,3148207,3154419,3157199,3160392,3172397,3173131,3174799,3175107,3177387,3178446,3180651,3182470,3186719,3187886,3189093,3199939,3204148,3206675,3206983,3207357,3208911,3209949,3212142,3212709,3214135,3215211,3217952,3220308,3222487,3223560,3224131,3225743,3228745,3229009,3230042,3233353,3235398,3235778,3236254,3238609,3238978,3243959	Gene ID= ENSG00000197386.10 TPM= 51.37 Transcript Type= protein_coding
chr4	3293012	3439905	3293012	3439905	+	transcript598.chr4.nnic@RGS12	transcript598.chr4.nnic	protein_coding	3293012,3316070,3342937,3386416,3414072,3414752,3415978,3416913,3417388,3420642,3422376,3422905,3423515,3425464,3428090,3430407,3439455	3293099,3318051,3343053,3386437,3414241,3414844,3416121,3417092,3417541,3420718,3422570,3422978,3423641,3425560,3428169,3430955,3439905	Gene ID= ENSG00000159788.18 TPM= 8.76 Transcript Type= NA
chr4	3386132	3432169	3386132	3432169	+	transcript601.chr4.nic@RGS12	transcript601.chr4.nic	protein_coding	3386132,3414072,3414752,3415978,3416913,3417388,3420642,3422376,3422905,3423515,3425464,3428090,3428558,3430407	3386437,3414241,3414844,3416121,3417092,3417541,3420718,3422570,3422978,3423641,3425560,3428169,3428711,3432169	Gene ID= ENSG00000159788.18 TPM= 21.4 Transcript Type= NA
chr4	3386081	3432169	3386081	3432169	+	transcript604.chr4.nic@RGS12	transcript604.chr4.nic	protein_coding	3386081,3414072,3414752,3415978,3416913,3417388,3420642,3422376,3422905,3423515,3425464,3428090,3430407	3386437,3414241,3414844,3416121,3417092,3417541,3420718,3422570,3422978,3423641,3425560,3428169,3432169	Gene ID= ENSG00000159788.18 TPM= 30.74 Transcript Type= NA
chr4	3293012	3419043	3293012	3419043	+	transcript608.chr4.nnic@RGS12	transcript608.chr4.nnic	protein_coding	3293012,3316070,3342937,3386416,3414072,3414752,3415978,3416913,3417388	3293099,3318051,3343053,3386437,3414241,3414844,3416121,3417092,3419043	Gene ID= ENSG00000159788.18 TPM= 5.25 Transcript Type= NA
chr4	3385706	3419043	3385706	3419043	+	transcript612.chr4.nic@RGS12	transcript612.chr4.nic	protein_coding	3385706,3414072,3414752,3415978,3416913,3417388	3386437,3414241,3414844,3416121,3417092,3419043	Gene ID= ENSG00000159788.18 TPM= 10.89 Transcript Type= NA
chr4	3375098	3379510	3375098	3379510	+	transcript615.chr4.nnic@NA	transcript615.chr4.nnic	NA	3375098	3379510	Gene ID= novel_gene_chr4_616 TPM= 2.34 Transcript Type= NA
chr4	3463311	3494483	3463311	3494483	+	ENST00000340083.5@DOK7	ENST00000340083.5	protein_coding	3463311,3463506,3473406,3476342,3485539,3489677,3492759	3463429,3463551,3473636,3476542,3485658,3489796,3494483	Gene ID= ENSG00000175920.16 TPM= 6.42 Transcript Type= protein_coding
chr4	3463311	3494483	3463311	3494483	+	ENST00000507039.5@DOK7	ENST00000507039.5	protein_coding	3463311,3463506,3473406,3476342,3485539,3489677,3492759	3463429,3463551,3473636,3476531,3485658,3489796,3494483	Gene ID= ENSG00000175920.16 TPM= 1.75 Transcript Type= protein_coding
chr4	3503597	3504457	3503597	3504457	-	ENST00000564650.1@AL590235.1	ENST00000564650.1	sense_overlapping	3503597	3504457	Gene ID= ENSG00000261643.1 TPM= 1.17 Transcript Type= sense_overlapping
chr4	3506376	3532559	3506376	3532559	-	ENST00000500728.2@LRPAP1	ENST00000500728.2	protein_coding	3532209,3524907,3520072,3518871,3518034,3516116,3514752,3506376	3532559,3525051,3520193,3518991,3518192,3516198,3514928,3513036	Gene ID= ENSG00000163956.10 TPM= 547.6 Transcript Type= protein_coding
chr4	3766398	3768526	3766398	3768526	+	ENST00000330055.6@ADRA2C	ENST00000330055.6	protein_coding	3766398	3768526	Gene ID= ENSG00000184160.7 TPM= 10.51 Transcript Type= protein_coding
chr4	4235540	4241422	4235540	4241422	-	transcript644.chr4.nnic@NA	transcript644.chr4.nnic	NA	4235540	4241422	Gene ID= novel_gene_chr4_645 TPM= 2.34 Transcript Type= NA
chr4	4235542	4248212	4235542	4248212	-	ENST00000254742.6@TMEM128	ENST00000254742.6	protein_coding	4247601,4246202,4240321,4237827,4235542	4248212,4246343,4240479,4237935,4236256	Gene ID= ENSG00000132406.11 TPM= 1.17 Transcript Type= protein_coding
chr4	4235542	4248232	4235542	4248232	-	transcript640.chr4.nnic@TMEM128	transcript640.chr4.nnic	protein_coding	4248106,4246202,4240321,4237827,4235542	4248232,4246343,4240479,4237935,4237077	Gene ID= ENSG00000132406.11 TPM= 7.01 Transcript Type= NA
chr4	4235553	4248212	4235553	4248212	-	ENST00000382753.4@TMEM128	ENST00000382753.4	protein_coding	4248106,4246202,4240321,4237827,4235553	4248212,4246343,4240479,4237935,4236256	Gene ID= ENSG00000132406.11 TPM= 22.18 Transcript Type= protein_coding
chr4	4267701	4290169	4267701	4290169	-	ENST00000343470.8@LYAR	ENST00000343470.8	protein_coding	4290036,4286519,4283621,4281783,4279642,4279447,4274367,4273583,4268530,4267701	4290169,4286572,4283795,4281897,4279749,4279530,4274769,4273669,4268615,4268023	Gene ID= ENSG00000145220.13 TPM= 15.18 Transcript Type= protein_coding
chr4	4290229	4321786	4290229	4321786	+	transcript651.chr4.nic@ZBTB49	transcript651.chr4.nic	protein_coding	4290229,4299927,4301989,4313041,4315636,4315809,4320640	4290352,4300097,4303091,4313114,4315718,4315970,4321786	Gene ID= ENSG00000168826.15 TPM= 2.92 Transcript Type= NA
chr4	4290251	4321786	4290251	4321786	+	ENST00000337872.8@ZBTB49	ENST00000337872.8	protein_coding	4290251,4299927,4301989,4306138,4313041,4315636,4315809,4320640	4290352,4300097,4303091,4306184,4313114,4315718,4315970,4321786	Gene ID= ENSG00000168826.15 TPM= 7.59 Transcript Type= protein_coding
chr4	4419474	4542063	4419474	4542063	-	transcript655.chr4.nnic@STX18	transcript655.chr4.nnic	protein_coding	4541797,4471639,4459372,4457402,4457191,4438394,4434770,4425164,4423518,4420864,4419474	4542063,4471706,4459487,4457500,4457257,4438509,4434858,4425222,4423587,4420944,4420129	Gene ID= ENSG00000168818.9 TPM= 2.34 Transcript Type= NA
chr4	4418968	4542028	4418968	4542028	-	ENST00000306200.6@STX18	ENST00000306200.6	protein_coding	4541797,4471639,4459372,4457423,4457191,4438394,4434770,4425164,4423518,4420864,4418968	4542028,4471706,4459487,4457500,4457257,4438509,4434858,4425222,4423587,4420944,4420129	Gene ID= ENSG00000168818.9 TPM= 7.01 Transcript Type= protein_coding
chr4	4859666	4863936	4859666	4863936	+	ENST00000382723.4@MSX1	ENST00000382723.4	protein_coding	4859666,4862701	4860368,4863936	Gene ID= ENSG00000163132.6 TPM= 2.34 Transcript Type= protein_coding
chr4	5014586	5019472	5014586	5019472	-	ENST00000307746.8@CYTL1	ENST00000307746.8	protein_coding	5019293,5017135,5016836,5014586	5019472,5017179,5016964,5015234	Gene ID= ENSG00000170891.10 TPM= 1.17 Transcript Type= protein_coding
chr4	5562439	5708567	5562439	5708567	-	ENST00000344408.9@EVC2	ENST00000344408.9	protein_coding	5708286,5697593,5694335,5691265,5689157,5685370,5681260,5665515,5663107,5640514,5631793,5628559,5625749,5622537,5618478,5615422,5584623,5576240,5574685,5568444,5565258,5562439	5708567,5697647,5694501,5691333,5689343,5685479,5681313,5665649,5663246,5640838,5632032,5628734,5625908,5622991,5618682,5615544,5584850,5576454,5574772,5568640,5565359,5563115	Gene ID= ENSG00000173040.12 TPM= 10.51 Transcript Type= protein_coding
chr4	5812167	5829012	5812167	5829012	+	transcript680.chr4.nnic@EVC	transcript680.chr4.nnic	protein_coding	5812167,5823692,5828519	5814162,5823820,5829012	Gene ID= ENSG00000072840.12 TPM= 3.5 Transcript Type= NA
chr4	5711197	5814305	5711197	5814305	+	ENST00000264956.10@EVC	ENST00000264956.10	protein_coding	5711197,5719248,5729307,5731425,5733351,5741716,5745204,5748148,5752836,5753785,5756264,5783552,5793608,5797022,5798586,5801950,5804730,5808201,5809518,5810339,5810953	5711554,5719373,5729390,5731657,5733435,5741814,5745341,5748306,5753052,5753933,5756362,5783764,5793717,5797232,5798792,5802094,5804841,5808327,5809611,5810450,5814305	Gene ID= ENSG00000072840.12 TPM= 18.68 Transcript Type= protein_coding
chr4	5820783	5888481	5820783	5888481	-	ENST00000397890.6@CRMP1	ENST00000397890.6	protein_coding	5888228,5866668,5861026,5856143,5851408,5849392,5843093,5841308,5839522,5836765,5835915,5828489,5825494,5820783	5888481,5866756,5861210,5856307,5851469,5849472,5843161,5841428,5839678,5836906,5836085,5828668,5825659,5821851	Gene ID= ENSG00000072832.14 TPM= 32.69 Transcript Type= protein_coding
chr4	6269850	6303265	6269850	6303265	+	ENST00000226760.5@WFS1	ENST00000226760.5	protein_coding	6269850,6277451,6287093,6288987,6291197,6291917,6295041,6300657	6270014,6277687,6287175,6289131,6291367,6291997,6295189,6303265	Gene ID= ENSG00000109501.13 TPM= 339.77 Transcript Type= protein_coding
chr4	6303163	6306543	6303163	6306543	+	transcript695.chr4.nnic@NA	transcript695.chr4.nnic	NA	6303163	6306543	Gene ID= novel_gene_chr4_696 TPM= 2.34 Transcript Type= NA
chr4	6617849	6619250	6617849	6619250	-	transcript701.chr4.nnic@NA	transcript701.chr4.nnic	NA	6617849	6619250	Gene ID= novel_gene_chr4_702 TPM= 10.51 Transcript Type= NA
chr4	6640091	6642729	6640091	6642729	+	ENST00000320912.8@MRFAP1	ENST00000320912.8	protein_coding	6640091,6640828,6641730	6640708,6641258,6642729	Gene ID= ENSG00000179010.14 TPM= 55.46 Transcript Type= protein_coding
chr4	6640727	6642730	6640727	6642730	+	transcript705.chr4.nnic@MRFAP1	transcript705.chr4.nnic	protein_coding	6640727,6641730	6641610,6642730	Gene ID= ENSG00000179010.14 TPM= 4.67 Transcript Type= NA
chr4	6640691	6642745	6640691	6642745	+	ENST00000382581.4@MRFAP1	ENST00000382581.4	protein_coding	6640691,6641730	6641258,6642745	Gene ID= ENSG00000179010.14 TPM= 164.05 Transcript Type= protein_coding
chr4	6640687	6643858	6640687	6643858	-	transcript706.chr4.nnic@NA	transcript706.chr4.nnic	NA	6640687	6643858	Gene ID= novel_gene_chr4_707 TPM= 3.5 Transcript Type= NA
chr4	6670725	6673830	6670725	6673830	-	ENST00000515205.1@LINC02482	ENST00000515205.1	lincRNA	6673684,6670725	6673830,6670999	Gene ID= ENSG00000251580.1 TPM= 1.17 Transcript Type= lincRNA
chr4	6673451	6676047	6673451	6676047	+	ENST00000307533.10@AC093323.1	ENST00000307533.10	lincRNA	6673451,6674993	6674706,6676047	Gene ID= ENSG00000170846.16 TPM= 12.84 Transcript Type= lincRNA
chr4	6673969	6676013	6673969	6676013	+	ENST00000635031.1@AC093323.1	ENST00000635031.1	lincRNA	6673969	6676013	Gene ID= ENSG00000170846.16 TPM= 15.18 Transcript Type= lincRNA
chr4	6674088	6676047	6674088	6676047	+	ENST00000444232.3@AC093323.1	ENST00000444232.3	lincRNA	6674088,6674993	6674637,6676047	Gene ID= ENSG00000170846.16 TPM= 1.17 Transcript Type= lincRNA
chr4	6693069	6697169	6693069	6697169	+	ENST00000296370.3@S100P	ENST00000296370.3	protein_coding	6693069,6696893	6694070,6697169	Gene ID= ENSG00000163993.6 TPM= 4.67 Transcript Type= protein_coding
chr4	6707701	6709827	6707701	6709827	-	ENST00000500563.2@MRFAP1L1	ENST00000500563.2	protein_coding	6707701	6709827	Gene ID= ENSG00000178988.10 TPM= 10.51 Transcript Type= retained_intron
chr4	6707701	6709880	6707701	6709880	-	ENST00000320848.6@MRFAP1L1	ENST00000320848.6	protein_coding	6709231,6707701	6709880,6708643	Gene ID= ENSG00000178988.10 TPM= 59.55 Transcript Type= protein_coding
chr4	6716055	6717671	6716055	6717671	+	ENST00000320776.4@BLOC1S4	ENST00000320776.4	protein_coding	6716055	6717671	Gene ID= ENSG00000186222.4 TPM= 4.67 Transcript Type= protein_coding
chr4	6782715	6864759	6782715	6864759	+	transcript723.chr4.nic@KIAA0232	transcript723.chr4.nic	protein_coding	6782715,6824185,6842067,6857164,6858425,6860901	6782841,6824684,6842204,6857230,6858506,6864759	Gene ID= ENSG00000170871.11 TPM= 3.5 Transcript Type= NA
chr4	6909444	7033118	6909444	7033118	+	ENST00000448507.5@TBC1D14	ENST00000448507.5	protein_coding	6909444,6923373,6967304,6994184,6996325,6999085,7001145,7004844,7006632,7009877,7010653,7014448,7025004,7030327	6909505,6924111,6967424,6994302,6996407,6999202,7001251,7004924,7006726,7009948,7010781,7014557,7025262,7033118	Gene ID= ENSG00000132405.18 TPM= 13.01 Transcript Type= protein_coding
chr4	6909771	7033111	6909771	7033111	+	transcript727.chr4.nnic@TBC1D14	transcript727.chr4.nnic	protein_coding	6909771,6923373,6967304,6994194,6996325,6999085,7001145,7004844,7006632,7009877,7010653,7014448,7025004,7030327	6909951,6924111,6967424,6994302,6996407,6999202,7001251,7004924,7006726,7009948,7010781,7014557,7025262,7033111	Gene ID= ENSG00000132405.18 TPM= 6.4 Transcript Type= NA
chr4	6909771	7033111	6909771	7033111	+	transcript730.chr4.nnic@TBC1D14	transcript730.chr4.nnic	protein_coding	6909771,6923373,6967304,6994184,6996325,6999085,7001145,7004844,7006632,7010653,7014448,7025004,7030327	6909951,6924111,6967424,6994302,6996407,6999202,7001251,7004924,7006726,7010781,7014557,7025262,7033111	Gene ID= ENSG00000132405.18 TPM= 11.07 Transcript Type= NA
chr4	6909771	7033111	6909771	7033111	+	transcript733.chr4.nnic@TBC1D14	transcript733.chr4.nnic	protein_coding	6909771,6923373,6967304,6994184,6996325,6999085,7001145,7004844,7010653,7014448,7025004,7030327	6909951,6924111,6967424,6994302,6996407,6999202,7001251,7004924,7010781,7014557,7025262,7033111	Gene ID= ENSG00000132405.18 TPM= 7.57 Transcript Type= NA
chr4	6987211	7033111	6987211	7033111	+	transcript737.chr4.nnic@TBC1D14	transcript737.chr4.nnic	protein_coding	6987211,6994184,6996325,6999085,7001145,7004844,7006632,7010653,7014448,7025004,7030327	6987349,6994302,6996407,6999202,7001251,7004924,7006726,7010781,7014557,7025262,7033111	Gene ID= ENSG00000132405.18 TPM= 6 Transcript Type= NA
chr4	6909845	7033111	6909845	7033111	+	ENST00000409757.8@TBC1D14	ENST00000409757.8	protein_coding	6909845,6923373,6967304,6994184,6996325,6999085,7001145,7004844,7006632,7009877,7010653,7014448,7025004,7030327	6909951,6924111,6967424,6994302,6996407,6999202,7001251,7004924,7006726,7009948,7010781,7014557,7025262,7033111	Gene ID= ENSG00000132405.18 TPM= 27.6 Transcript Type= protein_coding
chr4	6987162	7033114	6987162	7033114	+	ENST00000451522.6@TBC1D14	ENST00000451522.6	protein_coding	6987162,6994184,6996325,6999085,7001145,7004844,7006632,7009877,7010653,7014448,7025004,7030327	6987349,6994302,6996407,6999202,7001251,7004924,7006726,7009948,7010781,7014557,7025262,7033114	Gene ID= ENSG00000132405.18 TPM= 21.76 Transcript Type= protein_coding
chr4	6985921	6987042	6985921	6987042	-	transcript742.chr4.nnic@NA	transcript742.chr4.nnic	NA	6985921	6987042	Gene ID= novel_gene_chr4_743 TPM= 8.17 Transcript Type= NA
chr4	7040849	7042939	7040849	7042939	-	ENST00000310085.5@CCDC96	ENST00000310085.5	protein_coding	7040849	7042939	Gene ID= ENSG00000173013.5 TPM= 1.17 Transcript Type= protein_coding
chr4	7043391	7057952	7043391	7057952	+	ENST00000310074.7@TADA2B	ENST00000310074.7	protein_coding	7043391,7054062	7043849,7057952	Gene ID= ENSG00000173011.11 TPM= 67.72 Transcript Type= protein_coding
chr4	7058906	7068197	7058906	7068197	-	ENST00000264954.4@GRPEL1	ENST00000264954.4	protein_coding	7067971,7064061,7062385,7058906	7068197,7064223,7062466,7061208	Gene ID= ENSG00000109519.12 TPM= 10.51 Transcript Type= protein_coding
chr4	7192538	7742827	7192538	7742827	+	ENST00000507866.6@SORCS2	ENST00000507866.6	protein_coding	7192538,7396288,7531530,7638328,7654134,7661500,7664353,7667124,7676050,7682743,7689486,7697198,7703280,7704177,7712733,7714240,7715183,7718012,7723697,7725154,7726780,7728350,7729587,7733322,7734272,7737069,7740200	7193126,7396355,7531629,7638492,7654207,7661564,7664471,7667213,7676229,7682889,7689588,7697274,7703371,7704284,7712853,7714373,7715311,7718183,7723883,7725287,7726903,7728462,7729712,7733421,7734374,7737172,7742827	Gene ID= ENSG00000184985.16 TPM= 7.01 Transcript Type= protein_coding
chr4	7758715	7939926	7758715	7939926	-	ENST00000358461.6@AFAP1	ENST00000358461.6	protein_coding	7939656,7871952,7868622,7855466,7843139,7838524,7819076,7816018,7809614,7800442,7793681,7786194,7778762,7774739,7772820,7768844,7758715	7939926,7872080,7868719,7855574,7843350,7838703,7819171,7816099,7809763,7800653,7793826,7786311,7778876,7774903,7773010,7769008,7763791	Gene ID= ENSG00000196526.10 TPM= 18.68 Transcript Type= protein_coding
chr4	8199275	8241091	8199275	8241091	+	transcript794.chr4.nic@SH3TC1	transcript794.chr4.nic	protein_coding	8199275,8205167,8209665,8212701,8214475,8216111,8218271,8219335,8222840,8225175,8226980,8231976,8233363,8235433,8236278,8237474,8240698	8199405,8205366,8209822,8212828,8214580,8216257,8218347,8219530,8222970,8225216,8228644,8232156,8233513,8235555,8236428,8237670,8241091	Gene ID= ENSG00000125089.16 TPM= 7.59 Transcript Type= NA
chr4	8199283	8241091	8199283	8241091	+	transcript800.chr4.nic@SH3TC1	transcript800.chr4.nic	protein_coding	8199283,8205167,8209748,8212701,8214475,8216111,8218271,8219335,8222840,8225175,8226980,8231976,8233363,8235433,8236278,8237474,8240698	8199405,8205366,8209822,8212828,8214580,8216257,8218347,8219530,8222970,8225216,8228644,8232156,8233513,8235555,8236428,8237670,8241091	Gene ID= ENSG00000125089.16 TPM= 6.42 Transcript Type= NA
chr4	8199367	8241103	8199367	8241103	+	ENST00000245105.7@SH3TC1	ENST00000245105.7	protein_coding	8199367,8205167,8209748,8212701,8214475,8216111,8216957,8218271,8219335,8222840,8225175,8226980,8231976,8233363,8235433,8236278,8237474,8240698	8199405,8205366,8209822,8212828,8214580,8216257,8217167,8218347,8219530,8222970,8225216,8228644,8232156,8233513,8235555,8236428,8237670,8241103	Gene ID= ENSG00000125089.16 TPM= 24.52 Transcript Type= protein_coding
chr4	8199371	8241091	8199371	8241091	+	ENST00000515682.5@SH3TC1	ENST00000515682.5	protein_coding	8199371,8205167,8209665,8212701,8214475,8216111,8216957,8218271,8219335,8222840,8225175,8226980,8231976,8233363,8235433,8236278,8237474,8240698	8199405,8205366,8209822,8212828,8214580,8216257,8217167,8218347,8219530,8222970,8225216,8228644,8232156,8233513,8235555,8236428,8237670,8241091	Gene ID= ENSG00000125089.16 TPM= 8.17 Transcript Type= nonsense_mediated_decay
chr4	8223633	8226441	8223633	8226441	-	transcript805.chr4.nnic@NA	transcript805.chr4.nnic	NA	8223633	8226441	Gene ID= novel_gene_chr4_806 TPM= 2.34 Transcript Type= NA
chr4	8269765	8307111	8269765	8307111	+	ENST00000307358.6@HTRA3	ENST00000307358.6	protein_coding	8269765,8282437,8286561,8291370,8292321,8294087,8302463,8304184,8305971	8270353,8282536,8286783,8291564,8292353,8294201,8302511,8304279,8307111	Gene ID= ENSG00000170801.9 TPM= 116.76 Transcript Type= protein_coding
chr4	8269777	8296474	8269777	8296474	+	ENST00000382512.3@HTRA3	ENST00000382512.3	protein_coding	8269777,8282437,8286561,8291370,8292321,8294087,8295695	8270353,8282536,8286783,8291564,8292353,8294201,8296474	Gene ID= ENSG00000170801.9 TPM= 12.84 Transcript Type= protein_coding
chr4	8357150	8360538	8357150	8360538	+	transcript811.chr4.nnic@NA	transcript811.chr4.nnic	NA	8357150	8360538	Gene ID= novel_gene_chr4_812 TPM= 2.34 Transcript Type= NA
chr4	8366363	8428490	8366363	8428490	-	transcript820.chr4.nic@ACOX3	transcript820.chr4.nic	protein_coding	8428351,8416378,8415766,8414854,8414292,8410212,8405955,8399556,8396937,8394620,8392333,8389612,8389173,8381492,8374978,8370908,8366363	8428490,8416535,8415999,8414928,8414381,8410355,8406043,8399652,8397119,8394742,8392453,8389734,8389286,8381607,8375152,8370994,8367080	Gene ID= ENSG00000087008.15 TPM= 3.5 Transcript Type= NA
chr4	8440776	8476583	8440776	8476583	+	transcript829.chr4.nnic@TRMT44	transcript829.chr4.nnic	protein_coding	8440776,8446476,8449669,8451960,8452882,8454742,8463985,8465378,8467914,8471084,8475530	8441441,8446590,8449888,8452028,8452989,8454813,8464091,8465561,8468346,8471200,8476583	Gene ID= ENSG00000155275.18 TPM= 2.34 Transcript Type= NA
chr4	8440776	8476554	8440776	8476554	+	transcript831.chr4.nic@TRMT44	transcript831.chr4.nic	protein_coding	8440776,8446476,8449698,8451960,8452882,8454742,8463985,8465378,8467914,8471084,8475772	8441441,8446590,8449888,8452028,8452989,8454813,8464091,8465561,8468346,8471200,8476554	Gene ID= ENSG00000155275.18 TPM= 3.5 Transcript Type= NA
chr4	8440823	8476526	8440823	8476526	+	ENST00000389737.4@TRMT44	ENST00000389737.4	protein_coding	8440823,8446476,8449669,8451960,8452882,8454742,8463985,8465378,8467914,8471084,8475772	8441441,8446590,8449888,8452028,8452989,8454813,8464091,8465561,8468346,8471200,8476526	Gene ID= ENSG00000155275.18 TPM= 7.01 Transcript Type= protein_coding
chr4	8449951	8451052	8449951	8451052	-	transcript836.chr4.nnic@NA	transcript836.chr4.nnic	NA	8449951	8451052	Gene ID= novel_gene_chr4_837 TPM= 2.34 Transcript Type= NA
chr4	8592660	8619751	8592660	8619751	+	ENST00000360986.8@CPZ	ENST00000360986.8	protein_coding	8592660,8599453,8601123,8603976,8605989,8606737,8607267,8612027,8614359,8618429,8619262	8592921,8599485,8601497,8604188,8606185,8606898,8607425,8612162,8614498,8618528,8619751	Gene ID= ENSG00000109625.18 TPM= 2.92 Transcript Type= protein_coding
chr4	8592756	8619749	8592756	8619749	+	ENST00000315782.6@CPZ	ENST00000315782.6	protein_coding	8592756,8601123,8603976,8605989,8606737,8607267,8612027,8614359,8618429,8619262	8592921,8601497,8604188,8606185,8606898,8607425,8612162,8614498,8618528,8619749	Gene ID= ENSG00000109625.18 TPM= 2.92 Transcript Type= protein_coding
chr4	9778833	10021526	9778833	10021526	-	transcript850.chr4.nic@SLC2A9	transcript850.chr4.nic	protein_coding	10021280,10018975,9985669,9980592,9941913,9920385,9908235,9890610,9887567,9834881,9826420,9778833	10021526,10019073,9985793,9980737,9942045,9920572,9908345,9890711,9887642,9835008,9826600,9780065	Gene ID= ENSG00000109667.11 TPM= 2.34 Transcript Type= NA
chr4	9826224	10021526	9826224	10021526	-	transcript857.chr4.nic@SLC2A9	transcript857.chr4.nic	protein_coding	10021280,10018975,9985669,9980592,9941913,9920385,9908235,9890610,9887567,9834881,9826224	10021526,10019073,9985793,9980737,9942045,9920572,9908345,9890711,9887642,9835008,9826600	Gene ID= ENSG00000109667.11 TPM= 5.25 Transcript Type= NA
chr4	9826224	10021483	9826224	10021483	-	ENST00000264784.7@SLC2A9	ENST00000264784.7	protein_coding	10021280,10018975,9996781,9985669,9980592,9941913,9920385,9908235,9890610,9887567,9834881,9826224	10021483,10019073,9996941,9985793,9980737,9942045,9920572,9908345,9890711,9887642,9835008,9826600	Gene ID= ENSG00000109667.11 TPM= 6.42 Transcript Type= protein_coding
chr4	10008902	10010795	10008902	10010795	-	transcript862.chr4.nnic@NA	transcript862.chr4.nnic	NA	10008902	10010795	Gene ID= novel_gene_chr4_863 TPM= 7.01 Transcript Type= NA
chr4	10068089	10073019	10068089	10073019	-	ENST00000561486.1@AC005674.2	ENST00000561486.1	sense_overlapping	10071246,10068089	10073019,10069824	Gene ID= ENSG00000261490.1 TPM= 1.17 Transcript Type= sense_overlapping
chr4	10074474	10116554	10074474	10116554	-	transcript869.chr4.nic@WDR1	transcript869.chr4.nic	protein_coding	10116331,10116113,10103896,10098992,10097711,10088664,10088293,10087707,10084443,10083022,10081357,10078891,10077753,10077304,10074474	10116554,10116234,10103986,10099139,10097891,10088741,10088373,10087940,10084530,10083178,10081444,10079001,10077926,10077448,10075484	Gene ID= ENSG00000071127.16 TPM= 19.27 Transcript Type= NA
chr4	10074340	10116949	10074340	10116949	-	ENST00000382452.6@WDR1	ENST00000382452.6	protein_coding	10116651,10116113,10103896,10098992,10097711,10088664,10088293,10087707,10084441,10083022,10081357,10078891,10077753,10077304,10074340	10116949,10116234,10103986,10099139,10097891,10088741,10088373,10087940,10084530,10083176,10081444,10079001,10077926,10077448,10075484	Gene ID= ENSG00000071127.16 TPM= 37.95 Transcript Type= protein_coding
chr4	10093350	10097934	10093350	10097934	+	transcript884.chr4.nnic@NA	transcript884.chr4.nnic	NA	10093350	10097934	Gene ID= novel_gene_chr4_885 TPM= 3.5 Transcript Type= NA
chr4	10442716	10457425	10442716	10457425	-	transcript890.chr4.nnic@ZNF518B	transcript890.chr4.nnic	protein_coding	10457317,10454594,10442716	10457425,10454988,10446539	Gene ID= ENSG00000178163.7 TPM= 3.5 Transcript Type= NA
chr4	10439874	10457360	10439874	10457360	-	ENST00000326756.3@ZNF518B	ENST00000326756.3	protein_coding	10457317,10454805,10439874	10457360,10454988,10446539	Gene ID= ENSG00000178163.7 TPM= 5.84 Transcript Type= protein_coding
chr4	10450887	10457410	10450887	10457410	-	ENST00000503068.1@ZNF518B	ENST00000503068.1	protein_coding	10457317,10450887	10457410,10454988	Gene ID= ENSG00000178163.7 TPM= 1.17 Transcript Type= retained_intron
chr4	11393150	11429765	11393150	11429765	-	ENST00000002596.5@HS3ST1	ENST00000002596.5	protein_coding	11428699,11393150	11429765,11400113	Gene ID= ENSG00000002587.9 TPM= 2.34 Transcript Type= protein_coding
chr4	13367724	13484365	13367724	13484365	-	ENST00000288723.8@RAB28	ENST00000288723.8	protein_coding	13484076,13479430,13474318,13460699,13381491,13376545,13369871,13367724	13484365,13479526,13474406,13460828,13381594,13376622,13369965,13368650	Gene ID= ENSG00000157869.14 TPM= 9.73 Transcript Type= protein_coding
chr4	13367724	13484365	13367724	13484365	-	ENST00000330852.9@RAB28	ENST00000330852.9	protein_coding	13484076,13479430,13474318,13460699,13381491,13376545,13367724	13484365,13479526,13474406,13460828,13381594,13376622,13368650	Gene ID= ENSG00000157869.14 TPM= 26.07 Transcript Type= protein_coding
chr4	13375683	13484350	13375683	13484350	-	transcript921.chr4.nic@RAB28	transcript921.chr4.nic	protein_coding	13484076,13479430,13474318,13460699,13381491,13375683	13484350,13479526,13474406,13460828,13381594,13376622	Gene ID= ENSG00000157869.14 TPM= 2.34 Transcript Type= NA
chr4	13367724	13484331	13367724	13484331	-	ENST00000508274.5@RAB28	ENST00000508274.5	protein_coding	13484076,13479430,13474318,13381491,13376545,13367724	13484331,13479526,13474406,13381594,13376622,13368650	Gene ID= ENSG00000157869.14 TPM= 1.55 Transcript Type= nonsense_mediated_decay
chr4	13608548	13627718	13608548	13627718	-	transcript927.chr4.nic@BOD1L1	transcript927.chr4.nic	protein_coding	13627345,13619943,13615312,13614196,13613512,13610934,13609295,13608548	13627718,13620067,13615502,13614810,13613661,13611100,13609406,13608668	Gene ID= ENSG00000038219.12 TPM= 5.84 Transcript Type= NA
chr4	13625532	13627724	13625532	13627724	-	transcript930.chr4.nic@BOD1L1	transcript930.chr4.nic	protein_coding	13627345,13625532	13627724,13626312	Gene ID= ENSG00000038219.12 TPM= 2.34 Transcript Type= NA
chr4	13568738	13627723	13568738	13627723	-	ENST00000040738.9@BOD1L1	ENST00000040738.9	protein_coding	13627345,13619943,13615312,13614196,13613512,13610934,13609295,13608530,13607117,13598946,13597104,13595860,13591923,13590386,13588722,13587699,13586396,13582652,13582237,13581132,13581020,13579928,13577582,13577403,13576838,13568738	13627723,13620067,13615502,13614810,13613661,13611100,13609406,13608668,13607189,13605084,13597168,13595944,13591966,13590446,13588792,13587771,13586475,13582736,13582310,13581207,13581054,13579973,13577631,13577487,13576991,13570128	Gene ID= ENSG00000038219.12 TPM= 4.67 Transcript Type= protein_coding
chr4	14470465	14888169	14470465	14888169	-	ENST00000505089.6@LINC00504	ENST00000505089.6	lincRNA	14888059,14859543,14700743,14614280,14572147,14477347,14470465	14888169,14859616,14700781,14614416,14572246,14477458,14474563	Gene ID= ENSG00000248360.7 TPM= 1.17 Transcript Type= lincRNA
chr4	15002674	15070153	15002674	15070153	+	ENST00000538197.5@CPEB2	ENST00000538197.5	protein_coding	15002674,15007305,15008338,15017188,15033161,15040464,15052414,15054128,15058421,15059187,15062079,15066153	15004335,15007586,15008427,15017278,15033211,15040487,15052584,15054217,15058539,15059301,15062260,15070153	Gene ID= ENSG00000137449.15 TPM= 3.79 Transcript Type= protein_coding
chr4	15003828	15070149	15003828	15070149	+	transcript941.chr4.nnic@CPEB2	transcript941.chr4.nnic	protein_coding	15003828,15004174,15007305,15017188,15033161,15040464,15052414,15054128,15058421,15059187,15062079,15066153	15004107,15004335,15007586,15017278,15033211,15040487,15052584,15054217,15058539,15059301,15062260,15070149	Gene ID= ENSG00000137449.15 TPM= 4.96 Transcript Type= NA
chr4	15002674	15070153	15002674	15070153	+	ENST00000442003.6@CPEB2	ENST00000442003.6	protein_coding	15002674,15007305,15017188,15033161,15040464,15052414,15054128,15058421,15059187,15062079,15066153	15004335,15007595,15017278,15033211,15040487,15052584,15054217,15058539,15059301,15062260,15070153	Gene ID= ENSG00000137449.15 TPM= 9.63 Transcript Type= protein_coding
chr4	15003936	15070151	15003936	15070151	+	ENST00000382401.7@CPEB2	ENST00000382401.7	protein_coding	15003936,15007305,15017188,15033161,15052414,15054128,15058421,15059187,15062079,15066153	15004335,15007595,15017278,15033211,15052584,15054217,15058539,15059301,15062260,15070151	Gene ID= ENSG00000137449.15 TPM= 4.96 Transcript Type= protein_coding
chr4	15003753	15006431	15003753	15006431	+	transcript944.chr4.nnic@NA	transcript944.chr4.nnic	NA	15003753	15006431	Gene ID= novel_gene_chr4_945 TPM= 3.5 Transcript Type= NA
chr4	15339936	15446165	15339936	15446165	+	ENST00000295297.4@C1QTNF7	ENST00000295297.4	protein_coding	15339936,15435736,15442168	15340207,15435981,15446165	Gene ID= ENSG00000163145.12 TPM= 7.01 Transcript Type= protein_coding
chr4	15427789	15443136	15427789	15443136	+	ENST00000444304.2@C1QTNF7	ENST00000444304.2	protein_coding	15427789,15435736,15442168	15428106,15435981,15443136	Gene ID= ENSG00000163145.12 TPM= 3.5 Transcript Type= protein_coding
chr4	15469930	15601557	15469930	15601557	+	ENST00000503292.5@CC2D2A	ENST00000503292.5	protein_coding	15469930,15473222,15475915,15478723,15480704,15502429,15502822,15510139,15511247,15514707,15515868,15516625,15527447,15528620,15533193,15536920,15537899,15540837,15550824,15553158,15555072,15557304,15559165,15560531,15563355,15567377,15567677,15569293,15570398,15574150,15579968,15586157,15587816,15589545,15596085,15597407,15599529,15601237	15470057,15473255,15475971,15478806,15480827,15502517,15502923,15510240,15511423,15514869,15516004,15516756,15527656,15528726,15533333,15537076,15538137,15541014,15550980,15553305,15555210,15557507,15559257,15560622,15563522,15567482,15567786,15569389,15570496,15574326,15580171,15586246,15587929,15589679,15596207,15597465,15599706,15601557	Gene ID= ENSG00000048342.15 TPM= 2.34 Transcript Type= protein_coding
chr4	15469887	15516813	15469887	15516813	+	transcript959.chr4.nic@CC2D2A	transcript959.chr4.nic	protein_coding	15469887,15475915,15478723,15480704,15502429,15502822,15510139,15511247,15514707,15515868,15516625	15470057,15475971,15478806,15480827,15502517,15502923,15510240,15511423,15514869,15516004,15516813	Gene ID= ENSG00000048342.15 TPM= 2.34 Transcript Type= NA
chr4	15469912	15482259	15469912	15482259	+	ENST00000515124.5@CC2D2A	ENST00000515124.5	protein_coding	15469912,15475915,15478723,15480704,15481197	15470057,15475971,15478806,15480827,15482259	Gene ID= ENSG00000048342.15 TPM= 1.17 Transcript Type= protein_coding
chr4	15604539	15655412	15604539	15655412	-	ENST00000341285.7@FBXL5	ENST00000341285.7	protein_coding	15655204,15644493,15640788,15638508,15636494,15630666,15627885,15626873,15625252,15612266,15604539	15655412,15644708,15640883,15638694,15636676,15630791,15628033,15626955,15625977,15612414,15605799	Gene ID= ENSG00000118564.14 TPM= 26.85 Transcript Type= protein_coding
chr4	15605006	15655382	15605006	15655382	-	ENST00000412094.6@FBXL5	ENST00000412094.6	protein_coding	15655204,15644493,15640788,15638508,15636494,15630666,15627885,15626873,15625252,15612266,15605006	15655382,15644657,15640883,15638694,15636676,15630791,15628033,15626955,15625977,15612414,15605799	Gene ID= ENSG00000118564.14 TPM= 30.65 Transcript Type= protein_coding
chr4	15605006	15655341	15605006	15655341	-	ENST00000511441.5@FBXL5	ENST00000511441.5	protein_coding	15655204,15644493,15641524,15640788,15638508,15636494,15630666,15627885,15626873,15625252,15612266,15605006	15655341,15644708,15641627,15640883,15638694,15636676,15630791,15628033,15626955,15625977,15612414,15605799	Gene ID= ENSG00000118564.14 TPM= 2.63 Transcript Type= nonsense_mediated_decay
chr4	15653645	15655388	15653645	15655388	-	transcript981.chr4.nnic@NA	transcript981.chr4.nnic	NA	15653645	15655388	Gene ID= novel_gene_chr4_982 TPM= 3.5 Transcript Type= NA
chr4	15681729	15690439	15681729	15690439	+	ENST00000622362.1@FAM200B	ENST00000622362.1	protein_coding	15681729,15686236	15681901,15690439	Gene ID= ENSG00000237765.6 TPM= 8.17 Transcript Type= protein_coding
chr4	15681757	15687050	15681757	15687050	+	ENST00000503617.1@FAM200B	ENST00000503617.1	protein_coding	15681757,15686236	15681968,15687050	Gene ID= ENSG00000237765.6 TPM= 1.17 Transcript Type= protein_coding
chr4	15681754	15686606	15681754	15686606	+	ENST00000510032.5@FAM200B	ENST00000510032.5	protein_coding	15681754,15686236	15682021,15686606	Gene ID= ENSG00000237765.6 TPM= 4.67 Transcript Type= processed_transcript
chr4	15681806	15689101	15681806	15689101	+	ENST00000422728.2@FAM200B	ENST00000422728.2	protein_coding	15681806,15686236	15681901,15689101	Gene ID= ENSG00000237765.6 TPM= 5.84 Transcript Type= protein_coding
chr4	15681757	15686568	15681757	15686568	+	ENST00000502502.5@FAM200B	ENST00000502502.5	protein_coding	15681757,15684850,15686236	15681901,15684959,15686568	Gene ID= ENSG00000237765.6 TPM= 1.17 Transcript Type= processed_transcript
chr4	15702950	15732173	15702950	15732173	+	ENST00000265016.8@BST1	ENST00000265016.8	protein_coding	15702950,15705515,15707511,15711807,15715285,15715707,15718907,15722875,15731740	15703332,15705641,15707646,15711889,15715361,15715799,15718993,15722934,15732173	Gene ID= ENSG00000109743.10 TPM= 11.68 Transcript Type= protein_coding
chr4	15935569	15938740	15935569	15938740	-	ENST00000382333.1@FGFBP1	ENST00000382333.1	protein_coding	15938687,15938251,15935569	15938740,15938471,15936652	Gene ID= ENSG00000137440.4 TPM= 5.84 Transcript Type= protein_coding
chr4	15960243	15963236	15960243	15963236	-	ENST00000259989.6@FGFBP2	ENST00000259989.6	protein_coding	15962438,15960243	15963236,15960611	Gene ID= ENSG00000137441.7 TPM= 5.84 Transcript Type= protein_coding
chr4	16161291	16226909	16161291	16226909	-	transcript1023.chr4.nic@TAPT1	transcript1023.chr4.nic	protein_coding	16226259,16191361,16188220,16186781,16186535,16179577,16176119,16174670,16174204,16170653,16166633,16161291	16226909,16191523,16188355,16186878,16186604,16179657,16176228,16174729,16174272,16170729,16166793,16163537	Gene ID= ENSG00000169762.16 TPM= 7.01 Transcript Type= NA
chr4	16501541	16898911	16501541	16898911	-	transcript1033.chr4.nnic@LDB2	transcript1033.chr4.nnic	protein_coding	16898354,16759158,16595703,16588710,16585922,16511981,16508541,16505840,16501541	16898911,16759260,16595875,16588832,16586005,16512104,16508683,16505982,16502873	Gene ID= ENSG00000169744.12 TPM= 7.47 Transcript Type= NA
chr4	16501541	16898911	16501541	16898911	-	transcript1036.chr4.nic@LDB2	transcript1036.chr4.nic	protein_coding	16898354,16759158,16595703,16588710,16585922,16511981,16508535,16501541	16898911,16759260,16595875,16588832,16586005,16512104,16508683,16502873	Gene ID= ENSG00000169744.12 TPM= 10.98 Transcript Type= NA
chr4	16501546	16898634	16501546	16898634	-	ENST00000502640.5@LDB2	ENST00000502640.5	protein_coding	16898354,16759158,16595703,16588710,16585922,16511981,16508535,16501546	16898634,16759260,16595875,16588832,16586005,16512104,16508686,16503131	Gene ID= ENSG00000169744.12 TPM= 9.81 Transcript Type= protein_coding
chr4	16501541	16898594	16501541	16898594	-	ENST00000441778.6@LDB2	ENST00000441778.6	protein_coding	16898354,16759158,16595703,16588710,16585922,16511981,16508535,16505840,16501541	16898594,16759260,16595875,16588832,16586005,16512104,16508686,16505982,16502873	Gene ID= ENSG00000169744.12 TPM= 31.99 Transcript Type= protein_coding
chr4	16501541	16898562	16501541	16898562	-	ENST00000515064.5@LDB2	ENST00000515064.5	protein_coding	16898354,16759158,16595703,16588710,16585922,16511981,16508541,16501541	16898562,16759260,16595875,16588832,16586005,16512104,16508686,16502873	Gene ID= ENSG00000169744.12 TPM= 5.14 Transcript Type= protein_coding
chr4	17458613	17512086	17458613	17512086	-	transcript1043.chr4.nnic@QDPR	transcript1043.chr4.nnic	protein_coding	17511950,17509271,17504379,17501719,17492232,17490662,17487179,17460091,17458613	17512086,17509363,17504475,17501859,17492340,17490745,17487236,17460277,17459043	Gene ID= ENSG00000151552.11 TPM= 2.34 Transcript Type= NA
chr4	17486398	17512234	17486398	17512234	-	ENST00000281243.9@QDPR	ENST00000281243.9	protein_coding	17511950,17509271,17504379,17501719,17492232,17490662,17486398	17512234,17509363,17504475,17501859,17492340,17490745,17487236	Gene ID= ENSG00000151552.11 TPM= 40.87 Transcript Type= protein_coding
chr4	17486398	17512069	17486398	17512069	-	ENST00000507439.5@QDPR	ENST00000507439.5	protein_coding	17511950,17509271,17504379,17501719,17490662,17486398	17512069,17509363,17504475,17501859,17490745,17487236	Gene ID= ENSG00000151552.11 TPM= 5.84 Transcript Type= nonsense_mediated_decay
chr4	17486527	17512086	17486527	17512086	-	ENST00000428702.6@QDPR	ENST00000428702.6	protein_coding	17511950,17504379,17501719,17492232,17490662,17486527	17512086,17504475,17501859,17492340,17490745,17487236	Gene ID= ENSG00000151552.11 TPM= 4.67 Transcript Type= protein_coding
chr4	17577192	17607968	17577192	17607968	+	ENST00000226299.8@LAP3	ENST00000226299.8	protein_coding	17577192,17579824,17581760,17582288,17583483,17584972,17588819,17595410,17597046,17598456,17604588,17606829,17607400	17577567,17579939,17581814,17582393,17583642,17585136,17588977,17595534,17597134,17598558,17604667,17606938,17607968	Gene ID= ENSG00000002549.12 TPM= 253.37 Transcript Type= protein_coding
chr4	17614631	17634105	17614631	17634105	+	ENST00000237380.11@MED28	ENST00000237380.11	protein_coding	17614631,17619901,17621587,17623601	17614813,17619967,17621699,17634105	Gene ID= ENSG00000118579.12 TPM= 26.85 Transcript Type= protein_coding
chr4	17634418	17635631	17634418	17635631	+	transcript1076.chr4.nnic@NA	transcript1076.chr4.nnic	NA	17634418	17635631	Gene ID= novel_gene_chr4_1077 TPM= 2.34 Transcript Type= NA
chr4	17800655	17810758	17800655	17810758	-	ENST00000382247.5@DCAF16	ENST00000382247.5	protein_coding	17810447,17805107,17800655	17810758,17805225,17804771	Gene ID= ENSG00000163257.10 TPM= 8.17 Transcript Type= protein_coding
chr4	17810902	17844862	17810902	17844862	+	ENST00000251496.6@NCAPG	ENST00000251496.6	protein_coding	17810902,17812221,17812917,17814853,17815274,17817261,17817939,17822983,17823647,17824968,17825382,17828278,17830997,17834299,17837159,17837627,17839676,17840071,17840607,17842310,17843302	17811188,17812424,17813145,17814998,17815358,17817453,17818088,17823123,17823770,17825057,17825561,17828388,17831116,17834523,17837340,17837801,17839837,17840209,17840693,17842379,17844862	Gene ID= ENSG00000109805.9 TPM= 1.17 Transcript Type= protein_coding
chr4	20251902	20282708	20251902	20282708	+	transcript1109.chr4.nnic@SLIT2	transcript1109.chr4.nnic	protein_coding	20251902,20256672,20257868,20268810,20280878	20253994,20256743,20257939,20268881,20282708	Gene ID= ENSG00000145147.19 TPM= 10.51 Transcript Type= NA
chr4	20251902	20282707	20251902	20282707	+	transcript1111.chr4.nnic@SLIT2	transcript1111.chr4.nnic	protein_coding	20251902,20256672,20257868,20268810,20281429	20253994,20256743,20257939,20268881,20282707	Gene ID= ENSG00000145147.19 TPM= 14.01 Transcript Type= NA
chr4	22411989	22516074	22411989	22516074	-	transcript1121.chr4.nic@ADGRA3	transcript1121.chr4.nic	protein_coding	22515528,22473772,22461737,22454866,22447440,22444973,22442650,22438256,22436440,22435311,22424191,22420886,22413601,22411989	22516074,22473843,22461808,22454937,22447511,22445133,22442863,22438420,22436641,22435466,22424352,22421089,22413814,22413390	Gene ID= ENSG00000152990.13 TPM= 2.34 Transcript Type= NA
chr4	22387375	22516054	22387375	22516054	-	ENST00000334304.9@ADGRA3	ENST00000334304.9	protein_coding	22515528,22473772,22461737,22454866,22447440,22444973,22442650,22438256,22436440,22435311,22424191,22420886,22413601,22413182,22402675,22401431,22392545,22389088,22387375	22516054,22473843,22461808,22454937,22447511,22445133,22442863,22438420,22436641,22435466,22424352,22421089,22413814,22413390,22402799,22401554,22392690,22389183,22388947	Gene ID= ENSG00000152990.13 TPM= 31.53 Transcript Type= protein_coding
chr4	23806704	23808266	23806704	23808266	+	transcript1124.chr4.nnic@NA	transcript1124.chr4.nnic	NA	23806704	23808266	Gene ID= novel_gene_chr4_1125 TPM= 2.34 Transcript Type= NA
chr4	24527475	24584576	24527475	24584576	-	transcript1129.chr4.nic@DHX15	transcript1129.chr4.nic	protein_coding	24584323,24576243,24570654,24556251,24554725,24548855,24542940,24541873,24540840,24537051,24532864,24529601,24527475	24584576,24576678,24570847,24556410,24554943,24549022,24543026,24542022,24540948,24540299,24533054,24529770,24528041	Gene ID= ENSG00000109606.12 TPM= 11.68 Transcript Type= NA
chr4	24527475	24584550	24527475	24584550	-	ENST00000336812.4@DHX15	ENST00000336812.4	protein_coding	24584323,24576243,24570654,24556251,24554725,24548855,24542940,24541873,24540840,24540108,24537051,24532864,24529601,24527475	24584550,24576678,24570847,24556410,24554943,24549022,24543026,24542022,24540948,24540299,24537173,24533054,24529770,24528041	Gene ID= ENSG00000109606.12 TPM= 155.29 Transcript Type= protein_coding
chr4	24554012	24559394	24554012	24559394	+	transcript1137.chr4.nnic@NA	transcript1137.chr4.nnic	NA	24554012	24559394	Gene ID= novel_gene_chr4_1138 TPM= 8.17 Transcript Type= NA
chr4	24795530	24800842	24795530	24800842	+	transcript1144.chr4.nnic@SOD3	transcript1144.chr4.nnic	protein_coding	24795530,24799506,24800619	24795651,24800528,24800842	Gene ID= ENSG00000109610.5 TPM= 67.14 Transcript Type= NA
chr4	24795463	24800842	24795463	24800842	+	ENST00000382120.3@SOD3	ENST00000382120.3	protein_coding	24795463,24799506	24795651,24800842	Gene ID= ENSG00000109610.5 TPM= 361.37 Transcript Type= protein_coding
chr4	24796624	24799508	24796624	24799508	-	transcript1147.chr4.nnic@NA	transcript1147.chr4.nnic	NA	24796624	24799508	Gene ID= novel_gene_chr4_1148 TPM= 7.01 Transcript Type= NA
chr4	24806117	24913045	24806117	24913045	-	transcript1150.chr4.nnic@CCDC149	transcript1150.chr4.nnic	protein_coding	24912817,24910772,24876536,24873681,24853072,24838156,24837228,24836436,24834948,24831506,24822497,24819859,24806117	24913045,24910826,24876697,24873719,24853179,24838272,24837400,24836508,24835032,24831650,24822573,24819975,24808819	Gene ID= ENSG00000181982.18 TPM= 8.17 Transcript Type= NA
chr4	24906365	24913045	24906365	24913045	-	transcript1156.chr4.nnic@CCDC149	transcript1156.chr4.nnic	protein_coding	24912817,24910772,24906365	24913045,24910826,24906849	Gene ID= ENSG00000181982.18 TPM= 2.34 Transcript Type= NA
chr4	25120014	25160442	25120014	25160442	-	ENST00000382103.6@SEPSECS	ENST00000382103.6	protein_coding	25160256,25158953,25156856,25156037,25154998,25151960,25145004,25144774,25127264,25125694,25120014	25160442,25159107,25156974,25156195,25155151,25152062,25145133,25144865,25127357,25125784,25124225	Gene ID= ENSG00000109618.11 TPM= 2.34 Transcript Type= protein_coding
chr4	25234026	25279092	25234026	25279092	+	transcript1170.chr4.nnic@PI4K2B	transcript1170.chr4.nnic	protein_coding	25234026,25252321,25255065,25256543,25259052,25260524,25263750,25268443,25269144,25277014	25234431,25252475,25255265,25256674,25259190,25260591,25263849,25268576,25269203,25279092	Gene ID= ENSG00000038210.12 TPM= 3.5 Transcript Type= NA
chr4	25233975	25279092	25233975	25279092	+	ENST00000264864.7@PI4K2B	ENST00000264864.7	protein_coding	25233975,25252321,25255065,25256543,25259037,25260524,25263750,25268443,25269144,25277014	25234431,25252475,25255265,25256674,25259190,25260591,25263849,25268576,25269203,25279092	Gene ID= ENSG00000038210.12 TPM= 46.7 Transcript Type= protein_coding
chr4	25234011	25259712	25234011	25259712	+	transcript1177.chr4.nic@PI4K2B	transcript1177.chr4.nic	protein_coding	25234011,25252321,25255065,25256543	25234431,25252475,25255265,25259712	Gene ID= ENSG00000038210.12 TPM= 2.34 Transcript Type= NA
chr4	25312774	25366115	25312774	25366115	+	transcript1184.chr4.nic@ZCCHC4	transcript1184.chr4.nic	protein_coding	25312774,25314046,25315318,25333183,25333908,25345548,25349492,25351589,25361859,25362226,25364454,25365022	25312936,25314164,25315400,25333458,25333988,25345620,25349642,25351689,25361980,25362301,25364505,25366115	Gene ID= ENSG00000168228.14 TPM= 2.34 Transcript Type= NA
chr4	25377242	25418489	25377242	25418489	+	transcript1192.chr4.nnic@ANAPC4	transcript1192.chr4.nnic	protein_coding	25377242,25377418,25380374,25383261,25388500,25388717,25388838,25390136,25390911,25392338,25393805,25394310,25394671,25394829,25396664,25396848,25402971,25405573,25406829,25407197,25409698,25413645,25414324,25414466,25414599,25415400,25416425,25417616,25418155	25377344,25377556,25380479,25383393,25388574,25388743,25388882,25390220,25391015,25392421,25393891,25394374,25394713,25394905,25396764,25396899,25403026,25405619,25406885,25407253,25409791,25413742,25414385,25414504,25414700,25415540,25416598,25417739,25418489	Gene ID= ENSG00000053900.10 TPM= 4.67 Transcript Type= NA
chr4	25377265	25418489	25377265	25418489	+	transcript1200.chr4.nic@ANAPC4	transcript1200.chr4.nic	protein_coding	25377265,25377418,25380374,25383261,25388500,25388717,25388838,25390136,25390911,25393805,25394310,25394671,25394829,25396664,25396848,25402971,25405573,25406829,25407197,25409698,25413645,25414324,25414466,25414599,25415466,25416425,25417616,25418155	25377344,25377556,25380479,25383393,25388574,25388743,25388882,25390220,25392421,25393891,25394374,25394713,25394905,25396764,25396899,25403026,25405619,25406885,25407253,25409791,25413742,25414385,25414504,25414700,25415540,25416598,25417739,25418489	Gene ID= ENSG00000053900.10 TPM= 2.34 Transcript Type= NA
chr4	25377233	25418489	25377233	25418489	+	transcript1202.chr4.nic@ANAPC4	transcript1202.chr4.nic	protein_coding	25377233,25380374,25383261,25388500,25388717,25388838,25390136,25390911,25392338,25393805,25394310,25394671,25394829,25396664,25396848,25402971,25405573,25406829,25407197,25409698,25413645,25414324,25414466,25414599,25415466,25416425,25417616,25418155	25377556,25380479,25383393,25388574,25388743,25388882,25390220,25391015,25392421,25393891,25394374,25394713,25394905,25396764,25396899,25403026,25405619,25406885,25407253,25409791,25413742,25414385,25414504,25414700,25415540,25416598,25417739,25418489	Gene ID= ENSG00000053900.10 TPM= 5.84 Transcript Type= NA
chr4	25377256	25418489	25377256	25418489	+	transcript1203.chr4.nic@ANAPC4	transcript1203.chr4.nic	protein_coding	25377256,25377418,25380374,25383261,25388500,25388717,25388838,25390136,25390911,25392338,25393805,25394310,25394671,25394829,25396664,25396848,25402971,25405573,25406829,25407197,25409698,25413645,25414599,25415466,25416425,25417616,25418155	25377344,25377556,25380479,25383393,25388574,25388743,25388882,25390220,25391015,25392421,25393891,25394374,25394713,25394905,25396764,25396899,25403026,25405619,25406885,25407253,25409791,25414504,25414700,25415540,25416598,25417739,25418489	Gene ID= ENSG00000053900.10 TPM= 2.34 Transcript Type= NA
chr4	25504078	25506966	25504078	25506966	-	transcript1263.chr4.nnic@NA	transcript1263.chr4.nnic	NA	25504078	25506966	Gene ID= novel_gene_chr4_1264 TPM= 2.34 Transcript Type= NA
chr4	25553468	25569291	25553468	25569291	-	transcript1251.chr4.nnic@NA	transcript1251.chr4.nnic	NA	25569100,25553468	25569291,25554965	Gene ID= novel_gene_chr4_1252 TPM= 3.5 Transcript Type= NA
chr4	25651450	25655796	25651450	25655796	-	transcript1259.chr4.nnic@NA	transcript1259.chr4.nnic	NA	25651450	25655796	Gene ID= novel_gene_chr4_1260 TPM= 12.84 Transcript Type= NA
chr4	25653855	25655798	25653855	25655798	-	transcript1257.chr4.nnic@NA	transcript1257.chr4.nnic	NA	25653855	25655798	Gene ID= novel_gene_chr4_1258 TPM= 35.03 Transcript Type= NA
chr4	25655844	25678748	25655844	25678748	+	ENST00000382051.7@SLC34A2	ENST00000382051.7	protein_coding	25655844,25662498,25662705,25664202,25666128,25667880,25669647,25670738,25671601,25673087,25674296,25674505,25676135	25655890,25662612,25662842,25664330,25666271,25667991,25669842,25670833,25671721,25673254,25674412,25674629,25678748	Gene ID= ENSG00000157765.11 TPM= 2056.31 Transcript Type= protein_coding
chr4	25668892	25674225	25668892	25674225	-	transcript1261.chr4.nnic@NA	transcript1261.chr4.nnic	NA	25668892	25674225	Gene ID= novel_gene_chr4_1262 TPM= 18.68 Transcript Type= NA
chr4	25747427	25862959	25747427	25862959	-	ENST00000399878.7@SEL1L3	ENST00000399878.7	protein_coding	25862675,25847294,25835197,25833448,25832995,25830098,25821996,25819808,25818138,25804541,25802283,25790455,25788224,25784228,25782242,25779076,25776277,25767740,25767525,25765326,25758941,25757688,25757534,25747427	25862959,25847864,25835323,25833569,25833110,25830156,25822128,25819940,25818278,25804752,25802462,25790574,25788364,25784290,25782418,25779203,25776360,25767830,25767609,25765435,25759068,25757790,25757606,25748564	Gene ID= ENSG00000091490.10 TPM= 154.12 Transcript Type= protein_coding
chr4	25793853	25797203	25793853	25797203	+	transcript1292.chr4.nnic@NA	transcript1292.chr4.nnic	NA	25793853	25797203	Gene ID= novel_gene_chr4_1293 TPM= 4.67 Transcript Type= NA
chr4	25914204	25929812	25914204	25929812	+	ENST00000506197.2@SMIM20	ENST00000506197.2	protein_coding	25914204,25928313,25929154	25914422,25928369,25929812	Gene ID= ENSG00000250317.8 TPM= 31.53 Transcript Type= protein_coding
chr4	26023869	26025075	26023869	26025075	+	transcript1296.chr4.nnic@NA	transcript1296.chr4.nnic	NA	26023869	26025075	Gene ID= novel_gene_chr4_1297 TPM= 2.34 Transcript Type= NA
chr4	26319710	26435128	26319710	26435128	+	ENST00000342295.5@RBPJ	ENST00000342295.5	protein_coding	26319710,26320700,26386353,26406175,26415475,26420551,26424342,26424631,26428720,26429898,26430419,26430692	26319888,26320815,26386391,26406270,26415640,26420725,26424479,26424743,26428860,26430053,26430522,26435128	Gene ID= ENSG00000168214.20 TPM= 2.92 Transcript Type= protein_coding
chr4	26320807	26435128	26320807	26435128	+	ENST00000355476.7@RBPJ	ENST00000355476.7	protein_coding	26320807,26362446,26386353,26406175,26415475,26420551,26424342,26424631,26428720,26429898,26430419,26430692	26321048,26362628,26386391,26406270,26415640,26420725,26424479,26424743,26428860,26430053,26430522,26435128	Gene ID= ENSG00000168214.20 TPM= 26.27 Transcript Type= protein_coding
chr4	26321006	26431211	26321006	26431211	+	transcript1310.chr4.nic@RBPJ	transcript1310.chr4.nic	protein_coding	26321006,26386353,26406175,26415475,26420551,26424342,26424631,26428720,26429898,26430692	26321048,26386391,26406270,26415640,26420725,26424479,26424743,26428860,26430053,26431211	Gene ID= ENSG00000168214.20 TPM= 3.5 Transcript Type= NA
chr4	26321014	26431183	26321014	26431183	+	transcript1311.chr4.nic@RBPJ	transcript1311.chr4.nic	protein_coding	26321014,26386353,26406175,26415475,26420551,26424342,26424631,26428720,26429898,26430692	26321048,26386391,26406270,26415640,26420725,26424479,26424743,26428860,26430522,26431183	Gene ID= ENSG00000168214.20 TPM= 2.34 Transcript Type= NA
chr4	26320811	26420838	26320811	26420838	+	transcript1314.chr4.nic@RBPJ	transcript1314.chr4.nic	protein_coding	26320811,26386353,26406175,26415475,26420551	26321048,26386391,26406270,26415640,26420838	Gene ID= ENSG00000168214.20 TPM= 2.34 Transcript Type= NA
chr4	26583916	26755351	26583916	26755351	+	ENST00000264866.8@TBC1D19	ENST00000264866.8	protein_coding	26583916,26613169,26614408,26620613,26637211,26638771,26640141,26659597,26666333,26672149,26673776,26683675,26688345,26717933,26720081,26735455,26739864,26742508,26748411,26753820,26754873	26584292,26613241,26614453,26620688,26637285,26638834,26640187,26659707,26666405,26672187,26673888,26683749,26688407,26718017,26720125,26735487,26739973,26742599,26748526,26753890,26755351	Gene ID= ENSG00000109680.10 TPM= 4.67 Transcript Type= protein_coding
chr4	26857608	26858917	26857608	26858917	+	transcript1342.chr4.nnic@NA	transcript1342.chr4.nnic	NA	26857608	26858917	Gene ID= novel_gene_chr4_1343 TPM= 11.68 Transcript Type= NA
chr4	26860828	26961028	26860828	26961028	+	transcript1340.chr4.nic@STIM2	transcript1340.chr4.nic	protein_coding	26860828,26919504,26957612	26861369,26919634,26961028	Gene ID= ENSG00000109689.15 TPM= 8.17 Transcript Type= NA
chr4	30720415	30732973	30720415	30732973	+	ENST00000361762.3@PCDH7	ENST00000361762.3	protein_coding	30720415,30730753	30724596,30732973	Gene ID= ENSG00000169851.15 TPM= 2.34 Transcript Type= protein_coding
chr4	36065998	36244509	36065998	36244509	-	ENST00000303965.8@ARAP2	ENST00000303965.8	protein_coding	36244179,36228582,36214422,36213243,36212396,36210390,36193578,36187451,36177827,36166932,36164914,36161465,36160459,36159331,36158730,36150900,36148405,36147548,36147296,36133226,36128533,36124862,36121179,36119650,36117061,36114170,36107565,36091881,36083368,36082251,36080216,36073689,36065998	36244509,36229645,36214480,36213319,36212487,36210743,36193647,36187571,36178005,36167047,36165113,36161550,36160641,36159505,36158864,36151044,36148507,36147746,36147359,36133389,36128745,36124967,36121326,36119718,36117135,36114287,36107693,36092020,36083450,36082286,36080279,36073823,36068278	Gene ID= ENSG00000047365.11 TPM= 8.17 Transcript Type= protein_coding
chr4	37453941	37591826	37453941	37591826	+	ENST00000381980.8@C4orf19	ENST00000381980.8	protein_coding	37453941,37558027,37588846,37590088	37454040,37558076,37588899,37591826	Gene ID= ENSG00000154274.14 TPM= 11.68 Transcript Type= protein_coding
chr4	37826633	37862937	37826633	37862937	+	ENST00000381967.8@PGM2	ENST00000381967.8	protein_coding	37826633,37829964,37834618,37837529,37839848,37840066,37844364,37845633,37846931,37847202,37848522,37850184,37855608,37861510	37826813,37830131,37834724,37837613,37839931,37840259,37844553,37845730,37847111,37847295,37848651,37850373,37855741,37862937	Gene ID= ENSG00000169299.13 TPM= 25.69 Transcript Type= protein_coding
chr4	37977295	38137619	37977295	38137619	+	transcript1391.chr4.nnic@TBC1D1	transcript1391.chr4.nnic	protein_coding	37977295,38014509,38018354,38020591,38021586,38027788,38035588,38044362,38045817,38049618,38054199,38089932,38095929,38102999,38115710,38118033,38124962,38133084,38137135	37977529,38014973,38018443,38020695,38021718,38027879,38035698,38044490,38045903,38049859,38054338,38090117,38096090,38103157,38115954,38118192,38125131,38133257,38137619	Gene ID= ENSG00000065882.15 TPM= 4.87 Transcript Type= NA
chr4	37977295	38139173	37977295	38139173	+	transcript1394.chr4.nic@TBC1D1	transcript1394.chr4.nic	protein_coding	37977295,38014509,38018354,38020591,38021586,38027788,38035588,38044362,38045817,38049618,38054199,38089932,38095929,38102999,38115710,38118033,38124962,38133084,38137135	37977529,38014973,38018443,38020695,38021718,38027879,38035698,38044490,38045903,38049898,38054338,38090117,38096090,38103157,38115954,38118192,38125131,38133257,38139173	Gene ID= ENSG00000065882.15 TPM= 20.81 Transcript Type= NA
chr4	37891087	38139173	37891087	38139173	+	ENST00000261439.8@TBC1D1	ENST00000261439.8	protein_coding	37891087,37902003,38014509,38018354,38020591,38021586,38027788,38035588,38044362,38045817,38049618,38054199,38089932,38095929,38102999,38115710,38118033,38124962,38133084,38137135	37891348,37902512,38014973,38018443,38020695,38021718,38027879,38035698,38044490,38045903,38049898,38054338,38090117,38096090,38103157,38115954,38118192,38125131,38133257,38139173	Gene ID= ENSG00000065882.15 TPM= 9.34 Transcript Type= protein_coding
chr4	37891099	37952812	37891099	37952812	+	ENST00000402522.1@TBC1D1	ENST00000402522.1	protein_coding	37891099,37902003,37952006	37891348,37902512,37952812	Gene ID= ENSG00000065882.15 TPM= 3.5 Transcript Type= protein_coding
chr4	38612701	38664628	38612701	38664628	-	ENST00000440181.5@KLF3-AS1	ENST00000440181.5	processed_transcript	38664176,38635956,38630500,38628039,38625602,38624422,38614625,38612701	38664628,38636058,38630581,38628102,38625762,38625283,38614708,38613259	Gene ID= ENSG00000231160.9 TPM= 1.17 Transcript Type= antisense_RNA
chr4	38664196	38701042	38664196	38701042	+	ENST00000261438.9@KLF3	ENST00000261438.9	protein_coding	38664196,38680587,38688585,38689729,38694746,38697082	38664461,38680682,38689071,38689879,38694906,38701042	Gene ID= ENSG00000109787.12 TPM= 87.57 Transcript Type= protein_coding
chr4	38796257	38804791	38796257	38804791	-	ENST00000308979.6@TLR1	ENST00000308979.6	protein_coding	38804754,38804306,38800857,38796257	38804791,38804382,38800948,38798898	Gene ID= ENSG00000174125.7 TPM= 1.17 Transcript Type= protein_coding
chr4	38814360	38816534	38814360	38816534	-	transcript1417.chr4.nnic@NA	transcript1417.chr4.nnic	NA	38814360	38816534	Gene ID= novel_gene_chr4_1418 TPM= 2.34 Transcript Type= NA
chr4	38822897	38824086	38822897	38824086	-	transcript1419.chr4.nnic@NA	transcript1419.chr4.nnic	NA	38822897	38824086	Gene ID= novel_gene_chr4_1420 TPM= 2.34 Transcript Type= NA
chr4	38867761	38945739	38867761	38945739	+	transcript1425.chr4.nic@FAM114A1	transcript1425.chr4.nic	protein_coding	38867761,38878071,38891743,38905522,38905755,38908592,38914921,38922770,38929242,38931451,38932235,38935718,38940968,38943456	38867834,38878426,38891830,38905635,38905861,38908726,38915073,38922893,38929333,38931612,38932374,38935790,38941021,38945739	Gene ID= ENSG00000197712.11 TPM= 8.17 Transcript Type= NA
chr4	38867816	38945739	38867816	38945739	+	ENST00000358869.4@FAM114A1	ENST00000358869.4	protein_coding	38867816,38868398,38878071,38891743,38905522,38905755,38908592,38914921,38922770,38929242,38931451,38932235,38935718,38940968,38943456	38867834,38868546,38878426,38891830,38905635,38905861,38908726,38915073,38922893,38929333,38931612,38932374,38935790,38941021,38945739	Gene ID= ENSG00000197712.11 TPM= 29.19 Transcript Type= protein_coding
chr4	38923226	38927224	38923226	38927224	-	transcript1429.chr4.nnic@NA	transcript1429.chr4.nnic	NA	38923226	38927224	Gene ID= novel_gene_chr4_1430 TPM= 7.01 Transcript Type= NA
chr4	39044651	39133938	39044651	39133938	+	transcript1437.chr4.nnic@KLHL5	transcript1437.chr4.nnic	protein_coding	39044651,39075965,39081103,39081963,39086515,39096692,39103287,39107569,39113020,39115159,39126694,39133921	39045096,39076147,39081239,39082159,39086727,39096878,39103511,39107731,39113232,39115330,39126857,39133938	Gene ID= ENSG00000109790.16 TPM= 8.17 Transcript Type= NA
chr4	39044803	39122209	39044803	39122209	+	transcript1448.chr4.nnic@KLHL5	transcript1448.chr4.nnic	protein_coding	39044803,39062747,39075965,39081103,39081963,39086515,39096692,39103287,39107569,39113020,39115159,39121010	39045096,39063035,39076147,39081239,39082159,39086727,39096878,39103511,39107731,39113232,39115330,39122209	Gene ID= ENSG00000109790.16 TPM= 7.01 Transcript Type= NA
chr4	39046038	39047603	39046038	39047603	-	transcript1468.chr4.nnic@NA	transcript1468.chr4.nnic	NA	39046038	39047603	Gene ID= novel_gene_chr4_1469 TPM= 2.34 Transcript Type= NA
chr4	39308985	39366384	39308985	39366384	-	transcript1485.chr4.nic@RFC1	transcript1485.chr4.nic	protein_coding	39366239,39351348,39345401,39342345,39327524,39326563,39323340,39321287,39320383,39316915,39312752,39311445,39308985	39366384,39351476,39345476,39342467,39327756,39326640,39323417,39321374,39320669,39317022,39312931,39311549,39309032	Gene ID= ENSG00000035928.15 TPM= 3.5 Transcript Type= NA
chr4	39287456	39366375	39287456	39366375	-	ENST00000381897.5@RFC1	ENST00000381897.5	protein_coding	39366239,39351348,39345401,39342345,39327524,39326563,39323340,39321287,39320383,39316915,39312752,39311445,39308636,39306592,39304814,39303060,39302737,39302500,39302278,39300260,39300021,39295614,39291639,39289848,39287456	39366375,39351476,39345476,39342467,39327756,39326640,39323417,39321374,39320669,39317022,39312931,39311549,39309032,39306704,39304928,39303151,39302874,39302595,39302376,39300414,39300138,39295759,39291852,39290039,39288844	Gene ID= ENSG00000035928.15 TPM= 29.19 Transcript Type= protein_coding
chr4	39287456	39366351	39287456	39366351	-	ENST00000349703.6@RFC1	ENST00000349703.6	protein_coding	39366239,39351348,39345401,39342345,39327524,39326563,39323340,39321287,39320383,39316915,39312752,39311445,39308636,39306592,39304814,39303060,39302737,39302500,39302278,39300260,39300021,39295614,39291639,39289848,39287456	39366351,39351476,39345476,39342467,39327756,39326640,39323417,39321374,39320669,39317022,39312931,39311549,39309032,39306701,39304928,39303151,39302874,39302595,39302376,39300414,39300138,39295759,39291852,39290039,39288844	Gene ID= ENSG00000035928.15 TPM= 14.01 Transcript Type= protein_coding
chr4	39406853	39451536	39406853	39451536	+	ENST00000257408.4@KLB	ENST00000257408.4	protein_coding	39406853,39434210,39437727,39446332,39448301	39407774,39434720,39437995,39447475,39451536	Gene ID= ENSG00000134962.6 TPM= 1.17 Transcript Type= protein_coding
chr4	39454124	39458948	39454124	39458948	-	ENST00000295955.13@RPL9	ENST00000295955.13	protein_coding	39458891,39458394,39458194,39457586,39456406,39454864,39454533,39454124	39458948,39458440,39458309,39457681,39456538,39454944,39454649,39454225	Gene ID= ENSG00000163682.15 TPM= 302.21 Transcript Type= protein_coding
chr4	39454137	39458915	39454137	39458915	-	transcript1488.chr4.nic@RPL9	transcript1488.chr4.nic	protein_coding	39458891,39458394,39458194,39457586,39456406,39454864,39454533,39454137	39458915,39458598,39458309,39457681,39456538,39454944,39454649,39454225	Gene ID= ENSG00000163682.15 TPM= 32.49 Transcript Type= NA
chr4	39454137	39458888	39454137	39458888	-	ENST00000449470.6@RPL9	ENST00000449470.6	protein_coding	39458394,39458194,39457586,39456406,39454864,39454533,39454137	39458888,39458309,39457681,39456538,39454944,39454649,39454225	Gene ID= ENSG00000163682.15 TPM= 55.26 Transcript Type= protein_coding
chr4	39458587	39479506	39458587	39479506	+	ENST00000640888.1@LIAS	ENST00000640888.1	protein_coding	39458587,39460790,39462196,39463525,39465046,39465285,39467518,39470019,39471236,39473100,39477063	39459162,39460962,39462289,39463605,39465202,39465342,39467646,39470164,39471306,39473211,39479506	Gene ID= ENSG00000121897.14 TPM= 2.34 Transcript Type= protein_coding
chr4	39498755	39527618	39498755	39527618	-	ENST00000316423.10@UGDH	ENST00000316423.10	protein_coding	39527283,39521351,39514083,39510661,39510353,39509760,39508566,39505618,39505237,39504417,39503875,39498755	39527618,39521519,39514184,39510861,39510550,39509907,39508660,39505748,39505370,39504508,39503985,39500253	Gene ID= ENSG00000109814.11 TPM= 91.66 Transcript Type= protein_coding
chr4	39498763	39527437	39498763	39527437	-	ENST00000501493.6@UGDH	ENST00000501493.6	protein_coding	39527283,39521351,39514083,39510353,39509760,39508566,39505618,39505237,39504417,39503875,39498763	39527437,39521519,39514184,39510550,39509907,39508660,39505748,39505370,39504508,39503985,39500253	Gene ID= ENSG00000109814.11 TPM= 1.75 Transcript Type= protein_coding
chr4	39527709	39535580	39527709	39535580	+	transcript1532.chr4.nnic@UGDH-AS1	transcript1532.chr4.nnic	antisense_RNA	39527709,39531969,39535379	39528338,39534927,39535580	Gene ID= ENSG00000249348.1 TPM= 2.34 Transcript Type= NA
chr4	39547308	39638937	39547308	39638937	-	transcript1521.chr4.nnic@SMIM14	transcript1521.chr4.nnic	protein_coding	39638739,39605071,39572415,39556428,39551307,39547308	39638937,39605180,39572463,39556570,39552158,39548967	Gene ID= ENSG00000163683.11 TPM= 4.09 Transcript Type= NA
chr4	39546330	39639090	39546330	39639090	-	ENST00000295958.9@SMIM14	ENST00000295958.9	protein_coding	39638739,39605071,39572415,39556428,39546330	39639090,39605180,39572463,39556570,39552158	Gene ID= ENSG00000163683.11 TPM= 80.56 Transcript Type= protein_coding
chr4	39698044	39782792	39698044	39782792	+	ENST00000261427.9@UBE2K	ENST00000261427.9	protein_coding	39698044,39737420,39745752,39755657,39774834,39777682,39778360	39698390,39737513,39745810,39755739,39774933,39777810,39782792	Gene ID= ENSG00000078140.13 TPM= 22.18 Transcript Type= protein_coding
chr4	39698139	39778607	39698139	39778607	+	ENST00000513231.5@UBE2K	ENST00000513231.5	protein_coding	39698139,39745752,39755657,39774834,39777682,39778360	39698390,39745810,39755739,39774933,39777810,39778607	Gene ID= ENSG00000078140.13 TPM= 1.17 Transcript Type= processed_transcript
chr4	39714552	39715320	39714552	39715320	-	transcript1547.chr4.nnic@NA	transcript1547.chr4.nnic	NA	39714552	39715320	Gene ID= novel_gene_chr4_1548 TPM= 2.34 Transcript Type= NA
chr4	39928033	39977908	39928033	39977908	-	transcript1575.chr4.nic@PDS5A	transcript1575.chr4.nic	protein_coding	39977457,39976440,39928033	39977908,39976617,39928164	Gene ID= ENSG00000121892.14 TPM= 2.34 Transcript Type= NA
chr4	40196907	40246967	40196907	40246967	+	ENST00000381799.9@RHOH	ENST00000381799.9	protein_coding	40196907,40242714,40243178	40197300,40242834,40246967	Gene ID= ENSG00000168421.12 TPM= 4.67 Transcript Type= protein_coding
chr4	40205740	40244588	40205740	40244588	+	transcript1581.chr4.nnic@RHOH	transcript1581.chr4.nnic	protein_coding	40205740,40242714,40243178	40205832,40242834,40244588	Gene ID= ENSG00000168421.12 TPM= 2.34 Transcript Type= NA
chr4	40423267	40630903	40423267	40630903	-	transcript1584.chr4.nic@RBM47	transcript1584.chr4.nic	protein_coding	40630779,40630463,40544422,40466577,40437771,40436441,40432651,40423267	40630903,40630621,40544506,40466699,40438924,40436647,40432862,40426143	Gene ID= ENSG00000163694.14 TPM= 10.77 Transcript Type= NA
chr4	40423681	40630757	40423681	40630757	-	transcript1595.chr4.nic@RBM47	transcript1595.chr4.nic	protein_coding	40630463,40544422,40466577,40437771,40436441,40432651,40423681	40630757,40544506,40466699,40438924,40436647,40432862,40426143	Gene ID= ENSG00000163694.14 TPM= 8.72 Transcript Type= NA
chr4	40423746	40630193	40423746	40630193	-	transcript1600.chr4.nic@RBM47	transcript1600.chr4.nic	protein_coding	40630108,40544422,40466577,40437771,40436441,40432651,40423746	40630193,40544506,40466699,40438924,40436647,40432862,40426143	Gene ID= ENSG00000163694.14 TPM= 4.05 Transcript Type= NA
chr4	40423267	40514758	40423267	40514758	-	ENST00000381793.6@RBM47	ENST00000381793.6	protein_coding	40514516,40466577,40437771,40436441,40432651,40423267	40514758,40466699,40438924,40436647,40432862,40426143	Gene ID= ENSG00000163694.14 TPM= 5.63 Transcript Type= protein_coding
chr4	40423681	40629864	40423681	40629864	-	transcript1608.chr4.nic@RBM47	transcript1608.chr4.nic	protein_coding	40629396,40544422,40466577,40437771,40432651,40423681	40629864,40544506,40466699,40438924,40432862,40426143	Gene ID= ENSG00000163694.14 TPM= 5.49 Transcript Type= NA
chr4	40622261	40625316	40622261	40625316	+	transcript1618.chr4.nnic@NA	transcript1618.chr4.nnic	NA	40622261	40625316	Gene ID= novel_gene_chr4_1619 TPM= 8.17 Transcript Type= NA
chr4	40749904	40754684	40749904	40754684	+	transcript1625.chr4.nic@NSUN7	transcript1625.chr4.nic	protein_coding	40749904,40750603	40750300,40754684	Gene ID= ENSG00000179299.16 TPM= 2.34 Transcript Type= NA
chr4	40815393	41214542	40815393	41214542	-	transcript1638.chr4.nnic@APBB2	transcript1638.chr4.nnic	protein_coding	41214405,41201038,41100639,41033236,41013583,40944865,40935077,40934614,40934456,40893265,40890364,40830463,40827132,40825887,40823644,40821871,40815393	41214542,41201161,41100750,41033304,41014398,40945073,40935139,40934699,40934516,40893411,40890491,40830577,40827219,40825970,40823759,40822050,40816259	Gene ID= ENSG00000163697.16 TPM= 2.34 Transcript Type= NA
chr4	40812779	41051079	40812779	41051079	-	transcript1642.chr4.nnic@APBB2	transcript1642.chr4.nnic	protein_coding	41050913,41033236,41013583,40944865,40935077,40934614,40934456,40893265,40890364,40830463,40827132,40825887,40823644,40821871,40812779	41051079,41033304,41014398,40945073,40935139,40934699,40934516,40893411,40890491,40830577,40827219,40825970,40823759,40822050,40816259	Gene ID= ENSG00000163697.16 TPM= 9.34 Transcript Type= NA
chr4	40815324	41214532	40815324	41214532	-	ENST00000508593.5@APBB2	ENST00000508593.5	protein_coding	41214405,41142987,41100639,41065576,41033236,41013583,40944865,40935077,40934614,40934456,40893265,40890364,40830463,40827132,40825887,40823644,40821871,40815324	41214532,41143142,41100750,41065673,41033304,41014398,40945073,40935139,40934699,40934516,40893411,40890491,40830577,40827219,40825970,40823759,40822050,40816259	Gene ID= ENSG00000163697.16 TPM= 2.34 Transcript Type= protein_coding
chr4	41048715	41050139	41048715	41050139	+	transcript1648.chr4.nnic@NA	transcript1648.chr4.nnic	NA	41048715	41050139	Gene ID= novel_gene_chr4_1649 TPM= 12.84 Transcript Type= NA
chr4	41256908	41268428	41256908	41268428	+	ENST00000381760.8@UCHL1	ENST00000381760.8	protein_coding	41256908,41257115,41260647,41261715,41261876,41263225,41264103,41267987	41257009,41257737,41260797,41261800,41261923,41263291,41264161,41268428	Gene ID= ENSG00000154277.12 TPM= 2.34 Transcript Type= retained_intron
chr4	41359559	41699003	41359559	41699003	+	transcript1664.chr4.nic@LIMCH1	transcript1664.chr4.nic	protein_coding	41359559,41494536,41524409,41598920,41603875,41605894,41613466,41619188,41638932,41644500,41646123,41646485,41650393,41661420,41662821,41666561,41670718,41671554,41676382,41680006,41680955,41682333,41684397,41685710,41689527,41692282,41697160	41359803,41494606,41524478,41599026,41603905,41606004,41613661,41619440,41638967,41644626,41646280,41646893,41650608,41661510,41662984,41666666,41670792,41671594,41676462,41680098,41681059,41682460,41684518,41685830,41689635,41692384,41699003	Gene ID= ENSG00000064042.17 TPM= 12.06 Transcript Type= NA
chr4	41359559	41700044	41359559	41700044	+	transcript1677.chr4.nic@LIMCH1	transcript1677.chr4.nic	protein_coding	41359559,41494536,41524409,41598920,41603875,41605894,41613466,41619188,41638932,41644500,41646123,41646485,41650393,41661420,41662821,41666561,41671554,41676382,41680006,41680955,41682333,41684397,41685710,41689527,41692282,41697160	41359803,41494606,41524478,41599026,41603905,41606004,41613661,41619440,41638967,41644626,41646280,41646893,41650608,41661510,41662984,41666666,41671594,41676462,41680098,41681059,41682460,41684518,41685830,41689635,41692384,41700044	Gene ID= ENSG00000064042.17 TPM= 21.9 Transcript Type= NA
chr4	41360615	41699003	41360615	41699003	+	transcript1703.chr4.nic@LIMCH1	transcript1703.chr4.nic	protein_coding	41360615,41494536,41524409,41598920,41603875,41605894,41613466,41619188,41644500,41646123,41646485,41650393,41661420,41662821,41666561,41671554,41676382,41680006,41680955,41682333,41684397,41685710,41689527,41692282,41697160	41360936,41494606,41524478,41599026,41603905,41606004,41613661,41619440,41644626,41646280,41646893,41650608,41661510,41662984,41666666,41671594,41676462,41680098,41681059,41682460,41684518,41685830,41689635,41692384,41699003	Gene ID= ENSG00000064042.17 TPM= 12.73 Transcript Type= NA
chr4	41359607	41699003	41359607	41699003	+	ENST00000513024.5@LIMCH1	ENST00000513024.5	protein_coding	41359607,41494536,41524409,41598920,41603875,41605894,41613466,41619188,41644500,41646123,41646485,41650393,41661420,41662821,41666561,41670718,41671554,41676382,41680006,41680955,41682333,41684397,41685710,41689527,41692282,41697160	41359803,41494606,41524478,41599026,41603905,41606004,41613661,41619440,41644626,41646280,41646893,41650608,41661510,41662984,41666666,41670792,41671594,41676462,41680098,41681059,41682460,41684518,41685830,41689635,41692384,41699003	Gene ID= ENSG00000064042.17 TPM= 8 Transcript Type= protein_coding
chr4	41360815	41699020	41360815	41699020	+	ENST00000512820.5@LIMCH1	ENST00000512820.5	protein_coding	41360815,41494536,41524409,41598920,41603875,41605894,41613466,41619188,41644500,41646123,41646485,41650393,41661420,41662821,41666561,41670718,41671554,41676382,41680006,41680955,41682333,41684397,41685710,41689527,41692282,41697160	41360936,41494606,41524478,41599026,41603905,41606004,41613661,41619440,41644626,41646280,41646893,41650608,41661510,41662984,41666666,41670792,41671594,41676462,41680098,41681059,41682460,41684518,41685830,41689635,41692384,41699020	Gene ID= ENSG00000064042.17 TPM= 5.59 Transcript Type= protein_coding
chr4	41360785	41699012	41360785	41699012	+	ENST00000512946.5@LIMCH1	ENST00000512946.5	protein_coding	41360785,41494536,41524409,41598920,41603875,41605894,41613466,41619188,41638932,41644500,41646123,41646485,41650393,41661420,41662821,41666561,41671554,41676379,41680006,41680955,41682333,41684397,41685710,41689527,41692282,41697160	41360936,41494606,41524478,41599026,41603905,41606004,41613661,41619440,41638967,41644626,41646280,41646893,41650608,41661510,41662984,41666666,41671594,41676462,41680098,41681059,41682460,41684518,41685830,41689635,41692384,41699012	Gene ID= ENSG00000064042.17 TPM= 4.88 Transcript Type= protein_coding
chr4	41935120	41960572	41935120	41960572	+	ENST00000504986.5@TMEM33	ENST00000504986.5	protein_coding	41935120,41938602,41939196,41943747,41944793,41949302,41954070	41935529,41938696,41939383,41943814,41944926,41949385,41960572	Gene ID= ENSG00000109133.12 TPM= 51.37 Transcript Type= protein_coding
chr4	41990512	42087521	41990512	42087521	+	transcript1756.chr4.nnic@SLC30A9	transcript1756.chr4.nnic	protein_coding	41990512,41990734,42001616,42018111,42020416,42022838,42023302,42035275,42038986,42049377,42060191,42062986,42065310,42066550,42067085,42070526,42075657,42078212,42086082	41990658,41990760,42001780,42018170,42020515,42022930,42023384,42035333,42039053,42049479,42060246,42063121,42065349,42066621,42067192,42070691,42075786,42078325,42087521	Gene ID= ENSG00000014824.13 TPM= 5.06 Transcript Type= NA
chr4	41990472	42090457	41990472	42090457	+	ENST00000264451.11@SLC30A9	ENST00000264451.11	protein_coding	41990472,42001616,42018111,42020416,42022838,42023302,42035275,42038986,42049377,42060191,42062986,42065310,42066550,42067085,42070526,42075657,42078212,42086082	41990760,42001780,42018170,42020515,42022930,42023384,42035333,42039053,42049479,42060246,42063121,42065349,42066621,42067192,42070691,42075786,42078325,42090457	Gene ID= ENSG00000014824.13 TPM= 109.75 Transcript Type= protein_coding
chr4	41990496	42078909	41990496	42078909	+	transcript1760.chr4.nic@SLC30A9	transcript1760.chr4.nic	protein_coding	41990496,42001616,42018111,42020416,42022838,42023302,42035275,42038986,42049377,42060191,42062986,42065310,42066550,42067085,42070526,42075657,42078212	41990760,42001780,42018170,42020515,42022930,42023384,42035333,42039053,42049479,42060246,42063121,42065349,42066621,42067192,42070691,42075786,42078909	Gene ID= ENSG00000014824.13 TPM= 7.01 Transcript Type= NA
chr4	41990496	42087521	41990496	42087521	+	transcript1764.chr4.nnic@SLC30A9	transcript1764.chr4.nnic	protein_coding	41990496,42001616,42018111,42020416,42022838,42023302,42038986,42049377,42060191,42062986,42065310,42066550,42067085,42070526,42075657,42078212,42086082	41990760,42001780,42018170,42020515,42022930,42023384,42039053,42049479,42060246,42063121,42065349,42066621,42067192,42070691,42075786,42078325,42087521	Gene ID= ENSG00000014824.13 TPM= 3.89 Transcript Type= NA
chr4	42408377	42657093	42408377	42657093	-	ENST00000264449.14@ATP8A1	ENST00000264449.14	protein_coding	42656825,42626995,42625614,42624536,42616033,42600478,42594289,42588260,42586349,42581621,42579813,42578260,42575622,42574619,42555968,42552505,42551198,42549013,42543917,42524763,42522160,42507016,42503450,42485496,42464893,42464690,42455525,42455297,42451981,42446583,42444578,42443565,42423617,42422807,42414627,42408377	42657093,42627109,42625713,42624634,42616078,42600518,42594362,42588329,42586476,42581732,42579978,42578387,42575699,42574707,42556040,42552610,42551280,42549062,42543986,42524847,42522299,42507154,42503514,42485668,42465076,42464800,42455599,42455419,42452059,42446644,42444634,42443672,42423705,42422899,42414718,42413013	Gene ID= ENSG00000124406.16 TPM= 29.19 Transcript Type= protein_coding
chr4	44678429	44700926	44678429	44700926	+	ENST00000281543.5@GUF1	ENST00000281543.5	protein_coding	44678429,44680441,44680694,44681123,44682334,44683235,44685959,44686510,44688007,44689286,44689843,44690717,44691666,44694412,44695615,44697408,44698544	44678787,44680552,44680842,44681203,44682411,44683318,44686023,44686713,44688146,44689409,44689975,44690860,44691799,44694513,44695734,44697444,44700926	Gene ID= ENSG00000151806.13 TPM= 2.34 Transcript Type= protein_coding
chr4	44678427	44700759	44678427	44700759	+	ENST00000506793.5@GUF1	ENST00000506793.5	protein_coding	44678427,44680694,44681123,44682334,44683235,44685959,44686510,44688007,44689286,44689843,44690717,44691666,44694412,44695615,44697408,44698544	44678585,44680842,44681203,44682411,44683318,44686023,44686713,44688146,44689409,44689975,44690860,44691799,44694513,44695734,44697444,44700759	Gene ID= ENSG00000151806.13 TPM= 1.17 Transcript Type= processed_transcript
chr4	44702139	44726595	44702139	44726595	-	ENST00000295448.7@GNPDA2	ENST00000295448.7	protein_coding	44726474,44722084,44718309,44717113,44710953,44707752,44702139	44726595,44722242,44718410,44717295,44711137,44707926,44703142	Gene ID= ENSG00000163281.11 TPM= 3.5 Transcript Type= protein_coding
chr4	47450796	47463719	47450796	47463719	-	ENST00000381571.5@COMMD8	ENST00000381571.5	protein_coding	47463586,47460144,47456577,47453059,47450796	47463719,47460299,47456729,47453214,47451665	Gene ID= ENSG00000169019.10 TPM= 5.84 Transcript Type= protein_coding
chr4	47485239	47592891	47485239	47592891	+	transcript1813.chr4.nic@ATP10D	transcript1813.chr4.nic	protein_coding	47485239,47512504,47515476,47523012,47525557,47535509,47535902,47536437,47536731,47546624,47554726,47557664,47558923,47560949,47563581,47568837,47572154,47572872,47576773,47580398,47581960,47587019,47591042	47485519,47512830,47515670,47523216,47525642,47535615,47536033,47536564,47536938,47546862,47554914,47558273,47559029,47561075,47563765,47569146,47572230,47572997,47576973,47580478,47582064,47587206,47592891	Gene ID= ENSG00000145246.13 TPM= 4.09 Transcript Type= NA
chr4	47485239	47592891	47485239	47592891	+	transcript1814.chr4.nnic@ATP10D	transcript1814.chr4.nnic	protein_coding	47485239,47512504,47523012,47525557,47535509,47535902,47536437,47536686,47546624,47554726,47557664,47558923,47560949,47563581,47568837,47572154,47572872,47576773,47580398,47581960,47587019,47591042	47485519,47512830,47523216,47525642,47535615,47536033,47536564,47536938,47546862,47554914,47558273,47559029,47561075,47563765,47569146,47572230,47572997,47576973,47580478,47582064,47587206,47592891	Gene ID= ENSG00000145246.13 TPM= 2.92 Transcript Type= NA
chr4	47847243	47914539	47847243	47914539	-	ENST00000507489.1@NFXL1	ENST00000507489.1	protein_coding	47914365,47913969,47910824,47905237,47903193,47899370,47898959,47898757,47897967,47896523,47894180,47890613,47885879,47885498,47884346,47879096,47878525,47875127,47862846,47855059,47851856,47851095,47847243	47914539,47914205,47910994,47905346,47903323,47899548,47899120,47898857,47898081,47896647,47894302,47890703,47885999,47885657,47884437,47879117,47878665,47875293,47862915,47855163,47851942,47851148,47848336	Gene ID= ENSG00000170448.11 TPM= 3.5 Transcript Type= protein_coding
chr4	47847240	47914616	47847240	47914616	-	ENST00000381538.7@NFXL1	ENST00000381538.7	protein_coding	47914550,47913969,47910824,47905237,47903193,47899370,47898959,47898757,47897967,47896523,47894180,47890613,47885879,47885498,47884346,47879096,47878525,47875127,47862846,47855059,47851856,47851095,47847240	47914616,47914205,47910994,47905346,47903323,47899548,47899120,47898857,47898081,47896647,47894302,47890703,47885999,47885657,47884437,47879117,47878665,47875293,47862915,47855163,47851942,47851148,47848336	Gene ID= ENSG00000170448.11 TPM= 4.29 Transcript Type= protein_coding
chr4	47847233	47914667	47847233	47914667	-	ENST00000329043.7@NFXL1	ENST00000329043.7	protein_coding	47914613,47913969,47910824,47905237,47903193,47899370,47898959,47898757,47897967,47896523,47894180,47890613,47885879,47885498,47884346,47879096,47878525,47875127,47862846,47855059,47851856,47851095,47847233	47914667,47914205,47910994,47905346,47903323,47899548,47899120,47898857,47898081,47896647,47894302,47890703,47885999,47885657,47884437,47879117,47878665,47875293,47862915,47855163,47851942,47851148,47848336	Gene ID= ENSG00000170448.11 TPM= 1.95 Transcript Type= protein_coding
chr4	47847240	47914557	47847240	47914557	-	transcript1824.chr4.nic@NFXL1	transcript1824.chr4.nic	protein_coding	47913969,47910824,47905237,47903193,47899370,47898959,47898757,47897967,47896523,47894180,47890613,47885879,47885498,47884346,47879096,47878525,47875127,47862846,47855059,47851856,47851095,47847240	47914557,47910994,47905346,47903323,47899548,47899120,47898857,47898081,47896647,47894302,47890703,47885999,47885657,47884437,47879117,47878665,47875293,47862915,47855163,47851942,47851148,47848336	Gene ID= ENSG00000170448.11 TPM= 5.45 Transcript Type= NA
chr4	48016774	48040173	48016774	48040173	+	ENST00000295461.9@NIPAL1	ENST00000295461.9	protein_coding	48016774,48025068,48030120,48032993,48034881,48035562	48016885,48025334,48030176,48033083,48035041,48040173	Gene ID= ENSG00000163293.11 TPM= 3.5 Transcript Type= protein_coding
chr4	48135783	48269864	48135783	48269864	-	ENST00000381501.7@TEC	ENST00000381501.7	protein_coding	48269752,48228477,48176082,48171368,48170248,48168586,48167778,48163702,48156680,48150863,48149557,48146325,48145408,48145079,48141355,48138904,48138665,48135783	48269864,48228659,48176186,48171449,48170376,48168626,48167953,48163767,48156734,48150942,48149690,48146399,48145579,48145295,48141419,48139022,48138822,48137499	Gene ID= ENSG00000135605.12 TPM= 2.34 Transcript Type= protein_coding
chr4	48341322	48426212	48341322	48426212	+	ENST00000264313.10@SLAIN2	ENST00000264313.10	protein_coding	48341322,48369849,48377896,48379690,48382568,48383647,48420125,48422011	48342128,48369997,48378060,48379848,48382927,48383784,48420443,48426212	Gene ID= ENSG00000109171.14 TPM= 33.08 Transcript Type= protein_coding
chr4	48483343	48489196	48483343	48489196	+	ENST00000273861.4@SLC10A4	ENST00000273861.4	protein_coding	48483343,48484932,48488427	48484151,48485142,48489196	Gene ID= ENSG00000145248.6 TPM= 8.17 Transcript Type= protein_coding
chr4	48776154	48780312	48776154	48780312	-	transcript1868.chr4.nnic@NA	transcript1868.chr4.nnic	NA	48776154	48780312	Gene ID= novel_gene_chr4_1869 TPM= 3.5 Transcript Type= NA
chr4	48831030	48861200	48831030	48861200	+	transcript1872.chr4.nic@OCIAD1	transcript1872.chr4.nic	protein_coding	48831030,48832620,48833401,48842636,48848399,48849947,48851806,48857213,48860725	48831052,48832682,48833481,48842689,48848446,48850082,48851975,48857365,48861200	Gene ID= ENSG00000109180.14 TPM= 3.5 Transcript Type= NA
chr4	48831065	48861248	48831065	48861248	+	ENST00000264312.11@OCIAD1	ENST00000264312.11	protein_coding	48831065,48832620,48833401,48842636,48848399,48849947,48851806,48857213,48860725	48831249,48832682,48833481,48842689,48848446,48850082,48851975,48857365,48861248	Gene ID= ENSG00000109180.14 TPM= 55.46 Transcript Type= protein_coding
chr4	48831065	48861248	48831065	48861248	+	ENST00000396448.6@OCIAD1	ENST00000396448.6	protein_coding	48831065,48832620,48833401,48842636,48848399,48849947,48851806,48860725	48831249,48832682,48833481,48842689,48848446,48850082,48852020,48861248	Gene ID= ENSG00000109180.14 TPM= 4.09 Transcript Type= protein_coding
chr4	48831116	48861200	48831116	48861200	+	transcript1882.chr4.nic@OCIAD1	transcript1882.chr4.nic	protein_coding	48831116,48833401,48842636,48848399,48849947,48851806,48857213,48860725	48832682,48833481,48842689,48848446,48850082,48851975,48857365,48861200	Gene ID= ENSG00000109180.14 TPM= 3.5 Transcript Type= NA
chr4	48857953	48861246	48857953	48861246	+	transcript1883.chr4.nnic@NA	transcript1883.chr4.nnic	NA	48857953	48861246	Gene ID= novel_gene_chr4_1884 TPM= 3.5 Transcript Type= NA
chr4	48885019	48906828	48885019	48906828	-	ENST00000508632.5@OCIAD2	ENST00000508632.5	protein_coding	48906658,48904484,48899829,48897804,48894006,48892772,48885019	48906828,48904611,48899925,48897857,48894053,48892889,48885565	Gene ID= ENSG00000145247.11 TPM= 40.87 Transcript Type= protein_coding
chr4	48885382	48906937	48885382	48906937	-	ENST00000508069.6@OCIAD2	ENST00000508069.6	protein_coding	48906658,48904484,48897804,48894006,48892772,48885382	48906937,48904611,48897857,48894053,48892889,48885565	Gene ID= ENSG00000145247.11 TPM= 4.67 Transcript Type= processed_transcript
chr4	51843181	51914806	51843181	51914806	+	transcript1901.chr4.nic@DCUN1D4	transcript1901.chr4.nic	protein_coding	51843181,51863437,51863670,51874271,51877763,51886568,51891760,51899270,51911070,51913290,51913529	51843267,51863507,51863709,51874385,51877854,51887244,51891851,51899378,51911174,51913392,51914806	Gene ID= ENSG00000109184.14 TPM= 2.34 Transcript Type= NA
chr4	52020706	52038285	52020706	52038285	-	transcript1919.chr4.nnic@SGCB	transcript1919.chr4.nnic	protein_coding	52038227,52029678,52028730,52027968,52020706	52038285,52029863,52028921,52028099,52024160	Gene ID= ENSG00000163069.12 TPM= 15.18 Transcript Type= NA
chr4	52051311	52097292	52051311	52097292	+	transcript1929.chr4.nic@SPATA18	transcript1929.chr4.nic	protein_coding	52051311,52060419,52060782,52071917,52076779,52078735,52079744,52082387,52084916,52094527,52094880	52051791,52060524,52060897,52072156,52077040,52078893,52079919,52082510,52084999,52094572,52097292	Gene ID= ENSG00000163071.10 TPM= 7.01 Transcript Type= NA
chr4	52712404	52714137	52712404	52714137	+	ENST00000411630.6@DANCR	ENST00000411630.6	processed_transcript	52712404,52712824,52713494	52712527,52712959,52714137	Gene ID= ENSG00000226950.6 TPM= 52.54 Transcript Type= lincRNA
chr4	52742552	52751640	52742552	52751640	-	ENST00000443173.5@ERVMER34-1	ENST00000443173.5	protein_coding	52751343,52750930,52742552	52751640,52751069,52745943	Gene ID= ENSG00000226887.7 TPM= 1.17 Transcript Type= protein_coding
chr4	53377637	53459621	53377637	53459621	+	transcript1948.chr4.nic@FIP1L1	transcript1948.chr4.nic	protein_coding	53377637,53379073,53379225,53382278,53383773,53389809,53390521,53391009,53391430,53399730,53425872,53428027,53440582,53442653,53444048,53452920,53458653,53459302	53377923,53379117,53379264,53382335,53383876,53389873,53390628,53391139,53391498,53399839,53425965,53428183,53440608,53442707,53444103,53453133,53458790,53459621	Gene ID= ENSG00000145216.15 TPM= 2.53 Transcript Type= NA
chr4	53377578	53459621	53377578	53459621	+	transcript1950.chr4.nic@FIP1L1	transcript1950.chr4.nic	protein_coding	53377578,53379073,53379225,53382278,53383773,53389809,53390521,53391009,53399730,53414615,53425872,53428027,53440582,53442653,53444048,53452920,53458653,53459302	53377923,53379117,53379264,53382335,53383876,53389873,53390628,53391139,53399839,53414722,53425965,53428183,53440608,53442707,53444103,53453133,53458790,53459621	Gene ID= ENSG00000145216.15 TPM= 3.7 Transcript Type= NA
chr4	53377656	53459621	53377656	53459621	+	transcript1957.chr4.nic@FIP1L1	transcript1957.chr4.nic	protein_coding	53377656,53379073,53379225,53382278,53383773,53389809,53390521,53391009,53399730,53425872,53428027,53440582,53442653,53444048,53452920,53458653,53459302	53377923,53379117,53379264,53382335,53383876,53389873,53390628,53391139,53399839,53425965,53428183,53440608,53442707,53444103,53453133,53458790,53459621	Gene ID= ENSG00000145216.15 TPM= 2.53 Transcript Type= NA
chr4	53377641	53459668	53377641	53459668	+	transcript1963.chr4.nic@FIP1L1	transcript1963.chr4.nic	protein_coding	53377641,53379225,53382278,53383773,53389809,53390521,53391009,53399730,53414615,53425872,53428027,53440582,53442653,53444048,53452920,53458653,53459302	53377923,53379264,53382335,53383876,53389873,53390628,53391139,53399839,53414722,53425965,53428183,53440608,53442707,53444103,53453133,53458790,53459668	Gene ID= ENSG00000145216.15 TPM= 2.53 Transcript Type= NA
chr4	53377641	53462690	53377641	53462690	+	transcript1969.chr4.nic@FIP1L1	transcript1969.chr4.nic	protein_coding	53377641,53379225,53382278,53383773,53389809,53390521,53391009,53399730,53414615,53425872,53428027,53442653,53444048,53452920,53458653,53459302	53377923,53379264,53382335,53383876,53389873,53390628,53391139,53399839,53414722,53425965,53428183,53442707,53444103,53453133,53458790,53462690	Gene ID= ENSG00000145216.15 TPM= 2.34 Transcript Type= NA
chr4	53377641	53459621	53377641	53459621	+	transcript1970.chr4.nic@FIP1L1	transcript1970.chr4.nic	protein_coding	53377641,53379225,53382278,53383773,53389809,53390521,53391009,53399730,53425872,53428027,53440582,53442653,53444048,53452920,53458653,53459302	53377923,53379264,53382335,53383876,53389873,53390628,53391139,53399839,53425965,53428183,53440608,53442707,53444103,53453133,53458790,53459621	Gene ID= ENSG00000145216.15 TPM= 2.53 Transcript Type= NA
chr4	53377645	53459668	53377645	53459668	+	ENST00000337488.10@FIP1L1	ENST00000337488.10	protein_coding	53377645,53379073,53379225,53382278,53383773,53389809,53390521,53391009,53391430,53399730,53414615,53425872,53428027,53442653,53444048,53452920,53458653,53459302	53377923,53379117,53379264,53382335,53383876,53389873,53390628,53391139,53391498,53399839,53414722,53425965,53428183,53442707,53444103,53453133,53458790,53459668	Gene ID= ENSG00000145216.15 TPM= 1.17 Transcript Type= protein_coding
chr4	53460456	53652477	53460456	53652477	-	transcript1979.chr4.nic@LNX1	transcript1979.chr4.nic	protein_coding	53652168,53591388,53573623,53507986,53507317,53498641,53496023,53481720,53478565,53476753,53461435,53460456	53652477,53591515,53574088,53508227,53507469,53498843,53496394,53481854,53478742,53476981,53461593,53461042	Gene ID= ENSG00000072201.13 TPM= 7.01 Transcript Type= NA
chr4	54009789	54064690	54009789	54064690	-	ENST00000263921.7@CHIC2	ENST00000263921.7	protein_coding	54064182,54049251,54048955,54014063,54013837,54009789	54064690,54049305,54049110,54014119,54013896,54010145	Gene ID= ENSG00000109220.10 TPM= 24.52 Transcript Type= protein_coding
chr4	54229243	54298247	54229243	54298247	+	transcript1990.chr4.nic@PDGFRA	transcript1990.chr4.nic	protein_coding	54229243,54240038,54258757,54261095,54263667,54264919,54267289,54267552,54270633,54272394,54273537,54274531,54274841,54277388,54277896,54278362,54280316,54285371,54285841,54287430,54288799,54289009,54290313,54295125	54229415,54240115,54258817,54261412,54263927,54265049,54267460,54267741,54270748,54272520,54273730,54274625,54274973,54277492,54278006,54278515,54280482,54285486,54285963,54287541,54288898,54289114,54290554,54298247	Gene ID= ENSG00000134853.11 TPM= 17.51 Transcript Type= NA
chr4	54229097	54298247	54229097	54298247	+	ENST00000257290.9@PDGFRA	ENST00000257290.9	protein_coding	54229097,54258757,54261095,54263667,54264919,54267289,54267552,54270633,54272394,54273537,54274531,54274841,54277388,54277896,54278362,54280316,54285371,54285841,54287430,54288799,54289009,54290313,54295125	54229415,54258817,54261412,54263927,54265049,54267460,54267741,54270748,54272520,54273730,54274625,54274973,54277492,54278006,54278515,54280482,54285486,54285963,54287541,54288898,54289114,54290554,54298247	Gene ID= ENSG00000134853.11 TPM= 40.87 Transcript Type= protein_coding
chr4	54657918	54740715	54657918	54740715	+	ENST00000288135.5@KIT	ENST00000288135.5	protein_coding	54657918,54695512,54698284,54699630,54703724,54707098,54709424,54723584,54725857,54727218,54727416,54727823,54728011,54729335,54731328,54731871,54733070,54736498,54736721,54737175,54738429	54658081,54695781,54698565,54699766,54703892,54707287,54709539,54723698,54726050,54727324,54727542,54727927,54728121,54729485,54731419,54731998,54733192,54736609,54736820,54737280,54740715	Gene ID= ENSG00000157404.15 TPM= 71.22 Transcript Type= protein_coding
chr4	55078477	55125589	55078477	55125589	-	ENST00000263923.4@KDR	ENST00000263923.4	protein_coding	55125227,55121097,55118604,55115281,55114874,55114126,55113304,55110654,55110403,55107737,55106687,55105832,55104643,55102362,55101897,55098697,55098137,55097662,55096229,55095577,55094802,55092617,55089956,55089691,55089374,55088868,55087607,55082536,55081956,55078477	55125589,55121190,55118800,55115411,55115042,55114265,55113481,55110768,55110566,55107893,55106810,55105940,55104984,55102508,55102028,55098803,55098272,55097766,55096342,55095665,55094955,55092714,55090078,55089802,55089473,55088973,55087758,55082635,55082041,55080163	Gene ID= ENSG00000128052.8 TPM= 25.69 Transcript Type= protein_coding
chr4	55346247	55370308	55346247	55370308	+	transcript2021.chr4.nnic@SRD5A3	transcript2021.chr4.nnic	protein_coding	55346247,55351097,55359346,55364074,55367588,55369832	55346557,55351214,55359488,55364271,55367722,55370308	Gene ID= ENSG00000128039.10 TPM= 2.34 Transcript Type= NA
chr4	55346109	55373096	55346109	55373096	+	ENST00000264228.8@SRD5A3	ENST00000264228.8	protein_coding	55346109,55359346,55364074,55367588,55369832	55346557,55359488,55364271,55367722,55373096	Gene ID= ENSG00000128039.10 TPM= 24.52 Transcript Type= protein_coding
chr4	55395919	55452972	55395919	55452972	+	transcript2025.chr4.nic@TMEM165	transcript2025.chr4.nic	protein_coding	55395919,55411614,55417072,55417803,55424538,55452239	55396396,55411839,55417247,55417985,55424643,55452972	Gene ID= ENSG00000134851.12 TPM= 5.84 Transcript Type= NA
chr4	55395957	55426172	55395957	55426172	+	ENST00000381334.9@TMEM165	ENST00000381334.9	protein_coding	55395957,55411614,55417072,55417803,55424538,55425376	55396396,55411839,55417247,55417985,55424643,55426172	Gene ID= ENSG00000134851.12 TPM= 191.49 Transcript Type= protein_coding
chr4	55395923	55398886	55395923	55398886	+	transcript2043.chr4.nnic@NA	transcript2043.chr4.nnic	NA	55395923	55398886	Gene ID= novel_gene_chr4_2044 TPM= 5.84 Transcript Type= NA
chr4	55397912	55401257	55397912	55401257	-	transcript2047.chr4.nnic@NA	transcript2047.chr4.nnic	NA	55397912	55401257	Gene ID= novel_gene_chr4_2048 TPM= 2.34 Transcript Type= NA
chr4	55402797	55405631	55402797	55405631	-	transcript2045.chr4.nnic@NA	transcript2045.chr4.nnic	NA	55402797	55405631	Gene ID= novel_gene_chr4_2046 TPM= 7.01 Transcript Type= NA
chr4	55412379	55412711	55412379	55412711	-	transcript2051.chr4.nnic@NA	transcript2051.chr4.nnic	NA	55412379	55412711	Gene ID= novel_gene_chr4_2052 TPM= 2.34 Transcript Type= NA
chr4	55853646	55905013	55853646	55905013	+	transcript2054.chr4.nnic@EXOC1	transcript2054.chr4.nnic	protein_coding	55853646,55858314,55860411,55864227,55868336,55870678,55871101,55871849,55872755,55877917,55883823,55890223,55891315,55892635,55893552,55896717,55899685,55902344,55904343	55853953,55858447,55860541,55864386,55868523,55870905,55871233,55871958,55872808,55878066,55883928,55890386,55891422,55892711,55893780,55896900,55899884,55902538,55905013	Gene ID= ENSG00000090989.17 TPM= 7.01 Transcript Type= NA
chr4	55853616	55905013	55853616	55905013	+	ENST00000381295.6@EXOC1	ENST00000381295.6	protein_coding	55853616,55858314,55860411,55864227,55868336,55870678,55871101,55871849,55877917,55883823,55888888,55890223,55891315,55892635,55893552,55896717,55899685,55902344,55904343	55853953,55858447,55860541,55864386,55868523,55870905,55871233,55871958,55878066,55883928,55888932,55890386,55891422,55892711,55893780,55896900,55899884,55902538,55905013	Gene ID= ENSG00000090989.17 TPM= 3.5 Transcript Type= protein_coding
chr4	55853648	55905013	55853648	55905013	+	transcript2057.chr4.nnic@EXOC1	transcript2057.chr4.nnic	protein_coding	55853648,55858314,55860411,55864227,55868336,55870678,55871101,55871849,55872755,55877917,55883823,55890223,55891315,55892635,55893552,55896717,55899685,55902344,55904343	55853797,55858447,55860541,55864386,55868523,55870905,55871233,55871958,55872808,55878066,55883928,55890386,55891422,55892711,55893780,55896900,55899884,55902538,55905013	Gene ID= ENSG00000090989.17 TPM= 5.84 Transcript Type= NA
chr4	55853646	55905013	55853646	55905013	+	transcript2060.chr4.nic@EXOC1	transcript2060.chr4.nic	protein_coding	55853646,55858314,55860411,55864227,55868336,55870678,55871101,55871849,55877917,55883823,55890223,55891315,55892635,55893552,55896717,55899685,55902344,55904343	55853953,55858447,55860541,55864386,55868523,55870905,55871233,55871958,55878066,55883928,55890386,55891422,55892711,55893780,55896900,55899884,55902538,55905013	Gene ID= ENSG00000090989.17 TPM= 45.54 Transcript Type= NA
chr4	55853675	55905034	55853675	55905034	+	ENST00000346134.11@EXOC1	ENST00000346134.11	protein_coding	55853675,55858314,55860411,55864227,55868336,55870678,55871101,55871849,55877917,55883823,55888888,55890223,55891315,55892635,55893552,55896717,55899685,55902344,55904343	55853797,55858447,55860541,55864386,55868523,55870905,55871233,55871958,55878066,55883928,55888932,55890386,55891422,55892711,55893780,55896900,55899884,55902538,55905034	Gene ID= ENSG00000090989.17 TPM= 1.75 Transcript Type= protein_coding
chr4	55853739	55905034	55853739	55905034	+	ENST00000349598.6@EXOC1	ENST00000349598.6	protein_coding	55853739,55858314,55860411,55864227,55868336,55870678,55871101,55871849,55877917,55883823,55890223,55891315,55892635,55893552,55896717,55899685,55902344,55904343	55853797,55858447,55860541,55864386,55868523,55870905,55871233,55871958,55878066,55883928,55890386,55891422,55892711,55893780,55896900,55899884,55902538,55905034	Gene ID= ENSG00000090989.17 TPM= 4.09 Transcript Type= protein_coding
chr4	55938306	55947963	55938306	55947963	.	transcript2078.chr4.nnic@NA	transcript2078.chr4.nnic	NA	55938306,55940517,55947840	55938955,55940632,55947963	Gene ID= novel_gene_chr4_2079 TPM= 2.34 Transcript Type= NA
chr4	56338290	56387500	56338290	56387500	-	ENST00000205214.10@AASDH	ENST00000205214.10	protein_coding	56387362,56384070,56382477,56378148,56371451,56355182,56354705,56354039,56353404,56351342,56349263,56345127,56343562,56342835,56338290	56387500,56384341,56382597,56378464,56371643,56355423,56354811,56354211,56353596,56351457,56350058,56345290,56343684,56342966,56338791	Gene ID= ENSG00000157426.13 TPM= 7.01 Transcript Type= protein_coding
chr4	56338287	56387508	56338287	56387508	-	ENST00000602986.5@AASDH	ENST00000602986.5	protein_coding	56387362,56384070,56378148,56371451,56355182,56354705,56354039,56353404,56351342,56349263,56345127,56343562,56342835,56338287	56387508,56384341,56378464,56371643,56355423,56354811,56354211,56353596,56351457,56350058,56345290,56343684,56342966,56338791	Gene ID= ENSG00000157426.13 TPM= 2.34 Transcript Type= protein_coding
chr4	56338290	56387423	56338290	56387423	-	ENST00000513376.5@AASDH	ENST00000513376.5	protein_coding	56387362,56382477,56378148,56371451,56355182,56354705,56354039,56353404,56351342,56349263,56345127,56343562,56342835,56338290	56387423,56382597,56378464,56371643,56355423,56354811,56354211,56353596,56351457,56350058,56345290,56343684,56342966,56338791	Gene ID= ENSG00000157426.13 TPM= 2.34 Transcript Type= protein_coding
chr4	56393362	56435615	56393362	56435615	-	ENST00000264220.6@PPAT	ENST00000264220.6	protein_coding	56435350,56407650,56406495,56403289,56403040,56402109,56401330,56400784,56399179,56396619,56393362	56435615,56407716,56406701,56403401,56403185,56402181,56401481,56400911,56399400,56396739,56395548	Gene ID= ENSG00000128059.8 TPM= 7.01 Transcript Type= protein_coding
chr4	56436138	56461361	56436138	56461361	+	ENST00000399688.7@PAICS	ENST00000399688.7	protein_coding	56436138,56441663,56446357,56446695,56448418,56448710,56450619,56451872,56453603,56459372	56436328,56441860,56446377,56446873,56448597,56448823,56450702,56452052,56453761,56461361	Gene ID= ENSG00000128050.8 TPM= 14.01 Transcript Type= protein_coding
chr4	56466915	56503107	56466915	56503107	+	ENST00000342756.9@SRP72	ENST00000342756.9	protein_coding	56466915,56469653,56471720,56474054,56474280,56476671,56478379,56478592,56483139,56484736,56486325,56487949,56489388,56490333,56490568,56491431,56495357,56500536,56501684	56467744,56469773,56471843,56474197,56474391,56476702,56478503,56478649,56483270,56484864,56486397,56488013,56489483,56490436,56490645,56491568,56495394,56500695,56503107	Gene ID= ENSG00000174780.15 TPM= 25.69 Transcript Type= protein_coding
chr4	56467618	56474508	56467618	56474508	+	ENST00000504757.2@SRP72	ENST00000504757.2	protein_coding	56467618,56469653,56471720,56474054,56474280	56467744,56469773,56471843,56474197,56474508	Gene ID= ENSG00000174780.15 TPM= 1.17 Transcript Type= protein_coding
chr4	56647312	56648241	56647312	56648241	-	transcript2145.chr4.nnic@NA	transcript2145.chr4.nnic	NA	56647312	56648241	Gene ID= novel_gene_chr4_2146 TPM= 2.34 Transcript Type= NA
chr4	56647988	56681706	56647988	56681706	-	ENST00000420433.5@HOPX	ENST00000420433.5	protein_coding	56681255,56657775,56655857,56647988	56681706,56657899,56656012,56648797	Gene ID= ENSG00000171476.21 TPM= 19.53 Transcript Type= protein_coding
chr4	56647998	56681294	56647998	56681294	-	ENST00000556376.6@HOPX	ENST00000556376.6	protein_coding	56681255,56676499,56655857,56647998	56681294,56676566,56656012,56648797	Gene ID= ENSG00000171476.21 TPM= 5.52 Transcript Type= protein_coding
chr4	56647998	56656507	56647998	56656507	-	ENST00000381255.7@HOPX	ENST00000381255.7	protein_coding	56656300,56655857,56647998	56656507,56656012,56648797	Gene ID= ENSG00000171476.21 TPM= 3.19 Transcript Type= protein_coding
chr4	56647988	56681899	56647988	56681899	-	ENST00000337881.11@HOPX	ENST00000337881.11	protein_coding	56681255,56655857,56647988	56681899,56656012,56648797	Gene ID= ENSG00000171476.21 TPM= 202.38 Transcript Type= protein_coding
chr4	56648000	56651202	56648000	56651202	-	ENST00000503864.2@HOPX	ENST00000503864.2	protein_coding	56648000	56651202	Gene ID= ENSG00000171476.21 TPM= 1.17 Transcript Type= retained_intron
chr4	56647998	56655417	56647998	56655417	-	transcript2147.chr4.nnic@NA	transcript2147.chr4.nnic	NA	56647998	56655417	Gene ID= novel_gene_chr4_2148 TPM= 3.5 Transcript Type= NA
chr4	56672856	56674934	56672856	56674934	+	transcript2141.chr4.nnic@NA	transcript2141.chr4.nnic	NA	56672856	56674934	Gene ID= novel_gene_chr4_2142 TPM= 33.86 Transcript Type= NA
chr4	56679480	56681236	56679480	56681236	-	transcript2143.chr4.nnic@NA	transcript2143.chr4.nnic	NA	56679480	56681236	Gene ID= novel_gene_chr4_2144 TPM= 2.34 Transcript Type= NA
chr4	56809872	56821694	56809872	56821694	-	ENST00000504762.1@SPINK2	ENST00000504762.1	protein_coding	56821503,56820536,56811685,56809872	56821694,56820579,56811794,56810184	Gene ID= ENSG00000128040.10 TPM= 1.17 Transcript Type= protein_coding
chr4	56907909	56935844	56907909	56935844	+	ENST00000309042.11@REST	ENST00000309042.11	protein_coding	56907909,56910630,56919787,56929841	56908213,56911536,56919870,56935844	Gene ID= ENSG00000084093.16 TPM= 12.26 Transcript Type= protein_coding
chr4	56908913	56935836	56908913	56935836	+	ENST00000619101.4@REST	ENST00000619101.4	protein_coding	56908913,56910630,56919787,56929841	56909039,56911536,56919870,56935836	Gene ID= ENSG00000084093.16 TPM= 11.09 Transcript Type= protein_coding
chr4	56963370	56978823	56963370	56978823	-	ENST00000264230.4@NOA1	ENST00000264230.4	protein_coding	56976442,56973858,56973148,56968384,56966620,56964406,56963370	56978823,56974022,56973353,56968515,56966736,56964526,56963661	Gene ID= ENSG00000084092.6 TPM= 75.89 Transcript Type= protein_coding
chr4	56963370	56977623	56963370	56977623	-	transcript2168.chr4.nnic@NOA1	transcript2168.chr4.nnic	protein_coding	56976442,56973858,56973148,56968384,56964406,56963370	56977623,56974022,56973353,56968515,56964526,56963661	Gene ID= ENSG00000084092.6 TPM= 2.34 Transcript Type= NA
chr4	56978896	57031158	56978896	57031158	+	transcript2162.chr4.nic@POLR2B	transcript2162.chr4.nic	protein_coding	56978896,56985260,56986354,56990748,56994404,56994647,56995251,56999617,57005246,57005600,57006816,57010361,57010748,57010989,57015502,57017043,57017560,57020899,57022152,57023330,57023662,57024005,57024886,57025377,57030204,57030899	56979004,56985457,56986426,56990898,56994516,56994866,56995409,56999781,57005442,57005719,57007002,57010504,57010887,57011100,57015656,57017241,57017728,57020995,57022246,57023580,57023751,57024112,57024999,57025537,57030399,57031158	Gene ID= ENSG00000047315.15 TPM= 5.25 Transcript Type= NA
chr4	56977742	57031158	56977742	57031158	+	ENST00000381227.5@POLR2B	ENST00000381227.5	protein_coding	56977742,56978640,56986354,56990748,56994404,56994647,56995251,56999617,57005246,57005600,57006816,57010361,57010748,57010989,57015502,57017043,57017560,57020899,57022152,57023330,57023662,57024005,57024886,57025377,57030204,57030899	56977808,56979004,56986426,56990898,56994516,56994866,56995409,56999781,57005442,57005719,57007002,57010504,57010887,57011100,57015656,57017241,57017728,57020995,57022246,57023580,57023751,57024112,57024999,57025537,57030399,57031158	Gene ID= ENSG00000047315.15 TPM= 54.29 Transcript Type= protein_coding
chr4	57030773	57110385	57030773	57110385	-	ENST00000295666.6@IGFBP7	ENST00000295666.6	protein_coding	57109877,57040824,57033195,57032426,57030773	57110385,57040933,57033311,57032552,57031336	Gene ID= ENSG00000163453.11 TPM= 9.34 Transcript Type= protein_coding
chr4	57032038	57110385	57032038	57110385	-	ENST00000514062.2@IGFBP7	ENST00000514062.2	protein_coding	57109877,57040824,57033195,57032038	57110385,57040933,57033311,57032552	Gene ID= ENSG00000163453.11 TPM= 1.17 Transcript Type= protein_coding
chr4	67468748	67545606	67468748	67545606	-	ENST00000273853.10@CENPC	ENST00000273853.10	protein_coding	67545338,67544149,67540980,67539840,67530815,67519217,67518156,67514074,67512402,67508814,67506788,67505205,67495159,67493884,67492869,67492180,67489967,67474888,67468748	67545606,67544195,67541050,67539934,67530914,67519502,67518368,67514687,67512569,67509105,67506934,67505284,67495212,67493988,67492997,67492275,67490121,67474978,67472675	Gene ID= ENSG00000145241.10 TPM= 1.17 Transcript Type= protein_coding
chr4	67558728	67606898	67558728	67606898	+	ENST00000265404.6@STAP1	ENST00000265404.6	protein_coding	67558728,67571084,67575385,67577203,67581305,67583574,67590884,67593260,67606296	67558929,67571155,67575498,67577259,67581471,67583702,67590953,67593356,67606898	Gene ID= ENSG00000035720.7 TPM= 1.17 Transcript Type= protein_coding
chr4	67612652	67701179	67612652	67701179	-	ENST00000322244.9@UBA6	ENST00000322244.9	protein_coding	67701049,67696645,67682119,67681563,67678439,67677611,67673697,67670470,67668551,67665189,67663885,67663139,67662189,67649068,67646724,67645938,67644698,67641151,67638943,67635453,67634429,67634242,67633345,67631857,67631708,67630466,67629071,67626360,67624994,67624126,67623135,67622831,67612652	67701179,67696707,67682213,67681591,67678533,67677722,67673777,67670592,67668674,67665292,67663947,67663215,67662255,67649211,67646791,67646016,67644778,67641228,67639124,67635558,67634518,67634322,67633473,67631908,67631771,67630535,67629142,67626477,67625187,67624253,67623222,67622925,67619132	Gene ID= ENSG00000033178.12 TPM= 4.67 Transcript Type= protein_coding
chr4	67701333	67722502	67701333	67722502	+	ENST00000506606.1@UBA6-AS1	ENST00000506606.1	antisense_RNA	67701333,67720422	67701484,67722502	Gene ID= ENSG00000248049.6 TPM= 4.67 Transcript Type= antisense_RNA
chr4	68310387	68350089	68310387	68350089	-	ENST00000344157.8@YTHDC1	ENST00000344157.8	protein_coding	68349726,68338283,68337572,68337027,68333308,68332794,68332103,68330202,68330002,68324139,68322749,68320123,68318826,68318690,68318519,68316314,68310387	68350089,68338384,68337900,68337450,68333397,68332847,68332197,68330310,68330119,68324223,68322915,68320205,68318862,68318729,68318581,68316448,68314323	Gene ID= ENSG00000083896.12 TPM= 4.67 Transcript Type= protein_coding
chr4	69841212	69860152	69841212	69860152	-	ENST00000226444.3@SULT1E1	ENST00000226444.3	protein_coding	69860049,69857500,69855301,69854217,69849437,69847698,69844161,69841212	69860152,69857653,69855426,69854314,69849563,69847792,69844341,69842106	Gene ID= ENSG00000109193.11 TPM= 1.17 Transcript Type= protein_coding
chr4	70196496	70204576	70196496	70204576	+	ENST00000396094.6@ODAM	ENST00000396094.6	protein_coding	70196496,70196692,70197274,70197924,70198579,70200497,70201454,70202258,70202756,70203156,70204175	70196594,70196733,70197321,70198157,70198626,70200601,70201501,70202329,70202917,70203214,70204576	Gene ID= ENSG00000109205.16 TPM= 1.17 Transcript Type= protein_coding
chr4	70688479	70690551	70688479	70690551	+	ENST00000254803.3@UTP3	ENST00000254803.3	protein_coding	70688479	70690551	Gene ID= ENSG00000132467.3 TPM= 5.84 Transcript Type= protein_coding
chr4	70704689	70808619	70704689	70808619	+	transcript2231.chr4.nic@RUFY3	transcript2231.chr4.nic	protein_coding	70704689,70762519,70763552,70764475,70768538,70773511,70775168,70778369,70783091,70784796,70788806,70789495,70793785,70794795,70800141,70802956,70804348,70806516	70705294,70762692,70763669,70764576,70768661,70773572,70775233,70778438,70783183,70784879,70788973,70789592,70793904,70794894,70800205,70802983,70804416,70808619	Gene ID= ENSG00000018189.12 TPM= 5.25 Transcript Type= NA
chr4	70704707	70806871	70704707	70806871	+	transcript2237.chr4.nic@RUFY3	transcript2237.chr4.nic	protein_coding	70704707,70762519,70763552,70764475,70768538,70773511,70775168,70778369,70783091,70784796,70788806,70789495,70793785,70794795,70800141,70802956,70806516	70705294,70762692,70763669,70764576,70768661,70773572,70775233,70778438,70783183,70784879,70788973,70789592,70793904,70794894,70800205,70802983,70806871	Gene ID= ENSG00000018189.12 TPM= 7.01 Transcript Type= NA
chr4	70704775	70793557	70704775	70793557	+	transcript2249.chr4.nic@RUFY3	transcript2249.chr4.nic	protein_coding	70704775,70762519,70763552,70764475,70768538,70773511,70775168,70778369,70783091,70784796,70788806,70789495,70791225	70705294,70762692,70763669,70764576,70768661,70773572,70775233,70778438,70783183,70784879,70788973,70789592,70793557	Gene ID= ENSG00000018189.12 TPM= 2.34 Transcript Type= NA
chr4	70722011	70793557	70722011	70793557	+	ENST00000226328.8@RUFY3	ENST00000226328.8	protein_coding	70722011,70762519,70763552,70764475,70768538,70773511,70775168,70778369,70783091,70784796,70788806,70789495,70791225	70722751,70762692,70763669,70764576,70768661,70773572,70775233,70778438,70783183,70784879,70788973,70789592,70793557	Gene ID= ENSG00000018189.12 TPM= 3.5 Transcript Type= protein_coding
chr4	70704749	70707721	70704749	70707721	+	transcript2277.chr4.nnic@NA	transcript2277.chr4.nnic	NA	70704749	70707721	Gene ID= novel_gene_chr4_2278 TPM= 2.34 Transcript Type= NA
chr4	70735887	70737577	70735887	70737577	-	transcript2279.chr4.nnic@NA	transcript2279.chr4.nnic	NA	70735887	70737577	Gene ID= novel_gene_chr4_2280 TPM= 2.34 Transcript Type= NA
chr4	70902336	70988168	70902336	70988168	+	ENST00000309395.6@MOB1B	ENST00000309395.6	protein_coding	70902336,70958874,70969931,70975153,70979128,70981980	70902550,70959040,70970024,70975286,70979291,70988168	Gene ID= ENSG00000173542.8 TPM= 8.17 Transcript Type= protein_coding
chr4	70902347	70976743	70902347	70976743	+	ENST00000509041.5@MOB1B	ENST00000509041.5	protein_coding	70902347,70958874,70969931,70975153	70902550,70959040,70970024,70976743	Gene ID= ENSG00000173542.8 TPM= 1.17 Transcript Type= retained_intron
chr4	70993439	71030914	70993439	71030914	+	ENST00000286648.9@DCK	ENST00000286648.9	protein_coding	70993439,70998067,71022367,71023559,71025816,71026665,71029352	70993926,70998182,71022560,71023706,71025931,71026755,71030914	Gene ID= ENSG00000156136.9 TPM= 91.07 Transcript Type= protein_coding
chr4	70993563	71030914	70993563	71030914	+	ENST00000503359.5@DCK	ENST00000503359.5	protein_coding	70993563,70998067,71022367,71023559,71025816,71026665,71029352	70994017,70998182,71022560,71023706,71025931,71026755,71030914	Gene ID= ENSG00000156136.9 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr4	71186757	71569717	71186757	71569717	+	ENST00000264485.10@SLC4A4	ENST00000264485.10	protein_coding	71186757,71236576,71255220,71339370,71349912,71357008,71397577,71440616,71447646,71450389,71451188,71453495,71466444,71472699,71486948,71497501,71532062,71534227,71546350,71547648,71555140,71557712,71560093,71563793,71567004,71567788	71187401,71236649,71255399,71339505,71350072,71357187,71397653,71440773,71447733,71450543,71451301,71453669,71466577,71472970,71487018,71497692,71532175,71534388,71546528,71547720,71555208,71557885,71560254,71563889,71567083,71569717	Gene ID= ENSG00000080493.15 TPM= 15.76 Transcript Type= protein_coding
chr4	71186764	71473729	71186764	71473729	+	transcript2299.chr4.nic@SLC4A4	transcript2299.chr4.nic	protein_coding	71186764,71236576,71255220,71339370,71349912,71357008,71397577,71440616,71447646,71450389,71451188,71453495,71466444,71472699	71187401,71236649,71255399,71339505,71350072,71357187,71397653,71440773,71447733,71450543,71451301,71453669,71466577,71473729	Gene ID= ENSG00000080493.15 TPM= 5.25 Transcript Type= NA
chr4	71186764	71358329	71186764	71358329	+	transcript2300.chr4.nic@SLC4A4	transcript2300.chr4.nic	protein_coding	71186764,71236576,71255220,71339370,71349912,71357008	71187401,71236649,71255399,71339505,71350072,71358329	Gene ID= ENSG00000080493.15 TPM= 3.5 Transcript Type= NA
chr4	73056084	73069713	73056084	73069713	-	transcript2306.chr4.nnic@COX18	transcript2306.chr4.nnic	protein_coding	73069317,73068029,73065250,73064778,73061813,73057975,73056084	73069713,73068129,73065413,73064899,73061920,73058287,73057166	Gene ID= ENSG00000163626.16 TPM= 2.34 Transcript Type= NA
chr4	73059366	73061728	73059366	73061728	+	transcript2314.chr4.nnic@NA	transcript2314.chr4.nnic	NA	73059366	73061728	Gene ID= novel_gene_chr4_2315 TPM= 5.84 Transcript Type= NA
chr4	73075686	73223114	73075686	73223114	-	ENST00000509867.6@ANKRD17	ENST00000509867.6	protein_coding	73222974,73177380,73161192,73156019,73155631,73153880,73151430,73148813,73147241,73146764,73144745,73142640,73142242,73141741,73139531,73135117,73125201,73124913,73121617,73120881,73120162,73118688,73115821,73113792,73102376,73098073,73097117,73094079,73090667,73085249,73078642,73077355,73076940,73075686	73223114,73177533,73161348,73156166,73155778,73154113,73151524,73149050,73147432,73146873,73144832,73142767,73142385,73141843,73140283,73135265,73125312,73125058,73121759,73121094,73120337,73118850,73115916,73113908,73102547,73098520,73097272,73094228,73092300,73085446,73078890,73077533,73077104,73076290	Gene ID= ENSG00000132466.18 TPM= 9.34 Transcript Type= protein_coding
chr4	73102463	73259136	73102463	73259136	-	transcript2319.chr4.nic@ANKRD17	transcript2319.chr4.nic	protein_coding	73258276,73177380,73161192,73156019,73155631,73153880,73151430,73148813,73147241,73146764,73144745,73142640,73142242,73141741,73139531,73135117,73125201,73124913,73121617,73120881,73120162,73118688,73115821,73113792,73102463	73259136,73177533,73161348,73156166,73155778,73154113,73151524,73149050,73147432,73146873,73144832,73142767,73142385,73141843,73140283,73135265,73125312,73125058,73121759,73121094,73120337,73118850,73115916,73113908,73102547	Gene ID= ENSG00000132466.18 TPM= 27.44 Transcript Type= NA
chr4	73102463	73259136	73102463	73259136	-	transcript2322.chr4.nic@ANKRD17	transcript2322.chr4.nic	protein_coding	73258276,73177380,73161192,73156019,73155631,73153880,73151430,73148813,73147241,73146764,73144745,73142640,73142242,73141741,73135117,73125201,73124913,73121617,73120881,73120162,73118688,73115821,73113792,73102463	73259136,73177533,73161348,73156166,73155778,73154113,73151524,73149050,73147432,73146873,73144832,73142767,73142385,73141843,73135265,73125312,73125058,73121759,73121094,73120337,73118850,73115916,73113908,73102547	Gene ID= ENSG00000132466.18 TPM= 7.59 Transcript Type= NA
chr4	73740506	73743716	73740506	73743716	+	ENST00000307407.7@CXCL8	ENST00000307407.7	protein_coding	73740506,73741542,73741949,73742449	73740722,73741677,73742032,73743716	Gene ID= ENSG00000169429.10 TPM= 5.84 Transcript Type= protein_coding
chr4	73836497	73838760	73836497	73838760	+	ENST00000226317.9@CXCL6	ENST00000226317.9	protein_coding	73836497,73836964,73837203,73837623	73836859,73837096,73837286,73838760	Gene ID= ENSG00000124875.9 TPM= 1.17 Transcript Type= protein_coding
chr4	73869404	73871242	73869404	73871242	+	ENST00000395761.3@CXCL1	ENST00000395761.3	protein_coding	73869404,73869669,73869906,73870521	73869570,73869792,73869989,73871242	Gene ID= ENSG00000163739.4 TPM= 9.34 Transcript Type= protein_coding
chr4	74036589	74038689	74036589	74038689	-	ENST00000296026.4@CXCL3	ENST00000296026.4	protein_coding	74038512,74038290,74038093,74036589	74038689,74038413,74038176,74037277	Gene ID= ENSG00000163734.4 TPM= 2.34 Transcript Type= protein_coding
chr4	74097035	74099293	74097035	74099293	-	ENST00000508487.2@CXCL2	ENST00000508487.2	protein_coding	74099021,74098799,74098601,74097035	74099293,74098922,74098684,74097771	Gene ID= ENSG00000081041.8 TPM= 46.7 Transcript Type= protein_coding
chr4	74097035	74099197	74097035	74099197	-	transcript2343.chr4.nic@CXCL2	transcript2343.chr4.nic	protein_coding	74099021,74098601,74097035	74099197,74098922,74097771	Gene ID= ENSG00000081041.8 TPM= 3.5 Transcript Type= NA
chr4	74097039	74099195	74097039	74099195	-	transcript2344.chr4.nnic@NA	transcript2344.chr4.nnic	NA	74097039	74099195	Gene ID= novel_gene_chr4_2345 TPM= 9.34 Transcript Type= NA
chr4	74158118	74162253	74158118	74162253	+	ENST00000461101.1@MTHFD2L	ENST00000461101.1	protein_coding	74158118,74160055	74158281,74162253	Gene ID= ENSG00000163738.18 TPM= 8.17 Transcript Type= processed_transcript
chr4	74162507	74167857	74162507	74167857	-	transcript2354.chr4.nnic@NA	transcript2354.chr4.nnic	NA	74162507	74167857	Gene ID= novel_gene_chr4_2355 TPM= 15.18 Transcript Type= NA
chr4	74365143	74388751	74365143	74388751	+	ENST00000244869.2@EREG	ENST00000244869.2	protein_coding	74365143,74379448,74381014,74382645,74384727	74365375,74379534,74381137,74382794,74388751	Gene ID= ENSG00000124882.3 TPM= 1.17 Transcript Type= protein_coding
chr4	74445134	74455009	74445134	74455009	+	ENST00000395748.7@AREG	ENST00000395748.7	protein_coding	74445134,74446534,74449047,74450380,74452544,74454759	74445406,74446782,74449248,74450532,74452655,74455009	Gene ID= ENSG00000109321.10 TPM= 8.17 Transcript Type= protein_coding
chr4	74744759	74794634	74744759	74794634	-	transcript2362.chr4.nic@BTC	transcript2362.chr4.nic	protein_coding	74794262,74770058,74755859,74748040,74744759	74794634,74770156,74755976,74748149,74746675	Gene ID= ENSG00000174808.11 TPM= 3.5 Transcript Type= NA
chr4	74744759	74794686	74744759	74794686	-	ENST00000395743.7@BTC	ENST00000395743.7	protein_coding	74794262,74770058,74755859,74750573,74748040,74744759	74794686,74770156,74755976,74750719,74748149,74746675	Gene ID= ENSG00000174808.11 TPM= 9.34 Transcript Type= protein_coding
chr4	74933116	75050113	74933116	75050113	+	ENST00000307428.7@PARM1	ENST00000307428.7	protein_coding	74933116,75012425,75033883,75046163	74933370,75013150,75033961,75050113	Gene ID= ENSG00000169116.11 TPM= 99.83 Transcript Type= protein_coding
chr4	74933095	75050115	74933095	75050115	+	ENST00000513238.5@PARM1	ENST00000513238.5	protein_coding	74933095,75033883,75046163	74933370,75033961,75050115	Gene ID= ENSG00000169116.11 TPM= 13.43 Transcript Type= protein_coding
chr4	75479037	75514685	75479037	75514685	-	ENST00000324439.9@RCHY1	ENST00000324439.9	protein_coding	75514197,75509177,75508820,75494101,75491889,75491724,75491611,75490581,75479037	75514685,75509296,75508935,75494179,75491933,75491782,75491637,75490701,75482666	Gene ID= ENSG00000163743.13 TPM= 5.84 Transcript Type= protein_coding
chr4	75514473	75530026	75514473	75530026	+	ENST00000311638.7@THAP6	ENST00000311638.7	protein_coding	75514473,75515433,75516772,75521736,75526960	75514520,75515532,75516979,75521861,75530026	Gene ID= ENSG00000174796.12 TPM= 9.34 Transcript Type= protein_coding
chr4	75531782	75535180	75531782	75535180	-	transcript2393.chr4.nnic@NA	transcript2393.chr4.nnic	NA	75531782	75535180	Gene ID= novel_gene_chr4_2394 TPM= 4.67 Transcript Type= NA
chr4	75642782	75673969	75642782	75673969	-	ENST00000359707.8@G3BP2	ENST00000359707.8	protein_coding	75673208,75661931,75658843,75657557,75656924,75655768,75655066,75653983,75648639,75647029,75646338,75642782	75673969,75662049,75658924,75657730,75657014,75655870,75655246,75654081,75648741,75647157,75646456,75645702	Gene ID= ENSG00000138757.14 TPM= 24.52 Transcript Type= protein_coding
chr4	75642782	75673129	75642782	75673129	-	transcript2409.chr4.nic@G3BP2	transcript2409.chr4.nic	protein_coding	75673019,75661931,75658843,75657557,75656924,75655768,75655066,75648639,75647029,75646338,75642782	75673129,75662049,75658924,75657730,75657014,75655870,75655246,75648741,75647157,75646456,75645702	Gene ID= ENSG00000138757.14 TPM= 7.59 Transcript Type= NA
chr4	75644389	75673401	75644389	75673401	-	ENST00000357854.7@G3BP2	ENST00000357854.7	protein_coding	75673208,75661931,75658843,75657557,75656924,75655768,75655066,75648639,75647029,75646338,75644389	75673401,75662049,75658924,75657730,75657014,75655870,75655246,75648741,75647157,75646456,75645702	Gene ID= ENSG00000138757.14 TPM= 23.35 Transcript Type= protein_coding
chr4	75724593	75814213	75724593	75814213	+	ENST00000514213.6@USO1	ENST00000514213.6	protein_coding	75724593,75752373,75752540,75757497,75770439,75770822,75771082,75774676,75782680,75787062,75790150,75790643,75793690,75799622,75800351,75800618,75801079,75804134,75805140,75806486,75808953,75810432,75812160,75813206	75724885,75752459,75752604,75757573,75770539,75770924,75771137,75774796,75782858,75787202,75790238,75790797,75793901,75799732,75800469,75800799,75801200,75804272,75805303,75806572,75809051,75810539,75812375,75814213	Gene ID= ENSG00000138768.14 TPM= 119.09 Transcript Type= protein_coding
chr4	75754088	75755602	75754088	75755602	-	transcript2440.chr4.nnic@NA	transcript2440.chr4.nnic	NA	75754088	75755602	Gene ID= novel_gene_chr4_2441 TPM= 3.5 Transcript Type= NA
chr4	75792024	75792840	75792024	75792840	-	transcript2444.chr4.nnic@NA	transcript2444.chr4.nnic	NA	75792024	75792840	Gene ID= novel_gene_chr4_2445 TPM= 3.5 Transcript Type= NA
chr4	75796343	75797170	75796343	75797170	-	transcript2442.chr4.nnic@NA	transcript2442.chr4.nnic	NA	75796343	75797170	Gene ID= novel_gene_chr4_2443 TPM= 4.67 Transcript Type= NA
chr4	75910849	75941010	75910849	75941010	-	transcript2447.chr4.nnic@NAAA	transcript2447.chr4.nnic	protein_coding	75940744,75940001,75936109,75931214,75925735,75920951,75920738,75919909,75918761,75914868,75910849	75941010,75940165,75936235,75931304,75925811,75921123,75920800,75919975,75918789,75914985,75911353	Gene ID= ENSG00000138744.14 TPM= 3.5 Transcript Type= NA
chr4	75913656	75941061	75913656	75941061	-	transcript2448.chr4.nnic@NAAA	transcript2448.chr4.nnic	protein_coding	75940744,75940001,75936109,75931214,75925735,75920951,75920738,75919909,75918761,75914908,75913656	75941061,75940165,75936235,75931304,75925811,75921123,75920800,75919975,75918789,75914985,75914338	Gene ID= ENSG00000138744.14 TPM= 2.34 Transcript Type= NA
chr4	75913666	75940994	75913666	75940994	-	transcript2451.chr4.nnic@NAAA	transcript2451.chr4.nnic	protein_coding	75940744,75940001,75936109,75931214,75925735,75920951,75920738,75919909,75918761,75913666	75940994,75940165,75936235,75931304,75925811,75921123,75920800,75919975,75918789,75914338	Gene ID= ENSG00000138744.14 TPM= 2.34 Transcript Type= NA
chr4	75910850	75941061	75910850	75941061	-	transcript2455.chr4.nnic@NAAA	transcript2455.chr4.nnic	protein_coding	75940744,75940001,75936109,75931214,75925735,75920951,75920738,75919909,75910850	75941061,75940165,75936235,75931304,75925811,75921123,75920800,75919975,75911353	Gene ID= ENSG00000138744.14 TPM= 3.5 Transcript Type= NA
chr4	75913657	75941051	75913657	75941051	-	ENST00000286733.8@NAAA	ENST00000286733.8	protein_coding	75940744,75940001,75936109,75931214,75925735,75920951,75920738,75919909,75918761,75914868,75913657	75941051,75940165,75936235,75931304,75925811,75921123,75920800,75919975,75918789,75914985,75914338	Gene ID= ENSG00000138744.14 TPM= 11.68 Transcript Type= protein_coding
chr4	75934891	75940983	75934891	75940983	-	ENST00000507187.2@NAAA	ENST00000507187.2	protein_coding	75940744,75940001,75934891	75940983,75940165,75936235	Gene ID= ENSG00000138744.14 TPM= 1.17 Transcript Type= protein_coding
chr4	75949916	75990960	75949916	75990960	-	ENST00000356260.9@SDAD1	ENST00000356260.9	protein_coding	75990752,75981933,75981372,75977646,75975924,75975744,75974076,75973317,75971357,75970309,75969296,75967277,75965764,75964135,75961211,75961028,75960066,75957847,75957518,75957325,75955975,75949916	75990960,75982037,75981470,75977756,75975995,75975844,75974133,75973391,75971458,75970378,75969399,75967334,75965822,75964211,75961308,75961104,75960192,75957941,75957708,75957409,75956136,75950797	Gene ID= ENSG00000198301.11 TPM= 30.36 Transcript Type= protein_coding
chr4	75949906	75990938	75949906	75990938	-	ENST00000395710.5@SDAD1	ENST00000395710.5	protein_coding	75990752,75981933,75981372,75977646,75975924,75975744,75974076,75973317,75971357,75970309,75969296,75967277,75965764,75964135,75961211,75961028,75960066,75957847,75957518,75957325,75955975,75949906	75990938,75982037,75981545,75977756,75975995,75975844,75974133,75973391,75971458,75970378,75969399,75967334,75965822,75964211,75961308,75961104,75960192,75957941,75957708,75957409,75956136,75950797	Gene ID= ENSG00000198301.11 TPM= 8.17 Transcript Type= nonsense_mediated_decay
chr4	76021117	76023497	76021117	76023497	-	ENST00000306602.2@CXCL10	ENST00000306602.2	protein_coding	76023371,76022691,76022366,76021117	76023497,76022817,76022455,76021948	Gene ID= ENSG00000169245.5 TPM= 14.01 Transcript Type= protein_coding
chr4	76114664	76148515	76114664	76148515	-	ENST00000264883.7@NUP54	ENST00000264883.7	protein_coding	76148308,76144390,76144149,76136186,76134175,76132523,76131230,76130656,76124649,76118075,76117664,76114664	76148515,76144473,76144292,76136412,76134362,76132719,76131284,76130749,76124756,76118194,76117774,76115494	Gene ID= ENSG00000138750.14 TPM= 17.51 Transcript Type= protein_coding
chr4	76158760	76234536	76158760	76234536	-	ENST00000638295.1@SCARB2	ENST00000638295.1	protein_coding	76234303,76195707,76180954,76179517,76176437,76175791,76174144,76169867,76168403,76166250,76163225,76158760	76234536,76195864,76181101,76179705,76176528,76175910,76174313,76169985,76168476,76166301,76163383,76161751	Gene ID= ENSG00000138760.9 TPM= 1.75 Transcript Type= protein_coding
chr4	76158733	76213918	76158733	76213918	-	ENST00000264896.7@SCARB2	ENST00000264896.7	protein_coding	76213427,76195707,76180954,76179517,76176437,76175791,76174144,76169867,76168403,76166250,76163225,76158733	76213918,76195864,76181101,76179705,76176528,76175910,76174313,76169985,76168476,76166301,76163383,76161751	Gene ID= ENSG00000138760.9 TPM= 147.7 Transcript Type= protein_coding
chr4	76306026	76311599	76306026	76311599	+	ENST00000237642.6@STBD1	ENST00000237642.6	protein_coding	76306026,76309144	76306989,76311599	Gene ID= ENSG00000118804.8 TPM= 59.55 Transcript Type= protein_coding
chr4	76311914	76314034	76311914	76314034	+	transcript2497.chr4.nnic@NA	transcript2497.chr4.nnic	NA	76311914	76314034	Gene ID= novel_gene_chr4_2498 TPM= 4.67 Transcript Type= NA
chr4	76586192	76779790	76586192	76779790	+	transcript2499.chr4.nic@SHROOM3	transcript2499.chr4.nic	protein_coding	76586192,76710156,76730804,76738761,76749017,76754311,76756449,76759545,76770626,76778809	76586469,76710287,76730935,76741926,76749090,76755192,76756937,76759695,76770898,76779790	Gene ID= ENSG00000138771.14 TPM= 38.53 Transcript Type= NA
chr4	76688962	76779790	76688962	76779790	+	transcript2500.chr4.nic@SHROOM3	transcript2500.chr4.nic	protein_coding	76688962,76710156,76730804,76738761,76749017,76754311,76756449,76759545,76770626,76778809	76689702,76710287,76730935,76741926,76749090,76755192,76756937,76759695,76770898,76779790	Gene ID= ENSG00000138771.14 TPM= 33.86 Transcript Type= NA
chr4	76586288	76589308	76586288	76589308	+	transcript2505.chr4.nnic@NA	transcript2505.chr4.nnic	NA	76586288	76589308	Gene ID= novel_gene_chr4_2506 TPM= 2.34 Transcript Type= NA
chr4	76590511	76596518	76590511	76596518	-	transcript2507.chr4.nnic@NA	transcript2507.chr4.nnic	NA	76590511	76596518	Gene ID= novel_gene_chr4_2508 TPM= 7.01 Transcript Type= NA
chr4	76894029	76898059	76894029	76898059	-	transcript2509.chr4.nnic@NA	transcript2509.chr4.nnic	NA	76894029	76898059	Gene ID= novel_gene_chr4_2510 TPM= 3.5 Transcript Type= NA
chr4	76949680	77040152	76949680	77040152	+	transcript2520.chr4.nic@SEPT11	transcript2520.chr4.nic	protein_coding	76949680,76996425,77005601,77011735,77014856,77019165,77020502,77028629,77030783,77039073	76949930,76996539,77005796,77011921,77015017,77019261,77020670,77028761,77030970,77040152	Gene ID= ENSG00000138758.11 TPM= 2.34 Transcript Type= NA
chr4	76949680	77040154	76949680	77040154	+	transcript2521.chr4.nic@SEPT11	transcript2521.chr4.nic	protein_coding	76949680,76996425,77005601,77011735,77014856,77019165,77020502,77028629,77030783,77039743	76949930,76996539,77005796,77011921,77015017,77019261,77020670,77028761,77030970,77040154	Gene ID= ENSG00000138758.11 TPM= 11.68 Transcript Type= NA
chr4	76949703	77038614	76949703	77038614	+	ENST00000264893.10@SEPT11	ENST00000264893.10	protein_coding	76949703,76996425,77005601,77011735,77014856,77019165,77020502,77028629,77030783,77034497	76949930,76996539,77005796,77011921,77015017,77019261,77020670,77028761,77030970,77038614	Gene ID= ENSG00000138758.11 TPM= 77.06 Transcript Type= protein_coding
chr4	76949751	77032158	76949751	77032158	+	ENST00000502584.5@SEPT11	ENST00000502584.5	protein_coding	76949751,76996425,77005601,77011735,77014856,77019165,77020502,77028629,77030783	76949930,76996539,77005796,77011921,77015017,77019261,77020670,77028761,77032158	Gene ID= ENSG00000138758.11 TPM= 5.84 Transcript Type= protein_coding
chr4	76959255	76963973	76959255	76963973	-	transcript2558.chr4.nnic@NA	transcript2558.chr4.nnic	NA	76959255	76963973	Gene ID= novel_gene_chr4_2559 TPM= 2.34 Transcript Type= NA
chr4	77037129	77040145	77037129	77040145	+	transcript2554.chr4.nnic@NA	transcript2554.chr4.nnic	NA	77037129	77040145	Gene ID= novel_gene_chr4_2555 TPM= 3.5 Transcript Type= NA
chr4	77047158	77076005	77047158	77076005	-	ENST00000237654.8@CCNI	ENST00000237654.8	protein_coding	77075472,77066249,77058507,77056249,77055962,77055150,77047158	77076005,77066405,77058635,77056323,77056102,77055380,77048662	Gene ID= ENSG00000118816.9 TPM= 441.44 Transcript Type= protein_coding
chr4	77157151	77170059	77157151	77170059	+	ENST00000316355.9@CCNG2	ENST00000316355.9	protein_coding	77157151,77158533,77159367,77160721,77161480,77161649,77164274,77165801	77157506,77158670,77159504,77160971,77161558,77161747,77164479,77170059	Gene ID= ENSG00000138764.14 TPM= 10.51 Transcript Type= protein_coding
chr4	77157243	77167210	77157243	77167210	+	transcript2564.chr4.nic@CCNG2	transcript2564.chr4.nic	protein_coding	77157243,77158533,77159367,77160721,77161480,77161649,77164274	77157506,77158670,77159504,77160971,77161558,77161747,77167210	Gene ID= ENSG00000138764.14 TPM= 14.01 Transcript Type= NA
chr4	77862520	77952790	77862520	77952790	+	ENST00000315567.12@MRPL1	ENST00000315567.12	protein_coding	77862520,77871744,77883242,77885256,77887220,77894139,77909266,77949797,77952489	77862879,77871855,77883500,77885339,77887291,77894250,77909372,77949878,77952790	Gene ID= ENSG00000169288.17 TPM= 15.18 Transcript Type= protein_coding
chr4	78057570	78544269	78057570	78544269	+	ENST00000512123.3@FRAS1	ENST00000512123.3	protein_coding	78057570,78065985,78237510,78245233,78252392,78255242,78265025,78266834,78267241,78278655,78281398,78282820,78284405,78286405,78308066,78315594,78317368,78318810,78333272,78337674,78363513,78363908,78369838,78372718,78374111,78375739,78379726,78384059,78387375,78400734,78407663,78412969,78418949,78421863,78424388,78429095,78430292,78432357,78438570,78438902,78441162,78445522,78446727,78448053,78450151,78451772,78452175,78464021,78464443,78466208,78469978,78472180,78473438,78475438,78477815,78479374,78481804,78482388,78488875,78496805,78499721,78507421,78508731,78511274,78513392,78515799,78519331,78521523,78522649,78526541,78534449,78536995,78539294,78540531	78058085,78066016,78237617,78245325,78252551,78255375,78265108,78266935,78267432,78278744,78281433,78282967,78284548,78286539,78308209,78315734,78317508,78318986,78333412,78337817,78363665,78364054,78369984,78372858,78374251,78375879,78379996,78384143,78387701,78400887,78407841,78413085,78419063,78422000,78424420,78429226,78430417,78432604,78438718,78439064,78441297,78445712,78446880,78448316,78450339,78451891,78452354,78464145,78464583,78466435,78470091,78472330,78473597,78475606,78478061,78479718,78481964,78482535,78489080,78496961,78499921,78507608,78509006,78511506,78513552,78516013,78519481,78521630,78522808,78526657,78534615,78537200,78539440,78544269	Gene ID= ENSG00000138759.18 TPM= 3.5 Transcript Type= protein_coding
chr4	78551581	78610451	78551581	78610451	+	transcript2593.chr4.nic@ANXA3	transcript2593.chr4.nic	protein_coding	78551581,78554436,78573180,78579027,78582177,78586260,78591544,78595381,78595794,78601510,78604277,78610056	78551859,78554488,78573267,78579121,78582290,78586350,78591623,78595437,78597414,78601568,78604399,78610451	Gene ID= ENSG00000138772.12 TPM= 40.87 Transcript Type= NA
chr4	78551747	78610415	78551747	78610415	+	ENST00000512884.5@ANXA3	ENST00000512884.5	protein_coding	78551747,78554436,78579027,78582177,78586260,78591544,78595381,78595794,78597319,78601510,78604277,78610056	78551859,78554488,78579121,78582290,78586350,78591623,78595437,78595887,78597414,78601568,78604399,78610415	Gene ID= ENSG00000138772.12 TPM= 2.34 Transcript Type= protein_coding
chr4	78911878	78939438	78911878	78939438	-	ENST00000512733.5@PAQR3	ENST00000512733.5	protein_coding	78939040,78935121,78930170,78926521,78923857,78911878	78939438,78935283,78930325,78926718,78923947,78920681	Gene ID= ENSG00000163291.14 TPM= 14.01 Transcript Type= protein_coding
chr4	79905571	80073189	79905571	80073189	-	transcript2629.chr4.nic@ANTXR2	transcript2629.chr4.nic	protein_coding	80072409,80071583,80069436,80055932,80055360,80055150,80054272,80035972,80033472,80031623,80018898,80008521,79984819,79983878,79978007,79977621,79907405,79905571	80073189,80071654,80069507,80056013,80055467,80055218,80054352,80036032,80033570,80031692,80018976,80008616,79984863,79983970,79978174,79977701,79907467,79906172	Gene ID= ENSG00000163297.16 TPM= 5.84 Transcript Type= NA
chr4	81030965	81057531	81030965	81057531	+	ENST00000282701.2@BMP3	ENST00000282701.2	protein_coding	81030965,81045738,81053345	81031600,81046648,81057531	Gene ID= ENSG00000152785.6 TPM= 40.87 Transcript Type= protein_coding
chr4	81427065	81471915	81427065	81471915	-	ENST00000264400.6@RASGEF1B	ENST00000264400.6	protein_coding	81471770,81459332,81457499,81456651,81448069,81447504,81445743,81445526,81442297,81440834,81434639,81433840,81432299,81427065	81471915,81459514,81457621,81456788,81448284,81447578,81445838,81445628,81442376,81440929,81434734,81433963,81432371,81427792	Gene ID= ENSG00000138670.17 TPM= 4.67 Transcript Type= protein_coding
chr4	82353829	82373999	82353829	82373999	-	transcript2673.chr4.nic@HNRNPD	transcript2673.chr4.nic	protein_coding	82373446,82359471,82358659,82357313,82356796,82355304,82353829	82373999,82359639,82358820,82357444,82356895,82355401,82354154	Gene ID= ENSG00000138668.18 TPM= 28.02 Transcript Type= NA
chr4	82353829	82374265	82353829	82374265	-	transcript2676.chr4.nic@HNRNPD	transcript2676.chr4.nic	protein_coding	82373446,82371528,82359471,82358659,82357313,82356796,82353829	82374265,82371584,82359639,82358820,82357444,82356895,82355401	Gene ID= ENSG00000138668.18 TPM= 9.34 Transcript Type= NA
chr4	82352498	82373956	82352498	82373956	-	ENST00000313899.11@HNRNPD	ENST00000313899.11	protein_coding	82373446,82371528,82359471,82358659,82357313,82356796,82356537,82355304,82352498	82373956,82371584,82359639,82358820,82357444,82356895,82356683,82355401,82354154	Gene ID= ENSG00000138668.18 TPM= 2.34 Transcript Type= protein_coding
chr4	82353829	82373986	82353829	82373986	-	ENST00000353341.8@HNRNPD	ENST00000353341.8	protein_coding	82373446,82371528,82359471,82358659,82357313,82356796,82355304,82353829	82373986,82371584,82359639,82358820,82357444,82356895,82355401,82354154	Gene ID= ENSG00000138668.18 TPM= 126.1 Transcript Type= protein_coding
chr4	82353834	82373983	82353834	82373983	-	ENST00000352301.8@HNRNPD	ENST00000352301.8	protein_coding	82373446,82359471,82358659,82357313,82356796,82356537,82355304,82353834	82373983,82359639,82358820,82357444,82356895,82356683,82355401,82354154	Gene ID= ENSG00000138668.18 TPM= 18.68 Transcript Type= protein_coding
chr4	82360675	82362494	82360675	82362494	+	transcript2682.chr4.nnic@NA	transcript2682.chr4.nnic	NA	82360675	82362494	Gene ID= novel_gene_chr4_2683 TPM= 2.34 Transcript Type= NA
chr4	82424629	82429441	82424629	82429441	-	ENST00000602300.5@HNRNPDL	ENST00000602300.5	protein_coding	82429248,82428278,82428018,82427433,82427190,82426463,82426037,82424629	82429441,82428446,82428179,82427564,82427304,82426633,82426129,82424883	Gene ID= ENSG00000152795.17 TPM= 101 Transcript Type= protein_coding
chr4	82424625	82429397	82424625	82429397	-	ENST00000507721.5@HNRNPDL	ENST00000507721.5	protein_coding	82429248,82428278,82428018,82427433,82427190,82426463,82424625	82429397,82428446,82428179,82427564,82427304,82426633,82426129	Gene ID= ENSG00000152795.17 TPM= 42.03 Transcript Type= protein_coding
chr4	82424629	82430401	82424629	82430401	-	ENST00000502762.4@HNRNPDL	ENST00000502762.4	protein_coding	82429248,82428278,82428018,82427433,82427190,82426463,82426037,82425563,82424629	82430401,82428446,82428179,82427564,82427304,82426633,82426129,82425667,82424883	Gene ID= ENSG00000152795.17 TPM= 20.43 Transcript Type= nonsense_mediated_decay
chr4	82430562	82461091	82430562	82461091	+	ENST00000273920.7@ENOPH1	ENST00000273920.7	protein_coding	82430562,82447920,82451043,82454722,82456915,82459981	82430913,82448021,82451245,82454854,82457038,82461091	Gene ID= ENSG00000145293.15 TPM= 100.41 Transcript Type= protein_coding
chr4	82430662	82461087	82430662	82461087	+	ENST00000505846.5@ENOPH1	ENST00000505846.5	protein_coding	82430662,82447920,82454722,82456915,82459981	82430884,82448021,82454854,82457038,82461087	Gene ID= ENSG00000145293.15 TPM= 2.34 Transcript Type= protein_coding
chr4	82430648	82461055	82430648	82461055	+	ENST00000509635.5@ENOPH1	ENST00000509635.5	protein_coding	82430648,82447920,82451043,82454722,82456915,82459981	82430884,82448021,82451245,82454854,82457038,82461055	Gene ID= ENSG00000145293.15 TPM= 1.17 Transcript Type= protein_coding
chr4	82629539	82798857	82629539	82798857	-	ENST00000319540.8@SCD5	ENST00000319540.8	protein_coding	82798306,82705283,82680707,82636591,82629539	82798857,82705413,82680912,82636823,82631517	Gene ID= ENSG00000145284.11 TPM= 22.18 Transcript Type= protein_coding
chr4	82659887	82798772	82659887	82798772	-	ENST00000273908.4@SCD5	ENST00000273908.4	protein_coding	82798306,82705283,82680707,82659887	82798772,82705413,82680912,82661077	Gene ID= ENSG00000145284.11 TPM= 1.17 Transcript Type= protein_coding
chr4	82818661	82891240	82818661	82891240	-	transcript2719.chr4.nic@SEC31A	transcript2719.chr4.nic	protein_coding	82891088,82881858,82880799,82878730,82875727,82874611,82871944,82870325,82867155,82866808,82864362,82863318,82862534,82861631,82857689,82856952,82854903,82853570,82851431,82848804,82844386,82842140,82830937,82829000,82827369,82824555,82821037,82818661	82891240,82881940,82880922,82878928,82875822,82874751,82872086,82870424,82867316,82866960,82864598,82863392,82862572,82861708,82857764,82857130,82855029,82853715,82851604,82848977,82844509,82842481,82830975,82829058,82827632,82824674,82821108,82819253	Gene ID= ENSG00000138674.16 TPM= 6.01 Transcript Type= NA
chr4	82818661	82891240	82818661	82891240	-	transcript2723.chr4.nic@SEC31A	transcript2723.chr4.nic	protein_coding	82891088,82881858,82880799,82878730,82875727,82874611,82871944,82870325,82867155,82866808,82864362,82863318,82862534,82857689,82856952,82854903,82853570,82851431,82848804,82844386,82842140,82830937,82829000,82827369,82824555,82821037,82818661	82891240,82881940,82880922,82878928,82875822,82874751,82872086,82870424,82867316,82866960,82864598,82863392,82862572,82857764,82857130,82855029,82853715,82851604,82848977,82844509,82842481,82830975,82829058,82827632,82824674,82821108,82819253	Gene ID= ENSG00000138674.16 TPM= 6.36 Transcript Type= NA
chr4	82818661	82891266	82818661	82891266	-	ENST00000395310.6@SEC31A	ENST00000395310.6	protein_coding	82891088,82881858,82880799,82878730,82875727,82874611,82871944,82870325,82867155,82866808,82864362,82863318,82862534,82861631,82857689,82856952,82854903,82853570,82851431,82848804,82844386,82842140,82829000,82827369,82824555,82821037,82818661	82891266,82881940,82880922,82878928,82875822,82874751,82872086,82870424,82867316,82866960,82864598,82863392,82862572,82861708,82857764,82857130,82855029,82853715,82851604,82848977,82844509,82842481,82829058,82827632,82824674,82821108,82819253	Gene ID= ENSG00000138674.16 TPM= 14.68 Transcript Type= protein_coding
chr4	82818661	82891240	82818661	82891240	-	transcript2729.chr4.nic@SEC31A	transcript2729.chr4.nic	protein_coding	82891088,82881858,82880799,82878730,82875727,82874611,82871944,82870325,82867155,82866808,82864362,82863318,82857689,82856952,82854903,82853570,82851431,82848804,82844386,82842140,82830937,82829000,82827369,82824555,82821037,82818661	82891240,82881940,82880922,82878928,82875822,82874751,82872086,82870424,82867316,82866960,82864598,82863392,82857764,82857130,82855029,82853715,82851604,82848977,82844509,82842481,82830975,82829058,82827632,82824674,82821108,82819253	Gene ID= ENSG00000138674.16 TPM= 6.95 Transcript Type= NA
chr4	82818661	82891240	82818661	82891240	-	transcript2732.chr4.nic@SEC31A	transcript2732.chr4.nic	protein_coding	82891088,82881858,82880799,82878730,82875727,82874611,82871944,82870325,82867155,82866808,82864362,82863318,82862534,82857689,82856952,82854903,82853570,82851431,82848804,82844386,82842140,82829000,82827369,82824555,82821037,82818661	82891240,82881940,82880922,82878928,82875822,82874751,82872086,82870424,82867316,82866960,82864598,82863392,82862572,82857764,82857130,82855029,82853715,82851604,82848977,82844509,82842481,82829058,82827632,82824674,82821108,82819253	Gene ID= ENSG00000138674.16 TPM= 12.11 Transcript Type= NA
chr4	82818662	82891259	82818662	82891259	-	ENST00000311785.11@SEC31A	ENST00000311785.11	protein_coding	82891088,82881858,82880799,82878730,82875727,82874611,82871944,82870325,82867155,82866808,82864362,82863318,82862534,82861631,82857689,82856952,82854903,82853570,82851431,82848804,82844386,82829000,82827369,82824555,82821037,82818662	82891259,82881940,82880922,82878928,82875822,82874751,82872086,82870424,82867316,82866960,82864598,82863392,82862572,82861708,82857764,82857130,82855029,82853715,82851604,82848977,82844509,82829058,82827632,82824674,82821108,82819253	Gene ID= ENSG00000138674.16 TPM= 45.41 Transcript Type= protein_coding
chr4	82818661	82891240	82818661	82891240	-	transcript2740.chr4.nic@SEC31A	transcript2740.chr4.nic	protein_coding	82891088,82881858,82880799,82878730,82875727,82874611,82871944,82870325,82867155,82866808,82864362,82863318,82862534,82857689,82856952,82854903,82853570,82851431,82848804,82844386,82829000,82827369,82824555,82821037,82818661	82891240,82881940,82880922,82878928,82875822,82874751,82872086,82870424,82867316,82866960,82864598,82863392,82862572,82857764,82857130,82855029,82853715,82851604,82848977,82844509,82829058,82827632,82824674,82821108,82819253	Gene ID= ENSG00000138674.16 TPM= 13.18 Transcript Type= NA
chr4	82818662	82891214	82818662	82891214	-	ENST00000509142.5@SEC31A	ENST00000509142.5	protein_coding	82891088,82881858,82880799,82878730,82875727,82874611,82871944,82870325,82867155,82866808,82864362,82863318,82862534,82861631,82857689,82856952,82854903,82853570,82851431,82848804,82844386,82829000,82827369,82824555,82821037,82818662	82891214,82881937,82880922,82878928,82875822,82874751,82872086,82870424,82867316,82866960,82864598,82863392,82862572,82861708,82857764,82857130,82855029,82853715,82851604,82848977,82844509,82829058,82827632,82824674,82821108,82819253	Gene ID= ENSG00000138674.16 TPM= 10.6 Transcript Type= protein_coding
chr4	82818661	82891153	82818661	82891153	-	ENST00000513858.5@SEC31A	ENST00000513858.5	protein_coding	82891088,82881858,82880799,82878730,82875727,82874611,82871944,82870325,82867155,82866808,82864362,82863318,82857689,82856952,82854903,82853570,82851431,82848804,82844386,82829000,82827369,82824555,82821037,82818661	82891153,82881940,82880922,82878928,82875822,82874751,82872086,82870424,82867316,82866960,82864598,82863392,82857764,82857130,82855029,82853715,82851604,82848977,82844509,82829058,82827632,82824674,82821108,82819253	Gene ID= ENSG00000138674.16 TPM= 20.06 Transcript Type= protein_coding
chr4	82818661	82891136	82818661	82891136	-	ENST00000348405.8@SEC31A	ENST00000348405.8	protein_coding	82891088,82881858,82880799,82878730,82875727,82874611,82871944,82870325,82867155,82866808,82864362,82863318,82857689,82856952,82854903,82853570,82851431,82848804,82844386,82842140,82829000,82827369,82824555,82821037,82818661	82891136,82881940,82880922,82878928,82875822,82874751,82872086,82870424,82867316,82866960,82864598,82863392,82857764,82857130,82855029,82853715,82851604,82848977,82844509,82842481,82829058,82827632,82824674,82821108,82819253	Gene ID= ENSG00000138674.16 TPM= 23.07 Transcript Type= protein_coding
chr4	82818662	82891266	82818662	82891266	-	ENST00000448323.5@SEC31A	ENST00000448323.5	protein_coding	82891088,82881858,82880799,82878730,82875727,82874611,82871944,82870325,82867155,82866808,82864362,82863318,82862534,82861631,82857689,82856952,82854903,82853570,82851431,82848804,82844386,82842140,82829000,82827369,82824555,82821037,82818662	82891266,82881937,82880922,82878928,82875822,82874751,82872086,82870424,82867316,82866960,82864598,82863392,82862572,82861708,82857764,82857130,82855029,82853715,82851604,82848977,82844509,82842481,82829058,82827632,82824674,82821108,82819253	Gene ID= ENSG00000138674.16 TPM= 7.39 Transcript Type= protein_coding
chr4	82822330	82824272	82822330	82824272	+	transcript2756.chr4.nnic@NA	transcript2756.chr4.nnic	NA	82822330	82824272	Gene ID= novel_gene_chr4_2757 TPM= 3.5 Transcript Type= NA
chr4	82893545	82900571	82893545	82900571	-	transcript2759.chr4.nic@THAP9-AS1	transcript2759.chr4.nic	antisense_RNA	82900334,82900077,82899713,82897989,82895692,82893545	82900571,82900223,82899737,82898062,82895774,82894847	Gene ID= ENSG00000251022.6 TPM= 2.34 Transcript Type= NA
chr4	82893009	82900960	82893009	82900960	-	ENST00000504520.6@THAP9-AS1	ENST00000504520.6	antisense_RNA	82900334,82900077,82897989,82895692,82893009	82900960,82900223,82898062,82895774,82894847	Gene ID= ENSG00000251022.6 TPM= 1.17 Transcript Type= antisense_RNA
chr4	82900752	82919969	82900752	82919969	+	ENST00000302236.9@THAP9	ENST00000302236.9	protein_coding	82900752,82904736,82906324,82907785,82916944	82900882,82904931,82906627,82907935,82919969	Gene ID= ENSG00000168152.12 TPM= 5.84 Transcript Type= protein_coding
chr4	82924603	83010829	82924603	83010829	-	ENST00000340417.7@LIN54	ENST00000340417.7	protein_coding	83010484,82984161,82978883,82970327,82946258,82939889,82939539,82938413,82937227,82936279,82935981,82930943,82924603	83010829,82984876,82979006,82970469,82946474,82939962,82939736,82938504,82937298,82936381,82936118,82931145,82928303	Gene ID= ENSG00000189308.10 TPM= 4.67 Transcript Type= protein_coding
chr4	82925548	83010821	82925548	83010821	-	ENST00000510877.5@LIN54	ENST00000510877.5	protein_coding	83010484,82984824,82978883,82970327,82946258,82939889,82939539,82938413,82937227,82936279,82935981,82930943,82925548	83010821,82984876,82979006,82970465,82946474,82939962,82939736,82938504,82937298,82936381,82936118,82931145,82928303	Gene ID= ENSG00000189308.10 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr4	82925715	83010731	82925715	83010731	-	ENST00000442461.6@LIN54	ENST00000442461.6	protein_coding	83010484,82984824,82978883,82970327,82946258,82939889,82939539,82938413,82937227,82936279,82935981,82930943,82925715	83010731,82984876,82979006,82970469,82946474,82939962,82939736,82938504,82937298,82936381,82936118,82931145,82928303	Gene ID= ENSG00000189308.10 TPM= 1.17 Transcript Type= protein_coding
chr4	83034447	83075789	83034447	83075789	+	ENST00000509093.5@COPS4	ENST00000509093.5	protein_coding	83034447,83045626,83049166,83049881,83056926,83057258,83063076,83066438,83075297	83035298,83045705,83049317,83049984,83057079,83057408,83063246,83066553,83075789	Gene ID= ENSG00000138663.8 TPM= 1.17 Transcript Type= protein_coding
chr4	83035090	83075818	83035090	83075818	+	ENST00000264389.6@COPS4	ENST00000264389.6	protein_coding	83035090,83045626,83049166,83049881,83056926,83057258,83063076,83066438,83068438,83075297	83035298,83045705,83049317,83049984,83057079,83057408,83063246,83066553,83068522,83075818	Gene ID= ENSG00000138663.8 TPM= 61.88 Transcript Type= protein_coding
chr4	83035225	83075756	83035225	83075756	+	ENST00000511653.1@COPS4	ENST00000511653.1	protein_coding	83035225,83045626,83049166,83049881,83056926,83057258,83063076,83066438,83068438,83073206,83075297	83035298,83045705,83049317,83049984,83057079,83057408,83063246,83066553,83068522,83073353,83075756	Gene ID= ENSG00000138663.8 TPM= 2.34 Transcript Type= protein_coding
chr4	83035207	83075797	83035207	83075797	+	ENST00000503682.5@COPS4	ENST00000503682.5	protein_coding	83035207,83045626,83049166,83049881,83056926,83057258,83063076,83065060,83066438,83068438,83075297	83035298,83045705,83049317,83049984,83057079,83057408,83063246,83065155,83066553,83068522,83075797	Gene ID= ENSG00000138663.8 TPM= 1.17 Transcript Type= protein_coding
chr4	83088285	83114777	83088285	83114777	-	transcript2791.chr4.nnic@PLAC8	transcript2791.chr4.nnic	protein_coding	83114666,83107804,83104896,83094678,83088285	83114777,83107950,83105020,83094793,83090971	Gene ID= ENSG00000145287.10 TPM= 126.1 Transcript Type= NA
chr4	83090048	83114802	83090048	83114802	-	ENST00000311507.8@PLAC8	ENST00000311507.8	protein_coding	83114666,83107804,83104896,83094678,83090048	83114802,83107950,83105020,83094791,83090971	Gene ID= ENSG00000145287.10 TPM= 7.01 Transcript Type= protein_coding
chr4	83263824	83284914	83263824	83284914	-	ENST00000311469.8@COQ2	ENST00000311469.8	protein_coding	83284512,83278948,83273496,83272087,83269860,83267586,83263824	83284914,83279114,83273617,83272172,83269993,83267774,83264363	Gene ID= ENSG00000173085.13 TPM= 23.35 Transcript Type= protein_coding
chr4	83266697	83284765	83266697	83284765	-	ENST00000311461.7@COQ2	ENST00000311461.7	protein_coding	83284512,83278948,83273496,83272087,83269860,83267586,83266697	83284765,83279114,83273617,83272172,83269993,83267774,83267208	Gene ID= ENSG00000173085.13 TPM= 1.17 Transcript Type= protein_coding
chr4	83292461	83334816	83292461	83334816	-	transcript2807.chr4.nnic@HPSE	transcript2807.chr4.nnic	protein_coding	83334556,83322219,83319344,83313114,83310722,83310031,83309402,83308845,83306203,83302150,83300960,83295048,83292461	83334816,83322364,83319469,83313287,83310890,83310078,83309495,83308951,83306317,83302268,83301106,83295503,83294102	Gene ID= ENSG00000173083.14 TPM= 2.34 Transcript Type= NA
chr4	83292461	83334882	83292461	83334882	-	ENST00000311412.9@HPSE	ENST00000311412.9	protein_coding	83334556,83322219,83319344,83313114,83310722,83310031,83309402,83308845,83306203,83302150,83300960,83292461	83334882,83322364,83319469,83313287,83310890,83310078,83309495,83308951,83306317,83302268,83301106,83295503	Gene ID= ENSG00000173083.14 TPM= 7.01 Transcript Type= protein_coding
chr4	83407373	83455843	83407373	83455843	-	transcript2811.chr4.nic@HELQ	transcript2811.chr4.nic	protein_coding	83455508,83453231,83448783,83446835,83446014,83443517,83441305,83439863,83436858,83432126,83431664,83429524,83427563,83425994,83421563,83418093,83416731,83407373	83455843,83453945,83448961,83447035,83446086,83443614,83441403,83440008,83437097,83432267,83431768,83429746,83427720,83426092,83421736,83418206,83416865,83407560	Gene ID= ENSG00000163312.10 TPM= 2.34 Transcript Type= NA
chr4	83407373	83455845	83407373	83455845	-	transcript2813.chr4.nic@HELQ	transcript2813.chr4.nic	protein_coding	83455269,83453231,83448783,83446014,83443517,83441305,83439863,83436858,83432126,83431664,83429524,83427563,83425994,83421563,83418093,83416731,83407373	83455845,83453945,83448961,83446086,83443614,83441403,83440008,83437097,83432267,83431768,83429746,83427720,83426092,83421736,83418206,83416865,83407560	Gene ID= ENSG00000163312.10 TPM= 2.34 Transcript Type= NA
chr4	83407343	83455856	83407343	83455856	-	ENST00000295488.7@HELQ	ENST00000295488.7	protein_coding	83455397,83453231,83448783,83446835,83446014,83443517,83441305,83439863,83436858,83432126,83431664,83429524,83427563,83425994,83421563,83418093,83416731,83407343	83455856,83453945,83448961,83447035,83446086,83443614,83441403,83440008,83437097,83432267,83431768,83429746,83427720,83426092,83421736,83418206,83416865,83407560	Gene ID= ENSG00000163312.10 TPM= 4.67 Transcript Type= protein_coding
chr4	83456055	83461237	83456055	83461237	+	ENST00000507349.5@MRPS18C	ENST00000507349.5	protein_coding	83456055,83456909,83460973,83461121	83456177,83456958,83461032,83461237	Gene ID= ENSG00000163319.10 TPM= 1.17 Transcript Type= protein_coding
chr4	83460945	83485158	83460945	83485158	-	transcript2817.chr4.nic@ABRAXAS1	transcript2817.chr4.nic	protein_coding	83484986,83483992,83482154,83476643,83472222,83470203,83469032,83467454,83463494,83460945	83485158,83484166,83482244,83476679,83472288,83470396,83469151,83467538,83463608,83462902	Gene ID= ENSG00000163322.13 TPM= 3.5 Transcript Type= NA
chr4	83459517	83485181	83459517	83485181	-	ENST00000321945.11@ABRAXAS1	ENST00000321945.11	protein_coding	83484986,83482154,83476643,83472222,83470203,83469032,83467454,83463494,83459517	83485181,83482244,83476679,83472288,83470396,83469151,83467538,83463608,83462902	Gene ID= ENSG00000163322.13 TPM= 9.34 Transcript Type= protein_coding
chr4	83480495	83485171	83480495	83485171	-	transcript2834.chr4.nnic@ABRAXAS1	transcript2834.chr4.nnic	protein_coding	83484986,83482154,83480495	83485171,83482244,83481124	Gene ID= ENSG00000163322.13 TPM= 2.34 Transcript Type= NA
chr4	83536108	83605875	83536108	83605875	+	ENST00000395226.6@GPAT3	ENST00000395226.6	protein_coding	83536108,83536504,83544536,83581562,83587255,83588210,83590199,83594845,83596858,83597430,83598051,83598644,83604668	83536206,83536763,83544602,83581832,83587329,83588299,83590292,83594960,83596913,83597515,83598179,83598723,83605875	Gene ID= ENSG00000138678.10 TPM= 10.51 Transcript Type= protein_coding
chr4	84527412	84583551	84527412	84583551	-	transcript2865.chr4.nnic@RPL3P13	transcript2865.chr4.nnic	processed_pseudogene	84583077,84557864,84538839,84538084,84530028,84527412	84583551,84557956,84538930,84538297,84530115,84528265	Gene ID= ENSG00000258013.2 TPM= 3.5 Transcript Type= NA
chr4	84532356	84534646	84532356	84534646	+	transcript2871.chr4.nnic@NA	transcript2871.chr4.nnic	NA	84532356	84534646	Gene ID= novel_gene_chr4_2872 TPM= 2.34 Transcript Type= NA
chr4	84551415	84556044	84551415	84556044	+	transcript2869.chr4.nnic@NA	transcript2869.chr4.nnic	NA	84551415	84556044	Gene ID= novel_gene_chr4_2870 TPM= 4.67 Transcript Type= NA
chr4	84579899	84582779	84579899	84582779	-	transcript2873.chr4.nnic@NA	transcript2873.chr4.nnic	NA	84579899	84582779	Gene ID= novel_gene_chr4_2874 TPM= 2.34 Transcript Type= NA
chr4	84582768	84651338	84582768	84651338	+	transcript2850.chr4.nnic@CDS1	transcript2850.chr4.nnic	protein_coding	84582768,84604243,84609429,84617564,84619394,84631819,84633857,84635264,84638924,84640838,84645222,84648557	84583518,84604370,84609525,84617661,84619533,84631877,84633939,84635351,84638992,84640990,84645325,84651338	Gene ID= ENSG00000163624.5 TPM= 7.01 Transcript Type= NA
chr4	84582979	84651338	84582979	84651338	+	ENST00000295887.5@CDS1	ENST00000295887.5	protein_coding	84582979,84604243,84609429,84617564,84619394,84631819,84633857,84635264,84638924,84640838,84643024,84645222,84648557	84583518,84604370,84609525,84617661,84619533,84631877,84633939,84635351,84638992,84640990,84643143,84645325,84651338	Gene ID= ENSG00000163624.5 TPM= 21.02 Transcript Type= protein_coding
chr4	84964690	84966960	84964690	84966960	-	transcript2884.chr4.nnic@NA	transcript2884.chr4.nnic	NA	84964690	84966960	Gene ID= novel_gene_chr4_2885 TPM= 2.34 Transcript Type= NA
chr4	85778706	86001223	85778706	86001223	+	ENST00000395183.6@ARHGAP24	ENST00000395183.6	protein_coding	85778706,85923648,85942066,85972036,85974888,85977570,85994583,86000479	85778965,85923770,85942273,85972168,85974961,85977691,85995657,86001223	Gene ID= ENSG00000138639.17 TPM= 7.01 Transcript Type= protein_coding
chr4	85930273	86002668	85930273	86002668	+	ENST00000264343.4@ARHGAP24	ENST00000264343.4	protein_coding	85930273,85942066,85972036,85974888,85977570,85994583,86000479	85931042,85942273,85972168,85974961,85977691,85995657,86002668	Gene ID= ENSG00000138639.17 TPM= 1.17 Transcript Type= protein_coding
chr4	86016478	86360014	86016478	86360014	-	ENST00000641317.1@MAPK10	ENST00000641317.1	protein_coding	86359658,86354530,86194309,86159298,86107223,86101894,86101052,86098524,86067773,86064266,86031368,86029197,86016478	86360014,86354644,86194407,86159467,86107352,86102032,86101217,86098595,86067955,86064390,86031431,86029274,86017375	Gene ID= ENSG00000109339.20 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr4	86594315	86815171	86594315	86815171	+	ENST00000436978.5@PTPN13	ENST00000436978.5	protein_coding	86594315,86635252,86672365,86686710,86689005,86693587,86701241,86716530,86717024,86722212,86732400,86732592,86734303,86734737,86735594,86741634,86744966,86750470,86751027,86753009,86758260,86758678,86758942,86762727,86764593,86765395,86766432,86767817,86769769,86770101,86771171,86772778,86774373,86775171,86775442,86780402,86782201,86784465,86785231,86785848,86796874,86799101,86803709,86805279,86807560,86809769,86811046,86814456	86594789,86635371,86672543,86686775,86689190,86693674,86701801,86716625,86717117,86722434,86732474,86732766,86734456,86734875,86735746,86741816,86745128,86750887,86751124,86753065,86758349,86758785,86759073,86763190,86764739,86765488,86766517,86767976,86769983,86770199,86771535,86772958,86774531,86775342,86775652,86780472,86782262,86784558,86785368,86785936,86796929,86799204,86803857,86805369,86807897,86809984,86811108,86815171	Gene ID= ENSG00000163629.12 TPM= 5.84 Transcript Type= protein_coding
chr4	86594315	86815157	86594315	86815157	+	ENST00000427191.6@PTPN13	ENST00000427191.6	protein_coding	86594315,86635252,86672365,86686710,86689005,86693587,86701241,86716530,86717024,86722212,86732400,86732592,86734303,86734737,86735594,86741634,86744966,86750470,86751027,86758260,86758678,86758942,86762727,86764593,86765395,86766432,86767817,86769769,86770101,86771171,86772778,86774373,86775171,86775442,86780402,86782201,86784465,86785231,86785848,86796874,86799101,86803709,86805279,86807560,86809769,86811046,86814456	86594789,86635371,86672543,86686775,86689190,86693674,86701801,86716625,86717117,86722434,86732474,86732766,86734456,86734875,86735746,86741816,86745128,86750887,86751124,86758349,86758785,86759073,86763190,86764724,86765488,86766517,86767976,86769983,86770199,86771535,86772958,86774531,86775342,86775652,86780472,86782262,86784558,86785368,86785936,86796929,86799204,86803857,86805369,86807897,86809984,86811108,86815157	Gene ID= ENSG00000163629.12 TPM= 16.35 Transcript Type= protein_coding
chr4	86594315	86693093	86594315	86693093	+	transcript2905.chr4.nic@PTPN13	transcript2905.chr4.nic	protein_coding	86594315,86635252,86672365,86686710,86689005	86594789,86635371,86672543,86686775,86693093	Gene ID= ENSG00000163629.12 TPM= 3.5 Transcript Type= NA
chr4	86642451	86645180	86642451	86645180	-	transcript2907.chr4.nnic@NA	transcript2907.chr4.nnic	NA	86642451	86645180	Gene ID= novel_gene_chr4_2908 TPM= 2.34 Transcript Type= NA
chr4	86767244	86769007	86767244	86769007	-	transcript2909.chr4.nnic@NA	transcript2909.chr4.nnic	NA	86767244	86769007	Gene ID= novel_gene_chr4_2910 TPM= 2.34 Transcript Type= NA
chr4	86925867	86936179	86925867	86936179	-	ENST00000506484.1@C4orf36	ENST00000506484.1	protein_coding	86935988,86933395,86932222,86925867	86936179,86933542,86932319,86926326	Gene ID= ENSG00000163633.10 TPM= 1.17 Transcript Type= retained_intron
chr4	87006988	87141038	87006988	87141038	+	ENST00000307808.10@AFF1	ENST00000307808.10	protein_coding	87006988,87046166,87046695,87084120,87089984,87091793,87094915,87105628,87105808,87108159,87114367,87125037,87126099,87127026,87127643,87131083,87131793,87132271,87134474,87135580	87007424,87046286,87047594,87084164,87090070,87091829,87094969,87105682,87105845,87108315,87115299,87125143,87126336,87127117,87127703,87131219,87131864,87132408,87134694,87141038	Gene ID= ENSG00000172493.20 TPM= 22.18 Transcript Type= protein_coding
chr4	87115611	87120666	87115611	87120666	-	transcript2915.chr4.nnic@NA	transcript2915.chr4.nnic	NA	87115611	87120666	Gene ID= novel_gene_chr4_2916 TPM= 21.02 Transcript Type= NA
chr4	87161043	87220551	87161043	87220551	-	transcript2920.chr4.nnic@KLHL8	transcript2920.chr4.nnic	protein_coding	87220418,87195324,87185251,87183203,87178477,87176757,87170447,87170079,87163878,87161043	87220551,87195690,87185799,87183389,87178602,87176868,87170615,87170238,87164079,87163642	Gene ID= ENSG00000145332.13 TPM= 2.34 Transcript Type= NA
chr4	87303789	87322906	87303789	87322906	-	ENST00000328546.4@HSD17B13	ENST00000328546.4	protein_coding	87322632,87318329,87317092,87315493,87313823,87310243,87303789	87322906,87318436,87317223,87315599,87313960,87310359,87305308	Gene ID= ENSG00000170509.11 TPM= 1.17 Transcript Type= protein_coding
chr4	87336610	87391386	87336610	87391386	-	ENST00000358290.8@HSD17B11	ENST00000358290.8	protein_coding	87390861,87382255,87374699,87372709,87357279,87340490,87336610	87391386,87382362,87374830,87372815,87357416,87340606,87337366	Gene ID= ENSG00000198189.10 TPM= 163.46 Transcript Type= protein_coding
chr4	87422582	87458345	87422582	87458345	+	ENST00000302174.8@NUDT9	ENST00000302174.8	protein_coding	87422582,87434981,87438277,87441829,87449142,87451589,87454371,87457843	87423012,87435220,87438372,87441915,87449253,87451735,87454455,87458345	Gene ID= ENSG00000170502.12 TPM= 77.06 Transcript Type= protein_coding
chr4	87473335	87529504	87473335	87529504	-	ENST00000282470.10@SPARCL1	ENST00000282470.10	protein_coding	87529045,87499521,87494981,87493582,87491618,87490760,87490273,87482424,87480372,87479430,87473335	87529504,87499585,87495127,87494598,87491690,87490878,87490393,87482560,87480520,87479578,87473803	Gene ID= ENSG00000152583.12 TPM= 807.39 Transcript Type= protein_coding
chr4	87975688	87983297	87975688	87983297	+	ENST00000395080.7@SPP1	ENST00000395080.7	protein_coding	87975688,87976882,87977059,87980046,87980393,87981475,87982492	87975800,87976949,87977097,87980126,87980434,87981798,87983297	Gene ID= ENSG00000118785.13 TPM= 33.86 Transcript Type= protein_coding
chr4	88007586	88077777	88007586	88077777	+	transcript2974.chr4.nnic@PKD2	transcript2974.chr4.nnic	protein_coding	88007586,88019458,88036220,88038251,88046642,88051991,88056086,88057983,88061906,88065374,88065762,88067898,88074812,88075458	88008328,88019571,88036353,88038501,88046870,88052158,88056267,88058103,88062004,88065495,88065879,88068061,88074959,88077777	Gene ID= ENSG00000118762.7 TPM= 7.01 Transcript Type= NA
chr4	88007586	88044896	88007586	88044896	+	transcript2980.chr4.nic@PKD2	transcript2980.chr4.nic	protein_coding	88007586,88019458,88036220,88038251,88043233	88008328,88019571,88036353,88038501,88044896	Gene ID= ENSG00000118762.7 TPM= 7.01 Transcript Type= NA
chr4	88007668	88077777	88007668	88077777	+	ENST00000237596.6@PKD2	ENST00000237596.6	protein_coding	88007668,88019458,88036220,88038251,88043233,88046642,88051991,88056086,88057983,88061906,88065374,88065762,88067898,88074812,88075458	88008328,88019571,88036353,88038501,88043457,88046870,88052158,88056267,88058103,88062004,88065495,88065879,88068061,88074959,88077777	Gene ID= ENSG00000118762.7 TPM= 58.38 Transcript Type= protein_coding
chr4	88090269	88158912	88090269	88158912	-	ENST00000237612.7@ABCG2	ENST00000237612.7	protein_coding	88158386,88139793,88132576,88131803,88131061,88121635,88118109,88114957,88113303,88107184,88101230,88099324,88097453,88095520,88094577,88090269	88158912,88140014,88132635,88131917,88131213,88121792,88118260,88115058,88113553,88107266,88101319,88099448,88097607,88095609,88094659,88092381	Gene ID= ENSG00000118777.10 TPM= 4.67 Transcript Type= protein_coding
chr4	88091686	88158678	88091686	88158678	-	transcript2991.chr4.nic@ABCG2	transcript2991.chr4.nic	protein_coding	88158577,88139793,88132576,88131803,88131061,88121635,88118109,88114957,88113303,88107184,88101230,88099324,88097453,88095520,88094577,88091686	88158678,88140014,88132635,88131917,88131213,88121792,88118260,88115058,88113553,88107266,88101319,88099448,88097607,88095609,88094659,88092381	Gene ID= ENSG00000118777.10 TPM= 3.5 Transcript Type= NA
chr4	88257620	88284736	88257620	88284736	-	ENST00000608933.5@PPM1K	ENST00000608933.5	protein_coding	88284406,88278144,88277143,88268741,88268190,88265001,88257620	88284736,88278642,88277243,88268906,88268334,88265135,88262726	Gene ID= ENSG00000163644.14 TPM= 8.17 Transcript Type= protein_coding
chr4	88378741	88443097	88378741	88443097	+	transcript3011.chr4.nnic@HERC6	transcript3011.chr4.nnic	protein_coding	88378741,88383221,88385499,88390652,88393488,88396015,88396851,88398142,88398397,88404876,88405554,88408524,88413077,88417425,88423860,88424595,88428580,88431162,88435725,88436905,88437711,88439874,88440148,88442234	88379120,88383380,88385575,88390879,88393582,88396142,88396987,88398209,88398444,88404997,88405613,88408617,88413266,88417579,88423973,88424702,88428750,88431305,88435891,88436971,88437781,88440057,88440250,88443097	Gene ID= ENSG00000138642.14 TPM= 4.29 Transcript Type= NA
chr4	88378863	88443111	88378863	88443111	+	ENST00000264346.11@HERC6	ENST00000264346.11	protein_coding	88378863,88383221,88385499,88390652,88393488,88396015,88396851,88398142,88404876,88405554,88408524,88413077,88417425,88423860,88424595,88428580,88431162,88435725,88436905,88437711,88439874,88440148,88442234	88379120,88383380,88385575,88390879,88393582,88396142,88396987,88398209,88404997,88405613,88408617,88413266,88417579,88423973,88424702,88428750,88431305,88435891,88436971,88437781,88440057,88440250,88443111	Gene ID= ENSG00000138642.14 TPM= 22.97 Transcript Type= protein_coding
chr4	88378739	88443097	88378739	88443097	+	ENST00000380265.9@HERC6	ENST00000380265.9	protein_coding	88378739,88383221,88385499,88390652,88393488,88396015,88396851,88398142,88404876,88405554,88408524,88413077,88417425,88423860,88428580,88431162,88435725,88436905,88437711,88439874,88440148,88442234	88379120,88383380,88385575,88390879,88393582,88396142,88396987,88398209,88404997,88405613,88408617,88413266,88417579,88423973,88428750,88431305,88435891,88436971,88437781,88440057,88440250,88443097	Gene ID= ENSG00000138642.14 TPM= 1.95 Transcript Type= protein_coding
chr4	88457085	88506161	88457085	88506161	+	transcript3020.chr4.nnic@HERC5	transcript3020.chr4.nnic	protein_coding	88457085,88459347,88460095,88462135,88463532,88463855,88467059,88468346,88469157,88470614,88472409,88475841,88479353,88486115,88487069,88489166,88493012,88494165,88504232,88504495,88505673	88457534,88459470,88460171,88462356,88463623,88463985,88467204,88468422,88469260,88470673,88472502,88476030,88479507,88486228,88487179,88489336,88493155,88494331,88504415,88504597,88506161	Gene ID= ENSG00000138646.8 TPM= 3.5 Transcript Type= NA
chr4	88457117	88506163	88457117	88506163	+	ENST00000264350.7@HERC5	ENST00000264350.7	protein_coding	88457117,88459347,88460095,88462135,88463532,88463855,88467059,88468346,88469157,88470614,88472409,88475841,88479353,88486115,88487069,88489166,88493012,88494165,88499926,88500915,88504232,88504495,88505673	88457534,88459470,88460171,88462356,88463623,88463985,88467204,88468422,88469260,88470673,88472502,88476030,88479507,88486228,88487179,88489336,88493155,88494331,88499992,88500985,88504415,88504597,88506163	Gene ID= ENSG00000138646.8 TPM= 56.04 Transcript Type= protein_coding
chr4	88520985	88523813	88520985	88523813	-	ENST00000273968.4@PYURF	ENST00000273968.4	protein_coding	88523498,88520985	88523813,88522029	Gene ID= ENSG00000145337.4 TPM= 279.05 Transcript Type= protein_coding
chr4	88592445	88708541	88592445	88708541	+	transcript3025.chr4.nnic@HERC3	transcript3025.chr4.nnic	protein_coding	88592445,88595557,88605795,88649840,88652012,88652869,88654042,88655174,88655875,88658415,88662431,88664153,88665855,88667377,88667892,88669860,88670139,88676218,88676334,88677964,88680093,88681159,88686736,88687217,88704098,88704508,88706752	88592574,88595614,88606049,88649999,88652088,88653090,88654133,88655304,88656035,88658491,88662555,88664212,88665950,88667488,88668081,88670023,88670252,88676241,88676423,88678134,88680236,88681325,88686802,88687299,88704281,88704610,88708541	Gene ID= ENSG00000138641.15 TPM= 9.34 Transcript Type= NA
chr4	88592423	88708542	88592423	88708542	+	ENST00000402738.5@HERC3	ENST00000402738.5	protein_coding	88592423,88595557,88605795,88649840,88652012,88652869,88654042,88655174,88655875,88658415,88662431,88664153,88667377,88667892,88669860,88670139,88676218,88676334,88677964,88680093,88681159,88686736,88687217,88704098,88704508,88706752	88592574,88595614,88606049,88649999,88652088,88653090,88654133,88655304,88656035,88658491,88662555,88664212,88667488,88668081,88670023,88670252,88676241,88676423,88678134,88680236,88681325,88686802,88687299,88704281,88704610,88708542	Gene ID= ENSG00000138641.15 TPM= 14.01 Transcript Type= protein_coding
chr4	88695915	88698235	88695915	88698235	-	ENST00000323061.5@NAP1L5	ENST00000323061.5	protein_coding	88695915	88698235	Gene ID= ENSG00000177432.6 TPM= 7.01 Transcript Type= protein_coding
chr4	88726361	88750945	88726361	88750945	-	transcript3041.chr4.nic@FAM13A	transcript3041.chr4.nic	protein_coding	88750424,88749771,88748952,88747631,88746932,88739030,88737472,88732002,88731327,88726361	88750945,88749909,88749033,88747851,88747015,88739125,88737555,88732198,88731428,88728659	Gene ID= ENSG00000138640.14 TPM= 4.67 Transcript Type= NA
chr4	88771153	88774668	88771153	88774668	-	transcript3046.chr4.nnic@NA	transcript3046.chr4.nnic	NA	88771153	88774668	Gene ID= novel_gene_chr4_3047 TPM= 2.34 Transcript Type= NA
chr4	89111500	89114899	89111500	89114899	+	ENST00000603357.2@TIGD2	ENST00000603357.2	protein_coding	89111500,89112067	89111883,89114899	Gene ID= ENSG00000180346.3 TPM= 11.68 Transcript Type= protein_coding
chr4	89238857	89248061	89238857	89248061	-	transcript3058.chr4.nnic@NA	transcript3058.chr4.nnic	NA	89238857	89248061	Gene ID= novel_gene_chr4_3059 TPM= 12.84 Transcript Type= NA
chr4	89726053	89837139	89726053	89837139	-	ENST00000394986.5@SNCA	ENST00000394986.5	protein_coding	89836743,89835547,89828143,89822246,89729194,89726053	89837139,89835692,89828184,89822388,89729277,89726660	Gene ID= ENSG00000145335.15 TPM= 3.5 Transcript Type= protein_coding
chr4	89726053	89837228	89726053	89837228	-	ENST00000394991.7@SNCA	ENST00000394991.7	protein_coding	89836962,89835547,89828143,89822246,89729194,89726053	89837228,89835692,89828184,89822388,89729277,89726660	Gene ID= ENSG00000145335.15 TPM= 4.67 Transcript Type= protein_coding
chr4	89879532	89954629	89879532	89954629	+	ENST00000394980.5@MMRN1	ENST00000394980.5	protein_coding	89879532,89894724,89909276,89911944,89923168,89927795,89934810,89951605,89952997	89879602,89895594,89909395,89912050,89923272,89927968,89936798,89951751,89954629	Gene ID= ENSG00000138722.9 TPM= 88.15 Transcript Type= protein_coding
chr4	89894901	89954627	89894901	89954627	+	ENST00000264790.6@MMRN1	ENST00000264790.6	protein_coding	89894901,89909276,89911944,89923168,89927795,89934810,89951605,89952997	89895594,89909395,89912050,89923272,89927968,89936798,89951751,89954627	Gene ID= ENSG00000138722.9 TPM= 12.26 Transcript Type= protein_coding
chr4	90127596	90470781	90127596	90470781	+	transcript3081.chr4.nic@CCSER1	transcript3081.chr4.nic	protein_coding	90127596,90308244,90312863,90400036,90468234	90127831,90309608,90313047,90400129,90470781	Gene ID= ENSG00000184305.14 TPM= 2.34 Transcript Type= NA
chr4	94207611	94291290	94207611	94291290	+	ENST00000359052.8@SMARCAD1	ENST00000359052.8	protein_coding	94207611,94208346,94226119,94233954,94236952,94240906,94249654,94250752,94252616,94264707,94270728,94273617,94274738,94274890,94276339,94277022,94278422,94278616,94278923,94280592,94281472,94283121,94284960,94289473	94207735,94208584,94226296,94234122,94237018,94241006,94249755,94250833,94253007,94264906,94270818,94273716,94274797,94274965,94276474,94277159,94278517,94278733,94279050,94280780,94281590,94283303,94285069,94291290	Gene ID= ENSG00000163104.17 TPM= 3.5 Transcript Type= protein_coding
chr4	94207845	94290821	94207845	94290821	+	ENST00000457823.6@SMARCAD1	ENST00000457823.6	protein_coding	94207845,94208346,94226119,94233954,94236952,94240906,94249654,94250752,94252616,94264707,94270728,94273617,94274738,94274890,94276339,94277022,94278422,94278616,94278923,94280592,94281472,94283121,94284960,94289473	94208070,94208584,94226296,94234122,94237018,94241006,94249755,94250833,94253007,94264906,94270818,94273716,94274797,94274965,94276474,94277159,94278517,94278733,94279050,94280780,94281590,94283303,94285069,94290821	Gene ID= ENSG00000163104.17 TPM= 4.67 Transcript Type= protein_coding
chr4	94239564	94242189	94239564	94242189	-	transcript3096.chr4.nnic@NA	transcript3096.chr4.nnic	NA	94239564	94242189	Gene ID= novel_gene_chr4_3097 TPM= 2.34 Transcript Type= NA
chr4	94298535	94342876	94298535	94342876	-	ENST00000295256.9@HPGDS	ENST00000295256.9	protein_coding	94342795,94334497,94317873,94308634,94302146,94298535	94342876,94334638,94317965,94308743,94302244,94299644	Gene ID= ENSG00000163106.10 TPM= 4.67 Transcript Type= protein_coding
chr4	94451859	94665501	94451859	94665501	+	transcript3104.chr4.nic@PDLIM5	transcript3104.chr4.nic	protein_coding	94451859,94455247,94523724,94573351,94575616,94584986,94585565,94586408,94618004,94640276,94654460,94657427,94662422,94663978	94451995,94455384,94523875,94573393,94576034,94585003,94585737,94586444,94618191,94640450,94654640,94657547,94662537,94665501	Gene ID= ENSG00000163110.14 TPM= 3.3 Transcript Type= NA
chr4	94451857	94588216	94451857	94588216	+	ENST00000380180.7@PDLIM5	ENST00000380180.7	protein_coding	94451857,94455247,94523724,94573351,94575943,94584986,94585565,94586408,94586989	94451995,94455384,94523875,94573393,94576034,94585003,94585737,94586444,94588216	Gene ID= ENSG00000163110.14 TPM= 2.34 Transcript Type= protein_coding
chr4	94451935	94549986	94451935	94549986	+	transcript3119.chr4.nic@PDLIM5	transcript3119.chr4.nic	protein_coding	94451935,94455247,94523724,94549794	94451995,94455384,94523875,94549986	Gene ID= ENSG00000163110.14 TPM= 2.34 Transcript Type= NA
chr4	94451902	94668223	94451902	94668223	+	ENST00000317968.8@PDLIM5	ENST00000317968.8	protein_coding	94451902,94455247,94523724,94573351,94575616,94585565,94586408,94618004,94640276,94654460,94657427,94662422,94663978	94451995,94455384,94523875,94573393,94576034,94585737,94586444,94618191,94640450,94654640,94657547,94662537,94668223	Gene ID= ENSG00000163110.14 TPM= 31.91 Transcript Type= protein_coding
chr4	94451956	94665500	94451956	94665500	+	ENST00000542407.5@PDLIM5	ENST00000542407.5	protein_coding	94451956,94455247,94523724,94573351,94575943,94585565,94586408,94618004,94640276,94654460,94657427,94662422,94663978	94451995,94455384,94523875,94573393,94576034,94585737,94586444,94618191,94640450,94654640,94657547,94662537,94665500	Gene ID= ENSG00000163110.14 TPM= 6.81 Transcript Type= protein_coding
chr4	98261453	98443861	98261453	98443861	+	ENST00000408927.7@RAP1GDS1	ENST00000408927.7	protein_coding	98261453,98293408,98343139,98352476,98379017,98391952,98404477,98416745,98417367,98418657,98420019,98421255,98433936,98436940,98441990	98261569,98293515,98343261,98352601,98379163,98392080,98404602,98416888,98417498,98418791,98420144,98421394,98434062,98437068,98443861	Gene ID= ENSG00000138698.14 TPM= 8.17 Transcript Type= protein_coding
chr4	98470367	98658600	98470367	98658600	-	transcript3146.chr4.nic@TSPAN5	transcript3146.chr4.nic	protein_coding	98658146,98507678,98486738,98484399,98482005,98478685,98476413,98476189,98470367	98658600,98507728,98486884,98484598,98482175,98478810,98476460,98476305,98472587	Gene ID= ENSG00000168785.7 TPM= 2.63 Transcript Type= NA
chr4	98470367	98658640	98470367	98658640	-	transcript3150.chr4.nnic@TSPAN5	transcript3150.chr4.nnic	protein_coding	98658146,98507678,98482005,98478685,98476413,98476189,98470367	98658640,98507728,98482175,98478810,98476460,98476305,98472587	Gene ID= ENSG00000168785.7 TPM= 3.79 Transcript Type= NA
chr4	98470367	98658629	98470367	98658629	-	ENST00000305798.7@TSPAN5	ENST00000305798.7	protein_coding	98658146,98507678,98486738,98482005,98478685,98476413,98476189,98470367	98658629,98507728,98486884,98482175,98478810,98476460,98476305,98472587	Gene ID= ENSG00000168785.7 TPM= 28.31 Transcript Type= protein_coding
chr4	98470367	98658570	98470367	98658570	-	ENST00000508798.5@TSPAN5	ENST00000508798.5	protein_coding	98658146,98507678,98486738,98482005,98478685,98476413,98476189,98470367	98658570,98507728,98486884,98482175,98478746,98476460,98476305,98472587	Gene ID= ENSG00000168785.7 TPM= 4.96 Transcript Type= nonsense_mediated_decay
chr4	98871684	98930637	98871684	98930637	-	ENST00000450253.6@EIF4E	ENST00000450253.6	protein_coding	98929095,98901876,98891237,98887889,98887079,98884922,98871684	98930637,98901982,98891332,98887952,98887192,98885061,98881142	Gene ID= ENSG00000151247.12 TPM= 8.17 Transcript Type= protein_coding
chr4	98995620	99062813	98995620	99062813	+	ENST00000296411.10@METAP1	ENST00000296411.10	protein_coding	98995620,99028867,99034230,99035400,99039374,99041043,99043249,99045179,99048733,99057753,99061154	98995867,99028918,99034342,99035460,99039465,99041126,99043387,99045310,99048876,99057818,99062813	Gene ID= ENSG00000164024.11 TPM= 46.7 Transcript Type= protein_coding
chr4	99070978	99088751	99070978	99088751	-	ENST00000296412.12@ADH5	ENST00000296412.12	protein_coding	99088689,99085115,99081975,99081365,99076704,99076292,99074914,99072573,99070978	99088751,99085216,99082116,99081452,99076923,99076552,99075049,99072711,99072441	Gene ID= ENSG00000197894.10 TPM= 24.52 Transcript Type= protein_coding
chr4	99304870	99306263	99304870	99306263	-	transcript3204.chr4.nnic@NA	transcript3204.chr4.nnic	NA	99304870	99306263	Gene ID= novel_gene_chr4_3205 TPM= 2.34 Transcript Type= NA
chr4	99307243	99321398	99307243	99321398	-	ENST00000515694.4@ADH1B	ENST00000515694.4	protein_coding	99321314,99318785,99318046,99316215,99315898,99313821,99311521,99310765,99307243	99321398,99320914,99318184,99316302,99316117,99314081,99311656,99310903,99307864	Gene ID= ENSG00000196616.13 TPM= 8.17 Transcript Type= retained_intron
chr4	99306502	99321399	99306502	99321399	-	transcript3199.chr4.nic@ADH1B	transcript3199.chr4.nic	protein_coding	99321314,99318785,99318046,99315898,99313821,99311521,99310765,99306502	99321399,99318886,99318184,99316302,99314081,99311656,99310903,99307864	Gene ID= ENSG00000196616.13 TPM= 32.69 Transcript Type= NA
chr4	99336492	99353027	99336492	99353027	-	ENST00000515683.5@ADH1C	ENST00000515683.5	protein_coding	99352658,99347745,99347006,99345179,99344862,99342795,99340575,99339577,99336492	99353027,99347846,99347144,99345266,99345081,99343055,99340710,99339715,99336776	Gene ID= ENSG00000248144.5 TPM= 1.17 Transcript Type= protein_coding
chr4	99546709	99564017	99546709	99564017	-	ENST00000394877.7@TRMT10A	ENST00000394877.7	protein_coding	99563913,99559154,99558049,99557345,99556146,99553785,99550885,99546709	99564017,99559350,99558211,99557416,99556220,99553934,99550990,99549356	Gene ID= ENSG00000145331.13 TPM= 2.34 Transcript Type= protein_coding
chr4	99546727	99563668	99546727	99563668	-	ENST00000273962.7@TRMT10A	ENST00000273962.7	protein_coding	99563368,99559154,99558049,99557345,99556146,99553785,99550885,99546727	99563668,99559350,99558211,99557416,99556220,99553934,99550990,99549356	Gene ID= ENSG00000145331.13 TPM= 1.17 Transcript Type= protein_coding
chr4	99548613	99564032	99548613	99564032	-	ENST00000394876.6@TRMT10A	ENST00000394876.6	protein_coding	99563913,99559154,99558049,99557345,99556146,99553785,99550885,99548613	99564032,99559361,99558211,99557416,99556220,99553934,99550990,99549356	Gene ID= ENSG00000145331.13 TPM= 1.17 Transcript Type= protein_coding
chr4	99881207	99894376	99881207	99894376	-	ENST00000226522.8@LAMTOR3	ENST00000226522.8	protein_coding	99894335,99893955,99892000,99887296,99885542,99884062,99881207	99894376,99894000,99892034,99887354,99885654,99884125,99882067	Gene ID= ENSG00000109270.12 TPM= 19.85 Transcript Type= protein_coding
chr4	99899542	99946602	99899542	99946602	-	transcript3234.chr4.nic@DNAJB14	transcript3234.chr4.nic	protein_coding	99946439,99930450,99928542,99927717,99923040,99908711,99906517,99905597,99903726,99899542	99946602,99930621,99928617,99927838,99923185,99908896,99906611,99905706,99903898,99901152	Gene ID= ENSG00000164031.16 TPM= 3.5 Transcript Type= NA
chr4	99896248	99946726	99896248	99946726	-	ENST00000442697.6@DNAJB14	ENST00000442697.6	protein_coding	99946439,99930450,99923040,99908711,99906517,99905597,99903726,99896248	99946726,99930621,99923185,99908896,99906611,99905706,99903898,99901152	Gene ID= ENSG00000164031.16 TPM= 36.2 Transcript Type= protein_coding
chr4	99923681	99946574	99923681	99946574	-	ENST00000471738.1@DNAJB14	ENST00000471738.1	protein_coding	99946439,99930450,99924760,99923681	99946574,99930621,99924815,99923877	Gene ID= ENSG00000164031.16 TPM= 2.34 Transcript Type= processed_transcript
chr4	99924307	99946586	99924307	99946586	-	ENST00000469942.1@DNAJB14	ENST00000469942.1	protein_coding	99946439,99924307	99946586,99930621	Gene ID= ENSG00000164031.16 TPM= 2.34 Transcript Type= retained_intron
chr4	99948084	99950275	99948084	99950275	-	transcript3250.chr4.nnic@NA	transcript3250.chr4.nnic	NA	99948084	99950275	Gene ID= novel_gene_chr4_3251 TPM= 2.34 Transcript Type= NA
chr4	99948088	99950388	99948088	99950388	-	ENST00000296417.5@H2AFZ	ENST00000296417.5	protein_coding	99950168,99949663,99949273,99948811,99948088	99950388,99949740,99949386,99948940,99948523	Gene ID= ENSG00000164032.11 TPM= 129.6 Transcript Type= protein_coding
chr4	99948088	99950299	99948088	99950299	-	ENST00000511203.1@H2AFZ	ENST00000511203.1	protein_coding	99949273,99948088	99950299,99948940	Gene ID= ENSG00000164032.11 TPM= 1.17 Transcript Type= retained_intron
chr4	101025318	101347562	101025318	101347562	-	transcript3265.chr4.nnic@PPP3CA	transcript3265.chr4.nnic	protein_coding	101347289,101346739,101195916,101108954,101099611,101098367,101093776,101083186,101080532,101063232,101061087,101040482,101032267,101029166,101025318	101347562,101347041,101196116,101109078,101099722,101098512,101093915,101083263,101080626,101063357,101061161,101040566,101032364,101029195,101026061	Gene ID= ENSG00000138814.16 TPM= 2.34 Transcript Type= NA
chr4	101105151	101347527	101105151	101347527	-	transcript3273.chr4.nic@PPP3CA	transcript3273.chr4.nic	protein_coding	101346739,101195916,101105151	101347527,101196116,101109078	Gene ID= ENSG00000138814.16 TPM= 4.67 Transcript Type= NA
chr4	101023430	101347480	101023430	101347480	-	ENST00000394854.7@PPP3CA	ENST00000394854.7	protein_coding	101346739,101195916,101108954,101099611,101098367,101093776,101083186,101080532,101063232,101061087,101040482,101032267,101029166,101023430	101347480,101196116,101109078,101099722,101098512,101093915,101083263,101080626,101063357,101061161,101040566,101032364,101029195,101026061	Gene ID= ENSG00000138814.16 TPM= 21.02 Transcript Type= protein_coding
chr4	101790607	102074739	101790607	102074739	+	ENST00000322953.8@BANK1	ENST00000322953.8	protein_coding	101790607,101829808,101855035,101862526,101870505,101895305,101917993,102021514,102025201,102029960,102043839,102060211,102063075,102071275,102072345,102073684,102074005	101790950,101830206,101855189,101862664,101870644,101895410,101918189,102021592,102025509,102030265,102043907,102060389,102063138,102071304,102072400,102073748,102074739	Gene ID= ENSG00000153064.11 TPM= 7.01 Transcript Type= protein_coding
chr4	101790607	102074810	101790607	102074810	+	ENST00000428908.5@BANK1	ENST00000428908.5	protein_coding	101790607,101855035,101862526,101870505,101895305,101917993,102021514,102025201,102029960,102043839,102060211,102063075,102071275,102072345,102073684,102074005	101790950,101855189,101862664,101870644,101895410,101918189,102021592,102025509,102030265,102043907,102060389,102063138,102071304,102072400,102073748,102074810	Gene ID= ENSG00000153064.11 TPM= 2.34 Transcript Type= protein_coding
chr4	102227358	102229134	102227358	102229134	+	transcript3282.chr4.nnic@NA	transcript3282.chr4.nnic	NA	102227358	102229134	Gene ID= novel_gene_chr4_3283 TPM= 3.5 Transcript Type= NA
chr4	102261666	102345485	102261666	102345485	-	transcript3308.chr4.nnic@SLC39A8	transcript3308.chr4.nnic	protein_coding	102345345,102344444,102315668,102307436,102304989,102304317,102267872,102267490,102261666	102345485,102344841,102315830,102307605,102305111,102304481,102268079,102267674,102263193	Gene ID= ENSG00000138821.12 TPM= 73.59 Transcript Type= NA
chr4	102261666	102345474	102261666	102345474	-	ENST00000356736.4@SLC39A8	ENST00000356736.4	protein_coding	102345345,102344444,102315668,102307436,102304989,102304317,102267872,102267490,102261666	102345474,102344915,102315830,102307605,102305111,102304481,102268079,102267674,102263193	Gene ID= ENSG00000138821.12 TPM= 980.37 Transcript Type= protein_coding
chr4	102261666	102345139	102261666	102345139	-	ENST00000394833.6@SLC39A8	ENST00000394833.6	protein_coding	102344444,102315668,102307436,102304989,102304317,102267872,102267490,102261666	102345139,102315830,102307605,102305111,102304481,102268079,102267674,102263193	Gene ID= ENSG00000138821.12 TPM= 71.98 Transcript Type= protein_coding
chr4	102418602	102431236	102418602	102431236	-	transcript3334.chr4.nnic@AC098487.1	transcript3334.chr4.nnic	lincRNA	102431062,102430397,102418602	102431236,102430498,102418988	Gene ID= ENSG00000248161.5 TPM= 2.34 Transcript Type= NA
chr4	102418602	102431282	102418602	102431282	-	ENST00000505709.1@AC098487.1	ENST00000505709.1	lincRNA	102431062,102418602	102431282,102418988	Gene ID= ENSG00000248161.5 TPM= 1.17 Transcript Type= lincRNA
chr4	102501898	102617117	102501898	102617117	+	ENST00000505458.5@NFKB1	ENST00000505458.5	protein_coding	102501898,102525512,102529836,102533848,102537858,102566987,102576876,102578881,102580535,102582866,102584682,102593425,102594892,102596138,102597520,102600895,102606496,102607150,102607649,102610575,102612044,102612434,102613425,102616434	102502167,102525557,102529914,102533885,102537956,102567135,102577039,102579039,102580639,102582957,102584820,102593568,102594981,102596332,102597661,102601009,102606697,102607319,102607751,102610699,102612110,102612606,102613581,102617117	Gene ID= ENSG00000109320.11 TPM= 3.5 Transcript Type= protein_coding
chr4	102500843	102539257	102500843	102539257	+	transcript3360.chr4.nic@NFKB1	transcript3360.chr4.nic	protein_coding	102500843,102525512,102529836,102533845,102537858	102501788,102525557,102529914,102533885,102539257	Gene ID= ENSG00000109320.11 TPM= 5.55 Transcript Type= NA
chr4	102501329	102617302	102501329	102617302	+	ENST00000226574.8@NFKB1	ENST00000226574.8	protein_coding	102501329,102525512,102529836,102533845,102537858,102566987,102576876,102578881,102580535,102582866,102584682,102593425,102594892,102596138,102597520,102600895,102606496,102607150,102607649,102610575,102612044,102612434,102613425,102616434	102501788,102525557,102529914,102533885,102537956,102567135,102577039,102579039,102580639,102582957,102584820,102593568,102594981,102596332,102597661,102601009,102606697,102607319,102607751,102610699,102612110,102612606,102613581,102617302	Gene ID= ENSG00000109320.11 TPM= 67.72 Transcript Type= protein_coding
chr4	102753691	102760994	102753691	102760994	-	ENST00000507358.1@MANBA	ENST00000507358.1	protein_coding	102760718,102753691	102760994,102753995	Gene ID= ENSG00000109323.8 TPM= 2.34 Transcript Type= retained_intron
chr4	102789626	102791952	102789626	102791952	+	transcript3378.chr4.nnic@NA	transcript3378.chr4.nnic	NA	102789626	102791952	Gene ID= novel_gene_chr4_3379 TPM= 2.34 Transcript Type= NA
chr4	102795976	102827948	102795976	102827948	-	ENST00000394801.8@UBE2D3	ENST00000394801.8	protein_coding	102827592,102826485,102809792,102809672,102802561,102801454,102799407,102795976	102827948,102826636,102809855,102809703,102802638,102801559,102799500,102797460	Gene ID= ENSG00000109332.19 TPM= 65.68 Transcript Type= protein_coding
chr4	102797399	102825780	102797399	102825780	-	ENST00000502404.5@UBE2D3	ENST00000502404.5	protein_coding	102825722,102825239,102809792,102809672,102802561,102801454,102799407,102797399	102825780,102825317,102809855,102809703,102802638,102801559,102799500,102797460	Gene ID= ENSG00000109332.19 TPM= 1.17 Transcript Type= protein_coding
chr4	102868978	102889242	102868978	102889242	+	ENST00000273986.8@CISD2	ENST00000273986.8	protein_coding	102868978,102885216,102887341	102869187,102885430,102889242	Gene ID= ENSG00000145354.9 TPM= 4.67 Transcript Type= protein_coding
chr4	103025490	103076773	103025490	103076773	-	ENST00000394785.7@SLC9B2	ENST00000394785.7	protein_coding	103076184,103067461,103066327,103057801,103050240,103048893,103047051,103044890,103043296,103031700,103028747,103025490	103076773,103067592,103066507,103057971,103050382,103049020,103047226,103044996,103043445,103031808,103028883,103026591	Gene ID= ENSG00000164038.14 TPM= 2.34 Transcript Type= protein_coding
chr4	103078253	103099835	103078253	103099835	-	transcript3429.chr4.nic@BDH2	transcript3429.chr4.nic	protein_coding	103099783,103098644,103096183,103095203,103092600,103091177,103086480,103085349,103082871,103082081,103078253	103099835,103098802,103096274,103095281,103092696,103091285,103086540,103085462,103082929,103082173,103079755	Gene ID= ENSG00000164039.14 TPM= 2.34 Transcript Type= NA
chr4	103079435	103099883	103079435	103099883	-	ENST00000296424.8@BDH2	ENST00000296424.8	protein_coding	103099783,103096183,103095203,103092600,103091177,103086480,103085349,103082871,103082081,103079435	103099883,103096274,103095281,103092696,103091285,103086540,103085462,103082929,103082173,103079755	Gene ID= ENSG00000164039.14 TPM= 28.02 Transcript Type= protein_coding
chr4	103079477	103099828	103079477	103099828	-	ENST00000492366.5@BDH2	ENST00000492366.5	protein_coding	103099783,103096183,103095203,103092600,103091177,103085349,103082871,103082081,103079477	103099828,103096274,103095281,103092696,103091285,103086540,103082929,103082173,103079755	Gene ID= ENSG00000164039.14 TPM= 8.17 Transcript Type= retained_intron
chr4	105369565	105474095	105369565	105474095	-	transcript3455.chr4.nic@PPA2	transcript3455.chr4.nic	protein_coding	105473894,105456681,105453598,105446383,105437950,105424196,105399037,105396249,105386567,105370837,105369565	105474095,105456745,105453642,105446502,105438036,105424322,105399164,105396334,105386636,105370873,105369753	Gene ID= ENSG00000138777.19 TPM= 2.34 Transcript Type= NA
chr4	105419956	105474095	105419956	105474095	-	transcript3462.chr4.nic@PPA2	transcript3462.chr4.nic	protein_coding	105473894,105456681,105453598,105449350,105446383,105437950,105419956	105474095,105456745,105453642,105449403,105446502,105438036,105424322	Gene ID= ENSG00000138777.19 TPM= 2.34 Transcript Type= NA
chr4	105419469	105474062	105419469	105474062	-	transcript3463.chr4.nnic@PPA2	transcript3463.chr4.nnic	protein_coding	105473894,105449350,105446383,105437950,105424196,105419469	105474062,105449403,105446502,105438036,105424322,105422433	Gene ID= ENSG00000138777.19 TPM= 2.34 Transcript Type= NA
chr4	105369077	105474081	105369077	105474081	-	ENST00000341695.9@PPA2	ENST00000341695.9	protein_coding	105473894,105456681,105453598,105449350,105446383,105437950,105424196,105399037,105396249,105386567,105370837,105369077	105474081,105456745,105453642,105449403,105446502,105438036,105424322,105399164,105396334,105386636,105370873,105369753	Gene ID= ENSG00000138777.19 TPM= 3.5 Transcript Type= protein_coding
chr4	105369561	105474014	105369561	105474014	-	ENST00000509031.5@PPA2	ENST00000509031.5	protein_coding	105473894,105456681,105456248,105453598,105449350,105446383,105437950,105424196,105399037,105396249,105386567,105370837,105369561	105474014,105456745,105456291,105453642,105449403,105446502,105438036,105424322,105399164,105396334,105386636,105370873,105369753	Gene ID= ENSG00000138777.19 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr4	105446202	105474059	105446202	105474059	-	ENST00000499847.6@PPA2	ENST00000499847.6	protein_coding	105473894,105456681,105453598,105449350,105446202	105474059,105456745,105453642,105449403,105446502	Gene ID= ENSG00000138777.19 TPM= 2.34 Transcript Type= retained_intron
chr4	105471363	105474077	105471363	105474077	-	transcript3470.chr4.nnic@NA	transcript3470.chr4.nnic	NA	105471363	105474077	Gene ID= novel_gene_chr4_3471 TPM= 4.67 Transcript Type= NA
chr4	105682627	105709108	105682627	105709108	-	ENST00000451321.6@INTS12	ENST00000451321.6	protein_coding	105708638,105699850,105695516,105693299,105691976,105686692,105682627	105709108,105700014,105695668,105693486,105692135,105686838,105683317	Gene ID= ENSG00000138785.14 TPM= 12.26 Transcript Type= protein_coding
chr4	105682627	105708681	105682627	105708681	-	ENST00000340139.9@INTS12	ENST00000340139.9	protein_coding	105708638,105703648,105699850,105695516,105693299,105691976,105686692,105682627	105708681,105703809,105700014,105695668,105693486,105692135,105686838,105683317	Gene ID= ENSG00000138785.14 TPM= 12.26 Transcript Type= protein_coding
chr4	105708784	105847725	105708784	105847725	+	ENST00000394730.7@GSTCD	ENST00000394730.7	protein_coding	105708784,105717593,105719060,105726579,105729406,105822954,105823231,105825672,105834461,105837859,105842065,105845441	105709016,105717778,105719527,105726830,105729499,105823069,105823275,105825800,105834594,105837889,105842134,105847725	Gene ID= ENSG00000138780.14 TPM= 2.34 Transcript Type= protein_coding
chr4	105708818	105847728	105708818	105847728	+	ENST00000515279.5@GSTCD	ENST00000515279.5	protein_coding	105708818,105717593,105719060,105726579,105729406,105822954,105823231,105825672,105834461,105837859,105842065,105845441	105709016,105718039,105719527,105726830,105729499,105823069,105823275,105825800,105834594,105837889,105842134,105847728	Gene ID= ENSG00000138780.14 TPM= 7.01 Transcript Type= protein_coding
chr4	105895441	105971674	105895441	105971674	+	transcript3502.chr4.nic@NPNT	transcript3502.chr4.nic	protein_coding	105895441,105897901,105912188,105927336,105937009,105938301,105940075,105940514,105942307,105959028,105967188,105968895	105895723,105898001,105912238,105927428,105937128,105938420,105940209,105940636,105942702,105959126,105967444,105971674	Gene ID= ENSG00000168743.12 TPM= 10.89 Transcript Type= NA
chr4	105895437	105971674	105895437	105971674	+	ENST00000379987.6@NPNT	ENST00000379987.6	protein_coding	105895437,105897901,105927336,105937009,105938301,105940075,105940514,105942307,105958471,105959028,105967188,105968895	105895723,105898001,105927428,105937128,105938420,105940209,105940636,105942702,105958557,105959126,105967444,105971674	Gene ID= ENSG00000168743.12 TPM= 200.04 Transcript Type= protein_coding
chr4	105900836	105905990	105900836	105905990	-	transcript3518.chr4.nnic@NA	transcript3518.chr4.nnic	NA	105900836	105905990	Gene ID= novel_gene_chr4_3519 TPM= 22.18 Transcript Type= NA
chr4	106046091	106316266	106046091	106316266	-	transcript3524.chr4.nnic@TBCK	transcript3524.chr4.nnic	protein_coding	106315931,106308768,106295094,106262098,106260437,106251866,106250418,106248921,106248245,106247139,106244626,106242470,106236759,106236390,106235269,106233588,106232938,106231729,106230363,106212750,106194718,106193609,106171095,106116203,106095482,106046091	106316266,106308989,106295166,106262212,106260510,106252007,106250478,106248982,106248306,106247287,106244740,106242569,106236808,106236519,106235367,106233650,106233064,106231779,106230446,106212835,106194754,106193770,106171270,106116378,106095641,106046680	Gene ID= ENSG00000145348.16 TPM= 2.34 Transcript Type= NA
chr4	106046570	106316266	106046570	106316266	-	ENST00000394708.6@TBCK	ENST00000394708.6	protein_coding	106315931,106308768,106295094,106262098,106260437,106251866,106250418,106248921,106248245,106247139,106244626,106242470,106236759,106236390,106235269,106233588,106232938,106231729,106230363,106212750,106194718,106193609,106171095,106116203,106095482,106046570	106316266,106308989,106295166,106262212,106260510,106252007,106250478,106248982,106248306,106247287,106244764,106242569,106236808,106236519,106235367,106233650,106233064,106231779,106230446,106212835,106194754,106193770,106171270,106116378,106095641,106046680	Gene ID= ENSG00000145348.16 TPM= 1.17 Transcript Type= protein_coding
chr4	106046080	106316230	106046080	106316230	-	ENST00000361687.8@TBCK	ENST00000361687.8	protein_coding	106315931,106308768,106295094,106251866,106250418,106248921,106248245,106247139,106244626,106242470,106236759,106236390,106235269,106233588,106232938,106231729,106230363,106212750,106194718,106193609,106171095,106116203,106095482,106046080	106316230,106308989,106295166,106252007,106250478,106248982,106248306,106247287,106244764,106242569,106236808,106236519,106235367,106233650,106233064,106231779,106230446,106212835,106194754,106193770,106171270,106116378,106095641,106046680	Gene ID= ENSG00000145348.16 TPM= 1.17 Transcript Type= protein_coding
chr4	106316507	106349226	106316507	106349226	+	ENST00000394701.4@AIMP1	ENST00000394701.4	protein_coding	106316507,106324985,106327451,106328076,106331672,106336869,106347526	106316594,106325118,106327564,106328243,106331883,106337037,106349226	Gene ID= ENSG00000164022.16 TPM= 30.36 Transcript Type= protein_coding
chr4	106316550	106347765	106316550	106347765	+	transcript3540.chr4.nnic@AIMP1	transcript3540.chr4.nnic	protein_coding	106316550,106324985,106327451,106328076,106331672,106336869,106347526	106321451,106325118,106327564,106328243,106331883,106337037,106347765	Gene ID= ENSG00000164022.16 TPM= 4.67 Transcript Type= NA
chr4	106921802	107036297	106921802	107036297	-	ENST00000285311.7@DKK2	ENST00000285311.7	protein_coding	107035370,106925799,106924545,106921802	107036297,106925949,106924700,106924204	Gene ID= ENSG00000155011.8 TPM= 29.19 Transcript Type= protein_coding
chr4	107613666	107720452	107613666	107720452	-	ENST00000265174.4@PAPSS1	ENST00000265174.4	protein_coding	107720120,107701171,107693771,107687039,107682015,107659959,107656896,107654695,107653491,107644802,107631631,107613666	107720452,107701285,107694006,107687177,107682133,107660072,107657007,107654900,107653626,107645070,107631860,107614387	Gene ID= ENSG00000138801.8 TPM= 135.44 Transcript Type= protein_coding
chr4	107613666	107720095	107613666	107720095	-	transcript3547.chr4.nic@PAPSS1	transcript3547.chr4.nic	protein_coding	107719843,107701171,107693771,107687039,107682015,107659959,107656896,107654695,107653491,107644802,107631631,107613666	107720095,107701285,107694006,107687177,107682133,107660072,107657007,107654900,107653626,107645070,107631860,107614387	Gene ID= ENSG00000138801.8 TPM= 22.18 Transcript Type= NA
chr4	107824847	107915047	107824847	107915047	+	transcript3562.chr4.nic@SGMS2	transcript3562.chr4.nic	protein_coding	107824847,107858472,107895310,107899575,107903233,107908565,107910350	107825253,107858553,107896008,107899692,107903386,107908731,107915047	Gene ID= ENSG00000164023.14 TPM= 20.72 Transcript Type= NA
chr4	107931369	107953457	107931369	107953457	+	ENST00000332884.10@CYP2U1	ENST00000332884.10	protein_coding	107931369,107944970,107947376,107949350,107950245	107932133,107945605,107947537,107949517,107953457	Gene ID= ENSG00000155016.17 TPM= 12.84 Transcript Type= protein_coding
chr4	107931562	107953457	107931562	107953457	+	transcript3569.chr4.nnic@CYP2U1	transcript3569.chr4.nnic	protein_coding	107931562,107947376,107949350,107950245	107932133,107947537,107949517,107953457	Gene ID= ENSG00000155016.17 TPM= 3.5 Transcript Type= NA
chr4	107989784	108035175	107989784	108035175	+	ENST00000309522.7@HADH	ENST00000309522.7	protein_coding	107989784,108009759,108014431,108019540,108023474,108027688,108033176,108034239	107990064,108009887,108014588,108019666,108023563,108027760,108033292,108035175	Gene ID= ENSG00000138796.16 TPM= 77.06 Transcript Type= protein_coding
chr4	108047545	108168933	108047545	108168933	-	transcript3578.chr4.nic@LEF1	transcript3578.chr4.nic	protein_coding	108167555,108165097,108163568,108089125,108083356,108081586,108079492,108078220,108070663,108064336,108047545	108168933,108165163,108163701,108089257,108083446,108081669,108079614,108078382,108070770,108064384,108048751	Gene ID= ENSG00000138795.9 TPM= 4.67 Transcript Type= NA
chr4	108620566	108625255	108620566	108625255	+	ENST00000394667.7@RPL34	ENST00000394667.7	protein_coding	108620566,108621951,108622105,108622515,108625128	108620600,108622024,108622204,108622618,108625255	Gene ID= ENSG00000109475.16 TPM= 549.35 Transcript Type= protein_coding
chr4	108620590	108625255	108620590	108625255	+	ENST00000394665.5@RPL34	ENST00000394665.5	protein_coding	108620590,108621951,108622105,108622515,108625128	108620712,108622024,108622204,108622618,108625255	Gene ID= ENSG00000109475.16 TPM= 82.32 Transcript Type= protein_coding
chr4	108650584	108667820	108650584	108667820	+	ENST00000361564.8@OSTC	ENST00000361564.8	protein_coding	108650584,108655564,108657450,108667247	108650794,108655657,108657647,108667820	Gene ID= ENSG00000198856.12 TPM= 105.08 Transcript Type= protein_coding
chr4	109429963	109433817	109429963	109433817	-	ENST00000499359.2@SEC24B-AS1	ENST00000499359.2	antisense_RNA	109433734,109431692,109429963	109433817,109431746,109430780	Gene ID= ENSG00000247950.6 TPM= 1.17 Transcript Type= antisense_RNA
chr4	109433815	109540896	109433815	109540896	+	ENST00000265175.5@SEC24B	ENST00000265175.5	protein_coding	109433815,109462901,109473004,109481677,109491327,109494615,109506328,109510009,109511957,109513747,109516528,109520366,109521117,109521420,109524818,109525346,109526226,109527322,109530289,109531385,109532639,109533593,109538493,109539561	109434002,109463644,109473186,109481781,109491407,109494856,109506512,109510111,109512083,109513856,109516640,109520484,109521172,109521626,109524941,109525504,109526399,109527432,109530464,109531522,109532743,109533685,109538596,109540896	Gene ID= ENSG00000138802.11 TPM= 4.67 Transcript Type= protein_coding
chr4	109560205	109688726	109560205	109688726	+	ENST00000394650.6@MCUB	ENST00000394650.6	protein_coding	109560205,109659011,109660195,109664290,109682582,109684443,109685251,109687515	109560436,109659086,109660365,109664394,109682742,109684646,109685367,109688726	Gene ID= ENSG00000005059.15 TPM= 23.35 Transcript Type= protein_coding
chr4	109560204	109687716	109560204	109687716	+	transcript3605.chr4.nic@MCUB	transcript3605.chr4.nic	protein_coding	109560204,109659011,109660195,109664290,109682582,109684443,109687515	109560436,109659086,109660365,109664394,109682742,109685367,109687716	Gene ID= ENSG00000005059.15 TPM= 3.5 Transcript Type= NA
chr4	109560208	109687716	109560208	109687716	+	transcript3608.chr4.nnic@MCUB	transcript3608.chr4.nnic	protein_coding	109560208,109660195,109664290,109682582,109684443,109685251,109687515	109560436,109660365,109664394,109682742,109684646,109685367,109687716	Gene ID= ENSG00000005059.15 TPM= 2.34 Transcript Type= NA
chr4	109688742	109703473	109688742	109703473	-	ENST00000265164.6@CASP6	ENST00000265164.6	protein_coding	109703356,109698300,109697622,109696410,109694525,109690850,109688742	109703473,109698342,109697768,109696486,109694700,109691009,109689568	Gene ID= ENSG00000138794.9 TPM= 12.84 Transcript Type= protein_coding
chr4	109713917	109729974	109713917	109729974	-	ENST00000502283.1@PLA2G12A	ENST00000502283.1	protein_coding	109729602,109718689,109717548,109713917	109729974,109718759,109717713,109714495	Gene ID= ENSG00000123739.10 TPM= 4.67 Transcript Type= protein_coding
chr4	109726933	109730052	109726933	109730052	-	transcript3624.chr4.nnic@NA	transcript3624.chr4.nnic	NA	109726933	109730052	Gene ID= novel_gene_chr4_3625 TPM= 2.34 Transcript Type= NA
chr4	109730982	109802182	109730982	109802182	-	transcript3626.chr4.nnic@CFI	transcript3626.chr4.nnic	protein_coding	109801915,109766554,109764537,109761517,109760523,109760270,109757763,109752468,109749499,109749218,109746222,109742491,109734659,109730982	109802182,109766824,109764690,109761692,109760636,109760380,109757783,109752503,109749602,109749321,109746502,109742595,109734800,109731342	Gene ID= ENSG00000205403.12 TPM= 6.62 Transcript Type= NA
chr4	109730982	109802083	109730982	109802083	-	transcript3630.chr4.nnic@CFI	transcript3630.chr4.nnic	protein_coding	109801915,109766554,109764537,109761517,109760523,109760270,109757763,109752468,109749499,109749218,109746222,109742491,109730982	109802083,109766824,109764690,109761692,109760636,109760380,109757783,109752503,109749602,109749321,109746502,109742595,109731342	Gene ID= ENSG00000205403.12 TPM= 5.45 Transcript Type= NA
chr4	109740694	109802179	109740694	109802179	-	ENST00000394634.6@CFI	ENST00000394634.6	protein_coding	109801915,109766554,109764537,109761517,109760523,109760270,109757763,109752468,109749499,109749218,109746222,109742491,109740694	109802179,109766824,109764690,109761692,109760636,109760380,109757783,109752503,109749602,109749321,109746502,109742595,109741110	Gene ID= ENSG00000205403.12 TPM= 51.57 Transcript Type= protein_coding
chr4	109740696	109802051	109740696	109802051	-	ENST00000394635.7@CFI	ENST00000394635.7	protein_coding	109801915,109766554,109764537,109761517,109760523,109760270,109757936,109757763,109752468,109749499,109749218,109746222,109742491,109740696	109802051,109766824,109764690,109761692,109760636,109760380,109757959,109757783,109752503,109749602,109749321,109746502,109742595,109741110	Gene ID= ENSG00000205403.12 TPM= 5.25 Transcript Type= protein_coding
chr4	109815553	109824737	109815553	109824737	+	ENST00000226796.6@GAR1	ENST00000226796.6	protein_coding	109815553,109816153,109817936,109819001,109822347,109823965,109824418	109815804,109816378,109818090,109819060,109822488,109824033,109824737	Gene ID= ENSG00000109534.16 TPM= 9.34 Transcript Type= protein_coding
chr4	110045846	110198653	110045846	110198653	-	ENST00000394607.7@ELOVL6	ENST00000394607.7	protein_coding	110198522,110198247,110105497,110059603,110045846	110198653,110198367,110105628,110059754,110051762	Gene ID= ENSG00000170522.9 TPM= 1.17 Transcript Type= protein_coding
chr4	110049387	110198676	110049387	110198676	-	ENST00000302274.7@ELOVL6	ENST00000302274.7	protein_coding	110198247,110105497,110059603,110049387	110198676,110105628,110059754,110051762	Gene ID= ENSG00000170522.9 TPM= 4.67 Transcript Type= protein_coding
chr4	110476073	110565285	110476073	110565285	+	ENST00000265162.9@ENPEP	ENST00000265162.9	protein_coding	110476073,110488541,110491033,110506637,110509653,110510245,110513415,110515377,110520008,110520215,110531198,110542751,110543015,110548176,110549346,110549528,110549716,110553315,110559647,110561406	110477058,110488682,110491164,110506757,110509807,110510358,110513549,110515442,110520073,110520366,110531277,110542887,110543070,110548326,110549419,110549632,110549886,110553455,110559725,110565285	Gene ID= ENSG00000138792.9 TPM= 1.17 Transcript Type= protein_coding
chr4	112231884	112270047	112231884	112270047	+	transcript3655.chr4.nnic@AP1AR	transcript3655.chr4.nnic	protein_coding	112231884,112246968,112253208,112254747,112257772,112260766,112262988,112265009,112265734,112266588,112268144	112232174,112247006,112253256,112254773,112257797,112260862,112263086,112265067,112265807,112266716,112270047	Gene ID= ENSG00000138660.11 TPM= 2.34 Transcript Type= NA
chr4	112231737	112270047	112231737	112270047	+	ENST00000274000.9@AP1AR	ENST00000274000.9	protein_coding	112231737,112253208,112254747,112257772,112260766,112262988,112265009,112265734,112266588,112268144	112232174,112253256,112254773,112257797,112260862,112263086,112265067,112265807,112266716,112270047	Gene ID= ENSG00000138660.11 TPM= 67.72 Transcript Type= protein_coding
chr4	112297343	112442606	112297343	112442606	+	ENST00000458497.5@ALPK1	ENST00000458497.5	protein_coding	112297343,112315801,112377678,112382398,112411827,112423944,112425665,112426467,112427570,112429149,112430448,112435148,112438484,112439686,112440917,112441203	112297469,112315852,112377898,112382552,112412025,112424003,112425751,112426543,112427665,112429253,112432581,112435301,112438646,112439872,112441105,112442606	Gene ID= ENSG00000073331.17 TPM= 1.17 Transcript Type= protein_coding
chr4	112297343	112442618	112297343	112442618	+	transcript3672.chr4.nic@ALPK1	transcript3672.chr4.nic	protein_coding	112297343,112315801,112377678,112382398,112411827,112423944,112425665,112426467,112427570,112429149,112430448,112435148,112438484,112439686,112440917	112297469,112315852,112377898,112382552,112412025,112424003,112425751,112426543,112427665,112429253,112432581,112435301,112438646,112439872,112442618	Gene ID= ENSG00000073331.17 TPM= 2.34 Transcript Type= NA
chr4	112637173	112657586	112637173	112657586	+	transcript3686.chr4.nic@LARP7	transcript3686.chr4.nic	protein_coding	112637173,112644668,112646351,112646588,112646791,112647034,112647199,112647651,112649535,112650461,112653077,112654068,112657247	112637239,112644871,112646451,112646671,112646955,112647127,112647549,112647834,112649686,112650582,112653236,112654159,112657586	Gene ID= ENSG00000174720.15 TPM= 2.34 Transcript Type= NA
chr4	112636964	112657586	112636964	112657586	+	ENST00000344442.9@LARP7	ENST00000344442.9	protein_coding	112636964,112644668,112646351,112646588,112646791,112647034,112647199,112647690,112649535,112650461,112653077,112654068,112657247	112637239,112644871,112646451,112646671,112646955,112647127,112647549,112647834,112649686,112650582,112653236,112654159,112657586	Gene ID= ENSG00000174720.15 TPM= 7.01 Transcript Type= protein_coding
chr4	112637459	112657586	112637459	112657586	+	transcript3688.chr4.nic@LARP7	transcript3688.chr4.nic	protein_coding	112637459,112644668,112646351,112646588,112646791,112647034,112647199,112647651,112649535,112650461,112653077,112654068,112657247	112637603,112644871,112646451,112646671,112646955,112647127,112647549,112647834,112649686,112650582,112653236,112654159,112657586	Gene ID= ENSG00000174720.15 TPM= 3.5 Transcript Type= NA
chr4	112637456	112657592	112637456	112657592	+	ENST00000324052.10@LARP7	ENST00000324052.10	protein_coding	112637456,112644668,112646351,112646588,112646791,112647034,112647199,112647690,112649535,112650461,112653077,112654068,112657247	112637603,112644871,112646451,112646671,112646955,112647127,112647549,112647834,112649686,112650582,112653236,112654159,112657592	Gene ID= ENSG00000174720.15 TPM= 18.68 Transcript Type= protein_coding
chr4	113214046	113214393	113214046	113214393	-	ENST00000485827.1@AC004057.1	ENST00000485827.1	transcribed_processed_pseudogene	113214046	113214393	Gene ID= ENSG00000196656.7 TPM= 539.43 Transcript Type= transcribed_processed_pseudogene
chr4	113451032	113761445	113451032	113761445	-	ENST00000394524.7@CAMK2D	ENST00000394524.7	protein_coding	113761004,113759320,113661713,113609152,113552031,113548657,113537341,113531216,113517563,113515069,113513830,113513328,113509638,113500463,113465529,113460147,113457335,113451032	113761445,113759414,113661772,113609206,113552096,113548729,113537443,113531299,113517657,113515191,113513913,113513370,113509675,113500511,113465604,113460241,113457563,113454515	Gene ID= ENSG00000145349.16 TPM= 18.68 Transcript Type= protein_coding
chr4	113901184	113979929	113901184	113979929	-	transcript3730.chr4.nnic@ARSJ	transcript3730.chr4.nnic	protein_coding	113978437,113906696,113902309,113901900,113901184	113979929,113906745,113903675,113902212,113901858	Gene ID= ENSG00000180801.13 TPM= 2.34 Transcript Type= NA
chr4	113901184	113979641	113901184	113979641	-	transcript3734.chr4.nnic@ARSJ	transcript3734.chr4.nnic	protein_coding	113978437,113906696,113901900,113901184	113979641,113906745,113903675,113901858	Gene ID= ENSG00000180801.13 TPM= 2.92 Transcript Type= NA
chr4	113901184	113979648	113901184	113979648	-	transcript3735.chr4.nnic@ARSJ	transcript3735.chr4.nnic	protein_coding	113978437,113901900,113901184	113979648,113903675,113901858	Gene ID= ENSG00000180801.13 TPM= 4.09 Transcript Type= NA
chr4	117083554	117085576	117083554	117085576	-	ENST00000310754.5@TRAM1L1	ENST00000310754.5	protein_coding	117083554	117085576	Gene ID= ENSG00000174599.5 TPM= 2.34 Transcript Type= protein_coding
chr4	118278758	118279821	118278758	118279821	+	ENST00000602819.5@SNHG8	ENST00000602819.5	lincRNA	118278758,118278944,118279389,118279624	118278792,118279137,118279431,118279821	Gene ID= ENSG00000269893.6 TPM= 14.59 Transcript Type= lincRNA
chr4	118278709	118279823	118278709	118279823	+	ENST00000602414.5@SNHG8	ENST00000602414.5	lincRNA	118278709,118279389,118279624	118279137,118279431,118279823	Gene ID= ENSG00000269893.6 TPM= 28.61 Transcript Type= lincRNA
chr4	118278709	118279823	118278709	118279823	+	ENST00000602520.5@SNHG8	ENST00000602520.5	lincRNA	118278709,118279389,118279624	118278792,118279431,118279823	Gene ID= ENSG00000269893.6 TPM= 7.01 Transcript Type= lincRNA
chr4	118278757	118279820	118278757	118279820	+	transcript3747.chr4.nic@SNHG8	transcript3747.chr4.nic	lincRNA	118278757,118279389	118279137,118279820	Gene ID= ENSG00000269893.6 TPM= 2.34 Transcript Type= NA
chr4	118685368	118715433	118685368	118715433	+	ENST00000388822.9@METTL14	ENST00000388822.9	protein_coding	118685368,118687923,118689370,118691532,118691981,118694436,118697182,118700550,118703935,118705611,118709998	118685600,118688011,118689457,118691612,118692068,118694526,118697323,118700642,118704051,118705821,118715433	Gene ID= ENSG00000145388.14 TPM= 1.17 Transcript Type= protein_coding
chr4	118685370	118698477	118685370	118698477	+	transcript3764.chr4.nic@METTL14	transcript3764.chr4.nic	protein_coding	118685370,118687923,118689370,118691532,118691981,118694436,118697182	118685600,118688011,118689457,118691612,118692068,118694526,118698477	Gene ID= ENSG00000145388.14 TPM= 3.5 Transcript Type= NA
chr4	118722823	118836138	118722823	118836138	-	ENST00000280551.10@SEC24D	ENST00000280551.10	protein_coding	118835941,118833579,118824620,118817264,118815451,118815028,118805843,118797683,118768173,118764802,118757721,118752697,118751996,118744944,118743988,118740941,118740663,118739149,118738261,118732733,118731316,118728561,118722823	118836138,118833737,118824749,118817412,118815726,118815155,118805954,118797810,118768311,118764917,118757845,118752888,118752089,118745060,118744158,118741037,118740808,118739287,118738379,118732912,118731507,118728650,118723655	Gene ID= ENSG00000150961.14 TPM= 58.38 Transcript Type= protein_coding
chr4	118888855	119038513	118888855	119038513	+	ENST00000429713.6@SYNPO2	ENST00000429713.6	protein_coding	118888855,119023430,119026627,119029845	118889141,119023581,119027438,119038513	Gene ID= ENSG00000172403.10 TPM= 7.01 Transcript Type= protein_coding
chr4	119212584	119294746	119212584	119294746	+	transcript3783.chr4.nic@USP53	transcript3783.chr4.nic	protein_coding	119212584,119217550,119235290,119239218,119245337,119248748,119256246,119256441,119259820,119260507,119261715,119267320,119268268,119269691,119271296,119273632,119291165,119292338	119212873,119217673,119235411,119239903,119245429,119248882,119256359,119256523,119259925,119260653,119261864,119267482,119268420,119269837,119272034,119273708,119291261,119294746	Gene ID= ENSG00000145390.11 TPM= 3.5 Transcript Type= NA
chr4	119212584	119294638	119212584	119294638	+	transcript3788.chr4.nnic@USP53	transcript3788.chr4.nnic	protein_coding	119212584,119217550,119239218,119245337,119248748,119256246,119256441,119259820,119260507,119261715,119267320,119268268,119269691,119271296,119273632,119291165,119292338	119212873,119217673,119239903,119245429,119248882,119256359,119256523,119259925,119260653,119261864,119267482,119268420,119269837,119272034,119273708,119291261,119294638	Gene ID= ENSG00000145390.11 TPM= 7.01 Transcript Type= NA
chr4	119212584	119295517	119212584	119295517	+	transcript3792.chr4.nnic@USP53	transcript3792.chr4.nnic	protein_coding	119212584,119217550,119245337,119248748,119256246,119256441,119259820,119260507,119261715,119267320,119268268,119269691,119271296,119273632,119291165,119292338	119212873,119217673,119245429,119248882,119256359,119256523,119259925,119260653,119261864,119267482,119268420,119269837,119272034,119273708,119291261,119295517	Gene ID= ENSG00000145390.11 TPM= 3.5 Transcript Type= NA
chr4	119212631	119214138	119212631	119214138	+	transcript3798.chr4.nic@USP53	transcript3798.chr4.nic	protein_coding	119212631,119214070	119212873,119214138	Gene ID= ENSG00000145390.11 TPM= 4.67 Transcript Type= NA
chr4	119212636	119294746	119212636	119294746	+	ENST00000274030.10@USP53	ENST00000274030.10	protein_coding	119212636,119214070,119217550,119235290,119239218,119245337,119248748,119256246,119256441,119259820,119260507,119261715,119267320,119268268,119269691,119271296,119273632,119291165,119292338	119212873,119214222,119217673,119235411,119239903,119245429,119248882,119256359,119256523,119259925,119260653,119261864,119267482,119268420,119269837,119272034,119273708,119291261,119294746	Gene ID= ENSG00000145390.11 TPM= 2.34 Transcript Type= protein_coding
chr4	119405520	119406790	119405520	119406790	-	transcript3803.chr4.nnic@NA	transcript3803.chr4.nnic	NA	119405520	119406790	Gene ID= novel_gene_chr4_3804 TPM= 2.34 Transcript Type= NA
chr4	119449570	119454628	119449570	119454628	-	ENST00000635323.1@GTF2IP12	ENST00000635323.1	transcribed_unprocessed_pseudogene	119454246,119449570	119454628,119450125	Gene ID= ENSG00000283050.1 TPM= 1.17 Transcript Type= processed_transcript
chr4	119454814	119552025	119454814	119552025	+	transcript3826.chr4.nnic@AC093752.1	transcript3826.chr4.nnic	transcribed_unprocessed_pseudogene	119454814,119460183,119460731,119461717,119462896,119493333,119494433,119497811,119499561,119512351,119512813,119528740,119543753,119550379,119551888	119455133,119460242,119460827,119461851,119462979,119493437,119494523,119497903,119499836,119512464,119512970,119528789,119543845,119550443,119552025	Gene ID= ENSG00000245958.6 TPM= 2.34 Transcript Type= NA
chr4	119454734	119519646	119454734	119519646	+	transcript3832.chr4.nic@AC093752.1	transcript3832.chr4.nic	transcribed_unprocessed_pseudogene	119454734,119460183,119460731,119461717,119462896,119488645,119493333,119494433,119497811,119512351,119512813,119519489	119455133,119460242,119460827,119461851,119462979,119488717,119493437,119494523,119497903,119512464,119512970,119519646	Gene ID= ENSG00000245958.6 TPM= 3.5 Transcript Type= NA
chr4	119454835	119499967	119454835	119499967	+	transcript3837.chr4.nic@AC093752.1	transcript3837.chr4.nic	transcribed_unprocessed_pseudogene	119454835,119460183,119460731,119461717,119462896,119493333,119494433,119497811,119499561	119455133,119460242,119460827,119461851,119462979,119493437,119494523,119497903,119499967	Gene ID= ENSG00000245958.6 TPM= 2.34 Transcript Type= NA
chr4	119494397	119628084	119494397	119628084	-	ENST00000394439.5@PDE5A	ENST00000394439.5	protein_coding	119627995,119606709,119596523,119567073,119565321,119562833,119560296,119553638,119552550,119542459,119538960,119525549,119520935,119519045,119511047,119507604,119505855,119504536,119502581,119501170,119494397	119628084,119607297,119596612,119567144,119565410,119562970,119560363,119553746,119552637,119542634,119539019,119525695,119521060,119519139,119511134,119507704,119505932,119504599,119502655,119501253,119498738	Gene ID= ENSG00000138735.15 TPM= 3.5 Transcript Type= protein_coding
chr4	119494395	119628991	119494395	119628991	-	ENST00000354960.7@PDE5A	ENST00000354960.7	protein_coding	119628520,119606709,119596523,119567073,119565321,119562833,119560296,119553638,119552550,119542459,119538960,119525549,119520935,119519045,119511047,119507604,119505855,119504536,119502581,119501170,119494395	119628991,119607297,119596612,119567144,119565410,119562970,119560363,119553746,119552637,119542634,119539019,119525695,119521060,119519139,119511134,119507704,119505932,119504599,119502655,119501253,119498738	Gene ID= ENSG00000138735.15 TPM= 5.84 Transcript Type= protein_coding
chr4	119521373	119525263	119521373	119525263	-	transcript3840.chr4.nnic@NA	transcript3840.chr4.nnic	NA	119521373	119525263	Gene ID= novel_gene_chr4_3841 TPM= 3.5 Transcript Type= NA
chr4	120055608	120067074	120055608	120067074	-	ENST00000296509.10@MAD2L1	ENST00000296509.10	protein_coding	120066662,120065672,120061975,120060874,120055608	120067074,120065818,120062095,120060977,120060290	Gene ID= ENSG00000164109.13 TPM= 8.17 Transcript Type= protein_coding
chr4	120066962	120070212	120066962	120070212	+	transcript3843.chr4.nnic@NA	transcript3843.chr4.nnic	NA	120066962	120070212	Gene ID= novel_gene_chr4_3844 TPM= 2.34 Transcript Type= NA
chr4	120694823	120922858	120694823	120922858	-	ENST00000428209.6@PRDM5	ENST00000428209.6	protein_coding	120922516,120907474,120853418,120821171,120818353,120816453,120811370,120799661,120798267,120784998,120781143,120777188,120754553,120710309,120694823	120922858,120907557,120853540,120821345,120818527,120816574,120811449,120799745,120798424,120785091,120781303,120777281,120754638,120710413,120695275	Gene ID= ENSG00000138738.10 TPM= 1.17 Transcript Type= protein_coding
chr4	121035613	121072518	121035613	121072518	-	ENST00000379692.8@NDNF	ENST00000379692.8	protein_coding	121071993,121045650,121039930,121035613	121072518,121045838,121040054,121037657	Gene ID= ENSG00000173376.13 TPM= 109.75 Transcript Type= protein_coding
chr4	121667955	121697113	121667955	121697113	-	ENST00000296511.9@ANXA5	ENST00000296511.9	protein_coding	121696863,121696581,121686288,121684677,121683364,121681671,121678415,121677894,121672533,121671547,121669954,121669602,121667955	121697113,121696624,121686372,121684771,121683477,121681761,121678494,121677950,121672626,121671642,121670012,121669724,121668527	Gene ID= ENSG00000164111.14 TPM= 983.11 Transcript Type= protein_coding
chr4	121668027	121696966	121668027	121696966	-	ENST00000506395.5@ANXA5	ENST00000506395.5	protein_coding	121696863,121696581,121686288,121684677,121683364,121681671,121678352,121677894,121672533,121671547,121669954,121669602,121668027	121696966,121696624,121686372,121684771,121683477,121681761,121678494,121677950,121672626,121671642,121670012,121669724,121668527	Gene ID= ENSG00000164111.14 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr4	121801320	121816909	121801320	121816909	+	ENST00000379663.7@EXOSC9	ENST00000379663.7	protein_coding	121801320,121801827,121802674,121802915,121804622,121807540,121809967,121811583,121813234,121813866,121816144,121816369,121816772	121801490,121801921,121802793,121803017,121804759,121807622,121810099,121811671,121813380,121814047,121816194,121816447,121816909	Gene ID= ENSG00000123737.12 TPM= 1.17 Transcript Type= protein_coding
chr4	121801317	121816909	121801317	121816909	+	ENST00000243498.9@EXOSC9	ENST00000243498.9	protein_coding	121801317,121801827,121802674,121802915,121804622,121807540,121809967,121811583,121813234,121813866,121816369,121816772	121801490,121801921,121802793,121803017,121804759,121807622,121810099,121811671,121813380,121814047,121816447,121816909	Gene ID= ENSG00000123737.12 TPM= 10.51 Transcript Type= protein_coding
chr4	121801323	121817021	121801323	121817021	+	ENST00000513654.5@EXOSC9	ENST00000513654.5	protein_coding	121801323,121801827,121802674,121802915,121804622,121807540,121809967,121811583,121813234,121813866,121816772	121801490,121801921,121802793,121803017,121804759,121807622,121810073,121811671,121813380,121816447,121817021	Gene ID= ENSG00000123737.12 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr4	121816444	121823932	121816444	121823932	-	ENST00000274026.9@CCNA2	ENST00000274026.9	protein_coding	121823416,121822403,121820979,121820542,121819372,121818800,121818044,121816444	121823932,121822646,121821091,121820765,121819579,121818913,121818177,121817686	Gene ID= ENSG00000145386.9 TPM= 1.17 Transcript Type= protein_coding
chr4	121824440	121870497	121824440	121870497	-	ENST00000264499.8@BBS7	ENST00000264499.8	protein_coding	121870278,121867981,121863217,121861504,121858992,121855489,121854704,121852956,121848844,121847404,121845504,121843927,121839631,121835144,121833231,121828619,121828402,121828146,121824440	121870497,121868046,121863279,121861679,121859178,121855561,121854820,121853086,121848928,121847506,121845696,121844001,121839696,121835283,121833395,121828728,121828505,121828269,121825993	Gene ID= ENSG00000138686.9 TPM= 9.34 Transcript Type= protein_coding
chr4	122307985	122362750	122307985	122362750	+	transcript3908.chr4.nic@KIAA1109	transcript3908.chr4.nic	protein_coding	122307985,122309266,122313628,122315462,122316732,122318147,122324427,122325230,122325855,122328104,122331326,122333629,122334344,122336192,122336881,122339207,122343410,122344382,122346623,122347522,122348567,122349158,122349450,122349857,122352904,122353814,122355796,122356621,122359557,122362031	122308160,122309464,122313687,122315688,122316862,122318270,122324536,122325320,122325917,122328357,122331541,122333809,122334440,122336353,122337020,122339408,122343610,122344561,122346760,122347779,122348717,122349315,122349642,122350074,122353155,122354017,122355990,122356755,122359722,122362750	Gene ID= ENSG00000138688.15 TPM= 14.01 Transcript Type= NA
chr4	122321981	122324178	122321981	122324178	-	transcript3910.chr4.nnic@NA	transcript3910.chr4.nnic	NA	122321981	122324178	Gene ID= novel_gene_chr4_3911 TPM= 7.01 Transcript Type= NA
chr4	122732702	122744943	122732702	122744943	+	ENST00000314218.7@BBS12	ENST00000314218.7	protein_coding	122732702,122741883	122732884,122744943	Gene ID= ENSG00000181004.9 TPM= 5.84 Transcript Type= protein_coding
chr4	122826708	122898236	122826708	122898236	+	ENST00000264498.7@FGF2	ENST00000264498.7	protein_coding	122826708,122876321,122892211	122827352,122876424,122898236	Gene ID= ENSG00000138685.13 TPM= 8.17 Transcript Type= protein_coding
chr4	122826831	122895464	122826831	122895464	+	ENST00000608478.1@FGF2	ENST00000608478.1	protein_coding	122826831,122876321,122892211	122827352,122876424,122895464	Gene ID= ENSG00000138685.13 TPM= 2.34 Transcript Type= protein_coding
chr4	122892644	122922606	122892644	122922606	-	ENST00000304430.9@NUDT6	ENST00000304430.9	protein_coding	122922335,122917501,122912568,122897624,122892644	122922606,122917704,122912623,122897678,122893225	Gene ID= ENSG00000170917.13 TPM= 2.34 Transcript Type= protein_coding
chr4	122923063	123095043	122923063	123095043	+	transcript3923.chr4.nic@SPATA5	transcript3923.chr4.nic	protein_coding	122923063,122927634,122929040,122933439,122934097,122935714,122936100,122938126,122947233,122979232,123028186,123056387,123057209,123090579	122923305,122927758,122929197,122933497,122934738,122935843,122936156,122938249,122947488,122979386,123028395,123056440,123057288,123095043	Gene ID= ENSG00000145375.7 TPM= 2.34 Transcript Type= NA
chr4	123396781	123403760	123396781	123403760	+	transcript3925.chr4.nic@SPRY1	transcript3925.chr4.nic	protein_coding	123396781,123397611,123401537	123396932,123398513,123403760	Gene ID= ENSG00000164056.10 TPM= 137.19 Transcript Type= NA
chr4	123399510	123403755	123399510	123403755	+	ENST00000394339.2@SPRY1	ENST00000394339.2	protein_coding	123399510,123401537	123399794,123403755	Gene ID= ENSG00000164056.10 TPM= 5.25 Transcript Type= protein_coding
chr4	123396795	123403760	123396795	123403760	+	ENST00000610581.4@SPRY1	ENST00000610581.4	protein_coding	123396795,123397611,123401537	123396932,123397856,123403760	Gene ID= ENSG00000164056.10 TPM= 2.92 Transcript Type= protein_coding
chr4	123398386	123403760	123398386	123403760	+	ENST00000622283.1@SPRY1	ENST00000622283.1	protein_coding	123398386,123401537	123398513,123403760	Gene ID= ENSG00000164056.10 TPM= 12.26 Transcript Type= protein_coding
chr4	123398038	123403753	123398038	123403753	+	transcript3929.chr4.nnic@NA	transcript3929.chr4.nnic	NA	123398038	123403753	Gene ID= novel_gene_chr4_3930 TPM= 3.5 Transcript Type= NA
chr4	124664052	124712732	124664052	124712732	-	ENST00000504087.5@ANKRD50	ENST00000504087.5	protein_coding	124712458,124710000,124678676,124668984,124664052	124712732,124711274,124678905,124672534,124667514	Gene ID= ENSG00000151458.11 TPM= 8.17 Transcript Type= protein_coding
chr4	125316399	125492932	125316399	125492932	+	ENST00000394329.7@FAT4	ENST00000394329.7	protein_coding	125316399,125398784,125406880,125408444,125414884,125416448,125434245,125446299,125448461,125463563,125468512,125476171,125477155,125479741,125481521,125487345,125489901	125321586,125398915,125407141,125408794,125415806,125416622,125434425,125446543,125452810,125463667,125468819,125476256,125477334,125479865,125481738,125487606,125492932	Gene ID= ENSG00000196159.11 TPM= 4.67 Transcript Type= protein_coding
chr4	127880861	127899195	127880861	127899195	+	ENST00000270861.9@PLK4	ENST00000270861.9	protein_coding	127880861,127881831,127883262,127883439,127885708,127887396,127889866,127891092,127891579,127892365,127893285,127893513,127893734,127894953,127896801,127898439	127881164,127881926,127883357,127883553,127886728,127887496,127890236,127891196,127891681,127892514,127893418,127893604,127893881,127895093,127896907,127899195	Gene ID= ENSG00000142731.10 TPM= 1.17 Transcript Type= protein_coding
chr4	127917732	127965669	127917732	127965669	-	ENST00000641686.1@MFSD8	ENST00000641686.1	protein_coding	127965072,127957501,127949804,127943752,127942045,127939853,127938783,127932985,127930683,127921860,127921524,127917732	127965669,127957592,127949847,127943992,127942158,127939997,127938838,127933093,127930817,127921963,127921771,127920836	Gene ID= ENSG00000164073.10 TPM= 1.17 Transcript Type= protein_coding
chr4	127919215	127965995	127919215	127965995	-	ENST00000515130.6@MFSD8	ENST00000515130.6	protein_coding	127965897,127965072,127957501,127949804,127943752,127942045,127939853,127938783,127932985,127930683,127921524,127919215	127965995,127965482,127957590,127949847,127943992,127942158,127939997,127938838,127933093,127930817,127921771,127920836	Gene ID= ENSG00000164073.10 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr4	128061325	128108901	128061325	128108901	+	transcript3981.chr4.nnic@LARP1B	transcript3981.chr4.nnic	protein_coding	128061325,128074460,128074934,128077788,128082165,128091001,128091347,128098186,128107139,128107883	128062219,128074518,128074993,128077962,128082305,128091144,128091512,128098330,128107313,128108901	Gene ID= ENSG00000138709.17 TPM= 4.67 Transcript Type= NA
chr4	128061268	128211988	128061268	128211988	+	ENST00000326639.10@LARP1B	ENST00000326639.10	protein_coding	128061268,128074460,128074934,128077788,128082165,128091001,128091347,128098186,128107139,128114570,128121826,128162194,128176872,128178431,128179406,128199439,128200521,128206428,128207256,128209856	128061401,128074518,128074993,128077962,128082305,128091144,128091512,128098330,128107313,128114742,128122188,128162317,128176907,128178642,128179512,128199599,128200665,128206537,128207383,128211988	Gene ID= ENSG00000138709.17 TPM= 1.17 Transcript Type= protein_coding
chr4	128061335	128108901	128061335	128108901	+	ENST00000394288.7@LARP1B	ENST00000394288.7	protein_coding	128061335,128074460,128074934,128077788,128082165,128091001,128091347,128098186,128107139,128107883	128061401,128074518,128074993,128077962,128082305,128091144,128091512,128098330,128107313,128108901	Gene ID= ENSG00000138709.17 TPM= 2.34 Transcript Type= protein_coding
chr4	128428043	128487119	128428043	128487119	+	transcript3992.chr4.nic@AC108062.1	transcript3992.chr4.nic	lincRNA	128428043,128466608,128470050,128470352,128481673,128483329	128428298,128466772,128470216,128470549,128481750,128487119	Gene ID= ENSG00000251432.6 TPM= 2.34 Transcript Type= NA
chr4	128809810	128873306	128809810	128873306	+	transcript3994.chr4.nic@JADE1	transcript3994.chr4.nic	protein_coding	128809810,128816367,128831733,128842953,128846375,128848980,128852057,128855630,128857338,128861704,128867856,128871355	128809877,128816463,128831810,128843038,128846532,128849167,128852268,128855797,128857454,128862225,128867973,128873306	Gene ID= ENSG00000077684.15 TPM= 2.34 Transcript Type= NA
chr4	128810197	128873306	128810197	128873306	+	transcript3995.chr4.nnic@JADE1	transcript3995.chr4.nnic	protein_coding	128810197,128816367,128831733,128842953,128846375,128848980,128852057,128855630,128857338,128861704,128867856,128871355	128810291,128816463,128831810,128843038,128846532,128849167,128852268,128855797,128857454,128862225,128867973,128873306	Gene ID= ENSG00000077684.15 TPM= 3.5 Transcript Type= NA
chr4	128809623	128875224	128809623	128875224	+	ENST00000226319.10@JADE1	ENST00000226319.10	protein_coding	128809623,128831733,128842953,128846375,128848980,128852057,128855630,128857338,128861704,128867856,128871355	128809877,128831810,128843038,128846532,128849167,128852268,128855797,128857454,128862225,128867973,128875224	Gene ID= ENSG00000077684.15 TPM= 5.84 Transcript Type= protein_coding
chr4	128811515	128873306	128811515	128873306	+	transcript4001.chr4.nnic@JADE1	transcript4001.chr4.nnic	protein_coding	128811515,128831733,128842953,128846375,128848980,128852057,128855630,128857338,128861704,128867856,128871355	128811841,128831810,128843038,128846532,128849167,128852268,128855797,128857454,128862225,128867973,128873306	Gene ID= ENSG00000077684.15 TPM= 3.5 Transcript Type= NA
chr4	128809655	128873280	128809655	128873280	+	transcript4004.chr4.nnic@JADE1	transcript4004.chr4.nnic	protein_coding	128809655,128831733,128842953,128846375,128848980,128852057,128855630,128857338,128861704,128871355	128809877,128831810,128843038,128846532,128849167,128852268,128855797,128857454,128862225,128873280	Gene ID= ENSG00000077684.15 TPM= 3.5 Transcript Type= NA
chr4	128809655	128873306	128809655	128873306	+	transcript4006.chr4.nnic@JADE1	transcript4006.chr4.nnic	protein_coding	128809655,128831733,128842953,128846375,128848980,128852057,128855630,128861704,128867856,128871355	128809877,128831810,128843038,128846532,128849167,128852268,128855797,128862225,128867973,128873306	Gene ID= ENSG00000077684.15 TPM= 2.34 Transcript Type= NA
chr4	128809703	128864081	128809703	128864081	+	ENST00000511647.5@JADE1	ENST00000511647.5	protein_coding	128809703,128831733,128842953,128846375,128848980,128852057,128855630,128857338,128861704	128809877,128831810,128843038,128846532,128849167,128852268,128855797,128857454,128864081	Gene ID= ENSG00000077684.15 TPM= 7.01 Transcript Type= protein_coding
chr4	128883993	129093607	128883993	129093607	-	ENST00000281142.9@SCLT1	ENST00000281142.9	protein_coding	129093070,129082306,129043993,129043395,129039041,129003741,128999672,128997874,128992167,128970378,128965227,128959600,128957026,128952769,128948496,128946007,128942996,128936655,128891059,128888679,128883993	129093607,129082373,129044051,129043467,129039096,129003876,128999794,128997939,128992237,128970468,128965318,128959777,128957124,128952840,128948570,128946152,128943188,128936851,128891137,128888774,128884539	Gene ID= ENSG00000151466.11 TPM= 4.67 Transcript Type= protein_coding
chr4	129039193	129093545	129039193	129093545	-	ENST00000511426.5@SCLT1	ENST00000511426.5	protein_coding	129093070,129082306,129043993,129043395,129039193	129093545,129082373,129044051,129043467,129040212	Gene ID= ENSG00000151466.11 TPM= 3.5 Transcript Type= protein_coding
chr4	129093317	129116640	129093317	129116640	+	ENST00000281146.9@C4orf33	ENST00000281146.9	protein_coding	129093317,129102602,129106587,129109307,129109473,129111686	129094028,129102791,129106647,129109358,129109672,129116640	Gene ID= ENSG00000151470.12 TPM= 2.34 Transcript Type= protein_coding
chr4	129096127	129112687	129096127	129112687	+	ENST00000425929.5@C4orf33	ENST00000425929.5	protein_coding	129096127,129102602,129106587,129109307,129109473,129111686	129096209,129102791,129106647,129109358,129109672,129112687	Gene ID= ENSG00000151470.12 TPM= 4.67 Transcript Type= protein_coding
chr4	134196335	134201767	134196335	134201767	-	transcript4036.chr4.nnic@NA	transcript4036.chr4.nnic	NA	134196335	134201767	Gene ID= novel_gene_chr4_4037 TPM= 2.34 Transcript Type= NA
chr4	137519703	137532459	137519703	137532459	-	ENST00000412923.6@PCDH18	ENST00000412923.6	protein_coding	137529602,137528732,137528478,137519703	137532459,137528817,137528641,137521696	Gene ID= ENSG00000189184.11 TPM= 2.34 Transcript Type= protein_coding
chr4	139058273	139177227	139058273	139177227	-	transcript4045.chr4.nic@ELF2	transcript4045.chr4.nic	protein_coding	139176967,139139413,139137630,139125164,139073454,139071866,139067684,139061865,139060324,139058273	139177227,139139497,139137867,139125329,139073567,139072039,139067770,139062057,139060674,139059607	Gene ID= ENSG00000109381.19 TPM= 2.34 Transcript Type= NA
chr4	139057855	139084496	139057855	139084496	-	ENST00000358635.7@ELF2	ENST00000358635.7	protein_coding	139084133,139073454,139071866,139067684,139061865,139060324,139057855	139084496,139073567,139072039,139067770,139062057,139060674,139059607	Gene ID= ENSG00000109381.19 TPM= 3.5 Transcript Type= protein_coding
chr4	139289953	139302526	139289953	139302526	-	ENST00000394225.6@NDUFC1	ENST00000394225.6	protein_coding	139302416,139295732,139295043,139292530,139289953	139302526,139295960,139295146,139292609,139290092	Gene ID= ENSG00000109390.11 TPM= 35.03 Transcript Type= processed_transcript
chr4	139289917	139301210	139289917	139301210	-	ENST00000539002.5@NDUFC1	ENST00000539002.5	protein_coding	139300602,139295732,139295043,139292530,139289917	139301210,139295960,139295146,139292609,139290092	Gene ID= ENSG00000109390.11 TPM= 43.2 Transcript Type= protein_coding
chr4	139301455	139391382	139301455	139391382	+	ENST00000296543.9@NAA15	ENST00000296543.9	protein_coding	139301455,139334174,139336848,139340912,139342826,139344186,139349462,139351191,139351505,139354026,139357386,139359743,139360500,139361724,139370211,139376365,139378756,139384832,139386133,139387884	139301831,139334258,139336952,139341069,139342960,139344339,139349581,139351286,139351611,139354098,139357555,139359895,139360628,139361937,139370404,139376473,139378854,139384978,139386230,139391382	Gene ID= ENSG00000164134.12 TPM= 24.52 Transcript Type= protein_coding
chr4	139506036	139556774	139506036	139556774	-	ENST00000274031.7@SETD7	ENST00000274031.7	protein_coding	139556098,139546920,139533165,139529031,139523354,139520277,139517885,139506036	139556774,139547049,139533366,139529220,139523435,139520394,139518042,139511843	Gene ID= ENSG00000145391.13 TPM= 31.53 Transcript Type= protein_coding
chr4	139542178	139543812	139542178	139543812	+	transcript4081.chr4.nnic@NA	transcript4081.chr4.nnic	NA	139542178	139543812	Gene ID= novel_gene_chr4_4082 TPM= 4.67 Transcript Type= NA
chr4	139554962	139556282	139554962	139556282	-	transcript4083.chr4.nnic@NA	transcript4083.chr4.nnic	NA	139554962	139556282	Gene ID= novel_gene_chr4_4084 TPM= 2.34 Transcript Type= NA
chr4	139665768	139704253	139665768	139704253	+	ENST00000265498.5@MGST2	ENST00000265498.5	protein_coding	139665768,139678543,139695197,139703455,139704016	139666077,139678642,139695267,139703536,139704253	Gene ID= ENSG00000085871.8 TPM= 28.02 Transcript Type= protein_coding
chr4	139716753	140154184	139716753	140154184	-	ENST00000509479.6@MAML3	ENST00000509479.6	protein_coding	140152860,139889357,139730416,139725751,139716753	140154184,139890967,139730667,139725835,139720323	Gene ID= ENSG00000196782.12 TPM= 15.18 Transcript Type= protein_coding
chr4	139763083	139765306	139763083	139765306	+	transcript4089.chr4.nnic@NA	transcript4089.chr4.nnic	NA	139763083	139765306	Gene ID= novel_gene_chr4_4090 TPM= 2.34 Transcript Type= NA
chr4	140343461	140382556	140343461	140382556	+	ENST00000394203.7@SCOC	ENST00000394203.7	protein_coding	140343461,140379121,140379569,140380962	140343708,140379192,140379652,140382556	Gene ID= ENSG00000153130.17 TPM= 4.47 Transcript Type= protein_coding
chr4	140373510	140382556	140373510	140382556	+	ENST00000614192.4@SCOC	ENST00000614192.4	protein_coding	140373510,140379121,140379569,140380962	140373717,140379192,140379652,140382556	Gene ID= ENSG00000153130.17 TPM= 80.37 Transcript Type= protein_coding
chr4	140373536	140382545	140373536	140382545	+	ENST00000506597.1@SCOC	ENST00000506597.1	protein_coding	140373536,140379121,140380962	140373717,140379192,140382545	Gene ID= ENSG00000153130.17 TPM= 7.39 Transcript Type= protein_coding
chr4	140388455	140427968	140388455	140427968	-	ENST00000325617.9@CLGN	ENST00000325617.9	protein_coding	140427537,140412935,140410553,140409837,140405942,140401985,140400357,140398851,140396092,140395819,140393826,140392586,140392219,140390628,140388455	140427968,140413087,140410626,140409895,140406083,140402066,140400549,140399040,140396205,140395969,140394041,140392711,140392378,140390728,140389304	Gene ID= ENSG00000153132.12 TPM= 2.34 Transcript Type= protein_coding
chr4	140524158	140553770	140524158	140553770	+	ENST00000323570.7@ELMOD2	ENST00000323570.7	protein_coding	140524158,140525420,140527466,140535733,140537412,140540168,140542574,140543453,140550230	140524280,140525570,140527494,140535830,140537541,140540301,140542642,140543586,140553770	Gene ID= ENSG00000179387.9 TPM= 4.67 Transcript Type= protein_coding
chr4	140620765	140756120	140620765	140756120	-	ENST00000442267.2@TBC1D9	ENST00000442267.2	protein_coding	140755916,140701504,140686344,140679615,140678942,140676894,140670720,140669634,140668917,140661893,140659588,140657527,140657097,140639330,140639086,140633948,140628300,140627441,140624314,140624116,140620765	140756120,140701614,140686462,140679843,140679203,140677101,140670926,140669804,140669067,140662107,140659705,140657812,140657226,140639428,140639154,140634188,140628365,140627527,140624388,140624219,140622917	Gene ID= ENSG00000109436.7 TPM= 36.2 Transcript Type= protein_coding
chr4	141220898	141234697	141220898	141234697	+	transcript4117.chr4.nic@ZNF330	transcript4117.chr4.nic	protein_coding	141220898,141222366,141224487,141224607,141226767,141229571,141230166,141231439,141232525,141233715	141221077,141222491,141224506,141224677,141226846,141229697,141230270,141231485,141232642,141234697	Gene ID= ENSG00000109445.10 TPM= 3.5 Transcript Type= NA
chr4	141220934	141234483	141220934	141234483	+	transcript4119.chr4.nic@ZNF330	transcript4119.chr4.nic	protein_coding	141220934,141224607,141226767,141229571,141230166,141231439,141232525,141233715	141224506,141224677,141226846,141229697,141230270,141231485,141232642,141234483	Gene ID= ENSG00000109445.10 TPM= 3.5 Transcript Type= NA
chr4	141220887	141234697	141220887	141234697	+	ENST00000262990.8@ZNF330	ENST00000262990.8	protein_coding	141220887,141222366,141224487,141224607,141226767,141229571,141230166,141231439,141232525,141233715	141221108,141222491,141224506,141224677,141226846,141229697,141230270,141231485,141232642,141234697	Gene ID= ENSG00000109445.10 TPM= 18.68 Transcript Type= protein_coding
chr4	141636570	141733182	141636570	141733182	+	transcript4126.chr4.nnic@IL15	transcript4126.chr4.nnic	protein_coding	141636570,141656186,141688822,141719366,141720469,141721924,141727940,141729847,141732738	141636748,141656307,141688904,141719476,141720566,141722008,141727984,141729984,141733182	Gene ID= ENSG00000164136.16 TPM= 2.34 Transcript Type= NA
chr4	141636602	141733987	141636602	141733987	+	ENST00000296545.11@IL15	ENST00000296545.11	protein_coding	141636602,141656186,141719366,141720469,141721924,141727940,141729847,141732738	141637224,141656307,141719476,141720566,141722008,141727984,141729984,141733987	Gene ID= ENSG00000164136.16 TPM= 1.17 Transcript Type= protein_coding
chr4	141636599	141733435	141636599	141733435	+	ENST00000320650.8@IL15	ENST00000320650.8	protein_coding	141636599,141656186,141719366,141720469,141721924,141727940,141729847,141732738	141636748,141656307,141719476,141720566,141722008,141727984,141729984,141733435	Gene ID= ENSG00000164136.16 TPM= 2.34 Transcript Type= protein_coding
chr4	142028033	142462753	142028033	142462753	-	ENST00000262992.8@INPP4B	ENST00000262992.8	protein_coding	142462663,142431169,142429173,142405206,142402938,142314712,142305458,142270663,142260492,142237864,142208896,142208425,142193087,142173632,142160358,142145840,142124588,142123292,142122128,142112542,142108093,142086144,142082031,142028033	142462753,142431385,142429217,142405324,142403054,142314762,142305537,142270774,142260564,142238011,142209026,142208529,142193195,142173809,142160561,142145996,142124760,142123415,142122245,142112682,142108190,142086256,142082185,142028914	Gene ID= ENSG00000109452.12 TPM= 1.17 Transcript Type= protein_coding
chr4	142028745	142405434	142028745	142405434	-	transcript4138.chr4.nic@INPP4B	transcript4138.chr4.nic	protein_coding	142405206,142402938,142314712,142305458,142270663,142260492,142237864,142208896,142208425,142193087,142173632,142160358,142145840,142124588,142123292,142122128,142112542,142108093,142086144,142082031,142028745	142405434,142403054,142314762,142305537,142270774,142260564,142238011,142209026,142208529,142193195,142173809,142160561,142145996,142124760,142123415,142122245,142112682,142108190,142086256,142082185,142028914	Gene ID= ENSG00000109452.12 TPM= 2.34 Transcript Type= NA
chr4	142028745	142305944	142028745	142305944	-	transcript4139.chr4.nic@INPP4B	transcript4139.chr4.nic	protein_coding	142305877,142305458,142270663,142260492,142237864,142208896,142208425,142193087,142173632,142160358,142145840,142124588,142123292,142122128,142112542,142108093,142086144,142082031,142028745	142305944,142305537,142270774,142260564,142238011,142209026,142208529,142193195,142173809,142160561,142145996,142124760,142123415,142122245,142112682,142108190,142086256,142082185,142028914	Gene ID= ENSG00000109452.12 TPM= 2.34 Transcript Type= NA
chr4	143184917	143215577	143184917	143215577	+	ENST00000510377.5@USP38	ENST00000510377.5	protein_coding	143184917,143187826,143195716,143197823,143203408,143206033,143209564,143212318,143213581	143186132,143187961,143195845,143197924,143203566,143206226,143209657,143212424,143215577	Gene ID= ENSG00000170185.9 TPM= 2.34 Transcript Type= protein_coding
chr4	143184945	143223830	143184945	143223830	+	ENST00000307017.8@USP38	ENST00000307017.8	protein_coding	143184945,143187826,143195716,143197823,143203408,143206033,143209564,143212318,143213581,143220295	143186132,143187961,143195845,143197924,143203566,143206226,143209657,143212424,143214943,143223830	Gene ID= ENSG00000170185.9 TPM= 2.34 Transcript Type= protein_coding
chr4	143336762	143474568	143336762	143474568	+	ENST00000262995.8@GAB1	ENST00000262995.8	protein_coding	143336762,143415477,143433491,143437999,143439802,143440079,143457680,143459385,143460364,143466103,143469031	143337260,143415771,143433716,143438600,143439887,143440382,143457769,143459478,143460487,143466225,143474568	Gene ID= ENSG00000109458.8 TPM= 2.34 Transcript Type= protein_coding
chr4	143513483	143554368	143513483	143554368	+	transcript4160.chr4.nic@SMARCA5	transcript4160.chr4.nic	protein_coding	143513483,143517355,143521429,143524367,143525451,143526281,143527868,143528583,143530458,143534855,143536452,143538590,143540363,143543509,143543853,143544737,143545470,143545925,143546776,143547385,143547928,143549997,143553119	143514101,143517429,143521595,143524467,143525551,143526460,143528023,143528714,143530526,143534964,143536678,143538938,143540495,143543657,143543972,143544847,143545583,143546047,143546908,143547503,143548140,143550104,143554368	Gene ID= ENSG00000153147.5 TPM= 8.17 Transcript Type= NA
chr4	143870867	143912289	143870867	143912289	-	transcript4167.chr4.nnic@GYPE	transcript4167.chr4.nnic	protein_coding	143911516,143880411,143876746,143870867	143912289,143880509,143876855,143872252	Gene ID= ENSG00000197465.13 TPM= 2.34 Transcript Type= NA
chr4	144642919	144647146	144642919	144647146	-	transcript4185.chr4.nnic@GYPA	transcript4185.chr4.nnic	protein_coding	144646967,144642919	144647146,144643734	Gene ID= ENSG00000170180.20 TPM= 2.34 Transcript Type= NA
chr4	144642922	144645987	144642922	144645987	-	ENST00000508269.1@HHIP-AS1	ENST00000508269.1	antisense_RNA	144645707,144642922	144645987,144643734	Gene ID= ENSG00000248890.1 TPM= 25.69 Transcript Type= antisense_RNA
chr4	144646155	144745271	144646155	144745271	+	transcript4169.chr4.nnic@HHIP	transcript4169.chr4.nnic	protein_coding	144646155,144652605,144658790,144659637,144706531,144707087,144708168,144711950,144714225,144715300,144718875,144734741,144737764,144738719,144743009	144646954,144652797,144658946,144659838,144706682,144707260,144708311,144712071,144714348,144715430,144718956,144734889,144737892,144742970,144745271	Gene ID= ENSG00000164161.9 TPM= 24.72 Transcript Type= NA
chr4	144646155	144685665	144646155	144685665	+	transcript4180.chr4.nic@HHIP	transcript4180.chr4.nic	protein_coding	144646155,144652605,144658790,144659637,144685601	144646954,144652797,144658946,144659838,144685665	Gene ID= ENSG00000164161.9 TPM= 5.84 Transcript Type= NA
chr4	144646133	144707658	144646133	144707658	+	transcript4181.chr4.nic@HHIP	transcript4181.chr4.nic	protein_coding	144646133,144652605,144658790,144659637,144706531	144646954,144652797,144658946,144659838,144707658	Gene ID= ENSG00000164161.9 TPM= 13.63 Transcript Type= NA
chr4	144646136	144659857	144646136	144659857	+	transcript4183.chr4.nic@HHIP	transcript4183.chr4.nic	protein_coding	144646136,144652605,144658790	144646954,144652797,144659857	Gene ID= ENSG00000164161.9 TPM= 19.27 Transcript Type= NA
chr4	144646172	144660273	144646172	144660273	+	ENST00000434550.2@HHIP	ENST00000434550.2	protein_coding	144646172,144652605,144658790,144659637	144646954,144652797,144658946,144660273	Gene ID= ENSG00000164161.9 TPM= 4.09 Transcript Type= protein_coding
chr4	144995158	145098205	144995158	145098205	-	transcript4197.chr4.nnic@ANAPC10	transcript4197.chr4.nnic	protein_coding	145098120,145095985,145081660,145064572,145033042,144995158	145098205,145096111,145081750,145064692,145033371,144995603	Gene ID= ENSG00000164162.13 TPM= 2.34 Transcript Type= NA
chr4	144995158	145098213	144995158	145098213	-	ENST00000309439.9@ANAPC10	ENST00000309439.9	protein_coding	145098131,145095985,145081660,145064572,144995158	145098213,145096111,145081750,145064692,144995603	Gene ID= ENSG00000164162.13 TPM= 5.84 Transcript Type= protein_coding
chr4	144995196	145098205	144995196	145098205	-	transcript4208.chr4.nic@ANAPC10	transcript4208.chr4.nic	protein_coding	145098120,145095985,145081660,144995196	145098205,145096111,145081750,144995603	Gene ID= ENSG00000164162.13 TPM= 2.34 Transcript Type= NA
chr4	144995196	145098191	144995196	145098191	-	ENST00000511466.5@ANAPC10	ENST00000511466.5	protein_coding	145098131,145095985,145081660,144995196	145098191,145096111,145081750,144995603	Gene ID= ENSG00000164162.13 TPM= 2.34 Transcript Type= processed_transcript
chr4	145097932	145129179	145097932	145129179	+	ENST00000296577.8@ABCE1	ENST00000296577.8	protein_coding	145097932,145104386,145105605,145108015,145109132,145110103,145110375,145110968,145112239,145117293,145119932,145121174,145121333,145123021,145123215,145123478,145124990,145127526	145098419,145104515,145105690,145108112,145109249,145110240,145110444,145111064,145112328,145117414,145120153,145121233,145121391,145123131,145123357,145123600,145125101,145129179	Gene ID= ENSG00000164163.10 TPM= 61.88 Transcript Type= protein_coding
chr4	145137134	145180161	145137134	145180161	-	ENST00000447906.6@OTUD4	ENST00000447906.6	protein_coding	145179815,145174661,145171670,145165151,145164154,145162640,145159503,145155936,145155569,145155411,145152541,145150802,145150513,145146267,145144311,145143946,145143365,145142196,145141379,145139951,145137134	145180161,145174744,145171720,145165197,145164226,145162721,145159635,145155996,145155686,145155475,145152635,145150905,145150699,145146429,145144434,145144001,145143445,145142334,145141639,145139991,145138650	Gene ID= ENSG00000164164.15 TPM= 3.5 Transcript Type= protein_coding
chr4	145480794	145558079	145480794	145558079	+	transcript4215.chr4.nnic@SMAD1	transcript4215.chr4.nnic	protein_coding	145480794,145514438,145539804,145542582,145546703,145553784,145557791	145481091,145515013,145540061,145542698,145546924,145554040,145558079	Gene ID= ENSG00000170365.9 TPM= 2.34 Transcript Type= NA
chr4	145481572	145558079	145481572	145558079	+	transcript4216.chr4.nic@SMAD1	transcript4216.chr4.nic	protein_coding	145481572,145514438,145539804,145542582,145546703,145553784,145557791	145481752,145515013,145540061,145542698,145546924,145554040,145558079	Gene ID= ENSG00000170365.9 TPM= 5.84 Transcript Type= NA
chr4	145482811	145558079	145482811	145558079	+	ENST00000515385.1@SMAD1	ENST00000515385.1	protein_coding	145482811,145514438,145539804,145542582,145546703,145553784,145557791	145483176,145515013,145540061,145542698,145546924,145554040,145558079	Gene ID= ENSG00000170365.9 TPM= 1.17 Transcript Type= protein_coding
chr4	145481792	145558079	145481792	145558079	+	ENST00000302085.8@SMAD1	ENST00000302085.8	protein_coding	145481792,145514438,145539804,145542582,145546703,145553784,145557791	145482038,145515013,145540061,145542698,145546924,145554040,145558079	Gene ID= ENSG00000170365.9 TPM= 17.51 Transcript Type= protein_coding
chr4	145618263	145660035	145618263	145660035	+	ENST00000281317.9@MMAA	ENST00000281317.9	protein_coding	145618263,145639075,145642363,145645986,145651062,145653994,145655147	145619407,145639578,145642485,145646156,145651147,145654143,145660035	Gene ID= ENSG00000151611.13 TPM= 4.67 Transcript Type= protein_coding
chr4	145757627	145938635	145757627	145938635	-	ENST00000508784.5@ZNF827	ENST00000508784.5	protein_coding	145938365,145902166,145892243,145885678,145870245,145849322,145845956,145823422,145779374,145775789,145774506,145765547,145764988,145763090,145757627	145938635,145903215,145892415,145886158,145870478,145849561,145846013,145823525,145779511,145775960,145774672,145765738,145765165,145763122,145761598	Gene ID= ENSG00000151612.15 TPM= 2.34 Transcript Type= protein_coding
chr4	146175685	146191535	146175685	146191535	+	ENST00000296581.10@LSM6	ENST00000296581.10	protein_coding	146175685,146182912,146187274,146189622	146175811,146183015,146187387,146191535	Gene ID= ENSG00000164167.10 TPM= 14.01 Transcript Type= protein_coding
chr4	146254932	146521933	146254932	146521933	-	ENST00000335472.11@SLC10A7	ENST00000335472.11	protein_coding	146521618,146517038,146509913,146503849,146442783,146325961,146305926,146293930,146292929,146283192,146258692,146254932	146521933,146517120,146510049,146503924,146442821,146325996,146306009,146294095,146292980,146283265,146258837,146256520	Gene ID= ENSG00000120519.14 TPM= 1.17 Transcript Type= protein_coding
chr4	146442318	146521830	146442318	146521830	-	ENST00000511315.1@SLC10A7	ENST00000511315.1	protein_coding	146521618,146517038,146509913,146503849,146442318	146521830,146517120,146510049,146503924,146442821	Gene ID= ENSG00000120519.14 TPM= 1.17 Transcript Type= processed_transcript
chr4	147481074	147488407	147481074	147488407	+	transcript4242.chr4.nic@EDNRA	transcript4242.chr4.nic	protein_coding	147481074,147485612	147481376,147488407	Gene ID= ENSG00000151617.15 TPM= 2.34 Transcript Type= NA
chr4	147480932	147544954	147480932	147544954	+	ENST00000324300.9@EDNRA	ENST00000324300.9	protein_coding	147480932,147485612,147519851,147532506,147535877,147539817,147540377,147542478	147481376,147486101,147519978,147532704,147536029,147539950,147540485,147544954	Gene ID= ENSG00000151617.15 TPM= 35.03 Transcript Type= protein_coding
chr4	147637785	147684230	147637785	147684230	-	ENST00000322396.6@PRMT9	ENST00000322396.6	protein_coding	147683799,147680323,147673638,147672959,147670641,147668539,147660846,147657792,147653852,147642787,147638960,147637785	147684230,147680471,147673874,147673126,147670743,147668645,147661038,147657975,147654566,147642940,147639082,147638747	Gene ID= ENSG00000164169.12 TPM= 10.51 Transcript Type= protein_coding
chr4	147638385	147684169	147638385	147684169	-	transcript4246.chr4.nnic@PRMT9	transcript4246.chr4.nnic	protein_coding	147683799,147673638,147672959,147670641,147668539,147660846,147657792,147653852,147642787,147638960,147638385	147684169,147673874,147673126,147670708,147668645,147661038,147657975,147654566,147642940,147639082,147638747	Gene ID= ENSG00000164169.12 TPM= 2.34 Transcript Type= NA
chr4	147638385	147684125	147638385	147684125	-	ENST00000514886.1@PRMT9	ENST00000514886.1	protein_coding	147683799,147673638,147672959,147670641,147668539,147660846,147657792,147653852,147642787,147638960,147638385	147684125,147673874,147673126,147670743,147668645,147661038,147657975,147654566,147642940,147639082,147638747	Gene ID= ENSG00000164169.12 TPM= 5.84 Transcript Type= nonsense_mediated_decay
chr4	147732088	148072775	147732088	148072775	+	transcript4260.chr4.nic@ARHGAP10	transcript4260.chr4.nic	protein_coding	147732088,147822727,147822896,147847151,147857553,147864846,147866712,147875021,147879232,147881838,147906638,147909732,147913074,147939825,147946617,147955316,147965024,147966680,148023263,148046892,148064416,148071993	147732455,147822822,147822957,147847222,147857654,147864956,147866816,147875150,147879338,147881932,147906719,147909777,147913139,147939899,147946704,147955374,147965129,147966839,148023413,148047051,148064507,148072775	Gene ID= ENSG00000071205.11 TPM= 3.5 Transcript Type= NA
chr4	147732063	148072780	147732063	148072780	+	ENST00000336498.7@ARHGAP10	ENST00000336498.7	protein_coding	147732063,147822727,147822896,147847151,147857553,147864846,147866712,147875021,147879232,147881838,147906638,147909732,147913074,147939825,147946617,147955316,147965024,147966680,148023263,148046892,148063148,148064416,148071993	147732455,147822822,147822957,147847222,147857654,147864956,147866816,147875150,147879338,147881932,147906719,147909777,147913139,147939899,147946704,147955374,147965129,147966839,148023413,148047051,148063300,148064507,148072780	Gene ID= ENSG00000071205.11 TPM= 26.85 Transcript Type= protein_coding
chr4	148078769	148442520	148078769	148442520	-	ENST00000358102.7@NR3C2	ENST00000358102.7	protein_coding	148442160,148435104,148259978,148194746,148154551,148152469,148120158,148114104,148078769	148442520,148436862,148260117,148194862,148154901,148152613,148120288,148114261,148081499	Gene ID= ENSG00000151623.14 TPM= 8.17 Transcript Type= protein_coding
chr4	150078186	150257438	150078186	150257438	+	transcript4271.chr4.nic@DCLK2	transcript4271.chr4.nic	protein_coding	150078186,150102478,150193138,150198002,150203795,150220703,150221677,150224501,150232337,150232682,150239742,150240399,150247603,150248305,150249568,150253474,150256020	150079448,150102812,150193240,150198103,150203889,150220778,150221785,150224558,150232456,150232828,150239875,150240476,150247699,150248385,150249684,150253556,150257438	Gene ID= ENSG00000170390.15 TPM= 4.67 Transcript Type= NA
chr4	150078624	150103592	150078624	150103592	+	transcript4277.chr4.nic@DCLK2	transcript4277.chr4.nic	protein_coding	150078624,150102478	150079448,150103592	Gene ID= ENSG00000170390.15 TPM= 2.34 Transcript Type= NA
chr4	151012805	151015284	151012805	151015284	-	ENST00000514435.1@LRBA	ENST00000514435.1	protein_coding	151015202,151012805	151015284,151014861	Gene ID= ENSG00000198589.10 TPM= 2.34 Transcript Type= retained_intron
chr4	151099573	151104652	151099573	151104652	+	ENST00000274065.8@RPS3A	ENST00000274065.8	protein_coding	151099573,151100485,151100975,151102871,151104177,151104472	151099714,151100588,151101162,151103079,151104286,151104652	Gene ID= ENSG00000145425.9 TPM= 1222.47 Transcript Type= protein_coding
chr4	151099624	151104637	151099624	151104637	+	ENST00000509736.5@RPS3A	ENST00000509736.5	protein_coding	151099624,151102871,151104177,151104472	151099714,151103079,151104286,151104637	Gene ID= ENSG00000145425.9 TPM= 7.97 Transcript Type= protein_coding
chr4	151099671	151104637	151099671	151104637	+	ENST00000515792.5@RPS3A	ENST00000515792.5	protein_coding	151099671,151100485,151100975,151102871,151104177,151104472	151099714,151100588,151101012,151103079,151104286,151104637	Gene ID= ENSG00000145425.9 TPM= 1.55 Transcript Type= protein_coding
chr4	151120284	151227904	151120284	151227904	-	transcript4293.chr4.nic@SH3D19	transcript4293.chr4.nic	protein_coding	151227760,151226047,151187423,151179355,151176817,151176534,151174670,151165589,151159240,151149500,151147922,151144220,151143910,151139775,151137732,151135074,151133034,151132331,151128170,151127618,151120284	151227904,151226086,151187463,151179397,151176955,151176687,151175674,151165696,151159352,151149561,151148186,151144288,151144050,151139847,151137862,151135132,151133236,151132383,151128356,151127715,151122207	Gene ID= ENSG00000109686.17 TPM= 8.64 Transcript Type= NA
chr4	151120284	151325620	151120284	151325620	-	transcript4294.chr4.nic@SH3D19	transcript4294.chr4.nic	protein_coding	151325241,151226047,151187423,151179355,151176817,151176534,151174670,151165589,151159240,151149500,151147922,151144220,151143910,151139775,151137732,151135074,151133034,151132331,151128170,151127618,151120284	151325620,151226086,151187463,151179397,151176955,151176687,151175674,151165696,151159352,151149561,151148186,151144288,151144050,151139847,151137862,151135132,151133236,151132383,151128356,151127715,151122207	Gene ID= ENSG00000109686.17 TPM= 8.64 Transcript Type= NA
chr4	151120284	151228030	151120284	151228030	-	transcript4296.chr4.nic@SH3D19	transcript4296.chr4.nic	protein_coding	151227760,151226168,151226047,151187423,151179355,151176817,151176534,151174670,151165589,151159240,151149500,151147922,151143910,151139775,151137732,151135074,151133034,151132331,151128170,151127618,151120284	151228030,151226240,151226086,151187463,151179397,151176955,151176687,151175674,151165696,151159352,151149561,151148186,151144050,151139847,151137862,151135132,151133236,151132383,151128356,151127715,151122207	Gene ID= ENSG00000109686.17 TPM= 11.61 Transcript Type= NA
chr4	151120279	151226598	151120279	151226598	-	ENST00000409598.8@SH3D19	ENST00000409598.8	protein_coding	151226168,151226047,151187423,151179355,151176817,151176525,151174670,151165589,151159240,151149500,151147922,151143910,151139775,151137732,151135074,151133034,151132331,151128170,151127618,151120279	151226598,151226086,151187463,151179397,151176955,151176687,151175674,151165696,151159352,151149561,151148186,151144050,151139847,151137862,151135132,151133236,151132383,151128356,151127715,151122207	Gene ID= ENSG00000109686.17 TPM= 12.77 Transcript Type= protein_coding
chr4	151120287	151228030	151120287	151228030	-	ENST00000514152.5@SH3D19	ENST00000514152.5	protein_coding	151227760,151226047,151187423,151179355,151176817,151176534,151174670,151165589,151159240,151149500,151147922,151143910,151139775,151137732,151135074,151133034,151132331,151128170,151127618,151120287	151228030,151226086,151187463,151179397,151176955,151176687,151175674,151165696,151159352,151149561,151148186,151144050,151139847,151137862,151135132,151133236,151132383,151128356,151127715,151122207	Gene ID= ENSG00000109686.17 TPM= 15.81 Transcript Type= protein_coding
chr4	151120287	151325632	151120287	151325632	-	ENST00000604030.6@SH3D19	ENST00000604030.6	protein_coding	151325241,151226047,151187423,151179355,151176817,151176534,151174670,151165589,151159240,151149500,151147922,151143910,151139775,151137732,151135074,151133034,151132331,151128170,151127618,151120287	151325632,151226086,151187463,151179397,151176955,151176687,151175674,151165696,151159352,151149561,151148186,151144050,151139847,151137862,151135132,151133236,151132383,151128356,151127715,151122207	Gene ID= ENSG00000109686.17 TPM= 42.66 Transcript Type= protein_coding
chr4	151169444	151174111	151169444	151174111	+	transcript4346.chr4.nnic@NA	transcript4346.chr4.nnic	NA	151169444,151171232	151169571,151174111	Gene ID= novel_gene_chr4_4347 TPM= 2.34 Transcript Type= NA
chr4	151670504	151761023	151670504	151761023	-	ENST00000263985.10@GATB	ENST00000263985.10	protein_coding	151760807,151758772,151719425,151716876,151716009,151707988,151705185,151703851,151701329,151688630,151679813,151672762,151670504	151761023,151758922,151719538,151717074,151716131,151708101,151705269,151703895,151701518,151688763,151679891,151672896,151671302	Gene ID= ENSG00000059691.11 TPM= 2.34 Transcript Type= protein_coding
chr4	151703342	151760985	151703342	151760985	-	ENST00000512306.5@GATB	ENST00000512306.5	protein_coding	151760807,151758772,151719425,151716876,151716009,151707988,151705185,151703342	151760985,151758922,151719538,151717074,151716131,151708101,151705269,151703895	Gene ID= ENSG00000059691.11 TPM= 1.17 Transcript Type= protein_coding
chr4	152322819	152536108	152322819	152536108	-	transcript4354.chr4.nic@FBXW7	transcript4354.chr4.nic	protein_coding	152535127,152534941,152412480,152411303,152350042,152346930,152337802,152332596,152330732,152329672,152328208,152326006,152324184,152322819	152536108,152535033,152412529,152411872,152350124,152347071,152337936,152332719,152330868,152329785,152328389,152326231,152324394,152323149	Gene ID= ENSG00000109670.13 TPM= 2.34 Transcript Type= NA
chr4	152321259	152536091	152321259	152536091	-	transcript4355.chr4.nic@FBXW7	transcript4355.chr4.nic	protein_coding	152535127,152534941,152411303,152350042,152346930,152337802,152332596,152330732,152329672,152328208,152326006,152324184,152321259	152536091,152535033,152411872,152350124,152347071,152337936,152332719,152330868,152329785,152328389,152326231,152324394,152323149	Gene ID= ENSG00000109670.13 TPM= 2.34 Transcript Type= NA
chr4	152321259	152536098	152321259	152536098	-	transcript4356.chr4.nnic@FBXW7	transcript4356.chr4.nnic	protein_coding	152535373,152534941,152411303,152350042,152346930,152337802,152332596,152330732,152329672,152328208,152326006,152324184,152321259	152536098,152535264,152411872,152350124,152347071,152337936,152332719,152330868,152329785,152328389,152326231,152324394,152323149	Gene ID= ENSG00000109670.13 TPM= 2.34 Transcript Type= NA
chr4	152321259	152536101	152321259	152536101	-	ENST00000281708.8@FBXW7	ENST00000281708.8	protein_coding	152534941,152411303,152350042,152346930,152337802,152332596,152330732,152329672,152328208,152326006,152324184,152321259	152536101,152411872,152350124,152347071,152337936,152332719,152330868,152329785,152328389,152326231,152324394,152323149	Gene ID= ENSG00000109670.13 TPM= 1.17 Transcript Type= protein_coding
chr4	152321263	152352971	152321263	152352971	-	ENST00000263981.9@FBXW7	ENST00000263981.9	protein_coding	152352470,152350042,152346930,152337802,152332596,152330732,152329672,152328208,152326006,152324184,152321263	152352971,152350124,152347071,152337936,152332719,152330868,152329785,152328389,152326231,152324394,152323149	Gene ID= ENSG00000109670.13 TPM= 2.34 Transcript Type= protein_coding
chr4	152321259	152382515	152321259	152382515	-	ENST00000296555.9@FBXW7	ENST00000296555.9	protein_coding	152382189,152350042,152346930,152337802,152332596,152330732,152329672,152328208,152326006,152324184,152321259	152382515,152350124,152347071,152337936,152332719,152330868,152329785,152328389,152326231,152324394,152323149	Gene ID= ENSG00000109670.13 TPM= 2.34 Transcript Type= protein_coding
chr4	152536264	152539263	152536264	152539263	+	ENST00000604157.1@LINC02486	ENST00000604157.1	lincRNA	152536264	152539263	Gene ID= ENSG00000268471.6 TPM= 4.67 Transcript Type= lincRNA
chr4	152618632	152680165	152618632	152680165	-	ENST00000304385.7@TMEM154	ENST00000304385.7	protein_coding	152679870,152652667,152652538,152644415,152643088,152640928,152618632	152680165,152652927,152652576,152644442,152643173,152640985,152628561	Gene ID= ENSG00000170006.11 TPM= 2.34 Transcript Type= protein_coding
chr4	152779983	152911909	152779983	152911909	+	transcript4376.chr4.nnic@ARFIP1	transcript4376.chr4.nnic	protein_coding	152779983,152829625,152836053,152863606,152870753,152872452,152880963,152882723,152888133,152910064	152780226,152829726,152836178,152863714,152870848,152872564,152881184,152882880,152888307,152911909	Gene ID= ENSG00000164144.15 TPM= 3.5 Transcript Type= NA
chr4	152779965	152911909	152779965	152911909	+	transcript4378.chr4.nnic@ARFIP1	transcript4378.chr4.nnic	protein_coding	152779965,152790759,152829625,152863606,152870753,152872452,152880963,152882723,152888133,152910064	152780091,152790875,152829726,152863714,152870848,152872564,152881184,152882880,152888307,152911909	Gene ID= ENSG00000164144.15 TPM= 2.34 Transcript Type= NA
chr4	152779972	152911909	152779972	152911909	+	transcript4379.chr4.nnic@ARFIP1	transcript4379.chr4.nnic	protein_coding	152779972,152790759,152829625,152863606,152870753,152872452,152880963,152882723,152888133,152910064	152780226,152790875,152829726,152863714,152870848,152872564,152881184,152882880,152888307,152911909	Gene ID= ENSG00000164144.15 TPM= 3.5 Transcript Type= NA
chr4	152779839	152833257	152779839	152833257	+	transcript4388.chr4.nic@ARFIP1	transcript4388.chr4.nic	protein_coding	152779839,152829625	152780226,152833257	Gene ID= ENSG00000164144.15 TPM= 2.34 Transcript Type= NA
chr4	152779937	152911909	152779937	152911909	+	ENST00000353617.6@ARFIP1	ENST00000353617.6	protein_coding	152779937,152829625,152863606,152870753,152872452,152880963,152882723,152888133,152910064	152780226,152829726,152863714,152870848,152872564,152881184,152882880,152888307,152911909	Gene ID= ENSG00000164144.15 TPM= 58.38 Transcript Type= protein_coding
chr4	152938192	152943299	152938192	152943299	-	transcript4392.chr4.nnic@NA	transcript4392.chr4.nnic	NA	152938192	152943299	Gene ID= novel_gene_chr4_4393 TPM= 14.01 Transcript Type= NA
chr4	153204446	153310261	153204446	153310261	+	ENST00000494872.5@TRIM2	ENST00000494872.5	protein_coding	153204446,153270335,153275893,153292982,153294305,153295313,153309655	153204560,153270519,153276130,153293133,153294485,153296036,153310261	Gene ID= ENSG00000109654.14 TPM= 1.17 Transcript Type= protein_coding
chr4	153204466	153339320	153204466	153339320	+	ENST00000338700.9@TRIM2	ENST00000338700.9	protein_coding	153204466,153270335,153275893,153292982,153294305,153295313,153315485,153315832,153322648,153324078,153328530,153334814	153204560,153270519,153276130,153293133,153294485,153296036,153315588,153315999,153322816,153324148,153328670,153339320	Gene ID= ENSG00000109654.14 TPM= 10.51 Transcript Type= protein_coding
chr4	153466349	153636711	153466349	153636711	+	ENST00000409959.7@TMEM131L	ENST00000409959.7	protein_coding	153466349,153467211,153473845,153550073,153555787,153556966,153558258,153580826,153581407,153583190,153583564,153584835,153585458,153586209,153587742,153588890,153591053,153592475,153593799,153596258,153598590,153602152,153602542,153603303,153603802,153612252,153620756,153621683,153622898,153626147,153627605,153632718,153634192,153635432,153636301	153466521,153467281,153473888,153550141,153555910,153557082,153558368,153580903,153581560,153583248,153583672,153584931,153585611,153586379,153587811,153589007,153591194,153592584,153593871,153596385,153598732,153602338,153602727,153603452,153604430,153612400,153620880,153621849,153623083,153626225,153627687,153632838,153634280,153635571,153636711	Gene ID= ENSG00000121210.15 TPM= 9.34 Transcript Type= protein_coding
chr4	153684280	153705452	153684280	153705452	+	transcript4417.chr4.nnic@TLR2	transcript4417.chr4.nnic	protein_coding	153684280,153687902,153702227,153702892	153684360,153688047,153702510,153705452	Gene ID= ENSG00000137462.6 TPM= 2.34 Transcript Type= NA
chr4	153684030	153705452	153684030	153705452	+	transcript4418.chr4.nnic@TLR2	transcript4418.chr4.nnic	protein_coding	153684030,153687902,153702892	153684360,153687988,153705452	Gene ID= ENSG00000137462.6 TPM= 3.5 Transcript Type= NA
chr4	153684030	153705702	153684030	153705702	+	transcript4420.chr4.nnic@TLR2	transcript4420.chr4.nnic	protein_coding	153684030,153687902,153702892	153684360,153688047,153705702	Gene ID= ENSG00000137462.6 TPM= 15 Transcript Type= NA
chr4	153684271	153705702	153684271	153705702	+	transcript4425.chr4.nnic@TLR2	transcript4425.chr4.nnic	protein_coding	153684271,153687917,153702892	153684337,153687988,153705702	Gene ID= ENSG00000137462.6 TPM= 3.04 Transcript Type= NA
chr4	153684049	153705702	153684049	153705702	+	transcript4427.chr4.nnic@TLR2	transcript4427.chr4.nnic	protein_coding	153684049,153687917,153702892	153684337,153688047,153705702	Gene ID= ENSG00000137462.6 TPM= 6.83 Transcript Type= NA
chr4	153780592	153789120	153780592	153789120	-	ENST00000274063.4@SFRP2	ENST00000274063.4	protein_coding	153788334,153785864,153780592	153789120,153785944,153781755	Gene ID= ENSG00000145423.4 TPM= 37.36 Transcript Type= protein_coding
chr4	154535006	154550435	154535006	154550435	-	ENST00000499023.6@PLRG1	ENST00000499023.6	protein_coding	154550300,154548829,154547711,154547011,154546123,154545836,154544445,154542187,154540785,154540594,154539951,154539105,154537969,154537286,154535006	154550435,154548935,154547853,154547064,154546213,154545923,154544546,154542279,154540934,154540695,154540053,154539213,154538108,154537479,154536744	Gene ID= ENSG00000171566.11 TPM= 10.51 Transcript Type= protein_coding
chr4	154536619	154550397	154536619	154550397	-	ENST00000302078.9@PLRG1	ENST00000302078.9	protein_coding	154550300,154548829,154547711,154547038,154546123,154545836,154544445,154542187,154540785,154540594,154539951,154539105,154537969,154537286,154536619	154550397,154548935,154547853,154547064,154546213,154545923,154544546,154542279,154540934,154540695,154540053,154539213,154538108,154537479,154536744	Gene ID= ENSG00000171566.11 TPM= 1.17 Transcript Type= protein_coding
chr4	154562956	154571086	154562956	154571086	+	ENST00000302068.8@FGB	ENST00000302068.8	protein_coding	154562956,154565808,154566489,154567593,154568381,154569182,154569514,154570419	154563132,154565999,154566672,154567820,154568494,154569307,154569799,154571086	Gene ID= ENSG00000171564.11 TPM= 1.17 Transcript Type= protein_coding
chr4	154585260	154590766	154585260	154590766	-	ENST00000403106.7@FGA	ENST00000403106.7	protein_coding	154590634,154589437,154588793,154587512,154585260	154590766,154589562,154588976,154587657,154586918	Gene ID= ENSG00000171560.14 TPM= 51.37 Transcript Type= protein_coding
chr4	154604134	154612849	154604134	154612849	-	ENST00000404648.7@FGG	ENST00000404648.7	protein_coding	154612532,154612391,154612018,154611805,154610067,154609630,154608466,154606705,154604897,154604134	154612849,154612435,154612201,154611898,154610197,154609763,154608650,154606982,154605066,154604354	Gene ID= ENSG00000171557.16 TPM= 1083.33 Transcript Type= protein_coding
chr4	154604576	154612648	154604576	154612648	-	ENST00000336098.7@FGG	ENST00000336098.7	protein_coding	154612532,154612391,154612018,154611805,154610067,154609630,154608466,154606705,154604576	154612648,154612435,154612201,154611898,154610197,154609763,154608650,154606982,154605066	Gene ID= ENSG00000171557.16 TPM= 125.32 Transcript Type= protein_coding
chr4	154611973	154612611	154611973	154612611	-	ENST00000484695.1@FGG	ENST00000484695.1	protein_coding	154612532,154612391,154611973	154612611,154612435,154612201	Gene ID= ENSG00000171557.16 TPM= 1.17 Transcript Type= retained_intron
chr4	154744000	154753118	154744000	154753118	+	ENST00000510733.1@LRAT	ENST00000510733.1	protein_coding	154744000,154748984	154744866,154753118	Gene ID= ENSG00000121207.11 TPM= 3.5 Transcript Type= retained_intron
chr4	155342658	155376970	155342658	155376970	-	ENST00000311277.8@MAP9	ENST00000311277.8	protein_coding	155376771,155375776,155374937,155373136,155368586,155362048,155360168,155357449,155355716,155355071,155353179,155352912,155352596,155342658	155376970,155375914,155375021,155373456,155368812,155362141,155360415,155357519,155355884,155355160,155353340,155353057,155352728,155347905	Gene ID= ENSG00000164114.18 TPM= 1.17 Transcript Type= protein_coding
chr4	155667663	155730432	155667663	155730432	+	ENST00000513574.1@GUCY1A3	ENST00000513574.1	protein_coding	155667663,155696756,155703932,155708236,155710542,155713098,155717159,155722038,155730030	155667932,155697122,155703993,155708294,155711251,155713583,155717302,155722192,155730432	Gene ID= ENSG00000164116.16 TPM= 22.18 Transcript Type= protein_coding
chr4	155668414	155672009	155668414	155672009	-	transcript4511.chr4.nnic@NA	transcript4511.chr4.nnic	NA	155668414	155672009	Gene ID= novel_gene_chr4_4512 TPM= 2.34 Transcript Type= NA
chr4	155730080	155737057	155730080	155737057	+	transcript4509.chr4.nnic@NA	transcript4509.chr4.nnic	NA	155730080	155737057	Gene ID= novel_gene_chr4_4510 TPM= 15.18 Transcript Type= NA
chr4	155734448	155737062	155734448	155737062	+	ENST00000569449.1@AC104083.1	ENST00000569449.1	sense_overlapping	155734448	155737062	Gene ID= ENSG00000260244.1 TPM= 3.5 Transcript Type= sense_overlapping
chr4	155759051	155807591	155759051	155807591	+	transcript4514.chr4.nic@GUCY1B3	transcript4514.chr4.nic	protein_coding	155759051,155759787,155774968,155777524,155789714,155793856,155795341,155796377,155799877,155802213,155803624,155804593,155805103,155806386	155759143,155759860,155775068,155777642,155789911,155794086,155795457,155796510,155800074,155802579,155803764,155804747,155805229,155807591	Gene ID= ENSG00000061918.12 TPM= 2.34 Transcript Type= NA
chr4	155758976	155807591	155758976	155807591	+	transcript4520.chr4.nnic@GUCY1B3	transcript4520.chr4.nnic	protein_coding	155758976,155759787,155774968,155777524,155789714,155793856,155795341,155796377,155799877,155802342,155803624,155804593,155805103,155806386	155759143,155760289,155775068,155777642,155789911,155794086,155795457,155796510,155800074,155802579,155803764,155804747,155805229,155807591	Gene ID= ENSG00000061918.12 TPM= 2.34 Transcript Type= NA
chr4	155759059	155807591	155759059	155807591	+	ENST00000264424.12@GUCY1B3	ENST00000264424.12	protein_coding	155759059,155759787,155774968,155777524,155789714,155793856,155795341,155796377,155799877,155802342,155803624,155804593,155805103,155806386	155759143,155759860,155775068,155777642,155789911,155794086,155795457,155796510,155800074,155802579,155803764,155804747,155805229,155807591	Gene ID= ENSG00000061918.12 TPM= 73.56 Transcript Type= protein_coding
chr4	155903695	155920406	155903695	155920406	+	ENST00000536354.2@TDO2	ENST00000536354.2	protein_coding	155903695,155904018,155905067,155907722,155908887,155910025,155911497,155914323,155915855,155917395,155918149,155919837	155903793,155904123,155905157,155907792,155909014,155910211,155911604,155914434,155915912,155917474,155918239,155920406	Gene ID= ENSG00000151790.8 TPM= 2.34 Transcript Type= protein_coding
chr4	155921579	155923252	155921579	155923252	-	transcript4535.chr4.nnic@NA	transcript4535.chr4.nnic	NA	155921579	155923252	Gene ID= novel_gene_chr4_4536 TPM= 2.34 Transcript Type= NA
chr4	155924118	155953917	155924118	155953917	-	ENST00000433477.3@CTSO	ENST00000433477.3	protein_coding	155953713,155943156,155942317,155939371,155937362,155929542,155928336,155924118	155953917,155943264,155942456,155939538,155937483,155929705,155928428,155926070	Gene ID= ENSG00000256043.2 TPM= 142.45 Transcript Type= protein_coding
chr4	156761614	156774617	156761614	156774617	-	transcript4544.chr4.nic@PDGFC	transcript4544.chr4.nic	protein_coding	156774372,156772686,156767773,156761614	156774617,156772893,156767990,156763206	Gene ID= ENSG00000145431.10 TPM= 2.34 Transcript Type= NA
chr4	156761614	156971315	156761614	156971315	-	ENST00000274071.6@PDGFC	ENST00000274071.6	protein_coding	156970786,156861429,156850221,156810837,156772686,156767773,156761614	156971315,156861489,156850416,156811017,156772893,156767990,156763206	Gene ID= ENSG00000145431.10 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr4	157076057	157172090	157076057	157172090	+	ENST00000264428.8@GLRB	ENST00000264428.8	protein_coding	157076057,157077996,157120556,157122330,157136469,157136804,157138809,157143807,157152718,157170432	157076297,157078146,157120662,157122397,157136698,157136886,157138949,157143959,157153010,157172090	Gene ID= ENSG00000109738.10 TPM= 8.17 Transcript Type= protein_coding
chr4	157076125	157172090	157076125	157172090	+	ENST00000541722.5@GLRB	ENST00000541722.5	protein_coding	157076125,157077996,157120556,157122330,157136469,157136804,157138809,157143807,157170432	157076297,157078146,157120662,157122397,157136698,157136886,157138949,157143959,157172090	Gene ID= ENSG00000109738.10 TPM= 3.5 Transcript Type= protein_coding
chr4	158210350	158255287	158210350	158255287	+	transcript4558.chr4.nic@TMEM144	transcript4558.chr4.nic	protein_coding	158210350,158211453,158212061,158212608,158215191,158217321,158219310,158232901,158235438,158237525,158240299,158241509,158244296,158253444	158210586,158211574,158212220,158212776,158215313,158217420,158219390,158232982,158235505,158237643,158240418,158241606,158244349,158255287	Gene ID= ENSG00000164124.10 TPM= 2.92 Transcript Type= NA
chr4	158210401	158255287	158210401	158255287	+	transcript4564.chr4.nic@TMEM144	transcript4564.chr4.nic	protein_coding	158210401,158212608,158215191,158217321,158219310,158232901,158235438,158237525,158240299,158241509,158244296,158253444	158210586,158212776,158215313,158217420,158219390,158232982,158235505,158237643,158240418,158241606,158244349,158255287	Gene ID= ENSG00000164124.10 TPM= 4.09 Transcript Type= NA
chr4	158521726	158653372	158521726	158653372	+	ENST00000307765.9@RXFP1	ENST00000307765.9	protein_coding	158521726,158572698,158593401,158599326,158605068,158607972,158612130,158612291,158617131,158626820,158628638,158633405,158638008,158639260,158644909,158646791,158648499,158651757	158522025,158572835,158593499,158599431,158605139,158608043,158612201,158612362,158617205,158626891,158628709,158633476,158638079,158639331,158645138,158647201,158648717,158653372	Gene ID= ENSG00000171509.15 TPM= 4.67 Transcript Type= protein_coding
chr4	158666679	158672046	158666679	158672046	-	ENST00000379205.4@C4orf46	ENST00000379205.4	protein_coding	158671616,158666679	158672046,158669768	Gene ID= ENSG00000205208.4 TPM= 8.17 Transcript Type= protein_coding
chr4	158672125	158709623	158672125	158709623	+	ENST00000511912.5@ETFDH	ENST00000511912.5	protein_coding	158672125,158680467,158682195,158684592,158685101,158690348,158695497,158697559,158698987,158703423,158706189,158706629,158708364	158672490,158680607,158682424,158684673,158685219,158690425,158695643,158697699,158699130,158703591,158706371,158706850,158709623	Gene ID= ENSG00000171503.11 TPM= 24.52 Transcript Type= protein_coding
chr4	158709134	158723396	158709134	158723396	-	ENST00000307720.3@PPID	ENST00000307720.3	protein_coding	158723204,158721343,158719180,158717012,158715562,158715297,158713119,158710762,158710628,158709134	158723396,158721483,158719286,158717200,158715684,158715403,158713260,158710848,158710670,158709824	Gene ID= ENSG00000171497.4 TPM= 54.88 Transcript Type= protein_coding
chr4	158768984	158905710	158768984	158905710	+	transcript4592.chr4.nnic@FNIP2	transcript4592.chr4.nnic	protein_coding	158768984,158825916,158829079,158831861,158832067,158833528,158833801,158835405,158851321,158859057,158859197,158859578,158861342,158861607,158868102,158870313,158891446,158895750,158904466	158769319,158826042,158829225,158831961,158832138,158833628,158833890,158835476,158851450,158859145,158859258,158859666,158861488,158861776,158869428,158870469,158891646,158895865,158905710	Gene ID= ENSG00000052795.12 TPM= 3.89 Transcript Type= NA
chr4	158769016	158905710	158769016	158905710	+	transcript4594.chr4.nnic@FNIP2	transcript4594.chr4.nnic	protein_coding	158769016,158822513,158825916,158829079,158831861,158832067,158833528,158833801,158835405,158851321,158859057,158859578,158861342,158861607,158868102,158870313,158891446,158895750,158904466	158769319,158822777,158826042,158829225,158831961,158832138,158833628,158833890,158835476,158851450,158859258,158859666,158861488,158861776,158869428,158870469,158891646,158895865,158905710	Gene ID= ENSG00000052795.12 TPM= 4.09 Transcript Type= NA
chr4	158768961	158906817	158768961	158906817	+	transcript4596.chr4.nic@FNIP2	transcript4596.chr4.nic	protein_coding	158768961,158825916,158829079,158831861,158832067,158833528,158833801,158835405,158851321,158859057,158859578,158861342,158861607,158868102,158870313,158891446,158895750,158904466	158769319,158826042,158829225,158831961,158832138,158833628,158833890,158835476,158851450,158859258,158859666,158861488,158861776,158869428,158870469,158891646,158895865,158906817	Gene ID= ENSG00000052795.12 TPM= 15.56 Transcript Type= NA
chr4	158785089	158787845	158785089	158787845	-	transcript4618.chr4.nnic@NA	transcript4618.chr4.nnic	NA	158785089	158787845	Gene ID= novel_gene_chr4_4619 TPM= 7.01 Transcript Type= NA
chr4	158866223	158869300	158866223	158869300	-	transcript4616.chr4.nnic@NA	transcript4616.chr4.nnic	NA	158866223	158869300	Gene ID= novel_gene_chr4_4617 TPM= 15.18 Transcript Type= NA
chr4	159228208	159360169	159228208	159360169	+	transcript4621.chr4.nic@RAPGEF2	transcript4621.chr4.nic	protein_coding	159228208,159238809,159241201,159243774,159304342,159314591,159322347,159323459,159329858,159330334,159331431,159331630,159331926,159332451,159338311,159339114,159341564,159342979,159343281,159344036,159345106,159346789,159350137,159352685,159353487,159355853,159358114	159228357,159238884,159241368,159243791,159304473,159314768,159322483,159323617,159330010,159330498,159331538,159331833,159332034,159332697,159338468,159339354,159341947,159343190,159343404,159344059,159345329,159346998,159350289,159352910,159354046,159356158,159360169	Gene ID= ENSG00000109756.8 TPM= 2.34 Transcript Type= NA
chr4	159267737	159360169	159267737	159360169	+	ENST00000264431.8@RAPGEF2	ENST00000264431.8	protein_coding	159267737,159304342,159314591,159322347,159323459,159329858,159330334,159331431,159331630,159331926,159332451,159338311,159339114,159341564,159342979,159343281,159344036,159345106,159346789,159350137,159352685,159353487,159355853,159358114	159268215,159304473,159314768,159322483,159323617,159330010,159330498,159331538,159331833,159332034,159332697,159338468,159339354,159341947,159343190,159343404,159344059,159345329,159346998,159350289,159352910,159354046,159356158,159360169	Gene ID= ENSG00000109756.8 TPM= 19.85 Transcript Type= protein_coding
chr4	163128669	163166921	163128669	163166921	-	ENST00000274054.2@NAF1	ENST00000274054.2	protein_coding	163166363,163164217,163148341,163145782,163140223,163137199,163133154,163128669	163166921,163164391,163148434,163145864,163140383,163137250,163133256,163129348	Gene ID= ENSG00000145414.8 TPM= 2.34 Transcript Type= protein_coding
chr4	163156964	163166752	163156964	163166752	-	ENST00000502973.1@NAF1	ENST00000502973.1	protein_coding	163166363,163164217,163158225,163156964	163166752,163164391,163158327,163157454	Gene ID= ENSG00000145414.8 TPM= 1.17 Transcript Type= retained_intron
chr4	163124576	163129032	163124576	163129032	-	transcript4630.chr4.nnic@NA	transcript4630.chr4.nnic	NA	163124576	163129032	Gene ID= novel_gene_chr4_4631 TPM= 5.84 Transcript Type= NA
chr4	163323961	163344852	163323961	163344852	-	transcript4632.chr4.nic@NPY1R	transcript4632.chr4.nic	protein_coding	163344305,163325856,163323961	163344852,163326705,163325758	Gene ID= ENSG00000164128.6 TPM= 3.5 Transcript Type= NA
chr4	163494461	163520539	163494461	163520539	+	ENST00000358572.9@TMA16	ENST00000358572.9	protein_coding	163494461,163507033,163512822,163514074,163515313,163517434,163519334	163494804,163507145,163512859,163514158,163515461,163517476,163520539	Gene ID= ENSG00000198498.9 TPM= 14.01 Transcript Type= protein_coding
chr4	163527121	163613534	163527121	163613534	-	ENST00000339875.9@MARCH1	ENST00000339875.9	protein_coding	163613314,163585749,163545596,163527121	163613534,163585929,163545743,163529046	Gene ID= ENSG00000145416.13 TPM= 5.84 Transcript Type= protein_coding
chr4	164956948	164959122	164956948	164959122	+	ENST00000513876.3@FAM218A	ENST00000513876.3	protein_coding	164956948	164959122	Gene ID= ENSG00000250486.3 TPM= 3.5 Transcript Type= protein_coding
chr4	164968283	164977645	164968283	164977645	-	transcript4644.chr4.nic@TRIM61	transcript4644.chr4.nic	protein_coding	164977531,164976688,164968283	164977645,164976825,164970339	Gene ID= ENSG00000183439.7 TPM= 2.34 Transcript Type= NA
chr4	165078788	165112859	165078788	165112859	-	transcript4646.chr4.nic@TMEM192	transcript4646.chr4.nic	protein_coding	165112747,165111649,165102950,165100628,165088468,165085586,165078788	165112859,165111679,165103096,165100892,165088602,165085688,165079796	Gene ID= ENSG00000170088.13 TPM= 5.25 Transcript Type= NA
chr4	165070608	165112919	165070608	165112919	-	ENST00000306480.10@TMEM192	ENST00000306480.10	protein_coding	165112747,165102950,165100628,165088468,165085586,165070608	165112919,165103096,165100892,165088602,165085688,165079796	Gene ID= ENSG00000170088.13 TPM= 11.68 Transcript Type= protein_coding
chr4	165078788	165112887	165078788	165112887	-	transcript4650.chr4.nnic@TMEM192	transcript4650.chr4.nnic	protein_coding	165112747,165102950,165088468,165085586,165078788	165112887,165103096,165088602,165085688,165079796	Gene ID= ENSG00000170088.13 TPM= 2.92 Transcript Type= NA
chr4	165207560	165323153	165207560	165323153	+	transcript4654.chr4.nic@KLHL2	transcript4654.chr4.nic	protein_coding	165207560,165219934,165223938,165228807,165238778,165263197,165294359,165297609,165299507,165305608,165310553,165311464,165313238,165314026,165317826,165322032	165207902,165220059,165224057,165228913,165238899,165263359,165294468,165297725,165299656,165305725,165310750,165311565,165313366,165314166,165317969,165323153	Gene ID= ENSG00000109466.13 TPM= 8.41 Transcript Type= NA
chr4	165207649	165323147	165207649	165323147	+	transcript4656.chr4.nic@KLHL2	transcript4656.chr4.nic	protein_coding	165207649,165219934,165228807,165238778,165263197,165294359,165297609,165299507,165305608,165310553,165311464,165313238,165314026,165317826,165321312,165322032	165207902,165220059,165228913,165238899,165263359,165294468,165297725,165299656,165305725,165310750,165311565,165313366,165314166,165317969,165321375,165323147	Gene ID= ENSG00000109466.13 TPM= 4.9 Transcript Type= NA
chr4	165207600	165323153	165207600	165323153	+	transcript4665.chr4.nic@KLHL2	transcript4665.chr4.nic	protein_coding	165207600,165219934,165228807,165263197,165294359,165297609,165299507,165305608,165310553,165311464,165313238,165314026,165317826,165322032	165207902,165220059,165228913,165263359,165294468,165297725,165299656,165305725,165310750,165311565,165313366,165314166,165317969,165323153	Gene ID= ENSG00000109466.13 TPM= 7.24 Transcript Type= NA
chr4	165207664	165323153	165207664	165323153	+	transcript4666.chr4.nic@KLHL2	transcript4666.chr4.nic	protein_coding	165207664,165219934,165238778,165263197,165294359,165297609,165299507,165305608,165310553,165311464,165313238,165314026,165317826,165322032	165207902,165220059,165238899,165263359,165294468,165297725,165299656,165305725,165310750,165311565,165313366,165314166,165317969,165323153	Gene ID= ENSG00000109466.13 TPM= 6.07 Transcript Type= NA
chr4	165207600	165300314	165207600	165300314	+	transcript4668.chr4.nic@KLHL2	transcript4668.chr4.nic	protein_coding	165207600,165219934,165228807,165238778,165263197,165294359,165297609,165299507	165207902,165220059,165228913,165238899,165263359,165294468,165297725,165300314	Gene ID= ENSG00000109466.13 TPM= 2.34 Transcript Type= NA
chr4	165207618	165323153	165207618	165323153	+	ENST00000226725.10@KLHL2	ENST00000226725.10	protein_coding	165207618,165219934,165228807,165238778,165263197,165294359,165297609,165299507,165305608,165310553,165311464,165313238,165314026,165317826,165322032	165207902,165220059,165228913,165238899,165263359,165294468,165297725,165299656,165305725,165310750,165311565,165313366,165314166,165317969,165323153	Gene ID= ENSG00000109466.13 TPM= 60.95 Transcript Type= protein_coding
chr4	165327623	165343160	165327623	165343160	+	ENST00000261507.10@MSMO1	ENST00000261507.10	protein_coding	165327623,165333340,165337789,165338652,165340221,165341751	165327764,165333625,165337937,165338778,165340375,165343160	Gene ID= ENSG00000052802.12 TPM= 592.82 Transcript Type= protein_coding
chr4	165327686	165343029	165327686	165343029	+	ENST00000393766.6@MSMO1	ENST00000393766.6	protein_coding	165327686,165337789,165338652,165340221,165341751	165327764,165337937,165338778,165340375,165343029	Gene ID= ENSG00000052802.12 TPM= 13.31 Transcript Type= protein_coding
chr4	165378942	165498320	165378942	165498320	+	ENST00000402744.8@CPE	ENST00000402744.8	protein_coding	165378942,165464390,165467688,165482242,165484422,165487438,165493171,165495559,165497512	165379528,165464586,165467855,165482359,165484604,165487577,165493270,165495677,165498320	Gene ID= ENSG00000109472.13 TPM= 141.28 Transcript Type= protein_coding
chr4	165873258	166103895	165873258	166103895	+	ENST00000061240.6@TLL1	ENST00000061240.6	protein_coding	165873258,165989381,165992804,165994381,165995061,166003391,166007943,166014436,166025316,166039339,166042027,166043274,166055076,166057184,166060028,166065683,166074878,166077903,166091128,166099277,166100742	165874073,165989491,165992884,165994533,165995178,166003569,166008048,166014560,166025431,166039441,166042143,166043419,166055271,166057309,166060188,166065863,166075003,166078030,166091341,166099527,166103895	Gene ID= ENSG00000038295.7 TPM= 3.5 Transcript Type= protein_coding
chr4	168216293	168318807	168216293	168318807	-	ENST00000393743.7@DDX60	ENST00000393743.7	protein_coding	168318622,168311256,168310998,168308006,168306379,168302300,168293787,168291748,168288174,168287048,168285393,168284820,168283446,168280335,168276015,168275345,168273934,168273279,168272043,168268854,168267841,168267582,168262683,168262000,168260865,168255711,168252509,168250954,168248188,168246418,168237691,168237286,168236252,168225529,168224243,168221730,168220655,168216293	168318807,168311365,168311067,168308195,168306720,168302416,168293945,168291906,168288315,168287203,168285498,168284935,168283606,168280590,168276181,168275503,168274083,168273398,168272138,168268969,168267983,168267691,168262787,168262128,168260989,168255869,168252656,168251106,168248292,168246618,168237795,168237427,168236373,168225676,168224385,168221881,168220717,168217032	Gene ID= ENSG00000137628.16 TPM= 21.02 Transcript Type= protein_coding
chr4	168356735	168480514	168356735	168480514	-	ENST00000511577.5@DDX60L	ENST00000511577.5	protein_coding	168480377,168472696,168472455,168471747,168461699,168457892,168456039,168453124,168448638,168441337,168433010,168432455,168430478,168427070,168423608,168422524,168421760,168420261,168419302,168416682,168415657,168415408,168406602,168405950,168403982,168400826,168395959,168394461,168391540,168384612,168379726,168379363,168378354,168375377,168373666,168371612,168361149,168356735	168480514,168472809,168472524,168471936,168462040,168458008,168456152,168453282,168448779,168441492,168433115,168432570,168430638,168427322,168423774,168422670,168421909,168420380,168419397,168416797,168415799,168415517,168406706,168406078,168404106,168400978,168396124,168394617,168391640,168384812,168379830,168379504,168378475,168375524,168373808,168371763,168361211,168358276	Gene ID= ENSG00000181381.13 TPM= 10.51 Transcript Type= protein_coding
chr4	168832094	168928417	168832094	168928417	+	transcript4724.chr4.nnic@PALLD	transcript4724.chr4.nnic	protein_coding	168832094,168877723,168890922,168894579,168903757,168913927,168915895,168921534,168924255,168924945,168926213	168832171,168878394,168891057,168894677,168903906,168914021,168916027,168921741,168924420,168925078,168928417	Gene ID= ENSG00000129116.17 TPM= 17.22 Transcript Type= NA
chr4	168832092	168928417	168832092	168928417	+	transcript4726.chr4.nic@PALLD	transcript4726.chr4.nic	protein_coding	168832092,168890922,168894579,168898493,168903757,168913927,168915895,168921534,168924255,168924945,168926213	168832171,168891057,168894677,168898714,168903906,168914021,168916027,168921741,168924420,168925078,168928417	Gene ID= ENSG00000129116.17 TPM= 24.61 Transcript Type= NA
chr4	168832095	168928417	168832095	168928417	+	transcript4727.chr4.nnic@PALLD	transcript4727.chr4.nnic	protein_coding	168832095,168877723,168890922,168903757,168913927,168915895,168921534,168924255,168924945,168926213	168832171,168878394,168891057,168903906,168914021,168916027,168921741,168924420,168925078,168928417	Gene ID= ENSG00000129116.17 TPM= 16.05 Transcript Type= NA
chr4	168832041	168928445	168832041	168928445	+	ENST00000507735.5@PALLD	ENST00000507735.5	protein_coding	168832041,168877723,168890922,168894579,168898493,168903757,168913927,168915895,168921534,168924255,168924945,168926213	168832171,168878394,168891057,168894677,168898714,168903906,168914021,168916027,168921741,168924420,168925078,168928445	Gene ID= ENSG00000129116.17 TPM= 360 Transcript Type= protein_coding
chr4	168987595	169010276	168987595	169010276	-	transcript4732.chr4.nnic@CBR4	transcript4732.chr4.nnic	protein_coding	169009948,169007636,169006755,169002073,168998202,168987595	169010276,169007756,169006891,169002205,168998287,168990328	Gene ID= ENSG00000145439.11 TPM= 5.25 Transcript Type= NA
chr4	168987590	169010258	168987590	169010258	-	ENST00000306193.7@CBR4	ENST00000306193.7	protein_coding	169009948,169007636,169006755,169002071,168987590	169010258,169007756,169006891,169002205,168990328	Gene ID= ENSG00000145439.11 TPM= 7.59 Transcript Type= protein_coding
chr4	169094256	169271105	169094256	169271105	-	ENST00000284637.13@SH3RF1	ENST00000284637.13	protein_coding	169270859,169268820,169156404,169155480,169136318,169130046,169122100,169120819,169117523,169116269,169106847,169094256	169271105,169269307,169156679,169155575,169136620,169130156,169122266,169120989,169117782,169116630,169107205,169096687	Gene ID= ENSG00000154447.14 TPM= 24.52 Transcript Type= protein_coding
chr4	169132713	169135365	169132713	169135365	+	transcript4740.chr4.nnic@NA	transcript4740.chr4.nnic	NA	169132713	169135365	Gene ID= novel_gene_chr4_4741 TPM= 2.34 Transcript Type= NA
chr4	169620521	169723673	169620521	169723673	+	ENST00000513761.5@CLCN3	ENST00000513761.5	protein_coding	169620521,169635913,169680050,169687658,169689043,169690530,169692114,169695612,169697189,169703998,169706868,169713079,169719907	169621063,169636088,169680207,169687757,169689230,169690652,169692320,169695692,169697734,169704184,169707266,169713295,169723673	Gene ID= ENSG00000109572.13 TPM= 2.34 Transcript Type= protein_coding
chr4	169660062	169723187	169660062	169723187	+	ENST00000613795.4@CLCN3	ENST00000613795.4	protein_coding	169660062,169680050,169687658,169689043,169690530,169692114,169695612,169697189,169703998,169706868,169713079,169719907	169660448,169680207,169687757,169689230,169690652,169692320,169695692,169697734,169704184,169707266,169713295,169723187	Gene ID= ENSG00000109572.13 TPM= 3.5 Transcript Type= protein_coding
chr4	169729465	169757953	169729465	169757953	-	ENST00000393381.2@HPF1	ENST00000393381.2	protein_coding	169757830,169753676,169750536,169748744,169741957,169737660,169731704,169729465	169757953,169753835,169750725,169748842,169742107,169737747,169731876,169729709	Gene ID= ENSG00000056050.6 TPM= 39.7 Transcript Type= protein_coding
chr4	170060222	170090226	170060222	170090226	-	transcript4770.chr4.nic@AADAT	transcript4770.chr4.nic	protein_coding	170089624,170088396,170087116,170078509,170073136,170069148,170068591,170067327,170066414,170064719,170061892,170060222	170090226,170088564,170087248,170078583,170073345,170070652,170068687,170067388,170066478,170064825,170061993,170060969	Gene ID= ENSG00000109576.13 TPM= 5.84 Transcript Type= NA
chr4	170060222	170089967	170060222	170089967	-	ENST00000337664.8@AADAT	ENST00000337664.8	protein_coding	170089624,170088396,170087116,170078509,170073136,170070587,170069148,170068591,170067327,170066414,170064719,170061892,170060222	170089967,170088564,170087248,170078583,170073345,170070652,170069230,170068687,170067388,170066478,170064825,170061993,170060969	Gene ID= ENSG00000109576.13 TPM= 2.34 Transcript Type= protein_coding
chr4	173164331	173169142	173164331	173169142	-	transcript4786.chr4.nic@AC105285.1	transcript4786.chr4.nic	antisense_RNA	173168864,173167962,173166645,173166124,173164331	173169142,173168113,173166790,173166299,173165132	Gene ID= ENSG00000245213.6 TPM= 2.34 Transcript Type= NA
chr4	173168642	173323967	173168642	173323967	+	transcript4776.chr4.nic@GALNT7	transcript4776.chr4.nic	protein_coding	173168642,173247980,173292108,173295396,173295764,173297795,173302047,173303996,173313958,173317634,173318431,173321580	173168961,173248440,173292274,173295526,173295843,173297977,173302164,173304118,173314176,173317732,173318559,173323967	Gene ID= ENSG00000109586.11 TPM= 15.18 Transcript Type= NA
chr4	173168753	173323967	173168753	173323967	+	ENST00000265000.8@GALNT7	ENST00000265000.8	protein_coding	173168753,173247980,173292108,173295396,173295764,173298115,173302047,173303996,173313958,173317634,173318431,173321580	173168961,173248440,173292274,173295526,173295843,173298297,173302164,173304118,173314176,173317732,173318559,173323967	Gene ID= ENSG00000109586.11 TPM= 32.69 Transcript Type= protein_coding
chr4	173331695	173335125	173331695	173335125	-	ENST00000296503.9@HMGB2	ENST00000296503.9	protein_coding	173334272,173333500,173333069,173332821,173331695	173335125,173333669,173333214,173332995,173332238	Gene ID= ENSG00000164104.11 TPM= 23.35 Transcript Type= protein_coding
chr4	173370943	173377532	173370943	173377532	+	ENST00000296504.3@SAP30	ENST00000296504.3	protein_coding	173370943,173373390,173373939,173377205	173371497,173373515,173374037,173377532	Gene ID= ENSG00000164105.3 TPM= 30.36 Transcript Type= protein_coding
chr4	174236658	174284264	174236658	174284264	-	ENST00000393674.6@FBXO8	ENST00000393674.6	protein_coding	174283410,174262764,174259699,174241100,174238994,174236658	174284264,174263100,174259825,174241218,174239190,174237599	Gene ID= ENSG00000164117.13 TPM= 4.67 Transcript Type= protein_coding
chr4	174283905	174332293	174283905	174332293	+	ENST00000396791.7@CEP44	ENST00000396791.7	protein_coding	174283905,174297966,174299072,174302039,174303703,174304247,174308689,174309850,174310783,174316166,174316530,174317335,174318835,174331482	174284061,174298062,174299210,174302186,174303849,174304369,174308859,174310056,174310858,174316290,174316567,174318665,174319087,174332293	Gene ID= ENSG00000164118.12 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr4	174283912	174320330	174283912	174320330	+	transcript4798.chr4.nic@CEP44	transcript4798.chr4.nic	protein_coding	174283912,174297966,174299072,174302039,174303703,174304247,174308689,174309850,174310783,174316166,174316530,174317335	174284061,174298062,174299210,174302186,174303849,174304369,174308859,174310056,174310858,174316290,174316567,174320330	Gene ID= ENSG00000164118.12 TPM= 5.84 Transcript Type= NA
chr4	174283307	174320323	174283307	174320323	+	transcript4799.chr4.nnic@CEP44	transcript4799.chr4.nnic	protein_coding	174283307,174297966,174299072,174302039,174303703,174304247,174308689,174309850,174310783,174316166,174317335	174283943,174298062,174299210,174302186,174303849,174304369,174308859,174310056,174310858,174316290,174320323	Gene ID= ENSG00000164118.12 TPM= 3.5 Transcript Type= NA
chr4	174283677	174320330	174283677	174320330	+	ENST00000503780.5@CEP44	ENST00000503780.5	protein_coding	174283677,174297966,174299072,174302039,174303703,174304247,174308689,174309850,174310783,174316166,174316530,174317335	174283943,174298062,174299210,174302186,174303849,174304369,174308859,174310056,174310858,174316290,174316567,174320330	Gene ID= ENSG00000164118.12 TPM= 3.5 Transcript Type= protein_coding
chr4	174490177	174522898	174490177	174522898	-	ENST00000296522.10@HPGD	ENST00000296522.10	protein_coding	174522359,174521944,174517971,174508696,174495548,174493151,174490177	174522898,174522067,174518077,174508792,174495624,174493314,174492094	Gene ID= ENSG00000164120.13 TPM= 112.09 Transcript Type= protein_coding
chr4	174515411	174521237	174515411	174521237	+	transcript4824.chr4.nnic@NA	transcript4824.chr4.nnic	NA	174515411	174521237	Gene ID= novel_gene_chr4_4825 TPM= 10.51 Transcript Type= NA
chr4	175632934	176002332	175632934	176002332	-	ENST00000280187.11@GPM6A	ENST00000280187.11	protein_coding	176002309,175812191,175701575,175673680,175651834,175640753,175640129,175632934	176002332,175812249,175701767,175673836,175651987,175640829,175640194,175635057	Gene ID= ENSG00000150625.16 TPM= 57.21 Transcript Type= protein_coding
chr4	176318642	176320528	176318642	176320528	-	transcript4855.chr4.nnic@NA	transcript4855.chr4.nnic	NA	176318642	176320528	Gene ID= novel_gene_chr4_4856 TPM= 2.34 Transcript Type= NA
chr4	176319854	176332245	176319854	176332245	+	transcript4842.chr4.nnic@SPCS3	transcript4842.chr4.nnic	protein_coding	176319854,176322170,176324181,176327162,176328198,176331198	176320219,176322243,176324257,176327277,176331077,176332245	Gene ID= ENSG00000129128.12 TPM= 47.29 Transcript Type= NA
chr4	176319964	176332245	176319964	176332245	+	ENST00000503362.1@SPCS3	ENST00000503362.1	protein_coding	176319964,176322170,176324181,176327162,176328198	176320219,176322243,176324257,176327277,176332245	Gene ID= ENSG00000129128.12 TPM= 114.42 Transcript Type= protein_coding
chr4	177309836	177362943	177309836	177362943	+	ENST00000264596.3@NEIL3	ENST00000264596.3	protein_coding	177309836,177322459,177335688,177336108,177339783,177341476,177351380,177353308,177360503,177362289	177310109,177322580,177335822,177336321,177339857,177341642,177351549,177353728,177360677,177362943	Gene ID= ENSG00000109674.3 TPM= 1.17 Transcript Type= protein_coding
chr4	177430770	177442503	177430770	177442503	-	ENST00000264595.6@AGA	ENST00000264595.6	protein_coding	177442249,177440273,177439576,177438745,177437405,177436276,177434382,177433214,177430770	177442503,177440426,177439688,177438857,177437519,177436351,177434489,177433347,177431808	Gene ID= ENSG00000038002.8 TPM= 19.27 Transcript Type= protein_coding
chr4	177430770	177442413	177430770	177442413	-	transcript4869.chr4.nic@AGA	transcript4869.chr4.nic	protein_coding	177442249,177440273,177439576,177438745,177437405,177434382,177433214,177430770	177442413,177440426,177439688,177438857,177437519,177434481,177433347,177431808	Gene ID= ENSG00000038002.8 TPM= 2.92 Transcript Type= NA
chr4	177435077	177442409	177435077	177442409	-	transcript4871.chr4.nic@AGA	transcript4871.chr4.nic	protein_coding	177442249,177440273,177439576,177438745,177435077	177442409,177440426,177439688,177438857,177437519	Gene ID= ENSG00000038002.8 TPM= 2.34 Transcript Type= NA
chr4	177804975	177808798	177804975	177808798	-	transcript4873.chr4.nnic@NA	transcript4873.chr4.nnic	NA	177804975	177808798	Gene ID= novel_gene_chr4_4874 TPM= 2.34 Transcript Type= NA
chr4	182890104	182917469	182890104	182917469	-	transcript4879.chr4.nic@DCTD	transcript4879.chr4.nic	protein_coding	182917311,182916419,182915461,182914923,182894489,182893031,182890104	182917469,182916539,182915575,182915058,182894605,182893127,182891477	Gene ID= ENSG00000129187.14 TPM= 3.44 Transcript Type= NA
chr4	182890104	182917389	182890104	182917389	-	transcript4880.chr4.nic@DCTD	transcript4880.chr4.nic	protein_coding	182917288,182916673,182915461,182914923,182894489,182893031,182890104	182917389,182916857,182915575,182915058,182894605,182893127,182891477	Gene ID= ENSG00000129187.14 TPM= 3.44 Transcript Type= NA
chr4	182890104	182917348	182890104	182917348	-	transcript4883.chr4.nic@DCTD	transcript4883.chr4.nic	protein_coding	182916673,182915461,182914923,182894489,182893031,182890104	182917348,182915575,182915058,182894605,182893127,182891477	Gene ID= ENSG00000129187.14 TPM= 6.95 Transcript Type= NA
chr4	182890255	182917594	182890255	182917594	-	ENST00000438320.6@DCTD	ENST00000438320.6	protein_coding	182917311,182915461,182914923,182894489,182893031,182890255	182917594,182915575,182915058,182894605,182893127,182891477	Gene ID= ENSG00000129187.14 TPM= 7.01 Transcript Type= protein_coding
chr4	182890104	182917366	182890104	182917366	-	transcript4888.chr4.nic@DCTD	transcript4888.chr4.nic	protein_coding	182915461,182914923,182894489,182893031,182890104	182917366,182915058,182894605,182893127,182891477	Gene ID= ENSG00000129187.14 TPM= 4.9 Transcript Type= NA
chr4	182890104	182917379	182890104	182917379	-	ENST00000357067.7@DCTD	ENST00000357067.7	protein_coding	182917288,182915461,182914923,182894489,182893031,182890104	182917379,182915575,182915058,182894605,182893127,182891477	Gene ID= ENSG00000129187.14 TPM= 66.49 Transcript Type= protein_coding
chr4	183097017	183099199	183097017	183099199	-	ENST00000578387.1@WWC2-AS2	ENST00000578387.1	lincRNA	183097017	183099199	Gene ID= ENSG00000251359.4 TPM= 2.34 Transcript Type= lincRNA
chr4	183099293	183320777	183099293	183320777	+	ENST00000403733.7@WWC2	ENST00000403733.7	protein_coding	183099293,183193599,183207953,183208949,183240183,183245416,183248714,183249920,183253757,183259639,183260910,183264978,183265688,183265865,183268971,183271080,183280776,183282708,183284226,183285967,183289393,183312341,183315663	183099622,183193708,183208156,183209025,183240262,183245545,183248860,183249993,183253999,183259728,183261532,183265107,183265768,183265951,183269163,183271241,183280897,183282906,183284390,183286059,183289635,183312468,183320777	Gene ID= ENSG00000151718.15 TPM= 4.67 Transcript Type= protein_coding
chr4	183153647	183156931	183153647	183156931	-	transcript4919.chr4.nnic@NA	transcript4919.chr4.nnic	NA	183153647	183156931	Gene ID= novel_gene_chr4_4920 TPM= 2.34 Transcript Type= NA
chr4	183444591	183448198	183444591	183448198	+	ENST00000504169.1@CDKN2AIP	ENST00000504169.1	protein_coding	183444591,183445535,183446088	183445069,183445665,183448198	Gene ID= ENSG00000168564.5 TPM= 9.34 Transcript Type= protein_coding
chr4	183444635	183448198	183444635	183448198	+	ENST00000302350.4@CDKN2AIP	ENST00000302350.4	protein_coding	183444635,183445535,183446088	183445069,183445634,183448198	Gene ID= ENSG00000168564.5 TPM= 10.51 Transcript Type= protein_coding
chr4	183639635	183659225	183639635	183659225	-	ENST00000326397.9@RWDD4	ENST00000326397.9	protein_coding	183658929,183655881,183651218,183650984,183649451,183646488,183646351,183639635	183659225,183655961,183651327,183651131,183649568,183646537,183646353,183641468	Gene ID= ENSG00000182552.14 TPM= 5.84 Transcript Type= protein_coding
chr4	183639636	183659178	183639636	183659178	-	ENST00000327570.13@RWDD4	ENST00000327570.13	protein_coding	183658929,183655881,183651218,183650984,183649451,183646488,183639636	183659178,183655961,183651327,183651131,183649568,183646537,183641468	Gene ID= ENSG00000182552.14 TPM= 18.68 Transcript Type= protein_coding
chr4	183659267	183713592	183659267	183713592	+	ENST00000334690.10@TRAPPC11	ENST00000334690.10	protein_coding	183659267,183663847,183666257,183667060,183668003,183674713,183675164,183677458,183679353,183680120,183682732,183683975,183684145,183684305,183684696,183685084,183685271,183686618,183691316,183692960,183693589,183693917,183694604,183697503,183697679,183701697,183704979,183706807,183708407,183712600	183659447,183664071,183666426,183667130,183668117,183674812,183675237,183677554,183679486,183680267,183682825,183684054,183684223,183684359,183684841,183685145,183685403,183686748,183691471,183693147,183693737,183694038,183694723,183697568,183697835,183701808,183705070,183706940,183708574,183713592	Gene ID= ENSG00000168538.15 TPM= 38.53 Transcript Type= protein_coding
chr4	183689633	183693355	183689633	183693355	-	transcript4949.chr4.nnic@NA	transcript4949.chr4.nnic	NA	183689633	183693355	Gene ID= novel_gene_chr4_4950 TPM= 2.34 Transcript Type= NA
chr4	183795144	183798200	183795144	183798200	-	transcript4951.chr4.nnic@NA	transcript4951.chr4.nnic	NA	183795144	183798200	Gene ID= novel_gene_chr4_4952 TPM= 3.5 Transcript Type= NA
chr4	183905356	184023526	183905356	184023526	+	ENST00000308497.8@STOX2	ENST00000308497.8	protein_coding	183905356,184001325,184009158,184017089	183906956,184001477,184011423,184023526	Gene ID= ENSG00000173320.11 TPM= 2.34 Transcript Type= protein_coding
chr4	184387713	184474580	184387713	184474580	-	ENST00000393593.7@IRF2	ENST00000393593.7	protein_coding	184474379,184428978,184419469,184418532,184418167,184408158,184398915,184390703,184387713	184474580,184429070,184419568,184418708,184418213,184408275,184399079,184390749,184389066	Gene ID= ENSG00000168310.10 TPM= 50.79 Transcript Type= protein_coding
chr4	184387713	184440505	184387713	184440505	-	transcript4956.chr4.nnic@IRF2	transcript4956.chr4.nnic	protein_coding	184440367,184428978,184419469,184418532,184418167,184408158,184398915,184390703,184387713	184440505,184429070,184419568,184418708,184418213,184408275,184399079,184390749,184389066	Gene ID= ENSG00000168310.10 TPM= 6.42 Transcript Type= NA
chr4	184471927	184474049	184471927	184474049	-	transcript4962.chr4.nnic@NA	transcript4962.chr4.nnic	NA	184471927	184474049	Gene ID= novel_gene_chr4_4963 TPM= 2.34 Transcript Type= NA
chr4	184474802	184477304	184474802	184477304	+	ENST00000605834.1@AC099343.3	ENST00000605834.1	lincRNA	184474802	184477304	Gene ID= ENSG00000271646.1 TPM= 1.17 Transcript Type= lincRNA
chr4	184627696	184649475	184627696	184649475	-	ENST00000308394.8@CASP3	ENST00000308394.8	protein_coding	184649395,184648465,184638401,184635294,184632268,184631765,184631037,184627696	184649475,184648631,184638468,184635418,184632396,184631940,184631157,184629501	Gene ID= ENSG00000164305.18 TPM= 14.01 Transcript Type= protein_coding
chr4	184627696	184649509	184627696	184649509	-	ENST00000523916.5@CASP3	ENST00000523916.5	protein_coding	184649395,184638401,184635294,184632268,184631765,184631037,184627696	184649509,184638468,184635418,184632396,184631940,184631157,184629501	Gene ID= ENSG00000164305.18 TPM= 12.84 Transcript Type= protein_coding
chr4	184649613	184694952	184649613	184694952	+	ENST00000314970.10@PRIMPOL	ENST00000314970.10	protein_coding	184649613,184652023,184657082,184659340,184661774,184665917,184672173,184678232,184682248,184685409,184685576,184691499,184691666,184694522	184649908,184652100,184657320,184659437,184661903,184666064,184672460,184678394,184682336,184685498,184685684,184691581,184691712,184694952	Gene ID= ENSG00000164306.10 TPM= 22.18 Transcript Type= protein_coding
chr4	184649758	184694952	184649758	184694952	+	transcript4975.chr4.nic@PRIMPOL	transcript4975.chr4.nic	protein_coding	184649758,184652023,184657082,184659340,184661774,184665917,184672173,184678232,184685409,184685576,184691499,184691666,184694522	184649908,184652100,184657320,184659437,184661903,184666064,184672460,184678394,184685498,184685684,184691581,184691712,184694952	Gene ID= ENSG00000164306.10 TPM= 3.5 Transcript Type= NA
chr4	184649725	184694952	184649725	184694952	+	ENST00000512834.5@PRIMPOL	ENST00000512834.5	protein_coding	184649725,184652023,184657082,184659340,184661774,184665917,184672173,184678232,184682248,184685412,184685576,184691499,184691666,184694522	184649908,184652100,184657320,184659437,184661903,184666064,184672460,184678394,184682336,184685498,184685684,184691581,184691712,184694952	Gene ID= ENSG00000164306.10 TPM= 5.84 Transcript Type= protein_coding
chr4	184694618	184734133	184694618	184734133	-	ENST00000281453.9@CENPU	ENST00000281453.9	protein_coding	184734016,184730920,184728918,184724957,184717136,184716397,184712944,184710072,184702363,184702089,184700820,184697647,184694618	184734133,184730968,184729035,184725062,184717196,184716633,184713013,184710180,184702441,184702136,184700881,184697803,184695401	Gene ID= ENSG00000151725.11 TPM= 1.17 Transcript Type= protein_coding
chr4	184695002	184734130	184695002	184734130	-	ENST00000510146.5@CENPU	ENST00000510146.5	protein_coding	184734016,184730920,184728918,184724957,184717136,184716397,184712944,184710072,184702363,184702089,184697647,184695002	184734130,184730968,184729035,184725062,184717196,184716633,184713013,184710180,184702441,184702136,184697803,184695401	Gene ID= ENSG00000151725.11 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr4	184755600	184826105	184755600	184826105	-	transcript4994.chr4.nic@ACSL1	transcript4994.chr4.nic	protein_coding	184825916,184803320,184788617,184783927,184780332,184776884,184776484,184773843,184773663,184773081,184770255,184768316,184766622,184765891,184764853,184763167,184762407,184760357,184757819,184757635,184755600	184826105,184803546,184788731,184783991,184780433,184776983,184776662,184773875,184773714,184773154,184770332,184768450,184766756,184765986,184764925,184763255,184762523,184760500,184757920,184757706,184757265	Gene ID= ENSG00000151726.13 TPM= 25.31 Transcript Type= NA
chr4	184755600	184805724	184755600	184805724	-	transcript4996.chr4.nic@ACSL1	transcript4996.chr4.nic	protein_coding	184805527,184803320,184788617,184783927,184780332,184776884,184776484,184773843,184773663,184773081,184770399,184768316,184766622,184765891,184764853,184763167,184762407,184760357,184757819,184757635,184755600	184805724,184803546,184788731,184783991,184780433,184776983,184776662,184773875,184773714,184773154,184770476,184768450,184766756,184765986,184764925,184763255,184762523,184760500,184757920,184757706,184757265	Gene ID= ENSG00000151726.13 TPM= 111.66 Transcript Type= NA
chr4	184755595	184826119	184755595	184826119	-	ENST00000454703.6@ACSL1	ENST00000454703.6	protein_coding	184825916,184788617,184783927,184780332,184776884,184776484,184773843,184773663,184773081,184770399,184768316,184766622,184765891,184764853,184763167,184762407,184760357,184757819,184757635,184755595	184826119,184788731,184783991,184780433,184776983,184776662,184773875,184773714,184773154,184770476,184768450,184766756,184765986,184764925,184763255,184762523,184760500,184757920,184757706,184757265	Gene ID= ENSG00000151726.13 TPM= 21.64 Transcript Type= protein_coding
chr4	184755600	184826105	184755600	184826105	-	transcript5015.chr4.nic@ACSL1	transcript5015.chr4.nic	protein_coding	184825916,184803320,184788617,184783927,184780332,184776884,184776484,184773843,184773663,184768316,184766622,184765891,184764853,184763167,184762407,184760357,184757819,184757635,184755600	184826105,184803546,184788731,184783991,184780433,184776983,184776662,184773875,184773714,184773154,184766756,184765986,184764925,184763255,184762523,184760500,184757920,184757706,184757265	Gene ID= ENSG00000151726.13 TPM= 22.06 Transcript Type= NA
chr4	184755601	184826094	184755601	184826094	-	ENST00000281455.6@ACSL1	ENST00000281455.6	protein_coding	184825916,184803320,184788617,184783927,184780332,184776884,184776484,184773843,184773663,184773081,184770399,184768316,184766622,184765891,184764853,184763167,184762407,184760357,184757819,184757635,184755601	184826094,184803546,184788731,184783991,184780433,184776983,184776662,184773875,184773714,184773154,184770476,184768450,184766756,184765986,184764925,184763255,184762523,184760500,184757920,184757706,184757265	Gene ID= ENSG00000151726.13 TPM= 314.21 Transcript Type= protein_coding
chr4	184755600	184758876	184755600	184758876	-	ENST00000513001.5@ACSL1	ENST00000513001.5	protein_coding	184757819,184757635,184755600	184758876,184757706,184757265	Gene ID= ENSG00000151726.13 TPM= 2.31 Transcript Type= retained_intron
chr4	184800732	184804600	184800732	184804600	+	transcript5021.chr4.nnic@NA	transcript5021.chr4.nnic	NA	184800732	184804600	Gene ID= novel_gene_chr4_5022 TPM= 16.35 Transcript Type= NA
chr4	184843300	184853589	184843300	184853589	-	transcript5024.chr4.nnic@MIR3945HG	transcript5024.chr4.nnic	lincRNA	184853504,184850495,184843300	184853589,184850599,184844925	Gene ID= ENSG00000251230.5 TPM= 14.01 Transcript Type= NA
chr4	184844585	184855751	184844585	184855751	-	ENST00000511703.5@MIR3945HG	ENST00000511703.5	lincRNA	184855469,184850495,184844585	184855751,184850599,184844925	Gene ID= ENSG00000251230.5 TPM= 1.17 Transcript Type= lincRNA
chr4	184844742	184853641	184844742	184853641	-	transcript5029.chr4.nnic@MIR3945HG	transcript5029.chr4.nnic	lincRNA	184853504,184850495,184844742	184853641,184850599,184846534	Gene ID= ENSG00000251230.5 TPM= 12.84 Transcript Type= NA
chr4	185143266	185147241	185143266	185147241	+	transcript5038.chr4.nic@SLC25A4	transcript5038.chr4.nic	protein_coding	185143266,185144764,185146814	185143483,185145899,185147241	Gene ID= ENSG00000151729.10 TPM= 8.17 Transcript Type= NA
chr4	185143266	185147271	185143266	185147271	+	transcript5039.chr4.nic@SLC25A4	transcript5039.chr4.nic	protein_coding	185143266,185144764	185143483,185147271	Gene ID= ENSG00000151729.10 TPM= 25.69 Transcript Type= NA
chr4	185143278	185147241	185143278	185147241	+	ENST00000491736.1@SLC25A4	ENST00000491736.1	protein_coding	185143278,185144764,185145355,185146814	185143483,185145250,185145899,185147241	Gene ID= ENSG00000151729.10 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr4	185143241	185150382	185143241	185150382	+	ENST00000281456.10@SLC25A4	ENST00000281456.10	protein_coding	185143241,185144764,185145759,185146814	185143483,185145250,185145899,185150382	Gene ID= ENSG00000151729.10 TPM= 1.17 Transcript Type= protein_coding
chr4	185159665	185203993	185159665	185203993	-	transcript5046.chr4.nic@CFAP97	transcript5046.chr4.nic	protein_coding	185203785,185190143,185175786,185164029,185159665	185203993,185191212,185176051,185164179,185162925	Gene ID= ENSG00000164323.12 TPM= 6.42 Transcript Type= NA
chr4	185159665	185204001	185159665	185204001	-	ENST00000458385.6@CFAP97	ENST00000458385.6	protein_coding	185203898,185190143,185175786,185164029,185159665	185204001,185191212,185176051,185164179,185162925	Gene ID= ENSG00000164323.12 TPM= 3.5 Transcript Type= protein_coding
chr4	185209600	185363966	185209600	185363966	+	transcript5074.chr4.nic@SNX25	transcript5074.chr4.nic	protein_coding	185209600,185247294,185258848,185264438,185266969,185288012,185310635,185320733,185323528,185332595,185339379,185341976,185346537,185353485,185357671,185361924,185362611,185363385	185210255,185247378,185259064,185264610,185267155,185288082,185310816,185320864,185323800,185332759,185339510,185342116,185346650,185353602,185357737,185362105,185362711,185363966	Gene ID= ENSG00000109762.15 TPM= 9.18 Transcript Type= NA
chr4	185209582	185363966	185209582	185363966	+	transcript5083.chr4.nnic@SNX25	transcript5083.chr4.nnic	protein_coding	185209582,185247294,185258848,185264438,185266969,185288012,185310635,185320733,185323528,185332595,185339379,185341976,185346537,185357671,185361924,185362611,185363385	185210255,185247378,185259064,185264610,185267155,185288082,185310816,185320864,185323800,185332759,185339510,185342116,185346650,185357737,185362105,185362711,185363966	Gene ID= ENSG00000109762.15 TPM= 7.31 Transcript Type= NA
chr4	185287254	185363966	185287254	185363966	+	transcript5087.chr4.nnic@SNX25	transcript5087.chr4.nnic	protein_coding	185287254,185288012,185310635,185320733,185323528,185332595,185339379,185341976,185346537,185351445,185353485,185357671,185361924,185362611,185363385	185287556,185288082,185310816,185320864,185323800,185332759,185339510,185342116,185346650,185351609,185353602,185357737,185362105,185362711,185363966	Gene ID= ENSG00000109762.15 TPM= 21.94 Transcript Type= NA
chr4	185209598	185314344	185209598	185314344	+	transcript5106.chr4.nnic@SNX25	transcript5106.chr4.nnic	protein_coding	185209598,185247294,185258848,185264438,185266969,185288012,185310635,185312544	185210255,185247378,185259064,185264610,185267155,185288082,185310816,185314344	Gene ID= ENSG00000109762.15 TPM= 11.16 Transcript Type= NA
chr4	185210079	185363966	185210079	185363966	+	ENST00000264694.12@SNX25	ENST00000264694.12	protein_coding	185210079,185247294,185258848,185264438,185266969,185288012,185310635,185320733,185323528,185332595,185339379,185341976,185346537,185351445,185353485,185357671,185361924,185362611,185363385	185210255,185247378,185259064,185264610,185267155,185288082,185310816,185320864,185323800,185332759,185339510,185342116,185346650,185351609,185353602,185357737,185362105,185362711,185363966	Gene ID= ENSG00000109762.15 TPM= 26.61 Transcript Type= protein_coding
chr4	185399540	185425979	185399540	185425979	-	ENST00000514247.5@UFSP2	ENST00000514247.5	protein_coding	185425866,185422485,185418612,185418441,185415710,185415155,185413726,185408271,185407936,185405780,185403494,185399540	185425979,185422563,185418770,185418507,185415867,185415347,185413872,185408435,185408060,185405856,185403618,185400478	Gene ID= ENSG00000109775.10 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr4	185400289	185425985	185400289	185425985	-	ENST00000264689.10@UFSP2	ENST00000264689.10	protein_coding	185425866,185422485,185418587,185418441,185415710,185415155,185413726,185408271,185407936,185405780,185403494,185400289	185425985,185422563,185418770,185418507,185415867,185415347,185413872,185408435,185408060,185405856,185403618,185400478	Gene ID= ENSG00000109775.10 TPM= 36.2 Transcript Type= protein_coding
chr4	185402262	185425976	185402262	185425976	-	transcript5126.chr4.nic@UFSP2	transcript5126.chr4.nic	protein_coding	185425866,185422485,185418587,185418441,185415710,185415155,185413726,185408271,185407936,185405780,185403494,185402262	185425976,185422563,185418770,185418507,185415867,185415347,185413872,185408435,185408060,185405856,185403618,185402344	Gene ID= ENSG00000109775.10 TPM= 3.5 Transcript Type= NA
chr4	185407018	185425976	185407018	185425976	-	transcript5128.chr4.nic@UFSP2	transcript5128.chr4.nic	protein_coding	185425866,185422485,185418587,185418441,185415710,185415155,185413726,185407018	185425976,185422563,185418770,185418507,185415867,185415347,185413872,185408435	Gene ID= ENSG00000109775.10 TPM= 2.34 Transcript Type= NA
chr4	185501751	185535612	185501751	185535612	-	ENST00000284771.6@PDLIM3	ENST00000284771.6	protein_coding	185535342,185525020,185523362,185514703,185506522,185504475,185501751	185535612,185525171,185523446,185514890,185506652,185504586,185502483	Gene ID= ENSG00000154553.13 TPM= 9.34 Transcript Type= protein_coding
chr4	185585523	185811986	185585523	185811986	-	transcript5141.chr4.nic@SORBS2	transcript5141.chr4.nic	protein_coding	185811664,185775227,185678796,185678423,185662104,185657424,185652662,185651784,185649467,185646668,185638877,185635355,185630549,185626832,185620063,185618585,185615045,185614831,185611780,185593886,185589679,185585523	185811986,185775366,185678822,185678547,185662242,185657596,185652728,185651828,185649656,185646782,185639035,185635411,185630598,185627019,185620151,185618631,185615159,185614959,185611980,185593935,185589785,185587688	Gene ID= ENSG00000154556.17 TPM= 18.68 Transcript Type= NA
chr4	186069156	186086719	186069156	186086719	+	transcript5168.chr4.nic@TLR3	transcript5168.chr4.nic	protein_coding	186069156,186076613,186078840,186082320	186069248,186077060,186079031,186086719	Gene ID= ENSG00000164342.12 TPM= 2.34 Transcript Type= NA
chr4	186069152	186088069	186069152	186088069	+	ENST00000296795.7@TLR3	ENST00000296795.7	protein_coding	186069152,186076613,186078840,186082320,186084645	186069248,186077060,186079031,186084172,186088069	Gene ID= ENSG00000164342.12 TPM= 3.5 Transcript Type= protein_coding
chr4	186104694	186172142	186104694	186172142	+	transcript5170.chr4.nic@FAM149A	transcript5170.chr4.nic	protein_coding	186104694,186149173,186149593,186151903,186153645,186154468,186156000,186157565,186162845,186163424,186165344,186166968,186167181,186171914	186105642,186149283,186149704,186152045,186153770,186154638,186156190,186157719,186162948,186163633,186165464,186167096,186167262,186172142	Gene ID= ENSG00000109794.13 TPM= 2.34 Transcript Type= NA
chr4	186104694	186167532	186104694	186167532	+	transcript5173.chr4.nic@FAM149A	transcript5173.chr4.nic	protein_coding	186104694,186149173,186149566,186151903,186153645,186154468,186156000,186157565,186162845,186163424,186165344,186166968,186167181	186105642,186149283,186149704,186152045,186153770,186154638,186156190,186157719,186162948,186163633,186165464,186167096,186167532	Gene ID= ENSG00000109794.13 TPM= 2.34 Transcript Type= NA
chr4	186144927	186172142	186144927	186172142	+	ENST00000514153.5@FAM149A	ENST00000514153.5	protein_coding	186144927,186149173,186149593,186151903,186153645,186154468,186156000,186157565,186162845,186163424,186165344,186166968,186167181,186171914	186145112,186149283,186149704,186152045,186153770,186154638,186156190,186157719,186162948,186163633,186165464,186167096,186167262,186172142	Gene ID= ENSG00000109794.13 TPM= 2.34 Transcript Type= protein_coding
chr4	186191593	186192668	186191593	186192668	+	transcript5193.chr4.nnic@NA	transcript5193.chr4.nnic	NA	186191593	186192668	Gene ID= novel_gene_chr4_5194 TPM= 3.5 Transcript Type= NA
chr4	189940788	189963204	189940788	189963204	+	ENST00000226798.8@FRG1	ENST00000226798.8	protein_coding	189940788,189943202,189952162,189953068,189955037,189957398,189960748,189961822,189963093	189941071,189943272,189952287,189953125,189955151,189957502,189960839,189961932,189963204	Gene ID= ENSG00000109536.11 TPM= 21.02 Transcript Type= protein_coding
chr4	189940845	189963202	189940845	189963202	+	transcript5215.chr4.nic@FRG1	transcript5215.chr4.nic	protein_coding	189940845,189943202,189952162,189953068,189955037,189957398,189960748,189963093	189941071,189943272,189952287,189953125,189955151,189957502,189961932,189963202	Gene ID= ENSG00000109536.11 TPM= 2.34 Transcript Type= NA
chr4	189940845	189946326	189940845	189946326	+	transcript5216.chr4.nic@FRG1	transcript5216.chr4.nic	protein_coding	189940845,189943202	189941071,189946326	Gene ID= ENSG00000109536.11 TPM= 2.34 Transcript Type= NA
chr5	218216	256682	218216	256682	+	transcript5.chr5.nnic@SDHA	transcript5.chr5.nnic	protein_coding	218216,223482,224360,225419,225883,228185,230876,233477,235144,236428,240358,250992,251338,254393,256334	218418,223568,224521,225562,226047,228333,231000,233645,235339,236599,240476,251103,251423,254506,256682	Gene ID= ENSG00000073578.16 TPM= 98.46 Transcript Type= NA
chr5	218241	256700	218241	256700	+	ENST00000264932.10@SDHA	ENST00000264932.10	protein_coding	218241,223482,224360,225419,225883,228185,230876,233477,235144,236428,240358,250992,251338,254393,256334	218418,223568,224521,225562,226047,228333,231000,233645,235339,236599,240476,251103,251468,254506,256700	Gene ID= ENSG00000073578.16 TPM= 152.76 Transcript Type= protein_coding
chr5	218303	256682	218303	256682	+	ENST00000504309.5@SDHA	ENST00000504309.5	protein_coding	218303,223482,224360,225419,225883,228185,230876,233477,235144,236428,240358,254393,256334	218418,223568,224521,225562,226047,228333,231000,233645,235339,236599,240476,254506,256682	Gene ID= ENSG00000073578.16 TPM= 1.55 Transcript Type= protein_coding
chr5	271607	314954	271607	314954	+	transcript23.chr5.nic@PDCD6	transcript23.chr5.nic	protein_coding	271607,272711,304177,306602,311293,313701,314417	271821,272772,304221,306760,311402,313850,314954	Gene ID= ENSG00000249915.7 TPM= 3.5 Transcript Type= NA
chr5	271621	314974	271621	314974	+	ENST00000628729.2@PDCD6	ENST00000628729.2	protein_coding	271621,304177,306602,311293,314417	271821,304221,306760,311402,314974	Gene ID= ENSG00000249915.7 TPM= 3.3 Transcript Type= protein_coding
chr5	271625	314969	271625	314969	+	ENST00000513582.5@PDCD6	ENST00000513582.5	protein_coding	271625,272711,304177,311293,314417	271821,272772,306754,311402,314969	Gene ID= ENSG00000249915.7 TPM= 8.56 Transcript Type= retained_intron
chr5	271657	314969	271657	314969	+	ENST00000507528.5@PDCD6	ENST00000507528.5	protein_coding	271657,272711,304177,306602,311293,314417	271821,272772,304221,306754,311402,314969	Gene ID= ENSG00000249915.7 TPM= 14.98 Transcript Type= protein_coding
chr5	273937	275036	273937	275036	-	transcript34.chr5.nnic@NA	transcript34.chr5.nnic	NA	273937	275036	Gene ID= novel_gene_chr5_35 TPM= 2.34 Transcript Type= NA
chr5	321686	438291	321686	438291	+	transcript36.chr5.nnic@AHRR	transcript36.chr5.nnic	protein_coding	321686,343893,346557,353730,376610,413344,422729,423841,427807,432463,432806,433853	321819,343964,346848,353911,376716,413433,422858,423977,428006,432524,432947,438291	Gene ID= ENSG00000063438.16 TPM= 9.92 Transcript Type= NA
chr5	321686	438291	321686	438291	+	transcript37.chr5.nic@AHRR	transcript37.chr5.nic	protein_coding	321686,343893,353730,376610,413344,422729,423841,427807,432463,432806,433853	321819,343964,353911,376716,413433,422858,423977,428006,432524,432947,438291	Gene ID= ENSG00000063438.16 TPM= 13.43 Transcript Type= NA
chr5	415294	435058	415294	435058	+	transcript43.chr5.nnic@AHRR	transcript43.chr5.nnic	protein_coding	415294,418694,422729,423841,427807,432463,432806,433853	416106,418904,422858,423977,428006,432524,432947,435058	Gene ID= ENSG00000063438.16 TPM= 2.34 Transcript Type= NA
chr5	441498	443160	441498	443160	-	ENST00000623673.1@EXOC3-AS1	ENST00000623673.1	antisense_RNA	441498	443160	Gene ID= ENSG00000221990.4 TPM= 2.34 Transcript Type= antisense_RNA
chr5	443143	467285	443143	467285	+	transcript48.chr5.nnic@EXOC3	transcript48.chr5.nnic	protein_coding	443143,443261,446150,447533,453370,456889,457900,459359,461960,462157,464290,465111,465718,466727	443221,443290,446349,447752,454051,457006,458025,459459,462070,462307,464412,465272,465845,467285	Gene ID= ENSG00000180104.15 TPM= 39.5 Transcript Type= NA
chr5	443158	467296	443158	467296	+	ENST00000512944.5@EXOC3	ENST00000512944.5	protein_coding	443158,446150,447533,453370,456889,457900,459359,461960,462157,464290,465111,465718,466727	443290,446349,447752,454051,457006,458025,459459,462070,462307,464412,465272,465845,467296	Gene ID= ENSG00000180104.15 TPM= 95.54 Transcript Type= protein_coding
chr5	446149	467285	446149	467285	+	ENST00000315013.9@EXOC3	ENST00000315013.9	protein_coding	446149,447533,453370,456889,457900,459359,461960,462157,464290,465111,465718,466727	446349,447752,454051,457006,458025,459459,462070,462307,464412,465272,465845,467285	Gene ID= ENSG00000180104.15 TPM= 5.06 Transcript Type= protein_coding
chr5	470510	473098	470510	473098	-	ENST00000342584.3@PP7080	ENST00000342584.3	antisense_RNA	472679,470510	473098,471965	Gene ID= ENSG00000188242.4 TPM= 7.01 Transcript Type= antisense_RNA
chr5	469751	473075	469751	473075	-	transcript76.chr5.nnic@NA	transcript76.chr5.nnic	NA	469751	473075	Gene ID= novel_gene_chr5_77 TPM= 2.34 Transcript Type= NA
chr5	475526	480880	475526	480880	+	transcript94.chr5.nic@SLC9A3-AS1	transcript94.chr5.nic	processed_transcript	475526,477806	477336,480880	Gene ID= ENSG00000225138.7 TPM= 4.67 Transcript Type= NA
chr5	478123	480884	478123	480884	+	ENST00000534918.1@SLC9A3-AS1	ENST00000534918.1	processed_transcript	478123	480884	Gene ID= ENSG00000225138.7 TPM= 7.01 Transcript Type= retained_intron
chr5	612272	653553	612272	653553	+	ENST00000264935.5@CEP72	ENST00000264935.5	protein_coding	612272,618990,620069,624471,633769,635372,637517,639089,640408,644299,647805,652988	612443,619117,620261,624579,633947,635584,637818,639224,640604,644425,647916,653553	Gene ID= ENSG00000112877.7 TPM= 5.84 Transcript Type= protein_coding
chr5	659862	693395	659862	693395	-	ENST00000360578.6@TPPP	ENST00000360578.6	protein_coding	693278,677750,665970,659862	693395,678064,666123,665296	Gene ID= ENSG00000171368.11 TPM= 38.53 Transcript Type= protein_coding
chr5	673472	676617	673472	676617	+	transcript105.chr5.nnic@NA	transcript105.chr5.nnic	NA	673472	676617	Gene ID= novel_gene_chr5_106 TPM= 2.34 Transcript Type= NA
chr5	693538	694823	693538	694823	+	transcript117.chr5.nnic@NA	transcript117.chr5.nnic	NA	693538,694081	693722,694823	Gene ID= novel_gene_chr5_118 TPM= 2.34 Transcript Type= NA
chr5	863741	892832	863741	892832	-	transcript123.chr5.nic@BRD9	transcript123.chr5.nic	protein_coding	892606,891640,891155,889587,889021,887361,886592,883938,881107,879794,878355,876101,871526,870473,865414,863741	892832,891854,891287,889766,889165,887471,886707,884070,881182,879889,878487,876212,871564,870575,865581,864568	Gene ID= ENSG00000028310.17 TPM= 6.81 Transcript Type= NA
chr5	863741	892832	863741	892832	-	transcript124.chr5.nic@BRD9	transcript124.chr5.nic	protein_coding	892606,891640,891155,889587,889021,887361,886592,883938,881107,879794,878355,876101,871526,870473,865414,863741	892832,891854,891287,889647,889165,887471,886767,884070,881182,879889,878487,876212,871564,870575,865581,864568	Gene ID= ENSG00000028310.17 TPM= 4.47 Transcript Type= NA
chr5	863741	892832	863741	892832	-	transcript127.chr5.nic@BRD9	transcript127.chr5.nic	protein_coding	892606,891640,889587,889021,887361,886592,883938,881107,879794,878355,876101,871526,870473,865414,863741	892832,891854,891287,889165,887471,886767,884070,881182,879889,878487,876212,871564,870575,865581,864568	Gene ID= ENSG00000028310.17 TPM= 2.72 Transcript Type= NA
chr5	892643	918120	892643	918120	+	ENST00000166345.7@TRIP13	ENST00000166345.7	protein_coding	892643,894787,896665,900494,901341,904148,907130,907988,908355,911843,914465,915904,917008	893090,894952,896794,900549,901431,904220,907193,908074,908461,911996,914577,915973,918120	Gene ID= ENSG00000071539.13 TPM= 1.17 Transcript Type= protein_coding
chr5	1005039	1006623	1005039	1006623	+	ENST00000606540.1@AC116351.2	ENST00000606540.1	lincRNA	1005039	1006623	Gene ID= ENSG00000272347.1 TPM= 2.34 Transcript Type= lincRNA
chr5	1008801	1038682	1008801	1038682	+	transcript141.chr5.nic@NKD2	transcript141.chr5.nic	protein_coding	1008801,1009179,1009481,1032152,1033372,1034235,1034756,1035389,1036110,1037805	1009082,1009214,1009560,1032212,1033499,1034330,1034903,1035473,1036384,1038682	Gene ID= ENSG00000145506.13 TPM= 12.84 Transcript Type= NA
chr5	1008801	1038682	1008801	1038682	+	transcript146.chr5.nic@NKD2	transcript146.chr5.nic	protein_coding	1008801,1009179,1009481,1032152,1033372,1034756,1035389,1037805	1009082,1009214,1009560,1032212,1034330,1034903,1036384,1038682	Gene ID= ENSG00000145506.13 TPM= 8.17 Transcript Type= NA
chr5	1040044	1040623	1040044	1040623	+	transcript149.chr5.nnic@NA	transcript149.chr5.nnic	NA	1040044	1040623	Gene ID= novel_gene_chr5_150 TPM= 3.5 Transcript Type= NA
chr5	1050376	1112035	1050376	1112035	-	ENST00000264930.9@SLC12A7	ENST00000264930.9	protein_coding	1111868,1094154,1093533,1088982,1088306,1086903,1085232,1083745,1081577,1079398,1078701,1077833,1076694,1076138,1075371,1074567,1073633,1065283,1064083,1063844,1060344,1057471,1053349,1050376	1112035,1094248,1093655,1089128,1088360,1087033,1085473,1083956,1081744,1079496,1078758,1078007,1076812,1076236,1075490,1074671,1073801,1065478,1064252,1063975,1060451,1057649,1053482,1052451	Gene ID= ENSG00000113504.20 TPM= 91.07 Transcript Type= protein_coding
chr5	1065650	1068470	1065650	1068470	+	transcript158.chr5.nnic@NA	transcript158.chr5.nnic	NA	1065650	1068470	Gene ID= novel_gene_chr5_159 TPM= 7.01 Transcript Type= NA
chr5	1317744	1345099	1317744	1345099	-	ENST00000320895.9@CLPTM1L	ENST00000320895.9	protein_coding	1344680,1344351,1341671,1338860,1337904,1335057,1334289,1331799,1330280,1325751,1324763,1323787,1322877,1321764,1321635,1320616,1317744	1345099,1344451,1341860,1339005,1337982,1335174,1334383,1331883,1330383,1325816,1324813,1323869,1322911,1321819,1321679,1320731,1318453	Gene ID= ENSG00000049656.13 TPM= 262.26 Transcript Type= protein_coding
chr5	1345203	1350800	1345203	1350800	+	transcript202.chr5.nnic@NA	transcript202.chr5.nnic	NA	1345203	1350800	Gene ID= novel_gene_chr5_203 TPM= 26.85 Transcript Type= NA
chr5	1461429	1524202	1461429	1524202	-	transcript224.chr5.nic@LPCAT1	transcript224.chr5.nic	protein_coding	1523710,1521347,1501461,1494700,1489746,1488391,1483428,1480942,1479621,1477404,1474560,1473957,1470826,1466749,1461429	1524202,1521480,1501603,1494914,1489858,1488451,1483486,1480976,1479675,1477486,1474685,1474110,1470924,1466890,1463835	Gene ID= ENSG00000153395.9 TPM= 92.47 Transcript Type= NA
chr5	1461423	1523977	1461423	1523977	-	ENST00000283415.3@LPCAT1	ENST00000283415.3	protein_coding	1523710,1501461,1494700,1489746,1488391,1483428,1480942,1479621,1477404,1474560,1473957,1470826,1466749,1461423	1523977,1501603,1494914,1489858,1488451,1483486,1480976,1479675,1477486,1474685,1474110,1470924,1466890,1463835	Gene ID= ENSG00000153395.9 TPM= 1744.71 Transcript Type= protein_coding
chr5	1461427	1466356	1461427	1466356	-	transcript265.chr5.nnic@NA	transcript265.chr5.nnic	NA	1461427	1466356	Gene ID= novel_gene_chr5_266 TPM= 34.83 Transcript Type= NA
chr5	1501291	1504730	1501291	1504730	+	transcript261.chr5.nnic@NA	transcript261.chr5.nnic	NA	1501291	1504730	Gene ID= novel_gene_chr5_262 TPM= 11.68 Transcript Type= NA
chr5	1512007	1518393	1512007	1518393	+	transcript259.chr5.nnic@NA	transcript259.chr5.nnic	NA	1512007	1518393	Gene ID= novel_gene_chr5_260 TPM= 15.18 Transcript Type= NA
chr5	1518992	1520900	1518992	1520900	+	transcript263.chr5.nnic@NA	transcript263.chr5.nnic	NA	1518992	1520900	Gene ID= novel_gene_chr5_264 TPM= 58.38 Transcript Type= NA
chr5	1571957	1594692	1571957	1594692	-	transcript283.chr5.nnic@SDHAP3	transcript283.chr5.nnic	transcribed_unprocessed_pseudogene	1594395,1593113,1589247,1584984,1579277,1576179,1574182,1571957	1594692,1593284,1589365,1585133,1579484,1576309,1574295,1572286	Gene ID= ENSG00000185986.11 TPM= 2.34 Transcript Type= NA
chr5	1571957	1594693	1571957	1594693	-	transcript286.chr5.nnic@SDHAP3	transcript286.chr5.nnic	transcribed_unprocessed_pseudogene	1594395,1593113,1589247,1584984,1579277,1576179,1574182,1571957	1594693,1593284,1589365,1585133,1581695,1576309,1574295,1572286	Gene ID= ENSG00000185986.11 TPM= 5.84 Transcript Type= NA
chr5	1571957	1594500	1571957	1594500	-	transcript291.chr5.nnic@SDHAP3	transcript291.chr5.nnic	transcribed_unprocessed_pseudogene	1594395,1593113,1589247,1584984,1579277,1576179,1571957	1594500,1593284,1589365,1585133,1579484,1576309,1574295	Gene ID= ENSG00000185986.11 TPM= 4.67 Transcript Type= NA
chr5	1567482	1583746	1567482	1583746	-	transcript296.chr5.nnic@SDHAP3	transcript296.chr5.nnic	transcribed_unprocessed_pseudogene	1579277,1576179,1574182,1567482	1583746,1576309,1574295,1568998	Gene ID= ENSG00000185986.11 TPM= 2.92 Transcript Type= NA
chr5	1571957	1583746	1571957	1583746	-	transcript297.chr5.nnic@SDHAP3	transcript297.chr5.nnic	transcribed_unprocessed_pseudogene	1579277,1576179,1574182,1571957	1583746,1576309,1574295,1572286	Gene ID= ENSG00000185986.11 TPM= 4.09 Transcript Type= NA
chr5	1570118	1571821	1570118	1571821	+	transcript310.chr5.nnic@NA	transcript310.chr5.nnic	NA	1570118,1570182	1570149,1571821	Gene ID= novel_gene_chr5_311 TPM= 29.19 Transcript Type= NA
chr5	1591329	1593685	1591329	1593685	+	transcript315.chr5.nnic@NA	transcript315.chr5.nnic	NA	1591329	1593685	Gene ID= novel_gene_chr5_316 TPM= 3.5 Transcript Type= NA
chr5	1628522	1634015	1628522	1634015	-	transcript304.chr5.nnic@AC026412.1	transcript304.chr5.nnic	transcribed_unprocessed_pseudogene	1633808,1632845,1628522	1634015,1632906,1629630	Gene ID= ENSG00000188002.10 TPM= 2.34 Transcript Type= NA
chr5	1798387	1799895	1798387	1799895	-	ENST00000508987.1@MRPL36	ENST00000508987.1	protein_coding	1799771,1798387	1799895,1798947	Gene ID= ENSG00000171421.12 TPM= 5.45 Transcript Type= protein_coding
chr5	1798387	1799837	1798387	1799837	-	transcript326.chr5.nnic@MRPL36	transcript326.chr5.nnic	protein_coding	1799781,1798387	1799837,1798947	Gene ID= ENSG00000171421.12 TPM= 8.96 Transcript Type= NA
chr5	1798386	1799839	1798386	1799839	-	ENST00000505059.6@MRPL36	ENST00000505059.6	protein_coding	1799792,1798386	1799839,1798947	Gene ID= ENSG00000171421.12 TPM= 8.96 Transcript Type= protein_coding
chr5	2746165	2751707	2746165	2751707	-	transcript332.chr5.nnic@IRX2	transcript332.chr5.nnic	protein_coding	2751165,2749382,2748345,2747541,2746165	2751707,2749787,2749052,2747616,2746718	Gene ID= ENSG00000170561.12 TPM= 5.25 Transcript Type= NA
chr5	2746746	2751707	2746746	2751707	-	transcript346.chr5.nic@IRX2	transcript346.chr5.nic	protein_coding	2751165,2749382,2746746	2751707,2749787,2749052	Gene ID= ENSG00000170561.12 TPM= 7.59 Transcript Type= NA
chr5	2745845	2751662	2745845	2751662	-	ENST00000382611.10@IRX2	ENST00000382611.10	protein_coding	2751165,2749382,2748345,2747541,2745845	2751662,2749787,2749052,2747616,2746786	Gene ID= ENSG00000170561.12 TPM= 6.42 Transcript Type= protein_coding
chr5	2746766	2751655	2746766	2751655	-	ENST00000302057.5@IRX2	ENST00000302057.5	protein_coding	2751165,2749382,2748345,2746766	2751655,2749787,2749052,2747616	Gene ID= ENSG00000170561.12 TPM= 20.43 Transcript Type= protein_coding
chr5	2756308	2758574	2756308	2758574	+	transcript351.chr5.nnic@NA	transcript351.chr5.nnic	NA	2756308	2758574	Gene ID= novel_gene_chr5_352 TPM= 11.68 Transcript Type= NA
chr5	3596054	3601403	3596054	3601403	+	ENST00000302006.3@IRX1	ENST00000302006.3	protein_coding	3596054,3599225,3600609,3600983	3596381,3600260,3600681,3601403	Gene ID= ENSG00000170549.3 TPM= 4.67 Transcript Type= protein_coding
chr5	5422694	5490234	5422694	5490234	+	ENST00000296564.8@ICE1	ENST00000296564.8	protein_coding	5422694,5436418,5437080,5439895,5441112,5443168,5444289,5447427,5447721,5447841,5454552,5457332,5460436,5466334,5468828,5473558,5475973,5486721,5489149	5422999,5436476,5437114,5439913,5441223,5443244,5444326,5447509,5447760,5447897,5454638,5457741,5465226,5466502,5468988,5473748,5476079,5486819,5490234	Gene ID= ENSG00000164151.11 TPM= 11.68 Transcript Type= protein_coding
chr5	6371881	6378594	6371881	6378594	-	ENST00000255764.3@MED10	ENST00000255764.3	protein_coding	6378362,6377166,6374324,6371881	6378594,6377249,6374426,6372601	Gene ID= ENSG00000133398.3 TPM= 56.04 Transcript Type= protein_coding
chr5	6371881	6378579	6371881	6378579	-	transcript365.chr5.nic@MED10	transcript365.chr5.nic	protein_coding	6378362,6374324,6371881	6378579,6377249,6372601	Gene ID= ENSG00000133398.3 TPM= 3.5 Transcript Type= NA
chr5	6371925	6376631	6371925	6376631	-	transcript366.chr5.nnic@NA	transcript366.chr5.nnic	NA	6371925	6376631	Gene ID= novel_gene_chr5_367 TPM= 3.5 Transcript Type= NA
chr5	6599239	6633291	6599239	6633291	-	ENST00000264670.10@NSUN2	ENST00000264670.10	protein_coding	6632884,6632599,6631873,6625564,6623214,6622016,6620106,6617950,6616727,6611725,6610955,6609826,6607200,6606820,6605273,6604605,6604138,6602461,6599239	6633291,6632756,6631977,6625669,6623285,6622100,6620298,6618024,6616857,6611798,6611085,6609922,6607384,6606912,6605408,6604685,6604276,6602500,6600232	Gene ID= ENSG00000037474.14 TPM= 101.58 Transcript Type= protein_coding
chr5	6633343	6674386	6633343	6674386	+	ENST00000274192.6@SRD5A1	ENST00000274192.6	protein_coding	6633343,6651842,6656078,6662816,6668202	6633869,6652008,6656179,6662966,6674386	Gene ID= ENSG00000145545.11 TPM= 2.34 Transcript Type= protein_coding
chr5	6713007	6757048	6713007	6757048	+	ENST00000230859.7@PAPD7	ENST00000230859.7	protein_coding	6713007,6737510,6738683,6739732,6742490,6743712,6746214,6748464,6749557,6750331,6751039,6752873,6754751	6714699,6737633,6738729,6739852,6742597,6743840,6746427,6748590,6749657,6750503,6751197,6753037,6757048	Gene ID= ENSG00000112941.13 TPM= 28.02 Transcript Type= protein_coding
chr5	7859159	7869055	7859159	7869055	-	transcript388.chr5.nic@FASTKD3	transcript388.chr5.nic	protein_coding	7868979,7866646,7865898,7862823,7861583,7861149,7859159	7869055,7868107,7865983,7862997,7861652,7861263,7859539	Gene ID= ENSG00000124279.11 TPM= 5.84 Transcript Type= NA
chr5	7859159	7869002	7859159	7869002	-	ENST00000264669.9@FASTKD3	ENST00000264669.9	protein_coding	7868979,7866646,7865898,7862823,7861583,7861149,7859159	7869002,7868196,7865983,7862997,7861652,7861263,7859539	Gene ID= ENSG00000124279.11 TPM= 10.51 Transcript Type= protein_coding
chr5	7869209	7900615	7869209	7900615	+	transcript399.chr5.nic@MTRR	transcript399.chr5.nic	protein_coding	7869209,7873373,7875258,7877944,7883155,7885701,7886615,7889095,7890261,7891372,7892727,7895734,7896864,7897065,7899914	7870923,7873526,7875375,7878322,7883277,7885854,7886703,7889275,7890412,7891414,7892913,7895852,7896956,7897247,7900615	Gene ID= ENSG00000124275.14 TPM= 2.34 Transcript Type= NA
chr5	7869140	7901124	7869140	7901124	+	transcript402.chr5.nic@MTRR	transcript402.chr5.nic	protein_coding	7869140,7870770,7875258,7877944,7883155,7885701,7886615,7889095,7891372,7892727,7895734,7896864,7897065,7899914	7869215,7870923,7875375,7878322,7883277,7885854,7886703,7889275,7891414,7892913,7895852,7896956,7897247,7901124	Gene ID= ENSG00000124275.14 TPM= 8.56 Transcript Type= NA
chr5	7869148	7901124	7869148	7901124	+	ENST00000511461.5@MTRR	ENST00000511461.5	protein_coding	7869148,7870770,7875258,7877944,7883155,7885701,7886615,7889095,7891372,7892727,7895734,7896864,7897065,7899914	7869189,7870923,7875375,7878322,7883277,7885854,7886703,7889275,7891414,7892913,7895852,7896956,7897247,7901124	Gene ID= ENSG00000124275.14 TPM= 8.56 Transcript Type= nonsense_mediated_decay
chr5	7869189	7901124	7869189	7901124	+	ENST00000440940.6@MTRR	ENST00000440940.6	protein_coding	7869189,7870770,7873373,7875258,7877944,7883155,7885701,7886615,7889095,7891372,7892727,7895734,7896864,7897065,7899914	7869215,7870923,7873526,7875375,7878322,7883277,7885854,7886703,7889275,7891414,7892913,7895852,7896956,7897247,7901124	Gene ID= ENSG00000124275.14 TPM= 35.41 Transcript Type= protein_coding
chr5	8457493	8460663	8457493	8460663	+	ENST00000502001.2@MIR4458HG	ENST00000502001.2	lincRNA	8457493,8459933	8457766,8460663	Gene ID= ENSG00000247516.6 TPM= 10.51 Transcript Type= lincRNA
chr5	8457691	8463095	8457691	8463095	+	ENST00000606459.1@MIR4458HG	ENST00000606459.1	lincRNA	8457691,8459933	8457766,8463095	Gene ID= ENSG00000247516.6 TPM= 11.68 Transcript Type= lincRNA
chr5	9035026	9546075	9035026	9546075	-	ENST00000382496.9@SEMA5A	ENST00000382496.9	protein_coding	9545584,9437756,9379823,9337713,9318372,9237828,9226869,9224674,9201955,9197168,9190267,9154488,9136504,9122656,9118998,9108140,9066421,9062887,9054087,9051873,9050410,9044373,9035026	9546075,9437852,9380023,9337812,9318417,9237890,9226967,9224887,9202240,9197303,9190471,9154695,9136621,9122837,9119141,9108287,9066646,9063105,9054257,9052028,9050457,9044584,9043016	Gene ID= ENSG00000112902.11 TPM= 11.68 Transcript Type= protein_coding
chr5	9546200	9550609	9546200	9550609	+	ENST00000508179.1@SNHG18	ENST00000508179.1	lincRNA	9546200,9548990,9549302	9546530,9549149,9550609	Gene ID= ENSG00000250786.1 TPM= 4.67 Transcript Type= lincRNA
chr5	10249921	10266412	10249921	10266412	+	ENST00000280326.8@CCT5	ENST00000280326.8	protein_coding	10249921,10254145,10254674,10255955,10258111,10258386,10260792,10261560,10262481,10263134,10264656	10250445,10254205,10254838,10256153,10258303,10258535,10260911,10261745,10262618,10263314,10266412	Gene ID= ENSG00000150753.11 TPM= 17.9 Transcript Type= protein_coding
chr5	10279277	10308026	10279277	10308026	-	ENST00000296658.3@CMBL	ENST00000296658.3	protein_coding	10307625,10290548,10288422,10286354,10282197,10279277	10308026,10290781,10288529,10286496,10282288,10280632	Gene ID= ENSG00000164237.8 TPM= 14.01 Transcript Type= protein_coding
chr5	10353891	10433961	10353891	10433961	+	transcript450.chr5.nic@MARCH6	transcript450.chr5.nic	protein_coding	10353891,10377798,10378759,10381800,10386994,10390332,10391542,10394082,10394753,10397293,10400784,10402059,10402384,10402533,10403407,10405558,10407102,10410139,10411333,10414433,10415488,10417270,10423735,10426390,10429893,10433594	10353917,10377894,10378832,10381943,10387066,10390500,10391731,10394143,10394785,10397344,10401486,10402139,10402452,10402607,10403541,10405677,10407202,10410276,10411537,10414502,10415669,10417404,10423824,10426522,10430028,10433961	Gene ID= ENSG00000145495.15 TPM= 3.5 Transcript Type= NA
chr5	10353671	10433961	10353671	10433961	+	transcript452.chr5.nnic@MARCH6	transcript452.chr5.nnic	protein_coding	10353671,10377798,10378759,10381800,10386994,10390332,10391542,10394082,10394753,10397293,10400784,10402384,10402533,10403407,10405558,10407102,10410139,10411333,10413275,10414433,10415488,10417270,10423735,10426390,10429893,10433594	10353917,10377894,10378832,10381943,10387066,10390500,10391731,10394143,10394785,10397344,10402139,10402452,10402607,10403541,10405677,10407202,10410276,10411537,10413450,10414502,10415669,10417404,10423824,10426522,10430028,10433961	Gene ID= ENSG00000145495.15 TPM= 2.34 Transcript Type= NA
chr5	10353671	10433961	10353671	10433961	+	transcript456.chr5.nnic@MARCH6	transcript456.chr5.nnic	protein_coding	10353671,10377798,10378759,10381800,10386994,10391542,10394082,10394753,10397293,10400784,10402384,10402533,10403407,10405558,10407102,10410139,10411333,10414433,10415488,10417270,10423735,10426390,10429893,10433594	10353917,10377894,10378832,10381943,10387066,10391731,10394143,10394785,10397344,10402139,10402452,10402607,10403541,10405677,10407202,10410276,10411537,10414502,10415669,10417404,10423824,10426522,10430028,10433961	Gene ID= ENSG00000145495.15 TPM= 3.5 Transcript Type= NA
chr5	10353715	10434285	10353715	10434285	+	ENST00000511802.5@MARCH6	ENST00000511802.5	protein_coding	10353715,10377798,10378759,10381800,10386994,10390332,10391542,10394082,10394753,10397293,10400784,10402384,10402533,10403407,10405558,10407102,10410139,10411333,10414433,10415488,10417270,10423735,10426390,10429893,10433594	10353917,10377894,10378832,10381943,10387066,10390500,10391731,10394143,10394785,10397344,10402139,10402452,10402607,10403541,10405677,10407202,10410276,10411537,10414502,10415669,10417404,10423824,10426522,10430028,10434285	Gene ID= ENSG00000145495.15 TPM= 3.5 Transcript Type= retained_intron
chr5	10435924	10437847	10435924	10437847	+	transcript462.chr5.nnic@NA	transcript462.chr5.nnic	NA	10435924	10437847	Gene ID= novel_gene_chr5_463 TPM= 4.67 Transcript Type= NA
chr5	10622810	10626833	10622810	10626833	-	transcript466.chr5.nnic@NA	transcript466.chr5.nnic	NA	10622810	10626833	Gene ID= novel_gene_chr5_467 TPM= 2.34 Transcript Type= NA
chr5	10679230	10761272	10679230	10761272	-	ENST00000230895.10@DAP	ENST00000230895.10	protein_coding	10761014,10748175,10683529,10679230	10761272,10748271,10683571,10681169	Gene ID= ENSG00000112977.15 TPM= 398.15 Transcript Type= protein_coding
chr5	14143249	14144424	14143249	14144424	-	transcript487.chr5.nnic@NA	transcript487.chr5.nnic	NA	14143249	14144424	Gene ID= novel_gene_chr5_488 TPM= 2.34 Transcript Type= NA
chr5	14423926	14426332	14423926	14426332	-	transcript483.chr5.nnic@NA	transcript483.chr5.nnic	NA	14423926	14426332	Gene ID= novel_gene_chr5_484 TPM= 7.01 Transcript Type= NA
chr5	14458043	14463083	14458043	14463083	-	transcript485.chr5.nnic@NA	transcript485.chr5.nnic	NA	14458043	14463083	Gene ID= novel_gene_chr5_486 TPM= 3.5 Transcript Type= NA
chr5	14581773	14615565	14581773	14615565	+	transcript492.chr5.nic@FAM105A	transcript492.chr5.nic	protein_coding	14581773,14600965,14601213,14601351,14602183,14607330,14608748,14610141,14614531	14581958,14601124,14601244,14601442,14602332,14607458,14609017,14610441,14615565	Gene ID= ENSG00000145569.5 TPM= 7.59 Transcript Type= NA
chr5	14581775	14612720	14581775	14612720	+	ENST00000274217.3@FAM105A	ENST00000274217.3	protein_coding	14581775,14600965,14601213,14601351,14602183,14607330,14608748,14610141	14581958,14601124,14601244,14601442,14602332,14607458,14609017,14612720	Gene ID= ENSG00000145569.5 TPM= 146.53 Transcript Type= protein_coding
chr5	14664725	14693419	14664725	14693419	+	transcript524.chr5.nnic@OTULIN	transcript524.chr5.nnic	protein_coding	14664725,14673642,14678681,14681464,14687521,14692854	14664977,14673718,14678775,14681607,14687646,14693419	Gene ID= ENSG00000154124.4 TPM= 2.34 Transcript Type= NA
chr5	14664691	14694521	14664691	14694521	+	transcript527.chr5.nic@OTULIN	transcript527.chr5.nic	protein_coding	14664691,14678681,14681464,14687521,14690039,14692854	14664977,14678775,14681607,14687646,14690308,14694521	Gene ID= ENSG00000154124.4 TPM= 3.5 Transcript Type= NA
chr5	14709819	14871900	14709819	14871900	-	transcript509.chr5.nnic@ANKH	transcript509.chr5.nnic	protein_coding	14871352,14848776,14768975,14758480,14755861,14751069,14749172,14745870,14741827,14716706,14713544,14712874,14709819	14871900,14848863,14769191,14758598,14755944,14751239,14749306,14745962,14741922,14716835,14713667,14712973,14711310	Gene ID= ENSG00000154122.12 TPM= 9.92 Transcript Type= NA
chr5	14709819	14871829	14709819	14871829	-	transcript510.chr5.nnic@ANKH	transcript510.chr5.nnic	protein_coding	14871759,14871352,14768975,14758480,14755861,14751069,14749172,14745870,14741827,14716706,14713544,14712874,14709819	14871829,14871724,14769191,14758598,14755944,14751239,14749306,14745962,14741922,14716835,14713667,14712973,14711310	Gene ID= ENSG00000154122.12 TPM= 22.77 Transcript Type= NA
chr5	14704804	14871778	14704804	14871778	-	ENST00000284268.6@ANKH	ENST00000284268.6	protein_coding	14871352,14768975,14758480,14755861,14751069,14749172,14745870,14741827,14716706,14713544,14712874,14704804	14871778,14769191,14758598,14755944,14751239,14749306,14745962,14741922,14716835,14713667,14712973,14711310	Gene ID= ENSG00000154122.12 TPM= 10.51 Transcript Type= protein_coding
chr5	15927888	15939795	15927888	15939795	+	ENST00000329673.8@FBXL7	ENST00000329673.8	protein_coding	15927888,15936450	15928501,15939795	Gene ID= ENSG00000183580.9 TPM= 12.84 Transcript Type= protein_coding
chr5	16451519	16465792	16451519	16465792	-	ENST00000308683.2@ZNF622	ENST00000308683.2	protein_coding	16465041,16463482,16463108,16458517,16453013,16451519	16465792,16463742,16463270,16458629,16453156,16451784	Gene ID= ENSG00000173545.4 TPM= 68.89 Transcript Type= protein_coding
chr5	16473053	16508998	16473053	16508998	-	ENST00000399793.6@RETREG1	ENST00000399793.6	protein_coding	16508578,16483346,16481009,16478850,16478034,16477662,16473053	16508998,16483472,16481093,16478987,16478098,16477788,16475234	Gene ID= ENSG00000154153.13 TPM= 2.92 Transcript Type= protein_coding
chr5	16473054	16617058	16473054	16617058	-	ENST00000306320.9@RETREG1	ENST00000306320.9	protein_coding	16616652,16571996,16565763,16483346,16481009,16478850,16478034,16477662,16473054	16617058,16572102,16565793,16483472,16481093,16478987,16478098,16477788,16475234	Gene ID= ENSG00000154153.13 TPM= 6.42 Transcript Type= protein_coding
chr5	16702977	16936297	16702977	16936297	-	transcript552.chr5.nic@MYO10	transcript552.chr5.nic	protein_coding	16935788,16877609,16818009,16794646,16783335,16781705,16780728,16780524,16779545,16769074,16766080,16764250,16763655,16763481,16762545,16762045,16761464,16758118,16754828,16711121,16710908,16704579,16702977	16936297,16877707,16818167,16794833,16783469,16781829,16780741,16780608,16779648,16769203,16766198,16764396,16763755,16763547,16762637,16762113,16761546,16758226,16754908,16711245,16711022,16704685,16703158	Gene ID= ENSG00000145555.14 TPM= 23.94 Transcript Type= NA
chr5	16781080	16936267	16781080	16936267	-	transcript557.chr5.nic@MYO10	transcript557.chr5.nic	protein_coding	16935788,16877609,16818009,16794646,16783335,16781080	16936267,16877707,16818167,16794833,16783469,16781829	Gene ID= ENSG00000145555.14 TPM= 2.92 Transcript Type= NA
chr5	16781080	16936263	16781080	16936263	-	transcript558.chr5.nic@MYO10	transcript558.chr5.nic	protein_coding	16935788,16877609,16818009,16794646,16781080	16936263,16877707,16818167,16794833,16783469	Gene ID= ENSG00000145555.14 TPM= 2.34 Transcript Type= NA
chr5	16665286	16936263	16665286	16936263	-	ENST00000513610.5@MYO10	ENST00000513610.5	protein_coding	16935788,16877609,16818009,16794646,16783335,16781705,16780728,16780524,16779545,16769074,16766080,16764250,16763655,16763481,16762545,16762045,16761464,16758118,16754828,16711121,16710908,16704579,16702925,16702543,16700963,16699450,16694371,16689824,16685738,16683880,16681871,16681309,16679947,16676031,16674853,16673682,16672689,16671422,16670526,16668277,16665286	16936263,16877707,16818167,16794833,16783469,16781829,16780741,16780608,16779648,16769203,16766198,16764396,16763755,16763547,16762637,16762113,16761546,16758226,16754908,16711245,16711022,16704685,16703158,16702588,16701838,16699573,16694614,16689919,16685831,16683935,16682013,16681503,16680104,16676154,16675150,16673889,16672825,16671542,16670978,16668468,16666793	Gene ID= ENSG00000145555.14 TPM= 92.24 Transcript Type= protein_coding
chr5	16814517	16936259	16814517	16936259	-	ENST00000507288.1@MYO10	ENST00000507288.1	protein_coding	16935788,16877609,16818009,16814517	16936259,16877707,16818167,16815463	Gene ID= ENSG00000145555.14 TPM= 3.5 Transcript Type= protein_coding
chr5	16670399	16672306	16670399	16672306	+	transcript562.chr5.nnic@NA	transcript562.chr5.nnic	NA	16670399	16672306	Gene ID= novel_gene_chr5_563 TPM= 2.34 Transcript Type= NA
chr5	17217560	17276834	17217560	17276834	+	ENST00000322611.3@BASP1	ENST00000322611.3	protein_coding	17217560,17275208	17217810,17276834	Gene ID= ENSG00000176788.8 TPM= 26.85 Transcript Type= protein_coding
chr5	17221367	17231517	17221367	17231517	-	transcript570.chr5.nnic@NA	transcript570.chr5.nnic	NA	17221367	17231517	Gene ID= novel_gene_chr5_571 TPM= 11.68 Transcript Type= NA
chr5	21459513	21474439	21459513	21474439	+	ENST00000508973.5@GUSBP1	ENST00000508973.5	transcribed_unprocessed_pseudogene	21459513,21459678,21461783,21473357	21459584,21459743,21461866,21474439	Gene ID= ENSG00000183666.16 TPM= 1.17 Transcript Type= processed_transcript
chr5	25101018	25190657	25101018	25190657	-	ENST00000641261.1@LINC02228	ENST00000641261.1	lincRNA	25190447,25167162,25162230,25136342,25101018	25190657,25167191,25162269,25136445,25103121	Gene ID= ENSG00000251273.2 TPM= 2.34 Transcript Type= lincRNA
chr5	31401134	31532109	31401134	31532109	-	ENST00000513349.5@DROSHA	ENST00000513349.5	protein_coding	31531990,31531450,31530798,31529040,31526079,31521123,31514988,31511035,31508621,31504555,31495286,31493207,31486491,31484881,31483554,31472063,31467939,31466182,31464236,31451533,31449281,31448547,31437239,31435765,31431576,31429475,31424427,31422787,31421272,31410746,31409250,31409056,31406853,31405677,31401134	31532109,31531525,31530924,31529105,31526912,31521215,31515219,31511176,31508775,31504635,31495372,31493293,31486562,31484962,31483628,31472232,31468063,31466281,31464343,31451640,31449419,31448607,31437298,31435864,31431678,31429545,31424471,31422944,31421377,31410887,31409332,31409159,31406945,31405723,31401562	Gene ID= ENSG00000113360.16 TPM= 3.5 Transcript Type= protein_coding
chr5	31532266	31555058	31532266	31555058	+	ENST00000325366.13@C5orf22	ENST00000325366.13	protein_coding	31532266,31534272,31535744,31538260,31540949,31541281,31545646,31551293,31552773	31532473,31534417,31535893,31538689,31541011,31541402,31545712,31551432,31555058	Gene ID= ENSG00000082213.17 TPM= 10.51 Transcript Type= protein_coding
chr5	31532287	31554808	31532287	31554808	+	ENST00000510659.5@C5orf22	ENST00000510659.5	protein_coding	31532287,31534272,31535744,31538484,31540949,31541281,31545646,31551293,31552773	31532473,31534417,31535893,31538689,31541011,31541402,31545712,31551432,31554808	Gene ID= ENSG00000082213.17 TPM= 4.67 Transcript Type= nonsense_mediated_decay
chr5	31936122	32011022	31936122	32011022	+	transcript609.chr5.nic@PDZD2	transcript609.chr5.nic	protein_coding	31936122,31983155,31995576,32000139,32010330	31936346,31983656,31995718,32000271,32011022	Gene ID= ENSG00000133401.15 TPM= 3.5 Transcript Type= NA
chr5	32124704	32174350	32124704	32174350	-	ENST00000265070.6@GOLPH3	ENST00000265070.6	protein_coding	32173810,32143749,32135572,32124704	32174350,32143880,32135686,32126636	Gene ID= ENSG00000113384.13 TPM= 434.34 Transcript Type= protein_coding
chr5	32153338	32155251	32153338	32155251	+	transcript624.chr5.nnic@NA	transcript624.chr5.nnic	NA	32153338	32155251	Gene ID= novel_gene_chr5_625 TPM= 2.34 Transcript Type= NA
chr5	32171601	32174332	32171601	32174332	-	transcript626.chr5.nnic@NA	transcript626.chr5.nnic	NA	32171601	32174332	Gene ID= novel_gene_chr5_627 TPM= 4.67 Transcript Type= NA
chr5	32173693	32175266	32173693	32175266	+	transcript622.chr5.nnic@NA	transcript622.chr5.nnic	NA	32173693	32175266	Gene ID= novel_gene_chr5_623 TPM= 8.17 Transcript Type= NA
chr5	32227006	32313009	32227006	32313009	-	ENST00000382142.7@MTMR12	ENST00000382142.7	protein_coding	32312758,32276682,32273980,32271833,32270817,32268701,32263113,32255693,32248772,32248002,32243521,32242057,32239001,32234962,32233773,32227006	32313009,32276742,32274122,32271905,32270947,32268794,32263242,32255768,32248878,32248126,32243599,32242127,32239173,32235129,32233934,32230347	Gene ID= ENSG00000150712.10 TPM= 106.25 Transcript Type= protein_coding
chr5	32354350	32444771	32354350	32444771	-	transcript642.chr5.nnic@ZFR	transcript642.chr5.nnic	protein_coding	32444622,32444229,32419821,32417648,32414969,32406774,32403906,32403106,32400007,32397219,32395159,32390275,32388469,32387549,32385508,32380075,32379115,32364164,32363948,32354350	32444771,32444328,32420103,32417792,32415187,32407006,32404097,32403397,32400203,32397338,32395304,32390437,32388674,32387699,32385649,32380172,32379210,32364275,32364045,32355939	Gene ID= ENSG00000056097.15 TPM= 5.06 Transcript Type= NA
chr5	32354350	32444761	32354350	32444761	-	ENST00000265069.12@ZFR	ENST00000265069.12	protein_coding	32444622,32444229,32419821,32417648,32414969,32406774,32403906,32403106,32400007,32397219,32395159,32390275,32388469,32387549,32385508,32380075,32379115,32364164,32363948,32354350	32444761,32444328,32420103,32417792,32415187,32407021,32404097,32403397,32400203,32397338,32395304,32390437,32388674,32387699,32385649,32380172,32379210,32364275,32364045,32355939	Gene ID= ENSG00000056097.15 TPM= 170.85 Transcript Type= protein_coding
chr5	32585499	32604079	32585499	32604079	+	ENST00000265073.8@SUB1	ENST00000265073.8	protein_coding	32585499,32588512,32591563,32598961,32601005	32585625,32588584,32591685,32599069,32604079	Gene ID= ENSG00000113387.11 TPM= 23.35 Transcript Type= protein_coding
chr5	32709407	32786826	32709407	32786826	+	ENST00000434067.6@NPR3	ENST00000434067.6	protein_coding	32709407,32724698,32738864,32774708,32780722,32782893,32784796,32786234	32710783,32724820,32739030,32774843,32780816,32783028,32784883,32786826	Gene ID= ENSG00000113389.15 TPM= 1.17 Transcript Type= protein_coding
chr5	32710637	32791724	32710637	32791724	+	ENST00000326958.5@NPR3	ENST00000326958.5	protein_coding	32710637,32724698,32738864,32774708,32780722,32782893,32784799,32786234	32710783,32724820,32739030,32774843,32780816,32783028,32784883,32791724	Gene ID= ENSG00000113389.15 TPM= 40.87 Transcript Type= protein_coding
chr5	33436997	33440629	33436997	33440629	-	transcript686.chr5.nnic@NA	transcript686.chr5.nnic	NA	33436997	33440629	Gene ID= novel_gene_chr5_687 TPM= 3.5 Transcript Type= NA
chr5	33439320	33440640	33439320	33440640	-	transcript684.chr5.nnic@NA	transcript684.chr5.nnic	NA	33439320	33440640	Gene ID= novel_gene_chr5_685 TPM= 2.34 Transcript Type= NA
chr5	33440776	33469539	33440776	33469539	+	ENST00000265112.7@TARS	ENST00000265112.7	protein_coding	33440776,33445324,33448541,33453289,33454945,33455587,33456002,33456149,33457257,33458566,33459695,33460902,33461158,33461667,33461906,33462099,33463753,33466871,33467560	33441143,33445404,33448731,33453412,33455066,33455704,33456066,33456227,33457403,33458664,33459861,33461064,33461295,33461744,33462006,33462203,33463825,33466985,33469539	Gene ID= ENSG00000113407.13 TPM= 1.17 Transcript Type= protein_coding
chr5	33440964	33468085	33440964	33468085	+	ENST00000508361.5@TARS	ENST00000508361.5	protein_coding	33440964,33445324,33453289,33454945,33455587,33456002,33456149,33457257,33458566,33459695,33460902,33461158,33461667,33461906,33462099,33463753,33466871,33467560	33441143,33445404,33453412,33455066,33455704,33456066,33456227,33457403,33458664,33459861,33461064,33461295,33461744,33462006,33462203,33463825,33466985,33468085	Gene ID= ENSG00000113407.13 TPM= 7.01 Transcript Type= nonsense_mediated_decay
chr5	33579471	33583787	33579471	33583787	-	transcript692.chr5.nnic@NA	transcript692.chr5.nnic	NA	33579471	33583787	Gene ID= novel_gene_chr5_693 TPM= 2.34 Transcript Type= NA
chr5	33987174	34008031	33987174	34008031	-	ENST00000382072.6@AMACR	ENST00000382072.6	protein_coding	34007773,34005756,33998641,33987174	34008031,34005899,33998827,33989502	Gene ID= ENSG00000242110.7 TPM= 2.34 Transcript Type= protein_coding
chr5	34019453	34043213	34019453	34043213	-	ENST00000231338.7@C1QTNF3	ENST00000231338.7	protein_coding	34043042,34035647,34033304,34028754,34023909,34019453	34043213,34035758,34033458,34028883,34024008,34020742	Gene ID= ENSG00000082196.20 TPM= 2.34 Transcript Type= protein_coding
chr5	34329889	34507743	34329889	34507743	+	transcript706.chr5.nnic@AC138853.1	transcript706.chr5.nnic	processed_pseudogene	34329889,34331814,34415329,34420292,34464834,34468775,34502318,34502898	34329938,34331939,34415394,34420385,34464975,34468869,34502466,34507743	Gene ID= ENSG00000249380.1 TPM= 2.34 Transcript Type= NA
chr5	34434231	34439157	34434231	34439157	+	transcript709.chr5.nnic@NA	transcript709.chr5.nnic	NA	34434231	34439157	Gene ID= novel_gene_chr5_710 TPM= 2.34 Transcript Type= NA
chr5	34656303	34832611	34656303	34832611	+	transcript713.chr5.nic@RAI14	transcript713.chr5.nic	protein_coding	34656303,34686872,34757468,34795939,34803712,34807800,34808584,34811012,34811767,34812180,34813574,34814583,34818797,34821732,34822956,34826330,34829732,34830688	34656475,34686955,34757614,34796027,34803776,34807857,34808654,34811118,34811945,34812208,34813660,34814669,34818851,34821850,34824491,34826479,34829797,34832611	Gene ID= ENSG00000039560.13 TPM= 5.84 Transcript Type= NA
chr5	34656278	34832611	34656278	34832611	+	transcript716.chr5.nic@RAI14	transcript716.chr5.nic	protein_coding	34656278,34686872,34757468,34795939,34803712,34807800,34808584,34811012,34811767,34812180,34814583,34818797,34821732,34822956,34826330,34829732,34830688	34656475,34686955,34757614,34796027,34803776,34807857,34808654,34811118,34811945,34812208,34814669,34818851,34821850,34824491,34826479,34829797,34832611	Gene ID= ENSG00000039560.13 TPM= 3.5 Transcript Type= NA
chr5	34656470	34832611	34656470	34832611	+	transcript717.chr5.nic@RAI14	transcript717.chr5.nic	protein_coding	34656470,34686872,34757468,34795939,34803712,34807800,34808584,34811012,34811767,34812180,34814583,34818797,34821732,34822956,34826330,34829732,34830688	34656696,34686955,34757598,34796027,34803776,34807857,34808654,34811118,34811945,34812208,34814669,34818851,34821850,34824491,34826479,34829797,34832611	Gene ID= ENSG00000039560.13 TPM= 7.01 Transcript Type= NA
chr5	34656324	34689907	34656324	34689907	+	transcript721.chr5.nic@RAI14	transcript721.chr5.nic	protein_coding	34656324,34686872	34656475,34689907	Gene ID= ENSG00000039560.13 TPM= 2.34 Transcript Type= NA
chr5	34656237	34832627	34656237	34832627	+	ENST00000265109.7@RAI14	ENST00000265109.7	protein_coding	34656237,34686872,34757468,34795939,34803712,34807800,34808584,34811012,34811767,34812180,34813574,34814583,34818797,34821732,34822956,34826330,34829732,34830688	34656475,34686955,34757598,34796027,34803776,34807857,34808654,34811118,34811945,34812208,34813660,34814669,34818851,34821850,34824491,34826479,34829797,34832627	Gene ID= ENSG00000039560.13 TPM= 44.37 Transcript Type= protein_coding
chr5	34656439	34830765	34656439	34830765	+	ENST00000512629.5@RAI14	ENST00000512629.5	protein_coding	34656439,34686872,34757468,34795939,34803712,34807800,34808584,34811012,34811767,34812180,34814583,34818797,34821732,34822956,34826330,34829732,34830688	34656475,34686955,34757598,34796027,34803776,34807857,34808654,34811118,34811945,34812208,34814669,34818851,34821850,34824491,34826479,34829797,34830765	Gene ID= ENSG00000039560.13 TPM= 2.34 Transcript Type= protein_coding
chr5	34796343	34798331	34796343	34798331	-	transcript722.chr5.nnic@NA	transcript722.chr5.nnic	NA	34796343	34798331	Gene ID= novel_gene_chr5_723 TPM= 2.34 Transcript Type= NA
chr5	34837549	34839278	34837549	34839278	-	ENST00000606401.1@AC026801.3	ENST00000606401.1	antisense_RNA	34839183,34837549	34839278,34839017	Gene ID= ENSG00000272323.1 TPM= 1.17 Transcript Type= antisense_RNA
chr5	34907491	34929829	34907491	34929829	-	transcript758.chr5.nnic@RAD1	transcript758.chr5.nnic	protein_coding	34929649,34919151,34918232,34918052,34915416,34914695,34913470,34911554,34909258,34907491	34929829,34919267,34918297,34918136,34915626,34914961,34913578,34911812,34909356,34908948	Gene ID= ENSG00000113456.18 TPM= 5.84 Transcript Type= NA
chr5	34908554	34929839	34908554	34929839	-	transcript765.chr5.nnic@RAD1	transcript765.chr5.nnic	protein_coding	34929649,34918232,34918052,34914695,34913470,34911554,34909258,34908554	34929839,34918297,34918136,34914961,34913578,34911812,34909356,34908948	Gene ID= ENSG00000113456.18 TPM= 2.34 Transcript Type= NA
chr5	34915716	34921925	34915716	34921925	+	ENST00000510834.1@BRIX1	ENST00000510834.1	protein_coding	34915716,34918364,34919840	34915897,34918475,34921925	Gene ID= ENSG00000113460.12 TPM= 1.17 Transcript Type= retained_intron
chr5	34929559	34956075	34929559	34956075	+	transcript737.chr5.nic@DNAJC21	transcript737.chr5.nic	protein_coding	34929559,34933815,34935710,34936144,34937326,34938858,34941096,34944867,34945722,34950170,34953926,34954553	34929916,34933908,34935833,34936266,34937630,34939009,34941183,34945025,34945803,34950342,34954001,34956075	Gene ID= ENSG00000168724.14 TPM= 5.84 Transcript Type= NA
chr5	34929593	34955200	34929593	34955200	+	ENST00000342382.8@DNAJC21	ENST00000342382.8	protein_coding	34929593,34933815,34935710,34936144,34937326,34938858,34941096,34944867,34945761,34950170,34953926,34954553	34929916,34933908,34935833,34936266,34937630,34939009,34941183,34945025,34945803,34950342,34954001,34955200	Gene ID= ENSG00000168724.14 TPM= 24.52 Transcript Type= protein_coding
chr5	35617844	35671575	35617844	35671575	+	ENST00000282469.10@SPEF2	ENST00000282469.10	protein_coding	35617844,35628460,35641431,35644355,35646667,35649361,35654540,35659019,35667072,35670059	35618055,35628562,35641683,35644525,35646807,35649425,35654726,35659207,35667259,35671575	Gene ID= ENSG00000152582.13 TPM= 2.34 Transcript Type= protein_coding
chr5	35856514	35879603	35856514	35879603	+	transcript787.chr5.nic@IL7R	transcript787.chr5.nic	protein_coding	35856514,35860852,35867306,35871056,35873480,35875512,35875983	35857059,35860990,35867463,35871213,35873648,35875587,35879603	Gene ID= ENSG00000168685.14 TPM= 35.03 Transcript Type= NA
chr5	35856849	35879603	35856849	35879603	+	ENST00000303115.7@IL7R	ENST00000303115.7	protein_coding	35856849,35860852,35867306,35871056,35873480,35874449,35875512,35875983	35857059,35860990,35867463,35871213,35873648,35874542,35875587,35879603	Gene ID= ENSG00000168685.14 TPM= 124.93 Transcript Type= protein_coding
chr5	36098412	36151961	36098412	36151961	-	ENST00000296603.4@LMBRD2	ENST00000296603.4	protein_coding	36151556,36143176,36142502,36141107,36137274,36136309,36124191,36122848,36122280,36117735,36116460,36115015,36114424,36111155,36109945,36108534,36105068,36098412	36151961,36143406,36142599,36141202,36137441,36136519,36124265,36122961,36122463,36117916,36116593,36115120,36114521,36111258,36109991,36108639,36105197,36104106	Gene ID= ENSG00000164187.6 TPM= 1.17 Transcript Type= protein_coding
chr5	36106510	36151917	36106510	36151917	-	transcript799.chr5.nic@LMBRD2	transcript799.chr5.nic	protein_coding	36151556,36143176,36142502,36141107,36137274,36136309,36124191,36122848,36122280,36117735,36116460,36115015,36114424,36111155,36109945,36106510	36151917,36143406,36142599,36141202,36137441,36136519,36124265,36122961,36122463,36117916,36116593,36115120,36114521,36111258,36109991,36108639	Gene ID= ENSG00000164187.6 TPM= 2.34 Transcript Type= NA
chr5	36152067	36184319	36152067	36184319	+	ENST00000274255.10@SKP2	ENST00000274255.10	protein_coding	36152067,36152771,36163645,36166519,36168313,36170344,36171603,36176965,36177185,36181818	36152270,36153042,36163756,36166662,36168447,36170442,36171733,36177016,36177292,36184319	Gene ID= ENSG00000145604.15 TPM= 4.67 Transcript Type= protein_coding
chr5	36151989	36184041	36151989	36184041	+	ENST00000274254.9@SKP2	ENST00000274254.9	protein_coding	36151989,36152771,36163645,36166519,36168313,36170344,36171603,36176965,36177185,36183840	36152270,36153042,36163756,36166662,36168447,36170442,36171733,36177016,36177292,36184041	Gene ID= ENSG00000145604.15 TPM= 1.17 Transcript Type= protein_coding
chr5	36177638	36182684	36177638	36182684	-	transcript805.chr5.nnic@NA	transcript805.chr5.nnic	NA	36177638	36182684	Gene ID= novel_gene_chr5_806 TPM= 2.34 Transcript Type= NA
chr5	36192885	36241931	36192885	36241931	-	transcript807.chr5.nic@NADK2	transcript807.chr5.nic	protein_coding	36241499,36227477,36226475,36225542,36219596,36217748,36211844,36208625,36207170,36201106,36200227,36197541,36192885	36241931,36227565,36226563,36225623,36219679,36217884,36211922,36208690,36207265,36201161,36200280,36197664,36195282	Gene ID= ENSG00000152620.12 TPM= 7.01 Transcript Type= NA
chr5	36248434	36301902	36248434	36301902	-	ENST00000296604.7@RANBP3L	ENST00000296604.7	protein_coding	36301326,36271253,36269951,36269390,36265449,36264959,36261939,36260780,36257454,36256941,36255470,36253647,36251313,36248434	36301902,36271311,36269990,36269467,36265520,36265098,36262042,36260864,36257556,36257071,36255590,36253789,36251499,36249697	Gene ID= ENSG00000164188.8 TPM= 1.17 Transcript Type= protein_coding
chr5	36606355	36688334	36606355	36688334	+	ENST00000265113.8@SLC1A3	ENST00000265113.8	protein_coding	36606355,36608329,36629450,36671029,36674049,36676892,36679627,36680395,36683864,36686065	36606735,36608604,36629587,36671233,36674091,36677184,36679860,36680589,36683998,36688334	Gene ID= ENSG00000079215.13 TPM= 21.02 Transcript Type= protein_coding
chr5	36871362	36876659	36871362	36876659	-	transcript829.chr5.nnic@NA	transcript829.chr5.nnic	NA	36871362	36876659	Gene ID= novel_gene_chr5_830 TPM= 9.34 Transcript Type= NA
chr5	36876759	37066413	36876759	37066413	+	ENST00000282516.12@NIPBL	ENST00000282516.12	protein_coding	36876759,36953618,36955472,36958104,36961484,36962123,36970876,36971945,36975776,36984676,36995622,37000373,37000817,37000989,37002662,37003261,37006357,37007323,37008008,37008623,37010087,37014683,37016038,37017019,37019311,37020459,37020775,37022051,37022244,37024585,37026229,37027359,37036379,37038602,37044347,37044636,37045443,37046109,37048502,37049111,37051779,37052366,37057186,37058891,37060844,37063790,37064527	36877178,36953760,36955637,36958231,36961583,36962274,36971036,36972041,36976402,36986301,36995804,37000570,37000888,37001078,37002765,37003347,37006588,37007474,37008088,37008723,37010225,37014765,37016170,37017162,37019400,37020673,37020877,37022149,37022390,37024719,37026327,37027412,37036487,37038738,37044487,37044729,37045597,37046199,37048675,37049301,37051886,37052566,37057332,37059165,37061018,37063978,37066413	Gene ID= ENSG00000164190.17 TPM= 17.51 Transcript Type= protein_coding
chr5	37288137	37371181	37288137	37371181	-	ENST00000231498.7@NUP155	ENST00000231498.7	protein_coding	37370821,37364247,37363888,37358081,37352737,37351190,37350160,37349172,37348505,37342549,37341090,37337818,37333463,37331685,37330038,37329190,37328358,37327629,37325901,37323992,37317988,37314198,37310552,37309129,37307297,37305057,37304739,37303260,37302779,37301437,37299448,37298868,37294329,37292879,37288137	37371181,37364384,37363984,37358151,37352829,37351356,37350265,37349245,37348596,37342646,37341242,37337918,37333633,37331795,37330132,37329278,37328420,37327776,37325967,37324107,37318085,37314328,37310743,37309267,37307432,37305210,37304843,37303414,37302908,37301550,37299568,37298978,37294465,37292985,37292038	Gene ID= ENSG00000113569.15 TPM= 4.67 Transcript Type= protein_coding
chr5	37379212	37753435	37379212	37753435	+	ENST00000265107.8@WDR70	ENST00000265107.8	protein_coding	37379212,37379489,37381602,37392000,37396375,37437922,37443239,37479834,37516514,37605064,37697655,37701058,37702949,37721115,37722855,37724934,37726883,37752486	37379392,37379554,37381685,37392120,37396570,37437981,37443372,37479987,37516590,37605238,37697754,37701142,37703087,37721215,37722934,37725050,37727045,37753435	Gene ID= ENSG00000082068.8 TPM= 18.68 Transcript Type= protein_coding
chr5	38445540	38464556	38445540	38464556	+	ENST00000397210.7@EGFLAM	ENST00000397210.7	protein_coding	38445540,38448301,38451315,38458311,38462908,38463832	38445702,38448379,38451458,38458394,38463011,38464556	Gene ID= ENSG00000164318.17 TPM= 1.17 Transcript Type= protein_coding
chr5	38845999	38935641	38845999	38935641	+	ENST00000274276.7@OSMR	ENST00000274276.7	protein_coding	38845999,38869032,38876201,38881593,38883827,38885349,38886039,38903882,38904353,38917546,38918840,38921615,38923150,38924422,38925204,38931883,38932463,38932872	38846387,38869117,38876373,38881764,38884111,38885484,38886190,38904024,38904503,38917622,38919062,38921794,38923254,38924595,38925371,38931964,38932535,38935641	Gene ID= ENSG00000145623.12 TPM= 46.7 Transcript Type= protein_coding
chr5	38890604	38894354	38890604	38894354	-	transcript869.chr5.nnic@NA	transcript869.chr5.nnic	NA	38890604	38894354	Gene ID= novel_gene_chr5_870 TPM= 4.67 Transcript Type= NA
chr5	38937919	39074408	38937919	39074408	-	ENST00000357387.7@RICTOR	ENST00000357387.7	protein_coding	39074329,39074111,39021039,39003558,39002535,38996819,38990949,38981867,38978583,38975537,38971877,38967943,38967337,38967161,38966641,38964792,38962876,38962485,38962315,38960398,38959779,38959195,38958667,38958443,38957652,38955595,38954774,38953461,38952985,38952196,38949712,38947264,38946468,38945491,38944913,38944446,38942833,38937919	39074408,39074158,39021136,39003622,39002666,38996882,38991075,38982036,38978650,38975604,38971959,38968030,38967427,38967227,38966721,38964892,38963041,38962586,38962361,38960533,38959978,38959321,38958831,38958519,38957730,38955704,38954861,38953553,38953091,38952425,38950720,38947441,38946552,38945724,38945068,38944569,38942971,38942378	Gene ID= ENSG00000164327.12 TPM= 4.67 Transcript Type= protein_coding
chr5	38980880	39074399	38980880	39074399	-	ENST00000513566.1@RICTOR	ENST00000513566.1	protein_coding	39074329,39074111,39021039,39003558,39002535,38996819,38990949,38980880	39074399,39074158,39021136,39003622,39002666,38996882,38991075,38982036	Gene ID= ENSG00000164327.12 TPM= 1.17 Transcript Type= retained_intron
chr5	39105236	39203022	39105236	39203022	-	transcript874.chr5.nic@FYB1	transcript874.chr5.nic	protein_coding	39201826,39153448,39141095,39139233,39138657,39137600,39134855,39134208,39130590,39127741,39125998,39124253,39122336,39119535,39118874,39110356,39108231,39105236	39203022,39153604,39141141,39139252,39138691,39137720,39135014,39134349,39130612,39127807,39126135,39124278,39122402,39119634,39119036,39110389,39108262,39107465	Gene ID= ENSG00000082074.15 TPM= 9.34 Transcript Type= NA
chr5	39137652	39219635	39137652	39219635	-	transcript877.chr5.nic@FYB1	transcript877.chr5.nic	protein_coding	39219443,39201826,39153448,39141095,39139233,39138657,39137652	39219635,39202987,39153604,39141141,39139252,39138691,39137720	Gene ID= ENSG00000082074.15 TPM= 2.34 Transcript Type= NA
chr5	39107302	39270657	39107302	39270657	-	ENST00000512982.2@FYB1	ENST00000512982.2	protein_coding	39270569,39201826,39153448,39141095,39139233,39138657,39137600,39134855,39134208,39130590,39127741,39125998,39124253,39122336,39119535,39118874,39110356,39108231,39107302	39270657,39202987,39153604,39141141,39139252,39138691,39137720,39135014,39134349,39130612,39127807,39126135,39124278,39122402,39119634,39119036,39110389,39108262,39107465	Gene ID= ENSG00000082074.15 TPM= 1.17 Transcript Type= protein_coding
chr5	39107284	39203027	39107284	39203027	-	ENST00000515010.5@FYB1	ENST00000515010.5	protein_coding	39201826,39153448,39141095,39139233,39138657,39137600,39134855,39134208,39130590,39127741,39124253,39122336,39119535,39118874,39110356,39108231,39107284	39203027,39153604,39141141,39139252,39138691,39137720,39135014,39134349,39130612,39127807,39124278,39122402,39119634,39119036,39110389,39108262,39107465	Gene ID= ENSG00000082074.15 TPM= 1.17 Transcript Type= protein_coding
chr5	39105236	39219606	39105236	39219606	-	ENST00000351578.10@FYB1	ENST00000351578.10	protein_coding	39219443,39201826,39153448,39141095,39139233,39138657,39137600,39134855,39134208,39130590,39127741,39124253,39122336,39119535,39118874,39110356,39108231,39105236	39219606,39202987,39153604,39141141,39139252,39138691,39137720,39135014,39134349,39130612,39127807,39124278,39122402,39119634,39119036,39110389,39108262,39107465	Gene ID= ENSG00000082074.15 TPM= 2.34 Transcript Type= protein_coding
chr5	39371679	39425229	39371679	39425229	-	transcript881.chr5.nnic@DAB2	transcript881.chr5.nnic	protein_coding	39424804,39394230,39393254,39392365,39390444,39389852,39389097,39388799,39388305,39382618,39381454,39376650,39375997,39375014,39373390,39371679	39425229,39394421,39393393,39392463,39390575,39389932,39389123,39388852,39388367,39383271,39381616,39377282,39376106,39375084,39373425,39372708	Gene ID= ENSG00000153071.14 TPM= 5.84 Transcript Type= NA
chr5	39371675	39425233	39371675	39425233	-	ENST00000545653.5@DAB2	ENST00000545653.5	protein_coding	39424804,39394230,39393254,39392365,39390444,39389852,39389097,39388799,39382618,39381454,39376650,39375997,39375014,39371675	39425233,39394421,39393393,39392463,39390575,39389932,39389123,39388852,39383271,39381616,39377282,39376106,39375084,39373425	Gene ID= ENSG00000153071.14 TPM= 15.18 Transcript Type= protein_coding
chr5	39385168	39425229	39385168	39425229	-	transcript895.chr5.nic@DAB2	transcript895.chr5.nic	protein_coding	39424804,39394230,39393254,39392365,39390444,39389852,39389097,39388799,39388305,39385168	39425229,39394421,39393393,39392463,39390575,39389932,39389123,39388852,39388367,39385428	Gene ID= ENSG00000153071.14 TPM= 3.5 Transcript Type= NA
chr5	39386167	39425229	39386167	39425229	-	transcript898.chr5.nic@DAB2	transcript898.chr5.nic	protein_coding	39424804,39394230,39393254,39392365,39390444,39389852,39389097,39388799,39386167	39425229,39394421,39393393,39392463,39390575,39389932,39389123,39388852,39388367	Gene ID= ENSG00000153071.14 TPM= 7.01 Transcript Type= NA
chr5	39371678	39425170	39371678	39425170	-	ENST00000320816.10@DAB2	ENST00000320816.10	protein_coding	39424804,39394230,39393254,39392365,39390444,39389852,39389097,39388799,39388305,39382618,39381454,39376650,39375997,39375014,39371678	39425170,39394421,39393393,39392463,39390575,39389932,39389123,39388852,39388367,39383271,39381616,39377282,39376106,39375084,39373425	Gene ID= ENSG00000153071.14 TPM= 33.86 Transcript Type= protein_coding
chr5	39377161	39379462	39377161	39379462	+	transcript904.chr5.nnic@NA	transcript904.chr5.nnic	NA	39377161	39379462	Gene ID= novel_gene_chr5_905 TPM= 17.51 Transcript Type= NA
chr5	40714475	40755975	40714475	40755975	-	ENST00000337702.4@TTC33	ENST00000337702.4	protein_coding	40755824,40746798,40730262,40728345,40714475	40755975,40747019,40730343,40728476,40716498	Gene ID= ENSG00000113638.13 TPM= 17.51 Transcript Type= protein_coding
chr5	40679498	40693735	40679498	40693735	+	ENST00000302472.3@PTGER4	ENST00000302472.3	protein_coding	40679498,40680951,40691779	40680478,40681860,40693735	Gene ID= ENSG00000171522.5 TPM= 29.19 Transcript Type= protein_coding
chr5	40759379	40798198	40759379	40798198	-	ENST00000397128.6@PRKAA1	ENST00000397128.6	protein_coding	40798063,40777445,40775410,40771719,40769416,40767466,40764752,40764514,40759379	40798198,40777586,40775503,40771863,40769503,40767690,40765238,40764640,40763022	Gene ID= ENSG00000132356.11 TPM= 14.01 Transcript Type= protein_coding
chr5	40759822	40798191	40759822	40798191	-	transcript917.chr5.nic@PRKAA1	transcript917.chr5.nic	protein_coding	40798063,40777445,40775410,40771719,40769416,40767466,40764752,40759822	40798191,40777586,40775503,40771863,40769503,40767690,40765238,40764640	Gene ID= ENSG00000132356.11 TPM= 4.67 Transcript Type= NA
chr5	40762770	40798191	40762770	40798191	-	transcript920.chr5.nic@PRKAA1	transcript920.chr5.nic	protein_coding	40798063,40775410,40771719,40769416,40767466,40764752,40764514,40762770	40798191,40777586,40771863,40769503,40767690,40765238,40764640,40763022	Gene ID= ENSG00000132356.11 TPM= 4.67 Transcript Type= NA
chr5	40825265	40835257	40825265	40835257	-	transcript933.chr5.nnic@RPL37	transcript933.chr5.nnic	protein_coding	40835183,40834471,40834181,40832442,40825265	40835257,40834606,40834265,40832573,40827951	Gene ID= ENSG00000145592.13 TPM= 4.67 Transcript Type= NA
chr5	40825262	40835335	40825262	40835335	-	ENST00000274242.9@RPL37	ENST00000274242.9	protein_coding	40835183,40834471,40834181,40825262	40835335,40834606,40834265,40832573	Gene ID= ENSG00000145592.13 TPM= 114.42 Transcript Type= protein_coding
chr5	40841184	40855354	40841184	40855354	+	ENST00000254691.9@CARD6	ENST00000254691.9	protein_coding	40841184,40843152,40852174	40841665,40843709,40855354	Gene ID= ENSG00000132357.13 TPM= 31.53 Transcript Type= protein_coding
chr5	40909252	40982939	40909252	40982939	+	ENST00000313164.9@C7	ENST00000313164.9	protein_coding	40909252,40928580,40931064,40934325,40936338,40937552,40945198,40947602,40949904,40955387,40958033,40959449,40962085,40964741,40972403,40976750,40979725,40981392	40909616,40928635,40931139,40934466,40936485,40937690,40945368,40947845,40950014,40955553,40958261,40959620,40962172,40964873,40972594,40976840,40979909,40982939	Gene ID= ENSG00000112936.18 TPM= 541.76 Transcript Type= protein_coding
chr5	41730065	41870519	41730065	41870519	-	ENST00000196371.9@OXCT1	ENST00000196371.9	protein_coding	41870281,41862642,41861314,41853419,41850030,41842675,41840451,41807331,41805567,41803069,41801022,41794677,41794003,41762111,41749527,41739390,41730065	41870519,41862750,41861404,41853554,41850179,41842781,41840511,41807438,41805681,41803163,41801070,41794749,41794078,41762200,41749607,41739491,41731770	Gene ID= ENSG00000083720.12 TPM= 38.53 Transcript Type= protein_coding
chr5	41904349	41921636	41904349	41921636	+	ENST00000381647.6@C5orf51	ENST00000381647.6	protein_coding	41904349,41907736,41909746,41911048,41912069,41917016	41904467,41907842,41909892,41911179,41912183,41921636	Gene ID= ENSG00000205765.8 TPM= 17.51 Transcript Type= protein_coding
chr5	42756801	42802360	42756801	42802360	+	ENST00000361970.9@CCDC152	ENST00000361970.9	protein_coding	42756801,42759120,42762443,42769597,42779458,42783474,42796829,42799375,42799659	42756885,42759208,42762548,42769665,42779522,42783576,42796956,42799458,42802360	Gene ID= ENSG00000198865.9 TPM= 1.17 Transcript Type= protein_coding
chr5	42800112	42811892	42800112	42811892	-	ENST00000511224.5@SELENOP	ENST00000511224.5	protein_coding	42811836,42809760,42808151,42806896,42804656,42800112	42811892,42809788,42808366,42807108,42804773,42801331	Gene ID= ENSG00000250722.5 TPM= 136.61 Transcript Type= protein_coding
chr5	42799880	42812079	42799880	42812079	-	ENST00000514985.5@SELENOP	ENST00000514985.5	protein_coding	42811836,42808151,42806896,42804656,42799880	42812079,42808366,42807108,42804773,42801331	Gene ID= ENSG00000250722.5 TPM= 1126.14 Transcript Type= protein_coding
chr5	42799883	42811892	42799883	42811892	-	ENST00000512980.5@SELENOP	ENST00000512980.5	protein_coding	42811836,42808151,42804656,42799883	42811892,42808366,42807108,42801331	Gene ID= ENSG00000250722.5 TPM= 8.17 Transcript Type= retained_intron
chr5	42985401	42993336	42985401	42993336	-	transcript993.chr5.nnic@NA	transcript993.chr5.nnic	NA	42992893,42990839,42985401	42993336,42992827,42985662	Gene ID= novel_gene_chr5_994 TPM= 4.67 Transcript Type= NA
chr5	43039368	43040362	43039368	43040362	-	transcript1006.chr5.nnic@NA	transcript1006.chr5.nnic	NA	43039368	43040362	Gene ID= novel_gene_chr5_1007 TPM= 2.34 Transcript Type= NA
chr5	43066024	43069055	43066024	43069055	+	transcript1003.chr5.nnic@ZNF131	transcript1003.chr5.nnic	protein_coding	43066024,43067970	43067634,43069055	Gene ID= ENSG00000172262.11 TPM= 3.5 Transcript Type= NA
chr5	43121596	43176324	43121596	43176324	+	ENST00000505606.6@ZNF131	ENST00000505606.6	protein_coding	43121596,43122039,43123209,43139165,43161249,43161709,43173318,43174447	43121828,43122177,43123310,43139309,43161606,43161931,43173448,43176324	Gene ID= ENSG00000172262.11 TPM= 1.17 Transcript Type= protein_coding
chr5	43121567	43176247	43121567	43176247	+	transcript1021.chr5.nic@ZNF131	transcript1021.chr5.nic	protein_coding	43121567,43123209,43139165,43161249,43173318,43174447	43122177,43123310,43139309,43161931,43173448,43176247	Gene ID= ENSG00000172262.11 TPM= 4.67 Transcript Type= NA
chr5	43121598	43176247	43121598	43176247	+	ENST00000509634.5@ZNF131	ENST00000509634.5	protein_coding	43121598,43123209,43139165,43161249,43161709,43173318,43174447	43122177,43123310,43139309,43161606,43161931,43173448,43176247	Gene ID= ENSG00000172262.11 TPM= 1.17 Transcript Type= protein_coding
chr5	43192232	43280850	43192232	43280850	+	transcript1026.chr5.nic@NIM1K	transcript1026.chr5.nic	protein_coding	43192232,43240260,43245082,43277057,43279980	43192411,43240390,43246067,43277325,43280850	Gene ID= ENSG00000177453.7 TPM= 5.25 Transcript Type= NA
chr5	43192225	43280850	43192225	43280850	+	ENST00000326035.6@NIM1K	ENST00000326035.6	protein_coding	43192225,43245082,43277057,43279980	43192411,43246067,43277325,43280850	Gene ID= ENSG00000177453.7 TPM= 4.09 Transcript Type= protein_coding
chr5	43289395	43313493	43289395	43313493	-	ENST00000325110.10@HMGCS1	ENST00000325110.10	protein_coding	43313356,43307766,43298518,43298009,43297002,43295752,43294691,43294056,43292848,43292474,43289395	43313493,43307824,43298975,43298134,43297166,43295917,43294861,43294162,43292973,43292637,43291220	Gene ID= ENSG00000112972.14 TPM= 11.09 Transcript Type= protein_coding
chr5	43289395	43313512	43289395	43313512	-	ENST00000433297.2@HMGCS1	ENST00000433297.2	protein_coding	43313356,43298518,43298009,43297002,43295752,43294691,43294056,43292848,43292474,43289395	43313512,43298975,43298134,43297166,43295917,43294861,43294162,43292973,43292637,43291220	Gene ID= ENSG00000112972.14 TPM= 7.59 Transcript Type= protein_coding
chr5	43291988	43313410	43291988	43313410	-	transcript1038.chr5.nic@HMGCS1	transcript1038.chr5.nic	protein_coding	43313356,43307766,43298518,43298009,43297002,43295752,43294691,43294056,43291988	43313410,43307824,43298975,43298134,43297166,43295917,43294861,43294162,43292973	Gene ID= ENSG00000112972.14 TPM= 2.34 Transcript Type= NA
chr5	43291988	43313408	43291988	43313408	-	transcript1041.chr5.nic@HMGCS1	transcript1041.chr5.nic	protein_coding	43313356,43307766,43297002,43295752,43294691,43294056,43291988	43313408,43307824,43298975,43295917,43294861,43294162,43292973	Gene ID= ENSG00000112972.14 TPM= 5.84 Transcript Type= NA
chr5	43378512	43382052	43378512	43382052	-	transcript1050.chr5.nnic@NA	transcript1050.chr5.nnic	NA	43378512	43382052	Gene ID= novel_gene_chr5_1051 TPM= 4.67 Transcript Type= NA
chr5	43444677	43484387	43444677	43484387	-	transcript1063.chr5.nic@TMEM267	transcript1063.chr5.nic	protein_coding	43483822,43444677	43484387,43446557	Gene ID= ENSG00000151881.14 TPM= 2.34 Transcript Type= NA
chr5	43444670	43483885	43444670	43483885	-	ENST00000397080.7@TMEM267	ENST00000397080.7	protein_coding	43483822,43453658,43444670	43483885,43454043,43446557	Gene ID= ENSG00000151881.14 TPM= 11.68 Transcript Type= protein_coding
chr5	43486701	43515145	43486701	43515145	-	ENST00000306862.6@C5orf34	ENST00000306862.6	protein_coding	43514806,43509145,43508577,43505748,43503665,43502372,43494510,43493543,43492720,43492215,43490631,43487909,43486701	43515145,43509375,43508666,43506394,43503760,43502495,43494601,43493612,43492890,43492309,43490729,43487949,43487111	Gene ID= ENSG00000172244.8 TPM= 1.17 Transcript Type= protein_coding
chr5	43527093	43556846	43527093	43556846	-	transcript1077.chr5.nnic@PAIP1	transcript1077.chr5.nnic	protein_coding	43556440,43555830,43547728,43543004,43538924,43536819,43535534,43534853,43533738,43529786,43527093	43556846,43555999,43547913,43543116,43539035,43536944,43535640,43534970,43533792,43529879,43527469	Gene ID= ENSG00000172239.13 TPM= 7.97 Transcript Type= NA
chr5	43526267	43557079	43526267	43557079	-	ENST00000306846.7@PAIP1	ENST00000306846.7	protein_coding	43556582,43555830,43547728,43543004,43538924,43536819,43535534,43534853,43533738,43529786,43526267	43557079,43555999,43547913,43543116,43539035,43536944,43535640,43534970,43533792,43529879,43527469	Gene ID= ENSG00000172239.13 TPM= 15.56 Transcript Type= protein_coding
chr5	43527092	43557093	43527092	43557093	-	ENST00000436644.6@PAIP1	ENST00000436644.6	protein_coding	43556819,43555830,43547728,43543004,43538924,43536819,43535534,43534853,43533738,43529786,43527092	43557093,43555999,43547913,43543116,43539035,43536944,43535640,43534970,43533792,43529879,43527469	Gene ID= ENSG00000172239.13 TPM= 81.53 Transcript Type= protein_coding
chr5	43552683	43556015	43552683	43556015	+	transcript1091.chr5.nnic@NA	transcript1091.chr5.nnic	NA	43552683	43556015	Gene ID= novel_gene_chr5_1092 TPM= 2.34 Transcript Type= NA
chr5	43603127	43705232	43603127	43705232	+	ENST00000344920.8@NNT	ENST00000344920.8	protein_coding	43603127,43609143,43612908,43615848,43619032,43624032,43628200,43644192,43644611,43645357,43649147,43650477,43651739,43653018,43655840,43656653,43659171,43675511,43677725,43700119,43702621,43704255	43603294,43609346,43613137,43616065,43619119,43624120,43628387,43644325,43644802,43645510,43649308,43650587,43651884,43653213,43656073,43656813,43659350,43675670,43677806,43700237,43702736,43705232	Gene ID= ENSG00000112992.16 TPM= 36.2 Transcript Type= protein_coding
chr5	44808925	44815522	44808925	44815522	+	ENST00000507110.5@MRPS30	ENST00000507110.5	protein_coding	44808925,44811009,44811915,44813106,44814913	44809563,44811154,44812020,44813282,44815522	Gene ID= ENSG00000112996.10 TPM= 28.02 Transcript Type= protein_coding
chr5	44815684	44821012	44815684	44821012	+	transcript1123.chr5.nnic@NA	transcript1123.chr5.nnic	NA	44815684	44821012	Gene ID= novel_gene_chr5_1124 TPM= 7.01 Transcript Type= NA
chr5	50396192	50441367	50396192	50441367	-	ENST00000303221.9@EMB	ENST00000303221.9	protein_coding	50441040,50428144,50411197,50410877,50405725,50403178,50402286,50399859,50396192	50441367,50428227,50411383,50410965,50405852,50403454,50402319,50399913,50399290	Gene ID= ENSG00000170571.11 TPM= 12.84 Transcript Type= protein_coding
chr5	50398677	50441350	50398677	50441350	-	ENST00000508934.5@EMB	ENST00000508934.5	protein_coding	50441040,50428144,50411197,50410877,50405725,50403178,50402286,50399859,50398677	50441350,50428227,50411221,50410965,50405852,50403454,50402319,50399913,50399290	Gene ID= ENSG00000170571.11 TPM= 1.17 Transcript Type= protein_coding
chr5	50666623	50842341	50666623	50842341	+	transcript1139.chr5.nic@PARP8	transcript1139.chr5.nic	protein_coding	50666623,50667085,50668071,50750151,50759643,50760292,50761821,50763148,50778069,50778560,50788523,50794207,50794853,50796982,50797138,50815432,50821213,50822335,50824908,50826755,50827944,50828312,50829892,50832781,50833979,50834931,50841966	50666997,50667186,50668125,50750188,50759732,50760362,50761898,50763242,50778129,50778650,50788589,50794332,50795417,50797032,50797233,50815524,50821338,50822400,50824975,50826803,50828056,50828384,50829961,50832854,50834048,50835015,50842341	Gene ID= ENSG00000151883.17 TPM= 9.73 Transcript Type= NA
chr5	50666254	50842341	50666254	50842341	+	transcript1145.chr5.nnic@PARP8	transcript1145.chr5.nnic	protein_coding	50666254,50668071,50750151,50759643,50760292,50761821,50763148,50778560,50788523,50794207,50794853,50796982,50797138,50815432,50821213,50822335,50824908,50826755,50827944,50828312,50829892,50832781,50833979,50834931,50841966	50667186,50668125,50750188,50759732,50760362,50761898,50763250,50778650,50788589,50794332,50795417,50797032,50797233,50815524,50821338,50822400,50824975,50826803,50828056,50828384,50829961,50832854,50834048,50835015,50842341	Gene ID= ENSG00000151883.17 TPM= 3.89 Transcript Type= NA
chr5	50667919	50842341	50667919	50842341	+	transcript1147.chr5.nic@PARP8	transcript1147.chr5.nic	protein_coding	50667919,50750151,50759643,50761821,50763148,50778069,50778560,50788523,50794207,50794853,50796982,50797138,50815432,50821213,50822335,50824908,50826755,50827944,50828312,50829892,50832781,50833979,50834931,50841966	50668125,50750188,50759732,50761898,50763242,50778129,50778650,50788589,50794332,50795417,50797032,50797233,50815524,50821338,50822400,50824975,50826803,50828056,50828384,50829961,50832854,50834048,50835015,50842341	Gene ID= ENSG00000151883.17 TPM= 3.89 Transcript Type= NA
chr5	52787948	52955513	52787948	52955513	+	transcript1154.chr5.nnic@ITGA1	transcript1154.chr5.nnic	protein_coding	52787948,52849365,52861447,52864763,52864971,52865690,52881873,52887815,52893675,52897455,52898239,52905763,52908898,52910162,52915464,52918732,52920332,52922777,52925278,52927584,52929625,52932047,52933894,52937401,52939590,52939840,52944943,52947345,52952407,52955371	52788414,52849485,52861559,52864851,52865082,52865817,52882021,52887965,52893840,52897528,52898383,52905908,52909041,52910419,52915594,52918898,52920468,52922887,52925487,52927664,52929701,52932136,52933996,52937514,52939691,52939944,52945035,52947461,52955350,52955513	Gene ID= ENSG00000213949.8 TPM= 11.68 Transcript Type= NA
chr5	52787947	52825210	52787947	52825210	+	ENST00000504086.1@ITGA1	ENST00000504086.1	protein_coding	52787947,52824313	52788414,52825210	Gene ID= ENSG00000213949.8 TPM= 2.34 Transcript Type= processed_transcript
chr5	52787940	52804046	52787940	52804046	+	ENST00000274311.2@PELO	ENST00000274311.2	protein_coding	52787940,52799885,52801409	52788414,52801120,52804046	Gene ID= ENSG00000152684.10 TPM= 8.17 Transcript Type= protein_coding
chr5	53098062	53109759	53098062	53109759	-	ENST00000396954.7@MOCS2	ENST00000396954.7	protein_coding	53109251,53108522,53107077,53102097,53101359,53100411,53098062	53109759,53108643,53107221,53102224,53101509,53100534,53098667	Gene ID= ENSG00000164172.18 TPM= 2.34 Transcript Type= protein_coding
chr5	53098068	53109778	53098068	53109778	-	ENST00000450852.7@MOCS2	ENST00000450852.7	protein_coding	53109712,53108522,53107077,53102097,53101359,53100411,53098068	53109778,53108643,53107221,53102224,53101509,53100534,53098667	Gene ID= ENSG00000164172.18 TPM= 43.2 Transcript Type= protein_coding
chr5	53480409	53487134	53480409	53487134	+	ENST00000256759.7@FST	ENST00000256759.7	protein_coding	53480409,53482880,53483504,53484069,53484997,53485951	53480876,53483071,53483722,53484293,53485227,53487134	Gene ID= ENSG00000134363.11 TPM= 9.34 Transcript Type= protein_coding
chr5	53560635	53683340	53560635	53683340	+	ENST00000296684.9@NDUFS4	ENST00000296684.9	protein_coding	53560635,53603452,53646233,53658551,53683118	53560760,53603530,53646405,53658624,53683340	Gene ID= ENSG00000164258.11 TPM= 23.35 Transcript Type= protein_coding
chr5	53560647	53683338	53560647	53683338	+	ENST00000506974.5@NDUFS4	ENST00000506974.5	protein_coding	53560647,53603452,53604724,53646233,53658551,53683118	53560760,53603530,53604895,53646405,53658624,53683338	Gene ID= ENSG00000164258.11 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr5	54307393	54310524	54307393	54310524	+	transcript1190.chr5.nnic@NA	transcript1190.chr5.nnic	NA	54307393	54310524	Gene ID= novel_gene_chr5_1191 TPM= 2.34 Transcript Type= NA
chr5	54517763	54546585	54517763	54546585	+	ENST00000381410.4@SNX18	ENST00000381410.4	protein_coding	54517763,54543179	54519573,54546585	Gene ID= ENSG00000178996.13 TPM= 10.51 Transcript Type= protein_coding
chr5	55024253	55034570	55024253	55034570	+	ENST00000231009.2@GZMK	ENST00000231009.2	protein_coding	55024253,55024660,55030434,55031364,55033765	55024386,55024807,55030584,55031633,55034570	Gene ID= ENSG00000113088.5 TPM= 2.34 Transcript Type= protein_coding
chr5	55102648	55110252	55102648	55110252	+	ENST00000274306.6@GZMA	ENST00000274306.6	protein_coding	55102648,55105474,55107794,55108125,55110021	55102752,55105618,55107935,55108394,55110252	Gene ID= ENSG00000145649.7 TPM= 4.67 Transcript Type= protein_coding
chr5	55160118	55164924	55160118	55164924	+	ENST00000503787.5@GPX8	ENST00000503787.5	protein_coding	55160118,55160994,55164055	55160396,55161255,55164924	Gene ID= ENSG00000164294.13 TPM= 1.17 Transcript Type= protein_coding
chr5	55256245	55307694	55256245	55307694	-	transcript1220.chr5.nic@DHX29	transcript1220.chr5.nic	protein_coding	55307387,55298591,55297285,55296220,55295379,55294017,55290218,55289270,55285696,55285293,55283203,55281372,55277106,55276266,55274866,55274614,55273293,55272087,55270578,55270412,55269413,55267686,55267138,55262630,55261368,55259848,55256245	55307694,55298664,55297398,55296349,55295524,55294145,55290344,55289428,55285861,55285416,55283811,55281515,55277282,55276406,55275010,55274731,55273426,55272175,55270706,55270487,55269637,55267822,55267231,55262932,55261499,55259944,55256540	Gene ID= ENSG00000067248.9 TPM= 3.3 Transcript Type= NA
chr5	55256245	55307666	55256245	55307666	-	transcript1221.chr5.nnic@DHX29	transcript1221.chr5.nnic	protein_coding	55307387,55298591,55297285,55296220,55295379,55294017,55290218,55289270,55285696,55285293,55283203,55281372,55277106,55276266,55274866,55274614,55273293,55272087,55270578,55270412,55269413,55267686,55267138,55262630,55261368,55259848,55256245	55307666,55298664,55297398,55296349,55295524,55294145,55290344,55289428,55285861,55285416,55283811,55281515,55277282,55276406,55275010,55274731,55273377,55272175,55270706,55270505,55269637,55267822,55267231,55262932,55261499,55259944,55256540	Gene ID= ENSG00000067248.9 TPM= 2.72 Transcript Type= NA
chr5	55256245	55307722	55256245	55307722	-	ENST00000251636.9@DHX29	ENST00000251636.9	protein_coding	55307387,55298591,55297285,55296220,55295379,55294017,55290218,55289270,55285696,55285293,55283203,55281372,55277106,55276266,55274866,55274614,55273293,55272087,55270578,55270412,55269413,55267686,55267138,55262630,55261368,55259848,55256245	55307722,55298664,55297398,55296349,55295524,55294145,55290344,55289428,55285861,55285416,55283811,55281515,55277282,55276406,55275010,55274731,55273377,55272175,55270706,55270487,55269637,55267822,55267231,55262932,55261499,55259944,55256540	Gene ID= ENSG00000067248.9 TPM= 69.86 Transcript Type= protein_coding
chr5	55307760	55425581	55307760	55425581	+	ENST00000230640.9@SKIV2L2	ENST00000230640.9	protein_coding	55307760,55322327,55324132,55327716,55328699,55340010,55341681,55343331,55344522,55345094,55347013,55349573,55350919,55353168,55358573,55366725,55378314,55379127,55387974,55397416,55400233,55405425,55410524,55414182,55415970,55422878,55424720	55308147,55322464,55324198,55327778,55328811,55340184,55341771,55343455,55344620,55345196,55347144,55349652,55351029,55353269,55358698,55366875,55378486,55379195,55388102,55397526,55400421,55405588,55410629,55414238,55416132,55422982,55425581	Gene ID= ENSG00000039123.15 TPM= 12.84 Transcript Type= protein_coding
chr5	55307995	55310616	55307995	55310616	+	transcript1241.chr5.nnic@NA	transcript1241.chr5.nnic	NA	55307995	55310616	Gene ID= novel_gene_chr5_1242 TPM= 2.34 Transcript Type= NA
chr5	55345666	55346742	55345666	55346742	-	transcript1243.chr5.nnic@NA	transcript1243.chr5.nnic	NA	55345666	55346742	Gene ID= novel_gene_chr5_1244 TPM= 2.34 Transcript Type= NA
chr5	55420588	55423604	55420588	55423604	-	transcript1245.chr5.nnic@NA	transcript1245.chr5.nnic	NA	55420588	55423604	Gene ID= novel_gene_chr5_1246 TPM= 2.34 Transcript Type= NA
chr5	55424854	55535056	55424854	55535056	-	transcript1229.chr5.nic@PLPP1	transcript1229.chr5.nic	protein_coding	55534572,55490960,55475299,55467869,55441851,55425863,55424854	55535056,55491114,55475450,55468149,55441908,55426039,55425334	Gene ID= ENSG00000067113.16 TPM= 7.01 Transcript Type= NA
chr5	55424885	55535050	55424885	55535050	-	ENST00000307259.8@PLPP1	ENST00000307259.8	protein_coding	55534572,55475299,55467869,55441851,55425863,55424885	55535050,55475450,55468149,55441908,55426039,55425334	Gene ID= ENSG00000067113.16 TPM= 152.95 Transcript Type= protein_coding
chr5	55424854	55534969	55424854	55534969	-	ENST00000264775.9@PLPP1	ENST00000264775.9	protein_coding	55534572,55490960,55467869,55441851,55425863,55424854	55534969,55491114,55468149,55441908,55426039,55425334	Gene ID= ENSG00000067113.16 TPM= 12.84 Transcript Type= protein_coding
chr5	55621274	55623705	55621274	55623705	-	transcript1247.chr5.nnic@NA	transcript1247.chr5.nnic	NA	55621274	55623705	Gene ID= novel_gene_chr5_1248 TPM= 2.34 Transcript Type= NA
chr5	55625858	55712365	55625858	55712365	-	transcript1250.chr5.nic@SLC38A9	transcript1250.chr5.nic	protein_coding	55712217,55711452,55704322,55697846,55672563,55669758,55669557,55669228,55664693,55656715,55652529,55649207,55645789,55635544,55633754,55627891,55625858	55712365,55711499,55704434,55697992,55672695,55669879,55669620,55669321,55664863,55656774,55652723,55649314,55645895,55635657,55633902,55627980,55626659	Gene ID= ENSG00000177058.11 TPM= 3.5 Transcript Type= NA
chr5	55625845	55712726	55625845	55712726	-	ENST00000396865.6@SLC38A9	ENST00000396865.6	protein_coding	55712217,55711452,55697846,55672563,55669758,55669557,55669228,55664693,55656715,55652529,55649207,55645789,55635544,55633754,55627891,55625845	55712726,55711499,55697992,55672695,55669879,55669620,55669321,55664863,55656774,55652723,55649314,55645895,55635657,55633902,55627980,55626659	Gene ID= ENSG00000177058.11 TPM= 10.51 Transcript Type= protein_coding
chr5	55935095	55994993	55935095	55994993	-	ENST00000381298.6@IL6ST	ENST00000381298.6	protein_coding	55994784,55982724,55976215,55969550,55968276,55964146,55963352,55960402,55957209,55956025,55954810,55952250,55951929,55951464,55947493,55942670,55935095	55994993,55982811,55976293,55969855,55968396,55964312,55963506,55960561,55957291,55956235,55954992,55952351,55952075,55951604,55947589,55942751,55941819	Gene ID= ENSG00000134352.19 TPM= 29.19 Transcript Type= protein_coding
chr5	55974679	55975914	55974679	55975914	+	transcript1275.chr5.nnic@NA	transcript1275.chr5.nnic	NA	55974679	55975914	Gene ID= novel_gene_chr5_1276 TPM= 5.84 Transcript Type= NA
chr5	55982657	55989167	55982657	55989167	+	transcript1277.chr5.nnic@NA	transcript1277.chr5.nnic	NA	55982657	55989167	Gene ID= novel_gene_chr5_1278 TPM= 2.34 Transcript Type= NA
chr5	55994098	55994945	55994098	55994945	-	transcript1279.chr5.nnic@NA	transcript1279.chr5.nnic	NA	55994098	55994945	Gene ID= novel_gene_chr5_1280 TPM= 2.34 Transcript Type= NA
chr5	56815574	56896152	56815574	56896152	+	ENST00000399503.3@MAP3K1	ENST00000399503.3	protein_coding	56815574,56856600,56859715,56864734,56865340,56865829,56871910,56872641,56872825,56875032,56878980,56880711,56881083,56881570,56883527,56884664,56885932,56887378,56888226,56893531	56816055,56856750,56859915,56864934,56865456,56865977,56872031,56872722,56873005,56875310,56879101,56880802,56881272,56882866,56883679,56884826,56886063,56887520,56888357,56896152	Gene ID= ENSG00000095015.5 TPM= 17.51 Transcript Type= protein_coding
chr5	56909260	56917235	56909260	56917235	+	ENST00000285947.4@SETD9	ENST00000285947.4	protein_coding	56909260,56911169,56913011,56913874,56914861,56916815	56909743,56911536,56913134,56913989,56914966,56917235	Gene ID= ENSG00000155542.11 TPM= 1.17 Transcript Type= protein_coding
chr5	56919603	56952125	56919603	56952125	-	ENST00000381213.7@MIER3	ENST00000381213.7	protein_coding	56952094,56950628,56946926,56938883,56937578,56935666,56935428,56933247,56930664,56928767,56923915,56923691,56919603	56952125,56950652,56947071,56939017,56937698,56935751,56935500,56933398,56930745,56928858,56924042,56923833,56923585	Gene ID= ENSG00000155545.19 TPM= 4.67 Transcript Type= protein_coding
chr5	57174030	57263587	57174030	57263587	+	transcript1302.chr5.nic@GPBP1	transcript1302.chr5.nic	protein_coding	57174030,57175448,57214074,57221376,57230846,57231098,57235966,57246300,57247075,57249409,57250954,57261180,57262594	57174211,57176400,57214193,57221396,57230969,57231321,57236032,57246484,57247215,57249576,57251141,57261282,57263587	Gene ID= ENSG00000062194.15 TPM= 3.5 Transcript Type= NA
chr5	57173832	57263587	57173832	57263587	+	transcript1308.chr5.nnic@GPBP1	transcript1308.chr5.nnic	protein_coding	57173832,57175448,57214074,57230846,57231098,57235966,57246300,57247075,57249409,57250954,57261180,57262594	57173926,57176400,57214193,57230969,57231321,57236032,57246484,57247215,57249576,57251141,57261282,57263587	Gene ID= ENSG00000062194.15 TPM= 4.67 Transcript Type= NA
chr5	57174117	57263082	57174117	57263082	+	ENST00000506184.6@GPBP1	ENST00000506184.6	protein_coding	57174117,57175448,57214074,57230846,57231098,57235966,57246300,57247075,57249409,57250954,57261180,57262594	57174211,57176400,57214193,57230969,57231321,57236032,57246484,57247215,57249576,57251141,57261282,57263082	Gene ID= ENSG00000062194.15 TPM= 23.82 Transcript Type= protein_coding
chr5	57174049	57263587	57174049	57263587	+	ENST00000514387.6@GPBP1	ENST00000514387.6	protein_coding	57174049,57175448,57230846,57231098,57235966,57246300,57247075,57249409,57250954,57261180,57262594	57174211,57176400,57230969,57231321,57236032,57246484,57247215,57249576,57251141,57261282,57263587	Gene ID= ENSG00000062194.15 TPM= 3.5 Transcript Type= protein_coding
chr5	57480016	57482809	57480016	57482809	-	ENST00000423391.2@ACTBL2	ENST00000423391.2	protein_coding	57480016	57482809	Gene ID= ENSG00000169067.3 TPM= 1.17 Transcript Type= protein_coding
chr5	58453982	58460260	58453982	58460260	-	ENST00000274289.7@PLK2	ENST00000274289.7	protein_coding	58459690,58458985,58458725,58458399,58458084,58457488,58457181,58456945,58456492,58456026,58455539,58455285,58454911,58453982	58460260,58459092,58458841,58458528,58458171,58457583,58457379,58457092,58456589,58456155,58455779,58455414,58455021,58454774	Gene ID= ENSG00000145632.14 TPM= 75.89 Transcript Type= protein_coding
chr5	58458865	58460086	58458865	58460086	-	ENST00000504196.1@PLK2	ENST00000504196.1	protein_coding	58459690,58458865	58460086,58459092	Gene ID= ENSG00000145632.14 TPM= 1.17 Transcript Type= retained_intron
chr5	59027687	59029268	59027687	59029268	+	transcript1338.chr5.nnic@NA	transcript1338.chr5.nnic	NA	59027687	59029268	Gene ID= novel_gene_chr5_1339 TPM= 2.34 Transcript Type= NA
chr5	60280793	60285784	60280793	60285784	+	transcript1340.chr5.nnic@NA	transcript1340.chr5.nnic	NA	60280793	60285784	Gene ID= novel_gene_chr5_1341 TPM= 3.5 Transcript Type= NA
chr5	60751791	60844267	60751791	60844267	-	transcript1343.chr5.nic@ELOVL7	transcript1343.chr5.nic	protein_coding	60844160,60802627,60799180,60787334,60771903,60767823,60766574,60764227,60757509,60751791	60844267,60802665,60799230,60787431,60772093,60767903,60766630,60764332,60757645,60754833	Gene ID= ENSG00000164181.13 TPM= 6.62 Transcript Type= NA
chr5	60751791	60844389	60751791	60844389	-	ENST00000508821.5@ELOVL7	ENST00000508821.5	protein_coding	60844160,60799180,60787334,60771903,60767823,60766574,60764227,60757509,60751791	60844389,60799230,60787431,60772093,60767903,60766630,60764332,60757645,60754833	Gene ID= ENSG00000164181.13 TPM= 13.63 Transcript Type= protein_coding
chr5	60751792	60844274	60751792	60844274	-	ENST00000425382.5@ELOVL7	ENST00000425382.5	protein_coding	60844160,60787334,60771903,60767823,60766574,60764227,60757509,60751792	60844274,60787431,60772093,60767903,60766630,60764332,60757645,60754833	Gene ID= ENSG00000164181.13 TPM= 3.12 Transcript Type= protein_coding
chr5	60866289	60870510	60866289	60870510	+	transcript1348.chr5.nnic@NA	transcript1348.chr5.nnic	NA	60866289	60870510	Gene ID= novel_gene_chr5_1349 TPM= 4.67 Transcript Type= NA
chr5	60873832	60945051	60873832	60945051	-	ENST00000265038.9@ERCC8	ENST00000265038.9	protein_coding	60944932,60928864,60922054,60918265,60904792,60903648,60902442,60899627,60898276,60890889,60887440,60873832	60945051,60928959,60922155,60918388,60904873,60903716,60902508,60899727,60898400,60891086,60887520,60874683	Gene ID= ENSG00000049167.13 TPM= 4.67 Transcript Type= protein_coding
chr5	60945129	61153037	60945129	61153037	+	ENST00000296597.9@NDUFAF2	ENST00000296597.9	protein_coding	60945129,61073125,61098992,61152704	60945382,61073214,61099032,61153037	Gene ID= ENSG00000164182.10 TPM= 30.36 Transcript Type= protein_coding
chr5	60945148	61153026	60945148	61153026	+	transcript1359.chr5.nnic@NDUFAF2	transcript1359.chr5.nnic	protein_coding	60945148,61073125,61098992,61152704	60945428,61073214,61099032,61153026	Gene ID= ENSG00000164182.10 TPM= 5.84 Transcript Type= NA
chr5	60945207	61153026	60945207	61153026	+	ENST00000511107.1@NDUFAF2	ENST00000511107.1	protein_coding	60945207,61098992,61152704	60945428,61099032,61153026	Gene ID= ENSG00000164182.10 TPM= 1.17 Transcript Type= protein_coding
chr5	61157709	61162474	61157709	61162474	-	ENST00000339020.7@SMIM15	ENST00000339020.7	protein_coding	61162217,61161088,61157709	61162474,61161227,61160199	Gene ID= ENSG00000188725.7 TPM= 82.9 Transcript Type= protein_coding
chr5	61158602	61162468	61158602	61162468	-	transcript1364.chr5.nnic@SMIM15	transcript1364.chr5.nnic	protein_coding	61162446,61161088,61158602	61162468,61161227,61160199	Gene ID= ENSG00000188725.7 TPM= 4.67 Transcript Type= NA
chr5	61424729	61428612	61424729	61428612	-	transcript1367.chr5.nnic@NA	transcript1367.chr5.nnic	NA	61424729	61428612	Gene ID= novel_gene_chr5_1368 TPM= 3.5 Transcript Type= NA
chr5	62306230	62388741	62306230	62388741	+	transcript1371.chr5.nic@KIF2A	transcript1371.chr5.nic	protein_coding	62306230,62347130,62348048,62350066,62352588,62353275,62355159,62357691,62358137,62361242,62361466,62362450,62363178,62363695,62365243,62366414,62373687,62377661,62381118,62385484	62306536,62347224,62348167,62350120,62352653,62353375,62355254,62357745,62358299,62361332,62361529,62362541,62363320,62363899,62365353,62366481,62373837,62377762,62381253,62388741	Gene ID= ENSG00000068796.16 TPM= 2.34 Transcript Type= NA
chr5	62387254	62403933	62387254	62403933	-	ENST00000199320.8@DIMT1	ENST00000199320.8	protein_coding	62403694,62403273,62402036,62398820,62398646,62398511,62394484,62393955,62392926,62392171,62390876,62387254	62403933,62403346,62402122,62398881,62398739,62398560,62394607,62394047,62392990,62392234,62390982,62389052	Gene ID= ENSG00000086189.9 TPM= 2.34 Transcript Type= protein_coding
chr5	62412763	62628577	62412763	62628577	+	transcript1385.chr5.nnic@IPO11	transcript1385.chr5.nnic	protein_coding	62412763,62437274,62442983,62449927,62451730,62467131,62470250,62474416,62476683,62483101,62484010,62485419,62487771,62489302,62490115,62493998,62504667,62504858,62506241,62515388,62526142,62530709,62533232,62536702,62537209,62550367,62551223,62561136,62591577,62601764,62627154	62412929,62437417,62443083,62449999,62451933,62467263,62470308,62474464,62476753,62483293,62484162,62485462,62487861,62489349,62490220,62494124,62504700,62504898,62506357,62515501,62526257,62530785,62533354,62536781,62537289,62550462,62551336,62561257,62591672,62601848,62628577	Gene ID= ENSG00000086200.16 TPM= 2.34 Transcript Type= NA
chr5	62412767	62628577	62412767	62628577	+	ENST00000325324.10@IPO11	ENST00000325324.10	protein_coding	62412767,62437274,62442983,62449927,62451730,62467131,62470250,62474416,62476683,62483101,62484010,62485419,62487771,62489302,62490115,62493998,62504667,62504858,62506241,62515388,62526142,62530709,62536702,62537209,62550367,62551223,62561136,62591577,62601764,62627154	62412929,62437417,62443083,62449999,62451933,62467263,62470308,62474464,62476753,62483293,62484162,62485462,62487861,62489349,62490220,62494124,62504700,62504898,62506357,62515501,62526257,62530785,62536781,62537289,62550462,62551336,62561257,62591672,62601848,62628577	Gene ID= ENSG00000086200.16 TPM= 18.68 Transcript Type= protein_coding
chr5	62578821	62628582	62578821	62628582	+	ENST00000409534.1@IPO11	ENST00000409534.1	protein_coding	62578821,62591577,62601764,62627154	62578935,62591672,62601848,62628582	Gene ID= ENSG00000086200.16 TPM= 3.5 Transcript Type= protein_coding
chr5	62578735	62581448	62578735	62581448	+	ENST00000334994.5@LRRC70	ENST00000334994.5	protein_coding	62578735,62579401	62578935,62581448	Gene ID= ENSG00000186105.7 TPM= 1.17 Transcript Type= protein_coding
chr5	62578837	62581442	62578837	62581442	+	ENST00000448151.2@LRRC70	ENST00000448151.2	protein_coding	62578837,62579401,62580454	62578935,62579483,62581442	Gene ID= ENSG00000186105.7 TPM= 1.17 Transcript Type= processed_transcript
chr5	64165706	64372558	64165706	64372558	+	transcript1400.chr5.nnic@RNF180	transcript1400.chr5.nnic	protein_coding	64165706,64212065,64213558,64217361,64325186,64330281,64369615	64165953,64212160,64214517,64217396,64325411,64330406,64372558	Gene ID= ENSG00000164197.11 TPM= 4.67 Transcript Type= NA
chr5	64718144	64768685	64718144	64768685	-	ENST00000513458.8@SREK1IP1	ENST00000513458.8	protein_coding	64768505,64754315,64741057,64728107,64718144	64768685,64754362,64741200,64728179,64724573	Gene ID= ENSG00000153006.15 TPM= 11.68 Transcript Type= protein_coding
chr5	64768930	65018763	64768930	65018763	+	ENST00000381070.7@CWC27	ENST00000381070.7	protein_coding	64768930,64774691,64781921,64783836,64785481,64786524,64788951,64800248,64801302,64804229,64885443,64971703,64977135,65018159	64769188,64774787,64782033,64783979,64785579,64786627,64789020,64800327,64801332,64804386,64885546,64971812,64977238,65018763	Gene ID= ENSG00000153015.15 TPM= 4.67 Transcript Type= protein_coding
chr5	65563285	65587549	65563285	65587549	+	transcript1429.chr5.nic@PPWD1	transcript1429.chr5.nic	protein_coding	65563285,65567513,65569878,65571839,65576879,65579424,65583038,65585014,65585999,65587253	65563506,65569732,65569998,65572286,65577069,65579613,65583219,65585095,65586181,65587549	Gene ID= ENSG00000113593.11 TPM= 15.18 Transcript Type= NA
chr5	65563239	65587549	65563239	65587549	+	ENST00000261308.9@PPWD1	ENST00000261308.9	protein_coding	65563239,65567513,65569632,65569878,65571839,65576879,65579424,65583038,65585014,65585999,65587253	65563506,65567615,65569732,65569998,65572286,65577069,65579613,65583219,65585095,65586181,65587549	Gene ID= ENSG00000113593.11 TPM= 31.53 Transcript Type= protein_coding
chr5	65589680	65624646	65589680	65624646	-	ENST00000231524.13@TRIM23	ENST00000231524.13	protein_coding	65624194,65618093,65614098,65611603,65610861,65609243,65604911,65597051,65596421,65594521,65589680	65624646,65618255,65614219,65611881,65611043,65609458,65605045,65597180,65596531,65594645,65591948	Gene ID= ENSG00000113595.14 TPM= 4.67 Transcript Type= protein_coding
chr5	65625034	65664764	65625034	65664764	+	ENST00000438419.6@TRAPPC13	ENST00000438419.6	protein_coding	65625034,65635301,65635944,65637696,65647055,65650810,65652501,65655636,65658368,65660699,65662050,65664234,65664504	65625106,65635369,65636043,65637780,65647182,65650882,65652545,65655653,65658501,65660897,65662150,65664384,65664764	Gene ID= ENSG00000113597.17 TPM= 3.5 Transcript Type= protein_coding
chr5	65625040	65666069	65625040	65666069	+	ENST00000231526.8@TRAPPC13	ENST00000231526.8	protein_coding	65625040,65635301,65635944,65637696,65647055,65650810,65652501,65658368,65660699,65662050,65664237,65664504	65625106,65635369,65636043,65637780,65647182,65650882,65652545,65658501,65660897,65662150,65664384,65666069	Gene ID= ENSG00000113597.17 TPM= 5.84 Transcript Type= protein_coding
chr5	65624765	65630891	65624765	65630891	+	ENST00000510585.2@AC008560.1	ENST00000510585.2	protein_coding	65624765,65629468	65625106,65630891	Gene ID= ENSG00000253251.2 TPM= 1.17 Transcript Type= protein_coding
chr5	65666234	65722135	65666234	65722135	-	transcript1444.chr5.nnic@SGTB	transcript1444.chr5.nnic	protein_coding	65721917,65720708,65712961,65708489,65704279,65685368,65680656,65680494,65672244,65671915,65668775,65666234	65722135,65720829,65713064,65708558,65704378,65685472,65680794,65680556,65672281,65671998,65670357,65667998	Gene ID= ENSG00000197860.9 TPM= 2.34 Transcript Type= NA
chr5	65926556	66080516	65926556	66080516	+	ENST00000380943.6@ERBIN	ENST00000380943.6	protein_coding	65926556,65988635,65992710,65994747,66012049,66013549,66014669,66021322,66023290,66024306,66025480,66025848,66026302,66028274,66038383,66043077,66044137,66046353,66048667,66050783,66053406,66075024,66076316,66076875,66078423	65926806,65988682,65992907,65994864,66012127,66013638,66014725,66021385,66023364,66024450,66025552,66025977,66026417,66028343,66038482,66043198,66044310,66046538,66048781,66050966,66054951,66075230,66076408,66076949,66080516	Gene ID= ENSG00000112851.14 TPM= 26.85 Transcript Type= protein_coding
chr5	66144186	66175041	66144186	66175041	+	transcript1486.chr5.nic@SREK1	transcript1486.chr5.nic	protein_coding	66144186,66153463,66159219,66162109,66162414,66163792,66164783,66170051,66170585,66174946	66144537,66153596,66159334,66162273,66162592,66163922,66164897,66170170,66170947,66175041	Gene ID= ENSG00000153914.15 TPM= 4.67 Transcript Type= NA
chr5	66596380	66986523	66596380	66986523	+	ENST00000406374.5@MAST4	ENST00000406374.5	protein_coding	66596380,66759709,66788670,66899951,66916983,66986444	66597018,66759862,66788794,66899982,66917018,66986523	Gene ID= ENSG00000069020.18 TPM= 1.17 Transcript Type= protein_coding
chr5	67099814	67104325	67099814	67104325	-	transcript1504.chr5.nnic@NA	transcript1504.chr5.nnic	NA	67099814	67104325	Gene ID= novel_gene_chr5_1505 TPM= 2.34 Transcript Type= NA
chr5	67456828	67460657	67456828	67460657	+	transcript1507.chr5.nnic@NA	transcript1507.chr5.nnic	NA	67456828	67460657	Gene ID= novel_gene_chr5_1508 TPM= 26.85 Transcript Type= NA
chr5	67464783	67490768	67464783	67490768	-	transcript1509.chr5.nnic@AC079467.1	transcript1509.chr5.nnic	processed_transcript	67490580,67467906,67466873,67464783	67490768,67468053,67466938,67465327	Gene ID= ENSG00000250978.5 TPM= 4.67 Transcript Type= NA
chr5	67465035	67475592	67465035	67475592	-	ENST00000515184.1@AC079467.1	ENST00000515184.1	processed_transcript	67475415,67467906,67466873,67465035	67475592,67468053,67466938,67465327	Gene ID= ENSG00000250978.5 TPM= 1.17 Transcript Type= retained_intron
chr5	67484562	67486978	67484562	67486978	+	transcript1512.chr5.nnic@NA	transcript1512.chr5.nnic	NA	67484562	67486978	Gene ID= novel_gene_chr5_1513 TPM= 3.5 Transcript Type= NA
chr5	67636382	67638942	67636382	67638942	+	ENST00000506012.1@BCL9P1	ENST00000506012.1	processed_pseudogene	67636382	67638942	Gene ID= ENSG00000249238.1 TPM= 2.34 Transcript Type= processed_pseudogene
chr5	68215776	68298753	68215776	68298753	+	ENST00000521657.5@PIK3R1	ENST00000521657.5	protein_coding	68215776,68226290,68273390,68273939,68279602,68280528,68280927,68292259,68293101,68293303,68293709,68294536,68295148,68295420,68296171,68297412	68215953,68227009,68273482,68274013,68279733,68280729,68281006,68292361,68293199,68293483,68293834,68294678,68295324,68295488,68296341,68298753	Gene ID= ENSG00000145675.14 TPM= 37.36 Transcript Type= protein_coding
chr5	69093646	69131069	69093646	69131069	+	ENST00000396591.7@SLC30A5	ENST00000396591.7	protein_coding	69093646,69100807,69103062,69104631,69108349,69113140,69114420,69115237,69115926,69116394,69117239,69118499,69121694,69123199,69128004,69129447	69094338,69100929,69103128,69104716,69108436,69113227,69114496,69115407,69116214,69116602,69117396,69118628,69121895,69123425,69128132,69131069	Gene ID= ENSG00000145740.18 TPM= 47.58 Transcript Type= protein_coding
chr5	69094029	69131069	69094029	69131069	+	transcript1542.chr5.nic@SLC30A5	transcript1542.chr5.nic	protein_coding	69094029,69100807,69103062,69104631,69108349,69113140,69114420,69115237,69115926,69116394,69117239,69118499,69121694,69123199,69129447	69094338,69100929,69103128,69104716,69108436,69113227,69114496,69115407,69116214,69116602,69117396,69118628,69121895,69123425,69131069	Gene ID= ENSG00000145740.18 TPM= 3.79 Transcript Type= NA
chr5	69093991	69104740	69093991	69104740	+	ENST00000380860.8@SLC30A5	ENST00000380860.8	protein_coding	69093991,69100807,69103062,69103962	69094338,69100929,69103128,69104740	Gene ID= ENSG00000145740.18 TPM= 10.51 Transcript Type= protein_coding
chr5	69167010	69178245	69167010	69178245	+	ENST00000256442.9@CCNB1	ENST00000256442.9	protein_coding	69167010,69167908,69168173,69171270,69174251,69174877,69175397,69177239,69177524	69167283,69168078,69168343,69171452,69174409,69175113,69175537,69177349,69178245	Gene ID= ENSG00000134057.14 TPM= 5.84 Transcript Type= protein_coding
chr5	69189548	69210357	69189548	69210357	+	ENST00000283006.6@CENPH	ENST00000283006.6	protein_coding	69189548,69191795,69194647,69195717,69197053,69202506,69202919,69208196,69209707	69189768,69191850,69194695,69195791,69197109,69202569,69202970,69208359,69210357	Gene ID= ENSG00000153044.9 TPM= 4.67 Transcript Type= protein_coding
chr5	69217832	69229875	69217832	69229875	+	ENST00000602380.1@MRPS36	ENST00000602380.1	protein_coding	69217832,69226338,69228200,69229208	69218111,69226401,69228387,69229875	Gene ID= ENSG00000134056.11 TPM= 1.17 Transcript Type= protein_coding
chr5	69217760	69230129	69217760	69230129	+	ENST00000256441.4@MRPS36	ENST00000256441.4	protein_coding	69217760,69226338,69228200,69229208	69217871,69226401,69228387,69230129	Gene ID= ENSG00000134056.11 TPM= 8.17 Transcript Type= protein_coding
chr5	69234873	69277430	69234873	69277430	+	ENST00000256443.7@CDK7	ENST00000256443.7	protein_coding	69234873,69235394,69252418,69254602,69255460,69258043,69259818,69262205,69269207,69272892,69276543,69277107	69235041,69235453,69252451,69254669,69255528,69258153,69259936,69262304,69269293,69273041,69276690,69277430	Gene ID= ENSG00000134058.11 TPM= 1.17 Transcript Type= protein_coding
chr5	69350984	69369542	69350984	69369542	-	ENST00000380822.8@AK6	ENST00000380822.8	protein_coding	69369463,69366503,69355895,69355649,69350984	69369542,69366595,69355953,69355794,69352253	Gene ID= ENSG00000085231.13 TPM= 19.85 Transcript Type= protein_coding
chr5	69351726	69370013	69351726	69370013	-	ENST00000380818.7@AK6	ENST00000380818.7	protein_coding	69369657,69366503,69355895,69355649,69351726	69370013,69366595,69355953,69355794,69352253	Gene ID= ENSG00000085231.13 TPM= 2.34 Transcript Type= protein_coding
chr5	69364745	69369642	69364745	69369642	-	ENST00000217893.9@TAF9	ENST00000217893.9	protein_coding	69369463,69366503,69364745	69369642,69366595,69365754	Gene ID= ENSG00000273841.4 TPM= 25.69 Transcript Type= protein_coding
chr5	69369812	69414801	69369812	69414801	+	ENST00000354868.9@RAD17	ENST00000354868.9	protein_coding	69369812,69371035,69371454,69372034,69373830,69374628,69381901,69384797,69386043,69386180,69386396,69389034,69391831,69393155,69393354,69396397,69400049,69410493,69414031	69369933,69371171,69371557,69372217,69374087,69374711,69382057,69384933,69386095,69386305,69386465,69389145,69392013,69393240,69393500,69396546,69400169,69410550,69414801	Gene ID= ENSG00000152942.18 TPM= 1.75 Transcript Type= protein_coding
chr5	69369825	69414801	69369825	69414801	+	ENST00000354312.7@RAD17	ENST00000354312.7	protein_coding	69369825,69371035,69372034,69373830,69374628,69381901,69384797,69386043,69386180,69386396,69389034,69391831,69393155,69393354,69396397,69400049,69410493,69414031	69369933,69371171,69372217,69374087,69374711,69382057,69384933,69386095,69386305,69386465,69389145,69392013,69393240,69393500,69396546,69400169,69410550,69414801	Gene ID= ENSG00000152942.18 TPM= 11.09 Transcript Type= protein_coding
chr5	69415204	69444212	69415204	69444212	+	transcript1609.chr5.nic@MARVELD2	transcript1609.chr5.nic	protein_coding	69415204,69419371,69424601,69432527,69432922,69440450,69441532	69415724,69420531,69424636,69432675,69433093,69440500,69444212	Gene ID= ENSG00000152939.14 TPM= 9.14 Transcript Type= NA
chr5	69415087	69440496	69415087	69440496	+	transcript1610.chr5.nic@MARVELD2	transcript1610.chr5.nic	protein_coding	69415087,69419371,69424601,69432527,69432922,69440450	69415170,69420531,69424636,69432675,69433093,69440496	Gene ID= ENSG00000152939.14 TPM= 3.5 Transcript Type= NA
chr5	69415204	69444212	69415204	69444212	+	transcript1611.chr5.nic@MARVELD2	transcript1611.chr5.nic	protein_coding	69415204,69419371,69432527,69432922,69440450,69441532	69415724,69420531,69432675,69433093,69440500,69444212	Gene ID= ENSG00000152939.14 TPM= 5.64 Transcript Type= NA
chr5	69415112	69442056	69415112	69442056	+	ENST00000325631.9@MARVELD2	ENST00000325631.9	protein_coding	69415112,69419371,69424601,69432527,69432922,69440450,69441532	69415170,69420531,69424636,69432675,69433093,69440500,69442056	Gene ID= ENSG00000152939.14 TPM= 2.34 Transcript Type= protein_coding
chr5	69492292	69558104	69492292	69558104	+	ENST00000355237.6@OCLN	ENST00000355237.6	protein_coding	69492292,69504177,69509141,69513948,69534694,69544904,69547930,69551544,69553570	69492659,69504294,69509819,69514109,69534839,69545119,69548101,69551585,69558104	Gene ID= ENSG00000197822.10 TPM= 23.35 Transcript Type= protein_coding
chr5	69560057	69592525	69560057	69592525	+	transcript1616.chr5.nic@GTF2H2C	transcript1616.chr5.nic	protein_coding	69560057,69562673,69565100,69566131,69566589,69566967,69567727,69568153,69572445,69578712,69579021,69579757,69582366,69585594,69586254,69590328,69592079	69560242,69562770,69565188,69566208,69566625,69567053,69567777,69568207,69572550,69578802,69579108,69579864,69582429,69585697,69586356,69590367,69592525	Gene ID= ENSG00000183474.15 TPM= 4.38 Transcript Type= NA
chr5	69558392	69592913	69558392	69592913	+	transcript1619.chr5.nic@GTF2H2C	transcript1619.chr5.nic	protein_coding	69558392,69565100,69566131,69566589,69566967,69567727,69568153,69572445,69578712,69579021,69579757,69582366,69585594,69586254,69590328,69592079	69560242,69565188,69566208,69566625,69567053,69567777,69568207,69572550,69578802,69579108,69579864,69582429,69585697,69586356,69590367,69592913	Gene ID= ENSG00000183474.15 TPM= 3.21 Transcript Type= NA
chr5	69560208	69572844	69560208	69572844	+	ENST00000512736.5@GTF2H2C	ENST00000512736.5	protein_coding	69560208,69565100,69566131,69566589,69566967,69567727,69568153,69572445	69560242,69565188,69566208,69566625,69567053,69567777,69568207,69572844	Gene ID= ENSG00000183474.15 TPM= 1.17 Transcript Type= protein_coding
chr5	69560247	69592525	69560247	69592525	+	ENST00000380729.7@GTF2H2C	ENST00000380729.7	protein_coding	69560247,69562673,69565100,69566131,69566589,69566967,69567727,69568153,69572445,69578712,69579021,69579757,69582366,69585594,69586254,69590328,69592079	69560403,69562770,69565188,69566208,69566625,69567053,69567777,69568207,69572550,69578802,69579108,69579864,69582429,69585697,69586356,69590367,69592525	Gene ID= ENSG00000183474.15 TPM= 2.04 Transcript Type= protein_coding
chr5	69625358	69627105	69625358	69627105	-	transcript1650.chr5.nnic@NA	transcript1650.chr5.nnic	NA	69625358	69627105	Gene ID= novel_gene_chr5_1651 TPM= 8.17 Transcript Type= NA
chr5	69634290	69636478	69634290	69636478	+	transcript1646.chr5.nnic@NA	transcript1646.chr5.nnic	NA	69634290	69636478	Gene ID= novel_gene_chr5_1647 TPM= 2.34 Transcript Type= NA
chr5	70025247	70032696	70025247	70032696	+	ENST00000380751.9@SERF1B	ENST00000380751.9	protein_coding	70025247,70026407,70032315	70025458,70026515,70032696	Gene ID= ENSG00000205572.9 TPM= 18.68 Transcript Type= protein_coding
chr5	70049612	70077592	70049612	70077592	+	ENST00000380743.8@SMN2	ENST00000380743.8	protein_coding	70049612,70063415,70065965,70066934,70067294,70069235,70070641,70076521,70077019	70049766,70063486,70066084,70067134,70067446,70069330,70070751,70076574,70077592	Gene ID= ENSG00000205571.13 TPM= 11.97 Transcript Type= protein_coding
chr5	70049629	70077592	70049629	70077592	+	transcript1663.chr5.nic@SMN2	transcript1663.chr5.nic	protein_coding	70049629,70063415,70065965,70066934,70067294,70070641,70077019	70049766,70063486,70066084,70067134,70067446,70070751,70077592	Gene ID= ENSG00000205571.13 TPM= 2.63 Transcript Type= NA
chr5	70049654	70077592	70049654	70077592	+	ENST00000626847.2@SMN2	ENST00000626847.2	protein_coding	70049654,70063415,70065965,70066934,70067294,70069235,70070641,70077019	70049766,70063486,70066084,70067134,70067446,70069330,70070751,70077592	Gene ID= ENSG00000205571.13 TPM= 7.3 Transcript Type= protein_coding
chr5	70049657	70077596	70049657	70077596	+	ENST00000506734.5@SMN2	ENST00000506734.5	protein_coding	70049657,70063415,70065965,70066934,70067294,70069235,70070641,70071282,70077019	70049766,70063486,70066084,70067134,70067446,70069330,70070751,70071390,70077596	Gene ID= ENSG00000205571.13 TPM= 1.46 Transcript Type= nonsense_mediated_decay
chr5	70075485	70077588	70075485	70077588	+	transcript1672.chr5.nnic@NA	transcript1672.chr5.nnic	NA	70075485	70077588	Gene ID= novel_gene_chr5_1673 TPM= 2.34 Transcript Type= NA
chr5	70481016	70585807	70481016	70585807	-	transcript1682.chr5.nnic@AC146944.1	transcript1682.chr5.nnic	unprocessed_pseudogene	70585619,70556840,70555218,70522001,70518321,70516308,70481016	70585807,70556873,70555373,70522188,70518405,70516482,70481538	Gene ID= ENSG00000196302.5 TPM= 2.34 Transcript Type= NA
chr5	70900687	70918530	70900687	70918530	+	ENST00000354833.7@SERF1A	ENST00000354833.7	protein_coding	70900687,70901825,70916941	70900876,70901933,70918530	Gene ID= ENSG00000172058.15 TPM= 4.67 Transcript Type= protein_coding
chr5	70925030	70953012	70925030	70953012	+	ENST00000380707.8@SMN1	ENST00000380707.8	protein_coding	70925030,70938839,70941389,70942358,70942718,70944658,70946066,70951941,70952439	70925184,70938910,70941508,70942558,70942870,70944753,70946176,70951994,70953012	Gene ID= ENSG00000172062.16 TPM= 21.02 Transcript Type= protein_coding
chr5	71035329	71067686	71035329	71067686	-	transcript1691.chr5.nic@GTF2H2	transcript1691.chr5.nic	protein_coding	71067655,71062708,71061688,71061272,71060844,71060120,71059690,71055352,71049068,71048762,71048006,71045444,71042181,71041522,71037507,71035329	71067686,71062796,71061765,71061308,71060930,71060170,71059744,71055457,71049158,71048849,71048113,71045507,71042284,71041624,71037546,71035796	Gene ID= ENSG00000145736.14 TPM= 5.84 Transcript Type= NA
chr5	71455615	71567820	71455615	71567820	+	ENST00000358731.8@BDP1	ENST00000358731.8	protein_coding	71455615,71458579,71461817,71464058,71466096,71467354,71470395,71483842,71486484,71489404,71490984,71495250,71497270,71501562,71502599,71504621,71509465,71512241,71513185,71514944,71516061,71517322,71522289,71522756,71523939,71532308,71539042,71539557,71541454,71542105,71544357,71545039,71548682,71549420,71553116,71556886,71559982,71562274,71564754	71456089,71458855,71461926,71464117,71466221,71467487,71470489,71483896,71486627,71489682,71491131,71495408,71497426,71501653,71502791,71504751,71511151,71512428,71513407,71515122,71516271,71517452,71522490,71522949,71524323,71532427,71539078,71539649,71541682,71542265,71544507,71545219,71548745,71549606,71553320,71556925,71560237,71562520,71567820	Gene ID= ENSG00000145734.18 TPM= 4.67 Transcript Type= protein_coding
chr5	71587282	71658704	71587282	71658704	+	transcript1720.chr5.nic@MCCC2	transcript1720.chr5.nic	protein_coding	71587282,71592926,71596280,71599659,71602506,71604356,71632121,71634943,71635151,71641003,71643819,71646211,71649097,71650069,71652669,71656743	71587554,71592992,71596364,71599760,71602633,71604468,71632185,71635042,71635246,71641075,71643895,71646277,71649253,71650183,71652754,71658704	Gene ID= ENSG00000131844.15 TPM= 2.34 Transcript Type= NA
chr5	71640383	71657404	71640383	71657404	+	transcript1721.chr5.nic@MCCC2	transcript1721.chr5.nic	protein_coding	71640383,71646211,71649097,71650069,71652669,71656743	71643895,71646277,71649253,71650183,71652754,71657404	Gene ID= ENSG00000131844.15 TPM= 8.17 Transcript Type= NA
chr5	71587297	71658704	71587297	71658704	+	ENST00000340941.10@MCCC2	ENST00000340941.10	protein_coding	71587297,71592926,71596280,71599659,71602506,71604356,71626640,71632121,71634943,71635151,71641003,71643819,71646211,71649097,71650069,71652669,71656743	71587554,71592992,71596364,71599760,71602633,71604468,71626753,71632185,71635042,71635246,71641075,71643895,71646277,71649253,71650183,71652754,71658704	Gene ID= ENSG00000131844.15 TPM= 19.85 Transcript Type= protein_coding
chr5	72107234	72209570	72107234	72209570	+	ENST00000296755.11@MAP1B	ENST00000296755.11	protein_coding	72107234,72115698,72183743,72186614,72193866,72203563,72205084	72107715,72115799,72183825,72186754,72200367,72203801,72209570	Gene ID= ENSG00000131711.14 TPM= 23.35 Transcript Type= protein_coding
chr5	72219409	72320261	72219409	72320261	-	ENST00000261413.9@MRPS27	ENST00000261413.9	protein_coding	72320149,72314081,72297632,72295531,72238014,72234119,72232443,72228266,72226057,72223683,72219409	72320261,72314158,72297702,72295589,72238128,72234197,72232558,72228368,72226199,72223850,72221148	Gene ID= ENSG00000113048.16 TPM= 5.84 Transcript Type= protein_coding
chr5	72219528	72320255	72219528	72320255	-	ENST00000457646.8@MRPS27	ENST00000457646.8	protein_coding	72320181,72314081,72297632,72295531,72238014,72234119,72232443,72228266,72226057,72223683,72219528	72320255,72314158,72297702,72295589,72238128,72234197,72232558,72228368,72226199,72223850,72221148	Gene ID= ENSG00000113048.16 TPM= 2.34 Transcript Type= protein_coding
chr5	72320367	72368395	72320367	72368395	+	ENST00000380639.9@PTCD2	ENST00000380639.9	protein_coding	72320367,72322172,72326612,72331258,72335018,72335794,72338622,72342962,72352641,72358203	72320509,72322264,72326741,72331375,72335096,72335885,72338735,72343036,72352754,72368395	Gene ID= ENSG00000049883.14 TPM= 2.34 Transcript Type= protein_coding
chr5	72442652	72507427	72442652	72507427	-	transcript1744.chr5.nic@ZNF366	transcript1744.chr5.nic	protein_coding	72507251,72461330,72460165,72456404,72447243,72442652	72507427,72461510,72461142,72456595,72447417,72444291	Gene ID= ENSG00000178175.11 TPM= 6.42 Transcript Type= NA
chr5	72442652	72507727	72442652	72507727	-	ENST00000318442.5@ZNF366	ENST00000318442.5	protein_coding	72507251,72460165,72456404,72447243,72442652	72507727,72461510,72456595,72447417,72444291	Gene ID= ENSG00000178175.11 TPM= 35.61 Transcript Type= protein_coding
chr5	72816312	72916733	72816312	72916733	+	ENST00000337273.9@TNPO1	ENST00000337273.9	protein_coding	72816312,72848385,72851244,72855774,72861808,72865596,72872639,72875615,72877228,72882467,72883064,72887070,72888078,72889786,72891810,72893139,72893377,72893616,72896458,72897056,72900006,72900974,72903709,72905303,72908709	72816752,72848498,72851319,72855923,72861914,72865729,72872720,72875737,72877346,72882527,72883232,72887222,72888303,72889957,72891896,72893246,72893535,72893703,72896556,72897151,72900081,72901073,72903783,72905445,72916733	Gene ID= ENSG00000083312.17 TPM= 9.34 Transcript Type= protein_coding
chr5	72848097	72905580	72848097	72905580	+	transcript1761.chr5.nic@TNPO1	transcript1761.chr5.nic	protein_coding	72848097,72848385,72851244,72855774,72861808,72865596,72872639,72875615,72877228,72882467,72883064,72887070,72888078,72889786,72891810,72893139,72893377,72893616,72896458,72897056,72900006,72900974,72903709,72905303	72848251,72848498,72851319,72855923,72861914,72865729,72872720,72875737,72877346,72882527,72883232,72887222,72888303,72889957,72891896,72893246,72893535,72893703,72896556,72897151,72900081,72901073,72903783,72905580	Gene ID= ENSG00000083312.17 TPM= 2.34 Transcript Type= NA
chr5	72848184	72908951	72848184	72908951	+	ENST00000506351.6@TNPO1	ENST00000506351.6	protein_coding	72848184,72848385,72851244,72855774,72861808,72865596,72872639,72875615,72877228,72882467,72883064,72887070,72888078,72889786,72891810,72893139,72893377,72893616,72896458,72897056,72900006,72900974,72903709,72905303,72908709	72848251,72848498,72851319,72855923,72861914,72865729,72872720,72875737,72877346,72882527,72883232,72887222,72888303,72889957,72891896,72893246,72893535,72893703,72896556,72897151,72900081,72901073,72903783,72905445,72908951	Gene ID= ENSG00000083312.17 TPM= 9.34 Transcript Type= protein_coding
chr5	72955997	73010902	72955997	73010902	+	transcript1778.chr5.nic@FCHO2	transcript1778.chr5.nic	protein_coding	72955997,72968498,72989427,72990478,72990712,73006445	72956129,72968589,72989501,72990619,72990864,73010902	Gene ID= ENSG00000157107.13 TPM= 7.01 Transcript Type= NA
chr5	72955981	73090522	72955981	73090522	+	ENST00000430046.6@FCHO2	ENST00000430046.6	protein_coding	72955981,72968498,72989427,72990478,72990712,73006445,73015626,73017212,73034657,73037143,73041291,73051349,73052332,73054160,73054525,73056065,73058433,73063841,73068650,73074742,73077338,73078180,73081783,73082761,73087589,73088068	72956129,72968589,72989501,72990619,72990864,73006549,73015724,73017308,73034701,73037215,73041315,73051406,73052507,73054171,73054549,73056107,73058524,73063944,73068779,73074853,73077493,73078312,73081982,73082825,73087753,73090522	Gene ID= ENSG00000157107.13 TPM= 123.76 Transcript Type= protein_coding
chr5	73120292	73131817	73120292	73131817	+	ENST00000454765.6@TMEM171	ENST00000454765.6	protein_coding	73120292,73123306,73128390,73131538	73120696,73124013,73128531,73131817	Gene ID= ENSG00000157111.12 TPM= 1.17 Transcript Type= protein_coding
chr5	73120569	73131809	73120569	73131809	+	ENST00000287773.5@TMEM171	ENST00000287773.5	protein_coding	73120569,73123306,73128390,73131541	73120696,73124013,73128531,73131809	Gene ID= ENSG00000157111.12 TPM= 1.17 Transcript Type= protein_coding
chr5	73446256	73448527	73446256	73448527	-	ENST00000615637.2@FOXD1	ENST00000615637.2	protein_coding	73446256	73448527	Gene ID= ENSG00000251493.4 TPM= 2.34 Transcript Type= protein_coding
chr5	73497550	73498293	73497550	73498293	-	ENST00000607001.1@AC099522.2	ENST00000607001.1	lincRNA	73497550	73498293	Gene ID= ENSG00000272525.1 TPM= 1.17 Transcript Type= lincRNA
chr5	73498408	73505495	73498408	73505495	+	ENST00000335895.12@BTF3	ENST00000335895.12	protein_coding	73498408,73499134,73502488,73502916,73504347,73505192	73498558,73499202,73502601,73503117,73504403,73505495	Gene ID= ENSG00000145741.15 TPM= 266.21 Transcript Type= protein_coding
chr5	73539254	73565639	73539254	73565639	-	transcript1799.chr5.nnic@ANKRA2	transcript1799.chr5.nnic	protein_coding	73565132,73562593,73561130,73557575,73555488,73554861,73554322,73553406,73552335,73539254	73565639,73562985,73561288,73557640,73555585,73554986,73554388,73553486,73552852,73539266	Gene ID= ENSG00000164331.9 TPM= 2.34 Transcript Type= NA
chr5	73552335	73565639	73552335	73565639	-	transcript1802.chr5.nic@ANKRA2	transcript1802.chr5.nic	protein_coding	73565132,73562580,73561130,73557575,73555488,73554861,73554322,73553406,73552335	73565639,73562985,73561288,73557640,73555585,73554986,73554388,73553486,73552852	Gene ID= ENSG00000164331.9 TPM= 3.5 Transcript Type= NA
chr5	73552335	73565639	73552335	73565639	-	transcript1808.chr5.nic@ANKRA2	transcript1808.chr5.nic	protein_coding	73565132,73562593,73561130,73555488,73554861,73554322,73553406,73552335	73565639,73562985,73561288,73557640,73554986,73554388,73553486,73552852	Gene ID= ENSG00000164331.9 TPM= 2.34 Transcript Type= NA
chr5	73552335	73565686	73552335	73565686	-	ENST00000296785.7@ANKRA2	ENST00000296785.7	protein_coding	73565132,73562593,73561130,73557575,73555488,73554861,73554322,73553406,73552335	73565686,73562985,73561288,73557640,73555585,73554986,73554388,73553486,73552852	Gene ID= ENSG00000164331.9 TPM= 12.84 Transcript Type= protein_coding
chr5	73557431	73565667	73557431	73565667	-	ENST00000515804.1@ANKRA2	ENST00000515804.1	protein_coding	73565132,73562593,73561130,73557431	73565667,73562985,73561288,73557640	Gene ID= ENSG00000164331.9 TPM= 1.17 Transcript Type= retained_intron
chr5	73565741	73581969	73565741	73581969	+	ENST00000296792.8@UTP15	ENST00000296792.8	protein_coding	73565741,73567262,73568235,73568420,73569497,73570586,73572489,73576952,73577856,73578751,73579017,73579317,73579877	73565912,73567434,73568327,73568604,73569675,73570711,73572624,73577036,73578005,73578852,73579150,73579375,73581969	Gene ID= ENSG00000164338.9 TPM= 7.01 Transcript Type= protein_coding
chr5	73813496	73911702	73813496	73911702	+	transcript1831.chr5.nic@ARHGEF28	transcript1831.chr5.nic	protein_coding	73813496,73832338,73840480,73846268,73848976,73852650,73857656,73858087,73864817,73865965,73867876,73868100,73870069,73872999,73882472,73883767,73885850,73887603,73892052,73893197,73894393,73897962,73901184,73904222,73904358,73909412,73911275	73813673,73832459,73840760,73846475,73849087,73852692,73857779,73858219,73864872,73866013,73868020,73868227,73870209,73873246,73882594,73883884,73886104,73887679,73892230,73893288,73894575,73898093,73901284,73904260,73904405,73909897,73911702	Gene ID= ENSG00000214944.9 TPM= 3.5 Transcript Type= NA
chr5	73867657	73911702	73867657	73911702	+	transcript1836.chr5.nic@ARHGEF28	transcript1836.chr5.nic	protein_coding	73867657,73868100,73870069,73872999,73882472,73883767,73885850,73887603,73892052,73893197,73894393,73897962,73901184,73904222,73904358,73909412,73911275	73868020,73868227,73870209,73873246,73882594,73883884,73886104,73887679,73892230,73893288,73894575,73898093,73901284,73904260,73904405,73909897,73911702	Gene ID= ENSG00000214944.9 TPM= 15.18 Transcript Type= NA
chr5	73626158	73911697	73626158	73911697	+	ENST00000296794.10@ARHGEF28	ENST00000296794.10	protein_coding	73626158,73684841,73749837,73752909,73773855,73776516,73780676,73794402,73795331,73832338,73840480,73846268,73848976,73852650,73857656,73858087,73864817,73865965,73867876,73868100,73870069,73872999,73882472,73883767,73885850,73887603,73892052,73893197,73894393,73897962,73901184,73904222,73904358,73909412,73911275	73626322,73684884,73749984,73753202,73774038,73776696,73780745,73794454,73795391,73832459,73840760,73846475,73849087,73852692,73857779,73858219,73864872,73866013,73868020,73868227,73870209,73873246,73882594,73883884,73886104,73887679,73892230,73893288,73894575,73898093,73901284,73904260,73904405,73909897,73911697	Gene ID= ENSG00000214944.9 TPM= 1.17 Transcript Type= protein_coding
chr5	73626158	73941992	73626158	73941992	+	ENST00000513042.6@ARHGEF28	ENST00000513042.6	protein_coding	73626158,73684841,73749837,73752909,73773855,73776516,73780676,73794402,73795331,73832338,73840480,73846268,73848976,73852650,73857656,73858087,73864817,73865965,73867876,73868100,73870069,73872999,73882472,73883767,73885850,73887603,73892052,73893197,73894393,73897962,73901184,73904222,73904358,73909412,73911275,73940844	73626322,73684884,73749984,73753202,73774038,73776696,73780745,73794454,73795391,73832459,73840760,73846475,73849087,73852692,73857779,73858219,73864872,73866013,73868020,73868227,73870209,73873246,73882594,73883884,73886104,73887679,73892230,73893288,73894575,73898093,73901284,73904260,73904405,73909897,73911575,73941992	Gene ID= ENSG00000214944.9 TPM= 1.17 Transcript Type= protein_coding
chr5	74627406	74641424	74627406	74641424	-	ENST00000302351.8@ENC1	ENST00000302351.8	protein_coding	74640307,74634684,74627406	74641424,74636498,74629992	Gene ID= ENSG00000171617.13 TPM= 5.84 Transcript Type= protein_coding
chr5	74685144	74721288	74685144	74721288	+	ENST00000261416.11@HEXB	ENST00000261416.11	protein_coding	74685144,74689328,74693639,74696693,74696996,74705219,74713506,74715510,74716587,74718291,74718797,74720428,74720643,74721118	74685559,74689473,74693704,74696739,74697106,74705320,74713635,74715690,74716673,74718363,74718971,74720518,74720747,74721288	Gene ID= ENSG00000049860.13 TPM= 445.24 Transcript Type= protein_coding
chr5	74719904	74723767	74719904	74723767	-	transcript1868.chr5.nnic@NA	transcript1868.chr5.nnic	NA	74719904	74723767	Gene ID= novel_gene_chr5_1869 TPM= 3.5 Transcript Type= NA
chr5	74721204	74767371	74721204	74767371	-	ENST00000296805.7@GFM2	ENST00000296805.7	protein_coding	74766938,74763680,74760902,74759369,74758849,74751368,74750579,74747692,74746105,74745678,74741529,74739989,74738502,74738318,74736796,74733022,74730260,74725941,74725640,74722379,74721204	74767371,74763766,74760986,74759426,74758946,74751493,74750667,74747780,74746165,74745857,74741609,74740137,74738642,74738417,74736985,74733098,74730398,74726126,74725755,74722561,74721783	Gene ID= ENSG00000164347.17 TPM= 5.84 Transcript Type= protein_coding
chr5	74721258	74767150	74721258	74767150	-	transcript1847.chr5.nic@GFM2	transcript1847.chr5.nic	protein_coding	74766938,74763680,74760902,74759369,74758849,74751368,74750579,74747692,74746105,74745678,74741529,74739989,74738502,74738318,74736796,74733022,74725941,74725640,74722379,74721258	74767150,74763766,74760986,74759426,74758946,74751493,74750667,74747780,74746165,74745857,74741609,74740137,74738642,74738417,74736985,74733098,74726126,74725755,74722561,74721783	Gene ID= ENSG00000164347.17 TPM= 3.5 Transcript Type= NA
chr5	74721258	74767150	74721258	74767150	-	transcript1849.chr5.nic@GFM2	transcript1849.chr5.nic	protein_coding	74766938,74763680,74760902,74759369,74758849,74751368,74750579,74747692,74746105,74745678,74741529,74739989,74738502,74738318,74736796,74733022,74730260,74725941,74725640,74721258	74767150,74763766,74760986,74759426,74758946,74751493,74750667,74747780,74746165,74745857,74741609,74740137,74738642,74738417,74736985,74733098,74730398,74726126,74725755,74722561	Gene ID= ENSG00000164347.17 TPM= 3.5 Transcript Type= NA
chr5	74736669	74767146	74736669	74767146	-	ENST00000427854.6@GFM2	ENST00000427854.6	protein_coding	74766938,74763680,74760902,74759369,74758849,74751368,74750579,74747692,74746105,74745678,74741529,74739989,74738502,74738318,74736669	74767146,74763766,74760986,74759426,74758946,74751493,74750667,74747780,74746165,74745857,74741609,74740137,74738642,74738417,74736985	Gene ID= ENSG00000164347.17 TPM= 2.34 Transcript Type= protein_coding
chr5	74744392	74767150	74744392	74767150	-	transcript1862.chr5.nic@GFM2	transcript1862.chr5.nic	protein_coding	74766938,74763680,74760902,74759369,74758849,74751368,74750579,74747692,74746105,74744392	74767150,74763766,74760986,74759426,74758946,74751493,74750667,74747780,74746165,74745857	Gene ID= ENSG00000164347.17 TPM= 2.34 Transcript Type= NA
chr5	74767241	74776818	74767241	74776818	+	transcript1870.chr5.nnic@NSA2	transcript1870.chr5.nnic	protein_coding	74767241,74768931,74769214,74770631,74772313,74773868,74776604	74767363,74769118,74769364,74770810,74772421,74774060,74776818	Gene ID= ENSG00000164346.9 TPM= 4.67 Transcript Type= NA
chr5	74766992	74780113	74766992	74780113	+	ENST00000610426.4@NSA2	ENST00000610426.4	protein_coding	74766992,74768931,74769214,74770631,74773868,74776604	74767363,74769118,74769364,74770810,74774060,74780113	Gene ID= ENSG00000164346.9 TPM= 11.68 Transcript Type= protein_coding
chr5	75025346	75030899	75025346	75030899	-	ENST00000322348.5@GCNT4	ENST00000322348.5	protein_coding	75025346	75030899	Gene ID= ENSG00000176928.5 TPM= 1.17 Transcript Type= protein_coding
chr5	75337237	75361423	75337237	75361423	+	transcript1879.chr5.nnic@HMGCR	transcript1879.chr5.nnic	protein_coding	75337237,75342583,75343853,75344245,75344623,75345574,75347204,75350042,75350258,75350789,75351068,75351424,75354503,75355056,75355365,75356343,75358657,75359170,75359398,75359985,75360288	75337300,75342770,75343964,75344332,75344745,75345658,75347309,75350148,75350374,75350949,75351315,75351602,75354697,75355214,75355522,75356448,75358827,75359310,75359556,75360139,75361423	Gene ID= ENSG00000113161.15 TPM= 3.5 Transcript Type= NA
chr5	75337168	75362104	75337168	75362104	+	ENST00000287936.8@HMGCR	ENST00000287936.8	protein_coding	75337168,75342583,75343853,75344245,75345574,75347204,75350042,75350258,75350789,75351068,75351424,75354503,75355056,75355365,75356343,75358657,75359170,75359398,75359985,75360288	75337300,75342770,75343964,75344332,75345658,75347309,75350148,75350374,75350949,75351315,75351602,75354697,75355214,75355522,75356448,75358827,75359310,75359556,75360139,75362104	Gene ID= ENSG00000113161.15 TPM= 60.13 Transcript Type= protein_coding
chr5	75376895	75511622	75376895	75511622	-	transcript1907.chr5.nic@COL4A3BP	transcript1907.chr5.nic	protein_coding	75511112,75505982,75459065,75426371,75425361,75419341,75416876,75411011,75402972,75400205,75389592,75385902,75384642,75381949,75381072,75376895	75511622,75506116,75459181,75426478,75425499,75419424,75417033,75411103,75403058,75400297,75389687,75386034,75384712,75382077,75381201,75379473	Gene ID= ENSG00000113163.15 TPM= 3.5 Transcript Type= NA
chr5	75504752	75511639	75504752	75511639	-	transcript1912.chr5.nic@COL4A3BP	transcript1912.chr5.nic	protein_coding	75511112,75504752	75511639,75506116	Gene ID= ENSG00000113163.15 TPM= 2.34 Transcript Type= NA
chr5	75374158	75511629	75374158	75511629	-	ENST00000261415.11@COL4A3BP	ENST00000261415.11	protein_coding	75511112,75505982,75459065,75426371,75425361,75419341,75416876,75411011,75402972,75400205,75389592,75385902,75384642,75381949,75381072,75379337,75374158	75511629,75506116,75459181,75426478,75425499,75419424,75417033,75411103,75403058,75400297,75389687,75386034,75384712,75382077,75381201,75379473,75374191	Gene ID= ENSG00000113163.15 TPM= 8.17 Transcript Type= protein_coding
chr5	75511756	75601144	75511756	75601144	+	ENST00000241436.8@POLK	ENST00000241436.8	protein_coding	75511756,75547010,75552472,75569340,75573738,75576780,75581209,75583293,75584760,75587026,75590344,75593878,75596222,75597747,75597934	75511914,75547157,75552591,75569492,75573869,75576933,75581448,75583417,75584926,75587058,75590440,75594049,75597178,75597789,75601144	Gene ID= ENSG00000122008.15 TPM= 4.67 Transcript Type= protein_coding
chr5	76403053	76590565	76403053	76590565	+	transcript1931.chr5.nic@IQGAP2	transcript1931.chr5.nic	protein_coding	76403053,76461570,76562396,76570580,76575693,76588906,76589615,76590408	76403591,76461669,76562552,76570657,76575769,76588973,76589728,76590565	Gene ID= ENSG00000145703.15 TPM= 4.67 Transcript Type= NA
chr5	76403271	76463143	76403271	76463143	+	transcript1934.chr5.nic@IQGAP2	transcript1934.chr5.nic	protein_coding	76403271,76461570	76403591,76463143	Gene ID= ENSG00000145703.15 TPM= 2.34 Transcript Type= NA
chr5	76403249	76708132	76403249	76708132	+	ENST00000274364.10@IQGAP2	ENST00000274364.10	protein_coding	76403249,76461570,76562396,76570580,76575693,76588906,76589615,76590408,76592838,76597439,76600812,76606179,76611020,76627410,76631859,76637034,76640933,76652750,76654200,76654934,76658459,76665026,76668681,76671759,76673449,76673952,76674477,76677218,76683115,76683776,76693355,76695454,76697987,76701076,76702482,76707200	76403591,76461669,76562552,76570657,76575769,76588973,76589728,76590586,76592925,76597602,76600972,76606303,76611183,76627500,76632026,76637176,76641103,76652833,76654271,76655003,76658667,76665175,76668844,76671983,76673589,76674036,76674709,76677350,76683217,76683917,76693442,76695666,76698147,76701213,76702590,76708132	Gene ID= ENSG00000145703.15 TPM= 19.85 Transcript Type= protein_coding
chr5	76644297	76647804	76644297	76647804	-	transcript1935.chr5.nnic@NA	transcript1935.chr5.nnic	NA	76644297	76647804	Gene ID= novel_gene_chr5_1936 TPM= 2.34 Transcript Type= NA
chr5	76716043	76735781	76716043	76735781	+	ENST00000319211.4@F2R	ENST00000319211.4	protein_coding	76716043,76732314	76716395,76735781	Gene ID= ENSG00000181104.6 TPM= 33.86 Transcript Type= protein_coding
chr5	76818977	76835315	76818977	76835315	+	ENST00000296677.4@F2RL1	ENST00000296677.4	protein_coding	76818977,76832690	76819264,76835315	Gene ID= ENSG00000164251.4 TPM= 19.85 Transcript Type= protein_coding
chr5	76952713	76969474	76952713	76969474	+	ENST00000274368.8@CRHBP	ENST00000274368.8	protein_coding	76952713,76953601,76954029,76955653,76958741,76963343,76968728	76953215,76953694,76954186,76955863,76958889,76963460,76969474	Gene ID= ENSG00000145708.10 TPM= 1.17 Transcript Type= protein_coding
chr5	77030385	77065234	77030385	77065234	+	ENST00000312916.11@AGGF1	ENST00000312916.11	protein_coding	77030385,77034418,77035541,77036556,77039531,77046347,77048161,77048936,77052706,77053965,77055514,77059616,77061703,77063052	77030976,77034520,77035743,77036720,77039719,77046677,77048272,77048987,77052807,77054130,77055596,77059743,77061802,77065234	Gene ID= ENSG00000164252.12 TPM= 14.01 Transcript Type= protein_coding
chr5	77424731	77492222	77424731	77492222	-	transcript1965.chr5.nnic@WDR41	transcript1965.chr5.nnic	protein_coding	77492170,77489457,77464761,77463095,77459062,77453817,77451291,77449760,77440813,77438240,77437336,77436261,77432893,77424731	77492222,77489572,77464809,77463226,77459124,77453928,77451353,77449870,77440997,77438361,77437424,77436394,77433287,77426191	Gene ID= ENSG00000164253.13 TPM= 2.34 Transcript Type= NA
chr5	77426652	77492485	77426652	77492485	-	transcript1966.chr5.nic@WDR41	transcript1966.chr5.nic	protein_coding	77492170,77489457,77464761,77463095,77459062,77453817,77451291,77449760,77440813,77438240,77437336,77436261,77432893,77426652	77492485,77489572,77464809,77463226,77459124,77453928,77451353,77449870,77440997,77438361,77437424,77436394,77433287,77427034	Gene ID= ENSG00000164253.13 TPM= 2.34 Transcript Type= NA
chr5	77430933	77492596	77430933	77492596	-	ENST00000296679.8@WDR41	ENST00000296679.8	protein_coding	77492170,77489457,77464761,77463095,77459062,77453817,77451291,77449760,77440813,77438240,77437336,77436261,77430933	77492596,77489572,77464809,77463226,77459124,77453928,77451353,77449870,77440997,77438361,77437424,77436394,77433287	Gene ID= ENSG00000164253.13 TPM= 8.17 Transcript Type= protein_coding
chr5	77691166	77776361	77691166	77776361	-	ENST00000380377.8@TBCA	ENST00000380377.8	protein_coding	77776205,77708242,77693266,77691166	77776361,77708347,77693352,77691498	Gene ID= ENSG00000171530.13 TPM= 42.03 Transcript Type= protein_coding
chr5	77691267	77776261	77691267	77776261	-	ENST00000518338.6@TBCA	ENST00000518338.6	protein_coding	77776205,77708242,77705566,77693266,77691267	77776261,77708347,77705634,77693352,77691498	Gene ID= ENSG00000171530.13 TPM= 1.17 Transcript Type= protein_coding
chr5	78000525	78294755	78000525	78294755	-	ENST00000255194.10@AP3B1	ENST00000255194.10	protein_coding	78294452,78267520,78240862,78228144,78227372,78225542,78216055,78181507,78177339,78175784,78175626,78165610,78162819,78156258,78141143,78129121,78128030,78116126,78113752,78110207,78100953,78089393,78039043,78034361,78020692,78015410,78000525	78294755,78267595,78240936,78228239,78227532,78225608,78216237,78181662,78177436,78175838,78175697,78165672,78162951,78156367,78141319,78129307,78128160,78116234,78113923,78110354,78101025,78089499,78039274,78034445,78020789,78015548,78003055	Gene ID= ENSG00000132842.13 TPM= 20.43 Transcript Type= protein_coding
chr5	78002326	78294692	78002326	78294692	-	ENST00000519295.5@AP3B1	ENST00000519295.5	protein_coding	78294440,78267520,78240862,78228144,78227372,78225542,78216055,78181507,78177339,78175784,78175626,78165610,78162819,78156258,78141143,78129121,78128030,78116126,78113752,78110207,78100953,78089393,78039043,78034361,78020692,78015410,78002326	78294692,78267595,78240936,78228239,78227532,78225608,78216237,78181662,78177436,78175838,78175697,78165672,78162951,78156367,78141319,78129307,78128160,78116234,78113923,78110354,78101025,78089499,78039274,78034445,78020789,78015548,78003055	Gene ID= ENSG00000132842.13 TPM= 27.44 Transcript Type= protein_coding
chr5	78358801	78360507	78358801	78360507	-	ENST00000421004.3@SCAMP1-AS1	ENST00000421004.3	lincRNA	78360214,78358801	78360507,78359985	Gene ID= ENSG00000245556.2 TPM= 7.01 Transcript Type= lincRNA
chr5	78360531	78478281	78360531	78478281	+	transcript1992.chr5.nic@SCAMP1	transcript1992.chr5.nic	protein_coding	78360531,78388837,78415520,78416541,78418775,78421801,78459245,78475504	78360728,78388914,78415618,78416649,78418903,78421960,78459362,78478281	Gene ID= ENSG00000085365.17 TPM= 8.17 Transcript Type= NA
chr5	78360583	78479071	78360583	78479071	+	ENST00000621999.4@SCAMP1	ENST00000621999.4	protein_coding	78360583,78388837,78415520,78416541,78418775,78421801,78449933,78459245,78475504	78360728,78388914,78415618,78416649,78418903,78421960,78450034,78459362,78479071	Gene ID= ENSG00000085365.17 TPM= 3.5 Transcript Type= protein_coding
chr5	78485217	78510423	78485217	78510423	-	transcript2003.chr5.nic@LHFPL2	transcript2003.chr5.nic	protein_coding	78509784,78485217	78510423,78489153	Gene ID= ENSG00000145685.13 TPM= 7.79 Transcript Type= NA
chr5	78485215	78549151	78485215	78549151	-	ENST00000515007.6@LHFPL2	ENST00000515007.6	protein_coding	78549026,78509784,78485215	78549151,78510398,78489153	Gene ID= ENSG00000145685.13 TPM= 10.12 Transcript Type= protein_coding
chr5	78485217	78648825	78485217	78648825	-	ENST00000380345.6@LHFPL2	ENST00000380345.6	protein_coding	78648499,78632264,78564813,78509784,78485217	78648825,78632368,78564871,78510398,78489153	Gene ID= ENSG00000145685.13 TPM= 67.34 Transcript Type= protein_coding
chr5	78777209	78985785	78777209	78985785	-	ENST00000264914.8@ARSB	ENST00000264914.8	protein_coding	78984937,78969006,78964416,78955295,78885584,78839356,78781852,78777209	78985785,78969192,78964606,78955502,78885827,78839426,78781974,78780662	Gene ID= ENSG00000113273.15 TPM= 18.68 Transcript Type= protein_coding
chr5	78815511	78986087	78815511	78986087	-	ENST00000396151.7@ARSB	ENST00000396151.7	protein_coding	78985899,78984937,78969006,78964416,78955295,78885584,78839356,78815511	78986087,78985558,78969192,78964606,78955502,78885827,78839426,78816114	Gene ID= ENSG00000113273.15 TPM= 2.34 Transcript Type= protein_coding
chr5	79069717	79089466	79069717	79089466	+	ENST00000255192.7@BHMT2	ENST00000255192.7	protein_coding	79069717,79077480,79079369,79080687,79082809,79083192,79083628,79088493	79069815,79077612,79079460,79080878,79082956,79083374,79083856,79089466	Gene ID= ENSG00000132840.9 TPM= 1.17 Transcript Type= protein_coding
chr5	79612433	79686648	79612433	79686648	+	ENST00000423041.6@PAPD4	ENST00000423041.6	protein_coding	79612433,79613011,79619612,79619994,79623252,79640851,79641105,79642844,79645123,79648617,79649062,79656958,79668892,79679579,79681982,79685199	79612735,79613075,79619785,79620083,79623489,79640965,79641196,79642910,79645192,79648693,79649190,79657001,79669028,79679670,79682061,79686648	Gene ID= ENSG00000164329.13 TPM= 4.09 Transcript Type= protein_coding
chr5	79612448	79686648	79612448	79686648	+	transcript2027.chr5.nic@PAPD4	transcript2027.chr5.nic	protein_coding	79612448,79617530,79619612,79619994,79623252,79640851,79641105,79642832,79645123,79648617,79649062,79656958,79668892,79679579,79681982,79685199	79613075,79617599,79619785,79620083,79623489,79640965,79641196,79642910,79645192,79648693,79649190,79657001,79669028,79679670,79682061,79686648	Gene ID= ENSG00000164329.13 TPM= 2.34 Transcript Type= NA
chr5	79612455	79686648	79612455	79686648	+	transcript2028.chr5.nnic@PAPD4	transcript2028.chr5.nnic	protein_coding	79612455,79613011,79619612,79619994,79623252,79640851,79641105,79642844,79645123,79648617,79649062,79656958,79668892,79679579,79681982,79685199	79612850,79613075,79619785,79620083,79623489,79640965,79641196,79642910,79645192,79648693,79649190,79657001,79669028,79679670,79682061,79686648	Gene ID= ENSG00000164329.13 TPM= 2.92 Transcript Type= NA
chr5	79612420	79686648	79612420	79686648	+	ENST00000453514.5@PAPD4	ENST00000453514.5	protein_coding	79612420,79619612,79619994,79623252,79640851,79641105,79642832,79645123,79648617,79649062,79656958,79668892,79679579,79681982,79685199	79613075,79619785,79620083,79623489,79640965,79641196,79642910,79645192,79648693,79649190,79657001,79669028,79679670,79682061,79686648	Gene ID= ENSG00000164329.13 TPM= 33.86 Transcript Type= protein_coding
chr5	79612440	79686648	79612440	79686648	+	transcript2038.chr5.nnic@PAPD4	transcript2038.chr5.nnic	protein_coding	79612440,79619612,79619994,79623252,79640851,79641105,79642832,79645123,79648617,79649062,79656958,79668892,79679579,79681982,79685199	79613075,79619785,79620083,79623489,79640965,79641196,79642985,79645192,79648693,79649190,79657001,79669028,79679670,79682061,79686648	Gene ID= ENSG00000164329.13 TPM= 2.34 Transcript Type= NA
chr5	79612573	79686648	79612573	79686648	+	ENST00000296783.7@PAPD4	ENST00000296783.7	protein_coding	79612573,79613011,79619612,79619994,79623252,79640851,79641105,79642832,79645123,79648617,79649062,79656958,79668892,79679579,79681982,79685199	79612769,79613075,79619785,79620083,79623489,79640965,79641196,79642910,79645192,79648693,79649190,79657001,79669028,79679670,79682061,79686648	Gene ID= ENSG00000164329.13 TPM= 1.17 Transcript Type= protein_coding
chr5	79991341	80083282	79991341	80083282	+	transcript2058.chr5.nic@THBS4	transcript2058.chr5.nic	protein_coding	79991341,79998332,80040077,80055785,80058206,80058708,80059440,80059703,80061695,80065409,80067973,80070306,80070643,80071021,80072278,80073275,80076855,80078049,80078921,80079062,80079905,80082406,80083080	79991412,79998375,80040280,80056032,80058314,80058790,80059491,80059905,80061832,80065477,80068125,80070410,80070750,80071180,80072396,80073327,80077048,80078227,80078969,80079258,80080077,80082545,80083282	Gene ID= ENSG00000113296.14 TPM= 2.34 Transcript Type= NA
chr5	80035348	80083287	80035348	80083287	+	ENST00000350881.6@THBS4	ENST00000350881.6	protein_coding	80035348,80040077,80055785,80058206,80058708,80059440,80059703,80061695,80065409,80067973,80070306,80070643,80071021,80072278,80073275,80076855,80078049,80078921,80079062,80079905,80082406,80083080	80035625,80040280,80056032,80058314,80058790,80059491,80059905,80061832,80065477,80068125,80070410,80070750,80071180,80072396,80073327,80077048,80078227,80078969,80079258,80080077,80082545,80083287	Gene ID= ENSG00000113296.14 TPM= 1.17 Transcript Type= protein_coding
chr5	80138727	80256079	80138727	80256079	-	ENST00000507668.6@SERINC5	ENST00000507668.6	protein_coding	80255896,80202886,80177886,80177315,80174954,80169335,80166383,80158836,80150882,80147245,80146090,80138727	80256079,80203053,80178064,80177397,80175047,80169546,80166478,80158962,80150948,80147284,80146234,80143810	Gene ID= ENSG00000164300.16 TPM= 47.87 Transcript Type= protein_coding
chr5	80164911	80256047	80164911	80256047	-	transcript2071.chr5.nic@SERINC5	transcript2071.chr5.nic	protein_coding	80255896,80202886,80177886,80177315,80174954,80169335,80164911	80256047,80203053,80178064,80177397,80175047,80169546,80166478	Gene ID= ENSG00000164300.16 TPM= 4.67 Transcript Type= NA
chr5	80408026	80479135	80408026	80479135	+	ENST00000505560.4@ZFYVE16	ENST00000505560.4	protein_coding	80408026,80427492,80434109,80436756,80439936,80443123,80445263,80448026,80449591,80450431,80451485,80455692,80456461,80456945,80459414,80472761,80473754,80474663,80477219	80408153,80427545,80434217,80439007,80440032,80443284,80445405,80448404,80449713,80450586,80451709,80455774,80456565,80457092,80459494,80472923,80473859,80474830,80479135	Gene ID= ENSG00000039319.16 TPM= 2.34 Transcript Type= protein_coding
chr5	80407610	80478905	80407610	80478905	+	transcript2082.chr5.nnic@ZFYVE16	transcript2082.chr5.nnic	protein_coding	80407610,80434109,80436756,80439936,80443123,80445263,80448026,80449591,80450431,80451485,80455692,80456461,80456945,80459414,80472761,80473754,80474663,80477219	80407881,80434217,80439007,80440032,80443284,80445405,80448404,80449713,80450586,80451709,80455774,80456565,80457092,80459494,80472923,80473859,80474830,80478905	Gene ID= ENSG00000039319.16 TPM= 3.5 Transcript Type= NA
chr5	80408013	80479350	80408013	80479350	+	ENST00000338008.9@ZFYVE16	ENST00000338008.9	protein_coding	80408013,80434109,80436756,80439936,80443123,80445263,80448026,80449591,80450431,80451485,80455692,80456461,80456945,80459414,80472761,80473754,80474663,80477219	80408153,80434217,80439007,80440032,80443284,80445405,80448404,80449713,80450586,80451709,80455774,80456565,80457092,80459494,80472923,80473859,80474830,80479350	Gene ID= ENSG00000039319.16 TPM= 3.5 Transcript Type= protein_coding
chr5	80482712	80488063	80482712	80488063	-	ENST00000504300.1@AC008771.1	ENST00000504300.1	antisense_RNA	80487778,80485466,80482712	80488063,80485561,80483166	Gene ID= ENSG00000249042.5 TPM= 2.34 Transcript Type= antisense_RNA
chr5	80626228	80654983	80626228	80654983	-	ENST00000439211.6@DHFR	ENST00000439211.6	protein_coding	80654404,80654008,80649389,80637883,80633877,80626228	80654983,80654057,80649494,80638009,80633992,80629165	Gene ID= ENSG00000228716.6 TPM= 4.67 Transcript Type= protein_coding
chr5	80960739	81088579	80960739	81088579	+	ENST00000638442.1@RASGRF2	ENST00000638442.1	protein_coding	80960739,81042877,81068032,81070492,81073199,81080121,81080596,81085802,81086835,81087128	80961026,81042983,81068179,81070581,81073452,81080200,81080789,81085911,81086953,81088579	Gene ID= ENSG00000113319.12 TPM= 2.34 Transcript Type= protein_coding
chr5	80960672	81230156	80960672	81230156	+	ENST00000265080.8@RASGRF2	ENST00000265080.8	protein_coding	80960672,81042877,81068032,81070492,81073199,81080121,81080596,81085802,81086835,81092801,81094296,81094856,81108996,81112610,81113538,81123642,81127074,81180175,81201330,81206845,81207246,81208354,81212366,81215876,81217356,81219710,81225678	80961026,81042983,81068179,81070581,81073452,81080200,81080789,81085911,81086953,81092961,81094362,81094992,81109078,81112858,81113920,81123767,81127163,81180281,81201442,81206905,81207349,81208438,81212563,81215955,81217473,81219778,81230156	Gene ID= ENSG00000113319.12 TPM= 3.5 Transcript Type= protein_coding
chr5	81237565	81301559	81237565	81301559	-	ENST00000502041.2@CKMT2-AS1	ENST00000502041.2	antisense_RNA	81301287,81237565	81301559,81239360	Gene ID= ENSG00000247572.7 TPM= 3.5 Transcript Type= antisense_RNA
chr5	81230683	81234044	81230683	81234044	+	transcript2127.chr5.nnic@NA	transcript2127.chr5.nnic	NA	81230683	81234044	Gene ID= novel_gene_chr5_2128 TPM= 12.84 Transcript Type= NA
chr5	81233320	81266395	81233320	81266395	+	ENST00000437669.5@CKMT2	ENST00000437669.5	protein_coding	81233320,81251113,81252695,81254396,81254993,81256915,81257733,81259120,81263491,81266139	81233381,81251284,81252893,81254491,81255214,81257000,81257856,81259254,81263616,81266395	Gene ID= ENSG00000131730.15 TPM= 1.17 Transcript Type= protein_coding
chr5	81233285	81266397	81233285	81266397	+	ENST00000254035.8@CKMT2	ENST00000254035.8	protein_coding	81233285,81251113,81252695,81254396,81254993,81256915,81257733,81259120,81263491,81266139	81233377,81251284,81252893,81254491,81255214,81257000,81257856,81259254,81263616,81266397	Gene ID= ENSG00000131730.15 TPM= 1.17 Transcript Type= protein_coding
chr5	81301624	81313154	81301624	81313154	+	ENST00000380199.9@ZCCHC9	ENST00000380199.9	protein_coding	81301624,81304741,81308561,81308946,81311211,81312544	81301670,81305141,81308711,81309038,81311279,81313154	Gene ID= ENSG00000131732.11 TPM= 10.51 Transcript Type= protein_coding
chr5	81413021	81751253	81413021	81751253	-	ENST00000320672.8@SSBP2	ENST00000320672.8	protein_coding	81750981,81650267,81636557,81615473,81513628,81489250,81474496,81473700,81466974,81461055,81448790,81446868,81442653,81440558,81437430,81428585,81413021	81751253,81650339,81636618,81615557,81513717,81489309,81474562,81473770,81467041,81461103,81448825,81446922,81442723,81440636,81437458,81428683,81420533	Gene ID= ENSG00000145687.16 TPM= 5.84 Transcript Type= protein_coding
chr5	81419918	81751250	81419918	81751250	-	ENST00000514493.5@SSBP2	ENST00000514493.5	protein_coding	81750981,81650267,81636557,81615473,81489250,81474496,81473700,81466974,81461055,81448790,81446868,81442653,81440558,81437430,81428585,81419918	81751250,81650339,81636618,81615557,81489309,81474562,81473770,81467041,81461103,81448825,81446922,81442723,81440636,81437458,81428683,81420533	Gene ID= ENSG00000145687.16 TPM= 2.34 Transcript Type= protein_coding
chr5	81463759	81751142	81463759	81751142	-	transcript2148.chr5.nic@SSBP2	transcript2148.chr5.nic	protein_coding	81750981,81650267,81636557,81615473,81513628,81489250,81474496,81473700,81463759	81751142,81650339,81636618,81615557,81513717,81489309,81474562,81473770,81467041	Gene ID= ENSG00000145687.16 TPM= 4.67 Transcript Type= NA
chr5	81419936	81513717	81419936	81513717	-	ENST00000504985.5@SSBP2	ENST00000504985.5	protein_coding	81513628,81489250,81474496,81473700,81466974,81461055,81448790,81446868,81442653,81440558,81437430,81428585,81419936	81513717,81489309,81474562,81473770,81467065,81461103,81448825,81446922,81442723,81440636,81437458,81428683,81420533	Gene ID= ENSG00000145687.16 TPM= 2.34 Transcript Type= protein_coding
chr5	81972025	82256139	81972025	82256139	+	ENST00000282185.7@ATG10	ENST00000282185.7	protein_coding	81972025,81987559,82058495,82164399,82178490,82252562,82253314,82254068	81972306,81987678,82058602,82164537,82178587,82252659,82253429,82256139	Gene ID= ENSG00000152348.15 TPM= 3.5 Transcript Type= protein_coding
chr5	81972051	82254792	81972051	82254792	+	ENST00000458350.7@ATG10	ENST00000458350.7	protein_coding	81972051,81976193,81987559,82058495,82164399,82178490,82252562,82253314,82254068	81972306,81976327,81987678,82058602,82164537,82178587,82252659,82253429,82254792	Gene ID= ENSG00000152348.15 TPM= 1.17 Transcript Type= protein_coding
chr5	82273320	82278355	82273320	82278355	-	transcript2156.chr5.nnic@RPS23	transcript2156.chr5.nnic	protein_coding	82278320,82277693,82276398,82274624,82273320	82278355,82277852,82276518,82276255,82274516	Gene ID= ENSG00000186468.12 TPM= 12.84 Transcript Type= NA
chr5	83052846	83077496	83052846	83077496	-	ENST00000502346.1@TMEM167A	ENST00000502346.1	protein_coding	83077321,83065008,83061877,83052846	83077496,83065117,83061911,83057154	Gene ID= ENSG00000174695.9 TPM= 94.58 Transcript Type= protein_coding
chr5	83504904	83509045	83504904	83509045	+	transcript2173.chr5.nnic@NA	transcript2173.chr5.nnic	NA	83504904	83509045	Gene ID= novel_gene_chr5_2174 TPM= 2.34 Transcript Type= NA
chr5	83940554	84384793	83940554	84384793	-	ENST00000296591.9@EDIL3	ENST00000296591.9	protein_coding	84384308,84254084,84229855,84180393,84137241,84106649,84066451,84064700,84060300,83963205,83940554	84384793,84254212,84229884,84180521,84137354,84106830,84066606,84064844,84060484,83963360,83943568	Gene ID= ENSG00000164176.12 TPM= 39.7 Transcript Type= protein_coding
chr5	86617904	86620962	86617904	86620962	+	ENST00000247655.3@COX7C	ENST00000247655.3	protein_coding	86617904,86619353,86620668	86618130,86619496,86620962	Gene ID= ENSG00000127184.12 TPM= 162.88 Transcript Type= protein_coding
chr5	86617928	86620766	86617928	86620766	+	ENST00000511472.5@COX7C	ENST00000511472.5	protein_coding	86617928,86619353,86620668	86618053,86619496,86620766	Gene ID= ENSG00000127184.12 TPM= 12.26 Transcript Type= processed_transcript
chr5	87394265	87413019	87394265	87413019	-	ENST00000256897.8@CCNH	ENST00000256897.8	protein_coding	87412678,87411224,87409290,87407976,87404844,87401702,87399394,87395044,87394265	87413019,87411346,87409363,87408186,87405007,87401772,87399505,87395104,87394484	Gene ID= ENSG00000134480.13 TPM= 36.2 Transcript Type= protein_coding
chr5	87394274	87412904	87394274	87412904	-	ENST00000504878.1@CCNH	ENST00000504878.1	protein_coding	87412435,87411224,87409290,87407976,87404844,87401702,87399394,87395044,87394274	87412904,87411346,87409363,87408186,87405007,87401772,87399505,87395104,87394484	Gene ID= ENSG00000134480.13 TPM= 2.34 Transcript Type= protein_coding
chr5	88195207	88268895	88195207	88268895	-	transcript2206.chr5.nic@TMEM161B	transcript2206.chr5.nic	protein_coding	88268721,88240813,88228445,88225769,88220563,88207029,88206439,88205814,88202962,88198976,88195207	88268895,88240916,88228528,88225866,88220719,88207180,88206499,88205954,88203075,88199150,88196488	Gene ID= ENSG00000164180.13 TPM= 3.5 Transcript Type= NA
chr5	88195206	88268848	88195206	88268848	-	ENST00000296595.10@TMEM161B	ENST00000296595.10	protein_coding	88268721,88240813,88228445,88225769,88220563,88207029,88206439,88205814,88202962,88198976,88197669,88195206	88268848,88240916,88228528,88225866,88220719,88207180,88206499,88205954,88203075,88199150,88197765,88196488	Gene ID= ENSG00000164180.13 TPM= 16.35 Transcript Type= protein_coding
chr5	88274241	88279912	88274241	88279912	-	transcript2222.chr5.nnic@NA	transcript2222.chr5.nnic	NA	88274241	88279912	Gene ID= novel_gene_chr5_2223 TPM= 2.34 Transcript Type= NA
chr5	88717117	88883464	88717117	88883464	-	ENST00000504921.6@MEF2C	ENST00000504921.6	protein_coding	88882955,88823735,88804598,88761185,88751857,88749070,88731729,88730211,88729218,88728493,88717117	88883464,88823930,88804801,88761328,88752043,88749117,88731901,88730234,88729347,88728628,88722925	Gene ID= ENSG00000081189.15 TPM= 1.17 Transcript Type= protein_coding
chr5	88720337	88883466	88720337	88883466	-	ENST00000437473.6@MEF2C	ENST00000437473.6	protein_coding	88882955,88823735,88804598,88761185,88751857,88749070,88731729,88730211,88729218,88728493,88720337	88883466,88823927,88804801,88761328,88752043,88749117,88731901,88730234,88729347,88728628,88722925	Gene ID= ENSG00000081189.15 TPM= 2.14 Transcript Type= protein_coding
chr5	88718274	88883184	88718274	88883184	-	transcript2231.chr5.nic@MEF2C	transcript2231.chr5.nic	protein_coding	88882955,88823735,88804598,88761185,88751857,88749070,88731729,88729218,88728493,88718274	88883184,88823930,88804801,88761328,88752043,88749117,88731901,88729347,88728628,88722829	Gene ID= ENSG00000081189.15 TPM= 2.34 Transcript Type= NA
chr5	88718274	88883184	88718274	88883184	-	ENST00000637481.1@MEF2C	ENST00000637481.1	protein_coding	88882955,88823735,88804598,88761185,88751866,88749070,88731729,88729218,88728493,88718274	88883184,88823927,88804801,88761328,88752043,88749117,88731901,88729347,88728628,88722925	Gene ID= ENSG00000081189.15 TPM= 1.17 Transcript Type= protein_coding
chr5	88720829	88883184	88720829	88883184	-	ENST00000510942.5@MEF2C	ENST00000510942.5	protein_coding	88882955,88823735,88804598,88761185,88751857,88749070,88731729,88729218,88728493,88720829	88883184,88823927,88804801,88761328,88752043,88749117,88731901,88729347,88728628,88722829	Gene ID= ENSG00000081189.15 TPM= 10.31 Transcript Type= protein_coding
chr5	88722489	88883181	88722489	88883181	-	ENST00000508569.5@MEF2C	ENST00000508569.5	protein_coding	88882955,88823735,88804598,88761185,88751857,88749070,88731729,88729218,88728493,88722489	88883181,88823930,88804801,88761328,88752043,88749117,88731901,88729347,88728628,88722925	Gene ID= ENSG00000081189.15 TPM= 1.17 Transcript Type= protein_coding
chr5	90393710	90409757	90393710	90409757	-	ENST00000522083.5@CETN3	ENST00000522083.5	protein_coding	90409645,90407699,90405685,90399358,90396493,90393710	90409757,90407834,90405799,90399549,90396564,90394107	Gene ID= ENSG00000153140.8 TPM= 1.17 Transcript Type= protein_coding
chr5	90392261	90409786	90392261	90409786	-	ENST00000283122.7@CETN3	ENST00000283122.7	protein_coding	90409645,90407699,90405685,90399358,90392261	90409786,90407834,90405799,90399549,90394107	Gene ID= ENSG00000153140.8 TPM= 1.17 Transcript Type= protein_coding
chr5	90394134	90409759	90394134	90409759	-	transcript2245.chr5.nic@CETN3	transcript2245.chr5.nic	protein_coding	90409645,90407699,90405685,90399358,90394134	90409759,90407834,90405799,90399549,90396564	Gene ID= ENSG00000153140.8 TPM= 2.34 Transcript Type= NA
chr5	90458203	90474768	90458203	90474768	-	ENST00000316610.6@MBLAC2	ENST00000316610.6	protein_coding	90473839,90458203	90474768,90461552	Gene ID= ENSG00000176055.9 TPM= 12.84 Transcript Type= protein_coding
chr5	90478571	90481863	90478571	90481863	-	transcript2254.chr5.nnic@NA	transcript2254.chr5.nnic	NA	90478571	90481863	Gene ID= novel_gene_chr5_2255 TPM= 2.34 Transcript Type= NA
chr5	90515611	90529584	90515611	90529584	-	transcript2257.chr5.nic@LYSMD3	transcript2257.chr5.nic	protein_coding	90529448,90525035,90515611	90529584,90525300,90519009	Gene ID= ENSG00000176018.12 TPM= 2.92 Transcript Type= NA
chr5	90515626	90529581	90515626	90529581	-	ENST00000315948.10@LYSMD3	ENST00000315948.10	protein_coding	90529448,90525035,90515626	90529581,90525300,90519484	Gene ID= ENSG00000176018.12 TPM= 53.13 Transcript Type= protein_coding
chr5	90558797	91164437	90558797	91164437	+	ENST00000405460.7@ADGRV1	ENST00000405460.7	protein_coding	90558797,90614835,90617804,90619086,90622597,90625130,90627211,90628562,90629210,90635114,90637725,90642636,90642856,90643803,90644706,90645968,90647498,90651604,90652346,90653209,90657905,90672546,90674054,90675243,90676080,90679549,90681315,90683586,90685780,90689861,90690797,90692605,90693890,90696937,90703665,90704389,90705400,90706231,90708816,90710981,90711184,90712287,90716467,90720048,90720935,90724832,90725086,90725549,90728669,90729642,90745046,90745591,90750551,90753574,90754983,90756454,90756979,90759409,90763305,90774186,90776453,90777905,90778427,90778865,90781430,90783124,90783838,90788071,90789702,90790873,90802739,90805284,90807602,90810233,90815619,90823425,90828944,90840578,90848637,90853284,90854062,90855741,90863757,90965415,90985344,91072447,91102219,91150030,91153221,91163782	90558917,90615019,90617953,90619181,90622701,90625243,90627776,90628832,90629539,90635290,90637948,90642762,90643041,90643983,90644869,90646091,90647764,90651730,90652563,90653952,90658278,90672722,90674234,90675445,90676209,90679629,90681454,90684195,90685995,90690076,90691041,90692786,90694701,90697146,90703795,90704488,90705579,90706394,90708909,90711059,90711322,90712428,90716729,90720223,90721059,90724989,90725232,90725656,90728933,90729764,90745265,90745795,90750697,90753829,90755185,90756630,90757161,90759588,90763469,90774303,90776576,90778043,90778609,90779097,90781578,90783325,90784057,90788310,90789851,90791346,90802882,90805458,90807737,90811338,90815736,90823596,90829186,90840985,90848821,90853533,90854201,90855901,90863857,90965531,90985522,91072604,91102340,91150221,91153398,91164437	Gene ID= ENSG00000164199.16 TPM= 1.17 Transcript Type= protein_coding
chr5	91368724	91383316	91368724	91383316	-	transcript2277.chr5.nic@ARRDC3	transcript2277.chr5.nic	protein_coding	91382813,91378694,91376621,91375511,91374922,91373684,91368724	91383316,91378775,91376768,91375613,91375178,91374276,91371456	Gene ID= ENSG00000113369.8 TPM= 3.79 Transcript Type= NA
chr5	91368724	91383359	91368724	91383359	-	ENST00000265138.3@ARRDC3	ENST00000265138.3	protein_coding	91382813,91378694,91376621,91375511,91374922,91374114,91373684,91368724	91383359,91378775,91376768,91375613,91375178,91374276,91373838,91371456	Gene ID= ENSG00000113369.8 TPM= 145.07 Transcript Type= protein_coding
chr5	93541872	93581288	93541872	93581288	-	ENST00000606696.5@NR2F1-AS1	ENST00000606696.5	antisense_RNA	93581142,93563364,93554874,93553761,93544795,93541872	93581288,93563463,93554995,93553863,93544915,93544024	Gene ID= ENSG00000237187.8 TPM= 2.34 Transcript Type= antisense_RNA
chr5	93583224	93594615	93583224	93594615	+	transcript2297.chr5.nnic@NR2F1	transcript2297.chr5.nnic	protein_coding	93583224,93585401,93587917,93593562	93584422,93585486,93588444,93594615	Gene ID= ENSG00000175745.11 TPM= 33.28 Transcript Type= NA
chr5	93583337	93594615	93583337	93594615	+	ENST00000327111.7@NR2F1	ENST00000327111.7	protein_coding	93583337,93587917,93593562	93585486,93588444,93594615	Gene ID= ENSG00000175745.11 TPM= 44.95 Transcript Type= protein_coding
chr5	93618069	94111679	93618069	94111679	-	transcript2314.chr5.nic@FAM172A	transcript2314.chr5.nic	protein_coding	94111511,94053126,93964458,93958777,93881470,93824148,93784383,93776159,93618069	94111679,94053227,93964523,93958968,93881688,93824267,93784499,93776243,93621129	Gene ID= ENSG00000113391.18 TPM= 2.34 Transcript Type= NA
chr5	93618071	93621495	93618071	93621495	-	transcript2316.chr5.nnic@FAM172A	transcript2316.chr5.nnic	protein_coding	93621366,93618071	93621495,93621129	Gene ID= ENSG00000113391.18 TPM= 2.34 Transcript Type= NA
chr5	93618069	94111635	93618069	94111635	-	ENST00000395965.7@FAM172A	ENST00000395965.7	protein_coding	94111511,94074646,94053126,94050731,93964458,93958777,93881470,93824148,93784383,93776159,93618069	94111635,94074769,94053227,94050831,93964523,93958968,93881688,93824267,93784499,93776243,93621129	Gene ID= ENSG00000113391.18 TPM= 22.18 Transcript Type= protein_coding
chr5	94618158	94695871	94618158	94695871	+	transcript2317.chr5.nnic@SLF1	transcript2317.chr5.nnic	protein_coding	94618158,94628811,94629092,94630503,94643273,94649454,94651702,94653272,94654630,94662298,94663750,94665861,94670151,94670843,94678808,94686573,94688506,94689473,94691564,94692074,94694831	94618318,94628924,94629167,94630743,94643435,94649597,94651845,94653421,94654752,94662351,94663908,94666024,94670279,94671008,94678955,94686718,94688669,94689606,94691656,94692256,94695871	Gene ID= ENSG00000133302.12 TPM= 2.34 Transcript Type= NA
chr5	94618347	94697621	94618347	94697621	+	ENST00000265140.9@SLF1	ENST00000265140.9	protein_coding	94618347,94628811,94629092,94630503,94643273,94649454,94651702,94653272,94654630,94662298,94663750,94665861,94670151,94670843,94678808,94686573,94688506,94689473,94691564,94692074,94694831	94618765,94628924,94629167,94630743,94643435,94649597,94651845,94653421,94654752,94662351,94663908,94666024,94670279,94671008,94678955,94686718,94688669,94689606,94691656,94692256,94697621	Gene ID= ENSG00000133302.12 TPM= 1.17 Transcript Type= protein_coding
chr5	94707137	95081646	94707137	95081646	-	transcript2325.chr5.nic@MCTP1	transcript2325.chr5.nic	protein_coding	95081426,95017367,94953219,94942348,94940084,94931953,94923962,94912806,94909251,94894649,94888879,94873139,94871315,94870872,94870417,94868333,94799013,94779110,94714777,94710818,94708512,94707137	95081646,95017484,94953361,94942427,94940195,94931991,94924021,94912976,94909381,94894835,94888972,94873241,94871417,94870973,94870491,94868452,94799132,94779163,94714886,94710927,94708609,94707567	Gene ID= ENSG00000175471.19 TPM= 2.34 Transcript Type= NA
chr5	94706579	95081645	94706579	95081645	-	ENST00000429576.6@MCTP1	ENST00000429576.6	protein_coding	95081426,95017367,94953219,94942348,94940084,94931953,94912806,94909251,94894649,94888879,94873139,94871315,94870872,94870417,94868333,94779110,94714777,94710818,94708512,94706579	95081645,95017484,94953361,94942427,94940195,94931991,94912976,94909381,94894835,94888972,94873241,94871417,94870973,94870491,94868452,94779163,94714886,94710927,94708609,94707567	Gene ID= ENSG00000175471.19 TPM= 1.17 Transcript Type= protein_coding
chr5	95463895	95555007	95463895	95555007	-	ENST00000358746.6@TTC37	ENST00000358746.6	protein_coding	95554936,95550581,95548560,95547061,95543184,95541815,95541305,95540690,95537043,95536817,95530089,95529001,95528013,95525587,95525398,95524465,95523655,95523202,95522054,95520716,95517146,95516916,95516672,95516525,95516353,95514855,95513571,95512477,95509594,95506934,95503814,95502880,95498370,95497416,95494964,95494682,95490908,95484724,95482473,95478290,95469780,95467866,95463895	95555007,95550650,95548715,95547151,95543327,95541906,95541380,95540830,95537141,95536925,95530229,95529102,95528152,95525673,95525501,95524591,95523834,95523326,95522307,95520818,95517322,95517060,95516750,95516586,95516409,95514923,95513645,95512618,95509687,95507011,95503938,95503003,95498591,95497488,95495017,95494793,95491036,95484845,95482631,95478442,95469910,95467989,95464681	Gene ID= ENSG00000198677.10 TPM= 33.86 Transcript Type= protein_coding
chr5	95555074	95605064	95555074	95605064	+	ENST00000380009.8@ARSK	ENST00000380009.8	protein_coding	95555074,95565998,95567890,95582916,95586562,95591401,95600847,95603237	95555404,95566127,95568049,95583198,95586733,95591625,95601071,95605064	Gene ID= ENSG00000164291.16 TPM= 14.01 Transcript Type= protein_coding
chr5	95730924	95789434	95730924	95789434	+	transcript2345.chr5.nic@RHOBTB3	transcript2345.chr5.nic	protein_coding	95730924,95731859,95736889,95748333,95752239,95755396,95763508,95768046,95780252,95783797,95788762	95731684,95732084,95737075,95748487,95752350,95755761,95763620,95768166,95780425,95783963,95789434	Gene ID= ENSG00000164292.12 TPM= 2.34 Transcript Type= NA
chr5	95731175	95796367	95731175	95796367	+	ENST00000379982.7@RHOBTB3	ENST00000379982.7	protein_coding	95731175,95731859,95736889,95748333,95752239,95755396,95763508,95768046,95780252,95783797,95788762,95793059	95731684,95732084,95737075,95748487,95752350,95755761,95763620,95768166,95780425,95783963,95788858,95796367	Gene ID= ENSG00000164292.12 TPM= 25.69 Transcript Type= protein_coding
chr5	95813849	95823005	95813849	95823005	-	ENST00000237858.10@GLRX	ENST00000237858.10	protein_coding	95822456,95816507,95813849	95823005,95816626,95814389	Gene ID= ENSG00000173221.13 TPM= 5.84 Transcript Type= protein_coding
chr5	95813979	95822259	95813979	95822259	-	transcript2356.chr5.nic@GLRX	transcript2356.chr5.nic	protein_coding	95822210,95816507,95813979	95822259,95816626,95814389	Gene ID= ENSG00000173221.13 TPM= 4.67 Transcript Type= NA
chr5	95813971	95822714	95813971	95822714	-	ENST00000379979.8@GLRX	ENST00000379979.8	protein_coding	95822456,95816507,95813971	95822714,95816626,95814957	Gene ID= ENSG00000173221.13 TPM= 3.5 Transcript Type= protein_coding
chr5	95813977	95819216	95813977	95819216	-	transcript2360.chr5.nnic@NA	transcript2360.chr5.nnic	NA	95813977	95819216	Gene ID= novel_gene_chr5_2361 TPM= 2.34 Transcript Type= NA
chr5	95834816	95835407	95834816	95835407	+	transcript2362.chr5.nnic@NA	transcript2362.chr5.nnic	NA	95834816	95835407	Gene ID= novel_gene_chr5_2363 TPM= 4.67 Transcript Type= NA
chr5	95885098	95962071	95885098	95962071	-	ENST00000237853.8@ELL2	ENST00000237853.8	protein_coding	95961575,95943002,95919424,95913771,95906523,95900956,95900693,95898240,95895628,95891103,95889086,95885098	95962071,95943049,95919545,95913934,95906782,95901080,95900780,95898810,95895691,95891274,95889130,95888987	Gene ID= ENSG00000118985.15 TPM= 7.01 Transcript Type= protein_coding
chr5	96662168	96774683	96662168	96774683	+	transcript2382.chr5.nic@CAST	transcript2382.chr5.nic	protein_coding	96662168,96675539,96695836,96722639,96726794,96727489,96729153,96729612,96730780,96736172,96737849,96740038,96741266,96741494,96742655,96746342,96747345,96748518,96750587,96754060,96754658,96757444,96757583,96762274,96765221,96766053,96767438,96767907,96770531,96771644,96772640	96662497,96675601,96695907,96722698,96726859,96727530,96729209,96729725,96730860,96736240,96737947,96740118,96741358,96741580,96742756,96746425,96747392,96748613,96750682,96754161,96754741,96757494,96757654,96762372,96765325,96766145,96767482,96767999,96770602,96771702,96774683	Gene ID= ENSG00000153113.23 TPM= 30.33 Transcript Type= NA
chr5	96662076	96774683	96662076	96774683	+	transcript2398.chr5.nic@CAST	transcript2398.chr5.nic	protein_coding	96662076,96675539,96695836,96722639,96727489,96729153,96729612,96730780,96736172,96737849,96740038,96741266,96741494,96742655,96746342,96747345,96748518,96750587,96754060,96754658,96757444,96757583,96762274,96765221,96766053,96767438,96767907,96770531,96771644,96772640	96662497,96675601,96695907,96722698,96727530,96729209,96729725,96730860,96736240,96737947,96740118,96741358,96741580,96742756,96746425,96747392,96748613,96750682,96754161,96754741,96757494,96757654,96762372,96765325,96766145,96767482,96767999,96770602,96771702,96774683	Gene ID= ENSG00000153113.23 TPM= 33.64 Transcript Type= NA
chr5	96702724	96774683	96702724	96774683	+	transcript2427.chr5.nic@CAST	transcript2427.chr5.nic	protein_coding	96702724,96722639,96727489,96729153,96729612,96730780,96736172,96737849,96740038,96741266,96741494,96742655,96746342,96747345,96748518,96750587,96754060,96754658,96757444,96757583,96762274,96765221,96766053,96767438,96767907,96770531,96771644,96772640	96702915,96722698,96727530,96729209,96729725,96730860,96736240,96737947,96740118,96741358,96741580,96742756,96746425,96747392,96748613,96750682,96754161,96754741,96757494,96757654,96762372,96765325,96766145,96767482,96767999,96770602,96771702,96774683	Gene ID= ENSG00000153113.23 TPM= 18.46 Transcript Type= NA
chr5	96760810	96808100	96760810	96808100	-	ENST00000296754.7@ERAP1	ENST00000296754.7	protein_coding	96807860,96803403,96800862,96797175,96795042,96793803,96793400,96792061,96790512,96790296,96788531,96786470,96785788,96783924,96783051,96781693,96781058,96780423,96776404,96760810	96808100,96803943,96801000,96797309,96795162,96793957,96793513,96792192,96790643,96790367,96788685,96786549,96785971,96784080,96783235,96781854,96781198,96780504,96776551,96763228	Gene ID= ENSG00000164307.12 TPM= 28.02 Transcript Type= protein_coding
chr5	96767798	96807933	96767798	96807933	-	transcript2445.chr5.nnic@ERAP1	transcript2445.chr5.nnic	protein_coding	96807860,96803403,96800862,96797175,96795042,96793803,96793400,96792061,96790512,96790296,96788531,96786470,96785788,96783924,96783051,96781693,96781058,96780423,96776404,96767798	96807933,96803943,96801000,96797309,96795162,96793957,96793513,96792192,96790643,96790367,96788685,96786549,96785971,96784080,96783235,96781854,96781198,96780504,96776551,96768431	Gene ID= ENSG00000164307.12 TPM= 5.84 Transcript Type= NA
chr5	96875939	96919716	96875939	96919716	+	ENST00000437043.7@ERAP2	ENST00000437043.7	protein_coding	96875939,96879564,96883792,96886655,96889185,96892299,96895246,96896373,96896732,96900121,96901506,96902274,96903377,96908961,96909580,96912637,96913317,96915688,96917462	96876527,96880260,96883930,96886789,96889305,96892453,96895359,96896504,96896863,96900189,96901681,96902353,96903560,96909117,96909764,96912798,96913457,96915769,96919716	Gene ID= ENSG00000164308.16 TPM= 30.36 Transcript Type= protein_coding
chr5	97021924	97031906	97021924	97031906	+	transcript2473.chr5.nic@LNPEP	transcript2473.chr5.nic	protein_coding	97021924,97024521,97026617,97027733,97028402	97022484,97024682,97026757,97027814,97031906	Gene ID= ENSG00000113441.15 TPM= 4.67 Transcript Type= NA
chr5	96958451	97029036	96958451	97029036	+	ENST00000395770.3@LNPEP	ENST00000395770.3	protein_coding	96958451,96979138,96985080,96986539,96993015,96993817,96996390,96998014,97003415,97006073,97006427,97013648,97014939,97022300,97024521,97026617,97027733,97028402	96958776,96979978,96985218,96986670,96993135,96993971,96996503,96998145,97003546,97006233,97006515,97013831,97015095,97022484,97024682,97026757,97027814,97029036	Gene ID= ENSG00000113441.15 TPM= 2.34 Transcript Type= protein_coding
chr5	97160867	97183260	97160867	97183260	-	ENST00000283109.7@RIOK2	ENST00000283109.7	protein_coding	97183126,97179055,97177732,97177116,97173175,97171206,97168760,97167467,97165051,97160867	97183260,97179193,97177848,97177291,97173263,97171397,97168852,97167991,97165147,97163225	Gene ID= ENSG00000058729.10 TPM= 10.51 Transcript Type= protein_coding
chr5	98773624	98812283	98773624	98812283	+	transcript2484.chr5.nnic@RGMB	transcript2484.chr5.nnic	protein_coding	98773624,98779580,98810996	98774206,98780088,98812283	Gene ID= ENSG00000174136.11 TPM= 2.34 Transcript Type= NA
chr5	98773635	98794055	98773635	98794055	+	ENST00000513185.1@RGMB	ENST00000513185.1	protein_coding	98773635,98779580,98793085	98774206,98780088,98794055	Gene ID= ENSG00000174136.11 TPM= 9.34 Transcript Type= protein_coding
chr5	98907020	98911145	98907020	98911145	+	transcript2492.chr5.nnic@NA	transcript2492.chr5.nnic	NA	98907020	98911145	Gene ID= novel_gene_chr5_2493 TPM= 4.67 Transcript Type= NA
chr5	98929174	98930812	98929174	98930812	+	transcript2494.chr5.nnic@NA	transcript2494.chr5.nnic	NA	98929174	98930812	Gene ID= novel_gene_chr5_2495 TPM= 3.5 Transcript Type= NA
chr5	100535305	100586741	100535305	100586741	+	ENST00000312637.4@FAM174A	ENST00000312637.4	protein_coding	100535305,100562054,100586181	100535964,100562188,100586741	Gene ID= ENSG00000174132.8 TPM= 47.87 Transcript Type= protein_coding
chr5	100848231	100903300	100848231	100903300	-	transcript2507.chr5.nnic@ST8SIA4	transcript2507.chr5.nnic	protein_coding	100902843,100895654,100886343,100856103,100848231	100903300,100895785,100886600,100856396,100849457	Gene ID= ENSG00000113532.12 TPM= 2.34 Transcript Type= NA
chr5	100852115	100903238	100852115	100903238	-	transcript2509.chr5.nic@ST8SIA4	transcript2509.chr5.nic	protein_coding	100902843,100895654,100886343,100852115	100903238,100895785,100886600,100856396	Gene ID= ENSG00000113532.12 TPM= 2.34 Transcript Type= NA
chr5	100885311	100903214	100885311	100903214	-	ENST00000451528.2@ST8SIA4	ENST00000451528.2	protein_coding	100902843,100895654,100885311	100903214,100895785,100886600	Gene ID= ENSG00000113532.12 TPM= 1.17 Transcript Type= protein_coding
chr5	102233986	102296549	102233986	102296549	-	ENST00000310954.6@SLCO4C1	ENST00000310954.6	protein_coding	102295908,102291343,102270624,102263684,102261912,102260213,102257943,102257115,102249638,102247252,102240718,102239251,102233986	102296549,102291606,102270806,102263780,102262033,102260319,102258087,102257310,102249788,102247442,102240782,102239388,102237018	Gene ID= ENSG00000173930.8 TPM= 38.53 Transcript Type= protein_coding
chr5	102755077	103029713	102755077	103029713	+	transcript2531.chr5.nic@PAM	transcript2531.chr5.nic	protein_coding	102755077,102865823,102867273,102901356,102913934,102924957,102926585,102946837,102948378,102949537,102949902,102950717,102959875,102961158,102974116,102990272,103003033,103005154,103006801,103007457,103009751,103017334,103019790,103025131,103028182,103028887	102755348,102866284,102867393,102901413,102914021,102925042,102926668,102946885,102948445,102949617,102949978,102950820,102960059,102961229,102974436,102990401,103003149,103005226,103007011,103007657,103009866,103017433,103019843,103025334,103028238,103029713	Gene ID= ENSG00000145730.20 TPM= 22.64 Transcript Type= NA
chr5	102755162	103029730	102755162	103029730	+	transcript2537.chr5.nic@PAM	transcript2537.chr5.nic	protein_coding	102755162,102865823,102867273,102901356,102913934,102924957,102926585,102946837,102948378,102949537,102949902,102950717,102959875,102961158,102974116,102990272,103003033,103005154,103006801,103007457,103009751,103017334,103019790,103025131,103028887	102755348,102866284,102867393,102901413,102914021,102925042,102926668,102946885,102948445,102949617,102949978,102950820,102960059,102961229,102974436,102990401,103003149,103005226,103007011,103007657,103009866,103017433,103019843,103025334,103029730	Gene ID= ENSG00000145730.20 TPM= 17.97 Transcript Type= NA
chr5	102755213	103029713	102755213	103029713	+	transcript2539.chr5.nic@PAM	transcript2539.chr5.nic	protein_coding	102755213,102865823,102867273,102901356,102913934,102924957,102926585,102946837,102948378,102949537,102949902,102950717,102959875,102961158,102974116,102990272,103003033,103005154,103006801,103007457,103009751,103017334,103019790,103028182,103028887	102755348,102866284,102867393,102901413,102914021,102925042,102926668,102946885,102948445,102949617,102949978,102950820,102960059,102961229,102974436,102990401,103003149,103005226,103007011,103007657,103009866,103017433,103019843,103028238,103029713	Gene ID= ENSG00000145730.20 TPM= 21.87 Transcript Type= NA
chr5	102755150	103029713	102755150	103029713	+	transcript2544.chr5.nic@PAM	transcript2544.chr5.nic	protein_coding	102755150,102865823,102867273,102901356,102913934,102924957,102926585,102946837,102948378,102949537,102949902,102950717,102959875,102961158,102990272,103003033,103005154,103006801,103007457,103009751,103017334,103019790,103025131,103028182,103028887	102755348,102866284,102867393,102901413,102914021,102925042,102926668,102946885,102948445,102949617,102949978,102950820,102960059,102961229,102990401,103003149,103005226,103007011,103007657,103009866,103017433,103019843,103025334,103028238,103029713	Gene ID= ENSG00000145730.20 TPM= 25.84 Transcript Type= NA
chr5	102755170	103029730	102755170	103029730	+	transcript2552.chr5.nic@PAM	transcript2552.chr5.nic	protein_coding	102755170,102865823,102867273,102901356,102913934,102924957,102926585,102946837,102948378,102949537,102949902,102950717,102959875,102961158,102990272,103003033,103005154,103006801,103007457,103009751,103017334,103019790,103025131,103028887	102755348,102866284,102867393,102901413,102914021,102925042,102926668,102946885,102948445,102949617,102949978,102950820,102960059,102961229,102990401,103003149,103005226,103007011,103007657,103009866,103017433,103019843,103025334,103029730	Gene ID= ENSG00000145730.20 TPM= 20 Transcript Type= NA
chr5	102755077	103029713	102755077	103029713	+	transcript2555.chr5.nic@PAM	transcript2555.chr5.nic	protein_coding	102755077,102865823,102867273,102901356,102913934,102924957,102926585,102946837,102948378,102949537,102949902,102950717,102959875,102961158,102990272,103003033,103005154,103006801,103007457,103009751,103017334,103019790,103028182,103028887	102755348,102866284,102867393,102901413,102914021,102925042,102926668,102946885,102948445,102949617,102949978,102950820,102960059,102961229,102990401,103003149,103005226,103007011,103007657,103009866,103017433,103019843,103028238,103029713	Gene ID= ENSG00000145730.20 TPM= 28.56 Transcript Type= NA
chr5	102865823	103029713	102865823	103029713	+	ENST00000348126.6@PAM	ENST00000348126.6	protein_coding	102865823,102867273,102901356,102913934,102924957,102926585,102946837,102948378,102949537,102949902,102950717,102959875,102961158,102990272,103003033,103005154,103006801,103007457,103009751,103017334,103019790,103025131,103028185,103028887	102866284,102867393,102901413,102914021,102925042,102926668,102946885,102948445,102949617,102949978,102950820,102960059,102961229,102990401,103003149,103005226,103007011,103007657,103009866,103017433,103019843,103025334,103028238,103029713	Gene ID= ENSG00000145730.20 TPM= 33.94 Transcript Type= protein_coding
chr5	103086333	103120151	103086333	103120151	-	ENST00000399004.6@GIN1	ENST00000399004.6	protein_coding	103120064,103108569,103106716,103104541,103097590,103097314,103096541,103086333	103120151,103108714,103106909,103104846,103097781,103097490,103096826,103088172	Gene ID= ENSG00000145723.16 TPM= 2.34 Transcript Type= protein_coding
chr5	103120200	103212799	103120200	103212799	+	ENST00000321521.13@PPIP5K2	ENST00000321521.13	protein_coding	103120200,103129306,103133453,103136732,103138384,103146527,103147931,103149152,103151253,103152648,103153848,103154670,103154834,103155909,103158188,103158452,103159146,103167179,103168072,103173155,103173858,103177667,103177864,103180021,103183234,103184672,103186320,103190842,103194900,103201522	103120488,103129703,103133648,103136822,103138469,103146681,103148032,103149313,103151374,103152749,103153934,103154745,103154943,103155994,103158313,103158573,103159328,103167320,103168295,103173282,103173972,103177774,103177980,103180188,103183407,103184744,103186439,103190982,103195025,103212799	Gene ID= ENSG00000145725.19 TPM= 2.72 Transcript Type= protein_coding
chr5	103120252	103203206	103120252	103203206	+	transcript2580.chr5.nic@PPIP5K2	transcript2580.chr5.nic	protein_coding	103120252,103129306,103133453,103136732,103138384,103146527,103147931,103149152,103151253,103152648,103153848,103154670,103154834,103155909,103158188,103158452,103159146,103167179,103168072,103173155,103173858,103177667,103177864,103180021,103184672,103186320,103187314,103190842,103194900,103201522	103120488,103129703,103133648,103136822,103138469,103146681,103148032,103149313,103151374,103152749,103153934,103154745,103154943,103155994,103158313,103158573,103159328,103167320,103168295,103173282,103173972,103177774,103177980,103180188,103184744,103186439,103187376,103190982,103195025,103203206	Gene ID= ENSG00000145725.19 TPM= 2.72 Transcript Type= NA
chr5	103120252	103203206	103120252	103203206	+	transcript2583.chr5.nic@PPIP5K2	transcript2583.chr5.nic	protein_coding	103120252,103129306,103133453,103136732,103138384,103146527,103147931,103149152,103151253,103152648,103153848,103154670,103154834,103155909,103158188,103158452,103159146,103167179,103168072,103173155,103173858,103177667,103177864,103180021,103184672,103190842,103194900,103201522	103120488,103129703,103133648,103136822,103138469,103146681,103148032,103149313,103151374,103152749,103153934,103154745,103154943,103155994,103158313,103158573,103159328,103167320,103168295,103173282,103173972,103177774,103177980,103180188,103184744,103190982,103195025,103203206	Gene ID= ENSG00000145725.19 TPM= 8.56 Transcript Type= NA
chr5	103183184	103202719	103183184	103202719	+	transcript2587.chr5.nic@PPIP5K2	transcript2587.chr5.nic	protein_coding	103183184,103190842,103194900,103201522	103184744,103190982,103195025,103202719	Gene ID= ENSG00000145725.19 TPM= 7.01 Transcript Type= NA
chr5	103258702	103278660	103258702	103278660	+	ENST00000319933.6@C5orf30	ENST00000319933.6	protein_coding	103258702,103265908,103275897	103258896,103265997,103278660	Gene ID= ENSG00000181751.9 TPM= 5.84 Transcript Type= protein_coding
chr5	103548855	103562810	103548855	103562810	-	transcript2599.chr5.nic@NUDT12	transcript2599.chr5.nic	protein_coding	103562703,103558879,103555931,103554740,103552217,103548855	103562810,103560254,103556098,103554853,103552416,103550971	Gene ID= ENSG00000112874.9 TPM= 3.5 Transcript Type= NA
chr5	103548855	103562793	103548855	103562793	-	ENST00000230792.6@NUDT12	ENST00000230792.6	protein_coding	103562703,103560043,103558879,103555931,103554740,103552217,103548855	103562793,103560254,103559468,103556098,103554853,103552416,103550971	Gene ID= ENSG00000112874.9 TPM= 10.51 Transcript Type= protein_coding
chr5	107670064	107671931	107670064	107671931	+	transcript2603.chr5.nnic@NA	transcript2603.chr5.nnic	NA	107670064	107671931	Gene ID= novel_gene_chr5_2604 TPM= 4.67 Transcript Type= NA
chr5	107859045	108382098	107859045	108382098	-	ENST00000542267.5@FBXL17	ENST00000542267.5	protein_coding	108380699,108367831,108364738,108348399,108224121,108186117,108020925,107881037,107859045	108382098,108367953,108364995,108348530,108224228,108186247,108021001,107881179,107861860	Gene ID= ENSG00000145743.15 TPM= 2.34 Transcript Type= protein_coding
chr5	108297735	108381432	108297735	108381432	-	transcript2610.chr5.nnic@FBXL17	transcript2610.chr5.nnic	protein_coding	108380699,108367831,108364738,108348399,108301976,108297735	108381432,108367953,108364995,108348530,108302060,108299837	Gene ID= ENSG00000145743.15 TPM= 2.34 Transcript Type= NA
chr5	108222673	108380988	108222673	108380988	-	transcript2611.chr5.nic@FBXL17	transcript2611.chr5.nic	protein_coding	108380699,108367831,108364738,108348399,108222673	108380988,108367953,108364995,108348530,108224228	Gene ID= ENSG00000145743.15 TPM= 2.34 Transcript Type= NA
chr5	108297735	108381432	108297735	108381432	-	transcript2612.chr5.nnic@FBXL17	transcript2612.chr5.nnic	protein_coding	108380699,108367831,108364738,108348399,108297735	108381432,108367953,108364995,108348530,108299837	Gene ID= ENSG00000145743.15 TPM= 3.5 Transcript Type= NA
chr5	108728447	108728572	108728447	108728572	+	transcript2614.chr5.nnic@NA	transcript2614.chr5.nnic	NA	108728447	108728572	Gene ID= novel_gene_chr5_2615 TPM= 2.34 Transcript Type= NA
chr5	108747822	109196841	108747822	109196841	+	ENST00000281092.8@FER	ENST00000281092.8	protein_coding	108747822,108768093,108798124,108832770,108835708,108867767,108871365,108872093,108883396,108897659,108946130,108954729,108959225,109037422,109044680,109047104,109100396,109180747,109186200,109187433	108748000,108768238,108798389,108832943,108835807,108867950,108871502,108872212,108883518,108897848,108946222,108954932,108959347,109037478,109044795,109047198,109100519,109180901,109186322,109196841	Gene ID= ENSG00000151422.12 TPM= 1.17 Transcript Type= protein_coding
chr5	108748951	109190785	108748951	109190785	+	transcript2622.chr5.nnic@FER	transcript2622.chr5.nnic	protein_coding	108748951,108768093,108798124,108867767,108871365,108872093,108883396,108897659,108946130,108954729,108959225,109037422,109044680,109047104,109100396,109180747,109186200,109187433,109188280	108748993,108768238,108798389,108867950,108871502,108872212,108883518,108897848,108946222,108954932,108959347,109037478,109044795,109047198,109100519,109180901,109186322,109188121,109190785	Gene ID= ENSG00000151422.12 TPM= 4.67 Transcript Type= NA
chr5	108897648	109187672	108897648	109187672	+	ENST00000438717.6@FER	ENST00000438717.6	protein_coding	108897648,108946130,108954729,108959225,109037422,109044680,109047104,109100396,109180747,109186200,109187433	108897848,108946222,108954932,108959347,109037478,109044795,109047198,109100519,109180901,109186322,109187672	Gene ID= ENSG00000151422.12 TPM= 1.17 Transcript Type= protein_coding
chr5	109334709	109409994	109334709	109409994	-	ENST00000361189.6@PJA2	ENST00000361189.6	protein_coding	109409842,109383403,109381503,109378204,109368561,109362840,109355915,109344705,109344190,109334709	109409994,109383520,109381703,109379254,109368746,109363022,109356026,109344819,109344311,109337356	Gene ID= ENSG00000198961.9 TPM= 275.17 Transcript Type= protein_coding
chr5	109406235	109409832	109406235	109409832	+	transcript2640.chr5.nnic@NA	transcript2640.chr5.nnic	NA	109406235	109409832	Gene ID= novel_gene_chr5_2641 TPM= 2.34 Transcript Type= NA
chr5	109687800	109689644	109687800	109689644	-	transcript2651.chr5.nnic@NA	transcript2651.chr5.nnic	NA	109687800	109689644	Gene ID= novel_gene_chr5_2652 TPM= 2.34 Transcript Type= NA
chr5	109689718	109847773	109689718	109847773	+	transcript2649.chr5.nic@MAN2A1	transcript2649.chr5.nic	protein_coding	109689718,109713520,109716120,109729342,109755329,109767535,109770355,109774788,109781396,109784744,109788934,109789460,109817273,109819669,109820220,109823723,109842328,109845865,109847657	109690552,109713774,109716264,109729513,109755456,109767708,109770541,109774965,109781598,109784926,109789048,109789527,109817438,109819887,109820342,109823837,109842461,109846006,109847773	Gene ID= ENSG00000112893.9 TPM= 2.34 Transcript Type= NA
chr5	109689366	109867178	109689366	109867178	+	ENST00000261483.4@MAN2A1	ENST00000261483.4	protein_coding	109689366,109713520,109716120,109729342,109755329,109767535,109770355,109774788,109781396,109784744,109788934,109789460,109817273,109819669,109820220,109823723,109842328,109845865,109847657,109855140,109865036,109866846	109690552,109713774,109716264,109729513,109755456,109767708,109770541,109774965,109781598,109784926,109789048,109789527,109817438,109819887,109820342,109823837,109842461,109846006,109847790,109855334,109865146,109867178	Gene ID= ENSG00000112893.9 TPM= 52.54 Transcript Type= protein_coding
chr5	110738994	110762784	110738994	110762784	+	ENST00000355943.7@SLC25A46	ENST00000355943.7	protein_coding	110738994,110742047,110743730,110746269,110748163,110755465,110756702,110761204	110739402,110742089,110743787,110746346,110748263,110755521,110756759,110762784	Gene ID= ENSG00000164209.16 TPM= 11.68 Transcript Type= protein_coding
chr5	110753302	110765161	110753302	110765161	+	ENST00000513706.2@SLC25A46	ENST00000513706.2	protein_coding	110753302,110756702,110761204	110755521,110756759,110765161	Gene ID= ENSG00000164209.16 TPM= 3.5 Transcript Type= processed_transcript
chr5	111073314	111078024	111073314	111078024	+	ENST00000379706.4@TSLP	ENST00000379706.4	protein_coding	111073314,111075946	111073645,111078024	Gene ID= ENSG00000145777.14 TPM= 1.17 Transcript Type= protein_coding
chr5	111092314	111127192	111092314	111127192	+	ENST00000513710.3@WDR36	ENST00000513710.3	protein_coding	111092314,111094920,111097079,111098722,111100589,111102345,111103786,111104177,111104697,111105295,111106057,111107294,111110189,111110788,111111170,111113074,111119013,111120496,111120996,111123805,111124108,111125608,111126734	111092618,111094947,111097179,111098839,111100721,111102399,111103918,111104352,111104817,111105360,111106143,111107439,111110303,111110953,111111278,111113153,111119120,111120593,111121141,111123924,111124189,111125795,111127192	Gene ID= ENSG00000134987.11 TPM= 3.5 Transcript Type= protein_coding
chr5	111496033	111512554	111496033	111512554	-	transcript2679.chr5.nic@STARD4	transcript2679.chr5.nic	protein_coding	111512385,111506330,111501962,111501002,111496033	111512554,111506379,111502088,111501116,111500106	Gene ID= ENSG00000164211.12 TPM= 9.34 Transcript Type= NA
chr5	111496037	111512577	111496037	111512577	-	transcript2684.chr5.nnic@STARD4	transcript2684.chr5.nnic	protein_coding	111512385,111507329,111506330,111500267,111496037	111512577,111507442,111506379,111501116,111500106	Gene ID= ENSG00000164211.12 TPM= 4.67 Transcript Type= NA
chr5	111500147	111512590	111500147	111512590	-	ENST00000502322.5@STARD4	ENST00000502322.5	protein_coding	111512385,111507329,111506330,111501962,111500147	111512590,111507442,111506379,111502088,111501116	Gene ID= ENSG00000164211.12 TPM= 1.17 Transcript Type= protein_coding
chr5	111503722	111506216	111503722	111506216	+	transcript2697.chr5.nnic@NA	transcript2697.chr5.nnic	NA	111503722	111506216	Gene ID= novel_gene_chr5_2698 TPM= 52.54 Transcript Type= NA
chr5	111729296	111757258	111729296	111757258	-	ENST00000257435.11@NREP	ENST00000257435.11	protein_coding	111757136,111755770,111735430,111729296	111757258,111755830,111735507,111731046	Gene ID= ENSG00000134986.13 TPM= 4.67 Transcript Type= protein_coding
chr5	112142441	112419914	112142441	112419914	-	transcript2704.chr5.nnic@EPB41L4A	transcript2704.chr5.nnic	protein_coding	112419759,112418941,112307386,112280272,112275326,112266233,112264896,112262494,112259891,112259229,112240719,112239660,112234634,112209892,112205421,112204375,112195661,112194568,112184016,112170945,112170301,112168995,112168739,112145881,112142441	112419914,112419362,112307490,112280323,112275404,112266330,112265016,112262581,112259979,112259292,112240810,112239737,112234755,112209982,112205504,112204488,112195708,112194645,112184135,112170992,112170369,112169105,112168820,112145998,112143880	Gene ID= ENSG00000129595.12 TPM= 2.92 Transcript Type= NA
chr5	112142441	112419907	112142441	112419907	-	transcript2707.chr5.nnic@EPB41L4A	transcript2707.chr5.nnic	protein_coding	112418941,112307386,112280272,112275326,112266233,112264896,112262494,112259891,112259229,112240719,112239660,112234634,112209892,112205421,112204375,112195661,112194568,112184016,112170945,112170301,112168995,112168739,112145881,112142441	112419907,112307490,112280323,112275404,112266330,112265016,112262581,112259979,112259292,112240810,112239737,112234755,112209982,112205504,112204488,112195708,112194645,112184135,112170992,112170369,112169105,112168820,112145998,112143880	Gene ID= ENSG00000129595.12 TPM= 3.3 Transcript Type= NA
chr5	112142442	112420175	112142442	112420175	-	transcript2708.chr5.nnic@EPB41L4A	transcript2708.chr5.nnic	protein_coding	112418941,112307386,112280272,112275326,112266233,112264896,112262494,112259891,112259229,112240719,112239660,112234634,112209892,112205421,112204375,112195661,112194568,112184016,112170945,112170301,112168995,112168739,112145881,112142442	112420175,112307490,112280323,112275404,112266330,112265016,112262581,112259979,112259292,112240810,112239737,112234755,112209982,112205504,112204488,112195708,112194645,112184135,112170992,112170369,112169105,112168820,112145998,112143849	Gene ID= ENSG00000129595.12 TPM= 2.72 Transcript Type= NA
chr5	112160526	112164276	112160526	112164276	+	ENST00000413221.6@EPB41L4A-AS1	ENST00000413221.6	lincRNA	112160526,112161703,112162151	112161295,112161775,112164276	Gene ID= ENSG00000224032.6 TPM= 22.18 Transcript Type= lincRNA
chr5	112163678	112167138	112163678	112167138	+	transcript2725.chr5.nnic@NA	transcript2725.chr5.nnic	NA	112163678	112167138	Gene ID= novel_gene_chr5_2726 TPM= 5.84 Transcript Type= NA
chr5	112419583	112420978	112419583	112420978	+	ENST00000623705.1@EPB41L4A-AS2	ENST00000623705.1	lincRNA	112419583	112420978	Gene ID= ENSG00000278921.2 TPM= 5.84 Transcript Type= lincRNA
chr5	112861222	112869788	112861222	112869788	+	ENST00000505459.5@SRP19	ENST00000505459.5	protein_coding	112861222,112862508,112864457,112864621,112867404	112861417,112862583,112864528,112864732,112869788	Gene ID= ENSG00000153037.13 TPM= 28.02 Transcript Type= protein_coding
chr5	112861305	112867935	112861305	112867935	+	ENST00000282999.7@SRP19	ENST00000282999.7	protein_coding	112861305,112862508,112864457,112864621,112867372	112861417,112862583,112864528,112864732,112867935	Gene ID= ENSG00000153037.13 TPM= 4.67 Transcript Type= protein_coding
chr5	112876379	112922539	112876379	112922539	-	ENST00000379638.8@REEP5	ENST00000379638.8	protein_coding	112922073,112921163,112902380,112887015,112876379	112922539,112921256,112902518,112887183,112878835	Gene ID= ENSG00000129625.12 TPM= 262.71 Transcript Type= protein_coding
chr5	112976706	112984656	112976706	112984656	+	transcript2755.chr5.nnic@DCP2	transcript2755.chr5.nnic	protein_coding	112976706,112981042,112983974	112976986,112981171,112984656	Gene ID= ENSG00000172795.15 TPM= 3.5 Transcript Type= NA
chr5	112976736	113020970	112976736	113020970	+	ENST00000389063.2@DCP2	ENST00000389063.2	protein_coding	112976736,112985835,112992121,112992672,113001084,113001357,113001567,113003942,113007938,113010756,113013321	112976986,112985986,112992248,112992770,113001236,113001469,113001674,113004077,113008042,113010807,113020970	Gene ID= ENSG00000172795.15 TPM= 18.68 Transcript Type= protein_coding
chr5	112994153	112997701	112994153	112997701	-	transcript2758.chr5.nnic@NA	transcript2758.chr5.nnic	NA	112994153	112997701	Gene ID= novel_gene_chr5_2759 TPM= 3.5 Transcript Type= NA
chr5	113022099	113294949	113022099	113294949	-	ENST00000302475.8@MCC	ENST00000302475.8	protein_coding	113294329,113151309,113143218,113122684,113104192,113101739,113085164,113084101,113082860,113071094,113068080,113063984,113053725,113049093,113043530,113028934,113022099	113294949,113151422,113143360,113122826,113104355,113101945,113085310,113084190,113083008,113071234,113068183,113064167,113053959,113049299,113043630,113029056,113027482	Gene ID= ENSG00000171444.17 TPM= 19.85 Transcript Type= protein_coding
chr5	113513683	113595284	113513683	113595284	+	ENST00000161863.8@YTHDC2	ENST00000161863.8	protein_coding	113513683,113515272,113524981,113526586,113532879,113534305,113535642,113539074,113540968,113542368,113548541,113548955,113553181,113553590,113553767,113553942,113556052,113561080,113563373,113563859,113565893,113567092,113567654,113579586,113581417,113584302,113591041,113591996,113593303,113593482	113514082,113515362,113525177,113526785,113533045,113534407,113535798,113539181,113541116,113542503,113548667,113549020,113553359,113553686,113553854,113554022,113556134,113561185,113563492,113564131,113566019,113567297,113567849,113579695,113581709,113584479,113591244,113592178,113593390,113595284	Gene ID= ENSG00000047188.15 TPM= 11.09 Transcript Type= protein_coding
chr5	113513694	113594123	113513694	113594123	+	transcript2772.chr5.nic@YTHDC2	transcript2772.chr5.nic	protein_coding	113513694,113515272,113524981,113526586,113532879,113534305,113535642,113539074,113540968,113542368,113548541,113548955,113553181,113553590,113553767,113553942,113556052,113561080,113563373,113563859,113565893,113567092,113567654,113579586,113581417,113584302,113591041,113591996,113593303	113514082,113515362,113525177,113526785,113533045,113534407,113535798,113539181,113541116,113542503,113548667,113549020,113553359,113553686,113553854,113554022,113556134,113561185,113563492,113564131,113566019,113567297,113567849,113579695,113581709,113584479,113591244,113592178,113594123	Gene ID= ENSG00000047188.15 TPM= 2.92 Transcript Type= NA
chr5	114360945	114496500	114360945	114496500	+	ENST00000512097.7@KCNN2	ENST00000512097.7	protein_coding	114360945,114361964,114363906,114404438,114463049,114473054,114487050,114493403,114495895	114361150,114363261,114364001,114404856,114463190,114473164,114487177,114493472,114496500	Gene ID= ENSG00000080709.14 TPM= 9.34 Transcript Type= protein_coding
chr5	115124763	115169961	115124763	115169961	-	ENST00000513154.5@TRIM36	ENST00000513154.5	protein_coding	115169608,115163518,115147069,115144598,115141279,115137363,115137000,115133860,115130592,115124763	115169961,115163752,115147394,115144744,115141374,115137616,115137124,115134147,115130889,115126857	Gene ID= ENSG00000152503.9 TPM= 2.34 Transcript Type= protein_coding
chr5	115267188	115296831	115267188	115296831	-	ENST00000379611.9@CCDC112	ENST00000379611.9	protein_coding	115296427,115284787,115279647,115276965,115275994,115275216,115271213,115269703,115268882,115267188	115296831,115284908,115279768,115277054,115276069,115275606,115271626,115269798,115269000,115267918	Gene ID= ENSG00000164221.12 TPM= 1.17 Transcript Type= protein_coding
chr5	115520908	115544894	115520908	115544894	-	ENST00000274457.4@FEM1C	ENST00000274457.4	protein_coding	115544523,115542950,115520908	115544894,115543683,115525617	Gene ID= ENSG00000145780.7 TPM= 8.17 Transcript Type= protein_coding
chr5	115578642	115626161	115578642	115626161	-	ENST00000282382.8@TMED7-TICAM2	ENST00000282382.8	protein_coding	115625601,115620435,115616318,115578642	115626161,115620680,115616445,115581197	Gene ID= ENSG00000251201.8 TPM= 1.95 Transcript Type= protein_coding
chr5	115578651	115626014	115578651	115626014	-	ENST00000333314.3@TMED7-TICAM2	ENST00000333314.3	protein_coding	115625601,115620435,115616318,115578651	115626014,115620680,115616445,115581315	Gene ID= ENSG00000251201.8 TPM= 4.29 Transcript Type= protein_coding
chr5	115578650	115602479	115578650	115602479	-	ENST00000427199.2@TICAM2	ENST00000427199.2	protein_coding	115602097,115578650	115602479,115581315	Gene ID= ENSG00000243414.5 TPM= 5.45 Transcript Type= protein_coding
chr5	115610907	115615475	115610907	115615475	-	transcript2816.chr5.nnic@NA	transcript2816.chr5.nnic	NA	115610907	115615475	Gene ID= novel_gene_chr5_2817 TPM= 7.01 Transcript Type= NA
chr5	115613508	115626173	115613508	115626173	-	ENST00000456936.3@TMED7	ENST00000456936.3	protein_coding	115625601,115620435,115613508	115626173,115620680,115616445	Gene ID= ENSG00000134970.13 TPM= 127.27 Transcript Type= protein_coding
chr5	115804733	115816954	115804733	115816954	-	ENST00000250535.4@CDO1	ENST00000250535.4	protein_coding	115816228,115813181,115811161,115806349,115804733	115816954,115813258,115811315,115806518,115805462	Gene ID= ENSG00000129596.4 TPM= 7.01 Transcript Type= protein_coding
chr5	115828200	115841858	115828200	115841858	-	ENST00000509910.1@ATG12	ENST00000509910.1	protein_coding	115841390,115837628,115832602,115828200	115841858,115837764,115832664,115831863	Gene ID= ENSG00000145782.12 TPM= 7.01 Transcript Type= protein_coding
chr5	115841481	115914081	115841481	115914081	+	ENST00000316788.11@AP3S1	ENST00000316788.11	protein_coding	115841481,115866670,115870017,115895087,115902885,115913362	115842106,115866761,115870128,115895158,115902992,115914081	Gene ID= ENSG00000177879.15 TPM= 101.58 Transcript Type= protein_coding
chr5	115841932	115914081	115841932	115914081	+	transcript2829.chr5.nnic@AP3S1	transcript2829.chr5.nnic	protein_coding	115841932,115866670,115870017,115902885,115913362	115842106,115866761,115870128,115902992,115914081	Gene ID= ENSG00000177879.15 TPM= 3.5 Transcript Type= NA
chr5	115841928	115914081	115841928	115914081	+	transcript2830.chr5.nic@AP3S1	transcript2830.chr5.nic	protein_coding	115841928,115866670,115895087,115902885,115913362	115842106,115866761,115895158,115902992,115914081	Gene ID= ENSG00000177879.15 TPM= 3.5 Transcript Type= NA
chr5	116084648	116085432	116084648	116085432	-	transcript2863.chr5.nnic@NA	transcript2863.chr5.nnic	NA	116084648	116085432	Gene ID= novel_gene_chr5_2864 TPM= 2.34 Transcript Type= NA
chr5	116085026	116293286	116085026	116293286	+	ENST00000632434.1@COMMD10	ENST00000632434.1	protein_coding	116085026,116087497,116091079,116092545,116134068,116291517,116292451	116085093,116087587,116091189,116092700,116134178,116291576,116293286	Gene ID= ENSG00000145781.8 TPM= 38.53 Transcript Type= protein_coding
chr5	116443616	116574934	116443616	116574934	-	ENST00000343348.10@SEMA6A	ENST00000343348.10	protein_coding	116574185,116504845,116502210,116497327,116496251,116495413,116491740,116488888,116488108,116486749,116482444,116480122,116478542,116478014,116477846,116475545,116473073,116467583,116443616	116574934,116504982,116502327,116497387,116496313,116495514,116491830,116489007,116488196,116486966,116482575,116480277,116478718,116478154,116477926,116475603,116473093,116467747,116447811	Gene ID= ENSG00000092421.16 TPM= 12.84 Transcript Type= protein_coding
chr5	118836077	118839164	118836077	118839164	-	transcript2870.chr5.nnic@NA	transcript2870.chr5.nnic	NA	118836077	118839164	Gene ID= novel_gene_chr5_2871 TPM= 4.67 Transcript Type= NA
chr5	119071115	119135833	119071115	119135833	+	transcript2875.chr5.nic@DMXL1	transcript2875.chr5.nic	protein_coding	119071115,119097979,119101935,119105180,119110151,119114475,119116158,119118815,119120971,119129211,119133132,119133494	119071656,119098104,119102006,119105258,119110283,119114541,119116336,119119004,119121139,119129423,119133385,119135833	Gene ID= ENSG00000172869.14 TPM= 6.42 Transcript Type= NA
chr5	119354314	119399688	119354314	119399688	+	ENST00000504771.2@TNFAIP8	ENST00000504771.2	protein_coding	119354314,119392816	119356121,119399688	Gene ID= ENSG00000145779.7 TPM= 1.17 Transcript Type= protein_coding
chr5	119452492	119542332	119452492	119542332	+	transcript2912.chr5.nic@HSD17B4	transcript2912.chr5.nic	protein_coding	119452492,119456315,119473908,119474401,119475706,119475824,119477417,119478834,119489192,119492100,119496543,119499317,119502041,119506818,119509141,119514981,119525216,119525917,119527133,119529894,119531266,119536423,119541905	119452633,119456368,119474015,119474460,119475727,119475870,119477501,119479021,119489283,119493946,119496646,119499553,119502092,119506889,119509244,119515046,119525285,119526023,119527219,119529980,119531404,119536550,119542332	Gene ID= ENSG00000133835.14 TPM= 13.43 Transcript Type= NA
chr5	119452497	119542252	119452497	119542252	+	ENST00000515320.5@HSD17B4	ENST00000515320.5	protein_coding	119452497,119473908,119474401,119475706,119475824,119477417,119478834,119489192,119492100,119493818,119496543,119499317,119502041,119506818,119509141,119514981,119525216,119525917,119527133,119529894,119531266,119536423,119541905	119452633,119474015,119474460,119475727,119475870,119477501,119479021,119489283,119492124,119493946,119496646,119499553,119502092,119506889,119509244,119515046,119525285,119526023,119527219,119529980,119531404,119536550,119542252	Gene ID= ENSG00000133835.14 TPM= 2.18 Transcript Type= protein_coding
chr5	119452524	119530870	119452524	119530870	+	transcript2915.chr5.nic@HSD17B4	transcript2915.chr5.nic	protein_coding	119452524,119456315,119473908,119474401,119475706,119475824,119477417,119478834,119489192,119492100,119493818,119496543,119499317,119502041,119506818,119509141,119514981,119525216,119525917,119527133,119529894	119452633,119456368,119474015,119474460,119475727,119475870,119477501,119479021,119489283,119492124,119493946,119496646,119499553,119502092,119506889,119509244,119515046,119525285,119526023,119527219,119530870	Gene ID= ENSG00000133835.14 TPM= 11.09 Transcript Type= NA
chr5	119452443	119542333	119452443	119542333	+	ENST00000256216.10@HSD17B4	ENST00000256216.10	protein_coding	119452443,119456315,119473908,119474401,119475706,119475824,119477417,119478834,119489192,119492100,119493818,119496543,119499317,119502041,119506818,119509141,119514981,119525216,119525917,119527133,119529894,119531266,119536423,119541905	119452633,119456368,119474015,119474460,119475727,119475870,119477501,119479021,119489283,119492124,119493946,119496646,119499553,119502092,119506889,119509244,119515046,119525285,119526023,119527219,119529980,119531404,119536550,119542333	Gene ID= ENSG00000133835.14 TPM= 242.86 Transcript Type= protein_coding
chr5	119452538	119542269	119452538	119542269	+	ENST00000510025.5@HSD17B4	ENST00000510025.5	protein_coding	119452538,119456315,119471636,119473908,119474401,119475706,119475824,119477417,119478834,119489192,119492100,119493818,119496543,119499317,119502041,119506818,119509141,119514981,119525216,119525917,119527133,119529894,119531266,119536423,119541905	119452633,119456368,119471700,119474015,119474460,119475727,119475870,119477501,119479021,119489283,119492124,119493946,119496646,119499553,119502092,119506889,119509244,119515046,119525285,119526023,119527219,119529980,119531404,119536550,119542269	Gene ID= ENSG00000133835.14 TPM= 2.18 Transcript Type= protein_coding
chr5	119487242	119490027	119487242	119490027	-	transcript2920.chr5.nnic@NA	transcript2920.chr5.nnic	NA	119487242	119490027	Gene ID= novel_gene_chr5_2921 TPM= 2.34 Transcript Type= NA
chr5	122032267	122034116	122032267	122034116	-	transcript2928.chr5.nnic@NA	transcript2928.chr5.nnic	NA	122032267	122034116	Gene ID= novel_gene_chr5_2929 TPM= 3.5 Transcript Type= NA
chr5	122063195	122078285	122063195	122078285	-	ENST00000231004.4@LOX	ENST00000231004.4	protein_coding	122077355,122076893,122075404,122074013,122070494,122070053,122063195	122078285,122077001,122075541,122074169,122070589,122070168,122066749	Gene ID= ENSG00000113083.13 TPM= 18.68 Transcript Type= protein_coding
chr5	122774996	122830108	122774996	122830108	+	ENST00000379516.6@SNX2	ENST00000379516.6	protein_coding	122774996,122795266,122799692,122801869,122802081,122803472,122808277,122815896,122816915,122817280,122818818,122826050,122827379,122827575,122829598	122775211,122795383,122799855,122801935,122802124,122803613,122808355,122815971,122817028,122817373,122819023,122826193,122827459,122827646,122830108	Gene ID= ENSG00000205302.6 TPM= 161.13 Transcript Type= protein_coding
chr5	122845617	123012701	122845617	123012701	+	transcript2957.chr5.nnic@SNX24	transcript2957.chr5.nnic	protein_coding	122845617,122936734,122946055,122999912,123001405,123001940,123007682,123011002	122845693,122936817,122946159,123000006,123001437,123002004,123007745,123012701	Gene ID= ENSG00000064652.10 TPM= 2.34 Transcript Type= NA
chr5	122845449	123009212	122845449	123009212	+	ENST00000261369.8@SNX24	ENST00000261369.8	protein_coding	122845449,122936734,122946055,122999912,123001405,123001940,123007682	122845693,122936817,122946159,123000006,123001437,123002004,123009212	Gene ID= ENSG00000064652.10 TPM= 10.51 Transcript Type= protein_coding
chr5	122845626	123002142	122845626	123002142	+	ENST00000506996.5@SNX24	ENST00000506996.5	protein_coding	122845626,122936734,122946055,122999912,123001405,123001940	122845693,122936817,122946159,123000006,123001437,123002142	Gene ID= ENSG00000064652.10 TPM= 1.17 Transcript Type= protein_coding
chr5	123005358	123009203	123005358	123009203	+	transcript2965.chr5.nnic@NA	transcript2965.chr5.nnic	NA	123005358	123009203	Gene ID= novel_gene_chr5_2966 TPM= 5.84 Transcript Type= NA
chr5	123023250	123036741	123023250	123036741	-	ENST00000306442.4@PPIC	ENST00000306442.4	protein_coding	123036509,123029305,123028775,123025784,123023250	123036741,123029418,123028868,123025968,123024003	Gene ID= ENSG00000168938.5 TPM= 2.34 Transcript Type= protein_coding
chr5	123023383	123036727	123023383	123036727	-	transcript2974.chr5.nic@PPIC	transcript2974.chr5.nic	protein_coding	123036509,123028775,123025784,123023383	123036727,123029418,123025968,123024003	Gene ID= ENSG00000168938.5 TPM= 3.5 Transcript Type= NA
chr5	123345003	123423358	123345003	123423358	-	transcript2985.chr5.nnic@CEP120	transcript2985.chr5.nnic	protein_coding	123423281,123422950,123418359,123416010,123412399,123399136,123393300,123391110,123389924,123388432,123386518,123384951,123382986,123382737,123382111,123378336,123377374,123372650,123364496,123349944,123345003	123423358,123423030,123418515,123416124,123412540,123399284,123393497,123391337,123390140,123388606,123386667,123385133,123383082,123382889,123382200,123378428,123377535,123372772,123364594,123350089,123346753	Gene ID= ENSG00000168944.15 TPM= 2.34 Transcript Type= NA
chr5	123400368	123423386	123400368	123423386	-	transcript2995.chr5.nnic@CEP120	transcript2995.chr5.nnic	protein_coding	123422950,123418359,123416010,123412399,123400368	123423386,123418515,123416124,123412540,123403014	Gene ID= ENSG00000168944.15 TPM= 2.34 Transcript Type= NA
chr5	123344885	123423303	123344885	123423303	-	ENST00000306467.9@CEP120	ENST00000306467.9	protein_coding	123422950,123418359,123416010,123412399,123399136,123393300,123391110,123389924,123388432,123386518,123384951,123382986,123382737,123382111,123378336,123377374,123372650,123364496,123349944,123344885	123423303,123418515,123416124,123412540,123399284,123393497,123391337,123390140,123388606,123386667,123385133,123383082,123382889,123382200,123378428,123377535,123372772,123364594,123350089,123346753	Gene ID= ENSG00000168944.15 TPM= 12.84 Transcript Type= protein_coding
chr5	123512262	123616752	123512262	123616752	+	transcript2998.chr5.nic@CSNK1G3	transcript2998.chr5.nic	protein_coding	123512262,123545417,123553107,123557495,123573393,123575729,123588068,123588427,123590413,123591319,123595039,123604724,123605339,123614342	123512570,123545841,123553147,123557564,123573541,123575963,123588153,123588511,123590558,123591414,123595134,123604830,123605362,123616752	Gene ID= ENSG00000151292.17 TPM= 2.34 Transcript Type= NA
chr5	123512099	123617040	123512099	123617040	+	ENST00000345990.8@CSNK1G3	ENST00000345990.8	protein_coding	123512099,123545417,123553107,123557495,123573393,123575729,123588068,123588427,123590413,123591319,123604724,123605339,123614342	123512570,123545841,123553147,123557564,123573541,123575963,123588153,123588511,123590558,123591414,123604830,123605362,123617040	Gene ID= ENSG00000151292.17 TPM= 10.51 Transcript Type= protein_coding
chr5	124720220	124721970	124720220	124721970	+	transcript3012.chr5.nnic@NA	transcript3012.chr5.nnic	NA	124720220	124721970	Gene ID= novel_gene_chr5_3013 TPM= 4.67 Transcript Type= NA
chr5	126423146	126494371	126423146	126494371	+	ENST00000285689.7@GRAMD2B	ENST00000285689.7	protein_coding	126423146,126465426,126469677,126472238,126473265,126477692,126480456,126480627,126483463,126484402,126485686,126486873,126488799,126492915	126423689,126465545,126469788,126472304,126473368,126477787,126480527,126480707,126483574,126484524,126485773,126486977,126488892,126494371	Gene ID= ENSG00000155324.9 TPM= 8.17 Transcript Type= protein_coding
chr5	126541841	126595418	126541841	126595418	-	ENST00000409134.7@ALDH7A1	ENST00000409134.7	protein_coding	126595007,126593351,126592664,126583932,126582851,126577079,126575420,126570782,126568259,126561083,126559240,126555931,126554287,126552021,126550196,126549929,126546324,126541841	126595418,126593404,126592729,126584012,126582974,126577211,126575464,126570859,126568356,126561124,126559334,126556015,126554393,126552137,126550293,126550002,126546399,126545019	Gene ID= ENSG00000164904.17 TPM= 4.67 Transcript Type= protein_coding
chr5	126544153	126595362	126544153	126595362	-	ENST00000636808.1@ALDH7A1	ENST00000636808.1	protein_coding	126595007,126593351,126592664,126583932,126582851,126577079,126575420,126570782,126568259,126561083,126559240,126555931,126554287,126552021,126550196,126549929,126546324,126544153	126595362,126593447,126592729,126584012,126582974,126577211,126575464,126570859,126568356,126561124,126559334,126556015,126554393,126552137,126550293,126550002,126546399,126545019	Gene ID= ENSG00000164904.17 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr5	126544757	126562422	126544757	126562422	-	ENST00000497231.7@ALDH7A1	ENST00000497231.7	protein_coding	126561083,126559240,126555931,126554287,126552021,126550196,126549929,126546324,126544757	126562422,126559334,126556015,126554393,126552137,126550293,126550002,126546399,126545019	Gene ID= ENSG00000164904.17 TPM= 1.17 Transcript Type= retained_intron
chr5	126600922	126627252	126600922	126627252	+	transcript3037.chr5.nnic@PHAX	transcript3037.chr5.nnic	protein_coding	126600922,126603570,126608364,126617250,126624575,126625754	126601058,126604183,126608484,126617333,126625526,126627252	Gene ID= ENSG00000164902.13 TPM= 5.84 Transcript Type= NA
chr5	126600268	126627252	126600268	126627252	+	ENST00000297540.4@PHAX	ENST00000297540.4	protein_coding	126600268,126603570,126608364,126617250,126624575	126601058,126604183,126608484,126617333,126627252	Gene ID= ENSG00000164902.13 TPM= 3.5 Transcript Type= protein_coding
chr5	126867714	127030808	126867714	127030808	-	ENST00000308660.5@MARCH3	ENST00000308660.5	protein_coding	127030350,126917984,126914930,126878185,126867714	127030808,126918227,126915134,126878394,126870791	Gene ID= ENSG00000173926.5 TPM= 2.34 Transcript Type= protein_coding
chr5	127051304	127073492	127051304	127073492	-	ENST00000296662.9@C5orf63	ENST00000296662.9	protein_coding	127073451,127071584,127058882,127052613,127051304	127073492,127071685,127059002,127052669,127051947	Gene ID= ENSG00000164241.13 TPM= 3.5 Transcript Type= protein_coding
chr5	127517609	127555089	127517609	127555089	+	ENST00000296666.12@PRRC1	ENST00000296666.12	protein_coding	127517609,127523460,127524531,127526618,127530294,127533623,127539040,127547819,127551707	127517776,127523582,127524920,127526778,127530396,127533786,127539143,127547921,127555089	Gene ID= ENSG00000164244.20 TPM= 72.39 Transcript Type= protein_coding
chr5	128021528	128083074	128021528	128083074	-	ENST00000501702.6@LINC01184	ENST00000501702.6	lincRNA	128082970,128061144,128021528	128083074,128061244,128024298	Gene ID= ENSG00000245937.7 TPM= 1.17 Transcript Type= lincRNA
chr5	128083766	128189688	128083766	128189688	+	ENST00000262461.6@SLC12A2	ENST00000262461.6	protein_coding	128083766,128112814,128114212,128114586,128131067,128134165,128135700,128138597,128138824,128141830,128147622,128148754,128149997,128151241,128152706,128158053,128161660,128167761,128171667,128174541,128177105,128178567,128180883,128182855,128184366,128184789,128186496	128084710,128112933,128114287,128114681,128131206,128134275,128135808,128138724,128138908,128141981,128147729,128148877,128150098,128151396,128152805,128158164,128161800,128167867,128171746,128174666,128177152,128178689,128180994,128182941,128184501,128184856,128189688	Gene ID= ENSG00000064651.13 TPM= 7.01 Transcript Type= protein_coding
chr5	129092925	129095200	129092925	129095200	-	transcript3093.chr5.nnic@NA	transcript3093.chr5.nnic	NA	129092925	129095200	Gene ID= novel_gene_chr5_3094 TPM= 2.34 Transcript Type= NA
chr5	129094751	129114028	129094751	129114028	+	ENST00000173527.5@ISOC1	ENST00000173527.5	protein_coding	129094751,129104956,129105185,129106946,129112855	129095075,129105075,129105388,129107062,129114028	Gene ID= ENSG00000066583.11 TPM= 79.4 Transcript Type= protein_coding
chr5	129096073	129096848	129096073	129096848	-	transcript3091.chr5.nnic@NA	transcript3091.chr5.nnic	NA	129096073	129096848	Gene ID= novel_gene_chr5_3092 TPM= 2.34 Transcript Type= NA
chr5	129904465	129909931	129904465	129909931	+	transcript3096.chr5.nic@CHSY3	transcript3096.chr5.nic	protein_coding	129904465,129908077	129905631,129909931	Gene ID= ENSG00000198108.3 TPM= 3.5 Transcript Type= NA
chr5	130184227	130186533	130184227	130186533	+	transcript3098.chr5.nnic@NA	transcript3098.chr5.nnic	NA	130184227	130186533	Gene ID= novel_gene_chr5_3099 TPM= 5.84 Transcript Type= NA
chr5	131159027	131165485	131159027	131165485	-	ENST00000304043.9@HINT1	ENST00000304043.9	protein_coding	131165095,131162572,131159027	131165485,131162676,131159611	Gene ID= ENSG00000169567.11 TPM= 136.61 Transcript Type= protein_coding
chr5	131170810	131205426	131170810	131205426	+	ENST00000379380.8@LYRM7	ENST00000379380.8	protein_coding	131170810,131180095,131182229,131187028,131199531	131171038,131180167,131182299,131187109,131205426	Gene ID= ENSG00000186687.15 TPM= 1.17 Transcript Type= protein_coding
chr5	131264030	131394663	131264030	131394663	+	transcript3116.chr5.nnic@CDC42SE2	transcript3116.chr5.nnic	protein_coding	131264030,131315976,131359209,131385543,131390993,131391829	131264166,131316144,131359547,131385644,131391108,131394663	Gene ID= ENSG00000158985.13 TPM= 40.57 Transcript Type= NA
chr5	131264045	131394663	131264045	131394663	+	transcript3120.chr5.nnic@CDC42SE2	transcript3120.chr5.nnic	protein_coding	131264045,131359209,131385543,131390993,131391829	131264166,131359547,131385644,131391108,131394663	Gene ID= ENSG00000158985.13 TPM= 5.55 Transcript Type= NA
chr5	131264009	131394687	131264009	131394687	+	ENST00000395246.5@CDC42SE2	ENST00000395246.5	protein_coding	131264009,131359209,131385543,131390993,131391918	131264166,131359547,131385644,131391108,131394687	Gene ID= ENSG00000158985.13 TPM= 3.79 Transcript Type= protein_coding
chr5	131264075	131394690	131264075	131394690	+	ENST00000360515.7@CDC42SE2	ENST00000360515.7	protein_coding	131264075,131315976,131359209,131385543,131390993,131391918	131264166,131316144,131359547,131385644,131391108,131394690	Gene ID= ENSG00000158985.13 TPM= 10.8 Transcript Type= protein_coding
chr5	131423921	131635236	131423921	131635236	-	ENST00000509018.5@RAPGEF6	ENST00000509018.5	protein_coding	131634962,131604623,131603271,131592383,131561978,131548047,131521390,131510314,131508071,131505364,131504626,131498443,131495553,131492582,131489546,131479513,131472587,131464041,131461705,131455801,131453054,131446483,131442349,131439581,131433430,131430859,131428902,131423921	131635236,131604693,131603327,131592466,131562047,131548190,131521521,131510491,131508207,131505522,131504778,131498607,131495660,131492785,131489654,131479753,131472744,131464281,131462088,131456012,131453177,131446703,131442537,131439715,131433658,131431349,131429216,131427291	Gene ID= ENSG00000158987.20 TPM= 4.67 Transcript Type= protein_coding
chr5	132073790	132076170	132073790	132076170	+	ENST00000296871.3@CSF2	ENST00000296871.3	protein_coding	132073790,132074081,132074810,132075745	132073982,132074122,132074935,132076170	Gene ID= ENSG00000164400.5 TPM= 1.17 Transcript Type= protein_coding
chr5	132192610	132227799	132192610	132227799	-	transcript3148.chr5.nic@P4HA2	transcript3148.chr5.nic	protein_coding	132227539,132227086,132218545,132217752,132217197,132213916,132210284,132209138,132207708,132204082,132203748,132198879,132198321,132195412,132194926,132192610	132227799,132227221,132218644,132217848,132217348,132214053,132210523,132209331,132207884,132204152,132203847,132198932,132198380,132195480,132195022,132193080	Gene ID= ENSG00000072682.18 TPM= 9.46 Transcript Type= NA
chr5	132192610	132227799	132192610	132227799	-	transcript3151.chr5.nnic@P4HA2	transcript3151.chr5.nnic	protein_coding	132227539,132227086,132218545,132217752,132217197,132213916,132210284,132209138,132207708,132204082,132203748,132198879,132198321,132195412,132194926,132192610	132227799,132227258,132218644,132217848,132217348,132214053,132210523,132209331,132207884,132204152,132203847,132198932,132198380,132195480,132195022,132193080	Gene ID= ENSG00000072682.18 TPM= 7.12 Transcript Type= NA
chr5	132192610	132227801	132192610	132227801	-	transcript3157.chr5.nic@P4HA2	transcript3157.chr5.nic	protein_coding	132227086,132218545,132217752,132217197,132213916,132210284,132209138,132207708,132204082,132203748,132198879,132198206,132195412,132194926,132192610	132227801,132218644,132217848,132217348,132214053,132210523,132209331,132207884,132204152,132203847,132198932,132198271,132195480,132195022,132193080	Gene ID= ENSG00000072682.18 TPM= 7.01 Transcript Type= NA
chr5	132192610	132227848	132192610	132227848	-	transcript3158.chr5.nic@P4HA2	transcript3158.chr5.nic	protein_coding	132227790,132218545,132217752,132217197,132213916,132210284,132209138,132207708,132204082,132203748,132198879,132198206,132195412,132194926,132192610	132227848,132218644,132217848,132217348,132214053,132210523,132209331,132207884,132204152,132203847,132198932,132198271,132195480,132195022,132193080	Gene ID= ENSG00000072682.18 TPM= 9.34 Transcript Type= NA
chr5	132192610	132228082	132192610	132228082	-	ENST00000360568.7@P4HA2	ENST00000360568.7	protein_coding	132227790,132218545,132217752,132217197,132213916,132210284,132209138,132207708,132204082,132203748,132198879,132198321,132195412,132194926,132192610	132228082,132218644,132217848,132217348,132214053,132210523,132209331,132207884,132204152,132203847,132198932,132198380,132195480,132195022,132193080	Gene ID= ENSG00000072682.18 TPM= 33.98 Transcript Type= protein_coding
chr5	132192610	132227857	132192610	132227857	-	ENST00000166534.8@P4HA2	ENST00000166534.8	protein_coding	132227790,132227086,132218545,132217752,132217197,132213916,132210284,132209138,132207708,132204082,132203748,132198879,132198206,132195412,132194926,132192610	132227857,132227221,132218644,132217848,132217348,132214053,132210523,132209331,132207884,132204152,132203847,132198932,132198271,132195480,132195022,132193080	Gene ID= ENSG00000072682.18 TPM= 12.84 Transcript Type= protein_coding
chr5	132192610	132227819	132192610	132227819	-	ENST00000379086.5@P4HA2	ENST00000379086.5	protein_coding	132227790,132227086,132218545,132217752,132217197,132213916,132210284,132209138,132207708,132204082,132203748,132198879,132198321,132195412,132194926,132192610	132227819,132227258,132218644,132217848,132217348,132214053,132210523,132209331,132207884,132204152,132203847,132198932,132198380,132195480,132195022,132193080	Gene ID= ENSG00000072682.18 TPM= 23.47 Transcript Type= protein_coding
chr5	132192613	132227242	132192613	132227242	-	ENST00000379100.6@P4HA2	ENST00000379100.6	protein_coding	132226697,132218545,132217752,132217197,132213916,132210284,132209138,132207708,132204082,132203748,132198879,132198321,132195412,132194926,132192613	132227242,132218644,132217848,132217348,132214053,132210523,132209331,132207884,132204152,132203847,132198932,132198380,132195480,132195022,132193080	Gene ID= ENSG00000072682.18 TPM= 4.79 Transcript Type= protein_coding
chr5	132257671	132273454	132257671	132273454	+	ENST00000253754.7@PDLIM4	ENST00000253754.7	protein_coding	132257671,132262609,132266464,132270915,132271303,132271791,132272025	132257827,132262760,132266545,132271093,132271466,132271908,132273454	Gene ID= ENSG00000131435.12 TPM= 2.34 Transcript Type= protein_coding
chr5	132257707	132272332	132257707	132272332	+	ENST00000379018.7@PDLIM4	ENST00000379018.7	protein_coding	132257707,132262609,132266464,132270915,132271303,132272025	132257827,132262760,132266545,132271093,132271466,132272332	Gene ID= ENSG00000131435.12 TPM= 1.17 Transcript Type= protein_coding
chr5	132294443	132344206	132294443	132344206	+	ENST00000200652.3@SLC22A4	ENST00000200652.3	protein_coding	132294443,132312161,132313614,132322184,132327277,132331756,132334718,132335818,132340565,132343760	132295009,132312264,132313768,132322355,132327403,132331850,132334932,132336000,132340700,132344206	Gene ID= ENSG00000197208.5 TPM= 2.34 Transcript Type= protein_coding
chr5	132369752	132395614	132369752	132395614	+	ENST00000245407.7@SLC22A5	ENST00000245407.7	protein_coding	132369752,132378378,132384147,132385328,132387025,132388921,132390690,132392433,132393676,132394185	132370365,132378481,132384301,132385499,132387151,132389021,132390904,132392615,132393811,132395614	Gene ID= ENSG00000197375.12 TPM= 17.51 Transcript Type= protein_coding
chr5	132410636	132476044	132410636	132476044	+	ENST00000378953.8@C5orf56	ENST00000378953.8	protein_coding	132410636,132419823,132449650,132475667	132411041,132419940,132449689,132476044	Gene ID= ENSG00000197536.11 TPM= 15.18 Transcript Type= protein_coding
chr5	132410920	132488702	132410920	132488702	+	ENST00000612967.2@C5orf56	ENST00000612967.2	protein_coding	132410920,132419823,132449650,132486192	132411041,132419940,132449689,132488702	Gene ID= ENSG00000197536.11 TPM= 8.17 Transcript Type= protein_coding
chr5	132424390	132427459	132424390	132427459	-	transcript3215.chr5.nnic@NA	transcript3215.chr5.nnic	NA	132424390	132427459	Gene ID= novel_gene_chr5_3216 TPM= 5.84 Transcript Type= NA
chr5	132450375	132454261	132450375	132454261	-	transcript3213.chr5.nnic@NA	transcript3213.chr5.nnic	NA	132450375	132454261	Gene ID= novel_gene_chr5_3214 TPM= 25.69 Transcript Type= NA
chr5	132454314	132458141	132454314	132458141	+	transcript3209.chr5.nnic@NA	transcript3209.chr5.nnic	NA	132454314	132458141	Gene ID= novel_gene_chr5_3210 TPM= 3.5 Transcript Type= NA
chr5	132473466	132476039	132473466	132476039	+	transcript3211.chr5.nnic@NA	transcript3211.chr5.nnic	NA	132473466	132476039	Gene ID= novel_gene_chr5_3212 TPM= 3.5 Transcript Type= NA
chr5	132481609	132490798	132481609	132490798	-	ENST00000245414.8@IRF1	ENST00000245414.8	protein_coding	132490545,132489392,132487926,132486954,132486795,132486557,132486251,132485667,132484362,132481609	132490798,132489483,132488025,132487130,132486844,132486686,132486373,132485716,132484497,132484075	Gene ID= ENSG00000125347.13 TPM= 1.17 Transcript Type= protein_coding
chr5	132556930	132595768	132556930	132595768	+	transcript3222.chr5.nic@RAD50	transcript3222.chr5.nic	protein_coding	132556930,132559284,132575777,132579317,132579862,132587562,132587924,132588687,132589631,132591224,132591877,132594869,132595573	132557453,132559367,132575928,132579502,132580066,132587690,132588089,132588880,132589837,132591406,132592034,132595044,132595768	Gene ID= ENSG00000113522.13 TPM= 7.01 Transcript Type= NA
chr5	132643733	132643894	132643733	132643894	+	transcript3225.chr5.nnic@NA	transcript3225.chr5.nnic	NA	132643733	132643894	Gene ID= novel_gene_chr5_3226 TPM= 2.34 Transcript Type= NA
chr5	132710974	132737567	132710974	132737567	-	transcript3231.chr5.nic@KIF3A	transcript3231.chr5.nic	protein_coding	132737414,132734205,132726354,132726128,132720609,132716845,132716245,132715757,132710974	132737567,132734478,132726498,132726212,132720714,132716984,132716442,132715931,132711057	Gene ID= ENSG00000131437.15 TPM= 2.34 Transcript Type= NA
chr5	132747445	132754403	132747445	132754403	+	ENST00000614847.1@CCNI2	ENST00000614847.1	protein_coding	132747445,132748347,132749348,132750857,132751918,132752866	132747924,132748475,132749422,132750997,132752196,132754403	Gene ID= ENSG00000205089.7 TPM= 1.17 Transcript Type= protein_coding
chr5	132756005	132777869	132756005	132777869	-	ENST00000448933.5@SEPT8	ENST00000448933.5	protein_coding	132777676,132765409,132764224,132763706,132762484,132761800,132761458,132761133,132760802,132756005	132777869,132765529,132764419,132763892,132762645,132761896,132761626,132761265,132760992,132758824	Gene ID= ENSG00000164402.13 TPM= 11.68 Transcript Type= protein_coding
chr5	132750817	132777375	132750817	132777375	-	ENST00000378719.6@SEPT8	ENST00000378719.6	protein_coding	132777108,132765409,132764224,132763706,132762484,132761800,132761458,132761133,132760802,132750817	132777375,132765529,132764419,132763892,132762645,132761896,132761626,132761265,132760992,132752181	Gene ID= ENSG00000164402.13 TPM= 18.68 Transcript Type= protein_coding
chr5	132756001	132777421	132756001	132777421	-	ENST00000296873.11@SEPT8	ENST00000296873.11	protein_coding	132777108,132765409,132764224,132763706,132762484,132761800,132761458,132761133,132760802,132756001	132777421,132765529,132764419,132763892,132762645,132761896,132761626,132761265,132760992,132758824	Gene ID= ENSG00000164402.13 TPM= 30.36 Transcript Type= protein_coding
chr5	132813290	132816785	132813290	132816785	+	transcript3245.chr5.nnic@NA	transcript3245.chr5.nnic	NA	132813290	132816785	Gene ID= novel_gene_chr5_3246 TPM= 2.34 Transcript Type= NA
chr5	132822141	132830699	132822141	132830699	-	transcript3249.chr5.nnic@SHROOM1	transcript3249.chr5.nnic	protein_coding	132830594,132827461,132825163,132825018,132824615,132823850,132823623,132823250,132822141	132830699,132827588,132826182,132825073,132824821,132824419,132823764,132823522,132823128	Gene ID= ENSG00000164403.14 TPM= 9.05 Transcript Type= NA
chr5	132822141	132830647	132822141	132830647	-	transcript3253.chr5.nnic@SHROOM1	transcript3253.chr5.nnic	protein_coding	132830594,132825163,132825018,132824615,132824281,132823623,132823250,132822141	132830647,132826182,132825073,132824821,132824419,132823764,132823522,132823128	Gene ID= ENSG00000164403.14 TPM= 3.5 Transcript Type= NA
chr5	132822352	132830826	132822352	132830826	-	transcript3257.chr5.nic@SHROOM1	transcript3257.chr5.nic	protein_coding	132830594,132825163,132825018,132824615,132823850,132823623,132823250,132822352	132830826,132826182,132825073,132824821,132824419,132823764,132823522,132823128	Gene ID= ENSG00000164403.14 TPM= 5.55 Transcript Type= NA
chr5	132866560	132868031	132866560	132868031	+	ENST00000378670.7@UQCRQ	ENST00000378670.7	protein_coding	132866560,132866869,132867488	132866687,132867035,132868031	Gene ID= ENSG00000164405.10 TPM= 107.42 Transcript Type= protein_coding
chr5	132866633	132867687	132866633	132867687	+	ENST00000498309.1@UQCRQ	ENST00000498309.1	protein_coding	132866633,132866869	132866687,132867687	Gene ID= ENSG00000164405.10 TPM= 9.34 Transcript Type= retained_intron
chr5	132866642	132867699	132866642	132867699	+	ENST00000496429.1@UQCRQ	ENST00000496429.1	protein_coding	132866642,132867488	132866687,132867699	Gene ID= ENSG00000164405.10 TPM= 8.17 Transcript Type= processed_transcript
chr5	132866630	132867687	132866630	132867687	+	ENST00000378667.1@UQCRQ	ENST00000378667.1	protein_coding	132866630,132866869,132867488	132866691,132867035,132867687	Gene ID= ENSG00000164405.10 TPM= 113.26 Transcript Type= protein_coding
chr5	132875379	132963634	132875379	132963634	-	ENST00000265343.9@AFF4	ENST00000265343.9	protein_coding	132963259,132937067,132934147,132932178,132927121,132904368,132902442,132899587,132899104,132898230,132896323,132893030,132892164,132889079,132888097,132887846,132887521,132886310,132885076,132883340,132875379	132963634,132937193,132934941,132932222,132927207,132904404,132902487,132899641,132899141,132898392,132897240,132893118,132892404,132889173,132888160,132887982,132887592,132886403,132885119,132883560,132881186	Gene ID= ENSG00000072364.12 TPM= 8.17 Transcript Type= protein_coding
chr5	132926701	132963513	132926701	132963513	-	ENST00000465484.1@AFF4	ENST00000465484.1	protein_coding	132963259,132937067,132934147,132932178,132926701	132963513,132937193,132934941,132932222,132927207	Gene ID= ENSG00000072364.12 TPM= 1.17 Transcript Type= retained_intron
chr5	132909877	132912190	132909877	132912190	+	transcript3287.chr5.nnic@NA	transcript3287.chr5.nnic	NA	132909877	132912190	Gene ID= novel_gene_chr5_3288 TPM= 2.34 Transcript Type= NA
chr5	132996985	133026604	132996985	133026604	-	ENST00000324170.7@ZCCHC10	ENST00000324170.7	protein_coding	133026497,133006759,133000132,132996985	133026604,133006920,133000173,132998850	Gene ID= ENSG00000155329.11 TPM= 9.34 Transcript Type= protein_coding
chr5	133019038	133026589	133019038	133026589	-	ENST00000504170.2@ZCCHC10	ENST00000504170.2	protein_coding	133026497,133022841,133019038	133026589,133022906,133019203	Gene ID= ENSG00000155329.11 TPM= 2.34 Transcript Type= protein_coding
chr5	132996996	133026549	132996996	133026549	-	ENST00000355372.6@ZCCHC10	ENST00000355372.6	protein_coding	133026497,133022841,133006759,133000132,132996996	133026549,133022906,133006920,133000173,132998832	Gene ID= ENSG00000155329.11 TPM= 4.67 Transcript Type= protein_coding
chr5	133051065	133051899	133051065	133051899	-	transcript3300.chr5.nnic@NA	transcript3300.chr5.nnic	NA	133051065	133051899	Gene ID= novel_gene_chr5_3301 TPM= 2.34 Transcript Type= NA
chr5	133955502	133968787	133955502	133968787	-	ENST00000231512.4@C5orf15	ENST00000231512.4	protein_coding	133968446,133959494,133955502	133968787,133960020,133956990	Gene ID= ENSG00000113583.7 TPM= 115.59 Transcript Type= protein_coding
chr5	133971915	134005133	133971915	134005133	-	ENST00000265333.7@VDAC1	ENST00000265333.7	protein_coding	134004895,133992946,133992306,133991002,133990855,133980729,133975871,133973791,133971915	134005133,133993018,133992355,133991154,133990907,133980956,133976021,133973848,133972862	Gene ID= ENSG00000213585.10 TPM= 11.09 Transcript Type= protein_coding
chr5	134004242	134005562	134004242	134005562	+	transcript3330.chr5.nnic@NA	transcript3330.chr5.nnic	NA	134004242	134005562	Gene ID= novel_gene_chr5_3331 TPM= 3.5 Transcript Type= NA
chr5	134114711	134147997	134114711	134147997	+	ENST00000342854.9@TCF7	ENST00000342854.9	protein_coding	134114711,134115321,134115909,134138059,134138951,134142185,134142721,134142993,134143592,134146224	134115155,134115387,134116033,134138164,134139038,134142304,134142883,134143100,134143640,134147997	Gene ID= ENSG00000081059.19 TPM= 5.84 Transcript Type= protein_coding
chr5	134194334	134226142	134194334	134226142	-	ENST00000481195.5@PPP2CA	ENST00000481195.5	protein_coding	134225760,134205922,134201848,134200985,134200335,134199086,134194334	134226142,134206131,134202021,134201074,134200496,134199204,134197844	Gene ID= ENSG00000113575.9 TPM= 8.17 Transcript Type= protein_coding
chr5	134371474	134390779	134371474	134390779	+	transcript3362.chr5.nic@UBE2B	transcript3362.chr5.nic	protein_coding	134371474,134374383,134376669,134380719,134388325,134388977	134371639,134374463,134376694,134380808,134388413,134390779	Gene ID= ENSG00000119048.7 TPM= 3.5 Transcript Type= NA
chr5	134371558	134372177	134371558	134372177	-	transcript3374.chr5.nnic@NA	transcript3374.chr5.nnic	NA	134371558	134372177	Gene ID= novel_gene_chr5_3375 TPM= 3.5 Transcript Type= NA
chr5	134402087	134411898	134402087	134411898	-	ENST00000458198.2@CDKN2AIPNL	ENST00000458198.2	protein_coding	134411616,134409903,134402087	134411898,134410002,134402926	Gene ID= ENSG00000237190.3 TPM= 23.35 Transcript Type= protein_coding
chr5	134410548	134411899	134410548	134411899	-	transcript3380.chr5.nnic@NA	transcript3380.chr5.nnic	NA	134410548	134411899	Gene ID= novel_gene_chr5_3381 TPM= 2.34 Transcript Type= NA
chr5	134506552	134509229	134506552	134509229	+	ENST00000515627.2@LINC01843	ENST00000515627.2	lincRNA	134506552,134508406	134506834,134509229	Gene ID= ENSG00000251169.2 TPM= 1.17 Transcript Type= lincRNA
chr5	134525649	134579475	134525649	134579475	+	transcript3385.chr5.nic@JADE2	transcript3385.chr5.nic	protein_coding	134525649,134535858,134537989,134552052,134559830,134560746,134562200,134564494,134566116,134573645,134576768,134578497	134526011,134535915,134538083,134552209,134559990,134560957,134562367,134564610,134566580,134573762,134576896,134579475	Gene ID= ENSG00000043143.20 TPM= 14.01 Transcript Type= NA
chr5	134601144	134632988	134601144	134632988	-	ENST00000402673.6@SAR1B	ENST00000402673.6	protein_coding	134632728,134623962,134620933,134612691,134609571,134608372,134601144	134632988,134624037,134621052,134612756,134609674,134608503,134607066	Gene ID= ENSG00000152700.13 TPM= 78.23 Transcript Type= protein_coding
chr5	134631602	134632809	134631602	134632809	-	ENST00000504242.1@SAR1B	ENST00000504242.1	protein_coding	134632728,134631602	134632809,134632195	Gene ID= ENSG00000152700.13 TPM= 1.17 Transcript Type= processed_transcript
chr5	134647870	134648727	134647870	134648727	-	transcript3405.chr5.nnic@NA	transcript3405.chr5.nnic	NA	134647870	134648727	Gene ID= novel_gene_chr5_3406 TPM= 2.34 Transcript Type= NA
chr5	134648789	134727823	134648789	134727823	+	ENST00000398844.6@SEC24A	ENST00000398844.6	protein_coding	134648789,134661119,134666823,134671809,134674615,134675045,134676023,134679602,134682373,134686790,134688181,134692602,134693727,134697126,134697899,134703759,134705327,134708713,134715024,134718069,134720998,134723567,134724980	134649173,134661586,134666996,134671886,134674775,134675217,134676125,134679728,134682482,134686902,134688299,134692657,134693933,134697246,134698057,134703932,134705437,134708888,134715161,134718173,134721090,134723670,134727823	Gene ID= ENSG00000113615.12 TPM= 3.5 Transcript Type= protein_coding
chr5	134738501	134752160	134738501	134752160	+	ENST00000297156.3@CAMLG	ENST00000297156.3	protein_coding	134738501,134741063,134743987,134750759	134738792,134741523,134744052,134752160	Gene ID= ENSG00000164615.4 TPM= 43.2 Transcript Type= protein_coding
chr5	134738501	134751377	134738501	134751377	+	transcript3409.chr5.nnic@CAMLG	transcript3409.chr5.nnic	protein_coding	134738501,134741063,134750759	134738792,134741523,134751377	Gene ID= ENSG00000164615.4 TPM= 3.5 Transcript Type= NA
chr5	134738519	134751377	134738519	134751377	+	transcript3414.chr5.nnic@CAMLG	transcript3414.chr5.nnic	protein_coding	134738519,134750759	134738792,134751377	Gene ID= ENSG00000164615.4 TPM= 7.01 Transcript Type= NA
chr5	134738583	134751377	134738583	134751377	+	ENST00000514518.1@CAMLG	ENST00000514518.1	protein_coding	134738583,134743987,134750759	134738792,134744052,134751377	Gene ID= ENSG00000164615.4 TPM= 8.17 Transcript Type= protein_coding
chr5	134758748	134859727	134758748	134859727	+	transcript3421.chr5.nnic@DDX46	transcript3421.chr5.nnic	protein_coding	134758748,134763904,134766917,134770903,134773696,134777574,134781133,134781921,134782945,134784366,134785465,134788513,134790470,134794850,134795988,134807748,134811221,134811696,134816430,134817496,134818860,134826947,134828659,134854898	134758955,134764092,134767060,134770999,134773861,134777725,134781246,134782086,134783065,134784541,134785586,134788591,134790552,134795014,134796150,134807941,134811358,134811845,134816610,134817714,134819004,134827020,134828746,134859727	Gene ID= ENSG00000145833.15 TPM= 2.34 Transcript Type= NA
chr5	134758781	134831138	134758781	134831138	+	ENST00000452510.6@DDX46	ENST00000452510.6	protein_coding	134758781,134763904,134766917,134770903,134773696,134777574,134781133,134781921,134782945,134784366,134785465,134788513,134790470,134794850,134795988,134807748,134811221,134811696,134816430,134817496,134818860,134826947,134828659	134758955,134764092,134767060,134770999,134773861,134777725,134781246,134782086,134783065,134784541,134785586,134788591,134790552,134795014,134796150,134807941,134811358,134811845,134816606,134817714,134819004,134827020,134831138	Gene ID= ENSG00000145833.15 TPM= 7.01 Transcript Type= protein_coding
chr5	134758804	134829296	134758804	134829296	+	ENST00000354283.8@DDX46	ENST00000354283.8	protein_coding	134758804,134763904,134766917,134770903,134773696,134777574,134781133,134781921,134782945,134784366,134785465,134788513,134790470,134794850,134795988,134807748,134811221,134811696,134816430,134817496,134818860,134826947,134828659	134758955,134764092,134767060,134770999,134773861,134777725,134781246,134782086,134783065,134784541,134785586,134788591,134790552,134795014,134796150,134807941,134811358,134811845,134816603,134817714,134819004,134827020,134829296	Gene ID= ENSG00000145833.15 TPM= 3.5 Transcript Type= protein_coding
chr5	134845988	134859737	134845988	134859737	+	ENST00000394976.3@C5orf24	ENST00000394976.3	protein_coding	134845988,134854898	134846212,134859737	Gene ID= ENSG00000181904.8 TPM= 79.4 Transcript Type= protein_coding
chr5	134846096	134859732	134846096	134859732	+	ENST00000504727.1@C5orf24	ENST00000504727.1	protein_coding	134846096,134854898,134857357	134846212,134855327,134859732	Gene ID= ENSG00000181904.8 TPM= 5.84 Transcript Type= protein_coding
chr5	134873803	134901525	134873803	134901525	+	ENST00000358387.8@TXNDC15	ENST00000358387.8	protein_coding	134873803,134887695,134893492,134896294,134899489	134874530,134888182,134893655,134896424,134901525	Gene ID= ENSG00000113621.14 TPM= 1.17 Transcript Type= protein_coding
chr5	134874397	134901511	134874397	134901511	+	ENST00000507024.5@TXNDC15	ENST00000507024.5	protein_coding	134874397,134887695,134893492,134896294,134899489	134874483,134888182,134893655,134896424,134901511	Gene ID= ENSG00000113621.14 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr5	134904209	134905691	134904209	134905691	+	transcript3457.chr5.nnic@NA	transcript3457.chr5.nnic	NA	134904209	134905691	Gene ID= novel_gene_chr5_3458 TPM= 2.34 Transcript Type= NA
chr5	134904906	134961277	134904906	134961277	+	ENST00000254908.10@PCBD2	ENST00000254908.10	protein_coding	134904906,134910335,134959040,134960586	134905223,134910466,134959120,134961277	Gene ID= ENSG00000132570.14 TPM= 3.5 Transcript Type= protein_coding
chr5	135334381	135399566	135334381	135399566	-	transcript3469.chr5.nic@H2AFY	transcript3469.chr5.nic	protein_coding	135399062,135388922,135370036,135369406,135360497,135350823,135345968,135343260,135334381	135399566,135389126,135370142,135369603,135360604,135350913,135346057,135343434,135335141	Gene ID= ENSG00000113648.16 TPM= 113.26 Transcript Type= NA
chr5	135333900	135399622	135333900	135399622	-	ENST00000511689.5@H2AFY	ENST00000511689.5	protein_coding	135399062,135388922,135370036,135369406,135360497,135352946,135345968,135343260,135333900	135399622,135389126,135370142,135369603,135360607,135353045,135346057,135343434,135335141	Gene ID= ENSG00000113648.16 TPM= 4.67 Transcript Type= protein_coding
chr5	135334410	135399211	135334410	135399211	-	ENST00000312469.8@H2AFY	ENST00000312469.8	protein_coding	135399062,135388922,135370036,135369406,135360497,135350823,135345968,135343260,135334410	135399211,135389126,135370142,135369603,135360607,135350913,135346057,135343434,135335141	Gene ID= ENSG00000113648.16 TPM= 186.82 Transcript Type= protein_coding
chr5	135385207	135388063	135385207	135388063	+	transcript3488.chr5.nnic@NA	transcript3488.chr5.nnic	NA	135385207	135388063	Gene ID= novel_gene_chr5_3489 TPM= 7.01 Transcript Type= NA
chr5	135570679	135579064	135570679	135579064	-	ENST00000512158.5@CXCL14	ENST00000512158.5	protein_coding	135578715,135578434,135574572,135570679	135579064,135578539,135574685,135571868	Gene ID= ENSG00000145824.12 TPM= 2.34 Transcript Type= protein_coding
chr5	136028895	136063817	136028895	136063817	+	ENST00000442011.6@TGFBI	ENST00000442011.6	protein_coding	136028895,136033763,136044058,136046335,136046851,136047274,136049439,136052907,136053943,136054716,136055680,136056665,136059090,136060834,136061500,136062663,136063186	136029189,136033861,136044122,136046495,136047015,136047420,136049580,136053119,136054080,136054861,136055816,136056795,136059214,136060936,136061579,136062687,136063817	Gene ID= ENSG00000120708.16 TPM= 94.58 Transcript Type= protein_coding
chr5	136028980	136063817	136028980	136063817	+	transcript3494.chr5.nic@TGFBI	transcript3494.chr5.nic	protein_coding	136028980,136033763,136044058,136046335,136047274,136049439,136052907,136053943,136054716,136055680,136056665,136059090,136060834,136061500,136062663,136063186	136029189,136033861,136044122,136047015,136047420,136049580,136053119,136054080,136054861,136055816,136056795,136059214,136060936,136061579,136062687,136063817	Gene ID= ENSG00000120708.16 TPM= 21.02 Transcript Type= NA
chr5	136132845	136182732	136132845	136182732	+	ENST00000545279.5@SMAD5	ENST00000545279.5	protein_coding	136132845,136147832,136153592,136160856,136163272,136172434,136174376,136177337	136132962,136147906,136154163,136161107,136163391,136172655,136174632,136182732	Gene ID= ENSG00000113658.16 TPM= 11.68 Transcript Type= protein_coding
chr5	136132847	136182734	136132847	136182734	+	ENST00000545620.5@SMAD5	ENST00000545620.5	protein_coding	136132847,136153592,136160856,136163272,136172434,136174376,136177337	136132962,136154163,136161107,136163391,136172655,136174632,136182734	Gene ID= ENSG00000113658.16 TPM= 9.34 Transcript Type= protein_coding
chr5	136132927	136176483	136132927	136176483	+	transcript3507.chr5.nic@SMAD5	transcript3507.chr5.nic	protein_coding	136132927,136153592,136160856,136163272,136172434,136174376	136132962,136154163,136161107,136163391,136172655,136176483	Gene ID= ENSG00000113658.16 TPM= 2.34 Transcript Type= NA
chr5	137752616	137754366	137752616	137754366	-	transcript3511.chr5.nnic@NA	transcript3511.chr5.nnic	NA	137752616	137754366	Gene ID= novel_gene_chr5_3512 TPM= 24.52 Transcript Type= NA
chr5	137801193	137810751	137801193	137810751	+	ENST00000510937.1@NPY6R	ENST00000510937.1	transcribed_processed_pseudogene	137801193,137808024	137801452,137810751	Gene ID= ENSG00000226306.6 TPM= 1.17 Transcript Type= processed_transcript
chr5	137937960	138033031	137937960	138033031	-	ENST00000033079.7@FAM13B	ENST00000033079.7	protein_coding	138032782,138021031,138018955,138018302,138011768,138011008,138006990,137988274,137987461,137985257,137962405,137960166,137959616,137954166,137953336,137952628,137948955,137946228,137945902,137943133,137942875,137941944,137937960	138033031,138021197,138019146,138018514,138011945,138011149,138007147,137988315,137987616,137985389,137962469,137960214,137959763,137954376,137953465,137952709,137949184,137946311,137945997,137943216,137943038,137942045,137940348	Gene ID= ENSG00000031003.10 TPM= 4.67 Transcript Type= protein_coding
chr5	138156882	138178629	138156882	138178629	-	transcript3525.chr5.nic@BRD8	transcript3525.chr5.nic	protein_coding	138178596,138177571,138172065,138171361,138171038,138170832,138170345,138169222,138168470,138167934,138166518,138165828,138164714,138164320,138164087,138163130,138162054,138161796,138160891,138160069,138159555,138156882	138178629,138177667,138172134,138171410,138171160,138170912,138170409,138169358,138168688,138168078,138166610,138166108,138165166,138164413,138164133,138163344,138162146,138161864,138161068,138160173,138159599,138157267	Gene ID= ENSG00000112983.17 TPM= 3.99 Transcript Type= NA
chr5	138156882	138178661	138156882	138178661	-	transcript3528.chr5.nic@BRD8	transcript3528.chr5.nic	protein_coding	138178596,138177571,138172065,138171361,138171038,138170832,138170345,138169222,138168470,138167934,138165828,138164714,138164320,138164087,138163130,138162054,138161796,138160891,138160069,138159555,138156882	138178661,138177667,138172134,138171410,138171160,138170912,138170409,138169358,138168688,138168078,138166108,138165166,138164413,138164133,138163344,138162146,138161864,138161068,138160173,138159599,138157267	Gene ID= ENSG00000112983.17 TPM= 7.5 Transcript Type= NA
chr5	138156882	138178631	138156882	138178631	-	transcript3531.chr5.nic@BRD8	transcript3531.chr5.nic	protein_coding	138178596,138177571,138172065,138171361,138171038,138170832,138170345,138169222,138168470,138167934,138166518,138165828,138164714,138164320,138164087,138163130,138162054,138161796,138160891,138160069,138156882	138178631,138177667,138172134,138171410,138171160,138170912,138170409,138169358,138168688,138168078,138166727,138166108,138165166,138164413,138164133,138163344,138162146,138161864,138161068,138160173,138157267	Gene ID= ENSG00000112983.17 TPM= 12.33 Transcript Type= NA
chr5	138156882	138178644	138156882	138178644	-	transcript3532.chr5.nic@BRD8	transcript3532.chr5.nic	protein_coding	138178596,138177571,138172065,138171361,138171038,138170832,138170345,138169222,138167934,138165828,138164714,138164320,138164087,138163130,138162054,138161796,138160891,138160069,138159555,138156882	138178644,138177667,138172134,138171410,138171160,138170912,138170409,138169358,138168078,138166108,138165166,138164413,138164133,138163344,138162146,138161864,138161068,138160173,138159599,138157267	Gene ID= ENSG00000112983.17 TPM= 5.16 Transcript Type= NA
chr5	138156882	138178629	138156882	138178629	-	transcript3534.chr5.nic@BRD8	transcript3534.chr5.nic	protein_coding	138178596,138177571,138172065,138171361,138171038,138170832,138170345,138169222,138167934,138166518,138165828,138164714,138164320,138164087,138163130,138162054,138161796,138160891,138160069,138156882	138178629,138177667,138172134,138171410,138171160,138170912,138170409,138169358,138168078,138166727,138166108,138165166,138164413,138164133,138163344,138162146,138161864,138161068,138160173,138157267	Gene ID= ENSG00000112983.17 TPM= 2.99 Transcript Type= NA
chr5	138156882	138178630	138156882	138178630	-	ENST00000230901.9@BRD8	ENST00000230901.9	protein_coding	138178596,138177571,138172065,138171361,138171038,138170832,138170345,138169222,138168470,138167934,138166518,138165828,138164714,138164320,138164087,138163130,138162054,138161796,138160891,138160069,138159555,138156882	138178630,138177667,138172134,138171410,138171160,138170912,138170409,138169358,138168688,138168078,138166727,138166108,138165166,138164413,138164133,138163344,138162146,138161864,138161068,138160173,138159599,138157267	Gene ID= ENSG00000112983.17 TPM= 16.84 Transcript Type= protein_coding
chr5	138156897	138178669	138156897	138178669	-	ENST00000411594.6@BRD8	ENST00000411594.6	protein_coding	138178596,138177571,138172065,138171361,138171038,138170832,138170345,138169222,138168470,138167934,138165828,138164714,138164320,138164087,138163130,138162054,138161796,138160891,138160069,138156897	138178669,138177667,138172134,138171410,138171160,138170912,138170409,138169358,138168688,138168078,138166108,138165166,138164413,138164133,138163344,138162146,138161864,138161068,138160173,138157267	Gene ID= ENSG00000112983.17 TPM= 6.09 Transcript Type= protein_coding
chr5	138156882	138178633	138156882	138178633	-	ENST00000402931.5@BRD8	ENST00000402931.5	protein_coding	138178596,138177571,138172065,138171361,138171038,138170832,138170345,138169222,138167934,138166518,138165828,138164714,138164320,138164087,138163130,138162054,138161796,138160891,138160069,138159555,138156882	138178633,138177667,138172134,138171410,138171160,138170912,138170409,138169358,138168078,138166727,138166108,138165166,138164413,138164133,138163344,138162146,138161864,138161068,138160173,138159599,138157267	Gene ID= ENSG00000112983.17 TPM= 11 Transcript Type= protein_coding
chr5	138156882	138178599	138156882	138178599	-	ENST00000454473.5@BRD8	ENST00000454473.5	protein_coding	138178596,138177571,138172065,138171361,138171038,138170832,138170345,138169222,138168470,138167934,138166518,138165828,138164714,138164320,138164087,138163130,138162054,138161796,138160891,138160069,138156882	138178599,138177667,138172134,138171410,138171160,138170912,138170409,138169358,138168688,138168078,138166610,138166108,138165166,138164413,138164133,138163344,138162146,138161864,138161068,138160173,138157267	Gene ID= ENSG00000112983.17 TPM= 1.82 Transcript Type= protein_coding
chr5	138178998	138187715	138178998	138187715	+	ENST00000394894.7@KIF20A	ENST00000394894.7	protein_coding	138178998,138179660,138181422,138181609,138182323,138182586,138182861,138183169,138183470,138183688,138183962,138184239,138184512,138184807,138185095,138185512,138185961,138186294,138187096	138179202,138179845,138181511,138181728,138182461,138182773,138182990,138183363,138183581,138183756,138184105,138184404,138184676,138184946,138185197,138185710,138186052,138186431,138187715	Gene ID= ENSG00000112984.11 TPM= 2.34 Transcript Type= protein_coding
chr5	138187648	138213343	138187648	138213343	-	ENST00000394886.6@CDC23	ENST00000394886.6	protein_coding	138213152,138212991,138206547,138202113,138201343,138201107,138198605,138198426,138198199,138192504,138192269,138191862,138191474,138189828,138189633,138187648	138213343,138213063,138206684,138202155,138201448,138201239,138198782,138198523,138198280,138192657,138192388,138191937,138191535,138189906,138189752,138189148	Gene ID= ENSG00000094880.10 TPM= 39.7 Transcript Type= protein_coding
chr5	138205871	138213343	138205871	138213343	-	ENST00000394884.7@CDC23	ENST00000394884.7	protein_coding	138213152,138212991,138205871	138213343,138213063,138206684	Gene ID= ENSG00000094880.10 TPM= 1.17 Transcript Type= protein_coding
chr5	138252379	138274671	138252379	138274671	-	ENST00000274721.7@GFRA3	ENST00000274721.7	protein_coding	138274334,138264261,138259557,138257639,138254057,138253766,138253287,138252379	138274671,138264548,138259649,138257951,138254160,138253900,138253375,138253057	Gene ID= ENSG00000146013.10 TPM= 3.5 Transcript Type= protein_coding
chr5	138338032	138349729	138338032	138349729	+	ENST00000239906.9@FAM53C	ENST00000239906.9	protein_coding	138338032,138341184,138341809,138344825,138346702	138338307,138341413,138341866,138345609,138349729	Gene ID= ENSG00000120709.10 TPM= 60.71 Transcript Type= protein_coding
chr5	138352596	138437027	138352596	138437027	+	ENST00000314358.9@KDM3B	ENST00000314358.9	protein_coding	138352596,138372674,138375093,138377720,138379584,138381516,138386022,138391013,138393171,138398178,138399860,138415132,138417483,138418953,138420706,138424075,138425411,138426975,138427189,138427967,138429826,138430249,138431425,138435620	138352987,138372841,138375206,138377825,138379708,138381590,138386621,138392261,138393372,138398392,138400012,138415239,138417610,138419232,138420962,138424341,138425582,138427065,138427319,138428086,138429965,138430425,138431559,138437027	Gene ID= ENSG00000120733.13 TPM= 49.04 Transcript Type= protein_coding
chr5	138439017	138446964	138439017	138446964	+	ENST00000378339.6@REEP2	ENST00000378339.6	protein_coding	138439017,138441016,138441385,138444415,138444754,138445228,138445468,138445683	138439240,138441088,138441461,138444535,138444867,138445375,138445598,138446964	Gene ID= ENSG00000132563.15 TPM= 1.17 Transcript Type= protein_coding
chr5	138465490	138469315	138465490	138469315	+	ENST00000239938.4@EGR1	ENST00000239938.4	protein_coding	138465490,138466757	138466068,138469315	Gene ID= ENSG00000120738.7 TPM= 99.25 Transcript Type= protein_coding
chr5	138506099	138543300	138506099	138543300	-	ENST00000360541.9@ETF1	ENST00000360541.9	protein_coding	138543097,138542833,138518692,138517561,138513568,138512764,138511475,138511045,138510565,138508669,138506099	138543300,138542936,138518867,138517700,138513706,138512954,138511604,138511200,138510629,138508816,138508387	Gene ID= ENSG00000120705.12 TPM= 9.34 Transcript Type= protein_coding
chr5	138554882	138575444	138554882	138575444	-	ENST00000297185.7@HSPA9	ENST00000297185.7	protein_coding	138575238,138574068,138573763,138570960,138568925,138567649,138567455,138567001,138566626,138561580,138559864,138558553,138557869,138557402,138556774,138556452,138554882	138575444,138574126,138573850,138571141,138569049,138567722,138567561,138567163,138566718,138561789,138560091,138558657,138557986,138557496,138556866,138556592,138556114	Gene ID= ENSG00000113013.12 TPM= 19.85 Transcript Type= protein_coding
chr5	138753423	138935034	138753423	138935034	+	ENST00000302763.11@CTNNA1	ENST00000302763.11	protein_coding	138753423,138781923,138783177,138810038,138812183,138824530,138827515,138886212,138887490,138904349,138917742,138924510,138925256,138929246,138930473,138930830,138932578,138933802	138753510,138782029,138783372,138810204,138812302,138824799,138827718,138886292,138887642,138904441,138917898,138924710,138925407,138929356,138930654,138930935,138932712,138935034	Gene ID= ENSG00000044115.20 TPM= 209.78 Transcript Type= protein_coding
chr5	138753418	138935033	138753418	138935033	+	ENST00000627109.2@CTNNA1	ENST00000627109.2	protein_coding	138753418,138781923,138783177,138810038,138812183,138824530,138827515,138886212,138887490,138904349,138917742,138924510,138925256,138929246,138930473,138930830,138932578,138932888,138933802	138753510,138782029,138783372,138810204,138812302,138824799,138827718,138886292,138887642,138904441,138917898,138924710,138925407,138929356,138930654,138930935,138932712,138932958,138935033	Gene ID= ENSG00000044115.20 TPM= 11.48 Transcript Type= protein_coding
chr5	138825484	138828053	138825484	138828053	-	transcript3622.chr5.nnic@NA	transcript3622.chr5.nnic	NA	138825484	138828053	Gene ID= novel_gene_chr5_3623 TPM= 5.84 Transcript Type= NA
chr5	138894283	138897303	138894283	138897303	-	transcript3624.chr5.nnic@NA	transcript3624.chr5.nnic	NA	138894283	138897303	Gene ID= novel_gene_chr5_3625 TPM= 4.67 Transcript Type= NA
chr5	138931252	138935033	138931252	138935033	+	transcript3620.chr5.nnic@NA	transcript3620.chr5.nnic	NA	138931252	138935033	Gene ID= novel_gene_chr5_3621 TPM= 5.45 Transcript Type= NA
chr5	138946995	139198424	138946995	139198424	-	transcript3633.chr5.nic@SIL1	transcript3633.chr5.nic	protein_coding	139198269,139127739,139121035,139050938,139042620,139021171,138951788,138951171,138946995	139198424,139127853,139121173,139051046,139042719,139021292,138951884,138951335,138947473	Gene ID= ENSG00000120725.12 TPM= 3.5 Transcript Type= NA
chr5	138946720	139198398	138946720	139198398	-	ENST00000394817.6@SIL1	ENST00000394817.6	protein_coding	139198269,139127739,139121035,139050938,139042620,139026801,139021171,138951788,138951171,138946720	139198398,139127853,139121173,139051046,139042719,139026992,139021292,138951884,138951335,138947473	Gene ID= ENSG00000120725.12 TPM= 5.84 Transcript Type= protein_coding
chr5	139008352	139011485	139008352	139011485	-	transcript3638.chr5.nnic@NA	transcript3638.chr5.nnic	NA	139008352	139011485	Gene ID= novel_gene_chr5_3639 TPM= 2.34 Transcript Type= NA
chr5	139274104	139331671	139274104	139331671	+	ENST00000394800.6@MATR3	ENST00000394800.6	protein_coding	139274104,139276121,139278327,139279051,139293453,139307239,139314675,139315697,139316076,139317053,139317596,139318908,139319334,139321898,139322463,139322598,139325296,139326163,139329345	139274161,139276150,139278408,139279129,139293575,139308327,139314736,139315738,139316188,139317105,139317721,139319033,139319501,139322029,139322506,139322967,139325662,139326284,139331671	Gene ID= ENSG00000280987.4 TPM= 1.17 Transcript Type= protein_coding
chr5	139274103	139330394	139274103	139330394	+	ENST00000361059.7@MATR3	ENST00000361059.7	protein_coding	139274103,139276121,139278327,139279051,139307239,139314675,139315697,139316076,139317053,139317596,139318908,139319334,139321898,139322463,139322598,139325440,139326163,139329345	139274161,139276150,139278408,139279129,139308327,139314736,139315738,139316188,139317105,139317721,139319033,139319501,139322029,139322506,139322967,139325662,139326284,139330394	Gene ID= ENSG00000280987.4 TPM= 3.74 Transcript Type= protein_coding
chr5	139293598	139330441	139293598	139330441	+	transcript3645.chr5.nic@MATR3	transcript3645.chr5.nic	protein_coding	139293598,139307239,139314675,139315697,139316076,139317053,139317596,139318908,139319334,139321898,139322463,139322598,139325296,139326163,139329345	139293805,139308327,139314736,139315738,139316188,139317105,139317721,139319033,139319501,139322029,139322506,139322967,139325662,139326284,139330441	Gene ID= ENSG00000015479.18 TPM= 57.75 Transcript Type= NA
chr5	139293648	139331359	139293648	139331359	+	ENST00000394805.7@MATR3	ENST00000394805.7	protein_coding	139293648,139307239,139314675,139315697,139316076,139317053,139317596,139318908,139319334,139321898,139322463,139322598,139325440,139326163,139329345	139293805,139308327,139314736,139315738,139316188,139317105,139317721,139319033,139319501,139322029,139322506,139322967,139325662,139326284,139331359	Gene ID= ENSG00000015479.18 TPM= 16.78 Transcript Type= protein_coding
chr5	139293778	139330441	139293778	139330441	+	ENST00000618441.5@MATR3	ENST00000618441.5	protein_coding	139293778,139307239,139314675,139315697,139316076,139317053,139317596,139318908,139319334,139321898,139322463,139322598,139325440,139326163,139329345	139294028,139308327,139314736,139315738,139316188,139317105,139317721,139319033,139319501,139322029,139322506,139322967,139325662,139326284,139330441	Gene ID= ENSG00000015479.18 TPM= 17.19 Transcript Type= protein_coding
chr5	139293722	139330405	139293722	139330405	+	ENST00000502499.5@MATR3	ENST00000502499.5	protein_coding	139293722,139315697,139316076,139317053,139317596,139318908,139319334,139321898,139322463,139322598,139325440,139326163,139329345	139293805,139315738,139316188,139317105,139317721,139319033,139319501,139322029,139322506,139322967,139325662,139326284,139330405	Gene ID= ENSG00000015479.18 TPM= 2.34 Transcript Type= protein_coding
chr5	139341832	139369698	139341832	139369698	+	ENST00000265192.8@PAIP2	ENST00000265192.8	protein_coding	139341832,139363759,139364564,139368733	139341980,139363922,139364743,139369698	Gene ID= ENSG00000120727.12 TPM= 187.98 Transcript Type= protein_coding
chr5	139387569	139389883	139387569	139389883	-	ENST00000503120.5@MZB1	ENST00000503120.5	protein_coding	139388461,139388021,139387569	139389883,139388131,139387921	Gene ID= ENSG00000170476.15 TPM= 1.17 Transcript Type= retained_intron
chr5	139390592	139395713	139390592	139395713	-	ENST00000434752.3@PROB1	ENST00000434752.3	protein_coding	139390592	139395713	Gene ID= ENSG00000228672.3 TPM= 7.01 Transcript Type= protein_coding
chr5	139410203	139439526	139410203	139439526	-	ENST00000302060.9@DNAJC18	ENST00000302060.9	protein_coding	139439406,139437372,139428538,139426172,139425005,139422708,139420053,139410203	139439526,139437558,139428683,139426357,139425114,139422817,139420225,139414272	Gene ID= ENSG00000170464.9 TPM= 5.84 Transcript Type= protein_coding
chr5	139448560	139462744	139448560	139462744	-	transcript3700.chr5.nnic@AC142391.1	transcript3700.chr5.nnic	protein_coding	139462610,139458139,139457757,139457545,139456474,139455323,139454825,139454602,139449078,139448560	139462744,139458183,139457807,139457604,139456518,139455436,139454923,139454638,139449174,139448770	Gene ID= ENSG00000279686.1 TPM= 8.17 Transcript Type= NA
chr5	139448556	139462743	139448556	139462743	-	ENST00000618155.2@ECSCR	ENST00000618155.2	protein_coding	139462610,139458139,139457757,139457545,139456474,139455323,139454825,139454602,139449078,139448556	139462743,139458183,139457807,139457604,139456518,139455436,139454923,139454638,139449174,139448908	Gene ID= ENSG00000249751.3 TPM= 24.52 Transcript Type= protein_coding
chr5	139475964	139482790	139475964	139482790	-	ENST00000330794.8@TMEM173	ENST00000330794.8	protein_coding	139482550,139482210,139481478,139481159,139480790,139478270,139477329,139475964	139482790,139482302,139481704,139481342,139480898,139478508,139477515,139476454	Gene ID= ENSG00000184584.12 TPM= 10.51 Transcript Type= protein_coding
chr5	139475534	139482310	139475534	139482310	-	transcript3708.chr5.nic@TMEM173	transcript3708.chr5.nic	protein_coding	139482210,139481478,139481159,139480790,139478270,139477329,139475534	139482310,139481704,139481342,139480898,139478508,139477515,139476454	Gene ID= ENSG00000184584.12 TPM= 51.99 Transcript Type= NA
chr5	139475534	139482761	139475534	139482761	-	transcript3710.chr5.nic@TMEM173	transcript3710.chr5.nic	protein_coding	139482550,139482210,139481159,139480790,139478270,139477329,139475534	139482761,139482302,139481704,139480898,139478508,139477515,139476454	Gene ID= ENSG00000184584.12 TPM= 13.17 Transcript Type= NA
chr5	139475534	139482761	139475534	139482761	-	transcript3715.chr5.nic@TMEM173	transcript3715.chr5.nic	protein_coding	139482550,139481159,139480790,139478270,139477329,139475534	139482761,139482302,139480898,139478508,139477515,139476454	Gene ID= ENSG00000184584.12 TPM= 7.53 Transcript Type= NA
chr5	139561340	139627692	139561340	139627692	+	transcript3721.chr5.nic@UBE2D2	transcript3721.chr5.nic	protein_coding	139561340,139562244,139600372,139614586,139614697,139614861,139623368,139626756	139561815,139562407,139600435,139614617,139614774,139614966,139623461,139627692	Gene ID= ENSG00000131508.15 TPM= 5.84 Transcript Type= NA
chr5	139561166	139628433	139561166	139628433	+	ENST00000398733.7@UBE2D2	ENST00000398733.7	protein_coding	139561166,139600372,139614586,139614697,139614861,139623368,139626756	139561815,139600435,139614617,139614774,139614966,139623461,139628433	Gene ID= ENSG00000131508.15 TPM= 59.55 Transcript Type= protein_coding
chr5	139648349	139683882	139648349	139683882	+	transcript3737.chr5.nic@CXXC5	transcript3737.chr5.nic	protein_coding	139648349,139679847,139680364,139682863	139648845,139679940,139681447,139683882	Gene ID= ENSG00000171604.11 TPM= 8.17 Transcript Type= NA
chr5	139648292	139683882	139648292	139683882	+	ENST00000302517.7@CXXC5	ENST00000302517.7	protein_coding	139648292,139680364,139682863	139648845,139681447,139683882	Gene ID= ENSG00000171604.11 TPM= 100.41 Transcript Type= protein_coding
chr5	139648933	139683593	139648933	139683593	+	ENST00000511048.1@CXXC5	ENST00000511048.1	protein_coding	139648933,139680364,139682863	139649009,139681447,139683593	Gene ID= ENSG00000171604.11 TPM= 1.17 Transcript Type= protein_coding
chr5	140107783	140115276	140107783	140115276	+	transcript3759.chr5.nnic@PURA	transcript3759.chr5.nnic	protein_coding	140107783,140114041	140108219,140115276	Gene ID= ENSG00000185129.5 TPM= 9.34 Transcript Type= NA
chr5	140107783	140115959	140107783	140115959	+	transcript3760.chr5.nnic@PURA	transcript3760.chr5.nnic	protein_coding	140107783,140114041	140108219,140115959	Gene ID= ENSG00000185129.5 TPM= 2.34 Transcript Type= NA
chr5	140107783	140116019	140107783	140116019	+	transcript3761.chr5.nnic@PURA	transcript3761.chr5.nnic	protein_coding	140107783,140114041	140108219,140116019	Gene ID= ENSG00000185129.5 TPM= 7.01 Transcript Type= NA
chr5	140107783	140116840	140107783	140116840	+	transcript3762.chr5.nnic@PURA	transcript3762.chr5.nnic	protein_coding	140107783,140114041	140108219,140116840	Gene ID= ENSG00000185129.5 TPM= 26.27 Transcript Type= NA
chr5	140107841	140116840	140107841	140116840	+	transcript3764.chr5.nnic@PURA	transcript3764.chr5.nnic	protein_coding	140107841,140114041	140108264,140116840	Gene ID= ENSG00000185129.5 TPM= 11.09 Transcript Type= NA
chr5	140125933	140128808	140125933	140128808	+	transcript3767.chr5.nnic@NA	transcript3767.chr5.nnic	NA	140125933	140128808	Gene ID= novel_gene_chr5_3768 TPM= 8.17 Transcript Type= NA
chr5	140174642	140243789	140174642	140243789	+	ENST00000261811.5@CYSTM1	ENST00000261811.5	protein_coding	140174642,140194446,140243305	140175285,140194652,140243789	Gene ID= ENSG00000120306.9 TPM= 120.85 Transcript Type= protein_coding
chr5	140175123	140243789	140175123	140243789	+	transcript3775.chr5.nnic@CYSTM1	transcript3775.chr5.nnic	protein_coding	140175123,140194446,140243305	140175203,140194652,140243789	Gene ID= ENSG00000120306.9 TPM= 6.42 Transcript Type= NA
chr5	140245039	140303121	140245039	140303121	-	ENST00000261813.8@PFDN1	ENST00000261813.8	protein_coding	140303041,140300416,140281449,140245039	140303121,140300582,140281533,140246057	Gene ID= ENSG00000113068.9 TPM= 79.4 Transcript Type= protein_coding
chr5	140279497	140282007	140279497	140282007	-	transcript3779.chr5.nnic@NA	transcript3779.chr5.nnic	NA	140279497	140282007	Gene ID= novel_gene_chr5_3780 TPM= 2.34 Transcript Type= NA
chr5	140332843	140346631	140332843	140346631	-	ENST00000230990.6@HBEGF	ENST00000230990.6	protein_coding	140346283,140345911,140342635,140335872,140334658,140332843	140346631,140346084,140342812,140336027,140334748,140334280	Gene ID= ENSG00000113070.7 TPM= 81.73 Transcript Type= protein_coding
chr5	140401802	140524115	140401802	140524115	+	transcript3793.chr5.nic@ANKHD1	transcript3793.chr5.nic	protein_coding	140401802,140436104,140438461,140440119,140440995,140445742,140449211,140458625,140459164,140464667,140472239,140482580,140485121,140485589,140486958,140496520,140504821,140505122,140505724,140506835,140507785,140509637,140510019,140512828,140513363,140524066	140402273,140436257,140438617,140440266,140441142,140445975,140449305,140458862,140459355,140464776,140472295,140482667,140485248,140485732,140487060,140497278,140504966,140505233,140505869,140506977,140507998,140509812,140510181,140512923,140513479,140524115	Gene ID= ENSG00000131503.20 TPM= 28.02 Transcript Type= NA
chr5	140401802	140524115	140401802	140524115	+	transcript3795.chr5.nic@ANKHD1	transcript3795.chr5.nic	protein_coding	140401802,140436104,140438503,140440119,140440995,140445742,140449211,140458625,140459164,140464667,140472239,140482580,140485121,140485589,140486958,140496520,140504821,140505122,140505724,140506835,140507785,140509637,140510019,140512828,140513363,140524066	140402273,140436257,140438617,140440266,140441142,140445975,140449305,140458862,140459355,140464776,140472295,140482667,140485248,140485732,140487060,140497278,140504966,140505233,140505869,140506977,140507998,140509812,140510181,140512923,140513479,140524115	Gene ID= ENSG00000131503.20 TPM= 9.34 Transcript Type= NA
chr5	140401802	140524115	140401802	140524115	+	transcript3798.chr5.nic@ANKHD1	transcript3798.chr5.nic	protein_coding	140401802,140436104,140438461,140440119,140440995,140445742,140449211,140458625,140459164,140464667,140472239,140482580,140485121,140485589,140486958,140504821,140505122,140505724,140506835,140507785,140509637,140510019,140512828,140513363,140524066	140402273,140436257,140438617,140440266,140441142,140445975,140449305,140458862,140459355,140464776,140472295,140482667,140485248,140485732,140487060,140504966,140505233,140505869,140506977,140507998,140509812,140510181,140512923,140513479,140524115	Gene ID= ENSG00000131503.20 TPM= 5.25 Transcript Type= NA
chr5	140401802	140524115	140401802	140524115	+	transcript3801.chr5.nic@ANKHD1	transcript3801.chr5.nic	protein_coding	140401802,140436104,140438461,140440119,140440995,140445742,140449211,140458625,140459164,140464667,140482580,140485121,140485589,140487006,140496520,140504821,140505122,140505724,140506835,140507785,140509637,140510019,140512828,140513363,140524066	140402273,140436257,140438617,140440266,140441142,140445975,140449305,140458862,140459355,140464776,140482667,140485248,140485732,140487060,140497278,140504966,140505233,140505869,140506977,140507998,140509812,140510181,140512923,140513479,140524115	Gene ID= ENSG00000131503.20 TPM= 3.5 Transcript Type= NA
chr5	140401802	140524115	140401802	140524115	+	transcript3803.chr5.nic@ANKHD1	transcript3803.chr5.nic	protein_coding	140401802,140436104,140438503,140440119,140440995,140445742,140449211,140458625,140459164,140464667,140482580,140485121,140485589,140486958,140496520,140504821,140505122,140505724,140506835,140507785,140509637,140510019,140512828,140513363,140524066	140402273,140436257,140438617,140440266,140441142,140445975,140449305,140458862,140459355,140464776,140482667,140485248,140485732,140487060,140497278,140504966,140505233,140505869,140506977,140507998,140509812,140510181,140512923,140513479,140524115	Gene ID= ENSG00000131503.20 TPM= 4.67 Transcript Type= NA
chr5	140401802	140524115	140401802	140524115	+	transcript3804.chr5.nic@ANKHD1	transcript3804.chr5.nic	protein_coding	140401802,140436104,140438461,140440119,140440995,140445742,140449211,140458625,140459164,140464667,140482580,140485121,140485589,140486958,140504821,140505122,140505724,140506835,140507785,140509637,140510019,140512828,140513363,140524066	140402273,140436257,140438617,140440266,140441142,140445975,140449305,140458862,140459355,140464776,140482667,140485248,140485732,140487060,140504966,140505233,140505869,140506977,140507998,140509812,140510181,140512923,140513479,140524115	Gene ID= ENSG00000131503.20 TPM= 9.34 Transcript Type= NA
chr5	140526153	140539849	140526153	140539849	+	ENST00000432301.5@ANKHD1	ENST00000432301.5	protein_coding	140526153,140526928,140527873,140528184,140537389,140538086,140538919,140539359	140526443,140527074,140528022,140529796,140537589,140538261,140539083,140539849	Gene ID= ENSG00000131503.20 TPM= 1.17 Transcript Type= protein_coding
chr5	140401854	140472477	140401854	140472477	+	ENST00000394723.7@ANKHD1	ENST00000394723.7	protein_coding	140401854,140436104,140438461,140440119,140440995,140445742,140449211,140458625,140459164,140464667,140472239	140402273,140436257,140438617,140440266,140441142,140445975,140449305,140458862,140459355,140464776,140472477	Gene ID= ENSG00000131503.20 TPM= 10.51 Transcript Type= protein_coding
chr5	140401802	140524115	140401802	140524115	+	transcript3800.chr5.nic@ANKHD1-EIF4EBP3	transcript3800.chr5.nic	protein_coding	140401802,140436104,140438461,140440119,140440995,140445742,140449211,140458625,140459164,140464667,140482580,140485121,140485589,140486958,140496520,140504821,140505122,140505724,140506835,140507785,140509637,140510019,140512828,140513363,140524066	140402273,140436257,140438617,140440266,140441142,140445975,140449305,140458862,140459355,140464776,140482667,140485248,140485732,140487060,140497278,140504966,140505233,140505869,140506977,140507998,140509812,140510181,140512923,140513479,140524115	Gene ID= ENSG00000254996.5 TPM= 28.61 Transcript Type= NA
chr5	140547666	140549578	140547666	140549578	+	ENST00000310331.2@EIF4EBP3	ENST00000310331.2	protein_coding	140547666,140548906,140549234	140547840,140549076,140549578	Gene ID= ENSG00000243056.1 TPM= 15.18 Transcript Type= protein_coding
chr5	140550068	140557456	140550068	140557456	-	ENST00000602775.5@SRA1	ENST00000602775.5	protein_coding	140557147,140551982,140551061,140550068	140557456,140552184,140551169,140550911	Gene ID= ENSG00000213523.10 TPM= 2.34 Transcript Type= retained_intron
chr5	140558268	140564600	140558268	140564600	-	transcript3828.chr5.nic@APBB3	transcript3828.chr5.nic	protein_coding	140564197,140563752,140563594,140562663,140562353,140561587,140561365,140561018,140560639,140560313,140558268	140564600,140563915,140563670,140562723,140562499,140562227,140561449,140561101,140560754,140560504,140558821	Gene ID= ENSG00000113108.19 TPM= 13.43 Transcript Type= NA
chr5	140564835	140569098	140564835	140569098	+	ENST00000612662.1@SLC35A4	ENST00000612662.1	protein_coding	140564835,140565873,140566565	140564858,140565971,140569098	Gene ID= ENSG00000176087.14 TPM= 131.94 Transcript Type= protein_coding
chr5	140631728	140633701	140631728	140633701	-	ENST00000302014.10@CD14	ENST00000302014.10	protein_coding	140633069,140631728	140633701,140632980	Gene ID= ENSG00000170458.13 TPM= 163.46 Transcript Type= protein_coding
chr5	140645285	140647785	140645285	140647785	-	ENST00000252102.8@NDUFA2	ENST00000252102.8	protein_coding	140647483,140647256,140645285	140647785,140647362,140645678	Gene ID= ENSG00000131495.8 TPM= 14.01 Transcript Type= protein_coding
chr5	140645369	140647645	140645369	140647645	-	ENST00000512088.1@NDUFA2	ENST00000512088.1	protein_coding	140647483,140647256,140645369	140647645,140647362,140645725	Gene ID= ENSG00000131495.8 TPM= 2.34 Transcript Type= protein_coding
chr5	140639427	140645402	140639427	140645402	+	ENST00000394671.7@TMCO6	ENST00000394671.7	protein_coding	140639427,140639739,140641665,140641870,140642315,140642586,140642925,140643564,140643780,140644100,140644573,140644985	140639612,140639851,140641780,140642053,140642419,140642671,140643041,140643675,140643966,140644194,140644740,140645402	Gene ID= ENSG00000113119.12 TPM= 10.51 Transcript Type= protein_coding
chr5	140647770	140662478	140647770	140662478	+	ENST00000417647.6@IK	ENST00000417647.6	protein_coding	140647770,140648471,140651714,140652088,140652977,140653938,140654516,140654681,140655829,140657554,140658737,140658939,140659315,140659756,140660115,140660758,140661620,140661899,140662179,140662302	140647924,140648537,140651806,140652147,140653144,140654052,140654586,140654727,140655992,140657662,140658776,140659164,140659333,140659834,140660195,140660815,140661708,140662007,140662213,140662478	Gene ID= ENSG00000113141.17 TPM= 190.32 Transcript Type= protein_coding
chr5	140664812	140674119	140664812	140674119	+	transcript3873.chr5.nic@WDR55	transcript3873.chr5.nic	protein_coding	140664812,140668234,140668415,140668612,140668891,140669079,140669333,140671269	140665103,140668334,140668502,140668791,140668990,140669248,140669690,140674119	Gene ID= ENSG00000120314.18 TPM= 4.67 Transcript Type= NA
chr5	140664852	140670959	140664852	140670959	+	transcript3875.chr5.nnic@WDR55	transcript3875.chr5.nnic	protein_coding	140664852,140667044,140668234,140668415,140668612,140668891,140669079,140669333	140665103,140667113,140668334,140668502,140668791,140668990,140669248,140670959	Gene ID= ENSG00000120314.18 TPM= 3.12 Transcript Type= NA
chr5	140664858	140670959	140664858	140670959	+	transcript3884.chr5.nic@WDR55	transcript3884.chr5.nic	protein_coding	140664858,140668234,140668415,140668612,140668891,140669333	140665103,140668334,140668502,140668791,140669248,140670959	Gene ID= ENSG00000120314.18 TPM= 3.12 Transcript Type= NA
chr5	140664863	140670959	140664863	140670959	+	transcript3888.chr5.nic@WDR55	transcript3888.chr5.nic	protein_coding	140664863,140668234,140668612,140668891,140669333	140665103,140668502,140668791,140669248,140670959	Gene ID= ENSG00000120314.18 TPM= 4.29 Transcript Type= NA
chr5	140673904	140691324	140673904	140691324	-	transcript3863.chr5.nic@HARS	transcript3863.chr5.nic	protein_coding	140691215,140690855,140683546,140683100,140679788,140679002,140677908,140677655,140677327,140676989,140676654,140675017,140674679,140673904	140691324,140690944,140683667,140683219,140679883,140679127,140678015,140677753,140677420,140677116,140676896,140675133,140674825,140674328	Gene ID= ENSG00000170445.12 TPM= 2.34 Transcript Type= NA
chr5	140673173	140692024	140673173	140692024	-	ENST00000504156.5@HARS	ENST00000504156.5	protein_coding	140691215,140690855,140683100,140679788,140679002,140677908,140677655,140677327,140676989,140676654,140675017,140674679,140673173	140692024,140690944,140683219,140679883,140679127,140678015,140677753,140677420,140677116,140676896,140675133,140674825,140674328	Gene ID= ENSG00000170445.12 TPM= 84.07 Transcript Type= protein_coding
chr5	140686604	140691364	140686604	140691364	-	transcript3892.chr5.nic@HARS	transcript3892.chr5.nic	protein_coding	140691215,140686604	140691364,140690944	Gene ID= ENSG00000170445.12 TPM= 2.34 Transcript Type= NA
chr5	140691453	140699291	140691453	140699291	+	transcript3893.chr5.nic@HARS2	transcript3893.chr5.nic	protein_coding	140691453,140691607,140693591,140693935,140694185,140695508,140695738,140696103,140696521,140696943,140697164,140697569,140697932,140698493	140691515,140691756,140693665,140694054,140694280,140695633,140695845,140696201,140696614,140697070,140697406,140697685,140698078,140699291	Gene ID= ENSG00000112855.14 TPM= 4.09 Transcript Type= NA
chr5	140691426	140699291	140691426	140699291	+	ENST00000230771.7@HARS2	ENST00000230771.7	protein_coding	140691426,140693591,140693935,140694185,140695508,140695738,140696103,140696521,140696943,140697164,140697569,140697932,140698493	140691756,140693665,140694054,140694280,140695633,140695845,140696201,140696614,140697070,140697406,140697685,140698078,140699291	Gene ID= ENSG00000112855.14 TPM= 18.1 Transcript Type= protein_coding
chr5	140691462	140699291	140691462	140699291	+	transcript3897.chr5.nic@HARS2	transcript3897.chr5.nic	protein_coding	140691462,140693491,140693935,140694185,140695508,140695738,140696103,140696521,140696943,140697164,140697569,140697932,140698493	140691756,140693665,140694054,140694280,140695633,140695845,140696201,140696614,140697070,140697406,140697685,140698078,140699291	Gene ID= ENSG00000112855.14 TPM= 4.67 Transcript Type= NA
chr5	140691455	140699291	140691455	140699291	+	transcript3900.chr5.nic@HARS2	transcript3900.chr5.nic	protein_coding	140691455,140693591,140693935,140694185,140695508,140695738,140696521,140696943,140697164,140697569,140697932,140698493	140691756,140693665,140694054,140694280,140695633,140696201,140696614,140697070,140697406,140697685,140698078,140699291	Gene ID= ENSG00000112855.14 TPM= 2.34 Transcript Type= NA
chr5	140700334	140706676	140700334	140706676	+	ENST00000274712.7@ZMAT2	ENST00000274712.7	protein_coding	140700334,140700819,140702006,140703918,140704426,140705613	140700478,140700912,140702129,140703991,140704571,140706676	Gene ID= ENSG00000146007.10 TPM= 9.34 Transcript Type= protein_coding
chr5	140711275	140711373	140711275	140711373	+	ENST00000363120.1@VTRNA1-1	ENST00000363120.1	misc_RNA	140711275	140711373	Gene ID= ENSG00000199990.1 TPM= 1.17 Transcript Type= misc_RNA
chr5	140726158	140726246	140726158	140726246	+	ENST00000365645.1@VTRNA1-3	ENST00000365645.1	misc_RNA	140726158	140726246	Gene ID= ENSG00000202515.1 TPM= 2.34 Transcript Type= misc_RNA
chr5	140821776	141012344	140821776	141012344	+	ENST00000529859.1@PCDHA5	ENST00000529859.1	protein_coding	140821776,140978949,140982475,141009627	140824127,140979007,140982563,141012344	Gene ID= ENSG00000204965.8 TPM= 4.67 Transcript Type= protein_coding
chr5	140966741	141011579	140966741	141011579	+	transcript3910.chr5.nic@PCDHA11	transcript3910.chr5.nic	protein_coding	140966741,140978949,140982475,141009627,141010166	140969331,140979007,140982563,141009728,141011579	Gene ID= ENSG00000249158.6 TPM= 5.84 Transcript Type= NA
chr5	140926549	140931742	140926549	140931742	+	transcript3920.chr5.nnic@NA	transcript3920.chr5.nnic	NA	140926549	140931742	Gene ID= novel_gene_chr5_3921 TPM= 4.67 Transcript Type= NA
chr5	141094578	141098703	141094578	141098703	+	ENST00000194155.6@PCDHB2	ENST00000194155.6	protein_coding	141094578	141098703	Gene ID= ENSG00000112852.6 TPM= 1.17 Transcript Type= protein_coding
chr5	141100473	141103827	141100473	141103827	+	ENST00000231130.3@PCDHB3	ENST00000231130.3	protein_coding	141100473	141103827	Gene ID= ENSG00000113205.5 TPM= 2.34 Transcript Type= protein_coding
chr5	141121799	141125623	141121799	141125623	+	ENST00000194152.3@PCDHB4	ENST00000194152.3	protein_coding	141121799	141125623	Gene ID= ENSG00000081818.3 TPM= 3.5 Transcript Type= protein_coding
chr5	141136108	141138121	141136108	141138121	+	transcript3926.chr5.nnic@NA	transcript3926.chr5.nnic	NA	141136108	141138121	Gene ID= novel_gene_chr5_3927 TPM= 3.5 Transcript Type= NA
chr5	141150022	141153287	141150022	141153287	+	ENST00000231136.3@PCDHB6	ENST00000231136.3	protein_coding	141150022	141153287	Gene ID= ENSG00000113211.5 TPM= 1.17 Transcript Type= protein_coding
chr5	141172618	141175480	141172618	141175480	+	transcript3928.chr5.nnic@NA	transcript3928.chr5.nnic	NA	141172618	141175480	Gene ID= novel_gene_chr5_3929 TPM= 10.51 Transcript Type= NA
chr5	141199582	141203779	141199582	141203779	+	ENST00000354757.4@PCDHB11	ENST00000354757.4	protein_coding	141199582	141203779	Gene ID= ENSG00000197479.6 TPM= 3.5 Transcript Type= protein_coding
chr5	141213944	141217019	141213944	141217019	+	transcript3930.chr5.nnic@NA	transcript3930.chr5.nnic	NA	141213944	141217019	Gene ID= novel_gene_chr5_3931 TPM= 3.5 Transcript Type= NA
chr5	141245349	141249365	141245349	141249365	+	ENST00000231173.5@PCDHB15	ENST00000231173.5	protein_coding	141245349	141249365	Gene ID= ENSG00000113248.5 TPM= 4.67 Transcript Type= protein_coding
chr5	141318488	141320821	141318488	141320821	-	ENST00000313368.7@TAF7	ENST00000313368.7	protein_coding	141318488	141320821	Gene ID= ENSG00000178913.7 TPM= 218.34 Transcript Type= protein_coding
chr5	141338972	141512979	141338972	141512979	+	ENST00000394576.2@PCDHGA2	ENST00000394576.2	protein_coding	141338972,141494807,141505393,141510947	141341395,141494865,141505481,141512979	Gene ID= ENSG00000081853.14 TPM= 5.09 Transcript Type= protein_coding
chr5	141343868	141512979	141343868	141512979	+	ENST00000253812.7@PCDHGA3	ENST00000253812.7	protein_coding	141343868,141494807,141505393,141510947	141346457,141494865,141505481,141512979	Gene ID= ENSG00000254245.2 TPM= 2.76 Transcript Type= protein_coding
chr5	141355025	141512979	141355025	141512979	+	ENST00000571252.2@PCDHGA4	ENST00000571252.2	protein_coding	141355025,141494807,141505393,141510947	141357621,141494865,141505481,141512979	Gene ID= ENSG00000262576.2 TPM= 2.76 Transcript Type= protein_coding
chr5	141360136	141512979	141360136	141512979	+	ENST00000522605.1@PCDHGB2	ENST00000522605.1	protein_coding	141360136,141494807,141505393,141510947	141362556,141494865,141505481,141512979	Gene ID= ENSG00000253910.2 TPM= 1.59 Transcript Type= protein_coding
chr5	141364331	141512979	141364331	141512979	+	ENST00000518069.1@PCDHGA5	ENST00000518069.1	protein_coding	141364331,141494807,141505393,141510947	141366751,141494865,141505481,141512979	Gene ID= ENSG00000253485.2 TPM= 5.09 Transcript Type= protein_coding
chr5	141382739	141386000	141382739	141386000	+	ENST00000617050.1@PCDHGA7	ENST00000617050.1	protein_coding	141382739	141386000	Gene ID= ENSG00000253537.2 TPM= 1.17 Transcript Type= protein_coding
chr5	141387698	141392422	141387698	141392422	+	ENST00000615384.1@PCDHGB4	ENST00000615384.1	protein_coding	141387698	141392422	Gene ID= ENSG00000253953.2 TPM= 2.34 Transcript Type= protein_coding
chr5	141402953	141512979	141402953	141512979	+	ENST00000573521.1@PCDHGA9	ENST00000573521.1	protein_coding	141402953,141494807,141505393,141510947	141405376,141494865,141505481,141512979	Gene ID= ENSG00000261934.2 TPM= 1.59 Transcript Type= protein_coding
chr5	141417645	141420429	141417645	141420429	+	ENST00000612073.1@PCDHGB7	ENST00000612073.1	protein_coding	141417645	141420429	Gene ID= ENSG00000254122.2 TPM= 4.67 Transcript Type= protein_coding
chr5	141417691	141512979	141417691	141512979	+	ENST00000398594.3@PCDHGB7	ENST00000398594.3	protein_coding	141417691,141494807,141505393,141510947	141420274,141494865,141505481,141512979	Gene ID= ENSG00000254122.2 TPM= 9.76 Transcript Type= protein_coding
chr5	141421195	141512979	141421195	141512979	+	ENST00000398587.6@PCDHGA11	ENST00000398587.6	protein_coding	141421195,141494807,141505393,141510947	141423660,141494865,141505481,141512979	Gene ID= ENSG00000253873.5 TPM= 2.76 Transcript Type= protein_coding
chr5	141430618	141512979	141430618	141512979	+	ENST00000252085.3@PCDHGA12	ENST00000252085.3	protein_coding	141430618,141494807,141505393,141510947	141433183,141494865,141505481,141512979	Gene ID= ENSG00000253159.2 TPM= 3.92 Transcript Type= protein_coding
chr5	141476003	141512979	141476003	141512979	+	ENST00000308177.4@PCDHGC3	ENST00000308177.4	protein_coding	141476003,141494807,141505393,141510947	141478546,141494865,141505481,141512979	Gene ID= ENSG00000240184.6 TPM= 111.34 Transcript Type= protein_coding
chr5	141475980	141512977	141475980	141512977	+	ENST00000617641.4@PCDHGC3	ENST00000617641.4	protein_coding	141475980,141494807,141505393,141510947	141476146,141494865,141505481,141512977	Gene ID= ENSG00000240184.6 TPM= 104.34 Transcript Type= protein_coding
chr5	141515022	141619195	141515022	141619195	-	transcript3955.chr5.nic@DIAPH1	transcript3955.chr5.nic	protein_coding	141618798,141588224,141587042,141584124,141583485,141583206,141582312,141580744,141579088,141578515,141578225,141577475,141576756,141576230,141574967,141573492,141571926,141550499,141534335,141529603,141529172,141528702,141528453,141527573,141526297,141526038,141524143,141515022	141619195,141588250,141587197,141584225,141583615,141583292,141582375,141580883,141579196,141578625,141578343,141577591,141576871,141576294,141575146,141574208,141572040,141550507,141534433,141529697,141529273,141528941,141528582,141527697,141526461,141526173,141524229,141517008	Gene ID= ENSG00000131504.15 TPM= 148.87 Transcript Type= NA
chr5	141515022	141619055	141515022	141619055	-	ENST00000389057.9@DIAPH1	ENST00000389057.9	protein_coding	141618798,141587042,141584124,141583485,141583206,141582312,141580744,141579088,141578515,141578225,141577475,141576756,141576230,141574967,141573492,141571926,141534335,141529603,141529172,141528702,141528453,141527573,141526297,141526038,141524143,141515022	141619055,141587197,141584225,141583615,141583292,141582375,141580883,141579196,141578625,141578343,141577591,141576871,141576294,141575146,141574208,141572040,141534442,141529697,141529273,141528941,141528582,141527697,141526461,141526173,141524229,141517008	Gene ID= ENSG00000131504.15 TPM= 42.62 Transcript Type= protein_coding
chr5	141620876	141636870	141620876	141636870	-	ENST00000305264.7@HDAC3	ENST00000305264.7	protein_coding	141636736,141636548,141634811,141630044,141629860,141629684,141629173,141628559,141628114,141627893,141626194,141626013,141625685,141625208,141620876	141636870,141636630,141634953,141630125,141629916,141629739,141629306,141628639,141628187,141627957,141626283,141626071,141625764,141625365,141621537	Gene ID= ENSG00000171720.9 TPM= 81.32 Transcript Type= protein_coding
chr5	141620876	141636868	141620876	141636868	-	transcript3965.chr5.nic@HDAC3	transcript3965.chr5.nic	protein_coding	141636736,141634811,141630044,141629860,141629684,141629173,141628559,141628114,141627893,141626194,141626013,141625685,141625208,141620876	141636868,141636630,141630125,141629916,141629739,141629306,141628639,141628187,141627957,141626283,141626071,141625764,141625365,141621537	Gene ID= ENSG00000171720.9 TPM= 2.63 Transcript Type= NA
chr5	141620876	141636868	141620876	141636868	-	transcript3966.chr5.nic@HDAC3	transcript3966.chr5.nic	protein_coding	141636736,141636548,141630044,141629860,141629684,141629173,141628559,141628114,141627893,141626194,141626013,141625685,141625208,141620876	141636868,141636630,141630125,141629916,141629739,141629306,141628639,141628187,141627957,141626283,141626071,141625764,141625365,141621537	Gene ID= ENSG00000171720.9 TPM= 10.1 Transcript Type= NA
chr5	141620876	141636868	141620876	141636868	-	transcript3967.chr5.nic@HDAC3	transcript3967.chr5.nic	protein_coding	141636736,141636548,141634811,141629860,141629684,141629173,141628559,141628114,141627893,141626194,141626013,141625685,141625208,141620876	141636868,141636630,141634953,141630125,141629739,141629306,141628639,141628187,141627957,141626283,141626071,141625764,141625365,141621537	Gene ID= ENSG00000171720.9 TPM= 3.09 Transcript Type= NA
chr5	141620876	141636868	141620876	141636868	-	transcript3970.chr5.nic@HDAC3	transcript3970.chr5.nic	protein_coding	141636736,141636548,141634811,141629860,141629684,141629173,141628114,141627893,141626013,141625685,141625208,141620876	141636868,141636630,141634953,141630125,141629739,141629306,141628639,141627957,141626283,141625764,141625365,141621537	Gene ID= ENSG00000171720.9 TPM= 2.8 Transcript Type= NA
chr5	141636950	141641063	141636950	141641063	+	ENST00000444782.5@RELL2	ENST00000444782.5	protein_coding	141636950,141638170,141638795,141638955,141639464,141639920,141640412,141640671	141637741,141638409,141638860,141639021,141639649,141640295,141640445,141641063	Gene ID= ENSG00000164620.8 TPM= 7.01 Transcript Type= protein_coding
chr5	141637005	141641064	141637005	141641064	+	ENST00000518025.5@RELL2	ENST00000518025.5	protein_coding	141637005,141638795,141639464,141639920,141640412,141640671	141638409,141638860,141639649,141640295,141640445,141641064	Gene ID= ENSG00000164620.8 TPM= 9.34 Transcript Type= processed_transcript
chr5	141637026	141641077	141637026	141641077	+	ENST00000297164.7@RELL2	ENST00000297164.7	protein_coding	141637026,141638795,141638955,141639464,141639920,141640412,141640671	141638409,141638860,141639021,141639649,141640295,141640445,141641077	Gene ID= ENSG00000164620.8 TPM= 5.84 Transcript Type= protein_coding
chr5	141637442	141641053	141637442	141641053	+	ENST00000518856.1@RELL2	ENST00000518856.1	protein_coding	141637442,141638795,141638955,141639464,141639920,141640412,141640671	141637748,141638860,141639021,141639649,141640295,141640445,141641053	Gene ID= ENSG00000164620.8 TPM= 1.17 Transcript Type= protein_coding
chr5	141639302	141651419	141639302	141651419	-	ENST00000435817.6@FCHSD1	ENST00000435817.6	protein_coding	141651348,141651020,141650359,141649887,141649395,141649172,141648957,141647968,141647398,141647135,141646603,141646087,141645771,141645020,141644859,141644573,141644218,141643001,141641702,141639302	141651419,141651117,141650404,141649954,141649536,141649308,141649020,141648096,141647520,141647230,141646722,141646191,141645932,141645148,141644942,141644690,141644438,141643088,141641757,141641563	Gene ID= ENSG00000197948.10 TPM= 7.01 Transcript Type= protein_coding
chr5	141640982	141651423	141640982	141651423	-	transcript3983.chr5.nic@FCHSD1	transcript3983.chr5.nic	protein_coding	141651348,141651020,141650359,141649887,141649395,141649172,141648957,141647968,141647398,141647135,141646087,141645771,141645020,141644859,141644573,141644218,141643001,141641702,141640982	141651423,141651117,141650404,141649954,141649530,141649308,141649020,141648096,141647520,141647230,141646722,141645932,141645148,141644942,141644690,141644438,141643088,141641757,141641563	Gene ID= ENSG00000197948.10 TPM= 2.34 Transcript Type= NA
chr5	141653401	141682221	141653401	141682221	-	ENST00000239440.8@ARAP3	ENST00000239440.8	protein_coding	141682173,141679963,141679761,141679545,141673605,141673401,141673013,141672741,141672552,141672102,141671895,141671570,141671265,141670512,141669922,141669709,141666424,141665311,141664922,141662043,141661684,141659779,141659408,141658579,141658365,141656718,141656504,141656194,141656064,141655869,141655621,141655362,141653401	141682221,141680503,141679822,141679656,141673808,141673470,141673133,141672925,141672658,141672301,141671980,141671752,141671400,141670628,141670063,141669811,141666643,141665374,141665085,141662255,141661789,141659926,141659476,141658653,141658479,141656846,141656637,141656276,141656099,141655932,141655758,141655400,141654435	Gene ID= ENSG00000120318.15 TPM= 24.52 Transcript Type= protein_coding
chr5	141813293	141815990	141813293	141815990	-	transcript4008.chr5.nnic@NA	transcript4008.chr5.nnic	NA	141813293	141815990	Gene ID= novel_gene_chr5_4009 TPM= 2.34 Transcript Type= NA
chr5	141853111	141878410	141853111	141878410	-	ENST00000287008.7@PCDH1	ENST00000287008.7	protein_coding	141878223,141868569,141863232,141857252,141853111	141878410,141869431,141865427,141857471,141854436	Gene ID= ENSG00000156453.13 TPM= 18.68 Transcript Type= protein_coding
chr5	141862652	141878410	141862652	141878410	-	ENST00000394536.4@PCDH1	ENST00000394536.4	protein_coding	141878223,141868569,141862652	141878410,141869431,141865427	Gene ID= ENSG00000156453.13 TPM= 52.54 Transcript Type= protein_coding
chr5	141923807	141940146	141923807	141940146	+	transcript4015.chr5.nnic@KIAA0141	transcript4015.chr5.nnic	protein_coding	141923807,141924581,141925410,141928151,141929582,141929989,141930178,141933259,141934240,141934494,141937198,141938521,141938852,141939506	141923972,141924695,141925527,141928298,141929740,141930074,141930274,141933401,141934398,141934586,141937357,141938760,141938904,141940146	Gene ID= ENSG00000081791.8 TPM= 3.64 Transcript Type= NA
chr5	141923807	141940154	141923807	141940154	+	transcript4016.chr5.nnic@KIAA0141	transcript4016.chr5.nnic	protein_coding	141923807,141924581,141925410,141928151,141929582,141929989,141930178,141933259,141934240,141934494,141937198,141938521,141938852,141939554	141923972,141924695,141925527,141928298,141929740,141930074,141930274,141933401,141934398,141934586,141937357,141938760,141938904,141940154	Gene ID= ENSG00000081791.8 TPM= 3.64 Transcript Type= NA
chr5	141923807	141940152	141923807	141940152	+	transcript4017.chr5.nnic@KIAA0141	transcript4017.chr5.nnic	protein_coding	141923807,141924581,141925410,141928151,141929582,141929989,141930178,141933259,141934240,141934494,141937198,141938521,141939506	141923972,141924695,141925527,141928298,141929740,141930074,141930274,141933401,141934398,141934586,141937357,141938760,141940152	Gene ID= ENSG00000081791.8 TPM= 14.15 Transcript Type= NA
chr5	141923808	141942047	141923808	141942047	+	ENST00000432126.6@KIAA0141	ENST00000432126.6	protein_coding	141923808,141924581,141925410,141928151,141929582,141929989,141930178,141933259,141934240,141934494,141937198,141938521	141923972,141924695,141925527,141928298,141929740,141930074,141930274,141933401,141934398,141934586,141937357,141942047	Gene ID= ENSG00000081791.8 TPM= 3.64 Transcript Type= protein_coding
chr5	141923807	141935546	141923807	141935546	+	transcript4025.chr5.nic@KIAA0141	transcript4025.chr5.nic	protein_coding	141923807,141924581,141925410,141928151,141929582,141929989,141930178,141933259,141934240,141934494	141923972,141924695,141925527,141928298,141929740,141930074,141930274,141933401,141934398,141935546	Gene ID= ENSG00000081791.8 TPM= 3.64 Transcript Type= NA
chr5	141923807	141934175	141923807	141934175	+	transcript4026.chr5.nic@KIAA0141	transcript4026.chr5.nic	protein_coding	141923807,141924581,141925410,141928151,141929582,141929989,141930178,141933259	141923972,141924695,141925527,141928298,141929740,141930074,141930274,141934175	Gene ID= ENSG00000081791.8 TPM= 2.48 Transcript Type= NA
chr5	141923855	141940120	141923855	141940120	+	ENST00000194118.8@KIAA0141	ENST00000194118.8	protein_coding	141923855,141924581,141925410,141928151,141929582,141929989,141930178,141933259,141934240,141934494,141937198,141938521,141939554	141923972,141924695,141925527,141928298,141929740,141930074,141930274,141933401,141934398,141934586,141937357,141938760,141940120	Gene ID= ENSG00000081791.8 TPM= 5.98 Transcript Type= protein_coding
chr5	141943585	141959062	141943585	141959062	-	ENST00000231484.3@PCDH12	ENST00000231484.3	protein_coding	141954972,141951493,141949432,141943585	141959062,141951590,141949583,141945805	Gene ID= ENSG00000113555.5 TPM= 12.84 Transcript Type= protein_coding
chr5	141969095	141988418	141969095	141988418	+	transcript4033.chr5.nnic@RNF14	transcript4033.chr5.nnic	protein_coding	141969095,141970704,141973583,141974804,141978303,141980123,141983380,141984803,141987733,141988096	141969167,141970877,141973742,141974955,141978830,141980351,141983552,141984933,141987975,141988418	Gene ID= ENSG00000013561.17 TPM= 2.92 Transcript Type= NA
chr5	141969039	141990291	141969039	141990291	+	ENST00000394520.6@RNF14	ENST00000394520.6	protein_coding	141969039,141970704,141973583,141974804,141978303,141980123,141983380,141984803,141987733	141969167,141970877,141973742,141974955,141978830,141980351,141983552,141984933,141990291	Gene ID= ENSG00000013561.17 TPM= 7.01 Transcript Type= protein_coding
chr5	141969161	141989185	141969161	141989185	+	transcript4042.chr5.nic@RNF14	transcript4042.chr5.nic	protein_coding	141969161,141970704,141973583,141974804,141978303,141980123,141983380,141984803,141987733	141969234,141970877,141973742,141974955,141978830,141980351,141983552,141984933,141989185	Gene ID= ENSG00000013561.17 TPM= 7.59 Transcript Type= NA
chr5	141968886	141990290	141968886	141990290	+	ENST00000347642.7@RNF14	ENST00000347642.7	protein_coding	141968886,141973583,141974804,141978303,141980123,141983380,141984803,141987733	141969167,141973742,141974955,141978830,141980351,141983552,141984933,141990290	Gene ID= ENSG00000013561.17 TPM= 2.34 Transcript Type= protein_coding
chr5	141969111	141989185	141969111	141989185	+	ENST00000394514.6@RNF14	ENST00000394514.6	protein_coding	141969111,141970704,141973583,141978303,141980123,141983380,141984803,141987733	141969167,141970877,141973742,141978830,141980351,141983552,141984933,141989185	Gene ID= ENSG00000013561.17 TPM= 5.84 Transcript Type= protein_coding
chr5	142000674	142013030	142000674	142013030	-	ENST00000500692.6@GNPDA1	ENST00000500692.6	protein_coding	142012995,142012288,142011912,142007799,142006144,142004932,142003088,142000674	142013030,142012339,142012041,142007900,142006326,142005116,142003262,142002129	Gene ID= ENSG00000113552.15 TPM= 10.12 Transcript Type= protein_coding
chr5	142000678	142012973	142000678	142012973	-	ENST00000503794.5@GNPDA1	ENST00000503794.5	protein_coding	142012669,142012288,142011912,142007799,142006144,142004932,142003088,142000678	142012973,142012377,142012041,142007900,142006326,142005116,142003262,142002129	Gene ID= ENSG00000113552.15 TPM= 4.87 Transcript Type= protein_coding
chr5	142000669	142013031	142000669	142013031	-	ENST00000311337.10@GNPDA1	ENST00000311337.10	protein_coding	142012995,142011912,142007799,142006144,142004932,142003088,142000669	142013031,142012041,142007900,142006326,142005116,142003262,142002129	Gene ID= ENSG00000113552.15 TPM= 78.43 Transcript Type= protein_coding
chr5	142010513	142013029	142010513	142013029	-	transcript4063.chr5.nnic@NA	transcript4063.chr5.nnic	NA	142010513	142013029	Gene ID= novel_gene_chr5_4064 TPM= 2.34 Transcript Type= NA
chr5	142108505	142154443	142108505	142154443	+	ENST00000253814.5@NDFIP1	ENST00000253814.5	protein_coding	142108505,142131808,142132212,142135730,142137734,142140563,142144571,142151731	142109037,142131895,142132342,142135817,142137858,142140629,142144676,142154443	Gene ID= ENSG00000131507.10 TPM= 30.36 Transcript Type= protein_coding
chr5	142155338	142159253	142155338	142159253	-	transcript4080.chr5.nnic@NA	transcript4080.chr5.nnic	NA	142155338	142159253	Gene ID= novel_gene_chr5_4081 TPM= 8.17 Transcript Type= NA
chr5	142317621	142322555	142317621	142322555	-	transcript4085.chr5.nnic@NA	transcript4085.chr5.nnic	NA	142317621	142322555	Gene ID= novel_gene_chr5_4086 TPM= 3.5 Transcript Type= NA
chr5	142592179	142698070	142592179	142698070	-	ENST00000621536.4@FGF1	ENST00000621536.4	protein_coding	142697622,142613959,142600702,142592179	142698070,142614161,142600805,142595484	Gene ID= ENSG00000113578.17 TPM= 1.17 Transcript Type= protein_coding
chr5	142774416	142776362	142774416	142776362	-	transcript4101.chr5.nnic@NA	transcript4101.chr5.nnic	NA	142774416	142776362	Gene ID= novel_gene_chr5_4102 TPM= 3.5 Transcript Type= NA
chr5	143031574	143034130	143031574	143034130	-	transcript4099.chr5.nnic@NA	transcript4099.chr5.nnic	NA	143031574	143034130	Gene ID= novel_gene_chr5_4100 TPM= 4.67 Transcript Type= NA
chr5	143398357	143403715	143398357	143403715	-	transcript4119.chr5.nic@NR3C1	transcript4119.chr5.nic	protein_coding	143403211,143398357	143403715,143400852	Gene ID= ENSG00000113580.14 TPM= 14.98 Transcript Type= NA
chr5	143398357	143404587	143398357	143404587	-	transcript4120.chr5.nic@NR3C1	transcript4120.chr5.nic	protein_coding	143404376,143398357	143404587,143400852	Gene ID= ENSG00000113580.14 TPM= 9.92 Transcript Type= NA
chr5	143281162	143403689	143281162	143403689	-	ENST00000231509.7@NR3C1	ENST00000231509.7	protein_coding	143403211,143399656,143313999,143310097,143300485,143298668,143295460,143282568,143281162	143403689,143400852,143314168,143310213,143300763,143298812,143295590,143282725,143282041	Gene ID= ENSG00000113580.14 TPM= 188.37 Transcript Type= protein_coding
chr5	143390425	143391684	143390425	143391684	+	transcript4122.chr5.nnic@NA	transcript4122.chr5.nnic	NA	143390425	143391684	Gene ID= novel_gene_chr5_4123 TPM= 2.34 Transcript Type= NA
chr5	144158159	144170659	144158159	144170659	-	ENST00000274496.9@YIPF5	ENST00000274496.9	protein_coding	144170535,144169846,144165432,144164111,144162218,144158159	144170659,144169965,144165604,144164256,144162399,144160559	Gene ID= ENSG00000145817.16 TPM= 31.53 Transcript Type= protein_coding
chr5	145759019	145835364	145759019	145835364	-	transcript4131.chr5.nic@PRELID2	transcript4131.chr5.nic	protein_coding	145835177,145823077,145819945,145817894,145796442,145764931,145759019	145835364,145823134,145820018,145818054,145796547,145765000,145760525	Gene ID= ENSG00000186314.11 TPM= 3.5 Transcript Type= NA
chr5	145936579	146063316	145936579	146063316	+	ENST00000359120.8@SH3RF2	ENST00000359120.8	protein_coding	145936579,145937823,146000058,146004058,146013747,146047772,146049075,146055981,146059866,146062426	145936694,145938306,146000327,146004153,146014061,146047863,146049245,146056213,146060224,146063316	Gene ID= ENSG00000156463.17 TPM= 10.51 Transcript Type= protein_coding
chr5	146113038	146182660	146113038	146182660	-	ENST00000394434.6@LARS	ENST00000394434.6	protein_coding	146182488,146177547,146172687,146171910,146168128,146164310,146160374,146159407,146157728,146157403,146153893,146153734,146153174,146151862,146149622,146144624,146144472,146144267,146143412,146142872,146140204,146135601,146132898,146131019,146130018,146128978,146128672,146126435,146123982,146122492,146120371,146113038	146182660,146177665,146172774,146171990,146168265,146164471,146160486,146159470,146157795,146157628,146153980,146153810,146153227,146152002,146149699,146144709,146144537,146144349,146143550,146143084,146140261,146135664,146133081,146131109,146130158,146129118,146128782,146126545,146124086,146122587,146120503,146114311	Gene ID= ENSG00000133706.17 TPM= 22.18 Transcript Type= protein_coding
chr5	146203550	146339251	146203550	146339251	+	ENST00000506502.2@AC091959.3	ENST00000506502.2	protein_coding	146203550,146218985,146223403,146228946,146229717,146230657,146233450,146237298,146254943,146258449,146260745,146261510,146263491,146267649,146269207,146269420,146270954,146271483,146314896,146339103	146203824,146219103,146223527,146229037,146229910,146230917,146233743,146237432,146255092,146258593,146260898,146261806,146263631,146267768,146269281,146269584,146271058,146271674,146315018,146339251	Gene ID= ENSG00000275740.1 TPM= 1.17 Transcript Type= protein_coding
chr5	146447312	146511961	146447312	146511961	+	ENST00000296702.9@TCERG1	ENST00000296702.9	protein_coding	146447312,146455056,146457183,146458884,146463551,146468341,146469544,146470636,146471488,146478493,146479855,146480028,146482592,146483540,146492920,146498536,146503375,146503824,146507028,146507873,146509145,146510441	146447408,146455281,146457335,146459337,146463793,146468403,146469744,146470748,146471576,146478653,146479911,146480094,146482727,146483629,146493038,146498686,146503539,146504006,146507207,146507956,146509245,146511961	Gene ID= ENSG00000113649.11 TPM= 2.34 Transcript Type= protein_coding
chr5	146447311	146480216	146447311	146480216	+	ENST00000507175.5@TCERG1	ENST00000507175.5	protein_coding	146447311,146455056,146457183,146458884,146463551,146469544,146470636,146471488,146478493,146479855,146480028	146447408,146455281,146457335,146459337,146463793,146469744,146470748,146471576,146478653,146479911,146480216	Gene ID= ENSG00000113649.11 TPM= 3.5 Transcript Type= retained_intron
chr5	146589507	146878765	146589507	146878765	-	ENST00000394411.8@PPP2R2B	ENST00000394411.8	protein_coding	146878591,146878002,146701045,146697979,146691128,146650547,146638251,146600291,146592971,146589507	146878765,146878195,146701142,146698144,146691240,146650724,146638415,146600460,146593062,146590226	Gene ID= ENSG00000156475.18 TPM= 2.34 Transcript Type= protein_coding
chr5	146581146	146878642	146581146	146878642	-	ENST00000394409.7@PPP2R2B	ENST00000394409.7	protein_coding	146878002,146701045,146697979,146691128,146650547,146638251,146600291,146592971,146581146	146878642,146701142,146698144,146691240,146650724,146638415,146600460,146593062,146590226	Gene ID= ENSG00000156475.18 TPM= 1.17 Transcript Type= protein_coding
chr5	147234963	147387852	147234963	147387852	+	ENST00000397936.7@STK32A	ENST00000397936.7	protein_coding	147234963,147239539,147278124,147279247,147323898,147343006,147351065,147361517,147370654,147373169,147375090,147383441,147383890	147235199,147239686,147278179,147279398,147324071,147343043,147351154,147361614,147370770,147373294,147375218,147383505,147387852	Gene ID= ENSG00000169302.14 TPM= 4.67 Transcript Type= protein_coding
chr5	147235026	147364235	147235026	147364235	+	transcript4183.chr5.nic@STK32A	transcript4183.chr5.nic	protein_coding	147235026,147239539,147278124,147279247,147323898,147343006,147351065,147361517	147235199,147239686,147278179,147279398,147324071,147343043,147351154,147364235	Gene ID= ENSG00000169302.14 TPM= 4.67 Transcript Type= NA
chr5	147235106	147348830	147235106	147348830	+	ENST00000626951.2@STK32A	ENST00000626951.2	protein_coding	147235106,147239539,147278124,147279247,147323898,147343006,147348695	147235199,147239686,147278179,147279398,147324071,147343043,147348830	Gene ID= ENSG00000169302.14 TPM= 1.17 Transcript Type= protein_coding
chr5	147390811	147453959	147390811	147453959	-	ENST00000398514.7@DPYSL3	ENST00000398514.7	protein_coding	147453549,147424875,147418447,147415709,147413596,147412608,147408728,147405610,147401540,147400692,147399082,147397666,147395559,147390811	147453959,147424963,147418631,147415873,147413657,147412688,147408796,147405730,147401696,147400833,147399252,147397845,147395721,147394123	Gene ID= ENSG00000113657.12 TPM= 88.74 Transcript Type= protein_coding
chr5	147390812	147510056	147390812	147510056	-	ENST00000343218.9@DPYSL3	ENST00000343218.9	protein_coding	147509478,147424875,147418447,147415709,147413596,147412608,147408728,147405610,147401540,147400692,147399082,147397666,147395559,147390812	147510056,147424963,147418631,147415873,147413657,147412688,147408796,147405730,147401696,147400833,147399252,147397845,147395721,147394123	Gene ID= ENSG00000113657.12 TPM= 50.21 Transcript Type= protein_coding
chr5	147585439	147782848	147585439	147782848	-	ENST00000616793.4@JAKMIP2	ENST00000616793.4	protein_coding	147782456,147671678,147660948,147650338,147648376,147644850,147644058,147641708,147640704,147639632,147636965,147636222,147632680,147631413,147629693,147628751,147623621,147620666,147617911,147612306,147601741,147585439	147782848,147671954,147661445,147650547,147648474,147644996,147644198,147641764,147640823,147639760,147637048,147636284,147632778,147631511,147629746,147628816,147623689,147620743,147618114,147612371,147601811,147591686	Gene ID= ENSG00000176049.15 TPM= 1.17 Transcript Type= protein_coding
chr5	147588566	147782775	147588566	147782775	-	ENST00000265272.9@JAKMIP2	ENST00000265272.9	protein_coding	147782456,147671678,147660948,147650338,147648376,147644850,147644058,147641708,147640704,147639632,147636965,147636222,147632680,147631413,147629693,147628751,147623621,147620666,147617911,147612306,147588566	147782775,147671954,147661445,147650547,147648474,147644996,147644198,147641764,147640823,147639760,147637048,147636284,147632778,147631511,147629746,147628816,147623689,147620743,147618114,147612371,147591686	Gene ID= ENSG00000176049.15 TPM= 1.17 Transcript Type= protein_coding
chr5	147591362	147782768	147591362	147782768	-	ENST00000333010.6@JAKMIP2	ENST00000333010.6	protein_coding	147782456,147660948,147650338,147648376,147644850,147644058,147641708,147640704,147639632,147636965,147636222,147632680,147631413,147629693,147628751,147623621,147620666,147617911,147612306,147601741,147591362	147782768,147661445,147650547,147648474,147644996,147644198,147641764,147640823,147639760,147637048,147636284,147632778,147631511,147629746,147628816,147623689,147620743,147618114,147612371,147601811,147591686	Gene ID= ENSG00000176049.15 TPM= 1.17 Transcript Type= protein_coding
chr5	147872018	147882191	147872018	147882191	+	ENST00000514688.1@SCGB3A2	ENST00000514688.1	protein_coding	147872018,147881446,147882027	147872321,147881648,147882191	Gene ID= ENSG00000164265.8 TPM= 8.17 Transcript Type= processed_transcript
chr5	147878711	147882190	147878711	147882190	+	ENST00000296694.4@SCGB3A2	ENST00000296694.4	protein_coding	147878711,147881446,147882027	147878858,147881648,147882190	Gene ID= ENSG00000164265.8 TPM= 68.89 Transcript Type= protein_coding
chr5	148131122	148137289	148131122	148137289	+	transcript4207.chr5.nic@SPINK5	transcript4207.chr5.nic	protein_coding	148131122,148133797,148136983	148131389,148133887,148137289	Gene ID= ENSG00000133710.15 TPM= 3.5 Transcript Type= NA
chr5	148383935	148442836	148383935	148442836	+	ENST00000340253.9@FBXO38	ENST00000340253.9	protein_coding	148383935,148394714,148398999,148401982,148402348,148404685,148406257,148409124,148410635,148414136,148415928,148416994,148423998,148425522,148427213,148433424,148433635,148438332,148439647,148440424,148441124,148441969	148384039,148394904,148399132,148402145,148402513,148404822,148406394,148409217,148410765,148414306,148416070,148417204,148424117,148425701,148427947,148433524,148433737,148438498,148439792,148440527,148441237,148442836	Gene ID= ENSG00000145868.16 TPM= 9.34 Transcript Type= protein_coding
chr5	148383935	148442827	148383935	148442827	+	ENST00000296701.10@FBXO38	ENST00000296701.10	protein_coding	148383935,148394714,148398999,148401982,148402348,148404685,148406257,148409124,148410635,148414136,148415928,148416994,148423998,148425522,148433424,148433635,148438332,148439647,148440424,148441124,148441969	148384039,148394904,148399132,148402145,148402513,148404822,148406394,148409217,148410765,148414306,148416070,148417204,148424117,148425701,148433524,148433737,148438498,148439792,148440527,148441237,148442827	Gene ID= ENSG00000145868.16 TPM= 4.67 Transcript Type= protein_coding
chr5	148383947	148398430	148383947	148398430	+	transcript4224.chr5.nic@FBXO38	transcript4224.chr5.nic	protein_coding	148383947,148394714	148384039,148398430	Gene ID= ENSG00000145868.16 TPM= 2.34 Transcript Type= NA
chr5	148384002	148442836	148384002	148442836	+	ENST00000394370.7@FBXO38	ENST00000394370.7	protein_coding	148384002,148394714,148398999,148401982,148402348,148404685,148406257,148409124,148410635,148414136,148415928,148416994,148423998,148425522,148427213,148433424,148433635,148438332,148439647,148440424,148441124,148441969	148384039,148394904,148399132,148402145,148402513,148404822,148406394,148409217,148410765,148414306,148416070,148417204,148424117,148425701,148427722,148433524,148433737,148438498,148439792,148440527,148441237,148442836	Gene ID= ENSG00000145868.16 TPM= 4.67 Transcript Type= protein_coding
chr5	148389748	148390029	148389748	148390029	+	ENST00000612673.1@Metazoa_SRP	ENST00000612673.1	misc_RNA	148389748	148390029	Gene ID= ENSG00000274799.1 TPM= 1.17 Transcript Type= misc_RNA
chr5	148826611	148876438	148826611	148876438	+	transcript4226.chr5.nnic@ADRB2	transcript4226.chr5.nnic	protein_coding	148826611,148872504,148875904	148828005,148872589,148876438	Gene ID= ENSG00000169252.5 TPM= 2.92 Transcript Type= NA
chr5	148826611	148873499	148826611	148873499	+	transcript4230.chr5.nnic@ADRB2	transcript4230.chr5.nnic	protein_coding	148826611,148872504	148828005,148873499	Gene ID= ENSG00000169252.5 TPM= 6.42 Transcript Type= NA
chr5	149141475	149260439	149141475	149260439	+	transcript4242.chr5.nic@ABLIM3	transcript4242.chr5.nic	protein_coding	149141475,149142009,149183452,149198219,149200316,149207008,149210726,149216959,149230649,149233229,149239759,149244881,149246482,149247782,149249815,149250447,149251359,149252201,149252757,149258291	149141654,149142108,149183589,149198402,149200428,149207134,149210819,149217046,149230707,149233300,149239888,149245015,149246546,149247929,149249844,149250505,149251419,149252208,149252837,149260439	Gene ID= ENSG00000173210.19 TPM= 15.38 Transcript Type= NA
chr5	149141739	149260439	149141739	149260439	+	transcript4244.chr5.nic@ABLIM3	transcript4244.chr5.nic	protein_coding	149141739,149183452,149198219,149200316,149207008,149210726,149216959,149230649,149233229,149239759,149242491,149244881,149246482,149247782,149249815,149250447,149251359,149252201,149252757,149258291	149142108,149183589,149198402,149200428,149207134,149210819,149217046,149230707,149233300,149239888,149242538,149245015,149246546,149247929,149249844,149250505,149251419,149252208,149252837,149260439	Gene ID= ENSG00000173210.19 TPM= 22.97 Transcript Type= NA
chr5	149141739	149260439	149141739	149260439	+	transcript4246.chr5.nic@ABLIM3	transcript4246.chr5.nic	protein_coding	149141739,149183452,149198219,149200316,149207008,149210726,149216959,149230649,149233229,149239759,149244881,149246482,149247782,149249815,149250447,149251359,149252201,149252757,149258291	149142108,149183589,149198402,149200428,149207134,149210819,149217046,149230707,149233300,149239888,149245015,149246546,149247929,149249844,149250505,149251419,149252208,149252837,149260439	Gene ID= ENSG00000173210.19 TPM= 6.04 Transcript Type= NA
chr5	149271871	149341802	149271871	149341802	+	ENST00000296721.8@AFAP1L1	ENST00000296721.8	protein_coding	149271871,149299509,149300271,149301133,149302418,149306306,149307402,149309956,149312112,149315821,149316151,149317729,149319582,149320391,149322606,149329666,149332695,149335594,149340007	149271984,149299637,149300354,149301230,149302526,149306404,149307613,149310135,149312204,149315914,149316303,149317940,149319727,149320463,149322717,149329830,149332873,149335722,149341802	Gene ID= ENSG00000157510.13 TPM= 32.69 Transcript Type= protein_coding
chr5	149271836	149341802	149271836	149341802	+	transcript4274.chr5.nnic@AFAP1L1	transcript4274.chr5.nnic	protein_coding	149271836,149299509,149300271,149301133,149302418,149307402,149309956,149312112,149315821,149316151,149317729,149319582,149320391,149322606,149329666,149332695,149335594,149340007	149271984,149299637,149300354,149301230,149302526,149307613,149310135,149312204,149315914,149316303,149317940,149319727,149320463,149322717,149329830,149332873,149335722,149341802	Gene ID= ENSG00000157510.13 TPM= 4.67 Transcript Type= NA
chr5	149271871	149312375	149271871	149312375	+	ENST00000455574.6@AFAP1L1	ENST00000455574.6	protein_coding	149271871,149299509,149300271,149301133,149302418,149306306,149307402,149309956,149312112	149271984,149299637,149300354,149301230,149302526,149306404,149307613,149310135,149312375	Gene ID= ENSG00000157510.13 TPM= 1.17 Transcript Type= retained_intron
chr5	149345430	149354583	149345430	149354583	+	ENST00000329271.7@GRPEL2	ENST00000329271.7	protein_coding	149345430,149348272,149349654,149350918	149345616,149348425,149349735,149354583	Gene ID= ENSG00000164284.14 TPM= 12.26 Transcript Type= protein_coding
chr5	149345619	149354583	149345619	149354583	+	ENST00000507562.1@GRPEL2	ENST00000507562.1	protein_coding	149345619,149348272,149349654,149350918	149345825,149348425,149349735,149354583	Gene ID= ENSG00000164284.14 TPM= 4.09 Transcript Type= processed_transcript
chr5	149358007	149369653	149358007	149369653	+	ENST00000274569.8@PCYOX1L	ENST00000274569.8	protein_coding	149358007,149362637,149364036,149365942,149367360,149367993	149358156,149362843,149364210,149366153,149367500,149369653	Gene ID= ENSG00000145882.10 TPM= 19.27 Transcript Type= protein_coding
chr5	149362240	149369653	149362240	149369653	+	ENST00000514349.1@PCYOX1L	ENST00000514349.1	protein_coding	149362240,149364036,149365942,149367360,149367993	149362843,149364210,149366153,149367500,149369653	Gene ID= ENSG00000145882.10 TPM= 4.09 Transcript Type= protein_coding
chr5	149406877	149425662	149406877	149425662	+	ENST00000519898.5@CARMN	ENST00000519898.5	lincRNA	149406877,149421481,149424090,149425097	149407078,149421601,149424397,149425662	Gene ID= ENSG00000249669.9 TPM= 3.5 Transcript Type= lincRNA
chr5	149406880	149412783	149406880	149412783	+	transcript4293.chr5.nnic@NA	transcript4293.chr5.nnic	NA	149406880	149412783	Gene ID= novel_gene_chr5_4294 TPM= 2.34 Transcript Type= NA
chr5	149494339	149551395	149494339	149551395	-	transcript4297.chr5.nic@CSNK1A1	transcript4297.chr5.nic	protein_coding	149550842,149550075,149525045,149520290,149517794,149513070,149511794,149509879,149507027,149505483,149494339	149551395,149550181,149525171,149520388,149517877,149513209,149511872,149509953,149507133,149505595,149496860	Gene ID= ENSG00000113712.17 TPM= 14.01 Transcript Type= NA
chr5	149495896	149551552	149495896	149551552	-	ENST00000377843.6@CSNK1A1	ENST00000377843.6	protein_coding	149550842,149550075,149525045,149520290,149513070,149511794,149509879,149507027,149505447,149495896	149551552,149550181,149525171,149520388,149513209,149511872,149509953,149507133,149505595,149496860	Gene ID= ENSG00000113712.17 TPM= 27.56 Transcript Type= protein_coding
chr5	149516472	149551474	149516472	149551474	-	transcript4325.chr5.nic@CSNK1A1	transcript4325.chr5.nic	protein_coding	149550842,149550075,149525045,149516472	149551474,149550181,149525171,149520388	Gene ID= ENSG00000113712.17 TPM= 5.84 Transcript Type= NA
chr5	149528179	149530976	149528179	149530976	+	transcript4328.chr5.nnic@NA	transcript4328.chr5.nnic	NA	149528179	149530976	Gene ID= novel_gene_chr5_4329 TPM= 7.01 Transcript Type= NA
chr5	149581323	149634968	149581323	149634968	+	transcript4337.chr5.nnic@ARHGEF37	transcript4337.chr5.nnic	protein_coding	149581323,149597759,149601108,149609548,149616567,149618176,149618938,149621733,149624012,149627076,149628809,149631982	149581624,149597955,149601231,149609695,149616766,149618306,149619042,149622062,149624140,149627271,149628966,149634968	Gene ID= ENSG00000183111.11 TPM= 2.34 Transcript Type= NA
chr5	149581352	149634968	149581352	149634968	+	transcript4339.chr5.nnic@ARHGEF37	transcript4339.chr5.nnic	protein_coding	149581352,149601108,149609548,149616567,149618176,149618938,149620354,149621733,149624012,149627076,149628809,149631982	149581624,149601231,149609695,149616766,149618306,149619042,149620464,149622062,149624140,149627271,149628966,149634968	Gene ID= ENSG00000183111.11 TPM= 3.5 Transcript Type= NA
chr5	149581323	149624801	149581323	149624801	+	transcript4340.chr5.nic@ARHGEF37	transcript4340.chr5.nic	protein_coding	149581323,149597759,149601108,149609548,149616567,149618176,149618938,149620354,149621733	149581624,149597955,149601231,149609695,149616766,149618306,149619042,149620464,149624801	Gene ID= ENSG00000183111.11 TPM= 2.34 Transcript Type= NA
chr5	149581473	149634968	149581473	149634968	+	ENST00000333677.6@ARHGEF37	ENST00000333677.6	protein_coding	149581473,149597759,149601108,149609548,149616567,149618176,149618938,149620354,149621733,149624012,149627076,149628809,149631982	149581624,149597955,149601231,149609695,149616766,149618306,149619042,149620464,149622062,149624140,149627271,149628966,149634968	Gene ID= ENSG00000183111.11 TPM= 4.67 Transcript Type= protein_coding
chr5	149731747	149734810	149731747	149734810	+	transcript4347.chr5.nnic@NA	transcript4347.chr5.nnic	NA	149731747	149734810	Gene ID= novel_gene_chr5_4348 TPM= 2.34 Transcript Type= NA
chr5	149960767	149987400	149960767	149987400	+	transcript4369.chr5.nnic@SLC26A2	transcript4369.chr5.nnic	protein_coding	149960767,149977628,149980293,149984397	149960979,149978351,149983829,149987400	Gene ID= ENSG00000155850.7 TPM= 5.25 Transcript Type= NA
chr5	149960737	149987405	149960737	149987405	+	ENST00000286298.4@SLC26A2	ENST00000286298.4	protein_coding	149960737,149977628,149980293	149960979,149978351,149987405	Gene ID= ENSG00000155850.7 TPM= 9.92 Transcript Type= protein_coding
chr5	149993118	150001167	149993118	150001167	-	ENST00000296736.3@TIGD6	ENST00000296736.3	protein_coding	150000474,149993118	150001167,149996429	Gene ID= ENSG00000164296.6 TPM= 1.17 Transcript Type= protein_coding
chr5	149994728	150000654	149994728	150000654	-	ENST00000515406.2@TIGD6	ENST00000515406.2	protein_coding	149999928,149994728	150000654,149996429	Gene ID= ENSG00000164296.6 TPM= 4.67 Transcript Type= protein_coding
chr5	150000046	150053142	150000046	150053142	+	ENST00000613459.4@HMGXB3	ENST00000613459.4	protein_coding	150000046,150000454,150004851,150006473,150010111,150012255,150018566,150024262,150026706,150027020,150030741,150032454,150036636,150037400,150040748,150041785,150045466,150047624,150048569,150050252,150051725	150000055,150001179,150004989,150006647,150010608,150012353,150018697,150024680,150026881,150027117,150030839,150032603,150036937,150037527,150040879,150041969,150045685,150047757,150048685,150050461,150053142	Gene ID= ENSG00000113716.12 TPM= 44.95 Transcript Type= protein_coding
chr5	150000697	150053142	150000697	150053142	+	transcript4362.chr5.nnic@HMGXB3	transcript4362.chr5.nnic	protein_coding	150000697,150004851,150006473,150012255,150018566,150024262,150026706,150027020,150030741,150032454,150036636,150037400,150040748,150041785,150045466,150047624,150048569,150050252,150051725	150001179,150004989,150006647,150012353,150018697,150024680,150026881,150027117,150030839,150032603,150036937,150037527,150040879,150041969,150045685,150047757,150048685,150050461,150053142	Gene ID= ENSG00000113716.12 TPM= 20.43 Transcript Type= NA
chr5	150027078	150053142	150027078	150053142	+	transcript4367.chr5.nic@HMGXB3	transcript4367.chr5.nic	protein_coding	150027078,150032454,150036636,150037400,150040748,150041785,150045466,150047624,150048569,150050252,150051725	150030839,150032603,150036937,150037527,150040879,150041969,150045685,150047757,150048685,150050461,150053142	Gene ID= ENSG00000113716.12 TPM= 10.51 Transcript Type= NA
chr5	150019126	150022188	150019126	150022188	-	transcript4380.chr5.nnic@NA	transcript4380.chr5.nnic	NA	150019126	150022188	Gene ID= novel_gene_chr5_4381 TPM= 3.5 Transcript Type= NA
chr5	150053291	150086621	150053291	150086621	-	transcript4354.chr5.nic@CSF1R	transcript4354.chr5.nic	protein_coding	150086379,150080767,150080052,150078112,150077276,150073301,150070456,150070182,150069873,150068215,150061723,150061491,150060862,150059700,150057504,150057287,150056219,150056026,150055237,150054322,150053291	150086621,150081024,150080336,150078248,150077435,150073493,150070571,150070302,150070063,150068330,150061849,150061595,150060972,150059862,150057592,150057384,150056341,150056137,150055336,150054430,150054224	Gene ID= ENSG00000182578.13 TPM= 120.26 Transcript Type= NA
chr5	150113837	150155887	150113837	150155887	-	transcript4382.chr5.nnic@PDGFRB	transcript4382.chr5.nnic	protein_coding	150155397,150137008,150135555,150134750,150133881,150133586,150132750,150131979,150130539,150129757,150126520,150125445,150124727,150124250,150123042,150121880,150121204,150120888,150120012,150119467,150119095,150118747,150117618,150113837	150155887,150137053,150135878,150135016,150134008,150133760,150132942,150132094,150130662,150129968,150126614,150125577,150124831,150124360,150123201,150122040,150121322,150121010,150120123,150119566,150119196,150118852,150117850,150115946	Gene ID= ENSG00000113721.13 TPM= 3.89 Transcript Type= NA
chr5	150113837	150155839	150113837	150155839	-	transcript4383.chr5.nnic@PDGFRB	transcript4383.chr5.nnic	protein_coding	150155397,150151557,150137008,150135555,150134750,150133881,150133586,150132750,150131979,150130539,150129757,150126520,150125445,150124727,150124250,150123042,150121880,150121204,150120888,150120012,150119467,150118747,150117618,150113837	150155839,150151690,150137053,150135878,150135016,150134008,150133760,150132942,150132094,150130662,150129968,150126614,150125577,150124831,150124360,150123201,150122040,150121322,150121010,150120123,150119566,150118852,150117850,150115946	Gene ID= ENSG00000113721.13 TPM= 5.06 Transcript Type= NA
chr5	150113837	150155860	150113837	150155860	-	ENST00000261799.8@PDGFRB	ENST00000261799.8	protein_coding	150155397,150137008,150135555,150134750,150133881,150133586,150132750,150131979,150130539,150129757,150126520,150125445,150124727,150124250,150123042,150121880,150121204,150120888,150120012,150119467,150118747,150117618,150113837	150155860,150137053,150135878,150135016,150134008,150133760,150132942,150132094,150130662,150129968,150126614,150125577,150124831,150124360,150123201,150122040,150121322,150121010,150120123,150119566,150118852,150117850,150115946	Gene ID= ENSG00000113721.13 TPM= 191.87 Transcript Type= protein_coding
chr5	150296343	150302953	150296343	150302953	-	ENST00000328668.7@ARSI	ENST00000328668.7	protein_coding	150302063,150296343	150302953,150298612	Gene ID= ENSG00000183876.8 TPM= 18.68 Transcript Type= protein_coding
chr5	150357639	150400307	150357639	150400307	+	ENST00000377797.7@TCOF1	ENST00000377797.7	protein_coding	150357639,150361156,150364113,150367844,150368716,150369529,150372006,150374174,150374617,150374954,150375339,150375721,150376082,150376423,150378905,150379229,150379532,150387902,150389887,150391544,150391957,150392708,150393372,150396282,150398354,150399022,150399810	150357854,150361211,150364252,150367917,150368902,150369602,150372236,150374386,150374811,150375163,150375554,150375909,150376330,150376620,150379042,150379408,150379732,150388088,150390023,150391657,150392176,150392790,150393552,150396842,150398451,150399070,150400307	Gene ID= ENSG00000070814.17 TPM= 2.72 Transcript Type= protein_coding
chr5	150357666	150400292	150357666	150400292	+	ENST00000445265.6@TCOF1	ENST00000445265.6	protein_coding	150357666,150361156,150364113,150367844,150368716,150369529,150374174,150374617,150374954,150375339,150375721,150376082,150376423,150378905,150379229,150379532,150387902,150389887,150391544,150391957,150392705,150393372,150396282,150398354,150399022,150399810	150357854,150361211,150364252,150367917,150368902,150369602,150374386,150374811,150375163,150375554,150375909,150376330,150376620,150379042,150379408,150379732,150388088,150390023,150391657,150392176,150392790,150393552,150396842,150398451,150399070,150400292	Gene ID= ENSG00000070814.17 TPM= 6.81 Transcript Type= protein_coding
chr5	150357666	150396843	150357666	150396843	+	transcript4397.chr5.nic@TCOF1	transcript4397.chr5.nic	protein_coding	150357666,150361156,150364113,150367844,150368716,150369529,150372006,150374174,150374617,150374954,150375339,150375721,150376082,150376423,150378905,150379229,150379532,150387902,150389887,150391957,150392705,150393372,150396282	150357854,150361211,150364252,150367917,150368902,150369602,150372236,150374386,150374811,150375163,150375554,150375909,150376330,150376620,150379042,150379408,150379732,150388088,150390023,150392176,150392790,150393552,150396843	Gene ID= ENSG00000070814.17 TPM= 10.51 Transcript Type= NA
chr5	150357719	150398369	150357719	150398369	+	ENST00000427724.6@TCOF1	ENST00000427724.6	protein_coding	150357719,150361156,150364113,150367844,150368716,150369529,150372006,150374174,150374617,150374954,150375339,150375721,150376082,150376423,150378905,150379229,150379532,150387902,150389887,150391957,150392708,150393372,150396282,150398354	150357854,150361211,150364252,150367917,150368902,150369602,150372236,150374386,150374811,150375163,150375554,150375909,150376330,150376620,150379042,150379408,150379732,150388088,150390023,150392176,150392790,150393552,150396842,150398369	Gene ID= ENSG00000070814.17 TPM= 14.01 Transcript Type= protein_coding
chr5	150357672	150400308	150357672	150400308	+	ENST00000323668.11@TCOF1	ENST00000323668.11	protein_coding	150357672,150361156,150364113,150367844,150368716,150369529,150374174,150374617,150374954,150375339,150375721,150376082,150376423,150378905,150379229,150379532,150387902,150389887,150391544,150391957,150392708,150393372,150396282,150398354,150399022,150399810	150357854,150361211,150364252,150367917,150368902,150369602,150374386,150374811,150375163,150375554,150375909,150376330,150376620,150379042,150379408,150379732,150388088,150390023,150391657,150392176,150392790,150393552,150396842,150398451,150399070,150400308	Gene ID= ENSG00000070814.17 TPM= 2.14 Transcript Type= protein_coding
chr5	150401670	150412929	150401670	150412929	-	ENST00000353334.10@CD74	ENST00000353334.10	protein_coding	150412625,150407152,150406881,150406259,150405085,150404680,150402563,150401670	150412929,150407324,150406960,150406321,150405180,150404767,150402625,150402250	Gene ID= ENSG00000019582.14 TPM= 3438.45 Transcript Type= protein_coding
chr5	150402152	150412751	150402152	150412751	-	ENST00000009530.11@CD74	ENST00000009530.11	protein_coding	150412625,150407152,150406881,150406259,150405085,150404680,150403121,150402563,150402152	150412751,150407324,150406960,150406321,150405180,150404767,150403312,150402625,150402250	Gene ID= ENSG00000019582.14 TPM= 11.17 Transcript Type= protein_coding
chr5	150444231	150449756	150444231	150449756	-	ENST00000407193.5@RPS14	ENST00000407193.5	protein_coding	150449486,150447585,150446802,150445609,150444231	150449756,150447735,150446963,150445685,150444353	Gene ID= ENSG00000164587.11 TPM= 33.86 Transcript Type= protein_coding
chr5	150444238	150449757	150444238	150449757	-	transcript4453.chr5.nnic@RPS14	transcript4453.chr5.nnic	protein_coding	150449703,150447674,150446802,150445609,150444238	150449757,150447735,150446963,150445685,150444353	Gene ID= ENSG00000164587.11 TPM= 32.69 Transcript Type= NA
chr5	150443190	150449747	150443190	150449747	-	ENST00000401695.7@RPS14	ENST00000401695.7	protein_coding	150449703,150447585,150446802,150445609,150443190	150449747,150447735,150446963,150445685,150444353	Gene ID= ENSG00000164587.11 TPM= 19.85 Transcript Type= protein_coding
chr5	150444238	150449727	150444238	150449727	-	ENST00000519690.1@RPS14	ENST00000519690.1	protein_coding	150446802,150445609,150444238	150449727,150445685,150444353	Gene ID= ENSG00000164587.11 TPM= 10.51 Transcript Type= retained_intron
chr5	150444238	150449696	150444238	150449696	-	ENST00000312037.5@RPS14	ENST00000312037.5	protein_coding	150449492,150447585,150446802,150445609,150444238	150449696,150447735,150446963,150445685,150444353	Gene ID= ENSG00000164587.11 TPM= 29.19 Transcript Type= protein_coding
chr5	150485780	150558211	150485780	150558211	+	transcript4466.chr5.nnic@NDST1	transcript4466.chr5.nnic	protein_coding	150485780,150520868,150527804,150532945,150534867,150535700,150539228,150540082,150541570,150542848,150545312,150548218,150549678,150551753,150553213	150486023,150521767,150528298,150533032,150535021,150535885,150539356,150540264,150541666,150542971,150545486,150548388,150549787,150551855,150558211	Gene ID= ENSG00000070614.14 TPM= 4.18 Transcript Type= NA
chr5	150485780	150539768	150485780	150539768	+	transcript4476.chr5.nnic@NDST1	transcript4476.chr5.nnic	protein_coding	150485780,150520868,150527804,150532945,150534867,150535700,150539228	150486023,150521767,150528298,150533032,150535021,150535885,150539768	Gene ID= ENSG00000070614.14 TPM= 8.76 Transcript Type= NA
chr5	150508112	150558211	150508112	150558211	+	ENST00000261797.6@NDST1	ENST00000261797.6	protein_coding	150508112,150520868,150527804,150532945,150534867,150535700,150539228,150540082,150541570,150542848,150545312,150548218,150549678,150551753,150553213	150508226,150521767,150528298,150533032,150535021,150535885,150539356,150540264,150541666,150542971,150545486,150548388,150549787,150551855,150558211	Gene ID= ENSG00000070614.14 TPM= 58.09 Transcript Type= protein_coding
chr5	150640658	150659220	150640658	150659220	+	ENST00000307662.4@SYNPO	ENST00000307662.4	protein_coding	150640658,150647944,150656404	150640854,150650303,150659220	Gene ID= ENSG00000171992.12 TPM= 162.88 Transcript Type= protein_coding
chr5	150601080	150654232	150601080	150654232	+	ENST00000394243.5@SYNPO	ENST00000394243.5	protein_coding	150601080,150618103,150647944	150601188,150618767,150654232	Gene ID= ENSG00000171992.12 TPM= 15.76 Transcript Type= protein_coding
chr5	150690794	150701056	150690794	150701056	-	transcript4488.chr5.nic@RBM22	transcript4488.chr5.nic	protein_coding	150700932,150700444,150699242,150698499,150696791,150696533,150694076,150693219,150692895,150690794	150701056,150700497,150699271,150698631,150696891,150696705,150695706,150693307,150693026,150691881	Gene ID= ENSG00000086589.11 TPM= 4.67 Transcript Type= NA
chr5	150690794	150701107	150690794	150701107	-	ENST00000199814.8@RBM22	ENST00000199814.8	protein_coding	150700932,150700444,150699242,150698499,150696791,150696533,150695506,150694076,150693219,150692895,150690794	150701107,150700497,150699271,150698631,150696891,150696705,150695706,150694240,150693307,150693026,150691881	Gene ID= ENSG00000086589.11 TPM= 64.22 Transcript Type= protein_coding
chr5	150708440	150759109	150708440	150759109	-	ENST00000447998.6@DCTN4	ENST00000447998.6	protein_coding	150758859,150756417,150753479,150742114,150733368,150731416,150731044,150730631,150722907,150719716,150718276,150715565,150708440	150759109,150756487,150753657,150742157,150733475,150731489,150731156,150730740,150722980,150719770,150718383,150715662,150711362	Gene ID= ENSG00000132912.12 TPM= 51.37 Transcript Type= protein_coding
chr5	150708748	150759095	150708748	150759095	-	transcript4491.chr5.nic@DCTN4	transcript4491.chr5.nic	protein_coding	150758859,150756417,150753479,150733368,150731416,150731044,150730631,150722907,150719716,150718276,150715565,150708748	150759095,150756487,150753657,150733475,150731489,150731156,150730740,150722980,150719770,150718383,150715662,150711362	Gene ID= ENSG00000132912.12 TPM= 2.34 Transcript Type= NA
chr5	150777946	150796734	150777946	150796734	+	ENST00000526627.1@SMIM3	ENST00000526627.1	protein_coding	150777946,150795430	150778972,150796734	Gene ID= ENSG00000256235.1 TPM= 75.89 Transcript Type= protein_coding
chr5	150894399	150904789	150894399	150904789	-	ENST00000427179.5@ZNF300	ENST00000427179.5	protein_coding	150904704,150903864,150903141,150898428,150894399	150904789,150903977,150903182,150898554,150898184	Gene ID= ENSG00000145908.12 TPM= 1.17 Transcript Type= protein_coding
chr5	151020438	151028992	151020438	151028992	+	ENST00000622181.4@GPX3	ENST00000622181.4	protein_coding	151020438,151025340,151025472,151026900,151027432,151027909	151020741,151025468,151025493,151027017,151027531,151028992	Gene ID= ENSG00000211445.11 TPM= 34.49 Transcript Type= protein_coding
chr5	151020558	151028988	151020558	151028988	+	transcript4524.chr5.nnic@GPX3	transcript4524.chr5.nnic	protein_coding	151020558,151025340,151026900,151027432,151027909,151028898	151020741,151025493,151027017,151027531,151028770,151028988	Gene ID= ENSG00000211445.11 TPM= 77.03 Transcript Type= NA
chr5	151020590	151028992	151020590	151028992	+	transcript4525.chr5.nic@GPX3	transcript4525.chr5.nic	protein_coding	151020590,151020828,151025340,151026900,151027432,151027909	151020741,151020854,151025493,151027017,151027531,151028992	Gene ID= ENSG00000211445.11 TPM= 90.77 Transcript Type= NA
chr5	151020563	151028993	151020563	151028993	+	ENST00000388825.8@GPX3	ENST00000388825.8	protein_coding	151020563,151025340,151026900,151027432,151027909	151020741,151025493,151027017,151027531,151028993	Gene ID= ENSG00000211445.11 TPM= 2411.07 Transcript Type= protein_coding
chr5	151020589	151028987	151020589	151028987	+	ENST00000614343.4@GPX3	ENST00000614343.4	protein_coding	151020589,151025340,151026900,151027432,151027909,151028903	151020741,151025493,151027017,151027531,151028776,151028987	Gene ID= ENSG00000211445.11 TPM= 84.03 Transcript Type= protein_coding
chr5	151029947	151081084	151029947	151081084	-	ENST00000389378.6@TNIP1	ENST00000389378.6	protein_coding	151080880,151064960,151063613,151062127,151060318,151056766,151052165,151049824,151045861,151042896,151042540,151039097,151036790,151035582,151035002,151033608,151032287,151029947	151081084,151065131,151063747,151062212,151060395,151056957,151052259,151049947,151045950,151042961,151042671,151039225,151036921,151035707,151035067,151033799,151032400,151030747	Gene ID= ENSG00000145901.14 TPM= 149.45 Transcript Type= protein_coding
chr5	151029945	151081016	151029945	151081016	-	ENST00000520931.5@TNIP1	ENST00000520931.5	protein_coding	151080880,151063613,151062127,151060318,151056766,151052165,151049824,151045861,151042896,151042540,151039097,151036790,151035582,151035002,151033608,151032287,151029945	151081016,151063747,151062212,151060395,151056957,151052259,151049947,151045950,151042961,151042671,151039225,151036921,151035707,151035067,151033799,151032383,151030747	Gene ID= ENSG00000145901.14 TPM= 29.19 Transcript Type= protein_coding
chr5	151091194	151157973	151091194	151157973	-	transcript4543.chr5.nnic@ANXA6	transcript4543.chr5.nnic	protein_coding	151157680,151147884,151140153,151139353,151138678,151137231,151136256,151134427,151133094,151132476,151131231,151129407,151128181,151126402,151124286,151122917,151122147,151119300,151117758,151117127,151110627,151109753,151108455,151105245,151103570,151101102,151091194	151157973,151147926,151140243,151139447,151138791,151137321,151136335,151134483,151133187,151132571,151131289,151129529,151128239,151126480,151124367,151123011,151122260,151119390,151117837,151117180,151110644,151109846,151108550,151105303,151103692,151101507,151091213	Gene ID= ENSG00000197043.13 TPM= 14.4 Transcript Type= NA
chr5	151101105	151157882	151101105	151157882	-	ENST00000354546.9@ANXA6	ENST00000354546.9	protein_coding	151157680,151147884,151140153,151139353,151138678,151137231,151136256,151134427,151133094,151132476,151131231,151129407,151128181,151126402,151124286,151122917,151122147,151119300,151117758,151117127,151110627,151109753,151108455,151105245,151103570,151101105	151157882,151147926,151140243,151139447,151138791,151137321,151136335,151134483,151133187,151132571,151131289,151129529,151128239,151126480,151124367,151123011,151122260,151119390,151117837,151117180,151110644,151109846,151108550,151105303,151103692,151101507	Gene ID= ENSG00000197043.13 TPM= 381.6 Transcript Type= protein_coding
chr5	151096919	151098552	151096919	151098552	-	transcript4552.chr5.nnic@NA	transcript4552.chr5.nnic	NA	151096919	151098552	Gene ID= novel_gene_chr5_4553 TPM= 2.34 Transcript Type= NA
chr5	151152258	151154981	151152258	151154981	+	transcript4550.chr5.nnic@NA	transcript4550.chr5.nnic	NA	151152258	151154981	Gene ID= novel_gene_chr5_4551 TPM= 2.34 Transcript Type= NA
chr5	151168312	151171196	151168312	151171196	+	transcript4562.chr5.nnic@NA	transcript4562.chr5.nnic	NA	151168312	151171196	Gene ID= novel_gene_chr5_4563 TPM= 7.01 Transcript Type= NA
chr5	151181052	151224093	151181052	151224093	-	ENST00000521308.5@CCDC69	ENST00000521308.5	protein_coding	151223923,151201582,151198997,151187386,151186023,151185422,151184344,151181052	151224093,151201688,151199084,151187459,151186124,151185541,151184441,151183614	Gene ID= ENSG00000198624.12 TPM= 10.89 Transcript Type= processed_transcript
chr5	151181052	151224145	151181052	151224145	-	ENST00000355417.6@CCDC69	ENST00000355417.6	protein_coding	151223923,151205400,151201582,151198997,151187386,151186023,151185422,151184344,151181052	151224145,151205475,151201688,151199084,151187459,151186124,151185541,151184441,151183614	Gene ID= ENSG00000198624.12 TPM= 165.02 Transcript Type= protein_coding
chr5	151252892	151270440	151252892	151270440	+	ENST00000357164.3@GM2A	ENST00000357164.3	protein_coding	151252892,151259755,151266731,151267296	151253297,151259916,151266913,151270440	Gene ID= ENSG00000196743.8 TPM= 46.7 Transcript Type= protein_coding
chr5	151253072	151272765	151253072	151272765	+	transcript4568.chr5.nnic@GM2A	transcript4568.chr5.nnic	protein_coding	151253072,151259755,151266731,151270150	151253297,151259916,151266913,151272765	Gene ID= ENSG00000196743.8 TPM= 4.67 Transcript Type= NA
chr5	151504093	151531972	151504093	151531972	-	ENST00000520200.5@FAT2	ENST00000520200.5	protein_coding	151531587,151529178,151527996,151527234,151525768,151521276,151517620,151512165,151510021,151507154,151504093	151531972,151529392,151528133,151527377,151525965,151522086,151517765,151512348,151510174,151507611,151506097	Gene ID= ENSG00000086570.12 TPM= 1.17 Transcript Type= protein_coding
chr5	151662436	151686933	151662436	151686933	-	transcript4589.chr5.nnic@SPARC	transcript4589.chr5.nnic	protein_coding	151686865,151676132,151674612,151673129,151671573,151669664,151667471,151664087,151662436	151686933,151676201,151674674,151673216,151671694,151669784,151667600,151664166,151663599	Gene ID= ENSG00000113140.10 TPM= 34.44 Transcript Type= NA
chr5	151724823	151728196	151724823	151728196	-	transcript4596.chr5.nnic@NA	transcript4596.chr5.nnic	NA	151724823	151728196	Gene ID= novel_gene_chr5_4597 TPM= 3.5 Transcript Type= NA
chr5	151729528	151758650	151729528	151758650	-	transcript4598.chr5.nnic@ATOX1	transcript4598.chr5.nnic	protein_coding	151758546,151751704,151746279,151729528	151758650,151751779,151746449,151730550	Gene ID= ENSG00000177556.11 TPM= 2.34 Transcript Type= NA
chr5	151742822	151772532	151742822	151772532	-	ENST00000524142.5@ATOX1	ENST00000524142.5	protein_coding	151772403,151758546,151751704,151746279,151742822	151772532,151758779,151751779,151746449,151742959	Gene ID= ENSG00000177556.11 TPM= 21.02 Transcript Type= protein_coding
chr5	151742823	151758649	151742823	151758649	-	ENST00000313115.10@ATOX1	ENST00000313115.10	protein_coding	151758546,151751704,151746279,151742823	151758649,151751779,151746449,151742959	Gene ID= ENSG00000177556.11 TPM= 11.68 Transcript Type= protein_coding
chr5	151765859	151766378	151765859	151766378	-	ENST00000518134.1@AC091982.1	ENST00000518134.1	transcribed_processed_pseudogene	151765859	151766378	Gene ID= ENSG00000213433.5 TPM= 1.17 Transcript Type= processed_transcript
chr5	151772104	151805349	151772104	151805349	+	transcript4612.chr5.nic@G3BP1	transcript4612.chr5.nic	protein_coding	151772104,151786572,151790323,151790889,151794159,151795479,151797227,151799212,151799889,151800218,151800760,151803885	151772668,151786715,151790404,151791062,151794249,151795575,151797428,151799313,151800000,151800346,151800869,151805349	Gene ID= ENSG00000145907.14 TPM= 12.26 Transcript Type= NA
chr5	151771943	151805350	151771943	151805350	+	ENST00000356245.7@G3BP1	ENST00000356245.7	protein_coding	151771943,151786572,151790323,151790889,151794159,151795479,151797227,151799212,151799889,151800218,151800760,151803885	151772036,151786715,151790404,151791062,151794249,151795575,151797428,151799313,151800000,151800346,151800869,151805350	Gene ID= ENSG00000145907.14 TPM= 171.05 Transcript Type= protein_coding
chr5	151771954	151774725	151771954	151774725	+	transcript4616.chr5.nnic@NA	transcript4616.chr5.nnic	NA	151771954	151774725	Gene ID= novel_gene_chr5_4617 TPM= 2.34 Transcript Type= NA
chr5	151804972	151811346	151804972	151811346	+	transcript4618.chr5.nnic@NA	transcript4618.chr5.nnic	NA	151804972	151811346	Gene ID= novel_gene_chr5_4619 TPM= 7.01 Transcript Type= NA
chr5	152391532	152405279	152391532	152405279	-	ENST00000255262.3@NMUR2	ENST00000255262.3	protein_coding	152404388,152398060,152395459,152391532	152405279,152398144,152395584,152392501	Gene ID= ENSG00000132911.4 TPM= 3.5 Transcript Type= protein_coding
chr5	153991765	154038913	153991765	154038913	-	transcript4631.chr5.nic@FAM114A2	transcript4631.chr5.nic	protein_coding	154038857,154038293,154034744,154034278,154033791,154029489,154028149,154027176,154026399,154011241,154002847,154002251,153997803,153994919,153991765	154038913,154038434,154034967,154034377,154033883,154029580,154028283,154027334,154026522,154011320,154002969,154002390,153997875,153994972,153993110	Gene ID= ENSG00000055147.18 TPM= 3.5 Transcript Type= NA
chr5	153990128	154038919	153990128	154038919	-	ENST00000351797.8@FAM114A2	ENST00000351797.8	protein_coding	154038857,154034744,154034278,154033791,154029489,154028149,154027176,154026399,154011241,154002847,154002251,153997803,153994919,153990128	154038919,154034967,154034377,154033883,154029580,154028283,154027334,154026522,154011320,154002969,154002390,153997875,153994972,153993110	Gene ID= ENSG00000055147.18 TPM= 1.17 Transcript Type= protein_coding
chr5	154029598	154031326	154029598	154031326	+	transcript4659.chr5.nnic@NA	transcript4659.chr5.nnic	NA	154029598	154031326	Gene ID= novel_gene_chr5_4660 TPM= 2.34 Transcript Type= NA
chr5	154038993	154055033	154038993	154055033	+	ENST00000322602.9@MFAP3	ENST00000322602.9	protein_coding	154038993,154049557,154052920	154039308,154050017,154055033	Gene ID= ENSG00000037749.11 TPM= 2.34 Transcript Type= protein_coding
chr5	154190730	154420984	154190730	154420984	+	ENST00000297107.10@GALNT10	ENST00000297107.10	protein_coding	154190730,154294816,154297941,154329572,154376277,154380448,154386313,154404104,154409541,154412889,154415783,154416814	154191025,154294918,154298079,154329738,154376462,154380631,154386430,154404211,154409762,154413005,154415932,154420984	Gene ID= ENSG00000164574.15 TPM= 27.44 Transcript Type= protein_coding
chr5	154287453	154420984	154287453	154420984	+	transcript4668.chr5.nic@GALNT10	transcript4668.chr5.nic	protein_coding	154287453,154294816,154297941,154329572,154376277,154380448,154386313,154404104,154409541,154412889,154415783,154416814	154287514,154294918,154298079,154329738,154376462,154380631,154386430,154404211,154409762,154413005,154415932,154420984	Gene ID= ENSG00000164574.15 TPM= 18.1 Transcript Type= NA
chr5	154445957	154461054	154445957	154461054	+	ENST00000297109.10@SAP30L	ENST00000297109.10	protein_coding	154445957,154451091,154453402,154455900	154446805,154451213,154453500,154461054	Gene ID= ENSG00000164576.11 TPM= 59.55 Transcript Type= protein_coding
chr5	154755295	154814915	154755295	154814915	+	transcript4683.chr5.nic@LARP1	transcript4683.chr5.nic	protein_coding	154755295,154790325,154790645,154792622,154793595,154793800,154794100,154795175,154799591,154799873,154802007,154803290,154803540,154804201,154805881,154808459,154811247,154811513,154813887	154756193,154790386,154790710,154792796,154793723,154794000,154794262,154795319,154799759,154800042,154802399,154803413,154803745,154804307,154806032,154808603,154811356,154811640,154814915	Gene ID= ENSG00000155506.16 TPM= 37.36 Transcript Type= NA
chr5	154791136	154794516	154791136	154794516	-	transcript4689.chr5.nnic@NA	transcript4689.chr5.nnic	NA	154791136	154794516	Gene ID= novel_gene_chr5_4690 TPM= 2.34 Transcript Type= NA
chr5	154815909	154817481	154815909	154817481	+	transcript4687.chr5.nnic@NA	transcript4687.chr5.nnic	NA	154815909	154817481	Gene ID= novel_gene_chr5_4688 TPM= 2.34 Transcript Type= NA
chr5	154818491	154850906	154818491	154850906	-	ENST00000326080.9@FAXDC2	ENST00000326080.9	protein_coding	154850483,154838131,154834843,154834625,154830801,154823387,154822472,154821260,154818491	154850906,154838178,154834934,154834728,154830922,154823592,154822577,154821426,154820472	Gene ID= ENSG00000170271.10 TPM= 37.65 Transcript Type= protein_coding
chr5	154818491	154835114	154818491	154835114	-	transcript4696.chr5.nic@FAXDC2	transcript4696.chr5.nic	protein_coding	154834843,154834625,154830801,154823387,154822472,154821260,154818491	154835114,154834728,154830922,154823592,154822577,154821426,154820472	Gene ID= ENSG00000170271.10 TPM= 35.32 Transcript Type= NA
chr5	154818491	154835097	154818491	154835097	-	transcript4699.chr5.nic@FAXDC2	transcript4699.chr5.nic	protein_coding	154834843,154830801,154823308,154822472,154821260,154818491	154835097,154830922,154823592,154822577,154821426,154820472	Gene ID= ENSG00000170271.10 TPM= 8.17 Transcript Type= NA
chr5	154818491	154835097	154818491	154835097	-	transcript4700.chr5.nic@FAXDC2	transcript4700.chr5.nic	protein_coding	154834843,154830801,154823387,154822472,154821260,154818491	154835097,154830922,154823592,154822577,154821426,154820472	Gene ID= ENSG00000170271.10 TPM= 22.48 Transcript Type= NA
chr5	154818491	154825081	154818491	154825081	-	transcript4702.chr5.nic@FAXDC2	transcript4702.chr5.nic	protein_coding	154823387,154822472,154821260,154818491	154825081,154822577,154821426,154820472	Gene ID= ENSG00000170271.10 TPM= 10.8 Transcript Type= NA
chr5	154828294	154831862	154828294	154831862	-	transcript4703.chr5.nnic@NA	transcript4703.chr5.nnic	NA	154828294	154831862	Gene ID= novel_gene_chr5_4704 TPM= 2.34 Transcript Type= NA
chr5	154858216	154876792	154858216	154876792	+	transcript4709.chr5.nic@CNOT8	transcript4709.chr5.nic	protein_coding	154858216,154858639,154863207,154865192,154870661,154871730,154872541,154875290	154858525,154858816,154863395,154865385,154870822,154871874,154872651,154876792	Gene ID= ENSG00000155508.13 TPM= 10.6 Transcript Type= NA
chr5	154858216	154876792	154858216	154876792	+	transcript4713.chr5.nic@CNOT8	transcript4713.chr5.nic	protein_coding	154858216,154858639,154863207,154865192,154871730,154872541,154875290	154858525,154858768,154863395,154865385,154871874,154872651,154876792	Gene ID= ENSG00000155508.13 TPM= 7.9 Transcript Type= NA
chr5	154858517	154876792	154858517	154876792	+	ENST00000403027.6@CNOT8	ENST00000403027.6	protein_coding	154858517,154863207,154865192,154870661,154871730,154872541,154875290	154858816,154863395,154865385,154870822,154871874,154872651,154876792	Gene ID= ENSG00000155508.13 TPM= 17.61 Transcript Type= protein_coding
chr5	154858252	154876792	154858252	154876792	+	ENST00000517876.5@CNOT8	ENST00000517876.5	protein_coding	154858252,154858639,154863207,154865192,154870661,154871730,154872541,154875290	154858525,154858768,154863395,154865385,154870822,154871874,154872651,154876792	Gene ID= ENSG00000155508.13 TPM= 41.73 Transcript Type= protein_coding
chr5	154858546	154876793	154858546	154876793	+	ENST00000285896.10@CNOT8	ENST00000285896.10	protein_coding	154858546,154863207,154865192,154870661,154871730,154872541,154875290	154858768,154863395,154865385,154870822,154871874,154872651,154876793	Gene ID= ENSG00000155508.13 TPM= 63.75 Transcript Type= protein_coding
chr5	154864400	154866520	154864400	154866520	-	transcript4733.chr5.nnic@NA	transcript4733.chr5.nnic	NA	154864400	154866520	Gene ID= novel_gene_chr5_4734 TPM= 2.34 Transcript Type= NA
chr5	154887416	154938209	154887416	154938209	-	ENST00000285873.7@GEMIN5	ENST00000285873.7	protein_coding	154937968,154937025,154935841,154932099,154931458,154928527,154927385,154925862,154924469,154921343,154919967,154917931,154916998,154912899,154911727,154907591,154905363,154904507,154903080,154902539,154901339,154899191,154898440,154896092,154892387,154891241,154889321,154887416	154938209,154937185,154936022,154932250,154931577,154928659,154927550,154926074,154924554,154921425,154920103,154918004,154917179,154913038,154911898,154907818,154905476,154904629,154903175,154902676,154901486,154899310,154898650,154896343,154892549,154891742,154889417,154888377	Gene ID= ENSG00000082516.8 TPM= 5.84 Transcript Type= protein_coding
chr5	154941070	154969411	154941070	154969411	+	ENST00000523037.5@MRPL22	ENST00000523037.5	protein_coding	154941070,154941217,154950821,154956371,154957135,154959980,154966686	154941138,154941265,154950938,154956436,154957212,154960049,154969411	Gene ID= ENSG00000082515.17 TPM= 31.53 Transcript Type= protein_coding
chr5	157080197	157080852	157080197	157080852	-	transcript4742.chr5.nnic@NA	transcript4742.chr5.nnic	NA	157080197	157080852	Gene ID= novel_gene_chr5_4743 TPM= 2.34 Transcript Type= NA
chr5	157085832	157109714	157085832	157109714	-	ENST00000307851.8@HAVCR2	ENST00000307851.8	protein_coding	157108926,157106627,157104666,157098858,157095306,157088941,157085832	157109714,157106962,157104749,157098901,157095459,157088977,157087294	Gene ID= ENSG00000135077.8 TPM= 60.71 Transcript Type= protein_coding
chr5	157137412	157143184	157137412	157143184	-	ENST00000286317.5@MED7	ENST00000286317.5	protein_coding	157142820,157137412	157143184,157139448	Gene ID= ENSG00000155868.7 TPM= 4.67 Transcript Type= protein_coding
chr5	157138442	157142775	157138442	157142775	-	ENST00000420343.1@MED7	ENST00000420343.1	protein_coding	157142401,157138442	157142775,157139448	Gene ID= ENSG00000155868.7 TPM= 3.5 Transcript Type= protein_coding
chr5	157180826	157255191	157180826	157255191	+	ENST00000422843.7@ITK	ENST00000422843.7	protein_coding	157180826,157208889,157211287,157214191,157217867,157222863,157228296,157232340,157238109,157240062,157241646,157243623,157244262,157245726,157245881,157248850,157252607	157181115,157208993,157211368,157214319,157217907,157223014,157228361,157232394,157238191,157240195,157241720,157243794,157244478,157245790,157245999,157249007,157255191	Gene ID= ENSG00000113263.12 TPM= 8.17 Transcript Type= protein_coding
chr5	157266081	157393224	157266081	157393224	+	ENST00000620254.4@CYFIP2	ENST00000620254.4	protein_coding	157266081,157285339,157287019,157294783,157296673,157300715,157302794,157304238,157307761,157309743,157311664,157314344,157314969,157319762,157320655,157323921,157325482,157326171,157327973,157330742,157333327,157339057,157341070,157359005,157360282,157361468,157382590,157383265,157389189,157390521,157392833	157266195,157285478,157287108,157294860,157296774,157300896,157302890,157304366,157307865,157309834,157311781,157314463,157315094,157319928,157320802,157324074,157325638,157326267,157328049,157330850,157333446,157339256,157341157,157359148,157360372,157361598,157382662,157383359,157389427,157390668,157393224	Gene ID= ENSG00000055163.19 TPM= 22.18 Transcript Type= protein_coding
chr5	157266298	157393224	157266298	157393224	+	transcript4757.chr5.nic@CYFIP2	transcript4757.chr5.nic	protein_coding	157266298,157285339,157287019,157294783,157296673,157300715,157302794,157304238,157307761,157309743,157311664,157314344,157314969,157319762,157320655,157323921,157325482,157326171,157327973,157330742,157333327,157339057,157341070,157359005,157360282,157361468,157382590,157383265,157389189,157390521,157392833	157266584,157285478,157287108,157294860,157296774,157300896,157302890,157304366,157307865,157309834,157311781,157314463,157315094,157319928,157320802,157324074,157325638,157326267,157328049,157330850,157333446,157339256,157341157,157359148,157360372,157361598,157382662,157383359,157389427,157390668,157393224	Gene ID= ENSG00000055163.19 TPM= 4.67 Transcript Type= NA
chr5	157269342	157393229	157269342	157393229	+	ENST00000618329.4@CYFIP2	ENST00000618329.4	protein_coding	157269342,157285339,157287019,157294783,157296673,157300715,157302794,157304238,157307761,157309743,157311664,157314344,157314969,157319762,157320655,157323921,157325482,157326171,157327973,157330742,157333327,157339057,157341070,157359005,157360282,157361468,157382590,157383265,157389189,157390521,157392833	157269583,157285478,157287108,157294860,157296774,157300896,157302890,157304366,157307865,157309834,157311781,157314463,157315094,157319928,157320802,157324074,157325638,157326267,157328049,157330850,157333446,157339256,157341157,157359148,157360372,157361598,157382662,157383359,157389427,157390668,157393229	Gene ID= ENSG00000055163.19 TPM= 4.67 Transcript Type= protein_coding
chr5	157477304	157575775	157477304	157575775	-	ENST00000257527.8@ADAM19	ENST00000257527.8	protein_coding	157575603,157570895,157564373,157537913,157530807,157519839,157518823,157513434,157509301,157507056,157505669,157502803,157499573,157496894,157494687,157492973,157491835,157491615,157490310,157489102,157488265,157481791,157477304	157575775,157570980,157564443,157537991,157530883,157520031,157518888,157513505,157509467,157507140,157505808,157502980,157499662,157497089,157494795,157493177,157491912,157491723,157490454,157489186,157488489,157481943,157481002	Gene ID= ENSG00000135074.15 TPM= 11.68 Transcript Type= protein_coding
chr5	157731197	157741448	157731197	157741448	+	ENST00000231198.11@THG1L	ENST00000231198.11	protein_coding	157731197,157732868,157734576,157735846,157737887,157739321	157731631,157733044,157734745,157735934,157737994,157741448	Gene ID= ENSG00000113272.13 TPM= 11.68 Transcript Type= protein_coding
chr5	157743695	157760709	157743695	157760709	+	ENST00000286307.5@LSM11	ENST00000286307.5	protein_coding	157743695,157751390,157754004,157754854	157744198,157751529,157754087,157760709	Gene ID= ENSG00000155858.5 TPM= 1.17 Transcript Type= protein_coding
chr5	157786291	157859190	157786291	157859190	-	transcript4777.chr5.nic@CLINT1	transcript4777.chr5.nic	protein_coding	157858930,157817443,157816734,157814185,157813063,157809628,157805866,157803650,157794898,157791703,157789363,157786291	157859190,157817547,157816830,157814293,157813227,157809805,157806112,157803719,157794972,157791995,157790651,157787992	Gene ID= ENSG00000113282.13 TPM= 8.37 Transcript Type= NA
chr5	157786289	157859175	157786289	157859175	-	ENST00000411809.6@CLINT1	ENST00000411809.6	protein_coding	157858930,157817443,157816734,157814185,157813063,157809628,157805866,157803650,157794898,157791703,157789363,157786289	157859175,157817547,157816830,157814293,157813227,157809805,157806112,157803719,157794972,157791995,157789513,157787992	Gene ID= ENSG00000113282.13 TPM= 146.15 Transcript Type= protein_coding
chr5	157786287	157859133	157786287	157859133	-	ENST00000530742.5@CLINT1	ENST00000530742.5	protein_coding	157859040,157817443,157816734,157814185,157813063,157809628,157805866,157803650,157794898,157791703,157789363,157786287	157859133,157817547,157816830,157814293,157813227,157809805,157806112,157803719,157794972,157791995,157789567,157787992	Gene ID= ENSG00000113282.13 TPM= 4.87 Transcript Type= protein_coding
chr5	159071577	159099949	159071577	159099949	-	transcript4794.chr5.nnic@EBF1	transcript4794.chr5.nnic	protein_coding	159099345,159096974,159096343,159095620,159084666,159071577	159099949,159097132,159096406,159095675,159084739,159073464	Gene ID= ENSG00000164330.16 TPM= 12.84 Transcript Type= NA
chr5	159157409	159209429	159157409	159209429	-	transcript4800.chr5.nnic@RNF145	transcript4800.chr5.nnic	protein_coding	159209231,159203434,159194716,159181960,159176632,159173983,159169679,159168873,159162926,159161266,159157409	159209429,159203656,159194826,159182051,159176867,159174158,159169819,159169055,159163079,159161609,159159035	Gene ID= ENSG00000145860.11 TPM= 18.1 Transcript Type= NA
chr5	159157409	159208891	159157409	159208891	-	transcript4804.chr5.nnic@RNF145	transcript4804.chr5.nnic	protein_coding	159208346,159203434,159194716,159181960,159176632,159173983,159169679,159168873,159162932,159161266,159157409	159208891,159203656,159194826,159182051,159176867,159174158,159169819,159169055,159163079,159161622,159159035	Gene ID= ENSG00000145860.11 TPM= 13.23 Transcript Type= NA
chr5	159157409	159209551	159157409	159209551	-	ENST00000424310.6@RNF145	ENST00000424310.6	protein_coding	159209231,159203434,159194716,159181960,159176632,159173983,159169679,159168873,159162932,159161266,159157409	159209551,159203656,159194824,159182051,159176867,159174158,159169819,159169055,159163079,159161622,159159035	Gene ID= ENSG00000145860.11 TPM= 23.74 Transcript Type= protein_coding
chr5	159157413	159209598	159157413	159209598	-	ENST00000611185.4@RNF145	ENST00000611185.4	protein_coding	159209543,159209231,159203434,159194716,159181960,159176632,159173983,159169679,159168873,159162932,159161266,159157413	159209598,159209510,159203656,159194824,159182051,159176867,159174158,159169819,159169055,159163079,159161622,159159035	Gene ID= ENSG00000145860.11 TPM= 10.89 Transcript Type= protein_coding
chr5	159188159	159191093	159188159	159191093	+	transcript4808.chr5.nnic@NA	transcript4808.chr5.nnic	NA	159188159	159191093	Gene ID= novel_gene_chr5_4809 TPM= 5.84 Transcript Type= NA
chr5	159263081	159286040	159263081	159286040	+	ENST00000296786.7@UBLCP1	ENST00000296786.7	protein_coding	159263081,159268870,159269908,159270360,159270528,159272023,159274585,159275148,159278238,159283212,159284904	159263360,159269069,159269999,159270445,159270643,159272121,159274622,159275246,159278354,159283339,159286040	Gene ID= ENSG00000164332.7 TPM= 38.53 Transcript Type= protein_coding
chr5	159865121	159888495	159865121	159888495	+	ENST00000641475.1@ADRA1B	ENST00000641475.1	protein_coding	159865121,159888045	159865206,159888495	Gene ID= ENSG00000170214.4 TPM= 1.17 Transcript Type= processed_transcript
chr5	159916447	159948833	159916447	159948833	+	transcript4818.chr5.nnic@ADRA1B	transcript4818.chr5.nnic	protein_coding	159916447,159925489,159947690	159917854,159925596,159948833	Gene ID= ENSG00000170214.4 TPM= 2.34 Transcript Type= NA
chr5	160075882	160119440	160075882	160119440	-	transcript4826.chr5.nic@PWWP2A	transcript4826.chr5.nic	protein_coding	160118805,160108545,160093101,160080651,160075882	160119440,160108614,160094065,160080770,160078168	Gene ID= ENSG00000170234.12 TPM= 2.72 Transcript Type= NA
chr5	160076441	160095077	160076441	160095077	-	transcript4835.chr5.nic@PWWP2A	transcript4835.chr5.nic	protein_coding	160093101,160076441	160095077,160078168	Gene ID= ENSG00000170234.12 TPM= 4.67 Transcript Type= NA
chr5	160075882	160119423	160075882	160119423	-	ENST00000456329.7@PWWP2A	ENST00000456329.7	protein_coding	160118805,160093101,160080651,160075882	160119423,160094065,160080770,160078168	Gene ID= ENSG00000170234.12 TPM= 9.73 Transcript Type= protein_coding
chr5	160091339	160119423	160091339	160119423	-	ENST00000307063.8@PWWP2A	ENST00000307063.8	protein_coding	160118805,160091339	160119423,160094065	Gene ID= ENSG00000170234.12 TPM= 7.39 Transcript Type= protein_coding
chr5	160277745	160312604	160277745	160312604	-	transcript4848.chr5.nic@CCNJL	transcript4848.chr5.nic	protein_coding	160312364,160311858,160277745	160312604,160311972,160280738	Gene ID= ENSG00000135083.14 TPM= 2.34 Transcript Type= NA
chr5	160393148	160400097	160393148	160400097	-	ENST00000408953.3@ZBED8	ENST00000408953.3	protein_coding	160399639,160393148	160400097,160395539	Gene ID= ENSG00000221886.3 TPM= 4.67 Transcript Type= protein_coding
chr5	160403153	160419076	160403153	160419076	-	transcript4855.chr5.nnic@SLU7	transcript4855.chr5.nnic	protein_coding	160418596,160417112,160415125,160414319,160413899,160413456,160412451,160408650,160408329,160407971,160407746,160407476,160406468,160405031,160404809,160404440,160403153	160419076,160417241,160415310,160414472,160413979,160413620,160412519,160408697,160408460,160408068,160407813,160407615,160406629,160405135,160404880,160404556,160403464	Gene ID= ENSG00000164609.9 TPM= 2.34 Transcript Type= NA
chr5	160401641	160419394	160401641	160419394	-	ENST00000297151.8@SLU7	ENST00000297151.8	protein_coding	160419023,160415125,160414319,160413899,160413456,160412451,160408650,160408329,160407971,160407746,160407476,160406468,160405031,160404809,160404440,160401641	160419394,160415310,160414472,160413979,160413620,160412519,160408697,160408460,160408068,160407813,160407615,160406629,160405135,160404880,160404556,160403464	Gene ID= ENSG00000164609.9 TPM= 16.35 Transcript Type= protein_coding
chr5	160421822	160428744	160421822	160428744	+	ENST00000352433.9@PTTG1	ENST00000352433.9	protein_coding	160421822,160422302,160422709,160424237,160427715,160428602	160421891,160422403,160422893,160424330,160427873,160428744	Gene ID= ENSG00000164611.12 TPM= 2.34 Transcript Type= protein_coding
chr5	160522810	160524701	160522810	160524701	-	transcript4865.chr5.nnic@NA	transcript4865.chr5.nnic	NA	160522810	160524701	Gene ID= novel_gene_chr5_4866 TPM= 2.34 Transcript Type= NA
chr5	160931781	160938626	160931781	160938626	-	ENST00000518301.1@LINC02159	ENST00000518301.1	lincRNA	160938454,160935990,160931781	160938626,160936109,160933633	Gene ID= ENSG00000253417.5 TPM= 1.17 Transcript Type= lincRNA
chr5	163437540	163445016	163437540	163445016	+	transcript4876.chr5.nnic@CCNG1	transcript4876.chr5.nnic	protein_coding	163437540,163437765,163439257,163441078,163441886,163442045,163442374,163443674	163437668,163437804,163439520,163441331,163441964,163442143,163442568,163445016	Gene ID= ENSG00000113328.18 TPM= 73.17 Transcript Type= NA
chr5	163437559	163445016	163437559	163445016	+	transcript4877.chr5.nic@CCNG1	transcript4877.chr5.nic	protein_coding	163437559,163439257,163441078,163441886,163442045,163442374,163443674,163444337	163437804,163439520,163441331,163441964,163442143,163442568,163443925,163445016	Gene ID= ENSG00000113328.18 TPM= 7.39 Transcript Type= NA
chr5	163437571	163445014	163437571	163445014	+	ENST00000393929.5@CCNG1	ENST00000393929.5	protein_coding	163437571,163437765,163439257,163441078,163441886,163442045,163442374,163443674	163437664,163437804,163439520,163441331,163441964,163442143,163442568,163445014	Gene ID= ENSG00000113328.18 TPM= 1.95 Transcript Type= protein_coding
chr5	163437581	163445016	163437581	163445016	+	ENST00000340828.6@CCNG1	ENST00000340828.6	protein_coding	163437581,163439257,163441078,163441886,163442045,163442374,163443674	163437804,163439520,163441331,163441964,163442143,163442568,163445016	Gene ID= ENSG00000113328.18 TPM= 147.12 Transcript Type= protein_coding
chr5	163453576	163460123	163453576	163460123	-	transcript4887.chr5.nic@NUDCD2	transcript4887.chr5.nic	protein_coding	163458995,163457562,163456929,163453576	163460123,163457610,163457080,163454050	Gene ID= ENSG00000170584.10 TPM= 5.84 Transcript Type= NA
chr5	163453576	163460145	163453576	163460145	-	transcript4892.chr5.nic@NUDCD2	transcript4892.chr5.nic	protein_coding	163457562,163456929,163453576	163460145,163457080,163454050	Gene ID= ENSG00000170584.10 TPM= 2.34 Transcript Type= NA
chr5	163460550	163491945	163460550	163491945	+	ENST00000393915.8@HMMR	ENST00000393915.8	protein_coding	163460550,163463856,163464723,163467701,163469641,163471185,163471363,163473179,163473379,163474057,163475458,163478684,163482642,163483020,163483268,163484069,163490390,163491112	163460738,163463954,163464802,163467748,163469829,163471271,163471463,163473253,163473557,163474205,163475672,163478800,163482788,163483172,163483367,163484245,163490552,163491945	Gene ID= ENSG00000072571.19 TPM= 1.17 Transcript Type= protein_coding
chr5	163503114	163519336	163503114	163519336	+	ENST00000280969.9@MAT2B	ENST00000280969.9	protein_coding	163503114,163512002,163513555,163513842,163516518,163517561,163518193	163503424,163512196,163513669,163513994,163516711,163517674,163519336	Gene ID= ENSG00000038274.16 TPM= 9.34 Transcript Type= protein_coding
chr5	163505548	163519322	163505548	163519322	+	ENST00000321757.10@MAT2B	ENST00000321757.10	protein_coding	163505548,163512002,163513555,163513842,163516518,163517561,163518193	163505749,163512196,163513669,163513994,163516711,163517674,163519322	Gene ID= ENSG00000038274.16 TPM= 71.22 Transcript Type= protein_coding
chr5	163505626	163519149	163505626	163519149	+	ENST00000523606.1@MAT2B	ENST00000523606.1	protein_coding	163505626,163512002,163513842,163516518,163517561,163518193	163505749,163513669,163513994,163516711,163517674,163519149	Gene ID= ENSG00000038274.16 TPM= 4.67 Transcript Type= retained_intron
chr5	168291645	168469756	168291645	168469756	+	transcript4919.chr5.nic@WWC1	transcript4919.chr5.nic	protein_coding	168291645,168371424,168385211,168397724,168399488,168406198,168408507,168409922,168414348,168422008,168423533,168428033,168428707,168430137,168431252,168441682,168444494,168453968,168455356,168460650,168464711,168467843,168468951	168292271,168371533,168385414,168397800,168399567,168406327,168408653,168409995,168414590,168422097,168424068,168428141,168428787,168430223,168431444,168441834,168444585,168454100,168455520,168460742,168464962,168467964,168469756	Gene ID= ENSG00000113645.14 TPM= 22.48 Transcript Type= NA
chr5	168291651	168472303	168291651	168472303	+	ENST00000265293.8@WWC1	ENST00000265293.8	protein_coding	168291651,168371424,168385211,168397724,168399488,168406198,168408507,168409922,168414348,168422008,168423533,168428033,168428707,168430137,168431252,168441682,168444494,168453968,168455356,168460650,168464729,168467840,168468951	168292271,168371533,168385414,168397800,168399567,168406327,168408653,168409995,168414590,168422097,168424068,168428141,168428787,168430223,168431444,168441834,168444585,168454100,168455520,168460742,168464962,168467964,168472303	Gene ID= ENSG00000113645.14 TPM= 5.84 Transcript Type= protein_coding
chr5	168486445	168519299	168486445	168519299	+	ENST00000231572.7@RARS	ENST00000231572.7	protein_coding	168486445,168488602,168492659,168493894,168494550,168495315,168497228,168500591,168502001,168506021,168506722,168510581,168516778,168517815,168519081	168486543,168488736,168492847,168494002,168494650,168495436,168497348,168500720,168502105,168506199,168506831,168510686,168516950,168518062,168519299	Gene ID= ENSG00000113643.8 TPM= 50.21 Transcript Type= protein_coding
chr5	168548495	168579600	168548495	168579600	-	ENST00000239231.6@PANK3	ENST00000239231.6	protein_coding	168579256,168568646,168566013,168563889,168561393,168559032,168548495	168579600,168568998,168566266,168564065,168561516,168559157,168557621	Gene ID= ENSG00000120137.6 TPM= 16.35 Transcript Type= protein_coding
chr5	168661740	169301129	168661740	169301129	-	ENST00000519560.5@SLIT3	ENST00000519560.5	protein_coding	169300513,169251388,169244705,169193479,168883265,168844584,168823260,168817300,168806446,168795507,168789560,168785907,168774235,168772781,168762539,168760862,168753864,168752955,168749472,168748302,168724416,168722933,168722256,168712283,168710895,168707976,168700582,168696292,168692607,168686979,168685687,168683966,168673177,168671198,168669783,168661740	169301129,169251459,169244776,169193550,168883336,168844655,168823331,168817463,168806587,168795578,168789631,168785978,168774378,168772944,168762689,168760936,168754007,168753098,168749635,168748434,168724484,168723004,168722327,168712354,168711058,168708100,168700679,168696431,168692700,168687116,168685927,168684096,168673331,168671483,168669991,168666689	Gene ID= ENSG00000184347.14 TPM= 23.35 Transcript Type= protein_coding
chr5	169583634	169604778	169583634	169604778	+	ENST00000265295.8@SPDL1	ENST00000265295.8	protein_coding	169583634,169588394,169591048,169593354,169594145,169594394,169594571,169596561,169598476,169598972,169601280,169604060	169583889,169588575,169591224,169593548,169594294,169594492,169594681,169596701,169598579,169599159,169601625,169604778	Gene ID= ENSG00000040275.16 TPM= 9.34 Transcript Type= protein_coding
chr5	169637224	170083379	169637224	170083379	+	transcript4956.chr5.nnic@DOCK2	transcript4956.chr5.nnic	protein_coding	169637224,169654403,169669288,169670110,169670542,169671078,169674297,169681744,169684196,169689252,169695803,169698374,169699382,169700014,169702303,169708169,169711935,169712120,169714028,169714360,169716213,169717384,169718657,169747396,169759705,169761519,169803058,169840757,169983068,169985828,169996086,170008497,170008688,170018960,170027863,170034399,170036515,170041055,170042013,170045816,170047510,170050256,170055305,170056684,170057580,170067510,170069137,170075947,170077710,170078975,170080163,170081842,170082796	169637369,169654486,169669328,169670193,169670597,169671174,169674445,169681879,169684350,169689333,169695938,169698449,169699458,169700139,169702427,169708267,169712007,169712223,169714211,169714457,169716302,169717484,169718791,169747504,169759775,169761625,169803206,169840852,169983166,169985922,169996164,170008597,170008746,170019108,170027948,170034555,170036555,170041145,170042132,170045905,170047614,170050397,170055386,170056768,170057666,170067686,170069220,170076084,170077837,170079146,170080283,170081984,170083379	Gene ID= ENSG00000134516.15 TPM= 10.51 Transcript Type= NA
chr5	169637224	169934871	169637224	169934871	+	transcript4961.chr5.nic@DOCK2	transcript4961.chr5.nic	protein_coding	169637224,169654403,169669288,169670542,169671078,169674297,169681744,169684196,169689252,169695803,169698374,169699382,169700014,169702303,169708169,169711935,169712120,169714028,169714360,169716213,169717384,169718657,169747396,169759705,169761519,169803058,169840757,169934652	169637369,169654486,169669328,169670597,169671174,169674445,169681879,169684350,169689333,169695938,169698449,169699458,169700139,169702427,169708267,169712007,169712223,169714211,169714457,169716302,169717484,169718791,169747504,169759775,169761625,169803206,169840852,169934871	Gene ID= ENSG00000134516.15 TPM= 3.5 Transcript Type= NA
chr5	169637247	170083382	169637247	170083382	+	ENST00000256935.12@DOCK2	ENST00000256935.12	protein_coding	169637247,169654403,169669288,169670542,169671078,169674297,169681744,169684196,169689252,169695803,169698374,169699382,169700014,169702303,169708169,169711935,169712120,169714028,169714360,169716213,169717384,169718657,169747396,169759705,169761519,169803058,169840757,169983068,169985828,169996086,170008497,170008688,170018960,170027863,170034399,170036515,170041055,170042013,170045816,170047510,170050256,170055305,170056684,170057580,170067510,170069137,170075947,170077710,170078975,170080163,170081842,170082796	169637369,169654486,169669328,169670597,169671174,169674445,169681879,169684350,169689333,169695938,169698449,169699458,169700139,169702427,169708267,169712007,169712223,169714211,169714457,169716302,169717484,169718791,169747504,169759775,169761625,169803206,169840852,169983166,169985922,169996164,170008597,170008746,170019108,170027948,170034555,170036555,170041145,170042132,170045905,170047614,170050397,170055386,170056768,170057666,170067686,170069220,170076084,170077837,170079146,170080283,170081984,170083382	Gene ID= ENSG00000134516.15 TPM= 33.86 Transcript Type= protein_coding
chr5	170246237	170298227	170246237	170298227	-	ENST00000046794.9@LCP2	ENST00000046794.9	protein_coding	170297534,170293310,170287970,170275795,170275320,170274301,170270719,170268385,170267009,170266808,170262967,170262842,170262635,170261107,170258866,170258037,170256526,170253119,170252434,170250730,170246237	170298227,170293372,170288016,170275860,170275351,170274338,170270917,170268482,170267075,170266891,170262992,170262861,170262742,170261137,170258878,170258166,170256575,170253213,170252511,170250885,170248819	Gene ID= ENSG00000043462.11 TPM= 7.01 Transcript Type= protein_coding
chr5	170248085	170297818	170248085	170297818	-	ENST00000628092.2@LCP2	ENST00000628092.2	protein_coding	170297534,170293310,170287970,170275795,170275320,170274301,170270719,170268385,170267009,170266808,170262967,170262842,170262635,170261094,170258037,170256526,170253119,170252434,170250730,170248085	170297818,170293372,170288016,170275860,170275351,170274338,170270917,170268482,170267075,170266891,170262992,170262861,170262742,170261137,170258166,170256575,170253213,170252511,170250885,170248819	Gene ID= ENSG00000043462.11 TPM= 2.34 Transcript Type= protein_coding
chr5	170283928	170284819	170283928	170284819	+	transcript4976.chr5.nnic@NA	transcript4976.chr5.nnic	NA	170283928	170284819	Gene ID= novel_gene_chr5_4977 TPM= 2.34 Transcript Type= NA
chr5	170353512	170357144	170353512	170357144	+	transcript4978.chr5.nnic@NA	transcript4978.chr5.nnic	NA	170353512	170357144	Gene ID= novel_gene_chr5_4979 TPM= 2.34 Transcript Type= NA
chr5	170374671	170389677	170374671	170389677	-	ENST00000274629.8@KCNMB1	ENST00000274629.8	protein_coding	170389259,170385314,170383679,170374671	170389677,170385471,170383850,170378973	Gene ID= ENSG00000145936.8 TPM= 1.17 Transcript Type= protein_coding
chr5	170718756	170736630	170718756	170736630	+	transcript4983.chr5.nic@KCNIP1	transcript4983.chr5.nic	protein_coding	170718756,170720321,170721833,170722713,170732800,170733836,170735759	170718882,170720390,170721903,170722820,170732904,170733898,170736630	Gene ID= ENSG00000182132.13 TPM= 2.34 Transcript Type= NA
chr5	171387648	171411137	171387648	171411137	+	ENST00000296930.9@NPM1	ENST00000296930.9	protein_coding	171387648,171390051,171391305,171391706,171392710,171392914,171400153,171400839,171405302,171407700,171410527	171388006,171390130,171391424,171391799,171392816,171392978,171400210,171400925,171405403,171407774,171411137	Gene ID= ENSG00000181163.13 TPM= 476.96 Transcript Type= protein_coding
chr5	171387829	171410884	171387829	171410884	+	ENST00000351986.10@NPM1	ENST00000351986.10	protein_coding	171387829,171390051,171391305,171391706,171392710,171392914,171400153,171405302,171407700,171410527	171388006,171390130,171391424,171391799,171392816,171392978,171400210,171405403,171407774,171410884	Gene ID= ENSG00000181163.13 TPM= 18.1 Transcript Type= protein_coding
chr5	171419656	171457623	171419656	171457623	+	ENST00000274625.5@FGF18	ENST00000274625.5	protein_coding	171419656,171420407,171436093,171449147,171456539	171420231,171420443,171436273,171449253,171457623	Gene ID= ENSG00000156427.7 TPM= 8.17 Transcript Type= protein_coding
chr5	171861549	172006873	171861549	172006873	-	ENST00000296933.10@FBXW11	ENST00000296933.10	protein_coding	172006458,171914343,171910572,171899914,171899004,171891467,171878011,171876285,171872872,171870748,171869729,171868610,171861549	172006873,171914405,171910797,171900100,171899094,171891604,171878129,171876534,171872990,171870858,171869807,171868796,171864101	Gene ID= ENSG00000072803.17 TPM= 10.51 Transcript Type= protein_coding
chr5	171861693	172006650	171861693	172006650	-	transcript5013.chr5.nic@FBXW11	transcript5013.chr5.nic	protein_coding	172006458,171996890,171910572,171899914,171899004,171891467,171878011,171876285,171872872,171870748,171869729,171868610,171861693	172006650,171997051,171910797,171900100,171899094,171891604,171878129,171876534,171872990,171870858,171869807,171868796,171864101	Gene ID= ENSG00000072803.17 TPM= 4.67 Transcript Type= NA
chr5	171863441	171867503	171863441	171867503	+	transcript5021.chr5.nnic@NA	transcript5021.chr5.nnic	NA	171863441	171867503	Gene ID= novel_gene_chr5_5022 TPM= 3.5 Transcript Type= NA
chr5	172004490	172006634	172004490	172006634	-	transcript5023.chr5.nnic@NA	transcript5023.chr5.nnic	NA	172004490	172006634	Gene ID= novel_gene_chr5_5024 TPM= 2.34 Transcript Type= NA
chr5	172042073	172188386	172042073	172188386	-	ENST00000176763.9@STK10	ENST00000176763.9	protein_coding	172187887,172156624,172127373,172117481,172107780,172106620,172105656,172096426,172093412,172090232,172082961,172082326,172064720,172061139,172057349,172055588,172054569,172052929,172042073	172188386,172156788,172127421,172117630,172107852,172106814,172105737,172096560,172093960,172090362,172083084,172082505,172064812,172061268,172057473,172055776,172054694,172053042,172045022	Gene ID= ENSG00000072786.12 TPM= 11.68 Transcript Type= protein_coding
chr5	172101683	172106416	172101683	172106416	+	transcript5038.chr5.nnic@NA	transcript5038.chr5.nnic	NA	172101683	172106416	Gene ID= novel_gene_chr5_5039 TPM= 9.34 Transcript Type= NA
chr5	172133058	172134757	172133058	172134757	+	transcript5040.chr5.nnic@NA	transcript5040.chr5.nnic	NA	172133058	172134757	Gene ID= novel_gene_chr5_5041 TPM= 3.5 Transcript Type= NA
chr5	172209640	172284071	172209640	172284071	-	ENST00000393792.2@UBTD2	ENST00000393792.2	protein_coding	172283596,172234122,172209640	172284071,172234358,172212227	Gene ID= ENSG00000168246.5 TPM= 38.53 Transcript Type= protein_coding
chr5	172333499	172454523	172333499	172454523	-	ENST00000311601.5@SH3PXD2B	ENST00000311601.5	protein_coding	172454278,172422416,172406277,172394563,172382036,172373790,172362735,172358773,172353888,172350363,172347283,172346136,172333499	172454523,172422496,172406352,172394639,172382127,172373815,172362869,172358877,172354005,172350589,172347332,172346261,172339916	Gene ID= ENSG00000174705.12 TPM= 36.2 Transcript Type= protein_coding
chr5	172349575	172357141	172349575	172357141	-	transcript5057.chr5.nic@SH3PXD2B	transcript5057.chr5.nic	protein_coding	172353888,172349575	172357141,172350589	Gene ID= ENSG00000174705.12 TPM= 7.01 Transcript Type= NA
chr5	172416697	172454518	172416697	172454518	-	transcript5059.chr5.nic@SH3PXD2B	transcript5059.chr5.nic	protein_coding	172454278,172416697	172454518,172422496	Gene ID= ENSG00000174705.12 TPM= 2.34 Transcript Type= NA
chr5	172641252	172673831	172641252	172673831	+	transcript5060.chr5.nic@NEURL1B	transcript5060.chr5.nic	protein_coding	172641252,172669785	172641437,172673831	Gene ID= ENSG00000214357.8 TPM= 2.34 Transcript Type= NA
chr5	172641266	172691540	172641266	172691540	+	ENST00000369800.5@NEURL1B	ENST00000369800.5	protein_coding	172641266,172669785,172683419,172686171,172686681	172641437,172670330,172684138,172686296,172691540	Gene ID= ENSG00000214357.8 TPM= 38.53 Transcript Type= protein_coding
chr5	172768090	172771257	172768090	172771257	-	transcript5077.chr5.nic@DUSP1	transcript5077.chr5.nic	protein_coding	172770586,172769575,172768090	172771257,172770306,172769132	Gene ID= ENSG00000120129.5 TPM= 24.23 Transcript Type= NA
chr5	172768090	172771195	172768090	172771195	-	ENST00000239223.3@DUSP1	ENST00000239223.3	protein_coding	172770586,172770161,172769575,172768090	172771195,172770306,172769794,172769132	Gene ID= ENSG00000120129.5 TPM= 864.02 Transcript Type= protein_coding
chr5	172834220	172952683	172834220	172952683	+	transcript5087.chr5.nnic@ERGIC1	transcript5087.chr5.nnic	protein_coding	172834220,172888699,172897002,172909667,172914714,172924005,172926509,172932436,172935188,172950709,172952481	172834433,172888760,172897074,172909761,172914838,172924109,172926569,172932536,172935310,172952298,172952683	Gene ID= ENSG00000113719.15 TPM= 12.26 Transcript Type= NA
chr5	172834275	172952685	172834275	172952685	+	ENST00000393784.7@ERGIC1	ENST00000393784.7	protein_coding	172834275,172888699,172897002,172909667,172914714,172924005,172926509,172932436,172935188,172950709	172834433,172888760,172897074,172909761,172914838,172924109,172926569,172932536,172935310,172952685	Gene ID= ENSG00000113719.15 TPM= 42.62 Transcript Type= protein_coding
chr5	172889232	172893016	172889232	172893016	-	transcript5109.chr5.nnic@NA	transcript5109.chr5.nnic	NA	172889232	172893016	Gene ID= novel_gene_chr5_5110 TPM= 2.34 Transcript Type= NA
chr5	172925186	172927823	172925186	172927823	-	transcript5105.chr5.nnic@NA	transcript5105.chr5.nnic	NA	172925186	172927823	Gene ID= novel_gene_chr5_5106 TPM= 4.67 Transcript Type= NA
chr5	172927581	172928926	172927581	172928926	-	transcript5107.chr5.nnic@NA	transcript5107.chr5.nnic	NA	172927581	172928926	Gene ID= novel_gene_chr5_5108 TPM= 3.5 Transcript Type= NA
chr5	172952447	172953433	172952447	172953433	+	transcript5103.chr5.nnic@NA	transcript5103.chr5.nnic	NA	172952447	172953433	Gene ID= novel_gene_chr5_5104 TPM= 2.34 Transcript Type= NA
chr5	172959424	172969771	172959424	172969771	+	ENST00000265100.6@RPL26L1	ENST00000265100.6	protein_coding	172959424,172959865,172968459,172969413	172959468,172960041,172968599,172969771	Gene ID= ENSG00000037241.7 TPM= 9.92 Transcript Type= protein_coding
chr5	172958893	172969721	172958893	172969721	+	ENST00000521476.5@RPL26L1	ENST00000521476.5	protein_coding	172958893,172959865,172968459,172969413	172959007,172960041,172968599,172969721	Gene ID= ENSG00000037241.7 TPM= 2.92 Transcript Type= protein_coding
chr5	172983757	173035445	172983757	173035445	+	ENST00000519374.5@ATP6V0E1	ENST00000519374.5	protein_coding	172983757,172994775,173020238,173034399	172983964,172994822,173020367,173035445	Gene ID= ENSG00000113732.8 TPM= 4.67 Transcript Type= protein_coding
chr5	173056368	173091536	173056368	173091536	+	ENST00000520420.5@CREBRF	ENST00000520420.5	protein_coding	173056368,173080585,173086501,173090315	173056479,173080784,173086626,173091536	Gene ID= ENSG00000164463.12 TPM= 1.17 Transcript Type= protein_coding
chr5	173144515	173164387	173144515	173164387	+	ENST00000351486.9@BNIP1	ENST00000351486.9	protein_coding	173144515,173146866,173154322,173158744,173159933,173163725	173144629,173146958,173154413,173158845,173160051,173164387	Gene ID= ENSG00000113734.17 TPM= 10.51 Transcript Type= protein_coding
chr5	173314713	173329503	173314713	173329503	-	ENST00000265087.8@STC2	ENST00000265087.8	protein_coding	173328043,173325868,173323219,173314713	173329503,173326010,173323430,173318249	Gene ID= ENSG00000113739.10 TPM= 5.84 Transcript Type= protein_coding
chr5	173607514	173616679	173607514	173616679	-	transcript5122.chr5.nnic@BOD1	transcript5122.chr5.nnic	protein_coding	173616200,173613131,173609578,173609238,173607514	173616679,173613255,173609670,173609434,173608292	Gene ID= ENSG00000145919.10 TPM= 2.34 Transcript Type= NA
chr5	173581542	173616674	173581542	173616674	-	transcript5124.chr5.nnic@BOD1	transcript5124.chr5.nnic	protein_coding	173616200,173585513,173581542	173616674,173585588,173584386	Gene ID= ENSG00000145919.10 TPM= 2.34 Transcript Type= NA
chr5	173607514	173616660	173607514	173616660	-	ENST00000311086.8@BOD1	ENST00000311086.8	protein_coding	173616200,173613131,173609238,173607514	173616660,173613255,173609434,173608292	Gene ID= ENSG00000145919.10 TPM= 29.19 Transcript Type= protein_coding
chr5	173607538	173612802	173607538	173612802	-	transcript5128.chr5.nnic@NA	transcript5128.chr5.nnic	NA	173607538	173612802	Gene ID= novel_gene_chr5_5129 TPM= 2.34 Transcript Type= NA
chr5	173888280	173961976	173888280	173961976	+	ENST00000265085.9@CPEB4	ENST00000265085.9	protein_coding	173888280,173910523,173932450,173943026,173944967,173949508,173949960,173951824,173953091,173955910	173890858,173910604,173932500,173943049,173945140,173949597,173950078,173951938,173953272,173961976	Gene ID= ENSG00000113742.12 TPM= 19.85 Transcript Type= protein_coding
chr5	173939755	173941003	173939755	173941003	-	transcript5147.chr5.nnic@NA	transcript5147.chr5.nnic	NA	173939755	173941003	Gene ID= novel_gene_chr5_5148 TPM= 2.34 Transcript Type= NA
chr5	175440039	175444208	175440039	175444208	-	ENST00000393752.2@DRD1	ENST00000393752.2	protein_coding	175443699,175440039	175444208,175443582	Gene ID= ENSG00000184845.3 TPM= 1.17 Transcript Type= protein_coding
chr5	175478395	175529742	175478395	175529742	+	ENST00000321442.9@SFXN1	ENST00000321442.9	protein_coding	175478395,175492095,175509032,175510109,175511451,175512111,175513463,175516614,175521919,175522375,175526638	175478639,175492267,175509202,175510207,175511526,175512196,175513590,175516663,175521968,175522422,175529742	Gene ID= ENSG00000164466.12 TPM= 5.84 Transcript Type= protein_coding
chr5	175658030	175686242	175658030	175686242	+	ENST00000377291.2@HRH2	ENST00000377291.2	protein_coding	175658030,175682709,175685409	175658155,175684309,175686242	Gene ID= ENSG00000113749.7 TPM= 3.5 Transcript Type= protein_coding
chr5	175959527	175968299	175959527	175968299	-	ENST00000265097.8@THOC3	ENST00000265097.8	protein_coding	175967942,175967111,175964951,175961273,175961051,175959527	175968299,175967267,175965155,175961434,175961151,175960132	Gene ID= ENSG00000051596.9 TPM= 51.37 Transcript Type= protein_coding
chr5	176346061	176361968	176346061	176361968	-	ENST00000298569.8@KIAA1191	ENST00000298569.8	protein_coding	176361602,176359811,176359481,176355571,176352622,176350613,176348250,176347921,176346061	176361968,176359918,176359567,176355749,176352748,176350737,176348356,176348063,176347808	Gene ID= ENSG00000122203.14 TPM= 124.87 Transcript Type= protein_coding
chr5	176346062	176361828	176346062	176361828	-	transcript5185.chr5.nnic@KIAA1191	transcript5185.chr5.nnic	protein_coding	176361602,176359811,176359481,176350613,176348250,176347921,176346062	176361828,176359918,176359567,176350737,176348356,176348063,176347808	Gene ID= ENSG00000122203.14 TPM= 7.53 Transcript Type= NA
chr5	176346065	176361807	176346065	176361807	-	ENST00000620366.4@KIAA1191	ENST00000620366.4	protein_coding	176361602,176352622,176350613,176348250,176347921,176346065	176361807,176352748,176350737,176348356,176348063,176347808	Gene ID= ENSG00000122203.14 TPM= 3.84 Transcript Type= protein_coding
chr5	176346062	176361828	176346062	176361828	-	transcript5191.chr5.nic@KIAA1191	transcript5191.chr5.nic	protein_coding	176361602,176359811,176359481,176348250,176347921,176346062	176361828,176359918,176359567,176348356,176348063,176347808	Gene ID= ENSG00000122203.14 TPM= 9.87 Transcript Type= NA
chr5	176346062	176361765	176346062	176361765	-	ENST00000393725.6@KIAA1191	ENST00000393725.6	protein_coding	176361602,176359811,176355571,176352622,176350613,176348250,176347921,176346062	176361765,176359918,176355749,176352748,176350737,176348356,176348063,176347808	Gene ID= ENSG00000122203.14 TPM= 17.46 Transcript Type= protein_coding
chr5	176346062	176361739	176346062	176361739	-	ENST00000393728.6@KIAA1191	ENST00000393728.6	protein_coding	176361602,176359811,176348250,176347921,176346062	176361739,176359918,176348356,176348063,176347808	Gene ID= ENSG00000122203.14 TPM= 4.03 Transcript Type= processed_transcript
chr5	176383946	176388762	176383946	176388762	-	ENST00000621444.4@NOP16	ENST00000621444.4	protein_coding	176388433,176388235,176386840,176385221,176383946	176388762,176388343,176386909,176385327,176384283	Gene ID= ENSG00000048162.20 TPM= 4.09 Transcript Type= protein_coding
chr5	176383946	176388597	176383946	176388597	-	transcript5197.chr5.nnic@NOP16	transcript5197.chr5.nnic	protein_coding	176388235,176386840,176385930,176385221,176383946	176388597,176386909,176386019,176385327,176384374	Gene ID= ENSG00000048162.20 TPM= 2.92 Transcript Type= NA
chr5	176383946	176388975	176383946	176388975	-	ENST00000614830.4@NOP16	ENST00000614830.4	protein_coding	176388433,176388235,176386840,176385221,176383946	176388975,176388343,176386909,176385327,176384374	Gene ID= ENSG00000048162.20 TPM= 12.84 Transcript Type= protein_coding
chr5	176388402	176389759	176388402	176389759	+	transcript5207.chr5.nnic@NA	transcript5207.chr5.nnic	NA	176388402	176389759	Gene ID= novel_gene_chr5_5208 TPM= 5.84 Transcript Type= NA
chr5	176388747	176389771	176388747	176389771	+	ENST00000274787.2@HIGD2A	ENST00000274787.2	protein_coding	176388747,176389331	176388973,176389771	Gene ID= ENSG00000146066.2 TPM= 72.39 Transcript Type= protein_coding
chr5	176392455	176416569	176392455	176416569	-	ENST00000345807.6@CLTB	ENST00000345807.6	protein_coding	176416177,176410257,176397930,176397607,176392455	176416569,176410303,176398047,176397718,176392945	Gene ID= ENSG00000175416.12 TPM= 123.18 Transcript Type= protein_coding
chr5	176392455	176416569	176392455	176416569	-	ENST00000310418.8@CLTB	ENST00000310418.8	protein_coding	176416177,176410257,176397930,176397607,176396479,176392455	176416569,176410303,176398047,176397718,176396532,176392945	Gene ID= ENSG00000175416.12 TPM= 1.75 Transcript Type= protein_coding
chr5	176448355	176510074	176448355	176510074	+	ENST00000261942.6@FAF2	ENST00000261942.6	protein_coding	176448355,176479188,176486355,176488951,176492194,176493999,176494184,176496486,176498914,176500003,176506768	176448470,176479256,176486489,176489027,176492332,176494084,176494275,176496663,176499085,176500146,176510074	Gene ID= ENSG00000113194.12 TPM= 29.19 Transcript Type= protein_coding
chr5	176526697	176537420	176526697	176537420	-	ENST00000274811.8@RNF44	ENST00000274811.8	protein_coding	176536940,176532366,176532004,176531463,176530848,176530582,176530082,176529731,176529523,176529288,176526697	176537420,176532516,176532193,176531630,176531021,176530743,176530206,176529818,176529644,176529387,176529090	Gene ID= ENSG00000146083.11 TPM= 40.87 Transcript Type= protein_coding
chr5	176595802	176610133	176595802	176610133	-	ENST00000303991.4@GPRIN1	ENST00000303991.4	protein_coding	176609999,176595802	176610133,176599877	Gene ID= ENSG00000169258.6 TPM= 5.84 Transcript Type= protein_coding
chr5	176647466	176659051	176647466	176659051	+	transcript5238.chr5.nnic@TSPAN17	transcript5238.chr5.nnic	protein_coding	176647466,176651616,176651776,176652743,176654895,176656078,176656700,176656895,176657518	176647702,176651666,176651900,176652913,176655020,176656125,176656816,176656956,176659051	Gene ID= ENSG00000048140.17 TPM= 5.25 Transcript Type= NA
chr5	176647461	176659051	176647461	176659051	+	transcript5239.chr5.nic@TSPAN17	transcript5239.chr5.nic	protein_coding	176647461,176651616,176651754,176652743,176654895,176656078,176656700,176656895	176647702,176651666,176651900,176652913,176655020,176656125,176656816,176659051	Gene ID= ENSG00000048140.17 TPM= 20.05 Transcript Type= NA
chr5	176647494	176659054	176647494	176659054	+	transcript5242.chr5.nic@TSPAN17	transcript5242.chr5.nic	protein_coding	176647494,176651616,176651754,176652743,176654895,176656078,176656700	176647702,176651666,176651900,176652913,176655020,176656125,176659054	Gene ID= ENSG00000048140.17 TPM= 6.04 Transcript Type= NA
chr5	176647468	176659051	176647468	176659051	+	transcript5248.chr5.nic@TSPAN17	transcript5248.chr5.nic	protein_coding	176647468,176652743,176656078,176656700,176656895,176657518	176647702,176652913,176656125,176656816,176656956,176659051	Gene ID= ENSG00000048140.17 TPM= 5.25 Transcript Type= NA
chr5	176647387	176659020	176647387	176659020	+	ENST00000310032.12@TSPAN17	ENST00000310032.12	protein_coding	176647387,176651616,176651754,176652743,176654895,176656078,176656700,176656895,176657518	176647702,176651666,176651900,176652913,176655020,176656134,176656816,176656956,176659020	Gene ID= ENSG00000048140.17 TPM= 6.04 Transcript Type= protein_coding
chr5	176647502	176659051	176647502	176659051	+	ENST00000508164.5@TSPAN17	ENST00000508164.5	protein_coding	176647502,176651616,176651754,176652743,176654895,176656078,176656700,176656895,176657518	176647702,176651666,176651900,176652913,176655020,176656125,176656816,176656956,176659051	Gene ID= ENSG00000048140.17 TPM= 13.43 Transcript Type= protein_coding
chr5	176810477	176880895	176810477	176880895	+	ENST00000329542.8@UNC5A	ENST00000329542.8	protein_coding	176810477,176862624,176868130,176868561,176868784,176870370,176873968,176874264,176877192,176877535,176877894,176878244,176878475,176879310,176879721	176810820,176862845,176868273,176868664,176868964,176870534,176874156,176874566,176877279,176877703,176878127,176878393,176878639,176879488,176880895	Gene ID= ENSG00000113763.10 TPM= 2.34 Transcript Type= protein_coding
chr5	176880869	176899387	176880869	176899387	-	transcript5265.chr5.nnic@HK3	transcript5265.chr5.nnic	protein_coding	176899267,176896064,176891388,176891037,176890822,176890635,176889645,176889381,176888332,176887451,176887201,176887002,176884039,176883770,176881944,176881692,176881302,176880869	176899387,176896185,176891550,176891191,176890941,176890730,176889744,176889564,176888864,176887746,176887337,176887121,176884134,176883869,176882127,176881750,176881535,176881217	Gene ID= ENSG00000160883.10 TPM= 16.98 Transcript Type= NA
chr5	176880869	176899387	176880869	176899387	-	transcript5272.chr5.nic@HK3	transcript5272.chr5.nic	protein_coding	176899267,176896064,176891388,176891037,176890822,176890635,176889645,176889381,176888332,176887451,176887201,176887002,176884039,176883770,176881944,176881692,176881302,176880869	176899387,176896185,176891550,176891191,176890941,176890730,176889744,176889564,176888864,176887746,176887337,176887121,176884134,176883869,176882127,176881847,176881535,176881217	Gene ID= ENSG00000160883.10 TPM= 128.59 Transcript Type= NA
chr5	176880871	176899332	176880871	176899332	-	ENST00000292432.9@HK3	ENST00000292432.9	protein_coding	176899267,176896064,176891388,176891037,176890822,176890635,176889645,176889381,176888709,176888332,176887451,176887201,176887002,176884039,176883770,176881944,176881692,176881302,176880871	176899332,176896185,176891550,176891191,176890941,176890730,176889744,176889564,176888864,176888565,176887746,176887337,176887121,176884134,176883869,176882127,176881847,176881535,176881217	Gene ID= ENSG00000160883.10 TPM= 140.39 Transcript Type= protein_coding
chr5	176905050	177006792	176905050	177006792	-	transcript5307.chr5.nic@UIMC1	transcript5307.chr5.nic	protein_coding	177006539,176982469,176975396,176970742,176969601,176968555,176958093,176955959,176951474,176943335,176911311,176908523,176907114,176906011,176905050	177006792,176982623,176975480,176970866,176969706,176969291,176958154,176956035,176951577,176943488,176911389,176908694,176907177,176906047,176905492	Gene ID= ENSG00000087206.16 TPM= 5.49 Transcript Type= NA
chr5	176905050	177006792	176905050	177006792	-	transcript5311.chr5.nic@UIMC1	transcript5311.chr5.nic	protein_coding	177006539,176982469,176975396,176970742,176968555,176958093,176955959,176951474,176943335,176911311,176908523,176907114,176906011,176905050	177006792,176982623,176975480,176970866,176969706,176958154,176956035,176951577,176943488,176911389,176908694,176907177,176906047,176905492	Gene ID= ENSG00000087206.16 TPM= 3.74 Transcript Type= NA
chr5	176905050	177006778	176905050	177006778	-	transcript5314.chr5.nic@UIMC1	transcript5314.chr5.nic	protein_coding	177006650,176982469,176975396,176970742,176969601,176958093,176955959,176951474,176943335,176911311,176908523,176907114,176906011,176905050	177006778,176982623,176975480,176970866,176969706,176958154,176956035,176951577,176943488,176911389,176908694,176907177,176906047,176905492	Gene ID= ENSG00000087206.16 TPM= 3.74 Transcript Type= NA
chr5	176905050	177006778	176905050	177006778	-	transcript5318.chr5.nnic@UIMC1	transcript5318.chr5.nnic	protein_coding	177006650,176982469,176975396,176970742,176958093,176955959,176951474,176943335,176911311,176908523,176907114,176906011,176905050	177006778,176982623,176975480,176970866,176958154,176956035,176951577,176943488,176911389,176908694,176907177,176906047,176905492	Gene ID= ENSG00000087206.16 TPM= 3.74 Transcript Type= NA
chr5	176905005	177006408	176905005	177006408	-	ENST00000377227.8@UIMC1	ENST00000377227.8	protein_coding	177006284,176982469,176975396,176970742,176969601,176968555,176958093,176955959,176951474,176943335,176911311,176908523,176907114,176906011,176905005	177006408,176982623,176975480,176970866,176969706,176969291,176958154,176956035,176951577,176943488,176911389,176908694,176907177,176906047,176905492	Gene ID= ENSG00000087206.16 TPM= 5.49 Transcript Type= protein_coding
chr5	177022689	177065965	177022689	177065965	+	transcript5327.chr5.nnic@ZNF346	transcript5327.chr5.nnic	protein_coding	177022689,177041126,177041778,177044389,177062058,177064512	177022913,177041229,177041870,177044533,177062151,177065965	Gene ID= ENSG00000113761.11 TPM= 2.72 Transcript Type= NA
chr5	177022696	177065985	177022696	177065985	+	ENST00000358149.7@ZNF346	ENST00000358149.7	protein_coding	177022696,177041126,177041778,177044389,177050751,177062058,177064512	177022913,177041229,177041870,177044533,177050936,177062151,177065985	Gene ID= ENSG00000113761.11 TPM= 8.56 Transcript Type= protein_coding
chr5	177022732	177065965	177022732	177065965	+	ENST00000511834.5@ZNF346	ENST00000511834.5	protein_coding	177022732,177041126,177041778,177044389,177050703,177062058,177064512	177022913,177041229,177041870,177044533,177050936,177062151,177065965	Gene ID= ENSG00000113761.11 TPM= 1.55 Transcript Type= protein_coding
chr5	177024202	177025803	177024202	177025803	-	transcript5331.chr5.nnic@NA	transcript5331.chr5.nnic	NA	177024202	177025803	Gene ID= novel_gene_chr5_5332 TPM= 5.84 Transcript Type= NA
chr5	177086850	177098144	177086850	177098144	+	transcript5340.chr5.nic@FGFR4	transcript5340.chr5.nic	protein_coding	177086850,177089550,177090390,177090745,177090938,177091685,177092321,177092646,177093138,177093406,177093654,177095330,177095533,177096057,177096287,177096604,177097292,177097527	177087018,177089693,177090653,177090825,177091104,177091808,177092511,177092784,177093331,177093551,177093775,177095440,177095723,177096179,177096357,177096741,177097397,177098144	Gene ID= ENSG00000160867.14 TPM= 12.84 Transcript Type= NA
chr5	177089355	177098144	177089355	177098144	+	transcript5348.chr5.nic@FGFR4	transcript5348.chr5.nic	protein_coding	177089355,177090390,177090745,177090938,177091685,177092321,177092646,177093138,177093406,177093654,177095330,177095533,177096057,177096287,177096604,177097292,177097527	177089693,177090653,177090825,177091104,177091808,177092511,177092784,177093331,177093551,177093775,177095440,177095723,177096179,177096357,177096741,177097397,177098144	Gene ID= ENSG00000160867.14 TPM= 5.84 Transcript Type= NA
chr5	177086886	177098144	177086886	177098144	+	ENST00000292408.8@FGFR4	ENST00000292408.8	protein_coding	177086886,177089550,177090390,177090745,177090938,177091685,177092321,177092646,177093138,177093406,177093654,177095330,177095533,177096057,177096287,177096604,177097292,177097527	177087077,177089693,177090653,177090825,177091104,177091808,177092511,177092784,177093331,177093551,177093775,177095440,177095723,177096179,177096357,177096741,177097397,177098144	Gene ID= ENSG00000160867.14 TPM= 124.93 Transcript Type= protein_coding
chr5	177133798	177136345	177133798	177136345	+	ENST00000602285.1@NSD1	ENST00000602285.1	protein_coding	177133798,177135087	177133952,177136345	Gene ID= ENSG00000165671.19 TPM= 2.34 Transcript Type= retained_intron
chr5	177256277	177257881	177256277	177257881	-	transcript5365.chr5.nnic@NA	transcript5365.chr5.nnic	NA	177256277	177257881	Gene ID= novel_gene_chr5_5366 TPM= 4.67 Transcript Type= NA
chr5	177301198	177303733	177301198	177303733	-	ENST00000478234.5@RAB24	ENST00000478234.5	protein_coding	177303172,177303009,177302752,177302577,177302128,177301925,177301198	177303733,177303077,177302830,177302644,177302496,177301987,177301807	Gene ID= ENSG00000169228.13 TPM= 1.17 Transcript Type= retained_intron
chr5	177301464	177303708	177301464	177303708	-	ENST00000303251.10@RAB24	ENST00000303251.10	protein_coding	177303172,177303009,177302752,177302577,177302397,177302128,177301925,177301464	177303708,177303077,177302830,177302644,177302496,177302178,177301987,177301807	Gene ID= ENSG00000169228.13 TPM= 24.52 Transcript Type= protein_coding
chr5	177301451	177303706	177301451	177303706	-	ENST00000393611.6@RAB24	ENST00000393611.6	protein_coding	177303407,177303172,177303009,177302752,177302577,177302397,177302128,177301925,177301451	177303706,177303320,177303077,177302830,177302644,177302496,177302178,177301987,177301807	Gene ID= ENSG00000169228.13 TPM= 4.67 Transcript Type= protein_coding
chr5	177303774	177306959	177303774	177306959	+	ENST00000303204.8@PRELID1	ENST00000303204.8	protein_coding	177303774,177304625,177305871,177306098,177306422	177304077,177304850,177305984,177306176,177306959	Gene ID= ENSG00000169230.9 TPM= 94.58 Transcript Type= protein_coding
chr5	177307208	177351677	177307208	177351677	-	transcript5368.chr5.nnic@LMAN2	transcript5368.chr5.nnic	protein_coding	177351452,177351173,177338488,177337706,177337363,177337136,177334284,177317631,177312989,177311761,177311379,177310668,177310426,177307781,177307208	177351677,177351291,177338605,177337785,177337524,177337250,177334403,177317788,177313091,177312864,177311484,177310697,177310540,177307964,177307703	Gene ID= ENSG00000169223.14 TPM= 13.23 Transcript Type= NA
chr5	177331562	177351852	177331562	177351852	-	ENST00000303127.11@LMAN2	ENST00000303127.11	protein_coding	177351452,177351173,177338488,177337706,177337363,177337136,177334284,177331562	177351852,177351291,177338605,177337785,177337524,177337250,177334403,177332246	Gene ID= ENSG00000169223.14 TPM= 262.77 Transcript Type= protein_coding
chr5	177357837	177372601	177357837	177372601	+	ENST00000408923.7@RGS14	ENST00000408923.7	protein_coding	177357837,177365963,177366177,177366708,177366891,177367414,177367714,177368157,177368717,177370591,177370905,177371165,177371350,177371475,177371873	177358069,177365984,177366355,177366800,177367034,177367557,177367825,177368266,177368920,177370664,177371031,177371246,177371396,177371589,177372601	Gene ID= ENSG00000169220.17 TPM= 11.68 Transcript Type= protein_coding
chr5	177367314	177372596	177367314	177372596	+	ENST00000425155.6@RGS14	ENST00000425155.6	protein_coding	177367314,177368717,177370588,177370905,177371165,177371350,177371475,177371873	177368266,177368920,177370664,177371031,177371246,177371396,177371589,177372596	Gene ID= ENSG00000169220.17 TPM= 9.34 Transcript Type= retained_intron
chr5	177426678	177442830	177426678	177442830	+	ENST00000355472.9@GRK6	ENST00000355472.9	protein_coding	177426678,177430872,177431995,177432233,177432706,177433147,177433347,177433536,177433914,177434902,177435032,177436073,177436393,177440700,177440919,177441737	177426897,177430967,177432107,177432310,177432806,177433239,177433410,177433676,177434104,177434939,177435121,177436281,177436530,177440837,177441053,177442830	Gene ID= ENSG00000198055.10 TPM= 8.47 Transcript Type= protein_coding
chr5	177426843	177442625	177426843	177442625	+	ENST00000528793.5@GRK6	ENST00000528793.5	protein_coding	177426843,177430872,177431995,177432233,177432706,177433147,177433347,177433536,177433914,177434902,177435032,177436073,177436393,177440700,177440919,177441735	177426897,177430967,177432107,177432310,177432806,177433239,177433410,177433676,177434104,177434939,177435121,177436281,177436530,177440837,177441053,177442625	Gene ID= ENSG00000198055.10 TPM= 19.85 Transcript Type= protein_coding
chr5	177454785	177456286	177454785	177456286	+	transcript5486.chr5.nic@PRR7	transcript5486.chr5.nic	protein_coding	177454785,177455724	177455494,177456286	Gene ID= ENSG00000131188.11 TPM= 2.34 Transcript Type= NA
chr5	177456608	177473741	177456608	177473741	-	ENST00000309007.9@DBN1	ENST00000309007.9	protein_coding	177473436,177468844,177468108,177467743,177467481,177467255,177466911,177466772,177460644,177460432,177459098,177458058,177457655,177456608	177473741,177468899,177468220,177467817,177467627,177467332,177467062,177466835,177460703,177460555,177459268,177458707,177457757,177457503	Gene ID= ENSG00000113758.13 TPM= 33.86 Transcript Type= protein_coding
chr5	177456936	177473637	177456936	177473637	-	ENST00000393565.5@DBN1	ENST00000393565.5	protein_coding	177473436,177468844,177468108,177467743,177467481,177467255,177466911,177466772,177460644,177460432,177459603,177459098,177458058,177457655,177456936	177473637,177468899,177468220,177467817,177467627,177467332,177467062,177466835,177460703,177460555,177459740,177459268,177458707,177457757,177457503	Gene ID= ENSG00000113758.13 TPM= 3.89 Transcript Type= protein_coding
chr5	177456934	177473624	177456934	177473624	-	ENST00000472831.5@DBN1	ENST00000472831.5	protein_coding	177473436,177468844,177468108,177467481,177467255,177466911,177466772,177460644,177460432,177459098,177458058,177457655,177456934	177473624,177468899,177468220,177467817,177467332,177467062,177466835,177460703,177460555,177459268,177458707,177457757,177457503	Gene ID= ENSG00000113758.13 TPM= 3.89 Transcript Type= retained_intron
chr5	177483398	177497654	177483398	177497654	-	transcript5465.chr5.nic@PDLIM7	transcript5465.chr5.nic	protein_coding	177497528,177496417,177492526,177492405,177491807,177491010,177490870,177489771,177489393,177488068,177484070,177483867,177483398	177497654,177496523,177492677,177492435,177491925,177491146,177490906,177490593,177489627,177488248,177484190,177483982,177483730	Gene ID= ENSG00000196923.13 TPM= 6.54 Transcript Type= NA
chr5	177483396	177497583	177483396	177497583	-	ENST00000355841.6@PDLIM7	ENST00000355841.6	protein_coding	177497528,177496417,177492526,177492405,177491807,177491010,177490870,177489771,177489393,177488068,177484070,177483867,177483396	177497583,177496523,177492677,177492435,177491925,177491146,177490906,177489832,177489627,177488248,177484190,177483982,177483730	Gene ID= ENSG00000196923.13 TPM= 83.69 Transcript Type= protein_coding
chr5	177483394	177497561	177483394	177497561	-	ENST00000359895.6@PDLIM7	ENST00000359895.6	protein_coding	177497528,177496417,177492526,177492405,177491404,177491010,177490870,177489771,177489393,177488068,177484070,177483867,177483394	177497561,177496523,177492677,177492435,177491420,177491146,177490906,177489832,177489627,177488248,177484190,177483982,177483730	Gene ID= ENSG00000196923.13 TPM= 20.64 Transcript Type= protein_coding
chr5	177483394	177497561	177483394	177497561	-	ENST00000493815.5@PDLIM7	ENST00000493815.5	protein_coding	177497528,177496417,177492526,177492405,177491807,177491404,177491010,177490870,177489771,177489393,177488068,177484070,177483867,177483394	177497561,177496523,177492677,177492435,177491925,177491420,177491146,177490906,177489832,177489627,177488248,177484190,177483982,177483730	Gene ID= ENSG00000196923.13 TPM= 4.3 Transcript Type= nonsense_mediated_decay
chr5	177483398	177497601	177483398	177497601	-	ENST00000486828.6@PDLIM7	ENST00000486828.6	protein_coding	177497528,177496417,177492526,177492405,177491807,177491010,177490870,177489771,177489393,177488068,177484070,177483867,177483398	177497601,177496523,177492677,177492435,177491925,177491146,177490906,177490031,177489627,177488248,177484190,177483982,177483730	Gene ID= ENSG00000196923.13 TPM= 6.25 Transcript Type= nonsense_mediated_decay
chr5	177490246	177497573	177490246	177497573	-	ENST00000355572.6@PDLIM7	ENST00000355572.6	protein_coding	177497528,177496417,177492526,177492405,177491807,177491010,177490870,177490246	177497573,177496523,177492677,177492435,177491925,177491146,177490906,177490593	Gene ID= ENSG00000196923.13 TPM= 4.67 Transcript Type= protein_coding
chr5	177501904	177509869	177501904	177509869	-	transcript5492.chr5.nic@DOK3	transcript5492.chr5.nic	protein_coding	177509758,177509475,177508237,177505011,177504743,177501904	177509869,177509657,177508542,177505110,177504915,177504660	Gene ID= ENSG00000146094.13 TPM= 18.68 Transcript Type= NA
chr5	177501904	177510400	177501904	177510400	-	transcript5494.chr5.nic@DOK3	transcript5494.chr5.nic	protein_coding	177510260,177509475,177508237,177505011,177504743,177501904	177510400,177509657,177508542,177505110,177504915,177504660	Gene ID= ENSG00000146094.13 TPM= 16.35 Transcript Type= NA
chr5	177503750	177509858	177503750	177509858	-	transcript5496.chr5.nic@DOK3	transcript5496.chr5.nic	protein_coding	177509802,177509475,177508237,177505011,177504743,177503750	177509858,177509575,177508542,177505110,177504915,177504660	Gene ID= ENSG00000146094.13 TPM= 5.06 Transcript Type= NA
chr5	177503750	177511399	177503750	177511399	-	transcript5501.chr5.nic@DOK3	transcript5501.chr5.nic	protein_coding	177509475,177508237,177505011,177504743,177503750	177511399,177508542,177505110,177504915,177504660	Gene ID= ENSG00000146094.13 TPM= 2.34 Transcript Type= NA
chr5	177503750	177510396	177503750	177510396	-	transcript5505.chr5.nic@DOK3	transcript5505.chr5.nic	protein_coding	177508237,177505011,177504743,177503750	177510396,177505110,177504915,177504660	Gene ID= ENSG00000146094.13 TPM= 3.5 Transcript Type= NA
chr5	177511577	177517469	177511577	177517469	-	ENST00000507955.5@DDX41	ENST00000507955.5	protein_coding	177516919,177516725,177516288,177516119,177515929,177515685,177515186,177514916,177514701,177513685,177513353,177513011,177512780,177512496,177512322,177512096,177511577	177517469,177516835,177516447,177516193,177515989,177515821,177515258,177515069,177514837,177513847,177513484,177513082,177512876,177512645,177512393,177512206,177511927	Gene ID= ENSG00000183258.11 TPM= 37.95 Transcript Type= protein_coding
chr5	177511577	177516916	177511577	177516916	-	ENST00000330503.11@DDX41	ENST00000330503.11	protein_coding	177516725,177516288,177516119,177515929,177515685,177515186,177514916,177514701,177513685,177513353,177513011,177512780,177512496,177512322,177512096,177511577	177516916,177516447,177516193,177515989,177515821,177515258,177515069,177514837,177513847,177513484,177513082,177512876,177512645,177512393,177512206,177511927	Gene ID= ENSG00000183258.11 TPM= 12.26 Transcript Type= protein_coding
chr5	177519789	177554584	177519789	177554584	-	transcript5516.chr5.nic@FAM193B	transcript5516.chr5.nic	protein_coding	177554249,177553168,177538905,177537873,177536358,177532443,177531953,177531282,177524185,177523957,177521974,177519789	177554584,177553802,177539042,177538107,177536745,177532641,177532200,177531521,177525205,177524032,177522071,177520181	Gene ID= ENSG00000146067.15 TPM= 5.9 Transcript Type= NA
chr5	177519789	177554582	177519789	177554582	-	transcript5524.chr5.nic@FAM193B	transcript5524.chr5.nic	protein_coding	177553168,177538905,177537873,177536358,177532443,177531953,177531282,177524185,177523957,177521974,177519789	177554582,177539147,177538107,177536745,177532641,177532200,177531521,177525205,177524032,177522071,177520181	Gene ID= ENSG00000146067.15 TPM= 9.06 Transcript Type= NA
chr5	177519789	177554584	177519789	177554584	-	transcript5530.chr5.nic@FAM193B	transcript5530.chr5.nic	protein_coding	177554249,177553168,177547168,177538905,177537873,177536358,177532443,177524185,177523957,177521974,177519789	177554584,177553802,177547228,177539147,177538107,177536745,177532641,177525205,177524032,177522071,177520181	Gene ID= ENSG00000146067.15 TPM= 4.5 Transcript Type= NA
chr5	177519789	177554562	177519789	177554562	-	transcript5536.chr5.nic@FAM193B	transcript5536.chr5.nic	protein_coding	177554249,177538905,177537873,177536358,177532443,177531282,177524185,177523957,177521974,177519789	177554562,177539147,177538107,177536745,177532641,177531521,177525205,177524032,177522071,177520181	Gene ID= ENSG00000146067.15 TPM= 18.83 Transcript Type= NA
chr5	177519789	177554584	177519789	177554584	-	transcript5537.chr5.nic@FAM193B	transcript5537.chr5.nic	protein_coding	177554249,177553168,177538905,177537873,177536358,177532443,177524185,177523957,177521974,177519789	177554584,177553802,177539042,177538107,177536486,177532641,177525205,177524032,177522071,177520181	Gene ID= ENSG00000146067.15 TPM= 4.5 Transcript Type= NA
chr5	177519789	177532640	177519789	177532640	-	transcript5546.chr5.nic@FAM193B	transcript5546.chr5.nic	protein_coding	177531282,177524185,177523957,177521974,177519789	177532640,177525205,177524032,177522071,177520181	Gene ID= ENSG00000146067.15 TPM= 5.99 Transcript Type= NA
chr5	177519789	177554558	177519789	177554558	-	transcript5547.chr5.nnic@FAM193B	transcript5547.chr5.nnic	protein_coding	177554249,177524185,177523957,177521974,177519789	177554558,177525205,177524032,177522071,177520181	Gene ID= ENSG00000146067.15 TPM= 4.5 Transcript Type= NA
chr5	177519788	177554507	177519788	177554507	-	ENST00000514747.5@FAM193B	ENST00000514747.5	protein_coding	177554249,177538905,177537873,177536358,177532443,177524185,177523957,177521974,177519788	177554507,177539147,177538107,177536745,177532641,177525205,177524032,177522071,177520181	Gene ID= ENSG00000146067.15 TPM= 12.67 Transcript Type= protein_coding
chr5	177592158	177596124	177592158	177596124	+	ENST00000332598.6@TMED9	ENST00000332598.6	protein_coding	177592158,177592575,177593650,177594139,177595267	177592398,177592675,177593775,177594285,177596124	Gene ID= ENSG00000184840.11 TPM= 121.43 Transcript Type= protein_coding
chr5	177600100	177610347	177600100	177610347	+	ENST00000029410.9@B4GALT7	ENST00000029410.9	protein_coding	177600100,177604179,177607302,177608539,177608910,177609540	177600260,177604541,177607527,177608622,177609014,177610347	Gene ID= ENSG00000027847.13 TPM= 31.53 Transcript Type= protein_coding
chr5	177610008	177614179	177610008	177614179	+	transcript5567.chr5.nnic@NA	transcript5567.chr5.nnic	NA	177610008	177614179	Gene ID= novel_gene_chr5_5568 TPM= 2.34 Transcript Type= NA
chr5	177614781	177617167	177614781	177617167	-	transcript5569.chr5.nnic@NA	transcript5569.chr5.nnic	NA	177614781	177617167	Gene ID= novel_gene_chr5_5570 TPM= 2.34 Transcript Type= NA
chr5	177617258	177672288	177617258	177672288	-	transcript5553.chr5.nnic@AC139795.1	transcript5553.chr5.nnic	transcribed_unprocessed_pseudogene	177672021,177631366,177627382,177626436,177620473,177619078,177617258	177672288,177632749,177627614,177626505,177620506,177619389,177618706	Gene ID= ENSG00000246596.6 TPM= 2.34 Transcript Type= NA
chr5	177618167	177672256	177618167	177672256	-	transcript5560.chr5.nnic@AC139795.1	transcript5560.chr5.nnic	transcribed_unprocessed_pseudogene	177672021,177631366,177627382,177626436,177620473,177618167	177672256,177632749,177627614,177626505,177620506,177619389	Gene ID= ENSG00000246596.6 TPM= 5.84 Transcript Type= NA
chr5	178113443	178126087	178113443	178126087	+	ENST00000274605.5@N4BP3	ENST00000274605.5	protein_coding	178113443,178119554,178120178,178121098,178121474	178113771,178119913,178120699,178121352,178126087	Gene ID= ENSG00000145911.5 TPM= 15.18 Transcript Type= protein_coding
chr5	178131021	178150565	178131021	178150565	+	transcript5598.chr5.nic@RMND5B	transcript5598.chr5.nic	protein_coding	178131021,178138108,178142583,178142852,178143627,178143942,178146114,178147533,178147729,178147969	178131376,178138258,178142728,178142992,178143727,178144108,178146279,178147635,178147883,178150565	Gene ID= ENSG00000145916.18 TPM= 9.92 Transcript Type= NA
chr5	178131012	178148549	178131012	178148549	+	transcript5601.chr5.nic@RMND5B	transcript5601.chr5.nic	protein_coding	178131012,178138108,178142583,178143627,178143942,178146114,178147533,178147729,178147969	178131054,178138258,178142992,178143727,178144108,178146279,178147635,178147883,178148549	Gene ID= ENSG00000145916.18 TPM= 3.79 Transcript Type= NA
chr5	178130996	178148568	178130996	178148568	+	ENST00000313386.8@RMND5B	ENST00000313386.8	protein_coding	178130996,178131237,178138108,178142583,178142852,178143627,178143942,178146114,178147533,178147729,178147969	178131054,178131376,178138258,178142728,178142992,178143727,178144108,178146279,178147635,178147883,178148568	Gene ID= ENSG00000145916.18 TPM= 27.53 Transcript Type= protein_coding
chr5	178145970	178148540	178145970	178148540	+	ENST00000507937.1@RMND5B	ENST00000507937.1	protein_coding	178145970,178147729,178147969	178147635,178147883,178148540	Gene ID= ENSG00000145916.18 TPM= 1.17 Transcript Type= retained_intron
chr5	178149460	178153967	178149460	178153967	-	ENST00000274606.7@NHP2	ENST00000274606.7	protein_coding	178153658,178153491,178150888,178149460	178153967,178153560,178150993,178149838	Gene ID= ENSG00000145912.8 TPM= 79.4 Transcript Type= protein_coding
chr5	178149482	178153829	178149482	178153829	-	ENST00000314397.8@NHP2	ENST00000314397.8	protein_coding	178153658,178153491,178149482	178153829,178153560,178149838	Gene ID= ENSG00000145912.8 TPM= 4.67 Transcript Type= protein_coding
chr5	178204532	178211163	178204532	178211163	+	transcript5670.chr5.nic@HNRNPAB	transcript5670.chr5.nic	protein_coding	178204532,178204815,178207094,178209330,178210132,178210553	178204740,178206890,178207225,178209447,178210272,178211163	Gene ID= ENSG00000197451.11 TPM= 2.34 Transcript Type= NA
chr5	178204507	178211163	178204507	178211163	+	ENST00000358344.7@HNRNPAB	ENST00000358344.7	protein_coding	178204507,178204815,178205842,178206732,178207094,178209330,178210132,178210553	178204740,178205046,178206010,178206890,178207225,178209447,178210272,178211163	Gene ID= ENSG00000197451.11 TPM= 36.2 Transcript Type= protein_coding
chr5	178204539	178211142	178204539	178211142	+	ENST00000355836.9@HNRNPAB	ENST00000355836.9	protein_coding	178204539,178204815,178205842,178206732,178207094,178209330,178210553	178204740,178205046,178206010,178206890,178207225,178209447,178211142	Gene ID= ENSG00000197451.11 TPM= 12.84 Transcript Type= protein_coding
chr5	178204571	178211142	178204571	178211142	+	ENST00000504898.5@HNRNPAB	ENST00000504898.5	protein_coding	178204571,178205842,178206732,178207094,178209330,178210132,178210553	178205046,178206010,178206890,178207225,178209447,178210272,178211142	Gene ID= ENSG00000197451.11 TPM= 3.5 Transcript Type= protein_coding
chr5	178204548	178211149	178204548	178211149	+	ENST00000506259.5@HNRNPAB	ENST00000506259.5	protein_coding	178204548,178205842,178206732,178207094,178209330,178210553	178205046,178206010,178206890,178207225,178209447,178211149	Gene ID= ENSG00000197451.11 TPM= 2.34 Transcript Type= protein_coding
chr5	178208587	178232821	178208587	178232821	-	transcript5631.chr5.nic@PHYKPL	transcript5631.chr5.nic	protein_coding	178231405,178229940,178225355,178224642,178224448,178222852,178222355,178215276,178214796,178212973,178211890,178208587	178232821,178230099,178225429,178224729,178224564,178222934,178222580,178215430,178214885,178213103,178211970,178208915	Gene ID= ENSG00000175309.14 TPM= 6.13 Transcript Type= NA
chr5	178208639	178232843	178208639	178232843	-	transcript5644.chr5.nic@PHYKPL	transcript5644.chr5.nic	protein_coding	178232492,178231405,178229940,178225355,178224616,178222852,178222355,178215276,178214796,178212973,178211890,178208639	178232843,178231523,178230099,178225429,178224729,178222934,178222545,178215430,178214885,178213103,178211970,178208915	Gene ID= ENSG00000175309.14 TPM= 3.5 Transcript Type= NA
chr5	178208497	178232785	178208497	178232785	-	ENST00000308158.9@PHYKPL	ENST00000308158.9	protein_coding	178232492,178231405,178229940,178225355,178224642,178224448,178222852,178222355,178215276,178214796,178212973,178211890,178208497	178232785,178231523,178230099,178225429,178224729,178224564,178222934,178222580,178215430,178214885,178213103,178211970,178208915	Gene ID= ENSG00000175309.14 TPM= 4.67 Transcript Type= protein_coding
chr5	178208584	178232791	178208584	178232791	-	ENST00000489262.5@PHYKPL	ENST00000489262.5	protein_coding	178231669,178231405,178229940,178225355,178224642,178224448,178222852,178222355,178215276,178214796,178212973,178211890,178208584	178232791,178231523,178230099,178225429,178224729,178224564,178222934,178222580,178215430,178214885,178213103,178211970,178208915	Gene ID= ENSG00000175309.14 TPM= 7.3 Transcript Type= retained_intron
chr5	178208583	178210109	178208583	178210109	-	transcript5684.chr5.nnic@NA	transcript5684.chr5.nnic	NA	178208583	178210109	Gene ID= novel_gene_chr5_5685 TPM= 2.34 Transcript Type= NA
chr5	178237618	178590555	178237618	178590555	-	ENST00000390654.7@COL23A1	ENST00000390654.7	protein_coding	178589904,178560682,178306875,178290362,178288324,178270337,178268730,178267307,178263208,178262217,178261722,178259721,178257523,178256866,178256353,178254949,178252544,178250061,178249117,178248192,178247775,178247526,178246391,178246254,178245942,178242341,178242042,178239141,178237618	178590555,178560748,178306919,178290369,178288350,178270363,178268756,178267333,178263324,178262252,178261748,178259747,178257567,178256928,178256397,178255026,178252597,178250105,178249206,178248254,178247831,178247552,178246453,178246307,178245968,178242394,178242128,178239179,178238700	Gene ID= ENSG00000050767.15 TPM= 5.84 Transcript Type= protein_coding
chr5	178603496	178627055	178603496	178627055	-	transcript5692.chr5.nnic@CLK4	transcript5692.chr5.nnic	protein_coding	178626946,178623256,178622393,178619838,178618556,178616882,178613727,178613473,178612796,178612416,178608376,178605303,178603844,178603496	178627055,178623416,178622459,178619896,178618778,178616948,178613843,178613639,178612890,178612545,178608458,178605382,178603934,178603757	Gene ID= ENSG00000113240.12 TPM= 2.34 Transcript Type= NA
chr5	178602664	178627138	178602664	178627138	-	transcript5695.chr5.nic@CLK4	transcript5695.chr5.nic	protein_coding	178626946,178623256,178619838,178618556,178616882,178613727,178613473,178612796,178612416,178608376,178605303,178603844,178602664	178627138,178623416,178619896,178618778,178616948,178613843,178613639,178612890,178612545,178608458,178605382,178603934,178603757	Gene ID= ENSG00000113240.12 TPM= 6.22 Transcript Type= NA
chr5	178602664	178627138	178602664	178627138	-	transcript5701.chr5.nic@CLK4	transcript5701.chr5.nic	protein_coding	178626946,178623256,178618556,178616882,178613727,178613473,178612796,178612416,178608376,178605303,178603844,178602664	178627138,178623416,178618778,178616948,178613843,178613639,178612890,178612545,178608458,178605382,178603934,178603757	Gene ID= ENSG00000113240.12 TPM= 3.89 Transcript Type= NA
chr5	178603270	178620709	178603270	178620709	-	transcript5702.chr5.nic@CLK4	transcript5702.chr5.nic	protein_coding	178619838,178618556,178617344,178616882,178613727,178613473,178612796,178612416,178608376,178605303,178603844,178603270	178620709,178618778,178617434,178616948,178613843,178613639,178612890,178612545,178608458,178605382,178603934,178603757	Gene ID= ENSG00000113240.12 TPM= 2.34 Transcript Type= NA
chr5	178602664	178627041	178602664	178627041	-	transcript5703.chr5.nic@CLK4	transcript5703.chr5.nic	protein_coding	178626946,178623256,178616882,178613727,178613473,178612796,178612416,178608376,178605303,178603844,178602664	178627041,178623416,178618778,178613843,178613639,178612890,178612545,178608458,178605382,178603934,178603757	Gene ID= ENSG00000113240.12 TPM= 3.5 Transcript Type= NA
chr5	178602664	178627114	178602664	178627114	-	ENST00000316308.8@CLK4	ENST00000316308.8	protein_coding	178626946,178623256,178618556,178617344,178616882,178613727,178613473,178612796,178612416,178608376,178605303,178603844,178602664	178627114,178623416,178618778,178617434,178616948,178613843,178613639,178612890,178612545,178608458,178605382,178603934,178603757	Gene ID= ENSG00000113240.12 TPM= 6.22 Transcript Type= protein_coding
chr5	178711592	178730702	178711592	178730702	-	ENST00000335815.6@ZNF354A	ENST00000335815.6	protein_coding	178730556,178728990,178726999,178725376,178711592	178730702,178729073,178727125,178725471,178713621	Gene ID= ENSG00000169131.11 TPM= 12.84 Transcript Type= protein_coding
chr5	178859953	178885028	178859953	178885028	+	ENST00000322434.7@ZNF354B	ENST00000322434.7	protein_coding	178859953,178860997,178866244,178866976,178882709	178860127,178861080,178866370,178867071,178885028	Gene ID= ENSG00000178338.10 TPM= 1.17 Transcript Type= protein_coding
chr5	179023752	179035064	179023752	179035064	+	ENST00000444149.6@ZNF879	ENST00000444149.6	protein_coding	179023752,179024970,179027473,179028032,179032205	179023904,179025037,179027599,179028127,179035064	Gene ID= ENSG00000234284.6 TPM= 3.5 Transcript Type= protein_coding
chr5	179060415	179083537	179060415	179083537	+	ENST00000315475.6@ZNF354C	ENST00000315475.6	protein_coding	179060415,179062015,179076445,179077071,179078683	179060666,179062095,179076571,179077166,179083537	Gene ID= ENSG00000177932.6 TPM= 2.34 Transcript Type= protein_coding
chr5	179110851	179345430	179110851	179345430	-	ENST00000251582.11@ADAMTS2	ENST00000251582.11	protein_coding	179345190,179343767,179272911,179207513,179181072,179158723,179154814,179154049,179153491,179152142,179139890,179137769,179135909,179132777,179132230,179129932,179127959,179125998,179124973,179122644,179121661,179110851	179345430,179344161,179273064,179207715,179181155,179158879,179154919,179154192,179153623,179152255,179140035,179137944,179136042,179132900,179132310,179130098,179128118,179126130,179125180,179122773,179121750,179114324	Gene ID= ENSG00000087116.14 TPM= 14.01 Transcript Type= protein_coding
chr5	179150888	179345430	179150888	179345430	-	ENST00000274609.5@ADAMTS2	ENST00000274609.5	protein_coding	179345190,179343767,179272911,179207513,179181072,179158723,179154814,179154049,179153491,179152142,179150888	179345430,179344161,179273064,179207715,179181155,179158879,179154919,179154192,179153623,179152255,179151200	Gene ID= ENSG00000087116.14 TPM= 8.17 Transcript Type= protein_coding
chr5	179529590	179530797	179529590	179530797	-	transcript5753.chr5.nnic@NA	transcript5753.chr5.nnic	NA	179529590	179530797	Gene ID= novel_gene_chr5_5754 TPM= 2.34 Transcript Type= NA
chr5	179550553	179610012	179550553	179610012	+	transcript5757.chr5.nic@RUFY1	transcript5757.chr5.nic	protein_coding	179550553,179555650,179560025,179562547,179567461,179569302,179577075,179580947,179585796,179589546,179591625,179593478,179594866,179596562,179598692,179601892,179605876,179607582,179609376	179550879,179555790,179560198,179562664,179567562,179569425,179577136,179581012,179585865,179589647,179591741,179593645,179594963,179596681,179598821,179601986,179605924,179607659,179610012	Gene ID= ENSG00000176783.14 TPM= 13.63 Transcript Type= NA
chr5	179559692	179610012	179559692	179610012	+	ENST00000393438.6@RUFY1	ENST00000393438.6	protein_coding	179559692,179560025,179562547,179567461,179569302,179577075,179580947,179585796,179589546,179591625,179593478,179594866,179596562,179598692,179601892,179605876,179607582,179609376	179559835,179560198,179562664,179567562,179569425,179577136,179581012,179585865,179589647,179591741,179593645,179594963,179596681,179598821,179601986,179605924,179607659,179610012	Gene ID= ENSG00000176783.14 TPM= 4.29 Transcript Type= protein_coding
chr5	179550549	179610012	179550549	179610012	+	transcript5766.chr5.nic@RUFY1	transcript5766.chr5.nic	protein_coding	179550549,179560025,179562547,179567461,179569302,179577075,179585796,179589546,179591625,179593478,179594866,179596562,179598692,179601892,179605876,179607582,179609376	179550879,179560198,179562664,179567562,179569425,179577136,179585865,179589647,179591741,179593645,179594963,179596681,179598821,179601986,179605924,179607659,179610012	Gene ID= ENSG00000176783.14 TPM= 8.17 Transcript Type= NA
chr5	179550558	179610026	179550558	179610026	+	ENST00000319449.8@RUFY1	ENST00000319449.8	protein_coding	179550558,179560025,179562547,179567461,179569302,179577075,179580947,179585796,179589546,179591625,179593478,179594866,179596562,179598692,179601892,179605876,179607582,179609376	179550879,179560198,179562664,179567562,179569425,179577136,179581012,179585865,179589647,179591741,179593645,179594963,179596681,179598821,179601986,179605924,179607659,179610026	Gene ID= ENSG00000176783.14 TPM= 81.35 Transcript Type= protein_coding
chr5	179614178	179623710	179614178	179623710	-	ENST00000393432.8@HNRNPH1	ENST00000393432.8	protein_coding	179623595,179623037,179621242,179620892,179619269,179618145,179617989,179617799,179617514,179617051,179616869,179616126,179615546,179614178	179623710,179623164,179621397,179621035,179619407,179618323,179618060,179617932,179617649,179617110,179616958,179616218,179615595,179614959	Gene ID= ENSG00000169045.17 TPM= 19.94 Transcript Type= protein_coding
chr5	179614181	179623674	179614181	179623674	-	transcript5787.chr5.nic@HNRNPH1	transcript5787.chr5.nic	protein_coding	179623595,179623037,179621242,179620892,179619269,179618145,179617989,179617799,179617514,179617051,179616869,179616126,179614181	179623674,179623164,179621397,179621035,179619407,179618323,179618060,179617932,179617649,179617110,179616958,179616218,179614959	Gene ID= ENSG00000169045.17 TPM= 11.38 Transcript Type= NA
chr5	179614181	179623673	179614181	179623673	-	transcript5795.chr5.nic@HNRNPH1	transcript5795.chr5.nic	protein_coding	179623636,179623037,179621242,179620892,179619269,179618145,179617989,179617799,179617514,179617021,179616126,179614181	179623673,179623164,179621397,179621035,179619407,179618323,179618060,179617932,179617649,179617110,179616218,179614959	Gene ID= ENSG00000169045.17 TPM= 10.22 Transcript Type= NA
chr5	179614181	179623674	179614181	179623674	-	transcript5797.chr5.nic@HNRNPH1	transcript5797.chr5.nic	protein_coding	179623636,179623037,179621242,179618145,179617989,179617799,179617514,179617051,179616869,179616126,179614181	179623674,179623164,179621397,179621035,179618060,179617932,179617649,179617110,179616958,179616218,179614959	Gene ID= ENSG00000169045.17 TPM= 2.72 Transcript Type= NA
chr5	179614180	179622821	179614180	179622821	-	transcript5798.chr5.nic@HNRNPH1	transcript5798.chr5.nic	protein_coding	179621242,179618145,179617989,179617799,179617514,179617051,179616869,179616126,179615546,179614180	179622821,179621035,179618060,179617932,179617649,179617110,179616958,179616218,179615595,179614959	Gene ID= ENSG00000169045.17 TPM= 6.04 Transcript Type= NA
chr5	179614181	179622862	179614181	179622862	-	transcript5804.chr5.nic@HNRNPH1	transcript5804.chr5.nic	protein_coding	179618145,179617989,179617799,179617514,179617051,179616869,179616126,179614181	179622862,179618060,179617932,179617649,179617110,179616958,179616218,179614959	Gene ID= ENSG00000169045.17 TPM= 5.64 Transcript Type= NA
chr5	179614179	179623721	179614179	179623721	-	ENST00000442819.6@HNRNPH1	ENST00000442819.6	protein_coding	179623636,179623037,179621242,179620892,179619269,179618145,179617989,179617799,179617514,179617051,179616869,179616126,179615546,179614179	179623721,179623164,179621397,179621035,179619407,179618323,179618060,179617932,179617649,179617110,179616958,179616218,179615595,179614959	Gene ID= ENSG00000169045.17 TPM= 16.44 Transcript Type= protein_coding
chr5	179658236	179664432	179658236	179664432	+	ENST00000514793.1@AC136604.3	ENST00000514793.1	antisense_RNA	179658236,179662975,179664323	179658481,179663103,179664432	Gene ID= ENSG00000250999.1 TPM= 1.17 Transcript Type= antisense_RNA
chr5	179698906	179730925	179698906	179730925	+	ENST00000247461.8@CANX	ENST00000247461.8	protein_coding	179698906,179705679,179706258,179707132,179708239,179708978,179709873,179716105,179719668,179720404,179722804,179723660,179724657,179726680,179728591	179699102,179705852,179706331,179707190,179708380,179709059,179710065,179716294,179719781,179720560,179723019,179723779,179724783,179726759,179730925	Gene ID= ENSG00000127022.14 TPM= 775.87 Transcript Type= protein_coding
chr5	179698906	179730925	179698906	179730925	+	ENST00000452673.6@CANX	ENST00000452673.6	protein_coding	179698906,179705679,179706258,179707132,179708239,179708978,179709873,179716105,179719668,179720404,179722804,179723660,179724657,179726680,179728591	179699049,179705852,179706331,179707190,179708380,179709059,179710065,179716294,179719781,179720560,179723019,179723779,179724783,179726759,179730925	Gene ID= ENSG00000127022.14 TPM= 67.14 Transcript Type= protein_coding
chr5	179732850	179777286	179732850	179777286	+	ENST00000292599.3@MAML1	ENST00000292599.3	protein_coding	179732850,179765326,179768850,179771147,179773895	179733427,179766741,179769089,179771243,179777286	Gene ID= ENSG00000161021.12 TPM= 23.35 Transcript Type= protein_coding
chr5	179793980	179796647	179793980	179796647	+	ENST00000465572.6@LTC4S	ENST00000465572.6	protein_coding	179793980,179795584,179795941,179796253	179794138,179795856,179796022,179796647	Gene ID= ENSG00000213316.9 TPM= 7.01 Transcript Type= retained_intron
chr5	179793981	179796512	179793981	179796512	+	transcript5924.chr5.nic@LTC4S	transcript5924.chr5.nic	protein_coding	179793981,179795584,179796253	179794138,179796022,179796512	Gene ID= ENSG00000213316.9 TPM= 3.5 Transcript Type= NA
chr5	179793986	179796512	179793986	179796512	+	ENST00000292596.14@LTC4S	ENST00000292596.14	protein_coding	179793986,179795584,179795786,179795941,179796253	179794138,179795683,179795856,179796022,179796512	Gene ID= ENSG00000213316.9 TPM= 19.85 Transcript Type= protein_coding
chr5	179794013	179796511	179794013	179796511	+	transcript5937.chr5.nnic@NA	transcript5937.chr5.nnic	NA	179794013	179796511	Gene ID= novel_gene_chr5_5938 TPM= 17.51 Transcript Type= NA
chr5	179797610	179806874	179797610	179806874	-	transcript5864.chr5.nnic@MGAT4B	transcript5864.chr5.nnic	protein_coding	179806712,179806487,179801784,179801554,179801334,179800907,179800484,179800184,179799954,179799506,179799203,179798928,179798513,179798347,179798165,179797610	179806874,179806672,179801969,179801694,179801467,179800953,179800597,179800259,179800068,179799636,179799310,179799121,179798591,179798434,179798277,179798068	Gene ID= ENSG00000161013.16 TPM= 9.43 Transcript Type= NA
chr5	179797597	179806952	179797597	179806952	-	transcript5873.chr5.nic@MGAT4B	transcript5873.chr5.nic	protein_coding	179806487,179801784,179801554,179801334,179800907,179800484,179800184,179799954,179799506,179799203,179798928,179798513,179798347,179797597	179806952,179801969,179801694,179801467,179800953,179800597,179800259,179800068,179799636,179799310,179799121,179798591,179798434,179798277	Gene ID= ENSG00000161013.16 TPM= 4.38 Transcript Type= NA
chr5	179797597	179806934	179797597	179806934	-	ENST00000292591.11@MGAT4B	ENST00000292591.11	protein_coding	179806487,179801784,179801554,179801334,179800907,179800484,179800184,179799954,179799506,179799203,179798928,179798513,179798347,179798165,179797597	179806934,179801969,179801694,179801467,179800953,179800597,179800259,179800068,179799636,179799310,179799121,179798591,179798434,179798277,179798068	Gene ID= ENSG00000161013.16 TPM= 127.36 Transcript Type= protein_coding
chr5	179820759	179838078	179820759	179838078	+	ENST00000389805.8@SQSTM1	ENST00000389805.8	protein_coding	179820759,179822958,179823858,179824182,179825146,179833032,179833587,179836436	179821141,179823053,179824087,179824323,179825226,179833246,179833782,179838078	Gene ID= ENSG00000161011.19 TPM= 58.06 Transcript Type= protein_coding
chr5	179806398	179813024	179806398	179813024	+	ENST00000506042.5@SQSTM1	ENST00000506042.5	protein_coding	179806398,179811574,179812407	179806591,179811682,179813024	Gene ID= ENSG00000161011.19 TPM= 1.17 Transcript Type= processed_transcript
chr5	179834253	179837252	179834253	179837252	+	transcript5935.chr5.nnic@NA	transcript5935.chr5.nnic	NA	179834253	179837252	Gene ID= novel_gene_chr5_5936 TPM= 27.67 Transcript Type= NA
chr5	179837274	179858845	179837274	179858845	-	transcript5903.chr5.nnic@MRNIP	transcript5903.chr5.nnic	protein_coding	179858731,179853378,179847978,179844152,179841907,179840267,179837274	179858845,179853437,179848066,179844227,179842064,179840959,179839860	Gene ID= ENSG00000161010.14 TPM= 3.5 Transcript Type= NA
chr5	179837276	179858887	179837276	179858887	-	ENST00000292586.10@MRNIP	ENST00000292586.10	protein_coding	179858731,179853378,179847978,179844152,179841907,179840872,179837276	179858887,179853437,179848066,179844227,179842064,179840959,179837885	Gene ID= ENSG00000161010.14 TPM= 7.01 Transcript Type= protein_coding
chr5	179837276	179858845	179837276	179858845	-	transcript5905.chr5.nnic@MRNIP	transcript5905.chr5.nnic	protein_coding	179858731,179853378,179847978,179844152,179841907,179840332,179837276	179858845,179853437,179848066,179844227,179842064,179840959,179839004	Gene ID= ENSG00000161010.14 TPM= 3.5 Transcript Type= NA
chr5	179837276	179858808	179837276	179858808	-	ENST00000518219.5@MRNIP	ENST00000518219.5	protein_coding	179858731,179853378,179847978,179844152,179841907,179837276	179858808,179853437,179848066,179844227,179842064,179840959	Gene ID= ENSG00000161010.14 TPM= 4.67 Transcript Type= protein_coding
chr5	179851432	179852297	179851432	179852297	+	transcript5943.chr5.nnic@NA	transcript5943.chr5.nnic	NA	179851432	179852297	Gene ID= novel_gene_chr5_5944 TPM= 2.34 Transcript Type= NA
chr5	179862738	179907939	179862738	179907939	-	transcript5960.chr5.nic@TBC1D9B	transcript5960.chr5.nic	protein_coding	179907704,179904702,179899189,179894386,179893209,179891379,179888103,179879628,179879047,179878309,179875920,179874902,179873119,179871462,179870255,179869769,179867778,179865838,179865254,179862738	179907939,179904812,179899307,179894614,179893467,179891586,179888312,179879789,179879197,179878523,179876037,179875187,179873248,179872990,179870495,179869834,179867849,179865888,179865360,179864128	Gene ID= ENSG00000197226.12 TPM= 15.03 Transcript Type= NA
chr5	179862066	179907856	179862066	179907856	-	ENST00000355235.7@TBC1D9B	ENST00000355235.7	protein_coding	179907704,179904702,179899189,179894386,179893209,179891379,179888103,179879628,179879047,179878309,179875920,179874902,179873119,179872892,179871462,179870255,179869769,179867778,179865838,179865254,179862066	179907856,179904812,179899307,179894614,179893467,179891586,179888312,179879789,179879197,179878523,179876037,179875187,179873248,179872990,179871530,179870495,179869834,179867849,179865888,179865360,179864128	Gene ID= ENSG00000197226.12 TPM= 132.56 Transcript Type= protein_coding
chr5	179862066	179907859	179862066	179907859	-	ENST00000356834.7@TBC1D9B	ENST00000356834.7	protein_coding	179907704,179904702,179899189,179894386,179893209,179891379,179888103,179879628,179879047,179878309,179875920,179874902,179873119,179872892,179871462,179870255,179869769,179867778,179867445,179865838,179865254,179862066	179907859,179904812,179899307,179894614,179893467,179891586,179888312,179879789,179879197,179878523,179876037,179875187,179873248,179872990,179871530,179870495,179869834,179867849,179867495,179865888,179865360,179864128	Gene ID= ENSG00000197226.12 TPM= 19.3 Transcript Type= protein_coding
chr5	179955480	180071728	179955480	180071728	-	transcript5970.chr5.nnic@RNF130	transcript5970.chr5.nnic	protein_coding	180071456,180040453,180013157,179980533,179980129,179978203,179970410,179966806,179963471,179955480	180071728,180040647,180013311,179980610,179980200,179978285,179970506,179967010,179963564,179955669	Gene ID= ENSG00000113269.13 TPM= 12.84 Transcript Type= NA
chr5	180235795	180292081	180235795	180292081	-	transcript5983.chr5.nic@MAPK9	transcript5983.chr5.nic	protein_coding	180291848,180286975,180280440,180269280,180264781,180261684,180248973,180247439,180242573,180241031,180239924,180238332,180235795	180292081,180287067,180280608,180269409,180264839,180261822,180249138,180247510,180242755,180241155,180239987,180238403,180236526	Gene ID= ENSG00000050748.17 TPM= 12.84 Transcript Type= NA
chr5	180233143	180292099	180233143	180292099	-	ENST00000452135.6@MAPK9	ENST00000452135.6	protein_coding	180291848,180280440,180269280,180264781,180261684,180248973,180247439,180242573,180241031,180239924,180238332,180233143	180292099,180280608,180269409,180264839,180261822,180249138,180247510,180242755,180241155,180239987,180238403,180236526	Gene ID= ENSG00000050748.17 TPM= 17.51 Transcript Type= protein_coding
chr5	180235777	180292102	180235777	180292102	-	transcript5988.chr5.nnic@MAPK9	transcript5988.chr5.nnic	protein_coding	180291848,180280440,180269280,180264781,180261684,180248973,180247439,180242573,180241031,180239924,180235777	180292102,180280608,180269409,180264839,180261822,180249138,180247510,180242755,180241155,180239987,180236526	Gene ID= ENSG00000050748.17 TPM= 2.34 Transcript Type= NA
chr5	180235795	180292073	180235795	180292073	-	transcript5990.chr5.nnic@MAPK9	transcript5990.chr5.nnic	protein_coding	180291848,180269280,180264781,180261684,180248973,180247439,180242573,180241031,180239924,180238332,180235795	180292073,180269409,180264839,180261822,180249138,180247510,180242755,180241155,180239987,180238403,180236526	Gene ID= ENSG00000050748.17 TPM= 2.34 Transcript Type= NA
chr5	180233594	180292056	180233594	180292056	-	ENST00000393360.7@MAPK9	ENST00000393360.7	protein_coding	180291848,180280440,180269280,180264781,180261684,180248973,180247439,180242573,180241031,180239924,180238332,180233594	180292056,180280608,180269409,180264839,180261822,180249138,180247510,180242755,180241155,180239987,180238403,180236531	Gene ID= ENSG00000050748.17 TPM= 16.35 Transcript Type= protein_coding
chr5	180293038	180295244	180293038	180295244	+	transcript5996.chr5.nnic@NA	transcript5996.chr5.nnic	NA	180293038	180295244	Gene ID= novel_gene_chr5_5997 TPM= 2.34 Transcript Type= NA
chr5	180300690	180353387	180300690	180353387	-	ENST00000253778.12@GFPT2	ENST00000253778.12	protein_coding	180353211,180338493,180336479,180335828,180331495,180330700,180328277,180324816,180324188,180318793,180316963,180316764,180316341,180313807,180312430,180307176,180304772,180302423,180300690	180353387,180338600,180336577,180335953,180331553,180330834,180328338,180324895,180324305,180318956,180317058,180316861,180316461,180313964,180312544,180307303,180304939,180302584,180301608	Gene ID= ENSG00000131459.12 TPM= 39.7 Transcript Type= protein_coding
chr5	180300699	180353366	180300699	180353366	-	transcript6002.chr5.nnic@GFPT2	transcript6002.chr5.nnic	protein_coding	180353211,180338493,180336479,180335828,180331495,180330700,180328277,180324816,180324188,180318793,180316963,180316764,180316341,180313807,180312430,180307176,180304772,180300699	180353366,180338600,180336577,180335953,180331553,180330834,180328338,180324895,180324305,180318956,180317058,180316861,180316461,180313964,180312544,180307303,180304939,180301608	Gene ID= ENSG00000131459.12 TPM= 3.5 Transcript Type= NA
chr5	180315170	180353366	180315170	180353366	-	transcript6004.chr5.nic@GFPT2	transcript6004.chr5.nic	protein_coding	180353211,180338493,180336479,180335828,180331495,180330700,180328277,180324816,180324188,180318793,180316963,180316764,180315170	180353366,180338600,180336577,180335953,180331553,180330834,180328338,180324895,180324305,180318956,180317058,180316861,180316461	Gene ID= ENSG00000131459.12 TPM= 2.34 Transcript Type= NA
chr5	180494356	180578353	180494356	180578353	+	transcript6009.chr5.nic@CNOT6	transcript6009.chr5.nic	protein_coding	180494356,180529275,180549931,180553386,180564489,180564675,180565820,180567088,180567849,180569110,180571230,180573988	180494763,180529388,180550117,180553471,180564578,180564743,180565977,180567242,180568003,180569340,180571432,180578353	Gene ID= ENSG00000113300.11 TPM= 4.67 Transcript Type= NA
chr5	180494417	180578353	180494417	180578353	+	ENST00000261951.8@CNOT6	ENST00000261951.8	protein_coding	180494417,180529275,180549931,180553386,180564489,180564675,180565820,180567088,180567849,180569110,180571230,180573988	180494763,180529388,180550117,180553471,180564593,180564743,180565977,180567242,180568003,180569340,180571432,180578353	Gene ID= ENSG00000113300.11 TPM= 11.68 Transcript Type= protein_coding
chr5	180590103	180591540	180590103	180591540	-	ENST00000292641.3@SCGB3A1	ENST00000292641.3	protein_coding	180591411,180590600,180590103	180591540,180590838,180590254	Gene ID= ENSG00000161055.3 TPM= 24.52 Transcript Type= protein_coding
chr5	180601506	180649624	180601506	180649624	-	ENST00000261937.10@FLT4	ENST00000261937.10	protein_coding	180649488,180631682,180630555,180630225,180629943,180629696,180629259,180628882,180626111,180625869,180623935,180622731,180621542,180621106,180620876,180620609,180620173,180619665,180619253,180619021,180618770,180616900,180616367,180614068,180613011,180612506,180611331,180609905,180608968,180601506	180649624,180631778,180630799,180630337,180630105,180629835,180629427,180628999,180626265,180626031,180624061,180622839,180621904,180621252,180621007,180620715,180620308,180619769,180619366,180619109,180618920,180616994,180616489,180614179,180613110,180612611,180611479,180610025,180609053,180603390	Gene ID= ENSG00000037280.15 TPM= 50.21 Transcript Type= protein_coding
chr5	180790548	180810135	180790548	180810135	-	transcript6024.chr5.nnic@MGAT1	transcript6024.chr5.nnic	protein_coding	180810040,180809010,180808648,180790548	180810135,180809076,180808810,180793097	Gene ID= ENSG00000131446.16 TPM= 24.46 Transcript Type= NA
chr5	180790541	180802834	180790541	180802834	-	transcript6026.chr5.nnic@MGAT1	transcript6026.chr5.nnic	protein_coding	180802680,180795859,180790541	180802834,180795875,180793097	Gene ID= ENSG00000131446.16 TPM= 25.4 Transcript Type= NA
chr5	180790548	180815635	180790548	180815635	-	transcript6032.chr5.nic@MGAT1	transcript6032.chr5.nic	protein_coding	180815414,180808502,180790548	180815635,180809076,180793097	Gene ID= ENSG00000131446.16 TPM= 24.23 Transcript Type= NA
chr5	180790548	180810423	180790548	180810423	-	transcript6036.chr5.nic@MGAT1	transcript6036.chr5.nic	protein_coding	180810192,180808648,180790548	180810423,180809076,180793097	Gene ID= ENSG00000131446.16 TPM= 26.21 Transcript Type= NA
chr5	180790548	180815635	180790548	180815635	-	transcript6039.chr5.nic@MGAT1	transcript6039.chr5.nic	protein_coding	180815414,180808648,180790548	180815635,180809076,180793097	Gene ID= ENSG00000131446.16 TPM= 36.72 Transcript Type= NA
chr5	180790543	180802885	180790543	180802885	-	ENST00000307826.4@MGAT1	ENST00000307826.4	protein_coding	180802680,180790543	180802885,180793097	Gene ID= ENSG00000131446.16 TPM= 431.72 Transcript Type= protein_coding
chr5	180790548	180809829	180790548	180809829	-	ENST00000446023.6@MGAT1	ENST00000446023.6	protein_coding	180809634,180808648,180790548	180809829,180809076,180793097	Gene ID= ENSG00000131446.16 TPM= 29.72 Transcript Type= protein_coding
chr5	180810226	180811383	180810226	180811383	+	transcript6054.chr5.nnic@NA	transcript6054.chr5.nnic	NA	180810226	180811383	Gene ID= novel_gene_chr5_6055 TPM= 2.34 Transcript Type= NA
chr5	180812626	180815616	180812626	180815616	-	transcript6056.chr5.nnic@NA	transcript6056.chr5.nnic	NA	180812626	180815616	Gene ID= novel_gene_chr5_6057 TPM= 4.67 Transcript Type= NA
chr5	180829954	180831605	180829954	180831605	-	ENST00000623091.1@HEIH	ENST00000623091.1	TEC	180829954	180831605	Gene ID= ENSG00000278970.1 TPM= 100.41 Transcript Type= TEC
chr5	180830962	180835705	180830962	180835705	+	transcript6058.chr5.nnic@LINC00847	transcript6058.chr5.nnic	lincRNA	180830962,180834312,180835422	180831806,180835051,180835705	Gene ID= ENSG00000245060.6 TPM= 3.5 Transcript Type= NA
chr5	180831024	180835726	180831024	180835726	+	ENST00000502162.2@LINC00847	ENST00000502162.2	lincRNA	180831024,180832673,180834312	180831229,180832860,180835726	Gene ID= ENSG00000245060.6 TPM= 1.75 Transcript Type= lincRNA
chr5	180831027	180835726	180831027	180835726	+	transcript6061.chr5.nnic@LINC00847	transcript6061.chr5.nnic	lincRNA	180831027,180832673,180834312	180831806,180832860,180835726	Gene ID= ENSG00000245060.6 TPM= 2.92 Transcript Type= NA
chr5	180847611	180861272	180847611	180861272	-	transcript6076.chr5.nnic@ZFP62	transcript6076.chr5.nnic	protein_coding	180861219,180860528,180847611	180861272,180860654,180851493	Gene ID= ENSG00000196670.13 TPM= 8.17 Transcript Type= NA
chr5	180909564	180950904	180909564	180950904	+	ENST00000533815.2@BTNL8	ENST00000533815.2	protein_coding	180909564,180911339,180947512,180948355,180948920,180949239,180949904	180909697,180911614,180947625,180948375,180948946,180949265,180950904	Gene ID= ENSG00000113303.11 TPM= 1.17 Transcript Type= protein_coding
chr5	181052806	181061523	181052806	181061523	+	transcript6091.chr5.nnic@BTNL9	transcript6091.chr5.nnic	protein_coding	181052806,181053200,181053469,181054239,181055433,181055989,181058352,181059237	181053099,181053316,181053501,181054259,181055453,181056015,181058378,181061523	Gene ID= ENSG00000165810.16 TPM= 12.84 Transcript Type= NA
chr5	181052934	181061523	181052934	181061523	+	transcript6095.chr5.nnic@BTNL9	transcript6095.chr5.nnic	protein_coding	181052934,181053200,181053469,181054239,181055433,181058352,181059237	181053099,181053316,181053501,181054259,181056015,181058378,181061523	Gene ID= ENSG00000165810.16 TPM= 7.01 Transcript Type= NA
chr5	181052869	181061523	181052869	181061523	+	transcript6099.chr5.nic@BTNL9	transcript6099.chr5.nic	protein_coding	181052869,181053469,181054239,181055433,181055989,181058352,181059237	181053316,181053501,181054259,181055453,181056015,181058378,181061523	Gene ID= ENSG00000165810.16 TPM= 43.2 Transcript Type= NA
chr5	181039778	181052515	181039778	181052515	+	transcript6109.chr5.nic@BTNL9	transcript6109.chr5.nic	protein_coding	181039778,181045467,181047927,181050088	181040432,181045598,181048271,181052515	Gene ID= ENSG00000165810.16 TPM= 4.67 Transcript Type= NA
chr5	181040225	181061523	181040225	181061523	+	ENST00000327705.13@BTNL9	ENST00000327705.13	protein_coding	181040225,181045467,181047927,181050088,181053200,181053469,181054239,181055433,181055989,181058352,181059237	181040432,181045598,181048271,181050369,181053316,181053501,181054259,181055453,181056015,181058378,181061523	Gene ID= ENSG00000165810.16 TPM= 67.72 Transcript Type= protein_coding
chr5	181203118	181205293	181203118	181205293	-	ENST00000334421.5@TRIM7	ENST00000334421.5	protein_coding	181204589,181203118	181205293,181203640	Gene ID= ENSG00000146054.17 TPM= 2.34 Transcript Type= protein_coding
chr5	181193924	181205172	181193924	181205172	-	ENST00000274773.11@TRIM7	ENST00000274773.11	protein_coding	181204589,181203545,181199851,181199095,181198690,181198183,181193924	181205172,181203640,181200081,181199117,181198805,181198218,181195677	Gene ID= ENSG00000146054.17 TPM= 7.01 Transcript Type= protein_coding
chr5	181223290	181235808	181223290	181235808	+	ENST00000351937.9@TRIM41	ENST00000351937.9	protein_coding	181223290,181230744,181232659,181233413,181233636,181234174,181234932,181235354	181224812,181230839,181232889,181233435,181233763,181234349,181234995,181235808	Gene ID= ENSG00000146063.19 TPM= 7.01 Transcript Type= protein_coding
chr5	181236937	181244209	181236937	181244209	-	ENST00000512805.5@RACK1	ENST00000512805.5	protein_coding	181243692,181242174,181241492,181239487,181239067,181238099,181237609,181236937	181244209,181242345,181241639,181239582,181239177,181238239,181237719,181237042	Gene ID= ENSG00000204628.11 TPM= 1192.86 Transcript Type= protein_coding
chr5	181236909	181243916	181236909	181243916	-	ENST00000511473.5@RACK1	ENST00000511473.5	protein_coding	181243680,181242174,181241492,181239487,181239067,181238099,181237609,181236909	181243916,181242345,181241639,181239582,181239177,181238239,181237719,181237042	Gene ID= ENSG00000204628.11 TPM= 33.15 Transcript Type= nonsense_mediated_decay
chr5	181236934	181243880	181236934	181243880	-	ENST00000511566.5@RACK1	ENST00000511566.5	protein_coding	181243692,181242174,181241492,181239487,181239067,181236934	181243880,181242345,181241639,181239582,181239177,181237042	Gene ID= ENSG00000204628.11 TPM= 2.63 Transcript Type= protein_coding
chr5	181236961	181243947	181236961	181243947	-	ENST00000513060.5@RACK1	ENST00000513060.5	protein_coding	181243692,181241492,181239487,181239067,181238099,181237609,181236961	181243947,181242345,181239582,181239177,181238239,181237719,181237042	Gene ID= ENSG00000204628.11 TPM= 6 Transcript Type= retained_intron
chr5	181236937	181243902	181236937	181243902	-	ENST00000508682.5@RACK1	ENST00000508682.5	protein_coding	181243692,181242174,181241492,181240216,181239487,181239067,181238099,181237609,181236937	181243902,181242345,181241639,181240327,181239582,181239177,181238239,181237719,181237042	Gene ID= ENSG00000204628.11 TPM= 5.71 Transcript Type= nonsense_mediated_decay
chr5	181255147	181261138	181255147	181261138	-	transcript6147.chr5.nnic@TRIM52	transcript6147.chr5.nnic	protein_coding	181260001,181255147	181261138,181256515	Gene ID= ENSG00000183718.5 TPM= 4.67 Transcript Type= NA
chr5	181255149	181261735	181255149	181261735	-	transcript6150.chr5.nnic@TRIM52	transcript6150.chr5.nnic	protein_coding	181260001,181255149	181261735,181256649	Gene ID= ENSG00000183718.5 TPM= 2.34 Transcript Type= NA
chr5	181255155	181262046	181255155	181262046	-	transcript6152.chr5.nnic@TRIM52	transcript6152.chr5.nnic	protein_coding	181260001,181255155	181262046,181257228	Gene ID= ENSG00000183718.5 TPM= 3.5 Transcript Type= NA
chr5	181255147	181261118	181255147	181261118	-	ENST00000611618.1@TRIM52	ENST00000611618.1	protein_coding	181260001,181255147	181261118,181257494	Gene ID= ENSG00000183718.5 TPM= 4.67 Transcript Type= protein_coding
chr5	181255146	181261145	181255146	181261145	-	transcript6157.chr5.nnic@NA	transcript6157.chr5.nnic	NA	181255146	181261145	Gene ID= novel_gene_chr5_6158 TPM= 5.84 Transcript Type= NA
chr5	181261212	181264261	181261212	181264261	+	ENST00000514146.1@TRIM52-AS1	ENST00000514146.1	processed_transcript	181261212,181263628	181261384,181264261	Gene ID= ENSG00000248275.1 TPM= 1.17 Transcript Type= lincRNA
chr6	292097	351355	292097	351355	+	ENST00000344450.9@DUSP22	ENST00000344450.9	protein_coding	292097,304628,311880,335114,345854,348103,348769,350822	292560,304661,311962,335163,345928,348274,348841,351355	Gene ID= ENSG00000112679.14 TPM= 25.69 Transcript Type= protein_coding
chr6	292462	351353	292462	351353	+	ENST00000419235.6@DUSP22	ENST00000419235.6	protein_coding	292462,304628,311880,335114,345854,348103,348769	292560,304661,311962,335163,345928,348274,351353	Gene ID= ENSG00000112679.14 TPM= 31.53 Transcript Type= protein_coding
chr6	485133	693137	485133	693137	-	transcript13.chr6.nnic@EXOC2	transcript13.chr6.nnic	protein_coding	693019,689139,637701,632941,629835,619430,617711,610098,599080,598860,598021,592469,576757,572520,564864,564545,564033,562784,556484,555954,555227,553854,549175,532469,499645,497367,491125,488979,485133	693137,689212,637861,633117,629961,619543,617835,610178,599225,598941,598123,592587,576882,572644,564929,564702,564154,562845,556564,556013,555288,553920,549291,532610,499700,497489,491186,489038,486764	Gene ID= ENSG00000112685.13 TPM= 14.01 Transcript Type= NA
chr6	485138	693145	485138	693145	-	transcript14.chr6.nnic@EXOC2	transcript14.chr6.nnic	protein_coding	693019,637701,632941,629835,619430,617711,610098,599080,598860,598021,592469,576757,572520,564864,564545,564033,562784,556484,555954,555227,553854,549175,532469,499645,497367,491125,488979,486634,485138	693145,637861,633117,629961,619543,617835,610178,599225,598941,598123,592587,576882,572644,564929,564702,564154,562845,556564,556013,555288,553920,549291,532610,499700,497489,491186,489038,486764,486403	Gene ID= ENSG00000112685.13 TPM= 4.67 Transcript Type= NA
chr6	485133	693111	485133	693111	-	ENST00000230449.8@EXOC2	ENST00000230449.8	protein_coding	693019,637701,632941,629835,619430,617711,610098,599080,598860,598021,592469,576757,572520,564864,564545,564033,562784,556484,555954,555227,553854,549175,532469,499645,497367,491125,488979,485133	693111,637861,633117,629961,619543,617835,610178,599225,598941,598123,592587,576882,572644,564929,564702,564154,562845,556564,556013,555288,553920,549291,532610,499700,497489,491186,489038,486764	Gene ID= ENSG00000112685.13 TPM= 70.06 Transcript Type= protein_coding
chr6	708592	711405	708592	711405	-	ENST00000606285.1@AL357054.4	ENST00000606285.1	lincRNA	708592	711405	Gene ID= ENSG00000272463.1 TPM= 2.34 Transcript Type= lincRNA
chr6	1312440	1314748	1312440	1314748	+	ENST00000296839.4@FOXQ1	ENST00000296839.4	protein_coding	1312440	1314748	Gene ID= ENSG00000164379.6 TPM= 11.68 Transcript Type= protein_coding
chr6	1389834	1395597	1389834	1395597	+	ENST00000259806.1@FOXF2	ENST00000259806.1	protein_coding	1389834,1394696	1391118,1395597	Gene ID= ENSG00000137273.3 TPM= 46.7 Transcript Type= protein_coding
chr6	1609972	1613897	1609972	1613897	+	ENST00000380874.3@FOXC1	ENST00000380874.3	protein_coding	1609972	1613897	Gene ID= ENSG00000054598.6 TPM= 14.01 Transcript Type= protein_coding
chr6	1623806	2245692	1623806	2245692	-	ENST00000380815.4@GMDS	ENST00000380815.4	protein_coding	2245321,2124687,2117469,2115771,1960774,1959867,1930103,1742468,1726416,1624472,1623806	2245692,2124731,2117556,2115880,1960966,1959971,1930230,1742586,1726512,1624540,1624231	Gene ID= ENSG00000112699.10 TPM= 16.35 Transcript Type= protein_coding
chr6	1909075	2245593	1909075	2245593	-	transcript56.chr6.nnic@GMDS	transcript56.chr6.nnic	protein_coding	2245321,2124687,2117469,2115771,1960774,1959867,1930103,1909075	2245593,2124731,2117556,2115880,1960966,1959971,1930230,1909987	Gene ID= ENSG00000112699.10 TPM= 2.34 Transcript Type= NA
chr6	2765410	2785745	2765410	2785745	+	transcript95.chr6.nnic@WRNIP1	transcript95.chr6.nnic	protein_coding	2765410,2779263,2783406,2784324,2785007	2766444,2779492,2783561,2784403,2785745	Gene ID= ENSG00000124535.15 TPM= 10.51 Transcript Type= NA
chr6	2765414	2785745	2765414	2785745	+	ENST00000380771.8@WRNIP1	ENST00000380771.8	protein_coding	2765414,2768691,2770195,2779263,2783406,2784324,2785007	2766444,2768882,2770361,2779492,2783561,2784403,2785745	Gene ID= ENSG00000124535.15 TPM= 12.84 Transcript Type= protein_coding
chr6	2832332	2842006	2832332	2842006	-	ENST00000380739.5@SERPINB1	ENST00000380739.5	protein_coding	2841812,2840419,2838549,2837882,2836108,2835856,2832332	2842006,2840594,2838686,2837999,2836250,2836023,2834012	Gene ID= ENSG00000021355.12 TPM= 59.55 Transcript Type= protein_coding
chr6	2887266	2903280	2887266	2903280	-	ENST00000380698.4@SERPINB9	ENST00000380698.4	protein_coding	2903201,2900444,2896053,2895391,2893411,2891833,2887266	2903280,2900621,2896190,2895508,2893553,2891988,2890570	Gene ID= ENSG00000170542.5 TPM= 12.84 Transcript Type= protein_coding
chr6	2948160	2972165	2948160	2972165	-	ENST00000616722.3@SERPINB6	ENST00000616722.3	protein_coding	2971533,2968779,2959168,2955524,2954592,2953044,2948914,2948160	2972165,2968913,2959342,2955670,2954709,2953186,2949069,2948699	Gene ID= ENSG00000124570.17 TPM= 9.81 Transcript Type= protein_coding
chr6	2948160	2971594	2948160	2971594	-	transcript123.chr6.nic@SERPINB6	transcript123.chr6.nic	protein_coding	2968779,2959168,2955524,2954592,2953044,2948914,2948160	2971594,2959342,2955670,2954709,2953186,2949069,2948699	Gene ID= ENSG00000124570.17 TPM= 16.72 Transcript Type= NA
chr6	2948160	2971283	2948160	2971283	-	transcript125.chr6.nnic@SERPINB6	transcript125.chr6.nnic	protein_coding	2970696,2959168,2955524,2954592,2953044,2948914,2948160	2971283,2959342,2955670,2954709,2953186,2949069,2948699	Gene ID= ENSG00000124570.17 TPM= 8.35 Transcript Type= NA
chr6	2948159	2971305	2948159	2971305	-	ENST00000380539.5@SERPINB6	ENST00000380539.5	protein_coding	2971248,2959168,2955524,2954592,2953044,2948914,2948159	2971305,2959342,2955670,2954709,2953186,2949069,2948699	Gene ID= ENSG00000124570.17 TPM= 28.98 Transcript Type= protein_coding
chr6	2948159	2971585	2948159	2971585	-	ENST00000380546.7@SERPINB6	ENST00000380546.7	protein_coding	2971491,2959168,2955524,2954592,2953044,2948914,2948159	2971585,2959342,2955670,2954709,2953186,2949069,2948699	Gene ID= ENSG00000124570.17 TPM= 19.64 Transcript Type= protein_coding
chr6	2948159	2971206	2948159	2971206	-	ENST00000380529.5@SERPINB6	ENST00000380529.5	protein_coding	2971117,2959168,2955524,2954592,2953044,2948914,2948159	2971206,2959342,2955670,2954709,2953186,2949069,2948699	Gene ID= ENSG00000124570.17 TPM= 4.46 Transcript Type= protein_coding
chr6	2965795	2970075	2965795	2970075	+	transcript136.chr6.nnic@NA	transcript136.chr6.nnic	NA	2965795	2970075	Gene ID= novel_gene_chr6_137 TPM= 29.97 Transcript Type= NA
chr6	2988648	2991173	2988648	2991173	+	ENST00000605901.1@LINC01011	ENST00000605901.1	lincRNA	2988648,2989528,2989869	2988709,2989733,2991173	Gene ID= ENSG00000244041.7 TPM= 2.34 Transcript Type= lincRNA
chr6	2999848	3019755	2999848	3019755	+	transcript147.chr6.nic@NQO2	transcript147.chr6.nic	protein_coding	2999848,3004495,3006468,3010025,3012544,3015530,3016884,3019479	3000085,3004651,3006559,3010189,3012674,3015643,3016985,3019755	Gene ID= ENSG00000124588.19 TPM= 3.5 Transcript Type= NA
chr6	3063967	3115187	3063967	3115187	+	transcript164.chr6.nnic@RIPK1	transcript164.chr6.nnic	protein_coding	3063967,3076764,3077779,3080979,3083085,3085259,3089581,3104225,3105482,3110803,3113053	3064059,3076987,3077935,3081116,3083313,3085408,3089657,3104315,3106051,3110955,3115187	Gene ID= ENSG00000137275.13 TPM= 16.35 Transcript Type= NA
chr6	3118692	3153578	3118692	3153578	+	ENST00000380379.9@BPHL	ENST00000380379.9	protein_coding	3118692,3123657,3127242,3129045,3137362,3140386,3152488	3118847,3123760,3127408,3129198,3137493,3140509,3153578	Gene ID= ENSG00000137274.12 TPM= 2.34 Transcript Type= protein_coding
chr6	3153669	3157526	3153669	3157526	-	ENST00000333628.3@TUBB2A	ENST00000333628.3	protein_coding	3157407,3156044,3155625,3153669	3157526,3156152,3155735,3154923	Gene ID= ENSG00000137267.5 TPM= 26.85 Transcript Type= protein_coding
chr6	3224261	3227735	3224261	3227735	-	ENST00000259818.7@TUBB2B	ENST00000259818.7	protein_coding	3227487,3226561,3226159,3224261	3227735,3226669,3226269,3225811	Gene ID= ENSG00000137285.9 TPM= 1.17 Transcript Type= protein_coding
chr6	3258894	3268049	3258894	3268049	+	ENST00000438998.6@PSMG4	ENST00000438998.6	protein_coding	3258894,3263684,3267591	3259196,3263759,3268049	Gene ID= ENSG00000180822.11 TPM= 9.34 Transcript Type= protein_coding
chr6	3258952	3267781	3258952	3267781	+	ENST00000419065.6@PSMG4	ENST00000419065.6	protein_coding	3258952,3263684,3264209,3267591	3259196,3263759,3264325,3267781	Gene ID= ENSG00000180822.11 TPM= 3.5 Transcript Type= protein_coding
chr6	3260293	3263706	3260293	3263706	-	transcript206.chr6.nnic@NA	transcript206.chr6.nnic	NA	3260293	3263706	Gene ID= novel_gene_chr6_207 TPM= 58.38 Transcript Type= NA
chr6	3268962	3457022	3268962	3457022	-	ENST00000436008.6@SLC22A23	ENST00000436008.6	protein_coding	3455906,3415752,3410188,3323834,3298091,3289764,3286859,3285079,3284936,3283852,3268962	3457022,3415855,3410342,3324002,3298218,3289866,3287091,3285111,3284959,3283975,3273412	Gene ID= ENSG00000137266.14 TPM= 49.04 Transcript Type= protein_coding
chr6	3722620	3752026	3722620	3752026	-	ENST00000380283.4@PXDC1	ENST00000380283.4	protein_coding	3751276,3738057,3737079,3727551,3722620	3752026,3738148,3737196,3727662,3723736	Gene ID= ENSG00000168994.13 TPM= 173.59 Transcript Type= protein_coding
chr6	3750705	3753015	3750705	3753015	+	transcript221.chr6.nnic@NA	transcript221.chr6.nnic	NA	3750705	3753015	Gene ID= novel_gene_chr6_222 TPM= 7.01 Transcript Type= NA
chr6	3849386	3851317	3849386	3851317	+	ENST00000380274.1@FAM50B	ENST00000380274.1	protein_coding	3849386	3851317	Gene ID= ENSG00000145945.5 TPM= 8.76 Transcript Type= protein_coding
chr6	3849388	3851317	3849388	3851317	+	ENST00000380272.3@FAM50B	ENST00000380272.3	protein_coding	3849388,3849789	3849486,3851317	Gene ID= ENSG00000145945.5 TPM= 33.28 Transcript Type= protein_coding
chr6	4021281	4064983	4021281	4064983	+	transcript227.chr6.nic@PRPF4B	transcript227.chr6.nic	protein_coding	4021281,4031559,4037397,4040772,4042487,4043813,4047175,4049016,4049732,4051957,4052720,4056321,4057036,4058728,4060413,4061015,4061655,4062213,4062557,4063074,4064801	4021466,4032755,4037570,4040927,4042568,4044023,4047248,4049106,4049879,4052094,4052873,4056435,4057187,4058814,4060686,4061147,4061700,4062299,4062633,4063119,4064983	Gene ID= ENSG00000112739.16 TPM= 10.74 Transcript Type= NA
chr6	4021281	4064983	4021281	4064983	+	transcript229.chr6.nic@PRPF4B	transcript229.chr6.nic	protein_coding	4021281,4031559,4037397,4040772,4042487,4043813,4047175,4049016,4049732,4051957,4052720,4056321,4057036,4058728,4060413,4061015,4061655,4062213,4063074,4064801	4021466,4032755,4037570,4040927,4042568,4044023,4047248,4049106,4049879,4052094,4052873,4056435,4057187,4058814,4060686,4061147,4061700,4062299,4063119,4064983	Gene ID= ENSG00000112739.16 TPM= 3.15 Transcript Type= NA
chr6	4021281	4064983	4021281	4064983	+	transcript230.chr6.nic@PRPF4B	transcript230.chr6.nic	protein_coding	4021281,4031559,4037397,4040772,4042487,4043813,4047175,4049016,4049732,4051957,4052720,4056321,4057036,4058728,4060413,4061015,4061655,4062557,4063074,4064801	4021466,4032755,4037570,4040927,4042568,4044023,4047248,4049106,4049879,4052094,4052873,4056435,4057187,4058814,4060686,4061147,4062299,4062633,4063119,4064983	Gene ID= ENSG00000112739.16 TPM= 4.9 Transcript Type= NA
chr6	4021267	4064982	4021267	4064982	+	ENST00000480058.5@PRPF4B	ENST00000480058.5	protein_coding	4021267,4031559,4037397,4040772,4042487,4043813,4047175,4049016,4049732,4051957,4052720,4056321,4057036,4058728,4060413,4063074	4021466,4032755,4037570,4040927,4042568,4044023,4047248,4049106,4049879,4052094,4052873,4056435,4057187,4058814,4062299,4064982	Gene ID= ENSG00000112739.16 TPM= 6.66 Transcript Type= nonsense_mediated_decay
chr6	4021326	4061907	4021326	4061907	+	ENST00000337659.10@PRPF4B	ENST00000337659.10	protein_coding	4021326,4031559,4037397,4040772,4042487,4043813,4047175,4049016,4049732,4051957,4052720,4056321,4057036,4058728,4060413	4021466,4032755,4037570,4040927,4042568,4044023,4047248,4049106,4049879,4052094,4052873,4056435,4057187,4058814,4061907	Gene ID= ENSG00000112739.16 TPM= 48.1 Transcript Type= protein_coding
chr6	4115706	4135597	4115706	4135597	-	ENST00000361538.6@ECI2	ENST00000361538.6	protein_coding	4135511,4133549,4130767,4130372,4127762,4126135,4125250,4119186,4117308,4115706	4135597,4133701,4130865,4130560,4127831,4126237,4125370,4119275,4117451,4116029	Gene ID= ENSG00000198721.12 TPM= 17.51 Transcript Type= protein_coding
chr6	4115689	4135597	4115689	4135597	-	ENST00000380118.7@ECI2	ENST00000380118.7	protein_coding	4135511,4133549,4130767,4130372,4127762,4126135,4125250,4119186,4117308,4115689	4135597,4133711,4130865,4130560,4127831,4126237,4125370,4119275,4117451,4116029	Gene ID= ENSG00000198721.12 TPM= 8.17 Transcript Type= protein_coding
chr6	4115700	4135591	4115700	4135591	-	ENST00000496241.6@ECI2	ENST00000496241.6	protein_coding	4135511,4133549,4130767,4130372,4130179,4127762,4126135,4125250,4119186,4117308,4115700	4135591,4133701,4130865,4130560,4130249,4127831,4126237,4125370,4119275,4117451,4116029	Gene ID= ENSG00000198721.12 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr6	4776410	4893710	4776410	4893710	+	transcript255.chr6.nic@CDYL	transcript255.chr6.nic	protein_coding	4776410,4891713	4776807,4893710	Gene ID= ENSG00000153046.17 TPM= 2.34 Transcript Type= NA
chr6	4776435	4954256	4776435	4954256	+	ENST00000397588.7@CDYL	ENST00000397588.7	protein_coding	4776435,4891713,4935515,4937565,4943546,4952266,4953898	4776807,4892379,4935771,4937737,4943756,4952409,4954256	Gene ID= ENSG00000153046.17 TPM= 10.51 Transcript Type= protein_coding
chr6	4995049	5004063	4995049	5004063	-	ENST00000618533.4@RPP40	ENST00000618533.4	protein_coding	5003880,5002101,5000563,4999809,4996222,4995951,4995049	5004063,5002245,5000631,4999904,4996420,4996085,4995276	Gene ID= ENSG00000124787.13 TPM= 1.17 Transcript Type= protein_coding
chr6	5186600	5260737	5186600	5260737	-	ENST00000500576.4@LYRM4	ENST00000500576.4	protein_coding	5260648,5216618,5186600	5260737,5216738,5186980	Gene ID= ENSG00000214113.10 TPM= 1.17 Transcript Type= protein_coding
chr6	5261526	5771580	5261526	5771580	+	ENST00000274680.8@FARS2	ENST00000274680.8	protein_coding	5261526,5368550,5404542,5431041,5545180,5613169,5771291	5261660,5369182,5404701,5431172,5545340,5613320,5771580	Gene ID= ENSG00000145982.11 TPM= 23.35 Transcript Type= protein_coding
chr6	5998002	6007605	5998002	6007605	-	ENST00000616243.1@NRN1	ENST00000616243.1	protein_coding	6007487,6006695,6002353,5998002	6007605,6006783,6002497,5999204	Gene ID= ENSG00000124785.8 TPM= 2.34 Transcript Type= protein_coding
chr6	5997999	6004080	5997999	6004080	-	transcript291.chr6.nic@NRN1	transcript291.chr6.nic	protein_coding	6003169,6002353,5997999	6004080,6002497,5999204	Gene ID= ENSG00000124785.8 TPM= 7.01 Transcript Type= NA
chr6	5997999	6004035	5997999	6004035	-	transcript292.chr6.nnic@NRN1	transcript292.chr6.nnic	protein_coding	6003703,6002353,5997999	6004035,6002497,5999204	Gene ID= ENSG00000124785.8 TPM= 4.67 Transcript Type= NA
chr6	5997999	6004059	5997999	6004059	-	transcript294.chr6.nic@NRN1	transcript294.chr6.nic	protein_coding	6002353,5997999	6004059,5999204	Gene ID= ENSG00000124785.8 TPM= 4.67 Transcript Type= NA
chr6	6000723	6004080	6000723	6004080	-	transcript295.chr6.nic@NRN1	transcript295.chr6.nic	protein_coding	6003169,6000723	6004080,6002497	Gene ID= ENSG00000124785.8 TPM= 2.34 Transcript Type= NA
chr6	5997999	6006967	5997999	6006967	-	ENST00000244766.6@NRN1	ENST00000244766.6	protein_coding	6006695,6002353,5997999	6006967,6002497,5999204	Gene ID= ENSG00000124785.8 TPM= 29.19 Transcript Type= protein_coding
chr6	6144085	6320834	6144085	6320834	-	ENST00000264870.7@F13A1	ENST00000264870.7	protein_coding	6320587,6318535,6305351,6266558,6250811,6248312,6224686,6222033,6197223,6195797,6181988,6174580,6167458,6151813,6144085	6320834,6318682,6305539,6266809,6250929,6248419,6224860,6222171,6197326,6195885,6182141,6174867,6167618,6151949,6145772	Gene ID= ENSG00000124491.15 TPM= 260.37 Transcript Type= protein_coding
chr6	6305113	6320642	6305113	6320642	-	ENST00000451619.1@F13A1	ENST00000451619.1	protein_coding	6320587,6318535,6305113	6320642,6318682,6305539	Gene ID= ENSG00000124491.15 TPM= 1.17 Transcript Type= protein_coding
chr6	7107808	7251980	7107808	7251980	+	ENST00000379938.6@RREB1	ENST00000379938.6	protein_coding	7107808,7176655,7181124,7181870,7187434,7189159,7210804,7211573,7226467,7228997,7240438,7246424,7248511	7108060,7176773,7181246,7182082,7187523,7189322,7210948,7211709,7226656,7231907,7240602,7247221,7251980	Gene ID= ENSG00000124782.19 TPM= 21.6 Transcript Type= protein_coding
chr6	7231130	7251980	7231130	7251980	+	transcript311.chr6.nic@RREB1	transcript311.chr6.nic	protein_coding	7231130,7246424,7248511	7231907,7247221,7251980	Gene ID= ENSG00000124782.19 TPM= 27.44 Transcript Type= NA
chr6	7123164	7126307	7123164	7126307	-	transcript315.chr6.nnic@NA	transcript315.chr6.nnic	NA	7123164	7126307	Gene ID= novel_gene_chr6_316 TPM= 2.34 Transcript Type= NA
chr6	7237387	7242384	7237387	7242384	-	transcript317.chr6.nnic@NA	transcript317.chr6.nnic	NA	7237387	7242384	Gene ID= novel_gene_chr6_318 TPM= 4.67 Transcript Type= NA
chr6	7242868	7243903	7242868	7243903	+	transcript313.chr6.nnic@NA	transcript313.chr6.nnic	NA	7242868	7243903	Gene ID= novel_gene_chr6_314 TPM= 2.34 Transcript Type= NA
chr6	7268306	7313207	7268306	7313207	-	ENST00000474597.5@SSR1	ENST00000474597.5	protein_coding	7313042,7309917,7303550,7301310,7298747,7297923,7295392,7295088,7289868,7268306	7313207,7310029,7303637,7301572,7298823,7298001,7295485,7295102,7289931,7269154	Gene ID= ENSG00000124783.12 TPM= 3.5 Transcript Type= protein_coding
chr6	7281143	7313207	7281143	7313207	-	ENST00000244763.8@SSR1	ENST00000244763.8	protein_coding	7313042,7309917,7303550,7301310,7298747,7297923,7295392,7281143	7313207,7310029,7303637,7301572,7298823,7298001,7295485,7289931	Gene ID= ENSG00000124783.12 TPM= 46.7 Transcript Type= protein_coding
chr6	7287570	7313198	7287570	7313198	-	ENST00000397511.6@SSR1	ENST00000397511.6	protein_coding	7313042,7309917,7303550,7301310,7298747,7297923,7295392,7295088,7287570	7313198,7310029,7303637,7301572,7298823,7298001,7295485,7295102,7289931	Gene ID= ENSG00000124783.12 TPM= 79.4 Transcript Type= protein_coding
chr6	7289676	7313182	7289676	7313182	-	ENST00000479365.5@SSR1	ENST00000479365.5	protein_coding	7313042,7309917,7303550,7301310,7298747,7297923,7295385,7289676	7313182,7310029,7303637,7301572,7298823,7298001,7295485,7289931	Gene ID= ENSG00000124783.12 TPM= 3.5 Transcript Type= protein_coding
chr6	7389794	7417900	7389794	7417900	+	transcript345.chr6.nic@RIOK1	transcript345.chr6.nic	protein_coding	7389794,7393099,7395021,7396703,7398698,7400958,7402603,7402817,7403941,7404418,7404918,7405249,7410386,7411332,7412889,7414238,7417331	7390073,7393303,7395143,7396772,7398740,7401050,7402715,7402897,7404027,7404555,7405021,7405355,7410451,7411451,7412942,7414390,7417900	Gene ID= ENSG00000124784.8 TPM= 2.34 Transcript Type= NA
chr6	7389496	7418037	7389496	7418037	+	ENST00000379834.6@RIOK1	ENST00000379834.6	protein_coding	7389496,7393099,7395053,7396703,7398698,7400958,7402603,7402817,7403941,7404418,7404918,7405249,7410386,7411332,7412889,7414238,7417331	7390073,7393303,7395143,7396772,7398740,7401050,7402715,7402897,7404027,7404555,7405021,7405355,7410451,7411451,7412942,7414390,7418037	Gene ID= ENSG00000124784.8 TPM= 16.35 Transcript Type= protein_coding
chr6	7389794	7418037	7389794	7418037	+	transcript354.chr6.nic@RIOK1	transcript354.chr6.nic	protein_coding	7389794,7393099,7395053,7396703,7398698,7400958,7402603,7403941,7404418,7404918,7405249,7410386,7411332,7412889,7414238,7417331	7390073,7393303,7395143,7396772,7398740,7401050,7402897,7404027,7404555,7405021,7405355,7410451,7411451,7412942,7414390,7418037	Gene ID= ENSG00000124784.8 TPM= 2.34 Transcript Type= NA
chr6	7541575	7586717	7541575	7586717	+	ENST00000379802.7@DSP	ENST00000379802.7	protein_coding	7541575,7555718,7558116,7559226,7562652,7563736,7565359,7566377,7567354,7567781,7568437,7569186,7570437,7571383,7571842,7574086,7574657,7575295,7576294,7576959,7577779,7578464,7579275,7582642	7542085,7555820,7558264,7559400,7562780,7563786,7565520,7566481,7567449,7567906,7568589,7569340,7570563,7571584,7572068,7574252,7574795,7575488,7576456,7577042,7577886,7578562,7581569,7586717	Gene ID= ENSG00000096696.13 TPM= 10.51 Transcript Type= protein_coding
chr6	7590199	7611967	7590199	7611967	+	ENST00000342415.5@SNRNP48	ENST00000342415.5	protein_coding	7590199,7593734,7594099,7595027,7601336,7602623,7605398,7606031,7608825	7590413,7593847,7594159,7595101,7601524,7602744,7605486,7606195,7611967	Gene ID= ENSG00000168566.12 TPM= 4.67 Transcript Type= protein_coding
chr6	7881517	7910814	7881517	7910814	-	ENST00000379757.8@TXNDC5	ENST00000379757.8	protein_coding	7910514,7904574,7899576,7895106,7891621,7889495,7888705,7885961,7884359,7881517	7910814,7904723,7899681,7895202,7891736,7889581,7888848,7886043,7884488,7883266	Gene ID= ENSG00000239264.8 TPM= 418 Transcript Type= protein_coding
chr6	8013567	8064414	8013567	8064414	-	ENST00000397457.6@BLOC1S5	ENST00000397457.6	protein_coding	8064265,8062534,8041139,8026367,8013567	8064414,8062616,8041268,8026425,8015828	Gene ID= ENSG00000188428.19 TPM= 3.5 Transcript Type= protein_coding
chr6	8073360	8102548	8073360	8102548	-	ENST00000429723.6@EEF1E1	ENST00000429723.6	protein_coding	8102435,8097267,8090186,8073360	8102548,8097467,8090281,8073510	Gene ID= ENSG00000124802.11 TPM= 1.17 Transcript Type= protein_coding
chr6	8079395	8102578	8079395	8102578	-	ENST00000379715.9@EEF1E1	ENST00000379715.9	protein_coding	8102435,8097267,8090186,8079395	8102578,8097467,8090281,8080030	Gene ID= ENSG00000124802.11 TPM= 3.5 Transcript Type= protein_coding
chr6	8089954	8102559	8089954	8102559	-	ENST00000507463.1@EEF1E1	ENST00000507463.1	protein_coding	8102435,8097267,8089954	8102559,8097467,8090281	Gene ID= ENSG00000124802.11 TPM= 3.5 Transcript Type= protein_coding
chr6	8413068	8435567	8413068	8435567	-	transcript405.chr6.nnic@SLC35B3	transcript405.chr6.nnic	protein_coding	8435343,8434385,8429864,8427937,8422470,8420721,8419580,8417402,8416884,8414908,8413068	8435567,8434430,8430157,8428058,8422624,8420828,8419677,8417494,8416995,8414977,8413699	Gene ID= ENSG00000124786.9 TPM= 10.51 Transcript Type= NA
chr6	8413068	8435531	8413068	8435531	-	transcript406.chr6.nnic@SLC35B3	transcript406.chr6.nnic	protein_coding	8435439,8434385,8429864,8427937,8422470,8420721,8419580,8417402,8416884,8414908,8413068	8435531,8434430,8430157,8428058,8422624,8420828,8419677,8417494,8416995,8414977,8413699	Gene ID= ENSG00000124786.9 TPM= 2.34 Transcript Type= NA
chr6	8413068	8435551	8413068	8435551	-	transcript407.chr6.nnic@SLC35B3	transcript407.chr6.nnic	protein_coding	8435343,8429864,8427937,8422470,8420721,8419580,8417402,8416884,8414908,8413068	8435551,8430157,8428058,8422624,8420828,8419677,8417494,8416995,8414977,8413699	Gene ID= ENSG00000124786.9 TPM= 5.84 Transcript Type= NA
chr6	10396677	10415248	10396677	10415248	-	ENST00000379613.7@TFAP2A	ENST00000379613.7	protein_coding	10414941,10409901,10406793,10404508,10402492,10400448,10396677	10415248,10410335,10406844,10404739,10402610,10400589,10398705	Gene ID= ENSG00000137203.10 TPM= 2.34 Transcript Type= protein_coding
chr6	10521332	10629367	10521332	10629367	+	ENST00000397423.6@GCNT2	ENST00000397423.6	protein_coding	10521332,10527474,10528631,10621351,10626417	10521417,10527660,10528841,10621443,10629367	Gene ID= ENSG00000111846.16 TPM= 2.04 Transcript Type= processed_transcript
chr6	10521352	10629368	10521352	10629368	+	transcript426.chr6.nnic@GCNT2	transcript426.chr6.nnic	protein_coding	10521352,10621351,10626417	10521417,10621443,10629368	Gene ID= ENSG00000111846.16 TPM= 3.21 Transcript Type= NA
chr6	10528356	10629367	10528356	10629367	+	ENST00000379597.7@GCNT2	ENST00000379597.7	protein_coding	10528356,10621351,10626417	10529836,10621443,10629367	Gene ID= ENSG00000111846.16 TPM= 4.38 Transcript Type= protein_coding
chr6	10556007	10629368	10556007	10629368	+	ENST00000316170.7@GCNT2	ENST00000316170.7	protein_coding	10556007,10621351,10626417	10557342,10621443,10629368	Gene ID= ENSG00000111846.16 TPM= 2.04 Transcript Type= protein_coding
chr6	10544546	10546649	10544546	10546649	-	transcript430.chr6.nnic@NA	transcript430.chr6.nnic	NA	10544546	10546649	Gene ID= novel_gene_chr6_431 TPM= 5.84 Transcript Type= NA
chr6	10694695	10709782	10694695	10709782	+	ENST00000379568.3@PAK1IP1	ENST00000379568.3	protein_coding	10694695,10697324,10702369,10702565,10703405,10704507,10704747,10707415,10708953,10709238	10695069,10697486,10702489,10702639,10703457,10704652,10704844,10707514,10709076,10709782	Gene ID= ENSG00000111845.4 TPM= 37.36 Transcript Type= protein_coding
chr6	10722975	10731129	10722975	10731129	+	ENST00000229563.5@TMEM14C	ENST00000229563.5	protein_coding	10722975,10724570,10724961,10725907,10728640,10730615	10723241,10724633,10725037,10726008,10728727,10731129	Gene ID= ENSG00000111843.13 TPM= 74.73 Transcript Type= protein_coding
chr6	10747759	10756981	10747759	10756981	+	ENST00000379542.9@TMEM14B	ENST00000379542.9	protein_coding	10747759,10749202,10749622,10751133,10755142,10756467	10747881,10749268,10749698,10751234,10755232,10756981	Gene ID= ENSG00000137210.13 TPM= 53.71 Transcript Type= protein_coding
chr6	10747811	10756947	10747811	10756947	+	ENST00000379530.7@TMEM14B	ENST00000379530.7	protein_coding	10747811,10749202,10749622,10755142,10756467	10747881,10749268,10749698,10755232,10756947	Gene ID= ENSG00000137210.13 TPM= 2.34 Transcript Type= protein_coding
chr6	11180257	11183732	11180257	11183732	-	transcript477.chr6.nnic@NA	transcript477.chr6.nnic	NA	11180257	11183732	Gene ID= novel_gene_chr6_478 TPM= 5.84 Transcript Type= NA
chr6	11183298	11232682	11183298	11232682	-	ENST00000379446.9@NEDD9	ENST00000379446.9	protein_coding	11232504,11213281,11193591,11192345,11189964,11188218,11183298	11232682,11213727,11193692,11192446,11191205,11188307,11185671	Gene ID= ENSG00000111859.16 TPM= 210.17 Transcript Type= protein_coding
chr6	11200080	11203986	11200080	11203986	+	transcript469.chr6.nnic@NA	transcript469.chr6.nnic	NA	11200080	11203986	Gene ID= novel_gene_chr6_470 TPM= 2.34 Transcript Type= NA
chr6	11218915	11223494	11218915	11223494	+	transcript473.chr6.nnic@NA	transcript473.chr6.nnic	NA	11218915	11223494	Gene ID= novel_gene_chr6_474 TPM= 5.84 Transcript Type= NA
chr6	11228102	11232610	11228102	11232610	+	transcript475.chr6.nnic@NA	transcript475.chr6.nnic	NA	11228102	11232610	Gene ID= novel_gene_chr6_476 TPM= 4.67 Transcript Type= NA
chr6	11711621	11778762	11711621	11778762	-	transcript497.chr6.nnic@ADTRP	transcript497.chr6.nnic	protein_coding	11778607,11768249,11766274,11735568,11723349,11712981,11711621	11778762,11768383,11766375,11735683,11723500,11714512,11712234	Gene ID= ENSG00000111863.12 TPM= 2.34 Transcript Type= NA
chr6	11713524	11779170	11713524	11779170	-	ENST00000414691.7@ADTRP	ENST00000414691.7	protein_coding	11778607,11768249,11766274,11735568,11723349,11713524	11779170,11768383,11766375,11735683,11723500,11714512	Gene ID= ENSG00000111863.12 TPM= 2.34 Transcript Type= protein_coding
chr6	12012338	12164999	12012338	12164999	+	ENST00000379388.6@HIVEP1	ENST00000379388.6	protein_coding	12012338,12015526,12089184,12119890,12129759,12130767,12135791,12161439,12163283	12012566,12015668,12089237,12125870,12129892,12130942,12135892,12161929,12164999	Gene ID= ENSG00000095951.16 TPM= 4.67 Transcript Type= protein_coding
chr6	12290363	12297194	12290363	12297194	+	ENST00000379375.5@EDN1	ENST00000379375.5	protein_coding	12290363,12292341,12293941,12294261,12295962	12290693,12292509,12294096,12294404,12297194	Gene ID= ENSG00000078401.6 TPM= 9.34 Transcript Type= protein_coding
chr6	12514110	12514724	12514110	12514724	+	ENST00000391491.2@RPL15P3	ENST00000391491.2	processed_pseudogene	12514110	12514724	Gene ID= ENSG00000212802.4 TPM= 46.7 Transcript Type= processed_pseudogene
chr6	12957790	13290484	12957790	13290484	+	transcript510.chr6.nnic@PHACTR1	transcript510.chr6.nnic	protein_coding	12957790,13053365,13160204,13182519,13184799,13205815,13227816,13230037,13272860,13278268,13283422,13286146,13287063	12958037,13053529,13160284,13182686,13185005,13206136,13228063,13230193,13272915,13278329,13283562,13286222,13290484	Gene ID= ENSG00000112137.17 TPM= 217.17 Transcript Type= NA
chr6	13272672	13287481	13272672	13287481	+	ENST00000379335.7@PHACTR1	ENST00000379335.7	protein_coding	13272672,13278268,13283422,13286146,13287063	13272915,13278329,13283562,13286222,13287481	Gene ID= ENSG00000112137.17 TPM= 3.5 Transcript Type= protein_coding
chr6	13016634	13019312	13016634	13019312	-	transcript540.chr6.nnic@NA	transcript540.chr6.nnic	NA	13016634	13019312	Gene ID= novel_gene_chr6_541 TPM= 2.34 Transcript Type= NA
chr6	13190200	13193019	13190200	13193019	-	transcript538.chr6.nnic@NA	transcript538.chr6.nnic	NA	13190200	13193019	Gene ID= novel_gene_chr6_539 TPM= 4.67 Transcript Type= NA
chr6	13304951	13328531	13304951	13328531	-	ENST00000379300.7@TBC1D7	ENST00000379300.7	protein_coding	13328296,13326787,13325094,13320908,13316571,13307600,13306398,13304951	13328531,13326906,13325174,13321095,13316708,13307745,13306527,13305187	Gene ID= ENSG00000145979.17 TPM= 4.67 Transcript Type= protein_coding
chr6	13304951	13328544	13304951	13328544	-	transcript522.chr6.nnic@TBC1D7	transcript522.chr6.nnic	protein_coding	13328316,13326787,13325094,13320908,13316571,13307600,13306398,13304951	13328544,13326963,13325174,13321095,13316708,13307745,13306527,13305187	Gene ID= ENSG00000145979.17 TPM= 3.5 Transcript Type= NA
chr6	13304951	13328531	13304951	13328531	-	transcript523.chr6.nic@TBC1D7	transcript523.chr6.nic	protein_coding	13328456,13326787,13325094,13320908,13316571,13307600,13306398,13304951	13328531,13326963,13325174,13321095,13316708,13307745,13306527,13305187	Gene ID= ENSG00000145979.17 TPM= 2.34 Transcript Type= NA
chr6	13304954	13328583	13304954	13328583	-	ENST00000379307.6@TBC1D7	ENST00000379307.6	protein_coding	13328456,13326787,13320908,13316571,13307600,13306398,13304954	13328583,13326906,13321095,13316708,13307745,13306527,13305187	Gene ID= ENSG00000145979.17 TPM= 4.67 Transcript Type= protein_coding
chr6	13304951	13328531	13304951	13328531	-	ENST00000356436.8@TBC1D7	ENST00000356436.8	protein_coding	13328456,13326787,13325094,13320908,13316571,13307600,13306398,13304951	13328531,13326906,13325174,13321095,13316708,13307745,13306527,13305187	Gene ID= ENSG00000145979.17 TPM= 11.68 Transcript Type= protein_coding
chr6	13279033	13282442	13279033	13282442	-	transcript542.chr6.nnic@NA	transcript542.chr6.nnic	NA	13279033	13282442	Gene ID= novel_gene_chr6_543 TPM= 3.5 Transcript Type= NA
chr6	13309365	13310650	13309365	13310650	+	transcript536.chr6.nnic@NA	transcript536.chr6.nnic	NA	13309365	13310650	Gene ID= novel_gene_chr6_537 TPM= 3.5 Transcript Type= NA
chr6	13314335	13316560	13314335	13316560	+	transcript534.chr6.nnic@NA	transcript534.chr6.nnic	NA	13314335	13316560	Gene ID= novel_gene_chr6_535 TPM= 2.34 Transcript Type= NA
chr6	13469268	13487662	13469268	13487662	-	ENST00000603223.1@GFOD1	ENST00000603223.1	protein_coding	13486638,13469268	13487662,13470630	Gene ID= ENSG00000145990.10 TPM= 5.84 Transcript Type= protein_coding
chr6	13574277	13612173	13574277	13612173	+	transcript552.chr6.nnic@SIRT5	transcript552.chr6.nnic	protein_coding	13574277,13579451,13584076,13588331,13591669,13595477,13596963,13599032,13600834,13611790	13574306,13579609,13584225,13588464,13591894,13595564,13597016,13599155,13600949,13612173	Gene ID= ENSG00000124523.15 TPM= 2.34 Transcript Type= NA
chr6	13574537	13614558	13574537	13614558	+	transcript556.chr6.nic@SIRT5	transcript556.chr6.nic	protein_coding	13574537,13579451,13584076,13588331,13591669,13595477,13596963,13599032,13600834,13611790	13574624,13579609,13584225,13588464,13591894,13595564,13597016,13599155,13600949,13614558	Gene ID= ENSG00000124523.15 TPM= 5.84 Transcript Type= NA
chr6	13615327	13621205	13615327	13621205	+	ENST00000451315.6@NOL7	ENST00000451315.6	protein_coding	13615327,13615712,13616463,13617770,13618058,13620208,13620408,13620754	13615624,13615772,13616521,13617801,13618139,13620329,13620485,13621205	Gene ID= ENSG00000225921.6 TPM= 18.68 Transcript Type= protein_coding
chr6	13621498	13710908	13621498	13710908	-	transcript566.chr6.nnic@RANBP9	transcript566.chr6.nnic	protein_coding	13710729,13696785,13658780,13657109,13652659,13644545,13642479,13641199,13639563,13637808,13634431,13632370,13625653,13621498	13710908,13696896,13658832,13657276,13652681,13644729,13642591,13641307,13639753,13637955,13634552,13632521,13625764,13622492	Gene ID= ENSG00000010017.12 TPM= 3.5 Transcript Type= NA
chr6	13695402	13711854	13695402	13711854	-	transcript583.chr6.nic@RANBP9	transcript583.chr6.nic	protein_coding	13710935,13695402	13711854,13696896	Gene ID= ENSG00000010017.12 TPM= 4.67 Transcript Type= NA
chr6	13621498	13711564	13621498	13711564	-	ENST00000011619.5@RANBP9	ENST00000011619.5	protein_coding	13710935,13696785,13658780,13657109,13652659,13644545,13642479,13641199,13639563,13637808,13634431,13632370,13625653,13621498	13711564,13696896,13658832,13657276,13652681,13644729,13642591,13641307,13639753,13637955,13634552,13632521,13625764,13622492	Gene ID= ENSG00000010017.12 TPM= 18.68 Transcript Type= protein_coding
chr6	13786557	13814568	13786557	13814568	-	ENST00000379170.8@MCUR1	ENST00000379170.8	protein_coding	13814015,13806925,13802243,13801288,13800341,13798833,13793894,13791878,13786557	13814568,13807044,13802346,13801389,13800382,13798904,13793947,13791992,13790864	Gene ID= ENSG00000050393.11 TPM= 2.34 Transcript Type= protein_coding
chr6	13786738	13814555	13786738	13814555	-	transcript590.chr6.nic@MCUR1	transcript590.chr6.nic	protein_coding	13814015,13806925,13802243,13801288,13800341,13798833,13793894,13791878,13786738	13814555,13807044,13802346,13801389,13800382,13798904,13793947,13791992,13788704	Gene ID= ENSG00000050393.11 TPM= 4.67 Transcript Type= NA
chr6	13924446	13980008	13924446	13980008	+	ENST00000537663.5@RNF182	ENST00000537663.5	protein_coding	13924446,13974210,13976909	13924572,13974364,13980008	Gene ID= ENSG00000180537.12 TPM= 3.5 Transcript Type= protein_coding
chr6	13924867	13980302	13924867	13980302	+	ENST00000488300.5@RNF182	ENST00000488300.5	protein_coding	13924867,13974210,13976909	13925023,13974364,13980302	Gene ID= ENSG00000180537.12 TPM= 5.84 Transcript Type= protein_coding
chr6	14290585	14300441	14290585	14300441	-	transcript612.chr6.nnic@NA	transcript612.chr6.nnic	NA	14300139,14295305,14290585	14300441,14295383,14293296	Gene ID= novel_gene_chr6_613 TPM= 2.34 Transcript Type= NA
chr6	15383306	15384707	15383306	15384707	-	transcript620.chr6.nnic@NA	transcript620.chr6.nnic	NA	15383306	15384707	Gene ID= novel_gene_chr6_621 TPM= 3.5 Transcript Type= NA
chr6	15424135	15427485	15424135	15427485	-	transcript622.chr6.nnic@NA	transcript622.chr6.nnic	NA	15424135	15427485	Gene ID= novel_gene_chr6_623 TPM= 2.34 Transcript Type= NA
chr6	15522807	15663066	15522807	15663066	-	transcript624.chr6.nic@DTNBP1	transcript624.chr6.nic	protein_coding	15662814,15660383,15652087,15651313,15637744,15627343,15615267,15593059,15533240,15524526,15522807	15663066,15660521,15652140,15651363,15637804,15627475,15615399,15593081,15533395,15524669,15523219	Gene ID= ENSG00000047579.19 TPM= 4.67 Transcript Type= NA
chr6	15522810	15663058	15522810	15663058	-	ENST00000355917.7@DTNBP1	ENST00000355917.7	protein_coding	15662814,15652087,15637744,15627343,15615267,15593059,15533240,15524526,15522810	15663058,15652140,15637804,15627475,15615399,15593081,15533395,15524669,15523219	Gene ID= ENSG00000047579.19 TPM= 3.5 Transcript Type= protein_coding
chr6	15522810	15663058	15522810	15663058	-	ENST00000622898.4@DTNBP1	ENST00000622898.4	protein_coding	15662814,15637744,15627343,15615267,15593059,15533240,15524526,15522810	15663058,15637804,15627475,15615399,15593081,15533395,15524669,15523219	Gene ID= ENSG00000047579.19 TPM= 1.17 Transcript Type= protein_coding
chr6	15532698	15663054	15532698	15663054	-	transcript632.chr6.nic@DTNBP1	transcript632.chr6.nic	protein_coding	15662814,15652087,15651313,15637744,15627343,15615267,15593059,15532698	15663054,15652140,15651363,15637804,15627475,15615399,15593081,15533395	Gene ID= ENSG00000047579.19 TPM= 2.34 Transcript Type= NA
chr6	15529355	15533769	15529355	15533769	-	transcript635.chr6.nnic@DTNBP1	transcript635.chr6.nnic	protein_coding	15533697,15533240,15529355	15533769,15533395,15530762	Gene ID= ENSG00000047579.19 TPM= 2.34 Transcript Type= NA
chr6	15522801	15663042	15522801	15663042	-	ENST00000344537.9@DTNBP1	ENST00000344537.9	protein_coding	15662814,15652087,15651313,15637744,15627343,15615267,15593059,15533240,15524526,15522801	15663042,15652140,15651363,15637804,15627475,15615399,15593081,15533395,15524669,15523219	Gene ID= ENSG00000047579.19 TPM= 35.03 Transcript Type= protein_coding
chr6	15522843	15663058	15522843	15663058	-	ENST00000513680.5@DTNBP1	ENST00000513680.5	protein_coding	15662814,15660383,15652087,15651313,15637744,15627343,15615267,15593059,15533236,15524526,15522843	15663058,15660521,15652140,15651363,15637804,15627475,15615399,15593081,15533395,15524667,15523219	Gene ID= ENSG00000047579.19 TPM= 5.84 Transcript Type= nonsense_mediated_decay
chr6	16129082	16146881	16129082	16146881	+	transcript641.chr6.nic@MYLIP	transcript641.chr6.nic	protein_coding	16129082,16130557,16141625,16143020,16143699,16144897	16129409,16130747,16141810,16143217,16143863,16146881	Gene ID= ENSG00000007944.14 TPM= 17.51 Transcript Type= NA
chr6	16129125	16146881	16129125	16146881	+	ENST00000356840.7@MYLIP	ENST00000356840.7	protein_coding	16129125,16130557,16141625,16143020,16143699,16144897,16146662	16129409,16130747,16141810,16143217,16143863,16145317,16146881	Gene ID= ENSG00000007944.14 TPM= 26.85 Transcript Type= protein_coding
chr6	16238580	16295549	16238580	16295549	+	ENST00000259727.4@GMPR	ENST00000259727.4	protein_coding	16238580,16246842,16250284,16254562,16274415,16278784,16285793,16290462,16295006	16238780,16246961,16250367,16254735,16274496,16278890,16285835,16290621,16295549	Gene ID= ENSG00000137198.9 TPM= 36.2 Transcript Type= protein_coding
chr6	16304954	16328167	16304954	16328167	-	transcript656.chr6.nic@ATXN1	transcript656.chr6.nic	protein_coding	16326394,16304954	16328167,16306859	Gene ID= ENSG00000124788.17 TPM= 8.17 Transcript Type= NA
chr6	16738465	16761491	16738465	16761491	-	ENST00000498374.1@ATXN1	ENST00000498374.1	protein_coding	16761298,16738465	16761491,16739918	Gene ID= ENSG00000124788.17 TPM= 1.17 Transcript Type= processed_transcript
chr6	16311086	16313636	16311086	16313636	+	transcript660.chr6.nnic@NA	transcript660.chr6.nnic	NA	16311086	16313636	Gene ID= novel_gene_chr6_661 TPM= 2.34 Transcript Type= NA
chr6	16408268	16409668	16408268	16409668	+	transcript662.chr6.nnic@NA	transcript662.chr6.nnic	NA	16408268	16409668	Gene ID= novel_gene_chr6_663 TPM= 3.5 Transcript Type= NA
chr6	16762081	16766882	16762081	16766882	+	transcript667.chr6.nnic@NA	transcript667.chr6.nnic	NA	16762081	16766882	Gene ID= novel_gene_chr6_668 TPM= 4.67 Transcript Type= NA
chr6	17393216	17557792	17393216	17557792	+	ENST00000229922.6@CAP2	ENST00000229922.6	protein_coding	17393216,17421555,17426590,17462996,17507169,17507641,17513849,17539269,17540973,17542837,17543061,17551464,17556359	17393746,17421676,17426690,17463073,17507312,17507726,17513954,17539458,17541148,17542960,17543143,17551604,17557792	Gene ID= ENSG00000112186.11 TPM= 21.02 Transcript Type= protein_coding
chr6	17600355	17611719	17600355	17611719	+	ENST00000259963.3@FAM8A1	ENST00000259963.3	protein_coding	17600355,17602590,17604906,17605874,17608195	17601121,17602710,17605029,17606013,17611719	Gene ID= ENSG00000137414.5 TPM= 107.42 Transcript Type= protein_coding
chr6	17615038	17706387	17615038	17706387	-	ENST00000262077.2@NUP153	ENST00000262077.2	protein_coding	17706277,17688396,17675522,17675229,17674905,17669430,17669293,17668975,17665239,17662018,17661653,17649163,17647807,17646067,17639939,17637153,17632650,17628655,17625808,17624561,17616527,17615038	17706387,17688618,17675770,17675368,17675033,17669546,17669337,17669028,17665385,17662070,17661779,17649300,17647905,17646154,17640064,17637770,17632844,17629539,17626164,17624833,17616695,17616181	Gene ID= ENSG00000124789.11 TPM= 12.84 Transcript Type= protein_coding
chr6	17630750	17632861	17630750	17632861	+	transcript686.chr6.nnic@NA	transcript686.chr6.nnic	NA	17630750	17632861	Gene ID= novel_gene_chr6_687 TPM= 3.5 Transcript Type= NA
chr6	17662049	17665063	17662049	17665063	+	transcript684.chr6.nnic@NA	transcript684.chr6.nnic	NA	17662049	17665063	Gene ID= novel_gene_chr6_685 TPM= 4.67 Transcript Type= NA
chr6	17816074	17988225	17816074	17988225	-	transcript694.chr6.nic@KIF13A	transcript694.chr6.nic	protein_coding	17987409,17987054,17898168,17873377,17856030,17855437,17851955,17850323,17849377,17837472,17836878,17833961,17831101,17828240,17826038,17825768,17816074	17988225,17987144,17898180,17873437,17856122,17855617,17852042,17850457,17849489,17837583,17837090,17834071,17831235,17828370,17826124,17825934,17817233	Gene ID= ENSG00000137177.19 TPM= 4.67 Transcript Type= NA
chr6	17854547	17987648	17854547	17987648	-	transcript695.chr6.nic@KIF13A	transcript695.chr6.nic	protein_coding	17987409,17987054,17898168,17873377,17856030,17854547	17987648,17987144,17898180,17873437,17856122,17855617	Gene ID= ENSG00000137177.19 TPM= 3.5 Transcript Type= NA
chr6	17950406	17987623	17950406	17987623	-	ENST00000502704.2@KIF13A	ENST00000502704.2	protein_coding	17987409,17987054,17950406	17987623,17987144,17951429	Gene ID= ENSG00000137177.19 TPM= 2.34 Transcript Type= protein_coding
chr6	18120440	18122687	18120440	18122687	-	ENST00000340650.5@NHLRC1	ENST00000340650.5	protein_coding	18120440	18122687	Gene ID= ENSG00000187566.5 TPM= 5.84 Transcript Type= protein_coding
chr6	18128313	18155153	18128313	18155153	-	transcript700.chr6.nnic@TPMT	transcript700.chr6.nnic	protein_coding	18155033,18148988,18147823,18143596,18139665,18138963,18133804,18132133,18130267,18128313	18155153,18149171,18147915,18143728,18139717,18139037,18133889,18132177,18130780,18128801	Gene ID= ENSG00000137364.4 TPM= 2.34 Transcript Type= NA
chr6	18129713	18155153	18129713	18155153	-	transcript705.chr6.nnic@TPMT	transcript705.chr6.nnic	protein_coding	18155033,18148988,18147823,18143596,18139665,18138963,18132133,18129713	18155153,18149171,18147915,18143728,18139717,18139037,18132177,18130780	Gene ID= ENSG00000137364.4 TPM= 2.34 Transcript Type= NA
chr6	18128311	18155074	18128311	18155074	-	ENST00000309983.4@TPMT	ENST00000309983.4	protein_coding	18155033,18148988,18147823,18143596,18139665,18138963,18133804,18132133,18128311	18155074,18149171,18147915,18143728,18139717,18139037,18133889,18132177,18130780	Gene ID= ENSG00000137364.4 TPM= 4.67 Transcript Type= protein_coding
chr6	18224181	18264264	18224181	18264264	-	transcript712.chr6.nnic@DEK	transcript712.chr6.nnic	protein_coding	18264098,18263843,18258304,18257953,18256361,18255731,18249651,18237381,18236452,18226174,18224181	18264264,18263996,18258405,18258062,18256455,18255851,18249839,18237516,18236600,18226242,18225730	Gene ID= ENSG00000124795.14 TPM= 12.84 Transcript Type= NA
chr6	18223868	18264823	18223868	18264823	-	ENST00000397239.7@DEK	ENST00000397239.7	protein_coding	18264385,18263843,18258304,18257953,18256361,18255731,18249651,18237381,18236452,18226174,18223868	18264823,18263996,18258405,18258062,18256455,18255851,18249839,18237516,18236600,18226242,18225730	Gene ID= ENSG00000124795.14 TPM= 145.95 Transcript Type= protein_coding
chr6	18387350	18468874	18387350	18468874	+	ENST00000259939.3@RNF144B	ENST00000259939.3	protein_coding	18387350,18399499,18427581,18439684,18457155,18459607,18463291,18464927	18387630,18399699,18427685,18439744,18457359,18459751,18463380,18468874	Gene ID= ENSG00000137393.9 TPM= 37.07 Transcript Type= protein_coding
chr6	18387349	18468615	18387349	18468615	+	transcript732.chr6.nnic@RNF144B	transcript732.chr6.nnic	protein_coding	18387349,18399499,18427581,18439684,18459607,18463291,18464927	18387630,18399699,18427685,18439744,18459751,18463380,18468615	Gene ID= ENSG00000137393.9 TPM= 6.71 Transcript Type= NA
chr6	18387349	18468615	18387349	18468615	+	transcript733.chr6.nnic@RNF144B	transcript733.chr6.nnic	protein_coding	18387349,18399499,18439684,18457155,18459607,18463291,18464927	18387630,18399699,18439744,18457359,18459751,18463380,18468615	Gene ID= ENSG00000137393.9 TPM= 9.05 Transcript Type= NA
chr6	18387349	18440671	18387349	18440671	+	transcript739.chr6.nic@RNF144B	transcript739.chr6.nic	protein_coding	18387349,18399499,18427581,18439684	18387630,18399699,18427685,18440671	Gene ID= ENSG00000137393.9 TPM= 3.5 Transcript Type= NA
chr6	18440797	18445723	18440797	18445723	-	transcript742.chr6.nnic@NA	transcript742.chr6.nnic	NA	18440797	18445723	Gene ID= novel_gene_chr6_743 TPM= 4.67 Transcript Type= NA
chr6	19837370	19840684	19837370	19840684	+	transcript751.chr6.nic@ID4	transcript751.chr6.nic	protein_coding	19837370,19839210	19838642,19840684	Gene ID= ENSG00000172201.11 TPM= 3.5 Transcript Type= NA
chr6	19837372	19840690	19837372	19840690	+	transcript754.chr6.nnic@ID4	transcript754.chr6.nnic	protein_coding	19837372,19839210	19838195,19840690	Gene ID= ENSG00000172201.11 TPM= 2.34 Transcript Type= NA
chr6	19837386	19840684	19837386	19840684	+	ENST00000378700.7@ID4	ENST00000378700.7	protein_coding	19837386,19838584,19839210	19838195,19838642,19840684	Gene ID= ENSG00000172201.11 TPM= 51.37 Transcript Type= protein_coding
chr6	19837371	19840683	19837371	19840683	+	transcript759.chr6.nnic@NA	transcript759.chr6.nnic	NA	19837371	19840683	Gene ID= novel_gene_chr6_760 TPM= 3.5 Transcript Type= NA
chr6	20150563	20212503	20150563	20212503	-	transcript765.chr6.nic@MBOAT1	transcript765.chr6.nic	protein_coding	20212136,20152624,20150563	20212503,20152769,20151262	Gene ID= ENSG00000172197.10 TPM= 3.5 Transcript Type= NA
chr6	20534481	20559672	20534481	20559672	+	ENST00000613575.4@CDKAL1	ENST00000613575.4	protein_coding	20534481,20535087,20535351,20546346,20548593,20558542	20534574,20535199,20535394,20546523,20548705,20559672	Gene ID= ENSG00000145996.11 TPM= 1.17 Transcript Type= protein_coding
chr6	20534457	21232404	20534457	21232404	+	ENST00000274695.8@CDKAL1	ENST00000274695.8	protein_coding	20534457,20535351,20546346,20548593,20649293,20739519,20758595,20781145,20846075,20955419,21000227,21065048,21108401,21198021,21201110,21230848	20534574,20535394,20546523,20548705,20649377,20739615,20758643,20781265,20846178,20955585,21000372,21065228,21108463,21198104,21201274,21232404	Gene ID= ENSG00000145996.11 TPM= 11.68 Transcript Type= protein_coding
chr6	21072678	21075278	21072678	21075278	-	transcript772.chr6.nnic@NA	transcript772.chr6.nnic	NA	21072678	21075278	Gene ID= novel_gene_chr6_773 TPM= 2.34 Transcript Type= NA
chr6	21592768	21598619	21592768	21598619	+	ENST00000244745.3@SOX4	ENST00000244745.3	protein_coding	21592768	21598619	Gene ID= ENSG00000124766.6 TPM= 21.02 Transcript Type= protein_coding
chr6	21851046	21853794	21851046	21853794	-	transcript787.chr6.nnic@NA	transcript787.chr6.nnic	NA	21851816,21851630,21851046	21853794,21851719,21851439	Gene ID= novel_gene_chr6_788 TPM= 2.34 Transcript Type= NA
chr6	22146571	22149626	22146571	22149626	-	transcript789.chr6.nnic@NA	transcript789.chr6.nnic	NA	22146571	22149626	Gene ID= novel_gene_chr6_790 TPM= 3.5 Transcript Type= NA
chr6	24171756	24358052	24171756	24358052	-	ENST00000378454.7@DCDC2	ENST00000378454.7	protein_coding	24357458,24353569,24301968,24301715,24290932,24288852,24278049,24205002,24178330,24171756	24358052,24353623,24302044,24301846,24291078,24288906,24278211,24205102,24178632,24174834	Gene ID= ENSG00000146038.11 TPM= 2.34 Transcript Type= protein_coding
chr6	24402954	24425582	24402954	24425582	+	ENST00000378386.7@MRS2	ENST00000378386.7	protein_coding	24402954,24405168,24408408,24409461,24412222,24415033,24416397,24418084,24418461,24422937,24423584	24403236,24405241,24408444,24409573,24412395,24415163,24416513,24418236,24418578,24423050,24425582	Gene ID= ENSG00000124532.14 TPM= 9.34 Transcript Type= protein_coding
chr6	24402954	24423476	24402954	24423476	+	ENST00000378353.5@MRS2	ENST00000378353.5	protein_coding	24402954,24405168,24408408,24409461,24412222,24415033,24416397,24418084,24418461,24422937	24403236,24405241,24408444,24409573,24412395,24415163,24416513,24418236,24418578,24423476	Gene ID= ENSG00000124532.14 TPM= 5.84 Transcript Type= protein_coding
chr6	24428177	24495649	24428177	24495649	-	transcript796.chr6.nic@GPLD1	transcript796.chr6.nic	protein_coding	24494967,24489415,24486075,24479881,24476181,24475121,24473619,24472582,24467167,24466912,24466680,24462730,24460279,24456498,24454015,24449789,24448134,24447877,24446838,24445726,24445546,24437113,24436576,24433363,24433187,24428177	24495649,24489497,24486130,24479959,24476278,24475231,24473667,24472636,24467274,24466939,24466819,24462795,24460399,24456637,24454201,24449899,24448208,24448033,24446979,24445831,24445639,24437289,24436736,24433389,24433237,24429118	Gene ID= ENSG00000112293.14 TPM= 2.34 Transcript Type= NA
chr6	24494852	24537207	24494852	24537207	+	ENST00000357578.7@ALDH5A1	ENST00000357578.7	protein_coding	24494852,24502523,24503263,24504869,24515167,24520401,24522767,24527997,24532119,24533507	24495350,24502606,24503433,24504985,24515310,24520544,24522925,24528166,24532177,24537207	Gene ID= ENSG00000112294.12 TPM= 17.51 Transcript Type= protein_coding
chr6	24656408	24664344	24656408	24664344	+	transcript842.chr6.nnic@NA	transcript842.chr6.nnic	NA	24656408	24664344	Gene ID= novel_gene_chr6_843 TPM= 24.52 Transcript Type= NA
chr6	24667035	24705065	24667035	24705065	+	ENST00000537591.5@ACOT13	ENST00000537591.5	protein_coding	24667035,24687405,24697883,24701459	24667344,24687693,24698067,24705065	Gene ID= ENSG00000112304.10 TPM= 1.17 Transcript Type= protein_coding
chr6	24667071	24705046	24667071	24705046	+	ENST00000230048.4@ACOT13	ENST00000230048.4	protein_coding	24667071,24697883,24701459	24667344,24698067,24705046	Gene ID= ENSG00000112304.10 TPM= 2.34 Transcript Type= protein_coding
chr6	24667063	24669953	24667063	24669953	+	transcript844.chr6.nnic@NA	transcript844.chr6.nnic	NA	24667063	24669953	Gene ID= novel_gene_chr6_845 TPM= 4.67 Transcript Type= NA
chr6	24704861	24720836	24704861	24720836	-	ENST00000378119.8@C6orf62	ENST00000378119.8	protein_coding	24718540,24716148,24714318,24708777,24704861	24720836,24716324,24714440,24708911,24706262	Gene ID= ENSG00000112308.12 TPM= 156.46 Transcript Type= protein_coding
chr6	24774931	24786095	24774931	24786095	+	ENST00000356509.7@GMNN	ENST00000356509.7	protein_coding	24774931,24777222,24780663,24781477,24784087,24784444,24785638	24775112,24777297,24780740,24781621,24784169,24784554,24786095	Gene ID= ENSG00000112312.9 TPM= 1.17 Transcript Type= protein_coding
chr6	24774938	24786099	24774938	24786099	+	ENST00000230056.7@GMNN	ENST00000230056.7	protein_coding	24774938,24777222,24780663,24781477,24784087,24784444,24785638	24775244,24777297,24780740,24781621,24784169,24784554,24786099	Gene ID= ENSG00000112312.9 TPM= 1.17 Transcript Type= protein_coding
chr6	24804282	24936052	24804282	24936052	-	ENST00000538035.5@RIPOR2	ENST00000538035.5	protein_coding	24935838,24875691,24873644,24872881,24870866,24869094,24865301,24860973,24852575,24850597,24849802,24848025,24842862,24839091,24835703,24832256,24830509,24828137,24825226,24818542,24809717,24804282	24936052,24875817,24873799,24872959,24870889,24869147,24865450,24861036,24852618,24850722,24849950,24848154,24843554,24839272,24835871,24832391,24830670,24828295,24825428,24818625,24809807,24806473	Gene ID= ENSG00000111913.17 TPM= 9.34 Transcript Type= protein_coding
chr6	24839359	24935984	24839359	24935984	-	transcript851.chr6.nic@RIPOR2	transcript851.chr6.nic	protein_coding	24935838,24875691,24873644,24872881,24870866,24869094,24865301,24860973,24852575,24850597,24849802,24848025,24842862,24839359	24935984,24875817,24873799,24872959,24870889,24869147,24865450,24861036,24852618,24850722,24849950,24848154,24843554,24839599	Gene ID= ENSG00000111913.17 TPM= 2.34 Transcript Type= NA
chr6	24839359	24935984	24839359	24935984	-	transcript852.chr6.nic@RIPOR2	transcript852.chr6.nic	protein_coding	24935838,24875691,24873644,24872881,24870866,24869094,24865301,24860973,24852575,24850597,24849802,24848025,24842862,24839359	24935984,24875817,24873799,24872959,24870889,24869147,24865450,24861036,24852618,24850722,24849950,24848154,24843554,24840775	Gene ID= ENSG00000111913.17 TPM= 3.5 Transcript Type= NA
chr6	25105746	25138349	25105746	25138349	-	transcript877.chr6.nic@CMAHP	transcript877.chr6.nic	transcribed_unitary_pseudogene	25138074,25137620,25114991,25113592,25109956,25109500,25108576,25105746	25138349,25137823,25115100,25113782,25110103,25109581,25108713,25106529	Gene ID= ENSG00000168405.16 TPM= 2.34 Transcript Type= NA
chr6	25088542	25094518	25088542	25094518	-	transcript878.chr6.nic@CMAHP	transcript878.chr6.nic	transcribed_unitary_pseudogene	25093514,25088542	25094518,25092012	Gene ID= ENSG00000168405.16 TPM= 4.67 Transcript Type= NA
chr6	25164945	25166555	25164945	25166555	-	transcript880.chr6.nnic@NA	transcript880.chr6.nnic	NA	25164945	25166555	Gene ID= novel_gene_chr6_881 TPM= 4.67 Transcript Type= NA
chr6	25279429	25620530	25279429	25620530	+	transcript884.chr6.nnic@CARMIL1	transcript884.chr6.nnic	protein_coding	25279429,25284812,25420114,25426501,25435483,25449898,25450339,25450638,25465873,25471169,25472427,25482257,25488482,25491732,25491948,25495111,25500166,25509656,25510507,25510708,25515675,25517347,25520244,25528795,25537855,25539947,25550910,25554009,25556701,25580924,25581243,25594415,25600314,25604812,25606079,25610050,25619447	25279835,25284909,25420164,25426560,25435604,25449995,25450409,25450711,25465948,25471257,25472521,25482343,25488585,25491809,25492024,25495215,25500235,25509737,25510606,25510762,25515847,25517415,25520337,25528893,25537983,25540078,25551085,25554096,25556850,25580990,25581439,25594527,25600746,25604893,25606273,25610181,25620530	Gene ID= ENSG00000079691.17 TPM= 5.84 Transcript Type= NA
chr6	25279428	25620530	25279428	25620530	+	ENST00000329474.6@CARMIL1	ENST00000329474.6	protein_coding	25279428,25284812,25420114,25426501,25435483,25449898,25450339,25450638,25465873,25471169,25472427,25482257,25488482,25491732,25491948,25495111,25500166,25509656,25510507,25510708,25515675,25517347,25520244,25528795,25537855,25539947,25550910,25554009,25556701,25580924,25581243,25594415,25600314,25604812,25606061,25610050,25619447	25279835,25284909,25420164,25426560,25435604,25449995,25450409,25450711,25465948,25471257,25472521,25482343,25488585,25491809,25492024,25495215,25500235,25509737,25510606,25510762,25515847,25517415,25520337,25528893,25537983,25540078,25551085,25554096,25556850,25580990,25581439,25594527,25600746,25604893,25606273,25610181,25620530	Gene ID= ENSG00000079691.17 TPM= 19.85 Transcript Type= protein_coding
chr6	25317564	25319635	25317564	25319635	-	transcript891.chr6.nnic@NA	transcript891.chr6.nnic	NA	25317564	25319635	Gene ID= novel_gene_chr6_892 TPM= 3.5 Transcript Type= NA
chr6	25970753	25971019	25970753	25971019	-	transcript908.chr6.nnic@NA	transcript908.chr6.nnic	NA	25970753	25971019	Gene ID= novel_gene_chr6_909 TPM= 2.34 Transcript Type= NA
chr6	25992662	26001775	25992662	26001775	+	ENST00000606723.2@U91328.2	ENST00000606723.2	lincRNA	25992662,25997903	25992918,26001775	Gene ID= ENSG00000272462.2 TPM= 1.17 Transcript Type= lincRNA
chr6	26055705	26056475	26055705	26056475	-	transcript911.chr6.nnic@NA	transcript911.chr6.nnic	NA	26055705	26056475	Gene ID= novel_gene_chr6_912 TPM= 12.84 Transcript Type= NA
chr6	26087319	26098343	26087319	26098343	+	ENST00000357618.9@HFE	ENST00000357618.9	protein_coding	26087319,26090841,26091314,26092685,26093119,26094186	26087516,26091104,26091589,26092960,26093232,26098343	Gene ID= ENSG00000010704.18 TPM= 1.17 Transcript Type= protein_coding
chr6	26103876	26104310	26103876	26104310	+	ENST00000377803.3@HIST1H4C	ENST00000377803.3	protein_coding	26103876	26104310	Gene ID= ENSG00000197061.4 TPM= 2.34 Transcript Type= protein_coding
chr6	26124170	26139109	26124170	26139109	+	transcript920.chr6.nnic@HIST1H2AC	transcript920.chr6.nnic	protein_coding	26124170,26127698,26138054	26124749,26127761,26139109	Gene ID= ENSG00000180573.9 TPM= 8.17 Transcript Type= NA
chr6	26124172	26139109	26124172	26139109	+	transcript922.chr6.nnic@HIST1H2AC	transcript922.chr6.nnic	protein_coding	26124172,26127698,26138054	26124633,26127761,26139109	Gene ID= ENSG00000180573.9 TPM= 2.34 Transcript Type= NA
chr6	26124203	26139084	26124203	26139084	+	ENST00000602637.1@HIST1H2AC	ENST00000602637.1	protein_coding	26124203,26138054	26124633,26139084	Gene ID= ENSG00000180573.9 TPM= 2.34 Transcript Type= protein_coding
chr6	26224199	26227473	26224199	26227473	+	ENST00000634733.1@HIST1H3E	ENST00000634733.1	protein_coding	26224199,26224902	26224305,26227473	Gene ID= ENSG00000274750.2 TPM= 1.17 Transcript Type= protein_coding
chr6	26365159	26378320	26365159	26378320	+	ENST00000508906.6@BTN3A2	ENST00000508906.6	protein_coding	26365159,26367990,26368565,26370322,26372897,26373276,26373387,26374327,26374771,26375797	26365352,26368050,26368912,26370603,26373097,26373296,26373413,26374373,26374798,26378320	Gene ID= ENSG00000186470.13 TPM= 36.2 Transcript Type= protein_coding
chr6	26365264	26376236	26365264	26376236	+	ENST00000377708.6@BTN3A2	ENST00000377708.6	protein_coding	26365264,26367990,26368178,26368565,26370322,26372897,26373276,26373387,26374327,26374771,26375797	26365352,26368050,26368267,26368912,26370603,26373097,26373296,26373413,26374373,26374798,26376236	Gene ID= ENSG00000186470.13 TPM= 10.51 Transcript Type= protein_coding
chr6	26365266	26375816	26365266	26375816	+	ENST00000396948.5@BTN3A2	ENST00000396948.5	protein_coding	26365266,26367990,26368178,26368565,26370322,26372897,26373276,26373387,26374327,26374771,26375515	26365352,26368050,26368267,26368912,26370603,26373097,26373296,26373413,26374373,26374798,26375816	Gene ID= ENSG00000186470.13 TPM= 1.17 Transcript Type= protein_coding
chr6	26383101	26394874	26383101	26394874	+	ENST00000356709.8@BTN2A2	ENST00000356709.8	protein_coding	26383101,26383792,26385015,26388013,26390005,26390687,26390803,26392375	26383181,26383915,26385362,26388294,26390211,26390707,26390829,26394874	Gene ID= ENSG00000124508.16 TPM= 5.84 Transcript Type= protein_coding
chr6	26383209	26393992	26383209	26393992	+	transcript981.chr6.nic@BTN2A2	transcript981.chr6.nic	protein_coding	26383209,26383792,26385015,26388013,26390005,26390687,26390803,26392375	26383244,26383915,26385362,26388294,26390211,26390707,26390829,26393992	Gene ID= ENSG00000124508.16 TPM= 2.34 Transcript Type= NA
chr6	26383140	26393992	26383140	26393992	+	transcript982.chr6.nic@BTN2A2	transcript982.chr6.nic	protein_coding	26383140,26383792,26385015,26388013,26390005,26390687,26390803,26392375	26383299,26383915,26385362,26388294,26390211,26390707,26390829,26393992	Gene ID= ENSG00000124508.16 TPM= 3.5 Transcript Type= NA
chr6	26383102	26394874	26383102	26394874	+	ENST00000352867.6@BTN2A2	ENST00000352867.6	protein_coding	26383102,26383792,26388013,26390005,26390687,26390803,26392375	26383181,26383915,26388294,26390211,26390707,26390829,26394874	Gene ID= ENSG00000124508.16 TPM= 2.34 Transcript Type= protein_coding
chr6	26383103	26393987	26383103	26393987	+	transcript995.chr6.nic@BTN2A2	transcript995.chr6.nic	protein_coding	26383103,26383792,26385015,26388013,26390005,26390687	26383181,26383915,26385362,26388294,26390211,26393987	Gene ID= ENSG00000124508.16 TPM= 2.34 Transcript Type= NA
chr6	26383103	26390640	26383103	26390640	+	transcript998.chr6.nic@BTN2A2	transcript998.chr6.nic	protein_coding	26383103,26383792,26385015,26388013,26390005	26383181,26383915,26385362,26388294,26390640	Gene ID= ENSG00000124508.16 TPM= 2.34 Transcript Type= NA
chr6	26383208	26393992	26383208	26393992	+	ENST00000416795.6@BTN2A2	ENST00000416795.6	protein_coding	26383208,26383792,26385015,26388013,26390005,26390687,26390803,26392375	26383313,26383915,26385362,26388294,26390211,26390707,26390829,26393992	Gene ID= ENSG00000124508.16 TPM= 3.5 Transcript Type= protein_coding
chr6	26402237	26415216	26402237	26415216	+	ENST00000289361.10@BTN3A1	ENST00000289361.10	protein_coding	26402237,26405372,26405909,26407671,26409533,26409894,26410006,26411109,26411555,26413169	26402412,26405648,26406256,26407952,26409733,26409914,26410032,26411135,26411581,26415216	Gene ID= ENSG00000026950.16 TPM= 31.33 Transcript Type= protein_coding
chr6	26402250	26412920	26402250	26412920	+	ENST00000425234.6@BTN3A1	ENST00000425234.6	protein_coding	26402250,26405372,26405909,26407671,26409533,26409894,26410006,26411109,26411555,26412412	26402412,26405648,26406256,26407952,26409733,26409914,26410032,26411135,26411581,26412920	Gene ID= ENSG00000026950.16 TPM= 2.34 Transcript Type= protein_coding
chr6	26402251	26415213	26402251	26415213	+	transcript963.chr6.nic@BTN3A1	transcript963.chr6.nic	protein_coding	26402251,26405372,26405909,26407671,26409533,26409894,26410006,26411109,26411555,26412705	26402412,26405648,26406256,26407952,26409733,26409914,26410032,26411135,26411581,26415213	Gene ID= ENSG00000026950.16 TPM= 9.73 Transcript Type= NA
chr6	26402251	26415207	26402251	26415207	+	transcript971.chr6.nic@BTN3A1	transcript971.chr6.nic	protein_coding	26402251,26405372,26405909,26407671,26409533,26409894,26410006,26411109,26411555	26402412,26405648,26406256,26407952,26409733,26409914,26410032,26411135,26415207	Gene ID= ENSG00000026950.16 TPM= 6.22 Transcript Type= NA
chr6	26402308	26415204	26402308	26415204	+	ENST00000082468.11@BTN3A1	ENST00000082468.11	protein_coding	26402308,26405372,26405909,26407671,26409533,26409894,26411109,26411555,26413169	26402412,26405648,26406256,26407952,26409733,26410032,26411135,26411581,26415204	Gene ID= ENSG00000026950.16 TPM= 4.09 Transcript Type= retained_intron
chr6	26422680	26432252	26422680	26432252	+	transcript1002.chr6.nic@BTN2A3P	transcript1002.chr6.nic	transcribed_unprocessed_pseudogene	26422680,26426182,26427871,26428643,26431272	26423759,26426523,26428107,26428785,26432252	Gene ID= ENSG00000124549.14 TPM= 2.34 Transcript Type= NA
chr6	26431275	26434261	26431275	26434261	+	transcript1014.chr6.nnic@NA	transcript1014.chr6.nnic	NA	26431275	26434261	Gene ID= novel_gene_chr6_1015 TPM= 2.34 Transcript Type= NA
chr6	26440472	26453415	26440472	26453415	+	ENST00000244519.6@BTN3A3	ENST00000244519.6	protein_coding	26440472,26443382,26443570,26443957,26445704,26448248,26448617,26448728,26449662,26450107,26451675	26440648,26443442,26443659,26444304,26445985,26448448,26448637,26448754,26449688,26450133,26453415	Gene ID= ENSG00000111801.15 TPM= 29.77 Transcript Type= protein_coding
chr6	26440471	26453415	26440471	26453415	+	transcript957.chr6.nic@BTN3A3	transcript957.chr6.nic	protein_coding	26440471,26443382,26443641,26443957,26445704,26448248,26448617,26448728,26449662,26450107,26451675	26440648,26443442,26443659,26444304,26445985,26448448,26448637,26448754,26449688,26450133,26453415	Gene ID= ENSG00000111801.15 TPM= 8.76 Transcript Type= NA
chr6	26457932	26469637	26457932	26469637	+	transcript975.chr6.nnic@BTN2A1	transcript975.chr6.nnic	protein_coding	26457932,26458607,26459481,26462797,26463244,26465218,26465953,26466062,26467948	26458142,26458718,26459828,26462897,26463525,26465406,26465973,26466088,26469637	Gene ID= ENSG00000112763.15 TPM= 4.29 Transcript Type= NA
chr6	26457925	26469637	26457925	26469637	+	ENST00000312541.9@BTN2A1	ENST00000312541.9	protein_coding	26457925,26458607,26459481,26463244,26465185,26465953,26466062,26467948	26458142,26458718,26459828,26463525,26465406,26465973,26466088,26469637	Gene ID= ENSG00000112763.15 TPM= 15.96 Transcript Type= protein_coding
chr6	26457932	26461506	26457932	26461506	+	transcript1012.chr6.nic@BTN2A1	transcript1012.chr6.nic	protein_coding	26457932,26458607,26459481	26458142,26458718,26461506	Gene ID= ENSG00000112763.15 TPM= 2.34 Transcript Type= NA
chr6	26462030	26469637	26462030	26469637	+	transcript1013.chr6.nic@BTN2A1	transcript1013.chr6.nic	protein_coding	26462030,26465953,26466062	26465406,26465973,26469637	Gene ID= ENSG00000112763.15 TPM= 4.67 Transcript Type= NA
chr6	26457961	26469637	26457961	26469637	+	ENST00000429381.5@BTN2A1	ENST00000429381.5	protein_coding	26457961,26458607,26459481,26463244,26465185,26465953,26466062,26467719	26458142,26458718,26459828,26463525,26465406,26465973,26466088,26469637	Gene ID= ENSG00000112763.15 TPM= 3.12 Transcript Type= protein_coding
chr6	26457922	26469602	26457922	26469602	+	ENST00000377600.6@BTN2A1	ENST00000377600.6	protein_coding	26457922,26458607,26459481,26462797,26463244,26465185,26465953,26466062,26467948	26458142,26458718,26459828,26462897,26463525,26465406,26465973,26466088,26469602	Gene ID= ENSG00000112763.15 TPM= 5.84 Transcript Type= nonsense_mediated_decay
chr6	26521709	26527404	26521709	26527404	+	ENST00000411553.3@HCG11	ENST00000411553.3	lincRNA	26521709	26527404	Gene ID= ENSG00000228223.3 TPM= 1.17 Transcript Type= lincRNA
chr6	26538368	26546928	26538368	26546928	+	transcript1020.chr6.nnic@HMGN4	transcript1020.chr6.nnic	protein_coding	26538368,26539901,26545127	26538501,26540026,26546928	Gene ID= ENSG00000182952.4 TPM= 5.84 Transcript Type= NA
chr6	26596952	26600744	26596952	26600744	+	ENST00000274849.2@ABT1	ENST00000274849.2	protein_coding	26596952,26597914,26598265	26597223,26598110,26600744	Gene ID= ENSG00000146109.4 TPM= 39.7 Transcript Type= protein_coding
chr6	26634388	26659755	26634388	26659755	-	transcript1029.chr6.nnic@ZNF322	transcript1029.chr6.nnic	protein_coding	26659441,26658558,26643659,26636562,26635566,26634388	26659755,26658646,26643728,26638728,26635631,26635250	Gene ID= ENSG00000181315.10 TPM= 2.86 Transcript Type= NA
chr6	26634388	26659755	26634388	26659755	-	transcript1031.chr6.nnic@ZNF322	transcript1031.chr6.nnic	protein_coding	26659441,26658558,26643659,26636667,26635566,26634388	26659755,26658646,26643728,26638728,26635631,26635250	Gene ID= ENSG00000181315.10 TPM= 2.86 Transcript Type= NA
chr6	26634388	26659755	26634388	26659755	-	transcript1032.chr6.nnic@ZNF322	transcript1032.chr6.nnic	protein_coding	26659441,26658558,26643659,26635566,26634388	26659755,26658646,26643728,26638728,26635250	Gene ID= ENSG00000181315.10 TPM= 2.86 Transcript Type= NA
chr6	26634383	26659752	26634383	26659752	-	ENST00000415922.6@ZNF322	ENST00000415922.6	protein_coding	26659441,26658558,26643659,26634383	26659752,26658646,26643728,26638728	Gene ID= ENSG00000181315.10 TPM= 49.56 Transcript Type= protein_coding
chr6	26634393	26659752	26634393	26659752	-	ENST00000456172.5@ZNF322	ENST00000456172.5	protein_coding	26659441,26643659,26634393	26659752,26643728,26638728	Gene ID= ENSG00000181315.10 TPM= 3.74 Transcript Type= protein_coding
chr6	27251189	27256456	27251189	27256456	+	transcript1046.chr6.nic@PRSS16	transcript1046.chr6.nic	protein_coding	27251189,27251750,27252808,27254693,27254986,27255247	27251264,27252040,27252949,27254872,27255131,27256456	Gene ID= ENSG00000112812.15 TPM= 5.84 Transcript Type= NA
chr6	27357823	27375260	27357823	27375260	-	transcript1054.chr6.nnic@ZNF204P	transcript1054.chr6.nnic	processed_pseudogene	27375194,27370136,27367517,27363179,27357823	27375260,27370224,27367612,27363302,27360221	Gene ID= ENSG00000204789.4 TPM= 11.68 Transcript Type= NA
chr6	27357823	27370907	27357823	27370907	-	transcript1056.chr6.nnic@ZNF204P	transcript1056.chr6.nnic	processed_pseudogene	27368607,27367517,27363179,27357823	27370907,27367612,27363302,27360221	Gene ID= ENSG00000204789.4 TPM= 2.34 Transcript Type= NA
chr6	27358745	27371712	27358745	27371712	-	transcript1057.chr6.nnic@ZNF204P	transcript1057.chr6.nnic	processed_pseudogene	27370136,27367517,27363179,27358745	27371712,27367612,27363302,27360221	Gene ID= ENSG00000204789.4 TPM= 2.34 Transcript Type= NA
chr6	27357823	27372906	27357823	27372906	-	transcript1059.chr6.nnic@ZNF204P	transcript1059.chr6.nnic	processed_pseudogene	27367517,27363179,27357823	27372906,27363302,27360221	Gene ID= ENSG00000204789.4 TPM= 3.5 Transcript Type= NA
chr6	27373282	27375250	27373282	27375250	-	transcript1061.chr6.nnic@NA	transcript1061.chr6.nnic	NA	27373282	27375250	Gene ID= novel_gene_chr6_1062 TPM= 2.34 Transcript Type= NA
chr6	27388718	27403904	27388718	27403904	+	ENST00000244576.8@ZNF391	ENST00000244576.8	protein_coding	27388718,27399442,27400293	27389075,27399550,27403904	Gene ID= ENSG00000124613.8 TPM= 1.17 Transcript Type= protein_coding
chr6	27450743	27473109	27450743	27473109	-	transcript1067.chr6.nnic@ZNF184	transcript1067.chr6.nnic	protein_coding	27472729,27472288,27467853,27457283,27456826,27450743	27473109,27472433,27467920,27457409,27456921,27453260	Gene ID= ENSG00000096654.15 TPM= 5.84 Transcript Type= NA
chr6	27450743	27473118	27450743	27473118	-	ENST00000211936.10@ZNF184	ENST00000211936.10	protein_coding	27472973,27472288,27467853,27457283,27456826,27450743	27473118,27472433,27467920,27457409,27456921,27453260	Gene ID= ENSG00000096654.15 TPM= 2.34 Transcript Type= protein_coding
chr6	27453587	27455723	27453587	27455723	+	transcript1073.chr6.nnic@NA	transcript1073.chr6.nnic	NA	27453587	27455723	Gene ID= novel_gene_chr6_1074 TPM= 2.34 Transcript Type= NA
chr6	27814354	27814740	27814354	27814740	-	ENST00000333151.4@HIST1H2AJ	ENST00000333151.4	protein_coding	27814354	27814740	Gene ID= ENSG00000276368.1 TPM= 1.17 Transcript Type= protein_coding
chr6	28080286	28089563	28080286	28089563	+	transcript1075.chr6.nnic@ZNF165	transcript1075.chr6.nnic	protein_coding	28080286,28085479,28086172,28088563	28080968,28085891,28086310,28089563	Gene ID= ENSG00000197279.3 TPM= 7.01 Transcript Type= NA
chr6	28121798	28136866	28121798	28136866	-	ENST00000602810.1@ZSCAN16-AS1	ENST00000602810.1	antisense_RNA	28136745,28121798	28136866,28123211	Gene ID= ENSG00000269293.2 TPM= 1.17 Transcript Type= antisense_RNA
chr6	28124560	28130082	28124560	28130082	+	ENST00000340487.4@ZSCAN16	ENST00000340487.4	protein_coding	28124560,28125413,28126783,28129430	28124677,28125830,28126921,28130082	Gene ID= ENSG00000196812.4 TPM= 4.67 Transcript Type= protein_coding
chr6	28225292	28233466	28225292	28233466	+	ENST00000252207.9@ZSCAN9	ENST00000252207.9	protein_coding	28225292,28227012,28227690,28232562	28225366,28227504,28227837,28233466	Gene ID= ENSG00000137185.11 TPM= 2.34 Transcript Type= protein_coding
chr6	28244623	28252224	28244623	28252224	-	ENST00000377294.2@ZKSCAN4	ENST00000377294.2	protein_coding	28251558,28249687,28248067,28246969,28244623	28252224,28249834,28248149,28247092,28245975	Gene ID= ENSG00000187626.8 TPM= 3.5 Transcript Type= protein_coding
chr6	28267058	28278201	28267058	28278201	+	ENST00000316606.10@ZSCAN26	ENST00000316606.10	protein_coding	28267058,28271854,28272670,28276195	28267213,28271934,28272787,28278201	Gene ID= ENSG00000197062.11 TPM= 7.01 Transcript Type= protein_coding
chr6	28267010	28278221	28267010	28278221	+	ENST00000421553.6@ZSCAN26	ENST00000421553.6	protein_coding	28267010,28271854,28272670,28276195	28267213,28272339,28272787,28278221	Gene ID= ENSG00000197062.11 TPM= 4.67 Transcript Type= protein_coding
chr6	28267359	28278224	28267359	28278224	+	ENST00000619937.4@ZSCAN26	ENST00000619937.4	protein_coding	28267359,28271854,28272670,28276195	28267453,28272339,28272787,28278224	Gene ID= ENSG00000197062.11 TPM= 1.17 Transcript Type= protein_coding
chr6	28281572	28302549	28281572	28302549	+	ENST00000259883.3@PGBD1	ENST00000259883.3	protein_coding	28281572,28283756,28285551,28287080,28296816,28297895,28300724	28281918,28284209,28285707,28287168,28296945,28297991,28302549	Gene ID= ENSG00000137338.5 TPM= 1.17 Transcript Type= protein_coding
chr6	28324737	28354206	28324737	28354206	-	transcript1113.chr6.nic@ZSCAN31	transcript1113.chr6.nic	protein_coding	28353862,28336790,28329303,28327383,28324737	28354206,28336943,28329714,28327533,28326854	Gene ID= ENSG00000235109.7 TPM= 3.5 Transcript Type= NA
chr6	28324737	28354206	28324737	28354206	-	transcript1119.chr6.nnic@ZSCAN31	transcript1119.chr6.nnic	protein_coding	28353862,28329303,28327383,28324737	28354206,28329778,28327533,28326854	Gene ID= ENSG00000235109.7 TPM= 4.67 Transcript Type= NA
chr6	28349926	28369170	28349926	28369170	+	transcript1106.chr6.nnic@ZKSCAN3	transcript1106.chr6.nnic	protein_coding	28349926,28359525,28361324,28363303,28363692,28365426	28349964,28359988,28361471,28363385,28363815,28369170	Gene ID= ENSG00000189298.13 TPM= 4.09 Transcript Type= NA
chr6	28349914	28369177	28349914	28369177	+	ENST00000252211.6@ZKSCAN3	ENST00000252211.6	protein_coding	28349914,28359525,28361324,28363303,28363692,28365426	28350067,28359988,28361471,28363385,28363815,28369177	Gene ID= ENSG00000189298.13 TPM= 2.92 Transcript Type= protein_coding
chr6	28903002	28924013	28903002	28924013	-	transcript1130.chr6.nic@TRIM27	transcript1130.chr6.nic	protein_coding	28923213,28921892,28920012,28908973,28908808,28907236,28903002	28924013,28921987,28920242,28911718,28908840,28907262,28904665	Gene ID= ENSG00000204713.10 TPM= 14.01 Transcript Type= NA
chr6	28903002	28923989	28903002	28923989	-	ENST00000377199.3@TRIM27	ENST00000377199.3	protein_coding	28923213,28921892,28920012,28911696,28908973,28908808,28907236,28903002	28923989,28921987,28920242,28911718,28909088,28908840,28907262,28904665	Gene ID= ENSG00000204713.10 TPM= 64.22 Transcript Type= protein_coding
chr6	29474213	29479642	29474213	29479642	-	transcript1135.chr6.nnic@MAS1LP1	transcript1135.chr6.nnic	unprocessed_pseudogene	29479549,29479360,29476513,29476217,29475890,29474213	29479642,29479442,29476734,29476306,29476010,29475785	Gene ID= ENSG00000230164.1 TPM= 2.34 Transcript Type= NA
chr6	29484764	29494146	29484764	29494146	-	transcript1139.chr6.nnic@MAS1L	transcript1139.chr6.nnic	protein_coding	29493991,29490898,29484764	29494146,29491516,29488857	Gene ID= ENSG00000204687.4 TPM= 2.34 Transcript Type= NA
chr6	29602230	29633135	29602230	29633135	-	ENST00000377016.8@GABBR1	ENST00000377016.8	protein_coding	29632850,29632301,29631396,29629087,29627486,29623890,29623305,29622104,29621752,29621101,29613243,29612551,29610924,29609229,29608601,29607102,29606897,29606391,29605569,29604860,29604494,29602230	29633135,29632385,29631599,29629107,29627646,29624024,29623475,29622205,29621817,29621292,29613485,29612614,29611001,29609379,29608733,29607218,29607004,29606484,29605696,29604988,29604637,29603716	Gene ID= ENSG00000204681.10 TPM= 5.45 Transcript Type= protein_coding
chr6	29602228	29633131	29602228	29633131	-	ENST00000472823.5@GABBR1	ENST00000472823.5	protein_coding	29632850,29632301,29631396,29629087,29627486,29623890,29623305,29622104,29621752,29621101,29613243,29612551,29610924,29608601,29607102,29606897,29606391,29605569,29604860,29604494,29602228	29633131,29632385,29631599,29629247,29627646,29624024,29623475,29622205,29621817,29621292,29613485,29612614,29611001,29608733,29607218,29607004,29606484,29605696,29604988,29604637,29603716	Gene ID= ENSG00000204681.10 TPM= 14.79 Transcript Type= nonsense_mediated_decay
chr6	29602238	29627785	29602238	29627785	-	transcript1147.chr6.nic@GABBR1	transcript1147.chr6.nic	protein_coding	29627486,29623890,29623305,29622104,29621752,29621101,29613243,29612551,29610924,29608601,29607102,29606897,29606391,29605569,29604860,29604494,29602238	29627785,29624024,29623475,29622205,29621817,29621292,29613485,29612614,29611001,29608733,29607218,29607004,29606484,29605696,29604988,29604637,29603716	Gene ID= ENSG00000204681.10 TPM= 22.97 Transcript Type= NA
chr6	29628199	29629828	29628199	29629828	+	transcript1152.chr6.nnic@NA	transcript1152.chr6.nnic	NA	29628199	29629828	Gene ID= novel_gene_chr6_1153 TPM= 28.02 Transcript Type= NA
chr6	29722850	29726525	29722850	29726525	+	transcript1156.chr6.nic@HLA-F	transcript1156.chr6.nic	protein_coding	29722850,29724190,29725031,29725447,29726011,29726403	29723927,29724448,29725306,29725563,29726043,29726525	Gene ID= ENSG00000204642.13 TPM= 10.51 Transcript Type= NA
chr6	29722775	29726526	29722775	29726526	+	ENST00000376861.5@HLA-F	ENST00000376861.5	protein_coding	29722775,29723306,29723658,29724173,29725031,29725447,29726011,29726403	29723000,29723527,29723927,29724448,29725306,29725563,29726043,29726526	Gene ID= ENSG00000204642.13 TPM= 56.04 Transcript Type= protein_coding
chr6	29723464	29726526	29723464	29726526	+	ENST00000434407.6@HLA-F	ENST00000434407.6	protein_coding	29723464,29723658,29724173,29725447,29726011,29726403	29723527,29723927,29724448,29725563,29726043,29726526	Gene ID= ENSG00000204642.13 TPM= 1.17 Transcript Type= protein_coding
chr6	29724157	29726526	29724157	29726526	+	ENST00000484704.5@HLA-F	ENST00000484704.5	protein_coding	29724157,29725031,29725447,29726011	29724448,29725306,29725563,29726526	Gene ID= ENSG00000204642.13 TPM= 2.34 Transcript Type= processed_transcript
chr6	29752743	29764290	29752743	29764290	+	transcript1164.chr6.nnic@NA	transcript1164.chr6.nnic	NA	29752743,29761774	29752927,29764290	Gene ID= novel_gene_chr6_1165 TPM= 4.67 Transcript Type= NA
chr6	29790812	29797809	29790812	29797809	+	transcript1167.chr6.nnic@HLA-V	transcript1167.chr6.nnic	transcribed_unprocessed_pseudogene	29790812,29791707,29792225,29792437,29795762,29797193	29790873,29791774,29792305,29792886,29795904,29797809	Gene ID= ENSG00000181126.13 TPM= 2.34 Transcript Type= NA
chr6	29791030	29792884	29791030	29792884	-	transcript1169.chr6.nnic@NA	transcript1169.chr6.nnic	NA	29791030	29792884	Gene ID= novel_gene_chr6_1170 TPM= 5.84 Transcript Type= NA
chr6	29827821	29831125	29827821	29831125	+	ENST00000360323.10@HLA-G	ENST00000360323.10	protein_coding	29827821,29828047,29828543,29829418,29829816,29830378,29830768	29827917,29828316,29828818,29829693,29829932,29830410,29831125	Gene ID= ENSG00000204632.11 TPM= 8.17 Transcript Type= protein_coding
chr6	29941260	29945884	29941260	29945884	+	ENST00000396634.5@HLA-A	ENST00000396634.5	protein_coding	29941260,29941966,29942404,29942757,29943268,29944122,29944500,29945059,29945234,29945451	29941319,29942096,29942626,29943026,29943543,29944397,29944616,29945091,29945281,29945884	Gene ID= ENSG00000206503.12 TPM= 1209.04 Transcript Type= protein_coding
chr6	29942552	29945884	29942552	29945884	+	ENST00000495183.5@HLA-A	ENST00000495183.5	protein_coding	29942552,29942757,29944122,29944500,29945063,29945234,29945451	29942626,29943543,29944397,29944616,29945091,29945281,29945884	Gene ID= ENSG00000206503.12 TPM= 8.76 Transcript Type= retained_intron
chr6	30012097	30061160	30012097	30061160	-	transcript1211.chr6.nnic@ZNRD1ASP	transcript1211.chr6.nnic	transcribed_unitary_pseudogene	30061079,30060741,30058115,30035916,30034908,30021667,30012097	30061160,30060995,30058190,30035983,30035110,30021761,30013557	Gene ID= ENSG00000204623.9 TPM= 3.5 Transcript Type= NA
chr6	30061259	30064909	30061259	30064909	+	ENST00000359374.8@ZNRD1	ENST00000359374.8	protein_coding	30061259,30061515,30061917,30062224,30064673	30061398,30061669,30062017,30062333,30064909	Gene ID= ENSG00000066379.14 TPM= 11.09 Transcript Type= protein_coding
chr6	30061254	30064909	30061254	30064909	+	ENST00000332435.9@ZNRD1	ENST00000332435.9	protein_coding	30061254,30061917,30062224,30064673	30061669,30062017,30062333,30064909	Gene ID= ENSG00000066379.14 TPM= 4.09 Transcript Type= protein_coding
chr6	30058899	30064909	30058899	30064909	+	ENST00000471008.5@ZNRD1	ENST00000471008.5	protein_coding	30058899,30064673	30062333,30064909	Gene ID= ENSG00000066379.14 TPM= 1.17 Transcript Type= retained_intron
chr6	30067205	30070333	30067205	30070333	+	ENST00000376769.6@PPP1R11	ENST00000376769.6	protein_coding	30067205,30068279,30068590,30069104	30067479,30068353,30068698,30070333	Gene ID= ENSG00000204619.7 TPM= 5.45 Transcript Type= protein_coding
chr6	30067088	30070333	30067088	30070333	+	ENST00000376772.7@PPP1R11	ENST00000376772.7	protein_coding	30067088,30068590,30069104	30067479,30068698,30070333	Gene ID= ENSG00000204619.7 TPM= 142.06 Transcript Type= protein_coding
chr6	30070266	30075887	30070266	30075887	-	ENST00000244360.6@RNF39	ENST00000244360.6	protein_coding	30075223,30073456,30073157,30070266	30075887,30073478,30073248,30071691	Gene ID= ENSG00000204618.8 TPM= 2.34 Transcript Type= protein_coding
chr6	30151945	30160934	30151945	30160934	-	ENST00000449742.6@TRIM10	ENST00000449742.6	protein_coding	30160430,30159150,30158399,30157369,30156939,30155727,30151945	30160934,30159245,30158629,30157391,30157054,30155759,30154486	Gene ID= ENSG00000204613.10 TPM= 1.17 Transcript Type= protein_coding
chr6	30184455	30213375	30184455	30213375	-	transcript1230.chr6.nnic@TRIM26	transcript1230.chr6.nnic	protein_coding	30213305,30204656,30201035,30198666,30198429,30196516,30190013,30189418,30189167,30184455	30213375,30204765,30201123,30199153,30198524,30196746,30190035,30189533,30189199,30186558	Gene ID= ENSG00000234127.8 TPM= 8.23 Transcript Type= NA
chr6	30184455	30213427	30184455	30213427	-	ENST00000453195.5@TRIM26	ENST00000453195.5	protein_coding	30213305,30201035,30198666,30198429,30196516,30190013,30189418,30189167,30184455	30213427,30201138,30199153,30198524,30196746,30190035,30189533,30189199,30186558	Gene ID= ENSG00000234127.8 TPM= 14.65 Transcript Type= protein_coding
chr6	30184455	30213366	30184455	30213366	-	transcript1237.chr6.nnic@TRIM26	transcript1237.chr6.nnic	protein_coding	30213305,30204656,30201035,30198666,30198429,30190013,30189418,30189167,30184455	30213366,30204765,30201138,30199153,30198524,30190035,30189533,30189199,30186558	Gene ID= ENSG00000234127.8 TPM= 5.6 Transcript Type= NA
chr6	30184455	30213366	30184455	30213366	-	ENST00000454678.6@TRIM26	ENST00000454678.6	protein_coding	30213305,30204656,30201035,30198666,30198429,30196516,30190013,30189418,30189167,30184455	30213366,30204765,30201138,30199264,30198524,30196746,30190035,30189533,30189199,30186558	Gene ID= ENSG00000234127.8 TPM= 5.9 Transcript Type= protein_coding
chr6	30208517	30213428	30208517	30213428	-	transcript1241.chr6.nnic@NA	transcript1241.chr6.nnic	NA	30208517	30213428	Gene ID= novel_gene_chr6_1242 TPM= 12.84 Transcript Type= NA
chr6	30291006	30327150	30291006	30327150	-	ENST00000426882.5@HCG18	ENST00000426882.5	antisense_RNA	30326354,30296132,30291006	30327150,30296237,30294964	Gene ID= ENSG00000231074.8 TPM= 3.5 Transcript Type= antisense_RNA
chr6	30326844	30343728	30326844	30343728	+	ENST00000376656.8@TRIM39	ENST00000376656.8	protein_coding	30326844,30328889,30329311,30330781,30335745,30339908,30340272,30340505,30341712	30326995,30329041,30329770,30330876,30335975,30339930,30340361,30340620,30343728	Gene ID= ENSG00000204599.14 TPM= 2.63 Transcript Type= protein_coding
chr6	30326427	30343729	30326427	30343729	+	transcript1254.chr6.nnic@TRIM39	transcript1254.chr6.nnic	protein_coding	30326427,30328889,30329311,30330781,30335745,30339908,30340505,30341686	30326887,30329041,30329770,30330876,30335975,30339930,30340620,30343729	Gene ID= ENSG00000204599.14 TPM= 2.63 Transcript Type= NA
chr6	30326844	30343729	30326844	30343729	+	ENST00000396551.7@TRIM39	ENST00000396551.7	protein_coding	30326844,30328889,30329311,30330781,30335745,30339908,30340505,30341712	30326995,30329041,30329770,30330876,30335975,30339930,30340620,30343729	Gene ID= ENSG00000204599.14 TPM= 9.05 Transcript Type= protein_coding
chr6	30343478	30346854	30343478	30346854	+	transcript1332.chr6.nic@TRIM39-RPP21	transcript1332.chr6.nic	protein_coding	30343478,30346713	30346557,30346854	Gene ID= ENSG00000248167.7 TPM= 2.34 Transcript Type= NA
chr6	30345142	30346857	30345142	30346857	+	ENST00000498414.5@RPP21	ENST00000498414.5	protein_coding	30345142,30345298,30346713	30345228,30346557,30346857	Gene ID= ENSG00000241370.5 TPM= 2.34 Transcript Type= retained_intron
chr6	30345155	30346857	30345155	30346857	+	ENST00000473266.1@RPP21	ENST00000473266.1	protein_coding	30345155,30345298,30346432,30346713	30345228,30345573,30346557,30346857	Gene ID= ENSG00000241370.5 TPM= 4.09 Transcript Type= retained_intron
chr6	30345169	30346857	30345169	30346857	+	ENST00000436442.2@RPP21	ENST00000436442.2	protein_coding	30345169,30345298,30345491,30346432,30346713	30345228,30345398,30345573,30346564,30346857	Gene ID= ENSG00000241370.5 TPM= 2.34 Transcript Type= protein_coding
chr6	30345131	30346857	30345131	30346857	+	ENST00000433076.6@RPP21	ENST00000433076.6	protein_coding	30345131,30345298,30345467,30346432,30346713	30345228,30345398,30345573,30346557,30346857	Gene ID= ENSG00000241370.5 TPM= 1.75 Transcript Type= protein_coding
chr6	30489467	30494205	30489467	30494205	+	ENST00000376630.4@HLA-E	ENST00000376630.4	protein_coding	30489467,30489726,30490240,30491137,30491537,30492404,30492541,30492749	30489595,30489995,30490515,30491412,30491653,30492436,30492583,30494205	Gene ID= ENSG00000204592.8 TPM= 2364.33 Transcript Type= protein_coding
chr6	30545964	30556122	30545964	30556122	-	transcript1367.chr6.nic@GNL1	transcript1367.chr6.nic	protein_coding	30555555,30555055,30554764,30554575,30553350,30553084,30552467,30547352,30547112,30546696,30545964	30556122,30555191,30554915,30554646,30553557,30553179,30552661,30547530,30547274,30546836,30546313	Gene ID= ENSG00000204590.12 TPM= 31.53 Transcript Type= NA
chr6	30556886	30563723	30556886	30563723	+	ENST00000376560.7@PRR3	ENST00000376560.7	protein_coding	30556886,30558150,30561834,30562389	30557450,30558212,30562124,30563723	Gene ID= ENSG00000204576.11 TPM= 2.34 Transcript Type= protein_coding
chr6	30571376	30591532	30571376	30591532	+	ENST00000326195.12@ABCF1	ENST00000326195.12	protein_coding	30571376,30577409,30577818,30578076,30578348,30578470,30579931,30580406,30582394,30583066,30583608,30583805,30584192,30584418,30585260,30585558,30585879,30586134,30586474,30586641,30589688,30589806,30590149,30590306,30590535	30571560,30577455,30577913,30578202,30578385,30578577,30580005,30580519,30582507,30583188,30583708,30583890,30584331,30584566,30585343,30585682,30585991,30586305,30586548,30586711,30589720,30589974,30590213,30590378,30591532	Gene ID= ENSG00000204574.12 TPM= 11.68 Transcript Type= protein_coding
chr6	30600400	30617244	30600400	30617244	-	ENST00000376511.6@PPP1R10	ENST00000376511.6	protein_coding	30617224,30616478,30609838,30609077,30608779,30607840,30606779,30606468,30606138,30605923,30604994,30604588,30604353,30604008,30603780,30603472,30603210,30602846,30601936,30600400	30617244,30616998,30609955,30609163,30608914,30607891,30606856,30606641,30606243,30606035,30605094,30604735,30604511,30604254,30603843,30603666,30603285,30602959,30602691,30601658	Gene ID= ENSG00000204569.9 TPM= 31.53 Transcript Type= protein_coding
chr6	30615832	30617246	30615832	30617246	-	transcript1386.chr6.nic@PPP1R10	transcript1386.chr6.nic	protein_coding	30617224,30615832	30617246,30616998	Gene ID= ENSG00000204569.9 TPM= 2.34 Transcript Type= NA
chr6	30614964	30615229	30614964	30615229	+	transcript1389.chr6.nnic@NA	transcript1389.chr6.nnic	NA	30614964	30615229	Gene ID= novel_gene_chr6_1390 TPM= 2.34 Transcript Type= NA
chr6	30617709	30626395	30617709	30626395	+	ENST00000259873.4@MRPS18B	ENST00000259873.4	protein_coding	30617709,30619493,30619709,30619921,30622832,30624883,30625502	30617943,30619601,30619806,30619989,30622898,30624942,30626395	Gene ID= ENSG00000204568.11 TPM= 107.42 Transcript Type= protein_coding
chr6	30617829	30626395	30617829	30626395	+	transcript1405.chr6.nnic@MRPS18B	transcript1405.chr6.nnic	protein_coding	30617829,30619493,30619709,30619921,30624883,30625502	30617943,30619601,30619806,30619989,30624942,30626395	Gene ID= ENSG00000204568.11 TPM= 19.85 Transcript Type= NA
chr6	30626876	30644679	30626876	30644679	+	ENST00000376483.8@ATAT1	ENST00000376483.8	protein_coding	30626876,30627460,30627636,30627851,30628032,30628329,30640377,30640535,30642176,30642768	30626992,30627520,30627727,30627911,30628145,30628430,30640422,30640603,30642247,30644679	Gene ID= ENSG00000137343.17 TPM= 3.5 Transcript Type= protein_coding
chr6	30626856	30646823	30626856	30646823	+	ENST00000376485.8@ATAT1	ENST00000376485.8	protein_coding	30626856,30627460,30627636,30627851,30628032,30628329,30640377,30640535,30642176,30642768,30645895,30646067,30646469	30626992,30627520,30627727,30627911,30628145,30628430,30640422,30640603,30642247,30643011,30645974,30646109,30646823	Gene ID= ENSG00000137343.17 TPM= 2.34 Transcript Type= protein_coding
chr6	30647055	30653109	30647055	30653109	+	ENST00000488383.5@C6orf136	ENST00000488383.5	protein_coding	30647055,30649558,30650994,30651266,30652648,30652802	30647303,30649959,30651100,30651466,30652717,30653109	Gene ID= ENSG00000204564.11 TPM= 8.17 Transcript Type= nonsense_mediated_decay
chr6	30647073	30653210	30647073	30653210	+	ENST00000376473.9@C6orf136	ENST00000376473.9	protein_coding	30647073,30649558,30650994,30651266,30652648,30652802	30647303,30649959,30651082,30651466,30652717,30653210	Gene ID= ENSG00000204564.11 TPM= 3.5 Transcript Type= protein_coding
chr6	30647421	30653109	30647421	30653109	+	ENST00000446773.6@C6orf136	ENST00000446773.6	protein_coding	30647421,30649558,30650994,30651266,30652648,30652802	30647846,30649959,30651082,30651466,30652717,30653109	Gene ID= ENSG00000204564.11 TPM= 4.67 Transcript Type= protein_coding
chr6	30653119	30673023	30653119	30673023	-	transcript1391.chr6.nnic@DHX16	transcript1391.chr6.nnic	protein_coding	30672635,30671036,30670790,30670410,30665479,30665071,30664801,30662911,30662627,30661756,30660032,30659736,30659472,30656952,30656597,30656391,30656198,30655435,30655175,30654706,30653119	30673023,30671274,30670952,30670466,30665733,30665274,30664992,30663021,30662742,30662431,30660242,30659834,30659624,30657092,30656759,30656509,30656265,30655597,30655336,30654879,30653370	Gene ID= ENSG00000204560.9 TPM= 9.34 Transcript Type= NA
chr6	30653119	30673037	30653119	30673037	-	ENST00000376442.7@DHX16	ENST00000376442.7	protein_coding	30672635,30671036,30670790,30670410,30665479,30665071,30664801,30662911,30662627,30660032,30659736,30659472,30656952,30656597,30656391,30656198,30655435,30655175,30654706,30653119	30673037,30671274,30670952,30670466,30665733,30665274,30664992,30663021,30662742,30660242,30659834,30659624,30657092,30656759,30656509,30656265,30655597,30655336,30654879,30653370	Gene ID= ENSG00000204560.9 TPM= 33.86 Transcript Type= protein_coding
chr6	30676389	30687895	30676389	30687895	-	ENST00000274853.7@PPP1R18	ENST00000274853.7	protein_coding	30684408,30679179,30676389	30687895,30679389,30677288	Gene ID= ENSG00000146112.11 TPM= 15.18 Transcript Type= protein_coding
chr6	30676389	30687216	30676389	30687216	-	ENST00000399199.7@PPP1R18	ENST00000399199.7	protein_coding	30687114,30684408,30679179,30676389	30687216,30686046,30679389,30677288	Gene ID= ENSG00000146112.11 TPM= 35.03 Transcript Type= protein_coding
chr6	30720201	30725426	30720201	30725426	+	ENST00000327892.12@TUBB	ENST00000327892.12	protein_coding	30720201,30722537,30722918,30723340	30720563,30722645,30723028,30725426	Gene ID= ENSG00000196230.12 TPM= 793.38 Transcript Type= protein_coding
chr6	30721574	30725426	30721574	30725426	+	ENST00000330914.7@TUBB	ENST00000330914.7	protein_coding	30721574,30722537,30722918,30723340	30721898,30722645,30723028,30725426	Gene ID= ENSG00000196230.12 TPM= 44.95 Transcript Type= protein_coding
chr6	30727830	30742738	30727830	30742738	-	transcript1440.chr6.nic@FLOT1	transcript1440.chr6.nic	protein_coding	30742527,30742147,30741792,30741190,30740679,30740496,30740158,30730919,30730682,30730428,30730022,30727830	30742738,30742203,30741867,30741333,30740798,30740591,30740310,30731100,30730727,30730565,30730186,30728145	Gene ID= ENSG00000137312.14 TPM= 18.68 Transcript Type= NA
chr6	30727709	30742733	30727709	30742733	-	ENST00000376389.7@FLOT1	ENST00000376389.7	protein_coding	30742527,30742147,30741792,30741614,30741190,30740679,30740496,30740158,30730919,30730682,30730428,30730022,30727709	30742733,30742203,30741867,30741704,30741333,30740798,30740591,30740310,30731100,30730727,30730565,30730186,30728145	Gene ID= ENSG00000137312.14 TPM= 54.88 Transcript Type= protein_coding
chr6	30743199	30744554	30743199	30744554	-	ENST00000259874.5@IER3	ENST00000259874.5	protein_coding	30744309,30743199	30744554,30744196	Gene ID= ENSG00000137331.11 TPM= 15.18 Transcript Type= protein_coding
chr6	30743199	30744548	30743199	30744548	-	ENST00000376377.2@IER3	ENST00000376377.2	protein_coding	30743199	30744548	Gene ID= ENSG00000137331.11 TPM= 7.01 Transcript Type= protein_coding
chr6	30884205	30900156	30884205	30900156	+	transcript1475.chr6.nic@DDR1	transcript1475.chr6.nic	protein_coding	30884205,30885625,30888688,30888908,30889202,30890973,30891380,30892002,30892296,30893068,30893272,30894506,30896621,30897014,30897379,30898073,30898888,30899156	30884710,30885680,30888814,30889010,30889430,30891120,30891479,30892188,30892542,30893163,30893423,30894671,30896865,30897141,30897597,30898307,30899037,30900156	Gene ID= ENSG00000204580.13 TPM= 23.55 Transcript Type= NA
chr6	30884450	30900156	30884450	30900156	+	transcript1479.chr6.nic@DDR1	transcript1479.chr6.nic	protein_coding	30884450,30888688,30888908,30889202,30890973,30891380,30892002,30892296,30893068,30893272,30894506,30896621,30897014,30897379,30898073,30898888,30899156	30884710,30888814,30889010,30889430,30891120,30891479,30892188,30892542,30893163,30893423,30894671,30896865,30897141,30897597,30898307,30899037,30900156	Gene ID= ENSG00000204580.13 TPM= 23.55 Transcript Type= NA
chr6	30884458	30900153	30884458	30900153	+	ENST00000376568.7@DDR1	ENST00000376568.7	protein_coding	30884458,30888688,30888908,30889202,30890973,30891380,30892002,30892296,30893068,30893272,30894506,30895404,30896621,30897014,30897379,30898073,30898888,30899156	30884710,30888814,30889010,30889430,30891120,30891479,30892188,30892542,30893163,30893423,30894671,30895514,30896865,30897141,30897597,30898307,30899037,30900153	Gene ID= ENSG00000204580.13 TPM= 29.97 Transcript Type= protein_coding
chr6	30889613	30892750	30889613	30892750	-	transcript1484.chr6.nnic@NA	transcript1484.chr6.nnic	NA	30889613	30892750	Gene ID= novel_gene_chr6_1485 TPM= 2.34 Transcript Type= NA
chr6	30908171	30914106	30908171	30914106	+	transcript1500.chr6.nic@GTF2H4	transcript1500.chr6.nic	protein_coding	30908171,30909034,30909435,30909932,30910665,30910853,30911158,30911431,30911684,30912014,30913110,30913309,30913811	30908403,30909173,30909539,30910063,30910761,30910941,30911269,30911499,30911767,30912458,30913157,30913387,30914106	Gene ID= ENSG00000213780.10 TPM= 2.72 Transcript Type= NA
chr6	30908184	30914106	30908184	30914106	+	ENST00000259895.8@GTF2H4	ENST00000259895.8	protein_coding	30908184,30909034,30909435,30909932,30910665,30910853,30911158,30911431,30911684,30912014,30912328,30913110,30913309,30913811	30908403,30909173,30909539,30910063,30910761,30910941,30911269,30911499,30911767,30912146,30912458,30913157,30913387,30914106	Gene ID= ENSG00000213780.10 TPM= 1.55 Transcript Type= protein_coding
chr6	30914238	30926459	30914238	30926459	+	transcript1488.chr6.nic@VARS2	transcript1488.chr6.nic	protein_coding	30914238,30914805,30915156,30915355,30915746,30915981,30916152,30916878,30917105,30917695,30918827,30919758,30920089,30920333,30920668,30921065,30921230,30921589,30921925,30922116,30922450,30922706,30922898,30923104,30923353,30924354,30925274,30925544,30925880,30926109	30914344,30915037,30915237,30915455,30915867,30916047,30916249,30916959,30917224,30917806,30918915,30919848,30920216,30920436,30920749,30921141,30921305,30921691,30921995,30922241,30922554,30922774,30922976,30923231,30923505,30924560,30925385,30925719,30926008,30926459	Gene ID= ENSG00000137411.16 TPM= 22.48 Transcript Type= NA
chr6	30914205	30926459	30914205	30926459	+	ENST00000321897.9@VARS2	ENST00000321897.9	protein_coding	30914205,30915156,30915355,30915746,30915981,30916152,30916878,30917105,30917695,30918827,30919758,30920089,30920333,30920668,30921065,30921230,30921589,30921925,30922116,30922450,30922706,30922898,30923104,30923353,30924354,30925274,30925544,30925880,30926109	30915037,30915237,30915455,30915867,30916047,30916249,30916959,30917224,30917806,30918915,30919848,30920216,30920436,30920749,30921141,30921305,30921691,30921995,30922241,30922554,30922774,30922976,30923231,30923505,30924560,30925385,30925719,30926008,30926459	Gene ID= ENSG00000137411.16 TPM= 11.97 Transcript Type= protein_coding
chr6	30915721	30926459	30915721	30926459	+	transcript1494.chr6.nic@VARS2	transcript1494.chr6.nic	protein_coding	30915721,30915981,30916152,30916878,30917105,30917695,30918827,30919758,30920089,30920333,30920668,30921065,30921230,30921589,30921925,30922116,30922450,30922706,30922898,30923104,30923353,30924354,30925274,30925544,30925880,30926109	30915867,30916047,30916249,30916959,30917224,30917806,30918915,30919848,30920216,30920436,30920749,30921141,30921305,30921691,30921995,30922241,30922554,30922774,30922976,30923231,30923505,30924560,30925385,30925719,30926008,30926459	Gene ID= ENSG00000137411.16 TPM= 7.88 Transcript Type= NA
chr6	30908242	30926459	30908242	30926459	+	ENST00000477288.5@VARS2	ENST00000477288.5	protein_coding	30908242,30909034,30909435,30909932,30910665,30910853,30911158,30911431,30911684,30912014,30913110,30913309,30913811,30915156,30915355,30915746,30915981,30916152,30916878,30917105,30917695,30918827,30919758,30920089,30920333,30920668,30921065,30921230,30921589,30921925,30922116,30922450,30922706,30922898,30923104,30923353,30924354,30925274,30925544,30925880,30926109	30908403,30909173,30909539,30910063,30910761,30910941,30911269,30911499,30911767,30912458,30913157,30913387,30915037,30915237,30915455,30915867,30916047,30916249,30916984,30917224,30917806,30918915,30919848,30920216,30920436,30920749,30921141,30921305,30921691,30921995,30922241,30922554,30922774,30922976,30923231,30923505,30924560,30925385,30925719,30926008,30926459	Gene ID= ENSG00000137411.16 TPM= 4.76 Transcript Type= retained_intron
chr6	30914331	30926413	30914331	30926413	+	ENST00000541562.5@VARS2	ENST00000541562.5	protein_coding	30914331,30914805,30915156,30915355,30915746,30915981,30916152,30916878,30917105,30917695,30918827,30919758,30920089,30920333,30920668,30921065,30921230,30921589,30921925,30922116,30922450,30922706,30922898,30923104,30923353,30924354,30925274,30925544,30925880,30926109	30914469,30915037,30915237,30915455,30915867,30916047,30916249,30916959,30917224,30917806,30918915,30919848,30920216,30920436,30920749,30921141,30921305,30921691,30921995,30922241,30922554,30922774,30922976,30923231,30923505,30924560,30925385,30925719,30926008,30926413	Gene ID= ENSG00000137411.16 TPM= 3.5 Transcript Type= protein_coding
chr6	30931353	30937477	30931353	30937477	-	transcript1507.chr6.nnic@SFTA2	transcript1507.chr6.nnic	protein_coding	30937170,30933891,30931707,30931353	30937477,30934069,30931795,30931574	Gene ID= ENSG00000196260.4 TPM= 5.84 Transcript Type= NA
chr6	30931353	30932175	30931353	30932175	-	ENST00000359086.3@SFTA2	ENST00000359086.3	protein_coding	30932036,30931707,30931353	30932175,30931795,30931574	Gene ID= ENSG00000196260.4 TPM= 134.47 Transcript Type= protein_coding
chr6	30931353	30937477	30931353	30937477	-	transcript1512.chr6.nnic@SFTA2	transcript1512.chr6.nnic	protein_coding	30937170,30931707,30931353	30937477,30931795,30931574	Gene ID= ENSG00000196260.4 TPM= 18.88 Transcript Type= NA
chr6	30931354	30937475	30931354	30937475	-	transcript1515.chr6.nnic@SFTA2	transcript1515.chr6.nnic	protein_coding	30937170,30931354	30937475,30931574	Gene ID= ENSG00000196260.4 TPM= 4.09 Transcript Type= NA
chr6	30931353	30932109	30931353	30932109	-	ENST00000474914.1@SFTA2	ENST00000474914.1	protein_coding	30931707,30931353	30932109,30931574	Gene ID= ENSG00000196260.4 TPM= 27.05 Transcript Type= retained_intron
chr6	30935313	30938790	30935313	30938790	+	transcript1503.chr6.nnic@DPCR1	transcript1503.chr6.nnic	protein_coding	30935313,30936224,30938069,30938298,30938641	30935615,30937301,30938183,30938513,30938790	Gene ID= ENSG00000168631.12 TPM= 4.67 Transcript Type= NA
chr6	31114751	31140038	31114751	31140038	+	transcript1519.chr6.nnic@PSORS1C1	transcript1519.chr6.nnic	protein_coding	31114751,31125739,31129569,31138359,31139641	31114891,31125839,31129645,31138459,31140038	Gene ID= ENSG00000204540.10 TPM= 3.5 Transcript Type= NA
chr6	31114831	31140038	31114831	31140038	+	ENST00000479581.5@PSORS1C1	ENST00000479581.5	protein_coding	31114831,31139641	31114891,31140038	Gene ID= ENSG00000204540.10 TPM= 1.17 Transcript Type= processed_transcript
chr6	31138657	31140037	31138657	31140037	+	transcript1522.chr6.nnic@NA	transcript1522.chr6.nnic	NA	31138657	31140037	Gene ID= novel_gene_chr6_1523 TPM= 2.34 Transcript Type= NA
chr6	31142439	31158238	31142439	31158238	-	ENST00000376266.9@CCHCR1	ENST00000376266.9	protein_coding	31158167,31157023,31156731,31154496,31150959,31150725,31150455,31150066,31148618,31148405,31145696,31145448,31145166,31144885,31144687,31143262,31142963,31142439	31158238,31157089,31156944,31154799,31151122,31150860,31150565,31150215,31148728,31148511,31145808,31145493,31145302,31145073,31144788,31143413,31143134,31142716	Gene ID= ENSG00000204536.13 TPM= 10.51 Transcript Type= protein_coding
chr6	31148860	31155611	31148860	31155611	-	transcript1534.chr6.nic@CCHCR1	transcript1534.chr6.nic	protein_coding	31154496,31150959,31150725,31150455,31148860	31155611,31151122,31150860,31150565,31150215	Gene ID= ENSG00000204536.13 TPM= 2.34 Transcript Type= NA
chr6	31158531	31164215	31158531	31164215	+	transcript1537.chr6.nnic@TCF19	transcript1537.chr6.nnic	protein_coding	31158531,31158897,31159143,31161447,31162477	31158722,31159035,31159707,31162005,31164215	Gene ID= ENSG00000137310.11 TPM= 3.5 Transcript Type= NA
chr6	31158547	31164215	31158547	31164215	+	ENST00000376255.4@TCF19	ENST00000376255.4	protein_coding	31158547,31159143,31161447,31162477	31158722,31159707,31162005,31164215	Gene ID= ENSG00000137310.11 TPM= 2.34 Transcript Type= protein_coding
chr6	31158505	31164215	31158505	31164215	+	transcript1547.chr6.nic@TCF19	transcript1547.chr6.nic	protein_coding	31158505,31161447,31162477	31159707,31162005,31164215	Gene ID= ENSG00000137310.11 TPM= 7.01 Transcript Type= NA
chr6	31158542	31164215	31158542	31164215	+	ENST00000376257.7@TCF19	ENST00000376257.7	protein_coding	31158542,31158897,31161447,31162477	31158722,31159707,31162005,31164215	Gene ID= ENSG00000137310.11 TPM= 2.34 Transcript Type= protein_coding
chr6	31182510	31186531	31182510	31186531	-	transcript1550.chr6.nnic@NA	transcript1550.chr6.nnic	NA	31182510	31186531	Gene ID= novel_gene_chr6_1551 TPM= 3.5 Transcript Type= NA
chr6	31195200	31198037	31195200	31198037	-	ENST00000606367.1@AL662844.4	ENST00000606367.1	antisense_RNA	31195200	31198037	Gene ID= ENSG00000272501.1 TPM= 8.17 Transcript Type= antisense_RNA
chr6	31268749	31272086	31268749	31272086	-	ENST00000376228.9@HLA-C	ENST00000376228.9	protein_coding	31271999,31271599,31271073,31270210,31269966,31269493,31269338,31268749	31272086,31271868,31271348,31270485,31270085,31269525,31269385,31269173	Gene ID= ENSG00000204525.16 TPM= 3859.25 Transcript Type= protein_coding
chr6	31268749	31272050	31268749	31272050	-	ENST00000487245.5@HLA-C	ENST00000487245.5	protein_coding	31271073,31270210,31269966,31269493,31269338,31268749	31272050,31270485,31270085,31269525,31269385,31269173	Gene ID= ENSG00000204525.16 TPM= 89.54 Transcript Type= retained_intron
chr6	31268749	31272086	31268749	31272086	-	ENST00000383329.7@HLA-C	ENST00000383329.7	protein_coding	31271999,31271599,31271073,31270210,31269966,31269493,31269338,31268749	31272086,31271868,31271348,31270485,31270085,31269543,31269385,31269173	Gene ID= ENSG00000204525.16 TPM= 235.59 Transcript Type= protein_coding
chr6	31353872	31357187	31353872	31357187	-	ENST00000412585.6@HLA-B	ENST00000412585.6	protein_coding	31357086,31356688,31356167,31355317,31355107,31354633,31354479,31353872	31357187,31356957,31356442,31355592,31355223,31354665,31354526,31354296	Gene ID= ENSG00000234745.10 TPM= 923.37 Transcript Type= protein_coding
chr6	31394307	31400654	31394307	31400654	-	transcript1614.chr6.nnic@AL645933.2	transcript1614.chr6.nnic	lincRNA	31400054,31394307	31400654,31395217	Gene ID= ENSG00000272221.1 TPM= 7.01 Transcript Type= NA
chr6	31399784	31415313	31399784	31415313	+	ENST00000616296.4@MICA	ENST00000616296.4	protein_coding	31399784,31410543,31411072,31411947,31412325,31415012	31400783,31410797,31411359,31412225,31412460,31415313	Gene ID= ENSG00000204520.12 TPM= 2.34 Transcript Type= protein_coding
chr6	31403579	31415315	31403579	31415315	+	ENST00000449934.6@MICA	ENST00000449934.6	protein_coding	31403579,31410543,31411072,31411947,31412325,31415012	31403702,31410797,31411359,31412225,31412460,31415315	Gene ID= ENSG00000204520.12 TPM= 2.92 Transcript Type= protein_coding
chr6	31410293	31415315	31410293	31415315	+	transcript1610.chr6.nic@MICA	transcript1610.chr6.nic	protein_coding	31410293,31411072,31411947,31412325,31415012	31410797,31411359,31412225,31412460,31415315	Gene ID= ENSG00000204520.12 TPM= 2.92 Transcript Type= NA
chr6	31410023	31415315	31410023	31415315	+	transcript1613.chr6.nic@MICA	transcript1613.chr6.nic	protein_coding	31410023,31411947,31412325,31415012	31411359,31412225,31412460,31415315	Gene ID= ENSG00000204520.12 TPM= 2.34 Transcript Type= NA
chr6	31402124	31405250	31402124	31405250	-	transcript1615.chr6.nnic@NA	transcript1615.chr6.nnic	NA	31402124	31405250	Gene ID= novel_gene_chr6_1616 TPM= 7.01 Transcript Type= NA
chr6	31400702	31465809	31400702	31465809	+	ENST00000414046.2@HCP5	ENST00000414046.2	sense_overlapping	31400702,31463123,31463371	31400763,31463279,31465809	Gene ID= ENSG00000206337.10 TPM= 4.67 Transcript Type= sense_overlapping
chr6	31463182	31465704	31463182	31465704	+	ENST00000541196.2@HCP5	ENST00000541196.2	sense_overlapping	31463182,31463371	31463279,31465704	Gene ID= ENSG00000206337.10 TPM= 16.35 Transcript Type= sense_overlapping
chr6	31494881	31511123	31494881	31511123	+	ENST00000538442.5@MICB	ENST00000538442.5	protein_coding	31494881,31505617,31506143,31507022,31507400,31509782	31494995,31505871,31506430,31507300,31507531,31511123	Gene ID= ENSG00000204516.9 TPM= 7.59 Transcript Type= protein_coding
chr6	31498115	31511124	31498115	31511124	+	ENST00000252229.6@MICB	ENST00000252229.6	protein_coding	31498115,31505617,31506143,31507022,31507400,31509782	31498263,31505871,31506430,31507300,31507531,31511124	Gene ID= ENSG00000204516.9 TPM= 1.75 Transcript Type= protein_coding
chr6	31530219	31542068	31530219	31542068	-	transcript1654.chr6.nic@DDX39B	transcript1654.chr6.nic	protein_coding	31541950,31540322,31539147,31538763,31536500,31534486,31532780,31531296,31531053,31530779,31530219	31542068,31540534,31539274,31538855,31536683,31535485,31532911,31531405,31531197,31530926,31530450	Gene ID= ENSG00000198563.13 TPM= 8.17 Transcript Type= NA
chr6	31530219	31542448	31530219	31542448	-	ENST00000458640.5@DDX39B	ENST00000458640.5	protein_coding	31541950,31540322,31539147,31538763,31536500,31535367,31532780,31531296,31531053,31530779,31530219	31542448,31540534,31539274,31538855,31536683,31535485,31532911,31531405,31531197,31530926,31530450	Gene ID= ENSG00000198563.13 TPM= 53.32 Transcript Type= protein_coding
chr6	31530219	31542017	31530219	31542017	-	ENST00000462256.5@DDX39B	ENST00000462256.5	protein_coding	31541950,31540322,31539147,31538763,31536500,31532780,31531296,31531053,31530779,31530219	31542017,31540534,31539274,31538855,31536683,31535485,31531405,31531197,31530926,31530450	Gene ID= ENSG00000198563.13 TPM= 30.36 Transcript Type= retained_intron
chr6	31544462	31546844	31544462	31546844	-	ENST00000303892.9@ATP6V1G2	ENST00000303892.9	protein_coding	31546478,31546109,31544462	31546844,31546209,31545581	Gene ID= ENSG00000213760.10 TPM= 2.34 Transcript Type= protein_coding
chr6	31546870	31558829	31546870	31558829	+	ENST00000376146.8@NFKBIL1	ENST00000376146.8	protein_coding	31546870,31548163,31557628,31558022	31546973,31548439,31557849,31558829	Gene ID= ENSG00000204498.10 TPM= 1.55 Transcript Type= protein_coding
chr6	31547581	31558829	31547581	31558829	+	ENST00000376148.8@NFKBIL1	ENST00000376148.8	protein_coding	31547581,31548163,31557628,31558022	31547751,31548439,31557849,31558829	Gene ID= ENSG00000204498.10 TPM= 21.4 Transcript Type= protein_coding
chr6	31547613	31558829	31547613	31558829	+	ENST00000376145.8@NFKBIL1	ENST00000376145.8	protein_coding	31547613,31548163,31557628,31558022	31547751,31548439,31557804,31558829	Gene ID= ENSG00000204498.10 TPM= 5.06 Transcript Type= protein_coding
chr6	31580555	31582427	31580555	31582427	-	ENST00000446745.2@LTB	ENST00000446745.2	protein_coding	31582256,31581559,31580555	31582427,31581630,31581163	Gene ID= ENSG00000227507.2 TPM= 3.5 Transcript Type= protein_coding
chr6	31580525	31582522	31580525	31582522	-	ENST00000483972.1@LTB	ENST00000483972.1	protein_coding	31582496,31581559,31580525	31582522,31581630,31581163	Gene ID= ENSG00000227507.2 TPM= 3.5 Transcript Type= processed_transcript
chr6	31580555	31582425	31580555	31582425	-	ENST00000429299.2@LTB	ENST00000429299.2	protein_coding	31582256,31581814,31581559,31580555	31582425,31581859,31581630,31581163	Gene ID= ENSG00000227507.2 TPM= 5.84 Transcript Type= protein_coding
chr6	31586179	31588909	31586179	31588909	+	ENST00000438075.6@LST1	ENST00000438075.6	protein_coding	31586179,31587200,31587641,31587944,31588518	31586315,31587318,31587733,31587966,31588909	Gene ID= ENSG00000204482.10 TPM= 3.5 Transcript Type= protein_coding
chr6	31586124	31588909	31586124	31588909	+	ENST00000418507.6@LST1	ENST00000418507.6	protein_coding	31586124,31587200,31587944,31588518	31586315,31587318,31587966,31588909	Gene ID= ENSG00000204482.10 TPM= 2.34 Transcript Type= protein_coding
chr6	31586220	31588757	31586220	31588757	+	ENST00000376110.7@LST1	ENST00000376110.7	protein_coding	31586220,31587200,31587944,31588563	31586315,31587318,31587966,31588757	Gene ID= ENSG00000204482.10 TPM= 5.84 Transcript Type= protein_coding
chr6	31586217	31588909	31586217	31588909	+	ENST00000376099.5@LST1	ENST00000376099.5	protein_coding	31586217,31587200,31588518	31586315,31587318,31588909	Gene ID= ENSG00000204482.10 TPM= 1.75 Transcript Type= protein_coding
chr6	31586217	31588909	31586217	31588909	+	ENST00000376096.5@LST1	ENST00000376096.5	protein_coding	31586217,31587200,31588563	31586315,31587318,31588909	Gene ID= ENSG00000204482.10 TPM= 4.67 Transcript Type= protein_coding
chr6	31587300	31588909	31587300	31588909	+	ENST00000396101.7@LST1	ENST00000396101.7	protein_coding	31587300,31587641,31588563	31587318,31587733,31588909	Gene ID= ENSG00000204482.10 TPM= 1.17 Transcript Type= protein_coding
chr6	31587022	31588909	31587022	31588909	+	ENST00000376090.6@LST1	ENST00000376090.6	protein_coding	31587022,31588518	31587318,31588909	Gene ID= ENSG00000204482.10 TPM= 1.75 Transcript Type= protein_coding
chr6	31587200	31588662	31587200	31588662	+	ENST00000376092.7@LST1	ENST00000376092.7	protein_coding	31587200,31588497	31587318,31588662	Gene ID= ENSG00000204482.10 TPM= 1.17 Transcript Type= protein_coding
chr6	31588895	31592985	31588895	31592985	-	ENST00000340027.9@NCR3	ENST00000340027.9	protein_coding	31592679,31589782,31589526,31588895	31592985,31590126,31589633,31589176	Gene ID= ENSG00000204475.9 TPM= 2.34 Transcript Type= protein_coding
chr6	31615184	31617021	31615184	31617021	+	ENST00000376059.7@AIF1	ENST00000376059.7	protein_coding	31615184,31615521,31615670,31616104,31616344,31616816	31615354,31615582,31615736,31616145,31616506,31617021	Gene ID= ENSG00000204472.12 TPM= 50.59 Transcript Type= protein_coding
chr6	31615227	31617021	31615227	31617021	+	ENST00000337917.11@AIF1	ENST00000337917.11	protein_coding	31615227,31615521,31615670,31616104,31616344,31616816	31615293,31615582,31615736,31616145,31616506,31617021	Gene ID= ENSG00000204472.12 TPM= 10.89 Transcript Type= protein_coding
chr6	31615280	31617021	31615280	31617021	+	ENST00000466820.1@AIF1	ENST00000466820.1	protein_coding	31615280,31615521,31615670,31616816	31615354,31615582,31616506,31617021	Gene ID= ENSG00000204472.12 TPM= 1.17 Transcript Type= retained_intron
chr6	31615991	31617021	31615991	31617021	+	ENST00000376049.4@AIF1	ENST00000376049.4	protein_coding	31615991,31616344,31616816	31616145,31616506,31617021	Gene ID= ENSG00000204472.12 TPM= 1.55 Transcript Type= protein_coding
chr6	31639029	31652389	31639029	31652389	-	transcript1623.chr6.nic@BAG6	transcript1623.chr6.nic	protein_coding	31652247,31651656,31649510,31649199,31648911,31648677,31647591,31646394,31645407,31644946,31644525,31644307,31644082,31643890,31642829,31642112,31641776,31641539,31641320,31641104,31640792,31640645,31640385,31640199,31639500,31639029	31652389,31651776,31649627,31649395,31648964,31648751,31647826,31646523,31645604,31645198,31644602,31644414,31644194,31643977,31643115,31642403,31641945,31641592,31641422,31641228,31640938,31640704,31640528,31640306,31639646,31639226	Gene ID= ENSG00000204463.12 TPM= 8.56 Transcript Type= NA
chr6	31639029	31652660	31639029	31652660	-	transcript1625.chr6.nic@BAG6	transcript1625.chr6.nic	protein_coding	31652424,31651656,31649510,31649199,31648911,31648677,31647591,31646394,31645407,31644946,31644525,31644307,31644082,31643890,31642829,31642112,31641776,31641539,31641320,31641104,31640792,31640645,31640385,31640199,31639500,31639029	31652660,31651776,31649627,31649395,31648964,31648751,31647826,31646523,31645604,31645198,31644602,31644414,31644194,31643977,31643115,31642403,31641945,31641592,31641422,31641228,31640938,31640704,31640528,31640306,31639646,31639226	Gene ID= ENSG00000204463.12 TPM= 10.31 Transcript Type= NA
chr6	31639028	31652393	31639028	31652393	-	ENST00000375976.8@BAG6	ENST00000375976.8	protein_coding	31652247,31651656,31649510,31649199,31648911,31648677,31647591,31646394,31645407,31644946,31644525,31644082,31643890,31642829,31642112,31641776,31641539,31641320,31641104,31640792,31640645,31640385,31640199,31639500,31639028	31652393,31651776,31649627,31649395,31648964,31648751,31647826,31646523,31645604,31645198,31644602,31644194,31643977,31643115,31642403,31641945,31641592,31641422,31641228,31640938,31640704,31640528,31640306,31639646,31639226	Gene ID= ENSG00000204463.12 TPM= 8.96 Transcript Type= protein_coding
chr6	31639029	31652660	31639029	31652660	-	transcript1632.chr6.nic@BAG6	transcript1632.chr6.nic	protein_coding	31652424,31651656,31649510,31649199,31648911,31648677,31647591,31646394,31645407,31644946,31644525,31644307,31644082,31643890,31642829,31642112,31641776,31641539,31641320,31641104,31640792,31640645,31640385,31640199,31639029	31652660,31651776,31649627,31649395,31648964,31648751,31647826,31646523,31645604,31645198,31644602,31644414,31644194,31643977,31643115,31642403,31641945,31641592,31641422,31641228,31640938,31640704,31640528,31640306,31639226	Gene ID= ENSG00000204463.12 TPM= 12.26 Transcript Type= NA
chr6	31639029	31652700	31639029	31652700	-	ENST00000362049.10@BAG6	ENST00000362049.10	protein_coding	31652424,31651656,31649510,31649199,31648911,31648677,31647591,31646394,31645407,31644946,31644525,31644082,31643890,31642829,31642112,31641776,31641539,31641320,31641104,31640792,31640645,31640385,31640199,31639029	31652700,31651776,31649627,31649395,31648964,31648751,31647826,31646523,31645604,31645198,31644602,31644194,31643977,31643115,31642403,31641945,31641592,31641422,31641228,31640938,31640704,31640528,31640306,31639226	Gene ID= ENSG00000204463.12 TPM= 14.21 Transcript Type= protein_coding
chr6	31639028	31641228	31639028	31641228	-	ENST00000441793.5@BAG6	ENST00000441793.5	protein_coding	31641104,31640792,31640645,31640385,31640199,31639028	31641228,31640938,31640704,31640528,31640306,31639226	Gene ID= ENSG00000204463.12 TPM= 3.5 Transcript Type= protein_coding
chr6	31639028	31652705	31639028	31652705	-	ENST00000211379.9@BAG6	ENST00000211379.9	protein_coding	31652424,31651656,31649510,31649199,31648911,31648677,31647591,31646394,31645407,31644946,31644525,31644082,31643890,31642829,31642112,31641776,31641539,31641320,31641104,31640792,31640645,31640385,31640199,31639500,31639028	31652705,31651776,31649627,31649395,31648964,31648751,31647826,31646523,31645604,31645198,31644602,31644194,31643977,31643115,31642403,31641945,31641592,31641422,31641228,31640938,31640704,31640528,31640306,31639646,31639226	Gene ID= ENSG00000204463.12 TPM= 16.54 Transcript Type= protein_coding
chr6	31658298	31660772	31658298	31660772	-	ENST00000375911.1@C6orf47	ENST00000375911.1	protein_coding	31658298	31660772	Gene ID= ENSG00000204439.3 TPM= 99.25 Transcript Type= protein_coding
chr6	31662076	31665861	31662076	31665861	-	ENST00000375900.8@GPANK1	ENST00000375900.8	protein_coding	31665574,31664841,31663853,31662076	31665861,31665003,31664580,31662710	Gene ID= ENSG00000204438.10 TPM= 16.73 Transcript Type= protein_coding
chr6	31661229	31666283	31661229	31666283	-	ENST00000375906.5@GPANK1	ENST00000375906.5	protein_coding	31665861,31664841,31663853,31661229	31666283,31665003,31664577,31662710	Gene ID= ENSG00000204438.10 TPM= 3.5 Transcript Type= protein_coding
chr6	31662076	31665390	31662076	31665390	-	ENST00000375896.8@GPANK1	ENST00000375896.8	protein_coding	31664841,31663853,31662076	31665390,31664577,31662710	Gene ID= ENSG00000204438.10 TPM= 6.81 Transcript Type= protein_coding
chr6	31662076	31665850	31662076	31665850	-	ENST00000375895.6@GPANK1	ENST00000375895.6	protein_coding	31665574,31664841,31663853,31662076	31665850,31665003,31664577,31662710	Gene ID= ENSG00000204438.10 TPM= 5.64 Transcript Type= protein_coding
chr6	31666064	31670070	31666064	31670070	+	ENST00000375882.6@CSNK2B	ENST00000375882.6	protein_coding	31666064,31666821,31667868,31668539,31669097,31669319,31669836	31666208,31666903,31667970,31668654,31669172,31669508,31670070	Gene ID= ENSG00000204435.13 TPM= 92.24 Transcript Type= protein_coding
chr6	31666067	31670070	31666067	31670070	+	transcript1719.chr6.nic@CSNK2B	transcript1719.chr6.nic	protein_coding	31666067,31666821,31667868,31668539,31669097,31669836	31666208,31666903,31667970,31668654,31669508,31670070	Gene ID= ENSG00000204435.13 TPM= 5.84 Transcript Type= NA
chr6	31676684	31681438	31676684	31681438	-	transcript1720.chr6.nnic@LY6G5C	transcript1720.chr6.nnic	protein_coding	31681181,31679101,31676684	31681438,31679268,31677120	Gene ID= ENSG00000204428.12 TPM= 2.34 Transcript Type= NA
chr6	31686949	31703444	31686949	31703444	-	ENST00000395952.7@ABHD16A	ENST00000395952.7	protein_coding	31703150,31702074,31701274,31700942,31696948,31693359,31693027,31691804,31691579,31690539,31690078,31689581,31689015,31688723,31688249,31688041,31687824,31687642,31687498,31686949	31703444,31702130,31701340,31701028,31697033,31693432,31693149,31691918,31691680,31690602,31690127,31689704,31689119,31688786,31688305,31688103,31687900,31687740,31687544,31687295	Gene ID= ENSG00000204427.11 TPM= 158.21 Transcript Type= protein_coding
chr6	31686959	31703337	31686959	31703337	-	transcript1729.chr6.nic@ABHD16A	transcript1729.chr6.nic	protein_coding	31703150,31700942,31696948,31693359,31693027,31691804,31691579,31690539,31690078,31689581,31689015,31688723,31688249,31688041,31687824,31687642,31687498,31686959	31703337,31701028,31697033,31693432,31693149,31691918,31691680,31690602,31690127,31689704,31689119,31688786,31688305,31688103,31687900,31687740,31687544,31687295	Gene ID= ENSG00000204427.11 TPM= 9.92 Transcript Type= NA
chr6	31686989	31703340	31686989	31703340	-	ENST00000495769.5@ABHD16A	ENST00000495769.5	protein_coding	31703150,31702074,31700942,31696948,31693359,31693027,31691804,31691579,31690539,31690078,31689581,31689015,31688723,31688249,31688041,31687824,31687642,31687498,31686989	31703340,31702130,31701028,31697033,31693432,31693149,31691918,31691680,31690602,31690127,31689704,31689119,31688786,31688305,31688103,31687900,31687740,31687544,31687295	Gene ID= ENSG00000204427.11 TPM= 7.01 Transcript Type= nonsense_mediated_decay
chr6	31727038	31730617	31727038	31730617	-	ENST00000375792.7@DDAH2	ENST00000375792.7	protein_coding	31730051,31728865,31728646,31728451,31728173,31727543,31727038	31730617,31729225,31728745,31728524,31728292,31727692,31727353	Gene ID= ENSG00000213722.8 TPM= 146.57 Transcript Type= protein_coding
chr6	31727038	31729792	31727038	31729792	-	ENST00000375789.6@DDAH2	ENST00000375789.6	protein_coding	31728865,31728646,31728451,31728173,31727543,31727038	31729792,31728745,31728524,31728292,31727692,31727353	Gene ID= ENSG00000213722.8 TPM= 44.99 Transcript Type= protein_coding
chr6	31727038	31730227	31727038	31730227	-	ENST00000480913.5@DDAH2	ENST00000480913.5	protein_coding	31730051,31728646,31728451,31728173,31727543,31727038	31730227,31728745,31728524,31728292,31727692,31727353	Gene ID= ENSG00000213722.8 TPM= 3.74 Transcript Type= processed_transcript
chr6	31730583	31736545	31730583	31736545	-	ENST00000616760.1@CLIC1	ENST00000616760.1	protein_coding	31736483,31736262,31734154,31733836,31733566,31732217,31730583	31736545,31736350,31734263,31733961,31733672,31732398,31731003	Gene ID= ENSG00000213719.8 TPM= 16.93 Transcript Type= protein_coding
chr6	31730581	31736567	31730581	31736567	-	ENST00000375784.7@CLIC1	ENST00000375784.7	protein_coding	31736262,31734154,31733836,31733566,31732217,31730581	31736567,31734263,31733961,31733672,31732398,31731003	Gene ID= ENSG00000213719.8 TPM= 431.43 Transcript Type= protein_coding
chr6	31777518	31795953	31777518	31795953	-	ENST00000375663.7@VARS	ENST00000375663.7	protein_coding	31795546,31794831,31792986,31792757,31792392,31792217,31791871,31791610,31785569,31785246,31784595,31784394,31784214,31783096,31782721,31782530,31782285,31782087,31781847,31781691,31781481,31781019,31780870,31780705,31780441,31779998,31779608,31779425,31778967,31777518	31795953,31795250,31793120,31792895,31792516,31792301,31791971,31791737,31785733,31785327,31784714,31784502,31784308,31783186,31782845,31782633,31782443,31782177,31781952,31781761,31781606,31781123,31780938,31780783,31780568,31780153,31779814,31779536,31779292,31777662	Gene ID= ENSG00000204394.12 TPM= 83.48 Transcript Type= protein_coding
chr6	31777518	31795761	31777518	31795761	-	transcript1767.chr6.nnic@VARS	transcript1767.chr6.nnic	protein_coding	31795546,31794831,31792986,31792757,31792392,31792217,31791871,31791610,31785569,31785246,31784595,31784394,31783096,31782721,31782530,31782285,31782087,31781847,31781691,31781481,31781019,31780870,31780705,31780441,31779998,31779608,31779425,31778967,31777518	31795761,31795250,31793120,31792895,31792516,31792301,31791971,31791737,31785733,31785327,31784714,31784502,31783186,31782845,31782633,31782443,31782177,31781952,31781761,31781606,31781123,31780938,31780783,31780568,31780153,31779814,31779536,31779292,31777662	Gene ID= ENSG00000204394.12 TPM= 13.43 Transcript Type= NA
chr6	31797396	31806984	31797396	31806984	-	ENST00000375661.5@LSM2	ENST00000375661.5	protein_coding	31806755,31806075,31798477,31797990,31797396	31806984,31806142,31798507,31798049,31797882	Gene ID= ENSG00000204392.10 TPM= 35.03 Transcript Type= protein_coding
chr6	31815464	31817946	31815464	31817946	+	ENST00000375651.6@HSPA1A	ENST00000375651.6	protein_coding	31815464	31817946	Gene ID= ENSG00000204389.9 TPM= 131.94 Transcript Type= protein_coding
chr6	31827735	31830255	31827735	31830255	+	ENST00000375650.4@HSPA1B	ENST00000375650.4	protein_coding	31827735	31830255	Gene ID= ENSG00000204388.6 TPM= 81.73 Transcript Type= protein_coding
chr6	31834918	31839761	31834918	31839761	+	ENST00000375642.6@C6orf48	ENST00000375642.6	protein_coding	31834918,31835411,31836299,31837236,31839543	31835200,31835451,31836517,31837435,31839761	Gene ID= ENSG00000204387.12 TPM= 1.17 Transcript Type= protein_coding
chr6	31834908	31839761	31834908	31839761	+	ENST00000375638.7@C6orf48	ENST00000375638.7	protein_coding	31834908,31835411,31836424,31837236,31839543	31835200,31835451,31836517,31837435,31839761	Gene ID= ENSG00000204387.12 TPM= 17.51 Transcript Type= protein_coding
chr6	31834608	31839761	31834608	31839761	+	ENST00000375640.7@C6orf48	ENST00000375640.7	protein_coding	31834608,31835411,31837236,31839543	31835200,31835451,31837435,31839761	Gene ID= ENSG00000204387.12 TPM= 45.54 Transcript Type= protein_coding
chr6	31834908	31839761	31834908	31839761	+	ENST00000375635.6@C6orf48	ENST00000375635.6	protein_coding	31834908,31835411,31837236,31839543	31835057,31835451,31837435,31839761	Gene ID= ENSG00000204387.12 TPM= 3.5 Transcript Type= protein_coding
chr6	31835288	31839764	31835288	31839764	+	ENST00000375633.5@C6orf48	ENST00000375633.5	protein_coding	31835288,31837236,31839543	31835451,31837435,31839764	Gene ID= ENSG00000204387.12 TPM= 4.67 Transcript Type= protein_coding
chr6	31835843	31836828	31835843	31836828	-	transcript1791.chr6.nnic@NA	transcript1791.chr6.nnic	NA	31835843	31836828	Gene ID= novel_gene_chr6_1792 TPM= 23.35 Transcript Type= NA
chr6	31859052	31862906	31859052	31862906	-	ENST00000375631.4@NEU1	ENST00000375631.4	protein_coding	31862618,31861999,31861188,31860439,31860042,31859052	31862906,31862191,31861450,31860621,31860264,31859945	Gene ID= ENSG00000204386.10 TPM= 5.84 Transcript Type= protein_coding
chr6	31863192	31879001	31863192	31879001	-	ENST00000229729.10@SLC44A4	ENST00000229729.10	protein_coding	31878941,31877034,31876056,31875852,31874929,31874721,31874460,31871474,31871314,31870812,31870603,31869545,31869155,31865873,31865690,31865498,31865315,31865010,31864816,31864652,31863192	31879001,31877082,31876129,31875930,31875028,31874846,31874520,31871561,31871397,31871047,31870702,31869637,31869257,31866126,31865784,31865601,31865388,31865080,31864910,31864736,31863748	Gene ID= ENSG00000204385.10 TPM= 21.02 Transcript Type= protein_coding
chr6	31879759	31897717	31879759	31897717	-	transcript1793.chr6.nic@EHMT2	transcript1793.chr6.nic	protein_coding	31897636,31896923,31896606,31896263,31892826,31892694,31892407,31889468,31889228,31888969,31888599,31888363,31888041,31887779,31887577,31886995,31886775,31886581,31884891,31884645,31884392,31883806,31883362,31882894,31882699,31881014,31880673,31879759	31897717,31896989,31896824,31896516,31892910,31892734,31892562,31889602,31889342,31889070,31888747,31888506,31888276,31887961,31887659,31887101,31886897,31886682,31885016,31884799,31884559,31883950,31883439,31883009,31882785,31881092,31880848,31880264	Gene ID= ENSG00000204371.11 TPM= 7.68 Transcript Type= NA
chr6	31879759	31897684	31879759	31897684	-	ENST00000375537.8@EHMT2	ENST00000375537.8	protein_coding	31897636,31896923,31896606,31896263,31892826,31892694,31892407,31889468,31889228,31888969,31888599,31888363,31888041,31887779,31887577,31886995,31886775,31886581,31884912,31884645,31884392,31883806,31883362,31882894,31882699,31881014,31880673,31879759	31897684,31896989,31896824,31896516,31892910,31892734,31892562,31889602,31889342,31889070,31888747,31888506,31888276,31887961,31887659,31887101,31886897,31886682,31885016,31884799,31884559,31883950,31883439,31883009,31882785,31881092,31880848,31880264	Gene ID= ENSG00000204371.11 TPM= 65.88 Transcript Type= protein_coding
chr6	31879759	31897677	31879759	31897677	-	ENST00000375530.8@EHMT2	ENST00000375530.8	protein_coding	31897636,31896923,31896606,31896263,31892826,31892694,31892407,31889468,31889228,31888599,31888363,31888041,31887779,31887577,31886995,31886775,31886581,31884912,31884645,31884392,31883806,31883362,31882894,31882699,31881014,31880673,31879759	31897677,31896989,31896824,31896516,31892910,31892734,31892562,31889602,31889342,31888747,31888506,31888276,31887961,31887659,31887101,31886897,31886682,31885016,31884799,31884559,31883950,31883439,31883009,31882785,31881092,31880848,31880264	Gene ID= ENSG00000204371.11 TPM= 27.53 Transcript Type= protein_coding
chr6	31879759	31897202	31879759	31897202	-	ENST00000395728.7@EHMT2	ENST00000395728.7	protein_coding	31896923,31896606,31896263,31892826,31892694,31892407,31889468,31889228,31888969,31888599,31888363,31888041,31887779,31887577,31886995,31886775,31886581,31884912,31884645,31884392,31883806,31883362,31882894,31882699,31881014,31880673,31879759	31897202,31896824,31896516,31892910,31892734,31892562,31889602,31889342,31889070,31888747,31888506,31888276,31887961,31887659,31887101,31886897,31886682,31885016,31884799,31884559,31883950,31883439,31883009,31882785,31881092,31880848,31880264	Gene ID= ENSG00000204371.11 TPM= 15.67 Transcript Type= protein_coding
chr6	31897782	31899146	31897782	31899146	+	transcript1800.chr6.nnic@NA	transcript1800.chr6.nnic	NA	31897782	31899146	Gene ID= novel_gene_chr6_1801 TPM= 2.34 Transcript Type= NA
chr6	31927426	31945672	31927426	31945672	+	transcript1835.chr6.nic@C2	transcript1835.chr6.nic	protein_coding	31927426,31927955,31928732,31933610,31933867,31934166,31935923,31937319,31939231,31942959,31943225,31943416,31943644,31943917,31944135,31944727,31944980,31945462	31927798,31928164,31928917,31933783,31933965,31934299,31936061,31937459,31939320,31943099,31943319,31943527,31943809,31943993,31944226,31944853,31945029,31945672	Gene ID= ENSG00000166278.14 TPM= 17.81 Transcript Type= NA
chr6	31927558	31945672	31927558	31945672	+	transcript1843.chr6.nic@C2	transcript1843.chr6.nic	protein_coding	31927558,31927955,31933610,31933867,31934166,31935923,31937319,31939231,31942959,31943225,31943416,31943644,31943917,31944135,31944727,31944980,31945178	31927798,31928164,31933783,31933965,31934299,31936061,31937459,31939320,31943099,31943319,31943527,31943809,31943993,31944226,31944853,31945029,31945672	Gene ID= ENSG00000166278.14 TPM= 34.89 Transcript Type= NA
chr6	31927496	31945671	31927496	31945671	+	ENST00000442278.6@C2	ENST00000442278.6	protein_coding	31927496,31933610,31933867,31934166,31935923,31937319,31939231,31942959,31943225,31943416,31943644,31943917,31944135,31944727,31944980,31945178	31927798,31933783,31933965,31934299,31936061,31937459,31939320,31943099,31943319,31943527,31943809,31943993,31944226,31944853,31945029,31945671	Gene ID= ENSG00000166278.14 TPM= 43.06 Transcript Type= protein_coding
chr6	31927477	31945672	31927477	31945672	+	ENST00000299367.9@C2	ENST00000299367.9	protein_coding	31927477,31927955,31928732,31933610,31933867,31934166,31935923,31937319,31939231,31942959,31943225,31943416,31943644,31943917,31944135,31944727,31944980,31945178	31927798,31928164,31928917,31933783,31933965,31934299,31936061,31937459,31939320,31943099,31943319,31943527,31943809,31943993,31944226,31944853,31945029,31945672	Gene ID= ENSG00000166278.14 TPM= 540.46 Transcript Type= protein_coding
chr6	31927703	31935058	31927703	31935058	+	ENST00000418949.6@C2	ENST00000418949.6	protein_coding	31927703,31927955,31928732,31933610,31933867,31934166	31927798,31928164,31928917,31933783,31933965,31935058	Gene ID= ENSG00000166278.14 TPM= 22.18 Transcript Type= protein_coding
chr6	31927739	31945391	31927739	31945391	+	ENST00000482060.5@C2	ENST00000482060.5	protein_coding	31927739,31927955,31928732,31933610,31933867,31934166,31935923,31937319,31939231,31942959,31943225,31943416,31943644,31943917,31944135,31944727,31944980,31945178	31927798,31928192,31928917,31933783,31933965,31934299,31936061,31937459,31939320,31943099,31943319,31943527,31943809,31943993,31944226,31944853,31945029,31945391	Gene ID= ENSG00000166278.14 TPM= 14.01 Transcript Type= nonsense_mediated_decay
chr6	31952087	31959110	31952087	31959110	-	ENST00000375429.7@NELFE	ENST00000375429.7	protein_coding	31958892,31958372,31956941,31956693,31955219,31955059,31954555,31954298,31954080,31953729,31952087	31959110,31958454,31957010,31956838,31955293,31955096,31954892,31954442,31954134,31953831,31952398	Gene ID= ENSG00000204356.13 TPM= 11.68 Transcript Type= protein_coding
chr6	31952228	31958962	31952228	31958962	-	ENST00000481121.5@NELFE	ENST00000481121.5	protein_coding	31958892,31958372,31956941,31956693,31955219,31955059,31954555,31954298,31953729,31952228	31958962,31958454,31957010,31956838,31955293,31955096,31954892,31954442,31954134,31952398	Gene ID= ENSG00000204356.13 TPM= 4.67 Transcript Type= retained_intron
chr6	31959080	31969755	31959080	31969755	+	ENST00000375394.6@SKIV2L	ENST00000375394.6	protein_coding	31959080,31959297,31960010,31960220,31960432,31960666,31961041,31961196,31961547,31961909,31962439,31962714,31962985,31963413,31963637,31963913,31964232,31965783,31966709,31967004,31967273,31967715,31967956,31968328,31968686,31968871,31969280,31969515	31959214,31959400,31960119,31960337,31960546,31960740,31961094,31961386,31961675,31962054,31962585,31962798,31963091,31963559,31963733,31964125,31964342,31966013,31966846,31967141,31967377,31967862,31968082,31968538,31968796,31969089,31969420,31969755	Gene ID= ENSG00000204351.11 TPM= 52.93 Transcript Type= protein_coding
chr6	31959139	31969751	31959139	31969751	+	transcript1821.chr6.nic@SKIV2L	transcript1821.chr6.nic	protein_coding	31959139,31959297,31960010,31960220,31960432,31960666,31961041,31961196,31961547,31961909,31962439,31962714,31962985,31963413,31963637,31963913,31964232,31965783,31966709,31967004,31967273,31967715,31967956,31968328,31968686,31968871,31969280	31959214,31959400,31960119,31960337,31960546,31960740,31961094,31961386,31961675,31962054,31962585,31962798,31963091,31963559,31963733,31964125,31964342,31966013,31966846,31967141,31967377,31967862,31968082,31968538,31968796,31969089,31969751	Gene ID= ENSG00000204351.11 TPM= 5.64 Transcript Type= NA
chr6	31959139	31969751	31959139	31969751	+	transcript1825.chr6.nic@SKIV2L	transcript1825.chr6.nic	protein_coding	31959139,31959297,31960010,31960220,31960432,31960666,31961041,31961196,31961547,31961909,31962439,31962714,31962985,31963413,31963637,31963913,31964232,31965783,31966709,31967004,31967273,31967715,31967956,31968686,31968871,31969280	31959214,31959400,31960119,31960337,31960546,31960740,31961094,31961386,31961675,31962054,31962585,31962798,31963091,31963559,31963733,31964125,31964342,31966013,31966846,31967141,31967377,31967862,31968538,31968796,31969089,31969751	Gene ID= ENSG00000204351.11 TPM= 5.64 Transcript Type= NA
chr6	31969810	31972292	31969810	31972292	-	ENST00000337523.9@DXO	ENST00000337523.9	protein_coding	31971929,31971320,31970912,31970606,31970343,31970109,31969810	31972292,31971681,31971147,31970825,31970478,31970203,31970024	Gene ID= ENSG00000204348.9 TPM= 10.51 Transcript Type= protein_coding
chr6	31969810	31972252	31969810	31972252	-	ENST00000477826.5@DXO	ENST00000477826.5	protein_coding	31970606,31970343,31970109,31969810	31972252,31970478,31970203,31970024	Gene ID= ENSG00000204348.9 TPM= 2.34 Transcript Type= retained_intron
chr6	31969815	31972095	31969815	31972095	-	ENST00000473976.1@DXO	ENST00000473976.1	protein_coding	31971320,31970109,31969815	31972095,31971147,31970024	Gene ID= ENSG00000204348.9 TPM= 3.5 Transcript Type= retained_intron
chr6	31969844	31971984	31969844	31971984	-	ENST00000375356.7@DXO	ENST00000375356.7	protein_coding	31971320,31970912,31970606,31970343,31970109,31969844	31971984,31971147,31970825,31970478,31970203,31970024	Gene ID= ENSG00000204348.9 TPM= 1.17 Transcript Type= protein_coding
chr6	31971091	31981446	31971091	31981446	+	ENST00000466132.5@STK19	ENST00000466132.5	protein_coding	31971091,31971869,31972621,31978903,31979414,31980451,31980654,31981004	31971274,31972511,31972757,31978998,31979553,31980548,31980801,31981446	Gene ID= ENSG00000204344.14 TPM= 4.67 Transcript Type= retained_intron
chr6	31972343	32014184	31972343	32014184	+	transcript1857.chr6.nnic@STK19	transcript1857.chr6.nnic	protein_coding	31972343,31972621,31978903,31979414,31980451,32013392,32013742	31972511,31972757,31978998,31979553,31980548,32013539,32014184	Gene ID= ENSG00000204344.14 TPM= 4.67 Transcript Type= NA
chr6	31972332	32014184	31972332	32014184	+	transcript1859.chr6.nnic@STK19	transcript1859.chr6.nnic	protein_coding	31972332,31972621,31978903,31979414,31980451,32013392,32013742	31972511,31974052,31978998,31979553,31980548,32013539,32014184	Gene ID= ENSG00000204344.14 TPM= 2.34 Transcript Type= NA
chr6	31972555	31981446	31972555	31981446	+	ENST00000491861.5@STK19	ENST00000491861.5	protein_coding	31972555,31978903,31979414,31980451,31980654,31981004	31972757,31978998,31979553,31980548,31980801,31981446	Gene ID= ENSG00000204344.14 TPM= 2.34 Transcript Type= retained_intron
chr6	31982024	32002681	31982024	32002681	+	ENST00000428956.6@C4A	ENST00000428956.6	protein_coding	31982024,31982305,31982718,31983129,31983278,31983585,31983838,31984073,31984276,31991192,31991407,31991732,31992047,31992386,31992796,31993090,31993425,31993714,31993916,31994245,31994498,31994952,31995105,31995330,31995719,31995955,31996207,31996429,31996829,31997144,31997705,31998814,31999005,31999306,31999487,32001053,32001321,32001496,32001777,32002123,32002399	31982172,31982503,31982919,31983199,31983366,31983667,31983934,31984178,31984408,31991307,31991586,31991914,31992232,31992544,31992922,31993164,31993622,31993825,31993986,31994384,31994707,31995003,31995194,31995539,31995794,31996111,31996323,31996600,31997061,31997311,31997764,31998907,31999191,31999396,31999561,32001155,32001410,32001594,32001860,32002255,32002681	Gene ID= ENSG00000244731.7 TPM= 216 Transcript Type= protein_coding
chr6	32014762	32035418	32014762	32035418	+	ENST00000435363.6@C4B	ENST00000435363.6	protein_coding	32014762,32015043,32015456,32015867,32016016,32016323,32016576,32016811,32017014,32023930,32024145,32024470,32024785,32025124,32025534,32025828,32026163,32026452,32026654,32026983,32027236,32027690,32027843,32028068,32028457,32028693,32028945,32029167,32029566,32029881,32030442,32031551,32031742,32032043,32032224,32033790,32034058,32034233,32034514,32034860,32035136	32014910,32015241,32015657,32015937,32016104,32016405,32016672,32016916,32017146,32024045,32024324,32024652,32024970,32025282,32025660,32025902,32026360,32026563,32026724,32027122,32027445,32027741,32027932,32028277,32028532,32028849,32029061,32029338,32029798,32030048,32030501,32031644,32031928,32032133,32032298,32033892,32034147,32034331,32034597,32034992,32035418	Gene ID= ENSG00000224389.8 TPM= 163.46 Transcript Type= protein_coding
chr6	32041154	32109374	32041154	32109374	-	ENST00000375244.7@TNXB	ENST00000375244.7	protein_coding	32109181,32097796,32095611,32095076,32089223,32088785,32085750,32084413,32082036,32081368,32079033,32073647,32071990,32070127,32069553,32068822,32068390,32067661,32064821,32062157,32061397,32058058,32056586,32055851,32053388,32052670,32049998,32049270,32048363,32047734,32046175,32045006,32044381,32044007,32043749,32043437,32043175,32042951,32042699,32042455,32042266,32042012,32041771,32041154	32109374,32098206,32097449,32095191,32089379,32089048,32086118,32084709,32082326,32081673,32079365,32073952,32072298,32070414,32069861,32069136,32068707,32067984,32065117,32062483,32061720,32058390,32056903,32056174,32053711,32052993,32050321,32049587,32048650,32048012,32046456,32045326,32044716,32044129,32043892,32043556,32043318,32043081,32042831,32042606,32042362,32042173,32041934,32041450	Gene ID= ENSG00000168477.17 TPM= 171.64 Transcript Type= protein_coding
chr6	32120442	32128222	32120442	32128222	-	ENST00000495579.5@ATF6B	ENST00000495579.5	protein_coding	32128117,32127671,32127442,32127103,32126117,32121263,32120989,32120442	32128222,32127750,32127520,32127194,32126252,32121348,32121124,32120902	Gene ID= ENSG00000213676.10 TPM= 8.17 Transcript Type= retained_intron
chr6	32128707	32130291	32128707	32130291	-	ENST00000375156.3@FKBPL	ENST00000375156.3	protein_coding	32130095,32128707	32130291,32129854	Gene ID= ENSG00000204315.3 TPM= 4.67 Transcript Type= protein_coding
chr6	32154095	32163678	32154095	32163678	+	ENST00000375137.6@PPT2	ENST00000375137.6	protein_coding	32154095,32154587,32155030,32155688,32155871,32157637,32157840,32162568,32162807	32154394,32154777,32155183,32155783,32155978,32157720,32157924,32162622,32163678	Gene ID= ENSG00000221988.12 TPM= 13.43 Transcript Type= protein_coding
chr6	32153845	32168281	32153845	32168281	+	ENST00000428388.6@PPT2-EGFL8	ENST00000428388.6	protein_coding	32153845,32154587,32155030,32155688,32155871,32157637,32157840,32162568,32164579,32166138,32166701,32166910,32167087,32167350,32167503,32167910	32154404,32154777,32155183,32155783,32155978,32157720,32157924,32162622,32164657,32166620,32166810,32167005,32167257,32167429,32167656,32168281	Gene ID= ENSG00000258388.7 TPM= 2.92 Transcript Type= nonsense_mediated_decay
chr6	32164583	32168281	32164583	32168281	+	ENST00000333845.10@EGFL8	ENST00000333845.10	protein_coding	32164583,32166138,32166498,32166701,32166910,32167087,32167350,32167503,32167910	32164657,32166266,32166620,32166810,32167005,32167257,32167429,32167656,32168281	Gene ID= ENSG00000241404.6 TPM= 4.67 Transcript Type= protein_coding
chr6	32168212	32176122	32168212	32176122	-	ENST00000375107.7@AGPAT1	ENST00000375107.7	protein_coding	32175814,32171297,32170937,32170425,32170165,32169966,32168212	32176122,32171505,32171070,32170600,32170260,32170038,32169448	Gene ID= ENSG00000204310.12 TPM= 96.33 Transcript Type= protein_coding
chr6	32168212	32177080	32168212	32177080	-	ENST00000395499.5@AGPAT1	ENST00000395499.5	protein_coding	32176510,32171297,32170937,32170425,32170165,32169966,32168212	32177080,32171505,32171070,32170600,32170260,32170038,32169448	Gene ID= ENSG00000204310.12 TPM= 14.59 Transcript Type= protein_coding
chr6	32178354	32180793	32178354	32180793	+	ENST00000375094.3@RNF5	ENST00000375094.3	protein_coding	32178354,32179541,32179651,32179877,32180009,32180229	32178651,32179559,32179763,32179931,32180126,32180793	Gene ID= ENSG00000204308.7 TPM= 86.4 Transcript Type= protein_coding
chr6	32178395	32184769	32178395	32184769	+	transcript1936.chr6.nnic@RNF5	transcript1936.chr6.nnic	protein_coding	32178395,32179541,32179651,32179877,32180009,32183289	32178651,32179559,32179763,32179931,32180126,32184769	Gene ID= ENSG00000204308.7 TPM= 3.5 Transcript Type= NA
chr6	32180968	32184324	32180968	32184324	-	ENST00000375076.8@AGER	ENST00000375076.8	protein_coding	32184171,32183881,32183555,32183324,32183114,32182841,32182568,32182247,32181606,32181351,32180968	32184324,32183987,32183750,32183388,32183201,32183023,32182698,32182388,32181632,32181477,32181239	Gene ID= ENSG00000204305.13 TPM= 2282.24 Transcript Type= protein_coding
chr6	32180968	32184246	32180968	32184246	-	ENST00000375055.6@AGER	ENST00000375055.6	protein_coding	32184171,32183881,32183555,32183324,32183114,32182841,32182568,32182247,32181524,32180968	32184246,32183987,32183750,32183388,32183201,32183023,32182698,32182388,32181632,32181239	Gene ID= ENSG00000204305.13 TPM= 242.84 Transcript Type= protein_coding
chr6	32180968	32184322	32180968	32184322	-	ENST00000375069.7@AGER	ENST00000375069.7	protein_coding	32184171,32183881,32183555,32183276,32183114,32182841,32182568,32182247,32181606,32181351,32180968	32184322,32183987,32183750,32183388,32183201,32183023,32182698,32182388,32181632,32181477,32181239	Gene ID= ENSG00000204305.13 TPM= 225.26 Transcript Type= protein_coding
chr6	32180968	32184322	32180968	32184322	-	ENST00000375070.7@AGER	ENST00000375070.7	protein_coding	32184171,32183881,32183555,32183324,32183114,32182841,32182568,32182247,32181351,32180968	32184322,32183987,32183750,32183388,32183201,32183023,32182698,32182388,32181477,32181239	Gene ID= ENSG00000204305.13 TPM= 58.55 Transcript Type= protein_coding
chr6	32180968	32184322	32180968	32184322	-	ENST00000438221.6@AGER	ENST00000438221.6	protein_coding	32184171,32183881,32183555,32183276,32183114,32182841,32182568,32182247,32181524,32180968	32184322,32183987,32183750,32183388,32183201,32183023,32182698,32182388,32181632,32181239	Gene ID= ENSG00000204305.13 TPM= 39.62 Transcript Type= protein_coding
chr6	32190766	32192906	32190766	32192906	-	ENST00000375040.7@GPSM3	ENST00000375040.7	protein_coding	32192472,32192148,32191709,32190766	32192906,32192250,32191908,32191503	Gene ID= ENSG00000213654.9 TPM= 42.03 Transcript Type= protein_coding
chr6	32194843	32224068	32194843	32224068	-	transcript1948.chr6.nnic@NOTCH4	transcript1948.chr6.nnic	protein_coding	32223856,32223005,32222511,32220978,32220756,32220405,32220129,32219592,32217995,32217153,32216945,32215226,32214110,32213688,32213135,32212824,32212474,32210752,32204137,32203770,32202076,32201117,32200831,32198926,32198658,32198421,32197299,32196925,32196324,32194843	32224068,32223086,32222806,32221325,32220878,32220641,32220284,32219786,32218108,32217266,32217067,32215385,32214255,32213840,32213218,32212911,32212627,32210936,32204389,32203882,32202599,32201500,32201006,32199145,32198730,32198559,32197594,32197072,32196421,32196150	Gene ID= ENSG00000204301.6 TPM= 74.92 Transcript Type= NA
chr6	32194843	32224067	32194843	32224067	-	ENST00000375023.3@NOTCH4	ENST00000375023.3	protein_coding	32223856,32223005,32222511,32220978,32220756,32220405,32220129,32219592,32217995,32217153,32216945,32215226,32214110,32213688,32213135,32212824,32212474,32210752,32204137,32203770,32202076,32201117,32200831,32198926,32198649,32198421,32197299,32196925,32196324,32194843	32224067,32223086,32222806,32221325,32220878,32220641,32220284,32219786,32218108,32217266,32217067,32215385,32214255,32213840,32213252,32212911,32212627,32210936,32204389,32203882,32202599,32201500,32201006,32199145,32198730,32198559,32197594,32197072,32196421,32196150	Gene ID= ENSG00000204301.6 TPM= 59.75 Transcript Type= protein_coding
chr6	32215860	32224057	32215860	32224057	-	ENST00000473562.1@NOTCH4	ENST00000473562.1	protein_coding	32223856,32223005,32222511,32220978,32220756,32220405,32220129,32219592,32217995,32217153,32215860	32224057,32223086,32222806,32221325,32220878,32220641,32220284,32219786,32218108,32217266,32217067	Gene ID= ENSG00000204301.6 TPM= 8.96 Transcript Type= retained_intron
chr6	32439842	32445046	32439842	32445046	+	ENST00000395388.6@HLA-DRA	ENST00000395388.6	protein_coding	32439842,32442448,32443185,32443756,32444652	32440032,32442693,32443466,32443921,32445046	Gene ID= ENSG00000204287.13 TPM= 1061.34 Transcript Type= protein_coding
chr6	32552722	32589849	32552722	32589849	-	transcript1968.chr6.nnic@HLA-DRB6	transcript1968.chr6.nnic	transcribed_unprocessed_pseudogene	32589643,32584109,32581594,32554690,32553856,32553376,32552722	32589849,32584378,32581838,32554726,32553966,32553399,32553059	Gene ID= ENSG00000229391.7 TPM= 131.16 Transcript Type= NA
chr6	32578769	32589848	32578769	32589848	-	ENST00000360004.5@HLA-DRB1	ENST00000360004.5	protein_coding	32589643,32584109,32581557,32580746,32580247,32578769	32589848,32584378,32581838,32580856,32580270,32579104	Gene ID= ENSG00000196126.11 TPM= 1447.84 Transcript Type= protein_coding
chr6	32637357	32643652	32637357	32643652	+	ENST00000343139.9@HLA-DQA1	ENST00000343139.9	protein_coding	32637357,32641310,32641972,32642610,32642952	32637540,32641558,32642253,32642784,32643652	Gene ID= ENSG00000196735.11 TPM= 7.01 Transcript Type= protein_coding
chr6	32637392	32645670	32637392	32645670	+	transcript2005.chr6.nnic@HLA-DQA1	transcript2005.chr6.nnic	protein_coding	32637392,32641310,32641972,32642610,32643158	32637540,32641558,32642253,32642784,32645670	Gene ID= ENSG00000196735.11 TPM= 12.84 Transcript Type= NA
chr6	32637392	32746887	32637392	32746887	+	transcript2007.chr6.nnic@HLA-DQA1	transcript2007.chr6.nnic	protein_coding	32637392,32641310,32641972,32642610,32746791	32637540,32641558,32642253,32642784,32746887	Gene ID= ENSG00000196735.11 TPM= 23.35 Transcript Type= NA
chr6	32637392	32746887	32637392	32746887	+	transcript2008.chr6.nnic@HLA-DQA1	transcript2008.chr6.nnic	protein_coding	32637392,32641310,32641972,32746240,32746791	32637540,32641558,32642253,32746414,32746887	Gene ID= ENSG00000196735.11 TPM= 6.42 Transcript Type= NA
chr6	32637392	32746887	32637392	32746887	+	transcript2009.chr6.nnic@HLA-DQA2	transcript2009.chr6.nnic	protein_coding	32637392,32641310,32745791,32746240,32746791	32637540,32641558,32746072,32746414,32746887	Gene ID= ENSG00000237541.3 TPM= 43.78 Transcript Type= NA
chr6	32659467	32666664	32659467	32666664	-	ENST00000399079.7@HLA-DQB1	ENST00000399079.7	protein_coding	32666499,32664798,32661967,32659467	32666664,32665067,32662248,32660249	Gene ID= ENSG00000179344.16 TPM= 2.34 Transcript Type= protein_coding
chr6	32659467	32666694	32659467	32666694	-	ENST00000434651.6@HLA-DQB1	ENST00000434651.6	protein_coding	32666499,32664798,32661967,32661347,32659467	32666694,32665067,32662248,32661457,32660249	Gene ID= ENSG00000179344.16 TPM= 23.35 Transcript Type= protein_coding
chr6	32756098	32763534	32756098	32763534	-	ENST00000437316.6@HLA-DQB2	ENST00000437316.6	protein_coding	32763374,32761660,32758850,32757773,32757281,32756098	32763534,32761926,32759131,32757883,32757304,32756466	Gene ID= ENSG00000232629.8 TPM= 3.5 Transcript Type= protein_coding
chr6	32756098	32763490	32756098	32763490	-	ENST00000411527.5@HLA-DQB2	ENST00000411527.5	protein_coding	32763374,32761660,32758850,32757281,32756098	32763490,32761926,32759131,32757304,32756466	Gene ID= ENSG00000232629.8 TPM= 1.17 Transcript Type= protein_coding
chr6	32812763	32817048	32812763	32817048	-	ENST00000438763.6@HLA-DOB	ENST00000438763.6	protein_coding	32816861,32815044,32814320,32813723,32813440,32812763	32817048,32815313,32814601,32813833,32813471,32813251	Gene ID= ENSG00000241106.6 TPM= 1.17 Transcript Type= protein_coding
chr6	32840717	32844703	32840717	32844703	-	ENST00000374881.2@PSMB8	ENST00000374881.2	protein_coding	32844279,32842942,32842672,32842134,32841531,32840717	32844703,32843089,32842783,32842263,32841735,32841047	Gene ID= ENSG00000204264.8 TPM= 47.09 Transcript Type= protein_coding
chr6	32840717	32844056	32840717	32844056	-	transcript2052.chr6.nic@PSMB8	transcript2052.chr6.nic	protein_coding	32843850,32842672,32842134,32841531,32840717	32844056,32843089,32842263,32841735,32841047	Gene ID= ENSG00000204264.8 TPM= 40.08 Transcript Type= NA
chr6	32840717	32844047	32840717	32844047	-	ENST00000374882.7@PSMB8	ENST00000374882.7	protein_coding	32843850,32842942,32842672,32842134,32841531,32840717	32844047,32843089,32842783,32842263,32841735,32841047	Gene ID= ENSG00000204264.8 TPM= 210.55 Transcript Type= protein_coding
chr6	32844086	32846495	32844086	32846495	+	ENST00000453426.1@PSMB8-AS1	ENST00000453426.1	lincRNA	32844086,32845418	32844274,32846495	Gene ID= ENSG00000204261.8 TPM= 7.01 Transcript Type= lincRNA
chr6	32845209	32853729	32845209	32853729	-	transcript2044.chr6.nnic@TAP1	transcript2044.chr6.nnic	protein_coding	32853039,32852388,32852109,32850944,32850320,32848652,32847919,32847513,32847068,32845209	32853729,32852502,32852239,32851149,32850517,32848840,32848092,32847675,32847204,32845785	Gene ID= ENSG00000168394.10 TPM= 8.17 Transcript Type= NA
chr6	32845209	32853978	32845209	32853978	-	ENST00000354258.4@TAP1	ENST00000354258.4	protein_coding	32853039,32852388,32852109,32850944,32850320,32848990,32848652,32847919,32847513,32847068,32845209	32853978,32852502,32852239,32851149,32850517,32849118,32848840,32848092,32847675,32847204,32845785	Gene ID= ENSG00000168394.10 TPM= 233.52 Transcript Type= protein_coding
chr6	32854161	32859585	32854161	32859585	+	ENST00000374859.2@PSMB9	ENST00000374859.2	protein_coding	32854161,32856138,32857263,32858005,32858364,32859405	32854289,32856205,32857394,32858134,32858505,32859585	Gene ID= ENSG00000240065.7 TPM= 64.22 Transcript Type= protein_coding
chr6	32934629	32941070	32934629	32941070	-	ENST00000418107.2@HLA-DMB	ENST00000418107.2	protein_coding	32940753,32938684,32937172,32935536,32935342,32934629	32941070,32938965,32937456,32935652,32935377,32934987	Gene ID= ENSG00000242574.8 TPM= 92.53 Transcript Type= protein_coding
chr6	32934629	32941060	32934629	32941060	-	transcript2076.chr6.nic@HLA-DMB	transcript2076.chr6.nic	protein_coding	32940753,32938684,32937172,32935342,32934629	32941060,32938965,32937456,32935377,32934987	Gene ID= ENSG00000242574.8 TPM= 3.79 Transcript Type= NA
chr6	32934629	32941060	32934629	32941060	-	transcript2077.chr6.nic@HLA-DMB	transcript2077.chr6.nic	protein_coding	32940753,32938684,32937172,32935536,32934629	32941060,32938965,32937456,32935652,32934987	Gene ID= ENSG00000242574.8 TPM= 17.81 Transcript Type= NA
chr6	32934629	32940984	32934629	32940984	-	ENST00000498020.1@HLA-DMB	ENST00000498020.1	protein_coding	32940753,32934629	32940984,32938965	Gene ID= ENSG00000242574.8 TPM= 2.34 Transcript Type= retained_intron
chr6	32948613	32953108	32948613	32953108	-	ENST00000477541.1@HLA-DMA	ENST00000477541.1	protein_coding	32952949,32949611,32949274,32948613	32953108,32950803,32949399,32948868	Gene ID= ENSG00000204257.14 TPM= 15.18 Transcript Type= retained_intron
chr6	32948613	32953122	32948613	32953122	-	ENST00000374843.8@HLA-DMA	ENST00000374843.8	protein_coding	32952949,32950519,32949611,32949271,32948613	32953122,32950803,32949889,32949399,32948868	Gene ID= ENSG00000204257.14 TPM= 347.24 Transcript Type= protein_coding
chr6	32948613	32953108	32948613	32953108	-	ENST00000395303.7@HLA-DMA	ENST00000395303.7	protein_coding	32952949,32950519,32949611,32949271,32948613	32953108,32950803,32949787,32949399,32948868	Gene ID= ENSG00000204257.14 TPM= 7.47 Transcript Type= protein_coding
chr6	32948613	32953061	32948613	32953061	-	ENST00000395305.7@HLA-DMA	ENST00000395305.7	protein_coding	32952949,32949611,32949271,32948613	32953061,32949889,32949399,32948868	Gene ID= ENSG00000204257.14 TPM= 5.14 Transcript Type= protein_coding
chr6	32948617	32953089	32948617	32953089	-	transcript2093.chr6.nnic@NA	transcript2093.chr6.nnic	NA	32948617	32953089	Gene ID= novel_gene_chr6_2094 TPM= 4.67 Transcript Type= NA
chr6	32970888	32981505	32970888	32981505	+	ENST00000374831.8@BRD2	ENST00000374831.8	protein_coding	32970888,32971595,32974462,32975384,32976031,32976250,32976562,32977442,32977757,32978126,32979828,32980342,32980582	32971197,32972927,32974765,32975521,32976169,32976464,32976936,32977570,32978005,32978388,32980132,32980464,32981505	Gene ID= ENSG00000204256.12 TPM= 11.29 Transcript Type= protein_coding
chr6	32968610	32978197	32968610	32978197	+	transcript2100.chr6.nic@BRD2	transcript2100.chr6.nic	protein_coding	32968610,32971595,32974462,32975384,32976031,32976250,32976562,32977442,32977757,32978126	32969056,32972927,32974765,32975521,32976169,32976464,32976936,32977570,32978005,32978197	Gene ID= ENSG00000204256.12 TPM= 10.12 Transcript Type= NA
chr6	32972217	32978203	32972217	32978203	+	ENST00000607833.5@BRD2	ENST00000607833.5	protein_coding	32972217,32974462,32975384,32976031,32976250,32976562,32977442,32977757,32978126	32972927,32974765,32975521,32976169,32976464,32976936,32977570,32978005,32978203	Gene ID= ENSG00000204256.12 TPM= 8.96 Transcript Type= protein_coding
chr6	33004182	33009596	33004182	33009596	-	transcript2105.chr6.nnic@HLA-DOA	transcript2105.chr6.nnic	protein_coding	33009455,33008013,33007311,33007080,33005709,33004182	33009596,33008261,33007592,33007215,33006841,33005390	Gene ID= ENSG00000204252.13 TPM= 9.34 Transcript Type= NA
chr6	33004178	33009612	33004178	33009612	-	ENST00000229829.6@HLA-DOA	ENST00000229829.6	protein_coding	33009455,33008013,33007311,33007080,33004178	33009612,33008261,33007592,33007215,33006841	Gene ID= ENSG00000204252.13 TPM= 10.51 Transcript Type= protein_coding
chr6	33065014	33080750	33065014	33080750	-	transcript2121.chr6.nic@HLA-DPA1	transcript2121.chr6.nic	protein_coding	33080680,33073471,33069641,33069019,33068638,33065014	33080750,33073710,33069886,33069300,33068804,33065347	Gene ID= ENSG00000231389.7 TPM= 699.39 Transcript Type= NA
chr6	33193588	33200688	33193588	33200688	-	ENST00000374680.3@RXRB	ENST00000374680.3	protein_coding	33200242,33199169,33198308,33197762,33196434,33195907,33195570,33195363,33194945,33193588	33200688,33199416,33198464,33197941,33196606,33196036,33195702,33195454,33195050,33194829	Gene ID= ENSG00000204231.10 TPM= 14.59 Transcript Type= protein_coding
chr6	33193588	33200662	33193588	33200662	-	transcript2135.chr6.nic@RXRB	transcript2135.chr6.nic	protein_coding	33200242,33198308,33197762,33196434,33195907,33195570,33195363,33194945,33193588	33200662,33198464,33197941,33196606,33196036,33195702,33195466,33195050,33194829	Gene ID= ENSG00000204231.10 TPM= 8.76 Transcript Type= NA
chr6	33193588	33200675	33193588	33200675	-	transcript2137.chr6.nic@RXRB	transcript2137.chr6.nic	protein_coding	33200242,33199169,33198308,33197762,33195570,33195363,33194945,33193588	33200675,33199416,33198464,33197941,33196606,33195454,33195050,33194829	Gene ID= ENSG00000204231.10 TPM= 9.92 Transcript Type= NA
chr6	33199486	33200661	33199486	33200661	-	transcript2145.chr6.nnic@NA	transcript2145.chr6.nnic	NA	33199486	33200661	Gene ID= novel_gene_chr6_2146 TPM= 2.34 Transcript Type= NA
chr6	33200826	33204439	33200826	33204439	+	ENST00000374675.7@SLC39A7	ENST00000374675.7	protein_coding	33200826,33201242,33201745,33202072,33202263,33202560,33202910,33203541	33200938,33201656,33201913,33202125,33202427,33202700,33203106,33204439	Gene ID= ENSG00000112473.17 TPM= 26.85 Transcript Type= protein_coding
chr6	33200873	33204439	33200873	33204439	+	ENST00000374677.7@SLC39A7	ENST00000374677.7	protein_coding	33200873,33201745,33202072,33202263,33202560,33202910,33203541	33201656,33201913,33202125,33202427,33202700,33203106,33204439	Gene ID= ENSG00000112473.17 TPM= 19.85 Transcript Type= protein_coding
chr6	33204642	33206831	33204642	33206831	+	ENST00000374662.3@HSD17B8	ENST00000374662.3	protein_coding	33204642,33204902,33205221,33205447,33205640,33205828,33206134,33206375,33206638	33204720,33205119,33205337,33205539,33205725,33205912,33206176,33206449,33206831	Gene ID= ENSG00000204228.3 TPM= 5.84 Transcript Type= protein_coding
chr6	33208495	33212722	33208495	33212722	+	ENST00000374656.4@RING1	ENST00000374656.4	protein_coding	33208495,33208765,33209626,33209915,33211158,33211729,33212298	33208644,33208900,33209786,33210130,33211547,33212002,33212722	Gene ID= ENSG00000204227.4 TPM= 11.68 Transcript Type= protein_coding
chr6	33250272	33271894	33250272	33271894	-	ENST00000445902.2@VPS52	ENST00000445902.2	protein_coding	33271586,33270199,33269999,33269744,33269490,33269014,33268499,33268108,33267865,33267682,33267188,33266557,33264782,33264374,33264008,33263772,33263484,33251860,33251518,33250272	33271894,33270283,33270051,33269819,33269557,33269189,33268649,33268208,33267997,33267739,33267321,33266712,33264900,33264497,33264103,33263879,33263549,33251971,33251636,33250987	Gene ID= ENSG00000223501.8 TPM= 40.08 Transcript Type= protein_coding
chr6	33250272	33271898	33250272	33271898	-	transcript2165.chr6.nic@VPS52	transcript2165.chr6.nic	protein_coding	33271586,33270199,33269999,33269744,33269490,33269014,33268499,33268108,33267865,33267682,33267188,33266557,33264374,33264008,33263772,33263484,33251860,33251518,33250272	33271898,33270283,33270051,33269819,33269557,33269189,33268649,33268208,33267997,33267739,33267321,33266712,33264900,33264103,33263879,33263549,33251971,33251636,33250987	Gene ID= ENSG00000223501.8 TPM= 5.06 Transcript Type= NA
chr6	33250272	33271898	33250272	33271898	-	transcript2170.chr6.nic@VPS52	transcript2170.chr6.nic	protein_coding	33271586,33270199,33269999,33269744,33269490,33269014,33268499,33268108,33267865,33267682,33267188,33266557,33264008,33263484,33251860,33251518,33250272	33271898,33270283,33270051,33269819,33269557,33269189,33268649,33268208,33267997,33267739,33267321,33266712,33264900,33263879,33251971,33251636,33250987	Gene ID= ENSG00000223501.8 TPM= 3.89 Transcript Type= NA
chr6	33272010	33276510	33272010	33276510	+	ENST00000439602.6@RPS18	ENST00000439602.6	protein_coding	33272010,33272628,33275797,33275965,33276176,33276391	33272122,33272726,33275883,33276066,33276267,33276510	Gene ID= ENSG00000231500.6 TPM= 650.35 Transcript Type= protein_coding
chr6	33275866	33276510	33275866	33276510	+	ENST00000479802.1@RPS18	ENST00000479802.1	protein_coding	33275866,33276176,33276391	33276066,33276267,33276510	Gene ID= ENSG00000231500.6 TPM= 2.34 Transcript Type= retained_intron
chr6	33272513	33276502	33272513	33276502	+	transcript2174.chr6.nnic@NA	transcript2174.chr6.nnic	NA	33272513	33276502	Gene ID= novel_gene_chr6_2175 TPM= 3.5 Transcript Type= NA
chr6	33277132	33278825	33277132	33278825	+	ENST00000451237.2@B3GALT4	ENST00000451237.2	protein_coding	33277132	33278825	Gene ID= ENSG00000235863.3 TPM= 42.03 Transcript Type= protein_coding
chr6	33277167	33284832	33277167	33284832	+	transcript2245.chr6.nnic@NA	transcript2245.chr6.nnic	NA	33277167	33284832	Gene ID= novel_gene_chr6_2246 TPM= 7.01 Transcript Type= NA
chr6	33279108	33289527	33279108	33289527	-	ENST00000374617.8@WDR46	ENST00000374617.8	protein_coding	33289102,33288804,33288614,33288358,33288148,33287965,33287614,33287355,33287091,33286795,33280674,33280428,33279764,33279497,33279108	33289527,33289013,33288694,33288470,33288235,33288026,33287718,33287505,33287226,33286894,33280987,33280522,33279859,33279610,33279374	Gene ID= ENSG00000227057.9 TPM= 56.04 Transcript Type= protein_coding
chr6	33279108	33289241	33279108	33289241	-	transcript2195.chr6.nnic@WDR46	transcript2195.chr6.nnic	protein_coding	33289102,33288804,33288614,33288358,33288148,33287965,33287614,33287355,33287091,33286795,33284285,33280428,33279764,33279497,33279108	33289241,33289013,33288694,33288470,33288235,33288026,33287718,33287505,33287226,33286894,33284390,33280987,33279859,33279610,33279374	Gene ID= ENSG00000227057.9 TPM= 2.34 Transcript Type= NA
chr6	33279108	33289238	33279108	33289238	-	transcript2202.chr6.nnic@WDR46	transcript2202.chr6.nnic	protein_coding	33289102,33288804,33288614,33288358,33288148,33287965,33287592,33287355,33287091,33286795,33280428,33279764,33279497,33279108	33289238,33289013,33288694,33288470,33288235,33288026,33287718,33287505,33287226,33286894,33280987,33279859,33279610,33279374	Gene ID= ENSG00000227057.9 TPM= 4.67 Transcript Type= NA
chr6	33279108	33289246	33279108	33289246	-	transcript2203.chr6.nic@WDR46	transcript2203.chr6.nic	protein_coding	33289102,33288804,33288614,33288358,33288148,33287965,33287614,33287355,33287091,33286795,33280428,33279764,33279497,33279108	33289246,33289013,33288694,33288470,33288235,33288026,33287718,33287505,33287226,33286894,33280987,33279859,33279610,33279374	Gene ID= ENSG00000227057.9 TPM= 11.68 Transcript Type= NA
chr6	33291654	33299419	33291654	33299419	-	transcript2178.chr6.nnic@RGL2	transcript2178.chr6.nnic	protein_coding	33299380,33298870,33298455,33297032,33296598,33296414,33296028,33295508,33295319,33295127,33294977,33294688,33294034,33293795,33293604,33293413,33293016,33292430,33291654	33299419,33299228,33298651,33297115,33296776,33296464,33296325,33295759,33295422,33295211,33295045,33294762,33294066,33293916,33293699,33293524,33293306,33292544,33292313	Gene ID= ENSG00000237441.9 TPM= 193.39 Transcript Type= NA
chr6	33291654	33297997	33291654	33297997	-	transcript2181.chr6.nic@RGL2	transcript2181.chr6.nic	protein_coding	33297931,33297032,33296598,33296414,33296028,33295508,33295319,33295127,33294977,33294688,33294034,33293795,33293604,33293413,33293016,33292430,33291654	33297997,33297115,33296776,33296464,33296325,33295759,33295422,33295211,33295045,33294762,33294066,33293916,33293699,33293524,33293306,33292544,33292313	Gene ID= ENSG00000237441.9 TPM= 31.09 Transcript Type= NA
chr6	33291654	33298974	33291654	33298974	-	transcript2190.chr6.nic@RGL2	transcript2190.chr6.nic	protein_coding	33298870,33297032,33296598,33296414,33295508,33295319,33295127,33294977,33294688,33294034,33293795,33293604,33293413,33293016,33292430,33291654	33298974,33297115,33296776,33296464,33296325,33295422,33295211,33295045,33294762,33294066,33293916,33293699,33293524,33293306,33292544,33292313	Gene ID= ENSG00000237441.9 TPM= 24.47 Transcript Type= NA
chr6	33291654	33298930	33291654	33298930	-	ENST00000437840.6@RGL2	ENST00000437840.6	protein_coding	33298870,33297032,33296598,33296414,33296028,33295508,33295319,33295127,33294977,33294688,33294034,33293795,33293604,33293413,33293016,33292430,33291654	33298930,33297115,33296776,33296464,33296325,33295759,33295422,33295211,33295045,33294762,33294066,33293916,33293699,33293524,33293306,33292544,33292313	Gene ID= ENSG00000237441.9 TPM= 40.43 Transcript Type= processed_transcript
chr6	33291654	33298521	33291654	33298521	-	ENST00000483151.5@RGL2	ENST00000483151.5	protein_coding	33298455,33297032,33296598,33296414,33296028,33295508,33295319,33295127,33294977,33294688,33294034,33293795,33293413,33293016,33292430,33291654	33298521,33297115,33296776,33296464,33296325,33295759,33295422,33295211,33295045,33294762,33294066,33293916,33293699,33293306,33292544,33292313	Gene ID= ENSG00000237441.9 TPM= 6.67 Transcript Type= retained_intron
chr6	33299694	33314298	33299694	33314298	-	transcript2222.chr6.nic@TAPBP	transcript2222.chr6.nic	protein_coding	33314005,33313694,33313217,33304297,33304128,33303955,33299694	33314298,33313864,33313477,33305387,33304217,33303989,33301771	Gene ID= ENSG00000231925.11 TPM= 397.57 Transcript Type= NA
chr6	33314418	33317735	33314418	33317735	-	ENST00000431845.2@ZBTB22	ENST00000431845.2	protein_coding	33317653,33314418	33317735,33316985	Gene ID= ENSG00000236104.2 TPM= 114.42 Transcript Type= protein_coding
chr6	33318558	33322958	33318558	33322958	-	transcript2218.chr6.nnic@DAXX	transcript2218.chr6.nnic	protein_coding	33322862,33321719,33320736,33320380,33320011,33319380,33318997,33318558	33322958,33321908,33321567,33320591,33320224,33319854,33319219,33318802	Gene ID= ENSG00000204209.11 TPM= 8.17 Transcript Type= NA
chr6	33318558	33323014	33318558	33323014	-	ENST00000374542.9@DAXX	ENST00000374542.9	protein_coding	33322862,33321719,33320736,33320380,33320011,33319380,33318997,33318558	33323014,33321977,33321567,33320591,33320224,33319854,33319219,33318802	Gene ID= ENSG00000204209.11 TPM= 109.75 Transcript Type= protein_coding
chr6	33318558	33322959	33318558	33322959	-	transcript2235.chr6.nic@DAXX	transcript2235.chr6.nic	protein_coding	33322862,33320380,33320011,33319380,33318997,33318558	33322959,33320591,33320224,33319854,33319219,33318802	Gene ID= ENSG00000204209.11 TPM= 5.84 Transcript Type= NA
chr6	33345529	33351765	33345529	33351765	+	transcript2279.chr6.nnic@NA	transcript2279.chr6.nnic	NA	33345529,33345776,33351468	33345661,33346376,33351765	Gene ID= novel_gene_chr6_2280 TPM= 2.34 Transcript Type= NA
chr6	33391536	33409924	33391536	33409924	+	ENST00000428849.6@KIFC1	ENST00000428849.6	protein_coding	33391536,33398029,33398288,33403314,33403485,33403729,33404852,33406196,33406592,33406800,33409646	33391997,33398166,33398387,33403367,33403535,33404129,33405631,33406486,33406665,33406875,33409924	Gene ID= ENSG00000237649.7 TPM= 2.34 Transcript Type= protein_coding
chr6	33410961	33416453	33410961	33416453	+	ENST00000374516.7@PHF1	ENST00000374516.7	protein_coding	33410961,33412248,33412508,33412698,33413196,33413409,33413736,33414041,33414243,33414477,33414725,33414955,33415235,33415590,33415810	33411215,33412422,33412589,33412793,33413296,33413557,33413831,33414109,33414366,33414544,33414829,33415144,33415329,33415670,33416453	Gene ID= ENSG00000112511.17 TPM= 50.21 Transcript Type= protein_coding
chr6	33410961	33416453	33410961	33416453	+	ENST00000374512.7@PHF1	ENST00000374512.7	protein_coding	33410961,33412248,33412508,33412698,33413196,33413409,33413736,33414041,33414243,33414477,33414725,33414966,33415590,33415810	33411215,33412422,33412589,33412793,33413296,33413557,33413831,33414109,33414366,33414544,33414829,33415144,33415670,33416453	Gene ID= ENSG00000112511.17 TPM= 5.84 Transcript Type= protein_coding
chr6	33411003	33416453	33411003	33416453	+	transcript2263.chr6.nic@PHF1	transcript2263.chr6.nic	protein_coding	33411003,33412248,33412508,33412698,33413196,33413409,33413736,33414041,33414243,33414477,33414725,33415235,33415590,33415810	33411215,33412422,33412589,33412793,33413296,33413557,33413831,33414109,33414366,33414544,33415144,33415329,33415670,33416453	Gene ID= ENSG00000112511.17 TPM= 23.94 Transcript Type= NA
chr6	33416550	33418107	33416550	33418107	-	ENST00000482684.5@CUTA	ENST00000482684.5	protein_coding	33417869,33417481,33417251,33417097,33416920,33416550	33418107,33417695,33417310,33417142,33416969,33416776	Gene ID= ENSG00000112514.15 TPM= 38.33 Transcript Type= nonsense_mediated_decay
chr6	33416543	33418122	33416543	33418122	-	ENST00000488034.5@CUTA	ENST00000488034.5	protein_coding	33417959,33417481,33417251,33417097,33416920,33416543	33418122,33417695,33417310,33417142,33416969,33416776	Gene ID= ENSG00000112514.15 TPM= 38.33 Transcript Type= protein_coding
chr6	33416442	33418317	33416442	33418317	-	ENST00000374500.9@CUTA	ENST00000374500.9	protein_coding	33418087,33417481,33417251,33417097,33416920,33416442	33418317,33417695,33417310,33417142,33416969,33416776	Gene ID= ENSG00000112514.15 TPM= 24.52 Transcript Type= protein_coding
chr6	33416542	33418288	33416542	33418288	-	ENST00000611509.4@CUTA	ENST00000611509.4	protein_coding	33417481,33417251,33417097,33416920,33416542	33418288,33417310,33417142,33416969,33416776	Gene ID= ENSG00000112514.15 TPM= 23.35 Transcript Type= protein_coding
chr6	33416550	33418142	33416550	33418142	-	ENST00000374484.8@CUTA	ENST00000374484.8	protein_coding	33418087,33417481,33417247,33417097,33416920,33416550	33418142,33417695,33417310,33417142,33416969,33416776	Gene ID= ENSG00000112514.15 TPM= 16.35 Transcript Type= nonsense_mediated_decay
chr6	33416552	33417921	33416552	33417921	-	ENST00000440279.7@CUTA	ENST00000440279.7	protein_coding	33417481,33417251,33417097,33416920,33416552	33417921,33417310,33417142,33416969,33416776	Gene ID= ENSG00000112514.15 TPM= 2.72 Transcript Type= protein_coding
chr6	33454579	33457548	33454579	33457548	+	ENST00000395064.2@ZBTB9	ENST00000395064.2	protein_coding	33454579,33455030	33454775,33457548	Gene ID= ENSG00000213588.5 TPM= 35.03 Transcript Type= protein_coding
chr6	33572552	33580248	33572552	33580248	-	transcript2288.chr6.nnic@BAK1	transcript2288.chr6.nnic	protein_coding	33580025,33577798,33577535,33575793,33575298,33574034,33572552	33580248,33577908,33577635,33575928,33575441,33574214,33573907	Gene ID= ENSG00000030110.12 TPM= 5.74 Transcript Type= NA
chr6	33572552	33580297	33572552	33580297	-	transcript2290.chr6.nnic@BAK1	transcript2290.chr6.nnic	protein_coding	33580025,33577535,33575793,33575298,33574034,33572552	33580297,33577635,33575866,33575441,33574214,33573907	Gene ID= ENSG00000030110.12 TPM= 5.74 Transcript Type= NA
chr6	33572547	33580293	33572547	33580293	-	ENST00000442998.6@BAK1	ENST00000442998.6	protein_coding	33580025,33577535,33575793,33575298,33574506,33574034,33572547	33580293,33577635,33575928,33575441,33574525,33574214,33573907	Gene ID= ENSG00000030110.12 TPM= 39.99 Transcript Type= protein_coding
chr6	33572552	33580297	33572552	33580297	-	transcript2292.chr6.nic@BAK1	transcript2292.chr6.nic	protein_coding	33580025,33577535,33575793,33575298,33572552	33580297,33577635,33575928,33575441,33574214	Gene ID= ENSG00000030110.12 TPM= 5.84 Transcript Type= NA
chr6	33572552	33580242	33572552	33580242	-	ENST00000374467.3@BAK1	ENST00000374467.3	protein_coding	33580025,33577535,33575793,33575298,33574034,33572552	33580242,33577635,33575928,33575441,33574214,33573907	Gene ID= ENSG00000030110.12 TPM= 41.94 Transcript Type= protein_coding
chr6	33623328	33624470	33623328	33624470	-	transcript2308.chr6.nnic@NA	transcript2308.chr6.nnic	NA	33623328	33624470	Gene ID= novel_gene_chr6_2309 TPM= 29.19 Transcript Type= NA
chr6	33696761	33711727	33696761	33711727	-	ENST00000607484.5@UQCC2	ENST00000607484.5	protein_coding	33711549,33701346,33700444,33696761	33711727,33701420,33700513,33697750	Gene ID= ENSG00000137288.9 TPM= 2.34 Transcript Type= protein_coding
chr6	33697571	33711705	33697571	33711705	-	transcript2304.chr6.nic@UQCC2	transcript2304.chr6.nic	protein_coding	33711549,33701346,33697571	33711705,33701420,33700513	Gene ID= ENSG00000137288.9 TPM= 3.5 Transcript Type= NA
chr6	33694293	33698657	33694293	33698657	-	ENST00000606961.1@UQCC2	ENST00000606961.1	protein_coding	33694293	33698657	Gene ID= ENSG00000137288.9 TPM= 3.5 Transcript Type= retained_intron
chr6	33721670	33746905	33721670	33746905	-	ENST00000293756.4@IP6K3	ENST00000293756.4	protein_coding	33746758,33735278,33728087,33726731,33725441,33721670	33746905,33735655,33728300,33726906,33725616,33723187	Gene ID= ENSG00000161896.11 TPM= 5.84 Transcript Type= protein_coding
chr6	33771202	33789136	33771202	33789136	-	ENST00000293760.9@LEMD2	ENST00000293760.9	protein_coding	33788381,33786734,33784352,33781077,33780100,33778242,33777138,33776954,33771202	33789136,33786774,33784427,33781153,33780179,33778387,33777239,33777056,33772778	Gene ID= ENSG00000161904.11 TPM= 229.25 Transcript Type= protein_coding
chr6	33771432	33789125	33771432	33789125	-	ENST00000421671.6@LEMD2	ENST00000421671.6	protein_coding	33788775,33786734,33784352,33781077,33780100,33778242,33777138,33776954,33771432	33789125,33786774,33784427,33781153,33780179,33778387,33777239,33777056,33772778	Gene ID= ENSG00000161904.11 TPM= 18.84 Transcript Type= nonsense_mediated_decay
chr6	34236873	34246231	34236873	34246231	+	ENST00000311487.9@HMGA1	ENST00000311487.9	protein_coding	34236873,34237204,34240737,34242712,34243468,34244831	34236963,34237317,34240915,34242795,34243518,34246231	Gene ID= ENSG00000137309.19 TPM= 38.33 Transcript Type= protein_coding
chr6	34236873	34246231	34236873	34246231	+	ENST00000401473.7@HMGA1	ENST00000401473.7	protein_coding	34236873,34237204,34240737,34242712,34243468,34244831	34236963,34237317,34240882,34242795,34243518,34246231	Gene ID= ENSG00000137309.19 TPM= 24.9 Transcript Type= protein_coding
chr6	34236873	34246230	34236873	34246230	+	ENST00000447654.5@HMGA1	ENST00000447654.5	protein_coding	34236873,34240737,34242712,34243468,34244831	34237317,34240915,34242795,34243518,34246230	Gene ID= ENSG00000137309.19 TPM= 17.32 Transcript Type= protein_coding
chr6	34246381	34249108	34246381	34249108	-	ENST00000636500.1@SMIM29	ENST00000636500.1	protein_coding	34248727,34247681,34247467,34247044,34246381	34249108,34247864,34247492,34247149,34246868	Gene ID= ENSG00000186577.12 TPM= 12.26 Transcript Type= protein_coding
chr6	34246380	34249470	34246380	34249470	-	ENST00000476320.5@SMIM29	ENST00000476320.5	protein_coding	34248979,34247681,34247467,34247044,34246380	34249470,34247864,34247492,34247149,34246868	Gene ID= ENSG00000186577.12 TPM= 44.37 Transcript Type= protein_coding
chr6	34246395	34249110	34246395	34249110	-	transcript2348.chr6.nic@SMIM29	transcript2348.chr6.nic	protein_coding	34247044,34246395	34249110,34246868	Gene ID= ENSG00000186577.12 TPM= 3.5 Transcript Type= NA
chr6	34246395	34249040	34246395	34249040	-	ENST00000394990.8@SMIM29	ENST00000394990.8	protein_coding	34248979,34247741,34247467,34247044,34246395	34249040,34247864,34247492,34247149,34246868	Gene ID= ENSG00000186577.12 TPM= 4.09 Transcript Type= protein_coding
chr6	34279679	34392674	34279679	34392674	-	ENST00000607016.1@NUDT3	ENST00000607016.1	protein_coding	34392264,34341862,34295641,34293451,34279679	34392674,34341972,34295685,34293535,34288931	Gene ID= ENSG00000272325.1 TPM= 29.19 Transcript Type= protein_coding
chr6	34417454	34426125	34417454	34426125	-	ENST00000326199.12@RPS10	ENST00000326199.12	protein_coding	34426032,34425072,34424669,34421730,34418369,34417454	34426125,34425221,34424840,34421807,34418424,34417547	Gene ID= ENSG00000124614.13 TPM= 159.96 Transcript Type= protein_coding
chr6	34417466	34426041	34417466	34426041	-	ENST00000621356.2@RPS10	ENST00000621356.2	protein_coding	34425796,34425072,34424669,34421730,34418369,34417466	34426041,34425221,34424840,34421807,34418424,34417547	Gene ID= ENSG00000124614.13 TPM= 4.67 Transcript Type= protein_coding
chr6	34537802	34556314	34537802	34556314	-	ENST00000374037.7@SPDEF	ENST00000374037.7	protein_coding	34555929,34544020,34540984,34539515,34539250,34537802	34556314,34544484,34541181,34539562,34539396,34538452	Gene ID= ENSG00000124664.10 TPM= 3.5 Transcript Type= protein_coding
chr6	34587288	34696859	34587288	34696859	-	ENST00000374026.7@C6orf106	ENST00000374026.7	protein_coding	34696446,34654625,34606555,34587288	34696859,34654779,34606904,34590600	Gene ID= ENSG00000196821.9 TPM= 28.02 Transcript Type= protein_coding
chr6	34587288	34696847	34587288	34696847	-	ENST00000374023.7@C6orf106	ENST00000374023.7	protein_coding	34696446,34654625,34646601,34606555,34587288	34696847,34654779,34646798,34606904,34590600	Gene ID= ENSG00000196821.9 TPM= 89.9 Transcript Type= protein_coding
chr6	34651985	34654177	34651985	34654177	+	transcript2383.chr6.nnic@NA	transcript2383.chr6.nnic	NA	34651985	34654177	Gene ID= novel_gene_chr6_2384 TPM= 3.5 Transcript Type= NA
chr6	34696317	34697470	34696317	34697470	+	ENST00000606971.5@AL451165.2	ENST00000606971.5	antisense_RNA	34696317,34697159	34696722,34697470	Gene ID= ENSG00000272288.5 TPM= 3.5 Transcript Type= antisense_RNA
chr6	34696945	34697470	34696945	34697470	+	ENST00000606496.1@AL451165.2	ENST00000606496.1	antisense_RNA	34696945,34697159	34696997,34697470	Gene ID= ENSG00000272288.5 TPM= 3.5 Transcript Type= antisense_RNA
chr6	34757406	34773794	34757406	34773794	+	ENST00000244520.9@SNRPC	ENST00000244520.9	protein_coding	34757406,34757912,34762595,34767908,34770291,34773446	34757551,34757954,34762703,34767997,34770395,34773794	Gene ID= ENSG00000124562.9 TPM= 51.37 Transcript Type= protein_coding
chr6	34792654	34793936	34792654	34793936	+	transcript2397.chr6.nnic@NA	transcript2397.chr6.nnic	NA	34792654	34793936	Gene ID= novel_gene_chr6_2398 TPM= 3.5 Transcript Type= NA
chr6	34877778	34888089	34877778	34888089	-	ENST00000361288.8@TAF11	ENST00000361288.8	protein_coding	34887787,34882932,34880289,34879967,34877778	34888089,34883080,34880376,34880063,34878720	Gene ID= ENSG00000064995.16 TPM= 19.85 Transcript Type= protein_coding
chr6	34877778	34888071	34877778	34888071	-	ENST00000420584.3@TAF11	ENST00000420584.3	protein_coding	34887787,34882932,34880289,34877778	34888071,34883080,34880376,34878720	Gene ID= ENSG00000064995.16 TPM= 3.5 Transcript Type= protein_coding
chr6	34889258	35091413	34889258	35091413	+	transcript2399.chr6.nnic@ANKS1A	transcript2399.chr6.nnic	protein_coding	34889258,34967239,34970010,34972581,34981690,34982752,34983113,34983324,34985082,34989224,34994302,35017473,35054099,35060147,35078558,35079516,35079821,35080994,35082691,35083155,35083417,35084121,35085766,35086952,35088606	34889599,34967319,34970166,34972643,34981986,34982827,34983214,34983425,34985278,34989316,34994422,35018059,35054165,35060253,35078656,35079668,35079928,35081158,35082816,35083226,35083503,35084258,35085936,35087049,35091413	Gene ID= ENSG00000064999.13 TPM= 2.34 Transcript Type= NA
chr6	35016807	35091413	35016807	35091413	+	transcript2402.chr6.nnic@ANKS1A	transcript2402.chr6.nnic	protein_coding	35016807,35017473,35054099,35060147,35078558,35079516,35079821,35080994,35082691,35083155,35083417,35084121,35085766,35086952,35088606	35016917,35018059,35054165,35060253,35078656,35079668,35079928,35081158,35082816,35083226,35083503,35084258,35085936,35087049,35091413	Gene ID= ENSG00000064999.13 TPM= 2.34 Transcript Type= NA
chr6	35017026	35091413	35017026	35091413	+	transcript2403.chr6.nnic@ANKS1A	transcript2403.chr6.nnic	protein_coding	35017026,35017473,35054099,35060147,35078558,35079516,35079821,35080994,35082691,35083155,35083417,35084121,35085766,35086952,35088606	35017073,35018059,35054165,35060253,35078656,35079668,35079928,35081158,35082816,35083226,35083503,35084258,35085936,35087049,35091413	Gene ID= ENSG00000064999.13 TPM= 2.34 Transcript Type= NA
chr6	35017026	35091413	35017026	35091413	+	transcript2406.chr6.nic@ANKS1A	transcript2406.chr6.nic	protein_coding	35017026,35054099,35060147,35078558,35079516,35079821,35080994,35082691,35083155,35083417,35084121,35085766,35086952,35088606	35018059,35054165,35060253,35078656,35079668,35079928,35081158,35082816,35083226,35083503,35084258,35085936,35087049,35091413	Gene ID= ENSG00000064999.13 TPM= 21.02 Transcript Type= NA
chr6	34889265	35091413	34889265	35091413	+	ENST00000360359.4@ANKS1A	ENST00000360359.4	protein_coding	34889265,34967239,34970010,34981690,34982752,34983113,34983324,34985082,34989224,34994302,35017473,35054099,35060147,35078558,35079516,35079821,35080994,35082691,35083155,35083417,35084121,35085766,35086952,35088606	34889599,34967319,34970166,34981986,34982827,34983214,34983425,34985278,34989316,34994422,35018059,35054165,35060253,35078656,35079668,35079928,35081158,35082816,35083226,35083503,35084258,35085936,35087049,35091413	Gene ID= ENSG00000064999.13 TPM= 87.57 Transcript Type= protein_coding
chr6	35214419	35253079	35214419	35253079	+	ENST00000274938.7@SCUBE3	ENST00000274938.7	protein_coding	35214419,35227580,35228614,35231725,35232850,35233185,35237902,35239752,35240374,35241141,35241543,35241806,35242204,35242622,35243021,35243594,35243963,35244650,35245228,35245944,35246206,35248556	35214503,35227702,35228739,35231859,35232975,35233301,35238018,35239874,35240490,35241266,35241659,35241910,35242320,35242780,35243236,35243755,35244130,35244811,35245425,35246096,35246285,35253079	Gene ID= ENSG00000146197.8 TPM= 1.17 Transcript Type= protein_coding
chr6	35259511	35295983	35259511	35295983	+	transcript2422.chr6.nic@ZNF76	transcript2422.chr6.nic	protein_coding	35259511,35281056,35286128,35286322,35287646,35290266,35290641,35291278,35291558,35292554,35292881,35294456,35295144	35259727,35281224,35286208,35286399,35287845,35290382,35290716,35291403,35291737,35292787,35293044,35294569,35295983	Gene ID= ENSG00000065029.14 TPM= 6.62 Transcript Type= NA
chr6	35259511	35288971	35259511	35288971	+	transcript2425.chr6.nic@ZNF76	transcript2425.chr6.nic	protein_coding	35259511,35281056,35286128,35286322,35287646	35259727,35281224,35286208,35286399,35288971	Gene ID= ENSG00000065029.14 TPM= 3.5 Transcript Type= NA
chr6	35259523	35288971	35259523	35288971	+	transcript2426.chr6.nic@ZNF76	transcript2426.chr6.nic	protein_coding	35259523,35281056,35286128,35286322,35287646	35259841,35281224,35286208,35286399,35288971	Gene ID= ENSG00000065029.14 TPM= 4.67 Transcript Type= NA
chr6	35259672	35295985	35259672	35295985	+	ENST00000373953.7@ZNF76	ENST00000373953.7	protein_coding	35259672,35281056,35286128,35286322,35287646,35290266,35290641,35291278,35291558,35292554,35292881,35293751,35294456,35295144	35259841,35281224,35286208,35286399,35287845,35290382,35290716,35291403,35291737,35292787,35293044,35293915,35294569,35295985	Gene ID= ENSG00000065029.14 TPM= 32.31 Transcript Type= protein_coding
chr6	35259774	35295983	35259774	35295983	+	ENST00000339411.5@ZNF76	ENST00000339411.5	protein_coding	35259774,35281056,35286128,35286322,35287646,35290266,35290641,35291278,35291558,35292554,35292881,35294456,35295144	35259841,35281224,35286208,35286399,35287845,35290382,35290716,35291403,35291737,35292787,35293044,35294569,35295983	Gene ID= ENSG00000065029.14 TPM= 8.96 Transcript Type= protein_coding
chr6	35297818	35321771	35297818	35321771	+	transcript2432.chr6.nnic@DEF6	transcript2432.chr6.nnic	protein_coding	35297818,35309670,35310459,35312214,35312626,35317891,35318173,35319524,35319819,35320884,35321187	35297952,35309810,35310644,35312538,35312772,35317999,35318471,35319690,35320017,35320974,35321771	Gene ID= ENSG00000023892.10 TPM= 2.34 Transcript Type= NA
chr6	35297852	35321771	35297852	35321771	+	ENST00000316637.6@DEF6	ENST00000316637.6	protein_coding	35297852,35309670,35310459,35312302,35312626,35317891,35318173,35319524,35319819,35320884,35321187	35297952,35309810,35310644,35312538,35312772,35317999,35318471,35319690,35320017,35320974,35321771	Gene ID= ENSG00000023892.10 TPM= 42.03 Transcript Type= protein_coding
chr6	35342535	35428174	35342535	35428174	+	transcript2444.chr6.nnic@PPARD	transcript2444.chr6.nnic	protein_coding	35342535,35347067,35410987,35420127,35421820,35423946,35424329,35425948	35342681,35347150,35411217,35420281,35421958,35424148,35424779,35428174	Gene ID= ENSG00000112033.13 TPM= 8.47 Transcript Type= NA
chr6	35342558	35428191	35342558	35428191	+	ENST00000360694.7@PPARD	ENST00000360694.7	protein_coding	35342558,35347067,35410987,35420127,35421820,35423946,35424329,35425832	35342681,35347150,35411217,35420281,35421958,35424148,35424779,35428191	Gene ID= ENSG00000112033.13 TPM= 20.53 Transcript Type= protein_coding
chr6	35347909	35428178	35347909	35428178	+	transcript2452.chr6.nnic@PPARD	transcript2452.chr6.nnic	protein_coding	35347909,35410987,35420127,35421820,35423946,35424329,35425832	35349003,35411217,35420281,35421958,35424148,35424779,35428178	Gene ID= ENSG00000112033.13 TPM= 12.35 Transcript Type= NA
chr6	35420820	35428178	35420820	35428178	+	transcript2456.chr6.nic@PPARD	transcript2456.chr6.nic	protein_coding	35420820,35423946,35424329,35425832	35421958,35424148,35424779,35428178	Gene ID= ENSG00000112033.13 TPM= 14.69 Transcript Type= NA
chr6	35347910	35352026	35347910	35352026	-	transcript2460.chr6.nnic@NA	transcript2460.chr6.nnic	NA	35347910	35352026	Gene ID= novel_gene_chr6_2461 TPM= 25.69 Transcript Type= NA
chr6	35452361	35467103	35452361	35467103	+	ENST00000229769.2@FANCE	ENST00000229769.2	protein_coding	35452361,35455747,35457556,35457916,35458297,35459331,35459682,35460552,35462789,35466244	35452793,35456353,35457600,35457984,35458440,35459454,35459760,35460618,35462914,35467103	Gene ID= ENSG00000112039.3 TPM= 17.9 Transcript Type= protein_coding
chr6	35452324	35467099	35452324	35467099	+	transcript2468.chr6.nnic@FANCE	transcript2468.chr6.nnic	protein_coding	35452324,35455747,35457556,35457916,35458297,35459331,35459682,35460552,35466244	35452793,35456353,35457600,35457984,35458440,35459454,35459760,35460618,35467099	Gene ID= ENSG00000112039.3 TPM= 4.67 Transcript Type= NA
chr6	35452324	35467103	35452324	35467103	+	transcript2469.chr6.nnic@FANCE	transcript2469.chr6.nnic	protein_coding	35452324,35455747,35457556,35458297,35459331,35459682,35460552,35462789,35466244	35452793,35456353,35457600,35458440,35459454,35459760,35460618,35462914,35467103	Gene ID= ENSG00000112039.3 TPM= 9.73 Transcript Type= NA
chr6	35468408	35470785	35468408	35470785	+	ENST00000322203.6@RPL10A	ENST00000322203.6	protein_coding	35468408,35468799,35468947,35469381,35470179,35470580	35468439,35468873,35469027,35469529,35470351,35470785	Gene ID= ENSG00000198755.10 TPM= 673.7 Transcript Type= protein_coding
chr6	35468408	35470785	35468408	35470785	+	ENST00000467020.5@RPL10A	ENST00000467020.5	protein_coding	35468408,35468799,35468947,35470179,35470580	35468439,35468873,35469529,35470351,35470785	Gene ID= ENSG00000198755.10 TPM= 29.19 Transcript Type= processed_transcript
chr6	35468420	35470785	35468420	35470785	+	ENST00000478340.2@RPL10A	ENST00000478340.2	protein_coding	35468420,35468799,35468947,35469381,35470179,35470580	35468439,35468873,35469285,35469529,35470351,35470785	Gene ID= ENSG00000198755.10 TPM= 8.17 Transcript Type= processed_transcript
chr6	35468420	35470785	35468420	35470785	+	ENST00000464112.5@RPL10A	ENST00000464112.5	protein_coding	35468420,35468947,35469381,35470179,35470580	35468873,35469027,35469529,35470351,35470785	Gene ID= ENSG00000198755.10 TPM= 21.02 Transcript Type= processed_transcript
chr6	35473597	35481617	35473597	35481617	-	transcript2495.chr6.nic@TEAD3	transcript2495.chr6.nic	protein_coding	35479305,35478434,35478275,35477311,35476302,35475919,35475566,35475336,35473597	35481617,35478571,35478324,35477372,35476435,35476092,35475706,35475488,35475157	Gene ID= ENSG00000007866.19 TPM= 16.35 Transcript Type= NA
chr6	35473597	35497076	35473597	35497076	-	ENST00000338863.11@TEAD3	ENST00000338863.11	protein_coding	35496898,35486461,35484560,35480312,35479305,35478434,35478275,35477311,35476302,35475919,35475566,35475336,35473597	35497076,35486711,35484624,35480374,35479316,35478571,35478324,35477372,35476435,35476092,35475706,35475488,35475157	Gene ID= ENSG00000007866.19 TPM= 38.53 Transcript Type= protein_coding
chr6	35543647	35546640	35543647	35546640	+	transcript2500.chr6.nnic@AL033519.3	transcript2500.chr6.nnic	lincRNA	35543647,35544868,35545215	35543758,35544933,35546640	Gene ID= ENSG00000228559.1 TPM= 3.5 Transcript Type= NA
chr6	35573590	35688998	35573590	35688998	-	transcript2523.chr6.nnic@FKBP5	transcript2523.chr6.nnic	protein_coding	35688804,35672592,35642720,35637014,35620132,35619096,35597248,35591130,35587034,35580036,35576994,35573590	35688998,35672759,35642843,35637158,35620274,35619210,35597404,35591220,35587117,35580221,35577233,35575942	Gene ID= ENSG00000096060.14 TPM= 13.86 Transcript Type= NA
chr6	35573585	35688915	35573585	35688915	-	ENST00000539068.5@FKBP5	ENST00000539068.5	protein_coding	35688732,35642720,35637014,35620132,35619096,35597248,35591130,35587034,35580036,35576994,35573585	35688915,35642843,35637158,35620274,35619210,35597404,35591220,35587117,35580221,35577233,35575942	Gene ID= ENSG00000096060.14 TPM= 5.69 Transcript Type= protein_coding
chr6	35573590	35688937	35573590	35688937	-	ENST00000357266.8@FKBP5	ENST00000357266.8	protein_coding	35688804,35642720,35637014,35620132,35619096,35597248,35591130,35587034,35580036,35576994,35573590	35688937,35642843,35637158,35620274,35619210,35597404,35591220,35587117,35580221,35577233,35575942	Gene ID= ENSG00000096060.14 TPM= 234.83 Transcript Type= protein_coding
chr6	35672990	35683898	35672990	35683898	+	transcript2567.chr6.nnic@NA	transcript2567.chr6.nnic	NA	35672990	35683898	Gene ID= novel_gene_chr6_2568 TPM= 9.34 Transcript Type= NA
chr6	35833034	35921098	35833034	35921098	-	transcript2579.chr6.nic@SRPK1	transcript2579.chr6.nic	protein_coding	35921044,35920468,35904879,35890895,35888815,35888024,35886724,35874233,35872563,35870934,35870281,35869482,35869010,35857261,35842535,35838337,35833034	35921098,35920528,35904974,35891013,35888923,35888111,35886811,35874339,35872728,35870959,35870494,35869901,35869110,35857368,35842604,35838429,35835488	Gene ID= ENSG00000096063.15 TPM= 2.63 Transcript Type= NA
chr6	35832966	35921342	35832966	35921342	-	ENST00000373825.6@SRPK1	ENST00000373825.6	protein_coding	35921044,35920468,35890895,35888815,35888024,35886724,35874233,35872563,35870934,35870281,35869482,35869010,35857261,35842535,35838337,35832966	35921342,35920528,35891013,35888923,35888111,35886811,35874339,35872728,35870959,35870494,35869901,35869110,35857368,35842604,35838429,35835488	Gene ID= ENSG00000096063.15 TPM= 52.83 Transcript Type= protein_coding
chr6	35886586	35921168	35886586	35921168	-	transcript2592.chr6.nic@SRPK1	transcript2592.chr6.nic	protein_coding	35921044,35920468,35890895,35888815,35888024,35886586	35921168,35920528,35891013,35888923,35888111,35886811	Gene ID= ENSG00000096063.15 TPM= 2.34 Transcript Type= NA
chr6	35833034	35921147	35833034	35921147	-	ENST00000423325.6@SRPK1	ENST00000423325.6	protein_coding	35921044,35920468,35890895,35888815,35888024,35886724,35874233,35872563,35870934,35870281,35869482,35869010,35857261,35842535,35838337,35833034	35921147,35920528,35891041,35888923,35888111,35886811,35874339,35872728,35870959,35870494,35869901,35869110,35857368,35842604,35838429,35835488	Gene ID= ENSG00000096063.15 TPM= 54 Transcript Type= protein_coding
chr6	36027770	36110755	36027770	36110755	+	ENST00000229794.8@MAPK14	ENST00000229794.8	protein_coding	36027770,36052699,36059289,36072873,36073691,36074049,36075848,36076537,36095987,36102571,36107455,36108380	36028273,36052828,36059347,36072984,36073720,36074096,36075962,36076608,36096066,36102649,36107628,36110755	Gene ID= ENSG00000112062.10 TPM= 74.73 Transcript Type= protein_coding
chr6	36116341	36120599	36116341	36120599	-	transcript2608.chr6.nnic@NA	transcript2608.chr6.nnic	NA	36116341	36120599	Gene ID= novel_gene_chr6_2609 TPM= 4.67 Transcript Type= NA
chr6	36130321	36140065	36130321	36140065	+	ENST00000211287.8@MAPK13	ENST00000211287.8	protein_coding	36130321,36131271,36132621,36135753,36136019,36136484,36136656,36136879,36138365,36138702,36138879,36139294	36130701,36131400,36132679,36135861,36136048,36136531,36136770,36136950,36138444,36138780,36139055,36140065	Gene ID= ENSG00000156711.16 TPM= 130.77 Transcript Type= protein_coding
chr6	36196744	36232790	36196744	36232790	+	ENST00000357641.10@BRPF3	ENST00000357641.10	protein_coding	36196744,36200297,36204658,36207313,36209787,36210216,36211258,36213880,36217917,36222168,36225267,36228902,36230426	36196970,36201770,36204814,36207444,36209915,36210528,36211560,36214386,36218010,36222265,36225364,36229056,36232790	Gene ID= ENSG00000096070.19 TPM= 37.36 Transcript Type= protein_coding
chr6	36366195	36387800	36366195	36387800	-	ENST00000620358.4@ETV7	ENST00000620358.4	protein_coding	36387536,36375871,36373453,36371330,36368929,36366875,36366195	36387800,36376035,36373578,36371560,36369071,36366975,36366762	Gene ID= ENSG00000010030.13 TPM= 1.17 Transcript Type= protein_coding
chr6	36366195	36387800	36366195	36387800	-	ENST00000373738.4@ETV7	ENST00000373738.4	protein_coding	36387536,36385534,36373453,36371330,36368929,36366875,36366195	36387800,36385669,36373578,36371560,36369071,36366975,36366762	Gene ID= ENSG00000010030.13 TPM= 1.17 Transcript Type= protein_coding
chr6	36366195	36387800	36366195	36387800	-	ENST00000538992.3@ETV7	ENST00000538992.3	protein_coding	36387536,36373453,36371330,36368929,36366875,36366195	36387800,36373578,36371560,36369071,36366975,36366762	Gene ID= ENSG00000010030.13 TPM= 1.17 Transcript Type= protein_coding
chr6	36366194	36387783	36366194	36387783	-	ENST00000340181.8@ETV7	ENST00000340181.8	protein_coding	36387536,36385534,36375871,36373453,36371330,36368929,36366875,36366194	36387783,36385669,36376035,36373578,36371560,36369071,36366975,36366762	Gene ID= ENSG00000010030.13 TPM= 7.01 Transcript Type= protein_coding
chr6	36442967	36491143	36442967	36491143	+	transcript2633.chr6.nic@KCTD20	transcript2633.chr6.nic	protein_coding	36442967,36465601,36470052,36474789,36479121,36479591,36481562,36484714,36486883	36443111,36465698,36470257,36475062,36479223,36479711,36481759,36484824,36491143	Gene ID= ENSG00000112078.13 TPM= 5.25 Transcript Type= NA
chr6	36442767	36491143	36442767	36491143	+	ENST00000373731.6@KCTD20	ENST00000373731.6	protein_coding	36442767,36470052,36474789,36479121,36479591,36481562,36484714,36486883	36443111,36470257,36475062,36479223,36479711,36481759,36484824,36491143	Gene ID= ENSG00000112078.13 TPM= 17.51 Transcript Type= protein_coding
chr6	36442767	36491143	36442767	36491143	+	ENST00000536244.5@KCTD20	ENST00000536244.5	protein_coding	36442767,36470052,36479121,36479591,36481562,36484714,36486883	36443111,36470257,36479223,36479711,36481759,36484824,36491143	Gene ID= ENSG00000112078.13 TPM= 8.17 Transcript Type= protein_coding
chr6	36442994	36490554	36442994	36490554	+	transcript2644.chr6.nnic@KCTD20	transcript2644.chr6.nnic	protein_coding	36442994,36479121,36479591,36481562,36484714,36486883	36443111,36479223,36479711,36481759,36484824,36490554	Gene ID= ENSG00000112078.13 TPM= 4.67 Transcript Type= NA
chr6	36493889	36547481	36493889	36547481	-	transcript2649.chr6.nnic@STK38	transcript2649.chr6.nnic	protein_coding	36547190,36540072,36525591,36524341,36521734,36517717,36515338,36507500,36506583,36499873,36498363,36497780,36496711,36493889	36547481,36540207,36525642,36524463,36521817,36517840,36515492,36507602,36506644,36499990,36498486,36497875,36496805,36494637	Gene ID= ENSG00000112079.8 TPM= 3.5 Transcript Type= NA
chr6	36493892	36547470	36493892	36547470	-	ENST00000229812.7@STK38	ENST00000229812.7	protein_coding	36547190,36540072,36525591,36524341,36521734,36517717,36515338,36507500,36506583,36499873,36498363,36497780,36496711,36493892	36547470,36540207,36525642,36524463,36521817,36517840,36515492,36507602,36506644,36499990,36498486,36497875,36496805,36495914	Gene ID= ENSG00000112079.8 TPM= 73.17 Transcript Type= protein_coding
chr6	36493892	36541356	36493892	36541356	-	transcript2651.chr6.nnic@STK38	transcript2651.chr6.nnic	protein_coding	36540601,36540072,36525591,36524341,36521734,36517717,36515338,36507500,36506583,36499873,36498363,36497780,36496711,36493892	36541356,36540207,36525642,36524463,36521817,36517840,36515492,36507602,36506644,36499990,36498486,36497875,36496805,36495914	Gene ID= ENSG00000112079.8 TPM= 3.12 Transcript Type= NA
chr6	36493892	36547481	36493892	36547481	-	transcript2654.chr6.nnic@STK38	transcript2654.chr6.nnic	protein_coding	36547190,36540072,36525591,36524341,36521734,36517717,36515338,36507500,36506583,36498363,36497780,36496711,36493892	36547481,36540207,36525642,36524463,36521817,36517840,36515492,36507602,36506644,36498486,36497875,36496805,36495914	Gene ID= ENSG00000112079.8 TPM= 3.12 Transcript Type= NA
chr6	36594785	36595505	36594785	36595505	-	transcript2673.chr6.nnic@NA	transcript2673.chr6.nnic	NA	36594785	36595505	Gene ID= novel_gene_chr6_2674 TPM= 2.34 Transcript Type= NA
chr6	36597099	36600045	36597099	36600045	-	transcript2675.chr6.nnic@NA	transcript2675.chr6.nnic	NA	36597099	36600045	Gene ID= novel_gene_chr6_2676 TPM= 29.19 Transcript Type= NA
chr6	36676490	36687337	36676490	36687337	+	ENST00000448526.6@CDKN1A	ENST00000448526.6	protein_coding	36676490,36677902,36684097,36685751	36676524,36677933,36684546,36687337	Gene ID= ENSG00000124762.13 TPM= 39.11 Transcript Type= protein_coding
chr6	36678710	36687337	36678710	36687337	+	ENST00000405375.5@CDKN1A	ENST00000405375.5	protein_coding	36678710,36684097,36685751	36678939,36684546,36687337	Gene ID= ENSG00000124762.13 TPM= 65.97 Transcript Type= protein_coding
chr6	36678658	36687339	36678658	36687339	+	ENST00000244741.9@CDKN1A	ENST00000244741.9	protein_coding	36678658,36684097,36685751	36678798,36684546,36687339	Gene ID= ENSG00000124762.13 TPM= 435.51 Transcript Type= protein_coding
chr6	36678710	36680854	36678710	36680854	+	transcript2691.chr6.nnic@NA	transcript2691.chr6.nnic	NA	36678710	36680854	Gene ID= novel_gene_chr6_2692 TPM= 19.85 Transcript Type= NA
chr6	36681587	36684030	36681587	36684030	-	transcript2693.chr6.nnic@NA	transcript2693.chr6.nnic	NA	36681587	36684030	Gene ID= novel_gene_chr6_2694 TPM= 19.85 Transcript Type= NA
chr6	36854827	36875024	36854827	36875024	-	ENST00000373699.5@PPIL1	ENST00000373699.5	protein_coding	36874717,36871718,36856586,36854827	36875024,36871872,36856654,36856033	Gene ID= ENSG00000137168.7 TPM= 14.01 Transcript Type= protein_coding
chr6	36854827	36858635	36854827	36858635	-	ENST00000483552.1@PPIL1	ENST00000483552.1	protein_coding	36858565,36856586,36854827	36858635,36856654,36856033	Gene ID= ENSG00000137168.7 TPM= 2.34 Transcript Type= processed_transcript
chr6	36968141	36986298	36968141	36986298	-	ENST00000373627.9@MTCH1	ENST00000373627.9	protein_coding	36985853,36981588,36978505,36978078,36977634,36977199,36975658,36972652,36970647,36970406,36970039,36968141	36986298,36981672,36978611,36978155,36977691,36977250,36975717,36972796,36970694,36970473,36970114,36968974	Gene ID= ENSG00000137409.19 TPM= 359.76 Transcript Type= protein_coding
chr6	36968141	36986298	36968141	36986298	-	ENST00000373616.9@MTCH1	ENST00000373616.9	protein_coding	36985853,36981588,36978505,36978078,36977634,36977199,36975658,36972703,36970647,36970406,36970039,36968141	36986298,36981672,36978611,36978155,36977691,36977250,36975717,36972796,36970694,36970473,36970114,36968974	Gene ID= ENSG00000137409.19 TPM= 529.26 Transcript Type= protein_coding
chr6	36968141	36986161	36968141	36986161	-	transcript2743.chr6.nic@MTCH1	transcript2743.chr6.nic	protein_coding	36985853,36981588,36978505,36978078,36977634,36977199,36975658,36972652,36970647,36970406,36968141	36986161,36981672,36978611,36978155,36977691,36977250,36975717,36972796,36970694,36970473,36970114	Gene ID= ENSG00000137409.19 TPM= 30.94 Transcript Type= NA
chr6	37012440	37029069	37012440	37029069	+	transcript2769.chr6.nic@FGD2	transcript2769.chr6.nic	protein_coding	37012440,37014646,37014892,37015768,37020541,37020709,37021512,37022239,37025792,37027429,37027948	37014100,37014704,37015038,37015860,37020620,37020739,37021604,37022370,37025938,37027575,37029069	Gene ID= ENSG00000146192.14 TPM= 13.43 Transcript Type= NA
chr6	37005647	37029070	37005647	37029070	+	ENST00000274963.12@FGD2	ENST00000274963.12	protein_coding	37005647,37008834,37010973,37011706,37013609,37013962,37014646,37014892,37015768,37020541,37020709,37021512,37022239,37025792,37027429,37027948	37005885,37009065,37011050,37011854,37013765,37014100,37014704,37015038,37015860,37020620,37020739,37021604,37022370,37025938,37027575,37029070	Gene ID= ENSG00000146192.14 TPM= 18.1 Transcript Type= protein_coding
chr6	37016536	37019715	37016536	37019715	-	transcript2776.chr6.nnic@NA	transcript2776.chr6.nnic	NA	37016536	37019715	Gene ID= novel_gene_chr6_2777 TPM= 3.5 Transcript Type= NA
chr6	37028617	37032090	37028617	37032090	-	transcript2774.chr6.nnic@NA	transcript2774.chr6.nnic	NA	37028617	37032090	Gene ID= novel_gene_chr6_2775 TPM= 14.01 Transcript Type= NA
chr6	37170139	37175426	37170139	37175426	+	transcript2787.chr6.nic@PIM1	transcript2787.chr6.nic	protein_coding	37170139,37170773,37171125,37172996,37173934	37170657,37171031,37171491,37173172,37175426	Gene ID= ENSG00000137193.13 TPM= 3.5 Transcript Type= NA
chr6	37170203	37175426	37170203	37175426	+	ENST00000373509.5@PIM1	ENST00000373509.5	protein_coding	37170203,37170773,37170981,37171125,37172996,37173934	37170657,37170879,37171031,37171491,37173172,37175426	Gene ID= ENSG00000137193.13 TPM= 135.44 Transcript Type= protein_coding
chr6	37218170	37258155	37218170	37258155	-	ENST00000357219.3@TMEM217	ENST00000357219.3	protein_coding	37257563,37218170	37258155,37219041	Gene ID= ENSG00000172738.11 TPM= 1.17 Transcript Type= retained_intron
chr6	37257772	37332970	37257772	37332970	+	ENST00000373491.3@TBC1D22B	ENST00000373491.3	protein_coding	37257772,37269594,37279304,37282185,37282882,37284336,37287007,37291243,37312918,37313816,37316703,37317111,37331044	37257973,37269650,37279611,37282364,37282952,37284464,37287072,37291357,37313024,37313891,37316830,37317206,37332970	Gene ID= ENSG00000065491.8 TPM= 19.85 Transcript Type= protein_coding
chr6	37353972	37394738	37353972	37394738	+	ENST00000373479.8@RNF8	ENST00000373479.8	protein_coding	37353972,37360446,37368484,37371512,37374620,37376926,37381150,37390742	37354275,37360574,37369218,37371574,37374709,37377033,37381354,37394738	Gene ID= ENSG00000112130.16 TPM= 24.52 Transcript Type= protein_coding
chr6	37353983	37391231	37353983	37391231	+	transcript2803.chr6.nic@RNF8	transcript2803.chr6.nic	protein_coding	37353983,37360446,37368484,37371512,37376926,37381150,37390742	37354275,37360574,37369218,37371574,37377033,37381354,37391231	Gene ID= ENSG00000112130.16 TPM= 2.34 Transcript Type= NA
chr6	37354091	37391231	37354091	37391231	+	ENST00000469731.5@RNF8	ENST00000469731.5	protein_coding	37354091,37360446,37368484,37371512,37374620,37376926,37390742	37354275,37360574,37369218,37371574,37374709,37377033,37391231	Gene ID= ENSG00000112130.16 TPM= 1.17 Transcript Type= protein_coding
chr6	37433202	37481506	37433202	37481506	+	transcript2808.chr6.nnic@CMTR1	transcript2808.chr6.nnic	protein_coding	37433202,37435624,37443999,37446291,37450251,37451806,37453047,37453240,37458612,37459566,37461549,37462829,37471021,37471847,37472419,37473470,37474524,37475321,37477592,37478409,37479147,37480013	37433377,37435762,37444150,37446449,37450343,37451877,37453141,37453312,37458810,37459684,37461645,37463008,37471077,37471904,37472487,37473601,37474646,37476194,37477639,37478521,37479255,37481506	Gene ID= ENSG00000137200.12 TPM= 4.67 Transcript Type= NA
chr6	37433220	37481506	37433220	37481506	+	ENST00000373451.8@CMTR1	ENST00000373451.8	protein_coding	37433220,37435624,37443999,37446291,37450251,37451806,37453047,37453240,37458612,37459566,37461549,37461970,37462829,37471021,37471847,37472419,37473470,37474524,37475321,37476126,37477592,37478409,37479147,37480013	37433377,37435762,37444150,37446449,37450343,37451877,37453141,37453312,37458810,37459684,37461645,37462102,37463008,37471077,37471904,37472487,37473601,37474646,37475412,37476194,37477639,37478521,37479255,37481506	Gene ID= ENSG00000137200.12 TPM= 52.54 Transcript Type= protein_coding
chr6	37482920	37499922	37482920	37499922	-	ENST00000373408.3@CCDC167	ENST00000373408.3	protein_coding	37499822,37485100,37484810,37482920	37499922,37485194,37484862,37483289	Gene ID= ENSG00000198937.8 TPM= 15.18 Transcript Type= protein_coding
chr6	37632515	37635239	37632515	37635239	-	transcript2814.chr6.nnic@NA	transcript2814.chr6.nnic	NA	37632515	37635239	Gene ID= novel_gene_chr6_2815 TPM= 4.67 Transcript Type= NA
chr6	37649871	37698096	37649871	37698096	-	transcript2821.chr6.nic@MDGA1	transcript2821.chr6.nic	protein_coding	37696745,37663967,37658245,37655700,37654800,37654274,37652011,37649871	37698096,37664106,37658419,37655896,37654932,37654543,37652340,37650405	Gene ID= ENSG00000112139.14 TPM= 7.01 Transcript Type= NA
chr6	37819774	38154624	37819774	38154624	+	transcript2826.chr6.nic@ZFAND3	transcript2826.chr6.nic	protein_coding	37819774,37929959,38003691,38061593,38082392,38116572,38152235	37820016,37929999,38003783,38061775,38082457,38116739,38154624	Gene ID= ENSG00000156639.11 TPM= 8.17 Transcript Type= NA
chr6	37819499	38154624	37819499	38154624	+	ENST00000287218.8@ZFAND3	ENST00000287218.8	protein_coding	37819499,37929959,38061593,38082392,38116572,38152235	37820016,37929999,38061775,38082457,38116739,38154624	Gene ID= ENSG00000156639.11 TPM= 43.2 Transcript Type= protein_coding
chr6	37819798	38154624	37819798	38154624	+	ENST00000373391.6@ZFAND3	ENST00000373391.6	protein_coding	37819798,37929959,38061593,38116572,38152235	37820016,37929999,38061775,38116739,38154624	Gene ID= ENSG00000156639.11 TPM= 7.01 Transcript Type= protein_coding
chr6	37835466	37837077	37835466	37837077	-	transcript2836.chr6.nnic@NA	transcript2836.chr6.nnic	NA	37835466	37837077	Gene ID= novel_gene_chr6_2837 TPM= 8.17 Transcript Type= NA
chr6	38042315	38043446	38042315	38043446	-	transcript2838.chr6.nnic@NA	transcript2838.chr6.nnic	NA	38042315	38043446	Gene ID= novel_gene_chr6_2839 TPM= 3.5 Transcript Type= NA
chr6	38120322	38127903	38120322	38127903	-	transcript2834.chr6.nnic@NA	transcript2834.chr6.nnic	NA	38120322	38127903	Gene ID= novel_gene_chr6_2835 TPM= 19.85 Transcript Type= NA
chr6	38495781	38498473	38495781	38498473	+	transcript2842.chr6.nnic@NA	transcript2842.chr6.nnic	NA	38495781	38498473	Gene ID= novel_gene_chr6_2843 TPM= 5.84 Transcript Type= NA
chr6	38635136	38639917	38635136	38639917	-	transcript2845.chr6.nnic@BTBD9	transcript2845.chr6.nnic	protein_coding	38639888,38635956,38635136	38639917,38639711,38635819	Gene ID= ENSG00000183826.16 TPM= 2.34 Transcript Type= NA
chr6	38675925	38703141	38675925	38703141	-	ENST00000373365.4@GLO1	ENST00000373365.4	protein_coding	38702971,38686892,38684374,38682808,38682012,38675925	38703141,38686974,38684514,38682875,38682101,38677383	Gene ID= ENSG00000124767.6 TPM= 150.62 Transcript Type= protein_coding
chr6	39104883	39115100	39104883	39115100	-	transcript2850.chr6.nic@SAYSD1	transcript2850.chr6.nic	protein_coding	39114883,39109314,39104883	39115100,39113720,39105776	Gene ID= ENSG00000112167.9 TPM= 3.5 Transcript Type= NA
chr6	39104064	39115189	39104064	39115189	-	ENST00000229903.4@SAYSD1	ENST00000229903.4	protein_coding	39114883,39104064	39115189,39105776	Gene ID= ENSG00000112167.9 TPM= 8.17 Transcript Type= protein_coding
chr6	39188973	39229450	39188973	39229450	-	ENST00000359534.3@KCNK5	ENST00000359534.3	protein_coding	39228926,39195876,39194594,39194169,39188973	39229450,39195987,39194760,39194337,39191755	Gene ID= ENSG00000164626.8 TPM= 23.35 Transcript Type= protein_coding
chr6	39299001	39314553	39299001	39314553	-	ENST00000373231.8@KCNK17	ENST00000373231.8	protein_coding	39314084,39310893,39304495,39303957,39299001	39314553,39311007,39304655,39304131,39299737	Gene ID= ENSG00000124780.13 TPM= 9.34 Transcript Type= protein_coding
chr6	39299001	39314435	39299001	39314435	-	transcript2865.chr6.nic@KCNK17	transcript2865.chr6.nic	protein_coding	39310893,39303957,39299001	39314435,39304655,39299737	Gene ID= ENSG00000124780.13 TPM= 3.5 Transcript Type= NA
chr6	39792366	39904868	39792366	39904868	+	ENST00000274867.8@DAAM2	ENST00000274867.8	protein_coding	39792366,39856247,39860928,39864433,39864980,39867510,39868823,39870340,39871506,39873238,39875330,39878203,39878404,39879178,39883962,39887486,39888679,39891341,39891634,39896812,39897175,39898877,39900077,39901302,39901813	39792465,39856470,39861017,39864507,39865074,39867843,39868933,39870443,39871572,39873355,39875468,39878261,39878588,39879477,39884069,39887592,39888763,39891447,39891722,39896980,39897282,39898937,39900208,39901472,39904868	Gene ID= ENSG00000146122.16 TPM= 19.85 Transcript Type= protein_coding
chr6	39905059	39934551	39905059	39934551	-	ENST00000373188.6@MOCS1	ENST00000373188.6	protein_coding	39934295,39927329,39925678,39916068,39913774,39913317,39912892,39912264,39909835,39909040,39905059	39934551,39927455,39925845,39916232,39913835,39913428,39913004,39912374,39909955,39909102,39907117	Gene ID= ENSG00000124615.17 TPM= 12.84 Transcript Type= protein_coding
chr6	39905523	39934510	39905523	39934510	-	transcript2877.chr6.nic@MOCS1	transcript2877.chr6.nic	protein_coding	39934295,39925678,39916068,39913774,39913317,39912892,39912264,39909835,39909040,39905523	39934510,39925845,39916232,39913835,39913428,39913004,39912374,39909955,39909102,39907117	Gene ID= ENSG00000124615.17 TPM= 8.17 Transcript Type= NA
chr6	39905523	39934510	39905523	39934510	-	transcript2878.chr6.nic@MOCS1	transcript2878.chr6.nic	protein_coding	39934295,39927329,39925678,39916068,39913774,39913317,39912892,39912264,39909835,39905523	39934510,39927455,39925845,39916232,39913835,39913428,39913004,39912374,39909955,39907117	Gene ID= ENSG00000124615.17 TPM= 8.17 Transcript Type= NA
chr6	39905321	39934497	39905321	39934497	-	ENST00000373195.7@MOCS1	ENST00000373195.7	protein_coding	39934295,39925678,39916068,39913774,39913317,39912892,39912264,39909835,39905321	39934497,39925845,39916232,39913835,39913428,39913004,39912374,39909955,39907117	Gene ID= ENSG00000124615.17 TPM= 5.84 Transcript Type= protein_coding
chr6	39905525	39934421	39905525	39934421	-	ENST00000340692.9@MOCS1	ENST00000340692.9	protein_coding	39934295,39927329,39925678,39916068,39913774,39913317,39912892,39912264,39909835,39909055,39905525	39934421,39927455,39925845,39916232,39913835,39913428,39913004,39912374,39909955,39909102,39907117	Gene ID= ENSG00000124615.17 TPM= 56.04 Transcript Type= protein_coding
chr6	41026911	41039217	41026911	41039217	-	ENST00000244565.7@UNC5CL	ENST00000244565.7	protein_coding	41039162,41034690,41033881,41032884,41032036,41031681,41030655,41030388,41026911	41039217,41035135,41034181,41033146,41032137,41031748,41030755,41030501,41028595	Gene ID= ENSG00000124602.9 TPM= 1.17 Transcript Type= protein_coding
chr6	41064778	41072591	41064778	41072591	-	ENST00000479950.5@OARD1	ENST00000479950.5	protein_coding	41072319,41071596,41071132,41070076,41068841,41064778	41072591,41071675,41071276,41070134,41068953,41067437	Gene ID= ENSG00000124596.16 TPM= 3.5 Transcript Type= protein_coding
chr6	41066801	41072538	41066801	41072538	-	ENST00000424266.6@OARD1	ENST00000424266.6	protein_coding	41072236,41071596,41071132,41070076,41068841,41066801	41072538,41071675,41071276,41070134,41068953,41067437	Gene ID= ENSG00000124596.16 TPM= 1.17 Transcript Type= protein_coding
chr6	41063801	41071352	41063801	41071352	-	transcript2904.chr6.nnic@NA	transcript2904.chr6.nnic	NA	41063801	41071352	Gene ID= novel_gene_chr6_2905 TPM= 2.34 Transcript Type= NA
chr6	41072935	41099976	41072935	41099976	+	transcript2911.chr6.nnic@NFYA	transcript2911.chr6.nnic	protein_coding	41072935,41079029,41080811,41084046,41089579,41090204,41091546,41092912,41094396,41097357	41073084,41079164,41080897,41084192,41089710,41090309,41091694,41093085,41094497,41099976	Gene ID= ENSG00000001167.14 TPM= 2.34 Transcript Type= NA
chr6	41072945	41099976	41072945	41099976	+	ENST00000341376.10@NFYA	ENST00000341376.10	protein_coding	41072945,41079029,41080811,41084046,41089579,41090204,41091528,41092912,41094396,41097357	41073084,41079164,41080897,41084192,41089710,41090309,41091694,41093085,41094497,41099976	Gene ID= ENSG00000001167.14 TPM= 23.35 Transcript Type= protein_coding
chr6	41158507	41163176	41158507	41163176	-	ENST00000373113.7@TREM2	ENST00000373113.7	protein_coding	41163043,41161263,41159792,41158873,41158507	41163176,41161613,41159882,41159066,41158780	Gene ID= ENSG00000095970.16 TPM= 32.69 Transcript Type= protein_coding
chr6	41190277	41201194	41190277	41201194	-	ENST00000483722.1@TREML2	ENST00000483722.1	protein_coding	41200954,41198109,41194425,41192801,41190277	41201194,41198429,41194833,41192901,41192506	Gene ID= ENSG00000112195.8 TPM= 3.5 Transcript Type= protein_coding
chr6	41275204	41286719	41275204	41286719	-	ENST00000244709.8@TREM1	ENST00000244709.8	protein_coding	41286607,41282395,41280961,41275204	41286719,41282751,41281153,41276230	Gene ID= ENSG00000124731.12 TPM= 7.01 Transcript Type= protein_coding
chr6	41638447	41654246	41638447	41654246	+	ENST00000230321.10@MDFI	ENST00000230321.10	protein_coding	41638447,41638739,41646126,41649619,41653319	41638652,41638825,41646308,41649843,41654246	Gene ID= ENSG00000112559.13 TPM= 1.17 Transcript Type= protein_coding
chr6	41683978	41735051	41683978	41735051	-	transcript2939.chr6.nic@TFEB	transcript2939.chr6.nic	protein_coding	41734900,41691001,41690663,41689731,41687908,41687753,41687094,41686090,41683978	41735051,41691235,41690917,41689811,41688028,41687809,41687169,41686237,41685078	Gene ID= ENSG00000112561.17 TPM= 9.73 Transcript Type= NA
chr6	41683980	41735608	41683980	41735608	-	ENST00000373033.5@TFEB	ENST00000373033.5	protein_coding	41735350,41691001,41690663,41689731,41687908,41687753,41687094,41686090,41683980	41735608,41691235,41690917,41689811,41688028,41687809,41687169,41686237,41685078	Gene ID= ENSG00000112561.17 TPM= 57.6 Transcript Type= protein_coding
chr6	41683979	41735527	41683979	41735527	-	ENST00000420312.5@TFEB	ENST00000420312.5	protein_coding	41735350,41691001,41689731,41687908,41687753,41687094,41686090,41683979	41735527,41691235,41689811,41688028,41687809,41687169,41686237,41685078	Gene ID= ENSG00000112561.17 TPM= 6.22 Transcript Type= protein_coding
chr6	41736711	41747397	41736711	41747397	-	ENST00000373025.7@PGC	ENST00000373025.7	protein_coding	41747276,41744658,41744397,41743271,41742290,41740491,41739799,41737730,41736711	41747397,41744808,41744514,41743389,41742489,41740610,41739946,41737828,41737004	Gene ID= ENSG00000096088.16 TPM= 1566.11 Transcript Type= protein_coding
chr6	41770176	41779900	41770176	41779900	-	ENST00000373018.7@FRS3	ENST00000373018.7	protein_coding	41779816,41778033,41776922,41775419,41772798,41771816,41770176	41779900,41778176,41777010,41775605,41772959,41771964,41771533	Gene ID= ENSG00000137218.10 TPM= 7.01 Transcript Type= protein_coding
chr6	41780721	41789898	41780721	41789898	+	transcript2974.chr6.nnic@AL365205.1	transcript2974.chr6.nnic	protein_coding	41780721,41781484,41783462,41784131,41784935,41785337,41786128,41786762,41789232,41789531	41780826,41781520,41783605,41784238,41785072,41785540,41786332,41787825,41789336,41789898	Gene ID= ENSG00000124593.15 TPM= 4.67 Transcript Type= NA
chr6	41780721	41789895	41780721	41789895	+	transcript2975.chr6.nnic@AL365205.1	transcript2975.chr6.nnic	protein_coding	41780721,41781484,41783462,41784131,41784935,41785337,41786128,41786762,41789232,41789568	41780826,41781520,41783605,41784238,41785072,41785540,41786332,41787825,41789336,41789895	Gene ID= ENSG00000124593.15 TPM= 9.88 Transcript Type= NA
chr6	41780721	41789898	41780721	41789898	+	transcript2978.chr6.nnic@AL365205.1	transcript2978.chr6.nnic	protein_coding	41780721,41781484,41783462,41784131,41784935,41785337,41786128,41786762,41789232,41789531	41780826,41781520,41783685,41784238,41785072,41785540,41786332,41787825,41789336,41789898	Gene ID= ENSG00000124593.15 TPM= 8.17 Transcript Type= NA
chr6	41780721	41789895	41780721	41789895	+	transcript2979.chr6.nnic@AL365205.1	transcript2979.chr6.nnic	protein_coding	41780721,41781484,41783462,41784131,41784935,41785337,41786128,41786762,41789232,41789568	41780826,41781520,41783685,41784238,41785072,41785540,41786332,41787825,41789336,41789895	Gene ID= ENSG00000124593.15 TPM= 4.04 Transcript Type= NA
chr6	41780740	41789895	41780740	41789895	+	transcript2982.chr6.nic@AL365205.1	transcript2982.chr6.nic	protein_coding	41780740,41781350,41783462,41783734,41784935,41785337,41786128,41786762,41789232,41789568	41780826,41781520,41783605,41784238,41785072,41785540,41786332,41787825,41789336,41789895	Gene ID= ENSG00000124593.15 TPM= 5.21 Transcript Type= NA
chr6	41780740	41789895	41780740	41789895	+	transcript2983.chr6.nic@AL365205.1	transcript2983.chr6.nic	protein_coding	41780740,41781350,41783462,41784131,41784935,41785337,41786128,41786762,41789232,41789568	41780826,41781520,41783605,41784238,41785072,41785540,41786332,41787825,41789336,41789895	Gene ID= ENSG00000124593.15 TPM= 6.38 Transcript Type= NA
chr6	41780740	41789895	41780740	41789895	+	transcript2994.chr6.nic@AL365205.1	transcript2994.chr6.nic	protein_coding	41780740,41783462,41783734,41784935,41785337,41786128,41786762,41789232,41789568	41781520,41783605,41784238,41785072,41785540,41786332,41787825,41789336,41789895	Gene ID= ENSG00000124593.15 TPM= 6.38 Transcript Type= NA
chr6	41780721	41789895	41780721	41789895	+	transcript2996.chr6.nnic@AL365205.1	transcript2996.chr6.nnic	protein_coding	41780721,41781484,41783462,41784131,41784935,41785337,41786128,41789232,41789568	41780826,41781520,41783605,41784238,41785072,41785540,41787825,41789336,41789895	Gene ID= ENSG00000124593.15 TPM= 8.36 Transcript Type= NA
chr6	41780740	41789895	41780740	41789895	+	transcript2999.chr6.nic@AL365205.1	transcript2999.chr6.nic	protein_coding	41780740,41781350,41783462,41784131,41784935,41785337,41786128,41789232,41789568	41780826,41781520,41783605,41784238,41785072,41785540,41787825,41789336,41789895	Gene ID= ENSG00000124593.15 TPM= 7.19 Transcript Type= NA
chr6	41780783	41789895	41780783	41789895	+	transcript3005.chr6.nic@AL365205.1	transcript3005.chr6.nic	protein_coding	41780783,41783462,41784935,41785337,41786128,41786762,41789232,41789568	41781520,41784238,41785072,41785540,41786332,41787825,41789336,41789895	Gene ID= ENSG00000124593.15 TPM= 4.04 Transcript Type= NA
chr6	41780740	41789895	41780740	41789895	+	transcript3008.chr6.nic@AL365205.1	transcript3008.chr6.nic	protein_coding	41780740,41781350,41783462,41784935,41785337,41786128,41789232,41789568	41780826,41781520,41784238,41785072,41785540,41787825,41789336,41789895	Gene ID= ENSG00000124593.15 TPM= 9.53 Transcript Type= NA
chr6	41780730	41789895	41780730	41789895	+	transcript3015.chr6.nic@AL365205.1	transcript3015.chr6.nic	protein_coding	41780730,41783462,41785337,41786128,41789232,41789568	41781520,41785072,41785540,41787825,41789336,41789895	Gene ID= ENSG00000124593.15 TPM= 6.5 Transcript Type= NA
chr6	41780772	41789891	41780772	41789891	+	ENST00000487182.5@AL365205.1	ENST00000487182.5	protein_coding	41780772,41781350,41783462,41784935,41785337,41786128,41786762,41789232,41789568	41780826,41781520,41784238,41785072,41785540,41786332,41787825,41789336,41789891	Gene ID= ENSG00000124593.15 TPM= 22.62 Transcript Type= retained_intron
chr6	41784524	41786648	41784524	41786648	-	transcript3023.chr6.nnic@NA	transcript3023.chr6.nnic	NA	41784524	41786648	Gene ID= novel_gene_chr6_3024 TPM= 2.34 Transcript Type= NA
chr6	41787662	41789898	41787662	41789898	+	ENST00000398884.7@TOMM6	ENST00000398884.7	protein_coding	41787662,41789232,41789531	41787825,41789336,41789898	Gene ID= ENSG00000214736.7 TPM= 15.18 Transcript Type= protein_coding
chr6	41787665	41789896	41787665	41789896	+	ENST00000398881.3@TOMM6	ENST00000398881.3	protein_coding	41787665,41789232,41789568	41787825,41789336,41789896	Gene ID= ENSG00000214736.7 TPM= 10.51 Transcript Type= protein_coding
chr6	41905354	41921099	41905354	41921099	-	ENST00000265350.8@MED20	ENST00000265350.8	protein_coding	41921005,41916785,41909269,41905354	41921099,41916939,41909522,41907287	Gene ID= ENSG00000124641.15 TPM= 15.18 Transcript Type= protein_coding
chr6	41921188	41933046	41921188	41933046	+	ENST00000230340.8@BYSL	ENST00000230340.8	protein_coding	41921188,41927374,41930132,41930635,41931396,41931728,41932361	41921830,41927536,41930270,41930768,41931556,41931830,41933046	Gene ID= ENSG00000112578.9 TPM= 10.51 Transcript Type= protein_coding
chr6	41934956	42048894	41934956	42048894	-	ENST00000415497.6@CCND3	ENST00000415497.6	protein_coding	42048501,41937235,41936559,41934956	42048894,41937394,41936695,41936107	Gene ID= ENSG00000112576.12 TPM= 45.34 Transcript Type= protein_coding
chr6	41934952	41941805	41934952	41941805	-	transcript3051.chr6.nic@CCND3	transcript3051.chr6.nic	protein_coding	41941452,41940370,41934952	41941805,41940585,41937394	Gene ID= ENSG00000112576.12 TPM= 10.12 Transcript Type= NA
chr6	41934933	41941848	41934933	41941848	-	ENST00000372991.8@CCND3	ENST00000372991.8	protein_coding	41941452,41940370,41937235,41936559,41934933	41941848,41940585,41937394,41936695,41936107	Gene ID= ENSG00000112576.12 TPM= 318.95 Transcript Type= protein_coding
chr6	41934956	42048968	41934956	42048968	-	ENST00000372988.8@CCND3	ENST00000372988.8	protein_coding	42048501,41940370,41937235,41936559,41934956	42048968,41940585,41937394,41936695,41936107	Gene ID= ENSG00000112576.12 TPM= 69.86 Transcript Type= protein_coding
chr6	41934985	41941755	41934985	41941755	-	ENST00000414200.6@CCND3	ENST00000414200.6	protein_coding	41941452,41937235,41936559,41934985	41941755,41937394,41936695,41936107	Gene ID= ENSG00000112576.12 TPM= 2.34 Transcript Type= protein_coding
chr6	42022415	42024412	42022415	42024412	+	transcript3057.chr6.nnic@NA	transcript3057.chr6.nnic	NA	42022415	42024412	Gene ID= novel_gene_chr6_3058 TPM= 4.67 Transcript Type= NA
chr6	42028278	42032044	42028278	42032044	+	transcript3059.chr6.nnic@NA	transcript3059.chr6.nnic	NA	42028278	42032044	Gene ID= novel_gene_chr6_3060 TPM= 3.5 Transcript Type= NA
chr6	42050531	42080909	42050531	42080909	+	transcript3061.chr6.nnic@TAF8	transcript3061.chr6.nnic	protein_coding	42050531,42051357,42055531,42055952,42057389,42066312,42068465,42077100,42077533,42079791	42050586,42051513,42055629,42056014,42057513,42066459,42068607,42077239,42078863,42080909	Gene ID= ENSG00000137413.15 TPM= 3.5 Transcript Type= NA
chr6	42050513	42057789	42050513	42057789	+	ENST00000372978.7@TAF8	ENST00000372978.7	protein_coding	42050513,42051357,42055531,42055952,42057389	42050586,42051513,42055629,42056014,42057789	Gene ID= ENSG00000137413.15 TPM= 1.17 Transcript Type= protein_coding
chr6	42059331	42062418	42059331	42062418	-	transcript3073.chr6.nnic@NA	transcript3073.chr6.nnic	NA	42059331	42062418	Gene ID= novel_gene_chr6_3074 TPM= 2.34 Transcript Type= NA
chr6	42084734	42087457	42084734	42087457	+	transcript3071.chr6.nnic@NA	transcript3071.chr6.nnic	NA	42084734	42087457	Gene ID= novel_gene_chr6_3072 TPM= 3.5 Transcript Type= NA
chr6	42126377	42142619	42126377	42142619	-	ENST00000356542.5@C6orf132	ENST00000356542.5	protein_coding	42142300,42128672,42126377	42142619,42128778,42126843	Gene ID= ENSG00000188112.8 TPM= 1.17 Transcript Type= protein_coding
chr6	42101118	42142444	42101118	42142444	-	ENST00000341865.8@C6orf132	ENST00000341865.8	protein_coding	42142300,42128672,42110216,42104463,42101118	42142444,42128778,42110291,42107583,42103878	Gene ID= ENSG00000188112.8 TPM= 5.84 Transcript Type= protein_coding
chr6	42206801	42217865	42206801	42217865	-	ENST00000053468.3@MRPS10	ENST00000053468.3	protein_coding	42217802,42214280,42214120,42211781,42210488,42208858,42206801	42217865,42214344,42214192,42211917,42210596,42208947,42208372	Gene ID= ENSG00000048544.5 TPM= 35.03 Transcript Type= protein_coding
chr6	42206801	42217869	42206801	42217869	-	transcript3079.chr6.nnic@MRPS10	transcript3079.chr6.nnic	protein_coding	42217802,42214280,42214120,42211781,42210488,42208858,42206801	42217869,42214344,42214218,42211917,42210596,42208947,42208372	Gene ID= ENSG00000048544.5 TPM= 3.5 Transcript Type= NA
chr6	42206801	42217869	42206801	42217869	-	transcript3084.chr6.nnic@MRPS10	transcript3084.chr6.nnic	protein_coding	42217802,42214280,42211781,42210488,42208858,42206801	42217869,42214344,42211917,42210596,42208947,42208372	Gene ID= ENSG00000048544.5 TPM= 4.67 Transcript Type= NA
chr6	42564062	42693504	42564062	42693504	+	ENST00000372901.1@UBR2	ENST00000372901.1	protein_coding	42564062,42573734,42592151,42594191,42603588,42605721,42606589,42612171,42615071,42616002,42617409,42632552,42632805,42635418,42637011,42640209,42641582,42642416,42644214,42644473,42645466,42648118,42650284,42652023,42652491,42655621,42658024,42658240,42658646,42659656,42662184,42663258,42665409,42666167,42670092,42670660,42673791,42674126,42676056,42676783,42678539,42679724,42683055,42684794,42688216,42689569,42691032	42564397,42573993,42592229,42594304,42603718,42605859,42606651,42612291,42615178,42616090,42617507,42632715,42632904,42635546,42637194,42640270,42641692,42642481,42644336,42644536,42645590,42648170,42650386,42652071,42652645,42655723,42658133,42658320,42658824,42659855,42662277,42663419,42665512,42666245,42670240,42670715,42673887,42674193,42676191,42676873,42678669,42679832,42683111,42684871,42688386,42689670,42693504	Gene ID= ENSG00000024048.10 TPM= 16.35 Transcript Type= protein_coding
chr6	42619455	42622317	42619455	42622317	-	transcript3094.chr6.nnic@NA	transcript3094.chr6.nnic	NA	42619455	42622317	Gene ID= novel_gene_chr6_3095 TPM= 5.84 Transcript Type= NA
chr6	42744481	42746096	42744481	42746096	-	ENST00000372876.1@TBCC	ENST00000372876.1	protein_coding	42744481	42746096	Gene ID= ENSG00000124659.6 TPM= 32.69 Transcript Type= protein_coding
chr6	42782725	42785574	42782725	42785574	+	transcript3100.chr6.nnic@NA	transcript3100.chr6.nnic	NA	42782725	42785574	Gene ID= novel_gene_chr6_3101 TPM= 7.01 Transcript Type= NA
chr6	42879920	42889889	42879920	42889889	+	transcript3107.chr6.nnic@RPL7L1	transcript3107.chr6.nnic	protein_coding	42879920,42880861,42883451,42884613,42885974,42886256,42888427	42879951,42880966,42883614,42884750,42886083,42886705,42889889	Gene ID= ENSG00000146223.14 TPM= 7.01 Transcript Type= NA
chr6	42879920	42887010	42879920	42887010	+	transcript3117.chr6.nic@RPL7L1	transcript3117.chr6.nic	protein_coding	42879920,42883451,42884613,42885974,42886256	42879951,42883614,42884750,42886083,42887010	Gene ID= ENSG00000146223.14 TPM= 3.5 Transcript Type= NA
chr6	42890265	42890816	42890265	42890816	-	ENST00000408925.3@C6orf226	ENST00000408925.3	protein_coding	42890265	42890816	Gene ID= ENSG00000221821.3 TPM= 4.67 Transcript Type= protein_coding
chr6	42923884	42925835	42923884	42925835	+	transcript3145.chr6.nic@PTCRA	transcript3145.chr6.nic	protein_coding	42923884,42925261	42924273,42925835	Gene ID= ENSG00000171611.9 TPM= 8.17 Transcript Type= NA
chr6	42926534	42939287	42926534	42939287	+	transcript3124.chr6.nnic@CNPY3	transcript3124.chr6.nnic	protein_coding	42926534,42934475,42935412,42935574,42937717,42938090,42938568	42929721,42934598,42935473,42935670,42937839,42938207,42939287	Gene ID= ENSG00000137161.16 TPM= 18.68 Transcript Type= NA
chr6	42929171	42939287	42929171	42939287	+	transcript3141.chr6.nnic@CNPY3	transcript3141.chr6.nnic	protein_coding	42929171,42935574,42937717,42938090,42938568	42929721,42935670,42937839,42938207,42939287	Gene ID= ENSG00000137161.16 TPM= 4.67 Transcript Type= NA
chr6	42929116	42936354	42929116	42936354	+	transcript3142.chr6.nnic@CNPY3	transcript3142.chr6.nnic	protein_coding	42929116,42934475,42935412,42935574	42929721,42934598,42935473,42936354	Gene ID= ENSG00000137161.16 TPM= 4.67 Transcript Type= NA
chr6	42929183	42936365	42929183	42936365	+	transcript3144.chr6.nic@CNPY3	transcript3144.chr6.nic	protein_coding	42929183,42934475,42935574	42929721,42934598,42936365	Gene ID= ENSG00000137161.16 TPM= 4.67 Transcript Type= NA
chr6	42929200	42939287	42929200	42939287	+	ENST00000372836.4@CNPY3	ENST00000372836.4	protein_coding	42929200,42934475,42935574,42937717,42938090,42938568	42929721,42934598,42935670,42937839,42938207,42939287	Gene ID= ENSG00000137161.16 TPM= 141.28 Transcript Type= protein_coding
chr6	42941184	42942264	42941184	42942264	-	transcript3146.chr6.nnic@NA	transcript3146.chr6.nnic	NA	42941184	42942264	Gene ID= novel_gene_chr6_3147 TPM= 3.5 Transcript Type= NA
chr6	42964008	42979198	42964008	42979198	-	transcript3151.chr6.nnic@PEX6	transcript3151.chr6.nnic	protein_coding	42978533,42974875,42974003,42969885,42969668,42968874,42968290,42967368,42966782,42966525,42966242,42966044,42965681,42965252,42965075,42964790,42964008	42979198,42975038,42974086,42969987,42969801,42968985,42968498,42967563,42966858,42966657,42966447,42966105,42965789,42965368,42965152,42964929,42964471	Gene ID= ENSG00000124587.13 TPM= 3.5 Transcript Type= NA
chr6	42963870	42979220	42963870	42979220	-	ENST00000304611.12@PEX6	ENST00000304611.12	protein_coding	42978269,42974875,42974003,42969885,42969668,42968874,42968290,42967368,42966782,42966525,42966242,42966044,42965681,42965252,42965075,42964790,42963870	42979220,42975038,42974086,42969987,42969801,42968985,42968498,42967563,42966858,42966657,42966447,42966105,42965789,42965368,42965152,42964929,42964471	Gene ID= ENSG00000124587.13 TPM= 4.67 Transcript Type= protein_coding
chr6	42984499	43012342	42984499	43012342	+	ENST00000485511.5@PPP2R5D	ENST00000485511.5	protein_coding	42984499,42989611,43006463,43006911,43007196,43007414,43007935,43008201,43008367,43008693,43009057,43009322,43010468,43010664,43010881,43011149	42984704,42989688,43006679,43007110,43007306,43007506,43008065,43008260,43008475,43008746,43009227,43009449,43010569,43010736,43010997,43012342	Gene ID= ENSG00000112640.14 TPM= 20.43 Transcript Type= protein_coding
chr6	42984553	43012342	42984553	43012342	+	ENST00000394110.7@PPP2R5D	ENST00000394110.7	protein_coding	42984553,42989611,43006463,43006934,43007196,43007414,43007935,43008201,43008367,43008693,43009057,43009322,43010468,43010664,43010881,43011149	42984704,42989688,43006606,43007110,43007306,43007506,43008065,43008260,43008475,43008746,43009227,43009449,43010569,43010736,43010997,43012342	Gene ID= ENSG00000112640.14 TPM= 14.59 Transcript Type= protein_coding
chr6	43012094	43013925	43012094	43013925	-	transcript3173.chr6.nnic@MEA1	transcript3173.chr6.nnic	protein_coding	43013898,43013115,43012926,43012094	43013925,43013389,43013028,43012621	Gene ID= ENSG00000124733.3 TPM= 4.29 Transcript Type= NA
chr6	43012094	43013968	43012094	43013968	-	ENST00000244711.3@MEA1	ENST00000244711.3	protein_coding	43013786,43013115,43012926,43012094	43013968,43013389,43013028,43012621	Gene ID= ENSG00000124733.3 TPM= 4.29 Transcript Type= protein_coding
chr6	43014213	43021298	43014213	43021298	+	ENST00000326974.8@KLHDC3	ENST00000326974.8	protein_coding	43014213,43017134,43017519,43017853,43018145,43018343,43018633,43018863,43019092,43019288,43020667	43014348,43017346,43017695,43017968,43018216,43018556,43018719,43018971,43019165,43019366,43021298	Gene ID= ENSG00000124702.17 TPM= 156.46 Transcript Type= protein_coding
chr6	43021645	43029597	43021645	43029597	+	ENST00000244496.5@RRP36	ENST00000244496.5	protein_coding	43021645,43024985,43025263,43026037,43027178,43027360,43029092	43021784,43025132,43025329,43026141,43027252,43027477,43029597	Gene ID= ENSG00000124541.6 TPM= 33.86 Transcript Type= protein_coding
chr6	43037620	43053913	43037620	43053913	-	transcript3193.chr6.nic@CUL7	transcript3193.chr6.nic	protein_coding	43053622,43052113,43051612,43050968,43050260,43049963,43049407,43048332,43048148,43046880,43046511,43046236,43045986,43045587,43045227,43044752,43043448,43043074,43042802,43040915,43040530,43040156,43038842,43038566,43038267,43037620	43053913,43052796,43051763,43051468,43050398,43050159,43049662,43048569,43048253,43047107,43046601,43046407,43046091,43045682,43045402,43044885,43043630,43043180,43042984,43041075,43040746,43040426,43038987,43038692,43038472,43038011	Gene ID= ENSG00000044090.8 TPM= 8.17 Transcript Type= NA
chr6	43037620	43053945	43037620	43053945	-	ENST00000535468.1@CUL7	ENST00000535468.1	protein_coding	43053711,43052113,43051612,43050968,43050260,43049963,43049407,43048332,43048148,43046880,43046511,43046236,43045986,43045587,43045227,43044752,43043448,43043074,43042802,43040915,43040530,43040156,43038842,43038566,43038267,43037620	43053945,43052796,43051763,43051468,43050398,43050159,43049662,43048569,43048253,43047107,43046601,43046407,43046091,43045682,43045402,43044885,43043630,43043180,43042984,43041075,43040746,43040426,43038987,43038692,43038472,43038011	Gene ID= ENSG00000044090.8 TPM= 6.42 Transcript Type= protein_coding
chr6	43037620	43053905	43037620	43053905	-	transcript3196.chr6.nic@CUL7	transcript3196.chr6.nic	protein_coding	43053711,43052209,43051612,43050968,43050260,43049963,43049407,43048332,43048148,43046880,43046511,43046236,43045986,43045587,43045227,43044752,43043448,43043074,43042802,43040915,43040530,43040156,43038842,43038566,43038267,43037620	43053905,43052796,43051763,43051468,43050398,43050159,43049662,43048569,43048253,43047107,43046601,43046407,43046091,43045682,43045402,43044885,43043630,43043180,43042984,43041075,43040746,43040426,43038987,43038692,43038472,43038011	Gene ID= ENSG00000044090.8 TPM= 8.76 Transcript Type= NA
chr6	43059594	43075099	43059594	43075099	+	ENST00000347162.9@KLC4	ENST00000347162.9	protein_coding	43059594,43061311,43062917,43065620,43066306,43066996,43070354,43070692,43071275,43071567,43071852,43072147,43072824,43073223,43073902,43074622	43059685,43061593,43063147,43065701,43066525,43067083,43070455,43070865,43071374,43071619,43071922,43072255,43072964,43073338,43073965,43075099	Gene ID= ENSG00000137171.14 TPM= 18.3 Transcript Type= protein_coding
chr6	43059857	43075093	43059857	43075093	+	ENST00000259708.7@KLC4	ENST00000259708.7	protein_coding	43059857,43061311,43062917,43065620,43066306,43066996,43070354,43070692,43071275,43071567,43071852,43072147,43072824,43073223,43073902,43074622	43060238,43061593,43063147,43065701,43066525,43067083,43070455,43070865,43071374,43071619,43071922,43072255,43072964,43073338,43073965,43075093	Gene ID= ENSG00000137171.14 TPM= 2.72 Transcript Type= protein_coding
chr6	43060484	43075093	43060484	43075093	+	transcript3215.chr6.nic@KLC4	transcript3215.chr6.nic	protein_coding	43060484,43061311,43062917,43065620,43066306,43066996,43070354,43070692,43071275,43071567,43071852,43072147,43072824,43073223,43073902,43074622	43060605,43061593,43063147,43065701,43066525,43067083,43070455,43070865,43071374,43071619,43071922,43072255,43072964,43073338,43073965,43075093	Gene ID= ENSG00000137171.14 TPM= 12.06 Transcript Type= NA
chr6	43059883	43075089	43059883	43075089	+	ENST00000479388.5@KLC4	ENST00000479388.5	protein_coding	43059883,43061311,43062917,43065620,43066306,43066996,43070354,43070692,43071275,43071567,43071852,43072147,43072824,43073223,43073902,43074622	43060182,43061593,43063147,43065701,43066525,43067083,43070455,43070865,43071374,43071619,43071922,43072255,43072964,43073338,43073965,43075089	Gene ID= ENSG00000137171.14 TPM= 6.62 Transcript Type= protein_coding
chr6	43054235	43059434	43054235	43059434	-	ENST00000489623.1@MRPL2	ENST00000489623.1	protein_coding	43059286,43058065,43054235	43059434,43058233,43054486	Gene ID= ENSG00000112651.11 TPM= 3.5 Transcript Type= protein_coding
chr6	43054232	43059394	43054232	43059394	-	ENST00000230413.9@MRPL2	ENST00000230413.9	protein_coding	43059286,43058065,43056307,43056081,43055897,43054232	43059394,43058233,43056445,43056196,43056007,43054486	Gene ID= ENSG00000112651.11 TPM= 2.34 Transcript Type= protein_coding
chr6	43076268	43161719	43076268	43161719	+	ENST00000230419.8@PTK7	ENST00000230419.8	protein_coding	43076268,43128977,43129727,43130230,43130511,43132016,43132421,43138849,43139136,43139406,43141668,43141931,43142172,43143417,43144451,43145200,43146618,43158817,43159788,43160721	43076567,43129264,43129829,43130420,43130661,43132164,43132687,43138982,43139271,43139525,43141817,43142081,43142299,43143620,43144606,43145432,43146698,43158968,43159966,43161719	Gene ID= ENSG00000112655.15 TPM= 200.83 Transcript Type= protein_coding
chr6	43076342	43161712	43076342	43161712	+	ENST00000349241.6@PTK7	ENST00000349241.6	protein_coding	43076342,43128977,43129727,43130230,43130511,43132016,43132421,43141668,43141931,43142172,43143417,43144451,43145200,43146618,43158817,43159788,43160721	43076567,43129264,43129829,43130420,43130661,43132164,43132687,43141817,43142081,43142299,43143620,43144606,43145432,43146698,43158968,43159966,43161712	Gene ID= ENSG00000112655.15 TPM= 10.51 Transcript Type= protein_coding
chr6	43076339	43133721	43076339	43133721	+	ENST00000471863.5@PTK7	ENST00000471863.5	protein_coding	43076339,43128977,43129727,43130230,43130511,43132016,43132421	43076567,43129264,43129829,43130420,43130661,43132164,43133721	Gene ID= ENSG00000112655.15 TPM= 1.17 Transcript Type= protein_coding
chr6	43171299	43181507	43171299	43181507	+	ENST00000265354.5@SRF	ENST00000265354.5	protein_coding	43171299,43173847,43175706,43176548,43178294,43178806,43179095	43172169,43174113,43175967,43176667,43178485,43178882,43181507	Gene ID= ENSG00000112658.7 TPM= 15.18 Transcript Type= protein_coding
chr6	43225629	43229484	43225629	43229484	-	ENST00000230431.10@DNPH1	ENST00000230431.10	protein_coding	43229261,43226327,43226033,43225629	43229484,43226395,43226143,43225881	Gene ID= ENSG00000112667.12 TPM= 37.95 Transcript Type= protein_coding
chr6	43225635	43229478	43225635	43229478	-	ENST00000393987.2@DNPH1	ENST00000393987.2	protein_coding	43229261,43226327,43225635	43229478,43226395,43226143	Gene ID= ENSG00000112667.12 TPM= 4.09 Transcript Type= protein_coding
chr6	43331489	43369751	43331489	43369751	-	transcript3282.chr6.nic@ZNF318	transcript3282.chr6.nic	protein_coding	43368967,43365292,43357126,43354664,43352377,43348324,43342676,43331489	43369751,43365440,43357765,43356145,43352476,43348625,43342879,43331852	Gene ID= ENSG00000171467.15 TPM= 4.67 Transcript Type= NA
chr6	43427549	43450426	43427549	43450426	+	transcript3244.chr6.nic@ABCC10	transcript3244.chr6.nic	protein_coding	43427549,43427968,43432142,43434621,43435751,43436138,43437934,43438624,43441862,43442970,43443933,43444159,43444788,43445125,43445599,43446277,43447248,43447684,43448881,43449107,43449422,43449929	43427699,43428139,43433360,43434848,43435907,43436247,43438013,43438795,43441960,43443159,43444010,43444353,43444938,43445314,43445942,43446446,43447408,43447937,43449026,43449204,43449534,43450426	Gene ID= ENSG00000124574.14 TPM= 6.81 Transcript Type= NA
chr6	43427880	43450426	43427880	43450426	+	transcript3253.chr6.nic@ABCC10	transcript3253.chr6.nic	protein_coding	43427880,43432142,43434621,43435751,43436138,43437934,43438624,43441862,43442970,43443933,43444159,43444788,43445125,43445599,43446277,43447248,43447684,43448881,43449107,43449422,43449929	43428139,43433360,43434848,43435907,43436247,43438013,43438795,43441960,43443159,43444010,43444353,43444938,43445314,43445942,43446446,43447408,43447937,43449026,43449204,43449534,43450426	Gene ID= ENSG00000124574.14 TPM= 5.64 Transcript Type= NA
chr6	43427554	43450430	43427554	43450430	+	ENST00000372530.8@ABCC10	ENST00000372530.8	protein_coding	43427554,43427968,43432142,43434621,43435751,43436138,43437934,43438624,43441862,43442970,43443933,43444159,43444788,43445125,43445599,43446277,43447248,43447684,43448881,43449107,43449422,43449929	43427757,43428139,43433360,43434848,43435907,43436247,43438013,43438795,43441960,43443159,43444010,43444353,43444938,43445314,43445942,43446446,43447408,43447937,43449026,43449204,43449534,43450430	Gene ID= ENSG00000124574.14 TPM= 10.89 Transcript Type= protein_coding
chr6	43477523	43506556	43477523	43506556	+	ENST00000372444.6@TJAP1	ENST00000372444.6	protein_coding	43477523,43478087,43478659,43497881,43498978,43500744,43501526,43502283,43503401,43503623,43504761	43477628,43478232,43478718,43497977,43499100,43500772,43501687,43502349,43503508,43503706,43506556	Gene ID= ENSG00000137221.14 TPM= 5.84 Transcript Type= protein_coding
chr6	43477567	43506553	43477567	43506553	+	transcript3262.chr6.nic@TJAP1	transcript3262.chr6.nic	protein_coding	43477567,43478087,43497881,43498975,43500744,43501526,43502283,43503401,43503623,43504761	43477628,43478232,43497977,43499100,43500772,43501687,43502349,43503508,43503706,43506553	Gene ID= ENSG00000137221.14 TPM= 10.51 Transcript Type= NA
chr6	43477567	43506553	43477567	43506553	+	transcript3266.chr6.nic@TJAP1	transcript3266.chr6.nic	protein_coding	43477567,43478137,43497881,43498978,43500744,43501526,43502283,43503401,43503623,43504761	43477628,43478232,43497977,43499100,43500772,43501687,43502349,43503508,43503706,43506553	Gene ID= ENSG00000137221.14 TPM= 7.01 Transcript Type= NA
chr6	43477523	43506556	43477523	43506556	+	ENST00000436109.6@TJAP1	ENST00000436109.6	protein_coding	43477523,43497881,43498978,43500744,43501526,43502283,43503401,43503623,43504761	43477628,43497977,43499100,43500772,43501687,43502349,43503508,43503706,43506556	Gene ID= ENSG00000137221.14 TPM= 5.84 Transcript Type= protein_coding
chr6	43477573	43506553	43477573	43506553	+	ENST00000372452.5@TJAP1	ENST00000372452.5	protein_coding	43477573,43478087,43497881,43498978,43500744,43501526,43502283,43503401,43503623,43504761	43477628,43478232,43497977,43499100,43500772,43501687,43502349,43503508,43503706,43506553	Gene ID= ENSG00000137221.14 TPM= 17.51 Transcript Type= protein_coding
chr6	43506969	43510686	43506969	43510686	-	ENST00000372441.1@LRRC73	ENST00000372441.1	protein_coding	43509514,43508760,43508298,43507826,43507456,43506969	43510686,43508920,43508420,43507926,43507678,43507308	Gene ID= ENSG00000204052.4 TPM= 2.34 Transcript Type= protein_coding
chr6	43517022	43521526	43517022	43521526	+	ENST00000372389.7@POLR1C	ENST00000372389.7	protein_coding	43517022,43517306,43519333,43519706,43520066,43520275,43520625,43520932,43521182	43517178,43517377,43519440,43519838,43520185,43520427,43520774,43521048,43521526	Gene ID= ENSG00000171453.17 TPM= 12.06 Transcript Type= protein_coding
chr6	43517089	43529585	43517089	43529585	+	ENST00000304004.7@POLR1C	ENST00000304004.7	protein_coding	43517089,43517306,43519333,43519706,43520066,43520275,43520625,43520932,43529249	43517178,43517377,43519440,43519838,43520185,43520427,43520774,43521048,43529585	Gene ID= ENSG00000171453.17 TPM= 7.01 Transcript Type= protein_coding
chr6	43517088	43521506	43517088	43521506	+	transcript3281.chr6.nic@POLR1C	transcript3281.chr6.nic	protein_coding	43517088,43517306,43519333,43519706,43520275,43520625,43520932,43521182	43517178,43517377,43519440,43520185,43520427,43520774,43521048,43521506	Gene ID= ENSG00000171453.17 TPM= 3.89 Transcript Type= NA
chr6	43517088	43521506	43517088	43521506	+	transcript3287.chr6.nic@POLR1C	transcript3287.chr6.nic	protein_coding	43517088,43517306,43519333,43520275,43520625,43520932,43521182	43517178,43517377,43520185,43520427,43520774,43521048,43521506	Gene ID= ENSG00000171453.17 TPM= 2.72 Transcript Type= NA
chr6	43511827	43517008	43511827	43517008	-	transcript3273.chr6.nic@YIPF3	transcript3273.chr6.nic	protein_coding	43516727,43515889,43515595,43513588,43513359,43513069,43512761,43512440,43511827	43517008,43516095,43515701,43513633,43513451,43513098,43512874,43512563,43512315	Gene ID= ENSG00000137207.11 TPM= 7.59 Transcript Type= NA
chr6	43511827	43516990	43511827	43516990	-	ENST00000372422.6@YIPF3	ENST00000372422.6	protein_coding	43516727,43515889,43515595,43513588,43513359,43513069,43512761,43512440,43511827	43516990,43516095,43515701,43513633,43513451,43513200,43512874,43512563,43512315	Gene ID= ENSG00000137207.11 TPM= 209.58 Transcript Type= protein_coding
chr6	43522330	43576075	43522330	43576075	-	ENST00000265351.11@XPO5	ENST00000265351.11	protein_coding	43575760,43573480,43572506,43570857,43570502,43568711,43567169,43565660,43562247,43560924,43560178,43558501,43555836,43553373,43551298,43549893,43549489,43548261,43547608,43546571,43533907,43531479,43530688,43528828,43528159,43527634,43526685,43525839,43525107,43524831,43524471,43522330	43576075,43573601,43572578,43570994,43570684,43568737,43567354,43565736,43562346,43561007,43560303,43558591,43555964,43553503,43551453,43549934,43549578,43548460,43547707,43546752,43534007,43531575,43530824,43528925,43528205,43527731,43526747,43525921,43525214,43524968,43524635,43524005	Gene ID= ENSG00000124571.17 TPM= 9.34 Transcript Type= protein_coding
chr6	43523849	43576051	43523849	43576051	-	transcript3242.chr6.nic@XPO5	transcript3242.chr6.nic	protein_coding	43575760,43573480,43572506,43570857,43570502,43568711,43567169,43565660,43562247,43560924,43560178,43558501,43555836,43553373,43551298,43549893,43549489,43548261,43547608,43546571,43533907,43531479,43530688,43528828,43528159,43526685,43525839,43524831,43524471,43523849	43576051,43573601,43572578,43570994,43570684,43568737,43567354,43565736,43562346,43561007,43560303,43558591,43555964,43553503,43551453,43549934,43549578,43548460,43547707,43546752,43534007,43531575,43530824,43528925,43528205,43527731,43525921,43525214,43524635,43524005	Gene ID= ENSG00000124571.17 TPM= 2.34 Transcript Type= NA
chr6	43576150	43615660	43576150	43615660	+	ENST00000372236.8@POLH	ENST00000372236.8	protein_coding	43576150,43582316,43583007,43587272,43597696,43600988,43603892,43604615,43605254,43610554,43613660	43576440,43582456,43583141,43587489,43597865,43601091,43604011,43604738,43605319,43610723,43615660	Gene ID= ENSG00000170734.11 TPM= 2.34 Transcript Type= protein_coding
chr6	43620490	43629253	43620490	43629253	-	transcript3299.chr6.nnic@GTPBP2	transcript3299.chr6.nnic	protein_coding	43628977,43626922,43626226,43625756,43625363,43624888,43624510,43623933,43623737,43622633,43622003,43620490	43629253,43626948,43626410,43625864,43625560,43625062,43624729,43624041,43623795,43622804,43622167,43621790	Gene ID= ENSG00000172432.18 TPM= 5.92 Transcript Type= NA
chr6	43620490	43629253	43620490	43629253	-	transcript3308.chr6.nic@GTPBP2	transcript3308.chr6.nic	protein_coding	43628977,43626922,43626226,43625756,43624888,43624510,43623933,43623737,43622633,43622003,43620490	43629253,43626948,43626410,43625864,43625560,43624729,43624068,43623795,43622804,43622167,43621790	Gene ID= ENSG00000172432.18 TPM= 6.42 Transcript Type= NA
chr6	43620490	43623311	43620490	43623311	-	transcript3309.chr6.nic@GTPBP2	transcript3309.chr6.nic	protein_coding	43622633,43622003,43620490	43623311,43622167,43621790	Gene ID= ENSG00000172432.18 TPM= 8.25 Transcript Type= NA
chr6	43620490	43623311	43620490	43623311	-	transcript3310.chr6.nic@GTPBP2	transcript3310.chr6.nic	protein_coding	43622003,43620490	43623311,43621790	Gene ID= ENSG00000172432.18 TPM= 7.47 Transcript Type= NA
chr6	43620490	43629162	43620490	43629162	-	ENST00000307126.9@GTPBP2	ENST00000307126.9	protein_coding	43628977,43626922,43626226,43625756,43625363,43624888,43624510,43623933,43623737,43622633,43622003,43620490	43629162,43626948,43626410,43625864,43625560,43625062,43624729,43624068,43623795,43622804,43622167,43621790	Gene ID= ENSG00000172432.18 TPM= 14.68 Transcript Type= protein_coding
chr6	43617847	43619102	43617847	43619102	+	transcript3311.chr6.nnic@NA	transcript3311.chr6.nnic	NA	43617847	43619102	Gene ID= novel_gene_chr6_3312 TPM= 3.5 Transcript Type= NA
chr6	43618968	43620520	43618968	43620520	+	transcript3313.chr6.nnic@NA	transcript3313.chr6.nnic	NA	43618968	43620520	Gene ID= novel_gene_chr6_3314 TPM= 2.34 Transcript Type= NA
chr6	43620494	43623311	43620494	43623311	-	transcript3315.chr6.nnic@NA	transcript3315.chr6.nnic	NA	43620494	43623311	Gene ID= novel_gene_chr6_3316 TPM= 8.64 Transcript Type= NA
chr6	43635819	43640952	43635819	43640952	+	ENST00000372171.4@MAD2L1BP	ENST00000372171.4	protein_coding	43635819,43636381,43640021	43635921,43636646,43640952	Gene ID= ENSG00000124688.13 TPM= 18.68 Transcript Type= protein_coding
chr6	43671303	43687791	43671303	43687791	-	ENST00000372133.7@MRPS18A	ENST00000372133.7	protein_coding	43687668,43681089,43678518,43675494,43675202,43671303	43687791,43681120,43678625,43675617,43675271,43671906	Gene ID= ENSG00000096080.11 TPM= 23.35 Transcript Type= protein_coding
chr6	43998867	43999552	43998867	43999552	+	transcript3358.chr6.nnic@NA	transcript3358.chr6.nnic	NA	43998867	43999552	Gene ID= novel_gene_chr6_3359 TPM= 2.34 Transcript Type= NA
chr6	44000600	44005958	44000600	44005958	+	ENST00000336600.5@C6orf223	ENST00000336600.5	protein_coding	44000600,44001017,44002053,44002681	44000700,44001143,44002127,44005958	Gene ID= ENSG00000181577.15 TPM= 5.06 Transcript Type= protein_coding
chr6	44000617	44005108	44000617	44005108	+	ENST00000439969.2@C6orf223	ENST00000439969.2	protein_coding	44000617,44000974,44002053,44002681	44000700,44001143,44002127,44005108	Gene ID= ENSG00000181577.15 TPM= 12.06 Transcript Type= protein_coding
chr6	44000580	44005150	44000580	44005150	+	ENST00000442114.6@C6orf223	ENST00000442114.6	protein_coding	44000580,44002053,44002681	44001143,44002127,44005150	Gene ID= ENSG00000181577.15 TPM= 17.9 Transcript Type= protein_coding
chr6	44113640	44127393	44113640	44127393	-	transcript3392.chr6.nnic@MRPL14	transcript3392.chr6.nnic	protein_coding	44127255,44116541,44113640	44127393,44116629,44114209	Gene ID= ENSG00000180992.6 TPM= 3.5 Transcript Type= NA
chr6	44113694	44127136	44113694	44127136	-	transcript3394.chr6.nnic@MRPL14	transcript3394.chr6.nnic	protein_coding	44125953,44116541,44113694	44127136,44116629,44114209	Gene ID= ENSG00000180992.6 TPM= 8.17 Transcript Type= NA
chr6	44113454	44127457	44113454	44127457	-	ENST00000372014.4@MRPL14	ENST00000372014.4	protein_coding	44127344,44116541,44113454	44127457,44116629,44114209	Gene ID= ENSG00000180992.6 TPM= 7.01 Transcript Type= protein_coding
chr6	44127644	44155519	44127644	44155519	+	transcript3382.chr6.nic@TMEM63B	transcript3382.chr6.nic	protein_coding	44127644,44134561,44135017,44135328,44136349,44138480,44139467,44139708,44140252,44141028,44146847,44147377,44148252,44148513,44148792,44149859,44150224,44150564,44151846,44152593,44153676,44154073,44154365,44154692	44127866,44134743,44135096,44135366,44136439,44138517,44139609,44139759,44140360,44141098,44146927,44147500,44148385,44148650,44148945,44149965,44150310,44150629,44152008,44152698,44153843,44154188,44154445,44155519	Gene ID= ENSG00000137216.18 TPM= 50.97 Transcript Type= NA
chr6	44127624	44155519	44127624	44155519	+	transcript3385.chr6.nic@TMEM63B	transcript3385.chr6.nic	protein_coding	44127624,44134561,44135017,44135328,44136349,44138480,44139467,44139708,44140252,44141028,44146847,44147377,44148252,44148513,44148792,44149859,44150224,44150564,44151846,44152593,44154073,44154365,44154692	44127678,44134743,44135096,44135366,44136439,44138517,44139609,44139759,44140360,44141098,44146927,44147500,44148385,44148650,44148945,44149965,44150310,44150629,44152008,44153843,44154188,44154445,44155519	Gene ID= ENSG00000137216.18 TPM= 11.27 Transcript Type= NA
chr6	44126914	44155519	44126914	44155519	+	ENST00000259746.13@TMEM63B	ENST00000259746.13	protein_coding	44126914,44134561,44135017,44135328,44136349,44138480,44139467,44139708,44140252,44141028,44146847,44147377,44148252,44148513,44148792,44149859,44150224,44150564,44151846,44152593,44153676,44154073,44154365,44154692	44127072,44134743,44135096,44135366,44136439,44138517,44139609,44139759,44140360,44141098,44146927,44147500,44148385,44148650,44148945,44149965,44150310,44150629,44152008,44152698,44153843,44154188,44154445,44155519	Gene ID= ENSG00000137216.18 TPM= 21.78 Transcript Type= protein_coding
chr6	44127639	44155518	44127639	44155518	+	ENST00000323267.10@TMEM63B	ENST00000323267.10	protein_coding	44127639,44134561,44135017,44135328,44136349,44138480,44139467,44139708,44140252,44141028,44146847,44147377,44148252,44148513,44148792,44149859,44150224,44150564,44151846,44152593,44153676,44154073,44154365,44154692	44127678,44134743,44135096,44135366,44136439,44138517,44139609,44139759,44140360,44141098,44146927,44147500,44148385,44148650,44148945,44149965,44150310,44150629,44152008,44152698,44153843,44154188,44154445,44155518	Gene ID= ENSG00000137216.18 TPM= 44.05 Transcript Type= protein_coding
chr6	44176565	44184402	44176565	44184402	+	transcript3399.chr6.nnic@CAPN11	transcript3399.chr6.nnic	protein_coding	44176565,44176838,44177242,44179619,44179952,44180460,44180597,44180748,44180933,44181252,44182941,44183119,44183705,44183906	44176655,44176998,44177420,44179630,44180163,44180499,44180662,44180805,44180997,44181320,44183019,44183161,44183763,44184402	Gene ID= ENSG00000137225.12 TPM= 2.34 Transcript Type= NA
chr6	44223565	44234141	44223565	44234141	+	ENST00000371740.9@SLC29A1	ENST00000371740.9	protein_coding	44223565,44226061,44227263,44229390,44229589,44229907,44230347,44230568,44230811,44231364,44231998,44232343,44232807,44233417	44223641,44226167,44227342,44229471,44229791,44230046,44230481,44230665,44230889,44231461,44232106,44232428,44233006,44234141	Gene ID= ENSG00000112759.16 TPM= 4.23 Transcript Type= protein_coding
chr6	44223626	44234151	44223626	44234151	+	ENST00000393841.5@SLC29A1	ENST00000393841.5	protein_coding	44223626,44226061,44227260,44229390,44229589,44229907,44230347,44230568,44230811,44231364,44231998,44232343,44232807,44233417	44223955,44226167,44227342,44229471,44229791,44230046,44230481,44230665,44230889,44231461,44232106,44232428,44233006,44234151	Gene ID= ENSG00000112759.16 TPM= 2.04 Transcript Type= protein_coding
chr6	44223565	44234141	44223565	44234141	+	ENST00000371755.7@SLC29A1	ENST00000371755.7	protein_coding	44223565,44227263,44229390,44229589,44229907,44230347,44230568,44230811,44231364,44231998,44232343,44232807,44233417	44223641,44227342,44229471,44229791,44230046,44230481,44230665,44230889,44231461,44232106,44232428,44233006,44234141	Gene ID= ENSG00000112759.16 TPM= 6.56 Transcript Type= protein_coding
chr6	44219656	44234150	44219656	44234150	+	ENST00000427851.6@SLC29A1	ENST00000427851.6	protein_coding	44219656,44227263,44229390,44229589,44229907,44230347,44230568,44230811,44231364,44231998,44232343,44232807,44233417	44219782,44227342,44229471,44229791,44230046,44230481,44230665,44230889,44231461,44232106,44232428,44233006,44234150	Gene ID= ENSG00000112759.16 TPM= 13.79 Transcript Type= protein_coding
chr6	44247087	44253883	44247087	44253883	+	ENST00000353801.7@HSP90AB1	ENST00000353801.7	protein_coding	44247087,44248617,44249377,44249675,44250021,44250291,44251048,44251418,44251737,44251999,44253045,44253489	44247195,44248776,44249583,44249834,44250154,44250599,44251213,44251608,44251884,44252267,44253378,44253883	Gene ID= ENSG00000096384.19 TPM= 31.06 Transcript Type= protein_coding
chr6	44247087	44253886	44247087	44253886	+	ENST00000371646.9@HSP90AB1	ENST00000371646.9	protein_coding	44247087,44248630,44249377,44249675,44250021,44250291,44251048,44251418,44251737,44251999,44253045,44253489	44247195,44248776,44249583,44249834,44250154,44250599,44251213,44251608,44251884,44252267,44253378,44253886	Gene ID= ENSG00000096384.19 TPM= 2611.15 Transcript Type= protein_coding
chr6	44247866	44253883	44247866	44253883	+	ENST00000371554.2@HSP90AB1	ENST00000371554.2	protein_coding	44247866,44248630,44249377,44249675,44250021,44250291,44251048,44251418,44251737,44251999,44253045,44253489	44248079,44248776,44249583,44249834,44250154,44250599,44251213,44251608,44251884,44252267,44253378,44253883	Gene ID= ENSG00000096384.19 TPM= 22.88 Transcript Type= protein_coding
chr6	44254102	44257352	44254102	44257352	-	ENST00000619636.4@SLC35B2	ENST00000619636.4	protein_coding	44257182,44256685,44256342,44254102	44257352,44256878,44256496,44255644	Gene ID= ENSG00000157593.18 TPM= 7.59 Transcript Type= protein_coding
chr6	44254106	44257554	44254106	44257554	-	ENST00000393812.3@SLC35B2	ENST00000393812.3	protein_coding	44257400,44256685,44256342,44254106	44257554,44256878,44256496,44255644	Gene ID= ENSG00000157593.18 TPM= 144.2 Transcript Type= protein_coding
chr6	44254100	44257503	44254100	44257503	-	transcript3474.chr6.nnic@NA	transcript3474.chr6.nnic	NA	44254100	44257503	Gene ID= novel_gene_chr6_3475 TPM= 3.5 Transcript Type= NA
chr6	44258166	44265788	44258166	44265788	-	ENST00000275015.9@NFKBIE	ENST00000275015.9	protein_coding	44264982,44262560,44261626,44260451,44260043,44258166	44265788,44262662,44261848,44260539,44260282,44259284	Gene ID= ENSG00000146232.15 TPM= 2.34 Transcript Type= protein_coding
chr6	44299654	44313326	44299654	44313326	-	ENST00000244571.4@AARS2	ENST00000244571.4	protein_coding	44313081,44312072,44311390,44310994,44310299,44307249,44306923,44306494,44306280,44305653,44305054,44304645,44304420,44304181,44303286,44303066,44302802,44302391,44302060,44301381,44301156,44299654	44313326,44312263,44311535,44311161,44310443,44307394,44307031,44306532,44306391,44305786,44305198,44304817,44304533,44304321,44303423,44303175,44302910,44302513,44302170,44301464,44301266,44300711	Gene ID= ENSG00000124608.4 TPM= 9.34 Transcript Type= protein_coding
chr6	44387525	44450426	44387525	44450426	+	ENST00000371477.3@CDC5L	ENST00000371477.3	protein_coding	44387525,44390268,44392667,44393446,44396341,44403809,44406323,44408444,44419449,44422647,44424419,44426103,44426482,44429713,44445655,44446607	44387868,44390371,44392828,44393573,44396440,44404027,44406467,44408632,44419597,44422809,44424583,44426183,44426724,44429910,44445867,44450426	Gene ID= ENSG00000096401.7 TPM= 33.86 Transcript Type= protein_coding
chr6	44429016	44448054	44429016	44448054	+	transcript3497.chr6.nic@CDC5L	transcript3497.chr6.nic	protein_coding	44429016,44445655,44446607	44429910,44445867,44448054	Gene ID= ENSG00000096401.7 TPM= 3.5 Transcript Type= NA
chr6	44396526	44399073	44396526	44399073	-	transcript3500.chr6.nnic@NA	transcript3500.chr6.nnic	NA	44396526	44399073	Gene ID= novel_gene_chr6_3501 TPM= 2.34 Transcript Type= NA
chr6	44809317	45377953	44809317	45377953	-	ENST00000475057.5@SUPT3H	ENST00000475057.5	protein_coding	45377768,45365201,45105922,45020546,45014801,45003653,44961753,44954495,44953310,44932653,44829764,44809317	45377953,45365301,45106006,45020632,45014891,45003792,44961828,44954607,44953417,44932763,44829857,44809501	Gene ID= ENSG00000196284.15 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr6	44829718	45106010	44829718	45106010	-	transcript3503.chr6.nic@SUPT3H	transcript3503.chr6.nic	protein_coding	45105922,45020546,45014801,45003653,44961753,44954495,44953310,44932653,44829718	45106010,45020632,45014891,45003792,44961828,44954607,44953417,44932763,44829857	Gene ID= ENSG00000196284.15 TPM= 3.5 Transcript Type= NA
chr6	45421080	45423312	45421080	45423312	-	transcript3505.chr6.nnic@NA	transcript3505.chr6.nnic	NA	45421080	45423312	Gene ID= novel_gene_chr6_3506 TPM= 4.67 Transcript Type= NA
chr6	45911626	46015873	45911626	46015873	-	transcript3512.chr6.nnic@CLIC5	transcript3512.chr6.nnic	protein_coding	46015480,45955135,45949256,45941547,45914228,45913778,45911626	46015873,45955244,45949381,45941653,45914409,45913812,45912739	Gene ID= ENSG00000112782.15 TPM= 2.92 Transcript Type= NA
chr6	45939218	46015873	45939218	46015873	-	transcript3521.chr6.nic@CLIC5	transcript3521.chr6.nic	protein_coding	46015480,45955135,45949256,45939218	46015873,45955244,45949381,45941653	Gene ID= ENSG00000112782.15 TPM= 6.42 Transcript Type= NA
chr6	45901761	46015849	45901761	46015849	-	ENST00000339561.10@CLIC5	ENST00000339561.10	protein_coding	46015480,45955135,45949256,45941547,45914228,45901761	46015849,45955244,45949381,45941653,45914409,45903255	Gene ID= ENSG00000112782.15 TPM= 25.69 Transcript Type= protein_coding
chr6	46129993	46146699	46129993	46146699	+	ENST00000321037.4@ENPP4	ENST00000321037.4	protein_coding	46129993,46139551,46141052,46143276	46130189,46140409,46141222,46146699	Gene ID= ENSG00000001561.6 TPM= 17.51 Transcript Type= protein_coding
chr6	46160415	46170971	46160415	46170971	-	ENST00000230565.3@ENPP5	ENST00000230565.3	protein_coding	46170808,46167434,46165387,46160415	46170971,46168297,46165563,46161753	Gene ID= ENSG00000112796.9 TPM= 16.35 Transcript Type= protein_coding
chr6	46221468	46325672	46221468	46325672	-	ENST00000405162.2@RCAN2	ENST00000405162.2	protein_coding	46325393,46248723,46246748,46223144,46221468	46325672,46248896,46246919,46223301,46223140	Gene ID= ENSG00000172348.14 TPM= 3.5 Transcript Type= protein_coding
chr6	46220736	46325668	46220736	46325668	-	ENST00000330430.10@RCAN2	ENST00000330430.10	protein_coding	46325393,46248723,46246748,46220736	46325668,46248896,46246919,46223301	Gene ID= ENSG00000172348.14 TPM= 38.53 Transcript Type= protein_coding
chr6	46549804	46652786	46549804	46652786	-	ENST00000275016.2@CYP39A1	ENST00000275016.2	protein_coding	46652406,46642163,46639494,46637829,46636389,46630963,46625418,46595987,46588034,46587077,46553767,46549804	46652786,46642298,46639668,46637978,46636482,46631070,46625508,46596120,46588129,46587165,46553854,46550437	Gene ID= ENSG00000146233.7 TPM= 3.5 Transcript Type= protein_coding
chr6	46852599	46922013	46852599	46922013	-	transcript3557.chr6.nnic@ADGRF5	transcript3557.chr6.nnic	protein_coding	46921713,46906661,46900029,46888335,46884095,46883559,46882049,46881455,46879818,46878202,46871843,46869247,46868883,46866925,46865042,46862888,46860715,46858129,46856867,46856718,46855974,46852599	46922013,46906786,46900083,46888505,46884271,46883665,46882107,46881597,46880039,46878405,46872013,46869366,46869092,46867137,46865197,46863096,46860894,46859523,46856908,46856777,46856058,46854071	Gene ID= ENSG00000069122.18 TPM= 13.71 Transcript Type= NA
chr6	46852599	46955002	46852599	46955002	-	transcript3558.chr6.nnic@ADGRF5	transcript3558.chr6.nnic	protein_coding	46954734,46906661,46900029,46888335,46884095,46883559,46882049,46881455,46879818,46878202,46871843,46869247,46868883,46866925,46865042,46862888,46860715,46858129,46856867,46856718,46855974,46852599	46955002,46906786,46900083,46888505,46884271,46883665,46882107,46881597,46880039,46878405,46872013,46869366,46869092,46867137,46865197,46863096,46860894,46859523,46856908,46856777,46856058,46854071	Gene ID= ENSG00000069122.18 TPM= 11.66 Transcript Type= NA
chr6	46852599	46954943	46852599	46954943	-	ENST00000265417.7@ADGRF5	ENST00000265417.7	protein_coding	46954734,46906661,46900029,46888335,46884095,46883559,46882049,46881455,46879818,46878202,46871843,46868883,46866925,46865042,46862888,46860715,46858129,46856867,46856718,46855974,46852599	46954943,46906786,46900083,46888505,46884271,46883665,46882107,46881597,46880039,46878405,46872013,46869092,46867137,46865197,46863096,46860894,46859523,46856908,46856777,46856058,46854071	Gene ID= ENSG00000069122.18 TPM= 130.53 Transcript Type= protein_coding
chr6	46852512	46921977	46852512	46921977	-	ENST00000283296.11@ADGRF5	ENST00000283296.11	protein_coding	46921713,46906661,46900029,46888335,46884095,46883559,46882049,46881455,46879818,46878202,46871843,46868883,46866925,46865042,46862888,46860715,46858129,46856867,46856718,46855974,46852512	46921977,46906786,46900083,46888505,46884271,46883665,46882107,46881597,46880039,46878405,46872013,46869092,46867137,46865197,46863096,46860894,46859523,46856908,46856777,46856058,46854071	Gene ID= ENSG00000069122.18 TPM= 53.46 Transcript Type= protein_coding
chr6	47231532	47309905	47231532	47309905	-	ENST00000296861.2@TNFRSF21	ENST00000296861.2	protein_coding	47309416,47285944,47283938,47253256,47234670,47231532	47309905,47286595,47284432,47253521,47234898,47232994	Gene ID= ENSG00000146072.6 TPM= 89.9 Transcript Type= protein_coding
chr6	47477789	47627263	47477789	47627263	+	ENST00000359314.5@CD2AP	ENST00000359314.5	protein_coding	47477789,47503280,47533602,47544606,47554646,47574064,47576524,47577009,47579385,47580864,47582003,47595861,47599301,47606165,47607927,47609123,47612473,47624186	47478248,47503440,47533755,47544706,47554766,47574251,47576602,47577103,47579489,47580900,47582065,47596026,47599443,47606277,47608028,47609304,47612536,47627263	Gene ID= ENSG00000198087.7 TPM= 7.01 Transcript Type= protein_coding
chr6	49431281	49463304	49431281	49463304	-	transcript3608.chr6.nnic@MUT	transcript3608.chr6.nnic	protein_coding	49463103,49460071,49459082,49457691,49456080,49453585,49451466,49448816,49447670,49444639,49441840,49440206,49435456,49431281	49463304,49460210,49459505,49458058,49456237,49453756,49451714,49448927,49447785,49444754,49441971,49440353,49435623,49431856	Gene ID= ENSG00000146085.7 TPM= 2.34 Transcript Type= NA
chr6	49431281	49463216	49431281	49463216	-	transcript3613.chr6.nnic@MUT	transcript3613.chr6.nnic	protein_coding	49463168,49459082,49457691,49456080,49453585,49451466,49448816,49447670,49444639,49441840,49440206,49435456,49431281	49463216,49459505,49458058,49456237,49453756,49451714,49448927,49447785,49444754,49441971,49440353,49435623,49431856	Gene ID= ENSG00000146085.7 TPM= 4.67 Transcript Type= NA
chr6	49430360	49463191	49430360	49463191	-	ENST00000274813.3@MUT	ENST00000274813.3	protein_coding	49463103,49459082,49457691,49456080,49453585,49451466,49448816,49447670,49444639,49441840,49440206,49435456,49430360	49463191,49459505,49458058,49456237,49453756,49451714,49448927,49447785,49444754,49441971,49440353,49435623,49431856	Gene ID= ENSG00000146085.7 TPM= 7.01 Transcript Type= protein_coding
chr6	49463378	49493107	49463378	49493107	+	ENST00000335783.3@CENPQ	ENST00000335783.3	protein_coding	49463378,49470159,49470974,49472063,49472790,49480951,49488352,49488607,49492144	49463453,49470278,49471028,49472183,49472858,49481080,49488471,49488684,49493107	Gene ID= ENSG00000031691.6 TPM= 2.34 Transcript Type= protein_coding
chr6	52264016	52284792	52264016	52284792	-	transcript3632.chr6.nic@MCM3	transcript3632.chr6.nic	protein_coding	52284597,52283294,52282653,52282045,52279361,52278742,52277535,52277067,52276268,52273742,52273230,52272301,52269086,52267865,52266611,52266075,52265235,52264016	52284792,52283406,52282861,52282175,52279599,52278850,52277688,52277198,52276476,52273916,52273356,52272451,52269226,52267968,52266696,52266144,52265385,52264786	Gene ID= ENSG00000112118.18 TPM= 16.35 Transcript Type= NA
chr6	52362128	52407777	52362128	52407777	+	ENST00000442253.2@PAQR8	ENST00000442253.2	protein_coding	52362128,52403162	52362249,52407777	Gene ID= ENSG00000170915.8 TPM= 8.17 Transcript Type= protein_coding
chr6	52420278	52492420	52420278	52492420	+	transcript3644.chr6.nic@EFHC1	transcript3644.chr6.nic	protein_coding	52420278,52423946,52429969,52430228,52438304,52452688,52464895,52469333,52479037,52479640,52490140,52492270	52420473,52424167,52430131,52430374,52438591,52454287,52465115,52469473,52479250,52479787,52490350,52492420	Gene ID= ENSG00000096093.15 TPM= 2.34 Transcript Type= NA
chr6	52420196	52497190	52420196	52497190	+	ENST00000371068.10@EFHC1	ENST00000371068.10	protein_coding	52420196,52423946,52438304,52452688,52454095,52464895,52469333,52479037,52479640,52490140,52492270	52420473,52424167,52438591,52452837,52454287,52465115,52469473,52479250,52479787,52490350,52497190	Gene ID= ENSG00000096093.15 TPM= 1.17 Transcript Type= protein_coding
chr6	52420220	52492420	52420220	52492420	+	transcript3649.chr6.nnic@EFHC1	transcript3649.chr6.nnic	protein_coding	52420220,52423946,52438304,52452688,52464895,52469333,52479037,52479640,52488557,52490140,52492270	52420473,52424167,52438591,52454287,52465115,52469473,52479250,52479787,52488675,52490350,52492420	Gene ID= ENSG00000096093.15 TPM= 2.34 Transcript Type= NA
chr6	52419743	52492497	52419743	52492497	+	ENST00000637340.1@EFHC1	ENST00000637340.1	protein_coding	52419743,52423946,52438304,52452688,52464895,52469333,52479037,52479640,52490140,52492270	52420473,52424167,52438591,52454287,52465115,52469473,52479250,52479787,52490350,52492497	Gene ID= ENSG00000096093.15 TPM= 2.34 Transcript Type= retained_intron
chr6	52500519	52577073	52500519	52577073	-	transcript3661.chr6.nic@TRAM2	transcript3661.chr6.nic	protein_coding	52576796,52535783,52516628,52516006,52509528,52508234,52505599,52504591,52500519	52577073,52535846,52516737,52516122,52509586,52508318,52507623,52504754,52503270	Gene ID= ENSG00000065308.4 TPM= 28.02 Transcript Type= NA
chr6	52664385	52669155	52664385	52669155	+	transcript3668.chr6.nnic@AL109918.1	transcript3668.chr6.nnic	transcribed_unprocessed_pseudogene	52664385,52666389,52666749	52665419,52666518,52669155	Gene ID= ENSG00000216775.2 TPM= 8.17 Transcript Type= NA
chr6	52671109	52686588	52671109	52686588	+	ENST00000211314.4@TMEM14A	ENST00000211314.4	protein_coding	52671109,52677087,52681813,52684078,52686010	52671245,52677172,52681914,52684165,52686588	Gene ID= ENSG00000096092.5 TPM= 29.19 Transcript Type= protein_coding
chr6	52791664	52803910	52791664	52803910	-	ENST00000334575.5@GSTA1	ENST00000334575.5	protein_coding	52803785,52799181,52797586,52796182,52794125,52792856,52791664	52803910,52799297,52797637,52796314,52794266,52792987,52791980	Gene ID= ENSG00000243955.5 TPM= 1.17 Transcript Type= protein_coding
chr6	52977953	52995378	52977953	52995378	-	ENST00000370963.8@GSTA4	ENST00000370963.8	protein_coding	52995249,52994157,52987357,52985451,52984464,52982574,52977953	52995378,52994261,52987408,52985583,52984605,52982705,52978592	Gene ID= ENSG00000170899.10 TPM= 91.46 Transcript Type= protein_coding
chr6	52977953	52995362	52977953	52995362	-	transcript3686.chr6.nic@GSTA4	transcript3686.chr6.nic	protein_coding	52995249,52994157,52987357,52984464,52982574,52977953	52995362,52994261,52987408,52985583,52982705,52978592	Gene ID= ENSG00000170899.10 TPM= 12.84 Transcript Type= NA
chr6	52982538	52995362	52982538	52995362	-	transcript3689.chr6.nic@GSTA4	transcript3689.chr6.nic	protein_coding	52995249,52994157,52987357,52982538	52995362,52994261,52987408,52985583	Gene ID= ENSG00000170899.10 TPM= 12.84 Transcript Type= NA
chr6	53001279	53061770	53001279	53061770	-	ENST00000350082.9@ICK	ENST00000350082.9	protein_coding	53061596,53041136,53037939,53032533,53031065,53019227,53018330,53016083,53013662,53012037,53011769,53009439,53006315,53001279	53061770,53041408,53037993,53032654,53031144,53019359,53018501,53016250,53013982,53012227,53011917,53009567,53006437,53005303	Gene ID= ENSG00000112144.15 TPM= 14.01 Transcript Type= protein_coding
chr6	53065390	53098373	53065390	53098373	+	transcript3704.chr6.nnic@FBXO9	transcript3704.chr6.nnic	protein_coding	53065390,53071057,53073481,53076486,53078799,53080968,53082504,53092429,53092734,53093885,53095513,53097722	53065792,53071143,53073643,53076543,53078898,53081098,53082618,53092547,53093561,53093978,53095664,53098373	Gene ID= ENSG00000112146.16 TPM= 12.84 Transcript Type= NA
chr6	53065390	53093972	53065390	53093972	+	transcript3705.chr6.nnic@FBXO9	transcript3705.chr6.nnic	protein_coding	53065390,53071057,53073481,53076486,53078799,53080968,53082504,53092429,53092734,53093466,53093885	53065792,53071143,53073643,53076543,53078898,53081098,53082618,53092547,53092824,53093561,53093972	Gene ID= ENSG00000112146.16 TPM= 4.09 Transcript Type= NA
chr6	53267398	53349179	53267398	53349179	-	ENST00000542638.5@ELOVL5	ENST00000542638.5	protein_coding	53348817,53295642,53291776,53276179,53275090,53270593,53267398	53349179,53295707,53291963,53276256,53275261,53270727,53269270	Gene ID= ENSG00000012660.13 TPM= 12.84 Transcript Type= protein_coding
chr6	53267399	53349007	53267399	53349007	-	ENST00000304434.10@ELOVL5	ENST00000304434.10	protein_coding	53348817,53295642,53291776,53276179,53275090,53273220,53270593,53267399	53349007,53295707,53291963,53276256,53275261,53273344,53270727,53269270	Gene ID= ENSG00000012660.13 TPM= 152.95 Transcript Type= protein_coding
chr6	53497341	53545129	53497341	53545129	-	ENST00000229416.10@GCLC	ENST00000229416.10	protein_coding	53544496,53522415,53520778,53516109,53514439,53514204,53509176,53508595,53507480,53506913,53505803,53505392,53500432,53500247,53500045,53497341	53545129,53522527,53520960,53516222,53514497,53514337,53509250,53508711,53507618,53507025,53505895,53505496,53500513,53500350,53500165,53498967	Gene ID= ENSG00000001084.10 TPM= 18.68 Transcript Type= protein_coding
chr6	53794980	53924121	53794980	53924121	+	ENST00000370888.5@LRRC1	ENST00000370888.5	protein_coding	53794980,53842110,53878993,53882887,53896498,53896829,53897285,53899747,53902629,53904379,53913854,53919498,53920625,53922635	53795415,53842227,53879071,53882976,53896554,53896892,53897359,53899891,53902747,53904462,53913969,53919670,53920761,53924121	Gene ID= ENSG00000137269.14 TPM= 18.68 Transcript Type= protein_coding
chr6	55434369	55579214	55434369	55579214	-	ENST00000274901.8@HMGCLL1	ENST00000274901.8	protein_coding	55578948,55542060,55541729,55516508,55514048,55499236,55495419,55439434,55434369	55579214,55542140,55541836,55516603,55514196,55499299,55495607,55439559,55435763	Gene ID= ENSG00000146151.12 TPM= 2.34 Transcript Type= protein_coding
chr6	55753645	55875564	55753645	55875564	-	ENST00000370830.3@BMP5	ENST00000370830.3	protein_coding	55874376,55819655,55794279,55774049,55760457,55759005,55753645	55875564,55819847,55794427,55774243,55760533,55759115,55755682	Gene ID= ENSG00000112175.7 TPM= 2.34 Transcript Type= protein_coding
chr6	56056590	56247746	56056590	56247746	-	ENST00000244728.9@COL21A1	ENST00000244728.9	protein_coding	56247387,56182531,56179578,56170960,56170649,56168124,56166906,56164814,56164423,56156887,56141930,56141785,56126096,56125567,56124239,56124062,56101472,56077529,56075479,56074232,56070745,56069046,56067295,56064578,56061649,56060891,56060741,56060018,56059165,56056590	56247746,56182656,56180129,56171128,56170865,56168297,56166983,56164822,56164506,56156949,56141983,56141838,56126149,56125620,56124292,56124115,56101525,56077573,56075532,56074285,56070798,56069117,56067330,56064622,56061681,56061037,56060795,56060218,56059242,56057844	Gene ID= ENSG00000124749.16 TPM= 42.03 Transcript Type= protein_coding
chr6	56090410	56247601	56090410	56247601	-	transcript3755.chr6.nnic@COL21A1	transcript3755.chr6.nnic	protein_coding	56247387,56182531,56179578,56170960,56170649,56168124,56166906,56164814,56164423,56156887,56141930,56141785,56126096,56125563,56124239,56124062,56101472,56091497,56090410	56247601,56182656,56180129,56171128,56170865,56168297,56166983,56164822,56164506,56156949,56141983,56141838,56126149,56125620,56124292,56124115,56101525,56091583,56090913	Gene ID= ENSG00000124749.16 TPM= 2.34 Transcript Type= NA
chr6	56517567	56542913	56517567	56542913	-	transcript3758.chr6.nnic@DST	transcript3758.chr6.nnic	protein_coding	56540280,56536779,56535122,56532344,56529974,56529448,56528841,56527493,56526361,56517567	56542913,56536942,56535294,56532510,56530133,56529774,56528925,56527734,56526567,56517620	Gene ID= ENSG00000151914.19 TPM= 456.53 Transcript Type= NA
chr6	56614576	56642896	56614576	56642896	-	ENST00000370765.10@DST	ENST00000370765.10	protein_coding	56642622,56642410,56641947,56640143,56639929,56639696,56639450,56639259,56636557,56635589,56634801,56634462,56634132,56632854,56631883,56631211,56630245,56629250,56627999,56627204,56625157,56624530,56617986,56614576	56642896,56642503,56642101,56640605,56640057,56639773,56639611,56639363,56636652,56635714,56634953,56634616,56634258,56633037,56632040,56631389,56630383,56629443,56628161,56627287,56625264,56624628,56620715,56617418	Gene ID= ENSG00000151914.19 TPM= 1.17 Transcript Type= protein_coding
chr6	57046549	57055225	57046549	57055225	+	ENST00000370733.4@KIAA1586	ENST00000370733.4	protein_coding	57046549,57047313,57050774,57052686	57046776,57047396,57050854,57055225	Gene ID= ENSG00000168116.13 TPM= 11.09 Transcript Type= protein_coding
chr6	57046532	57055239	57046532	57055239	+	ENST00000545356.5@KIAA1586	ENST00000545356.5	protein_coding	57046532,57047313,57052686	57046776,57047396,57055239	Gene ID= ENSG00000168116.13 TPM= 1.75 Transcript Type= protein_coding
chr6	57090010	57170307	57090010	57170307	+	ENST00000370706.8@ZNF451	ENST00000370706.8	protein_coding	57090010,57090811,57099061,57124734,57128729,57133042,57134744,57141302,57141948,57147090,57150719,57152221,57153861,57161084,57168423	57090274,57090894,57099141,57124859,57128840,57133192,57134870,57141455,57142095,57148693,57150862,57152351,57154047,57161152,57170307	Gene ID= ENSG00000112200.16 TPM= 11.68 Transcript Type= protein_coding
chr6	57186992	57222305	57186992	57222305	-	transcript3804.chr6.nnic@RAB23	transcript3804.chr6.nnic	protein_coding	57222195,57210226,57207628,57196450,57194770,57193842,57186992	57222305,57210445,57207713,57196606,57194852,57193934,57190600	Gene ID= ENSG00000112210.11 TPM= 2.34 Transcript Type= NA
chr6	57188783	57222305	57188783	57222305	-	transcript3806.chr6.nnic@RAB23	transcript3806.chr6.nnic	protein_coding	57222023,57210226,57207628,57196450,57194770,57193842,57188783	57222305,57210445,57207713,57196606,57194852,57193934,57190600	Gene ID= ENSG00000112210.11 TPM= 4.09 Transcript Type= NA
chr6	57188783	57222282	57188783	57222282	-	transcript3808.chr6.nnic@RAB23	transcript3808.chr6.nnic	protein_coding	57221726,57196450,57194770,57193842,57188783	57222282,57196606,57194852,57193934,57190600	Gene ID= ENSG00000112210.11 TPM= 4.09 Transcript Type= NA
chr6	57186992	57222314	57186992	57222314	-	ENST00000468148.5@RAB23	ENST00000468148.5	protein_coding	57221726,57210226,57207628,57196450,57194770,57193842,57186992	57222314,57210445,57207713,57196606,57194852,57193934,57190600	Gene ID= ENSG00000112210.11 TPM= 12.84 Transcript Type= protein_coding
chr6	57317624	57646849	57317624	57646849	+	ENST00000615550.4@PRIM2	ENST00000615550.4	protein_coding	57317624,57318437,57320457,57324201,57325925,57379901,57382031,57507387,57532411,57537440,57601093,57606375,57632133,57645928	57317701,57318599,57320560,57324280,57326045,57379996,57382168,57507454,57532483,57537625,57601219,57606457,57632201,57646849	Gene ID= ENSG00000146143.17 TPM= 3.5 Transcript Type= protein_coding
chr6	57908560	57913911	57908560	57913911	-	ENST00000606125.1@AL021368.2	ENST00000606125.1	lincRNA	57908560	57913911	Gene ID= ENSG00000272316.1 TPM= 1.17 Transcript Type= lincRNA
chr6	57945832	57961421	57945832	57961421	-	transcript3820.chr6.nnic@LINC00680	transcript3820.chr6.nnic	transcribed_unprocessed_pseudogene	57961321,57961152,57959028,57949358,57948873,57945832	57961421,57961224,57959111,57950011,57949068,57947177	Gene ID= ENSG00000215190.9 TPM= 2.34 Transcript Type= NA
chr6	57946078	57961380	57946078	57961380	-	ENST00000418368.1@LINC00680	ENST00000418368.1	transcribed_unprocessed_pseudogene	57961321,57961152,57959028,57949859,57948873,57946078	57961380,57961224,57959111,57950011,57949068,57947177	Gene ID= ENSG00000215190.9 TPM= 3.5 Transcript Type= processed_transcript
chr6	61679960	62286227	61679960	62286227	-	ENST00000281156.4@KHDRBS2	ENST00000281156.4	protein_coding	62285858,62177185,62047878,61978066,61901244,61894635,61732682,61697195,61679960	62286227,62177312,62047994,61978212,61901371,61894833,61732764,61697253,61681060	Gene ID= ENSG00000112232.8 TPM= 2.34 Transcript Type= protein_coding
chr6	61749010	62286214	61749010	62286214	-	transcript3840.chr6.nnic@KHDRBS2	transcript3840.chr6.nnic	protein_coding	62285858,62177185,62047878,61978066,61901244,61894635,61816955,61749010	62286214,62177312,62047994,61978212,61901371,61894833,61817005,61749683	Gene ID= ENSG00000112232.8 TPM= 3.5 Transcript Type= NA
chr6	61783122	62286214	61783122	62286214	-	transcript3843.chr6.nnic@KHDRBS2	transcript3843.chr6.nnic	protein_coding	62285858,62177185,62047878,61978066,61901244,61894635,61783122	62286214,62177312,62047994,61978212,61901371,61894833,61785147	Gene ID= ENSG00000112232.8 TPM= 2.34 Transcript Type= NA
chr6	61827006	62286214	61827006	62286214	-	transcript3846.chr6.nnic@KHDRBS2	transcript3846.chr6.nnic	protein_coding	62285858,62177185,62047878,61978066,61901244,61894635,61827006	62286214,62177312,62047994,61978212,61901371,61894833,61827428	Gene ID= ENSG00000112232.8 TPM= 3.5 Transcript Type= NA
chr6	62057736	62286214	62057736	62286214	-	transcript3849.chr6.nnic@KHDRBS2	transcript3849.chr6.nnic	protein_coding	62285858,62177185,62081035,62057736	62286214,62177312,62081121,62058352	Gene ID= ENSG00000112232.8 TPM= 2.34 Transcript Type= NA
chr6	63572012	63583587	63572012	63583587	+	ENST00000370651.5@PTP4A1	ENST00000370651.5	protein_coding	63572012,63576436,63578437,63578898,63579257,63580057	63572719,63576985,63578529,63579028,63579331,63583587	Gene ID= ENSG00000112245.10 TPM= 199.66 Transcript Type= protein_coding
chr6	63635785	63714454	63635785	63714454	+	transcript3875.chr6.nic@PHF3	transcript3875.chr6.nic	protein_coding	63635785,63680000,63684129,63691737,63694581,63698223,63698449,63700350,63702508,63703536,63706029,63706729,63709151,63711167,63711586	63636150,63680161,63685911,63692043,63694764,63698367,63698605,63700466,63702639,63703671,63706224,63706876,63709240,63711362,63714454	Gene ID= ENSG00000118482.11 TPM= 9.34 Transcript Type= NA
chr6	68632663	68635027	68632663	68635027	-	ENST00000604392.1@AL391807.1	ENST00000604392.1	antisense_RNA	68632663	68635027	Gene ID= ENSG00000230910.2 TPM= 3.5 Transcript Type= antisense_RNA
chr6	68635367	69389511	68635367	69389511	+	ENST00000370598.5@ADGRB3	ENST00000370598.5	protein_coding	68635367,68637391,68638661,68930559,68936519,68943830,68956024,68956645,68974763,68975234,68993768,69014038,69018391,69048185,69049271,69062934,69075995,69233290,69235032,69239124,69324872,69327820,69330506,69332923,69338916,69339333,69354233,69355821,69360869,69372406,69382831,69388703	68636000,68637562,68639432,68930669,68936680,68943994,68956188,68956809,68974864,68975340,68993962,69014106,69018499,69048334,69049346,69063036,69076038,69233416,69235135,69239226,69325022,69327889,69330572,69333008,69339014,69339504,69354328,69355860,69361512,69372441,69382935,69389511	Gene ID= ENSG00000135298.13 TPM= 1.17 Transcript Type= protein_coding
chr6	69675802	69797111	69675802	69797111	-	ENST00000370577.7@LMBRD1	ENST00000370577.7	protein_coding	69796813,69790296,69780494,69752259,69749341,69741789,69737942,69718956,69713645,69701889,69701443,69700765,69699043,69697563,69676450,69675802	69797111,69790472,69780554,69752356,69749408,69741877,69738015,69719081,69713797,69701953,69701545,69700869,69699192,69697641,69676541,69676271	Gene ID= ENSG00000168216.10 TPM= 71.22 Transcript Type= protein_coding
chr6	69772200	69777458	69772200	69777458	+	transcript3885.chr6.nnic@NA	transcript3885.chr6.nnic	NA	69772200	69777458	Gene ID= novel_gene_chr6_3886 TPM= 9.34 Transcript Type= NA
chr6	70413518	70561171	70413518	70561171	+	transcript3889.chr6.nic@FAM135A	transcript3889.chr6.nic	protein_coding	70413518,70415291,70426439,70428304,70452492,70475410,70475663,70477159,70480901,70482001,70486167,70491034,70502636,70522513,70523967,70524931,70528292,70533160,70533757,70536260,70538291,70556750,70559716	70413702,70415376,70426532,70428419,70452571,70475549,70475733,70477332,70481027,70482154,70486244,70491083,70502791,70522586,70524121,70526698,70528452,70533251,70533854,70536411,70538401,70556863,70561171	Gene ID= ENSG00000082269.16 TPM= 2.34 Transcript Type= NA
chr6	70566911	70589569	70566911	70589569	+	transcript3899.chr6.nnic@SDHAF4	transcript3899.chr6.nnic	protein_coding	70566911,70579414,70588615,70589377	70567004,70579566,70588880,70589569	Gene ID= ENSG00000154079.5 TPM= 2.34 Transcript Type= NA
chr6	70566917	70589569	70566917	70589569	+	ENST00000370474.3@SDHAF4	ENST00000370474.3	protein_coding	70566917,70579414,70588615	70567004,70579566,70589569	Gene ID= ENSG00000154079.5 TPM= 2.34 Transcript Type= protein_coding
chr6	70667776	70862015	70667776	70862015	+	ENST00000370455.7@SMAP1	ENST00000370455.7	protein_coding	70667776,70732378,70754980,70773350,70791689,70798657,70836941,70852540,70856859,70857922,70860200	70668141,70732511,70755065,70773425,70791769,70798737,70837028,70852664,70857030,70858229,70862015	Gene ID= ENSG00000112305.14 TPM= 4.67 Transcript Type= protein_coding
chr6	70667776	70861166	70667776	70861166	+	ENST00000316999.9@SMAP1	ENST00000316999.9	protein_coding	70667776,70732378,70754980,70773350,70798657,70836941,70852540,70856859,70857922,70860200	70668141,70732511,70755065,70773425,70798737,70837028,70852664,70857030,70858229,70861166	Gene ID= ENSG00000112305.14 TPM= 16.35 Transcript Type= protein_coding
chr6	71288811	71305639	71288811	71305639	+	transcript3916.chr6.nnic@OGFRL1	transcript3916.chr6.nnic	protein_coding	71288811,71291871,71293293,71293533,71296317,71296495,71296672,71301386	71289170,71292020,71293379,71293611,71296395,71296561,71296817,71305639	Gene ID= ENSG00000119900.7 TPM= 3.5 Transcript Type= NA
chr6	71288461	71302270	71288461	71302270	+	transcript3918.chr6.nnic@OGFRL1	transcript3918.chr6.nnic	protein_coding	71288461,71293293,71293533,71296317,71296495,71296672,71301386	71288586,71293379,71293611,71296395,71296561,71296817,71302270	Gene ID= ENSG00000119900.7 TPM= 2.34 Transcript Type= NA
chr6	71288771	71302270	71288771	71302270	+	transcript3933.chr6.nnic@OGFRL1	transcript3933.chr6.nnic	protein_coding	71288771,71293293,71293533,71296672,71301386	71289170,71293379,71293611,71296817,71302270	Gene ID= ENSG00000119900.7 TPM= 2.34 Transcript Type= NA
chr6	71288803	71308950	71288803	71308950	+	ENST00000370435.4@OGFRL1	ENST00000370435.4	protein_coding	71288803,71293293,71293533,71296317,71296495,71296672,71301386	71289170,71293379,71293611,71296395,71296561,71296817,71308950	Gene ID= ENSG00000119900.7 TPM= 5.84 Transcript Type= protein_coding
chr6	71303114	71420199	71303114	71420199	-	transcript3930.chr6.nic@AL136164.2	transcript3930.chr6.nic	lincRNA	71420066,71417320,71416410,71310550,71310296,71303114	71420199,71417443,71416559,71310642,71310373,71304390	Gene ID= ENSG00000269966.1 TPM= 2.34 Transcript Type= NA
chr6	71415536	71420828	71415536	71420828	-	transcript3940.chr6.nic@AL136164.2	transcript3940.chr6.nic	lincRNA	71417320,71415536	71420828,71416559	Gene ID= ENSG00000269966.1 TPM= 2.34 Transcript Type= NA
chr6	71386852	71390829	71386852	71390829	-	ENST00000624429.1@AL136164.3	ENST00000624429.1	TEC	71386852	71390829	Gene ID= ENSG00000279289.1 TPM= 16.35 Transcript Type= TEC
chr6	71409193	71413602	71409193	71413602	+	transcript3941.chr6.nnic@NA	transcript3941.chr6.nnic	NA	71409193	71413602	Gene ID= novel_gene_chr6_3942 TPM= 3.5 Transcript Type= NA
chr6	73274139	73310143	73274139	73310143	-	ENST00000484801.5@KHDC1	ENST00000484801.5	protein_coding	73309552,73291998,73274139	73310143,73292040,73275556	Gene ID= ENSG00000135314.12 TPM= 1.17 Transcript Type= processed_transcript
chr6	73394748	73417569	73394748	73417569	+	ENST00000370336.4@DDX43	ENST00000370336.4	protein_coding	73394748,73397689,73400234,73401859,73404690,73405679,73406364,73407505,73407960,73409248,73412205,73413658,73413970,73414548,73415497,73416113,73417187	73395155,73397744,73400363,73401990,73404771,73405835,73406482,73407615,73408101,73409348,73412292,73413785,73414079,73414686,73415584,73416251,73417569	Gene ID= ENSG00000080007.7 TPM= 1.17 Transcript Type= protein_coding
chr6	73423709	73452276	73423709	73452276	-	ENST00000370315.3@MB21D1	ENST00000370315.3	protein_coding	73451525,73445528,73440209,73428709,73423709	73452276,73445747,73440445,73428811,73425578	Gene ID= ENSG00000164430.15 TPM= 5.84 Transcript Type= protein_coding
chr6	73461578	73509236	73461578	73509236	+	ENST00000498286.5@MTO1	ENST00000498286.5	protein_coding	73461578,73466209,73466489,73473365,73479732,73479936,73480675,73482040,73482449,73492234,73497736,73500574	73462071,73466408,73466606,73473654,73479844,73480126,73480805,73482244,73482620,73492352,73497896,73509236	Gene ID= ENSG00000135297.15 TPM= 11.68 Transcript Type= protein_coding
chr6	73461737	73501050	73461737	73501050	+	transcript3967.chr6.nic@MTO1	transcript3967.chr6.nic	protein_coding	73461737,73466209,73466489,73473365,73479732,73479936,73480675,73482029,73482449,73492234,73497736,73500574	73462071,73466408,73466606,73473654,73479844,73480367,73480805,73482244,73482620,73492352,73497896,73501050	Gene ID= ENSG00000135297.15 TPM= 2.34 Transcript Type= NA
chr6	73494777	73496631	73494777	73496631	-	transcript3971.chr6.nnic@NA	transcript3971.chr6.nnic	NA	73494777	73496631	Gene ID= novel_gene_chr6_3972 TPM= 3.5 Transcript Type= NA
chr6	73517515	73521588	73517515	73521588	-	ENST00000309268.10@EEF1A1	ENST00000309268.10	protein_coding	73521000,73519883,73519337,73518932,73518698,73518354,73518030,73517515	73521588,73520056,73519516,73519228,73518848,73518610,73518264,73517934	Gene ID= ENSG00000156508.17 TPM= 3562.95 Transcript Type= protein_coding
chr6	73515752	73521032	73515752	73521032	-	ENST00000615060.4@EEF1A1	ENST00000615060.4	protein_coding	73521000,73519883,73519337,73518932,73518698,73518591,73518568,73518354,73518026,73515752	73521032,73520056,73519516,73519228,73518848,73518610,73518588,73518563,73518264,73517934	Gene ID= ENSG00000156508.17 TPM= 28.15 Transcript Type= protein_coding
chr6	73593379	73654155	73593379	73654155	-	ENST00000355773.5@SLC17A5	ENST00000355773.5	protein_coding	73653793,73644407,73641691,73638412,73636621,73635382,73621804,73615315,73610400,73600351,73593379	73654155,73644603,73641924,73638499,73636707,73635500,73621962,73615447,73610547,73600441,73595214	Gene ID= ENSG00000119899.12 TPM= 50.21 Transcript Type= protein_coding
chr6	73593379	73654014	73593379	73654014	-	transcript4043.chr6.nnic@SLC17A5	transcript4043.chr6.nnic	protein_coding	73653793,73644407,73641691,73636621,73635382,73621804,73615315,73610400,73600351,73593379	73654014,73644603,73641924,73636707,73635500,73621962,73615447,73610547,73600441,73595214	Gene ID= ENSG00000119899.12 TPM= 4.67 Transcript Type= NA
chr6	75084326	75206051	75084326	75206051	-	ENST00000322507.12@COL12A1	ENST00000322507.12	protein_coding	75205777,75202720,75194831,75192212,75191701,75189552,75189217,75188362,75183854,75183050,75180939,75177663,75175038,75165507,75156257,75155662,75154416,75152333,75152131,75151867,75151141,75148358,75147675,75146102,75145326,75143252,75142032,75138822,75138448,75138320,75137437,75134726,75133858,75133293,75131940,75130852,75130091,75128296,75126351,75125127,75124255,75123948,75123330,75121302,75119350,75119043,75117382,75116019,75115784,75113602,75113204,75109018,75106419,75105206,75103757,75102597,75101999,75101600,75097253,75095108,75091490,75091323,75090110,75089106,75087577,75084326	75206051,75202827,75194947,75192355,75191760,75189815,75189381,75188535,75184144,75183652,75181211,75177935,75175310,75165779,75156523,75155854,75154537,75152482,75152250,75152031,75151287,75148497,75147804,75146244,75145455,75143388,75142161,75138961,75138580,75138340,75137579,75134855,75133997,75133422,75132082,75130981,75130233,75128425,75126470,75125273,75124371,75124094,75123404,75121441,75119473,75119186,75117546,75116057,75115922,75113744,75113313,75109167,75106496,75105292,75103810,75102692,75102052,75101653,75097306,75095179,75091525,75091389,75090298,75089174,75087747,75086557	Gene ID= ENSG00000111799.20 TPM= 26.85 Transcript Type= protein_coding
chr6	75237787	75243795	75237787	75243795	-	ENST00000509698.5@COX7A2	ENST00000509698.5	protein_coding	75243717,75241176,75240277,75237787	75243795,75241265,75240385,75237988	Gene ID= ENSG00000112695.11 TPM= 84.07 Transcript Type= protein_coding
chr6	75252924	75284968	75252924	75284968	-	ENST00000230461.10@TMEM30A	ENST00000230461.10	protein_coding	75284402,75267641,75265231,75260824,75259347,75258780,75252924	75284968,75267748,75265338,75260911,75259490,75258986,75256295	Gene ID= ENSG00000112697.15 TPM= 198.49 Transcript Type= protein_coding
chr6	75254599	75284948	75254599	75284948	-	ENST00000475111.6@TMEM30A	ENST00000475111.6	protein_coding	75284402,75265231,75260824,75259347,75258780,75254599	75284948,75265338,75260911,75259490,75258986,75256295	Gene ID= ENSG00000112697.15 TPM= 1.17 Transcript Type= protein_coding
chr6	75314277	75493935	75314277	75493935	-	transcript4071.chr6.nic@FILIP1	transcript4071.chr6.nic	protein_coding	75493414,75414697,75362744,75353539,75314277	75493935,75414978,75362917,75353717,75315202	Gene ID= ENSG00000118407.14 TPM= 4.67 Transcript Type= NA
chr6	75477287	75479893	75477287	75479893	+	transcript4072.chr6.nnic@NA	transcript4072.chr6.nnic	NA	75477287	75479893	Gene ID= novel_gene_chr6_4073 TPM= 5.84 Transcript Type= NA
chr6	75601867	75715904	75601867	75715904	+	transcript4074.chr6.nic@SENP6	transcript4074.chr6.nic	protein_coding	75601867,75621532,75622751,75623900,75633581,75634707,75640684,75647731,75659262,75663221,75666712,75670553,75675435,75675860,75677030,75678583,75678811,75695804,75697425,75702645,75709527,75711328,75713513,75713675,75715385	75602576,75621625,75622858,75623960,75633726,75634811,75640704,75647801,75659407,75663518,75666941,75670720,75675468,75676054,75677256,75678692,75678927,75695923,75697517,75703072,75709630,75711416,75713581,75713825,75715904	Gene ID= ENSG00000112701.17 TPM= 10.51 Transcript Type= NA
chr6	75601509	75715904	75601509	75715904	+	ENST00000370010.6@SENP6	ENST00000370010.6	protein_coding	75601509,75621532,75623900,75633581,75634707,75647731,75659262,75663221,75666712,75670553,75675435,75675860,75677030,75678583,75678811,75695804,75697425,75702645,75709527,75711328,75713513,75713675,75715385	75602576,75621625,75623960,75633726,75634811,75647801,75659407,75663518,75666941,75670720,75675468,75676054,75677256,75678692,75678927,75695923,75697517,75703072,75709630,75711416,75713581,75713825,75715904	Gene ID= ENSG00000112701.17 TPM= 12.84 Transcript Type= protein_coding
chr6	75636877	75638381	75636877	75638381	-	transcript4112.chr6.nnic@NA	transcript4112.chr6.nnic	NA	75636877	75638381	Gene ID= novel_gene_chr6_4113 TPM= 11.68 Transcript Type= NA
chr6	75638244	75643546	75638244	75643546	-	transcript4114.chr6.nnic@NA	transcript4114.chr6.nnic	NA	75638244	75643546	Gene ID= novel_gene_chr6_4115 TPM= 3.5 Transcript Type= NA
chr6	75749211	75916231	75749211	75916231	+	transcript4120.chr6.nic@MYO6	transcript4120.chr6.nic	protein_coding	75749211,75817501,75822782,75828540,75830416,75832842,75835901,75840585,75841214,75844897,75848351,75855139,75857097,75858902,75861023,75862596,75866526,75866932,75870647,75873207,75879820,75880043,75881689,75886004,75886844,75890057,75891228,75892530,75894814,75895231,75907605,75908496,75911672,75914063,75914813	75749423,75817664,75822851,75828613,75830545,75832947,75835956,75840682,75841378,75844977,75848531,75855283,75857254,75858993,75861095,75862723,75866621,75867105,75870685,75873300,75879950,75880120,75881818,75886094,75886994,75890265,75891306,75892690,75894840,75895260,75907708,75908627,75911698,75914281,75916231	Gene ID= ENSG00000196586.13 TPM= 4.67 Transcript Type= NA
chr6	75749192	75919537	75749192	75919537	+	ENST00000369981.7@MYO6	ENST00000369981.7	protein_coding	75749192,75817501,75822782,75828540,75830416,75832842,75835901,75840585,75841214,75844897,75848351,75855139,75857097,75858902,75861023,75862596,75866526,75866932,75870647,75873207,75879820,75880043,75881689,75886004,75886844,75890057,75891228,75892530,75894814,75895231,75898373,75907605,75908496,75911672,75914063,75914813	75749423,75817664,75822851,75828613,75830545,75832947,75835956,75840682,75841378,75844977,75848531,75855283,75857254,75858993,75861095,75862723,75866621,75867105,75870685,75873300,75879950,75880120,75881818,75886094,75886994,75890265,75891306,75892693,75894840,75895260,75898411,75907708,75908627,75911698,75914281,75919537	Gene ID= ENSG00000196586.13 TPM= 4.67 Transcript Type= protein_coding
chr6	75899704	75904345	75899704	75904345	-	transcript4141.chr6.nnic@NA	transcript4141.chr6.nnic	NA	75899704	75904345	Gene ID= novel_gene_chr6_4142 TPM= 5.84 Transcript Type= NA
chr6	78867472	78903102	78867472	78903102	+	ENST00000369940.6@IRAK1BP1	ENST00000369940.6	protein_coding	78867472,78885378,78897829,78898064	78867891,78885443,78897959,78903102	Gene ID= ENSG00000146243.13 TPM= 3.5 Transcript Type= protein_coding
chr6	78982965	79078236	78982965	79078236	-	transcript4148.chr6.nnic@PHIP	transcript4148.chr6.nnic	protein_coding	79078029,79077855,79077700,79077448,79060668,79060478,79042843,79025943,79025519,79019089,79017483,79017346,79016544,79015630,79015082,79004373,79003730,79001899,78998254,78997414,78990868,78988209,78985352,78982965	79078236,79077913,79077729,79077507,79060818,79060576,79043003,79026164,79025619,79019159,79017583,79017386,79016642,79015783,79015216,79004436,79003858,79002124,78998391,78997597,78990985,78988349,78985428,78983117	Gene ID= ENSG00000146247.13 TPM= 8.17 Transcript Type= NA
chr6	78982965	79078294	78982965	79078294	-	transcript4151.chr6.nic@PHIP	transcript4151.chr6.nic	protein_coding	79078029,79077855,79077700,79077448,79060668,79060478,79042843,79025943,79025519,79019089,79017483,79017346,79016544,79015630,79015082,79003730,79001899,78998254,78997414,78990868,78988209,78985352,78982965	79078294,79077913,79077729,79077507,79060818,79060576,79043003,79026164,79025619,79019159,79017583,79017386,79016642,79015783,79015216,79003858,79002124,78998391,78997597,78990985,78988349,78985428,78983117	Gene ID= ENSG00000146247.13 TPM= 54.88 Transcript Type= NA
chr6	78940546	78968018	78940546	78968018	-	transcript4157.chr6.nic@PHIP	transcript4157.chr6.nic	protein_coding	78965945,78965703,78963097,78961690,78958475,78955613,78955232,78954814,78947623,78946711,78946001,78945300,78940546	78968018,78965764,78963252,78961810,78958600,78955682,78955282,78954963,78947775,78946874,78946260,78945497,78941330	Gene ID= ENSG00000146247.13 TPM= 7.01 Transcript Type= NA
chr6	79201249	79234738	79201249	79234738	-	ENST00000620514.1@HMGN3	ENST00000620514.1	protein_coding	79234546,79214972,79208547,79203580,79202276,79202063,79201249	79234738,79215022,79208576,79203630,79202389,79202155,79201726	Gene ID= ENSG00000118418.14 TPM= 1.17 Transcript Type= protein_coding
chr6	79201249	79234717	79201249	79234717	-	transcript4173.chr6.nic@HMGN3	transcript4173.chr6.nic	protein_coding	79234546,79214972,79208547,79203580,79201249	79234717,79215022,79208576,79203630,79202389	Gene ID= ENSG00000118418.14 TPM= 33.86 Transcript Type= NA
chr6	79201248	79234717	79201248	79234717	-	transcript4177.chr6.nic@HMGN3	transcript4177.chr6.nic	protein_coding	79234546,79214972,79208547,79201248	79234717,79215022,79208576,79203630	Gene ID= ENSG00000118418.14 TPM= 8.17 Transcript Type= NA
chr6	79201245	79234689	79201245	79234689	-	ENST00000344726.9@HMGN3	ENST00000344726.9	protein_coding	79234546,79214972,79208547,79203580,79202276,79201245	79234689,79215022,79208576,79203630,79202389,79201726	Gene ID= ENSG00000118418.14 TPM= 24.52 Transcript Type= protein_coding
chr6	79201245	79234689	79201245	79234689	-	ENST00000275036.11@HMGN3	ENST00000275036.11	protein_coding	79234546,79214972,79208547,79203580,79202317,79201245	79234689,79215022,79208576,79203630,79202389,79201726	Gene ID= ENSG00000118418.14 TPM= 39.7 Transcript Type= protein_coding
chr6	79233718	79236797	79233718	79236797	+	ENST00000604516.1@HMGN3-AS1	ENST00000604516.1	antisense_RNA	79233718,79234062	79233927,79236797	Gene ID= ENSG00000270362.1 TPM= 2.34 Transcript Type= antisense_RNA
chr6	79484991	79537408	79484991	79537408	-	ENST00000369846.8@LCA5	ENST00000369846.8	protein_coding	79537165,79518705,79513212,79493613,79492551,79491588,79489084,79484991	79537408,79519085,79513741,79493750,79492647,79491730,79489216,79487866	Gene ID= ENSG00000135338.13 TPM= 2.34 Transcript Type= protein_coding
chr6	79631283	79703659	79631283	79703659	+	ENST00000369838.5@SH3BGRL2	ENST00000369838.5	protein_coding	79631283,79673614,79696485,79699498	79631506,79673799,79696565,79703659	Gene ID= ENSG00000198478.7 TPM= 71.22 Transcript Type= protein_coding
chr6	80106647	80346254	80106647	80346254	+	ENST00000356489.9@BCKDHB	ENST00000356489.9	protein_coding	80106647,80127547,80129161,80167678,80168875,80171282,80200934,80203102,80273135,80343664,80345975	80106889,80127624,80129229,80167811,80169030,80171390,80201031,80203212,80273221,80343812,80346254	Gene ID= ENSG00000083123.14 TPM= 12.84 Transcript Type= protein_coding
chr6	80106647	80346270	80106647	80346270	+	ENST00000320393.8@BCKDHB	ENST00000320393.8	protein_coding	80106647,80127547,80129161,80167678,80168875,80171282,80200934,80203102,80273135,80343664	80106889,80127624,80129229,80167811,80169030,80171390,80201031,80203212,80273221,80346270	Gene ID= ENSG00000083123.14 TPM= 4.67 Transcript Type= protein_coding
chr6	81745730	81752774	81745730	81752774	-	ENST00000369756.3@FAM46A	ENST00000369756.3	protein_coding	81752569,81751590,81745730	81752774,81752178,81750471	Gene ID= ENSG00000112773.15 TPM= 9.34 Transcript Type= protein_coding
chr6	81745730	81752708	81745730	81752708	-	ENST00000369754.7@FAM46A	ENST00000369754.7	protein_coding	81752376,81751590,81745730	81752708,81752178,81750471	Gene ID= ENSG00000112773.15 TPM= 9.34 Transcript Type= protein_coding
chr6	81749618	81752743	81749618	81752743	-	transcript4211.chr6.nic@FAM46A	transcript4211.chr6.nic	protein_coding	81752431,81749618	81752743,81752178	Gene ID= ENSG00000112773.15 TPM= 8.17 Transcript Type= NA
chr6	81745730	81752708	81745730	81752708	-	ENST00000320172.10@FAM46A	ENST00000320172.10	protein_coding	81752431,81751590,81745730	81752708,81752178,81750471	Gene ID= ENSG00000112773.15 TPM= 14.01 Transcript Type= protein_coding
chr6	82170239	82247767	82170239	82247767	-	transcript4214.chr6.nnic@IBTK	transcript4214.chr6.nnic	protein_coding	82247562,82240166,82234159,82231718,82227192,82225477,82224068,82223440,82220590,82217960,82216076,82214227,82212707,82211490,82211367,82210814,82204857,82202528,82201422,82200587,82200141,82196298,82194479,82191787,82191073,82181879,82175904,82173367,82172380,82170239	82247767,82240843,82234255,82231842,82227302,82225647,82224185,82223620,82220713,82218137,82216250,82214829,82212793,82211572,82211404,82210910,82204958,82202645,82201482,82200708,82200253,82196446,82194642,82191879,82191216,82182028,82176026,82173438,82172512,82171556	Gene ID= ENSG00000005700.14 TPM= 5.84 Transcript Type= NA
chr6	82363206	82367417	82363206	82367417	+	ENST00000535040.4@TPBG	ENST00000535040.4	protein_coding	82363206,82363646,82364623	82363539,82363908,82367417	Gene ID= ENSG00000146242.8 TPM= 9.34 Transcript Type= protein_coding
chr6	82364263	82366929	82364263	82366929	+	transcript4221.chr6.nnic@TPBG	transcript4221.chr6.nnic	protein_coding	82364263,82364623,82364869	82364329,82364735,82366929	Gene ID= ENSG00000146242.8 TPM= 2.34 Transcript Type= NA
chr6	82364244	82367417	82364244	82367417	+	ENST00000543496.3@TPBG	ENST00000543496.3	protein_coding	82364244,82364623	82364329,82367417	Gene ID= ENSG00000146242.8 TPM= 10.51 Transcript Type= protein_coding
chr6	82892398	83065841	82892398	83065841	-	ENST00000369747.7@UBE3D	ENST00000369747.7	protein_coding	83065642,83057826,83054148,83044428,83038416,83023969,83022453,83018973,82957312,82892398	83065841,83058022,83054238,83044659,83038485,83024038,83022561,83019136,82957450,82893042	Gene ID= ENSG00000118420.16 TPM= 4.67 Transcript Type= protein_coding
chr6	83137676	83171350	83137676	83171350	+	ENST00000484282.1@DOPEY1	ENST00000484282.1	protein_coding	83137676,83140000,83140221,83141921,83145524,83147236,83148759,83151593,83151883,83152288,83153511,83153894,83154180,83155951,83157182,83158567,83159796,83162790,83167862,83169478,83170289	83139162,83140111,83140403,83142046,83145658,83147291,83148863,83151659,83152027,83152367,83153620,83154043,83154241,83156103,83157318,83158622,83159960,83162919,83168756,83169534,83171350	Gene ID= ENSG00000083097.14 TPM= 2.34 Transcript Type= processed_transcript
chr6	83164873	83193293	83164873	83193293	-	ENST00000513973.5@PGM3	ENST00000513973.5	protein_coding	83193179,83190809,83188614,83187008,83182845,83181736,83179810,83178673,83175962,83174374,83171937,83170305,83164873	83193293,83191014,83188798,83187075,83182978,83181931,83179967,83178756,83176060,83174487,83172059,83170478,83169323	Gene ID= ENSG00000013375.15 TPM= 4.67 Transcript Type= protein_coding
chr6	83168528	83193266	83168528	83193266	-	ENST00000283977.8@PGM3	ENST00000283977.8	protein_coding	83193179,83188614,83187008,83182845,83181736,83179810,83178673,83175962,83174374,83171937,83170305,83168528	83193266,83188798,83187075,83182978,83181931,83179967,83178756,83176060,83174487,83172059,83170478,83169323	Gene ID= ENSG00000013375.15 TPM= 1.17 Transcript Type= protein_coding
chr6	83211577	83431047	83211577	83431047	-	transcript4243.chr6.nnic@ME1	transcript4243.chr6.nnic	protein_coding	83430877,83407768,83398367,83352064,83346173,83315310,83276116,83253629,83239539,83237717,83228826,83227335,83223760,83216498,83211577	83431047,83407901,83398516,83352139,83346334,83315413,83276153,83253738,83239636,83237830,83228931,83227477,83223933,83216596,83212094	Gene ID= ENSG00000065833.8 TPM= 2.34 Transcript Type= NA
chr6	83210389	83431071	83210389	83431071	-	ENST00000369705.3@ME1	ENST00000369705.3	protein_coding	83430877,83407768,83398367,83352064,83346173,83315310,83253629,83239539,83237717,83228826,83227335,83223760,83216498,83210389	83431071,83407901,83398516,83352139,83346334,83315413,83253738,83239636,83237830,83228931,83227477,83223933,83216596,83212094	Gene ID= ENSG00000065833.8 TPM= 11.68 Transcript Type= protein_coding
chr6	83425162	83429373	83425162	83429373	-	transcript4254.chr6.nnic@NA	transcript4254.chr6.nnic	NA	83425162	83429373	Gene ID= novel_gene_chr6_4255 TPM= 2.34 Transcript Type= NA
chr6	83512538	83525704	83512538	83525704	+	ENST00000369700.3@PRSS35	ENST00000369700.3	protein_coding	83512538,83523422	83512694,83525704	Gene ID= ENSG00000146250.6 TPM= 2.34 Transcript Type= protein_coding
chr6	83859643	83967424	83859643	83967424	+	ENST00000369681.9@CYB5R4	ENST00000369681.9	protein_coding	83859643,83864175,83893522,83909009,83914416,83918005,83919397,83921082,83922438,83924470,83934595,83936224,83940056,83940515,83955298,83959824	83859857,83864328,83893622,83909090,83914448,83918065,83919454,83921175,83922470,83924592,83934735,83936376,83940206,83940601,83955462,83967424	Gene ID= ENSG00000065615.13 TPM= 5.84 Transcript Type= protein_coding
chr6	84124241	84227635	84124241	84227635	-	ENST00000403245.7@CEP162	ENST00000403245.7	protein_coding	84227580,84226337,84221057,84215776,84215282,84212957,84203981,84201737,84200789,84194884,84193609,84186332,84185187,84175214,84174727,84174048,84171606,84169328,84163144,84161746,84160812,84155298,84152545,84149562,84146687,84126378,84124241	84227635,84226452,84221171,84215922,84215465,84213024,84204096,84201767,84200905,84195075,84193690,84186623,84185448,84175347,84174954,84174188,84171718,84169433,84163270,84161909,84160916,84155510,84153179,84149703,84146785,84126512,84125276	Gene ID= ENSG00000135315.11 TPM= 1.17 Transcript Type= protein_coding
chr6	85450032	85495784	85450032	85495784	+	transcript4274.chr6.nnic@NT5E	transcript4274.chr6.nnic	protein_coding	85450032,85467060,85471237,85485235,85487335,85489494,85490508,85491977,85493841,85494936	85450478,85467282,85471425,85485432,85487489,85489599,85490657,85492177,85494879,85495784	Gene ID= ENSG00000135318.11 TPM= 2.34 Transcript Type= NA
chr6	85449584	85495791	85449584	85495791	+	ENST00000369651.7@NT5E	ENST00000369651.7	protein_coding	85449584,85467060,85471237,85485235,85487335,85489494,85491977,85493841	85450478,85467282,85471425,85485432,85487489,85489599,85492177,85495791	Gene ID= ENSG00000135318.11 TPM= 1.17 Transcript Type= protein_coding
chr6	85450091	85495778	85450091	85495778	+	ENST00000257770.7@NT5E	ENST00000257770.7	protein_coding	85450091,85467060,85471237,85485235,85487335,85489494,85490508,85491977,85493841	85450478,85467282,85471425,85485432,85487489,85489599,85490657,85492177,85495778	Gene ID= ENSG00000135318.11 TPM= 26.85 Transcript Type= protein_coding
chr6	85450091	85471599	85450091	85471599	+	ENST00000369646.7@NT5E	ENST00000369646.7	protein_coding	85450091,85467060,85471237	85450478,85467282,85471599	Gene ID= ENSG00000135318.11 TPM= 3.5 Transcript Type= protein_coding
chr6	85450030	85452255	85450030	85452255	+	transcript4281.chr6.nnic@NA	transcript4281.chr6.nnic	NA	85450030	85452255	Gene ID= novel_gene_chr6_4282 TPM= 3.5 Transcript Type= NA
chr6	85505798	85594156	85505798	85594156	-	ENST00000505648.5@SNX14	ENST00000505648.5	protein_coding	85593834,85574258,85572298,85572137,85567534,85565332,85557976,85549723,85548301,85547506,85547317,85547112,85543605,85543182,85541985,85538838,85536792,85533599,85530192,85528262,85526126,85518008,85517756,85514506,85514070,85513800,85507968,85507233,85505798	85594156,85574378,85572374,85572215,85567577,85565419,85558060,85549879,85548376,85547550,85547397,85547226,85543760,85543306,85542043,85538864,85536924,85533800,85530275,85528362,85526237,85518048,85517875,85514629,85514234,85513895,85508059,85507289,85506005	Gene ID= ENSG00000135317.12 TPM= 7.97 Transcript Type= protein_coding
chr6	85505802	85593942	85505802	85593942	-	transcript4296.chr6.nic@SNX14	transcript4296.chr6.nic	protein_coding	85593579,85574258,85572298,85572137,85557976,85549723,85548301,85547506,85547317,85547112,85543605,85543182,85541985,85538838,85536792,85533599,85530192,85528262,85526126,85518008,85517756,85514506,85514070,85513800,85507968,85507233,85505802	85593942,85574378,85572374,85572215,85558060,85549879,85548376,85547550,85547397,85547226,85543760,85543306,85542043,85538864,85536924,85533800,85530275,85528362,85526237,85518048,85517875,85514629,85514234,85513895,85508059,85507289,85506005	Gene ID= ENSG00000135317.12 TPM= 7.97 Transcript Type= NA
chr6	85505499	85593895	85505499	85593895	-	ENST00000314673.7@SNX14	ENST00000314673.7	protein_coding	85593579,85574258,85572298,85572137,85567534,85565332,85557976,85549723,85548301,85547506,85547317,85547112,85543605,85543182,85541985,85538838,85536792,85533599,85530192,85528262,85526126,85518008,85517756,85514506,85514070,85513800,85507968,85507233,85505499	85593895,85574378,85572374,85572215,85567577,85565419,85558060,85549879,85548376,85547550,85547397,85547226,85543760,85543306,85542043,85538864,85536924,85533800,85530275,85528362,85526237,85518048,85517875,85514629,85514234,85513895,85508059,85507289,85506005	Gene ID= ENSG00000135317.12 TPM= 13.43 Transcript Type= protein_coding
chr6	85505802	85593850	85505802	85593850	-	ENST00000369627.6@SNX14	ENST00000369627.6	protein_coding	85593579,85574258,85572298,85572137,85567534,85565332,85557976,85549723,85548301,85547506,85547317,85547112,85543605,85543182,85541985,85536792,85533599,85530192,85528262,85526126,85518008,85517756,85514506,85514070,85513800,85507968,85507233,85505802	85593850,85574378,85572374,85572215,85567577,85565419,85558060,85549879,85548376,85547550,85547397,85547226,85543760,85543306,85542043,85536924,85533800,85530275,85528362,85526237,85518048,85517875,85514629,85514234,85513895,85508059,85507289,85506005	Gene ID= ENSG00000135317.12 TPM= 19.85 Transcript Type= protein_coding
chr6	85608335	85643870	85608335	85643870	-	transcript4309.chr6.nnic@SYNCRIP	transcript4309.chr6.nnic	protein_coding	85643750,85641292,85640446,85640221,85637243,85636967,85623977,85622482,85619268,85618818,85614981,85611833,85608335	85643870,85641451,85640564,85640328,85637356,85637143,85624112,85622687,85619417,85618939,85615347,85612923,85611507	Gene ID= ENSG00000135316.17 TPM= 2.34 Transcript Type= NA
chr6	85608329	85643870	85608329	85643870	-	transcript4315.chr6.nic@SYNCRIP	transcript4315.chr6.nic	protein_coding	85643750,85641292,85640446,85640221,85637243,85636967,85623977,85622482,85619268,85618818,85614981,85608329	85643870,85641451,85640564,85640328,85637356,85637143,85624112,85622687,85619417,85618939,85615347,85612923	Gene ID= ENSG00000135316.17 TPM= 2.34 Transcript Type= NA
chr6	85614202	85643870	85614202	85643870	-	transcript4337.chr6.nic@SYNCRIP	transcript4337.chr6.nic	protein_coding	85643750,85641292,85640446,85640221,85637243,85636967,85623977,85622482,85619268,85618818,85614202	85643870,85641451,85640564,85640328,85637356,85637143,85624112,85622687,85619417,85618939,85615347	Gene ID= ENSG00000135316.17 TPM= 5.25 Transcript Type= NA
chr6	85614202	85642974	85614202	85642974	-	transcript4338.chr6.nic@SYNCRIP	transcript4338.chr6.nic	protein_coding	85642797,85640446,85640221,85637243,85636967,85623977,85622482,85619268,85618818,85614202	85642974,85640564,85640328,85637356,85637143,85624112,85622687,85619417,85618939,85615347	Gene ID= ENSG00000135316.17 TPM= 2.92 Transcript Type= NA
chr6	85608329	85642991	85608329	85642991	-	ENST00000355238.10@SYNCRIP	ENST00000355238.10	protein_coding	85642797,85641292,85640446,85640221,85637243,85636967,85623977,85622482,85619268,85618818,85614981,85608329	85642991,85641451,85640564,85640328,85637356,85637143,85624112,85622687,85619417,85618939,85615347,85612923	Gene ID= ENSG00000135316.17 TPM= 5.84 Transcript Type= protein_coding
chr6	85677084	85678733	85677084	85678733	-	ENST00000414002.5@SNHG5	ENST00000414002.5	processed_transcript	85678694,85678136,85677954,85677795,85677424,85677084	85678733,85678188,85678032,85677875,85677492,85677191	Gene ID= ENSG00000203875.10 TPM= 74.73 Transcript Type= lincRNA
chr6	85676990	85678736	85676990	85678736	-	ENST00000369605.8@SNHG5	ENST00000369605.8	processed_transcript	85678136,85677954,85677795,85677424,85676990	85678736,85678032,85677875,85677492,85677191	Gene ID= ENSG00000203875.10 TPM= 2.34 Transcript Type= lincRNA
chr6	85677084	85678736	85677084	85678736	-	transcript4346.chr6.nic@SNHG5	transcript4346.chr6.nic	processed_transcript	85678694,85678136,85677954,85677424,85677084	85678736,85678188,85678032,85677492,85677191	Gene ID= ENSG00000203875.10 TPM= 2.34 Transcript Type= NA
chr6	85677084	85678736	85677084	85678736	-	transcript4350.chr6.nic@SNHG5	transcript4350.chr6.nic	processed_transcript	85678694,85678136,85677424,85677084	85678736,85678188,85677492,85677191	Gene ID= ENSG00000203875.10 TPM= 3.5 Transcript Type= NA
chr6	87155549	87264196	87155549	87264196	+	ENST00000369577.7@ZNF292	ENST00000369577.7	protein_coding	87155549,87215903,87216299,87218596,87233325,87243475,87245503,87254650	87155759,87216057,87216377,87218731,87233527,87243611,87245644,87264196	Gene ID= ENSG00000188994.12 TPM= 8.17 Transcript Type= protein_coding
chr6	87152833	87170364	87152833	87170364	+	ENST00000392985.3@ZNF292	ENST00000392985.3	protein_coding	87152833,87155191,87155563,87169674	87152869,87155361,87155759,87170364	Gene ID= ENSG00000188994.12 TPM= 1.17 Transcript Type= protein_coding
chr6	87322593	87342322	87322593	87342322	+	ENST00000229570.9@SMIM8	ENST00000229570.9	protein_coding	87322593,87337009,87340116	87322632,87337166,87342322	Gene ID= ENSG00000111850.10 TPM= 4.67 Transcript Type= protein_coding
chr6	87472959	87512264	87472959	87512264	+	transcript4385.chr6.nic@SLC35A1	transcript4385.chr6.nic	protein_coding	87472959,87477362,87500508,87501158,87506382,87511399	87473019,87477539,87500667,87501310,87509175,87512264	Gene ID= ENSG00000164414.17 TPM= 4.67 Transcript Type= NA
chr6	87472959	87512336	87472959	87512336	+	transcript4391.chr6.nnic@SLC35A1	transcript4391.chr6.nnic	protein_coding	87472959,87477362,87501158,87506382,87511399	87473019,87477539,87501310,87509175,87512336	Gene ID= ENSG00000164414.17 TPM= 3.5 Transcript Type= NA
chr6	87472977	87512336	87472977	87512336	+	ENST00000369552.8@SLC35A1	ENST00000369552.8	protein_coding	87472977,87477362,87500508,87501158,87506382,87508420,87509041,87511399	87473019,87477539,87500667,87501310,87506448,87508596,87509175,87512336	Gene ID= ENSG00000164414.17 TPM= 38.53 Transcript Type= protein_coding
chr6	87489833	87493273	87489833	87493273	-	transcript4396.chr6.nnic@NA	transcript4396.chr6.nnic	NA	87489833	87493273	Gene ID= novel_gene_chr6_4397 TPM= 3.5 Transcript Type= NA
chr6	87514378	87589988	87514378	87589988	-	transcript4400.chr6.nnic@RARS2	transcript4400.chr6.nnic	protein_coding	87589701,87585046,87583464,87569517,87564130,87562702,87555408,87548591,87545616,87541918,87530784,87529542,87524557,87521464,87520180,87519583,87518824,87518630,87518169,87516806,87514957,87514378	87589988,87585263,87583586,87569590,87564232,87562785,87555505,87548646,87545699,87541994,87530942,87529648,87524652,87521524,87520256,87519707,87518891,87518739,87518264,87516880,87515020,87514499	Gene ID= ENSG00000146282.17 TPM= 2.34 Transcript Type= NA
chr6	87514378	87589990	87514378	87589990	-	transcript4404.chr6.nnic@RARS2	transcript4404.chr6.nnic	protein_coding	87589701,87569517,87564130,87562702,87555408,87548591,87545616,87541918,87534735,87530784,87529542,87524557,87521464,87520180,87519583,87518824,87518630,87518169,87516806,87514957,87514378	87589990,87569590,87564232,87562785,87555505,87548646,87545699,87541994,87534858,87530942,87529648,87524652,87521524,87520256,87519707,87518891,87518739,87518264,87516880,87515020,87514499	Gene ID= ENSG00000146282.17 TPM= 2.34 Transcript Type= NA
chr6	87513938	87589990	87513938	87589990	-	transcript4408.chr6.nnic@RARS2	transcript4408.chr6.nnic	protein_coding	87589701,87569517,87564130,87562702,87555408,87548591,87545616,87541918,87530784,87529542,87524557,87521464,87520180,87519583,87518824,87518630,87518169,87516806,87514957,87513938	87589990,87569590,87564232,87562785,87555505,87548646,87545699,87541994,87530942,87529648,87524652,87521524,87520256,87519707,87518891,87518739,87518264,87516880,87515020,87514499	Gene ID= ENSG00000146282.17 TPM= 5.25 Transcript Type= NA
chr6	87513938	87589990	87513938	87589990	-	transcript4416.chr6.nnic@RARS2	transcript4416.chr6.nnic	protein_coding	87589701,87569517,87564130,87562702,87555408,87545616,87541918,87530784,87529542,87524557,87521464,87520180,87519583,87518824,87518630,87518169,87516806,87514957,87513938	87589990,87569590,87564232,87562785,87555505,87545699,87541994,87530942,87529648,87524652,87521524,87520256,87519707,87518891,87518739,87518264,87516880,87515020,87514499	Gene ID= ENSG00000146282.17 TPM= 4.09 Transcript Type= NA
chr6	87514378	87590003	87514378	87590003	-	ENST00000369536.9@RARS2	ENST00000369536.9	protein_coding	87589922,87569517,87564130,87562702,87555408,87548591,87545616,87541918,87530784,87529542,87524557,87521464,87520180,87519583,87518824,87518630,87518169,87516806,87514957,87514378	87590003,87569590,87564232,87562785,87555505,87548646,87545699,87541994,87530942,87529648,87524652,87521524,87520256,87519707,87518891,87518739,87518264,87516880,87515020,87514499	Gene ID= ENSG00000146282.17 TPM= 19.85 Transcript Type= protein_coding
chr6	87590121	87667451	87590121	87667451	+	ENST00000392844.7@ORC3	ENST00000392844.7	protein_coding	87590121,87594353,87601784,87603384,87605917,87607673,87609096,87612089,87616314,87621354,87621950,87634845,87636407,87653116,87656906,87657921,87663003,87664743,87665754,87667018	87590192,87594407,87601881,87603528,87606021,87607824,87609229,87612248,87616427,87621487,87622013,87634961,87636486,87653249,87656982,87658018,87663144,87664859,87665833,87667451	Gene ID= ENSG00000135336.14 TPM= 11.48 Transcript Type= protein_coding
chr6	87590123	87677819	87590123	87677819	+	transcript4437.chr6.nnic@ORC3	transcript4437.chr6.nnic	protein_coding	87590123,87594353,87601784,87603384,87605917,87607673,87609096,87612089,87616314,87621354,87621950,87634845,87636407,87653116,87656906,87657921,87663003,87664743,87665754,87677714	87590192,87594407,87601881,87603528,87606021,87607824,87609229,87612248,87616427,87621487,87622013,87634961,87636486,87653249,87656982,87658018,87663144,87664859,87665833,87677819	Gene ID= ENSG00000135336.14 TPM= 2.92 Transcript Type= NA
chr6	87590067	87667453	87590067	87667453	+	ENST00000546266.5@ORC3	ENST00000546266.5	protein_coding	87590067,87594353,87603384,87605917,87607673,87609096,87612089,87616314,87621354,87621950,87634845,87636407,87653116,87656906,87657921,87663003,87664743,87665754,87667018	87590192,87594407,87603528,87606021,87607824,87609229,87612248,87616427,87621487,87622013,87634961,87636486,87653249,87656982,87658018,87663144,87664859,87665833,87667453	Gene ID= ENSG00000135336.14 TPM= 1.55 Transcript Type= protein_coding
chr6	87590135	87667451	87590135	87667451	+	ENST00000257789.4@ORC3	ENST00000257789.4	protein_coding	87590135,87594353,87601784,87603384,87605917,87607673,87609096,87612089,87616314,87621354,87621950,87634845,87636407,87653116,87656903,87657921,87663003,87664743,87665754,87667018	87590192,87594407,87601881,87603528,87606021,87607824,87609229,87612248,87616427,87621487,87622013,87634961,87636486,87653249,87656982,87658018,87663144,87664859,87665833,87667451	Gene ID= ENSG00000135336.14 TPM= 2.72 Transcript Type= protein_coding
chr6	87590130	87595437	87590130	87595437	+	ENST00000468486.2@ORC3	ENST00000468486.2	protein_coding	87590130,87594353,87594527,87595172	87590192,87594407,87594613,87595437	Gene ID= ENSG00000135336.14 TPM= 2.34 Transcript Type= retained_intron
chr6	87694334	87698387	87694334	87698387	+	transcript4451.chr6.nnic@NA	transcript4451.chr6.nnic	NA	87694334	87698387	Gene ID= novel_gene_chr6_4452 TPM= 9.34 Transcript Type= NA
chr6	87698402	87702252	87698402	87702252	-	transcript4453.chr6.nnic@NA	transcript4453.chr6.nnic	NA	87698402	87702252	Gene ID= novel_gene_chr6_4454 TPM= 9.34 Transcript Type= NA
chr6	88165163	88166759	88165163	88166759	-	transcript4458.chr6.nnic@NA	transcript4458.chr6.nnic	NA	88165163	88166759	Gene ID= novel_gene_chr6_4459 TPM= 4.67 Transcript Type= NA
chr6	88610272	88963721	88610272	88963721	-	ENST00000369485.8@RNGTT	ENST00000369485.8	protein_coding	88963346,88941071,88929164,88928985,88906365,88904715,88891806,88890495,88853629,88849755,88844357,88801564,88769774,88678353,88614272,88610272	88963721,88941180,88929267,88929073,88906440,88904955,88891915,88890596,88853764,88849826,88844521,88801632,88769874,88678419,88614395,88612882	Gene ID= ENSG00000111880.15 TPM= 8.17 Transcript Type= protein_coding
chr6	88677994	88963561	88677994	88963561	-	ENST00000627296.1@RNGTT	ENST00000627296.1	protein_coding	88963346,88941071,88929164,88928985,88906365,88904715,88891806,88890495,88853629,88849755,88844357,88801564,88769774,88677994	88963561,88941180,88929267,88929073,88906440,88904955,88891915,88890596,88853764,88849826,88844521,88801632,88769874,88678419	Gene ID= ENSG00000111880.15 TPM= 1.17 Transcript Type= retained_intron
chr6	89080748	89084838	89080748	89084838	+	transcript4471.chr6.nnic@PNRC1	transcript4471.chr6.nnic	protein_coding	89080748,89081079,89083753	89080973,89081434,89084838	Gene ID= ENSG00000146278.10 TPM= 10.51 Transcript Type= NA
chr6	89080751	89084830	89080751	89084830	+	transcript4477.chr6.nnic@PNRC1	transcript4477.chr6.nnic	protein_coding	89080751,89083753	89081197,89084830	Gene ID= ENSG00000146278.10 TPM= 4.09 Transcript Type= NA
chr6	89080778	89085160	89080778	89085160	+	ENST00000336032.3@PNRC1	ENST00000336032.3	protein_coding	89080778,89083753	89081434,89085160	Gene ID= ENSG00000146278.10 TPM= 15.76 Transcript Type= protein_coding
chr6	89081528	89084836	89081528	89084836	+	transcript4478.chr6.nnic@NA	transcript4478.chr6.nnic	NA	89081528	89084836	Gene ID= novel_gene_chr6_4479 TPM= 3.5 Transcript Type= NA
chr6	89146050	89165565	89146050	89165565	+	ENST00000275072.4@PM20D2	ENST00000275072.4	protein_coding	89146050,89149265,89153043,89154748,89158325,89161783,89162109	89146609,89149413,89153185,89154902,89158460,89161890,89165565	Gene ID= ENSG00000146281.5 TPM= 5.84 Transcript Type= protein_coding
chr6	89326625	89352848	89326625	89352848	-	ENST00000435041.2@UBE2J1	ENST00000435041.2	protein_coding	89352539,89343683,89342324,89338459,89338205,89335302,89333086,89326625	89352848,89343756,89342455,89338543,89338310,89335431,89333205,89329957	Gene ID= ENSG00000198833.6 TPM= 8.17 Transcript Type= protein_coding
chr6	89363478	89366516	89363478	89366516	-	transcript4504.chr6.nnic@NA	transcript4504.chr6.nnic	NA	89363478	89366516	Gene ID= novel_gene_chr6_4505 TPM= 2.34 Transcript Type= NA
chr6	89364998	89412233	89364998	89412233	-	transcript4501.chr6.nnic@RRAGD	transcript4501.chr6.nnic	protein_coding	89411846,89387295,89377671,89372437,89364998	89412233,89387590,89377813,89372585,89368207	Gene ID= ENSG00000025039.14 TPM= 10.51 Transcript Type= NA
chr6	89433134	89631477	89433134	89631477	+	transcript4509.chr6.nnic@ANKRD6	transcript4509.chr6.nnic	protein_coding	89433134,89566834,89595916,89603029,89606007,89612272,89613792,89616559,89617837,89621922,89623410,89623872,89624539,89627583,89629112,89630433	89433375,89567096,89596014,89603127,89606105,89612370,89613890,89616657,89618031,89622026,89623544,89624057,89624691,89627696,89629238,89631477	Gene ID= ENSG00000135299.16 TPM= 2.34 Transcript Type= NA
chr6	89433134	89631477	89433134	89631477	+	transcript4518.chr6.nic@ANKRD6	transcript4518.chr6.nic	protein_coding	89433134,89566834,89595916,89603029,89612272,89613792,89616559,89617954,89621922,89623410,89623872,89624539,89627583,89629112,89630433	89433375,89567096,89596014,89603127,89612370,89613890,89616657,89618031,89622026,89623544,89624057,89624691,89627696,89629238,89631477	Gene ID= ENSG00000135299.16 TPM= 2.34 Transcript Type= NA
chr6	89433213	89631497	89433213	89631497	+	ENST00000447838.6@ANKRD6	ENST00000447838.6	protein_coding	89433213,89566834,89595916,89603029,89606007,89612272,89613792,89616559,89617954,89621922,89623410,89623872,89624539,89627583,89629112,89630433	89433375,89567096,89596014,89603127,89606105,89612370,89613890,89616657,89618031,89622026,89623544,89624057,89624691,89627696,89629223,89631497	Gene ID= ENSG00000135299.16 TPM= 14.01 Transcript Type= protein_coding
chr6	89450680	89452711	89450680	89452711	-	transcript4552.chr6.nnic@NA	transcript4552.chr6.nnic	NA	89450680	89452711	Gene ID= novel_gene_chr6_4553 TPM= 2.34 Transcript Type= NA
chr6	89632224	89638753	89632224	89638753	-	ENST00000523377.1@LYRM2	ENST00000523377.1	protein_coding	89638672,89637742,89632224	89638753,89637882,89637353	Gene ID= ENSG00000083099.10 TPM= 8.17 Transcript Type= protein_coding
chr6	89642499	89819723	89642499	89819723	-	ENST00000369393.7@MDN1	ENST00000369393.7	protein_coding	89819506,89803328,89794577,89794100,89793762,89790159,89789780,89787854,89785012,89781399,89780212,89776600,89774621,89772573,89771561,89762319,89761645,89758816,89758255,89756277,89754083,89753512,89751431,89750354,89749543,89749223,89747329,89745492,89745273,89743576,89743150,89740234,89738326,89732557,89730726,89728931,89727833,89725199,89723512,89722955,89719136,89718767,89718366,89716650,89715653,89714543,89713148,89712575,89712036,89710681,89708496,89707361,89706059,89701904,89701558,89700646,89700063,89699601,89698865,89696360,89695605,89694074,89692443,89690673,89689870,89688573,89688078,89687344,89686902,89685827,89684876,89683831,89683132,89680589,89678599,89677570,89676102,89675464,89674104,89673236,89672547,89672200,89670919,89668014,89664487,89662792,89662087,89661431,89658610,89658209,89656700,89655764,89654164,89652992,89652192,89650732,89650024,89648256,89648032,89646540,89645015,89642499	89819723,89803554,89794801,89794207,89793954,89790401,89789911,89787957,89785126,89781592,89780293,89776695,89774733,89772721,89771621,89762530,89761748,89758960,89758351,89756390,89754230,89753622,89751582,89750532,89749751,89749369,89747470,89745626,89745411,89743714,89743280,89740378,89738455,89732775,89730923,89729139,89727955,89725396,89723619,89723143,89719225,89719030,89718627,89716809,89715769,89714751,89713296,89712786,89712256,89710794,89708628,89707476,89706192,89702061,89701678,89700856,89700294,89699727,89699035,89696574,89695992,89694183,89693148,89690834,89690143,89688808,89688173,89687438,89687023,89685973,89684985,89683904,89683330,89680751,89678745,89677696,89676207,89675579,89674589,89673462,89672702,89672363,89671080,89668151,89664628,89662967,89662239,89661578,89658917,89658370,89656801,89655968,89654334,89653155,89652281,89650847,89650198,89648329,89648146,89646603,89645157,89644193	Gene ID= ENSG00000112159.11 TPM= 2.34 Transcript Type= protein_coding
chr6	89829900	89862793	89829900	89862793	+	ENST00000419040.6@CASP8AP2	ENST00000419040.6	protein_coding	89829900,89846562,89853166,89854817,89855470,89857084,89862126	89830067,89846644,89853234,89854917,89855544,89857199,89862793	Gene ID= ENSG00000118412.12 TPM= 1.17 Transcript Type= protein_coding
chr6	90515634	90587071	90515634	90587071	-	transcript4588.chr6.nnic@MAP3K7	transcript4588.chr6.nnic	protein_coding	90586764,90571697,90568558,90561622,90560076,90556500,90553458,90552049,90550468,90548047,90547258,90536337,90523678,90519258,90518447,90515634	90587071,90571807,90568623,90561667,90560234,90556624,90553586,90552179,90550549,90548177,90547387,90536401,90523783,90519319,90518562,90516681	Gene ID= ENSG00000135341.17 TPM= 2.34 Transcript Type= NA
chr6	90513573	90587045	90513573	90587045	-	ENST00000369329.7@MAP3K7	ENST00000369329.7	protein_coding	90586764,90571697,90568558,90561622,90560076,90556500,90553458,90552049,90550468,90548047,90547258,90544552,90536337,90523678,90519258,90518447,90513573	90587045,90571807,90568623,90561667,90560214,90556624,90553586,90552179,90550549,90548177,90547387,90544632,90536401,90523783,90519319,90518562,90516681	Gene ID= ENSG00000135341.17 TPM= 8.17 Transcript Type= protein_coding
chr6	90513573	90587045	90513573	90587045	-	ENST00000369332.7@MAP3K7	ENST00000369332.7	protein_coding	90586764,90571697,90568558,90561622,90560076,90556500,90553458,90552049,90550468,90548047,90547258,90536337,90523678,90519258,90518447,90513573	90587045,90571807,90568623,90561667,90560214,90556624,90553586,90552179,90550549,90548177,90547387,90536401,90523783,90519319,90518562,90516681	Gene ID= ENSG00000135341.17 TPM= 15.18 Transcript Type= protein_coding
chr6	90582882	90587081	90582882	90587081	-	transcript4596.chr6.nnic@NA	transcript4596.chr6.nnic	NA	90582882	90587081	Gene ID= novel_gene_chr6_4597 TPM= 11.68 Transcript Type= NA
chr6	95577543	95609457	95577543	95609457	+	ENST00000358812.8@MANEA	ENST00000358812.8	protein_coding	95577543,95586402,95596737,95604827,95605748	95577638,95586983,95596846,95604903,95609457	Gene ID= ENSG00000172469.15 TPM= 21.02 Transcript Type= protein_coding
chr6	96521808	96555276	96521808	96555276	+	ENST00000369278.4@UFL1	ENST00000369278.4	protein_coding	96521808,96523146,96524382,96525297,96526321,96528502,96534263,96536244,96537374,96538631,96540535,96542894,96548164,96549412,96549669,96551433,96551838,96552482,96553285	96521950,96523291,96524410,96525394,96526435,96528632,96534321,96536390,96537549,96538810,96540655,96543016,96548281,96549578,96549799,96551513,96551923,96552662,96555276	Gene ID= ENSG00000014123.9 TPM= 16.35 Transcript Type= protein_coding
chr6	96563122	96619930	96563122	96619930	+	transcript4623.chr6.nnic@FHL5	transcript4623.chr6.nnic	protein_coding	96563122,96601053,96603602,96604750,96605902,96610572,96615609	96563355,96601152,96603772,96604924,96606071,96610758,96619930	Gene ID= ENSG00000112214.10 TPM= 3.5 Transcript Type= NA
chr6	96563105	96619930	96563105	96619930	+	transcript4634.chr6.nic@FHL5	transcript4634.chr6.nic	protein_coding	96563105,96603602,96604750,96605902,96610572,96615609	96563355,96603772,96604924,96606071,96610758,96619930	Gene ID= ENSG00000112214.10 TPM= 7.01 Transcript Type= NA
chr6	96889313	96897881	96889313	96897881	-	ENST00000316149.7@NDUFAF4	ENST00000316149.7	protein_coding	96897666,96896744,96889313	96897881,96896847,96891391	Gene ID= ENSG00000123545.5 TPM= 16.35 Transcript Type= protein_coding
chr6	98873725	98948006	98873725	98948006	-	ENST00000229971.2@FBXL4	ENST00000229971.2	protein_coding	98947806,98927705,98926477,98917374,98905426,98899268,98880553,98875415,98873725	98948006,98927822,98927060,98917719,98905670,98899481,98880624,98875727,98874441	Gene ID= ENSG00000112234.8 TPM= 3.5 Transcript Type= protein_coding
chr6	98873924	98948000	98873924	98948000	-	transcript4665.chr6.nnic@FBXL4	transcript4665.chr6.nnic	protein_coding	98947806,98934762,98927705,98926477,98905426,98899268,98880553,98873924	98948000,98934879,98927822,98927060,98905670,98899481,98880624,98875727	Gene ID= ENSG00000112234.8 TPM= 2.34 Transcript Type= NA
chr6	99280667	99350013	99280667	99350013	-	transcript4674.chr6.nnic@FAXC	transcript4674.chr6.nnic	protein_coding	99349107,99342898,99333351,99291704,99280667	99350013,99343033,99333547,99291820,99281453	Gene ID= ENSG00000146267.11 TPM= 4.67 Transcript Type= NA
chr6	99369400	99394204	99369400	99394204	-	ENST00000254759.7@COQ3	ENST00000254759.7	protein_coding	99394074,99383698,99380189,99377386,99375940,99371428,99369400	99394204,99383824,99380341,99377485,99376182,99371587,99369820	Gene ID= ENSG00000132423.11 TPM= 3.5 Transcript Type= protein_coding
chr6	99398655	99425314	99398655	99425314	-	transcript4677.chr6.nnic@PNISR	transcript4677.chr6.nnic	protein_coding	99425215,99416349,99414572,99412551,99410741,99409173,99408081,99406031,99404603,99403829,99402540,99400544,99398655	99425314,99416428,99414690,99412739,99410964,99409344,99408271,99406168,99404702,99403882,99402710,99401630,99400311	Gene ID= ENSG00000132424.14 TPM= 5.84 Transcript Type= NA
chr6	99399964	99425315	99399964	99425315	-	transcript4683.chr6.nnic@PNISR	transcript4683.chr6.nnic	protein_coding	99425215,99414572,99412551,99410741,99409173,99408081,99406031,99404603,99403829,99402540,99400544,99399964	99425315,99414690,99412739,99410964,99409344,99408271,99406168,99404702,99403882,99402710,99401630,99400311	Gene ID= ENSG00000132424.14 TPM= 4.09 Transcript Type= NA
chr6	99399964	99425331	99399964	99425331	-	ENST00000438806.5@PNISR	ENST00000438806.5	protein_coding	99425215,99414572,99412551,99410741,99409173,99408081,99406031,99404603,99403829,99402540,99399964	99425331,99414690,99412739,99410964,99409344,99408271,99406168,99404702,99403882,99402710,99401630	Gene ID= ENSG00000132424.14 TPM= 2.92 Transcript Type= protein_coding
chr6	99399964	99425314	99399964	99425314	-	transcript4700.chr6.nic@PNISR	transcript4700.chr6.nic	protein_coding	99425215,99416349,99414572,99412551,99410741,99409173,99408081,99406031,99402540,99399964	99425314,99416428,99414690,99412739,99410964,99409344,99408271,99406168,99404702,99401630	Gene ID= ENSG00000132424.14 TPM= 6.42 Transcript Type= NA
chr6	99411791	99425314	99411791	99425314	-	transcript4717.chr6.nic@PNISR	transcript4717.chr6.nic	protein_coding	99425215,99416349,99414572,99411791	99425314,99416428,99414690,99412739	Gene ID= ENSG00000132424.14 TPM= 5.84 Transcript Type= NA
chr6	99411791	99425258	99411791	99425258	-	ENST00000466057.1@PNISR	ENST00000466057.1	protein_coding	99425215,99414572,99411791	99425258,99416428,99412739	Gene ID= ENSG00000132424.14 TPM= 5.84 Transcript Type= processed_transcript
chr6	99424922	99431373	99424922	99431373	+	ENST00000418945.1@AL513550.1	ENST00000418945.1	antisense_RNA	99424922,99430713	99425898,99431373	Gene ID= ENSG00000228506.1 TPM= 1.17 Transcript Type= antisense_RNA
chr6	99482262	99515489	99482262	99515489	-	ENST00000329966.10@USP45	ENST00000329966.10	protein_coding	99515392,99510121,99508610,99507428,99503765,99488681,99488200,99482262	99515489,99510230,99508782,99507531,99503865,99488820,99488295,99482883	Gene ID= ENSG00000123552.17 TPM= 1.17 Transcript Type= protein_coding
chr6	99520693	99531918	99520693	99531918	+	ENST00000452647.2@TSTD3	ENST00000452647.2	protein_coding	99520693,99526064,99531363,99531632	99521147,99526109,99531536,99531918	Gene ID= ENSG00000228439.5 TPM= 1.17 Transcript Type= protein_coding
chr6	99542380	99568973	99542380	99568973	-	ENST00000520429.5@CCNC	ENST00000520429.5	protein_coding	99568496,99562842,99561597,99561367,99558497,99551840,99550993,99550218,99549508,99546395,99545112,99542380	99568973,99562948,99561681,99561436,99558548,99551895,99551028,99550309,99549575,99546474,99545230,99543609	Gene ID= ENSG00000112237.12 TPM= 74.73 Transcript Type= protein_coding
chr6	99542387	99568663	99542387	99568663	-	transcript4732.chr6.nic@CCNC	transcript4732.chr6.nic	protein_coding	99568496,99562842,99561597,99561367,99558497,99551840,99549508,99546395,99545112,99542387	99568663,99562948,99561681,99561436,99558548,99551895,99551028,99546474,99545230,99543609	Gene ID= ENSG00000112237.12 TPM= 3.5 Transcript Type= NA
chr6	99543780	99568662	99543780	99568662	-	ENST00000518714.5@CCNC	ENST00000518714.5	protein_coding	99568496,99562842,99561597,99561367,99558497,99551840,99550993,99550218,99549508,99546395,99545112,99543780	99568662,99562948,99561681,99561436,99558548,99551895,99551028,99550309,99549575,99546474,99545230,99544273	Gene ID= ENSG00000112237.12 TPM= 4.67 Transcript Type= protein_coding
chr6	100508194	100881364	100508194	100881364	-	ENST00000369162.6@ASCC3	ENST00000369162.6	protein_coding	100881061,100867908,100864064,100848148,100805760,100800300,100799431,100798713,100767145,100766565,100725539,100718075,100715462,100679618,100662345,100661806,100655699,100652725,100651560,100650538,100647226,100646615,100644031,100642581,100638601,100631128,100629015,100627842,100627590,100625192,100606951,100606740,100605568,100601810,100589948,100589634,100540163,100517991,100516180,100512709,100509932,100508194	100881364,100868038,100864214,100848707,100805880,100800504,100799572,100798838,100767345,100766705,100725703,100718251,100715533,100679752,100662536,100662030,100655818,100652889,100651646,100650714,100647451,100646769,100644129,100642749,100638821,100631213,100629181,100627987,100627710,100625334,100607088,100606860,100605700,100601935,100590059,100589768,100540387,100518142,100516327,100512918,100510107,100509533	Gene ID= ENSG00000112249.13 TPM= 2.34 Transcript Type= protein_coding
chr6	100856303	100881311	100856303	100881311	-	ENST00000369143.2@ASCC3	ENST00000369143.2	protein_coding	100881061,100867908,100864064,100856303	100881311,100868038,100864214,100859202	Gene ID= ENSG00000112249.13 TPM= 2.34 Transcript Type= protein_coding
chr6	100881471	100882987	100881471	100882987	+	ENST00000565695.2@AL133338.1	ENST00000565695.2	antisense_RNA	100881471	100882987	Gene ID= ENSG00000260000.2 TPM= 1.17 Transcript Type= antisense_RNA
chr6	104728093	104859919	104728093	104859919	-	ENST00000262903.8@HACE1	ENST00000262903.8	protein_coding	104859567,104852317,104850907,104849142,104843223,104833042,104811311,104796929,104796655,104795579,104791504,104784985,104784417,104784086,104777206,104777013,104776741,104771925,104771193,104750341,104744512,104744160,104730303,104728093	104859919,104852371,104850996,104849246,104843298,104833173,104811393,104797025,104796756,104795685,104791654,104785319,104784485,104784173,104777317,104777110,104776828,104772074,104771389,104750472,104744610,104744230,104730416,104729764	Gene ID= ENSG00000085382.11 TPM= 10.51 Transcript Type= protein_coding
chr6	104728097	104859911	104728097	104859911	-	transcript4754.chr6.nic@HACE1	transcript4754.chr6.nic	protein_coding	104859567,104852317,104850907,104849142,104843223,104811311,104796929,104796655,104795579,104791504,104784985,104784417,104784086,104777206,104777013,104776741,104771925,104771193,104750341,104744512,104744160,104730303,104728097	104859911,104852371,104850996,104849246,104843298,104811393,104797025,104796756,104795685,104791654,104785319,104784485,104784173,104777317,104777110,104776828,104772074,104771389,104750472,104744610,104744230,104730416,104729764	Gene ID= ENSG00000085382.11 TPM= 2.34 Transcript Type= NA
chr6	105096822	105137174	105096822	105137174	-	ENST00000314641.9@BVES	ENST00000314641.9	protein_coding	105136969,105133352,105129379,105125391,105124547,105116701,105115686,105096822	105137174,105133588,105129503,105125578,105124655,105116868,105115827,105101213	Gene ID= ENSG00000112276.13 TPM= 2.34 Transcript Type= protein_coding
chr6	105322255	105403122	105322255	105403122	-	transcript4768.chr6.nic@PREP	transcript4768.chr6.nic	protein_coding	105402847,105397853,105377386,105376125,105373369,105368903,105352972,105333314,105328829,105323665,105322255	105403122,105397927,105377519,105376255,105373578,105369024,105353077,105333505,105329026,105323768,105323111	Gene ID= ENSG00000085377.13 TPM= 8.17 Transcript Type= NA
chr6	105316960	105403049	105316960	105403049	-	transcript4770.chr6.nic@PREP	transcript4770.chr6.nic	protein_coding	105402847,105397853,105377386,105376125,105373369,105368903,105352972,105333314,105328829,105316960	105403049,105397927,105377519,105376255,105373578,105369024,105353077,105333505,105329026,105323768	Gene ID= ENSG00000085377.13 TPM= 2.34 Transcript Type= NA
chr6	105392770	105397200	105392770	105397200	+	transcript4772.chr6.nnic@NA	transcript4772.chr6.nnic	NA	105392770	105397200	Gene ID= novel_gene_chr6_4773 TPM= 7.01 Transcript Type= NA
chr6	106098940	106109939	106098940	106109939	+	ENST00000369089.3@PRDM1	ENST00000369089.3	protein_coding	106098940,106099300,106104825,106106371,106106911	106099094,106099552,106105933,106106499,106109939	Gene ID= ENSG00000057657.15 TPM= 5.84 Transcript Type= protein_coding
chr6	106184476	106325791	106184476	106325791	-	ENST00000369076.7@ATG5	ENST00000369076.7	protein_coding	106325526,106316101,106308364,106293028,106279661,106248150,106201972,106184476	106325791,106316266,106308491,106293106,106279823,106248244,106202089,106186676	Gene ID= ENSG00000057663.14 TPM= 14.01 Transcript Type= protein_coding
chr6	106184476	106325417	106184476	106325417	-	ENST00000343245.7@ATG5	ENST00000343245.7	protein_coding	106325276,106316101,106308364,106293028,106279661,106248150,106201972,106184476	106325417,106316266,106308491,106293106,106279823,106248244,106202089,106186676	Gene ID= ENSG00000057663.14 TPM= 2.34 Transcript Type= protein_coding
chr6	106360808	106571978	106360808	106571978	+	ENST00000633556.1@CRYBG1	ENST00000633556.1	protein_coding	106360808,106451694,106511430,106519131,106525133,106525268,106527305,106530176,106539403,106541586,106543440,106544571,106544788,106551852,106552184,106553455,106555768,106558486,106560803,106561342,106563764,106568472	106361081,106451832,106513039,106521453,106525180,106525386,106527470,106530315,106539529,106541621,106543597,106544697,106544933,106551978,106552216,106553567,106555897,106558625,106560926,106561500,106563926,106571978	Gene ID= ENSG00000112297.14 TPM= 14.01 Transcript Type= protein_coding
chr6	106571971	106629487	106571971	106629487	-	ENST00000369063.7@RTN4IP1	ENST00000369063.7	protein_coding	106628748,106622818,106621425,106619202,106602874,106592164,106587679,106583328,106571971	106629487,106622969,106621493,106619326,106602922,106592300,106587862,106583420,106572103	Gene ID= ENSG00000130347.12 TPM= 3.5 Transcript Type= protein_coding
chr6	106969831	106975465	106969831	106975465	-	ENST00000619133.4@CD24	ENST00000619133.4	protein_coding	106975134,106974578,106969831	106975465,106974754,106971834	Gene ID= ENSG00000272398.5 TPM= 22.77 Transcript Type= protein_coding
chr6	106969833	106974755	106969833	106974755	-	ENST00000606017.1@CD24	ENST00000606017.1	protein_coding	106974578,106969833	106974755,106971834	Gene ID= ENSG00000272398.5 TPM= 14.59 Transcript Type= protein_coding
chr6	107028213	107051342	107028213	107051342	+	ENST00000311381.7@C6orf203	ENST00000311381.7	protein_coding	107028213,107039749,107044260,107051057	107028271,107040230,107044332,107051342	Gene ID= ENSG00000130349.9 TPM= 7.01 Transcript Type= protein_coding
chr6	107028213	107051336	107028213	107051336	+	ENST00000405204.6@C6orf203	ENST00000405204.6	protein_coding	107028213,107039749,107044260,107051057	107028797,107040230,107044332,107051336	Gene ID= ENSG00000130349.9 TPM= 1.17 Transcript Type= protein_coding
chr6	107152557	107459591	107152557	107459591	-	transcript4804.chr6.nnic@PDSS2	transcript4804.chr6.nnic	protein_coding	107458990,107334198,107274029,107245548,107212109,107193822,107152557	107459591,107334332,107274227,107245619,107212282,107193854,107154777	Gene ID= ENSG00000164494.11 TPM= 2.34 Transcript Type= NA
chr6	107152557	107459563	107152557	107459563	-	ENST00000369037.8@PDSS2	ENST00000369037.8	protein_coding	107458990,107334198,107274029,107245548,107212109,107210439,107193822,107152557	107459563,107334332,107274227,107245619,107212282,107210570,107193854,107154777	Gene ID= ENSG00000164494.11 TPM= 25.69 Transcript Type= protein_coding
chr6	107264186	107459564	107264186	107459564	-	ENST00000369031.4@PDSS2	ENST00000369031.4	protein_coding	107458990,107334198,107274029,107264186	107459564,107334332,107274227,107264512	Gene ID= ENSG00000164494.11 TPM= 2.34 Transcript Type= protein_coding
chr6	107456218	107458430	107456218	107458430	+	transcript4806.chr6.nnic@NA	transcript4806.chr6.nnic	NA	107456218	107458430	Gene ID= novel_gene_chr6_4807 TPM= 7.01 Transcript Type= NA
chr6	107490180	107659484	107490180	107659484	+	transcript4809.chr6.nnic@SOBP	transcript4809.chr6.nnic	protein_coding	107490180,107503657,107506242,107533459,107587080,107658207	107490712,107503795,107506427,107533610,107587175,107659484	Gene ID= ENSG00000112320.11 TPM= 2.34 Transcript Type= NA
chr6	107704651	107732395	107704651	107732395	-	ENST00000369025.6@SCML4	ENST00000369025.6	protein_coding	107731974,107720703,107707866,107704651	107732395,107720993,107708011,107705325	Gene ID= ENSG00000146285.13 TPM= 1.17 Transcript Type= protein_coding
chr6	107870765	107958199	107870765	107958199	-	transcript4829.chr6.nnic@SEC63	transcript4829.chr6.nnic	protein_coding	107957886,107924818,107921797,107913366,107912716,107911346,107908927,107906683,107906448,107904629,107902844,107901370,107897649,107893838,107893482,107882988,107881149,107876564,107872808,107870765	107958199,107924932,107921909,107913427,107912774,107911396,107909035,107906777,107906580,107904721,107902998,107901517,107897731,107893897,107893655,107883146,107881250,107876662,107872912,107871847	Gene ID= ENSG00000025796.13 TPM= 4.09 Transcript Type= NA
chr6	107867756	107958189	107867756	107958189	-	ENST00000369002.8@SEC63	ENST00000369002.8	protein_coding	107957886,107929415,107924818,107921797,107913366,107912716,107911346,107908927,107906683,107906448,107904629,107902844,107901370,107897649,107893838,107893482,107882988,107881149,107876564,107872808,107867756	107958189,107929514,107924932,107921909,107913427,107912774,107911396,107909035,107906777,107906580,107904721,107902998,107901517,107897731,107893897,107893655,107883146,107881250,107876662,107872912,107871847	Gene ID= ENSG00000025796.13 TPM= 18.68 Transcript Type= protein_coding
chr6	108041411	108074754	108041411	108074754	-	transcript4835.chr6.nic@OSTM1	transcript4835.chr6.nic	protein_coding	108074250,108064185,108054490,108051031,108049253,108042567,108041411	108074754,108064299,108054587,108051198,108049418,108044840,108042264	Gene ID= ENSG00000081087.14 TPM= 4.67 Transcript Type= NA
chr6	108042818	108074754	108042818	108074754	-	transcript4840.chr6.nic@OSTM1	transcript4840.chr6.nic	protein_coding	108074250,108064185,108054490,108051031,108049532,108049253,108042818	108074754,108064299,108054587,108051198,108049583,108049418,108044840	Gene ID= ENSG00000081087.14 TPM= 8.17 Transcript Type= NA
chr6	108041409	108074737	108041409	108074737	-	ENST00000193322.7@OSTM1	ENST00000193322.7	protein_coding	108074250,108064185,108054490,108051031,108049253,108041409	108074737,108064299,108054587,108051198,108049418,108044840	Gene ID= ENSG00000081087.14 TPM= 5.84 Transcript Type= protein_coding
chr6	108211222	108261260	108211222	108261260	-	ENST00000230085.12@SNX3	ENST00000230085.12	protein_coding	108260760,108222950,108214498,108211222	108261260,108223045,108214622,108212254	Gene ID= ENSG00000112335.14 TPM= 63.05 Transcript Type= protein_coding
chr6	108211513	108260964	108211513	108260964	-	ENST00000426155.6@SNX3	ENST00000426155.6	protein_coding	108260760,108214498,108211513	108260964,108214622,108212254	Gene ID= ENSG00000112335.14 TPM= 1.17 Transcript Type= protein_coding
chr6	108560848	108680751	108560848	108680751	+	transcript4868.chr6.nnic@FOXO3	transcript4868.chr6.nnic	protein_coding	108560848,108561086,108663455,108679827	108560956,108561829,108664889,108680751	Gene ID= ENSG00000118689.14 TPM= 13.14 Transcript Type= NA
chr6	108559763	108665829	108559763	108665829	+	transcript4873.chr6.nic@FOXO3	transcript4873.chr6.nic	protein_coding	108559763,108561086,108663455	108560015,108561829,108665829	Gene ID= ENSG00000118689.14 TPM= 23.64 Transcript Type= NA
chr6	108560845	108665829	108560845	108665829	+	transcript4881.chr6.nic@FOXO3	transcript4881.chr6.nic	protein_coding	108560845,108663455	108561829,108665829	Gene ID= ENSG00000118689.14 TPM= 16.64 Transcript Type= NA
chr6	108560866	108684768	108560866	108684768	+	ENST00000406360.1@FOXO3	ENST00000406360.1	protein_coding	108560866,108663455,108679827	108561829,108664889,108684768	Gene ID= ENSG00000118689.14 TPM= 60.71 Transcript Type= protein_coding
chr6	108656346	108680751	108656346	108680751	+	ENST00000540898.1@FOXO3	ENST00000540898.1	protein_coding	108656346,108663455,108679827	108656538,108664889,108680751	Gene ID= ENSG00000118689.14 TPM= 93.7 Transcript Type= protein_coding
chr6	108561034	108568060	108561034	108568060	+	transcript4883.chr6.nnic@NA	transcript4883.chr6.nnic	NA	108561034	108568060	Gene ID= novel_gene_chr6_4884 TPM= 3.5 Transcript Type= NA
chr6	108580185	108582840	108580185	108582840	-	transcript4885.chr6.nnic@NA	transcript4885.chr6.nnic	NA	108580185	108582840	Gene ID= novel_gene_chr6_4886 TPM= 10.51 Transcript Type= NA
chr6	108601319	108602373	108601319	108602373	-	transcript4887.chr6.nnic@NA	transcript4887.chr6.nnic	NA	108601319	108602373	Gene ID= novel_gene_chr6_4888 TPM= 2.34 Transcript Type= NA
chr6	108986442	109009575	108986442	109009575	-	transcript4891.chr6.nnic@SESN1	transcript4891.chr6.nnic	protein_coding	109009359,109002278,109001288,109000491,108998513,108994462,108992787,108990645,108988543,108986442	109009575,109002343,109001488,109000673,108998642,108994609,108992899,108990835,108988687,108987630	Gene ID= ENSG00000080546.13 TPM= 2.72 Transcript Type= NA
chr6	108986442	109009555	108986442	109009555	-	ENST00000356644.7@SESN1	ENST00000356644.7	protein_coding	109009359,109002278,109001288,109000491,108998513,108994462,108992787,108990645,108988543,108986442	109009555,109002343,109001488,109000673,108998755,108994609,108992899,108990835,108988687,108987630	Gene ID= ENSG00000080546.13 TPM= 69.86 Transcript Type= protein_coding
chr6	108986437	109094819	108986437	109094819	-	ENST00000436639.6@SESN1	ENST00000436639.6	protein_coding	109093795,109002278,109001288,109000491,108998513,108994462,108992787,108990645,108988543,108986437	109094819,109002343,109001488,109000673,108998755,108994609,108992899,108990835,108988687,108987630	Gene ID= ENSG00000080546.13 TPM= 21.99 Transcript Type= protein_coding
chr6	109095497	109156797	109095497	109156797	+	transcript4899.chr6.nic@CEP57L1	transcript4899.chr6.nic	protein_coding	109095497,109140421,109145219,109146758,109150118,109153833,109155230,109155791	109095575,109140675,109145381,109146937,109150239,109153949,109155307,109156797	Gene ID= ENSG00000183137.14 TPM= 3.5 Transcript Type= NA
chr6	109366518	109382444	109366518	109382444	-	ENST00000310786.8@CD164	ENST00000310786.8	protein_coding	109382204,109379579,109377900,109376074,109370411,109366518	109382444,109379662,109377971,109376112,109370467,109369017	Gene ID= ENSG00000135535.15 TPM= 333.35 Transcript Type= protein_coding
chr6	109366518	109382444	109366518	109382444	-	ENST00000324953.9@CD164	ENST00000324953.9	protein_coding	109382204,109379579,109377900,109376074,109366518	109382444,109379662,109377971,109376112,109369017	Gene ID= ENSG00000135535.15 TPM= 12.26 Transcript Type= protein_coding
chr6	109390215	109441171	109390215	109441171	-	ENST00000521072.6@PPIL6	ENST00000521072.6	protein_coding	109440456,109436104,109431157,109427094,109426847,109419187,109400035,109390215	109441171,109436199,109431345,109427156,109426994,109419243,109400170,109392937	Gene ID= ENSG00000185250.15 TPM= 2.34 Transcript Type= protein_coding
chr6	109414478	109440794	109414478	109440794	-	transcript4974.chr6.nnic@PPIL6	transcript4974.chr6.nnic	protein_coding	109440456,109436104,109431157,109427094,109426847,109419187,109414478	109440794,109436199,109431345,109427156,109426994,109419243,109415666	Gene ID= ENSG00000185250.15 TPM= 3.5 Transcript Type= NA
chr6	109440684	109443919	109440684	109443919	+	transcript4967.chr6.nic@SMPD2	transcript4967.chr6.nic	protein_coding	109440684,109441357,109441552,109442210,109442543,109442752,109442977,109443267,109443517	109441171,109441453,109442067,109442299,109442625,109442884,109443081,109443420,109443919	Gene ID= ENSG00000135587.8 TPM= 4.67 Transcript Type= NA
chr6	109440684	109443919	109440684	109443919	+	transcript4970.chr6.nic@SMPD2	transcript4970.chr6.nic	protein_coding	109440684,109441357,109441552,109442210,109442543,109442977,109443267,109443517	109441171,109441453,109442067,109442299,109442884,109443081,109443420,109443919	Gene ID= ENSG00000135587.8 TPM= 3.5 Transcript Type= NA
chr6	109440763	109443919	109440763	109443919	+	ENST00000258052.7@SMPD2	ENST00000258052.7	protein_coding	109440763,109441357,109441552,109441974,109442210,109442543,109442752,109442977,109443267,109443517	109441171,109441453,109441628,109442067,109442299,109442625,109442884,109443081,109443420,109443919	Gene ID= ENSG00000135587.8 TPM= 16.35 Transcript Type= protein_coding
chr6	109444062	109455728	109444062	109455728	-	transcript4925.chr6.nic@MICAL1	transcript4925.chr6.nic	protein_coding	109455611,109453939,109453638,109453263,109452511,109452246,109451600,109450300,109449970,109449657,109449400,109448732,109448203,109447875,109447681,109447357,109447073,109446696,109446136,109445771,109445416,109445197,109444896,109444725,109444062	109455728,109454239,109453845,109453367,109452615,109452401,109451700,109450557,109450085,109449783,109449481,109448879,109448393,109447963,109447722,109447440,109447229,109446772,109446412,109445862,109445529,109445290,109444995,109444798,109444339	Gene ID= ENSG00000135596.17 TPM= 12.73 Transcript Type= NA
chr6	109444062	109455987	109444062	109455987	-	ENST00000358807.7@MICAL1	ENST00000358807.7	protein_coding	109455719,109453939,109453638,109453263,109452511,109452246,109451600,109450300,109449970,109449657,109449400,109448732,109448203,109447875,109447681,109447357,109447073,109446696,109446136,109445771,109445416,109445197,109444896,109444725,109444062	109455987,109454239,109453845,109453367,109452615,109452401,109451700,109450557,109450085,109449783,109449481,109448879,109448393,109447963,109447722,109447440,109447229,109446772,109446412,109445862,109445529,109445290,109444995,109444798,109444339	Gene ID= ENSG00000135596.17 TPM= 48.92 Transcript Type= protein_coding
chr6	109444062	109455746	109444062	109455746	-	transcript4932.chr6.nnic@MICAL1	transcript4932.chr6.nnic	protein_coding	109455719,109453939,109453638,109453263,109452511,109452246,109451600,109450300,109449970,109449657,109449400,109448732,109448203,109447875,109447681,109447357,109447073,109446696,109446136,109445771,109445416,109445197,109444896,109444725,109444062	109455746,109454239,109453845,109453367,109452615,109452401,109451700,109450557,109450085,109449783,109449481,109448879,109448393,109447963,109447722,109447577,109447229,109446772,109446412,109445862,109445529,109445290,109444995,109444798,109444339	Gene ID= ENSG00000135596.17 TPM= 7.4 Transcript Type= NA
chr6	109444062	109455744	109444062	109455744	-	transcript4934.chr6.nnic@MICAL1	transcript4934.chr6.nnic	protein_coding	109455719,109453939,109453638,109453263,109452511,109452246,109451600,109450300,109449970,109449657,109449400,109448732,109448203,109447875,109447681,109447357,109447073,109446696,109446136,109445771,109445416,109445197,109444896,109444725,109444062	109455744,109454239,109453845,109453367,109452615,109452401,109451700,109450557,109450085,109449783,109449481,109448879,109448393,109447963,109447722,109447440,109447229,109446772,109446412,109445901,109445529,109445290,109444995,109444798,109444339	Gene ID= ENSG00000135596.17 TPM= 6.08 Transcript Type= NA
chr6	109444062	109455771	109444062	109455771	-	transcript4936.chr6.nnic@MICAL1	transcript4936.chr6.nnic	protein_coding	109455719,109453939,109453638,109453263,109452511,109452246,109451600,109450300,109449970,109449657,109449400,109448732,109448203,109447875,109447681,109447357,109447073,109446696,109446136,109445771,109445416,109445197,109444896,109444725,109444062	109455771,109454239,109453845,109453367,109452615,109452401,109451700,109450557,109450085,109449783,109449481,109448879,109448393,109447963,109447722,109447440,109447229,109446772,109446412,109445952,109445529,109445290,109444995,109444798,109444339	Gene ID= ENSG00000135596.17 TPM= 13.09 Transcript Type= NA
chr6	109444062	109455761	109444062	109455761	-	transcript4944.chr6.nic@MICAL1	transcript4944.chr6.nic	protein_coding	109455719,109453939,109453638,109453263,109452511,109451600,109450300,109449970,109449657,109449400,109448732,109448203,109447875,109447681,109447357,109447073,109446696,109446136,109445771,109445416,109445197,109444896,109444725,109444062	109455761,109454239,109453845,109453367,109452615,109452401,109450557,109450085,109449783,109449481,109448879,109448393,109447963,109447722,109447440,109447229,109446772,109446412,109445862,109445529,109445290,109444995,109444798,109444339	Gene ID= ENSG00000135596.17 TPM= 10.98 Transcript Type= NA
chr6	109444062	109455742	109444062	109455742	-	ENST00000358577.7@MICAL1	ENST00000358577.7	protein_coding	109455719,109453939,109453638,109453263,109452511,109452246,109451600,109449970,109449657,109449400,109448732,109448203,109447875,109447681,109447357,109447073,109446696,109446136,109445771,109445416,109445197,109444896,109444725,109444062	109455742,109454239,109453845,109453367,109452615,109452401,109451700,109450085,109449783,109449481,109448879,109448393,109447963,109447722,109447440,109447229,109446772,109446412,109445862,109445529,109445290,109444995,109444798,109444339	Gene ID= ENSG00000135596.17 TPM= 9.34 Transcript Type= protein_coding
chr6	109465578	109483247	109465578	109483247	-	transcript4983.chr6.nnic@ZBTB24	transcript4983.chr6.nnic	protein_coding	109483055,109481075,109476763,109476175,109475399,109467653,109465578	109483247,109482054,109476930,109476258,109475482,109467734,109466574	Gene ID= ENSG00000112365.4 TPM= 4.67 Transcript Type= NA
chr6	109462594	109483266	109462594	109483266	-	transcript4985.chr6.nnic@ZBTB24	transcript4985.chr6.nnic	protein_coding	109483098,109481075,109476175,109475399,109467653,109462594	109483266,109482054,109476258,109475482,109467734,109466574	Gene ID= ENSG00000112365.4 TPM= 3.5 Transcript Type= NA
chr6	109462594	109483237	109462594	109483237	-	ENST00000230122.3@ZBTB24	ENST00000230122.3	protein_coding	109483098,109481075,109476763,109476175,109475399,109467653,109462594	109483237,109482054,109476930,109476258,109475482,109467734,109466574	Gene ID= ENSG00000112365.4 TPM= 8.17 Transcript Type= protein_coding
chr6	109687642	109825428	109687642	109825428	+	transcript4992.chr6.nnic@FIG4	transcript4992.chr6.nnic	protein_coding	109687642,109715078,109716445,109727109,109732637,109735150,109738325,109741444,109743110,109743675,109760250,109762091,109763937,109765013,109766729,109776922,109784970,109786302,109789594,109791376,109792582,109796765,109825088	109687746,109715176,109716568,109727265,109732687,109735298,109738453,109741544,109743272,109743772,109760383,109762207,109763982,109765161,109766895,109777060,109785028,109786449,109789677,109791571,109792664,109796851,109825428	Gene ID= ENSG00000112367.10 TPM= 3.5 Transcript Type= NA
chr6	109691265	109791772	109691265	109791772	+	transcript5001.chr6.nic@FIG4	transcript5001.chr6.nic	protein_coding	109691265,109715078,109716445,109727109,109732637,109735150,109738325,109741444,109743110,109743675,109760250,109762091,109763937,109765013,109766729,109776922,109784970,109786302,109789594,109791376	109691501,109715176,109716568,109727265,109732687,109735298,109738453,109741544,109743272,109743772,109760383,109762207,109763982,109765161,109766895,109777060,109785028,109786449,109789677,109791772	Gene ID= ENSG00000112367.10 TPM= 4.67 Transcript Type= NA
chr6	109691312	109825428	109691312	109825428	+	ENST00000230124.7@FIG4	ENST00000230124.7	protein_coding	109691312,109715078,109716445,109727109,109732637,109735150,109738325,109741444,109743110,109743675,109760250,109762091,109763937,109765013,109766729,109776922,109784970,109786302,109789594,109791376,109792582,109796765,109825088	109691501,109715176,109716568,109727265,109732687,109735298,109738453,109741544,109743272,109743772,109760383,109762207,109763982,109765161,109766895,109777060,109785028,109786449,109789677,109791571,109792664,109796851,109825428	Gene ID= ENSG00000112367.10 TPM= 73.56 Transcript Type= protein_coding
chr6	110180141	110232223	110180141	110232223	+	ENST00000368932.5@CDC40	ENST00000368932.5	protein_coding	110180141,110180384,110193182,110201558,110207506,110209084,110210707,110212133,110213086,110215286,110217702,110219364,110219736,110226167,110228832,110229954	110180180,110180633,110193268,110201687,110207589,110209223,110210803,110212272,110213160,110215331,110217803,110219479,110219869,110226243,110228976,110232223	Gene ID= ENSG00000168438.14 TPM= 23.35 Transcript Type= protein_coding
chr6	110391771	110415562	110391771	110415562	-	ENST00000368924.7@DDO	ENST00000368924.7	protein_coding	110415467,110413291,110408334,110404774,110391771	110415562,110413466,110408442,110404950,110393342	Gene ID= ENSG00000203797.9 TPM= 3.5 Transcript Type= protein_coding
chr6	110391771	110415562	110391771	110415562	-	ENST00000368923.7@DDO	ENST00000368923.7	protein_coding	110415467,110413291,110408334,110391771	110415562,110413466,110408442,110393342	Gene ID= ENSG00000203797.9 TPM= 2.34 Transcript Type= protein_coding
chr6	110609978	110815316	110609978	110815316	-	ENST00000368911.7@CDK19	ENST00000368911.7	protein_coding	110815009,110746126,110670431,110667434,110638649,110632030,110627002,110626776,110623290,110622815,110622088,110621104,110609978	110815316,110746201,110670541,110667574,110638706,110632161,110627145,110626845,110623362,110622912,110622166,110621370,110614666	Gene ID= ENSG00000155111.14 TPM= 4.67 Transcript Type= protein_coding
chr6	110874770	110895713	110874770	110895713	+	ENST00000368885.7@AMD1	ENST00000368885.7	protein_coding	110874770,110887505,110888857,110890254,110892161,110892299,110892735,110892910,110893476	110875215,110887591,110888983,110890356,110892203,110892443,110892827,110893065,110895713	Gene ID= ENSG00000123505.15 TPM= 120.85 Transcript Type= protein_coding
chr6	110874770	110895713	110874770	110895713	+	ENST00000451850.6@AMD1	ENST00000451850.6	protein_coding	110874770,110892161,110892299,110892735,110892910,110893476	110875215,110892203,110892443,110892827,110893065,110895713	Gene ID= ENSG00000123505.15 TPM= 5.25 Transcript Type= nonsense_mediated_decay
chr6	110958928	110967890	110958928	110967890	+	ENST00000480191.1@GTF3C6	ENST00000480191.1	protein_coding	110958928,110959172,110960414,110960572,110962392,110967510	110959042,110959252,110960477,110960616,110962505,110967890	Gene ID= ENSG00000155115.6 TPM= 1.17 Transcript Type= processed_transcript
chr6	110958560	110967890	110958560	110967890	+	ENST00000329970.7@GTF3C6	ENST00000329970.7	protein_coding	110958560,110959172,110960414,110960572,110962392,110967510	110958826,110959252,110960477,110960616,110962505,110967890	Gene ID= ENSG00000155115.6 TPM= 46.7 Transcript Type= protein_coding
chr6	110982015	111026100	110982015	111026100	+	ENST00000441448.6@RPF2	ENST00000441448.6	protein_coding	110982015,110985006,110989028,110991747,110997183,110999711,111008038,111015754,111024183,111025403	110982129,110985138,110989065,110991786,110997264,110999787,111008137,111015856,111024327,111026100	Gene ID= ENSG00000197498.12 TPM= 10.51 Transcript Type= protein_coding
chr6	110982050	111028263	110982050	111028263	+	ENST00000607388.1@RPF2	ENST00000607388.1	protein_coding	110982050,110985006,110991747,110997183,110999711,111008038,111015754,111024183,111025403	110982129,110985138,110991786,110997264,110999787,111008137,111015856,111024327,111028263	Gene ID= ENSG00000197498.12 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr6	111185905	111188259	111185905	111188259	-	transcript5067.chr6.nnic@NA	transcript5067.chr6.nnic	NA	111185905	111188259	Gene ID= novel_gene_chr6_5068 TPM= 2.34 Transcript Type= NA
chr6	111275411	111277096	111275411	111277096	-	transcript5090.chr6.nnic@NA	transcript5090.chr6.nnic	NA	111275411	111277096	Gene ID= novel_gene_chr6_5091 TPM= 2.34 Transcript Type= NA
chr6	111299052	111483715	111299052	111483715	-	ENST00000358835.7@REV3L	ENST00000358835.7	protein_coding	111483599,111482750,111416283,111411480,111405470,111392876,111390086,111389106,111388001,111387765,111381325,111379982,111377701,111372596,111367115,111365265,111363853,111358822,111357014,111351676,111349218,111343925,111335469,111333123,111331676,111329532,111322569,111315267,111313352,111311069,111309853,111307361,111299052	111483715,111483229,111416472,111411554,111405630,111392972,111390180,111389210,111388085,111387913,111381444,111380219,111377843,111376757,111368028,111365344,111363978,111359014,111357125,111351791,111349336,111344043,111335610,111333367,111331784,111329738,111322678,111315381,111313489,111311259,111310099,111307570,111300156	Gene ID= ENSG00000009413.15 TPM= 2.34 Transcript Type= protein_coding
chr6	111480944	111483216	111480944	111483216	-	transcript5092.chr6.nnic@NA	transcript5092.chr6.nnic	NA	111480944	111483216	Gene ID= novel_gene_chr6_5093 TPM= 2.34 Transcript Type= NA
chr6	111558940	111606278	111558940	111606278	-	ENST00000340026.10@TRAF3IP2	ENST00000340026.10	protein_coding	111605776,111601196,111591258,111580197,111575643,111572895,111567624,111566444,111562965,111558940	111606278,111601306,111592094,111580389,111575821,111572983,111567692,111566560,111563039,111559551	Gene ID= ENSG00000056972.18 TPM= 3.5 Transcript Type= protein_coding
chr6	111556454	111606246	111556454	111606246	-	ENST00000368761.9@TRAF3IP2	ENST00000368761.9	protein_coding	111605776,111591258,111580197,111575643,111572895,111567624,111566444,111562965,111556454	111606246,111592094,111580389,111575821,111572983,111567692,111566560,111563039,111559551	Gene ID= ENSG00000056972.18 TPM= 31.53 Transcript Type= protein_coding
chr6	111558940	111605871	111558940	111605871	-	ENST00000359831.8@TRAF3IP2	ENST00000359831.8	protein_coding	111605776,111591258,111580197,111575643,111572895,111567624,111566444,111562965,111558940	111605871,111592094,111580389,111575821,111572983,111567692,111566557,111563039,111559551	Gene ID= ENSG00000056972.18 TPM= 16.35 Transcript Type= protein_coding
chr6	111661286	111873450	111661286	111873450	-	transcript5097.chr6.nic@FYN	transcript5097.chr6.nic	protein_coding	111872968,111846589,111780566,111740981,111719805,111714347,111707922,111703999,111702885,111699515,111696277,111694628,111694375,111674499,111661286	111873450,111846629,111780635,111741093,111720062,111714443,111708020,111704102,111703034,111699670,111696456,111694704,111694528,111674630,111661947	Gene ID= ENSG00000010810.17 TPM= 3.97 Transcript Type= NA
chr6	111661286	111873444	111661286	111873444	-	transcript5099.chr6.nic@FYN	transcript5099.chr6.nic	protein_coding	111872968,111846589,111780566,111740981,111719805,111714347,111707922,111703999,111702885,111700104,111696277,111694628,111694375,111674499,111661286	111873444,111846629,111780635,111741093,111720062,111714443,111708020,111704102,111703034,111700268,111696456,111694704,111694528,111674630,111661947	Gene ID= ENSG00000010810.17 TPM= 4.26 Transcript Type= NA
chr6	111661286	111873476	111661286	111873476	-	transcript5109.chr6.nic@FYN	transcript5109.chr6.nic	protein_coding	111872968,111780566,111719805,111714347,111707922,111703999,111702885,111700104,111696277,111694628,111694375,111674499,111661286	111873476,111780635,111720062,111714443,111708020,111704102,111703034,111700268,111696456,111694704,111694528,111674630,111661947	Gene ID= ENSG00000010810.17 TPM= 13.6 Transcript Type= NA
chr6	111779122	111873673	111779122	111873673	-	transcript5118.chr6.nic@FYN	transcript5118.chr6.nic	protein_coding	111872968,111846589,111779122	111873673,111846629,111780635	Gene ID= ENSG00000010810.17 TPM= 8.17 Transcript Type= NA
chr6	111660332	111873452	111660332	111873452	-	ENST00000354650.7@FYN	ENST00000354650.7	protein_coding	111872968,111846589,111780566,111719805,111714347,111707922,111703999,111702885,111700104,111696277,111694628,111694375,111674499,111660332	111873452,111846629,111780635,111720062,111714443,111708020,111704102,111703034,111700268,111696456,111694704,111694528,111674630,111661947	Gene ID= ENSG00000010810.17 TPM= 12.84 Transcript Type= protein_coding
chr6	112070777	112087537	112070777	112087537	-	transcript5126.chr6.nnic@TUBE1	transcript5126.chr6.nnic	protein_coding	112087410,112087233,112086556,112084189,112081092,112079633,112076322,112074710,112072758,112071902,112070777	112087537,112087306,112086608,112084246,112081207,112079754,112076509,112074850,112072898,112072076,112071570	Gene ID= ENSG00000074935.13 TPM= 2.34 Transcript Type= NA
chr6	112070777	112087537	112070777	112087537	-	transcript5127.chr6.nic@TUBE1	transcript5127.chr6.nic	protein_coding	112087410,112087233,112086556,112084189,112081092,112075937,112074710,112072758,112071902,112070777	112087537,112087306,112086608,112084246,112081207,112079754,112074850,112072898,112072076,112071570	Gene ID= ENSG00000074935.13 TPM= 4.67 Transcript Type= NA
chr6	112070777	112087513	112070777	112087513	-	ENST00000368662.9@TUBE1	ENST00000368662.9	protein_coding	112087410,112087233,112086556,112084189,112081092,112079633,112076322,112075937,112074710,112072758,112071902,112070777	112087513,112087306,112086608,112084246,112081207,112079754,112076509,112076112,112074850,112072898,112072076,112071570	Gene ID= ENSG00000074935.13 TPM= 12.84 Transcript Type= protein_coding
chr6	112087638	112100895	112087638	112100895	+	ENST00000604268.1@FAM229B	ENST00000604268.1	protein_coding	112087638,112097041,112099270,112100670	112087709,112097201,112099408,112100895	Gene ID= ENSG00000203778.7 TPM= 4.67 Transcript Type= protein_coding
chr6	112106079	112107800	112106079	112107800	-	transcript5157.chr6.nnic@NA	transcript5157.chr6.nnic	NA	112106079	112107800	Gene ID= novel_gene_chr6_5158 TPM= 8.17 Transcript Type= NA
chr6	112108860	112254710	112108860	112254710	-	ENST00000522006.5@LAMA4	ENST00000522006.5	protein_coding	112254442,112253956,112216368,112207021,112201608,112191636,112189131,112187450,112185237,112178121,112175313,112172611,112165160,112158732,112155565,112154851,112150511,112148157,112144794,112142119,112141358,112140760,112139752,112139120,112136123,112134467,112133349,112132753,112130968,112129876,112128922,112122014,112120283,112119156,112117739,112115863,112114663,112114076,112108860	112254710,112254291,112216469,112207145,112201688,112191850,112189205,112187601,112185347,112178232,112175480,112172804,112165276,112158880,112155706,112154947,112150627,112148336,112144933,112142292,112141503,112140922,112139885,112139291,112136254,112134609,112133487,112132890,112131101,112130040,112129075,112122201,112120472,112119311,112117898,112115993,112114756,112114195,112109582	Gene ID= ENSG00000112769.18 TPM= 3.5 Transcript Type= protein_coding
chr6	112109133	112254547	112109133	112254547	-	transcript5138.chr6.nnic@LAMA4	transcript5138.chr6.nnic	protein_coding	112254459,112253956,112216368,112207021,112201608,112191636,112189149,112187450,112185237,112178121,112175313,112172611,112165160,112158732,112155565,112154851,112150511,112148157,112144794,112142119,112141358,112140760,112139752,112139120,112136123,112134467,112133349,112132753,112130968,112129876,112128922,112122014,112120283,112119156,112117739,112115863,112114663,112114076,112109133	112254547,112254291,112216469,112207145,112201688,112191850,112189205,112187601,112185347,112178232,112175480,112172804,112165276,112158880,112155706,112154947,112150627,112148336,112144933,112142292,112141503,112140922,112139885,112139291,112136254,112134609,112133487,112132890,112131101,112130040,112129075,112122201,112120472,112119311,112117898,112115993,112114756,112114195,112109582	Gene ID= ENSG00000112769.18 TPM= 2.34 Transcript Type= NA
chr6	112134530	112254567	112134530	112254567	-	transcript5142.chr6.nnic@LAMA4	transcript5142.chr6.nnic	protein_coding	112253956,112216368,112207021,112201608,112191636,112189098,112187450,112185237,112178121,112175313,112172611,112165160,112158732,112155565,112154851,112150511,112148157,112144794,112142119,112141358,112140760,112139752,112139120,112136123,112134530	112254567,112216469,112207145,112201688,112191850,112189205,112187601,112185347,112178232,112175480,112172804,112165276,112158880,112155706,112154947,112150627,112148336,112144933,112142292,112141503,112140922,112139885,112139291,112136254,112134609	Gene ID= ENSG00000112769.18 TPM= 3.5 Transcript Type= NA
chr6	112108874	112254600	112108874	112254600	-	ENST00000389463.8@LAMA4	ENST00000389463.8	protein_coding	112254459,112253956,112216368,112207021,112201608,112191636,112189131,112187450,112185237,112178121,112175313,112172611,112165160,112158732,112155565,112154851,112150511,112148157,112144794,112142119,112141358,112140760,112139752,112139120,112136123,112134467,112133349,112132753,112130968,112129876,112128922,112122014,112120283,112119156,112117739,112115863,112114663,112114076,112108874	112254600,112254291,112216469,112207145,112201688,112191850,112189205,112187601,112185347,112178232,112175480,112172804,112165276,112158880,112155706,112154947,112150627,112148336,112144933,112142292,112141503,112140922,112139885,112139291,112136254,112134609,112133487,112132890,112131101,112130040,112129075,112122201,112120472,112119311,112117898,112115993,112114756,112114195,112109582	Gene ID= ENSG00000112769.18 TPM= 3.5 Transcript Type= protein_coding
chr6	112253784	112254578	112253784	112254578	-	ENST00000453937.2@LAMA4	ENST00000453937.2	protein_coding	112254442,112253784	112254578,112254291	Gene ID= ENSG00000112769.18 TPM= 4.67 Transcript Type= protein_coding
chr6	113857362	113863471	113857362	113863471	+	ENST00000612661.1@MARCKS	ENST00000612661.1	protein_coding	113857362,113859683	113857847,113863471	Gene ID= ENSG00000277443.2 TPM= 72.39 Transcript Type= protein_coding
chr6	113868013	113873381	113868013	113873381	-	transcript5168.chr6.nnic@LINC01268	transcript5168.chr6.nnic	lincRNA	113872994,113870669,113870304,113870021,113868013	113873381,113870734,113870343,113870187,113869604	Gene ID= ENSG00000227502.2 TPM= 2.34 Transcript Type= NA
chr6	113904138	113921642	113904138	113921642	+	ENST00000314481.3@FO393415.1	ENST00000314481.3	antisense_RNA	113904138,113916943,113919107,113920456	113904744,113917052,113919457,113921642	Gene ID= ENSG00000175967.3 TPM= 2.34 Transcript Type= antisense_RNA
chr6	113943351	113971171	113943351	113971171	-	transcript5183.chr6.nic@HDAC2	transcript5183.chr6.nic	protein_coding	113970857,113959906,113958649,113956619,113956013,113953277,113949168,113948979,113946008,113945362,113944280,113943351	113971171,113960018,113958766,113956693,113956151,113953418,113949260,113949087,113946148,113945470,113944410,113943506	Gene ID= ENSG00000196591.11 TPM= 3.5 Transcript Type= NA
chr6	113940718	113971157	113940718	113971157	-	ENST00000368632.6@HDAC2	ENST00000368632.6	protein_coding	113970857,113962367,113959906,113958649,113956619,113956013,113953277,113949168,113948979,113946008,113945362,113944280,113943351,113941708,113940718	113971157,113962394,113960018,113958766,113956693,113956151,113953418,113949260,113949087,113946148,113945470,113944410,113943506,113941765,113941088	Gene ID= ENSG00000196591.11 TPM= 119.09 Transcript Type= protein_coding
chr6	115933145	115937005	115933145	115937005	-	transcript5186.chr6.nnic@NA	transcript5186.chr6.nnic	NA	115933145	115937005	Gene ID= novel_gene_chr6_5187 TPM= 2.34 Transcript Type= NA
chr6	116100817	116118697	116100817	116118697	+	transcript5200.chr6.nic@NT5DC1	transcript5200.chr6.nic	protein_coding	116100817,116106244,116108364,116110850,116115691,116117861	116101023,116106335,116108435,116110956,116115770,116118697	Gene ID= ENSG00000178425.13 TPM= 2.34 Transcript Type= NA
chr6	116100849	116249497	116100849	116249497	+	ENST00000319550.8@NT5DC1	ENST00000319550.8	protein_coding	116100849,116106244,116108364,116110850,116115691,116117861,116221054,116223034,116236966,116238187,116238955,116243909	116101023,116106335,116108435,116110956,116115770,116117945,116221228,116223131,116237084,116238348,116239123,116249497	Gene ID= ENSG00000178425.13 TPM= 3.5 Transcript Type= protein_coding
chr6	116249961	116254140	116249961	116254140	-	ENST00000420283.2@TSPYL4	ENST00000420283.2	protein_coding	116249961	116254140	Gene ID= ENSG00000187189.10 TPM= 8.17 Transcript Type= protein_coding
chr6	116370947	116438277	116370947	116438277	+	ENST00000359564.2@DSE	ENST00000359564.2	protein_coding	116370947,116399198,116426574,116430954,116433343,116435587	116371121,116399666,116426827,116431193,116433550,116438277	Gene ID= ENSG00000111817.16 TPM= 30.36 Transcript Type= protein_coding
chr6	116276578	116279903	116276578	116279903	-	ENST00000368608.3@TSPYL1	ENST00000368608.3	protein_coding	116276578	116279903	Gene ID= ENSG00000189241.6 TPM= 57.21 Transcript Type= protein_coding
chr6	116461393	116463779	116461393	116463779	+	ENST00000368605.2@FAM26F	ENST00000368605.2	protein_coding	116461393,116461872,116463283	116461429,116462454,116463779	Gene ID= ENSG00000188820.12 TPM= 5.84 Transcript Type= protein_coding
chr6	116494989	116512343	116494989	116512343	-	ENST00000356128.4@TRAPPC3L	ENST00000356128.4	protein_coding	116512194,116500481,116494989	116512343,116500666,116497073	Gene ID= ENSG00000173626.9 TPM= 1.17 Transcript Type= protein_coding
chr6	116571527	116593268	116571527	116593268	+	transcript5220.chr6.nic@RWDD1	transcript5220.chr6.nic	protein_coding	116571527,116572858,116574058,116580295,116584727,116588842,116590272,116590888,116592980	116571655,116572985,116574171,116580360,116584857,116588985,116590404,116590950,116593268	Gene ID= ENSG00000111832.12 TPM= 2.34 Transcript Type= NA
chr6	116571367	116597675	116571367	116597675	+	ENST00000466444.6@RWDD1	ENST00000466444.6	protein_coding	116571367,116580295,116584727,116588842,116590272,116590888,116592980	116571655,116580360,116584857,116588985,116590404,116590950,116597675	Gene ID= ENSG00000111832.12 TPM= 45.54 Transcript Type= protein_coding
chr6	116635618	116668794	116635618	116668794	-	ENST00000368576.7@ZUFSP	ENST00000368576.7	protein_coding	116668566,116666634,116660736,116658803,116656684,116652004,116651572,116647459,116645714,116635618	116668794,116667207,116660846,116658924,116656852,116652192,116651737,116647610,116645934,116635879	Gene ID= ENSG00000153975.9 TPM= 8.17 Transcript Type= protein_coding
chr6	116752197	116765696	116752197	116765696	-	transcript5247.chr6.nnic@FAM162B	transcript5247.chr6.nnic	protein_coding	116765405,116761977,116752197	116765696,116762085,116752695	Gene ID= ENSG00000183807.7 TPM= 2.34 Transcript Type= NA
chr6	116752197	116765723	116752197	116765723	-	ENST00000368557.5@FAM162B	ENST00000368557.5	protein_coding	116765405,116765147,116761977,116752197	116765723,116765255,116762085,116752695	Gene ID= ENSG00000183807.7 TPM= 10.51 Transcript Type= protein_coding
chr6	117341026	117425781	117341026	117425781	-	transcript5254.chr6.nic@ROS1	transcript5254.chr6.nic	protein_coding	117425534,117418462,117416258,117414519,117409582,117404280,117403139,117396915,117396188,117394616,117394162,117393224,117389350,117387780,117386889,117385683,117383317,117379059,117366076,117365581,117365060,117362603,117360342,117359809,117357804,117356629,117352990,117344060,117342400,117341400,117341026	117425781,117418506,117416317,117414545,117409642,117404428,117403277,117397116,117396264,117394738,117394346,117393321,117389846,117387992,117386999,117385861,117383508,117379159,117366290,117365741,117365204,117362865,117360405,117360011,117358009,117356915,117353169,117344262,117342544,117341632,117341311	Gene ID= ENSG00000047936.10 TPM= 4.38 Transcript Type= NA
chr6	117350688	117425781	117350688	117425781	-	transcript5258.chr6.nnic@ROS1	transcript5258.chr6.nnic	protein_coding	117425534,117418462,117416258,117414519,117409582,117404280,117403139,117396915,117396188,117394616,117394162,117393224,117389350,117387780,117386889,117385683,117383317,117379059,117366076,117365581,117365060,117362603,117360342,117359809,117357804,117356629,117352990,117350688	117425781,117418506,117416317,117414545,117409642,117404428,117403277,117397116,117396264,117394738,117394346,117393321,117389846,117387992,117386999,117385861,117383508,117379159,117366290,117365741,117365204,117362865,117360405,117360011,117358009,117356915,117353169,117351424	Gene ID= ENSG00000047936.10 TPM= 12.55 Transcript Type= NA
chr6	117348599	117425781	117348599	117425781	-	transcript5260.chr6.nnic@ROS1	transcript5260.chr6.nnic	protein_coding	117425534,117418462,117416258,117414519,117409582,117404280,117403139,117396915,117396188,117394616,117394162,117393224,117389350,117387780,117386889,117385683,117383317,117379059,117366076,117365581,117365060,117362603,117360342,117359809,117357804,117356629,117348599	117425781,117418506,117416317,117414545,117409642,117404428,117403277,117397116,117396264,117394738,117394346,117393321,117389846,117387992,117386999,117385861,117383508,117379159,117366290,117365741,117365204,117362865,117360405,117360011,117358009,117356915,117351424	Gene ID= ENSG00000047936.10 TPM= 6.71 Transcript Type= NA
chr6	117350688	117425781	117350688	117425781	-	transcript5262.chr6.nic@ROS1	transcript5262.chr6.nic	protein_coding	117425534,117418462,117416258,117414519,117409582,117404280,117403139,117396915,117396188,117394616,117394162,117393224,117389350,117387780,117386889,117385683,117383317,117379059,117366076,117365581,117365060,117362603,117360342,117359809,117357804,117356629,117350688	117425781,117418506,117416317,117414545,117409642,117404428,117403277,117397116,117396264,117394738,117394346,117393321,117389846,117387992,117386999,117385861,117383508,117379159,117366290,117365741,117365204,117362865,117360405,117360011,117358009,117356915,117353169	Gene ID= ENSG00000047936.10 TPM= 5.55 Transcript Type= NA
chr6	117395477	117398695	117395477	117398695	+	transcript5272.chr6.nnic@NA	transcript5272.chr6.nnic	NA	117395477	117398695	Gene ID= novel_gene_chr6_5273 TPM= 19.85 Transcript Type= NA
chr6	117482641	117549797	117482641	117549797	+	transcript5274.chr6.nic@DCBLD1	transcript5274.chr6.nic	protein_coding	117482641,117484950,117503767,117519816,117521525,117525362,117532260,117537185,117538620,117539255,117540668,117540918,117543124,117544528,117545478,117547907	117482893,117485040,117503979,117519950,117521576,117525434,117532393,117537225,117538835,117539379,117540815,117541025,117543211,117544577,117545597,117549797	Gene ID= ENSG00000164465.18 TPM= 2.34 Transcript Type= NA
chr6	117482624	117549797	117482624	117549797	+	transcript5280.chr6.nic@DCBLD1	transcript5280.chr6.nic	protein_coding	117482624,117503767,117519816,117521525,117525362,117532260,117537185,117538620,117539255,117540668,117540918,117544528,117545478,117547907	117482893,117503979,117519950,117521576,117525434,117532393,117537225,117538835,117539379,117540815,117541025,117544577,117545597,117549797	Gene ID= ENSG00000164465.18 TPM= 7.01 Transcript Type= NA
chr6	117482662	117549797	117482662	117549797	+	ENST00000338728.9@DCBLD1	ENST00000338728.9	protein_coding	117482662,117503767,117519816,117521525,117525362,117532260,117537185,117538620,117539255,117540668,117540918,117543124,117544528,117545478,117547907	117482893,117503979,117519950,117521576,117525434,117532393,117537225,117538835,117539379,117540815,117541025,117543211,117544577,117545597,117549797	Gene ID= ENSG00000164465.18 TPM= 39.11 Transcript Type= protein_coding
chr6	117482657	117569858	117482657	117569858	+	ENST00000296955.12@DCBLD1	ENST00000296955.12	protein_coding	117482657,117503767,117519816,117521525,117525362,117532260,117537185,117538620,117539255,117540668,117540918,117543124,117544528,117545478,117569620	117482893,117503979,117519950,117521576,117525434,117532393,117537225,117538835,117539379,117540815,117541025,117543211,117544577,117545597,117569858	Gene ID= ENSG00000164465.18 TPM= 4.09 Transcript Type= protein_coding
chr6	117561684	117602545	117561684	117602545	-	transcript5292.chr6.nic@GOPC	transcript5292.chr6.nic	protein_coding	117602004,117578900,117575177,117573467,117569572,117566854,117561684	117602545,117579064,117575352,117573632,117570955,117567034,117563384	Gene ID= ENSG00000047932.13 TPM= 2.34 Transcript Type= NA
chr6	117560269	117602528	117560269	117602528	-	ENST00000052569.10@GOPC	ENST00000052569.10	protein_coding	117602004,117578900,117575177,117573467,117570860,117569572,117566854,117560269	117602528,117579064,117575352,117573632,117570955,117569736,117567034,117563384	Gene ID= ENSG00000047932.13 TPM= 28.02 Transcript Type= protein_coding
chr6	117675481	117708588	117675481	117708588	+	transcript5297.chr6.nnic@NUS1	transcript5297.chr6.nnic	protein_coding	117675481,117689751,117693042,117694031,117703605,117706925	117676085,117689843,117693167,117694180,117703704,117708588	Gene ID= ENSG00000153989.7 TPM= 2.34 Transcript Type= NA
chr6	117675502	117710640	117675502	117710640	+	ENST00000368494.3@NUS1	ENST00000368494.3	protein_coding	117675502,117693042,117694031,117703605,117706925	117676085,117693167,117694180,117703704,117710640	Gene ID= ENSG00000153989.7 TPM= 17.51 Transcript Type= protein_coding
chr6	118460772	118651891	118460772	118651891	-	ENST00000368491.7@CEP85L	ENST00000368491.7	protein_coding	118651197,118632453,118565529,118523802,118511298,118491686,118483706,118481779,118480396,118479871,118470537,118469072,118460772	118651891,118632611,118566316,118523920,118511415,118491865,118483858,118481933,118480513,118479921,118470644,118469303,118465568	Gene ID= ENSG00000111860.13 TPM= 3.5 Transcript Type= protein_coding
chr6	118548298	118560730	118548298	118560730	+	ENST00000357525.5@PLN	ENST00000357525.5	protein_coding	118548298,118558825	118548392,118560730	Gene ID= ENSG00000198523.5 TPM= 1.17 Transcript Type= protein_coding
chr6	118910597	118935129	118910597	118935129	-	transcript5322.chr6.nic@MCM9	transcript5322.chr6.nic	protein_coding	118934891,118932607,118931420,118923811,118922005,118917561,118913295,118910597	118935129,118932740,118931738,118924127,118922086,118917761,118913420,118911769	Gene ID= ENSG00000111877.17 TPM= 2.34 Transcript Type= NA
chr6	118813449	118895157	118813449	118895157	-	transcript5326.chr6.nic@MCM9	transcript5326.chr6.nic	protein_coding	118894027,118829048,118827927,118826782,118826147,118813449	118895157,118829250,118828130,118826864,118826292,118816294	Gene ID= ENSG00000111877.17 TPM= 2.34 Transcript Type= NA
chr6	118813442	118935162	118813442	118935162	-	ENST00000316316.10@MCM9	ENST00000316316.10	protein_coding	118934891,118931420,118923811,118922005,118917561,118913295,118911650,118856371,118829048,118827927,118826782,118826147,118813442	118935162,118931738,118924127,118922086,118917761,118913420,118911769,118856545,118829250,118828130,118826864,118826292,118816294	Gene ID= ENSG00000111877.17 TPM= 7.01 Transcript Type= protein_coding
chr6	118910597	118935114	118910597	118935114	-	ENST00000316068.7@MCM9	ENST00000316068.7	protein_coding	118934891,118931420,118923811,118922005,118917561,118913295,118910597	118935114,118931738,118924127,118922086,118917761,118913420,118911769	Gene ID= ENSG00000111877.17 TPM= 2.34 Transcript Type= protein_coding
chr6	118894220	118909167	118894220	118909167	+	ENST00000229595.5@ASF1A	ENST00000229595.5	protein_coding	118894220,118900766,118905652,118907402	118894522,118900881,118905828,118909167	Gene ID= ENSG00000111875.7 TPM= 32.69 Transcript Type= protein_coding
chr6	118959830	119078751	118959830	119078751	-	transcript5310.chr6.nic@FAM184A	transcript5310.chr6.nic	protein_coding	119078141,119023959,119022945,119019978,119016747,119011309,119006447,119003501,119002899,118980138,118979365,118975917,118975024,118974428,118966835,118964667,118961761,118960769,118959830	119078751,119024813,119023080,119020159,119016944,119011431,119006608,119003622,119003049,118980350,118979518,118976044,118975208,118974574,118966952,118964771,118961963,118960863,118960184	Gene ID= ENSG00000111879.18 TPM= 2.34 Transcript Type= NA
chr6	118959829	119078743	118959829	119078743	-	ENST00000338891.11@FAM184A	ENST00000338891.11	protein_coding	119078141,119023959,119022945,119019978,119016747,119011309,119006447,119003501,119002899,118980138,118979365,118975917,118975024,118974428,118966835,118964667,118961761,118959829	119078743,119024813,119023080,119020159,119016944,119011431,119006608,119003622,119003049,118980350,118979518,118976044,118975208,118974574,118966952,118964771,118961963,118960184	Gene ID= ENSG00000111879.18 TPM= 15.18 Transcript Type= protein_coding
chr6	119177209	119350645	119177209	119350645	-	transcript5336.chr6.nnic@MAN1A1	transcript5336.chr6.nnic	protein_coding	119350527,119348463,119306896,119301988,119290683,119248260,119204759,119201254,119193777,119189664,119188405,119180312,119177209	119350645,119349287,119306992,119302103,119290763,119248354,119204882,119201347,119193892,119189883,119188577,119180427,119179945	Gene ID= ENSG00000111885.6 TPM= 11.68 Transcript Type= NA
chr6	119177209	119349797	119177209	119349797	-	transcript5341.chr6.nic@MAN1A1	transcript5341.chr6.nic	protein_coding	119348463,119306896,119301988,119290683,119248260,119204759,119201254,119193777,119189664,119188405,119180312,119177209	119349797,119306992,119302103,119290763,119248354,119204882,119201347,119193892,119189883,119188577,119180427,119179945	Gene ID= ENSG00000111885.6 TPM= 33.86 Transcript Type= NA
chr6	119177209	119349761	119177209	119349761	-	ENST00000368468.3@MAN1A1	ENST00000368468.3	protein_coding	119349542,119348463,119306896,119301988,119290683,119248260,119204759,119201254,119193777,119189664,119188405,119180312,119177209	119349761,119349287,119306992,119302103,119290763,119248354,119204882,119201347,119193892,119189883,119188577,119180427,119179945	Gene ID= ENSG00000111885.6 TPM= 100.41 Transcript Type= protein_coding
chr6	121435692	121449727	121435692	121449727	+	ENST00000282561.3@GJA1	ENST00000282561.3	protein_coding	121435692,121446832	121435832,121449727	Gene ID= ENSG00000152661.7 TPM= 23.35 Transcript Type= protein_coding
chr6	122399546	122432966	122399546	122432966	+	ENST00000368455.8@HSF2	ENST00000368455.8	protein_coding	122399546,122412373,122412637,122413525,122416221,122419168,122420135,122422150,122422718,122423581,122427903,122431430,122431925	122399830,122412481,122412764,122413649,122416296,122419229,122420222,122422298,122422957,122423686,122427956,122431514,122432966	Gene ID= ENSG00000025156.12 TPM= 9.34 Transcript Type= protein_coding
chr6	122399551	122433119	122399551	122433119	+	ENST00000452194.5@HSF2	ENST00000452194.5	protein_coding	122399551,122412373,122412637,122413525,122416221,122419168,122420135,122422150,122422718,122423581,122431430,122431925	122399830,122412481,122412764,122413649,122416296,122419229,122420222,122422298,122422957,122423686,122431514,122433119	Gene ID= ENSG00000025156.12 TPM= 11.68 Transcript Type= protein_coding
chr6	122437380	122441346	122437380	122441346	+	transcript5360.chr6.nnic@NA	transcript5360.chr6.nnic	NA	122437380	122441346	Gene ID= novel_gene_chr6_5361 TPM= 35.03 Transcript Type= NA
chr6	122443354	122471822	122443354	122471822	-	ENST00000339697.4@SERINC1	ENST00000339697.4	protein_coding	122471699,122458520,122456481,122454151,122453770,122451888,122451664,122447121,122446774,122443354	122471822,122458681,122456650,122454230,122453907,122452057,122451754,122447265,122447004,122445179	Gene ID= ENSG00000111897.6 TPM= 546.43 Transcript Type= protein_coding
chr6	122717561	122725892	122717561	122725892	+	ENST00000354275.2@PKIB	ENST00000354275.2	protein_coding	122717561,122717787,122725128	122717661,122717963,122725892	Gene ID= ENSG00000135549.14 TPM= 2.34 Transcript Type= protein_coding
chr6	122789049	122809717	122789049	122809717	+	ENST00000539041.5@SMPDL3A	ENST00000539041.5	protein_coding	122789049,122796824,122801310,122803664,122804909,122806233,122809091	122789458,122796968,122801406,122803833,122805089,122806357,122809717	Gene ID= ENSG00000172594.12 TPM= 11.68 Transcript Type= protein_coding
chr6	122789288	122809720	122789288	122809720	+	transcript5371.chr6.nnic@SMPDL3A	transcript5371.chr6.nnic	protein_coding	122789288,122796824,122801310,122804909,122806233,122809091	122789458,122796968,122801406,122805089,122806357,122809720	Gene ID= ENSG00000172594.12 TPM= 2.34 Transcript Type= NA
chr6	122789157	122809720	122789157	122809720	+	transcript5372.chr6.nnic@SMPDL3A	transcript5372.chr6.nnic	protein_coding	122789157,122796824,122803664,122804909,122806233,122809091	122789458,122796968,122803833,122805089,122806357,122809720	Gene ID= ENSG00000172594.12 TPM= 3.5 Transcript Type= NA
chr6	122789258	122809720	122789258	122809720	+	transcript5373.chr6.nnic@SMPDL3A	transcript5373.chr6.nnic	protein_coding	122789258,122796824,122804909,122806233,122809091	122789458,122796968,122805089,122806357,122809720	Gene ID= ENSG00000172594.12 TPM= 2.34 Transcript Type= NA
chr6	124961927	125085609	124961927	125085609	+	transcript5375.chr6.nic@RNF217	transcript5375.chr6.nic	protein_coding	124961927,124971478,125045211,125057942,125076657,125081436,125082864	124963426,124971598,125045444,125058106,125076858,125081507,125085609	Gene ID= ENSG00000146373.16 TPM= 4.67 Transcript Type= NA
chr6	124962064	124965619	124962064	124965619	+	transcript5387.chr6.nnic@NA	transcript5387.chr6.nnic	NA	124962064	124965619	Gene ID= novel_gene_chr6_5388 TPM= 2.34 Transcript Type= NA
chr6	125153649	125263497	125153649	125263497	+	ENST00000304877.17@TPD52L1	ENST00000304877.17	protein_coding	125153649,125220078,125229118,125248282,125252022,125253717,125257098,125262834	125153970,125220193,125229266,125248383,125252036,125253755,125257158,125263497	Gene ID= ENSG00000111907.20 TPM= 8.76 Transcript Type= protein_coding
chr6	125153733	125263497	125153733	125263497	+	ENST00000368402.9@TPD52L1	ENST00000368402.9	protein_coding	125153733,125220078,125229118,125248282,125253717,125262834	125153970,125220193,125229266,125248383,125253755,125263497	Gene ID= ENSG00000111907.20 TPM= 6.42 Transcript Type= protein_coding
chr6	125275882	125302127	125275882	125302127	-	transcript5396.chr6.nnic@HDDC2	transcript5396.chr6.nnic	protein_coding	125302033,125300538,125298714,125292841,125277102,125275882	125302127,125300659,125298816,125292909,125277240,125276243	Gene ID= ENSG00000111906.17 TPM= 5.06 Transcript Type= NA
chr6	125275882	125302127	125275882	125302127	-	transcript5399.chr6.nnic@HDDC2	transcript5399.chr6.nnic	protein_coding	125302033,125300538,125292841,125277102,125275882	125302127,125300659,125292909,125277240,125276243	Gene ID= ENSG00000111906.17 TPM= 3.89 Transcript Type= NA
chr6	125275886	125301975	125275886	125301975	-	ENST00000398153.6@HDDC2	ENST00000398153.6	protein_coding	125301849,125300538,125298714,125292841,125277102,125275886	125301975,125300659,125298816,125292909,125277240,125276243	Gene ID= ENSG00000111906.17 TPM= 19.07 Transcript Type= protein_coding
chr6	125749580	125761269	125749580	125761269	+	ENST00000368364.3@HEY2	ENST00000368364.3	protein_coding	125749580,125751801,125752007,125754465,125759117	125749859,125751879,125752090,125754546,125761269	Gene ID= ENSG00000135547.8 TPM= 7.01 Transcript Type= protein_coding
chr6	125759642	125765861	125759642	125765861	+	transcript5406.chr6.nnic@NA	transcript5406.chr6.nnic	NA	125759642	125765861	Gene ID= novel_gene_chr6_5407 TPM= 2.34 Transcript Type= NA
chr6	125790960	125931111	125790960	125931111	+	transcript5409.chr6.nic@NCOA7	transcript5409.chr6.nic	protein_coding	125790960,125796680,125815291,125855020,125874889,125878263,125881090,125882426,125885159,125888972,125890642,125915333,125920943,125922682,125927663,125928174,125928636	125791067,125796797,125815404,125855240,125874968,125878370,125881203,125882551,125885343,125889981,125890810,125915480,125921068,125922834,125927758,125928247,125931111	Gene ID= ENSG00000111912.19 TPM= 3.89 Transcript Type= NA
chr6	125790495	125931111	125790495	125931111	+	transcript5411.chr6.nic@NCOA7	transcript5411.chr6.nic	protein_coding	125790495,125815291,125855020,125874889,125878263,125881090,125882426,125885159,125888972,125890642,125915333,125920943,125922682,125927663,125928174,125928636	125791067,125815404,125855240,125874968,125878370,125881203,125882551,125885343,125889981,125890810,125915480,125921068,125922834,125927758,125928247,125931111	Gene ID= ENSG00000111912.19 TPM= 5.06 Transcript Type= NA
chr6	125919224	125931111	125919224	125931111	+	ENST00000438495.6@NCOA7	ENST00000438495.6	protein_coding	125919224,125920943,125922682,125927663,125928174,125928636	125919431,125921068,125922834,125927758,125928247,125931111	Gene ID= ENSG00000111912.19 TPM= 24.9 Transcript Type= protein_coding
chr6	125956730	125980205	125956730	125980205	+	transcript5420.chr6.nnic@HINT3	transcript5420.chr6.nnic	protein_coding	125956730,125966887,125972259,125974847,125977644,125979926	125957178,125967004,125972328,125974973,125978432,125980205	Gene ID= ENSG00000111911.6 TPM= 2.34 Transcript Type= NA
chr6	125956781	125980244	125956781	125980244	+	ENST00000229633.6@HINT3	ENST00000229633.6	protein_coding	125956781,125966887,125972259,125974847,125977644	125957178,125967004,125972328,125974973,125980244	Gene ID= ENSG00000111911.6 TPM= 22.18 Transcript Type= protein_coding
chr6	125986538	126039276	125986538	126039276	+	transcript5427.chr6.nic@TRMT11	transcript5427.chr6.nic	protein_coding	125986538,125993757,125995967,125998053,125998223,125998550,125999457,126008392,126011253,126012771,126012970,126021160,126038705	125986773,125993822,125996040,125998134,125998315,125998684,125999613,126008472,126011417,126012852,126013101,126021280,126039276	Gene ID= ENSG00000066651.18 TPM= 2.34 Transcript Type= NA
chr6	125986479	126039276	125986479	126039276	+	ENST00000368332.7@TRMT11	ENST00000368332.7	protein_coding	125986479,125993757,125995967,125998053,125998223,125998550,125999457,126008392,126011253,126012771,126012970,126021160,126038705	125986622,125993822,125996040,125998134,125998315,125998684,125999613,126008472,126011417,126012852,126013101,126021265,126039276	Gene ID= ENSG00000066651.18 TPM= 17.51 Transcript Type= protein_coding
chr6	126340174	126348608	126340174	126348608	+	ENST00000368325.5@CENPW	ENST00000368325.5	protein_coding	126340174,126346205,126348466	126340444,126346318,126348608	Gene ID= ENSG00000203760.8 TPM= 1.17 Transcript Type= protein_coding
chr6	127118604	127197296	127118604	127197296	+	ENST00000356698.8@RSPO3	ENST00000356698.8	protein_coding	127118604,127148648,127150426,127155241,127195823	127119289,127148839,127150572,127155438,127197296	Gene ID= ENSG00000146374.13 TPM= 1.17 Transcript Type= protein_coding
chr6	127266832	127288362	127266832	127288362	+	transcript5454.chr6.nic@RNF146	transcript5454.chr6.nic	protein_coding	127266832,127280231,127282287,127286050,127286616	127266925,127280340,127282395,127286177,127288362	Gene ID= ENSG00000118518.15 TPM= 4.67 Transcript Type= NA
chr6	127266610	127288558	127266610	127288558	+	ENST00000368314.5@RNF146	ENST00000368314.5	protein_coding	127266610,127280231,127286616	127266925,127280340,127288558	Gene ID= ENSG00000118518.15 TPM= 1.17 Transcript Type= protein_coding
chr6	127266883	127288362	127266883	127288362	+	ENST00000610153.1@RNF146	ENST00000610153.1	protein_coding	127266883,127280231,127286616	127267095,127280340,127288362	Gene ID= ENSG00000118518.15 TPM= 7.01 Transcript Type= protein_coding
chr6	127266885	127270066	127266885	127270066	+	transcript5475.chr6.nnic@NA	transcript5475.chr6.nnic	NA	127266885	127270066	Gene ID= novel_gene_chr6_5476 TPM= 2.34 Transcript Type= NA
chr6	127288712	127343580	127288712	127343580	-	transcript5444.chr6.nic@ECHDC1	transcript5444.chr6.nic	protein_coding	127343336,127330809,127329822,127327002,127316450,127314816,127288712	127343580,127331030,127329882,127327144,127316502,127314896,127290277	Gene ID= ENSG00000093144.18 TPM= 4.44 Transcript Type= NA
chr6	127288712	127342875	127288712	127342875	-	ENST00000531967.5@ECHDC1	ENST00000531967.5	protein_coding	127342356,127330809,127327002,127316450,127314816,127288712	127342875,127331030,127327144,127316502,127314896,127290277	Gene ID= ENSG00000093144.18 TPM= 13.39 Transcript Type= protein_coding
chr6	127288710	127343609	127288710	127343609	-	ENST00000454859.7@ECHDC1	ENST00000454859.7	protein_coding	127343336,127330809,127327002,127316450,127314816,127288710	127343609,127331030,127327144,127316502,127314896,127290277	Gene ID= ENSG00000093144.18 TPM= 78.78 Transcript Type= protein_coding
chr6	127288720	127343346	127288720	127343346	-	ENST00000474289.6@ECHDC1	ENST00000474289.6	protein_coding	127342961,127330809,127327002,127316450,127314816,127288720	127343346,127331030,127327144,127316502,127314896,127290277	Gene ID= ENSG00000093144.18 TPM= 7.55 Transcript Type= protein_coding
chr6	127288762	127331030	127288762	127331030	-	ENST00000368295.8@ECHDC1	ENST00000368295.8	protein_coding	127330809,127326998,127314816,127288762	127331030,127327144,127314896,127290277	Gene ID= ENSG00000093144.18 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr6	127303653	127307660	127303653	127307660	+	transcript5473.chr6.nnic@NA	transcript5473.chr6.nnic	NA	127303653	127307660	Gene ID= novel_gene_chr6_5474 TPM= 10.51 Transcript Type= NA
chr6	127443424	127516247	127443424	127516247	-	transcript5481.chr6.nic@SOGA3	transcript5481.chr6.nic	protein_coding	127515514,127514823,127512891,127482913,127475293,127473080,127453847,127449990,127449822,127446408,127443424	127516247,127515047,127513049,127482984,127476468,127473217,127454101,127450352,127449901,127447740,127444282	Gene ID= ENSG00000255330.9 TPM= 2.34 Transcript Type= NA
chr6	127438406	127519001	127438406	127519001	-	ENST00000481848.6@SOGA3	ENST00000481848.6	protein_coding	127518579,127515514,127514823,127512891,127482913,127475293,127473080,127453847,127449990,127449822,127446408,127438406	127519001,127516702,127515047,127513049,127482984,127476468,127473391,127454101,127450352,127449901,127447740,127444282	Gene ID= ENSG00000255330.9 TPM= 5.84 Transcript Type= nonsense_mediated_decay
chr6	127474590	127516089	127474590	127516089	-	transcript5500.chr6.nic@SOGA3	transcript5500.chr6.nic	protein_coding	127515514,127514823,127512891,127482913,127474590	127516089,127515047,127513049,127482984,127476468	Gene ID= ENSG00000255330.9 TPM= 2.34 Transcript Type= NA
chr6	127443247	127459391	127443247	127459391	-	ENST00000483725.7@KIAA0408	ENST00000483725.7	protein_coding	127459175,127453847,127449990,127449822,127446408,127443247	127459391,127454101,127450352,127449901,127447740,127444282	Gene ID= ENSG00000189367.14 TPM= 2.34 Transcript Type= protein_coding
chr6	127503695	127506648	127503695	127506648	+	transcript5504.chr6.nnic@NA	transcript5504.chr6.nnic	NA	127503695	127506648	Gene ID= novel_gene_chr6_5505 TPM= 3.5 Transcript Type= NA
chr6	127708194	127901081	127708194	127901081	-	ENST00000368248.4@THEMIS	ENST00000368248.4	protein_coding	127900842,127855030,127829476,127812883,127719688,127708194	127901081,127855188,127829934,127813931,127719823,127710016	Gene ID= ENSG00000172673.10 TPM= 1.17 Transcript Type= protein_coding
chr6	127968779	128520674	127968779	128520674	-	ENST00000368226.8@PTPRK	ENST00000368226.8	protein_coding	128520259,128397566,128322039,128242521,128240035,128218922,128184432,128089690,128083715,128082437,128078813,128067519,128064758,128009130,128005084,127998720,127996901,127995462,127992673,127991294,127990769,127985721,127983242,127982831,127981116,127976923,127976657,127973664,127973022,127968779	128520674,128397688,128322310,128242602,128240150,128219096,128184725,128089992,128083824,128082638,128078918,128067792,128064794,128009268,128005244,127998904,127996988,127995538,127992709,127991391,127990885,127985875,127983377,127982980,127981289,127977054,127976782,127973827,127973157,127970280	Gene ID= ENSG00000152894.14 TPM= 44.95 Transcript Type= protein_coding
chr6	127968779	128520615	127968779	128520615	-	transcript5515.chr6.nnic@PTPRK	transcript5515.chr6.nnic	protein_coding	128520259,128397566,128322039,128242521,128240035,128218922,128184432,128089690,128083715,128082437,128078813,128067519,128064758,128009130,128005084,127998720,127995462,127992673,127991294,127990769,127985721,127983242,127982831,127981116,127976923,127976657,127973664,127973022,127968779	128520615,128397688,128322310,128242602,128240150,128219096,128184725,128089992,128083824,128082638,128078918,128067792,128064794,128009268,128005244,127998904,127995538,127992709,127991391,127990885,127985875,127983377,127982980,127981289,127977054,127976782,127973827,127973157,127970280	Gene ID= ENSG00000152894.14 TPM= 6.42 Transcript Type= NA
chr6	128239126	128520615	128239126	128520615	-	transcript5520.chr6.nic@PTPRK	transcript5520.chr6.nic	protein_coding	128520259,128397566,128322039,128242521,128239126	128520615,128397688,128322310,128242602,128240150	Gene ID= ENSG00000152894.14 TPM= 2.34 Transcript Type= NA
chr6	128883141	129516563	128883141	129516563	+	ENST00000618192.4@LAMA2	ENST00000618192.4	protein_coding	128883141,129049918,129059784,129098173,129143901,129146959,129148979,129154505,129165576,129177706,129190205,129192680,129250112,129252084,129260711,129267106,129270624,129280061,129287847,129291614,129297685,129300736,129312861,129314655,129315476,129315762,129316038,129320538,129328278,129342343,129349298,129353164,129366219,129369892,129383122,129391491,129393045,129401224,129402324,129403821,129427752,129438646,129440816,129445664,129452988,129454155,129456335,129460200,129464290,129465145,129473214,129475390,129478693,129481263,129486474,129491901,129492315,129502659,129503091,129505200,129507489,129512363,129514373,129516190	128883357,129050088,129059896,129098415,129144080,129147048,129149096,129154683,129165675,129177866,129190345,129192853,129250213,129252295,129260822,129267219,129270751,129280147,129288058,129291720,129297865,129300872,129313097,129314798,129315655,129315950,129316171,129320655,129328412,129342467,129349384,129353357,129366361,129369990,129383233,129391653,129393255,129401340,129402487,129403959,129427854,129438762,129440998,129445821,129453131,129454288,129456494,129460324,129464452,129465289,129473352,129475401,129478813,129481439,129486622,129492077,129492483,129502771,129503280,129505355,129507642,129512493,129514595,129516563	Gene ID= ENSG00000196569.11 TPM= 19.85 Transcript Type= protein_coding
chr6	129576132	129710225	129576132	129710225	-	ENST00000368149.2@ARHGAP18	ENST00000368149.2	protein_coding	129710024,129641816,129638394,129634042,129629353,129618687,129616212,129611533,129607893,129605877,129600642,129599216,129583988,129580070,129576132	129710225,129642018,129638629,129634105,129629522,129618852,129616303,129611610,129608052,129605959,129600848,129599356,129584112,129580131,129578604	Gene ID= ENSG00000146376.10 TPM= 16.93 Transcript Type= protein_coding
chr6	129577095	129710228	129577095	129710228	-	transcript5534.chr6.nnic@ARHGAP18	transcript5534.chr6.nnic	protein_coding	129710024,129641816,129638394,129634042,129629353,129618687,129616212,129611533,129607893,129605877,129600642,129599216,129580070,129577095	129710228,129642018,129638629,129634105,129629522,129618852,129616303,129611610,129608052,129605959,129600848,129599356,129580131,129578604	Gene ID= ENSG00000146376.10 TPM= 9.92 Transcript Type= NA
chr6	130018589	130140480	130018589	130140480	+	ENST00000533560.5@L3MBTL3	ENST00000533560.5	protein_coding	130018589,130022227,130042685,130049282,130051249,130052859,130055171,130057406,130060036,130066353,130068330,130070976,130078558,130083620,130086140,130092745,130094265,130104426,130120879,130133452,130133843,130139610	130018664,130022305,130042801,130049393,130051408,130052991,130055255,130057497,130060140,130066488,130068421,130071127,130078634,130083705,130086250,130092859,130094367,130104575,130120958,130133621,130133905,130140480	Gene ID= ENSG00000198945.7 TPM= 2.34 Transcript Type= protein_coding
chr6	130144318	130222954	130144318	130222954	-	ENST00000439090.6@SAMD3	ENST00000439090.6	protein_coding	130222694,130216571,130215195,130214337,130209495,130184438,130184103,130175841,130154825,130146010,130145340,130144318	130222954,130216616,130215294,130214526,130209608,130184623,130184187,130176008,130155025,130146181,130145422,130144804	Gene ID= ENSG00000164483.16 TPM= 4.67 Transcript Type= protein_coding
chr6	130839350	131063313	130839350	131063313	-	transcript5550.chr6.nic@EPB41L2	transcript5550.chr6.nic	protein_coding	131063155,130955994,130955105,130926605,130908821,130904465,130900962,130899491,130894967,130894344,130890294,130885096,130880144,130878104,130876674,130870328,130869563,130867459,130865536,130863638,130858131,130839350	131063313,130956499,130955317,130926709,130908863,130904540,130901180,130899578,130895119,130894441,130890466,130885268,130880206,130878250,130876775,130870381,130870126,130867581,130865634,130863718,130858243,130840598	Gene ID= ENSG00000079819.18 TPM= 17.96 Transcript Type= NA
chr6	130839350	130970449	130839350	130970449	-	transcript5554.chr6.nic@EPB41L2	transcript5554.chr6.nic	protein_coding	130970283,130955994,130955105,130926605,130908821,130904465,130900962,130899491,130894967,130894344,130890294,130885096,130880144,130878104,130869563,130867459,130865536,130863638,130858131,130839350	130970449,130956499,130955317,130926709,130908863,130904540,130901180,130899578,130895119,130894441,130890466,130885268,130880206,130878250,130870126,130867581,130865634,130863718,130858243,130840598	Gene ID= ENSG00000079819.18 TPM= 11.34 Transcript Type= NA
chr6	130839347	131063322	130839347	131063322	-	ENST00000337057.7@EPB41L2	ENST00000337057.7	protein_coding	131063155,130955994,130955105,130926605,130908821,130904465,130900962,130899491,130894967,130894344,130890294,130885096,130880144,130878104,130869563,130867459,130865536,130863638,130858131,130839347	131063322,130956499,130955317,130926709,130908863,130904540,130901180,130899578,130895119,130894441,130890466,130885268,130880206,130878250,130870126,130867581,130865634,130863718,130858243,130840598	Gene ID= ENSG00000079819.18 TPM= 19.31 Transcript Type= protein_coding
chr6	130839353	131063258	130839353	131063258	-	ENST00000527411.5@EPB41L2	ENST00000527411.5	protein_coding	131063142,130955994,130955105,130926605,130908821,130904465,130900962,130899491,130894967,130894344,130890294,130885096,130869563,130867459,130865536,130863638,130858131,130839353	131063258,130956499,130955317,130926709,130908863,130904540,130901180,130899578,130895119,130894441,130890466,130885268,130870126,130867581,130865634,130863718,130858243,130840594	Gene ID= ENSG00000079819.18 TPM= 3.67 Transcript Type= protein_coding
chr6	130839347	131063322	130839347	131063322	-	ENST00000628542.2@EPB41L2	ENST00000628542.2	protein_coding	131063155,130955994,130955105,130926605,130908821,130904465,130900962,130899491,130894967,130894344,130890294,130885096,130869563,130867459,130865536,130863638,130858131,130839347	131063322,130956499,130955317,130926709,130908863,130904540,130901180,130899578,130895119,130894441,130890466,130885268,130870126,130867581,130865634,130863718,130858243,130840598	Gene ID= ENSG00000079819.18 TPM= 12.7 Transcript Type= protein_coding
chr6	130839347	131063225	130839347	131063225	-	ENST00000530481.5@EPB41L2	ENST00000530481.5	protein_coding	131063142,130955994,130955105,130926605,130908821,130904465,130900962,130899491,130894967,130894344,130890294,130885096,130869812,130867459,130865536,130863638,130858131,130839347	131063225,130956499,130955317,130926709,130908863,130904540,130901180,130899578,130895119,130894441,130890466,130885268,130870126,130867581,130865634,130863718,130858243,130840598	Gene ID= ENSG00000079819.18 TPM= 5.42 Transcript Type= protein_coding
chr6	131135278	131283532	131135278	131283532	+	transcript5570.chr6.nic@AKAP7	transcript5570.chr6.nic	protein_coding	131135278,131145285,131160059,131165081,131169113,131199461,131219661,131282399	131135782,131145416,131160198,131165217,131169273,131199573,131219808,131283532	Gene ID= ENSG00000118507.15 TPM= 12.84 Transcript Type= NA
chr6	131250159	131283532	131250159	131283532	+	ENST00000342266.4@AKAP7	ENST00000342266.4	protein_coding	131250159,131281530	131250616,131283532	Gene ID= ENSG00000118507.15 TPM= 5.84 Transcript Type= protein_coding
chr6	131135666	131283535	131135666	131283535	+	ENST00000431975.6@AKAP7	ENST00000431975.6	protein_coding	131135666,131145285,131160059,131165081,131169113,131199461,131219661,131281530	131135782,131145416,131160198,131165217,131169273,131199573,131219808,131283535	Gene ID= ENSG00000118507.15 TPM= 4.67 Transcript Type= protein_coding
chr6	131135737	131283532	131135737	131283532	+	ENST00000541650.5@AKAP7	ENST00000541650.5	protein_coding	131135737,131145288,131160059,131165081,131169113,131199461,131219661,131282399	131135782,131145416,131160198,131165217,131169273,131199573,131219808,131283532	Gene ID= ENSG00000118507.15 TPM= 2.34 Transcript Type= protein_coding
chr6	131316007	131317103	131316007	131317103	-	transcript5580.chr6.nnic@NA	transcript5580.chr6.nnic	NA	131316007	131317103	Gene ID= novel_gene_chr6_5581 TPM= 2.34 Transcript Type= NA
chr6	131573144	131584332	131573144	131584332	+	ENST00000368087.7@ARG1	ENST00000368087.7	protein_coding	131573144,131576663,131579111,131581219,131582621,131583060,131583355,131583742	131573339,131576735,131579285,131581378,131582715,131583164,131583491,131584332	Gene ID= ENSG00000118520.14 TPM= 1.17 Transcript Type= protein_coding
chr6	131586738	131628211	131586738	131628211	-	transcript5590.chr6.nnic@MED23	transcript5590.chr6.nnic	protein_coding	131628011,131627641,131627396,131624865,131623351,131621881,131620628,131619827,131618407,131615907,131610046,131606479,131605240,131604178,131603030,131602218,131600038,131598556,131598287,131596518,131595947,131594099,131593006,131592388,131591313,131590322,131589465,131586738	131628211,131627672,131627483,131624989,131623462,131621979,131620729,131619896,131618519,131616002,131610246,131606624,131605485,131604320,131603204,131602381,131600162,131598761,131598467,131596688,131596163,131594335,131593171,131592460,131591527,131590442,131589596,131587846	Gene ID= ENSG00000112282.17 TPM= 2.92 Transcript Type= NA
chr6	131586733	131628229	131586733	131628229	-	ENST00000368068.7@MED23	ENST00000368068.7	protein_coding	131628011,131627641,131627396,131624865,131623351,131621881,131620628,131619827,131618407,131615907,131610046,131607928,131606479,131605240,131604178,131603030,131602218,131600038,131598556,131598287,131596518,131595947,131594099,131593006,131592388,131591313,131590322,131589465,131586733	131628229,131627672,131627483,131624989,131623462,131621979,131620729,131619896,131618519,131616002,131610246,131608071,131606624,131605485,131604320,131603204,131602381,131600162,131598761,131598467,131596688,131596163,131594335,131593171,131592460,131591527,131590442,131589596,131587846	Gene ID= ENSG00000112282.17 TPM= 21.6 Transcript Type= protein_coding
chr6	131624108	131627344	131624108	131627344	+	transcript5593.chr6.nnic@NA	transcript5593.chr6.nnic	NA	131624108	131627344	Gene ID= novel_gene_chr6_5594 TPM= 15.18 Transcript Type= NA
chr6	131948176	131951373	131948176	131951373	-	ENST00000367976.3@CTGF	ENST00000367976.3	protein_coding	131951107,131950770,131950292,131949949,131948176	131951373,131950992,131950543,131950160,131949560	Gene ID= ENSG00000118523.5 TPM= 615.52 Transcript Type= protein_coding
chr6	131948176	131951376	131948176	131951376	-	transcript5602.chr6.nic@CTGF	transcript5602.chr6.nic	protein_coding	131951107,131950770,131949949,131948176	131951376,131950992,131950543,131949560	Gene ID= ENSG00000118523.5 TPM= 39.9 Transcript Type= NA
chr6	132296055	132401487	132296055	132401487	-	transcript5605.chr6.nnic@MOXD1	transcript5605.chr6.nnic	protein_coding	132401163,132374631,132372830,132372608,132328445,132328013,132323931,132322679,132320629,132315635,132297787,132296055	132401487,132374777,132372997,132372691,132328594,132328115,132324097,132322870,132320688,132315777,132297955,132297317	Gene ID= ENSG00000079931.14 TPM= 2.34 Transcript Type= NA
chr6	132296055	132401545	132296055	132401545	-	ENST00000367963.7@MOXD1	ENST00000367963.7	protein_coding	132401163,132374631,132372830,132372608,132328415,132328013,132323931,132322679,132320629,132315635,132297787,132296055	132401545,132374777,132372997,132372691,132328594,132328115,132324097,132322870,132320688,132315777,132297955,132297317	Gene ID= ENSG00000079931.14 TPM= 26.85 Transcript Type= protein_coding
chr6	132457919	132513135	132457919	132513135	-	transcript5617.chr6.nic@STX7	transcript5617.chr6.nic	protein_coding	132513007,132503446,132475593,132471463,132470574,132469951,132468403,132463993,132457919	132513135,132503588,132475662,132472375,132470626,132470047,132468475,132464075,132460850	Gene ID= ENSG00000079950.13 TPM= 8.76 Transcript Type= NA
chr6	132459515	132512810	132459515	132512810	-	transcript5619.chr6.nnic@STX7	transcript5619.chr6.nnic	protein_coding	132512527,132503446,132475593,132471463,132470574,132469951,132468403,132463993,132459515	132512810,132503588,132475662,132472375,132470626,132470047,132468475,132464075,132460850	Gene ID= ENSG00000079950.13 TPM= 3.5 Transcript Type= NA
chr6	132681590	132714049	132681590	132714049	-	ENST00000367928.4@VNN1	ENST00000367928.4	protein_coding	132713826,132711709,132693990,132693024,132692223,132684335,132681590	132714049,132711839,132694182,132693315,132692584,132684505,132683322	Gene ID= ENSG00000112299.7 TPM= 12.84 Transcript Type= protein_coding
chr6	132769370	132798662	132769370	132798662	-	transcript5636.chr6.nic@SLC18B1	transcript5636.chr6.nic	protein_coding	132798414,132796982,132790177,132789764,132787434,132783933,132779268,132776328,132774222,132771036,132770890,132769370	132798662,132797121,132790272,132789837,132787581,132784089,132779404,132776429,132774313,132773088,132770939,132770336	Gene ID= ENSG00000146409.10 TPM= 2.34 Transcript Type= NA
chr6	132769370	132798553	132769370	132798553	-	ENST00000275227.8@SLC18B1	ENST00000275227.8	protein_coding	132798414,132796982,132790177,132789764,132787434,132783933,132779268,132776328,132774222,132772993,132772132,132771036,132770890,132769370	132798553,132797121,132790272,132789837,132787581,132784089,132779404,132776429,132774313,132773088,132772206,132771129,132770939,132770336	Gene ID= ENSG00000146409.10 TPM= 3.5 Transcript Type= protein_coding
chr6	132814441	132817564	132814441	132817564	+	ENST00000230050.3@RPS12	ENST00000230050.3	protein_coding	132814441,132814732,132814972,132816461,132816960,132817480	132814613,132814782,132815088,132816563,132817061,132817564	Gene ID= ENSG00000112306.7 TPM= 807.97 Transcript Type= protein_coding
chr6	132814569	132817564	132814569	132817564	+	ENST00000484616.2@RPS12	ENST00000484616.2	protein_coding	132814569,132814732,132814972,132816461,132816960,132817480	132814613,132814782,132815224,132816563,132817061,132817564	Gene ID= ENSG00000112306.7 TPM= 21.02 Transcript Type= retained_intron
chr6	133370064	133383545	133370064	133383545	+	transcript5647.chr6.nnic@EYA4	transcript5647.chr6.nnic	protein_coding	133370064,133382392	133370283,133383545	Gene ID= ENSG00000112319.17 TPM= 2.34 Transcript Type= NA
chr6	133884722	133892802	133884722	133892802	-	ENST00000607641.3@TARID	ENST00000607641.3	antisense_RNA	133891687,133888604,133884722	133892802,133889212,133887672	Gene ID= ENSG00000227954.6 TPM= 11.68 Transcript Type= antisense_RNA
chr6	133889335	133895553	133889335	133895553	+	ENST00000237316.3@TCF21	ENST00000237316.3	protein_coding	133889335,133891713,133893155	133889847,133891810,133895553	Gene ID= ENSG00000118526.6 TPM= 14.01 Transcript Type= protein_coding
chr6	133901827	133905369	133901827	133905369	-	transcript5656.chr6.nnic@NA	transcript5656.chr6.nnic	NA	133901827	133905369	Gene ID= novel_gene_chr6_5657 TPM= 2.34 Transcript Type= NA
chr6	133905102	133907236	133905102	133907236	+	transcript5654.chr6.nnic@NA	transcript5654.chr6.nnic	NA	133905102	133907236	Gene ID= novel_gene_chr6_5655 TPM= 2.34 Transcript Type= NA
chr6	133988697	134052636	133988697	134052636	-	ENST00000275230.5@SLC2A12	ENST00000275230.5	protein_coding	134052378,134028381,134006812,134001997,133988697	134052636,134029721,134006934,134002129,133991308	Gene ID= ENSG00000146411.5 TPM= 5.84 Transcript Type= protein_coding
chr6	134169250	134175991	134169250	134175991	-	ENST00000413996.7@SGK1	ENST00000413996.7	protein_coding	134175544,134174511,134174005,134173462,134173274,134173023,134172662,134172193,134171637,134171023,134170826,134169250	134175991,134174586,134174080,134173566,134173357,134173154,134172774,134172316,134171732,134171178,134170915,134170435	Gene ID= ENSG00000118515.11 TPM= 104.5 Transcript Type= protein_coding
chr6	134169252	134174896	134169252	134174896	-	ENST00000237305.11@SGK1	ENST00000237305.11	protein_coding	134174732,134174511,134174005,134173462,134173274,134173023,134172662,134172193,134171637,134171023,134170826,134169252	134174896,134174586,134174080,134173566,134173357,134173154,134172774,134172316,134171732,134171178,134170915,134170435	Gene ID= ENSG00000118515.11 TPM= 139.53 Transcript Type= protein_coding
chr6	134169284	134174842	134169284	134174842	-	ENST00000367855.7@SGK1	ENST00000367855.7	protein_coding	134174732,134174511,134174005,134173462,134173274,134173023,134172662,134172193,134171637,134170826,134169284	134174842,134174586,134174080,134173566,134173357,134173154,134172774,134172316,134171732,134171178,134170435	Gene ID= ENSG00000118515.11 TPM= 7.01 Transcript Type= retained_intron
chr6	134964633	135054819	134964633	135054819	-	ENST00000367826.6@HBS1L	ENST00000367826.6	protein_coding	135054649,135050582,135039573,135002734,134997397,134996777,134993758,134987645,134986736,134986066,134985341,134982458,134979178,134978679,134969238,134966329,134964633	135054819,135050647,135039767,135002842,134997656,134996942,134993875,134987791,134986810,134986183,134985409,134982562,134979268,134978787,134969338,134966473,134965290	Gene ID= ENSG00000112339.14 TPM= 2.34 Transcript Type= protein_coding
chr6	135285296	135497776	135285296	135497776	-	ENST00000265602.10@AHI1	ENST00000265602.10	protein_coding	135497583,135497188,135495814,135492228,135490623,135467581,135465814,135463125,135457494,135455734,135453341,135448290,135447008,135442582,135438375,135433027,135431208,135429882,135428629,135427167,135411348,135404951,135394776,135358132,135323162,135318519,135300500,135290423,135285296	135497776,135497249,135495898,135492291,135490747,135467634,135466373,135463306,135457713,135455926,135453436,135448475,135447160,135442714,135438498,135433256,135431314,135430000,135428759,135427307,135411544,135404977,135394896,135358187,135323324,135318616,135300558,135290525,135285647	Gene ID= ENSG00000135541.20 TPM= 1.17 Transcript Type= protein_coding
chr6	135283986	135497765	135283986	135497765	-	ENST00000457866.6@AHI1	ENST00000457866.6	protein_coding	135497583,135497188,135492228,135490623,135467581,135465814,135463125,135457494,135455734,135453341,135448290,135447008,135442582,135438375,135433027,135431208,135429882,135428629,135427167,135411348,135404951,135394776,135358132,135323162,135318519,135300500,135290423,135283986	135497765,135497249,135492291,135490747,135467634,135466373,135463306,135457713,135455926,135453436,135448475,135447160,135442714,135438498,135433256,135431314,135430000,135428759,135427307,135411544,135404977,135394896,135358187,135323324,135318616,135300558,135290525,135285647	Gene ID= ENSG00000135541.20 TPM= 3.5 Transcript Type= protein_coding
chr6	135851696	136195574	135851696	136195574	+	ENST00000308191.10@PDE7B	ENST00000308191.10	protein_coding	135851696,135947464,136108731,136147351,136149087,136151160,136154075,136155627,136173797,136178997,136181227,136187036,136191614	135852019,135947524,136108814,136147502,136149150,136151255,136154175,136155758,136173888,136179141,136181323,136187116,136195574	Gene ID= ENSG00000171408.13 TPM= 4.67 Transcript Type= protein_coding
chr6	136231030	136250311	136231030	136250311	-	ENST00000420702.5@MTFR2	ENST00000420702.5	protein_coding	136249976,136249037,136244765,136242861,136241444,136239466,136233325,136231030	136250311,136249153,136244869,136242973,136241676,136239820,136233499,136231388	Gene ID= ENSG00000146410.11 TPM= 1.17 Transcript Type= protein_coding
chr6	136256627	136289847	136256627	136289847	-	ENST00000640069.1@BCLAF1	ENST00000640069.1	protein_coding	136289713,136282584,136279763,136277865,136275843,136275532,136273082,136271995,136270323,136269437,136269141,136268162,136267029,136261265,136256627	136289847,136282687,136279876,136278776,136276508,136275701,136273187,136272079,136270383,136269612,136269303,136268339,136267175,136261477,136261115	Gene ID= ENSG00000029363.16 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr6	136256863	136289851	136256863	136289851	-	ENST00000531224.5@BCLAF1	ENST00000531224.5	protein_coding	136289713,136282584,136279763,136277865,136275843,136275532,136273082,136271995,136269437,136268162,136267029,136261265,136256863	136289851,136282687,136279876,136278776,136276508,136275701,136273187,136272079,136269612,136268339,136267175,136261477,136261115	Gene ID= ENSG00000029363.16 TPM= 3.5 Transcript Type= protein_coding
chr6	136258593	136289795	136258593	136289795	-	ENST00000527613.5@BCLAF1	ENST00000527613.5	protein_coding	136289713,136282584,136279763,136277865,136275843,136275532,136273082,136271995,136269437,136269141,136268162,136267029,136261265,136258593	136289795,136282687,136279876,136278776,136276508,136275701,136273187,136272079,136269612,136269303,136268339,136267175,136261477,136261115	Gene ID= ENSG00000029363.16 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr6	136258586	136289829	136258586	136289829	-	ENST00000527536.5@BCLAF1	ENST00000527536.5	protein_coding	136289713,136282584,136279763,136277865,136275843,136275532,136273082,136271995,136269437,136268162,136261265,136258586	136289829,136282687,136279876,136278776,136276508,136275701,136273187,136272079,136269612,136268339,136261477,136261115	Gene ID= ENSG00000029363.16 TPM= 3.5 Transcript Type= protein_coding
chr6	136269835	136270982	136269835	136270982	+	transcript5742.chr6.nnic@NA	transcript5742.chr6.nnic	NA	136269835	136270982	Gene ID= novel_gene_chr6_5743 TPM= 4.67 Transcript Type= NA
chr6	136342737	136550819	136342737	136550819	-	ENST00000354570.7@MAP7	ENST00000354570.7	protein_coding	136550342,136421701,136411620,136389354,136388393,136383671,136377755,136372501,136366327,136365735,136362450,136361005,136360697,136359981,136359820,136356692,136345856,136342737	136550819,136421799,136411697,136389517,136388510,136383781,136377868,136372625,136366439,136366018,136362702,136361179,136360798,136360031,136359877,136356794,136346079,136344238	Gene ID= ENSG00000135525.18 TPM= 17.51 Transcript Type= protein_coding
chr6	136342281	136550819	136342281	136550819	-	ENST00000618822.4@MAP7	ENST00000618822.4	protein_coding	136550342,136421701,136411620,136389354,136388393,136377755,136372501,136366327,136365735,136362450,136361005,136360697,136359981,136359820,136356692,136345856,136342281	136550819,136421799,136411697,136389517,136388510,136377868,136372625,136366439,136366018,136362702,136361179,136360798,136360031,136359877,136356794,136346079,136344238	Gene ID= ENSG00000135525.18 TPM= 16.35 Transcript Type= protein_coding
chr6	136557047	136792518	136557047	136792518	-	ENST00000359015.4@MAP3K5	ENST00000359015.4	protein_coding	136791710,136720450,136705110,136698489,136697219,136695951,136694140,136669283,136659219,136656307,136650984,136642520,136639543,136637325,136622848,136614159,136613120,136611282,136605209,136601802,136601022,136592437,136592173,136583555,136580301,136567631,136562503,136561533,136558800,136557047	136792518,136720589,136705133,136698682,136697387,136696057,136694310,136669395,136659378,136656460,136651091,136642569,136639638,136637406,136622981,136614286,136613256,136611387,136605366,136601979,136601042,136592614,136592341,136583740,136580406,136567874,136562615,136561645,136558876,136557818	Gene ID= ENSG00000197442.9 TPM= 30.36 Transcript Type= protein_coding
chr6	136784007	136786402	136784007	136786402	+	transcript5764.chr6.nnic@NA	transcript5764.chr6.nnic	NA	136784007,136785415	136784274,136786402	Gene ID= novel_gene_chr6_5765 TPM= 9.92 Transcript Type= NA
chr6	136784007	136786793	136784007	136786793	+	transcript5766.chr6.nnic@NA	transcript5766.chr6.nnic	NA	136784007,136785415	136784274,136786793	Gene ID= novel_gene_chr6_5767 TPM= 14.59 Transcript Type= NA
chr6	136784007	136788941	136784007	136788941	+	transcript5768.chr6.nnic@NA	transcript5768.chr6.nnic	NA	136784007,136785415	136784274,136788941	Gene ID= novel_gene_chr6_5769 TPM= 22.18 Transcript Type= NA
chr6	136822585	136913937	136822585	136913937	+	ENST00000318471.4@PEX7	ENST00000318471.4	protein_coding	136822585,136825214,136826319,136845615,136846073,136866627,136869890,136872198,136898142,136913458	136822795,136825271,136826469,136845692,136846181,136866733,136870003,136872253,136898241,136913937	Gene ID= ENSG00000112357.12 TPM= 8.17 Transcript Type= protein_coding
chr6	136999971	137045180	136999971	137045180	-	ENST00000367748.4@IL20RA	ENST00000367748.4	protein_coding	137044641,137016968,137009317,137008599,137004621,136999971	137045180,137017103,137009492,137008743,137004760,137002355	Gene ID= ENSG00000016402.13 TPM= 2.92 Transcript Type= protein_coding
chr6	136999971	137044964	136999971	137044964	-	ENST00000316649.9@IL20RA	ENST00000316649.9	protein_coding	137044641,137016968,137011274,137009317,137008599,137004621,136999971	137044964,137017103,137011452,137009492,137008743,137004760,137002355	Gene ID= ENSG00000016402.13 TPM= 5.25 Transcript Type= protein_coding
chr6	137197484	137219449	137197484	137219449	-	ENST00000367739.8@IFNGR1	ENST00000367739.8	protein_coding	137219243,137206963,137206136,137204332,137203499,137200881,137197484	137219449,137207077,137206308,137204504,137203685,137201008,137198639	Gene ID= ENSG00000027697.13 TPM= 878.03 Transcript Type= protein_coding
chr6	137867188	137883311	137867188	137883311	+	ENST00000612899.4@TNFAIP3	ENST00000612899.4	protein_coding	137867188,137871213,137874845,137875688,137875996,137877076,137878432,137880071,137881035	137867542,137871522,137875035,137875835,137876166,137877256,137879351,137880252,137883311	Gene ID= ENSG00000118503.14 TPM= 21.02 Transcript Type= protein_coding
chr6	138088505	138107511	138088505	138107511	-	ENST00000421351.3@PERP	ENST00000421351.3	protein_coding	138107127,138096354,138088505	138107511,138096494,138092268	Gene ID= ENSG00000112378.11 TPM= 7.01 Transcript Type= protein_coding
chr6	138160192	138162545	138160192	138162545	-	transcript5824.chr6.nnic@NA	transcript5824.chr6.nnic	NA	138160192	138162545	Gene ID= novel_gene_chr6_5825 TPM= 2.34 Transcript Type= NA
chr6	138161921	138344663	138161921	138344663	+	ENST00000251691.4@ARFGEF3	ENST00000251691.4	protein_coding	138161921,138170662,138207042,138209910,138229784,138238509,138242952,138245513,138253880,138255436,138261527,138262701,138278451,138279999,138285946,138286701,138287074,138289818,138291733,138293993,138296810,138298606,138307253,138308739,138311407,138313795,138317251,138319703,138321111,138323671,138324023,138328021,138333970,138336295	138162171,138170713,138207123,138210041,138229852,138238631,138242994,138245591,138253984,138255769,138261639,138263611,138278617,138280164,138286053,138286916,138287184,138289968,138292053,138294126,138296955,138298785,138307397,138308861,138311510,138313939,138317379,138319879,138321225,138323773,138324154,138328142,138335188,138344663	Gene ID= ENSG00000112379.8 TPM= 12.84 Transcript Type= protein_coding
chr6	138404247	138413173	138404247	138413173	+	ENST00000367697.7@HEBP2	ENST00000367697.7	protein_coding	138404247,138405145,138405971,138412880	138404597,138405280,138406033,138413173	Gene ID= ENSG00000051620.10 TPM= 2.34 Transcript Type= protein_coding
chr6	138422043	138572540	138422043	138572540	-	ENST00000427025.6@NHSL1	ENST00000427025.6	protein_coding	138571710,138496219,138473306,138447001,138430393,138429711,138422043	138572540,138496371,138473433,138447193,138433680,138429843,138424816	Gene ID= ENSG00000135540.11 TPM= 18.1 Transcript Type= protein_coding
chr6	138692467	138697288	138692467	138697288	+	transcript5843.chr6.nnic@AL590617.2	transcript5843.chr6.nnic	antisense_RNA	138692467,138696597,138696903	138694547,138696704,138697288	Gene ID= ENSG00000225177.5 TPM= 2.34 Transcript Type= NA
chr6	138692469	138697288	138692469	138697288	+	transcript5846.chr6.nnic@AL590617.2	transcript5846.chr6.nnic	antisense_RNA	138692469,138696597,138696903	138692617,138696755,138697288	Gene ID= ENSG00000225177.5 TPM= 2.34 Transcript Type= NA
chr6	138692467	138697288	138692467	138697288	+	transcript5852.chr6.nic@AL590617.2	transcript5852.chr6.nic	antisense_RNA	138692467,138696597	138694547,138697288	Gene ID= ENSG00000225177.5 TPM= 2.34 Transcript Type= NA
chr6	138773520	138793319	138773520	138793319	+	ENST00000332797.10@CCDC28A	ENST00000332797.10	protein_coding	138773520,138776079,138779822,138785227,138788366,138792749	138773902,138776278,138779985,138785381,138788388,138793319	Gene ID= ENSG00000024862.17 TPM= 38.53 Transcript Type= protein_coding
chr6	138904870	138988261	138904870	138988261	-	ENST00000258062.9@REPS1	ENST00000258062.9	protein_coding	138987530,138947790,138945501,138945219,138944498,138943853,138943513,138941335,138929977,138926401,138921037,138920215,138917555,138915858,138914697,138912765,138911276,138908668,138907495,138904870	138988261,138947913,138945697,138945372,138944622,138944015,138943576,138941489,138930098,138926481,138921124,138920316,138917624,138915976,138914761,138912950,138911371,138908816,138907600,138905132	Gene ID= ENSG00000135597.18 TPM= 10.51 Transcript Type= protein_coding
chr6	139028682	139043302	139028682	139043302	+	ENST00000367660.3@ABRACL	ENST00000367660.3	protein_coding	139028682,139034155,139042719	139028875,139034221,139043302	Gene ID= ENSG00000146386.7 TPM= 30.36 Transcript Type= protein_coding
chr6	139135107	139180802	139135107	139180802	+	transcript5873.chr6.nnic@HECA	transcript5873.chr6.nnic	protein_coding	139135107,139174385,139176941	139135667,139174539,139180802	Gene ID= ENSG00000112406.4 TPM= 2.34 Transcript Type= NA
chr6	139135112	139180802	139135112	139180802	+	ENST00000367658.2@HECA	ENST00000367658.2	protein_coding	139135112,139166284,139174385,139176941	139135667,139167324,139174539,139180802	Gene ID= ENSG00000112406.4 TPM= 112.09 Transcript Type= protein_coding
chr6	139168427	139172366	139168427	139172366	-	transcript5874.chr6.nnic@NA	transcript5874.chr6.nnic	NA	139168427	139172366	Gene ID= novel_gene_chr6_5875 TPM= 3.5 Transcript Type= NA
chr6	139240061	139292139	139240061	139292139	-	ENST00000358430.7@TXLNB	ENST00000358430.7	protein_coding	139291921,139288476,139276830,139270456,139262579,139260318,139255564,139247817,139244595,139240061	139292139,139288913,139276921,139270626,139262773,139260437,139255638,139247909,139244690,139243314	Gene ID= ENSG00000164440.14 TPM= 2.34 Transcript Type= protein_coding
chr6	139371807	139374620	139371807	139374620	-	ENST00000367651.3@CITED2	ENST00000367651.3	protein_coding	139374413,139371807	139374620,139373952	Gene ID= ENSG00000164442.9 TPM= 2.34 Transcript Type= protein_coding
chr6	142147230	142224689	142147230	142224689	+	ENST00000367630.8@VTA1	ENST00000367630.8	protein_coding	142147230,142166228,142169550,142170346,142189426,142198439,142203985,142218498	142147399,142166322,142169677,142170421,142189534,142198615,142204065,142224689	Gene ID= ENSG00000009844.15 TPM= 5.84 Transcript Type= protein_coding
chr6	142147162	142220946	142147162	142220946	+	ENST00000620996.4@VTA1	ENST00000620996.4	protein_coding	142147162,142166228,142169550,142170346,142189426,142198439,142218498	142147399,142166322,142169677,142170421,142189534,142198615,142220946	Gene ID= ENSG00000009844.15 TPM= 2.34 Transcript Type= protein_coding
chr6	142147257	142219067	142147257	142219067	+	ENST00000367621.1@VTA1	ENST00000367621.1	protein_coding	142147257,142169550,142170346,142189426,142198439,142203985,142218498	142147399,142169677,142170421,142189534,142198615,142204065,142219067	Gene ID= ENSG00000009844.15 TPM= 1.17 Transcript Type= protein_coding
chr6	142147226	142172989	142147226	142172989	+	transcript5912.chr6.nic@VTA1	transcript5912.chr6.nic	protein_coding	142147226,142166228,142169550,142170346	142147399,142166322,142169677,142172989	Gene ID= ENSG00000009844.15 TPM= 2.34 Transcript Type= NA
chr6	142408081	142446248	142408081	142446248	+	transcript5925.chr6.nic@ADGRG6	transcript5925.chr6.nic	protein_coding	142408081,142409874,142411305,142414969,142415796,142417273,142419821,142437434,142438212,142440908,142443337	142408269,142409919,142411411,142415096,142416064,142417369,142420104,142437535,142438364,142440953,142446248	Gene ID= ENSG00000112414.14 TPM= 11.68 Transcript Type= NA
chr6	142301929	142446248	142301929	142446248	+	ENST00000296932.12@ADGRG6	ENST00000296932.12	protein_coding	142301929,142309544,142367569,142370170,142381951,142390258,142392948,142393896,142397613,142400485,142401994,142402620,142403802,142405688,142408150,142409874,142411305,142414969,142415796,142417273,142419821,142437434,142438212,142440908,142443337	142302331,142309644,142367910,142370793,142382019,142390343,142393000,142393958,142397755,142400596,142402058,142402830,142403973,142405828,142408269,142409919,142411411,142415096,142416064,142417369,142420104,142437535,142438364,142440953,142446248	Gene ID= ENSG00000112414.14 TPM= 32.11 Transcript Type= protein_coding
chr6	142301854	142446266	142301854	142446266	+	ENST00000230173.10@ADGRG6	ENST00000230173.10	protein_coding	142301854,142309544,142367569,142370170,142381951,142383760,142390258,142392948,142393896,142397613,142400485,142401994,142402620,142403802,142405688,142408150,142409874,142411305,142414969,142415796,142417273,142419821,142437434,142438212,142440908,142443337	142302331,142309644,142367910,142370793,142382019,142383843,142390343,142393000,142393958,142397755,142400596,142402058,142402830,142403973,142405828,142408269,142409919,142411411,142415096,142416064,142417369,142420104,142437535,142438364,142440953,142446266	Gene ID= ENSG00000112414.14 TPM= 11.09 Transcript Type= protein_coding
chr6	142751467	142945201	142751467	142945201	-	ENST00000367603.7@HIVEP2	ENST00000367603.7	protein_coding	142945099,142836935,142783521,142776147,142769552,142768382,142764799,142761464,142759772,142751467	142945201,142837047,142783615,142776191,142775125,142768536,142764974,142761565,142760667,142753931	Gene ID= ENSG00000010818.9 TPM= 11.68 Transcript Type= protein_coding
chr6	143060901	143335550	143060901	143335550	+	transcript5935.chr6.nic@AIG1	transcript5935.chr6.nic	protein_coding	143060901,143136835,143165082,143284110,143333282	143061066,143136990,143165183,143284225,143335550	Gene ID= ENSG00000146416.17 TPM= 2.34 Transcript Type= NA
chr6	143060876	143340304	143060876	143340304	+	ENST00000357847.8@AIG1	ENST00000357847.8	protein_coding	143060876,143136835,143165082,143284110,143333282,143339639	143061066,143136990,143165183,143284225,143333445,143340304	Gene ID= ENSG00000146416.17 TPM= 12.84 Transcript Type= protein_coding
chr6	143060901	143190597	143060901	143190597	+	ENST00000494282.6@AIG1	ENST00000494282.6	protein_coding	143060901,143136835,143165082,143187629	143061066,143136990,143165183,143190597	Gene ID= ENSG00000146416.17 TPM= 5.84 Transcript Type= protein_coding
chr6	143426989	143450725	143426989	143450725	-	transcript5941.chr6.nnic@ADAT2	transcript5941.chr6.nnic	protein_coding	143450563,143446835,143441438,143441053,143438590,143433831,143432505,143428612,143426989	143450725,143446898,143444969,143441140,143438694,143433981,143432611,143428684,143428506	Gene ID= ENSG00000189007.15 TPM= 2.34 Transcript Type= NA
chr6	143427819	143450668	143427819	143450668	-	transcript5942.chr6.nnic@ADAT2	transcript5942.chr6.nnic	protein_coding	143450563,143446835,143444928,143441438,143438590,143433831,143432505,143428612,143427819	143450668,143446898,143444969,143444219,143438694,143433981,143432611,143428684,143428506	Gene ID= ENSG00000189007.15 TPM= 2.34 Transcript Type= NA
chr6	143429405	143435177	143429405	143435177	-	transcript5951.chr6.nic@ADAT2	transcript5951.chr6.nic	protein_coding	143433831,143429405	143435177,143432611	Gene ID= ENSG00000189007.15 TPM= 2.34 Transcript Type= NA
chr6	143426989	143450673	143426989	143450673	-	ENST00000237283.8@ADAT2	ENST00000237283.8	protein_coding	143450563,143438590,143433831,143432505,143428612,143426989	143450673,143438694,143433981,143432611,143428684,143428506	Gene ID= ENSG00000189007.15 TPM= 1.17 Transcript Type= protein_coding
chr6	143450877	143474475	143450877	143474475	+	transcript5957.chr6.nic@PEX3	transcript5957.chr6.nic	protein_coding	143450877,143459085,143462916,143468122,143470961,143471383,143471557	143451115,143459216,143462997,143468165,143471085,143471449,143474475	Gene ID= ENSG00000034693.14 TPM= 2.34 Transcript Type= NA
chr6	143450980	143490010	143450980	143490010	+	ENST00000367591.4@PEX3	ENST00000367591.4	protein_coding	143450980,143459085,143462916,143468122,143470961,143471383,143471557,143472160,143474786,143479076,143485152,143489143	143451115,143459216,143462997,143468165,143471085,143471449,143471611,143472328,143474856,143479198,143485248,143490010	Gene ID= ENSG00000034693.14 TPM= 2.34 Transcript Type= protein_coding
chr6	143494811	143511690	143494811	143511690	-	ENST00000002165.10@FUCA2	ENST00000002165.10	protein_coding	143511411,143507237,143503913,143502355,143501932,143497389,143494811	143511690,143507424,143504252,143502565,143502122,143497497,143495847	Gene ID= ENSG00000001036.13 TPM= 2.34 Transcript Type= protein_coding
chr6	143677939	143777383	143677939	143777383	+	transcript5988.chr6.nic@PHACTR2	transcript5988.chr6.nic	protein_coding	143677939,143712016,143748985,143753754,143765261,143772258,143774059,143777328	143678209,143712183,143749065,143753912,143765798,143772457,143774215,143777383	Gene ID= ENSG00000112419.14 TPM= 5.84 Transcript Type= NA
chr6	143826295	143830828	143826295	143830828	+	transcript5993.chr6.nnic@NA	transcript5993.chr6.nnic	NA	143826295	143830828	Gene ID= novel_gene_chr6_5994 TPM= 21.02 Transcript Type= NA
chr6	143843344	143863812	143843344	143863812	+	ENST00000367576.5@LTV1	ENST00000367576.5	protein_coding	143843344,143844486,143846051,143850131,143857303,143857752,143860426,143862104,143862844,143863086,143863417	143843480,143844617,143846224,143850218,143857444,143858007,143860553,143862243,143862896,143863286,143863812	Gene ID= ENSG00000135521.8 TPM= 51.37 Transcript Type= protein_coding
chr6	143940302	144008396	143940302	144008396	-	transcript6004.chr6.nic@PLAGL1	transcript6004.chr6.nic	protein_coding	144008090,143968907,143966158,143964787,143960469,143947985,143940302	144008396,143968978,143966198,143964818,143960542,143948460,143942663	Gene ID= ENSG00000118495.18 TPM= 7.59 Transcript Type= NA
chr6	143940302	144008676	143940302	144008676	-	transcript6012.chr6.nic@PLAGL1	transcript6012.chr6.nic	protein_coding	144008090,143968907,143966158,143964787,143960469,143940302	144008676,143968978,143966198,143964818,143960542,143942663	Gene ID= ENSG00000118495.18 TPM= 8.76 Transcript Type= NA
chr6	144094881	144095573	144094881	144095573	-	ENST00000367569.3@SF3B5	ENST00000367569.3	protein_coding	144094881	144095573	Gene ID= ENSG00000169976.6 TPM= 39.7 Transcript Type= protein_coding
chr6	144150316	144188360	144150316	144188360	+	transcript6022.chr6.nnic@STX11	transcript6022.chr6.nnic	protein_coding	144150316,144168540,144186623	144150703,144168676,144188360	Gene ID= ENSG00000135604.9 TPM= 3.5 Transcript Type= NA
chr6	144150526	144188370	144150526	144188370	+	ENST00000367568.4@STX11	ENST00000367568.4	protein_coding	144150526,144186623	144150703,144188370	Gene ID= ENSG00000135604.9 TPM= 93.41 Transcript Type= protein_coding
chr6	144188727	144189710	144188727	144189710	-	transcript6025.chr6.nnic@NA	transcript6025.chr6.nnic	NA	144188727	144189710	Gene ID= novel_gene_chr6_6026 TPM= 10.51 Transcript Type= NA
chr6	144285285	144445369	144285285	144445369	+	transcript6030.chr6.nic@UTRN	transcript6030.chr6.nic	protein_coding	144285285,144291737,144403123,144421878,144423549,144423986,144426287,144428778,144429581,144435935,144437565,144438745,144440352,144444281	144285821,144291907,144403184,144421970,144423626,144424078,144426459,144428893,144429741,144436138,144437746,144438895,144440471,144445369	Gene ID= ENSG00000152818.18 TPM= 2.34 Transcript Type= NA
chr6	144286414	144445369	144286414	144445369	+	transcript6031.chr6.nnic@UTRN	transcript6031.chr6.nnic	protein_coding	144286414,144291737,144403123,144421878,144423549,144423986,144426287,144428778,144429581,144435935,144437565,144438745,144440352,144444281	144286571,144291907,144403184,144421970,144423626,144424078,144426459,144428893,144429741,144436138,144437746,144438895,144440471,144445369	Gene ID= ENSG00000152818.18 TPM= 2.34 Transcript Type= NA
chr6	144291829	144853034	144291829	144853034	+	ENST00000367545.7@UTRN	ENST00000367545.7	protein_coding	144291829,144403123,144421878,144423549,144423986,144426287,144428778,144429581,144435935,144437565,144438745,144440352,144444281,144447211,144447602,144448600,144451370,144453782,144458770,144459174,144461197,144462654,144473720,144474604,144479812,144482209,144485385,144487548,144488673,144490071,144490929,144493301,144499257,144510944,144513909,144514650,144516229,144516811,144521980,144523016,144531052,144533085,144537582,144539294,144542795,144548640,144550965,144554688,144557157,144577099,144678406,144700087,144730357,144748246,144751806,144754720,144757929,144771907,144774290,144781922,144789194,144793834,144797824,144803036,144820882,144827348,144827611,144828790,144835780,144836301,144839173,144840740,144846805,144850989	144291907,144403184,144421970,144423626,144424078,144426459,144428893,144429741,144436138,144437746,144438895,144440471,144444382,144447318,144447781,144448769,144451493,144453869,144459011,144459354,144461342,144462866,144473833,144474759,144479982,144482388,144485519,144487697,144488834,144490199,144491102,144493456,144499427,144511123,144514037,144514820,144516387,144516948,144522171,144523188,144531202,144533260,144537717,144539443,144542870,144548854,144551082,144554893,144557311,144577288,144678578,144700243,144730486,144748514,144751952,144754798,144757989,144771968,144774364,144782123,144789279,144793991,144797990,144803147,144821018,144827386,144827676,144828855,144835938,144836541,144839284,144840832,144846827,144853034	Gene ID= ENSG00000152818.18 TPM= 74.73 Transcript Type= protein_coding
chr6	145625304	145735855	145625304	145735855	-	ENST00000367519.8@EPM2A	ENST00000367519.8	protein_coding	145735198,145686122,145635245,145625304	145735855,145686296,145635486,145627693	Gene ID= ENSG00000112425.14 TPM= 9.34 Transcript Type= protein_coding
chr6	145793502	145814753	145793502	145814753	-	ENST00000237281.4@FBXO30	ENST00000237281.4	protein_coding	145814603,145804372,145793502	145814753,145806421,145800309	Gene ID= ENSG00000118496.4 TPM= 2.34 Transcript Type= protein_coding
chr6	145884807	145964389	145884807	145964389	-	ENST00000367505.6@SHPRH	ENST00000367505.6	protein_coding	145964157,145954690,145952349,145950264,145948272,145947493,145946233,145945381,145943143,145941623,145940723,145935278,145934907,145933057,145927189,145926204,145924739,145923643,145922663,145922286,145921167,145919348,145918131,145913478,145910448,145894885,145894150,145893215,145888020,145884807	145964389,145955354,145952478,145950482,145948350,145947643,145946341,145945637,145943802,145941874,145940801,145935441,145935163,145933178,145927277,145926296,145924846,145923785,145922836,145922348,145921392,145919491,145918232,145913549,145910636,145894977,145894236,145893393,145888100,145886787	Gene ID= ENSG00000146414.15 TPM= 10.51 Transcript Type= protein_coding
chr6	145884807	145964304	145884807	145964304	-	transcript6054.chr6.nnic@SHPRH	transcript6054.chr6.nnic	protein_coding	145964157,145954690,145952349,145950264,145948272,145947493,145946233,145945381,145943143,145941623,145940723,145935278,145934907,145933057,145927189,145926204,145924739,145923643,145922663,145921167,145919348,145918131,145913478,145910448,145894885,145894150,145888020,145884807	145964304,145955354,145952478,145950482,145948350,145947643,145946341,145945637,145943802,145941874,145940801,145935441,145935163,145933178,145927277,145926296,145924846,145923785,145922836,145921392,145919491,145918232,145913549,145910636,145894977,145894236,145888100,145886787	Gene ID= ENSG00000146414.15 TPM= 2.34 Transcript Type= NA
chr6	145884816	145964097	145884816	145964097	-	ENST00000629427.2@SHPRH	ENST00000629427.2	protein_coding	145963731,145954690,145952349,145950264,145948272,145947493,145946233,145945381,145943143,145941623,145940723,145935278,145934907,145933057,145927189,145926204,145924739,145923643,145922663,145922286,145921167,145919348,145918131,145913478,145910448,145894885,145894150,145893215,145888020,145884816	145964097,145955354,145952478,145950482,145948350,145947643,145946341,145945637,145943802,145941874,145940801,145935441,145935163,145933205,145927277,145926296,145924846,145923785,145922821,145922348,145921392,145919491,145918232,145913549,145910636,145894977,145894236,145893393,145888100,145886787	Gene ID= ENSG00000146414.15 TPM= 2.34 Transcript Type= protein_coding
chr6	146543693	146554965	146543693	146554965	+	ENST00000367495.3@RAB32	ENST00000367495.3	protein_coding	146543693,146549464,146554456	146544121,146549741,146554965	Gene ID= ENSG00000118508.4 TPM= 103.92 Transcript Type= protein_coding
chr6	147203951	147335636	147203951	147335636	+	transcript6079.chr6.nic@STXBP5	transcript6079.chr6.nic	protein_coding	147203951,147205971,147235250,147239170,147260615,147262290,147267084,147278081,147291094,147310084,147311455,147313884,147314264,147314596,147315515,147316229,147324959,147327125,147334157	147204682,147206068,147235331,147239270,147260749,147262353,147267167,147278204,147291172,147310238,147311527,147314031,147314331,147314636,147315735,147316407,147325084,147327276,147335636	Gene ID= ENSG00000164506.14 TPM= 2.34 Transcript Type= NA
chr6	147203703	147246595	147203703	147246595	+	transcript6080.chr6.nnic@STXBP5	transcript6080.chr6.nnic	protein_coding	147203703,147205971,147235250,147239170,147245014	147204682,147206068,147235331,147239270,147246595	Gene ID= ENSG00000164506.14 TPM= 3.5 Transcript Type= NA
chr6	147203703	147242186	147203703	147242186	+	transcript6081.chr6.nic@STXBP5	transcript6081.chr6.nic	protein_coding	147203703,147205971,147235250,147239170	147204682,147206068,147235331,147242186	Gene ID= ENSG00000164506.14 TPM= 3.5 Transcript Type= NA
chr6	148342777	148549082	148342777	148549082	+	transcript6098.chr6.nnic@SASH1	transcript6098.chr6.nnic	protein_coding	148342777,148390134,148440358,148468545,148471417,148474110,148487614,148514324,148519547,148525291,148527453,148531526,148532797,148533771,148534751,148540443,148543680,148546015,148548295	148343223,148390262,148440407,148468585,148471503,148474222,148487715,148514456,148519893,148525365,148527596,148531661,148532966,148533980,148534901,148540556,148544818,148546146,148549082	Gene ID= ENSG00000111961.17 TPM= 6.62 Transcript Type= NA
chr6	148508452	148549082	148508452	148549082	+	transcript6100.chr6.nic@SASH1	transcript6100.chr6.nic	protein_coding	148508452,148514324,148519547,148525291,148527453,148531526,148532797,148533771,148534751,148540443,148543680,148546015,148548295	148508877,148514456,148519893,148525365,148527596,148531661,148532966,148533980,148534901,148540556,148544818,148546146,148549082	Gene ID= ENSG00000111961.17 TPM= 5.45 Transcript Type= NA
chr6	148342826	148470041	148342826	148470041	+	transcript6105.chr6.nic@SASH1	transcript6105.chr6.nic	protein_coding	148342826,148390134,148440184,148440358,148468545	148343223,148390262,148440234,148440407,148470041	Gene ID= ENSG00000111961.17 TPM= 4.67 Transcript Type= NA
chr6	148471387	148488143	148471387	148488143	+	transcript6110.chr6.nic@SASH1	transcript6110.chr6.nic	protein_coding	148471387,148487614	148474222,148488143	Gene ID= ENSG00000111961.17 TPM= 8.17 Transcript Type= NA
chr6	148342593	148552050	148342593	148552050	+	ENST00000367467.7@SASH1	ENST00000367467.7	protein_coding	148342593,148390134,148440184,148440358,148468545,148471417,148474110,148487614,148514324,148519547,148525291,148527453,148531526,148532797,148533771,148534751,148540443,148543680,148546015,148548295	148343223,148390262,148440234,148440407,148468585,148471503,148474222,148487715,148514456,148519893,148525365,148527596,148531661,148532966,148533980,148534901,148540556,148544818,148546146,148552050	Gene ID= ENSG00000111961.17 TPM= 78.23 Transcript Type= protein_coding
chr6	148449080	148453942	148449080	148453942	-	transcript6111.chr6.nnic@NA	transcript6111.chr6.nnic	NA	148449080	148453942	Gene ID= novel_gene_chr6_6112 TPM= 7.01 Transcript Type= NA
chr6	148746909	148748905	148746909	148748905	+	transcript6116.chr6.nnic@NA	transcript6116.chr6.nnic	NA	148746909	148748905	Gene ID= novel_gene_chr6_6117 TPM= 7.01 Transcript Type= NA
chr6	148747328	149076990	148747328	149076990	+	ENST00000367463.4@UST	ENST00000367463.4	protein_coding	148747328,148886986,148941279,148953872,148964410,149019139,149021324,149073833	148747677,148887029,148941434,148953951,148964563,149019236,149021481,149076990	Gene ID= ENSG00000111962.7 TPM= 7.01 Transcript Type= protein_coding
chr6	149497932	149500776	149497932	149500776	+	transcript6131.chr6.nnic@NA	transcript6131.chr6.nnic	NA	149497932	149500776	Gene ID= novel_gene_chr6_6132 TPM= 15.18 Transcript Type= NA
chr6	149504733	149546038	149504733	149546038	-	ENST00000253329.2@PPIL4	ENST00000253329.2	protein_coding	149545936,149541519,149541367,149540942,149535596,149534678,149533458,149526652,149525143,149521060,149517354,149512155,149504733	149546038,149541586,149541431,149541059,149535738,149534774,149533574,149526776,149525209,149521171,149517450,149512302,149505704	Gene ID= ENSG00000131013.3 TPM= 7.01 Transcript Type= protein_coding
chr6	149566393	149594602	149566393	149594602	+	transcript6144.chr6.nnic@GINM1	transcript6144.chr6.nnic	protein_coding	149566393,149572285,149572507,149578822,149579834,149580593,149582440,149590727,149592616	149566534,149572344,149572603,149578973,149579990,149580723,149582603,149592047,149594602	Gene ID= ENSG00000055211.12 TPM= 4.67 Transcript Type= NA
chr6	149566294	149591748	149566294	149591748	+	ENST00000367419.9@GINM1	ENST00000367419.9	protein_coding	149566294,149572285,149572507,149578822,149579834,149580593,149582440,149590727	149566534,149572344,149572603,149578973,149579990,149580723,149582603,149591748	Gene ID= ENSG00000055211.12 TPM= 100.41 Transcript Type= protein_coding
chr6	149594877	149648804	149594877	149648804	-	ENST00000367411.6@KATNA1	ENST00000367411.6	protein_coding	149648469,149638386,149632759,149623103,149604661,149603268,149601594,149598224,149597507,149597063,149594877	149648804,149638560,149632916,149623283,149604782,149603373,149601752,149598350,149597641,149597189,149595234	Gene ID= ENSG00000186625.13 TPM= 18.68 Transcript Type= protein_coding
chr6	149724315	149746572	149724315	149746572	-	ENST00000340413.6@NUP43	ENST00000340413.6	protein_coding	149746376,149745940,149743638,149742390,149738643,149736471,149731613,149724315	149746572,149746062,149743715,149742570,149738778,149736622,149731735,149727198	Gene ID= ENSG00000120253.13 TPM= 7.01 Transcript Type= protein_coding
chr6	149818796	149823924	149818796	149823924	-	transcript6188.chr6.nnic@NA	transcript6188.chr6.nnic	NA	149818796	149823924	Gene ID= novel_gene_chr6_6189 TPM= 21.02 Transcript Type= NA
chr6	149818796	149864365	149818796	149864365	-	transcript6179.chr6.nnic@LRP11	transcript6179.chr6.nnic	protein_coding	149863408,149853003,149842983,149837338,149836085,149818796	149864365,149853160,149843124,149837463,149836297,149820703	Gene ID= ENSG00000120256.9 TPM= 5.84 Transcript Type= NA
chr6	149825658	149864365	149825658	149864365	-	transcript6183.chr6.nic@LRP11	transcript6183.chr6.nic	protein_coding	149863408,149853003,149842983,149837338,149836085,149825658	149864365,149853160,149843124,149837463,149836297,149826359	Gene ID= ENSG00000120256.9 TPM= 10.51 Transcript Type= NA
chr6	149818798	149864026	149818798	149864026	-	ENST00000239367.6@LRP11	ENST00000239367.6	protein_coding	149863408,149853003,149842983,149837338,149836085,149826264,149818798	149864026,149853160,149843124,149837463,149836297,149826359,149820703	Gene ID= ENSG00000120256.9 TPM= 38.53 Transcript Type= protein_coding
chr6	149916878	149923078	149916878	149923078	-	ENST00000367360.6@RAET1G	ENST00000367360.6	protein_coding	149922926,149919553,149919043,149918174,149916878	149923078,149919816,149919324,149918384,149917074	Gene ID= ENSG00000203722.7 TPM= 1.17 Transcript Type= protein_coding
chr6	149942000	149949235	149942000	149949235	+	ENST00000367351.3@ULBP2	ENST00000367351.3	protein_coding	149942000,149945309,149946372,149947320,149948723	149942157,149945572,149946653,149947451,149949235	Gene ID= ENSG00000131015.4 TPM= 9.34 Transcript Type= protein_coding
chr6	149964007	149973710	149964007	149973710	+	ENST00000229708.3@ULBP1	ENST00000229708.3	protein_coding	149964007,149968607,149969085,149970016,149971369	149964134,149968870,149969360,149970147,149973710	Gene ID= ENSG00000111981.4 TPM= 1.17 Transcript Type= protein_coding
chr6	150143076	150250357	150143076	150250357	+	ENST00000361131.4@PPP1R14C	ENST00000361131.4	protein_coding	150143076,150214744,150216824,150248746	150143498,150214827,150216856,150250357	Gene ID= ENSG00000198729.4 TPM= 28.02 Transcript Type= protein_coding
chr6	150147128	150151009	150147128	150151009	-	transcript6200.chr6.nnic@NA	transcript6200.chr6.nnic	NA	150147128	150151009	Gene ID= novel_gene_chr6_6201 TPM= 2.34 Transcript Type= NA
chr6	150709278	150713042	150709278	150713042	-	transcript6214.chr6.nnic@NA	transcript6214.chr6.nnic	NA	150709278	150713042	Gene ID= novel_gene_chr6_6215 TPM= 2.34 Transcript Type= NA
chr6	150865549	151101887	150865549	151101887	+	ENST00000367321.7@MTHFD1L	ENST00000367321.7	protein_coding	150865549,150876090,150877634,150877773,150882762,150885634,150887845,150905650,150918577,150922205,150926122,150936804,150938699,150944486,150945467,150949031,150955995,150960275,150964969,150971947,151009819,151013779,151014880,151015516,151034493,151036965,151092467,151101526	150866049,150876174,150877684,150877826,150882886,150885734,150887981,150905761,150918668,150922302,150926295,150936940,150938745,150944593,150945541,150949133,150956071,150960415,150965037,150972058,151009958,151013820,151014980,151015693,151034600,151037117,151092587,151101887	Gene ID= ENSG00000120254.15 TPM= 18.68 Transcript Type= protein_coding
chr6	150865684	150899021	150865684	150899021	+	transcript6222.chr6.nic@MTHFD1L	transcript6222.chr6.nic	protein_coding	150865684,150876090,150877634,150877773,150882762,150885634,150887842,150898860	150866049,150876174,150877684,150877826,150882886,150885734,150887981,150899021	Gene ID= ENSG00000120254.15 TPM= 2.34 Transcript Type= NA
chr6	150865716	150899021	150865716	150899021	+	ENST00000367307.8@MTHFD1L	ENST00000367307.8	protein_coding	150865716,150876090,150877634,150877773,150882762,150885634,150887845,150898860	150866049,150876174,150877684,150877826,150882886,150885734,150887981,150899021	Gene ID= ENSG00000120254.15 TPM= 3.5 Transcript Type= protein_coding
chr6	150865679	151101885	150865679	151101885	+	ENST00000611279.4@MTHFD1L	ENST00000611279.4	protein_coding	150865679,150876090,150877634,150877773,150882762,150885634,150887842,150905650,150918577,150922205,150926122,150936804,150938699,150944486,150945467,150949031,150955995,150960275,150964969,150971947,151009819,151013779,151014880,151015516,151034493,151036965,151092467,151101526	150866049,150876174,150877684,150877826,150882886,150885734,150887981,150905761,150918668,150922302,150926295,150936940,150938745,150944593,150945541,150949133,150956071,150960415,150965037,150972058,151009958,151013820,151014980,151015693,151034600,151037117,151092587,151101885	Gene ID= ENSG00000120254.15 TPM= 10.51 Transcript Type= protein_coding
chr6	151240374	151356773	151240374	151356773	+	ENST00000253332.5@AKAP12	ENST00000253332.5	protein_coding	151240374,151305747,151348711,151355727	151240724,151305903,151353752,151356773	Gene ID= ENSG00000131016.16 TPM= 33.86 Transcript Type= protein_coding
chr6	151364117	151391054	151364117	151391054	-	transcript6228.chr6.nnic@ZBTB2	transcript6228.chr6.nnic	protein_coding	151390880,151373465,151364117	151391054,151373649,151366892	Gene ID= ENSG00000181472.4 TPM= 10.51 Transcript Type= NA
chr6	151364117	151391548	151364117	151391548	-	ENST00000325144.4@ZBTB2	ENST00000325144.4	protein_coding	151391420,151373465,151364117	151391548,151373649,151366892	Gene ID= ENSG00000181472.4 TPM= 16.35 Transcript Type= protein_coding
chr6	151404854	151452124	151404854	151452124	-	ENST00000367303.8@RMND1	ENST00000367303.8	protein_coding	151452016,151445308,151436446,151433155,151430138,151427482,151423525,151422541,151421245,151417279,151405720,151404854	151452124,151445825,151436554,151433230,151430177,151427582,151423631,151422605,151421321,151417399,151405836,151405267	Gene ID= ENSG00000155906.16 TPM= 9.34 Transcript Type= protein_coding
chr6	151452287	151470101	151452287	151470101	+	ENST00000367294.3@ARMT1	ENST00000367294.3	protein_coding	151452287,151454548,151458328,151464453,151468343	151452586,151454653,151458572,151464618,151470101	Gene ID= ENSG00000146476.10 TPM= 108.59 Transcript Type= protein_coding
chr6	152366992	152381362	152366992	152381362	-	ENST00000454018.6@SYNE1	ENST00000454018.6	protein_coding	152381006,152376776,152376381,152373037,152369471,152368972,152366992	152381362,152376912,152376558,152373219,152369614,152369127,152367382	Gene ID= ENSG00000131018.22 TPM= 1.17 Transcript Type= protein_coding
chr6	152433525	152636883	152433525	152636883	-	ENST00000367248.7@SYNE1	ENST00000367248.7	protein_coding	152636638,152628265,152539960,152526080,152520459,152511571,152511011,152510193,152505201,152502633,152488396,152484835,152483085,152472301,152471597,152465982,152465258,152463353,152462738,152461597,152458757,152455886,152455426,152453586,152451047,152450625,152449533,152447458,152444411,152442075,152441130,152433525	152636883,152628554,152540021,152526175,152520542,152511591,152511103,152510371,152505397,152502742,152488503,152484972,152483249,152472413,152471765,152466078,152465460,152463517,152462890,152461740,152458930,152456044,152455590,152453720,152451205,152450833,152449641,152447622,152444578,152442245,152441270,152436101	Gene ID= ENSG00000131018.22 TPM= 2.34 Transcript Type= protein_coding
chr6	152697895	152724567	152697895	152724567	+	ENST00000367245.5@MYCT1	ENST00000367245.5	protein_coding	152697895,152721742	152698098,152724567	Gene ID= ENSG00000120279.6 TPM= 16.35 Transcript Type= protein_coding
chr6	152697961	152724501	152697961	152724501	+	ENST00000532295.1@MYCT1	ENST00000532295.1	protein_coding	152697961,152721742,152722763	152698098,152722253,152724501	Gene ID= ENSG00000120279.6 TPM= 2.34 Transcript Type= protein_coding
chr6	152970529	152983579	152970529	152983579	-	ENST00000367241.3@FBXO5	ENST00000367241.3	protein_coding	152983234,152974907,152973046,152972272,152970529	152983579,152975621,152973136,152972454,152971414	Gene ID= ENSG00000112029.9 TPM= 7.01 Transcript Type= protein_coding
chr6	152988075	153002683	152988075	153002683	-	transcript6281.chr6.nic@MTRF1L	transcript6281.chr6.nic	protein_coding	153002427,152998550,152995136,152994513,152992857,152991185,152988075	153002683,152998629,152995294,152994676,152992974,152991416,152990095	Gene ID= ENSG00000112031.15 TPM= 5.84 Transcript Type= NA
chr6	152988516	153002734	152988516	153002734	-	transcript6285.chr6.nic@MTRF1L	transcript6285.chr6.nic	protein_coding	153002427,152998550,152995244,152994513,152992857,152991185,152988516	153002734,152998629,152995319,152994676,152992974,152991321,152990095	Gene ID= ENSG00000112031.15 TPM= 3.5 Transcript Type= NA
chr6	153282287	153282733	153282287	153282733	-	ENST00000492974.2@AL590867.2	ENST00000492974.2	processed_pseudogene	153282287	153282733	Gene ID= ENSG00000218426.5 TPM= 1.17 Transcript Type= processed_pseudogene
chr6	154733325	154834060	154733325	154834060	+	ENST00000367178.7@SCAF8	ENST00000367178.7	protein_coding	154733325,154773989,154778001,154787861,154792823,154795009,154801971,154803544,154805369,154808070,154808686,154810015,154815716,154818479,154820177,154822276,154824234,154827172,154830922,154831939	154733930,154774072,154778045,154788022,154792976,154795139,154802147,154803623,154805486,154808201,154808798,154810208,154815816,154818592,154820333,154822409,154824378,154827240,154831140,154834060	Gene ID= ENSG00000213079.9 TPM= 18.68 Transcript Type= protein_coding
chr6	155257665	155314489	155257665	155314489	-	transcript6313.chr6.nic@TFB1M	transcript6313.chr6.nic	protein_coding	155314117,155311188,155298477,155296953,155285158,155260273,155257665	155314489,155311339,155298585,155297104,155285277,155260400,155258082	Gene ID= ENSG00000029639.10 TPM= 3.5 Transcript Type= NA
chr6	156777341	156902762	156777341	156902762	+	transcript6321.chr6.nic@ARID1B	transcript6321.chr6.nic	protein_coding	156777341,156829227,156901376	156779471,156829421,156902762	Gene ID= ENSG00000049618.22 TPM= 7.01 Transcript Type= NA
chr6	156781977	156786320	156781977	156786320	-	transcript6328.chr6.nnic@NA	transcript6328.chr6.nnic	NA	156781977	156786320	Gene ID= novel_gene_chr6_6329 TPM= 14.01 Transcript Type= NA
chr6	156922175	156926638	156922175	156926638	-	transcript6326.chr6.nnic@NA	transcript6326.chr6.nnic	NA	156922175	156926638	Gene ID= novel_gene_chr6_6327 TPM= 2.34 Transcript Type= NA
chr6	157289386	157323601	157289386	157323601	-	ENST00000400788.8@TMEM242	ENST00000400788.8	protein_coding	157323412,157322705,157318782,157289386	157323601,157322805,157318919,157292999	Gene ID= ENSG00000215712.10 TPM= 7.01 Transcript Type= protein_coding
chr6	157381133	157678146	157381133	157678146	+	ENST00000359775.9@ZDHHC14	ENST00000359775.9	protein_coding	157381133,157542585,157592988,157628349,157632834,157645737,157647259,157653525,157672724	157382266,157542745,157593146,157628486,157632882,157645839,157647368,157653627,157678146	Gene ID= ENSG00000175048.16 TPM= 14.59 Transcript Type= protein_coding
chr6	157381133	157673945	157381133	157673945	+	ENST00000414563.6@ZDHHC14	ENST00000414563.6	protein_coding	157381133,157542585,157592988,157628349,157632834,157645737,157647259,157653525,157672769	157382266,157542745,157593146,157628486,157632882,157645839,157647368,157653627,157673945	Gene ID= ENSG00000175048.16 TPM= 20.43 Transcript Type= protein_coding
chr6	158109515	158168270	158109515	158168270	-	ENST00000367104.7@SERAC1	ENST00000367104.7	protein_coding	158168140,158158273,158155315,158150453,158148865,158146782,158144299,158143056,158130373,158128108,158120425,158119029,158117727,158116185,158114789,158113449,158109515	158168270,158158364,158155351,158150589,158148954,158146913,158144420,158143184,158130486,158128270,158120575,158119170,158117821,158116282,158114971,158113592,158111502	Gene ID= ENSG00000122335.13 TPM= 4.67 Transcript Type= protein_coding
chr6	158168352	158199344	158168352	158199344	+	ENST00000607778.1@GTF2H5	ENST00000607778.1	protein_coding	158168352,158170470,158191977	158168395,158170538,158199344	Gene ID= ENSG00000272047.1 TPM= 21.02 Transcript Type= protein_coding
chr6	158372166	158374258	158372166	158374258	-	transcript6370.chr6.nnic@NA	transcript6370.chr6.nnic	NA	158372166	158374258	Gene ID= novel_gene_chr6_6371 TPM= 2.34 Transcript Type= NA
chr6	158312488	158511828	158312488	158511828	+	ENST00000367097.7@TULP4	ENST00000367097.7	protein_coding	158312488,158413065,158429736,158448996,158452134,158461563,158479751,158481055,158489588,158493573,158494753,158498669,158501678,158506578	158314268,158413193,158429897,158449176,158452268,158461729,158479975,158481289,158489732,158493717,158494846,158498812,158504178,158511828	Gene ID= ENSG00000130338.12 TPM= 46.7 Transcript Type= protein_coding
chr6	158536436	158635428	158536436	158635428	+	ENST00000367090.3@TMEM181	ENST00000367090.3	protein_coding	158536436,158573420,158580940,158583954,158585304,158589672,158605267,158607244,158608333,158608659,158623550,158625104,158625703,158628408,158629730,158631323,158631810	158536865,158573523,158580995,158584044,158585425,158589782,158605347,158607343,158608463,158608750,158623607,158625206,158625754,158628490,158629819,158631389,158635428	Gene ID= ENSG00000146433.8 TPM= 7.79 Transcript Type= protein_coding
chr6	158560078	158635428	158560078	158635428	+	transcript6378.chr6.nnic@TMEM181	transcript6378.chr6.nnic	protein_coding	158560078,158573420,158580940,158583954,158585304,158589672,158605267,158607244,158608333,158608659,158623550,158625104,158625703,158628408,158629730,158631323,158631810	158560232,158573523,158580995,158584044,158585425,158589782,158605347,158607343,158608463,158608750,158623607,158625206,158625754,158628490,158629819,158631389,158635428	Gene ID= ENSG00000146433.8 TPM= 61.5 Transcript Type= NA
chr6	158560078	158635428	158560078	158635428	+	transcript6381.chr6.nnic@TMEM181	transcript6381.chr6.nnic	protein_coding	158560078,158573420,158580940,158583954,158585304,158589672,158605267,158607244,158608333,158608659,158623550,158625104,158625703,158631323,158631810	158560232,158573523,158580995,158584044,158585425,158589782,158605347,158607343,158608463,158608750,158623607,158625206,158625754,158631389,158635428	Gene ID= ENSG00000146433.8 TPM= 6.62 Transcript Type= NA
chr6	158560078	158581774	158560078	158581774	+	transcript6382.chr6.nnic@TMEM181	transcript6382.chr6.nnic	protein_coding	158560078,158573420,158580940	158560232,158573523,158581774	Gene ID= ENSG00000146433.8 TPM= 3.5 Transcript Type= NA
chr6	158636474	158644767	158636474	158644767	-	transcript6419.chr6.nic@DYNLT1	transcript6419.chr6.nic	protein_coding	158644682,158641319,158637128,158636474	158644767,158641360,158637894,158636897	Gene ID= ENSG00000146425.10 TPM= 3.5 Transcript Type= NA
chr6	158636474	158644739	158636474	158644739	-	ENST00000367089.7@DYNLT1	ENST00000367089.7	protein_coding	158644682,158641319,158637771,158637128,158636474	158644739,158641360,158637894,158637205,158636897	Gene ID= ENSG00000146425.10 TPM= 75.89 Transcript Type= protein_coding
chr6	158636475	158639836	158636475	158639836	-	transcript6424.chr6.nnic@NA	transcript6424.chr6.nnic	NA	158636475	158639836	Gene ID= novel_gene_chr6_6425 TPM= 2.34 Transcript Type= NA
chr6	158650014	158764876	158650014	158764876	+	ENST00000360448.7@SYTL3	ENST00000360448.7	protein_coding	158650014,158651753,158661269,158662750,158663205,158665395,158682925,158707230,158708322,158713800,158718087,158725503,158745480,158751928,158757211,158760640,158762076,158763304,158764495	158650078,158651842,158661385,158662812,158663378,158665613,158682989,158707281,158708391,158713878,158718211,158725637,158745658,158752030,158757381,158760745,158762178,158763509,158764876	Gene ID= ENSG00000164674.15 TPM= 3.5 Transcript Type= protein_coding
chr6	158765741	158818227	158765741	158818227	-	ENST00000337147.11@EZR	ENST00000337147.11	protein_coding	158818082,158789288,158787108,158785309,158784644,158783520,158776408,158771244,158770764,158769784,158769326,158767261,158765741	158818227,158789371,158787203,158785583,158784727,158783666,158776504,158771407,158770894,158769944,158769418,158767512,158767078	Gene ID= ENSG00000092820.17 TPM= 217.85 Transcript Type= protein_coding
chr6	158765748	158819412	158765748	158819412	-	ENST00000367075.3@EZR	ENST00000367075.3	protein_coding	158819317,158818082,158789288,158787108,158785309,158784644,158783520,158776408,158771244,158770764,158769784,158769326,158767261,158765748	158819412,158818166,158789371,158787203,158785583,158784727,158783666,158776504,158771407,158770894,158769944,158769418,158767512,158767078	Gene ID= ENSG00000092820.17 TPM= 589.14 Transcript Type= protein_coding
chr6	158981589	158999804	158981589	158999804	-	transcript6432.chr6.nic@RSPH3	transcript6432.chr6.nic	protein_coding	158999435,158993839,158986280,158983662,158981589	158999804,158993926,158986421,158983807,158982688	Gene ID= ENSG00000130363.11 TPM= 2.34 Transcript Type= NA
chr6	158977236	159000166	158977236	159000166	-	ENST00000252655.1@RSPH3	ENST00000252655.1	protein_coding	158999435,158993839,158986280,158983662,158982485,158980774,158978260,158977236	159000166,158993926,158986421,158983807,158982688,158980936,158978346,158977848	Gene ID= ENSG00000130363.11 TPM= 4.67 Transcript Type= protein_coding
chr6	158973835	158977223	158973835	158977223	-	transcript6434.chr6.nnic@NA	transcript6434.chr6.nnic	NA	158973835	158977223	Gene ID= novel_gene_chr6_6435 TPM= 2.34 Transcript Type= NA
chr6	159034468	159045152	159034468	159045152	-	ENST00000367066.7@TAGAP	ENST00000367066.7	protein_coding	159044879,159044120,159043978,159043589,159042078,159041354,159040723,159039114,159038114,159034468	159045152,159044204,159044031,159043655,159042244,159041515,159040832,159039309,159038228,159037124	Gene ID= ENSG00000164691.16 TPM= 9.34 Transcript Type= protein_coding
chr6	159092284	159121509	159092284	159121509	-	transcript6448.chr6.nnic@NA	transcript6448.chr6.nnic	NA	159121250,159105222,159095729,159092284	159121509,159105304,159095899,159095310	Gene ID= novel_gene_chr6_6449 TPM= 3.5 Transcript Type= NA
chr6	159679064	159693234	159679064	159693234	-	ENST00000367055.8@SOD2	ENST00000367055.8	protein_coding	159693145,159692661,159688126,159684854,159682474,159679064	159693234,159692863,159688242,159685033,159682638,159679298	Gene ID= ENSG00000112096.16 TPM= 2.34 Transcript Type= protein_coding
chr6	159725585	159756319	159725585	159756319	+	ENST00000358372.8@WTAP	ENST00000358372.8	protein_coding	159725585,159736258,159738990,159742088,159743665,159748191,159753460,159755028	159727333,159736295,159739045,159742146,159743792,159748369,159753614,159756319	Gene ID= ENSG00000146457.14 TPM= 32.69 Transcript Type= protein_coding
chr6	159727493	159756319	159727493	159756319	+	transcript6472.chr6.nnic@WTAP	transcript6472.chr6.nnic	protein_coding	159727493,159736258,159738990,159742088,159743665,159748191,159753460,159755028	159727703,159736295,159739045,159742146,159743792,159748934,159753614,159756319	Gene ID= ENSG00000146457.14 TPM= 3.5 Transcript Type= NA
chr6	159726986	159749415	159726986	159749415	+	transcript6476.chr6.nic@WTAP	transcript6476.chr6.nic	protein_coding	159726986,159736258,159738990,159742088,159743665,159748191	159727333,159736295,159739045,159742146,159743792,159749415	Gene ID= ENSG00000146457.14 TPM= 21.02 Transcript Type= NA
chr6	159739825	159749415	159739825	159749415	+	transcript6480.chr6.nic@WTAP	transcript6480.chr6.nic	protein_coding	159739825,159743665,159748191	159742146,159743792,159749415	Gene ID= ENSG00000146457.14 TPM= 26.85 Transcript Type= NA
chr6	159727500	159756317	159727500	159756317	+	ENST00000621533.4@WTAP	ENST00000621533.4	protein_coding	159727500,159736258,159738990,159742088,159743665,159748191,159753460,159755028	159727703,159736295,159739045,159742146,159743792,159748369,159753614,159756317	Gene ID= ENSG00000146457.14 TPM= 29.19 Transcript Type= protein_coding
chr6	159727566	159749421	159727566	159749421	+	ENST00000631126.2@WTAP	ENST00000631126.2	protein_coding	159727566,159736258,159738990,159742088,159743665,159748191,159748590	159727703,159736295,159739045,159742146,159743792,159748369,159749421	Gene ID= ENSG00000146457.14 TPM= 1.17 Transcript Type= protein_coding
chr6	159727588	159749415	159727588	159749415	+	ENST00000337387.4@WTAP	ENST00000337387.4	protein_coding	159727588,159736258,159738990,159742088,159743665,159748191	159727703,159736295,159739045,159742146,159743792,159749415	Gene ID= ENSG00000146457.14 TPM= 3.5 Transcript Type= protein_coding
chr6	159760258	159762332	159760258	159762332	-	ENST00000535372.1@SOD2	ENST00000535372.1	protein_coding	159761994,159760258	159762332,159761636	Gene ID= ENSG00000112096.16 TPM= 1.17 Transcript Type= processed_transcript
chr6	159760328	159779055	159760328	159779055	+	ENST00000367048.4@ACAT2	ENST00000367048.4	protein_coding	159760328,159762919,159767005,159768511,159775170,159776150,159777302,159778170,159778659	159762142,159763053,159767186,159768628,159775313,159776272,159777456,159778280,159779055	Gene ID= ENSG00000120437.8 TPM= 57.21 Transcript Type= protein_coding
chr6	159762480	159779055	159762480	159779055	+	transcript6501.chr6.nic@ACAT2	transcript6501.chr6.nic	protein_coding	159762480,159762919,159767005,159768511,159775170,159776150,159777302,159778170,159778659	159762777,159763053,159767186,159768628,159775313,159776272,159777456,159778280,159779055	Gene ID= ENSG00000120437.8 TPM= 4.67 Transcript Type= NA
chr6	159761416	159779055	159761416	159779055	+	transcript6503.chr6.nic@ACAT2	transcript6503.chr6.nic	protein_coding	159761416,159767005,159768511,159775170,159776150,159777302,159778170,159778659	159763053,159767186,159768628,159775313,159776272,159777456,159778280,159779055	Gene ID= ENSG00000120437.8 TPM= 4.67 Transcript Type= NA
chr6	159764044	159766397	159764044	159766397	-	transcript6509.chr6.nnic@NA	transcript6509.chr6.nnic	NA	159764044	159766397	Gene ID= novel_gene_chr6_6510 TPM= 2.34 Transcript Type= NA
chr6	159778498	159789749	159778498	159789749	-	ENST00000321394.11@TCP1	ENST00000321394.11	protein_coding	159789405,159788058,159787743,159785900,159785386,159784666,159783941,159780935,159780443,159779895,159779627,159778498	159789749,159788143,159787871,159785997,159785496,159784847,159784067,159781110,159780566,159780087,159779790,159779261	Gene ID= ENSG00000120438.11 TPM= 24.52 Transcript Type= protein_coding
chr6	159786272	159787090	159786272	159787090	+	transcript6507.chr6.nnic@NA	transcript6507.chr6.nnic	NA	159786272	159787090	Gene ID= novel_gene_chr6_6508 TPM= 2.34 Transcript Type= NA
chr6	159789817	159798436	159789817	159798436	+	transcript6511.chr6.nnic@MRPL18	transcript6511.chr6.nnic	protein_coding	159789817,159790668,159790940,159797287,159798052	159789888,159790787,159791126,159797518,159798436	Gene ID= ENSG00000112110.9 TPM= 2.72 Transcript Type= NA
chr6	159790469	159798426	159790469	159798426	+	transcript6514.chr6.nnic@MRPL18	transcript6514.chr6.nnic	protein_coding	159790469,159790940,159797287,159798052	159790639,159791126,159797369,159798426	Gene ID= ENSG00000112110.9 TPM= 3.5 Transcript Type= NA
chr6	159789918	159798436	159789918	159798436	+	transcript6517.chr6.nnic@MRPL18	transcript6517.chr6.nnic	protein_coding	159789918,159790940,159797287,159798052	159790060,159791126,159797518,159798436	Gene ID= ENSG00000112110.9 TPM= 6.22 Transcript Type= NA
chr6	159790466	159798436	159790466	159798436	+	ENST00000367034.4@MRPL18	ENST00000367034.4	protein_coding	159790466,159790940,159797287,159798052	159790639,159791126,159797518,159798436	Gene ID= ENSG00000112110.9 TPM= 52.93 Transcript Type= protein_coding
chr6	159800269	159820704	159800269	159820704	+	ENST00000275275.9@PNLDC1	ENST00000275275.9	protein_coding	159800269,159800673,159801113,159803271,159803965,159804549,159805983,159808740,159809015,159810026,159811701,159813601,159815969,159816543,159817109,159818555,159818946,159819254,159820454	159800383,159800829,159801186,159803310,159804088,159804637,159806083,159808816,159809158,159810095,159811786,159813656,159816033,159816596,159817151,159818654,159819121,159819352,159820704	Gene ID= ENSG00000146453.12 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr6	159969038	160036781	159969038	160036781	+	transcript6525.chr6.nic@IGF2R	transcript6525.chr6.nic	protein_coding	159969038,159991184,160009010,160010687,160024572,160027185,160029550,160032551,160032942,160034419	159969395,159991323,160009134,160010785,160024704,160027314,160029655,160032713,160033107,160036781	Gene ID= ENSG00000197081.12 TPM= 8.17 Transcript Type= NA
chr6	160030823	160034694	160030823	160034694	+	transcript6530.chr6.nic@IGF2R	transcript6530.chr6.nic	protein_coding	160030823,160032942	160032713,160034694	Gene ID= ENSG00000197081.12 TPM= 4.67 Transcript Type= NA
chr6	159972025	159980199	159972025	159980199	+	transcript6531.chr6.nnic@NA	transcript6531.chr6.nnic	NA	159972025	159980199	Gene ID= novel_gene_chr6_6532 TPM= 2.34 Transcript Type= NA
chr6	160066014	160069914	160066014	160069914	-	transcript6533.chr6.nnic@NA	transcript6533.chr6.nnic	NA	160066014	160069914	Gene ID= novel_gene_chr6_6534 TPM= 4.67 Transcript Type= NA
chr6	160348268	160452581	160348268	160452581	+	ENST00000275300.2@SLC22A3	ENST00000275300.2	protein_coding	160348268,160397979,160407041,160408753,160410729,160436780,160436997,160442761,160443630,160447719,160450996	160348848,160398082,160407195,160408921,160410846,160436877,160437211,160442869,160443742,160447818,160452581	Gene ID= ENSG00000146477.5 TPM= 9.34 Transcript Type= protein_coding
chr6	160348373	160452581	160348373	160452581	+	transcript6537.chr6.nnic@SLC22A3	transcript6537.chr6.nnic	protein_coding	160348373,160397979,160407041,160408753,160410729,160436780,160436997,160442761,160443630,160447719,160450996	160349058,160398082,160407195,160408921,160410846,160436877,160437211,160442869,160443742,160447818,160452581	Gene ID= ENSG00000146477.5 TPM= 5.84 Transcript Type= NA
chr6	160348862	160444384	160348862	160444384	+	transcript6539.chr6.nnic@SLC22A3	transcript6539.chr6.nnic	protein_coding	160348862,160397979,160407041,160408753,160410729,160436780,160436997,160442761,160443630	160349058,160398082,160407195,160408921,160410846,160436877,160437211,160442869,160444384	Gene ID= ENSG00000146477.5 TPM= 2.34 Transcript Type= NA
chr6	160451824	160454983	160451824	160454983	+	transcript6547.chr6.nnic@NA	transcript6547.chr6.nnic	NA	160451824	160454983	Gene ID= novel_gene_chr6_6548 TPM= 4.67 Transcript Type= NA
chr6	160990318	160992342	160990318	160992342	-	ENST00000608721.1@AL139393.2	ENST00000608721.1	antisense_RNA	160990318	160992342	Gene ID= ENSG00000272841.1 TPM= 2.34 Transcript Type= antisense_RNA
chr6	160991727	161117385	160991727	161117385	+	ENST00000366919.6@MAP3K4	ENST00000366919.6	protein_coding	160991727,161034259,161048616,161070608,161073466,161080881,161084501,161086379,161086584,161087688,161089322,161091379,161092010,161092978,161093773,161097080,161101892,161102699,161106514,161107899,161108743,161109755,161111836,161112668,161115123,161116850	160992083,161034449,161049979,161070850,161073612,161081038,161084617,161086478,161086667,161087954,161089471,161091540,161092143,161093056,161093851,161097176,161101992,161102779,161106705,161107969,161108859,161109914,161111958,161112774,161115302,161117385	Gene ID= ENSG00000085511.19 TPM= 9.34 Transcript Type= protein_coding
chr6	160991784	161117385	160991784	161117385	+	ENST00000392142.8@MAP3K4	ENST00000392142.8	protein_coding	160991784,161034259,161048616,161070608,161073466,161080881,161084501,161086379,161086584,161087688,161089322,161091379,161092010,161092978,161093773,161097080,161098278,161101892,161102699,161106514,161107899,161108743,161109755,161111836,161112668,161115123,161116850	160992083,161034449,161049979,161070850,161073612,161081038,161084617,161086478,161086667,161087954,161089471,161091540,161092143,161093056,161093851,161097176,161098427,161101992,161102779,161106705,161107969,161108859,161109914,161111958,161112774,161115302,161117385	Gene ID= ENSG00000085511.19 TPM= 3.5 Transcript Type= protein_coding
chr6	160992819	160994297	160992819	160994297	-	transcript6551.chr6.nnic@NA	transcript6551.chr6.nnic	NA	160992819	160994297	Gene ID= novel_gene_chr6_6552 TPM= 2.34 Transcript Type= NA
chr6	161130025	161274061	161130025	161274061	-	ENST00000320285.8@AGPAT4	ENST00000320285.8	protein_coding	161273938,161232036,161166248,161154149,161153346,161149187,161146524,161139422,161130025	161274061,161232302,161166417,161154310,161153499,161149289,161146599,161139620,161136634	Gene ID= ENSG00000026652.13 TPM= 3.5 Transcript Type= protein_coding
chr6	161136073	161274061	161136073	161274061	-	transcript6554.chr6.nic@AGPAT4	transcript6554.chr6.nic	protein_coding	161273938,161232036,161166248,161153346,161149187,161146524,161139422,161136073	161274061,161232302,161166417,161154310,161149255,161146599,161139620,161136634	Gene ID= ENSG00000026652.13 TPM= 3.5 Transcript Type= NA
chr6	163163798	163232335	163163798	163232335	-	transcript6556.chr6.nnic@PACRG-AS3	transcript6556.chr6.nnic	antisense_RNA	163232267,163197172,163196584,163190908,163163798	163232335,163197314,163196662,163190982,163166262	Gene ID= ENSG00000225683.5 TPM= 2.92 Transcript Type= NA
chr6	163163798	163232568	163163798	163232568	-	transcript6558.chr6.nnic@PACRG-AS3	transcript6558.chr6.nnic	antisense_RNA	163232267,163197172,163190908,163163798	163232568,163197314,163190982,163166262	Gene ID= ENSG00000225683.5 TPM= 2.92 Transcript Type= NA
chr6	163413065	163413960	163413065	163413960	-	ENST00000604200.1@CAHM	ENST00000604200.1	lincRNA	163413065	163413960	Gene ID= ENSG00000270419.1 TPM= 1.17 Transcript Type= lincRNA
chr6	163414000	163573800	163414000	163573800	+	ENST00000361758.8@QKI	ENST00000361758.8	protein_coding	163414000,163455279,163478780,163534982,163561982,163563420,163565946,163570694	163415335,163455421,163478896,163535125,163562069,163563719,163566795,163573800	Gene ID= ENSG00000112531.16 TPM= 28.99 Transcript Type= nonsense_mediated_decay
chr6	163414398	163570145	163414398	163570145	+	transcript6593.chr6.nic@QKI	transcript6593.chr6.nic	protein_coding	163414398,163455279,163478780,163534982,163561982,163563444,163565946	163415335,163455421,163478896,163535125,163562069,163563719,163570145	Gene ID= ENSG00000112531.16 TPM= 21.99 Transcript Type= NA
chr6	163414643	163570145	163414643	163570145	+	ENST00000453779.6@QKI	ENST00000453779.6	protein_coding	163414643,163455279,163478780,163534982,163561982,163563420,163565946	163415335,163455421,163478896,163535125,163562069,163563719,163570145	Gene ID= ENSG00000112531.16 TPM= 113.46 Transcript Type= protein_coding
chr6	163414643	163570145	163414643	163570145	+	ENST00000275262.11@QKI	ENST00000275262.11	protein_coding	163414643,163455279,163478780,163534982,163561982,163563420,163564667	163415335,163455421,163478896,163535125,163562069,163563719,163570145	Gene ID= ENSG00000112531.16 TPM= 20.63 Transcript Type= protein_coding
chr6	163484201	163492158	163484201	163492158	-	transcript6599.chr6.nnic@NA	transcript6599.chr6.nnic	NA	163484201	163492158	Gene ID= novel_gene_chr6_6600 TPM= 7.01 Transcript Type= NA
chr6	166319728	166342598	166319728	166342598	-	transcript6608.chr6.nnic@SFT2D1	transcript6608.chr6.nnic	protein_coding	166342419,166331385,166330161,166329507,166328276,166326132,166324537,166322857,166319728	166342598,166331447,166330247,166329589,166328357,166326167,166324595,166322886,166320256	Gene ID= ENSG00000198818.9 TPM= 4.67 Transcript Type= NA
chr6	166331781	166342589	166331781	166342589	-	transcript6619.chr6.nnic@SFT2D1	transcript6619.chr6.nnic	protein_coding	166342419,166331781	166342589,166332045	Gene ID= ENSG00000198818.9 TPM= 3.5 Transcript Type= NA
chr6	166319728	166342591	166319728	166342591	-	ENST00000361731.3@SFT2D1	ENST00000361731.3	protein_coding	166342419,166330161,166329507,166328276,166326132,166324537,166322857,166319728	166342591,166330247,166329589,166328357,166326167,166324595,166322886,166320256	Gene ID= ENSG00000198818.9 TPM= 95.74 Transcript Type= protein_coding
chr6	166364919	166383013	166364919	166383013	-	ENST00000621685.4@MPC1	ENST00000621685.4	protein_coding	166382806,166366969,166366795,166365974,166364919	166383013,166367187,166366891,166366106,166365453	Gene ID= ENSG00000060762.18 TPM= 3.5 Transcript Type= protein_coding
chr6	166364919	166383013	166364919	166383013	-	ENST00000341756.10@MPC1	ENST00000341756.10	protein_coding	166382806,166366795,166365974,166364919	166383013,166366894,166366106,166365453	Gene ID= ENSG00000060762.18 TPM= 92.24 Transcript Type= protein_coding
chr6	166492891	166627192	166492891	166627192	-	transcript6656.chr6.nic@RPS6KA2	transcript6656.chr6.nic	protein_coding	166626921,166538668,166531232,166510277,166508203,166504506,166500887,166492891	166627192,166538784,166531313,166510357,166508282,166504612,166500924,166498650	Gene ID= ENSG00000071242.11 TPM= 9.34 Transcript Type= NA
chr6	166409364	166627243	166409364	166627243	-	ENST00000265678.8@RPS6KA2	ENST00000265678.8	protein_coding	166626921,166538668,166531232,166510277,166508203,166504506,166500887,166498508,166490671,166488833,166469841,166459449,166451103,166448724,166432401,166430453,166423256,166419882,166418225,166413794,166409364	166627243,166538784,166531313,166510357,166508282,166504612,166500924,166498650,166490741,166488921,166469905,166459551,166451233,166448849,166432490,166430611,166423417,166419958,166418342,166413931,166412887	Gene ID= ENSG00000071242.11 TPM= 140.11 Transcript Type= protein_coding
chr6	166465464	166468871	166465464	166468871	+	transcript6660.chr6.nnic@NA	transcript6660.chr6.nnic	NA	166465464	166468871	Gene ID= novel_gene_chr6_6661 TPM= 29.19 Transcript Type= NA
chr6	166929504	166956611	166929504	166956611	-	ENST00000366855.10@RNASET2	ENST00000366855.10	protein_coding	166956097,166955495,166952488,166948570,166946682,166943019,166938895,166934091,166931044,166929504	166956611,166955627,166952548,166948625,166946739,166943089,166939008,166934136,166931118,166929791	Gene ID= ENSG00000026297.15 TPM= 11.09 Transcript Type= protein_coding
chr6	166929504	166956702	166929504	166956702	-	ENST00000508775.5@RNASET2	ENST00000508775.5	protein_coding	166956097,166952488,166948570,166946682,166943019,166938895,166934091,166931044,166929504	166956702,166952548,166948625,166946739,166943089,166939008,166934136,166931118,166929791	Gene ID= ENSG00000026297.15 TPM= 137.19 Transcript Type= protein_coding
chr6	166929516	166956629	166929516	166956629	-	transcript6677.chr6.nnic@RNASET2	transcript6677.chr6.nnic	protein_coding	166956097,166952488,166948570,166946682,166943019,166938895,166931044,166929516	166956629,166952548,166948625,166946739,166943089,166939008,166931118,166929791	Gene ID= ENSG00000026297.15 TPM= 12.84 Transcript Type= NA
chr6	166999182	167052713	166999182	167052713	+	ENST00000366847.8@FGFR1OP	ENST00000366847.8	protein_coding	166999182,167000060,167003193,167003723,167004264,167010813,167013508,167022409,167024782,167026547,167032603,167033875,167039904	166999514,167000113,167003247,167003811,167004401,167010893,167013567,167022635,167024894,167026615,167032642,167033971,167052713	Gene ID= ENSG00000213066.11 TPM= 2.34 Transcript Type= protein_coding
chr6	166999408	167040317	166999408	167040317	+	ENST00000349556.4@FGFR1OP	ENST00000349556.4	protein_coding	166999408,167000060,167003193,167003723,167004264,167010813,167022409,167024782,167026547,167032603,167033875,167039904	166999514,167000113,167003247,167003811,167004401,167010893,167022635,167024894,167026615,167032642,167033971,167040317	Gene ID= ENSG00000213066.11 TPM= 1.17 Transcript Type= protein_coding
chr6	167122769	167139696	167122769	167139696	+	ENST00000341935.9@CCR6	ENST00000341935.9	protein_coding	167122769,167136038,167136240	167123223,167136143,167139696	Gene ID= ENSG00000112486.15 TPM= 3.5 Transcript Type= protein_coding
chr6	167795530	167798248	167795530	167798248	+	ENST00000597278.2@AL009178.2	ENST00000597278.2	lincRNA	167795530	167798248	Gene ID= ENSG00000269155.2 TPM= 2.34 Transcript Type= lincRNA
chr6	167826862	167912191	167826862	167912191	+	transcript6705.chr6.nic@AFDN	transcript6705.chr6.nic	protein_coding	167826862,167864551,167870383,167872214,167875335,167880360,167889215,167890862,167896878,167898205,167902317,167907171,167911101,167911284	167827237,167864746,167870498,167872377,167875495,167880517,167889326,167891029,167896972,167898467,167902386,167907289,167911162,167912191	Gene ID= ENSG00000130396.20 TPM= 5.84 Transcript Type= NA
chr6	167826991	167972020	167826991	167972020	+	ENST00000392112.5@AFDN	ENST00000392112.5	protein_coding	167826991,167864551,167870386,167872217,167875335,167880360,167889215,167890862,167896878,167898205,167902317,167907171,167911101,167911284,167914168,167914644,167915168,167917089,167918735,167922856,167925005,167943129,167943402,167943941,167946707,167947853,167948293,167951186,167962433,167965757,167969114,167969782	167827237,167864746,167870498,167872377,167875495,167880517,167889326,167891029,167896972,167898467,167902386,167907289,167911162,167911489,167914313,167914738,167915433,167917232,167918933,167922959,167925091,167943191,167943475,167944059,167946901,167947944,167948478,167952187,167962567,167965853,167969198,167972020	Gene ID= ENSG00000130396.20 TPM= 4.67 Transcript Type= protein_coding
chr6	167965149	167967344	167965149	167967344	-	transcript6713.chr6.nnic@NA	transcript6713.chr6.nnic	NA	167965149	167967344	Gene ID= novel_gene_chr6_6714 TPM= 2.34 Transcript Type= NA
chr6	168306904	168319722	168306904	168319722	-	ENST00000366795.3@DACT2	ENST00000366795.3	protein_coding	168319388,168311152,168310168,168306904	168319722,168311284,168310446,168309098	Gene ID= ENSG00000164488.11 TPM= 4.67 Transcript Type= protein_coding
chr6	168607884	168667994	168607884	168667994	+	transcript6722.chr6.nnic@SMOC2	transcript6722.chr6.nnic	protein_coding	168607884,168608157,168650681,168652954,168664074,168666421	168607997,168608239,168650783,168653228,168664111,168667994	Gene ID= ENSG00000112562.18 TPM= 3.89 Transcript Type= NA
chr6	168441151	168667994	168441151	168667994	+	ENST00000354536.9@SMOC2	ENST00000354536.9	protein_coding	168441151,168509915,168526346,168527628,168543625,168547086,168549129,168598818,168608157,168650681,168652954,168664074,168666421	168441454,168510086,168526452,168527727,168543672,168547169,168549203,168599004,168608239,168650783,168653228,168664111,168667994	Gene ID= ENSG00000112562.18 TPM= 10.89 Transcript Type= protein_coding
chr6	168441151	168667994	168441151	168667994	+	ENST00000356284.6@SMOC2	ENST00000356284.6	protein_coding	168441151,168509915,168526346,168527628,168543625,168547119,168549129,168598818,168608157,168650681,168652954,168664074,168666421	168441454,168510086,168526452,168527727,168543672,168547169,168549203,168599004,168608239,168650783,168653228,168664111,168667994	Gene ID= ENSG00000112562.18 TPM= 58.76 Transcript Type= protein_coding
chr6	169215780	169254044	169215780	169254044	-	ENST00000366787.7@THBS2	ENST00000366787.7	protein_coding	169253990,169253724,169250733,169248417,169246197,169241762,169240452,169239599,169237625,169237170,169234734,169232890,169232664,169231980,169229572,169228122,169226180,169225145,169223248,169222197,169221430,169220198,169215780	169254044,169253896,169250806,169248973,169246281,169241958,169240592,169239695,169237795,169237346,169234907,169233017,169232816,169232198,169229679,169228281,169226298,169225379,169223475,169222468,169221527,169220337,169217829	Gene ID= ENSG00000186340.14 TPM= 28.61 Transcript Type= protein_coding
chr6	169216192	169253832	169216192	169253832	-	ENST00000617924.4@THBS2	ENST00000617924.4	protein_coding	169253724,169250733,169248417,169246197,169241762,169240452,169239599,169237625,169237170,169234734,169232890,169232664,169231980,169229572,169228122,169226180,169225145,169223248,169222197,169221430,169220198,169216192	169253832,169250806,169248973,169246281,169241958,169240592,169239695,169237795,169237346,169234907,169233017,169232816,169232198,169229679,169228281,169226298,169225379,169223475,169222468,169221527,169220337,169217829	Gene ID= ENSG00000186340.14 TPM= 1.75 Transcript Type= protein_coding
chr6	169657759	169665136	169657759	169665136	-	transcript6744.chr6.nic@WDR27	transcript6744.chr6.nic	protein_coding	169664770,169664166,169662304,169660663,169659451,169659086,169658276,169657759	169665136,169664632,169662424,169660766,169659518,169659207,169658358,169658046	Gene ID= ENSG00000184465.15 TPM= 3.5 Transcript Type= NA
chr6	169702190	169704856	169702190	169704856	+	ENST00000332290.3@C6orf120	ENST00000332290.3	protein_coding	169702190	169704856	Gene ID= ENSG00000185127.6 TPM= 11.68 Transcript Type= protein_coding
chr6	169707028	169724005	169707028	169724005	-	ENST00000612128.1@PHF10	ENST00000612128.1	protein_coding	169723845,169721005,169718788,169717823,169715955,169715708,169714733,169712386,169707028	169724005,169721111,169718918,169717906,169716088,169715857,169714842,169712539,169710391	Gene ID= ENSG00000130024.14 TPM= 38.53 Transcript Type= protein_coding
chr6	169707028	169724005	169707028	169724005	-	ENST00000480008.1@PHF10	ENST00000480008.1	protein_coding	169723845,169721005,169718788,169717823,169715955,169715708,169712386,169707028	169724005,169721111,169718918,169717906,169716088,169715857,169712539,169710391	Gene ID= ENSG00000130024.14 TPM= 4.67 Transcript Type= retained_intron
chr6	169724583	169726093	169724583	169726093	+	transcript6757.chr6.nnic@NA	transcript6757.chr6.nnic	NA	169724583	169726093	Gene ID= novel_gene_chr6_6758 TPM= 3.5 Transcript Type= NA
chr6	169749510	169751587	169749510	169751587	-	ENST00000628156.1@TCTE3	ENST00000628156.1	protein_coding	169749510	169751587	Gene ID= ENSG00000184786.5 TPM= 2.34 Transcript Type= processed_transcript
chr6	169751625	169781584	169751625	169781584	+	ENST00000366773.7@ERMARD	ENST00000366773.7	protein_coding	169751625,169753864,169755283,169756338,169756719,169758968,169759838,169760642,169762429,169766638,169768103,169769540,169773319,169775270,169775940,169776455,169779182,169781330	169751663,169754032,169755422,169756439,169756808,169759065,169759974,169760756,169762531,169766667,169768171,169769713,169773402,169775346,169776065,169776673,169779295,169781584	Gene ID= ENSG00000130023.15 TPM= 8.17 Transcript Type= protein_coding
chr6	169751625	169781520	169751625	169781520	+	ENST00000392095.8@ERMARD	ENST00000392095.8	protein_coding	169751625,169755283,169756338,169756719,169758968,169759838,169760642,169762429,169766638,169768103,169769540,169773319,169775270,169775940,169776455,169779182,169781330	169751663,169755422,169756439,169756808,169759065,169759974,169760756,169762531,169766667,169768171,169769713,169773402,169775346,169776065,169776673,169779295,169781520	Gene ID= ENSG00000130023.15 TPM= 1.17 Transcript Type= protein_coding
chr6	169751644	169781516	169751644	169781516	+	transcript6767.chr6.nic@ERMARD	transcript6767.chr6.nic	protein_coding	169751644,169755283,169756338,169756719,169758968,169759838,169760642,169762429,169766638,169768103,169769540,169773319,169775270,169775940,169776455,169779182,169781330	169754032,169755422,169756439,169756808,169759065,169759974,169760756,169762531,169766667,169768171,169769713,169773402,169775346,169776065,169776673,169779295,169781516	Gene ID= ENSG00000130023.15 TPM= 2.34 Transcript Type= NA
chr6	169751644	169781516	169751644	169781516	+	transcript6770.chr6.nnic@ERMARD	transcript6770.chr6.nnic	protein_coding	169751644,169755283,169756338,169756719,169758968,169759838,169760642,169762429,169766638,169768103,169769540,169775940,169776455,169779182,169781330	169754032,169755422,169756439,169756808,169759065,169759974,169760756,169762531,169766667,169768171,169769713,169776065,169776673,169779295,169781516	Gene ID= ENSG00000130023.15 TPM= 2.34 Transcript Type= NA
chr6	170030777	170034768	170030777	170034768	+	transcript6776.chr6.nnic@NA	transcript6776.chr6.nnic	NA	170030777	170034768	Gene ID= novel_gene_chr6_6777 TPM= 7.01 Transcript Type= NA
chr6	170282206	170291067	170282206	170291067	-	transcript6785.chr6.nnic@DLL1	transcript6785.chr6.nnic	protein_coding	170290086,170289512,170288729,170288239,170284919,170283828,170282988,170282206	170291067,170289808,170288789,170288496,170286298,170284029,170283105,170282879	Gene ID= ENSG00000198719.8 TPM= 5.84 Transcript Type= NA
chr6	170302111	170306605	170302111	170306605	-	transcript6787.chr6.nnic@NA	transcript6787.chr6.nnic	NA	170302111	170306605	Gene ID= novel_gene_chr6_6788 TPM= 2.34 Transcript Type= NA
chr6	170306669	170405078	170306669	170405078	+	transcript6799.chr6.nnic@FAM120B	transcript6799.chr6.nnic	protein_coding	170306669,170317370,170323079,170330449,170358226,170388287,170391013,170395487,170404550,170404763	170306842,170319124,170323259,170330550,170358318,170388493,170391121,170395579,170404601,170405078	Gene ID= ENSG00000112584.13 TPM= 2.34 Transcript Type= NA
chr6	170306756	170407065	170306756	170407065	+	ENST00000476287.3@FAM120B	ENST00000476287.3	protein_coding	170306756,170317370,170323079,170330449,170348151,170358226,170388287,170391013,170395487,170404550,170404763	170306842,170319124,170323259,170330550,170348323,170358318,170388493,170391121,170395579,170404601,170407065	Gene ID= ENSG00000112584.13 TPM= 10.51 Transcript Type= protein_coding
chr6	170535117	170553341	170535117	170553341	-	ENST00000262193.6@PSMB1	ENST00000262193.6	protein_coding	170553130,170549006,170546103,170543601,170537234,170535117	170553341,170549113,170546184,170543730,170537340,170535405	Gene ID= ENSG00000008018.8 TPM= 152.95 Transcript Type= protein_coding
chr6	170554379	170572870	170554379	170572870	+	ENST00000230354.10@TBP	ENST00000230354.10	protein_coding	170554379,170556879,170561791,170564545,170566918,170569612,170571410,170572186	170554463,170557083,170562233,170564632,170567009,170569779,170571504,170572870	Gene ID= ENSG00000112592.13 TPM= 23.94 Transcript Type= protein_coding
chr6	170567397	170568745	170567397	170568745	-	transcript6812.chr6.nnic@NA	transcript6812.chr6.nnic	NA	170567397	170568745	Gene ID= novel_gene_chr6_6813 TPM= 8.17 Transcript Type= NA
chr6	170570770	170572847	170570770	170572847	+	transcript6810.chr6.nnic@NA	transcript6810.chr6.nnic	NA	170570770	170572847	Gene ID= novel_gene_chr6_6811 TPM= 2.92 Transcript Type= NA
chr6	170577129	170584648	170577129	170584648	-	transcript6818.chr6.nnic@PDCD2	transcript6818.chr6.nnic	protein_coding	170584497,170584299,170583505,170583057,170580002,170578857,170577129	170584648,170584410,170583747,170583188,170580105,170578970,170577717	Gene ID= ENSG00000071994.10 TPM= 2.34 Transcript Type= NA
chr6	170581748	170584692	170581748	170584692	-	ENST00000614056.4@PDCD2	ENST00000614056.4	protein_coding	170584299,170583505,170583057,170581748	170584692,170583747,170583188,170582265	Gene ID= ENSG00000071994.10 TPM= 5.25 Transcript Type= protein_coding
chr6	170581792	170584654	170581792	170584654	-	ENST00000443345.2@PDCD2	ENST00000443345.2	protein_coding	170584492,170584299,170583505,170581792	170584654,170584392,170583747,170583188	Gene ID= ENSG00000071994.10 TPM= 1.17 Transcript Type= protein_coding
chr6	170581792	170584674	170581792	170584674	-	transcript6848.chr6.nic@PDCD2	transcript6848.chr6.nic	protein_coding	170583505,170581792	170584674,170583188	Gene ID= ENSG00000071994.10 TPM= 2.34 Transcript Type= NA
chr6	170578482	170584612	170578482	170584612	-	ENST00000542896.5@PDCD2	ENST00000542896.5	protein_coding	170584299,170583505,170583057,170580002,170578857,170578482	170584612,170583747,170583188,170580105,170578970,170578656	Gene ID= ENSG00000071994.10 TPM= 2.92 Transcript Type= protein_coding
chr6	170581745	170584615	170581745	170584615	-	ENST00000537445.5@PDCD2	ENST00000537445.5	protein_coding	170584492,170584299,170583505,170583057,170581745	170584615,170584392,170583747,170583188,170582265	Gene ID= ENSG00000071994.10 TPM= 1.17 Transcript Type= protein_coding
chr6	170581746	170584646	170581746	170584646	-	transcript6849.chr6.nnic@NA	transcript6849.chr6.nnic	NA	170581746	170584646	Gene ID= novel_gene_chr6_6850 TPM= 5.84 Transcript Type= NA
chr7	114105	117259	114105	117259	+	transcript2.chr7.nnic@NA	transcript2.chr7.nnic	NA	114105	117259	Gene ID= novel_gene_chr7_3 TPM= 4.67 Transcript Type= NA
chr7	145936	149176	145936	149176	-	transcript15.chr7.nnic@NA	transcript15.chr7.nnic	NA	145936	149176	Gene ID= novel_gene_chr7_16 TPM= 4.67 Transcript Type= NA
chr7	161765	164972	161765	164972	-	ENST00000567533.1@AC093627.7	ENST00000567533.1	lincRNA	161765	164972	Gene ID= ENSG00000261795.1 TPM= 1.17 Transcript Type= lincRNA
chr7	192969	260745	192969	260745	+	ENST00000313766.5@FAM20C	ENST00000313766.5	protein_coding	192969,195554,208898,246415,248315,255849,256654,257005,258646,259731	193804,195732,208976,246507,248430,256029,256763,257086,258705,260745	Gene ID= ENSG00000177706.8 TPM= 188.74 Transcript Type= protein_coding
chr7	216436	219877	216436	219877	+	transcript35.chr7.nnic@NA	transcript35.chr7.nnic	NA	216436	219877	Gene ID= novel_gene_chr7_36 TPM= 2.34 Transcript Type= NA
chr7	497731	517992	497731	517992	-	transcript48.chr7.nic@PDGFA	transcript48.chr7.nic	protein_coding	517394,512351,510809,501116,497731	517992,512455,510996,501242,498574	Gene ID= ENSG00000197461.13 TPM= 2.34 Transcript Type= NA
chr7	497258	519409	497258	519409	-	ENST00000402802.7@PDGFA	ENST00000402802.7	protein_coding	518939,517394,512351,510809,501116,497258	519409,517490,512455,510996,501242,498574	Gene ID= ENSG00000197461.13 TPM= 16.35 Transcript Type= protein_coding
chr7	549197	727341	549197	727341	-	ENST00000537384.5@PRKAR1B	ENST00000537384.5	protein_coding	727210,711329,680556,677229,607391,606193,596146,584508,579256,551389,549197	727341,711527,680726,677320,607452,606239,596304,584568,579377,551470,550602	Gene ID= ENSG00000188191.14 TPM= 30.36 Transcript Type= protein_coding
chr7	549198	711579	549198	711579	-	transcript68.chr7.nic@PRKAR1B	transcript68.chr7.nic	protein_coding	711329,680556,677229,607391,606193,596146,584508,579256,551389,549198	711579,680726,677320,607452,606239,596304,584568,579377,551470,550602	Gene ID= ENSG00000188191.14 TPM= 22.18 Transcript Type= NA
chr7	602003	608482	602003	608482	+	transcript75.chr7.nnic@AC147651.3	transcript75.chr7.nnic	antisense_RNA	602003,603067,607865	602258,603297,608482	Gene ID= ENSG00000237181.1 TPM= 2.34 Transcript Type= NA
chr7	603185	608482	603185	608482	+	ENST00000429872.1@AC147651.3	ENST00000429872.1	antisense_RNA	603185,607865	603297,608482	Gene ID= ENSG00000237181.1 TPM= 1.17 Transcript Type= antisense_RNA
chr7	726644	786475	726644	786475	+	transcript57.chr7.nnic@DNAAF5	transcript57.chr7.nnic	protein_coding	726644,729663,740819,741347,754589,756782,761753,763806,770471,774048,775006,785517	727315,729847,740943,741465,754821,756994,761896,763974,770618,774198,775162,786475	Gene ID= ENSG00000164818.15 TPM= 11.68 Transcript Type= NA
chr7	726701	786475	726701	786475	+	ENST00000297440.10@DNAAF5	ENST00000297440.10	protein_coding	726701,729663,740819,741347,754589,756782,761753,763806,770471,774048,775006,779953,785517	727315,729847,740943,741465,754821,756994,761896,763974,770618,774198,775162,780144,786475	Gene ID= ENSG00000164818.15 TPM= 60.71 Transcript Type= protein_coding
chr7	728997	731765	728997	731765	-	transcript78.chr7.nnic@NA	transcript78.chr7.nnic	NA	728997	731765	Gene ID= novel_gene_chr7_79 TPM= 5.84 Transcript Type= NA
chr7	816615	874902	816615	874902	+	transcript83.chr7.nic@SUN1	transcript83.chr7.nic	protein_coding	816615,832505,838798,841946,843206,843341,848418,849520,849923,851384,851950,852609,852810,853409,854920,856358,857828,860128,861380,865952,869349,872470,873215	816673,832601,838986,842130,843232,843520,848615,849603,850033,851482,852043,852667,852952,853618,855006,856401,857957,860382,861464,866067,869516,872562,874902	Gene ID= ENSG00000164828.17 TPM= 120.96 Transcript Type= NA
chr7	816615	874902	816615	874902	+	transcript87.chr7.nic@SUN1	transcript87.chr7.nic	protein_coding	816615,832505,838798,841946,843206,843341,848418,849520,849923,851384,851950,852609,853409,854920,856358,857828,860128,861380,865952,869349,872470,873215	816673,832601,838986,842130,843232,843520,848615,849603,850033,851482,852043,852952,853618,855006,856401,857957,860382,861464,866067,869516,872562,874902	Gene ID= ENSG00000164828.17 TPM= 10.5 Transcript Type= NA
chr7	816615	874902	816615	874902	+	transcript88.chr7.nic@SUN1	transcript88.chr7.nic	protein_coding	816615,832505,838798,841946,843206,843341,848418,849520,851384,851950,852609,852810,853409,854920,856358,857828,860128,861380,865952,869349,872470,873215	816673,832601,838986,842130,843232,843520,848615,849603,851482,852043,852667,852952,853618,855006,856401,857957,860382,861464,866067,869516,872562,874902	Gene ID= ENSG00000164828.17 TPM= 14.13 Transcript Type= NA
chr7	816615	874902	816615	874902	+	transcript89.chr7.nic@SUN1	transcript89.chr7.nic	protein_coding	816615,832505,838798,841946,843206,843341,848418,849520,851384,851950,852609,852810,853409,854920,856358,857828,860128,861380,865952,869349,872470,873215	816673,832601,838986,842130,843232,843520,848615,850033,851482,852043,852667,852952,853618,855006,856401,857957,860382,861464,866067,869516,872562,874902	Gene ID= ENSG00000164828.17 TPM= 7.12 Transcript Type= NA
chr7	816632	874902	816632	874902	+	transcript93.chr7.nic@SUN1	transcript93.chr7.nic	protein_coding	816632,838798,841946,843206,843341,848418,849520,849923,851384,851950,852609,852810,853409,854920,856358,857828,860128,861380,865952,869349,872470,873215	816673,838986,842130,843232,843520,848615,849603,850033,851482,852043,852667,852952,853618,855006,856401,857957,860382,861464,866067,869516,872562,874902	Gene ID= ENSG00000164828.17 TPM= 15.88 Transcript Type= NA
chr7	816615	874902	816615	874902	+	transcript103.chr7.nic@SUN1	transcript103.chr7.nic	protein_coding	816615,832505,838798,841946,843206,843341,848418,851384,851950,852609,853409,854920,856358,857828,860128,861380,865952,869349,872470,873215	816673,832601,838986,842130,843232,843520,850033,851482,852043,852952,853618,855006,856401,857957,860382,861464,866067,869516,872562,874902	Gene ID= ENSG00000164828.17 TPM= 7.96 Transcript Type= NA
chr7	816615	874902	816615	874902	+	transcript104.chr7.nic@SUN1	transcript104.chr7.nic	protein_coding	816615,832505,838798,841946,843206,843341,851384,851950,852609,852810,853409,854920,856358,857828,860128,861380,865952,869349,872470,873215	816673,832601,838986,842130,843232,843520,851482,852043,852667,852952,853618,855006,856401,857957,860382,861464,866067,869516,872562,874902	Gene ID= ENSG00000164828.17 TPM= 10.63 Transcript Type= NA
chr7	832501	874902	832501	874902	+	ENST00000401592.5@SUN1	ENST00000401592.5	protein_coding	832501,838798,841946,843206,843341,851384,851950,852609,852810,853409,854920,856358,857828,860128,861380,865952,869349,872470,873215	832601,838986,842130,843232,843520,851482,852043,852667,852952,853618,855006,856401,857957,860382,861464,866067,869516,872562,874902	Gene ID= ENSG00000164828.17 TPM= 3.62 Transcript Type= protein_coding
chr7	832501	874902	832501	874902	+	ENST00000413171.6@SUN1	ENST00000413171.6	protein_coding	832501,838798,841946,843206,843341,848418,849520,849923,851384,851950,852609,853409,854920,856358,857828,860128,861380,865952,869349,872470,873215	832601,838986,842130,843232,843520,848615,849603,850033,851482,852043,852952,853618,855006,856401,857957,860382,861464,866067,869516,872562,874902	Gene ID= ENSG00000164828.17 TPM= 6.99 Transcript Type= retained_intron
chr7	843370	874899	843370	874899	+	ENST00000429178.5@SUN1	ENST00000429178.5	protein_coding	843370,848418,849520,851384,851950,852609,852810,853409,854920,856358,857828,860128,861380,865952,869349,872470,873215	843520,848615,849603,851482,852043,852667,852952,853618,855006,856401,857957,860382,861464,866067,869516,872562,874899	Gene ID= ENSG00000164828.17 TPM= 1.94 Transcript Type= protein_coding
chr7	876552	896434	876552	896434	+	ENST00000265857.7@GET4	ENST00000265857.7	protein_coding	876552,886056,886569,887370,890928,892278,893740,893899,895334	876800,886134,886650,887519,891066,892418,893815,893971,896434	Gene ID= ENSG00000239857.6 TPM= 75.11 Transcript Type= protein_coding
chr7	878576	880389	878576	880389	-	transcript129.chr7.nnic@NA	transcript129.chr7.nnic	NA	878576	880389	Gene ID= novel_gene_chr7_130 TPM= 2.34 Transcript Type= NA
chr7	897901	945816	897901	945816	-	ENST00000611167.4@ADAP1	ENST00000611167.4	protein_coding	945762,935375,926553,919968,905060,904126,900533,900102,899419,899033,897901	945816,935505,926644,920050,905172,904272,900616,900164,899490,899261,898949	Gene ID= ENSG00000105963.13 TPM= 26.27 Transcript Type= protein_coding
chr7	897903	954697	897903	954697	-	ENST00000265846.9@ADAP1	ENST00000265846.9	protein_coding	954396,935375,926553,919968,905060,904126,900533,900102,899419,899033,897903	954697,935505,926644,920050,905172,904272,900616,900164,899490,899261,898949	Gene ID= ENSG00000105963.13 TPM= 41.45 Transcript Type= protein_coding
chr7	966075	975599	966075	975599	-	ENST00000344111.3@COX19	ENST00000344111.3	protein_coding	975428,973181,966075	975599,973292,969456	Gene ID= ENSG00000240230.5 TPM= 2.34 Transcript Type= protein_coding
chr7	997016	1028339	997016	1028339	-	ENST00000412051.5@C7orf50	ENST00000412051.5	protein_coding	1028258,1009950,1000470,997016	1028339,1010143,1000551,997804	Gene ID= ENSG00000146540.14 TPM= 65.09 Transcript Type= protein_coding
chr7	996986	1138257	996986	1138257	-	ENST00000357429.10@C7orf50	ENST00000357429.10	protein_coding	1138189,1127257,1009950,1000470,996986	1138257,1127386,1010143,1000551,997804	Gene ID= ENSG00000146540.14 TPM= 21.31 Transcript Type= protein_coding
chr7	1024502	1028352	1024502	1028352	-	ENST00000465681.1@C7orf50	ENST00000465681.1	protein_coding	1028258,1024502	1028352,1027027	Gene ID= ENSG00000146540.14 TPM= 16.35 Transcript Type= retained_intron
chr7	1017485	1019209	1017485	1019209	+	transcript164.chr7.nnic@NA	transcript164.chr7.nnic	NA	1017485	1019209	Gene ID= novel_gene_chr7_165 TPM= 4.67 Transcript Type= NA
chr7	1044597	1059261	1044597	1059261	+	transcript148.chr7.nnic@GPR146	transcript148.chr7.nnic	protein_coding	1044597,1054064,1057492	1044658,1055483,1059261	Gene ID= ENSG00000164849.9 TPM= 3.5 Transcript Type= NA
chr7	1055300	1059269	1055300	1059269	+	transcript150.chr7.nnic@GPR146	transcript150.chr7.nnic	protein_coding	1055300,1056104,1057492	1055483,1056248,1059269	Gene ID= ENSG00000164849.9 TPM= 5.84 Transcript Type= NA
chr7	1055300	1059259	1055300	1059259	+	transcript151.chr7.nnic@GPR146	transcript151.chr7.nnic	protein_coding	1055300,1056104,1057492	1055483,1056779,1059259	Gene ID= ENSG00000164849.9 TPM= 7.01 Transcript Type= NA
chr7	1055285	1059261	1055285	1059261	+	ENST00000397095.2@GPR146	ENST00000397095.2	protein_coding	1055285,1057492	1055483,1059261	Gene ID= ENSG00000164849.9 TPM= 131.94 Transcript Type= protein_coding
chr7	1044582	1047598	1044582	1047598	+	transcript166.chr7.nnic@NA	transcript166.chr7.nnic	NA	1044582	1047598	Gene ID= novel_gene_chr7_167 TPM= 3.5 Transcript Type= NA
chr7	1086876	1093815	1086876	1093815	+	ENST00000297469.3@GPER1	ENST00000297469.3	protein_coding	1086876,1091407	1087244,1093815	Gene ID= ENSG00000164850.14 TPM= 12.26 Transcript Type= protein_coding
chr7	1088087	1093810	1088087	1093810	+	ENST00000397088.3@GPER1	ENST00000397088.3	protein_coding	1088087,1091407	1088321,1093810	Gene ID= ENSG00000164850.14 TPM= 30.94 Transcript Type= protein_coding
chr7	1113211	1114863	1113211	1114863	-	transcript170.chr7.nnic@NA	transcript170.chr7.nnic	NA	1113211	1114863	Gene ID= novel_gene_chr7_171 TPM= 2.34 Transcript Type= NA
chr7	1149077	1150947	1149077	1150947	+	transcript172.chr7.nnic@NA	transcript172.chr7.nnic	NA	1149077	1150947	Gene ID= novel_gene_chr7_173 TPM= 3.5 Transcript Type= NA
chr7	1152907	1160178	1152907	1160178	-	ENST00000316495.7@ZFAND2A	ENST00000316495.7	protein_coding	1159964,1158158,1157656,1155453,1152907	1160178,1158257,1157750,1155584,1153224	Gene ID= ENSG00000178381.11 TPM= 14.01 Transcript Type= protein_coding
chr7	1434366	1459502	1434366	1459502	-	ENST00000297508.7@MICALL2	ENST00000297508.7	protein_coding	1459184,1450240,1448620,1447575,1446713,1444652,1442192,1440591,1439925,1438840,1438289,1438097,1437890,1437535,1436742,1435101,1434366	1459502,1450288,1448761,1447765,1446828,1445428,1442484,1440684,1440085,1438995,1438353,1438220,1437980,1437608,1436856,1435147,1434672	Gene ID= ENSG00000164877.18 TPM= 31.53 Transcript Type= protein_coding
chr7	1434364	1435923	1434364	1435923	-	transcript195.chr7.nnic@NA	transcript195.chr7.nnic	NA	1434364	1435923	Gene ID= novel_gene_chr7_196 TPM= 4.67 Transcript Type= NA
chr7	1470277	1504367	1470277	1504367	-	ENST00000404767.7@INTS1	ENST00000404767.7	protein_coding	1504323,1503903,1502901,1500170,1499884,1499473,1499255,1498975,1498707,1498412,1497138,1496156,1495433,1494816,1493754,1493010,1489591,1489344,1487760,1487320,1486922,1486625,1485290,1485098,1484003,1483742,1482546,1481342,1480835,1480317,1479430,1478726,1478366,1477753,1477550,1476794,1476570,1476229,1475948,1474705,1474168,1473566,1473072,1472273,1471571,1471133,1470846,1470277	1504367,1504001,1503191,1500366,1500021,1499632,1499360,1499161,1498852,1498553,1497314,1496264,1495553,1494893,1493911,1493106,1489682,1489404,1487957,1487449,1487101,1486774,1485469,1485202,1484170,1483853,1482707,1481488,1480933,1480441,1479684,1478885,1478506,1477936,1477673,1476918,1476657,1476455,1476071,1474838,1474360,1473693,1473184,1472386,1471641,1471224,1470955,1470692	Gene ID= ENSG00000164880.15 TPM= 71.22 Transcript Type= protein_coding
chr7	1537980	1543043	1537980	1543043	+	transcript201.chr7.nic@MAFK	transcript201.chr7.nic	protein_coding	1537980,1539149,1539941	1538457,1539228,1543043	Gene ID= ENSG00000198517.9 TPM= 2.34 Transcript Type= NA
chr7	1530714	1543043	1530714	1543043	+	ENST00000343242.8@MAFK	ENST00000343242.8	protein_coding	1530714,1539149,1539941	1530898,1539228,1543043	Gene ID= ENSG00000198517.9 TPM= 99.25 Transcript Type= protein_coding
chr7	1535087	1539014	1535087	1539014	-	transcript206.chr7.nnic@NA	transcript206.chr7.nnic	NA	1535087	1539014	Gene ID= novel_gene_chr7_207 TPM= 28.02 Transcript Type= NA
chr7	1542235	1556430	1542235	1556430	-	ENST00000297477.9@TMEM184A	ENST00000297477.9	protein_coding	1556114,1555266,1550817,1550305,1550123,1549854,1548519,1547742,1542235	1556430,1555484,1550982,1550395,1550198,1549945,1548688,1547939,1547181	Gene ID= ENSG00000164855.15 TPM= 4.67 Transcript Type= protein_coding
chr7	1567330	1569993	1567330	1569993	-	ENST00000288607.2@PSMG3	ENST00000288607.2	protein_coding	1569124,1567330	1569993,1567850	Gene ID= ENSG00000157778.8 TPM= 25.69 Transcript Type= protein_coding
chr7	1567351	1570045	1567351	1570045	-	ENST00000404674.7@PSMG3	ENST00000404674.7	protein_coding	1570009,1569124,1567351	1570045,1569360,1567850	Gene ID= ENSG00000157778.8 TPM= 2.34 Transcript Type= protein_coding
chr7	1570073	1589626	1570073	1589626	+	ENST00000437621.6@PSMG3-AS1	ENST00000437621.6	lincRNA	1570073,1574715,1575787,1584384	1570279,1574863,1575888,1589626	Gene ID= ENSG00000230487.7 TPM= 9.34 Transcript Type= lincRNA
chr7	1815794	2233243	1815794	2233243	-	ENST00000406869.5@MAD1L1	ENST00000406869.5	protein_coding	2232872,2230549,2229984,2225410,2222575,2219332,2217962,2216157,2215885,2213212,2149152,2069194,2014502,2002065,1980453,1957629,1936687,1898200,1815794	2233243,2230724,2230143,2225550,2222754,2219456,2218043,2216287,2215999,2213273,2149238,2069338,2014642,2002121,1980541,1957719,1936897,1898390,1816228	Gene ID= ENSG00000002822.15 TPM= 64.31 Transcript Type= protein_coding
chr7	1815794	2232974	1815794	2232974	-	ENST00000399654.6@MAD1L1	ENST00000399654.6	protein_coding	2232872,2230549,2229984,2225410,2222575,2219332,2217962,2216157,2215885,2213212,2149152,2069194,2014502,2002065,1980453,1957629,1936687,1898200,1815794	2232974,2230764,2230143,2225550,2222754,2219456,2218043,2216287,2215999,2213273,2149238,2069338,2014642,2002121,1980541,1957719,1936897,1898390,1816228	Gene ID= ENSG00000002822.15 TPM= 16.44 Transcript Type= protein_coding
chr7	1815794	1940567	1815794	1940567	-	transcript239.chr7.nic@MAD1L1	transcript239.chr7.nic	protein_coding	1940088,1936687,1898200,1815794	1940567,1936897,1898390,1816228	Gene ID= ENSG00000002822.15 TPM= 9.92 Transcript Type= NA
chr7	1902416	1906072	1902416	1906072	+	transcript236.chr7.nnic@NA	transcript236.chr7.nnic	NA	1902416,1903621,1903857,1905445	1903413,1903787,1904892,1906072	Gene ID= novel_gene_chr7_237 TPM= 2.34 Transcript Type= NA
chr7	1946690	1950554	1946690	1950554	+	transcript251.chr7.nnic@NA	transcript251.chr7.nnic	NA	1946690	1950554	Gene ID= novel_gene_chr7_252 TPM= 5.84 Transcript Type= NA
chr7	2234195	2242207	2234195	2242207	-	transcript254.chr7.nnic@MRM2	transcript254.chr7.nnic	protein_coding	2242162,2239418,2238015,2234195	2242207,2239676,2238937,2235564	Gene ID= ENSG00000122687.17 TPM= 2.34 Transcript Type= NA
chr7	2234231	2242207	2234231	2242207	-	transcript259.chr7.nnic@MRM2	transcript259.chr7.nnic	protein_coding	2242162,2239418,2234231	2242207,2239676,2235564	Gene ID= ENSG00000122687.17 TPM= 3.5 Transcript Type= NA
chr7	2234291	2242198	2234291	2242198	-	ENST00000242257.12@MRM2	ENST00000242257.12	protein_coding	2242162,2239418,2234291	2242198,2239707,2235564	Gene ID= ENSG00000122687.17 TPM= 16.35 Transcript Type= protein_coding
chr7	2234295	2242189	2234295	2242189	-	ENST00000486040.1@MRM2	ENST00000486040.1	protein_coding	2242162,2239418,2238015,2234295	2242189,2239707,2238937,2235564	Gene ID= ENSG00000122687.17 TPM= 9.34 Transcript Type= processed_transcript
chr7	2242259	2251145	2242259	2251145	+	ENST00000397046.5@NUDT1	ENST00000397046.5	protein_coding	2242259,2242925,2244563,2249857,2250829	2242292,2242975,2244726,2250002,2251145	Gene ID= ENSG00000106268.15 TPM= 8.76 Transcript Type= protein_coding
chr7	2242222	2251145	2242222	2251145	+	ENST00000356714.5@NUDT1	ENST00000356714.5	protein_coding	2242222,2244563,2249857,2250829	2242256,2244726,2250002,2251145	Gene ID= ENSG00000106268.15 TPM= 2.92 Transcript Type= protein_coding
chr7	2248967	2250191	2248967	2250191	-	transcript268.chr7.nnic@NA	transcript268.chr7.nnic	NA	2248967	2250191	Gene ID= novel_gene_chr7_269 TPM= 3.5 Transcript Type= NA
chr7	2251770	2314464	2251770	2314464	-	ENST00000222990.7@SNX8	ENST00000222990.7	protein_coding	2314328,2278100,2275112,2271850,2269559,2264298,2263230,2257735,2257365,2256874,2251770	2314464,2278305,2275229,2271971,2269639,2264458,2263362,2257803,2257514,2257023,2255169	Gene ID= ENSG00000106266.10 TPM= 31.53 Transcript Type= protein_coding
chr7	2255040	2314801	2255040	2314801	-	transcript272.chr7.nnic@SNX8	transcript272.chr7.nnic	protein_coding	2314669,2278100,2275112,2271850,2269559,2264298,2263230,2257735,2257365,2256874,2255040	2314801,2278305,2275229,2271971,2269639,2264458,2263362,2257803,2257514,2257023,2255169	Gene ID= ENSG00000106266.10 TPM= 2.34 Transcript Type= NA
chr7	2354804	2380743	2354804	2380743	+	transcript280.chr7.nic@EIF3B	transcript280.chr7.nic	protein_coding	2354804,2355234,2360710,2362645,2363070,2363632,2364372,2366317,2366525,2366999,2369472,2371777,2372673,2374528,2375389,2376950,2378689,2379134,2379394,2380204	2355116,2355420,2360902,2362764,2363127,2363760,2364529,2366448,2366591,2367045,2369682,2371849,2372795,2374606,2375527,2377075,2378766,2379242,2379511,2380743	Gene ID= ENSG00000106263.17 TPM= 16.15 Transcript Type= NA
chr7	2354804	2380745	2354804	2380745	+	transcript282.chr7.nic@EIF3B	transcript282.chr7.nic	protein_coding	2354804,2355234,2360710,2362645,2363070,2363632,2364372,2366317,2366525,2366999,2369472,2371777,2372673,2374528,2375389,2376950,2378689,2379134,2379394,2380279	2355116,2355420,2360902,2362764,2363127,2363760,2364529,2366448,2366591,2367045,2369682,2371849,2372795,2374606,2375527,2377075,2378766,2379242,2379511,2380745	Gene ID= ENSG00000106263.17 TPM= 13.23 Transcript Type= NA
chr7	2354866	2380743	2354866	2380743	+	ENST00000360876.8@EIF3B	ENST00000360876.8	protein_coding	2354866,2360710,2362645,2363070,2363632,2364372,2366317,2366525,2366999,2369472,2371777,2372673,2374528,2375389,2376950,2378689,2379134,2379394,2380204	2355420,2360902,2362764,2363127,2363760,2364529,2366448,2366591,2367045,2369682,2371849,2372795,2374606,2375527,2377075,2378766,2379242,2379511,2380743	Gene ID= ENSG00000106263.17 TPM= 131.74 Transcript Type= protein_coding
chr7	2354882	2380745	2354882	2380745	+	ENST00000397011.2@EIF3B	ENST00000397011.2	protein_coding	2354882,2360710,2362645,2363070,2363632,2364372,2366317,2366525,2366999,2369472,2371777,2372673,2374528,2375389,2376950,2378689,2379134,2379394,2380279	2355420,2360902,2362764,2363127,2363760,2364529,2366448,2366591,2367045,2369682,2371849,2372795,2374606,2375527,2377075,2378766,2379242,2379511,2380745	Gene ID= ENSG00000106263.17 TPM= 167.35 Transcript Type= protein_coding
chr7	2403442	2434061	2403442	2434061	+	transcript293.chr7.nnic@CHST12	transcript293.chr7.nnic	protein_coding	2403442,2432563	2403550,2434061	Gene ID= ENSG00000136213.9 TPM= 3.5 Transcript Type= NA
chr7	2403560	2434579	2403560	2434579	+	ENST00000618655.1@CHST12	ENST00000618655.1	protein_coding	2403560,2432563	2403673,2434579	Gene ID= ENSG00000136213.9 TPM= 26.85 Transcript Type= protein_coding
chr7	2403558	2434616	2403558	2434616	+	transcript297.chr7.nnic@CHST12	transcript297.chr7.nnic	protein_coding	2403558,2432563	2403659,2434616	Gene ID= ENSG00000136213.9 TPM= 5.84 Transcript Type= NA
chr7	2519769	2528429	2519769	2528429	+	transcript323.chr7.nnic@LFNG	transcript323.chr7.nnic	protein_coding	2519769,2524695,2525219,2525414,2525685,2526244,2526836,2527146,2528089	2520293,2524743,2525318,2525567,2525770,2526409,2526921,2528036,2528429	Gene ID= ENSG00000106003.12 TPM= 10.51 Transcript Type= NA
chr7	2519842	2528429	2519842	2528429	+	ENST00000222725.9@LFNG	ENST00000222725.9	protein_coding	2519842,2524695,2525219,2525414,2525685,2526244,2526836,2527146	2520293,2524743,2525318,2525567,2525770,2526409,2526921,2528429	Gene ID= ENSG00000106003.12 TPM= 10.51 Transcript Type= protein_coding
chr7	2537877	2555524	2537877	2555524	-	transcript317.chr7.nic@BRAT1	transcript317.chr7.nic	protein_coding	2555487,2554305,2547324,2544909,2543590,2543204,2542120,2541718,2541298,2539786,2539544,2539179,2537877	2555524,2554447,2547478,2545056,2543962,2543323,2542211,2541836,2541484,2541052,2539642,2539351,2538764	Gene ID= ENSG00000106009.15 TPM= 8.17 Transcript Type= NA
chr7	2537881	2555524	2537881	2555524	-	transcript318.chr7.nic@BRAT1	transcript318.chr7.nic	protein_coding	2555487,2554305,2547324,2544909,2543590,2543204,2542120,2541718,2541298,2540979,2539786,2539544,2537881	2555524,2554447,2547478,2545056,2543962,2543323,2542211,2541836,2541484,2541052,2539888,2539642,2538764	Gene ID= ENSG00000106009.15 TPM= 8.17 Transcript Type= NA
chr7	2537877	2555727	2537877	2555727	-	ENST00000340611.8@BRAT1	ENST00000340611.8	protein_coding	2555487,2554305,2547324,2544909,2543590,2543204,2542120,2541718,2541298,2540979,2539786,2539544,2539179,2537877	2555727,2554447,2547478,2545056,2543962,2543323,2542211,2541836,2541484,2541052,2539888,2539642,2539351,2538764	Gene ID= ENSG00000106009.15 TPM= 133.11 Transcript Type= protein_coding
chr7	2558972	2614733	2558972	2614733	+	ENST00000623361.3@IQCE	ENST00000623361.3	protein_coding	2558972,2571526,2572192,2573418,2578242,2578476,2582580,2583637,2584236,2586208,2587822,2589907,2593022,2594886,2598465,2601441,2604881,2605876,2607124,2610044	2559217,2571654,2572326,2573488,2578355,2578526,2582650,2583709,2584285,2586371,2587877,2590106,2593126,2594976,2598632,2601464,2604991,2605997,2607227,2614733	Gene ID= ENSG00000106012.17 TPM= 18.68 Transcript Type= protein_coding
chr7	2559079	2607555	2559079	2607555	+	ENST00000476665.5@IQCE	ENST00000476665.5	protein_coding	2559079,2567116,2568954,2571526,2572192,2573418,2578242,2578476,2582580,2583637,2584236,2586208,2587822,2589907,2593022,2594886,2598465,2601441,2604881,2605876,2607124	2559217,2567163,2568999,2571654,2572326,2573488,2578355,2578526,2582650,2583709,2584285,2586371,2587877,2590106,2593126,2594976,2598632,2601464,2604991,2605997,2607555	Gene ID= ENSG00000106012.17 TPM= 3.5 Transcript Type= protein_coding
chr7	2631951	2664802	2631951	2664802	+	ENST00000258796.11@TTYH3	ENST00000258796.11	protein_coding	2631951,2646853,2647142,2647418,2647959,2649567,2649913,2652187,2652918,2656092,2656398,2658286,2658940,2661668	2632278,2647022,2647253,2647638,2648054,2649639,2649988,2652242,2653010,2656184,2656534,2658459,2659015,2664802	Gene ID= ENSG00000136295.14 TPM= 122.6 Transcript Type= protein_coding
chr7	2728561	2844340	2728561	2844340	-	transcript354.chr7.nnic@GNA12	transcript354.chr7.nnic	protein_coding	2843818,2794928,2733451,2728561	2844340,2795143,2733501,2731750	Gene ID= ENSG00000146535.13 TPM= 4.67 Transcript Type= NA
chr7	2728112	2844324	2728112	2844324	-	ENST00000275364.7@GNA12	ENST00000275364.7	protein_coding	2843853,2794928,2733451,2728112	2844324,2795143,2733501,2731750	Gene ID= ENSG00000146535.13 TPM= 38.53 Transcript Type= protein_coding
chr7	3319880	3321552	3319880	3321552	-	transcript360.chr7.nnic@NA	transcript360.chr7.nnic	NA	3319880	3321552	Gene ID= novel_gene_chr7_361 TPM= 2.34 Transcript Type= NA
chr7	3619078	3970585	3619078	3970585	+	transcript363.chr7.nic@SDK1	transcript363.chr7.nic	protein_coding	3619078,3639004,3641958,3821450,3950923,3951730,3958931,3962657,3967318,3969257	3619239,3639110,3642105,3821583,3951034,3951920,3959014,3962851,3967434,3970585	Gene ID= ENSG00000146555.18 TPM= 4.09 Transcript Type= NA
chr7	4682309	4771443	4682309	4771443	+	ENST00000328914.4@FOXK1	ENST00000328914.4	protein_coding	4682309,4740838,4754459,4755237,4756994,4759051,4759311,4761064,4762184	4682868,4741023,4754615,4755383,4757187,4759217,4759595,4761288,4771443	Gene ID= ENSG00000164916.10 TPM= 40.87 Transcript Type= protein_coding
chr7	4775667	4791750	4775667	4791750	+	transcript373.chr7.nic@AP5Z1	transcript373.chr7.nic	protein_coding	4775667,4781175,4781568,4783316,4783689,4784203,4784908,4785415,4785522,4786250,4787596,4788840,4789832,4790459,4790673,4791115	4775756,4781312,4781754,4783460,4783798,4784371,4785048,4785452,4785684,4786428,4788294,4788951,4789929,4790591,4790887,4791750	Gene ID= ENSG00000242802.6 TPM= 4.38 Transcript Type= NA
chr7	4775626	4791750	4775626	4791750	+	transcript378.chr7.nnic@AP5Z1	transcript378.chr7.nnic	protein_coding	4775626,4781175,4783316,4783689,4784203,4784908,4785415,4785522,4786250,4787634,4788154,4788840,4789832,4790459,4790673,4791115	4775756,4781312,4783460,4783798,4784371,4785048,4785452,4785684,4786428,4787776,4788294,4788951,4789929,4790591,4790887,4791750	Gene ID= ENSG00000242802.6 TPM= 6.71 Transcript Type= NA
chr7	4775622	4791768	4775622	4791768	+	ENST00000348624.4@AP5Z1	ENST00000348624.4	protein_coding	4775622,4781175,4781568,4783316,4783689,4784203,4784908,4785415,4785522,4786250,4787634,4788154,4788840,4789832,4790459,4790673,4791115	4775756,4781312,4781754,4783460,4783798,4784371,4785048,4785452,4785684,4786428,4787776,4788294,4788951,4789929,4790591,4790887,4791768	Gene ID= ENSG00000242802.6 TPM= 82.61 Transcript Type= protein_coding
chr7	4791543	4794395	4791543	4794395	+	transcript405.chr7.nnic@NA	transcript405.chr7.nnic	NA	4791543	4794395	Gene ID= novel_gene_chr7_406 TPM= 2.34 Transcript Type= NA
chr7	4799105	4882214	4799105	4882214	-	transcript385.chr7.nic@RADIL	transcript385.chr7.nic	protein_coding	4882109,4877605,4836358,4834607,4832141,4822394,4817239,4816228,4815278,4805566,4803546,4801653,4800171,4799630,4799105	4882214,4878203,4836605,4835239,4832178,4822554,4817351,4816465,4815450,4805716,4803754,4801995,4800310,4799769,4799483	Gene ID= ENSG00000157927.16 TPM= 11.68 Transcript Type= NA
chr7	4799105	4883719	4799105	4883719	-	ENST00000399583.3@RADIL	ENST00000399583.3	protein_coding	4883596,4877605,4836358,4834607,4832141,4822394,4817239,4816228,4815278,4805566,4803546,4801653,4800171,4799630,4799105	4883719,4878203,4836605,4835239,4832178,4822554,4817351,4816465,4815450,4805716,4803754,4801995,4800310,4799769,4799483	Gene ID= ENSG00000157927.16 TPM= 10.51 Transcript Type= protein_coding
chr7	4857733	4861994	4857733	4861994	-	ENST00000404991.1@PAPOLB	ENST00000404991.1	protein_coding	4857733	4861994	Gene ID= ENSG00000218823.1 TPM= 1.17 Transcript Type= protein_coding
chr7	4974031	4998167	4974031	4998167	+	transcript407.chr7.nic@RNF216P1	transcript407.chr7.nic	transcribed_unprocessed_pseudogene	4974031,4976301,4983671,4984910,4989063,4995475,4996610	4974161,4976436,4983773,4985075,4989177,4995582,4998167	Gene ID= ENSG00000196204.11 TPM= 5.25 Transcript Type= NA
chr7	4974037	4998165	4974037	4998165	+	ENST00000404006.5@RNF216P1	ENST00000404006.5	transcribed_unprocessed_pseudogene	4974037,4976301,4983671,4984910,4989063,4996610	4974161,4976436,4983773,4985075,4989177,4998165	Gene ID= ENSG00000196204.11 TPM= 9.92 Transcript Type= processed_transcript
chr7	5045922	5069488	5045922	5069488	+	ENST00000396912.1@RBAK	ENST00000396912.1	protein_coding	5045922,5048033,5057295,5057684,5063695	5046396,5048091,5057421,5057779,5069488	Gene ID= ENSG00000146587.17 TPM= 3.5 Transcript Type= protein_coding
chr7	5190188	5233826	5190188	5233826	+	ENST00000288828.8@WIPI2	ENST00000288828.8	protein_coding	5190188,5193118,5199576,5214535,5216563,5217090,5217922,5222602,5225823,5227180,5228104,5229608,5230835	5190493,5193171,5199658,5214704,5216659,5217187,5218014,5222672,5225930,5227344,5228211,5229738,5233826	Gene ID= ENSG00000157954.14 TPM= 12.84 Transcript Type= protein_coding
chr7	5190196	5231524	5190196	5231524	+	ENST00000401525.7@WIPI2	ENST00000401525.7	protein_coding	5190196,5199576,5214535,5216563,5217090,5217922,5222602,5225823,5227180,5228104,5229608,5230835	5190493,5199658,5214704,5216659,5217187,5218014,5222672,5225930,5227344,5228211,5229738,5231524	Gene ID= ENSG00000157954.14 TPM= 7.01 Transcript Type= protein_coding
chr7	5225285	5231724	5225285	5231724	+	transcript435.chr7.nic@WIPI2	transcript435.chr7.nic	protein_coding	5225285,5228104,5229608,5230835	5227344,5228211,5229705,5231724	Gene ID= ENSG00000157954.14 TPM= 2.34 Transcript Type= NA
chr7	5190246	5231104	5190246	5231104	+	ENST00000404704.7@WIPI2	ENST00000404704.7	protein_coding	5190246,5193118,5199576,5214535,5216563,5217090,5217922,5222602,5225823,5227180,5228104,5229608,5230835	5190493,5193171,5199658,5214704,5216659,5217187,5218014,5222672,5225930,5227344,5228211,5229705,5231104	Gene ID= ENSG00000157954.14 TPM= 3.5 Transcript Type= protein_coding
chr7	5190273	5231470	5190273	5231470	+	ENST00000382384.6@WIPI2	ENST00000382384.6	protein_coding	5190273,5199576,5214535,5216563,5217090,5217922,5222602,5225823,5227180,5228104,5229608,5230835	5190493,5199658,5214704,5216659,5217187,5218014,5222672,5225930,5227344,5228211,5229705,5231470	Gene ID= ENSG00000157954.14 TPM= 2.34 Transcript Type= protein_coding
chr7	5282930	5306870	5282930	5306870	+	ENST00000396872.7@SLC29A4	ENST00000396872.7	protein_coding	5282930,5287809,5290732,5291124,5291693,5294860,5296936,5298988,5299240,5300422,5302797	5283082,5287985,5290863,5291237,5291821,5294934,5297198,5299126,5299427,5300662,5306870	Gene ID= ENSG00000164638.10 TPM= 1.17 Transcript Type= protein_coding
chr7	5282969	5304060	5282969	5304060	+	ENST00000297195.8@SLC29A4	ENST00000297195.8	protein_coding	5282969,5287806,5290732,5291124,5291693,5294860,5296936,5298988,5299240,5300422,5302797	5283082,5287985,5290863,5291237,5291821,5294934,5297198,5299126,5299427,5300662,5304060	Gene ID= ENSG00000164638.10 TPM= 5.84 Transcript Type= protein_coding
chr7	5351292	5374414	5351292	5374414	-	transcript442.chr7.nic@TNRC18	transcript442.chr7.nic	protein_coding	5374055,5370375,5362650,5361897,5361594,5359398,5356916,5351292	5374414,5371364,5362825,5362033,5361722,5359569,5357276,5352094	Gene ID= ENSG00000182095.14 TPM= 8.17 Transcript Type= NA
chr7	5351939	5356182	5351939	5356182	+	transcript455.chr7.nnic@NA	transcript455.chr7.nnic	NA	5351939	5356182	Gene ID= novel_gene_chr7_456 TPM= 11.68 Transcript Type= NA
chr7	5388506	5390377	5388506	5390377	+	transcript457.chr7.nnic@NA	transcript457.chr7.nnic	NA	5388506	5390377	Gene ID= novel_gene_chr7_458 TPM= 4.67 Transcript Type= NA
chr7	5480558	5513798	5480558	5513798	-	ENST00000382368.7@FBXL18	ENST00000382368.7	protein_coding	5513657,5505412,5500488,5491231,5480558	5513798,5505630,5502031,5491449,5481931	Gene ID= ENSG00000155034.18 TPM= 7.01 Transcript Type= protein_coding
chr7	5475794	5478617	5475794	5478617	-	transcript467.chr7.nnic@NA	transcript467.chr7.nnic	NA	5475794	5478617	Gene ID= novel_gene_chr7_468 TPM= 3.5 Transcript Type= NA
chr7	5478885	5480654	5478885	5480654	+	transcript465.chr7.nnic@NA	transcript465.chr7.nnic	NA	5478885	5480654	Gene ID= novel_gene_chr7_466 TPM= 4.67 Transcript Type= NA
chr7	5527151	5530709	5527151	5530709	-	ENST00000331789.9@ACTB	ENST00000331789.9	protein_coding	5530524,5529535,5529161,5528281,5528004,5527151	5530709,5529663,5529400,5528719,5528185,5527891	Gene ID= ENSG00000075624.13 TPM= 4603.34 Transcript Type= protein_coding
chr7	5527156	5530601	5527156	5530601	-	ENST00000462494.5@ACTB	ENST00000462494.5	protein_coding	5530524,5529535,5528281,5528004,5527156	5530601,5529663,5529400,5528185,5527891	Gene ID= ENSG00000075624.13 TPM= 71.39 Transcript Type= retained_intron
chr7	5592823	5606655	5592823	5606655	+	ENST00000382361.7@FSCN1	ENST00000382361.7	protein_coding	5592823,5603257,5603496,5603863,5605272	5593768,5603413,5603617,5604030,5606655	Gene ID= ENSG00000075618.17 TPM= 157.63 Transcript Type= protein_coding
chr7	5620047	5781696	5620047	5781696	-	ENST00000425013.6@RNF216	ENST00000425013.6	protein_coding	5781541,5761003,5752846,5740973,5739276,5730715,5729432,5725324,5721033,5716716,5715053,5712715,5711761,5652413,5641154,5624056,5620047	5781696,5761138,5752979,5741644,5739352,5730817,5729596,5725438,5721172,5716766,5715190,5712863,5711839,5652510,5641376,5624125,5623179	Gene ID= ENSG00000011275.18 TPM= 45.92 Transcript Type= protein_coding
chr7	5622607	5781739	5622607	5781739	-	ENST00000389902.7@RNF216	ENST00000389902.7	protein_coding	5781541,5761003,5752846,5740973,5739276,5730715,5729432,5725324,5721033,5716716,5715053,5712715,5711761,5652413,5641154,5624056,5622607	5781739,5761138,5752979,5741815,5739352,5730817,5729596,5725438,5721172,5716766,5715190,5712863,5711839,5652510,5641376,5624125,5623179	Gene ID= ENSG00000011275.18 TPM= 8.56 Transcript Type= protein_coding
chr7	5622695	5761138	5622695	5761138	-	ENST00000389900.8@RNF216	ENST00000389900.8	protein_coding	5761003,5752846,5740973,5739276,5730715,5729432,5725324,5721033,5716716,5715053,5712715,5711761,5652413,5641154,5624056,5622695	5761138,5752979,5741644,5739621,5730817,5729596,5725438,5721172,5716766,5715190,5712863,5711839,5652510,5641376,5624125,5623179	Gene ID= ENSG00000011275.18 TPM= 1.55 Transcript Type= nonsense_mediated_decay
chr7	5823161	5848940	5823161	5848940	+	transcript512.chr7.nnic@ZNF815P	transcript512.chr7.nnic	transcribed_unprocessed_pseudogene	5823161,5831181,5833527,5839949,5840690,5846766,5848564	5823526,5831283,5833568,5840075,5840856,5847922,5848940	Gene ID= ENSG00000235944.8 TPM= 2.34 Transcript Type= NA
chr7	5898780	5925974	5898780	5925974	+	transcript519.chr7.nnic@CCZ1	transcript519.chr7.nnic	protein_coding	5898780,5900284,5900473,5900855,5901657,5902661,5905094,5906889,5910035,5911861,5912843,5918867,5919849,5923387,5923835,5925632	5898919,5900381,5900566,5900932,5901704,5902744,5905269,5907010,5910116,5911922,5912954,5918900,5919966,5923545,5923962,5925974	Gene ID= ENSG00000122674.11 TPM= 2.92 Transcript Type= NA
chr7	5898734	5925974	5898734	5925974	+	ENST00000325974.8@CCZ1	ENST00000325974.8	protein_coding	5898734,5900284,5900473,5900855,5901657,5902661,5905094,5910035,5911861,5912843,5918867,5919849,5923387,5923835,5925632	5898919,5900381,5900566,5900932,5901704,5902744,5905269,5910116,5911922,5912954,5918900,5919966,5923545,5923962,5925974	Gene ID= ENSG00000122674.11 TPM= 123.18 Transcript Type= protein_coding
chr7	5973239	6009125	5973239	6009125	-	ENST00000265849.11@PMS2	ENST00000265849.11	protein_coding	6008997,6005892,6003972,6003690,6002453,5999108,5997326,5995534,5991973,5989800,5986759,5982824,5978596,5977588,5973239	6009125,6006031,6004058,6003792,6002636,5999275,5997423,5995633,5992057,5989955,5987620,5982991,5978696,5977757,5973542	Gene ID= ENSG00000122512.14 TPM= 5.84 Transcript Type= protein_coding
chr7	6009245	6023834	6009245	6023834	+	ENST00000223029.7@AIMP2	ENST00000223029.7	protein_coding	6009245,6015146,6017814,6023303	6009498,6015352,6018045,6023834	Gene ID= ENSG00000106305.9 TPM= 26.85 Transcript Type= protein_coding
chr7	6009245	6023834	6009245	6023834	+	transcript542.chr7.nnic@AIMP2	transcript542.chr7.nnic	protein_coding	6009245,6015146,6017814,6023303	6009378,6015352,6018045,6023834	Gene ID= ENSG00000106305.9 TPM= 3.5 Transcript Type= NA
chr7	6109702	6110124	6109702	6110124	-	transcript547.chr7.nnic@NA	transcript547.chr7.nnic	NA	6109702	6110124	Gene ID= novel_gene_chr7_548 TPM= 3.5 Transcript Type= NA
chr7	6104884	6161564	6104884	6161564	+	ENST00000306177.9@USP42	ENST00000306177.9	protein_coding	6104884,6111125,6115323,6135841,6139092,6140128,6140914,6142932,6144085,6145516,6146148,6147739,6149583,6150412,6153756,6156754,6159450,6160555	6105032,6111374,6115523,6135951,6139194,6140195,6140984,6143014,6144196,6145656,6146248,6147892,6150302,6150506,6155195,6157055,6159493,6161564	Gene ID= ENSG00000106346.11 TPM= 2.34 Transcript Type= protein_coding
chr7	6161776	6272668	6161776	6272668	-	transcript558.chr7.nnic@CYTH3	transcript558.chr7.nnic	protein_coding	6272474,6190449,6177823,6173653,6171202,6170830,6170535,6165734,6165545,6165273,6161776	6272668,6190531,6177941,6173733,6171314,6170978,6170646,6165810,6165616,6165427,6165016	Gene ID= ENSG00000008256.15 TPM= 12.84 Transcript Type= NA
chr7	6161776	6272644	6161776	6272644	-	ENST00000350796.7@CYTH3	ENST00000350796.7	protein_coding	6272474,6190449,6187657,6187050,6177823,6173653,6171202,6170830,6170535,6165734,6165545,6165273,6161776	6272644,6190531,6187721,6187116,6177941,6173733,6171314,6170978,6170646,6165810,6165616,6165427,6165016	Gene ID= ENSG00000008256.15 TPM= 103.92 Transcript Type= protein_coding
chr7	6329411	6348949	6329411	6348949	-	transcript561.chr7.nnic@FAM220A	transcript561.chr7.nnic	protein_coding	6348472,6329411	6348949,6331235	Gene ID= ENSG00000178397.12 TPM= 4.67 Transcript Type= NA
chr7	6374523	6403977	6374523	6403977	+	ENST00000348035.8@RAC1	ENST00000348035.8	protein_coding	6374523,6387212,6391924,6400126,6401868,6402316	6374770,6387283,6392041,6400188,6402027,6403977	Gene ID= ENSG00000136238.17 TPM= 205.88 Transcript Type= protein_coding
chr7	6374539	6402520	6374539	6402520	+	ENST00000356142.4@RAC1	ENST00000356142.4	protein_coding	6374539,6387212,6391924,6398662,6400126,6401868,6402316	6374770,6387283,6392041,6398718,6400188,6402027,6402520	Gene ID= ENSG00000136238.17 TPM= 12.06 Transcript Type= protein_coding
chr7	6409129	6448012	6409129	6448012	-	ENST00000297056.10@DAGLB	ENST00000297056.10	protein_coding	6447748,6445953,6436362,6434762,6432837,6430480,6425988,6424752,6421727,6416841,6416627,6412966,6412811,6410130,6409129	6448012,6446104,6436533,6435020,6432959,6430607,6426114,6424835,6421804,6416921,6416754,6413034,6412883,6410380,6410035	Gene ID= ENSG00000164535.14 TPM= 95.74 Transcript Type= protein_coding
chr7	6437024	6443273	6437024	6443273	+	transcript588.chr7.nnic@NA	transcript588.chr7.nnic	NA	6437024,6440243,6443156	6439113,6441171,6443273	Gene ID= novel_gene_chr7_589 TPM= 2.34 Transcript Type= NA
chr7	6461081	6484242	6461081	6484242	-	ENST00000258739.8@KDELR2	ENST00000258739.8	protein_coding	6483967,6474184,6469596,6466071,6461081	6484242,6474284,6469754,6466323,6463175	Gene ID= ENSG00000136240.9 TPM= 397.86 Transcript Type= protein_coding
chr7	6577443	6588976	6577443	6588976	+	transcript608.chr7.nic@ZDHHC4	transcript608.chr7.nic	protein_coding	6577443,6577590,6578501,6580555,6581607,6582073,6583306,6585016,6588617	6577498,6577720,6578720,6580678,6581680,6582251,6583431,6585260,6588976	Gene ID= ENSG00000136247.14 TPM= 4.9 Transcript Type= NA
chr7	6577434	6588978	6577434	6588978	+	ENST00000396707.6@ZDHHC4	ENST00000396707.6	protein_coding	6577434,6577590,6578566,6580555,6581607,6582073,6583306,6585016,6588617	6577498,6577720,6578720,6580678,6581680,6582251,6583431,6585260,6588978	Gene ID= ENSG00000136247.14 TPM= 15.41 Transcript Type= protein_coding
chr7	6577434	6588978	6577434	6588978	+	ENST00000396713.6@ZDHHC4	ENST00000396713.6	protein_coding	6577434,6578566,6580555,6581607,6582073,6583306,6585016,6588617	6577720,6578720,6580678,6581680,6582251,6583431,6585260,6588978	Gene ID= ENSG00000136247.14 TPM= 15.41 Transcript Type= protein_coding
chr7	6577453	6588926	6577453	6588926	+	ENST00000335965.10@ZDHHC4	ENST00000335965.10	protein_coding	6577453,6578566,6580555,6581607,6582073,6583306,6585016,6588617	6577498,6578720,6580678,6581680,6582251,6583431,6585260,6588926	Gene ID= ENSG00000136247.14 TPM= 8.41 Transcript Type= protein_coding
chr7	6577434	6588931	6577434	6588931	+	ENST00000405731.7@ZDHHC4	ENST00000405731.7	protein_coding	6577434,6578501,6580555,6581607,6582073,6583306,6585016,6588617	6577498,6578720,6580678,6581680,6582251,6583431,6585260,6588931	Gene ID= ENSG00000136247.14 TPM= 3.74 Transcript Type= protein_coding
chr7	6577468	6588919	6577468	6588919	+	ENST00000396709.5@ZDHHC4	ENST00000396709.5	protein_coding	6577468,6578566,6580555,6581607,6582073,6583306,6585016,6588617	6577720,6578746,6580678,6581680,6582251,6583431,6585260,6588919	Gene ID= ENSG00000136247.14 TPM= 1.17 Transcript Type= protein_coding
chr7	6589556	6608724	6589556	6608724	+	transcript621.chr7.nic@C7orf26	transcript621.chr7.nic	protein_coding	6589556,6591646,6594435,6599829,6602101,6607537,6607960	6590475,6591867,6594600,6600356,6602140,6607597,6608724	Gene ID= ENSG00000146576.12 TPM= 5.84 Transcript Type= NA
chr7	6590022	6608726	6590022	6608726	+	transcript626.chr7.nnic@C7orf26	transcript626.chr7.nnic	protein_coding	6590022,6591753,6594435,6599829,6602101,6607960	6590475,6591867,6594600,6600356,6602140,6608726	Gene ID= ENSG00000146576.12 TPM= 4.09 Transcript Type= NA
chr7	6590017	6608726	6590017	6608726	+	ENST00000344417.9@C7orf26	ENST00000344417.9	protein_coding	6590017,6591646,6594435,6599829,6602101,6607960	6590475,6591867,6594600,6600356,6602140,6608726	Gene ID= ENSG00000146576.12 TPM= 35.61 Transcript Type= protein_coding
chr7	6615610	6624280	6615610	6624280	+	transcript636.chr7.nnic@ZNF853	transcript636.chr7.nnic	protein_coding	6615610,6617185,6617585,6621122	6616186,6617307,6617662,6624280	Gene ID= ENSG00000236609.3 TPM= 3.5 Transcript Type= NA
chr7	6615490	6624290	6615490	6624290	+	transcript640.chr7.nnic@ZNF853	transcript640.chr7.nnic	protein_coding	6615490,6617185,6621122	6616186,6617307,6624290	Gene ID= ENSG00000236609.3 TPM= 22.18 Transcript Type= NA
chr7	6615617	6624290	6615617	6624290	+	ENST00000457543.3@ZNF853	ENST00000457543.3	protein_coding	6615617,6617190,6621122	6616186,6617307,6624290	Gene ID= ENSG00000236609.3 TPM= 43.2 Transcript Type= protein_coding
chr7	6637303	6656432	6637303	6656432	+	transcript632.chr7.nic@ZNF316	transcript632.chr7.nic	protein_coding	6637303,6637846,6639042,6641825,6642964,6643822,6644480,6652303	6637447,6638009,6639141,6642764,6643073,6643948,6644593,6656432	Gene ID= ENSG00000205903.6 TPM= 6.22 Transcript Type= NA
chr7	6637759	6656432	6637759	6656432	+	transcript634.chr7.nic@ZNF316	transcript634.chr7.nic	protein_coding	6637759,6641825,6642382,6642964,6643822,6644480,6652303	6639141,6641962,6642764,6643073,6643948,6644593,6656432	Gene ID= ENSG00000205903.6 TPM= 2.72 Transcript Type= NA
chr7	6637322	6656432	6637322	6656432	+	ENST00000382252.5@ZNF316	ENST00000382252.5	protein_coding	6637322,6637846,6639042,6641825,6642382,6642964,6643822,6644480,6652303	6637447,6638009,6639141,6641962,6642764,6643073,6643948,6644593,6656432	Gene ID= ENSG00000205903.6 TPM= 92.63 Transcript Type= protein_coding
chr7	6688433	6706923	6688433	6706923	-	ENST00000405858.5@ZNF12	ENST00000405858.5	protein_coding	6706432,6705159,6697685,6697339,6688433	6706923,6705223,6697811,6697434,6692703	Gene ID= ENSG00000164631.18 TPM= 14.01 Transcript Type= protein_coding
chr7	6699778	6701969	6699778	6701969	+	transcript650.chr7.nnic@NA	transcript650.chr7.nnic	NA	6699778	6701969	Gene ID= novel_gene_chr7_651 TPM= 7.01 Transcript Type= NA
chr7	6950450	6953970	6950450	6953970	-	transcript669.chr7.nnic@NA	transcript669.chr7.nnic	NA	6950450	6953970	Gene ID= novel_gene_chr7_670 TPM= 4.67 Transcript Type= NA
chr7	7182647	7244350	7182647	7244350	+	transcript674.chr7.nnic@C1GALT1	transcript674.chr7.nnic	protein_coding	7182647,7215042,7234303,7238255,7243524	7182820,7215239,7234539,7238922,7244350	Gene ID= ENSG00000106392.10 TPM= 2.34 Transcript Type= NA
chr7	7182615	7248647	7182615	7248647	+	ENST00000436587.6@C1GALT1	ENST00000436587.6	protein_coding	7182615,7234303,7238255,7243524	7182820,7234539,7238922,7248647	Gene ID= ENSG00000106392.10 TPM= 4.67 Transcript Type= protein_coding
chr7	7551103	7566515	7551103	7566515	-	transcript708.chr7.nnic@AC004982.2	transcript708.chr7.nnic	lincRNA	7566449,7565914,7555156,7552159,7551103	7566515,7566054,7555189,7552922,7551476	Gene ID= ENSG00000272894.5 TPM= 2.34 Transcript Type= NA
chr7	7552462	7566996	7552462	7566996	-	ENST00000609497.5@AC004982.2	ENST00000609497.5	lincRNA	7565914,7555156,7552462	7566996,7555189,7552922	Gene ID= ENSG00000272894.5 TPM= 3.5 Transcript Type= lincRNA
chr7	7566884	7607496	7566884	7607496	+	transcript681.chr7.nnic@MIOS	transcript681.chr7.nnic	protein_coding	7566884,7567607,7568026,7572436,7574098,7582630,7583118,7585636,7588498,7589405,7594980,7596257,7605942,7606996	7567072,7567688,7568123,7573769,7574196,7582819,7583372,7585805,7588563,7589563,7595132,7596461,7606071,7607496	Gene ID= ENSG00000164654.15 TPM= 2.34 Transcript Type= NA
chr7	7566872	7607496	7566872	7607496	+	ENST00000340080.8@MIOS	ENST00000340080.8	protein_coding	7566872,7567607,7568026,7572436,7574098,7583118,7585636,7588498,7589405,7594980,7596257,7605942,7606996	7567072,7567688,7568123,7573769,7574196,7583372,7585805,7588563,7589563,7595132,7596461,7606071,7607496	Gene ID= ENSG00000164654.15 TPM= 5.84 Transcript Type= protein_coding
chr7	7566875	7607223	7566875	7607223	+	ENST00000405785.5@MIOS	ENST00000405785.5	protein_coding	7566875,7568026,7572436,7574098,7583118,7585636,7588498,7589405,7594980,7596257,7605942,7606996	7567072,7568123,7573769,7574196,7583372,7585805,7588563,7589563,7595132,7596461,7606071,7607223	Gene ID= ENSG00000164654.15 TPM= 1.17 Transcript Type= protein_coding
chr7	7566883	7607496	7566883	7607496	+	transcript689.chr7.nic@MIOS	transcript689.chr7.nic	protein_coding	7566883,7568026,7572436,7574098,7583118,7585636,7588498,7589405,7594980,7596257,7605942,7606996	7567688,7568123,7573769,7574196,7583372,7585805,7588563,7589563,7595132,7596461,7606071,7607496	Gene ID= ENSG00000164654.15 TPM= 2.34 Transcript Type= NA
chr7	7566884	7607496	7566884	7607496	+	transcript692.chr7.nnic@MIOS	transcript692.chr7.nnic	protein_coding	7566884,7567607,7572436,7574098,7583118,7585636,7588498,7589405,7594980,7596257,7605942,7606996	7567072,7567688,7573769,7574196,7583372,7585805,7588563,7589563,7595132,7596461,7606071,7607496	Gene ID= ENSG00000164654.15 TPM= 2.34 Transcript Type= NA
chr7	7566872	7607496	7566872	7607496	+	transcript697.chr7.nic@MIOS	transcript697.chr7.nic	protein_coding	7566872,7572436,7574098,7583118,7585636,7588498,7589405,7594980,7596257,7605942,7606996	7567072,7573769,7574196,7583372,7585805,7588563,7589563,7595132,7596461,7606071,7607496	Gene ID= ENSG00000164654.15 TPM= 7.01 Transcript Type= NA
chr7	7566993	7607496	7566993	7607496	+	transcript700.chr7.nnic@MIOS	transcript700.chr7.nnic	protein_coding	7566993,7572436,7574098,7583118,7585636,7588498,7589405,7594980,7596257,7605942,7606996	7567688,7573769,7574196,7583372,7585805,7588563,7589563,7595132,7596461,7606071,7607496	Gene ID= ENSG00000164654.15 TPM= 2.34 Transcript Type= NA
chr7	7636518	7718607	7636518	7718607	-	ENST00000223129.8@RPA3	ENST00000223129.8	protein_coding	7718515,7715175,7687228,7685830,7640320,7639070,7637864,7636518	7718607,7715226,7687328,7685998,7641175,7639144,7637972,7637082	Gene ID= ENSG00000106399.11 TPM= 7.01 Transcript Type= protein_coding
chr7	7640708	7721229	7640708	7721229	+	transcript731.chr7.nnic@UMAD1	transcript731.chr7.nnic	protein_coding	7640708,7673316,7676102,7720913	7640821,7673453,7676208,7721229	Gene ID= ENSG00000219545.11 TPM= 2.34 Transcript Type= NA
chr7	7640708	7748420	7640708	7748420	+	transcript739.chr7.nnic@UMAD1	transcript739.chr7.nnic	protein_coding	7640708,7673316,7747994	7640821,7673453,7748420	Gene ID= ENSG00000219545.11 TPM= 2.34 Transcript Type= NA
chr7	7640776	7879185	7640776	7879185	+	ENST00000636849.1@UMAD1	ENST00000636849.1	protein_coding	7640776,7673322,7801670,7877281	7640821,7673453,7801743,7879185	Gene ID= ENSG00000219545.11 TPM= 26.85 Transcript Type= protein_coding
chr7	7640794	7968020	7640794	7968020	+	ENST00000482067.3@UMAD1	ENST00000482067.3	protein_coding	7640794,7673309,7801670,7967699	7640821,7673453,7801743,7968020	Gene ID= ENSG00000219545.11 TPM= 1.17 Transcript Type= protein_coding
chr7	7640784	7879205	7640784	7879205	+	ENST00000639110.1@UMAD1	ENST00000639110.1	protein_coding	7640784,7673309,7801670,7868330,7877281	7640821,7673453,7801743,7868533,7879205	Gene ID= ENSG00000219545.11 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr7	7685316	7689010	7685316	7689010	-	transcript747.chr7.nnic@NA	transcript747.chr7.nnic	NA	7685316	7689010	Gene ID= novel_gene_chr7_748 TPM= 2.34 Transcript Type= NA
chr7	7806245	7811078	7806245	7811078	-	transcript749.chr7.nnic@NA	transcript749.chr7.nnic	NA	7806245	7811078	Gene ID= novel_gene_chr7_750 TPM= 2.34 Transcript Type= NA
chr7	7968794	8089080	7968794	8089080	+	ENST00000223145.9@GLCCI1	ENST00000223145.9	protein_coding	7968794,8003908,8022483,8055433,8060096,8070921,8084897,8086193	7969807,8004059,8022569,8055549,8060248,8071131,8085017,8089080	Gene ID= ENSG00000106415.12 TPM= 15.18 Transcript Type= protein_coding
chr7	8113184	8262281	8113184	8262281	-	ENST00000402384.7@ICA1	ENST00000402384.7	protein_coding	8262094,8235910,8232590,8228601,8221275,8218305,8158527,8157116,8143875,8141765,8138985,8138840,8127873,8113184	8262281,8236005,8232755,8228673,8221398,8218503,8158652,8157214,8143972,8141817,8139047,8138881,8128142,8114044	Gene ID= ENSG00000003147.17 TPM= 11.68 Transcript Type= protein_coding
chr7	8113187	8262612	8113187	8262612	-	ENST00000406470.6@ICA1	ENST00000406470.6	protein_coding	8262440,8235910,8232590,8228601,8221275,8218305,8158527,8157116,8143875,8141765,8138985,8138840,8127873,8113187	8262612,8236005,8232755,8228673,8221398,8218503,8158652,8157214,8143972,8141817,8139047,8138881,8128142,8114044	Gene ID= ENSG00000003147.17 TPM= 5.84 Transcript Type= protein_coding
chr7	8113772	8262154	8113772	8262154	-	transcript760.chr7.nic@ICA1	transcript760.chr7.nic	protein_coding	8262000,8235910,8232590,8228601,8221275,8218305,8158527,8157116,8143875,8141765,8138985,8138840,8127873,8113772	8262154,8236005,8232755,8228673,8221398,8218503,8158652,8157214,8143972,8141817,8139047,8138881,8128142,8114044	Gene ID= ENSG00000003147.17 TPM= 3.5 Transcript Type= NA
chr7	8113772	8262174	8113772	8262174	-	transcript763.chr7.nic@ICA1	transcript763.chr7.nic	protein_coding	8262094,8235910,8232590,8228601,8221275,8218305,8157116,8143875,8141765,8138985,8138840,8127873,8113772	8262174,8236005,8232755,8228673,8221398,8218503,8158652,8143972,8141817,8139047,8138881,8128142,8114044	Gene ID= ENSG00000003147.17 TPM= 3.5 Transcript Type= NA
chr7	8124112	8262596	8124112	8262596	-	transcript764.chr7.nic@ICA1	transcript764.chr7.nic	protein_coding	8262440,8235910,8232590,8228601,8221275,8218305,8158527,8157116,8143875,8141765,8138985,8138840,8124112	8262596,8236005,8232755,8228673,8221398,8218503,8158652,8157214,8143972,8141817,8139047,8138881,8128142	Gene ID= ENSG00000003147.17 TPM= 2.34 Transcript Type= NA
chr7	8113774	8119657	8113774	8119657	-	transcript770.chr7.nnic@NA	transcript770.chr7.nnic	NA	8113774	8119657	Gene ID= novel_gene_chr7_771 TPM= 2.34 Transcript Type= NA
chr7	8262233	8262821	8262233	8262821	+	ENST00000458624.1@AC007009.1	ENST00000458624.1	antisense_RNA	8262233,8262580	8262419,8262821	Gene ID= ENSG00000244239.1 TPM= 1.17 Transcript Type= antisense_RNA
chr7	10973854	10982622	10973854	10982622	+	transcript780.chr7.nic@PHF14	transcript780.chr7.nic	protein_coding	10973854,10974835,10982372	10974324,10974945,10982622	Gene ID= ENSG00000106443.15 TPM= 10.51 Transcript Type= NA
chr7	10973904	11169630	10973904	11169630	+	ENST00000634607.1@PHF14	ENST00000634607.1	protein_coding	10973904,10974835,10982372,10990703,11013747,11022868,11028681,11035640,11036418,11036985,11038760,11040672,11042683,11051612,11061791,11061964,11111350,11169416	10974324,10974945,10983159,10990847,11013906,11022979,11028818,11035786,11036688,11037091,11038855,11040775,11042814,11051780,11061841,11062085,11111467,11169630	Gene ID= ENSG00000106443.15 TPM= 14.01 Transcript Type= protein_coding
chr7	10973889	11169623	10973889	11169623	+	ENST00000423760.6@PHF14	ENST00000423760.6	protein_coding	10973889,10974835,10990703,11013747,11022868,11028681,11035640,11036418,11036985,11038760,11040672,11042683,11051612,11061791,11061964,11111350,11169416	10974324,10974945,10990847,11013906,11022979,11028818,11035786,11036688,11037091,11038855,11040775,11042814,11051780,11061841,11062085,11111467,11169623	Gene ID= ENSG00000106443.15 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr7	10973872	11103655	10973872	11103655	+	ENST00000403050.7@PHF14	ENST00000403050.7	protein_coding	10973872,10974835,10982372,10990703,11013747,11022868,11028681,11035640,11036418,11036985,11038760,11040672,11042683,11051612,11061791,11061964,11102486	10974324,10974945,10983159,10990847,11013906,11022979,11028818,11035786,11036688,11037091,11038855,11040775,11042814,11051780,11061841,11062085,11103655	Gene ID= ENSG00000106443.15 TPM= 1.17 Transcript Type= protein_coding
chr7	11447229	11832008	11447229	11832008	-	transcript783.chr7.nic@THSD7A	transcript783.chr7.nic	protein_coding	11831757,11636130,11593254,11590460,11542962,11541419,11481788,11474334,11469879,11462011,11460662,11447229	11832008,11636961,11593502,11590641,11543117,11541631,11481982,11474568,11469994,11462143,11460765,11447424	Gene ID= ENSG00000005108.15 TPM= 2.34 Transcript Type= NA
chr7	11632459	11636802	11632459	11636802	-	transcript784.chr7.nnic@NA	transcript784.chr7.nnic	NA	11632459	11636802	Gene ID= novel_gene_chr7_785 TPM= 2.34 Transcript Type= NA
chr7	12211241	12233089	12211241	12233089	+	ENST00000396668.7@TMEM106B	ENST00000396668.7	protein_coding	12211241,12214809,12218458,12224226,12229679,12230389,12231062,12231837	12211425,12215027,12218521,12224385,12229819,12230438,12231115,12233089	Gene ID= ENSG00000106460.18 TPM= 10.51 Transcript Type= protein_coding
chr7	12211330	12237258	12211330	12237258	+	transcript796.chr7.nic@TMEM106B	transcript796.chr7.nic	protein_coding	12211330,12214809,12218458,12224226,12229679,12230389,12231062,12231837	12211547,12215027,12218521,12224385,12229819,12230438,12231115,12237258	Gene ID= ENSG00000106460.18 TPM= 4.67 Transcript Type= NA
chr7	12570721	12653603	12570721	12653603	+	transcript802.chr7.nnic@SCIN	transcript802.chr7.nnic	protein_coding	12570721,12578064,12581060,12604514,12622801,12625010,12625762,12626584,12629101,12636045,12640347,12644138,12644584,12649467,12651841,12652588,12653101	12570985,12578218,12581221,12604663,12622893,12625142,12625850,12626799,12629222,12636135,12640517,12644315,12644705,12649544,12651901,12652958,12653603	Gene ID= ENSG00000006747.14 TPM= 7.01 Transcript Type= NA
chr7	13891228	13989946	13891228	13989946	-	ENST00000430479.5@ETV1	ENST00000430479.5	protein_coding	13989563,13989268,13989008,13988086,13986638,13977427,13939117,13935708,13931502,13911239,13909632,13906430,13900738,13891228	13989946,13989464,13989139,13988173,13986685,13977480,13939246,13935896,13931749,13911307,13909700,13906599,13900839,13896087	Gene ID= ENSG00000006468.13 TPM= 2.92 Transcript Type= protein_coding
chr7	13894381	13989947	13894381	13989947	-	ENST00000405218.6@ETV1	ENST00000405218.6	protein_coding	13989563,13989008,13988086,13986638,13977427,13939117,13935708,13931502,13911239,13909632,13906430,13900738,13894381	13989947,13989139,13988173,13986685,13977480,13939246,13935896,13931749,13911307,13909700,13906599,13900839,13896087	Gene ID= ENSG00000006468.13 TPM= 5.25 Transcript Type= protein_coding
chr7	13893268	13988894	13893268	13988894	-	transcript828.chr7.nnic@ETV1	transcript828.chr7.nnic	protein_coding	13988814,13988086,13986638,13977427,13939117,13935708,13931502,13911239,13909632,13906430,13900738,13893268	13988894,13988173,13986685,13977480,13939246,13935896,13931749,13911307,13909700,13906599,13900839,13896087	Gene ID= ENSG00000006468.13 TPM= 10.89 Transcript Type= NA
chr7	13894155	13988873	13894155	13988873	-	transcript833.chr7.nic@ETV1	transcript833.chr7.nic	protein_coding	13988086,13986638,13977427,13939117,13935708,13931502,13911239,13909632,13906430,13900738,13894155	13988873,13986685,13977480,13939246,13935896,13931749,13911307,13909700,13906599,13900839,13896087	Gene ID= ENSG00000006468.13 TPM= 2.34 Transcript Type= NA
chr7	13893268	13988873	13893268	13988873	-	ENST00000405358.8@ETV1	ENST00000405358.8	protein_coding	13988680,13988086,13986638,13977427,13939117,13935708,13931502,13911239,13909632,13906430,13900738,13893268	13988873,13988173,13986685,13977480,13939246,13935896,13931749,13911307,13909700,13906599,13900839,13896087	Gene ID= ENSG00000006468.13 TPM= 12.84 Transcript Type= protein_coding
chr7	15611212	15686812	15611212	15686812	-	ENST00000262041.5@MEOX2	ENST00000262041.5	protein_coding	15685886,15626746,15611212	15686812,15626918,15612611	Gene ID= ENSG00000106511.5 TPM= 33.86 Transcript Type= protein_coding
chr7	16461481	16465849	16461481	16465849	-	ENST00000307068.4@SOSTDC1	ENST00000307068.4	protein_coding	16465464,16461481	16465849,16462963	Gene ID= ENSG00000171243.7 TPM= 2.34 Transcript Type= protein_coding
chr7	16599776	16645817	16599776	16645817	-	ENST00000306999.6@ANKMY2	ENST00000306999.6	protein_coding	16645507,16636391,16627040,16624983,16615744,16610549,16609630,16604721,16602380,16599776	16645817,16636455,16627178,16625081,16615904,16610763,16609765,16604849,16602509,16600945	Gene ID= ENSG00000106524.8 TPM= 21.02 Transcript Type= protein_coding
chr7	16646131	16706523	16646131	16706523	+	ENST00000258761.7@BZW2	ENST00000258761.7	protein_coding	16646131,16665437,16674412,16681301,16682780,16685905,16689797,16694834,16696915,16698048,16704547,16706060	16646288,16665501,16674588,16681404,16682845,16686040,16689906,16695004,16697061,16698186,16704669,16706523	Gene ID= ENSG00000136261.14 TPM= 27.24 Transcript Type= protein_coding
chr7	16646134	16706512	16646134	16706512	+	ENST00000433922.6@BZW2	ENST00000433922.6	protein_coding	16646134,16665437,16674412,16681301,16682780,16685905,16689797,16694834,16696915,16698048,16704547,16706060	16646304,16665501,16674588,16681404,16682845,16686040,16689906,16695004,16697061,16698186,16704669,16706512	Gene ID= ENSG00000136261.14 TPM= 10.89 Transcript Type= protein_coding
chr7	16646134	16706523	16646134	16706523	+	ENST00000630952.2@BZW2	ENST00000630952.2	protein_coding	16646134,16665437,16674412,16681301,16682780,16689797,16694834,16696915,16698048,16704547,16706060	16646288,16665501,16674588,16681404,16682845,16689906,16695004,16697061,16698186,16704669,16706523	Gene ID= ENSG00000136261.14 TPM= 2.72 Transcript Type= protein_coding
chr7	16646195	16706481	16646195	16706481	+	ENST00000405202.5@BZW2	ENST00000405202.5	protein_coding	16646195,16674412,16681301,16682780,16685905,16689797,16694834,16696915,16698048,16704547,16706060	16646288,16674588,16681404,16682845,16686040,16689906,16695004,16697061,16698186,16704669,16706481	Gene ID= ENSG00000136261.14 TPM= 1.17 Transcript Type= protein_coding
chr7	16753535	16784536	16753535	16784536	+	ENST00000262067.4@TSPAN13	ENST00000262067.4	protein_coding	16753535,16776211,16777042,16777798,16779003,16783417	16754030,16776378,16777122,16777911,16779116,16784536	Gene ID= ENSG00000106537.7 TPM= 449.52 Transcript Type= protein_coding
chr7	16792640	16805121	16792640	16805121	-	transcript862.chr7.nic@AGR2	transcript862.chr7.nic	protein_coding	16804953,16801658,16801320,16801151,16799744,16797631,16794936,16792640	16805121,16801803,16801383,16801203,16799817,16797694,16795019,16792957	Gene ID= ENSG00000106541.11 TPM= 14.01 Transcript Type= NA
chr7	16859405	16881987	16859405	16881987	-	ENST00000310398.6@AGR3	ENST00000310398.6	protein_coding	16881944,16878510,16873780,16862610,16861984,16861384,16860500,16859405	16881987,16878645,16873843,16862662,16862060,16861447,16860583,16859631	Gene ID= ENSG00000173467.8 TPM= 18.68 Transcript Type= protein_coding
chr7	16859405	16882030	16859405	16882030	-	transcript865.chr7.nic@AGR3	transcript865.chr7.nic	protein_coding	16881944,16873780,16862610,16861984,16861384,16860500,16859405	16882030,16873843,16862662,16862060,16861447,16860583,16859631	Gene ID= ENSG00000173467.8 TPM= 5.84 Transcript Type= NA
chr7	17298559	17345766	17298559	17345766	+	transcript871.chr7.nnic@AHR	transcript871.chr7.nnic	protein_coding	17298559,17309936,17322501,17327759,17329952,17330756,17333912,17334887,17335645,17338986,17342921,17345134	17299329,17310123,17322607,17327848,17330075,17330886,17334114,17334996,17335786,17340228,17344596,17345766	Gene ID= ENSG00000106546.12 TPM= 2.8 Transcript Type= NA
chr7	17298652	17345767	17298652	17345767	+	transcript872.chr7.nnic@AHR	transcript872.chr7.nnic	protein_coding	17298652,17309936,17322501,17327759,17329952,17330756,17333912,17334887,17335645,17338986,17342921,17345276	17299329,17310123,17322607,17327848,17330075,17330886,17334114,17334996,17335786,17340228,17344665,17345767	Gene ID= ENSG00000106546.12 TPM= 2.8 Transcript Type= NA
chr7	17298559	17346150	17298559	17346150	+	transcript875.chr7.nnic@AHR	transcript875.chr7.nnic	protein_coding	17298559,17309936,17322501,17327759,17329952,17330756,17333912,17334887,17335645,17338986,17342921,17345178	17299329,17310123,17322607,17327848,17330075,17330886,17334114,17334996,17335786,17340228,17344776,17346150	Gene ID= ENSG00000106546.12 TPM= 25.57 Transcript Type= NA
chr7	17298622	17346150	17298622	17346150	+	ENST00000242057.8@AHR	ENST00000242057.8	protein_coding	17298622,17309936,17322501,17327759,17329952,17330756,17333912,17334887,17335645,17338986,17342921	17299329,17310123,17322607,17327848,17330075,17330886,17334114,17334996,17335786,17340228,17346150	Gene ID= ENSG00000106546.12 TPM= 10.39 Transcript Type= protein_coding
chr7	17298675	17302809	17298675	17302809	+	transcript891.chr7.nnic@NA	transcript891.chr7.nnic	NA	17298675	17302809	Gene ID= novel_gene_chr7_892 TPM= 5.84 Transcript Type= NA
chr7	17790761	17940503	17790761	17940503	-	transcript903.chr7.nic@SNX13	transcript903.chr7.nic	protein_coding	17940284,17897334,17893332,17891546,17890363,17875669,17875480,17873528,17868407,17850826,17850347,17845595,17839807,17834761,17834052,17830010,17826022,17821509,17816182,17814834,17803419,17801588,17799009,17798690,17796827,17790761	17940503,17897446,17893434,17891635,17890484,17875790,17875581,17873616,17868490,17850964,17850435,17845694,17840000,17834865,17834184,17830047,17826091,17821681,17816289,17814944,17803580,17801659,17799154,17798758,17796939,17794292	Gene ID= ENSG00000071189.21 TPM= 2.34 Transcript Type= NA
chr7	17790761	17940494	17790761	17940494	-	ENST00000428135.7@SNX13	ENST00000428135.7	protein_coding	17940284,17897334,17893332,17891546,17890363,17875669,17875480,17873528,17868407,17850826,17850347,17845595,17839807,17834761,17834052,17830010,17826022,17821509,17816182,17814834,17803419,17801588,17799009,17798690,17796827,17790761	17940494,17897446,17893434,17891635,17890484,17875790,17875581,17873616,17868490,17850964,17850435,17845694,17840000,17834865,17834184,17830047,17826091,17821648,17816289,17814944,17803580,17801659,17799154,17798758,17796939,17794292	Gene ID= ENSG00000071189.21 TPM= 28.02 Transcript Type= protein_coding
chr7	19695462	19709087	19695462	19709087	-	ENST00000222567.5@TWISTNB	ENST00000222567.5	protein_coding	19708763,19704779,19700072,19695462	19709087,19704920,19700280,19698727	Gene ID= ENSG00000105849.5 TPM= 32.69 Transcript Type= protein_coding
chr7	20002765	20003247	20002765	20003247	+	ENST00000396599.2@RPL21P75	ENST00000396599.2	processed_pseudogene	20002765	20003247	Gene ID= ENSG00000213860.4 TPM= 38.53 Transcript Type= processed_pseudogene
chr7	20134655	20217390	20134655	20217390	-	ENST00000400331.9@MACC1	ENST00000400331.9	protein_coding	20217299,20170714,20164256,20161748,20158204,20154193,20134655	20217390,20170778,20164399,20161870,20160245,20154381,20141158	Gene ID= ENSG00000183742.12 TPM= 2.34 Transcript Type= protein_coding
chr7	20360350	20363144	20360350	20363144	-	transcript942.chr7.nnic@NA	transcript942.chr7.nnic	NA	20360350	20363144	Gene ID= novel_gene_chr7_943 TPM= 2.34 Transcript Type= NA
chr7	21900901	21946084	21900901	21946084	-	ENST00000406877.7@CDCA7L	ENST00000406877.7	protein_coding	21945781,21916754,21911617,21908130,21906568,21906289,21905506,21904110,21902978,21900901	21946084,21916894,21911754,21908507,21906639,21906456,21905631,21904259,21903114,21902352	Gene ID= ENSG00000164649.19 TPM= 68.89 Transcript Type= protein_coding
chr7	21900900	21945878	21900900	21945878	-	ENST00000356195.9@CDCA7L	ENST00000356195.9	protein_coding	21945781,21940262,21916754,21911617,21908130,21906568,21906289,21905506,21904110,21902978,21900900	21945878,21940315,21916894,21911754,21908507,21906639,21906456,21905631,21904259,21903114,21902352	Gene ID= ENSG00000164649.19 TPM= 4.67 Transcript Type= protein_coding
chr7	21901799	21945884	21901799	21945884	-	ENST00000373934.4@CDCA7L	ENST00000373934.4	protein_coding	21945781,21916754,21908130,21906568,21906289,21905506,21904110,21902978,21901799	21945884,21916894,21908507,21906639,21906456,21905631,21904259,21903114,21902352	Gene ID= ENSG00000164649.19 TPM= 2.34 Transcript Type= protein_coding
chr7	22164012	22167069	22164012	22167069	-	transcript969.chr7.nnic@NA	transcript969.chr7.nnic	NA	22164012	22167069	Gene ID= novel_gene_chr7_970 TPM= 2.34 Transcript Type= NA
chr7	22563337	22573996	22563337	22573996	+	ENST00000435127.1@AC002480.2	ENST00000435127.1	antisense_RNA	22563337,22564966,22571775,22572085	22563430,22565152,22572013,22573996	Gene ID= ENSG00000232759.1 TPM= 1.17 Transcript Type= antisense_RNA
chr7	22812971	22822852	22812971	22822852	-	transcript974.chr7.nnic@TOMM7	transcript974.chr7.nnic	protein_coding	22822729,22818000,22812971	22822852,22818048,22813185	Gene ID= ENSG00000196683.10 TPM= 10.51 Transcript Type= NA
chr7	22812628	22822849	22812628	22822849	-	ENST00000463284.2@TOMM7	ENST00000463284.2	protein_coding	22822677,22812628	22822849,22813185	Gene ID= ENSG00000196683.10 TPM= 3.5 Transcript Type= processed_transcript
chr7	22934211	23014129	22934211	23014129	-	ENST00000432176.6@FAM126A	ENST00000432176.6	protein_coding	23013925,22991061,22983944,22978269,22977341,22976693,22976210,22964415,22961235,22960256,22934211	23014129,22991139,22984045,22978448,22977421,22976808,22976305,22964531,22961322,22960415,22946163	Gene ID= ENSG00000122591.11 TPM= 3.5 Transcript Type= protein_coding
chr7	22944509	23014084	22944509	23014084	-	ENST00000409923.5@FAM126A	ENST00000409923.5	protein_coding	23013925,22991061,22983944,22978269,22977341,22976693,22976210,22964415,22961235,22960256,22946952,22944509	23014084,22991139,22984045,22978448,22977421,22976808,22976305,22964531,22961322,22960415,22947247,22946163	Gene ID= ENSG00000122591.11 TPM= 2.34 Transcript Type= protein_coding
chr7	22978164	23014074	22978164	23014074	-	ENST00000409763.1@FAM126A	ENST00000409763.1	protein_coding	23013925,22991061,22983944,22978164	23014074,22991139,22984045,22978448	Gene ID= ENSG00000122591.11 TPM= 1.17 Transcript Type= protein_coding
chr7	23105758	23175302	23105758	23175302	+	ENST00000521082.5@KLHL7	ENST00000521082.5	protein_coding	23105758,23117834,23123777,23124688,23125048,23140769,23143851,23152067,23165698,23167836,23172948,23174015	23106146,23117964,23123879,23124781,23125172,23140944,23144025,23152209,23165938,23168037,23173045,23175302	Gene ID= ENSG00000122550.17 TPM= 4.67 Transcript Type= nonsense_mediated_decay
chr7	23105762	23156512	23105762	23156512	+	transcript999.chr7.nic@KLHL7	transcript999.chr7.nic	protein_coding	23105762,23123777,23124688,23125048,23140769,23143851,23152067,23155991	23106146,23123879,23124781,23125172,23140944,23144025,23152209,23156512	Gene ID= ENSG00000122550.17 TPM= 2.34 Transcript Type= NA
chr7	23105785	23126045	23105785	23126045	+	ENST00000322275.9@KLHL7	ENST00000322275.9	protein_coding	23105785,23123777,23124688,23125048,23125761	23106146,23123879,23124781,23125172,23126045	Gene ID= ENSG00000122550.17 TPM= 1.17 Transcript Type= protein_coding
chr7	23182083	23201006	23182083	23201006	+	transcript1006.chr7.nnic@NUPL2	transcript1006.chr7.nnic	protein_coding	23182083,23185070,23187052,23192977,23195839,23196680,23199458,23200168	23182206,23185298,23187146,23193051,23195915,23196766,23199542,23201006	Gene ID= ENSG00000136243.16 TPM= 2.34 Transcript Type= NA
chr7	23181827	23201009	23181827	23201009	+	ENST00000258742.9@NUPL2	ENST00000258742.9	protein_coding	23181827,23185070,23187052,23195839,23196680,23199458,23200168	23182206,23185298,23187146,23195915,23196766,23199542,23201009	Gene ID= ENSG00000136243.16 TPM= 21.02 Transcript Type= protein_coding
chr7	23246563	23275108	23246563	23275108	+	ENST00000258733.8@GPNMB	ENST00000258733.8	protein_coding	23246563,23253307,23254169,23256892,23259980,23260456,23266517,23267886,23269967,23273521,23274065	23246927,23253459,23254312,23257065,23260138,23260773,23266615,23267988,23270175,23273614,23275108	Gene ID= ENSG00000136235.15 TPM= 345.14 Transcript Type= protein_coding
chr7	23246697	23275107	23246697	23275107	+	ENST00000381990.6@GPNMB	ENST00000381990.6	protein_coding	23246697,23253307,23254169,23256892,23259980,23260456,23266481,23267886,23269967,23273521,23274065	23246927,23253459,23254312,23257065,23260138,23260773,23266615,23267988,23270175,23273614,23275107	Gene ID= ENSG00000136235.15 TPM= 133.81 Transcript Type= protein_coding
chr7	23246709	23258048	23246709	23258048	+	ENST00000409458.3@GPNMB	ENST00000409458.3	protein_coding	23246709,23253307,23254169,23256892	23246927,23253459,23254312,23258048	Gene ID= ENSG00000136235.15 TPM= 37.36 Transcript Type= protein_coding
chr7	23299200	23311729	23299200	23311729	+	ENST00000466681.1@MALSU1	ENST00000466681.1	protein_coding	23299200,23300839,23307868,23309356	23299608,23301017,23307949,23311729	Gene ID= ENSG00000156928.4 TPM= 24.52 Transcript Type= protein_coding
chr7	23305629	23309573	23305629	23309573	+	transcript1038.chr7.nnic@NA	transcript1038.chr7.nnic	NA	23305629	23309573	Gene ID= novel_gene_chr7_1039 TPM= 2.34 Transcript Type= NA
chr7	23490473	23491364	23490473	23491364	+	ENST00000439199.1@RPS2P32	ENST00000439199.1	processed_pseudogene	23490473	23491364	Gene ID= ENSG00000232818.2 TPM= 2.34 Transcript Type= processed_pseudogene
chr7	23504784	23532041	23504784	23532041	-	ENST00000392502.8@TRA2A	ENST00000392502.8	protein_coding	23531789,23531181,23522132,23521707,23516363,23512894,23507420,23506138,23505746,23504784	23532041,23531270,23522432,23521840,23516528,23513082,23507535,23506266,23505810,23505569	Gene ID= ENSG00000164548.10 TPM= 2.34 Transcript Type= protein_coding
chr7	23504784	23532041	23504784	23532041	-	ENST00000538367.5@TRA2A	ENST00000538367.5	protein_coding	23531789,23522132,23521707,23516363,23512894,23507420,23506138,23505746,23504784	23532041,23522432,23521840,23516528,23513082,23507535,23506266,23505813,23505569	Gene ID= ENSG00000164548.10 TPM= 5.84 Transcript Type= protein_coding
chr7	23504780	23532041	23504780	23532041	-	ENST00000297071.8@TRA2A	ENST00000297071.8	protein_coding	23531789,23521707,23516363,23512894,23507420,23506138,23505746,23504780	23532041,23521840,23516528,23513082,23507535,23506266,23505813,23505569	Gene ID= ENSG00000164548.10 TPM= 15.18 Transcript Type= protein_coding
chr7	23504780	23532003	23504780	23532003	-	transcript1049.chr7.nic@TRA2A	transcript1049.chr7.nic	protein_coding	23531789,23521707,23516363,23512894,23507420,23506138,23505746,23504780	23532003,23522432,23516528,23513082,23507535,23506266,23505813,23505569	Gene ID= ENSG00000164548.10 TPM= 5.84 Transcript Type= NA
chr7	23529855	23531988	23529855	23531988	-	transcript1054.chr7.nnic@NA	transcript1054.chr7.nnic	NA	23529855	23531988	Gene ID= novel_gene_chr7_1055 TPM= 3.5 Transcript Type= NA
chr7	23597379	23644708	23597379	23644708	+	ENST00000307471.7@CCDC126	ENST00000307471.7	protein_coding	23597379,23597967,23611171,23642931	23597605,23598051,23611553,23644708	Gene ID= ENSG00000169193.11 TPM= 16.35 Transcript Type= protein_coding
chr7	23597709	23644708	23597709	23644708	+	transcript1064.chr7.nic@CCDC126	transcript1064.chr7.nic	protein_coding	23597709,23611171,23642931	23598051,23611553,23644708	Gene ID= ENSG00000169193.11 TPM= 2.34 Transcript Type= NA
chr7	23597442	23644707	23597442	23644707	+	ENST00000409765.5@CCDC126	ENST00000409765.5	protein_coding	23597442,23611171,23642931	23597605,23611553,23644707	Gene ID= ENSG00000169193.11 TPM= 1.17 Transcript Type= protein_coding
chr7	23679601	23680837	23679601	23680837	-	transcript1076.chr7.nnic@NA	transcript1076.chr7.nnic	NA	23679601	23680837	Gene ID= novel_gene_chr7_1077 TPM= 3.5 Transcript Type= NA
chr7	23680130	23702650	23680130	23702650	+	ENST00000344962.8@FAM221A	ENST00000344962.8	protein_coding	23680130,23684499,23689269,23691390,23698192,23700786,23702096	23680283,23684672,23689459,23691596,23698299,23700868,23702650	Gene ID= ENSG00000188732.10 TPM= 2.34 Transcript Type= protein_coding
chr7	23680179	23702650	23680179	23702650	+	ENST00000462546.5@FAM221A	ENST00000462546.5	protein_coding	23680179,23684499,23689269,23691390,23692183,23698192,23700786,23702096	23680283,23684672,23689459,23691596,23694913,23698299,23700868,23702650	Gene ID= ENSG00000188732.10 TPM= 1.17 Transcript Type= retained_intron
chr7	23680184	23702650	23680184	23702650	+	ENST00000409994.3@FAM221A	ENST00000409994.3	protein_coding	23680184,23689269,23691390,23700786,23702096	23680283,23689459,23691596,23700868,23702650	Gene ID= ENSG00000188732.10 TPM= 2.34 Transcript Type= protein_coding
chr7	24698353	24758113	24698353	24758113	-	ENST00000342947.7@DFNA5	ENST00000342947.7	protein_coding	24757707,24749564,24744562,24719047,24717254,24710224,24708127,24706184,24702760,24698353	24758113,24749793,24744754,24719218,24717374,24710388,24708254,24706376,24702833,24699259	Gene ID= ENSG00000105928.13 TPM= 5.84 Transcript Type= protein_coding
chr7	24698381	24757475	24698381	24757475	-	ENST00000409970.5@DFNA5	ENST00000409970.5	protein_coding	24757396,24744562,24719047,24717254,24710224,24708127,24706184,24702760,24698381	24757475,24744754,24719218,24717374,24710388,24708254,24706376,24702833,24699259	Gene ID= ENSG00000105928.13 TPM= 1.17 Transcript Type= protein_coding
chr7	24799925	24980222	24799925	24980222	-	transcript1096.chr7.nic@OSBPL3	transcript1096.chr7.nic	protein_coding	24979886,24892377,24871953,24871742,24870732,24866070,24865342,24863496,24861613,24852504,24849069,24842279,24840690,24834486,24830768,24820175,24816610,24815059,24809807,24806776,24804315,24799925	24980222,24892621,24872069,24871795,24870845,24866237,24865465,24863599,24861769,24852634,24849176,24842413,24840783,24834736,24830905,24820238,24816688,24815203,24809951,24806902,24804437,24800279	Gene ID= ENSG00000070882.12 TPM= 3.5 Transcript Type= NA
chr7	26152240	26187125	26152240	26187125	+	ENST00000056233.3@NFE2L3	ENST00000056233.3	protein_coding	26152240,26177943,26183701,26184533	26153068,26178122,26183784,26187125	Gene ID= ENSG00000050344.8 TPM= 2.34 Transcript Type= protein_coding
chr7	26190125	26200746	26190125	26200746	-	ENST00000360787.8@HNRNPA2B1	ENST00000360787.8	protein_coding	26200572,26197831,26197622,26197315,26196807,26196557,26196401,26195847,26193575,26193251,26192495,26190993,26190125	26200746,26197866,26197732,26197461,26197017,26196658,26196481,26195909,26193694,26193373,26192577,26191128,26190460	Gene ID= ENSG00000122566.20 TPM= 4.67 Transcript Type= nonsense_mediated_decay
chr7	26191844	26200746	26191844	26200746	-	ENST00000356674.7@HNRNPA2B1	ENST00000356674.7	protein_coding	26200572,26197622,26197315,26196807,26196557,26196401,26195847,26193575,26193251,26192495,26191844	26200746,26197732,26197461,26197017,26196658,26196481,26195909,26193694,26193373,26192577,26192338	Gene ID= ENSG00000122566.20 TPM= 238.19 Transcript Type= protein_coding
chr7	26201282	26213356	26201282	26213356	+	transcript1171.chr7.nic@CBX3	transcript1171.chr7.nic	protein_coding	26201282,26206368,26208393,26211662,26212082	26203022,26206510,26208555,26211756,26213356	Gene ID= ENSG00000122565.18 TPM= 21.31 Transcript Type= NA
chr7	26201162	26213356	26201162	26213356	+	ENST00000337620.8@CBX3	ENST00000337620.8	protein_coding	26201162,26202971,26206368,26208393,26211662,26212082	26201561,26203022,26206510,26208555,26211756,26213356	Gene ID= ENSG00000122565.18 TPM= 17.61 Transcript Type= protein_coding
chr7	26201693	26213351	26201693	26213351	+	ENST00000396386.6@CBX3	ENST00000396386.6	protein_coding	26201693,26202971,26206368,26208393,26211662,26212082	26201826,26203022,26206510,26208555,26211756,26213351	Gene ID= ENSG00000122565.18 TPM= 154.22 Transcript Type= protein_coding
chr7	26201765	26213356	26201765	26213356	+	ENST00000409747.5@CBX3	ENST00000409747.5	protein_coding	26201765,26202971,26206368,26208466,26211662,26212082	26201826,26203022,26206510,26208555,26211756,26213356	Gene ID= ENSG00000122565.18 TPM= 1.75 Transcript Type= protein_coding
chr7	26291827	26374325	26291827	26374325	+	transcript1180.chr7.nic@SNX10	transcript1180.chr7.nic	protein_coding	26291827,26346420,26357007,26360975,26364535,26365047,26371821,26372491	26292086,26346466,26357127,26361061,26364635,26365145,26372033,26374325	Gene ID= ENSG00000086300.15 TPM= 21.8 Transcript Type= NA
chr7	26360873	26374325	26360873	26374325	+	transcript1192.chr7.nic@SNX10	transcript1192.chr7.nic	protein_coding	26360873,26364535,26365047,26371821,26372491	26361061,26364635,26365145,26372033,26374325	Gene ID= ENSG00000086300.15 TPM= 72.01 Transcript Type= NA
chr7	26291923	26374325	26291923	26374325	+	ENST00000338523.8@SNX10	ENST00000338523.8	protein_coding	26291923,26346420,26360975,26364535,26365047,26371821,26372491	26292086,26346466,26361061,26364635,26365145,26372033,26374325	Gene ID= ENSG00000086300.15 TPM= 108.2 Transcript Type= protein_coding
chr7	26291895	26374317	26291895	26374317	+	ENST00000446848.6@SNX10	ENST00000446848.6	protein_coding	26291895,26346420,26360975,26364535,26365047,26371821,26372491	26292133,26346466,26361061,26364635,26365145,26372033,26374317	Gene ID= ENSG00000086300.15 TPM= 3.12 Transcript Type= protein_coding
chr7	26293054	26374329	26293054	26374329	+	ENST00000396376.5@SNX10	ENST00000396376.5	protein_coding	26293054,26346420,26360975,26364535,26365047,26371821,26372491	26293158,26346466,26361061,26364635,26365145,26372033,26374329	Gene ID= ENSG00000086300.15 TPM= 8.96 Transcript Type= protein_coding
chr7	26551822	26557200	26551822	26557200	+	ENST00000420912.1@AC004947.1	ENST00000420912.1	lincRNA	26551822,26554809	26552210,26557200	Gene ID= ENSG00000233760.1 TPM= 1.17 Transcript Type= lincRNA
chr7	26561076	26567793	26561076	26567793	+	transcript1209.chr7.nnic@NA	transcript1209.chr7.nnic	NA	26561076,26566253,26566570	26561163,26566448,26567793	Gene ID= novel_gene_chr7_1210 TPM= 2.34 Transcript Type= NA
chr7	26667062	26864743	26667062	26864743	-	ENST00000345317.6@SKAP2	ENST00000345317.6	protein_coding	26864363,26854785,26854137,26844030,26739887,26738795,26726882,26725923,26725428,26690285,26684736,26670091,26667062	26864743,26854890,26854162,26844137,26739964,26738878,26727006,26725986,26725565,26690362,26684848,26670192,26669656	Gene ID= ENSG00000005020.12 TPM= 28.02 Transcript Type= protein_coding
chr7	27096124	27099966	27096124	27099966	+	ENST00000429611.7@HOTAIRM1	ENST00000429611.7	antisense_RNA	27096124,27099098,27099779	27096388,27099366,27099966	Gene ID= ENSG00000233429.9 TPM= 1.17 Transcript Type= antisense_RNA
chr7	27096094	27100154	27096094	27100154	+	ENST00000434063.3@HOTAIRM1	ENST00000434063.3	antisense_RNA	27096094,27099779	27096388,27100154	Gene ID= ENSG00000233429.9 TPM= 3.5 Transcript Type= antisense_RNA
chr7	27096153	27100254	27096153	27100254	+	transcript1223.chr7.nnic@NA	transcript1223.chr7.nnic	NA	27096153	27100254	Gene ID= novel_gene_chr7_1224 TPM= 9.34 Transcript Type= NA
chr7	27128505	27130451	27128505	27130451	-	transcript1235.chr7.nnic@NA	transcript1235.chr7.nnic	NA	27128505	27130451	Gene ID= novel_gene_chr7_1236 TPM= 3.5 Transcript Type= NA
chr7	27141052	27143668	27141052	27143668	-	ENST00000222726.3@HOXA5	ENST00000222726.3	protein_coding	27143046,27141052	27143668,27142085	Gene ID= ENSG00000106004.4 TPM= 8.17 Transcript Type= protein_coding
chr7	27153716	27156677	27153716	27156677	-	ENST00000242159.4@HOXA7	ENST00000242159.4	protein_coding	27156167,27153716	27156677,27155222	Gene ID= ENSG00000122592.7 TPM= 7.01 Transcript Type= protein_coding
chr7	27162435	27165530	27162435	27165530	-	ENST00000343483.6@HOXA9	ENST00000343483.6	protein_coding	27164878,27162435	27165530,27163841	Gene ID= ENSG00000078399.17 TPM= 1.17 Transcript Type= protein_coding
chr7	27170591	27174306	27170591	27174306	-	ENST00000283921.4@HOXA10	ENST00000283921.4	protein_coding	27173349,27170591	27174306,27172173	Gene ID= ENSG00000253293.4 TPM= 3.5 Transcript Type= protein_coding
chr7	27525442	27662995	27525442	27662995	-	ENST00000265395.6@HIBADH	ENST00000265395.6	protein_coding	27662698,27649473,27632336,27629371,27542967,27538341,27531192,27525442	27662995,27649633,27632445,27629492,27543100,27538417,27531348,27526372	Gene ID= ENSG00000106049.8 TPM= 73.56 Transcript Type= protein_coding
chr7	27740095	27828881	27740095	27828881	+	ENST00000265393.10@TAX1BP1	ENST00000265393.10	protein_coding	27740095,27748518,27758031,27765834,27769676,27785163,27785399,27787418,27792006,27793066,27794323,27796116,27799965,27816349,27816890,27827738,27828628	27740269,27748686,27758133,27766021,27769834,27785311,27785489,27787603,27792230,27793212,27794446,27796219,27800090,27816394,27817038,27827820,27828881	Gene ID= ENSG00000106052.13 TPM= 144.78 Transcript Type= protein_coding
chr7	27740189	27829263	27740189	27829263	+	ENST00000396319.6@TAX1BP1	ENST00000396319.6	protein_coding	27740189,27748518,27758031,27765834,27769676,27785163,27785399,27787418,27792006,27793066,27794323,27796116,27799965,27816349,27816890,27827738,27828628	27740269,27748686,27758133,27766021,27769834,27785311,27785489,27787603,27792230,27793212,27794446,27796219,27800090,27816520,27817038,27827820,27829263	Gene ID= ENSG00000106052.13 TPM= 15.18 Transcript Type= protein_coding
chr7	27830573	28180743	27830573	28180743	-	ENST00000283928.9@JAZF1	ENST00000283928.9	protein_coding	28180463,27991909,27895220,27840698,27830573	28180743,27991981,27895416,27840867,27832976	Gene ID= ENSG00000153814.11 TPM= 16.35 Transcript Type= protein_coding
chr7	28953358	28958292	28953358	28958292	-	ENST00000539664.2@TRIL	ENST00000539664.2	protein_coding	28953358	28958292	Gene ID= ENSG00000255690.2 TPM= 7.01 Transcript Type= protein_coding
chr7	28995231	29146537	28995231	29146537	-	ENST00000265394.9@CPVL	ENST00000265394.9	protein_coding	29146429,29120893,29112704,29096103,29095084,29092623,29086484,29072301,29071773,29066023,29064061,29030577,28995231	29146537,29121071,29112822,29096217,29095142,29092702,29086550,29072423,29071904,29066121,29064234,29030759,28995882	Gene ID= ENSG00000106066.14 TPM= 4.67 Transcript Type= protein_coding
chr7	28995631	29146497	28995631	29146497	-	ENST00000396276.7@CPVL	ENST00000396276.7	protein_coding	29146341,29120893,29112704,29096103,29095084,29092623,29086484,29072301,29071773,29066023,29064061,29030577,28995631	29146497,29121071,29112822,29096217,29095142,29092702,29086550,29072423,29071904,29066121,29064234,29030759,28995882	Gene ID= ENSG00000106066.14 TPM= 2.34 Transcript Type= protein_coding
chr7	29194412	29514328	29194412	29514328	+	ENST00000222792.10@CHN2	ENST00000222792.10	protein_coding	29194412,29354625,29367932,29393679,29398373,29400543,29480279,29495952,29499867,29504744,29507228,29509301,29512564	29194990,29354663,29367987,29393710,29398486,29400828,29480356,29496036,29500040,29504821,29507365,29509406,29514328	Gene ID= ENSG00000106069.21 TPM= 4.67 Transcript Type= protein_coding
chr7	29194505	29514328	29194505	29514328	+	transcript1314.chr7.nnic@CHN2	transcript1314.chr7.nnic	protein_coding	29194505,29354625,29393679,29398373,29400543,29480279,29495952,29499867,29504744,29507228,29509301,29512564	29194990,29354663,29393710,29398486,29400828,29480356,29496036,29500040,29504821,29507365,29509406,29514328	Gene ID= ENSG00000106069.21 TPM= 2.34 Transcript Type= NA
chr7	29479712	29514328	29479712	29514328	+	ENST00000412711.6@CHN2	ENST00000412711.6	protein_coding	29479712,29495952,29499867,29504744,29507228,29509301,29512564	29480356,29496036,29500040,29504821,29507365,29509406,29514328	Gene ID= ENSG00000106069.21 TPM= 3.5 Transcript Type= protein_coding
chr7	29480053	29514328	29480053	29514328	+	transcript1316.chr7.nic@CHN2	transcript1316.chr7.nic	protein_coding	29480053,29495952,29499867,29504744,29507228,29509301,29512564	29480221,29496036,29500040,29504821,29507365,29509406,29514328	Gene ID= ENSG00000106069.21 TPM= 2.34 Transcript Type= NA
chr7	29480053	29509866	29480053	29509866	+	transcript1318.chr7.nic@CHN2	transcript1318.chr7.nic	protein_coding	29480053,29495952,29499867,29504744,29507228,29509301	29480221,29496036,29500040,29504821,29507365,29509866	Gene ID= ENSG00000106069.21 TPM= 2.34 Transcript Type= NA
chr7	29563811	29567295	29563811	29567295	+	ENST00000319694.2@PRR15	ENST00000319694.2	protein_coding	29563811,29566185	29564377,29567295	Gene ID= ENSG00000176532.3 TPM= 4.67 Transcript Type= protein_coding
chr7	29645921	29648925	29645921	29648925	-	transcript1321.chr7.nnic@NA	transcript1321.chr7.nnic	NA	29645921	29648925	Gene ID= novel_gene_chr7_1322 TPM= 3.5 Transcript Type= NA
chr7	29684642	29687892	29684642	29687892	+	ENST00000602965.1@DPY19L2P3	ENST00000602965.1	transcribed_unprocessed_pseudogene	29684642,29687279	29685022,29687892	Gene ID= ENSG00000227855.3 TPM= 1.17 Transcript Type= processed_transcript
chr7	29920104	29989822	29920104	29989822	-	transcript1325.chr7.nnic@SCRN1	transcript1325.chr7.nnic	protein_coding	29989642,29968909,29966327,29955179,29943977,29940682,29936556,29926452,29920104	29989822,29969068,29966415,29955360,29944179,29940876,29936721,29926632,29924115	Gene ID= ENSG00000136193.16 TPM= 8.56 Transcript Type= NA
chr7	29920109	29989805	29920109	29989805	-	transcript1327.chr7.nnic@SCRN1	transcript1327.chr7.nnic	protein_coding	29989642,29968909,29955179,29943977,29940682,29936556,29926452,29920109	29989805,29969068,29955360,29944179,29940876,29936721,29926632,29924131	Gene ID= ENSG00000136193.16 TPM= 6.22 Transcript Type= NA
chr7	29920103	29989798	29920103	29989798	-	ENST00000242059.9@SCRN1	ENST00000242059.9	protein_coding	29989642,29968909,29955179,29943977,29940682,29936556,29926452,29920103	29989798,29969068,29955360,29944179,29940876,29936721,29926632,29924115	Gene ID= ENSG00000136193.16 TPM= 44.75 Transcript Type= protein_coding
chr7	30028361	30084660	30028361	30084660	+	ENST00000449726.5@PLEKHA8	ENST00000449726.5	protein_coding	30028361,30045085,30046210,30047832,30049224,30050434,30052709,30054709,30055257,30060884,30061897,30062672,30074071,30078590	30028802,30045201,30046365,30047956,30049382,30050474,30052866,30054865,30055342,30060942,30062027,30062742,30074132,30084660	Gene ID= ENSG00000106086.18 TPM= 4.67 Transcript Type= protein_coding
chr7	30028361	30118345	30028361	30118345	+	ENST00000622102.4@PLEKHA8	ENST00000622102.4	protein_coding	30028361,30045085,30046210,30047832,30049224,30050434,30052709,30054709,30055257,30060884,30061897,30062672,30074071,30117970	30028802,30045201,30046365,30047956,30049382,30050474,30052866,30054865,30055342,30060942,30062027,30062742,30074132,30118345	Gene ID= ENSG00000106086.18 TPM= 2.34 Transcript Type= protein_coding
chr7	30028384	30118347	30028384	30118347	+	transcript1345.chr7.nnic@PLEKHA8	transcript1345.chr7.nnic	protein_coding	30028384,30045085,30046210,30047832,30049224,30050434,30052709,30054709,30055257,30060884,30061897,30062672,30117970	30028802,30045201,30046365,30047956,30049382,30050474,30052866,30054865,30055342,30060942,30062027,30062742,30118347	Gene ID= ENSG00000106086.18 TPM= 2.34 Transcript Type= NA
chr7	30028441	30130483	30028441	30130483	+	ENST00000396259.5@PLEKHA8	ENST00000396259.5	protein_coding	30028441,30045085,30046210,30047832,30049224,30050434,30052709,30054709,30055257,30060884,30061897,30062672,30129266	30028802,30045201,30046365,30047956,30049382,30050474,30052866,30054865,30055342,30060942,30062027,30062742,30130483	Gene ID= ENSG00000106086.18 TPM= 1.17 Transcript Type= protein_coding
chr7	30134823	30162762	30134823	30162762	+	transcript1349.chr7.nic@MTURN	transcript1349.chr7.nic	protein_coding	30134823,30146177,30157438,30158986	30135298,30146299,30157595,30162762	Gene ID= ENSG00000180354.15 TPM= 9.92 Transcript Type= NA
chr7	30134810	30162762	30134810	30162762	+	ENST00000324453.12@MTURN	ENST00000324453.12	protein_coding	30134810,30146177,30157438	30135298,30146299,30162762	Gene ID= ENSG00000180354.15 TPM= 11.09 Transcript Type= protein_coding
chr7	30369207	30372924	30369207	30372924	+	transcript1367.chr7.nnic@NA	transcript1367.chr7.nnic	NA	30369207	30372924	Gene ID= novel_gene_chr7_1368 TPM= 2.34 Transcript Type= NA
chr7	30424534	30478744	30424534	30478744	-	transcript1371.chr7.nnic@NOD1	transcript1371.chr7.nnic	protein_coding	30478606,30463609,30459901,30459152,30456721,30455137,30452834,30451216,30448298,30446967,30446141,30437573,30435998,30433096,30429374,30424534	30478744,30463698,30460041,30459240,30457042,30455311,30453040,30452663,30448381,30447050,30446224,30437656,30436081,30433179,30429457,30425710	Gene ID= ENSG00000106100.10 TPM= 2.5 Transcript Type= NA
chr7	30424534	30478714	30424534	30478714	-	transcript1373.chr7.nnic@NOD1	transcript1373.chr7.nnic	protein_coding	30478606,30459901,30459152,30456721,30455137,30452834,30451216,30448298,30446967,30446141,30437573,30435998,30433096,30429374,30424534	30478714,30460041,30459240,30457042,30455311,30453040,30452663,30448381,30447050,30446224,30437656,30436081,30433179,30429457,30425710	Gene ID= ENSG00000106100.10 TPM= 2.5 Transcript Type= NA
chr7	30424534	30478759	30424534	30478759	-	transcript1374.chr7.nnic@NOD1	transcript1374.chr7.nnic	protein_coding	30478606,30459901,30459152,30456721,30455137,30452834,30451216,30448298,30446967,30446141,30437573,30435998,30433096,30429374,30424534	30478759,30460041,30459240,30457042,30455311,30453040,30452697,30448381,30447050,30446224,30437656,30436081,30433179,30429457,30425710	Gene ID= ENSG00000106100.10 TPM= 3.67 Transcript Type= NA
chr7	30424534	30478750	30424534	30478750	-	transcript1375.chr7.nic@NOD1	transcript1375.chr7.nic	protein_coding	30478606,30463609,30459901,30459152,30456721,30455137,30451216,30448298,30446967,30446141,30437573,30435998,30433096,30429374,30424534	30478750,30463698,30460041,30459240,30457042,30455311,30453040,30448381,30447050,30446224,30437656,30436081,30433179,30429457,30425710	Gene ID= ENSG00000106100.10 TPM= 7.46 Transcript Type= NA
chr7	30424534	30478763	30424534	30478763	-	transcript1376.chr7.nnic@NOD1	transcript1376.chr7.nnic	protein_coding	30478606,30463609,30459901,30459152,30456721,30455137,30452834,30451216,30448298,30446967,30446141,30435998,30433096,30429374,30424534	30478763,30463698,30460041,30459240,30457042,30455311,30453040,30452663,30448381,30447050,30446224,30436081,30433179,30429457,30425710	Gene ID= ENSG00000106100.10 TPM= 3.67 Transcript Type= NA
chr7	30424534	30478813	30424534	30478813	-	transcript1382.chr7.nnic@NOD1	transcript1382.chr7.nnic	protein_coding	30478606,30459901,30459152,30456721,30455137,30451216,30448298,30446967,30446141,30435998,30433096,30429374,30424534	30478813,30460041,30459240,30457042,30455311,30453040,30448381,30447050,30446224,30436081,30433179,30429457,30425710	Gene ID= ENSG00000106100.10 TPM= 5.52 Transcript Type= NA
chr7	30436905	30478749	30436905	30478749	-	transcript1391.chr7.nic@NOD1	transcript1391.chr7.nic	protein_coding	30478606,30459901,30459152,30456721,30455137,30451216,30448298,30446967,30446141,30436905	30478749,30460041,30459240,30457042,30455311,30453040,30448381,30447050,30446224,30437656	Gene ID= ENSG00000106100.10 TPM= 3.01 Transcript Type= NA
chr7	30455591	30478754	30455591	30478754	-	transcript1401.chr7.nic@NOD1	transcript1401.chr7.nic	protein_coding	30478606,30459901,30459152,30455591	30478754,30460041,30459240,30457042	Gene ID= ENSG00000106100.10 TPM= 4.67 Transcript Type= NA
chr7	30424527	30478780	30424527	30478780	-	ENST00000222823.8@NOD1	ENST00000222823.8	protein_coding	30478606,30459901,30459152,30456721,30455137,30451216,30448298,30446967,30446141,30437573,30435998,30433096,30429374,30424527	30478780,30460041,30459240,30457042,30455311,30453040,30448381,30447050,30446224,30437656,30436081,30433179,30429457,30425710	Gene ID= ENSG00000106100.10 TPM= 27.71 Transcript Type= protein_coding
chr7	30496621	30504844	30496621	30504844	-	ENST00000275428.8@GGCT	ENST00000275428.8	protein_coding	30504569,30500536,30498803,30496621	30504844,30500681,30498938,30497235	Gene ID= ENSG00000006625.17 TPM= 22.77 Transcript Type= protein_coding
chr7	30496621	30504829	30496621	30504829	-	ENST00000440082.5@GGCT	ENST00000440082.5	protein_coding	30504569,30498803,30496621	30504829,30498938,30497235	Gene ID= ENSG00000006625.17 TPM= 8.76 Transcript Type= nonsense_mediated_decay
chr7	30550445	30571560	30550445	30571560	-	transcript1416.chr7.nnic@AC005154.1	transcript1416.chr7.nnic	processed_transcript	30570280,30568833,30563731,30561466,30550445	30571560,30570213,30563998,30562128,30550781	Gene ID= ENSG00000196295.11 TPM= 11.68 Transcript Type= NA
chr7	30566389	30594777	30566389	30594777	-	transcript1418.chr7.nnic@AC005154.1	transcript1418.chr7.nnic	processed_transcript	30594711,30585330,30579231,30577649,30566389	30594777,30585479,30579314,30578091,30568989	Gene ID= ENSG00000196295.11 TPM= 2.34 Transcript Type= NA
chr7	30566404	30594769	30566404	30594769	-	ENST00000581794.5@AC005154.1	ENST00000581794.5	processed_transcript	30594711,30585330,30566404	30594769,30585479,30568989	Gene ID= ENSG00000196295.11 TPM= 1.17 Transcript Type= retained_intron
chr7	30594681	30634033	30594681	30634033	+	ENST00000389266.7@GARS	ENST00000389266.7	protein_coding	30594681,30598796,30599947,30601059,30603034,30603496,30609585,30612096,30615896,30617114,30621393,30622317,30626234,30628560,30631448,30632247,30633735	30595143,30598897,30600049,30601200,30603122,30603572,30609730,30612245,30616058,30617278,30621500,30622462,30626319,30628669,30631541,30632437,30634033	Gene ID= ENSG00000106105.13 TPM= 150.04 Transcript Type= protein_coding
chr7	30697980	30757602	30697980	30757602	+	transcript1434.chr7.nnic@INMT	transcript1434.chr7.nnic	protein_coding	30697980,30741755,30745283,30753731,30755422	30698230,30741867,30745336,30753938,30757602	Gene ID= ENSG00000241644.2 TPM= 114.19 Transcript Type= NA
chr7	30752136	30757602	30752136	30757602	+	transcript1439.chr7.nnic@INMT	transcript1439.chr7.nnic	protein_coding	30752136,30753731,30755422,30757539	30752304,30753938,30756221,30757602	Gene ID= ENSG00000241644.2 TPM= 5.84 Transcript Type= NA
chr7	30752135	30757604	30752135	30757604	+	transcript1441.chr7.nnic@INMT	transcript1441.chr7.nnic	protein_coding	30752135,30753731,30755422,30756453	30752304,30753938,30756280,30757604	Gene ID= ENSG00000241644.2 TPM= 20.78 Transcript Type= NA
chr7	30752071	30757602	30752071	30757602	+	transcript1444.chr7.nnic@INMT	transcript1444.chr7.nnic	protein_coding	30752071,30753731,30755422,30756535	30752304,30753938,30756362,30757602	Gene ID= ENSG00000241644.2 TPM= 19.62 Transcript Type= NA
chr7	30698091	30700840	30698091	30700840	+	transcript1455.chr7.nnic@NA	transcript1455.chr7.nnic	NA	30698091	30700840	Gene ID= novel_gene_chr7_1456 TPM= 2.34 Transcript Type= NA
chr7	30753886	30892387	30753886	30892387	+	transcript1430.chr7.nic@INMT-MINDY4	transcript1430.chr7.nic	protein_coding	30753886,30766345,30778432,30781977,30785749,30791165,30828679,30836658,30839200,30840760,30850454,30852216,30853394,30859257,30872243,30875495,30882181,30882921,30891957	30753938,30766561,30778551,30782212,30785992,30791574,30828737,30836764,30839316,30840848,30850555,30852279,30853459,30859324,30872306,30875656,30882361,30882993,30892387	Gene ID= ENSG00000254959.6 TPM= 2.92 Transcript Type= NA
chr7	30756404	30761326	30756404	30761326	-	transcript1459.chr7.nnic@NA	transcript1459.chr7.nnic	NA	30756404	30761326	Gene ID= novel_gene_chr7_1460 TPM= 95.74 Transcript Type= NA
chr7	30771417	30892387	30771417	30892387	+	ENST00000265299.6@MINDY4	ENST00000265299.6	protein_coding	30771417,30778432,30781977,30785749,30791165,30828679,30836658,30839200,30840760,30850454,30852216,30853394,30859257,30872243,30875495,30882181,30882921,30891957	30771556,30778551,30782212,30785992,30791574,30828737,30836764,30839316,30840848,30850555,30852279,30853459,30859324,30872306,30875656,30882361,30882993,30892387	Gene ID= ENSG00000106125.14 TPM= 11.09 Transcript Type= protein_coding
chr7	30841174	30845534	30841174	30845534	+	transcript1457.chr7.nnic@NA	transcript1457.chr7.nnic	NA	30841174	30845534	Gene ID= novel_gene_chr7_1458 TPM= 3.5 Transcript Type= NA
chr7	30911694	30925516	30911694	30925516	+	ENST00000311813.9@AQP1	ENST00000311813.9	protein_coding	30911694,30922066,30922564,30923450	30912293,30922230,30922644,30925516	Gene ID= ENSG00000240583.11 TPM= 2165.3 Transcript Type= protein_coding
chr7	30929112	30932147	30929112	30932147	-	transcript1480.chr7.nnic@NA	transcript1480.chr7.nnic	NA	30929112	30932147	Gene ID= novel_gene_chr7_1481 TPM= 16.35 Transcript Type= NA
chr7	31751179	32070427	31751179	32070427	-	transcript1485.chr7.nic@PDE1C	transcript1485.chr7.nic	protein_coding	32070293,32051554,31880747,31878996,31877970,31873292,31864942,31850641,31847968,31837870,31837180,31828292,31824867,31820531,31815924,31809031,31775664,31751179	32070427,32051580,31880860,31879178,31878036,31873408,31865082,31850741,31848096,31837971,31837300,31828373,31824987,31823248,31816154,31809108,31775732,31753553	Gene ID= ENSG00000154678.16 TPM= 2.34 Transcript Type= NA
chr7	31753018	32070849	31753018	32070849	-	ENST00000396191.5@PDE1C	ENST00000396191.5	protein_coding	32070293,32051554,31880747,31878996,31877970,31873292,31864942,31850641,31847968,31837870,31837180,31828292,31824867,31823073,31815924,31809031,31775664,31753018	32070849,32051580,31880860,31879178,31878036,31873408,31865082,31850741,31848096,31837971,31837300,31828373,31824987,31823248,31816154,31809108,31775732,31753553	Gene ID= ENSG00000154678.16 TPM= 3.5 Transcript Type= protein_coding
chr7	32486805	32495283	32486805	32495283	-	ENST00000409909.7@LSM5	ENST00000409909.7	protein_coding	32495230,32489249,32488625,32487685,32486805	32495283,32489344,32488652,32487757,32487293	Gene ID= ENSG00000106355.9 TPM= 2.34 Transcript Type= protein_coding
chr7	32485332	32490418	32485332	32490418	-	ENST00000450169.6@LSM5	ENST00000450169.6	protein_coding	32490320,32489249,32488625,32487685,32485332	32490418,32489344,32488652,32487757,32487293	Gene ID= ENSG00000106355.9 TPM= 4.67 Transcript Type= protein_coding
chr7	32499663	32502407	32499663	32502407	+	transcript1504.chr7.nnic@NA	transcript1504.chr7.nnic	NA	32499663	32502407	Gene ID= novel_gene_chr7_1505 TPM= 2.34 Transcript Type= NA
chr7	32514750	32519439	32514750	32519439	+	transcript1506.chr7.nnic@NA	transcript1506.chr7.nnic	NA	32514750	32519439	Gene ID= novel_gene_chr7_1507 TPM= 2.34 Transcript Type= NA
chr7	32728046	32754804	32728046	32754804	+	transcript1499.chr7.nnic@ZNRF2P1	transcript1499.chr7.nnic	processed_pseudogene	32728046,32751394,32753206	32729009,32751473,32754804	Gene ID= ENSG00000237004.3 TPM= 2.34 Transcript Type= NA
chr7	32753881	32755875	32753881	32755875	+	transcript1508.chr7.nnic@NA	transcript1508.chr7.nnic	NA	32753881	32755875	Gene ID= novel_gene_chr7_1509 TPM= 2.34 Transcript Type= NA
chr7	32861366	32867985	32861366	32867985	-	transcript1526.chr7.nnic@NA	transcript1526.chr7.nnic	NA	32861366	32867985	Gene ID= novel_gene_chr7_1527 TPM= 4.67 Transcript Type= NA
chr7	32868172	32891627	32868172	32891627	-	transcript1511.chr7.nnic@KBTBD2	transcript1511.chr7.nnic	protein_coding	32891536,32879435,32874992,32874707,32868172	32891627,32879942,32875157,32874823,32870880	Gene ID= ENSG00000170852.10 TPM= 3.5 Transcript Type= NA
chr7	32868172	32891888	32868172	32891888	-	transcript1521.chr7.nic@KBTBD2	transcript1521.chr7.nic	protein_coding	32891536,32879701,32874992,32868172	32891888,32879942,32875157,32870880	Gene ID= ENSG00000170852.10 TPM= 8.17 Transcript Type= NA
chr7	32868172	32891897	32868172	32891897	-	ENST00000304056.8@KBTBD2	ENST00000304056.8	protein_coding	32891536,32879435,32874992,32868172	32891897,32879942,32875157,32870880	Gene ID= ENSG00000170852.10 TPM= 74.73 Transcript Type= protein_coding
chr7	32888216	32892064	32888216	32892064	-	transcript1528.chr7.nnic@NA	transcript1528.chr7.nnic	NA	32888216	32892064	Gene ID= novel_gene_chr7_1529 TPM= 3.5 Transcript Type= NA
chr7	32929224	32943202	32929224	32943202	-	transcript1541.chr7.nnic@RP9P	transcript1541.chr7.nnic	transcribed_unprocessed_pseudogene	32942320,32933814,32929224	32943202,32933896,32930108	Gene ID= ENSG00000205763.13 TPM= 2.34 Transcript Type= NA
chr7	32916815	32943176	32916815	32943176	-	ENST00000381639.3@RP9P	ENST00000381639.3	transcribed_unprocessed_pseudogene	32942870,32933814,32930078,32921339,32918311,32916815	32943176,32933896,32930108,32921430,32918372,32917542	Gene ID= ENSG00000205763.13 TPM= 3.5 Transcript Type= processed_transcript
chr7	32957404	33006930	32957404	33006930	+	ENST00000538336.5@FKBP9	ENST00000538336.5	protein_coding	32957404,32963544,32974617,32975182,32976354,32980364,32988507,32996163,33000115,33002676,33005175	32957794,32963702,32974762,32975371,32976499,32980553,32988652,32996349,33000260,33002839,33006930	Gene ID= ENSG00000122642.10 TPM= 11.79 Transcript Type= protein_coding
chr7	32957405	33006931	32957405	33006931	+	ENST00000242209.8@FKBP9	ENST00000242209.8	protein_coding	32957405,32974617,32975182,32976354,32980364,32988507,32996163,33000115,33002676,33005175	32957794,32974762,32975371,32976499,32980553,32988652,32996349,33000260,33002839,33006931	Gene ID= ENSG00000122642.10 TPM= 348.64 Transcript Type= protein_coding
chr7	33014114	33041165	33014114	33041165	-	ENST00000381626.6@NT5C3A	ENST00000381626.6	protein_coding	33040872,33035934,33029629,33026817,33024039,33022053,33021272,33019635,33017439,33015670,33014114	33041165,33035988,33029714,33026915,33024108,33022099,33021357,33019724,33017601,33015870,33014831	Gene ID= ENSG00000122643.18 TPM= 3.5 Transcript Type= protein_coding
chr7	33014130	33062796	33014130	33062796	-	ENST00000456458.5@NT5C3A	ENST00000456458.5	protein_coding	33062568,33035934,33026817,33024039,33022053,33021272,33019635,33017439,33015670,33014130	33062796,33035988,33026915,33024108,33022099,33021357,33019724,33017601,33015870,33014831	Gene ID= ENSG00000122643.18 TPM= 16.35 Transcript Type= nonsense_mediated_decay
chr7	33094797	33109390	33094797	33109390	-	ENST00000297157.7@RP9	ENST00000297157.7	protein_coding	33109221,33100531,33099307,33097271,33096493,33094797	33109390,33100561,33099436,33097362,33096554,33095432	Gene ID= ENSG00000164610.8 TPM= 16.35 Transcript Type= protein_coding
chr7	33129297	33605632	33129297	33605632	+	transcript1576.chr7.nic@BBS9	transcript1576.chr7.nic	protein_coding	33129297,33146242,33152701,33155638,33177478,33257236,33264290,33273012,33273827,33336441,33340897,33344581,33349068,33351219,33352859,33357855,33367767,33383666,33387992,33505463,33533954,33604865,33605195	33129552,33146364,33152851,33155702,33177591,33257410,33264374,33273195,33273956,33336622,33340973,33344634,33349170,33351323,33352873,33357995,33367862,33383838,33388144,33505645,33534176,33604975,33605632	Gene ID= ENSG00000122507.20 TPM= 4.67 Transcript Type= NA
chr7	33129532	33606068	33129532	33606068	+	ENST00000242067.10@BBS9	ENST00000242067.10	protein_coding	33129532,33146242,33152701,33155638,33177478,33257236,33264290,33273012,33273827,33336441,33340897,33344581,33349068,33351219,33352859,33357855,33367767,33383666,33387992,33505463,33533954,33604865,33605195	33130041,33146364,33152851,33155702,33177591,33257410,33264374,33273195,33273956,33336622,33340973,33344634,33349170,33351323,33352873,33357995,33367862,33383838,33388144,33505645,33534176,33604975,33606068	Gene ID= ENSG00000122507.20 TPM= 19.85 Transcript Type= protein_coding
chr7	33129540	33606068	33129540	33606068	+	ENST00000396127.6@BBS9	ENST00000396127.6	protein_coding	33129540,33146242,33152701,33155638,33177478,33257236,33264290,33273012,33273827,33336441,33340897,33344581,33349068,33352859,33357855,33367767,33383666,33387992,33505463,33533954,33604865,33605195	33130041,33146364,33152851,33155702,33177591,33257410,33264374,33273195,33273956,33336622,33340973,33344634,33349170,33352873,33357995,33367862,33383838,33388144,33505645,33534176,33604975,33606068	Gene ID= ENSG00000122507.20 TPM= 1.17 Transcript Type= protein_coding
chr7	33905084	34154814	33905084	34154814	+	transcript1590.chr7.nic@BMPER	transcript1590.chr7.nic	protein_coding	33905084,33906818,33937289,33966479,33970329,33974702,34046306,34051861,34055163,34058059,34062002,34078857,34085756,34143230,34153092	33905746,33906903,33937388,33966561,33970419,33974784,34046405,34051970,34055303,34058163,34062047,34079186,34086092,34143360,34154814	Gene ID= ENSG00000164619.8 TPM= 7.01 Transcript Type= NA
chr7	34928876	35037525	34928876	35037525	-	ENST00000638088.1@DPY19L1	ENST00000638088.1	protein_coding	35037097,35018572,35017882,35013568,35011330,35010468,34989884,34973514,34969433,34966894,34957984,34955308,34954698,34949797,34947630,34945667,34942615,34941765,34940153,34939276,34937994,34928876	35037525,35018596,35017969,35013705,35011450,35010561,34989941,34973605,34969532,34966971,34958070,34955367,34954778,34949898,34947701,34945716,34942639,34941884,34940327,34939375,34938119,34931729	Gene ID= ENSG00000173852.14 TPM= 59.55 Transcript Type= protein_coding
chr7	35632659	35695140	35632659	35695140	-	transcript1610.chr7.nnic@HERPUD2	transcript1610.chr7.nnic	protein_coding	35694184,35673201,35670215,35667434,35638350,35634312,35632659	35695140,35673278,35670328,35667588,35638472,35634429,35633851	Gene ID= ENSG00000122557.9 TPM= 2.34 Transcript Type= NA
chr7	35632659	35695188	35632659	35695188	-	transcript1611.chr7.nic@HERPUD2	transcript1611.chr7.nic	protein_coding	35694184,35667434,35638350,35635135,35634312,35632659	35695188,35667588,35638472,35635458,35634429,35633851	Gene ID= ENSG00000122557.9 TPM= 4.67 Transcript Type= NA
chr7	35632659	35695135	35632659	35695135	-	ENST00000396081.5@HERPUD2	ENST00000396081.5	protein_coding	35694184,35673201,35670215,35667434,35638350,35635135,35634312,35632659	35695135,35673278,35670328,35667588,35638472,35635458,35634429,35633851	Gene ID= ENSG00000122557.9 TPM= 50.21 Transcript Type= protein_coding
chr7	35695214	35699413	35695214	35699413	+	ENST00000605778.1@AC018647.2	ENST00000605778.1	antisense_RNA	35695214	35699413	Gene ID= ENSG00000271122.1 TPM= 4.67 Transcript Type= antisense_RNA
chr7	35716486	35719712	35716486	35719712	+	ENST00000458087.3@AC018647.1	ENST00000458087.3	lincRNA	35716486,35719070	35717128,35719712	Gene ID= ENSG00000227544.8 TPM= 1.17 Transcript Type= lincRNA
chr7	35801218	35905305	35801218	35905305	+	transcript1623.chr7.nic@SEPT7	transcript1623.chr7.nic	protein_coding	35801218,35832798,35838564,35863552,35872666,35873641,35879823,35882484,35883891,35885828,35890668,35898248,35903076,35904254	35801270,35832900,35838657,35863658,35872766,35873775,35879940,35882576,35883987,35885879,35890793,35898383,35903215,35905305	Gene ID= ENSG00000122545.18 TPM= 12.38 Transcript Type= NA
chr7	35800932	35907105	35800932	35907105	+	ENST00000399034.7@SEPT7	ENST00000399034.7	protein_coding	35800932,35832798,35863552,35872666,35873641,35879823,35882484,35883891,35885828,35890668,35898248,35903076,35904254	35801270,35832900,35863658,35872766,35873775,35879940,35882576,35883987,35885879,35890793,35898383,35903215,35907105	Gene ID= ENSG00000122545.18 TPM= 193.82 Transcript Type= protein_coding
chr7	36153149	36301543	36153149	36301543	+	ENST00000242108.8@EEPD1	ENST00000242108.8	protein_coding	36153149,36154133,36238985,36281115,36284686,36287639,36296993,36299007	36153674,36155202,36239036,36281225,36284820,36287777,36297187,36301543	Gene ID= ENSG00000122547.10 TPM= 19.85 Transcript Type= protein_coding
chr7	36281056	36299725	36281056	36299725	+	transcript1635.chr7.nic@EEPD1	transcript1635.chr7.nic	protein_coding	36281056,36284686,36287639,36296993,36299007	36281225,36284820,36287777,36297187,36299725	Gene ID= ENSG00000122547.10 TPM= 5.84 Transcript Type= NA
chr7	36183877	36186125	36183877	36186125	-	transcript1637.chr7.nnic@NA	transcript1637.chr7.nnic	NA	36183877	36186125	Gene ID= novel_gene_chr7_1638 TPM= 2.34 Transcript Type= NA
chr7	36324223	36367233	36324223	36367233	-	transcript1642.chr7.nic@KIAA0895	transcript1642.chr7.nic	protein_coding	36366916,36336154,36335046,36333856,36330982,36324223	36367233,36336297,36335178,36334161,36331079,36326918	Gene ID= ENSG00000164542.12 TPM= 3.5 Transcript Type= NA
chr7	36324223	36367141	36324223	36367141	-	transcript1643.chr7.nic@KIAA0895	transcript1643.chr7.nic	protein_coding	36367111,36356902,36335046,36333856,36330982,36324223	36367141,36357590,36335178,36334161,36331079,36326918	Gene ID= ENSG00000164542.12 TPM= 2.34 Transcript Type= NA
chr7	36389806	36453791	36389806	36453791	+	ENST00000265748.6@ANLN	ENST00000265748.6	protein_coding	36389806,36396266,36399079,36406181,36407734,36410514,36411059,36415758,36417080,36419244,36420169,36420597,36421857,36422633,36423817,36424545,36424686,36425702,36426015,36426916,36439204,36443755,36449665,36452477	36390044,36396419,36399393,36406566,36407956,36410704,36411166,36415884,36417190,36419479,36420314,36420744,36421992,36422809,36423943,36424593,36424742,36425740,36426036,36427028,36439290,36443862,36449837,36453791	Gene ID= ENSG00000011426.10 TPM= 1.17 Transcript Type= protein_coding
chr7	36512999	36724548	36512999	36724548	-	ENST00000617537.4@AOAH	ENST00000617537.4	protein_coding	36724022,36686699,36673943,36659166,36637851,36632036,36623190,36621710,36620781,36618297,36616380,36594339,36576574,36549439,36548612,36540319,36532286,36532147,36530418,36522039,36512999	36724548,36686794,36674009,36659265,36637910,36632106,36623250,36621780,36620829,36618345,36616474,36594430,36576656,36549475,36548686,36540491,36532344,36532206,36530514,36522115,36513380	Gene ID= ENSG00000136250.11 TPM= 8.17 Transcript Type= protein_coding
chr7	36512949	36724549	36512949	36724549	-	ENST00000612871.4@AOAH	ENST00000612871.4	protein_coding	36724022,36673943,36659166,36637851,36632036,36623190,36621710,36620781,36618297,36616380,36594339,36576574,36549439,36548612,36540319,36532286,36532147,36530418,36522039,36512949	36724549,36674009,36659265,36637910,36632106,36623250,36621780,36620829,36618345,36616474,36594430,36576656,36549475,36548686,36540491,36532344,36532206,36530514,36522115,36513380	Gene ID= ENSG00000136250.11 TPM= 2.34 Transcript Type= protein_coding
chr7	36854361	37449249	36854361	37449249	-	ENST00000310758.8@ELMO1	ENST00000310758.8	protein_coding	37448675,37342613,37315920,37314850,37271832,37259181,37244356,37233095,37224879,37222615,37216645,37213335,37211386,37133130,37096619,37013299,36894854,36887560,36878010,36870393,36861659,36854361	37449249,37342763,37315960,37314922,37271882,37259350,37244391,37233194,37225030,37222693,37216695,37213457,37211517,37133234,37096727,37013435,36895017,36887672,36878117,36870475,36861736,36855751	Gene ID= ENSG00000155849.15 TPM= 61.88 Transcript Type= protein_coding
chr7	37220239	37448885	37220239	37448885	-	transcript1667.chr7.nic@ELMO1	transcript1667.chr7.nic	protein_coding	37448675,37342613,37315920,37314850,37271832,37259181,37244356,37233095,37224879,37220239	37448885,37342763,37315960,37314922,37271882,37259350,37244391,37233194,37225030,37222693	Gene ID= ENSG00000155849.15 TPM= 2.34 Transcript Type= NA
chr7	37920561	37951941	37920561	37951941	+	ENST00000199448.8@EPDR1	ENST00000199448.8	protein_coding	37920561,37948840,37950200	37921208,37949048,37951941	Gene ID= ENSG00000086289.11 TPM= 78.23 Transcript Type= protein_coding
chr7	37920599	37951936	37920599	37951936	+	transcript1676.chr7.nnic@EPDR1	transcript1676.chr7.nnic	protein_coding	37920599,37948840,37950200	37921208,37950102,37951936	Gene ID= ENSG00000086289.11 TPM= 4.67 Transcript Type= NA
chr7	37920599	37951936	37920599	37951936	+	transcript1678.chr7.nic@EPDR1	transcript1678.chr7.nic	protein_coding	37920599,37948840	37921208,37951936	Gene ID= ENSG00000086289.11 TPM= 5.84 Transcript Type= NA
chr7	37937987	37943561	37937987	37943561	-	transcript1681.chr7.nnic@NA	transcript1681.chr7.nnic	NA	37937987	37943561	Gene ID= novel_gene_chr7_1682 TPM= 4.67 Transcript Type= NA
chr7	38178222	38230671	38178222	38230671	+	ENST00000009041.11@STARD3NL	ENST00000009041.11	protein_coding	38178222,38207447,38214357,38215028,38217025,38217188,38219565,38228799,38229923	38178420,38207729,38214434,38215105,38217078,38217305,38219660,38228871,38230671	Gene ID= ENSG00000010270.13 TPM= 70.06 Transcript Type= protein_coding
chr7	38178263	38230379	38178263	38230379	+	ENST00000434197.5@STARD3NL	ENST00000434197.5	protein_coding	38178263,38207447,38214357,38215028,38217188,38219565,38228799,38229923	38178420,38207729,38214434,38215105,38217305,38219660,38228871,38230379	Gene ID= ENSG00000010270.13 TPM= 1.17 Transcript Type= protein_coding
chr7	38178351	38230381	38178351	38230381	+	ENST00000396013.5@STARD3NL	ENST00000396013.5	protein_coding	38178351,38179090,38207447,38214357,38215028,38217025,38217188,38219565,38228799,38229923	38178420,38179145,38207729,38214434,38215105,38217078,38217305,38219660,38228871,38230381	Gene ID= ENSG00000010270.13 TPM= 5.84 Transcript Type= protein_coding
chr7	38239580	38256933	38239580	38256933	-	transcript1702.chr7.nnic@TRGC2	transcript1702.chr7.nnic	TR_C_gene	38256337,38249243,38245183,38242428,38239580	38256933,38249572,38245230,38242475,38240166	Gene ID= ENSG00000227191.8 TPM= 5.84 Transcript Type= NA
chr7	38341577	38342702	38341577	38342702	+	ENST00000629576.1@TRG-AS1	ENST00000629576.1	antisense_RNA	38341577,38342256	38341799,38342702	Gene ID= ENSG00000281103.1 TPM= 1.17 Transcript Type= antisense_RNA
chr7	38383704	38631420	38383704	38631420	-	ENST00000325590.9@AMPH	ENST00000325590.9	protein_coding	38631283,38534931,38503650,38494433,38491050,38476862,38475331,38466173,38465467,38462975,38461283,38436272,38432189,38429842,38426954,38422421,38394005,38391748,38389804,38383704	38631420,38535011,38503704,38494527,38491145,38476969,38475416,38466248,38465549,38463113,38461411,38436388,38432212,38429865,38426986,38422477,38394214,38392017,38389905,38384925	Gene ID= ENSG00000078053.16 TPM= 2.34 Transcript Type= protein_coding
chr7	38722963	38909229	38722963	38909229	-	ENST00000310301.8@VPS41	ENST00000310301.8	protein_coding	38909154,38898091,38869146,38862545,38830254,38821203,38817817,38796745,38795465,38789801,38776679,38774115,38772522,38771198,38767537,38765580,38763455,38758354,38756838,38754895,38754702,38752176,38745559,38743402,38741985,38728692,38728542,38726909,38722963	38909229,38898129,38869253,38862622,38830328,38821265,38817882,38796864,38795611,38789867,38776776,38774244,38772637,38771254,38767598,38765661,38763547,38758481,38756982,38754936,38754752,38752313,38745613,38743542,38742121,38728791,38728586,38726988,38726326	Gene ID= ENSG00000006715.15 TPM= 14.01 Transcript Type= protein_coding
chr7	38725555	38909191	38725555	38909191	-	transcript1729.chr7.nic@VPS41	transcript1729.chr7.nic	protein_coding	38909154,38869146,38862545,38830254,38821203,38817817,38796745,38795465,38789801,38776679,38774115,38772522,38771198,38767537,38765580,38763455,38758354,38756838,38754895,38754702,38752176,38745559,38743402,38741985,38728692,38728542,38726909,38725555	38909191,38869253,38862622,38830328,38821265,38817882,38796864,38795611,38789867,38776776,38774244,38772637,38771254,38767598,38765661,38763547,38758481,38756982,38754936,38754752,38752313,38745613,38743542,38742121,38728791,38728586,38726988,38726326	Gene ID= ENSG00000006715.15 TPM= 3.5 Transcript Type= NA
chr7	38725555	38909174	38725555	38909174	-	ENST00000395969.6@VPS41	ENST00000395969.6	protein_coding	38909154,38898091,38869146,38862545,38821203,38817817,38796745,38795465,38789801,38776679,38774115,38772522,38771198,38767537,38765580,38763455,38758354,38756838,38754895,38754702,38752176,38745559,38743402,38741985,38728692,38728542,38726909,38725555	38909174,38898129,38869253,38862622,38821265,38817882,38796864,38795611,38789867,38776776,38774244,38772637,38771254,38767598,38765661,38763547,38758481,38756982,38754936,38754752,38752313,38745613,38743542,38742121,38728791,38728586,38726988,38726326	Gene ID= ENSG00000006715.15 TPM= 3.5 Transcript Type= protein_coding
chr7	39566376	39572881	39566376	39572881	+	ENST00000223273.6@YAE1D1	ENST00000223273.6	protein_coding	39566376,39570506,39572277	39566547,39570627,39572881	Gene ID= ENSG00000241127.7 TPM= 5.84 Transcript Type= protein_coding
chr7	39623577	39708115	39623577	39708115	+	transcript1742.chr7.nnic@RALA	transcript1742.chr7.nnic	protein_coding	39623577,39686631,39690382,39696685,39706123,39706581	39623825,39686781,39690590,39696859,39706537,39708115	Gene ID= ENSG00000006451.7 TPM= 3.5 Transcript Type= NA
chr7	39623424	39708124	39623424	39708124	+	transcript1743.chr7.nnic@RALA	transcript1743.chr7.nnic	protein_coding	39623424,39624331,39686631,39690382,39696685,39706123	39623825,39624427,39686781,39690590,39696859,39708124	Gene ID= ENSG00000006451.7 TPM= 3.5 Transcript Type= NA
chr7	39623571	39708124	39623571	39708124	+	transcript1745.chr7.nnic@RALA	transcript1745.chr7.nnic	protein_coding	39623571,39665226,39686631,39690382,39696685,39706123	39623825,39665290,39686781,39690590,39696859,39708124	Gene ID= ENSG00000006451.7 TPM= 3.5 Transcript Type= NA
chr7	39623713	39708124	39623713	39708124	+	transcript1749.chr7.nic@RALA	transcript1749.chr7.nic	protein_coding	39623713,39686631,39690382,39696685,39706123	39624427,39686781,39690590,39696859,39708124	Gene ID= ENSG00000006451.7 TPM= 5.84 Transcript Type= NA
chr7	39623483	39708124	39623483	39708124	+	ENST00000005257.6@RALA	ENST00000005257.6	protein_coding	39623483,39686631,39690382,39696685,39706123	39623825,39686781,39690590,39696859,39708124	Gene ID= ENSG00000006451.7 TPM= 130.77 Transcript Type= protein_coding
chr7	39624312	39628595	39624312	39628595	-	transcript1751.chr7.nnic@NA	transcript1751.chr7.nnic	NA	39624312	39628595	Gene ID= novel_gene_chr7_1752 TPM= 5.84 Transcript Type= NA
chr7	39947520	39949955	39947520	39949955	-	transcript1771.chr7.nnic@NA	transcript1771.chr7.nnic	NA	39947520	39949955	Gene ID= novel_gene_chr7_1772 TPM= 2.34 Transcript Type= NA
chr7	39950019	40049206	39950019	40049206	+	transcript1760.chr7.nic@CDK13	transcript1760.chr7.nic	protein_coding	39950019,39987599,39997494,39999361,40001861,40045836,40047821	39951852,39988258,39997664,39999500,40002031,40046025,40049206	Gene ID= ENSG00000065883.14 TPM= 8.17 Transcript Type= NA
chr7	39950019	39998472	39950019	39998472	+	transcript1764.chr7.nic@CDK13	transcript1764.chr7.nic	protein_coding	39950019,39987599,39997494	39951852,39988258,39998472	Gene ID= ENSG00000065883.14 TPM= 9.34 Transcript Type= NA
chr7	40049409	40051052	40049409	40051052	-	transcript1769.chr7.nnic@NA	transcript1769.chr7.nnic	NA	40049409	40051052	Gene ID= novel_gene_chr7_1770 TPM= 3.5 Transcript Type= NA
chr7	40132742	40134640	40132742	40134640	-	transcript1776.chr7.nnic@NA	transcript1776.chr7.nnic	NA	40132742	40134640	Gene ID= novel_gene_chr7_1777 TPM= 7.01 Transcript Type= NA
chr7	40134977	40860763	40134977	40860763	+	ENST00000335693.8@SUGCT	ENST00000335693.8	protein_coding	40134977,40180947,40181955,40188495,40189544,40194940,40237635,40274513,40316760,40449287,40459101,40496284,40749434,40860316	40135120,40180998,40182028,40188580,40189594,40195060,40237726,40274656,40316855,40449358,40459198,40496386,40749497,40860763	Gene ID= ENSG00000175600.15 TPM= 1.17 Transcript Type= protein_coding
chr7	41689516	41692564	41689516	41692564	-	ENST00000464515.1@INHBA	ENST00000464515.1	protein_coding	41691189,41689516	41692564,41690542	Gene ID= ENSG00000122641.10 TPM= 1.17 Transcript Type= processed_transcript
chr7	41700462	41703120	41700462	41703120	-	transcript1784.chr7.nic@INHBA	transcript1784.chr7.nic	protein_coding	41703005,41700462	41703120,41700517	Gene ID= ENSG00000122641.10 TPM= 11.68 Transcript Type= NA
chr7	41685114	41703108	41685114	41703108	-	ENST00000242208.4@INHBA	ENST00000242208.4	protein_coding	41703005,41699987,41685114	41703108,41700517,41690542	Gene ID= ENSG00000122641.10 TPM= 8.17 Transcript Type= protein_coding
chr7	41689534	41700609	41689534	41700609	-	ENST00000442711.1@INHBA	ENST00000442711.1	protein_coding	41699987,41689534	41700609,41690542	Gene ID= ENSG00000122641.10 TPM= 1.17 Transcript Type= protein_coding
chr7	42908726	42912169	42908726	42912169	-	ENST00000350427.4@C7orf25	ENST00000350427.4	protein_coding	42911915,42908726	42912169,42910921	Gene ID= ENSG00000136197.12 TPM= 2.34 Transcript Type= protein_coding
chr7	42916857	42932223	42916857	42932223	-	ENST00000223321.8@PSMA2	ENST00000223321.8	protein_coding	42932118,42927383,42926536,42924675,42923325,42921858,42917778,42916857	42932223,42927459,42926668,42924797,42923406,42921931,42917835,42917690	Gene ID= ENSG00000106588.10 TPM= 38.53 Transcript Type= protein_coding
chr7	42932200	42937857	42932200	42937857	+	ENST00000223324.2@MRPL32	ENST00000223324.2	protein_coding	42932200,42934955,42937322	42932516,42935136,42937857	Gene ID= ENSG00000106591.3 TPM= 35.03 Transcript Type= protein_coding
chr7	42932361	42937857	42932361	42937857	+	transcript1800.chr7.nic@MRPL32	transcript1800.chr7.nic	protein_coding	42932361,42934955	42932516,42937857	Gene ID= ENSG00000106591.3 TPM= 7.01 Transcript Type= NA
chr7	43583065	43626786	43583065	43626786	+	ENST00000319357.5@STK17A	ENST00000319357.5	protein_coding	43583065,43595901,43608256,43619597,43623572,43623709,43624518	43583449,43596113,43608400,43619723,43623620,43623888,43626786	Gene ID= ENSG00000164543.5 TPM= 65.39 Transcript Type= protein_coding
chr7	43583594	43625184	43583594	43625184	+	transcript1812.chr7.nnic@STK17A	transcript1812.chr7.nnic	protein_coding	43583594,43595901,43608256,43619597,43623572,43623709,43624518	43583809,43596113,43608400,43619723,43623620,43623888,43625184	Gene ID= ENSG00000164543.5 TPM= 3.5 Transcript Type= NA
chr7	43583101	43610371	43583101	43610371	+	transcript1820.chr7.nic@STK17A	transcript1820.chr7.nic	protein_coding	43583101,43595901,43608256	43583449,43596113,43610371	Gene ID= ENSG00000164543.5 TPM= 5.84 Transcript Type= NA
chr7	43639257	43729530	43639257	43729530	-	transcript1815.chr7.nic@COA1	transcript1815.chr7.nic	protein_coding	43729429,43665658,43648600,43647535,43645251,43640573,43639257	43729530,43665722,43648652,43647634,43645399,43640649,43639681	Gene ID= ENSG00000106603.18 TPM= 3.5 Transcript Type= NA
chr7	43639247	43729541	43639247	43729541	-	ENST00000223336.10@COA1	ENST00000223336.10	protein_coding	43729429,43648600,43647535,43645251,43640573,43639247	43729541,43648652,43647634,43645399,43640649,43639681	Gene ID= ENSG00000106603.18 TPM= 8.17 Transcript Type= protein_coding
chr7	43727979	43729505	43727979	43729505	-	transcript1821.chr7.nnic@NA	transcript1821.chr7.nnic	NA	43727979	43729505	Gene ID= novel_gene_chr7_1822 TPM= 3.5 Transcript Type= NA
chr7	43758680	43807339	43758680	43807339	+	ENST00000265523.8@BLVRA	ENST00000265523.8	protein_coding	43758680,43771138,43787904,43791249,43792715,43800465,43803676,43806977	43758734,43771170,43788025,43791368,43792812,43800572,43803847,43807339	Gene ID= ENSG00000106605.10 TPM= 131.94 Transcript Type= protein_coding
chr7	43758687	43807342	43758687	43807342	+	ENST00000402924.5@BLVRA	ENST00000402924.5	protein_coding	43758687,43760017,43771138,43787904,43791249,43792715,43800465,43803676,43806977	43758734,43760110,43771170,43788025,43791368,43792812,43800572,43803847,43807342	Gene ID= ENSG00000106605.10 TPM= 24.52 Transcript Type= protein_coding
chr7	43866558	43869557	43866558	43869557	-	ENST00000317534.5@MRPS24	ENST00000317534.5	protein_coding	43869457,43869308,43868963,43866558	43869557,43869376,43869074,43866982	Gene ID= ENSG00000062582.13 TPM= 43.78 Transcript Type= protein_coding
chr7	43866562	43869517	43866562	43869517	-	ENST00000418740.5@MRPS24	ENST00000418740.5	protein_coding	43869308,43868963,43866562	43869517,43869074,43866982	Gene ID= ENSG00000062582.13 TPM= 15.76 Transcript Type= protein_coding
chr7	43875894	43906614	43875894	43906614	-	transcript1872.chr7.nic@URGCP	transcript1872.chr7.nic	protein_coding	43906562,43887790,43887415,43881907,43881659,43879668,43875894	43906614,43887816,43887485,43881957,43881697,43879786,43879260	Gene ID= ENSG00000106608.16 TPM= 10.51 Transcript Type= NA
chr7	43875913	43906613	43875913	43906613	-	transcript1877.chr7.nnic@URGCP	transcript1877.chr7.nnic	protein_coding	43906562,43900062,43887790,43887415,43881907,43881659,43875913	43906613,43900137,43887816,43887485,43881957,43881697,43879260	Gene ID= ENSG00000106608.16 TPM= 12.06 Transcript Type= NA
chr7	43875915	43907069	43875915	43907069	-	ENST00000453200.5@URGCP	ENST00000453200.5	protein_coding	43906562,43887790,43887415,43881907,43881659,43875915	43907069,43887816,43887485,43881957,43881697,43879260	Gene ID= ENSG00000106608.16 TPM= 63.44 Transcript Type= protein_coding
chr7	43875913	43906615	43875913	43906615	-	ENST00000402306.7@URGCP	ENST00000402306.7	protein_coding	43906562,43887415,43881907,43881659,43875913	43906615,43887485,43881957,43881697,43879260	Gene ID= ENSG00000106608.16 TPM= 16.73 Transcript Type= protein_coding
chr7	43897570	43898852	43897570	43898852	+	transcript1903.chr7.nnic@NA	transcript1903.chr7.nnic	NA	43897570	43898852	Gene ID= novel_gene_chr7_1904 TPM= 2.34 Transcript Type= NA
chr7	43905198	43906624	43905198	43906624	-	transcript1913.chr7.nnic@NA	transcript1913.chr7.nnic	NA	43905198	43906624	Gene ID= novel_gene_chr7_1914 TPM= 2.34 Transcript Type= NA
chr7	43926444	43956136	43926444	43956136	+	ENST00000222402.7@UBE2D4	ENST00000222402.7	protein_coding	43926444,43938431,43942826,43942954,43948632,43950599,43952650	43926556,43938494,43942857,43943031,43948737,43950692,43956136	Gene ID= ENSG00000078967.12 TPM= 15.18 Transcript Type= protein_coding
chr7	44000871	44002338	44000871	44002338	+	transcript1905.chr7.nnic@NA	transcript1905.chr7.nnic	NA	44000871	44002338	Gene ID= novel_gene_chr7_1906 TPM= 7.01 Transcript Type= NA
chr7	44044639	44061716	44044639	44061716	+	transcript1853.chr7.nnic@DBNL	transcript1853.chr7.nnic	protein_coding	44044639,44050225,44052911,44056757,44057782,44058129,44058432,44058902,44059354,44059543,44060048,44060777	44044820,44050251,44052941,44056903,44057859,44058280,44058480,44058983,44059449,44059658,44060153,44061716	Gene ID= ENSG00000136279.20 TPM= 13.43 Transcript Type= NA
chr7	44044711	44061637	44044711	44061637	+	ENST00000468694.5@DBNL	ENST00000468694.5	protein_coding	44044711,44050225,44051830,44052867,44056757,44057782,44058129,44058429,44058878,44059354,44059543,44060048,44060777	44044820,44050280,44051942,44052941,44056903,44057859,44058280,44058480,44058983,44059449,44059658,44060153,44061637	Gene ID= ENSG00000136279.20 TPM= 29.19 Transcript Type= protein_coding
chr7	44044717	44061716	44044717	44061716	+	ENST00000494774.5@DBNL	ENST00000494774.5	protein_coding	44044717,44050225,44051830,44052867,44056757,44057782,44058129,44058429,44058902,44059354,44059543,44060048,44060777	44044820,44050280,44051942,44052941,44056903,44057859,44058280,44058480,44058983,44059449,44059658,44060153,44061716	Gene ID= ENSG00000136279.20 TPM= 67.14 Transcript Type= protein_coding
chr7	44061515	44069253	44061515	44069253	+	transcript1898.chr7.nnic@AC017116.1	transcript1898.chr7.nnic	sense_overlapping	44061515,44065982,44068547	44065517,44066077,44069253	Gene ID= ENSG00000239775.1 TPM= 9.34 Transcript Type= NA
chr7	44065055	44069234	44065055	44069234	+	transcript1907.chr7.nnic@NA	transcript1907.chr7.nnic	NA	44065055	44069234	Gene ID= novel_gene_chr7_1908 TPM= 4.67 Transcript Type= NA
chr7	44072247	44082540	44072247	44082540	-	ENST00000242248.9@POLM	ENST00000242248.9	protein_coding	44082251,44080733,44079861,44079571,44078740,44076509,44074398,44074131,44073783,44073625,44072247	44082540,44080916,44079959,44079741,44078811,44076629,44074530,44074233,44074025,44073708,44073377	Gene ID= ENSG00000122678.16 TPM= 6.13 Transcript Type= protein_coding
chr7	44072250	44082518	44072250	44082518	-	transcript1918.chr7.nic@POLM	transcript1918.chr7.nic	protein_coding	44082251,44080733,44079861,44079571,44078740,44076509,44074398,44074131,44073783,44073625,44072250	44082518,44080916,44079959,44079741,44078811,44076629,44074530,44074233,44074025,44073708,44073430	Gene ID= ENSG00000122678.16 TPM= 6.13 Transcript Type= NA
chr7	44072247	44082518	44072247	44082518	-	transcript1923.chr7.nic@POLM	transcript1923.chr7.nic	protein_coding	44082251,44080733,44079861,44079571,44078756,44074398,44073783,44073625,44072247	44082518,44080916,44079959,44079741,44078811,44074530,44074025,44073708,44073377	Gene ID= ENSG00000122678.16 TPM= 2.63 Transcript Type= NA
chr7	44072247	44082464	44072247	44082464	-	ENST00000335195.10@POLM	ENST00000335195.10	protein_coding	44082251,44080733,44079861,44079571,44078740,44076509,44074398,44073783,44073625,44072247	44082464,44080916,44079959,44079741,44078811,44076629,44074522,44074025,44073708,44073377	Gene ID= ENSG00000122678.16 TPM= 1.46 Transcript Type= protein_coding
chr7	44075719	44082478	44075719	44082478	-	ENST00000492605.5@POLM	ENST00000492605.5	protein_coding	44082251,44080733,44079861,44079571,44078756,44075719	44082478,44080916,44079959,44079741,44078811,44076629	Gene ID= ENSG00000122678.16 TPM= 1.17 Transcript Type= retained_intron
chr7	44104361	44114560	44104361	44114560	+	ENST00000223357.7@AEBP1	ENST00000223357.7	protein_coding	44104361,44106546,44107439,44107629,44107809,44108007,44108899,44109107,44109288,44110015,44110207,44110725,44110913,44111154,44111507,44111854,44112142,44112558,44112991,44113252,44113594	44104918,44106887,44107510,44107700,44107931,44108084,44108976,44109184,44109341,44110124,44110346,44110809,44111057,44111239,44111630,44112050,44112321,44112909,44113130,44113351,44114560	Gene ID= ENSG00000106624.10 TPM= 364.67 Transcript Type= protein_coding
chr7	44114681	44123559	44114681	44123559	-	ENST00000610533.4@POLD2	ENST00000610533.4	protein_coding	44123511,44121834,44117943,44117619,44117133,44116817,44116430,44116115,44115766,44115295,44114681	44123559,44122109,44118064,44117742,44117247,44117015,44116510,44116272,44115893,44115396,44114945	Gene ID= ENSG00000106628.10 TPM= 106.25 Transcript Type= protein_coding
chr7	44114686	44116575	44114686	44116575	-	transcript1969.chr7.nnic@NA	transcript1969.chr7.nnic	NA	44114686	44116575	Gene ID= novel_gene_chr7_1970 TPM= 3.5 Transcript Type= NA
chr7	44201049	44214294	44201049	44214294	+	ENST00000223369.2@YKT6	ENST00000223369.2	protein_coding	44201049,44204568,44206385,44207388,44208133,44211023,44212247	44201239,44204650,44206485,44207492,44208198,44211124,44214294	Gene ID= ENSG00000106636.7 TPM= 30.36 Transcript Type= protein_coding
chr7	44383591	44490913	44383591	44490913	-	transcript1979.chr7.nnic@NUDCD3	transcript1979.chr7.nnic	protein_coding	44490409,44484968,44427571,44413191,44404440,44392297,44383591	44490913,44485284,44427703,44413283,44404583,44392485,44386121	Gene ID= ENSG00000015676.17 TPM= 30.36 Transcript Type= NA
chr7	44414626	44421502	44414626	44421502	+	transcript1985.chr7.nnic@NA	transcript1985.chr7.nnic	NA	44414626	44421502	Gene ID= novel_gene_chr7_1986 TPM= 4.67 Transcript Type= NA
chr7	44478595	44480991	44478595	44480991	+	transcript1987.chr7.nnic@NA	transcript1987.chr7.nnic	NA	44478595	44480991	Gene ID= novel_gene_chr7_1988 TPM= 8.17 Transcript Type= NA
chr7	44489913	44490653	44489913	44490653	-	transcript1989.chr7.nnic@NA	transcript1989.chr7.nnic	NA	44489913	44490653	Gene ID= novel_gene_chr7_1990 TPM= 5.84 Transcript Type= NA
chr7	44565804	44573895	44565804	44573895	-	ENST00000446987.5@DDX56	ENST00000446987.5	protein_coding	44573836,44573583,44572890,44572563,44572347,44571492,44570758,44570015,44569809,44569130,44568903,44568118,44566448,44565804	44573895,44573744,44573050,44572744,44572437,44571736,44570877,44570128,44569903,44569203,44568992,44568223,44566524,44566079	Gene ID= ENSG00000136271.10 TPM= 63.05 Transcript Type= nonsense_mediated_decay
chr7	44565819	44573758	44565819	44573758	-	ENST00000485367.5@DDX56	ENST00000485367.5	protein_coding	44573583,44572890,44572574,44572347,44571492,44570758,44570015,44569809,44569130,44568903,44568118,44566448,44565819	44573758,44573050,44572744,44572437,44571736,44570877,44570128,44569903,44569203,44568992,44568223,44566524,44566079	Gene ID= ENSG00000136271.10 TPM= 1.17 Transcript Type= processed_transcript
chr7	44577894	44582259	44577894	44582259	-	ENST00000457408.6@TMED4	ENST00000457408.6	protein_coding	44582047,44581723,44581449,44581093,44577894	44582259,44581823,44581574,44581239,44579628	Gene ID= ENSG00000158604.14 TPM= 35.61 Transcript Type= protein_coding
chr7	44577894	44582243	44577894	44582243	-	transcript1999.chr7.nic@TMED4	transcript1999.chr7.nic	protein_coding	44581723,44581449,44581093,44577894	44582243,44581574,44581239,44579628	Gene ID= ENSG00000158604.14 TPM= 5.25 Transcript Type= NA
chr7	44579897	44582231	44579897	44582231	-	ENST00000481238.1@TMED4	ENST00000481238.1	protein_coding	44582047,44581723,44581449,44579897	44582231,44581823,44581574,44581239	Gene ID= ENSG00000158604.14 TPM= 30.36 Transcript Type= protein_coding
chr7	44606547	44625078	44606547	44625078	+	transcript2016.chr7.nic@OGDH	transcript2016.chr7.nic	protein_coding	44606547,44624317	44606653,44625078	Gene ID= ENSG00000105953.14 TPM= 3.5 Transcript Type= NA
chr7	44606639	44709066	44606639	44709066	+	ENST00000222673.5@OGDH	ENST00000222673.5	protein_coding	44606639,44624317,44645327,44647657,44666736,44673787,44674411,44675178,44675970,44681720,44693825,44694424,44696025,44696429,44696914,44697370,44697604,44698192,44700141,44701543,44707225,44707582,44707879	44606653,44624565,44645518,44647759,44666851,44673941,44674557,44675268,44676149,44681848,44694004,44694576,44696127,44696557,44697064,44697497,44697782,44698263,44700269,44701615,44707388,44707736,44709066	Gene ID= ENSG00000105953.14 TPM= 130.77 Transcript Type= protein_coding
chr7	44748830	44769876	44748830	44769876	+	transcript2017.chr7.nnic@ZMIZ2	transcript2017.chr7.nnic	protein_coding	44748830,44756188,44756425,44756947,44757378,44757848,44759281,44760151,44760425,44761449,44762881,44763256,44764419,44764941,44765335,44765967,44766164,44766421,44767516,44769455	44748991,44756299,44756539,44757149,44757561,44758108,44759460,44760228,44760593,44761905,44762986,44763413,44764486,44765009,44765579,44766056,44766333,44766663,44769224,44769876	Gene ID= ENSG00000122515.14 TPM= 10.51 Transcript Type= NA
chr7	44796681	44801631	44796681	44801631	+	ENST00000355968.10@PPIA	ENST00000355968.10	protein_coding	44796681,44798748,44799247,44799392,44799702,44801287	44796793,44798814,44799277,44799480,44799874,44801631	Gene ID= ENSG00000196262.13 TPM= 13.43 Transcript Type= protein_coding
chr7	44796681	44801630	44796681	44801630	+	ENST00000489459.5@PPIA	ENST00000489459.5	protein_coding	44796681,44798748,44799247,44799392,44799702,44801287	44796793,44798904,44799277,44799480,44799874,44801630	Gene ID= ENSG00000196262.13 TPM= 21.6 Transcript Type= protein_coding
chr7	44796680	44803117	44796680	44803117	+	ENST00000468812.5@PPIA	ENST00000468812.5	protein_coding	44796680,44799247,44799392,44799702,44801287	44796793,44799277,44799480,44799874,44803117	Gene ID= ENSG00000196262.13 TPM= 102.75 Transcript Type= protein_coding
chr7	44826791	44848077	44826791	44848077	-	ENST00000222690.10@H2AFV	ENST00000222690.10	protein_coding	44847969,44843277,44840899,44835529,44826791	44848077,44843354,44841012,44835658,44830163	Gene ID= ENSG00000105968.18 TPM= 46.7 Transcript Type= protein_coding
chr7	44834228	44848076	44834228	44848076	-	ENST00000350771.7@H2AFV	ENST00000350771.7	protein_coding	44847969,44840899,44835529,44834228	44848076,44841012,44835658,44834562	Gene ID= ENSG00000105968.18 TPM= 1.75 Transcript Type= protein_coding
chr7	44834228	44848063	44834228	44848063	-	ENST00000308153.8@H2AFV	ENST00000308153.8	protein_coding	44847969,44843277,44840899,44835529,44834228	44848063,44843354,44841012,44835658,44834562	Gene ID= ENSG00000105968.18 TPM= 43.78 Transcript Type= protein_coding
chr7	44834239	44848080	44834239	44848080	-	ENST00000381124.9@H2AFV	ENST00000381124.9	protein_coding	44847969,44843277,44840899,44834239	44848080,44843354,44841012,44834562	Gene ID= ENSG00000105968.18 TPM= 2.34 Transcript Type= protein_coding
chr7	44882938	44885511	44882938	44885511	-	transcript2059.chr7.nnic@NA	transcript2059.chr7.nnic	NA	44882938	44885511	Gene ID= novel_gene_chr7_2060 TPM= 25.69 Transcript Type= NA
chr7	44958999	44960909	44958999	44960909	-	ENST00000568457.1@AC004847.1	ENST00000568457.1	sense_overlapping	44958999	44960909	Gene ID= ENSG00000260997.1 TPM= 1.17 Transcript Type= sense_overlapping
chr7	44962666	44979098	44962666	44979098	-	ENST00000258787.11@MYO1G	ENST00000258787.11	protein_coding	44978867,44976863,44976564,44975484,44975174,44972115,44971673,44970835,44970592,44970040,44969705,44969413,44967884,44967605,44966672,44966073,44965637,44964945,44964415,44964049,44962970,44962666	44979098,44977071,44976657,44975649,44975227,44972225,44971789,44971059,44970737,44970154,44969875,44969483,44967958,44967737,44966838,44966280,44965860,44965089,44964519,44964162,44963124,44962895	Gene ID= ENSG00000136286.14 TPM= 36.2 Transcript Type= protein_coding
chr7	44983023	44986834	44983023	44986834	-	ENST00000578968.5@SNHG15	ENST00000578968.5	lincRNA	44986525,44986021,44984357,44983822,44983023	44986834,44986097,44984426,44984046,44983322	Gene ID= ENSG00000232956.8 TPM= 17.51 Transcript Type= lincRNA
chr7	45000168	45076453	45000168	45076453	+	transcript2075.chr7.nic@CCM2	transcript2075.chr7.nic	protein_coding	45000168,45038253,45063918,45064463,45068443,45069826,45071750,45072726,45073460,45074270,45075777	45000363,45038426,45064001,45064646,45068579,45069961,45071872,45072783,45073571,45074408,45076453	Gene ID= ENSG00000136280.15 TPM= 6.59 Transcript Type= NA
chr7	45027634	45076469	45027634	45076469	+	ENST00000381112.7@CCM2	ENST00000381112.7	protein_coding	45027634,45038253,45063918,45064463,45068443,45069826,45072726,45073460,45074270,45075777	45027797,45038426,45064001,45064646,45068579,45069961,45072783,45073571,45074408,45076469	Gene ID= ENSG00000136280.15 TPM= 5.58 Transcript Type= protein_coding
chr7	45000185	45076467	45000185	45076467	+	ENST00000258781.10@CCM2	ENST00000258781.10	protein_coding	45000185,45038253,45063918,45064463,45068443,45069826,45072726,45073460,45074270,45075777	45000363,45038426,45064001,45064646,45068579,45069961,45072783,45073571,45074408,45076467	Gene ID= ENSG00000136280.15 TPM= 135.18 Transcript Type= protein_coding
chr7	45000188	45076469	45000188	45076469	+	ENST00000541586.5@CCM2	ENST00000541586.5	protein_coding	45000188,45063918,45064463,45068443,45069826,45072726,45073460,45074270,45075777	45000363,45064001,45064646,45068579,45069961,45072783,45073571,45074408,45076469	Gene ID= ENSG00000136280.15 TPM= 33.02 Transcript Type= protein_coding
chr7	45000188	45076469	45000188	45076469	+	ENST00000544363.5@CCM2	ENST00000544363.5	protein_coding	45000188,45038253,45063918,45064463,45072726,45073460,45074270,45075777	45000363,45038426,45064001,45064646,45072783,45073571,45074408,45076469	Gene ID= ENSG00000136280.15 TPM= 8.1 Transcript Type= protein_coding
chr7	45019061	45021387	45019061	45021387	-	transcript2100.chr7.nnic@NA	transcript2100.chr7.nnic	NA	45019061	45021387	Gene ID= novel_gene_chr7_2101 TPM= 7.01 Transcript Type= NA
chr7	45039757	45042273	45039757	45042273	+	transcript2096.chr7.nnic@NA	transcript2096.chr7.nnic	NA	45039757	45042273	Gene ID= novel_gene_chr7_2097 TPM= 2.34 Transcript Type= NA
chr7	45067199	45068741	45067199	45068741	-	transcript2098.chr7.nnic@NA	transcript2098.chr7.nnic	NA	45067199	45068741	Gene ID= novel_gene_chr7_2099 TPM= 3.5 Transcript Type= NA
chr7	45100100	45111727	45100100	45111727	-	transcript2103.chr7.nic@TBRG4	transcript2103.chr7.nic	protein_coding	45111664,45108827,45105441,45104538,45104099,45103333,45102347,45101825,45101503,45101258,45100100	45111727,45109287,45105764,45104709,45104256,45103443,45102491,45102070,45101614,45101372,45100426	Gene ID= ENSG00000136270.13 TPM= 8.47 Transcript Type= NA
chr7	45100100	45112047	45100100	45112047	-	ENST00000395655.8@TBRG4	ENST00000395655.8	protein_coding	45111664,45108827,45105441,45103333,45102347,45101825,45101503,45101258,45100100	45112047,45109287,45105764,45103443,45102491,45102070,45101614,45101372,45100426	Gene ID= ENSG00000136270.13 TPM= 2.04 Transcript Type= protein_coding
chr7	45100100	45111737	45100100	45111737	-	transcript2110.chr7.nnic@TBRG4	transcript2110.chr7.nnic	protein_coding	45111643,45108827,45104538,45103333,45102347,45101853,45101503,45101258,45100100	45111737,45109287,45105764,45104256,45102491,45102070,45101614,45101372,45100426	Gene ID= ENSG00000136270.13 TPM= 3.5 Transcript Type= NA
chr7	45100100	45111737	45100100	45111737	-	transcript2112.chr7.nnic@TBRG4	transcript2112.chr7.nnic	protein_coding	45111643,45108827,45105441,45104538,45103333,45102347,45101503,45101258,45100100	45111737,45109287,45105764,45104709,45103443,45102491,45102070,45101372,45100426	Gene ID= ENSG00000136270.13 TPM= 2.34 Transcript Type= NA
chr7	45100100	45111714	45100100	45111714	-	ENST00000258770.7@TBRG4	ENST00000258770.7	protein_coding	45111643,45108827,45105441,45104538,45104099,45103333,45102347,45101825,45101503,45101258,45100100	45111714,45109287,45105764,45104709,45104256,45103443,45102491,45102070,45101614,45101372,45100426	Gene ID= ENSG00000136270.13 TPM= 47 Transcript Type= protein_coding
chr7	45100100	45111718	45100100	45111718	-	ENST00000361278.7@TBRG4	ENST00000361278.7	protein_coding	45111643,45108827,45105441,45103333,45102347,45101825,45101503,45101258,45100100	45111718,45109287,45105764,45103443,45102491,45102070,45101614,45101372,45100426	Gene ID= ENSG00000136270.13 TPM= 14.89 Transcript Type= protein_coding
chr7	45100101	45111706	45100101	45111706	-	ENST00000494076.5@TBRG4	ENST00000494076.5	protein_coding	45111643,45108827,45105441,45104538,45104099,45103333,45102347,45101825,45101503,45101258,45100101	45111706,45109243,45105764,45104709,45104256,45103443,45102491,45102070,45101614,45101372,45100426	Gene ID= ENSG00000136270.13 TPM= 1.17 Transcript Type= protein_coding
chr7	45157790	45184250	45157790	45184250	+	transcript2136.chr7.nnic@RAMP3	transcript2136.chr7.nnic	protein_coding	45157790,45162258,45163698,45177309,45183157	45157886,45162421,45163866,45177441,45184250	Gene ID= ENSG00000122679.8 TPM= 27.44 Transcript Type= NA
chr7	45157702	45184248	45157702	45184248	+	transcript2157.chr7.nic@RAMP3	transcript2157.chr7.nic	protein_coding	45157702,45177309	45157886,45184248	Gene ID= ENSG00000122679.8 TPM= 23.35 Transcript Type= NA
chr7	45157793	45184250	45157793	45184250	+	transcript2158.chr7.nnic@RAMP3	transcript2158.chr7.nnic	protein_coding	45157793,45183157	45157886,45184250	Gene ID= ENSG00000122679.8 TPM= 8.17 Transcript Type= NA
chr7	45157791	45184250	45157791	45184250	+	ENST00000242249.8@RAMP3	ENST00000242249.8	protein_coding	45157791,45177309,45183157	45157886,45177441,45184250	Gene ID= ENSG00000122679.8 TPM= 758.94 Transcript Type= protein_coding
chr7	45157791	45160369	45157791	45160369	+	transcript2160.chr7.nnic@NA	transcript2160.chr7.nnic	NA	45157791	45160369	Gene ID= novel_gene_chr7_2161 TPM= 24.52 Transcript Type= NA
chr7	45170930	45174805	45170930	45174805	-	transcript2162.chr7.nnic@NA	transcript2162.chr7.nnic	NA	45170930	45174805	Gene ID= novel_gene_chr7_2163 TPM= 9.34 Transcript Type= NA
chr7	45200640	45208129	45200640	45208129	+	transcript2169.chr7.nnic@NA	transcript2169.chr7.nnic	NA	45200640,45204135	45202998,45208129	Gene ID= novel_gene_chr7_2170 TPM= 4.67 Transcript Type= NA
chr7	45717292	45720527	45717292	45720527	+	transcript2176.chr7.nnic@NA	transcript2176.chr7.nnic	NA	45717292	45720527	Gene ID= novel_gene_chr7_2177 TPM= 5.84 Transcript Type= NA
chr7	45723788	45769007	45723788	45769007	-	transcript2179.chr7.nic@SEPT7P2	transcript2179.chr7.nic	transcribed_unprocessed_pseudogene	45768660,45759074,45758043,45756909,45751529,45748626,45747215,45744997,45736787,45728178,45726184,45724353,45723788	45769007,45759174,45758177,45756992,45751646,45748714,45747311,45745048,45736910,45728313,45726236,45724480,45724023	Gene ID= ENSG00000214765.8 TPM= 2.34 Transcript Type= NA
chr7	45723788	45769007	45723788	45769007	-	transcript2183.chr7.nnic@SEPT7P2	transcript2183.chr7.nnic	transcribed_unprocessed_pseudogene	45768660,45759074,45758043,45756909,45751529,45748626,45747215,45744997,45736787,45728178,45726184,45723788	45769007,45759174,45758177,45756992,45751646,45748714,45747311,45745048,45736910,45728313,45726236,45724023	Gene ID= ENSG00000214765.8 TPM= 2.34 Transcript Type= NA
chr7	45726333	45769007	45726333	45769007	-	transcript2186.chr7.nnic@SEPT7P2	transcript2186.chr7.nnic	transcribed_unprocessed_pseudogene	45768660,45759074,45758043,45756909,45751529,45748626,45747215,45744997,45736787,45728178,45726333	45769007,45759174,45758177,45756992,45751646,45748714,45747311,45745048,45736910,45728313,45726861	Gene ID= ENSG00000214765.8 TPM= 8.17 Transcript Type= NA
chr7	47275154	47328276	47275154	47328276	-	transcript2205.chr7.nnic@TNS3	transcript2205.chr7.nnic	protein_coding	47327981,47304832,47302950,47302186,47297082,47293733,47292828,47291955,47283697,47280286,47280164,47275154	47328276,47305003,47303584,47302272,47297213,47293828,47292905,47292032,47283865,47280354,47280190,47278220	Gene ID= ENSG00000136205.16 TPM= 115.59 Transcript Type= NA
chr7	47275154	47582144	47275154	47582144	-	ENST00000311160.13@TNS3	ENST00000311160.13	protein_coding	47582051,47529036,47506907,47481103,47442003,47439487,47437263,47435282,47428312,47424101,47415094,47413937,47411727,47400785,47400393,47396800,47368365,47346187,47344924,47344755,47304832,47302950,47302186,47297082,47293733,47292828,47291955,47283697,47280286,47280164,47275154	47582144,47529147,47506944,47481141,47442055,47439658,47437313,47435404,47428376,47424184,47415206,47413997,47411802,47400914,47400458,47396904,47369621,47346356,47345038,47344838,47305003,47303584,47302272,47297213,47293828,47292905,47292032,47283865,47280354,47280190,47278220	Gene ID= ENSG00000136205.16 TPM= 78.23 Transcript Type= protein_coding
chr7	47568273	47572870	47568273	47572870	+	transcript2208.chr7.nnic@NA	transcript2208.chr7.nnic	NA	47568273	47572870	Gene ID= novel_gene_chr7_2209 TPM= 2.34 Transcript Type= NA
chr7	47963288	47979648	47963288	47979648	-	transcript2212.chr7.nic@HUS1	transcript2212.chr7.nic	protein_coding	47979468,47978689,47978417,47976730,47975613,47969219,47967806,47965300,47963288	47979648,47978816,47978593,47976837,47975687,47969318,47967925,47965438,47964632	Gene ID= ENSG00000136273.11 TPM= 5.84 Transcript Type= NA
chr7	47965166	47979553	47965166	47979553	-	ENST00000432325.5@HUS1	ENST00000432325.5	protein_coding	47979410,47978689,47978417,47976730,47975613,47969219,47967806,47965166	47979553,47978816,47978593,47976837,47975687,47969318,47967925,47965438	Gene ID= ENSG00000136273.11 TPM= 2.34 Transcript Type= protein_coding
chr7	47963288	47979568	47963288	47979568	-	transcript2221.chr7.nnic@HUS1	transcript2221.chr7.nnic	protein_coding	47979468,47978689,47978417,47976730,47975613,47965300,47963288	47979568,47978816,47978593,47976837,47975687,47965438,47964632	Gene ID= ENSG00000136273.11 TPM= 2.34 Transcript Type= NA
chr7	47955370	47961762	47955370	47961762	-	transcript2228.chr7.nnic@NA	transcript2228.chr7.nnic	NA	47955370	47961762	Gene ID= novel_gene_chr7_2229 TPM= 26.85 Transcript Type= NA
chr7	47958565	47960412	47958565	47960412	+	transcript2226.chr7.nnic@NA	transcript2226.chr7.nnic	NA	47958565	47960412	Gene ID= novel_gene_chr7_2227 TPM= 29.19 Transcript Type= NA
chr7	47959894	47962740	47959894	47962740	+	transcript2224.chr7.nnic@NA	transcript2224.chr7.nnic	NA	47959894	47962740	Gene ID= novel_gene_chr7_2225 TPM= 10.51 Transcript Type= NA
chr7	48088644	48108733	48088644	48108733	+	ENST00000331803.8@UPP1	ENST00000331803.8	protein_coding	48088644,48089212,48090250,48094763,48099670,48101824,48103297,48106873,48107361,48108218	48088923,48089418,48090364,48094827,48099787,48101982,48103411,48107082,48107507,48108733	Gene ID= ENSG00000183696.13 TPM= 1.75 Transcript Type= protein_coding
chr7	48089237	48108419	48089237	48108419	+	ENST00000395564.8@UPP1	ENST00000395564.8	protein_coding	48089237,48090188,48094763,48099670,48101824,48103297,48106873,48107361,48108218	48089418,48090364,48094827,48099787,48101982,48103411,48107082,48107507,48108419	Gene ID= ENSG00000183696.13 TPM= 36.78 Transcript Type= protein_coding
chr7	48089265	48108419	48089265	48108419	+	ENST00000395560.7@UPP1	ENST00000395560.7	protein_coding	48089265,48090188,48094763,48106873,48107361,48108218	48089418,48090364,48094827,48107082,48107507,48108419	Gene ID= ENSG00000183696.13 TPM= 5.84 Transcript Type= nonsense_mediated_decay
chr7	50304054	50403327	50304054	50403327	+	transcript2248.chr7.nnic@IKZF1	transcript2248.chr7.nnic	protein_coding	50304054,50319048,50327638,50376533,50382540,50387345,50391729,50399918	50304530,50319101,50327757,50376793,50382707,50387470,50391863,50403327	Gene ID= ENSG00000185811.17 TPM= 7.01 Transcript Type= NA
chr7	50337804	50339757	50337804	50339757	+	transcript2254.chr7.nnic@NA	transcript2254.chr7.nnic	NA	50337804	50339757	Gene ID= novel_gene_chr7_2255 TPM= 2.34 Transcript Type= NA
chr7	50345466	50345697	50345466	50345697	+	transcript2256.chr7.nnic@NA	transcript2256.chr7.nnic	NA	50345466	50345697	Gene ID= novel_gene_chr7_2257 TPM= 2.34 Transcript Type= NA
chr7	50444129	50450390	50444129	50450390	-	ENST00000615084.4@FIGNL1	ENST00000615084.4	protein_coding	50450301,50448181,50444129	50450390,50448289,50447297	Gene ID= ENSG00000132436.11 TPM= 1.17 Transcript Type= protein_coding
chr7	50444129	50450390	50444129	50450390	-	ENST00000617389.4@FIGNL1	ENST00000617389.4	protein_coding	50450301,50444129	50450390,50447297	Gene ID= ENSG00000132436.11 TPM= 1.17 Transcript Type= protein_coding
chr7	50444133	50450350	50444133	50450350	-	ENST00000395556.6@FIGNL1	ENST00000395556.6	protein_coding	50450301,50449563,50448181,50444133	50450350,50449723,50448289,50447297	Gene ID= ENSG00000132436.11 TPM= 1.17 Transcript Type= protein_coding
chr7	50592580	50793453	50592580	50793453	-	transcript2279.chr7.nic@GRB10	transcript2279.chr7.nic	protein_coding	50793224,50755887,50732272,50710875,50703821,50674436,50669722,50626822,50619170,50618071,50616210,50614770,50612741,50606337,50605290,50604311,50603998,50595437,50592580	50793453,50756056,50732368,50710990,50703908,50674658,50669863,50626978,50619285,50618139,50616347,50614880,50612839,50606414,50605406,50604377,50604085,50595530,50593098	Gene ID= ENSG00000106070.17 TPM= 2.34 Transcript Type= NA
chr7	50592580	50793489	50592580	50793489	-	transcript2285.chr7.nic@GRB10	transcript2285.chr7.nic	protein_coding	50793224,50755887,50732272,50703821,50674436,50669722,50626822,50619170,50618071,50616210,50614770,50612741,50606337,50605290,50604311,50603998,50595437,50592580	50793489,50756056,50732368,50703908,50674658,50669863,50626978,50619285,50618139,50616347,50614880,50612839,50606414,50605406,50604377,50604085,50595530,50593098	Gene ID= ENSG00000106070.17 TPM= 3.5 Transcript Type= NA
chr7	50592580	50793460	50592580	50793460	-	transcript2289.chr7.nic@GRB10	transcript2289.chr7.nic	protein_coding	50793224,50732272,50703821,50674436,50669722,50626822,50619170,50618071,50616210,50614770,50612741,50606337,50605290,50604311,50603998,50595437,50592580	50793460,50732368,50703908,50674658,50669863,50626978,50619285,50618139,50616347,50614880,50612839,50606414,50605406,50604377,50604085,50595530,50593098	Gene ID= ENSG00000106070.17 TPM= 2.34 Transcript Type= NA
chr7	50592580	50793452	50592580	50793452	-	transcript2291.chr7.nnic@GRB10	transcript2291.chr7.nnic	protein_coding	50793224,50755887,50732272,50674436,50669722,50626822,50619170,50618071,50616210,50614770,50612741,50606337,50605290,50604311,50603998,50595437,50592580	50793452,50756056,50732368,50674658,50669863,50626978,50619285,50618139,50616347,50614880,50612839,50606414,50605406,50604377,50604085,50595530,50593098	Gene ID= ENSG00000106070.17 TPM= 2.34 Transcript Type= NA
chr7	50590063	50793462	50590063	50793462	-	ENST00000335866.7@GRB10	ENST00000335866.7	protein_coding	50793224,50755887,50703821,50674436,50669722,50626822,50619170,50618071,50616210,50614770,50612741,50606337,50605290,50604311,50603998,50595437,50590063	50793462,50756056,50703908,50674658,50669863,50626978,50619285,50618139,50616347,50614880,50612839,50606414,50605406,50604377,50604085,50595530,50593098	Gene ID= ENSG00000106070.17 TPM= 7.01 Transcript Type= protein_coding
chr7	50592610	50793436	50592610	50793436	-	ENST00000402497.5@GRB10	ENST00000402497.5	protein_coding	50793224,50703821,50674436,50669722,50626822,50619170,50618071,50616210,50614770,50612741,50606337,50605290,50604311,50603998,50595437,50592610	50793436,50703908,50674658,50669863,50626978,50619285,50618139,50616347,50614880,50612839,50606414,50605406,50604377,50604085,50595530,50593098	Gene ID= ENSG00000106070.17 TPM= 3.5 Transcript Type= protein_coding
chr7	50759639	50763130	50759639	50763130	+	transcript2307.chr7.nnic@NA	transcript2307.chr7.nnic	NA	50759639	50763130	Gene ID= novel_gene_chr7_2308 TPM= 2.34 Transcript Type= NA
chr7	51016212	51316919	51016212	51316919	-	transcript2309.chr7.nic@COBL	transcript2309.chr7.nic	protein_coding	51316593,51219741,51193379,51190850,51184102,51172456,51136158,51085166,51083058,51043383,51030812,51027712,51026546,51025109,51016212	51316919,51219944,51193589,51191078,51184199,51172530,51136331,51085304,51083228,51043692,51030909,51029591,51026665,51025231,51017568	Gene ID= ENSG00000106078.17 TPM= 9.34 Transcript Type= NA
chr7	51016213	51316818	51016213	51316818	-	ENST00000395542.6@COBL	ENST00000395542.6	protein_coding	51316593,51219741,51193379,51190850,51184102,51136158,51085166,51083058,51043383,51030812,51027712,51026546,51025109,51016213	51316818,51219944,51193589,51191078,51184199,51136331,51085304,51083228,51043692,51030909,51029591,51026665,51025231,51017568	Gene ID= ENSG00000106078.17 TPM= 5.84 Transcript Type= protein_coding
chr7	54752251	54759246	54752251	54759246	-	ENST00000352861.8@SEC61G	ENST00000352861.8	protein_coding	54759158,54757495,54755779,54752251	54759246,54757594,54755881,54752420	Gene ID= ENSG00000132432.13 TPM= 42.03 Transcript Type= protein_coding
chr7	55019018	55021186	55019018	55021186	+	transcript2323.chr7.nnic@NA	transcript2323.chr7.nnic	NA	55019018	55021186	Gene ID= novel_gene_chr7_2324 TPM= 11.68 Transcript Type= NA
chr7	55019034	55156951	55019034	55156951	+	ENST00000420316.6@EGFR	ENST00000420316.6	protein_coding	55019034,55142286,55143305,55146606,55151294,55152546,55154011,55155830,55156533,55156759	55019365,55142437,55143488,55146740,55151362,55152664,55154152,55155946,55156659,55156951	Gene ID= ENSG00000146648.17 TPM= 2.34 Transcript Type= protein_coding
chr7	55019101	55211628	55019101	55211628	+	ENST00000275493.6@EGFR	ENST00000275493.6	protein_coding	55019101,55142286,55143305,55146606,55151294,55152546,55154011,55155830,55156533,55156759,55157663,55160139,55161499,55163733,55165280,55171175,55172983,55173921,55174722,55181293,55191719,55192766,55198717,55200316,55201188,55201735,55202517,55205256	55019365,55142437,55143488,55146740,55151362,55152664,55154152,55155946,55156659,55156832,55157753,55160338,55161631,55163823,55165437,55171213,55173124,55174043,55174820,55181478,55191874,55192841,55198863,55200413,55201355,55201782,55202625,55211628	Gene ID= ENSG00000146648.17 TPM= 14.01 Transcript Type= protein_coding
chr7	55196180	55200626	55196180	55200626	-	transcript2329.chr7.nnic@NA	transcript2329.chr7.nnic	NA	55196180	55200626	Gene ID= novel_gene_chr7_2330 TPM= 4.67 Transcript Type= NA
chr7	55365448	55433742	55365448	55433742	+	ENST00000254770.2@LANCL2	ENST00000254770.2	protein_coding	55365448,55391793,55398423,55399957,55401174,55411907,55425254,55428375,55431226	55366229,55391910,55398630,55400104,55401320,55412089,55425430,55428447,55433742	Gene ID= ENSG00000132434.9 TPM= 11.68 Transcript Type= protein_coding
chr7	55461235	55462772	55461235	55462772	+	transcript2334.chr7.nnic@NA	transcript2334.chr7.nnic	NA	55461235	55462772	Gene ID= novel_gene_chr7_2335 TPM= 2.34 Transcript Type= NA
chr7	55462554	55464219	55462554	55464219	-	transcript2336.chr7.nnic@NA	transcript2336.chr7.nnic	NA	55462554	55464219	Gene ID= novel_gene_chr7_2337 TPM= 2.34 Transcript Type= NA
chr7	55470613	55572499	55470613	55572499	-	transcript2338.chr7.nnic@VOPP1	transcript2338.chr7.nnic	protein_coding	55572271,55521072,55497613,55492282,55472873,55470613	55572499,55521130,55497690,55492418,55473045,55472640	Gene ID= ENSG00000154978.12 TPM= 6.22 Transcript Type= NA
chr7	55470613	55572525	55470613	55572525	-	ENST00000285279.9@VOPP1	ENST00000285279.9	protein_coding	55572271,55521072,55497613,55492282,55470613	55572525,55521130,55497690,55492418,55473045	Gene ID= ENSG00000154978.12 TPM= 141.66 Transcript Type= protein_coding
chr7	55951819	55956501	55951819	55956501	+	ENST00000285298.8@MRPS17	ENST00000285298.8	protein_coding	55951819,55953179,55954909	55951930,55953318,55956501	Gene ID= ENSG00000239789.5 TPM= 9.34 Transcript Type= protein_coding
chr7	55964581	56000181	55964581	56000181	+	ENST00000322090.7@NIPSNAP2	ENST00000322090.7	protein_coding	55964581,55978126,55978350,55981473,55982210,55983728,55984847,55994894,55997366,55999008	55964701,55978265,55978395,55981567,55982280,55983868,55984878,55994988,55997449,56000181	Gene ID= ENSG00000146729.9 TPM= 93.41 Transcript Type= protein_coding
chr7	55964581	56000181	55964581	56000181	+	ENST00000446778.5@NIPSNAP2	ENST00000446778.5	protein_coding	55964581,55978126,55981473,55983728,55984847,55994894,55997366,55999008	55964701,55978265,55981567,55983868,55984878,55994988,55997449,56000181	Gene ID= ENSG00000146729.9 TPM= 2.34 Transcript Type= protein_coding
chr7	56011067	56051604	56011067	56051604	-	ENST00000275605.7@PSPH	ENST00000275605.7	protein_coding	56051138,56033961,56031929,56021073,56019600,56017234,56015023,56011067	56051604,56034106,56032054,56021231,56019734,56017379,56015171,56011869	Gene ID= ENSG00000146733.13 TPM= 1.17 Transcript Type= protein_coding
chr7	56011068	56051604	56011068	56051604	-	ENST00000395471.7@PSPH	ENST00000395471.7	protein_coding	56051138,56033961,56031929,56021073,56019600,56017234,56015023,56011068	56051604,56034154,56032054,56021231,56019734,56017379,56015171,56011869	Gene ID= ENSG00000146733.13 TPM= 1.17 Transcript Type= protein_coding
chr7	56010316	56034208	56010316	56034208	-	transcript2372.chr7.nic@PSPH	transcript2372.chr7.nic	protein_coding	56033961,56031929,56021073,56019600,56017234,56015023,56010316	56034208,56032054,56021231,56019734,56017379,56015171,56011869	Gene ID= ENSG00000146733.13 TPM= 3.5 Transcript Type= NA
chr7	56051630	56063989	56051630	56063989	+	ENST00000275603.8@CCT6A	ENST00000275603.8	protein_coding	56051630,56052422,56054369,56055624,56056311,56057993,56058362,56058620,56059544,56060269,56060807,56061747,56062683,56063013	56051985,56052485,56054503,56055797,56056414,56058103,56058521,56058702,56059640,56060416,56060940,56061849,56062755,56063989	Gene ID= ENSG00000146731.10 TPM= 175.72 Transcript Type= protein_coding
chr7	56051685	56063989	56051685	56063989	+	ENST00000335503.3@CCT6A	ENST00000335503.3	protein_coding	56051685,56052422,56055624,56056311,56057993,56058362,56058620,56059544,56060269,56060807,56061747,56062683,56063013	56051985,56052485,56055797,56056414,56058103,56058521,56058702,56059640,56060416,56060940,56061849,56062755,56063989	Gene ID= ENSG00000146731.10 TPM= 4.09 Transcript Type= protein_coding
chr7	56064236	56080670	56064236	56080670	+	transcript2392.chr7.nnic@SUMF2	transcript2392.chr7.nnic	protein_coding	56064236,56068482,56072997,56074174,56074586,56076834,56078102,56078364,56078942,56079528	56064378,56068638,56073111,56074218,56074736,56076889,56078186,56078508,56079039,56080670	Gene ID= ENSG00000129103.17 TPM= 9.92 Transcript Type= NA
chr7	56064224	56080670	56064224	56080670	+	ENST00000434526.6@SUMF2	ENST00000434526.6	protein_coding	56064224,56068482,56072997,56074174,56074586,56076834,56078102,56078364,56079528	56064378,56068638,56073111,56074218,56074736,56076889,56078186,56078508,56080670	Gene ID= ENSG00000129103.17 TPM= 273.8 Transcript Type= protein_coding
chr7	56064224	56080669	56064224	56080669	+	ENST00000275607.13@SUMF2	ENST00000275607.13	protein_coding	56064224,56072997,56074174,56074586,56076834,56078102,56078364,56079528	56064378,56073111,56074218,56074736,56076889,56078186,56078508,56080669	Gene ID= ENSG00000129103.17 TPM= 12.84 Transcript Type= protein_coding
chr7	56064255	56080670	56064255	56080670	+	ENST00000342190.10@SUMF2	ENST00000342190.10	protein_coding	56064255,56068482,56072997,56074174,56074586,56076834,56078102,56079528	56064378,56068638,56073111,56074218,56074736,56076889,56078186,56080670	Gene ID= ENSG00000129103.17 TPM= 3.5 Transcript Type= protein_coding
chr7	64337758	64342248	64337758	64342248	-	transcript2419.chr7.nnic@NA	transcript2419.chr7.nnic	NA	64337758	64342248	Gene ID= novel_gene_chr7_2420 TPM= 5.84 Transcript Type= NA
chr7	64354887	64356632	64354887	64356632	+	transcript2421.chr7.nnic@NA	transcript2421.chr7.nnic	NA	64354887	64356632	Gene ID= novel_gene_chr7_2422 TPM= 3.5 Transcript Type= NA
chr7	64519878	64563106	64519878	64563106	-	transcript2424.chr7.nnic@ZNF680	transcript2424.chr7.nnic	protein_coding	64562925,64544306,64543707,64541730,64519878	64563106,64544432,64543802,64541917,64522500	Gene ID= ENSG00000173041.11 TPM= 2.34 Transcript Type= NA
chr7	64519884	64563106	64519884	64563106	-	transcript2425.chr7.nnic@ZNF680	transcript2425.chr7.nnic	protein_coding	64562925,64544306,64543707,64535819,64519884	64563106,64544432,64543802,64535936,64522500	Gene ID= ENSG00000173041.11 TPM= 3.5 Transcript Type= NA
chr7	64519884	64563106	64519884	64563106	-	ENST00000309683.10@ZNF680	ENST00000309683.10	protein_coding	64562925,64544306,64543707,64519884	64563106,64544432,64543802,64522500	Gene ID= ENSG00000173041.11 TPM= 16.35 Transcript Type= protein_coding
chr7	64519878	64563097	64519878	64563097	-	transcript2433.chr7.nnic@ZNF680	transcript2433.chr7.nnic	protein_coding	64562925,64519878	64563097,64522500	Gene ID= ENSG00000173041.11 TPM= 2.34 Transcript Type= NA
chr7	64666083	64711582	64666083	64711582	+	ENST00000620827.4@ZNF107	ENST00000620827.4	protein_coding	64666083,64691248,64691865,64706324	64666285,64691374,64691960,64711582	Gene ID= ENSG00000196247.11 TPM= 2.34 Transcript Type= protein_coding
chr7	64689355	64711023	64689355	64711023	+	ENST00000395391.1@ZNF107	ENST00000395391.1	protein_coding	64689355,64691248,64691865,64706324	64690525,64691374,64691960,64711023	Gene ID= ENSG00000196247.11 TPM= 1.17 Transcript Type= protein_coding
chr7	64794388	64833681	64794388	64833681	+	ENST00000359735.7@ZNF138	ENST00000359735.7	protein_coding	64794388,64814918,64830940,64831451	64794571,64815044,64831076,64833681	Gene ID= ENSG00000197008.9 TPM= 1.17 Transcript Type= protein_coding
chr7	64794428	64833664	64794428	64833664	+	ENST00000437743.1@ZNF138	ENST00000437743.1	protein_coding	64794428,64814059,64814918,64831451	64794571,64814147,64815044,64833664	Gene ID= ENSG00000197008.9 TPM= 1.17 Transcript Type= protein_coding
chr7	64887799	64891027	64887799	64891027	-	transcript2442.chr7.nnic@NA	transcript2442.chr7.nnic	NA	64887799	64891027	Gene ID= novel_gene_chr7_2443 TPM= 2.34 Transcript Type= NA
chr7	64903247	64929257	64903247	64929257	+	ENST00000476120.1@ZNF273	ENST00000476120.1	protein_coding	64903247,64917581,64918197,64927654	64903419,64917707,64918292,64929257	Gene ID= ENSG00000198039.11 TPM= 1.17 Transcript Type= protein_coding
chr7	64903288	64930966	64903288	64930966	+	ENST00000395375.3@ZNF273	ENST00000395375.3	protein_coding	64903288,64917030,64917581,64918197,64927654	64903419,64917118,64917707,64918292,64930966	Gene ID= ENSG00000198039.11 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr7	65038360	65074713	65038360	65074713	+	ENST00000426828.5@CCT6P3	ENST00000426828.5	transcribed_unprocessed_pseudogene	65038360,65064999,65066253,65066945,65068456,65068709,65069661,65070346,65070909,65073441,65073778	65038565,65065133,65066426,65067050,65068610,65068790,65069757,65070484,65071042,65073514,65074713	Gene ID= ENSG00000234585.6 TPM= 7.01 Transcript Type= processed_transcript
chr7	65373799	65401125	65373799	65401125	+	ENST00000328747.11@ZNF92	ENST00000328747.11	protein_coding	65373799,65387902,65388806,65398341	65374000,65388028,65388901,65401125	Gene ID= ENSG00000146757.13 TPM= 15.18 Transcript Type= protein_coding
chr7	65373799	65401135	65373799	65401135	+	ENST00000357512.3@ZNF92	ENST00000357512.3	protein_coding	65373799,65387902,65398341	65374000,65388028,65401135	Gene ID= ENSG00000146757.13 TPM= 1.17 Transcript Type= protein_coding
chr7	65373839	65401125	65373839	65401125	+	ENST00000431504.1@ZNF92	ENST00000431504.1	protein_coding	65373839,65398341	65374000,65401125	Gene ID= ENSG00000146757.13 TPM= 1.17 Transcript Type= protein_coding
chr7	65373881	65401081	65373881	65401081	+	ENST00000450302.2@ZNF92	ENST00000450302.2	protein_coding	65373881,65388806,65398341	65374000,65388901,65401081	Gene ID= ENSG00000146757.13 TPM= 1.17 Transcript Type= protein_coding
chr7	65720421	65750934	65720421	65750934	-	transcript2492.chr7.nnic@AC073107.1	transcript2492.chr7.nnic	lincRNA	65750883,65727055,65726771,65720421	65750934,65727108,65726944,65722124	Gene ID= ENSG00000272693.3 TPM= 3.5 Transcript Type= NA
chr7	65751051	65764222	65751051	65764222	+	transcript2479.chr7.nic@CCT6P1	transcript2479.chr7.nic	transcribed_unprocessed_pseudogene	65751051,65755780,65756469,65757983,65758236,65759175,65759860,65760424,65761646,65762947,65763281	65751278,65755952,65756574,65758137,65758317,65759271,65759998,65760556,65761748,65763020,65764222	Gene ID= ENSG00000228409.6 TPM= 2.34 Transcript Type= NA
chr7	65751757	65754448	65751757	65754448	-	transcript2495.chr7.nnic@NA	transcript2495.chr7.nnic	NA	65751757	65754448	Gene ID= novel_gene_chr7_2496 TPM= 2.34 Transcript Type= NA
chr7	65873267	65959563	65873267	65959563	+	ENST00000360768.3@VKORC1L1	ENST00000360768.3	protein_coding	65873267,65948671,65954074	65873565,65948780,65959563	Gene ID= ENSG00000196715.5 TPM= 17.51 Transcript Type= protein_coding
chr7	65960698	65982196	65960698	65982196	-	ENST00000447929.5@GUSB	ENST00000447929.5	protein_coding	65981974,65980224,65979399,65976015,65974919,65974526,65974295,65970282,65967731,65964323,65960698	65982196,65980409,65979541,65976202,65975071,65974704,65974441,65970366,65967907,65964458,65961063	Gene ID= ENSG00000169919.16 TPM= 25.69 Transcript Type= nonsense_mediated_decay
chr7	66075783	66092954	66075783	66092954	+	transcript2530.chr7.nic@ASL	transcript2530.chr7.nic	protein_coding	66075783,66076039,66081803,66082368,66082880,66083077,66086585,66087334,66087729,66088807,66089091,66089276,66089612,66092006,66092557,66092768	66075856,66076093,66081997,66082451,66082936,66083174,66086662,66087386,66087791,66088921,66089175,66089335,66089695,66092086,66092663,66092954	Gene ID= ENSG00000126522.16 TPM= 2.34 Transcript Type= NA
chr7	66075931	66092954	66075931	66092954	+	transcript2541.chr7.nic@ASL	transcript2541.chr7.nic	protein_coding	66075931,66082368,66082880,66083077,66086585,66086744,66087334,66087729,66088807,66089091,66089276,66089612,66092006,66092557,66092768	66076093,66082451,66082936,66083174,66086662,66086821,66087386,66087791,66088921,66089175,66089335,66089695,66092086,66092663,66092954	Gene ID= ENSG00000126522.16 TPM= 2.34 Transcript Type= NA
chr7	66075866	66093144	66075866	66093144	+	ENST00000380839.8@ASL	ENST00000380839.8	protein_coding	66075866,66081803,66082368,66082880,66083077,66086585,66087334,66087729,66088807,66089091,66089276,66089612,66092006,66092557,66092768	66076093,66081997,66082451,66082936,66083174,66086662,66087386,66087791,66088921,66089175,66089335,66089695,66092086,66092663,66093144	Gene ID= ENSG00000126522.16 TPM= 1.17 Transcript Type= protein_coding
chr7	66075874	66092931	66075874	66092931	+	ENST00000395332.7@ASL	ENST00000395332.7	protein_coding	66075874,66081803,66082368,66082880,66083077,66086585,66086744,66087334,66087729,66088807,66089091,66089276,66089612,66092006,66092557,66092768	66076093,66081997,66082451,66082936,66083174,66086662,66086821,66087386,66087791,66088921,66089175,66089335,66089695,66092086,66092663,66092931	Gene ID= ENSG00000126522.16 TPM= 8.17 Transcript Type= protein_coding
chr7	66087693	66092921	66087693	66092921	+	ENST00000493708.5@ASL	ENST00000493708.5	protein_coding	66087693,66088807,66089091,66089612,66092006,66092557,66092768	66087791,66088921,66089335,66089695,66092086,66092663,66092921	Gene ID= ENSG00000126522.16 TPM= 3.5 Transcript Type= retained_intron
chr7	66114605	66154561	66114605	66154561	+	ENST00000395326.7@CRCP	ENST00000395326.7	protein_coding	66114605,66127704,66130744,66134280,66145443,66152208	66114970,66127740,66130842,66134374,66145500,66154561	Gene ID= ENSG00000241258.6 TPM= 4.67 Transcript Type= protein_coding
chr7	66205315	66360436	66205315	66360436	+	transcript2566.chr7.nnic@TPST1	transcript2566.chr7.nnic	protein_coding	66205315,66240325,66286511,66352505,66356825,66359054	66205522,66241270,66286709,66352555,66356871,66360436	Gene ID= ENSG00000169902.13 TPM= 2.34 Transcript Type= NA
chr7	66205199	66360443	66205199	66360443	+	ENST00000304842.5@TPST1	ENST00000304842.5	protein_coding	66205199,66240325,66286511,66352505,66356825,66359895	66205522,66241270,66286709,66352555,66356871,66360443	Gene ID= ENSG00000169902.13 TPM= 16.93 Transcript Type= protein_coding
chr7	66205262	66360443	66205262	66360443	+	transcript2570.chr7.nnic@TPST1	transcript2570.chr7.nnic	protein_coding	66205262,66240325,66352505,66356825,66359895	66205522,66241270,66352555,66356871,66360443	Gene ID= ENSG00000169902.13 TPM= 2.92 Transcript Type= NA
chr7	66205334	66354551	66205334	66354551	+	transcript2572.chr7.nic@TPST1	transcript2572.chr7.nic	protein_coding	66205334,66240325,66286511,66352505	66205522,66241270,66286709,66354551	Gene ID= ENSG00000169902.13 TPM= 2.34 Transcript Type= NA
chr7	66493706	66495474	66493706	66495474	+	ENST00000445681.1@GS1-124K5.4	ENST00000445681.1	lincRNA	66493706,66495255	66494025,66495474	Gene ID= ENSG00000237310.1 TPM= 1.17 Transcript Type= lincRNA
chr7	66543283	66621987	66543283	66621987	-	transcript2604.chr7.nnic@AC006001.3	transcript2604.chr7.nnic	transcribed_unprocessed_pseudogene	66621911,66560579,66554585,66543283	66621987,66560644,66554837,66545686	Gene ID= ENSG00000229180.6 TPM= 3.5 Transcript Type= NA
chr7	66553310	66592400	66553310	66592400	-	transcript2605.chr7.nnic@AC006001.3	transcript2605.chr7.nnic	transcribed_unprocessed_pseudogene	66592257,66573385,66560579,66553310	66592400,66573550,66560675,66554837	Gene ID= ENSG00000229180.6 TPM= 2.63 Transcript Type= NA
chr7	66553310	66592400	66553310	66592400	-	transcript2613.chr7.nic@AC006001.3	transcript2613.chr7.nic	transcribed_unprocessed_pseudogene	66592257,66573385,66553310	66592400,66573550,66554837	Gene ID= ENSG00000229180.6 TPM= 2.63 Transcript Type= NA
chr7	66530297	66592386	66530297	66592386	-	ENST00000639011.1@AC006001.3	ENST00000639011.1	transcribed_unprocessed_pseudogene	66592257,66573385,66554585,66545601,66531791,66530297	66592386,66573550,66554837,66545686,66531871,66531399	Gene ID= ENSG00000229180.6 TPM= 2.34 Transcript Type= processed_transcript
chr7	66628954	66643047	66628954	66643047	+	transcript2640.chr7.nnic@KCTD7	transcript2640.chr7.nnic	protein_coding	66628954,66633275,66638253,66638856,66642876	66629208,66633444,66638391,66642516,66643047	Gene ID= ENSG00000243335.9 TPM= 3.5 Transcript Type= NA
chr7	66628767	66644015	66628767	66644015	+	ENST00000639828.1@KCTD7	ENST00000639828.1	protein_coding	66628767,66633275,66638253,66638856	66629208,66633444,66638431,66644015	Gene ID= ENSG00000243335.9 TPM= 15.18 Transcript Type= protein_coding
chr7	66740670	66811464	66740670	66811464	+	transcript2634.chr7.nnic@RABGEF1	transcript2634.chr7.nnic	protein_coding	66740670,66771883,66783700,66795511,66797374,66799323,66805140,66808886	66740792,66772039,66783841,66795592,66797506,66799414,66805396,66811464	Gene ID= ENSG00000284461.1 TPM= 2.34 Transcript Type= NA
chr7	66682114	66685692	66682114	66685692	+	transcript2651.chr7.nnic@RABGEF1	transcript2651.chr7.nnic	protein_coding	66682114,66685360	66682258,66685692	Gene ID= ENSG00000284461.1 TPM= 2.34 Transcript Type= NA
chr7	66740733	66811464	66740733	66811464	+	ENST00000284957.9@RABGEF1	ENST00000284957.9	protein_coding	66740733,66771883,66775227,66783675,66795511,66797374,66799323,66805140,66808886	66740792,66772078,66775393,66783841,66795592,66797506,66799414,66805396,66811464	Gene ID= ENSG00000154710.16 TPM= 8.17 Transcript Type= protein_coding
chr7	66689205	66689324	66689205	66689324	+	transcript2652.chr7.nnic@NA	transcript2652.chr7.nnic	NA	66689205	66689324	Gene ID= novel_gene_chr7_2653 TPM= 2.34 Transcript Type= NA
chr7	66713476	66716637	66713476	66716637	+	transcript2654.chr7.nnic@NA	transcript2654.chr7.nnic	NA	66713476	66716637	Gene ID= novel_gene_chr7_2655 TPM= 2.34 Transcript Type= NA
chr7	66921208	66958551	66921208	66958551	+	transcript2665.chr7.nnic@TMEM248	transcript2665.chr7.nnic	protein_coding	66921208,66927642,66941848,66944976,66948544,66950952,66953226,66955502	66921461,66927777,66942024,66945261,66948694,66951135,66953369,66958551	Gene ID= ENSG00000106609.16 TPM= 8.76 Transcript Type= NA
chr7	66921225	66958551	66921225	66958551	+	ENST00000341567.8@TMEM248	ENST00000341567.8	protein_coding	66921225,66941848,66944976,66948544,66950952,66953226,66955502	66921461,66942024,66945261,66948694,66951135,66953369,66958551	Gene ID= ENSG00000106609.16 TPM= 225.35 Transcript Type= protein_coding
chr7	66921209	66925931	66921209	66925931	-	transcript2673.chr7.nnic@NA	transcript2673.chr7.nnic	NA	66921209	66925931	Gene ID= novel_gene_chr7_2674 TPM= 9.34 Transcript Type= NA
chr7	66987677	66995601	66987677	66995601	-	ENST00000246868.6@SBDS	ENST00000246868.6	protein_coding	66995290,66994212,66993217,66991137,66987677	66995601,66994341,66993417,66991301,66988499	Gene ID= ENSG00000126524.9 TPM= 252.2 Transcript Type= protein_coding
chr7	66987744	66995576	66987744	66995576	-	ENST00000414306.5@SBDS	ENST00000414306.5	protein_coding	66995290,66994220,66993217,66991137,66987744	66995576,66994341,66993417,66991301,66988499	Gene ID= ENSG00000126524.9 TPM= 9.34 Transcript Type= nonsense_mediated_decay
chr7	66996815	67239514	66996815	67239514	+	ENST00000359626.9@TYW1	ENST00000359626.9	protein_coding	66996815,66998065,66998817,67009583,67014367,67017853,67024900,67049949,67055835,67067285,67083430,67098541,67117483,67183126,67195170,67238308	66996982,66998195,66998954,67009684,67014561,67018143,67025022,67050066,67055887,67067403,67083539,67098718,67117618,67183236,67195337,67239514	Gene ID= ENSG00000198874.12 TPM= 38.53 Transcript Type= protein_coding
chr7	66996815	67027510	66996815	67027510	+	transcript2690.chr7.nic@TYW1	transcript2690.chr7.nic	protein_coding	66996815,66998065,66998817,67009583,67014367,67017853,67024900	66996982,66998195,66998954,67009684,67014561,67018143,67027510	Gene ID= ENSG00000198874.12 TPM= 2.34 Transcript Type= NA
chr7	67302621	67321526	67302621	67321526	+	ENST00000416602.6@STAG3L4	ENST00000416602.6	transcribed_unprocessed_pseudogene	67302621,67305987,67308935,67309564,67320103	67302885,67306083,67309139,67309715,67321526	Gene ID= ENSG00000106610.14 TPM= 8.17 Transcript Type= processed_transcript
chr7	67302621	67332976	67302621	67332976	+	transcript2699.chr7.nnic@STAG3L4	transcript2699.chr7.nnic	transcribed_unprocessed_pseudogene	67302621,67305987,67308935,67309564,67330263	67302885,67306083,67309139,67309715,67332976	Gene ID= ENSG00000106610.14 TPM= 2.34 Transcript Type= NA
chr7	69967507	70138242	69967507	70138242	+	transcript2706.chr7.nnic@AUTS2	transcript2706.chr7.nnic	protein_coding	69967507,70118132,70134536	69967804,70118233,70138242	Gene ID= ENSG00000158321.15 TPM= 3.5 Transcript Type= NA
chr7	70692371	70694266	70692371	70694266	-	transcript2717.chr7.nnic@NA	transcript2717.chr7.nnic	NA	70692371	70694266	Gene ID= novel_gene_chr7_2718 TPM= 3.5 Transcript Type= NA
chr7	70694050	70697390	70694050	70697390	+	transcript2713.chr7.nnic@NA	transcript2713.chr7.nnic	NA	70694050	70697390	Gene ID= novel_gene_chr7_2714 TPM= 3.5 Transcript Type= NA
chr7	70768879	70772834	70768879	70772834	-	transcript2715.chr7.nnic@NA	transcript2715.chr7.nnic	NA	70768879	70772834	Gene ID= novel_gene_chr7_2716 TPM= 8.17 Transcript Type= NA
chr7	71335549	71713598	71335549	71713598	+	ENST00000618959.1@GALNT17	ENST00000618959.1	protein_coding	71335549,71388235,71415889,71420908,71571285,71665411,71669972,71677211,71710761,71712018	71335733,71388401,71416063,71421105,71571402,71665596,71670109,71677306,71710928,71713598	Gene ID= ENSG00000185274.11 TPM= 33.86 Transcript Type= protein_coding
chr7	72574515	72828198	72574515	72828198	-	ENST00000620995.4@TYW1B	ENST00000620995.4	protein_coding	72828072,72826855,72815380,72810471,72807066,72802400,72777416,72744484,72728822,72713621,72694687,72628887,72616672,72574515	72828198,72826985,72815481,72810665,72807356,72802522,72777533,72744601,72728931,72713798,72694822,72628997,72616839,72575719	Gene ID= ENSG00000277149.4 TPM= 14.01 Transcript Type= protein_coding
chr7	72829415	72837376	72829415	72837376	+	transcript2731.chr7.nic@SBDSP1	transcript2731.chr7.nic	transcribed_unprocessed_pseudogene	72829415,72831602,72833764,72836577	72829783,72831798,72833928,72837376	Gene ID= ENSG00000225648.5 TPM= 16.35 Transcript Type= NA
chr7	72829505	72837376	72829505	72837376	+	transcript2732.chr7.nic@SBDSP1	transcript2732.chr7.nic	transcribed_unprocessed_pseudogene	72829505,72831602,72833764,72836577	72830813,72831798,72833928,72837376	Gene ID= ENSG00000225648.5 TPM= 2.34 Transcript Type= NA
chr7	72829471	72837376	72829471	72837376	+	transcript2733.chr7.nnic@SBDSP1	transcript2733.chr7.nnic	transcribed_unprocessed_pseudogene	72829471,72832239,72836577	72830299,72833928,72837376	Gene ID= ENSG00000225648.5 TPM= 2.34 Transcript Type= NA
chr7	72879342	72914471	72879342	72914471	+	transcript2764.chr7.nnic@POM121	transcript2764.chr7.nnic	protein_coding	72879342,72890627,72890933,72913078	72879885,72890753,72891110,72914471	Gene ID= ENSG00000196313.11 TPM= 2.34 Transcript Type= NA
chr7	72914493	72918637	72914493	72918637	-	transcript2778.chr7.nnic@NA	transcript2778.chr7.nnic	NA	72914493	72918637	Gene ID= novel_gene_chr7_2779 TPM= 11.68 Transcript Type= NA
chr7	72946386	72952104	72946386	72952104	+	transcript2772.chr7.nnic@NA	transcript2772.chr7.nnic	NA	72946386	72952104	Gene ID= novel_gene_chr7_2773 TPM= 10.51 Transcript Type= NA
chr7	72948298	72954734	72948298	72954734	-	transcript2761.chr7.nic@NSUN5P2	transcript2761.chr7.nic	transcribed_unprocessed_pseudogene	72954625,72950058,72949846,72948892,72948298	72954734,72950196,72949961,72949491,72948808	Gene ID= ENSG00000106133.17 TPM= 3.5 Transcript Type= NA
chr7	72981482	73005944	72981482	73005944	-	transcript2748.chr7.nnic@STAG3L3	transcript2748.chr7.nnic	transcribed_unprocessed_pseudogene	73005693,73003645,73003021,72999761,72999471,72998676,72981482	73005944,73003730,73003137,72999859,72999550,72998790,72982371	Gene ID= ENSG00000174353.17 TPM= 2.34 Transcript Type= NA
chr7	72998484	73005915	72998484	73005915	-	ENST00000448173.5@STAG3L3	ENST00000448173.5	transcribed_unprocessed_pseudogene	73005693,73003645,73003021,73000358,72999761,72998484	73005915,73003730,73003137,73000481,72999859,72999550	Gene ID= ENSG00000174353.17 TPM= 7.01 Transcript Type= processed_transcript
chr7	73154890	73207296	73154890	73207296	+	transcript2785.chr7.nic@GTF2IP4	transcript2785.chr7.nic	transcribed_processed_pseudogene	73154890,73175415,73176857,73179087,73180539,73182077,73183115,73184661,73190066,73191371,73192497,73192951,73194626,73195636,73195879,73197964,73198693,73199696,73200449,73202112,73203423,73204563,73205383	73155343,73175525,73176922,73179270,73180597,73182148,73183298,73184719,73190137,73191554,73192555,73193025,73194727,73195701,73196062,73198019,73198773,73199779,73200632,73202140,73203464,73204604,73207296	Gene ID= ENSG00000233369.7 TPM= 31.03 Transcript Type= NA
chr7	73154938	73207283	73154938	73207283	+	ENST00000544802.5@GTF2IP4	ENST00000544802.5	transcribed_processed_pseudogene	73154938,73175415,73176857,73179087,73180539,73182077,73183115,73184661,73190066,73191371,73192497,73192951,73194626,73195636,73195879,73197964,73198693,73199696,73200449,73202112,73203423,73204563,73205383,73206152	73155343,73175525,73176922,73179270,73180597,73182148,73183298,73184719,73190137,73191554,73192555,73193025,73194727,73195701,73196062,73198019,73198773,73199779,73200632,73202140,73203464,73204604,73205458,73207283	Gene ID= ENSG00000233369.7 TPM= 133.4 Transcript Type= processed_transcript
chr7	73220624	73235945	73220624	73235945	+	transcript2786.chr7.nnic@NCF1B	transcript2786.chr7.nnic	transcribed_unprocessed_pseudogene	73220624,73223878,73225711,73225886,73227409,73229567,73230153,73231811,73234614,73235189,73235669	73220717,73223956,73225786,73226051,73227464,73229689,73230260,73231890,73234718,73235334,73235945	Gene ID= ENSG00000182487.12 TPM= 8.17 Transcript Type= NA
chr7	73303230	73308860	73303230	73308860	-	transcript2789.chr7.nnic@NSUN5	transcript2789.chr7.nnic	protein_coding	73308698,73308431,73307583,73307394,73304959,73304747,73304230,73303987,73303826,73303600,73303230	73308860,73308553,73307757,73307502,73305097,73304862,73304408,73304036,73303914,73303740,73303529	Gene ID= ENSG00000130305.16 TPM= 2.34 Transcript Type= NA
chr7	73303230	73308867	73303230	73308867	-	ENST00000438747.6@NSUN5	ENST00000438747.6	protein_coding	73308698,73308431,73307583,73307394,73304959,73304747,73304230,73303826,73303600,73303230	73308867,73308553,73307757,73307502,73305097,73304862,73304408,73304036,73303740,73303529	Gene ID= ENSG00000130305.16 TPM= 35.03 Transcript Type= protein_coding
chr7	73303235	73308816	73303235	73308816	-	ENST00000310326.8@NSUN5	ENST00000310326.8	protein_coding	73308698,73308431,73307583,73307394,73304959,73304747,73304230,73303826,73303600,73303235	73308816,73308553,73307757,73307502,73305097,73304862,73304408,73304036,73303740,73303524	Gene ID= ENSG00000130305.16 TPM= 2.34 Transcript Type= protein_coding
chr7	73303230	73308806	73303230	73308806	-	ENST00000252594.10@NSUN5	ENST00000252594.10	protein_coding	73308698,73308431,73307583,73307394,73304959,73304747,73304230,73303826,73303230	73308806,73308553,73307757,73307502,73305097,73304862,73304408,73304036,73303740	Gene ID= ENSG00000130305.16 TPM= 3.5 Transcript Type= protein_coding
chr7	73440398	73522272	73440398	73522272	-	ENST00000339594.8@BAZ1B	ENST00000339594.8	protein_coding	73521827,73510736,73508327,73498497,73492800,73489194,73476868,73470345,73469517,73466296,73465439,73462922,73459536,73450847,73449542,73447264,73443984,73442725,73442181,73440398	73522272,73510852,73508471,73498698,73492921,73489391,73478569,73470483,73469650,73466401,73465537,73463099,73459718,73450994,73449689,73447379,73444129,73442828,73442553,73441693	Gene ID= ENSG00000009954.10 TPM= 10.51 Transcript Type= protein_coding
chr7	73477047	73522293	73477047	73522293	-	transcript2799.chr7.nic@BAZ1B	transcript2799.chr7.nic	protein_coding	73521827,73510736,73508327,73498497,73492800,73489194,73477047	73522293,73510852,73508471,73498698,73492921,73489391,73478569	Gene ID= ENSG00000009954.10 TPM= 3.5 Transcript Type= NA
chr7	73536356	73557719	73536356	73557719	-	transcript2807.chr7.nnic@BCL7B	transcript2807.chr7.nnic	protein_coding	73557487,73552167,73543548,73539882,73537934,73536356	73557719,73552242,73543644,73540007,73538013,73537390	Gene ID= ENSG00000106635.7 TPM= 8.96 Transcript Type= NA
chr7	73536356	73557703	73536356	73557703	-	transcript2814.chr7.nic@BCL7B	transcript2814.chr7.nic	protein_coding	73557487,73553548,73552167,73539882,73537934,73536356	73557703,73553669,73552242,73540052,73538013,73537390	Gene ID= ENSG00000106635.7 TPM= 7.79 Transcript Type= NA
chr7	73536356	73558002	73536356	73558002	-	ENST00000223368.6@BCL7B	ENST00000223368.6	protein_coding	73557487,73552167,73543548,73539882,73537934,73536356	73558002,73552242,73543644,73540052,73538013,73537390	Gene ID= ENSG00000106635.7 TPM= 192.07 Transcript Type= protein_coding
chr7	73536371	73557671	73536371	73557671	-	ENST00000411832.5@BCL7B	ENST00000411832.5	protein_coding	73557487,73552167,73543548,73537934,73536371	73557671,73552242,73543644,73538013,73537390	Gene ID= ENSG00000106635.7 TPM= 7.01 Transcript Type= protein_coding
chr7	73536388	73557251	73536388	73557251	-	ENST00000482231.5@BCL7B	ENST00000482231.5	protein_coding	73557041,73552167,73543548,73539882,73537934,73536388	73557251,73552242,73543644,73540052,73538013,73537390	Gene ID= ENSG00000106635.7 TPM= 4.47 Transcript Type= processed_transcript
chr7	73568932	73578791	73568932	73578791	-	ENST00000305632.9@TBL2	ENST00000305632.9	protein_coding	73578420,73574383,73573938,73573320,73572844,73571189,73568932	73578791,73574513,73574122,73573471,73572970,73571341,73570972	Gene ID= ENSG00000106638.15 TPM= 17.51 Transcript Type= protein_coding
chr7	73569660	73578590	73569660	73578590	-	ENST00000450285.5@TBL2	ENST00000450285.5	protein_coding	73578420,73574383,73573961,73573320,73572844,73571189,73569660	73578590,73574513,73574122,73573471,73572970,73571341,73570972	Gene ID= ENSG00000106638.15 TPM= 47.87 Transcript Type= nonsense_mediated_decay
chr7	73593194	73624540	73593194	73624540	-	ENST00000313375.7@MLXIPL	ENST00000313375.7	protein_coding	73624200,73616071,73607590,73607331,73606974,73605910,73605688,73599526,73597182,73596865,73596639,73596364,73596153,73595842,73595637,73594274,73593194	73624540,73616177,73607672,73607420,73607018,73606111,73605768,73599695,73597713,73596932,73596789,73596479,73596272,73595969,73595760,73594403,73593983	Gene ID= ENSG00000009950.15 TPM= 3.5 Transcript Type= protein_coding
chr7	73667825	73672110	73667825	73672110	+	ENST00000324941.4@VPS37D	ENST00000324941.4	protein_coding	73667825,73669419,73670020,73671014	73668096,73669590,73670102,73672110	Gene ID= ENSG00000176428.5 TPM= 7.01 Transcript Type= protein_coding
chr7	73680382	73683439	73680382	73683439	-	transcript2837.chr7.nnic@NA	transcript2837.chr7.nnic	NA	73680382	73683439	Gene ID= novel_gene_chr7_2838 TPM= 5.84 Transcript Type= NA
chr7	73682275	73683452	73682275	73683452	-	transcript2835.chr7.nnic@NA	transcript2835.chr7.nnic	NA	73682275	73683452	Gene ID= novel_gene_chr7_2836 TPM= 21.02 Transcript Type= NA
chr7	73683594	73698212	73683594	73698212	+	transcript2839.chr7.nnic@BUD23	transcript2839.chr7.nnic	protein_coding	73683594,73683767,73686636,73686818,73686999,73690916,73692596,73693329,73693624,73693992,73696406,73697605,73697832	73683673,73683804,73686731,73686900,73687095,73691012,73692646,73693414,73693669,73694050,73696463,73697694,73698212	Gene ID= ENSG00000071462.11 TPM= 2.92 Transcript Type= NA
chr7	73683568	73698212	73683568	73698212	+	ENST00000265758.6@BUD23	ENST00000265758.6	protein_coding	73683568,73683767,73686636,73686818,73686999,73690916,73692596,73693329,73693624,73693992,73697605,73697832	73683673,73683804,73686731,73686900,73687095,73691012,73692646,73693414,73693669,73694050,73697694,73698212	Gene ID= ENSG00000071462.11 TPM= 55.46 Transcript Type= protein_coding
chr7	73735083	73736158	73735083	73736158	+	transcript2860.chr7.nnic@ABHD11-AS1	transcript2860.chr7.nnic	transcribed_unitary_pseudogene	73735083,73735241,73735728,73735930	73735138,73735499,73735848,73736158	Gene ID= ENSG00000225969.2 TPM= 4.67 Transcript Type= NA
chr7	73736094	73738867	73736094	73738867	-	ENST00000222800.7@ABHD11	ENST00000222800.7	protein_coding	73738646,73738328,73737562,73737221,73736929,73736094	73738867,73738463,73737735,73737391,73737110,73736691	Gene ID= ENSG00000106077.18 TPM= 12.84 Transcript Type= protein_coding
chr7	73736094	73738859	73736094	73738859	-	transcript2867.chr7.nic@ABHD11	transcript2867.chr7.nic	protein_coding	73738646,73738328,73736094	73738859,73738463,73737735	Gene ID= ENSG00000106077.18 TPM= 3.5 Transcript Type= NA
chr7	73736094	73738830	73736094	73738830	-	transcript2869.chr7.nic@ABHD11	transcript2869.chr7.nic	protein_coding	73738328,73736094	73738830,73737735	Gene ID= ENSG00000106077.18 TPM= 2.34 Transcript Type= NA
chr7	73768997	73770270	73768997	73770270	-	ENST00000395145.3@CLDN3	ENST00000395145.3	protein_coding	73768997	73770270	Gene ID= ENSG00000165215.6 TPM= 39.7 Transcript Type= protein_coding
chr7	73830863	73832693	73830863	73832693	+	ENST00000340958.3@CLDN4	ENST00000340958.3	protein_coding	73830863	73832693	Gene ID= ENSG00000189143.9 TPM= 381.8 Transcript Type= protein_coding
chr7	74027789	74069907	74027789	74069907	+	ENST00000252034.11@ELN	ENST00000252034.11	protein_coding	74027789,74035364,74036555,74037707,74041216,74042614,74042984,74043118,74043879,74045222,74046188,74046696,74047675,74048142,74048503,74051750,74051924,74053163,74054716,74056271,74056672,74057640,74059886,74060140,74060376,74061101,74063153,74063310,74063621,74065694,74065944,74066732,74068657	74028269,74035414,74036584,74037739,74041251,74042706,74043034,74043168,74043920,74045293,74046217,74046767,74047716,74048201,74048556,74051839,74051983,74053309,74054769,74056435,74056713,74057696,74060047,74060184,74060501,74061139,74063224,74063369,74063695,74065732,74065997,74066776,74069907	Gene ID= ENSG00000049540.16 TPM= 26.41 Transcript Type= protein_coding
chr7	74028129	74069907	74028129	74069907	+	transcript2897.chr7.nic@ELN	transcript2897.chr7.nic	protein_coding	74028129,74035364,74036555,74037707,74041216,74042614,74042984,74043118,74043879,74045222,74046188,74046696,74047675,74048142,74048503,74051750,74051924,74053163,74054716,74056271,74056672,74059886,74060140,74060376,74061101,74063153,74063310,74063621,74065694,74066732,74068657	74028269,74035414,74036584,74037739,74041251,74042706,74043034,74043168,74043920,74045293,74046217,74046767,74047716,74048201,74048556,74051839,74051983,74053309,74054769,74056435,74056713,74060047,74060184,74060501,74061139,74063224,74063369,74063695,74065732,74066776,74069907	Gene ID= ENSG00000049540.16 TPM= 14.33 Transcript Type= NA
chr7	74028173	74069904	74028173	74069904	+	ENST00000429192.5@ELN	ENST00000429192.5	protein_coding	74028173,74035364,74036555,74037707,74041216,74042614,74042984,74043103,74043879,74045222,74046188,74046696,74047675,74048142,74048503,74051750,74051924,74053163,74054716,74056271,74056672,74059886,74060140,74060376,74061101,74063153,74063310,74063621,74065694,74066732,74068657	74028269,74035414,74036584,74037739,74041251,74042706,74043034,74043168,74043920,74045293,74046217,74046767,74047716,74048201,74048556,74051839,74051983,74053309,74054769,74056435,74056713,74060047,74060184,74060501,74061139,74063224,74063369,74063695,74065732,74066776,74069904	Gene ID= ENSG00000049540.16 TPM= 19.49 Transcript Type= protein_coding
chr7	74028163	74069677	74028163	74069677	+	ENST00000458204.5@ELN	ENST00000458204.5	protein_coding	74028163,74035364,74037707,74041216,74042614,74042984,74043118,74043879,74045222,74046188,74046696,74047675,74048142,74048503,74051750,74051924,74053163,74054716,74056271,74056672,74057640,74059886,74060140,74060376,74061101,74063153,74063310,74063621,74065694,74065944,74066732,74068657	74028269,74035414,74037739,74041251,74042706,74043034,74043168,74043920,74045293,74046217,74046767,74047716,74048201,74048556,74051839,74051983,74053309,74054769,74056435,74056713,74057696,74060047,74060184,74060501,74061139,74063224,74063369,74063695,74065732,74065997,74066776,74069677	Gene ID= ENSG00000049540.16 TPM= 23.12 Transcript Type= protein_coding
chr7	74028175	74069678	74028175	74069678	+	ENST00000380576.9@ELN	ENST00000380576.9	protein_coding	74028175,74035364,74036555,74037707,74041216,74042614,74042984,74043118,74043879,74045222,74046188,74046696,74047675,74048142,74048503,74051750,74051924,74053163,74054716,74056271,74056672,74059886,74060140,74060376,74061101,74063153,74063310,74063621,74065694,74065944,74066732,74068657	74028269,74035414,74036584,74037739,74041251,74042706,74043034,74043168,74043920,74045293,74046217,74046767,74047716,74048201,74048556,74051839,74051983,74053309,74054769,74056435,74056713,74060047,74060184,74060501,74061139,74063224,74063369,74063695,74065732,74065997,74066776,74069678	Gene ID= ENSG00000049540.16 TPM= 27.79 Transcript Type= protein_coding
chr7	74028157	74069678	74028157	74069678	+	ENST00000380575.8@ELN	ENST00000380575.8	protein_coding	74028157,74035364,74037707,74041216,74042614,74042984,74043118,74043879,74045222,74046188,74046696,74047675,74048142,74048503,74051750,74051924,74053163,74054716,74056271,74056672,74059886,74060140,74060376,74061101,74063153,74063310,74063621,74065694,74066732,74068657	74028269,74035414,74037739,74041251,74042706,74043034,74043168,74043920,74045293,74046217,74046767,74047716,74048201,74048556,74051839,74051983,74053309,74054769,74056435,74056713,74060047,74060184,74060501,74061139,74063224,74063369,74063695,74065732,74066776,74069678	Gene ID= ENSG00000049540.16 TPM= 4.09 Transcript Type= protein_coding
chr7	74028170	74069907	74028170	74069907	+	ENST00000357036.9@ELN	ENST00000357036.9	protein_coding	74028170,74035364,74036555,74037707,74041216,74042614,74042984,74043103,74043879,74045222,74046188,74046696,74047675,74048142,74048503,74051750,74051924,74053163,74054716,74056271,74056672,74057640,74059886,74060140,74060376,74061101,74063153,74063310,74063621,74065694,74066732,74068657	74028269,74035414,74036584,74037739,74041251,74042706,74043034,74043168,74043920,74045293,74046217,74046767,74047716,74048201,74048556,74051839,74051983,74053309,74054769,74056435,74056713,74057696,74060047,74060184,74060501,74061139,74063224,74063369,74063695,74065732,74066776,74069907	Gene ID= ENSG00000049540.16 TPM= 31.84 Transcript Type= protein_coding
chr7	74028142	74031788	74028142	74031788	+	transcript2933.chr7.nnic@NA	transcript2933.chr7.nnic	NA	74028142	74031788	Gene ID= novel_gene_chr7_2934 TPM= 7.01 Transcript Type= NA
chr7	74061524	74064114	74061524	74064114	+	transcript2935.chr7.nnic@NA	transcript2935.chr7.nnic	NA	74061524	74064114	Gene ID= novel_gene_chr7_2936 TPM= 2.34 Transcript Type= NA
chr7	74102486	74103769	74102486	74103769	-	transcript2939.chr7.nnic@NA	transcript2939.chr7.nnic	NA	74102486	74103769	Gene ID= novel_gene_chr7_2940 TPM= 2.34 Transcript Type= NA
chr7	74174356	74197096	74174356	74197096	+	ENST00000353999.6@EIF4H	ENST00000353999.6	protein_coding	74174356,74187611,74189673,74189822,74194741,74195169	74174442,74187798,74189737,74189918,74194878,74197096	Gene ID= ENSG00000106682.14 TPM= 749.6 Transcript Type= protein_coding
chr7	74209418	74229831	74209418	74229831	+	ENST00000460943.5@LAT2	ENST00000460943.5	protein_coding	74209418,74214822,74215947,74216825,74219744,74219960,74220217,74220584,74220704,74221637,74223724,74224018,74224639,74228944	74210088,74215010,74216069,74216864,74219787,74220008,74220254,74220619,74220734,74221692,74223783,74224197,74224760,74229831	Gene ID= ENSG00000086730.16 TPM= 37.65 Transcript Type= protein_coding
chr7	74209927	74229831	74209927	74229831	+	transcript2957.chr7.nnic@LAT2	transcript2957.chr7.nnic	protein_coding	74209927,74214822,74215947,74216825,74219744,74219960,74220217,74220584,74220704,74221637,74223724,74224018,74224639,74228944	74210088,74215010,74216069,74216864,74219787,74220008,74220254,74220619,74220734,74221791,74223783,74224197,74224760,74229831	Gene ID= ENSG00000086730.16 TPM= 4.09 Transcript Type= NA
chr7	74209396	74229834	74209396	74229834	+	ENST00000344995.9@LAT2	ENST00000344995.9	protein_coding	74209396,74215947,74216825,74219744,74219960,74220217,74220584,74220704,74221637,74223724,74224018,74224639,74228944	74210088,74216069,74216864,74219787,74220008,74220254,74220619,74220734,74221692,74223783,74224197,74224760,74229834	Gene ID= ENSG00000086730.16 TPM= 61.01 Transcript Type= protein_coding
chr7	74210006	74229831	74210006	74229831	+	ENST00000275635.11@LAT2	ENST00000275635.11	protein_coding	74210006,74214822,74215947,74216825,74219744,74219960,74220217,74220584,74220704,74221637,74223724,74224018,74224639,74228944	74210088,74214940,74216069,74216864,74219787,74220008,74220254,74220619,74220734,74221692,74223783,74224197,74224760,74229831	Gene ID= ENSG00000086730.16 TPM= 14.3 Transcript Type= protein_coding
chr7	74231537	74254444	74231537	74254444	-	ENST00000055077.7@RFC2	ENST00000055077.7	protein_coding	74254271,74252429,74249739,74249012,74246662,74243146,74239938,74238923,74237362,74235532,74231537	74254444,74252498,74249780,74249118,74246763,74243246,74240095,74238988,74237442,74235645,74232216	Gene ID= ENSG00000049541.10 TPM= 31.53 Transcript Type= protein_coding
chr7	74231504	74254458	74231504	74254458	-	ENST00000621097.4@RFC2	ENST00000621097.4	protein_coding	74254271,74252429,74249739,74246662,74243146,74239938,74238923,74237362,74235532,74231504	74254458,74252498,74249780,74246763,74243246,74240095,74238988,74237442,74235645,74232216	Gene ID= ENSG00000049541.10 TPM= 1.17 Transcript Type= protein_coding
chr7	74289403	74389613	74289403	74389613	+	transcript2986.chr7.nic@CLIP2	transcript2986.chr7.nic	protein_coding	74289403,74317480,74338448,74353880,74356410,74357280,74360175,74364255,74375887,74380806,74386521,74389103	74289734,74317667,74339004,74354004,74356623,74357477,74360278,74364315,74376822,74380863,74386604,74389613	Gene ID= ENSG00000106665.15 TPM= 3.5 Transcript Type= NA
chr7	74289475	74405930	74289475	74405930	+	ENST00000361545.9@CLIP2	ENST00000361545.9	protein_coding	74289475,74317480,74338448,74353880,74356410,74357280,74360175,74364255,74375887,74380806,74386521,74389103,74397074,74400370,74401505,74403837	74289734,74317667,74339004,74354004,74356623,74357477,74360278,74364315,74376822,74380863,74386604,74389259,74397233,74400555,74401567,74405930	Gene ID= ENSG00000106665.15 TPM= 64.22 Transcript Type= protein_coding
chr7	74289475	74405943	74289475	74405943	+	ENST00000223398.10@CLIP2	ENST00000223398.10	protein_coding	74289475,74317480,74338448,74353880,74356410,74357280,74360175,74364255,74372932,74375887,74380806,74386521,74389103,74397074,74400370,74401505,74403837	74289734,74317667,74339004,74354004,74356623,74357477,74360278,74364315,74373036,74376822,74380863,74386604,74389259,74397233,74400555,74401567,74405943	Gene ID= ENSG00000106665.15 TPM= 11.68 Transcript Type= protein_coding
chr7	74453866	74602591	74453866	74602591	+	transcript2993.chr7.nic@GTF2IRD1	transcript2993.chr7.nic	protein_coding	74453866,74508075,74512830,74515441,74518139,74519409,74521208,74524071,74529734,74535113,74536167,74538136,74538680,74539879,74544755,74545744,74547103,74555174,74555438,74557639,74558861,74559627,74589851,74590825,74595014,74601044	74454176,74508203,74512971,74515596,74518322,74519719,74521297,74524154,74529917,74535138,74536275,74538173,74538760,74539968,74544802,74545809,74547286,74555223,74555494,74557722,74559044,74559655,74589928,74591017,74595051,74602591	Gene ID= ENSG00000006704.10 TPM= 7.59 Transcript Type= NA
chr7	74454109	74602601	74454109	74602601	+	ENST00000424337.6@GTF2IRD1	ENST00000424337.6	protein_coding	74454109,74508075,74512830,74515441,74518139,74519409,74521208,74524071,74529734,74535113,74536167,74538136,74538680,74539879,74544755,74545744,74547103,74555174,74555438,74557639,74558861,74559627,74589851,74590825,74595014,74601044,74602365	74454176,74508203,74512971,74515596,74518322,74519719,74521297,74524154,74529917,74535138,74536275,74538173,74538760,74539968,74544802,74545809,74547286,74555223,74555494,74557722,74559044,74559655,74589928,74591017,74595051,74601180,74602601	Gene ID= ENSG00000006704.10 TPM= 9.92 Transcript Type= protein_coding
chr7	74657758	74760692	74657758	74760692	+	ENST00000620879.4@GTF2I	ENST00000620879.4	protein_coding	74657758,74689124,74690973,74698961,74700247,74700606,74705164,74706390,74711032,74716894,74728786,74730229,74732479,74733923,74735461,74736500,74738045,74743449,74744758,74745883,74746337,74748015,74749025,74749268,74751361,74752090,74753094,74753846,74755509,74756820,74757959,74758780,74759548	74658068,74689227,74691111,74699095,74700430,74700634,74705218,74706433,74711109,74716950,74728896,74730294,74732662,74733981,74735532,74736683,74738103,74743520,74744941,74745941,74746411,74748116,74749090,74749451,74751416,74752170,74753177,74754029,74755537,74756861,74758000,74758855,74760692	Gene ID= ENSG00000263001.5 TPM= 42.62 Transcript Type= protein_coding
chr7	74657758	74760692	74657758	74760692	+	ENST00000614986.4@GTF2I	ENST00000614986.4	protein_coding	74657758,74689124,74690973,74698961,74700247,74700606,74705164,74706390,74711032,74716894,74718879,74728786,74730229,74732479,74733923,74735461,74736500,74738045,74743449,74744758,74745883,74746337,74748015,74749025,74749268,74751361,74752090,74753094,74753846,74755509,74756820,74757959,74758780,74759548	74658068,74689227,74691111,74699095,74700430,74700634,74705218,74706433,74711109,74716950,74718941,74728896,74730294,74732662,74733981,74735532,74736683,74738103,74743520,74744941,74745941,74746411,74748116,74749090,74749451,74751416,74752170,74753177,74754029,74755537,74756861,74758000,74758855,74760692	Gene ID= ENSG00000263001.5 TPM= 21.6 Transcript Type= protein_coding
chr7	74773962	74789313	74773962	74789313	+	ENST00000289473.8@NCF1	ENST00000289473.8	protein_coding	74773962,74777267,74779082,74779257,74780780,74782939,74783525,74785182,74787984,74788559,74789039	74774103,74777347,74779157,74779422,74780835,74783061,74783632,74785299,74788088,74788704,74789313	Gene ID= ENSG00000158517.13 TPM= 31.53 Transcript Type= protein_coding
chr7	74796146	74851561	74796146	74851561	-	transcript3024.chr7.nnic@GTF2IRD2	transcript3024.chr7.nnic	protein_coding	74851367,74836280,74832805,74824933,74822624,74822427,74819969,74819554,74812739,74810896,74809108,74806934,74804777,74803298,74801970,74796146	74851561,74836383,74832943,74825052,74822807,74822455,74820023,74819597,74812816,74810952,74809173,74807011,74804860,74803481,74802013,74798265	Gene ID= ENSG00000196275.13 TPM= 3.5 Transcript Type= NA
chr7	74818807	74851554	74818807	74851554	-	transcript3026.chr7.nnic@GTF2IRD2	transcript3026.chr7.nnic	protein_coding	74851367,74836280,74832805,74824933,74822624,74819969,74818807	74851554,74836383,74832943,74825052,74822807,74820023,74819597	Gene ID= ENSG00000196275.13 TPM= 2.34 Transcript Type= NA
chr7	74818807	74821224	74818807	74821224	-	ENST00000484624.1@GTF2IRD2	ENST00000484624.1	protein_coding	74819969,74818807	74821224,74819597	Gene ID= ENSG00000196275.13 TPM= 1.17 Transcript Type= retained_intron
chr7	74796144	74851551	74796144	74851551	-	ENST00000451013.6@GTF2IRD2	ENST00000451013.6	protein_coding	74851367,74836280,74832805,74824933,74822624,74822427,74819969,74819554,74812739,74810896,74809108,74806934,74804777,74803298,74801985,74796144	74851551,74836383,74832943,74825052,74822807,74822455,74820023,74819597,74812816,74810952,74809173,74807011,74804860,74803481,74802013,74798265	Gene ID= ENSG00000196275.13 TPM= 15.18 Transcript Type= protein_coding
chr7	74832633	74851529	74832633	74851529	-	ENST00000614386.1@GTF2IRD2	ENST00000614386.1	protein_coding	74851367,74836280,74832633	74851529,74836383,74832943	Gene ID= ENSG00000196275.13 TPM= 2.34 Transcript Type= protein_coding
chr7	74882157	74890606	74882157	74890606	-	transcript3039.chr7.nic@STAG3L2	transcript3039.chr7.nic	transcribed_unprocessed_pseudogene	74890388,74888312,74887683,74884434,74884144,74883728,74883349,74882157	74890606,74888397,74887799,74884524,74884223,74883835,74883463,74883041	Gene ID= ENSG00000277072.4 TPM= 2.92 Transcript Type= NA
chr7	74882163	74890610	74882163	74890610	-	ENST00000426587.5@STAG3L2	ENST00000426587.5	transcribed_unprocessed_pseudogene	74890388,74888312,74887683,74885023,74884434,74884144,74883728,74882163	74890610,74888397,74887799,74885146,74884524,74884223,74883835,74883463	Gene ID= ENSG00000277072.4 TPM= 11.09 Transcript Type= processed_transcript
chr7	74866272	74890606	74866272	74890606	-	transcript3041.chr7.nnic@STAG3L2	transcript3041.chr7.nnic	transcribed_unprocessed_pseudogene	74890388,74888312,74887683,74885023,74884434,74884192,74866272	74890606,74888397,74887799,74885146,74884524,74884223,74867630	Gene ID= ENSG00000277072.4 TPM= 2.34 Transcript Type= NA
chr7	75027083	75031526	75027083	75031526	+	transcript3048.chr7.nnic@NA	transcript3048.chr7.nnic	NA	75027083	75031526	Gene ID= novel_gene_chr7_3049 TPM= 38.53 Transcript Type= NA
chr7	75042183	75073793	75042183	75073793	-	ENST00000610322.4@RCC1L	ENST00000610322.4	protein_coding	75073414,75070640,75066664,75064582,75063292,75061207,75058588,75057529,75055901,75052711,75042183	75073793,75070769,75066792,75064648,75063343,75061291,75058769,75057616,75056074,75052796,75043109	Gene ID= ENSG00000274523.4 TPM= 74.73 Transcript Type= protein_coding
chr7	75092582	75149817	75092582	75149817	+	transcript3061.chr7.nnic@GTF2IRD2B	transcript3061.chr7.nnic	protein_coding	75092582,75108960,75112397,75120891,75123136,75123488,75125916,75126342,75135001,75136785,75138950,75141103,75142482,75143950,75147694	75092765,75109063,75112535,75121010,75123319,75123516,75125970,75126385,75135057,75136850,75139027,75141186,75142665,75143978,75149817	Gene ID= ENSG00000174428.16 TPM= 3.5 Transcript Type= NA
chr7	75092580	75149817	75092580	75149817	+	transcript3063.chr7.nic@GTF2IRD2B	transcript3063.chr7.nic	protein_coding	75092580,75108960,75112397,75120891,75123136,75125916,75126342,75133135,75135001,75136785,75138950,75141103,75142482,75143950,75147694	75092765,75109063,75112535,75121010,75123516,75125970,75126385,75133212,75135057,75136850,75139027,75141186,75142665,75143978,75149817	Gene ID= ENSG00000174428.16 TPM= 3.5 Transcript Type= NA
chr7	75092600	75112699	75092600	75112699	+	ENST00000614064.4@GTF2IRD2B	ENST00000614064.4	protein_coding	75092600,75108960,75112397	75092765,75109063,75112699	Gene ID= ENSG00000174428.16 TPM= 9.34 Transcript Type= protein_coding
chr7	75092581	75149817	75092581	75149817	+	ENST00000472837.5@GTF2IRD2B	ENST00000472837.5	protein_coding	75092581,75108960,75112397,75120891,75123136,75123488,75125916,75126342,75133135,75135001,75136785,75138950,75141103,75142482,75143950,75147694	75092765,75109063,75112535,75121010,75123319,75123516,75125970,75126385,75133212,75135057,75136850,75139027,75141186,75142665,75143978,75149817	Gene ID= ENSG00000174428.16 TPM= 18.68 Transcript Type= protein_coding
chr7	75156639	75171966	75156639	75171966	-	transcript3075.chr7.nnic@NCF1C	transcript3075.chr7.nnic	unprocessed_pseudogene	75171872,75171094,75168632,75166802,75166537,75165124,75162897,75162326,75160659,75157866,75157250,75156639	75171966,75171211,75168710,75166877,75166702,75165179,75163019,75162433,75160776,75157970,75157395,75156915	Gene ID= ENSG00000165178.9 TPM= 8.76 Transcript Type= NA
chr7	75156639	75172044	75156639	75172044	-	ENST00000438382.2@NCF1C	ENST00000438382.2	unprocessed_pseudogene	75171872,75168632,75166802,75166537,75165124,75162897,75162326,75160659,75157866,75157250,75156639	75172044,75168710,75166877,75166702,75165179,75163019,75162433,75160776,75157970,75157395,75156915	Gene ID= ENSG00000165178.9 TPM= 16.93 Transcript Type= unprocessed_pseudogene
chr7	75185396	75237696	75185396	75237696	-	ENST00000622829.4@GTF2IP1	ENST00000622829.4	transcribed_unprocessed_pseudogene	75237293,75217154,75215756,75213406,75212079,75210528,75209376,75207956,75202542,75201121,75200121,75199651,75197948,75196974,75196613,75194657,75193903,75192899,75192047,75190539,75189215,75188075,75187220,75185396	75237696,75217264,75215821,75213589,75212137,75210599,75209559,75208014,75202613,75201304,75200179,75199725,75198049,75197039,75196796,75194712,75193983,75192980,75192230,75190567,75189256,75188116,75187295,75186527	Gene ID= ENSG00000277053.4 TPM= 63.05 Transcript Type= processed_transcript
chr7	75410304	75416787	75410304	75416787	+	transcript3088.chr7.nic@NSUN5P1	transcript3088.chr7.nic	transcribed_unprocessed_pseudogene	75410304,75410606,75411655,75412789,75414885,75415120,75415592,75415981,75416275	75410460,75411574,75411759,75412932,75415023,75415234,75415770,75416191,75416787	Gene ID= ENSG00000223705.9 TPM= 6.62 Transcript Type= NA
chr7	75410304	75416787	75410304	75416787	+	transcript3094.chr7.nic@NSUN5P1	transcript3094.chr7.nic	transcribed_unprocessed_pseudogene	75410304,75410606,75411655,75412789,75414885,75415120,75415592,75416275	75410460,75411574,75411759,75412932,75415023,75415234,75416191,75416787	Gene ID= ENSG00000223705.9 TPM= 8.37 Transcript Type= NA
chr7	75410304	75416787	75410304	75416787	+	transcript3100.chr7.nic@NSUN5P1	transcript3100.chr7.nic	transcribed_unprocessed_pseudogene	75410304,75410606,75412789,75414885,75415120,75415592,75416275	75410460,75411759,75412932,75415023,75415234,75416191,75416787	Gene ID= ENSG00000223705.9 TPM= 6.04 Transcript Type= NA
chr7	75416787	75442652	75416787	75442652	-	transcript3110.chr7.nnic@POM121C	transcript3110.chr7.nnic	protein_coding	75442638,75421509,75419320,75416787	75442652,75422123,75419442,75418893	Gene ID= ENSG00000272391.5 TPM= 46.7 Transcript Type= NA
chr7	75507753	75528123	75507753	75528123	-	ENST00000418756.5@PMS2P3	ENST00000418756.5	transcribed_unprocessed_pseudogene	75527565,75525905,75516094,75515718,75514645,75512589,75512309,75510931,75507753	75528123,75525963,75516220,75515828,75514779,75512675,75512421,75511114,75507867	Gene ID= ENSG00000127957.17 TPM= 1.17 Transcript Type= processed_transcript
chr7	75533300	75639234	75533300	75639234	-	transcript3116.chr7.nnic@HIP1	transcript3116.chr7.nnic	protein_coding	75639051,75599184,75592372,75592056,75586753,75582075,75581237,75573761,75568199,75563188,75562935,75562073,75561329,75559732,75558167,75557654,75556710,75556026,75555416,75554440,75554113,75553453,75548891,75547755,75546939,75545088,75544695,75542851,75541919,75539323,75533300	75639234,75599247,75592514,75592112,75586833,75582151,75581298,75573901,75568256,75563263,75563075,75562170,75561401,75559915,75558255,75557770,75556811,75556169,75555551,75554526,75554220,75553589,75549001,75547813,75547032,75545188,75544800,75542974,75541980,75539431,75538224	Gene ID= ENSG00000127946.16 TPM= 5.25 Transcript Type= NA
chr7	75533300	75738947	75533300	75738947	-	ENST00000336926.10@HIP1	ENST00000336926.10	protein_coding	75738801,75599184,75592372,75592056,75586753,75582075,75581237,75573761,75568199,75563188,75562935,75562073,75561329,75559732,75558167,75557654,75556710,75556026,75555416,75554440,75554113,75553453,75548891,75547755,75546939,75545088,75544695,75542851,75541919,75539323,75533300	75738947,75599247,75592514,75592112,75586833,75582151,75581298,75573901,75568256,75563263,75563075,75562170,75561401,75559915,75558255,75557770,75556811,75556169,75555551,75554526,75554220,75553589,75549001,75547813,75547032,75545188,75544800,75542974,75541980,75539431,75538224	Gene ID= ENSG00000127946.16 TPM= 54.29 Transcript Type= protein_coding
chr7	75879013	75888926	75879013	75888926	+	transcript3137.chr7.nnic@RHBDD2	transcript3137.chr7.nnic	protein_coding	75879013,75883734,75887992	75879260,75883848,75888926	Gene ID= ENSG00000005486.16 TPM= 22.18 Transcript Type= NA
chr7	75915079	75986855	75915079	75986855	+	ENST00000461988.5@POR	ENST00000461988.5	protein_coding	75915079,75953989,75972413,75979451,75980339,75981048,75981517,75982224,75983520,75983738,75984777,75985058,75985579,75985923,75986159,75986337	75915179,75954180,75972461,75979579,75980488,75981172,75981606,75982322,75983636,75983856,75984958,75985207,75985849,75986068,75986241,75986855	Gene ID= ENSG00000127948.15 TPM= 246.36 Transcript Type= protein_coding
chr7	75954707	75963924	75954707	75963924	-	transcript3176.chr7.nnic@NA	transcript3176.chr7.nnic	NA	75962545,75959743,75956236,75954707	75963924,75960000,75958471,75954766	Gene ID= novel_gene_chr7_3177 TPM= 2.34 Transcript Type= NA
chr7	75986837	75994659	75986837	75994659	-	ENST00000493111.6@TMEM120A	ENST00000493111.6	protein_coding	75994490,75992439,75992144,75989165,75988421,75988252,75988083,75987923,75987718,75987538,75987360,75986837	75994659,75992557,75992260,75989224,75988516,75988341,75988148,75987984,75987810,75987602,75987428,75987285	Gene ID= ENSG00000189077.10 TPM= 57.21 Transcript Type= protein_coding
chr7	75986989	75994648	75986989	75994648	-	transcript3158.chr7.nic@TMEM120A	transcript3158.chr7.nic	protein_coding	75994490,75992439,75992144,75989165,75988421,75988083,75987923,75987718,75987360,75986989	75994648,75992557,75992260,75989224,75988516,75988341,75987984,75987810,75987428,75987285	Gene ID= ENSG00000189077.10 TPM= 2.34 Transcript Type= NA
chr7	75986989	75994648	75986989	75994648	-	transcript3160.chr7.nic@TMEM120A	transcript3160.chr7.nic	protein_coding	75994490,75992439,75992144,75989165,75988421,75988252,75988083,75987923,75987360,75986989	75994648,75992557,75992260,75989224,75988516,75988341,75988148,75987984,75987810,75987285	Gene ID= ENSG00000189077.10 TPM= 3.5 Transcript Type= NA
chr7	75986989	75994648	75986989	75994648	-	transcript3166.chr7.nic@TMEM120A	transcript3166.chr7.nic	protein_coding	75994490,75992439,75992144,75989165,75988421,75988252,75988083,75987923,75986989	75994648,75992557,75992260,75989224,75988516,75988341,75988148,75987984,75987810	Gene ID= ENSG00000189077.10 TPM= 2.34 Transcript Type= NA
chr7	75986989	75994648	75986989	75994648	-	transcript3170.chr7.nic@TMEM120A	transcript3170.chr7.nic	protein_coding	75994490,75992439,75992144,75989165,75988421,75987923,75987360,75986989	75994648,75992557,75992260,75989224,75988516,75988341,75987810,75987285	Gene ID= ENSG00000189077.10 TPM= 2.34 Transcript Type= NA
chr7	75987041	75994656	75987041	75994656	-	ENST00000440632.5@TMEM120A	ENST00000440632.5	protein_coding	75994490,75992439,75992144,75989165,75988421,75988083,75987923,75987718,75987538,75987360,75987041	75994656,75992557,75992260,75989224,75988516,75988341,75987984,75987810,75987602,75987428,75987285	Gene ID= ENSG00000189077.10 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr7	75996338	76048003	75996338	76048003	-	ENST00000248600.5@STYXL1	ENST00000248600.5	protein_coding	76047662,76030421,76028642,76021851,76013742,76005259,76003758,76000890,75996338	76048003,76030524,76028703,76021992,76013887,76005404,76003855,76001002,75996599	Gene ID= ENSG00000127952.16 TPM= 2.34 Transcript Type= protein_coding
chr7	75996342	76048003	75996342	76048003	-	transcript3169.chr7.nic@STYXL1	transcript3169.chr7.nic	protein_coding	76047812,76030421,76028642,76021851,76013742,76005259,76003758,76000890,75996342	76048003,76030524,76028703,76021992,76013887,76005404,76003855,76001002,75996599	Gene ID= ENSG00000127952.16 TPM= 7.01 Transcript Type= NA
chr7	76048067	76067508	76048067	76067508	+	ENST00000315758.9@MDH2	ENST00000315758.9	protein_coding	76048067,76054830,76057410,76057969,76060373,76063515,76064339,76064802,76066279	76048226,76054998,76057493,76058078,76060498,76063592,76064438,76064953,76067508	Gene ID= ENSG00000146701.11 TPM= 28.02 Transcript Type= protein_coding
chr7	76048085	76067506	76048085	76067506	+	ENST00000443006.5@MDH2	ENST00000443006.5	protein_coding	76048085,76057410,76057969,76060373,76063515,76064339,76064802,76066279	76048226,76057493,76058078,76060498,76063592,76064438,76064953,76067506	Gene ID= ENSG00000146701.11 TPM= 4.09 Transcript Type= protein_coding
chr7	76281574	76287288	76281574	76287288	+	transcript3190.chr7.nic@SRRM3	transcript3190.chr7.nic	protein_coding	76281574,76282648,76282964,76283524,76285615	76281802,76282872,76283101,76283602,76287288	Gene ID= ENSG00000177679.15 TPM= 7.01 Transcript Type= NA
chr7	76302544	76304295	76302544	76304295	+	ENST00000248553.6@HSPB1	ENST00000248553.6	protein_coding	76302544,76303802,76303984	76303076,76303865,76304295	Gene ID= ENSG00000106211.8 TPM= 617.66 Transcript Type= protein_coding
chr7	76302688	76304260	76302688	76304260	+	ENST00000447574.1@HSPB1	ENST00000447574.1	protein_coding	76302688,76303984	76303865,76304260	Gene ID= ENSG00000106211.8 TPM= 5.84 Transcript Type= nonsense_mediated_decay
chr7	76326794	76359031	76326794	76359031	-	ENST00000307630.4@YWHAG	ENST00000307630.4	protein_coding	76358722,76326794	76359031,76330233	Gene ID= ENSG00000170027.6 TPM= 37.36 Transcript Type= protein_coding
chr7	76461679	76505991	76461679	76505991	+	transcript3202.chr7.nic@DTX2	transcript3202.chr7.nic	protein_coding	76461679,76463545,76470300,76480421,76482508,76492153,76500441,76502298,76503426,76504356,76505374	76461836,76463709,76470419,76480777,76483147,76492253,76500520,76502456,76503587,76504445,76505991	Gene ID= ENSG00000091073.19 TPM= 4.67 Transcript Type= NA
chr7	76461679	76505991	76461679	76505991	+	transcript3204.chr7.nic@DTX2	transcript3204.chr7.nic	protein_coding	76461679,76463545,76480421,76482508,76492153,76500441,76502298,76503426,76504356,76505374	76461836,76463709,76480777,76483147,76492253,76500520,76502456,76503587,76504445,76505991	Gene ID= ENSG00000091073.19 TPM= 8.17 Transcript Type= NA
chr7	76461701	76505991	76461701	76505991	+	transcript3207.chr7.nic@DTX2	transcript3207.chr7.nic	protein_coding	76461701,76480421,76482508,76492153,76500441,76502298,76503426,76504356,76505374	76461836,76480777,76483147,76492253,76500520,76502456,76503587,76504445,76505991	Gene ID= ENSG00000091073.19 TPM= 5.84 Transcript Type= NA
chr7	76461701	76505991	76461701	76505991	+	ENST00000324432.9@DTX2	ENST00000324432.9	protein_coding	76461701,76463545,76470300,76480421,76482508,76492153,76497337,76500441,76502298,76503426,76504356,76505374	76461836,76463709,76470419,76480777,76483147,76492253,76497477,76500520,76502456,76503587,76504445,76505991	Gene ID= ENSG00000091073.19 TPM= 4.09 Transcript Type= protein_coding
chr7	76461727	76505991	76461727	76505991	+	ENST00000430490.6@DTX2	ENST00000430490.6	protein_coding	76461727,76463545,76480421,76482508,76492153,76497337,76500441,76502298,76503426,76504356,76505374	76461836,76463709,76480777,76483147,76492253,76497477,76500520,76502456,76503587,76504445,76505991	Gene ID= ENSG00000091073.19 TPM= 11.09 Transcript Type= protein_coding
chr7	76461716	76505994	76461716	76505994	+	ENST00000413936.6@DTX2	ENST00000413936.6	protein_coding	76461716,76480421,76482508,76492153,76497337,76500441,76502298,76503426,76504356,76505374	76461836,76480777,76483147,76492253,76497477,76500520,76502456,76503587,76504445,76505994	Gene ID= ENSG00000091073.19 TPM= 4.67 Transcript Type= protein_coding
chr7	76501890	76503526	76501890	76503526	-	transcript3232.chr7.nnic@NA	transcript3232.chr7.nnic	NA	76501890	76503526	Gene ID= novel_gene_chr7_3233 TPM= 2.34 Transcript Type= NA
chr7	76510345	76527883	76510345	76527883	+	transcript3210.chr7.nnic@UPK3B	transcript3210.chr7.nnic	protein_coding	76510345,76510903,76511657,76513084,76513947,76515045,76521938,76524517,76527766	76510737,76511052,76511882,76513163,76514076,76516497,76522077,76524700,76527883	Gene ID= ENSG00000243566.6 TPM= 2.34 Transcript Type= NA
chr7	76510428	76516521	76510428	76516521	+	ENST00000334348.7@UPK3B	ENST00000334348.7	protein_coding	76510428,76510903,76511657,76513084,76513947,76515045	76510737,76511052,76511882,76513163,76514076,76516521	Gene ID= ENSG00000243566.6 TPM= 23.35 Transcript Type= protein_coding
chr7	76549360	76627982	76549360	76627982	+	ENST00000418663.5@AC004980.1	ENST00000418663.5	transcribed_unprocessed_pseudogene	76549360,76551420,76625921	76549861,76551522,76627982	Gene ID= ENSG00000205485.13 TPM= 5.84 Transcript Type= processed_transcript
chr7	76609986	76627287	76609986	76627287	-	transcript3211.chr7.nnic@POMZP3	transcript3211.chr7.nnic	protein_coding	76626708,76626000,76625522,76618512,76618183,76611722,76611454,76609986	76627287,76626215,76625683,76618615,76618300,76611813,76611591,76610215	Gene ID= ENSG00000146707.14 TPM= 4.67 Transcript Type= NA
chr7	76609986	76627241	76609986	76627241	-	ENST00000310842.8@POMZP3	ENST00000310842.8	protein_coding	76626708,76626000,76625522,76618183,76611722,76611454,76609986	76627241,76626215,76625683,76618300,76611813,76611591,76610215	Gene ID= ENSG00000146707.14 TPM= 8.17 Transcript Type= protein_coding
chr7	76610028	76627261	76610028	76627261	-	ENST00000424818.5@POMZP3	ENST00000424818.5	protein_coding	76626708,76626000,76625522,76618497,76618183,76611722,76611454,76610028	76627261,76626215,76625683,76618615,76618300,76611813,76611591,76610215	Gene ID= ENSG00000146707.14 TPM= 4.67 Transcript Type= nonsense_mediated_decay
chr7	76959835	77025733	76959835	77025733	+	ENST00000636308.1@DTX2P1-UPK3BP1-PMS2P11	ENST00000636308.1	processed_transcript	76959835,76961657,76978528,76980621,76990269,77000309,77002163,77004218,77005550,77006979,77011880,77013912,77015672,77018909,77023594	76959949,76961821,76978876,76981260,76990369,77000388,77002321,77004307,77005775,77007059,77012019,77013998,77015855,77018997,77025733	Gene ID= ENSG00000265479.6 TPM= 4.67 Transcript Type= processed_transcript
chr7	77001755	77005905	77001755	77005905	-	transcript3242.chr7.nnic@NA	transcript3242.chr7.nnic	NA	77001755	77005905	Gene ID= novel_gene_chr7_3243 TPM= 5.84 Transcript Type= NA
chr7	77193371	77199826	77193371	77199826	-	ENST00000248598.5@FGL2	ENST00000248598.5	protein_coding	77199181,77193371	77199826,77196985	Gene ID= ENSG00000127951.6 TPM= 28.02 Transcript Type= protein_coding
chr7	77310751	77416413	77310751	77416413	-	transcript3255.chr7.nnic@GSAP	transcript3255.chr7.nnic	protein_coding	77416213,77406029,77404559,77397346,77396982,77387360,77382574,77381305,77377286,77376848,77375058,77374070,77362583,77360824,77355555,77355213,77353572,77352944,77330239,77329333,77328606,77326212,77323647,77321333,77320725,77314370,77313488,77312101,77311841,77310751	77416413,77406105,77404615,77397415,77397035,77387448,77382643,77381354,77377390,77376907,77375101,77374155,77362660,77360901,77355647,77355430,77353641,77353026,77330367,77329391,77328637,77326273,77323742,77321403,77320819,77314489,77313549,77312202,77311940,77311449	Gene ID= ENSG00000186088.15 TPM= 2.34 Transcript Type= NA
chr7	77310751	77416414	77310751	77416414	-	transcript3256.chr7.nic@GSAP	transcript3256.chr7.nic	protein_coding	77416213,77406029,77404559,77397346,77396982,77387360,77382574,77381305,77377286,77376848,77375058,77374070,77362583,77360824,77355555,77355213,77353572,77352944,77349351,77329333,77328606,77326212,77323647,77321333,77320725,77314370,77313488,77312101,77311841,77310751	77416414,77406105,77404615,77397415,77397035,77387448,77382643,77381354,77377390,77376907,77375101,77374155,77362660,77360901,77355647,77355430,77353641,77353026,77349404,77330367,77328637,77326273,77323742,77321403,77320819,77314489,77313549,77312202,77311940,77311449	Gene ID= ENSG00000186088.15 TPM= 2.34 Transcript Type= NA
chr7	77310751	77416406	77310751	77416406	-	transcript3260.chr7.nnic@GSAP	transcript3260.chr7.nnic	protein_coding	77416213,77406029,77404559,77397346,77396982,77387360,77382574,77381305,77377286,77376848,77375058,77374070,77362583,77360824,77355555,77355213,77353572,77352944,77349351,77330239,77329333,77328606,77326212,77323647,77321333,77320725,77314370,77313488,77312101,77310751	77416406,77406105,77404615,77397415,77397035,77387448,77382643,77381354,77377390,77376907,77375101,77374155,77362660,77360901,77355647,77355430,77353641,77353026,77349404,77330367,77329391,77328637,77326273,77323742,77321403,77320819,77314489,77313549,77312202,77311449	Gene ID= ENSG00000186088.15 TPM= 2.34 Transcript Type= NA
chr7	77380002	77416415	77380002	77416415	-	transcript3272.chr7.nic@GSAP	transcript3272.chr7.nic	protein_coding	77416213,77406029,77404559,77397346,77396982,77387360,77382574,77380002	77416415,77406105,77404615,77397415,77397035,77387448,77382643,77381354	Gene ID= ENSG00000186088.15 TPM= 3.5 Transcript Type= NA
chr7	77310751	77416400	77310751	77416400	-	ENST00000257626.11@GSAP	ENST00000257626.11	protein_coding	77416213,77406029,77404559,77397346,77396982,77387360,77382574,77381305,77377286,77376848,77375058,77374070,77362583,77360824,77355555,77355213,77353572,77352944,77349351,77330239,77329333,77328606,77326212,77323647,77321333,77320725,77314370,77313488,77312101,77311841,77310751	77416400,77406105,77404615,77397415,77397035,77387448,77382643,77381354,77377390,77376907,77375101,77374155,77362660,77360901,77355647,77355430,77353641,77353026,77349404,77330367,77329391,77328637,77326273,77323742,77321403,77320819,77314489,77313549,77312202,77311940,77311449	Gene ID= ENSG00000186088.15 TPM= 46.7 Transcript Type= protein_coding
chr7	77532856	77533812	77532856	77533812	-	transcript3275.chr7.nnic@NA	transcript3275.chr7.nnic	NA	77532856	77533812	Gene ID= novel_gene_chr7_3276 TPM= 2.34 Transcript Type= NA
chr7	77537204	77640071	77537204	77640071	+	transcript3284.chr7.nic@PTPN12	transcript3284.chr7.nic	protein_coding	77537204,77571078,77583555,77585543,77592185,77597842,77600664,77607235,77610765,77610948,77618480,77626705,77632348,77635782,77637018,77638624,77639219	77537645,77571186,77583650,77585581,77592256,77597901,77600806,77607301,77610842,77611046,77618565,77627675,77632425,77635849,77637048,77638731,77640071	Gene ID= ENSG00000127947.15 TPM= 2.34 Transcript Type= NA
chr7	77537275	77640071	77537275	77640071	+	ENST00000248594.10@PTPN12	ENST00000248594.10	protein_coding	77537275,77571078,77581427,77583555,77585543,77592185,77597842,77600664,77607235,77610765,77610948,77618480,77626705,77632348,77635782,77637018,77638624,77639219	77537645,77571186,77581503,77583650,77585581,77592256,77597901,77600806,77607301,77610842,77611046,77618565,77627675,77632425,77635849,77637048,77638731,77640071	Gene ID= ENSG00000127947.15 TPM= 47.87 Transcript Type= protein_coding
chr7	77543346	77546080	77543346	77546080	-	transcript3290.chr7.nnic@NA	transcript3290.chr7.nnic	NA	77543346	77546080	Gene ID= novel_gene_chr7_3291 TPM= 4.67 Transcript Type= NA
chr7	77657666	77696237	77657666	77696237	-	transcript3298.chr7.nic@APTR	transcript3298.chr7.nic	lincRNA	77695896,77685202,77661198,77657666	77696237,77685328,77661333,77659318	Gene ID= ENSG00000214293.8 TPM= 2.34 Transcript Type= NA
chr7	77696424	77749474	77696424	77749474	+	transcript3300.chr7.nic@RSBN1L	transcript3300.chr7.nic	protein_coding	77696424,77736410,77749424	77697055,77736526,77749474	Gene ID= ENSG00000187257.15 TPM= 14.01 Transcript Type= NA
chr7	77707024	77711064	77707024	77711064	-	transcript3308.chr7.nnic@NA	transcript3308.chr7.nnic	NA	77707024	77711064	Gene ID= novel_gene_chr7_3309 TPM= 3.5 Transcript Type= NA
chr7	77750298	77752768	77750298	77752768	-	transcript3310.chr7.nnic@NA	transcript3310.chr7.nnic	NA	77750298	77752768	Gene ID= novel_gene_chr7_3311 TPM= 9.34 Transcript Type= NA
chr7	77793728	77798580	77793728	77798580	-	ENST00000257663.3@TMEM60	ENST00000257663.3	protein_coding	77798254,77793728	77798580,77794423	Gene ID= ENSG00000135211.5 TPM= 30.36 Transcript Type= protein_coding
chr7	77798790	77939608	77798790	77939608	+	transcript3315.chr7.nic@PHTF2	transcript3315.chr7.nic	protein_coding	77798790,77840221,77893608,77900711,77901762,77908793,77910245,77920279,77922623,77929109,77937710	77798971,77840300,77893664,77900780,77901920,77908958,77910409,77920465,77922778,77929327,77939608	Gene ID= ENSG00000006576.16 TPM= 2.34 Transcript Type= NA
chr7	77798805	77957225	77798805	77957225	+	ENST00000307305.12@PHTF2	ENST00000307305.12	protein_coding	77798805,77840221,77893608,77900711,77901762,77908793,77910245,77920279,77922623,77929109,77937710,77940030,77940528,77942700,77949678,77951617,77953769,77954858	77798971,77840300,77893664,77900780,77901920,77908958,77910409,77920465,77922778,77929327,77937838,77940302,77940659,77942786,77949833,77951712,77953894,77957225	Gene ID= ENSG00000006576.16 TPM= 7.01 Transcript Type= protein_coding
chr7	78347142	78359458	78347142	78359458	+	ENST00000450028.5@RPL13AP17	ENST00000450028.5	transcribed_processed_pseudogene	78347142,78348377,78350127,78351754,78352855,78358276	78347326,78348425,78350281,78351957,78352973,78359458	Gene ID= ENSG00000231322.5 TPM= 1.17 Transcript Type= processed_transcript
chr7	78347148	78359458	78347148	78359458	+	transcript3323.chr7.nic@RPL13AP17	transcript3323.chr7.nic	transcribed_processed_pseudogene	78347148,78350127,78351754,78352855,78358276	78347326,78350281,78351957,78352973,78359458	Gene ID= ENSG00000231322.5 TPM= 3.5 Transcript Type= NA
chr7	79449355	79453373	79449355	79453373	-	transcript3335.chr7.nnic@NA	transcript3335.chr7.nnic	NA	79449355	79453373	Gene ID= novel_gene_chr7_3336 TPM= 2.34 Transcript Type= NA
chr7	79453960	79471208	79453960	79471208	+	ENST00000414797.5@MAGI2-AS3	ENST00000414797.5	processed_transcript	79453960,79454886,79458847,79470594,79470783	79454244,79455007,79458999,79470679,79471208	Gene ID= ENSG00000234456.7 TPM= 3.5 Transcript Type= antisense_RNA
chr7	80134788	80219402	80134788	80219402	+	ENST00000351004.7@GNAI1	ENST00000351004.7	protein_coding	80134788,80188951,80189090,80199225,80203704,80210969,80212716,80217303	80135278,80188993,80189231,80199382,80203832,80211098,80212869,80219402	Gene ID= ENSG00000127955.15 TPM= 68.89 Transcript Type= protein_coding
chr7	80602189	80679277	80602189	80679277	+	transcript3358.chr7.nic@CD36	transcript3358.chr7.nic	protein_coding	80602189,80646088,80646652,80656540,80661063,80662990,80664406,80666443,80669953,80670977,80671922,80672770,80673355,80673983,80676384	80602379,80646181,80646860,80656700,80661210,80663169,80664497,80666489,80670022,80671164,80672040,80672843,80673409,80674147,80679277	Gene ID= ENSG00000135218.17 TPM= 15.86 Transcript Type= NA
chr7	80623724	80679277	80623724	80679277	+	transcript3364.chr7.nic@CD36	transcript3364.chr7.nic	protein_coding	80623724,80646088,80646652,80656540,80661063,80662990,80664406,80666443,80669953,80670977,80671922,80672770,80673355,80673983,80676384	80624190,80646181,80646860,80656700,80661210,80663169,80664497,80666489,80670022,80671164,80672040,80672843,80673409,80674147,80679277	Gene ID= ENSG00000135218.17 TPM= 15.86 Transcript Type= NA
chr7	80602150	80674409	80602150	80674409	+	ENST00000309881.11@CD36	ENST00000309881.11	protein_coding	80602150,80646088,80646652,80656540,80661063,80662990,80664406,80666443,80669953,80670977,80671922,80672770,80673355,80673983	80602379,80646181,80646860,80656700,80661210,80663169,80664497,80666489,80670022,80671164,80672040,80672843,80673409,80674409	Gene ID= ENSG00000135218.17 TPM= 4.67 Transcript Type= protein_coding
chr7	80624081	80674416	80624081	80674416	+	transcript3377.chr7.nic@CD36	transcript3377.chr7.nic	protein_coding	80624081,80646088,80646652,80656540,80661063,80662990,80664406,80666443,80669953,80670977,80671922,80672770,80673355,80673983	80624190,80646181,80646860,80656700,80661210,80663169,80664497,80666489,80670022,80671164,80672040,80672843,80673409,80674416	Gene ID= ENSG00000135218.17 TPM= 8.17 Transcript Type= NA
chr7	80638676	80677008	80638676	80677008	+	ENST00000447544.6@CD36	ENST00000447544.6	protein_coding	80638676,80646088,80646652,80656540,80661063,80662990,80664406,80666443,80669953,80670977,80671922,80672770,80673355,80673983,80676384	80638746,80646181,80646860,80656700,80661210,80663169,80664497,80666489,80670022,80671164,80672040,80672843,80673409,80674147,80677008	Gene ID= ENSG00000135218.17 TPM= 23.35 Transcript Type= protein_coding
chr7	80638676	80674416	80638676	80674416	+	ENST00000394788.7@CD36	ENST00000394788.7	protein_coding	80638676,80646088,80646652,80656540,80661063,80662990,80664406,80666443,80669953,80670977,80671922,80672770,80673355,80673983	80638746,80646181,80646860,80656700,80661210,80663169,80664497,80666489,80670022,80671164,80672040,80672843,80673409,80674416	Gene ID= ENSG00000135218.17 TPM= 3.5 Transcript Type= protein_coding
chr7	80646329	80674416	80646329	80674416	+	ENST00000432207.5@CD36	ENST00000432207.5	protein_coding	80646329,80646652,80656540,80661063,80662990,80664406,80666443,80669953,80670977,80671922,80672770,80673355,80673983	80646359,80646860,80656700,80661210,80663169,80664497,80666489,80670022,80671164,80672040,80672843,80673409,80674416	Gene ID= ENSG00000135218.17 TPM= 1.17 Transcript Type= protein_coding
chr7	80742538	80919365	80742538	80919365	-	transcript3396.chr7.nic@SEMA3C	transcript3396.chr7.nic	protein_coding	80918828,80916679,80905829,80828585,80827425,80818299,80810611,80805639,80804106,80802665,80800757,80798092,80789306,80765155,80761616,80758331,80751269,80748898,80742538	80919365,80916819,80905916,80828745,80827487,80818418,80810701,80805758,80804248,80802779,80800826,80798236,80789528,80765243,80761657,80758488,80751336,80749028,80745307	Gene ID= ENSG00000075223.13 TPM= 3.5 Transcript Type= NA
chr7	80742538	80919122	80742538	80919122	-	transcript3397.chr7.nnic@SEMA3C	transcript3397.chr7.nnic	protein_coding	80918828,80916679,80915617,80828585,80827425,80818299,80810611,80805639,80804106,80802665,80800757,80798092,80789306,80765155,80761616,80758331,80751269,80748898,80742538	80919122,80916819,80915733,80828745,80827487,80818418,80810701,80805758,80804248,80802779,80800826,80798236,80789528,80765243,80761657,80758488,80751336,80749028,80745307	Gene ID= ENSG00000075223.13 TPM= 2.34 Transcript Type= NA
chr7	80742538	80919351	80742538	80919351	-	ENST00000265361.7@SEMA3C	ENST00000265361.7	protein_coding	80918828,80916679,80828585,80827425,80818299,80810611,80805639,80804106,80802665,80800757,80798092,80789306,80765155,80761616,80758331,80751269,80748898,80742538	80919351,80916819,80828745,80827487,80818418,80810701,80805758,80804248,80802779,80800826,80798236,80789528,80765243,80761657,80758488,80751336,80749028,80745307	Gene ID= ENSG00000075223.13 TPM= 70.06 Transcript Type= protein_coding
chr7	81699006	81770198	81699006	81770198	-	ENST00000222390.9@HGF	ENST00000222390.9	protein_coding	81769884,81762707,81758692,81757189,81752120,81745000,81743353,81729605,81725890,81720745,81717232,81711481,81710147,81707290,81706287,81705647,81705390,81699006	81770198,81762872,81758804,81757303,81752262,81745120,81743471,81729779,81726017,81720847,81717365,81711519,81710243,81707364,81706427,81705753,81705535,81702757	Gene ID= ENSG00000019991.15 TPM= 14.01 Transcript Type= protein_coding
chr7	81946444	82443818	81946444	82443818	-	transcript3407.chr7.nnic@CACNA2D1	transcript3407.chr7.nnic	protein_coding	82443365,82349568,82335135,82170550,82136635,82117044,82084769,82066455,82064304,82060428,82038077,82032797,82014401,82013461,82012154,82007679,82005765,82005423,81997179,81994868,81991185,81984635,81983314,81982567,81974455,81971777,81970675,81969881,81968887,81967596,81967169,81965594,81964207,81964056,81962440,81961894,81959720,81959275,81946444	82443818,82349649,82335251,82170609,82136676,82117173,82084900,82066524,82064354,82060527,82038235,82032901,82014479,82013510,82012243,82007756,82005839,82005497,81997235,81994939,81991246,81984711,81983334,81982627,81974552,81971864,81970737,81969984,81968973,81967663,81967207,81965665,81964359,81964108,81962495,81962023,81959829,81959357,81950508	Gene ID= ENSG00000153956.15 TPM= 4.67 Transcript Type= NA
chr7	81946444	82443798	81946444	82443798	-	ENST00000356860.7@CACNA2D1	ENST00000356860.7	protein_coding	82443365,82349568,82335135,82170550,82136635,82117044,82084769,82066455,82064304,82060428,82038077,82032797,82014401,82013461,82012154,82007679,82005765,82005423,81997179,81994868,81991185,81984635,81983314,81982567,81974455,81971777,81970675,81969881,81968887,81967596,81967169,81965594,81964207,81964056,81962440,81961894,81959720,81959275,81946444	82443798,82349649,82335251,82170609,82136676,82117173,82084900,82066524,82064354,82060527,82038235,82032901,82014479,82013510,82012243,82007756,82005839,82005497,81997250,81994939,81991246,81984711,81983334,81982627,81974552,81971864,81970737,81969984,81968973,81967663,81967207,81965665,81964359,81964108,81962495,81962023,81959829,81959357,81950508	Gene ID= ENSG00000153956.15 TPM= 5.84 Transcript Type= protein_coding
chr7	83647385	83648896	83647385	83648896	+	transcript3418.chr7.nnic@NA	transcript3418.chr7.nnic	NA	83647385	83648896	Gene ID= novel_gene_chr7_3419 TPM= 11.68 Transcript Type= NA
chr7	84995553	85186925	84995553	85186925	-	transcript3424.chr7.nic@SEMA3D	transcript3424.chr7.nic	protein_coding	85186678,85153608,85121741,85097805,85081517,85072962,85068191,85065424,85055717,85042171,85040673,85036889,85022391,85020233,85018252,85015059,85012782,85006802,84995553	85186925,85153739,85121931,85097965,85081579,85073081,85068284,85065552,85055859,85042285,85040742,85037033,85022613,85020321,85018293,85015216,85012846,85006941,84999865	Gene ID= ENSG00000153993.13 TPM= 3.5 Transcript Type= NA
chr7	86880016	87059661	86880016	87059661	-	transcript3442.chr7.nic@KIAA1324L	transcript3442.chr7.nic	protein_coding	87059325,86947727,86944899,86942018,86940010,86938808,86938126,86926736,86925528,86919220,86918442,86914723,86912941,86912072,86909812,86908447,86907670,86897506,86892922,86891724,86880016	87059661,86947922,86945046,86942104,86940115,86938960,86938214,86926916,86925656,86919310,86918544,86914860,86913204,86912245,86910001,86908543,86907771,86897632,86893100,86891889,86880530	Gene ID= ENSG00000164659.14 TPM= 6.62 Transcript Type= NA
chr7	86891195	87059720	86891195	87059720	-	transcript3444.chr7.nic@KIAA1324L	transcript3444.chr7.nic	protein_coding	87059325,86964904,86947727,86944899,86942018,86940010,86938808,86938126,86926736,86925528,86919220,86918442,86914723,86912941,86912072,86909812,86908447,86907670,86897506,86892922,86891195	87059720,86965024,86947922,86945046,86942104,86940115,86938960,86938214,86926916,86925656,86919310,86918544,86914860,86913204,86912245,86910001,86908543,86907771,86897632,86893100,86891889	Gene ID= ENSG00000164659.14 TPM= 3.5 Transcript Type= NA
chr7	86876906	87059699	86876906	87059699	-	ENST00000450689.6@KIAA1324L	ENST00000450689.6	protein_coding	87059325,86964904,86947727,86944899,86942018,86940010,86938808,86938126,86926736,86925528,86919220,86918442,86914723,86912941,86912072,86909812,86908447,86907670,86897506,86892922,86891724,86876906	87059699,86965024,86947922,86945046,86942104,86940115,86938960,86938214,86926916,86925656,86919310,86918544,86914860,86913204,86912245,86910001,86908543,86907771,86897632,86893100,86891889,86880530	Gene ID= ENSG00000164659.14 TPM= 7.01 Transcript Type= protein_coding
chr7	87151423	87152282	87151423	87152282	-	ENST00000433446.1@AC005076.1	ENST00000433446.1	antisense_RNA	87151750,87151423	87152282,87151658	Gene ID= ENSG00000224046.1 TPM= 1.17 Transcript Type= antisense_RNA
chr7	87152449	87196325	87152449	87196325	+	transcript3452.chr7.nnic@DMTF1	transcript3452.chr7.nnic	protein_coding	87152449,87154390,87159639,87163495,87164934,87166483,87170995,87173535,87174593,87179545,87181309,87182228,87184397,87185829,87188092,87190945,87193198,87193725,87194684,87195031	87152555,87154528,87159821,87163617,87165050,87166605,87171089,87173649,87174669,87179702,87181341,87182337,87184625,87185980,87188301,87191027,87193353,87194102,87194828,87196325	Gene ID= ENSG00000135164.18 TPM= 3.5 Transcript Type= NA
chr7	87152426	87196325	87152426	87196325	+	transcript3456.chr7.nic@DMTF1	transcript3456.chr7.nic	protein_coding	87152426,87163239,87163495,87164934,87166483,87170995,87173535,87174593,87179545,87181309,87182056,87184397,87185829,87188092,87190945,87193198,87193725,87194684,87195031	87152555,87163332,87163617,87165050,87166605,87171089,87173649,87174669,87179702,87181341,87182337,87184625,87185980,87188301,87191027,87193353,87194102,87194828,87196325	Gene ID= ENSG00000135164.18 TPM= 2.92 Transcript Type= NA
chr7	87152412	87196325	87152412	87196325	+	ENST00000579677.5@DMTF1	ENST00000579677.5	protein_coding	87152412,87163495,87164934,87166483,87170995,87173535,87174593,87179545,87181309,87182056,87184397,87185829,87188092,87190945,87193198,87193725,87194684,87195031	87152555,87163617,87165050,87166605,87171089,87173649,87174669,87179702,87181341,87182337,87184625,87185980,87188301,87191027,87193353,87194102,87194828,87196325	Gene ID= ENSG00000135164.18 TPM= 4.09 Transcript Type= nonsense_mediated_decay
chr7	87152361	87196332	87152361	87196332	+	ENST00000331242.11@DMTF1	ENST00000331242.11	protein_coding	87152361,87163495,87164934,87166483,87170995,87173535,87174593,87179545,87181309,87182228,87184397,87185829,87188092,87190945,87193198,87193725,87194684,87195031	87152555,87163617,87165050,87166605,87171089,87173649,87174669,87179702,87181341,87182337,87184625,87185980,87188301,87191027,87193353,87194102,87194828,87196332	Gene ID= ENSG00000135164.18 TPM= 12.84 Transcript Type= protein_coding
chr7	87196160	87220556	87196160	87220556	-	transcript3469.chr7.nic@TMEM243	transcript3469.chr7.nic	protein_coding	87220217,87219426,87199007,87197941,87196160	87220556,87219718,87199057,87198045,87196758	Gene ID= ENSG00000135185.11 TPM= 11.33 Transcript Type= NA
chr7	87196160	87220587	87196160	87220587	-	transcript3472.chr7.nnic@TMEM243	transcript3472.chr7.nnic	protein_coding	87220524,87219426,87199007,87197941,87196160	87220587,87219718,87199057,87198045,87196758	Gene ID= ENSG00000135185.11 TPM= 6.66 Transcript Type= NA
chr7	87196160	87220544	87196160	87220544	-	transcript3474.chr7.nnic@TMEM243	transcript3474.chr7.nnic	protein_coding	87220361,87199007,87197941,87196160	87220544,87199057,87198045,87196758	Gene ID= ENSG00000135185.11 TPM= 4.9 Transcript Type= NA
chr7	87196162	87220587	87196162	87220587	-	ENST00000433078.5@TMEM243	ENST00000433078.5	protein_coding	87220361,87219426,87199007,87197941,87196162	87220587,87219718,87199057,87198045,87196758	Gene ID= ENSG00000135185.11 TPM= 95.39 Transcript Type= protein_coding
chr7	87196160	87219733	87196160	87219733	-	ENST00000257637.7@TMEM243	ENST00000257637.7	protein_coding	87219426,87199007,87197941,87196160	87219733,87199057,87198045,87196758	Gene ID= ENSG00000135185.11 TPM= 12.49 Transcript Type= protein_coding
chr7	87214797	87218929	87214797	87218929	+	transcript3477.chr7.nnic@NA	transcript3477.chr7.nnic	NA	87214797	87218929	Gene ID= novel_gene_chr7_3478 TPM= 3.5 Transcript Type= NA
chr7	87218592	87220557	87218592	87220557	-	transcript3479.chr7.nnic@NA	transcript3479.chr7.nnic	NA	87218592	87220557	Gene ID= novel_gene_chr7_3480 TPM= 11.68 Transcript Type= NA
chr7	87325299	87345515	87325299	87345515	-	ENST00000416560.5@TP53TG1	ENST00000416560.5	lincRNA	87345305,87345043,87341523,87325299	87345515,87345233,87341684,87325444	Gene ID= ENSG00000182165.17 TPM= 1.17 Transcript Type= lincRNA
chr7	87325350	87345486	87325350	87345486	-	ENST00000421293.1@TP53TG1	ENST00000421293.1	lincRNA	87345305,87341523,87325350	87345486,87341684,87325444	Gene ID= ENSG00000182165.17 TPM= 3.5 Transcript Type= lincRNA
chr7	87345695	87399795	87345695	87399795	+	ENST00000331536.7@CROT	ENST00000331536.7	protein_coding	87345695,87346340,87349048,87359206,87361390,87361728,87369376,87375632,87375828,87377349,87381910,87382074,87382413,87391589,87392566,87392730,87392948,87398524	87345767,87346430,87349183,87359330,87361571,87361852,87369484,87375725,87375953,87377450,87381993,87382181,87382543,87391712,87392644,87392823,87393067,87399795	Gene ID= ENSG00000005469.11 TPM= 15.18 Transcript Type= protein_coding
chr7	87503863	87713323	87503863	87713323	-	ENST00000543898.5@ABCB1	ENST00000543898.5	protein_coding	87713161,87600755,87600117,87595766,87585512,87570172,87566070,87561263,87553761,87550725,87550468,87550171,87549851,87549348,87545863,87544823,87544129,87541357,87539268,87536458,87531294,87520776,87519326,87516509,87515231,87509275,87505897,87503863	87713323,87601078,87600190,87595814,87585680,87570223,87566241,87561387,87553932,87550838,87550578,87550296,87550054,87549518,87546024,87544999,87544275,87541464,87539345,87536541,87531497,87520876,87519466,87516665,87515428,87509481,87506043,87504449	Gene ID= ENSG00000085563.14 TPM= 4.67 Transcript Type= protein_coding
chr7	87628413	87832296	87628413	87832296	+	ENST00000338056.7@RUNDC3B	ENST00000338056.7	protein_coding	87628413,87650822,87693908,87700421,87710570,87739791,87741499,87770581,87777798,87807373,87816141,87829885	87628945,87650937,87693958,87700554,87710655,87739880,87741579,87770749,87777955,87807519,87816262,87832296	Gene ID= ENSG00000105784.15 TPM= 1.17 Transcript Type= protein_coding
chr7	87834502	87876360	87834502	87876360	-	transcript3500.chr7.nnic@SLC25A40	transcript3500.chr7.nnic	protein_coding	87876096,87860572,87859155,87858631,87856292,87854204,87849881,87847853,87846949,87843754,87841633,87836730,87834502	87876360,87860640,87859288,87858751,87856351,87854310,87849948,87847977,87847122,87843863,87841714,87836810,87836361	Gene ID= ENSG00000075303.12 TPM= 2.34 Transcript Type= NA
chr7	87834502	87876307	87834502	87876307	-	transcript3501.chr7.nic@SLC25A40	transcript3501.chr7.nic	protein_coding	87876096,87860572,87860072,87858631,87856292,87854204,87849881,87847853,87846949,87843754,87841633,87836730,87834502	87876307,87860640,87860169,87858751,87856351,87854310,87849948,87847977,87847122,87843863,87841714,87836810,87836361	Gene ID= ENSG00000075303.12 TPM= 4.67 Transcript Type= NA
chr7	87834795	87876180	87834795	87876180	-	transcript3515.chr7.nic@SLC25A40	transcript3515.chr7.nic	protein_coding	87876096,87860572,87858631,87856292,87854204,87849881,87847853,87846949,87841633,87836730,87834795	87876180,87860640,87858751,87856351,87854310,87849948,87847977,87847122,87843863,87836810,87836361	Gene ID= ENSG00000075303.12 TPM= 2.34 Transcript Type= NA
chr7	87833568	87876349	87833568	87876349	-	ENST00000341119.9@SLC25A40	ENST00000341119.9	protein_coding	87876096,87860572,87858631,87856292,87854204,87849881,87847853,87846949,87843754,87841633,87836730,87833568	87876349,87860640,87858751,87856351,87854310,87849948,87847977,87847122,87843863,87841714,87836810,87836361	Gene ID= ENSG00000075303.12 TPM= 4.67 Transcript Type= protein_coding
chr7	87876534	87908373	87876534	87908373	+	ENST00000431138.5@DBF4	ENST00000431138.5	protein_coding	87876534,87878053,87884979,87886844,87887329,87887983,87896474,87897294,87900221,87900764,87904292,87907188	87876778,87878133,87885158,87886894,87887398,87888059,87896510,87897339,87900349,87900878,87904416,87908373	Gene ID= ENSG00000006634.7 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr7	88205118	88220079	88205118	88220079	-	ENST00000265729.6@SRI	ENST00000265729.6	protein_coding	88219976,88218859,88217122,88210882,88209983,88209339,88208507,88205118	88220079,88218942,88217191,88210925,88210130,88209452,88208565,88206504	Gene ID= ENSG00000075142.13 TPM= 52.54 Transcript Type= protein_coding
chr7	88276429	88306933	88276429	88306933	-	transcript3525.chr7.nic@STEAP4	transcript3525.chr7.nic	protein_coding	88306792,88290916,88283814,88282641,88280915,88276429	88306933,88291014,88284271,88283168,88281079,88279628	Gene ID= ENSG00000127954.12 TPM= 28.02 Transcript Type= NA
chr7	88270892	88306891	88270892	88306891	-	ENST00000380079.8@STEAP4	ENST00000380079.8	protein_coding	88306792,88283814,88282641,88280915,88270892	88306891,88284271,88283168,88281079,88279628	Gene ID= ENSG00000127954.12 TPM= 5.84 Transcript Type= protein_coding
chr7	90154375	90164827	90154375	90164827	+	ENST00000297205.6@STEAP1	ENST00000297205.6	protein_coding	90154375,90159758,90160805,90161914,90164477	90154543,90159872,90161317,90162078,90164827	Gene ID= ENSG00000164647.8 TPM= 5.84 Transcript Type= protein_coding
chr7	90211686	90237678	90211686	90237678	+	ENST00000394621.6@STEAP2	ENST00000394621.6	protein_coding	90211686,90216491,90225050,90226971,90229872,90232337	90212045,90216603,90225574,90227498,90230036,90237678	Gene ID= ENSG00000157214.13 TPM= 14.01 Transcript Type= protein_coding
chr7	90346676	90391455	90346676	90391455	+	ENST00000222511.10@GTPBP10	ENST00000222511.10	protein_coding	90346676,90352816,90354458,90355086,90372155,90374302,90377507,90378134,90382956,90384892	90346774,90353009,90354549,90355230,90372228,90374354,90377614,90378211,90383079,90391455	Gene ID= ENSG00000105793.15 TPM= 3.5 Transcript Type= protein_coding
chr7	90346665	90385890	90346665	90385890	+	ENST00000257659.12@GTPBP10	ENST00000257659.12	protein_coding	90346665,90352816,90372155,90374302,90377507,90378134,90382956,90384892	90346774,90353009,90372228,90374354,90377614,90378211,90383079,90385890	Gene ID= ENSG00000105793.15 TPM= 1.17 Transcript Type= protein_coding
chr7	90403386	90415954	90403386	90415954	+	ENST00000287916.8@CLDN12	ENST00000287916.8	protein_coding	90403386,90405519,90412644	90403549,90405608,90415954	Gene ID= ENSG00000157224.15 TPM= 30.36 Transcript Type= protein_coding
chr7	90403467	90415954	90403467	90415954	+	ENST00000394605.2@CLDN12	ENST00000394605.2	protein_coding	90403467,90405519,90412644	90403549,90405612,90415954	Gene ID= ENSG00000157224.15 TPM= 7.01 Transcript Type= protein_coding
chr7	90590623	90595890	90590623	90595890	-	ENST00000441971.5@AC002456.1	ENST00000441971.5	antisense_RNA	90595733,90591716,90590623	90595890,90591901,90590728	Gene ID= ENSG00000223969.5 TPM= 1.17 Transcript Type= antisense_RNA
chr7	91264364	91271326	91264364	91271326	+	ENST00000287934.3@FZD1	ENST00000287934.3	protein_coding	91264364	91271326	Gene ID= ENSG00000157240.3 TPM= 16.35 Transcript Type= protein_coding
chr7	91872891	91880720	91872891	91880720	-	ENST00000351870.7@MTERF1	ENST00000351870.7	protein_coding	91880657,91880055,91872891	91880720,91880113,91874764	Gene ID= ENSG00000127989.13 TPM= 9.34 Transcript Type= protein_coding
chr7	92091989	92110668	92091989	92110668	+	ENST00000487258.5@AKAP9	ENST00000487258.5	protein_coding	92091989,92095023,92096689,92097586,92098109,92099687,92100856,92102594,92105678,92107293,92108494,92110122	92093316,92095173,92097357,92097794,92098214,92099869,92101056,92102826,92105763,92107422,92108633,92110668	Gene ID= ENSG00000127914.16 TPM= 2.34 Transcript Type= retained_intron
chr7	91940858	92002095	91940858	92002095	+	transcript3585.chr7.nic@AKAP9	transcript3585.chr7.nic	protein_coding	91940858,91973711,91980289,91992158,91992885,91994621,91995603,92000848	91941147,91973968,91980333,91992211,91993055,91994776,91995800,92002095	Gene ID= ENSG00000127914.16 TPM= 7.01 Transcript Type= NA
chr7	92112151	92134530	92112151	92134530	-	ENST00000003100.12@CYP51A1	ENST00000003100.12	protein_coding	92134173,92131774,92128880,92127505,92126253,92123734,92123120,92118520,92117044,92112151	92134530,92131872,92129056,92127631,92126427,92123853,92123315,92118615,92117212,92113843	Gene ID= ENSG00000001630.15 TPM= 493.31 Transcript Type= protein_coding
chr7	92199413	92246100	92199413	92246100	-	ENST00000340022.6@KRIT1	ENST00000340022.6	protein_coding	92245465,92244902,92244002,92242034,92240993,92237667,92236413,92235403,92234808,92234449,92226526,92225720,92222822,92221902,92214611,92213892,92213195,92201307,92199413	92246100,92245134,92244149,92242137,92241152,92237759,92236542,92235646,92234923,92234592,92226682,92225827,92222978,92222053,92214777,92213979,92213401,92201423,92200804	Gene ID= ENSG00000001631.15 TPM= 1.17 Transcript Type= protein_coding
chr7	92200014	92245938	92200014	92245938	-	transcript3591.chr7.nic@KRIT1	transcript3591.chr7.nic	protein_coding	92245906,92244902,92244002,92242034,92240993,92237667,92236413,92235403,92234808,92234449,92226526,92225720,92222822,92221902,92214611,92213892,92213195,92201307,92200014	92245938,92245171,92244149,92242137,92241152,92237759,92236542,92235646,92234923,92234592,92226682,92225827,92222978,92222053,92214777,92213979,92213401,92201423,92200804	Gene ID= ENSG00000001631.15 TPM= 3.5 Transcript Type= NA
chr7	92200014	92245778	92200014	92245778	-	transcript3595.chr7.nnic@KRIT1	transcript3595.chr7.nnic	protein_coding	92245427,92244002,92242034,92240993,92237667,92236413,92235403,92234808,92234449,92226526,92225720,92222822,92221902,92214611,92213892,92213195,92201307,92200014	92245778,92244149,92242137,92241152,92237759,92236542,92235646,92234923,92234592,92226682,92225827,92222978,92222053,92214777,92213979,92213401,92201423,92200804	Gene ID= ENSG00000001631.15 TPM= 2.34 Transcript Type= NA
chr7	92200014	92245934	92200014	92245934	-	transcript3598.chr7.nic@KRIT1	transcript3598.chr7.nic	protein_coding	92245906,92245427,92242034,92240993,92237667,92236413,92235403,92234808,92234449,92226526,92225720,92222822,92221902,92214611,92213892,92213195,92201307,92200014	92245934,92245595,92242137,92241152,92237759,92236542,92235646,92234923,92234592,92226682,92225827,92222978,92222053,92214777,92213979,92213401,92201423,92200804	Gene ID= ENSG00000001631.15 TPM= 2.34 Transcript Type= NA
chr7	92245960	92399348	92245960	92399348	+	transcript3612.chr7.nnic@ANKIB1	transcript3612.chr7.nnic	protein_coding	92245960,92246214,92294889,92307359,92319330,92327783,92343024,92344978,92350950,92352476,92362185,92371477,92386509,92387798,92387975,92389971,92391166,92392241,92396365,92397723,92398212	92246104,92246519,92295166,92307656,92319512,92327900,92343232,92345066,92351094,92352642,92362273,92371607,92386643,92387884,92388041,92390116,92391344,92392292,92396476,92397859,92399348	Gene ID= ENSG00000001629.9 TPM= 4.67 Transcript Type= NA
chr7	92246234	92401384	92246234	92401384	+	ENST00000265742.7@ANKIB1	ENST00000265742.7	protein_coding	92246234,92294889,92307359,92319330,92327783,92343024,92344978,92350950,92352476,92362185,92371477,92386509,92387798,92387975,92389971,92391166,92392241,92396365,92397723,92398212	92246519,92295166,92307656,92319512,92327900,92343232,92345066,92351094,92352642,92362273,92371607,92386643,92387884,92388041,92390116,92391344,92392292,92396476,92397859,92401384	Gene ID= ENSG00000001629.9 TPM= 14.01 Transcript Type= protein_coding
chr7	92447453	92458836	92447453	92458836	+	ENST00000287957.3@GATAD1	ENST00000287957.3	protein_coding	92447453,92448752,92450701,92454502,92456372	92447978,92448877,92450760,92454685,92458836	Gene ID= ENSG00000157259.6 TPM= 28.02 Transcript Type= protein_coding
chr7	92487020	92528531	92487020	92528531	-	ENST00000248633.8@PEX1	ENST00000248633.8	protein_coding	92528307,92522102,92518995,92518141,92517276,92513848,92511580,92510944,92509329,92506994,92506248,92504732,92503041,92501890,92501507,92499704,92496713,92494487,92494293,92492953,92491272,92489714,92489293,92487020	92528531,92522245,92519078,92518255,92518042,92513967,92511703,92511047,92509411,92507126,92506344,92504902,92503195,92502079,92501673,92499838,92496777,92494629,92494396,92493129,92491502,92489911,92489423,92487541	Gene ID= ENSG00000127980.15 TPM= 21.02 Transcript Type= protein_coding
chr7	92487026	92528534	92487026	92528534	-	transcript3628.chr7.nic@PEX1	transcript3628.chr7.nic	protein_coding	92528307,92522102,92518995,92518141,92517276,92513848,92511580,92510944,92506248,92504732,92503041,92501890,92501507,92499704,92496713,92494487,92494293,92492953,92491272,92489714,92489293,92487026	92528534,92522245,92519078,92518255,92518042,92513967,92511703,92511047,92507126,92504902,92503195,92502079,92501673,92499838,92496777,92494629,92494396,92493129,92491502,92489911,92489423,92487541	Gene ID= ENSG00000127980.15 TPM= 2.34 Transcript Type= NA
chr7	92528773	92537534	92528773	92537534	+	ENST00000265732.9@RBM48	ENST00000265732.9	protein_coding	92528773,92529476,92532404,92534402,92536851	92528924,92529666,92532549,92534970,92537534	Gene ID= ENSG00000127993.15 TPM= 21.02 Transcript Type= protein_coding
chr7	92560793	92590393	92560793	92590393	-	ENST00000438306.5@FAM133B	ENST00000438306.5	protein_coding	92590268,92585298,92581506,92579317,92578319,92578150,92577655,92577103,92575771,92569823,92566014,92560793	92590393,92585396,92581603,92579395,92578393,92578182,92577717,92577195,92575821,92569915,92566061,92562368	Gene ID= ENSG00000234545.7 TPM= 1.17 Transcript Type= protein_coding
chr7	92561103	92590394	92561103	92590394	-	ENST00000445716.5@FAM133B	ENST00000445716.5	protein_coding	92590268,92581506,92579317,92578319,92578150,92577655,92577103,92575771,92569823,92566014,92561103	92590394,92581603,92579395,92578393,92578182,92577717,92577195,92575821,92569915,92566061,92562368	Gene ID= ENSG00000234545.7 TPM= 9.34 Transcript Type= protein_coding
chr7	92565150	92590393	92565150	92590393	-	transcript3659.chr7.nic@FAM133B	transcript3659.chr7.nic	protein_coding	92590268,92581506,92579317,92578319,92577655,92577103,92575771,92569823,92565150	92590393,92581603,92579395,92578393,92578182,92577195,92575821,92569915,92566061	Gene ID= ENSG00000234545.7 TPM= 2.34 Transcript Type= NA
chr7	92606639	92609161	92606639	92609161	-	transcript3671.chr7.nnic@NA	transcript3671.chr7.nnic	NA	92606639	92609161	Gene ID= novel_gene_chr7_3672 TPM= 5.84 Transcript Type= NA
chr7	93099516	93118023	93099516	93118023	-	ENST00000379958.2@SAMD9	ENST00000379958.2	protein_coding	93117863,93114795,93099516	93118023,93114895,93106105	Gene ID= ENSG00000205413.7 TPM= 14.01 Transcript Type= protein_coding
chr7	93130055	93148368	93130055	93148368	-	ENST00000318238.8@SAMD9L	ENST00000318238.8	protein_coding	93148194,93146883,93145385,93144732,93130055	93148368,93147146,93146040,93144833,93135991	Gene ID= ENSG00000177409.11 TPM= 5.84 Transcript Type= protein_coding
chr7	93232340	93361121	93232340	93361121	+	ENST00000544910.5@VPS50	ENST00000544910.5	protein_coding	93232340,93239866,93246102,93252653,93253860,93256509,93257394,93258159,93258357,93259550,93271220,93272635,93276165,93291703,93294545,93296742,93297145,93303460,93305828,93308824,93311166,93323611,93334117,93341427,93348711,93349875,93353640,93355891,93358317	93232500,93239934,93246129,93252775,93253931,93256562,93257464,93258276,93258392,93259632,93271262,93272733,93276305,93291835,93294636,93296836,93297243,93303550,93306004,93308942,93311272,93323732,93334197,93341575,93348807,93350033,93353761,93356080,93361121	Gene ID= ENSG00000004766.15 TPM= 1.17 Transcript Type= protein_coding
chr7	93232340	93359026	93232340	93359026	+	ENST00000305866.9@VPS50	ENST00000305866.9	protein_coding	93232340,93239866,93252653,93253860,93256509,93257394,93258159,93258357,93259550,93271220,93272635,93276165,93291703,93294545,93296742,93297145,93303460,93305828,93308824,93311166,93323611,93334117,93341427,93348711,93349875,93353640,93355891,93358317	93232500,93239934,93252775,93253931,93256562,93257464,93258276,93258392,93259632,93271262,93272733,93276305,93291835,93294636,93296836,93297243,93303550,93306004,93308942,93311272,93323732,93334197,93341575,93348807,93350033,93353761,93356080,93359026	Gene ID= ENSG00000004766.15 TPM= 21.02 Transcript Type= protein_coding
chr7	93885397	93890991	93885397	93890991	-	ENST00000222543.9@TFPI2	ENST00000222543.9	protein_coding	93890591,93890137,93889035,93887261,93885397	93890991,93890319,93889223,93887431,93886896	Gene ID= ENSG00000105825.11 TPM= 1.17 Transcript Type= protein_coding
chr7	93921699	93928610	93921699	93928610	+	ENST00000248564.5@GNG11	ENST00000248564.5	protein_coding	93921699,93926091	93922233,93928610	Gene ID= ENSG00000127920.5 TPM= 117.93 Transcript Type= protein_coding
chr7	93993242	94004375	93993242	94004375	-	ENST00000222547.7@BET1	ENST00000222547.7	protein_coding	94004198,93999170,93996265,93993242	94004375,93999294,93996321,93994385	Gene ID= ENSG00000105829.11 TPM= 9.34 Transcript Type= protein_coding
chr7	94274292	94396571	94274292	94396571	-	transcript3749.chr7.nnic@NA	transcript3749.chr7.nnic	NA	94396545,94395540,94391405,94307559,94279329,94274292	94396571,94395766,94391533,94307649,94279390,94278986	Gene ID= novel_gene_chr7_3750 TPM= 2.34 Transcript Type= NA
chr7	94394561	94431232	94394561	94431232	+	ENST00000297268.10@COL1A2	ENST00000297268.10	protein_coding	94394561,94397748,94398382,94399049,94400196,94401567,94404556,94404693,94404839,94405199,94405673,94406250,94407847,94408183,94408336,94408770,94409322,94409564,94409723,94410242,94410420,94410889,94411056,94412068,94412584,94413083,94413690,94413894,94414222,94415226,94416405,94417724,94418499,94419498,94420233,94420391,94420541,94421009,94421899,94422957,94424336,94425117,94425610,94425750,94425998,94426423,94427008,94427188,94427627,94428293,94429188,94430247	94395101,94397758,94398396,94399084,94400288,94401620,94404600,94404746,94404892,94405252,94405726,94406303,94407891,94408236,94408380,94408823,94409420,94409608,94409821,94410295,94410527,94410942,94411154,94412121,94412682,94413136,94413743,94413947,94414275,94415270,94416503,94417831,94418552,94419551,94420286,94420444,94420648,94421062,94421952,94423118,94424443,94425224,94425663,94425857,94426051,94426530,94427061,94427295,94427885,94428477,94429430,94431232	Gene ID= ENSG00000164692.17 TPM= 259.79 Transcript Type= protein_coding
chr7	94394914	94430703	94394914	94430703	+	ENST00000620463.1@COL1A2	ENST00000620463.1	protein_coding	94394914,94398374,94398382,94399049,94400196,94401567,94404556,94404693,94404839,94405199,94405673,94406250,94407847,94408183,94408336,94408770,94409322,94409564,94409723,94410242,94410420,94410889,94411056,94412068,94412584,94413083,94413690,94413894,94414222,94415226,94416405,94417724,94418499,94419498,94420233,94420391,94420541,94421009,94421899,94422957,94424336,94425117,94425610,94425750,94425998,94426423,94427008,94427188,94427627,94428293,94429188,94430247	94395101,94398378,94398396,94399084,94400288,94401620,94404600,94404746,94404892,94405252,94405726,94406303,94407891,94408236,94408380,94408823,94409420,94409608,94409821,94410295,94410527,94410942,94411154,94412121,94412682,94413136,94413743,94413947,94414275,94415270,94416503,94417831,94418552,94419551,94420286,94420444,94420648,94421062,94421952,94423118,94424443,94425224,94425663,94425857,94426051,94426530,94427061,94427295,94427885,94428477,94429430,94430703	Gene ID= ENSG00000164692.17 TPM= 244.03 Transcript Type= protein_coding
chr7	94509813	94537692	94509813	94537692	+	transcript3764.chr7.nic@CASD1	transcript3764.chr7.nic	protein_coding	94509813,94517560,94518203,94527162,94528188,94533205,94533679,94535309,94537472	94510217,94517656,94518323,94527206,94528250,94533249,94533802,94535523,94537692	Gene ID= ENSG00000127995.16 TPM= 3.5 Transcript Type= NA
chr7	94509840	94528897	94509840	94528897	+	transcript3767.chr7.nic@CASD1	transcript3767.chr7.nic	protein_coding	94509840,94517560,94518203,94527162,94528188	94510217,94517656,94518323,94527206,94528897	Gene ID= ENSG00000127995.16 TPM= 3.5 Transcript Type= NA
chr7	94509798	94557019	94509798	94557019	+	ENST00000297273.8@CASD1	ENST00000297273.8	protein_coding	94509798,94517560,94518203,94527162,94528188,94533205,94533679,94535309,94537472,94538967,94544411,94545545,94547096,94549533,94551338,94552350,94554483,94555492	94510217,94517656,94518323,94527206,94528250,94533249,94533802,94535523,94537894,94539056,94544530,94545701,94547175,94549634,94551478,94552427,94554575,94557019	Gene ID= ENSG00000127995.16 TPM= 17.51 Transcript Type= protein_coding
chr7	94585230	94656206	94585230	94656206	-	transcript3771.chr7.nnic@SGCE	transcript3771.chr7.nnic	protein_coding	94655990,94629719,94628202,94623325,94622546,94618758,94603290,94600646,94599697,94598775,94588689,94585230	94656206,94629841,94628359,94623397,94622626,94618956,94603452,94600857,94599723,94598963,94588732,94585515	Gene ID= ENSG00000127990.15 TPM= 8.08 Transcript Type= NA
chr7	94585230	94656161	94585230	94656161	-	transcript3772.chr7.nic@SGCE	transcript3772.chr7.nic	protein_coding	94655990,94639341,94629719,94628202,94623325,94618758,94603290,94600646,94599697,94598775,94588689,94585230	94656161,94639448,94629841,94628359,94623397,94618956,94603452,94600857,94599723,94598963,94588732,94585515	Gene ID= ENSG00000127990.15 TPM= 6.91 Transcript Type= NA
chr7	94585230	94656209	94585230	94656209	-	ENST00000265735.11@SGCE	ENST00000265735.11	protein_coding	94655990,94629719,94628202,94623325,94618758,94603290,94600646,94599697,94598775,94588689,94585230	94656209,94629841,94628359,94623397,94618956,94603452,94600857,94599723,94598963,94588732,94585515	Gene ID= ENSG00000127990.15 TPM= 55.95 Transcript Type= protein_coding
chr7	94585226	94656206	94585226	94656206	-	transcript3777.chr7.nnic@SGCE	transcript3777.chr7.nnic	protein_coding	94655990,94629719,94628202,94623325,94618758,94603290,94600646,94599697,94598775,94585226	94656206,94629841,94628359,94623397,94618956,94603452,94600857,94599723,94598963,94585515	Gene ID= ENSG00000127990.15 TPM= 4.96 Transcript Type= NA
chr7	94585248	94656124	94585248	94656124	-	ENST00000445866.6@SGCE	ENST00000445866.6	protein_coding	94655990,94629719,94628202,94623325,94618758,94603290,94600646,94599697,94598775,94597930,94588689,94585248	94656124,94629841,94628359,94623397,94618956,94603452,94600857,94599723,94598963,94598004,94588732,94585515	Gene ID= ENSG00000127990.15 TPM= 4.09 Transcript Type= protein_coding
chr7	94585250	94656166	94585250	94656166	-	ENST00000437425.6@SGCE	ENST00000437425.6	protein_coding	94655990,94628202,94623325,94618758,94603290,94600646,94599697,94598775,94588689,94585250	94656166,94628359,94623397,94618956,94603452,94600857,94599723,94598963,94588732,94585515	Gene ID= ENSG00000127990.15 TPM= 1.75 Transcript Type= protein_coding
chr7	94656325	94669695	94656325	94669695	+	ENST00000482108.1@PEG10	ENST00000482108.1	protein_coding	94656325,94663334	94656580,94669695	Gene ID= ENSG00000242265.5 TPM= 49.04 Transcript Type= protein_coding
chr7	94907637	95296413	94907637	95296413	+	ENST00000340694.8@PPP1R9A	ENST00000340694.8	protein_coding	94907637,94909898,95111259,95120712,95161867,95198349,95225961,95247473,95250026,95251762,95251959,95268550,95286206,95287110,95288536,95290091	94907702,94911508,95111391,95120832,95161971,95198484,95226116,95247526,95250255,95251858,95252130,95268707,95286325,95287133,95288718,95296413	Gene ID= ENSG00000158528.11 TPM= 8.17 Transcript Type= protein_coding
chr7	95359872	95396483	95359872	95396483	-	transcript3790.chr7.nic@PON3	transcript3790.chr7.nic	protein_coding	95396277,95394644,95390154,95377533,95372173,95367362,95363863,95362760,95362362,95359872	95396483,95394714,95390209,95377676,95372338,95367488,95364063,95362841,95362490,95360131	Gene ID= ENSG00000105852.10 TPM= 10.51 Transcript Type= NA
chr7	95359946	95396363	95359946	95396363	-	ENST00000451904.5@PON3	ENST00000451904.5	protein_coding	95396277,95394644,95390154,95372173,95367362,95363863,95362760,95362362,95359946	95396363,95394714,95390209,95372338,95367488,95364063,95362841,95362438,95360131	Gene ID= ENSG00000105852.10 TPM= 1.17 Transcript Type= protein_coding
chr7	95359944	95396361	95359944	95396361	-	ENST00000265627.9@PON3	ENST00000265627.9	protein_coding	95396277,95394644,95390154,95372173,95367362,95363863,95362760,95362362,95359944	95396361,95394714,95390209,95372338,95367488,95364063,95362841,95362490,95360131	Gene ID= ENSG00000105852.10 TPM= 3.5 Transcript Type= protein_coding
chr7	95404863	95435050	95404863	95435050	-	transcript3806.chr7.nnic@PON2	transcript3806.chr7.nnic	protein_coding	95434878,95424515,95416242,95412312,95411653,95409901,95406987,95406119,95404863	95435050,95424585,95416297,95412451,95411779,95410101,95407068,95406247,95405488	Gene ID= ENSG00000105854.12 TPM= 9.92 Transcript Type= NA
chr7	95404863	95435008	95404863	95435008	-	transcript3807.chr7.nic@PON2	transcript3807.chr7.nic	protein_coding	95434878,95424515,95416172,95412312,95411653,95409901,95406987,95406119,95404863	95435008,95424585,95416297,95412477,95411779,95410101,95407068,95406247,95405488	Gene ID= ENSG00000105854.12 TPM= 6.42 Transcript Type= NA
chr7	95407190	95434999	95407190	95434999	-	transcript3812.chr7.nic@PON2	transcript3812.chr7.nic	protein_coding	95434878,95424515,95416242,95412312,95411653,95407190	95434999,95424585,95416297,95412477,95411779,95410101	Gene ID= ENSG00000105854.12 TPM= 5.84 Transcript Type= NA
chr7	95404897	95435329	95404897	95435329	-	ENST00000633192.1@PON2	ENST00000633192.1	protein_coding	95434878,95424515,95416242,95412312,95411653,95409901,95406987,95406119,95404897	95435329,95424585,95416297,95412477,95411779,95410101,95407068,95406247,95405488	Gene ID= ENSG00000105854.12 TPM= 3.5 Transcript Type= protein_coding
chr7	95583499	95596491	95583499	95596491	-	ENST00000005178.5@PDK4	ENST00000005178.5	protein_coding	95596164,95595023,95593699,95592760,95592511,95591988,95589640,95587727,95587418,95587010,95583499	95596491,95595164,95593770,95592944,95592597,95592065,95589716,95587825,95587528,95587123,95585781	Gene ID= ENSG00000004799.7 TPM= 269.71 Transcript Type= protein_coding
chr7	96120220	96322099	96120220	96322099	-	transcript3828.chr7.nic@SLC25A13	transcript3828.chr7.nic	protein_coding	96321942,96296898,96277196,96208838,96193037,96191109,96189581,96189294,96184927,96184277,96171472,96170045,96146556,96131743,96121839,96121655,96120220	96322099,96296951,96277338,96208977,96193183,96191247,96189674,96189378,96185011,96184435,96171524,96170125,96146696,96131881,96121997,96121745,96121377	Gene ID= ENSG00000004864.13 TPM= 3.5 Transcript Type= NA
chr7	96120220	96322048	96120220	96322048	-	transcript3829.chr7.nnic@SLC25A13	transcript3829.chr7.nnic	protein_coding	96321942,96296898,96277196,96234802,96208838,96193037,96191109,96189294,96184927,96184277,96171472,96170045,96146556,96131743,96121839,96121655,96120220	96322048,96296951,96277338,96234917,96208977,96193183,96191247,96189378,96185011,96184435,96171524,96170125,96146696,96131881,96121997,96121745,96121377	Gene ID= ENSG00000004864.13 TPM= 3.5 Transcript Type= NA
chr7	96183194	96189570	96183194	96189570	-	transcript3836.chr7.nic@SLC25A13	transcript3836.chr7.nic	protein_coding	96189294,96183194	96189570,96185011	Gene ID= ENSG00000004864.13 TPM= 2.34 Transcript Type= NA
chr7	96687951	96709891	96687951	96709891	-	ENST00000248566.3@SEM1	ENST00000248566.3	protein_coding	96709688,96694798,96687951	96709891,96694891,96688966	Gene ID= ENSG00000127922.9 TPM= 49.04 Transcript Type= protein_coding
chr7	97116590	97181763	97116590	97181763	+	ENST00000432641.2@SDHAF3	ENST00000432641.2	protein_coding	97116590,97181012	97117897,97181763	Gene ID= ENSG00000196636.7 TPM= 19.85 Transcript Type= protein_coding
chr7	97852128	97972344	97852128	97972344	-	transcript3848.chr7.nnic@AC079781.5	transcript3848.chr7.nnic	processed_transcript	97972135,97969770,97937080,97928082,97872351,97869778,97868908,97864259,97859213,97858854,97858278,97856690,97855353,97854580,97853305,97853060,97852128	97972344,97969845,97937160,97928777,97872449,97869813,97869179,97864496,97859398,97858955,97858405,97856816,97855459,97854680,97853386,97853215,97852468	Gene ID= ENSG00000284707.1 TPM= 4.47 Transcript Type= NA
chr7	97852128	97972351	97852128	97972351	-	transcript3851.chr7.nnic@AC079781.5	transcript3851.chr7.nnic	processed_transcript	97972135,97937080,97928082,97872351,97869778,97868908,97864259,97859213,97858854,97858278,97856690,97855353,97854580,97853305,97853060,97852128	97972351,97937160,97928777,97872449,97869813,97869179,97864496,97859398,97858955,97858405,97856816,97855459,97854680,97853386,97853215,97852468	Gene ID= ENSG00000284707.1 TPM= 9.14 Transcript Type= NA
chr7	97922780	97972351	97922780	97972351	-	transcript3867.chr7.nnic@AC079781.5	transcript3867.chr7.nnic	processed_transcript	97972135,97937080,97928710,97928082,97922780	97972351,97937160,97928777,97928317,97923083	Gene ID= ENSG00000284707.1 TPM= 3.5 Transcript Type= NA
chr7	97922780	97972351	97922780	97972351	-	transcript3869.chr7.nnic@AC079781.5	transcript3869.chr7.nnic	processed_transcript	97972135,97937080,97928082,97922780	97972351,97937160,97928777,97923083	Gene ID= ENSG00000284707.1 TPM= 4.67 Transcript Type= NA
chr7	97927072	97972351	97927072	97972351	-	transcript3875.chr7.nic@AC079781.5	transcript3875.chr7.nic	processed_transcript	97972135,97937080,97927072	97972351,97937160,97928777	Gene ID= ENSG00000284707.1 TPM= 3.5 Transcript Type= NA
chr7	97852131	97872471	97852131	97872471	-	ENST00000394308.7@ASNS	ENST00000394308.7	protein_coding	97872351,97869778,97868908,97864259,97859213,97858854,97858278,97856690,97855353,97854580,97853305,97853060,97852131	97872471,97869813,97869179,97864496,97859398,97858955,97858405,97856816,97855459,97854680,97853386,97853215,97852468	Gene ID= ENSG00000070669.16 TPM= 17.9 Transcript Type= protein_coding
chr7	97919051	97921867	97919051	97921867	-	transcript3885.chr7.nnic@NA	transcript3885.chr7.nnic	NA	97919051	97921867	Gene ID= novel_gene_chr7_3886 TPM= 2.34 Transcript Type= NA
chr7	97970381	97972321	97970381	97972321	-	transcript3883.chr7.nnic@NA	transcript3883.chr7.nnic	NA	97970381	97972321	Gene ID= novel_gene_chr7_3884 TPM= 2.34 Transcript Type= NA
chr7	98105746	98107399	98105746	98107399	-	transcript3889.chr7.nnic@NA	transcript3889.chr7.nnic	NA	98105746	98107399	Gene ID= novel_gene_chr7_3890 TPM= 2.34 Transcript Type= NA
chr7	98106885	98209633	98106885	98209633	+	ENST00000297293.5@LMTK2	ENST00000297293.5	protein_coding	98106885,98137315,98141397,98151382,98154758,98159338,98171541,98185051,98186877,98190728,98191614,98203574,98203944,98205464	98107280,98137442,98141541,98151455,98154876,98159425,98171674,98185135,98186998,98190877,98194572,98203706,98204186,98209633	Gene ID= ENSG00000164715.5 TPM= 39.7 Transcript Type= protein_coding
chr7	98214624	98252251	98214624	98252251	-	ENST00000447648.6@TECPR1	ENST00000447648.6	protein_coding	98252126,98251394,98245922,98244885,98244571,98243467,98241070,98240851,98238509,98236776,98233421,98232827,98231804,98231224,98230961,98229039,98228014,98225006,98224801,98223662,98222990,98222386,98221661,98217936,98217692,98214624	98252251,98251548,98246165,98245067,98244693,98243592,98241244,98240951,98238610,98236921,98233911,98232972,98231959,98231373,98231118,98229166,98228116,98225102,98224880,98223718,98223170,98222521,98221753,98218042,98217811,98217503	Gene ID= ENSG00000205356.9 TPM= 5.84 Transcript Type= protein_coding
chr7	98283602	98291522	98283602	98291522	+	transcript3937.chr7.nnic@BRI3	transcript3937.chr7.nnic	protein_coding	98283602,98291111	98283855,98291522	Gene ID= ENSG00000164713.9 TPM= 7.39 Transcript Type= NA
chr7	98252379	98291524	98252379	98291524	+	ENST00000456357.6@BRI3	ENST00000456357.6	protein_coding	98252379,98282351,98291111	98252528,98282453,98291524	Gene ID= ENSG00000164713.9 TPM= 13.81 Transcript Type= processed_transcript
chr7	98281675	98291524	98281675	98291524	+	ENST00000297290.3@BRI3	ENST00000297290.3	protein_coding	98281675,98282351,98291111	98281937,98282453,98291524	Gene ID= ENSG00000164713.9 TPM= 85.04 Transcript Type= protein_coding
chr7	98288625	98291527	98288625	98291527	+	transcript3938.chr7.nnic@NA	transcript3938.chr7.nnic	NA	98288625	98291527	Gene ID= novel_gene_chr7_3939 TPM= 23.35 Transcript Type= NA
chr7	98291651	98305175	98291651	98305175	-	transcript3930.chr7.nic@BAIAP2L1	transcript3930.chr7.nic	protein_coding	98304196,98294074,98291651	98305175,98294111,98293596	Gene ID= ENSG00000006453.13 TPM= 4.67 Transcript Type= NA
chr7	98291651	98401068	98291651	98401068	-	ENST00000005260.8@BAIAP2L1	ENST00000005260.8	protein_coding	98400802,98362357,98355042,98320237,98320058,98317219,98315460,98312097,98310445,98307689,98306439,98304196,98294074,98291651	98401068,98362432,98355128,98320298,98320129,98317356,98315612,98312264,98310592,98307896,98306516,98304376,98294111,98293596	Gene ID= ENSG00000006453.13 TPM= 12.84 Transcript Type= protein_coding
chr7	98307251	98310442	98307251	98310442	+	transcript3942.chr7.nnic@NA	transcript3942.chr7.nnic	NA	98307251	98310442	Gene ID= novel_gene_chr7_3943 TPM= 5.84 Transcript Type= NA
chr7	98617297	98629868	98617297	98629868	+	ENST00000265634.3@NPTX2	ENST00000265634.3	protein_coding	98617297,98619643,98624922,98627165,98628402	98617887,98619859,98625166,98627344,98629868	Gene ID= ENSG00000106236.3 TPM= 1.17 Transcript Type= protein_coding
chr7	98846488	98870036	98846488	98870036	-	ENST00000339375.8@TMEM130	ENST00000339375.8	protein_coding	98869777,98863095,98860179,98856017,98855240,98851421,98848583,98846488	98870036,98863400,98860338,98856183,98855324,98851623,98848695,98848208	Gene ID= ENSG00000166448.14 TPM= 17.51 Transcript Type= protein_coding
chr7	99027438	99144019	99027438	99144019	-	ENST00000361368.6@SMURF1	ENST00000361368.6	protein_coding	99143726,99061799,99060599,99057418,99057205,99054790,99052205,99051357,99049563,99047684,99045698,99042118,99040378,99038388,99037067,99035515,99033037,99027438	99144019,99061837,99060707,99057551,99057270,99054865,99052446,99051441,99049709,99047882,99045801,99042232,99040556,99038525,99037187,99035716,99033121,99030683	Gene ID= ENSG00000198742.9 TPM= 31.53 Transcript Type= protein_coding
chr7	99325910	99366257	99325910	99366257	+	ENST00000262942.9@ARPC1A	ENST00000262942.9	protein_coding	99325910,99333325,99338181,99344293,99348852,99353909,99358340,99359545,99363543,99365891	99326004,99333417,99338285,99344515,99348959,99354121,99358415,99359738,99363633,99366257	Gene ID= ENSG00000241685.9 TPM= 235.85 Transcript Type= protein_coding
chr7	99374675	99394801	99374675	99394801	+	ENST00000252725.9@ARPC1B	ENST00000252725.9	protein_coding	99374675,99385702,99386685,99388039,99389905,99390893,99391178,99392671,99394029,99394451	99374781,99385778,99386789,99388261,99390012,99391099,99391253,99392876,99394119,99394801	Gene ID= ENSG00000130429.12 TPM= 470.54 Transcript Type= protein_coding
chr7	99374730	99394776	99374730	99394776	+	ENST00000451682.5@ARPC1B	ENST00000451682.5	protein_coding	99374730,99376433,99377338,99385702,99386685,99388039,99389905,99390893,99391178,99392671,99394029,99394451	99374781,99376574,99377439,99385778,99386789,99388261,99390012,99391099,99391253,99392876,99394119,99394776	Gene ID= ENSG00000130429.12 TPM= 4.67 Transcript Type= protein_coding
chr7	99383277	99385100	99383277	99385100	-	transcript4039.chr7.nnic@NA	transcript4039.chr7.nnic	NA	99383277	99385100	Gene ID= novel_gene_chr7_4040 TPM= 3.5 Transcript Type= NA
chr7	99390371	99392779	99390371	99392779	-	transcript4035.chr7.nnic@NA	transcript4035.chr7.nnic	NA	99390371	99392779	Gene ID= novel_gene_chr7_4036 TPM= 7.01 Transcript Type= NA
chr7	99394963	99408829	99394963	99408829	-	ENST00000350498.7@PDAP1	ENST00000350498.7	protein_coding	99408536,99404862,99403398,99400303,99397862,99394963	99408829,99404953,99403505,99400424,99398013,99396740	Gene ID= ENSG00000106244.12 TPM= 86.4 Transcript Type= protein_coding
chr7	99408641	99419616	99408641	99419616	+	ENST00000403633.6@BUD31	ENST00000403633.6	protein_coding	99408641,99410034,99411064,99416138,99417429,99419391	99409004,99410169,99411186,99416260,99417595,99419616	Gene ID= ENSG00000106245.10 TPM= 63.63 Transcript Type= protein_coding
chr7	99408978	99419608	99408978	99419608	+	ENST00000222969.9@BUD31	ENST00000222969.9	protein_coding	99408978,99410034,99411064,99416138,99417429,99419391	99409245,99410169,99411186,99416260,99417595,99419608	Gene ID= ENSG00000106245.10 TPM= 20.43 Transcript Type= protein_coding
chr7	99419126	99438798	99419126	99438798	-	transcript4011.chr7.nic@PTCD1	transcript4011.chr7.nic	protein_coding	99438692,99434790,99432924,99429588,99429103,99424795,99423775,99419126	99438798,99435268,99433418,99429806,99429204,99425616,99423957,99420149	Gene ID= ENSG00000106246.17 TPM= 10.51 Transcript Type= NA
chr7	99416739	99438916	99416739	99438916	-	ENST00000292478.8@PTCD1	ENST00000292478.8	protein_coding	99438692,99434790,99433278,99429588,99429103,99424795,99423775,99416739	99438916,99435268,99433418,99429806,99429204,99425616,99423957,99420149	Gene ID= ENSG00000106246.17 TPM= 3.5 Transcript Type= protein_coding
chr7	99438894	99457371	99438894	99457371	+	transcript4018.chr7.nic@CPSF4	transcript4018.chr7.nic	protein_coding	99438894,99444789,99448121,99450276,99450702,99452368,99456432	99439185,99444839,99448273,99450371,99450795,99454136,99457371	Gene ID= ENSG00000160917.14 TPM= 16.35 Transcript Type= NA
chr7	99438922	99457342	99438922	99457342	+	ENST00000436336.6@CPSF4	ENST00000436336.6	protein_coding	99438922,99444789,99448121,99450276,99450702,99452368,99454041,99456432	99439185,99444839,99448273,99450371,99450795,99452440,99454136,99457342	Gene ID= ENSG00000160917.14 TPM= 53.71 Transcript Type= protein_coding
chr7	99447591	99450315	99447591	99450315	-	transcript4037.chr7.nnic@NA	transcript4037.chr7.nnic	NA	99447591	99450315	Gene ID= novel_gene_chr7_4038 TPM= 2.34 Transcript Type= NA
chr7	99458195	99466331	99458195	99466331	-	ENST00000292475.7@ATP5J2	ENST00000292475.7	protein_coding	99466111,99460086,99459147,99458195	99466331,99460193,99459263,99458355	Gene ID= ENSG00000241468.7 TPM= 23.35 Transcript Type= protein_coding
chr7	99458197	99466167	99458197	99466167	-	ENST00000488775.5@ATP5J2	ENST00000488775.5	protein_coding	99466129,99460086,99458197	99466167,99460193,99458355	Gene ID= ENSG00000241468.7 TPM= 4.67 Transcript Type= protein_coding
chr7	99458195	99466164	99458195	99466164	-	ENST00000359832.8@ATP5J2	ENST00000359832.8	protein_coding	99466111,99460086,99458195	99466164,99460193,99458355	Gene ID= ENSG00000241468.7 TPM= 4.67 Transcript Type= protein_coding
chr7	99458187	99461769	99458187	99461769	-	transcript4074.chr7.nnic@NA	transcript4074.chr7.nnic	NA	99458187	99461769	Gene ID= novel_gene_chr7_4075 TPM= 2.34 Transcript Type= NA
chr7	99486519	99500318	99486519	99500318	-	transcript4067.chr7.nic@ZNF394	transcript4067.chr7.nic	protein_coding	99499638,99498716,99486519	99500318,99498842,99486963	Gene ID= ENSG00000160908.14 TPM= 3.5 Transcript Type= NA
chr7	99493240	99500297	99493240	99500297	-	ENST00000337673.6@ZNF394	ENST00000337673.6	protein_coding	99499638,99498716,99493240	99500297,99498842,99494631	Gene ID= ENSG00000160908.14 TPM= 30.94 Transcript Type= protein_coding
chr7	99493242	99500264	99493242	99500264	-	ENST00000426306.2@ZNF394	ENST00000426306.2	protein_coding	99499638,99493242	99500264,99494631	Gene ID= ENSG00000160908.14 TPM= 5.25 Transcript Type= protein_coding
chr7	99504651	99533784	99504651	99533784	+	ENST00000326775.9@ZKSCAN5	ENST00000326775.9	protein_coding	99504651,99506005,99512453,99519827,99520169,99525813,99531108	99504733,99506458,99512591,99519909,99520304,99526418,99533784	Gene ID= ENSG00000196652.11 TPM= 1.17 Transcript Type= protein_coding
chr7	99505255	99534106	99505255	99534106	+	transcript4053.chr7.nic@ZKSCAN5	transcript4053.chr7.nic	protein_coding	99505255,99512453,99519827,99520169,99525813,99531108	99506458,99512591,99519909,99520304,99526418,99534106	Gene ID= ENSG00000196652.11 TPM= 2.34 Transcript Type= NA
chr7	99546308	99552134	99546308	99552134	-	ENST00000449309.1@FAM200A	ENST00000449309.1	protein_coding	99551854,99546308	99552134,99548506	Gene ID= ENSG00000221909.2 TPM= 7.01 Transcript Type= protein_coding
chr7	99557749	99558975	99557749	99558975	-	transcript4110.chr7.nnic@NA	transcript4110.chr7.nnic	NA	99557749	99558975	Gene ID= novel_gene_chr7_4111 TPM= 10.51 Transcript Type= NA
chr7	99558796	99564705	99558796	99564705	+	transcript4093.chr7.nic@ZNF655	transcript4093.chr7.nic	protein_coding	99558796,99560533,99561888,99562368,99563863	99559017,99560695,99561973,99562494,99564705	Gene ID= ENSG00000197343.10 TPM= 2.92 Transcript Type= NA
chr7	99558862	99576453	99558862	99576453	+	ENST00000394163.2@ZNF655	ENST00000394163.2	protein_coding	99558862,99560533,99572245	99559017,99560695,99576453	Gene ID= ENSG00000197343.10 TPM= 6.62 Transcript Type= protein_coding
chr7	99558713	99576439	99558713	99576439	+	ENST00000425063.5@ZNF655	ENST00000425063.5	protein_coding	99558713,99560533,99561888,99571688,99572245	99558787,99560695,99561973,99571792,99576439	Gene ID= ENSG00000197343.10 TPM= 5.45 Transcript Type= protein_coding
chr7	99558825	99576449	99558825	99576449	+	ENST00000424881.5@ZNF655	ENST00000424881.5	protein_coding	99558825,99560533,99571688,99572245	99559017,99560695,99571792,99576449	Gene ID= ENSG00000197343.10 TPM= 6.62 Transcript Type= protein_coding
chr7	99559787	99564359	99559787	99564359	-	transcript4112.chr7.nnic@NA	transcript4112.chr7.nnic	NA	99559787	99564359	Gene ID= novel_gene_chr7_4113 TPM= 30.36 Transcript Type= NA
chr7	99563698	99565393	99563698	99565393	-	transcript4114.chr7.nnic@NA	transcript4114.chr7.nnic	NA	99563698	99565393	Gene ID= novel_gene_chr7_4115 TPM= 2.92 Transcript Type= NA
chr7	99616966	99720276	99616966	99720276	+	transcript4128.chr7.nnic@ZSCAN25	transcript4128.chr7.nnic	protein_coding	99616966,99618525,99619048,99619561,99621373,99622549,99624057,99707829,99716977	99617016,99618651,99619132,99619993,99621574,99622640,99624180,99707927,99720276	Gene ID= ENSG00000197037.10 TPM= 2.34 Transcript Type= NA
chr7	99648194	99679996	99648194	99679996	-	ENST00000222982.8@CYP3A5	ENST00000222982.8	protein_coding	99679826,99676115,99674533,99672580,99666952,99666601,99665166,99663968,99662816,99660499,99652553,99650073,99648194	99679996,99676208,99674585,99672679,99667065,99666689,99665314,99664095,99662882,99660659,99652779,99650232,99648400	Gene ID= ENSG00000106258.13 TPM= 9.34 Transcript Type= protein_coding
chr7	99648194	99679996	99648194	99679996	-	transcript4120.chr7.nic@CYP3A5	transcript4120.chr7.nic	protein_coding	99679826,99676115,99674533,99672784,99672580,99666952,99666601,99665166,99662816,99660499,99652553,99650073,99648194	99679996,99676208,99674585,99672915,99672679,99667065,99666689,99665314,99664095,99660659,99652779,99650232,99648400	Gene ID= ENSG00000106258.13 TPM= 2.34 Transcript Type= NA
chr7	99669671	99679996	99669671	99679996	-	transcript4135.chr7.nic@CYP3A5	transcript4135.chr7.nic	protein_coding	99679826,99676115,99672580,99669671	99679996,99676208,99674585,99671878	Gene ID= ENSG00000106258.13 TPM= 2.34 Transcript Type= NA
chr7	99890413	99919600	99890413	99919600	-	ENST00000349062.6@TRIM4	ENST00000349062.6	protein_coding	99919009,99909565,99908582,99903576,99903218,99890413	99919600,99909660,99908812,99903598,99903315,99892746	Gene ID= ENSG00000146833.15 TPM= 11.68 Transcript Type= protein_coding
chr7	99966730	99976157	99966730	99976157	-	ENST00000292401.8@AZGP1	ENST00000292401.8	protein_coding	99975945,99971746,99968155,99966730	99976157,99972006,99968430,99967286	Gene ID= ENSG00000160862.12 TPM= 99.25 Transcript Type= protein_coding
chr7	99966738	99976017	99966738	99976017	-	ENST00000411734.1@AZGP1	ENST00000411734.1	protein_coding	99975945,99971746,99966738	99976017,99972006,99968430	Gene ID= ENSG00000160862.12 TPM= 2.34 Transcript Type= protein_coding
chr7	100015581	100041689	100015581	100041689	+	ENST00000324306.10@ZKSCAN1	ENST00000324306.10	protein_coding	100015581,100023419,100024154,100029861,100030249,100033305	100015726,100023932,100024307,100029952,100030375,100041689	Gene ID= ENSG00000106261.16 TPM= 15.18 Transcript Type= protein_coding
chr7	100015599	100024960	100015599	100024960	+	ENST00000482979.5@ZKSCAN1	ENST00000482979.5	protein_coding	100015599,100023419,100024154	100015726,100023932,100024960	Gene ID= ENSG00000106261.16 TPM= 2.34 Transcript Type= retained_intron
chr7	100049773	100065037	100049773	100065037	+	transcript4166.chr7.nic@ZSCAN21	transcript4166.chr7.nic	protein_coding	100049773,100051478,100056911,100057698,100063788	100049841,100051610,100057405,100057890,100065037	Gene ID= ENSG00000166529.14 TPM= 5.06 Transcript Type= NA
chr7	100049773	100065037	100049773	100065037	+	transcript4167.chr7.nnic@ZSCAN21	transcript4167.chr7.nnic	protein_coding	100049773,100051478,100056911,100057698,100063788	100049841,100051646,100057405,100057890,100065037	Gene ID= ENSG00000166529.14 TPM= 2.72 Transcript Type= NA
chr7	100049774	100065036	100049774	100065036	+	ENST00000292450.8@ZSCAN21	ENST00000292450.8	protein_coding	100049774,100056911,100057698,100063788	100049841,100057405,100057890,100065036	Gene ID= ENSG00000166529.14 TPM= 7.39 Transcript Type= protein_coding
chr7	100069972	100081764	100069972	100081764	-	ENST00000424697.5@ZNF3	ENST00000424697.5	protein_coding	100081635,100077303,100075542,100075135,100069972	100081764,100077433,100075630,100075261,100072212	Gene ID= ENSG00000166526.16 TPM= 2.34 Transcript Type= protein_coding
chr7	100069988	100081740	100069988	100081740	-	ENST00000299667.8@ZNF3	ENST00000299667.8	protein_coding	100081635,100079536,100077303,100075542,100075135,100069988	100081740,100079656,100077433,100075630,100075261,100072212	Gene ID= ENSG00000166526.16 TPM= 28.02 Transcript Type= protein_coding
chr7	100088954	100092200	100088954	100092200	+	ENST00000303904.7@COPS6	ENST00000303904.7	protein_coding	100088954,100089290,100089615,100090399,100090592,100090902,100091038,100091238,100091420,100091649	100089066,100089415,100089746,100090487,100090654,100090949,100091152,100091330,100091520,100092200	Gene ID= ENSG00000168090.9 TPM= 197.32 Transcript Type= protein_coding
chr7	100088981	100091905	100088981	100091905	+	ENST00000418625.5@COPS6	ENST00000418625.5	protein_coding	100088981,100089293,100089615,100090399,100090592,100090902,100091038,100091238,100091420,100091649	100089066,100089415,100089746,100090487,100090654,100090949,100091152,100091330,100091520,100091905	Gene ID= ENSG00000168090.9 TPM= 163.46 Transcript Type= protein_coding
chr7	100092781	100100769	100092781	100100769	-	transcript4190.chr7.nic@MCM7	transcript4190.chr7.nic	protein_coding	100100213,100100014,100099589,100099279,100099023,100098578,100098141,100097834,100097614,100097301,100095774,100095387,100094173,100093292,100092781	100100769,100100093,100099753,100099403,100099203,100098715,100098290,100097948,100097745,100097384,100096167,100095470,100094341,100093401,100093133	Gene ID= ENSG00000166508.17 TPM= 37.13 Transcript Type= NA
chr7	100092781	100100758	100092781	100100758	-	transcript4191.chr7.nnic@MCM7	transcript4191.chr7.nnic	protein_coding	100100544,100100014,100099589,100099279,100099023,100098578,100098141,100097834,100097614,100097301,100095774,100095387,100094173,100093292,100092781	100100758,100100093,100099753,100099403,100099203,100098715,100098290,100097948,100097745,100097384,100096167,100095470,100094341,100093401,100093133	Gene ID= ENSG00000166508.17 TPM= 7.94 Transcript Type= NA
chr7	100092781	100101940	100092781	100101940	-	ENST00000303887.9@MCM7	ENST00000303887.9	protein_coding	100101264,100100014,100099589,100099279,100099023,100098578,100098141,100097834,100097614,100097301,100095774,100095387,100094173,100093292,100092781	100101940,100100093,100099753,100099403,100099203,100098715,100098290,100097948,100097745,100097384,100096167,100095470,100094341,100093401,100093133	Gene ID= ENSG00000166508.17 TPM= 25.45 Transcript Type= protein_coding
chr7	100092781	100100756	100092781	100100756	-	transcript4201.chr7.nic@MCM7	transcript4201.chr7.nic	protein_coding	100100014,100099589,100099279,100099023,100098578,100098141,100097834,100097614,100097301,100095774,100095387,100094173,100093292,100092781	100100756,100099753,100099403,100099203,100098715,100098290,100097948,100097745,100097384,100096167,100095470,100094341,100093401,100093133	Gene ID= ENSG00000166508.17 TPM= 4.44 Transcript Type= NA
chr7	100092729	100100780	100092729	100100780	-	ENST00000354230.7@MCM7	ENST00000354230.7	protein_coding	100100213,100100014,100099589,100099023,100098578,100098141,100097834,100097614,100097301,100095774,100095387,100094173,100093292,100092729	100100780,100100093,100099753,100099403,100098715,100098290,100097948,100097745,100097384,100096167,100095470,100094341,100093401,100093133	Gene ID= ENSG00000166508.17 TPM= 3.27 Transcript Type= protein_coding
chr7	100101497	100110345	100101497	100110345	+	transcript4182.chr7.nic@AP4M1	transcript4182.chr7.nic	protein_coding	100101497,100101880,100102675,100102864,100103409,100103612,100104092,100104874,100105045,100105240,100105445,100105959,100106241,100106403,100110191	100101772,100101968,100102781,100102960,100103519,100103692,100104154,100104940,100105098,100105346,100105539,100106003,100106291,100106514,100110345	Gene ID= ENSG00000221838.9 TPM= 2.34 Transcript Type= NA
chr7	100101578	100107140	100101578	100107140	+	transcript4199.chr7.nic@AP4M1	transcript4199.chr7.nic	protein_coding	100101578,100101880,100102675,100102864,100103409,100103612,100104092,100104874,100105045,100105240,100105445,100105959,100106403,100106658	100101772,100101968,100102781,100102960,100103519,100103692,100104154,100104940,100105098,100105346,100105539,100106291,100106514,100107140	Gene ID= ENSG00000221838.9 TPM= 3.5 Transcript Type= NA
chr7	100101648	100107140	100101648	100107140	+	transcript4204.chr7.nic@AP4M1	transcript4204.chr7.nic	protein_coding	100101648,100101880,100102675,100102864,100103409,100103612,100104092,100104874,100105045,100105240,100105445,100105959,100106658	100101772,100101968,100102781,100102960,100103519,100103692,100104154,100104940,100105098,100105346,100105539,100106514,100107140	Gene ID= ENSG00000221838.9 TPM= 3.5 Transcript Type= NA
chr7	100101673	100107140	100101673	100107140	+	transcript4205.chr7.nic@AP4M1	transcript4205.chr7.nic	protein_coding	100101673,100101880,100103409,100103612,100104092,100104874,100105045,100105240,100105445,100105959,100106241,100106403,100106658	100101772,100101968,100103519,100103692,100104154,100104940,100105098,100105346,100105539,100106003,100106291,100106514,100107140	Gene ID= ENSG00000221838.9 TPM= 2.34 Transcript Type= NA
chr7	100101557	100107179	100101557	100107179	+	ENST00000359593.8@AP4M1	ENST00000359593.8	protein_coding	100101557,100101880,100102675,100102864,100103409,100103612,100104092,100104874,100105045,100105240,100105445,100105959,100106241,100106403,100106658	100101772,100101968,100102781,100102960,100103519,100103692,100104154,100104940,100105098,100105346,100105539,100106003,100106291,100106514,100107179	Gene ID= ENSG00000221838.9 TPM= 19.27 Transcript Type= protein_coding
chr7	100101557	100107177	100101557	100107177	+	ENST00000429084.5@AP4M1	ENST00000429084.5	protein_coding	100101557,100101880,100102675,100102864,100103409,100103612,100104092,100104874,100105045,100105240,100105445,100105959,100106241,100106403,100106658	100101772,100101989,100102781,100102960,100103519,100103692,100104154,100104940,100105098,100105346,100105539,100106003,100106291,100106514,100107177	Gene ID= ENSG00000221838.9 TPM= 4.09 Transcript Type= protein_coding
chr7	100106353	100109034	100106353	100109034	+	transcript4231.chr7.nnic@NA	transcript4231.chr7.nnic	NA	100106353	100109034	Gene ID= novel_gene_chr7_4232 TPM= 2.34 Transcript Type= NA
chr7	100107078	100119358	100107078	100119358	-	transcript4178.chr7.nic@TAF6	transcript4178.chr7.nic	protein_coding	100119204,100118518,100114054,100113868,100113616,100113349,100112798,100112108,100111922,100111728,100111139,100110200,100109948,100108367,100107926,100107078	100119358,100118649,100114268,100113954,100113769,100113405,100112917,100112253,100111999,100111829,100111321,100110274,100110073,100108540,100108123,100107623	Gene ID= ENSG00000106290.14 TPM= 7.74 Transcript Type= NA
chr7	100107070	100119398	100107070	100119398	-	ENST00000453269.6@TAF6	ENST00000453269.6	protein_coding	100119204,100114054,100113868,100113616,100113349,100112798,100112108,100111922,100111728,100111139,100110200,100109948,100108367,100107926,100107070	100119398,100114268,100113954,100113769,100113405,100112917,100112253,100111999,100111829,100111321,100110274,100110073,100108540,100108123,100107623	Gene ID= ENSG00000106290.14 TPM= 41.6 Transcript Type= protein_coding
chr7	100107078	100119364	100107078	100119364	-	ENST00000452041.5@TAF6	ENST00000452041.5	protein_coding	100119329,100114054,100113868,100113616,100113349,100112798,100112108,100111922,100111728,100111139,100110200,100109948,100108367,100107926,100107078	100119364,100114268,100113954,100113769,100113405,100112917,100112253,100111999,100111829,100111321,100110274,100110073,100108540,100108123,100107623	Gene ID= ENSG00000106290.14 TPM= 7.74 Transcript Type= protein_coding
chr7	100107078	100119363	100107078	100119363	-	transcript4197.chr7.nic@TAF6	transcript4197.chr7.nic	protein_coding	100119204,100114084,100113868,100113616,100113349,100112798,100112108,100111922,100111728,100111139,100110200,100109948,100108367,100107926,100107078	100119363,100114268,100113954,100113769,100113405,100112917,100112253,100111999,100111829,100111321,100110274,100110073,100108540,100108123,100107623	Gene ID= ENSG00000106290.14 TPM= 8.52 Transcript Type= NA
chr7	100107078	100119363	100107078	100119363	-	transcript4203.chr7.nic@TAF6	transcript4203.chr7.nic	protein_coding	100119204,100114054,100113868,100113616,100113349,100112798,100112108,100111922,100111728,100111139,100109948,100108367,100107926,100107078	100119363,100114268,100113954,100113769,100113405,100112917,100112253,100111999,100111829,100111321,100110274,100108540,100108123,100107623	Gene ID= ENSG00000106290.14 TPM= 4.44 Transcript Type= NA
chr7	100119613	100125511	100119613	100125511	+	ENST00000262932.4@CNPY4	ENST00000262932.4	protein_coding	100119613,100122259,100122481,100122784,100124514,100124725	100119862,100122385,100122577,100122906,100124631,100125511	Gene ID= ENSG00000166997.7 TPM= 8.17 Transcript Type= protein_coding
chr7	100126694	100128498	100126694	100128498	+	ENST00000398075.3@MBLAC1	ENST00000398075.3	protein_coding	100126694,100127368	100127064,100128498	Gene ID= ENSG00000214309.4 TPM= 2.34 Transcript Type= protein_coding
chr7	100148978	100154212	100148978	100154212	+	ENST00000468582.5@LAMTOR4	ENST00000468582.5	protein_coding	100148978,100149499,100153400,100153867	100149053,100149579,100153517,100154212	Gene ID= ENSG00000188186.10 TPM= 8.47 Transcript Type= protein_coding
chr7	100148907	100154203	100148907	100154203	+	ENST00000341942.9@LAMTOR4	ENST00000341942.9	protein_coding	100148907,100149499,100153400,100153867	100148975,100149579,100153517,100154203	Gene ID= ENSG00000188186.10 TPM= 55.17 Transcript Type= protein_coding
chr7	100148934	100154203	100148934	100154203	+	ENST00000474831.5@LAMTOR4	ENST00000474831.5	protein_coding	100148934,100149499,100153400,100153867	100148975,100149565,100153517,100154203	Gene ID= ENSG00000188186.10 TPM= 2.04 Transcript Type= processed_transcript
chr7	100149357	100154203	100149357	100154203	+	ENST00000473459.5@LAMTOR4	ENST00000473459.5	protein_coding	100149357,100152716,100153400,100153867	100149579,100152757,100153517,100154203	Gene ID= ENSG00000188186.10 TPM= 2.04 Transcript Type= protein_coding
chr7	100154424	100158730	100154424	100158730	-	transcript4248.chr7.nic@C7orf43	transcript4248.chr7.nic	protein_coding	100157843,100157633,100157373,100157094,100156845,100156634,100155671,100155262,100154424	100158730,100157762,100157459,100157214,100156992,100156716,100156549,100155455,100155164	Gene ID= ENSG00000146826.16 TPM= 5.84 Transcript Type= NA
chr7	100154423	100158730	100154423	100158730	-	transcript4252.chr7.nic@C7orf43	transcript4252.chr7.nic	protein_coding	100157843,100157633,100157373,100154423	100158730,100157762,100157459,100157214	Gene ID= ENSG00000146826.16 TPM= 2.34 Transcript Type= NA
chr7	100154420	100158020	100154420	100158020	-	ENST00000457641.5@C7orf43	ENST00000457641.5	protein_coding	100157843,100157633,100157373,100157094,100156845,100156634,100156386,100155671,100155262,100154420	100158020,100157762,100157459,100157214,100156992,100156716,100156549,100155825,100155455,100155164	Gene ID= ENSG00000146826.16 TPM= 7.59 Transcript Type= protein_coding
chr7	100154420	100158685	100154420	100158685	-	ENST00000316937.7@C7orf43	ENST00000316937.7	protein_coding	100158089,100157843,100157633,100157373,100157094,100156845,100156634,100156386,100155671,100155262,100154420	100158685,100157938,100157762,100157459,100157214,100156992,100156716,100156549,100155825,100155455,100155164	Gene ID= ENSG00000146826.16 TPM= 13.43 Transcript Type= protein_coding
chr7	100159245	100168750	100159245	100168750	-	ENST00000360039.8@GAL3ST4	ENST00000360039.8	protein_coding	100168546,100166971,100166502,100159245	100168750,100167283,100166805,100160959	Gene ID= ENSG00000197093.10 TPM= 12.84 Transcript Type= protein_coding
chr7	100212022	100272214	100212022	100272214	-	ENST00000414739.3@GATS	ENST00000414739.3	protein_coding	100271838,100233604,100223882,100223570,100222597,100212022	100272214,100233674,100224075,100223698,100222720,100213133	Gene ID= ENSG00000239521.7 TPM= 4.67 Transcript Type= nonsense_mediated_decay
chr7	100318888	100335918	100318888	100335918	-	transcript4322.chr7.nnic@PMS2P1	transcript4322.chr7.nnic	unprocessed_pseudogene	100335838,100332442,100330463,100330182,100328836,100325691,100318888	100335918,100332581,100330549,100330284,100329019,100325779,100321084	Gene ID= ENSG00000078319.9 TPM= 3.5 Transcript Type= NA
chr7	100320913	100335969	100320913	100335969	-	transcript4326.chr7.nic@PMS2P1	transcript4326.chr7.nic	unprocessed_pseudogene	100335838,100332442,100330463,100330182,100328836,100320913	100335969,100332581,100330549,100330284,100329019,100321084	Gene ID= ENSG00000078319.9 TPM= 2.34 Transcript Type= NA
chr7	100325660	100335969	100325660	100335969	-	transcript4327.chr7.nnic@PMS2P1	transcript4327.chr7.nnic	unprocessed_pseudogene	100335838,100332442,100330463,100330182,100328836,100325660	100335969,100332581,100330549,100330284,100329019,100325779	Gene ID= ENSG00000078319.9 TPM= 2.34 Transcript Type= NA
chr7	100336075	100367733	100336075	100367733	+	transcript4260.chr7.nic@STAG3L5P-PVRIG2P-PILRB	transcript4260.chr7.nic	processed_transcript	100336075,100338179,100338773,100345865,100349717,100351252,100352163,100352564,100352761,100352997,100353210,100353373,100355143,100356750,100358220,100358690,100359337,100367349	100336220,100338264,100338889,100345968,100349887,100351410,100352478,100352667,100352914,100353123,100353270,100354012,100355240,100356883,100358366,100359079,100359537,100367733	Gene ID= ENSG00000272752.6 TPM= 3.89 Transcript Type= NA
chr7	100336079	100367831	100336079	100367831	+	transcript4282.chr7.nic@STAG3L5P-PVRIG2P-PILRB	transcript4282.chr7.nic	processed_transcript	100336079,100338179,100338773,100345865,100349731,100351252,100352564,100352997,100353210,100353373,100355143,100356750,100358220,100358690,100359337,100367349	100336337,100338264,100338889,100345968,100349887,100352478,100352914,100353123,100353270,100354012,100355240,100356883,100358366,100359079,100359537,100367831	Gene ID= ENSG00000272752.6 TPM= 5.64 Transcript Type= NA
chr7	100336079	100367831	100336079	100367831	+	transcript4295.chr7.nic@STAG3L5P-PVRIG2P-PILRB	transcript4295.chr7.nic	processed_transcript	100336079,100338179,100338773,100345865,100349717,100351252,100352564,100353210,100353373,100355143,100356750,100358220,100358690,100359337,100367349	100336337,100338264,100338889,100345968,100349887,100352478,100353123,100353270,100353483,100355240,100356883,100358366,100359079,100359537,100367831	Gene ID= ENSG00000272752.6 TPM= 6.42 Transcript Type= NA
chr7	100336079	100367733	100336079	100367733	+	transcript4302.chr7.nic@STAG3L5P-PVRIG2P-PILRB	transcript4302.chr7.nic	processed_transcript	100336079,100338179,100338773,100345865,100349799,100351252,100352564,100352997,100353210,100355143,100356750,100358220,100358690,100359337,100367349	100336337,100338264,100338889,100345968,100349887,100352478,100352914,100353123,100353270,100355240,100356883,100358366,100359079,100359537,100367733	Gene ID= ENSG00000272752.6 TPM= 3.5 Transcript Type= NA
chr7	100336079	100367733	100336079	100367733	+	transcript4305.chr7.nic@STAG3L5P-PVRIG2P-PILRB	transcript4305.chr7.nic	processed_transcript	100336079,100338179,100338773,100345865,100349799,100351252,100352564,100353210,100353373,100355143,100356750,100358220,100358690,100359337,100367349	100336337,100338264,100338889,100345968,100349887,100352478,100353123,100353270,100354012,100355240,100356883,100358366,100359079,100359537,100367733	Gene ID= ENSG00000272752.6 TPM= 7.39 Transcript Type= NA
chr7	100373445	100400099	100373445	100400099	+	ENST00000198536.6@PILRA	ENST00000198536.6	protein_coding	100373445,100374044,100389888,100397879,100399291,100399581,100399785	100373720,100374433,100390106,100397912,100399340,100399612,100400099	Gene ID= ENSG00000085514.15 TPM= 25.69 Transcript Type= protein_coding
chr7	100373528	100400096	100373528	100400096	+	ENST00000350573.2@PILRA	ENST00000350573.2	protein_coding	100373528,100374044,100397879,100399291,100399581,100399785	100373720,100374433,100397912,100399340,100399612,100400096	Gene ID= ENSG00000085514.15 TPM= 30.36 Transcript Type= protein_coding
chr7	100400873	100428664	100400873	100428664	-	ENST00000360951.8@ZCWPW1	ENST00000360951.8	protein_coding	100428568,100425030,100420622,100419630,100419111,100417066,100416305,100415975,100409428,100408539,100407228,100406694,100405013,100404178,100403694,100400873	100428664,100425136,100420678,100419883,100419189,100417183,100416456,100416097,100409544,100408659,100407303,100406798,100405093,100404244,100403785,100401336	Gene ID= ENSG00000078487.17 TPM= 1.17 Transcript Type= protein_coding
chr7	100429631	100434126	100429631	100434126	+	ENST00000310512.3@MEPCE	ENST00000310512.3	protein_coding	100429631,100432919,100433263,100433502	100431689,100433137,100433389,100434126	Gene ID= ENSG00000146834.13 TPM= 45.54 Transcript Type= protein_coding
chr7	100435282	100436565	100435282	100436565	-	ENST00000292330.2@PPP1R35	ENST00000292330.2	protein_coding	100436141,100435848,100435631,100435282	100436565,100436064,100435767,100435533	Gene ID= ENSG00000160813.6 TPM= 16.44 Transcript Type= protein_coding
chr7	100435283	100436509	100435283	100436509	-	transcript4342.chr7.nic@PPP1R35	transcript4342.chr7.nic	protein_coding	100436141,100435848,100435283	100436509,100436064,100435533	Gene ID= ENSG00000160813.6 TPM= 3.79 Transcript Type= NA
chr7	100435282	100436509	100435282	100436509	-	transcript4344.chr7.nic@PPP1R35	transcript4344.chr7.nic	protein_coding	100436141,100435282	100436509,100436064	Gene ID= ENSG00000160813.6 TPM= 11.68 Transcript Type= NA
chr7	100435282	100436423	100435282	100436423	-	ENST00000487452.1@PPP1R35	ENST00000487452.1	protein_coding	100435848,100435631,100435282	100436423,100435767,100435533	Gene ID= ENSG00000160813.6 TPM= 14.1 Transcript Type= retained_intron
chr7	100435282	100436136	100435282	100436136	-	ENST00000470295.5@PPP1R35	ENST00000470295.5	protein_coding	100435631,100435282	100436136,100435533	Gene ID= ENSG00000160813.6 TPM= 3.01 Transcript Type= retained_intron
chr7	100466519	100479214	100466519	100479214	-	transcript4350.chr7.nnic@TSC22D4	transcript4350.chr7.nnic	protein_coding	100478794,100477277,100474274,100467552,100466519	100479214,100478204,100474440,100467600,100467168	Gene ID= ENSG00000166925.8 TPM= 11.68 Transcript Type= NA
chr7	100466519	100479279	100466519	100479279	-	ENST00000300181.6@TSC22D4	ENST00000300181.6	protein_coding	100478794,100477277,100474274,100467552,100466519	100479279,100478307,100474440,100467600,100467168	Gene ID= ENSG00000166925.8 TPM= 25.69 Transcript Type= protein_coding
chr7	100466538	100479232	100466538	100479232	-	ENST00000393991.5@TSC22D4	ENST00000393991.5	protein_coding	100478794,100477277,100474274,100467552,100466538	100479232,100477459,100474440,100467600,100467168	Gene ID= ENSG00000166925.8 TPM= 9.34 Transcript Type= protein_coding
chr7	100539201	100565961	100539201	100565961	+	transcript4355.chr7.nic@AGFG2	transcript4355.chr7.nic	protein_coding	100539201,100548822,100550396,100553347,100554093,100555610,100556594,100562259,100562594,100562863,100563834,100564218,100564932	100539567,100548915,100550511,100553500,100554258,100555735,100556626,100562379,100562682,100562946,100563962,100564303,100565961	Gene ID= ENSG00000106351.12 TPM= 3.5 Transcript Type= NA
chr7	100539267	100565961	100539267	100565961	+	transcript4357.chr7.nnic@AGFG2	transcript4357.chr7.nnic	protein_coding	100539267,100548822,100550396,100553347,100554093,100555610,100562259,100562594,100562884,100563834,100564218,100564932	100539567,100548915,100550511,100553500,100554258,100555735,100562379,100562682,100562946,100563962,100564303,100565961	Gene ID= ENSG00000106351.12 TPM= 2.34 Transcript Type= NA
chr7	100539201	100565961	100539201	100565961	+	transcript4359.chr7.nnic@AGFG2	transcript4359.chr7.nnic	protein_coding	100539201,100548822,100550396,100553347,100554093,100555610,100562259,100562594,100563834,100564218,100564932	100539567,100548915,100550511,100553500,100554258,100555735,100562379,100562682,100563962,100564303,100565961	Gene ID= ENSG00000106351.12 TPM= 2.34 Transcript Type= NA
chr7	100560809	100565961	100560809	100565961	+	transcript4364.chr7.nic@AGFG2	transcript4364.chr7.nic	protein_coding	100560809,100562594,100562863,100563834,100564218,100564932	100562379,100562682,100562946,100563962,100564303,100565961	Gene ID= ENSG00000106351.12 TPM= 3.5 Transcript Type= NA
chr7	100539225	100568219	100539225	100568219	+	ENST00000300176.8@AGFG2	ENST00000300176.8	protein_coding	100539225,100548822,100550396,100553347,100554093,100555610,100562259,100562594,100562863,100563834,100564218,100564932	100539567,100548915,100550511,100553500,100554258,100555735,100562379,100562682,100562946,100563962,100564303,100568219	Gene ID= ENSG00000106351.12 TPM= 15.18 Transcript Type= protein_coding
chr7	100572232	100578700	100572232	100578700	-	ENST00000485071.2@AC069281.2	ENST00000485071.2	processed_transcript	100578650,100578399,100578159,100577822,100577664,100577497,100577273,100577086,100576694,100576238,100575871,100573297,100573106,100572860,100572654,100572232	100578700,100578511,100578258,100577912,100577740,100577558,100577389,100577154,100577005,100576323,100576008,100575782,100573212,100573013,100572751,100572571	Gene ID= ENSG00000274272.1 TPM= 4.67 Transcript Type= retained_intron
chr7	100574011	100586182	100574011	100586182	-	transcript4368.chr7.nic@LRCH4	transcript4368.chr7.nic	protein_coding	100585881,100582315,100582041,100581777,100578650,100578399,100578159,100577822,100577664,100577497,100577273,100577086,100576902,100576694,100576238,100575871,100575705,100574011	100586182,100582459,100582167,100581882,100578786,100578511,100578258,100577912,100577740,100577558,100577389,100577154,100577005,100576777,100576323,100576008,100575782,100574356	Gene ID= ENSG00000077454.15 TPM= 51.37 Transcript Type= NA
chr7	100574660	100586182	100574660	100586182	-	transcript4376.chr7.nic@LRCH4	transcript4376.chr7.nic	protein_coding	100585881,100582315,100582041,100581777,100578650,100578399,100578159,100577822,100577664,100577497,100577273,100577086,100576694,100576238,100575871,100575705,100574660	100586182,100582459,100582167,100581882,100578786,100578511,100578258,100577912,100577740,100577558,100577389,100577154,100577005,100576323,100576008,100575782,100575304	Gene ID= ENSG00000077454.15 TPM= 9.92 Transcript Type= NA
chr7	100574660	100586153	100574660	100586153	-	ENST00000310300.10@LRCH4	ENST00000310300.10	protein_coding	100585881,100582315,100582041,100581777,100578650,100578399,100578159,100577822,100577664,100577497,100577273,100577086,100576902,100576694,100576238,100575871,100575705,100574660	100586153,100582459,100582167,100581882,100578786,100578511,100578258,100577912,100577740,100577558,100577389,100577154,100577005,100576777,100576323,100576008,100575782,100575304	Gene ID= ENSG00000077454.15 TPM= 43.78 Transcript Type= protein_coding
chr7	100602177	100608175	100602177	100608175	+	ENST00000223061.5@PCOLCE	ENST00000223061.5	protein_coding	100602177,100603430,100603959,100605091,100605676,100606416,100607452,100607637,100607937	100602551,100603538,100604217,100605215,100605812,100606630,100607523,100607807,100608175	Gene ID= ENSG00000106333.12 TPM= 110.14 Transcript Type= protein_coding
chr7	100603181	100608171	100603181	100608171	+	transcript4389.chr7.nnic@PCOLCE	transcript4389.chr7.nnic	protein_coding	100603181,100603430,100603959,100605091,100605676,100606416,100607452,100607637,100607937	100603293,100603538,100604217,100605215,100605812,100606630,100607523,100607807,100608171	Gene ID= ENSG00000106333.12 TPM= 14.98 Transcript Type= NA
chr7	100602332	100608171	100602332	100608171	+	transcript4391.chr7.nic@PCOLCE	transcript4391.chr7.nic	protein_coding	100602332,100603430,100603959,100605091,100607452,100607637,100607937	100602551,100603538,100604217,100606630,100607523,100607807,100608171	Gene ID= ENSG00000106333.12 TPM= 11.48 Transcript Type= NA
chr7	100612522	100615373	100612522	100615373	+	transcript4398.chr7.nnic@MOSPD3	transcript4398.chr7.nnic	protein_coding	100612522,100613194,100613477,100614900,100615152	100612996,100613269,100613532,100615031,100615373	Gene ID= ENSG00000106330.11 TPM= 2.92 Transcript Type= NA
chr7	100612510	100615384	100612510	100615384	+	ENST00000393950.6@MOSPD3	ENST00000393950.6	protein_coding	100612510,100613194,100613477,100614867,100615152	100612996,100613269,100613706,100615031,100615384	Gene ID= ENSG00000106330.11 TPM= 25.1 Transcript Type= protein_coding
chr7	100673531	100679174	100673531	100679174	+	ENST00000303210.8@GNB2	ENST00000303210.8	protein_coding	100673531,100676177,100676535,100676693,100677352,100677498,100677752,100678098,100678398,100678695	100673923,100676322,100676573,100676799,100677415,100677660,100677818,100678299,100678614,100679174	Gene ID= ENSG00000172354.9 TPM= 280.22 Transcript Type= protein_coding
chr7	100676138	100679174	100676138	100679174	+	ENST00000393924.1@GNB2	ENST00000393924.1	protein_coding	100676138,100676535,100676693,100677352,100677498,100677752,100678098,100678398,100678695	100676322,100676573,100676799,100677415,100677660,100677818,100678299,100678614,100679174	Gene ID= ENSG00000172354.9 TPM= 18.68 Transcript Type= protein_coding
chr7	100688267	100690813	100688267	100690813	+	transcript4420.chr7.nnic@NA	transcript4420.chr7.nnic	NA	100688267	100690813	Gene ID= novel_gene_chr7_4421 TPM= 14.01 Transcript Type= NA
chr7	100691508	100694243	100691508	100694243	-	transcript4422.chr7.nnic@NA	transcript4422.chr7.nnic	NA	100691508	100694243	Gene ID= novel_gene_chr7_4423 TPM= 5.84 Transcript Type= NA
chr7	100706053	100707495	100706053	100707495	+	ENST00000303151.4@POP7	ENST00000303151.4	protein_coding	100706053,100706821	100706304,100707495	Gene ID= ENSG00000172336.4 TPM= 29.19 Transcript Type= protein_coding
chr7	100802568	100827525	100802568	100827525	-	transcript4454.chr7.nic@EPHB4	transcript4454.chr7.nic	protein_coding	100826979,100824203,100823644,100822271,100820141,100818520,100817192,100813919,100813652,100813095,100812747,100807365,100806420,100805501,100805166,100802568	100827525,100824273,100823931,100822667,100820296,100819889,100817357,100814021,100813716,100813208,100812994,100807580,100806569,100805694,100805321,100803590	Gene ID= ENSG00000196411.9 TPM= 68.3 Transcript Type= NA
chr7	100802565	100827499	100802565	100827499	-	ENST00000358173.7@EPHB4	ENST00000358173.7	protein_coding	100826979,100824203,100823644,100822271,100820141,100819557,100818520,100817192,100813919,100813652,100813095,100812747,100807365,100806420,100805501,100805166,100802565	100827499,100824273,100823931,100822667,100820296,100819889,100818644,100817357,100814021,100813716,100813208,100812994,100807580,100806569,100805694,100805321,100803590	Gene ID= ENSG00000196411.9 TPM= 172.22 Transcript Type= protein_coding
chr7	100852715	100867008	100852715	100867008	+	transcript4462.chr7.nic@SLC12A9	transcript4462.chr7.nic	protein_coding	100852715,100854156,100854620,100855706,100856868,100858835,100859050,100859885,100860150,100861138,100861392,100861737,100862681,100865719	100852839,100854378,100854754,100855837,100857176,100858942,100859161,100860042,100860232,100861262,100861584,100861911,100862827,100867008	Gene ID= ENSG00000146828.17 TPM= 13.08 Transcript Type= NA
chr7	100852719	100865538	100852719	100865538	+	ENST00000540482.5@SLC12A9	ENST00000540482.5	protein_coding	100852719,100854156,100854620,100855706,100856868,100858835,100859050,100859885,100860150,100861138,100861392,100861737,100862681,100865287	100852835,100854378,100854754,100855837,100857176,100858942,100859161,100860042,100860232,100861262,100861584,100861911,100862827,100865538	Gene ID= ENSG00000146828.17 TPM= 1.55 Transcript Type= protein_coding
chr7	100855441	100867009	100855441	100867009	+	ENST00000475687.5@SLC12A9	ENST00000475687.5	protein_coding	100855441,100858835,100859050,100859885,100860150,100861138,100861392,100861737,100862681,100865719	100857176,100858942,100859161,100860042,100860232,100861262,100861584,100861911,100862827,100867009	Gene ID= ENSG00000146828.17 TPM= 9.19 Transcript Type= retained_intron
chr7	100856794	100867009	100856794	100867009	+	ENST00000467972.5@SLC12A9	ENST00000467972.5	protein_coding	100856794,100859050,100859885,100860150,100861138,100861392,100861737,100862681,100865719	100858942,100859161,100860042,100860232,100861262,100861584,100861911,100862827,100867009	Gene ID= ENSG00000146828.17 TPM= 6.07 Transcript Type= retained_intron
chr7	100852753	100867008	100852753	100867008	+	ENST00000354161.7@SLC12A9	ENST00000354161.7	protein_coding	100852753,100854156,100854620,100855706,100856868,100858835,100859050,100859885,100860150,100861138,100861392,100861737,100862681,100865719	100852835,100854378,100854754,100855837,100857176,100858942,100859161,100860042,100860232,100861262,100861584,100861911,100862827,100867008	Gene ID= ENSG00000146828.17 TPM= 24.75 Transcript Type= protein_coding
chr7	100866170	100873454	100866170	100873454	+	transcript4475.chr7.nnic@TRIP6	transcript4475.chr7.nnic	protein_coding	100866170,100867363,100867861,100868108,100868495,100870370,100870574,100871543,100872624,100873172	100866251,100867606,100867988,100868233,100868866,100870463,100870743,100871721,100872744,100873454	Gene ID= ENSG00000087077.13 TPM= 96.03 Transcript Type= NA
chr7	100866643	100873454	100866643	100873454	+	transcript4478.chr7.nic@TRIP6	transcript4478.chr7.nic	protein_coding	100866643,100867911,100868108,100868495,100870370,100870574,100871543,100872624,100873172	100867606,100867988,100868233,100868866,100870463,100870743,100871721,100872744,100873454	Gene ID= ENSG00000087077.13 TPM= 11.97 Transcript Type= NA
chr7	100866179	100873454	100866179	100873454	+	transcript4479.chr7.nic@TRIP6	transcript4479.chr7.nic	protein_coding	100866179,100868108,100868495,100870370,100870574,100871543,100872624,100873172	100867988,100868233,100868866,100870463,100870743,100871721,100872744,100873454	Gene ID= ENSG00000087077.13 TPM= 11.38 Transcript Type= NA
chr7	100867361	100873454	100867361	100873454	+	transcript4491.chr7.nic@TRIP6	transcript4491.chr7.nic	protein_coding	100867361,100870370,100872624,100873172	100868866,100871721,100872744,100873454	Gene ID= ENSG00000087077.13 TPM= 4.38 Transcript Type= NA
chr7	100875076	100888664	100875076	100888664	+	transcript4440.chr7.nic@SRRT	transcript4440.chr7.nic	protein_coding	100875076,100875573,100881285,100881659,100882053,100884070,100884368,100884740,100884923,100885216,100885701,100885863,100886247,100886795,100887047,100887320,100887703,100888042,100888257,100888474	100875328,100875712,100881413,100881805,100883090,100884239,100884552,100884838,100885040,100885370,100885762,100885941,100886435,100886968,100887200,100887513,100887859,100888143,100888383,100888664	Gene ID= ENSG00000087087.19 TPM= 8.7 Transcript Type= NA
chr7	100875126	100888664	100875126	100888664	+	ENST00000614484.4@SRRT	ENST00000614484.4	protein_coding	100875126,100875573,100881285,100881659,100882053,100884070,100884368,100884740,100884923,100885216,100885701,100885863,100886247,100886795,100887047,100887320,100887703,100888042,100888257,100888474	100875328,100875712,100881413,100881805,100882241,100884239,100884552,100884838,100885040,100885370,100885762,100885941,100886435,100886968,100887200,100887513,100887859,100888143,100888383,100888664	Gene ID= ENSG00000087087.19 TPM= 84.59 Transcript Type= protein_coding
chr7	100875126	100888664	100875126	100888664	+	ENST00000618262.4@SRRT	ENST00000618262.4	protein_coding	100875126,100875573,100881285,100881659,100882053,100884070,100884368,100884740,100884923,100885213,100885701,100885863,100886247,100886795,100887047,100887320,100887703,100888054,100888257,100888474	100875328,100875712,100881413,100881805,100882241,100884239,100884552,100884838,100885040,100885370,100885762,100885941,100886435,100886968,100887200,100887513,100887859,100888143,100888383,100888664	Gene ID= ENSG00000087087.19 TPM= 26.21 Transcript Type= protein_coding
chr7	100875188	100888664	100875188	100888664	+	ENST00000611405.4@SRRT	ENST00000611405.4	protein_coding	100875188,100875573,100881285,100881659,100882053,100884070,100884368,100884740,100884923,100885213,100885701,100885863,100886247,100886795,100887047,100887320,100887703,100888042,100888257,100888474	100875328,100875712,100881413,100881805,100882241,100884239,100884552,100884838,100885040,100885370,100885762,100885941,100886435,100886968,100887200,100887513,100887859,100888143,100888383,100888664	Gene ID= ENSG00000087087.19 TPM= 23.88 Transcript Type= protein_coding
chr7	100886662	100889710	100886662	100889710	-	transcript4494.chr7.nnic@NA	transcript4494.chr7.nnic	NA	100886662	100889710	Gene ID= novel_gene_chr7_4495 TPM= 3.74 Transcript Type= NA
chr7	100888723	100889718	100888723	100889718	-	ENST00000388761.3@UFSP1	ENST00000388761.3	protein_coding	100888723	100889718	Gene ID= ENSG00000176125.4 TPM= 5.84 Transcript Type= protein_coding
chr7	100889995	100895920	100889995	100895920	-	ENST00000302913.8@ACHE	ENST00000302913.8	protein_coding	100895802,100893165,100892334,100891169,100889995	100895920,100894252,100892818,100891338,100891088	Gene ID= ENSG00000087085.13 TPM= 3.5 Transcript Type= protein_coding
chr7	100890716	100895861	100890716	100895861	-	ENST00000411582.1@ACHE	ENST00000411582.1	protein_coding	100895802,100893165,100892334,100891169,100890716	100895861,100894255,100892818,100891338,100891088	Gene ID= ENSG00000087085.13 TPM= 2.34 Transcript Type= protein_coding
chr7	101085481	101090629	101085481	101090629	+	transcript4499.chr7.nnic@TRIM56	transcript4499.chr7.nnic	protein_coding	101085481,101087006,101087312,101088769	101085571,101087168,101088465,101090629	Gene ID= ENSG00000169871.12 TPM= 2.63 Transcript Type= NA
chr7	101085461	101090629	101085461	101090629	+	transcript4502.chr7.nnic@TRIM56	transcript4502.chr7.nnic	protein_coding	101085461,101087072,101087312	101085571,101087168,101090629	Gene ID= ENSG00000169871.12 TPM= 18.97 Transcript Type= NA
chr7	101085481	101090629	101085481	101090629	+	transcript4506.chr7.nic@TRIM56	transcript4506.chr7.nic	protein_coding	101085481,101087006	101085571,101090629	Gene ID= ENSG00000169871.12 TPM= 13.14 Transcript Type= NA
chr7	101085489	101090629	101085489	101090629	+	transcript4508.chr7.nnic@TRIM56	transcript4508.chr7.nnic	protein_coding	101085489,101087312	101085571,101090629	Gene ID= ENSG00000169871.12 TPM= 17.81 Transcript Type= NA
chr7	101094823	101097898	101094823	101097898	+	transcript4509.chr7.nnic@NA	transcript4509.chr7.nnic	NA	101094823	101097898	Gene ID= novel_gene_chr7_4510 TPM= 10.51 Transcript Type= NA
chr7	101127089	101139266	101127089	101139266	+	ENST00000223095.4@SERPINE1	ENST00000223095.4	protein_coding	101127089,101128393,101130421,101131875,101133695,101135494,101135715,101137001,101137405	101127244,101128664,101130654,101132069,101133893,101135594,101135801,101137084,101139266	Gene ID= ENSG00000106366.8 TPM= 16.35 Transcript Type= protein_coding
chr7	101154397	101161277	101154397	101161277	+	ENST00000337619.9@AP1S1	ENST00000337619.9	protein_coding	101154397,101156594,101157377,101159059,101160519	101154517,101156772,101157485,101159196,101161277	Gene ID= ENSG00000106367.13 TPM= 21.02 Transcript Type= protein_coding
chr7	101205977	101217673	101205977	101217673	-	ENST00000223127.7@PLOD3	ENST00000223127.7	protein_coding	101217166,101216695,101216410,101216163,101215908,101215089,101213107,101212842,101212530,101212253,101211846,101211591,101210532,101210331,101210093,101208853,101207578,101206779,101205977	101217673,101216786,101216546,101216326,101216020,101215152,101213204,101212943,101212655,101212374,101211950,101211716,101210673,101210444,101210161,101208957,101207724,101206904,101206436	Gene ID= ENSG00000106397.11 TPM= 121.43 Transcript Type= protein_coding
chr7	101218181	101224190	101218181	101224190	+	transcript4524.chr7.nic@ZNHIT1	transcript4524.chr7.nic	protein_coding	101218181,101218319,101222604,101223477,101223673,101223937	101218217,101218485,101222774,101223556,101223842,101224190	Gene ID= ENSG00000106400.11 TPM= 2.34 Transcript Type= NA
chr7	101217668	101224190	101217668	101224190	+	ENST00000305105.2@ZNHIT1	ENST00000305105.2	protein_coding	101217668,101222604,101223477,101223673,101223937	101218217,101222774,101223556,101223842,101224190	Gene ID= ENSG00000106400.11 TPM= 88.74 Transcript Type= protein_coding
chr7	101232093	101237946	101232093	101237946	-	ENST00000611078.4@CLDN15	ENST00000611078.4	protein_coding	101237365,101236747,101234278,101232833,101232604,101232093	101237946,101236886,101234442,101232914,101232720,101232515	Gene ID= ENSG00000106404.13 TPM= 3.5 Transcript Type= protein_coding
chr7	101239612	101245085	101239612	101245085	-	ENST00000223136.4@FIS1	ENST00000223136.4	protein_coding	101244960,101244007,101240830,101240142,101239612	101245085,101244139,101240906,101240247,101239903	Gene ID= ENSG00000214253.8 TPM= 83.48 Transcript Type= protein_coding
chr7	101239607	101245048	101239607	101245048	-	ENST00000442303.1@FIS1	ENST00000442303.1	protein_coding	101244898,101240830,101240142,101239607	101245048,101240906,101240247,101239903	Gene ID= ENSG00000214253.8 TPM= 4.09 Transcript Type= protein_coding
chr7	101314753	101321764	101314753	101321764	-	ENST00000498704.6@IFT22	ENST00000498704.6	protein_coding	101321671,101318124,101316340,101314753	101321764,101318213,101316542,101315282	Gene ID= ENSG00000128581.15 TPM= 7.01 Transcript Type= protein_coding
chr7	101816776	102283957	101816776	102283957	+	transcript4547.chr7.nic@CUX1	transcript4547.chr7.nic	protein_coding	101816776,101916115,102028098,102070339,102097364,102104336,102111698,102115207,102158560,102170446,102178469,102189813,102193842,102195507,102273366,102274244,102275247,102277949,102280037,102280804,102281840,102282712,102283021	101817669,101916225,102028145,102070417,102097501,102104459,102111774,102115273,102158608,102170550,102178657,102189871,102193890,102195603,102273493,102274310,102275359,102278065,102280120,102280860,102281920,102282776,102283957	Gene ID= ENSG00000257923.9 TPM= 12.84 Transcript Type= NA
chr7	102204524	102250074	102204524	102250074	+	transcript4550.chr7.nnic@CUX1	transcript4550.chr7.nnic	protein_coding	102204524,102227398,102234052,102239320,102248412	102204539,102227669,102234240,102239584,102250074	Gene ID= ENSG00000257923.9 TPM= 23.35 Transcript Type= NA
chr7	101816009	102283957	101816009	102283957	+	ENST00000547394.6@CUX1	ENST00000547394.6	protein_coding	101816009,101916115,102070339,102097364,102104336,102111698,102115207,102158560,102170446,102178469,102189813,102193842,102195507,102273366,102274244,102275247,102277949,102280037,102280804,102281840,102282712,102283021	101816093,101916225,102070417,102097501,102104459,102111774,102115273,102158608,102170550,102178657,102189871,102193890,102195603,102273493,102274310,102275359,102278065,102280120,102280860,102281920,102282776,102283957	Gene ID= ENSG00000257923.9 TPM= 5.84 Transcript Type= protein_coding
chr7	102285155	102321711	102285155	102321711	+	ENST00000536178.3@SH2B2	ENST00000536178.3	protein_coding	102285155,102300522,102306721,102308815,102314336,102314512,102317187,102320331,102321299	102285258,102301279,102306822,102308906,102314427,102314682,102317395,102320502,102321711	Gene ID= ENSG00000160999.10 TPM= 22.18 Transcript Type= protein_coding
chr7	102363862	102426666	102363862	102426666	+	transcript4561.chr7.nic@PRKRIP1	transcript4561.chr7.nic	protein_coding	102363862,102365974,102375823,102376212,102395977,102397620,102399548,102404598,102407434,102425014	102364411,102366076,102375949,102376322,102396537,102397698,102399648,102404683,102407498,102426666	Gene ID= ENSG00000128563.13 TPM= 2.34 Transcript Type= NA
chr7	102363870	102397416	102363870	102397416	+	transcript4574.chr7.nic@PRKRIP1	transcript4574.chr7.nic	protein_coding	102363870,102365955,102375823,102376212,102395977	102364411,102366076,102375949,102376322,102397416	Gene ID= ENSG00000128563.13 TPM= 3.5 Transcript Type= NA
chr7	102363894	102425446	102363894	102425446	+	ENST00000469763.5@PRKRIP1	ENST00000469763.5	protein_coding	102363894,102365955,102375823,102376212,102397620,102399548,102404598,102407434,102425014	102364411,102366076,102375949,102376322,102397698,102399648,102404683,102407498,102425446	Gene ID= ENSG00000128563.13 TPM= 1.17 Transcript Type= processed_transcript
chr7	102363895	102425449	102363895	102425449	+	ENST00000482549.5@PRKRIP1	ENST00000482549.5	protein_coding	102363895,102365974,102375823,102376212,102397620,102399548,102404598,102407434,102425014	102364411,102366076,102375949,102376322,102397698,102399648,102404683,102407498,102425449	Gene ID= ENSG00000128563.13 TPM= 2.34 Transcript Type= processed_transcript
chr7	102363897	102426676	102363897	102426676	+	ENST00000496391.5@PRKRIP1	ENST00000496391.5	protein_coding	102363897,102365955,102375823,102376212,102395977,102397620,102399548,102404598,102407434,102425014	102364411,102366076,102375949,102376322,102396537,102397698,102399648,102404683,102407498,102426676	Gene ID= ENSG00000128563.13 TPM= 7.01 Transcript Type= protein_coding
chr7	102396363	102426666	102396363	102426666	+	ENST00000397912.3@PRKRIP1	ENST00000397912.3	protein_coding	102396363,102397620,102399548,102404598,102407434,102425014	102396537,102397698,102399648,102404683,102407498,102426666	Gene ID= ENSG00000128563.13 TPM= 11.68 Transcript Type= protein_coding
chr7	102380911	102383776	102380911	102383776	-	transcript4576.chr7.nnic@NA	transcript4576.chr7.nnic	NA	102380911	102383776	Gene ID= novel_gene_chr7_4577 TPM= 7.01 Transcript Type= NA
chr7	102433530	102456821	102433530	102456821	+	ENST00000356387.6@ORAI2	ENST00000356387.6	protein_coding	102433530,102436202,102438944,102446513	102433661,102436333,102439181,102456821	Gene ID= ENSG00000160991.15 TPM= 2.34 Transcript Type= protein_coding
chr7	102433530	102456821	102433530	102456821	+	ENST00000611770.4@ORAI2	ENST00000611770.4	protein_coding	102433530,102438944,102446513	102433661,102439181,102456821	Gene ID= ENSG00000160991.15 TPM= 4.67 Transcript Type= protein_coding
chr7	102456238	102464876	102456238	102464876	-	ENST00000292566.3@ALKBH4	ENST00000292566.3	protein_coding	102464714,102459604,102456238	102464876,102459801,102457981	Gene ID= ENSG00000160993.3 TPM= 8.17 Transcript Type= protein_coding
chr7	102456834	102464863	102456834	102464863	-	ENST00000490528.1@ALKBH4	ENST00000490528.1	protein_coding	102464714,102459604,102456834	102464863,102459710,102457981	Gene ID= ENSG00000160993.3 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr7	102464929	102473168	102464929	102473168	+	ENST00000292616.9@LRWD1	ENST00000292616.9	protein_coding	102464929,102465817,102466154,102467339,102467719,102468062,102468263,102468554,102468855,102469574,102469742,102472218,102472454,102472692,102472909	102465160,102466051,102466270,102467479,102467823,102468187,102468377,102468654,102469062,102469646,102469882,102472309,102472609,102472804,102473168	Gene ID= ENSG00000161036.12 TPM= 26.85 Transcript Type= protein_coding
chr7	102465596	102473168	102465596	102473168	+	transcript4604.chr7.nnic@LRWD1	transcript4604.chr7.nnic	protein_coding	102465596,102465817,102466154,102467339,102467719,102468062,102468263,102468554,102468855,102469574,102469742,102472218,102472454,102472692,102472909	102465681,102466051,102466270,102467479,102467823,102468187,102468377,102468654,102469062,102469646,102469882,102472309,102472609,102472804,102473168	Gene ID= ENSG00000161036.12 TPM= 8.17 Transcript Type= NA
chr7	102473451	102478933	102473451	102478933	-	transcript4690.chr7.nic@POLR2J	transcript4690.chr7.nic	protein_coding	102478808,102476181,102473451	102478933,102476270,102474535	Gene ID= ENSG00000005075.15 TPM= 10.51 Transcript Type= NA
chr7	102479977	102480644	102479977	102480644	-	transcript4710.chr7.nnic@NA	transcript4710.chr7.nnic	NA	102479977	102480644	Gene ID= novel_gene_chr7_4711 TPM= 3.5 Transcript Type= NA
chr7	102483144	102517781	102483144	102517781	-	ENST00000465829.5@RASA4B	ENST00000465829.5	protein_coding	102517646,102511925,102510179,102509599,102506695,102503163,102501096,102500699,102496847,102496469,102496140,102495278,102494881,102494538,102493825,102493116,102490986,102488463,102485039,102483825,102483144	102517781,102511981,102510292,102509660,102506824,102503244,102501227,102500793,102496964,102496619,102496204,102495390,102495073,102494675,102493969,102493285,102491123,102488598,102485159,102483889,102483713	Gene ID= ENSG00000170667.14 TPM= 37.36 Transcript Type= protein_coding
chr7	102537920	102572649	102537920	102572649	-	ENST00000486319.5@POLR2J3	ENST00000486319.5	protein_coding	102572472,102569835,102566997,102541501,102541093,102540015,102539606,102537920	102572649,102569924,102567083,102541662,102541303,102540091,102539726,102538525	Gene ID= ENSG00000168255.19 TPM= 85.82 Transcript Type= nonsense_mediated_decay
chr7	102537919	102543050	102537919	102543050	-	transcript4651.chr7.nic@POLR2J3	transcript4651.chr7.nic	protein_coding	102541501,102541093,102540015,102539606,102537919	102543050,102541303,102540091,102539726,102538525	Gene ID= ENSG00000168255.19 TPM= 15.18 Transcript Type= NA
chr7	102537919	102572539	102537919	102572539	-	ENST00000379340.9@POLR2J3	ENST00000379340.9	protein_coding	102572472,102569835,102568010,102566997,102541501,102541093,102540015,102539606,102537919	102572539,102569924,102568184,102567083,102541662,102541303,102540091,102539726,102538525	Gene ID= ENSG00000168255.19 TPM= 8.17 Transcript Type= nonsense_mediated_decay
chr7	102537918	102572567	102537918	102572567	-	ENST00000489144.5@POLR2J3	ENST00000489144.5	protein_coding	102572472,102569835,102566997,102541501,102541093,102540015,102539606,102537918	102572567,102569924,102568184,102541662,102541303,102540091,102539726,102538525	Gene ID= ENSG00000168255.19 TPM= 1.75 Transcript Type= nonsense_mediated_decay
chr7	102582325	102616756	102582325	102616756	-	ENST00000449970.6@RASA4	ENST00000449970.6	protein_coding	102616625,102611086,102609341,102608761,102605858,102602324,102600257,102599860,102596012,102595634,102595305,102594447,102594050,102593707,102592994,102592285,102587635,102584218,102583004,102582325	102616756,102611142,102609454,102608822,102605987,102602405,102600388,102599954,102596129,102595784,102595369,102594559,102594242,102593844,102593138,102592454,102587770,102584338,102583068,102582892	Gene ID= ENSG00000105808.17 TPM= 14.59 Transcript Type= protein_coding
chr7	102582323	102611480	102582323	102611480	-	transcript4597.chr7.nic@RASA4	transcript4597.chr7.nic	protein_coding	102611086,102609341,102608761,102605858,102602324,102600257,102599860,102596012,102595634,102595305,102594447,102594050,102593707,102592994,102592285,102587635,102584218,102583004,102582323	102611480,102609454,102608822,102605987,102602405,102600388,102599954,102596129,102595784,102595369,102594559,102594242,102593844,102593138,102592454,102587770,102584338,102583068,102582892	Gene ID= ENSG00000105808.17 TPM= 15.76 Transcript Type= NA
chr7	102576190	102578315	102576190	102578315	+	transcript4708.chr7.nnic@NA	transcript4708.chr7.nnic	NA	102576190	102578315	Gene ID= novel_gene_chr7_4709 TPM= 2.34 Transcript Type= NA
chr7	102582323	102671788	102582323	102671788	-	transcript4581.chr7.nnic@AC105052.1	transcript4581.chr7.nnic	protein_coding	102671552,102668915,102666077,102640612,102640204,102639123,102638714,102611086,102609341,102608761,102605858,102602324,102600257,102599860,102596012,102595634,102595305,102594447,102594050,102593707,102592994,102592285,102590159,102587635,102584218,102583004,102582323	102671788,102669004,102666163,102640773,102640414,102639199,102638834,102611142,102609454,102608822,102605987,102602405,102600388,102599954,102596129,102595784,102595369,102594559,102594242,102593844,102593138,102592454,102590296,102587770,102584338,102583068,102582892	Gene ID= ENSG00000205236.6 TPM= 24.52 Transcript Type= NA
chr7	102637025	102642791	102637025	102642791	-	ENST00000340457.8@UPK3BL1	ENST00000340457.8	protein_coding	102642630,102640612,102640204,102639123,102638714,102637025	102642791,102640773,102640414,102639199,102638834,102637633	Gene ID= ENSG00000267368.1 TPM= 21.6 Transcript Type= protein_coding
chr7	102637025	102671648	102637025	102671648	-	transcript4620.chr7.nnic@POLR2J2	transcript4620.chr7.nnic	protein_coding	102671552,102668915,102666077,102644394,102643799,102642630,102640612,102640204,102639123,102638714,102637025	102671648,102669004,102666163,102644511,102643869,102642807,102640773,102640414,102639199,102638834,102637633	Gene ID= ENSG00000267645.5 TPM= 4.09 Transcript Type= NA
chr7	102637025	102671659	102637025	102671659	-	transcript4630.chr7.nnic@POLR2J2	transcript4630.chr7.nnic	protein_coding	102671552,102668915,102667090,102666077,102665662,102640612,102640204,102639123,102638714,102637025	102671659,102669004,102667264,102666163,102665816,102640773,102640414,102639199,102638834,102637633	Gene ID= ENSG00000267645.5 TPM= 6.22 Transcript Type= NA
chr7	102637025	102671788	102637025	102671788	-	transcript4633.chr7.nnic@POLR2J2	transcript4633.chr7.nnic	protein_coding	102671552,102668915,102666077,102665662,102640612,102640204,102639123,102638714,102637025	102671788,102669004,102666163,102665816,102640773,102640414,102639199,102638834,102637633	Gene ID= ENSG00000267645.5 TPM= 4.67 Transcript Type= NA
chr7	102637025	102671700	102637025	102671700	-	transcript4634.chr7.nnic@POLR2J2	transcript4634.chr7.nnic	protein_coding	102671523,102668915,102667090,102666077,102640612,102640204,102639123,102638714,102637025	102671700,102669004,102667264,102666163,102640773,102640414,102639199,102638834,102637633	Gene ID= ENSG00000267645.5 TPM= 4.47 Transcript Type= NA
chr7	102637049	102671641	102637049	102671641	-	ENST00000476151.5@POLR2J2	ENST00000476151.5	protein_coding	102671552,102668915,102667090,102666077,102640612,102640204,102639123,102638714,102637049	102671641,102669004,102667264,102666163,102640773,102640414,102639199,102638834,102637633	Gene ID= ENSG00000267645.5 TPM= 23.15 Transcript Type= nonsense_mediated_decay
chr7	102748971	102809225	102748971	102809225	+	ENST00000442873.5@FAM185A	ENST00000442873.5	protein_coding	102748971,102751692,102757854,102761273,102772409,102777253,102787335,102808290	102749636,102751801,102757946,102761411,102772450,102777348,102787469,102809225	Gene ID= ENSG00000222011.8 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr7	103074881	103099764	103074881	103099764	+	ENST00000323716.7@ARMC10	ENST00000323716.7	protein_coding	103074881,103075777,103083682,103086630,103092477,103097277,103098299	103075411,103075881,103083830,103086764,103092653,103097348,103099764	Gene ID= ENSG00000170632.13 TPM= 11.68 Transcript Type= protein_coding
chr7	103074881	103099758	103074881	103099758	+	ENST00000441711.6@ARMC10	ENST00000441711.6	protein_coding	103074881,103083682,103086630,103092477,103097277,103098299	103075411,103083830,103086764,103092653,103097348,103099758	Gene ID= ENSG00000170632.13 TPM= 50.21 Transcript Type= protein_coding
chr7	103074881	103099751	103074881	103099751	+	ENST00000428183.6@ARMC10	ENST00000428183.6	protein_coding	103074881,103075777,103083682,103086630,103097277,103098299	103075411,103075881,103083830,103086764,103097348,103099751	Gene ID= ENSG00000170632.13 TPM= 3.5 Transcript Type= protein_coding
chr7	103074881	103099749	103074881	103099749	+	ENST00000425331.5@ARMC10	ENST00000425331.5	protein_coding	103074881,103083682,103086630,103092477,103098299	103075411,103083830,103086764,103092653,103099749	Gene ID= ENSG00000170632.13 TPM= 2.34 Transcript Type= protein_coding
chr7	103074881	103099758	103074881	103099758	+	ENST00000454559.5@ARMC10	ENST00000454559.5	protein_coding	103074881,103083682,103086630,103097277,103098299	103075411,103083830,103086764,103097348,103099758	Gene ID= ENSG00000170632.13 TPM= 18.68 Transcript Type= protein_coding
chr7	103074881	103099749	103074881	103099749	+	ENST00000541300.5@ARMC10	ENST00000541300.5	protein_coding	103074881,103083682,103086630,103098299	103075411,103083830,103086764,103099749	Gene ID= ENSG00000170632.13 TPM= 1.17 Transcript Type= protein_coding
chr7	103102510	103149073	103102510	103149073	-	ENST00000465647.5@NAPEPLD	ENST00000465647.5	protein_coding	103148811,103128483,103119577,103115060,103102510	103149073,103128792,103120223,103115174,103103554	Gene ID= ENSG00000161048.11 TPM= 5.84 Transcript Type= protein_coding
chr7	103297422	103313235	103297422	103313235	+	ENST00000249269.8@PMPCB	ENST00000249269.8	protein_coding	103297422,103298568,103299443,103300178,103303842,103304411,103307596,103308952,103310315,103311643,103311808,103312056,103312207	103297558,103298708,103299529,103300307,103304040,103304490,103307708,103309095,103310475,103311728,103311896,103312131,103313235	Gene ID= ENSG00000105819.13 TPM= 2.34 Transcript Type= protein_coding
chr7	103297457	103312312	103297457	103312312	+	ENST00000453466.1@PMPCB	ENST00000453466.1	protein_coding	103297457,103298568,103299443,103300187,103303842,103304411,103307596,103308952,103310315,103311643,103311808,103312056,103312207	103297558,103298708,103299533,103300307,103304040,103304490,103307708,103309095,103310475,103311728,103311896,103312131,103312312	Gene ID= ENSG00000105819.13 TPM= 17.51 Transcript Type= nonsense_mediated_decay
chr7	103312519	103344873	103312519	103344873	-	ENST00000379263.7@DNAJC2	ENST00000379263.7	protein_coding	103344559,103341764,103337736,103327656,103326543,103324482,103323598,103322703,103322511,103321932,103319756,103319609,103316830,103315988,103315764,103312947,103312519	103344873,103341954,103337811,103327754,103326684,103324562,103323663,103322794,103322632,103322081,103319844,103319678,103317014,103316088,103315871,103313101,103312643	Gene ID= ENSG00000105821.14 TPM= 15.18 Transcript Type= protein_coding
chr7	103344914	103369395	103344914	103369395	+	ENST00000435765.5@PSMC2	ENST00000435765.5	protein_coding	103344914,103347524,103353921,103354868,103355694,103361957,103362686,103363344,103364143,103366076,103367413,103367713,103367897	103345136,103347781,103353958,103354949,103355793,103362088,103362758,103363439,103364307,103366163,103367615,103367809,103369395	Gene ID= ENSG00000161057.11 TPM= 67.72 Transcript Type= protein_coding
chr7	103471784	103989516	103471784	103989516	-	ENST00000343529.9@RELN	ENST00000343529.9	protein_coding	103989131,103917075,103833537,103776557,103753182,103749426,103728111,103723140,103700910,103697853,103682116,103661376,103654093,103652551,103651661,103650274,103640543,103636235,103635425,103629940,103611611,103610695,103604346,103603304,103596456,103594321,103593682,103589596,103575548,103574092,103572184,103566601,103566224,103565278,103561813,103561532,103557965,103556977,103553660,103553461,103551067,103545124,103542731,103540197,103539078,103535316,103523391,103522022,103519323,103515185,103510851,103503016,103500745,103498077,103497820,103496526,103495723,103491953,103490668,103489742,103486197,103483653,103482873,103471784	103989516,103917185,103833672,103776627,103753214,103749504,103728207,103723191,103701006,103698093,103682261,103661527,103654205,103652759,103651789,103650383,103640609,103636468,103635586,103630176,103611803,103610807,103604483,103603490,103596661,103594492,103593882,103589828,103575705,103574299,103572260,103566759,103566412,103565551,103561953,103561709,103558049,103557159,103553831,103553563,103551296,103545344,103542878,103540455,103539327,103535484,103523531,103522199,103519516,103515441,103511005,103503230,103500922,103498252,103497926,103496768,103495898,103492026,103490829,103489899,103486416,103483850,103482971,103472908	Gene ID= ENSG00000189056.13 TPM= 3.5 Transcript Type= protein_coding
chr7	104126341	104208047	104126341	104208047	-	ENST00000297431.8@ORC5	ENST00000297431.8	protein_coding	104207833,104204142,104200758,104197725,104195143,104188251,104184123,104183943,104168473,104166772,104165235,104161072,104136781,104126341	104208047,104204234,104200958,104197799,104195254,104188381,104184171,104184033,104168525,104166884,104165282,104161182,104136893,104126893	Gene ID= ENSG00000164815.10 TPM= 17.51 Transcript Type= protein_coding
chr7	104126341	104208026	104126341	104208026	-	transcript4778.chr7.nic@ORC5	transcript4778.chr7.nic	protein_coding	104207833,104204142,104200758,104197725,104195143,104188251,104184123,104183943,104166772,104165235,104161072,104136781,104126341	104208026,104204234,104200958,104197799,104195254,104188381,104184171,104184033,104168525,104165282,104161182,104136893,104126893	Gene ID= ENSG00000164815.10 TPM= 2.34 Transcript Type= NA
chr7	104837619	104839027	104837619	104839027	-	transcript4783.chr7.nnic@NA	transcript4783.chr7.nnic	NA	104837619	104839027	Gene ID= novel_gene_chr7_4784 TPM= 2.34 Transcript Type= NA
chr7	104894628	104926679	104894628	104926679	-	transcript4786.chr7.nnic@LHFPL3-AS2	transcript4786.chr7.nnic	processed_transcript	104926453,104920385,104919477,104917560,104915706,104911916,104894628	104926679,104920425,104919594,104917980,104915827,104912165,104896064	Gene ID= ENSG00000225329.3 TPM= 3.5 Transcript Type= NA
chr7	104894628	104926679	104894628	104926679	-	transcript4793.chr7.nnic@LHFPL3-AS2	transcript4793.chr7.nnic	processed_transcript	104926453,104920385,104917560,104915706,104911916,104894628	104926679,104920425,104917980,104915827,104912165,104896064	Gene ID= ENSG00000225329.3 TPM= 2.34 Transcript Type= NA
chr7	104916989	104926679	104916989	104926679	-	transcript4805.chr7.nic@LHFPL3-AS2	transcript4805.chr7.nic	processed_transcript	104926453,104920385,104916989	104926679,104920425,104917980	Gene ID= ENSG00000225329.3 TPM= 3.5 Transcript Type= NA
chr7	104914529	104916397	104914529	104916397	+	transcript4810.chr7.nnic@NA	transcript4810.chr7.nnic	NA	104914529	104916397	Gene ID= novel_gene_chr7_4811 TPM= 2.34 Transcript Type= NA
chr7	105002136	105005085	105002136	105005085	+	transcript4833.chr7.nnic@NA	transcript4833.chr7.nnic	NA	105002136	105005085	Gene ID= novel_gene_chr7_4834 TPM= 3.5 Transcript Type= NA
chr7	105011711	105013599	105011711	105013599	-	transcript4839.chr7.nnic@NA	transcript4839.chr7.nnic	NA	105011711	105013599	Gene ID= novel_gene_chr7_4840 TPM= 2.34 Transcript Type= NA
chr7	105013282	105014099	105013282	105014099	-	transcript4835.chr7.nnic@NA	transcript4835.chr7.nnic	NA	105013282	105014099	Gene ID= novel_gene_chr7_4836 TPM= 11.68 Transcript Type= NA
chr7	105014153	105102649	105014153	105102649	+	transcript4814.chr7.nic@KMT2E	transcript4814.chr7.nic	protein_coding	105014153,105040839,105062164,105063351,105066727,105073619,105074643,105076043,105076963,105077303,105078846,105081688,105090009,105091216,105101425,105101886	105014535,105041023,105062278,105063580,105066807,105073677,105074815,105076081,105077193,105077433,105078963,105081797,105090273,105091314,105101589,105102649	Gene ID= ENSG00000005483.20 TPM= 2.72 Transcript Type= NA
chr7	105013755	105090132	105013755	105090132	+	transcript4816.chr7.nic@KMT2E	transcript4816.chr7.nic	protein_coding	105013755,105038126,105040839,105062164,105063351,105066727,105073619,105074643,105076043,105076963,105077303,105078846,105081688,105090009	105014535,105038199,105041023,105062278,105063580,105066807,105073677,105074815,105076081,105077193,105077433,105078963,105081797,105090132	Gene ID= ENSG00000005483.20 TPM= 9.34 Transcript Type= NA
chr7	105014153	105091609	105014153	105091609	+	transcript4819.chr7.nic@KMT2E	transcript4819.chr7.nic	protein_coding	105014153,105040839,105062164,105063351,105066727,105073619,105074643,105076043,105076963,105077303,105078846,105081688,105090009,105091216	105014535,105041023,105062278,105063580,105066807,105073677,105074815,105076081,105077193,105077433,105078963,105081797,105090273,105091609	Gene ID= ENSG00000005483.20 TPM= 2.72 Transcript Type= NA
chr7	105014208	105074777	105014208	105074777	+	ENST00000495267.5@KMT2E	ENST00000495267.5	protein_coding	105014208,105040839,105062164,105063351,105066727,105073619,105074643	105014535,105041023,105062278,105063580,105066807,105073677,105074777	Gene ID= ENSG00000005483.20 TPM= 2.34 Transcript Type= protein_coding
chr7	105073052	105076909	105073052	105076909	-	transcript4837.chr7.nnic@NA	transcript4837.chr7.nnic	NA	105073052	105076909	Gene ID= novel_gene_chr7_4838 TPM= 3.5 Transcript Type= NA
chr7	105115731	105388957	105115731	105388957	-	transcript4850.chr7.nic@SRPK2	transcript4850.chr7.nic	protein_coding	105388791,105388648,105203628,105169157,105168008,105167377,105160507,105146493,105145283,105143084,105142008,105133004,105132791,105126993,105125782,105115731	105388957,105388702,105203785,105169265,105168095,105167464,105160613,105146658,105145308,105143330,105142490,105133104,105132898,105127062,105125874,105118022	Gene ID= ENSG00000135250.16 TPM= 2.34 Transcript Type= NA
chr7	105305500	105388895	105305500	105388895	-	transcript4864.chr7.nic@SRPK2	transcript4864.chr7.nic	protein_coding	105388791,105388648,105305500	105388895,105388702,105306571	Gene ID= ENSG00000135250.16 TPM= 2.34 Transcript Type= NA
chr7	105387504	105388897	105387504	105388897	-	transcript4869.chr7.nic@SRPK2	transcript4869.chr7.nic	protein_coding	105388791,105387504	105388897,105388702	Gene ID= ENSG00000135250.16 TPM= 3.5 Transcript Type= NA
chr7	105116376	105388894	105116376	105388894	-	ENST00000393651.7@SRPK2	ENST00000393651.7	protein_coding	105388791,105388648,105203628,105169157,105168008,105167377,105160507,105146493,105145283,105143084,105142008,105133004,105132791,105126993,105126248,105116376	105388894,105388702,105203785,105169265,105168095,105167464,105160613,105146658,105145308,105143330,105142490,105133104,105132898,105127062,105126340,105118022	Gene ID= ENSG00000135250.16 TPM= 15.18 Transcript Type= protein_coding
chr7	105116377	105269015	105116377	105269015	-	ENST00000357311.7@SRPK2	ENST00000357311.7	protein_coding	105268806,105203628,105169157,105168008,105167377,105160507,105146493,105145283,105143084,105142008,105133004,105132791,105126993,105126248,105116377	105269015,105203785,105169265,105168095,105167464,105160613,105146658,105145308,105143330,105142490,105133104,105132898,105127062,105126340,105118022	Gene ID= ENSG00000135250.16 TPM= 2.34 Transcript Type= protein_coding
chr7	105197720	105201647	105197720	105201647	+	transcript4870.chr7.nnic@NA	transcript4870.chr7.nnic	NA	105197720	105201647	Gene ID= novel_gene_chr7_4871 TPM= 3.5 Transcript Type= NA
chr7	105456511	105522267	105456511	105522267	-	transcript4877.chr7.nnic@PUS7	transcript4877.chr7.nnic	protein_coding	105522052,105508115,105506189,105505955,105502420,105495142,105491540,105482312,105481052,105472132,105465313,105462621,105459168,105456511	105522267,105508544,105506273,105506056,105502564,105495253,105491617,105482440,105481177,105472193,105465414,105462750,105459259,105457926	Gene ID= ENSG00000091127.13 TPM= 2.34 Transcript Type= NA
chr7	105456511	105522258	105456511	105522258	-	ENST00000356362.6@PUS7	ENST00000356362.6	protein_coding	105522052,105508115,105506189,105505955,105502420,105495142,105491540,105482312,105481052,105472132,105470688,105468337,105465313,105462621,105459168,105456511	105522258,105508520,105506273,105506056,105502564,105495253,105491617,105482440,105481177,105472193,105470848,105468463,105465414,105462750,105459259,105457926	Gene ID= ENSG00000091127.13 TPM= 18.68 Transcript Type= protein_coding
chr7	105457659	105522258	105457659	105522258	-	ENST00000469408.5@PUS7	ENST00000469408.5	protein_coding	105522052,105508115,105506189,105505955,105502420,105495142,105491540,105482312,105481052,105472132,105470688,105468337,105465313,105462621,105459168,105457659	105522258,105508544,105506273,105506056,105502564,105495253,105491617,105482440,105481177,105472193,105470848,105468463,105465414,105462750,105459259,105457926	Gene ID= ENSG00000091127.13 TPM= 1.17 Transcript Type= protein_coding
chr7	105532085	105567677	105532085	105567677	+	ENST00000257700.6@RINT1	ENST00000257700.6	protein_coding	105532085,105532824,105536565,105542408,105546910,105547184,105548554,105550055,105550261,105551570,105555028,105563733,105565277,105565530,105567119	105532357,105532869,105536749,105542649,105547083,105547333,105548710,105550165,105550486,105551707,105555227,105563947,105565457,105565648,105567677	Gene ID= ENSG00000135249.7 TPM= 17.51 Transcript Type= protein_coding
chr7	105760373	105876582	105760373	105876582	-	ENST00000318724.8@ATXN7L1	ENST00000318724.8	protein_coding	105876378,105875812,105788604,105760373	105876582,105875880,105788708,105761463	Gene ID= ENSG00000146776.14 TPM= 1.17 Transcript Type= protein_coding
chr7	106090503	106112331	106090503	106112331	-	ENST00000455385.6@SYPL1	ENST00000455385.6	protein_coding	106112140,106099158,106097690,106092949,106090503	106112331,106099282,106097897,106093137,106091939	Gene ID= ENSG00000008282.8 TPM= 287.23 Transcript Type= protein_coding
chr7	106248285	106285192	106248285	106285192	-	ENST00000222553.7@NAMPT	ENST00000222553.7	protein_coding	106284828,106277023,106274946,106272530,106269154,106268464,106263392,106261588,106254364,106253017,106248285	106285192,106277179,106275049,106272658,106269312,106268600,106263617,106261707,106254504,106253151,106251193	Gene ID= ENSG00000105835.11 TPM= 54.29 Transcript Type= protein_coding
chr7	106656765	106660996	106656765	106660996	-	ENST00000523505.1@CCDC71L	ENST00000523505.1	protein_coding	106656765	106660996	Gene ID= ENSG00000253276.2 TPM= 10.51 Transcript Type= protein_coding
chr7	106865278	106905821	106865278	106905821	+	ENST00000440650.6@PIK3CG	ENST00000440650.6	protein_coding	106865278,106867550,106872537,106872713,106874700,106879519,106882117,106883033,106884155,106886135,106905109	106865350,106869556,106872602,106872938,106874803,106879665,106882207,106883163,106884266,106886292,106905821	Gene ID= ENSG00000105851.10 TPM= 1.75 Transcript Type= protein_coding
chr7	106865296	106907132	106865296	106907132	+	ENST00000496166.5@PIK3CG	ENST00000496166.5	protein_coding	106865296,106867550,106872537,106872713,106874700,106879519,106882117,106883033,106884155,106886135,106905109	106865426,106869556,106872602,106872938,106874803,106879665,106882207,106883163,106884266,106886292,106907132	Gene ID= ENSG00000105851.10 TPM= 2.92 Transcript Type= protein_coding
chr7	107168961	107202508	107168961	107202508	+	ENST00000468410.5@HBP1	ENST00000468410.5	protein_coding	107168961,107179879,107182373,107185801,107186361,107186569,107189292,107190173,107195834,107200160,107201414	107169027,107180062,107182601,107185942,107186472,107186681,107189448,107190317,107196151,107200301,107202508	Gene ID= ENSG00000105856.13 TPM= 19.85 Transcript Type= protein_coding
chr7	107168981	107202522	107168981	107202522	+	transcript4935.chr7.nic@HBP1	transcript4935.chr7.nic	protein_coding	107168981,107179879,107182373,107185801,107186361,107186569,107189292,107190173,107195834,107200160	107169027,107180062,107182601,107185942,107186472,107186681,107189448,107190317,107196151,107202522	Gene ID= ENSG00000105856.13 TPM= 3.5 Transcript Type= NA
chr7	107168981	107202508	107168981	107202508	+	transcript4936.chr7.nnic@HBP1	transcript4936.chr7.nnic	protein_coding	107168981,107179879,107182373,107185801,107186361,107186569,107190173,107195834,107200160,107201414	107169027,107180062,107182601,107185942,107186472,107186681,107190317,107196151,107200301,107202508	Gene ID= ENSG00000105856.13 TPM= 2.34 Transcript Type= NA
chr7	107169000	107202522	107169000	107202522	+	transcript4938.chr7.nic@HBP1	transcript4938.chr7.nic	protein_coding	107169000,107179879,107182373,107185801,107186361,107186569,107189292,107190173,107195834,107200160	107169185,107180062,107182601,107185942,107186472,107186681,107189448,107190317,107196151,107202522	Gene ID= ENSG00000105856.13 TPM= 3.5 Transcript Type= NA
chr7	107169015	107202529	107169015	107202529	+	ENST00000222574.8@HBP1	ENST00000222574.8	protein_coding	107169015,107179879,107182373,107185801,107186361,107186569,107189292,107190173,107195834,107200160,107201414	107169185,107180062,107182601,107185942,107186472,107186681,107189448,107190317,107196151,107200301,107202529	Gene ID= ENSG00000105856.13 TPM= 28.02 Transcript Type= protein_coding
chr7	107202564	107564514	107202564	107564514	-	ENST00000297135.7@COG5	ENST00000297135.7	protein_coding	107563803,107557976,107554285,107548278,107548111,107527237,107412502,107372595,107362308,107362033,107324440,107298142,107283571,107281300,107258273,107256732,107248396,107236450,107230615,107211099,107210526,107202564	107564514,107558115,107554342,107548332,107548180,107527357,107412632,107372760,107362420,107362110,107324521,107298346,107283732,107281399,107258383,107256794,107248499,107236687,107230691,107211225,107210605,107203630	Gene ID= ENSG00000164597.13 TPM= 5.84 Transcript Type= protein_coding
chr7	107563958	107578464	107563958	107578464	+	ENST00000265720.7@DUS4L	ENST00000265720.7	protein_coding	107563958,107564588,107567050,107571145,107573704,107575188,107576366,107577313	107564209,107564676,107567186,107571266,107573821,107575310,107576592,107578464	Gene ID= ENSG00000105865.10 TPM= 2.34 Transcript Type= protein_coding
chr7	107580247	107616565	107580247	107616565	+	transcript4954.chr7.nic@BCAP29	transcript4954.chr7.nic	protein_coding	107580247,107580759,107583882,107593955,107595867,107600397,107613332,107616261	107580301,107580864,107583982,107594105,107596002,107600505,107613432,107616565	Gene ID= ENSG00000075790.10 TPM= 3.5 Transcript Type= NA
chr7	107579963	107621870	107579963	107621870	+	transcript4961.chr7.nic@BCAP29	transcript4961.chr7.nic	protein_coding	107579963,107580759,107583882,107593955,107595867,107600397,107613332,107621630	107580301,107580864,107583982,107594105,107596002,107600505,107613432,107621870	Gene ID= ENSG00000075790.10 TPM= 10.51 Transcript Type= NA
chr7	107580203	107630720	107580203	107630720	+	transcript4963.chr7.nnic@BCAP29	transcript4963.chr7.nnic	protein_coding	107580203,107580759,107583882,107593955,107595867,107600397,107613332,107628608	107580301,107580864,107583982,107594105,107596002,107600505,107613432,107630720	Gene ID= ENSG00000075790.10 TPM= 3.5 Transcript Type= NA
chr7	107579963	107630718	107579963	107630718	+	transcript4964.chr7.nic@BCAP29	transcript4964.chr7.nic	protein_coding	107579963,107580759,107583882,107593955,107595867,107600397,107613332,107628822	107580301,107580864,107583982,107594105,107596002,107600505,107613432,107630718	Gene ID= ENSG00000075790.10 TPM= 3.5 Transcript Type= NA
chr7	107602966	107607579	107602966	107607579	-	transcript4978.chr7.nnic@NA	transcript4978.chr7.nnic	NA	107602966	107607579	Gene ID= novel_gene_chr7_4979 TPM= 18.68 Transcript Type= NA
chr7	107743697	107761667	107743697	107761667	+	ENST00000440859.7@CBLL1	ENST00000440859.7	protein_coding	107743697,107748880,107753411,107753895,107755418,107758143	107744176,107749047,107753511,107753978,107755491,107761667	Gene ID= ENSG00000105879.11 TPM= 8.17 Transcript Type= protein_coding
chr7	107744142	107759686	107744142	107759686	+	ENST00000222597.6@CBLL1	ENST00000222597.6	protein_coding	107744142,107748880,107753414,107753895,107755418,107758143	107744176,107749047,107753511,107753978,107755491,107759686	Gene ID= ENSG00000105879.11 TPM= 1.17 Transcript Type= protein_coding
chr7	107890970	107921203	107890970	107921203	+	ENST00000205402.9@DLD	ENST00000205402.9	protein_coding	107890970,107893200,107901738,107902325,107903478,107904958,107905361,107906267,107915506,107916794,107917273,107917924,107919010,107919194	107891289,107893278,107901817,107902393,107903547,107905058,107905504,107906368,107915696,107916964,107917462,107918061,107919099,107921203	Gene ID= ENSG00000091140.13 TPM= 82.9 Transcript Type= protein_coding
chr7	107923799	108003126	107923799	108003126	-	transcript4987.chr7.nic@LAMB1	transcript4987.chr7.nic	protein_coding	108002849,108001558,107998357,107994887,107986175,107986022,107980609,107978047,107975689,107975234,107974986,107972992,107964552,107962905,107961549,107961206,107960445,107959691,107959249,107955467,107953530,107952009,107951226,107939989,107937093,107935415,107932174,107931356,107929412,107929064,107926183,107924230,107923799	108003126,108001733,107998492,107994960,107986363,107986085,107980811,107978167,107975877,107975413,107975098,107973071,107964687,107963063,107961676,107961329,107960649,107959834,107959480,107955630,107953754,107952223,107951322,107940358,107937277,107935656,107932377,107931500,107929619,107929205,107926359,107924389,107924087	Gene ID= ENSG00000091136.13 TPM= 10.31 Transcript Type= NA
chr7	107923799	108003151	107923799	108003151	-	transcript4988.chr7.nic@LAMB1	transcript4988.chr7.nic	protein_coding	108003111,108001558,107998357,107994887,107986175,107986022,107980609,107978047,107975689,107975234,107974986,107972992,107964552,107962905,107961549,107961206,107960445,107959691,107959249,107955467,107953530,107952009,107951226,107939989,107937093,107935415,107932174,107931356,107929412,107929064,107926183,107924230,107923799	108003151,108002971,107998492,107994960,107986363,107986085,107980811,107978167,107975877,107975413,107975098,107973071,107964687,107963063,107961676,107961329,107960649,107959834,107959480,107955630,107953754,107952223,107951322,107940358,107937277,107935656,107932377,107931500,107929619,107929205,107926359,107924389,107924087	Gene ID= ENSG00000091136.13 TPM= 5.64 Transcript Type= NA
chr7	107923803	108002027	107923803	108002027	-	ENST00000393561.5@LAMB1	ENST00000393561.5	protein_coding	108001558,107998357,107994887,107986175,107986022,107980609,107978047,107975689,107975234,107974986,107972992,107964552,107962905,107961549,107961206,107960445,107959691,107959249,107955467,107953530,107952009,107951226,107939989,107937093,107935415,107932174,107931356,107929412,107929064,107926183,107924230,107923803	108002027,107998492,107994960,107986363,107986085,107980811,107978167,107975877,107975413,107975098,107973071,107964687,107963063,107961676,107961329,107960649,107959834,107959480,107955630,107953754,107952223,107951322,107940358,107937277,107935656,107932377,107931500,107929619,107929205,107926359,107924389,107924087	Gene ID= ENSG00000091136.13 TPM= 62.27 Transcript Type= protein_coding
chr7	107923818	108003255	107923818	108003255	-	ENST00000222399.10@LAMB1	ENST00000222399.10	protein_coding	108003111,108002849,108001558,107998357,107994887,107986175,107986022,107980609,107978047,107975689,107975234,107974986,107972992,107964552,107962905,107961549,107961206,107960445,107959691,107959249,107955467,107953530,107952009,107951226,107939989,107937093,107935415,107932174,107931356,107929412,107929064,107926183,107924230,107923818	108003255,108002971,108001733,107998492,107994960,107986363,107986085,107980811,107978167,107975877,107975413,107975098,107973071,107964687,107963063,107961676,107961329,107960649,107959834,107959480,107955630,107953754,107952223,107951322,107940358,107937277,107935656,107932377,107931500,107929619,107929205,107926359,107924389,107924087	Gene ID= ENSG00000091136.13 TPM= 133.11 Transcript Type= protein_coding
chr7	108147662	108456339	108147662	108456339	-	ENST00000351718.8@NRCAM	ENST00000351718.8	protein_coding	108456243,108399436,108312665,108239959,108234583,108232326,108231031,108226208,108225645,108223725,108209421,108207528,108197956,108195761,108194262,108194024,108191729,108189645,108184417,108184241,108182695,108181822,108180223,108177990,108176430,108160361,108159463,108147662	108456339,108399593,108312731,108240170,108234688,108232522,108231153,108226378,108225701,108223836,108209605,108207659,108198099,108195872,108194428,108194171,108191853,108189746,108184614,108184311,108182920,108181937,108180427,108178112,108176606,108160492,108159541,108150147	Gene ID= ENSG00000091129.19 TPM= 2.34 Transcript Type= protein_coding
chr7	108471627	108526194	108471627	108526194	-	ENST00000422087.5@PNPLA8	ENST00000422087.5	protein_coding	108526029,108521476,108518190,108514436,108514144,108502491,108497483,108496584,108491410,108487759,108479184,108471627	108526194,108521521,108518301,108515574,108514293,108502642,108497577,108496755,108491467,108487953,108479379,108472675	Gene ID= ENSG00000135241.16 TPM= 1.17 Transcript Type= protein_coding
chr7	108471555	108526194	108471555	108526194	-	ENST00000257694.12@PNPLA8	ENST00000257694.12	protein_coding	108526029,108521476,108514436,108514144,108502491,108497483,108496584,108491410,108487759,108479184,108471555	108526194,108521521,108515574,108514293,108502642,108497577,108496755,108491467,108487953,108479379,108472675	Gene ID= ENSG00000135241.16 TPM= 10.51 Transcript Type= protein_coding
chr7	108471627	108526183	108471627	108526183	-	transcript5001.chr7.nic@PNPLA8	transcript5001.chr7.nic	protein_coding	108526029,108521476,108514436,108514144,108502491,108497483,108496584,108491410,108487945,108479184,108471627	108526183,108521521,108515574,108514293,108502642,108497577,108496755,108491467,108487953,108479379,108472675	Gene ID= ENSG00000135241.16 TPM= 3.5 Transcript Type= NA
chr7	108471845	108526183	108471845	108526183	-	transcript5003.chr7.nic@PNPLA8	transcript5003.chr7.nic	protein_coding	108526029,108521476,108514436,108514144,108502491,108497483,108496584,108491410,108487759,108479184,108471845	108526183,108521521,108515447,108514293,108502642,108497577,108496755,108491467,108487953,108479379,108472675	Gene ID= ENSG00000135241.16 TPM= 3.5 Transcript Type= NA
chr7	108471627	108526315	108471627	108526315	-	ENST00000453144.5@PNPLA8	ENST00000453144.5	protein_coding	108526029,108514436,108514144,108502491,108497483,108496584,108491410,108487759,108479184,108471627	108526315,108515447,108514293,108502642,108497577,108496755,108491467,108487953,108479379,108472675	Gene ID= ENSG00000135241.16 TPM= 1.17 Transcript Type= protein_coding
chr7	108471661	108526318	108471661	108526318	-	ENST00000436062.5@PNPLA8	ENST00000436062.5	protein_coding	108526029,108514436,108514144,108502491,108497483,108496584,108491410,108487759,108479184,108471661	108526318,108515574,108514293,108502642,108497577,108496755,108491467,108487953,108479379,108472675	Gene ID= ENSG00000135241.16 TPM= 4.67 Transcript Type= protein_coding
chr7	108493569	108526183	108493569	108526183	-	transcript5022.chr7.nic@PNPLA8	transcript5022.chr7.nic	protein_coding	108526029,108521476,108514436,108514144,108502491,108497483,108493569	108526183,108521521,108515574,108514293,108502642,108497577,108496755	Gene ID= ENSG00000135241.16 TPM= 2.34 Transcript Type= NA
chr7	108562227	108569723	108562227	108569723	-	ENST00000415914.3@THAP5	ENST00000415914.3	protein_coding	108569490,108565830,108562227	108569723,108566022,108565105	Gene ID= ENSG00000177683.13 TPM= 4.67 Transcript Type= protein_coding
chr7	108569568	108574850	108569568	108574850	+	ENST00000249356.3@DNAJB9	ENST00000249356.3	protein_coding	108569568,108571717,108572899	108570103,108571943,108574850	Gene ID= ENSG00000128590.4 TPM= 36.2 Transcript Type= protein_coding
chr7	111091006	111125451	111091006	111125451	+	ENST00000451085.5@LRRN3	ENST00000451085.5	protein_coding	111091006,111097027,111099881,111122415	111091504,111097133,111099962,111125451	Gene ID= ENSG00000173114.12 TPM= 2.92 Transcript Type= protein_coding
chr7	111091032	111125454	111091032	111125454	+	ENST00000422987.3@LRRN3	ENST00000422987.3	protein_coding	111091032,111122415	111091504,111125454	Gene ID= ENSG00000173114.12 TPM= 6.42 Transcript Type= protein_coding
chr7	111482190	111484862	111482190	111484862	+	transcript5045.chr7.nnic@NA	transcript5045.chr7.nnic	NA	111482190	111484862	Gene ID= novel_gene_chr7_5046 TPM= 7.01 Transcript Type= NA
chr7	111862883	112206394	111862883	112206394	-	ENST00000476846.5@DOCK4	ENST00000476846.5	protein_coding	112206102,112004048,112000494,111998448,111994135,111989015,111984306,111977132,111945717,111944811,111940110,111935540,111915779,111901677,111900374,111895612,111877030,111872467,111872269,111871990,111869574,111867984,111862883	112206394,112004131,112000534,111998503,111994231,111989163,111984390,111977283,111945798,111944871,111940242,111935628,111915904,111901801,111900536,111895718,111877186,111872564,111872352,111872090,111869655,111868154,111863564	Gene ID= ENSG00000128512.20 TPM= 1.75 Transcript Type= processed_transcript
chr7	111801686	112004132	111801686	112004132	-	ENST00000494651.7@DOCK4	ENST00000494651.7	protein_coding	112004048,112000494,111998448,111994135,111989015,111984306,111977132,111945717,111944811,111940110,111935540,111915779,111901677,111900374,111895612,111877030,111872467,111872269,111871990,111869574,111867984,111863372,111846999,111844763,111834588,111822362,111811874,111809301,111808817,111808752,111808178,111807896,111807521,111801686	112004132,112000534,111998503,111994231,111989163,111984390,111977283,111945798,111944871,111940242,111935628,111915904,111901801,111900536,111895718,111877186,111872564,111872352,111872090,111869655,111868154,111863564,111847126,111844897,111834686,111822456,111811949,111809401,111808879,111808763,111808185,111807899,111807594,111801735	Gene ID= ENSG00000128512.20 TPM= 9.92 Transcript Type= protein_coding
chr7	111728240	111740760	111728240	111740760	-	transcript5053.chr7.nnic@DOCK4	transcript5053.chr7.nnic	protein_coding	111740594,111739396,111739134,111736917,111735054,111732226,111728240	111740760,111740291,111739243,111736991,111735167,111732290,111728722	Gene ID= ENSG00000128512.20 TPM= 3.5 Transcript Type= NA
chr7	111728240	111740759	111728240	111740759	-	transcript5054.chr7.nnic@DOCK4	transcript5054.chr7.nnic	protein_coding	111740696,111739134,111736917,111735054,111732226,111728240	111740759,111740176,111736991,111735167,111732290,111728722	Gene ID= ENSG00000128512.20 TPM= 3.5 Transcript Type= NA
chr7	111727360	111728815	111727360	111728815	-	transcript5063.chr7.nnic@NA	transcript5063.chr7.nnic	NA	111727360	111728815	Gene ID= novel_gene_chr7_5064 TPM= 3.5 Transcript Type= NA
chr7	111741215	111745693	111741215	111745693	+	transcript5061.chr7.nnic@NA	transcript5061.chr7.nnic	NA	111741215	111745693	Gene ID= novel_gene_chr7_5062 TPM= 2.34 Transcript Type= NA
chr7	112206588	112343096	112206588	112343096	+	ENST00000361822.7@ZNF277	ENST00000361822.7	protein_coding	112206588,112286873,112295869,112296229,112318182,112327717,112330084,112336104,112337730,112339843,112340872,112342561	112206807,112287074,112295957,112296311,112318273,112327827,112330216,112336171,112337826,112339885,112341046,112343096	Gene ID= ENSG00000198839.9 TPM= 9.34 Transcript Type= protein_coding
chr7	112206691	112343951	112206691	112343951	+	transcript5081.chr7.nic@ZNF277	transcript5081.chr7.nic	protein_coding	112206691,112286873,112296229,112318182,112327717,112330084,112336104,112337730,112339843,112340872,112342561	112206807,112287074,112296311,112318273,112327827,112330216,112336171,112337826,112339885,112341046,112343951	Gene ID= ENSG00000198839.9 TPM= 2.34 Transcript Type= NA
chr7	112330550	112334750	112330550	112334750	-	transcript5086.chr7.nnic@NA	transcript5086.chr7.nnic	NA	112330550	112334750	Gene ID= novel_gene_chr7_5087 TPM= 16.35 Transcript Type= NA
chr7	112351763	112356615	112351763	112356615	+	transcript5084.chr7.nnic@NA	transcript5084.chr7.nnic	NA	112351763	112356615	Gene ID= novel_gene_chr7_5085 TPM= 4.67 Transcript Type= NA
chr7	112450428	112476192	112450428	112476192	+	ENST00000403825.7@IFRD1	ENST00000403825.7	protein_coding	112450428,112455763,112456002,112456914,112458861,112461866,112462001,112462270,112467981,112472219,112472766,112475430	112450782,112455867,112456086,112457038,112459018,112461916,112462179,112462378,112468115,112472347,112472861,112476192	Gene ID= ENSG00000006652.13 TPM= 80.56 Transcript Type= protein_coding
chr7	112450459	112475729	112450459	112475729	+	transcript5100.chr7.nic@IFRD1	transcript5100.chr7.nic	protein_coding	112450459,112455763,112456002,112456914,112458861,112462001,112462270,112467981,112472219,112472766,112475430	112450782,112455867,112456086,112457038,112461916,112462179,112462378,112468115,112472347,112472861,112475729	Gene ID= ENSG00000006652.13 TPM= 4.67 Transcript Type= NA
chr7	112762382	112790592	112762382	112790592	-	ENST00000312814.10@TMEM168	ENST00000312814.10	protein_coding	112790160,112783698,112775176,112772781,112762382	112790592,112784953,112775318,112773055,112767744	Gene ID= ENSG00000146802.12 TPM= 9.34 Transcript Type= protein_coding
chr7	112765732	112790424	112765732	112790424	-	transcript5112.chr7.nic@TMEM168	transcript5112.chr7.nic	protein_coding	112790160,112783698,112775176,112772781,112765732	112790424,112784953,112775318,112772818,112767744	Gene ID= ENSG00000146802.12 TPM= 2.34 Transcript Type= NA
chr7	112787715	112790396	112787715	112790396	-	transcript5117.chr7.nnic@NA	transcript5117.chr7.nnic	NA	112787715	112790396	Gene ID= novel_gene_chr7_5118 TPM= 16.35 Transcript Type= NA
chr7	112819147	112939916	112819147	112939916	-	ENST00000297145.8@BMT2	ENST00000297145.8	protein_coding	112939591,112915306,112895569,112832561,112819147	112939916,112915447,112895739,112832675,112822373	Gene ID= ENSG00000164603.11 TPM= 21.02 Transcript Type= protein_coding
chr7	113116718	113118613	113116718	113118613	-	ENST00000397764.7@SMIM30	ENST00000397764.7	protein_coding	113118528,113118068,113116718	113118613,113118161,113117607	Gene ID= ENSG00000214194.8 TPM= 7.01 Transcript Type= protein_coding
chr7	114922372	115018744	114922372	115018744	+	transcript5141.chr7.nnic@MDFIC	transcript5141.chr7.nnic	protein_coding	114922372,114922927,114942275,115015688	114922636,114923127,114942397,115018744	Gene ID= ENSG00000135272.10 TPM= 3.89 Transcript Type= NA
chr7	115935156	116030813	115935156	116030813	-	ENST00000320239.11@TFEC	ENST00000320239.11	protein_coding	116030633,115984262,115956679,115954586,115950874,115941893,115935156	116030813,115984513,115956793,115954642,115950949,115942040,115940931	Gene ID= ENSG00000105967.15 TPM= 3.5 Transcript Type= protein_coding
chr7	116210493	116258783	116210493	116258783	+	ENST00000358204.8@TES	ENST00000358204.8	protein_coding	116210493,116234534,116249020,116250161,116251760,116252318,116257294	116210734,116234619,116249272,116250496,116251975,116252476,116258783	Gene ID= ENSG00000135269.17 TPM= 195.77 Transcript Type= protein_coding
chr7	116210505	116258783	116210505	116258783	+	transcript5156.chr7.nic@TES	transcript5156.chr7.nic	protein_coding	116210505,116234534,116249020,116251760,116252318,116257294	116210734,116234619,116250496,116251975,116252476,116258783	Gene ID= ENSG00000135269.17 TPM= 7.39 Transcript Type= NA
chr7	116499390	116508541	116499390	116508541	+	ENST00000222693.4@CAV2	ENST00000222693.4	protein_coding	116499390,116500260,116505971	116499931,116500447,116508541	Gene ID= ENSG00000105971.14 TPM= 458.28 Transcript Type= protein_coding
chr7	116499780	116501286	116499780	116501286	+	ENST00000393480.3@CAV2	ENST00000393480.3	protein_coding	116499780,116500260	116499931,116501286	Gene ID= ENSG00000105971.14 TPM= 3.5 Transcript Type= protein_coding
chr7	116525009	116559636	116525009	116559636	+	ENST00000451122.5@CAV1	ENST00000451122.5	protein_coding	116525009,116526525,116558946	116525805,116526689,116559636	Gene ID= ENSG00000105974.11 TPM= 43.2 Transcript Type= nonsense_mediated_decay
chr7	116525009	116561184	116525009	116561184	+	ENST00000614113.4@CAV1	ENST00000614113.4	protein_coding	116525009,116526525,116558946	116525805,116526689,116561184	Gene ID= ENSG00000105974.11 TPM= 261.45 Transcript Type= protein_coding
chr7	116526293	116561176	116526293	116561176	+	ENST00000393467.1@CAV1	ENST00000393467.1	protein_coding	116526293,116558946	116526689,116561176	Gene ID= ENSG00000105974.11 TPM= 1046.72 Transcript Type= protein_coding
chr7	116524785	116561176	116524785	116561176	+	ENST00000341049.6@CAV1	ENST00000341049.6	protein_coding	116524785,116526525,116558946	116525092,116526689,116561176	Gene ID= ENSG00000105974.11 TPM= 84.63 Transcript Type= protein_coding
chr7	116525740	116561179	116525740	116561179	+	ENST00000405348.5@CAV1	ENST00000405348.5	protein_coding	116525740,116526525,116558946	116525783,116526689,116561179	Gene ID= ENSG00000105974.11 TPM= 16.72 Transcript Type= protein_coding
chr7	116530210	116539999	116530210	116539999	-	transcript5214.chr7.nnic@NA	transcript5214.chr7.nnic	NA	116530210	116539999	Gene ID= novel_gene_chr7_5215 TPM= 32.69 Transcript Type= NA
chr7	116672378	116798386	116672378	116798386	+	transcript5216.chr7.nic@MET	transcript5216.chr7.nic	protein_coding	116672378,116695750,116699071,116731668,116739950,116740852,116755355,116757437,116757638,116758459,116759391,116763050,116769645,116771498,116771849,116774881,116777389,116778776,116781988,116783304,116795655,116795887	116672577,116695799,116700284,116731859,116740084,116741025,116755515,116757539,116757774,116758620,116759490,116763268,116769791,116771654,116771989,116775111,116777469,116778957,116782097,116783469,116795791,116798386	Gene ID= ENSG00000105976.14 TPM= 4.67 Transcript Type= NA
chr7	116672392	116798386	116672392	116798386	+	ENST00000397752.7@MET	ENST00000397752.7	protein_coding	116672392,116699071,116731668,116739950,116740852,116755355,116757437,116757638,116758459,116759391,116763050,116769645,116771498,116771849,116774881,116777389,116778776,116781988,116783304,116795655,116795887	116672577,116700284,116731859,116740084,116741025,116755515,116757539,116757774,116758620,116759490,116763268,116769791,116771654,116771989,116775111,116777469,116778957,116782097,116783469,116795791,116798386	Gene ID= ENSG00000105976.14 TPM= 47.87 Transcript Type= protein_coding
chr7	116862473	116922049	116862473	116922049	+	ENST00000361183.7@CAPZA2	ENST00000361183.7	protein_coding	116862473,116888127,116892994,116898772,116904177,116906263,116910233,116912069,116916060,116917727	116862650,116888190,116893045,116898835,116904383,116906342,116910311,116912140,116916122,116922049	Gene ID= ENSG00000198898.13 TPM= 2.34 Transcript Type= protein_coding
chr7	116908638	116910129	116908638	116910129	-	transcript5250.chr7.nnic@NA	transcript5250.chr7.nnic	NA	116908638	116910129	Gene ID= novel_gene_chr7_5251 TPM= 2.34 Transcript Type= NA
chr7	116952592	116954323	116952592	116954323	-	transcript5274.chr7.nnic@NA	transcript5274.chr7.nnic	NA	116952592	116954323	Gene ID= novel_gene_chr7_5275 TPM= 3.5 Transcript Type= NA
chr7	116953339	117223907	116953339	117223907	+	transcript5261.chr7.nic@ST7	transcript5261.chr7.nic	protein_coding	116953339,117099762,117119561,117129793,117130491,117131885,117136081,117138435,117170862,117189321,117190834,117209787,117219084,117221923,117222861	116953691,117099844,117119720,117129847,117130606,117131960,117136235,117138532,117170976,117189393,117190936,117209937,117219176,117222062,117223907	Gene ID= ENSG00000004866.20 TPM= 2.34 Transcript Type= NA
chr7	116953342	117230103	116953342	117230103	+	ENST00000393451.7@ST7	ENST00000393451.7	protein_coding	116953342,117099762,117119561,117129793,117130491,117131885,117136081,117138435,117170862,117189321,117190834,117209787,117219084,117221923,117229762	116953691,117099844,117119720,117129847,117130606,117131960,117136235,117138532,117170976,117189393,117190936,117209937,117219176,117222062,117230103	Gene ID= ENSG00000004866.20 TPM= 17.9 Transcript Type= protein_coding
chr7	116953379	117230103	116953379	117230103	+	ENST00000323984.7@ST7	ENST00000323984.7	protein_coding	116953379,117099762,117119561,117129793,117130491,117131885,117134124,117136081,117138435,117170862,117189321,117190834,117209787,117219084,117221923,117229762	116953691,117099844,117119720,117129847,117130606,117131960,117134192,117136235,117138532,117170976,117189393,117190936,117209937,117219176,117222062,117230103	Gene ID= ENSG00000004866.20 TPM= 14.4 Transcript Type= protein_coding
chr7	116953327	117223907	116953327	117223907	+	ENST00000265437.9@ST7	ENST00000265437.9	protein_coding	116953327,117099762,117119561,117129793,117130491,117131885,117134124,117136081,117138435,117170862,117189321,117190834,117209787,117219084,117221923,117222861	116953691,117099844,117119720,117129847,117130606,117131960,117134192,117136235,117138532,117170976,117189393,117190936,117209937,117219176,117222062,117223907	Gene ID= ENSG00000004866.20 TPM= 8.17 Transcript Type= protein_coding
chr7	116953379	117230103	116953379	117230103	+	ENST00000393449.5@ST7	ENST00000393449.5	protein_coding	116953379,117099762,117119561,117129793,117130491,117131885,117134124,117136081,117138435,117170862,117189321,117190834,117209787,117219084,117221923,117229762	116953691,117099844,117119720,117129847,117130606,117131960,117134192,117136235,117138532,117170976,117189393,117190936,117209922,117219176,117222062,117230103	Gene ID= ENSG00000004866.20 TPM= 1.55 Transcript Type= protein_coding
chr7	116979960	116983698	116979960	116983698	-	transcript5272.chr7.nnic@NA	transcript5272.chr7.nnic	NA	116979960	116983698	Gene ID= novel_gene_chr7_5273 TPM= 3.5 Transcript Type= NA
chr7	117225762	117230101	117225762	117230101	+	transcript5270.chr7.nnic@NA	transcript5270.chr7.nnic	NA	117225762	117230101	Gene ID= novel_gene_chr7_5271 TPM= 2.34 Transcript Type= NA
chr7	117276631	117323289	117276631	117323289	-	ENST00000265441.7@WNT2	ENST00000265441.7	protein_coding	117322907,117320567,117315071,117297612,117276631	117323289,117320793,117315348,117297876,117278384	Gene ID= ENSG00000105989.8 TPM= 5.84 Transcript Type= protein_coding
chr7	117479963	117668665	117479963	117668665	+	ENST00000003084.10@CFTR	ENST00000003084.10	protein_coding	117479963,117504253,117509034,117530899,117534276,117535248,117536548,117540100,117542016,117548641,117559464,117587739,117590353,117591934,117594930,117602826,117603532,117606674,117610519,117611581,117614613,117627522,117642438,117652842,117664688,117665459,117666908	117480147,117504363,117509142,117531114,117534365,117535411,117536673,117540346,117542108,117548823,117559655,117587833,117590439,117592657,117595058,117602863,117603782,117606753,117610669,117611808,117614713,117627770,117642593,117652931,117664860,117665564,117668665	Gene ID= ENSG00000001626.14 TPM= 10.51 Transcript Type= protein_coding
chr7	117710651	117873507	117710651	117873507	-	ENST00000160373.7@CTTNBP2	ENST00000160373.7	protein_coding	117873335,117861209,117810765,117791128,117784251,117782862,117780441,117777511,117767059,117760435,117757875,117756555,117746013,117745831,117735269,117734913,117728089,117725052,117724547,117721067,117719504,117718018,117710651	117873507,117861316,117810989,117792781,117784454,117782961,117780591,117777765,117767176,117760710,117757970,117756634,117746099,117745930,117735421,117735100,117728267,117725257,117724732,117721130,117719636,117718119,117711782	Gene ID= ENSG00000077063.10 TPM= 1.17 Transcript Type= protein_coding
chr7	118184032	118192824	118184032	118192824	+	ENST00000249299.6@LSM8	ENST00000249299.6	protein_coding	118184032,118185654,118188278,118191912	118184254,118185694,118188405,118192824	Gene ID= ENSG00000128534.7 TPM= 10.51 Transcript Type= protein_coding
chr7	118184156	118192164	118184156	118192164	+	ENST00000422760.1@LSM8	ENST00000422760.1	protein_coding	118184156,118188278,118191912	118185694,118188405,118192164	Gene ID= ENSG00000128534.7 TPM= 2.34 Transcript Type= protein_coding
chr7	118185255	118189685	118185255	118189685	-	transcript5306.chr7.nnic@NA	transcript5306.chr7.nnic	NA	118185255	118189685	Gene ID= novel_gene_chr7_5307 TPM= 5.84 Transcript Type= NA
chr7	120787320	120858331	120787320	120858331	-	transcript5311.chr7.nic@TSPAN12	transcript5311.chr7.nic	protein_coding	120858234,120857820,120856698,120840027,120838777,120815729,120810463,120806549,120787320	120858331,120857988,120856833,120840109,120838912,120815803,120810570,120806692,120788897	Gene ID= ENSG00000106025.8 TPM= 50.41 Transcript Type= NA
chr7	120787320	120858357	120787320	120858357	-	ENST00000222747.7@TSPAN12	ENST00000222747.7	protein_coding	120857820,120856698,120840027,120838777,120815729,120810463,120806549,120787320	120858357,120856833,120840109,120838912,120815803,120810570,120806692,120788897	Gene ID= ENSG00000106025.8 TPM= 95.36 Transcript Type= protein_coding
chr7	120950749	120977216	120950749	120977216	+	ENST00000315870.9@ING3	ENST00000315870.9	protein_coding	120950749,120951164,120953304,120955559,120964742,120966626,120967529,120967934,120969011,120970688,120973205,120974728	120950924,120951235,120953404,120955624,120964838,120966697,120967648,120968091,120969204,120970880,120973243,120977216	Gene ID= ENSG00000071243.15 TPM= 12.84 Transcript Type= protein_coding
chr7	120951116	120975014	120951116	120975014	+	ENST00000431467.1@ING3	ENST00000431467.1	protein_coding	120951116,120953304,120955559,120964742,120966626,120967529,120967934,120969011,120970688,120973205,120974728	120951235,120953404,120955624,120964838,120966697,120967648,120968091,120969204,120970880,120973243,120975014	Gene ID= ENSG00000071243.15 TPM= 1.17 Transcript Type= protein_coding
chr7	120950763	120956980	120950763	120956980	+	ENST00000339121.9@ING3	ENST00000339121.9	protein_coding	120950763,120951164,120953304,120955559,120956160	120950924,120951235,120953404,120955624,120956980	Gene ID= ENSG00000071243.15 TPM= 2.34 Transcript Type= protein_coding
chr7	120950795	120956978	120950795	120956978	+	ENST00000445699.5@ING3	ENST00000445699.5	protein_coding	120950795,120951164,120953304,120955559	120950924,120951235,120953404,120956978	Gene ID= ENSG00000071243.15 TPM= 1.17 Transcript Type= protein_coding
chr7	120988725	121297444	120988725	121297444	+	transcript5329.chr7.nnic@CPED1	transcript5329.chr7.nnic	protein_coding	120988725,120989391,121046887,121064238,121097699,121099926,121124331,121125820,121127090,121128382,121130125,121133823,121136040,121140827,121141973,121236714,121244202,121266227,121266707,121267215,121271284,121295440	120988912,120989870,121046993,121064313,121097831,121100094,121124473,121125892,121127257,121128486,121130294,121133893,121136090,121141013,121142141,121236831,121244338,121266447,121266808,121267302,121271430,121297444	Gene ID= ENSG00000106034.17 TPM= 3.5 Transcript Type= NA
chr7	120988704	121297444	120988704	121297444	+	transcript5330.chr7.nic@CPED1	transcript5330.chr7.nic	protein_coding	120988704,121015665,121046887,121064238,121097699,121099926,121124331,121125820,121127090,121128382,121130125,121133823,121136040,121140827,121141973,121236714,121244202,121266227,121266707,121267215,121271284,121295440	120989870,121015848,121046993,121064313,121097831,121100094,121124473,121125892,121127257,121128486,121130294,121133893,121136090,121141013,121142141,121236831,121244338,121266447,121266808,121267302,121271430,121297444	Gene ID= ENSG00000106034.17 TPM= 12.84 Transcript Type= NA
chr7	120988704	121297439	120988704	121297439	+	transcript5331.chr7.nnic@CPED1	transcript5331.chr7.nnic	protein_coding	120988704,121015665,121046887,121064238,121097699,121099926,121124331,121125820,121127090,121128382,121130125,121133823,121136040,121140827,121141973,121236714,121244202,121266227,121266707,121267215,121295440	120989870,121015848,121046993,121064313,121097831,121100094,121124473,121125892,121127257,121128486,121130294,121133893,121136090,121141013,121142141,121236831,121244338,121266447,121266808,121267302,121297439	Gene ID= ENSG00000106034.17 TPM= 2.34 Transcript Type= NA
chr7	120988677	121297444	120988677	121297444	+	ENST00000310396.9@CPED1	ENST00000310396.9	protein_coding	120988677,120989391,121015665,121046887,121064238,121097699,121099926,121124331,121125820,121127090,121128382,121130125,121133823,121136040,121140827,121141973,121236714,121244202,121266227,121266707,121267215,121271284,121295440	120988912,120989870,121015848,121046993,121064313,121097831,121100094,121124473,121125892,121127257,121128486,121130294,121133893,121136090,121141013,121142141,121236831,121244338,121266447,121266808,121267302,121271430,121297444	Gene ID= ENSG00000106034.17 TPM= 31.53 Transcript Type= protein_coding
chr7	121348851	121396334	121348851	121396334	-	ENST00000359943.7@FAM3C	ENST00000359943.7	protein_coding	121396162,121382957,121378910,121372110,121371300,121364130,121362897,121360043,121351143,121348851	121396334,121383010,121379014,121372139,121371423,121364188,121362947,121360127,121351269,121350550	Gene ID= ENSG00000196937.10 TPM= 118.51 Transcript Type= protein_coding
chr7	122076242	122144280	122076242	122144280	-	ENST00000417368.6@AASS	ENST00000417368.6	protein_coding	122144161,122133517,122129361,122126375,122118563,122118307,122116879,122116633,122115074,122113598,122113118,122101621,122101371,122098745,122098450,122093048,122092843,122091703,122086012,122081500,122079597,122078862,122077838,122076242	122144280,122133741,122129537,122126459,122118630,122118453,122116957,122116760,122115222,122113720,122113229,122101680,122101438,122098866,122098576,122093158,122092951,122091843,122086179,122081595,122079712,122078950,122078014,122076607	Gene ID= ENSG00000008311.14 TPM= 2.34 Transcript Type= protein_coding
chr7	122135588	122140506	122135588	122140506	+	transcript5360.chr7.nnic@NA	transcript5360.chr7.nnic	NA	122135588	122140506	Gene ID= novel_gene_chr7_5361 TPM= 24.52 Transcript Type= NA
chr7	122319324	122886525	122319324	122886525	-	transcript5362.chr7.nic@CADPS2	transcript5362.chr7.nic	protein_coding	122885999,122736955,122663237,122629248,122621481,122615181,122581179,122554550,122513249,122491312,122490081,122474381,122471375,122451374,122441512,122438341,122436360,122416061,122407540,122393441,122388583,122387026,122386295,122379368,122360930,122360788,122345574,122325477,122319324	122886525,122737068,122663569,122629328,122621717,122615299,122581290,122554689,122513315,122491420,122490281,122474517,122471562,122451475,122441575,122438464,122436380,122416164,122407696,122393582,122388738,122387173,122386309,122379442,122361013,122360820,122345681,122325581,122320338	Gene ID= ENSG00000081803.15 TPM= 3.12 Transcript Type= NA
chr7	122614169	122619474	122614169	122619474	+	transcript5380.chr7.nnic@NA	transcript5380.chr7.nnic	NA	122614169	122619474	Gene ID= novel_gene_chr7_5381 TPM= 2.34 Transcript Type= NA
chr7	123541029	123558255	123541029	123558255	-	ENST00000355749.6@NDUFA5	ENST00000355749.6	protein_coding	123557775,123557404,123550470,123545611,123541029	123558255,123557448,123550586,123545676,123542220	Gene ID= ENSG00000128609.14 TPM= 110.92 Transcript Type= protein_coding
chr7	123541030	123557904	123541030	123557904	-	ENST00000611607.4@NDUFA5	ENST00000611607.4	protein_coding	123557775,123550470,123545611,123541030	123557904,123550586,123545676,123542220	Gene ID= ENSG00000128609.14 TPM= 3.5 Transcript Type= protein_coding
chr7	123541029	123557803	123541029	123557803	-	transcript5386.chr7.nic@NDUFA5	transcript5386.chr7.nic	protein_coding	123557775,123557404,123545611,123541029	123557803,123557448,123550586,123542220	Gene ID= ENSG00000128609.14 TPM= 3.5 Transcript Type= NA
chr7	123554695	123557822	123554695	123557822	-	ENST00000490618.1@NDUFA5	ENST00000490618.1	protein_coding	123557775,123554695	123557822,123557448	Gene ID= ENSG00000128609.14 TPM= 1.17 Transcript Type= retained_intron
chr7	123681935	123749067	123681935	123749067	-	ENST00000223023.4@WASL	ENST00000223023.4	protein_coding	123748618,123709089,123706740,123706277,123704634,123696579,123695823,123694715,123692347,123689042,123681935	123749067,123709223,123706826,123706373,123704657,123696747,123695865,123694868,123692867,123689150,123684580	Gene ID= ENSG00000106299.7 TPM= 100.41 Transcript Type= protein_coding
chr7	123748429	123750979	123748429	123750979	+	transcript5394.chr7.nnic@NA	transcript5394.chr7.nnic	NA	123748429	123750979	Gene ID= novel_gene_chr7_5395 TPM= 14.01 Transcript Type= NA
chr7	123790605	123790711	123790605	123790711	-	ENST00000364234.1@RNU6-11P	ENST00000364234.1	snRNA	123790605	123790711	Gene ID= ENSG00000201104.1 TPM= 3.5 Transcript Type= snRNA
chr7	124822386	124929981	124822386	124929981	-	ENST00000357628.7@POT1	ENST00000357628.7	protein_coding	124929794,124928815,124915574,124898261,124897165,124892266,124870911,124863350,124858957,124852972,124851872,124846942,124842807,124840973,124835279,124829254,124827214,124825252,124822386	124929981,124928999,124915646,124898374,124897212,124892380,124871041,124863640,124859112,124853138,124851951,124846998,124842963,124841178,124835414,124829342,124827305,124825357,124824074	Gene ID= ENSG00000128513.14 TPM= 1.17 Transcript Type= protein_coding
chr7	124822387	124929983	124822387	124929983	-	ENST00000393329.5@POT1	ENST00000393329.5	protein_coding	124929794,124928815,124915574,124898261,124897165,124892266,124863350,124858957,124852972,124851872,124846942,124842807,124840973,124835279,124829254,124827214,124825252,124822387	124929983,124928999,124915646,124898374,124897212,124892380,124863640,124859112,124853138,124851951,124846998,124842963,124841178,124835414,124829342,124827305,124825357,124824074	Gene ID= ENSG00000128513.14 TPM= 1.17 Transcript Type= protein_coding
chr7	127343377	127345815	127343377	127345815	-	transcript5410.chr7.nnic@NA	transcript5410.chr7.nnic	NA	127343377	127345815	Gene ID= novel_gene_chr7_5411 TPM= 2.34 Transcript Type= NA
chr7	127580618	127585607	127580618	127585607	-	ENST00000321407.2@GCC1	ENST00000321407.2	protein_coding	127584151,127580618	127585607,127583309	Gene ID= ENSG00000179562.2 TPM= 67.72 Transcript Type= protein_coding
chr7	127588345	127591705	127588345	127591705	+	ENST00000000233.9@ARF5	ENST00000000233.9	protein_coding	127588345,127589083,127589485,127590066,127590963,127591213	127588565,127589163,127589594,127590137,127591088,127591705	Gene ID= ENSG00000004059.10 TPM= 131.35 Transcript Type= protein_coding
chr7	127588386	127591681	127588386	127591681	+	ENST00000463733.5@ARF5	ENST00000463733.5	protein_coding	127588386,127589083,127589485,127590963,127591213	127588565,127589163,127590137,127591088,127591681	Gene ID= ENSG00000004059.10 TPM= 7.59 Transcript Type= retained_intron
chr7	127652180	128092607	127652180	128092607	+	ENST00000354725.7@SND1	ENST00000354725.7	protein_coding	127652180,127686613,127694828,127698875,127701163,127702435,127703165,127704839,127707557,127721287,127807484,127844324,127887902,127904747,127929188,127990947,128074502,128081360,128084724,128085711,128086938,128089489,128091837,128091993	127652451,127686762,127694948,127698953,127701323,127702526,127703323,127704945,127707647,127721400,127807573,127844424,127888012,127904819,127929329,127991056,128074690,128081501,128084847,128085780,128087051,128089692,128091881,128092607	Gene ID= ENSG00000197157.10 TPM= 347.94 Transcript Type= protein_coding
chr7	127808165	127814945	127808165	127814945	-	transcript5443.chr7.nnic@NA	transcript5443.chr7.nnic	NA	127808165	127814945	Gene ID= novel_gene_chr7_5444 TPM= 4.67 Transcript Type= NA
chr7	128027071	128031070	128027071	128031070	-	ENST00000249363.3@LRRC4	ENST00000249363.3	protein_coding	128030913,128027071	128031070,128030740	Gene ID= ENSG00000128594.7 TPM= 2.34 Transcript Type= protein_coding
chr7	128297685	128343908	128297685	128343908	-	ENST00000223073.6@RBM28	ENST00000223073.6	protein_coding	128343676,128339633,128339227,128338726,128338250,128337131,128335847,128335543,128333290,128330819,128325818,128324559,128323527,128321266,128317957,128317659,128314764,128313175,128297685	128343908,128339791,128339321,128338801,128338342,128337202,128336042,128335679,128333362,128330928,128325891,128324694,128323591,128321424,128318106,128317733,128315020,128313274,128310931	Gene ID= ENSG00000106344.8 TPM= 52.54 Transcript Type= protein_coding
chr7	128310397	128343912	128310397	128343912	-	transcript5451.chr7.nic@RBM28	transcript5451.chr7.nic	protein_coding	128343676,128339633,128339227,128338726,128338250,128337131,128335543,128333290,128330819,128325818,128324559,128323527,128321266,128317957,128317659,128314764,128313175,128310397	128343912,128339791,128339321,128338801,128338342,128337202,128336042,128333362,128330928,128325891,128324694,128323591,128321424,128318106,128317733,128315020,128313274,128310931	Gene ID= ENSG00000106344.8 TPM= 2.34 Transcript Type= NA
chr7	128392277	128410252	128392277	128410252	-	ENST00000338791.10@IMPDH1	ENST00000338791.10	protein_coding	128409756,128409441,128409289,128405767,128403706,128401015,128400817,128400333,128400095,128398414,128396932,128396600,128395131,128394889,128394456,128394278,128392277	128410252,128409484,128409352,128405865,128403754,128401116,128400891,128400539,128400182,128398613,128397022,128396695,128395274,128395033,128394599,128394361,128393028	Gene ID= ENSG00000106348.16 TPM= 4.9 Transcript Type= protein_coding
chr7	128392278	128409982	128392278	128409982	-	ENST00000354269.9@IMPDH1	ENST00000354269.9	protein_coding	128409756,128409289,128405767,128403706,128401015,128400817,128400333,128400095,128398414,128396932,128396600,128395131,128394889,128394456,128394278,128392278	128409982,128409366,128405865,128403754,128401116,128400891,128400539,128400182,128398613,128397022,128396695,128395274,128395033,128394599,128394361,128393028	Gene ID= ENSG00000106348.16 TPM= 15.06 Transcript Type= protein_coding
chr7	128392293	128409995	128392293	128409995	-	transcript5463.chr7.nic@IMPDH1	transcript5463.chr7.nic	protein_coding	128409756,128409289,128405767,128403706,128401015,128400817,128400333,128400095,128398414,128396932,128396600,128395131,128394889,128394456,128394278,128392293	128409995,128409484,128405865,128403754,128401116,128400891,128400539,128400182,128398613,128397022,128396695,128395274,128395033,128394599,128394361,128393028	Gene ID= ENSG00000106348.16 TPM= 21.05 Transcript Type= NA
chr7	128392293	128409986	128392293	128409986	-	transcript5472.chr7.nnic@IMPDH1	transcript5472.chr7.nnic	protein_coding	128409756,128405767,128403706,128401015,128400817,128400333,128400095,128398414,128396932,128396600,128395131,128394889,128394456,128394278,128392293	128409986,128406197,128403754,128401116,128400891,128400539,128400182,128398613,128397022,128396695,128395274,128395033,128394599,128394361,128393028	Gene ID= ENSG00000106348.16 TPM= 30.98 Transcript Type= NA
chr7	128392293	128409999	128392293	128409999	-	transcript5476.chr7.nic@IMPDH1	transcript5476.chr7.nic	protein_coding	128409756,128403706,128401015,128400817,128400333,128400095,128398414,128396932,128396600,128395131,128394889,128394456,128394278,128392293	128409999,128403754,128401116,128400891,128400539,128400182,128398613,128397022,128396695,128395274,128395033,128394599,128394361,128393028	Gene ID= ENSG00000106348.16 TPM= 7.04 Transcript Type= NA
chr7	128392293	128410009	128392293	128410009	-	transcript5478.chr7.nic@IMPDH1	transcript5478.chr7.nic	protein_coding	128409756,128405767,128403706,128401015,128400333,128400095,128398414,128396932,128396600,128395131,128394889,128394456,128394278,128392293	128410009,128405865,128403754,128401116,128400539,128400182,128398613,128397022,128396695,128395274,128395033,128394599,128394361,128393028	Gene ID= ENSG00000106348.16 TPM= 6.84 Transcript Type= NA
chr7	128392301	128409982	128392301	128409982	-	ENST00000348127.10@IMPDH1	ENST00000348127.10	protein_coding	128409756,128405767,128403706,128401015,128400817,128400333,128400095,128398414,128396932,128396600,128395131,128394889,128394456,128394278,128392301	128409982,128405865,128403754,128401116,128400891,128400539,128400182,128398613,128397022,128396695,128395274,128395033,128394599,128394361,128393028	Gene ID= ENSG00000106348.16 TPM= 106.62 Transcript Type= protein_coding
chr7	128455891	128458416	128455891	128458416	+	ENST00000257696.4@HILPDA	ENST00000257696.4	protein_coding	128455891,128457201	128456023,128458416	Gene ID= ENSG00000135245.9 TPM= 19.85 Transcript Type= protein_coding
chr7	128476729	128502924	128476729	128502924	+	ENST00000262432.12@METTL2B	ENST00000262432.12	protein_coding	128476729,128477082,128479158,128480647,128488101,128493804,128498036,128500903,128501762	128476875,128477173,128479513,128480696,128488161,128493943,128498142,128500968,128502924	Gene ID= ENSG00000165055.15 TPM= 16.93 Transcript Type= protein_coding
chr7	128476729	128502126	128476729	128502126	+	ENST00000482555.5@METTL2B	ENST00000482555.5	protein_coding	128476729,128479158,128480647,128488101,128493804,128498036,128500903,128501762	128477173,128479513,128480696,128488161,128493943,128498142,128500968,128502126	Gene ID= ENSG00000165055.15 TPM= 1.75 Transcript Type= retained_intron
chr7	128652971	128654970	128652971	128654970	+	transcript5502.chr7.nnic@NA	transcript5502.chr7.nnic	NA	128652971	128654970	Gene ID= novel_gene_chr7_5503 TPM= 3.5 Transcript Type= NA
chr7	128661096	128665022	128661096	128665022	-	transcript5504.chr7.nnic@NA	transcript5504.chr7.nnic	NA	128661096	128665022	Gene ID= novel_gene_chr7_5505 TPM= 18.68 Transcript Type= NA
chr7	128739342	128771474	128739342	128771474	+	ENST00000249364.8@CALU	ENST00000249364.8	protein_coding	128739342,128748573,128754262,128758871,128759792,128767456,128769063	128739432,128748804,128754455,128759037,128759852,128767655,128771474	Gene ID= ENSG00000128595.16 TPM= 235.85 Transcript Type= protein_coding
chr7	128739363	128770576	128739363	128770576	+	ENST00000449187.6@CALU	ENST00000449187.6	protein_coding	128739363,128748573,128754529,128758871,128759792,128767456,128769063	128739432,128748804,128754722,128759037,128759852,128767655,128770576	Gene ID= ENSG00000128595.16 TPM= 19.85 Transcript Type= protein_coding
chr7	128862826	128865843	128862826	128865843	+	ENST00000249289.4@ATP6V1F	ENST00000249289.4	protein_coding	128862826,128865377	128863062,128865843	Gene ID= ENSG00000128524.4 TPM= 179.81 Transcript Type= protein_coding
chr7	128937978	128950035	128937978	128950035	+	transcript5540.chr7.nic@IRF5	transcript5540.chr7.nic	protein_coding	128937978,128942071,128945845,128946501,128947023,128947230,128947729,128948210,128948573	128938245,128942276,128946034,128946562,128947056,128947535,128948121,128948328,128950035	Gene ID= ENSG00000128604.19 TPM= 15.38 Transcript Type= NA
chr7	128937922	128950035	128937922	128950035	+	transcript5545.chr7.nic@IRF5	transcript5545.chr7.nic	protein_coding	128937922,128942071,128945845,128946501,128947023,128947729,128948210,128948573	128938049,128942276,128946034,128946562,128947535,128948121,128948328,128950035	Gene ID= ENSG00000128604.19 TPM= 11.87 Transcript Type= NA
chr7	128937989	128950035	128937989	128950035	+	ENST00000402030.6@IRF5	ENST00000402030.6	protein_coding	128937989,128942071,128945845,128946501,128947023,128947278,128947729,128948210,128948573	128938049,128942276,128946034,128946562,128947056,128947535,128948121,128948328,128950035	Gene ID= ENSG00000128604.19 TPM= 26.47 Transcript Type= protein_coding
chr7	128955088	129055144	128955088	129055144	-	transcript5553.chr7.nnic@TNPO3	transcript5553.chr7.nnic	protein_coding	129054651,129019871,129017957,129016983,129014979,129005016,129001059,129000429,128997389,128993807,128991999,128989961,128986729,128984168,128982248,128979971,128978983,128975819,128974868,128972426,128970148,128967280,128957224,128955088	129055144,129019995,129018157,129017056,129015135,129005159,129001234,129000567,128997535,128993914,128992090,128990100,128986920,128984259,128982324,128980031,128979123,128975935,128974962,128972582,128970315,128967392,128957315,128955385	Gene ID= ENSG00000064419.13 TPM= 7.39 Transcript Type= NA
chr7	128955088	129055093	128955088	129055093	-	ENST00000482320.5@TNPO3	ENST00000482320.5	protein_coding	129054651,129041557,129017957,129016983,129014979,129005016,129001059,129000429,128997389,128993807,128991999,128989961,128986729,128984168,128982248,128979971,128978983,128975819,128974868,128972426,128970148,128967280,128957224,128955088	129055093,129041717,129018157,129017056,129015135,129005159,129001234,129000567,128997535,128993914,128992090,128990100,128986920,128984259,128982324,128980031,128979123,128975935,128974962,128972582,128970315,128967392,128957315,128955385	Gene ID= ENSG00000064419.13 TPM= 2.72 Transcript Type= protein_coding
chr7	128955088	129055144	128955088	129055144	-	ENST00000471234.5@TNPO3	ENST00000471234.5	protein_coding	129054651,129017957,129016983,129014979,129005016,129001059,129000429,128997389,128993807,128991999,128989961,128984168,128982248,128979971,128978983,128975819,128974868,128972426,128970148,128967280,128957224,128955088	129055144,129018157,129017056,129015135,129005159,129001234,129000567,128997535,128993914,128992090,128990100,128984259,128982324,128980031,128979123,128975935,128974962,128972582,128970315,128967392,128957315,128955385	Gene ID= ENSG00000064419.13 TPM= 2.34 Transcript Type= protein_coding
chr7	128955088	129055126	128955088	129055126	-	transcript5561.chr7.nnic@TNPO3	transcript5561.chr7.nnic	protein_coding	129054651,129005016,129001059,129000429,128997389,128993807,128991999,128989961,128986729,128984168,128982248,128979971,128978983,128975819,128974868,128972426,128970148,128967280,128957224,128955088	129055126,129005159,129001234,129000567,128997535,128993914,128992090,128990100,128986920,128984259,128982324,128980031,128979123,128975935,128974962,128972582,128970315,128967392,128957315,128955385	Gene ID= ENSG00000064419.13 TPM= 2.72 Transcript Type= NA
chr7	128992235	128998630	128992235	128998630	-	transcript5563.chr7.nic@TNPO3	transcript5563.chr7.nic	protein_coding	128997389,128992235	128998630,128993914	Gene ID= ENSG00000064419.13 TPM= 3.5 Transcript Type= NA
chr7	129188872	129213545	129188872	129213545	+	ENST00000249373.7@SMO	ENST00000249373.7	protein_coding	129188872,129203384,129205203,129205610,129206150,129206464,129208759,129209289,129210363,129210965,129211636,129212024	129189482,129203589,129205412,129205782,129206369,129206587,129208851,129209397,129210548,129211113,129211770,129213545	Gene ID= ENSG00000128602.9 TPM= 3.5 Transcript Type= protein_coding
chr7	129225050	129430211	129225050	129430211	+	ENST00000446544.6@AHCYL2	ENST00000446544.6	protein_coding	129225050,129379641,129389056,129389634,129397222,129400290,129403379,129405097,129405836,129406378,129409476,129413594,129422840,129424874,129425063,129426443,129427039	129225439,129379749,129389199,129389734,129397324,129400384,129403485,129405213,129405899,129406466,129409546,129413688,129422938,129424942,129425141,129426563,129430211	Gene ID= ENSG00000158467.16 TPM= 14.01 Transcript Type= protein_coding
chr7	129351047	129371709	129351047	129371709	-	transcript5575.chr7.nnic@NA	transcript5575.chr7.nnic	NA	129371393,129366876,129351047	129371709,129368894,129352989	Gene ID= novel_gene_chr7_5576 TPM= 2.34 Transcript Type= NA
chr7	129366789	129371709	129366789	129371709	-	transcript5582.chr7.nnic@NA	transcript5582.chr7.nnic	NA	129371393,129366789	129371709,129368894	Gene ID= novel_gene_chr7_5583 TPM= 10.51 Transcript Type= NA
chr7	129502479	129512932	129502479	129512932	+	ENST00000462322.2@SMKR1	ENST00000462322.2	protein_coding	129502479,129512247	129502827,129512932	Gene ID= ENSG00000240204.2 TPM= 1.17 Transcript Type= protein_coding
chr7	129611714	129757080	129611714	129757080	+	ENST00000393232.5@NRF1	ENST00000393232.5	protein_coding	129611714,129657346,129671429,129677632,129690406,129709075,129710374,129711475,129717219,129727241,129755018	129611824,129657574,129671543,129677758,129690546,129709233,129710571,129711576,129717376,129727365,129757080	Gene ID= ENSG00000106459.14 TPM= 19.85 Transcript Type= protein_coding
chr7	129611756	129756015	129611756	129756015	+	ENST00000223190.8@NRF1	ENST00000223190.8	protein_coding	129611756,129657343,129671429,129677632,129690406,129709075,129710374,129711475,129717219,129727241,129755018	129611824,129657574,129671543,129677758,129690546,129709233,129710571,129711576,129717376,129727365,129756015	Gene ID= ENSG00000106459.14 TPM= 11.68 Transcript Type= protein_coding
chr7	129830732	129952949	129830732	129952949	-	ENST00000355621.7@UBE2H	ENST00000355621.7	protein_coding	129952503,129880895,129879568,129858902,129857511,129839207,129830732	129952949,129880971,129879642,129858941,129857563,129839335,129835061	Gene ID= ENSG00000186591.11 TPM= 87.57 Transcript Type= protein_coding
chr7	130018292	130051374	130018292	130051374	-	transcript5616.chr7.nnic@ZC3HC1	transcript5616.chr7.nnic	protein_coding	130050625,130049033,130040951,130039464,130028902,130026158,130024263,130023511,130022319,130018292	130051374,130049144,130041101,130039547,130029029,130026312,130024506,130023723,130022525,130018732	Gene ID= ENSG00000091732.15 TPM= 2.92 Transcript Type= NA
chr7	130018286	130051451	130018286	130051451	-	ENST00000358303.8@ZC3HC1	ENST00000358303.8	protein_coding	130051221,130049033,130040951,130039464,130028902,130026158,130024263,130023511,130022319,130018286	130051451,130049144,130041101,130039547,130029029,130026312,130024506,130023723,130022525,130018732	Gene ID= ENSG00000091732.15 TPM= 51.96 Transcript Type= protein_coding
chr7	130018326	130051389	130018326	130051389	-	ENST00000481503.5@ZC3HC1	ENST00000481503.5	protein_coding	130051221,130049033,130040951,130039464,130028902,130026158,130024263,130023511,130022319,130018326	130051389,130049144,130041101,130039547,130029029,130026312,130024377,130023723,130022525,130018732	Gene ID= ENSG00000091732.15 TPM= 2.34 Transcript Type= protein_coding
chr7	130070510	130135720	130070510	130135720	+	ENST00000335420.9@KLHDC10	ENST00000335420.9	protein_coding	130070510,130096921,130116445,130120749,130122054,130124451,130125865,130127404,130129437,130130537	130070809,130097007,130116666,130120903,130122202,130124535,130125931,130127451,130129576,130135720	Gene ID= ENSG00000128607.13 TPM= 5.25 Transcript Type= protein_coding
chr7	130070534	130135720	130070534	130135720	+	transcript5628.chr7.nic@KLHDC10	transcript5628.chr7.nic	protein_coding	130070534,130116445,130120749,130122054,130124451,130125865,130127404,130129437,130130537	130070809,130116666,130120903,130122202,130124535,130125931,130127451,130129576,130135720	Gene ID= ENSG00000128607.13 TPM= 4.09 Transcript Type= NA
chr7	130164715	130205498	130164715	130205498	-	ENST00000397622.6@TMEM209	ENST00000397622.6	protein_coding	130205373,130203974,130203788,130202532,130201850,130192622,130185192,130184184,130181623,130178402,130175512,130173825,130173632,130170400,130164715	130205498,130204110,130203846,130202663,130202091,130192823,130185367,130184255,130181719,130178527,130175609,130173939,130173729,130170473,130166505	Gene ID= ENSG00000146842.16 TPM= 28.02 Transcript Type= protein_coding
chr7	130393771	130441237	130393771	130441237	-	ENST00000223208.9@CEP41	ENST00000223208.9	protein_coding	130440934,130427955,130416919,130412179,130411122,130404564,130402648,130401881,130400707,130400039,130393771	130441237,130428018,130416966,130412240,130411191,130404708,130402799,130401948,130400821,130400254,130399039	Gene ID= ENSG00000106477.18 TPM= 2.34 Transcript Type= protein_coding
chr7	130419034	130441210	130419034	130441210	-	ENST00000616628.1@CEP41	ENST00000616628.1	protein_coding	130440934,130427955,130419034	130441210,130428018,130422007	Gene ID= ENSG00000106477.18 TPM= 1.17 Transcript Type= protein_coding
chr7	130486171	130506292	130486171	130506292	+	ENST00000341441.9@MEST	ENST00000341441.9	protein_coding	130486171,130495368,130497156,130497936,130498139,130498419,130499875,130500462,130500789,130502644,130503933,130504939	130486395,130495522,130497235,130498013,130498275,130498477,130499915,130500532,130500890,130502720,130503996,130506292	Gene ID= ENSG00000106484.14 TPM= 4.9 Transcript Type= protein_coding
chr7	130492083	130506292	130492083	130506292	+	transcript5652.chr7.nic@MEST	transcript5652.chr7.nic	protein_coding	130492083,130495368,130497156,130497936,130498139,130498419,130499875,130500462,130502644,130503933,130504939	130492339,130495522,130497235,130498013,130498275,130498477,130499915,130500532,130502720,130503996,130506292	Gene ID= ENSG00000106484.14 TPM= 4.9 Transcript Type= NA
chr7	130486354	130506292	130486354	130506292	+	ENST00000416162.6@MEST	ENST00000416162.6	protein_coding	130486354,130495368,130497156,130497936,130498139,130498419,130499875,130500462,130502644,130503933,130504939	130486395,130495522,130497235,130498013,130498275,130498477,130499915,130500532,130502720,130503996,130506292	Gene ID= ENSG00000106484.14 TPM= 1.4 Transcript Type= protein_coding
chr7	130492093	130506292	130492093	130506292	+	ENST00000223215.8@MEST	ENST00000223215.8	protein_coding	130492093,130495368,130497156,130497936,130498139,130498419,130499875,130500462,130500789,130502644,130503933,130504939	130492339,130495522,130497235,130498013,130498275,130498477,130499915,130500532,130500890,130502720,130503996,130506292	Gene ID= ENSG00000106484.14 TPM= 105.32 Transcript Type= protein_coding
chr7	130506238	130668748	130506238	130668748	-	ENST00000425248.5@COPG2	ENST00000425248.5	protein_coding	130668632,130667482,130666849,130662967,130652869,130616990,130613544,130612152,130610953,130564260,130563269,130561033,130555037,130554481,130552355,130551241,130550524,130549314,130548403,130547674,130508562,130507685,130507274,130506238	130668748,130667534,130666929,130663038,130652948,130617065,130613636,130612238,130611110,130564393,130563336,130561221,130555132,130554724,130552430,130551344,130550649,130549376,130548542,130547845,130508659,130507823,130507372,130506806	Gene ID= ENSG00000158623.14 TPM= 7.01 Transcript Type= protein_coding
chr7	130506238	130668741	130506238	130668741	-	transcript5653.chr7.nnic@COPG2	transcript5653.chr7.nnic	protein_coding	130668632,130667482,130666849,130662967,130652869,130616990,130613544,130612152,130610953,130506238	130668741,130667534,130666929,130663038,130652948,130617065,130613636,130612238,130611110,130506299	Gene ID= ENSG00000158623.14 TPM= 2.34 Transcript Type= NA
chr7	130892986	130895056	130892986	130895056	-	transcript5675.chr7.nnic@NA	transcript5675.chr7.nnic	NA	130892986	130895056	Gene ID= novel_gene_chr7_5676 TPM= 2.34 Transcript Type= NA
chr7	130939900	130940473	130939900	130940473	+	transcript5667.chr7.nnic@NA	transcript5667.chr7.nnic	NA	130939900	130940473	Gene ID= novel_gene_chr7_5668 TPM= 4.67 Transcript Type= NA
chr7	130960492	130962882	130960492	130962882	+	transcript5669.chr7.nnic@NA	transcript5669.chr7.nnic	NA	130960492	130962882	Gene ID= novel_gene_chr7_5670 TPM= 3.5 Transcript Type= NA
chr7	130961627	130965500	130961627	130965500	+	transcript5671.chr7.nnic@NA	transcript5671.chr7.nnic	NA	130961627	130965500	Gene ID= novel_gene_chr7_5672 TPM= 3.5 Transcript Type= NA
chr7	131094546	131099954	131094546	131099954	+	transcript5665.chr7.nnic@NA	transcript5665.chr7.nnic	NA	131094546	131099954	Gene ID= novel_gene_chr7_5666 TPM= 3.5 Transcript Type= NA
chr7	131104033	131107340	131104033	131107340	+	transcript5673.chr7.nnic@NA	transcript5673.chr7.nnic	NA	131104033	131107340	Gene ID= novel_gene_chr7_5674 TPM= 4.67 Transcript Type= NA
chr7	131327860	131496636	131327860	131496636	+	ENST00000352689.10@MKLN1	ENST00000352689.10	protein_coding	131327860,131375424,131387120,131388884,131397267,131399241,131411306,131414645,131429033,131437785,131443481,131445774,131463217,131464294,131466276,131470842,131478623,131487607	131327997,131375493,131387262,131388972,131397376,131399433,131411383,131414710,131429145,131437997,131443702,131445903,131463364,131464408,131466415,131470944,131478677,131496636	Gene ID= ENSG00000128585.17 TPM= 23.35 Transcript Type= protein_coding
chr7	131327869	131472975	131327869	131472975	+	transcript5687.chr7.nic@MKLN1	transcript5687.chr7.nic	protein_coding	131327869,131375424,131387120,131388884,131397267,131399241,131411306,131414645,131429033,131437785,131443481,131445774,131463217,131464294,131466276,131470842	131327997,131375493,131387262,131388972,131397376,131399433,131411383,131414710,131429145,131437997,131443702,131445903,131463364,131464408,131466415,131472975	Gene ID= ENSG00000128585.17 TPM= 4.67 Transcript Type= NA
chr7	131327869	131417003	131327869	131417003	+	transcript5692.chr7.nic@MKLN1	transcript5692.chr7.nic	protein_coding	131327869,131375424,131387120,131388884,131397267,131399241,131411306,131414645	131327997,131375493,131387262,131388972,131397376,131399433,131411383,131417003	Gene ID= ENSG00000128585.17 TPM= 3.5 Transcript Type= NA
chr7	131327897	131487962	131327897	131487962	+	ENST00000458153.5@MKLN1	ENST00000458153.5	protein_coding	131327897,131375424,131387120,131388884,131397267,131399238,131411306,131414645,131429033,131437785,131443481,131445774,131463217,131464294,131466276,131470842,131478623,131487607	131327997,131375493,131387262,131388972,131397376,131399433,131411383,131414710,131429145,131437997,131443702,131445903,131463364,131464408,131466415,131470944,131478677,131487962	Gene ID= ENSG00000128585.17 TPM= 15.18 Transcript Type= nonsense_mediated_decay
chr7	131500262	131556563	131500262	131556563	-	ENST00000446198.5@PODXL	ENST00000446198.5	protein_coding	131556260,131510828,131508951,131506579,131506260,131505868,131500262	131556563,131511433,131509585,131506726,131506321,131506035,131504508	Gene ID= ENSG00000128567.16 TPM= 151.79 Transcript Type= nonsense_mediated_decay
chr7	131549064	131551948	131549064	131551948	+	transcript5701.chr7.nnic@NA	transcript5701.chr7.nnic	NA	131549064	131551948	Gene ID= novel_gene_chr7_5702 TPM= 3.5 Transcript Type= NA
chr7	132128258	132179820	132128258	132179820	-	transcript5703.chr7.nic@PLXNA4	transcript5703.chr7.nic	protein_coding	132179687,132174778,132168304,132165134,132164142,132159473,132148543,132147900,132146510,132145119,132140599,132133049,132128258	132179820,132174920,132168572,132165200,132164288,132159632,132148646,132147999,132146700,132145288,132140811,132133199,132130574	Gene ID= ENSG00000221866.9 TPM= 2.34 Transcript Type= NA
chr7	132383488	132576470	132383488	132576470	-	ENST00000423507.6@PLXNA4	ENST00000423507.6	protein_coding	132576422,132507506,132489292,132383488	132576470,132508779,132489474,132385295	Gene ID= ENSG00000221866.9 TPM= 1.17 Transcript Type= protein_coding
chr7	132784868	133082082	132784868	133082082	-	ENST00000262570.9@CHCHD3	ENST00000262570.9	protein_coding	133081857,133070142,133024546,132975169,132885662,132838399,132796442,132784868	133082082,133070229,133024627,132975286,132885745,132838469,132796577,132785660	Gene ID= ENSG00000106554.12 TPM= 71.22 Transcript Type= protein_coding
chr7	133058013	133061480	133058013	133061480	+	transcript5709.chr7.nnic@NA	transcript5709.chr7.nnic	NA	133058013	133061480	Gene ID= novel_gene_chr7_5710 TPM= 2.34 Transcript Type= NA
chr7	133253073	134065759	133253073	134065759	+	ENST00000253861.4@EXOC4	ENST00000253861.4	protein_coding	133253073,133274982,133288922,133305877,133317284,133356330,133374828,133475328,133480050,133630045,133817325,133895599,133917583,133937891,133997492,134004912,134007676,134064291	133253187,133275171,133289116,133306061,133317390,133356573,133375002,133475473,133480138,133630141,133817544,133895735,133917738,133938069,133997633,134005090,134007835,134065759	Gene ID= ENSG00000131558.14 TPM= 74.73 Transcript Type= protein_coding
chr7	133253095	133481078	133253095	133481078	+	ENST00000462055.5@EXOC4	ENST00000462055.5	protein_coding	133253095,133274982,133288922,133305877,133317284,133356330,133374828,133475328,133480050	133253187,133275171,133289116,133306061,133317390,133356573,133375002,133475473,133481078	Gene ID= ENSG00000131558.14 TPM= 7.01 Transcript Type= retained_intron
chr7	134314541	134316964	134314541	134316964	-	transcript5725.chr7.nnic@NA	transcript5725.chr7.nnic	NA	134314541	134316964	Gene ID= novel_gene_chr7_5726 TPM= 2.34 Transcript Type= NA
chr7	134442350	134459100	134442350	134459100	-	transcript5737.chr7.nic@AKR1B1	transcript5737.chr7.nic	protein_coding	134458997,134450786,134449720,134448997,134448387,134447298,134445238,134442350	134459100,134451753,134449797,134449119,134448493,134448061,134445320,134442770	Gene ID= ENSG00000085662.13 TPM= 3.5 Transcript Type= NA
chr7	134442350	134459142	134442350	134459142	-	ENST00000285930.8@AKR1B1	ENST00000285930.8	protein_coding	134458997,134451586,134450786,134449720,134448997,134448387,134447980,134447298,134445238,134442350	134459142,134451753,134450902,134449797,134449119,134448493,134448061,134447381,134445320,134442770	Gene ID= ENSG00000085662.13 TPM= 141.28 Transcript Type= protein_coding
chr7	134442387	134459102	134442387	134459102	-	ENST00000465351.5@AKR1B1	ENST00000465351.5	protein_coding	134458997,134451586,134450786,134449720,134448997,134448387,134447298,134445238,134442387	134459102,134451753,134450902,134449797,134449119,134448493,134448061,134445320,134442770	Gene ID= ENSG00000085662.13 TPM= 4.67 Transcript Type= retained_intron
chr7	134646808	134679813	134646808	134679813	+	ENST00000344924.7@BPGM	ENST00000344924.7	protein_coding	134646808,134661447,134678853	134646937,134662108,134679813	Gene ID= ENSG00000172331.11 TPM= 25.69 Transcript Type= protein_coding
chr7	134646831	134679813	134646831	134679813	+	ENST00000393132.2@BPGM	ENST00000393132.2	protein_coding	134646831,134658348,134661447,134678853	134646937,134658668,134662108,134679813	Gene ID= ENSG00000172331.11 TPM= 3.5 Transcript Type= protein_coding
chr7	134658894	134661871	134658894	134661871	-	transcript5746.chr7.nnic@NA	transcript5746.chr7.nnic	NA	134658894	134661871	Gene ID= novel_gene_chr7_5747 TPM= 2.34 Transcript Type= NA
chr7	134779678	134970641	134779678	134970641	+	ENST00000361901.6@CALD1	ENST00000361901.6	protein_coding	134779678,134843884,134867693,134928754,134932988,134941092,134947508,134950374,134958069,134958209,134959974,134960533,134965306,134968340	134779749,134843971,134867804,134928900,134933390,134941237,134947769,134950514,134958112,134958290,134960111,134960628,134965386,134970641	Gene ID= ENSG00000122786.19 TPM= 287.39 Transcript Type= protein_coding
chr7	134986548	135012511	134986548	135012511	+	ENST00000476700.5@AGBL3	ENST00000476700.5	protein_coding	134986548,134987889,134989250,134993493,135010042	134986701,134987996,134989310,134993678,135012511	Gene ID= ENSG00000146856.14 TPM= 2.34 Transcript Type= retained_intron
chr7	134986513	134989685	134986513	134989685	+	transcript5797.chr7.nnic@NA	transcript5797.chr7.nnic	NA	134986513	134989685	Gene ID= novel_gene_chr7_5798 TPM= 8.17 Transcript Type= NA
chr7	135161314	135170810	135161314	135170810	-	transcript5799.chr7.nic@C7orf49	transcript5799.chr7.nic	protein_coding	135170652,135168749,135167732,135161314	135170810,135169060,135167807,135166871	Gene ID= ENSG00000122783.16 TPM= 8.17 Transcript Type= NA
chr7	135165785	135170730	135165785	135170730	-	transcript5809.chr7.nic@C7orf49	transcript5809.chr7.nic	protein_coding	135170399,135168969,135167732,135165785	135170730,135169060,135167807,135166871	Gene ID= ENSG00000122783.16 TPM= 2.8 Transcript Type= NA
chr7	135165829	135170795	135165829	135170795	-	ENST00000430372.1@C7orf49	ENST00000430372.1	protein_coding	135170652,135168745,135167732,135165829	135170795,135169060,135167807,135166871	Gene ID= ENSG00000122783.16 TPM= 16.35 Transcript Type= protein_coding
chr7	135165782	135170524	135165782	135170524	-	ENST00000617987.1@C7orf49	ENST00000617987.1	protein_coding	135170276,135168749,135167732,135165782	135170524,135169060,135167807,135166871	Gene ID= ENSG00000122783.16 TPM= 2.8 Transcript Type= protein_coding
chr7	135165785	135170661	135165785	135170661	-	ENST00000424142.5@C7orf49	ENST00000424142.5	protein_coding	135170399,135168749,135167732,135165785	135170661,135169060,135167807,135166871	Gene ID= ENSG00000122783.16 TPM= 6.31 Transcript Type= protein_coding
chr7	135165785	135170695	135165785	135170695	-	ENST00000393114.7@C7orf49	ENST00000393114.7	protein_coding	135170652,135168786,135167732,135165785	135170695,135169060,135167807,135166871	Gene ID= ENSG00000122783.16 TPM= 2.8 Transcript Type= protein_coding
chr7	135170528	135171696	135170528	135171696	+	transcript5814.chr7.nnic@NA	transcript5814.chr7.nnic	NA	135170528	135171696	Gene ID= novel_gene_chr7_5815 TPM= 2.34 Transcript Type= NA
chr7	135173643	135177229	135173643	135177229	-	transcript5816.chr7.nnic@NA	transcript5816.chr7.nnic	NA	135173643	135177229	Gene ID= novel_gene_chr7_5817 TPM= 4.67 Transcript Type= NA
chr7	135183839	135211534	135183839	135211534	-	ENST00000354475.4@WDR91	ENST00000354475.4	protein_coding	135211380,135209576,135208791,135207120,135205928,135204268,135197993,135196144,135194934,135193578,135193231,135189344,135188433,135186972,135183839	135211534,135209755,135208998,135207202,135206058,135204433,135198151,135196337,135195084,135193672,135193399,135189452,135188545,135187169,135186315	Gene ID= ENSG00000105875.13 TPM= 1.17 Transcript Type= protein_coding
chr7	135185782	135211534	135185782	135211534	-	ENST00000466182.5@WDR91	ENST00000466182.5	protein_coding	135211380,135209576,135208791,135207120,135205928,135204268,135197044,135196144,135194934,135193578,135193231,135189344,135188433,135186972,135185782	135211534,135209755,135208998,135207202,135206058,135204433,135198151,135196337,135195084,135193672,135193399,135189452,135188545,135187169,135186315	Gene ID= ENSG00000105875.13 TPM= 1.17 Transcript Type= retained_intron
chr7	135361795	135510127	135361795	135510127	-	ENST00000541284.5@CNOT4	ENST00000541284.5	protein_coding	135509889,135438158,135422156,135415176,135414331,135413488,135410515,135398169,135395634,135393918,135363854,135361795	135510127,135438423,135422353,135415262,135414432,135413613,135410648,135398226,135395883,135394415,135364066,135363186	Gene ID= ENSG00000080802.18 TPM= 1.75 Transcript Type= protein_coding
chr7	135387070	135510127	135387070	135510127	-	ENST00000315544.6@CNOT4	ENST00000315544.6	protein_coding	135509889,135438158,135422156,135415176,135414331,135413488,135410515,135398169,135395634,135393918,135387070	135510127,135438423,135422353,135415262,135414432,135413613,135410648,135398226,135395883,135394415,135388894	Gene ID= ENSG00000080802.18 TPM= 1.17 Transcript Type= protein_coding
chr7	135408910	135510131	135408910	135510131	-	transcript5839.chr7.nic@CNOT4	transcript5839.chr7.nic	protein_coding	135509889,135438158,135422156,135415176,135414331,135413488,135408910	135510131,135438423,135422353,135415262,135414432,135413613,135410648	Gene ID= ENSG00000080802.18 TPM= 3.5 Transcript Type= NA
chr7	135361795	135510080	135361795	135510080	-	ENST00000451834.5@CNOT4	ENST00000451834.5	protein_coding	135509889,135438158,135422156,135415176,135414331,135413488,135410524,135398169,135395634,135393918,135363854,135361795	135510080,135438423,135422353,135415262,135414432,135413613,135410648,135398226,135395883,135394415,135364066,135363186	Gene ID= ENSG00000080802.18 TPM= 1.75 Transcript Type= protein_coding
chr7	135386151	135510076	135386151	135510076	-	ENST00000428680.6@CNOT4	ENST00000428680.6	protein_coding	135509889,135438158,135422156,135415176,135414331,135413488,135410524,135398169,135395634,135393918,135386151	135510076,135438423,135422353,135415262,135414432,135413613,135410648,135398226,135395883,135394415,135388894	Gene ID= ENSG00000080802.18 TPM= 2.34 Transcript Type= protein_coding
chr7	135418148	135419901	135418148	135419901	+	transcript5842.chr7.nnic@NA	transcript5842.chr7.nnic	NA	135418148	135419901	Gene ID= novel_gene_chr7_5843 TPM= 2.34 Transcript Type= NA
chr7	135557913	135648749	135557913	135648749	+	transcript5845.chr7.nnic@NUP205	transcript5845.chr7.nnic	protein_coding	135557913,135571105,135573654,135576270,135576969,135577796,135578751,135584832,135587575,135587855,135591450,135592987,135594547,135597368,135597998,135600870,135601370,135602805,135604340,135606145,135606751,135607247,135614159,135615916,135616655,135617090,135617602,135618412,135619423,135619790,135622777,135625164,135626240,135627973,135630344,135635581,135637931,135638557,135643192,135644895,135645468,135646158,135648404	135557972,135571247,135573825,135576414,135577128,135578024,135578930,135585007,135587691,135587992,135591600,135593192,135594729,135597418,135598207,135600969,135601507,135602994,135604460,135606226,135606915,135607371,135614273,135616065,135616726,135617247,135617682,135618603,135619690,135619888,135622925,135625355,135626361,135628111,135630470,135635657,135638059,135638683,135643358,135645018,135645596,135646231,135648749	Gene ID= ENSG00000155561.14 TPM= 5.25 Transcript Type= NA
chr7	135557919	135648757	135557919	135648757	+	ENST00000285968.10@NUP205	ENST00000285968.10	protein_coding	135557919,135571105,135573654,135576270,135576969,135577796,135578751,135584832,135587575,135587855,135591450,135592987,135594547,135597368,135597998,135600870,135601370,135602805,135604340,135606145,135606751,135607247,135614159,135615916,135616655,135617090,135617602,135618412,135619423,135619790,135622777,135625164,135626240,135627973,135630344,135635581,135637931,135638557,135643192,135644895,135645468,135646158,135648404	135557972,135571247,135573825,135576414,135577128,135578024,135578915,135585007,135587691,135587992,135591600,135593192,135594729,135597418,135598207,135600969,135601507,135602994,135604460,135606226,135606915,135607371,135614273,135616065,135616726,135617247,135617682,135618603,135619690,135619888,135622925,135625355,135626361,135628111,135630470,135635657,135638059,135638683,135643358,135645018,135645596,135646231,135648757	Gene ID= ENSG00000155561.14 TPM= 21.6 Transcript Type= protein_coding
chr7	135662486	135693541	135662486	135693541	+	transcript5847.chr7.nnic@C7orf73	transcript5847.chr7.nnic	protein_coding	135662486,135672753,135674091,135678096,135688904,135691571	135662594,135672806,135675825,135678219,135689028,135693541	Gene ID= ENSG00000243317.7 TPM= 2.34 Transcript Type= NA
chr7	135662521	135676412	135662521	135676412	+	ENST00000507606.2@C7orf73	ENST00000507606.2	protein_coding	135662521,135672753,135674091	135662594,135672806,135676412	Gene ID= ENSG00000243317.7 TPM= 11.68 Transcript Type= protein_coding
chr7	135729605	135732560	135729605	135732560	-	transcript5860.chr7.nnic@NA	transcript5860.chr7.nnic	NA	135729605	135732560	Gene ID= novel_gene_chr7_5861 TPM= 5.84 Transcript Type= NA
chr7	135926761	135977316	135926761	135977316	-	ENST00000393085.3@MTPN	ENST00000393085.3	protein_coding	135977029,135951517,135950599,135926761	135977316,135951630,135950682,135930012	Gene ID= ENSG00000105887.10 TPM= 26.85 Transcript Type= protein_coding
chr7	137227341	137343865	137227341	137343865	-	ENST00000348225.6@PTN	ENST00000348225.6	protein_coding	137343439,137254859,137253464,137251230,137227341	137343865,137254974,137253637,137251391,137228075	Gene ID= ENSG00000105894.11 TPM= 7.01 Transcript Type= protein_coding
chr7	137513859	137513933	137513859	137513933	+	ENST00000623936.2@AC090498.1	ENST00000623936.2	processed_pseudogene	137513859	137513933	Gene ID= ENSG00000279483.2 TPM= 2.34 Transcript Type= processed_pseudogene
chr7	137882801	137884389	137882801	137884389	+	transcript5875.chr7.nnic@NA	transcript5875.chr7.nnic	NA	137882801	137884389	Gene ID= novel_gene_chr7_5876 TPM= 2.34 Transcript Type= NA
chr7	138460435	138585585	138460435	138585585	+	ENST00000415680.6@TRIM24	ENST00000415680.6	protein_coding	138460435,138504290,138515212,138519189,138525241,138529116,138538657,138551063,138554698,138567481,138570830,138573507,138576373,138577420,138579204,138580562,138581697,138583850,138584742	138460912,138504408,138515359,138519321,138525357,138529230,138538803,138551180,138554864,138567654,138571003,138573642,138576445,138577588,138579532,138580694,138581771,138583999,138585585	Gene ID= ENSG00000122779.17 TPM= 9.34 Transcript Type= protein_coding
chr7	138706295	138798196	138706295	138798196	-	ENST00000310018.6@ATP6V0A4	ENST00000310018.6	protein_coding	138798034,138786158,138771131,138769173,138768780,138762900,138762340,138759752,138756458,138755689,138752625,138749167,138747425,138745123,138739540,138734136,138732877,138728761,138721897,138715764,138709624,138706295	138798196,138786260,138771264,138769251,138768874,138763025,138762434,138759878,138756540,138755782,138752837,138749317,138747564,138745280,138739633,138734254,138733093,138728862,138722025,138715881,138709795,138706717	Gene ID= ENSG00000105929.15 TPM= 2.34 Transcript Type= protein_coding
chr7	138797952	138806759	138797952	138806759	+	ENST00000442682.6@TMEM213	ENST00000442682.6	protein_coding	138797952,138801327,138802900	138798186,138801398,138806759	Gene ID= ENSG00000214128.10 TPM= 9.34 Transcript Type= protein_coding
chr7	138797952	138803748	138797952	138803748	+	ENST00000397602.7@TMEM213	ENST00000397602.7	protein_coding	138797952,138801330,138802900	138798186,138801398,138803748	Gene ID= ENSG00000214128.10 TPM= 4.67 Transcript Type= protein_coding
chr7	139021497	139023631	139021497	139023631	-	transcript5893.chr7.nnic@NA	transcript5893.chr7.nnic	NA	139021497	139023631	Gene ID= novel_gene_chr7_5894 TPM= 4.67 Transcript Type= NA
chr7	139023208	139025443	139023208	139025443	+	transcript5891.chr7.nnic@NA	transcript5891.chr7.nnic	NA	139023208	139025443	Gene ID= novel_gene_chr7_5892 TPM= 2.34 Transcript Type= NA
chr7	139060338	139109719	139060338	139109719	-	ENST00000471652.1@ZC3HAV1	ENST00000471652.1	protein_coding	139109024,139089624,139083780,139079470,139078552,139076286,139073856,139064879,139060338	139109719,139089759,139084032,139080243,139078653,139076409,139074030,139064999,139061138	Gene ID= ENSG00000105939.12 TPM= 10.51 Transcript Type= protein_coding
chr7	139133763	139191986	139133763	139191986	+	transcript5908.chr7.nic@TTC26	transcript5908.chr7.nic	protein_coding	139133763,139134655,139137847,139139890,139142256,139160948,139165132,139166840,139168344,139169289,139178214,139178515,139179574,139181092,139187406,139189321	139133860,139134792,139137939,139140004,139142305,139161022,139165234,139166895,139168397,139169352,139178302,139178598,139179643,139181198,139187539,139191986	Gene ID= ENSG00000105948.13 TPM= 2.34 Transcript Type= NA
chr7	139133778	139191986	139133778	139191986	+	ENST00000464848.5@TTC26	ENST00000464848.5	protein_coding	139133778,139134655,139137847,139139890,139142256,139147145,139148206,139160948,139165132,139166840,139168344,139169289,139178214,139178515,139179574,139181092,139187406,139189321	139133860,139134792,139137939,139140004,139142305,139147290,139148377,139161022,139165234,139166895,139168397,139169352,139178302,139178598,139179643,139181198,139187539,139191986	Gene ID= ENSG00000105948.13 TPM= 1.17 Transcript Type= protein_coding
chr7	139341132	139346319	139341132	139346319	+	ENST00000297534.6@FMC1	ENST00000297534.6	protein_coding	139341132,139345501	139341522,139346319	Gene ID= ENSG00000164898.12 TPM= 16.35 Transcript Type= protein_coding
chr7	139359881	139425492	139359881	139425492	+	transcript5923.chr7.nnic@LUC7L2	transcript5923.chr7.nnic	protein_coding	139359881,139376062,139398599,139402137,139405644,139407174,139409563,139412551,139417538,139422163,139425211	139360322,139376156,139398697,139402247,139405787,139407350,139409654,139412580,139417729,139424845,139425492	Gene ID= ENSG00000146963.17 TPM= 5.84 Transcript Type= NA
chr7	139359766	139419834	139359766	139419834	+	transcript5939.chr7.nic@LUC7L2	transcript5939.chr7.nic	protein_coding	139359766,139376062,139398599,139402137,139405644,139407174,139409563,139412551,139417538	139360322,139376156,139398697,139402247,139405787,139407350,139409654,139412580,139419834	Gene ID= ENSG00000146963.17 TPM= 30.36 Transcript Type= NA
chr7	139359908	139423452	139359908	139423452	+	ENST00000354926.8@LUC7L2	ENST00000354926.8	protein_coding	139359908,139376062,139398599,139402137,139405644,139407174,139409563,139412551,139417538,139422163	139360322,139376156,139398697,139402247,139405787,139407350,139409654,139412580,139417729,139423452	Gene ID= ENSG00000146963.17 TPM= 46.7 Transcript Type= protein_coding
chr7	139359912	139423151	139359912	139423151	+	ENST00000456182.5@LUC7L2	ENST00000456182.5	protein_coding	139359912,139374401,139376062,139398599,139402137,139405644,139407174,139409563,139412551,139417538,139422163	139360322,139374471,139376156,139398697,139402247,139405787,139407350,139409654,139412580,139417729,139423151	Gene ID= ENSG00000146963.17 TPM= 4.67 Transcript Type= nonsense_mediated_decay
chr7	139359876	139423151	139359876	139423151	+	transcript5925.chr7.nnic@C7orf55-LUC7L2	transcript5925.chr7.nnic	protein_coding	139359876,139363176,139376062,139398599,139402137,139405644,139407174,139409563,139412551,139417538,139422163	139360322,139363259,139376156,139398697,139402247,139405787,139407350,139409654,139412580,139417729,139423151	Gene ID= ENSG00000269955.2 TPM= 5.84 Transcript Type= NA
chr7	139450616	139483665	139450616	139483665	-	transcript5958.chr7.nnic@KLRG2	transcript5958.chr7.nnic	protein_coding	139482886,139480146,139479627,139454111,139452518,139450616	139483665,139480247,139479772,139454214,139453707,139451261	Gene ID= ENSG00000188883.4 TPM= 2.34 Transcript Type= NA
chr7	139626108	139778008	139626108	139778008	-	transcript5966.chr7.nic@HIPK2	transcript5966.chr7.nic	protein_coding	139777605,139715932,139631602,139631165,139628953,139626108	139778008,139717015,139631725,139631284,139629039,139626785	Gene ID= ENSG00000064393.15 TPM= 8.17 Transcript Type= NA
chr7	139561570	139777718	139561570	139777718	-	ENST00000406875.7@HIPK2	ENST00000406875.7	protein_coding	139777605,139715932,139631602,139631165,139628953,139626601,139620401,139614286,139613202,139604081,139600417,139596717,139583817,139575128,139561570	139777718,139717015,139631725,139631284,139629039,139626785,139620563,139614493,139613323,139604223,139600596,139596998,139584064,139575288,139573397	Gene ID= ENSG00000064393.15 TPM= 131.35 Transcript Type= protein_coding
chr7	139572629	139777778	139572629	139777778	-	ENST00000428878.6@HIPK2	ENST00000428878.6	protein_coding	139777605,139715932,139631602,139631165,139628953,139626601,139620401,139614286,139613202,139604081,139600417,139596717,139583817,139575128,139572629	139777778,139717015,139631725,139631284,139629039,139626785,139620563,139614412,139613323,139604223,139600596,139596998,139584064,139575288,139573397	Gene ID= ENSG00000064393.15 TPM= 20.43 Transcript Type= protein_coding
chr7	139778254	139797484	139778254	139797484	+	ENST00000474763.5@TBXAS1	ENST00000474763.5	protein_coding	139778254,139787338,139797210	139778471,139787426,139797484	Gene ID= ENSG00000059377.16 TPM= 1.17 Transcript Type= processed_transcript
chr7	139829214	139947578	139829214	139947578	+	transcript5979.chr7.nnic@TBXAS1	transcript5979.chr7.nnic	protein_coding	139829214,139872235,139875585,139911225,139936191,139945085	139829479,139872328,139875637,139911321,139936307,139947578	Gene ID= ENSG00000059377.16 TPM= 3.5 Transcript Type= NA
chr7	139829214	139939394	139829214	139939394	+	transcript5984.chr7.nic@TBXAS1	transcript5984.chr7.nic	protein_coding	139829214,139872235,139875585,139911225,139936191	139829479,139872328,139875637,139911321,139939394	Gene ID= ENSG00000059377.16 TPM= 4.67 Transcript Type= NA
chr7	139829224	140020293	139829224	140020293	+	ENST00000448866.5@TBXAS1	ENST00000448866.5	protein_coding	139829224,139872235,139875585,139911225,139936191,139953368,139955459,139957634,139961919,140007091,140015723,140017671,140020025	139829479,139872328,139875637,139911321,139936307,139953456,139955607,139957764,139962233,140007182,140015860,140017833,140020293	Gene ID= ENSG00000059377.16 TPM= 55.46 Transcript Type= protein_coding
chr7	139829264	140020325	139829264	140020325	+	ENST00000411653.5@TBXAS1	ENST00000411653.5	protein_coding	139829264,139872235,139875585,139911225,139936191,139953368,139955459,139957634,139961919,140007091,140015723,140020025	139829479,139872328,139875637,139911321,139936307,139953456,139955607,139957764,139962233,140007182,140015860,140020325	Gene ID= ENSG00000059377.16 TPM= 5.25 Transcript Type= protein_coding
chr7	139841484	139847423	139841484	139847423	-	transcript5986.chr7.nnic@NA	transcript5986.chr7.nnic	NA	139841484	139847423	Gene ID= novel_gene_chr7_5987 TPM= 4.67 Transcript Type= NA
chr7	140023744	140063721	140023744	140063721	-	ENST00000263549.7@PARP12	ENST00000263549.7	protein_coding	140062522,140057899,140056856,140054662,140046884,140041644,140037715,140034235,140028613,140027276,140026197,140023744	140063721,140058034,140057153,140054763,140047007,140041839,140037856,140034331,140028688,140027406,140026348,140024885	Gene ID= ENSG00000059378.12 TPM= 90.14 Transcript Type= protein_coding
chr7	140023749	140062963	140023749	140062963	-	transcript5995.chr7.nic@PARP12	transcript5995.chr7.nic	protein_coding	140062522,140057899,140056856,140054662,140046884,140041644,140037715,140034235,140028613,140027276,140026197,140023749	140062963,140058034,140057773,140054763,140047007,140041839,140037856,140034331,140028688,140027406,140026348,140024885	Gene ID= ENSG00000059378.12 TPM= 46.94 Transcript Type= NA
chr7	140023749	140062963	140023749	140062963	-	transcript5998.chr7.nnic@PARP12	transcript5998.chr7.nnic	protein_coding	140062522,140057899,140056856,140054662,140046884,140037715,140034235,140028613,140027276,140026197,140023749	140062963,140058034,140057773,140054763,140047007,140037856,140034331,140028688,140027406,140026348,140024885	Gene ID= ENSG00000059378.12 TPM= 6.07 Transcript Type= NA
chr7	140023749	140062963	140023749	140062963	-	transcript6001.chr7.nic@PARP12	transcript6001.chr7.nic	protein_coding	140062522,140057899,140056856,140054662,140046884,140041644,140034235,140028613,140027276,140026197,140023749	140062963,140058034,140057773,140054763,140047007,140041839,140034331,140028688,140027406,140026348,140024885	Gene ID= ENSG00000059378.12 TPM= 14.01 Transcript Type= NA
chr7	140023749	140062933	140023749	140062933	-	ENST00000473341.5@PARP12	ENST00000473341.5	protein_coding	140062522,140057899,140056856,140054662,140046884,140041644,140034235,140028613,140027276,140026197,140023749	140062933,140058034,140057153,140054763,140047007,140041839,140034331,140028688,140027406,140026348,140024885	Gene ID= ENSG00000059378.12 TPM= 4.09 Transcript Type= nonsense_mediated_decay
chr7	140084746	140177035	140084746	140177035	-	ENST00000397560.6@KDM7A	ENST00000397560.6	protein_coding	140176744,140139105,140133539,140129493,140127442,140126637,140124621,140120442,140119113,140113491,140111095,140101951,140099899,140098879,140097545,140096899,140096555,140094056,140091804,140084746	140177035,140139190,140133656,140129653,140127583,140126823,140124783,140120529,140119219,140113582,140111184,140102160,140100023,140099033,140097642,140097047,140096763,140094138,140092077,140091188	Gene ID= ENSG00000006459.10 TPM= 8.17 Transcript Type= protein_coding
chr7	140177261	140179640	140177261	140179640	+	ENST00000566699.1@JHDM1D-AS1	ENST00000566699.1	antisense_RNA	140177261	140179640	Gene ID= ENSG00000260231.1 TPM= 5.84 Transcript Type= antisense_RNA
chr7	140333752	140398536	140333752	140398536	-	transcript6017.chr7.nnic@SLC37A3	transcript6017.chr7.nnic	protein_coding	140398416,140382438,140380282,140369590,140364408,140360221,140358640,140355668,140352062,140351273,140348626,140345869,140345216,140343412,140337284,140333752	140398536,140382596,140380390,140369682,140364491,140360336,140358785,140355764,140352146,140351451,140348767,140345970,140345263,140343563,140337349,140335504	Gene ID= ENSG00000157800.17 TPM= 3.86 Transcript Type= NA
chr7	140333752	140398536	140333752	140398536	-	transcript6018.chr7.nic@SLC37A3	transcript6018.chr7.nic	protein_coding	140398416,140382438,140380282,140379214,140369590,140364408,140358640,140355668,140352062,140351273,140348626,140345869,140345216,140343412,140337284,140333752	140398536,140382596,140380390,140379307,140369682,140364491,140358785,140355764,140352146,140351451,140348767,140345970,140345263,140343563,140337349,140335504	Gene ID= ENSG00000157800.17 TPM= 3.28 Transcript Type= NA
chr7	140333752	140398536	140333752	140398536	-	transcript6022.chr7.nic@SLC37A3	transcript6022.chr7.nic	protein_coding	140398416,140382438,140380282,140369590,140364408,140358640,140355668,140352062,140351273,140348626,140345869,140345216,140343412,140337284,140333752	140398536,140382596,140380390,140369682,140364491,140358785,140355764,140352146,140351451,140348767,140345970,140345263,140343563,140337349,140335439	Gene ID= ENSG00000157800.17 TPM= 2.5 Transcript Type= NA
chr7	140333752	140398549	140333752	140398549	-	ENST00000326232.13@SLC37A3	ENST00000326232.13	protein_coding	140398416,140382438,140380282,140369590,140364408,140358640,140355668,140352062,140351273,140348626,140345869,140345216,140343412,140337284,140333752	140398549,140382596,140380390,140369682,140364491,140358785,140355764,140352146,140351451,140348767,140345970,140345263,140343563,140337349,140335504	Gene ID= ENSG00000157800.17 TPM= 61.66 Transcript Type= protein_coding
chr7	140333752	140398536	140333752	140398536	-	transcript6034.chr7.nic@SLC37A3	transcript6034.chr7.nic	protein_coding	140398416,140382438,140380282,140369590,140364408,140358640,140355668,140352062,140351273,140348626,140345869,140337284,140333752	140398536,140382596,140380390,140369682,140364491,140358785,140355764,140352146,140351451,140348767,140345970,140337349,140335504	Gene ID= ENSG00000157800.17 TPM= 3.86 Transcript Type= NA
chr7	140333752	140398536	140333752	140398536	-	transcript6035.chr7.nic@SLC37A3	transcript6035.chr7.nic	protein_coding	140398416,140382438,140380282,140369590,140364408,140358640,140355668,140352062,140351273,140348626,140345869,140337284,140333752	140398536,140382596,140380390,140369682,140364491,140358785,140355764,140352146,140351969,140348767,140345970,140337349,140335504	Gene ID= ENSG00000157800.17 TPM= 2.7 Transcript Type= NA
chr7	140333752	140398457	140333752	140398457	-	ENST00000340308.7@SLC37A3	ENST00000340308.7	protein_coding	140398416,140382438,140380282,140369590,140364408,140358640,140355668,140352062,140351273,140348626,140337284,140333752	140398457,140382596,140380390,140369682,140364491,140358785,140355764,140352146,140351451,140348767,140337349,140335504	Gene ID= ENSG00000157800.17 TPM= 1.53 Transcript Type= protein_coding
chr7	140342968	140347770	140342968	140347770	+	transcript6042.chr7.nnic@NA	transcript6042.chr7.nnic	NA	140342968	140347770	Gene ID= novel_gene_chr7_6043 TPM= 3.5 Transcript Type= NA
chr7	140453047	140479364	140453047	140479364	-	transcript6045.chr7.nic@MKRN1	transcript6045.chr7.nic	protein_coding	140479160,140474381,140471883,140459707,140459007,140456652,140455790,140455095,140453047	140479364,140474489,140472011,140459936,140459233,140456866,140455900,140455233,140454729	Gene ID= ENSG00000133606.10 TPM= 14.3 Transcript Type= NA
chr7	140453040	140479569	140453040	140479569	-	ENST00000255977.6@MKRN1	ENST00000255977.6	protein_coding	140479160,140471883,140459707,140459007,140456652,140455790,140455095,140453040	140479569,140472011,140459936,140459233,140456866,140455900,140455233,140454729	Gene ID= ENSG00000133606.10 TPM= 286.35 Transcript Type= protein_coding
chr7	140453047	140479336	140453047	140479336	-	ENST00000475010.5@MKRN1	ENST00000475010.5	protein_coding	140479160,140471883,140459707,140459007,140456652,140455095,140453047	140479336,140472011,140459936,140459233,140456866,140455900,140454729	Gene ID= ENSG00000133606.10 TPM= 4.96 Transcript Type= retained_intron
chr7	140456192	140479499	140456192	140479499	-	ENST00000443720.6@MKRN1	ENST00000443720.6	protein_coding	140479160,140471883,140459707,140459007,140456192	140479499,140472011,140459936,140459233,140456866	Gene ID= ENSG00000133606.10 TPM= 26.85 Transcript Type= protein_coding
chr7	140518420	140640322	140518420	140640322	-	transcript6066.chr7.nnic@DENND2A	transcript6066.chr7.nnic	protein_coding	140640009,140605705,140601403,140587653,140585589,140573808,140569645,140568763,140567086,140559708,140558143,140555636,140546799,140544618,140527318,140525751,140523307,140521855,140519632,140518420	140640322,140605806,140602542,140587780,140585710,140574008,140569738,140568813,140567273,140559817,140558212,140555713,140546939,140544766,140527495,140525792,140523424,140522100,140519718,140518738	Gene ID= ENSG00000146966.12 TPM= 3.5 Transcript Type= NA
chr7	140518420	140640776	140518420	140640776	-	ENST00000275884.10@DENND2A	ENST00000275884.10	protein_coding	140640504,140601403,140587653,140585589,140573808,140569645,140568763,140567086,140559708,140558143,140555636,140546799,140544618,140527318,140525751,140523307,140521855,140519632,140518420	140640776,140602542,140587780,140585710,140574008,140569738,140568813,140567273,140559817,140558212,140555713,140546939,140544766,140527495,140525792,140523424,140522100,140519718,140518738	Gene ID= ENSG00000146966.12 TPM= 39.7 Transcript Type= protein_coding
chr7	140672891	140695121	140672891	140695121	+	transcript6080.chr7.nnic@ADCK2	transcript6080.chr7.nnic	protein_coding	140672891,140674611,140679155,140681042,140689597,140690760,140694663	140674263,140674757,140679283,140681137,140689725,140690813,140695121	Gene ID= ENSG00000133597.10 TPM= 5.84 Transcript Type= NA
chr7	140673153	140695121	140673153	140695121	+	ENST00000072869.8@ADCK2	ENST00000072869.8	protein_coding	140673153,140674611,140679155,140681042,140686990,140689597,140690760,140694663	140674263,140674757,140679283,140681137,140687241,140689725,140690813,140695121	Gene ID= ENSG00000133597.10 TPM= 21.02 Transcript Type= protein_coding
chr7	140696672	140706646	140696672	140706646	+	ENST00000247866.8@NDUFB2	ENST00000247866.8	protein_coding	140696672,140702866,140704860,140706563	140696842,140703010,140704963,140706646	Gene ID= ENSG00000090266.12 TPM= 135.44 Transcript Type= protein_coding
chr7	140696671	140722790	140696671	140722790	+	ENST00000476279.5@NDUFB2	ENST00000476279.5	protein_coding	140696671,140702866,140704860,140721552	140696842,140703010,140704969,140722790	Gene ID= ENSG00000090266.12 TPM= 3.5 Transcript Type= protein_coding
chr7	140697224	140706644	140697224	140706644	+	ENST00000471136.5@NDUFB2	ENST00000471136.5	protein_coding	140697224,140702866,140704860,140706563	140697391,140703010,140704963,140706644	Gene ID= ENSG00000090266.12 TPM= 3.5 Transcript Type= protein_coding
chr7	140695756	140697703	140695756	140697703	-	transcript6102.chr7.nnic@NA	transcript6102.chr7.nnic	NA	140695756	140697703	Gene ID= novel_gene_chr7_6103 TPM= 2.34 Transcript Type= NA
chr7	140725143	140924912	140725143	140924912	-	transcript6083.chr7.nic@BRAF	transcript6083.chr7.nic	protein_coding	140924566,140850111,140834609,140808892,140807960,140801412,140800362,140794308,140787548,140783021,140781576,140777991,140776912,140754187,140753275,140749287,140739812,140734617,140725143	140924912,140850212,140834872,140808995,140808062,140801560,140800481,140794467,140787584,140783157,140781693,140778075,140777088,140754233,140753393,140749418,140739946,140734770,140726516	Gene ID= ENSG00000157764.12 TPM= 2.34 Transcript Type= NA
chr7	140845403	140849530	140845403	140849530	+	transcript6100.chr7.nnic@NA	transcript6100.chr7.nnic	NA	140845403	140849530	Gene ID= novel_gene_chr7_6101 TPM= 4.67 Transcript Type= NA
chr7	141006169	141014966	141006169	141014966	-	ENST00000467334.1@MRPS33	ENST00000467334.1	protein_coding	141014911,141010419,141006169	141014966,141010617,141006535	Gene ID= ENSG00000090263.15 TPM= 3.5 Transcript Type= protein_coding
chr7	141006054	141014679	141006054	141014679	-	ENST00000393008.7@MRPS33	ENST00000393008.7	protein_coding	141014551,141010419,141006054	141014679,141010660,141006535	Gene ID= ENSG00000090263.15 TPM= 2.34 Transcript Type= protein_coding
chr7	141002610	141014983	141002610	141014983	-	ENST00000324787.9@MRPS33	ENST00000324787.9	protein_coding	141014911,141010419,141002610	141014983,141010660,141006535	Gene ID= ENSG00000090263.15 TPM= 11.68 Transcript Type= protein_coding
chr7	141551189	141655244	141551189	141655244	+	ENST00000355413.8@AGK	ENST00000355413.8	protein_coding	141551189,141555453,141593146,141596562,141601205,141611195,141614146,141615471,141621732,141633901,141636960,141641248,141641811,141649263,141651525,141652787	141551434,141555567,141593185,141596641,141601280,141611287,141614178,141615565,141621801,141633980,141637017,141641398,141641908,141649333,141651609,141655244	Gene ID= ENSG00000006530.15 TPM= 2.34 Transcript Type= protein_coding
chr7	141662920	141702166	141662920	141702166	-	transcript6123.chr7.nic@KIAA1147	transcript6123.chr7.nic	protein_coding	141701886,141686559,141685478,141674067,141666287,141665187,141664904,141662920	141702166,141686658,141685636,141674220,141666425,141665318,141665054,141664240	Gene ID= ENSG00000257093.6 TPM= 3.5 Transcript Type= NA
chr7	141669810	141702166	141669810	141702166	-	transcript6128.chr7.nic@KIAA1147	transcript6128.chr7.nic	protein_coding	141701886,141686559,141685478,141669810	141702166,141686658,141685636,141674220	Gene ID= ENSG00000257093.6 TPM= 2.34 Transcript Type= NA
chr7	141656728	141702153	141656728	141702153	-	ENST00000536163.5@KIAA1147	ENST00000536163.5	protein_coding	141701886,141686559,141685478,141674067,141666287,141665187,141664904,141664172,141656728	141702153,141686658,141685636,141674220,141666425,141665318,141665054,141664240,141662851	Gene ID= ENSG00000257093.6 TPM= 28.02 Transcript Type= protein_coding
chr7	141738321	141750461	141738321	141750461	+	ENST00000265304.10@SSBP1	ENST00000265304.10	protein_coding	141738321,141739124,141742169,141743561,141743902,141745496,141750311	141738410,141739190,141742229,141743701,141743989,141745584,141750461	Gene ID= ENSG00000106028.10 TPM= 33.86 Transcript Type= protein_coding
chr7	141738358	141741690	141738358	141741690	+	ENST00000496622.1@SSBP1	ENST00000496622.1	protein_coding	141738358,141739124	141738410,141741690	Gene ID= ENSG00000106028.10 TPM= 1.17 Transcript Type= retained_intron
chr7	141927357	141946983	141927357	141946983	-	ENST00000546910.5@CLEC5A	ENST00000546910.5	protein_coding	141946807,141946214,141945341,141943896,141935814,141931720,141927357	141946983,141946312,141945400,141943964,141935950,141931826,141930218	Gene ID= ENSG00000258227.6 TPM= 14.01 Transcript Type= protein_coding
chr7	142788495	142793368	142788495	142793368	+	transcript6157.chr7.nnic@AC245427.1	transcript6157.chr7.nnic	TR_C_gene	142788495,142791694,142792522,142792692,142793121	142788547,142792080,142792539,142792798,142793368	Gene ID= ENSG00000211751.9 TPM= 2.34 Transcript Type= NA
chr7	142796567	142799939	142796567	142799939	+	transcript6161.chr7.nnic@NA	transcript6161.chr7.nnic	NA	142796567	142799939	Gene ID= novel_gene_chr7_6162 TPM= 2.34 Transcript Type= NA
chr7	142796727	142802748	142796727	142802748	+	transcript6158.chr7.nnic@TRBC2	transcript6158.chr7.nnic	TR_C_gene	142796727,142801041,142801944,142802105,142802503	142796895,142801427,142801961,142802211,142802748	Gene ID= ENSG00000211772.11 TPM= 4.67 Transcript Type= NA
chr7	142801041	142802748	142801041	142802748	+	ENST00000466254.1@TRBC2	ENST00000466254.1	TR_C_gene	142801041,142801944,142802105,142802503	142801427,142801961,142802211,142802748	Gene ID= ENSG00000211772.11 TPM= 1.17 Transcript Type= TR_C_gene
chr7	142855059	142871094	142855059	142871094	+	transcript6164.chr7.nic@EPHB6	transcript6164.chr7.nic	protein_coding	142855059,142861052,142862017,142862756,142863127,142863631,142863966,142865475,142865960,142866481,142866906,142867608,142867997,142868241,142868492,142868974,142869817,142870214,142870530,142870796	142855385,142861186,142862133,142862833,142863327,142863695,142864749,142865630,142866316,142866605,142867068,142867722,142868049,142868360,142868739,142869147,142869966,142870407,142870685,142871094	Gene ID= ENSG00000106123.11 TPM= 16.64 Transcript Type= NA
chr7	142854915	142871094	142854915	142871094	+	transcript6166.chr7.nic@EPHB6	transcript6166.chr7.nic	protein_coding	142854915,142861052,142862017,142862756,142863127,142863631,142863966,142865475,142865960,142866906,142867608,142867997,142868241,142868492,142868974,142869817,142870214,142870530,142870796	142855385,142861186,142862133,142862833,142863327,142863695,142864749,142865630,142866605,142867068,142867722,142868049,142868360,142868739,142869147,142869966,142870407,142870685,142871094	Gene ID= ENSG00000106123.11 TPM= 2.63 Transcript Type= NA
chr7	142855061	142871094	142855061	142871094	+	ENST00000619012.4@EPHB6	ENST00000619012.4	protein_coding	142855061,142861052,142862017,142862756,142863131,142863631,142863966,142865475,142865960,142866481,142866906,142867608,142867997,142868241,142868492,142868974,142869817,142870214,142870530,142870796	142855385,142861186,142862133,142862833,142863327,142863695,142864749,142865630,142866316,142866605,142867068,142867722,142868049,142868360,142868739,142869147,142869966,142870407,142870685,142871094	Gene ID= ENSG00000106123.11 TPM= 25.98 Transcript Type= protein_coding
chr7	142862756	142871092	142862756	142871092	+	ENST00000422643.5@EPHB6	ENST00000422643.5	protein_coding	142862756,142863127,142863631,142863966,142865475,142865960,142866481,142866906,142867608,142867997,142868241,142868492,142868974,142869817,142870214,142870530,142870796	142862833,142863327,142863695,142864749,142865630,142866316,142866605,142867068,142867722,142868049,142868360,142868739,142869147,142869966,142870407,142870685,142871092	Gene ID= ENSG00000106123.11 TPM= 8.47 Transcript Type= protein_coding
chr7	143263443	143269129	143263443	143269129	+	ENST00000358406.9@GSTK1	ENST00000358406.9	protein_coding	143263443,143264086,143264548,143264992,143265261,143267617,143268091,143268788	143263585,143264167,143264676,143265092,143265296,143267733,143268184,143269129	Gene ID= ENSG00000197448.13 TPM= 117.93 Transcript Type= protein_coding
chr7	143263456	143269115	143263456	143269115	+	ENST00000479303.1@GSTK1	ENST00000479303.1	protein_coding	143263456,143264086,143264548,143264992,143267617,143268091,143268788	143263585,143264167,143264676,143265296,143267733,143268184,143269115	Gene ID= ENSG00000197448.13 TPM= 29.19 Transcript Type= protein_coding
chr7	143284951	143287296	143284951	143287296	+	ENST00000409244.5@TMEM139	ENST00000409244.5	protein_coding	143284951,143285348,143285941,143286424	143284974,143285445,143286202,143287296	Gene ID= ENSG00000178826.10 TPM= 2.34 Transcript Type= protein_coding
chr7	143284950	143288048	143284950	143288048	+	ENST00000359333.7@TMEM139	ENST00000359333.7	protein_coding	143284950,143285941,143286424	143285445,143286202,143288048	Gene ID= ENSG00000178826.10 TPM= 2.34 Transcript Type= protein_coding
chr7	143288215	143307696	143288215	143307696	+	ENST00000310447.9@CASP2	ENST00000310447.9	protein_coding	143288215,143291540,143292300,143292617,143294230,143294597,143299923,143300204,143303784,143304674,143304940	143288529,143291690,143292467,143292698,143294324,143294773,143300051,143300294,143303933,143304783,143307696	Gene ID= ENSG00000106144.19 TPM= 24.52 Transcript Type= protein_coding
chr7	143379685	143381172	143379685	143381172	-	transcript6226.chr7.nnic@NA	transcript6226.chr7.nnic	NA	143379685	143381172	Gene ID= novel_gene_chr7_6227 TPM= 15.18 Transcript Type= NA
chr7	143381907	143391109	143381907	143391109	+	ENST00000392910.6@ZYX	ENST00000392910.6	protein_coding	143381907,143382248,143382593,143382801,143388219,143388489,143388767,143389857,143390578	143382091,143382447,143382685,143383322,143388339,143388658,143388945,143389977,143391109	Gene ID= ENSG00000159840.15 TPM= 51.82 Transcript Type= protein_coding
chr7	143381080	143391111	143381080	143391111	+	ENST00000322764.9@ZYX	ENST00000322764.9	protein_coding	143381080,143381557,143382248,143382593,143382801,143388219,143388489,143388767,143389857,143390578	143381409,143381779,143382447,143382685,143383322,143388339,143388658,143388945,143389977,143391111	Gene ID= ENSG00000159840.15 TPM= 482.66 Transcript Type= protein_coding
chr7	143381575	143391109	143381575	143391109	+	ENST00000354434.8@ZYX	ENST00000354434.8	protein_coding	143381575,143382248,143382801,143388219,143388489,143388767,143389857,143390578	143381779,143382447,143383322,143388339,143388658,143388945,143389977,143391109	Gene ID= ENSG00000159840.15 TPM= 19.62 Transcript Type= protein_coding
chr7	143391112	143408892	143391112	143408892	-	ENST00000275815.3@EPHA1	ENST00000275815.3	protein_coding	143408724,143407611,143401324,143399651,143399258,143398601,143398321,143397920,143397561,143397304,143396385,143395319,143395121,143394808,143394194,143393671,143391620,143391112	143408892,143407678,143401605,143400053,143399413,143398945,143398448,143398070,143397657,143397362,143396510,143395504,143395182,143395014,143394343,143393864,143391775,143391535	Gene ID= ENSG00000146904.8 TPM= 11.09 Transcript Type= protein_coding
chr7	143391112	143396717	143391112	143396717	-	transcript6220.chr7.nic@EPHA1	transcript6220.chr7.nic	protein_coding	143396385,143395319,143395121,143394808,143394194,143393671,143391620,143391112	143396717,143395504,143395182,143395014,143394343,143393864,143391775,143391535	Gene ID= ENSG00000146904.8 TPM= 4.09 Transcript Type= NA
chr7	143621449	143725081	143621449	143725081	+	ENST00000357344.8@TCAF2	ENST00000357344.8	protein_coding	143621449,143702981,143719683,143721281,143722658,143723211,143724360	143621503,143703617,143720674,143721378,143722871,143723450,143725081	Gene ID= ENSG00000170379.19 TPM= 1.17 Transcript Type= protein_coding
chr7	143811969	143836708	143811969	143836708	-	ENST00000494978.5@AC099548.2	ENST00000494978.5	transcribed_unprocessed_pseudogene	143836640,143833247,143811969	143836708,143833883,143813779	Gene ID= ENSG00000253882.6 TPM= 6.42 Transcript Type= processed_transcript
chr7	143811968	143836933	143811968	143836933	-	ENST00000481651.1@AC099548.2	ENST00000481651.1	transcribed_unprocessed_pseudogene	143836640,143811968	143836933,143813779	Gene ID= ENSG00000253882.6 TPM= 15.76 Transcript Type= processed_transcript
chr7	143851377	143902181	143851377	143902181	-	transcript6233.chr7.nic@TCAF1	transcript6233.chr7.nic	protein_coding	143901961,143875989,143862802,143862416,143861095,143860208,143858824,143857074,143851377	143902181,143876622,143863796,143862513,143861308,143860447,143859161,143857350,143854142	Gene ID= ENSG00000198420.9 TPM= 4.2 Transcript Type= NA
chr7	143852872	143902185	143852872	143902185	-	transcript6236.chr7.nic@TCAF1	transcript6236.chr7.nic	protein_coding	143902027,143875989,143862802,143862416,143861095,143860208,143858824,143857100,143852872	143902185,143876622,143863796,143862513,143861308,143860447,143859161,143857350,143854142	Gene ID= ENSG00000198420.9 TPM= 6.74 Transcript Type= NA
chr7	143851375	143902155	143851375	143902155	-	ENST00000479870.5@TCAF1	ENST00000479870.5	protein_coding	143901961,143875989,143862802,143862416,143861095,143860208,143858824,143857100,143851375	143902155,143876622,143863796,143862513,143861308,143860447,143859161,143857350,143854142	Gene ID= ENSG00000198420.9 TPM= 47.02 Transcript Type= protein_coding
chr7	144186083	144195655	144186083	144195655	-	ENST00000378115.2@ARHGEF35	ENST00000378115.2	protein_coding	144195538,144186083	144195655,144188395	Gene ID= ENSG00000213214.4 TPM= 10.51 Transcript Type= protein_coding
chr7	144195456	144255140	144195456	144255140	+	transcript6267.chr7.nnic@AC004889.1	transcript6267.chr7.nnic	antisense_RNA	144195456,144207693,144239275,144250440	144195701,144207804,144239388,144255140	Gene ID= ENSG00000244198.5 TPM= 5.45 Transcript Type= NA
chr7	144195456	144255202	144195456	144255202	+	transcript6271.chr7.nic@AC004889.1	transcript6271.chr7.nic	antisense_RNA	144195456,144207693,144250440	144195701,144207804,144255202	Gene ID= ENSG00000244198.5 TPM= 8.37 Transcript Type= NA
chr7	144255872	144257481	144255872	144257481	+	transcript6280.chr7.nnic@NA	transcript6280.chr7.nnic	NA	144255872	144257481	Gene ID= novel_gene_chr7_6281 TPM= 10.51 Transcript Type= NA
chr7	144273426	144294256	144273426	144294256	-	transcript6256.chr7.nnic@ARHGEF34P	transcript6256.chr7.nnic	unprocessed_pseudogene	144294118,144283813,144283224,144282726,144282281,144278313,144277607,144277208,144276879,144276352,144274746,144273426	144294256,144286978,144283281,144282790,144282534,144278475,144277759,144277337,144276953,144276441,144274903,144274121	Gene ID= ENSG00000204959.4 TPM= 4.67 Transcript Type= NA
chr7	144335048	144355573	144335048	144355573	-	transcript6275.chr7.nic@OR2A1-AS1	transcript6275.chr7.nic	antisense_RNA	144355338,144343187,144335048	144355573,144343298,144336977	Gene ID= ENSG00000244479.7 TPM= 3.5 Transcript Type= NA
chr7	144355340	144380632	144355340	144380632	+	ENST00000056217.9@ARHGEF5	ENST00000056217.9	protein_coding	144355340,144362658,144366355,144366846,144367102,144371161,144371877,144372299,144372683,144373195,144374732,144375514,144377120,144378762,144379899	144355501,144365823,144366412,144366910,144367355,144371321,144372029,144372428,144372757,144373284,144374889,144375675,144377190,144378866,144380632	Gene ID= ENSG00000050327.14 TPM= 15.18 Transcript Type= protein_coding
chr7	144451941	144836053	144451941	144836053	-	ENST00000360057.7@TPK1	ENST00000360057.7	protein_coding	144835967,144835560,144765880,144682909,144648807,144623166,144591423,144548491,144451941	144836053,144835618,144765951,144682978,144648879,144623261,144591569,144548602,144453663	Gene ID= ENSG00000196511.14 TPM= 5.84 Transcript Type= protein_coding
chr7	144451950	144836053	144451950	144836053	-	ENST00000378099.7@TPK1	ENST00000378099.7	protein_coding	144835967,144835560,144765880,144682909,144648807,144623166,144548491,144451950	144836053,144835618,144765951,144682978,144648879,144623261,144548602,144453663	Gene ID= ENSG00000196511.14 TPM= 1.17 Transcript Type= protein_coding
chr7	148697264	148698840	148697264	148698840	-	transcript6307.chr7.nnic@NA	transcript6307.chr7.nnic	NA	148697264	148698840	Gene ID= novel_gene_chr7_6308 TPM= 5.84 Transcript Type= NA
chr7	148698751	148731570	148698751	148731570	+	transcript6304.chr7.nic@CUL1	transcript6304.chr7.nic	protein_coding	148698751,148729962	148699029,148731570	Gene ID= ENSG00000055130.15 TPM= 8.17 Transcript Type= NA
chr7	148698645	148801025	148698645	148801025	+	ENST00000602748.5@CUL1	ENST00000602748.5	protein_coding	148698645,148729962,148753976,148756983,148759304,148759548,148760333,148766561,148767619,148783783,148783971,148786551,148786989,148788557,148789750,148790310,148792726,148797812,148797937,148798572,148799275,148800502	148698763,148730262,148754150,148757150,148759354,148759638,148760496,148766723,148767749,148783890,148784077,148786599,148787120,148788674,148789826,148790441,148792818,148797859,148798019,148798677,148799388,148801025	Gene ID= ENSG00000055130.15 TPM= 1.75 Transcript Type= protein_coding
chr7	148698912	148801036	148698912	148801036	+	ENST00000325222.8@CUL1	ENST00000325222.8	protein_coding	148698912,148729962,148753976,148756983,148759304,148759548,148760333,148766561,148767619,148783783,148783971,148786551,148786989,148788557,148789750,148790310,148792726,148797812,148797937,148798572,148799275,148800502	148699029,148730262,148754150,148757150,148759354,148759638,148760496,148766723,148767749,148783890,148784077,148786599,148787120,148788674,148789826,148790441,148792818,148797859,148798019,148798677,148799388,148801036	Gene ID= ENSG00000055130.15 TPM= 85.82 Transcript Type= protein_coding
chr7	148799487	148801035	148799487	148801035	+	transcript6305.chr7.nnic@NA	transcript6305.chr7.nnic	NA	148799487	148801035	Gene ID= novel_gene_chr7_6306 TPM= 2.34 Transcript Type= NA
chr7	149003442	149028524	149003442	149028524	-	transcript6317.chr7.nic@PDIA4	transcript6317.chr7.nic	protein_coding	149028321,149027849,149020967,149018992,149014904,149012155,149011846,149008159,149005897,149005141,149003442	149028524,149027992,149021147,149019197,149015042,149012360,149012004,149008310,149006053,149005374,149004209	Gene ID= ENSG00000155660.10 TPM= 27.44 Transcript Type= NA
chr7	149003062	149028641	149003062	149028641	-	ENST00000286091.8@PDIA4	ENST00000286091.8	protein_coding	149028321,149020967,149018992,149014904,149012155,149011846,149008159,149005897,149005141,149003062	149028641,149021147,149019197,149015042,149012360,149012004,149008310,149006053,149005374,149004209	Gene ID= ENSG00000155660.10 TPM= 117.93 Transcript Type= protein_coding
chr7	149069643	149090782	149069643	149090782	-	ENST00000316286.13@ZNF786	ENST00000316286.13	protein_coding	149090623,149074386,149069643	149090782,149074538,149072473	Gene ID= ENSG00000197362.14 TPM= 2.92 Transcript Type= protein_coding
chr7	149069963	149090705	149069963	149090705	-	ENST00000491431.1@ZNF786	ENST00000491431.1	protein_coding	149090623,149080591,149074386,149069963	149090705,149080717,149074538,149072473	Gene ID= ENSG00000197362.14 TPM= 8.76 Transcript Type= protein_coding
chr7	149102784	149126346	149102784	149126346	-	ENST00000378061.6@ZNF425	ENST00000378061.6	protein_coding	149126196,149118222,149112137,149102784	149126346,149118348,149112295,149105566	Gene ID= ENSG00000204947.8 TPM= 3.5 Transcript Type= protein_coding
chr7	149195485	149226248	149195485	149226248	+	ENST00000610704.4@ZNF282	ENST00000610704.4	protein_coding	149195485,149198333,149206696,149207351,149210585,149212358,149213701,149223812	149195754,149198752,149206822,149207470,149210704,149212471,149213814,149226248	Gene ID= ENSG00000170265.11 TPM= 8.17 Transcript Type= protein_coding
chr7	149239651	149255609	149239651	149255609	+	ENST00000335870.6@ZNF212	ENST00000335870.6	protein_coding	149239651,149250159,149250681,149252706,149253559	149239802,149250548,149250807,149252795,149255609	Gene ID= ENSG00000170260.8 TPM= 5.84 Transcript Type= protein_coding
chr7	149262048	149284991	149262048	149284991	+	transcript6351.chr7.nnic@ZNF783	transcript6351.chr7.nnic	protein_coding	149262048,149266335,149266819,149267097,149278136,149278399,149281505	149262357,149266730,149266945,149267222,149278248,149278527,149284991	Gene ID= ENSG00000204946.9 TPM= 7.01 Transcript Type= NA
chr7	149262171	149284991	149262171	149284991	+	ENST00000434415.5@ZNF783	ENST00000434415.5	protein_coding	149262171,149266335,149266819,149267097,149278399,149281505	149262357,149266730,149266945,149267222,149278527,149284991	Gene ID= ENSG00000204946.9 TPM= 28.02 Transcript Type= protein_coding
chr7	149431363	149460664	149431363	149460664	-	transcript6361.chr7.nnic@ZNF777	transcript6361.chr7.nnic	protein_coding	149460030,149455177,149454111,149450999,149436575,149431363	149460664,149456037,149454237,149451112,149436826,149432932	Gene ID= ENSG00000196453.7 TPM= 10.89 Transcript Type= NA
chr7	149431363	149461123	149431363	149461123	-	ENST00000247930.4@ZNF777	ENST00000247930.4	protein_coding	149460815,149455177,149454111,149450999,149436575,149431363	149461123,149456037,149454237,149451112,149436826,149432932	Gene ID= ENSG00000196453.7 TPM= 6.81 Transcript Type= protein_coding
chr7	149472794	149497758	149472794	149497758	-	transcript6366.chr7.nnic@ZNF746	transcript6366.chr7.nnic	protein_coding	149497513,149494204,149493989,149492859,149477564,149476922,149472794	149497758,149494503,149494115,149492972,149477755,149477047,149475480	Gene ID= ENSG00000181220.15 TPM= 13.63 Transcript Type= NA
chr7	149472794	149497817	149472794	149497817	-	ENST00000340622.7@ZNF746	ENST00000340622.7	protein_coding	149497513,149494204,149493989,149492859,149477564,149476922,149472794	149497817,149494503,149494070,149492972,149477755,149477047,149475480	Gene ID= ENSG00000181220.15 TPM= 15.96 Transcript Type= protein_coding
chr7	149715011	149734571	149715011	149734571	+	ENST00000496259.5@KRBA1	ENST00000496259.5	protein_coding	149715011,149719546,149720008,149720835,149721383,149722422,149722783,149723734,149724652,149725315,149725887,149728523,149729188,149730147,149730428,149731672,149733206	149715066,149719672,149720127,149720990,149721535,149722553,149722956,149723889,149724849,149725488,149726060,149728675,149729370,149730341,149730568,149731776,149734571	Gene ID= ENSG00000133619.17 TPM= 9.34 Transcript Type= protein_coding
chr7	149764186	149773583	149764186	149773583	-	transcript6390.chr7.nnic@ZNF467	transcript6390.chr7.nnic	protein_coding	149773023,149770999,149770440,149769090,149764186	149773583,149771074,149770556,149769200,149766239	Gene ID= ENSG00000181444.12 TPM= 30.94 Transcript Type= NA
chr7	149764363	149776493	149764363	149776493	-	transcript6395.chr7.nnic@ZNF467	transcript6395.chr7.nnic	protein_coding	149776236,149770999,149770440,149769090,149764363	149776493,149771074,149770556,149769200,149766239	Gene ID= ENSG00000181444.12 TPM= 4.09 Transcript Type= NA
chr7	149872968	149880698	149872968	149880698	+	ENST00000615196.4@ATP6V0E2	ENST00000615196.4	protein_coding	149872968,149875598,149878678,149879335	149874169,149875645,149878790,149880698	Gene ID= ENSG00000171130.17 TPM= 59.55 Transcript Type= protein_coding
chr7	149873976	149880689	149873976	149880689	+	ENST00000479613.5@ATP6V0E2	ENST00000479613.5	protein_coding	149873976,149875598,149878678,149879335	149874169,149875645,149878746,149880689	Gene ID= ENSG00000171130.17 TPM= 11.68 Transcript Type= protein_coding
chr7	150323287	150338150	150323287	150338150	+	ENST00000359623.8@LRRC61	ENST00000359623.8	protein_coding	150323287,150325841,150336718	150323560,150326010,150338150	Gene ID= ENSG00000127399.14 TPM= 16.35 Transcript Type= protein_coding
chr7	150329789	150332721	150329789	150332721	+	ENST00000343855.5@ZBED6CL	ENST00000343855.5	protein_coding	150329789	150332721	Gene ID= ENSG00000188707.5 TPM= 2.34 Transcript Type= protein_coding
chr7	150338358	150341643	150338358	150341643	-	ENST00000466675.5@RARRES2	ENST00000466675.5	protein_coding	150340436,150340100,150338986,150338615,150338358	150341643,150340204,150339081,150338741,150338439	Gene ID= ENSG00000106538.9 TPM= 32.69 Transcript Type= protein_coding
chr7	150338319	150341674	150338319	150341674	-	ENST00000223271.7@RARRES2	ENST00000223271.7	protein_coding	150341578,150340436,150340100,150338986,150338615,150338319	150341674,150340629,150340204,150339081,150338741,150338439	Gene ID= ENSG00000106538.9 TPM= 219.89 Transcript Type= protein_coding
chr7	150368795	150374039	150368795	150374039	+	transcript6437.chr7.nic@REPIN1	transcript6437.chr7.nic	protein_coding	150368795,150369671,150371228	150369033,150369868,150374039	Gene ID= ENSG00000214022.11 TPM= 40.48 Transcript Type= NA
chr7	150368098	150374039	150368098	150374039	+	transcript6441.chr7.nic@REPIN1	transcript6441.chr7.nic	protein_coding	150368098,150371228	150369868,150374039	Gene ID= ENSG00000214022.11 TPM= 7.01 Transcript Type= NA
chr7	150368790	150374044	150368790	150374044	+	ENST00000444957.3@REPIN1	ENST00000444957.3	protein_coding	150368790,150371228	150368941,150374044	Gene ID= ENSG00000214022.11 TPM= 156.07 Transcript Type= protein_coding
chr7	150371164	150374039	150371164	150374039	+	ENST00000425389.2@REPIN1	ENST00000425389.2	protein_coding	150371164	150374039	Gene ID= ENSG00000214022.11 TPM= 38.15 Transcript Type= protein_coding
chr7	150379335	150398631	150379335	150398631	+	ENST00000329630.9@ZNF775	ENST00000329630.9	protein_coding	150379335,150388422,150396513	150379392,150388501,150398631	Gene ID= ENSG00000196456.11 TPM= 25.69 Transcript Type= protein_coding
chr7	150405313	150410954	150405313	150410954	+	transcript6451.chr7.nnic@AC073111.5	transcript6451.chr7.nnic	protein_coding	150405313,150407584,150410160	150405441,150408488,150410954	Gene ID= ENSG00000284691.1 TPM= 5.84 Transcript Type= NA
chr7	150405684	150410954	150405684	150410954	+	transcript6452.chr7.nic@AC073111.5	transcript6452.chr7.nic	protein_coding	150405684,150407584,150410160	150405904,150408488,150410954	Gene ID= ENSG00000284691.1 TPM= 4.67 Transcript Type= NA
chr7	150450630	150479392	150450630	150479392	+	ENST00000307271.3@GIMAP8	ENST00000307271.3	protein_coding	150450630,150466671,150470829,150474012,150477092	150451175,150467334,150470874,150474638,150479392	Gene ID= ENSG00000171115.3 TPM= 112.09 Transcript Type= protein_coding
chr7	150450986	150479392	150450986	150479392	+	transcript6461.chr7.nnic@GIMAP8	transcript6461.chr7.nnic	protein_coding	150450986,150466671,150470829,150477859	150451175,150467334,150470857,150479392	Gene ID= ENSG00000171115.3 TPM= 4.67 Transcript Type= NA
chr7	150450630	150479338	150450630	150479338	+	transcript6462.chr7.nnic@GIMAP8	transcript6462.chr7.nnic	protein_coding	150450630,150466671,150470829,150477092	150451175,150467334,150470874,150479338	Gene ID= ENSG00000171115.3 TPM= 4.67 Transcript Type= NA
chr7	150514830	150521073	150514830	150521073	+	ENST00000313543.4@GIMAP7	ENST00000313543.4	protein_coding	150514830,150519934	150514945,150521073	Gene ID= ENSG00000179144.4 TPM= 33.86 Transcript Type= protein_coding
chr7	150567277	150573955	150567277	150573955	+	ENST00000255945.3@GIMAP4	ENST00000255945.3	protein_coding	150567277,150569888,150572129	150567437,150569959,150573955	Gene ID= ENSG00000133574.9 TPM= 99.25 Transcript Type= protein_coding
chr7	150625375	150632385	150625375	150632385	-	ENST00000328902.9@GIMAP6	ENST00000328902.9	protein_coding	150632169,150630058,150625375	150632385,150630142,150628512	Gene ID= ENSG00000133561.15 TPM= 99.25 Transcript Type= protein_coding
chr7	150685700	150692076	150685700	150692076	+	transcript6484.chr7.nnic@GIMAP2	transcript6484.chr7.nnic	protein_coding	150685700,150687052,150690159	150685785,150687087,150692076	Gene ID= ENSG00000106560.10 TPM= 2.34 Transcript Type= NA
chr7	150685700	150693641	150685700	150693641	+	ENST00000223293.9@GIMAP2	ENST00000223293.9	protein_coding	150685700,150687052,150692315	150685785,150687087,150693641	Gene ID= ENSG00000106560.10 TPM= 10.51 Transcript Type= protein_coding
chr7	150716557	150724284	150716557	150724284	+	ENST00000307194.5@GIMAP1	ENST00000307194.5	protein_coding	150716557,150719042,150720048	150716690,150719090,150724284	Gene ID= ENSG00000213203.2 TPM= 30.36 Transcript Type= protein_coding
chr7	150737348	150744063	150737348	150744063	+	ENST00000358647.4@GIMAP5	ENST00000358647.4	protein_coding	150737348,150740879,150742183	150737708,150740927,150744063	Gene ID= ENSG00000196329.11 TPM= 12.84 Transcript Type= protein_coding
chr7	150791287	150800858	150791287	150800858	-	transcript6505.chr7.nnic@TMEM176B	transcript6505.chr7.nnic	protein_coding	150799611,150796366,150793961,150793544,150793088,150792056,150791287	150800858,150796574,150794071,150793600,150793315,150792175,150791623	Gene ID= ENSG00000106565.17 TPM= 7.01 Transcript Type= NA
chr7	150791287	150801360	150791287	150801360	-	ENST00000447204.6@TMEM176B	ENST00000447204.6	protein_coding	150800993,150796366,150793961,150793544,150793088,150792056,150791287	150801360,150796574,150794071,150793600,150793315,150792175,150791623	Gene ID= ENSG00000106565.17 TPM= 12.84 Transcript Type= protein_coding
chr7	150791292	150800533	150791292	150800533	-	ENST00000434545.5@TMEM176B	ENST00000434545.5	protein_coding	150800291,150796366,150793961,150793544,150793088,150792056,150791292	150800533,150796577,150794071,150793600,150793315,150792175,150791623	Gene ID= ENSG00000106565.17 TPM= 11.68 Transcript Type= protein_coding
chr7	150800403	150805109	150800403	150805109	+	ENST00000484928.5@TMEM176A	ENST00000484928.5	protein_coding	150800403,150801536,150802215,150803400,150803620,150804362,150804827	150800968,150801724,150802325,150803456,150803832,150804472,150805109	Gene ID= ENSG00000002933.7 TPM= 42.03 Transcript Type= protein_coding
chr7	150852477	150861504	150852477	150861504	+	ENST00000360937.8@AOC1	ENST00000360937.8	protein_coding	150852477,150856455,150858763,150860501,150860943	150852558,150858040,150859048,150860633,150861504	Gene ID= ENSG00000002726.20 TPM= 1.17 Transcript Type= protein_coding
chr7	150944961	150955906	150944961	150955906	-	ENST00000330883.8@KCNH2	ENST00000330883.8	protein_coding	150955396,150952425,150951448,150950921,150950168,150948856,150948444,150947606,150947328,150946877,150944961	150955906,150952853,150951835,150951120,150950420,150949049,150948543,150947878,150947514,150947054,150945514	Gene ID= ENSG00000055118.14 TPM= 4.67 Transcript Type= protein_coding
chr7	150949423	150955810	150949423	150955810	-	ENST00000461280.1@KCNH2	ENST00000461280.1	protein_coding	150955396,150952425,150951448,150950921,150949423	150955810,150952853,150951835,150951120,150950420	Gene ID= ENSG00000055118.14 TPM= 1.17 Transcript Type= retained_intron
chr7	150993742	151014944	150993742	151014944	+	transcript6514.chr7.nic@NOS3	transcript6514.chr7.nic	protein_coding	150993742,150995203,150996404,150996763,150998357,150998539,150998946,150999190,151000498,151001231,151001544,151001821,151002200,151006427,151006889,151007102,151008930,151009189,151009398,151010115,151010597,151010899,151012351,151013231,151013724,151014008	150993961,150995314,150996552,150996925,150998448,150998680,150999085,150999364,151000599,151001425,151001617,151001965,151002304,151006494,151007005,151007276,151009062,151009267,151009585,151010287,151010807,151010986,151012472,151013379,151013918,151014944	Gene ID= ENSG00000164867.10 TPM= 43.59 Transcript Type= NA
chr7	151028423	151047782	151028423	151047782	+	ENST00000358849.8@ABCB8	ENST00000358849.8	protein_coding	151028423,151033605,151034273,151034505,151034724,151035581,151035882,151036073,151036544,151040268,151040498,151040828,151041099,151041961,151043971,151045209	151028610,151033917,151034428,151034599,151034829,151035742,151035967,151036170,151036649,151040301,151040634,151040922,151041232,151042108,151044221,151047782	Gene ID= ENSG00000197150.12 TPM= 25.1 Transcript Type= protein_coding
chr7	151028422	151047782	151028422	151047782	+	ENST00000542328.5@ABCB8	ENST00000542328.5	protein_coding	151028422,151034273,151034505,151034724,151035581,151035882,151036073,151036544,151040268,151040498,151040828,151041099,151041961,151043971,151045209	151028610,151034428,151034599,151034829,151035742,151035967,151036170,151036649,151040301,151040634,151040922,151041232,151042108,151044221,151047782	Gene ID= ENSG00000197150.12 TPM= 5.25 Transcript Type= protein_coding
chr7	151037688	151045562	151037688	151045562	+	ENST00000482899.1@ABCB8	ENST00000482899.1	protein_coding	151037688,151040498,151040828,151041099,151041961,151043971,151045209	151040301,151040644,151040922,151041232,151042108,151044221,151045562	Gene ID= ENSG00000197150.12 TPM= 1.17 Transcript Type= retained_intron
chr7	151028462	151045563	151028462	151045563	+	ENST00000498578.5@ABCB8	ENST00000498578.5	protein_coding	151028462,151033605,151034273,151034505,151034724,151035581,151035882,151036073,151036544,151040268,151040498,151040828,151041099,151041961,151043971,151045209	151028610,151033917,151034428,151034599,151034829,151035742,151035967,151036170,151036649,151040301,151040634,151040922,151041232,151042108,151044146,151045563	Gene ID= ENSG00000197150.12 TPM= 2.34 Transcript Type= protein_coding
chr7	151028467	151037570	151028467	151037570	+	ENST00000477092.5@ABCB8	ENST00000477092.5	protein_coding	151028467,151033605,151034273,151034505,151034724,151035581,151035882,151036073,151036544,151037241	151028610,151033917,151034428,151034599,151034829,151035742,151035967,151036170,151036649,151037570	Gene ID= ENSG00000197150.12 TPM= 3.5 Transcript Type= protein_coding
chr7	151053812	151058530	151053812	151058530	-	ENST00000485972.5@CDK5	ENST00000485972.5	protein_coding	151057812,151057072,151056908,151056736,151056580,151055753,151055532,151055277,151055027,151054405,151054212,151053812	151058530,151057160,151056975,151056796,151056636,151055848,151055606,151055373,151055096,151054465,151054292,151054095	Gene ID= ENSG00000164885.12 TPM= 11.68 Transcript Type= protein_coding
chr7	151059570	151076527	151059570	151076527	+	ENST00000413384.6@SLC4A2	ENST00000413384.6	protein_coding	151059570,151061925,151064202,151064526,151064848,151066517,151066851,151067874,151069947,151070181,151070457,151070727,151071072,151071390,151071689,151071942,151074039,151074399,151074675,151075255,151075606,151076013,151076287	151059762,151062038,151064367,151064767,151064966,151066761,151066993,151068054,151070082,151070346,151070571,151070911,151071297,151071605,151071837,151072136,151074293,151074488,151074841,151075508,151075775,151076186,151076527	Gene ID= ENSG00000164889.13 TPM= 324.65 Transcript Type= protein_coding
chr7	151059576	151076523	151059576	151076523	+	transcript6550.chr7.nnic@SLC4A2	transcript6550.chr7.nnic	protein_coding	151059576,151061925,151064202,151064526,151064848,151066517,151066851,151067874,151069947,151070181,151070457,151070727,151071072,151071689,151071942,151074039,151074399,151074675,151075255,151075606,151076013,151076287	151059762,151062038,151064367,151064767,151064966,151066761,151066993,151068054,151070082,151070346,151070571,151070911,151071297,151071837,151072136,151074293,151074488,151074841,151075508,151075775,151076186,151076523	Gene ID= ENSG00000164889.13 TPM= 20.58 Transcript Type= NA
chr7	151062547	151076522	151062547	151076522	+	ENST00000392826.6@SLC4A2	ENST00000392826.6	protein_coding	151062547,151064202,151064526,151064848,151066517,151066851,151067874,151069947,151070181,151070457,151070727,151071072,151071390,151071689,151071942,151074039,151074399,151074675,151075255,151075606,151076013,151076287	151062663,151064367,151064767,151064966,151066761,151066993,151068054,151070082,151070346,151070571,151070911,151071297,151071605,151071837,151072136,151074293,151074488,151074841,151075508,151075775,151076186,151076522	Gene ID= ENSG00000164889.13 TPM= 24.05 Transcript Type= protein_coding
chr7	151076626	151080812	151076626	151080812	-	transcript6562.chr7.nnic@FASTK	transcript6562.chr7.nnic	protein_coding	151080209,151079500,151078842,151078562,151077879,151077621,151077310,151077101,151076913,151076626	151080812,151079922,151079021,151078701,151078092,151077780,151077401,151077236,151077027,151076832	Gene ID= ENSG00000164896.19 TPM= 4.18 Transcript Type= NA
chr7	151076626	151080821	151076626	151080821	-	transcript6563.chr7.nic@FASTK	transcript6563.chr7.nic	protein_coding	151080437,151079500,151078842,151078562,151077879,151077621,151077310,151077101,151076913,151076626	151080821,151079922,151079021,151078701,151078092,151077780,151077401,151077236,151077027,151076832	Gene ID= ENSG00000164896.19 TPM= 10.79 Transcript Type= NA
chr7	151076626	151080842	151076626	151080842	-	transcript6569.chr7.nic@FASTK	transcript6569.chr7.nic	protein_coding	151079500,151078842,151078562,151077879,151077621,151077310,151077101,151076913,151076626	151080842,151079021,151078701,151078092,151077780,151077401,151077236,151077027,151076832	Gene ID= ENSG00000164896.19 TPM= 8.85 Transcript Type= NA
chr7	151076626	151080881	151076626	151080881	-	transcript6576.chr7.nic@FASTK	transcript6576.chr7.nic	protein_coding	151080685,151079500,151078842,151078562,151077879,151077621,151077310,151076913,151076626	151080881,151079922,151079021,151078701,151078092,151077780,151077401,151077236,151076832	Gene ID= ENSG00000164896.19 TPM= 6.32 Transcript Type= NA
chr7	151076626	151080829	151076626	151080829	-	transcript6577.chr7.nic@FASTK	transcript6577.chr7.nic	protein_coding	151078842,151078562,151077879,151077621,151077310,151077101,151076913,151076626	151080829,151078701,151078092,151077780,151077401,151077236,151077027,151076832	Gene ID= ENSG00000164896.19 TPM= 4.18 Transcript Type= NA
chr7	151076626	151080842	151076626	151080842	-	transcript6582.chr7.nic@FASTK	transcript6582.chr7.nic	protein_coding	151079500,151078842,151078562,151077879,151077621,151077101,151076913,151076626	151080842,151079021,151078701,151078092,151077780,151077401,151077027,151076832	Gene ID= ENSG00000164896.19 TPM= 3.6 Transcript Type= NA
chr7	151076626	151080842	151076626	151080842	-	transcript6605.chr7.nic@FASTK	transcript6605.chr7.nic	protein_coding	151079500,151078842,151078562,151076913,151076626	151080842,151079021,151078701,151078092,151076832	Gene ID= ENSG00000164896.19 TPM= 4.18 Transcript Type= NA
chr7	151076626	151080844	151076626	151080844	-	ENST00000297532.10@FASTK	ENST00000297532.10	protein_coding	151080685,151079500,151078842,151078562,151077879,151077621,151077310,151077101,151076913,151076626	151080844,151079922,151079021,151078701,151078092,151077780,151077401,151077236,151077027,151076832	Gene ID= ENSG00000164896.19 TPM= 50.49 Transcript Type= protein_coding
chr7	151076626	151080842	151076626	151080842	-	ENST00000353841.6@FASTK	ENST00000353841.6	protein_coding	151080685,151078842,151078562,151077879,151077621,151077310,151077101,151076913,151076626	151080842,151079021,151078701,151078092,151077780,151077401,151077236,151077027,151076832	Gene ID= ENSG00000164896.19 TPM= 14.29 Transcript Type= protein_coding
chr7	151076646	151080790	151076646	151080790	-	ENST00000482806.5@FASTK	ENST00000482806.5	protein_coding	151080685,151079500,151078842,151078562,151077879,151077621,151077101,151076913,151076646	151080790,151079922,151079021,151078701,151078092,151077780,151077401,151077027,151076832	Gene ID= ENSG00000164896.19 TPM= 9.34 Transcript Type= retained_intron
chr7	151076625	151080812	151076625	151080812	-	transcript6617.chr7.nnic@NA	transcript6617.chr7.nnic	NA	151076625	151080812	Gene ID= novel_gene_chr7_6618 TPM= 5.84 Transcript Type= NA
chr7	151081085	151083489	151081085	151083489	-	transcript6611.chr7.nnic@TMUB1	transcript6611.chr7.nnic	protein_coding	151083434,151082175,151081085	151083489,151082458,151081900	Gene ID= ENSG00000164897.12 TPM= 11.48 Transcript Type= NA
chr7	151081080	151083546	151081080	151083546	-	ENST00000297533.8@TMUB1	ENST00000297533.8	protein_coding	151083434,151082175,151081080	151083546,151082593,151081900	Gene ID= ENSG00000164897.12 TPM= 66.35 Transcript Type= protein_coding
chr7	151081086	151082908	151081086	151082908	-	ENST00000462940.1@TMUB1	ENST00000462940.1	protein_coding	151082175,151081086	151082908,151081900	Gene ID= ENSG00000164897.12 TPM= 14.4 Transcript Type= protein_coding
chr7	151113634	151144434	151113634	151144434	+	transcript6636.chr7.nic@AGAP3	transcript6636.chr7.nic	protein_coding	151113634,151116793,151117095,151117371,151117636,151118210,151118505,151119987,151120520,151123794,151128580,151134400,151138143,151139979,151141898,151142163,151142412,151143341,151143737	151115641,151116851,151117182,151117456,151117777,151118344,151118632,151120145,151120745,151123886,151128684,151134568,151138313,151140116,151142052,151142253,151142634,151143596,151144434	Gene ID= ENSG00000133612.18 TPM= 13.04 Transcript Type= NA
chr7	151086488	151144434	151086488	151144434	+	transcript6642.chr7.nic@AGAP3	transcript6642.chr7.nic	protein_coding	151086488,151116793,151117095,151117371,151117636,151118210,151118505,151119987,151122725,151128580,151134400,151138143,151139979,151141898,151142163,151142412,151143341,151143737	151087072,151116851,151117182,151117456,151117777,151118344,151118632,151120145,151123886,151128684,151134568,151138313,151140116,151142052,151142253,151142634,151143596,151144434	Gene ID= ENSG00000133612.18 TPM= 21.22 Transcript Type= NA
chr7	151113632	151144434	151113632	151144434	+	transcript6647.chr7.nnic@AGAP3	transcript6647.chr7.nnic	protein_coding	151113632,151116793,151117095,151117371,151117636,151118210,151118505,151119987,151123794,151128580,151134400,151138143,151139979,151141898,151142163,151142412,151143341,151143737	151114609,151116851,151117182,151117456,151117777,151118344,151118632,151120145,151123886,151128684,151134568,151138313,151140116,151142052,151142253,151142634,151143596,151144434	Gene ID= ENSG00000133612.18 TPM= 22.62 Transcript Type= NA
chr7	151113634	151144434	151113634	151144434	+	transcript6648.chr7.nic@AGAP3	transcript6648.chr7.nic	protein_coding	151113634,151116793,151117095,151117371,151117636,151118210,151118505,151119987,151123794,151128580,151134400,151138143,151139979,151141898,151142163,151142412,151143341,151143737	151115641,151116851,151117182,151117456,151117777,151118344,151118632,151120145,151123886,151128684,151134568,151138313,151140116,151142052,151142253,151142634,151143596,151144434	Gene ID= ENSG00000133612.18 TPM= 51.81 Transcript Type= NA
chr7	151086360	151144434	151086360	151144434	+	transcript6661.chr7.nic@AGAP3	transcript6661.chr7.nic	protein_coding	151086360,151116793,151117095,151117371,151117636,151118210,151118505,151119987,151123794,151128580,151134400,151141898,151142163,151142412,151143341,151143737	151087072,151116851,151117182,151117456,151117777,151118344,151118632,151120145,151123886,151128684,151134568,151142052,151142253,151142634,151143596,151144434	Gene ID= ENSG00000133612.18 TPM= 44.82 Transcript Type= NA
chr7	151114007	151144434	151114007	151144434	+	transcript6664.chr7.nic@AGAP3	transcript6664.chr7.nic	protein_coding	151114007,151116793,151117095,151117371,151117636,151118210,151118505,151119987,151123794,151128580,151134400,151141898,151142163,151142412,151143341,151143737	151115641,151116851,151117182,151117456,151117777,151118344,151118632,151120145,151123886,151128684,151134568,151142052,151142253,151142634,151143596,151144434	Gene ID= ENSG00000133612.18 TPM= 21.47 Transcript Type= NA
chr7	151113634	151131312	151113634	151131312	+	transcript6670.chr7.nnic@AGAP3	transcript6670.chr7.nnic	protein_coding	151113634,151116793,151117095,151117371,151117636,151118210,151118505,151119987,151123794,151128580,151130204	151115641,151116851,151117182,151117456,151117777,151118344,151118632,151120145,151123886,151128684,151131312	Gene ID= ENSG00000133612.18 TPM= 9.34 Transcript Type= NA
chr7	151114678	151123638	151114678	151123638	+	ENST00000335367.7@AGAP3	ENST00000335367.7	protein_coding	151114678,151116793,151117095,151117371,151117636,151118210,151118505,151119987,151122725	151115641,151116851,151117182,151117456,151117777,151118344,151118632,151120145,151123638	Gene ID= ENSG00000133612.18 TPM= 9.34 Transcript Type= protein_coding
chr7	151212490	151227230	151212490	151227230	-	ENST00000287844.6@ABCF2	ENST00000287844.6	protein_coding	151227163,151226305,151224776,151223932,151223678,151222521,151221578,151219064,151218754,151218561,151218081,151215967,151215604,151214879,151212490	151227230,151226500,151224988,151224114,151223849,151222616,151221680,151219159,151218873,151218650,151218191,151216029,151215732,151215082,151214191	Gene ID= ENSG00000033050.7 TPM= 16.35 Transcript Type= protein_coding
chr7	151232480	151238817	151232480	151238817	+	transcript6725.chr7.nnic@CHPF2	transcript6725.chr7.nnic	protein_coding	151232480,151235048,151237374	151234274,151235612,151238817	Gene ID= ENSG00000033100.16 TPM= 11.84 Transcript Type= NA
chr7	151232480	151238822	151232480	151238822	+	transcript6730.chr7.nic@CHPF2	transcript6730.chr7.nic	protein_coding	151232480,151235048	151234274,151238822	Gene ID= ENSG00000033100.16 TPM= 12.26 Transcript Type= NA
chr7	151232508	151238820	151232508	151238820	+	transcript6731.chr7.nnic@CHPF2	transcript6731.chr7.nnic	protein_coding	151232508,151237374	151234274,151238820	Gene ID= ENSG00000033100.16 TPM= 3.67 Transcript Type= NA
chr7	151232499	151238827	151232499	151238827	+	ENST00000035307.6@CHPF2	ENST00000035307.6	protein_coding	151232499,151235048,151236408,151237374	151234274,151235612,151236590,151238827	Gene ID= ENSG00000033100.16 TPM= 106.81 Transcript Type= protein_coding
chr7	151238973	151277452	151238973	151277452	-	ENST00000392811.6@SMARCD3	ENST00000392811.6	protein_coding	151277077,151275114,151245460,151243659,151242721,151242481,151242137,151241877,151241492,151240425,151240112,151239624,151239396,151238973	151277452,151275251,151245671,151243701,151242843,151242603,151242232,151241978,151241653,151240522,151240247,151239746,151239497,151239156	Gene ID= ENSG00000082014.16 TPM= 63.79 Transcript Type= protein_coding
chr7	151238974	151277169	151238974	151277169	-	transcript6704.chr7.nnic@SMARCD3	transcript6704.chr7.nnic	protein_coding	151277077,151275114,151245460,151243659,151242721,151242481,151242137,151241877,151241492,151241164,151240112,151239624,151239396,151238974	151277169,151275251,151245671,151243701,151242843,151242603,151242232,151241978,151241653,151241394,151240522,151239746,151239497,151239156	Gene ID= ENSG00000082014.16 TPM= 3.64 Transcript Type= NA
chr7	151238974	151275524	151238974	151275524	-	transcript6707.chr7.nic@SMARCD3	transcript6707.chr7.nic	protein_coding	151275114,151245460,151243659,151242721,151242481,151242137,151241877,151241492,151240425,151240112,151239624,151239396,151238974	151275524,151245671,151243701,151242843,151242603,151242232,151241978,151241653,151240522,151240247,151239746,151239497,151239156	Gene ID= ENSG00000082014.16 TPM= 6.56 Transcript Type= NA
chr7	151238974	151277169	151238974	151277169	-	transcript6714.chr7.nic@SMARCD3	transcript6714.chr7.nic	protein_coding	151277077,151275114,151245460,151243659,151242721,151242481,151242137,151240112,151239624,151239396,151238974	151277169,151275251,151245671,151243701,151242843,151242603,151242232,151241978,151239746,151239497,151239156	Gene ID= ENSG00000082014.16 TPM= 3.64 Transcript Type= NA
chr7	151238973	151248973	151238973	151248973	-	ENST00000262188.12@SMARCD3	ENST00000262188.12	protein_coding	151248485,151245460,151243659,151242721,151242481,151242137,151241877,151241492,151240425,151240112,151239624,151239396,151238973	151248973,151245671,151243701,151242843,151242603,151242232,151241978,151241653,151240522,151240247,151239746,151239497,151239156	Gene ID= ENSG00000082014.16 TPM= 35.75 Transcript Type= protein_coding
chr7	151239008	151241492	151239008	151241492	-	ENST00000470588.1@SMARCD3	ENST00000470588.1	protein_coding	151240112,151239624,151239396,151239008	151241492,151239746,151239497,151239156	Gene ID= ENSG00000082014.16 TPM= 1.17 Transcript Type= retained_intron
chr7	151341808	151378449	151341808	151378449	+	transcript6739.chr7.nic@NUB1	transcript6739.chr7.nic	protein_coding	151341808,151345348,151349073,151351424,151352812,151355768,151356128,151360141,151366939,151367861,151368735,151375848,151376634,151377047	151341846,151345466,151349240,151351482,151352882,151355950,151356222,151360247,151367125,151367968,151368887,151375943,151376811,151378449	Gene ID= ENSG00000013374.15 TPM= 7.39 Transcript Type= NA
chr7	151341827	151374624	151341827	151374624	+	transcript6740.chr7.nic@NUB1	transcript6740.chr7.nic	protein_coding	151341827,151345348,151349073,151351424,151352812,151355768,151356128,151360141,151366939,151367861,151368735,151374097	151341846,151345466,151349240,151351482,151352882,151355950,151356222,151360247,151367125,151367968,151368887,151374624	Gene ID= ENSG00000013374.15 TPM= 2.72 Transcript Type= NA
chr7	151341809	151361249	151341809	151361249	+	transcript6743.chr7.nic@NUB1	transcript6743.chr7.nic	protein_coding	151341809,151345348,151349073,151351424,151352812,151355768,151356128,151360141,151361059	151341965,151345466,151349240,151351482,151352882,151355950,151356222,151360914,151361249	Gene ID= ENSG00000013374.15 TPM= 3.5 Transcript Type= NA
chr7	151341699	151378449	151341699	151378449	+	ENST00000413040.6@NUB1	ENST00000413040.6	protein_coding	151341699,151345348,151349073,151351424,151352812,151355768,151356128,151360141,151366939,151367861,151368735,151374097,151375848,151376634,151377047	151341846,151345466,151349240,151351482,151352882,151355950,151356222,151360247,151367125,151367968,151368887,151374201,151375943,151376811,151378449	Gene ID= ENSG00000013374.15 TPM= 31.91 Transcript Type= protein_coding
chr7	151341804	151361249	151341804	151361249	+	ENST00000468404.5@NUB1	ENST00000468404.5	protein_coding	151341804,151345348,151349073,151351424,151352812,151355768,151356128,151360141,151361059	151341846,151345466,151349240,151351482,151352882,151355950,151356222,151360914,151361249	Gene ID= ENSG00000013374.15 TPM= 10.51 Transcript Type= nonsense_mediated_decay
chr7	151381121	151410020	151381121	151410020	-	ENST00000334493.10@WDR86	ENST00000334493.10	protein_coding	151409427,151400100,151395776,151385088,151381878,151381121	151410020,151400241,151396196,151385223,151381981,151381746	Gene ID= ENSG00000187260.15 TPM= 2.34 Transcript Type= protein_coding
chr7	151466012	151519924	151466012	151519924	-	ENST00000262187.9@RHEB	ENST00000262187.9	protein_coding	151519460,151490943,151484737,151477333,151471549,151471394,151470571,151466012	151519924,151491014,151484804,151477415,151471605,151471441,151470652,151467211	Gene ID= ENSG00000106615.9 TPM= 20.43 Transcript Type= protein_coding
chr7	151556111	151877125	151556111	151877125	-	ENST00000287878.8@PRKAG2	ENST00000287878.8	protein_coding	151876507,151786470,151781152,151675420,151632069,151595345,151576371,151574891,151572664,151570171,151568716,151565720,151565346,151564078,151560524,151556111	151877125,151786541,151781431,151675637,151632138,151595454,151576452,151574949,151572709,151570225,151568842,151565885,151565383,151564224,151560617,151557232	Gene ID= ENSG00000106617.13 TPM= 5.84 Transcript Type= protein_coding
chr7	151837268	151876788	151837268	151876788	-	ENST00000474383.1@PRKAG2	ENST00000474383.1	protein_coding	151876507,151837268	151876788,151837495	Gene ID= ENSG00000106617.13 TPM= 1.17 Transcript Type= processed_transcript
chr7	151556124	151632353	151556124	151632353	-	ENST00000418337.6@PRKAG2	ENST00000418337.6	protein_coding	151632069,151595345,151576371,151574891,151572664,151570171,151568716,151565720,151565346,151564078,151560524,151556124	151632353,151595454,151576452,151574949,151572709,151570225,151568842,151565885,151565383,151564224,151560617,151557232	Gene ID= ENSG00000106617.13 TPM= 12.84 Transcript Type= protein_coding
chr7	152025633	152122347	152025633	152122347	+	transcript6771.chr7.nic@GALNT11	transcript6771.chr7.nic	protein_coding	152025633,152027597,152094190,152100798,152103112,152105245,152108038,152110528,152113246,152117157,152118678,152120831,152121546	152025884,152027718,152094522,152100921,152103278,152105370,152108287,152110645,152113398,152117375,152118782,152120968,152122347	Gene ID= ENSG00000178234.12 TPM= 3.5 Transcript Type= NA
chr7	152025691	152106133	152025691	152106133	+	transcript6781.chr7.nic@GALNT11	transcript6781.chr7.nic	protein_coding	152025691,152094190,152100798,152103112,152105245	152025884,152094522,152100921,152103278,152106133	Gene ID= ENSG00000178234.12 TPM= 2.34 Transcript Type= NA
chr7	152025693	152122347	152025693	152122347	+	ENST00000430044.6@GALNT11	ENST00000430044.6	protein_coding	152025693,152094190,152100798,152103112,152105245,152108038,152110528,152113246,152117157,152118678,152120831,152121546	152025884,152094522,152100921,152103278,152105370,152108287,152110645,152113398,152117375,152118782,152120968,152122347	Gene ID= ENSG00000178234.12 TPM= 52.54 Transcript Type= protein_coding
chr7	152251056	152251908	152251056	152251908	+	transcript6787.chr7.nnic@NA	transcript6787.chr7.nnic	NA	152251056	152251908	Gene ID= novel_gene_chr7_6788 TPM= 2.34 Transcript Type= NA
chr7	152284498	152288043	152284498	152288043	+	transcript6789.chr7.nnic@NA	transcript6789.chr7.nnic	NA	152284498	152288043	Gene ID= novel_gene_chr7_6790 TPM= 3.5 Transcript Type= NA
chr7	152463786	152465549	152463786	152465549	+	ENST00000564834.1@LINC01003	ENST00000564834.1	lincRNA	152463786	152465549	Gene ID= ENSG00000261455.1 TPM= 17.51 Transcript Type= lincRNA
chr7	152759749	152855378	152759749	152855378	+	ENST00000256001.12@ACTR3B	ENST00000256001.12	protein_coding	152759749,152783187,152800531,152801621,152814550,152816481,152820299,152823342,152825030,152852126,152853494,152854458	152759926,152783242,152800655,152801731,152814645,152816588,152820442,152823515,152825122,152852251,152853577,152855378	Gene ID= ENSG00000133627.17 TPM= 1.17 Transcript Type= protein_coding
chr7	152759773	152855371	152759773	152855371	+	transcript6800.chr7.nic@ACTR3B	transcript6800.chr7.nic	protein_coding	152759773,152800531,152801621,152811697,152814550,152816481,152820299,152823342,152825030,152852126,152853494,152854458	152759926,152800655,152801731,152811733,152814645,152816588,152820442,152823515,152825122,152852251,152853577,152855371	Gene ID= ENSG00000133627.17 TPM= 2.34 Transcript Type= NA
chr7	152759788	152854949	152759788	152854949	+	ENST00000397282.2@ACTR3B	ENST00000397282.2	protein_coding	152759788,152800531,152801621,152814550,152816481,152820299,152823342,152825030,152852126,152853494,152854458	152759926,152800655,152801731,152814645,152816588,152820442,152823515,152825122,152852251,152853577,152854949	Gene ID= ENSG00000133627.17 TPM= 1.17 Transcript Type= protein_coding
chr7	155003448	155005703	155003448	155005703	+	ENST00000608317.1@PAXIP1-AS1	ENST00000608317.1	lincRNA	155003448	155005703	Gene ID= ENSG00000273344.1 TPM= 10.51 Transcript Type= lincRNA
chr7	155295918	155297541	155295918	155297541	-	ENST00000609974.1@AC144652.1	ENST00000609974.1	lincRNA	155295918	155297541	Gene ID= ENSG00000273117.1 TPM= 2.34 Transcript Type= lincRNA
chr7	155297824	155310233	155297824	155310233	+	transcript6824.chr7.nic@INSIG1	transcript6824.chr7.nic	protein_coding	155297824,155298259,155301566,155302251,155302747,155303825,155308241	155297959,155298697,155301690,155302417,155302846,155303895,155310233	Gene ID= ENSG00000186480.12 TPM= 37.36 Transcript Type= NA
chr7	155297776	155310235	155297776	155310235	+	ENST00000340368.8@INSIG1	ENST00000340368.8	protein_coding	155297776,155298259,155301566,155302251,155302747,155308241	155297959,155298697,155301690,155302417,155302846,155310235	Gene ID= ENSG00000186480.12 TPM= 186.82 Transcript Type= protein_coding
chr7	155297878	155310235	155297878	155310235	+	transcript6829.chr7.nic@INSIG1	transcript6829.chr7.nic	protein_coding	155297878,155298259,155301566,155302251,155302747,155308241	155298027,155298697,155301690,155302417,155302846,155310235	Gene ID= ENSG00000186480.12 TPM= 23.35 Transcript Type= NA
chr7	155644451	155701183	155644451	155701183	+	ENST00000287912.7@RBM33	ENST00000287912.7	protein_coding	155644451,155665175,155672867,155678608,155680590,155700773	155644919,155665253,155672915,155678684,155680908,155701183	Gene ID= ENSG00000184863.10 TPM= 5.84 Transcript Type= protein_coding
chr7	155801828	155803989	155801828	155803989	-	transcript6845.chr7.nnic@NA	transcript6845.chr7.nnic	NA	155801828	155803989	Gene ID= novel_gene_chr7_6846 TPM= 3.5 Transcript Type= NA
chr7	156638363	156640654	156638363	156640654	-	ENST00000333319.6@LINC01006	ENST00000333319.6	lincRNA	156638363	156640654	Gene ID= ENSG00000182648.11 TPM= 11.68 Transcript Type= lincRNA
chr7	156677843	156893213	156677843	156893213	-	transcript6861.chr7.nic@LMBR1	transcript6861.chr7.nic	protein_coding	156892928,156836813,156833753,156826605,156796389,156763669,156763108,156762134,156756393,156734177,156728644,156727930,156725764,156725435,156724112,156688030,156681829,156680443,156679077,156677843	156893213,156836885,156833792,156826744,156796492,156763795,156763176,156762198,156756465,156734257,156728720,156728007,156725837,156725525,156724178,156688191,156684163,156680574,156679306,156678350	Gene ID= ENSG00000105983.20 TPM= 7.01 Transcript Type= NA
chr7	156677791	156893230	156677791	156893230	-	ENST00000353442.9@LMBR1	ENST00000353442.9	protein_coding	156892928,156836813,156833753,156826605,156796389,156763669,156763108,156762134,156756393,156734177,156728644,156727930,156725764,156725435,156724112,156688030,156677791	156893230,156836885,156833792,156826744,156796492,156763795,156763176,156762198,156756465,156734257,156728720,156728007,156725837,156725525,156724178,156688191,156684163	Gene ID= ENSG00000105983.20 TPM= 1.17 Transcript Type= protein_coding
chr7	156673324	156676087	156673324	156676087	-	transcript6893.chr7.nnic@NA	transcript6893.chr7.nnic	NA	156673324	156676087	Gene ID= novel_gene_chr7_6894 TPM= 2.34 Transcript Type= NA
chr7	156881242	156885368	156881242	156885368	+	transcript6891.chr7.nnic@NA	transcript6891.chr7.nnic	NA	156881242	156885368	Gene ID= novel_gene_chr7_6892 TPM= 2.34 Transcript Type= NA
chr7	156949712	156963352	156949712	156963352	+	transcript6899.chr7.nic@NOM1	transcript6899.chr7.nic	protein_coding	156949712,156952474,156954103,156959851,156962151,156963008	156950724,156952598,156954298,156960174,156962261,156963352	Gene ID= ENSG00000146909.7 TPM= 4.67 Transcript Type= NA
chr7	156949723	156973182	156949723	156973182	+	ENST00000275820.3@NOM1	ENST00000275820.3	protein_coding	156949723,156952474,156954103,156959851,156962151,156963008,156963905,156966270,156966961,156969087,156969529	156950724,156952598,156954298,156960174,156962261,156963175,156964026,156966402,156967092,156969196,156973182	Gene ID= ENSG00000146909.7 TPM= 3.5 Transcript Type= protein_coding
chr7	157138924	157269372	157138924	157269372	+	transcript6908.chr7.nnic@UBE3C	transcript6908.chr7.nnic	protein_coding	157138924,157139219,157163810,157169048,157170304,157174919,157178690,157181518,157182108,157183878,157186834,157201721,157207398,157207703,157216867,157220689,157223254,157225407,157231080,157248368,157253954,157254244,157256914,157267585	157139161,157139338,157163863,157169122,157170450,157175034,157178847,157181671,157182328,157184029,157187021,157201807,157207555,157207935,157216971,157220776,157223351,157225539,157231327,157248580,157254142,157254310,157257044,157269372	Gene ID= ENSG00000009335.17 TPM= 7.01 Transcript Type= NA
chr7	157138913	157269372	157138913	157269372	+	ENST00000348165.9@UBE3C	ENST00000348165.9	protein_coding	157138913,157163810,157169048,157170304,157174919,157178690,157181518,157182108,157183878,157186834,157201721,157207398,157207703,157216867,157220689,157223254,157225407,157231080,157248368,157253954,157254244,157256914,157267585	157139338,157163863,157169122,157170450,157175034,157178847,157181671,157182328,157184029,157187021,157201807,157207555,157207935,157216971,157220776,157223351,157225539,157231327,157248580,157254142,157254310,157257044,157269372	Gene ID= ENSG00000009335.17 TPM= 37.36 Transcript Type= protein_coding
chr7	157138922	157269372	157138922	157269372	+	transcript6919.chr7.nnic@UBE3C	transcript6919.chr7.nnic	protein_coding	157138922,157163810,157170304,157174919,157178690,157181518,157182108,157183878,157186834,157201721,157207398,157207703,157216867,157220689,157223254,157225407,157231080,157248368,157253954,157254244,157256914,157267585	157139338,157163863,157170450,157175034,157178847,157181671,157182328,157184029,157187021,157201807,157207555,157207935,157216971,157220776,157223351,157225539,157231327,157248580,157254142,157254310,157257044,157269372	Gene ID= ENSG00000009335.17 TPM= 5.25 Transcript Type= NA
chr7	157138922	157217245	157138922	157217245	+	transcript6925.chr7.nic@UBE3C	transcript6925.chr7.nic	protein_coding	157138922,157163810,157169048,157170304,157174919,157178690,157181518,157182108,157183878,157186834,157201721,157207398,157207703,157216867	157139338,157163863,157169122,157170450,157175034,157178847,157181671,157182328,157184029,157187021,157201807,157207555,157207935,157217245	Gene ID= ENSG00000009335.17 TPM= 2.34 Transcript Type= NA
chr7	157336966	157417439	157336966	157417439	+	ENST00000262177.8@DNAJB6	ENST00000262177.8	protein_coding	157336966,157358547,157363161,157366502,157367373,157382246,157384867,157385541,157409795,157416016	157337144,157358637,157363270,157366561,157367483,157382377,157385008,157385611,157410001,157417439	Gene ID= ENSG00000105993.14 TPM= 196.16 Transcript Type= protein_coding
chr7	157336966	157386324	157336966	157386324	+	ENST00000429029.6@DNAJB6	ENST00000429029.6	protein_coding	157336966,157358547,157363161,157366502,157367373,157382246,157384867,157385541	157337144,157358637,157363270,157366561,157367483,157382377,157385008,157386324	Gene ID= ENSG00000105993.14 TPM= 105.08 Transcript Type= protein_coding
chr7	157539056	157682938	157539056	157682938	-	transcript6939.chr7.nic@PTPRN2	transcript6939.chr7.nic	protein_coding	157682725,157656357,157621362,157604002,157595238,157578021,157576613,157571440,157568902,157548946,157539056	157682938,157656551,157621509,157604075,157595315,157578140,157576779,157571493,157568966,157549019,157540785	Gene ID= ENSG00000155093.17 TPM= 5.84 Transcript Type= NA
chr7	157539056	157569029	157539056	157569029	-	transcript6941.chr7.nic@PTPRN2	transcript6941.chr7.nic	protein_coding	157568902,157548946,157539056	157569029,157549019,157540785	Gene ID= ENSG00000155093.17 TPM= 17.51 Transcript Type= NA
chr7	158125613	158126273	158125613	158126273	-	transcript6946.chr7.nnic@NA	transcript6946.chr7.nnic	NA	158125613	158126273	Gene ID= novel_gene_chr7_6947 TPM= 2.34 Transcript Type= NA
chr7	158631313	158704829	158631313	158704829	-	ENST00000356309.7@NCAPG2	ENST00000356309.7	protein_coding	158704724,158701822,158693309,158692842,158690568,158689819,158687348,158686172,158683300,158680721,158679960,158675477,158671514,158664528,158664184,158662194,158658338,158656552,158656260,158655339,158655118,158654595,158652293,158650832,158646460,158645519,158644289,158631313	158704829,158701938,158693497,158692956,158690722,158689953,158687442,158686241,158683386,158680816,158680085,158675656,158671666,158664750,158664296,158662367,158658408,158656705,158656433,158655455,158655258,158654694,158652480,158650972,158646563,158645619,158644388,158631717	Gene ID= ENSG00000146918.19 TPM= 7.01 Transcript Type= protein_coding
chr7	158730995	158829628	158730995	158829628	-	ENST00000251527.9@ESYT2	ENST00000251527.9	protein_coding	158829089,158799031,158797942,158793650,158788345,158788004,158773341,158767654,158764677,158763083,158761496,158760058,158759486,158749649,158748194,158743529,158741523,158739023,158737048,158735503,158734422,158730995	158829628,158799072,158798076,158793726,158788417,158788093,158773396,158767774,158764853,158763165,158761544,158760147,158759581,158749723,158748280,158743678,158741896,158739121,158737179,158735608,158734471,158734252	Gene ID= ENSG00000117868.15 TPM= 66.55 Transcript Type= protein_coding
chr7	158733611	158829472	158733611	158829472	-	ENST00000275418.11@ESYT2	ENST00000275418.11	protein_coding	158829089,158799031,158797942,158793650,158788345,158788004,158773341,158767654,158764677,158763083,158761496,158760058,158759486,158752781,158749649,158748194,158743529,158741523,158739023,158737048,158735503,158734422,158733611	158829472,158799072,158798076,158793726,158788417,158788093,158773396,158767774,158764853,158763165,158761544,158760147,158759581,158752843,158749723,158748280,158743678,158741896,158739121,158737179,158735608,158734471,158734252	Gene ID= ENSG00000117868.15 TPM= 2.34 Transcript Type= protein_coding
chr7	158856606	158946189	158856606	158946189	+	transcript6970.chr7.nnic@WDR60	transcript6970.chr7.nnic	protein_coding	158856606,158869855,158871142,158876609,158879684,158884564,158887021,158891265,158900146,158901739,158902376,158905989,158911550,158912985,158914233,158918740,158922377,158923571,158926187,158926402,158926992,158930455,158934129,158934418,158941925,158945581	158856750,158869908,158871562,158876691,158879989,158884619,158887075,158891333,158900264,158901816,158902595,158906091,158911679,158913096,158914321,158918869,158922549,158923733,158926300,158926463,158927043,158930515,158934228,158934549,158942148,158946189	Gene ID= ENSG00000126870.15 TPM= 2.63 Transcript Type= NA
chr7	158856593	158946189	158856593	158946189	+	transcript6977.chr7.nnic@WDR60	transcript6977.chr7.nnic	protein_coding	158856593,158869855,158871142,158876609,158879684,158884564,158887021,158891265,158901739,158902376,158905989,158911550,158912985,158914233,158918740,158922377,158923571,158926187,158926402,158926992,158930455,158934129,158941925,158945581	158856750,158869908,158871562,158876691,158879989,158884619,158887075,158891333,158901816,158902595,158906091,158911679,158913096,158914321,158918869,158922549,158923733,158926300,158926463,158927043,158930515,158934228,158942148,158946189	Gene ID= ENSG00000126870.15 TPM= 2.63 Transcript Type= NA
chr7	158856539	158946189	158856539	158946189	+	transcript6979.chr7.nnic@WDR60	transcript6979.chr7.nnic	protein_coding	158856539,158869855,158871142,158876609,158879684,158887021,158891265,158901739,158902376,158905989,158911550,158912985,158914233,158918740,158922377,158923571,158926187,158926402,158926992,158930455,158941925,158945581	158856750,158869908,158871562,158876691,158879989,158887075,158891333,158901816,158902595,158906091,158911679,158913096,158914321,158918869,158922549,158923733,158926300,158926463,158927043,158930515,158942148,158946189	Gene ID= ENSG00000126870.15 TPM= 2.63 Transcript Type= NA
chr7	158856578	158946189	158856578	158946189	+	ENST00000407559.7@WDR60	ENST00000407559.7	protein_coding	158856578,158869855,158871142,158876609,158879684,158884564,158887021,158891265,158901739,158902376,158905989,158911550,158912985,158914233,158918740,158922377,158923571,158926187,158926402,158926992,158930455,158934129,158934418,158941925,158945581	158856750,158869908,158871562,158876691,158879989,158884619,158887075,158891333,158901816,158902595,158906091,158911679,158913096,158914321,158918869,158922549,158923733,158926300,158926463,158927043,158930515,158934228,158934549,158942148,158946189	Gene ID= ENSG00000126870.15 TPM= 16.64 Transcript Type= protein_coding
chr7	158992373	158996101	158992373	158996101	+	transcript6983.chr7.nnic@NA	transcript6983.chr7.nnic	NA	158992373	158996101	Gene ID= novel_gene_chr7_6984 TPM= 2.34 Transcript Type= NA
chr7	159028175	159144957	159028175	159144957	-	ENST00000262178.6@VIPR2	ENST00000262178.6	protein_coding	159144721,159142446,159109812,159103757,159058481,159043035,159036752,159035952,159034581,159034213,159031938,159031828,159028175	159144957,159142545,159109919,159103854,159058578,159043176,159036902,159036012,159034650,159034304,159032067,159031869,159030789	Gene ID= ENSG00000106018.13 TPM= 3.5 Transcript Type= protein_coding
chr8	208348	232258	208348	232258	-	transcript8.chr8.nnic@RPL23AP53	transcript8.chr8.nnic	transcribed_processed_pseudogene	232129,230804,223785,219290,208348	232258,230907,223906,219417,213710	Gene ID= ENSG00000223508.5 TPM= 3.5 Transcript Type= NA
chr8	208348	232258	208348	232258	-	transcript14.chr8.nnic@RPL23AP53	transcript14.chr8.nnic	transcribed_processed_pseudogene	232129,230804,219290,208348	232258,230907,219417,213710	Gene ID= ENSG00000223508.5 TPM= 2.34 Transcript Type= NA
chr8	232200	247342	232200	247342	+	ENST00000308811.8@ZNF596	ENST00000308811.8	protein_coding	232200,240824,242887,243722,244619,245154	232415,240907,243013,243805,244701,247342	Gene ID= ENSG00000172748.13 TPM= 1.17 Transcript Type= protein_coding
chr8	406808	469690	406808	469690	+	ENST00000350302.7@FBXO25	ENST00000350302.7	protein_coding	406808,413073,431341,432886,435615,449990,451269,458369,463007,468715	407066,413213,431444,432935,435707,450083,451453,458551,463150,469690	Gene ID= ENSG00000147364.16 TPM= 16.35 Transcript Type= protein_coding
chr8	406808	469871	406808	469871	+	ENST00000352684.2@FBXO25	ENST00000352684.2	protein_coding	406808,413073,431341,435615,449990,451269,458369,463007,468715	407066,413213,431444,435707,450083,451453,458551,463150,469871	Gene ID= ENSG00000147364.16 TPM= 2.34 Transcript Type= protein_coding
chr8	419316	423084	419316	423084	-	transcript38.chr8.nnic@NA	transcript38.chr8.nnic	NA	419316	423084	Gene ID= novel_gene_chr8_39 TPM= 2.34 Transcript Type= NA
chr8	450721	454868	450721	454868	-	transcript36.chr8.nnic@NA	transcript36.chr8.nnic	NA	450721	454868	Gene ID= novel_gene_chr8_37 TPM= 5.84 Transcript Type= NA
chr8	470814	544901	470814	544901	-	transcript31.chr8.nnic@TDRP	transcript31.chr8.nnic	protein_coding	544650,494494,470814	544901,494597,473742	Gene ID= ENSG00000180190.11 TPM= 2.34 Transcript Type= NA
chr8	489803	544998	489803	544998	-	ENST00000324079.10@TDRP	ENST00000324079.10	protein_coding	544650,494494,489803	544998,494597,492744	Gene ID= ENSG00000180190.11 TPM= 11.68 Transcript Type= protein_coding
chr8	664200	731239	664200	731239	-	ENST00000262109.7@ERICH1	ENST00000262109.7	protein_coding	731140,715861,692478,673289,668598,664200	731239,716007,692612,674047,668792,664676	Gene ID= ENSG00000104714.13 TPM= 19.85 Transcript Type= protein_coding
chr8	664199	672436	664199	672436	-	transcript55.chr8.nnic@NA	transcript55.chr8.nnic	NA	664199	672436	Gene ID= novel_gene_chr8_56 TPM= 2.34 Transcript Type= NA
chr8	1728291	1731174	1728291	1731174	+	transcript57.chr8.nnic@NA	transcript57.chr8.nnic	NA	1728291	1731174	Gene ID= novel_gene_chr8_58 TPM= 2.34 Transcript Type= NA
chr8	1763704	1786570	1763704	1786570	+	ENST00000331222.5@CLN8	ENST00000331222.5	protein_coding	1763704,1770932,1780250	1763885,1771597,1786570	Gene ID= ENSG00000182372.9 TPM= 19.85 Transcript Type= protein_coding
chr8	1763800	1781354	1763800	1781354	+	ENST00000637156.1@CLN8	ENST00000637156.1	protein_coding	1763800,1770932,1780250	1763925,1771597,1781354	Gene ID= ENSG00000182372.9 TPM= 1.17 Transcript Type= protein_coding
chr8	1762625	1763297	1762625	1763297	-	ENST00000518481.1@AC100810.1	ENST00000518481.1	antisense_RNA	1763023,1762625	1763297,1762928	Gene ID= ENSG00000253982.1 TPM= 15.18 Transcript Type= antisense_RNA
chr8	1823988	1958641	1823988	1958641	+	ENST00000520359.5@ARHGEF10	ENST00000520359.5	protein_coding	1823988,1843353,1857960,1859897,1864370,1866526,1869194,1876571,1882635,1885601,1893569,1894393,1896333,1898433,1903281,1905571,1909295,1922964,1923468,1923774,1925283,1926377,1928427,1929286,1933800,1945481,1952705,1956749	1824113,1843436,1858115,1860184,1864436,1866602,1869250,1876734,1882749,1885707,1893646,1894572,1896449,1898525,1903451,1905716,1909470,1923079,1923595,1923874,1925404,1926463,1928650,1929443,1933942,1945655,1952827,1958641	Gene ID= ENSG00000104728.15 TPM= 21.6 Transcript Type= protein_coding
chr8	1823976	1958633	1823976	1958633	+	ENST00000349830.7@ARHGEF10	ENST00000349830.7	protein_coding	1823976,1843353,1857960,1859897,1864373,1866526,1869194,1876571,1880048,1882635,1885601,1893569,1894393,1896333,1898433,1903281,1905571,1909295,1922964,1923468,1923774,1925283,1926377,1928427,1929286,1933800,1945481,1952705,1956749	1824113,1843436,1858115,1860184,1864436,1866602,1869250,1876734,1880164,1882749,1885707,1893646,1894572,1896449,1898525,1903451,1905716,1909470,1923079,1923595,1923874,1925404,1926463,1928650,1929443,1933942,1945655,1952827,1958633	Gene ID= ENSG00000104728.15 TPM= 7.59 Transcript Type= protein_coding
chr8	1973878	2006936	1973878	2006936	+	ENST00000320248.3@KBTBD11	ENST00000320248.3	protein_coding	1973878,2000285	1973935,2006936	Gene ID= ENSG00000176595.3 TPM= 31.53 Transcript Type= protein_coding
chr8	2140743	2145438	2140743	2145438	+	ENST00000520298.5@MYOM2	ENST00000520298.5	protein_coding	2140743,2143401,2144664	2140886,2143456,2145438	Gene ID= ENSG00000036448.9 TPM= 1.17 Transcript Type= processed_transcript
chr8	2726956	2728812	2726956	2728812	+	transcript92.chr8.nnic@NA	transcript92.chr8.nnic	NA	2726956	2728812	Gene ID= novel_gene_chr8_93 TPM= 2.34 Transcript Type= NA
chr8	6403551	6406548	6403551	6406548	-	ENST00000500118.2@AC016065.1	ENST00000500118.2	antisense_RNA	6405706,6403551	6406548,6405120	Gene ID= ENSG00000246089.3 TPM= 2.34 Transcript Type= antisense_RNA
chr8	6405406	6406542	6405406	6406542	-	ENST00000606853.1@AC016065.1	ENST00000606853.1	antisense_RNA	6405406	6406542	Gene ID= ENSG00000246089.3 TPM= 5.84 Transcript Type= antisense_RNA
chr8	6406592	6648504	6406592	6648504	+	ENST00000344683.9@MCPH1	ENST00000344683.9	protein_coding	6406592,6409279,6414765,6431499,6436048,6438953,6442067,6444393,6455143,6477594,6480714,6499852,6621454,6642994	6406689,6409370,6414883,6431586,6436162,6439096,6442156,6445547,6455252,6477631,6480876,6499929,6621691,6648504	Gene ID= ENSG00000147316.12 TPM= 3.5 Transcript Type= protein_coding
chr8	6406596	6446567	6406596	6446567	+	ENST00000519480.5@MCPH1	ENST00000519480.5	protein_coding	6406596,6409279,6414765,6431499,6436048,6438953,6442067,6444393	6406689,6409370,6414883,6431586,6436162,6439096,6442156,6446567	Gene ID= ENSG00000147316.12 TPM= 4.67 Transcript Type= protein_coding
chr8	6499651	6563409	6499651	6563409	-	ENST00000325203.9@ANGPT2	ENST00000325203.9	protein_coding	6562647,6532332,6527555,6521178,6519864,6514677,6513678,6508932,6499651	6563409,6532487,6527676,6521410,6519994,6514778,6513844,6509062,6503261	Gene ID= ENSG00000091879.13 TPM= 7.01 Transcript Type= protein_coding
chr8	6502298	6563245	6502298	6563245	-	ENST00000629816.2@ANGPT2	ENST00000629816.2	protein_coding	6562647,6532332,6527555,6521178,6519864,6514677,6513678,6508932,6502298	6563245,6532487,6527676,6521410,6519991,6514778,6513844,6509062,6503261	Gene ID= ENSG00000091879.13 TPM= 1.17 Transcript Type= protein_coding
chr8	6667231	6708270	6667231	6708270	-	transcript115.chr8.nnic@MCPH1-AS1	transcript115.chr8.nnic	antisense_RNA	6708141,6674546,6667231	6708270,6675069,6670240	Gene ID= ENSG00000249898.7 TPM= 2.34 Transcript Type= NA
chr8	6708357	6759666	6708357	6759666	+	ENST00000285518.10@AGPAT5	ENST00000285518.10	protein_coding	6708357,6724870,6730711,6732561,6741661,6747670,6755051,6757163	6708887,6724939,6730826,6732650,6741751,6747828,6755174,6759666	Gene ID= ENSG00000155189.11 TPM= 31.53 Transcript Type= protein_coding
chr8	6977650	6980080	6977650	6980080	-	ENST00000382692.2@DEFA1	ENST00000382692.2	protein_coding	6980013,6978460,6977650	6980080,6978646,6977879	Gene ID= ENSG00000206047.2 TPM= 4.67 Transcript Type= protein_coding
chr8	6996766	6999195	6996766	6999195	-	ENST00000382689.7@DEFA1B	ENST00000382689.7	protein_coding	6999123,6997577,6996766	6999195,6997763,6996996	Gene ID= ENSG00000240247.7 TPM= 4.67 Transcript Type= protein_coding
chr8	8701938	8704106	8701938	8704106	+	ENST00000519106.1@CLDN23	ENST00000519106.1	protein_coding	8701938	8704106	Gene ID= ENSG00000253958.1 TPM= 71.22 Transcript Type= protein_coding
chr8	8783354	8893645	8783354	8893645	-	ENST00000276282.6@MFHAS1	ENST00000276282.6	protein_coding	8890061,8797365,8783354	8893645,8797491,8786055	Gene ID= ENSG00000147324.10 TPM= 23.35 Transcript Type= protein_coding
chr8	8790481	8796701	8790481	8796701	+	transcript141.chr8.nnic@NA	transcript141.chr8.nnic	NA	8790481	8796701	Gene ID= novel_gene_chr8_142 TPM= 9.34 Transcript Type= NA
chr8	9007937	9010813	9007937	9010813	-	transcript153.chr8.nnic@NA	transcript153.chr8.nnic	NA	9007937	9010813	Gene ID= novel_gene_chr8_154 TPM= 4.67 Transcript Type= NA
chr8	9136255	9150696	9136255	9150696	-	ENST00000310455.3@PPP1R3B	ENST00000310455.3	protein_coding	9150563,9136255	9150696,9141668	Gene ID= ENSG00000173281.4 TPM= 14.01 Transcript Type= protein_coding
chr8	9555914	9782346	9555914	9782346	+	ENST00000310430.10@TNKS	ENST00000310430.10	protein_coding	9555914,9580159,9615582,9679951,9680725,9704663,9706187,9706811,9708371,9709955,9710142,9720374,9726641,9730890,9733279,9734865,9735377,9748024,9751609,9752544,9761516,9763147,9764716,9765692,9766239,9770106,9776650	9556612,9580383,9615677,9679987,9680800,9704757,9706253,9706997,9708492,9710046,9710220,9720545,9726720,9731035,9733444,9735084,9735486,9748212,9751846,9752626,9761636,9763244,9764790,9765797,9766425,9770262,9782346	Gene ID= ENSG00000173273.15 TPM= 5.84 Transcript Type= protein_coding
chr8	10054292	10354806	10054292	10354806	+	transcript170.chr8.nic@MSRA	transcript170.chr8.nic	protein_coding	10054292,10207833,10245104,10301534,10319883,10353616	10054658,10207901,10245223,10301638,10319989,10354806	Gene ID= ENSG00000175806.14 TPM= 2.34 Transcript Type= NA
chr8	10054268	10428891	10054268	10428891	+	ENST00000317173.8@MSRA	ENST00000317173.8	protein_coding	10054268,10207833,10245104,10301534,10319883,10428148	10054658,10207901,10245223,10301638,10319989,10428891	Gene ID= ENSG00000175806.14 TPM= 10.51 Transcript Type= protein_coding
chr8	10723768	10730512	10723768	10730512	-	ENST00000304501.1@SOX7	ENST00000304501.1	protein_coding	10730196,10723768	10730512,10726666	Gene ID= ENSG00000171056.7 TPM= 26.85 Transcript Type= protein_coding
chr8	10764963	10839876	10764963	10839876	-	ENST00000314787.7@PINX1	ENST00000314787.7	protein_coding	10839738,10834666,10832892,10831665,10826152,10820193,10764963	10839876,10834775,10832984,10831743,10826244,10820269,10765916	Gene ID= ENSG00000254093.8 TPM= 1.17 Transcript Type= protein_coding
chr8	11108956	11110082	11108956	11110082	+	transcript183.chr8.nnic@NA	transcript183.chr8.nnic	NA	11108956	11110082	Gene ID= novel_gene_chr8_184 TPM= 2.34 Transcript Type= NA
chr8	11200434	11203664	11200434	11203664	+	transcript191.chr8.nnic@NA	transcript191.chr8.nnic	NA	11200434	11203664	Gene ID= novel_gene_chr8_192 TPM= 2.34 Transcript Type= NA
chr8	11284416	11328146	11284416	11328146	+	ENST00000221086.7@MTMR9	ENST00000221086.7	protein_coding	11284416,11295194,11300023,11304841,11306190,11309527,11314923,11316673,11319687,11322625	11285070,11295302,11300148,11305014,11306407,11309688,11315064,11316893,11319838,11328146	Gene ID= ENSG00000104643.9 TPM= 17.51 Transcript Type= protein_coding
chr8	11284451	11302274	11284451	11302274	+	transcript199.chr8.nic@MTMR9	transcript199.chr8.nic	protein_coding	11284451,11295194,11300023	11285070,11295302,11302274	Gene ID= ENSG00000104643.9 TPM= 2.34 Transcript Type= NA
chr8	11286611	11292010	11286611	11292010	-	transcript201.chr8.nnic@NA	transcript201.chr8.nnic	NA	11286611	11292010	Gene ID= novel_gene_chr8_202 TPM= 3.5 Transcript Type= NA
chr8	11421463	11445445	11421463	11445445	-	transcript205.chr8.nic@FAM167A	transcript205.chr8.nic	protein_coding	11445420,11444031,11421463	11445445,11444808,11424636	Gene ID= ENSG00000154319.14 TPM= 14.01 Transcript Type= NA
chr8	11421463	11466767	11421463	11466767	-	ENST00000284486.8@FAM167A	ENST00000284486.8	protein_coding	11466626,11444031,11421463	11466767,11444808,11424636	Gene ID= ENSG00000154319.14 TPM= 46.7 Transcript Type= protein_coding
chr8	11769639	11787345	11769639	11787345	+	ENST00000436750.7@NEIL2	ENST00000436750.7	protein_coding	11769639,11771446,11779598,11783203,11785963	11769791,11771585,11779950,11783399,11787345	Gene ID= ENSG00000154328.15 TPM= 18 Transcript Type= protein_coding
chr8	11769709	11787345	11769709	11787345	+	ENST00000403422.7@NEIL2	ENST00000403422.7	protein_coding	11769709,11779598,11783203,11785963	11769791,11779950,11783399,11787345	Gene ID= ENSG00000154328.15 TPM= 1.84 Transcript Type= protein_coding
chr8	11769739	11787346	11769739	11787346	+	ENST00000284503.6@NEIL2	ENST00000284503.6	protein_coding	11769739,11771446,11779598,11783203,11785963	11770335,11771585,11779950,11783399,11787346	Gene ID= ENSG00000154328.15 TPM= 20.34 Transcript Type= protein_coding
chr8	11769699	11787340	11769699	11787340	+	ENST00000455213.6@NEIL2	ENST00000455213.6	protein_coding	11769699,11770174,11771446,11779598,11783203,11785963	11769791,11770335,11771585,11779950,11783399,11787340	Gene ID= ENSG00000154328.15 TPM= 3.01 Transcript Type= protein_coding
chr8	11786629	11803331	11786629	11803331	-	transcript237.chr8.nnic@AC069185.1	transcript237.chr8.nnic	lincRNA	11801313,11787800,11786629	11803331,11788067,11787305	Gene ID= ENSG00000255046.1 TPM= 3.5 Transcript Type= NA
chr8	11795573	11839304	11795573	11839304	+	ENST00000615631.4@FDFT1	ENST00000615631.4	protein_coding	11795573,11802759,11808794,11809667,11821750,11826024,11830244,11831518,11838388	11796011,11802931,11808891,11809850,11821878,11826215,11830420,11831670,11839304	Gene ID= ENSG00000079459.12 TPM= 37.95 Transcript Type= protein_coding
chr8	11802611	11839309	11802611	11839309	+	ENST00000220584.8@FDFT1	ENST00000220584.8	protein_coding	11802611,11808794,11809667,11821750,11826024,11830244,11831518,11838388	11802931,11808891,11809850,11821878,11826215,11830420,11831670,11839309	Gene ID= ENSG00000079459.12 TPM= 12.26 Transcript Type= protein_coding
chr8	11808417	11838967	11808417	11838967	+	ENST00000525954.5@FDFT1	ENST00000525954.5	protein_coding	11808417,11809667,11821750,11826024,11830244,11831518,11838388	11808891,11809850,11821878,11826215,11830420,11831670,11838967	Gene ID= ENSG00000079459.12 TPM= 14.01 Transcript Type= protein_coding
chr8	11802766	11838905	11802766	11838905	+	ENST00000525900.5@FDFT1	ENST00000525900.5	protein_coding	11802766,11808794,11809667,11821750,11826024,11830244,11831518,11838388	11802910,11808891,11809850,11821878,11826215,11830420,11831670,11838905	Gene ID= ENSG00000079459.12 TPM= 1.17 Transcript Type= protein_coding
chr8	11803012	11838960	11803012	11838960	+	ENST00000528812.5@FDFT1	ENST00000528812.5	protein_coding	11803012,11808794,11809667,11821750,11826024,11830244,11831518,11838388	11803518,11808891,11809850,11821878,11826215,11830420,11831670,11838960	Gene ID= ENSG00000079459.12 TPM= 1.17 Transcript Type= protein_coding
chr8	11804602	11807179	11804602	11807179	-	transcript238.chr8.nnic@NA	transcript238.chr8.nnic	NA	11804602	11807179	Gene ID= novel_gene_chr8_239 TPM= 30.36 Transcript Type= NA
chr8	11844320	11868087	11844320	11868087	-	ENST00000453527.6@CTSB	ENST00000453527.6	protein_coding	11868001,11861406,11853329,11852610,11850866,11849046,11848067,11847679,11847052,11845661,11844320	11868087,11861479,11853479,11852695,11850980,11849164,11848152,11847822,11847168,11845789,11845222	Gene ID= ENSG00000164733.20 TPM= 68.9 Transcript Type= protein_coding
chr8	11842524	11868229	11842524	11868229	-	ENST00000353047.10@CTSB	ENST00000353047.10	protein_coding	11868001,11853329,11852610,11850866,11849046,11848067,11847679,11847052,11845661,11842524	11868229,11853479,11852695,11850980,11849164,11848152,11847822,11847168,11845789,11845222	Gene ID= ENSG00000164733.20 TPM= 125.47 Transcript Type= protein_coding
chr8	11844053	11868112	11844053	11868112	-	ENST00000530640.6@CTSB	ENST00000530640.6	protein_coding	11868001,11853329,11852610,11850866,11849046,11848067,11847679,11847052,11845661,11845082,11844053	11868112,11853479,11852695,11850980,11849164,11848152,11847822,11847168,11845789,11845222,11844241	Gene ID= ENSG00000164733.20 TPM= 12.75 Transcript Type= protein_coding
chr8	11844094	11868112	11844094	11868112	-	ENST00000531089.5@CTSB	ENST00000531089.5	protein_coding	11868001,11864376,11853329,11852610,11850866,11849046,11848067,11847679,11847052,11845661,11845082,11844094	11868112,11864463,11853479,11852695,11850980,11849164,11848152,11847822,11847168,11845789,11845222,11844241	Gene ID= ENSG00000164733.20 TPM= 1.4 Transcript Type= protein_coding
chr8	11844355	11868106	11844355	11868106	-	ENST00000533455.5@CTSB	ENST00000533455.5	protein_coding	11868001,11864376,11853329,11852610,11850866,11849046,11848067,11847679,11847052,11845661,11844355	11868106,11864463,11853479,11852695,11850980,11849164,11848152,11847822,11847168,11845789,11845222	Gene ID= ENSG00000164733.20 TPM= 357.56 Transcript Type= protein_coding
chr8	11844370	11868106	11844370	11868106	-	ENST00000534510.5@CTSB	ENST00000534510.5	protein_coding	11868001,11857858,11853329,11852610,11850866,11849046,11848067,11847679,11847052,11845661,11844370	11868106,11857940,11853479,11852695,11850980,11849164,11848152,11847822,11847168,11845789,11845222	Gene ID= ENSG00000164733.20 TPM= 4.72 Transcript Type= protein_coding
chr8	11844340	11868079	11844340	11868079	-	ENST00000345125.7@CTSB	ENST00000345125.7	protein_coding	11868001,11861361,11853329,11852610,11850866,11849046,11848067,11847679,11847052,11845661,11844340	11868079,11861479,11853479,11852695,11850980,11849164,11848152,11847822,11847168,11845789,11845222	Gene ID= ENSG00000164733.20 TPM= 3.34 Transcript Type= protein_coding
chr8	11859933	11864341	11859933	11864341	+	transcript351.chr8.nnic@NA	transcript351.chr8.nnic	NA	11859933	11864341	Gene ID= novel_gene_chr8_352 TPM= 140.11 Transcript Type= NA
chr8	11864386	11865866	11864386	11865866	+	transcript349.chr8.nnic@NA	transcript349.chr8.nnic	NA	11864386	11865866	Gene ID= novel_gene_chr8_350 TPM= 36.2 Transcript Type= NA
chr8	12006188	12015193	12006188	12015193	-	ENST00000641966.1@AC107918.4	ENST00000641966.1	transcribed_unprocessed_pseudogene	12014831,12006188	12015193,12008965	Gene ID= ENSG00000284610.1 TPM= 1.17 Transcript Type= processed_transcript
chr8	12437011	12566915	12437011	12566915	+	transcript388.chr8.nnic@AC130352.1	transcript388.chr8.nnic	lincRNA	12437011,12438164,12440969,12444756,12530943,12565886	12437710,12438511,12441061,12444894,12531031,12566915	Gene ID= ENSG00000270154.1 TPM= 4.67 Transcript Type= NA
chr8	12437011	12566915	12437011	12566915	+	transcript391.chr8.nnic@AC130352.1	transcript391.chr8.nnic	lincRNA	12437011,12438164,12441000,12444756,12530943,12565886	12437710,12438511,12441061,12444894,12531031,12566915	Gene ID= ENSG00000270154.1 TPM= 3.5 Transcript Type= NA
chr8	12437011	12566915	12437011	12566915	+	transcript396.chr8.nnic@AC130352.1	transcript396.chr8.nnic	lincRNA	12437011,12438164,12444756,12530943,12565886	12437710,12438511,12444894,12531031,12566915	Gene ID= ENSG00000270154.1 TPM= 2.34 Transcript Type= NA
chr8	12537079	12665583	12537079	12665583	-	transcript375.chr8.nnic@AC068587.6	transcript375.chr8.nnic	processed_transcript	12665278,12659130,12607923,12607291,12601787,12601158,12580828,12537079	12665583,12659829,12607990,12607531,12601854,12601398,12581044,12539065	Gene ID= ENSG00000283674.2 TPM= 2.34 Transcript Type= NA
chr8	12721906	12755570	12721906	12755570	-	transcript408.chr8.nic@LONRF1	transcript408.chr8.nic	protein_coding	12754700,12743164,12740874,12737995,12736900,12736701,12735286,12731736,12729174,12728901,12725727,12721906	12755570,12743282,12740996,12738144,12737140,12736764,12735400,12731857,12729332,12729063,12725879,12723254	Gene ID= ENSG00000154359.12 TPM= 42.03 Transcript Type= NA
chr8	12721894	12755490	12721894	12755490	-	ENST00000398246.7@LONRF1	ENST00000398246.7	protein_coding	12754700,12743164,12740874,12737995,12736900,12736701,12735286,12731736,12729174,12728901,12725727,12721894	12755490,12743282,12740996,12738144,12737140,12736797,12735400,12731857,12729332,12729063,12725879,12723254	Gene ID= ENSG00000154359.12 TPM= 63.05 Transcript Type= protein_coding
chr8	12751298	12755554	12751298	12755554	-	transcript418.chr8.nnic@NA	transcript418.chr8.nnic	NA	12751298	12755554	Gene ID= novel_gene_chr8_419 TPM= 10.51 Transcript Type= NA
chr8	12754580	12756621	12754580	12756621	+	transcript416.chr8.nnic@NA	transcript416.chr8.nnic	NA	12754580	12756621	Gene ID= novel_gene_chr8_417 TPM= 2.34 Transcript Type= NA
chr8	12951600	13024761	12951600	13024761	+	transcript423.chr8.nic@KIAA1456	transcript423.chr8.nic	protein_coding	12951600,12990834,13006202,13012684,13021008	12952358,12991031,13006356,13012857,13024761	Gene ID= ENSG00000250305.8 TPM= 3.5 Transcript Type= NA
chr8	12951635	13007671	12951635	13007671	+	ENST00000528753.2@KIAA1456	ENST00000528753.2	protein_coding	12951635,12990834,13006202	12952358,12991031,13007671	Gene ID= ENSG00000250305.8 TPM= 1.17 Transcript Type= protein_coding
chr8	13083361	13276789	13083361	13276789	-	transcript434.chr8.nic@DLC1	transcript434.chr8.nic	protein_coding	13276695,13115586,13110742,13102790,13099347,13098399,13095086,13094759,13092612,13091318,13090252,13088487,13086290,13083361	13276789,13115657,13110823,13102853,13100770,13098575,13095245,13094957,13092825,13091432,13090470,13088704,13086463,13085931	Gene ID= ENSG00000164741.14 TPM= 116.47 Transcript Type= NA
chr8	13085189	13133474	13085189	13133474	-	ENST00000358919.6@DLC1	ENST00000358919.6	protein_coding	13132944,13115586,13110742,13102790,13099347,13098399,13095086,13094759,13092612,13091318,13090252,13088487,13086290,13085189	13133474,13115657,13110823,13102853,13100770,13098575,13095245,13094957,13092825,13091432,13090470,13088704,13086463,13085931	Gene ID= ENSG00000164741.14 TPM= 29.68 Transcript Type= protein_coding
chr8	13085577	13276546	13085577	13276546	-	ENST00000512044.6@DLC1	ENST00000512044.6	protein_coding	13276262,13115586,13110742,13102790,13099347,13098399,13095086,13094759,13092612,13091318,13090252,13088487,13086290,13085577	13276546,13115657,13110823,13102853,13100770,13098575,13095245,13094957,13092825,13091432,13090470,13088704,13086463,13085931	Gene ID= ENSG00000164741.14 TPM= 61.21 Transcript Type= protein_coding
chr8	13114904	13120355	13114904	13120355	+	transcript455.chr8.nnic@NA	transcript455.chr8.nnic	NA	13114904	13120355	Gene ID= novel_gene_chr8_456 TPM= 4.67 Transcript Type= NA
chr8	13566843	13568287	13566843	13568287	+	ENST00000297324.4@C8orf48	ENST00000297324.4	protein_coding	13566843	13568287	Gene ID= ENSG00000164743.4 TPM= 3.5 Transcript Type= protein_coding
chr8	15540223	15766649	15540223	15766649	+	ENST00000382020.8@TUSC3	ENST00000382020.8	protein_coding	15540223,15623080,15650697,15659507,15662156,15673747,15730666,15743538,15748375,15764203	15540568,15623249,15650814,15659647,15662296,15673836,15730729,15743612,15748465,15766649	Gene ID= ENSG00000104723.20 TPM= 4.67 Transcript Type= protein_coding
chr8	15540244	15699305	15540244	15699305	+	transcript463.chr8.nnic@TUSC3	transcript463.chr8.nnic	protein_coding	15540244,15623080,15650697,15659507,15662156,15673747,15698871	15540568,15623249,15650814,15659647,15662296,15673836,15699305	Gene ID= ENSG00000104723.20 TPM= 2.34 Transcript Type= NA
chr8	15540283	15764459	15540283	15764459	+	ENST00000503731.5@TUSC3	ENST00000503731.5	protein_coding	15540283,15623080,15650697,15659507,15662156,15673747,15730666,15743538,15748375,15757791,15764203	15540568,15623249,15650814,15659647,15662296,15673836,15730729,15743612,15748465,15757855,15764459	Gene ID= ENSG00000104723.20 TPM= 3.5 Transcript Type= protein_coding
chr8	16139319	16192659	16139319	16192659	-	ENST00000381998.8@MSR1	ENST00000381998.8	protein_coding	16192598,16177886,16175187,16168458,16164065,16155064,16150231,16143558,16139319	16192659,16177992,16175300,16168870,16164251,16155144,16150311,16143611,16141045	Gene ID= ENSG00000038945.14 TPM= 42.03 Transcript Type= protein_coding
chr8	17027238	17122644	17027238	17122644	+	ENST00000318063.9@MICU3	ENST00000318063.9	protein_coding	17027238,17064084,17069688,17077783,17081693,17085236,17086964,17090546,17098458,17104391,17105413,17114093,17116443,17118707,17120288	17027660,17064237,17069719,17077861,17081740,17085318,17087035,17090584,17098553,17104491,17105584,17114201,17116600,17118775,17122644	Gene ID= ENSG00000155970.11 TPM= 5.84 Transcript Type= protein_coding
chr8	17246931	17300477	17246931	17300477	+	transcript516.chr8.nnic@VPS37A	transcript516.chr8.nnic	protein_coding	17246931,17265907,17268258,17268856,17274733,17276397,17280028,17280239,17280375,17284473,17286347,17294987,17298067,17299819	17247369,17265981,17268372,17268956,17274958,17276467,17280155,17280297,17280443,17284616,17286427,17296412,17298158,17300477	Gene ID= ENSG00000155975.9 TPM= 2.34 Transcript Type= NA
chr8	17246917	17295559	17246917	17295559	+	transcript517.chr8.nic@VPS37A	transcript517.chr8.nic	protein_coding	17246917,17265771,17265907,17268258,17268856,17274733,17276397,17280028,17280239,17280375,17284473,17286347,17294987	17247369,17265815,17265981,17268372,17268956,17274958,17276467,17280155,17280297,17280443,17284616,17286427,17295559	Gene ID= ENSG00000155975.9 TPM= 5.84 Transcript Type= NA
chr8	17246571	17298024	17246571	17298024	+	ENST00000324849.8@VPS37A	ENST00000324849.8	protein_coding	17246571,17265907,17268258,17268856,17274733,17276397,17280028,17280239,17280375,17284473,17286347,17294987	17247369,17265981,17268372,17268956,17274958,17276467,17280155,17280297,17280443,17284616,17286427,17298024	Gene ID= ENSG00000155975.9 TPM= 23.35 Transcript Type= protein_coding
chr8	17246931	17286611	17246931	17286611	+	transcript527.chr8.nic@VPS37A	transcript527.chr8.nic	protein_coding	17246931,17265907,17268258,17268856,17274733,17276397,17280028,17280239,17280375,17284473,17286347	17247369,17265981,17268372,17268956,17274958,17276467,17280155,17280297,17280443,17284616,17286611	Gene ID= ENSG00000155975.9 TPM= 2.34 Transcript Type= NA
chr8	17577193	17643133	17577193	17643133	+	transcript536.chr8.nic@PDGFRL	transcript536.chr8.nic	protein_coding	17577193,17589468,17621051,17628487,17634074,17642613	17577307,17589765,17621202,17628780,17634213,17643133	Gene ID= ENSG00000104213.12 TPM= 8.17 Transcript Type= NA
chr8	17643804	17801234	17643804	17801234	-	transcript539.chr8.nnic@MTUS1	transcript539.chr8.nnic	protein_coding	17801061,17753717,17743604,17723672,17715767,17713214,17684328,17675186,17655863,17654561,17653425,17653186,17649846,17646982,17643804	17801234,17755961,17743799,17723833,17715901,17713252,17684542,17675252,17656065,17654666,17653498,17653281,17649962,17647079,17646139	Gene ID= ENSG00000129422.14 TPM= 16.93 Transcript Type= NA
chr8	17643804	17801286	17643804	17801286	-	transcript542.chr8.nnic@MTUS1	transcript542.chr8.nnic	protein_coding	17801061,17753717,17743604,17715767,17713214,17684328,17675186,17655863,17654561,17653425,17653186,17649846,17646982,17643804	17801286,17755961,17743799,17715901,17713252,17684542,17675252,17656065,17654666,17653498,17653281,17649962,17647079,17646139	Gene ID= ENSG00000129422.14 TPM= 8.17 Transcript Type= NA
chr8	17643804	17801283	17643804	17801283	-	transcript546.chr8.nnic@MTUS1	transcript546.chr8.nnic	protein_coding	17801061,17743604,17715767,17713214,17684328,17675186,17655863,17654561,17653425,17653186,17649846,17646982,17643804	17801283,17743799,17715901,17713252,17684542,17675252,17656065,17654666,17653498,17653281,17649962,17647079,17646139	Gene ID= ENSG00000129422.14 TPM= 8.76 Transcript Type= NA
chr8	17643799	17697670	17643799	17697670	-	ENST00000297488.10@MTUS1	ENST00000297488.10	protein_coding	17697257,17684328,17675186,17655863,17654561,17653425,17653186,17649846,17646982,17643799	17697670,17684542,17675252,17656065,17654666,17653498,17653281,17649962,17647079,17646139	Gene ID= ENSG00000129422.14 TPM= 10.51 Transcript Type= protein_coding
chr8	17662549	17666293	17662549	17666293	+	transcript563.chr8.nnic@NA	transcript563.chr8.nnic	NA	17662549	17666293	Gene ID= novel_gene_chr8_564 TPM= 2.34 Transcript Type= NA
chr8	17701742	17703642	17701742	17703642	+	transcript565.chr8.nnic@NA	transcript565.chr8.nnic	NA	17701742	17703642	Gene ID= novel_gene_chr8_566 TPM= 2.34 Transcript Type= NA
chr8	17801354	17803300	17801354	17803300	+	transcript561.chr8.nnic@NA	transcript561.chr8.nnic	NA	17801354	17803300	Gene ID= novel_gene_chr8_562 TPM= 8.17 Transcript Type= NA
chr8	17864380	17910365	17864380	17910365	-	ENST00000398056.6@FGL1	ENST00000398056.6	protein_coding	17909885,17896170,17895447,17885492,17881999,17874362,17874019,17868916,17868548,17864380	17910365,17896416,17895517,17885571,17882179,17874521,17874116,17869004,17868735,17864751	Gene ID= ENSG00000104760.16 TPM= 1.17 Transcript Type= protein_coding
chr8	17922711	18027758	17922711	18027758	+	transcript572.chr8.nic@PCM1	transcript572.chr8.nic	protein_coding	17922711,17924713,17934706,17935589,17937134,17938740,17939691,17947186,17950615,17952970,17955470,17956604,17957264,17957540,17960014,17960315,17962034,17963101,17964568,17965999,17966328,17966980,17969577,17972329,17980591,17985447,17985959,17989859,17991542,17993483,18006263,18009547,18010609,18011237,18011667,18013964,18014584,18025361,18025544,18027637	17923188,17924780,17934858,17935706,17937379,17939009,17939861,17947363,17950724,17953186,17955653,17956777,17957421,17957775,17960165,17960444,17962174,17963291,17964768,17966218,17966473,17967170,17969748,17972687,17980755,17985619,17986087,17989979,17991700,17993619,18006397,18009744,18010668,18011366,18011827,18014036,18014840,18025453,18025658,18027758	Gene ID= ENSG00000078674.17 TPM= 3.5 Transcript Type= NA
chr8	17922844	18027758	17922844	18027758	+	transcript583.chr8.nic@PCM1	transcript583.chr8.nic	protein_coding	17922844,17924713,17935589,17937134,17938740,17939691,17940042,17947186,17950615,17952970,17955470,17956604,17957264,17957540,17960014,17960315,17962034,17963101,17964568,17965999,17966328,17966980,17969577,17972329,17985447,17985959,17989859,17991542,17993483,18006263,18009547,18010609,18011237,18011667,18013964,18014584,18025361,18025544,18027637	17923188,17924780,17935706,17937379,17939009,17939861,17940158,17947363,17950724,17953186,17955653,17956777,17957421,17957775,17960165,17960444,17962174,17963291,17964768,17966218,17966473,17967170,17969748,17972687,17985619,17986087,17989979,17991700,17993619,18006397,18009744,18010668,18011366,18011827,18014036,18014840,18025453,18025658,18027758	Gene ID= ENSG00000078674.17 TPM= 2.63 Transcript Type= NA
chr8	17922847	18027758	17922847	18027758	+	transcript590.chr8.nic@PCM1	transcript590.chr8.nic	protein_coding	17922847,17924713,17935589,17937134,17938740,17939691,17947186,17950615,17952970,17955470,17956604,17957264,17957540,17960014,17960315,17962034,17963101,17964568,17965999,17966328,17966980,17969577,17972329,17985447,17985959,17989859,17991542,17993483,18006263,18009547,18010609,18011237,18011667,18013964,18014584,18025361,18025544,18027637	17923188,17924780,17935706,17937379,17939009,17939861,17947363,17950724,17953186,17955653,17956777,17957421,17957775,17960165,17960444,17962174,17963291,17964768,17966218,17966473,17967170,17969748,17972687,17985619,17986087,17989979,17991676,17993619,18006397,18009744,18010668,18011366,18011827,18014036,18014840,18025453,18025658,18027758	Gene ID= ENSG00000078674.17 TPM= 5.55 Transcript Type= NA
chr8	17922801	17955898	17922801	17955898	+	transcript603.chr8.nic@PCM1	transcript603.chr8.nic	protein_coding	17922801,17924713,17935589,17937134,17938740,17939691,17947186,17950615,17952970,17955470	17923188,17924780,17935706,17937379,17939009,17939861,17947363,17950724,17953186,17955898	Gene ID= ENSG00000078674.17 TPM= 2.63 Transcript Type= NA
chr8	17923028	18027803	17923028	18027803	+	ENST00000519253.5@PCM1	ENST00000519253.5	protein_coding	17923028,17924713,17935589,17937134,17938740,17939691,17947186,17950615,17952970,17955470,17956604,17957264,17957540,17960014,17960315,17962034,17963101,17964568,17965999,17966328,17966980,17969577,17972329,17980591,17985447,17985959,17989859,17991542,17993483,18006263,18009547,18010609,18011237,18011667,18013964,18014584,18025361,18025544,18027637	17923188,17924780,17935706,17937379,17939009,17939861,17947363,17950724,17953186,17955653,17956777,17957421,17957775,17960165,17960444,17962174,17963291,17964768,17966218,17966473,17967170,17969748,17972687,17980755,17985619,17986087,17989979,17991676,17993619,18006397,18009744,18010668,18011366,18011827,18014036,18014840,18025453,18025658,18027803	Gene ID= ENSG00000078674.17 TPM= 8.17 Transcript Type= protein_coding
chr8	18056459	18083408	18056459	18083408	-	ENST00000636691.1@ASAH1	ENST00000636691.1	protein_coding	18083122,18075541,18071300,18069792,18067220,18064457,18063185,18062279,18061686,18061377,18059572,18059341,18058835,18056459	18083408,18075587,18071390,18069878,18067298,18064531,18063230,18062423,18061740,18061458,18059703,18059464,18058891,18057623	Gene ID= ENSG00000104763.18 TPM= 9.17 Transcript Type= protein_coding
chr8	18056455	18084998	18056455	18084998	-	ENST00000381733.9@ASAH1	ENST00000381733.9	protein_coding	18084676,18075541,18071300,18069792,18067220,18064457,18063185,18062279,18061686,18061377,18059572,18059341,18058835,18056455	18084998,18075587,18071390,18069878,18067298,18064531,18063230,18062423,18061740,18061458,18059703,18059464,18058891,18057623	Gene ID= ENSG00000104763.18 TPM= 15.59 Transcript Type= protein_coding
chr8	18056493	18084980	18056493	18084980	-	ENST00000637244.1@ASAH1	ENST00000637244.1	protein_coding	18083981,18075541,18071300,18069792,18067220,18064457,18063185,18062279,18061686,18061377,18059572,18059341,18058835,18056493	18084980,18075587,18071390,18069878,18067298,18064531,18063230,18062423,18061740,18061458,18059703,18059464,18058891,18057623	Gene ID= ENSG00000104763.18 TPM= 16.58 Transcript Type= nonsense_mediated_decay
chr8	18056452	18084108	18056452	18084108	-	ENST00000520781.6@ASAH1	ENST00000520781.6	protein_coding	18083981,18075541,18071300,18069792,18067220,18063185,18062279,18061686,18061377,18059572,18059341,18058835,18056452	18084108,18075587,18071390,18069878,18067298,18063230,18062423,18061740,18061458,18059703,18059464,18058891,18057623	Gene ID= ENSG00000104763.18 TPM= 10.57 Transcript Type= protein_coding
chr8	18056470	18084142	18056470	18084142	-	ENST00000636701.1@ASAH1	ENST00000636701.1	protein_coding	18083981,18075541,18067220,18064457,18063185,18062279,18061686,18061377,18059572,18059341,18058835,18056470	18084142,18075587,18067298,18064531,18063230,18062423,18061740,18061458,18059703,18059464,18058891,18057623	Gene ID= ENSG00000104763.18 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr8	18056462	18084091	18056462	18084091	-	ENST00000637609.1@ASAH1	ENST00000637609.1	protein_coding	18083981,18075541,18071300,18069792,18064457,18063185,18062279,18061686,18061377,18059572,18059341,18058835,18056462	18084091,18075587,18071390,18069878,18067298,18063230,18062423,18061740,18061458,18059703,18059464,18058891,18057623	Gene ID= ENSG00000104763.18 TPM= 4.44 Transcript Type= retained_intron
chr8	18066763	18084148	18066763	18084148	-	ENST00000637561.1@ASAH1	ENST00000637561.1	protein_coding	18083981,18075541,18071300,18069792,18066763	18084148,18075587,18071390,18069878,18067298	Gene ID= ENSG00000104763.18 TPM= 69.12 Transcript Type= protein_coding
chr8	18210093	18223689	18210093	18223689	+	ENST00000307719.8@NAT1	ENST00000307719.8	protein_coding	18210093,18219411,18222042	18210180,18219489,18223689	Gene ID= ENSG00000171428.13 TPM= 1.17 Transcript Type= protein_coding
chr8	19313434	19396218	19313434	19396218	+	transcript663.chr8.nic@SH2D4A	transcript663.chr8.nic	protein_coding	19313434,19319344,19332955,19334686,19361203,19364072,19373530,19393318,19394550	19313823,19319728,19333114,19334857,19361314,19364282,19373660,19393541,19396218	Gene ID= ENSG00000104611.11 TPM= 10.89 Transcript Type= NA
chr8	19313888	19396218	19313888	19396218	+	transcript667.chr8.nic@SH2D4A	transcript667.chr8.nic	protein_coding	19313888,19319344,19332955,19334686,19361203,19364072,19373530,19393318,19394550	19314079,19319728,19333114,19334857,19361314,19364282,19373660,19393541,19396218	Gene ID= ENSG00000104611.11 TPM= 7.39 Transcript Type= NA
chr8	19313976	19394953	19313976	19394953	+	ENST00000519207.5@SH2D4A	ENST00000519207.5	protein_coding	19313976,19319344,19332955,19334686,19357203,19361203,19364072,19373530,19393318,19394550	19314079,19319728,19333114,19334857,19357283,19361314,19364282,19373660,19393541,19394953	Gene ID= ENSG00000104611.11 TPM= 1.17 Transcript Type= protein_coding
chr8	19404161	19602697	19404161	19602697	-	transcript669.chr8.nic@CSGALNACT1	transcript669.chr8.nic	protein_coding	19601992,19601771,19505201,19458426,19439830,19420340,19418656,19408613,19404161	19602697,19601865,19506130,19458642,19439931,19420518,19418750,19408694,19406069	Gene ID= ENSG00000147408.14 TPM= 4.67 Transcript Type= NA
chr8	19404161	19757410	19404161	19757410	-	transcript670.chr8.nic@CSGALNACT1	transcript670.chr8.nic	protein_coding	19757186,19601771,19505201,19458426,19439830,19420340,19418656,19408613,19404161	19757410,19601865,19506130,19458642,19439931,19420518,19418750,19408694,19406069	Gene ID= ENSG00000147408.14 TPM= 11.68 Transcript Type= NA
chr8	19817418	19852061	19817418	19852061	+	transcript681.chr8.nnic@INTS10	transcript681.chr8.nnic	protein_coding	19817418,19818275,19819573,19820379,19822439,19823301,19823873,19824803,19826426,19830406,19832028,19833169,19837052,19842848,19844076,19845704,19847394,19851649	19817666,19818342,19819676,19820518,19822520,19823441,19824044,19824972,19826559,19830559,19832110,19833321,19837160,19842927,19844238,19845797,19849239,19852061	Gene ID= ENSG00000104613.11 TPM= 2.34 Transcript Type= NA
chr8	19817425	19852061	19817425	19852061	+	transcript682.chr8.nic@INTS10	transcript682.chr8.nic	protein_coding	19817425,19818275,19819573,19820379,19822439,19823301,19823873,19824803,19826426,19830406,19832028,19833169,19837052,19842848,19844076,19845704,19849162,19851649	19817666,19818342,19819676,19820518,19822520,19823441,19824044,19824972,19826559,19830559,19832110,19833321,19837160,19842927,19844238,19845797,19849239,19852061	Gene ID= ENSG00000104613.11 TPM= 7.01 Transcript Type= NA
chr8	19817140	19852078	19817140	19852078	+	ENST00000397977.7@INTS10	ENST00000397977.7	protein_coding	19817140,19818275,19819573,19820379,19822439,19823301,19823873,19824803,19826426,19830406,19832028,19833169,19837052,19842848,19844076,19845704,19851649	19817666,19818342,19819676,19820518,19822520,19823441,19824044,19824972,19826559,19830559,19832110,19833321,19837160,19842927,19844238,19845797,19852078	Gene ID= ENSG00000104613.11 TPM= 58.38 Transcript Type= protein_coding
chr8	19817279	19846283	19817279	19846283	+	transcript687.chr8.nic@INTS10	transcript687.chr8.nic	protein_coding	19817279,19818275,19819573,19820379,19822439,19823301,19823873,19824803,19826426,19830406,19832028,19833169,19837052,19842848,19844076,19845704	19817666,19818342,19819676,19820518,19822520,19823441,19824044,19824972,19826559,19830559,19832110,19833321,19837160,19842927,19844238,19846283	Gene ID= ENSG00000104613.11 TPM= 3.5 Transcript Type= NA
chr8	19817450	19824492	19817450	19824492	+	transcript696.chr8.nic@INTS10	transcript696.chr8.nic	protein_coding	19817450,19818275,19819573,19820379,19822439,19823301,19823873	19817666,19818342,19819676,19820518,19822520,19823441,19824492	Gene ID= ENSG00000104613.11 TPM= 2.34 Transcript Type= NA
chr8	19938971	19967258	19938971	19967258	+	ENST00000311322.8@LPL	ENST00000311322.8	protein_coding	19938971,19948180,19951769,19953310,19954120,19955841,19959260,19960901,19962115,19965310	19939528,19948340,19951948,19953421,19954353,19956083,19959380,19961083,19962219,19967258	Gene ID= ENSG00000175445.14 TPM= 247.53 Transcript Type= protein_coding
chr8	19944138	19947224	19944138	19947224	-	transcript709.chr8.nnic@NA	transcript709.chr8.nnic	NA	19944138	19947224	Gene ID= novel_gene_chr8_710 TPM= 2.34 Transcript Type= NA
chr8	20197367	20221701	20197367	20221701	+	ENST00000276390.6@ATP6V1B2	ENST00000276390.6	protein_coding	20197367,20204484,20209433,20210346,20210569,20211177,20211652,20212102,20212782,20214818,20216413,20217220,20218153,20220263	20197542,20204539,20209531,20210439,20210646,20211316,20211753,20212199,20212905,20214968,20216495,20217324,20218282,20221701	Gene ID= ENSG00000147416.10 TPM= 524.03 Transcript Type= protein_coding
chr8	20197403	20221689	20197403	20221689	+	ENST00000523482.5@ATP6V1B2	ENST00000523482.5	protein_coding	20197403,20204484,20209433,20210346,20210569,20211177,20211652,20212102,20212782,20218153,20220263	20197542,20204539,20209531,20210439,20210646,20211316,20211753,20212199,20217324,20218282,20221689	Gene ID= ENSG00000147416.10 TPM= 2.5 Transcript Type= retained_intron
chr8	20246165	20303963	20246165	20303963	-	ENST00000381569.5@LZTS1	ENST00000381569.5	protein_coding	20303740,20254837,20252782,20246165	20303963,20255315,20253585,20250363	Gene ID= ENSG00000061337.15 TPM= 7.01 Transcript Type= protein_coding
chr8	21908873	21913860	21908873	21913860	-	ENST00000276420.8@DOK2	ENST00000276420.8	protein_coding	21913539,21912229,21911901,21910673,21908873	21913860,21912510,21911988,21910857,21909931	Gene ID= ENSG00000147443.12 TPM= 78.03 Transcript Type= protein_coding
chr8	21908873	21913688	21908873	21913688	-	transcript748.chr8.nic@DOK2	transcript748.chr8.nic	protein_coding	21912229,21911901,21910673,21908873	21913688,21911988,21910857,21909931	Gene ID= ENSG00000147443.12 TPM= 12.65 Transcript Type= NA
chr8	21908873	21913696	21908873	21913696	-	transcript749.chr8.nnic@DOK2	transcript749.chr8.nnic	protein_coding	21913539,21911901,21910673,21908873	21913696,21911988,21910857,21909931	Gene ID= ENSG00000147443.12 TPM= 15.56 Transcript Type= NA
chr8	22042398	22048806	22042398	22048806	+	ENST00000518533.5@FGF17	ENST00000518533.5	protein_coding	22042398,22043145,22046147,22046527,22047956	22042963,22043181,22046291,22046633,22048806	Gene ID= ENSG00000158815.10 TPM= 2.34 Transcript Type= protein_coding
chr8	22048931	22082524	22048931	22082524	+	transcript758.chr8.nic@DMTN	transcript758.chr8.nic	protein_coding	22048931,22066705,22067085,22067527,22069016,22069419,22069881,22070182,22072326,22073730,22080180,22080412,22080618,22080805,22081113,22081350	22049224,22066893,22067159,22067682,22069060,22069518,22069937,22070334,22072450,22073835,22080244,22080460,22080625,22080870,22081193,22082524	Gene ID= ENSG00000158856.18 TPM= 12.39 Transcript Type= NA
chr8	22048931	22082524	22048931	22082524	+	transcript759.chr8.nic@DMTN	transcript759.chr8.nic	protein_coding	22048931,22066838,22067085,22067527,22069016,22069419,22069881,22070182,22072326,22073730,22080180,22080412,22080795,22080802,22081113,22081350	22049224,22066893,22067159,22067682,22069060,22069518,22069937,22070334,22072450,22073835,22080244,22080460,22080799,22080870,22081193,22082524	Gene ID= ENSG00000158856.18 TPM= 4.02 Transcript Type= NA
chr8	22048931	22082524	22048931	22082524	+	transcript760.chr8.nic@DMTN	transcript760.chr8.nic	protein_coding	22048931,22066705,22067085,22067527,22069016,22069419,22069881,22070182,22072326,22073730,22080180,22080412,22080618,22081113,22081350	22049224,22066893,22067159,22067682,22069060,22069518,22069937,22070334,22072450,22073835,22080244,22080460,22080625,22081193,22082524	Gene ID= ENSG00000158856.18 TPM= 19.59 Transcript Type= NA
chr8	22049003	22082524	22049003	22082524	+	transcript762.chr8.nic@DMTN	transcript762.chr8.nic	protein_coding	22049003,22066838,22067085,22067527,22069016,22069419,22069881,22070182,22072326,22073730,22080180,22080412,22080618,22081113,22081350	22049224,22066893,22067159,22067682,22069060,22069518,22069937,22070334,22072450,22073835,22080244,22080460,22080625,22081193,22082524	Gene ID= ENSG00000158856.18 TPM= 4.41 Transcript Type= NA
chr8	22066427	22082524	22066427	22082524	+	transcript764.chr8.nic@DMTN	transcript764.chr8.nic	protein_coding	22066427,22067085,22067527,22069016,22069419,22069881,22070182,22072326,22073730,22080180,22080412,22080618,22080805,22081113,22081350	22066893,22067159,22067682,22069060,22069518,22069937,22070334,22072450,22073835,22080244,22080460,22080625,22080870,22081193,22082524	Gene ID= ENSG00000158856.18 TPM= 8.89 Transcript Type= NA
chr8	22048993	22082524	22048993	22082524	+	transcript765.chr8.nic@DMTN	transcript765.chr8.nic	protein_coding	22048993,22066705,22067527,22069016,22069419,22069881,22070182,22072326,22073730,22080180,22080412,22080618,22081113,22081350	22049224,22066893,22067682,22069060,22069518,22069937,22070334,22072450,22073835,22080244,22080460,22080625,22081193,22082524	Gene ID= ENSG00000158856.18 TPM= 4.6 Transcript Type= NA
chr8	22066495	22082524	22066495	22082524	+	transcript767.chr8.nic@DMTN	transcript767.chr8.nic	protein_coding	22066495,22067085,22067527,22069016,22069419,22069881,22070182,22072326,22073730,22080180,22080412,22080618,22081113,22081350	22066893,22067159,22067682,22069060,22069518,22069937,22070334,22072450,22073835,22080244,22080460,22080625,22081193,22082524	Gene ID= ENSG00000158856.18 TPM= 4.41 Transcript Type= NA
chr8	22066496	22082524	22066496	22082524	+	transcript768.chr8.nic@DMTN	transcript768.chr8.nic	protein_coding	22066496,22067527,22069016,22069419,22069881,22070182,22072326,22073730,22080180,22080412,22080618,22080805,22081113,22081350	22066893,22067682,22069060,22069518,22069937,22070334,22072450,22073835,22080244,22080460,22080625,22080870,22081193,22082524	Gene ID= ENSG00000158856.18 TPM= 5.97 Transcript Type= NA
chr8	22066496	22082524	22066496	22082524	+	transcript770.chr8.nic@DMTN	transcript770.chr8.nic	protein_coding	22066496,22067527,22069016,22069419,22069881,22070182,22072326,22073730,22080180,22080412,22080618,22081113,22081350	22066893,22067682,22069060,22069518,22069937,22070334,22072450,22073835,22080244,22080460,22080625,22081193,22082524	Gene ID= ENSG00000158856.18 TPM= 4.6 Transcript Type= NA
chr8	22089159	22104379	22089159	22104379	+	transcript775.chr8.nic@FAM160B2	transcript775.chr8.nic	protein_coding	22089159,22089761,22094440,22096337,22097516,22097717,22098068,22098423,22098948,22099284,22099704,22100594,22100844,22101440,22101708,22102175,22102528,22102793	22089298,22089854,22094518,22096509,22097620,22097839,22098310,22098619,22099056,22099360,22099893,22100739,22100972,22101530,22101851,22102315,22102628,22104379	Gene ID= ENSG00000158863.21 TPM= 18.68 Transcript Type= NA
chr8	22101743	22104379	22101743	22104379	+	transcript781.chr8.nnic@FAM160B2	transcript781.chr8.nnic	protein_coding	22101743,22101976,22102175,22102528,22102793	22101851,22102062,22102315,22102628,22104379	Gene ID= ENSG00000158863.21 TPM= 25.69 Transcript Type= NA
chr8	22089154	22097034	22089154	22097034	+	transcript783.chr8.nic@FAM160B2	transcript783.chr8.nic	protein_coding	22089154,22094440,22096337	22089854,22094518,22097034	Gene ID= ENSG00000158863.21 TPM= 2.34 Transcript Type= NA
chr8	22092567	22096290	22092567	22096290	-	transcript794.chr8.nnic@NA	transcript794.chr8.nnic	NA	22092567	22096290	Gene ID= novel_gene_chr8_795 TPM= 3.5 Transcript Type= NA
chr8	22106872	22109397	22106872	22109397	-	ENST00000611621.1@NUDT18	ENST00000611621.1	protein_coding	22109139,22108133,22106872	22109397,22108346,22107895	Gene ID= ENSG00000275074.1 TPM= 12.26 Transcript Type= protein_coding
chr8	22106874	22109419	22106874	22109419	-	ENST00000613958.1@NUDT18	ENST00000613958.1	protein_coding	22109139,22106874	22109419,22108346	Gene ID= ENSG00000275074.1 TPM= 4.09 Transcript Type= protein_coding
chr8	22138020	22141951	22138020	22141951	-	ENST00000306306.7@REEP4	ENST00000306306.7	protein_coding	22141451,22140625,22140172,22139963,22139416,22138926,22138639,22138020	22141951,22140697,22140248,22140083,22139529,22139061,22138793,22138552	Gene ID= ENSG00000168476.11 TPM= 27.49 Transcript Type= protein_coding
chr8	22138020	22141861	22138020	22141861	-	transcript813.chr8.nic@REEP4	transcript813.chr8.nic	protein_coding	22140625,22140172,22139963,22139416,22138926,22138639,22138020	22141861,22140248,22140083,22139529,22139061,22138793,22138552	Gene ID= ENSG00000168476.11 TPM= 2.97 Transcript Type= NA
chr8	22138020	22141946	22138020	22141946	-	transcript815.chr8.nic@REEP4	transcript815.chr8.nic	protein_coding	22141451,22140625,22140172,22139963,22138926,22138639,22138020	22141946,22140697,22140248,22140083,22139529,22138793,22138552	Gene ID= ENSG00000168476.11 TPM= 2.97 Transcript Type= NA
chr8	22138020	22141920	22138020	22141920	-	transcript839.chr8.nic@REEP4	transcript839.chr8.nic	protein_coding	22140625,22140172,22139963,22138926,22138639,22138020	22141920,22140248,22140083,22139529,22138793,22138552	Gene ID= ENSG00000168476.11 TPM= 3.84 Transcript Type= NA
chr8	22138020	22141946	22138020	22141946	-	transcript840.chr8.nic@REEP4	transcript840.chr8.nic	protein_coding	22141451,22140625,22140172,22138926,22138639,22138020	22141946,22140697,22140248,22140083,22138793,22138552	Gene ID= ENSG00000168476.11 TPM= 4.13 Transcript Type= NA
chr8	22138020	22141838	22138020	22141838	-	transcript863.chr8.nic@REEP4	transcript863.chr8.nic	protein_coding	22140625,22140172,22138926,22138639,22138020	22141838,22140248,22140083,22138793,22138552	Gene ID= ENSG00000168476.11 TPM= 2.67 Transcript Type= NA
chr8	22138020	22141859	22138020	22141859	-	transcript887.chr8.nic@REEP4	transcript887.chr8.nic	protein_coding	22140172,22138926,22138639,22138020	22141859,22140083,22138793,22138552	Gene ID= ENSG00000168476.11 TPM= 2.67 Transcript Type= NA
chr8	22146830	22152759	22146830	22152759	-	transcript899.chr8.nic@LGI3	transcript899.chr8.nic	protein_coding	22151489,22146830	22152759,22148977	Gene ID= ENSG00000168481.8 TPM= 35.61 Transcript Type= NA
chr8	22146825	22156832	22146825	22156832	-	ENST00000306317.6@LGI3	ENST00000306317.6	protein_coding	22156337,22155392,22154560,22154142,22153968,22151831,22151489,22146825	22156832,22155463,22154631,22154213,22154039,22152000,22151653,22148977	Gene ID= ENSG00000168481.8 TPM= 95.16 Transcript Type= protein_coding
chr8	22156945	22164479	22156945	22164479	+	transcript799.chr8.nic@SFTPC	transcript799.chr8.nic	protein_coding	22156945,22159475,22161776,22162574,22163080,22163436,22163883,22164266	22157675,22159855,22161870,22162732,22163202,22163546,22164051,22164479	Gene ID= ENSG00000168484.12 TPM= 6812.71 Transcript Type= NA
chr8	22161655	22164476	22161655	22164476	+	ENST00000318561.7@SFTPC	ENST00000318561.7	protein_coding	22161655,22162574,22163080,22163436,22163883,22164266	22161870,22162732,22163202,22163546,22164059,22164476	Gene ID= ENSG00000168484.12 TPM= 13071.25 Transcript Type= protein_coding
chr8	22161797	22164479	22161797	22164479	+	ENST00000521315.5@SFTPC	ENST00000521315.5	protein_coding	22161797,22162574,22163080,22163436,22163901	22161870,22162732,22163202,22163546,22164479	Gene ID= ENSG00000168484.12 TPM= 3321.02 Transcript Type= protein_coding
chr8	22161807	22164479	22161807	22164479	+	ENST00000524255.5@SFTPC	ENST00000524255.5	protein_coding	22161807,22163080,22163436,22163883,22164266	22161870,22163202,22163546,22164051,22164479	Gene ID= ENSG00000168484.12 TPM= 313.7 Transcript Type= protein_coding
chr8	22165187	22212324	22165187	22212324	+	ENST00000520970.5@BMP1	ENST00000520970.5	protein_coding	22165187,22173602,22176143,22176533,22176961,22177852,22179705,22180368,22192049,22194058,22194445,22194724,22195462,22196680,22197240,22201118,22207303,22209445,22211594	22165553,22173715,22176313,22176650,22177139,22177957,22179829,22180483,22192151,22194174,22194590,22194919,22195587,22196840,22197420,22201928,22207516,22209695,22212324	Gene ID= ENSG00000168487.17 TPM= 11.68 Transcript Type= nonsense_mediated_decay
chr8	22168898	22170934	22168898	22170934	+	transcript914.chr8.nnic@NA	transcript914.chr8.nnic	NA	22168898	22170934	Gene ID= novel_gene_chr8_915 TPM= 5.84 Transcript Type= NA
chr8	22172609	22174247	22172609	22174247	-	transcript918.chr8.nnic@NA	transcript918.chr8.nnic	NA	22172609	22174247	Gene ID= novel_gene_chr8_919 TPM= 46.7 Transcript Type= NA
chr8	22188179	22190293	22188179	22190293	-	transcript920.chr8.nnic@NA	transcript920.chr8.nnic	NA	22188179	22190293	Gene ID= novel_gene_chr8_921 TPM= 17.51 Transcript Type= NA
chr8	22209991	22212324	22209991	22212324	+	transcript916.chr8.nnic@NA	transcript916.chr8.nnic	NA	22209991	22212324	Gene ID= novel_gene_chr8_917 TPM= 7.01 Transcript Type= NA
chr8	22245104	22251167	22245104	22251167	+	ENST00000306433.8@POLR3D	ENST00000306433.8	protein_coding	22245104,22245445,22247221,22247857,22248154,22248481,22249044,22250075,22250396	22245183,22245614,22247264,22248008,22248278,22248649,22249309,22250227,22251167	Gene ID= ENSG00000168495.12 TPM= 24.52 Transcript Type= protein_coding
chr8	22245109	22251167	22245109	22251167	+	transcript925.chr8.nic@POLR3D	transcript925.chr8.nic	protein_coding	22245109,22245445,22247221,22247857,22248154,22248481,22250075,22250396	22245183,22245614,22247264,22248008,22248278,22248649,22250227,22251167	Gene ID= ENSG00000168495.12 TPM= 3.5 Transcript Type= NA
chr8	22245235	22254600	22245235	22254600	+	ENST00000397802.8@POLR3D	ENST00000397802.8	protein_coding	22245235,22247221,22247857,22248154,22248481,22249044,22250075,22250396	22245614,22247264,22248008,22248278,22248649,22249309,22250227,22254600	Gene ID= ENSG00000168495.12 TPM= 10.51 Transcript Type= protein_coding
chr8	22367276	22422685	22367276	22422685	+	transcript928.chr8.nnic@SLC39A14	transcript928.chr8.nnic	protein_coding	22367276,22390730,22393054,22404696,22408310,22412037,22414780,22415769,22416073,22417651,22419552	22367408,22390847,22393232,22404980,22408496,22412206,22414902,22415957,22416280,22417835,22422685	Gene ID= ENSG00000104635.13 TPM= 4.47 Transcript Type= NA
chr8	22367276	22422685	22367276	22422685	+	transcript930.chr8.nnic@SLC39A14	transcript930.chr8.nnic	protein_coding	22367276,22390730,22404696,22408310,22412037,22414780,22415769,22416073,22417651,22419552	22367408,22390847,22404980,22408496,22412206,22414902,22415957,22416280,22417835,22422685	Gene ID= ENSG00000104635.13 TPM= 4.47 Transcript Type= NA
chr8	22367249	22422685	22367249	22422685	+	ENST00000359741.9@SLC39A14	ENST00000359741.9	protein_coding	22367249,22404696,22408310,22409946,22414780,22415769,22416073,22417651,22419552	22367408,22404980,22408496,22410115,22414902,22415957,22416280,22417835,22422685	Gene ID= ENSG00000104635.13 TPM= 3.89 Transcript Type= protein_coding
chr8	22367305	22422741	22367305	22422741	+	ENST00000381237.5@SLC39A14	ENST00000381237.5	protein_coding	22367305,22404696,22408310,22412037,22414780,22415769,22416073,22417651,22419552	22367408,22404980,22408496,22412206,22414902,22415957,22416280,22417835,22422741	Gene ID= ENSG00000104635.13 TPM= 5.84 Transcript Type= protein_coding
chr8	22440989	22541125	22440989	22541125	+	transcript936.chr8.nnic@PPP3CC	transcript936.chr8.nnic	protein_coding	22440989,22474954,22475500,22498001,22511086,22513293,22522491,22522655,22523643,22527392,22528506,22532225,22532921,22539469,22540615	22441458,22475151,22475624,22498112,22511231,22513432,22522568,22522749,22523756,22527517,22528577,22532306,22533018,22539498,22541125	Gene ID= ENSG00000120910.14 TPM= 3.5 Transcript Type= NA
chr8	22440819	22522813	22440819	22522813	+	ENST00000518852.5@PPP3CC	ENST00000518852.5	protein_coding	22440819,22474954,22475500,22498001,22511086,22513293,22522491,22522655	22441458,22475151,22475624,22498112,22511231,22513432,22522568,22522813	Gene ID= ENSG00000120910.14 TPM= 3.5 Transcript Type= protein_coding
chr8	22441072	22514271	22441072	22514271	+	transcript952.chr8.nic@PPP3CC	transcript952.chr8.nic	protein_coding	22441072,22474954,22475500,22498001,22511086,22513293	22441458,22475151,22475624,22498112,22511231,22514271	Gene ID= ENSG00000120910.14 TPM= 2.34 Transcript Type= NA
chr8	22441075	22499467	22441075	22499467	+	transcript954.chr8.nic@PPP3CC	transcript954.chr8.nic	protein_coding	22441075,22474954,22475500,22498001	22441458,22475151,22475624,22499467	Gene ID= ENSG00000120910.14 TPM= 2.34 Transcript Type= NA
chr8	22441083	22541125	22441083	22541125	+	ENST00000240139.9@PPP3CC	ENST00000240139.9	protein_coding	22441083,22474954,22475500,22498001,22511086,22513293,22522491,22522655,22527392,22528506,22532225,22532921,22539469,22540615	22441458,22475151,22475624,22498112,22511231,22513432,22522568,22522749,22527517,22528577,22532306,22533018,22539498,22541125	Gene ID= ENSG00000120910.14 TPM= 10.51 Transcript Type= protein_coding
chr8	22441124	22541142	22441124	22541142	+	ENST00000289963.12@PPP3CC	ENST00000289963.12	protein_coding	22441124,22474954,22475500,22498001,22511086,22513293,22522491,22522655,22527392,22528506,22532225,22532921,22540615	22441458,22475151,22475624,22498112,22511231,22513432,22522568,22522749,22527517,22528577,22532306,22533018,22541142	Gene ID= ENSG00000120910.14 TPM= 4.67 Transcript Type= protein_coding
chr8	22464978	22471259	22464978	22471259	-	transcript956.chr8.nnic@NA	transcript956.chr8.nnic	NA	22464978	22471259	Gene ID= novel_gene_chr8_957 TPM= 5.84 Transcript Type= NA
chr8	22551323	22575495	22551323	22575495	+	transcript960.chr8.nic@SORBS3	transcript960.chr8.nic	protein_coding	22551323,22554452,22554908,22556715,22558129,22561335,22561865,22563987,22564283,22564468,22565268,22565826,22566345,22566661,22566822,22567061,22569148,22570910,22571718,22572340,22574667	22552022,22554608,22554980,22556908,22558192,22561373,22561931,22564077,22564369,22564521,22565354,22565872,22566484,22566713,22566868,22567175,22569273,22571221,22571821,22572446,22575495	Gene ID= ENSG00000120896.13 TPM= 15.32 Transcript Type= NA
chr8	22551695	22575788	22551695	22575788	+	ENST00000240123.11@SORBS3	ENST00000240123.11	protein_coding	22551695,22554452,22554863,22556715,22558129,22561335,22561865,22563987,22564283,22564468,22565268,22565826,22566345,22566661,22566822,22567061,22569148,22570910,22571718,22572340,22574667	22552022,22554608,22554980,22556908,22558192,22561373,22561931,22564077,22564369,22564521,22565354,22565872,22566484,22566713,22566868,22567175,22569273,22571221,22571821,22572446,22575788	Gene ID= ENSG00000120896.13 TPM= 12.11 Transcript Type= protein_coding
chr8	22565133	22575495	22565133	22575495	+	transcript967.chr8.nic@SORBS3	transcript967.chr8.nic	protein_coding	22565133,22565826,22566345,22566661,22566822,22567061,22569148,22570910,22571718,22572340,22574667	22565354,22565872,22566484,22566713,22566868,22567175,22569273,22571221,22571821,22572446,22575495	Gene ID= ENSG00000120896.13 TPM= 30.1 Transcript Type= NA
chr8	22565911	22575495	22565911	22575495	+	transcript971.chr8.nic@SORBS3	transcript971.chr8.nic	protein_coding	22565911,22566345,22566661,22566822,22567061,22569148,22570910,22571718,22572340,22574667	22566243,22566484,22566713,22566868,22567175,22569273,22571221,22571821,22572446,22575495	Gene ID= ENSG00000120896.13 TPM= 25.04 Transcript Type= NA
chr8	22565935	22575495	22565935	22575495	+	transcript972.chr8.nnic@SORBS3	transcript972.chr8.nnic	protein_coding	22565935,22566345,22566661,22566822,22567061,22569148,22570910,22571718,22572340,22574667	22566193,22566484,22566713,22566868,22567175,22569273,22571221,22571821,22572446,22575495	Gene ID= ENSG00000120896.13 TPM= 23.88 Transcript Type= NA
chr8	22551723	22560072	22551723	22560072	+	transcript978.chr8.nic@SORBS3	transcript978.chr8.nic	protein_coding	22551723,22554452,22554863,22556715,22558129	22552022,22554608,22554980,22556908,22560072	Gene ID= ENSG00000120896.13 TPM= 5.64 Transcript Type= NA
chr8	22578741	22594298	22578741	22594298	+	ENST00000308354.11@PDLIM2	ENST00000308354.11	protein_coding	22578741,22580603,22581379,22584821,22585017,22585321,22589298,22589596,22591551,22593733	22579527,22580697,22581530,22584890,22585162,22585399,22589374,22589741,22591668,22594298	Gene ID= ENSG00000120913.23 TPM= 111.31 Transcript Type= protein_coding
chr8	22579130	22594298	22579130	22594298	+	transcript1002.chr8.nic@PDLIM2	transcript1002.chr8.nic	protein_coding	22579130,22580603,22581379,22584821,22585017,22585321,22589298,22589596,22591551,22593733	22579209,22580697,22581530,22584890,22585162,22585399,22589374,22589741,22591668,22594298	Gene ID= ENSG00000120913.23 TPM= 35.41 Transcript Type= NA
chr8	22579150	22594265	22579150	22594265	+	ENST00000397761.6@PDLIM2	ENST00000397761.6	protein_coding	22579150,22580603,22581379,22584821,22585017,22585321,22589298,22589596,22591551,22593733	22579224,22580697,22581530,22584890,22585162,22585399,22589374,22589741,22591668,22594265	Gene ID= ENSG00000120913.23 TPM= 11.68 Transcript Type= protein_coding
chr8	22599601	22604133	22599601	22604133	+	ENST00000409586.7@C8orf58	ENST00000409586.7	protein_coding	22599601,22600882,22601712,22601972,22602200,22602561,22603195	22599760,22601357,22601852,22602080,22602312,22602643,22604133	Gene ID= ENSG00000241852.9 TPM= 11.29 Transcript Type= protein_coding
chr8	22599601	22604150	22599601	22604150	+	ENST00000614574.4@C8orf58	ENST00000614574.4	protein_coding	22599601,22600882,22601712,22601972,22602200,22603195	22599760,22601357,22601852,22602080,22602312,22604150	Gene ID= ENSG00000241852.9 TPM= 5.45 Transcript Type= protein_coding
chr8	22599647	22604150	22599647	22604150	+	ENST00000289989.9@C8orf58	ENST00000289989.9	protein_coding	22599647,22600882,22601712,22601972,22602200,22602537,22603195	22599760,22601357,22601852,22602080,22602312,22602643,22604150	Gene ID= ENSG00000241852.9 TPM= 6.62 Transcript Type= protein_coding
chr8	22604632	22621514	22604632	22621514	+	ENST00000308511.8@CCAR2	ENST00000308511.8	protein_coding	22604632,22605736,22606085,22606607,22606910,22607196,22607969,22613017,22614092,22614390,22614838,22615425,22615682,22616012,22617420,22617696,22618349,22618617,22618827,22619150,22619638	22604842,22605831,22606176,22606698,22607024,22607325,22608065,22613136,22614314,22614503,22615001,22615596,22615912,22616248,22617564,22617778,22618495,22618728,22619015,22619355,22621514	Gene ID= ENSG00000158941.16 TPM= 9.14 Transcript Type= protein_coding
chr8	22604750	22620468	22604750	22620468	+	transcript989.chr8.nic@CCAR2	transcript989.chr8.nic	protein_coding	22604750,22605736,22606085,22606607,22606910,22607196,22607969,22613017,22614092,22614390,22614838,22615425,22615682,22616012,22617420,22617696,22618349,22618617,22618827,22619150	22604842,22605831,22606176,22606698,22607024,22607325,22608065,22613136,22614314,22614503,22615001,22615596,22615912,22616248,22617564,22617778,22618495,22618728,22619015,22620468	Gene ID= ENSG00000158941.16 TPM= 9.14 Transcript Type= NA
chr8	22605038	22620471	22605038	22620471	+	ENST00000389279.7@CCAR2	ENST00000389279.7	protein_coding	22605038,22605736,22606085,22606607,22606910,22607196,22607969,22613017,22614092,22614390,22614838,22615425,22615682,22616012,22617420,22617696,22618349,22618617,22618827,22619150,22619638	22605418,22605831,22606176,22606698,22607024,22607325,22608065,22613136,22614314,22614503,22615001,22615596,22615912,22616248,22617564,22617778,22618495,22618728,22619015,22619355,22620471	Gene ID= ENSG00000158941.16 TPM= 55.26 Transcript Type= protein_coding
chr8	22620712	22669125	22620712	22669125	-	transcript1013.chr8.nic@BIN3	transcript1013.chr8.nic	protein_coding	22669044,22644755,22636922,22630442,22629964,22624222,22623915,22620712	22669125,22644803,22636962,22630578,22630004,22624363,22624049,22621568	Gene ID= ENSG00000147439.12 TPM= 4.67 Transcript Type= NA
chr8	22679013	22684009	22679013	22684009	-	ENST00000566457.1@AC105046.1	ENST00000566457.1	sense_overlapping	22679013	22684009	Gene ID= ENSG00000261026.1 TPM= 1.17 Transcript Type= sense_overlapping
chr8	22687728	22691144	22687728	22691144	-	transcript1037.chr8.nnic@NA	transcript1037.chr8.nnic	NA	22687728	22691144	Gene ID= novel_gene_chr8_1038 TPM= 10.51 Transcript Type= NA
chr8	22924358	22928019	22924358	22928019	-	transcript1046.chr8.nnic@PEBP4	transcript1046.chr8.nnic	protein_coding	22927823,22927584,22924358	22928019,22927720,22925335	Gene ID= ENSG00000134020.7 TPM= 8.17 Transcript Type= NA
chr8	22926682	22927883	22926682	22927883	-	transcript1047.chr8.nnic@PEBP4	transcript1047.chr8.nnic	protein_coding	22927823,22927584,22926682	22927883,22927720,22927052	Gene ID= ENSG00000134020.7 TPM= 4.67 Transcript Type= NA
chr8	22713251	22927908	22713251	22927908	-	ENST00000256404.7@PEBP4	ENST00000256404.7	protein_coding	22927823,22927584,22920184,22817637,22727175,22724843,22713251	22927908,22927720,22920310,22817735,22727220,22724956,22713536	Gene ID= ENSG00000134020.7 TPM= 157.63 Transcript Type= protein_coding
chr8	22749807	22753956	22749807	22753956	-	transcript1049.chr8.nnic@NA	transcript1049.chr8.nnic	NA	22749807	22753956	Gene ID= novel_gene_chr8_1050 TPM= 2.34 Transcript Type= NA
chr8	23006381	23019335	23006381	23019335	-	ENST00000502083.2@AC107959.1	ENST00000502083.2	antisense_RNA	23019128,23006381	23019335,23008117	Gene ID= ENSG00000245025.2 TPM= 2.34 Transcript Type= antisense_RNA
chr8	22999579	23020199	22999579	23020199	+	ENST00000251822.6@RHOBTB2	ENST00000251822.6	protein_coding	22999579,23004425,23005372,23005960,23006728,23007993,23010538,23014690,23015638,23017252	23000105,23004626,23005475,23006145,23007746,23008111,23010688,23014778,23015743,23020199	Gene ID= ENSG00000008853.16 TPM= 434.93 Transcript Type= protein_coding
chr8	23009954	23020199	23009954	23020199	+	transcript1080.chr8.nnic@RHOBTB2	transcript1080.chr8.nnic	protein_coding	23009954,23010538,23014690,23015638,23017252	23010131,23010688,23014778,23015743,23020199	Gene ID= ENSG00000008853.16 TPM= 150.62 Transcript Type= NA
chr8	22999642	23005931	22999642	23005931	-	transcript1090.chr8.nnic@NA	transcript1090.chr8.nnic	NA	22999642	23005931	Gene ID= novel_gene_chr8_1091 TPM= 7.59 Transcript Type= NA
chr8	23020133	23069179	23020133	23069179	-	ENST00000276431.8@TNFRSF10B	ENST00000276431.8	protein_coding	23068751,23043138,23030759,23029610,23028331,23027722,23027133,23024188,23020133	23069179,23043243,23030872,23029721,23028602,23027753,23027288,23024260,23022984	Gene ID= ENSG00000120889.12 TPM= 52.74 Transcript Type= protein_coding
chr8	23022311	23069021	23022311	23069021	-	ENST00000347739.3@TNFRSF10B	ENST00000347739.3	protein_coding	23068751,23043138,23030759,23029610,23028529,23028331,23027722,23027133,23024188,23022311	23069021,23043243,23030872,23029721,23028602,23028441,23027753,23027288,23024260,23022984	Gene ID= ENSG00000120889.12 TPM= 3.5 Transcript Type= protein_coding
chr8	23102921	23122006	23102921	23122006	+	transcript1095.chr8.nnic@TNFRSF10C	transcript1095.chr8.nnic	protein_coding	23102921,23111720,23114657,23115508,23116641,23120028	23103181,23111825,23114770,23115616,23117077,23122006	Gene ID= ENSG00000173535.13 TPM= 7.01 Transcript Type= NA
chr8	23102590	23117437	23102590	23117437	+	ENST00000356864.3@TNFRSF10C	ENST00000356864.3	protein_coding	23102590,23111720,23114657,23115508,23116641	23103181,23111825,23114770,23115616,23117437	Gene ID= ENSG00000173535.13 TPM= 16.35 Transcript Type= protein_coding
chr8	23135588	23164030	23135588	23164030	-	ENST00000312584.3@TNFRSF10D	ENST00000312584.3	protein_coding	23163786,23154874,23148438,23146961,23145668,23145058,23144450,23138188,23135588	23164030,23154979,23148551,23147072,23145921,23145089,23144635,23138260,23138003	Gene ID= ENSG00000173530.5 TPM= 31.53 Transcript Type= protein_coding
chr8	23190452	23225126	23190452	23225126	-	ENST00000221132.7@TNFRSF10A	ENST00000221132.7	protein_coding	23224756,23212116,23202648,23201808,23200687,23200505,23199886,23199266,23197132,23190452	23225126,23212212,23202761,23201919,23200760,23200600,23199917,23199448,23197204,23192013	Gene ID= ENSG00000104689.9 TPM= 4.67 Transcript Type= protein_coding
chr8	23246642	23261992	23246642	23261992	+	ENST00000517325.5@CHMP7	ENST00000517325.5	protein_coding	23246642,23249210,23255247,23256460,23258033,23258330,23258732,23259066,23260144,23260538	23246824,23249381,23255432,23256593,23258081,23258449,23258830,23259126,23260323,23261992	Gene ID= ENSG00000147457.13 TPM= 11.68 Transcript Type= nonsense_mediated_decay
chr8	23287908	23296279	23287908	23296279	+	ENST00000265806.10@R3HCC1	ENST00000265806.10	protein_coding	23287908,23288506,23289016,23289866,23291361,23293303,23294769,23295967	23288157,23288633,23289153,23290469,23291533,23293373,23294864,23296279	Gene ID= ENSG00000104679.10 TPM= 81.73 Transcript Type= protein_coding
chr8	23288087	23296279	23288087	23296279	+	transcript1135.chr8.nic@R3HCC1	transcript1135.chr8.nic	protein_coding	23288087,23288506,23289016,23289866,23291361,23293303,23294769	23288157,23288633,23289153,23290469,23291533,23293373,23296279	Gene ID= ENSG00000104679.10 TPM= 2.34 Transcript Type= NA
chr8	23297180	23404120	23297180	23404120	-	transcript1127.chr8.nnic@LOXL2	transcript1127.chr8.nnic	protein_coding	23403954,23367997,23360090,23340992,23333401,23328382,23322130,23319885,23316949,23309668,23303282,23302027,23297180	23404120,23368434,23360265,23341203,23333623,23328565,23322281,23320052,23317114,23309911,23303397,23302163,23298122	Gene ID= ENSG00000134013.15 TPM= 3.5 Transcript Type= NA
chr8	23336171	23341536	23336171	23341536	+	ENST00000517420.1@AC090197.1	ENST00000517420.1	processed_transcript	23336171,23341026	23337457,23341536	Gene ID= ENSG00000253837.1 TPM= 1.17 Transcript Type= retained_intron
chr8	23429152	23457695	23429152	23457695	-	ENST00000358689.8@ENTPD4	ENST00000358689.8	protein_coding	23457557,23449893,23448742,23447680,23444456,23443850,23442007,23441569,23439749,23436934,23435392,23434317,23429152	23457695,23449997,23448939,23447885,23444606,23443953,23442066,23441723,23439915,23437258,23435477,23434478,23433154	Gene ID= ENSG00000197217.12 TPM= 13.43 Transcript Type= protein_coding
chr8	23429152	23457695	23429152	23457695	-	transcript1142.chr8.nic@ENTPD4	transcript1142.chr8.nic	protein_coding	23457557,23449893,23448742,23447680,23444456,23443850,23442007,23441593,23439749,23436934,23435392,23434317,23429152	23457695,23449997,23448939,23447885,23444606,23443953,23442066,23441723,23439915,23437258,23435477,23434681,23433154	Gene ID= ENSG00000197217.12 TPM= 6.42 Transcript Type= NA
chr8	23528805	23575463	23528805	23575463	+	ENST00000519973.5@SLC25A37	ENST00000519973.5	protein_coding	23528805,23566108,23568322,23571335	23529212,23566336,23568378,23575463	Gene ID= ENSG00000147454.13 TPM= 10.51 Transcript Type= protein_coding
chr8	23528967	23572221	23528967	23572221	+	ENST00000518881.5@SLC25A37	ENST00000518881.5	protein_coding	23528967,23566108,23571335	23529212,23568378,23572221	Gene ID= ENSG00000147454.13 TPM= 2.34 Transcript Type= retained_intron
chr8	23567827	23573645	23567827	23573645	+	transcript1166.chr8.nic@SLC25A37	transcript1166.chr8.nic	protein_coding	23567827,23571335	23568378,23573645	Gene ID= ENSG00000147454.13 TPM= 21.02 Transcript Type= NA
chr8	23528956	23572203	23528956	23572203	+	ENST00000290075.10@SLC25A37	ENST00000290075.10	protein_coding	23528956,23566108,23568322,23571335	23529212,23566813,23568378,23572203	Gene ID= ENSG00000147454.13 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr8	23528975	23531925	23528975	23531925	+	ENST00000519192.1@SLC25A37	ENST00000519192.1	protein_coding	23528975,23531685	23529212,23531925	Gene ID= ENSG00000147454.13 TPM= 2.34 Transcript Type= processed_transcript
chr8	23841915	23854807	23841915	23854807	-	ENST00000290271.6@STC1	ENST00000290271.6	protein_coding	23854406,23852242,23851320,23841915	23854807,23852384,23851531,23845040	Gene ID= ENSG00000159167.11 TPM= 3.5 Transcript Type= protein_coding
chr8	24384285	24406013	24384285	24406013	+	ENST00000256412.8@ADAMDEC1	ENST00000256412.8	protein_coding	24384285,24392262,24393262,24394069,24395720,24397270,24397683,24398480,24398874,24399393,24400170,24401915,24404003,24405292	24384592,24392380,24393338,24394147,24395796,24397456,24397745,24398551,24399040,24399474,24400300,24402092,24404088,24406013	Gene ID= ENSG00000134028.14 TPM= 1.17 Transcript Type= protein_coding
chr8	24913012	24919093	24913012	24919093	+	ENST00000221166.9@NEFM	ENST00000221166.9	protein_coding	24913012,24915605,24917061	24914873,24915729,24919093	Gene ID= ENSG00000104722.13 TPM= 1.17 Transcript Type= protein_coding
chr8	25318593	25323136	25318593	25323136	+	transcript1176.chr8.nic@DOCK5	transcript1176.chr8.nic	protein_coding	25318593,25320980	25319676,25323136	Gene ID= ENSG00000147459.17 TPM= 2.34 Transcript Type= NA
chr8	25184772	25305307	25184772	25305307	+	ENST00000481100.5@DOCK5	ENST00000481100.5	protein_coding	25184772,25243674,25268845,25275386,25278569,25292024,25296513,25298944,25300576,25302325,25304255	25184951,25243757,25268885,25275441,25278665,25292172,25296648,25299101,25300657,25302454,25305307	Gene ID= ENSG00000147459.17 TPM= 1.17 Transcript Type= protein_coding
chr8	25186351	25190042	25186351	25190042	-	transcript1177.chr8.nnic@NA	transcript1177.chr8.nnic	NA	25186351	25190042	Gene ID= novel_gene_chr8_1178 TPM= 4.67 Transcript Type= NA
chr8	25428023	25458316	25428023	25458316	-	transcript1180.chr8.nic@KCTD9	transcript1180.chr8.nic	protein_coding	25458199,25450380,25446129,25444292,25440577,25439606,25439279,25436418,25436235,25435363,25433330,25432504,25428023	25458316,25450481,25446250,25444335,25440673,25439664,25439407,25436485,25436330,25435512,25433435,25432637,25429973	Gene ID= ENSG00000104756.15 TPM= 2.34 Transcript Type= NA
chr8	25427847	25458467	25427847	25458467	-	ENST00000221200.8@KCTD9	ENST00000221200.8	protein_coding	25458199,25446129,25444292,25440577,25439606,25439279,25436418,25436235,25435363,25433330,25432504,25427847	25458467,25446250,25444335,25440673,25439664,25439407,25436485,25436330,25435512,25433435,25432637,25429973	Gene ID= ENSG00000104756.15 TPM= 3.5 Transcript Type= protein_coding
chr8	26291491	26372680	26291491	26372680	+	ENST00000380737.7@PPP2R2A	ENST00000380737.7	protein_coding	26291491,26293666,26338890,26354468,26360169,26360974,26362684,26363721,26366315,26370134	26291826,26293740,26338987,26354633,26360281,26361151,26362848,26363890,26366406,26372680	Gene ID= ENSG00000221914.9 TPM= 7.01 Transcript Type= protein_coding
chr8	26347419	26350306	26347419	26350306	-	transcript1200.chr8.nnic@NA	transcript1200.chr8.nnic	NA	26347419	26350306	Gene ID= novel_gene_chr8_1201 TPM= 2.34 Transcript Type= NA
chr8	26379259	26382953	26379259	26382953	-	ENST00000519902.1@SDAD1P1	ENST00000519902.1	transcribed_processed_pseudogene	26382388,26379259	26382953,26381866	Gene ID= ENSG00000228451.3 TPM= 2.34 Transcript Type= processed_transcript
chr8	26382898	26413129	26382898	26413129	+	ENST00000380629.6@BNIP3L	ENST00000380629.6	protein_coding	26382898,26391243,26395230,26408000,26408227,26410364	26383230,26391426,26395302,26408103,26408376,26413129	Gene ID= ENSG00000104765.15 TPM= 408.66 Transcript Type= protein_coding
chr8	26504686	26514092	26504686	26514092	-	ENST00000522362.6@PNMA2	ENST00000522362.6	protein_coding	26513816,26509548,26504686	26514092,26509677,26509243	Gene ID= ENSG00000240694.8 TPM= 54.88 Transcript Type= protein_coding
chr8	26514022	26658173	26514022	26658173	+	ENST00000521913.6@DPYSL2	ENST00000521913.6	protein_coding	26514022,26581969,26583799,26624143,26626617,26627215,26627872,26634780,26643439,26643950,26647630,26652257,26653232,26655615	26514679,26582057,26583983,26624307,26626678,26627295,26627940,26634900,26643595,26644091,26647800,26652436,26653397,26658173	Gene ID= ENSG00000092964.17 TPM= 252.78 Transcript Type= protein_coding
chr8	26577843	26658178	26577843	26658178	+	ENST00000311151.9@DPYSL2	ENST00000311151.9	protein_coding	26577843,26581969,26583799,26624143,26626617,26627215,26627872,26634780,26643439,26643950,26647630,26652257,26653232,26655615	26578293,26582057,26583983,26624307,26626678,26627295,26627940,26634900,26643595,26644091,26647800,26652436,26653397,26658178	Gene ID= ENSG00000092964.17 TPM= 336.85 Transcript Type= protein_coding
chr8	26577960	26582260	26577960	26582260	-	transcript1223.chr8.nnic@NA	transcript1223.chr8.nnic	NA	26577960	26582260	Gene ID= novel_gene_chr8_1224 TPM= 4.67 Transcript Type= NA
chr8	26584615	26586506	26584615	26586506	-	transcript1227.chr8.nnic@NA	transcript1227.chr8.nnic	NA	26584615	26586506	Gene ID= novel_gene_chr8_1228 TPM= 19.85 Transcript Type= NA
chr8	26634430	26636719	26634430	26636719	-	transcript1225.chr8.nnic@NA	transcript1225.chr8.nnic	NA	26634430	26636719	Gene ID= novel_gene_chr8_1226 TPM= 22.18 Transcript Type= NA
chr8	26861304	26867278	26861304	26867278	-	transcript1230.chr8.nic@ADRA1A	transcript1230.chr8.nic	protein_coding	26866936,26861304	26867278,26865655	Gene ID= ENSG00000120907.17 TPM= 2.34 Transcript Type= NA
chr8	27284887	27311319	27284887	27311319	-	ENST00000305364.8@TRIM35	ENST00000305364.8	protein_coding	27310801,27298464,27294080,27290156,27289162,27284887	27311319,27298559,27294310,27290178,27289280,27288127	Gene ID= ENSG00000104228.12 TPM= 11.68 Transcript Type= protein_coding
chr8	27311482	27459390	27311482	27459390	+	ENST00000397501.5@PTK2B	ENST00000397501.5	protein_coding	27311482,27312304,27313205,27322402,27323267,27325564,27397548,27419895,27420657,27422304,27430093,27430364,27430876,27431398,27432260,27433435,27434093,27434513,27435743,27436251,27437122,27437396,27437765,27439031,27439309,27440237,27442875,27444206,27445794,27450749,27451043,27451485,27453114,27454154,27454531,27458294	27311709,27312387,27313287,27322499,27323426,27325681,27397788,27420073,27420744,27422383,27430155,27430418,27431016,27431472,27432361,27433552,27434132,27434559,27435793,27436348,27437206,27437496,27437880,27439131,27439398,27440441,27442983,27444271,27445919,27450895,27451078,27451509,27453160,27454291,27454611,27459390	Gene ID= ENSG00000120899.17 TPM= 28.22 Transcript Type= protein_coding
chr8	27325479	27459386	27325479	27459386	+	ENST00000346049.9@PTK2B	ENST00000346049.9	protein_coding	27325479,27397548,27419895,27420657,27422304,27430093,27430364,27430876,27431398,27432260,27433435,27434093,27434513,27435743,27436251,27437122,27437396,27437765,27439031,27439309,27440237,27442875,27444206,27445794,27450749,27451043,27451485,27453114,27454154,27454531,27458294	27325681,27397788,27420073,27420744,27422383,27430155,27430418,27431016,27431472,27432361,27433552,27434132,27434559,27435793,27436348,27437206,27437496,27437880,27439131,27439398,27440441,27442983,27444271,27445919,27450895,27451078,27451509,27453160,27454291,27454611,27459386	Gene ID= ENSG00000120899.17 TPM= 41.65 Transcript Type= protein_coding
chr8	27325564	27459391	27325564	27459391	+	ENST00000420218.3@PTK2B	ENST00000420218.3	protein_coding	27325564,27397548,27419895,27420657,27422304,27430093,27430364,27430876,27431398,27432260,27433435,27434093,27434513,27435743,27436251,27437122,27437396,27437765,27439031,27439309,27440237,27442875,27444206,27450749,27451043,27451485,27453114,27454154,27454531,27458294	27325681,27397788,27420073,27420744,27422383,27430155,27430418,27431016,27431472,27432361,27433552,27434132,27434559,27435793,27436348,27437206,27437496,27437880,27439131,27439398,27440441,27442983,27444271,27450895,27451078,27451509,27453160,27454291,27454611,27459391	Gene ID= ENSG00000120899.17 TPM= 35.61 Transcript Type= protein_coding
chr8	27490779	27545564	27490779	27545564	+	ENST00000521400.5@EPHX2	ENST00000521400.5	protein_coding	27490779,27500926,27503604,27504956,27506872,27511836,27515718,27516320,27518038,27520883,27522423,27525362,27536784,27538659,27540554,27541473,27543749,27544186,27544444	27491309,27501010,27503763,27505146,27506994,27511910,27515813,27516398,27518072,27520909,27522508,27525473,27536855,27538692,27540656,27541542,27543829,27544244,27545564	Gene ID= ENSG00000120915.13 TPM= 31.53 Transcript Type= protein_coding
chr8	27491166	27544913	27491166	27544913	+	ENST00000380476.7@EPHX2	ENST00000380476.7	protein_coding	27491166,27500964,27503604,27504956,27506872,27511836,27515718,27516320,27518038,27520883,27522423,27525362,27536784,27538659,27540554,27541473,27543749,27544186,27544444	27491309,27501010,27503763,27505146,27506994,27511910,27515813,27516398,27518072,27520909,27522508,27525473,27536855,27538692,27540656,27541542,27543829,27544244,27544913	Gene ID= ENSG00000120915.13 TPM= 1.17 Transcript Type= protein_coding
chr8	27596917	27615031	27596917	27615031	-	ENST00000316403.14@CLU	ENST00000316403.14	protein_coding	27614655,27610475,27608938,27606354,27604924,27604291,27599780,27598460,27596917	27615031,27610600,27609086,27606524,27605335,27604395,27600009,27598635,27598250	Gene ID= ENSG00000120885.21 TPM= 36.2 Transcript Type= protein_coding
chr8	27597808	27611431	27597808	27611431	-	ENST00000405140.7@CLU	ENST00000405140.7	protein_coding	27611146,27610475,27608938,27606354,27604924,27604291,27599780,27598460,27597808	27611431,27610600,27609086,27606524,27605335,27604395,27600009,27598635,27598250	Gene ID= ENSG00000120885.21 TPM= 6.42 Transcript Type= protein_coding
chr8	27633868	27676776	27633868	27676776	+	ENST00000337221.8@SCARA3	ENST00000337221.8	protein_coding	27633868,27649702,27651508,27656782,27658496,27676569	27634207,27649800,27651627,27656880,27659539,27676776	Gene ID= ENSG00000168077.13 TPM= 7.01 Transcript Type= protein_coding
chr8	27634181	27673020	27634181	27673020	+	ENST00000301904.3@SCARA3	ENST00000301904.3	protein_coding	27634181,27649702,27651508,27656782,27658496,27670900	27634207,27649800,27651627,27656880,27659539,27673020	Gene ID= ENSG00000168077.13 TPM= 7.01 Transcript Type= protein_coding
chr8	27733311	27772634	27733311	27772634	-	ENST00000356537.8@CCDC25	ENST00000356537.8	protein_coding	27772513,27765204,27762419,27756719,27752512,27748495,27748077,27740472,27733311	27772634,27765251,27762458,27756770,27752587,27748598,27748279,27740517,27736245	Gene ID= ENSG00000147419.17 TPM= 18.1 Transcript Type= protein_coding
chr8	27733318	27772653	27733318	27772653	-	ENST00000520486.5@CCDC25	ENST00000520486.5	protein_coding	27772513,27765204,27762419,27752512,27748495,27748077,27740472,27733318	27772653,27765251,27762458,27752587,27748598,27748279,27740517,27736245	Gene ID= ENSG00000147419.17 TPM= 4.09 Transcript Type= nonsense_mediated_decay
chr8	27735052	27772639	27735052	27772639	-	ENST00000520202.5@CCDC25	ENST00000520202.5	protein_coding	27772513,27765204,27762419,27752512,27748077,27740472,27735052	27772639,27765251,27762458,27752587,27748279,27740517,27736245	Gene ID= ENSG00000147419.17 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr8	27774386	27805316	27774386	27805316	+	ENST00000305188.12@ESCO2	ENST00000305188.12	protein_coding	27774386,27775499,27776362,27780174,27784000,27787885,27788847,27791963,27792668,27799541,27803306	27774607,27775567,27777169,27780267,27784057,27788002,27788978,27792052,27792811,27799716,27805316	Gene ID= ENSG00000171320.14 TPM= 1.17 Transcript Type= protein_coding
chr8	27869882	27992727	27869882	27992727	-	ENST00000354914.7@SCARA5	ENST00000354914.7	protein_coding	27992257,27987504,27966414,27921571,27909663,27907148,27904778,27879569,27869882	27992727,27987630,27966542,27922245,27909743,27907246,27904834,27879766,27872070	Gene ID= ENSG00000168079.16 TPM= 15.18 Transcript Type= protein_coding
chr8	27870236	27992292	27870236	27992292	-	transcript1286.chr8.nic@SCARA5	transcript1286.chr8.nic	protein_coding	27992257,27987504,27921571,27909663,27907148,27904778,27879569,27870236	27992292,27987630,27922245,27909743,27907246,27904834,27879766,27872070	Gene ID= ENSG00000168079.16 TPM= 2.34 Transcript Type= NA
chr8	28093124	28191153	28093124	28191153	+	transcript1289.chr8.nic@ELP3	transcript1289.chr8.nic	protein_coding	28093124,28097219,28099828,28106713,28107913,28110370,28113019,28129502,28132278,28137698,28155942,28158568,28160229,28161997,28183194,28189649	28093233,28097318,28099966,28106783,28107976,28110438,28113173,28129663,28132404,28137891,28156032,28158633,28160456,28162078,28183264,28191153	Gene ID= ENSG00000134014.16 TPM= 3.5 Transcript Type= NA
chr8	28092838	28191156	28092838	28191156	+	ENST00000256398.12@ELP3	ENST00000256398.12	protein_coding	28092838,28097219,28099828,28106713,28107913,28110370,28113019,28129502,28132278,28137698,28155942,28158568,28160229,28161997,28189649	28093233,28097318,28099966,28106783,28107976,28110438,28113173,28129663,28132404,28137891,28156032,28158633,28160456,28162078,28191156	Gene ID= ENSG00000134014.16 TPM= 35.03 Transcript Type= protein_coding
chr8	28348287	28386307	28348287	28386307	-	transcript1302.chr8.nic@ZNF395	transcript1302.chr8.nic	protein_coding	28386004,28360885,28359592,28356670,28353173,28352573,28351495,28350064,28349125,28348287	28386307,28361182,28359824,28356779,28353408,28352673,28351807,28350156,28349228,28348830	Gene ID= ENSG00000186918.13 TPM= 9.34 Transcript Type= NA
chr8	28345765	28347597	28345765	28347597	-	transcript1306.chr8.nnic@NA	transcript1306.chr8.nnic	NA	28345765	28347597	Gene ID= novel_gene_chr8_1307 TPM= 2.34 Transcript Type= NA
chr8	28494205	28574267	28494205	28574267	+	ENST00000537916.2@FZD3	ENST00000537916.2	protein_coding	28494205,28502670,28520638,28527147,28551603,28555738,28562798	28494343,28503202,28520834,28528164,28551751,28555971,28574267	Gene ID= ENSG00000104290.10 TPM= 1.17 Transcript Type= protein_coding
chr8	28494245	28527830	28494245	28527830	+	transcript1313.chr8.nic@FZD3	transcript1313.chr8.nic	protein_coding	28494245,28499933,28502670,28520638,28527147	28494343,28499978,28503202,28520834,28527830	Gene ID= ENSG00000104290.10 TPM= 2.34 Transcript Type= NA
chr8	28701327	28753687	28701327	28753687	+	ENST00000220562.8@EXTL3	ENST00000220562.8	protein_coding	28701327,28713457,28715585,28731223,28737519,28743086,28750657	28701659,28713550,28718207,28731350,28737663,28743214,28753687	Gene ID= ENSG00000012232.8 TPM= 24.52 Transcript Type= protein_coding
chr8	28767661	28890242	28767661	28890242	-	ENST00000416984.6@INTS9	ENST00000416984.6	protein_coding	28889874,28859436,28850213,28837637,28835292,28813492,28812327,28796544,28793807,28787829,28780823,28777829,28775759,28770982,28769889,28767661	28890242,28859563,28850273,28837776,28835378,28813612,28812461,28796655,28793987,28787889,28780994,28777953,28775926,28771080,28770026,28768322	Gene ID= ENSG00000104299.14 TPM= 7.59 Transcript Type= protein_coding
chr8	28767661	28889964	28767661	28889964	-	transcript1327.chr8.nic@INTS9	transcript1327.chr8.nic	protein_coding	28889874,28859436,28850213,28846747,28837637,28835292,28813492,28812327,28796544,28793807,28787829,28780823,28777829,28775759,28770982,28767661	28889964,28859563,28850273,28846809,28837776,28835378,28813612,28812461,28796655,28793987,28787889,28780994,28777953,28775926,28771080,28770026	Gene ID= ENSG00000104299.14 TPM= 2.34 Transcript Type= NA
chr8	28811129	28889947	28811129	28889947	-	transcript1329.chr8.nic@INTS9	transcript1329.chr8.nic	protein_coding	28889874,28859436,28850213,28846747,28837637,28835292,28811129	28889947,28859563,28850273,28846809,28837776,28835378,28813612	Gene ID= ENSG00000104299.14 TPM= 2.34 Transcript Type= NA
chr8	28767661	28889964	28767661	28889964	-	ENST00000521022.5@INTS9	ENST00000521022.5	protein_coding	28889874,28859436,28850213,28846747,28837637,28835292,28813492,28812327,28796544,28793807,28787829,28780823,28777829,28775759,28770982,28769889,28767661	28889964,28859563,28850273,28846809,28837776,28835378,28813612,28812461,28796655,28793987,28787889,28780994,28777953,28775926,28771080,28770026,28768322	Gene ID= ENSG00000104299.14 TPM= 40.28 Transcript Type= protein_coding
chr8	28890374	29051918	28890374	29051918	+	transcript1330.chr8.nnic@HMBOX1	transcript1330.chr8.nnic	protein_coding	28890374,28963811,28970043,28980071,29009072,29018760,29045361,29047358,29048954,29049290,29051018	28890678,28963890,28970519,28980156,29009182,29018913,29045443,29047453,29049048,29049394,29051918	Gene ID= ENSG00000147421.17 TPM= 2.34 Transcript Type= NA
chr8	28890374	29051917	28890374	29051917	+	transcript1333.chr8.nic@HMBOX1	transcript1333.chr8.nic	protein_coding	28890374,28963811,28970043,28980071,29009072,29018760,29045361,29047358,29048957,29051018	28890678,28963890,28970519,28980156,29009182,29018913,29045443,29047453,29049048,29051917	Gene ID= ENSG00000147421.17 TPM= 2.34 Transcript Type= NA
chr8	29055926	29059410	29055926	29059410	-	transcript1344.chr8.nnic@NA	transcript1344.chr8.nnic	NA	29055926	29059410	Gene ID= novel_gene_chr8_1345 TPM= 171.64 Transcript Type= NA
chr8	29058092	29064937	29058092	29064937	+	transcript1338.chr8.nnic@NA	transcript1338.chr8.nnic	NA	29058092	29064937	Gene ID= novel_gene_chr8_1339 TPM= 25.69 Transcript Type= NA
chr8	29148744	29263070	29148744	29263070	-	transcript1348.chr8.nic@KIF13B	transcript1348.chr8.nic	protein_coding	29262980,29245346,29196187,29190997,29188515,29186292,29181919,29180104,29177466,29176068,29167373,29165662,29160733,29155726,29150297,29148744	29263070,29245439,29196199,29191057,29188607,29186472,29182006,29180238,29177578,29176179,29167585,29165772,29160867,29155856,29150383,29148767	Gene ID= ENSG00000197892.12 TPM= 2.34 Transcript Type= NA
chr8	29067279	29263073	29067279	29263073	-	ENST00000524189.5@KIF13B	ENST00000524189.5	protein_coding	29262980,29245346,29196187,29190997,29188515,29186292,29181919,29180104,29177466,29176068,29167373,29165662,29160733,29155726,29150297,29148577,29147392,29146378,29142157,29140468,29140063,29134040,29132308,29130533,29127122,29126482,29124024,29123366,29122591,29118868,29116831,29113463,29109918,29109434,29108139,29099133,29092745,29075281,29071620,29067279	29263073,29245439,29196199,29191057,29188607,29186472,29182006,29180238,29177578,29176179,29167585,29165772,29160867,29155856,29150383,29148767,29147602,29146540,29142303,29140617,29140191,29134210,29132465,29130665,29127268,29126511,29124123,29123492,29122646,29118992,29117007,29113555,29110070,29109511,29108192,29099241,29092878,29075343,29072316,29070766	Gene ID= ENSG00000197892.12 TPM= 61.88 Transcript Type= protein_coding
chr8	30063012	30083208	30063012	30083208	-	ENST00000545648.2@SARAF	ENST00000545648.2	protein_coding	30082847,30069642,30066777,30065988,30063012	30083208,30070059,30066918,30066139,30063913	Gene ID= ENSG00000133872.13 TPM= 35.41 Transcript Type= protein_coding
chr8	30063098	30083124	30063098	30083124	-	ENST00000518174.5@SARAF	ENST00000518174.5	protein_coding	30082847,30073877,30069642,30066777,30065988,30063098	30083124,30074051,30070059,30066918,30066139,30063913	Gene ID= ENSG00000133872.13 TPM= 505.95 Transcript Type= nonsense_mediated_decay
chr8	30063126	30082948	30063126	30082948	-	ENST00000521265.5@SARAF	ENST00000521265.5	protein_coding	30082847,30073877,30069642,30066777,30066028,30063126	30082948,30074055,30070059,30066918,30066139,30063913	Gene ID= ENSG00000133872.13 TPM= 1.17 Transcript Type= protein_coding
chr8	30063130	30083153	30063130	30083153	-	ENST00000520303.5@SARAF	ENST00000520303.5	protein_coding	30082847,30069642,30066777,30065988,30063130	30083153,30070059,30066918,30066139,30063913	Gene ID= ENSG00000133872.13 TPM= 35.41 Transcript Type= nonsense_mediated_decay
chr8	30095398	30108524	30095398	30108524	+	ENST00000321250.12@LEPROTL1	ENST00000321250.12	protein_coding	30095398,30101898,30104300,30105746	30095528,30101973,30104486,30108524	Gene ID= ENSG00000104660.17 TPM= 17.51 Transcript Type= protein_coding
chr8	30156297	30183640	30156297	30183640	+	ENST00000221114.7@DCTN6	ENST00000221114.7	protein_coding	30156297,30164111,30175085,30177126,30179408,30180488,30183075	30156406,30164175,30175190,30177214,30179455,30180630,30183640	Gene ID= ENSG00000104671.7 TPM= 5.84 Transcript Type= protein_coding
chr8	30382119	30385401	30382119	30385401	-	ENST00000517521.5@RBPMS-AS1	ENST00000517521.5	antisense_RNA	30385144,30383544,30382119	30385401,30383697,30382615	Gene ID= ENSG00000254109.5 TPM= 3.5 Transcript Type= antisense_RNA
chr8	30349834	30385301	30349834	30385301	-	transcript1404.chr8.nnic@RBPMS-AS1	transcript1404.chr8.nnic	antisense_RNA	30385144,30349834	30385301,30351931	Gene ID= ENSG00000254109.5 TPM= 2.34 Transcript Type= NA
chr8	30351642	30385301	30351642	30385301	-	transcript1405.chr8.nnic@RBPMS-AS1	transcript1405.chr8.nnic	antisense_RNA	30385144,30351642	30385301,30351931	Gene ID= ENSG00000254109.5 TPM= 2.34 Transcript Type= NA
chr8	30384325	30547517	30384325	30547517	+	transcript1383.chr8.nic@RBPMS	transcript1383.chr8.nic	protein_coding	30384325,30474779,30477799,30479315,30504286,30544494,30545164,30547292	30385158,30474856,30477837,30479377,30504436,30544624,30545220,30547517	Gene ID= ENSG00000157110.15 TPM= 8.41 Transcript Type= NA
chr8	30384563	30506358	30384563	30506358	+	transcript1393.chr8.nic@RBPMS	transcript1393.chr8.nic	protein_coding	30384563,30474779,30477799,30479315,30504286	30385158,30474856,30477837,30479377,30506358	Gene ID= ENSG00000157110.15 TPM= 5.84 Transcript Type= NA
chr8	30384511	30547522	30384511	30547522	+	ENST00000339877.8@RBPMS	ENST00000339877.8	protein_coding	30384511,30474779,30477799,30479315,30504286,30544494,30547292	30385158,30474856,30477837,30479377,30504436,30544624,30547522	Gene ID= ENSG00000157110.15 TPM= 65.62 Transcript Type= protein_coding
chr8	30384479	30572261	30384479	30572261	+	ENST00000397323.8@RBPMS	ENST00000397323.8	protein_coding	30384479,30474779,30477799,30479315,30504286,30544494,30558887,30566257,30570637	30385158,30474856,30477837,30479377,30504436,30544624,30558956,30566360,30572261	Gene ID= ENSG00000157110.15 TPM= 45.77 Transcript Type= protein_coding
chr8	30385203	30547483	30385203	30547483	+	ENST00000520161.5@RBPMS	ENST00000520161.5	protein_coding	30385203,30474779,30477799,30479315,30504286,30544494,30547292	30385390,30474856,30477837,30479377,30504436,30544624,30547483	Gene ID= ENSG00000157110.15 TPM= 1.4 Transcript Type= protein_coding
chr8	30678061	30727926	30678061	30727926	-	ENST00000221130.9@GSR	ENST00000221130.9	protein_coding	30727530,30712062,30709814,30708072,30703093,30700081,30696380,30692969,30689161,30684088,30681930,30680904,30678061	30727926,30712088,30709902,30708141,30703240,30700135,30696479,30693055,30689319,30684199,30682061,30681037,30679669	Gene ID= ENSG00000104687.12 TPM= 165.8 Transcript Type= protein_coding
chr8	30682836	30684087	30682836	30684087	-	transcript1417.chr8.nnic@NA	transcript1417.chr8.nnic	NA	30682836	30684087	Gene ID= novel_gene_chr8_1418 TPM= 2.34 Transcript Type= NA
chr8	30744174	30767006	30744174	30767006	+	ENST00000380154.9@UBXN8	ENST00000380154.9	protein_coding	30744174,30751396,30753035,30754665,30756765,30760888,30763273,30766227	30744460,30751518,30753105,30754787,30756887,30760929,30763347,30767006	Gene ID= ENSG00000104691.14 TPM= 6.42 Transcript Type= nonsense_mediated_decay
chr8	30744165	30767006	30744165	30767006	+	ENST00000265616.9@UBXN8	ENST00000265616.9	protein_coding	30744165,30751396,30753035,30754665,30756765,30760888,30763273,30766227	30744277,30751518,30753105,30754787,30756887,30760929,30763347,30767006	Gene ID= ENSG00000104691.14 TPM= 13.43 Transcript Type= protein_coding
chr8	30785610	30812872	30785610	30812872	-	ENST00000221138.8@PPP2CB	ENST00000221138.8	protein_coding	30812320,30799546,30797581,30794192,30793917,30791197,30785610	30812872,30799755,30797754,30794281,30794078,30791315,30786307	Gene ID= ENSG00000104695.12 TPM= 117.93 Transcript Type= protein_coding
chr8	31033779	31173763	31033779	31173763	+	transcript1430.chr8.nnic@WRN	transcript1430.chr8.nnic	protein_coding	31033779,31058372,31059095,31064289,31064915,31067033,31068258,31076173,31080867,31083699,31085166,31087776,31088890,31090465,31090834,31091830,31096768,31100849,31111615,31116354,31120243,31124522,31124908,31132365,31141430,31141681,31142626,31143550,31147053,31147364,31150341,31154624,31157368,31167022,31172995	31033973,31058543,31059265,31064434,31065063,31067182,31068327,31076287,31081296,31083779,31085246,31087920,31088965,31090532,31090942,31091898,31096850,31100955,31111799,31116528,31120424,31124623,31125000,31132506,31141600,31141775,31142701,31143623,31147128,31147476,31150455,31154755,31157530,31167230,31173763	Gene ID= ENSG00000165392.9 TPM= 2.34 Transcript Type= NA
chr8	31033801	31173769	31033801	31173769	+	ENST00000298139.5@WRN	ENST00000298139.5	protein_coding	31033801,31058372,31059153,31064289,31064915,31067033,31068258,31076173,31080867,31083699,31085166,31087776,31088890,31090465,31090834,31091830,31096768,31100849,31111615,31116354,31120243,31124522,31124908,31132365,31141430,31141681,31142626,31143550,31147053,31147364,31150341,31154624,31157368,31167022,31172995	31033973,31058543,31059265,31064434,31065063,31067182,31068327,31076287,31081296,31083779,31085246,31087920,31088965,31090532,31090942,31091898,31096850,31100955,31111799,31116528,31120424,31124623,31125000,31132506,31141600,31141775,31142701,31143623,31147128,31147476,31150455,31154755,31157530,31167230,31173769	Gene ID= ENSG00000165392.9 TPM= 7.01 Transcript Type= protein_coding
chr8	32927968	33044611	32927968	33044611	+	transcript1446.chr8.nnic@AC090204.1	transcript1446.chr8.nnic	lincRNA	32927968,33041635,33044367	32928093,33041771,33044611	Gene ID= ENSG00000247134.6 TPM= 2.34 Transcript Type= NA
chr8	33498956	33513601	33498956	33513601	-	ENST00000431156.6@TTI2	ENST00000431156.6	protein_coding	33513082,33511967,33509746,33507229,33503748,33503429,33500328,33498956	33513601,33512712,33509932,33507321,33503935,33503572,33500490,33499277	Gene ID= ENSG00000129696.12 TPM= 3.5 Transcript Type= protein_coding
chr8	33498954	33513109	33498954	33513109	-	ENST00000360742.9@TTI2	ENST00000360742.9	protein_coding	33511967,33509746,33507229,33503748,33503429,33500328,33498954	33513109,33509932,33507321,33503935,33503572,33500490,33499277	Gene ID= ENSG00000129696.12 TPM= 8.17 Transcript Type= protein_coding
chr8	33498675	33500295	33498675	33500295	-	transcript1458.chr8.nnic@NA	transcript1458.chr8.nnic	NA	33498675	33500295	Gene ID= novel_gene_chr8_1459 TPM= 7.01 Transcript Type= NA
chr8	33513475	33513578	33513475	33513578	+	ENST00000459299.1@SNORD13	ENST00000459299.1	snoRNA	33513475	33513578	Gene ID= ENSG00000239039.1 TPM= 3.5 Transcript Type= snoRNA
chr8	33547755	33567125	33547755	33567125	-	ENST00000256257.1@RNF122	ENST00000256257.1	protein_coding	33566699,33558615,33551344,33551044,33549410,33547755	33567125,33558771,33551389,33551085,33549492,33548867	Gene ID= ENSG00000133874.1 TPM= 5.84 Transcript Type= protein_coding
chr8	33591332	33600106	33591332	33600106	-	ENST00000256261.8@DUSP26	ENST00000256261.8	protein_coding	33599665,33597295,33593533,33591332	33600106,33597591,33593747,33592212	Gene ID= ENSG00000133878.8 TPM= 7.01 Transcript Type= protein_coding
chr8	37695751	37700021	37695751	37700021	+	ENST00000331569.5@ZNF703	ENST00000331569.5	protein_coding	37695751,37697145	37696222,37700021	Gene ID= ENSG00000183779.6 TPM= 28.02 Transcript Type= protein_coding
chr8	37736599	37746522	37736599	37746522	+	ENST00000397228.6@ERLIN2	ENST00000397228.6	protein_coding	37736599,37737908,37740365,37741772,37744355,37744571,37745569	37736678,37738029,37740446,37741818,37744416,37744696,37746522	Gene ID= ENSG00000147475.14 TPM= 1.17 Transcript Type= protein_coding
chr8	37762593	37779767	37762593	37779767	+	ENST00000328195.7@PLPBP	ENST00000328195.7	protein_coding	37762593,37765526,37765711,37766280,37772755,37775339,37775918,37777973	37762758,37765633,37765746,37766355,37772889,37775481,37776016,37779767	Gene ID= ENSG00000147471.11 TPM= 93.41 Transcript Type= protein_coding
chr8	37858949	37899454	37858949	37899454	-	ENST00000330843.8@RAB11FIP1	ENST00000330843.8	protein_coding	37899071,37877109,37874515,37871278,37870420,37858949	37899454,37877551,37875322,37873179,37870528,37863113	Gene ID= ENSG00000156675.15 TPM= 121.43 Transcript Type= protein_coding
chr8	37962991	37966965	37962991	37966965	-	ENST00000345060.4@ADRB3	ENST00000345060.4	protein_coding	37965265,37962991	37966965,37964239	Gene ID= ENSG00000188778.5 TPM= 1.17 Transcript Type= protein_coding
chr8	38030341	38060365	38030341	38060365	+	ENST00000338825.4@EIF4EBP1	ENST00000338825.4	protein_coding	38030341,38057081,38059904	38030718,38057260,38060365	Gene ID= ENSG00000187840.4 TPM= 59.55 Transcript Type= protein_coding
chr8	38105242	38139965	38105242	38139965	+	ENST00000343823.10@ASH2L	ENST00000343823.10	protein_coding	38105242,38106378,38107021,38110379,38110739,38114192,38114905,38116650,38119270,38120932,38128291,38128758,38133454,38135668,38138816,38138964	38105738,38106444,38107166,38110467,38110833,38114287,38115000,38116725,38119363,38121149,38128458,38128951,38133546,38135766,38138875,38139965	Gene ID= ENSG00000129691.15 TPM= 1.17 Transcript Type= protein_coding
chr8	38105793	38139703	38105793	38139703	+	ENST00000428278.6@ASH2L	ENST00000428278.6	protein_coding	38105793,38106378,38107021,38110379,38110739,38114192,38114905,38116650,38119270,38120932,38128291,38128758,38133454,38135668,38138816,38138964	38106139,38106444,38107166,38110467,38110833,38114287,38115000,38116725,38119363,38121149,38128458,38128951,38133546,38135766,38138875,38139703	Gene ID= ENSG00000129691.15 TPM= 2.34 Transcript Type= protein_coding
chr8	38105527	38139703	38105527	38139703	+	transcript1504.chr8.nic@ASH2L	transcript1504.chr8.nic	protein_coding	38105527,38106378,38107021,38110379,38110739,38114192,38114905,38116650,38119270,38120932,38128291,38128758,38133454,38138816,38138964	38105738,38106444,38107166,38110467,38110833,38114287,38115000,38116725,38119363,38121149,38128458,38128951,38133546,38138875,38139703	Gene ID= ENSG00000129691.15 TPM= 2.34 Transcript Type= NA
chr8	38163321	38176716	38163321	38176716	-	ENST00000311351.8@LSM1	ENST00000311351.8	protein_coding	38176275,38171965,38169802,38163321	38176716,38172033,38169917,38163840	Gene ID= ENSG00000175324.9 TPM= 17.51 Transcript Type= protein_coding
chr8	38176599	38213301	38176599	38213301	+	ENST00000287322.4@BAG4	ENST00000287322.4	protein_coding	38176599,38192688,38207512,38209013,38210008	38177139,38192795,38207766,38209267,38213301	Gene ID= ENSG00000156735.10 TPM= 16.35 Transcript Type= protein_coding
chr8	38231343	38262833	38231343	38262833	+	ENST00000397166.6@DDHD2	ENST00000397166.6	protein_coding	38231343,38232987,38234394,38237538,38238089,38240275,38242250,38245742,38246233,38247713,38249708,38251912,38252132,38252722,38252957,38253556,38260040,38260600	38231859,38233214,38234584,38237627,38238209,38240364,38242385,38245950,38246300,38247835,38249803,38252028,38252287,38252824,38253127,38253718,38260147,38262833	Gene ID= ENSG00000085788.13 TPM= 9.92 Transcript Type= protein_coding
chr8	38231587	38260254	38231587	38260254	+	transcript1528.chr8.nic@DDHD2	transcript1528.chr8.nic	protein_coding	38231587,38232987,38234394,38237538,38238089,38240275,38242250,38245742,38246233,38247713,38249708,38251912,38252132,38252722,38252957,38253556,38260040	38231859,38233214,38234584,38237627,38238209,38240364,38242385,38245950,38246300,38247835,38249803,38252028,38252287,38252824,38253127,38253718,38260254	Gene ID= ENSG00000085788.13 TPM= 2.92 Transcript Type= NA
chr8	38263130	38269220	38263130	38269220	-	ENST00000424479.6@PLPP5	ENST00000424479.6	protein_coding	38269126,38268882,38268371,38267897,38267267,38266141,38263130	38269220,38268990,38268461,38267960,38267391,38266311,38264604	Gene ID= ENSG00000147535.16 TPM= 31.82 Transcript Type= protein_coding
chr8	38263138	38269232	38263138	38269232	-	transcript1550.chr8.nic@PLPP5	transcript1550.chr8.nic	protein_coding	38269126,38268882,38268371,38267897,38267267,38266141,38263138	38269232,38268990,38268461,38267960,38267391,38266311,38263406	Gene ID= ENSG00000147535.16 TPM= 4.67 Transcript Type= NA
chr8	38263130	38269232	38263130	38269232	-	transcript1556.chr8.nic@PLPP5	transcript1556.chr8.nic	protein_coding	38269126,38268371,38267897,38267267,38266141,38263130	38269232,38268990,38267960,38267391,38266311,38264604	Gene ID= ENSG00000147535.16 TPM= 2.63 Transcript Type= NA
chr8	38263130	38269232	38263130	38269232	-	transcript1564.chr8.nic@PLPP5	transcript1564.chr8.nic	protein_coding	38269126,38267897,38267267,38266141,38263130	38269232,38268990,38267391,38266311,38264604	Gene ID= ENSG00000147535.16 TPM= 4.96 Transcript Type= NA
chr8	38266980	38269243	38266980	38269243	-	ENST00000419686.2@PLPP5	ENST00000419686.2	protein_coding	38269126,38268882,38268371,38267897,38266980	38269243,38268990,38268461,38267960,38267391	Gene ID= ENSG00000147535.16 TPM= 3.5 Transcript Type= protein_coding
chr8	38266981	38269232	38266981	38269232	-	transcript1577.chr8.nic@PLPP5	transcript1577.chr8.nic	protein_coding	38269126,38266981	38269232,38268990	Gene ID= ENSG00000147535.16 TPM= 2.34 Transcript Type= NA
chr8	38263130	38269140	38263130	38269140	-	ENST00000529359.5@PLPP5	ENST00000529359.5	protein_coding	38268882,38268371,38267897,38267267,38266141,38263130	38269140,38268461,38267960,38267391,38266311,38264604	Gene ID= ENSG00000147535.16 TPM= 1.46 Transcript Type= protein_coding
chr8	38264739	38269207	38264739	38269207	-	ENST00000422581.6@PLPP5	ENST00000422581.6	protein_coding	38269126,38268882,38268371,38267897,38267267,38266141,38264739	38269207,38268990,38268461,38267960,38267391,38266311,38264949	Gene ID= ENSG00000147535.16 TPM= 4.67 Transcript Type= protein_coding
chr8	38267001	38269230	38267001	38269230	-	ENST00000528814.1@PLPP5	ENST00000528814.1	protein_coding	38269126,38267897,38267001	38269230,38268990,38267391	Gene ID= ENSG00000147535.16 TPM= 5.84 Transcript Type= retained_intron
chr8	38316798	38382991	38316798	38382991	-	transcript1535.chr8.nnic@NSD3	transcript1535.chr8.nnic	protein_coding	38381799,38348192,38347497,38338536,38337305,38331431,38329378,38326730,38321072,38318895,38316798	38382991,38348215,38348081,38338607,38337467,38331585,38329893,38326856,38321172,38318940,38318038	Gene ID= ENSG00000147548.16 TPM= 2.63 Transcript Type= NA
chr8	38319755	38382338	38319755	38382338	-	transcript1540.chr8.nic@NSD3	transcript1540.chr8.nic	protein_coding	38381799,38347497,38338536,38337305,38331431,38329378,38326730,38319755	38382338,38348215,38338607,38337467,38331585,38329893,38326856,38321172	Gene ID= ENSG00000147548.16 TPM= 6.91 Transcript Type= NA
chr8	38269697	38382272	38269697	38382272	-	ENST00000317025.12@NSD3	ENST00000317025.12	protein_coding	38381799,38347497,38338536,38337305,38331431,38329378,38326730,38321072,38318895,38315912,38315416,38314647,38305248,38304587,38299444,38295796,38290475,38289393,38288487,38281467,38279540,38278306,38276296,38269697	38382272,38348215,38338607,38337467,38331585,38329893,38326856,38321172,38318940,38316042,38315544,38314773,38305445,38304757,38299590,38295952,38290677,38289505,38288756,38281583,38279681,38278412,38276500,38275882	Gene ID= ENSG00000147548.16 TPM= 10.41 Transcript Type= protein_coding
chr8	38316417	38382272	38316417	38382272	-	ENST00000316985.7@NSD3	ENST00000316985.7	protein_coding	38381799,38347497,38338536,38337305,38331431,38329378,38326730,38321072,38318895,38316417	38382272,38348215,38338607,38337467,38331585,38329893,38326856,38321172,38318940,38318038	Gene ID= ENSG00000147548.16 TPM= 6.91 Transcript Type= protein_coding
chr8	38374866	38377009	38374866	38377009	+	transcript1578.chr8.nnic@NA	transcript1578.chr8.nnic	NA	38374866	38377009	Gene ID= novel_gene_chr8_1579 TPM= 2.34 Transcript Type= NA
chr8	38386303	38394434	38386303	38394434	+	ENST00000519476.6@LETM2	ENST00000519476.6	protein_coding	38386303,38387950,38392542	38386568,38388030,38394434	Gene ID= ENSG00000165046.12 TPM= 2.34 Transcript Type= protein_coding
chr8	38411139	38468834	38411139	38468834	-	ENST00000447712.6@FGFR1	ENST00000447712.6	protein_coding	38467981,38457356,38429682,38428346,38427921,38426122,38424509,38421797,38419533,38418228,38417870,38417306,38415870,38414779,38414559,38414152,38413918,38411139	38468834,38457534,38429948,38428435,38428093,38426245,38424699,38421941,38419735,38418373,38417991,38417416,38416060,38414901,38414629,38414289,38414023,38413804	Gene ID= ENSG00000077782.19 TPM= 1.17 Transcript Type= protein_coding
chr8	38411618	38467845	38411618	38467845	-	transcript1587.chr8.nnic@FGFR1	transcript1587.chr8.nnic	protein_coding	38467672,38457356,38428346,38427921,38426122,38424509,38421797,38419529,38418228,38417870,38417306,38415870,38414779,38414559,38414152,38413918,38411618	38467845,38457534,38428435,38428093,38426245,38424699,38421941,38419735,38418373,38417991,38417416,38416060,38414901,38414629,38414289,38414023,38412595	Gene ID= ENSG00000077782.19 TPM= 5.84 Transcript Type= NA
chr8	38412730	38468638	38412730	38468638	-	transcript1592.chr8.nnic@FGFR1	transcript1592.chr8.nnic	protein_coding	38467981,38457356,38428346,38427921,38426122,38424509,38421797,38419529,38418228,38417870,38417306,38415870,38414779,38414559,38414152,38413918,38412730	38468638,38457534,38428435,38428093,38426245,38424699,38421941,38419735,38418373,38417991,38417416,38416060,38414901,38414629,38414289,38414023,38413804	Gene ID= ENSG00000077782.19 TPM= 10.51 Transcript Type= NA
chr8	38412732	38468616	38412732	38468616	-	ENST00000326324.10@FGFR1	ENST00000326324.10	protein_coding	38467981,38457356,38428352,38427921,38426122,38424509,38421797,38419533,38418228,38417870,38417306,38415870,38414779,38414559,38414152,38413918,38412732	38468616,38457534,38428435,38428093,38426245,38424699,38421941,38419735,38418373,38417991,38417416,38416060,38414901,38414629,38414289,38414023,38413804	Gene ID= ENSG00000077782.19 TPM= 8.17 Transcript Type= protein_coding
chr8	38412730	38468616	38412730	38468616	-	ENST00000356207.9@FGFR1	ENST00000356207.9	protein_coding	38467981,38457356,38428346,38427921,38426122,38424509,38421797,38419533,38418228,38417870,38417306,38415870,38414779,38414559,38414152,38413918,38412730	38468616,38457534,38428435,38428093,38426245,38424699,38421941,38419735,38418373,38417991,38417416,38416060,38414901,38414629,38414289,38414023,38413804	Gene ID= ENSG00000077782.19 TPM= 9.34 Transcript Type= protein_coding
chr8	38728292	38850793	38728292	38850793	+	transcript1624.chr8.nic@TACC1	transcript1624.chr8.nic	protein_coding	38728292,38788704,38819522,38825308,38827168,38831125,38836162,38838470,38840224,38842287,38843289,38846699,38847955	38728671,38788819,38820635,38825368,38827288,38831177,38836287,38838546,38840267,38842447,38843395,38846819,38850793	Gene ID= ENSG00000147526.19 TPM= 49.1 Transcript Type= NA
chr8	38728190	38850793	38728190	38850793	+	ENST00000520615.5@TACC1	ENST00000520615.5	protein_coding	38728190,38788704,38819522,38825308,38827168,38831125,38836162,38838470,38840224,38842287,38843289,38846699,38847955	38728671,38788819,38820635,38825368,38827375,38831177,38836287,38838546,38840267,38842447,38843395,38846819,38850793	Gene ID= ENSG00000147526.19 TPM= 60.21 Transcript Type= protein_coding
chr8	38786829	38850793	38786829	38850793	+	transcript1631.chr8.nic@TACC1	transcript1631.chr8.nic	protein_coding	38786829,38788704,38819522,38825308,38827168,38831125,38836162,38838470,38840224,38842287,38843289,38846699,38847955	38787743,38788819,38820635,38825368,38827288,38831177,38836287,38838546,38840267,38842447,38843395,38846819,38850793	Gene ID= ENSG00000147526.19 TPM= 21.86 Transcript Type= NA
chr8	38728573	38732125	38728573	38732125	+	transcript1672.chr8.nnic@NA	transcript1672.chr8.nnic	NA	38728573	38732125	Gene ID= novel_gene_chr8_1673 TPM= 2.34 Transcript Type= NA
chr8	38778973	38782172	38778973	38782172	-	transcript1674.chr8.nnic@NA	transcript1674.chr8.nnic	NA	38778973	38782172	Gene ID= novel_gene_chr8_1675 TPM= 3.5 Transcript Type= NA
chr8	38901258	38940114	38901258	38940114	+	transcript1677.chr8.nic@PLEKHA2	transcript1677.chr8.nic	protein_coding	38901258,38917907,38935994	38901445,38918070,38940114	Gene ID= ENSG00000169499.14 TPM= 4.67 Transcript Type= NA
chr8	38901291	38973909	38901291	38973909	+	ENST00000617275.4@PLEKHA2	ENST00000617275.4	protein_coding	38901291,38917907,38935994,38943789,38946124,38950850,38952166,38952636,38953297,38957323,38968592,38969421	38901445,38918070,38936050,38943837,38946221,38950990,38952312,38952704,38953367,38957386,38968669,38973909	Gene ID= ENSG00000169499.14 TPM= 15.18 Transcript Type= protein_coding
chr8	38974164	38988662	38974164	38988662	+	ENST00000302495.4@HTRA4	ENST00000302495.4	protein_coding	38974164,38975031,38976535,38977953,38979215,38981653,38982498,38982953,38987936	38974729,38975130,38976739,38978147,38979247,38981767,38982555,38983048,38988662	Gene ID= ENSG00000169495.4 TPM= 2.34 Transcript Type= protein_coding
chr8	38988808	38996533	38988808	38996533	-	ENST00000456397.6@TM2D2	ENST00000456397.6	protein_coding	38996213,38995318,38993545,38988808	38996533,38995405,38993660,38991545	Gene ID= ENSG00000169490.16 TPM= 11.68 Transcript Type= protein_coding
chr8	38990805	38996509	38990805	38996509	-	ENST00000397070.6@TM2D2	ENST00000397070.6	protein_coding	38996213,38995318,38993545,38990805	38996509,38995794,38993660,38991545	Gene ID= ENSG00000169490.16 TPM= 4.67 Transcript Type= protein_coding
chr8	38996986	39105001	38996986	39105001	+	ENST00000487273.6@ADAM9	ENST00000487273.6	protein_coding	38996986,39007886,39011658,39013965,39016118,39017219,39018853,39021643,39023156,39025803,39026677,39041946,39054481,39055577,39071298,39077228,39082641,39082968,39090047,39091259,39101863,39103607	38997160,39007983,39011716,39014043,39016194,39017414,39018918,39021714,39023325,39025884,39026810,39042117,39054573,39055772,39071403,39077411,39082721,39083073,39090188,39091346,39101930,39105001	Gene ID= ENSG00000168615.11 TPM= 159.96 Transcript Type= protein_coding
chr8	39913284	39928431	39913284	39928431	+	ENST00000518237.5@IDO1	ENST00000518237.5	protein_coding	39913284,39917875,39918088,39918815,39920100,39922552,39923469,39924721,39925223,39927830	39914009,39917970,39918207,39918933,39920114,39922651,39923586,39924772,39925371,39928431	Gene ID= ENSG00000131203.12 TPM= 12.84 Transcript Type= protein_coding
chr8	40153455	40155308	40153455	40155308	+	ENST00000315792.4@C8orf4	ENST00000315792.4	protein_coding	40153455	40155308	Gene ID= ENSG00000176907.4 TPM= 3.5 Transcript Type= protein_coding
chr8	41261958	41309497	41261958	41309497	-	ENST00000220772.7@SFRP1	ENST00000220772.7	protein_coding	41308616,41303461,41261958	41309497,41303538,41265489	Gene ID= ENSG00000104332.11 TPM= 3.5 Transcript Type= protein_coding
chr8	41490482	41510980	41490482	41510980	+	ENST00000520817.5@GOLGA7	ENST00000520817.5	protein_coding	41490482,41490833,41497509,41505911,41507059,41509584	41490617,41490965,41497661,41506012,41507121,41510980	Gene ID= ENSG00000147533.16 TPM= 101 Transcript Type= protein_coding
chr8	41490654	41510980	41490654	41510980	+	ENST00000357743.8@GOLGA7	ENST00000357743.8	protein_coding	41490654,41497509,41505911,41507059,41509584	41490965,41497661,41506012,41507121,41510980	Gene ID= ENSG00000147533.16 TPM= 6.42 Transcript Type= protein_coding
chr8	41578200	41621914	41578200	41621914	+	transcript1723.chr8.nic@GPAT4	transcript1723.chr8.nic	protein_coding	41578200,41598292,41609416,41609655,41610599,41610736,41611903,41612180,41612845,41614386,41614963,41618684,41618898,41620893	41578278,41599304,41609485,41609955,41610621,41610810,41611992,41612273,41612960,41614441,41615048,41618812,41618977,41621914	Gene ID= ENSG00000158669.11 TPM= 9.34 Transcript Type= NA
chr8	41578191	41621914	41578191	41621914	+	transcript1732.chr8.nic@GPAT4	transcript1732.chr8.nic	protein_coding	41578191,41598292,41609416,41609655,41611903,41612180,41612845,41614386,41614963,41618684,41618898,41620893	41578278,41599304,41609485,41610810,41611992,41612273,41612960,41614441,41615048,41618812,41618977,41621914	Gene ID= ENSG00000158669.11 TPM= 11.68 Transcript Type= NA
chr8	41957556	41959178	41957556	41959178	+	transcript1739.chr8.nnic@NA	transcript1739.chr8.nnic	NA	41957556	41959178	Gene ID= novel_gene_chr8_1740 TPM= 4.67 Transcript Type= NA
chr8	42153011	42171182	42153011	42171182	+	ENST00000396926.7@AP3M2	ENST00000396926.7	protein_coding	42153011,42154616,42157941,42162281,42165071,42165427,42167164,42167666,42168961	42153105,42154960,42158112,42162418,42165156,42165560,42167371,42167810,42171182	Gene ID= ENSG00000070718.11 TPM= 35.03 Transcript Type= protein_coding
chr8	42175233	42207724	42175233	42207724	-	ENST00000220809.8@PLAT	ENST00000220809.8	protein_coding	42207494,42193114,42191372,42188934,42187906,42187398,42185081,42182719,42181937,42180490,42180242,42179926,42178897,42175233	42207724,42193211,42191414,42189071,42188016,42187572,42185172,42182890,42182022,42180685,42180378,42180066,42179063,42176151	Gene ID= ENSG00000104368.17 TPM= 127.27 Transcript Type= protein_coding
chr8	42271302	42331608	42271302	42331608	+	ENST00000520810.5@IKBKB	ENST00000520810.5	protein_coding	42271302,42272083,42288634,42290156,42293443,42305187,42306343,42308901,42314322,42316210,42316710,42317657,42318552,42319270,42319585,42320735,42321896,42322054,42322347,42325970,42329124,42330914	42271469,42272205,42288728,42290273,42293512,42305275,42306432,42309025,42314429,42316339,42316904,42317771,42318675,42319421,42319646,42320844,42321945,42322153,42322494,42326097,42329214,42331608	Gene ID= ENSG00000104365.13 TPM= 10.12 Transcript Type= protein_coding
chr8	42271302	42329314	42271302	42329314	+	transcript1770.chr8.nic@IKBKB	transcript1770.chr8.nic	protein_coding	42271302,42272083,42288634,42290156,42293443,42305187,42306343,42308901,42314322,42316210,42316710,42317657,42318552,42319270,42319585,42320735,42321896,42322054,42322347,42325970,42329124	42271469,42272205,42288728,42290273,42293512,42305275,42306432,42309025,42314429,42316339,42316904,42317771,42318675,42319421,42319646,42320844,42321945,42322153,42322494,42326097,42329314	Gene ID= ENSG00000104365.13 TPM= 6.62 Transcript Type= NA
chr8	42271302	42332653	42271302	42332653	+	ENST00000416505.5@IKBKB	ENST00000416505.5	protein_coding	42271302,42272083,42290156,42293443,42305187,42306343,42308901,42314322,42316210,42316710,42317657,42318552,42319270,42319585,42320735,42321896,42322054,42322347,42325970,42329124,42330914	42271469,42272205,42290273,42293512,42305275,42306432,42309025,42314429,42316339,42316904,42317771,42318675,42319421,42319646,42320844,42321945,42322153,42322494,42326097,42329214,42332653	Gene ID= ENSG00000104365.13 TPM= 1.95 Transcript Type= protein_coding
chr8	42271302	42331909	42271302	42331909	+	transcript1791.chr8.nic@IKBKB	transcript1791.chr8.nic	protein_coding	42271302,42272083,42288634,42290156,42293443,42305187,42306343,42308901,42314322,42316210,42316710,42317657,42318552,42319270,42321896,42322054,42325970,42329124,42330914	42271469,42272205,42288728,42290273,42293512,42305275,42306432,42309025,42314429,42316339,42316904,42317771,42318675,42320844,42321945,42322494,42326097,42329214,42331909	Gene ID= ENSG00000104365.13 TPM= 3.7 Transcript Type= NA
chr8	42271302	42331909	42271302	42331909	+	transcript1799.chr8.nic@IKBKB	transcript1799.chr8.nic	protein_coding	42271302,42272083,42290156,42293443,42305187,42306343,42308901,42314322,42316210,42316710,42317657,42318552,42321896,42322054,42322347,42325970,42329124,42330914	42271469,42272205,42290273,42293512,42305275,42306432,42309025,42314429,42316339,42316904,42317771,42320844,42321945,42322153,42322494,42326097,42329214,42331909	Gene ID= ENSG00000104365.13 TPM= 4.29 Transcript Type= NA
chr8	42338455	42371808	42338455	42371808	+	ENST00000265421.8@POLB	ENST00000265421.8	protein_coding	42338455,42339012,42344953,42349016,42350007,42352519,42355516,42357169,42357320,42361295,42362612,42369271,42369849,42371563	42338685,42339069,42345019,42349090,42350065,42352568,42355567,42357223,42357392,42361365,42362698,42369335,42369988,42371808	Gene ID= ENSG00000070501.11 TPM= 6.42 Transcript Type= protein_coding
chr8	42338480	42371808	42338480	42371808	+	transcript1811.chr8.nic@POLB	transcript1811.chr8.nic	protein_coding	42338480,42344953,42349016,42350007,42352519,42355516,42357169,42357320,42361295,42362612,42369271,42369849,42371563	42338685,42345019,42349090,42350065,42352568,42355567,42357223,42357392,42361365,42362698,42369335,42369988,42371808	Gene ID= ENSG00000070501.11 TPM= 2.92 Transcript Type= NA
chr8	42391822	42405897	42391822	42405897	+	transcript1816.chr8.nic@VDAC3	transcript1816.chr8.nic	protein_coding	42391822,42393845,42394210,42395084,42398712,42399651,42401788,42404867,42405371	42391928,42393884,42394278,42395133,42398864,42399703,42403461,42404924,42405897	Gene ID= ENSG00000078668.13 TPM= 11.68 Transcript Type= NA
chr8	42391903	42405897	42391903	42405897	+	ENST00000022615.8@VDAC3	ENST00000022615.8	protein_coding	42391903,42393845,42394210,42395084,42398712,42399651,42401788,42403311,42404867,42405371	42391928,42393884,42394278,42395133,42398864,42399703,42402015,42403461,42404924,42405897	Gene ID= ENSG00000078668.13 TPM= 93.41 Transcript Type= protein_coding
chr8	42416475	42542193	42416475	42542193	-	transcript1820.chr8.nnic@SLC20A2	transcript1820.chr8.nnic	protein_coding	42541860,42472102,42471067,42465777,42463005,42459896,42444646,42439450,42436989,42430064,42428758,42416475	42542193,42472654,42471201,42465917,42463090,42459992,42444762,42439653,42437577,42430249,42428842,42417967	Gene ID= ENSG00000168575.9 TPM= 5.45 Transcript Type= NA
chr8	42416475	42542196	42416475	42542196	-	transcript1823.chr8.nnic@SLC20A2	transcript1823.chr8.nnic	protein_coding	42541538,42472102,42465777,42463005,42459896,42444646,42439450,42436989,42430064,42428758,42416475	42542196,42472654,42465917,42463090,42459992,42444762,42439653,42437577,42430249,42428842,42417967	Gene ID= ENSG00000168575.9 TPM= 39.9 Transcript Type= NA
chr8	42416475	42542119	42416475	42542119	-	transcript1824.chr8.nnic@SLC20A2	transcript1824.chr8.nnic	protein_coding	42541860,42472102,42465777,42463005,42459896,42444646,42439450,42436989,42430064,42428758,42416475	42542119,42472654,42465917,42463090,42459992,42444762,42439653,42437577,42430249,42428842,42417967	Gene ID= ENSG00000168575.9 TPM= 11.29 Transcript Type= NA
chr8	42417464	42501460	42417464	42501460	-	ENST00000520262.5@SLC20A2	ENST00000520262.5	protein_coding	42501031,42472102,42465777,42463005,42459896,42444646,42439450,42436989,42430064,42428758,42417464	42501460,42472654,42465917,42463090,42459992,42444762,42439653,42437577,42430249,42428842,42417967	Gene ID= ENSG00000168575.9 TPM= 1.17 Transcript Type= protein_coding
chr8	42417564	42541563	42417564	42541563	-	transcript1827.chr8.nnic@SLC20A2	transcript1827.chr8.nnic	protein_coding	42540915,42472102,42465777,42463005,42459896,42444646,42439450,42436989,42430064,42428758,42417564	42541563,42472654,42465917,42463090,42459992,42444762,42439653,42437577,42430249,42428842,42417967	Gene ID= ENSG00000168575.9 TPM= 4.29 Transcript Type= NA
chr8	42533655	42541576	42533655	42541576	-	transcript1839.chr8.nic@SLC20A2	transcript1839.chr8.nic	protein_coding	42540915,42536355,42533655	42541576,42536471,42535335	Gene ID= ENSG00000168575.9 TPM= 6.04 Transcript Type= NA
chr8	42533655	42541758	42533655	42541758	-	transcript1845.chr8.nic@SLC20A2	transcript1845.chr8.nic	protein_coding	42541538,42533655	42541758,42535335	Gene ID= ENSG00000168575.9 TPM= 2.92 Transcript Type= NA
chr8	42529354	42534012	42529354	42534012	-	transcript1853.chr8.nnic@NA	transcript1853.chr8.nnic	NA	42529354	42534012	Gene ID= novel_gene_chr8_1854 TPM= 10.51 Transcript Type= NA
chr8	42539329	42541532	42539329	42541532	+	transcript1849.chr8.nnic@NA	transcript1849.chr8.nnic	NA	42539329	42541532	Gene ID= novel_gene_chr8_1850 TPM= 25.3 Transcript Type= NA
chr8	42541613	42552980	42541613	42552980	+	ENST00000414154.6@SMIM19	ENST00000414154.6	protein_coding	42541613,42546469,42548656,42552544	42541705,42546606,42548780,42552980	Gene ID= ENSG00000176209.11 TPM= 11.68 Transcript Type= protein_coding
chr8	42541608	42552980	42541608	42552980	+	ENST00000417410.6@SMIM19	ENST00000417410.6	protein_coding	42541608,42546469,42548656,42552544	42542373,42546606,42548780,42552980	Gene ID= ENSG00000176209.11 TPM= 9.34 Transcript Type= protein_coding
chr8	42836676	42843305	42836676	42843305	-	ENST00000345117.2@THAP1	ENST00000345117.2	protein_coding	42843024,42836676	42843305,42838336	Gene ID= ENSG00000131931.8 TPM= 1.17 Transcript Type= protein_coding
chr8	42836674	42843325	42836674	42843325	-	ENST00000254250.7@THAP1	ENST00000254250.7	protein_coding	42843024,42839186,42836674	42843325,42839381,42838336	Gene ID= ENSG00000131931.8 TPM= 22.18 Transcript Type= protein_coding
chr8	42855248	42896617	42855248	42896617	-	transcript1871.chr8.nnic@RNF170	transcript1871.chr8.nnic	protein_coding	42896484,42887728,42873931,42870004,42865416,42864617,42861745,42855248	42896617,42887871,42874006,42870112,42865489,42864693,42861855,42856428	Gene ID= ENSG00000120925.15 TPM= 2.34 Transcript Type= NA
chr8	42853297	42896723	42853297	42896723	-	ENST00000534961.5@RNF170	ENST00000534961.5	protein_coding	42896254,42887728,42873931,42870004,42865416,42861745,42853297	42896723,42887871,42874006,42870112,42865489,42861855,42856428	Gene ID= ENSG00000120925.15 TPM= 3.5 Transcript Type= protein_coding
chr8	42855709	42896588	42855709	42896588	-	ENST00000319073.5@RNF170	ENST00000319073.5	protein_coding	42896484,42887728,42873931,42870004,42861745,42855709	42896588,42887871,42874006,42870112,42861855,42856428	Gene ID= ENSG00000120925.15 TPM= 1.17 Transcript Type= protein_coding
chr8	42853301	42896721	42853301	42896721	-	ENST00000527424.5@RNF170	ENST00000527424.5	protein_coding	42896484,42887728,42873931,42870004,42865416,42861745,42853301	42896721,42887871,42874006,42870112,42865489,42861855,42856428	Gene ID= ENSG00000120925.15 TPM= 8.17 Transcript Type= protein_coding
chr8	42896741	43022105	42896741	43022105	+	transcript1860.chr8.nnic@HOOK3	transcript1860.chr8.nnic	protein_coding	42896741,42906173,42925557,42930122,42943313,42950388,42957094,42959231,42964311,42966473,42968013,42973289,42974107,42982627,42986655,42997550,43002107,43007847,43010305,43013051,43013329,43018358,43021862	42897188,42906258,42925629,42930172,42943445,42950455,42957156,42959314,42964474,42966613,42968214,42973399,42974194,42982696,42986795,42997637,43002141,43007929,43010405,43013155,43013400,43020487,43022105	Gene ID= ENSG00000168172.8 TPM= 3.5 Transcript Type= NA
chr8	42896940	42907839	42896940	42907839	+	transcript1893.chr8.nic@HOOK3	transcript1893.chr8.nic	protein_coding	42896940,42906173	42897188,42907839	Gene ID= ENSG00000168172.8 TPM= 2.34 Transcript Type= NA
chr8	43007017	43013052	43007017	43013052	+	transcript1897.chr8.nic@HOOK3	transcript1897.chr8.nic	protein_coding	43007017,43010305	43007929,43013052	Gene ID= ENSG00000168172.8 TPM= 2.34 Transcript Type= NA
chr8	42896932	43030539	42896932	43030539	+	ENST00000307602.8@HOOK3	ENST00000307602.8	protein_coding	42896932,42906173,42925557,42930122,42943313,42950388,42957094,42959231,42964311,42966473,42968013,42973289,42974107,42982627,42986655,42997550,43002107,43007847,43010305,43013051,43013329,43018358	42897188,42906258,42925629,42930172,42943445,42950455,42957156,42959314,42964474,42966613,42968214,42973399,42974194,42982696,42986795,42997637,43002141,43007929,43010405,43013155,43013400,43030539	Gene ID= ENSG00000168172.8 TPM= 22.18 Transcript Type= protein_coding
chr8	43056153	43085788	43056153	43085788	+	ENST00000302279.7@FNTA	ENST00000302279.7	protein_coding	43056153,43059092,43064101,43069555,43072181,43077216,43083118,43084710,43085160	43056546,43059177,43064215,43069659,43072307,43077364,43083180,43084881,43085788	Gene ID= ENSG00000168522.12 TPM= 87.57 Transcript Type= protein_coding
chr8	43056299	43085788	43056299	43085788	+	transcript1902.chr8.nic@FNTA	transcript1902.chr8.nic	protein_coding	43056299,43059092,43064101,43069555,43072181,43077216,43083118,43084710,43085160	43056546,43059177,43064215,43069659,43072307,43080441,43083180,43084881,43085788	Gene ID= ENSG00000168522.12 TPM= 8.17 Transcript Type= NA
chr8	43056308	43085788	43056308	43085788	+	transcript1903.chr8.nnic@FNTA	transcript1903.chr8.nnic	protein_coding	43056308,43064101,43069555,43072181,43077216,43080278,43083118,43084351,43085160	43056546,43064215,43069659,43072307,43077364,43080441,43083927,43084881,43085788	Gene ID= ENSG00000168522.12 TPM= 2.34 Transcript Type= NA
chr8	43127750	43131171	43127750	43131171	+	transcript1913.chr8.nnic@NA	transcript1913.chr8.nnic	NA	43127750	43131171	Gene ID= novel_gene_chr8_1914 TPM= 5.84 Transcript Type= NA
chr8	43140478	43201827	43140478	43201827	+	transcript1920.chr8.nnic@HGSNAT	transcript1920.chr8.nnic	protein_coding	43140478,43146948,43158575,43158923,43161438,43169173,43170585,43172310,43178074,43182145,43191474,43192304,43193757,43196948,43197672,43197840,43199388	43140614,43147063,43158711,43159044,43161507,43169242,43170694,43172386,43178234,43182260,43191595,43192430,43193843,43197025,43197742,43197952,43201827	Gene ID= ENSG00000165102.14 TPM= 3.5 Transcript Type= NA
chr8	43140379	43174238	43140379	43174238	+	transcript1924.chr8.nnic@HGSNAT	transcript1924.chr8.nnic	protein_coding	43140379,43146948,43158575,43158923,43161438,43169173,43170585,43172310,43173006,43173713	43140614,43147063,43158711,43159044,43161507,43169242,43170694,43172386,43173127,43174238	Gene ID= ENSG00000165102.14 TPM= 2.34 Transcript Type= NA
chr8	43140440	43174232	43140440	43174232	+	transcript1925.chr8.nic@HGSNAT	transcript1925.chr8.nic	protein_coding	43140440,43146948,43158575,43158923,43161438,43169173,43170585,43172310,43173713	43140614,43147063,43158711,43159044,43161507,43169242,43170694,43172386,43174232	Gene ID= ENSG00000165102.14 TPM= 3.5 Transcript Type= NA
chr8	43140455	43202855	43140455	43202855	+	ENST00000379644.8@HGSNAT	ENST00000379644.8	protein_coding	43140455,43146948,43158575,43158923,43161438,43169173,43170585,43172310,43173713,43178074,43182145,43191474,43192304,43193757,43196948,43197672,43197840,43199388	43140614,43147063,43158711,43159044,43161507,43169242,43170694,43172386,43173743,43178234,43182260,43191595,43192430,43193843,43197025,43197742,43197952,43202855	Gene ID= ENSG00000165102.14 TPM= 9.34 Transcript Type= protein_coding
chr8	47260938	47735913	47260938	47735913	+	transcript1935.chr8.nnic@SPIDR	transcript1935.chr8.nnic	protein_coding	47260938,47279862,47284028,47291033,47293867,47388341,47396376,47407861,47440323,47595811,47598946,47673801,47700403,47701721,47701956,47712662,47713489,47727200,47728933,47729412,47735307	47260991,47280017,47284094,47291137,47294030,47388533,47396626,47407961,47440542,47596006,47599196,47673941,47700490,47701864,47702015,47712872,47713641,47727293,47729047,47729465,47735913	Gene ID= ENSG00000164808.16 TPM= 9.92 Transcript Type= NA
chr8	47260514	47735913	47260514	47735913	+	transcript1944.chr8.nnic@SPIDR	transcript1944.chr8.nnic	protein_coding	47260514,47279862,47284028,47291033,47293867,47396376,47407861,47440323,47595811,47598946,47673801,47700403,47701721,47701956,47712662,47713489,47728933,47729412,47735307	47260991,47280017,47284094,47291137,47294030,47396626,47407961,47440542,47596006,47599196,47673941,47700490,47701864,47702015,47712872,47713641,47729047,47729465,47735913	Gene ID= ENSG00000164808.16 TPM= 5.25 Transcript Type= NA
chr8	47260514	47735913	47260514	47735913	+	transcript1945.chr8.nic@SPIDR	transcript1945.chr8.nic	protein_coding	47260514,47279862,47284028,47291033,47293867,47396376,47407861,47440323,47595811,47598946,47673801,47700403,47701721,47701956,47712662,47727200,47728933,47729412,47735307	47260991,47280017,47284094,47291137,47294030,47396626,47407961,47440542,47596006,47599196,47673941,47700490,47701864,47702015,47713641,47727293,47729047,47729465,47735913	Gene ID= ENSG00000164808.16 TPM= 14.01 Transcript Type= NA
chr8	47735634	47738163	47735634	47738163	-	transcript1960.chr8.nnic@CEBPD	transcript1960.chr8.nnic	protein_coding	47737053,47735634	47738163,47736891	Gene ID= ENSG00000221869.4 TPM= 7.59 Transcript Type= NA
chr8	47735635	47738426	47735635	47738426	-	transcript1961.chr8.nnic@NA	transcript1961.chr8.nnic	NA	47735635	47738426	Gene ID= novel_gene_chr8_1962 TPM= 113.84 Transcript Type= NA
chr8	47773108	47785736	47773108	47785736	-	transcript1968.chr8.nic@PRKDC	transcript1968.chr8.nic	protein_coding	47785113,47783742,47782378,47782162,47779004,47778728,47778459,47777686,47776844,47773108	47785736,47783809,47782598,47782254,47779093,47778799,47778660,47777874,47776983,47774377	Gene ID= ENSG00000253729.7 TPM= 9.34 Transcript Type= NA
chr8	47960898	47978160	47960898	47978160	+	ENST00000523944.5@MCM4	ENST00000523944.5	protein_coding	47960898,47961131,47961516,47962053,47962305,47962764,47962945,47964574,47966187,47967365,47969798,47970511,47971341,47972857,47974734,47975715,47976686	47961014,47961214,47961680,47962216,47962406,47962859,47963040,47964712,47966407,47967485,47970057,47970876,47971468,47973064,47974962,47975848,47978160	Gene ID= ENSG00000104738.16 TPM= 4.67 Transcript Type= protein_coding
chr8	48008400	48064708	48008400	48064708	+	ENST00000523111.6@UBE2V2	ENST00000523111.6	protein_coding	48008400,48043033,48049853,48060682	48008470,48043181,48049978,48064708	Gene ID= ENSG00000169139.11 TPM= 77.06 Transcript Type= protein_coding
chr8	48917768	48921429	48917768	48921429	-	ENST00000020945.3@SNAI2	ENST00000020945.3	protein_coding	48921187,48919896,48917768	48921429,48920441,48918988	Gene ID= ENSG00000019549.9 TPM= 26.85 Transcript Type= protein_coding
chr8	51319579	51809445	51319579	51809445	-	ENST00000356297.4@PXDNL	ENST00000356297.4	protein_coding	51809181,51654689,51592627,51556840,51499699,51483643,51474972,51472187,51457498,51453519,51449002,51447004,51426646,51423575,51413150,51411250,51408067,51374597,51371873,51345833,51339624,51320784,51319579	51809445,51654760,51592698,51556911,51499770,51483714,51475141,51472304,51457667,51453785,51449118,51447162,51426758,51423731,51413258,51411407,51409561,51374731,51372081,51345947,51339753,51320897,51320022	Gene ID= ENSG00000147485.12 TPM= 2.34 Transcript Type= protein_coding
chr8	51815290	51818424	51815290	51818424	+	transcript2012.chr8.nnic@NA	transcript2012.chr8.nnic	NA	51815290	51818424	Gene ID= novel_gene_chr8_2013 TPM= 10.51 Transcript Type= NA
chr8	51817580	51899134	51817580	51899134	-	transcript2002.chr8.nic@PCMTD1	transcript2002.chr8.nic	protein_coding	51898930,51845661,51833518,51831444,51817580	51899134,51845763,51833689,51831567,51820718	Gene ID= ENSG00000168300.13 TPM= 7.01 Transcript Type= NA
chr8	51850697	51854890	51850697	51854890	+	transcript2010.chr8.nnic@NA	transcript2010.chr8.nnic	NA	51850697	51854890	Gene ID= novel_gene_chr8_2011 TPM= 5.84 Transcript Type= NA
chr8	52645755	52714511	52645755	52714511	-	transcript2035.chr8.nic@RB1CC1	transcript2035.chr8.nic	protein_coding	52714075,52686853,52685399,52683887,52683549,52676369,52673845,52668021,52661535,52661095,52660926,52660596,52658873,52657998,52656008,52645755	52714511,52686967,52685520,52684013,52683719,52676571,52674274,52668191,52661719,52661281,52661007,52660657,52658976,52658124,52657908,52645867	Gene ID= ENSG00000023287.12 TPM= 2.34 Transcript Type= NA
chr8	52622459	52714423	52622459	52714423	-	ENST00000435644.6@RB1CC1	ENST00000435644.6	protein_coding	52714075,52686853,52685399,52683887,52683549,52676369,52673845,52668021,52661535,52661095,52660926,52660596,52658873,52657998,52656008,52645702,52642704,52642351,52636015,52634921,52630470,52628041,52624717,52622459	52714423,52686967,52685520,52684013,52683719,52676571,52674274,52668191,52661719,52661281,52661007,52660657,52658976,52658124,52657908,52645867,52642812,52642591,52636069,52634968,52630528,52628168,52624787,52623859	Gene ID= ENSG00000023287.12 TPM= 5.84 Transcript Type= protein_coding
chr8	52622456	52714432	52622456	52714432	-	ENST00000025008.9@RB1CC1	ENST00000025008.9	protein_coding	52714075,52686853,52685399,52683887,52683549,52676369,52673845,52668021,52661535,52661095,52660926,52660596,52658873,52657998,52656008,52645702,52642704,52642351,52636015,52634921,52630470,52628032,52624717,52622456	52714432,52686967,52685520,52684013,52683719,52676571,52674274,52668191,52661719,52661281,52661007,52660657,52658976,52658124,52657908,52645867,52642812,52642591,52636069,52634968,52630528,52628168,52624787,52623859	Gene ID= ENSG00000023287.12 TPM= 5.84 Transcript Type= protein_coding
chr8	53715557	53843558	53715557	53843558	-	ENST00000355221.7@ATP6V1H	ENST00000355221.7	protein_coding	53843034,53841578,53832984,53829444,53817417,53814662,53801799,53795647,53771989,53769618,53756555,53743577,53715557	53843558,53841725,53833086,53829533,53817530,53814766,53801896,53795839,53772167,53769743,53756656,53743690,53716024	Gene ID= ENSG00000047249.17 TPM= 5.84 Transcript Type= protein_coding
chr8	53715673	53843262	53715673	53843262	-	ENST00000359530.6@ATP6V1H	ENST00000359530.6	protein_coding	53843034,53841578,53832984,53829444,53817417,53814662,53811164,53801799,53795647,53771989,53769618,53756555,53743577,53715673	53843262,53841725,53833086,53829533,53817530,53814766,53811217,53801896,53795839,53772167,53769743,53756656,53743690,53716024	Gene ID= ENSG00000047249.17 TPM= 99.25 Transcript Type= protein_coding
chr8	53966556	54022529	53966556	54022529	-	ENST00000521604.6@TCEA1	ENST00000521604.6	protein_coding	54022063,54010430,53999945,53993668,53988114,53986969,53984363,53979025,53970392,53966556	54022529,54010492,54000050,53993755,53988259,53987025,53984517,53979171,53970463,53968112	Gene ID= ENSG00000187735.13 TPM= 309.87 Transcript Type= protein_coding
chr8	53966556	54021960	53966556	54021960	-	transcript2061.chr8.nic@TCEA1	transcript2061.chr8.nic	protein_coding	54021526,54010430,53999945,53993668,53988114,53986969,53984363,53979025,53970392,53966556	54021960,54010492,54000050,53993755,53988259,53987025,53984517,53979171,53970463,53968112	Gene ID= ENSG00000187735.13 TPM= 8.63 Transcript Type= NA
chr8	53966552	54022448	53966552	54022448	-	ENST00000396401.7@TCEA1	ENST00000396401.7	protein_coding	54022063,53999945,53993668,53988114,53986969,53984363,53979025,53970392,53966552	54022448,54000050,53993755,53988259,53987025,53984517,53979171,53970463,53968112	Gene ID= ENSG00000187735.13 TPM= 10.67 Transcript Type= protein_coding
chr8	54046367	54102017	54046367	54102017	-	ENST00000316963.7@LYPLA1	ENST00000316963.7	protein_coding	54101755,54100908,54065748,54063328,54062254,54055060,54052655,54051012,54046367	54102017,54100939,54065813,54063375,54062324,54055133,54052756,54051188,54048118	Gene ID= ENSG00000120992.17 TPM= 119.09 Transcript Type= protein_coding
chr8	54135210	54147901	54135210	54147901	+	ENST00000260102.8@MRPL15	ENST00000260102.8	protein_coding	54135210,54136511,54137268,54142663,54147382	54135391,54136665,54137433,54142786,54147901	Gene ID= ENSG00000137547.8 TPM= 40.87 Transcript Type= protein_coding
chr8	54457935	54460888	54457935	54460888	+	ENST00000297316.4@SOX17	ENST00000297316.4	protein_coding	54457935,54459058	54458445,54460888	Gene ID= ENSG00000164736.5 TPM= 19.85 Transcript Type= protein_coding
chr8	54559169	54769977	54559169	54769977	+	ENST00000636932.1@RP1	ENST00000636932.1	protein_coding	54559169,54620955,54622117,54648985,54652780,54656083,54663699,54673850,54678461,54679420,54679596,54679804,54699467,54701486,54706443,54720129,54726345,54734545,54738943,54754803,54755619,54758922,54769741	54559320,54621581,54622288,54649148,54652866,54656215,54663850,54673928,54678536,54679496,54679627,54679933,54699570,54701662,54706655,54720306,54726476,54734744,54739029,54754935,54755770,54759076,54769977	Gene ID= ENSG00000104237.7 TPM= 2.34 Transcript Type= protein_coding
chr8	55738758	55773405	55738758	55773405	-	transcript2113.chr8.nic@TMEM68	transcript2113.chr8.nic	protein_coding	55773227,55763936,55762635,55756244,55750964,55745061,55743481,55738758	55773405,55763980,55763028,55756411,55751157,55745121,55743620,55740218	Gene ID= ENSG00000167904.14 TPM= 2.34 Transcript Type= NA
chr8	55738758	55773354	55738758	55773354	-	ENST00000434581.6@TMEM68	ENST00000434581.6	protein_coding	55773269,55763936,55762635,55756244,55750964,55745061,55743481,55738758	55773354,55763980,55763028,55756411,55751157,55745121,55743620,55740218	Gene ID= ENSG00000167904.14 TPM= 15.18 Transcript Type= protein_coding
chr8	55738758	55773407	55738758	55773407	-	ENST00000334667.6@TMEM68	ENST00000334667.6	protein_coding	55773269,55763936,55762635,55756244,55750964,55738758	55773407,55763980,55763028,55756411,55751157,55740218	Gene ID= ENSG00000167904.14 TPM= 1.17 Transcript Type= protein_coding
chr8	55760773	55773367	55760773	55773367	-	ENST00000521229.5@TMEM68	ENST00000521229.5	protein_coding	55773269,55763936,55760773	55773367,55763980,55763028	Gene ID= ENSG00000167904.14 TPM= 1.17 Transcript Type= protein_coding
chr8	55773142	55825446	55773142	55825446	+	ENST00000260129.5@TGS1	ENST00000260129.5	protein_coding	55773142,55782748,55785719,55786238,55790182,55792698,55795978,55798914,55802457,55804893,55810881,55813040,55824581	55773719,55782812,55785891,55787060,55790299,55792784,55796152,55799220,55802606,55805036,55811097,55813118,55825446	Gene ID= ENSG00000137574.10 TPM= 21.02 Transcript Type= protein_coding
chr8	55773444	55775249	55773444	55775249	+	transcript2125.chr8.nnic@NA	transcript2125.chr8.nnic	NA	55773444	55775249	Gene ID= novel_gene_chr8_2126 TPM= 2.34 Transcript Type= NA
chr8	55777291	55781268	55777291	55781268	-	transcript2127.chr8.nnic@NA	transcript2127.chr8.nnic	NA	55777291	55781268	Gene ID= novel_gene_chr8_2128 TPM= 2.34 Transcript Type= NA
chr8	55879813	56010572	55879813	56010572	+	ENST00000519728.5@LYN	ENST00000519728.5	protein_coding	55879813,55941855,55946448,55947618,55950459,55950681,55951966,55953832,55966715,55969717,55998346,55999418,56009908	55880103,55941991,55946493,55947723,55950557,55950784,55952115,55953984,55966897,55969793,55998499,55999549,56010572	Gene ID= ENSG00000254087.7 TPM= 9.34 Transcript Type= protein_coding
chr8	56073054	56074510	56073054	56074510	-	ENST00000521262.5@RPS20	ENST00000521262.5	protein_coding	56074254,56074060,56073695,56073054	56074510,56074159,56073768,56073272	Gene ID= ENSG00000008988.9 TPM= 5.84 Transcript Type= protein_coding
chr8	56072947	56074506	56072947	56074506	-	ENST00000009589.7@RPS20	ENST00000009589.7	protein_coding	56074381,56074060,56073695,56072947	56074506,56074159,56073768,56073272	Gene ID= ENSG00000008988.9 TPM= 5.84 Transcript Type= protein_coding
chr8	56073073	56074356	56073073	56074356	-	ENST00000523936.5@RPS20	ENST00000523936.5	protein_coding	56074254,56074060,56073073	56074356,56074159,56073768	Gene ID= ENSG00000008988.9 TPM= 1.17 Transcript Type= protein_coding
chr8	56211756	56218615	56211756	56218615	+	ENST00000303759.3@CHCHD7	ENST00000303759.3	protein_coding	56211756,56212762,56214598,56216433,56217331	56211837,56212909,56214667,56216531,56218615	Gene ID= ENSG00000170791.17 TPM= 5.84 Transcript Type= protein_coding
chr8	56211686	56217538	56211686	56217538	+	ENST00000521831.5@CHCHD7	ENST00000521831.5	protein_coding	56211686,56214598,56216389,56217331	56211837,56214667,56216531,56217538	Gene ID= ENSG00000170791.17 TPM= 2.34 Transcript Type= protein_coding
chr8	56211755	56218613	56211755	56218613	+	ENST00000355315.7@CHCHD7	ENST00000355315.7	protein_coding	56211755,56214598,56216433,56217331	56211837,56214667,56216531,56218613	Gene ID= ENSG00000170791.17 TPM= 16.35 Transcript Type= protein_coding
chr8	56211798	56218619	56211798	56218619	+	ENST00000518801.5@CHCHD7	ENST00000518801.5	protein_coding	56211798,56212762,56214598,56216389,56217331	56211837,56212889,56214667,56216531,56218619	Gene ID= ENSG00000170791.17 TPM= 3.5 Transcript Type= protein_coding
chr8	56301224	56320565	56301224	56320565	-	transcript2170.chr8.nnic@SDR16C5	transcript2170.chr8.nnic	protein_coding	56320059,56316015,56312157,56308928,56306676,56305597,56303189,56301224	56320565,56316361,56312288,56309027,56306820,56305722,56303310,56301573	Gene ID= ENSG00000170786.12 TPM= 7.59 Transcript Type= NA
chr8	56301208	56320682	56301208	56320682	-	ENST00000303749.7@SDR16C5	ENST00000303749.7	protein_coding	56320059,56316015,56312157,56308928,56306676,56305597,56301208	56320682,56316361,56312288,56309027,56306820,56305722,56301573	Gene ID= ENSG00000170786.12 TPM= 58.96 Transcript Type= protein_coding
chr8	56315280	56319139	56315280	56319139	+	transcript2187.chr8.nnic@NA	transcript2187.chr8.nnic	NA	56315280	56319139	Gene ID= novel_gene_chr8_2188 TPM= 18.68 Transcript Type= NA
chr8	56962706	56993878	56962706	56993878	-	transcript2204.chr8.nic@IMPAD1	transcript2204.chr8.nic	protein_coding	56993199,56980035,56978050,56967110,56966191,56962706	56993878,56980197,56978145,56967218,56966352,56964064	Gene ID= ENSG00000104331.8 TPM= 3.5 Transcript Type= NA
chr8	56957933	56993844	56957933	56993844	-	ENST00000262644.8@IMPAD1	ENST00000262644.8	protein_coding	56993199,56980035,56978050,56966191,56957933	56993844,56980197,56978145,56966352,56964064	Gene ID= ENSG00000104331.8 TPM= 26.85 Transcript Type= protein_coding
chr8	58411264	58451501	58411264	58451501	+	ENST00000399598.6@UBXN2B	ENST00000399598.6	protein_coding	58411264,58416850,58430519,58433160,58434395,58439633,58445907,58447389	58411469,58416953,58430669,58433243,58434504,58439770,58446068,58451501	Gene ID= ENSG00000215114.8 TPM= 16.35 Transcript Type= protein_coding
chr8	58411365	58418264	58411365	58418264	+	transcript2235.chr8.nnic@NA	transcript2235.chr8.nnic	NA	58411365	58418264	Gene ID= novel_gene_chr8_2236 TPM= 2.34 Transcript Type= NA
chr8	58553254	58582858	58553254	58582858	+	ENST00000523483.5@SDCBP	ENST00000523483.5	protein_coding	58553254,58560284,58565019,58570887,58572205,58575903,58578033,58579623,58580517,58581686	58553303,58561795,58565084,58570965,58572314,58576061,58578208,58579794,58580608,58582858	Gene ID= ENSG00000137575.11 TPM= 22.18 Transcript Type= protein_coding
chr8	58553217	58582830	58553217	58582830	+	ENST00000413219.6@SDCBP	ENST00000413219.6	protein_coding	58553217,58565022,58570887,58572205,58575900,58578033,58579623,58580517,58581686	58553303,58565084,58570965,58572314,58576061,58578208,58579794,58580608,58582830	Gene ID= ENSG00000137575.11 TPM= 5.84 Transcript Type= protein_coding
chr8	58583504	58600178	58583504	58600178	-	transcript2248.chr8.nic@NSMAF	transcript2248.chr8.nic	protein_coding	58600113,58599970,58599750,58599232,58597860,58597387,58595560,58594232,58590867,58590007,58589452,58587618,58586458,58585898,58585652,58583504	58600178,58600021,58599870,58599363,58597902,58597550,58595659,58594290,58590934,58590074,58589575,58587701,58586608,58586000,58585761,58584200	Gene ID= ENSG00000035681.7 TPM= 7.01 Transcript Type= NA
chr8	58583504	58600182	58583504	58600182	-	transcript2249.chr8.nic@NSMAF	transcript2249.chr8.nic	protein_coding	58599970,58599750,58599232,58597860,58597387,58595560,58594232,58590867,58590007,58589452,58587618,58586458,58585898,58585652,58583504	58600182,58599870,58599363,58597902,58597550,58595659,58594290,58590934,58590074,58589575,58587701,58586608,58586000,58585761,58584200	Gene ID= ENSG00000035681.7 TPM= 3.5 Transcript Type= NA
chr8	58583504	58594891	58583504	58594891	-	transcript2256.chr8.nic@NSMAF	transcript2256.chr8.nic	protein_coding	58594738,58594232,58590867,58590007,58589452,58587618,58586458,58585898,58585652,58583504	58594891,58594290,58590934,58590074,58589575,58587701,58586608,58586000,58585761,58584200	Gene ID= ENSG00000035681.7 TPM= 3.5 Transcript Type= NA
chr8	58583504	58659844	58583504	58659844	-	ENST00000038176.7@NSMAF	ENST00000038176.7	protein_coding	58659573,58642984,58635468,58635305,58635189,58631496,58623709,58623377,58623220,58609604,58607769,58605927,58603210,58602058,58601445,58601285,58599970,58599750,58599232,58597860,58597387,58595560,58594232,58590867,58590007,58589452,58587618,58586458,58585898,58585652,58583504	58659844,58643073,58635546,58635372,58635225,58631546,58623780,58623424,58623272,58609733,58607840,58606035,58603386,58602137,58601535,58601348,58600021,58599870,58599363,58597902,58597550,58595659,58594290,58590934,58590074,58589575,58587701,58586608,58586000,58585761,58584200	Gene ID= ENSG00000035681.7 TPM= 64.22 Transcript Type= protein_coding
chr8	58659006	58661874	58659006	58661874	+	transcript2264.chr8.nnic@NA	transcript2264.chr8.nnic	NA	58659006	58661874	Gene ID= novel_gene_chr8_2265 TPM= 5.84 Transcript Type= NA
chr8	58805418	59119208	58805418	59119208	-	ENST00000361421.1@TOX	ENST00000361421.1	protein_coding	59118886,58959943,58939302,58851524,58838081,58826822,58815338,58808118,58805418	59119208,58960008,58939544,58851805,58838311,58826902,58815724,58808269,58807783	Gene ID= ENSG00000198846.5 TPM= 18.68 Transcript Type= protein_coding
chr8	59119218	59121346	59119218	59121346	+	ENST00000518993.1@AC090152.1	ENST00000518993.1	antisense_RNA	59119218,59120336	59119285,59121346	Gene ID= ENSG00000167912.5 TPM= 2.34 Transcript Type= antisense_RNA
chr8	60187347	60281412	60187347	60281412	-	ENST00000317995.4@CA8	ENST00000317995.4	protein_coding	60281048,60279689,60265925,60232284,60226873,60224537,60222649,60208750,60187347	60281412,60279880,60266049,60232379,60226935,60224585,60222761,60208919,60189985	Gene ID= ENSG00000178538.9 TPM= 2.34 Transcript Type= protein_coding
chr8	60516857	60623627	60516857	60623627	+	ENST00000262646.11@RAB2A	ENST00000262646.11	protein_coding	60516857,60558852,60572046,60584208,60584723,60591858,60618580,60620674	60517253,60558923,60572113,60584290,60584815,60591969,60618648,60623627	Gene ID= ENSG00000104388.14 TPM= 23.35 Transcript Type= protein_coding
chr8	60518546	60526302	60518546	60526302	-	transcript2302.chr8.nnic@NA	transcript2302.chr8.nnic	NA	60518546	60526302	Gene ID= novel_gene_chr8_2303 TPM= 2.34 Transcript Type= NA
chr8	60575095	60577167	60575095	60577167	-	transcript2300.chr8.nnic@NA	transcript2300.chr8.nnic	NA	60575095	60577167	Gene ID= novel_gene_chr8_2301 TPM= 2.34 Transcript Type= NA
chr8	60678716	60781265	60678716	60781265	+	transcript2305.chr8.nic@CHD7	transcript2305.chr8.nic	protein_coding	60678716,60741259,60781000	60679082,60743097,60781265	Gene ID= ENSG00000171316.11 TPM= 8.17 Transcript Type= NA
chr8	60678778	60868028	60678778	60868028	+	ENST00000423902.6@CHD7	ENST00000423902.6	protein_coding	60678778,60741259,60781000,60794986,60800388,60801528,60808217,60816387,60820007,60821790,60822024,60822503,60823840,60828663,60830322,60836073,60836817,60837668,60838076,60841644,60841847,60844864,60845250,60848515,60849051,60850493,60851032,60851262,60852019,60852498,60852829,60854363,60855975,60856445,60860904,60862196,60862548,60865016	60679082,60743097,60781430,60795127,60800525,60801593,60808272,60816501,60820090,60821927,60822145,60822746,60824016,60828806,60830577,60836283,60837012,60837835,60838255,60841754,60842052,60845063,60845409,60848604,60849154,60850622,60851104,60851319,60852247,60852706,60853500,60854523,60856202,60856888,60861125,60862336,60862652,60868028	Gene ID= ENSG00000171316.11 TPM= 2.34 Transcript Type= protein_coding
chr8	60965802	60967775	60965802	60967775	-	ENST00000525556.1@AC022182.2	ENST00000525556.1	lincRNA	60967573,60965802	60967775,60966457	Gene ID= ENSG00000254802.1 TPM= 1.17 Transcript Type= lincRNA
chr8	61500556	61714562	61500556	61714562	-	transcript2316.chr8.nic@ASPH	transcript2316.chr8.nic	protein_coding	61714269,61684039,61680968,61653568,61651050,61646750,61644600,61643386,61642888,61638322,61637947,61633683,61618978,61583944,61576772,61567168,61562744,61555924,61553031,61548071,61525977,61518032,61517528,61500556	61714562,61684188,61681036,61653660,61651124,61646878,61644632,61643433,61642920,61638363,61638003,61633727,61619019,61584029,61576858,61567318,61562880,61556022,61553120,61548208,61526112,61518123,61517661,61503509	Gene ID= ENSG00000198363.17 TPM= 8.37 Transcript Type= NA
chr8	61624537	61714592	61624537	61714592	-	transcript2359.chr8.nic@ASPH	transcript2359.chr8.nic	protein_coding	61714269,61684039,61680968,61653568,61651050,61644600,61643386,61642888,61638322,61637947,61633683,61624537	61714592,61684188,61681036,61653660,61651124,61644632,61643433,61642920,61638363,61638003,61633727,61626280	Gene ID= ENSG00000198363.17 TPM= 8.41 Transcript Type= NA
chr8	61500556	61714559	61500556	61714559	-	ENST00000379454.8@ASPH	ENST00000379454.8	protein_coding	61714269,61684039,61680968,61653568,61651050,61646750,61644600,61643945,61643386,61642888,61638322,61637947,61633683,61618978,61583944,61576772,61567168,61562744,61555924,61553031,61548071,61525977,61518032,61517528,61500556	61714559,61684188,61681036,61653660,61651124,61646878,61644632,61644001,61643433,61642920,61638363,61638003,61633727,61619019,61584029,61576858,61567318,61562880,61556022,61553120,61548208,61526112,61518123,61517661,61503509	Gene ID= ENSG00000198363.17 TPM= 7.01 Transcript Type= protein_coding
chr8	61623710	61714596	61623710	61714596	-	ENST00000356457.9@ASPH	ENST00000356457.9	protein_coding	61714269,61684039,61680968,61653568,61651050,61646750,61644600,61643945,61643386,61642888,61638322,61637947,61633683,61623710	61714596,61684188,61681036,61653660,61651124,61646878,61644632,61644001,61643433,61642920,61638363,61638003,61633727,61626280	Gene ID= ENSG00000198363.17 TPM= 3.5 Transcript Type= protein_coding
chr8	61624539	61714568	61624539	61714568	-	ENST00000518068.5@ASPH	ENST00000518068.5	protein_coding	61714269,61684039,61680968,61653568,61651050,61644600,61643945,61643386,61642888,61638322,61637947,61633683,61624539	61714568,61684188,61681036,61653660,61651124,61644632,61644001,61643433,61642920,61638363,61638003,61633727,61626280	Gene ID= ENSG00000198363.17 TPM= 30.36 Transcript Type= protein_coding
chr8	61624537	61714525	61624537	61714525	-	ENST00000519234.5@ASPH	ENST00000519234.5	protein_coding	61714269,61684039,61682439,61680968,61653568,61651050,61646750,61644600,61643945,61643386,61642888,61638322,61637947,61633683,61624537	61714525,61684188,61682483,61681036,61653660,61651124,61646878,61644632,61644001,61643433,61642920,61638360,61638003,61633727,61626280	Gene ID= ENSG00000198363.17 TPM= 7.01 Transcript Type= protein_coding
chr8	63038924	63041056	63038924	63041056	+	transcript2379.chr8.nnic@NA	transcript2379.chr8.nnic	NA	63038924	63041056	Gene ID= novel_gene_chr8_2380 TPM= 2.34 Transcript Type= NA
chr8	63168564	63212786	63168564	63212786	+	transcript2384.chr8.nnic@YTHDF3	transcript2384.chr8.nnic	protein_coding	63168564,63169387,63172653,63173651,63175331,63186147,63209683	63168901,63169411,63172798,63173681,63175416,63187745,63212786	Gene ID= ENSG00000185728.16 TPM= 3.21 Transcript Type= NA
chr8	63168604	63212786	63168604	63212786	+	transcript2387.chr8.nnic@YTHDF3	transcript2387.chr8.nnic	protein_coding	63168604,63168716,63169387,63175331,63186147,63209683	63168665,63168901,63169411,63175416,63187745,63212786	Gene ID= ENSG00000185728.16 TPM= 3.21 Transcript Type= NA
chr8	63168553	63212786	63168553	63212786	+	ENST00000539294.5@YTHDF3	ENST00000539294.5	protein_coding	63168553,63169387,63175331,63186147,63209683	63168901,63169411,63175416,63187745,63212786	Gene ID= ENSG00000185728.16 TPM= 44.08 Transcript Type= protein_coding
chr8	63168621	63212786	63168621	63212786	+	transcript2392.chr8.nnic@YTHDF3	transcript2392.chr8.nnic	protein_coding	63168621,63169387,63175331,63186147,63209683	63168814,63169411,63175416,63187745,63212786	Gene ID= ENSG00000185728.16 TPM= 3.21 Transcript Type= NA
chr8	64580367	64583628	64580367	64583628	+	ENST00000321870.2@BHLHE22	ENST00000321870.2	protein_coding	64580367	64583628	Gene ID= ENSG00000180828.2 TPM= 3.5 Transcript Type= protein_coding
chr8	64596135	64798761	64596135	64798761	-	ENST00000310193.3@CYP7B1	ENST00000310193.3	protein_coding	64798466,64624403,64615691,64615026,64604682,64596135	64798761,64624539,64616281,64615232,64604857,64596929	Gene ID= ENSG00000172817.3 TPM= 1.17 Transcript Type= protein_coding
chr8	64590848	64595417	64590848	64595417	-	transcript2398.chr8.nnic@NA	transcript2398.chr8.nnic	NA	64590848	64595417	Gene ID= novel_gene_chr8_2399 TPM= 2.34 Transcript Type= NA
chr8	65602456	65634207	65602456	65634207	-	ENST00000276569.7@ARMC1	ENST00000276569.7	protein_coding	65633998,65627216,65622263,65613244,65605422,65605263,65602456	65634207,65627433,65622354,65613433,65605538,65605337,65604585	Gene ID= ENSG00000104442.9 TPM= 31.53 Transcript Type= protein_coding
chr8	65644739	65710556	65644739	65710556	+	ENST00000262146.8@MTFR1	ENST00000262146.8	protein_coding	65644739,65669873,65682353,65693644,65704694,65707010,65707843,65708976	65644784,65670018,65682451,65693759,65704929,65707256,65708011,65710556	Gene ID= ENSG00000066855.15 TPM= 8.17 Transcript Type= protein_coding
chr8	65721798	65841508	65721798	65841508	-	ENST00000396642.7@PDE7A	ENST00000396642.7	protein_coding	65841371,65782783,65779720,65747652,65745407,65739502,65734794,65727170,65726875,65724777,65724255,65721798	65841508,65782843,65779803,65747803,65745470,65739597,65734894,65727301,65726966,65724921,65724351,65723621	Gene ID= ENSG00000205268.10 TPM= 1.17 Transcript Type= protein_coding
chr8	65979196	66060604	65979196	66060604	+	transcript2426.chr8.nnic@DNAJC5B	transcript2426.chr8.nnic	protein_coding	65979196,66043488,66051531,66056466	65979293,66043611,66051666,66060604	Gene ID= ENSG00000147570.9 TPM= 2.34 Transcript Type= NA
chr8	66429028	66430733	66429028	66430733	+	ENST00000320270.3@RRS1	ENST00000320270.3	protein_coding	66429028	66430733	Gene ID= ENSG00000179041.3 TPM= 32.69 Transcript Type= protein_coding
chr8	66432486	66468907	66432486	66468907	+	ENST00000396623.7@ADHFE1	ENST00000396623.7	protein_coding	66432486,66440162,66442798,66444367,66444594,66445218,66447264,66448865,66451953,66454059,66456817,66457070,66460308,66468269	66432575,66440199,66442844,66444420,66444748,66445414,66447341,66448970,66452105,66454157,66456895,66457166,66460465,66468907	Gene ID= ENSG00000147576.15 TPM= 2.34 Transcript Type= protein_coding
chr8	66432501	66468809	66432501	66468809	+	ENST00000426810.5@ADHFE1	ENST00000426810.5	protein_coding	66432501,66440162,66444367,66444594,66445218,66447264,66448865,66451953,66453710,66456817,66457070,66460308,66468269	66432575,66440199,66444420,66444748,66445414,66447341,66448970,66452105,66454157,66456895,66457166,66460465,66468809	Gene ID= ENSG00000147576.15 TPM= 3.89 Transcript Type= nonsense_mediated_decay
chr8	66432499	66468807	66432499	66468807	+	ENST00000276576.11@ADHFE1	ENST00000276576.11	protein_coding	66432499,66440162,66444367,66444594,66445218,66447264,66448865,66451953,66454059,66456817,66457070,66460308,66468269	66432575,66440199,66444420,66444748,66445414,66447341,66448970,66452105,66454157,66456895,66457166,66460465,66468807	Gene ID= ENSG00000147576.15 TPM= 3.89 Transcript Type= nonsense_mediated_decay
chr8	66432498	66468809	66432498	66468809	+	ENST00000424777.6@ADHFE1	ENST00000424777.6	protein_coding	66432498,66440162,66442798,66444367,66444594,66445218,66447264,66448865,66451953,66453710,66456817,66457070,66460308,66468269	66432575,66440199,66442844,66444420,66444748,66445414,66447341,66448970,66452105,66454157,66456895,66457166,66460465,66468809	Gene ID= ENSG00000147576.15 TPM= 9.73 Transcript Type= nonsense_mediated_decay
chr8	66628487	66667217	66628487	66667217	-	ENST00000310421.4@VCPIP1	ENST00000310421.4	protein_coding	66664249,66651458,66628487	66667217,66651544,66635372	Gene ID= ENSG00000175073.7 TPM= 5.84 Transcript Type= protein_coding
chr8	66671690	66673150	66671690	66673150	-	transcript2452.chr8.nnic@NA	transcript2452.chr8.nnic	NA	66671690	66673150	Gene ID= novel_gene_chr8_2453 TPM= 2.34 Transcript Type= NA
chr8	66775181	66862020	66775181	66862020	+	ENST00000396596.2@SGK3	ENST00000396596.2	protein_coding	66775181,66793616,66798542,66804375,66813853,66822372,66828654,66831254,66835763,66835943,66840003,66840211,66841024,66843452,66847193,66850831,66859411	66775319,66793832,66798625,66804447,66813928,66822459,66828703,66831311,66835846,66836074,66840115,66840247,66841110,66843547,66847348,66850920,66862020	Gene ID= ENSG00000104205.12 TPM= 23.35 Transcript Type= protein_coding
chr8	66712791	66860472	66712791	66860472	+	transcript2471.chr8.nnic@SGK3	transcript2471.chr8.nnic	protein_coding	66712791,66793616,66798542,66804375,66813853,66822372,66828654,66831254,66841024,66843452,66847193,66850831,66859411	66712833,66793832,66798625,66804447,66813928,66822459,66828703,66831311,66841110,66843547,66847348,66850920,66860472	Gene ID= ENSG00000104205.12 TPM= 2.34 Transcript Type= NA
chr8	66921818	66925596	66921818	66925596	-	ENST00000520944.5@SNHG6	ENST00000520944.5	processed_transcript	66925437,66922614,66922324,66921818	66925596,66922725,66922392,66922114	Gene ID= ENSG00000245910.8 TPM= 9.34 Transcript Type= lincRNA
chr8	66921987	66925541	66921987	66925541	-	ENST00000521399.5@SNHG6	ENST00000521399.5	processed_transcript	66925437,66922324,66921987	66925541,66922392,66922114	Gene ID= ENSG00000245910.8 TPM= 1.17 Transcript Type= lincRNA
chr8	67043079	67062343	67043079	67062343	-	transcript2481.chr8.nic@COPS5	transcript2481.chr8.nic	protein_coding	67062106,67061854,67059211,67058083,67057380,67056519,67051230,67045812,67043079	67062343,67062024,67059445,67058211,67057445,67056604,67051341,67045960,67043317	Gene ID= ENSG00000121022.13 TPM= 7.01 Transcript Type= NA
chr8	67043079	67062317	67043079	67062317	-	ENST00000357849.8@COPS5	ENST00000357849.8	protein_coding	67061854,67059211,67058083,67057380,67056519,67051230,67045812,67043079	67062317,67059445,67058211,67057445,67056604,67051341,67045960,67043317	Gene ID= ENSG00000121022.13 TPM= 67.72 Transcript Type= protein_coding
chr8	67043079	67062333	67043079	67062333	-	transcript2484.chr8.nnic@COPS5	transcript2484.chr8.nnic	protein_coding	67062106,67059211,67058083,67057380,67056519,67051230,67045812,67043079	67062333,67059445,67058211,67057445,67056604,67051341,67045960,67043317	Gene ID= ENSG00000121022.13 TPM= 5.84 Transcript Type= NA
chr8	67064357	67196263	67064357	67196263	+	transcript2503.chr8.nnic@CSPP1	transcript2503.chr8.nnic	protein_coding	67064357,67074243,67076482,67086007,67093543,67095293,67103037,67105905,67111972,67113805,67115914,67118248,67118743,67131951,67137456,67149783,67154024,67158447,67158991,67161811,67163732,67164391,67172416,67175296,67177680,67179863,67190650,67193464,67195382	67064538,67074351,67076581,67086110,67093641,67095732,67103135,67105975,67112065,67113862,67116122,67118369,67118821,67132080,67137603,67149935,67154136,67158596,67159137,67161915,67163798,67164508,67172555,67175436,67177726,67179926,67190759,67193602,67196263	Gene ID= ENSG00000104218.14 TPM= 2.34 Transcript Type= NA
chr8	67064368	67196263	67064368	67196263	+	ENST00000262210.9@CSPP1	ENST00000262210.9	protein_coding	67064368,67074243,67076482,67086007,67093543,67095293,67103037,67105905,67111972,67113805,67115914,67118248,67118743,67131951,67137456,67149783,67154024,67158447,67158991,67161811,67163732,67164391,67172416,67175296,67177680,67179863,67190650,67193464,67195382	67064496,67074351,67076581,67086110,67093641,67095732,67103135,67105975,67112065,67113862,67116122,67118369,67118821,67132080,67137603,67149935,67154136,67158596,67159137,67161915,67163798,67164508,67172555,67175436,67177726,67179926,67190759,67193602,67196263	Gene ID= ENSG00000104218.14 TPM= 5.84 Transcript Type= protein_coding
chr8	67197649	67343923	67197649	67343923	-	transcript2485.chr8.nic@ARFGEF1	transcript2485.chr8.nic	protein_coding	67343510,67343164,67302436,67301224,67299209,67296431,67291847,67287955,67277282,67275976,67271702,67267343,67267091,67266876,67266006,67259815,67258085,67257732,67253451,67251299,67240162,67238735,67238343,67232855,67228224,67227963,67227447,67227137,67226023,67224903,67219431,67218003,67217782,67216590,67211483,67204680,67203083,67201467,67200396,67197649	67343923,67343336,67302466,67301380,67299355,67296610,67292123,67288065,67277457,67276109,67271936,67267442,67267230,67266984,67266207,67259926,67258290,67257816,67253622,67251450,67240290,67238893,67238493,67232945,67228264,67228132,67227598,67227309,67226183,67225033,67219560,67218138,67217920,67216662,67211615,67204819,67203251,67201605,67200513,67199098	Gene ID= ENSG00000066777.8 TPM= 4.67 Transcript Type= NA
chr8	67197649	67343793	67197649	67343793	-	transcript2494.chr8.nnic@ARFGEF1	transcript2494.chr8.nnic	protein_coding	67343164,67302436,67301224,67299209,67296431,67291847,67287955,67277282,67275976,67271702,67267343,67267091,67266876,67266006,67259815,67258085,67257732,67253451,67251299,67240162,67238735,67238343,67232855,67228224,67227963,67227447,67227137,67226023,67224903,67219431,67218003,67217782,67216608,67211483,67204680,67203083,67201467,67200396,67197649	67343793,67302466,67301380,67299355,67296610,67292123,67288065,67277457,67276109,67271936,67267442,67267230,67266984,67266207,67259926,67258290,67257816,67253622,67251450,67240290,67238893,67238493,67232945,67228264,67228132,67227598,67227309,67226183,67225033,67219560,67218138,67217920,67216662,67211615,67204819,67203251,67201605,67200513,67199098	Gene ID= ENSG00000066777.8 TPM= 2.34 Transcript Type= NA
chr8	67197649	67343677	67197649	67343677	-	ENST00000262215.7@ARFGEF1	ENST00000262215.7	protein_coding	67343164,67302436,67301224,67299209,67296431,67291847,67287955,67277282,67275976,67271702,67267343,67267091,67266876,67266006,67259815,67258085,67257732,67253451,67251299,67240162,67238735,67238343,67232855,67228224,67227963,67227447,67227137,67226023,67224903,67219431,67218003,67217782,67216590,67211483,67204680,67203083,67201467,67200396,67197649	67343677,67302466,67301380,67299355,67296610,67292123,67288065,67277457,67276109,67271936,67267442,67267230,67266984,67266207,67259926,67258290,67257816,67253622,67251450,67240290,67238893,67238493,67232945,67228264,67228132,67227598,67227309,67226183,67225033,67219560,67218138,67217920,67216662,67211615,67204819,67203251,67201605,67200513,67199098	Gene ID= ENSG00000066777.8 TPM= 10.51 Transcript Type= protein_coding
chr8	67952153	68033132	67952153	68033132	+	transcript2529.chr8.nic@PREX2	transcript2529.chr8.nic	protein_coding	67952153,68017846,68019549,68022036,68027222,68030497	67952535,68017917,68019671,68022140,68027323,68033132	Gene ID= ENSG00000046889.18 TPM= 2.34 Transcript Type= NA
chr8	67952118	68237030	67952118	68237030	+	ENST00000288368.4@PREX2	ENST00000288368.4	protein_coding	67952118,68017846,68019549,68022036,68027222,68030497,68038159,68044487,68053097,68055830,68060679,68069033,68069835,68072495,68077397,68080443,68080746,68083240,68087724,68090579,68093605,68097017,68099682,68108109,68109416,68115753,68118550,68119432,68120196,68120921,68127378,68134059,68138415,68146209,68157322,68191722,68192335,68217616,68224559,68231333	67952535,68017917,68019671,68022140,68027323,68030658,68038292,68044590,68053246,68055974,68060779,68069136,68069884,68072570,68077469,68080585,68080838,68083388,68087809,68090715,68093722,68097201,68099843,68108331,68109623,68115932,68118644,68119514,68120286,68121049,68127419,68134276,68138517,68146352,68157436,68191788,68192525,68217718,68224626,68237030	Gene ID= ENSG00000046889.18 TPM= 57.21 Transcript Type= protein_coding
chr8	68303468	68331491	68303468	68331491	-	ENST00000512294.6@C8orf34-AS1	ENST00000512294.6	antisense_RNA	68331307,68306518,68303468	68331491,68306598,68304801	Gene ID= ENSG00000248801.6 TPM= 11.68 Transcript Type= antisense_RNA
chr8	68330722	68818561	68330722	68818561	+	ENST00000518698.5@C8orf34	ENST00000518698.5	protein_coding	68330722,68439499,68446329,68468692,68488023,68521799,68532983,68640376,68708994,68721361,68776399,68787443,68815886,68818239	68331339,68439646,68446460,68468820,68488051,68521971,68533149,68640511,68709079,68721437,68776449,68787536,68815945,68818561	Gene ID= ENSG00000165084.15 TPM= 3.5 Transcript Type= protein_coding
chr8	69492761	69660055	69492761	69660055	+	ENST00000402687.8@SULF1	ENST00000402687.8	protein_coding	69492761,69495765,69501874,69563539,69563916,69575970,69586357,69588972,69600603,69601654,69603192,69603600,69604803,69621035,69623942,69627210,69627772,69628171,69629504,69638502,69638735,69640808,69658505	69493125,69495926,69501968,69563611,69564147,69576209,69586508,69589141,69600753,69601829,69603320,69603656,69604932,69621251,69624197,69627306,69627866,69628236,69629679,69638644,69638858,69640841,69660055	Gene ID= ENSG00000137573.13 TPM= 6.81 Transcript Type= protein_coding
chr8	69466624	69660915	69466624	69660915	+	ENST00000458141.6@SULF1	ENST00000458141.6	protein_coding	69466624,69501874,69563539,69563916,69575970,69586357,69588972,69600603,69601654,69603192,69603600,69604803,69621035,69623942,69627210,69627772,69628171,69629504,69638502,69638735,69640808,69658505	69466950,69501968,69563611,69564147,69576209,69586508,69589141,69600753,69601829,69603320,69603656,69604932,69621251,69624197,69627306,69627866,69628236,69629679,69638644,69638858,69640841,69660915	Gene ID= ENSG00000137573.13 TPM= 17.9 Transcript Type= protein_coding
chr8	69492793	69660055	69492793	69660055	+	ENST00000419716.7@SULF1	ENST00000419716.7	protein_coding	69492793,69501874,69563539,69563916,69575970,69586357,69588972,69600603,69601654,69603192,69603600,69604803,69621035,69623942,69627210,69627772,69628171,69629504,69638502,69638735,69640808,69658505	69493125,69501968,69563611,69564147,69576209,69586508,69589141,69600753,69601829,69603320,69603656,69604932,69621251,69624197,69627306,69627866,69628236,69629679,69638644,69638858,69640841,69660055	Gene ID= ENSG00000137573.13 TPM= 12.65 Transcript Type= protein_coding
chr8	70573442	70608369	70573442	70608369	-	ENST00000262213.6@TRAM1	ENST00000262213.6	protein_coding	70608077,70600019,70598134,70597895,70596263,70594506,70587106,70586895,70583650,70583164,70573442	70608369,70600082,70598255,70598011,70596321,70594590,70587176,70586999,70583793,70583324,70575005	Gene ID= ENSG00000067167.7 TPM= 715.73 Transcript Type= protein_coding
chr8	70573442	70607778	70573442	70607778	-	ENST00000521425.5@TRAM1	ENST00000521425.5	protein_coding	70606877,70600019,70598134,70597895,70596263,70594506,70587106,70586895,70583650,70583164,70573442	70607778,70600082,70598255,70598011,70596321,70594590,70587176,70586999,70583793,70583324,70575005	Gene ID= ENSG00000067167.7 TPM= 29.19 Transcript Type= protein_coding
chr8	70637256	70669157	70637256	70669157	-	ENST00000276590.4@LACTB2	ENST00000276590.4	protein_coding	70668999,70661734,70657756,70644065,70640902,70638548,70637256	70669157,70661897,70657882,70644243,70641050,70638629,70637903	Gene ID= ENSG00000147592.8 TPM= 8.17 Transcript Type= protein_coding
chr8	71843969	72054959	71843969	72054959	+	transcript2576.chr8.nic@MSC-AS1	transcript2576.chr8.nic	antisense_RNA	71843969,71962923,71965409,72052539	71844422,71963048,71965534,72054959	Gene ID= ENSG00000235531.9 TPM= 3.5 Transcript Type= NA
chr8	71841549	71844468	71841549	71844468	-	ENST00000325509.4@MSC	ENST00000325509.4	protein_coding	71843645,71841549	71844468,71842747	Gene ID= ENSG00000178860.8 TPM= 8.17 Transcript Type= protein_coding
chr8	73008864	73046471	73008864	73046471	+	ENST00000276603.9@TERF1	ENST00000276603.9	protein_coding	73008864,73013895,73020684,73022216,73024822,73026940,73030336,73032042,73039116,73045961	73009205,73013990,73020805,73022302,73024971,73027052,73030395,73032133,73039219,73046471	Gene ID= ENSG00000147601.13 TPM= 2.34 Transcript Type= protein_coding
chr8	73061423	73067193	73061423	73067193	-	transcript2595.chr8.nnic@NA	transcript2595.chr8.nnic	NA	73061423	73067193	Gene ID= novel_gene_chr8_2596 TPM= 2.34 Transcript Type= NA
chr8	73290639	73293898	73290639	73293898	-	ENST00000352983.6@RPL7	ENST00000352983.6	protein_coding	73293599,73292689,73292239,73291773,73291552,73291043,73290639	73293898,73292797,73292405,73291910,73291661,73291252,73290705	Gene ID= ENSG00000147604.13 TPM= 963.85 Transcript Type= protein_coding
chr8	73294612	73325281	73294612	73325281	+	ENST00000240285.9@RDH10	ENST00000240285.9	protein_coding	73294612,73297194,73319096,73320932,73322679,73322913	73295578,73297429,73319194,73321077,73322810,73325281	Gene ID= ENSG00000121039.9 TPM= 17.51 Transcript Type= protein_coding
chr8	73420371	73746937	73420371	73746937	-	ENST00000524300.5@STAU2	ENST00000524300.5	protein_coding	73746783,73739756,73738284,73709032,73688654,73673107,73617292,73615675,73613744,73603726,73595166,73582770,73552012,73422614,73420371	73746937,73739868,73738349,73709162,73688813,73673242,73617451,73615782,73613956,73603863,73595297,73582830,73552319,73422702,73421465	Gene ID= ENSG00000040341.17 TPM= 1.75 Transcript Type= protein_coding
chr8	73420369	73746893	73420369	73746893	-	transcript2611.chr8.nic@STAU2	transcript2611.chr8.nic	protein_coding	73746783,73739756,73738284,73688654,73673107,73617292,73615675,73613744,73603726,73595166,73582770,73552012,73422614,73420369	73746893,73739868,73738349,73688813,73673242,73617451,73615782,73613956,73603863,73595297,73582830,73552319,73422702,73421465	Gene ID= ENSG00000040341.17 TPM= 5.25 Transcript Type= NA
chr8	73526835	73746893	73526835	73746893	-	transcript2616.chr8.nic@STAU2	transcript2616.chr8.nic	protein_coding	73746783,73739756,73738284,73688654,73673107,73617292,73615675,73613744,73603726,73595166,73582770,73552012,73526835	73746893,73739868,73738349,73688813,73673242,73617451,73615782,73613956,73603863,73595297,73582830,73552319,73527804	Gene ID= ENSG00000040341.17 TPM= 7.01 Transcript Type= NA
chr8	73549604	73746893	73549604	73746893	-	transcript2618.chr8.nic@STAU2	transcript2618.chr8.nic	protein_coding	73746783,73739756,73738284,73709032,73688654,73673107,73617292,73615675,73613744,73603726,73595166,73582770,73549604	73746893,73739868,73738349,73709162,73688813,73673242,73617451,73615782,73613956,73603863,73595297,73582830,73552319	Gene ID= ENSG00000040341.17 TPM= 3.5 Transcript Type= NA
chr8	73792363	73878909	73792363	73878909	-	ENST00000419880.7@UBE2W	ENST00000419880.7	protein_coding	73878808,73870269,73830381,73825147,73810474,73805651,73792363	73878909,73870301,73830472,73825249,73810629,73805726,73794115	Gene ID= ENSG00000104343.19 TPM= 4.67 Transcript Type= protein_coding
chr8	73786220	73878910	73786220	73878910	-	ENST00000517608.5@UBE2W	ENST00000517608.5	protein_coding	73878808,73830381,73825147,73810474,73805651,73786220	73878910,73830472,73825249,73810629,73805726,73794115	Gene ID= ENSG00000104343.19 TPM= 7.01 Transcript Type= protein_coding
chr8	73790605	73878875	73790605	73878875	-	ENST00000422906.6@UBE2W	ENST00000422906.6	protein_coding	73878808,73830381,73810474,73805651,73790605	73878875,73830472,73810629,73805726,73794115	Gene ID= ENSG00000104343.19 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr8	73792360	73878825	73792360	73878825	-	ENST00000602593.5@UBE2W	ENST00000602593.5	protein_coding	73878808,73830381,73825147,73810474,73805651,73792360	73878825,73830472,73825249,73810629,73805726,73794115	Gene ID= ENSG00000104343.19 TPM= 3.5 Transcript Type= protein_coding
chr8	73945608	73972170	73945608	73972170	-	ENST00000520210.1@ELOC	ENST00000520210.1	protein_coding	73972077,73955911,73945608	73972170,73956054,73946820	Gene ID= ENSG00000154582.16 TPM= 1.17 Transcript Type= protein_coding
chr8	73945119	73972287	73945119	73972287	-	ENST00000518127.5@ELOC	ENST00000518127.5	protein_coding	73972245,73959765,73955911,73945119	73972287,73959818,73956054,73946820	Gene ID= ENSG00000154582.16 TPM= 1.17 Transcript Type= protein_coding
chr8	73945617	73972247	73945617	73972247	-	ENST00000520242.5@ELOC	ENST00000520242.5	protein_coding	73972077,73959765,73955911,73945617	73972247,73959818,73956054,73946820	Gene ID= ENSG00000154582.16 TPM= 8.17 Transcript Type= protein_coding
chr8	73946401	73972106	73946401	73972106	-	ENST00000284811.12@ELOC	ENST00000284811.12	protein_coding	73972042,73959765,73955911,73946401	73972106,73959818,73956054,73946820	Gene ID= ENSG00000154582.16 TPM= 2.34 Transcript Type= protein_coding
chr8	73976209	73982783	73976209	73982783	+	ENST00000312184.5@TMEM70	ENST00000312184.5	protein_coding	73976209,73978756,73981155	73976491,73978861,73982783	Gene ID= ENSG00000175606.10 TPM= 1.17 Transcript Type= protein_coding
chr8	73991352	74029087	73991352	74029087	+	ENST00000284818.6@LY96	ENST00000284818.6	protein_coding	73991352,74004796,74010001,74026789,74028956	73991554,74004885,74010129,74026841,74029087	Gene ID= ENSG00000154589.6 TPM= 18.68 Transcript Type= protein_coding
chr8	74234708	74321585	74234708	74321585	-	transcript2685.chr8.nnic@JPH1	transcript2685.chr8.nnic	protein_coding	74320909,74314861,74259385,74244529,74237208,74234708	74321585,74315620,74259503,74245175,74237303,74236755	Gene ID= ENSG00000104369.4 TPM= 12.26 Transcript Type= NA
chr8	74234704	74321585	74234704	74321585	-	transcript2686.chr8.nic@JPH1	transcript2686.chr8.nic	protein_coding	74320909,74314861,74259385,74244529,74234704	74321585,74315620,74259503,74245175,74237303	Gene ID= ENSG00000104369.4 TPM= 9.92 Transcript Type= NA
chr8	76982957	77000267	76982957	77000267	-	ENST00000522527.5@PEX2	ENST00000522527.5	protein_coding	76999990,76986187,76982957	77000267,76986296,76984195	Gene ID= ENSG00000164751.14 TPM= 1.17 Transcript Type= protein_coding
chr8	78516139	78605267	78516139	78605267	+	ENST00000396418.6@PKIA	ENST00000396418.6	protein_coding	78516139,78572811,78598358,78601742	78516468,78572939,78598535,78605267	Gene ID= ENSG00000171033.12 TPM= 7.01 Transcript Type= protein_coding
chr8	78516355	78603185	78516355	78603185	+	ENST00000352966.9@PKIA	ENST00000352966.9	protein_coding	78516355,78598358,78601742	78516468,78598535,78603185	Gene ID= ENSG00000171033.12 TPM= 5.84 Transcript Type= protein_coding
chr8	78666069	78719765	78666069	78719765	+	transcript2708.chr8.nic@ZC2HC1A	transcript2708.chr8.nic	protein_coding	78666069,78675787,78678563,78686467,78689222,78697407,78698414,78711990,78715221,78717328	78666164,78675863,78678679,78686608,78689373,78697506,78698513,78712106,78715328,78719765	Gene ID= ENSG00000104427.11 TPM= 3.5 Transcript Type= NA
chr8	78666047	78719765	78666047	78719765	+	ENST00000263849.8@ZC2HC1A	ENST00000263849.8	protein_coding	78666047,78675787,78678563,78686467,78689222,78697407,78698414,78715221,78717328	78666164,78675863,78678679,78686608,78689373,78697506,78698513,78715328,78719765	Gene ID= ENSG00000104427.11 TPM= 16.35 Transcript Type= protein_coding
chr8	78732772	78805523	78732772	78805523	-	ENST00000263851.8@IL7	ENST00000263851.8	protein_coding	78804913,78798072,78740002,78738504,78736474,78732772	78805523,78798208,78740082,78738635,78736527,78733832	Gene ID= ENSG00000104432.13 TPM= 3.5 Transcript Type= protein_coding
chr8	79764013	79767819	79764013	79767819	-	transcript2723.chr8.nic@HEY1	transcript2723.chr8.nic	protein_coding	79767575,79767219,79766651,79764013	79767819,79767294,79767092,79765771	Gene ID= ENSG00000164683.16 TPM= 5.45 Transcript Type= NA
chr8	79764010	79767863	79764010	79767863	-	ENST00000354724.7@HEY1	ENST00000354724.7	protein_coding	79767575,79767219,79767009,79766651,79764010	79767863,79767294,79767092,79766732,79765771	Gene ID= ENSG00000164683.16 TPM= 53.32 Transcript Type= protein_coding
chr8	79764013	79767857	79764013	79767857	-	ENST00000337919.9@HEY1	ENST00000337919.9	protein_coding	79767575,79767219,79766997,79766651,79764013	79767857,79767294,79767092,79766732,79765771	Gene ID= ENSG00000164683.16 TPM= 10.12 Transcript Type= protein_coding
chr8	79918717	80030271	79918717	80030271	-	ENST00000276585.8@MRPS28	ENST00000276585.8	protein_coding	80030036,80002999,79918717	80030271,80003180,79919148	Gene ID= ENSG00000147586.9 TPM= 4.67 Transcript Type= protein_coding
chr8	80034745	80171558	80034745	80171558	-	ENST00000379096.9@TPD52	ENST00000379096.9	protein_coding	80171425,80064478,80053282,80051527,80042620,80034745	80171558,80064593,80053430,80051628,80042668,80038235	Gene ID= ENSG00000076554.15 TPM= 7.01 Transcript Type= protein_coding
chr8	80486213	80521772	80486213	80521772	+	ENST00000455036.7@ZBTB10	ENST00000455036.7	protein_coding	80486213,80499494,80513910,80518403,80518782,80519223	80487782,80500382,80514008,80518579,80518954,80521772	Gene ID= ENSG00000205189.11 TPM= 15.18 Transcript Type= protein_coding
chr8	80638533	80874497	80638533	80874497	-	transcript2758.chr8.nic@ZNF704	transcript2758.chr8.nic	protein_coding	80873544,80821374,80693004,80687226,80670503,80664815,80659585,80643035,80638533	80874497,80821615,80693107,80687458,80670603,80665082,80659689,80643129,80641477	Gene ID= ENSG00000164684.13 TPM= 12.84 Transcript Type= NA
chr8	80820521	80874397	80820521	80874397	-	transcript2761.chr8.nic@ZNF704	transcript2761.chr8.nic	protein_coding	80873544,80820521	80874397,80821615	Gene ID= ENSG00000164684.13 TPM= 4.67 Transcript Type= NA
chr8	81280363	81284777	81280363	81284777	+	ENST00000297258.10@FABP5	ENST00000297258.10	protein_coding	81280363,81283366,81283873,81284514	81280674,81283538,81283974,81284777	Gene ID= ENSG00000164687.10 TPM= 93.41 Transcript Type= protein_coding
chr8	81280535	81284777	81280535	81284777	+	transcript2774.chr8.nic@FABP5	transcript2774.chr8.nic	protein_coding	81280535,81283873,81284514	81283538,81283974,81284777	Gene ID= ENSG00000164687.10 TPM= 8.17 Transcript Type= NA
chr8	81478419	81483263	81478419	81483263	-	ENST00000256104.4@FABP4	ENST00000256104.4	protein_coding	81483095,81480426,81479414,81478419	81483263,81480598,81479515,81478915	Gene ID= ENSG00000170323.8 TPM= 54.88 Transcript Type= protein_coding
chr8	81478689	81483237	81478689	81483237	-	transcript2777.chr8.nic@FABP4	transcript2777.chr8.nic	protein_coding	81480426,81479414,81478689	81483237,81479515,81478915	Gene ID= ENSG00000170323.8 TPM= 8.17 Transcript Type= NA
chr8	81478699	81483233	81478699	81483233	-	ENST00000522659.1@FABP4	ENST00000522659.1	protein_coding	81483099,81480426,81479414,81478699	81483233,81480598,81479515,81478915	Gene ID= ENSG00000170323.8 TPM= 54.88 Transcript Type= nonsense_mediated_decay
chr8	81657961	81686693	81657961	81686693	-	ENST00000256108.9@IMPA1	ENST00000256108.9	protein_coding	81686252,81681498,81680650,81679126,81676234,81673841,81670939,81660516,81657961	81686693,81681584,81680783,81679230,81676279,81673949,81671047,81660667,81659466	Gene ID= ENSG00000133731.9 TPM= 33.86 Transcript Type= protein_coding
chr8	81657961	81664024	81657961	81664024	-	transcript2788.chr8.nic@IMPA1	transcript2788.chr8.nic	protein_coding	81660516,81657961	81664024,81659466	Gene ID= ENSG00000133731.9 TPM= 2.34 Transcript Type= NA
chr8	81701722	81732418	81701722	81732418	-	transcript2806.chr8.nic@ZFAND1	transcript2806.chr8.nic	protein_coding	81732199,81718182,81714987,81714804,81713918,81702969,81701722	81732418,81718224,81715114,81714895,81714039,81703124,81702865	Gene ID= ENSG00000104231.10 TPM= 2.34 Transcript Type= NA
chr8	81701722	81721306	81701722	81721306	-	transcript2813.chr8.nic@ZFAND1	transcript2813.chr8.nic	protein_coding	81721227,81718182,81714804,81713918,81702969,81701722	81721306,81718224,81715114,81714039,81703124,81702865	Gene ID= ENSG00000104231.10 TPM= 2.34 Transcript Type= NA
chr8	81701723	81721300	81701723	81721300	-	ENST00000220669.9@ZFAND1	ENST00000220669.9	protein_coding	81721227,81718182,81717249,81714987,81714804,81713918,81702969,81701723	81721300,81718224,81717288,81715114,81714895,81714039,81703124,81702865	Gene ID= ENSG00000104231.10 TPM= 18.68 Transcript Type= protein_coding
chr8	81701765	81721289	81701765	81721289	-	ENST00000522520.5@ZFAND1	ENST00000522520.5	protein_coding	81721227,81718182,81714987,81714804,81713918,81702969,81701765	81721289,81718224,81715114,81714895,81714039,81703124,81702865	Gene ID= ENSG00000104231.10 TPM= 9.34 Transcript Type= protein_coding
chr8	81732434	81759515	81732434	81759515	+	ENST00000297265.4@CHMP4C	ENST00000297265.4	protein_coding	81732434,81753064,81755370,81758142,81758480	81732816,81753241,81755484,81758295,81759515	Gene ID= ENSG00000164695.4 TPM= 12.84 Transcript Type= protein_coding
chr8	85107147	85146076	85107147	85146076	+	ENST00000360375.7@LRRCC1	ENST00000360375.7	protein_coding	85107147,85109595,85110115,85112932,85115100,85115375,85123413,85124792,85126689,85129175,85129919,85131760,85134847,85135789,85137464,85138035,85138338,85141382,85145389	85107399,85109800,85110180,85113099,85115275,85115584,85123606,85124939,85126837,85129379,85130058,85131961,85135032,85135963,85137627,85138243,85138475,85141517,85146076	Gene ID= ENSG00000133739.15 TPM= 2.34 Transcript Type= protein_coding
chr8	85107116	85146076	85107116	85146076	+	transcript2833.chr8.nic@LRRCC1	transcript2833.chr8.nic	protein_coding	85107116,85110115,85112932,85115100,85115375,85123413,85124792,85126689,85129175,85129919,85131760,85134847,85135789,85137464,85138035,85138338,85141382,85145389	85107399,85110180,85113099,85115275,85115584,85123606,85124939,85126837,85129379,85130058,85131961,85135032,85135963,85137627,85138243,85138475,85141517,85146076	Gene ID= ENSG00000133739.15 TPM= 5.25 Transcript Type= NA
chr8	85107209	85146076	85107209	85146076	+	transcript2838.chr8.nnic@LRRCC1	transcript2838.chr8.nnic	protein_coding	85107209,85110115,85112932,85115100,85115375,85124792,85126689,85129175,85129919,85131760,85134847,85135789,85137464,85138035,85138338,85141382,85145389	85107399,85110180,85113099,85115275,85115584,85124939,85126837,85129379,85130058,85131961,85135032,85135963,85137627,85138243,85138475,85141517,85146076	Gene ID= ENSG00000133739.15 TPM= 2.34 Transcript Type= NA
chr8	85107209	85146076	85107209	85146076	+	transcript2843.chr8.nic@LRRCC1	transcript2843.chr8.nic	protein_coding	85107209,85110115,85112932,85124792,85126689,85129175,85129919,85131760,85134847,85135789,85137464,85138035,85138338,85141382,85145389	85107399,85110180,85113099,85124939,85126837,85129379,85130058,85131961,85135032,85135963,85137627,85138243,85138475,85141517,85146076	Gene ID= ENSG00000133739.15 TPM= 2.34 Transcript Type= NA
chr8	85177225	85214518	85177225	85214518	+	ENST00000418930.6@E2F5	ENST00000418930.6	protein_coding	85177225,85202147,85203094,85206177,85207425,85209142,85212160,85213753	85177654,85202256,85203255,85206220,85207489,85209409,85212204,85214518	Gene ID= ENSG00000133740.10 TPM= 4.67 Transcript Type= protein_coding
chr8	85177387	85214515	85177387	85214515	+	ENST00000416274.6@E2F5	ENST00000416274.6	protein_coding	85177387,85202147,85203094,85206177,85207425,85209142,85212157,85213753	85177654,85202256,85203255,85206220,85207489,85209409,85212204,85214515	Gene ID= ENSG00000133740.10 TPM= 1.17 Transcript Type= protein_coding
chr8	85214502	85220375	85214502	85220375	-	ENST00000612809.4@C8orf59	ENST00000612809.4	protein_coding	85220306,85219323,85217386,85214921,85214502	85220375,85219363,85217502,85215037,85214631	Gene ID= ENSG00000176731.11 TPM= 1.17 Transcript Type= protein_coding
chr8	85214502	85220372	85214502	85220372	-	transcript2850.chr8.nic@C8orf59	transcript2850.chr8.nic	protein_coding	85220306,85217386,85214921,85214502	85220372,85219363,85215037,85214631	Gene ID= ENSG00000176731.11 TPM= 2.34 Transcript Type= NA
chr8	85245527	85284073	85245527	85284073	+	ENST00000321764.3@CA13	ENST00000321764.3	protein_coding	85245527,85250740,85259421,85266608,85267902,85268472,85281230	85245865,85250937,85259539,85266703,85267964,85268627,85284073	Gene ID= ENSG00000185015.7 TPM= 3.5 Transcript Type= protein_coding
chr8	85254774	85257595	85254774	85257595	-	transcript2855.chr8.nnic@NA	transcript2855.chr8.nnic	NA	85254774	85257595	Gene ID= novel_gene_chr8_2856 TPM= 2.34 Transcript Type= NA
chr8	85438827	85449040	85438827	85449040	+	ENST00000285381.2@CA3	ENST00000285381.2	protein_coding	85438827,85439712,85442073,85444034,85445156,85446142,85448034	85438943,85439909,85442191,85444126,85445218,85446297,85449040	Gene ID= ENSG00000164879.6 TPM= 113.26 Transcript Type= protein_coding
chr8	85463852	85481493	85463852	85481493	+	ENST00000285379.9@CA2	ENST00000285379.9	protein_coding	85463852,85465272,85473693,85474324,85475798,85477120,85480670	85464115,85465469,85473811,85474416,85475860,85477275,85481493	Gene ID= ENSG00000104267.9 TPM= 134.27 Transcript Type= protein_coding
chr8	86098311	86154228	86098311	86154228	+	transcript2873.chr8.nnic@ATP6V0D2	transcript2873.chr8.nnic	protein_coding	86098311,86098989,86113709,86139457,86141450,86142877,86150112,86151466,86152816	86098477,86099108,86113880,86139635,86141529,86142954,86150288,86151540,86154228	Gene ID= ENSG00000147614.3 TPM= 2.92 Transcript Type= NA
chr8	86098837	86154228	86098837	86154228	+	ENST00000285393.3@ATP6V0D2	ENST00000285393.3	protein_coding	86098837,86113709,86139457,86141450,86142877,86150112,86151466,86152816	86099108,86113880,86139635,86141529,86142954,86150288,86151540,86154228	Gene ID= ENSG00000147614.3 TPM= 9.92 Transcript Type= protein_coding
chr8	86342673	86468249	86342673	86468249	+	transcript2895.chr8.nnic@WWP1	transcript2895.chr8.nnic	protein_coding	86342673,86374030,86380726,86381505,86398342,86398572,86402019,86411538,86425223,86427643,86430697,86431406,86431615,86435452,86435633,86438585,86442619,86448148,86448373,86452559,86457921,86461224,86461774,86466794	86342930,86374120,86380864,86381629,86398479,86398638,86402203,86411874,86425318,86427817,86430751,86431490,86431743,86435527,86435704,86438673,86442778,86448281,86448513,86452679,86458025,86461320,86461846,86468249	Gene ID= ENSG00000123124.13 TPM= 2.34 Transcript Type= NA
chr8	86472350	86508780	86472350	86508780	-	ENST00000406452.7@RMDN1	ENST00000406452.7	protein_coding	86508492,86506995,86488552,86486484,86484872,86480277,86478923,86477294,86474820,86472350	86508780,86507112,86488639,86486643,86484961,86480332,86479010,86477324,86474953,86474358	Gene ID= ENSG00000176623.11 TPM= 24.52 Transcript Type= protein_coding
chr8	86496487	86502304	86496487	86502304	+	transcript2917.chr8.nnic@NA	transcript2917.chr8.nnic	NA	86496487	86502304	Gene ID= novel_gene_chr8_2918 TPM= 2.34 Transcript Type= NA
chr8	86514422	86561411	86514422	86561411	+	transcript2921.chr8.nic@CPNE3	transcript2921.chr8.nic	protein_coding	86514422,86515462,86524877,86528536,86528945,86531155,86532509,86537563,86540245,86544740,86546595,86547711,86548301,86551046,86551183,86554851,86556102,86558288	86514541,86515499,86524997,86528677,86529124,86531229,86532580,86537646,86540334,86544838,86546681,86547770,86548434,86551100,86551234,86554984,86556338,86561411	Gene ID= ENSG00000085719.12 TPM= 3.89 Transcript Type= NA
chr8	86514427	86561498	86514427	86561498	+	ENST00000517490.5@CPNE3	ENST00000517490.5	protein_coding	86514427,86515462,86528536,86528945,86531155,86532509,86537563,86540245,86544740,86546595,86547711,86548301,86551046,86551183,86554851,86556102,86558288	86514541,86515499,86528677,86529124,86531229,86532580,86537646,86540334,86544838,86546681,86547770,86548434,86551100,86551234,86554984,86556338,86561498	Gene ID= ENSG00000085719.12 TPM= 37.36 Transcript Type= protein_coding
chr8	89757747	89791063	89757747	89791063	+	ENST00000220751.4@RIPK2	ENST00000220751.4	protein_coding	89757747,89762829,89765341,89769772,89771741,89772667,89780075,89784050,89786593,89789321,89790079	89758233,89762982,89765496,89769929,89771790,89772828,89780160,89784139,89786686,89789482,89791063	Gene ID= ENSG00000104312.7 TPM= 7.01 Transcript Type= protein_coding
chr8	89757806	89790608	89757806	89790608	+	ENST00000522965.1@RIPK2	ENST00000522965.1	protein_coding	89757806,89765341,89769772,89771741,89772667,89780075,89784050,89786593,89789321,89790079	89758233,89765496,89769929,89771790,89772828,89780160,89784139,89786686,89789482,89790608	Gene ID= ENSG00000104312.7 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr8	89900656	89902443	89900656	89902443	-	transcript2978.chr8.nnic@NA	transcript2978.chr8.nnic	NA	89900656	89902443	Gene ID= novel_gene_chr8_2979 TPM= 2.34 Transcript Type= NA
chr8	89902534	89927888	89902534	89927888	+	ENST00000451899.6@OSGIN2	ENST00000451899.6	protein_coding	89902534,89909567,89914077,89914555,89921080,89924503	89902837,89909721,89914213,89914746,89921171,89927888	Gene ID= ENSG00000164823.9 TPM= 14.01 Transcript Type= protein_coding
chr8	89933336	90003228	89933336	90003228	-	ENST00000396252.6@NBN	ENST00000396252.6	protein_coding	90003112,89984917,89984525,89982722,89981953,89981375,89980734,89978220,89971173,89970364,89964410,89958725,89955283,89953244,89947824,89946140,89943253,89937026,89933336	90003228,89984973,89984733,89982855,89982002,89981523,89980893,89978323,89971290,89970557,89964507,89958854,89955555,89953691,89947892,89946295,89943366,89937075,89935612	Gene ID= ENSG00000104320.13 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr8	89933336	89984716	89933336	89984716	-	ENST00000265433.7@NBN	ENST00000265433.7	protein_coding	89984525,89982722,89981375,89980734,89978220,89971173,89970364,89964410,89958725,89955283,89953244,89947824,89946140,89943253,89937026,89933336	89984716,89982855,89981523,89980893,89978323,89971290,89970557,89964507,89958854,89955555,89953691,89947892,89946295,89943366,89937075,89935612	Gene ID= ENSG00000104320.13 TPM= 2.34 Transcript Type= protein_coding
chr8	90001454	90051999	90001454	90051999	+	transcript3001.chr8.nnic@DECR1	transcript3001.chr8.nnic	protein_coding	90001454,90005448,90017124,90018909,90019086,90020909,90036841,90042728,90044849,90051677,90051838	90001561,90005845,90017326,90018966,90019172,90021056,90036940,90042800,90044995,90051739,90051999	Gene ID= ENSG00000104325.6 TPM= 2.72 Transcript Type= NA
chr8	90001405	90052008	90001405	90052008	+	ENST00000220764.6@DECR1	ENST00000220764.6	protein_coding	90001405,90017124,90018909,90019086,90020909,90036841,90042728,90044849,90051677,90051838	90001561,90017326,90018966,90019172,90021056,90036940,90042800,90044995,90051739,90052008	Gene ID= ENSG00000104325.6 TPM= 87.95 Transcript Type= protein_coding
chr8	90001477	90051999	90001477	90051999	+	ENST00000522161.5@DECR1	ENST00000522161.5	protein_coding	90001477,90005448,90006036,90017124,90018909,90019086,90020909,90036841,90042728,90044849,90051677,90051838	90001561,90005845,90006277,90017326,90018966,90019172,90021056,90036940,90042800,90044995,90051739,90051999	Gene ID= ENSG00000104325.6 TPM= 3.89 Transcript Type= protein_coding
chr8	90001476	90051972	90001476	90051972	+	ENST00000517597.5@DECR1	ENST00000517597.5	protein_coding	90001476,90018909,90019086,90020909,90036841,90042728,90044849,90051677,90051838	90001561,90018966,90019172,90021056,90036940,90042800,90044995,90051739,90051972	Gene ID= ENSG00000104325.6 TPM= 10.51 Transcript Type= nonsense_mediated_decay
chr8	90623542	90646079	90623542	90646079	-	transcript3015.chr8.nnic@TMEM64	transcript3015.chr8.nnic	protein_coding	90645591,90631552,90623542	90646079,90631707,90625862	Gene ID= ENSG00000180694.13 TPM= 3.5 Transcript Type= NA
chr8	90621995	90646083	90621995	90646083	-	ENST00000458549.6@TMEM64	ENST00000458549.6	protein_coding	90645111,90631552,90621995	90646083,90631707,90625862	Gene ID= ENSG00000180694.13 TPM= 26.85 Transcript Type= protein_coding
chr8	90642920	90646153	90642920	90646153	-	transcript3021.chr8.nnic@NA	transcript3021.chr8.nnic	NA	90642920	90646153	Gene ID= novel_gene_chr8_3022 TPM= 2.34 Transcript Type= NA
chr8	90993796	91041064	90993796	91041064	-	ENST00000285419.7@TMEM55A	ENST00000285419.7	protein_coding	91040644,91021256,91020157,91018390,91008743,90996654,90993796	91041064,91021404,91020263,91018513,91008795,90996744,90995820	Gene ID= ENSG00000155099.7 TPM= 1.17 Transcript Type= protein_coding
chr8	91059909	91070123	91059909	91070123	-	ENST00000522817.1@OTUD6B-AS1	ENST00000522817.1	antisense_RNA	91069931,91069579,91059909	91070123,91069822,91063746	Gene ID= ENSG00000253738.1 TPM= 2.34 Transcript Type= antisense_RNA
chr8	91067911	91070189	91067911	91070189	-	ENST00000524003.1@OTUD6B-AS1	ENST00000524003.1	antisense_RNA	91069931,91067911	91070189,91069822	Gene ID= ENSG00000253738.1 TPM= 23.35 Transcript Type= antisense_RNA
chr8	91070196	91087091	91070196	91087091	+	ENST00000615618.1@OTUD6B	ENST00000615618.1	protein_coding	91070196,91071138,91073831,91076592,91078356,91080669,91084008,91084784	91070466,91071289,91073911,91076731,91078668,91080730,91084114,91087091	Gene ID= ENSG00000155100.10 TPM= 2.34 Transcript Type= protein_coding
chr8	91070196	91087095	91070196	91087095	+	ENST00000285420.8@OTUD6B	ENST00000285420.8	protein_coding	91070196,91071138,91073831,91078356,91080669,91084008,91084784	91070466,91071289,91073911,91078668,91080730,91084114,91087095	Gene ID= ENSG00000155100.10 TPM= 16.35 Transcript Type= protein_coding
chr8	91071366	91076628	91071366	91076628	-	transcript3049.chr8.nnic@NA	transcript3049.chr8.nnic	NA	91071366	91076628	Gene ID= novel_gene_chr8_3050 TPM= 2.34 Transcript Type= NA
chr8	91958924	92095300	91958924	92095300	-	transcript3055.chr8.nic@RUNX1T1	transcript3055.chr8.nic	protein_coding	92095028,92075965,92017226,92014579,92011002,92005116,91991639,91986887,91986124,91975905,91970658,91958924	92095300,92076137,92017363,92014820,92011091,92005297,91991889,91986972,91986325,91975973,91970848,91960517	Gene ID= ENSG00000079102.16 TPM= 3.5 Transcript Type= NA
chr8	91958924	92062963	91958924	92062963	-	ENST00000396218.5@RUNX1T1	ENST00000396218.5	protein_coding	92062546,92017226,92014579,92011002,92005116,91991639,91986887,91986124,91975905,91970658,91958924	92062963,92017363,92014820,92011091,92005297,91991889,91986972,91986325,91975973,91970848,91960517	Gene ID= ENSG00000079102.16 TPM= 2.34 Transcript Type= protein_coding
chr8	92099168	92102906	92099168	92102906	+	transcript3061.chr8.nnic@NA	transcript3061.chr8.nnic	NA	92099168	92102906	Gene ID= novel_gene_chr8_3062 TPM= 2.34 Transcript Type= NA
chr8	92103495	92107969	92103495	92107969	+	transcript3063.chr8.nnic@NA	transcript3063.chr8.nnic	NA	92103495	92107969	Gene ID= novel_gene_chr8_3064 TPM= 3.5 Transcript Type= NA
chr8	92668850	92683440	92668850	92683440	+	transcript3066.chr8.nnic@AC104211.1	transcript3066.chr8.nnic	lincRNA	92668850,92678809,92681938	92668967,92679110,92683440	Gene ID= ENSG00000253177.1 TPM= 3.5 Transcript Type= NA
chr8	92883530	92966146	92883530	92966146	-	transcript3068.chr8.nic@TRIQK	transcript3068.chr8.nic	protein_coding	92966007,92954406,92921503,92916929,92891989,92883530	92966146,92954564,92921660,92917010,92892074,92886735	Gene ID= ENSG00000205133.11 TPM= 3.5 Transcript Type= NA
chr8	92883530	92966145	92883530	92966145	-	ENST00000521988.5@TRIQK	ENST00000521988.5	protein_coding	92966007,92954406,92916929,92891989,92883530	92966145,92954564,92917010,92892074,92886735	Gene ID= ENSG00000205133.11 TPM= 5.84 Transcript Type= protein_coding
chr8	92883532	92966144	92883532	92966144	-	ENST00000537541.1@TRIQK	ENST00000537541.1	protein_coding	92966007,92916929,92891989,92883532	92966144,92917010,92892074,92886735	Gene ID= ENSG00000205133.11 TPM= 1.17 Transcript Type= protein_coding
chr8	92883635	92966144	92883635	92966144	-	ENST00000518748.5@TRIQK	ENST00000518748.5	protein_coding	92966007,92954406,92916929,92891989,92883635	92966144,92954564,92917007,92892074,92886735	Gene ID= ENSG00000205133.11 TPM= 8.17 Transcript Type= protein_coding
chr8	93700507	93731527	93700507	93731527	+	ENST00000518322.5@FAM92A	ENST00000518322.5	protein_coding	93700507,93701224,93703620,93704909,93708011,93709771,93718675,93726394,93728205	93700673,93701458,93703688,93705010,93708016,93709875,93718788,93726513,93731527	Gene ID= ENSG00000188343.12 TPM= 5.84 Transcript Type= protein_coding
chr8	93700826	93729250	93700826	93729250	+	transcript3092.chr8.nic@FAM92A	transcript3092.chr8.nic	protein_coding	93700826,93701224,93703620,93704909,93708011,93709771,93718675,93726394,93728205	93701057,93701458,93703688,93705010,93708016,93709875,93718788,93726513,93729250	Gene ID= ENSG00000188343.12 TPM= 3.5 Transcript Type= NA
chr8	93729356	93741017	93729356	93741017	-	ENST00000399300.6@RBM12B	ENST00000399300.6	protein_coding	93740881,93737307,93729356	93741017,93737355,93736438	Gene ID= ENSG00000183808.11 TPM= 3.5 Transcript Type= protein_coding
chr8	93754857	93818057	93754857	93818057	+	ENST00000453321.7@TMEM67	ENST00000453321.7	protein_coding	93754857,93755778,93758483,93763842,93765406,93765572,93772589,93780593,93780874,93781658,93782395,93785222,93786223,93787844,93791263,93793198,93795409,93795901,93797134,93797331,93799618,93803604,93804762,93808840,93809057,93809785,93815305,93816372	93755137,93755866,93758576,93763941,93765475,93765646,93772651,93780747,93780982,93781744,93782460,93785378,93786346,93787949,93791319,93793296,93795507,93795987,93797233,93797470,93799758,93803684,93804878,93808956,93809161,93809887,93815447,93818057	Gene ID= ENSG00000164953.15 TPM= 2.34 Transcript Type= protein_coding
chr8	93754906	93759480	93754906	93759480	+	ENST00000475305.1@TMEM67	ENST00000475305.1	protein_coding	93754906,93755778,93758483	93755137,93755866,93759480	Gene ID= ENSG00000164953.15 TPM= 1.17 Transcript Type= retained_intron
chr8	93916947	93926066	93916947	93926066	+	ENST00000396200.3@PDP1	ENST00000396200.3	protein_coding	93916947,93917911,93922016	93917218,93917945,93926066	Gene ID= ENSG00000164951.15 TPM= 1.75 Transcript Type= protein_coding
chr8	93916855	93926062	93916855	93926062	+	ENST00000297598.4@PDP1	ENST00000297598.4	protein_coding	93916855,93922016	93917079,93926062	Gene ID= ENSG00000164951.15 TPM= 72.97 Transcript Type= protein_coding
chr8	94249253	94262350	94249253	94262350	-	ENST00000396194.6@GEM	ENST00000396194.6	protein_coding	94262205,94260173,94253036,94252019,94249253	94262350,94260512,94253112,94252223,94250587	Gene ID= ENSG00000164949.7 TPM= 10.51 Transcript Type= protein_coding
chr8	94249258	94262345	94249258	94262345	-	ENST00000297596.2@GEM	ENST00000297596.2	protein_coding	94262090,94260173,94253036,94252019,94249258	94262345,94260512,94253112,94252223,94250587	Gene ID= ENSG00000164949.7 TPM= 14.01 Transcript Type= protein_coding
chr8	94371960	94475109	94371960	94475109	-	ENST00000336148.9@RAD54B	ENST00000336148.9	protein_coding	94475001,94467405,94458268,94411121,94407439,94404077,94400238,94399414,94393743,94391609,94386984,94380145,94378568,94378180,94371960	94475109,94467555,94458436,94411315,94407720,94404239,94400463,94399621,94393882,94391899,94387159,94380406,94378634,94378380,94372387	Gene ID= ENSG00000197275.13 TPM= 2.34 Transcript Type= protein_coding
chr8	94487693	94553523	94487693	94553523	-	ENST00000297591.9@VIRMA	ENST00000297591.9	protein_coding	94553385,94543827,94538260,94537103,94534839,94530963,94529070,94526223,94518985,94517788,94514869,94511996,94511185,94510417,94509688,94506500,94499374,94496328,94495731,94494860,94492652,94491578,94489939,94487693	94553523,94543942,94538346,94537151,94535007,94531085,94529342,94527363,94519476,94517942,94514951,94512089,94511729,94510652,94509940,94506717,94499506,94496480,94495891,94494956,94492818,94491909,94490082,94488860	Gene ID= ENSG00000164944.11 TPM= 1.75 Transcript Type= protein_coding
chr8	94510733	94553529	94510733	94553529	-	ENST00000421249.2@VIRMA	ENST00000421249.2	protein_coding	94553385,94543827,94538260,94537103,94534839,94530963,94529070,94526223,94518985,94517788,94514869,94511996,94510733	94553529,94543942,94538346,94537151,94535007,94531085,94529342,94527363,94519476,94517942,94514951,94512089,94511729	Gene ID= ENSG00000164944.11 TPM= 2.92 Transcript Type= protein_coding
chr8	94641024	94707466	94641024	94707466	+	transcript3138.chr8.nic@ESRP1	transcript3138.chr8.nic	protein_coding	94641024,94641956,94643303,94646168,94662272,94662501,94664697,94664927,94665154,94667949,94671453,94674308,94678203,94692677,94705925	94641450,94642084,94643416,94646282,94662370,94662555,94664807,94665059,94665196,94668250,94671671,94674506,94678371,94692827,94707466	Gene ID= ENSG00000104413.15 TPM= 3.5 Transcript Type= NA
chr8	94641074	94669896	94641074	94669896	+	transcript3147.chr8.nic@ESRP1	transcript3147.chr8.nic	protein_coding	94641074,94641956,94643303,94646168,94662272,94662501,94664697,94664927,94665154,94667949	94641450,94642084,94643416,94646282,94662370,94662555,94664807,94665059,94665196,94669896	Gene ID= ENSG00000104413.15 TPM= 4.67 Transcript Type= NA
chr8	94641074	94707466	94641074	94707466	+	ENST00000423620.6@ESRP1	ENST00000423620.6	protein_coding	94641074,94641956,94643303,94646168,94662272,94662501,94664697,94664927,94665154,94667949,94671453,94674308,94678203,94692677,94705925	94641450,94642084,94643416,94646282,94662370,94662555,94664807,94665059,94665196,94668250,94671671,94674494,94678371,94692827,94707466	Gene ID= ENSG00000104413.15 TPM= 3.5 Transcript Type= protein_coding
chr8	94641129	94707423	94641129	94707423	+	ENST00000433389.6@ESRP1	ENST00000433389.6	protein_coding	94641129,94641956,94643303,94646168,94662272,94662501,94664697,94664927,94665154,94667949,94671453,94674308,94678203,94692677,94696852,94705925	94641450,94642084,94643416,94646282,94662370,94662555,94664807,94665059,94665196,94668250,94671671,94674506,94678371,94692827,94696961,94707423	Gene ID= ENSG00000104413.15 TPM= 11.68 Transcript Type= protein_coding
chr8	94641174	94707466	94641174	94707466	+	ENST00000358397.9@ESRP1	ENST00000358397.9	protein_coding	94641174,94641956,94643303,94646168,94662272,94662501,94664697,94664927,94665154,94667949,94671453,94674308,94678203,94692677,94696852,94705925	94641450,94642084,94643416,94646282,94662370,94662555,94664807,94665059,94665196,94668250,94671671,94674494,94678371,94692827,94696961,94707466	Gene ID= ENSG00000104413.15 TPM= 3.5 Transcript Type= protein_coding
chr8	94641199	94707466	94641199	94707466	+	ENST00000454170.6@ESRP1	ENST00000454170.6	protein_coding	94641199,94641956,94643303,94646168,94662272,94662501,94664697,94664927,94665154,94667949,94671453,94674308,94678203,94705925	94641450,94642084,94643416,94646282,94662370,94662555,94664807,94665059,94665196,94668250,94671671,94674506,94678371,94707466	Gene ID= ENSG00000104413.15 TPM= 4.67 Transcript Type= protein_coding
chr8	94719900	94793836	94719900	94793836	+	ENST00000414645.6@DPY19L4	ENST00000414645.6	protein_coding	94719900,94726331,94734630,94738369,94739413,94739645,94756036,94761700,94765183,94765711,94766612,94768395,94770452,94777666,94780359,94781084,94783670,94787894,94789746	94720014,94726441,94734754,94738459,94739534,94739790,94756159,94761834,94765314,94765809,94766685,94768553,94770571,94777786,94780415,94781166,94783802,94788052,94793836	Gene ID= ENSG00000156162.16 TPM= 1.17 Transcript Type= protein_coding
chr8	94823277	94880314	94823277	94880314	+	transcript3176.chr8.nic@INTS8	transcript3176.chr8.nic	protein_coding	94823277,94827263,94827722,94828975,94831992,94836524,94838463,94841491,94842347,94849462,94849916,94851553,94853805,94856777,94859511,94865506,94866158,94867140,94867276,94871884,94873374,94874552,94876074,94876221,94876446,94880118	94823561,94827403,94827793,94829026,94832174,94836631,94838618,94841591,94842488,94849532,94850091,94851686,94853915,94856978,94859632,94865690,94866191,94867196,94867337,94872002,94873477,94874602,94876147,94876285,94876489,94880314	Gene ID= ENSG00000164941.13 TPM= 7.59 Transcript Type= NA
chr8	94823255	94880314	94823255	94880314	+	transcript3179.chr8.nnic@INTS8	transcript3179.chr8.nnic	protein_coding	94823255,94824893,94827263,94827722,94828975,94831992,94841491,94842347,94849462,94849916,94851553,94853805,94856777,94859511,94865506,94866158,94867140,94867276,94871884,94873374,94874552,94876074,94876221,94876446,94880118	94823561,94825067,94827403,94827793,94829026,94832174,94841591,94842488,94849532,94850091,94851686,94853915,94856978,94859632,94865690,94866191,94867196,94867337,94872002,94873477,94874602,94876147,94876285,94876489,94880314	Gene ID= ENSG00000164941.13 TPM= 4.09 Transcript Type= NA
chr8	94880227	94895254	94880227	94895254	-	ENST00000308108.8@CCNE2	ENST00000308108.8	protein_coding	94895177,94894208,94894023,94893891,94892818,94890415,94887927,94885463,94885067,94882781,94882132,94880227	94895254,94894247,94894119,94893944,94892969,94890550,94888073,94885558,94885201,94882892,94882289,94881745	Gene ID= ENSG00000175305.17 TPM= 5.84 Transcript Type= protein_coding
chr8	94925972	94949411	94925972	94949411	-	ENST00000342697.4@TP53INP1	ENST00000342697.4	protein_coding	94949154,94940830,94939860,94925972	94949411,94941091,94940220,94930728	Gene ID= ENSG00000164938.13 TPM= 40.87 Transcript Type= protein_coding
chr8	94925972	94949366	94925972	94949366	-	ENST00000448464.6@TP53INP1	ENST00000448464.6	protein_coding	94949154,94940830,94939860,94932070,94925972	94949366,94941091,94940220,94932107,94930728	Gene ID= ENSG00000164938.13 TPM= 46.7 Transcript Type= protein_coding
chr8	94943065	94946718	94943065	94946718	+	transcript3191.chr8.nnic@NA	transcript3191.chr8.nnic	NA	94943065	94946718	Gene ID= novel_gene_chr8_3192 TPM= 7.01 Transcript Type= NA
chr8	95024986	95058710	95024986	95058710	+	ENST00000396124.8@NDUFAF6	ENST00000396124.8	protein_coding	95024986,95031995,95035454,95041570,95045545,95046994,95048457,95052174,95057809	95025205,95032094,95035576,95041626,95045647,95047127,95048558,95052230,95058710	Gene ID= ENSG00000156170.12 TPM= 9.34 Transcript Type= protein_coding
chr8	95133804	95156684	95133804	95156684	+	ENST00000315367.3@PLEKHF2	ENST00000315367.3	protein_coding	95133804,95154031	95134030,95156684	Gene ID= ENSG00000175895.3 TPM= 61.88 Transcript Type= protein_coding
chr8	96225920	96235634	96225920	96235634	-	ENST00000287022.9@UQCRB	ENST00000287022.9	protein_coding	96235512,96233156,96231774,96225920	96235634,96233227,96231940,96231132	Gene ID= ENSG00000156467.9 TPM= 4.67 Transcript Type= protein_coding
chr8	96239424	96261603	96239424	96261603	-	transcript3215.chr8.nic@MTERF3	transcript3215.chr8.nic	protein_coding	96261501,96260137,96258357,96256962,96250906,96246307,96245860,96243919,96239424	96261603,96260247,96258700,96257114,96251095,96246454,96245931,96244080,96239685	Gene ID= ENSG00000156469.8 TPM= 2.34 Transcript Type= NA
chr8	96239435	96261589	96239435	96261589	-	ENST00000287025.3@MTERF3	ENST00000287025.3	protein_coding	96261501,96258357,96256962,96250906,96246307,96245860,96243919,96239435	96261589,96258700,96257114,96251095,96246454,96245931,96244080,96239685	Gene ID= ENSG00000156469.8 TPM= 24.52 Transcript Type= protein_coding
chr8	96261715	96336995	96261715	96336995	+	ENST00000517309.5@PTDSS1	ENST00000517309.5	protein_coding	96261715,96273299,96284109,96287022,96295098,96299694,96304040,96306444,96309557,96320246,96330213,96331026,96333457	96262219,96273390,96284153,96287146,96295256,96299845,96304181,96306556,96309622,96320345,96330281,96331095,96336995	Gene ID= ENSG00000156471.12 TPM= 218.34 Transcript Type= protein_coding
chr8	96493351	96611780	96493351	96611780	+	ENST00000302190.8@SDC2	ENST00000302190.8	protein_coding	96493351,96593480,96602395,96608335,96609385	96494331,96593591,96602528,96608470,96611780	Gene ID= ENSG00000169439.11 TPM= 39.7 Transcript Type= protein_coding
chr8	96645227	97143501	96645227	97143501	+	ENST00000220763.9@CPQ	ENST00000220763.9	protein_coding	96645227,96784864,96834973,96879798,96965935,97029403,97066009,97143020	96645402,96785330,96835180,96880005,96966046,97029494,97066210,97143501	Gene ID= ENSG00000104324.15 TPM= 57.21 Transcript Type= protein_coding
chr8	97031190	97034693	97031190	97034693	-	transcript3249.chr8.nnic@NA	transcript3249.chr8.nnic	NA	97031190	97034693	Gene ID= novel_gene_chr8_3250 TPM= 3.5 Transcript Type= NA
chr8	97273474	97277964	97273474	97277964	-	ENST00000322128.4@TSPYL5	ENST00000322128.4	protein_coding	97273474	97277964	Gene ID= ENSG00000180543.4 TPM= 25.69 Transcript Type= protein_coding
chr8	97644032	97713735	97644032	97713735	+	transcript3273.chr8.nic@MTDH	transcript3273.chr8.nic	protein_coding	97644032,97661072,97686668,97687429,97689038,97690952,97699754,97706626,97713662	97644887,97661173,97686752,97687605,97689103,97691188,97699852,97706750,97713735	Gene ID= ENSG00000147649.9 TPM= 51.37 Transcript Type= NA
chr8	97644133	97713735	97644133	97713735	+	transcript3274.chr8.nic@MTDH	transcript3274.chr8.nic	protein_coding	97644133,97661072,97686668,97687429,97689038,97690952,97706626,97713662	97644887,97661173,97686752,97687605,97689103,97691188,97706750,97713735	Gene ID= ENSG00000147649.9 TPM= 9.34 Transcript Type= NA
chr8	97644179	97728770	97644179	97728770	+	ENST00000336273.7@MTDH	ENST00000336273.7	protein_coding	97644179,97661072,97686668,97687429,97689038,97690952,97699754,97706626,97713662,97719049,97722879,97724600	97644887,97661173,97686752,97687605,97689103,97691188,97699852,97706750,97713769,97719189,97723035,97728770	Gene ID= ENSG00000147649.9 TPM= 7.01 Transcript Type= protein_coding
chr8	97644155	97647963	97644155	97647963	+	transcript3281.chr8.nnic@NA	transcript3281.chr8.nnic	NA	97644155	97647963	Gene ID= novel_gene_chr8_3282 TPM= 7.01 Transcript Type= NA
chr8	97678596	97682694	97678596	97682694	-	transcript3285.chr8.nnic@NA	transcript3285.chr8.nnic	NA	97678596	97682694	Gene ID= novel_gene_chr8_3286 TPM= 4.67 Transcript Type= NA
chr8	97869085	98036158	97869085	98036158	+	transcript3304.chr8.nic@MATN2	transcript3304.chr8.nic	protein_coding	97869085,97888075,97930953,97941777,97961408,97978886,98003661,98007105,98007479,98016540,98017994,98021205,98027416,98030462,98032246,98033099,98033561,98035657	97869287,97888242,97931522,97941899,97961530,97979008,98003783,98007227,98007601,98016662,98018116,98021327,98027829,98030614,98032317,98033176,98033659,98036158	Gene ID= ENSG00000132561.13 TPM= 2.34 Transcript Type= NA
chr8	97868840	98035978	97868840	98035978	+	ENST00000521689.5@MATN2	ENST00000521689.5	protein_coding	97868840,97888075,97930953,97941777,97961408,97978886,97994480,98003661,98007105,98007479,98016540,98017994,98021205,98027416,98030462,98032246,98033099,98033561,98035657	97869287,97888242,97931522,97941899,97961530,97979008,97994602,98003783,98007227,98007601,98016662,98018116,98021327,98027829,98030614,98032317,98033176,98033659,98035978	Gene ID= ENSG00000132561.13 TPM= 1.17 Transcript Type= protein_coding
chr8	97869113	98004286	97869113	98004286	+	ENST00000523490.1@MATN2	ENST00000523490.1	protein_coding	97869113,97888075,97930953,97941777,97961408,97978886,97994480,98003661	97869287,97888242,97931522,97941899,97961530,97979008,97994602,98004286	Gene ID= ENSG00000132561.13 TPM= 2.34 Transcript Type= retained_intron
chr8	98041721	98045590	98041721	98045590	-	ENST00000287038.7@RPL30	ENST00000287038.7	protein_coding	98045508,98045347,98044943,98042645,98041721	98045590,98045399,98045088,98042775,98041850	Gene ID= ENSG00000156482.10 TPM= 304.94 Transcript Type= protein_coding
chr8	98041721	98045544	98041721	98045544	-	ENST00000396070.6@RPL30	ENST00000396070.6	protein_coding	98045508,98045347,98044943,98042645,98041721	98045544,98045399,98045088,98042718,98041850	Gene ID= ENSG00000156482.10 TPM= 7.79 Transcript Type= protein_coding
chr8	98041721	98045514	98041721	98045514	-	ENST00000521291.5@RPL30	ENST00000521291.5	protein_coding	98045347,98044943,98042645,98041721	98045514,98045088,98042775,98041850	Gene ID= ENSG00000156482.10 TPM= 13.04 Transcript Type= protein_coding
chr8	98102344	98117241	98102344	98117241	-	ENST00000254878.7@RIDA	ENST00000254878.7	protein_coding	98117032,98108646,98106272,98105938,98104489,98102344	98117241,98108751,98106326,98106006,98104544,98102904	Gene ID= ENSG00000132541.10 TPM= 14.01 Transcript Type= protein_coding
chr8	98117312	98159834	98117312	98159834	+	ENST00000401707.6@POP1	ENST00000401707.6	protein_coding	98117312,98123336,98127595,98128365,98129978,98133949,98134472,98136482,98136861,98140078,98140769,98146568,98148815,98150485,98156050,98157617	98117390,98123479,98127762,98128540,98130226,98134036,98134659,98136738,98136954,98140189,98140888,98146683,98149006,98150639,98156412,98159834	Gene ID= ENSG00000104356.10 TPM= 7.01 Transcript Type= protein_coding
chr8	98454633	98825681	98454633	98825681	-	ENST00000419617.6@STK3	ENST00000419617.6	protein_coding	98825515,98774739,98767243,98749276,98707147,98706467,98596032,98579664,98547969,98526742,98454633	98825681,98774819,98767371,98749390,98707311,98706634,98596169,98579789,98548161,98526917,98456000	Gene ID= ENSG00000104375.15 TPM= 51.37 Transcript Type= protein_coding
chr8	98681957	98690463	98681957	98690463	+	transcript3343.chr8.nnic@NA	transcript3343.chr8.nnic	NA	98681957	98690463	Gene ID= novel_gene_chr8_3344 TPM= 5.84 Transcript Type= NA
chr8	98944458	98952100	98944458	98952100	+	ENST00000435298.6@OSR2	ENST00000435298.6	protein_coding	98944458,98948839,98950656,98951601	98944823,98949608,98950755,98952100	Gene ID= ENSG00000164920.9 TPM= 2.34 Transcript Type= protein_coding
chr8	99853585	99877580	99853585	99877580	+	transcript3357.chr8.nic@VPS13B	transcript3357.chr8.nic	protein_coding	99853585,99859304,99861776,99868289,99870785,99871448,99875418	99854256,99859480,99861946,99868465,99870887,99871697,99877580	Gene ID= ENSG00000132549.18 TPM= 2.92 Transcript Type= NA
chr8	99853585	99877580	99853585	99877580	+	transcript3358.chr8.nic@VPS13B	transcript3358.chr8.nic	protein_coding	99853585,99859304,99861776,99868289,99870785,99875418	99854256,99859480,99861946,99868465,99871697,99877580	Gene ID= ENSG00000132549.18 TPM= 2.92 Transcript Type= NA
chr8	99877866	99894062	99877866	99894062	-	ENST00000520468.6@COX6C	ENST00000520468.6	protein_coding	99893639,99891908,99887490,99877866	99894062,99892052,99887618,99878265	Gene ID= ENSG00000164919.10 TPM= 91.07 Transcript Type= protein_coding
chr8	99878149	99893679	99878149	99893679	-	transcript3362.chr8.nnic@COX6C	transcript3362.chr8.nnic	protein_coding	99893639,99887490,99878149	99893679,99887618,99878265	Gene ID= ENSG00000164919.10 TPM= 3.5 Transcript Type= NA
chr8	99878149	99893622	99878149	99893622	-	ENST00000520271.5@COX6C	ENST00000520271.5	protein_coding	99893443,99891908,99887490,99878149	99893622,99892052,99887618,99878265	Gene ID= ENSG00000164919.10 TPM= 4.67 Transcript Type= protein_coding
chr8	100150584	100154002	100150584	100154002	+	ENST00000353107.7@POLR2K	ENST00000353107.7	protein_coding	100150584,100151347,100151824,100153294	100150709,100151416,100151916,100154002	Gene ID= ENSG00000147669.10 TPM= 49.04 Transcript Type= protein_coding
chr8	100150661	100153997	100150661	100153997	+	transcript3366.chr8.nnic@NA	transcript3366.chr8.nnic	NA	100150661	100153997	Gene ID= novel_gene_chr8_3367 TPM= 2.34 Transcript Type= NA
chr8	100158035	100241903	100158035	100241903	+	ENST00000251809.4@SPAG1	ENST00000251809.4	protein_coding	100158035,100162279,100165814,100177816,100183375,100183956,100184628,100187120,100191390,100194112,100213090,100213819,100220279,100225173,100231156,100233411,100239240,100240403,100240891	100158118,100162420,100165973,100177941,100183436,100184062,100184733,100187250,100191496,100194268,100213428,100213918,100220431,100225339,100231288,100233537,100239404,100240771,100241903	Gene ID= ENSG00000104450.12 TPM= 3.21 Transcript Type= protein_coding
chr8	100212994	100241902	100212994	100241902	+	transcript3380.chr8.nic@SPAG1	transcript3380.chr8.nic	protein_coding	100212994,100213819,100220279,100225173,100231156,100233411,100239240,100240403,100240891	100213428,100213918,100220431,100225339,100231288,100233537,100239404,100240771,100241902	Gene ID= ENSG00000104450.12 TPM= 3.21 Transcript Type= NA
chr8	100212994	100241902	100212994	100241902	+	transcript3386.chr8.nnic@SPAG1	transcript3386.chr8.nnic	protein_coding	100212994,100213819,100220279,100225173,100231156,100233411,100240403,100240891	100213428,100213918,100220431,100225339,100231288,100233537,100240771,100241902	Gene ID= ENSG00000104450.12 TPM= 3.79 Transcript Type= NA
chr8	100213009	100241902	100213009	100241902	+	transcript3388.chr8.nnic@SPAG1	transcript3388.chr8.nnic	protein_coding	100213009,100220279,100225173,100231156,100233411,100239240,100240403,100240891	100213428,100220431,100225339,100231288,100233537,100239404,100240771,100241902	Gene ID= ENSG00000104450.12 TPM= 4.96 Transcript Type= NA
chr8	100254575	100256522	100254575	100256522	+	transcript3398.chr8.nnic@NA	transcript3398.chr8.nnic	NA	100254575	100256522	Gene ID= novel_gene_chr8_3399 TPM= 3.5 Transcript Type= NA
chr8	100257342	100310327	100257342	100310327	-	ENST00000341084.6@RNF19A	ENST00000341084.6	protein_coding	100309867,100287501,100274953,100269869,100268785,100264671,100264034,100261542,100259854,100257342	100310327,100288267,100275161,100270013,100268947,100264785,100264195,100261755,100259997,100259246	Gene ID= ENSG00000034677.12 TPM= 8.17 Transcript Type= protein_coding
chr8	100257060	100309968	100257060	100309968	-	transcript3381.chr8.nnic@RNF19A	transcript3381.chr8.nnic	protein_coding	100309867,100274953,100269869,100268785,100264671,100264034,100261542,100259854,100257060	100309968,100275161,100270013,100268947,100264785,100264195,100261755,100259997,100259246	Gene ID= ENSG00000034677.12 TPM= 3.5 Transcript Type= NA
chr8	100520772	100559784	100520772	100559784	-	ENST00000519597.5@ANKRD46	ENST00000519597.5	protein_coding	100559711,100533209,100532356,100529523,100527845,100520772	100559784,100533311,100532460,100529860,100528003,100522771	Gene ID= ENSG00000186106.11 TPM= 2.92 Transcript Type= protein_coding
chr8	100520776	100559727	100520776	100559727	-	transcript3404.chr8.nic@ANKRD46	transcript3404.chr8.nic	protein_coding	100559532,100533209,100529523,100527845,100520776	100559727,100533311,100529860,100528003,100522771	Gene ID= ENSG00000186106.11 TPM= 2.92 Transcript Type= NA
chr8	100520772	100559759	100520772	100559759	-	ENST00000335659.7@ANKRD46	ENST00000335659.7	protein_coding	100559711,100533209,100529523,100527845,100520772	100559759,100533311,100529860,100528003,100522771	Gene ID= ENSG00000186106.11 TPM= 22.77 Transcript Type= protein_coding
chr8	100520776	100559711	100520776	100559711	-	ENST00000520311.5@ANKRD46	ENST00000520311.5	protein_coding	100559038,100533209,100529523,100527845,100520776	100559711,100533311,100529860,100528003,100522771	Gene ID= ENSG00000186106.11 TPM= 1.75 Transcript Type= protein_coding
chr8	100702916	100722712	100702916	100722712	-	ENST00000318607.9@PABPC1	ENST00000318607.9	protein_coding	100721391,100718087,100717773,100715462,100713087,100712652,100712362,100709459,100709133,100706887,100706651,100705589,100704926,100704297,100702916	100722712,100718280,100717888,100715601,100713181,100712789,100712457,100709731,100709223,100706997,100706805,100705673,100705056,100704390,100703359	Gene ID= ENSG00000070756.15 TPM= 556.07 Transcript Type= protein_coding
chr8	100915158	100919880	100915158	100919880	+	transcript3454.chr8.nnic@NA	transcript3454.chr8.nnic	NA	100915158	100919880	Gene ID= novel_gene_chr8_3455 TPM= 11.68 Transcript Type= NA
chr8	100918683	100951449	100918683	100951449	-	ENST00000395956.7@YWHAZ	ENST00000395956.7	protein_coding	100951235,100948596,100924916,100924135,100923955,100918683	100951449,100948900,100925039,100924298,100924050,100920752	Gene ID= ENSG00000164924.17 TPM= 9.92 Transcript Type= protein_coding
chr8	100918577	100952129	100918577	100952129	-	ENST00000395958.5@YWHAZ	ENST00000395958.5	protein_coding	100951929,100948596,100924916,100924135,100923955,100918577	100952129,100948900,100925039,100924298,100924050,100920752	Gene ID= ENSG00000164924.17 TPM= 138.94 Transcript Type= protein_coding
chr8	100918579	100952993	100918579	100952993	-	ENST00000457309.2@YWHAZ	ENST00000457309.2	protein_coding	100952850,100948596,100924916,100924135,100923955,100918579	100952993,100948900,100925039,100924298,100924050,100920752	Gene ID= ENSG00000164924.17 TPM= 15.18 Transcript Type= protein_coding
chr8	100918686	100953341	100918686	100953341	-	ENST00000353245.7@YWHAZ	ENST00000353245.7	protein_coding	100953269,100948596,100924916,100924135,100923955,100918686	100953341,100948900,100925039,100924298,100924050,100920752	Gene ID= ENSG00000164924.17 TPM= 77.64 Transcript Type= protein_coding
chr8	100936563	100940077	100936563	100940077	+	transcript3456.chr8.nnic@NA	transcript3456.chr8.nnic	NA	100936563	100940077	Gene ID= novel_gene_chr8_3457 TPM= 4.67 Transcript Type= NA
chr8	101174114	101205667	101174114	101205667	-	transcript3460.chr8.nic@ZNF706	transcript3460.chr8.nic	protein_coding	101205435,101201607,101199990,101199195,101174114	101205667,101201743,101200097,101199239,101178387	Gene ID= ENSG00000120963.11 TPM= 3.5 Transcript Type= NA
chr8	101198939	101205732	101198939	101205732	-	ENST00000519882.5@ZNF706	ENST00000519882.5	protein_coding	101205435,101202333,101201607,101199990,101198939	101205732,101202447,101201743,101200097,101199239	Gene ID= ENSG00000120963.11 TPM= 3.5 Transcript Type= protein_coding
chr8	101198933	101204701	101198933	101204701	-	ENST00000517844.5@ZNF706	ENST00000517844.5	protein_coding	101204650,101201607,101199990,101198933	101204701,101201743,101200097,101199239	Gene ID= ENSG00000120963.11 TPM= 1.17 Transcript Type= protein_coding
chr8	101197052	101205616	101197052	101205616	-	ENST00000311212.8@ZNF706	ENST00000311212.8	protein_coding	101205435,101201607,101199990,101197052	101205616,101201743,101200097,101199239	Gene ID= ENSG00000120963.11 TPM= 9.34 Transcript Type= protein_coding
chr8	101491243	101492709	101491243	101492709	-	transcript3475.chr8.nnic@NA	transcript3475.chr8.nnic	NA	101491243	101492709	Gene ID= novel_gene_chr8_3476 TPM= 2.34 Transcript Type= NA
chr8	101492432	101669726	101492432	101669726	+	ENST00000251808.7@GRHL2	ENST00000251808.7	protein_coding	101492432,101543241,101552715,101558419,101570339,101573668,101577408,101599057,101619539,101631637,101632226,101636897,101644131,101649414,101664454,101666589	101492789,101543436,101552782,101558812,101570394,101573824,101577519,101599151,101619697,101631724,101632365,101636928,101644225,101649499,101664518,101669726	Gene ID= ENSG00000083307.10 TPM= 21.02 Transcript Type= protein_coding
chr8	101686727	102124273	101686727	102124273	-	transcript3477.chr8.nnic@NCALD	transcript3477.chr8.nnic	protein_coding	102124237,102069989,102020237,101915809,101887141,101719252,101692791,101686727	102124273,102070106,102020289,101915858,101887227,101719648,101692896,101689406	Gene ID= ENSG00000104490.17 TPM= 3.5 Transcript Type= NA
chr8	101686543	102124334	101686543	102124334	-	ENST00000311028.4@NCALD	ENST00000311028.4	protein_coding	102124237,102020237,101915809,101887141,101719252,101692791,101686543	102124334,102020289,101915858,101887227,101719648,101692896,101689406	Gene ID= ENSG00000104490.17 TPM= 4.67 Transcript Type= protein_coding
chr8	101686543	102124298	101686543	102124298	-	transcript3483.chr8.nic@NCALD	transcript3483.chr8.nic	protein_coding	102124237,102020237,101915809,101719252,101692791,101686543	102124298,102020289,101915858,101719648,101692896,101689406	Gene ID= ENSG00000104490.17 TPM= 4.67 Transcript Type= NA
chr8	101686727	101790961	101686727	101790961	-	ENST00000220931.10@NCALD	ENST00000220931.10	protein_coding	101790862,101719252,101692791,101686727	101790961,101719648,101692896,101689406	Gene ID= ENSG00000104490.17 TPM= 2.34 Transcript Type= protein_coding
chr8	102204502	102239118	102204502	102239118	-	ENST00000251810.7@RRM2B	ENST00000251810.7	protein_coding	102238827,102232149,102225918,102224885,102224046,102218814,102214054,102212776,102204502	102239118,102232304,102226034,102225018,102224140,102218947,102214158,102212889,102208285	Gene ID= ENSG00000048392.11 TPM= 44.95 Transcript Type= protein_coding
chr8	102253012	102412841	102253012	102412841	-	ENST00000520539.5@UBR5	ENST00000520539.5	protein_coding	102412173,102361582,102361125,102360589,102360071,102346903,102346236,102345396,102342473,102329283,102329090,102327742,102326546,102323311,102314744,102313804,102312342,102312134,102311735,102311299,102305085,102304043,102300000,102299452,102298848,102298392,102297458,102296893,102295636,102295414,102295204,102294982,102293955,102293605,102289453,102288155,102287433,102286360,102285513,102285127,102281289,102280394,102279036,102278826,102276972,102275708,102275521,102272529,102271134,102270039,102268978,102266947,102265100,102264474,102261915,102261146,102258985,102257632,102253012	102412841,102361626,102361206,102360665,102360190,102347092,102346395,102345545,102342684,102329399,102329200,102327896,102326663,102323495,102314853,102313916,102312485,102312245,102311889,102311496,102305295,102304169,102300151,102299547,102298971,102298489,102297606,102296984,102295782,102295532,102295330,102295111,102294115,102293844,102289576,102288266,102287564,102286617,102285781,102285338,102281519,102280467,102279208,102278939,102277192,102275828,102275619,102272772,102271245,102270183,102269108,102267007,102265278,102264558,102262070,102261259,102259129,102257717,102254514	Gene ID= ENSG00000104517.12 TPM= 9.34 Transcript Type= protein_coding
chr8	102254198	102412759	102254198	102412759	-	ENST00000521922.5@UBR5	ENST00000521922.5	protein_coding	102412173,102361582,102361125,102360589,102360071,102346903,102346236,102345396,102342473,102329283,102329090,102327742,102326546,102323311,102314744,102313804,102312342,102312134,102311735,102311299,102305085,102304043,102300000,102299452,102298848,102298392,102297458,102296893,102295636,102295414,102295204,102294982,102293955,102293605,102289453,102288155,102287433,102286360,102285513,102285127,102281289,102280394,102279036,102278826,102276972,102275708,102275521,102272529,102271134,102270039,102268978,102266947,102265100,102264474,102261915,102261146,102258985,102257632,102254198	102412759,102361626,102361206,102360665,102360190,102347092,102346395,102345545,102342666,102329399,102329200,102327896,102326663,102323495,102314853,102313916,102312485,102312245,102311889,102311496,102305295,102304169,102300151,102299547,102298971,102298489,102297606,102296984,102295782,102295532,102295330,102295111,102294115,102293844,102289576,102288266,102287564,102286617,102285781,102285338,102281519,102280467,102279208,102278939,102277192,102275828,102275619,102272772,102271245,102270183,102269108,102267007,102265275,102264558,102262070,102261259,102259129,102257717,102254514	Gene ID= ENSG00000104517.12 TPM= 5.84 Transcript Type= protein_coding
chr8	102358771	102412724	102358771	102412724	-	transcript3516.chr8.nic@UBR5	transcript3516.chr8.nic	protein_coding	102412173,102361582,102361125,102360589,102358771	102412724,102361626,102361206,102360665,102360190	Gene ID= ENSG00000104517.12 TPM= 5.84 Transcript Type= NA
chr8	102648786	102654375	102648786	102654375	-	ENST00000395884.3@KLF10	ENST00000395884.3	protein_coding	102653470,102652164,102651149,102648786	102654375,102652397,102652061,102650391	Gene ID= ENSG00000155090.14 TPM= 76.48 Transcript Type= protein_coding
chr8	102648779	102655902	102648779	102655902	-	ENST00000285407.10@KLF10	ENST00000285407.10	protein_coding	102655566,102652164,102651149,102648779	102655902,102652397,102652061,102650391	Gene ID= ENSG00000155090.14 TPM= 148.87 Transcript Type= protein_coding
chr8	102806822	102809971	102806822	102809971	+	ENST00000517910.1@AP003356.1	ENST00000517910.1	lincRNA	102806822,102808934	102808553,102809971	Gene ID= ENSG00000253669.3 TPM= 1.17 Transcript Type= lincRNA
chr8	102827823	102864193	102827823	102864193	-	ENST00000347770.8@AZIN1	ENST00000347770.8	protein_coding	102863807,102858013,102849999,102843551,102839650,102838744,102836256,102834666,102834189,102833056,102829821,102829272,102827823	102864193,102858150,102850144,102843747,102839823,102838916,102836390,102834747,102834263,102833218,102829936,102829486,102828678	Gene ID= ENSG00000155096.13 TPM= 4.09 Transcript Type= protein_coding
chr8	102826357	102864737	102826357	102864737	-	ENST00000337198.9@AZIN1	ENST00000337198.9	protein_coding	102863807,102858013,102843551,102839650,102838744,102836256,102834666,102834189,102833056,102829821,102829272,102826357	102864737,102858150,102843747,102839823,102838916,102836390,102834747,102834263,102833218,102829936,102829486,102828678	Gene ID= ENSG00000155096.13 TPM= 72.39 Transcript Type= protein_coding
chr8	102863612	102868208	102863612	102868208	+	transcript3544.chr8.nnic@NA	transcript3544.chr8.nnic	NA	102863612	102868208	Gene ID= novel_gene_chr8_3545 TPM= 2.34 Transcript Type= NA
chr8	103021063	103073051	103021063	103073051	+	ENST00000395862.7@ATP6V1C1	ENST00000395862.7	protein_coding	103021063,103040798,103042340,103048870,103051050,103052731,103053884,103055868,103062955,103063135,103064714,103066321,103068652	103021182,103040968,103042407,103048955,103051144,103052822,103053982,103055936,103063047,103063228,103064811,103066447,103073051	Gene ID= ENSG00000155097.11 TPM= 21.02 Transcript Type= protein_coding
chr8	103021102	103069565	103021102	103069565	+	ENST00000518738.1@ATP6V1C1	ENST00000518738.1	protein_coding	103021102,103040798,103042340,103048870,103051050,103052731,103053884,103055868,103062955,103063135,103064714,103066321,103068652	103021225,103040968,103042407,103048955,103051144,103052822,103053982,103055936,103063047,103063228,103064811,103066447,103069565	Gene ID= ENSG00000155097.11 TPM= 11.68 Transcript Type= protein_coding
chr8	103043491	103047517	103043491	103047517	-	transcript3555.chr8.nnic@NA	transcript3555.chr8.nnic	NA	103043491	103047517	Gene ID= novel_gene_chr8_3556 TPM= 4.67 Transcript Type= NA
chr8	103140713	103230305	103140713	103230305	+	ENST00000438105.2@BAALC	ENST00000438105.2	protein_coding	103140713,103227989	103141057,103230305	Gene ID= ENSG00000164929.16 TPM= 5.84 Transcript Type= protein_coding
chr8	103140710	103230304	103140710	103230304	+	ENST00000309982.9@BAALC	ENST00000309982.9	protein_coding	103140710,103212919,103227989	103141057,103213085,103230304	Gene ID= ENSG00000164929.16 TPM= 24.52 Transcript Type= protein_coding
chr8	103298433	103332817	103298433	103332817	+	ENST00000522566.5@FZD6	ENST00000522566.5	protein_coding	103298433,103299956,103318590,103324481,103328268,103329655,103331341	103298570,103300284,103318786,103325498,103328416,103330065,103332817	Gene ID= ENSG00000164930.11 TPM= 3.5 Transcript Type= protein_coding
chr8	103298876	103332858	103298876	103332858	+	transcript3563.chr8.nic@FZD6	transcript3563.chr8.nic	protein_coding	103298876,103299956,103318590,103324481,103328268,103329655	103298995,103300284,103318786,103325498,103328416,103332858	Gene ID= ENSG00000164930.11 TPM= 4.67 Transcript Type= NA
chr8	103298831	103332859	103298831	103332859	+	ENST00000358755.4@FZD6	ENST00000358755.4	protein_coding	103298831,103299956,103318590,103324481,103328268,103329655,103331341	103298995,103300284,103318786,103325498,103328416,103330065,103332859	Gene ID= ENSG00000164930.11 TPM= 66.55 Transcript Type= protein_coding
chr8	103298831	103332866	103298831	103332866	+	ENST00000522484.5@FZD6	ENST00000522484.5	protein_coding	103298831,103299956,103318590,103324481,103329655,103331341	103298995,103300284,103318786,103325498,103330065,103332866	Gene ID= ENSG00000164930.11 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr8	103371515	103382997	103371515	103382997	+	ENST00000330295.9@CTHRC1	ENST00000330295.9	protein_coding	103371515,103375738,103378027,103382458	103371806,103375959,103378243,103382997	Gene ID= ENSG00000164932.12 TPM= 7.01 Transcript Type= protein_coding
chr8	103398962	103415167	103398962	103415167	-	transcript3610.chr8.nnic@SLC25A32	transcript3610.chr8.nnic	protein_coding	103414784,103413423,103407634,103404776,103403164,103401941,103401516,103398962	103415167,103413531,103407784,103404861,103403324,103402054,103401661,103400546	Gene ID= ENSG00000164933.11 TPM= 2.34 Transcript Type= NA
chr8	103398635	103415104	103398635	103415104	-	ENST00000297578.8@SLC25A32	ENST00000297578.8	protein_coding	103414784,103407634,103404776,103403164,103401941,103401516,103398635	103415104,103407784,103404861,103403324,103402054,103401661,103400546	Gene ID= ENSG00000164933.11 TPM= 21.02 Transcript Type= protein_coding
chr8	103414714	103443453	103414714	103443453	+	ENST00000297579.9@DCAF13	ENST00000297579.9	protein_coding	103414714,103420264,103420975,103426056,103427097,103430612,103432659,103435626,103440136,103441455,103442795	103415516,103420463,103421082,103426145,103427252,103430689,103432741,103435790,103440271,103441618,103443453	Gene ID= ENSG00000164934.13 TPM= 11.68 Transcript Type= protein_coding
chr8	104339826	104356689	104339826	104356689	+	ENST00000297581.2@DCSTAMP	ENST00000297581.2	protein_coding	104339826,104348541,104354877,104356124	104339862,104349581,104355185,104356689	Gene ID= ENSG00000164935.6 TPM= 18.68 Transcript Type= protein_coding
chr8	104339796	104356688	104339796	104356688	+	ENST00000622554.1@DCSTAMP	ENST00000622554.1	protein_coding	104339796,104348541,104356124	104339862,104349379,104356688	Gene ID= ENSG00000164935.6 TPM= 3.5 Transcript Type= protein_coding
chr8	104379424	104467053	104379424	104467053	-	ENST00000351513.6@DPYS	ENST00000351513.6	protein_coding	104466657,104451246,104447324,104444248,104429545,104427980,104424247,104392784,104381184,104379424	104467053,104451404,104447503,104444437,104429701,104428121,104424389,104392991,104381314,104379843	Gene ID= ENSG00000147647.12 TPM= 1.17 Transcript Type= protein_coding
chr8	104489250	104589006	104489250	104589006	-	ENST00000276654.9@LRP12	ENST00000276654.9	protein_coding	104588819,104531907,104508939,104499317,104496972,104495077,104489250	104589006,104531963,104509074,104499519,104498076,104495209,104491539	Gene ID= ENSG00000147650.11 TPM= 5.84 Transcript Type= protein_coding
chr8	105318692	105804532	105318692	105804532	+	ENST00000407775.6@ZFPM2	ENST00000407775.6	protein_coding	105318692,105419144,105444280,105561363,105634246,105788718,105798724,105801047	105318981,105419302,105444381,105561481,105634357,105788924,105798948,105804532	Gene ID= ENSG00000169946.13 TPM= 7.01 Transcript Type= protein_coding
chr8	106657854	106752694	106657854	106752694	+	transcript3635.chr8.nic@OXR1	transcript3635.chr8.nic	protein_coding	106657854,106679210,106683199,106684246,106692728,106702906,106706382,106710622,106713823,106737520,106739458,106740343,106742222,106745789,106750806	106658185,106679292,106683306,106684359,106692877,106703090,106707145,106710790,106713985,106737600,106739583,106740495,106742317,106745862,106752694	Gene ID= ENSG00000164830.18 TPM= 17.51 Transcript Type= NA
chr8	106657854	106752694	106657854	106752694	+	ENST00000312046.10@OXR1	ENST00000312046.10	protein_coding	106657854,106679210,106683199,106684246,106692728,106702906,106706382,106710622,106713823,106739458,106740343,106742222,106745789,106750806	106658185,106679292,106683306,106684359,106692877,106703090,106707145,106710790,106713985,106739583,106740495,106742317,106745862,106752694	Gene ID= ENSG00000164830.18 TPM= 21.02 Transcript Type= protein_coding
chr8	106657854	106707690	106657854	106707690	+	transcript3641.chr8.nic@OXR1	transcript3641.chr8.nic	protein_coding	106657854,106679210,106683199,106684246,106692728,106702906,106706382	106658185,106679292,106683306,106684359,106692877,106703090,106707690	Gene ID= ENSG00000164830.18 TPM= 3.5 Transcript Type= NA
chr8	107249493	107498055	107249493	107498055	-	ENST00000297450.7@ANGPT1	ENST00000297450.7	protein_coding	107497262,107346942,107336150,107321899,107303240,107293936,107284682,107264221,107249493	107498055,107347097,107336271,107322128,107303367,107294037,107284848,107264351,107252015	Gene ID= ENSG00000154188.9 TPM= 86.99 Transcript Type= protein_coding
chr8	107249482	107498010	107249482	107498010	-	ENST00000517746.5@ANGPT1	ENST00000517746.5	protein_coding	107497262,107346942,107336150,107321896,107303240,107293936,107284682,107264221,107249482	107498010,107347097,107336271,107322128,107303367,107294037,107284848,107264351,107252015	Gene ID= ENSG00000154188.9 TPM= 54.29 Transcript Type= protein_coding
chr8	107899317	108083648	107899317	108083648	-	ENST00000276659.9@RSPO2	ENST00000276659.9	protein_coding	108083197,108082545,107989056,107960674,107958080,107899317	108083648,108082807,107989244,107960817,107958268,107901190	Gene ID= ENSG00000147655.10 TPM= 33.86 Transcript Type= protein_coding
chr8	108201743	108248765	108201743	108248765	-	ENST00000220849.9@EIF3E	ENST00000220849.9	protein_coding	108248613,108241799,108239958,108236161,108234998,108229070,108228267,108217334,108216412,108214607,108203401,108202983,108201743	108248765,108241913,108240075,108236203,108235102,108229195,108228391,108217460,108216513,108214716,108203503,108203117,108201923	Gene ID= ENSG00000104408.9 TPM= 203.75 Transcript Type= protein_coding
chr8	108201780	108248698	108201780	108248698	-	ENST00000519030.5@EIF3E	ENST00000519030.5	protein_coding	108248613,108239958,108236161,108234998,108229070,108228267,108217334,108216412,108214607,108203401,108202983,108201780	108248698,108240075,108236203,108235102,108229195,108228391,108217460,108216513,108214716,108203503,108203117,108201923	Gene ID= ENSG00000104408.9 TPM= 1.17 Transcript Type= protein_coding
chr8	108233394	108248698	108233394	108248698	-	ENST00000521440.5@EIF3E	ENST00000521440.5	protein_coding	108248613,108241799,108239958,108236161,108234998,108233394	108248698,108241913,108240075,108236203,108235102,108233672	Gene ID= ENSG00000104408.9 TPM= 1.17 Transcript Type= protein_coding
chr8	108443624	108486912	108443624	108486912	+	ENST00000220853.7@EMC2	ENST00000220853.7	protein_coding	108443624,108449823,108450428,108453062,108455873,108469826,108470062,108475882,108476782,108479006,108486512	108443698,108449936,108450492,108453147,108455930,108469911,108470121,108475963,108476892,108479110,108486912	Gene ID= ENSG00000104412.7 TPM= 46.7 Transcript Type= protein_coding
chr8	109240919	109334385	109240919	109334385	-	ENST00000239690.8@NUDCD1	ENST00000239690.8	protein_coding	109333893,109322309,109296384,109293344,109289751,109280968,109275352,109271005,109245322,109240919	109334385,109322463,109296569,109293524,109289933,109281172,109275496,109271130,109245481,109243301	Gene ID= ENSG00000120526.10 TPM= 3.5 Transcript Type= protein_coding
chr8	109242675	109299137	109242675	109299137	-	transcript3685.chr8.nnic@NUDCD1	transcript3685.chr8.nnic	protein_coding	109299032,109296384,109293344,109289751,109280968,109275352,109271005,109245322,109242675	109299137,109296569,109293524,109289933,109281172,109275496,109271130,109245481,109243301	Gene ID= ENSG00000120526.10 TPM= 2.34 Transcript Type= NA
chr8	109334324	109343664	109334324	109343664	+	ENST00000521662.5@ENY2	ENST00000521662.5	protein_coding	109334324,109336128,109339320,109340489,109343405	109334402,109336204,109339390,109340563,109343664	Gene ID= ENSG00000120533.12 TPM= 9.34 Transcript Type= protein_coding
chr8	109364648	109369135	109364648	109369135	-	transcript3699.chr8.nnic@NA	transcript3699.chr8.nnic	NA	109364648	109369135	Gene ID= novel_gene_chr8_3700 TPM= 10.51 Transcript Type= NA
chr8	109464381	109531272	109464381	109531272	+	transcript3701.chr8.nnic@PKHD1L1	transcript3701.chr8.nnic	protein_coding	109464381,109466578,109475118,109476508,109477225,109479551,109479991,109481433,109482987,109485044,109486648,109489952,109490972,109491873,109493661,109496919,109497150,109498462,109498655,109504327,109507663,109508097,109510777,109515170,109518167,109522186,109522744,109523233,109526784,109530634	109465245,109466769,109475269,109476667,109477396,109479639,109480139,109481562,109483105,109485173,109486821,109490055,109491101,109491994,109493751,109497067,109497272,109498573,109498771,109504492,109507895,109508264,109510934,109515305,109518508,109522337,109522890,109523386,109527020,109531272	Gene ID= ENSG00000205038.11 TPM= 2.34 Transcript Type= NA
chr8	109539711	109565160	109539711	109565160	+	ENST00000395785.6@EBAG9	ENST00000395785.6	protein_coding	109539711,109550810,109553865,109554729,109556935,109560838,109564439	109539919,109550907,109553943,109554887,109557042,109560929,109565160	Gene ID= ENSG00000147654.14 TPM= 12.84 Transcript Type= protein_coding
chr8	109574186	109644817	109574186	109644817	-	ENST00000276646.13@SYBU	ENST00000276646.13	protein_coding	109644636,109642728,109618842,109586060,109579799,109577868,109574186	109644817,109642932,109619039,109586162,109580002,109578017,109576013	Gene ID= ENSG00000147642.16 TPM= 34.44 Transcript Type= protein_coding
chr8	109574206	109644817	109574206	109644817	-	ENST00000533065.5@SYBU	ENST00000533065.5	protein_coding	109644636,109618842,109586060,109579799,109577868,109574206	109644817,109619039,109586162,109580002,109578017,109576013	Gene ID= ENSG00000147642.16 TPM= 11.09 Transcript Type= protein_coding
chr8	116642130	116755821	116642130	116755821	-	ENST00000521861.5@EIF3H	ENST00000521861.5	protein_coding	116755666,116726016,116658813,116657215,116655856,116648806,116646471,116642130	116755821,116726172,116658980,116657314,116656005,116648926,116646603,116645103	Gene ID= ENSG00000147677.10 TPM= 159.96 Transcript Type= protein_coding
chr8	116766503	116774690	116766503	116774690	+	ENST00000309822.6@UTP23	ENST00000309822.6	protein_coding	116766503,116770192,116771456	116766791,116770366,116774690	Gene ID= ENSG00000147679.11 TPM= 44.37 Transcript Type= protein_coding
chr8	116766505	116849286	116766505	116849286	+	ENST00000521703.5@UTP23	ENST00000521703.5	protein_coding	116766505,116786503,116848888	116766791,116786649,116849286	Gene ID= ENSG00000147679.11 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr8	116845935	116874426	116845935	116874426	-	transcript3725.chr8.nic@RAD21	transcript3725.chr8.nic	protein_coding	116874310,116866586,116863130,116861841,116858352,116857267,116856646,116856166,116854245,116852549,116851948,116850618,116848946,116845935	116874426,116866761,116863259,116861940,116858458,116857473,116856771,116856288,116854468,116852708,116852096,116850767,116849029,116847691	Gene ID= ENSG00000164754.14 TPM= 4.67 Transcript Type= NA
chr8	116845935	116874529	116845935	116874529	-	transcript3726.chr8.nic@RAD21	transcript3726.chr8.nic	protein_coding	116874363,116866586,116863130,116861841,116858352,116857267,116856646,116856166,116854245,116852549,116851948,116850618,116848946,116845935	116874529,116866761,116863259,116861940,116858458,116857473,116856771,116856288,116854468,116852708,116852096,116850767,116849029,116847691	Gene ID= ENSG00000164754.14 TPM= 22.18 Transcript Type= NA
chr8	116850639	116874815	116850639	116874815	-	transcript3729.chr8.nic@RAD21	transcript3729.chr8.nic	protein_coding	116874611,116866586,116863130,116861841,116858352,116857267,116856646,116856166,116854245,116852549,116851948,116850639	116874815,116866761,116863259,116861940,116858458,116857473,116856771,116856288,116854468,116852708,116852096,116850767	Gene ID= ENSG00000164754.14 TPM= 5.84 Transcript Type= NA
chr8	116845935	116874866	116845935	116874866	-	ENST00000297338.6@RAD21	ENST00000297338.6	protein_coding	116874611,116866586,116863130,116861841,116858352,116857267,116856646,116856166,116854245,116852549,116851948,116850618,116848946,116845935	116874866,116866761,116863259,116861940,116858458,116857473,116856771,116856288,116854468,116852708,116852096,116850767,116849029,116847691	Gene ID= ENSG00000164754.14 TPM= 168.13 Transcript Type= protein_coding
chr8	116935656	116938438	116935656	116938438	-	transcript3741.chr8.nnic@NA	transcript3741.chr8.nnic	NA	116935656	116938438	Gene ID= novel_gene_chr8_3742 TPM= 4.67 Transcript Type= NA
chr8	116938199	116944487	116938199	116944487	+	ENST00000378279.3@AARD	ENST00000378279.3	protein_coding	116938199,116942558	116938567,116944487	Gene ID= ENSG00000205002.3 TPM= 1.17 Transcript Type= protein_coding
chr8	117520713	117540262	117520713	117540262	+	ENST00000297347.7@MED30	ENST00000297347.7	protein_coding	117520713,117528651,117530723,117539883	117521053,117528809,117530827,117540262	Gene ID= ENSG00000164758.7 TPM= 22.18 Transcript Type= protein_coding
chr8	117794490	118111853	117794490	118111853	-	ENST00000378204.6@EXT1	ENST00000378204.6	protein_coding	118110085,117837108,117835444,117830230,117822465,117819676,117818435,117812872,117807217,117804722,117794490	118111853,117837201,117835551,117830349,117822597,117819794,117818530,117812961,117807377,117804893,117799897	Gene ID= ENSG00000182197.10 TPM= 19.85 Transcript Type= protein_coding
chr8	118104991	118109373	118104991	118109373	+	transcript3748.chr8.nnic@NA	transcript3748.chr8.nnic	NA	118104991	118109373	Gene ID= novel_gene_chr8_3749 TPM= 4.67 Transcript Type= NA
chr8	118189459	118621945	118189459	118621945	-	ENST00000409003.4@SAMD12	ENST00000409003.4	protein_coding	118621804,118580715,118439832,118379560,118189459	118621945,118580893,118439961,118379700,118197732	Gene ID= ENSG00000177570.13 TPM= 5.84 Transcript Type= protein_coding
chr8	118923557	118952200	118923557	118952200	-	ENST00000297350.8@TNFRSF11B	ENST00000297350.8	protein_coding	118951792,118932931,118928738,118926494,118923557	118952200,118933300,118928929,118926718,118924762	Gene ID= ENSG00000164761.8 TPM= 23.35 Transcript Type= protein_coding
chr8	119208365	119245673	119208365	119245673	+	transcript3771.chr8.nnic@MAL2	transcript3771.chr8.nnic	protein_coding	119208365,119240165,119243417	119208604,119240320,119245673	Gene ID= ENSG00000147676.13 TPM= 14.01 Transcript Type= NA
chr8	119208371	119245673	119208371	119245673	+	ENST00000614891.4@MAL2	ENST00000614891.4	protein_coding	119208371,119221587,119240165,119243417	119208604,119221757,119240320,119245673	Gene ID= ENSG00000147676.13 TPM= 423.84 Transcript Type= protein_coding
chr8	119557086	119638840	119557086	119638840	-	transcript3777.chr8.nic@ENPP2	transcript3777.chr8.nic	protein_coding	119638748,119638425,119626565,119621394,119619244,119617466,119617164,119616265,119607922,119601397,119600678,119593752,119590505,119587044,119586186,119583962,119583717,119582430,119580116,119572176,119570705,119569235,119568175,119564823,119562857,119557086	119638840,119638527,119626720,119621519,119619304,119617563,119617243,119616384,119607977,119601462,119600750,119593860,119590630,119587075,119586313,119584049,119583804,119582602,119580167,119572250,119570841,119569370,119568252,119564955,119563013,119557691	Gene ID= ENSG00000136960.12 TPM= 7.88 Transcript Type= NA
chr8	119557086	119638841	119557086	119638841	-	transcript3779.chr8.nic@ENPP2	transcript3779.chr8.nic	protein_coding	119638748,119638425,119626565,119621394,119619244,119617466,119617164,119616265,119607922,119601397,119600678,119595847,119593752,119590505,119587044,119586186,119583962,119583717,119582430,119580116,119570705,119569235,119568175,119564823,119562857,119557086	119638841,119638527,119626720,119621519,119619304,119617563,119617243,119616384,119607977,119601462,119600750,119596002,119593860,119590630,119587075,119586313,119584049,119583804,119582602,119580167,119570841,119569370,119568252,119564955,119563013,119557691	Gene ID= ENSG00000136960.12 TPM= 5.55 Transcript Type= NA
chr8	119557086	119638862	119557086	119638862	-	transcript3782.chr8.nic@ENPP2	transcript3782.chr8.nic	protein_coding	119638748,119638425,119626565,119621394,119619244,119617466,119617164,119616265,119607922,119601397,119600678,119593752,119590505,119587044,119586186,119583962,119583717,119582430,119580116,119570705,119569235,119568175,119564823,119562857,119557086	119638862,119638527,119626720,119621519,119619304,119617563,119617243,119616384,119607977,119601462,119600750,119593860,119590630,119587075,119586313,119584049,119583804,119582602,119580167,119570841,119569370,119568252,119564955,119563013,119557691	Gene ID= ENSG00000136960.12 TPM= 80.27 Transcript Type= NA
chr8	119557086	119638830	119557086	119638830	-	ENST00000259486.10@ENPP2	ENST00000259486.10	protein_coding	119638748,119638425,119626565,119621394,119619244,119617466,119617164,119616265,119607922,119601397,119600678,119595847,119593752,119590505,119587044,119586186,119583962,119583717,119582418,119580116,119570705,119569235,119568175,119564823,119562857,119557086	119638830,119638527,119626720,119621519,119619304,119617563,119617243,119616384,119607977,119601462,119600750,119596002,119593860,119590630,119587075,119586313,119584049,119583804,119582602,119580167,119570841,119569370,119568252,119564955,119563013,119557691	Gene ID= ENSG00000136960.12 TPM= 14.89 Transcript Type= protein_coding
chr8	119730775	119832863	119730775	119832863	-	ENST00000378164.6@TAF2	ENST00000378164.6	protein_coding	119832482,119831677,119819346,119806283,119803878,119801794,119797662,119796990,119795532,119793366,119791324,119789592,119788790,119788338,119785201,119783381,119781053,119778019,119762415,119760599,119758073,119756006,119746705,119744288,119742534,119730775	119832863,119831731,119819506,119806401,119804019,119802025,119797846,119797103,119795631,119793451,119791459,119789746,119788904,119788447,119785266,119783633,119781193,119778129,119762608,119760738,119758142,119756115,119746934,119744393,119742656,119732186	Gene ID= ENSG00000064313.11 TPM= 4.67 Transcript Type= protein_coding
chr8	119833976	119856010	119833976	119856010	-	ENST00000313655.4@DSCC1	ENST00000313655.4	protein_coding	119855614,119853047,119850382,119846990,119843609,119842776,119841794,119838259,119833976	119856010,119853215,119850516,119847080,119843747,119842828,119841948,119838407,119835001	Gene ID= ENSG00000136982.5 TPM= 2.34 Transcript Type= protein_coding
chr8	119873717	120050913	119873717	120050913	+	ENST00000286234.5@DEPTOR	ENST00000286234.5	protein_coding	119873717,119928400,119929815,119965232,120001525,120002977,120006805,120009029,120049576	119873968,119928578,119929938,119965410,120001710,120003111,120006875,120009133,120050913	Gene ID= ENSG00000155792.9 TPM= 9.34 Transcript Type= protein_coding
chr8	120125108	120372036	120125108	120372036	+	ENST00000297848.7@COL14A1	ENST00000297848.7	protein_coding	120125108,120147806,120158130,120162426,120168161,120196791,120197811,120199402,120203709,120206943,120208232,120209756,120212448,120216351,120225088,120226627,120227220,120228710,120231467,120243879,120247613,120250617,120255240,120262868,120266827,120270035,120278111,120278435,120279935,120280711,120280921,120283636,120285861,120289608,120297511,120300732,120310009,120313932,120315533,120315944,120332141,120332664,120341325,120342380,120345375,120367171,120369330,120371152	120125340,120147930,120158246,120162569,120168247,120196946,120197930,120199566,120203870,120207094,120208361,120209901,120212577,120216490,120225214,120226766,120227352,120228769,120231618,120244008,120247735,120250766,120255356,120263014,120266883,120270174,120278234,120278578,120280099,120280749,120281059,120283778,120285970,120289766,120297588,120300818,120310062,120314027,120315586,120315997,120332194,120332735,120341360,120342446,120345563,120367248,120369485,120372036	Gene ID= ENSG00000187955.11 TPM= 19.27 Transcript Type= protein_coding
chr8	120125108	120370917	120125108	120370917	+	ENST00000309791.8@COL14A1	ENST00000309791.8	protein_coding	120125108,120147806,120158130,120162426,120168161,120196791,120197811,120199402,120203709,120206943,120208232,120209756,120212448,120216351,120225088,120226627,120227220,120228710,120231467,120243879,120247613,120250617,120255240,120262868,120266827,120270035,120278111,120278435,120279935,120280711,120280921,120283636,120285861,120289608,120297511,120300732,120310009,120313932,120315533,120315944,120332141,120332664,120341325,120342380,120345375,120367171,120369330,120370336	120125340,120147930,120158246,120162569,120168247,120196946,120197930,120199566,120203870,120207094,120208361,120209901,120212577,120216490,120225214,120226766,120227352,120228769,120231618,120244008,120247735,120250766,120255356,120263014,120266883,120270174,120278234,120278578,120280099,120280749,120281059,120283778,120285970,120289766,120297588,120300818,120310062,120314027,120315586,120315997,120332194,120332735,120341360,120342446,120345563,120367248,120369485,120370917	Gene ID= ENSG00000187955.11 TPM= 2.92 Transcript Type= protein_coding
chr8	120395847	120445386	120395847	120445386	-	ENST00000306185.7@MRPL13	ENST00000306185.7	protein_coding	120445068,120443185,120432030,120425306,120419852,120413991,120395847	120445386,120443308,120432123,120425366,120419938,120414112,120396125	Gene ID= ENSG00000172172.7 TPM= 24.52 Transcript Type= protein_coding
chr8	120441142	120443330	120441142	120443330	+	transcript3808.chr8.nnic@NA	transcript3808.chr8.nnic	NA	120441142	120443330	Gene ID= novel_gene_chr8_3809 TPM= 3.5 Transcript Type= NA
chr8	120445426	120523635	120445426	120523635	+	ENST00000305949.5@MTBP	ENST00000305949.5	protein_coding	120445426,120446433,120451003,120451171,120453847,120455435,120456553,120459215,120461161,120463692,120470820,120488159,120490463,120497393,120502492,120506706,120509934,120515925,120517851,120518704,120522654,120523298	120445588,120446513,120451076,120451322,120453905,120455579,120456670,120459349,120461255,120463761,120470937,120488332,120490570,120497554,120502609,120506861,120510029,120516191,120518100,120518817,120522719,120523635	Gene ID= ENSG00000172167.7 TPM= 3.5 Transcript Type= protein_coding
chr8	120645648	120654069	120645648	120654069	+	transcript3830.chr8.nnic@NA	transcript3830.chr8.nnic	NA	120645648	120654069	Gene ID= novel_gene_chr8_3831 TPM= 4.67 Transcript Type= NA
chr8	120811223	120813358	120811223	120813358	+	transcript3832.chr8.nnic@NA	transcript3832.chr8.nnic	NA	120811223	120813358	Gene ID= novel_gene_chr8_3833 TPM= 3.5 Transcript Type= NA
chr8	121612116	121641390	121612116	121641390	-	ENST00000303924.4@HAS2	ENST00000303924.4	protein_coding	121640853,121628714,121617105,121612116	121641390,121629340,121617206,121615038	Gene ID= ENSG00000170961.6 TPM= 2.34 Transcript Type= protein_coding
chr8	122781394	122974512	122781394	122974512	+	ENST00000314393.5@ZHX2	ENST00000314393.5	protein_coding	122781394,122863477,122951292,122973242	122781946,122863539,122954028,122974512	Gene ID= ENSG00000178764.7 TPM= 48.46 Transcript Type= protein_coding
chr8	122781704	122867799	122781704	122867799	+	transcript3843.chr8.nic@ZHX2	transcript3843.chr8.nic	protein_coding	122781704,122863477	122781946,122867799	Gene ID= ENSG00000178764.7 TPM= 5.25 Transcript Type= NA
chr8	122792755	122798813	122792755	122798813	+	transcript3844.chr8.nnic@NA	transcript3844.chr8.nnic	NA	122792755	122798813	Gene ID= novel_gene_chr8_3845 TPM= 2.34 Transcript Type= NA
chr8	123013164	123042423	123013164	123042423	-	ENST00000259512.8@DERL1	ENST00000259512.8	protein_coding	123041970,123030605,123024986,123023713,123022684,123021447,123019195,123013164	123042423,123030716,123025050,123023739,123022779,123021499,123019305,123015585	Gene ID= ENSG00000136986.9 TPM= 98.08 Transcript Type= protein_coding
chr8	123072691	123152153	123072691	123152153	+	transcript3857.chr8.nic@TBC1D31	transcript3857.chr8.nic	protein_coding	123072691,123077111,123082702,123084162,123093591,123097282,123100807,123105288,123109317,123109474,123120055,123126056,123126508,123128281,123129066,123130198,123134114,123140761,123144717,123150036,123151806	123072846,123077257,123082817,123084340,123093742,123097441,123101007,123105464,123109396,123109620,123120188,123126189,123126687,123128513,123129218,123130333,123134206,123140901,123144855,123150128,123152153	Gene ID= ENSG00000156787.16 TPM= 2.34 Transcript Type= NA
chr8	123072640	123152153	123072640	123152153	+	transcript3859.chr8.nic@TBC1D31	transcript3859.chr8.nic	protein_coding	123072640,123077111,123082702,123084162,123093591,123097282,123100807,123105288,123109317,123109474,123120055,123126056,123126508,123129070,123130198,123134114,123140761,123142262,123144717,123150036,123151806	123072846,123077257,123082817,123084340,123093742,123097441,123101007,123105464,123109396,123109620,123120188,123126189,123126687,123129218,123130333,123134206,123140901,123142456,123144855,123150128,123152153	Gene ID= ENSG00000156787.16 TPM= 3.5 Transcript Type= NA
chr8	123072680	123152150	123072680	123152150	+	ENST00000287380.5@TBC1D31	ENST00000287380.5	protein_coding	123072680,123077111,123082702,123084162,123093591,123097282,123100807,123105288,123109317,123109474,123120055,123126056,123126508,123128281,123129066,123130198,123134114,123140761,123142262,123144717,123150036,123151806	123072846,123077257,123082817,123084340,123093742,123097441,123101007,123105464,123109396,123109620,123120188,123126189,123126687,123128513,123129218,123130333,123134206,123140901,123142456,123144855,123150128,123152150	Gene ID= ENSG00000156787.16 TPM= 7.01 Transcript Type= protein_coding
chr8	123219957	123241398	123219957	123241398	-	ENST00000276704.5@C8orf76	ENST00000276704.5	protein_coding	123241230,123239049,123237798,123231300,123226500,123219957	123241398,123239144,123237941,123231757,123226632,123220297	Gene ID= ENSG00000189376.11 TPM= 11.68 Transcript Type= protein_coding
chr8	123248741	123274573	123248741	123274573	-	transcript3871.chr8.nic@ZHX1	transcript3871.chr8.nic	protein_coding	123274217,123267273,123248741	123274573,123267386,123256171	Gene ID= ENSG00000165156.14 TPM= 4.09 Transcript Type= NA
chr8	123319850	123396465	123319850	123396465	-	ENST00000287394.9@ATAD2	ENST00000287394.9	protein_coding	123396187,123380529,123372637,123371670,123371236,123370903,123369821,123369058,123361539,123359577,123359221,123357562,123356389,123349285,123348183,123347092,123346618,123346086,123344884,123339311,123337625,123336373,123334200,123333878,123328190,123325893,123322938,123319850	123396465,123380677,123372686,123371835,123371338,123370990,123370024,123369175,123361646,123359685,123359336,123357736,123356477,123349444,123348273,123347406,123346750,123346272,123345069,123339446,123337821,123336532,123334322,123334021,123328579,123326026,123323066,123321175	Gene ID= ENSG00000156802.12 TPM= 3.5 Transcript Type= protein_coding
chr8	123416726	123442240	123416726	123442240	+	ENST00000523984.5@WDYHV1	ENST00000523984.5	protein_coding	123416726,123427924,123429983,123436453,123437210,123441306	123416856,123428023,123430033,123436601,123437334,123442240	Gene ID= ENSG00000156795.6 TPM= 4.67 Transcript Type= protein_coding
chr8	123416725	123442021	123416725	123442021	+	ENST00000287387.6@WDYHV1	ENST00000287387.6	protein_coding	123416725,123427924,123429983,123436453,123437210,123441306	123416932,123428023,123430033,123436601,123437334,123442021	Gene ID= ENSG00000156795.6 TPM= 3.5 Transcript Type= protein_coding
chr8	123781476	123785904	123781476	123785904	-	transcript3897.chr8.nnic@NA	transcript3897.chr8.nnic	NA	123781476	123785904	Gene ID= novel_gene_chr8_3898 TPM= 12.84 Transcript Type= NA
chr8	123811602	123815441	123811602	123815441	+	transcript3895.chr8.nnic@NA	transcript3895.chr8.nnic	NA	123811602	123815441	Gene ID= novel_gene_chr8_3896 TPM= 9.34 Transcript Type= NA
chr8	124306189	124372701	124306189	124372701	-	transcript3899.chr8.nnic@TMEM65	transcript3899.chr8.nnic	protein_coding	124371854,124330748,124327354,124323321,124322105,124320086,124313965,124306189	124372701,124330792,124327421,124323375,124322147,124320191,124314061,124307447	Gene ID= ENSG00000164983.7 TPM= 4.09 Transcript Type= NA
chr8	124306189	124372701	124306189	124372701	-	transcript3902.chr8.nnic@TMEM65	transcript3902.chr8.nnic	protein_coding	124371854,124330748,124327354,124323321,124322105,124320159,124306189	124372701,124330792,124327421,124323375,124322147,124320191,124307447	Gene ID= ENSG00000164983.7 TPM= 2.92 Transcript Type= NA
chr8	124450807	124452852	124450807	124452852	+	transcript3906.chr8.nnic@NA	transcript3906.chr8.nnic	NA	124450807	124452852	Gene ID= novel_gene_chr8_3907 TPM= 5.84 Transcript Type= NA
chr8	124472810	124474576	124472810	124474576	-	ENST00000530778.1@RNF139-AS1	ENST00000530778.1	lincRNA	124472810	124474576	Gene ID= ENSG00000245149.3 TPM= 1.17 Transcript Type= lincRNA
chr8	124474738	124487914	124474738	124487914	+	ENST00000303545.3@RNF139	ENST00000303545.3	protein_coding	124474738,124485831	124475290,124487914	Gene ID= ENSG00000170881.4 TPM= 47.87 Transcript Type= protein_coding
chr8	124488508	124539088	124488508	124539088	-	ENST00000523214.5@TATDN1	ENST00000523214.5	protein_coding	124539025,124522937,124522151,124518818,124515887,124515746,124508603,124508474,124504271,124503840,124495472,124493833,124488508	124539088,124523002,124522200,124518881,124516030,124515788,124508688,124508514,124504347,124503951,124495542,124493959,124488696	Gene ID= ENSG00000147687.18 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr8	124488508	124539084	124488508	124539084	-	ENST00000276692.10@TATDN1	ENST00000276692.10	protein_coding	124539025,124522937,124522151,124518818,124515887,124515746,124508603,124508474,124504271,124495472,124493833,124488508	124539084,124523002,124522200,124518881,124516030,124515788,124508688,124508514,124504347,124495542,124493959,124488696	Gene ID= ENSG00000147687.18 TPM= 12.84 Transcript Type= protein_coding
chr8	124488508	124539086	124488508	124539086	-	transcript3911.chr8.nic@TATDN1	transcript3911.chr8.nic	protein_coding	124539025,124522937,124518742,124515887,124515746,124508603,124508474,124504271,124495472,124493833,124488508	124539086,124523002,124518881,124516030,124515788,124508688,124508514,124504347,124495542,124493959,124488696	Gene ID= ENSG00000147687.18 TPM= 2.34 Transcript Type= NA
chr8	124507196	124510047	124507196	124510047	-	transcript3916.chr8.nic@TATDN1	transcript3916.chr8.nic	protein_coding	124508603,124507196	124510047,124508514	Gene ID= ENSG00000147687.18 TPM= 2.34 Transcript Type= NA
chr8	124488630	124539070	124488630	124539070	-	ENST00000522810.5@TATDN1	ENST00000522810.5	protein_coding	124539025,124522937,124522151,124518818,124515887,124515746,124508603,124508474,124504275,124503840,124495472,124493833,124488630	124539070,124523002,124522200,124518881,124516030,124515788,124508688,124508514,124504347,124503951,124495542,124493959,124488696	Gene ID= ENSG00000147687.18 TPM= 1.17 Transcript Type= protein_coding
chr8	124539103	124549979	124539103	124549979	+	ENST00000276689.7@NDUFB9	ENST00000276689.7	protein_coding	124539103,124543087,124547000,124549761	124539287,124543279,124547113,124549979	Gene ID= ENSG00000147684.7 TPM= 72.39 Transcript Type= protein_coding
chr8	124550790	124728495	124550790	124728495	-	transcript3920.chr8.nic@MTSS1	transcript3920.chr8.nic	protein_coding	124727884,124704130,124699526,124591151,124589620,124585087,124580551,124568379,124567071,124565662,124562782,124556232,124555742,124550790	124728495,124704191,124699599,124591235,124589711,124585161,124580562,124568536,124567178,124565759,124562992,124556405,124555904,124553692	Gene ID= ENSG00000170873.18 TPM= 3.12 Transcript Type= NA
chr8	124550790	124728429	124550790	124728429	-	ENST00000518547.5@MTSS1	ENST00000518547.5	protein_coding	124727884,124704130,124699526,124591151,124589620,124585087,124568379,124567071,124565662,124562782,124557681,124556232,124555742,124550790	124728429,124704191,124699599,124591235,124589711,124585161,124568536,124567178,124565759,124562992,124557875,124556405,124555904,124553692	Gene ID= ENSG00000170873.18 TPM= 1.95 Transcript Type= protein_coding
chr8	124973298	124979389	124973298	124979389	+	ENST00000319286.5@ZNF572	ENST00000319286.5	protein_coding	124973298,124975606,124976348	124973416,124975719,124979389	Gene ID= ENSG00000180938.5 TPM= 2.34 Transcript Type= protein_coding
chr8	124998459	125022279	124998459	125022279	+	transcript3934.chr8.nic@SQLE	transcript3934.chr8.nic	protein_coding	124998459,125003176,125005525,125007391,125008971,125009172,125011537,125018059,125018631,125020784	124999694,125003428,125005705,125007487,125009084,125009343,125011632,125018201,125018727,125022279	Gene ID= ENSG00000104549.11 TPM= 9.34 Transcript Type= NA
chr8	124998506	125022283	124998506	125022283	+	ENST00000265896.9@SQLE	ENST00000265896.9	protein_coding	124998506,125003176,125005525,125007391,125008971,125009172,125011537,125018059,125018631,125020784,125021753	124999694,125003428,125005705,125007487,125009084,125009343,125011632,125018201,125018727,125020871,125022283	Gene ID= ENSG00000104549.11 TPM= 209 Transcript Type= protein_coding
chr8	125024260	125091840	125024260	125091840	-	ENST00000318410.11@WASHC5	ENST00000318410.11	protein_coding	125091615,125083713,125083113,125082383,125081661,125078738,125076348,125074998,125073153,125067592,125063522,125061082,125059376,125059222,125057556,125056677,125055591,125050564,125049006,125047207,125044536,125043992,125043825,125039795,125038830,125037237,125032241,125028620,125024260	125091840,125084022,125083258,125082467,125081761,125078930,125076500,125075111,125073324,125067719,125063651,125061194,125059542,125059297,125057666,125056817,125055671,125050665,125049185,125047331,125044698,125044094,125043904,125039898,125038959,125037333,125032394,125028707,125024673	Gene ID= ENSG00000164961.15 TPM= 70.06 Transcript Type= protein_coding
chr8	125091844	125367118	125091844	125367118	+	transcript3954.chr8.nic@NSMCE2	transcript3954.chr8.nic	protein_coding	125091844,125102014,125102317,125151171,125182103,125357219,125357712,125366768	125091958,125102146,125102487,125151277,125182256,125357319,125357818,125367118	Gene ID= ENSG00000156831.7 TPM= 2.34 Transcript Type= NA
chr8	125091853	125367120	125091853	125367120	+	ENST00000287437.7@NSMCE2	ENST00000287437.7	protein_coding	125091853,125102051,125102317,125151171,125182103,125357219,125357712,125366768	125091958,125102146,125102487,125151277,125182256,125357319,125357818,125367120	Gene ID= ENSG00000156831.7 TPM= 8.17 Transcript Type= protein_coding
chr8	125091870	125367075	125091870	125367075	+	ENST00000522563.5@NSMCE2	ENST00000522563.5	protein_coding	125091870,125102317,125151171,125182103,125357219,125357712,125366768	125091958,125102487,125151277,125182256,125357319,125357818,125367075	Gene ID= ENSG00000156831.7 TPM= 2.34 Transcript Type= protein_coding
chr8	125430331	125438403	125430331	125438403	+	transcript3965.chr8.nic@TRIB1	transcript3965.chr8.nic	protein_coding	125430331,125433317,125436006	125431262,125433768,125438403	Gene ID= ENSG00000173334.3 TPM= 8.17 Transcript Type= NA
chr8	125430321	125438405	125430321	125438405	+	ENST00000311922.3@TRIB1	ENST00000311922.3	protein_coding	125430321,125433317,125436006	125431262,125433609,125438405	Gene ID= ENSG00000173334.3 TPM= 65.39 Transcript Type= protein_coding
chr8	125433478	125438399	125433478	125438399	+	transcript3966.chr8.nnic@NA	transcript3966.chr8.nnic	NA	125433478	125438399	Gene ID= novel_gene_chr8_3967 TPM= 2.34 Transcript Type= NA
chr8	126552443	126558480	126552443	126558480	-	transcript3969.chr8.nic@FAM84B	transcript3969.chr8.nic	protein_coding	126558034,126556265,126552443	126558480,126557485,126553503	Gene ID= ENSG00000168672.3 TPM= 3.5 Transcript Type= NA
chr8	126552539	126558423	126552539	126558423	-	transcript3972.chr8.nnic@FAM84B	transcript3972.chr8.nnic	protein_coding	126558020,126552539	126558423,126557485	Gene ID= ENSG00000168672.3 TPM= 2.34 Transcript Type= NA
chr8	126552442	126558393	126552442	126558393	-	ENST00000304916.3@FAM84B	ENST00000304916.3	protein_coding	126558034,126552442	126558393,126557485	Gene ID= ENSG00000168672.3 TPM= 30.36 Transcript Type= protein_coding
chr8	127737736	127741434	127737736	127741434	+	transcript3983.chr8.nnic@MYC	transcript3983.chr8.nnic	protein_coding	127737736,127738251,127740396	127737853,127739019,127741434	Gene ID= ENSG00000136997.17 TPM= 15.18 Transcript Type= NA
chr8	127737749	127741434	127737749	127741434	+	transcript3984.chr8.nic@MYC	transcript3984.chr8.nic	protein_coding	127737749,127740396	127739019,127741434	Gene ID= ENSG00000136997.17 TPM= 22.18 Transcript Type= NA
chr8	127896244	127897816	127896244	127897816	+	transcript3992.chr8.nnic@NA	transcript3992.chr8.nnic	NA	127896244	127897816	Gene ID= novel_gene_chr8_3993 TPM= 2.34 Transcript Type= NA
chr8	129748196	129752886	129748196	129752886	-	ENST00000522273.5@GSDMC	ENST00000522273.5	protein_coding	129752698,129752106,129751862,129751542,129750431,129749990,129749452,129748196	129752886,129752147,129751891,129751568,129750570,129750119,129749525,129748740	Gene ID= ENSG00000147697.8 TPM= 1.17 Transcript Type= retained_intron
chr8	129841470	130016690	129841470	130016690	-	transcript4007.chr8.nic@FAM49B	transcript4007.chr8.nic	protein_coding	130016370,129970943,129904499,129903312,129879389,129871375,129862229,129855611,129854266,129852162,129850835,129849243,129846804,129841470	130016690,129970995,129904585,129903350,129879471,129871496,129862334,129855747,129854343,129852278,129850914,129849369,129846874,129842205	Gene ID= ENSG00000153310.19 TPM= 32.69 Transcript Type= NA
chr8	129841470	130016555	129841470	130016555	-	transcript4023.chr8.nic@FAM49B	transcript4023.chr8.nic	protein_coding	130016370,129970943,129904499,129903312,129871375,129862229,129855611,129854266,129852162,129850835,129849243,129846804,129841470	130016555,129970995,129904585,129903350,129871496,129862334,129855747,129854343,129852278,129850914,129849369,129846874,129842205	Gene ID= ENSG00000153310.19 TPM= 5.84 Transcript Type= NA
chr8	129841470	130016556	129841470	130016556	-	transcript4028.chr8.nic@FAM49B	transcript4028.chr8.nic	protein_coding	130016370,129970943,129903312,129871375,129862229,129855611,129854266,129852162,129850835,129849243,129846804,129841470	130016556,129970995,129903350,129871496,129862334,129855747,129854343,129852278,129850914,129849369,129846874,129842205	Gene ID= ENSG00000153310.19 TPM= 4.67 Transcript Type= NA
chr8	129839593	129939832	129839593	129939832	-	ENST00000519824.6@FAM49B	ENST00000519824.6	protein_coding	129939608,129903312,129879389,129871375,129862229,129855611,129854266,129852162,129850835,129849243,129846804,129839593	129939832,129903350,129879471,129871496,129862334,129855747,129854343,129852278,129850914,129849369,129846874,129842205	Gene ID= ENSG00000153310.19 TPM= 3.5 Transcript Type= protein_coding
chr8	129841484	130016451	129841484	130016451	-	ENST00000517654.5@FAM49B	ENST00000517654.5	protein_coding	130016370,129970943,129903312,129879389,129871375,129862229,129855611,129854266,129852162,129850835,129849243,129846804,129841484	130016451,129970995,129903350,129879471,129871496,129862334,129855747,129854343,129852278,129850914,129849369,129846874,129842205	Gene ID= ENSG00000153310.19 TPM= 38.53 Transcript Type= protein_coding
chr8	129841470	130016672	129841470	130016672	-	ENST00000519110.5@FAM49B	ENST00000519110.5	protein_coding	130016607,129970943,129904499,129903312,129879389,129871375,129862229,129855611,129854266,129852162,129850835,129849243,129846804,129841470	130016672,129970995,129904585,129903350,129879471,129871496,129862334,129855747,129854343,129852278,129850914,129849369,129846874,129842205	Gene ID= ENSG00000153310.19 TPM= 5.84 Transcript Type= protein_coding
chr8	129841470	130016405	129841470	130016405	-	ENST00000523509.5@FAM49B	ENST00000523509.5	protein_coding	130016370,129970943,129903312,129896672,129879389,129871375,129862229,129855611,129854266,129852162,129850835,129849243,129846804,129841470	130016405,129970995,129903350,129896854,129879471,129871496,129862334,129855747,129854343,129852278,129850914,129849369,129846874,129842205	Gene ID= ENSG00000153310.19 TPM= 1.17 Transcript Type= protein_coding
chr8	131904088	132013642	131904088	132013642	+	ENST00000254624.9@EFR3A	ENST00000254624.9	protein_coding	131904088,131940499,131944745,131946483,131949969,131953818,131955768,131959585,131968295,131970476,131976027,131977041,131978847,131979346,131984139,131984929,131986194,131987575,131996406,132001759,132002603,132003236,132010790	131904322,131940575,131944872,131946633,131950090,131953967,131955905,131959663,131968430,131970643,131976141,131977092,131979019,131979421,131984300,131985060,131986261,131987702,131996497,132001807,132002706,132003285,132013642	Gene ID= ENSG00000132294.14 TPM= 6.42 Transcript Type= protein_coding
chr8	131913134	131917318	131913134	131917318	-	transcript4060.chr8.nnic@NA	transcript4060.chr8.nnic	NA	131913134	131917318	Gene ID= novel_gene_chr8_4061 TPM= 2.34 Transcript Type= NA
chr8	131958590	131962081	131958590	131962081	-	transcript4062.chr8.nnic@NA	transcript4062.chr8.nnic	NA	131958590	131962081	Gene ID= novel_gene_chr8_4063 TPM= 2.34 Transcript Type= NA
chr8	132775346	132825371	132775346	132825371	+	transcript4077.chr8.nic@PHF20L1	transcript4077.chr8.nic	protein_coding	132775346,132777796,132794410,132794733,132798772,132799083,132803819,132804615,132811046,132814637,132816888,132817339,132824004,132825264	132775645,132777911,132794581,132794817,132798860,132799172,132804032,132804740,132811128,132814889,132817076,132817545,132824060,132825371	Gene ID= ENSG00000129292.20 TPM= 3.5 Transcript Type= NA
chr8	132775345	132825371	132775345	132825371	+	transcript4079.chr8.nic@PHF20L1	transcript4079.chr8.nic	protein_coding	132775345,132777792,132794410,132794733,132798772,132803819,132804615,132811046,132814637,132816888,132817339,132824004,132825264	132775645,132777911,132794581,132794817,132798860,132804032,132804740,132811128,132814889,132817076,132817545,132824060,132825371	Gene ID= ENSG00000129292.20 TPM= 12.84 Transcript Type= NA
chr8	132775345	132813188	132775345	132813188	+	transcript4091.chr8.nic@PHF20L1	transcript4091.chr8.nic	protein_coding	132775345,132777792,132794410,132794733,132798772,132803819,132804615,132811046	132775645,132777911,132794581,132794817,132798860,132804032,132804740,132813188	Gene ID= ENSG00000129292.20 TPM= 4.09 Transcript Type= NA
chr8	132775408	132812316	132775408	132812316	+	ENST00000337920.8@PHF20L1	ENST00000337920.8	protein_coding	132775408,132777796,132794410,132794733,132798772,132803819,132804615,132811046	132775645,132777911,132794581,132794817,132798860,132804032,132804740,132812316	Gene ID= ENSG00000129292.20 TPM= 2.34 Transcript Type= protein_coding
chr8	133035753	133075061	133035753	133075061	-	transcript4098.chr8.nic@SLA	transcript4098.chr8.nic	protein_coding	133074853,133060100,133050816,133049902,133047830,133044984,133039998,133035753	133075061,133060200,133050915,133049988,133047933,133045115,133040130,133038737	Gene ID= ENSG00000155926.13 TPM= 14.21 Transcript Type= NA
chr8	133036724	133103054	133036724	133103054	-	ENST00000338087.9@SLA	ENST00000338087.9	protein_coding	133102553,133074853,133060100,133050816,133049902,133047830,133044984,133039998,133036724	133103054,133075130,133060200,133050915,133049988,133047933,133045115,133040130,133038737	Gene ID= ENSG00000155926.13 TPM= 110.54 Transcript Type= protein_coding
chr8	133126092	133129144	133126092	133129144	-	transcript4101.chr8.nnic@NA	transcript4101.chr8.nnic	NA	133126092	133129144	Gene ID= novel_gene_chr8_4102 TPM= 2.34 Transcript Type= NA
chr8	133237171	133297237	133237171	133297237	-	ENST00000323851.11@NDRG1	ENST00000323851.11	protein_coding	133297134,133284249,133280232,133264547,133262047,133259168,133258366,133256777,133254539,133250440,133248715,133247875,133246616,133244355,133242023,133237171	133297237,133284329,133280267,133264652,133262167,133259230,133258426,133256863,133254595,133250543,133248771,133247926,133246663,133244390,133242074,133239119	Gene ID= ENSG00000104419.14 TPM= 337.43 Transcript Type= protein_coding
chr8	133458873	133571996	133458873	133571996	-	transcript4112.chr8.nnic@ST3GAL1	transcript4112.chr8.nnic	protein_coding	133571693,133545774,133507199,133499135,133476278,133475719,133465894,133464778,133463414,133461875,133458873	133571996,133545926,133507321,133499189,133476600,133476074,133466090,133464957,133463459,133461994,133459937	Gene ID= ENSG00000008513.14 TPM= 3.89 Transcript Type= NA
chr8	133458873	133571892	133458873	133571892	-	transcript4118.chr8.nic@ST3GAL1	transcript4118.chr8.nic	protein_coding	133571693,133545774,133539637,133499135,133475719,133465894,133464778,133463414,133461875,133458873	133571892,133545926,133539729,133499189,133476600,133466090,133464957,133463459,133461994,133459937	Gene ID= ENSG00000008513.14 TPM= 6.22 Transcript Type= NA
chr8	133458873	133571939	133458873	133571939	-	transcript4127.chr8.nic@ST3GAL1	transcript4127.chr8.nic	protein_coding	133571693,133545774,133475719,133465894,133464778,133463414,133461875,133458873	133571939,133545926,133476600,133466090,133464957,133463459,133461994,133459937	Gene ID= ENSG00000008513.14 TPM= 3.89 Transcript Type= NA
chr8	133454853	133571925	133454853	133571925	-	ENST00000521180.5@ST3GAL1	ENST00000521180.5	protein_coding	133571693,133545774,133499135,133475719,133465894,133464778,133463414,133461875,133454853	133571925,133545926,133499189,133476600,133466090,133464957,133463459,133461994,133459937	Gene ID= ENSG00000008513.14 TPM= 52.54 Transcript Type= protein_coding
chr8	133458945	133571849	133458945	133571849	-	ENST00000522652.5@ST3GAL1	ENST00000522652.5	protein_coding	133571693,133545774,133499135,133476278,133475719,133465894,133464778,133463414,133461875,133458945	133571849,133545926,133499189,133476600,133476074,133466090,133464957,133463459,133461994,133459937	Gene ID= ENSG00000008513.14 TPM= 47.87 Transcript Type= protein_coding
chr8	133530267	133532284	133530267	133532284	-	transcript4130.chr8.nnic@NA	transcript4130.chr8.nnic	NA	133530267	133532284	Gene ID= novel_gene_chr8_4131 TPM= 2.34 Transcript Type= NA
chr8	133572283	133573854	133572283	133573854	+	transcript4132.chr8.nnic@NA	transcript4132.chr8.nnic	NA	133572283	133573854	Gene ID= novel_gene_chr8_4133 TPM= 2.34 Transcript Type= NA
chr8	135457457	135647610	135457457	135647610	+	ENST00000355849.9@KHDRBS3	ENST00000355849.9	protein_coding	135457457,135521237,135542654,135548754,135557448,135581878,135606955,135645059,135646993	135457954,135521355,135542770,135548900,135557587,135582073,135607037,135645117,135647610	Gene ID= ENSG00000131773.13 TPM= 16.35 Transcript Type= protein_coding
chr8	137809675	137810873	137809675	137810873	-	transcript4150.chr8.nnic@NA	transcript4150.chr8.nnic	NA	137809675	137810873	Gene ID= novel_gene_chr8_4151 TPM= 2.34 Transcript Type= NA
chr8	138588235	138680849	138588235	138680849	-	transcript4152.chr8.nnic@COL22A1	transcript4152.chr8.nnic	protein_coding	138680709,138676558,138663705,138662030,138660436,138655897,138649665,138646629,138636742,138635010,138630695,138626190,138623732,138619455,138616914,138616001,138613867,138607936,138606381,138604734,138602115,138598719,138596904,138594017,138591424,138588235	138680849,138676635,138663740,138662083,138660480,138655944,138649778,138646682,138636795,138635063,138630748,138626243,138623785,138619508,138616958,138616054,138613920,138607989,138606452,138604769,138602159,138598898,138596970,138594199,138591501,138589440	Gene ID= ENSG00000169436.16 TPM= 2.92 Transcript Type= NA
chr8	138588235	138608096	138588235	138608096	-	transcript4154.chr8.nic@COL22A1	transcript4154.chr8.nic	protein_coding	138607936,138606381,138604734,138602115,138598719,138596904,138594017,138591424,138588235	138608096,138606452,138604769,138602159,138598898,138596970,138594199,138591501,138589440	Gene ID= ENSG00000169436.16 TPM= 7.59 Transcript Type= NA
chr8	139728071	139731202	139728071	139731202	-	transcript4163.chr8.nnic@NA	transcript4163.chr8.nnic	NA	139728071	139731202	Gene ID= novel_gene_chr8_4164 TPM= 2.34 Transcript Type= NA
chr8	139730345	140457762	139730345	140457762	-	ENST00000438773.2@TRAPPC9	ENST00000438773.2	protein_coding	140457639,140450790,140439052,140435112,140426615,140405577,140397620,140370964,140360050,140311248,140300469,140290993,140287608,140283889,140275658,140252777,140221459,140023937,139988726,139910147,139885879,139731979,139730345	140457762,140451383,140439197,140435240,140426641,140405698,140397745,140371180,140360193,140311374,140300614,140291078,140287734,140284021,140275821,140252929,140221583,140024079,139988836,139910300,139885969,139732202,139731228	Gene ID= ENSG00000167632.14 TPM= 33.86 Transcript Type= protein_coding
chr8	139833848	139835783	139833848	139835783	+	transcript4159.chr8.nnic@NA	transcript4159.chr8.nnic	NA	139833848	139835783	Gene ID= novel_gene_chr8_4160 TPM= 2.34 Transcript Type= NA
chr8	140149243	140152256	140149243	140152256	+	transcript4161.chr8.nnic@NA	transcript4161.chr8.nnic	NA	140149243	140152256	Gene ID= novel_gene_chr8_4162 TPM= 3.5 Transcript Type= NA
chr8	140511298	140517137	140511298	140517137	+	ENST00000220913.9@CHRAC1	ENST00000220913.9	protein_coding	140511298,140514369,140515126	140511646,140514495,140517137	Gene ID= ENSG00000104472.9 TPM= 7.01 Transcript Type= protein_coding
chr8	140526925	140548333	140526925	140548333	-	transcript4177.chr8.nic@AGO2	transcript4177.chr8.nic	protein_coding	140547468,140544213,140541164,140539320,140535468,140532416,140526925	140548333,140544303,140541358,140539454,140535569,140532615,140532152	Gene ID= ENSG00000123908.11 TPM= 15.76 Transcript Type= NA
chr8	140520156	140635619	140520156	140635619	-	ENST00000220592.9@AGO2	ENST00000220592.9	protein_coding	140635485,140585119,140572812,140562453,140560374,140559395,140558485,140557089,140556167,140555896,140551303,140549114,140547468,140544213,140541164,140539320,140535468,140532416,140520156	140635619,140585311,140572932,140562634,140560510,140559529,140558572,140557236,140556286,140556018,140551436,140549298,140547627,140544303,140541358,140539454,140535569,140532615,140532152	Gene ID= ENSG00000123908.11 TPM= 25.1 Transcript Type= protein_coding
chr8	140565781	140568298	140565781	140568298	+	transcript4179.chr8.nnic@NA	transcript4179.chr8.nnic	NA	140565781	140568298	Gene ID= novel_gene_chr8_4180 TPM= 5.84 Transcript Type= NA
chr8	140658405	141001379	140658405	141001379	-	ENST00000519993.5@PTK2	ENST00000519993.5	protein_coding	141001125,140890543,140864312,140846599,140846260,140830472,140818880,140818277,140803543,140800459,140793354,140789474,140769575,140764234,140762368,140761165,140752232,140746760,140744652,140743230,140739018,140735251,140717598,140706119,140702570,140700891,140686632,140675460,140674298,140669727,140668269,140664917,140658405	141001379,140890769,140864399,140846678,140846322,140830526,140819020,140818354,140803650,140800576,140793384,140789526,140769592,140764290,140762388,140761262,140752316,140746860,140744767,140743330,140739107,140735455,140717709,140706205,140702707,140701022,140686694,140675499,140674404,140669735,140668424,140664997,140659678	Gene ID= ENSG00000169398.19 TPM= 2.53 Transcript Type= nonsense_mediated_decay
chr8	140658402	141001334	140658402	141001334	-	transcript4193.chr8.nic@PTK2	transcript4193.chr8.nic	protein_coding	141001125,140925661,140920814,140890543,140879471,140864312,140846599,140846260,140830472,140818880,140818277,140803543,140800459,140793354,140789474,140764234,140761165,140752232,140746760,140744652,140743230,140739018,140735251,140717598,140706119,140702570,140700891,140686632,140675460,140674298,140668269,140664917,140658402	141001334,140925749,140921132,140890769,140879637,140864399,140846678,140846322,140830526,140819020,140818354,140803650,140800576,140793384,140789526,140764290,140761262,140752316,140746860,140744767,140743330,140739107,140735455,140717709,140706205,140702707,140701022,140686694,140675499,140674404,140668424,140664997,140659678	Gene ID= ENSG00000169398.19 TPM= 6.12 Transcript Type= NA
chr8	140658402	141001280	140658402	141001280	-	transcript4195.chr8.nic@PTK2	transcript4195.chr8.nic	protein_coding	141001125,140983842,140925661,140890543,140879471,140864312,140846599,140846260,140830472,140818880,140818277,140803543,140800459,140793354,140789474,140764234,140761165,140752232,140746760,140744652,140743230,140739018,140735251,140717598,140706119,140702570,140700891,140686632,140675460,140674298,140668269,140664917,140658402	141001280,140984155,140925749,140890769,140879637,140864399,140846678,140846322,140830526,140819020,140818354,140803650,140800576,140793384,140789526,140764290,140761262,140752316,140746860,140744767,140743330,140739107,140735455,140717709,140706205,140702707,140701022,140686694,140675499,140674404,140668424,140664997,140659678	Gene ID= ENSG00000169398.19 TPM= 7.87 Transcript Type= NA
chr8	140658402	141001341	140658402	141001341	-	transcript4204.chr8.nic@PTK2	transcript4204.chr8.nic	protein_coding	141001125,140948666,140890543,140879471,140864312,140846599,140846260,140830472,140818880,140818277,140803543,140800459,140793354,140789474,140764234,140761165,140752232,140746760,140744652,140743230,140739018,140735251,140717598,140706119,140702570,140700891,140686632,140675460,140674298,140668269,140664917,140658402	141001341,140948723,140890769,140879637,140864399,140846678,140846322,140830526,140819020,140818354,140803650,140800576,140793384,140789526,140764290,140761262,140752316,140746860,140744767,140743330,140739107,140735455,140717709,140706205,140702707,140701022,140686694,140675499,140674404,140668424,140664997,140659678	Gene ID= ENSG00000169398.19 TPM= 6.12 Transcript Type= NA
chr8	140658402	141001042	140658402	141001042	-	transcript4209.chr8.nic@PTK2	transcript4209.chr8.nic	protein_coding	141000880,140890543,140879471,140864312,140846599,140846260,140830472,140818880,140818277,140803543,140800459,140793354,140789474,140764234,140761165,140752232,140746760,140744652,140743230,140739018,140735251,140717598,140706119,140702570,140700891,140686632,140675460,140674298,140668269,140664917,140658402	141001042,140890769,140879637,140864399,140846678,140846322,140830526,140819020,140818354,140803650,140800576,140793384,140789526,140764290,140761262,140752316,140746860,140744767,140743330,140739107,140735455,140717709,140706205,140702707,140701022,140686694,140675499,140674404,140668424,140664997,140659678	Gene ID= ENSG00000169398.19 TPM= 6.12 Transcript Type= NA
chr8	140658402	141001329	140658402	141001329	-	transcript4210.chr8.nic@PTK2	transcript4210.chr8.nic	protein_coding	141001125,140890543,140879471,140864312,140846599,140846260,140830472,140818880,140818277,140803543,140800459,140793354,140789474,140764234,140761165,140752232,140746760,140744652,140743230,140739018,140735251,140717598,140706119,140702570,140700891,140686632,140675460,140674298,140668269,140664917,140658402	141001329,140890769,140879637,140864399,140846678,140846322,140830526,140819020,140818354,140803650,140800576,140793384,140789526,140764290,140761262,140752316,140746860,140744767,140743330,140739107,140735455,140717709,140706205,140702707,140701022,140686694,140675499,140674404,140668424,140664997,140659678	Gene ID= ENSG00000169398.19 TPM= 41.15 Transcript Type= NA
chr8	140658402	140718742	140658402	140718742	-	transcript4228.chr8.nic@PTK2	transcript4228.chr8.nic	protein_coding	140718317,140717598,140706119,140702570,140700891,140675460,140674298,140668269,140664917,140658402	140718742,140717709,140706205,140702707,140701022,140675499,140674404,140668424,140664997,140659678	Gene ID= ENSG00000169398.19 TPM= 5.08 Transcript Type= NA
chr8	141128627	141195802	141128627	141195802	+	transcript4241.chr8.nnic@DENND3	transcript4241.chr8.nnic	protein_coding	141128627,141136509,141138022,141141203,141144148,141150834,141151619,141155849,141160632,141165186,141166190,141168004,141175200,141176591,141178067,141180747,141185139,141188986,141190284,141192331,141192526,141194033	141128809,141136791,141138137,141141324,141144259,141150953,141151837,141155970,141160787,141165289,141166389,141168525,141175279,141176761,141178196,141180854,141185278,141189146,141190417,141192449,141192663,141195802	Gene ID= ENSG00000105339.10 TPM= 8.37 Transcript Type= NA
chr8	141157760	141195802	141157760	141195802	+	transcript4246.chr8.nnic@DENND3	transcript4246.chr8.nnic	protein_coding	141157760,141160629,141163333,141165186,141166190,141168004,141175200,141176591,141180747,141185139,141188986,141190284,141192331,141192526,141194033	141158284,141160787,141163429,141165289,141166389,141168525,141175459,141178196,141180854,141185278,141189146,141190417,141192449,141192663,141195802	Gene ID= ENSG00000105339.10 TPM= 22.38 Transcript Type= NA
chr8	141128638	141195808	141128638	141195808	+	ENST00000519811.5@DENND3	ENST00000519811.5	protein_coding	141128638,141136509,141138022,141141203,141144148,141150834,141151619,141155849,141160632,141163333,141165186,141166190,141168004,141175200,141176591,141178067,141180747,141185139,141188986,141190284,141192331,141192526,141194033	141128809,141136791,141138137,141141324,141144259,141150953,141151837,141155970,141160787,141163429,141165289,141166389,141168525,141175459,141176761,141178196,141180854,141185278,141189146,141190417,141192449,141192663,141195808	Gene ID= ENSG00000105339.10 TPM= 45.15 Transcript Type= protein_coding
chr8	141169632	141172928	141169632	141172928	+	transcript4248.chr8.nnic@NA	transcript4248.chr8.nnic	NA	141169632	141172928	Gene ID= novel_gene_chr8_4249 TPM= 4.67 Transcript Type= NA
chr8	141416486	141431520	141416486	141431520	+	transcript4265.chr8.nnic@PTP4A3	transcript4265.chr8.nnic	protein_coding	141416486,141421388,141425048,141426939,141427750,141430927	141417357,141422345,141425140,141427069,141427824,141431520	Gene ID= ENSG00000184489.11 TPM= 5.06 Transcript Type= NA
chr8	141417910	141431520	141417910	141431520	+	transcript4268.chr8.nnic@PTP4A3	transcript4268.chr8.nnic	protein_coding	141417910,141421388,141425048,141426939,141427750,141430927	141418018,141422345,141425140,141427069,141427824,141431520	Gene ID= ENSG00000184489.11 TPM= 6.22 Transcript Type= NA
chr8	141391995	141431520	141391995	141431520	+	ENST00000520105.5@PTP4A3	ENST00000520105.5	protein_coding	141391995,141421388,141425048,141426939,141430927	141392084,141422345,141425140,141427069,141431520	Gene ID= ENSG00000184489.11 TPM= 5.84 Transcript Type= protein_coding
chr8	141421388	141432454	141421388	141432454	+	ENST00000329397.5@PTP4A3	ENST00000329397.5	protein_coding	141421388,141425048,141426939,141427750,141430927	141422345,141425140,141427069,141427824,141432454	Gene ID= ENSG00000184489.11 TPM= 23.74 Transcript Type= protein_coding
chr8	141421388	141432454	141421388	141432454	+	ENST00000349124.2@PTP4A3	ENST00000349124.2	protein_coding	141421388,141425048,141426939,141430927	141422345,141425140,141427069,141432454	Gene ID= ENSG00000184489.11 TPM= 5.84 Transcript Type= protein_coding
chr8	141428867	141431520	141428867	141431520	+	transcript4276.chr8.nnic@NA	transcript4276.chr8.nnic	NA	141428867	141431520	Gene ID= novel_gene_chr8_4277 TPM= 2.34 Transcript Type= NA
chr8	142269466	142403185	142269466	142403185	-	transcript4280.chr8.nnic@TSNARE1	transcript4280.chr8.nnic	protein_coding	142403104,142354637,142345743,142343966,142331754,142330901,142318544,142315003,142314384,142300486,142284413,142279860,142274781,142269466	142403185,142354763,142345892,142344472,142331831,142330970,142318634,142315092,142314440,142300644,142284485,142280324,142274863,142271691	Gene ID= ENSG00000171045.14 TPM= 8.17 Transcript Type= NA
chr8	142269482	142403255	142269482	142403255	-	transcript4288.chr8.nnic@TSNARE1	transcript4288.chr8.nnic	protein_coding	142403104,142354637,142345743,142343966,142331754,142330901,142318544,142315003,142314384,142300486,142284413,142279860,142269482	142403255,142354763,142345892,142344472,142331831,142330970,142318634,142315092,142314440,142300644,142284485,142280324,142271691	Gene ID= ENSG00000171045.14 TPM= 2.34 Transcript Type= NA
chr8	142270475	142403136	142270475	142403136	-	transcript4293.chr8.nnic@TSNARE1	transcript4293.chr8.nnic	protein_coding	142403104,142354637,142331754,142330901,142318544,142315003,142314384,142300486,142284413,142279860,142274781,142270475	142403136,142354763,142331831,142330970,142318634,142315092,142314440,142300644,142284485,142280324,142274863,142271691	Gene ID= ENSG00000171045.14 TPM= 7.01 Transcript Type= NA
chr8	142270475	142278683	142270475	142278683	-	transcript4302.chr8.nic@TSNARE1	transcript4302.chr8.nic	protein_coding	142274781,142270475	142278683,142271691	Gene ID= ENSG00000171045.14 TPM= 2.34 Transcript Type= NA
chr8	142611044	142614472	142611044	142614472	-	ENST00000356613.3@ARC	ENST00000356613.3	protein_coding	142612484,142612108,142611044	142614472,142612252,142611857	Gene ID= ENSG00000198576.3 TPM= 56.04 Transcript Type= protein_coding
chr8	142652254	142660223	142652254	142660223	-	transcript4308.chr8.nnic@NA	transcript4308.chr8.nnic	NA	142652254	142660223	Gene ID= novel_gene_chr8_4309 TPM= 3.5 Transcript Type= NA
chr8	142658393	142663891	142658393	142663891	-	transcript4306.chr8.nnic@NA	transcript4306.chr8.nnic	NA	142658393	142663891	Gene ID= novel_gene_chr8_4307 TPM= 8.17 Transcript Type= NA
chr8	142727224	142736927	142727224	142736927	+	transcript4311.chr8.nnic@THEM6	transcript4311.chr8.nnic	protein_coding	142727224,142735326	142727700,142736927	Gene ID= ENSG00000130193.7 TPM= 12.26 Transcript Type= NA
chr8	142727203	142736927	142727203	142736927	+	ENST00000336138.3@THEM6	ENST00000336138.3	protein_coding	142727203,142735326	142727859,142736927	Gene ID= ENSG00000130193.7 TPM= 171.05 Transcript Type= protein_coding
chr8	142732278	142736925	142732278	142736925	+	transcript4314.chr8.nnic@NA	transcript4314.chr8.nnic	NA	142732278	142736925	Gene ID= novel_gene_chr8_4315 TPM= 3.5 Transcript Type= NA
chr8	142774979	142777861	142774979	142777861	-	transcript4317.chr8.nnic@LYNX1	transcript4317.chr8.nnic	protein_coding	142777541,142776444,142775906,142775593,142774979	142777861,142777436,142776121,142775694,142775363	Gene ID= ENSG00000180155.19 TPM= 4.67 Transcript Type= NA
chr8	142980288	142981204	142980288	142981204	-	transcript4318.chr8.nnic@NA	transcript4318.chr8.nnic	NA	142980288	142981204	Gene ID= novel_gene_chr8_4319 TPM= 2.34 Transcript Type= NA
chr8	143018483	143022410	143018483	143022410	+	ENST00000429120.6@LY6E	ENST00000429120.6	protein_coding	143018483,143020888,143021314,143021566	143018586,143020991,143021433,143022410	Gene ID= ENSG00000160932.10 TPM= 109.37 Transcript Type= protein_coding
chr8	143018528	143022409	143018528	143022409	+	ENST00000520466.5@LY6E	ENST00000520466.5	protein_coding	143018528,143018833,143020883,143021314,143021566	143018586,143019119,143020991,143021433,143022409	Gene ID= ENSG00000160932.10 TPM= 27.64 Transcript Type= protein_coding
chr8	143018546	143022409	143018546	143022409	+	ENST00000521182.5@LY6E	ENST00000521182.5	protein_coding	143018546,143020883,143021349,143021566	143018586,143020991,143021433,143022409	Gene ID= ENSG00000160932.10 TPM= 22.97 Transcript Type= protein_coding
chr8	143213193	143217170	143213193	143217170	+	ENST00000622500.1@GPIHBP1	ENST00000622500.1	protein_coding	143213193,143213822,143215013,143215259	143213319,143213950,143215126,143217170	Gene ID= ENSG00000277494.1 TPM= 25.69 Transcript Type= protein_coding
chr8	143246821	143253591	143246821	143253591	+	ENST00000520584.5@ZFP41	ENST00000520584.5	protein_coding	143246821,143249690,143252888	143247749,143251340,143253591	Gene ID= ENSG00000181638.17 TPM= 4.67 Transcript Type= protein_coding
chr8	143246965	143276931	143246965	143276931	+	transcript4348.chr8.nic@AC138696.1	transcript4348.chr8.nic	protein_coding	143246965,143249690,143274704,143275897	143247142,143251340,143274802,143276931	Gene ID= ENSG00000264668.1 TPM= 2.34 Transcript Type= NA
chr8	143267437	143276929	143267437	143276929	+	ENST00000340042.1@GLI4	ENST00000340042.1	protein_coding	143267437,143269360,143274704,143275897	143267484,143269520,143274802,143276929	Gene ID= ENSG00000250571.6 TPM= 14.01 Transcript Type= protein_coding
chr8	143274599	143276931	143274599	143276931	+	ENST00000523812.1@GLI4	ENST00000523812.1	protein_coding	143274599	143276931	Gene ID= ENSG00000250571.6 TPM= 4.67 Transcript Type= processed_transcript
chr8	143269358	143276931	143269358	143276931	+	ENST00000523522.5@GLI4	ENST00000523522.5	protein_coding	143269358,143274704,143275897	143269520,143274802,143276931	Gene ID= ENSG00000250571.6 TPM= 8.17 Transcript Type= protein_coding
chr8	143280828	143281690	143280828	143281690	-	ENST00000518073.1@MINCR	ENST00000518073.1	antisense_RNA	143281482,143280828	143281690,143280997	Gene ID= ENSG00000253716.5 TPM= 3.5 Transcript Type= antisense_RNA
chr8	143280166	143281660	143280166	143281660	-	ENST00000517411.1@MINCR	ENST00000517411.1	antisense_RNA	143281482,143280882,143280166	143281660,143280997,143280515	Gene ID= ENSG00000253716.5 TPM= 1.17 Transcript Type= antisense_RNA
chr8	143291389	143298061	143291389	143298061	+	ENST00000330143.7@ZNF696	ENST00000330143.7	protein_coding	143291389,143292972,143295740	143291767,143293065,143298061	Gene ID= ENSG00000185730.7 TPM= 5.84 Transcript Type= protein_coding
chr8	143309324	143334896	143309324	143334896	-	ENST00000329245.8@TOP1MT	ENST00000329245.8	protein_coding	143334740,143331224,143329350,143326222,143325346,143324485,143323999,143321201,143318018,143317723,143315999,143315727,143310068,143309324	143334896,143331339,143329471,143326344,143325533,143324629,143324142,143321386,143318086,143317837,143316126,143315821,143310217,143309543	Gene ID= ENSG00000184428.12 TPM= 25.69 Transcript Type= protein_coding
chr8	143368822	143382779	143368822	143382779	+	transcript4388.chr8.nnic@RHPN1	transcript4388.chr8.nnic	protein_coding	143368822,143375553,143376525,143377380,143378269,143378696,143378912,143379315,143379829,143380065,143380589,143381572,143381807,143382436	143369047,143375668,143376653,143377455,143378346,143378820,143379078,143379508,143379985,143380175,143380783,143381718,143381968,143382779	Gene ID= ENSG00000158106.13 TPM= 3.5 Transcript Type= NA
chr8	143437655	143541453	143437655	143541453	-	ENST00000262577.5@ZC3H3	ENST00000262577.5	protein_coding	143541376,143538003,143536257,143507746,143475398,143468617,143468382,143468209,143465717,143440936,143440041,143437655	143541453,143539320,143536453,143507899,143475585,143468659,143468540,143468278,143465848,143441120,143440363,143438087	Gene ID= ENSG00000014164.6 TPM= 49.04 Transcript Type= protein_coding
chr8	143553207	143563062	143553207	143563062	+	ENST00000526406.5@GSDMD	ENST00000526406.5	protein_coding	143553207,143555059,143555934,143558362,143559332,143559777,143560603,143561002,143561370,143561742,143561959,143562209,143562448,143562662	143553760,143555196,143556030,143558451,143559552,143559969,143560771,143561104,143561423,143561828,143562131,143562350,143562521,143563062	Gene ID= ENSG00000104518.10 TPM= 45.56 Transcript Type= protein_coding
chr8	143558292	143563062	143558292	143563062	+	transcript4409.chr8.nic@GSDMD	transcript4409.chr8.nic	protein_coding	143558292,143559332,143559777,143560603,143561370,143561742,143561959,143562209,143562448,143562662	143558451,143559552,143559969,143561104,143561423,143561828,143562131,143562350,143562521,143563062	Gene ID= ENSG00000104518.10 TPM= 13.65 Transcript Type= NA
chr8	143558292	143563062	143558292	143563062	+	transcript4410.chr8.nic@GSDMD	transcript4410.chr8.nic	protein_coding	143558292,143559332,143559777,143561002,143561370,143561742,143561959,143562209,143562448,143562662	143558451,143559552,143560771,143561104,143561423,143561828,143562131,143562350,143562521,143563062	Gene ID= ENSG00000104518.10 TPM= 22.41 Transcript Type= NA
chr8	143558292	143563062	143558292	143563062	+	transcript4412.chr8.nic@GSDMD	transcript4412.chr8.nic	protein_coding	143558292,143559332,143559777,143561370,143561742,143561959,143562209,143562448,143562662	143558451,143559552,143561104,143561423,143561828,143562131,143562350,143562521,143563062	Gene ID= ENSG00000104518.10 TPM= 30.58 Transcript Type= NA
chr8	143558292	143563062	143558292	143563062	+	transcript4414.chr8.nic@GSDMD	transcript4414.chr8.nic	protein_coding	143558292,143559332,143559777,143561742,143561959,143562209,143562448,143562662	143558451,143559552,143561423,143561828,143562131,143562350,143562521,143563062	Gene ID= ENSG00000104518.10 TPM= 28.49 Transcript Type= NA
chr8	143558307	143563062	143558307	143563062	+	ENST00000262580.8@GSDMD	ENST00000262580.8	protein_coding	143558307,143559332,143559777,143560603,143561002,143561370,143561742,143561959,143562209,143562448,143562662	143558451,143559552,143559969,143560771,143561104,143561423,143561828,143562131,143562350,143562521,143563062	Gene ID= ENSG00000104518.10 TPM= 119.12 Transcript Type= protein_coding
chr8	143556822	143558285	143556822	143558285	-	transcript4419.chr8.nnic@NA	transcript4419.chr8.nnic	NA	143556822	143558285	Gene ID= novel_gene_chr8_4420 TPM= 4.67 Transcript Type= NA
chr8	143566192	143568757	143566192	143568757	-	ENST00000533210.5@MROH6	ENST00000533210.5	protein_coding	143567786,143567611,143566192	143568757,143567676,143567465	Gene ID= ENSG00000204839.8 TPM= 3.5 Transcript Type= retained_intron
chr8	143574787	143578334	143574787	143578334	-	transcript4437.chr8.nic@NAPRT	transcript4437.chr8.nic	protein_coding	143578093,143577816,143577657,143577269,143577062,143576646,143576432,143576078,143575622,143575423,143574986,143574787	143578334,143577943,143577739,143577399,143577177,143576842,143576572,143576162,143575702,143575525,143575345,143574900	Gene ID= ENSG00000147813.15 TPM= 6.14 Transcript Type= NA
chr8	143574785	143578613	143574785	143578613	-	ENST00000449291.6@NAPRT	ENST00000449291.6	protein_coding	143578093,143577816,143577657,143577269,143577062,143576646,143576432,143576078,143575622,143575423,143575191,143574986,143574785	143578613,143577943,143577739,143577399,143577177,143576842,143576572,143576162,143575702,143575525,143575345,143575093,143574900	Gene ID= ENSG00000147813.15 TPM= 154.43 Transcript Type= protein_coding
chr8	143574785	143578343	143574785	143578343	-	ENST00000435154.7@NAPRT	ENST00000435154.7	protein_coding	143578093,143577816,143577657,143577269,143577062,143576646,143576432,143576078,143575622,143575423,143574785	143578343,143577943,143577739,143577399,143577177,143576842,143576572,143576162,143575702,143575525,143575345	Gene ID= ENSG00000147813.15 TPM= 8.27 Transcript Type= protein_coding
chr8	143574787	143578343	143574787	143578343	-	ENST00000426292.7@NAPRT	ENST00000426292.7	protein_coding	143578093,143577816,143577657,143577269,143577062,143576646,143576432,143576078,143575622,143575423,143575230,143574986,143574787	143578343,143577943,143577739,143577399,143577177,143576842,143576572,143576162,143575702,143575525,143575345,143575093,143574900	Gene ID= ENSG00000147813.15 TPM= 2.64 Transcript Type= protein_coding
chr8	143579728	143597415	143579728	143597415	-	ENST00000442189.6@EEF1D	ENST00000442189.6	protein_coding	143597348,143590608,143588991,143586729,143586219,143581229,143581054,143580506,143580012,143579728	143597415,143590738,143590081,143586852,143586290,143581328,143581154,143580727,143580206,143579830	Gene ID= ENSG00000104529.17 TPM= 48.05 Transcript Type= protein_coding
chr8	143579697	143597675	143579697	143597675	-	ENST00000423316.6@EEF1D	ENST00000423316.6	protein_coding	143597348,143588991,143586729,143586219,143581229,143581054,143580506,143580012,143579697	143597675,143590092,143586852,143586290,143581328,143581154,143580727,143580206,143579830	Gene ID= ENSG00000104529.17 TPM= 25.86 Transcript Type= protein_coding
chr8	143579697	143597388	143579697	143597388	-	ENST00000317198.10@EEF1D	ENST00000317198.10	protein_coding	143596879,143586729,143586219,143581229,143581054,143580506,143580012,143579697	143597388,143586852,143586290,143581328,143581154,143580727,143580206,143579830	Gene ID= ENSG00000104529.17 TPM= 17.4 Transcript Type= protein_coding
chr8	143579728	143597679	143579728	143597679	-	ENST00000395119.7@EEF1D	ENST00000395119.7	protein_coding	143597348,143586729,143586219,143581229,143581054,143580506,143580012,143579728	143597679,143586852,143586290,143581328,143581154,143580727,143580206,143579830	Gene ID= ENSG00000104529.17 TPM= 421.38 Transcript Type= protein_coding
chr8	143579728	143580740	143579728	143580740	-	ENST00000530109.5@EEF1D	ENST00000530109.5	protein_coding	143580506,143580012,143579728	143580740,143580206,143579830	Gene ID= ENSG00000104529.17 TPM= 15.89 Transcript Type= protein_coding
chr8	143579728	143597425	143579728	143597425	-	ENST00000528610.5@EEF1D	ENST00000528610.5	protein_coding	143597348,143586729,143581229,143581054,143580506,143580012,143579728	143597425,143586852,143581328,143581154,143580727,143580206,143579830	Gene ID= ENSG00000104529.17 TPM= 47.94 Transcript Type= protein_coding
chr8	143579729	143597387	143579729	143597387	-	ENST00000529007.5@EEF1D	ENST00000529007.5	protein_coding	143597348,143586729,143586219,143581229,143581054,143580506,143580012,143579729	143597387,143586852,143586290,143581328,143581154,143580632,143580206,143579830	Gene ID= ENSG00000104529.17 TPM= 3.79 Transcript Type= nonsense_mediated_decay
chr8	143579728	143597413	143579728	143597413	-	ENST00000526838.5@EEF1D	ENST00000526838.5	protein_coding	143597348,143586729,143586219,143581286,143581054,143580506,143580012,143579728	143597413,143586852,143586290,143581328,143581154,143580727,143580206,143579830	Gene ID= ENSG00000104529.17 TPM= 3.28 Transcript Type= protein_coding
chr8	143582272	143584413	143582272	143584413	+	transcript4503.chr8.nnic@NA	transcript4503.chr8.nnic	NA	143582272	143584413	Gene ID= novel_gene_chr8_4504 TPM= 43.2 Transcript Type= NA
chr8	143597827	143600314	143597827	143600314	+	transcript4505.chr8.nnic@NA	transcript4505.chr8.nnic	NA	143597827	143600314	Gene ID= novel_gene_chr8_4506 TPM= 31.53 Transcript Type= NA
chr8	143603913	143609614	143603913	143609614	-	ENST00000220966.10@PYCR3	ENST00000220966.10	protein_coding	143609458,143608062,143606953,143606467,143606062,143603913	143609614,143608126,143607132,143606679,143606154,143605882	Gene ID= ENSG00000104524.13 TPM= 3.5 Transcript Type= protein_coding
chr8	143604219	143609574	143604219	143609574	-	ENST00000495276.5@PYCR3	ENST00000495276.5	protein_coding	143609458,143608062,143606953,143606467,143606062,143604219	143609574,143608126,143607132,143606679,143606154,143605882	Gene ID= ENSG00000104524.13 TPM= 18.68 Transcript Type= protein_coding
chr8	143612616	143617507	143612616	143617507	-	transcript4521.chr8.nnic@NA	transcript4521.chr8.nnic	NA	143612616	143617507	Gene ID= novel_gene_chr8_4522 TPM= 3.5 Transcript Type= NA
chr8	143612618	143632783	143612618	143632783	-	transcript4517.chr8.nnic@TSTA3	transcript4517.chr8.nnic	protein_coding	143632734,143616567,143616106,143614787,143614624,143614320,143614164,143613751,143613524,143613196,143612618	143632783,143616723,143616220,143614915,143614697,143614453,143614228,143613817,143613603,143613295,143612965	Gene ID= ENSG00000104522.15 TPM= 10.1 Transcript Type= NA
chr8	143612618	143617562	143612618	143617562	-	transcript4518.chr8.nic@TSTA3	transcript4518.chr8.nic	protein_coding	143617428,143616567,143616106,143614787,143614320,143614164,143613751,143613524,143613196,143612618	143617562,143616723,143616220,143614915,143614697,143614228,143613817,143613603,143613295,143612965	Gene ID= ENSG00000104522.15 TPM= 10.98 Transcript Type= NA
chr8	143612618	143617566	143612618	143617566	-	ENST00000425753.6@TSTA3	ENST00000425753.6	protein_coding	143617474,143616567,143616106,143614787,143614624,143614320,143614164,143613751,143613524,143613196,143612618	143617566,143616723,143616220,143614915,143614697,143614453,143614228,143613817,143613603,143613295,143612965	Gene ID= ENSG00000104522.15 TPM= 60.31 Transcript Type= protein_coding
chr8	143612618	143617482	143612618	143617482	-	ENST00000529064.5@TSTA3	ENST00000529064.5	protein_coding	143617428,143616567,143616106,143614787,143614624,143614320,143614164,143613751,143613524,143613196,143612618	143617482,143616723,143616220,143614915,143614697,143614453,143614228,143613817,143613603,143613295,143612965	Gene ID= ENSG00000104522.15 TPM= 13.6 Transcript Type= protein_coding
chr8	143636013	143652376	143636013	143652376	+	ENST00000526926.5@ZNF623	ENST00000526926.5	protein_coding	143636013,143649898	143636145,143652376	Gene ID= ENSG00000183309.11 TPM= 11.68 Transcript Type= protein_coding
chr8	143684452	143695384	143684452	143695384	+	transcript4530.chr8.nic@ZNF707	transcript4530.chr8.nic	protein_coding	143684452,143689204,143690057,143691073,143691600,143692245,143693671	143684542,143689301,143690123,143691199,143691713,143692330,143695384	Gene ID= ENSG00000181135.15 TPM= 4.67 Transcript Type= NA
chr8	143684481	143695385	143684481	143695385	+	ENST00000358656.8@ZNF707	ENST00000358656.8	protein_coding	143684481,143689204,143690057,143691073,143691600,143693671	143684542,143689301,143690123,143691199,143691713,143695385	Gene ID= ENSG00000181135.15 TPM= 3.5 Transcript Type= protein_coding
chr8	143716314	143722458	143716314	143722458	+	transcript4538.chr8.nic@MAPK15	transcript4538.chr8.nic	protein_coding	143716314,143717694,143718047,143718212,143718775,143718993,143719343,143721000,143721231,143721549,143721752,143722075	143716443,143717792,143718076,143718302,143718905,143719156,143720840,143721105,143721411,143721673,143721880,143722458	Gene ID= ENSG00000181085.14 TPM= 2.34 Transcript Type= NA
chr8	143725368	143740697	143725368	143740697	-	transcript4544.chr8.nnic@FAM83H	transcript4544.chr8.nnic	protein_coding	143740230,143730136,143729159,143728967,143725368	143740697,143730597,143729323,143729091,143728723	Gene ID= ENSG00000180921.6 TPM= 4.09 Transcript Type= NA
chr8	143723933	143733801	143723933	143733801	-	ENST00000388913.3@FAM83H	ENST00000388913.3	protein_coding	143733691,143730136,143729159,143728967,143723933	143733801,143730597,143729323,143729091,143728723	Gene ID= ENSG00000180921.6 TPM= 53.13 Transcript Type= protein_coding
chr8	143739403	143746336	143739403	143746336	+	transcript4548.chr8.nic@IQANK1	transcript4548.chr8.nic	protein_coding	143739403,143741752	143739948,143746336	Gene ID= ENSG00000203499.11 TPM= 9.34 Transcript Type= NA
chr8	143790925	143815785	143790925	143815785	-	transcript4552.chr8.nic@SCRIB	transcript4552.chr8.nic	protein_coding	143815214,143814001,143813818,143813637,143813470,143813311,143813030,143812817,143812266,143811146,143810906,143810686,143810479,143809551,143808609,143806924,143806407,143805112,143804934,143804568,143804046,143803647,143803383,143795420,143795277,143795038,143793900,143792976,143792708,143792485,143792220,143791991,143791876,143791666,143791389,143790925	143815785,143814118,143813896,143813726,143813526,143813374,143813104,143812961,143812384,143811345,143811072,143810816,143810604,143809718,143809025,143807013,143806484,143805435,143805014,143804825,143804156,143803940,143803571,143795530,143795333,143795112,143793962,143793083,143792867,143792635,143792405,143792133,143791913,143791740,143791440,143791308	Gene ID= ENSG00000180900.18 TPM= 18.68 Transcript Type= NA
chr8	143790925	143815785	143790925	143815785	-	transcript4558.chr8.nic@SCRIB	transcript4558.chr8.nic	protein_coding	143815214,143814001,143813818,143813637,143813470,143813311,143813030,143812817,143812266,143811146,143810906,143810686,143810479,143809551,143808609,143806924,143806407,143805112,143804934,143804568,143804046,143803647,143803383,143795420,143795277,143795038,143793900,143792976,143792708,143792485,143792220,143791991,143791876,143791389,143790925	143815785,143814118,143813896,143813726,143813526,143813374,143813104,143812961,143812384,143811345,143811072,143810816,143810604,143809718,143809025,143807013,143806484,143805435,143805014,143804825,143804156,143803940,143803571,143795530,143795333,143795112,143793962,143793083,143792867,143792635,143792405,143792133,143791913,143791440,143791308	Gene ID= ENSG00000180900.18 TPM= 79.4 Transcript Type= NA
chr8	143790925	143793525	143790925	143793525	-	transcript4606.chr8.nic@SCRIB	transcript4606.chr8.nic	protein_coding	143792976,143792708,143792485,143792220,143791991,143791876,143791389,143790925	143793525,143792867,143792635,143792405,143792133,143791913,143791440,143791308	Gene ID= ENSG00000180900.18 TPM= 8.17 Transcript Type= NA
chr8	143790925	143791542	143790925	143791542	-	ENST00000531163.5@SCRIB	ENST00000531163.5	protein_coding	143791389,143790925	143791542,143791308	Gene ID= ENSG00000180900.18 TPM= 2.34 Transcript Type= retained_intron
chr8	143816377	143829039	143816377	143829039	-	ENST00000313352.11@PUF60	ENST00000313352.11	protein_coding	143828984,143824313,143821818,143821597,143818373,143818193,143817862,143817592,143817331,143816910,143816377	143829039,143824399,143821913,143821686,143818534,143818285,143818075,143817782,143817466,143817145,143816819	Gene ID= ENSG00000179950.13 TPM= 13.43 Transcript Type= protein_coding
chr8	143816377	143829352	143816377	143829352	-	ENST00000349157.10@PUF60	ENST00000349157.10	protein_coding	143829280,143824313,143821818,143821597,143818373,143818193,143817862,143817592,143817331,143816910,143816377	143829352,143824399,143821913,143821686,143818534,143818285,143818075,143817782,143817466,143817145,143816819	Gene ID= ENSG00000179950.13 TPM= 137.19 Transcript Type= protein_coding
chr8	143816377	143829303	143816377	143829303	-	ENST00000456095.6@PUF60	ENST00000456095.6	protein_coding	143829280,143821818,143821597,143820666,143818373,143818193,143817862,143817592,143817331,143816910,143816377	143829303,143821913,143821686,143820716,143818534,143818285,143818075,143817782,143817466,143817145,143816819	Gene ID= ENSG00000179950.13 TPM= 22.97 Transcript Type= protein_coding
chr8	143816377	143829026	143816377	143829026	-	ENST00000453551.6@PUF60	ENST00000453551.6	protein_coding	143828984,143824313,143821818,143821597,143820666,143818373,143818193,143817862,143817592,143817331,143816910,143816377	143829026,143824399,143821913,143821686,143820716,143818534,143818285,143818075,143817782,143817466,143817145,143816819	Gene ID= ENSG00000179950.13 TPM= 16.54 Transcript Type= protein_coding
chr8	143833721	143841075	143833721	143841075	-	transcript4578.chr8.nic@NRBP2	transcript4578.chr8.nic	protein_coding	143840706,143840107,143839929,143839509,143839314,143839172,143839017,143838883,143838680,143837623,143837407,143837249,143837039,143836127,143835967,143833721	143841075,143840229,143840030,143839825,143839408,143839195,143839100,143838938,143838775,143837755,143837509,143837299,143837174,143836180,143836030,143835875	Gene ID= ENSG00000185189.17 TPM= 8.66 Transcript Type= NA
chr8	143833594	143840951	143833594	143840951	-	ENST00000533093.5@NRBP2	ENST00000533093.5	protein_coding	143840706,143840107,143839929,143839509,143839314,143839172,143839017,143838883,143838680,143837623,143837407,143837249,143837039,143836127,143835967,143835820,143833594	143840951,143840229,143840030,143839825,143839408,143839195,143839100,143838938,143838775,143837755,143837509,143837299,143837174,143836180,143836030,143835875,143835730	Gene ID= ENSG00000185189.17 TPM= 5.74 Transcript Type= retained_intron
chr8	143833721	143840974	143833721	143840974	-	ENST00000442628.6@NRBP2	ENST00000442628.6	protein_coding	143840706,143840107,143839929,143839736,143839509,143839314,143839172,143839017,143838883,143838680,143837623,143837407,143837249,143837039,143836127,143835967,143835820,143833721	143840974,143840229,143840030,143839825,143839549,143839408,143839195,143839100,143838938,143838775,143837755,143837509,143837299,143837174,143836180,143836030,143835875,143835730	Gene ID= ENSG00000185189.17 TPM= 11 Transcript Type= protein_coding
chr8	143857324	143878464	143857324	143878464	-	ENST00000615648.1@EPPK1	ENST00000615648.1	protein_coding	143878438,143857324	143878464,143873298	Gene ID= ENSG00000261150.2 TPM= 131.94 Transcript Type= protein_coding
chr8	143977160	143986454	143977160	143986454	-	ENST00000313028.11@PARP10	ENST00000313028.11	protein_coding	143986358,143986055,143985721,143985412,143984544,143984210,143984008,143983167,143982932,143977907,143977160	143986454,143986233,143985975,143985648,143985328,143984431,143984104,143983811,143983065,143978081,143977830	Gene ID= ENSG00000178685.13 TPM= 185.54 Transcript Type= protein_coding
chr8	143977153	143986446	143977153	143986446	-	ENST00000524918.5@PARP10	ENST00000524918.5	protein_coding	143986358,143986055,143985721,143985412,143984544,143984210,143984035,143983167,143982932,143977907,143977153	143986446,143986233,143985975,143985648,143985328,143984431,143984104,143983811,143983065,143978081,143977830	Gene ID= ENSG00000178685.13 TPM= 19.51 Transcript Type= protein_coding
chr8	143990058	143993415	143990058	143993415	+	ENST00000313269.5@GRINA	ENST00000313269.5	protein_coding	143990058,143991200,143991692,143991878,143992245,143992465,143992692	143990311,143991602,143991804,143992078,143992373,143992608,143993415	Gene ID= ENSG00000178719.16 TPM= 44.37 Transcript Type= protein_coding
chr8	143990100	143993415	143990100	143993415	+	ENST00000395068.8@GRINA	ENST00000395068.8	protein_coding	143990100,143991200,143991692,143991878,143992245,143992465,143992692	143990199,143991602,143991804,143992078,143992373,143992608,143993415	Gene ID= ENSG00000178719.16 TPM= 87.57 Transcript Type= protein_coding
chr8	144051266	144060739	144051266	144060739	-	transcript4635.chr8.nic@OPLAH	transcript4635.chr8.nic	protein_coding	144060653,144059862,144059599,144058980,144058773,144058496,144058239,144058010,144057856,144057448,144057208,144056948,144056618,144056385,144056147,144055788,144055029,144054812,144054561,144052983,144052766,144052449,144052169,144051916,144051729,144051266	144060739,144060085,144059790,144059079,144058896,144058691,144058404,144058148,144057923,144057713,144057320,144057118,144056755,144056523,144056259,144055939,144055189,144054913,144054735,144053393,144052900,144052598,144052326,144052076,144051826,144051472	Gene ID= ENSG00000178814.16 TPM= 3.5 Transcript Type= NA
chr8	144051266	144060739	144051266	144060739	-	transcript4637.chr8.nic@OPLAH	transcript4637.chr8.nic	protein_coding	144060653,144059862,144059599,144058980,144058773,144058496,144058239,144058010,144057856,144057448,144057208,144056948,144056618,144056385,144056147,144055788,144055029,144054812,144054561,144053209,144052983,144052766,144052169,144051916,144051729,144051266	144060739,144060085,144059790,144059079,144058896,144058691,144058404,144058148,144057923,144057713,144057320,144057118,144056755,144056523,144056259,144055939,144055189,144054913,144054735,144053393,144053129,144052900,144052598,144052076,144051826,144051472	Gene ID= ENSG00000178814.16 TPM= 5.84 Transcript Type= NA
chr8	144051266	144060739	144051266	144060739	-	transcript4646.chr8.nnic@OPLAH	transcript4646.chr8.nnic	protein_coding	144060653,144059962,144058239,144058010,144057856,144057448,144057208,144056948,144056618,144056385,144056147,144055788,144055029,144054812,144054561,144052983,144052766,144052169,144051729,144051266	144060739,144060085,144058404,144058148,144057923,144057713,144057320,144057118,144056755,144056523,144056259,144055939,144055189,144054913,144054735,144053393,144052900,144052598,144052076,144051472	Gene ID= ENSG00000178814.16 TPM= 2.34 Transcript Type= NA
chr8	144051266	144060703	144051266	144060703	-	ENST00000618853.4@OPLAH	ENST00000618853.4	protein_coding	144060653,144059862,144059599,144058980,144058773,144058496,144058239,144058010,144057856,144057448,144057208,144056948,144056618,144056385,144056147,144055788,144055029,144054812,144054561,144053209,144052983,144052766,144052449,144052169,144051916,144051729,144051266	144060703,144060085,144059790,144059079,144058896,144058691,144058404,144058148,144057923,144057713,144057320,144057118,144056755,144056523,144056259,144055939,144055189,144054913,144054735,144053393,144053129,144052900,144052598,144052326,144052076,144051826,144051472	Gene ID= ENSG00000178814.16 TPM= 32.69 Transcript Type= protein_coding
chr8	144078626	144080647	144078626	144080647	+	ENST00000316052.5@EXOSC4	ENST00000316052.5	protein_coding	144078626,144079943,144080242	144078899,144080149,144080647	Gene ID= ENSG00000178896.8 TPM= 32.69 Transcript Type= protein_coding
chr8	144082595	144086216	144082595	144086216	+	transcript4653.chr8.nnic@GPAA1	transcript4653.chr8.nnic	protein_coding	144082595,144083124,144083389,144083714,144083939,144084134,144084455,144084722,144085043,144085289,144085573,144085882	144082804,144083303,144083500,144083861,144084040,144084330,144084609,144084875,144085138,144085479,144085743,144086216	Gene ID= ENSG00000197858.10 TPM= 10.61 Transcript Type= NA
chr8	144082595	144086216	144082595	144086216	+	transcript4661.chr8.nic@GPAA1	transcript4661.chr8.nic	protein_coding	144082595,144083124,144083389,144083939,144084134,144084413,144084722,144085043,144085289,144085573,144085882	144082804,144083303,144083861,144084040,144084330,144084609,144084875,144085138,144085479,144085743,144086216	Gene ID= ENSG00000197858.10 TPM= 25.5 Transcript Type= NA
chr8	144082610	144086216	144082610	144086216	+	ENST00000355091.8@GPAA1	ENST00000355091.8	protein_coding	144082610,144083124,144083389,144083714,144083939,144084134,144084413,144084722,144085043,144085289,144085573,144085882	144082804,144083303,144083500,144083861,144084040,144084330,144084609,144084875,144085138,144085479,144085743,144086216	Gene ID= ENSG00000197858.10 TPM= 209.4 Transcript Type= protein_coding
chr8	144082668	144086216	144082668	144086216	+	ENST00000361036.10@GPAA1	ENST00000361036.10	protein_coding	144082668,144083389,144083714,144083939,144084134,144084413,144084722,144085043,144085289,144085573,144085882	144082804,144083500,144083861,144084040,144084330,144084609,144084875,144085138,144085479,144085743,144086216	Gene ID= ENSG00000197858.10 TPM= 7.4 Transcript Type= protein_coding
chr8	144095027	144097525	144095027	144097525	+	ENST00000318911.4@CYC1	ENST00000318911.4	protein_coding	144095027,144095833,144096124,144096337,144096584,144097034,144097232	144095228,144096029,144096250,144096494,144096744,144097134,144097525	Gene ID= ENSG00000179091.4 TPM= 305.38 Transcript Type= protein_coding
chr8	144095039	144097525	144095039	144097525	+	ENST00000533444.1@CYC1	ENST00000533444.1	protein_coding	144095039,144096124,144096337,144096584,144097034,144097232	144096029,144096250,144096494,144096744,144097134,144097525	Gene ID= ENSG00000179091.4 TPM= 77.12 Transcript Type= retained_intron
chr8	144098637	144104905	144098637	144104905	-	transcript4699.chr8.nic@SHARPIN	transcript4699.chr8.nic	protein_coding	144103553,144103051,144099929,144099703,144099510,144099081,144098866,144098637	144104905,144103225,144100069,144099844,144099618,144099430,144098994,144098788	Gene ID= ENSG00000179526.16 TPM= 16.35 Transcript Type= NA
chr8	144098637	144104190	144098637	144104190	-	ENST00000398712.6@SHARPIN	ENST00000398712.6	protein_coding	144103553,144103051,144099929,144099703,144099510,144099277,144099081,144098866,144098637	144104190,144103225,144100069,144099844,144099618,144099430,144099205,144098994,144098788	Gene ID= ENSG00000179526.16 TPM= 161.51 Transcript Type= protein_coding
chr8	144098637	144104237	144098637	144104237	-	ENST00000359551.6@SHARPIN	ENST00000359551.6	protein_coding	144103553,144103051,144099929,144099703,144099510,144099277,144098866,144098637	144104237,144103225,144100069,144099844,144099618,144099430,144098994,144098788	Gene ID= ENSG00000179526.16 TPM= 8.56 Transcript Type= nonsense_mediated_decay
chr8	144104499	144107611	144104499	144107611	+	ENST00000322428.9@MAF1	ENST00000322428.9	protein_coding	144104499,144105640,144105869,144106076,144106343,144106555,144106835,144107088	144104858,144105766,144105997,144106241,144106464,144106674,144106963,144107611	Gene ID= ENSG00000179632.9 TPM= 308.88 Transcript Type= protein_coding
chr8	144104512	144107611	144104512	144107611	+	ENST00000534585.5@MAF1	ENST00000534585.5	protein_coding	144104512,144105640,144105869,144106076,144106343,144106835,144107088	144104858,144105766,144105997,144106241,144106674,144106963,144107611	Gene ID= ENSG00000179632.9 TPM= 18.14 Transcript Type= protein_coding
chr8	144114325	144116390	144114325	144116390	+	transcript4745.chr8.nic@WDR97	transcript4745.chr8.nic	protein_coding	144114325,144114554,144114749,144115341,144115943,144116091	144114475,144114675,144114911,144115858,144116013,144116390	Gene ID= ENSG00000179698.13 TPM= 3.5 Transcript Type= NA
chr8	144137785	144140713	144137785	144140713	+	transcript4749.chr8.nic@HGH1	transcript4749.chr8.nic	protein_coding	144137785,144138507,144138715,144139189,144139388	144138428,144138607,144139100,144139311,144140713	Gene ID= ENSG00000235173.6 TPM= 5.84 Transcript Type= NA
chr8	144137769	144140843	144137769	144140843	+	ENST00000347708.4@HGH1	ENST00000347708.4	protein_coding	144137769,144138507,144138715,144139009,144139189,144139388	144138428,144138607,144138813,144139100,144139311,144140843	Gene ID= ENSG00000235173.6 TPM= 15.18 Transcript Type= protein_coding
chr8	144148015	144261927	144148015	144261927	+	transcript4752.chr8.nnic@MROH1	transcript4752.chr8.nnic	protein_coding	144148015,144160970,144163771,144168295,144179455,144180178,144180425,144190784,144191715,144192309,144199122,144200428,144220600,144223108,144238756,144239035,144239323,144239614,144240101,144240570,144240992,144241395,144242369,144242602,144243494,144243863,144244222,144244444,144245156,144247301,144247567,144248877,144250212,144254813,144255509,144258777,144259240,144259911,144260186,144260483,144260677,144260907,144261114,144261284,144261655	144148076,144161089,144163848,144168440,144179586,144180340,144180523,144190935,144191855,144192401,144199200,144200541,144220673,144223230,144238863,144239179,144239363,144239755,144240153,144240677,144241111,144241517,144242515,144242628,144243616,144243942,144244336,144244539,144245260,144247436,144247679,144249029,144250366,144254978,144255705,144258914,144259354,144260057,144260374,144260544,144260832,144261041,144261216,144261349,144261927	Gene ID= ENSG00000179832.17 TPM= 4.92 Transcript Type= NA
chr8	144148015	144261927	144148015	144261927	+	transcript4754.chr8.nic@MROH1	transcript4754.chr8.nic	protein_coding	144148015,144160970,144163771,144168295,144179455,144180178,144180425,144190784,144191715,144192309,144199122,144200428,144220600,144223108,144238756,144239035,144239323,144239614,144240101,144240570,144240992,144241395,144242369,144242602,144243494,144243863,144244222,144244444,144245156,144247301,144247567,144248877,144250212,144254813,144255509,144258777,144259240,144259911,144260186,144260677,144260907,144261114,144261284,144261655	144148076,144161089,144163848,144168440,144179586,144180340,144180523,144190935,144191855,144192401,144199200,144200541,144220673,144223230,144238863,144239179,144239363,144239755,144240153,144240677,144241111,144241517,144242515,144242628,144243616,144243942,144244336,144244539,144245260,144247436,144247679,144249029,144250366,144254978,144255705,144258914,144259354,144260057,144260374,144260832,144261041,144261216,144261349,144261927	Gene ID= ENSG00000179832.17 TPM= 22.81 Transcript Type= NA
chr8	144148016	144261927	144148016	144261927	+	transcript4759.chr8.nic@MROH1	transcript4759.chr8.nic	protein_coding	144148016,144163771,144168295,144179455,144180178,144180425,144190784,144191715,144192309,144199122,144200428,144220600,144223108,144238756,144239035,144239323,144239614,144240101,144240570,144240992,144241395,144242369,144242602,144243494,144243863,144244222,144244444,144245156,144247301,144247567,144248877,144250212,144254813,144255509,144258777,144259240,144259911,144260186,144260677,144260907,144261114,144261284,144261655	144148076,144163848,144168440,144179586,144180340,144180523,144190935,144191855,144192401,144199200,144200541,144220673,144223230,144238863,144239179,144239363,144239755,144240153,144240677,144241111,144241517,144242515,144242628,144243616,144243942,144244336,144244539,144245260,144247436,144247679,144249029,144250366,144254978,144255705,144258914,144259354,144260057,144260374,144260832,144261041,144261216,144261349,144261927	Gene ID= ENSG00000179832.17 TPM= 16.68 Transcript Type= NA
chr8	144148015	144213474	144148015	144213474	+	transcript4773.chr8.nnic@MROH1	transcript4773.chr8.nnic	protein_coding	144148015,144160970,144163771,144168295,144179455,144180178,144180425,144190784,144191715,144192309,144199122,144200428,144211793	144148076,144161089,144163848,144168440,144179586,144180340,144180523,144190935,144191855,144192401,144199200,144200541,144213474	Gene ID= ENSG00000179832.17 TPM= 3.96 Transcript Type= NA
chr8	144148015	144213467	144148015	144213467	+	transcript4774.chr8.nic@MROH1	transcript4774.chr8.nic	protein_coding	144148015,144160970,144163771,144168295,144179455,144180178,144180425,144190784,144191715,144192309,144199122,144200428,144212994	144148076,144161089,144163848,144168440,144179586,144180340,144180523,144190935,144191855,144192401,144199200,144200541,144213467	Gene ID= ENSG00000179832.17 TPM= 2.79 Transcript Type= NA
chr8	144252459	144261927	144252459	144261927	+	transcript4788.chr8.nic@MROH1	transcript4788.chr8.nic	protein_coding	144252459,144255509,144258777,144259240,144259911,144260186,144260677,144261284,144261655	144254978,144255705,144258914,144259354,144260057,144260374,144261216,144261349,144261927	Gene ID= ENSG00000179832.17 TPM= 3.35 Transcript Type= NA
chr8	144252253	144261927	144252253	144261927	+	transcript4789.chr8.nic@MROH1	transcript4789.chr8.nic	protein_coding	144252253,144255509,144258777,144259911,144260186,144260907,144261114,144261284,144261655	144254978,144255705,144259354,144260057,144260832,144261041,144261216,144261349,144261927	Gene ID= ENSG00000179832.17 TPM= 5.92 Transcript Type= NA
chr8	144148036	144213467	144148036	144213467	+	ENST00000423230.6@MROH1	ENST00000423230.6	protein_coding	144148036,144163771,144168295,144179455,144180178,144180425,144190784,144191715,144192309,144199122,144200428,144212994	144148076,144163848,144168440,144179586,144180340,144180523,144190935,144191855,144192401,144199200,144200541,144213467	Gene ID= ENSG00000179832.17 TPM= 6 Transcript Type= protein_coding
chr8	144163770	144261940	144163770	144261940	+	ENST00000326134.9@MROH1	ENST00000326134.9	protein_coding	144163770,144168295,144179455,144180178,144180425,144190784,144191715,144192309,144199122,144200428,144220600,144223108,144238756,144239035,144239323,144239614,144240101,144240570,144240992,144241395,144242369,144242602,144243494,144243863,144244222,144244444,144245156,144247301,144247567,144248877,144250212,144254813,144255509,144258777,144259240,144259911,144260186,144260677,144260907,144261114,144261284,144261655	144163848,144168440,144179586,144180340,144180523,144190935,144191855,144192401,144199200,144200541,144220673,144223230,144238863,144239179,144239363,144239755,144240153,144240677,144241111,144241517,144242515,144242628,144243616,144243942,144244336,144244539,144245260,144247436,144247679,144249029,144250366,144254978,144255705,144258914,144259354,144260057,144260374,144260832,144261041,144261216,144261349,144261940	Gene ID= ENSG00000179832.17 TPM= 14.12 Transcript Type= protein_coding
chr8	144197997	144200418	144197997	144200418	-	transcript4793.chr8.nnic@NA	transcript4793.chr8.nnic	NA	144197997	144200418	Gene ID= novel_gene_chr8_4794 TPM= 2.34 Transcript Type= NA
chr8	144262102	144291370	144262102	144291370	-	ENST00000569669.5@BOP1	ENST00000569669.5	protein_coding	144291272,144289095,144276224,144264917,144264714,144264515,144264225,144263981,144263831,144263692,144263478,144263221,144262853,144262588,144262396,144262102	144291370,144289304,144276304,144265071,144264831,144264616,144264437,144264142,144263911,144263761,144263610,144263401,144263141,144262672,144262503,144262317	Gene ID= ENSG00000261236.7 TPM= 54.88 Transcript Type= protein_coding
chr8	144291588	144314716	144291588	144314716	+	transcript4813.chr8.nic@HSF1	transcript4813.chr8.nic	protein_coding	144291588,144308906,144309455,144309772,144311174,144311321,144311505,144311700,144311963,144312628,144313511,144313846,144313985,144314125	144291874,144309014,144309591,144309896,144311249,144311382,144311601,144311836,144312244,144312711,144313616,144313911,144314054,144314716	Gene ID= ENSG00000185122.10 TPM= 9.81 Transcript Type= NA
chr8	144291572	144314716	144291572	144314716	+	transcript4815.chr8.nnic@HSF1	transcript4815.chr8.nnic	protein_coding	144291572,144306548,144308906,144309455,144309772,144311174,144311321,144311505,144311700,144311963,144313511,144313846,144313985,144314125	144291874,144306767,144309014,144309591,144309896,144311249,144311382,144311601,144311836,144312244,144313616,144313911,144314054,144314716	Gene ID= ENSG00000185122.10 TPM= 14.17 Transcript Type= NA
chr8	144291584	144314716	144291584	144314716	+	transcript4822.chr8.nnic@HSF1	transcript4822.chr8.nnic	protein_coding	144291584,144308906,144309455,144309772,144311174,144311321,144311505,144311700,144311963,144313511,144313846,144313985,144314125	144291874,144309014,144309591,144309896,144311249,144311382,144311601,144311877,144312244,144313616,144313911,144314054,144314716	Gene ID= ENSG00000185122.10 TPM= 11.37 Transcript Type= NA
chr8	144291598	144314722	144291598	144314722	+	ENST00000528838.5@HSF1	ENST00000528838.5	protein_coding	144291598,144308906,144309455,144309772,144311174,144311321,144311505,144311700,144311963,144313511,144313846,144313985,144314125	144291874,144309014,144309591,144309896,144311249,144311382,144311601,144311836,144312244,144313616,144313911,144314054,144314722	Gene ID= ENSG00000185122.10 TPM= 234.45 Transcript Type= protein_coding
chr8	144314584	144326718	144314584	144326718	-	transcript4803.chr8.nic@DGAT1	transcript4803.chr8.nic	protein_coding	144326437,144321321,144319028,144318835,144318699,144318461,144318261,144318095,144317914,144317784,144317671,144317544,144317333,144317022,144316853,144314584	144326718,144321408,144319068,144318920,144318751,144318566,144318362,144318169,144318017,144317822,144317712,144317588,144317445,144317252,144316915,144316709	Gene ID= ENSG00000185000.11 TPM= 9.34 Transcript Type= NA
chr8	144316320	144326894	144316320	144326894	-	transcript4811.chr8.nic@DGAT1	transcript4811.chr8.nic	protein_coding	144326437,144321321,144319028,144318835,144318699,144318461,144318095,144317914,144317784,144317671,144317544,144317333,144317022,144316853,144316320	144326894,144321408,144319068,144318920,144318751,144318566,144318362,144318017,144317822,144317712,144317588,144317445,144317252,144316915,144316709	Gene ID= ENSG00000185000.11 TPM= 4.67 Transcript Type= NA
chr8	144355431	144359376	144355431	144359376	-	ENST00000530142.5@FBXL6	ENST00000530142.5	protein_coding	144359333,144357628,144356990,144356808,144356600,144356300,144355968,144355431	144359376,144359229,144357502,144356915,144356713,144356531,144356214,144355678	Gene ID= ENSG00000182325.10 TPM= 1.7 Transcript Type= retained_intron
chr8	144355431	144358543	144355431	144358543	-	transcript4850.chr8.nic@FBXL6	transcript4850.chr8.nic	protein_coding	144356990,144356808,144356600,144356300,144355968,144355431	144358543,144356915,144356713,144356531,144356214,144355678	Gene ID= ENSG00000182325.10 TPM= 36.73 Transcript Type= NA
chr8	144355431	144358555	144355431	144358555	-	transcript4862.chr8.nic@FBXL6	transcript4862.chr8.nic	protein_coding	144356808,144356300,144355968,144355431	144358555,144356713,144356214,144355678	Gene ID= ENSG00000182325.10 TPM= 9.48 Transcript Type= NA
chr8	144355431	144358512	144355431	144358512	-	ENST00000331890.5@FBXL6	ENST00000331890.5	protein_coding	144358032,144357628,144357439,144356990,144356808,144356600,144356300,144355968,144355431	144358512,144357786,144357502,144357121,144356915,144356713,144356531,144356214,144355678	Gene ID= ENSG00000182325.10 TPM= 35.17 Transcript Type= protein_coding
chr8	144355431	144358472	144355431	144358472	-	ENST00000455319.6@FBXL6	ENST00000455319.6	protein_coding	144358032,144357628,144357457,144356990,144356808,144356600,144356300,144355968,144355431	144358472,144357786,144357502,144357121,144356915,144356713,144356531,144356214,144355678	Gene ID= ENSG00000182325.10 TPM= 1.31 Transcript Type= protein_coding
chr8	144358557	144361270	144358557	144361270	+	ENST00000530047.5@SLC52A2	ENST00000530047.5	protein_coding	144358557,144359184,144359623,144360590,144360803	144358610,144359423,144360493,144360713,144361270	Gene ID= ENSG00000185803.8 TPM= 6.42 Transcript Type= protein_coding
chr8	144358593	144361272	144358593	144361272	+	ENST00000329994.6@SLC52A2	ENST00000329994.6	protein_coding	144358593,144359184,144359623,144360590,144360803	144358783,144359423,144360493,144360713,144361272	Gene ID= ENSG00000185803.8 TPM= 15.18 Transcript Type= protein_coding
chr8	144358593	144361241	144358593	144361241	+	ENST00000532887.5@SLC52A2	ENST00000532887.5	protein_coding	144358593,144359184,144359623,144360590,144360803	144359065,144359423,144360493,144360713,144361241	Gene ID= ENSG00000185803.8 TPM= 119.09 Transcript Type= protein_coding
chr8	144374052	144393236	144374052	144393236	+	ENST00000308860.10@ADCK5	ENST00000308860.10	protein_coding	144374052,144379387,144383081,144390671,144390856,144391134,144391361,144391580,144391783,144391941,144392092,144392254,144392445,144392776,144392969	144374107,144379490,144383230,144390746,144391056,144391274,144391474,144391711,144391866,144392022,144392170,144392345,144392697,144392892,144393236	Gene ID= ENSG00000173137.11 TPM= 11.68 Transcript Type= protein_coding
chr8	144374046	144393242	144374046	144393242	+	ENST00000529654.5@ADCK5	ENST00000529654.5	protein_coding	144374046,144379387,144383081,144390671,144390861,144391134,144391361,144391580,144391941,144392092,144392254,144392445,144392776,144392969	144374107,144379490,144383230,144390746,144391056,144391274,144391474,144391866,144392022,144392170,144392345,144392697,144392892,144393242	Gene ID= ENSG00000173137.11 TPM= 22.18 Transcript Type= nonsense_mediated_decay
chr8	144393231	144401021	144393231	144401021	-	transcript4879.chr8.nnic@CPSF1	transcript4879.chr8.nnic	protein_coding	144400924,144400671,144400354,144400166,144399992,144399781,144399588,144399452,144399276,144399128,144398958,144398779,144398525,144398302,144397954,144397743,144397487,144397207,144396840,144396598,144396348,144395435,144395265,144395098,144394882,144394644,144394379,144394234,144394113,144393883,144393667,144393452,144393231	144401021,144400873,144400493,144400276,144400085,144399868,144399710,144399503,144399373,144399202,144399038,144398868,144398638,144398443,144398132,144397879,144397661,144397413,144396929,144396741,144396500,144395551,144395355,144395182,144395023,144394796,144394555,144394300,144394160,144394038,144393796,144393590,144393365	Gene ID= ENSG00000071894.16 TPM= 4.09 Transcript Type= NA
chr8	144393231	144409349	144393231	144409349	-	ENST00000616140.1@CPSF1	ENST00000616140.1	protein_coding	144409289,144409015,144401646,144401430,144401211,144400924,144400671,144400354,144400166,144399992,144399781,144399588,144399452,144399276,144399128,144398958,144398779,144398525,144398302,144397954,144397743,144397487,144397207,144396840,144396598,144396348,144395435,144395265,144395098,144394882,144394644,144394379,144394234,144394113,144393883,144393667,144393452,144393231	144409349,144409172,144401673,144401563,144401291,144401075,144400817,144400493,144400276,144400085,144399868,144399710,144399503,144399373,144399202,144399038,144398868,144398638,144398443,144398132,144397879,144397661,144397413,144396929,144396741,144396500,144395551,144395355,144395182,144395023,144394796,144394555,144394300,144394160,144394038,144393796,144393590,144393365	Gene ID= ENSG00000071894.16 TPM= 61.3 Transcript Type= protein_coding
chr8	144412416	144416933	144412416	144416933	-	transcript4891.chr8.nic@SLC39A4	transcript4891.chr8.nic	protein_coding	144416598,144415810,144415227,144414974,144414725,144414262,144413958,144413750,144413513,144413237,144412416	144416933,144416091,144415419,144415110,144414896,144414434,144414095,144413881,144413567,144413389,144412946	Gene ID= ENSG00000147804.9 TPM= 6.22 Transcript Type= NA
chr8	144412414	144415533	144412414	144415533	-	transcript4892.chr8.nic@SLC39A4	transcript4892.chr8.nic	protein_coding	144415227,144414974,144414725,144414262,144413958,144413750,144413513,144413237,144412759,144412414	144415533,144415110,144414896,144414434,144414095,144413881,144413567,144413389,144412946,144412666	Gene ID= ENSG00000147804.9 TPM= 7.79 Transcript Type= NA
chr8	144412414	144413586	144412414	144413586	-	ENST00000532718.5@SLC39A4	ENST00000532718.5	protein_coding	144413513,144413237,144412759,144412414	144413586,144413389,144412946,144412666	Gene ID= ENSG00000147804.9 TPM= 17.32 Transcript Type= processed_transcript
chr8	144412415	144413591	144412415	144413591	-	ENST00000531013.1@SLC39A4	ENST00000531013.1	protein_coding	144413237,144412759,144412415	144413591,144412946,144412666	Gene ID= ENSG00000147804.9 TPM= 4.09 Transcript Type= processed_transcript
chr8	144412414	144416895	144412414	144416895	-	ENST00000301305.7@SLC39A4	ENST00000301305.7	protein_coding	144416598,144415810,144415227,144414974,144414725,144414262,144413958,144413750,144413513,144413237,144412759,144412414	144416895,144416091,144415419,144415110,144414896,144414434,144414095,144413881,144413567,144413389,144412946,144412666	Gene ID= ENSG00000147804.9 TPM= 32.31 Transcript Type= protein_coding
chr8	144423601	144428563	144423601	144428563	-	ENST00000292510.5@VPS28	ENST00000292510.5	protein_coding	144428489,144426909,144426180,144426026,144425683,144424946,144424718,144424215,144424041,144423601	144428563,144426979,144426208,144426063,144425772,144425051,144424819,144424268,144424132,144423922	Gene ID= ENSG00000160948.13 TPM= 95.16 Transcript Type= protein_coding
chr8	144423617	144428536	144423617	144428536	-	transcript4908.chr8.nic@VPS28	transcript4908.chr8.nic	protein_coding	144428489,144426909,144426180,144426026,144425683,144424946,144424718,144424215,144424041,144423617	144428536,144427291,144426208,144426063,144425772,144425051,144424819,144424268,144424132,144423922	Gene ID= ENSG00000160948.13 TPM= 11.68 Transcript Type= NA
chr8	144423617	144428555	144423617	144428555	-	transcript4912.chr8.nic@VPS28	transcript4912.chr8.nic	protein_coding	144428489,144426909,144426180,144426026,144424946,144424718,144424215,144424041,144423617	144428555,144426979,144426208,144426063,144425772,144424819,144424268,144424132,144423922	Gene ID= ENSG00000160948.13 TPM= 5.84 Transcript Type= NA
chr8	144423601	144428563	144423601	144428563	-	ENST00000377348.6@VPS28	ENST00000377348.6	protein_coding	144428489,144426909,144426180,144426026,144425683,144424946,144424718,144424215,144423601	144428563,144426979,144426208,144426063,144425772,144425051,144424819,144424268,144424132	Gene ID= ENSG00000160948.13 TPM= 9.92 Transcript Type= protein_coding
chr8	144423617	144428555	144423617	144428555	-	transcript4920.chr8.nic@VPS28	transcript4920.chr8.nic	protein_coding	144428489,144426909,144426180,144426026,144424718,144424215,144424041,144423617	144428555,144426979,144426208,144426063,144425772,144424268,144424132,144423922	Gene ID= ENSG00000160948.13 TPM= 5.84 Transcript Type= NA
chr8	144423617	144428555	144423617	144428555	-	transcript4933.chr8.nic@VPS28	transcript4933.chr8.nic	protein_coding	144428489,144426909,144426180,144426026,144424215,144423617	144428555,144426979,144426208,144426063,144425772,144424132	Gene ID= ENSG00000160948.13 TPM= 4.09 Transcript Type= NA
chr8	144423617	144428555	144423617	144428555	-	transcript4945.chr8.nic@VPS28	transcript4945.chr8.nic	protein_coding	144428489,144424215,144423617	144428555,144426979,144424132	Gene ID= ENSG00000160948.13 TPM= 4.09 Transcript Type= NA
chr8	144423617	144428555	144423617	144428555	-	transcript4946.chr8.nic@VPS28	transcript4946.chr8.nic	protein_coding	144428489,144426909,144423617	144428555,144426979,144426208	Gene ID= ENSG00000160948.13 TPM= 4.09 Transcript Type= NA
chr8	144423617	144426983	144423617	144426983	-	ENST00000526054.5@VPS28	ENST00000526054.5	protein_coding	144426909,144426180,144426026,144425683,144424946,144424718,144424215,144424041,144423617	144426983,144426208,144426063,144425772,144425051,144424819,144424268,144424132,144423922	Gene ID= ENSG00000160948.13 TPM= 10.51 Transcript Type= protein_coding
chr8	144428808	144444444	144428808	144444444	-	ENST00000409379.7@TONSL	ENST00000409379.7	protein_coding	144444390,144444180,144443882,144443138,144442677,144442241,144442037,144440966,144440718,144440351,144440021,144438653,144438471,144437027,144436757,144436558,144435658,144435474,144435017,144434811,144433978,144433588,144432285,144431078,144430404,144428808	144444444,144444275,144444024,144443321,144442806,144442412,144442151,144441111,144440870,144440476,144440210,144438735,144438560,144437099,144436920,144436681,144436418,144435550,144435170,144434889,144434279,144433759,144432460,144431151,144430537,144429336	Gene ID= ENSG00000160949.16 TPM= 1.17 Transcript Type= protein_coding
chr8	144428775	144442856	144428775	144442856	-	ENST00000497613.2@TONSL	ENST00000497613.2	protein_coding	144440718,144440351,144440021,144438653,144438471,144437027,144436757,144436558,144435658,144435474,144435017,144434811,144433978,144432285,144431078,144430404,144428775	144442856,144440476,144440210,144438735,144438560,144437099,144436920,144436681,144436418,144435550,144435170,144434889,144434279,144433759,144431151,144430537,144429336	Gene ID= ENSG00000160949.16 TPM= 1.17 Transcript Type= retained_intron
chr8	144447343	144450051	144447343	144450051	-	transcript4988.chr8.nnic@NA	transcript4988.chr8.nnic	NA	144447343	144450051	Gene ID= novel_gene_chr8_4989 TPM= 2.34 Transcript Type= NA
chr8	144449582	144457641	144449582	144457641	-	ENST00000528663.1@CYHR1	ENST00000528663.1	protein_coding	144453222,144452359,144449582	144457641,144452570,144450770	Gene ID= ENSG00000187954.12 TPM= 2.92 Transcript Type= retained_intron
chr8	144451120	144462875	144451120	144462875	-	transcript4974.chr8.nnic@CYHR1	transcript4974.chr8.nnic	protein_coding	144462283,144453222,144451120	144462875,144453411,144452570	Gene ID= ENSG00000187954.12 TPM= 10.51 Transcript Type= NA
chr8	144451120	144457928	144451120	144457928	-	ENST00000533173.1@CYHR1	ENST00000533173.1	protein_coding	144453222,144451120	144457928,144452570	Gene ID= ENSG00000187954.12 TPM= 7.59 Transcript Type= retained_intron
chr8	144463817	144465489	144463817	144465489	-	ENST00000403000.6@CYHR1	ENST00000403000.6	protein_coding	144464809,144463817	144465489,144464612	Gene ID= ENSG00000187954.12 TPM= 8.37 Transcript Type= protein_coding
chr8	144449931	144462861	144449931	144462861	-	ENST00000530374.5@CYHR1	ENST00000530374.5	protein_coding	144462283,144453222,144452359,144449931	144462861,144453460,144452570,144450770	Gene ID= ENSG00000187954.12 TPM= 28.02 Transcript Type= protein_coding
chr8	144463817	144465677	144463817	144465677	-	ENST00000306145.9@CYHR1	ENST00000306145.9	protein_coding	144465353,144464809,144463817	144465677,144465096,144464612	Gene ID= ENSG00000187954.12 TPM= 18.88 Transcript Type= protein_coding
chr8	144463817	144465648	144463817	144465648	-	ENST00000424149.6@CYHR1	ENST00000424149.6	protein_coding	144465571,144464809,144463817	144465648,144465096,144464612	Gene ID= ENSG00000187954.12 TPM= 6.04 Transcript Type= protein_coding
chr8	144463825	144465474	144463825	144465474	-	transcript4986.chr8.nnic@NA	transcript4986.chr8.nnic	NA	144463825	144465474	Gene ID= novel_gene_chr8_4987 TPM= 6.42 Transcript Type= NA
chr8	144466161	144474116	144466161	144474116	+	transcript4952.chr8.nnic@KIFC2	transcript4952.chr8.nnic	protein_coding	144466161,144466760,144466959,144467203,144467485,144467714,144467859,144468329,144468536,144468725,144469271,144469490,144471942,144472138,144472361,144472577,144472795,144473132	144466518,144466838,144467110,144467341,144467630,144467779,144467987,144468406,144468650,144468834,144469379,144469647,144472046,144472259,144472484,144472706,144473051,144474116	Gene ID= ENSG00000167702.11 TPM= 10.51 Transcript Type= NA
chr8	144466043	144474202	144466043	144474202	+	ENST00000301332.2@KIFC2	ENST00000301332.2	protein_coding	144466043,144466760,144466959,144467203,144467485,144467714,144467859,144468329,144468536,144468725,144469271,144469490,144471942,144472138,144472361,144472577,144472795	144466518,144466838,144467110,144467341,144467630,144467779,144467987,144468406,144468650,144468834,144469379,144469647,144472046,144472259,144472484,144472706,144474202	Gene ID= ENSG00000167702.11 TPM= 9.34 Transcript Type= protein_coding
chr8	144466350	144474116	144466350	144474116	+	transcript4961.chr8.nic@KIFC2	transcript4961.chr8.nic	protein_coding	144466350,144466760,144466959,144467203,144467485,144467714,144467859,144468329,144468536,144468725,144469271,144469490,144471942,144472138,144472361,144472577	144466518,144466838,144467110,144467341,144467630,144467779,144467987,144468406,144468650,144468834,144469379,144469647,144472046,144472259,144472484,144474116	Gene ID= ENSG00000167702.11 TPM= 5.84 Transcript Type= NA
chr8	144478020	144502121	144478020	144502121	+	transcript4992.chr8.nnic@PPP1R16A	transcript4992.chr8.nnic	protein_coding	144478020,144489091,144490034,144496461,144498770,144498916,144500096,144500267,144500487,144500686,144500842,144501129,144501520	144478127,144489164,144490212,144497453,144498840,144499061,144500199,144500391,144500612,144500761,144500971,144501294,144502121	Gene ID= ENSG00000160972.9 TPM= 7.79 Transcript Type= NA
chr8	144477961	144502121	144477961	144502121	+	transcript4996.chr8.nic@PPP1R16A	transcript4996.chr8.nic	protein_coding	144477961,144490034,144496461,144498770,144498916,144500096,144500267,144500487,144500686,144500842,144501129,144501520	144478127,144490212,144497453,144498840,144499061,144500199,144500391,144500612,144500761,144500971,144501294,144502121	Gene ID= ENSG00000160972.9 TPM= 54.49 Transcript Type= NA
chr8	144478042	144502121	144478042	144502121	+	transcript5002.chr8.nic@PPP1R16A	transcript5002.chr8.nic	protein_coding	144478042,144490034,144496461,144498770,144498916,144500096,144500267,144500842,144501129,144501520	144478127,144490212,144497453,144498840,144499061,144500199,144500761,144500971,144501294,144502121	Gene ID= ENSG00000160972.9 TPM= 4.29 Transcript Type= NA
chr8	144501089	144502120	144501089	144502120	+	ENST00000528430.2@PPP1R16A	ENST00000528430.2	protein_coding	144501089,144501520	144501294,144502120	Gene ID= ENSG00000160972.9 TPM= 12.84 Transcript Type= retained_intron
chr8	144508257	144511209	144508257	144511209	+	transcript5016.chr8.nic@MFSD3	transcript5016.chr8.nic	protein_coding	144508257,144510360,144510598,144510794	144510015,144510507,144510722,144511209	Gene ID= ENSG00000167700.8 TPM= 5.84 Transcript Type= NA
chr8	144508925	144511213	144508925	144511213	+	transcript5017.chr8.nic@MFSD3	transcript5017.chr8.nic	protein_coding	144508925,144510598,144510794,144510991	144510507,144510722,144510903,144511213	Gene ID= ENSG00000167700.8 TPM= 2.34 Transcript Type= NA
chr8	144509035	144511213	144509035	144511213	+	transcript5019.chr8.nic@MFSD3	transcript5019.chr8.nic	protein_coding	144509035,144510598,144510794,144510991	144510015,144510722,144510903,144511213	Gene ID= ENSG00000167700.8 TPM= 4.67 Transcript Type= NA
chr8	144509035	144511209	144509035	144511209	+	transcript5022.chr8.nic@MFSD3	transcript5022.chr8.nic	protein_coding	144509035,144510598,144510794	144510015,144510722,144511209	Gene ID= ENSG00000167700.8 TPM= 4.67 Transcript Type= NA
chr8	144509074	144511213	144509074	144511213	+	ENST00000301327.4@MFSD3	ENST00000301327.4	protein_coding	144509074,144510360,144510598,144510794,144510991	144510015,144510507,144510722,144510903,144511213	Gene ID= ENSG00000167700.8 TPM= 42.03 Transcript Type= protein_coding
chr8	144511288	144517845	144511288	144517845	-	ENST00000621189.4@RECQL4	ENST00000621189.4	protein_coding	144517602,144517414,144517050,144515988,144515764,144515326,144515150,144514936,144514442,144514189,144513928,144513571,144513218,144512847,144512642,144512392,144512144,144511911,144511681,144511288	144517845,144517508,144517190,144516764,144515890,144515457,144515242,144515072,144514525,144514362,144514107,144513712,144513480,144513138,144512771,144512561,144512324,144512067,144511789,144511555	Gene ID= ENSG00000160957.12 TPM= 4.67 Transcript Type= protein_coding
chr8	144517965	144525178	144517965	144525178	+	transcript5035.chr8.nic@LRRC14	transcript5035.chr8.nic	protein_coding	144517965,144519701,144520238,144520911,144523636,144523924,144524261	144518041,144520054,144520822,144523333,144523809,144524105,144525178	Gene ID= ENSG00000160959.7 TPM= 4.67 Transcript Type= NA
chr8	144517965	144525178	144517965	144525178	+	transcript5058.chr8.nic@LRRC14	transcript5058.chr8.nic	protein_coding	144517965,144519701,144520238,144520911	144518041,144520054,144520822,144525178	Gene ID= ENSG00000160959.7 TPM= 4.67 Transcript Type= NA
chr8	144517968	144522024	144517968	144522024	+	transcript5060.chr8.nnic@LRRC14	transcript5060.chr8.nnic	protein_coding	144517968,144519834,144520238,144520911	144518041,144520054,144520822,144522024	Gene ID= ENSG00000160959.7 TPM= 3.5 Transcript Type= NA
chr8	144517967	144522024	144517967	144522024	+	transcript5069.chr8.nic@LRRC14	transcript5069.chr8.nic	protein_coding	144517967,144520238,144520911	144520054,144520822,144522024	Gene ID= ENSG00000160959.7 TPM= 5.84 Transcript Type= NA
chr8	144518007	144525178	144518007	144525178	+	ENST00000292524.5@LRRC14	ENST00000292524.5	protein_coding	144518007,144519615,144520238,144520911	144518041,144520054,144520822,144525178	Gene ID= ENSG00000160959.7 TPM= 31.53 Transcript Type= protein_coding
chr8	144518005	144522024	144518005	144522024	+	ENST00000529022.5@LRRC14	ENST00000529022.5	protein_coding	144518005,144518749,144519615,144520238,144520911	144518041,144518815,144520054,144520822,144522024	Gene ID= ENSG00000160959.7 TPM= 5.84 Transcript Type= protein_coding
chr8	144522377	144529083	144522377	144529083	-	transcript5030.chr8.nnic@LRRC24	transcript5030.chr8.nnic	protein_coding	144528761,144528024,144526960,144526552,144524816,144524441,144524110,144522377	144529083,144528072,144527787,144526639,144525033,144524719,144524278,144523409	Gene ID= ENSG00000254402.6 TPM= 4.38 Transcript Type= NA
chr8	144522377	144529134	144522377	144529134	-	transcript5041.chr8.nic@LRRC24	transcript5041.chr8.nic	protein_coding	144528761,144528024,144526960,144524816,144524441,144524110,144522377	144529134,144528072,144527787,144525033,144524719,144524278,144523409	Gene ID= ENSG00000254402.6 TPM= 13.72 Transcript Type= NA
chr8	144522377	144529134	144522377	144529134	-	transcript5046.chr8.nnic@LRRC24	transcript5046.chr8.nnic	protein_coding	144528761,144528024,144524816,144524441,144524110,144522377	144529134,144528072,144525033,144524719,144524278,144523409	Gene ID= ENSG00000254402.6 TPM= 4.38 Transcript Type= NA
chr8	144522377	144529134	144522377	144529134	-	transcript5047.chr8.nic@LRRC24	transcript5047.chr8.nic	protein_coding	144528761,144528024,144524816,144524441,144524110,144522377	144529134,144528072,144527787,144524719,144524278,144523409	Gene ID= ENSG00000254402.6 TPM= 9.05 Transcript Type= NA
chr8	144526252	144529132	144526252	144529132	-	ENST00000534680.5@C8orf82	ENST00000534680.5	protein_coding	144528761,144528024,144526960,144526252	144529132,144528072,144527787,144526639	Gene ID= ENSG00000213563.6 TPM= 33.86 Transcript Type= nonsense_mediated_decay
chr8	144525733	144529132	144525733	144529132	-	ENST00000524821.5@C8orf82	ENST00000524821.5	protein_coding	144528761,144528024,144525733	144529132,144528072,144527787	Gene ID= ENSG00000213563.6 TPM= 78.23 Transcript Type= protein_coding
chr8	144529179	144605699	144529179	144605699	-	ENST00000377307.6@ARHGAP39	ENST00000377307.6	protein_coding	144605535,144580846,144555560,144547127,144545249,144537721,144534129,144533126,144532305,144530702,144529179	144605699,144581277,144555643,144548489,144545810,144537813,144534202,144533325,144532396,144530871,144530616	Gene ID= ENSG00000147799.11 TPM= 1.17 Transcript Type= protein_coding
chr8	144713245	144714845	144713245	144714845	+	transcript5075.chr8.nnic@NA	transcript5075.chr8.nnic	NA	144713245	144714845	Gene ID= novel_gene_chr8_5076 TPM= 2.34 Transcript Type= NA
chr8	144720911	144755483	144720911	144755483	-	transcript5079.chr8.nnic@ZNF251	transcript5079.chr8.nnic	protein_coding	144755136,144754696,144754192,144753683,144720911	144755483,144754803,144754321,144753796,144723382	Gene ID= ENSG00000198169.8 TPM= 4.29 Transcript Type= NA
chr8	144720911	144755588	144720911	144755588	-	transcript5082.chr8.nic@ZNF251	transcript5082.chr8.nic	protein_coding	144754696,144754192,144753683,144720911	144755588,144754321,144753796,144723382	Gene ID= ENSG00000198169.8 TPM= 8.96 Transcript Type= NA
chr8	144720911	144755554	144720911	144755554	-	transcript5085.chr8.nic@ZNF251	transcript5085.chr8.nic	protein_coding	144754192,144753683,144720911	144755554,144753796,144723382	Gene ID= ENSG00000198169.8 TPM= 10.12 Transcript Type= NA
chr8	144737995	144755463	144737995	144755463	-	transcript5087.chr8.nnic@ZNF251	transcript5087.chr8.nnic	protein_coding	144754192,144753683,144737995	144755463,144753796,144738706	Gene ID= ENSG00000198169.8 TPM= 2.34 Transcript Type= NA
chr8	144753454	144755441	144753454	144755441	-	ENST00000525191.2@ZNF251	ENST00000525191.2	protein_coding	144755405,144754696,144754192,144753454	144755441,144754803,144754321,144753796	Gene ID= ENSG00000198169.8 TPM= 1.17 Transcript Type= protein_coding
chr8	144773114	144787325	144773114	144787325	-	ENST00000429371.6@ZNF34	ENST00000429371.6	protein_coding	144787279,144780228,144778439,144778038,144777458,144773114	144787325,144780280,144778525,144778164,144777577,144774605	Gene ID= ENSG00000196378.11 TPM= 10.51 Transcript Type= protein_coding
chr8	144789769	144792389	144789769	144792389	-	ENST00000394920.6@RPL8	ENST00000394920.6	protein_coding	144792245,144791992,144791773,144791277,144790355,144789769	144792389,144792140,144791914,144791495,144790470,144789962	Gene ID= ENSG00000161016.17 TPM= 809.14 Transcript Type= protein_coding
chr8	144789785	144792351	144789785	144792351	-	ENST00000528957.5@RPL8	ENST00000528957.5	protein_coding	144791992,144791773,144791277,144790355,144789785	144792351,144791914,144791495,144790470,144789962	Gene ID= ENSG00000161016.17 TPM= 19.85 Transcript Type= protein_coding
chr8	144827561	144843220	144827561	144843220	+	transcript5136.chr8.nnic@ZNF7	transcript5136.chr8.nnic	protein_coding	144827561,144837391,144841355	144827609,144837507,144843220	Gene ID= ENSG00000147789.15 TPM= 3.5 Transcript Type= NA
chr8	144827559	144843220	144827559	144843220	+	ENST00000446747.6@ZNF7	ENST00000446747.6	protein_coding	144827559,144829043,144829445,144837391,144841355	144827609,144829090,144829604,144837507,144843220	Gene ID= ENSG00000147789.15 TPM= 5.84 Transcript Type= protein_coding
chr8	144827559	144847509	144827559	144847509	+	ENST00000525266.5@ZNF7	ENST00000525266.5	protein_coding	144827559,144829043,144829478,144837391,144845979	144827609,144829090,144829604,144837507,144847509	Gene ID= ENSG00000147789.15 TPM= 1.17 Transcript Type= protein_coding
chr8	144850166	144853067	144850166	144853067	-	ENST00000402718.4@COMMD5	ENST00000402718.4	protein_coding	144852993,144850166	144853067,144851395	Gene ID= ENSG00000170619.9 TPM= 7.01 Transcript Type= protein_coding
chr8	144850219	144853034	144850219	144853034	-	ENST00000305103.3@COMMD5	ENST00000305103.3	protein_coding	144852839,144850219	144853034,144851395	Gene ID= ENSG00000170619.9 TPM= 5.84 Transcript Type= protein_coding
chr8	144881144	144901475	144881144	144901475	-	transcript5129.chr8.nic@ZNF250	transcript5129.chr8.nic	protein_coding	144901399,144890308,144889933,144889581,144881144	144901475,144890403,144890074,144889694,144882836	Gene ID= ENSG00000196150.13 TPM= 2.34 Transcript Type= NA
chr8	144881139	144901431	144881139	144901431	-	ENST00000417550.6@ZNF250	ENST00000417550.6	protein_coding	144901399,144890308,144889933,144889581,144886840,144881139	144901431,144890403,144890059,144889694,144886902,144882836	Gene ID= ENSG00000196150.13 TPM= 8.17 Transcript Type= protein_coding
chr8	144944089	144950875	144944089	144950875	-	ENST00000527427.1@ZNF16	ENST00000527427.1	protein_coding	144950797,144944089	144950875,144946215	Gene ID= ENSG00000170631.14 TPM= 1.17 Transcript Type= retained_intron
chr8	145052378	145056030	145052378	145056030	+	ENST00000331434.6@C8orf33	ENST00000331434.6	protein_coding	145052378,145052586,145053062,145053297,145054018	145052497,145052897,145053146,145053443,145056030	Gene ID= ENSG00000182307.12 TPM= 19.85 Transcript Type= protein_coding
chr8	145052467	145056030	145052467	145056030	+	ENST00000530455.5@C8orf33	ENST00000530455.5	protein_coding	145052467,145053062,145053297,145054018	145052897,145053146,145053443,145056030	Gene ID= ENSG00000182307.12 TPM= 14.01 Transcript Type= retained_intron
chr9	14521	25007	14521	25007	-	transcript3.chr9.nnic@WASHC1	transcript3.chr9.nnic	protein_coding	24851,18381,18028,17719,17344,16965,16718,15909,15081,14521	25007,18479,18174,17855,17479,17166,16876,16061,15149,14940	Gene ID= ENSG00000181404.15 TPM= 42.62 Transcript Type= NA
chr9	14521	25007	14521	25007	-	transcript9.chr9.nnic@WASHC1	transcript9.chr9.nnic	protein_coding	24851,18381,18028,17344,16965,15909,15081,14521	25007,18479,18174,17855,17166,16876,15149,14940	Gene ID= ENSG00000181404.15 TPM= 5.25 Transcript Type= NA
chr9	44072	73867	44072	73867	-	transcript16.chr9.nnic@NA	transcript16.chr9.nnic	NA	73683,52452,44072	73867,52614,46137	Gene ID= novel_gene_chr9_17 TPM= 2.34 Transcript Type= NA
chr9	72678	75296	72678	75296	+	transcript20.chr9.nnic@NA	transcript20.chr9.nnic	NA	72678	75296	Gene ID= novel_gene_chr9_21 TPM= 3.5 Transcript Type= NA
chr9	116231	118204	116231	118204	-	ENST00000382500.3@FOXD4	ENST00000382500.3	protein_coding	116231	118204	Gene ID= ENSG00000170122.5 TPM= 1.17 Transcript Type= protein_coding
chr9	121060	179047	121060	179047	-	ENST00000314367.14@CBWD1	ENST00000314367.14	protein_coding	178816,177723,175698,173270,172081,163978,162432,156481,154709,152034,146102,134979,123386,123217,121961,121060	179047,177820,175784,173366,172172,164037,162469,156527,154795,152078,146158,135030,123454,123282,122090,121573	Gene ID= ENSG00000172785.18 TPM= 10.51 Transcript Type= protein_coding
chr9	121409	179021	121409	179021	-	ENST00000382447.8@CBWD1	ENST00000382447.8	protein_coding	178816,175698,173270,172081,163978,162432,156481,154709,152034,134979,123386,123217,121961,121409	179021,175784,173366,172172,164037,162469,156527,154795,152078,135030,123454,123282,122090,121573	Gene ID= ENSG00000172785.18 TPM= 4.67 Transcript Type= protein_coding
chr9	213112	215403	213112	215403	-	transcript41.chr9.nnic@NA	transcript41.chr9.nnic	NA	213112	215403	Gene ID= novel_gene_chr9_42 TPM= 2.34 Transcript Type= NA
chr9	214855	313973	214855	313973	+	transcript38.chr9.nic@DOCK8	transcript38.chr9.nic	protein_coding	214855,271627,286461,289510,304581,311954	215029,271729,286636,289581,304704,313973	Gene ID= ENSG00000107099.15 TPM= 2.34 Transcript Type= NA
chr9	214865	465259	214865	465259	+	ENST00000432829.6@DOCK8	ENST00000432829.6	protein_coding	214865,271627,286461,289510,304581,311954,317043,325671,328022,332398,334225,336582,339006,340159,368018,370230,371428,372185,376210,376977,379771,382513,386331,390471,396785,399146,404918,406930,414782,418068,420401,420949,422048,426885,428362,429702,432166,433875,434783,439245,441286,441875,443427,446370,449784,452011,463517,464159	215029,271729,286636,289581,304704,312166,317128,325737,328171,332478,334384,336718,339099,340321,368135,370300,371566,372286,376305,377211,379935,382685,386426,390566,396934,399259,405073,407069,414951,418207,420583,421078,422135,426981,428496,429854,432324,433975,434975,439388,441417,442009,443516,446606,449927,452117,463687,465259	Gene ID= ENSG00000107099.15 TPM= 45.54 Transcript Type= protein_coding
chr9	504054	746102	504054	746102	+	transcript46.chr9.nnic@KANK1	transcript46.chr9.nnic	protein_coding	504054,676890,710804,730051,731158,732378,734748,738285,740792,742205,744491,745173	504243,677009,713464,730248,731266,732617,734835,738504,740934,742405,744589,746102	Gene ID= ENSG00000107104.18 TPM= 4.03 Transcript Type= NA
chr9	693680	746102	693680	746102	+	transcript53.chr9.nnic@KANK1	transcript53.chr9.nnic	protein_coding	693680,710804,730051,731158,732378,734748,738285,740792,742205,744491,745173	693786,713464,730248,731266,732617,734835,738504,740934,742405,744589,746102	Gene ID= ENSG00000107104.18 TPM= 4.61 Transcript Type= NA
chr9	707041	746102	707041	746102	+	transcript60.chr9.nnic@KANK1	transcript60.chr9.nnic	protein_coding	707041,710804,730051,731158,734748,738285,740792,742205,744491,745173	707247,713464,730248,731266,734835,738504,740934,742405,744589,746102	Gene ID= ENSG00000107104.18 TPM= 6.07 Transcript Type= NA
chr9	504489	596998	504489	596998	+	transcript68.chr9.nnic@KANK1	transcript68.chr9.nnic	protein_coding	504489,539516,540508,593609	504754,539633,540667,596998	Gene ID= ENSG00000107104.18 TPM= 3.5 Transcript Type= NA
chr9	504716	746105	504716	746105	+	ENST00000382297.6@KANK1	ENST00000382297.6	protein_coding	504716,676890,710804,730051,731158,732378,734748,738285,740792,742205,744491,745173	504754,677009,713464,730248,731266,732617,734835,738504,740934,742405,744589,746105	Gene ID= ENSG00000107104.18 TPM= 18.62 Transcript Type= protein_coding
chr9	706889	746103	706889	746103	+	ENST00000382293.7@KANK1	ENST00000382293.7	protein_coding	706889,710804,730051,731158,732378,734748,738285,740792,742205,744491,745173	707247,713464,730248,731266,732617,734835,738504,740934,742405,744589,746103	Gene ID= ENSG00000107104.18 TPM= 11.03 Transcript Type= protein_coding
chr9	2016081	2193574	2016081	2193574	+	transcript70.chr9.nic@SMARCA2	transcript70.chr9.nic	protein_coding	2016081,2028987,2032952,2039466,2047229,2054597,2056672,2058291,2060816,2070418,2072032,2073212,2073566,2076229,2077629,2081832,2083347,2084086,2086829,2088500,2096657,2097385,2101570,2104003,2110254,2115822,2119458,2123719,2161686,2170419,2181571,2182141,2186096,2191266,2192704	2016143,2029247,2033081,2039900,2047484,2054723,2056845,2058464,2060986,2070471,2072067,2073342,2073623,2076329,2077776,2081995,2083413,2084196,2087071,2088613,2096764,2097471,2101616,2104169,2110417,2116049,2119535,2123937,2161903,2170472,2181676,2182242,2186228,2191408,2193574	Gene ID= ENSG00000080503.22 TPM= 4.09 Transcript Type= NA
chr9	2015186	2193620	2015186	2193620	+	ENST00000357248.8@SMARCA2	ENST00000357248.8	protein_coding	2015186,2028987,2032952,2039466,2047229,2054597,2056672,2058291,2060816,2070418,2073212,2073566,2076229,2077629,2081832,2083347,2084086,2086829,2088500,2096657,2097385,2101570,2104003,2110254,2115822,2119458,2123719,2161686,2181571,2182141,2186096,2191266,2192704	2015404,2029247,2033081,2039900,2047484,2054723,2056845,2058464,2060986,2070471,2073342,2073623,2076329,2077776,2081995,2083413,2084196,2087071,2088613,2096764,2097471,2101616,2104169,2110417,2116049,2119535,2123937,2161903,2181676,2182242,2186228,2191408,2193620	Gene ID= ENSG00000080503.22 TPM= 43.78 Transcript Type= protein_coding
chr9	2015964	2193574	2015964	2193574	+	transcript74.chr9.nic@SMARCA2	transcript74.chr9.nic	protein_coding	2015964,2028987,2032952,2039466,2047229,2054597,2056672,2058291,2060816,2070418,2073212,2073566,2076229,2077629,2081832,2083347,2084086,2086829,2088500,2096657,2097385,2101570,2104003,2110254,2115822,2119458,2123719,2161686,2181571,2182141,2186096,2191266,2192704	2016143,2029247,2033081,2039900,2047484,2054723,2056845,2058464,2060986,2070471,2073342,2073623,2076329,2077776,2081995,2083413,2084196,2087071,2088613,2096764,2097471,2101616,2104169,2110417,2116049,2119535,2123937,2161903,2181676,2182242,2186228,2191408,2193574	Gene ID= ENSG00000080503.22 TPM= 26.85 Transcript Type= NA
chr9	2017322	2193574	2017322	2193574	+	transcript76.chr9.nic@SMARCA2	transcript76.chr9.nic	protein_coding	2017322,2028987,2032952,2039466,2047229,2054597,2056672,2058291,2060816,2070418,2073212,2073566,2076229,2077629,2081832,2083347,2084086,2086829,2088500,2096657,2097385,2101570,2104003,2110254,2115822,2119458,2123719,2161686,2181571,2182141,2186096,2191266,2192704	2017799,2029247,2033081,2039900,2047484,2054723,2056845,2058464,2060986,2070471,2073342,2073623,2076329,2077776,2081995,2083413,2084196,2087071,2088613,2096764,2097471,2101616,2104169,2110417,2116049,2119535,2123937,2161903,2181676,2182242,2186228,2191408,2193574	Gene ID= ENSG00000080503.22 TPM= 31.53 Transcript Type= NA
chr9	2015281	2046037	2015281	2046037	+	ENST00000637103.1@SMARCA2	ENST00000637103.1	protein_coding	2015281,2028987,2032952,2039466,2041331	2015404,2029247,2033081,2039900,2046037	Gene ID= ENSG00000080503.22 TPM= 2.34 Transcript Type= protein_coding
chr9	2622100	2654480	2622100	2654480	+	ENST00000382099.2@VLDLR	ENST00000382099.2	protein_coding	2622100,2635453,2639859,2641377,2643160,2643628,2643837,2644734,2644957,2645574,2646334,2647474,2648208,2648669,2650370,2651874,2652780,2653833	2622271,2635572,2639981,2641499,2643531,2643750,2643959,2644853,2645082,2645745,2646552,2647592,2648347,2648810,2650516,2651954,2652949,2654480	Gene ID= ENSG00000147852.15 TPM= 3.5 Transcript Type= protein_coding
chr9	2804164	2844241	2804164	2844241	-	ENST00000397885.2@PUM3	ENST00000397885.2	protein_coding	2844045,2838426,2837180,2834031,2833357,2831251,2830962,2829774,2828675,2827073,2824717,2823781,2820018,2812220,2811361,2810344,2807814,2804164	2844241,2838517,2837401,2834166,2833432,2831344,2831028,2829948,2828778,2827151,2824815,2823834,2820098,2812362,2811583,2810431,2807904,2804463	Gene ID= ENSG00000080608.9 TPM= 43.2 Transcript Type= protein_coding
chr9	2804164	2844127	2804164	2844127	-	transcript94.chr9.nic@PUM3	transcript94.chr9.nic	protein_coding	2844045,2838426,2837180,2834031,2833357,2831251,2830962,2829774,2827073,2824717,2823781,2820018,2812220,2811361,2810344,2807814,2804164	2844127,2838517,2837401,2834166,2833432,2831344,2831028,2829948,2828778,2824815,2823834,2820098,2812362,2811583,2810431,2807904,2804463	Gene ID= ENSG00000080608.9 TPM= 3.5 Transcript Type= NA
chr9	4490423	4587258	4490423	4587258	+	transcript100.chr9.nnic@SLC1A1	transcript100.chr9.nnic	protein_coding	4490423,4544567,4561449,4564344,4566047,4567669,4572204,4573907,4576001,4576569,4583038,4584576	4490770,4544707,4561541,4564458,4566089,4567767,4572388,4574014,4576123,4576763,4583172,4587258	Gene ID= ENSG00000106688.11 TPM= 4.67 Transcript Type= NA
chr9	4490444	4587469	4490444	4587469	+	ENST00000262352.7@SLC1A1	ENST00000262352.7	protein_coding	4490444,4544567,4561449,4564344,4566047,4567669,4572204,4573907,4576001,4576569,4583038,4585312	4490770,4544707,4561541,4564458,4566089,4567767,4572388,4574014,4576123,4576763,4583172,4587469	Gene ID= ENSG00000106688.11 TPM= 47.87 Transcript Type= protein_coding
chr9	4662315	4665258	4662315	4665258	+	ENST00000381883.3@PLPP6	ENST00000381883.3	protein_coding	4662315	4665258	Gene ID= ENSG00000205808.5 TPM= 16.35 Transcript Type= protein_coding
chr9	4678819	4679502	4678819	4679502	-	ENST00000607997.1@CDC37L1-AS1	ENST00000607997.1	lincRNA	4679387,4678819	4679502,4679165	Gene ID= ENSG00000273061.1 TPM= 1.17 Transcript Type= lincRNA
chr9	4676600	4679471	4676600	4679471	-	ENST00000609131.1@CDC37L1-AS1	ENST00000609131.1	lincRNA	4679387,4676600	4679471,4676749	Gene ID= ENSG00000273061.1 TPM= 1.17 Transcript Type= lincRNA
chr9	4679566	4708398	4679566	4708398	+	ENST00000381854.3@CDC37L1	ENST00000381854.3	protein_coding	4679566,4684877,4688513,4697096,4697757,4701864,4706011	4679899,4685158,4688606,4697211,4697879,4702028,4708398	Gene ID= ENSG00000106993.11 TPM= 28.02 Transcript Type= protein_coding
chr9	4709559	4741191	4709559	4741191	-	transcript118.chr9.nnic@AK3	transcript118.chr9.nnic	protein_coding	4740937,4722506,4719135,4718419,4712968,4709559	4741191,4722625,4719307,4718537,4713096,4710904	Gene ID= ENSG00000147853.16 TPM= 2.34 Transcript Type= NA
chr9	4711155	4741318	4711155	4741318	-	ENST00000381809.7@AK3	ENST00000381809.7	protein_coding	4740937,4722506,4719135,4718419,4711155	4741318,4722625,4719307,4718537,4713096	Gene ID= ENSG00000147853.16 TPM= 21.02 Transcript Type= protein_coding
chr9	4732228	4735577	4732228	4735577	+	transcript126.chr9.nnic@NA	transcript126.chr9.nnic	NA	4732228	4735577	Gene ID= novel_gene_chr9_127 TPM= 2.34 Transcript Type= NA
chr9	4792869	4861064	4792869	4861064	+	ENST00000381750.8@RCL1	ENST00000381750.8	protein_coding	4792869,4823548,4826858,4833154,4834141,4841232,4844525,4849447,4860125	4793227,4823619,4827033,4833228,4834265,4841357,4844681,4849550,4861064	Gene ID= ENSG00000120158.11 TPM= 9.34 Transcript Type= protein_coding
chr9	4834473	4835764	4834473	4835764	-	transcript133.chr9.nnic@NA	transcript133.chr9.nnic	NA	4834473	4835764	Gene ID= novel_gene_chr9_134 TPM= 3.5 Transcript Type= NA
chr9	4984856	5129946	4984856	5129946	+	transcript153.chr9.nnic@JAK2	transcript153.chr9.nnic	protein_coding	4984856,4985940,5021963,5029783,5044403,5050686,5054563,5055669,5064883,5066678,5069022,5069925,5072492,5073698,5077453,5078306,5080229,5080533,5081725,5089674,5090446,5090739,5123004,5126333,5126684	4985572,4986022,5022213,5029906,5044520,5050831,5054884,5055788,5065040,5066789,5069208,5070052,5072626,5073785,5077580,5078444,5080380,5080683,5081861,5089863,5090570,5090911,5123121,5126446,5129946	Gene ID= ENSG00000096968.13 TPM= 3.5 Transcript Type= NA
chr9	4985245	5128183	4985245	5128183	+	ENST00000381652.3@JAK2	ENST00000381652.3	protein_coding	4985245,4985940,5021963,5029783,5044403,5050686,5054563,5055669,5064883,5066678,5069022,5069925,5072492,5073698,5077453,5078306,5080229,5080533,5081725,5089674,5090446,5090739,5123004,5126333,5126684	4985630,4986022,5022213,5029906,5044520,5050831,5054884,5055788,5065040,5066789,5069208,5070052,5072626,5073785,5077580,5078444,5080380,5080683,5081861,5089863,5090570,5090911,5123121,5126446,5128183	Gene ID= ENSG00000096968.13 TPM= 3.5 Transcript Type= protein_coding
chr9	5357973	5437925	5357973	5437925	-	transcript175.chr9.nnic@PLGRKT	transcript175.chr9.nnic	protein_coding	5437789,5436569,5361758,5361078,5357973	5437925,5436694,5361888,5361187,5358360	Gene ID= ENSG00000107020.9 TPM= 2.34 Transcript Type= NA
chr9	5357973	5437878	5357973	5437878	-	ENST00000223864.6@PLGRKT	ENST00000223864.6	protein_coding	5437789,5436569,5431897,5361758,5361078,5357973	5437878,5436694,5431983,5361888,5361187,5358360	Gene ID= ENSG00000107020.9 TPM= 16.35 Transcript Type= protein_coding
chr9	5450525	5470547	5450525	5470547	+	ENST00000381577.3@CD274	ENST00000381577.3	protein_coding	5450525,5456100,5457079,5462834,5465499,5466770,5467840	5450596,5456165,5457420,5463121,5465606,5466829,5470547	Gene ID= ENSG00000120217.13 TPM= 5.84 Transcript Type= protein_coding
chr9	5510570	5571254	5510570	5571254	+	ENST00000397747.4@PDCD1LG2	ENST00000397747.4	protein_coding	5510570,5522533,5534745,5549335,5557618,5563162,5569954	5510803,5522601,5535050,5549604,5557752,5563211,5571254	Gene ID= ENSG00000197646.7 TPM= 5.84 Transcript Type= protein_coding
chr9	5629025	5769674	5629025	5769674	+	ENST00000251879.10@RIC1	ENST00000251879.10	protein_coding	5629025,5656583,5689959,5713896,5720182,5720614,5732388,5738450,5742869,5743689,5745931,5747302,5753200,5753536,5754841,5756212,5757313,5762541,5763140,5765414,5765662,5768970	5629453,5656690,5690038,5714003,5720324,5720750,5732479,5738538,5743013,5743737,5746083,5747505,5753238,5753646,5754930,5756372,5757451,5762660,5763868,5765572,5765798,5769674	Gene ID= ENSG00000107036.11 TPM= 1.75 Transcript Type= protein_coding
chr9	5629119	5776557	5629119	5776557	+	ENST00000414202.6@RIC1	ENST00000414202.6	protein_coding	5629119,5656583,5689959,5713896,5720182,5720614,5732388,5738450,5742869,5743689,5745931,5747302,5753200,5753536,5754841,5756212,5757313,5762541,5763140,5765414,5765662,5768970,5770087,5772564,5772892,5773958	5629453,5656690,5690038,5714003,5720324,5720750,5732479,5738538,5743013,5743737,5746083,5747505,5753238,5753646,5754930,5756372,5757451,5762660,5763868,5765572,5765798,5769256,5770278,5772741,5773080,5776557	Gene ID= ENSG00000107036.11 TPM= 11.09 Transcript Type= protein_coding
chr9	5694798	5696507	5694798	5696507	-	transcript192.chr9.nnic@NA	transcript192.chr9.nnic	NA	5694798	5696507	Gene ID= novel_gene_chr9_193 TPM= 2.34 Transcript Type= NA
chr9	5784573	5833117	5784573	5833117	-	ENST00000339450.9@ERMP1	ENST00000339450.9	protein_coding	5832690,5830727,5825092,5823896,5812889,5812125,5811111,5810011,5805611,5805027,5801176,5798806,5797817,5787430,5784573	5833117,5831028,5825219,5824001,5813035,5812217,5811323,5810231,5805785,5805217,5801328,5799008,5797932,5787593,5787308	Gene ID= ENSG00000099219.13 TPM= 61.88 Transcript Type= protein_coding
chr9	5784571	5833120	5784571	5833120	-	transcript205.chr9.nnic@ERMP1	transcript205.chr9.nnic	protein_coding	5832690,5830727,5825092,5823896,5812889,5812125,5811111,5810011,5801176,5798806,5797817,5787430,5784571	5833120,5831028,5825219,5824001,5813035,5812217,5811323,5810231,5801328,5799008,5797932,5787593,5787308	Gene ID= ENSG00000099219.13 TPM= 4.67 Transcript Type= NA
chr9	5781562	5783118	5781562	5783118	+	transcript209.chr9.nnic@NA	transcript209.chr9.nnic	NA	5781562	5783118	Gene ID= novel_gene_chr9_210 TPM= 2.34 Transcript Type= NA
chr9	5968162	6008489	5968162	6008489	-	transcript213.chr9.nic@KIAA2026	transcript213.chr9.nic	protein_coding	6007195,5988345,5968162	6008489,5988545,5969436	Gene ID= ENSG00000183354.11 TPM= 21.02 Transcript Type= NA
chr9	6011043	6015618	6011043	6015618	-	ENST00000259569.5@RANBP6	ENST00000259569.5	protein_coding	6011043	6015618	Gene ID= ENSG00000137040.9 TPM= 24.52 Transcript Type= protein_coding
chr9	6215780	6257983	6215780	6257983	+	transcript217.chr9.nic@IL33	transcript217.chr9.nic	protein_coding	6215780,6241684,6250474,6251140,6252866,6253552,6254462,6255968	6215852,6241785,6250599,6251265,6252991,6253602,6254553,6257983	Gene ID= ENSG00000137033.11 TPM= 36.2 Transcript Type= NA
chr9	6215786	6257982	6215786	6257982	+	ENST00000417746.6@IL33	ENST00000417746.6	protein_coding	6215786,6241684,6253552,6254462,6255968	6215852,6241785,6253602,6254553,6257982	Gene ID= ENSG00000137033.11 TPM= 2.34 Transcript Type= protein_coding
chr9	6241682	6257983	6241682	6257983	+	ENST00000381434.7@IL33	ENST00000381434.7	protein_coding	6241682,6250474,6251140,6252866,6253552,6254462,6255968	6241785,6250599,6251265,6252991,6253602,6254553,6257983	Gene ID= ENSG00000137033.11 TPM= 3.5 Transcript Type= protein_coding
chr9	6413151	6507054	6413151	6507054	+	ENST00000468435.6@UHRF2	ENST00000468435.6	protein_coding	6413151,6420912,6433914,6460573,6475391,6477622,6481643,6481992,6486821,6492303,6493826,6497198,6498018,6499835,6500552,6504593,6506033	6413643,6421142,6434173,6460791,6475500,6477808,6481766,6482099,6486925,6492401,6493932,6497360,6498158,6499931,6500709,6504691,6507054	Gene ID= ENSG00000147854.16 TPM= 6.42 Transcript Type= nonsense_mediated_decay
chr9	6413323	6507054	6413323	6507054	+	ENST00000276893.9@UHRF2	ENST00000276893.9	protein_coding	6413323,6420912,6433914,6460573,6475391,6477622,6481643,6481992,6486821,6493826,6497198,6498018,6499835,6500552,6504593,6506033	6413643,6421142,6434173,6460791,6475500,6477808,6481766,6482099,6486925,6493932,6497360,6498158,6499931,6500709,6504691,6507054	Gene ID= ENSG00000147854.16 TPM= 20.43 Transcript Type= protein_coding
chr9	6757656	7175648	6757656	7175648	+	ENST00000381309.7@KDM4C	ENST00000381309.7	protein_coding	6757656,6792972,6805599,6814631,6849507,6880012,6887960,6893095,6980925,6984166,6986344,6990416,7011698,7013788,7015853,7046862,7049092,7103685,7128066,7165238,7169798,7174553	6758203,6793132,6805774,6814745,6849700,6880061,6888063,6893232,6981118,6984404,6986666,6990524,7011879,7014001,7015929,7046917,7049200,7103870,7128236,7165357,7169890,7175648	Gene ID= ENSG00000107077.18 TPM= 28.02 Transcript Type= protein_coding
chr9	6832726	6836052	6832726	6836052	-	transcript237.chr9.nnic@NA	transcript237.chr9.nnic	NA	6832726	6836052	Gene ID= novel_gene_chr9_238 TPM= 4.67 Transcript Type= NA
chr9	7796490	7800067	7796490	7800067	-	ENST00000358227.4@DMAC1	ENST00000358227.4	protein_coding	7799461,7796490	7800067,7798637	Gene ID= ENSG00000137038.7 TPM= 14.01 Transcript Type= protein_coding
chr9	8858130	8862255	8858130	8862255	+	ENST00000447950.1@PTPRD-AS1	ENST00000447950.1	lincRNA	8858130,8860782	8858323,8862255	Gene ID= ENSG00000225706.1 TPM= 2.34 Transcript Type= lincRNA
chr9	12693435	12710290	12693435	12710290	+	ENST00000388918.9@TYRP1	ENST00000388918.9	protein_coding	12693435,12693912,12695515,12698451,12702271,12704526,12707997,12708977	12693478,12694381,12695837,12698655,12702438,12704705,12708143,12710290	Gene ID= ENSG00000107165.12 TPM= 1.17 Transcript Type= protein_coding
chr9	12774988	12777577	12774988	12777577	+	transcript252.chr9.nnic@NA	transcript252.chr9.nnic	NA	12774988	12777577	Gene ID= novel_gene_chr9_253 TPM= 5.84 Transcript Type= NA
chr9	12775021	12822131	12775021	12822131	+	ENST00000319264.3@LURAP1L	ENST00000319264.3	protein_coding	12775021,12821386	12776027,12822131	Gene ID= ENSG00000153714.5 TPM= 37.36 Transcript Type= protein_coding
chr9	12779268	12781128	12779268	12781128	-	transcript254.chr9.nnic@NA	transcript254.chr9.nnic	NA	12779268	12781128	Gene ID= novel_gene_chr9_255 TPM= 22.18 Transcript Type= NA
chr9	13105706	13279761	13105706	13279761	-	transcript261.chr9.nic@MPDZ	transcript261.chr9.nic	protein_coding	13279400,13250300,13247635,13224374,13223571,13222233,13221372,13219559,13217180,13216774,13205916,13205036,13196121,13193167,13192131,13190114,13188784,13186270,13183418,13176136,13175752,13168366,13162691,13158018,13150511,13139987,13137957,13136712,13136092,13133824,13126680,13126516,13125216,13123153,13122087,13121739,13119502,13115248,13113931,13113011,13112024,13110636,13109952,13108936,13105706	13279761,13250372,13247801,13224583,13223710,13222446,13221500,13219768,13217294,13216862,13206099,13205107,13196230,13193313,13192295,13190299,13188993,13186386,13183585,13176417,13175875,13168564,13162795,13158110,13150688,13140149,13138153,13136803,13136182,13133904,13126772,13126590,13125390,13123298,13122170,13121932,13119649,13115334,13114021,13113054,13112146,13110740,13110064,13109059,13107111	Gene ID= ENSG00000107186.16 TPM= 7.01 Transcript Type= NA
chr9	13105704	13279590	13105704	13279590	-	ENST00000319217.11@MPDZ	ENST00000319217.11	protein_coding	13279400,13250300,13247635,13224374,13223571,13222233,13221372,13219559,13217180,13216774,13205916,13205036,13196121,13193167,13192131,13190114,13188784,13186270,13183418,13176136,13175752,13168366,13162691,13158018,13150511,13147548,13143466,13139987,13137957,13136712,13136092,13133824,13126680,13126516,13125216,13123153,13122087,13121739,13119502,13115248,13113931,13113011,13112024,13110636,13109952,13108936,13105704	13279590,13250372,13247801,13224583,13223710,13222446,13221500,13219768,13217294,13216862,13206099,13205107,13196230,13193313,13192295,13190299,13188993,13186386,13183585,13176417,13175875,13168564,13162795,13158110,13150688,13147658,13143564,13140149,13138153,13136803,13136182,13133904,13126772,13126590,13125390,13123298,13122170,13121932,13119649,13115334,13114021,13113054,13112146,13110740,13110064,13109059,13107111	Gene ID= ENSG00000107186.16 TPM= 4.67 Transcript Type= protein_coding
chr9	14087565	14314959	14087565	14314959	-	transcript287.chr9.nnic@NFIB	transcript287.chr9.nnic	protein_coding	14314772,14306989,14179727,14155825,14150145,14146689,14125632,14120440,14087565	14314959,14307520,14179780,14155893,14150265,14146807,14125766,14120624,14088326	Gene ID= ENSG00000147862.15 TPM= 5.84 Transcript Type= NA
chr9	14087603	14314582	14087603	14314582	-	ENST00000397579.6@NFIB	ENST00000397579.6	protein_coding	14313482,14306989,14179727,14155825,14150145,14146689,14125632,14120440,14102422,14087603	14314582,14307520,14179780,14155893,14150265,14146807,14125766,14120624,14102510,14088326	Gene ID= ENSG00000147862.15 TPM= 4.67 Transcript Type= protein_coding
chr9	14611071	14693471	14611071	14693471	-	ENST00000380916.8@ZDHHC21	ENST00000380916.8	protein_coding	14693229,14690337,14680033,14674187,14672830,14662215,14658749,14639896,14619639,14611071	14693471,14690385,14680162,14674385,14672928,14662326,14658887,14640012,14619682,14619098	Gene ID= ENSG00000175893.11 TPM= 7.01 Transcript Type= protein_coding
chr9	14658465	14693405	14658465	14693405	-	transcript320.chr9.nnic@ZDHHC21	transcript320.chr9.nnic	protein_coding	14693229,14690337,14677298,14674187,14672830,14662215,14658465	14693405,14690385,14680162,14674385,14672928,14662326,14658887	Gene ID= ENSG00000175893.11 TPM= 3.5 Transcript Type= NA
chr9	15163622	15307360	15163622	15307360	-	ENST00000512701.6@TTC39B	ENST00000512701.6	protein_coding	15307084,15267914,15225917,15214139,15211266,15210088,15203823,15199861,15192590,15191190,15190554,15189725,15189574,15187971,15186944,15185280,15182307,15177697,15175019,15163622	15307360,15267948,15226012,15214249,15211397,15210164,15203890,15199925,15192695,15191255,15190662,15189792,15189633,15188132,15187035,15185406,15182415,15177814,15175135,15172109	Gene ID= ENSG00000155158.20 TPM= 6.22 Transcript Type= protein_coding
chr9	15170845	15307215	15170845	15307215	-	transcript328.chr9.nic@TTC39B	transcript328.chr9.nic	protein_coding	15307084,15267914,15225917,15214139,15211266,15210088,15203823,15199861,15192590,15191190,15190554,15189725,15189574,15187971,15186944,15185280,15182307,15177697,15175019,15170845	15307215,15267948,15226012,15214249,15211397,15210164,15203890,15199925,15192695,15191255,15190662,15189792,15189633,15188132,15187035,15185528,15182415,15177814,15175135,15172109	Gene ID= ENSG00000155158.20 TPM= 2.72 Transcript Type= NA
chr9	15305570	15307295	15305570	15307295	-	transcript341.chr9.nnic@TTC39B	transcript341.chr9.nnic	protein_coding	15307084,15305570	15307295,15306274	Gene ID= ENSG00000155158.20 TPM= 5.84 Transcript Type= NA
chr9	15422872	15461627	15422872	15461627	+	transcript342.chr9.nnic@SNAPC3	transcript342.chr9.nnic	protein_coding	15422872,15423909,15433552,15444602,15447095,15451320,15453041,15457960,15459719,15460436	15423193,15423986,15433636,15444706,15447244,15451402,15453205,15458067,15460313,15461627	Gene ID= ENSG00000164975.15 TPM= 4.09 Transcript Type= NA
chr9	15422871	15462460	15422871	15462460	+	transcript352.chr9.nic@SNAPC3	transcript352.chr9.nic	protein_coding	15422871,15423909,15433552,15444602,15451320,15453041,15457960,15459719,15461631	15423193,15423986,15433636,15444706,15451402,15453205,15458067,15460313,15462460	Gene ID= ENSG00000164975.15 TPM= 2.34 Transcript Type= NA
chr9	15422866	15454251	15422866	15454251	+	transcript353.chr9.nic@SNAPC3	transcript353.chr9.nic	protein_coding	15422866,15423909,15433552,15444602,15447095,15451320,15453041	15423193,15423986,15433636,15444706,15447244,15451402,15454251	Gene ID= ENSG00000164975.15 TPM= 2.34 Transcript Type= NA
chr9	15422869	15462460	15422869	15462460	+	ENST00000490969.5@SNAPC3	ENST00000490969.5	protein_coding	15422869,15423909,15433552,15444602,15447095,15451320,15453041,15457960,15459719,15461631	15423193,15423986,15433636,15444706,15447244,15451402,15453205,15458067,15460313,15462460	Gene ID= ENSG00000164975.15 TPM= 11.09 Transcript Type= nonsense_mediated_decay
chr9	15474091	15511015	15474091	15511015	-	transcript363.chr9.nic@PSIP1	transcript363.chr9.nic	protein_coding	15510817,15510117,15506561,15489986,15486827,15486006,15479591,15478477,15474091	15511015,15510326,15506637,15490124,15486931,15486068,15479687,15478552,15474237	Gene ID= ENSG00000164985.14 TPM= 3.5 Transcript Type= NA
chr9	15464066	15510995	15464066	15510995	-	ENST00000380738.8@PSIP1	ENST00000380738.8	protein_coding	15510817,15510117,15506561,15489986,15486827,15486006,15479591,15478477,15474009,15472632,15469938,15469266,15468957,15468630,15466748,15464066	15510995,15510326,15506637,15490124,15486931,15486068,15479687,15478552,15474237,15472750,15469993,15469336,15469058,15468843,15466859,15465580	Gene ID= ENSG00000164985.14 TPM= 78.23 Transcript Type= protein_coding
chr9	15470636	15510994	15470636	15510994	-	ENST00000380716.8@PSIP1	ENST00000380716.8	protein_coding	15510817,15510117,15506561,15489986,15486827,15486006,15479591,15478477,15474009,15472632,15470636	15510994,15510326,15506637,15490124,15486931,15486068,15479687,15478552,15474237,15472750,15471231	Gene ID= ENSG00000164985.14 TPM= 4.67 Transcript Type= protein_coding
chr9	17134982	17168556	17134982	17168556	+	ENST00000484374.1@CNTLN	ENST00000484374.1	protein_coding	17134982,17143288,17166818	17135425,17143376,17168556	Gene ID= ENSG00000044459.14 TPM= 2.34 Transcript Type= processed_transcript
chr9	17579123	17797129	17579123	17797129	+	ENST00000380607.4@SH3GL2	ENST00000380607.4	protein_coding	17579123,17747066,17761437,17786381,17787380,17789392,17791231,17793367,17795544	17579287,17747134,17761509,17786524,17787513,17789550,17791334,17793497,17797129	Gene ID= ENSG00000107295.9 TPM= 8.17 Transcript Type= protein_coding
chr9	19049395	19050983	19049395	19050983	+	ENST00000380527.2@RRAGA	ENST00000380527.2	protein_coding	19049395	19050983	Gene ID= ENSG00000155876.5 TPM= 158.79 Transcript Type= protein_coding
chr9	19053143	19103119	19053143	19103119	-	ENST00000380502.7@HAUS6	ENST00000380502.7	protein_coding	19102524,19096674,19094317,19093171,19089412,19087091,19086734,19082873,19080479,19078176,19076602,19070219,19063514,19063008,19060088,19057961,19053143	19103119,19096769,19094395,19093303,19089559,19087156,19086782,19083043,19080672,19078302,19076704,19070300,19063580,19063193,19060223,19059001,19056404	Gene ID= ENSG00000147874.10 TPM= 1.17 Transcript Type= protein_coding
chr9	19115770	19127576	19115770	19127576	-	ENST00000276914.6@PLIN2	ENST00000276914.6	protein_coding	19127419,19126397,19126114,19123565,19120880,19119650,19118321,19115770	19127576,19126448,19126309,19123647,19121165,19119831,19118455,19116649	Gene ID= ENSG00000147872.9 TPM= 604.81 Transcript Type= protein_coding
chr9	19123313	19127490	19123313	19127490	-	ENST00000380464.7@PLIN2	ENST00000380464.7	protein_coding	19127419,19126397,19126114,19123313	19127490,19126448,19126309,19123647	Gene ID= ENSG00000147872.9 TPM= 1.17 Transcript Type= protein_coding
chr9	19230435	19372858	19230435	19372858	+	ENST00000602925.5@DENND4C	ENST00000602925.5	protein_coding	19230435,19276158,19286769,19288596,19290704,19296008,19298056,19299229,19300187,19305352,19316417,19316621,19324362,19325939,19326064,19328030,19331978,19334977,19336270,19340992,19342633,19345921,19350702,19352073,19352490,19356972,19357965,19360244,19361846,19369837,19371756,19372037	19230833,19276479,19287021,19288665,19290876,19296246,19298122,19299287,19300331,19305527,19316517,19316839,19324507,19325974,19326194,19328162,19332184,19335105,19336414,19341114,19342779,19347086,19350879,19352182,19352665,19357154,19358160,19360489,19361963,19369987,19371820,19372858	Gene ID= ENSG00000137145.20 TPM= 11.68 Transcript Type= protein_coding
chr9	19230476	19306742	19230476	19306742	+	transcript414.chr9.nic@DENND4C	transcript414.chr9.nic	protein_coding	19230476,19276158,19286769,19288596,19290704,19296008,19298056,19299229,19300187,19305352	19230833,19276479,19287021,19288665,19290876,19296246,19298122,19299287,19300331,19306742	Gene ID= ENSG00000137145.20 TPM= 2.34 Transcript Type= NA
chr9	19299213	19300023	19299213	19300023	-	transcript415.chr9.nnic@NA	transcript415.chr9.nnic	NA	19299213	19300023	Gene ID= novel_gene_chr9_416 TPM= 2.34 Transcript Type= NA
chr9	19375715	19380254	19375715	19380254	-	ENST00000380394.8@RPS6	ENST00000380394.8	protein_coding	19380190,19379487,19378708,19378368,19376494,19375715	19380254,19379618,19378918,19378514,19376651,19376388	Gene ID= ENSG00000137154.12 TPM= 5.25 Transcript Type= protein_coding
chr9	19376270	19380206	19376270	19380206	-	ENST00000380384.5@RPS6	ENST00000380384.5	protein_coding	19379487,19378708,19378368,19376494,19376270	19380206,19378918,19378514,19376651,19376388	Gene ID= ENSG00000137154.12 TPM= 1.75 Transcript Type= protein_coding
chr9	20341665	20622543	20341665	20622543	-	ENST00000380338.8@MLLT3	ENST00000380338.8	protein_coding	20622245,20620654,20456704,20448123,20413721,20365669,20363476,20360742,20354808,20353525,20341665	20622543,20620834,20456786,20448266,20414425,20365744,20363605,20360841,20354879,20353596,20346574	Gene ID= ENSG00000171843.15 TPM= 4.67 Transcript Type= protein_coding
chr9	20658310	20995948	20658310	20995948	+	transcript449.chr9.nnic@FOCAD	transcript449.chr9.nnic	protein_coding	20658310,20715322,20717794,20720380,20740236,20758090,20764869,20770032,20778681,20781727,20789351,20819796,20820324,20820941,20822989,20862578,20865926,20866929,20874681,20881871,20885109,20907150,20912866,20916893,20923660,20926301,20929358,20933014,20944627,20946701,20948271,20948851,20949604,20950996,20952985,20976420,20978339,20981426,20982357,20986288,20988332,20990123,20993253,20995556	20658826,20715410,20717868,20720534,20740340,20758191,20765073,20770238,20778768,20781929,20789608,20819900,20820425,20821071,20823115,20862712,20865976,20867012,20874807,20882056,20885230,20907242,20912954,20916937,20923768,20926417,20929596,20933103,20944774,20946820,20948393,20948928,20949675,20951098,20953065,20976548,20978454,20981686,20982446,20986465,20988429,20990374,20993328,20995948	Gene ID= ENSG00000188352.12 TPM= 32.31 Transcript Type= NA
chr9	20684239	20995948	20684239	20995948	+	transcript450.chr9.nic@FOCAD	transcript450.chr9.nic	protein_coding	20684239,20715322,20717794,20720380,20740236,20758090,20764869,20770032,20778681,20781727,20789351,20819796,20820324,20820941,20822989,20862578,20865926,20866929,20874681,20881871,20885109,20907150,20912866,20916893,20923660,20926301,20929358,20933014,20944627,20946701,20948271,20948851,20949604,20950996,20952985,20976420,20978339,20981426,20982357,20986288,20988332,20990123,20993253,20995556	20684293,20715410,20717868,20720534,20740340,20758191,20765073,20770238,20778768,20781929,20789608,20819900,20820425,20821071,20823115,20862712,20865976,20867012,20874807,20882056,20885230,20907242,20912954,20916937,20923768,20926417,20929596,20933103,20944774,20946820,20948393,20948928,20949675,20951098,20953065,20976548,20978454,20981686,20982446,20986465,20988429,20990374,20993328,20995948	Gene ID= ENSG00000188352.12 TPM= 27.64 Transcript Type= NA
chr9	20715321	20995955	20715321	20995955	+	ENST00000338382.10@FOCAD	ENST00000338382.10	protein_coding	20715321,20717794,20720380,20740236,20758090,20764869,20770032,20778681,20781727,20789351,20819796,20820324,20820941,20822989,20862578,20865926,20866929,20874681,20881871,20885109,20907150,20912866,20916893,20923660,20926301,20929358,20933014,20944627,20946701,20948271,20948851,20949604,20950996,20952985,20976420,20978339,20981426,20982357,20986288,20988332,20990123,20993253,20995556	20715410,20717868,20720534,20740340,20758191,20765073,20770238,20778768,20781929,20789608,20819900,20820425,20821071,20823115,20862712,20865976,20867012,20874807,20882056,20885230,20907242,20912954,20916937,20923768,20926417,20929596,20933103,20944774,20946820,20948393,20948928,20949675,20951098,20953065,20976548,20978454,20981686,20982446,20986465,20988429,20990374,20993328,20995955	Gene ID= ENSG00000188352.12 TPM= 45.15 Transcript Type= protein_coding
chr9	21003621	21031646	21003621	21031646	-	transcript461.chr9.nnic@HACD4	transcript461.chr9.nnic	protein_coding	21031400,21029295,21026596,21015898,21011589,21008021,21003621	21031646,21029398,21026723,21016010,21011695,21008146,21007119	Gene ID= ENSG00000188921.13 TPM= 4.67 Transcript Type= NA
chr9	21003621	21031622	21003621	21031622	-	transcript464.chr9.nnic@HACD4	transcript464.chr9.nnic	protein_coding	21031553,21029295,21026596,21015942,21011589,21008021,21003621	21031622,21029398,21026723,21016010,21011695,21008146,21007119	Gene ID= ENSG00000188921.13 TPM= 3.5 Transcript Type= NA
chr9	21324052	21335396	21324052	21335396	-	transcript473.chr9.nnic@KLHL9	transcript473.chr9.nnic	protein_coding	21332906,21329331,21324052	21335396,21329419,21324321	Gene ID= ENSG00000198642.6 TPM= 4.67 Transcript Type= NA
chr9	21802543	21867078	21802543	21867078	+	ENST00000380172.8@MTAP	ENST00000380172.8	protein_coding	21802543,21815433,21816714,21818035,21837908,21854631,21859303,21861976	21802781,21815519,21816772,21818202,21838010,21854870,21859425,21867078	Gene ID= ENSG00000099810.18 TPM= 5.84 Transcript Type= protein_coding
chr9	21802657	21863286	21802657	21863286	+	ENST00000419385.5@MTAP	ENST00000419385.5	protein_coding	21802657,21815433,21816714,21818035,21837908,21854631,21859303,21861976	21802781,21815544,21816772,21818202,21838010,21854870,21859425,21863286	Gene ID= ENSG00000099810.18 TPM= 5.84 Transcript Type= nonsense_mediated_decay
chr9	21967753	21994624	21967753	21994624	-	ENST00000579755.1@CDKN2A	ENST00000579755.1	protein_coding	21994139,21970902,21967753	21994624,21971208,21968242	Gene ID= ENSG00000147889.17 TPM= 1.17 Transcript Type= protein_coding
chr9	21967753	21975098	21967753	21975098	-	ENST00000304494.9@CDKN2A	ENST00000304494.9	protein_coding	21974678,21970902,21967753	21975098,21971208,21968242	Gene ID= ENSG00000147889.17 TPM= 3.5 Transcript Type= protein_coding
chr9	22002903	22009363	22002903	22009363	-	ENST00000276925.6@CDKN2B	ENST00000276925.6	protein_coding	22008798,22002903	22009363,22006247	Gene ID= ENSG00000147883.10 TPM= 12.84 Transcript Type= protein_coding
chr9	22446841	22455740	22446841	22455740	+	ENST00000325870.2@DMRTA1	ENST00000325870.2	protein_coding	22446841,22451064	22447732,22455740	Gene ID= ENSG00000176399.3 TPM= 3.5 Transcript Type= protein_coding
chr9	25677660	25678856	25677660	25678856	+	transcript505.chr9.nnic@NA	transcript505.chr9.nnic	NA	25677660	25678856	Gene ID= novel_gene_chr9_506 TPM= 5.84 Transcript Type= NA
chr9	26840685	26892804	26840685	26892804	-	ENST00000333916.7@CAAP1	ENST00000333916.7	protein_coding	26892413,26887313,26886104,26884810,26861066,26840685	26892804,26887513,26886188,26884885,26861139,26842647	Gene ID= ENSG00000120159.11 TPM= 9.34 Transcript Type= protein_coding
chr9	26918289	26947486	26918289	26947486	-	transcript533.chr9.nic@PLAA	transcript533.chr9.nic	protein_coding	26946897,26935013,26928308,26928100,26926393,26925825,26923178,26920227,26918289	26947486,26935206,26928408,26928220,26926560,26925960,26923347,26920384,26919529	Gene ID= ENSG00000137055.14 TPM= 3.5 Transcript Type= NA
chr9	26907803	26947233	26907803	26947233	-	ENST00000520884.5@PLAA	ENST00000520884.5	protein_coding	26946897,26935013,26928308,26928100,26926393,26925825,26923178,26920227,26919310,26917097,26913879,26910338,26907803	26947233,26935206,26928408,26928220,26926560,26925960,26923347,26920384,26919529,26917165,26913947,26910439,26907998	Gene ID= ENSG00000137055.14 TPM= 2.34 Transcript Type= protein_coding
chr9	26956373	27062930	26956373	27062930	+	ENST00000380062.9@IFT74	ENST00000380062.9	protein_coding	26956373,26961949,26978128,26980571,26984257,26984499,26988669,26990134,27009020,27011906,27016907,27018647,27029025,27044742,27047274,27048148,27055609,27056334,27060591,27062618	26956516,26962087,26978263,26980619,26984355,26984559,26988728,26990195,27009158,27011968,27017050,27018687,27029104,27044795,27047371,27048274,27055772,27056459,27060651,27062930	Gene ID= ENSG00000096872.15 TPM= 9.34 Transcript Type= protein_coding
chr9	26993136	27005693	26993136	27005693	-	ENST00000380055.5@LRRC19	ENST00000380055.5	protein_coding	27005592,26999614,26997728,26996311,26993136	27005693,26999703,26998241,26996499,26995849	Gene ID= ENSG00000184434.7 TPM= 1.17 Transcript Type= protein_coding
chr9	27109149	27230175	27109149	27230175	+	ENST00000380036.8@TEK	ENST00000380036.8	protein_coding	27109149,27157831,27168495,27169477,27172616,27173222,27180240,27183459,27185485,27190529,27192489,27197315,27202820,27204911,27206582,27209121,27212707,27213484,27217688,27218777,27220049,27228206,27229158	27109642,27158142,27168605,27169629,27172747,27173362,27180368,27183610,27185629,27190690,27192623,27197599,27203119,27205065,27206792,27209231,27212897,27213597,27217758,27218817,27220145,27228305,27230175	Gene ID= ENSG00000120156.20 TPM= 147.12 Transcript Type= protein_coding
chr9	27160012	27164476	27160012	27164476	-	transcript552.chr9.nnic@NA	transcript552.chr9.nnic	NA	27160012	27164476	Gene ID= novel_gene_chr9_553 TPM= 43.2 Transcript Type= NA
chr9	27215562	27217492	27215562	27217492	-	transcript554.chr9.nnic@NA	transcript554.chr9.nnic	NA	27215562	27217492	Gene ID= novel_gene_chr9_555 TPM= 3.5 Transcript Type= NA
chr9	27529300	27530695	27529300	27530695	+	transcript560.chr9.nnic@NA	transcript560.chr9.nnic	NA	27529300	27530695	Gene ID= novel_gene_chr9_561 TPM= 2.34 Transcript Type= NA
chr9	27546545	27573866	27546545	27573866	-	ENST00000619707.4@C9orf72	ENST00000619707.4	protein_coding	27573709,27566677,27565531,27562381,27561585,27560227,27558491,27556561,27550650,27548557,27546545	27573866,27567164,27565590,27562476,27561649,27560299,27558607,27556796,27550707,27548666,27548422	Gene ID= ENSG00000147894.14 TPM= 2.92 Transcript Type= protein_coding
chr9	27546546	27573450	27546546	27573450	-	ENST00000380003.7@C9orf72	ENST00000380003.7	protein_coding	27573431,27566677,27565531,27562381,27561585,27560227,27558491,27556561,27550650,27548557,27546546	27573450,27567164,27565590,27562476,27561649,27560299,27558607,27556796,27550707,27548666,27548422	Gene ID= ENSG00000147894.14 TPM= 18.1 Transcript Type= protein_coding
chr9	27546555	27573448	27546555	27573448	-	ENST00000488117.5@C9orf72	ENST00000488117.5	protein_coding	27573431,27566677,27565531,27562381,27561585,27558491,27556561,27550650,27548557,27546555	27573448,27567164,27565590,27562476,27561649,27560299,27556796,27550707,27548666,27548422	Gene ID= ENSG00000147894.14 TPM= 4.67 Transcript Type= processed_transcript
chr9	27572465	27573390	27572465	27573390	-	transcript572.chr9.nnic@NA	transcript572.chr9.nnic	NA	27572465	27573390	Gene ID= novel_gene_chr9_573 TPM= 2.34 Transcript Type= NA
chr9	32384620	32450836	32384620	32450836	+	ENST00000379923.5@ACO1	ENST00000379923.5	protein_coding	32384620,32386371,32405485,32407261,32408514,32418128,32418328,32419038,32420856,32423319,32424549,32425838,32427301,32429419,32430418,32431719,32433728,32434559,32436250,32440465,32448896,32449998	32384735,32386438,32405603,32407429,32408651,32418197,32418511,32419177,32421027,32423419,32424665,32425997,32427436,32429503,32430574,32431843,32433832,32434701,32436397,32440587,32449081,32450836	Gene ID= ENSG00000122729.18 TPM= 9.92 Transcript Type= protein_coding
chr9	32384678	32450836	32384678	32450836	+	transcript581.chr9.nnic@ACO1	transcript581.chr9.nnic	protein_coding	32384678,32399542,32405485,32407261,32408514,32418128,32418328,32419038,32420856,32423319,32424549,32425838,32427301,32429419,32430418,32431719,32433728,32434559,32436250,32440465,32448896,32449998	32384735,32399596,32405603,32407429,32408651,32418197,32418511,32419177,32421027,32423419,32424665,32425997,32427436,32429503,32430574,32431843,32433832,32434701,32436397,32440587,32449081,32450836	Gene ID= ENSG00000122729.18 TPM= 7.59 Transcript Type= NA
chr9	32455705	32526324	32455705	32526324	-	ENST00000379883.2@DDX58	ENST00000379883.2	protein_coding	32526061,32500805,32493761,32492391,32491301,32489344,32488734,32487945,32487471,32485175,32481340,32480219,32476983,32472975,32467762,32466290,32459371,32455705	32526324,32500939,32493942,32492538,32491420,32489451,32488887,32488203,32487633,32485279,32481497,32480354,32477131,32473065,32467932,32466441,32459514,32457418	Gene ID= ENSG00000107201.9 TPM= 10.51 Transcript Type= protein_coding
chr9	32540544	32552553	32540544	32552553	-	ENST00000360538.6@TOPORS	ENST00000360538.6	protein_coding	32552434,32550774,32540544	32552553,32550968,32544326	Gene ID= ENSG00000197579.7 TPM= 4.67 Transcript Type= protein_coding
chr9	32551144	32553007	32551144	32553007	+	ENST00000453396.5@SMIM27	ENST00000453396.5	protein_coding	32551144,32552234,32552801	32551693,32552479,32553007	Gene ID= ENSG00000235453.9 TPM= 9.34 Transcript Type= protein_coding
chr9	32552329	32568621	32552329	32568621	+	ENST00000451672.2@SMIM27	ENST00000451672.2	protein_coding	32552329,32566391	32552479,32568621	Gene ID= ENSG00000235453.9 TPM= 1.17 Transcript Type= protein_coding
chr9	32552999	32573162	32552999	32573162	-	ENST00000379847.7@NDUFB6	ENST00000379847.7	protein_coding	32572881,32570960,32558910,32552999	32573162,32571052,32558954,32553944	Gene ID= ENSG00000165264.10 TPM= 3.5 Transcript Type= protein_coding
chr9	32972616	33001628	32972616	33001628	-	transcript613.chr9.nic@APTX	transcript613.chr9.nic	protein_coding	33001567,32989759,32988079,32987544,32985971,32984631,32974458,32972616	33001628,32989895,32988124,32987842,32986030,32984857,32974561,32973652	Gene ID= ENSG00000137074.18 TPM= 8.17 Transcript Type= NA
chr9	32972606	33001628	32972606	33001628	-	ENST00000379825.6@APTX	ENST00000379825.6	protein_coding	33001567,32989759,32988083,32987544,32985971,32984631,32974458,32972606	33001628,32989895,32988129,32987846,32986030,32984857,32974561,32973688	Gene ID= ENSG00000137074.18 TPM= 2.34 Transcript Type= protein_coding
chr9	32972616	33001628	32972616	33001628	-	transcript619.chr9.nic@APTX	transcript619.chr9.nic	protein_coding	33001567,32989759,32988079,32987544,32985971,32974458,32972616	33001628,32989895,32988124,32987842,32986030,32974561,32973652	Gene ID= ENSG00000137074.18 TPM= 2.34 Transcript Type= NA
chr9	33023223	33025120	33023223	33025120	-	transcript630.chr9.nnic@NA	transcript630.chr9.nnic	NA	33023223	33025120	Gene ID= novel_gene_chr9_631 TPM= 2.34 Transcript Type= NA
chr9	33025211	33039907	33025211	33039907	+	ENST00000330899.4@DNAJA1	ENST00000330899.4	protein_coding	33025211,33026475,33026813,33029885,33030440,33034216,33036574,33037015,33038685	33025383,33026616,33026990,33029989,33030667,33034330,33036689,33037115,33039907	Gene ID= ENSG00000086061.15 TPM= 204.33 Transcript Type= protein_coding
chr9	33046552	33076703	33046552	33076703	-	transcript639.chr9.nic@SMU1	transcript639.chr9.nic	protein_coding	33076583,33073596,33071740,33068824,33062049,33060465,33057598,33056837,33053123,33048106,33046552	33076703,33073806,33071892,33068934,33062177,33060584,33057714,33056964,33056239,33048258,33047391	Gene ID= ENSG00000122692.8 TPM= 2.92 Transcript Type= NA
chr9	33046552	33076703	33046552	33076703	-	transcript640.chr9.nnic@SMU1	transcript640.chr9.nnic	protein_coding	33076583,33073596,33071740,33068824,33062049,33060465,33057598,33056837,33056113,33048106,33046552	33076703,33073806,33071892,33068934,33062177,33060584,33057714,33056964,33056239,33048258,33047391	Gene ID= ENSG00000122692.8 TPM= 2.92 Transcript Type= NA
chr9	33110637	33167356	33110637	33167356	-	ENST00000379731.4@B4GALT1	ENST00000379731.4	protein_coding	33166758,33135189,33120419,33115991,33113774,33110637	33167356,33135424,33120606,33116113,33113878,33113586	Gene ID= ENSG00000086062.12 TPM= 28.02 Transcript Type= protein_coding
chr9	33255049	33264720	33255049	33264720	-	ENST00000379707.7@BAG1	ENST00000379707.7	protein_coding	33264224,33262702,33262105,33261087,33258920,33256801,33255865,33255049	33264720,33262830,33262246,33261169,33259033,33256908,33255927,33255308	Gene ID= ENSG00000107262.19 TPM= 5.84 Transcript Type= nonsense_mediated_decay
chr9	33264942	33281539	33264942	33281539	+	ENST00000223500.8@CHMP5	ENST00000223500.8	protein_coding	33264942,33266010,33267853,33270623,33271152,33276456,33278113,33280809	33265147,33266114,33267899,33270716,33271223,33276564,33278225,33281539	Gene ID= ENSG00000086065.13 TPM= 172.8 Transcript Type= protein_coding
chr9	33290499	33345193	33290499	33345193	+	transcript677.chr9.nic@NFX1	transcript677.chr9.nic	protein_coding	33290499,33294420,33301263,33303191,33307194,33311106,33313654,33318731,33318910,33328581,33332472,33338510,33342746,33344069	33290597,33295427,33301421,33303268,33307299,33311177,33313793,33318830,33319127,33328678,33332502,33338589,33342854,33345193	Gene ID= ENSG00000086102.18 TPM= 4.67 Transcript Type= NA
chr9	33290545	33348723	33290545	33348723	+	ENST00000318524.6@NFX1	ENST00000318524.6	protein_coding	33290545,33294420,33301263,33303191,33307194,33311106,33313654,33318731,33318910,33328581,33332472,33338510,33342746,33344069,33347038,33347663	33290597,33295427,33301421,33303268,33307299,33311177,33313793,33318830,33319127,33328678,33332502,33338589,33342854,33344188,33347117,33348723	Gene ID= ENSG00000086102.18 TPM= 32.69 Transcript Type= protein_coding
chr9	33290511	33371157	33290511	33371157	+	ENST00000379540.7@NFX1	ENST00000379540.7	protein_coding	33290511,33294420,33301263,33303191,33307194,33311106,33313654,33318731,33318910,33328581,33332472,33338510,33342746,33344069,33347038,33351560,33352646,33354086,33354851,33364010,33364708,33366629,33367515,33369906	33290597,33295427,33301421,33303268,33307299,33311177,33313793,33318830,33319127,33328678,33332502,33338589,33342854,33344188,33347117,33351790,33352719,33354187,33354892,33364108,33364774,33366774,33367619,33371157	Gene ID= ENSG00000086102.18 TPM= 19.85 Transcript Type= protein_coding
chr9	33441154	33447611	33441154	33447611	-	ENST00000297991.4@AQP3	ENST00000297991.4	protein_coding	33447423,33443766,33443321,33442852,33442301,33441154	33447611,33443892,33443458,33442970,33442518,33442211	Gene ID= ENSG00000165272.14 TPM= 522.7 Transcript Type= protein_coding
chr9	33469282	33472992	33469282	33472992	-	transcript703.chr9.nic@NOL6	transcript703.chr9.nic	protein_coding	33472206,33469282	33472992,33472120	Gene ID= ENSG00000165271.16 TPM= 2.34 Transcript Type= NA
chr9	33461452	33473930	33461452	33473930	-	ENST00000297990.8@NOL6	ENST00000297990.8	protein_coding	33473789,33472206,33472004,33470012,33469499,33469207,33468958,33468752,33468508,33468321,33468030,33467691,33467394,33467114,33466912,33466569,33466308,33466071,33465734,33465207,33464879,33464037,33463831,33463247,33463033,33461452	33473930,33472412,33472120,33470191,33469667,33469341,33469121,33468872,33468566,33468422,33468145,33467868,33467516,33467262,33466987,33466709,33466425,33466225,33465897,33465359,33464976,33464161,33463920,33463441,33463134,33462813	Gene ID= ENSG00000165271.16 TPM= 38.53 Transcript Type= protein_coding
chr9	33817433	33917985	33817433	33917985	+	transcript713.chr9.nnic@UBE2R2	transcript713.chr9.nnic	protein_coding	33817433,33900174,33911964,33917018	33817934,33900271,33912098,33917985	Gene ID= ENSG00000107341.4 TPM= 7.01 Transcript Type= NA
chr9	33817567	33920404	33817567	33920404	+	ENST00000263228.3@UBE2R2	ENST00000263228.3	protein_coding	33817567,33886881,33900174,33911964,33917018	33817934,33886967,33900271,33912098,33920404	Gene ID= ENSG00000107341.4 TPM= 13.43 Transcript Type= protein_coding
chr9	33897026	33899531	33897026	33899531	-	transcript717.chr9.nnic@NA	transcript717.chr9.nnic	NA	33897026	33899531	Gene ID= novel_gene_chr9_718 TPM= 4.67 Transcript Type= NA
chr9	33921693	34048901	33921693	34048901	-	ENST00000379238.5@UBAP2	ENST00000379238.5	protein_coding	34048825,34017050,33998787,33996223,33988973,33986760,33973183,33971651,33963726,33960826,33956079,33953285,33948374,33944365,33943420,33941649,33935839,33933490,33932562,33927797,33926989,33926617,33924206,33923795,33923379,33923186,33922966,33922687,33921693	34048901,34017189,33998864,33996333,33989126,33986837,33973237,33971754,33963791,33960878,33956146,33953474,33948587,33944639,33943589,33941862,33935878,33933628,33932628,33927992,33927080,33926664,33924284,33924000,33923478,33923293,33923033,33922878,33922599	Gene ID= ENSG00000137073.21 TPM= 8.56 Transcript Type= protein_coding
chr9	33921693	34048949	33921693	34048949	-	ENST00000360802.5@UBAP2	ENST00000360802.5	protein_coding	34048878,34017050,33998787,33996223,33988973,33986760,33973183,33971651,33963726,33960826,33956079,33953285,33948374,33944365,33943420,33941649,33935839,33933490,33932562,33927797,33926989,33926617,33924206,33923795,33923379,33923186,33922966,33922687,33921693	34048949,34017189,33998864,33996333,33989126,33986837,33973237,33971754,33963791,33960878,33956146,33953474,33948587,33944639,33943589,33941862,33935878,33933628,33932628,33927992,33927080,33926664,33924284,33924000,33923478,33923293,33923033,33922878,33922599	Gene ID= ENSG00000137073.21 TPM= 6.22 Transcript Type= protein_coding
chr9	33921693	34049197	33921693	34049197	-	transcript722.chr9.nnic@UBAP2	transcript722.chr9.nnic	protein_coding	34049149,34017050,33998787,33996223,33988973,33986760,33973183,33971651,33963726,33960826,33956079,33953285,33948374,33944365,33943420,33941649,33935839,33933490,33932562,33927797,33926989,33926617,33924206,33923795,33923379,33923186,33922966,33922687,33921693	34049197,34017189,33998864,33996333,33989126,33986837,33973237,33971754,33963791,33960878,33956146,33953474,33948587,33944639,33943589,33941862,33935878,33933628,33932628,33927992,33927080,33926664,33924284,33924000,33923478,33923293,33923033,33922878,33922599	Gene ID= ENSG00000137073.21 TPM= 7.39 Transcript Type= NA
chr9	33921693	34048901	33921693	34048901	-	transcript725.chr9.nic@UBAP2	transcript725.chr9.nic	protein_coding	34048825,34017050,33998787,33996223,33988973,33986760,33963726,33960826,33956079,33953285,33948374,33944365,33943420,33941649,33935839,33933490,33932562,33927797,33926989,33926617,33924206,33923795,33923379,33923186,33922966,33922687,33921693	34048901,34017189,33998864,33996333,33989126,33986837,33963791,33960878,33956146,33953474,33948587,33944639,33943589,33941862,33935878,33933628,33932628,33927992,33927080,33926664,33924284,33924000,33923478,33923293,33923033,33922878,33922599	Gene ID= ENSG00000137073.21 TPM= 7.01 Transcript Type= NA
chr9	34086387	34126773	34086387	34126773	-	ENST00000361264.8@DCAF12	ENST00000361264.8	protein_coding	34126354,34125023,34107359,34106434,34098324,34096716,34093286,34089412,34086387	34126773,34125277,34107565,34106494,34098517,34096781,34093448,34089590,34088508	Gene ID= ENSG00000198876.12 TPM= 91.07 Transcript Type= protein_coding
chr9	34086389	34126745	34086389	34126745	-	transcript738.chr9.nnic@DCAF12	transcript738.chr9.nnic	protein_coding	34126354,34125023,34107359,34106434,34098324,34096716,34093286,34086389	34126745,34125277,34107565,34106494,34098517,34096781,34093448,34088508	Gene ID= ENSG00000198876.12 TPM= 7.01 Transcript Type= NA
chr9	34179029	34252523	34179029	34252523	+	transcript753.chr9.nnic@UBAP1	transcript753.chr9.nnic	protein_coding	34179029,34216674,34220908,34234216,34241185,34249779,34250658,34251392	34179240,34216789,34220948,34234340,34242108,34249961,34250759,34252523	Gene ID= ENSG00000165006.13 TPM= 13.23 Transcript Type= NA
chr9	34179013	34252523	34179013	34252523	+	ENST00000297661.8@UBAP1	ENST00000297661.8	protein_coding	34179013,34220908,34234216,34241185,34249779,34250658,34251392	34179240,34220948,34234340,34242108,34249961,34250759,34252523	Gene ID= ENSG00000165006.13 TPM= 90.29 Transcript Type= protein_coding
chr9	34329506	34343711	34329506	34343711	+	ENST00000618590.1@NUDT2	ENST00000618590.1	protein_coding	34329506,34339024,34343124	34329599,34339166,34343711	Gene ID= ENSG00000164978.17 TPM= 2.34 Transcript Type= protein_coding
chr9	34366670	34376853	34366670	34376853	-	ENST00000297625.7@KIAA1161	ENST00000297625.7	protein_coding	34376793,34366670	34376853,34373006	Gene ID= ENSG00000164976.8 TPM= 12.84 Transcript Type= protein_coding
chr9	34398190	34403544	34398190	34403544	-	transcript778.chr9.nic@FAM219A	transcript778.chr9.nic	protein_coding	34402705,34402387,34401666,34398190	34403544,34402467,34401720,34401122	Gene ID= ENSG00000164970.14 TPM= 12.35 Transcript Type= NA
chr9	34398190	34458570	34398190	34458570	-	ENST00000297620.8@FAM219A	ENST00000297620.8	protein_coding	34458204,34405916,34402705,34402387,34401666,34398190	34458570,34405964,34402807,34402467,34401720,34401122	Gene ID= ENSG00000164970.14 TPM= 18.19 Transcript Type= protein_coding
chr9	34398184	34458552	34398184	34458552	-	ENST00000379080.5@FAM219A	ENST00000379080.5	protein_coding	34458237,34405865,34402705,34402387,34401666,34398184	34458552,34405964,34402807,34402467,34401720,34401119	Gene ID= ENSG00000164970.14 TPM= 10.8 Transcript Type= protein_coding
chr9	34398184	34458552	34398184	34458552	-	ENST00000379081.5@FAM219A	ENST00000379081.5	protein_coding	34458237,34405916,34402705,34402387,34401666,34398184	34458552,34405964,34402807,34402467,34401720,34401122	Gene ID= ENSG00000164970.14 TPM= 14.69 Transcript Type= protein_coding
chr9	34446199	34449006	34446199	34449006	+	transcript779.chr9.nnic@NA	transcript779.chr9.nnic	NA	34446199	34449006	Gene ID= novel_gene_chr9_780 TPM= 4.67 Transcript Type= NA
chr9	34521040	34523041	34521040	34523041	-	ENST00000399775.2@ENHO	ENST00000399775.2	protein_coding	34522777,34521040	34523041,34521856	Gene ID= ENSG00000168913.6 TPM= 2.34 Transcript Type= protein_coding
chr9	34610486	34612104	34610486	34612104	-	ENST00000378959.8@RPP25L	ENST00000378959.8	protein_coding	34612064,34610486	34612104,34611332	Gene ID= ENSG00000164967.9 TPM= 21.02 Transcript Type= protein_coding
chr9	34610486	34612104	34610486	34612104	-	ENST00000297613.4@RPP25L	ENST00000297613.4	protein_coding	34611860,34610486	34612104,34611332	Gene ID= ENSG00000164967.9 TPM= 9.34 Transcript Type= protein_coding
chr9	34613551	34620480	34613551	34620480	-	ENST00000259632.11@DCTN3	ENST00000259632.11	protein_coding	34620369,34618676,34617885,34616030,34614710,34614042,34613551	34620480,34618760,34617971,34616113,34614768,34614101,34613871	Gene ID= ENSG00000137100.15 TPM= 57.21 Transcript Type= protein_coding
chr9	34634722	34637771	34634722	34637771	-	ENST00000277010.8@SIGMAR1	ENST00000277010.8	protein_coding	34637547,34637220,34636997,34634722	34637771,34637420,34637089,34635858	Gene ID= ENSG00000147955.16 TPM= 88.74 Transcript Type= protein_coding
chr9	34646675	34650583	34646675	34650583	+	transcript818.chr9.nic@GALT	transcript818.chr9.nic	protein_coding	34646675,34647089,34647492,34647657,34647832,34648115,34648334,34648762,34648998,34650369	34646786,34647258,34647567,34647705,34647961,34648171,34648456,34648894,34649564,34650583	Gene ID= ENSG00000213930.11 TPM= 11.68 Transcript Type= NA
chr9	34646607	34650583	34646607	34650583	+	transcript824.chr9.nic@GALT	transcript824.chr9.nic	protein_coding	34646607,34647089,34647492,34647657,34647832,34648115,34648334,34650369	34646786,34647258,34647567,34647705,34647961,34648171,34649564,34650583	Gene ID= ENSG00000213930.11 TPM= 11.68 Transcript Type= NA
chr9	34646607	34650583	34646607	34650583	+	transcript833.chr9.nic@GALT	transcript833.chr9.nic	protein_coding	34646607,34647089,34648115,34648334,34650369	34646786,34647961,34648171,34649564,34650583	Gene ID= ENSG00000213930.11 TPM= 2.34 Transcript Type= NA
chr9	34653436	34661887	34653436	34661887	+	transcript811.chr9.nic@IL11RA	transcript811.chr9.nic	protein_coding	34653436,34655605,34656739,34657035,34657303,34657421,34658520,34659759,34660274,34660504,34660854,34661482	34655317,34655665,34656908,34657149,34657335,34657587,34658683,34659900,34660393,34660600,34660936,34661887	Gene ID= ENSG00000137070.17 TPM= 5.64 Transcript Type= NA
chr9	34652192	34661887	34652192	34661887	+	ENST00000441545.6@IL11RA	ENST00000441545.6	protein_coding	34652192,34655218,34655605,34656739,34657035,34657303,34657421,34658520,34659759,34660274,34660504,34660854,34661482	34652233,34655317,34655665,34656908,34657149,34657335,34657587,34658683,34659900,34660393,34660600,34660936,34661887	Gene ID= ENSG00000137070.17 TPM= 18.48 Transcript Type= protein_coding
chr9	34653935	34661892	34653935	34661892	+	ENST00000318041.13@IL11RA	ENST00000318041.13	protein_coding	34653935,34655218,34655605,34656739,34657035,34657303,34657421,34658520,34659759,34660274,34660504,34660854,34661482	34653999,34655317,34655665,34656908,34657149,34657335,34657587,34658683,34659900,34660393,34660600,34660936,34661892	Gene ID= ENSG00000137070.17 TPM= 7.39 Transcript Type= protein_coding
chr9	34665032	34666028	34665032	34666028	-	ENST00000544078.2@AL162231.1	ENST00000544078.2	protein_coding	34665978,34665613,34665314,34665032	34666028,34665680,34665373,34665190	Gene ID= ENSG00000187186.14 TPM= 2.34 Transcript Type= protein_coding
chr9	34689567	34691277	34689567	34691277	-	ENST00000311925.6@CCL19	ENST00000311925.6	protein_coding	34691091,34690210,34689930,34689567	34691277,34690342,34690023,34689839	Gene ID= ENSG00000172724.11 TPM= 2.34 Transcript Type= protein_coding
chr9	34709005	34710124	34709005	34710124	-	ENST00000259607.6@CCL21	ENST00000259607.6	protein_coding	34710000,34709777,34709500,34709005	34710124,34709897,34709682,34709427	Gene ID= ENSG00000137077.7 TPM= 18.68 Transcript Type= protein_coding
chr9	34989694	34998431	34989694	34998431	+	ENST00000312316.9@DNAJB5	ENST00000312316.9	protein_coding	34989694,34993200,34996265,34997026	34989831,34993444,34996866,34998431	Gene ID= ENSG00000137094.14 TPM= 3.5 Transcript Type= protein_coding
chr9	35056064	35073249	35056064	35073249	-	ENST00000358901.10@VCP	ENST00000358901.10	protein_coding	35072337,35068251,35067891,35066675,35065251,35064154,35062978,35062217,35062003,35061577,35061015,35060801,35060313,35059493,35059064,35057376,35056064	35073249,35068362,35068063,35066817,35065381,35064285,35063080,35062350,35062138,35061689,35061179,35060923,35060525,35059801,35059219,35057530,35057222	Gene ID= ENSG00000165280.15 TPM= 96.79 Transcript Type= protein_coding
chr9	35073838	35080016	35073838	35080016	-	ENST00000378643.7@FANCG	ENST00000378643.7	protein_coding	35079441,35079151,35078605,35078141,35077264,35076971,35076724,35076432,35075962,35075465,35075279,35074927,35074371,35073838	35080016,35079241,35078736,35078343,35077399,35077101,35076870,35076583,35076028,35075754,35075325,35075082,35074494,35074216	Gene ID= ENSG00000221829.9 TPM= 15.18 Transcript Type= protein_coding
chr9	35088691	35096650	35088691	35096650	-	transcript902.chr9.nic@PIGO	transcript902.chr9.nic	protein_coding	35096561,35095055,35094216,35093901,35093421,35093030,35091240,35090466,35090066,35089380,35088691	35096650,35095566,35094359,35094024,35093580,35093209,35092767,35090672,35090280,35089450,35089221	Gene ID= ENSG00000165282.13 TPM= 36.2 Transcript Type= NA
chr9	35088689	35096601	35088689	35096601	-	ENST00000361778.6@PIGO	ENST00000361778.6	protein_coding	35096561,35095055,35094216,35093901,35093421,35093030,35092543,35091240,35090466,35090066,35089380,35088689	35096601,35095566,35094359,35094024,35093580,35093209,35092767,35091291,35090672,35090280,35089450,35089221	Gene ID= ENSG00000165282.13 TPM= 36.2 Transcript Type= protein_coding
chr9	35099776	35103195	35099776	35103195	-	ENST00000619795.4@STOML2	ENST00000619795.4	protein_coding	35103050,35102095,35101904,35101710,35101426,35101135,35100932,35100598,35099776	35103195,35102194,35101962,35101811,35101560,35101279,35101011,35100726,35100172	Gene ID= ENSG00000165283.15 TPM= 1.17 Transcript Type= protein_coding
chr9	35099891	35103157	35099891	35103157	-	ENST00000356493.9@STOML2	ENST00000356493.9	protein_coding	35103050,35102686,35102095,35101904,35101710,35101426,35101135,35100932,35100598,35099891	35103157,35102823,35102194,35101962,35101811,35101560,35101279,35101011,35100726,35100172	Gene ID= ENSG00000165283.15 TPM= 122.6 Transcript Type= protein_coding
chr9	35104121	35111588	35104121	35111588	-	ENST00000603301.5@FAM214B	ENST00000603301.5	protein_coding	35111269,35108594,35107381,35106833,35106538,35106252,35105941,35105682,35104121	35111588,35108737,35108349,35106891,35106643,35106410,35106009,35105857,35105374	Gene ID= ENSG00000005238.19 TPM= 18.1 Transcript Type= protein_coding
chr9	35104121	35115986	35104121	35115986	-	transcript912.chr9.nic@FAM214B	transcript912.chr9.nic	protein_coding	35115671,35108594,35107381,35106833,35106538,35106252,35105941,35105682,35104121	35115986,35108737,35108349,35106891,35106643,35106410,35106009,35105857,35105374	Gene ID= ENSG00000005238.19 TPM= 22.77 Transcript Type= NA
chr9	35162062	35405338	35162062	35405338	+	ENST00000378495.7@UNC13B	ENST00000378495.7	protein_coding	35162062,35228015,35231120,35236469,35237703,35243291,35258993,35295696,35310467,35313899,35366947,35370318,35375127,35376028,35377468,35378295,35380470,35381100,35381556,35382357,35384246,35385724,35386165,35389846,35390629,35396476,35396841,35397167,35397635,35398211,35398554,35398882,35399161,35399392,35399649,35400296,35403167,35403440,35403748	35162305,35228044,35231219,35236586,35237826,35243364,35259050,35295930,35310781,35313989,35366993,35370396,35375201,35376247,35377695,35378436,35380639,35381215,35381719,35382507,35384314,35385813,35386293,35389973,35390714,35396602,35396937,35397310,35397712,35398288,35398642,35399034,35399284,35399448,35399729,35400443,35403259,35403599,35405338	Gene ID= ENSG00000198722.14 TPM= 71.22 Transcript Type= protein_coding
chr9	35538632	35561898	35538632	35561898	+	ENST00000455600.1@RUSC2	ENST00000455600.1	protein_coding	35538632,35546430,35555060,35555952,35556308,35557914,35558197,35558462,35559226,35560029,35560960,35561181	35539108,35548535,35555701,35556137,35556448,35557990,35558371,35558567,35559272,35560851,35561097,35561898	Gene ID= ENSG00000198853.11 TPM= 30.36 Transcript Type= protein_coding
chr9	35605269	35610032	35605269	35610032	+	transcript933.chr9.nic@TESK1	transcript933.chr9.nic	protein_coding	35605269,35605474,35605984,35606237,35606837,35607582,35607928,35608160,35608395,35608862	35605425,35605838,35606105,35606285,35607409,35607672,35608011,35608249,35608509,35610032	Gene ID= ENSG00000107140.15 TPM= 11.68 Transcript Type= NA
chr9	35605305	35610032	35605305	35610032	+	ENST00000620767.4@TESK1	ENST00000620767.4	protein_coding	35605305,35605474,35605984,35606237,35606837,35607327,35607582,35607928,35608160,35608395,35608862	35605425,35605838,35606105,35606285,35606983,35607409,35607672,35608011,35608249,35608509,35610032	Gene ID= ENSG00000107140.15 TPM= 27.44 Transcript Type= protein_coding
chr9	35605370	35610032	35605370	35610032	+	ENST00000336395.5@TESK1	ENST00000336395.5	protein_coding	35605370,35605984,35606237,35606837,35607327,35607582,35607928,35608160,35608395,35608862	35605838,35606105,35606285,35606983,35607409,35607672,35608011,35608249,35608509,35610032	Gene ID= ENSG00000107140.15 TPM= 16.93 Transcript Type= protein_coding
chr9	35649303	35650950	35649303	35650950	-	ENST00000618781.1@SIT1	ENST00000618781.1	protein_coding	35650754,35650417,35650357,35650184,35649303	35650950,35650637,35650414,35650245,35650081	Gene ID= ENSG00000137078.8 TPM= 1.17 Transcript Type= protein_coding
chr9	35649295	35650940	35649295	35650940	-	ENST00000259608.7@SIT1	ENST00000259608.7	protein_coding	35650754,35650502,35650357,35650184,35649295	35650940,35650637,35650415,35650245,35650081	Gene ID= ENSG00000137078.8 TPM= 3.5 Transcript Type= protein_coding
chr9	35658290	35661499	35658290	35661499	+	ENST00000378409.7@CCDC107	ENST00000378409.7	protein_coding	35658290,35658576,35660401,35660557,35660746,35660940	35658485,35658727,35660461,35660647,35660858,35661499	Gene ID= ENSG00000159884.11 TPM= 23.35 Transcript Type= protein_coding
chr9	35658293	35661184	35658293	35661184	+	transcript949.chr9.nic@CCDC107	transcript949.chr9.nic	protein_coding	35658293,35658576,35660401,35660746	35658485,35658727,35660647,35661184	Gene ID= ENSG00000159884.11 TPM= 2.34 Transcript Type= NA
chr9	35658314	35661187	35658314	35661187	+	ENST00000378406.5@CCDC107	ENST00000378406.5	protein_coding	35658314,35658576,35660401,35660557	35658485,35658727,35660461,35661187	Gene ID= ENSG00000159884.11 TPM= 7.01 Transcript Type= protein_coding
chr9	35658317	35661177	35658317	35661177	+	ENST00000327351.6@CCDC107	ENST00000327351.6	protein_coding	35658317,35658576,35660401,35660557,35660766,35660940	35658485,35658727,35660461,35660647,35660858,35661177	Gene ID= ENSG00000159884.11 TPM= 26.85 Transcript Type= protein_coding
chr9	35658304	35661186	35658304	35661186	+	ENST00000378407.7@CCDC107	ENST00000378407.7	protein_coding	35658304,35658576,35660401,35660557,35660774	35658485,35658727,35660461,35660647,35661186	Gene ID= ENSG00000159884.11 TPM= 10.51 Transcript Type= protein_coding
chr9	35682014	35691114	35682014	35691114	-	transcript951.chr9.nnic@TPM2	transcript951.chr9.nnic	protein_coding	35689704,35689146,35685647,35685434,35685269,35685064,35684732,35684488,35684246,35682014	35691114,35689271,35685780,35685551,35685339,35685139,35684807,35684550,35684315,35682163	Gene ID= ENSG00000198467.13 TPM= 42.03 Transcript Type= NA
chr9	35682014	35689928	35682014	35689928	-	transcript955.chr9.nic@TPM2	transcript955.chr9.nic	protein_coding	35689704,35689146,35685647,35685434,35685269,35685064,35684488,35684246,35682014	35689928,35689271,35685780,35685551,35685339,35685139,35684550,35684315,35683241	Gene ID= ENSG00000198467.13 TPM= 4.67 Transcript Type= NA
chr9	35682014	35691114	35682014	35691114	-	transcript957.chr9.nic@TPM2	transcript957.chr9.nic	protein_coding	35689704,35689146,35685647,35685434,35685269,35684488,35684246,35682014	35691114,35689271,35685780,35685551,35685339,35685139,35684315,35682163	Gene ID= ENSG00000198467.13 TPM= 12.84 Transcript Type= NA
chr9	35681992	35691020	35681992	35691020	-	ENST00000378292.7@TPM2	ENST00000378292.7	protein_coding	35689704,35689146,35685647,35685434,35685269,35685064,35684488,35684246,35681992	35691020,35689271,35685780,35685551,35685339,35685139,35684550,35684315,35682163	Gene ID= ENSG00000198467.13 TPM= 124.93 Transcript Type= protein_coding
chr9	35696948	35732395	35696948	35732395	-	ENST00000314888.9@TLN1	ENST00000314888.9	protein_coding	35732075,35725565,35725224,35724830,35724572,35724192,35723952,35722861,35722119,35721648,35720812,35720433,35720039,35719740,35719519,35719074,35718812,35717619,35717146,35716390,35715059,35714760,35714574,35714239,35713953,35713196,35712835,35712005,35711595,35711255,35710989,35710797,35710561,35708341,35707731,35707348,35707072,35706768,35706450,35706196,35705962,35705750,35705551,35704669,35704332,35703991,35703775,35703560,35700191,35699974,35699356,35699032,35698808,35698617,35698323,35698044,35696948	35732395,35725727,35725321,35724959,35724724,35724334,35724079,35722921,35722223,35721803,35720913,35720509,35720219,35719853,35719627,35719282,35718910,35717786,35717440,35716556,35715187,35714876,35714687,35714373,35714081,35713298,35713043,35712124,35711792,35711394,35711082,35710886,35710683,35708484,35707892,35707488,35707253,35706900,35706551,35706366,35706111,35705851,35705670,35704815,35704498,35704174,35703900,35703676,35700376,35700081,35699461,35699156,35698933,35698679,35698505,35698172,35697916	Gene ID= ENSG00000137076.20 TPM= 121.43 Transcript Type= protein_coding
chr9	35732335	35737004	35732335	35737004	+	ENST00000353704.2@CREB3	ENST00000353704.2	protein_coding	35732335,35732996,35733215,35733396,35735109,35735306,35736048,35736227,35736392	35732901,35733143,35733282,35733485,35735215,35735374,35736132,35736311,35737004	Gene ID= ENSG00000107175.11 TPM= 16.35 Transcript Type= protein_coding
chr9	35732598	35736860	35732598	35736860	+	ENST00000486056.1@CREB3	ENST00000486056.1	protein_coding	35732598,35732996,35733396,35735109,35735306,35736048,35736227,35736392	35732901,35733282,35733485,35735215,35735374,35736132,35736311,35736860	Gene ID= ENSG00000107175.11 TPM= 7.01 Transcript Type= processed_transcript
chr9	35736866	35749218	35736866	35749218	-	transcript971.chr9.nnic@GBA2	transcript971.chr9.nnic	protein_coding	35748346,35744615,35744297,35741672,35740825,35740526,35740209,35739998,35739628,35739315,35739002,35738818,35738526,35738232,35738037,35737748,35736866	35749218,35744706,35744412,35741890,35741064,35740628,35740362,35740123,35739800,35739419,35739109,35738903,35738632,35738374,35738152,35737939,35737447	Gene ID= ENSG00000070610.14 TPM= 4.67 Transcript Type= NA
chr9	35736866	35749206	35736866	35749206	-	transcript983.chr9.nnic@GBA2	transcript983.chr9.nnic	protein_coding	35748346,35744615,35744297,35740825,35740526,35740209,35739998,35739628,35739315,35739002,35738752,35738526,35738232,35738037,35737748,35736866	35749206,35744706,35744412,35741064,35740628,35740362,35740123,35739800,35739419,35739109,35738903,35738632,35738374,35738152,35737939,35737447	Gene ID= ENSG00000070610.14 TPM= 5.84 Transcript Type= NA
chr9	35736866	35749201	35736866	35749201	-	transcript988.chr9.nic@GBA2	transcript988.chr9.nic	protein_coding	35748346,35744615,35744297,35741672,35740825,35740526,35740209,35739998,35739628,35739315,35739002,35738526,35738232,35738037,35737748,35736866	35749201,35744706,35744412,35741890,35741064,35740628,35740362,35740123,35739800,35739419,35739109,35738903,35738374,35738152,35737939,35737447	Gene ID= ENSG00000070610.14 TPM= 5.84 Transcript Type= NA
chr9	35736867	35749276	35736867	35749276	-	transcript992.chr9.nic@GBA2	transcript992.chr9.nic	protein_coding	35748346,35744615,35744297,35741672,35740825,35740526,35740209,35739998,35739628,35739315,35739002,35738752,35738526,35738232,35738037,35736867	35749276,35744706,35744412,35741890,35741064,35740628,35740362,35740123,35739800,35739419,35739109,35738903,35738632,35738374,35738152,35737939	Gene ID= ENSG00000070610.14 TPM= 10.51 Transcript Type= NA
chr9	35736866	35749202	35736866	35749202	-	transcript997.chr9.nic@GBA2	transcript997.chr9.nic	protein_coding	35748346,35744615,35744297,35741672,35740825,35740526,35740209,35739998,35739628,35739315,35739002,35738752,35738037,35737748,35736866	35749202,35744706,35744412,35741890,35741064,35740628,35740362,35740123,35739800,35739419,35739109,35738903,35738632,35737939,35737447	Gene ID= ENSG00000070610.14 TPM= 4.67 Transcript Type= NA
chr9	35736867	35749207	35736867	35749207	-	transcript1011.chr9.nic@GBA2	transcript1011.chr9.nic	protein_coding	35748346,35744615,35744297,35741672,35740825,35740526,35740209,35739998,35739628,35739315,35739002,35738037,35736867	35749207,35744706,35744412,35741890,35741064,35740628,35740362,35740123,35739800,35739419,35739109,35738903,35737939	Gene ID= ENSG00000070610.14 TPM= 6.22 Transcript Type= NA
chr9	35736866	35749228	35736866	35749228	-	ENST00000378103.7@GBA2	ENST00000378103.7	protein_coding	35748346,35744615,35744297,35741672,35740825,35740526,35740209,35739998,35739628,35739315,35739002,35738752,35738526,35738232,35738037,35737748,35736866	35749228,35744706,35744412,35741890,35741064,35740628,35740362,35740123,35739800,35739419,35739109,35738903,35738632,35738374,35738152,35737939,35737447	Gene ID= ENSG00000070610.14 TPM= 88.35 Transcript Type= protein_coding
chr9	35736867	35749218	35736867	35749218	-	ENST00000378094.4@GBA2	ENST00000378094.4	protein_coding	35748346,35744615,35744297,35741672,35740825,35740526,35740209,35739998,35739628,35739315,35739002,35738752,35738526,35738232,35738037,35737748,35736867	35749218,35744706,35744412,35741890,35741064,35740628,35740362,35740123,35739800,35739419,35739109,35738903,35738632,35738374,35738152,35737939,35737604	Gene ID= ENSG00000070610.14 TPM= 3.12 Transcript Type= protein_coding
chr9	35749287	35758575	35749287	35758575	+	ENST00000378078.4@RGP1	ENST00000378078.4	protein_coding	35749287,35749737,35750243,35750658,35750840,35751266,35751627,35751956,35752651	35749408,35749871,35750379,35750741,35750989,35751412,35751754,35752145,35758575	Gene ID= ENSG00000107185.9 TPM= 15.18 Transcript Type= protein_coding
chr9	35812960	35815021	35812960	35815021	-	ENST00000259667.5@HINT2	ENST00000259667.5	protein_coding	35814899,35813644,35813445,35813266,35812960	35815021,35813784,35813549,35813338,35813145	Gene ID= ENSG00000137133.10 TPM= 28.02 Transcript Type= protein_coding
chr9	35829251	35847235	35829251	35847235	+	transcript1049.chr9.nic@TMEM8B	transcript1049.chr9.nic	protein_coding	35829251,35841134,35841526,35842392,35845975,35846258,35846469,35846817	35829955,35841267,35841794,35842717,35846068,35846381,35846611,35847235	Gene ID= ENSG00000137103.17 TPM= 5.84 Transcript Type= NA
chr9	35842396	35854425	35842396	35854425	+	transcript1051.chr9.nic@TMEM8B	transcript1051.chr9.nic	protein_coding	35842396,35846258,35846469,35846817,35852827,35853141,35853505	35846068,35846381,35846611,35846995,35852973,35853257,35854425	Gene ID= ENSG00000137103.17 TPM= 4.67 Transcript Type= NA
chr9	35906192	35907141	35906192	35907141	+	ENST00000354323.2@HRCT1	ENST00000354323.2	protein_coding	35906192	35907141	Gene ID= ENSG00000196196.2 TPM= 8.17 Transcript Type= protein_coding
chr9	35909483	35911686	35909483	35911686	+	ENST00000443779.1@SPAAR	ENST00000443779.1	protein_coding	35909483,35910157	35909564,35911686	Gene ID= ENSG00000235387.2 TPM= 1.17 Transcript Type= protein_coding
chr9	35910076	35911613	35910076	35911613	+	ENST00000636776.1@SPAAR	ENST00000636776.1	protein_coding	35910076	35911613	Gene ID= ENSG00000235387.2 TPM= 5.84 Transcript Type= protein_coding
chr9	36036433	36124451	36036433	36124451	+	ENST00000377966.3@RECK	ENST00000377966.3	protein_coding	36036433,36052265,36058827,36060119,36063795,36065577,36080605,36083365,36087694,36091164,36100331,36102094,36105143,36107976,36109957,36112305,36116985,36118757,36120663,36121533,36122824	36037098,36052323,36058901,36060155,36063880,36065624,36080638,36083562,36087961,36091343,36100543,36102230,36105283,36108164,36110079,36112476,36117177,36118967,36120736,36121688,36124451	Gene ID= ENSG00000122707.11 TPM= 46.9 Transcript Type= protein_coding
chr9	36036899	36124451	36036899	36124451	+	transcript1067.chr9.nnic@RECK	transcript1067.chr9.nnic	protein_coding	36036899,36052265,36058827,36060119,36063795,36065577,36080605,36083365,36087694,36091164,36100331,36102094,36105143,36108048,36109957,36112305,36116985,36118757,36120663,36121533,36122824	36037098,36052323,36058901,36060155,36063880,36065624,36080638,36083562,36087961,36091343,36100543,36102230,36105283,36108164,36110079,36112476,36117177,36118967,36120736,36121688,36124451	Gene ID= ENSG00000122707.11 TPM= 3.7 Transcript Type= NA
chr9	36036899	36124451	36036899	36124451	+	transcript1069.chr9.nnic@RECK	transcript1069.chr9.nnic	protein_coding	36036899,36052265,36058827,36060119,36063795,36065577,36080605,36083365,36087694,36091164,36102094,36105143,36107976,36109957,36112305,36116985,36118757,36120663,36121533,36122824	36037098,36052323,36058901,36060155,36063880,36065624,36080638,36083562,36087961,36091343,36102230,36105283,36108164,36110079,36112476,36117177,36118967,36120736,36121688,36124451	Gene ID= ENSG00000122707.11 TPM= 3.12 Transcript Type= NA
chr9	36036899	36086181	36036899	36086181	+	transcript1074.chr9.nic@RECK	transcript1074.chr9.nic	protein_coding	36036899,36052265,36058827,36060119,36063795,36065577,36080605,36083365,36085902	36037098,36052323,36058901,36060155,36063880,36065624,36080638,36083562,36086181	Gene ID= ENSG00000122707.11 TPM= 2.34 Transcript Type= NA
chr9	36036940	36086195	36036940	36086195	+	ENST00000479053.1@RECK	ENST00000479053.1	protein_coding	36036940,36052265,36058827,36060119,36063795,36065577,36080605,36083365,36085175	36037098,36052323,36058901,36060155,36063880,36065624,36080638,36083562,36086195	Gene ID= ENSG00000122707.11 TPM= 1.17 Transcript Type= processed_transcript
chr9	36136430	36152981	36136430	36152981	+	transcript1083.chr9.nic@GLIPR2	transcript1083.chr9.nic	protein_coding	36136430,36147786,36148547,36150872	36136791,36147894,36148650,36152981	Gene ID= ENSG00000122694.15 TPM= 3.5 Transcript Type= NA
chr9	36136737	36162587	36136737	36162587	+	transcript1086.chr9.nnic@GLIPR2	transcript1086.chr9.nnic	protein_coding	36136737,36162362	36136791,36162587	Gene ID= ENSG00000122694.15 TPM= 3.5 Transcript Type= NA
chr9	36136745	36163913	36136745	36163913	+	ENST00000377960.8@GLIPR2	ENST00000377960.8	protein_coding	36136745,36147786,36148547,36150872,36162362	36136791,36147894,36148650,36150949,36163913	Gene ID= ENSG00000122694.15 TPM= 89.9 Transcript Type= protein_coding
chr9	36190856	36212061	36190856	36212061	+	ENST00000538225.5@CLTA	ENST00000538225.5	protein_coding	36190856,36197551,36198979,36204068,36210625,36211604	36191273,36197588,36199096,36204179,36210661,36212061	Gene ID= ENSG00000122705.16 TPM= 5.55 Transcript Type= protein_coding
chr9	36190856	36212061	36190856	36212061	+	ENST00000540080.5@CLTA	ENST00000540080.5	protein_coding	36190856,36204068,36211603	36191273,36204179,36212061	Gene ID= ENSG00000122705.16 TPM= 6.71 Transcript Type= protein_coding
chr9	36190923	36212056	36190923	36212056	+	ENST00000345519.9@CLTA	ENST00000345519.9	protein_coding	36190923,36197551,36198979,36204068,36211603	36191273,36197588,36199096,36204179,36212056	Gene ID= ENSG00000122705.16 TPM= 243.74 Transcript Type= protein_coding
chr9	36190932	36212058	36190932	36212058	+	ENST00000470744.5@CLTA	ENST00000470744.5	protein_coding	36190932,36197551,36198979,36204068,36210625,36211603	36191273,36197588,36199096,36204179,36210660,36212058	Gene ID= ENSG00000122705.16 TPM= 5.55 Transcript Type= protein_coding
chr9	36206856	36210780	36206856	36210780	-	transcript1094.chr9.nnic@NA	transcript1094.chr9.nnic	NA	36206856	36210780	Gene ID= novel_gene_chr9_1095 TPM= 3.5 Transcript Type= NA
chr9	36336404	36401198	36336404	36401198	-	ENST00000377885.6@RNF38	ENST00000377885.6	protein_coding	36401098,36390467,36375934,36369719,36357775,36356303,36353170,36352742,36351115,36344832,36342325,36336404	36401198,36390616,36376127,36369932,36357942,36356473,36353331,36352848,36351199,36344953,36342424,36339814	Gene ID= ENSG00000137075.17 TPM= 3.58 Transcript Type= protein_coding
chr9	36336404	36487652	36336404	36487652	-	transcript1102.chr9.nnic@RNF38	transcript1102.chr9.nnic	protein_coding	36487308,36424613,36375934,36369719,36357775,36356303,36353170,36352742,36351115,36344832,36342325,36336404	36487652,36424683,36376127,36369932,36357942,36356473,36353331,36352848,36351199,36344953,36342424,36339814	Gene ID= ENSG00000137075.17 TPM= 6.5 Transcript Type= NA
chr9	36336404	36400923	36336404	36400923	-	ENST00000350199.8@RNF38	ENST00000350199.8	protein_coding	36400554,36375934,36369719,36357775,36356303,36353170,36352742,36351115,36344832,36342325,36336404	36400923,36376127,36369932,36357942,36356473,36353331,36352848,36351199,36344953,36342424,36339814	Gene ID= ENSG00000137075.17 TPM= 13.51 Transcript Type= protein_coding
chr9	36336404	36401211	36336404	36401211	-	transcript1105.chr9.nic@RNF38	transcript1105.chr9.nic	protein_coding	36400936,36375934,36369719,36357775,36356303,36353170,36352742,36351115,36344832,36342325,36336404	36401211,36376127,36369932,36357942,36356473,36353331,36352848,36351199,36344953,36342424,36339814	Gene ID= ENSG00000137075.17 TPM= 7.67 Transcript Type= NA
chr9	36336404	36401251	36336404	36401251	-	transcript1106.chr9.nnic@RNF38	transcript1106.chr9.nnic	protein_coding	36401098,36375934,36369719,36357775,36356303,36353170,36352742,36351115,36344832,36342325,36336404	36401251,36376127,36369932,36357942,36356473,36353331,36352848,36351199,36344953,36342424,36339814	Gene ID= ENSG00000137075.17 TPM= 6.5 Transcript Type= NA
chr9	36336404	36400923	36336404	36400923	-	ENST00000357058.7@RNF38	ENST00000357058.7	protein_coding	36400554,36390467,36375934,36369719,36357775,36356303,36353170,36352742,36351115,36344832,36342325,36336404	36400923,36390616,36376127,36369932,36357942,36356473,36353331,36352848,36351199,36344953,36342424,36339814	Gene ID= ENSG00000137075.17 TPM= 7.09 Transcript Type= protein_coding
chr9	36336396	36400299	36336396	36400299	-	ENST00000353739.8@RNF38	ENST00000353739.8	protein_coding	36400097,36375934,36369719,36357775,36356303,36353170,36352742,36351115,36344832,36342325,36336396	36400299,36376127,36369932,36357942,36356473,36353331,36352848,36351199,36344953,36342424,36339814	Gene ID= ENSG00000137075.17 TPM= 5.34 Transcript Type= protein_coding
chr9	37079857	37090507	37079857	37090507	+	ENST00000625445.1@EBLN3P	ENST00000625445.1	lincRNA	37079857,37086668	37080536,37090507	Gene ID= ENSG00000281649.1 TPM= 11.68 Transcript Type= lincRNA
chr9	37120588	37358146	37120588	37358146	+	transcript1126.chr9.nnic@ZCCHC7	transcript1126.chr9.nnic	protein_coding	37120588,37126312,37302188,37304188,37305544,37327799,37349357,37354710,37356835	37120776,37126942,37302231,37304313,37305714,37327834,37349452,37354824,37358146	Gene ID= ENSG00000147905.17 TPM= 5.25 Transcript Type= NA
chr9	37120545	37358146	37120545	37358146	+	transcript1129.chr9.nnic@ZCCHC7	transcript1129.chr9.nnic	protein_coding	37120545,37302188,37304188,37305544,37327799,37349357,37354710,37356835	37120627,37302231,37304313,37305714,37327834,37349452,37354824,37358146	Gene ID= ENSG00000147905.17 TPM= 2.34 Transcript Type= NA
chr9	37120539	37358149	37120539	37358149	+	ENST00000336755.9@ZCCHC7	ENST00000336755.9	protein_coding	37120539,37126312,37302188,37304188,37305544,37327799,37349357,37354710,37356835	37120623,37126942,37302231,37304313,37305714,37327834,37349452,37354824,37358149	Gene ID= ENSG00000147905.17 TPM= 12.26 Transcript Type= protein_coding
chr9	37422666	37436990	37422666	37436990	+	ENST00000318158.10@GRHPR	ENST00000318158.10	protein_coding	37422666,37424845,37425922,37426538,37428484,37429732,37430511,37432008,37436661	37422833,37424975,37425994,37426654,37428572,37429836,37430646,37432138,37436990	Gene ID= ENSG00000137106.17 TPM= 67.72 Transcript Type= protein_coding
chr9	37485935	37503697	37485935	37503697	+	ENST00000377798.8@POLR1E	ENST00000377798.8	protein_coding	37485935,37486703,37487863,37489315,37492657,37493559,37495169,37495890,37498091,37500840,37501713,37503043	37486123,37486806,37487939,37489400,37492715,37493703,37495276,37495986,37498224,37500921,37501844,37503697	Gene ID= ENSG00000137054.15 TPM= 11.68 Transcript Type= protein_coding
chr9	37510892	37576253	37510892	37576253	-	ENST00000432825.6@FBXO10	ENST00000432825.6	protein_coding	37576211,37541184,37537110,37531909,37529124,37525102,37522825,37521569,37518125,37515904,37510892	37576253,37541774,37537943,37532058,37529260,37525172,37522977,37521838,37518438,37516085,37512721	Gene ID= ENSG00000147912.12 TPM= 8.17 Transcript Type= protein_coding
chr9	37588413	37592642	37588413	37592642	-	ENST00000321301.6@TOMM5	ENST00000321301.6	protein_coding	37592412,37588413	37592642,37588932	Gene ID= ENSG00000175768.12 TPM= 50.21 Transcript Type= protein_coding
chr9	37753784	37778022	37753784	37778022	+	transcript1149.chr9.nic@TRMT10B	transcript1149.chr9.nic	protein_coding	37753784,37761903,37762543,37763629,37768076,37769941,37770672,37776282,37777601	37753852,37762117,37762685,37763865,37768228,37770019,37770739,37776405,37778022	Gene ID= ENSG00000165275.9 TPM= 2.34 Transcript Type= NA
chr9	37753817	37778972	37753817	37778972	+	ENST00000297994.3@TRMT10B	ENST00000297994.3	protein_coding	37753817,37761903,37762577,37763629,37768076,37769941,37770672,37776282,37777601	37753852,37762117,37762685,37763753,37768228,37770019,37770739,37776405,37778972	Gene ID= ENSG00000165275.9 TPM= 5.84 Transcript Type= protein_coding
chr9	37800502	37863325	37800502	37863325	+	ENST00000377724.7@DCAF10	ENST00000377724.7	protein_coding	37800502,37819288,37842089,37854780,37857241,37860048,37861140	37801405,37819401,37842286,37854982,37857351,37860193,37863325	Gene ID= ENSG00000122741.15 TPM= 11.68 Transcript Type= protein_coding
chr9	37800767	37863325	37800767	37863325	+	transcript1171.chr9.nic@DCAF10	transcript1171.chr9.nic	protein_coding	37800767,37819288,37842089,37854780,37860048,37861140	37801405,37819401,37842286,37854982,37860193,37863325	Gene ID= ENSG00000122741.15 TPM= 9.34 Transcript Type= NA
chr9	37800767	37863325	37800767	37863325	+	transcript1175.chr9.nic@DCAF10	transcript1175.chr9.nic	protein_coding	37800767,37819288,37854780,37857241,37860048,37861140	37801405,37819401,37854982,37857351,37860193,37863325	Gene ID= ENSG00000122741.15 TPM= 18.68 Transcript Type= NA
chr9	37800785	37803369	37800785	37803369	+	transcript1200.chr9.nnic@NA	transcript1200.chr9.nnic	NA	37800785	37803369	Gene ID= novel_gene_chr9_1201 TPM= 3.5 Transcript Type= NA
chr9	37847865	37904353	37847865	37904353	-	transcript1187.chr9.nnic@SLC25A51	transcript1187.chr9.nnic	protein_coding	37904068,37899829,37881518,37847865	37904353,37899950,37881631,37848965	Gene ID= ENSG00000122696.13 TPM= 2.34 Transcript Type= NA
chr9	37879400	37904353	37879400	37904353	-	ENST00000496760.5@SLC25A51	ENST00000496760.5	protein_coding	37904068,37899829,37881518,37879400	37904353,37899950,37881631,37880748	Gene ID= ENSG00000122696.13 TPM= 4.67 Transcript Type= processed_transcript
chr9	37847865	37904353	37847865	37904353	-	transcript1192.chr9.nnic@SLC25A51	transcript1192.chr9.nnic	protein_coding	37904068,37899829,37847865	37904353,37899950,37848965	Gene ID= ENSG00000122696.13 TPM= 2.34 Transcript Type= NA
chr9	37883174	37885366	37883174	37885366	+	transcript1198.chr9.nnic@NA	transcript1198.chr9.nnic	NA	37883174	37885366	Gene ID= novel_gene_chr9_1199 TPM= 82.9 Transcript Type= NA
chr9	37915898	37919495	37915898	37919495	-	transcript1204.chr9.nnic@NA	transcript1204.chr9.nnic	NA	37915898	37919495	Gene ID= novel_gene_chr9_1205 TPM= 3.5 Transcript Type= NA
chr9	37919134	38069211	37919134	38069211	-	ENST00000377707.3@SHB	ENST00000377707.3	protein_coding	38067929,38016011,37974622,37955883,37948635,37919134	38069211,38016131,37974837,37956054,37948754,37920004	Gene ID= ENSG00000107338.9 TPM= 22.18 Transcript Type= protein_coding
chr9	37950265	37952275	37950265	37952275	-	transcript1202.chr9.nnic@NA	transcript1202.chr9.nnic	NA	37950265	37952275	Gene ID= novel_gene_chr9_1203 TPM= 2.34 Transcript Type= NA
chr9	38392664	38398661	38392664	38398661	+	ENST00000377698.3@ALDH1B1	ENST00000377698.3	protein_coding	38392664,38395740	38392807,38398661	Gene ID= ENSG00000137124.7 TPM= 49.04 Transcript Type= protein_coding
chr9	38620731	38623573	38620731	38623573	+	transcript1209.chr9.nnic@NA	transcript1209.chr9.nnic	NA	38620731	38623573	Gene ID= novel_gene_chr9_1210 TPM= 2.34 Transcript Type= NA
chr9	39807361	39810063	39807361	39810063	-	ENST00000625350.1@GLIDR	ENST00000625350.1	lincRNA	39809731,39807361	39810063,39809615	Gene ID= ENSG00000278175.3 TPM= 2.34 Transcript Type= lincRNA
chr9	39816599	39874562	39816599	39874562	-	ENST00000639056.1@BX664615.2	ENST00000639056.1	processed_transcript	39873910,39818821,39816599	39874562,39818924,39817729	Gene ID= ENSG00000283886.1 TPM= 1.17 Transcript Type= processed_transcript
chr9	40997089	41002956	40997089	41002956	-	transcript1244.chr9.nnic@NA	transcript1244.chr9.nnic	NA	40997089	41002956	Gene ID= novel_gene_chr9_1245 TPM= 8.17 Transcript Type= NA
chr9	41269916	41273997	41269916	41273997	-	ENST00000633881.1@AL845472.1	ENST00000633881.1	TEC	41269916	41273997	Gene ID= ENSG00000279561.2 TPM= 1.17 Transcript Type= TEC
chr9	41995045	42129552	41995045	42129552	-	transcript1255.chr9.nnic@CNTNAP3B	transcript1255.chr9.nnic	protein_coding	42129010,42104629,42076869,42013378,41998401,41997568,41996205,41995045	42129552,42104739,42077062,42013525,41998604,41997752,41996348,41996008	Gene ID= ENSG00000154529.14 TPM= 2.34 Transcript Type= NA
chr9	62376161	62435199	62376161	62435199	+	ENST00000377614.7@FGF7P6	ENST00000377614.7	transcribed_unprocessed_pseudogene	62376161,62432876,62434067	62376813,62432979,62435199	Gene ID= ENSG00000227449.8 TPM= 3.5 Transcript Type= processed_transcript
chr9	62801465	62813486	62801465	62813486	+	ENST00000424345.5@LINC01410	ENST00000424345.5	lincRNA	62801465,62803984,62809768,62811939,62812793	62801531,62804140,62811589,62812075,62813486	Gene ID= ENSG00000238113.6 TPM= 1.17 Transcript Type= lincRNA
chr9	63324834	63328126	63324834	63328126	+	transcript1264.chr9.nnic@NA	transcript1264.chr9.nnic	NA	63324834	63328126	Gene ID= novel_gene_chr9_1265 TPM= 5.84 Transcript Type= NA
chr9	63344995	63346328	63344995	63346328	-	transcript1266.chr9.nnic@NA	transcript1266.chr9.nnic	NA	63344995	63346328	Gene ID= novel_gene_chr9_1267 TPM= 2.34 Transcript Type= NA
chr9	63815602	63818889	63815602	63818889	+	transcript1270.chr9.nnic@NA	transcript1270.chr9.nnic	NA	63815602	63818889	Gene ID= novel_gene_chr9_1271 TPM= 3.5 Transcript Type= NA
chr9	65675928	65733992	65675928	65733992	+	transcript1279.chr9.nnic@CBWD5	transcript1279.chr9.nnic	protein_coding	65675928,65679166,65681574,65682766,65690967,65692571,65693386,65698515,65700251,65702970,65707009,65708902,65720041,65731630,65731802,65732993,65733510	65676130,65679252,65681670,65682857,65691026,65692608,65693473,65698561,65700337,65703014,65707152,65708958,65720092,65731698,65731867,65733122,65733992	Gene ID= ENSG00000147996.16 TPM= 2.34 Transcript Type= NA
chr9	65675799	65734041	65675799	65734041	+	ENST00000382405.7@CBWD5	ENST00000382405.7	protein_coding	65675799,65679166,65681574,65682766,65690967,65692571,65698515,65700251,65702970,65708902,65720041,65731630,65731802,65732993,65733510	65676130,65679252,65681670,65682857,65691026,65692608,65698561,65700337,65703014,65708958,65720092,65731698,65731867,65733122,65734041	Gene ID= ENSG00000147996.16 TPM= 40.87 Transcript Type= protein_coding
chr9	65675871	65733671	65675871	65733671	+	transcript1291.chr9.nic@CBWD5	transcript1291.chr9.nic	protein_coding	65675871,65679166,65681574,65682766,65690967,65692571,65698515,65702970,65708902,65720041,65731630,65731802,65732993,65733510	65676130,65679252,65681670,65682857,65691026,65692608,65698561,65703014,65708958,65720092,65731698,65731867,65733122,65733671	Gene ID= ENSG00000147996.16 TPM= 2.34 Transcript Type= NA
chr9	65675871	65704938	65675871	65704938	+	transcript1295.chr9.nic@CBWD5	transcript1295.chr9.nic	protein_coding	65675871,65679166,65681574,65682766,65690967,65692571,65693386,65698515,65700251,65702970	65676130,65679252,65681670,65682857,65691026,65692608,65693473,65698561,65700337,65704938	Gene ID= ENSG00000147996.16 TPM= 3.5 Transcript Type= NA
chr9	65675928	65685069	65675928	65685069	+	transcript1298.chr9.nic@CBWD5	transcript1298.chr9.nic	protein_coding	65675928,65679166,65681574,65682766	65676130,65679252,65681670,65685069	Gene ID= ENSG00000147996.16 TPM= 2.34 Transcript Type= NA
chr9	65675875	65682577	65675875	65682577	+	ENST00000377384.5@CBWD5	ENST00000377384.5	protein_coding	65675875,65679166,65681574	65676130,65679252,65682577	Gene ID= ENSG00000147996.16 TPM= 15.18 Transcript Type= protein_coding
chr9	65675924	65733674	65675924	65733674	+	ENST00000430059.6@CBWD5	ENST00000430059.6	protein_coding	65675924,65679166,65681574,65682766,65690967,65692571,65698515,65700251,65702970,65720041,65731630,65731802,65732993,65733510	65676130,65679252,65681670,65682857,65691026,65692608,65698561,65700337,65703014,65720092,65731698,65731867,65733122,65733674	Gene ID= ENSG00000147996.16 TPM= 4.67 Transcript Type= protein_coding
chr9	66267761	66269944	66267761	66269944	-	transcript1305.chr9.nnic@NA	transcript1305.chr9.nnic	NA	66267761	66269944	Gene ID= novel_gene_chr9_1306 TPM= 4.67 Transcript Type= NA
chr9	66900729	66921439	66900729	66921439	+	ENST00000621410.4@ZNF658	ENST00000621410.4	protein_coding	66900729,66903518,66908238,66908639,66917805	66900836,66903576,66908364,66908734,66921439	Gene ID= ENSG00000274349.4 TPM= 1.17 Transcript Type= protein_coding
chr9	68241942	68299963	68241942	68299963	+	transcript1314.chr9.nic@CBWD3	transcript1314.chr9.nic	protein_coding	68241942,68245213,68247613,68248806,68258532,68259347,68264468,68266220,68268934,68274882,68285989,68297580,68297752,68298964,68299481	68242185,68245299,68247709,68248897,68258569,68259434,68264514,68266306,68268978,68274938,68286040,68297648,68297817,68299093,68299963	Gene ID= ENSG00000196873.15 TPM= 2.34 Transcript Type= NA
chr9	68241926	68300015	68241926	68300015	+	ENST00000377342.9@CBWD3	ENST00000377342.9	protein_coding	68241926,68245213,68247613,68248806,68256921,68258532,68264468,68266220,68268934,68285989,68297580,68297752,68298964,68299481	68242185,68245299,68247709,68248897,68256980,68258569,68264514,68266306,68268978,68286040,68297648,68297817,68299093,68300015	Gene ID= ENSG00000196873.15 TPM= 4.67 Transcript Type= protein_coding
chr9	68705663	69009176	68705663	69009176	+	transcript1322.chr9.nic@PIP5K1B	transcript1322.chr9.nic	protein_coding	68705663,68818461,68822615,68863837,68876677,68888981,68894339,68917548,68919479,68919681,68923302,68934890,68940646,68991140,69008447	68705762,68818545,68822683,68863967,68876794,68889133,68894638,68917759,68919562,68919729,68923386,68935045,68940790,68991257,69009176	Gene ID= ENSG00000107242.17 TPM= 5.25 Transcript Type= NA
chr9	68705700	69009175	68705700	69009175	+	ENST00000265382.7@PIP5K1B	ENST00000265382.7	protein_coding	68705700,68742501,68818461,68822615,68863837,68876677,68888981,68894339,68917548,68919479,68919681,68923302,68934890,68940646,68991140,69008447	68705762,68742657,68818545,68822683,68863967,68876794,68889133,68894638,68917759,68919562,68919729,68923386,68935045,68940790,68991257,69009175	Gene ID= ENSG00000107242.17 TPM= 8.76 Transcript Type= protein_coding
chr9	68723697	68726448	68723697	68726448	-	transcript1348.chr9.nnic@NA	transcript1348.chr9.nnic	NA	68723697	68726448	Gene ID= novel_gene_chr9_1349 TPM= 5.84 Transcript Type= NA
chr9	68743209	68744955	68743209	68744955	-	transcript1350.chr9.nnic@NA	transcript1350.chr9.nnic	NA	68743209	68744955	Gene ID= novel_gene_chr9_1351 TPM= 2.34 Transcript Type= NA
chr9	68754177	68755565	68754177	68755565	-	transcript1346.chr9.nnic@NA	transcript1346.chr9.nnic	NA	68754177	68755565	Gene ID= novel_gene_chr9_1347 TPM= 5.84 Transcript Type= NA
chr9	68780059	68781414	68780059	68781414	+	transcript1334.chr9.nnic@NA	transcript1334.chr9.nnic	NA	68780059	68781414	Gene ID= novel_gene_chr9_1335 TPM= 8.17 Transcript Type= NA
chr9	68780059	68783600	68780059	68783600	+	transcript1338.chr9.nnic@NA	transcript1338.chr9.nnic	NA	68780059	68783600	Gene ID= novel_gene_chr9_1339 TPM= 4.67 Transcript Type= NA
chr9	69035259	69074213	69035259	69074213	+	ENST00000377270.7@FXN	ENST00000377270.7	protein_coding	69035259,69046385,69053140,69064938,69072612	69035947,69046482,69053260,69065035,69074213	Gene ID= ENSG00000165060.11 TPM= 2.34 Transcript Type= protein_coding
chr9	69174165	69255204	69174165	69255204	+	ENST00000377245.8@TJP2	ENST00000377245.8	protein_coding	69174165,69212548,69216339,69218257,69220887,69225304,69226022,69227765,69227981,69229184,69230082,69234439,69236028,69236949,69237878,69238710,69239937,69246690,69248012,69249375,69251035,69252815,69254209	69174432,69212601,69216463,69218359,69221496,69225407,69226175,69227873,69228114,69229250,69230232,69234547,69236238,69237136,69237973,69238789,69240147,69246790,69248224,69249485,69251364,69252900,69255204	Gene ID= ENSG00000119139.17 TPM= 61.88 Transcript Type= protein_coding
chr9	69174258	69255204	69174258	69255204	+	transcript1370.chr9.nic@TJP2	transcript1370.chr9.nic	protein_coding	69174258,69212548,69216339,69218257,69220887,69225304,69226022,69227765,69227981,69229184,69230082,69234439,69236028,69236949,69237878,69238710,69239937,69246690,69248012,69251035,69252815,69254209	69174432,69212601,69216463,69218359,69221496,69225407,69226175,69227873,69228114,69229250,69230232,69234547,69236238,69237136,69237973,69238789,69240147,69246790,69248224,69251364,69252900,69255204	Gene ID= ENSG00000119139.17 TPM= 11.68 Transcript Type= NA
chr9	69174277	69255204	69174277	69255204	+	ENST00000348208.8@TJP2	ENST00000348208.8	protein_coding	69174277,69212548,69216339,69218257,69220887,69225304,69226022,69227765,69227981,69229184,69230082,69234439,69236028,69236949,69237878,69238710,69239937,69246690,69248012,69252815,69254209	69174432,69212601,69216463,69218359,69221496,69225407,69226175,69227873,69228114,69229250,69230232,69234547,69236238,69237136,69237973,69238789,69240147,69246790,69248224,69252900,69255204	Gene ID= ENSG00000119139.17 TPM= 10.51 Transcript Type= protein_coding
chr9	69324793	69392600	69324793	69392600	+	transcript1385.chr9.nnic@FAM189A2	transcript1385.chr9.nnic	protein_coding	69324793,69336213,69371499,69375736,69377370,69377611,69383630,69383947,69385795,69388158,69391601	69325723,69336269,69371609,69375864,69377477,69377744,69383759,69384025,69385947,69388450,69392600	Gene ID= ENSG00000135063.17 TPM= 3.89 Transcript Type= NA
chr9	69325074	69392454	69325074	69392454	+	transcript1387.chr9.nnic@FAM189A2	transcript1387.chr9.nnic	protein_coding	69325074,69336213,69371499,69375736,69377370,69377611,69383630,69383947,69385795,69391601	69325723,69336269,69371609,69375864,69377477,69377744,69383759,69384025,69385947,69392454	Gene ID= ENSG00000135063.17 TPM= 6.22 Transcript Type= NA
chr9	69427530	69672306	69427530	69672306	-	ENST00000265381.6@APBA1	ENST00000265381.6	protein_coding	69672153,69516011,69476048,69471656,69467823,69458156,69457053,69456247,69452122,69449584,69440996,69432536,69427530	69672306,69517279,69476143,69471695,69467968,69458188,69457139,69456432,69452301,69449796,69441115,69432676,69431398	Gene ID= ENSG00000107282.7 TPM= 11.68 Transcript Type= protein_coding
chr9	70043848	70226970	70043848	70226970	+	transcript1405.chr9.nnic@MAMDC2	transcript1405.chr9.nnic	protein_coding	70043848,70044584,70108211,70109720,70112995,70126159,70131519,70140145,70143554,70168702,70170479,70185149,70218337,70225750,70225968	70044231,70044697,70108482,70109804,70113132,70126415,70131612,70140288,70143819,70168795,70170631,70185307,70218596,70225834,70226970	Gene ID= ENSG00000165072.9 TPM= 7.01 Transcript Type= NA
chr9	70126828	70128362	70126828	70128362	-	transcript1413.chr9.nnic@NA	transcript1413.chr9.nnic	NA	70126828	70128362	Gene ID= novel_gene_chr9_1414 TPM= 2.34 Transcript Type= NA
chr9	70258977	70354888	70258977	70354888	+	transcript1421.chr9.nnic@SMC5	transcript1421.chr9.nnic	protein_coding	70258977,70264304,70267923,70277310,70278491,70280759,70282422,70286200,70297966,70300046,70305247,70314742,70315446,70318514,70318794,70323483,70324021,70344144,70347066,70347613,70347919,70350114,70350376,70352191	70259263,70264445,70267975,70277472,70278625,70280899,70282583,70286271,70298221,70300200,70305360,70314836,70315578,70318687,70318963,70323606,70324143,70344269,70347161,70347717,70348038,70350293,70350471,70354888	Gene ID= ENSG00000198887.8 TPM= 10.51 Transcript Type= NA
chr9	70258983	70298066	70258983	70298066	+	transcript1429.chr9.nic@SMC5	transcript1429.chr9.nic	protein_coding	70258983,70264304,70267923,70277310,70278491,70280759,70282422,70297966	70259263,70264445,70267975,70277472,70278625,70280899,70286271,70298066	Gene ID= ENSG00000198887.8 TPM= 2.34 Transcript Type= NA
chr9	70258962	70354888	70258962	70354888	+	ENST00000361138.6@SMC5	ENST00000361138.6	protein_coding	70258962,70264304,70267923,70277310,70278491,70280759,70282422,70286200,70297966,70300046,70305247,70314742,70315446,70318514,70318794,70323483,70324021,70344144,70346605,70347066,70347613,70347919,70350114,70350376,70352191	70259263,70264445,70267975,70277472,70278625,70280899,70282583,70286271,70298221,70300200,70305360,70314836,70315578,70318687,70318963,70323606,70324143,70344269,70346649,70347161,70347717,70348038,70350293,70350471,70354888	Gene ID= ENSG00000198887.8 TPM= 9.34 Transcript Type= protein_coding
chr9	70334131	70336831	70334131	70336831	-	transcript1430.chr9.nnic@NA	transcript1430.chr9.nnic	NA	70334131	70336831	Gene ID= novel_gene_chr9_1431 TPM= 2.34 Transcript Type= NA
chr9	70384597	70414624	70384597	70414624	-	ENST00000377126.3@KLF9	ENST00000377126.3	protein_coding	70412859,70384597	70414624,70388005	Gene ID= ENSG00000119138.4 TPM= 32.69 Transcript Type= protein_coding
chr9	70404514	70406910	70404514	70406910	+	transcript1435.chr9.nnic@NA	transcript1435.chr9.nnic	NA	70404514	70406910	Gene ID= novel_gene_chr9_1436 TPM= 2.34 Transcript Type= NA
chr9	70606188	70608271	70606188	70608271	+	transcript1438.chr9.nnic@NA	transcript1438.chr9.nnic	NA	70606188	70608271	Gene ID= novel_gene_chr9_1439 TPM= 2.34 Transcript Type= NA
chr9	71675003	71678893	71675003	71678893	+	transcript1440.chr9.nnic@NA	transcript1440.chr9.nnic	NA	71675003	71678893	Gene ID= novel_gene_chr9_1441 TPM= 2.34 Transcript Type= NA
chr9	71683571	71769761	71683571	71769761	-	transcript1446.chr9.nnic@TMEM2	transcript1446.chr9.nnic	protein_coding	71769372,71750043,71746201,71745018,71740063,71734806,71732351,71730705,71730048,71729845,71725581,71722427,71717948,71716517,71714934,71712083,71709259,71704595,71700642,71697985,71694509,71690092,71685743,71683571	71769761,71750385,71746341,71745579,71740232,71734994,71732520,71730914,71730253,71729914,71725709,71722515,71718079,71716552,71715089,71712260,71709474,71704803,71700824,71698204,71694607,71690246,71685846,71685393	Gene ID= ENSG00000135048.13 TPM= 5.84 Transcript Type= NA
chr9	71683366	71768884	71683366	71768884	-	ENST00000377044.8@TMEM2	ENST00000377044.8	protein_coding	71768357,71750043,71746201,71745018,71740063,71734806,71732351,71730705,71730048,71729845,71725581,71722427,71717948,71716517,71714934,71712083,71709259,71704595,71700642,71697985,71694509,71690092,71685743,71683366	71768884,71750385,71746341,71745579,71740232,71734994,71732520,71730914,71730253,71729914,71725709,71722515,71718079,71716552,71715089,71712260,71709474,71704803,71700824,71698204,71694607,71690246,71685846,71685393	Gene ID= ENSG00000135048.13 TPM= 77.06 Transcript Type= protein_coding
chr9	71686742	71691428	71686742	71691428	+	transcript1452.chr9.nnic@NA	transcript1452.chr9.nnic	NA	71686742	71691428	Gene ID= novel_gene_chr9_1453 TPM= 8.17 Transcript Type= NA
chr9	72305430	72315464	72305430	72315464	+	ENST00000451596.2@LINC01504	ENST00000451596.2	lincRNA	72305430,72314990	72305625,72315464	Gene ID= ENSG00000225434.2 TPM= 3.5 Transcript Type= lincRNA
chr9	72354458	72365235	72354458	72365235	-	ENST00000376960.8@ZFAND5	ENST00000376960.8	protein_coding	72364696,72360628,72360110,72359418,72356931,72354458	72365235,72360787,72360221,72359521,72357056,72356101	Gene ID= ENSG00000107372.12 TPM= 98.08 Transcript Type= protein_coding
chr9	72354458	72365197	72354458	72365197	-	ENST00000376962.9@ZFAND5	ENST00000376962.9	protein_coding	72364696,72363470,72360628,72360110,72359418,72356931,72354458	72365197,72363606,72360787,72360221,72359521,72357056,72356101	Gene ID= ENSG00000107372.12 TPM= 103.92 Transcript Type= protein_coding
chr9	72900662	72953055	72900662	72953055	-	ENST00000297785.7@ALDH1A1	ENST00000297785.7	protein_coding	72952935,72940148,72930879,72928892,72927116,72925484,72924019,72918720,72916920,72911958,72909602,72905958,72900662	72953055,72940252,72931019,72929021,72927177,72925612,72924132,72918822,72917104,72912122,72909759,72906032,72901280	Gene ID= ENSG00000165092.12 TPM= 223.01 Transcript Type= protein_coding
chr9	73151864	73170393	73151864	73170393	+	transcript1479.chr9.nnic@ANXA1	transcript1479.chr9.nnic	protein_coding	73151864,73154461,73158522,73158695,73159329,73160263,73160803,73162782,73163476,73165116,73166097,73167497,73169032,73170051	73151924,73154581,73158601,73158803,73159423,73160376,73160893,73162861,73163532,73165209,73166192,73167555,73169154,73170393	Gene ID= ENSG00000135046.13 TPM= 22.18 Transcript Type= NA
chr9	73151757	73170393	73151757	73170393	+	ENST00000257497.10@ANXA1	ENST00000257497.10	protein_coding	73151757,73158522,73158695,73159329,73160263,73160803,73162782,73163476,73165116,73166097,73167497,73169032,73170051	73151924,73158601,73158803,73159423,73160376,73160893,73162861,73163532,73165209,73166192,73167555,73169154,73170393	Gene ID= ENSG00000135046.13 TPM= 468.21 Transcript Type= protein_coding
chr9	74946581	74952886	74946581	74952886	-	ENST00000376854.5@C9orf40	ENST00000376854.5	protein_coding	74952186,74946581	74952886,74948206	Gene ID= ENSG00000135045.6 TPM= 3.5 Transcript Type= protein_coding
chr9	74981020	75028394	74981020	75028394	-	ENST00000376834.7@CARNMT1	ENST00000376834.7	protein_coding	75028012,75017253,75016268,74999730,74998598,74996447,74984907,74981020	75028394,75017448,75016431,74999870,74998776,74996560,74985010,74983868	Gene ID= ENSG00000156017.12 TPM= 23.35 Transcript Type= protein_coding
chr9	75061200	75088263	75061200	75088263	-	transcript1506.chr9.nnic@NMRK1	transcript1506.chr9.nnic	protein_coding	75088008,75083087,75080815,75078326,75077490,75077159,75069895,75069742,75068996,75066757,75061200	75088263,75083150,75080941,75078582,75077580,75077207,75070042,75069813,75069102,75066840,75061567	Gene ID= ENSG00000106733.20 TPM= 2.34 Transcript Type= NA
chr9	75061200	75088296	75061200	75088296	-	transcript1508.chr9.nnic@NMRK1	transcript1508.chr9.nnic	protein_coding	75088008,75083087,75078705,75078326,75077490,75077159,75069895,75069742,75068996,75066757,75061200	75088296,75083150,75080941,75078611,75077580,75077207,75070042,75069813,75069102,75066840,75061567	Gene ID= ENSG00000106733.20 TPM= 5.84 Transcript Type= NA
chr9	75061200	75088225	75061200	75088225	-	transcript1525.chr9.nnic@NMRK1	transcript1525.chr9.nnic	protein_coding	75088008,75083087,75077159,75069895,75069742,75068996,75066757,75061200	75088225,75083150,75077207,75070042,75069813,75069102,75066840,75061567	Gene ID= ENSG00000106733.20 TPM= 3.5 Transcript Type= NA
chr9	75061200	75088209	75061200	75088209	-	transcript1531.chr9.nic@NMRK1	transcript1531.chr9.nic	protein_coding	75088008,75083087,75077490,75077159,75066757,75061200	75088209,75083150,75077580,75077207,75070042,75061567	Gene ID= ENSG00000106733.20 TPM= 3.5 Transcript Type= NA
chr9	75061200	75088209	75061200	75088209	-	ENST00000361092.8@NMRK1	ENST00000361092.8	protein_coding	75088008,75083087,75077490,75077159,75069895,75069742,75068996,75066757,75061200	75088209,75083150,75077580,75077207,75070042,75069813,75069102,75066840,75061567	Gene ID= ENSG00000106733.20 TPM= 16.35 Transcript Type= protein_coding
chr9	75890600	76193441	75890600	76193441	+	transcript1539.chr9.nnic@PCSK5	transcript1539.chr9.nnic	protein_coding	75890600,75932379,75986132,76023738,76026961,76067955,76071726,76095890,76107251,76157045,76158983,76169704,76174986,76179596,76181398,76184673,76188578,76189094,76189631,76193237	75891373,75932483,75986245,76023881,76027037,76068043,76071898,76096102,76107351,76157162,76159171,76169840,76175129,76179698,76181591,76184757,76188675,76189223,76189746,76193441	Gene ID= ENSG00000099139.13 TPM= 3.5 Transcript Type= NA
chr9	75890705	76195889	75890705	76195889	+	ENST00000376752.8@PCSK5	ENST00000376752.8	protein_coding	75890705,75932379,75986132,76023738,76026961,76067955,76071726,76095890,76107251,76134109,76157045,76158983,76169704,76174986,76179596,76181398,76184673,76188578,76189094,76189631,76193237	75891373,75932483,75986245,76023881,76027037,76068043,76071898,76096102,76107351,76134212,76157162,76159171,76169840,76175129,76179698,76181591,76184757,76188675,76189223,76189746,76195889	Gene ID= ENSG00000099139.13 TPM= 4.67 Transcript Type= protein_coding
chr9	75890644	76362339	75890644	76362339	+	ENST00000545128.5@PCSK5	ENST00000545128.5	protein_coding	75890644,75932379,75986132,76023738,76026961,76067955,76071726,76095890,76107251,76134109,76157045,76158983,76169704,76174986,76179596,76181398,76184673,76188578,76189094,76189631,76227503,76233460,76238959,76240616,76292233,76295275,76296665,76308645,76310656,76321422,76323052,76328009,76332433,76338230,76350828,76354033,76358513	75891373,75932483,75986245,76023881,76027037,76068043,76071898,76096102,76107351,76134212,76157162,76159171,76169840,76175129,76179698,76181591,76184757,76188675,76189223,76189746,76227605,76233596,76239165,76240684,76292275,76295411,76296865,76308728,76310851,76321639,76323288,76328239,76332610,76338447,76350928,76354219,76362339	Gene ID= ENSG00000099139.13 TPM= 1.17 Transcript Type= protein_coding
chr9	76385517	76394505	76385517	76394505	-	ENST00000376736.5@RFK	ENST00000376736.5	protein_coding	76394090,76392418,76388554,76385517	76394505,76392569,76388656,76387529	Gene ID= ENSG00000135002.11 TPM= 82.9 Transcript Type= protein_coding
chr9	76459152	76507414	76459152	76507414	+	ENST00000444201.6@GCNT1	ENST00000444201.6	protein_coding	76459152,76500916,76502239	76459305,76501061,76507414	Gene ID= ENSG00000187210.12 TPM= 2.34 Transcript Type= protein_coding
chr9	76611379	76703425	76611379	76703425	-	transcript1559.chr9.nic@PRUNE2	transcript1559.chr9.nic	protein_coding	76703337,76655423,76652483,76644739,76641972,76638186,76637418,76636471,76629192,76611379	76703425,76655502,76652683,76644912,76641980,76638288,76637549,76636557,76629290,76614600	Gene ID= ENSG00000106772.17 TPM= 3.5 Transcript Type= NA
chr9	76611481	76906041	76611481	76906041	-	ENST00000443509.6@PRUNE2	ENST00000443509.6	protein_coding	76905928,76854104,76850463,76846515,76826580,76823632,76713563,76704761,76703337,76655423,76652483,76644739,76641972,76638186,76637418,76636471,76629192,76611481	76906041,76854208,76850665,76846678,76826732,76823726,76713721,76711358,76704099,76655502,76652683,76644909,76641980,76638288,76637549,76636557,76629290,76614600	Gene ID= ENSG00000106772.17 TPM= 2.34 Transcript Type= protein_coding
chr9	77423079	77648307	77423079	77648307	-	ENST00000341700.6@GNA14	ENST00000341700.6	protein_coding	77647670,77529069,77434368,77431321,77428907,77425562,77423079	77648307,77529253,77434522,77431449,77429036,77425715,77424169	Gene ID= ENSG00000156049.6 TPM= 12.84 Transcript Type= protein_coding
chr9	77716274	77718314	77716274	77718314	-	transcript1587.chr9.nnic@NA	transcript1587.chr9.nnic	NA	77716274	77718314	Gene ID= novel_gene_chr9_1588 TPM= 2.34 Transcript Type= NA
chr9	77717325	77719539	77717325	77719539	-	transcript1585.chr9.nnic@NA	transcript1585.chr9.nnic	NA	77717325	77719539	Gene ID= novel_gene_chr9_1586 TPM= 5.84 Transcript Type= NA
chr9	78024668	78027766	78024668	78027766	+	transcript1583.chr9.nnic@NA	transcript1583.chr9.nnic	NA	78024668	78027766	Gene ID= novel_gene_chr9_1584 TPM= 15.18 Transcript Type= NA
chr9	78236087	78267067	78236087	78267067	+	transcript1594.chr9.nic@CEP78	transcript1594.chr9.nic	protein_coding	78236087,78240023,78240292,78241696,78243462,78246669,78248291,78248762,78251908,78253232,78254836,78262907,78264150,78265372,78265859,78266442	78236659,78240195,78240364,78241799,78243636,78246782,78248355,78248873,78252043,78253277,78254964,78262984,78264316,78265543,78265906,78267067	Gene ID= ENSG00000148019.12 TPM= 2.34 Transcript Type= NA
chr9	78297143	78330093	78297143	78330093	+	ENST00000376588.3@PSAT1	ENST00000376588.3	protein_coding	78297143,78300602,78301954,78304735,78306314,78308414,78317676,78328051,78328981	78297270,78300662,78302023,78304940,78306486,78308583,78317804,78328188,78330093	Gene ID= ENSG00000135069.13 TPM= 7.01 Transcript Type= protein_coding
chr9	79571773	79725499	79571773	79725499	+	ENST00000376552.6@TLE4	ENST00000376552.6	protein_coding	79571773,79573689,79574873,79576133,79612656,79627374,79652593,79654059,79704783,79705889,79706747,79708118,79708593,79709623,79718722,79720046,79721741,79722451,79722959,79725037	79572835,79573786,79574936,79576177,79612718,79627448,79652794,79654075,79704902,79705942,79706899,79708250,79708786,79709699,79718971,79720293,79721888,79722601,79723035,79725499	Gene ID= ENSG00000106829.18 TPM= 4.67 Transcript Type= protein_coding
chr9	79571946	79574234	79571946	79574234	+	transcript1608.chr9.nnic@NA	transcript1608.chr9.nnic	NA	79571946	79574234	Gene ID= novel_gene_chr9_1609 TPM= 2.34 Transcript Type= NA
chr9	81583683	81689126	81583683	81689126	-	transcript1611.chr9.nnic@TLE1	transcript1611.chr9.nnic	protein_coding	81688217,81687334,81685833,81685676,81653974,81652214,81634097,81633348,81620441,81616646,81615982,81613377,81612292,81611769,81610220,81593025,81590805,81587681,81585505,81584448,81583683	81689126,81687434,81685896,81685720,81654036,81652288,81634301,81633364,81620557,81616699,81616134,81613521,81612393,81611959,81610296,81593274,81591052,81587828,81585655,81584524,81584305	Gene ID= ENSG00000196781.14 TPM= 4.67 Transcript Type= NA
chr9	81583683	81689513	81583683	81689513	-	transcript1615.chr9.nic@TLE1	transcript1615.chr9.nic	protein_coding	81688217,81687334,81685833,81685676,81653974,81652214,81634097,81633348,81620441,81616646,81615982,81613422,81611769,81610220,81593025,81590805,81587681,81585505,81584448,81583683	81689513,81687434,81685896,81685720,81654036,81652288,81634301,81633364,81620557,81616699,81616134,81613521,81611959,81610296,81593274,81591052,81587828,81585655,81584524,81584305	Gene ID= ENSG00000196781.14 TPM= 5.84 Transcript Type= NA
chr9	81583683	81689546	81583683	81689546	-	transcript1617.chr9.nnic@TLE1	transcript1617.chr9.nnic	protein_coding	81688217,81687334,81685833,81685676,81634097,81633348,81620441,81616646,81615982,81613377,81611769,81610220,81593025,81590805,81587681,81585505,81584448,81583683	81689546,81687434,81685896,81685720,81634301,81633364,81620557,81616699,81616134,81613521,81611959,81610296,81593274,81591052,81587828,81585655,81584524,81584305	Gene ID= ENSG00000196781.14 TPM= 8.17 Transcript Type= NA
chr9	81632476	81689523	81632476	81689523	-	transcript1624.chr9.nic@TLE1	transcript1624.chr9.nic	protein_coding	81688217,81687334,81685833,81685676,81653974,81652184,81632476	81689523,81687434,81685896,81685720,81654036,81652288,81634301	Gene ID= ENSG00000196781.14 TPM= 3.12 Transcript Type= NA
chr9	82979585	83063128	82979585	83063128	-	ENST00000376447.3@RASEF	ENST00000376447.3	protein_coding	83062437,83025775,83022336,83015805,83012434,83009641,83007437,83005416,83004498,83000896,83000433,83000169,82998365,82997012,82992906,82990391,82979585	83063128,83025921,83022426,83015900,83012511,83009756,83007505,83005500,83004586,83001130,83000570,83000316,82998446,82997126,82993025,82990467,82982782	Gene ID= ENSG00000165105.9 TPM= 4.67 Transcript Type= protein_coding
chr9	83244622	83538438	83244622	83538438	-	ENST00000304195.7@FRMD3	ENST00000304195.7	protein_coding	83538085,83389604,83372913,83349679,83343190,83335516,83313660,83311887,83310485,83309536,83299112,83298748,83290603,83244622	83538438,83389708,83372955,83349757,83343287,83335639,83313747,83311975,83310548,83309624,83299186,83298816,83290727,83248516	Gene ID= ENSG00000172159.15 TPM= 5.84 Transcript Type= protein_coding
chr9	83659963	83708203	83659963	83708203	-	ENST00000376395.8@UBQLN1	ENST00000376395.8	protein_coding	83707500,83686004,83682951,83679775,83678441,83677727,83669185,83666350,83665030,83663875,83659963	83708203,83686155,83683066,83680037,83678599,83677961,83669327,83666433,83665145,83664043,83661939	Gene ID= ENSG00000135018.13 TPM= 15.76 Transcript Type= protein_coding
chr9	83661429	83707934	83661429	83707934	-	ENST00000257468.11@UBQLN1	ENST00000257468.11	protein_coding	83707500,83686004,83682951,83679775,83678441,83677727,83669185,83665030,83663875,83661429	83707934,83686155,83683066,83680037,83678599,83677961,83669327,83665145,83664043,83661939	Gene ID= ENSG00000135018.13 TPM= 6.42 Transcript Type= protein_coding
chr9	83739421	83817742	83739421	83817742	-	ENST00000376371.6@GKAP1	ENST00000376371.6	protein_coding	83817517,83816996,83806302,83799185,83788601,83784715,83780382,83768818,83753258,83748309,83742530,83741952,83739421	83817742,83817127,83806560,83799328,83788678,83784838,83780404,83768970,83753359,83748372,83742600,83742029,83739744	Gene ID= ENSG00000165113.12 TPM= 3.5 Transcript Type= protein_coding
chr9	83834100	83835800	83834100	83835800	-	transcript1654.chr9.nnic@NA	transcript1654.chr9.nnic	NA	83834100	83835800	Gene ID= novel_gene_chr9_1655 TPM= 2.34 Transcript Type= NA
chr9	83938311	83956717	83938311	83956717	-	ENST00000376344.7@C9orf64	ENST00000376344.7	protein_coding	83956164,83955381,83944794,83938311	83956717,83955640,83944989,83939743	Gene ID= ENSG00000165118.14 TPM= 21.02 Transcript Type= protein_coding
chr9	83968083	83980645	83968083	83980645	-	transcript1665.chr9.nic@HNRNPK	transcript1665.chr9.nic	protein_coding	83980503,83978373,83978195,83977689,83976995,83975462,83974517,83973902,83973286,83972844,83971882,83971672,83971273,83970897,83970737,83970162,83968083	83980645,83978452,83978279,83977786,83977051,83975505,83974589,83973973,83973399,83972972,83972189,83971726,83971356,83970912,83970819,83970331,83969380	Gene ID= ENSG00000165119.20 TPM= 12.2 Transcript Type= NA
chr9	83968084	83980269	83968084	83980269	-	ENST00000376263.7@HNRNPK	ENST00000376263.7	protein_coding	83980153,83978373,83978195,83977689,83976995,83975462,83974517,83973902,83973286,83972844,83971882,83971672,83971273,83970897,83970737,83970162,83968084	83980269,83978452,83978279,83977786,83977051,83975505,83974589,83973973,83973399,83972972,83972189,83971726,83971356,83970912,83970819,83970331,83969440	Gene ID= ENSG00000165119.20 TPM= 3.85 Transcript Type= protein_coding
chr9	83968083	83980604	83968083	83980604	-	ENST00000376281.8@HNRNPK	ENST00000376281.8	protein_coding	83980503,83978373,83978195,83977689,83976995,83975462,83974517,83973902,83973286,83972844,83971882,83971672,83971273,83970897,83970737,83970162,83968083	83980604,83978452,83978279,83977786,83977051,83975505,83974589,83973973,83973399,83972972,83972189,83971726,83971356,83970912,83970819,83970331,83969440	Gene ID= ENSG00000165119.20 TPM= 9.77 Transcript Type= protein_coding
chr9	83968909	83980250	83968909	83980250	-	ENST00000360384.9@HNRNPK	ENST00000360384.9	protein_coding	83980153,83978373,83978195,83977689,83976995,83975462,83974517,83973902,83973286,83972844,83971882,83971672,83971273,83970897,83970737,83970162,83968909	83980250,83978452,83978279,83977786,83977051,83975505,83974589,83973973,83973399,83972972,83972189,83971726,83971356,83970912,83970819,83970331,83969380	Gene ID= ENSG00000165119.20 TPM= 103.51 Transcript Type= protein_coding
chr9	83975287	83978349	83975287	83978349	+	transcript1708.chr9.nnic@NA	transcript1708.chr9.nnic	NA	83975287	83978349	Gene ID= novel_gene_chr9_1709 TPM= 18.68 Transcript Type= NA
chr9	83980798	84004074	83980798	84004074	+	ENST00000325875.7@RMI1	ENST00000325875.7	protein_coding	83980798,83999709,84000951	83981004,83999797,84004074	Gene ID= ENSG00000178966.16 TPM= 2.34 Transcript Type= protein_coding
chr9	85542738	85545558	85542738	85545558	-	transcript1734.chr9.nnic@NA	transcript1734.chr9.nnic	NA	85542738	85545558	Gene ID= novel_gene_chr9_1735 TPM= 3.5 Transcript Type= NA
chr9	85546539	85741917	85546539	85741917	-	transcript1717.chr9.nnic@AGTPBP1	transcript1717.chr9.nnic	protein_coding	85741273,85712502,85692689,85681268,85678335,85677436,85672550,85669485,85660936,85657435,85655143,85646321,85642827,85632662,85621202,85619215,85618983,85596362,85592560,85589528,85588298,85586831,85585463,85578920,85575315,85546539	85741917,85712566,85692813,85681335,85678398,85677582,85672681,85669578,85660973,85657643,85655320,85646418,85642943,85633374,85621285,85619301,85619131,85596449,85592704,85589681,85588478,85586960,85585594,85579096,85575475,85547286	Gene ID= ENSG00000135049.15 TPM= 4.52 Transcript Type= NA
chr9	85546540	85742029	85546540	85742029	-	ENST00000337006.8@AGTPBP1	ENST00000337006.8	protein_coding	85741775,85692689,85681268,85678335,85677436,85672550,85669485,85660936,85657435,85655143,85646321,85642827,85632662,85621202,85619215,85618983,85596362,85592560,85589528,85588298,85586831,85585463,85578920,85575315,85546540	85742029,85692813,85681335,85678398,85677582,85672681,85669578,85660973,85657643,85655320,85646418,85642943,85633374,85621285,85619301,85619131,85596449,85592704,85589681,85588478,85586960,85585594,85579096,85575475,85547286	Gene ID= ENSG00000135049.15 TPM= 3.35 Transcript Type= protein_coding
chr9	85575103	85741983	85575103	85741983	-	transcript1726.chr9.nic@AGTPBP1	transcript1726.chr9.nic	protein_coding	85741775,85712502,85692689,85681268,85678335,85677436,85672550,85669485,85660936,85657435,85655143,85646321,85642827,85632662,85621202,85619215,85618983,85596362,85592560,85589528,85588298,85586831,85585463,85578920,85575103	85741983,85712566,85692813,85681335,85678398,85677582,85672681,85669578,85660973,85657643,85655320,85646418,85642943,85633374,85621285,85619301,85619131,85596449,85592704,85589681,85588478,85586960,85585594,85579096,85575475	Gene ID= ENSG00000135049.15 TPM= 7.24 Transcript Type= NA
chr9	85546542	85741886	85546542	85741886	-	ENST00000357081.7@AGTPBP1	ENST00000357081.7	protein_coding	85741775,85712502,85692689,85681268,85678335,85677436,85672550,85669485,85660936,85657435,85655143,85646321,85642827,85632662,85621202,85619215,85618983,85596362,85592560,85589528,85588298,85586831,85585463,85578920,85575315,85546542	85741886,85712566,85692813,85681335,85678398,85677582,85672681,85669578,85660973,85657643,85655320,85646418,85642943,85633374,85621285,85619301,85619131,85596449,85592704,85589681,85588478,85586960,85585594,85579096,85575475,85547286	Gene ID= ENSG00000135049.15 TPM= 17.36 Transcript Type= protein_coding
chr9	85546539	85741818	85546539	85741818	-	ENST00000376083.7@AGTPBP1	ENST00000376083.7	protein_coding	85741775,85712502,85692689,85681268,85678335,85677436,85672550,85669485,85660936,85657435,85655143,85646321,85642827,85632662,85621202,85619215,85618983,85596362,85592560,85589528,85588298,85586831,85585463,85578920,85575315,85546539	85741818,85712566,85692813,85681335,85678398,85677582,85672681,85669578,85660973,85657643,85655200,85646418,85642943,85633374,85621285,85619301,85619131,85596449,85592704,85589681,85588478,85586960,85585594,85579096,85575475,85547286	Gene ID= ENSG00000135049.15 TPM= 2.57 Transcript Type= protein_coding
chr9	85805340	85849722	85805340	85849722	+	transcript1739.chr9.nnic@AL353743.1	transcript1739.chr9.nnic	transcribed_unprocessed_pseudogene	85805340,85806002,85815879,85822880,85829463,85830324,85837759,85840077,85840750,85842724,85845842,85849346	85805598,85806133,85816263,85823080,85829606,85830576,85837965,85840262,85840849,85842879,85846047,85849722	Gene ID= ENSG00000165121.11 TPM= 2.34 Transcript Type= NA
chr9	85941218	86022298	85941218	86022298	+	transcript1746.chr9.nic@NAA35	transcript1746.chr9.nic	protein_coding	85941218,85942155,85956360,85958472,85959793,85962013,85974967,85975114,85976685,85977363,85978267,85996399,86003585,86007358,86009865,86013046,86013719,86016539,86017498,86018255,86018699,86020889,86021901	85941874,85942283,85956393,85958586,85959867,85962180,85975033,85975157,85976735,85977446,85978381,85996577,86003644,86007464,86009931,86013144,86013897,86016675,86017565,86018395,86018821,86020969,86022298	Gene ID= ENSG00000135040.15 TPM= 2.34 Transcript Type= NA
chr9	85941146	86022298	85941146	86022298	+	ENST00000361671.9@NAA35	ENST00000361671.9	protein_coding	85941146,85942155,85956360,85958472,85959793,85962013,85974967,85975114,85976685,85977363,85978267,85996399,86003585,86007358,86009865,86013046,86013719,86016539,86017498,86018255,86018699,86020889,86021901	85941273,85942283,85956393,85958586,85959867,85962180,85975033,85975157,85976735,85977446,85978381,85996577,86003644,86007464,86009931,86013144,86013897,86016675,86017565,86018395,86018821,86020969,86022298	Gene ID= ENSG00000135040.15 TPM= 7.01 Transcript Type= protein_coding
chr9	86026147	86100149	86026147	86100149	-	ENST00000388711.7@GOLM1	ENST00000388711.7	protein_coding	86100025,86079192,86077412,86052537,86046470,86040739,86036348,86035368,86033282,86026147	86100149,86079341,86077591,86052591,86046572,86040868,86036507,86035625,86033395,86027893	Gene ID= ENSG00000135052.16 TPM= 4.67 Transcript Type= protein_coding
chr9	86026146	86099558	86026146	86099558	-	ENST00000388712.7@GOLM1	ENST00000388712.7	protein_coding	86099411,86079192,86077412,86052537,86046470,86040739,86036348,86035368,86033282,86026146	86099558,86079341,86077591,86052591,86046572,86040868,86036507,86035625,86033395,86027893	Gene ID= ENSG00000135052.16 TPM= 56.04 Transcript Type= protein_coding
chr9	86264546	86282529	86264546	86282529	-	ENST00000375991.8@ISCA1	ENST00000375991.8	protein_coding	86282378,86274189,86272007,86264546	86282529,86274242,86272112,86266191	Gene ID= ENSG00000135070.14 TPM= 35.03 Transcript Type= protein_coding
chr9	86944363	86947189	86944363	86947189	-	ENST00000298743.8@GAS1	ENST00000298743.8	protein_coding	86944363	86947189	Gene ID= ENSG00000180447.6 TPM= 22.18 Transcript Type= protein_coding
chr9	87497681	87708630	87497681	87708630	+	ENST00000472284.5@DAPK1	ENST00000472284.5	protein_coding	87497681,87498970,87604954,87637943,87639354,87639650,87639789,87640298,87640802,87641969,87643376,87645895,87646461,87647305,87648781,87649921,87651527,87658029,87668597,87681404,87686551,87697007,87698656,87700117,87703029,87706132	87497772,87499139,87605175,87638081,87639483,87639698,87639815,87640450,87640847,87642058,87643468,87646014,87646559,87647403,87648879,87650118,87651724,87658127,87668674,87681626,87686739,87697204,87698794,87700237,87703217,87708630	Gene ID= ENSG00000196730.12 TPM= 59.16 Transcript Type= protein_coding
chr9	87497681	87708633	87497681	87708633	+	ENST00000469640.6@DAPK1	ENST00000469640.6	protein_coding	87497681,87498970,87604954,87637943,87639354,87639650,87639789,87640298,87640802,87641969,87643376,87645895,87646461,87647305,87648781,87649921,87651527,87658029,87668597,87681404,87686551,87698656,87700117,87703029,87706132	87498107,87499139,87605175,87638081,87639483,87639698,87639815,87640450,87640847,87642058,87643468,87646014,87646559,87647403,87648879,87650118,87651724,87658127,87668674,87681626,87686739,87698794,87700237,87703217,87708633	Gene ID= ENSG00000196730.12 TPM= 27.64 Transcript Type= protein_coding
chr9	87497881	87708628	87497881	87708628	+	ENST00000408954.7@DAPK1	ENST00000408954.7	protein_coding	87497881,87498970,87604954,87637943,87639354,87639650,87639789,87640298,87640802,87641969,87643376,87645895,87646461,87647305,87648781,87649921,87651527,87658029,87668597,87681404,87686551,87697007,87698656,87700117,87703029,87706132	87498107,87499139,87605175,87638081,87639483,87639698,87639815,87640450,87640847,87642058,87643468,87646014,87646559,87647403,87648879,87650118,87651724,87658127,87668674,87681626,87686739,87697204,87698794,87700237,87703217,87708628	Gene ID= ENSG00000196730.12 TPM= 47.49 Transcript Type= protein_coding
chr9	87497835	87507002	87497835	87507002	+	ENST00000495182.5@DAPK1	ENST00000495182.5	protein_coding	87497835,87498970,87506820	87498107,87499139,87507002	Gene ID= ENSG00000196730.12 TPM= 1.17 Transcript Type= processed_transcript
chr9	87639262	87642037	87639262	87642037	-	transcript1791.chr9.nnic@NA	transcript1791.chr9.nnic	NA	87639262	87642037	Gene ID= novel_gene_chr9_1792 TPM= 2.34 Transcript Type= NA
chr9	87725519	87731392	87725519	87731392	+	ENST00000343150.9@CTSL	ENST00000343150.9	protein_coding	87725519,87727594,87728027,87728250,87728585,87729573,87730381,87731008	87726398,87727729,87728149,87728396,87728809,87729735,87730498,87731392	Gene ID= ENSG00000135047.14 TPM= 66.75 Transcript Type= protein_coding
chr9	87726119	87731393	87726119	87731393	+	transcript1799.chr9.nic@CTSL	transcript1799.chr9.nic	protein_coding	87726119,87727594,87728027,87728250,87728585,87729573,87730381,87731008	87726308,87727729,87728149,87728396,87728809,87729735,87730498,87731393	Gene ID= ENSG00000135047.14 TPM= 13.63 Transcript Type= NA
chr9	87726109	87731386	87726109	87731386	+	ENST00000340342.10@CTSL	ENST00000340342.10	protein_coding	87726109,87727594,87728027,87728250,87728585,87729573,87730381,87731008	87726253,87727729,87728149,87728396,87728809,87729735,87730498,87731386	Gene ID= ENSG00000135047.14 TPM= 57.41 Transcript Type= protein_coding
chr9	87966634	87974752	87966634	87974752	-	ENST00000325303.8@CDK20	ENST00000325303.8	protein_coding	87974372,87973922,87971147,87970776,87970568,87969796,87969194,87966634	87974752,87974035,87971335,87970897,87970630,87969919,87969349,87967659	Gene ID= ENSG00000156345.17 TPM= 3.5 Transcript Type= protein_coding
chr9	87966450	87974487	87966450	87974487	-	ENST00000375871.8@CDK20	ENST00000375871.8	protein_coding	87974372,87973922,87971147,87970776,87969194,87966450	87974487,87974035,87971335,87970897,87969349,87967659	Gene ID= ENSG00000156345.17 TPM= 3.5 Transcript Type= protein_coding
chr9	88388329	88478694	88388329	88478694	+	transcript1811.chr9.nnic@SPIN1	transcript1811.chr9.nnic	protein_coding	88388329,88416644,88418778,88426382,88448941,88462496,88468372,88475078	88388538,88416766,88418951,88426591,88448989,88462749,88468605,88478694	Gene ID= ENSG00000106723.16 TPM= 2.5 Transcript Type= NA
chr9	88388411	88478694	88388411	88478694	+	transcript1813.chr9.nnic@SPIN1	transcript1813.chr9.nnic	protein_coding	88388411,88415607,88418778,88426382,88448941,88462496,88468372,88475078	88388538,88415699,88418951,88426591,88448989,88462749,88468605,88478694	Gene ID= ENSG00000106723.16 TPM= 2.5 Transcript Type= NA
chr9	88388411	88478694	88388411	88478694	+	transcript1814.chr9.nnic@SPIN1	transcript1814.chr9.nnic	protein_coding	88388411,88415607,88418850,88426382,88448941,88462496,88468372,88475078	88388538,88415699,88418951,88426591,88448989,88462749,88468605,88478694	Gene ID= ENSG00000106723.16 TPM= 4.83 Transcript Type= NA
chr9	88387885	88478694	88387885	88478694	+	transcript1815.chr9.nic@SPIN1	transcript1815.chr9.nic	protein_coding	88387885,88418850,88426382,88448941,88462496,88468372,88475078	88388538,88418951,88426591,88448989,88462749,88468605,88478694	Gene ID= ENSG00000106723.16 TPM= 7.17 Transcript Type= NA
chr9	88388411	88478694	88388411	88478694	+	transcript1816.chr9.nnic@SPIN1	transcript1816.chr9.nnic	protein_coding	88388411,88415607,88426382,88448941,88462496,88468372,88475078	88388538,88415699,88426591,88448989,88462749,88468605,88478694	Gene ID= ENSG00000106723.16 TPM= 4.83 Transcript Type= NA
chr9	88388424	88478694	88388424	88478694	+	transcript1817.chr9.nnic@SPIN1	transcript1817.chr9.nnic	protein_coding	88388424,88418778,88426382,88448941,88462496,88468372,88475078	88388538,88418951,88426591,88448989,88462749,88468605,88478694	Gene ID= ENSG00000106723.16 TPM= 2.5 Transcript Type= NA
chr9	88388419	88478694	88388419	88478694	+	ENST00000375859.3@SPIN1	ENST00000375859.3	protein_coding	88388419,88426382,88448941,88462496,88468372,88475078	88388538,88426591,88448989,88462749,88468605,88478694	Gene ID= ENSG00000106723.16 TPM= 64.38 Transcript Type= protein_coding
chr9	88445696	88449871	88445696	88449871	-	transcript1830.chr9.nnic@NA	transcript1830.chr9.nnic	NA	88445696	88449871	Gene ID= novel_gene_chr9_1831 TPM= 2.34 Transcript Type= NA
chr9	88991447	89005010	88991447	89005010	+	ENST00000358157.2@S1PR3	ENST00000358157.2	protein_coding	88991447,89001054	88991695,89005010	Gene ID= ENSG00000213694.3 TPM= 14.01 Transcript Type= protein_coding
chr9	89006584	89010469	89006584	89010469	-	transcript1848.chr9.nnic@NA	transcript1848.chr9.nnic	NA	89006584	89010469	Gene ID= novel_gene_chr9_1849 TPM= 2.34 Transcript Type= NA
chr9	89088604	89109298	89088604	89109298	-	ENST00000456944.1@AL353150.1	ENST00000456944.1	sense_intronic	89109048,89088604	89109298,89088935	Gene ID= ENSG00000224945.1 TPM= 1.17 Transcript Type= sense_intronic
chr9	89310023	89310816	89310023	89310816	-	transcript1854.chr9.nnic@NA	transcript1854.chr9.nnic	NA	89310023	89310816	Gene ID= novel_gene_chr9_1855 TPM= 2.34 Transcript Type= NA
chr9	89311198	89316703	89311198	89316703	+	ENST00000314355.6@CKS2	ENST00000314355.6	protein_coding	89311198,89315170,89316373	89311351,89315297,89316703	Gene ID= ENSG00000123975.4 TPM= 12.84 Transcript Type= protein_coding
chr9	89318474	89359642	89318474	89359642	+	transcript1862.chr9.nic@SECISBP2	transcript1862.chr9.nic	protein_coding	89318474,89319652,89325427,89325897,89328660,89332908,89334636,89338458,89339864,89341347,89346882,89348079,89349776,89350632,89357411,89357999,89358721	89318612,89319797,89325676,89326038,89328886,89332986,89334730,89338580,89339953,89341479,89347048,89348214,89349929,89350852,89357565,89358191,89359642	Gene ID= ENSG00000187742.14 TPM= 16.54 Transcript Type= NA
chr9	89318474	89359642	89318474	89359642	+	transcript1864.chr9.nic@SECISBP2	transcript1864.chr9.nic	protein_coding	89318474,89319652,89325548,89325897,89328660,89332908,89334636,89338458,89339864,89341347,89346882,89348079,89349776,89350632,89357411,89357999,89358721	89318612,89319797,89325676,89326038,89328886,89332986,89334730,89338580,89339953,89341479,89347048,89348214,89349929,89350852,89357565,89358191,89359642	Gene ID= ENSG00000187742.14 TPM= 3.7 Transcript Type= NA
chr9	89318474	89359642	89318474	89359642	+	transcript1866.chr9.nnic@SECISBP2	transcript1866.chr9.nnic	protein_coding	89318474,89319652,89325427,89325897,89328660,89332908,89334522,89338458,89341347,89346882,89348079,89349776,89350632,89357411,89357999,89358721	89318612,89319797,89325676,89326038,89328886,89332986,89334730,89338580,89341479,89347048,89348214,89349929,89350852,89357565,89358191,89359642	Gene ID= ENSG00000187742.14 TPM= 4.87 Transcript Type= NA
chr9	89318474	89359642	89318474	89359642	+	transcript1868.chr9.nnic@SECISBP2	transcript1868.chr9.nnic	protein_coding	89318474,89319652,89325897,89328660,89332908,89334636,89338458,89339864,89341347,89346882,89348079,89349776,89350632,89357411,89357999,89358721	89318612,89319797,89326038,89328886,89332986,89334730,89338580,89339953,89341479,89347048,89348214,89349929,89350852,89357565,89358191,89359642	Gene ID= ENSG00000187742.14 TPM= 3.7 Transcript Type= NA
chr9	89318474	89320380	89318474	89320380	+	transcript1879.chr9.nic@SECISBP2	transcript1879.chr9.nic	protein_coding	89318474,89319652	89318612,89320380	Gene ID= ENSG00000187742.14 TPM= 2.34 Transcript Type= NA
chr9	89318506	89359650	89318506	89359650	+	ENST00000375807.7@SECISBP2	ENST00000375807.7	protein_coding	89318506,89319652,89325427,89325897,89328660,89332908,89334522,89338458,89339864,89341347,89346882,89348079,89349776,89350632,89357411,89357999,89358721	89318612,89319797,89325676,89326038,89328886,89332986,89334730,89338580,89339953,89341479,89347048,89348214,89349929,89350852,89357565,89358191,89359650	Gene ID= ENSG00000187742.14 TPM= 21.8 Transcript Type= protein_coding
chr9	89318519	89359642	89318519	89359642	+	ENST00000339901.8@SECISBP2	ENST00000339901.8	protein_coding	89318519,89319652,89325548,89325897,89328660,89332908,89334522,89338458,89339864,89341347,89346882,89348079,89349776,89350632,89357411,89357999,89358721	89318612,89319797,89325676,89326038,89328886,89332986,89334730,89338580,89339953,89341479,89347048,89348214,89349929,89350852,89357565,89358191,89359642	Gene ID= ENSG00000187742.14 TPM= 5.45 Transcript Type= protein_coding
chr9	89357415	89359639	89357415	89359639	+	transcript1880.chr9.nnic@NA	transcript1880.chr9.nnic	NA	89357415	89359639	Gene ID= novel_gene_chr9_1881 TPM= 2.34 Transcript Type= NA
chr9	89361601	89377994	89361601	89377994	-	transcript1891.chr9.nnic@SEMA4D	transcript1891.chr9.nnic	protein_coding	89376833,89363741,89363430,89361601	89377994,89363950,89363530,89362428	Gene ID= ENSG00000187764.11 TPM= 4.67 Transcript Type= NA
chr9	89377391	89498089	89377391	89498089	-	ENST00000422704.6@SEMA4D	ENST00000422704.6	protein_coding	89497919,89455888,89405351,89402871,89399276,89396737,89393562,89392423,89391264,89388872,89388636,89387386,89386367,89381174,89381055,89377391	89498089,89455953,89405699,89403016,89399338,89396835,89393655,89392536,89391415,89389047,89388792,89387608,89386482,89381346,89381098,89379629	Gene ID= ENSG00000187764.11 TPM= 12.84 Transcript Type= protein_coding
chr9	89448698	89450685	89448698	89450685	+	transcript1895.chr9.nnic@NA	transcript1895.chr9.nnic	NA	89448698	89450685	Gene ID= novel_gene_chr9_1896 TPM= 11.68 Transcript Type= NA
chr9	89604990	89606555	89604990	89606555	+	transcript1899.chr9.nic@GADD45G	transcript1899.chr9.nic	protein_coding	89604990,89605432,89605758,89605969	89605174,89605533,89605880,89606555	Gene ID= ENSG00000130222.10 TPM= 4.67 Transcript Type= NA
chr9	89604990	89606555	89604990	89606555	+	transcript1900.chr9.nic@GADD45G	transcript1900.chr9.nic	protein_coding	89604990,89605432,89605969	89605174,89605880,89606555	Gene ID= ENSG00000130222.10 TPM= 5.84 Transcript Type= NA
chr9	89605012	89606555	89605012	89606555	+	transcript1901.chr9.nnic@GADD45G	transcript1901.chr9.nnic	protein_coding	89605012,89605667,89605969	89605174,89605880,89606555	Gene ID= ENSG00000130222.10 TPM= 7.01 Transcript Type= NA
chr9	89605010	89606555	89605010	89606555	+	transcript1902.chr9.nic@GADD45G	transcript1902.chr9.nic	protein_coding	89605010,89605969	89605880,89606555	Gene ID= ENSG00000130222.10 TPM= 5.84 Transcript Type= NA
chr9	89605013	89606555	89605013	89606555	+	ENST00000252506.10@GADD45G	ENST00000252506.10	protein_coding	89605013,89605432,89605667,89605969	89605174,89605533,89605880,89606555	Gene ID= ENSG00000130222.10 TPM= 50.21 Transcript Type= protein_coding
chr9	90801888	90898549	90801888	90898549	+	transcript1912.chr9.nic@SYK	transcript1912.chr9.nic	protein_coding	90801888,90843858,90845434,90862206,90864589,90865048,90867131,90874204,90874672,90877571,90878764,90887749,90888515,90895528	90802039,90844315,90845594,90862344,90864667,90865097,90867199,90874291,90874849,90877780,90878953,90887889,90888627,90898549	Gene ID= ENSG00000165025.14 TPM= 10.51 Transcript Type= NA
chr9	90801787	90898549	90801787	90898549	+	ENST00000375754.8@SYK	ENST00000375754.8	protein_coding	90801787,90843858,90845434,90862206,90864589,90865048,90867131,90874204,90874672,90877571,90878764,90887749,90888515,90895528	90801893,90844315,90845594,90862344,90864667,90865097,90867199,90874291,90874849,90877780,90878953,90887889,90888627,90898549	Gene ID= ENSG00000165025.14 TPM= 43.2 Transcript Type= protein_coding
chr9	90801800	90802825	90801800	90802825	+	transcript1924.chr9.nnic@NA	transcript1924.chr9.nnic	NA	90801800	90802825	Gene ID= novel_gene_chr9_1925 TPM= 3.5 Transcript Type= NA
chr9	91213818	91361972	91213818	91361972	-	transcript1932.chr9.nic@AUH	transcript1932.chr9.nic	protein_coding	91361628,91356088,91355883,91325318,91297984,91296021,91220805,91217277,91213818	91361972,91356155,91355970,91325404,91298076,91296077,91220992,91217327,91214425	Gene ID= ENSG00000148090.11 TPM= 3.5 Transcript Type= NA
chr9	91213815	91361913	91213815	91361913	-	ENST00000375731.8@AUH	ENST00000375731.8	protein_coding	91361628,91356088,91355883,91325318,91297984,91296021,91220805,91217277,91216059,91213815	91361913,91356155,91355970,91325404,91298076,91296077,91220992,91217327,91216106,91214425	Gene ID= ENSG00000148090.11 TPM= 4.67 Transcript Type= protein_coding
chr9	91288551	91291250	91288551	91291250	-	transcript1934.chr9.nnic@NA	transcript1934.chr9.nnic	NA	91288551	91291250	Gene ID= novel_gene_chr9_1935 TPM= 2.34 Transcript Type= NA
chr9	91409049	91424608	91409049	91424608	-	transcript1937.chr9.nnic@NFIL3	transcript1937.chr9.nnic	protein_coding	91424409,91409049	91424608,91410906	Gene ID= ENSG00000165030.3 TPM= 5.84 Transcript Type= NA
chr9	91409045	91423862	91409045	91423862	-	ENST00000297689.3@NFIL3	ENST00000297689.3	protein_coding	91423640,91409045	91423862,91410906	Gene ID= ENSG00000165030.3 TPM= 53.71 Transcript Type= protein_coding
chr9	91722597	91950162	91722597	91950162	-	ENST00000375708.3@ROR2	ENST00000375708.3	protein_coding	91949867,91775741,91757272,91756071,91737391,91733122,91730910,91726541,91722597	91950162,91775818,91757559,91756101,91737518,91733436,91731155,91726743,91725107	Gene ID= ENSG00000169071.14 TPM= 12.84 Transcript Type= protein_coding
chr9	92079061	92115383	92079061	92115383	-	ENST00000337841.4@SPTLC1	ENST00000337841.4	protein_coding	92115314,92112455,92108740,92080870,92080016,92079061	92115383,92112562,92108834,92080963,92080088,92079566	Gene ID= ENSG00000090054.13 TPM= 4.67 Transcript Type= protein_coding
chr9	92141298	92148306	92141298	92148306	+	ENST00000367276.8@LINC00475	ENST00000367276.8	lincRNA	92141298,92147922	92141650,92148306	Gene ID= ENSG00000225511.6 TPM= 8.17 Transcript Type= lincRNA
chr9	92141462	92144636	92141462	92144636	+	transcript1958.chr9.nnic@NA	transcript1958.chr9.nnic	NA	92141462	92144636	Gene ID= novel_gene_chr9_1959 TPM= 2.34 Transcript Type= NA
chr9	92210211	92293756	92210211	92293756	-	ENST00000627121.2@IARS	ENST00000627121.2	protein_coding	92293611,92289301,92288126,92287791,92286536,92285722,92280746,92278199,92277863,92274426,92271533,92270985,92269885,92268174,92265480,92264929,92262969,92260151,92258854,92256680,92253362,92251808,92250713,92250187,92249858,92247377,92244959,92243216,92242154,92240856,92240643,92229001,92223346,92222520,92210211	92293756,92289426,92288282,92287910,92286618,92285839,92280893,92278286,92277923,92274521,92271655,92271076,92269983,92268300,92265553,92265123,92263055,92260234,92258998,92256800,92253453,92251885,92250834,92250289,92249941,92247551,92245071,92243311,92242330,92240961,92240691,92229126,92223489,92222672,92210889	Gene ID= ENSG00000196305.17 TPM= 4.09 Transcript Type= protein_coding
chr9	92210207	92293700	92210207	92293700	-	ENST00000375643.7@IARS	ENST00000375643.7	protein_coding	92293441,92289301,92288126,92287791,92286536,92285722,92280746,92278199,92277863,92274426,92271533,92270985,92269885,92268174,92265480,92264929,92262969,92260151,92258854,92256680,92253362,92251808,92250713,92250187,92249858,92247377,92244959,92243216,92242154,92240856,92229001,92223346,92222520,92210207	92293700,92289426,92288282,92287910,92286618,92285839,92280893,92278286,92277923,92274521,92271655,92271076,92269983,92268300,92265553,92265123,92263055,92260234,92258998,92256800,92253453,92251885,92250834,92250289,92249941,92247551,92245071,92243311,92242330,92240961,92229126,92223489,92222672,92210889	Gene ID= ENSG00000196305.17 TPM= 3.5 Transcript Type= protein_coding
chr9	92210345	92293694	92210345	92293694	-	ENST00000443024.6@IARS	ENST00000443024.6	protein_coding	92293611,92289301,92288126,92287791,92286536,92285722,92280746,92278199,92277863,92274426,92271533,92270985,92269885,92268174,92265480,92264929,92262969,92260151,92258854,92256680,92253362,92251808,92250713,92250187,92249858,92247377,92244959,92243216,92242154,92240856,92229001,92223346,92222520,92210873,92210345	92293694,92289426,92288282,92287910,92286618,92285839,92280893,92278286,92277923,92274521,92271655,92271076,92269983,92268300,92265553,92265123,92263055,92260234,92258998,92256800,92253453,92251885,92250834,92250289,92249941,92247551,92245071,92243311,92242330,92240961,92229126,92223489,92222672,92210889,92210871	Gene ID= ENSG00000196305.17 TPM= 71.22 Transcript Type= protein_coding
chr9	92210345	92293695	92210345	92293695	-	ENST00000447699.6@IARS	ENST00000447699.6	protein_coding	92293611,92289301,92287791,92286536,92285722,92280746,92278199,92277863,92274426,92271533,92270985,92269885,92268174,92265480,92264929,92262969,92260151,92258854,92256680,92253362,92251808,92250713,92250187,92249858,92247377,92244959,92243216,92242154,92240856,92229001,92223346,92222520,92210345	92293695,92289426,92287910,92286618,92285839,92280893,92278286,92277923,92274521,92271655,92271076,92269983,92268300,92265553,92265123,92263055,92260234,92258998,92256800,92253453,92251885,92250834,92250289,92249941,92247551,92245071,92243311,92242330,92240961,92229126,92223489,92222672,92210889	Gene ID= ENSG00000196305.17 TPM= 21.02 Transcript Type= protein_coding
chr9	92297359	92325594	92297359	92325594	-	ENST00000358855.8@NOL8	ENST00000358855.8	protein_coding	92325318,92324023,92323441,92323236,92321668,92319221,92318618,92314267,92311146,92310553,92310171,92306886,92305753,92301551,92299890,92298884,92298257,92297359	92325594,92324209,92323503,92323351,92321746,92319356,92318686,92316138,92311259,92310675,92310261,92307024,92305830,92301822,92300016,92298954,92298336,92297886	Gene ID= ENSG00000198000.11 TPM= 1.17 Transcript Type= protein_coding
chr9	92297358	92325353	92297358	92325353	-	transcript1981.chr9.nic@NOL8	transcript1981.chr9.nic	protein_coding	92325180,92324023,92323441,92321668,92319221,92318618,92314267,92311146,92310553,92310171,92306886,92305753,92301551,92299890,92298884,92298257,92297358	92325353,92324209,92323503,92321746,92319356,92318686,92316138,92311259,92310675,92310261,92307024,92305830,92301822,92300016,92298954,92298336,92297886	Gene ID= ENSG00000198000.11 TPM= 4.09 Transcript Type= NA
chr9	92297358	92325556	92297358	92325556	-	ENST00000442668.6@NOL8	ENST00000442668.6	protein_coding	92325306,92324023,92323441,92321668,92319221,92318618,92314267,92311146,92310553,92310171,92306886,92305753,92301551,92299890,92298884,92298257,92297358	92325556,92324209,92323503,92321746,92319356,92318686,92316138,92311259,92310675,92310261,92307024,92305830,92301822,92300016,92298954,92298336,92297886	Gene ID= ENSG00000198000.11 TPM= 12.26 Transcript Type= protein_coding
chr9	92297484	92325630	92297484	92325630	-	transcript1991.chr9.nic@NOL8	transcript1991.chr9.nic	protein_coding	92324023,92323441,92321668,92319221,92318618,92314267,92311146,92310553,92310171,92306886,92305753,92301551,92299890,92298884,92298257,92297484	92325630,92323503,92321746,92319356,92318686,92316138,92311259,92310675,92310261,92307024,92305830,92301822,92300016,92298954,92298336,92297886	Gene ID= ENSG00000198000.11 TPM= 3.3 Transcript Type= NA
chr9	92301817	92325358	92301817	92325358	-	ENST00000432670.6@NOL8	ENST00000432670.6	protein_coding	92325180,92324023,92323441,92321668,92319221,92318618,92314267,92311146,92310553,92310171,92306886,92305753,92301817	92325358,92324209,92323503,92321746,92319356,92318686,92316138,92311259,92310675,92310261,92307024,92305830,92301822	Gene ID= ENSG00000198000.11 TPM= 1.17 Transcript Type= protein_coding
chr9	92297484	92325350	92297484	92325350	-	ENST00000536593.5@NOL8	ENST00000536593.5	protein_coding	92325318,92324023,92323441,92323236,92321668,92319221,92318618,92314267,92311146,92310553,92310171,92306886,92305753,92301551,92299890,92298884,92298257,92297484	92325350,92324209,92323503,92323351,92321746,92319356,92318686,92316138,92311259,92310675,92310261,92307024,92305830,92301822,92300016,92298954,92298336,92297886	Gene ID= ENSG00000198000.11 TPM= 1.55 Transcript Type= nonsense_mediated_decay
chr9	92383967	92404559	92383967	92404559	-	ENST00000262551.8@OGN	ENST00000262551.8	protein_coding	92404496,92403234,92401092,92393086,92389854,92386201,92383967	92404559,92403764,92401185,92393244,92390056,92386296,92385790	Gene ID= ENSG00000106809.10 TPM= 5.25 Transcript Type= protein_coding
chr9	92383967	92404613	92383967	92404613	-	ENST00000375561.9@OGN	ENST00000375561.9	protein_coding	92404496,92403234,92401092,92393086,92389854,92386201,92383967	92404613,92403482,92401185,92393244,92390056,92386296,92385790	Gene ID= ENSG00000106809.10 TPM= 2.92 Transcript Type= protein_coding
chr9	92414245	92424461	92414245	92424461	-	ENST00000375550.4@OMD	ENST00000375550.4	protein_coding	92424202,92416619,92414245	92424461,92417574,92415477	Gene ID= ENSG00000127083.7 TPM= 2.34 Transcript Type= protein_coding
chr9	92456205	92482506	92456205	92482506	-	ENST00000375544.7@ASPN	ENST00000375544.7	protein_coding	92482293,92474624,92470669,92466358,92464919,92460474,92459632,92456205	92482506,92474927,92470781,92466571,92465029,92460567,92459770,92457485	Gene ID= ENSG00000106819.11 TPM= 12.84 Transcript Type= protein_coding
chr9	92516712	92536055	92516712	92536055	-	ENST00000375540.5@ECM2	ENST00000375540.5	protein_coding	92535933,92522575,92516712	92536055,92522893,92517875	Gene ID= ENSG00000106823.12 TPM= 1.17 Transcript Type= protein_coding
chr9	92613184	92670265	92613184	92670265	-	ENST00000287996.7@IPPK	ENST00000287996.7	protein_coding	92669908,92658634,92656456,92652573,92649453,92648059,92642752,92640710,92638001,92635158,92634386,92619486,92613184	92670265,92658681,92656551,92652639,92649574,92648148,92642810,92640782,92638280,92635308,92634488,92619565,92616057	Gene ID= ENSG00000127080.9 TPM= 4.67 Transcript Type= protein_coding
chr9	92635705	92670159	92635705	92670159	-	transcript2020.chr9.nic@IPPK	transcript2020.chr9.nic	protein_coding	92669908,92658634,92656456,92652573,92649453,92648059,92642752,92640710,92635705	92670159,92658681,92656551,92652639,92649574,92648148,92642810,92640782,92638280	Gene ID= ENSG00000127080.9 TPM= 3.5 Transcript Type= NA
chr9	92647009	92650040	92647009	92650040	+	transcript2024.chr9.nnic@NA	transcript2024.chr9.nnic	NA	92647009	92650040	Gene ID= novel_gene_chr9_2025 TPM= 4.67 Transcript Type= NA
chr9	92711363	92764812	92711363	92764812	-	ENST00000375512.3@BICD2	ENST00000375512.3	protein_coding	92764505,92729024,92722656,92720300,92718539,92717797,92715253,92711363	92764812,92729236,92722808,92720755,92719582,92717948,92715463,92713461	Gene ID= ENSG00000185963.13 TPM= 93.99 Transcript Type= protein_coding
chr9	92711363	92764812	92711363	92764812	-	ENST00000356884.10@BICD2	ENST00000356884.10	protein_coding	92764505,92729024,92722656,92720300,92718539,92717797,92711363	92764812,92729236,92722808,92720755,92719582,92717948,92715463	Gene ID= ENSG00000185963.13 TPM= 27.44 Transcript Type= protein_coding
chr9	92839907	92842580	92839907	92842580	+	transcript2030.chr9.nnic@NA	transcript2030.chr9.nnic	NA	92839907	92842580	Gene ID= novel_gene_chr9_2031 TPM= 2.34 Transcript Type= NA
chr9	92846069	92878022	92846069	92878022	-	ENST00000332591.6@ZNF484	ENST00000332591.6	protein_coding	92877890,92856192,92855811,92846069	92878022,92856318,92855903,92848551	Gene ID= ENSG00000127081.13 TPM= 1.17 Transcript Type= protein_coding
chr9	92947451	93036236	92947451	93036236	+	ENST00000375482.7@FGD3	ENST00000375482.7	protein_coding	92947451,92975238,92976208,93002925,93004001,93006024,93010246,93011214,93013852,93015737,93018136,93019831,93020317,93022327,93029874,93032769,93034541,93035338	92947729,92975405,92976709,93003014,93004137,93006180,93010384,93011272,93013998,93015829,93018215,93019861,93020424,93022389,93029996,93032873,93034681,93036236	Gene ID= ENSG00000127084.17 TPM= 15.51 Transcript Type= protein_coding
chr9	92963961	93036236	92963961	93036236	+	ENST00000416701.6@FGD3	ENST00000416701.6	protein_coding	92963961,92975238,92976208,93002925,93004001,93006024,93010246,93011214,93013852,93015737,93018136,93019831,93020317,93022327,93029874,93032769,93034544,93035338	92964353,92975405,92976709,93003014,93004137,93006180,93010384,93011272,93013998,93015829,93018215,93019861,93020424,93022389,93029996,93032873,93034681,93036236	Gene ID= ENSG00000127084.17 TPM= 22.42 Transcript Type= protein_coding
chr9	92964317	93036232	92964317	93036232	+	transcript2039.chr9.nic@FGD3	transcript2039.chr9.nic	protein_coding	92964317,92975238,92976208,93002925,93004001,93006024,93010246,93011214,93013852,93015737,93018136,93019831,93022327,93029874,93032769,93034541,93035338	92964353,92975405,92976709,93003014,93004137,93006180,93010384,93011272,93013998,93015829,93018215,93020424,93022389,93029996,93032873,93034681,93036232	Gene ID= ENSG00000127084.17 TPM= 4.41 Transcript Type= NA
chr9	93031403	93036232	93031403	93036232	+	transcript2042.chr9.nic@FGD3	transcript2042.chr9.nic	protein_coding	93031403,93035338	93034681,93036232	Gene ID= ENSG00000127084.17 TPM= 6.36 Transcript Type= NA
chr9	92974482	93036232	92974482	93036232	+	ENST00000337352.10@FGD3	ENST00000337352.10	protein_coding	92974482,92975238,92976208,93002925,93004001,93006024,93010246,93011214,93013852,93015737,93018136,93019831,93020317,93022327,93029874,93032769,93034541,93035338	92974746,92975405,92976709,93003014,93004137,93006180,93010384,93011272,93013998,93015829,93018215,93019861,93020424,93022389,93029996,93032873,93034681,93036232	Gene ID= ENSG00000127084.17 TPM= 15.51 Transcript Type= protein_coding
chr9	93058707	93085138	93058707	93085138	+	ENST00000375472.7@SUSD3	ENST00000375472.7	protein_coding	93058707,93075784,93077846,93079471,93084537	93058830,93075972,93077993,93079602,93085138	Gene ID= ENSG00000157303.10 TPM= 3.5 Transcript Type= protein_coding
chr9	93096238	93113283	93096238	93113283	+	transcript2050.chr9.nic@CARD19	transcript2050.chr9.nic	protein_coding	93096238,93107674,93110568,93112218,93112992	93096352,93107827,93110721,93112289,93113283	Gene ID= ENSG00000165233.17 TPM= 2.34 Transcript Type= NA
chr9	93096163	93113283	93096163	93113283	+	transcript2051.chr9.nic@CARD19	transcript2051.chr9.nic	protein_coding	93096163,93107674,93110568,93112992	93096352,93107827,93112289,93113283	Gene ID= ENSG00000165233.17 TPM= 4.67 Transcript Type= NA
chr9	93096218	93113282	93096218	93113282	+	ENST00000466409.1@CARD19	ENST00000466409.1	protein_coding	93096218,93107674,93110568,93112992	93096352,93107816,93112289,93113282	Gene ID= ENSG00000165233.17 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr9	93096218	93113282	93096218	93113282	+	ENST00000375464.6@CARD19	ENST00000375464.6	protein_coding	93096218,93107674,93110568,93111879,93112218,93112992	93096352,93107816,93110721,93111938,93112289,93113282	Gene ID= ENSG00000165233.17 TPM= 30.36 Transcript Type= protein_coding
chr9	93121489	93134288	93121489	93134288	-	ENST00000375446.4@NINJ1	ENST00000375446.4	protein_coding	93134143,93126410,93124899,93121489	93134288,93126638,93125062,93122230	Gene ID= ENSG00000131669.9 TPM= 120.26 Transcript Type= protein_coding
chr9	93443311	93445193	93443311	93445193	-	transcript2084.chr9.nnic@NA	transcript2084.chr9.nnic	NA	93443311	93445193	Gene ID= novel_gene_chr9_2085 TPM= 2.34 Transcript Type= NA
chr9	93446494	93451562	93446494	93451562	-	ENST00000423591.5@FAM120AOS	ENST00000423591.5	protein_coding	93451088,93450479,93446494	93451562,93450599,93447697	Gene ID= ENSG00000188938.15 TPM= 42.62 Transcript Type= protein_coding
chr9	93446494	93451524	93446494	93451524	-	ENST00000479094.5@FAM120AOS	ENST00000479094.5	protein_coding	93450945,93450479,93446494	93451524,93450599,93447697	Gene ID= ENSG00000188938.15 TPM= 5.25 Transcript Type= processed_transcript
chr9	93451722	93566107	93451722	93566107	+	ENST00000277165.10@FAM120A	ENST00000277165.10	protein_coding	93451722,93471141,93476256,93497471,93498790,93515667,93515983,93527155,93529353,93532155,93543222,93550577,93556382,93557827,93558581,93561109,93562208,93564229	93452389,93471387,93476338,93497599,93498886,93515767,93516269,93527242,93529580,93532329,93543471,93550691,93556591,93558010,93558718,93561250,93562304,93566107	Gene ID= ENSG00000048828.16 TPM= 85.23 Transcript Type= protein_coding
chr9	93576407	93679587	93576407	93679587	+	ENST00000359246.8@PHF2	ENST00000359246.8	protein_coding	93576407,93629970,93636411,93645629,93649071,93653179,93654413,93655934,93656489,93658145,93659511,93660192,93662907,93663517,93665686,93665990,93667080,93673585,93674927,93675680,93676594,93677588	93576871,93630055,93636525,93645789,93649212,93653365,93654575,93656021,93656595,93658236,93659600,93660560,93663026,93663635,93665864,93666060,93667240,93673862,93675022,93675789,93676963,93679587	Gene ID= ENSG00000197724.10 TPM= 49.04 Transcript Type= protein_coding
chr9	93655278	93658843	93655278	93658843	-	transcript2087.chr9.nnic@NA	transcript2087.chr9.nnic	NA	93655278	93658843	Gene ID= novel_gene_chr9_2088 TPM= 3.5 Transcript Type= NA
chr9	94030794	94109856	94030794	94109856	+	ENST00000375360.7@PTPDC1	ENST00000375360.7	protein_coding	94030794,94064734,94085251,94087831,94088145,94095317,94097321,94101566,94104275,94107828	94031127,94064821,94085422,94087911,94088263,94095454,94098579,94101751,94104385,94109856	Gene ID= ENSG00000158079.14 TPM= 2.34 Transcript Type= protein_coding
chr9	94069825	94072850	94069825	94072850	-	transcript2095.chr9.nnic@NA	transcript2095.chr9.nnic	NA	94069825	94072850	Gene ID= novel_gene_chr9_2096 TPM= 3.5 Transcript Type= NA
chr9	94169154	94172275	94169154	94172275	-	transcript2098.chr9.nnic@NA	transcript2098.chr9.nnic	NA	94169154	94172275	Gene ID= novel_gene_chr9_2099 TPM= 40.87 Transcript Type= NA
chr9	94374527	94460920	94374527	94460920	+	transcript2112.chr9.nnic@MFSD14B	transcript2112.chr9.nnic	protein_coding	94374527,94415158,94429189,94438401,94440985,94444964,94446823,94451456,94453958,94458322,94459161	94374927,94415253,94429251,94438528,94441099,94445182,94446936,94451527,94454070,94458464,94460920	Gene ID= ENSG00000148110.15 TPM= 39.23 Transcript Type= NA
chr9	94374412	94460920	94374412	94460920	+	transcript2114.chr9.nnic@MFSD14B	transcript2114.chr9.nnic	protein_coding	94374412,94415158,94429189,94438401,94440985,94446823,94451456,94453958,94456240,94458322,94459161	94374927,94415253,94429251,94438528,94441099,94446936,94451527,94454070,94456337,94458464,94460920	Gene ID= ENSG00000148110.15 TPM= 21.23 Transcript Type= NA
chr9	94399809	94401543	94399809	94401543	-	transcript2123.chr9.nnic@NA	transcript2123.chr9.nnic	NA	94399809	94401543	Gene ID= novel_gene_chr9_2124 TPM= 2.34 Transcript Type= NA
chr9	94603133	94639507	94603133	94639507	-	ENST00000375326.8@FBP1	ENST00000375326.8	protein_coding	94639141,94620329,94617768,94609921,94606815,94605457,94603133	94639507,94620491,94617860,94610061,94606952,94605576,94603572	Gene ID= ENSG00000165140.9 TPM= 896.71 Transcript Type= protein_coding
chr9	95003929	95087159	95003929	95087159	+	transcript2156.chr9.nic@C9orf3	transcript2156.chr9.nic	protein_coding	95003929,95005158,95005542,95060694,95080694,95082575,95086682	95004286,95005220,95005616,95060810,95080780,95082719,95087159	Gene ID= ENSG00000148120.16 TPM= 6.71 Transcript Type= NA
chr9	95004963	95087159	95004963	95087159	+	transcript2160.chr9.nic@C9orf3	transcript2160.chr9.nic	protein_coding	95004963,95005158,95005542,95060694,95080694,95082575,95086682	95005065,95005220,95005616,95060810,95080780,95082719,95087159	Gene ID= ENSG00000148120.16 TPM= 14.89 Transcript Type= NA
chr9	95004185	95087159	95004185	95087159	+	transcript2163.chr9.nic@C9orf3	transcript2163.chr9.nic	protein_coding	95004185,95005158,95005542,95060694,95080694,95086682	95004286,95005220,95005616,95060810,95080780,95087159	Gene ID= ENSG00000148120.16 TPM= 3.79 Transcript Type= NA
chr9	95048524	95087159	95048524	95087159	+	transcript2176.chr9.nic@C9orf3	transcript2176.chr9.nic	protein_coding	95048524,95060694,95080694,95082575,95086682	95049055,95060810,95080780,95082719,95087159	Gene ID= ENSG00000148120.16 TPM= 2.63 Transcript Type= NA
chr9	94921204	94933671	94921204	94933671	+	ENST00000473778.5@C9orf3	ENST00000473778.5	protein_coding	94921204,94923986,94928425,94931715	94921345,94924175,94928531,94933671	Gene ID= ENSG00000148120.16 TPM= 1.17 Transcript Type= processed_transcript
chr9	95004963	95020936	95004963	95020936	+	transcript2182.chr9.nic@C9orf3	transcript2182.chr9.nic	protein_coding	95004963,95005158,95005542,95019450	95005065,95005220,95005616,95020936	Gene ID= ENSG00000148120.16 TPM= 3.5 Transcript Type= NA
chr9	95238550	95317703	95238550	95317703	-	transcript2197.chr9.nic@FANCC	transcript2197.chr9.nic	protein_coding	95317526,95249127,95247432,95238550	95317703,95249369,95247516,95240743	Gene ID= ENSG00000158169.12 TPM= 4.67 Transcript Type= NA
chr9	95099054	95317702	95099054	95317702	-	ENST00000289081.7@FANCC	ENST00000289081.7	protein_coding	95317526,95249127,95247432,95240649,95172037,95171079,95149923,95135346,95126529,95125086,95117315,95114629,95111463,95107066,95099054	95317702,95249369,95247516,95240743,95172147,95171143,95150087,95135502,95126581,95125185,95117390,95114710,95111637,95107269,95101850	Gene ID= ENSG00000158169.12 TPM= 5.25 Transcript Type= protein_coding
chr9	95099055	95317225	95099055	95317225	-	ENST00000375305.5@FANCC	ENST00000375305.5	protein_coding	95317129,95249127,95247432,95240649,95172037,95171079,95149923,95135346,95126529,95125086,95117315,95114629,95111463,95107066,95099055	95317225,95249369,95247516,95240743,95172147,95171143,95150087,95135502,95126581,95125185,95117390,95114710,95111637,95107269,95101850	Gene ID= ENSG00000158169.12 TPM= 4.09 Transcript Type= protein_coding
chr9	95806092	95808812	95806092	95808812	-	transcript2202.chr9.nnic@NA	transcript2202.chr9.nnic	NA	95806092	95808812	Gene ID= novel_gene_chr9_2203 TPM= 2.34 Transcript Type= NA
chr9	96015700	96018445	96015700	96018445	+	transcript2214.chr9.nnic@NA	transcript2214.chr9.nnic	NA	96015700	96018445	Gene ID= novel_gene_chr9_2215 TPM= 4.67 Transcript Type= NA
chr9	96019732	96021760	96019732	96021760	-	ENST00000412122.2@LINC00092	ENST00000412122.2	lincRNA	96021585,96019732	96021760,96021281	Gene ID= ENSG00000225194.2 TPM= 3.5 Transcript Type= lincRNA
chr9	96313446	96383710	96313446	96383710	-	transcript2219.chr9.nnic@SLC35D2	transcript2219.chr9.nnic	protein_coding	96383477,96368272,96364464,96360154,96352038,96351103,96345299,96343904,96336717,96324091,96321998,96320998,96313446	96383710,96368305,96364550,96360221,96352109,96351171,96345401,96343996,96336784,96324169,96322080,96321341,96314899	Gene ID= ENSG00000130958.11 TPM= 3.5 Transcript Type= NA
chr9	96320707	96383655	96320707	96383655	-	transcript2227.chr9.nnic@SLC35D2	transcript2227.chr9.nnic	protein_coding	96383477,96368272,96364464,96360154,96352038,96351103,96345299,96343904,96324091,96321998,96320707	96383655,96368305,96364550,96360221,96352109,96351171,96345401,96343996,96324169,96322080,96321341	Gene ID= ENSG00000130958.11 TPM= 2.72 Transcript Type= NA
chr9	96350348	96383667	96350348	96383667	-	transcript2233.chr9.nic@SLC35D2	transcript2233.chr9.nic	protein_coding	96383477,96368272,96364464,96360154,96350348	96383667,96368305,96364550,96360221,96352109	Gene ID= ENSG00000130958.11 TPM= 2.34 Transcript Type= NA
chr9	96320706	96383697	96320706	96383697	-	ENST00000253270.11@SLC35D2	ENST00000253270.11	protein_coding	96383477,96368272,96364464,96360154,96352038,96351103,96345299,96343904,96336717,96324091,96321998,96320706	96383697,96368305,96364550,96360221,96352109,96351171,96345401,96343996,96336784,96324169,96322080,96321341	Gene ID= ENSG00000130958.11 TPM= 26.07 Transcript Type= protein_coding
chr9	96320707	96383710	96320707	96383710	-	ENST00000375259.8@SLC35D2	ENST00000375259.8	protein_coding	96383477,96368272,96364464,96360154,96352038,96351103,96324091,96321998,96320707	96383710,96368305,96364550,96360221,96352109,96351171,96324169,96322080,96321341	Gene ID= ENSG00000130958.11 TPM= 1.55 Transcript Type= protein_coding
chr9	96385941	96418329	96385941	96418329	-	ENST00000375256.4@ZNF367	ENST00000375256.4	protein_coding	96417613,96398164,96394823,96392398,96385941	96418329,96398314,96394942,96392536,96388459	Gene ID= ENSG00000165244.6 TPM= 1.17 Transcript Type= protein_coding
chr9	96416721	96417419	96416721	96417419	-	transcript2237.chr9.nnic@NA	transcript2237.chr9.nnic	NA	96416721	96417419	Gene ID= novel_gene_chr9_2238 TPM= 2.34 Transcript Type= NA
chr9	96450205	96491336	96450205	96491336	+	ENST00000375249.4@HABP4	ENST00000375249.4	protein_coding	96450205,96458379,96465337,96465710,96471011,96484462,96488089,96489982	96450628,96458541,96465498,96465778,96471094,96484633,96488274,96491336	Gene ID= ENSG00000130956.13 TPM= 25.69 Transcript Type= protein_coding
chr9	96500113	96619830	96500113	96619830	-	ENST00000375241.5@CDC14B	ENST00000375241.5	protein_coding	96619219,96565393,96564777,96562693,96551796,96541826,96539078,96534455,96533927,96523587,96523261,96522506,96509673,96500113	96619830,96565483,96564852,96562785,96551872,96541892,96539140,96534542,96534157,96523725,96523420,96522603,96509789,96503789	Gene ID= ENSG00000081377.16 TPM= 1.75 Transcript Type= protein_coding
chr9	96500111	96566889	96500111	96566889	-	transcript2253.chr9.nic@CDC14B	transcript2253.chr9.nic	protein_coding	96566768,96565393,96564777,96562693,96551796,96541826,96539078,96534455,96533927,96523587,96523261,96522506,96500111	96566889,96565483,96564852,96562785,96551872,96541892,96539140,96534542,96534157,96523725,96523420,96522603,96503789	Gene ID= ENSG00000081377.16 TPM= 2.92 Transcript Type= NA
chr9	96641251	96654934	96641251	96654934	-	transcript2259.chr9.nic@AAED1	transcript2259.chr9.nic	protein_coding	96654705,96651659,96651390,96645893,96641251	96654934,96651712,96651495,96646024,96641886	Gene ID= ENSG00000158122.11 TPM= 3.5 Transcript Type= NA
chr9	96641251	96655348	96641251	96655348	-	transcript2260.chr9.nic@AAED1	transcript2260.chr9.nic	protein_coding	96655090,96654705,96651659,96651390,96641251	96655348,96654773,96651712,96651495,96641886	Gene ID= ENSG00000158122.11 TPM= 5.84 Transcript Type= NA
chr9	96639577	96655281	96639577	96655281	-	ENST00000375234.7@AAED1	ENST00000375234.7	protein_coding	96655090,96654705,96651659,96651390,96645893,96639577	96655281,96654773,96651712,96651495,96646024,96641886	Gene ID= ENSG00000158122.11 TPM= 11.68 Transcript Type= protein_coding
chr9	96687038	96773977	96687038	96773977	+	transcript2270.chr9.nnic@AL589843.1	transcript2270.chr9.nnic	lincRNA	96687038,96687198,96719509,96720966,96773460	96687107,96687324,96720234,96721130,96773977	Gene ID= ENSG00000224848.1 TPM= 2.34 Transcript Type= NA
chr9	96754554	96759211	96754554	96759211	-	transcript2278.chr9.nnic@NA	transcript2278.chr9.nnic	NA	96754554	96759211	Gene ID= novel_gene_chr9_2279 TPM= 3.5 Transcript Type= NA
chr9	96758020	96854408	96758020	96854408	-	transcript2263.chr9.nnic@ZNF510	transcript2263.chr9.nnic	protein_coding	96854088,96851947,96844890,96827080,96776000,96774788,96763506,96763118,96758020	96854408,96852005,96845016,96827181,96776245,96774846,96763632,96763213,96760477	Gene ID= ENSG00000081386.12 TPM= 3.5 Transcript Type= NA
chr9	96816991	96854506	96816991	96854506	-	transcript2275.chr9.nnic@ZNF782	transcript2275.chr9.nnic	protein_coding	96854088,96844890,96827080,96816991	96854506,96845016,96827181,96819778	Gene ID= ENSG00000196597.11 TPM= 2.34 Transcript Type= NA
chr9	96888315	96890565	96888315	96890565	-	transcript2302.chr9.nnic@NA	transcript2302.chr9.nnic	NA	96888315	96890565	Gene ID= novel_gene_chr9_2303 TPM= 2.34 Transcript Type= NA
chr9	96932979	97013764	96932979	97013764	-	transcript2286.chr9.nic@MFSD14C	transcript2286.chr9.nic	protein_coding	97013259,96972853,96958835,96949555,96942603,96932979	97013764,96972948,96958897,96949682,96942752,96933915	Gene ID= ENSG00000196312.12 TPM= 3.89 Transcript Type= NA
chr9	96933259	97013663	96933259	97013663	-	transcript2291.chr9.nic@MFSD14C	transcript2291.chr9.nic	protein_coding	97013259,96958835,96949555,96942603,96933259	97013663,96958897,96949682,96942752,96933915	Gene ID= ENSG00000196312.12 TPM= 2.34 Transcript Type= NA
chr9	96947325	97013593	96947325	97013593	-	transcript2297.chr9.nnic@MFSD14C	transcript2297.chr9.nnic	protein_coding	97013259,96972853,96958835,96948125,96947325	97013593,96972948,96958897,96949682,96947420	Gene ID= ENSG00000196312.12 TPM= 3.89 Transcript Type= NA
chr9	96942913	97013600	96942913	97013600	-	ENST00000637864.1@MFSD14C	ENST00000637864.1	protein_coding	97013259,96972853,96958835,96949555,96942913	97013600,96972948,96958897,96949682,96944085	Gene ID= ENSG00000196312.12 TPM= 16.73 Transcript Type= protein_coding
chr9	97411950	97496125	97411950	97496125	+	ENST00000355295.4@TDRD7	ENST00000355295.4	protein_coding	97411950,97428460,97430933,97432025,97439245,97441658,97460178,97464842,97470558,97472293,97473492,97475383,97478439,97480828,97482849,97487172,97495663	97412238,97428672,97431074,97432238,97439318,97441875,97460764,97465028,97470669,97472495,97473626,97475469,97478573,97480938,97483351,97487332,97496125	Gene ID= ENSG00000196116.7 TPM= 84.07 Transcript Type= protein_coding
chr9	97501639	97601748	97501639	97601748	+	ENST00000259365.8@TMOD1	ENST00000259365.8	protein_coding	97501639,97524141,97546185,97553281,97562732,97564038,97565848,97568894,97591291,97599634	97501803,97524308,97546341,97553400,97562821,97564168,97565955,97569037,97591435,97601748	Gene ID= ENSG00000136842.13 TPM= 5.25 Transcript Type= protein_coding
chr9	97575040	97601741	97575040	97601741	+	transcript2359.chr9.nnic@TMOD1	transcript2359.chr9.nnic	protein_coding	97575040,97591291,97599634	97575486,97591435,97601741	Gene ID= ENSG00000136842.13 TPM= 2.92 Transcript Type= NA
chr9	97600083	97633326	97600083	97633326	-	transcript2337.chr9.nnic@TSTD2	transcript2337.chr9.nnic	protein_coding	97633243,97627398,97625681,97617757,97611574,97610346,97606143,97605483,97604727,97600083	97633326,97627612,97625969,97617877,97611699,97610451,97606261,97605641,97604865,97602767	Gene ID= ENSG00000136925.14 TPM= 2.92 Transcript Type= NA
chr9	97600083	97633575	97600083	97633575	-	ENST00000341170.4@TSTD2	ENST00000341170.4	protein_coding	97633243,97627398,97625681,97617757,97611574,97610346,97606143,97605483,97604727,97600083	97633575,97627612,97625997,97617877,97611699,97610451,97606261,97605641,97604865,97602767	Gene ID= ENSG00000136925.14 TPM= 32.11 Transcript Type= protein_coding
chr9	97674909	97697357	97674909	97697357	-	ENST00000375128.4@XPA	ENST00000375128.4	protein_coding	97697121,97693649,97689534,97687096,97684923,97674909	97697357,97693759,97689639,97687261,97685040,97675587	Gene ID= ENSG00000136936.10 TPM= 9.34 Transcript Type= protein_coding
chr9	97904489	97922570	97904489	97922570	-	ENST00000375119.7@TRMO	ENST00000375119.7	protein_coding	97922418,97916164,97913401,97909960,97904489	97922570,97916338,97913558,97910616,97904992	Gene ID= ENSG00000136932.13 TPM= 5.84 Transcript Type= protein_coding
chr9	97983361	98015943	97983361	98015943	+	ENST00000339399.4@ANP32B	ENST00000339399.4	protein_coding	97983361,97994631,97998556,98004964,98011271,98012421,98015364	97983609,97994780,97998678,98005153,98011389,98012472,98015943	Gene ID= ENSG00000136938.8 TPM= 64.22 Transcript Type= protein_coding
chr9	98056658	98083075	98056658	98083075	+	transcript2391.chr9.nnic@NANS	transcript2391.chr9.nnic	protein_coding	98056658,98060782,98076918,98078193,98080850,98082846	98056940,98060997,98077017,98078347,98081082,98083075	Gene ID= ENSG00000095380.10 TPM= 2.72 Transcript Type= NA
chr9	98056658	98083075	98056658	98083075	+	transcript2392.chr9.nnic@NANS	transcript2392.chr9.nnic	protein_coding	98056658,98060782,98076918,98078294,98080816,98082846	98056940,98060997,98077017,98078347,98081082,98083075	Gene ID= ENSG00000095380.10 TPM= 2.72 Transcript Type= NA
chr9	98056739	98083075	98056739	98083075	+	ENST00000210444.5@NANS	ENST00000210444.5	protein_coding	98056739,98060782,98076918,98078193,98080816,98082846	98056940,98060997,98077017,98078347,98081082,98083075	Gene ID= ENSG00000095380.10 TPM= 72.78 Transcript Type= protein_coding
chr9	98084355	98119198	98084355	98119198	-	ENST00000341469.6@TRIM14	ENST00000341469.6	protein_coding	98118982,98109889,98099931,98094867,98091909,98084355	98119198,98109984,98100164,98095029,98092001,98088005	Gene ID= ENSG00000106785.14 TPM= 49.04 Transcript Type= protein_coding
chr9	98120975	98192640	98120975	98192640	-	ENST00000375077.4@CORO2A	ENST00000375077.4	protein_coding	98192559,98157460,98137572,98134806,98133038,98132185,98130955,98129794,98128607,98128170,98126549,98120975	98192640,98157660,98137688,98134955,98133217,98132301,98131059,98129890,98128719,98128260,98126823,98124905	Gene ID= ENSG00000106789.12 TPM= 38.53 Transcript Type= protein_coding
chr9	98232343	98255755	98232343	98255755	-	transcript2433.chr9.nic@TBC1D2	transcript2433.chr9.nic	protein_coding	98255173,98251785,98243994,98232343	98255755,98251926,98244129,98233549	Gene ID= ENSG00000095383.19 TPM= 5.84 Transcript Type= NA
chr9	98199029	98255590	98199029	98255590	-	ENST00000342112.9@TBC1D2	ENST00000342112.9	protein_coding	98255173,98243994,98233416,98228952,98220833,98213108,98210656,98208668,98203288,98201479,98200253,98199029	98255590,98244129,98233549,98229148,98221228,98213218,98210843,98209144,98203408,98201664,98200374,98199588	Gene ID= ENSG00000095383.19 TPM= 60.13 Transcript Type= protein_coding
chr9	98288082	98709197	98288082	98709197	-	ENST00000259455.3@GABBR2	ENST00000259455.3	protein_coding	98708417,98577935,98541873,98496413,98480932,98473146,98453981,98406081,98394175,98388854,98385640,98371464,98362715,98311095,98306121,98303241,98299224,98293785,98288082	98709197,98578072,98542043,98496514,98480997,98473346,98454217,98406141,98394255,98389004,98385772,98371571,98362837,98311205,98306345,98303423,98299353,98293902,98290749	Gene ID= ENSG00000136928.6 TPM= 2.34 Transcript Type= protein_coding
chr9	98732013	98796555	98732013	98796555	-	transcript2442.chr9.nnic@ANKS6	transcript2442.chr9.nnic	protein_coding	98796133,98784832,98783953,98782467,98780189,98778226,98777405,98773877,98770896,98768081,98756420,98751029,98745559,98736527,98732013	98796555,98784876,98784157,98782573,98780337,98778424,98777454,98774080,98771046,98768250,98756603,98751096,98745675,98736623,98732553	Gene ID= ENSG00000165138.17 TPM= 2.34 Transcript Type= NA
chr9	98735420	98796558	98735420	98796558	-	transcript2444.chr9.nic@ANKS6	transcript2444.chr9.nic	protein_coding	98796133,98790104,98784832,98783953,98782467,98780189,98778226,98777405,98773877,98770896,98768081,98756420,98751029,98745559,98735420	98796558,98790606,98784876,98784157,98782573,98780337,98778424,98777454,98774080,98771046,98768250,98756606,98751096,98745675,98736623	Gene ID= ENSG00000165138.17 TPM= 4.67 Transcript Type= NA
chr9	98783570	98796558	98783570	98796558	-	transcript2453.chr9.nnic@ANKS6	transcript2453.chr9.nnic	protein_coding	98796133,98790104,98784832,98784380,98783570	98796558,98790606,98784876,98784500,98784157	Gene ID= ENSG00000165138.17 TPM= 4.67 Transcript Type= NA
chr9	98783570	98796547	98783570	98796547	-	transcript2454.chr9.nnic@ANKS6	transcript2454.chr9.nnic	protein_coding	98796133,98791483,98790104,98784832,98783570	98796547,98791597,98790606,98784876,98784157	Gene ID= ENSG00000165138.17 TPM= 4.09 Transcript Type= NA
chr9	98783570	98796558	98783570	98796558	-	transcript2455.chr9.nic@ANKS6	transcript2455.chr9.nic	protein_coding	98796133,98790104,98784832,98783570	98796558,98790606,98784876,98784157	Gene ID= ENSG00000165138.17 TPM= 5.25 Transcript Type= NA
chr9	98783570	98796555	98783570	98796555	-	transcript2457.chr9.nnic@ANKS6	transcript2457.chr9.nnic	protein_coding	98796133,98784832,98783570	98796555,98784876,98784157	Gene ID= ENSG00000165138.17 TPM= 5.84 Transcript Type= NA
chr9	98788304	98793553	98788304	98793553	+	transcript2459.chr9.nnic@NA	transcript2459.chr9.nnic	NA	98788304	98793553	Gene ID= novel_gene_chr9_2460 TPM= 11.68 Transcript Type= NA
chr9	98807626	98850081	98807626	98850081	+	transcript2465.chr9.nnic@GALNT12	transcript2465.chr9.nnic	protein_coding	98807626,98823256,98826752,98831772,98835249,98836972,98840002,98844096,98845977,98848952	98808069,98823425,98826941,98831957,98835279,98837148,98840133,98844209,98846123,98850081	Gene ID= ENSG00000119514.6 TPM= 2.34 Transcript Type= NA
chr9	98807626	98850081	98807626	98850081	+	transcript2468.chr9.nnic@GALNT12	transcript2468.chr9.nnic	protein_coding	98807626,98823256,98826752,98835249,98836972,98840002,98844096,98845977,98848952	98808069,98823425,98826941,98835366,98837148,98840133,98844209,98846123,98850081	Gene ID= ENSG00000119514.6 TPM= 2.34 Transcript Type= NA
chr9	98807699	98850081	98807699	98850081	+	ENST00000375011.3@GALNT12	ENST00000375011.3	protein_coding	98807699,98823256,98826752,98831772,98835249,98836972,98840002,98844096,98845977,98848952	98808069,98823425,98826941,98831957,98835366,98837148,98840133,98844209,98846123,98850081	Gene ID= ENSG00000119514.6 TPM= 74.73 Transcript Type= protein_coding
chr9	98835741	98837133	98835741	98837133	-	transcript2474.chr9.nnic@NA	transcript2474.chr9.nnic	NA	98835741	98837133	Gene ID= novel_gene_chr9_2475 TPM= 2.34 Transcript Type= NA
chr9	98943797	99041377	98943797	99041377	+	transcript2481.chr9.nic@COL15A1	transcript2481.chr9.nic	protein_coding	98943797,98944162,98985565,98987294,98989178,98996934,99000839,99003453,99004898,99015417,99015976,99020389,99022091,99023357,99024874,99025904,99034549,99035014,99035350,99036170,99036313,99038668,99040521,99040704	98944072,98944250,98986112,98987368,98989258,98997081,99000951,99003587,99005050,99015566,99016119,99020442,99022150,99023449,99024999,99025966,99034584,99035154,99035418,99036205,99036396,99038733,99040556,99041377	Gene ID= ENSG00000204291.10 TPM= 3.5 Transcript Type= NA
chr9	99105150	99153658	99105150	99153658	+	ENST00000552516.5@TGFBR1	ENST00000552516.5	protein_coding	99105150,99128855,99132497,99137859,99142536,99144732,99146485,99147654,99149180	99105302,99129100,99132739,99138089,99142703,99144888,99146609,99147784,99153658	Gene ID= ENSG00000106799.12 TPM= 138.36 Transcript Type= protein_coding
chr9	99105089	99154192	99105089	99154192	+	ENST00000374994.8@TGFBR1	ENST00000374994.8	protein_coding	99105089,99128855,99132509,99137859,99142536,99144732,99146485,99147654,99149180	99105302,99129100,99132739,99138089,99142703,99144888,99146609,99147784,99154192	Gene ID= ENSG00000106799.12 TPM= 8.76 Transcript Type= protein_coding
chr9	99117255	99123586	99117255	99123586	-	transcript2489.chr9.nnic@NA	transcript2489.chr9.nnic	NA	99117255	99123586	Gene ID= novel_gene_chr9_2490 TPM= 2.34 Transcript Type= NA
chr9	99216426	99221942	99216426	99221942	-	ENST00000238477.5@ALG2	ENST00000238477.5	protein_coding	99221547,99220979,99216426	99221942,99221137,99218836	Gene ID= ENSG00000119523.9 TPM= 4.67 Transcript Type= nonsense_mediated_decay
chr9	99217367	99221956	99217367	99221956	-	ENST00000476832.1@ALG2	ENST00000476832.1	protein_coding	99221547,99217367	99221956,99218836	Gene ID= ENSG00000119523.9 TPM= 45.54 Transcript Type= protein_coding
chr9	99217361	99221941	99217361	99221941	-	transcript2496.chr9.nnic@NA	transcript2496.chr9.nnic	NA	99217361	99221941	Gene ID= novel_gene_chr9_2497 TPM= 4.67 Transcript Type= NA
chr9	99222301	99230615	99222301	99230615	+	ENST00000223641.4@SEC61B	ENST00000223641.4	protein_coding	99222301,99222546,99227899,99230337	99222366,99222643,99228000,99230615	Gene ID= ENSG00000106803.9 TPM= 91.07 Transcript Type= protein_coding
chr9	99906633	99970341	99906633	99970341	+	ENST00000259400.10@STX17	ENST00000259400.10	protein_coding	99906633,99915178,99928778,99951060,99959917,99960105,99967653,99968434	99906706,99915362,99928843,99951285,99960032,99960155,99967739,99970341	Gene ID= ENSG00000136874.10 TPM= 4.67 Transcript Type= protein_coding
chr9	99906654	99953036	99906654	99953036	+	transcript2519.chr9.nic@STX17	transcript2519.chr9.nic	protein_coding	99906654,99915178,99928778,99951060	99906706,99915362,99928843,99953036	Gene ID= ENSG00000136874.10 TPM= 3.5 Transcript Type= NA
chr9	99971744	99974532	99971744	99974532	+	transcript2520.chr9.nnic@NA	transcript2520.chr9.nnic	NA	99971744	99974532	Gene ID= novel_gene_chr9_2521 TPM= 2.34 Transcript Type= NA
chr9	99979179	100099040	99979179	100099040	-	ENST00000262455.6@ERP44	ENST00000262455.6	protein_coding	100098784,100060100,100057820,100052417,100022042,100020616,100018256,100016322,100007578,100006506,99984967,99979179	100099040,100060172,100057859,100052532,100022226,100020731,100018313,100016438,100007689,100006647,99985069,99982713	Gene ID= ENSG00000023318.7 TPM= 5.84 Transcript Type= protein_coding
chr9	100099242	100273076	100099242	100273076	+	transcript2529.chr9.nic@INVS	transcript2529.chr9.nic	protein_coding	100099242,100104498,100126383,100131870,100214925,100215401,100226062,100229660,100240060,100242570,100246616,100252283,100252907,100264822,100272864	100099416,100104627,100126549,100131954,100215040,100215488,100226235,100229827,100240240,100242679,100246787,100252438,100253136,100264928,100273076	Gene ID= ENSG00000119509.12 TPM= 2.34 Transcript Type= NA
chr9	100302084	100352939	100302084	100352939	-	ENST00000374902.8@TEX10	ENST00000374902.8	protein_coding	100352772,100349184,100346694,100346072,100340257,100329931,100329140,100327787,100326302,100321683,100320265,100310299,100308500,100303632,100302084	100352939,100349372,100347406,100346315,100340369,100330169,100329275,100327962,100326479,100321771,100320398,100310379,100308681,100303842,100302304	Gene ID= ENSG00000136891.13 TPM= 19.85 Transcript Type= protein_coding
chr9	100427429	100451711	100427429	100451711	+	ENST00000622639.4@MSANTD3	ENST00000622639.4	protein_coding	100427429,100441906,100450557	100427570,100442356,100451711	Gene ID= ENSG00000066697.14 TPM= 1.17 Transcript Type= protein_coding
chr9	100427156	100451229	100427156	100451229	+	ENST00000395067.6@MSANTD3	ENST00000395067.6	protein_coding	100427156,100441906,100450557	100427393,100442356,100451229	Gene ID= ENSG00000066697.14 TPM= 9.34 Transcript Type= protein_coding
chr9	100427204	100577636	100427204	100577636	+	transcript2540.chr9.nic@MSANTD3-TMEFF1	transcript2540.chr9.nic	protein_coding	100427204,100441906,100498765,100509005,100513307,100516675,100547744,100550095,100561397,100572518,100576516	100427393,100442356,100498874,100509134,100513333,100516771,100547892,100550160,100561520,100572676,100577636	Gene ID= ENSG00000251349.3 TPM= 2.34 Transcript Type= NA
chr9	101028709	101325135	101028709	101325135	+	ENST00000374874.7@PLPPR1	ENST00000374874.7	protein_coding	101028709,101185450,101269880,101286104,101309211,101312798,101317365,101324025	101029102,101185557,101270068,101286236,101309461,101312974,101317496,101325135	Gene ID= ENSG00000148123.14 TPM= 4.09 Transcript Type= protein_coding
chr9	101185035	101325131	101185035	101325131	+	ENST00000395056.2@PLPPR1	ENST00000395056.2	protein_coding	101185035,101185450,101269880,101286104,101309211,101312798,101317365,101324025	101185255,101185557,101270068,101286236,101309461,101312974,101317496,101325131	Gene ID= ENSG00000148123.14 TPM= 2.92 Transcript Type= protein_coding
chr9	101387633	101398614	101387633	101398614	-	ENST00000374865.4@MRPL50	ENST00000374865.4	protein_coding	101398501,101387633	101398614,101390850	Gene ID= ENSG00000136897.7 TPM= 12.84 Transcript Type= protein_coding
chr9	101398873	101410660	101398873	101410660	+	ENST00000374861.7@ZNF189	ENST00000374861.7	protein_coding	101398873,101399926,101407929	101399189,101400010,101410660	Gene ID= ENSG00000136870.10 TPM= 1.75 Transcript Type= protein_coding
chr9	101399028	101410660	101399028	101410660	+	ENST00000259395.4@ZNF189	ENST00000259395.4	protein_coding	101399028,101399395,101399926,101407929	101399189,101399530,101400010,101410660	Gene ID= ENSG00000136870.10 TPM= 1.75 Transcript Type= protein_coding
chr9	101474988	101486813	101474988	101486813	-	transcript2566.chr9.nnic@TMEM246	transcript2566.chr9.nnic	protein_coding	101486568,101474988	101486813,101477169	Gene ID= ENSG00000165152.8 TPM= 3.5 Transcript Type= NA
chr9	101475328	101486813	101475328	101486813	-	transcript2569.chr9.nnic@TMEM246	transcript2569.chr9.nnic	protein_coding	101486568,101475328	101486813,101477169	Gene ID= ENSG00000165152.8 TPM= 3.5 Transcript Type= NA
chr9	101473171	101487193	101473171	101487193	-	ENST00000374848.7@TMEM246	ENST00000374848.7	protein_coding	101486949,101473171	101487193,101477169	Gene ID= ENSG00000165152.8 TPM= 4.67 Transcript Type= protein_coding
chr9	101533844	101563344	101533844	101563344	+	transcript2572.chr9.nnic@RNF20	transcript2572.chr9.nnic	protein_coding	101533844,101535398,101540203,101540490,101540793,101546820,101547137,101547399,101550606,101551684,101552141,101552383,101553988,101554694,101557384,101560801,101561090,101561910,101562246	101533914,101535552,101540370,101540637,101540975,101546966,101547214,101547518,101550785,101551819,101552262,101552753,101554105,101554843,101557596,101560926,101561230,101562011,101563344	Gene ID= ENSG00000155827.11 TPM= 2.34 Transcript Type= NA
chr9	101533851	101563344	101533851	101563344	+	ENST00000389120.7@RNF20	ENST00000389120.7	protein_coding	101533851,101535398,101540203,101540490,101540793,101544767,101546820,101547137,101547399,101550606,101551684,101552141,101552383,101553988,101554694,101557384,101560801,101561090,101561910,101562246	101533914,101535552,101540370,101540637,101540975,101544885,101546966,101547214,101547518,101550785,101551819,101552262,101552753,101554105,101554843,101557596,101560926,101561230,101562011,101563344	Gene ID= ENSG00000155827.11 TPM= 67.72 Transcript Type= protein_coding
chr9	101563690	101568992	101563690	101568992	-	transcript2579.chr9.nnic@NA	transcript2579.chr9.nnic	NA	101563690	101568992	Gene ID= novel_gene_chr9_2580 TPM= 3.5 Transcript Type= NA
chr9	104094260	104141409	104094260	104141409	+	ENST00000286398.11@SMC2	ENST00000286398.11	protein_coding	104094260,104095299,104096148,104098446,104099644,104100093,104100389,104101960,104102424,104111581,104113316,104113964,104114691,104116200,104118171,104120027,104123108,104124912,104126641,104127286,104129645,104132009,104134415,104138018,104139139	104094477,104095552,104096297,104098568,104099682,104100203,104100433,104102193,104102573,104111814,104113475,104114081,104114829,104116319,104118375,104120162,104123232,104125105,104126784,104127480,104129845,104132125,104134575,104138165,104141409	Gene ID= ENSG00000136824.18 TPM= 1.17 Transcript Type= protein_coding
chr9	104094564	104139651	104094564	104139651	+	ENST00000374787.7@SMC2	ENST00000374787.7	protein_coding	104094564,104095324,104096148,104098446,104099644,104100093,104100389,104101960,104102424,104111581,104113316,104113964,104114691,104116200,104118171,104120027,104123108,104124912,104126641,104127286,104129645,104132009,104134415,104138018,104139139	104094838,104095552,104096297,104098568,104099682,104100203,104100433,104102193,104102573,104111814,104113475,104114081,104114829,104116319,104118375,104120162,104123232,104125105,104126784,104127480,104129845,104132125,104134575,104138165,104139651	Gene ID= ENSG00000136824.18 TPM= 1.17 Transcript Type= protein_coding
chr9	104094326	104141417	104094326	104141417	+	ENST00000374793.7@SMC2	ENST00000374793.7	protein_coding	104094326,104095324,104096148,104098446,104099644,104100093,104100389,104101960,104102424,104111581,104113316,104113964,104114691,104116200,104118171,104120027,104123108,104124912,104126641,104127286,104129645,104132009,104134415,104138018,104139139	104094477,104095552,104096297,104098568,104099682,104100203,104100433,104102193,104102573,104111814,104113475,104114081,104114829,104116319,104118375,104120162,104123232,104125105,104126784,104127480,104129845,104132125,104134575,104138165,104141417	Gene ID= ENSG00000136824.18 TPM= 1.17 Transcript Type= protein_coding
chr9	104747668	104760118	104747668	104760118	+	transcript2594.chr9.nic@NIPSNAP3A	transcript2594.chr9.nic	protein_coding	104747668,104750956,104752906,104754551,104759085	104747852,104751166,104753064,104754700,104760118	Gene ID= ENSG00000136783.9 TPM= 2.34 Transcript Type= NA
chr9	104747688	104760122	104747688	104760122	+	ENST00000374767.4@NIPSNAP3A	ENST00000374767.4	protein_coding	104747688,104750956,104752906,104754551,104759085,104759262	104747852,104751166,104753064,104754700,104759171,104760122	Gene ID= ENSG00000136783.9 TPM= 44.37 Transcript Type= protein_coding
chr9	104781002	104928237	104781002	104928237	-	ENST00000374736.7@ABCA1	ENST00000374736.7	protein_coding	104927935,104903614,104889102,104884427,104883039,104861679,104858522,104845477,104840279,104837428,104836980,104832574,104831622,104830925,104828916,104826948,104825683,104824465,104822496,104821375,104819927,104819586,104818663,104817332,104816143,104814427,104814118,104812574,104810800,104809466,104806241,104804626,104803284,104802054,104800510,104799819,104798421,104796309,104796053,104794387,104793171,104792786,104791936,104790922,104788426,104787920,104786873,104786298,104785396,104781002	104928237,104903771,104889195,104884568,104883157,104861800,104858698,104845569,104840519,104837567,104837096,104832771,104831827,104831101,104829138,104827169,104825887,104824578,104822667,104821506,104820069,104819723,104818883,104817404,104816345,104814475,104814231,104812722,104810924,104809564,104806430,104804720,104803316,104802159,104800584,104799988,104798598,104796424,104796197,104794510,104793300,104792906,104791998,104791028,104788567,104788054,104786976,104786390,104785639,104784455	Gene ID= ENSG00000165029.15 TPM= 18.68 Transcript Type= protein_coding
chr9	104922021	104925387	104922021	104925387	+	transcript2600.chr9.nnic@NA	transcript2600.chr9.nnic	NA	104922021	104925387	Gene ID= novel_gene_chr9_2601 TPM= 7.01 Transcript Type= NA
chr9	105244653	105390451	105244653	105390451	+	transcript2629.chr9.nnic@SLC44A1	transcript2629.chr9.nnic	protein_coding	105244653,105299220,105335563,105348358,105356212,105358344,105361191,105362821,105364555,105365483,105366346,105374598,105383123,105385422,105389033	105244904,105299309,105335699,105348451,105356381,105358433,105361330,105363007,105364720,105365639,105366429,105374735,105383359,105385502,105390451	Gene ID= ENSG00000070214.15 TPM= 4.67 Transcript Type= NA
chr9	105244589	105438499	105244589	105438499	+	transcript2630.chr9.nnic@SLC44A1	transcript2630.chr9.nnic	protein_coding	105244589,105299220,105335563,105348358,105356212,105358344,105361191,105362821,105364555,105365483,105366346,105374598,105383123,105385422,105438281	105244904,105299309,105335699,105348451,105356381,105358433,105361330,105363007,105364720,105365639,105366429,105374735,105383359,105385502,105438499	Gene ID= ENSG00000070214.15 TPM= 4.67 Transcript Type= NA
chr9	105244965	105247808	105244965	105247808	+	transcript2633.chr9.nnic@NA	transcript2633.chr9.nnic	NA	105244965	105247808	Gene ID= novel_gene_chr9_2634 TPM= 2.34 Transcript Type= NA
chr9	106927264	107011508	106927264	107011508	+	ENST00000374686.6@ZNF462	ENST00000374686.6	protein_coding	106927264,106930525,106932266,106935503,106938916,106972005,106974137,106984186,107003294,107009545,107010823	106929759,106930689,106932549,106935621,106939107,106972272,106974273,106984409,107003426,107009668,107011508	Gene ID= ENSG00000148143.12 TPM= 2.34 Transcript Type= protein_coding
chr9	106863097	107013634	106863097	107013634	+	ENST00000277225.9@ZNF462	ENST00000277225.9	protein_coding	106863097,106923354,106924133,106930525,106932446,106935503,106938916,106972005,106974137,106984186,107003294,107009545,107010823	106863355,106923603,106929759,106930689,106932549,106935621,106939107,106972272,106974273,106984409,107003426,107009668,107013634	Gene ID= ENSG00000148143.12 TPM= 7.01 Transcript Type= protein_coding
chr9	107330218	107330892	107330218	107330892	+	transcript2655.chr9.nnic@NA	transcript2655.chr9.nnic	NA	107330218	107330892	Gene ID= novel_gene_chr9_2656 TPM= 3.5 Transcript Type= NA
chr9	107484852	107489775	107484852	107489775	-	transcript2660.chr9.nic@KLF4	transcript2660.chr9.nic	protein_coding	107489168,107487295,107487028,107484852	107489775,107489050,107487192,107485926	Gene ID= ENSG00000136826.14 TPM= 11.68 Transcript Type= NA
chr9	107484852	107489523	107484852	107489523	-	transcript2665.chr9.nic@KLF4	transcript2665.chr9.nic	protein_coding	107489168,107484852	107489523,107489050	Gene ID= ENSG00000136826.14 TPM= 8.76 Transcript Type= NA
chr9	107484852	107489646	107484852	107489646	-	ENST00000374672.4@KLF4	ENST00000374672.4	protein_coding	107489168,107488930,107487295,107487028,107484852	107489646,107489050,107488267,107487192,107485926	Gene ID= ENSG00000136826.14 TPM= 110.92 Transcript Type= protein_coding
chr9	107484852	107488447	107484852	107488447	-	ENST00000497048.5@KLF4	ENST00000497048.5	protein_coding	107487295,107487028,107484852	107488447,107487192,107485926	Gene ID= ENSG00000136826.14 TPM= 58.96 Transcript Type= retained_intron
chr9	108868641	108934318	108868641	108934318	-	transcript2671.chr9.nnic@ELP1	transcript2671.chr9.nnic	protein_coding	108933864,108930997,108929769,108927372,108926523,108922842,108919253,108918811,108917547,108916204,108912264,108911010,108908305,108906303,108903563,108902839,108901628,108901425,108900260,108899822,108898671,108898502,108897148,108896953,108896496,108893943,108892986,108891203,108889332,108882125,108881705,108880052,108879446,108878623,108877995,108874895,108868641	108934318,108931056,108929921,108927453,108926603,108922927,108919349,108918901,108917670,108916297,108912494,108911180,108908404,108906485,108903669,108902942,108901681,108901530,108900375,108899895,108898749,108898581,108897285,108897038,108896644,108894066,108893083,108891404,108889393,108882187,108881765,108880165,108879557,108878750,108878149,108874970,108869182	Gene ID= ENSG00000070061.14 TPM= 4.67 Transcript Type= NA
chr9	108867517	108934116	108867517	108934116	-	ENST00000374647.9@ELP1	ENST00000374647.9	protein_coding	108933864,108930997,108929769,108927372,108926523,108922842,108919253,108918811,108917547,108916204,108912264,108911010,108908305,108906303,108903563,108902839,108901628,108901425,108900260,108899822,108898671,108898502,108897148,108896953,108896496,108893943,108892986,108891203,108889332,108882125,108881705,108880052,108879446,108878623,108877995,108874895,108867517	108934116,108931201,108929921,108927453,108926603,108922927,108919349,108918901,108917670,108916297,108912494,108911180,108908404,108906485,108903669,108902942,108901681,108901530,108900375,108899895,108898749,108898581,108897285,108897038,108896644,108894066,108893083,108891404,108889393,108882187,108881765,108880165,108879557,108878750,108878149,108874970,108869182	Gene ID= ENSG00000070061.14 TPM= 2.34 Transcript Type= protein_coding
chr9	108934181	108940968	108934181	108940968	+	ENST00000322940.10@FAM206A	ENST00000322940.10	protein_coding	108934181,108935638,108936308,108939196,108939385,108939549	108934565,108935689,108936437,108939272,108939454,108940968	Gene ID= ENSG00000119328.11 TPM= 22.18 Transcript Type= protein_coding
chr9	108942571	109013529	108942571	109013529	-	ENST00000325551.8@CTNNAL1	ENST00000325551.8	protein_coding	109013302,108999067,108992632,108990726,108984347,108983145,108979281,108976962,108972675,108970402,108965378,108955790,108952444,108952209,108948186,108943962,108943703,108942961,108942571	109013529,108999256,108992819,108990845,108984436,108983315,108979481,108977048,108972833,108970494,108965528,108955827,108952494,108952363,108948234,108944018,108943816,108943044,108942834	Gene ID= ENSG00000119326.14 TPM= 299.2 Transcript Type= protein_coding
chr9	108942569	109013522	108942569	109013522	-	ENST00000374595.8@CTNNAL1	ENST00000374595.8	protein_coding	109013302,108999067,108992632,108990726,108984347,108983145,108979281,108976962,108972675,108970402,108965378,108955790,108952444,108952209,108948186,108943962,108943703,108942961,108942569	109013522,108999256,108992819,108990845,108984436,108983315,108979481,108977048,108972833,108970494,108965528,108955827,108952494,108952363,108948234,108944018,108943816,108943044,108942871	Gene ID= ENSG00000119326.14 TPM= 13.14 Transcript Type= protein_coding
chr9	109018926	109119937	109018926	109119937	-	transcript2707.chr9.nnic@TMEM245	transcript2707.chr9.nnic	protein_coding	109119335,109108453,109106508,109093475,109087173,109085997,109080839,109073356,109064477,109060354,109057191,109050570,109050283,109038017,109036206,109033307,109018926	109119937,109108570,109106609,109093591,109087342,109086020,109080943,109073438,109064567,109060452,109057322,109050692,109050428,109038117,109036380,109033501,109020505	Gene ID= ENSG00000106771.12 TPM= 7.01 Transcript Type= NA
chr9	109015152	109119945	109015152	109119945	-	ENST00000374586.7@TMEM245	ENST00000374586.7	protein_coding	109119335,109108453,109106508,109093475,109090922,109087173,109085997,109080839,109073356,109064477,109060354,109057191,109050570,109050283,109038017,109036206,109033307,109015152	109119945,109108570,109106609,109093591,109091155,109087342,109086020,109080943,109073438,109064567,109060452,109057322,109050692,109050428,109038117,109036380,109033501,109020505	Gene ID= ENSG00000106771.12 TPM= 26.85 Transcript Type= protein_coding
chr9	109019904	109087293	109019904	109087293	-	ENST00000413712.6@TMEM245	ENST00000413712.6	protein_coding	109087173,109080839,109073356,109064477,109060354,109057191,109050570,109050283,109038017,109036206,109033307,109019904	109087293,109080943,109073438,109064567,109060452,109057322,109050692,109050428,109038117,109036380,109033501,109020505	Gene ID= ENSG00000106771.12 TPM= 1.17 Transcript Type= protein_coding
chr9	109064536	109068384	109064536	109068384	+	transcript2719.chr9.nnic@NA	transcript2719.chr9.nnic	NA	109064536	109068384	Gene ID= novel_gene_chr9_2720 TPM= 7.01 Transcript Type= NA
chr9	109117278	109119933	109117278	109119933	-	transcript2723.chr9.nnic@NA	transcript2723.chr9.nnic	NA	109117278	109119933	Gene ID= novel_gene_chr9_2724 TPM= 4.67 Transcript Type= NA
chr9	109239731	109320964	109239731	109320964	-	ENST00000374557.4@EPB41L4B	ENST00000374557.4	protein_coding	109320141,109279817,109268391,109267473,109264980,109263050,109258177,109256393,109256136,109255774,109255511,109253441,109251481,109247756,109243618,109239731	109320964,109279921,109268433,109267551,109265024,109263102,109258297,109256480,109256224,109255843,109255680,109253550,109251511,109247789,109243682,109241809	Gene ID= ENSG00000095203.14 TPM= 5.84 Transcript Type= protein_coding
chr9	109375700	109498306	109375700	109498306	-	ENST00000374541.3@PTPN3	ENST00000374541.3	protein_coding	109498219,109463297,109457292,109457173,109454496,109448811,109445240,109438114,109436883,109433073,109428621,109426950,109422718,109420424,109410229,109409999,109408321,109406462,109404448,109391471,109391138,109389233,109383423,109382302,109381652,109375700	109498306,109463451,109457399,109457215,109454574,109448855,109445292,109438234,109436970,109433161,109428684,109427122,109422852,109420600,109410415,109410076,109408377,109406618,109404608,109391561,109391199,109389379,109383551,109382447,109381787,109379633	Gene ID= ENSG00000070159.13 TPM= 9.34 Transcript Type= protein_coding
chr9	109378236	109498295	109378236	109498295	-	transcript2733.chr9.nnic@PTPN3	transcript2733.chr9.nnic	protein_coding	109498219,109463297,109457292,109457173,109448811,109445240,109438114,109436883,109433073,109428621,109426950,109422718,109420424,109410229,109409999,109408321,109406462,109404448,109391471,109391138,109389233,109383423,109382302,109381652,109378236	109498295,109463451,109457399,109457215,109448855,109445294,109438234,109436970,109433163,109428684,109427122,109422852,109420600,109410415,109410076,109408377,109406618,109404608,109391561,109391199,109389379,109383551,109382447,109381787,109379633	Gene ID= ENSG00000070159.13 TPM= 5.84 Transcript Type= NA
chr9	110048652	110172512	110048652	110172512	+	transcript2751.chr9.nic@AKAP2	transcript2751.chr9.nic	protein_coding	110048652,110136127,110168399	110048855,110138539,110172512	Gene ID= ENSG00000241978.9 TPM= 63.83 Transcript Type= NA
chr9	110125501	110172512	110125501	110172512	+	transcript2755.chr9.nic@AKAP2	transcript2755.chr9.nic	protein_coding	110125501,110136127,110168399	110125596,110138539,110172512	Gene ID= ENSG00000241978.9 TPM= 54.09 Transcript Type= NA
chr9	110048696	110172512	110048696	110172512	+	ENST00000374525.5@AKAP2	ENST00000374525.5	protein_coding	110048696,110136127,110156319,110168399	110048855,110138539,110156497,110172512	Gene ID= ENSG00000241978.9 TPM= 102.75 Transcript Type= protein_coding
chr9	110051908	110053137	110051908	110053137	-	transcript2761.chr9.nnic@NA	transcript2761.chr9.nnic	NA	110051908	110053137	Gene ID= novel_gene_chr9_2762 TPM= 3.5 Transcript Type= NA
chr9	110058900	110061571	110058900	110061571	-	transcript2763.chr9.nnic@NA	transcript2763.chr9.nnic	NA	110058900	110061571	Gene ID= novel_gene_chr9_2764 TPM= 17.51 Transcript Type= NA
chr9	110199561	110207536	110199561	110207536	-	transcript2765.chr9.nnic@C9orf152	transcript2765.chr9.nnic	protein_coding	110207387,110204280,110199561	110207536,110204346,110201474	Gene ID= ENSG00000188959.9 TPM= 3.5 Transcript Type= NA
chr9	110199561	110208189	110199561	110208189	-	ENST00000400613.4@C9orf152	ENST00000400613.4	protein_coding	110207387,110199561	110208189,110201474	Gene ID= ENSG00000188959.9 TPM= 36.2 Transcript Type= protein_coding
chr9	110365251	110579880	110365251	110579880	-	ENST00000401783.6@SVEP1	ENST00000401783.6	protein_coding	110579013,110549849,110546115,110513948,110512926,110503038,110499041,110496815,110489650,110483586,110482361,110481242,110479635,110476204,110472159,110471364,110468940,110465865,110458952,110458471,110457256,110455590,110451289,110450059,110446900,110445837,110443538,110436380,110435241,110434336,110432462,110431915,110430274,110429920,110429143,110427591,110411063,110406160,110404327,110400854,110389524,110387285,110385898,110379347,110377271,110375368,110369923,110365251	110579880,110550104,110546291,110514106,110513105,110503217,110499238,110496933,110489779,110483693,110482492,110481436,110479756,110476315,110472323,110471597,110469101,110466026,110459113,110458562,110457352,110455703,110451402,110450260,110447057,110446038,110443720,110436506,110435364,110434506,110432635,110432034,110430450,110430004,110429334,110427758,110411735,110408951,110404552,110401009,110389587,110387458,110386074,110379517,110377366,110375463,110370016,110366560	Gene ID= ENSG00000165124.17 TPM= 21.02 Transcript Type= protein_coding
chr9	110579018	110581378	110579018	110581378	+	transcript2774.chr9.nnic@NA	transcript2774.chr9.nnic	NA	110579018	110581378	Gene ID= novel_gene_chr9_2775 TPM= 5.84 Transcript Type= NA
chr9	110873263	111038590	110873263	111038590	-	transcript2777.chr9.nnic@LPAR1	transcript2777.chr9.nnic	protein_coding	111038167,111036122,110973481,110972073,110945374,110941421,110873263	111038590,111036201,110973558,110972220,110945401,110942168,110875722	Gene ID= ENSG00000198121.13 TPM= 5.84 Transcript Type= NA
chr9	110873263	111038564	110873263	111038564	-	transcript2784.chr9.nic@LPAR1	transcript2784.chr9.nic	protein_coding	111038167,110973481,110972073,110941421,110873263	111038564,110973558,110972220,110942168,110875722	Gene ID= ENSG00000198121.13 TPM= 16.73 Transcript Type= NA
chr9	110873263	111038857	110873263	111038857	-	transcript2785.chr9.nnic@LPAR1	transcript2785.chr9.nnic	protein_coding	111038652,110973481,110972073,110941421,110873263	111038857,110973558,110972220,110942168,110875722	Gene ID= ENSG00000198121.13 TPM= 5.84 Transcript Type= NA
chr9	110873263	111038307	110873263	111038307	-	transcript2794.chr9.nnic@LPAR1	transcript2794.chr9.nnic	protein_coding	111038167,110972073,110941421,110873263	111038307,110972220,110942168,110875722	Gene ID= ENSG00000198121.13 TPM= 4.67 Transcript Type= NA
chr9	111361891	111484242	111361891	111484242	-	transcript2799.chr9.nnic@KIAA0368	transcript2799.chr9.nnic	protein_coding	111484116,111472897,111451425,111444378,111442306,111440372,111436940,111433233,111430547,111428042,111425743,111425418,111423199,111422134,111421921,111420017,111417883,111416272,111414429,111413895,111412014,111410980,111410041,111408571,111397030,111394160,111393680,111392768,111391756,111389984,111389556,111386377,111385337,111384522,111383211,111378580,111376476,111375113,111373972,111373315,111373170,111372429,111371621,111370722,111370435,111369035,111366522,111366239,111363588,111361891	111484242,111473000,111451555,111444494,111442424,111440521,111437108,111433372,111430628,111428161,111425828,111425496,111423248,111422200,111422043,111420120,111418006,111416352,111414651,111413986,111412148,111411142,111410213,111408672,111397153,111394305,111393734,111392882,111391824,111390101,111389723,111386456,111385442,111384569,111383332,111378730,111376541,111375202,111374038,111373406,111373236,111372620,111371829,111370765,111370627,111369173,111366627,111366327,111363659,111362169	Gene ID= ENSG00000136813.14 TPM= 2.34 Transcript Type= NA
chr9	111361891	111483977	111361891	111483977	-	transcript2804.chr9.nic@KIAA0368	transcript2804.chr9.nic	protein_coding	111483504,111451425,111444378,111442306,111440372,111436940,111433233,111430547,111428042,111425743,111425418,111423199,111422134,111421921,111420017,111417883,111416272,111414429,111413895,111412014,111410980,111410041,111408571,111397030,111394160,111393680,111392768,111391756,111389984,111389556,111386377,111385337,111384522,111383211,111378580,111376476,111375113,111373972,111373315,111373170,111372429,111371621,111370722,111370435,111369035,111366522,111366239,111363588,111361891	111483977,111451555,111444494,111442424,111440521,111437108,111433372,111430628,111428161,111425828,111425496,111423248,111422200,111422043,111420120,111418006,111416352,111414651,111413986,111412148,111411142,111410213,111408672,111397153,111394305,111393734,111392882,111391824,111390101,111389723,111386456,111385442,111384569,111383332,111378730,111376541,111375202,111374038,111373406,111373236,111372620,111371829,111370765,111370627,111369173,111366627,111366327,111363659,111362169	Gene ID= ENSG00000136813.14 TPM= 18.68 Transcript Type= NA
chr9	111360693	111484745	111360693	111484745	-	ENST00000259335.8@KIAA0368	ENST00000259335.8	protein_coding	111484662,111484354,111483985,111451425,111444378,111442306,111440372,111436940,111433233,111430547,111428042,111425743,111425418,111423199,111422134,111421921,111420017,111417883,111416272,111414429,111413895,111412014,111410980,111410041,111408571,111397030,111394160,111393680,111392768,111391756,111389984,111389556,111386377,111385337,111384522,111383211,111378580,111376476,111375113,111373972,111373315,111373170,111372429,111371621,111370722,111370435,111369035,111366522,111366239,111363588,111360693	111484745,111484548,111484261,111451555,111444494,111442424,111440521,111437108,111433372,111430628,111428161,111425828,111425496,111423248,111422200,111422043,111420120,111418006,111416352,111414651,111413986,111412148,111411142,111410213,111408672,111397153,111394305,111393734,111392882,111391824,111390101,111389723,111386456,111385442,111384569,111383332,111378730,111376541,111375202,111374038,111373406,111373236,111372620,111371829,111370765,111370627,111369173,111366627,111366327,111363659,111362169	Gene ID= ENSG00000136813.14 TPM= 3.5 Transcript Type= protein_coding
chr9	111562967	111599389	111562967	111599389	-	transcript2817.chr9.nnic@PTGR1	transcript2817.chr9.nnic	protein_coding	111599255,111597317,111594222,111592926,111585998,111583472,111578796,111574734,111570091,111562967	111599389,111597432,111594267,111592982,111586165,111583589,111578951,111574842,111570209,111563231	Gene ID= ENSG00000106853.18 TPM= 3.12 Transcript Type= NA
chr9	111562967	111599855	111562967	111599855	-	ENST00000407693.6@PTGR1	ENST00000407693.6	protein_coding	111599603,111597317,111594222,111592926,111585998,111583472,111578796,111574734,111570091,111562967	111599855,111597432,111594267,111592982,111586165,111583589,111578951,111574842,111570209,111563231	Gene ID= ENSG00000106853.18 TPM= 5.45 Transcript Type= protein_coding
chr9	111562967	111599407	111562967	111599407	-	ENST00000309195.9@PTGR1	ENST00000309195.9	protein_coding	111599339,111597317,111594222,111592926,111585998,111583472,111578796,111574734,111570091,111562967	111599407,111597432,111594267,111592982,111586165,111583589,111578951,111574842,111570209,111563231	Gene ID= ENSG00000106853.18 TPM= 15.96 Transcript Type= protein_coding
chr9	111631352	111654351	111631352	111654351	+	ENST00000313525.3@DNAJC25	ENST00000313525.3	protein_coding	111631352,111647107,111649453,111653100	111631743,111647259,111649923,111654351	Gene ID= ENSG00000059769.19 TPM= 3.5 Transcript Type= protein_coding
chr9	111631360	111654351	111631360	111654351	+	ENST00000447096.1@DNAJC25	ENST00000447096.1	protein_coding	111631360,111642857,111647107,111649453,111653100	111631743,111643094,111647259,111649923,111654351	Gene ID= ENSG00000059769.19 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr9	111661388	111670229	111661388	111670229	+	transcript2834.chr9.nic@DNAJC25-GNG10	transcript2834.chr9.nic	protein_coding	111661388,111666815,111669272	111661715,111666946,111670229	Gene ID= ENSG00000244115.1 TPM= 22.18 Transcript Type= NA
chr9	111661335	111670246	111661335	111670246	+	ENST00000374293.4@GNG10	ENST00000374293.4	protein_coding	111661335,111666815,111669269	111661715,111666946,111670246	Gene ID= ENSG00000242616.3 TPM= 57.21 Transcript Type= protein_coding
chr9	111896766	111935369	111896766	111935369	+	ENST00000374279.3@UGCG	ENST00000374279.3	protein_coding	111896766,111914605,111922849,111924777,111926384,111929500,111931271,111932170,111932827	111897313,111914746,111922951,111924878,111926496,111929678,111931357,111932359,111935369	Gene ID= ENSG00000148154.9 TPM= 99.25 Transcript Type= protein_coding
chr9	111921804	111926353	111921804	111926353	-	transcript2846.chr9.nnic@NA	transcript2846.chr9.nnic	NA	111921804	111926353	Gene ID= novel_gene_chr9_2847 TPM= 7.01 Transcript Type= NA
chr9	112040785	112175408	112040785	112175408	-	ENST00000374270.7@SUSD1	ENST00000374270.7	protein_coding	112175133,112157500,112149244,112143471,112142320,112124257,112112771,112111654,112102176,112098470,112080074,112078538,112062937,112058428,112052399,112041867,112040785	112175408,112157613,112149399,112143623,112142499,112124436,112112868,112111840,112102285,112098662,112080165,112078724,112063033,112058686,112052438,112041960,112041492	Gene ID= ENSG00000106868.16 TPM= 26.85 Transcript Type= protein_coding
chr9	112040785	112175297	112040785	112175297	-	ENST00000374263.7@SUSD1	ENST00000374263.7	protein_coding	112175133,112157500,112149244,112143471,112142320,112124257,112112771,112111654,112102176,112098470,112080074,112078538,112062937,112058428,112041867,112040785	112175297,112157613,112149399,112143623,112142499,112124436,112112868,112111840,112102285,112098662,112080165,112078724,112063033,112058686,112041960,112041492	Gene ID= ENSG00000106868.16 TPM= 1.17 Transcript Type= protein_coding
chr9	112379937	112472410	112379937	112472410	+	ENST00000398805.7@HSDL2	ENST00000398805.7	protein_coding	112379937,112403995,112405624,112408907,112416841,112418860,112438431,112441699,112454013,112459449,112470432	112380180,112404158,112405722,112409021,112416944,112418958,112438625,112441770,112454162,112459577,112472410	Gene ID= ENSG00000119471.14 TPM= 94.87 Transcript Type= protein_coding
chr9	112380073	112472405	112380073	112472405	+	transcript2880.chr9.nnic@HSDL2	transcript2880.chr9.nnic	protein_coding	112380073,112403995,112405624,112408907,112416841,112418860,112441699,112454013,112459449,112470432	112380180,112404158,112405722,112409021,112416944,112418958,112441770,112454162,112459577,112472405	Gene ID= ENSG00000119471.14 TPM= 3.79 Transcript Type= NA
chr9	112380079	112472405	112380079	112472405	+	transcript2883.chr9.nic@HSDL2	transcript2883.chr9.nic	protein_coding	112380079,112405624,112408907,112418860,112438431,112441699,112454013,112459449,112470432	112380180,112405722,112409021,112418958,112438625,112441770,112454162,112459577,112472405	Gene ID= ENSG00000119471.14 TPM= 3.79 Transcript Type= NA
chr9	112486847	112669397	112486847	112669397	+	ENST00000337530.10@KIAA1958	ENST00000337530.10	protein_coding	112486847,112574057,112645650,112659263	112487118,112575251,112645822,112669397	Gene ID= ENSG00000165185.14 TPM= 1.17 Transcript Type= protein_coding
chr9	112683926	112718236	112683926	112718236	-	ENST00000374242.8@INIP	ENST00000374242.8	protein_coding	112717987,112716461,112694131,112689527,112683926	112718236,112716541,112694233,112689617,112687633	Gene ID= ENSG00000148153.13 TPM= 9.34 Transcript Type= protein_coding
chr9	112750838	112874987	112750838	112874987	+	ENST00000374232.7@SNX30	ENST00000374232.7	protein_coding	112750838,112804776,112817705,112830725,112836214,112838498,112850859,112864247,112868784	112751157,112804967,112817815,112830883,112836409,112838697,112850945,112864399,112874987	Gene ID= ENSG00000148158.16 TPM= 66.55 Transcript Type= protein_coding
chr9	112819268	112823523	112819268	112823523	-	transcript2912.chr9.nnic@NA	transcript2912.chr9.nnic	NA	112819268	112823523	Gene ID= novel_gene_chr9_2913 TPM= 10.51 Transcript Type= NA
chr9	112879257	112890630	112879257	112890630	-	transcript2910.chr9.nnic@SLC46A2	transcript2910.chr9.nnic	protein_coding	112890304,112887330,112886460,112879257	112890630,112887413,112886616,112879819	Gene ID= ENSG00000119457.7 TPM= 2.34 Transcript Type= NA
chr9	112878920	112890913	112878920	112890913	-	ENST00000374228.4@SLC46A2	ENST00000374228.4	protein_coding	112889553,112887330,112886460,112878920	112890913,112887413,112886616,112879819	Gene ID= ENSG00000119457.7 TPM= 12.84 Transcript Type= protein_coding
chr9	112879257	112890810	112879257	112890810	-	ENST00000491462.2@SLC46A2	ENST00000491462.2	protein_coding	112889725,112887330,112886460,112879257	112890810,112887413,112886616,112879819	Gene ID= ENSG00000119457.7 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr9	112997120	113012227	112997120	113012227	-	ENST00000638622.1@ZNF883	ENST00000638622.1	protein_coding	113012150,113011141,113001994,112999665,112997120	113012227,113011227,113002073,112999814,112999138	Gene ID= ENSG00000228623.5 TPM= 1.17 Transcript Type= processed_transcript
chr9	113038380	113056716	113038380	113056716	-	ENST00000374227.7@ZFP37	ENST00000374227.7	protein_coding	113056557,113049791,113049362,113038380	113056716,113049872,113049496,113044268	Gene ID= ENSG00000136866.13 TPM= 1.17 Transcript Type= protein_coding
chr9	113150942	113164137	113150942	113164137	+	ENST00000259392.7@SLC31A2	ENST00000259392.7	protein_coding	113150942,113157727,113161509,113162749	113151080,113157793,113161698,113164137	Gene ID= ENSG00000136867.10 TPM= 159.96 Transcript Type= protein_coding
chr9	113153121	113156418	113153121	113156418	-	transcript2932.chr9.nnic@NA	transcript2932.chr9.nnic	NA	113153121	113156418	Gene ID= novel_gene_chr9_2933 TPM= 15.18 Transcript Type= NA
chr9	113165520	113221361	113165520	113221361	-	ENST00000238256.7@FKBP15	ENST00000238256.7	protein_coding	113221191,113211477,113207212,113206509,113202961,113202531,113199814,113198855,113196932,113194027,113193492,113190471,113188389,113187793,113186249,113184695,113184292,113183751,113182766,113178630,113176537,113174428,113173453,113171581,113170522,113169224,113168460,113165520	113221361,113211592,113207296,113206578,113203035,113202629,113199963,113198923,113197078,113194169,113193549,113190578,113188491,113187899,113186363,113184804,113184399,113183845,113182868,113178801,113176673,113174583,113173605,113171706,113170629,113169942,113168556,113166155	Gene ID= ENSG00000119321.8 TPM= 21.89 Transcript Type= protein_coding
chr9	113165518	113188047	113165518	113188047	-	transcript2921.chr9.nnic@FKBP15	transcript2921.chr9.nnic	protein_coding	113187793,113186249,113184695,113184292,113183751,113182766,113178630,113176537,113174428,113173453,113171581,113170522,113169224,113168460,113165963,113165518	113188047,113186363,113184804,113184399,113183845,113182868,113178801,113176673,113174583,113173605,113171706,113170629,113169942,113168556,113166155,113165920	Gene ID= ENSG00000119321.8 TPM= 7.88 Transcript Type= NA
chr9	113165520	113188560	113165520	113188560	-	transcript2922.chr9.nic@FKBP15	transcript2922.chr9.nic	protein_coding	113188389,113187793,113186249,113184695,113184292,113183751,113182766,113178630,113176537,113174428,113173453,113171581,113170522,113169224,113168460,113165520	113188560,113187899,113186363,113184804,113184399,113183845,113182868,113178801,113176673,113174583,113173605,113171706,113170629,113169942,113168556,113166155	Gene ID= ENSG00000119321.8 TPM= 16.05 Transcript Type= NA
chr9	113165520	113188047	113165520	113188047	-	transcript2924.chr9.nic@FKBP15	transcript2924.chr9.nic	protein_coding	113187793,113186249,113184695,113184292,113183751,113182766,113178630,113176537,113174428,113173453,113171581,113170522,113169224,113168460,113165520	113188047,113186363,113184804,113184399,113183845,113182868,113178801,113176673,113174583,113173605,113171706,113170629,113169942,113168556,113166155	Gene ID= ENSG00000119321.8 TPM= 24.23 Transcript Type= NA
chr9	113189327	113221356	113189327	113221356	-	transcript2925.chr9.nic@FKBP15	transcript2925.chr9.nic	protein_coding	113221191,113211477,113207212,113206509,113202961,113202531,113199814,113198855,113196932,113194027,113193492,113189327	113221356,113211592,113207296,113206578,113203035,113202629,113199963,113198923,113197078,113194169,113193549,113190578	Gene ID= ENSG00000119321.8 TPM= 3.5 Transcript Type= NA
chr9	113221562	113264492	113221562	113264492	+	ENST00000374212.4@SLC31A1	ENST00000374212.4	protein_coding	113221562,113256114,113257113,113258694,113260272	113221678,113256277,113257185,113258862,113264492	Gene ID= ENSG00000136868.10 TPM= 31.53 Transcript Type= protein_coding
chr9	113221587	113227660	113221587	113227660	+	ENST00000496650.1@SLC31A1	ENST00000496650.1	protein_coding	113221587,113227278	113221678,113227660	Gene ID= ENSG00000136868.10 TPM= 1.17 Transcript Type= processed_transcript
chr9	113267008	113275589	113267008	113275589	-	ENST00000374206.3@CDC26	ENST00000374206.3	protein_coding	113275382,113273329,113272427,113267008	113275589,113273438,113272548,113267439	Gene ID= ENSG00000176386.8 TPM= 38.53 Transcript Type= protein_coding
chr9	113275343	113292905	113275343	113292905	+	ENST00000374199.8@PRPF4	ENST00000374199.8	protein_coding	113275343,113276548,113278945,113282646,113283132,113283389,113284295,113286232,113286705,113288175,113290466,113290700,113290898,113291467	113275770,113276725,113279131,113282733,113283211,113283482,113284389,113286290,113286828,113288264,113290588,113290807,113291016,113292905	Gene ID= ENSG00000136875.12 TPM= 6.42 Transcript Type= protein_coding
chr9	113275642	113292776	113275642	113292776	+	ENST00000374198.4@PRPF4	ENST00000374198.4	protein_coding	113275642,113276545,113278945,113282646,113283132,113283389,113284295,113286232,113286705,113288175,113290466,113290700,113290898,113291467	113275770,113276725,113279131,113282733,113283211,113283482,113284389,113286290,113286828,113288264,113290588,113290807,113291016,113292776	Gene ID= ENSG00000136875.12 TPM= 12.84 Transcript Type= protein_coding
chr9	113349541	113371233	113349541	113371233	+	ENST00000374183.4@BSPRY	ENST00000374183.4	protein_coding	113349541,113354240,113360507,113362369,113368259,113369616	113349780,113354338,113360737,113362394,113368383,113371233	Gene ID= ENSG00000119411.10 TPM= 30.94 Transcript Type= protein_coding
chr9	113349538	113368747	113349538	113368747	+	transcript2954.chr9.nic@BSPRY	transcript2954.chr9.nic	protein_coding	113349538,113354240,113360507,113362369,113368259	113349780,113354338,113360737,113362394,113368747	Gene ID= ENSG00000119411.10 TPM= 2.34 Transcript Type= NA
chr9	113349542	113371233	113349542	113371233	+	ENST00000462085.1@BSPRY	ENST00000462085.1	protein_coding	113349542,113354240,113360507,113362369,113369616	113349780,113354338,113360737,113362394,113371233	Gene ID= ENSG00000119411.10 TPM= 7.59 Transcript Type= processed_transcript
chr9	113373419	113376999	113373419	113376999	-	ENST00000374180.3@HDHD3	ENST00000374180.3	protein_coding	113376729,113375453,113373419	113376999,113375567,113374529	Gene ID= ENSG00000119431.9 TPM= 7.01 Transcript Type= protein_coding
chr9	113386317	113401333	113386317	113401333	-	ENST00000409155.7@ALAD	ENST00000409155.7	protein_coding	113401212,113393447,113392119,113391527,113390798,113390593,113390405,113389773,113389599,113389438,113388977,113386317	113401333,113393634,113392169,113391623,113390933,113390676,113390493,113389828,113389686,113389524,113389106,113388361	Gene ID= ENSG00000148218.15 TPM= 93.41 Transcript Type= protein_coding
chr9	113386317	113401326	113386317	113401326	-	transcript2973.chr9.nic@ALAD	transcript2973.chr9.nic	protein_coding	113401212,113393447,113392119,113391527,113390593,113390405,113389773,113389599,113389438,113388977,113386317	113401326,113393634,113392169,113391623,113390933,113390493,113389828,113389686,113389524,113389106,113388361	Gene ID= ENSG00000148218.15 TPM= 7.2 Transcript Type= NA
chr9	113386319	113401243	113386319	113401243	-	ENST00000482847.5@ALAD	ENST00000482847.5	protein_coding	113401212,113393447,113392119,113391527,113390798,113390593,113390405,113389773,113389599,113389438,113388977,113386319	113401243,113393634,113392335,113391623,113390933,113390676,113390493,113389828,113389686,113389524,113389106,113388361	Gene ID= ENSG00000148218.15 TPM= 2.14 Transcript Type= retained_intron
chr9	113501418	113542089	113501418	113542089	+	transcript2983.chr9.nic@RGS3	transcript2983.chr9.nic	protein_coding	113501418,113505442,113506388,113507287,113508541,113514458,113517541,113522930,113529221,113536796,113541320	113501630,113505523,113506493,113507638,113508580,113514654,113517624,113523041,113529264,113536918,113542089	Gene ID= ENSG00000138835.22 TPM= 3.5 Transcript Type= NA
chr9	113580660	113597738	113580660	113597738	+	ENST00000374134.7@RGS3	ENST00000374134.7	protein_coding	113580660,113582072,113583450,113591333,113594430,113594919,113595599,113596768	113581005,113582242,113584427,113591397,113594531,113594980,113595765,113597738	Gene ID= ENSG00000138835.22 TPM= 9.42 Transcript Type= protein_coding
chr9	113564952	113597738	113564952	113597738	+	transcript2991.chr9.nic@RGS3	transcript2991.chr9.nic	protein_coding	113564952,113583450,113591333,113594430,113594919,113595599,113596768	113565360,113584427,113591397,113594531,113594980,113595765,113597738	Gene ID= ENSG00000138835.22 TPM= 4.17 Transcript Type= NA
chr9	113565432	113597738	113565432	113597738	+	transcript2992.chr9.nnic@RGS3	transcript2992.chr9.nnic	protein_coding	113565432,113583450,113591333,113594430,113594919,113595599,113596768	113565730,113584427,113591397,113594531,113594980,113595765,113597738	Gene ID= ENSG00000138835.22 TPM= 13.51 Transcript Type= NA
chr9	113580857	113597738	113580857	113597738	+	transcript2994.chr9.nnic@RGS3	transcript2994.chr9.nnic	protein_coding	113580857,113583450,113591333,113594430,113594919,113595599,113596768	113581005,113584427,113591397,113594531,113594980,113595765,113597738	Gene ID= ENSG00000138835.22 TPM= 8.84 Transcript Type= NA
chr9	113580880	113597738	113580880	113597738	+	transcript2995.chr9.nic@RGS3	transcript2995.chr9.nic	protein_coding	113580880,113583450,113591333,113594430,113594919,113595599,113596768	113582242,113584427,113591397,113594531,113594980,113595765,113597738	Gene ID= ENSG00000138835.22 TPM= 8.25 Transcript Type= NA
chr9	113594129	113597729	113594129	113597729	+	ENST00000620489.1@RGS3	ENST00000620489.1	protein_coding	113594129,113594430,113594919,113595599,113596768	113594338,113594531,113594980,113595765,113597729	Gene ID= ENSG00000138835.22 TPM= 20.05 Transcript Type= protein_coding
chr9	113544301	113546447	113544301	113546447	-	transcript3006.chr9.nnic@NA	transcript3006.chr9.nnic	NA	113544301	113546447	Gene ID= novel_gene_chr9_3007 TPM= 14.01 Transcript Type= NA
chr9	113545932	113549768	113545932	113549768	+	transcript3004.chr9.nnic@NA	transcript3004.chr9.nnic	NA	113545932	113549768	Gene ID= novel_gene_chr9_3005 TPM= 14.01 Transcript Type= NA
chr9	113876270	114050157	113876270	114050157	+	transcript3009.chr9.nic@ZNF618	transcript3009.chr9.nic	protein_coding	113876270,113969117,113988321,114001996,114002624,114007350,114008344,114008477,114016113,114016695,114028733,114032645,114036300,114047893,114048651	113876413,113969160,113988580,114002073,114002662,114007439,114008379,114008554,114016172,114016784,114028972,114032728,114036377,114047994,114050157	Gene ID= ENSG00000157657.14 TPM= 2.92 Transcript Type= NA
chr9	113876270	114050157	113876270	114050157	+	transcript3012.chr9.nic@ZNF618	transcript3012.chr9.nic	protein_coding	113876270,113969117,113988321,114001996,114002624,114007350,114008344,114008477,114016695,114032648,114036300,114047893,114048651	113876413,113969160,113988580,114002073,114002662,114007439,114008379,114008554,114016784,114032728,114036377,114047994,114050157	Gene ID= ENSG00000157657.14 TPM= 4.09 Transcript Type= NA
chr9	114060127	114078472	114060127	114078472	-	ENST00000265132.7@AMBP	ENST00000265132.7	protein_coding	114078093,114076598,114074960,114074036,114072925,114069699,114062677,114061424,114060925,114060127	114078472,114076740,114075036,114074152,114073026,114069745,114062758,114061591,114061098,114060270	Gene ID= ENSG00000106927.11 TPM= 1.17 Transcript Type= protein_coding
chr9	114155560	114312511	114155560	114312511	+	ENST00000356083.7@COL27A1	ENST00000356083.7	protein_coding	114155560,114162715,114167689,114178291,114183022,114194404,114195959,114205102,114205759,114206252,114209675,114210982,114219791,114222223,114231079,114231822,114235599,114236981,114237662,114240220,114240434,114242187,114243507,114245866,114250615,114252593,114252879,114258541,114264355,114264924,114265066,114265422,114266565,114267504,114269241,114270728,114275661,114282277,114282457,114283709,114284724,114288455,114288702,114288914,114289242,114290058,114290224,114290810,114292103,114300070,114300625,114301072,114301284,114301445,114301682,114302082,114304608,114306520,114307669,114309260,114310549	114156012,114162785,114169463,114178344,114183075,114194457,114196012,114205146,114205812,114206296,114209728,114211026,114219844,114222267,114231132,114231866,114235652,114237034,114237715,114240273,114240487,114242231,114243560,114245910,114250668,114252646,114252932,114258594,114264408,114264968,114265110,114265475,114266618,114267557,114269294,114270781,114275768,114282330,114282564,114283762,114284777,114288511,114288755,114288967,114289295,114290111,114290331,114290917,114292210,114300123,114300687,114301125,114301319,114301462,114301717,114302108,114304673,114306688,114307778,114309478,114312511	Gene ID= ENSG00000196739.14 TPM= 5.84 Transcript Type= protein_coding
chr9	114323056	114326475	114323056	114326475	+	ENST00000259396.8@ORM1	ENST00000259396.8	protein_coding	114323056,114323663,114324018,114324790,114325049,114326292	114323247,114323805,114324088,114324897,114325152,114326475	Gene ID= ENSG00000229314.5 TPM= 7.01 Transcript Type= protein_coding
chr9	114329869	114333252	114329869	114333252	+	ENST00000431067.2@ORM2	ENST00000431067.2	protein_coding	114329869,114330434,114330792,114331567,114331826,114333069	114330018,114330576,114330862,114331674,114331929,114333252	Gene ID= ENSG00000228278.3 TPM= 1.17 Transcript Type= protein_coding
chr9	114330494	114334934	114330494	114334934	-	transcript3021.chr9.nnic@NA	transcript3021.chr9.nnic	NA	114330494	114334934	Gene ID= novel_gene_chr9_3022 TPM= 2.34 Transcript Type= NA
chr9	114587746	114598373	114587746	114598373	+	ENST00000374050.3@ATP6V1G1	ENST00000374050.3	protein_coding	114587746,114592552,114597570	114587920,114592652,114598373	Gene ID= ENSG00000136888.6 TPM= 212.5 Transcript Type= protein_coding
chr9	114611206	114646422	114611206	114646422	+	ENST00000374049.4@TMEM268	ENST00000374049.4	protein_coding	114611206,114617118,114624350,114626896,114628101,114633768,114636990,114638544,114643134	114611564,114617301,114624459,114627006,114628250,114633878,114637070,114638726,114646422	Gene ID= ENSG00000157693.14 TPM= 3.5 Transcript Type= protein_coding
chr9	114611271	114631306	114611271	114631306	+	transcript3035.chr9.nic@TMEM268	transcript3035.chr9.nic	protein_coding	114611271,114617118,114624350,114626899,114628101	114611564,114617301,114624459,114627006,114631306	Gene ID= ENSG00000157693.14 TPM= 2.34 Transcript Type= NA
chr9	115020534	115118257	115020534	115118257	-	ENST00000350763.8@TNC	ENST00000350763.8	protein_coding	115117982,115090562,115085864,115084209,115082692,115081772,115077943,115076390,115076032,115073603,115064647,115063796,115062917,115059730,115057153,115048260,115046410,115042219,115040941,115038261,115036098,115035204,115031553,115030254,115029360,115026534,115023973,115020534	115118257,115091154,115087273,115084472,115082807,115081928,115078212,115076575,115076121,115073866,115064919,115064068,115063189,115060002,115057425,115048532,115046682,115042341,115041084,115038380,115036241,115035334,115031685,115030405,115029456,115026695,115024136,115021267	Gene ID= ENSG00000041982.15 TPM= 8.17 Transcript Type= protein_coding
chr9	115020534	115118237	115020534	115118237	-	transcript3040.chr9.nic@TNC	transcript3040.chr9.nic	protein_coding	115117982,115090562,115085864,115084209,115082692,115081772,115077943,115076390,115076032,115073603,115042219,115040941,115038261,115036098,115035204,115031553,115030254,115029360,115026534,115023973,115020534	115118237,115091154,115087273,115084472,115082807,115081928,115078212,115076575,115076121,115073866,115042341,115041084,115038380,115036241,115035334,115031685,115030405,115029456,115026695,115024136,115021267	Gene ID= ENSG00000041982.15 TPM= 72.39 Transcript Type= NA
chr9	116424594	116687250	116424594	116687250	-	transcript3042.chr9.nic@ASTN2	transcript3042.chr9.nic	protein_coding	116687066,116651528,116620310,116618324,116487359,116442453,116440609,116424594	116687250,116651793,116620443,116618472,116487500,116442553,116440792,116426088	Gene ID= ENSG00000148219.16 TPM= 3.5 Transcript Type= NA
chr9	116687302	116701298	116687302	116701298	+	ENST00000450136.1@TRIM32	ENST00000450136.1	protein_coding	116687302,116697662	116687381,116701298	Gene ID= ENSG00000119401.10 TPM= 6.42 Transcript Type= protein_coding
chr9	116694629	116699874	116694629	116699874	-	transcript3048.chr9.nnic@NA	transcript3048.chr9.nnic	NA	116694629	116699874	Gene ID= novel_gene_chr9_3049 TPM= 7.59 Transcript Type= NA
chr9	116701882	116702041	116701882	116702041	-	transcript3050.chr9.nnic@NA	transcript3050.chr9.nnic	NA	116701882	116702041	Gene ID= novel_gene_chr9_3051 TPM= 3.5 Transcript Type= NA
chr9	117704332	117715775	117704332	117715775	+	ENST00000394487.4@TLR4	ENST00000394487.4	protein_coding	117704332,117708199,117708563,117712389	117704565,117708318,117708729,117715775	Gene ID= ENSG00000136869.13 TPM= 2.92 Transcript Type= protein_coding
chr9	117704372	117716871	117704372	117716871	+	ENST00000355622.6@TLR4	ENST00000355622.6	protein_coding	117704372,117708563,117712389	117704565,117708729,117716871	Gene ID= ENSG00000136869.13 TPM= 14.59 Transcript Type= protein_coding
chr9	117704389	117714952	117704389	117714952	+	ENST00000472304.1@TLR4	ENST00000472304.1	protein_coding	117704389,117712389	117704565,117714952	Gene ID= ENSG00000136869.13 TPM= 1.17 Transcript Type= processed_transcript
chr9	119166630	119369467	119166630	119369467	-	ENST00000265922.7@BRINP1	ENST00000265922.7	protein_coding	119369056,119313138,119248960,119242047,119238655,119213919,119208719,119166630	119369467,119313405,119249150,119242216,119238760,119214155,119208941,119168224	Gene ID= ENSG00000078725.12 TPM= 2.34 Transcript Type= protein_coding
chr9	120490657	120580172	120490657	120580172	-	transcript3076.chr9.nic@CDK5RAP2	transcript3076.chr9.nic	protein_coding	120579920,120571974,120568321,120550792,120545714,120539041,120536372,120529978,120528744,120527806,120524986,120518427,120490657	120580172,120572041,120568388,120550902,120545790,120539164,120536526,120530140,120528797,120527925,120525078,120518645,120491477	Gene ID= ENSG00000136861.17 TPM= 3.5 Transcript Type= NA
chr9	120389199	120403452	120389199	120403452	-	ENST00000433194.6@CDK5RAP2	ENST00000433194.6	protein_coding	120403316,120402806,120400742,120394512,120389741,120389199	120403452,120403071,120400885,120394638,120389787,120389292	Gene ID= ENSG00000136861.17 TPM= 1.17 Transcript Type= processed_transcript
chr9	120602011	120603402	120602011	120603402	-	transcript3085.chr9.nnic@NA	transcript3085.chr9.nnic	NA	120602011	120603402	Gene ID= novel_gene_chr9_3086 TPM= 2.34 Transcript Type= NA
chr9	120759197	120793462	120759197	120793462	-	transcript3088.chr9.nnic@FBXW2	transcript3088.chr9.nnic	protein_coding	120793360,120793149,120787769,120778351,120776093,120772754,120771348,120759197	120793462,120793257,120788278,120778545,120776226,120772840,120771517,120764847	Gene ID= ENSG00000119402.16 TPM= 5.84 Transcript Type= NA
chr9	120764175	120793462	120764175	120793462	-	transcript3090.chr9.nic@FBXW2	transcript3090.chr9.nic	protein_coding	120793354,120793149,120787769,120778351,120776093,120772754,120771348,120764175	120793462,120793257,120788186,120778545,120776226,120772840,120771517,120764847	Gene ID= ENSG00000119402.16 TPM= 4.29 Transcript Type= NA
chr9	120764175	120793362	120764175	120793362	-	transcript3097.chr9.nic@FBXW2	transcript3097.chr9.nic	protein_coding	120793149,120787769,120778351,120776093,120772754,120771348,120764175	120793362,120788278,120778545,120776226,120772840,120771517,120764847	Gene ID= ENSG00000119402.16 TPM= 8.96 Transcript Type= NA
chr9	120756974	120793412	120756974	120793412	-	ENST00000608872.5@FBXW2	ENST00000608872.5	protein_coding	120793354,120793149,120787769,120778351,120776093,120772754,120771348,120756974	120793412,120793257,120788278,120778545,120776226,120772840,120771517,120764847	Gene ID= ENSG00000119402.16 TPM= 15.18 Transcript Type= protein_coding
chr9	120775237	120778273	120775237	120778273	+	transcript3101.chr9.nnic@NA	transcript3101.chr9.nnic	NA	120775237	120778273	Gene ID= novel_gene_chr9_3102 TPM= 3.5 Transcript Type= NA
chr9	120816053	120842984	120816053	120842984	-	ENST00000210313.7@PSMD5	ENST00000210313.7	protein_coding	120842737,120833312,120831832,120831331,120829099,120826765,120824494,120821355,120820839,120816053	120842984,120833456,120831945,120831459,120829208,120826907,120824685,120821464,120820979,120818163	Gene ID= ENSG00000095261.13 TPM= 26.85 Transcript Type= protein_coding
chr9	120843084	120843636	120843084	120843636	+	transcript3122.chr9.nnic@NA	transcript3122.chr9.nnic	NA	120843084	120843636	Gene ID= novel_gene_chr9_3123 TPM= 8.17 Transcript Type= NA
chr9	120855699	120877328	120855699	120877328	-	ENST00000373896.7@PHF19	ENST00000373896.7	protein_coding	120877091,120874556,120873979,120870443,120869845,120869182,120866870,120866028,120865710,120864049,120862588,120861918,120861089,120860090,120855699	120877328,120874756,120874060,120870538,120869945,120869330,120866965,120866096,120865830,120864116,120862749,120862005,120861174,120860185,120858286	Gene ID= ENSG00000119403.13 TPM= 8.17 Transcript Type= protein_coding
chr9	120855652	120868911	120855652	120868911	-	ENST00000419155.5@PHF19	ENST00000419155.5	protein_coding	120868808,120866870,120866028,120865710,120864049,120862588,120861918,120861089,120860090,120855652	120868911,120866965,120866096,120865830,120864116,120862749,120862005,120861174,120860185,120858286	Gene ID= ENSG00000119403.13 TPM= 4.67 Transcript Type= protein_coding
chr9	120999677	121050308	120999677	121050308	-	transcript3139.chr9.nic@C5	transcript3139.chr9.nic	protein_coding	121050182,121046191,121043004,121037881,121034803,121032113,121030397,121027160,121025454,121023404,121021509,121019976,121017643,121017362,121016254,121015199,121013873,121008408,121006904,121005919,120999677	121050308,121046383,121043166,121037951,121034894,121032195,121030487,121027274,121025580,121023519,121021694,121020179,121017852,121017511,121016383,121015261,121014070,121008498,121006977,121006058,121000051	Gene ID= ENSG00000106804.7 TPM= 2.34 Transcript Type= NA
chr9	120952335	121050276	120952335	121050276	-	ENST00000223642.2@C5	ENST00000223642.2	protein_coding	121050182,121046191,121043004,121037881,121034803,121032113,121030397,121027160,121025454,121023404,121021509,121019976,121017643,121017362,121016254,121015199,121013873,121008408,121006904,121005919,120997547,120996240,120991191,120989568,120989046,120982655,120981844,120980083,120976700,120974779,120971930,120970170,120969061,120963636,120962893,120962671,120961482,120960248,120957285,120953730,120952335	121050276,121046383,121043166,121037951,121034894,121032195,121030487,121027274,121025580,121023519,121021694,121020179,121017852,121017511,121016383,121015261,121014070,121008498,121006977,121006058,120997774,120996300,120991280,120989780,120989121,120982814,120981939,120980254,120976905,120974931,120971992,120970251,120969118,120963738,120962967,120962776,120961565,120960337,120957368,120953868,120952868	Gene ID= ENSG00000106804.7 TPM= 10.51 Transcript Type= protein_coding
chr9	121178137	121201869	121178137	121201869	-	ENST00000373840.8@RAB14	ENST00000373840.8	protein_coding	121201639,121193361,121192171,121190554,121186953,121183311,121182930,121178137	121201869,121193419,121192224,121190731,121187019,121183398,121182960,121181573	Gene ID= ENSG00000119396.10 TPM= 12.84 Transcript Type= protein_coding
chr9	121267771	121332842	121267771	121332842	+	transcript3174.chr9.nic@GSN	transcript3174.chr9.nic	protein_coding	121267771,121281470,121301963,121302911,121310684,121312339,121313934,121317086,121318406,121318665,121321268,121324554,121326512,121327308,121328891,121329238,121331388,121332434	121268219,121281562,121302167,121303065,121310845,121312488,121314023,121317218,121318494,121318880,121321401,121324644,121326682,121327482,121329015,121329315,121331448,121332842	Gene ID= ENSG00000148180.19 TPM= 674.55 Transcript Type= NA
chr9	121299827	121332842	121299827	121332842	+	transcript3217.chr9.nnic@GSN	transcript3217.chr9.nnic	protein_coding	121299827,121301924,121302911,121310684,121312339,121313934,121317086,121318406,121318665,121321268,121324554,121326512,121327308,121328891,121329238,121331388,121332434	121300005,121302167,121303065,121310845,121312488,121314023,121317218,121318494,121318880,121321401,121324644,121326682,121327482,121329015,121329315,121331448,121332842	Gene ID= ENSG00000148180.19 TPM= 118.78 Transcript Type= NA
chr9	121299793	121332842	121299793	121332842	+	ENST00000373818.8@GSN	ENST00000373818.8	protein_coding	121299793,121301963,121302911,121310684,121312339,121313934,121317086,121318406,121318665,121321268,121324554,121326512,121327308,121328891,121329238,121331388,121332434	121300005,121302167,121303065,121310845,121312488,121314023,121317218,121318494,121318880,121321401,121324644,121326682,121327482,121329015,121329315,121331448,121332842	Gene ID= ENSG00000148180.19 TPM= 1654.17 Transcript Type= protein_coding
chr9	121268168	121332843	121268168	121332843	+	ENST00000449733.7@GSN	ENST00000449733.7	protein_coding	121268168,121281470,121282439,121301963,121302911,121310684,121312339,121313934,121317086,121318406,121318665,121321268,121324554,121326512,121327308,121328891,121329238,121331388,121332434	121268219,121281562,121282550,121302167,121303065,121310845,121312488,121314023,121317218,121318494,121318880,121321401,121324644,121326682,121327482,121329015,121329315,121331448,121332843	Gene ID= ENSG00000148180.19 TPM= 79.71 Transcript Type= protein_coding
chr9	121339077	121370205	121339077	121370205	-	ENST00000286713.6@STOM	ENST00000286713.6	protein_coding	121370127,121356053,121354601,121353220,121349120,121348015,121339077	121370205,121356156,121354673,121353302,121349323,121348149,121341408	Gene ID= ENSG00000148175.12 TPM= 1133.73 Transcript Type= protein_coding
chr9	121455041	121499816	121455041	121499816	-	ENST00000373793.3@GGTA1P	ENST00000373793.3	transcribed_unitary_pseudogene	121499650,121479066,121467843,121463293,121461252,121460104,121455041	121499816,121479334,121467931,121463328,121461317,121460219,121455841	Gene ID= ENSG00000204136.10 TPM= 1.17 Transcript Type= processed_transcript
chr9	121455040	121500027	121455040	121500027	-	ENST00000481799.5@GGTA1P	ENST00000481799.5	transcribed_unitary_pseudogene	121499650,121467843,121463293,121461252,121460104,121455040	121500027,121467931,121463328,121461317,121460219,121455841	Gene ID= ENSG00000204136.10 TPM= 17.51 Transcript Type= processed_transcript
chr9	121651594	121785530	121651594	121785530	+	ENST00000408936.7@DAB2IP	ENST00000408936.7	protein_coding	121651594,121678678,121699325,121757013,121758898,121759885,121763505,121763735,121766494,121768432,121770546,121772607,121774260,121776198,121781464,121782331	121651899,121678781,121699458,121757166,121758996,121760439,121763649,121763879,121766730,121768633,121770724,121773495,121774412,121776391,121781551,121785530	Gene ID= ENSG00000136848.16 TPM= 133.11 Transcript Type= protein_coding
chr9	121988910	122093606	121988910	122093606	-	ENST00000373776.4@TTLL11	ENST00000373776.4	protein_coding	122092687,122039272,122031723,121988910	122093606,122039368,122031856,121989770	Gene ID= ENSG00000175764.14 TPM= 3.5 Transcript Type= protein_coding
chr9	122144058	122159819	122144058	122159819	-	ENST00000373768.3@NDUFA8	ENST00000373768.3	protein_coding	122159627,122152245,122148112,122144058	122159819,122152408,122148277,122144378	Gene ID= ENSG00000119421.6 TPM= 60.71 Transcript Type= protein_coding
chr9	122202583	122228956	122202583	122228956	-	transcript3292.chr9.nnic@LHX6	transcript3292.chr9.nnic	protein_coding	122228657,122226848,122226376,122217068,122214283,122213974,122213606,122209614,122202583	122228956,122227030,122226497,122217288,122214383,122214069,122213780,122209717,122204780	Gene ID= ENSG00000106852.15 TPM= 16.93 Transcript Type= NA
chr9	122202583	122228939	122202583	122228939	-	transcript3293.chr9.nic@LHX6	transcript3293.chr9.nic	protein_coding	122228657,122227409,122226848,122226376,122217068,122214283,122213606,122209614,122202583	122228939,122227480,122227030,122226497,122217288,122214383,122214069,122209717,122204780	Gene ID= ENSG00000106852.15 TPM= 9.92 Transcript Type= NA
chr9	122215176	122228956	122215176	122228956	-	transcript3294.chr9.nic@LHX6	transcript3294.chr9.nic	protein_coding	122228657,122227409,122226848,122226376,122215176	122228956,122227480,122227030,122226497,122217288	Gene ID= ENSG00000106852.15 TPM= 4.67 Transcript Type= NA
chr9	122202579	122228845	122202579	122228845	-	ENST00000394319.8@LHX6	ENST00000394319.8	protein_coding	122228657,122227409,122226848,122226376,122217068,122214283,122213974,122213606,122209614,122202579	122228845,122227480,122227030,122226497,122217288,122214383,122214069,122213780,122209717,122204780	Gene ID= ENSG00000106852.15 TPM= 11.68 Transcript Type= protein_coding
chr9	122237624	122264839	122237624	122264839	-	ENST00000417201.3@RBM18	ENST00000417201.3	protein_coding	122264715,122261380,122251847,122247518,122245256,122237624	122264839,122261508,122251973,122247604,122245341,122242043	Gene ID= ENSG00000119446.13 TPM= 1.17 Transcript Type= protein_coding
chr9	122264877	122323461	122264877	122323461	+	transcript3299.chr9.nic@MRRF	transcript3299.chr9.nic	protein_coding	122264877,122270864,122280443,122285169,122286039,122291749,122313227,122322540	122264938,122271075,122280598,122285946,122286166,122291840,122313386,122323461	Gene ID= ENSG00000148187.17 TPM= 3.5 Transcript Type= NA
chr9	122264603	122323461	122264603	122323461	+	ENST00000297908.7@MRRF	ENST00000297908.7	protein_coding	122264603,122270864,122285169,122291749,122313227,122322540	122264938,122271075,122285287,122291840,122313386,122323461	Gene ID= ENSG00000148187.17 TPM= 1.17 Transcript Type= protein_coding
chr9	122264883	122273459	122264883	122273459	+	transcript3323.chr9.nic@MRRF	transcript3323.chr9.nic	protein_coding	122264883,122270864	122264938,122273459	Gene ID= ENSG00000148187.17 TPM= 2.34 Transcript Type= NA
chr9	122264895	122323092	122264895	122323092	+	ENST00000373723.9@MRRF	ENST00000373723.9	protein_coding	122264895,122270864,122280443,122285169,122291749,122322540	122264938,122271075,122280598,122285287,122291840,122323092	Gene ID= ENSG00000148187.17 TPM= 2.34 Transcript Type= protein_coding
chr9	122370985	122393302	122370985	122393302	+	transcript3327.chr9.nic@PTGS1	transcript3327.chr9.nic	protein_coding	122370985,122371186,122371613,122377899,122378433,122378775,122381371,122381664,122383509,122386446,122390198,122392189	122371091,122371272,122371834,122378015,122378573,122378918,122381552,122381747,122383755,122386732,122390345,122393302	Gene ID= ENSG00000095303.14 TPM= 9.34 Transcript Type= NA
chr9	122370530	122395702	122370530	122395702	+	ENST00000540753.5@PTGS1	ENST00000540753.5	protein_coding	122370530,122371186,122371613,122377899,122378433,122378775,122381371,122381664,122383509,122386446,122390198,122392189	122370842,122371272,122371834,122378015,122378573,122378918,122381552,122381747,122383755,122386621,122390345,122395702	Gene ID= ENSG00000095303.14 TPM= 2.34 Transcript Type= protein_coding
chr9	122371080	122395703	122371080	122395703	+	ENST00000362012.6@PTGS1	ENST00000362012.6	protein_coding	122371080,122371186,122377899,122378433,122378775,122381371,122381664,122383509,122386446,122390198,122392189	122371091,122371272,122378015,122378573,122378918,122381552,122381747,122383755,122386732,122390345,122395703	Gene ID= ENSG00000095303.14 TPM= 12.84 Transcript Type= protein_coding
chr9	122816052	122828591	122816052	122828591	-	transcript3343.chr9.nnic@PDCL	transcript3343.chr9.nnic	protein_coding	122828471,122826616,122823016,122817743,122816052	122828591,122826792,122823197,122820636,122817192	Gene ID= ENSG00000136940.13 TPM= 5.84 Transcript Type= NA
chr9	122816052	122828588	122816052	122828588	-	transcript3344.chr9.nnic@PDCL	transcript3344.chr9.nnic	protein_coding	122828471,122826616,122823016,122818168,122816052	122828588,122826792,122823197,122820636,122817196	Gene ID= ENSG00000136940.13 TPM= 3.5 Transcript Type= NA
chr9	122818344	122828610	122818344	122828610	-	transcript3357.chr9.nnic@PDCL	transcript3357.chr9.nnic	protein_coding	122828471,122823016,122818344	122828610,122823197,122820636	Gene ID= ENSG00000136940.13 TPM= 4.67 Transcript Type= NA
chr9	122818344	122828631	122818344	122828631	-	ENST00000259467.8@PDCL	ENST00000259467.8	protein_coding	122828471,122826616,122823016,122818344	122828631,122826792,122823197,122820636	Gene ID= ENSG00000136940.13 TPM= 96.91 Transcript Type= protein_coding
chr9	122849453	122905313	122849453	122905313	-	transcript3361.chr9.nnic@RC3H2	transcript3361.chr9.nnic	protein_coding	122905110,122897279,122892909,122890312,122888616,122883204,122880594,122879993,122879755,122877471,122865349,122859917,122858669,122857923,122855732,122855184,122854531,122854185,122853952,122851323,122851081,122849453	122905313,122897576,122893026,122890545,122888691,122883379,122880794,122880125,122879873,122877583,122865657,122860131,122859102,122858093,122855878,122855397,122854615,122854266,122854086,122851436,122851229,122849822	Gene ID= ENSG00000056586.15 TPM= 2.34 Transcript Type= NA
chr9	122849437	122905510	122849437	122905510	-	transcript3365.chr9.nic@RC3H2	transcript3365.chr9.nic	protein_coding	122905110,122897279,122892909,122890312,122883204,122880594,122879993,122879755,122877471,122865349,122859917,122858669,122857923,122855732,122855184,122854531,122854185,122853952,122851323,122851100,122849437	122905510,122897576,122893026,122890545,122883379,122880794,122880125,122879873,122877583,122865657,122860131,122859102,122858093,122855878,122855397,122854615,122854266,122854086,122851436,122851229,122849822	Gene ID= ENSG00000056586.15 TPM= 5.84 Transcript Type= NA
chr9	122849453	122905345	122849453	122905345	-	transcript3368.chr9.nnic@RC3H2	transcript3368.chr9.nnic	protein_coding	122905110,122897279,122890312,122883204,122880594,122879993,122879755,122877471,122865349,122859917,122858669,122857923,122855732,122855184,122854531,122854185,122853952,122851323,122851081,122849453	122905345,122897576,122890545,122883379,122880794,122880125,122879873,122877583,122865657,122860131,122859102,122858093,122855878,122855397,122854615,122854266,122854086,122851436,122851229,122849822	Gene ID= ENSG00000056586.15 TPM= 2.34 Transcript Type= NA
chr9	122849453	122905352	122849453	122905352	-	transcript3369.chr9.nnic@RC3H2	transcript3369.chr9.nnic	protein_coding	122905110,122897279,122892909,122890312,122883204,122880594,122879993,122879755,122877471,122865349,122859917,122858669,122855732,122855184,122854531,122854185,122853952,122851323,122851081,122849453	122905352,122897576,122893026,122890545,122883379,122880794,122880125,122879873,122877583,122865657,122860131,122859102,122855878,122855397,122854615,122854266,122854086,122851436,122851229,122849822	Gene ID= ENSG00000056586.15 TPM= 5.84 Transcript Type= NA
chr9	122849453	122905328	122849453	122905328	-	transcript3370.chr9.nnic@RC3H2	transcript3370.chr9.nnic	protein_coding	122905110,122897279,122892909,122890312,122883204,122880594,122879993,122879755,122877471,122865349,122859917,122858669,122857923,122855732,122855184,122854531,122854185,122853952,122851081,122849453	122905328,122897576,122893026,122890545,122883379,122880794,122880125,122879873,122877583,122865657,122860131,122859102,122858093,122855878,122855397,122854615,122854266,122854086,122851229,122849822	Gene ID= ENSG00000056586.15 TPM= 2.34 Transcript Type= NA
chr9	122849453	122905283	122849453	122905283	-	ENST00000357244.6@RC3H2	ENST00000357244.6	protein_coding	122905110,122897279,122892909,122890312,122883204,122880594,122879993,122879755,122877471,122865349,122859917,122858669,122857923,122855732,122855184,122854531,122854185,122853952,122851323,122851081,122849453	122905283,122897576,122893026,122890545,122883379,122880794,122880125,122879873,122877583,122865657,122860131,122859102,122858093,122855878,122855397,122854615,122854266,122854086,122851436,122851229,122849822	Gene ID= ENSG00000056586.15 TPM= 23.35 Transcript Type= protein_coding
chr9	122853745	122905341	122853745	122905341	-	ENST00000423239.6@RC3H2	ENST00000423239.6	protein_coding	122905110,122897279,122892909,122890312,122883204,122880594,122879993,122879755,122877471,122865349,122859917,122858669,122857923,122855732,122855184,122854531,122854185,122853745	122905341,122897576,122893026,122890545,122883379,122880794,122880125,122879873,122877583,122865657,122860131,122859102,122858093,122855878,122855397,122854615,122854266,122854086	Gene ID= ENSG00000056586.15 TPM= 3.5 Transcript Type= protein_coding
chr9	122908056	122913330	122908056	122913330	-	ENST00000373659.3@ZBTB6	ENST00000373659.3	protein_coding	122913251,122908056	122913330,122912081	Gene ID= ENSG00000186130.4 TPM= 2.34 Transcript Type= protein_coding
chr9	122915566	122931500	122915566	122931500	-	ENST00000373656.3@ZBTB26	ENST00000373656.3	protein_coding	122931437,122915566	122931500,122919944	Gene ID= ENSG00000171448.8 TPM= 10.51 Transcript Type= protein_coding
chr9	122941009	123104866	122941009	123104866	+	ENST00000373647.8@RABGAP1	ENST00000373647.8	protein_coding	122941009,122957011,122984485,122986215,122989297,122990056,122996041,122996539,122997259,122998597,123010354,123015543,123020309,123065348,123070350,123073552,123074285,123076245,123076634,123089758,123090275,123097741,123098715,123099478,123101566,123103091	122941093,122957209,122984719,122986419,122989471,122990213,122996151,122996605,122997361,122998766,123010528,123015636,123020459,123065461,123070424,123073677,123074428,123076286,123076762,123089850,123090385,123097845,123098798,123099549,123101763,123104866	Gene ID= ENSG00000011454.16 TPM= 21.02 Transcript Type= protein_coding
chr9	122941010	123073452	122941010	123073452	+	transcript3405.chr9.nnic@RABGAP1	transcript3405.chr9.nnic	protein_coding	122941010,122957011,122984485,122986215,122989297,122990056,122996041,122996539,122997259,122998597,123010354,123015543,123020309,123065348,123070350	122941088,122957209,122984719,122986419,122989471,122990213,122996151,122996605,122997361,122998766,123010528,123015636,123020459,123065461,123073452	Gene ID= ENSG00000011454.16 TPM= 2.34 Transcript Type= NA
chr9	122941001	123026527	122941001	123026527	+	transcript3409.chr9.nnic@RABGAP1	transcript3409.chr9.nnic	protein_coding	122941001,122957011,122984485,122986215,122989297,122990056,122996041,122996539,122997259,122998597,123010354,123015543,123020309,123026033	122941093,122957209,122984719,122986419,122989471,122990213,122996151,122996605,122997361,122998766,123010528,123015636,123020459,123026527	Gene ID= ENSG00000011454.16 TPM= 3.5 Transcript Type= NA
chr9	122941020	122990769	122941020	122990769	+	ENST00000317419.7@RABGAP1	ENST00000317419.7	protein_coding	122941020,122957011,122984485,122986215,122989297	122941093,122957209,122984719,122986419,122990769	Gene ID= ENSG00000011454.16 TPM= 2.34 Transcript Type= retained_intron
chr9	122941038	122942686	122941038	122942686	+	transcript3415.chr9.nnic@NA	transcript3415.chr9.nnic	NA	122941038	122942686	Gene ID= novel_gene_chr9_3416 TPM= 4.67 Transcript Type= NA
chr9	122945149	122948916	122945149	122948916	-	transcript3417.chr9.nnic@NA	transcript3417.chr9.nnic	NA	122945149	122948916	Gene ID= novel_gene_chr9_3418 TPM= 12.84 Transcript Type= NA
chr9	123121269	123268617	123121269	123268617	-	transcript3423.chr9.nic@STRBP	transcript3423.chr9.nic	protein_coding	123268436,123184132,123179007,123173677,123169902,123160977,123160367,123159096,123158332,123158012,123147778,123146855,123139529,123136381,123136041,123132845,123128214,123121269	123268617,123184298,123179227,123173842,123170046,123161068,123160462,123159207,123158429,123158123,123147870,123147054,123139687,123136515,123136181,123132968,123128258,123122326	Gene ID= ENSG00000165209.18 TPM= 2.34 Transcript Type= NA
chr9	123124709	123268617	123124709	123268617	-	transcript3424.chr9.nic@STRBP	transcript3424.chr9.nic	protein_coding	123268436,123184132,123179007,123173677,123169902,123160977,123160367,123159096,123158332,123158012,123147778,123146855,123139529,123136381,123136041,123132845,123128214,123124709	123268617,123184298,123179227,123173842,123170046,123161068,123160462,123159207,123158429,123158123,123147870,123147054,123139687,123136515,123136181,123132968,123128258,123125673	Gene ID= ENSG00000165209.18 TPM= 7.01 Transcript Type= NA
chr9	123125220	123268617	123125220	123268617	-	transcript3430.chr9.nnic@STRBP	transcript3430.chr9.nnic	protein_coding	123268436,123184132,123179007,123173677,123169902,123160977,123160367,123159096,123158332,123158012,123147778,123146855,123136381,123136041,123132845,123128214,123125220	123268617,123184298,123179227,123173842,123170046,123161068,123160462,123159207,123158429,123158123,123147870,123147054,123136515,123136181,123132968,123128258,123125673	Gene ID= ENSG00000165209.18 TPM= 2.34 Transcript Type= NA
chr9	123356260	123378753	123356260	123378753	+	ENST00000373631.7@CRB2	ENST00000373631.7	protein_coding	123356260,123362865,123365917,123366227,123367172,123367573,123370108,123371070,123372177,123373134,123374579,123375217,123376838	123356354,123363188,123366112,123366366,123367357,123367686,123370980,123371578,123372342,123373920,123374695,123375343,123378753	Gene ID= ENSG00000148204.11 TPM= 1.17 Transcript Type= protein_coding
chr9	123443885	123447801	123443885	123447801	+	transcript3441.chr9.nnic@NA	transcript3441.chr9.nnic	NA	123443885	123447801	Gene ID= novel_gene_chr9_3442 TPM= 2.34 Transcript Type= NA
chr9	124261375	124352438	124261375	124352438	+	transcript3462.chr9.nic@NEK6	transcript3462.chr9.nic	protein_coding	124261375,124301936,124312509,124313923,124321459,124326330,124327338,124339571,124347709,124350837	124261583,124302054,124312649,124313985,124321569,124326438,124327445,124339665,124347822,124352438	Gene ID= ENSG00000119408.16 TPM= 15.18 Transcript Type= NA
chr9	124257949	124305575	124257949	124305575	+	transcript3475.chr9.nic@NEK6	transcript3475.chr9.nic	protein_coding	124257949,124301936	124258085,124305575	Gene ID= ENSG00000119408.16 TPM= 5.84 Transcript Type= NA
chr9	124258251	124352438	124258251	124352438	+	ENST00000545174.5@NEK6	ENST00000545174.5	protein_coding	124258251,124301936,124312509,124313923,124321459,124326330,124327338,124339571,124347709,124350837	124258361,124302054,124312649,124313985,124321569,124326438,124327445,124339665,124347822,124352438	Gene ID= ENSG00000119408.16 TPM= 12.84 Transcript Type= protein_coding
chr9	124258186	124259865	124258186	124259865	+	transcript3479.chr9.nnic@NA	transcript3479.chr9.nnic	NA	124258186	124259865	Gene ID= novel_gene_chr9_3480 TPM= 3.5 Transcript Type= NA
chr9	124269379	124275173	124269379	124275173	-	transcript3481.chr9.nnic@NA	transcript3481.chr9.nnic	NA	124269379	124275173	Gene ID= novel_gene_chr9_3482 TPM= 10.51 Transcript Type= NA
chr9	124314500	124317668	124314500	124317668	-	transcript3483.chr9.nnic@NA	transcript3483.chr9.nnic	NA	124314500	124317668	Gene ID= novel_gene_chr9_3484 TPM= 5.84 Transcript Type= NA
chr9	124353335	124359184	124353335	124359184	+	transcript3477.chr9.nnic@NA	transcript3477.chr9.nnic	NA	124353335	124359184	Gene ID= novel_gene_chr9_3478 TPM= 95.74 Transcript Type= NA
chr9	124353466	124415439	124353466	124415439	-	ENST00000259457.7@PSMB7	ENST00000259457.7	protein_coding	124415364,124414842,124413908,124412352,124405317,124384598,124356764,124353466	124415439,124414935,124414005,124412492,124405432,124384656,124356915,124353709	Gene ID= ENSG00000136930.12 TPM= 105.08 Transcript Type= protein_coding
chr9	124857884	124861961	124857884	124861961	-	ENST00000348462.5@RPL35	ENST00000348462.5	protein_coding	124861910,124861419,124860183,124857884	124861961,124861555,124860264,124858067	Gene ID= ENSG00000136942.14 TPM= 465.87 Transcript Type= protein_coding
chr9	124862130	124877733	124862130	124877733	+	ENST00000353214.6@ARPC5L	ENST00000353214.6	protein_coding	124862130,124863988,124868428,124873692,124874975,124876878	124862398,124864107,124869439,124873764,124875151,124877733	Gene ID= ENSG00000136950.13 TPM= 23.35 Transcript Type= protein_coding
chr9	124872589	124877401	124872589	124877401	+	ENST00000465124.1@ARPC5L	ENST00000465124.1	protein_coding	124872589,124874975,124876878	124873764,124875151,124877401	Gene ID= ENSG00000136950.13 TPM= 5.84 Transcript Type= processed_transcript
chr9	124878357	124941000	124878357	124941000	-	transcript3494.chr9.nnic@GOLGA1	transcript3494.chr9.nnic	protein_coding	124940840,124940106,124938577,124931316,124929216,124928188,124926709,124923095,124921723,124921129,124911901,124908377,124900452,124899329,124898549,124890389,124889434,124889143,124888253,124882510,124881784,124881171,124878357	124941000,124940155,124938866,124931406,124929290,124928285,124926741,124923223,124921892,124921240,124912026,124908472,124900547,124899478,124898644,124890478,124889536,124889303,124888396,124882569,124881954,124881257,124880610	Gene ID= ENSG00000136935.13 TPM= 2.34 Transcript Type= NA
chr9	124878357	124941099	124878357	124941099	-	ENST00000373555.8@GOLGA1	ENST00000373555.8	protein_coding	124940971,124940106,124938577,124931316,124929216,124928188,124926709,124923095,124921723,124921129,124911901,124908377,124900452,124899329,124898549,124890389,124889434,124889143,124888253,124882510,124881784,124881171,124878357	124941099,124940155,124938866,124931406,124929290,124928285,124926741,124923223,124921892,124921240,124912026,124908472,124900547,124899478,124898644,124890478,124889536,124889303,124888396,124882569,124881954,124881257,124880610	Gene ID= ENSG00000136935.13 TPM= 12.84 Transcript Type= protein_coding
chr9	125146574	125189939	125146574	125189939	-	ENST00000451402.5@PPP6C	ENST00000451402.5	protein_coding	125189562,125188919,125171085,125160841,125158241,125153906,125153533,125146574	125189939,125188947,125171180,125160906,125158382,125153985,125153742,125149921	Gene ID= ENSG00000119414.11 TPM= 1.46 Transcript Type= protein_coding
chr9	125146574	125189939	125146574	125189939	-	ENST00000415905.5@PPP6C	ENST00000415905.5	protein_coding	125189644,125171085,125158241,125153906,125153533,125146574	125189939,125171180,125158382,125153985,125153742,125149921	Gene ID= ENSG00000119414.11 TPM= 1.46 Transcript Type= protein_coding
chr9	125149130	125189788	125149130	125189788	-	transcript3524.chr9.nic@PPP6C	transcript3524.chr9.nic	protein_coding	125189644,125171085,125160841,125158241,125153906,125149130	125189788,125171180,125160906,125158382,125153985,125153742	Gene ID= ENSG00000119414.11 TPM= 2.63 Transcript Type= NA
chr9	125146573	125189818	125146573	125189818	-	ENST00000373547.8@PPP6C	ENST00000373547.8	protein_coding	125189644,125171085,125160841,125158241,125153906,125153533,125146573	125189818,125171180,125160906,125158382,125153985,125153742,125149921	Gene ID= ENSG00000119414.11 TPM= 7.3 Transcript Type= protein_coding
chr9	125200542	125234158	125200542	125234158	+	ENST00000394125.8@RABEPK	ENST00000394125.8	protein_coding	125200542,125200780,125203008,125207564,125213370,125220539,125227910,125232596,125233688	125200577,125200906,125203066,125207721,125213522,125220700,125228059,125232745,125234158	Gene ID= ENSG00000136933.16 TPM= 1.17 Transcript Type= protein_coding
chr9	125234853	125241330	125234853	125241330	-	ENST00000324460.6@HSPA5	ENST00000324460.6	protein_coding	125241005,125240676,125240172,125239421,125238941,125238590,125238141,125234853	125241330,125240907,125240309,125239533,125239331,125238827,125238308,125237154	Gene ID= ENSG00000044574.7 TPM= 14.59 Transcript Type= protein_coding
chr9	125261795	125341264	125261795	125341264	+	transcript3555.chr9.nic@GAPVD1	transcript3555.chr9.nic	protein_coding	125261795,125268936,125298890,125301983,125305063,125307413,125307691,125312452,125321433,125323798,125326416,125330078,125331926,125332510,125337018,125337221,125341177	125261959,125268984,125299106,125302826,125305149,125307547,125307880,125312612,125321499,125323923,125326589,125330218,125332060,125332629,125337095,125337591,125341264	Gene ID= ENSG00000165219.21 TPM= 5.84 Transcript Type= NA
chr9	125437394	125707234	125437394	125707234	-	ENST00000394063.5@MAPKAP1	ENST00000394063.5	protein_coding	125706971,125657651,125585555,125559633,125543059,125506310,125484443,125467972,125444501,125437394	125707234,125657799,125585727,125559809,125543168,125506417,125484583,125468109,125444598,125439012	Gene ID= ENSG00000119487.16 TPM= 3.79 Transcript Type= protein_coding
chr9	125437394	125707234	125437394	125707234	-	ENST00000265960.7@MAPKAP1	ENST00000265960.7	protein_coding	125706971,125672316,125669818,125657651,125585555,125559633,125543059,125506310,125484443,125467972,125444501,125437394	125707234,125672643,125669907,125657799,125585727,125559809,125543168,125506417,125484583,125468109,125444598,125439012	Gene ID= ENSG00000119487.16 TPM= 59.84 Transcript Type= protein_coding
chr9	125437394	125707203	125437394	125707203	-	ENST00000350766.7@MAPKAP1	ENST00000350766.7	protein_coding	125706971,125672316,125669818,125657651,125585555,125559633,125543059,125484443,125467972,125444501,125437394	125707203,125672643,125669907,125657799,125585727,125559809,125543168,125484583,125468109,125444598,125439012	Gene ID= ENSG00000119487.16 TPM= 21.02 Transcript Type= protein_coding
chr9	125521468	125707231	125521468	125707231	-	ENST00000394060.7@MAPKAP1	ENST00000394060.7	protein_coding	125706971,125672316,125669818,125657651,125585555,125559633,125543059,125521468	125707231,125672643,125669907,125657799,125585727,125559809,125543168,125521765	Gene ID= ENSG00000119487.16 TPM= 4.67 Transcript Type= protein_coding
chr9	125460411	125464231	125460411	125464231	+	transcript3589.chr9.nnic@NA	transcript3589.chr9.nnic	NA	125460411	125464231	Gene ID= novel_gene_chr9_3590 TPM= 12.84 Transcript Type= NA
chr9	125747345	125967377	125747345	125967377	+	ENST00000342287.9@PBX3	ENST00000342287.9	protein_coding	125747345,125748550,125915686,125929655,125935472,125960684,125963012,125965831	125747653,125748623,125915927,125929845,125935607,125960849,125963101,125967377	Gene ID= ENSG00000167081.16 TPM= 21.8 Transcript Type= protein_coding
chr9	125747438	125967377	125747438	125967377	+	ENST00000373489.9@PBX3	ENST00000373489.9	protein_coding	125747438,125748550,125915686,125929655,125935472,125960684,125962102,125963012,125965831	125747653,125748623,125915927,125929845,125935607,125960849,125962214,125963101,125967377	Gene ID= ENSG00000167081.16 TPM= 9.54 Transcript Type= protein_coding
chr9	125748199	125967377	125748199	125967377	+	ENST00000447726.6@PBX3	ENST00000447726.6	protein_coding	125748199,125748550,125915686,125929655,125935472,125960684,125962102,125963012,125965831	125748428,125748623,125915927,125929845,125935607,125960849,125962214,125963101,125967377	Gene ID= ENSG00000167081.16 TPM= 3.7 Transcript Type= protein_coding
chr9	126335095	126507041	126335095	126507041	+	transcript3625.chr9.nic@MVB12B	transcript3625.chr9.nic	protein_coding	126335095,126340508,126381064,126386562,126392066,126395575,126421854,126481369,126483973,126503177	126335407,126340630,126381171,126386658,126392195,126395697,126421948,126481424,126484032,126507041	Gene ID= ENSG00000196814.14 TPM= 33.86 Transcript Type= NA
chr9	126326826	126456460	126326826	126456460	+	transcript3627.chr9.nnic@MVB12B	transcript3627.chr9.nnic	protein_coding	126326826,126340508,126381064,126386562,126392066,126395575,126421854,126455209	126327010,126340630,126381171,126386658,126392195,126395697,126421948,126456460	Gene ID= ENSG00000196814.14 TPM= 2.34 Transcript Type= NA
chr9	126326849	126507041	126326849	126507041	+	ENST00000361171.7@MVB12B	ENST00000361171.7	protein_coding	126326849,126340508,126381064,126386562,126392066,126395575,126421854,126481369,126483973,126503177	126327010,126340630,126381171,126386658,126392195,126395697,126421948,126481424,126484032,126507041	Gene ID= ENSG00000196814.14 TPM= 35.03 Transcript Type= protein_coding
chr9	126805006	126838210	126805006	126838210	+	ENST00000449886.5@ZBTB43	ENST00000449886.5	protein_coding	126805006,126832487	126805132,126838210	Gene ID= ENSG00000169155.9 TPM= 5.25 Transcript Type= protein_coding
chr9	126805015	126838210	126805015	126838210	+	ENST00000373464.4@ZBTB43	ENST00000373464.4	protein_coding	126805015,126808793,126832487	126805132,126808915,126838210	Gene ID= ENSG00000169155.9 TPM= 7.59 Transcript Type= protein_coding
chr9	126860665	126885878	126860665	126885878	+	ENST00000319119.4@ZBTB34	ENST00000319119.4	protein_coding	126860665,126879390	126860739,126885878	Gene ID= ENSG00000177125.5 TPM= 15.18 Transcript Type= protein_coding
chr9	127087332	127122883	127087332	127122883	-	ENST00000373425.7@ANGPTL2	ENST00000373425.7	protein_coding	127122315,127107915,127093733,127091670,127087332	127122883,127108780,127093926,127091940,127089138	Gene ID= ENSG00000136859.9 TPM= 15.18 Transcript Type= protein_coding
chr9	127397129	127407652	127397129	127407652	+	transcript3654.chr9.nic@SLC2A8	transcript3654.chr9.nic	protein_coding	127397129,127397376,127397905,127399907,127402557,127403660,127403959,127404818,127405420,127407436	127397286,127397538,127398111,127400006,127402753,127403803,127404067,127404991,127405565,127407652	Gene ID= ENSG00000136856.17 TPM= 2.34 Transcript Type= NA
chr9	127397190	127407667	127397190	127407667	+	transcript3655.chr9.nic@SLC2A8	transcript3655.chr9.nic	protein_coding	127397190,127397376,127397905,127399907,127402557,127403738,127403959,127404818,127405420,127407112	127397286,127397538,127398111,127400006,127402753,127403803,127404067,127404991,127405565,127407667	Gene ID= ENSG00000136856.17 TPM= 2.34 Transcript Type= NA
chr9	127397129	127407667	127397129	127407667	+	transcript3658.chr9.nic@SLC2A8	transcript3658.chr9.nic	protein_coding	127397129,127397376,127399907,127402557,127403660,127403959,127404818,127405420,127407112	127397286,127397538,127400006,127402753,127403803,127404067,127404991,127405565,127407667	Gene ID= ENSG00000136856.17 TPM= 5.84 Transcript Type= NA
chr9	127397145	127408419	127397145	127408419	+	transcript3659.chr9.nnic@SLC2A8	transcript3659.chr9.nnic	protein_coding	127397145,127399907,127402557,127403660,127403959,127404818,127405420,127407112,127408234	127397286,127400006,127402753,127403803,127404067,127404991,127405565,127407378,127408419	Gene ID= ENSG00000136856.17 TPM= 2.34 Transcript Type= NA
chr9	127397138	127407855	127397138	127407855	+	ENST00000610552.4@SLC2A8	ENST00000610552.4	protein_coding	127397138,127399907,127402557,127403660,127403959,127404818,127405420,127407112	127397286,127400006,127402753,127403803,127404067,127404991,127405565,127407855	Gene ID= ENSG00000136856.17 TPM= 1.17 Transcript Type= protein_coding
chr9	127397142	127407898	127397142	127407898	+	ENST00000373371.7@SLC2A8	ENST00000373371.7	protein_coding	127397142,127397376,127397905,127399907,127402557,127403660,127403959,127404818,127405420,127407112	127397286,127397538,127398111,127400006,127402753,127403803,127404067,127404991,127405565,127407898	Gene ID= ENSG00000136856.17 TPM= 18.68 Transcript Type= protein_coding
chr9	127400168	127402732	127400168	127402732	-	transcript3671.chr9.nnic@NA	transcript3671.chr9.nnic	NA	127400168	127402732	Gene ID= novel_gene_chr9_3672 TPM= 4.67 Transcript Type= NA
chr9	127444511	127446289	127444511	127446289	+	transcript3677.chr9.nnic@NA	transcript3677.chr9.nnic	NA	127444511	127446289	Gene ID= novel_gene_chr9_3678 TPM= 2.34 Transcript Type= NA
chr9	127447674	127451405	127447674	127451405	-	ENST00000497825.5@RPL12	ENST00000497825.5	protein_coding	127451050,127450731,127449610,127449281,127448337,127447877,127447674	127451405,127450804,127449708,127449362,127448423,127447989,127447726	Gene ID= ENSG00000197958.12 TPM= 8.76 Transcript Type= processed_transcript
chr9	127447674	127451405	127447674	127451405	-	ENST00000361436.9@RPL12	ENST00000361436.9	protein_coding	127451281,127450731,127449610,127449281,127448337,127447877,127447674	127451405,127450804,127449708,127449362,127448423,127447989,127447726	Gene ID= ENSG00000197958.12 TPM= 451.27 Transcript Type= protein_coding
chr9	127451486	127503501	127451486	127503501	+	ENST00000300417.10@LRSAM1	ENST00000300417.10	protein_coding	127451486,127451929,127454496,127454998,127455576,127457316,127459003,127461173,127462252,127467740,127473801,127478934,127479383,127479839,127481183,127482950,127485736,127487676,127489444,127491215,127492802,127495320,127495964,127497253,127501010,127502774	127451669,127452084,127454599,127455054,127455620,127457393,127459071,127461257,127462373,127467830,127473931,127478963,127479505,127479978,127481227,127483020,127485835,127487763,127489518,127491295,127492897,127495418,127496095,127497334,127501143,127503501	Gene ID= ENSG00000148356.13 TPM= 35.61 Transcript Type= protein_coding
chr9	127451513	127503499	127451513	127503499	+	ENST00000323301.8@LRSAM1	ENST00000323301.8	protein_coding	127451513,127454496,127454998,127455576,127457316,127459003,127461173,127462252,127467740,127473801,127478934,127479383,127479839,127481183,127482950,127485736,127487676,127489444,127491215,127492802,127495320,127495964,127497253,127501010,127502774	127452084,127454599,127455054,127455620,127457393,127459071,127461257,127462373,127467830,127473931,127478963,127479505,127479978,127481227,127483020,127485835,127487763,127489518,127491295,127492897,127495418,127496095,127497334,127501143,127503499	Gene ID= ENSG00000148356.13 TPM= 27.44 Transcript Type= protein_coding
chr9	127459219	127460516	127459219	127460516	-	transcript3690.chr9.nnic@NA	transcript3690.chr9.nnic	NA	127459219	127460516	Gene ID= novel_gene_chr9_3691 TPM= 5.84 Transcript Type= NA
chr9	127505343	127569145	127505343	127569145	-	transcript3699.chr9.nnic@FAM129B	transcript3699.chr9.nnic	protein_coding	127568820,127531648,127527194,127525058,127523679,127517826,127517112,127516857,127510146,127508976,127508422,127508093,127507867,127506196,127505343	127569145,127531778,127527322,127525163,127523846,127517941,127517216,127517019,127510333,127509131,127508538,127508200,127507978,127507431,127505612	Gene ID= ENSG00000136830.11 TPM= 43.47 Transcript Type= NA
chr9	127505343	127569088	127505343	127569088	-	ENST00000373312.3@FAM129B	ENST00000373312.3	protein_coding	127568820,127531648,127527194,127525058,127523679,127517826,127517112,127516857,127510146,127508976,127508422,127508093,127507867,127505343	127569088,127531778,127527322,127525163,127523846,127517941,127517216,127517019,127510333,127509131,127508538,127508200,127507978,127507431	Gene ID= ENSG00000136830.11 TPM= 642.64 Transcript Type= protein_coding
chr9	127690134	127692715	127690134	127692715	+	ENST00000628768.1@STXBP1	ENST00000628768.1	protein_coding	127690134	127692715	Gene ID= ENSG00000136854.19 TPM= 4.09 Transcript Type= processed_transcript
chr9	127612207	127692716	127612207	127692716	+	ENST00000373302.7@STXBP1	ENST00000373302.7	protein_coding	127612207,127651603,127653715,127658375,127660030,127661102,127663205,127665247,127666166,127668080,127669898,127672051,127673181,127675804,127676644,127678431,127680157,127682406,127684368,127690775	127612440,127651652,127653796,127658451,127660108,127661205,127663353,127665331,127666296,127668187,127669958,127672116,127673261,127675942,127676753,127678532,127680242,127682560,127684493,127692716	Gene ID= ENSG00000136854.19 TPM= 2.34 Transcript Type= protein_coding
chr9	127612283	127692716	127612283	127692716	+	ENST00000373299.4@STXBP1	ENST00000373299.4	protein_coding	127612283,127651603,127653715,127658375,127660030,127661102,127663205,127665247,127666166,127668080,127669898,127672051,127673181,127675804,127676644,127678431,127680157,127682406,127690775	127612440,127651652,127653796,127658451,127660108,127661205,127663353,127665331,127666296,127668187,127669958,127672116,127673261,127675942,127676753,127678532,127680242,127682560,127692716	Gene ID= ENSG00000136854.19 TPM= 18.1 Transcript Type= protein_coding
chr9	127713510	127724873	127713510	127724873	-	ENST00000419060.5@PTRH1	ENST00000419060.5	protein_coding	127724737,127715544,127714975,127714603,127714379,127713510	127724873,127716959,127715194,127714702,127714424,127714282	Gene ID= ENSG00000187024.14 TPM= 2.34 Transcript Type= protein_coding
chr9	127713949	127715657	127713949	127715657	-	ENST00000543175.4@PTRH1	ENST00000543175.4	protein_coding	127715544,127714975,127714603,127714379,127713949	127715657,127715194,127714702,127714424,127714282	Gene ID= ENSG00000187024.14 TPM= 22.18 Transcript Type= protein_coding
chr9	127708482	127711678	127708482	127711678	-	transcript3745.chr9.nnic@NA	transcript3745.chr9.nnic	NA	127708482	127711678	Gene ID= novel_gene_chr9_3746 TPM= 5.84 Transcript Type= NA
chr9	127731524	127735317	127731524	127735317	-	ENST00000373284.9@TOR2A	ENST00000373284.9	protein_coding	127735120,127734299,127733385,127732564,127731524	127735317,127734564,127733560,127732691,127732278	Gene ID= ENSG00000160404.17 TPM= 11.68 Transcript Type= protein_coding
chr9	127731525	127735294	127731525	127735294	-	ENST00000463577.2@TOR2A	ENST00000463577.2	protein_coding	127735120,127731525	127735294,127733560	Gene ID= ENSG00000160404.17 TPM= 1.17 Transcript Type= protein_coding
chr9	127738318	127771369	127738318	127771369	-	ENST00000373276.7@SH2D3C	ENST00000373276.7	protein_coding	127771186,127766901,127761611,127751172,127749211,127747147,127744564,127742849,127741788,127740258,127739682,127738318	127771369,127767271,127761650,127751300,127749665,127747271,127745099,127742964,127741959,127740369,127739888,127738921	Gene ID= ENSG00000095370.19 TPM= 12.57 Transcript Type= protein_coding
chr9	127738318	127762418	127738318	127762418	-	ENST00000429553.5@SH2D3C	ENST00000429553.5	protein_coding	127762121,127761611,127751172,127749211,127747147,127744564,127742849,127741788,127740258,127739682,127738318	127762418,127761650,127751300,127749665,127747271,127745099,127742964,127741959,127740369,127739888,127738921	Gene ID= ENSG00000095370.19 TPM= 65.12 Transcript Type= protein_coding
chr9	127738317	127762455	127738317	127762455	-	transcript3761.chr9.nic@SH2D3C	transcript3761.chr9.nic	protein_coding	127762392,127761611,127751172,127749211,127747147,127744564,127742849,127741788,127740258,127739682,127738317	127762455,127761650,127751300,127749665,127747271,127745099,127742964,127741959,127740369,127739888,127738921	Gene ID= ENSG00000095370.19 TPM= 35.73 Transcript Type= NA
chr9	127738317	127771438	127738317	127771438	-	ENST00000373277.8@SH2D3C	ENST00000373277.8	protein_coding	127771186,127761611,127751172,127749211,127747147,127744564,127742849,127741788,127740258,127739682,127738317	127771438,127761650,127751300,127749665,127747271,127745099,127742964,127741959,127740369,127739888,127738921	Gene ID= ENSG00000095370.19 TPM= 115.12 Transcript Type= protein_coding
chr9	127738318	127755304	127738318	127755304	-	ENST00000420366.5@SH2D3C	ENST00000420366.5	protein_coding	127755079,127751172,127749211,127747147,127744564,127742849,127741788,127740258,127739682,127738318	127755304,127751300,127749665,127747271,127745099,127742964,127741959,127740369,127739888,127738921	Gene ID= ENSG00000095370.19 TPM= 11.79 Transcript Type= protein_coding
chr9	127738319	127778741	127738319	127778741	-	ENST00000314830.12@SH2D3C	ENST00000314830.12	protein_coding	127778591,127773990,127761611,127751172,127749211,127747147,127744564,127742849,127741788,127740258,127739682,127738319	127778741,127774467,127761650,127751300,127749665,127747271,127745099,127742964,127741959,127740369,127739888,127738921	Gene ID= ENSG00000095370.19 TPM= 15.52 Transcript Type= protein_coding
chr9	127785567	127790084	127785567	127790084	+	transcript3876.chr9.nic@CDK9	transcript3876.chr9.nic	protein_coding	127785567,127786701,127787518,127787947,127788214,127789178	127786240,127786782,127787608,127788113,127788692,127790084	Gene ID= ENSG00000136807.13 TPM= 17.9 Transcript Type= NA
chr9	127785184	127790084	127785184	127790084	+	transcript3877.chr9.nic@CDK9	transcript3877.chr9.nic	protein_coding	127785184,127786701,127787518,127788214,127788544,127789178	127786240,127786782,127788113,127788385,127788692,127790084	Gene ID= ENSG00000136807.13 TPM= 12.06 Transcript Type= NA
chr9	127785567	127790084	127785567	127790084	+	transcript3882.chr9.nic@CDK9	transcript3882.chr9.nic	protein_coding	127785567,127786701,127787518,127788214,127789178	127786240,127786782,127788113,127788692,127790084	Gene ID= ENSG00000136807.13 TPM= 6.22 Transcript Type= NA
chr9	127793691	127797031	127793691	127797031	-	transcript3896.chr9.nnic@NA	transcript3896.chr9.nnic	NA	127793691	127797031	Gene ID= novel_gene_chr9_3897 TPM= 5.84 Transcript Type= NA
chr9	127802867	127814506	127802867	127814506	+	transcript3788.chr9.nic@FPGS	transcript3788.chr9.nic	protein_coding	127802867,127804285,127804499,127804636,127806973,127807209,127807421,127807586,127808234,127808558,127808800,127809684,127810031,127810945,127813195,127814208	127803062,127804413,127804552,127804700,127807087,127807286,127807482,127807688,127808311,127808705,127808889,127809834,127810106,127811011,127813323,127814506	Gene ID= ENSG00000136877.14 TPM= 18.68 Transcript Type= NA
chr9	127803208	127814059	127803208	127814059	+	ENST00000373225.7@FPGS	ENST00000373225.7	protein_coding	127803208,127804285,127804499,127804636,127806973,127807209,127807421,127807586,127808234,127808558,127808800,127809684,127810031,127810945,127813195	127803404,127804413,127804552,127804700,127807087,127807286,127807482,127807688,127808311,127808705,127808889,127809834,127810106,127811011,127814059	Gene ID= ENSG00000136877.14 TPM= 16.05 Transcript Type= protein_coding
chr9	127802858	127814081	127802858	127814081	+	ENST00000630236.2@FPGS	ENST00000630236.2	protein_coding	127802858,127804285,127804499,127804636,127806973,127807209,127807421,127807586,127808234,127808800,127809684,127810031,127810945,127813195	127803062,127804413,127804552,127804700,127807087,127807286,127807482,127807688,127808311,127808889,127809834,127810106,127811011,127814081	Gene ID= ENSG00000136877.14 TPM= 4.87 Transcript Type= protein_coding
chr9	127802875	127814069	127802875	127814069	+	ENST00000373247.6@FPGS	ENST00000373247.6	protein_coding	127802875,127804285,127804499,127804636,127806973,127807209,127807421,127807586,127808234,127808558,127808800,127809684,127810031,127810945,127813195	127803062,127804413,127804552,127804700,127807087,127807286,127807482,127807688,127808311,127808705,127808889,127809834,127810106,127811011,127814069	Gene ID= ENSG00000136877.14 TPM= 103.53 Transcript Type= protein_coding
chr9	127802918	127814058	127802918	127814058	+	ENST00000460181.5@FPGS	ENST00000460181.5	protein_coding	127802918,127804285,127804499,127804636,127806992,127807209,127807421,127807586,127808234,127808558,127808800,127809684,127810031,127810945,127813195	127803062,127804413,127804552,127804700,127807087,127807286,127807482,127807688,127808311,127808705,127808889,127809834,127810106,127811011,127814058	Gene ID= ENSG00000136877.14 TPM= 3.79 Transcript Type= processed_transcript
chr9	127815013	127847167	127815013	127847167	-	ENST00000480266.5@ENG	ENST00000480266.5	protein_coding	127846943,127843094,127829687,127826510,127825695,127825231,127824800,127824304,127819900,127819622,127818716,127818120,127817149,127815943,127815013	127847167,127843245,127829827,127826672,127825860,127825357,127824974,127824446,127820037,127819660,127818832,127818377,127817203,127816053,127815806	Gene ID= ENSG00000106991.13 TPM= 104.91 Transcript Type= protein_coding
chr9	127815012	127854756	127815012	127854756	-	ENST00000373203.8@ENG	ENST00000373203.8	protein_coding	127854289,127843094,127829687,127826510,127825695,127825231,127824800,127824304,127819900,127819622,127818716,127818120,127817149,127815943,127815012	127854756,127843245,127829827,127826672,127825860,127825357,127824974,127824446,127820037,127819660,127818832,127818377,127817203,127816053,127815806	Gene ID= ENSG00000106991.13 TPM= 1417.09 Transcript Type= protein_coding
chr9	127815017	127854636	127815017	127854636	-	ENST00000344849.4@ENG	ENST00000344849.4	protein_coding	127854289,127843094,127829687,127826510,127825695,127825231,127824800,127824304,127819900,127819622,127818716,127818120,127817149,127815017	127854636,127843245,127829827,127826672,127825860,127825357,127824974,127824446,127820037,127819660,127818832,127818377,127817203,127816053	Gene ID= ENSG00000106991.13 TPM= 36.38 Transcript Type= protein_coding
chr9	127866480	127877743	127866480	127877743	-	ENST00000373176.5@AK1	ENST00000373176.5	protein_coding	127877623,127874611,127873026,127872690,127871823,127868321,127866480	127877743,127874649,127873061,127872853,127871939,127868512,127868076	Gene ID= ENSG00000106992.17 TPM= 31.53 Transcript Type= protein_coding
chr9	127867841	127899660	127867841	127899660	-	transcript3916.chr9.nic@AL157935.2	transcript3916.chr9.nic	processed_transcript	127899503,127897956,127896242,127894512,127890637,127887484,127885186,127874611,127873026,127872690,127871823,127868321,127867841	127899660,127898010,127896332,127894691,127891043,127887591,127886788,127874649,127873061,127872853,127871939,127868512,127868076	Gene ID= ENSG00000257524.5 TPM= 9.92 Transcript Type= NA
chr9	127885322	127897408	127885322	127897408	-	ENST00000373141.5@ST6GALNAC6	ENST00000373141.5	protein_coding	127897238,127896242,127894512,127890637,127887484,127885322	127897408,127896332,127894691,127891043,127887591,127886788	Gene ID= ENSG00000160408.14 TPM= 6.04 Transcript Type= protein_coding
chr9	127885322	127899655	127885322	127899655	-	ENST00000373144.7@ST6GALNAC6	ENST00000373144.7	protein_coding	127899503,127896242,127894512,127890637,127887484,127885322	127899655,127896332,127894691,127891043,127887591,127886788	Gene ID= ENSG00000160408.14 TPM= 94.77 Transcript Type= protein_coding
chr9	127885321	127905348	127885321	127905348	-	ENST00000622357.4@ST6GALNAC6	ENST00000622357.4	protein_coding	127905207,127896242,127894512,127890637,127887484,127885321	127905348,127896332,127894691,127891043,127887591,127886788	Gene ID= ENSG00000160408.14 TPM= 18.1 Transcript Type= protein_coding
chr9	127885326	127899574	127885326	127899574	-	ENST00000485320.5@ST6GALNAC6	ENST00000485320.5	protein_coding	127899503,127897956,127896242,127894512,127890656,127887484,127885326	127899574,127898010,127896332,127894691,127891043,127887591,127886788	Gene ID= ENSG00000160408.14 TPM= 6.42 Transcript Type= processed_transcript
chr9	127907886	127917053	127907886	127917053	-	transcript3947.chr9.nnic@ST6GALNAC4	transcript3947.chr9.nnic	protein_coding	127916826,127916408,127914656,127912268,127909951,127908318,127907886	127917053,127916494,127914841,127912680,127910058,127908581,127908168	Gene ID= ENSG00000136840.18 TPM= 50.92 Transcript Type= NA
chr9	127907886	127917053	127907886	127917053	-	transcript3949.chr9.nnic@ST6GALNAC4	transcript3949.chr9.nnic	protein_coding	127916826,127916408,127914656,127912268,127909951,127908216,127907886	127917053,127916494,127914841,127912680,127910058,127908581,127908171	Gene ID= ENSG00000136840.18 TPM= 9.47 Transcript Type= NA
chr9	127907886	127917026	127907886	127917026	-	ENST00000335791.9@ST6GALNAC4	ENST00000335791.9	protein_coding	127916826,127916408,127914656,127912268,127909951,127907886	127917026,127916494,127914841,127912680,127910058,127908581	Gene ID= ENSG00000136840.18 TPM= 24.65 Transcript Type= protein_coding
chr9	127920879	127930797	127920879	127930797	-	ENST00000388747.8@PIP5KL1	ENST00000388747.8	protein_coding	127930723,127929688,127928433,127928065,127927648,127927297,127927153,127925867,127925107,127920879	127930797,127929885,127928483,127928219,127927772,127927331,127927208,127925979,127925260,127922114	Gene ID= ENSG00000167103.11 TPM= 1.17 Transcript Type= protein_coding
chr9	127935099	127938484	127935099	127938484	-	ENST00000314392.12@DPM2	ENST00000314392.12	protein_coding	127937818,127937434,127936553,127935099	127938484,127937523,127936655,127935780	Gene ID= ENSG00000136908.17 TPM= 62.66 Transcript Type= protein_coding
chr9	127935099	127937847	127935099	127937847	-	transcript3986.chr9.nic@DPM2	transcript3986.chr9.nic	protein_coding	127936553,127935099	127937847,127935780	Gene ID= ENSG00000136908.17 TPM= 11.29 Transcript Type= NA
chr9	127935099	127937826	127935099	127937826	-	ENST00000495270.1@DPM2	ENST00000495270.1	protein_coding	127937818,127936553,127935099	127937826,127937523,127935780	Gene ID= ENSG00000136908.17 TPM= 25.3 Transcript Type= retained_intron
chr9	127940579	127980513	127940579	127980513	-	ENST00000373095.5@FAM102A	ENST00000373095.5	protein_coding	127979992,127953805,127953575,127950423,127948368,127948071,127945649,127945367,127944777,127944615,127940579	127980513,127953925,127953604,127950539,127948414,127948225,127945753,127945562,127944898,127944684,127943237	Gene ID= ENSG00000167106.11 TPM= 17.51 Transcript Type= protein_coding
chr9	128061233	128067335	128061233	128067335	-	transcript4012.chr9.nic@NAIF1	transcript4012.chr9.nic	protein_coding	128066591,128063374,128061233	128067335,128063900,128061826	Gene ID= ENSG00000171169.8 TPM= 4.67 Transcript Type= NA
chr9	128061233	128067321	128061233	128067321	-	ENST00000373078.4@NAIF1	ENST00000373078.4	protein_coding	128066591,128061233	128067321,128063900	Gene ID= ENSG00000171169.8 TPM= 7.01 Transcript Type= protein_coding
chr9	128098304	128109245	128098304	128109245	+	ENST00000373064.9@SLC25A25	ENST00000373064.9	protein_coding	128098304,128101096,128101309,128102370,128103681,128105729,128106150,128106353,128107029,128107260	128098725,128101222,128101396,128102481,128103839,128105881,128106257,128106520,128107179,128109245	Gene ID= ENSG00000148339.12 TPM= 28.02 Transcript Type= protein_coding
chr9	128098507	128109245	128098507	128109245	+	transcript3996.chr9.nic@SLC25A25	transcript3996.chr9.nic	protein_coding	128098507,128101309,128102370,128103681,128105729,128106150,128106353,128107029,128107260	128101222,128101396,128102481,128103839,128105881,128106257,128106520,128107179,128109245	Gene ID= ENSG00000148339.12 TPM= 6.22 Transcript Type= NA
chr9	128101908	128109245	128101908	128109245	+	transcript3998.chr9.nic@SLC25A25	transcript3998.chr9.nic	protein_coding	128101908,128102370,128103681,128105729,128106150,128106353,128107029,128107260	128102115,128102481,128103839,128105881,128106257,128106520,128107179,128109245	Gene ID= ENSG00000148339.12 TPM= 8.17 Transcript Type= NA
chr9	128068201	128109244	128068201	128109244	+	ENST00000373068.6@SLC25A25	ENST00000373068.6	protein_coding	128068201,128101096,128101309,128102370,128103681,128105729,128106150,128106353,128107029,128107260	128068580,128101222,128101396,128102481,128103839,128105881,128106257,128106520,128107179,128109244	Gene ID= ENSG00000148339.12 TPM= 26.47 Transcript Type= protein_coding
chr9	128120693	128128462	128120693	128128462	-	ENST00000338961.10@PTGES2	ENST00000338961.10	protein_coding	128127439,128125244,128124492,128123702,128122934,128122362,128120693	128128462,128125441,128124550,128123851,128123134,128122479,128121273	Gene ID= ENSG00000148334.14 TPM= 120.85 Transcript Type= protein_coding
chr9	128120693	128128433	128120693	128128433	-	transcript4001.chr9.nic@PTGES2	transcript4001.chr9.nic	protein_coding	128128248,128125244,128124492,128123702,128122934,128122362,128120693	128128433,128125441,128124550,128123851,128123134,128122479,128121273	Gene ID= ENSG00000148334.14 TPM= 7.59 Transcript Type= NA
chr9	128120693	128127731	128120693	128127731	-	transcript4008.chr9.nic@PTGES2	transcript4008.chr9.nic	protein_coding	128127439,128125244,128124492,128123702,128122362,128120693	128127731,128125441,128124550,128123851,128123134,128121273	Gene ID= ENSG00000148334.14 TPM= 14.59 Transcript Type= NA
chr9	128120723	128127717	128120723	128127717	-	ENST00000496594.5@PTGES2	ENST00000496594.5	protein_coding	128127439,128125244,128124779,128124492,128123702,128122362,128120723	128127717,128125441,128124871,128124550,128123851,128123134,128121273	Gene ID= ENSG00000148334.14 TPM= 4.67 Transcript Type= retained_intron
chr9	128125414	128127211	128125414	128127211	+	transcript4015.chr9.nnic@NA	transcript4015.chr9.nnic	NA	128125414	128127211	Gene ID= novel_gene_chr9_4016 TPM= 2.34 Transcript Type= NA
chr9	128149453	128153455	128149453	128153455	+	ENST00000277480.6@LCN2	ENST00000277480.6	protein_coding	128149453,128150238,128151638,128151906,128152183,128153100,128153311	128149663,128150374,128151717,128152025,128152284,128153126,128153455	Gene ID= ENSG00000148346.11 TPM= 4.67 Transcript Type= protein_coding
chr9	128160219	128163924	128160219	128163924	+	transcript4043.chr9.nic@C9orf16	transcript4043.chr9.nic	protein_coding	128160219,128162004	128160486,128163924	Gene ID= ENSG00000171159.4 TPM= 2.34 Transcript Type= NA
chr9	128160314	128163890	128160314	128163890	+	ENST00000492588.1@C9orf16	ENST00000492588.1	protein_coding	128160314,128162004,128163443	128160486,128162952,128163890	Gene ID= ENSG00000171159.4 TPM= 1.17 Transcript Type= processed_transcript
chr9	128160260	128163928	128160260	128163928	+	ENST00000372994.1@C9orf16	ENST00000372994.1	protein_coding	128160260,128163443	128160486,128163928	Gene ID= ENSG00000171159.4 TPM= 38.53 Transcript Type= protein_coding
chr9	128166073	128191589	128166073	128191589	-	ENST00000372938.9@CIZ1	ENST00000372938.9	protein_coding	128191432,128190688,128190329,128187863,128185547,128180721,128180415,128178709,128178369,128177566,128176351,128170020,128169406,128169052,128167095,128166759,128166073	128191589,128190862,128190444,128187934,128185776,128180814,128180523,128179415,128178490,128177763,128176475,128170107,128169519,128169201,128167164,128166880,128166406	Gene ID= ENSG00000148337.20 TPM= 79.1 Transcript Type= protein_coding
chr9	128166071	128191795	128166071	128191795	-	transcript4026.chr9.nic@CIZ1	transcript4026.chr9.nic	protein_coding	128191732,128190688,128190329,128187863,128185547,128180721,128180415,128178709,128178369,128177566,128176351,128170020,128169406,128169052,128167095,128166759,128166071	128191795,128190862,128190444,128187934,128185776,128180814,128180523,128179415,128178490,128177763,128176475,128170107,128169519,128169201,128167164,128166880,128166406	Gene ID= ENSG00000148337.20 TPM= 32.25 Transcript Type= NA
chr9	128166065	128191568	128166065	128191568	-	ENST00000372954.5@CIZ1	ENST00000372954.5	protein_coding	128191432,128190688,128190329,128185547,128180721,128180415,128179073,128178709,128178369,128177566,128176351,128170020,128169406,128169052,128167095,128166759,128166065	128191568,128190862,128190444,128185776,128180814,128180523,128179415,128178904,128178490,128177763,128176475,128170107,128169519,128169201,128167164,128166880,128166406	Gene ID= ENSG00000148337.20 TPM= 9.77 Transcript Type= protein_coding
chr9	128166235	128168541	128166235	128168541	+	transcript4045.chr9.nnic@NA	transcript4045.chr9.nnic	NA	128166235	128168541	Gene ID= novel_gene_chr9_4046 TPM= 3.5 Transcript Type= NA
chr9	128255829	128275948	128255829	128275948	-	transcript4055.chr9.nic@GOLGA2	transcript4055.chr9.nic	protein_coding	128275893,128273850,128272785,128268420,128268117,128267934,128267458,128267194,128266287,128265970,128265788,128265585,128263034,128262563,128261668,128261454,128261172,128260465,128260076,128259167,128259007,128258455,128257980,128257790,128257601,128257369,128255829	128275948,128273972,128272865,128268524,128268160,128267997,128267517,128267274,128266325,128266020,128265881,128265691,128263092,128262704,128261757,128261561,128261259,128260802,128260189,128259391,128259082,128258570,128258198,128257892,128257707,128257525,128257281	Gene ID= ENSG00000167110.17 TPM= 17.51 Transcript Type= NA
chr9	128255829	128275952	128255829	128275952	-	transcript4058.chr9.nic@GOLGA2	transcript4058.chr9.nic	protein_coding	128275893,128273850,128272785,128268420,128268117,128267934,128267458,128266287,128265970,128265788,128265585,128263034,128262563,128261668,128261454,128261172,128260465,128260076,128259167,128259007,128258455,128257980,128257790,128257601,128257369,128255829	128275952,128273972,128272865,128268524,128268160,128267997,128267517,128266325,128266020,128265881,128265691,128263092,128262704,128261757,128261561,128261259,128260802,128260189,128259391,128259082,128258570,128258198,128257892,128257707,128257525,128257281	Gene ID= ENSG00000167110.17 TPM= 14.01 Transcript Type= NA
chr9	128255829	128275952	128255829	128275952	-	transcript4060.chr9.nic@GOLGA2	transcript4060.chr9.nic	protein_coding	128275893,128273850,128268420,128268117,128267934,128267458,128266287,128265970,128265788,128265585,128263034,128262563,128261668,128261454,128261172,128260465,128260076,128259167,128259007,128258455,128257980,128257790,128257601,128257369,128255829	128275952,128273972,128268524,128268160,128267997,128267517,128266325,128266020,128265881,128265691,128263092,128262704,128261757,128261561,128261259,128260802,128260189,128259391,128259082,128258570,128258198,128257892,128257707,128257525,128257281	Gene ID= ENSG00000167110.17 TPM= 9.34 Transcript Type= NA
chr9	128276273	128288988	128276273	128288988	+	transcript4077.chr9.nic@SWI5	transcript4077.chr9.nic	protein_coding	128276273,128284510,128285939,128288652	128276755,128284631,128286033,128288988	Gene ID= ENSG00000175854.11 TPM= 2.34 Transcript Type= NA
chr9	128276244	128288989	128276244	128288989	+	ENST00000418976.1@SWI5	ENST00000418976.1	protein_coding	128276244,128276707,128284510,128285939,128288652	128276402,128276755,128284631,128286033,128288989	Gene ID= ENSG00000175854.11 TPM= 9.34 Transcript Type= protein_coding
chr9	128330984	128334072	128330984	128334072	+	transcript4080.chr9.nic@COQ4	transcript4080.chr9.nic	protein_coding	128330984,128332850,128333474	128332282,128332943,128334072	Gene ID= ENSG00000167113.10 TPM= 15.18 Transcript Type= NA
chr9	128340555	128361220	128340555	128361220	+	transcript4084.chr9.nnic@SLC27A4	transcript4084.chr9.nnic	protein_coding	128340555,128343127,128345155,128348545,128350312,128350484,128352638,128353025,128353415,128355053,128355398,128355650,128360334,128361193	128340838,128343293,128345549,128348703,128350381,128350575,128352747,128353234,128353541,128355190,128355562,128355796,128360865,128361220	Gene ID= ENSG00000167114.12 TPM= 2.34 Transcript Type= NA
chr9	128340480	128361220	128340480	128361220	+	transcript4089.chr9.nnic@SLC27A4	transcript4089.chr9.nnic	protein_coding	128340480,128343127,128345155,128348545,128350312,128350484,128352638,128353025,128353415,128355053,128355398,128355650,128360415	128340838,128343293,128345549,128348703,128350381,128350575,128352747,128353234,128353541,128355190,128355562,128355796,128361220	Gene ID= ENSG00000167114.12 TPM= 3.5 Transcript Type= NA
chr9	128340480	128361217	128340480	128361217	+	transcript4092.chr9.nic@SLC27A4	transcript4092.chr9.nic	protein_coding	128340480,128343127,128345155,128348545,128350312,128350484,128352638,128353025,128355053,128355398,128355650,128360334	128340838,128343293,128345549,128348703,128350381,128350575,128352747,128353541,128355190,128355562,128355796,128361217	Gene ID= ENSG00000167114.12 TPM= 3.5 Transcript Type= NA
chr9	128340480	128357112	128340480	128357112	+	transcript4093.chr9.nic@SLC27A4	transcript4093.chr9.nic	protein_coding	128340480,128343127,128345155,128348545,128350312,128350484,128352638,128353025,128355053,128355398,128355650	128340838,128343293,128345549,128348703,128350381,128350575,128352747,128353541,128355190,128355562,128357112	Gene ID= ENSG00000167114.12 TPM= 3.5 Transcript Type= NA
chr9	128340728	128361470	128340728	128361470	+	ENST00000300456.4@SLC27A4	ENST00000300456.4	protein_coding	128340728,128343127,128345155,128348545,128350312,128350484,128352638,128353025,128353415,128355053,128355398,128355650,128360334	128340838,128343293,128345549,128348703,128350381,128350575,128352747,128353234,128353541,128355190,128355562,128355796,128361470	Gene ID= ENSG00000167114.12 TPM= 3.5 Transcript Type= protein_coding
chr9	128371319	128392016	128371319	128392016	+	ENST00000372853.8@URM1	ENST00000372853.8	protein_coding	128371319,128378036,128387816,128389261,128389666	128371415,128378106,128387897,128389309,128392016	Gene ID= ENSG00000167118.10 TPM= 44.37 Transcript Type= protein_coding
chr9	128371361	128390734	128371361	128390734	+	ENST00000372850.5@URM1	ENST00000372850.5	protein_coding	128371361,128378036,128387816	128371415,128378106,128390734	Gene ID= ENSG00000167118.10 TPM= 7.01 Transcript Type= protein_coding
chr9	128420480	128437347	128420480	128437347	+	ENST00000372838.8@CERCAM	ENST00000372838.8	protein_coding	128420480,128422868,128423146,128424138,128424410,128428302,128428757,128428930,128431171,128434102,128434410,128435653,128436849	128421074,128422978,128423263,128424272,128424614,128428421,128428833,128429036,128431303,128434229,128434613,128435905,128437347	Gene ID= ENSG00000167123.18 TPM= 28.02 Transcript Type= protein_coding
chr9	128456148	128500960	128456148	128500960	+	transcript4105.chr9.nic@ODF2	transcript4105.chr9.nic	protein_coding	128456148,128459567,128460513,128460942,128469183,128471308,128472913,128473610,128481580,128482816,128483938,128484701,128485365,128487890,128492426,128492701,128494510,128496041,128498413,128499001,128500067	128456255,128459657,128460666,128461010,128469353,128471468,128473042,128473741,128481651,128482887,128484054,128484886,128485474,128488025,128492536,128492805,128494668,128496141,128498575,128499126,128500960	Gene ID= ENSG00000136811.16 TPM= 5.84 Transcript Type= NA
chr9	128456006	128501292	128456006	128501292	+	ENST00000351030.7@ODF2	ENST00000351030.7	protein_coding	128456006,128459567,128460513,128460942,128469183,128471308,128472913,128473610,128481580,128482816,128483938,128484701,128485365,128487890,128492426,128492701,128494510,128496041,128498413,128499001,128500067	128456255,128459657,128460666,128461067,128469353,128471468,128473042,128473741,128481651,128482887,128484054,128484886,128485474,128488025,128492536,128492805,128494668,128496141,128498575,128499126,128501292	Gene ID= ENSG00000136811.16 TPM= 9.34 Transcript Type= protein_coding
chr9	128456151	128500960	128456151	128500960	+	transcript4109.chr9.nic@ODF2	transcript4109.chr9.nic	protein_coding	128456151,128459567,128460513,128460942,128471308,128472913,128473610,128481580,128482816,128483938,128484701,128485365,128487890,128492426,128492701,128494510,128496041,128498413,128499001,128500067	128456255,128459657,128460666,128461067,128471468,128473042,128473741,128481651,128482887,128484054,128484886,128485474,128488025,128492536,128492805,128494668,128496141,128498575,128499126,128500960	Gene ID= ENSG00000136811.16 TPM= 4.67 Transcript Type= NA
chr9	128456065	128494833	128456065	128494833	+	transcript4113.chr9.nic@ODF2	transcript4113.chr9.nic	protein_coding	128456065,128459567,128460513,128460942,128469183,128471308,128472913,128473610,128481580,128482816,128483938,128484701,128485365,128487890,128492426,128492701,128494510	128456255,128459657,128460666,128461010,128469353,128471468,128473042,128473741,128481651,128482887,128484054,128484886,128485474,128488025,128492536,128492805,128494833	Gene ID= ENSG00000136811.16 TPM= 2.34 Transcript Type= NA
chr9	128456140	128494833	128456140	128494833	+	transcript4114.chr9.nic@ODF2	transcript4114.chr9.nic	protein_coding	128456140,128459567,128460513,128460942,128469183,128471308,128472913,128473610,128481580,128482816,128483938,128484701,128485365,128487890,128492426,128492701,128494510	128456255,128459657,128460666,128461067,128469353,128471468,128473042,128473741,128481651,128482887,128484054,128484886,128485474,128488025,128492536,128492805,128494833	Gene ID= ENSG00000136811.16 TPM= 3.5 Transcript Type= NA
chr9	128504697	128542288	128504697	128542288	+	transcript4117.chr9.nnic@GLE1	transcript4117.chr9.nnic	protein_coding	128504697,128507216,128508876,128515529,128522668,128523280,128523592,128525192,128527179,128527456,128533513,128533761,128536355,128537986,128539616,128540275,128541102	128504904,128507340,128509097,128515639,128522816,128523340,128523846,128525423,128527291,128527525,128533655,128533951,128536484,128538090,128539698,128540338,128542288	Gene ID= ENSG00000119392.14 TPM= 9.34 Transcript Type= NA
chr9	128504700	128542288	128504700	128542288	+	ENST00000309971.8@GLE1	ENST00000309971.8	protein_coding	128504700,128508876,128515529,128522668,128523280,128523592,128525192,128527179,128527456,128533513,128533761,128536355,128537986,128539616,128540275,128541102	128504904,128509097,128515639,128522816,128523340,128523846,128525423,128527291,128527525,128533655,128533951,128536484,128538090,128539698,128540338,128542288	Gene ID= ENSG00000119392.14 TPM= 64.22 Transcript Type= protein_coding
chr9	128552587	128633659	128552587	128633659	+	ENST00000630804.2@SPTAN1	ENST00000630804.2	protein_coding	128552587,128566738,128568772,128574675,128575199,128576823,128577129,128577352,128578110,128579637,128580922,128581782,128582479,128582694,128583077,128583788,128584282,128584721,128585748,128587606,128588809,128591477,128594175,128598400,128598963,128600080,128603543,128604326,128605034,128605296,128607604,128607852,128608130,128608874,128609122,128609651,128611714,128612109,128613381,128615632,128617640,128617987,128618871,128621158,128624328,128625103,128625769,128626391,128627386,128627925,128630321,128632127,128632431,128632572,128632808,128633209	128552696,128566977,128568897,128574815,128575345,128576956,128577273,128577506,128578245,128579738,128581059,128581892,128582556,128582849,128583281,128583969,128584525,128584843,128585965,128587698,128588943,128591625,128594373,128598504,128598986,128600115,128603590,128604417,128605178,128605477,128607703,128608049,128608276,128608977,128609284,128609665,128611845,128612246,128613485,128615840,128617760,128618108,128619003,128621256,128624487,128625179,128625978,128626687,128627498,128627942,128630375,128632323,128632484,128632718,128632955,128633659	Gene ID= ENSG00000197694.15 TPM= 30.39 Transcript Type= protein_coding
chr9	128552558	128633662	128552558	128633662	+	ENST00000372731.8@SPTAN1	ENST00000372731.8	protein_coding	128552558,128566738,128568772,128574675,128575199,128576823,128577129,128577352,128578110,128579637,128580922,128581782,128582479,128582694,128583077,128583788,128584282,128584721,128585748,128587606,128588809,128591477,128592983,128594175,128598400,128598963,128600080,128603543,128604326,128605034,128605296,128607604,128607852,128608130,128608874,128609122,128611714,128612109,128613381,128615632,128617640,128617987,128618871,128621158,128624328,128625103,128625769,128626391,128627386,128627925,128630321,128632127,128632431,128632572,128632808,128633209	128552696,128566977,128568897,128574815,128575345,128576956,128577273,128577506,128578245,128579738,128581059,128581892,128582556,128582849,128583281,128583969,128584525,128584843,128585965,128587698,128588943,128591625,128593042,128594373,128598504,128598986,128600115,128603590,128604417,128605178,128605477,128607703,128608049,128608276,128608977,128609284,128611845,128612246,128613485,128615840,128617760,128618108,128619003,128621256,128624487,128625179,128625978,128626687,128627498,128627942,128630375,128632323,128632484,128632718,128632955,128633662	Gene ID= ENSG00000197694.15 TPM= 68.34 Transcript Type= protein_coding
chr9	128552590	128633658	128552590	128633658	+	ENST00000372739.5@SPTAN1	ENST00000372739.5	protein_coding	128552590,128566738,128568772,128574675,128575199,128576823,128577129,128577352,128578110,128579637,128580922,128581782,128582479,128582694,128583077,128583788,128584282,128584721,128585748,128587606,128588809,128591477,128592983,128594175,128598400,128598963,128600080,128603543,128604326,128605034,128605296,128607604,128607852,128608130,128608874,128609122,128609651,128611714,128612109,128613381,128615632,128617640,128617987,128618871,128621158,128624328,128625103,128625769,128626391,128627386,128627925,128630321,128632127,128632431,128632572,128632808,128633209	128552696,128566977,128568897,128574815,128575345,128576956,128577273,128577506,128578245,128579738,128581059,128581892,128582556,128582849,128583281,128583969,128584525,128584843,128585965,128587698,128588943,128591625,128593042,128594373,128598504,128598986,128600115,128603590,128604417,128605178,128605477,128607703,128608049,128608276,128608977,128609284,128609665,128611845,128612246,128613485,128615840,128617760,128618108,128619003,128621256,128624487,128625179,128625978,128626687,128627498,128627942,128630375,128632323,128632484,128632718,128632955,128633658	Gene ID= ENSG00000197694.15 TPM= 27.09 Transcript Type= protein_coding
chr9	128552593	128633662	128552593	128633662	+	ENST00000358161.9@SPTAN1	ENST00000358161.9	protein_coding	128552593,128566738,128568772,128574675,128575199,128576823,128577129,128577352,128578110,128579637,128580922,128581782,128582479,128582694,128583077,128583788,128584282,128584721,128585748,128587606,128588809,128591477,128594175,128598400,128598963,128600080,128603543,128604326,128605034,128605296,128607604,128607852,128608130,128608874,128609122,128611714,128612109,128613381,128615632,128617640,128617987,128618871,128621158,128624328,128625103,128625769,128626391,128627386,128627925,128630321,128632127,128632431,128632572,128632808,128633209	128552696,128566977,128568897,128574815,128575345,128576956,128577273,128577506,128578245,128579738,128581059,128581892,128582556,128582849,128583281,128583969,128584525,128584843,128585965,128587698,128588943,128591625,128594373,128598504,128598986,128600115,128603590,128604417,128605178,128605477,128607703,128608049,128608276,128608977,128609284,128611845,128612246,128613485,128615840,128617760,128618108,128619003,128621256,128624487,128625179,128625978,128626687,128627498,128627942,128630375,128632323,128632484,128632718,128632955,128633662	Gene ID= ENSG00000197694.15 TPM= 71.26 Transcript Type= protein_coding
chr9	128633661	128656742	128633661	128656742	-	transcript4137.chr9.nnic@WDR34	transcript4137.chr9.nnic	protein_coding	128656541,128640691,128636918,128636281,128635658,128635092,128634689,128634226,128633661	128656742,128640939,128637027,128636438,128635767,128635175,128634921,128634383,128633982	Gene ID= ENSG00000119333.11 TPM= 8.56 Transcript Type= NA
chr9	128633661	128656787	128633661	128656787	-	ENST00000372715.6@WDR34	ENST00000372715.6	protein_coding	128656541,128640691,128636918,128636281,128635658,128635092,128634689,128634226,128633661	128656787,128640939,128637027,128636438,128635767,128635259,128634921,128634383,128633982	Gene ID= ENSG00000119333.11 TPM= 90.29 Transcript Type= protein_coding
chr9	128633661	128656742	128633661	128656742	-	transcript4142.chr9.nic@WDR34	transcript4142.chr9.nic	protein_coding	128656541,128640691,128636918,128635658,128635092,128634689,128634226,128633661	128656742,128640939,128637027,128636438,128635259,128634921,128634383,128633982	Gene ID= ENSG00000119333.11 TPM= 9.73 Transcript Type= NA
chr9	128633661	128656674	128633661	128656674	-	transcript4144.chr9.nic@WDR34	transcript4144.chr9.nic	protein_coding	128656541,128640691,128636918,128636281,128635092,128634689,128634226,128633661	128656674,128640939,128637027,128636438,128635767,128634921,128634383,128633982	Gene ID= ENSG00000119333.11 TPM= 7.39 Transcript Type= NA
chr9	128633661	128656742	128633661	128656742	-	transcript4146.chr9.nic@WDR34	transcript4146.chr9.nic	protein_coding	128656541,128640691,128636918,128635092,128634689,128634226,128633661	128656742,128640939,128637027,128636438,128634921,128634383,128633982	Gene ID= ENSG00000119333.11 TPM= 12.06 Transcript Type= NA
chr9	128633661	128636163	128633661	128636163	-	transcript4149.chr9.nnic@WDR34	transcript4149.chr9.nnic	protein_coding	128636136,128635658,128635092,128634689,128634226,128633661	128636163,128635767,128635259,128634921,128634383,128633982	Gene ID= ENSG00000119333.11 TPM= 3.89 Transcript Type= NA
chr9	128683281	128684479	128683281	128684479	-	transcript4170.chr9.nnic@NA	transcript4170.chr9.nnic	NA	128683281	128684479	Gene ID= novel_gene_chr9_4171 TPM= 2.34 Transcript Type= NA
chr9	128689226	128696388	128689226	128696388	+	ENST00000322030.12@SET	ENST00000322030.12	protein_coding	128689226,128691170,128691858,128692662,128692868,128693638,128693896,128694641	128689655,128691227,128692000,128692765,128692981,128693808,128694042,128696388	Gene ID= ENSG00000119335.16 TPM= 121.43 Transcript Type= protein_coding
chr9	128704012	128720918	128704012	128720918	+	transcript4177.chr9.nnic@PKN3	transcript4177.chr9.nnic	protein_coding	128704012,128705303,128705734,128706713,128706896,128707222,128713052,128713278,128713499,128714046,128714197,128714562,128714798,128715172,128715369,128716747,128718325,128718549,128719686,128719910,128720203,128720394	128704129,128705543,128705879,128706824,128707023,128707405,128713198,128713387,128713642,128714121,128714365,128714664,128714865,128715235,128715460,128716923,128718387,128718625,128719828,128720017,128720283,128720918	Gene ID= ENSG00000160447.6 TPM= 3.5 Transcript Type= NA
chr9	128704012	128720918	128704012	128720918	+	transcript4181.chr9.nnic@PKN3	transcript4181.chr9.nnic	protein_coding	128704012,128705303,128706713,128706896,128707222,128713052,128713278,128713499,128714046,128714197,128714562,128714798,128715172,128715369,128716747,128718325,128718549,128719686,128719910,128720203,128720394	128704129,128705879,128706824,128707023,128707405,128713198,128713387,128713642,128714121,128714365,128714664,128714865,128715235,128715460,128716923,128718387,128718625,128719828,128720017,128720283,128720918	Gene ID= ENSG00000160447.6 TPM= 3.5 Transcript Type= NA
chr9	128702523	128720918	128702523	128720918	+	ENST00000291906.4@PKN3	ENST00000291906.4	protein_coding	128702523,128705303,128705734,128706713,128706896,128707222,128713052,128713278,128713499,128714046,128714197,128714562,128714798,128715172,128715369,128716747,128718325,128718549,128719686,128719910,128720203,128720394	128702939,128705543,128705879,128706824,128707023,128707405,128713198,128713387,128713642,128714121,128714365,128714664,128714865,128715235,128715460,128716923,128718387,128718625,128719828,128720017,128720283,128720918	Gene ID= ENSG00000160447.6 TPM= 36.2 Transcript Type= protein_coding
chr9	128720869	128724106	128720869	128724106	-	ENST00000372663.8@ZDHHC12	ENST00000372663.8	protein_coding	128723994,128722438,128722009,128721651,128720869	128724106,128722574,128722086,128721817,128721502	Gene ID= ENSG00000160446.18 TPM= 79.4 Transcript Type= protein_coding
chr9	128724445	128733194	128724445	128733194	+	ENST00000443631.1@AL441992.1	ENST00000443631.1	antisense_RNA	128724445,128732842	128724635,128733194	Gene ID= ENSG00000223478.1 TPM= 1.17 Transcript Type= antisense_RNA
chr9	128729786	128771946	128729786	128771946	-	transcript4196.chr9.nic@ZER1	transcript4196.chr9.nic	protein_coding	128771815,128755408,128753809,128753164,128752673,128751413,128751122,128750616,128742530,128741800,128741535,128740772,128739931,128735334,128733426,128729786	128771946,128755659,128753959,128753600,128752849,128751527,128751268,128750789,128742745,128741841,128741654,128740887,128740119,128735431,128733528,128731394	Gene ID= ENSG00000160445.10 TPM= 12.84 Transcript Type= NA
chr9	128729786	128772487	128729786	128772487	-	transcript4197.chr9.nic@ZER1	transcript4197.chr9.nic	protein_coding	128772352,128755408,128753809,128753164,128752673,128751413,128751122,128750616,128742530,128741800,128741535,128740772,128739931,128735334,128733426,128729786	128772487,128755659,128753959,128753600,128752849,128751527,128751268,128750789,128742745,128741841,128741654,128740887,128740119,128735431,128733528,128731394	Gene ID= ENSG00000160445.10 TPM= 8.17 Transcript Type= NA
chr9	128729786	128771934	128729786	128771934	-	transcript4205.chr9.nic@ZER1	transcript4205.chr9.nic	protein_coding	128771581,128753809,128753164,128752673,128751413,128751122,128750616,128742530,128741800,128741535,128740772,128739931,128735334,128733426,128729786	128771934,128753959,128753600,128752849,128751527,128751268,128750789,128742745,128741841,128741654,128740887,128740119,128735431,128733528,128731394	Gene ID= ENSG00000160445.10 TPM= 3.5 Transcript Type= NA
chr9	128750277	128771942	128750277	128771942	-	transcript4210.chr9.nic@ZER1	transcript4210.chr9.nic	protein_coding	128771581,128755408,128753809,128753164,128752673,128751413,128751122,128750277	128771942,128755659,128753959,128753600,128752849,128751527,128751268,128750789	Gene ID= ENSG00000160445.10 TPM= 3.5 Transcript Type= NA
chr9	128729786	128771893	128729786	128771893	-	ENST00000291900.6@ZER1	ENST00000291900.6	protein_coding	128771581,128755408,128753809,128753164,128752673,128751413,128751122,128750616,128742530,128741800,128741535,128740772,128739931,128735334,128733426,128729786	128771893,128755659,128753959,128753600,128752849,128751527,128751268,128750789,128742745,128741841,128741654,128740887,128740119,128735431,128733528,128731394	Gene ID= ENSG00000160445.10 TPM= 70.06 Transcript Type= protein_coding
chr9	128787191	128810424	128787191	128810424	+	transcript4214.chr9.nnic@TBC1D13	transcript4214.chr9.nnic	protein_coding	128787191,128788334,128790735,128791380,128791594,128792492,128797055,128803250,128803956,128805922,128806254,128807814	128787376,128788407,128790775,128791441,128791693,128792574,128797214,128803460,128804119,128806019,128806311,128810424	Gene ID= ENSG00000107021.15 TPM= 7.39 Transcript Type= NA
chr9	128787191	128810424	128787191	128810424	+	transcript4216.chr9.nic@TBC1D13	transcript4216.chr9.nic	protein_coding	128787191,128788334,128791380,128791594,128792492,128797055,128803250,128803956,128805859,128806254,128807814	128787376,128788407,128791441,128791693,128792574,128797214,128803460,128804119,128806019,128806311,128810424	Gene ID= ENSG00000107021.15 TPM= 15.56 Transcript Type= NA
chr9	128795438	128810424	128795438	128810424	+	transcript4220.chr9.nic@TBC1D13	transcript4220.chr9.nic	protein_coding	128795438,128803250,128803956,128805859,128806254,128807814	128797214,128803460,128804119,128806019,128806311,128810424	Gene ID= ENSG00000107021.15 TPM= 7.39 Transcript Type= NA
chr9	128795450	128810424	128795450	128810424	+	transcript4222.chr9.nnic@TBC1D13	transcript4222.chr9.nnic	protein_coding	128795450,128796797,128803250,128805859,128806254,128807814	128796394,128797214,128804119,128806019,128806311,128810424	Gene ID= ENSG00000107021.15 TPM= 6.22 Transcript Type= NA
chr9	128804721	128810424	128804721	128810424	+	transcript4224.chr9.nic@TBC1D13	transcript4224.chr9.nic	protein_coding	128804721,128806254,128807814	128806019,128806311,128810424	Gene ID= ENSG00000107021.15 TPM= 6.22 Transcript Type= NA
chr9	128787204	128810432	128787204	128810432	+	ENST00000372648.9@TBC1D13	ENST00000372648.9	protein_coding	128787204,128788334,128790735,128791380,128791594,128792492,128797055,128803250,128803956,128805859,128806254,128807814	128787376,128788407,128790775,128791441,128791693,128792574,128797214,128803460,128804119,128806019,128806311,128810432	Gene ID= ENSG00000107021.15 TPM= 43.59 Transcript Type= protein_coding
chr9	128818498	128822677	128818498	128822677	+	transcript4251.chr9.nic@ENDOG	transcript4251.chr9.nic	protein_coding	128818498,128820739	128819185,128822677	Gene ID= ENSG00000167136.6 TPM= 4.67 Transcript Type= NA
chr9	128818474	128822677	128818474	128822677	+	ENST00000372642.4@ENDOG	ENST00000372642.4	protein_coding	128818474,128820739,128822328	128819185,128820848,128822677	Gene ID= ENSG00000167136.6 TPM= 47.87 Transcript Type= protein_coding
chr9	128819651	128829812	128819651	128829812	-	transcript4230.chr9.nnic@SPOUT1	transcript4230.chr9.nnic	protein_coding	128829745,128829110,128828735,128827032,128826540,128826384,128826022,128824977,128824771,128824072,128823747,128819651	128829812,128829155,128828860,128827191,128826629,128826433,128826152,128825049,128824869,128824174,128823863,128822833	Gene ID= ENSG00000198917.12 TPM= 8.17 Transcript Type= NA
chr9	128819651	128829821	128819651	128829821	-	ENST00000361256.9@SPOUT1	ENST00000361256.9	protein_coding	128829745,128829110,128828735,128827032,128826540,128826384,128826022,128824977,128824771,128824072,128823747,128819651	128829821,128829155,128828860,128827191,128826629,128826433,128826152,128825049,128824869,128824174,128823894,128822833	Gene ID= ENSG00000198917.12 TPM= 21.02 Transcript Type= protein_coding
chr9	128819651	128829812	128819651	128829812	-	transcript4237.chr9.nic@SPOUT1	transcript4237.chr9.nic	protein_coding	128829745,128829110,128828735,128827032,128826540,128826022,128824977,128824771,128824072,128823747,128819651	128829812,128829155,128828860,128827191,128826629,128826433,128825049,128824869,128824174,128823894,128822833	Gene ID= ENSG00000198917.12 TPM= 9.34 Transcript Type= NA
chr9	128822091	128829812	128822091	128829812	-	transcript4244.chr9.nic@SPOUT1	transcript4244.chr9.nic	protein_coding	128829745,128829110,128828735,128827032,128826540,128826384,128826022,128824977,128824771,128824072,128822091	128829812,128829155,128828860,128827191,128826629,128826433,128826152,128825049,128824869,128824174,128822833	Gene ID= ENSG00000198917.12 TPM= 7.01 Transcript Type= NA
chr9	128833113	128882087	128833113	128882087	-	transcript4256.chr9.nnic@KYAT1	transcript4256.chr9.nnic	protein_coding	128881897,128846680,128845353,128842654,128838218,128838051,128837685,128836802,128835997,128835779,128835481,128835323,128833740,128833113	128882087,128846859,128845411,128842801,128838367,128838137,128837813,128836922,128836073,128835868,128835667,128835402,128833826,128833643	Gene ID= ENSG00000171097.13 TPM= 2.92 Transcript Type= NA
chr9	128833113	128882053	128833113	128882053	-	ENST00000302586.7@KYAT1	ENST00000302586.7	protein_coding	128881897,128845353,128842654,128838218,128838051,128837685,128836802,128835997,128835779,128835481,128835323,128833740,128833113	128882053,128845411,128842801,128838367,128838137,128837813,128836922,128836073,128835868,128835667,128835402,128833826,128833643	Gene ID= ENSG00000171097.13 TPM= 7.59 Transcript Type= protein_coding
chr9	128862727	128881474	128862727	128881474	+	transcript4272.chr9.nnic@NA	transcript4272.chr9.nnic	NA	128862727,128865881,128881102	128862791,128866051,128881474	Gene ID= novel_gene_chr9_4273 TPM= 2.34 Transcript Type= NA
chr9	128882112	128918039	128882112	128918039	+	ENST00000372600.8@LRRC8A	ENST00000372600.8	protein_coding	128882112,128886015,128907157,128916096	128882250,128886121,128909321,128918039	Gene ID= ENSG00000136802.11 TPM= 171.17 Transcript Type= protein_coding
chr9	128882196	128918036	128882196	128918036	+	ENST00000372599.7@LRRC8A	ENST00000372599.7	protein_coding	128882196,128907157,128916096	128882250,128909321,128918036	Gene ID= ENSG00000136802.11 TPM= 14.71 Transcript Type= protein_coding
chr9	128897722	128901585	128897722	128901585	-	transcript4286.chr9.nnic@NA	transcript4286.chr9.nnic	NA	128897722	128901585	Gene ID= novel_gene_chr9_4287 TPM= 2.34 Transcript Type= NA
chr9	128945530	128947619	128945530	128947619	-	ENST00000372586.3@DOLK	ENST00000372586.3	protein_coding	128945530	128947619	Gene ID= ENSG00000175283.7 TPM= 52.54 Transcript Type= protein_coding
chr9	128947699	129007096	128947699	129007096	+	ENST00000372577.2@NUP188	ENST00000372577.2	protein_coding	128947699,128949189,128952773,128956350,128956952,128958010,128958802,128959015,128968506,128969400,128970758,128973160,128979262,128980606,128981264,128982549,128982902,128983293,128983474,128984900,128986558,128986809,128987589,128988047,128990120,128993197,128993525,128994373,128994856,128995319,128998151,128998538,128999172,128999624,129001529,129001884,129002817,129003317,129005147,129005303,129005645,129006050,129006239,129006502	128947751,128949243,128952846,128956434,128957032,128958054,128958894,128959134,128968717,128969514,128970958,128973249,128979327,128980725,128981390,128982701,128983028,128983380,128983550,128985014,128986678,128986875,128987717,128988186,128990226,128993403,128993694,128994442,128994923,128995514,128998228,128998623,128999317,128999805,129001729,129001976,129002975,129003454,129005221,129005530,129005776,129006123,129006368,129007096	Gene ID= ENSG00000095319.14 TPM= 75.89 Transcript Type= protein_coding
chr9	129008034	129028353	129008034	129028353	-	transcript4309.chr9.nic@SH3GLB2	transcript4309.chr9.nic	protein_coding	129028092,129022282,129021091,129014771,129014411,129010670,129010120,129009771,129009106,129008684,129008034	129028353,129022423,129021219,129014904,129014503,129012298,129010209,129009871,129009346,129008791,129008150	Gene ID= ENSG00000148341.17 TPM= 12.26 Transcript Type= NA
chr9	129008039	129028353	129008039	129028353	-	transcript4321.chr9.nic@SH3GLB2	transcript4321.chr9.nic	protein_coding	129028092,129022282,129021091,129014771,129014411,129010670,129010120,129009771,129009106,129008039	129028353,129022423,129021219,129014904,129014503,129012298,129010209,129009871,129009346,129008791	Gene ID= ENSG00000148341.17 TPM= 69.47 Transcript Type= NA
chr9	129008039	129028353	129008039	129028353	-	transcript4330.chr9.nic@SH3GLB2	transcript4330.chr9.nic	protein_coding	129028092,129022282,129021091,129014771,129014411,129010120,129009771,129009106,129008039	129028353,129022423,129021219,129014904,129014503,129012298,129009871,129009346,129008791	Gene ID= ENSG00000148341.17 TPM= 26.27 Transcript Type= NA
chr9	129007036	129028300	129007036	129028300	-	ENST00000372564.7@SH3GLB2	ENST00000372564.7	protein_coding	129028092,129022282,129021091,129014771,129014411,129012236,129010670,129010120,129009771,129009106,129007036	129028300,129022423,129021219,129014904,129014503,129012298,129010693,129010209,129009871,129009346,129008791	Gene ID= ENSG00000148341.17 TPM= 4.67 Transcript Type= protein_coding
chr9	129008039	129028279	129008039	129028279	-	ENST00000372554.8@SH3GLB2	ENST00000372554.8	protein_coding	129028092,129022282,129021091,129014771,129014411,129013008,129012236,129010670,129010120,129009771,129009453,129009106,129008039	129028279,129022423,129021219,129014904,129014503,129013019,129012298,129010693,129010209,129009871,129009467,129009346,129008791	Gene ID= ENSG00000148341.17 TPM= 15.18 Transcript Type= protein_coding
chr9	129036617	129072082	129036617	129072082	+	transcript4345.chr9.nic@MIGA2	transcript4345.chr9.nic	protein_coding	129036617,129040452,129042304,129048427,129049381,129049827,129059154,129060550,129061231,129063244,129063545,129067773,129068198,129069076,129069849,129070247	129036681,129040690,129042514,129048539,129049498,129049963,129059271,129060650,129061346,129063316,129063631,129067871,129068332,129069129,129069965,129072082	Gene ID= ENSG00000148343.18 TPM= 33.28 Transcript Type= NA
chr9	129036617	129072082	129036617	129072082	+	transcript4346.chr9.nic@MIGA2	transcript4346.chr9.nic	protein_coding	129036617,129040452,129042304,129048427,129049381,129049827,129059154,129060550,129061231,129063244,129063545,129067773,129068198,129069076,129069849,129070247	129036681,129040690,129042514,129048539,129049498,129049963,129059271,129060650,129061346,129063316,129063631,129067871,129068975,129069129,129069965,129072082	Gene ID= ENSG00000148343.18 TPM= 14.59 Transcript Type= NA
chr9	129081100	129090435	129081100	129090435	+	ENST00000372546.8@DOLPP1	ENST00000372546.8	protein_coding	129081100,129084668,129085023,129085207,129085518,129086139,129086709,129088971	129081207,129084768,129085107,129085306,129085616,129086267,129086798,129090435	Gene ID= ENSG00000167130.17 TPM= 18.1 Transcript Type= protein_coding
chr9	129081111	129090435	129081111	129090435	+	ENST00000406974.7@DOLPP1	ENST00000406974.7	protein_coding	129081111,129084668,129085023,129085207,129085518,129086709,129088971	129081207,129084768,129085107,129085306,129085616,129086798,129090435	Gene ID= ENSG00000167130.17 TPM= 2.92 Transcript Type= protein_coding
chr9	129094810	129110809	129094810	129110809	-	transcript4356.chr9.nic@CRAT	transcript4356.chr9.nic	protein_coding	129110483,129109179,129108763,129107814,129104188,129103013,129102400,129101883,129100511,129099866,129098531,129098249,129098013,129097250,129095998,129094810	129110809,129109277,129108903,129108077,129104306,129103066,129102565,129102057,129100689,129099966,129098650,129098371,129098148,129097312,129096135,129095612	Gene ID= ENSG00000095321.16 TPM= 4.09 Transcript Type= NA
chr9	129094810	129110804	129094810	129110804	-	ENST00000318080.6@CRAT	ENST00000318080.6	protein_coding	129110483,129107814,129104188,129103013,129102400,129101883,129100511,129099866,129098531,129098249,129098013,129097250,129095998,129094810	129110804,129108077,129104306,129103066,129102565,129102057,129100689,129099966,129098650,129098371,129098148,129097312,129096135,129095612	Gene ID= ENSG00000095321.16 TPM= 18.1 Transcript Type= protein_coding
chr9	129107333	129110809	129107333	129110809	-	transcript4361.chr9.nic@CRAT	transcript4361.chr9.nic	protein_coding	129110483,129109179,129107333	129110809,129109277,129108077	Gene ID= ENSG00000095321.16 TPM= 3.5 Transcript Type= NA
chr9	129110950	129148944	129110950	129148944	+	ENST00000358994.8@PTPA	ENST00000358994.8	protein_coding	129110950,129111472,129120513,129123052,129128985,129131522,129134795,129136471,129137592,129142445,129147387	129111032,129111631,129120610,129123138,129129110,129131639,129134894,129136595,129137692,129142552,129148944	Gene ID= ENSG00000119383.19 TPM= 15.76 Transcript Type= protein_coding
chr9	129111314	129148945	129111314	129148945	+	ENST00000337738.5@PTPA	ENST00000337738.5	protein_coding	129111314,129120513,129123052,129127964,129128985,129131522,129134795,129136471,129137592,129142445,129147387	129111631,129120610,129123138,129128068,129129110,129131639,129134894,129136595,129137692,129142552,129148945	Gene ID= ENSG00000119383.19 TPM= 17.51 Transcript Type= protein_coding
chr9	129111318	129148946	129111318	129148946	+	ENST00000393370.6@PTPA	ENST00000393370.6	protein_coding	129111318,129120513,129123052,129128985,129131522,129134795,129136471,129137592,129142445,129147387	129111631,129120610,129123138,129129110,129131639,129134894,129136595,129137692,129142552,129148946	Gene ID= ENSG00000119383.19 TPM= 70.64 Transcript Type= protein_coding
chr9	129175552	129178262	129175552	129178262	-	ENST00000372491.3@IER5L	ENST00000372491.3	protein_coding	129175552	129178262	Gene ID= ENSG00000188483.7 TPM= 7.01 Transcript Type= protein_coding
chr9	129321016	129324905	129321016	129324905	+	ENST00000316786.1@C9orf106	ENST00000316786.1	lincRNA	129321016,129321792	129321046,129324905	Gene ID= ENSG00000179082.3 TPM= 1.17 Transcript Type= lincRNA
chr9	129336899	129347464	129336899	129347464	+	transcript4386.chr9.nnic@LINC01503	transcript4386.chr9.nnic	lincRNA	129336899,129338792,129341350,129347226	129336988,129338917,129342043,129347464	Gene ID= ENSG00000233901.5 TPM= 3.5 Transcript Type= NA
chr9	129336879	129347464	129336879	129347464	+	ENST00000444125.1@LINC01503	ENST00000444125.1	lincRNA	129336879,129338792,129341736,129347226	129336988,129338917,129342043,129347464	Gene ID= ENSG00000233901.5 TPM= 1.17 Transcript Type= lincRNA
chr9	129488680	129503926	129488680	129503926	+	transcript4391.chr9.nic@LINC00963	transcript4391.chr9.nic	processed_transcript	129488680,129493419,129502397,129503323	129489299,129493595,129503139,129503926	Gene ID= ENSG00000204054.13 TPM= 3.5 Transcript Type= NA
chr9	129488545	129504274	129488545	129504274	+	ENST00000444184.5@LINC00963	ENST00000444184.5	processed_transcript	129488545,129493416,129503323	129489299,129493595,129504274	Gene ID= ENSG00000204054.13 TPM= 9.92 Transcript Type= lincRNA
chr9	129488667	129504274	129488667	129504274	+	transcript4406.chr9.nic@LINC00963	transcript4406.chr9.nic	processed_transcript	129488667,129493478,129503323	129489299,129493595,129504274	Gene ID= ENSG00000204054.13 TPM= 5.25 Transcript Type= NA
chr9	129491490	129493140	129491490	129493140	+	transcript4416.chr9.nnic@NA	transcript4416.chr9.nnic	NA	129491490	129493140	Gene ID= novel_gene_chr9_4417 TPM= 3.5 Transcript Type= NA
chr9	129494742	129496544	129494742	129496544	-	transcript4422.chr9.nnic@NA	transcript4422.chr9.nnic	NA	129494742	129496544	Gene ID= novel_gene_chr9_4423 TPM= 2.34 Transcript Type= NA
chr9	129504787	129506946	129504787	129506946	+	transcript4418.chr9.nnic@NA	transcript4418.chr9.nnic	NA	129504787	129506946	Gene ID= novel_gene_chr9_4419 TPM= 5.84 Transcript Type= NA
chr9	129506647	129508426	129506647	129508426	+	transcript4420.chr9.nnic@NA	transcript4420.chr9.nnic	NA	129506647	129508426	Gene ID= novel_gene_chr9_4421 TPM= 3.5 Transcript Type= NA
chr9	129626153	129636131	129626153	129636131	+	ENST00000611055.4@NTMT1	ENST00000611055.4	protein_coding	129626153,129632650,129634054,129635208	129626321,129632865,129634306,129636131	Gene ID= ENSG00000148335.14 TPM= 2.34 Transcript Type= protein_coding
chr9	129636892	129642161	129636892	129642161	-	transcript4424.chr9.nnic@ASB6	transcript4424.chr9.nnic	protein_coding	129641887,129640541,129639402,129639202,129638573,129637749,129636892	129642161,129640722,129639508,129639310,129638659,129638457,129637337	Gene ID= ENSG00000148331.11 TPM= 2.34 Transcript Type= NA
chr9	129636892	129642154	129636892	129642154	-	transcript4430.chr9.nic@ASB6	transcript4430.chr9.nic	protein_coding	129641887,129640541,129639402,129638573,129636892	129642154,129640722,129639508,129639310,129638457	Gene ID= ENSG00000148331.11 TPM= 8.76 Transcript Type= NA
chr9	129636892	129642165	129636892	129642165	-	ENST00000277458.4@ASB6	ENST00000277458.4	protein_coding	129641887,129640541,129639402,129639202,129638573,129636892	129642165,129640722,129639508,129639310,129638659,129638457	Gene ID= ENSG00000148331.11 TPM= 25.1 Transcript Type= protein_coding
chr9	129665641	129722674	129665641	129722674	+	ENST00000372469.5@PRRX2	ENST00000372469.5	protein_coding	129665641,129719231,129720596,129722217	129666126,129719418,129720774,129722674	Gene ID= ENSG00000167157.10 TPM= 3.5 Transcript Type= protein_coding
chr9	129738331	129753047	129738331	129753047	-	ENST00000340607.4@PTGES	ENST00000340607.4	protein_coding	129752887,129748655,129738331	129753047,129748737,129739860	Gene ID= ENSG00000148344.10 TPM= 3.5 Transcript Type= protein_coding
chr9	129803153	129811281	129803153	129811281	+	ENST00000259339.6@TOR1B	ENST00000259339.6	protein_coding	129803153,129804073,129807188,129808905,129809342	129803411,129804338,129807363,129809032,129811281	Gene ID= ENSG00000136816.15 TPM= 32.69 Transcript Type= protein_coding
chr9	129803149	129811281	129803149	129811281	+	transcript4483.chr9.nic@TOR1B	transcript4483.chr9.nic	protein_coding	129803149,129804073,129807188,129808905	129803411,129804338,129807363,129811281	Gene ID= ENSG00000136816.15 TPM= 7.01 Transcript Type= NA
chr9	129812944	129824134	129812944	129824134	-	ENST00000351698.4@TOR1A	ENST00000351698.4	protein_coding	129823908,129822581,129818745,129818520,129812944	129824134,129822846,129818920,129818647,129814222	Gene ID= ENSG00000136827.11 TPM= 44.37 Transcript Type= protein_coding
chr9	129827290	129835284	129827290	129835284	-	transcript4468.chr9.nic@C9orf78	transcript4468.chr9.nic	protein_coding	129835139,129833658,129833447,129831896,129830871,129829405,129829205,129827290	129835284,129833709,129833517,129831973,129831068,129829541,129829303,129828252	Gene ID= ENSG00000136819.15 TPM= 9.34 Transcript Type= NA
chr9	129827290	129835275	129827290	129835275	-	ENST00000372447.7@C9orf78	ENST00000372447.7	protein_coding	129835139,129834707,129833658,129833447,129831896,129830871,129829405,129829205,129827290	129835275,129834766,129833709,129833517,129831973,129831068,129829541,129829303,129828252	Gene ID= ENSG00000136819.15 TPM= 56.04 Transcript Type= protein_coding
chr9	129835453	129881828	129835453	129881828	+	transcript4448.chr9.nic@USP20	transcript4448.chr9.nic	protein_coding	129835453,129849813,129852540,129856307,129858050,129858467,129860937,129861543,129863186,129865303,129868005,129868862,129869310,129869672,129870453,129873482,129873699,129874576,129874829,129875310,129875560,129876130,129878338,129879573,129880113,129880379	129835499,129849924,129852636,129856360,129858112,129858598,129861033,129861612,129863299,129865381,129868449,129869002,129869425,129869844,129870547,129873515,129873744,129874756,129874955,129875479,129875641,129876238,129878440,129879644,129880289,129881828	Gene ID= ENSG00000136878.12 TPM= 17.51 Transcript Type= NA
chr9	129835446	129881838	129835446	129881838	+	ENST00000372429.7@USP20	ENST00000372429.7	protein_coding	129835446,129849813,129852540,129856307,129858050,129858467,129860937,129861543,129863186,129865303,129868005,129868862,129869310,129869672,129870453,129873482,129873699,129874576,129874829,129875310,129875560,129876130,129878338,129879573,129880113,129880467	129835499,129849924,129852636,129856360,129858112,129858598,129861033,129861612,129863299,129865381,129868449,129869002,129869425,129869844,129870547,129873515,129873744,129874756,129874955,129875479,129875641,129876238,129878440,129879644,129880289,129881838	Gene ID= ENSG00000136878.12 TPM= 33.86 Transcript Type= protein_coding
chr9	129895355	130043234	129895355	130043234	-	transcript4493.chr9.nic@FNBP1	transcript4493.chr9.nic	protein_coding	130042952,129994843,129979318,129978465,129958491,129957360,129929567,129927195,129924960,129923844,129915966,129908890,129902869,129900426,129899965,129895355	130043234,129994958,129979374,129978612,129958553,129957464,129929695,129927341,129925157,129924026,129915980,129908999,129903001,129900547,129900101,129895996	Gene ID= ENSG00000187239.16 TPM= 2.53 Transcript Type= NA
chr9	129895268	130043234	129895268	130043234	-	transcript4496.chr9.nic@FNBP1	transcript4496.chr9.nic	protein_coding	130042952,129994843,129979318,129978465,129958491,129957360,129929567,129927195,129924960,129923844,129908890,129902869,129900426,129899965,129895268	130043234,129994958,129979374,129978612,129958553,129957464,129929695,129927341,129925157,129924026,129908999,129903001,129900547,129900101,129895996	Gene ID= ENSG00000187239.16 TPM= 3.7 Transcript Type= NA
chr9	129895268	130043234	129895268	130043234	-	transcript4499.chr9.nic@FNBP1	transcript4499.chr9.nic	protein_coding	130042952,129994843,129979318,129978465,129958491,129957360,129929567,129927195,129924960,129908890,129902869,129900426,129899965,129895268	130043234,129994958,129979374,129978612,129958553,129957464,129929695,129927341,129925157,129908999,129903001,129900547,129900101,129895996	Gene ID= ENSG00000187239.16 TPM= 6.04 Transcript Type= NA
chr9	130053706	130140169	130053706	130140169	+	ENST00000372410.7@GPR107	ENST00000372410.7	protein_coding	130053706,130075636,130076412,130077299,130079630,130083565,130086420,130090876,130092248,130099457,130100629,130101106,130104420,130107496,130110370,130124915,130127483,130128640,130135025	130054073,130075749,130076462,130077378,130079769,130083602,130086476,130090983,130092381,130099532,130100702,130101223,130104550,130107539,130110426,130124964,130127566,130128761,130140169	Gene ID= ENSG00000148358.19 TPM= 8.76 Transcript Type= protein_coding
chr9	130053426	130140164	130053426	130140164	+	ENST00000347136.10@GPR107	ENST00000347136.10	protein_coding	130053426,130075636,130076412,130077299,130079630,130083565,130086420,130090876,130092248,130099457,130100629,130101106,130104420,130107496,130124915,130127483,130128640,130135025	130054073,130075749,130076462,130077378,130079769,130083602,130086476,130090983,130092381,130099532,130100702,130101223,130104550,130107539,130124964,130127566,130128761,130140164	Gene ID= ENSG00000148358.19 TPM= 12.26 Transcript Type= protein_coding
chr9	130444851	130496617	130444851	130496617	+	transcript4530.chr9.nic@ASS1	transcript4530.chr9.nic	protein_coding	130444851,130452224,130454305,130458401,130464111,130466725,130470834,130471485,130476871,130479716,130480385,130489333,130494867	130444995,130452333,130454373,130458589,130464167,130466799,130470904,130471515,130476961,130479800,130480449,130489464,130496617	Gene ID= ENSG00000130707.17 TPM= 3.5 Transcript Type= NA
chr9	130444929	130501274	130444929	130501274	+	ENST00000352480.9@ASS1	ENST00000352480.9	protein_coding	130444929,130452224,130454305,130458401,130464111,130466725,130470834,130471485,130476871,130479716,130480385,130489333,130494867,130499505,130500976	130444995,130452333,130454373,130458589,130464167,130466799,130470904,130471515,130476961,130479800,130480449,130489464,130495023,130499570,130501274	Gene ID= ENSG00000130707.17 TPM= 105.87 Transcript Type= protein_coding
chr9	130444988	130501255	130444988	130501255	+	ENST00000372393.7@ASS1	ENST00000372393.7	protein_coding	130444988,130450272,130452224,130454305,130458401,130464111,130466725,130470834,130471485,130476871,130479716,130480385,130489333,130494867,130499505,130500976	130444995,130450333,130452333,130454373,130458589,130464167,130466799,130470904,130471515,130476961,130479800,130480449,130489464,130495023,130499570,130501255	Gene ID= ENSG00000130707.17 TPM= 10.12 Transcript Type= protein_coding
chr9	130579565	130638352	130579565	130638352	+	transcript4540.chr9.nnic@FUBP3	transcript4540.chr9.nnic	protein_coding	130579565,130595483,130609954,130612456,130612956,130614288,130616355,130617797,130620354,130622708,130623611,130626364,130630628,130631557,130631942,130632202,130633619,130635999,130637014	130579764,130595588,130609987,130612505,130613027,130614345,130616517,130617895,130620458,130622810,130623711,130626505,130630788,130631630,130632022,130632278,130634738,130636126,130638352	Gene ID= ENSG00000107164.15 TPM= 5.84 Transcript Type= NA
chr9	130579565	130638352	130579565	130638352	+	transcript4544.chr9.nnic@FUBP3	transcript4544.chr9.nnic	protein_coding	130579565,130595483,130609954,130612456,130612956,130614288,130616355,130617797,130620354,130622708,130623611,130626364,130630628,130631557,130631942,130632202,130635999,130637014	130579764,130595588,130609987,130612505,130613027,130614345,130616517,130617895,130620458,130622810,130623711,130626505,130630788,130631630,130632022,130632278,130636126,130638352	Gene ID= ENSG00000107164.15 TPM= 31.53 Transcript Type= NA
chr9	130579584	130638352	130579584	130638352	+	transcript4545.chr9.nnic@FUBP3	transcript4545.chr9.nnic	protein_coding	130579584,130609954,130612456,130612956,130614288,130616355,130617797,130620354,130622708,130623611,130626364,130630628,130631557,130631942,130632202,130634667,130635999,130637014	130579764,130609987,130612505,130613027,130614345,130616517,130617895,130620458,130622810,130623711,130626505,130630788,130631630,130632022,130632278,130634738,130636126,130638352	Gene ID= ENSG00000107164.15 TPM= 3.5 Transcript Type= NA
chr9	130579606	130638352	130579606	130638352	+	ENST00000319725.9@FUBP3	ENST00000319725.9	protein_coding	130579606,130595483,130609954,130612456,130612956,130614288,130616355,130617797,130620354,130622708,130623611,130626364,130630628,130631557,130631942,130632202,130634667,130635999,130637014	130579764,130595588,130609987,130612505,130613027,130614345,130616517,130617895,130620458,130622810,130623711,130626505,130630788,130631630,130632022,130632278,130634738,130636126,130638352	Gene ID= ENSG00000107164.15 TPM= 94.58 Transcript Type= protein_coding
chr9	130693721	130704861	130693721	130704861	+	ENST00000372358.9@EXOSC2	ENST00000372358.9	protein_coding	130693721,130695492,130697582,130698162,130699329,130700867,130702134,130703053,130703694	130693913,130695593,130697627,130698251,130699394,130700935,130702310,130703181,130704861	Gene ID= ENSG00000130713.15 TPM= 4.67 Transcript Type= protein_coding
chr9	130835066	130887675	130835066	130887675	+	ENST00000318560.5@ABL1	ENST00000318560.5	protein_coding	130835066,130854064,130854801,130862763,130872129,130872860,130874868,130878415,130880068,130880500,130883969	130835525,130854237,130855096,130863035,130872213,130873037,130875052,130878567,130880157,130880664,130887675	Gene ID= ENSG00000097007.17 TPM= 38.92 Transcript Type= protein_coding
chr9	130878875	130887675	130878875	130887675	+	transcript4558.chr9.nic@ABL1	transcript4558.chr9.nic	protein_coding	130878875,130880500,130883969	130880157,130880664,130887675	Gene ID= ENSG00000097007.17 TPM= 18.48 Transcript Type= NA
chr9	130878875	130887675	130878875	130887675	+	transcript4559.chr9.nic@ABL1	transcript4559.chr9.nic	protein_coding	130878875,130883969	130880664,130887675	Gene ID= ENSG00000097007.17 TPM= 19.65 Transcript Type= NA
chr9	130900193	130903632	130900193	130903632	-	transcript4562.chr9.nnic@NA	transcript4562.chr9.nnic	NA	130900193	130903632	Gene ID= novel_gene_chr9_4563 TPM= 3.5 Transcript Type= NA
chr9	130902440	130938850	130902440	130938850	-	ENST00000372338.8@FIBCD1	ENST00000372338.8	protein_coding	130938536,130929567,130924237,130923744,130911792,130905234,130902440	130938850,130930046,130924396,130923880,130911888,130905413,130904323	Gene ID= ENSG00000130720.12 TPM= 3.5 Transcript Type= protein_coding
chr9	131009082	131093059	131009082	131093059	+	ENST00000361069.8@LAMC3	ENST00000361069.8	protein_coding	131009082,131026285,131032045,131036166,131038864,131039131,131041637,131045524,131049020,131052491,131052850,131056929,131061035,131066960,131068078,131068908,131069672,131071484,131072630,131073245,131075831,131077187,131079149,131082059,131085524,131087476,131087718,131091537	131009587,131026589,131032175,131036332,131039052,131039248,131041735,131045660,131049130,131052683,131052965,131057147,131061223,131067205,131068231,131069050,131069850,131071625,131072835,131073321,131075965,131077334,131079298,131082161,131085723,131087622,131087817,131093059	Gene ID= ENSG00000050555.17 TPM= 53.71 Transcript Type= protein_coding
chr9	131096542	131123145	131096542	131123145	+	ENST00000247291.7@AIF1L	ENST00000247291.7	protein_coding	131096542,131096802,131111597,131114577,131117756,131120235	131096660,131096863,131111663,131114618,131117918,131123145	Gene ID= ENSG00000126878.12 TPM= 17.51 Transcript Type= protein_coding
chr9	131125561	131234670	131125561	131234670	+	ENST00000359428.9@NUP214	ENST00000359428.9	protein_coding	131125561,131127524,131128332,131129279,131130766,131132596,131133106,131134898,131135940,131139281,131140549,131144280,131146129,131147490,131150324,131150616,131151736,131159383,131162991,131163870,131164061,131174055,131175460,131178311,131187289,131189053,131192208,131195233,131197216,131201647,131215212,131222778,131228160,131230630,131232284,131233454	131125749,131127719,131128483,131129477,131130836,131132659,131133209,131135004,131136006,131139407,131140710,131144754,131146304,131147584,131150410,131150765,131151894,131159486,131163173,131163955,131164144,131174318,131175621,131178410,131187364,131189131,131192292,131195294,131199015,131201717,131215368,131222930,131228331,131230769,131232308,131234670	Gene ID= ENSG00000126883.16 TPM= 15.18 Transcript Type= protein_coding
chr9	131207990	131211362	131207990	131211362	+	transcript4579.chr9.nnic@NA	transcript4579.chr9.nnic	NA	131207990	131211362	Gene ID= novel_gene_chr9_4580 TPM= 2.34 Transcript Type= NA
chr9	131258076	131276547	131258076	131276547	-	ENST00000372271.3@FAM78A	ENST00000372271.3	protein_coding	131275857,131258076	131276547,131261350	Gene ID= ENSG00000126882.12 TPM= 12.84 Transcript Type= protein_coding
chr9	131289694	131309262	131289694	131309262	+	ENST00000372264.3@PLPP7	ENST00000372264.3	protein_coding	131289694,131307923	131290448,131309262	Gene ID= ENSG00000160539.4 TPM= 5.84 Transcript Type= protein_coding
chr9	131394093	131500197	131394093	131500197	+	ENST00000405995.5@PRRC2B	ENST00000405995.5	protein_coding	131394093,131430090,131432617,131436620,131438989,131444185,131446401,131447085,131447662,131455076,131459164,131464763,131467563,131470788,131473508,131477744,131478474,131479252,131481726,131482371,131482710,131483359,131484686,131484948,131486085,131487167,131487856,131491425,131492169,131494405,131495740	131394263,131430259,131432794,131436722,131439061,131444328,131446642,131447206,131447804,131455166,131459356,131465078,131467753,131470983,131473724,131477949,131478619,131479393,131481808,131482562,131482907,131483445,131484790,131485140,131486182,131487294,131488096,131491580,131492260,131494486,131500197	Gene ID= ENSG00000130723.18 TPM= 42.03 Transcript Type= protein_coding
chr9	131414575	131417727	131414575	131417727	-	transcript4588.chr9.nnic@NA	transcript4588.chr9.nnic	NA	131414575	131417727	Gene ID= novel_gene_chr9_4589 TPM= 4.67 Transcript Type= NA
chr9	131488271	131490236	131488271	131490236	-	transcript4590.chr9.nnic@NA	transcript4590.chr9.nnic	NA	131488271	131490236	Gene ID= novel_gene_chr9_4591 TPM= 7.01 Transcript Type= NA
chr9	131502902	131523806	131502902	131523806	+	ENST00000423007.5@POMT1	ENST00000423007.5	protein_coding	131502902,131504189,131506114,131506403,131507368,131508911,131509743,131509903,131510260,131511337,131512041,131513239,131515426,131518445,131518837,131519389,131520080,131521346,131522047,131522932	131503313,131504340,131506220,131506453,131507514,131509022,131509808,131509996,131510415,131511467,131512136,131513331,131515522,131518537,131518957,131519486,131520193,131521472,131522224,131523806	Gene ID= ENSG00000130714.15 TPM= 10.27 Transcript Type= protein_coding
chr9	131502918	131523806	131502918	131523806	+	ENST00000341012.11@POMT1	ENST00000341012.11	protein_coding	131502918,131506114,131506403,131507368,131508911,131509743,131509903,131510260,131511337,131512041,131513239,131515426,131518445,131518837,131519389,131520080,131521346,131522047,131522932	131503073,131506220,131506453,131507514,131509022,131509808,131509996,131510415,131511467,131512136,131513331,131515522,131518537,131518957,131519486,131520193,131521472,131522224,131523806	Gene ID= ENSG00000130714.15 TPM= 7.94 Transcript Type= protein_coding
chr9	131502902	131523806	131502902	131523806	+	ENST00000404875.6@POMT1	ENST00000404875.6	protein_coding	131502902,131506403,131507368,131508911,131509743,131509903,131510260,131511337,131512041,131513239,131515426,131518445,131518837,131519389,131520080,131521346,131522047,131522932	131503073,131506453,131507514,131509022,131509808,131509996,131510415,131511467,131512136,131513331,131515522,131518537,131518957,131519486,131520193,131521472,131522224,131523806	Gene ID= ENSG00000130714.15 TPM= 7.94 Transcript Type= protein_coding
chr9	131502944	131523806	131502944	131523806	+	ENST00000402686.7@POMT1	ENST00000402686.7	protein_coding	131502944,131504189,131506114,131506403,131507368,131508911,131509743,131509903,131510260,131511337,131512041,131513239,131515426,131518445,131518837,131519389,131520080,131521346,131522047,131522932	131503073,131504340,131506220,131506453,131507514,131509022,131509808,131509996,131510415,131511467,131512136,131513331,131515522,131518537,131518957,131519486,131520193,131521472,131522224,131523806	Gene ID= ENSG00000130714.15 TPM= 31.29 Transcript Type= protein_coding
chr9	131502925	131523806	131502925	131523806	+	ENST00000372228.7@POMT1	ENST00000372228.7	protein_coding	131502925,131504189,131506114,131506403,131507368,131508911,131509743,131509903,131510260,131511337,131512041,131513239,131515426,131518445,131518837,131519389,131520080,131521346,131522047,131522932	131503073,131504340,131506220,131506453,131507514,131509022,131509808,131510062,131510415,131511467,131512136,131513331,131515522,131518537,131518957,131519486,131520193,131521472,131522224,131523806	Gene ID= ENSG00000130714.15 TPM= 6.77 Transcript Type= protein_coding
chr9	131523801	131531288	131523801	131531288	-	transcript4610.chr9.nnic@UCK1	transcript4610.chr9.nnic	protein_coding	131531067,131530486,131529488,131529128,131528944,131526445,131525929,131523801	131531288,131530645,131529584,131529270,131529038,131526506,131525977,131525221	Gene ID= ENSG00000130717.12 TPM= 2.72 Transcript Type= NA
chr9	131523801	131531268	131523801	131531268	-	ENST00000372215.4@UCK1	ENST00000372215.4	protein_coding	131531067,131530486,131529488,131529128,131528944,131525929,131523801	131531268,131530645,131529584,131529270,131529038,131525977,131525221	Gene ID= ENSG00000130717.12 TPM= 72.43 Transcript Type= protein_coding
chr9	131523801	131531241	131523801	131531241	-	transcript4615.chr9.nic@UCK1	transcript4615.chr9.nic	protein_coding	131531067,131530486,131529488,131529128,131528944,131525929,131523801	131531241,131530687,131529584,131529270,131529038,131525977,131525221	Gene ID= ENSG00000130717.12 TPM= 3.54 Transcript Type= NA
chr9	131523801	131531273	131523801	131531273	-	transcript4618.chr9.nic@UCK1	transcript4618.chr9.nic	protein_coding	131530486,131529488,131529128,131528944,131525929,131523801	131531273,131529584,131529270,131529038,131525977,131525221	Gene ID= ENSG00000130717.12 TPM= 5.87 Transcript Type= NA
chr9	131523801	131531226	131523801	131531226	-	transcript4620.chr9.nic@UCK1	transcript4620.chr9.nic	protein_coding	131531067,131530486,131529488,131528944,131525929,131523801	131531226,131530645,131529584,131529270,131525977,131525221	Gene ID= ENSG00000130717.12 TPM= 2.95 Transcript Type= NA
chr9	131523801	131531200	131523801	131531200	-	ENST00000372211.7@UCK1	ENST00000372211.7	protein_coding	131531094,131530486,131529488,131529128,131528944,131525929,131523801	131531200,131530687,131529584,131529270,131529038,131525977,131525221	Gene ID= ENSG00000130717.12 TPM= 3.54 Transcript Type= protein_coding
chr9	131576778	131740043	131576778	131740043	-	transcript4628.chr9.nic@RAPGEF1	transcript4628.chr9.nic	protein_coding	131739770,131650810,131650129,131643239,131638635,131630236,131629102,131628549,131627913,131625922,131621796,131603961,131602061,131598199,131596298,131592099,131589886,131588801,131587942,131587736,131584518,131584311,131582605,131580263,131576778	131740043,131650949,131650242,131643417,131638791,131630324,131629254,131628672,131628096,131626422,131621998,131604053,131602149,131598310,131596373,131592183,131589978,131588986,131588026,131587830,131584596,131584412,131582702,131580391,131579647	Gene ID= ENSG00000107263.18 TPM= 55.37 Transcript Type= NA
chr9	131576778	131740068	131576778	131740068	-	transcript4632.chr9.nic@RAPGEF1	transcript4632.chr9.nic	protein_coding	131739770,131650810,131643239,131638635,131630236,131629102,131628549,131627913,131625922,131621796,131602061,131598199,131596298,131592099,131589886,131588801,131587942,131587736,131584518,131584311,131582605,131580263,131576778	131740068,131650949,131643417,131638791,131630324,131629254,131628672,131628096,131626422,131621998,131602149,131598310,131596373,131592183,131589978,131588986,131588026,131587830,131584596,131584412,131582702,131580391,131579647	Gene ID= ENSG00000107263.18 TPM= 82.22 Transcript Type= NA
chr9	131576778	131590812	131576778	131590812	-	transcript4639.chr9.nic@RAPGEF1	transcript4639.chr9.nic	protein_coding	131589886,131588801,131587942,131587736,131584518,131584311,131582605,131580263,131576778	131590812,131588986,131588026,131587830,131584596,131584412,131582702,131580391,131579647	Gene ID= ENSG00000107263.18 TPM= 47.96 Transcript Type= NA
chr9	131649201	131740046	131649201	131740046	-	transcript4645.chr9.nic@RAPGEF1	transcript4645.chr9.nic	protein_coding	131739770,131649201	131740046,131650949	Gene ID= ENSG00000107263.18 TPM= 7.01 Transcript Type= NA
chr9	131576770	131740074	131576770	131740074	-	ENST00000372195.5@RAPGEF1	ENST00000372195.5	protein_coding	131739770,131650810,131650129,131643239,131638635,131630236,131629102,131628549,131627913,131625922,131621796,131602061,131598199,131596298,131592099,131589886,131588801,131587942,131587736,131584518,131584311,131582605,131580263,131576770	131740074,131650949,131650242,131643417,131638791,131630324,131629254,131628672,131628096,131626422,131621998,131602149,131598310,131596373,131592183,131589978,131588986,131588026,131587830,131584596,131584412,131582702,131580391,131579647	Gene ID= ENSG00000107263.18 TPM= 112.18 Transcript Type= protein_coding
chr9	131577885	131581547	131577885	131581547	+	transcript4649.chr9.nnic@NA	transcript4649.chr9.nnic	NA	131577885	131581547	Gene ID= novel_gene_chr9_4650 TPM= 2.34 Transcript Type= NA
chr9	131733817	131737678	131733817	131737678	+	transcript4651.chr9.nnic@NA	transcript4651.chr9.nnic	NA	131733817	131737678	Gene ID= novel_gene_chr9_4652 TPM= 2.34 Transcript Type= NA
chr9	131860107	132079908	131860107	132079908	-	ENST00000292035.9@MED27	ENST00000292035.9	protein_coding	132079642,132077442,132014337,131939381,131893885,131884058,131863063,131860107	132079908,132077586,132014467,131939474,131893992,131884099,131863140,131860672	Gene ID= ENSG00000160563.13 TPM= 19.85 Transcript Type= protein_coding
chr9	132073351	132079866	132073351	132079866	-	ENST00000474263.1@MED27	ENST00000474263.1	protein_coding	132079642,132077442,132073351	132079866,132077586,132073742	Gene ID= ENSG00000160563.13 TPM= 1.17 Transcript Type= protein_coding
chr9	132161698	132242831	132161698	132242831	+	transcript4663.chr9.nnic@NTNG2	transcript4663.chr9.nnic	protein_coding	132161698,132197966,132226849,132230572,132239104,132240910,132241876	132162239,132198609,132227021,132230595,132239271,132241044,132242831	Gene ID= ENSG00000196358.10 TPM= 7.01 Transcript Type= NA
chr9	132375621	132406845	132375621	132406845	-	transcript4677.chr9.nnic@TTF1	transcript4677.chr9.nnic	protein_coding	132406790,132401455,132400035,132398141,132396433,132392076,132390604,132388139,132386556,132379059,132375621	132406845,132402828,132400258,132398326,132396511,132392206,132390831,132388228,132386621,132379144,132376168	Gene ID= ENSG00000125482.12 TPM= 2.34 Transcript Type= NA
chr9	132375621	132406822	132375621	132406822	-	ENST00000334270.2@TTF1	ENST00000334270.2	protein_coding	132406790,132401455,132400035,132398141,132396433,132392076,132390597,132388139,132386556,132379059,132375621	132406822,132402828,132400258,132398326,132396511,132392206,132390831,132388228,132386621,132379144,132376168	Gene ID= ENSG00000125482.12 TPM= 9.34 Transcript Type= protein_coding
chr9	132594386	132670027	132594386	132670027	-	ENST00000438527.7@DDX31	ENST00000438527.7	protein_coding	132669860,132662439,132662261,132661208,132659710,132658671,132652448,132651075,132650234,132648432,132648189,132646823,132645895,132642004,132632041,132630264,132625664,132618330,132612087,132594386	132670027,132662695,132662336,132661251,132659780,132658735,132652492,132651116,132650298,132648551,132648295,132647058,132646071,132642063,132632091,132630403,132625745,132618441,132612255,132595112	Gene ID= ENSG00000125485.17 TPM= 1.17 Transcript Type= protein_coding
chr9	132670035	132694955	132670035	132694955	+	ENST00000372146.4@GTF3C4	ENST00000372146.4	protein_coding	132670035,132677977,132683563,132687239,132688881	132670955,132679803,132683693,132687327,132694955	Gene ID= ENSG00000125484.11 TPM= 11.68 Transcript Type= protein_coding
chr9	132878027	132890031	132878027	132890031	+	ENST00000372136.7@SPACA9	ENST00000372136.7	protein_coding	132878027,132883911,132887369,132888290	132878436,132884091,132887571,132890031	Gene ID= ENSG00000165698.15 TPM= 4.67 Transcript Type= protein_coding
chr9	132891348	132944621	132891348	132944621	-	ENST00000298552.7@TSC1	ENST00000298552.7	protein_coding	132944543,132935033,132928767,132927201,132925587,132923348,132921819,132921363,132912282,132911453,132911002,132910571,132907301,132906731,132905581,132904411,132903651,132902605,132901589,132900715,132897423,132897184,132891348	132944621,132935095,132928952,132927304,132925739,132923492,132921973,132921436,132912457,132911568,132911113,132910692,132907370,132906835,132906139,132904454,132903817,132902787,132901699,132900837,132897610,132897345,132896754	Gene ID= ENSG00000165699.13 TPM= 43.2 Transcript Type= protein_coding
chr9	133030708	133058503	133030708	133058503	+	transcript4708.chr9.nic@GTF3C5	transcript4708.chr9.nic	protein_coding	133030708,133042087,133043728,133050783,133052060,133053828,133054408,133054712,133054944,133056766,133057814	133031164,133042306,133043926,133050978,133052164,133053942,133054488,133054809,133056094,133056908,133058503	Gene ID= ENSG00000148308.17 TPM= 9.73 Transcript Type= NA
chr9	133030689	133058503	133030689	133058503	+	ENST00000372097.9@GTF3C5	ENST00000372097.9	protein_coding	133030689,133042087,133043728,133050783,133052060,133053828,133054408,133054712,133056012,133056766,133057814	133031164,133042306,133043926,133050978,133052164,133053942,133054488,133054809,133056094,133056908,133058503	Gene ID= ENSG00000148308.17 TPM= 31.91 Transcript Type= protein_coding
chr9	133030708	133058503	133030708	133058503	+	transcript4711.chr9.nic@GTF3C5	transcript4711.chr9.nic	protein_coding	133030708,133042087,133043728,133050783,133052060,133053828,133054408,133054712,133056012,133057814	133031164,133042306,133043926,133050978,133052164,133053942,133054488,133054809,133056908,133058503	Gene ID= ENSG00000148308.17 TPM= 9.34 Transcript Type= NA
chr9	133031045	133058503	133031045	133058503	+	transcript4712.chr9.nic@GTF3C5	transcript4712.chr9.nic	protein_coding	133031045,133043728,133050783,133052060,133053828,133054408,133054712,133054944,133056766,133057814	133031164,133043926,133050978,133052164,133053942,133054488,133054809,133056094,133056908,133058503	Gene ID= ENSG00000148308.17 TPM= 8.56 Transcript Type= NA
chr9	133097723	133149433	133097723	133149433	-	transcript4722.chr9.nic@RALGDS	transcript4722.chr9.nic	protein_coding	133148963,133112042,133110296,133109626,133108673,133107988,133107085,133106645,133105932,133104263,133103747,133103230,133102779,133102476,133101938,133101520,133100268,133097723	133149433,133112152,133110489,133109685,133108866,133108406,133107300,133106748,133106016,133104331,133103833,133103262,133102900,133102571,133102139,133101762,133100382,133098762	Gene ID= ENSG00000160271.14 TPM= 41.73 Transcript Type= NA
chr9	133097720	133121176	133097720	133121176	-	ENST00000372050.7@RALGDS	ENST00000372050.7	protein_coding	133120972,133112042,133110296,133109626,133108673,133107988,133107085,133106645,133105932,133104263,133103747,133103230,133102779,133102476,133101938,133101520,133100268,133097720	133121176,133112152,133110489,133109721,133108866,133108406,133107300,133106748,133106016,133104331,133103833,133103262,133102900,133102571,133102139,133101762,133100382,133098762	Gene ID= ENSG00000160271.14 TPM= 36.48 Transcript Type= protein_coding
chr9	133097720	133121176	133097720	133121176	-	ENST00000372047.7@RALGDS	ENST00000372047.7	protein_coding	133120972,133112042,133110296,133109626,133108673,133107988,133107085,133106645,133105932,133104263,133103747,133103230,133102779,133102476,133101938,133101520,133100268,133097720	133121176,133112152,133110489,133109685,133108866,133108406,133107300,133106748,133106016,133104331,133103833,133103262,133102900,133102571,133102139,133101762,133100382,133098762	Gene ID= ENSG00000160271.14 TPM= 21.3 Transcript Type= protein_coding
chr9	133152953	133163977	133152953	133163977	-	transcript4754.chr9.nnic@GBGT1	transcript4754.chr9.nnic	protein_coding	133163754,133162342,133161467,133156015,133155901,133155178,133152953	133163977,133162532,133161532,133156065,133155936,133155312,133154107	Gene ID= ENSG00000148288.11 TPM= 2.72 Transcript Type= NA
chr9	133152953	133163945	133152953	133163945	-	ENST00000372040.7@GBGT1	ENST00000372040.7	protein_coding	133163754,133162342,133161467,133156015,133155901,133155178,133152953	133163945,133162532,133161532,133156065,133155936,133155312,133154261	Gene ID= ENSG00000148288.11 TPM= 12.06 Transcript Type= protein_coding
chr9	133152953	133163919	133152953	133163919	-	ENST00000372043.7@GBGT1	ENST00000372043.7	protein_coding	133163754,133162342,133161467,133156015,133155901,133155178,133152953	133163919,133162532,133161532,133156065,133155936,133155312,133154242	Gene ID= ENSG00000148288.11 TPM= 1.55 Transcript Type= protein_coding
chr9	133328774	133336398	133328774	133336398	-	ENST00000372022.5@SURF6	ENST00000372022.5	protein_coding	133336039,133334392,133333718,133332548,133328774	133336398,133334601,133333806,133332760,133332348	Gene ID= ENSG00000148296.6 TPM= 24.52 Transcript Type= protein_coding
chr9	133340905	133348117	133340905	133348117	-	ENST00000610888.4@MED22	ENST00000610888.4	protein_coding	133347922,133346540,133345172,133340905	133348117,133346700,133345252,133344333	Gene ID= ENSG00000148297.15 TPM= 59.55 Transcript Type= protein_coding
chr9	133340905	133347494	133340905	133347494	-	transcript4786.chr9.nic@MED22	transcript4786.chr9.nic	protein_coding	133347160,133345172,133340905	133347494,133346700,133344333	Gene ID= ENSG00000148297.15 TPM= 19.85 Transcript Type= NA
chr9	133348214	133351426	133348214	133351426	+	ENST00000323345.10@RPL7A	ENST00000323345.10	protein_coding	133348214,133348922,133349551,133349912,133350240,133350597,133351002,133351262	133348246,133349042,133349700,133350052,133350319,133350727,133351071,133351426	Gene ID= ENSG00000148303.16 TPM= 375.97 Transcript Type= protein_coding
chr9	133351755	133356485	133351755	133356485	-	ENST00000371974.7@SURF1	ENST00000371974.7	protein_coding	133356400,133356269,133354824,133354659,133353749,133352694,133352446,133352061,133351755	133356485,133356320,133354957,133354741,133353940,133352766,133352608,133352142,133351982	Gene ID= ENSG00000148290.9 TPM= 71.81 Transcript Type= protein_coding
chr9	133351805	133356485	133351805	133356485	-	ENST00000615505.4@SURF1	ENST00000615505.4	protein_coding	133356400,133354824,133354659,133353749,133352694,133352446,133352061,133351805	133356485,133354957,133354741,133353940,133352766,133352608,133352142,133351982	Gene ID= ENSG00000148290.9 TPM= 30.94 Transcript Type= protein_coding
chr9	133356547	133361169	133356547	133361169	+	transcript4802.chr9.nic@SURF2	transcript4802.chr9.nic	protein_coding	133356547,133356914,133357711,133359950,133360265,133361056	133356670,133357182,133357814,133360129,133360434,133361169	Gene ID= ENSG00000148291.9 TPM= 2.34 Transcript Type= NA
chr9	133356552	133361169	133356552	133361169	+	ENST00000371964.4@SURF2	ENST00000371964.4	protein_coding	133356552,133356914,133357711,133359950,133360265,133361056	133356670,133357068,133357814,133360129,133360434,133361169	Gene ID= ENSG00000148291.9 TPM= 18.68 Transcript Type= protein_coding
chr9	133361450	133376166	133361450	133376166	-	ENST00000618229.4@SURF4	ENST00000618229.4	protein_coding	133375922,133375239,133367259,133366599,133365985,133364840,133361450	133376166,133375388,133367445,133366675,133366028,133365026,133363759	Gene ID= ENSG00000148248.13 TPM= 34.25 Transcript Type= protein_coding
chr9	133361450	133376166	133361450	133376166	-	ENST00000545297.5@SURF4	ENST00000545297.5	protein_coding	133375922,133367259,133366599,133365985,133361450	133376166,133367445,133366675,133366028,133363759	Gene ID= ENSG00000148248.13 TPM= 21.4 Transcript Type= protein_coding
chr9	133361449	133376099	133361449	133376099	-	ENST00000371989.7@SURF4	ENST00000371989.7	protein_coding	133375922,133367259,133366599,133365985,133364840,133361449	133376099,133367445,133366675,133366028,133365026,133363759	Gene ID= ENSG00000148248.13 TPM= 349.5 Transcript Type= protein_coding
chr9	133406062	133418044	133406062	133418044	-	ENST00000371942.7@REXO4	ENST00000371942.7	protein_coding	133417620,133414665,133412778,133412299,133410985,133408768,133407807,133406062	133418044,133415011,133412921,133412492,133411073,133408842,133407881,133407072	Gene ID= ENSG00000148300.11 TPM= 68.3 Transcript Type= protein_coding
chr9	133406058	133417989	133406058	133417989	-	transcript4815.chr9.nic@REXO4	transcript4815.chr9.nic	protein_coding	133417620,133414665,133412778,133412299,133410985,133408768,133406058	133417989,133415011,133412921,133412492,133411073,133408842,133407881	Gene ID= ENSG00000148300.11 TPM= 2.92 Transcript Type= NA
chr9	133459965	133470787	133459965	133470787	+	ENST00000540581.5@CACFD1	ENST00000540581.5	protein_coding	133459965,133463483,133465322,133467921,133468340,133468563	133460187,133463555,133465447,133468028,133468464,133470787	Gene ID= ENSG00000160325.14 TPM= 5.84 Transcript Type= protein_coding
chr9	133459978	133470763	133459978	133470763	+	transcript4829.chr9.nnic@CACFD1	transcript4829.chr9.nnic	protein_coding	133459978,133463407,133465322,133467921,133468563	133460187,133463555,133465447,133468028,133470763	Gene ID= ENSG00000160325.14 TPM= 22.18 Transcript Type= NA
chr9	133459967	133470848	133459967	133470848	+	ENST00000291722.11@CACFD1	ENST00000291722.11	protein_coding	133459967,133463483,133467921,133468563	133460187,133463555,133468028,133470848	Gene ID= ENSG00000160325.14 TPM= 9.34 Transcript Type= protein_coding
chr9	133461233	133470763	133461233	133470763	+	transcript4838.chr9.nic@CACFD1	transcript4838.chr9.nic	protein_coding	133461233,133465322,133467921,133468563	133463555,133465447,133468028,133470763	Gene ID= ENSG00000160325.14 TPM= 12.84 Transcript Type= NA
chr9	133471095	133479137	133471095	133479137	-	ENST00000371899.8@SLC2A6	ENST00000371899.8	protein_coding	133478968,133478254,133477035,133476237,133475400,133474961,133473980,133473415,133473105,133471095	133479137,133478416,133477241,133476336,133475611,133475113,133474088,133473600,133473250,133472176	Gene ID= ENSG00000160326.13 TPM= 18.1 Transcript Type= protein_coding
chr9	133471095	133479096	133471095	133479096	-	ENST00000371897.8@SLC2A6	ENST00000371897.8	protein_coding	133478968,133478254,133477035,133476237,133475400,133474961,133473980,133473105,133471095	133479096,133478416,133477241,133476336,133475611,133475113,133474088,133473250,133472176	Gene ID= ENSG00000160326.13 TPM= 5.25 Transcript Type= protein_coding
chr9	133534622	133575519	133534622	133575519	+	transcript4853.chr9.nnic@ADAMTSL2	transcript4853.chr9.nnic	protein_coding	133534622,133536712,133537405,133538349,133539771,133540598,133540878,133544470,133547038,133554357,133555558,133561198,133566936,133568273,133568603,133569408,133570331,133573843,133574746	133534917,133536802,133537547,133538424,133539873,133540743,133541001,133544550,133547213,133554693,133555930,133561295,133567062,133568486,133568758,133569578,133570507,133573987,133575519	Gene ID= ENSG00000197859.9 TPM= 14.4 Transcript Type= NA
chr9	133534309	133575519	133534309	133575519	+	ENST00000393061.7@ADAMTSL2	ENST00000393061.7	protein_coding	133534309,133536563,133537405,133538349,133539771,133540598,133540878,133544470,133547038,133554357,133555558,133561198,133566936,133568273,133568603,133569408,133570331,133573843,133574746	133534917,133536802,133537547,133538424,133539873,133540743,133541001,133544550,133547213,133554693,133555930,133561295,133567062,133568486,133568758,133569578,133570507,133573987,133575519	Gene ID= ENSG00000197859.9 TPM= 16.73 Transcript Type= protein_coding
chr9	133534853	133575518	133534853	133575518	+	ENST00000393060.1@ADAMTSL2	ENST00000393060.1	protein_coding	133534853,133536563,133537405,133538349,133539771,133540598,133540878,133544470,133547038,133554357,133555558,133561198,133566936,133568273,133568603,133569408,133570331,133573843,133574746	133534917,133536802,133537547,133538424,133539873,133540743,133541001,133544550,133547213,133554693,133555930,133561295,133567062,133568486,133568758,133569578,133570507,133573987,133575518	Gene ID= ENSG00000197859.9 TPM= 8.56 Transcript Type= protein_coding
chr9	133663564	133738357	133663564	133738357	-	ENST00000439388.5@SARDH	ENST00000439388.5	protein_coding	133738254,133733843,133732423,133731305,133730064,133729765,133718938,133717326,133713038,133712619,133708287,133704948,133702916,133696223,133694258,133690380,133685193,133671535,133670584,133666735,133663564	133738357,133734203,133732601,133731484,133730187,133729865,133719042,133717455,133713124,133712709,133708428,133705031,133703029,133696361,133694371,133690527,133685286,133671697,133670752,133666870,133664014	Gene ID= ENSG00000123453.17 TPM= 16.35 Transcript Type= protein_coding
chr9	133761894	133992814	133761894	133992814	-	transcript4862.chr9.nnic@VAV2	transcript4862.chr9.nnic	protein_coding	133992075,133939103,133861374,133834272,133812114,133809040,133807258,133806081,133797710,133796429,133795668,133791783,133789258,133788354,133787920,133785776,133784317,133783503,133780694,133779918,133778762,133777389,133776028,133774935,133771959,133770378,133768442,133761894	133992814,133939219,133861432,133834340,133812216,133809138,133807326,133806181,133797809,133796524,133795736,133791869,133789343,133788486,133787973,133785885,133784418,133783591,133780710,133779939,133778889,133777463,133776080,133775051,133772046,133770501,133768596,133764109	Gene ID= ENSG00000160293.16 TPM= 11.09 Transcript Type= NA
chr9	133761894	133992281	133761894	133992281	-	ENST00000406606.7@VAV2	ENST00000406606.7	protein_coding	133992075,133939103,133861374,133834272,133812114,133809040,133807258,133806081,133797710,133796429,133795668,133791783,133789258,133788354,133785776,133784317,133783503,133780694,133779918,133778762,133777389,133776028,133774935,133771959,133770378,133768442,133761894	133992281,133939219,133861432,133834340,133812216,133809138,133807326,133806181,133797809,133796524,133795736,133791869,133789343,133788486,133785885,133784418,133783591,133780710,133779939,133778889,133777463,133776080,133775051,133772046,133770501,133768596,133764109	Gene ID= ENSG00000160293.16 TPM= 19.27 Transcript Type= protein_coding
chr9	133855753	133860313	133855753	133860313	+	transcript4878.chr9.nnic@NA	transcript4878.chr9.nnic	NA	133855753	133860313	Gene ID= novel_gene_chr9_4879 TPM= 3.5 Transcript Type= NA
chr9	134027173	134030458	134027173	134030458	+	transcript4892.chr9.nnic@NA	transcript4892.chr9.nnic	NA	134027173	134030458	Gene ID= novel_gene_chr9_4893 TPM= 2.34 Transcript Type= NA
chr9	134032869	134068020	134032869	134068020	-	transcript4886.chr9.nnic@BRD3	transcript4886.chr9.nnic	protein_coding	134067945,134053265,134052306,134051562,134050374,134048083,134045293,134041760,134034701,134032869	134068020,134053590,134052443,134051709,134050588,134048454,134045421,134041951,134034829,134033705	Gene ID= ENSG00000169925.16 TPM= 3.5 Transcript Type= NA
chr9	134030305	134068017	134030305	134068017	-	ENST00000303407.11@BRD3	ENST00000303407.11	protein_coding	134067945,134053265,134052306,134051562,134050374,134048083,134045293,134041760,134040034,134036032,134034701,134030305	134068017,134053590,134052443,134051709,134050588,134048454,134045421,134041951,134040269,134036324,134034829,134033705	Gene ID= ENSG00000169925.16 TPM= 38.53 Transcript Type= protein_coding
chr9	134061270	134064389	134061270	134064389	+	transcript4890.chr9.nnic@NA	transcript4890.chr9.nnic	NA	134061270	134064389	Gene ID= novel_gene_chr9_4891 TPM= 2.34 Transcript Type= NA
chr9	134136088	134159968	134136088	134159968	+	ENST00000358625.3@WDR5	ENST00000358625.3	protein_coding	134136088,134139820,134140703,134141510,134141949,134142333,134142636,134148288,134151983,134154466,134155340,134155693,134156506,134157893	134136200,134139958,134140811,134141583,134142038,134142422,134142719,134148343,134152029,134154541,134155373,134155767,134156593,134159968	Gene ID= ENSG00000196363.9 TPM= 25.69 Transcript Type= protein_coding
chr9	134373103	134436781	134373103	134436781	+	transcript4900.chr9.nnic@RXRA	transcript4900.chr9.nnic	protein_coding	134373103,134374007,134401632,134408149,134408940,134417158,134421676,134429108,134431905,134434102,134436467	134373180,134374130,134401882,134408299,134409119,134417327,134421805,134429240,134431996,134434207,134436781	Gene ID= ENSG00000186350.9 TPM= 5.84 Transcript Type= NA
chr9	134326580	134437019	134326580	134437019	+	ENST00000481739.1@RXRA	ENST00000481739.1	protein_coding	134326580,134401632,134408149,134408940,134417158,134421676,134429108,134431905,134434102,134436467	134326659,134401882,134408299,134409119,134417327,134421805,134429240,134431996,134434207,134437019	Gene ID= ENSG00000186350.9 TPM= 5.84 Transcript Type= protein_coding
chr9	134641774	134844843	134641774	134844843	+	ENST00000371817.7@COL5A1	ENST00000371817.7	protein_coding	134641774,134690912,134699909,134701171,134727266,134728670,134730236,134731496,134732071,134738474,134738746,134750542,134750790,134752589,134753850,134754273,134756765,134758243,134761925,134763693,134765681,134766454,134767000,134767310,134768410,134772790,134774859,134780102,134782667,134784989,134785995,134789155,134795082,134795262,134796374,134796848,134798408,134801954,134802888,134804975,134805161,134806189,134809183,134810255,134811339,134811492,134812449,134812605,134813983,134814797,134815576,134815935,134817026,134817778,134818656,134818848,134819000,134820116,134822097,134822998,134823416,134824600,134825792,134829976,134834971,134842157	134642296,134691079,134700122,134701333,134727397,134728807,134730475,134731663,134732127,134738515,134738808,134750616,134750882,134752645,134753903,134754326,134756818,134758296,134761978,134763737,134765734,134766498,134767053,134767354,134768463,134772834,134774912,134780146,134782720,134785096,134786048,134789208,134795126,134795315,134796418,134796901,134798461,134802007,134802995,134805064,134805214,134806296,134809290,134810308,134811392,134811599,134812502,134812712,134814036,134814904,134815629,134815988,134817079,134817831,134818763,134818901,134819053,134820223,134822150,134823033,134823469,134824855,134825904,134830044,134835204,134844843	Gene ID= ENSG00000130635.15 TPM= 17.51 Transcript Type= protein_coding
chr9	134909585	134917963	134909585	134917963	-	ENST00000371806.3@FCN1	ENST00000371806.3	protein_coding	134917769,134916348,134914756,134914385,134913581,134913016,134912486,134911133,134909585	134917963,134916461,134914809,134914420,134913613,134913143,134912615,134911267,134910045	Gene ID= ENSG00000085265.10 TPM= 109.75 Transcript Type= protein_coding
chr9	135075520	135121178	135075520	135121178	+	ENST00000252854.8@OLFM1	ENST00000252854.8	protein_coding	135075520,135090195,135095864,135098286,135106749,135119504	135075802,135090344,135096019,135098505,135106855,135121178	Gene ID= ENSG00000130558.19 TPM= 17.51 Transcript Type= protein_coding
chr9	135087674	135098065	135087674	135098065	+	ENST00000392991.8@OLFM1	ENST00000392991.8	protein_coding	135087674,135090195,135095864,135097781	135088139,135090344,135096019,135098065	Gene ID= ENSG00000130558.19 TPM= 3.5 Transcript Type= protein_coding
chr9	135380239	135384692	135380239	135384692	-	transcript4933.chr9.nnic@NA	transcript4933.chr9.nnic	NA	135380239	135384692	Gene ID= novel_gene_chr9_4934 TPM= 3.5 Transcript Type= NA
chr9	135479678	135488893	135479678	135488893	+	transcript4939.chr9.nnic@PPP1R26	transcript4939.chr9.nnic	protein_coding	135479678,135482683,135483950,135484449	135479724,135482815,135484082,135488893	Gene ID= ENSG00000196422.10 TPM= 12.26 Transcript Type= NA
chr9	135479663	135488893	135479663	135488893	+	ENST00000604351.5@PPP1R26	ENST00000604351.5	protein_coding	135479663,135483950,135484449	135479724,135484082,135488893	Gene ID= ENSG00000196422.10 TPM= 9.92 Transcript Type= protein_coding
chr9	135479817	135488893	135479817	135488893	+	transcript4948.chr9.nnic@PPP1R26	transcript4948.chr9.nnic	protein_coding	135479817,135483950,135484449	135480022,135484082,135488893	Gene ID= ENSG00000196422.10 TPM= 12.26 Transcript Type= NA
chr9	135481237	135488894	135481237	135488894	+	transcript4949.chr9.nic@PPP1R26	transcript4949.chr9.nic	protein_coding	135481237,135483950	135482815,135488894	Gene ID= ENSG00000196422.10 TPM= 14.01 Transcript Type= NA
chr9	135479802	135488893	135479802	135488893	+	ENST00000356818.6@PPP1R26	ENST00000356818.6	protein_coding	135479802,135482683,135483950,135484449	135480022,135482815,135484082,135488893	Gene ID= ENSG00000196422.10 TPM= 28.61 Transcript Type= protein_coding
chr9	135500631	135504672	135500631	135504672	+	ENST00000241600.9@MRPS2	ENST00000241600.9	protein_coding	135500631,135500998,135501844,135503542	135500753,135501123,135501973,135504672	Gene ID= ENSG00000122140.10 TPM= 50.21 Transcript Type= protein_coding
chr9	135932969	135961410	135932969	135961410	-	transcript4963.chr9.nnic@UBAC1	transcript4963.chr9.nnic	protein_coding	135961025,135955295,135953680,135947798,135946944,135946269,135945889,135945028,135939673,135938222,135932969	135961410,135955415,135953753,135947905,135947055,135946371,135945997,135945250,135939759,135938360,135933515	Gene ID= ENSG00000130560.8 TPM= 4.67 Transcript Type= NA
chr9	135932969	135961410	135932969	135961410	-	transcript4970.chr9.nic@UBAC1	transcript4970.chr9.nic	protein_coding	135961025,135955295,135953680,135946269,135945889,135945028,135939673,135938222,135932969	135961410,135955415,135953753,135947905,135945997,135945250,135939759,135938360,135933515	Gene ID= ENSG00000130560.8 TPM= 5.84 Transcript Type= NA
chr9	135932969	135961347	135932969	135961347	-	transcript4971.chr9.nic@UBAC1	transcript4971.chr9.nic	protein_coding	135961025,135955295,135953680,135947798,135946269,135945028,135939673,135938222,135932969	135961347,135955415,135953753,135947905,135946371,135945997,135939759,135938360,135933515	Gene ID= ENSG00000130560.8 TPM= 3.5 Transcript Type= NA
chr9	135932969	135961410	135932969	135961410	-	transcript4974.chr9.nic@UBAC1	transcript4974.chr9.nic	protein_coding	135961025,135955295,135953680,135946269,135945028,135939673,135938222,135932969	135961410,135955415,135953753,135947905,135945997,135939759,135938360,135933515	Gene ID= ENSG00000130560.8 TPM= 5.84 Transcript Type= NA
chr9	135932969	135961380	135932969	135961380	-	ENST00000371756.3@UBAC1	ENST00000371756.3	protein_coding	135961025,135955295,135953680,135947798,135946269,135945889,135945028,135939673,135938222,135932969	135961380,135955415,135953753,135947905,135946371,135945997,135945250,135939759,135938360,135933515	Gene ID= ENSG00000130560.8 TPM= 100.41 Transcript Type= protein_coding
chr9	136012653	136095312	136012653	136095312	-	transcript4979.chr9.nic@NACC2	transcript4979.chr9.nic	protein_coding	136095189,136049636,136016265,136013864,136012653	136095312,136050580,136016429,136013969,136013296	Gene ID= ENSG00000148411.7 TPM= 2.34 Transcript Type= NA
chr9	136006537	136095285	136006537	136095285	-	ENST00000277554.3@NACC2	ENST00000277554.3	protein_coding	136095189,136049636,136016265,136013864,136013199,136006537	136095285,136050580,136016429,136013969,136013296,136012024	Gene ID= ENSG00000148411.7 TPM= 105.08 Transcript Type= protein_coding
chr9	136079060	136082508	136079060	136082508	-	transcript4983.chr9.nnic@NA	transcript4983.chr9.nnic	NA	136079060	136082508	Gene ID= novel_gene_chr9_4984 TPM= 4.67 Transcript Type= NA
chr9	136089773	136093953	136089773	136093953	-	transcript4981.chr9.nnic@NA	transcript4981.chr9.nnic	NA	136089773	136093953	Gene ID= novel_gene_chr9_4982 TPM= 5.84 Transcript Type= NA
chr9	136107808	136109081	136107808	136109081	-	ENST00000566567.1@AL138781.1	ENST00000566567.1	lincRNA	136107808	136109081	Gene ID= ENSG00000260193.1 TPM= 1.17 Transcript Type= lincRNA
chr9	136114581	136118863	136114581	136118863	-	ENST00000418388.5@TMEM250	ENST00000418388.5	protein_coding	136118485,136114581	136118863,136117024	Gene ID= ENSG00000238227.7 TPM= 180.39 Transcript Type= protein_coding
chr9	136114589	136118534	136114589	136118534	-	ENST00000557985.2@TMEM250	ENST00000557985.2	protein_coding	136118485,136115456,136114589	136118534,136117024,136114950	Gene ID= ENSG00000238227.7 TPM= 12.26 Transcript Type= nonsense_mediated_decay
chr9	136327476	136359605	136327476	136359605	+	ENST00000440944.5@GPSM1	ENST00000440944.5	protein_coding	136327476,136334447,136335966,136336921,136337441,136337846,136338555,136339707,136340870,136348697,136349587,136355690,136356342,136358014	136327763,136334668,136336101,136337072,136337564,136337961,136338710,136339815,136340993,136348767,136349763,136355846,136356550,136359605	Gene ID= ENSG00000160360.12 TPM= 86.4 Transcript Type= protein_coding
chr9	136327476	136341836	136327476	136341836	+	ENST00000616132.4@GPSM1	ENST00000616132.4	protein_coding	136327476,136334447,136335966,136336921,136337441,136337846,136338555,136339707,136340870	136327763,136334668,136336101,136337072,136337564,136337961,136338710,136339815,136341836	Gene ID= ENSG00000160360.12 TPM= 4.67 Transcript Type= protein_coding
chr9	136361900	136363789	136361900	136363789	-	ENST00000371738.3@DNLZ	ENST00000371738.3	protein_coding	136363487,136362989,136361900	136363789,136363128,136362180	Gene ID= ENSG00000213221.4 TPM= 24.52 Transcript Type= protein_coding
chr9	136363956	136373681	136363956	136373681	-	ENST00000371732.9@CARD9	ENST00000371732.9	protein_coding	136373532,136371895,136371324,136370841,136370522,136370294,136369750,136367637,136367216,136366800,136365141,136364483,136363956	136373681,136372094,136371461,136371145,136370701,136370437,136369875,136367828,136367257,136366845,136365217,136364559,136364401	Gene ID= ENSG00000187796.14 TPM= 8.76 Transcript Type= protein_coding
chr9	136363956	136373671	136363956	136373671	-	transcript5003.chr9.nnic@CARD9	transcript5003.chr9.nnic	protein_coding	136373532,136371895,136371324,136370841,136370522,136370294,136369750,136367637,136367216,136366800,136364483,136363956	136373671,136372094,136371461,136371145,136370701,136370437,136369875,136367828,136367257,136366845,136364559,136364401	Gene ID= ENSG00000187796.14 TPM= 2.92 Transcript Type= NA
chr9	136375577	136378994	136375577	136378994	-	transcript5015.chr9.nic@SNAPC4	transcript5015.chr9.nic	protein_coding	136376349,136375577	136378994,136375800	Gene ID= ENSG00000165684.4 TPM= 7.01 Transcript Type= NA
chr9	136401925	136410611	136401925	136410611	-	transcript5032.chr9.nic@SDCCAG3	transcript5032.chr9.nic	protein_coding	136410328,136408999,136407826,136407145,136405905,136405091,136404631,136404055,136401925	136410611,136409067,136407938,136407561,136405978,136405202,136404693,136404194,136402887	Gene ID= ENSG00000165689.16 TPM= 4.47 Transcript Type= NA
chr9	136401925	136410609	136401925	136410609	-	ENST00000298537.11@SDCCAG3	ENST00000298537.11	protein_coding	136410328,136410090,136407826,136407145,136405905,136405091,136404631,136404055,136401925	136410609,136410239,136407938,136407561,136405978,136405202,136404693,136404194,136402887	Gene ID= ENSG00000165689.16 TPM= 3.3 Transcript Type= protein_coding
chr9	136402665	136410612	136402665	136410612	-	transcript5036.chr9.nic@SDCCAG3	transcript5036.chr9.nic	protein_coding	136410328,136409874,136407826,136407145,136405905,136405091,136404631,136404055,136402665	136410612,136410239,136407938,136407561,136405978,136405202,136404693,136404194,136402887	Gene ID= ENSG00000165689.16 TPM= 2.34 Transcript Type= NA
chr9	136401925	136410614	136401925	136410614	-	transcript5037.chr9.nic@SDCCAG3	transcript5037.chr9.nic	protein_coding	136410328,136407826,136406946,136405905,136405091,136404631,136404055,136401925	136410614,136407938,136407561,136405978,136405202,136404693,136404194,136402887	Gene ID= ENSG00000165689.16 TPM= 4.09 Transcript Type= NA
chr9	136401951	136410600	136401951	136410600	-	ENST00000371725.7@SDCCAG3	ENST00000371725.7	protein_coding	136410328,136407826,136407145,136405905,136405091,136404631,136404055,136401951	136410600,136407938,136407561,136405978,136405202,136404693,136404194,136402887	Gene ID= ENSG00000165689.16 TPM= 12.84 Transcript Type= protein_coding
chr9	136401922	136410527	136401922	136410527	-	ENST00000357365.7@SDCCAG3	ENST00000357365.7	protein_coding	136410328,136410090,136408999,136407826,136407145,136405905,136405091,136404631,136404055,136401922	136410527,136410239,136409067,136407938,136407561,136405978,136405202,136404693,136404194,136402887	Gene ID= ENSG00000165689.16 TPM= 3.3 Transcript Type= protein_coding
chr9	136410570	136423761	136410570	136423761	+	ENST00000371717.7@PMPCA	ENST00000371717.7	protein_coding	136410570,136411997,136412490,136412810,136414553,136416291,136416951,136418017,136418555,136418828,136419044,136421832,136423095	136410739,136412199,136412569,136412892,136414647,136416391,136417214,136418109,136418673,136418918,136419106,136421976,136423761	Gene ID= ENSG00000165688.11 TPM= 96.91 Transcript Type= protein_coding
chr9	136410636	136423761	136410636	136423761	+	transcript5022.chr9.nic@PMPCA	transcript5022.chr9.nic	protein_coding	136410636,136411997,136412490,136412810,136414553,136416291,136418017,136418555,136418828,136419044,136421832,136423095	136410739,136412199,136412569,136412892,136414647,136417214,136418109,136418673,136418918,136419106,136421976,136423761	Gene ID= ENSG00000165688.11 TPM= 18.68 Transcript Type= NA
chr9	136410636	136423760	136410636	136423760	+	transcript5024.chr9.nic@PMPCA	transcript5024.chr9.nic	protein_coding	136410636,136411997,136412490,136412810,136414553,136416291,136418017,136418555,136418828,136419044,136421832	136410739,136412199,136412569,136412892,136414647,136417214,136418109,136418673,136418918,136419106,136423760	Gene ID= ENSG00000165688.11 TPM= 5.84 Transcript Type= NA
chr9	136428619	136439880	136428619	136439880	-	transcript5054.chr9.nnic@INPP5E	transcript5054.chr9.nnic	protein_coding	136438608,136434740,136434037,136433155,136432956,136432316,136431824,136431002,136430277,136428619	136439880,136434863,136434134,136433279,136433075,136432586,136431985,136431117,136430413,136429807	Gene ID= ENSG00000148384.12 TPM= 2.34 Transcript Type= NA
chr9	136428619	136439880	136428619	136439880	-	transcript5063.chr9.nic@INPP5E	transcript5063.chr9.nic	protein_coding	136438608,136434740,136434037,136433155,136432956,136431824,136431002,136430277,136428619	136439880,136434863,136434134,136433279,136433075,136432586,136431117,136430413,136429807	Gene ID= ENSG00000148384.12 TPM= 5.84 Transcript Type= NA
chr9	136428625	136439880	136428625	136439880	-	transcript5064.chr9.nnic@INPP5E	transcript5064.chr9.nnic	protein_coding	136438608,136434740,136434037,136433155,136432956,136432479,136431824,136431002,136428625	136439880,136434863,136434134,136433279,136433075,136432586,136431985,136431117,136429807	Gene ID= ENSG00000148384.12 TPM= 3.5 Transcript Type= NA
chr9	136428619	136439880	136428619	136439880	-	transcript5065.chr9.nic@INPP5E	transcript5065.chr9.nic	protein_coding	136438608,136434740,136433155,136432956,136431824,136431002,136430277,136428619	136439880,136434863,136434134,136433075,136432586,136431117,136430413,136429807	Gene ID= ENSG00000148384.12 TPM= 7.01 Transcript Type= NA
chr9	136428619	136439822	136428619	136439822	-	ENST00000371712.3@INPP5E	ENST00000371712.3	protein_coding	136438608,136434740,136434037,136433155,136432956,136432479,136431824,136431002,136430277,136428619	136439822,136434863,136434134,136433279,136433075,136432586,136431985,136431117,136430413,136429807	Gene ID= ENSG00000148384.12 TPM= 38.53 Transcript Type= protein_coding
chr9	136437324	136438733	136437324	136438733	-	transcript5070.chr9.nnic@NA	transcript5070.chr9.nnic	NA	136437324	136438733	Gene ID= novel_gene_chr9_5071 TPM= 2.34 Transcript Type= NA
chr9	136546209	136549743	136546209	136549743	+	transcript5080.chr9.nnic@NA	transcript5080.chr9.nnic	NA	136546209	136549743	Gene ID= novel_gene_chr9_5081 TPM= 3.5 Transcript Type= NA
chr9	136546414	136549743	136546414	136549743	+	transcript5078.chr9.nnic@NALT1	transcript5078.chr9.nnic	antisense_RNA	136546414,136547842,136548744,136549132	136547557,136548101,136548808,136549743	Gene ID= ENSG00000237886.1 TPM= 3.5 Transcript Type= NA
chr9	136648610	136660421	136648610	136660421	-	ENST00000411904.1@HSPC324	ENST00000411904.1	antisense_RNA	136660321,136648610	136660421,136649065	Gene ID= ENSG00000228401.4 TPM= 2.34 Transcript Type= antisense_RNA
chr9	136658856	136672678	136658856	136672678	+	ENST00000371699.5@EGFL7	ENST00000371699.5	protein_coding	136658856,136664692,136668241,136668557,136669606,136669914,136670169,136670950,136671926,136672264	136659630,136664785,136668362,136668673,136669721,136670009,136670330,136671014,136672088,136672678	Gene ID= ENSG00000172889.15 TPM= 14.03 Transcript Type= protein_coding
chr9	136662915	136672678	136662915	136672678	+	transcript5099.chr9.nnic@EGFL7	transcript5099.chr9.nnic	protein_coding	136662915,136664692,136668241,136668557,136669914,136670169,136670950,136671926,136672264	136663108,136664785,136668362,136668673,136670009,136670330,136671014,136672088,136672678	Gene ID= ENSG00000172889.15 TPM= 20.95 Transcript Type= NA
chr9	136662915	136672678	136662915	136672678	+	transcript5103.chr9.nic@EGFL7	transcript5103.chr9.nic	protein_coding	136662915,136664692,136668557,136669606,136669914,136670169,136670950,136671926,136672264	136663108,136664785,136668673,136669721,136670009,136670330,136671014,136672088,136672678	Gene ID= ENSG00000172889.15 TPM= 63.54 Transcript Type= NA
chr9	136662900	136672678	136662900	136672678	+	transcript5119.chr9.nnic@EGFL7	transcript5119.chr9.nnic	protein_coding	136662900,136664692,136668557,136669914,136670169,136670950,136671926,136672264	136663108,136664785,136668673,136670009,136670330,136671014,136672088,136672678	Gene ID= ENSG00000172889.15 TPM= 37.29 Transcript Type= NA
chr9	136662930	136672678	136662930	136672678	+	ENST00000406555.7@EGFL7	ENST00000406555.7	protein_coding	136662930,136664692,136668241,136668557,136669606,136669914,136670169,136670950,136671926,136672264	136663108,136664785,136668362,136668673,136669721,136670009,136670330,136671014,136672088,136672678	Gene ID= ENSG00000172889.15 TPM= 224.2 Transcript Type= protein_coding
chr9	136662927	136672677	136662927	136672677	+	ENST00000308874.11@EGFL7	ENST00000308874.11	protein_coding	136662927,136663408,136664692,136668241,136668557,136669606,136669914,136670169,136670950,136671926,136672264	136663108,136663623,136664785,136668362,136668673,136669721,136670009,136670330,136671014,136672088,136672677	Gene ID= ENSG00000172889.15 TPM= 11.55 Transcript Type= protein_coding
chr9	136665792	136672678	136665792	136672678	+	ENST00000371698.3@EGFL7	ENST00000371698.3	protein_coding	136665792,136668241,136668557,136669606,136669914,136670169,136670950,136671926,136672264	136665817,136668362,136668673,136669721,136670009,136670330,136671014,136672088,136672678	Gene ID= ENSG00000172889.15 TPM= 35.05 Transcript Type= protein_coding
chr9	136668808	136672677	136668808	136672677	+	transcript5143.chr9.nnic@NA	transcript5143.chr9.nnic	NA	136668808	136672677	Gene ID= novel_gene_chr9_5144 TPM= 45.54 Transcript Type= NA
chr9	136673143	136687442	136673143	136687442	-	transcript5150.chr9.nic@AGPAT2	transcript5150.chr9.nic	protein_coding	136687176,136676961,136676585,136674735,136673143	136687442,136677556,136676680,136674807,136673927	Gene ID= ENSG00000169692.12 TPM= 41.45 Transcript Type= NA
chr9	136673143	136687423	136673143	136687423	-	ENST00000371696.6@AGPAT2	ENST00000371696.6	protein_coding	136687176,136677423,136676961,136676585,136674735,136673143	136687423,136677556,136677136,136676680,136674807,136673927	Gene ID= ENSG00000169692.12 TPM= 587.88 Transcript Type= protein_coding
chr9	136673143	136687398	136673143	136687398	-	ENST00000371694.7@AGPAT2	ENST00000371694.7	protein_coding	136687176,136677423,136676961,136674735,136673143	136687398,136677556,136677136,136674807,136673927	Gene ID= ENSG00000169692.12 TPM= 29.77 Transcript Type= protein_coding
chr9	136712517	136724716	136712517	136724716	+	transcript5166.chr9.nnic@FAM69B	transcript5166.chr9.nnic	protein_coding	136712517,136717577,136721679,136722125,136722962	136712728,136717711,136722028,136722301,136724716	Gene ID= ENSG00000165716.10 TPM= 3.5 Transcript Type= NA
chr9	136712570	136724050	136712570	136724050	+	ENST00000371692.8@FAM69B	ENST00000371692.8	protein_coding	136712570,136717577,136721921,136722125,136722962	136712728,136717711,136722028,136722301,136724050	Gene ID= ENSG00000165716.10 TPM= 45.54 Transcript Type= protein_coding
chr9	136721367	136728185	136721367	136728185	-	transcript5171.chr9.nic@SNHG7	transcript5171.chr9.nic	antisense_RNA	136727881,136727046,136726311,136725055,136721367	136728185,136727086,136726416,136725110,136724000	Gene ID= ENSG00000233016.6 TPM= 5.84 Transcript Type= NA
chr9	136724658	136728184	136724658	136728184	-	ENST00000416970.5@SNHG7	ENST00000416970.5	antisense_RNA	136727881,136727046,136726311,136725055,136724658	136728184,136727086,136726416,136725110,136724939	Gene ID= ENSG00000233016.6 TPM= 7.01 Transcript Type= antisense_RNA
chr9	136724359	136728185	136724359	136728185	-	transcript5178.chr9.nic@SNHG7	transcript5178.chr9.nic	antisense_RNA	136727881,136727046,136726311,136724359	136728185,136727086,136726416,136725110	Gene ID= ENSG00000233016.6 TPM= 17.51 Transcript Type= NA
chr9	136725234	136728184	136725234	136728184	-	ENST00000447221.1@SNHG7	ENST00000447221.1	antisense_RNA	136727881,136725234	136728184,136727086	Gene ID= ENSG00000233016.6 TPM= 2.34 Transcript Type= antisense_RNA
chr9	136738167	136742940	136738167	136742940	-	ENST00000341040.11@LCN10	ENST00000341040.11	protein_coding	136742787,136741881,136739950,136738167	136742940,136742020,136740048,136739553	Gene ID= ENSG00000187922.13 TPM= 4.67 Transcript Type= nonsense_mediated_decay
chr9	136738167	136742023	136738167	136742023	-	transcript5197.chr9.nic@AL355987.1	transcript5197.chr9.nic	protein_coding	136739950,136738167	136742023,136739553	Gene ID= ENSG00000204003.8 TPM= 3.5 Transcript Type= NA
chr9	136744011	136746064	136744011	136746064	-	transcript5176.chr9.nic@LCN6	transcript5176.chr9.nic	protein_coding	136745844,136745170,136744640,136744339,136744011	136746064,136745280,136744741,136744364,136744142	Gene ID= ENSG00000267206.5 TPM= 4.67 Transcript Type= NA
chr9	136791350	136793257	136791350	136793257	+	transcript5205.chr9.nic@TMEM141	transcript5205.chr9.nic	protein_coding	136791350,136791947,136792251,136792819	136791777,136792030,136792358,136793257	Gene ID= ENSG00000244187.7 TPM= 3.01 Transcript Type= NA
chr9	136791355	136793257	136791355	136793257	+	ENST00000290079.8@TMEM141	ENST00000290079.8	protein_coding	136791355,136791711,136791947,136792251,136792819	136791424,136791777,136792030,136792358,136793257	Gene ID= ENSG00000244187.7 TPM= 19.76 Transcript Type= protein_coding
chr9	136791368	136793256	136791368	136793256	+	ENST00000465017.5@TMEM141	ENST00000465017.5	protein_coding	136791368,136791626,136791947,136792251,136792819	136791424,136791777,136792030,136792358,136793256	Gene ID= ENSG00000244187.7 TPM= 5.74 Transcript Type= processed_transcript
chr9	136791372	136793256	136791372	136793256	+	ENST00000483187.5@TMEM141	ENST00000483187.5	protein_coding	136791372,136791947,136792251,136792819	136791424,136792030,136792358,136793256	Gene ID= ENSG00000244187.7 TPM= 3.01 Transcript Type= processed_transcript
chr9	136807848	136841187	136807848	136841187	+	transcript5206.chr9.nnic@RABL6	transcript5206.chr9.nnic	protein_coding	136807848,136823525,136825779,136827782,136828494,136829393,136831721,136832265,136835742,136837346,136837862,136838909,136839222,136839694,136840154,136840322	136808326,136823659,136825826,136827864,136828546,136829484,136831861,136832370,136835845,136837662,136838015,136839121,136839486,136839865,136840212,136841187	Gene ID= ENSG00000196642.18 TPM= 90.49 Transcript Type= NA
chr9	136807926	136840185	136807926	136840185	+	transcript5209.chr9.nic@RABL6	transcript5209.chr9.nic	protein_coding	136807926,136823525,136825779,136828494,136829393,136831721,136832265,136835742,136837346,136837862,136838909,136839222,136839694,136840154	136808326,136823659,136825826,136828546,136829484,136831861,136832370,136835845,136837662,136838015,136839121,136839486,136839865,136840185	Gene ID= ENSG00000196642.18 TPM= 7.59 Transcript Type= NA
chr9	136847962	136851024	136847962	136851024	+	transcript5230.chr9.nnic@PHPT1	transcript5230.chr9.nnic	protein_coding	136847962,136849111,136850013,136850506,136850755	136848283,136849590,136850137,136850560,136851024	Gene ID= ENSG00000054148.17 TPM= 7.59 Transcript Type= NA
chr9	136849094	136851022	136849094	136851022	+	ENST00000247665.11@PHPT1	ENST00000247665.11	protein_coding	136849094,136850013,136850755	136849590,136850137,136851022	Gene ID= ENSG00000054148.17 TPM= 95.16 Transcript Type= protein_coding
chr9	136847940	136851022	136847940	136851022	+	transcript5242.chr9.nic@PHPT1	transcript5242.chr9.nic	protein_coding	136847940,136850013	136849590,136851022	Gene ID= ENSG00000054148.17 TPM= 7.01 Transcript Type= NA
chr9	136849091	136851022	136849091	136851022	+	ENST00000492540.5@PHPT1	ENST00000492540.5	protein_coding	136849091,136850013,136850755	136849590,136850560,136851022	Gene ID= ENSG00000054148.17 TPM= 11.09 Transcript Type= processed_transcript
chr9	136862118	136866345	136862118	136866345	-	transcript5241.chr9.nic@EDF1	transcript5241.chr9.nic	protein_coding	136866181,136863820,136862118	136866345,136863871,136863448	Gene ID= ENSG00000107223.12 TPM= 4.67 Transcript Type= NA
chr9	136862119	136866286	136862119	136866286	-	ENST00000224073.5@EDF1	ENST00000224073.5	protein_coding	136866181,136863820,136863288,136862906,136862119	136866286,136863871,136863448,136862999,136862345	Gene ID= ENSG00000107223.12 TPM= 188.57 Transcript Type= protein_coding
chr9	136862119	136866285	136862119	136866285	-	ENST00000371649.5@EDF1	ENST00000371649.5	protein_coding	136866181,136863820,136863288,136862906,136862119	136866285,136863871,136863448,136862999,136862496	Gene ID= ENSG00000107223.12 TPM= 11.09 Transcript Type= protein_coding
chr9	136919296	136927873	136919296	136927873	+	transcript5250.chr9.nnic@TRAF2	transcript5250.chr9.nnic	protein_coding	136919296,136921038,136923852,136925688	136920515,136921215,136924012,136927873	Gene ID= ENSG00000127191.17 TPM= 4.67 Transcript Type= NA
chr9	136886518	136926607	136886518	136926607	+	ENST00000247668.6@TRAF2	ENST00000247668.6	protein_coding	136886518,136898713,136899594,136900422,136908070,136909920,136916541,136920234,136921038,136923852,136925683	136886541,136898928,136899672,136900520,136908231,136909994,136916615,136920515,136921215,136924000,136926607	Gene ID= ENSG00000127191.17 TPM= 29.19 Transcript Type= protein_coding
chr9	136915102	136918001	136915102	136918001	-	transcript5252.chr9.nnic@NA	transcript5252.chr9.nnic	NA	136915102	136918001	Gene ID= novel_gene_chr9_5253 TPM= 2.34 Transcript Type= NA
chr9	136940435	136944708	136940435	136944708	-	transcript5254.chr9.nnic@FBXW5	transcript5254.chr9.nnic	protein_coding	136944594,136943891,136943349,136942769,136942547,136942046,136941537,136941251,136940601,136940435	136944708,136944106,136943506,136942943,136942695,136942466,136941684,136941463,136941171,136940462	Gene ID= ENSG00000159069.13 TPM= 15.1 Transcript Type= NA
chr9	136940435	136944696	136940435	136944696	-	transcript5271.chr9.nic@FBXW5	transcript5271.chr9.nic	protein_coding	136944594,136943891,136943349,136942769,136942547,136942100,136941537,136941251,136940435	136944696,136944106,136943506,136942943,136942695,136942466,136941684,136941463,136941171	Gene ID= ENSG00000159069.13 TPM= 32.44 Transcript Type= NA
chr9	136940435	136944704	136940435	136944704	-	transcript5280.chr9.nic@FBXW5	transcript5280.chr9.nic	protein_coding	136943891,136943349,136942769,136942547,136942046,136941537,136941251,136940435	136944704,136943506,136942943,136942695,136942466,136941684,136941463,136941171	Gene ID= ENSG00000159069.13 TPM= 20.47 Transcript Type= NA
chr9	136940435	136944691	136940435	136944691	-	transcript5282.chr9.nic@FBXW5	transcript5282.chr9.nic	protein_coding	136944594,136943891,136943349,136942547,136942046,136941537,136941251,136940435	136944691,136944106,136943506,136942943,136942466,136941684,136941463,136941171	Gene ID= ENSG00000159069.13 TPM= 25.72 Transcript Type= NA
chr9	136940435	136944650	136940435	136944650	-	ENST00000325285.7@FBXW5	ENST00000325285.7	protein_coding	136944594,136943891,136943349,136942769,136942547,136942046,136941537,136941251,136940435	136944650,136944106,136943506,136942943,136942695,136942466,136941684,136941463,136941171	Gene ID= ENSG00000159069.13 TPM= 362.57 Transcript Type= protein_coding
chr9	136940435	136944688	136940435	136944688	-	ENST00000483559.5@FBXW5	ENST00000483559.5	protein_coding	136944594,136943891,136943349,136942769,136942046,136941537,136941251,136940435	136944688,136944106,136943506,136942943,136942695,136941684,136941463,136941171	Gene ID= ENSG00000159069.13 TPM= 20.47 Transcript Type= retained_intron
chr9	136977505	136981738	136977505	136981738	+	ENST00000371625.7@PTGDS	ENST00000371625.7	protein_coding	136977505,136978993,136979223,136979946,136980183,136980833,136981579	136977692,136979132,136979299,136980062,136980284,136980855,136981738	Gene ID= ENSG00000107317.12 TPM= 355.77 Transcript Type= protein_coding
chr9	136978812	136981692	136978812	136981692	+	ENST00000492068.2@PTGDS	ENST00000492068.2	protein_coding	136978812,136979223,136979946,136980183,136980833,136981579	136979132,136979299,136980062,136980284,136980855,136981692	Gene ID= ENSG00000107317.12 TPM= 5.49 Transcript Type= retained_intron
chr9	136981904	136985758	136981904	136985758	+	ENST00000482657.1@LCNL1	ENST00000482657.1	protein_coding	136981904,136984713	136984563,136985758	Gene ID= ENSG00000214402.6 TPM= 4.67 Transcript Type= retained_intron
chr9	136992397	136993976	136992397	136993976	+	transcript5347.chr9.nic@PAXX	transcript5347.chr9.nic	protein_coding	136992397,136992640,136992925,136993343,136993580,136993766	136992562,136992700,136993243,136993411,136993664,136993976	Gene ID= ENSG00000148362.10 TPM= 20.01 Transcript Type= NA
chr9	136992397	136993976	136992397	136993976	+	transcript5348.chr9.nnic@PAXX	transcript5348.chr9.nnic	protein_coding	136992397,136992640,136993053,136993343,136993580,136993766	136992562,136992700,136993243,136993411,136993664,136993976	Gene ID= ENSG00000148362.10 TPM= 3.67 Transcript Type= NA
chr9	136992403	136993976	136992403	136993976	+	transcript5353.chr9.nic@PAXX	transcript5353.chr9.nic	protein_coding	136992403,136993053,136993343,136993580,136993766	136992974,136993243,136993411,136993664,136993976	Gene ID= ENSG00000148362.10 TPM= 5.84 Transcript Type= NA
chr9	136992410	136993976	136992410	136993976	+	transcript5356.chr9.nic@PAXX	transcript5356.chr9.nic	protein_coding	136992410,136993343,136993580,136993766	136993243,136993411,136993664,136993976	Gene ID= ENSG00000148362.10 TPM= 12.84 Transcript Type= NA
chr9	136992418	136993976	136992418	136993976	+	ENST00000371620.3@PAXX	ENST00000371620.3	protein_coding	136992418,136992640,136992925,136993053,136993343,136993580,136993766	136992562,136992700,136992974,136993243,136993411,136993664,136993976	Gene ID= ENSG00000148362.10 TPM= 43.36 Transcript Type= protein_coding
chr9	136992463	136993984	136992463	136993984	+	ENST00000498095.4@PAXX	ENST00000498095.4	protein_coding	136992463,136992640,136993343,136993580,136993766	136992562,136993243,136993411,136993664,136993984	Gene ID= ENSG00000148362.10 TPM= 43.36 Transcript Type= retained_intron
chr9	136992491	136993971	136992491	136993971	+	ENST00000493968.5@PAXX	ENST00000493968.5	protein_coding	136992491,136992640,136993053,136993343,136993580,136993766	136992562,136992974,136993243,136993411,136993664,136993971	Gene ID= ENSG00000148362.10 TPM= 4.83 Transcript Type= retained_intron
chr9	136992640	136993975	136992640	136993975	+	ENST00000467845.5@PAXX	ENST00000467845.5	protein_coding	136992640,136992925,136993343,136993580,136993766	136992700,136993243,136993411,136993664,136993975	Gene ID= ENSG00000148362.10 TPM= 2.5 Transcript Type= retained_intron
chr9	136994635	136996803	136994635	136996803	-	ENST00000494426.1@CLIC3	ENST00000494426.1	protein_coding	136996511,136995648,136995442,136995186,136994930,136994635	136996803,136995757,136995567,136995292,136995105,136994839	Gene ID= ENSG00000169583.12 TPM= 220.09 Transcript Type= protein_coding
chr9	136994635	136996566	136994635	136996566	-	transcript5366.chr9.nic@CLIC3	transcript5366.chr9.nic	protein_coding	136996511,136995648,136995442,136995186,136994635	136996566,136995757,136995567,136995292,136995105	Gene ID= ENSG00000169583.12 TPM= 5.84 Transcript Type= NA
chr9	136994635	136995747	136994635	136995747	-	ENST00000480181.1@CLIC3	ENST00000480181.1	protein_coding	136995648,136995442,136994930,136994635	136995747,136995567,136995292,136994839	Gene ID= ENSG00000169583.12 TPM= 1.75 Transcript Type= processed_transcript
chr9	137007232	137008275	137007232	137008275	-	transcript5370.chr9.nnic@NA	transcript5370.chr9.nnic	NA	137007232	137008275	Gene ID= novel_gene_chr9_5371 TPM= 4.67 Transcript Type= NA
chr9	137027464	137037957	137027464	137037957	+	ENST00000623196.1@C9orf139	ENST00000623196.1	antisense_RNA	137027464,137031998,137034650	137027911,137033231,137037957	Gene ID= ENSG00000180539.7 TPM= 7.01 Transcript Type= antisense_RNA
chr9	137030174	137033010	137030174	137033010	-	ENST00000314412.6@FUT7	ENST00000314412.6	protein_coding	137031979,137030174	137033010,137031725	Gene ID= ENSG00000180549.7 TPM= 5.84 Transcript Type= protein_coding
chr9	137039470	137046220	137039470	137046220	-	transcript5385.chr9.nnic@NPDC1	transcript5385.chr9.nnic	protein_coding	137042927,137041062,137040814,137040671,137040514,137040357,137039971,137039470	137046220,137041187,137040984,137040737,137040598,137040436,137040155,137039864	Gene ID= ENSG00000107281.9 TPM= 37.36 Transcript Type= NA
chr9	137039470	137046203	137039470	137046203	-	ENST00000371601.4@NPDC1	ENST00000371601.4	protein_coding	137045878,137042927,137041062,137040814,137040671,137040514,137040357,137039971,137039470	137046203,137043073,137041187,137040984,137040737,137040598,137040436,137040067,137039864	Gene ID= ENSG00000107281.9 TPM= 273.22 Transcript Type= protein_coding
chr9	137077489	137084538	137077489	137084538	+	transcript5452.chr9.nic@UAP1L1	transcript5452.chr9.nic	protein_coding	137077489,137078502,137078976,137079256,137080002,137080689,137081998,137082637	137077821,137078677,137079148,137079449,137080142,137080874,137082064,137084538	Gene ID= ENSG00000197355.10 TPM= 18.1 Transcript Type= NA
chr9	137077501	137084538	137077501	137084538	+	ENST00000409858.7@UAP1L1	ENST00000409858.7	protein_coding	137077501,137078050,137078502,137078976,137079256,137080002,137080689,137081998,137082637	137077821,137078254,137078677,137079148,137079449,137080142,137080874,137082064,137084538	Gene ID= ENSG00000197355.10 TPM= 40.28 Transcript Type= protein_coding
chr9	137084944	137087327	137084944	137087327	-	transcript5465.chr9.nnic@NA	transcript5465.chr9.nnic	NA	137084944	137087327	Gene ID= novel_gene_chr9_5466 TPM= 2.34 Transcript Type= NA
chr9	137086985	137109183	137086985	137109183	+	transcript5401.chr9.nic@MAN1B1	transcript5401.chr9.nic	protein_coding	137086985,137088075,137088869,137096237,137097828,137099696,137101005,137101484,137106125,137106689,137107250,137107531,137108531	137087218,137088183,137089005,137096391,137097937,137099881,137101153,137101672,137106315,137106809,137107447,137107662,137109183	Gene ID= ENSG00000177239.14 TPM= 3.5 Transcript Type= NA
chr9	137086927	137109187	137086927	137109187	+	ENST00000371589.8@MAN1B1	ENST00000371589.8	protein_coding	137086927,137088075,137088869,137096237,137097828,137099696,137101005,137101484,137106125,137106689,137107250,137107531,137108388	137087218,137088183,137089005,137096391,137097937,137099881,137101153,137101672,137106315,137106809,137107447,137107662,137109187	Gene ID= ENSG00000177239.14 TPM= 98.08 Transcript Type= protein_coding
chr9	137110546	137114758	137110546	137114758	-	transcript5414.chr9.nic@DPP7	transcript5414.chr9.nic	protein_coding	137114463,137114243,137113865,137113361,137113206,137112953,137112745,137112112,137111873,137111690,137110880,137110546	137114758,137114382,137114028,137113496,137113287,137113119,137112805,137112230,137112029,137111754,137110950,137110783	Gene ID= ENSG00000176978.13 TPM= 27.27 Transcript Type= NA
chr9	137110546	137114768	137110546	137114768	-	transcript5417.chr9.nnic@DPP7	transcript5417.chr9.nnic	protein_coding	137114647,137114463,137114243,137113865,137113361,137112953,137112745,137112112,137111873,137111690,137110880,137110546	137114768,137114576,137114382,137114028,137113496,137113119,137112805,137112230,137112029,137111754,137110950,137110783	Gene ID= ENSG00000176978.13 TPM= 10.93 Transcript Type= NA
chr9	137110546	137114768	137110546	137114768	-	transcript5419.chr9.nic@DPP7	transcript5419.chr9.nic	protein_coding	137114647,137114463,137114243,137113865,137113361,137113206,137112953,137112112,137111873,137111690,137110880,137110546	137114768,137114576,137114382,137114028,137113496,137113287,137113119,137112805,137112029,137111754,137110950,137110783	Gene ID= ENSG00000176978.13 TPM= 52.96 Transcript Type= NA
chr9	137110546	137114758	137110546	137114758	-	transcript5427.chr9.nic@DPP7	transcript5427.chr9.nic	protein_coding	137114463,137114243,137113865,137113361,137113206,137112953,137112112,137111873,137111690,137110880,137110546	137114758,137114382,137114028,137113496,137113287,137113119,137112805,137112029,137111754,137110950,137110783	Gene ID= ENSG00000176978.13 TPM= 27.27 Transcript Type= NA
chr9	137110542	137114718	137110542	137114718	-	ENST00000371579.6@DPP7	ENST00000371579.6	protein_coding	137114647,137114463,137114243,137113865,137113361,137113206,137112953,137112745,137112112,137111873,137111690,137110880,137110542	137114718,137114576,137114382,137114028,137113496,137113287,137113119,137112805,137112230,137112029,137111754,137110950,137110783	Gene ID= ENSG00000176978.13 TPM= 306.33 Transcript Type= protein_coding
chr9	137128693	137129794	137128693	137129794	-	transcript5467.chr9.nnic@NA	transcript5467.chr9.nnic	NA	137128693	137129794	Gene ID= novel_gene_chr9_5468 TPM= 10.51 Transcript Type= NA
chr9	137174784	137188569	137174784	137188569	-	transcript5470.chr9.nnic@ANAPC2	transcript5470.chr9.nnic	protein_coding	137188416,137186224,137184913,137183672,137183125,137181681,137180788,137180452,137180181,137177049,137175708,137175237,137174784	137188569,137188103,137185087,137183791,137183242,137181862,137180929,137180527,137180384,137177269,137175837,137175472,137175154	Gene ID= ENSG00000176248.8 TPM= 2.34 Transcript Type= NA
chr9	137174784	137188563	137174784	137188563	-	transcript5476.chr9.nic@ANAPC2	transcript5476.chr9.nic	protein_coding	137188416,137187481,137186224,137184913,137183672,137183125,137181681,137180788,137180452,137180181,137175708,137174784	137188563,137188103,137186356,137185087,137183791,137183242,137181862,137180929,137180527,137180384,137175837,137175472	Gene ID= ENSG00000176248.8 TPM= 4.67 Transcript Type= NA
chr9	137174784	137188537	137174784	137188537	-	ENST00000323927.2@ANAPC2	ENST00000323927.2	protein_coding	137188416,137187481,137186224,137184913,137183672,137183125,137181681,137180788,137180452,137180181,137175708,137175237,137174784	137188537,137188103,137186356,137185087,137183791,137183242,137181862,137180929,137180527,137180384,137175837,137175472,137175154	Gene ID= ENSG00000176248.8 TPM= 16.35 Transcript Type= protein_coding
chr9	137188647	137190370	137188647	137190370	+	ENST00000322310.9@SSNA1	ENST00000322310.9	protein_coding	137188647,137189066,137189807	137188778,137189265,137190370	Gene ID= ENSG00000176101.11 TPM= 49.62 Transcript Type= protein_coding
chr9	137188660	137190370	137188660	137190370	+	ENST00000459860.1@SSNA1	ENST00000459860.1	protein_coding	137188660,137189807	137189265,137190370	Gene ID= ENSG00000176101.11 TPM= 50.79 Transcript Type= retained_intron
chr9	137188656	137190364	137188656	137190364	+	transcript5481.chr9.nnic@NA	transcript5481.chr9.nnic	NA	137188656	137190364	Gene ID= novel_gene_chr9_5482 TPM= 9.34 Transcript Type= NA
chr9	137191617	137200798	137191617	137200798	-	ENST00000409012.4@TPRN	ENST00000409012.4	protein_coding	137198987,137192451,137192259,137191617	137200798,137192691,137192365,137192174	Gene ID= ENSG00000176058.11 TPM= 60.13 Transcript Type= protein_coding
chr9	137191619	137195137	137191619	137195137	-	ENST00000477345.1@TPRN	ENST00000477345.1	protein_coding	137192451,137192259,137191619	137195137,137192365,137192174	Gene ID= ENSG00000176058.11 TPM= 8.76 Transcript Type= retained_intron
chr9	137204082	137205638	137204082	137205638	-	ENST00000343666.5@TMEM203	ENST00000343666.5	protein_coding	137204082	137205638	Gene ID= ENSG00000187713.6 TPM= 102.75 Transcript Type= protein_coding
chr9	137220254	137221381	137220254	137221381	-	transcript5495.chr9.nnic@NA	transcript5495.chr9.nnic	NA	137220254	137221381	Gene ID= novel_gene_chr9_5496 TPM= 15.18 Transcript Type= NA
chr9	137241213	137243707	137241213	137243707	+	ENST00000340384.4@TUBB4B	ENST00000340384.4	protein_coding	137241213,137241721,137241911,137242496	137241417,137241829,137242021,137243707	Gene ID= ENSG00000188229.5 TPM= 306.49 Transcript Type= protein_coding
chr9	137241288	137243706	137241288	137243706	+	ENST00000604929.1@TUBB4B	ENST00000604929.1	protein_coding	137241288,137241721,137241911	137241417,137241829,137243706	Gene ID= ENSG00000188229.5 TPM= 101 Transcript Type= retained_intron
chr9	137255173	137273546	137255173	137273546	+	ENST00000343053.4@NELFB	ENST00000343053.4	protein_coding	137255173,137255907,137256329,137256824,137263037,137264245,137265877,137266331,137266944,137267240,137272081,137272507,137272782	137255611,137256070,137256428,137257054,137263222,137264357,137265979,137266426,137267086,137267346,137272222,137272615,137273546	Gene ID= ENSG00000188986.6 TPM= 211.24 Transcript Type= protein_coding
chr9	137255208	137273546	137255208	137273546	+	transcript5519.chr9.nic@NELFB	transcript5519.chr9.nic	protein_coding	137255208,137255907,137256824,137263037,137264245,137265877,137266331,137266944,137267240,137272081,137272507,137272782	137255611,137256428,137257054,137263222,137264357,137265979,137266426,137267086,137267346,137272222,137272615,137273546	Gene ID= ENSG00000188986.6 TPM= 11.68 Transcript Type= NA
chr9	137277749	137282641	137277749	137282641	+	ENST00000357503.2@TOR4A	ENST00000357503.2	protein_coding	137277749,137278653	137277907,137282641	Gene ID= ENSG00000198113.2 TPM= 82.9 Transcript Type= protein_coding
chr9	137300482	137302251	137300482	137302251	-	ENST00000356628.3@NRARP	ENST00000356628.3	protein_coding	137300482	137302251	Gene ID= ENSG00000198435.3 TPM= 21.02 Transcript Type= protein_coding
chr9	137306905	137423262	137306905	137423262	-	ENST00000340951.8@EXD3	ENST00000340951.8	protein_coding	137423114,137395303,137383313,137373426,137372905,137367936,137366493,137356268,137354700,137354339,137352620,137352066,137351318,137351038,137349369,137349110,137348071,137324090,137323725,137309607,137307608,137306905	137423262,137395404,137383377,137373599,137373072,137367989,137366632,137356368,137354773,137354377,137352786,137352201,137351528,137351147,137349531,137349282,137348238,137324143,137323856,137309700,137307646,137307263	Gene ID= ENSG00000187609.15 TPM= 2.14 Transcript Type= protein_coding
chr9	137306905	137423169	137306905	137423169	-	transcript5541.chr9.nnic@EXD3	transcript5541.chr9.nnic	protein_coding	137423114,137395303,137383313,137373426,137372905,137367936,137366493,137356268,137354567,137354339,137352620,137352066,137351318,137351038,137349369,137349110,137348071,137324090,137323725,137309607,137307608,137306905	137423169,137395404,137383377,137373599,137373072,137367989,137366632,137356368,137354773,137354377,137354105,137352201,137351528,137351147,137349531,137349282,137348238,137324143,137323856,137309700,137307646,137307263	Gene ID= ENSG00000187609.15 TPM= 5.25 Transcript Type= NA
chr9	137308635	137423204	137308635	137423204	-	transcript5550.chr9.nnic@EXD3	transcript5550.chr9.nnic	protein_coding	137423114,137395303,137383313,137373426,137372905,137367936,137366493,137356268,137354567,137354339,137352620,137352066,137351318,137351038,137349369,137349110,137348071,137324090,137323725,137310555,137308635	137423204,137395404,137383377,137373599,137373072,137367989,137366632,137356368,137354773,137354377,137352786,137352201,137351528,137351147,137349531,137349282,137348238,137324143,137323856,137310669,137309700	Gene ID= ENSG00000187609.15 TPM= 2.72 Transcript Type= NA
chr9	137306905	137423203	137306905	137423203	-	transcript5551.chr9.nic@EXD3	transcript5551.chr9.nic	protein_coding	137423114,137395303,137383313,137373426,137372905,137367936,137366493,137356268,137354339,137352620,137351318,137351038,137349369,137349110,137348071,137324090,137323725,137309607,137307608,137306905	137423203,137395404,137383377,137373599,137373072,137367989,137366632,137356368,137354377,137352786,137351528,137351147,137349531,137349282,137348238,137324143,137323856,137309700,137307646,137307263	Gene ID= ENSG00000187609.15 TPM= 2.72 Transcript Type= NA
chr9	137366145	137423198	137366145	137423198	-	transcript5572.chr9.nic@EXD3	transcript5572.chr9.nic	protein_coding	137423114,137395303,137383313,137373426,137372905,137367936,137366145	137423198,137395404,137383377,137373599,137373072,137367989,137366632	Gene ID= ENSG00000187609.15 TPM= 2.34 Transcript Type= NA
chr9	137366144	137423263	137366144	137423263	-	transcript5573.chr9.nic@EXD3	transcript5573.chr9.nic	protein_coding	137423114,137395303,137383313,137373426,137372905,137366144	137423263,137395404,137383377,137373599,137373072,137367989	Gene ID= ENSG00000187609.15 TPM= 2.34 Transcript Type= NA
chr9	137366145	137423155	137366145	137423155	-	ENST00000479452.5@EXD3	ENST00000479452.5	protein_coding	137423114,137395303,137383313,137373426,137372905,137367936,137366493,137366145	137423155,137395404,137383377,137373599,137373072,137367989,137366632,137366361	Gene ID= ENSG00000187609.15 TPM= 1.17 Transcript Type= protein_coding
chr9	137391802	137423162	137391802	137423162	-	ENST00000465160.2@EXD3	ENST00000465160.2	protein_coding	137423114,137395303,137391802	137423162,137395404,137393235	Gene ID= ENSG00000187609.15 TPM= 5.84 Transcript Type= protein_coding
chr9	137423415	137434406	137423415	137434406	+	transcript5557.chr9.nnic@NOXA1	transcript5557.chr9.nnic	protein_coding	137423415,137426248,137428033,137428882,137429276,137430784,137431075,137431236,137433029,137433205,137433453,137433750,137433965,137434224	137423706,137426330,137428141,137429016,137429383,137430843,137431100,137431341,137433074,137433263,137433607,137433864,137434079,137434406	Gene ID= ENSG00000188747.8 TPM= 5.84 Transcript Type= NA
chr9	137448225	137459353	137448225	137459353	-	transcript5596.chr9.nnic@NSMF	transcript5596.chr9.nnic	protein_coding	137459032,137458488,137457407,137454746,137454391,137453731,137453056,137452736,137452553,137452365,137450176,137449923,137449599,137448225	137459353,137458549,137457901,137456486,137454443,137453820,137453180,137452819,137452586,137452435,137450255,137450025,137449674,137449491	Gene ID= ENSG00000165802.22 TPM= 6.42 Transcript Type= NA
chr9	137448225	137459353	137448225	137459353	-	transcript5603.chr9.nnic@NSMF	transcript5603.chr9.nnic	protein_coding	137459032,137458488,137457407,137456411,137453731,137452736,137452553,137452365,137450176,137449923,137449599,137448225	137459353,137458549,137457901,137456486,137453820,137452819,137452586,137452435,137450255,137450025,137449674,137449491	Gene ID= ENSG00000165802.22 TPM= 2.34 Transcript Type= NA
chr9	137447573	137459334	137447573	137459334	-	ENST00000371474.7@NSMF	ENST00000371474.7	protein_coding	137459032,137458488,137457407,137456411,137454391,137453731,137453056,137452736,137452553,137452365,137450176,137449923,137449599,137447573	137459334,137458549,137457901,137456486,137454443,137453820,137453180,137452819,137452586,137452435,137450255,137450025,137449674,137449491	Gene ID= ENSG00000165802.22 TPM= 3.5 Transcript Type= protein_coding
chr9	137448232	137459334	137448232	137459334	-	ENST00000265663.12@NSMF	ENST00000265663.12	protein_coding	137459032,137458488,137457407,137456411,137455239,137454391,137453731,137453056,137452736,137452553,137452365,137450176,137449923,137449599,137448232	137459334,137458549,137457901,137456486,137455307,137454443,137453820,137453180,137452819,137452586,137452435,137450255,137450025,137449674,137449491	Gene ID= ENSG00000165802.22 TPM= 47.29 Transcript Type= protein_coding
chr9	137459953	137550534	137459953	137550534	-	ENST00000406427.5@PNPLA7	ENST00000406427.5	protein_coding	137550168,137547585,137547309,137546830,137543724,137543432,137542642,137540642,137522729,137521636,137519917,137515379,137505983,137505614,137501650,137500691,137498114,137497187,137495033,137493013,137484587,137480960,137480312,137479056,137478034,137467317,137464340,137464126,137463415,137462685,137462179,137461931,137461536,137460634,137459953	137550534,137547659,137547396,137546909,137543815,137543572,137542801,137540722,137522857,137521716,137520043,137515519,137506083,137505760,137501727,137500896,137498245,137497310,137495146,137493082,137484736,137481023,137480480,137479238,137478152,137467473,137464456,137464195,137463531,137462833,137462331,137462041,137461620,137460737,137460476	Gene ID= ENSG00000130653.15 TPM= 8.17 Transcript Type= protein_coding
chr9	137459953	137485008	137459953	137485008	-	transcript5594.chr9.nic@PNPLA7	transcript5594.chr9.nic	protein_coding	137484587,137480960,137480312,137479056,137478034,137467317,137464340,137464126,137463415,137462685,137462179,137461931,137461536,137460634,137459953	137485008,137481023,137480480,137479238,137478152,137467473,137464456,137464195,137463531,137462833,137462331,137462041,137461620,137460737,137460476	Gene ID= ENSG00000130653.15 TPM= 10.51 Transcript Type= NA
chr9	137508808	137550384	137508808	137550384	-	ENST00000434090.2@PNPLA7	ENST00000434090.2	protein_coding	137550168,137547585,137547309,137546830,137543724,137543432,137542642,137540642,137522729,137521636,137519917,137515379,137508808	137550384,137547659,137547396,137546909,137543815,137543572,137542801,137540722,137522857,137521716,137520043,137515519,137509814	Gene ID= ENSG00000130653.15 TPM= 1.17 Transcript Type= processed_transcript
chr9	137551199	137552555	137551199	137552555	+	ENST00000371443.5@MRPL41	ENST00000371443.5	protein_coding	137551199,137552074	137551978,137552555	Gene ID= ENSG00000182154.7 TPM= 58.38 Transcript Type= protein_coding
chr9	137554904	137578927	137554904	137578927	-	transcript5612.chr9.nic@DPH7	transcript5612.chr9.nic	protein_coding	137578625,137577470,137576309,137576080,137574752,137574208,137565085,137564893,137564434,137554904	137578927,137577603,137576402,137576167,137574843,137574380,137565154,137564958,137564606,137555648	Gene ID= ENSG00000148399.12 TPM= 11.91 Transcript Type= NA
chr9	137554904	137578927	137554904	137578927	-	transcript5614.chr9.nic@DPH7	transcript5614.chr9.nic	protein_coding	137578625,137577470,137576309,137575709,137574752,137574208,137565085,137564893,137564434,137554904	137578927,137577603,137576402,137576167,137574846,137574380,137565154,137564958,137564606,137555648	Gene ID= ENSG00000148399.12 TPM= 6.07 Transcript Type= NA
chr9	137554904	137578925	137554904	137578925	-	transcript5617.chr9.nic@DPH7	transcript5617.chr9.nic	protein_coding	137578625,137576309,137576080,137574752,137574208,137565085,137564893,137564434,137554904	137578925,137576402,137576167,137574843,137574380,137565154,137564958,137564606,137555648	Gene ID= ENSG00000148399.12 TPM= 3.74 Transcript Type= NA
chr9	137554904	137578927	137554904	137578927	-	transcript5625.chr9.nic@DPH7	transcript5625.chr9.nic	protein_coding	137578625,137577470,137576309,137574752,137574208,137565085,137564893,137564434,137554904	137578927,137577603,137576402,137576167,137574380,137565154,137564958,137564606,137555648	Gene ID= ENSG00000148399.12 TPM= 7.01 Transcript Type= NA
chr9	137554904	137578924	137554904	137578924	-	transcript5627.chr9.nic@DPH7	transcript5627.chr9.nic	protein_coding	137578625,137576080,137574752,137574208,137565085,137564893,137564434,137554904	137578924,137576167,137574843,137574380,137565154,137564958,137564606,137555648	Gene ID= ENSG00000148399.12 TPM= 6.07 Transcript Type= NA
chr9	137554909	137578935	137554909	137578935	-	ENST00000277540.6@DPH7	ENST00000277540.6	protein_coding	137578625,137577470,137576080,137574752,137574208,137565085,137564893,137564434,137554909	137578935,137577603,137576167,137574843,137574380,137565154,137564958,137564606,137555648	Gene ID= ENSG00000148399.12 TPM= 24.75 Transcript Type= protein_coding
chr9	137562059	137563547	137562059	137563547	+	transcript5642.chr9.nnic@NA	transcript5642.chr9.nnic	NA	137562059	137563547	Gene ID= novel_gene_chr9_5643 TPM= 4.67 Transcript Type= NA
chr9	137582079	137590490	137582079	137590490	-	ENST00000298585.2@ZMYND19	ENST00000298585.2	protein_coding	137590213,137588659,137587717,137586967,137582983,137582079	137590490,137588718,137587823,137587107,137583163,137582686	Gene ID= ENSG00000165724.5 TPM= 49.04 Transcript Type= protein_coding
chr9	137605635	137615358	137605635	137615358	+	transcript5675.chr9.nic@ARRDC1	transcript5675.chr9.nic	protein_coding	137605635,137612896,137613413,137613615,137614032,137614299,137614559,137615074	137605835,137613006,137613510,137613769,137614214,137614475,137615000,137615358	Gene ID= ENSG00000197070.13 TPM= 13.23 Transcript Type= NA
chr9	137605635	137615359	137605635	137615359	+	transcript5684.chr9.nic@ARRDC1	transcript5684.chr9.nic	protein_coding	137605635,137612896,137613460,137613615,137614032,137614299,137614559	137605835,137613006,137613510,137613769,137614214,137614475,137615359	Gene ID= ENSG00000197070.13 TPM= 30.74 Transcript Type= NA
chr9	137605635	137615358	137605635	137615358	+	transcript5688.chr9.nic@ARRDC1	transcript5688.chr9.nic	protein_coding	137605635,137612896,137613615,137614032,137614299,137614559,137615074	137605835,137613510,137613769,137614214,137614475,137615000,137615358	Gene ID= ENSG00000197070.13 TPM= 19.65 Transcript Type= NA
chr9	137605635	137615359	137605635	137615359	+	transcript5692.chr9.nic@ARRDC1	transcript5692.chr9.nic	protein_coding	137605635,137612896,137613615,137614032,137614299,137614559	137605835,137613510,137613769,137614214,137614475,137615359	Gene ID= ENSG00000197070.13 TPM= 16.15 Transcript Type= NA
chr9	137605635	137615359	137605635	137615359	+	transcript5696.chr9.nic@ARRDC1	transcript5696.chr9.nic	protein_coding	137605635,137612896,137613615,137614299,137614559	137605835,137613510,137614214,137614475,137615359	Gene ID= ENSG00000197070.13 TPM= 9.92 Transcript Type= NA
chr9	137605654	137615358	137605654	137615358	+	ENST00000371421.8@ARRDC1	ENST00000371421.8	protein_coding	137605654,137612896,137613460,137613615,137614032,137614299,137614559,137615074	137605835,137613006,137613510,137613769,137614214,137614475,137615000,137615358	Gene ID= ENSG00000197070.13 TPM= 112.47 Transcript Type= protein_coding
chr9	137615332	137618813	137615332	137618813	-	ENST00000371417.3@ARRDC1-AS1	ENST00000371417.3	antisense_RNA	137618531,137617934,137615332	137618813,137618191,137616199	Gene ID= ENSG00000203993.4 TPM= 12.84 Transcript Type= antisense_RNA
chr9	137618991	137836127	137618991	137836127	+	transcript5655.chr9.nic@EHMT1	transcript5655.chr9.nic	protein_coding	137618991,137710967,137716626,137728349,137743392,137743902,137752331,137754171,137757880,137762675,137775109,137776618,137777882,137779635,137782291,137790848,137798813,137800880,137811461,137813006,137813386,137814431,137815947,137817439,137818060,137834349,137834773	137619049,137711030,137717182,137728529,137743528,137744090,137752408,137754291,137758011,137762820,137775252,137776844,137778055,137779717,137782397,137790970,137798914,137800984,137811615,137813173,137813530,137814508,137816062,137817525,137818138,137834524,137836127	Gene ID= ENSG00000181090.20 TPM= 23.88 Transcript Type= NA
chr9	137618963	137836127	137618963	137836127	+	ENST00000460843.5@EHMT1	ENST00000460843.5	protein_coding	137618963,137710967,137716626,137728349,137743371,137743902,137752331,137754171,137757880,137762675,137775109,137776618,137777882,137779635,137782291,137790848,137798813,137800880,137811461,137813006,137813386,137814431,137815947,137817439,137818060,137834349,137834773	137619049,137711030,137717182,137728529,137743528,137744090,137752408,137754291,137758011,137762820,137775252,137776844,137778055,137779717,137782397,137790970,137798914,137800984,137811615,137813173,137813530,137814508,137816062,137817525,137818138,137834524,137836127	Gene ID= ENSG00000181090.20 TPM= 75.25 Transcript Type= protein_coding
chr10	135425	254634	135425	254634	+	transcript7.chr10.nic@ZMYND11	transcript7.chr10.nic	protein_coding	135425,179994,209889,221195,236838,237585,239438,240056,240893,242021,246766,247398,248336,248903,252348	135559,180128,210048,221356,236915,237677,239525,240111,240970,242139,246973,247466,248608,249088,254634	Gene ID= ENSG00000015171.19 TPM= 129.25 Transcript Type= NA
chr10	134923	254634	134923	254634	+	transcript13.chr10.nic@ZMYND11	transcript13.chr10.nic	protein_coding	134923,179994,209889,236838,237585,239438,240056,240893,242021,246766,247398,248336,248903,252348	135302,180128,210048,236915,237677,239525,240111,240970,242139,246973,247466,248608,249088,254634	Gene ID= ENSG00000015171.19 TPM= 8.99 Transcript Type= NA
chr10	135069	254637	135069	254637	+	ENST00000381591.5@ZMYND11	ENST00000381591.5	protein_coding	135069,179994,209889,221195,236838,237585,239438,240056,240893,242021,246766,247398,248336,248903,252348	135302,180128,210048,221356,236915,237677,239525,240111,240970,242139,246973,247466,248608,249088,254637	Gene ID= ENSG00000015171.19 TPM= 18.33 Transcript Type= protein_coding
chr10	135484	254626	135484	254626	+	ENST00000381607.8@ZMYND11	ENST00000381607.8	protein_coding	135484,179994,209889,236838,237585,239438,240056,240893,242021,246766,247398,248336,248903,252348	135559,180128,210048,236915,237677,239525,240111,240970,242139,246973,247466,248608,249088,254626	Gene ID= ENSG00000015171.19 TPM= 20.43 Transcript Type= protein_coding
chr10	135509	254634	135509	254634	+	ENST00000402736.5@ZMYND11	ENST00000402736.5	protein_coding	135509,179994,209889,221195,236838,239438,240056,240893,242021,246766,247398,248336,248903,252348	135559,180128,210048,221356,236915,239525,240111,240970,242139,246973,247466,248608,249088,254634	Gene ID= ENSG00000015171.19 TPM= 4.32 Transcript Type= protein_coding
chr10	135061	138763	135061	138763	+	transcript22.chr10.nnic@NA	transcript22.chr10.nnic	NA	135061	138763	Gene ID= novel_gene_chr10_23 TPM= 3.5 Transcript Type= NA
chr10	809542	885762	809542	885762	-	ENST00000316157.7@LARP4B	ENST00000316157.7	protein_coding	885641,884447,864123,863743,844977,842932,836403,830867,829681,829385,825764,825065,820800,817725,814946,814742,809542	885762,884506,864270,863883,845055,843068,836506,830977,829734,829594,825870,825316,820845,817889,815070,814850,813213	Gene ID= ENSG00000107929.14 TPM= 56.04 Transcript Type= protein_coding
chr10	839108	841988	839108	841988	+	transcript44.chr10.nnic@NA	transcript44.chr10.nnic	NA	839108	841988	Gene ID= novel_gene_chr10_45 TPM= 2.34 Transcript Type= NA
chr10	913239	915848	913239	915848	+	transcript46.chr10.nnic@NA	transcript46.chr10.nnic	NA	913239	915848	Gene ID= novel_gene_chr10_47 TPM= 3.5 Transcript Type= NA
chr10	988019	1019936	988019	1019936	+	ENST00000360803.8@GTPBP4	ENST00000360803.8	protein_coding	988019,992489,995929,996106,997208,999003,1000677,1000948,1005818,1007018,1008958,1009529,1010420,1012465,1014247,1015753,1017075	988527,992659,996032,996242,997308,999095,1000868,1001013,1005907,1007128,1009035,1009580,1010520,1012662,1014312,1015896,1019936	Gene ID= ENSG00000107937.18 TPM= 4.67 Transcript Type= protein_coding
chr10	1000542	1003033	1000542	1003033	-	transcript62.chr10.nnic@NA	transcript62.chr10.nnic	NA	1000542	1003033	Gene ID= novel_gene_chr10_63 TPM= 2.34 Transcript Type= NA
chr10	1040023	1056703	1040023	1056703	-	transcript83.chr10.nnic@IDI1	transcript83.chr10.nnic	protein_coding	1056309,1043301,1042632,1040023	1056703,1043393,1042762,1041504	Gene ID= ENSG00000067064.10 TPM= 12.84 Transcript Type= NA
chr10	1049066	1050264	1049066	1050264	+	transcript95.chr10.nnic@NA	transcript95.chr10.nnic	NA	1049066	1050264	Gene ID= novel_gene_chr10_96 TPM= 8.17 Transcript Type= NA
chr10	1056789	1132170	1056789	1132170	+	transcript65.chr10.nnic@WDR37	transcript65.chr10.nnic	protein_coding	1056789,1072116,1077907,1080011,1080412,1084403,1086286,1093452,1096170,1103599,1105126,1124218,1124910,1129213	1056968,1072293,1078003,1080106,1080476,1084538,1086357,1093496,1096246,1103836,1105267,1124352,1125024,1132170	Gene ID= ENSG00000047056.14 TPM= 5.84 Transcript Type= NA
chr10	1056799	1132170	1056799	1132170	+	transcript69.chr10.nnic@WDR37	transcript69.chr10.nnic	protein_coding	1056799,1072116,1077907,1080011,1080412,1084403,1086286,1093452,1096170,1103599,1105126,1124218,1124910,1129213	1056879,1072293,1078003,1080106,1080476,1084538,1086357,1093496,1096246,1103836,1105267,1124352,1125024,1132170	Gene ID= ENSG00000047056.14 TPM= 2.34 Transcript Type= NA
chr10	1056858	1132170	1056858	1132170	+	ENST00000263150.8@WDR37	ENST00000263150.8	protein_coding	1056858,1072116,1077907,1080011,1080412,1084403,1086286,1093452,1096170,1103602,1105126,1124218,1124910,1129213	1056968,1072293,1078003,1080106,1080476,1084538,1086357,1093496,1096246,1103836,1105267,1124352,1125024,1132170	Gene ID= ENSG00000047056.14 TPM= 29.19 Transcript Type= protein_coding
chr10	1050221	1055930	1050221	1055930	-	transcript97.chr10.nnic@NA	transcript97.chr10.nnic	NA	1050221	1055930	Gene ID= novel_gene_chr10_98 TPM= 4.67 Transcript Type= NA
chr10	1050224	1056714	1050224	1056714	-	transcript86.chr10.nnic@NA	transcript86.chr10.nnic	NA	1056309,1054168,1050224	1056714,1054245,1051800	Gene ID= novel_gene_chr10_87 TPM= 2.34 Transcript Type= NA
chr10	1051314	1056714	1051314	1056714	-	transcript88.chr10.nnic@NA	transcript88.chr10.nnic	NA	1056309,1054168,1051314	1056714,1054245,1052471	Gene ID= novel_gene_chr10_89 TPM= 2.34 Transcript Type= NA
chr10	1061788	1064301	1061788	1064301	-	transcript101.chr10.nnic@NA	transcript101.chr10.nnic	NA	1061788	1064301	Gene ID= novel_gene_chr10_102 TPM= 2.34 Transcript Type= NA
chr10	3067548	3137712	3067548	3137712	+	transcript114.chr10.nic@PFKP	transcript114.chr10.nic	protein_coding	3067548,3082388,3099275,3101365,3103779,3105115,3105393,3107214,3108701,3109355,3112222,3113119,3113372,3116776,3118782,3119892,3129819,3132380,3133203,3134483,3135736,3137543	3067707,3082461,3099352,3101554,3103944,3105159,3105501,3107309,3108793,3109480,3112286,3113188,3113518,3116846,3118869,3120044,3129983,3132441,3133314,3134582,3135838,3137712	Gene ID= ENSG00000067057.16 TPM= 2.34 Transcript Type= NA
chr10	3067485	3136802	3067485	3136802	+	transcript118.chr10.nnic@PFKP	transcript118.chr10.nnic	protein_coding	3067485,3082388,3099275,3101365,3103779,3105393,3107214,3108701,3109355,3112222,3113119,3113372,3116776,3118782,3119892,3129819,3132380,3133203,3134483,3135736,3136450	3067707,3082461,3099352,3101554,3103944,3105501,3107309,3108793,3109480,3112286,3113188,3113518,3116846,3118869,3120044,3129983,3132441,3133314,3134582,3135838,3136802	Gene ID= ENSG00000067057.16 TPM= 11.68 Transcript Type= NA
chr10	3067520	3136802	3067520	3136802	+	ENST00000381125.8@PFKP	ENST00000381125.8	protein_coding	3067520,3082388,3099275,3101365,3103779,3105115,3105393,3107214,3108701,3109355,3112222,3113119,3113372,3116776,3118782,3119892,3129819,3132380,3133203,3134483,3135736,3136450	3067707,3082461,3099352,3101554,3103944,3105159,3105501,3107309,3108793,3109480,3112286,3113188,3113518,3116846,3118869,3120044,3129983,3132441,3133314,3134582,3135838,3136802	Gene ID= ENSG00000067057.16 TPM= 61.88 Transcript Type= protein_coding
chr10	3121795	3123386	3121795	3123386	-	transcript120.chr10.nnic@NA	transcript120.chr10.nnic	NA	3121795	3123386	Gene ID= novel_gene_chr10_121 TPM= 8.17 Transcript Type= NA
chr10	3137728	3172785	3137728	3172785	-	transcript103.chr10.nnic@PITRM1	transcript103.chr10.nnic	protein_coding	3172717,3170104,3166936,3166229,3165413,3165238,3163725,3160204,3159848,3158914,3158040,3157435,3156930,3155591,3151247,3149621,3148171,3147987,3147572,3147150,3145596,3144292,3143606,3143389,3140687,3138904,3138235,3137728	3172785,3170206,3167042,3166380,3165527,3165334,3163885,3160330,3159936,3159042,3158153,3157531,3157064,3155729,3151363,3149753,3148291,3148063,3147737,3147250,3145716,3144366,3143731,3143501,3140812,3139049,3138337,3138124	Gene ID= ENSG00000107959.15 TPM= 3.12 Transcript Type= NA
chr10	3137730	3172807	3137730	3172807	-	ENST00000224949.8@PITRM1	ENST00000224949.8	protein_coding	3172717,3170104,3166936,3166229,3165413,3165238,3163725,3160204,3159848,3158914,3158040,3157435,3156930,3155591,3151247,3149621,3148171,3147987,3147572,3147150,3145596,3144292,3143389,3140687,3138904,3138235,3137730	3172807,3170206,3167042,3166380,3165527,3165334,3163885,3160330,3159936,3159042,3158153,3157531,3157064,3155729,3151363,3149753,3148291,3148063,3147737,3147250,3145716,3144366,3143501,3140812,3139049,3138337,3138124	Gene ID= ENSG00000107959.15 TPM= 55.08 Transcript Type= protein_coding
chr10	3137728	3172785	3137728	3172785	-	transcript110.chr10.nic@PITRM1	transcript110.chr10.nic	protein_coding	3172717,3170104,3166936,3166229,3165413,3165238,3163725,3160204,3159848,3158914,3158040,3157435,3156930,3155591,3151247,3149621,3147572,3147150,3145596,3144292,3143389,3140687,3138904,3138235,3137728	3172785,3170206,3167042,3166380,3165527,3165334,3163885,3160330,3159936,3159042,3158153,3157531,3157064,3155729,3151363,3149753,3147737,3147250,3145716,3144366,3143501,3140812,3139049,3138337,3138124	Gene ID= ENSG00000107959.15 TPM= 6.04 Transcript Type= NA
chr10	3773224	3777137	3773224	3777137	+	transcript143.chr10.nnic@NA	transcript143.chr10.nnic	NA	3773224	3777137	Gene ID= novel_gene_chr10_144 TPM= 3.89 Transcript Type= NA
chr10	3775996	3785275	3775996	3785275	-	ENST00000497571.5@KLF6	ENST00000497571.5	protein_coding	3784913,3781641,3780106,3775996	3785275,3782214,3780229,3779590	Gene ID= ENSG00000067082.14 TPM= 99.63 Transcript Type= protein_coding
chr10	3775997	3785281	3775997	3785281	-	ENST00000542957.1@KLF6	ENST00000542957.1	protein_coding	3784913,3781641,3775997	3785281,3782214,3779590	Gene ID= ENSG00000067082.14 TPM= 6.22 Transcript Type= protein_coding
chr10	3779047	3785270	3779047	3785270	-	transcript137.chr10.nic@KLF6	transcript137.chr10.nic	protein_coding	3784913,3780106,3779047	3785270,3782214,3779590	Gene ID= ENSG00000067082.14 TPM= 16.35 Transcript Type= NA
chr10	3779362	3784609	3779362	3784609	+	transcript141.chr10.nnic@NA	transcript141.chr10.nnic	NA	3779362	3784609	Gene ID= novel_gene_chr10_142 TPM= 7.01 Transcript Type= NA
chr10	4987400	5004023	4987400	5004023	-	ENST00000380753.8@AKR1C2	ENST00000380753.8	protein_coding	5003752,5001514,5000550,4999200,4998625,4995756,4995319,4991831,4987400	5004023,5001681,5000666,4999277,4998747,4995865,4995484,4991913,4990038	Gene ID= ENSG00000151632.17 TPM= 1.17 Transcript Type= protein_coding
chr10	5093793	5107686	5093793	5107686	+	ENST00000380554.4@AKR1C3	ENST00000380554.4	protein_coding	5093793,5096410,5097434,5098802,5099327,5102101,5102485,5105595,5107461	5094528,5096577,5097550,5098879,5099449,5102210,5102650,5105677,5107686	Gene ID= ENSG00000196139.13 TPM= 54.88 Transcript Type= protein_coding
chr10	5412551	5458463	5412551	5458463	+	ENST00000355029.8@NET1	ENST00000355029.8	protein_coding	5412551,5426655,5429170,5451830,5452358,5452858,5453250,5453484,5454265,5454948,5456087,5456588	5412820,5426721,5429229,5451937,5452525,5452920,5453346,5453560,5454522,5455118,5456273,5458463	Gene ID= ENSG00000173848.18 TPM= 21.02 Transcript Type= protein_coding
chr10	5446611	5458463	5446611	5458463	+	ENST00000380359.3@NET1	ENST00000380359.3	protein_coding	5446611,5451830,5452358,5452858,5453250,5453484,5454265,5454948,5456087,5456588	5446858,5451937,5452525,5452920,5453346,5453560,5454522,5455118,5456273,5458463	Gene ID= ENSG00000173848.18 TPM= 37.36 Transcript Type= protein_coding
chr10	5638868	5666578	5638868	5666578	-	ENST00000357700.10@ASB13	ENST00000357700.10	protein_coding	5666509,5652863,5651213,5648970,5641770,5638868	5666578,5653050,5651363,5649104,5641961,5640830	Gene ID= ENSG00000196372.12 TPM= 46.12 Transcript Type= protein_coding
chr10	5638868	5666578	5638868	5666578	-	ENST00000459912.5@ASB13	ENST00000459912.5	protein_coding	5666509,5652863,5651213,5648970,5642473,5641770,5638868	5666578,5653050,5651363,5649104,5642553,5641961,5640830	Gene ID= ENSG00000196372.12 TPM= 7.59 Transcript Type= nonsense_mediated_decay
chr10	5765223	5813549	5765223	5813549	-	ENST00000380191.8@GDI2	ENST00000380191.8	protein_coding	5813214,5800598,5796763,5794885,5785852,5785142,5773842,5768213,5766494,5766241,5765223	5813549,5800705,5796862,5795019,5786050,5785273,5773941,5768384,5766638,5766295,5766152	Gene ID= ENSG00000057608.16 TPM= 307.08 Transcript Type= protein_coding
chr10	5878087	5889997	5878087	5889997	-	transcript182.chr10.nnic@ANKRD16	transcript182.chr10.nnic	protein_coding	5889041,5887847,5885723,5883969,5883006,5880298,5878087	5889997,5888241,5885765,5884077,5883167,5880376,5878287	Gene ID= ENSG00000134461.15 TPM= 2.34 Transcript Type= NA
chr10	5878087	5889871	5878087	5889871	-	ENST00000380092.8@ANKRD16	ENST00000380092.8	protein_coding	5889041,5887847,5885723,5883969,5883006,5880298,5878087	5889871,5888067,5885765,5884077,5883167,5880376,5878287	Gene ID= ENSG00000134461.15 TPM= 7.01 Transcript Type= protein_coding
chr10	5890184	5937593	5890184	5937593	+	transcript190.chr10.nic@FBXO18	transcript190.chr10.nic	protein_coding	5890184,5903020,5905218,5906037,5908925,5909159,5910938,5913747,5914178,5915403,5916234,5917420,5917590,5918342,5921258,5921448,5923621,5924311,5925367,5927435,5936456,5937110	5890346,5903175,5905287,5906632,5909055,5909294,5911128,5913839,5914269,5915571,5916456,5917507,5917676,5918478,5921357,5921569,5923696,5924508,5925492,5927541,5936587,5937593	Gene ID= ENSG00000134452.19 TPM= 20.99 Transcript Type= NA
chr10	5890213	5937593	5890213	5937593	+	transcript196.chr10.nnic@FBXO18	transcript196.chr10.nnic	protein_coding	5890213,5895056,5903020,5906037,5908925,5909159,5910938,5913747,5914178,5915403,5916234,5917420,5917590,5918342,5921258,5921448,5923621,5924311,5925367,5927435,5936456,5937110	5890346,5895187,5903175,5906632,5909055,5909294,5911128,5913839,5914269,5915571,5916456,5917507,5917676,5918478,5921357,5921569,5923696,5924508,5925492,5927541,5936587,5937593	Gene ID= ENSG00000134452.19 TPM= 12.42 Transcript Type= NA
chr10	5890243	5937593	5890243	5937593	+	transcript206.chr10.nic@FBXO18	transcript206.chr10.nic	protein_coding	5890243,5903020,5906037,5908925,5909159,5910938,5913747,5914178,5915403,5917420,5917590,5918342,5921258,5921448,5923621,5924311,5925367,5927435,5936456,5937110	5890346,5903175,5906632,5909055,5909294,5911128,5913839,5914269,5916456,5917507,5917676,5918478,5921357,5921569,5923696,5924508,5925492,5927541,5936587,5937593	Gene ID= ENSG00000134452.19 TPM= 5.25 Transcript Type= NA
chr10	5890229	5937593	5890229	5937593	+	transcript207.chr10.nic@FBXO18	transcript207.chr10.nic	protein_coding	5890229,5906037,5908925,5909159,5910938,5913747,5914178,5915403,5916234,5917420,5917590,5918342,5921258,5921448,5923621,5924311,5925367,5927435,5936456,5937110	5890346,5906632,5909055,5909294,5911128,5913839,5914269,5915571,5916456,5917507,5917676,5918478,5921357,5921569,5923696,5924508,5925492,5927541,5936587,5937593	Gene ID= ENSG00000134452.19 TPM= 17.49 Transcript Type= NA
chr10	5890231	5937593	5890231	5937593	+	ENST00000362091.8@FBXO18	ENST00000362091.8	protein_coding	5890231,5903020,5906037,5908925,5909159,5910938,5913747,5914178,5915403,5916234,5917420,5917590,5918342,5921258,5921448,5923621,5924311,5925367,5927435,5936456,5937110	5890346,5903175,5906632,5909055,5909294,5911128,5913839,5914269,5915571,5916456,5917507,5917676,5918478,5921357,5921569,5923696,5924508,5925492,5927541,5936587,5937593	Gene ID= ENSG00000134452.19 TPM= 91.05 Transcript Type= protein_coding
chr10	5890203	5937594	5890203	5937594	+	ENST00000397269.7@FBXO18	ENST00000397269.7	protein_coding	5890203,5903020,5906037,5908925,5909159,5910938,5913747,5914178,5915403,5916234,5917420,5917590,5918342,5921258,5921448,5923621,5924311,5924751,5925367,5927435,5936456,5937110	5890346,5903175,5906632,5909055,5909294,5911128,5913839,5914269,5915571,5916456,5917507,5917676,5918478,5921357,5921569,5923696,5924508,5924801,5925492,5927541,5936587,5937594	Gene ID= ENSG00000134452.19 TPM= 12.24 Transcript Type= protein_coding
chr10	5952386	5978874	5952386	5978874	-	transcript217.chr10.nnic@IL15RA	transcript217.chr10.nnic	protein_coding	5978269,5977777,5966145,5963743,5960367,5959754,5956379,5952386	5978874,5977858,5966339,5963841,5960567,5959786,5956454,5953206	Gene ID= ENSG00000134470.20 TPM= 3.7 Transcript Type= NA
chr10	5952386	5978665	5952386	5978665	-	transcript218.chr10.nnic@IL15RA	transcript218.chr10.nnic	protein_coding	5978269,5977777,5966145,5963743,5960367,5959754,5956379,5952386	5978665,5978195,5966339,5963841,5960567,5959786,5956454,5953206	Gene ID= ENSG00000134470.20 TPM= 4.87 Transcript Type= NA
chr10	5952386	5977557	5952386	5977557	-	transcript226.chr10.nic@IL15RA	transcript226.chr10.nic	protein_coding	5977405,5968776,5966145,5960367,5959754,5956379,5952386	5977557,5968928,5966339,5960567,5959786,5956454,5953206	Gene ID= ENSG00000134470.20 TPM= 2.53 Transcript Type= NA
chr10	5952386	5978874	5952386	5978874	-	transcript227.chr10.nnic@IL15RA	transcript227.chr10.nnic	protein_coding	5978269,5977777,5966145,5960367,5959754,5956379,5952386	5978874,5977858,5966339,5960567,5959786,5956454,5953206	Gene ID= ENSG00000134470.20 TPM= 2.53 Transcript Type= NA
chr10	5952386	5978091	5952386	5978091	-	transcript233.chr10.nnic@IL15RA	transcript233.chr10.nnic	protein_coding	5977777,5963743,5960367,5959754,5956379,5952386	5978091,5963841,5960567,5959786,5956454,5953206	Gene ID= ENSG00000134470.20 TPM= 2.53 Transcript Type= NA
chr10	5952371	5977590	5952371	5977590	-	ENST00000379977.7@IL15RA	ENST00000379977.7	protein_coding	5977405,5966145,5963743,5960367,5959754,5956379,5952371	5977590,5966339,5963841,5960567,5959786,5956454,5953206	Gene ID= ENSG00000134470.20 TPM= 29.39 Transcript Type= protein_coding
chr10	5952393	5978038	5952393	5978038	-	ENST00000532948.5@IL15RA	ENST00000532948.5	protein_coding	5977777,5966145,5960367,5959754,5956379,5952393	5978038,5966339,5960567,5959786,5956454,5953206	Gene ID= ENSG00000134470.20 TPM= 3.5 Transcript Type= processed_transcript
chr10	5949449	5951171	5949449	5951171	+	transcript242.chr10.nnic@NA	transcript242.chr10.nnic	NA	5949449	5951171	Gene ID= novel_gene_chr10_243 TPM= 18.68 Transcript Type= NA
chr10	5976937	5979740	5976937	5979740	+	transcript240.chr10.nnic@NA	transcript240.chr10.nnic	NA	5976937	5979740	Gene ID= novel_gene_chr10_241 TPM= 14.01 Transcript Type= NA
chr10	6010689	6062325	6010689	6062325	-	ENST00000379959.7@IL2RA	ENST00000379959.7	protein_coding	6062088,6025834,6024244,6021478,6019870,6019428,6018053,6010689	6062325,6026025,6024354,6021693,6019941,6019499,6018119,6012896	Gene ID= ENSG00000134460.15 TPM= 3.5 Transcript Type= protein_coding
chr10	6088980	6115766	6088980	6115766	+	transcript255.chr10.nic@RBM17	transcript255.chr10.nic	protein_coding	6088980,6097048,6101271,6104931,6106141,6108686,6109986,6112210,6113508,6114049,6115239,6115453	6089193,6097188,6101387,6105097,6106238,6108742,6110127,6113068,6113581,6114147,6115311,6115766	Gene ID= ENSG00000134453.15 TPM= 10.51 Transcript Type= NA
chr10	6088987	6116880	6088987	6116880	+	ENST00000379888.8@RBM17	ENST00000379888.8	protein_coding	6088987,6097048,6101271,6104931,6106141,6108686,6109986,6112210,6113508,6114049,6115239,6115453	6089193,6097188,6101387,6105097,6106238,6108742,6110127,6112361,6113581,6114147,6115311,6116880	Gene ID= ENSG00000134453.15 TPM= 67.72 Transcript Type= protein_coding
chr10	6202930	6235532	6202930	6235532	+	transcript266.chr10.nic@PFKFB3	transcript266.chr10.nic	protein_coding	6202930,6213623,6215221,6216125,6216706,6217135,6219569,6220658,6221381,6221641,6222855,6223958,6224149,6224506,6226192,6232895	6203336,6213748,6215317,6216191,6216780,6217191,6219693,6220865,6221527,6221745,6222984,6224020,6224213,6224623,6226365,6235532	Gene ID= ENSG00000170525.19 TPM= 8.14 Transcript Type= NA
chr10	6202931	6235532	6202931	6235532	+	ENST00000379775.8@PFKFB3	ENST00000379775.8	protein_coding	6202931,6213623,6215221,6216125,6216706,6217135,6219569,6220658,6221381,6221641,6222855,6223958,6224149,6226192,6232895	6203336,6213748,6215317,6216191,6216780,6217191,6219693,6220865,6221527,6221745,6222984,6224020,6224213,6226365,6235532	Gene ID= ENSG00000170525.19 TPM= 98.04 Transcript Type= protein_coding
chr10	6202930	6235532	6202930	6235532	+	transcript277.chr10.nic@PFKFB3	transcript277.chr10.nic	protein_coding	6202930,6213623,6215221,6216125,6216706,6217135,6219569,6220658,6221381,6221641,6222855,6223958,6224149,6232895	6203336,6213748,6215317,6216191,6216780,6217191,6219693,6220865,6221527,6221745,6222984,6224020,6224213,6235532	Gene ID= ENSG00000170525.19 TPM= 12.61 Transcript Type= NA
chr10	6144934	6235532	6144934	6235532	+	ENST00000379789.8@PFKFB3	ENST00000379789.8	protein_coding	6144934,6213623,6215221,6216125,6216706,6217135,6219569,6220658,6221381,6221641,6222855,6223958,6224149,6226192,6232895	6145013,6213748,6215317,6216191,6216780,6217191,6219693,6220865,6221527,6221745,6222984,6224020,6224213,6226365,6235532	Gene ID= ENSG00000170525.19 TPM= 23.32 Transcript Type= protein_coding
chr10	6231209	6233999	6231209	6233999	-	transcript284.chr10.nnic@NA	transcript284.chr10.nnic	NA	6231209	6233999	Gene ID= novel_gene_chr10_285 TPM= 3.5 Transcript Type= NA
chr10	6350316	6352762	6350316	6352762	+	ENST00000391437.2@AL137145.1	ENST00000391437.2	lincRNA	6350316	6352762	Gene ID= ENSG00000212743.2 TPM= 1.17 Transcript Type= lincRNA
chr10	6427143	6580301	6427143	6580301	-	ENST00000263125.9@PRKCQ	ENST00000263125.9	protein_coding	6580211,6515018,6510995,6507436,6498396,6497220,6497035,6491683,6486035,6485152,6483440,6478992,6464313,6462303,6456674,6441893,6430810,6427143	6580301,6515144,6511194,6507496,6498558,6497251,6497120,6491812,6486144,6485269,6483600,6479165,6464404,6462365,6456812,6442081,6430938,6428362	Gene ID= ENSG00000065675.14 TPM= 8.17 Transcript Type= protein_coding
chr10	7559270	7666971	7559270	7666971	-	ENST00000397146.6@ITIH5	ENST00000397146.6	protein_coding	7666803,7655631,7641927,7640754,7637228,7617113,7615982,7585901,7579755,7576453,7573142,7569668,7566030,7559270	7666971,7655675,7642090,7640855,7637478,7617282,7616098,7586069,7580064,7577012,7573195,7569784,7566407,7563384	Gene ID= ENSG00000123243.14 TPM= 3.5 Transcript Type= protein_coding
chr10	7703269	7749520	7703269	7749520	+	ENST00000358415.8@ITIH2	ENST00000358415.8	protein_coding	7703269,7705108,7707201,7709022,7713181,7717626,7720856,7721649,7723451,7726950,7727703,7729952,7731811,7732338,7734922,7738621,7743146,7744082,7744791,7746593,7749187	7703518,7705182,7707233,7709191,7713285,7717788,7720963,7721777,7723567,7727118,7727828,7730133,7731996,7732477,7735091,7738758,7743259,7744280,7744963,7746704,7749520	Gene ID= ENSG00000151655.18 TPM= 2.34 Transcript Type= protein_coding
chr10	7788103	7805769	7788103	7805769	+	transcript322.chr10.nic@ATP5C1	transcript322.chr10.nic	protein_coding	7788103,7796121,7797047,7798990,7799772,7800027,7802270,7802758	7788263,7796155,7797178,7799194,7799915,7800091,7802425,7805769	Gene ID= ENSG00000165629.19 TPM= 4.67 Transcript Type= NA
chr10	7788129	7807815	7788129	7807815	+	ENST00000356708.11@ATP5C1	ENST00000356708.11	protein_coding	7788129,7796121,7797047,7798990,7799772,7800027,7802270,7802758,7806974,7807659	7788263,7796155,7797178,7799194,7799915,7800091,7802425,7802854,7807010,7807815	Gene ID= ENSG00000165629.19 TPM= 135.44 Transcript Type= protein_coding
chr10	7788177	7807815	7788177	7807815	+	ENST00000335698.4@ATP5C1	ENST00000335698.4	protein_coding	7788177,7796121,7797047,7798990,7799772,7800027,7802270,7802758,7807659	7788263,7796155,7797178,7799194,7799915,7800091,7802425,7802854,7807815	Gene ID= ENSG00000165629.19 TPM= 31.53 Transcript Type= protein_coding
chr10	7818494	7965627	7818494	7965627	+	transcript331.chr10.nic@TAF3	transcript331.chr10.nic	protein_coding	7818494,7824318,7963920	7818875,7824560,7965627	Gene ID= ENSG00000165632.7 TPM= 10.51 Transcript Type= NA
chr10	8054693	8075198	8054693	8075198	+	ENST00000379328.7@GATA3	ENST00000379328.7	protein_coding	8054693,8055287,8058305,8063993,8069473,8073739	8054891,8055896,8058841,8064138,8069598,8075198	Gene ID= ENSG00000107485.15 TPM= 2.34 Transcript Type= protein_coding
chr10	10775757	10794972	10775757	10794972	-	transcript340.chr10.nnic@SFTA1P	transcript340.chr10.nnic	lincRNA	10794698,10792372,10786645,10781079,10780331,10775757	10794972,10792525,10786755,10781124,10780428,10777999	Gene ID= ENSG00000225383.7 TPM= 2.34 Transcript Type= NA
chr10	10784437	10794972	10784437	10794972	-	transcript352.chr10.nic@SFTA1P	transcript352.chr10.nic	lincRNA	10794698,10792372,10786645,10784437	10794972,10792525,10786755,10784669	Gene ID= ENSG00000225383.7 TPM= 18.68 Transcript Type= NA
chr10	10784437	10794926	10784437	10794926	-	transcript355.chr10.nic@SFTA1P	transcript355.chr10.nic	lincRNA	10792372,10786645,10784437	10794926,10786735,10784669	Gene ID= ENSG00000225383.7 TPM= 4.67 Transcript Type= NA
chr10	10784438	10794980	10784438	10794980	-	ENST00000434919.6@SFTA1P	ENST00000434919.6	lincRNA	10794839,10786645,10784438	10794980,10786735,10784669	Gene ID= ENSG00000225383.7 TPM= 2.72 Transcript Type= lincRNA
chr10	10784439	10794914	10784439	10794914	-	ENST00000446372.2@SFTA1P	ENST00000446372.2	lincRNA	10794698,10792372,10786645,10784439	10794914,10792525,10786735,10784669	Gene ID= ENSG00000225383.7 TPM= 42.03 Transcript Type= lincRNA
chr10	10784437	10794967	10784437	10794967	-	ENST00000415590.6@SFTA1P	ENST00000415590.6	lincRNA	10794839,10792372,10786645,10784437	10794967,10792525,10786755,10784669	Gene ID= ENSG00000225383.7 TPM= 9.73 Transcript Type= lincRNA
chr10	10784437	10794957	10784437	10794957	-	ENST00000602763.5@SFTA1P	ENST00000602763.5	lincRNA	10794839,10792372,10786645,10784437	10794957,10792525,10786735,10784669	Gene ID= ENSG00000225383.7 TPM= 7.39 Transcript Type= lincRNA
chr10	10784435	10788585	10784435	10788585	-	transcript360.chr10.nnic@NA	transcript360.chr10.nnic	NA	10784435	10788585	Gene ID= novel_gene_chr10_361 TPM= 4.67 Transcript Type= NA
chr10	11005324	11334358	11005324	11334358	+	ENST00000631460.1@CELF2	ENST00000631460.1	protein_coding	11005324,11165486,11217425,11249153,11257738,11266598,11270666,11275057,11288418,11314139,11321207,11325836,11328926,11330456	11005440,11165682,11217507,11249201,11257872,11266677,11270824,11275120,11288552,11314258,11321386,11325979,11329097,11334358	Gene ID= ENSG00000048740.18 TPM= 4.29 Transcript Type= protein_coding
chr10	11165030	11336675	11165030	11336675	+	ENST00000417956.6@CELF2	ENST00000417956.6	protein_coding	11165030,11165486,11217425,11249153,11257738,11266598,11270666,11275057,11288418,11314139,11321189,11325836,11328926,11330456	11165317,11165682,11217507,11249201,11257872,11266677,11270824,11275120,11288552,11314258,11321386,11325979,11329097,11336675	Gene ID= ENSG00000048740.18 TPM= 11.29 Transcript Type= protein_coding
chr10	11017872	11331299	11017872	11331299	+	transcript375.chr10.nic@CELF2	transcript375.chr10.nic	protein_coding	11017872,11165486,11217425,11249153,11257738,11266598,11270666,11275057,11288418,11314139,11321207,11325836,11328926	11018163,11165682,11217507,11249201,11257872,11266677,11270824,11275120,11288552,11314258,11321386,11325979,11331299	Gene ID= ENSG00000048740.18 TPM= 13.28 Transcript Type= NA
chr10	11010042	11011476	11010042	11011476	+	transcript387.chr10.nnic@NA	transcript387.chr10.nnic	NA	11010042	11011476	Gene ID= novel_gene_chr10_388 TPM= 3.5 Transcript Type= NA
chr10	11172491	11177433	11172491	11177433	+	transcript389.chr10.nnic@NA	transcript389.chr10.nnic	NA	11172491	11177433	Gene ID= novel_gene_chr10_390 TPM= 2.34 Transcript Type= NA
chr10	11251272	11254039	11251272	11254039	-	transcript397.chr10.nnic@NA	transcript397.chr10.nnic	NA	11251272	11254039	Gene ID= novel_gene_chr10_398 TPM= 26.85 Transcript Type= NA
chr10	11260651	11262482	11260651	11262482	-	transcript395.chr10.nnic@NA	transcript395.chr10.nnic	NA	11260651	11262482	Gene ID= novel_gene_chr10_396 TPM= 7.01 Transcript Type= NA
chr10	11564127	11611666	11564127	11611666	-	ENST00000606752.1@USP6NL	ENST00000606752.1	protein_coding	11611443,11597631,11564127	11611666,11597717,11565638	Gene ID= ENSG00000148429.14 TPM= 3.5 Transcript Type= processed_transcript
chr10	11471802	11475618	11471802	11475618	+	transcript407.chr10.nnic@NA	transcript407.chr10.nnic	NA	11471802	11475618	Gene ID= novel_gene_chr10_408 TPM= 2.34 Transcript Type= NA
chr10	11742366	11764070	11742366	11764070	+	ENST00000379215.8@ECHDC3	ENST00000379215.8	protein_coding	11742366,11747349,11749495,11755408,11763224	11742746,11747470,11749592,11755608,11764070	Gene ID= ENSG00000134463.14 TPM= 119.09 Transcript Type= protein_coding
chr10	11742375	11757902	11742375	11757902	+	transcript413.chr10.nic@ECHDC3	transcript413.chr10.nic	protein_coding	11742375,11747349,11749495,11755408	11742746,11747470,11749592,11757902	Gene ID= ENSG00000134463.14 TPM= 3.5 Transcript Type= NA
chr10	11758998	11762081	11758998	11762081	+	transcript417.chr10.nnic@NA	transcript417.chr10.nnic	NA	11758998	11762081	Gene ID= novel_gene_chr10_418 TPM= 2.34 Transcript Type= NA
chr10	11823317	11870873	11823317	11870873	+	transcript421.chr10.nic@PROSER2	transcript421.chr10.nic	protein_coding	11823317,11851997,11862912,11866531,11869490	11823470,11852215,11863042,11866783,11870873	Gene ID= ENSG00000148426.12 TPM= 7.01 Transcript Type= NA
chr10	11869644	11870875	11869644	11870875	+	ENST00000379200.1@PROSER2	ENST00000379200.1	protein_coding	11869644	11870875	Gene ID= ENSG00000148426.12 TPM= 14.01 Transcript Type= protein_coding
chr10	11823398	11872277	11823398	11872277	+	ENST00000277570.9@PROSER2	ENST00000277570.9	protein_coding	11823398,11851997,11866531,11869490	11823470,11852215,11866783,11872277	Gene ID= ENSG00000148426.12 TPM= 14.01 Transcript Type= protein_coding
chr10	11920022	12042897	11920022	12042897	-	transcript431.chr10.nnic@UPF2	transcript431.chr10.nnic	protein_coding	12042755,12035059,12028745,12014024,12004530,11999906,11997672,11979057,11967341,11964009,11959171,11956320,11955232,11952066,11948369,11943064,11942665,11936545,11931641,11929865,11920022	12042897,12035441,12029524,12014184,12004727,12000009,11997757,11979165,11967454,11964125,11959356,11956523,11955507,11952249,11948508,11943168,11942763,11936712,11931782,11929985,11921307	Gene ID= ENSG00000151461.19 TPM= 5.25 Transcript Type= NA
chr10	12026647	12042832	12026647	12042832	-	transcript433.chr10.nic@UPF2	transcript433.chr10.nic	protein_coding	12042755,12035059,12026647	12042832,12035441,12029524	Gene ID= ENSG00000151461.19 TPM= 2.34 Transcript Type= NA
chr10	11920022	12042834	11920022	12042834	-	ENST00000357604.9@UPF2	ENST00000357604.9	protein_coding	12042755,12035059,12028745,12014024,12004530,12001676,11999906,11997672,11979057,11967341,11964009,11959171,11956320,11955232,11952066,11948369,11943064,11942665,11936545,11931641,11929865,11920022	12042834,12035441,12029524,12014184,12004727,12001825,12000009,11997757,11979165,11967454,11964125,11959356,11956523,11955507,11952249,11948508,11943168,11942763,11936712,11931782,11929985,11921307	Gene ID= ENSG00000151461.19 TPM= 20.43 Transcript Type= protein_coding
chr10	12068926	12121238	12068926	12121238	+	transcript441.chr10.nnic@DHTKD1	transcript441.chr10.nnic	protein_coding	12068926,12081472,12084540,12087535,12088986,12091513,12094073,12097684,12100178,12101042,12106246,12107909,12117673,12118749,12120182,12120787	12069187,12081627,12084751,12087729,12089255,12091684,12094271,12097996,12100262,12101181,12106396,12108015,12117755,12118918,12120267,12121238	Gene ID= ENSG00000181192.11 TPM= 3.5 Transcript Type= NA
chr10	12068972	12123225	12068972	12123225	+	ENST00000263035.8@DHTKD1	ENST00000263035.8	protein_coding	12068972,12081472,12084540,12087535,12088986,12091513,12094073,12097684,12100178,12101042,12106246,12107909,12112900,12117673,12118749,12120182,12120787	12069187,12081627,12084751,12087729,12089255,12091684,12094271,12097996,12100262,12101181,12106396,12108015,12113064,12117755,12118918,12120267,12123225	Gene ID= ENSG00000181192.11 TPM= 8.17 Transcript Type= protein_coding
chr10	12167577	12196144	12167577	12196144	-	ENST00000537776.5@NUDT5	ENST00000537776.5	protein_coding	12195770,12186229,12184889,12179083,12177793,12173718,12172769,12170900,12170717,12167577	12196144,12186332,12184956,12179132,12177900,12173813,12172866,12170912,12170770,12167811	Gene ID= ENSG00000165609.12 TPM= 29.19 Transcript Type= protein_coding
chr10	12167576	12195890	12167576	12195890	-	transcript468.chr10.nnic@NUDT5	transcript468.chr10.nnic	protein_coding	12195770,12186229,12184889,12179083,12177793,12172769,12170900,12170717,12167576	12195890,12186332,12184956,12179132,12177900,12172866,12170912,12170770,12167811	Gene ID= ENSG00000165609.12 TPM= 2.34 Transcript Type= NA
chr10	12167576	12195850	12167576	12195850	-	transcript472.chr10.nic@NUDT5	transcript472.chr10.nic	protein_coding	12195770,12186229,12184889,12179083,12177793,12173718,12170717,12167576	12195850,12186332,12184956,12179132,12177900,12173813,12172866,12167811	Gene ID= ENSG00000165609.12 TPM= 2.34 Transcript Type= NA
chr10	12195966	12250588	12195966	12250588	+	ENST00000281141.8@CDC123	ENST00000281141.8	protein_coding	12195966,12198705,12209967,12210290,12215740,12217361,12230948,12235048,12237144,12238457,12246149,12249581,12250311	12196319,12198776,12210024,12210322,12215835,12217467,12230996,12235123,12237266,12238485,12246277,12249718,12250588	Gene ID= ENSG00000151465.13 TPM= 66.35 Transcript Type= protein_coding
chr10	12196196	12250588	12196196	12250588	+	transcript454.chr10.nic@CDC123	transcript454.chr10.nic	protein_coding	12196196,12198705,12209967,12210290,12215740,12217361,12230948,12235048,12237144,12238457,12249581,12250311	12196319,12198776,12210024,12210322,12215835,12217467,12230996,12235123,12237266,12238485,12249718,12250588	Gene ID= ENSG00000151465.13 TPM= 2.92 Transcript Type= NA
chr10	12196178	12250588	12196178	12250588	+	transcript456.chr10.nic@CDC123	transcript456.chr10.nic	protein_coding	12196178,12198705,12209967,12210290,12215740,12230948,12235048,12237144,12238457,12246149,12249581,12250311	12196319,12198776,12210024,12210322,12217467,12230996,12235123,12237266,12238485,12246277,12249718,12250588	Gene ID= ENSG00000151465.13 TPM= 3.3 Transcript Type= NA
chr10	12196197	12250588	12196197	12250588	+	transcript457.chr10.nic@CDC123	transcript457.chr10.nic	protein_coding	12196197,12198705,12209967,12210290,12217361,12230948,12235048,12237144,12238457,12246149,12249581,12250311	12196319,12198776,12210024,12210322,12217467,12230996,12235123,12237266,12238485,12246277,12249718,12250588	Gene ID= ENSG00000151465.13 TPM= 3.3 Transcript Type= NA
chr10	12349482	12835545	12349482	12835545	+	ENST00000619168.4@CAMK1D	ENST00000619168.4	protein_coding	12349482,12553225,12666736,12760948,12769673,12791158,12814195,12816250,12824465,12825573,12828769	12349910,12553356,12666810,12761086,12769799,12791233,12814307,12816328,12824552,12825690,12835545	Gene ID= ENSG00000183049.12 TPM= 11.68 Transcript Type= protein_coding
chr10	12553225	12826464	12553225	12826464	+	transcript487.chr10.nic@CAMK1D	transcript487.chr10.nic	protein_coding	12553225,12666736,12760948,12769673,12791158,12814195,12816250,12824465,12825573	12553356,12666810,12761086,12769799,12791233,12814307,12816328,12824552,12826464	Gene ID= ENSG00000183049.12 TPM= 4.67 Transcript Type= NA
chr10	12896625	13001697	12896625	13001697	-	ENST00000378825.4@CCDC3	ENST00000378825.4	protein_coding	13001197,12998338,12896625	13001697,12998512,12898679	Gene ID= ENSG00000151468.10 TPM= 19.85 Transcript Type= protein_coding
chr10	13100061	13138308	13100061	13138308	+	transcript521.chr10.nic@OPTN	transcript521.chr10.nic	protein_coding	13100061,13109112,13110274,13112453,13116267,13118906,13122385,13123995,13125418,13125946,13127745,13132067,13133502,13136745	13100302,13109288,13110476,13112635,13116340,13119040,13122487,13124110,13125567,13126039,13127903,13132197,13133581,13138308	Gene ID= ENSG00000123240.16 TPM= 8.56 Transcript Type= NA
chr10	13100169	13138308	13100169	13138308	+	ENST00000378757.6@OPTN	ENST00000378757.6	protein_coding	13100169,13109112,13110274,13112453,13116267,13118888,13122385,13123995,13125418,13125946,13127745,13132067,13133502,13136745	13100302,13109288,13110476,13112635,13116340,13119040,13122487,13124110,13125567,13126039,13127903,13132197,13133581,13138308	Gene ID= ENSG00000123240.16 TPM= 38.92 Transcript Type= protein_coding
chr10	13100225	13138291	13100225	13138291	+	ENST00000378747.7@OPTN	ENST00000378747.7	protein_coding	13100225,13108138,13109112,13110274,13112453,13116267,13118888,13122385,13123995,13125418,13125946,13127745,13132067,13133502,13136745	13100302,13108289,13109288,13110476,13112635,13116340,13119040,13122487,13124110,13125567,13126039,13127903,13132197,13133581,13138291	Gene ID= ENSG00000123240.16 TPM= 5.06 Transcript Type= protein_coding
chr10	13277800	13300064	13277800	13300064	-	transcript539.chr10.nnic@PHYH	transcript539.chr10.nnic	protein_coding	13299968,13298187,13295496,13294428,13283690,13280976,13277800	13300064,13298245,13295606,13294596,13283839,13281110,13278354	Gene ID= ENSG00000107537.13 TPM= 2.92 Transcript Type= NA
chr10	13277800	13300101	13277800	13300101	-	ENST00000263038.8@PHYH	ENST00000263038.8	protein_coding	13299968,13298187,13295496,13294428,13291831,13288360,13283690,13280976,13277800	13300101,13298245,13295606,13294596,13291912,13288541,13283839,13281110,13278354	Gene ID= ENSG00000107537.13 TPM= 40.28 Transcript Type= protein_coding
chr10	13317424	13347722	13317424	13347722	-	transcript546.chr10.nic@SEPHS1	transcript546.chr10.nic	protein_coding	13347277,13344758,13338705,13336243,13333817,13329698,13328351,13322835,13317424	13347722,13345028,13338808,13336350,13333971,13329788,13328450,13323047,13319356	Gene ID= ENSG00000086475.14 TPM= 13.72 Transcript Type= NA
chr10	13319057	13347613	13319057	13347613	-	transcript555.chr10.nic@SEPHS1	transcript555.chr10.nic	protein_coding	13344758,13338705,13336243,13333817,13329698,13328351,13322835,13319057	13347613,13338808,13336350,13333971,13329788,13328450,13323047,13319356	Gene ID= ENSG00000086475.14 TPM= 2.34 Transcript Type= NA
chr10	13317424	13348297	13317424	13348297	-	ENST00000327347.9@SEPHS1	ENST00000327347.9	protein_coding	13348000,13344758,13338705,13336243,13333817,13329698,13328351,13322835,13317424	13348297,13345028,13338808,13336350,13333971,13329788,13328450,13323047,13319356	Gene ID= ENSG00000086475.14 TPM= 21.6 Transcript Type= protein_coding
chr10	13441088	13528996	13441088	13528996	-	transcript560.chr10.nic@BEND7	transcript560.chr10.nic	protein_coding	13528473,13526138,13499778,13496766,13492611,13480899,13452539,13447266,13441088	13528996,13526221,13500080,13496888,13492876,13481124,13452658,13447319,13443403	Gene ID= ENSG00000165626.16 TPM= 2.34 Transcript Type= NA
chr10	13441092	13529061	13441092	13529061	-	transcript562.chr10.nic@BEND7	transcript562.chr10.nic	protein_coding	13528473,13526138,13499739,13496766,13492611,13480899,13452539,13447266,13441092	13529061,13526221,13500080,13496888,13492876,13481124,13452658,13447316,13441750	Gene ID= ENSG00000165626.16 TPM= 2.92 Transcript Type= NA
chr10	13441092	13529286	13441092	13529286	-	transcript564.chr10.nic@BEND7	transcript564.chr10.nic	protein_coding	13528473,13526138,13499778,13496766,13492611,13480899,13452539,13447266,13441092	13529286,13526221,13500080,13496888,13492876,13481124,13452658,13447319,13441750	Gene ID= ENSG00000165626.16 TPM= 2.92 Transcript Type= NA
chr10	13480888	13528973	13480888	13528973	-	transcript571.chr10.nic@BEND7	transcript571.chr10.nic	protein_coding	13528473,13526138,13499739,13496766,13492611,13480888	13528973,13526221,13500080,13496888,13492876,13481124	Gene ID= ENSG00000165626.16 TPM= 2.34 Transcript Type= NA
chr10	13586927	13630868	13586927	13630868	+	ENST00000378572.7@PRPF18	ENST00000378572.7	protein_coding	13586927,13597458,13600244,13605631,13610039,13611615,13613741,13614015,13616398,13630260	13587152,13597535,13600348,13605744,13610185,13611683,13613881,13614086,13616553,13630868	Gene ID= ENSG00000165630.13 TPM= 22.18 Transcript Type= protein_coding
chr10	13693703	13891729	13693703	13891729	-	transcript585.chr10.nnic@FRMD4A	transcript585.chr10.nnic	protein_coding	13891624,13858847,13810814,13796496,13782922,13762624,13761647,13747736,13740512,13740194,13737844,13707037,13701340,13693703	13891729,13858912,13810908,13796588,13783006,13762680,13761669,13747819,13740577,13740251,13737930,13707113,13701478,13694039	Gene ID= ENSG00000151474.21 TPM= 2.34 Transcript Type= NA
chr10	13657790	13659584	13657790	13659584	-	transcript595.chr10.nnic@NA	transcript595.chr10.nnic	NA	13657790	13659584	Gene ID= novel_gene_chr10_596 TPM= 2.34 Transcript Type= NA
chr10	13702784	13704919	13702784	13704919	+	transcript593.chr10.nnic@NA	transcript593.chr10.nnic	NA	13702784	13704919	Gene ID= novel_gene_chr10_594 TPM= 2.34 Transcript Type= NA
chr10	14518560	14604400	14518560	14604400	-	transcript599.chr10.nnic@FAM107B	transcript599.chr10.nnic	protein_coding	14604240,14530332,14523416,14521869,14518560	14604400,14530515,14523551,14522019,14521306	Gene ID= ENSG00000065809.13 TPM= 5.25 Transcript Type= NA
chr10	14518559	14572189	14518559	14572189	-	ENST00000622567.4@FAM107B	ENST00000622567.4	protein_coding	14571763,14530332,14521869,14518559	14572189,14530515,14522019,14521306	Gene ID= ENSG00000065809.13 TPM= 8.76 Transcript Type= protein_coding
chr10	14519159	14604389	14519159	14604389	-	ENST00000468747.5@FAM107B	ENST00000468747.5	protein_coding	14604240,14530332,14521869,14519159	14604389,14530515,14522019,14521306	Gene ID= ENSG00000065809.13 TPM= 3.5 Transcript Type= protein_coding
chr10	14519513	14604418	14519513	14604418	-	ENST00000378467.8@FAM107B	ENST00000378467.8	protein_coding	14604240,14553322,14530332,14521869,14519513	14604418,14553387,14530515,14522019,14521306	Gene ID= ENSG00000065809.13 TPM= 8.17 Transcript Type= protein_coding
chr10	14524483	14527252	14524483	14527252	-	transcript613.chr10.nnic@NA	transcript613.chr10.nnic	NA	14524483	14527252	Gene ID= novel_gene_chr10_614 TPM= 2.34 Transcript Type= NA
chr10	14838164	14871741	14838164	14871741	+	ENST00000378372.7@HSPA14	ENST00000378372.7	protein_coding	14838164,14839905,14840075,14848609,14848790,14849721,14851219,14852370,14854125,14855841,14867083,14867736,14870597,14871528	14838459,14839985,14840157,14848657,14848895,14849811,14851323,14852531,14854280,14855943,14867295,14867909,14870667,14871741	Gene ID= ENSG00000187522.14 TPM= 19.85 Transcript Type= protein_coding
chr10	14838302	14844737	14838302	14844737	+	ENST00000437161.6@HSPA14	ENST00000437161.6	protein_coding	14838302,14839905,14840075,14843371	14838459,14839985,14840157,14844737	Gene ID= ENSG00000187522.14 TPM= 2.34 Transcript Type= protein_coding
chr10	14838166	14844727	14838166	14844727	+	ENST00000640019.1@AC069544.2	ENST00000640019.1	protein_coding	14838166,14839905,14840075,14842134,14843371	14838459,14839985,14840157,14842846,14844727	Gene ID= ENSG00000284024.1 TPM= 3.5 Transcript Type= protein_coding
chr10	14877688	14878686	14877688	14878686	-	ENST00000609399.1@AC069544.1	ENST00000609399.1	lincRNA	14877688	14878686	Gene ID= ENSG00000272853.1 TPM= 1.17 Transcript Type= lincRNA
chr10	14878820	14904315	14878820	14904315	+	ENST00000378331.5@SUV39H2	ENST00000378331.5	protein_coding	14878820,14896846,14899539,14901133,14902406	14878919,14897517,14899685,14901262,14904315	Gene ID= ENSG00000152455.15 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr10	14907879	14954095	14907879	14954095	-	ENST00000378246.6@DCLRE1C	ENST00000378246.6	protein_coding	14953902,14949036,14945105,14939810,14935463,14934703,14934380,14932854,14928016,14926843,14922981,14919738,14907879	14954095,14949087,14945189,14939869,14935564,14934775,14934520,14932955,14928152,14926897,14923069,14919832,14909330	Gene ID= ENSG00000152457.17 TPM= 2.34 Transcript Type= protein_coding
chr10	14908171	14954048	14908171	14954048	-	ENST00000378278.6@DCLRE1C	ENST00000378278.6	protein_coding	14953902,14949036,14945105,14939810,14936538,14935463,14934703,14934380,14932854,14928016,14926843,14922981,14919738,14908171	14954048,14949087,14945189,14939869,14936593,14935564,14934775,14934520,14932955,14928152,14926897,14923069,14919832,14909330	Gene ID= ENSG00000152457.17 TPM= 2.34 Transcript Type= protein_coding
chr10	14908171	14954072	14908171	14954072	-	ENST00000378258.5@DCLRE1C	ENST00000378258.5	protein_coding	14953902,14949036,14947525,14945105,14939810,14936538,14935463,14934703,14934380,14932854,14928016,14926843,14922981,14919738,14908171	14954072,14949087,14947609,14945189,14939869,14936593,14935564,14934775,14934520,14932955,14928152,14926897,14923069,14919832,14909330	Gene ID= ENSG00000152457.17 TPM= 1.17 Transcript Type= protein_coding
chr10	15043963	15073852	15043963	15073852	+	ENST00000378217.3@OLAH	ENST00000378217.3	protein_coding	15043963,15047126,15049635,15056824,15061724,15064403,15065584,15071795,15073087	15043986,15047320,15049765,15056982,15061862,15064502,15065753,15071877,15073852	Gene ID= ENSG00000152463.14 TPM= 1.17 Transcript Type= protein_coding
chr10	15097372	15104251	15097372	15104251	+	transcript648.chr10.nnic@RPP38	transcript648.chr10.nnic	protein_coding	15097372,15102222,15103305	15097799,15102336,15104251	Gene ID= ENSG00000152464.14 TPM= 2.8 Transcript Type= NA
chr10	15097382	15104257	15097382	15104257	+	ENST00000378197.4@RPP38	ENST00000378197.4	protein_coding	15097382,15102218,15103305	15097766,15102336,15104257	Gene ID= ENSG00000152464.14 TPM= 2.8 Transcript Type= protein_coding
chr10	15097180	15104254	15097180	15104254	+	ENST00000616640.1@RPP38	ENST00000616640.1	protein_coding	15097180,15103305	15097766,15104254	Gene ID= ENSG00000152464.14 TPM= 7.47 Transcript Type= protein_coding
chr10	15097180	15104251	15097180	15104251	+	ENST00000378203.5@RPP38	ENST00000378203.5	protein_coding	15097180,15102218,15103305	15097409,15102336,15104251	Gene ID= ENSG00000152464.14 TPM= 5.14 Transcript Type= protein_coding
chr10	15097331	15104255	15097331	15104255	+	ENST00000378202.5@RPP38	ENST00000378202.5	protein_coding	15097331,15103305	15097409,15104255	Gene ID= ENSG00000152464.14 TPM= 3.97 Transcript Type= protein_coding
chr10	15098841	15100340	15098841	15100340	-	transcript653.chr10.nnic@NA	transcript653.chr10.nnic	NA	15098841	15100340	Gene ID= novel_gene_chr10_654 TPM= 2.34 Transcript Type= NA
chr10	15107866	15168693	15107866	15168693	-	ENST00000378165.8@NMT2	ENST00000378165.8	protein_coding	15168503,15141422,15135274,15133245,15133053,15132817,15130142,15128350,15119343,15112796,15109702,15107866	15168693,15141557,15135418,15133363,15133144,15132933,15130312,15128458,15119513,15112963,15109839,15109215	Gene ID= ENSG00000152465.17 TPM= 2.34 Transcript Type= protein_coding
chr10	15211643	15371123	15211643	15371123	-	transcript658.chr10.nnic@FAM171A1	transcript658.chr10.nnic	protein_coding	15370956,15283878,15275855,15254721,15220944,15215996,15211643	15371123,15284105,15275947,15254879,15221060,15216110,15214601	Gene ID= ENSG00000148468.16 TPM= 2.34 Transcript Type= NA
chr10	15211643	15371166	15211643	15371166	-	transcript659.chr10.nic@FAM171A1	transcript659.chr10.nic	protein_coding	15370956,15283878,15275855,15254721,15248639,15220944,15211643	15371166,15284105,15275947,15254879,15248815,15221060,15214601	Gene ID= ENSG00000148468.16 TPM= 8.17 Transcript Type= NA
chr10	15211643	15371059	15211643	15371059	-	ENST00000378116.8@FAM171A1	ENST00000378116.8	protein_coding	15370956,15283878,15275855,15254721,15248639,15220944,15215996,15211643	15371059,15284105,15275947,15254879,15248815,15221060,15216110,15214601	Gene ID= ENSG00000148468.16 TPM= 47.87 Transcript Type= protein_coding
chr10	15513949	15720125	15513949	15720125	-	ENST00000378076.3@ITGA8	ENST00000378076.3	protein_coding	15719563,15718766,15687938,15684004,15678722,15677592,15672624,15671603,15660879,15658999,15655354,15646846,15644030,15616514,15613660,15608235,15607677,15606285,15605724,15604208,15597207,15592225,15586584,15575489,15572211,15558074,15548455,15531050,15519290,15513949	15720125,15718899,15688038,15684127,15678783,15677637,15672749,15671647,15660922,15659055,15655406,15647051,15644221,15616559,15613767,15608290,15607831,15606422,15605791,15604355,15597299,15592304,15586664,15575594,15572369,15558202,15548568,15531151,15519412,15517244	Gene ID= ENSG00000077943.7 TPM= 38.53 Transcript Type= protein_coding
chr10	15596513	15719926	15596513	15719926	-	transcript672.chr10.nic@ITGA8	transcript672.chr10.nic	protein_coding	15719563,15718766,15687938,15684004,15678722,15677592,15672624,15671603,15660879,15658999,15655354,15646846,15644030,15616514,15613660,15608235,15607677,15606285,15605724,15604208,15596513	15719926,15718899,15688038,15684127,15678783,15677637,15672749,15671647,15660922,15659055,15655406,15647051,15644221,15616559,15613767,15608290,15607831,15606422,15605791,15604355,15597299	Gene ID= ENSG00000077943.7 TPM= 2.34 Transcript Type= NA
chr10	15778170	15860520	15778170	15860520	-	ENST00000277632.7@MINDY3	ENST00000277632.7	protein_coding	15860206,15847864,15843212,15841426,15838228,15837204,15834543,15833630,15821656,15816835,15796100,15789247,15786561,15782155,15778170	15860520,15847943,15843272,15841599,15838279,15837318,15834616,15833709,15821726,15816915,15796172,15789319,15786648,15782226,15779141	Gene ID= ENSG00000148481.13 TPM= 19.85 Transcript Type= protein_coding
chr10	15778170	15860498	15778170	15860498	-	ENST00000477891.1@MINDY3	ENST00000477891.1	protein_coding	15860206,15847864,15843212,15841426,15837204,15834543,15833630,15821656,15816835,15796100,15789247,15786561,15782155,15778170	15860498,15847943,15843272,15841599,15837318,15834616,15833709,15821726,15816915,15796172,15789319,15786648,15782226,15779141	Gene ID= ENSG00000148481.13 TPM= 4.67 Transcript Type= processed_transcript
chr10	16436917	16513528	16436917	16513528	+	transcript696.chr10.nnic@PTER	transcript696.chr10.nnic	protein_coding	16436917,16437357,16467132,16484337,16486352,16505020,16511046	16437047,16437490,16467210,16484816,16486617,16505160,16513528	Gene ID= ENSG00000165983.14 TPM= 2.34 Transcript Type= NA
chr10	16436943	16513745	16436943	16513745	+	ENST00000423462.6@PTER	ENST00000423462.6	protein_coding	16436943,16486352,16505020,16511046	16437047,16486617,16505160,16513745	Gene ID= ENSG00000165983.14 TPM= 2.34 Transcript Type= protein_coding
chr10	16440069	16444476	16440069	16444476	-	transcript709.chr10.nnic@NA	transcript709.chr10.nnic	NA	16440069	16444476	Gene ID= novel_gene_chr10_710 TPM= 5.84 Transcript Type= NA
chr10	16590611	16817528	16590611	16817528	-	ENST00000345264.9@RSU1	ENST00000345264.9	protein_coding	16817315,16816973,16782034,16764390,16754871,16752918,16752539,16695023,16590611	16817528,16817084,16782084,16764510,16754989,16753000,16752653,16695155,16593496	Gene ID= ENSG00000148484.17 TPM= 58.96 Transcript Type= protein_coding
chr10	16590620	16817454	16590620	16817454	-	ENST00000602389.1@RSU1	ENST00000602389.1	protein_coding	16817315,16782034,16764390,16754871,16752918,16752539,16695023,16590620	16817454,16782084,16764510,16754989,16753000,16752653,16695155,16593496	Gene ID= ENSG00000148484.17 TPM= 12.26 Transcript Type= protein_coding
chr10	16757002	16760530	16757002	16760530	+	transcript727.chr10.nnic@NA	transcript727.chr10.nnic	NA	16757002	16760530	Gene ID= novel_gene_chr10_728 TPM= 2.34 Transcript Type= NA
chr10	16771222	16774111	16771222	16774111	+	transcript729.chr10.nnic@NA	transcript729.chr10.nnic	NA	16771222	16774111	Gene ID= novel_gene_chr10_730 TPM= 2.34 Transcript Type= NA
chr10	17146737	17201682	17146737	17201682	-	ENST00000377799.7@TRDMT1	ENST00000377799.7	protein_coding	17201571,17174551,17168841,17162166,17161483,17160305,17159146,17157441,17154677,17153507,17146737	17201682,17174660,17168917,17162237,17161548,17160374,17159229,17157784,17154734,17153636,17149140	Gene ID= ENSG00000107614.21 TPM= 4.67 Transcript Type= protein_coding
chr10	17228259	17237592	17228259	17237592	+	ENST00000544301.6@VIM	ENST00000544301.6	protein_coding	17228259,17229276,17230650,17233587,17233770,17234693,17235169,17235846,17236294,17237230	17228524,17229985,17230710,17233682,17233931,17234818,17235389,17235889,17236379,17237592	Gene ID= ENSG00000026025.15 TPM= 1098.51 Transcript Type= protein_coding
chr10	17229278	17237593	17229278	17237593	+	ENST00000224237.9@VIM	ENST00000224237.9	protein_coding	17229278,17230650,17233587,17233770,17234693,17235169,17235846,17236294,17237230	17229985,17230710,17233682,17233931,17234818,17235389,17235889,17236379,17237593	Gene ID= ENSG00000026025.15 TPM= 1013.27 Transcript Type= protein_coding
chr10	17229278	17237593	17229278	17237593	+	ENST00000487938.5@VIM	ENST00000487938.5	protein_coding	17229278,17230650,17233587,17233770,17234693,17235169,17235846,17237230	17229985,17230710,17233682,17233931,17234818,17235389,17236379,17237593	Gene ID= ENSG00000026025.15 TPM= 5.45 Transcript Type= nonsense_mediated_decay
chr10	17602073	17617416	17602073	17617416	-	transcript792.chr10.nic@HACD1	transcript792.chr10.nic	protein_coding	17617083,17603930,17602073	17617416,17604047,17603744	Gene ID= ENSG00000165996.13 TPM= 2.34 Transcript Type= NA
chr10	17589032	17617377	17589032	17617377	-	ENST00000361271.7@HACD1	ENST00000361271.7	protein_coding	17617083,17603930,17603726,17603560,17599290,17594205,17589032	17617377,17604047,17603744,17603648,17599411,17594383,17590446	Gene ID= ENSG00000165996.13 TPM= 2.34 Transcript Type= protein_coding
chr10	17615477	17617367	17615477	17617367	-	ENST00000326961.6@HACD1	ENST00000326961.6	protein_coding	17617083,17615477	17617367,17615964	Gene ID= ENSG00000165996.13 TPM= 1.17 Transcript Type= protein_coding
chr10	17644125	17715914	17644125	17715914	+	ENST00000377524.7@STAM	ENST00000377524.7	protein_coding	17644125,17660464,17684675,17684832,17688027,17693222,17695049,17696775,17700191,17704431,17704970,17705588,17708776,17714543	17644379,17660548,17684750,17684927,17688173,17693312,17695241,17696869,17700279,17704518,17705024,17705741,17708951,17715914	Gene ID= ENSG00000136738.14 TPM= 29.77 Transcript Type= protein_coding
chr10	17644138	17715914	17644138	17715914	+	transcript801.chr10.nic@STAM	transcript801.chr10.nic	protein_coding	17644138,17660464,17684675,17684832,17688027,17693222,17696775,17700191,17704431,17704970,17705588,17708776,17714543	17644379,17660548,17684750,17684927,17688173,17695241,17696869,17700279,17704518,17705024,17705741,17708951,17715914	Gene ID= ENSG00000136738.14 TPM= 2.92 Transcript Type= NA
chr10	17809344	17911170	17809344	17911170	+	ENST00000569591.2@MRC1	ENST00000569591.2	protein_coding	17809344,17823074,17827542,17833675,17840693,17845289,17849579,17852967,17856242,17861387,17863534,17866562,17870246,17870848,17871982,17873784,17875090,17877900,17879721,17880525,17881067,17885269,17894210,17898034,17900788,17901973,17906886,17907534,17909306,17910215	17809526,17823475,17827715,17833839,17840806,17845435,17849764,17853124,17856352,17861502,17863682,17866761,17870373,17870935,17872126,17873825,17875253,17877967,17879821,17880670,17881181,17885435,17894312,17898266,17900953,17902122,17906999,17907698,17909347,17911170	Gene ID= ENSG00000260314.2 TPM= 370.13 Transcript Type= protein_coding
chr10	17850258	17853040	17850258	17853040	-	transcript835.chr10.nnic@NA	transcript835.chr10.nnic	NA	17850258	17853040	Gene ID= novel_gene_chr10_836 TPM= 3.5 Transcript Type= NA
chr10	17864772	17867109	17864772	17867109	-	transcript837.chr10.nnic@NA	transcript837.chr10.nnic	NA	17864772	17867109	Gene ID= novel_gene_chr10_838 TPM= 3.5 Transcript Type= NA
chr10	18541588	18545879	18541588	18545879	+	transcript845.chr10.nnic@NA	transcript845.chr10.nnic	NA	18541588	18545879	Gene ID= novel_gene_chr10_846 TPM= 4.67 Transcript Type= NA
chr10	18545561	18651622	18545561	18651622	-	ENST00000377304.6@NSUN6	ENST00000377304.6	protein_coding	18651129,18648490,18642476,18616184,18614460,18609845,18596208,18585949,18551823,18548112,18545561	18651622,18648645,18642555,18616293,18614613,18609926,18596327,18586093,18551971,18548237,18546145	Gene ID= ENSG00000241058.3 TPM= 4.67 Transcript Type= protein_coding
chr10	18659371	18680922	18659371	18680922	+	transcript852.chr10.nnic@ARL5B	transcript852.chr10.nnic	protein_coding	18659371,18666575,18668530,18673984,18675168	18659683,18666635,18668677,18674135,18680922	Gene ID= ENSG00000165997.4 TPM= 2.34 Transcript Type= NA
chr10	18659405	18681639	18659405	18681639	+	ENST00000377275.3@ARL5B	ENST00000377275.3	protein_coding	18659405,18666575,18668530,18672622,18673984,18675168	18659683,18666635,18668677,18672705,18674135,18681639	Gene ID= ENSG00000165997.4 TPM= 8.17 Transcript Type= protein_coding
chr10	19816239	20289856	19816239	20289856	+	ENST00000377252.4@PLXDC2	ENST00000377252.4	protein_coding	19816239,20001775,20046869,20068170,20143295,20147784,20164468,20176999,20177328,20211669,20217426,20219064,20245345,20279703	19817191,20001986,20047015,20068239,20143417,20147902,20164567,20177094,20177409,20211729,20217576,20219102,20245505,20289856	Gene ID= ENSG00000120594.16 TPM= 169.3 Transcript Type= protein_coding
chr10	19816609	19820653	19816609	19820653	+	transcript862.chr10.nnic@NA	transcript862.chr10.nnic	NA	19816609	19820653	Gene ID= novel_gene_chr10_863 TPM= 5.84 Transcript Type= NA
chr10	19892923	19897986	19892923	19897986	-	transcript872.chr10.nnic@NA	transcript872.chr10.nnic	NA	19892923	19897986	Gene ID= novel_gene_chr10_873 TPM= 3.5 Transcript Type= NA
chr10	20075800	20079983	20075800	20079983	+	transcript868.chr10.nnic@NA	transcript868.chr10.nnic	NA	20075800	20079983	Gene ID= novel_gene_chr10_869 TPM= 2.34 Transcript Type= NA
chr10	21168776	21171360	21168776	21171360	+	transcript895.chr10.nnic@NA	transcript895.chr10.nnic	NA	21168776	21171360	Gene ID= novel_gene_chr10_896 TPM= 42.03 Transcript Type= NA
chr10	21492658	21497262	21492658	21497262	-	ENST00000377113.5@CASC10	ENST00000377113.5	protein_coding	21496750,21492658	21497262,21495945	Gene ID= ENSG00000204682.5 TPM= 2.34 Transcript Type= protein_coding
chr10	21534173	21743630	21534173	21743630	+	ENST00000377072.7@MLLT10	ENST00000377072.7	protein_coding	21534173,21534645,21538833,21586294,21595331,21612348,21614831,21617112,21651673,21670449,21673350,21681332,21682225,21688491,21713772,21726244,21727856,21730900,21732899,21733504,21733768,21735139,21740154,21741939	21534520,21534804,21538912,21586348,21595440,21612451,21614924,21617207,21651768,21670704,21673919,21681376,21682257,21688538,21713950,21726355,21727928,21731054,21733087,21733592,21734129,21735235,21740236,21743630	Gene ID= ENSG00000078403.16 TPM= 1.17 Transcript Type= protein_coding
chr10	21534165	21557182	21534165	21557182	+	ENST00000377100.7@MLLT10	ENST00000377100.7	protein_coding	21534165,21534645,21538833,21556643	21534520,21534804,21538912,21557182	Gene ID= ENSG00000078403.16 TPM= 1.17 Transcript Type= protein_coding
chr10	21919889	22003734	21919889	22003734	-	transcript913.chr10.nic@DNAJC1	transcript913.chr10.nic	protein_coding	22003213,21929040,21928506,21920798,21919889	22003734,21929141,21928552,21920963,21919929	Gene ID= ENSG00000136770.10 TPM= 4.67 Transcript Type= NA
chr10	21756537	22003725	21756537	22003725	-	ENST00000376980.7@DNAJC1	ENST00000376980.7	protein_coding	22003213,21929040,21928506,21920798,21919832,21918779,21904522,21882282,21805980,21766261,21759170,21756537	22003725,21929141,21928552,21920963,21919929,21918872,21904612,21882439,21806099,21766309,21759618,21756755	Gene ID= ENSG00000136770.10 TPM= 92.24 Transcript Type= protein_coding
chr10	22252072	22257150	22252072	22257150	+	transcript916.chr10.nnic@NA	transcript916.chr10.nnic	NA	22252072	22257150	Gene ID= novel_gene_chr10_917 TPM= 5.84 Transcript Type= NA
chr10	22315974	22320308	22315974	22320308	+	ENST00000376836.7@COMMD3	ENST00000376836.7	protein_coding	22315974,22317884,22318105,22318272,22318653,22318806,22318959,22319939	22316556,22317995,22318168,22318306,22318713,22318862,22319018,22320308	Gene ID= ENSG00000148444.15 TPM= 41.25 Transcript Type= protein_coding
chr10	22316386	22320306	22316386	22320306	+	transcript922.chr10.nic@COMMD3	transcript922.chr10.nic	protein_coding	22316386,22317884,22318105,22318272,22318806,22318959,22319939	22316556,22317995,22318168,22318713,22318862,22319018,22320306	Gene ID= ENSG00000148444.15 TPM= 3.89 Transcript Type= NA
chr10	22316386	22320306	22316386	22320306	+	transcript924.chr10.nic@COMMD3	transcript924.chr10.nic	protein_coding	22316386,22317884,22318105,22318272,22318959,22319939	22316556,22317995,22318168,22318862,22319018,22320306	Gene ID= ENSG00000148444.15 TPM= 2.72 Transcript Type= NA
chr10	22316386	22320306	22316386	22320306	+	transcript929.chr10.nic@COMMD3-BMI1	transcript929.chr10.nic	protein_coding	22316386,22317884,22318105	22316556,22317995,22320306	Gene ID= ENSG00000269897.5 TPM= 2.34 Transcript Type= NA
chr10	22321211	22331484	22321211	22331484	+	ENST00000376663.7@BMI1	ENST00000376663.7	protein_coding	22321211,22326431,22326890,22327595,22327742,22327950,22328134,22328600,22329048,22329213	22321696,22326561,22326986,22327650,22327792,22328058,22328179,22328698,22329128,22331484	Gene ID= ENSG00000168283.13 TPM= 28.02 Transcript Type= protein_coding
chr10	22435431	22437844	22435431	22437844	-	transcript947.chr10.nnic@NA	transcript947.chr10.nnic	NA	22435431	22437844	Gene ID= novel_gene_chr10_948 TPM= 5.84 Transcript Type= NA
chr10	22534849	22714555	22534849	22714555	-	ENST00000376573.8@PIP4K2A	ENST00000376573.8	protein_coding	22714183,22609620,22607927,22591629,22573311,22567851,22550659,22541804,22539971,22534849	22714555,22609717,22608023,22591781,22573457,22567889,22550772,22542047,22540074,22537281	Gene ID= ENSG00000150867.13 TPM= 120.26 Transcript Type= protein_coding
chr10	22596183	22601161	22596183	22601161	+	transcript960.chr10.nnic@NA	transcript960.chr10.nnic	NA	22596183	22601161	Gene ID= novel_gene_chr10_961 TPM= 11.68 Transcript Type= NA
chr10	22703978	22705460	22703978	22705460	+	transcript962.chr10.nnic@NA	transcript962.chr10.nnic	NA	22703978	22705460	Gene ID= novel_gene_chr10_963 TPM= 7.01 Transcript Type= NA
chr10	23095506	23122013	23095506	23122013	+	ENST00000376510.7@MSRB2	ENST00000376510.7	protein_coding	23095506,23104144,23110242,23119304,23120758	23095726,23104244,23110318,23119451,23122013	Gene ID= ENSG00000148450.12 TPM= 29.19 Transcript Type= protein_coding
chr10	23316587	23344834	23316587	23344834	-	transcript971.chr10.nnic@C10orf67	transcript971.chr10.nnic	protein_coding	23344569,23333062,23322394,23320741,23316587	23344834,23333182,23322537,23320815,23316912	Gene ID= ENSG00000179133.12 TPM= 2.34 Transcript Type= NA
chr10	23316737	23344845	23316737	23344845	-	ENST00000323327.4@C10orf67	ENST00000323327.4	protein_coding	23344569,23333062,23322394,23320741,23316737	23344845,23333182,23322537,23320815,23318918	Gene ID= ENSG00000179133.12 TPM= 1.17 Transcript Type= protein_coding
chr10	23342723	23361155	23342723	23361155	+	transcript977.chr10.nnic@AL606469.1	transcript977.chr10.nnic	antisense_RNA	23342723,23343979,23358489	23342940,23344090,23361155	Gene ID= ENSG00000224215.1 TPM= 7.01 Transcript Type= NA
chr10	23344203	23345647	23344203	23345647	+	transcript984.chr10.nnic@NA	transcript984.chr10.nnic	NA	23344203	23345647	Gene ID= novel_gene_chr10_985 TPM= 2.34 Transcript Type= NA
chr10	23366533	23368327	23366533	23368327	-	transcript986.chr10.nnic@NA	transcript986.chr10.nnic	NA	23366533	23368327	Gene ID= novel_gene_chr10_987 TPM= 4.67 Transcript Type= NA
chr10	23439458	23442390	23439458	23442390	+	ENST00000376495.4@OTUD1	ENST00000376495.4	protein_coding	23439458	23442390	Gene ID= ENSG00000165312.6 TPM= 9.34 Transcript Type= protein_coding
chr10	24118675	24546154	24118675	24546154	+	transcript999.chr10.nnic@KIAA1217	transcript999.chr10.nnic	protein_coding	24118675,24219626,24380869,24432995,24438386,24473228,24494498,24495143,24501377,24513257,24520123,24521780,24524323,24527936,24531833,24533068,24536774,24544981,24545827	24118921,24219909,24381067,24433193,24438479,24474060,24494604,24495196,24501545,24513434,24520253,24521929,24524764,24528119,24531995,24533237,24536893,24545103,24546154	Gene ID= ENSG00000120549.17 TPM= 2.34 Transcript Type= NA
chr10	24466531	24547843	24466531	24547843	+	ENST00000376451.4@KIAA1217	ENST00000376451.4	protein_coding	24466531,24473228,24495147,24501379,24513259,24520123,24521782,24524323,24527936,24531830,24533070,24536774,24542693,24542883,24544981	24466790,24474060,24495196,24501545,24513434,24520253,24521929,24524764,24528119,24531993,24533237,24536893,24542770,24544481,24547843	Gene ID= ENSG00000120549.17 TPM= 1.17 Transcript Type= protein_coding
chr10	24629524	24723900	24629524	24723900	-	transcript1011.chr10.nic@ARHGAP21	transcript1011.chr10.nic	protein_coding	24723562,24721837,24670218,24666985,24635011,24633402,24629996,24629524	24723900,24722279,24670397,24667009,24635103,24633480,24630050,24629862	Gene ID= ENSG00000107863.17 TPM= 2.34 Transcript Type= NA
chr10	24629014	24723969	24629014	24723969	-	transcript1012.chr10.nic@ARHGAP21	transcript1012.chr10.nic	protein_coding	24723562,24721837,24670218,24666985,24635011,24633402,24629014	24723969,24722279,24670397,24667009,24635103,24633480,24630050	Gene ID= ENSG00000107863.17 TPM= 8.17 Transcript Type= NA
chr10	24583609	24723668	24583609	24723668	-	ENST00000396432.6@ARHGAP21	ENST00000396432.6	protein_coding	24723562,24721837,24670218,24666985,24635011,24633402,24629996,24622733,24619473,24607745,24607499,24604312,24601978,24600646,24597945,24597447,24596740,24595888,24595717,24595117,24594950,24591887,24591642,24591225,24589271,24583609	24723668,24722279,24670397,24667009,24635103,24633480,24630050,24622762,24621369,24607903,24607601,24604348,24602103,24600930,24598009,24597583,24596882,24596043,24595795,24595190,24595039,24592012,24591683,24591330,24589302,24586106	Gene ID= ENSG00000107863.17 TPM= 19.85 Transcript Type= protein_coding
chr10	24848607	24952604	24848607	24952604	-	ENST00000320152.10@PRTFDC1	ENST00000320152.10	protein_coding	24952528,24942330,24937184,24871998,24858392,24856913,24855318,24851388,24848607	24952604,24942436,24937367,24872063,24858409,24856995,24855364,24851464,24849891	Gene ID= ENSG00000099256.18 TPM= 3.5 Transcript Type= protein_coding
chr10	25016658	25026664	25016658	25026664	+	ENST00000524413.5@THNSL1	ENST00000524413.5	protein_coding	25016658,25021742,25023176	25016789,25021908,25026664	Gene ID= ENSG00000185875.12 TPM= 1.17 Transcript Type= protein_coding
chr10	25016658	25026664	25016658	25026664	+	ENST00000376356.4@THNSL1	ENST00000376356.4	protein_coding	25016658,25021742,25023176	25016692,25021908,25026664	Gene ID= ENSG00000185875.12 TPM= 4.67 Transcript Type= protein_coding
chr10	26441643	26445104	26441643	26445104	+	transcript1024.chr10.nnic@NA	transcript1024.chr10.nnic	NA	26441643	26445104	Gene ID= novel_gene_chr10_1025 TPM= 2.34 Transcript Type= NA
chr10	26663443	26693171	26663443	26693171	-	transcript1026.chr10.nnic@AL390961.1	transcript1026.chr10.nnic	transcribed_unitary_pseudogene	26693038,26683868,26676116,26668407,26663443	26693171,26683937,26676165,26668494,26664392	Gene ID= ENSG00000227932.2 TPM= 2.34 Transcript Type= NA
chr10	26746596	26861087	26746596	26861087	-	ENST00000376137.8@ABI1	ENST00000376137.8	protein_coding	26860747,26823138,26777065,26771075,26770245,26768852,26765218,26755655,26751598,26746596	26861087,26823305,26777241,26771089,26770345,26768992,26765318,26755741,26751783,26748745	Gene ID= ENSG00000136754.17 TPM= 1.17 Transcript Type= protein_coding
chr10	26746596	26861087	26746596	26861087	-	ENST00000536334.5@ABI1	ENST00000536334.5	protein_coding	26860747,26823138,26777065,26771075,26770245,26768852,26765218,26751598,26746596	26861087,26823305,26777241,26771089,26770345,26768992,26765318,26751783,26748745	Gene ID= ENSG00000136754.17 TPM= 2.34 Transcript Type= protein_coding
chr10	26773216	26861021	26773216	26861021	-	transcript1061.chr10.nic@ABI1	transcript1061.chr10.nic	protein_coding	26860747,26823138,26773216	26861021,26823305,26777241	Gene ID= ENSG00000136754.17 TPM= 3.5 Transcript Type= NA
chr10	26746593	26860986	26746593	26860986	-	ENST00000376166.5@ABI1	ENST00000376166.5	protein_coding	26860747,26823138,26777065,26770245,26768852,26765218,26759062,26751598,26746593	26860986,26823305,26777241,26770345,26768992,26765318,26759235,26751783,26748745	Gene ID= ENSG00000136754.17 TPM= 1.75 Transcript Type= protein_coding
chr10	26746593	26860973	26746593	26860973	-	ENST00000376160.5@ABI1	ENST00000376160.5	protein_coding	26860747,26823138,26777065,26770245,26768852,26765218,26759062,26755655,26751598,26746593	26860973,26823305,26777241,26770345,26768992,26765318,26759235,26755741,26751783,26748745	Gene ID= ENSG00000136754.17 TPM= 5.25 Transcript Type= protein_coding
chr10	26755767	26758092	26755767	26758092	+	transcript1064.chr10.nnic@NA	transcript1064.chr10.nnic	NA	26755767	26758092	Gene ID= novel_gene_chr10_1065 TPM= 15.18 Transcript Type= NA
chr10	27035636	27100505	27035636	27100505	-	transcript1068.chr10.nic@ANKRD26	transcript1068.chr10.nic	protein_coding	27100085,27093685,27093349,27092406,27086539,27082803,27079089,27077633,27077338,27067157,27066487,27063988,27061144,27060512,27060345,27053320,27048801,27046353,27044157,27043426,27039965,27037871,27037186,27035636	27100505,27093799,27093522,27092512,27086609,27082833,27079161,27077693,27077540,27067286,27066548,27064081,27061242,27060540,27060417,27053390,27048979,27046523,27044190,27043567,27040178,27038054,27037323,27035752	Gene ID= ENSG00000107890.16 TPM= 2.34 Transcript Type= NA
chr10	27110454	27154392	27110454	27154392	-	ENST00000376016.7@YME1L1	ENST00000376016.7	protein_coding	27154178,27148906,27145428,27142387,27136276,27134831,27134039,27131859,27126696,27123547,27122841,27121386,27120435,27119294,27117576,27116219,27116060,27114521,27110454	27154392,27149040,27145590,27142485,27136385,27134981,27134122,27131941,27126786,27123699,27122973,27121448,27120547,27119449,27117727,27116345,27116133,27114607,27112120	Gene ID= ENSG00000136758.18 TPM= 79.4 Transcript Type= protein_coding
chr10	27195217	27240862	27195217	27240862	-	transcript1091.chr10.nic@ACBD5	transcript1091.chr10.nic	protein_coding	27240674,27240319,27235092,27231748,27223338,27223207,27219723,27217980,27215535,27210814,27208246,27205198,27204440,27195217	27240862,27240484,27235212,27231820,27223452,27223239,27219857,27218183,27215641,27211081,27208445,27205248,27204549,27197442	Gene ID= ENSG00000107897.18 TPM= 11.26 Transcript Type= NA
chr10	27195217	27242111	27195217	27242111	-	transcript1092.chr10.nic@ACBD5	transcript1092.chr10.nic	protein_coding	27242059,27240319,27235092,27231748,27223338,27223207,27219723,27217980,27215535,27210814,27208246,27205198,27204440,27195217	27242111,27240484,27235212,27231820,27223452,27223239,27219857,27218183,27215641,27211081,27208445,27205248,27204549,27197442	Gene ID= ENSG00000107897.18 TPM= 4.25 Transcript Type= NA
chr10	27195217	27240888	27195217	27240888	-	transcript1095.chr10.nic@ACBD5	transcript1095.chr10.nic	protein_coding	27240674,27240319,27235092,27231748,27223338,27219723,27217980,27215535,27210814,27208246,27205198,27204440,27195217	27240888,27240474,27235212,27231820,27223452,27219857,27218183,27215641,27211081,27208445,27205248,27204549,27197442	Gene ID= ENSG00000107897.18 TPM= 9.8 Transcript Type= NA
chr10	27195217	27242130	27195217	27242130	-	ENST00000375905.8@ACBD5	ENST00000375905.8	protein_coding	27242059,27240319,27235092,27231748,27223338,27219723,27217980,27215535,27210814,27208246,27205198,27204440,27195217	27242130,27240484,27235212,27231820,27223452,27219857,27218183,27215641,27211081,27208445,27205248,27204549,27197442	Gene ID= ENSG00000107897.18 TPM= 6.69 Transcript Type= protein_coding
chr10	27195217	27240811	27195217	27240811	-	transcript1099.chr10.nnic@ACBD5	transcript1099.chr10.nnic	protein_coding	27240674,27240319,27235092,27231748,27223338,27223207,27219723,27215535,27210814,27208246,27205198,27204440,27195217	27240811,27240474,27235212,27231820,27223452,27223239,27219857,27215641,27211081,27208445,27205248,27204549,27197442	Gene ID= ENSG00000107897.18 TPM= 2.5 Transcript Type= NA
chr10	27195215	27240879	27195215	27240879	-	ENST00000375897.7@ACBD5	ENST00000375897.7	protein_coding	27240319,27235092,27231748,27223338,27219723,27217980,27215535,27210814,27208246,27205198,27204440,27195215	27240879,27235212,27231820,27223452,27219857,27218183,27215641,27211081,27208445,27205248,27204549,27197442	Gene ID= ENSG00000107897.18 TPM= 17.2 Transcript Type= protein_coding
chr10	27195214	27240815	27195214	27240815	-	ENST00000396271.7@ACBD5	ENST00000396271.7	protein_coding	27240674,27240319,27235092,27231748,27223338,27219723,27217980,27215535,27210814,27208246,27205198,27204440,27195214	27240815,27240484,27235212,27231820,27223452,27219857,27218183,27215641,27211081,27208445,27205248,27204549,27197442	Gene ID= ENSG00000107897.18 TPM= 28.87 Transcript Type= protein_coding
chr10	28051168	28303030	28051168	28303030	-	transcript1127.chr10.nnic@MPP7	transcript1127.chr10.nnic	protein_coding	28302861,28254774,28238568,28202153,28149982,28147483,28131560,28125010,28124031,28120594,28120194,28119651,28089671,28069772,28059650,28058495,28056480,28051168	28303030,28254876,28238735,28202271,28150059,28147563,28131691,28125091,28124116,28120668,28120390,28119715,28089841,28069852,28059743,28058603,28056623,28054244	Gene ID= ENSG00000150054.18 TPM= 2.34 Transcript Type= NA
chr10	28050993	28303072	28050993	28303072	-	transcript1128.chr10.nnic@MPP7	transcript1128.chr10.nnic	protein_coding	28302861,28238568,28202153,28149982,28147483,28131560,28125010,28124031,28120594,28120194,28119651,28089671,28069772,28059650,28058495,28056480,28050993	28303072,28238735,28202271,28150059,28147563,28131691,28125091,28124116,28120668,28120390,28119715,28089841,28069852,28059743,28058603,28056623,28054244	Gene ID= ENSG00000150054.18 TPM= 5.84 Transcript Type= NA
chr10	28057606	28303072	28057606	28303072	-	transcript1136.chr10.nnic@MPP7	transcript1136.chr10.nnic	protein_coding	28302861,28238568,28202153,28149982,28147483,28131560,28125010,28124031,28120594,28120194,28119651,28089671,28069772,28059650,28057606	28303072,28238735,28202271,28150059,28147563,28131691,28125091,28124116,28120668,28120390,28119715,28089841,28069852,28059743,28058603	Gene ID= ENSG00000150054.18 TPM= 2.34 Transcript Type= NA
chr10	28522662	28532675	28522662	28532675	-	transcript1173.chr10.nnic@WAC-AS1	transcript1173.chr10.nnic	antisense_RNA	28532442,28525663,28522662	28532675,28526008,28525265	Gene ID= ENSG00000254635.5 TPM= 2.34 Transcript Type= NA
chr10	28522652	28532743	28522652	28532743	-	ENST00000527986.5@WAC-AS1	ENST00000527986.5	antisense_RNA	28532442,28525948,28522652	28532743,28526008,28524611	Gene ID= ENSG00000254635.5 TPM= 7.01 Transcript Type= antisense_RNA
chr10	28526469	28528474	28526469	28528474	+	transcript1179.chr10.nnic@NA	transcript1179.chr10.nnic	NA	28526469	28528474	Gene ID= novel_gene_chr10_1180 TPM= 2.34 Transcript Type= NA
chr10	28533119	28620991	28533119	28620991	+	transcript1147.chr10.nnic@WAC	transcript1147.chr10.nnic	protein_coding	28533119,28533504,28533998,28535562,28583399,28589736,28590720,28595733,28608186,28610699,28611774,28614567,28616173,28617657,28619537	28533151,28533620,28534034,28535757,28583505,28589851,28590832,28596041,28608431,28610821,28611922,28614685,28616362,28617784,28620991	Gene ID= ENSG00000095787.21 TPM= 18.1 Transcript Type= NA
chr10	28532779	28620543	28532779	28620543	+	transcript1162.chr10.nnic@WAC	transcript1162.chr10.nnic	protein_coding	28532779,28533998,28535544,28583399,28589736,28590720,28608186,28610699,28611774,28614567,28616173,28617657,28619537	28533007,28534034,28535757,28583505,28589851,28590832,28608431,28610821,28611922,28614685,28616362,28617784,28620543	Gene ID= ENSG00000095787.21 TPM= 3.5 Transcript Type= NA
chr10	28677342	28682939	28677342	28682939	+	ENST00000375533.5@BAMBI	ENST00000375533.5	protein_coding	28677342,28681258,28681983	28677973,28681545,28682939	Gene ID= ENSG00000095739.10 TPM= 19.85 Transcript Type= protein_coding
chr10	29409534	29419803	29409534	29419803	+	transcript1227.chr10.nic@SVIL-AS1	transcript1227.chr10.nic	antisense_RNA	29409534,29415357	29409658,29419803	Gene ID= ENSG00000224597.9 TPM= 2.34 Transcript Type= NA
chr10	29409572	29422372	29409572	29422372	+	ENST00000427063.6@SVIL-AS1	ENST00000427063.6	antisense_RNA	29409572,29415357,29420491	29409658,29415412,29422372	Gene ID= ENSG00000224597.9 TPM= 8.17 Transcript Type= antisense_RNA
chr10	29424730	29427649	29424730	29427649	+	transcript1228.chr10.nnic@NA	transcript1228.chr10.nnic	NA	29424730	29427649	Gene ID= novel_gene_chr10_1229 TPM= 4.67 Transcript Type= NA
chr10	29457338	29737052	29457338	29737052	-	transcript1188.chr10.nic@SVIL	transcript1188.chr10.nic	protein_coding	29736685,29686553,29657969,29569255,29563201,29555051,29554783,29550597,29531254,29530607,29529705,29524472,29523451,29522410,29512735,29499116,29495092,29494914,29493214,29490847,29488601,29487163,29486410,29486085,29484656,29481584,29480537,29473838,29471138,29470276,29467742,29465595,29463492,29462277,29458434,29457338	29737052,29686651,29658068,29569312,29563292,29555108,29554934,29551263,29531288,29530668,29529844,29524715,29524027,29522635,29512861,29499263,29495181,29495000,29493391,29491019,29488756,29487299,29486557,29486230,29484831,29481728,29480813,29473989,29471243,29470483,29467875,29465750,29463635,29462401,29458589,29458333	Gene ID= ENSG00000197321.14 TPM= 31.53 Transcript Type= NA
chr10	29655875	29735883	29655875	29735883	-	transcript1225.chr10.nic@SVIL	transcript1225.chr10.nic	protein_coding	29735751,29686553,29655875	29735883,29686651,29658068	Gene ID= ENSG00000197321.14 TPM= 2.34 Transcript Type= NA
chr10	29458993	29460966	29458993	29460966	-	transcript1232.chr10.nnic@NA	transcript1232.chr10.nnic	NA	29458993	29460966	Gene ID= novel_gene_chr10_1233 TPM= 4.67 Transcript Type= NA
chr10	30012800	30059524	30012800	30059524	-	ENST00000375377.1@JCAD	ENST00000375377.1	protein_coding	30059482,30047532,30026103,30012800	30059524,30047871,30029866,30017917	Gene ID= ENSG00000165757.8 TPM= 67.72 Transcript Type= protein_coding
chr10	30309801	30349319	30309801	30349319	-	ENST00000263063.8@MTPAP	ENST00000263063.8	protein_coding	30349119,30341468,30340226,30336803,30326424,30322391,30316118,30315963,30309801	30349319,30341640,30340450,30337027,30326635,30322617,30316210,30316036,30313971	Gene ID= ENSG00000107951.14 TPM= 134.27 Transcript Type= protein_coding
chr10	30433937	30461832	30433937	30461832	+	ENST00000263056.5@MAP3K8	ENST00000263056.5	protein_coding	30433937,30437176,30438916,30447782,30450258,30451638,30458084,30459255,30460706	30434378,30437406,30439274,30447949,30450519,30451744,30458236,30459501,30461832	Gene ID= ENSG00000107968.9 TPM= 1.17 Transcript Type= protein_coding
chr10	30434021	30461833	30434021	30461833	+	ENST00000542547.5@MAP3K8	ENST00000542547.5	protein_coding	30434021,30438916,30447782,30450258,30451638,30458084,30459255,30460706	30434378,30439274,30447949,30450519,30451744,30458236,30459501,30461833	Gene ID= ENSG00000107968.9 TPM= 4.67 Transcript Type= protein_coding
chr10	30434106	30436710	30434106	30436710	+	transcript1253.chr10.nnic@NA	transcript1253.chr10.nnic	NA	30434106	30436710	Gene ID= novel_gene_chr10_1254 TPM= 5.84 Transcript Type= NA
chr10	30928007	30999507	30928007	30999507	-	transcript1271.chr10.nnic@ZNF438	transcript1271.chr10.nnic	protein_coding	30999338,30984369,30941575,30928007	30999507,30984426,30941651,30930779	Gene ID= ENSG00000183621.15 TPM= 9.34 Transcript Type= NA
chr10	30844638	31031937	30844638	31031937	-	ENST00000436087.6@ZNF438	ENST00000436087.6	protein_coding	31031833,30984369,30941575,30908933,30876998,30848531,30844638	31031937,30984426,30941651,30909015,30877065,30850367,30845573	Gene ID= ENSG00000183621.15 TPM= 5.84 Transcript Type= protein_coding
chr10	31316528	31319030	31316528	31319030	-	ENST00000607166.1@ZEB1-AS1	ENST00000607166.1	antisense_RNA	31316528	31319030	Gene ID= ENSG00000237036.4 TPM= 9.34 Transcript Type= antisense_RNA
chr10	31319216	31529814	31319216	31529814	+	ENST00000437844.6@ZEB1	ENST00000437844.6	protein_coding	31319216,31373018,31387124,31461037,31495776,31502348,31510673,31514603,31520126,31523933,31526672	31319292,31373173,31387266,31461237,31495838,31502509,31510875,31514708,31521936,31524113,31529814	Gene ID= ENSG00000148516.21 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr10	31318752	31529813	31318752	31529813	+	transcript1282.chr10.nic@ZEB1	transcript1282.chr10.nic	protein_coding	31318752,31461037,31495776,31502348,31510673,31514603,31520126,31523933,31526672	31319133,31461237,31495838,31502509,31510875,31514708,31521936,31524113,31529813	Gene ID= ENSG00000148516.21 TPM= 4.67 Transcript Type= NA
chr10	31319172	31529813	31319172	31529813	+	ENST00000361642.9@ZEB1	ENST00000361642.9	protein_coding	31319172,31461037,31495776,31502348,31510673,31514603,31520126,31523933,31526672	31319292,31461237,31495838,31502509,31510875,31514708,31521936,31524113,31529813	Gene ID= ENSG00000148516.21 TPM= 8.17 Transcript Type= protein_coding
chr10	31319125	31529202	31319125	31529202	+	ENST00000320985.14@ZEB1	ENST00000320985.14	protein_coding	31319125,31461037,31495779,31502348,31510673,31514603,31520126,31523933,31526672	31319292,31461237,31495838,31502509,31510875,31514708,31521936,31524113,31529202	Gene ID= ENSG00000148516.21 TPM= 10.51 Transcript Type= protein_coding
chr10	31805404	31928876	31805404	31928876	-	ENST00000396144.8@ARHGAP12	ENST00000396144.8	protein_coding	31928683,31910525,31908172,31861395,31854066,31852517,31843461,31839637,31831739,31826304,31820387,31817788,31814259,31812707,31810649,31809230,31808994,31808649,31805404	31928876,31910563,31908926,31861658,31854206,31852597,31843586,31839711,31831800,31826385,31820488,31817886,31814361,31812823,31810747,31809307,31809128,31808751,31807832	Gene ID= ENSG00000165322.17 TPM= 4.67 Transcript Type= protein_coding
chr10	31805404	31928876	31805404	31928876	-	ENST00000375245.8@ARHGAP12	ENST00000375245.8	protein_coding	31928683,31910525,31908172,31861395,31852517,31843461,31839637,31839305,31831739,31826304,31820387,31817788,31814259,31812707,31810649,31809230,31808994,31808649,31805404	31928876,31910563,31908926,31861658,31852597,31843586,31839711,31839319,31831800,31826385,31820488,31817886,31814361,31812823,31810747,31809307,31809128,31808751,31807832	Gene ID= ENSG00000165322.17 TPM= 2.34 Transcript Type= protein_coding
chr10	31805437	31928814	31805437	31928814	-	ENST00000375250.9@ARHGAP12	ENST00000375250.9	protein_coding	31928683,31910525,31908172,31861395,31854066,31852517,31843461,31831739,31826304,31820387,31817788,31814259,31812707,31810649,31809230,31808994,31808649,31805437	31928814,31910563,31908926,31861658,31854206,31852597,31843586,31831800,31826385,31820488,31817886,31814361,31812823,31810747,31809307,31809128,31808751,31807832	Gene ID= ENSG00000165322.17 TPM= 1.17 Transcript Type= protein_coding
chr10	31806306	31928807	31806306	31928807	-	ENST00000344936.6@ARHGAP12	ENST00000344936.6	protein_coding	31928683,31910525,31908172,31861395,31854066,31852517,31843461,31839637,31839305,31831739,31826304,31820387,31817788,31814259,31812707,31810649,31809230,31808994,31808649,31806306	31928807,31910563,31908926,31861658,31854206,31852597,31843586,31839711,31839319,31831800,31826385,31820488,31817886,31814361,31812823,31810747,31809307,31809128,31808751,31807832	Gene ID= ENSG00000165322.17 TPM= 2.34 Transcript Type= protein_coding
chr10	32009010	32056431	32009010	32056431	-	ENST00000302418.4@KIF5B	ENST00000302418.4	protein_coding	32055848,32048464,32040384,32039327,32038778,32038163,32037520,32037254,32035890,32035522,32034690,32033845,32032706,32031073,32028428,32022848,32022140,32021226,32021022,32019858,32018502,32018316,32018052,32017143,32015509,32009010	32056431,32048551,32040457,32039431,32038826,32038218,32037607,32037378,32035994,32035667,32034838,32034038,32032774,32031279,32028571,32023036,32022257,32021287,32021131,32019959,32018562,32018387,32018156,32017359,32015659,32011516	Gene ID= ENSG00000170759.10 TPM= 93.41 Transcript Type= protein_coding
chr10	32284121	32347214	32284121	32347214	-	transcript1325.chr10.nic@EPC1	transcript1325.chr10.nic	protein_coding	32346763,32305772,32293592,32292988,32292496,32291163,32287098,32286926,32286694,32284121	32347214,32305931,32293737,32293194,32292644,32291322,32287274,32287015,32286842,32285050	Gene ID= ENSG00000120616.15 TPM= 4.67 Transcript Type= NA
chr10	32345112	32347218	32345112	32347218	-	ENST00000480402.1@EPC1	ENST00000480402.1	protein_coding	32346763,32345112	32347218,32345562	Gene ID= ENSG00000120616.15 TPM= 1.17 Transcript Type= processed_transcript
chr10	32345109	32347128	32345109	32347128	-	transcript1330.chr10.nnic@NA	transcript1330.chr10.nnic	NA	32345109	32347128	Gene ID= novel_gene_chr10_1331 TPM= 2.34 Transcript Type= NA
chr10	32900392	32958209	32900392	32958209	-	ENST00000302278.7@ITGB1	ENST00000302278.7	protein_coding	32958145,32935492,32932515,32929822,32928094,32925871,32923585,32922640,32922257,32920245,32919885,32911886,32911448,32910223,32908368,32900392	32958209,32935558,32932600,32930044,32928264,32926109,32923740,32922735,32922346,32920385,32920084,32912124,32911670,32910455,32908534,32901635	Gene ID= ENSG00000150093.18 TPM= 1121.44 Transcript Type= protein_coding
chr10	33177494	33334905	33177494	33334905	-	ENST00000395995.5@NRP1	ENST00000395995.5	protein_coding	33334310,33330708,33270675,33263646,33256316,33254028,33226134,33221719,33213386,33207572,33202891,33197650,33192281,33186217,33185628,33177494	33334905,33330882,33270856,33263873,33256471,33254194,33226289,33221863,33213717,33207716,33202995,33197709,33192418,33186488,33185724,33180365	Gene ID= ENSG00000099250.17 TPM= 154.71 Transcript Type= protein_coding
chr10	33197621	33334642	33197621	33334642	-	ENST00000374822.8@NRP1	ENST00000374822.8	protein_coding	33334310,33330708,33270675,33263646,33256316,33254028,33226134,33221719,33213386,33207572,33202891,33197621	33334642,33330882,33270856,33263873,33256471,33254194,33226289,33221863,33213717,33207716,33202995,33197709	Gene ID= ENSG00000099250.17 TPM= 11.09 Transcript Type= protein_coding
chr10	34111115	34815319	34111115	34815319	-	transcript1390.chr10.nic@PARD3	transcript1390.chr10.nic	protein_coding	34814876,34696318,34516979,34470085,34450317,34401826,34399330,34384129,34382540,34377967,34374874,34372498,34360071,34359147,34347965,34341627,34337275,34331117,34317107,34284135,34269657,34131463,34119613,34111115	34815319,34696419,34517159,34470263,34450448,34401917,34399413,34384254,34382922,34378106,34375002,34372536,34360259,34359317,34348115,34341816,34337426,34331344,34317338,34284245,34269899,34131583,34119740,34111562	Gene ID= ENSG00000148498.15 TPM= 7.32 Transcript Type= NA
chr10	34312260	34815283	34312260	34815283	-	transcript1401.chr10.nic@PARD3	transcript1401.chr10.nic	protein_coding	34814876,34696318,34516979,34470085,34450317,34401826,34399330,34384129,34382540,34377967,34374874,34360071,34359147,34347965,34341627,34337275,34336199,34331117,34317107,34312260	34815283,34696419,34517159,34470263,34450448,34401917,34399413,34384254,34382922,34378106,34375002,34360259,34359317,34348115,34341816,34337426,34336243,34331344,34317338,34312382	Gene ID= ENSG00000148498.15 TPM= 2.65 Transcript Type= NA
chr10	34312260	34815282	34312260	34815282	-	transcript1403.chr10.nic@PARD3	transcript1403.chr10.nic	protein_coding	34814876,34696318,34516979,34470085,34450317,34401826,34399330,34384129,34382540,34377967,34374874,34372498,34360071,34359147,34347965,34341627,34337275,34331117,34317107,34312260	34815282,34696419,34517159,34470263,34450448,34401917,34399413,34384254,34382922,34378106,34375002,34372536,34360259,34359317,34348115,34341816,34337426,34331344,34317338,34312382	Gene ID= ENSG00000148498.15 TPM= 4 Transcript Type= NA
chr10	34317197	34815278	34317197	34815278	-	transcript1404.chr10.nic@PARD3	transcript1404.chr10.nic	protein_coding	34814876,34696318,34516979,34470085,34450317,34401826,34399330,34384129,34382540,34377967,34374874,34372498,34360071,34359147,34347965,34341627,34337275,34336199,34331117,34317197	34815278,34696419,34517159,34470263,34450448,34401917,34399413,34384254,34382922,34378106,34375002,34372536,34360259,34359317,34348115,34341816,34337426,34336243,34331344,34317338	Gene ID= ENSG00000148498.15 TPM= 3.82 Transcript Type= NA
chr10	34312260	34815318	34312260	34815318	-	transcript1410.chr10.nic@PARD3	transcript1410.chr10.nic	protein_coding	34814876,34696318,34516979,34470085,34450317,34401826,34399330,34384129,34382540,34377967,34374874,34360071,34359147,34347965,34341627,34337275,34331117,34317107,34312260	34815318,34696419,34517159,34470263,34450448,34401917,34399413,34384254,34382922,34378106,34375002,34360259,34359317,34348115,34341816,34337426,34331344,34317338,34312382	Gene ID= ENSG00000148498.15 TPM= 4.99 Transcript Type= NA
chr10	34694471	34815276	34694471	34815276	-	transcript1414.chr10.nic@PARD3	transcript1414.chr10.nic	protein_coding	34814876,34694471	34815276,34696419	Gene ID= ENSG00000148498.15 TPM= 2.34 Transcript Type= NA
chr10	34312264	34815321	34312264	34815321	-	ENST00000374773.5@PARD3	ENST00000374773.5	protein_coding	34814876,34696318,34516979,34470085,34450317,34401826,34399330,34384129,34382540,34377967,34374874,34372498,34360071,34359147,34347965,34341627,34337365,34336199,34331117,34317107,34312264	34815321,34696419,34517159,34470263,34450448,34401917,34399413,34384254,34382922,34378106,34375002,34372536,34360259,34359317,34348115,34341816,34337426,34336243,34331344,34317338,34312382	Gene ID= ENSG00000148498.15 TPM= 2.84 Transcript Type= protein_coding
chr10	34312260	34815325	34312260	34815325	-	ENST00000340077.9@PARD3	ENST00000340077.9	protein_coding	34814876,34696318,34516979,34470085,34450317,34401826,34399330,34384129,34382540,34377967,34374874,34372498,34360071,34359147,34347965,34341627,34337275,34336199,34331117,34317107,34312260	34815325,34696419,34517159,34470263,34450448,34401917,34399413,34384254,34382922,34378106,34375002,34372536,34360259,34359317,34348115,34341816,34337426,34336243,34331344,34317338,34312382	Gene ID= ENSG00000148498.15 TPM= 9.84 Transcript Type= protein_coding
chr10	34312256	34815321	34312256	34815321	-	ENST00000374776.5@PARD3	ENST00000374776.5	protein_coding	34814876,34696318,34516979,34470085,34450317,34401826,34399330,34384129,34382540,34377967,34374874,34360071,34359147,34347965,34341627,34337365,34336199,34331117,34317107,34312256	34815321,34696419,34517159,34470263,34450448,34401917,34399413,34384254,34382922,34378106,34375002,34360259,34359317,34348115,34341816,34337426,34336243,34331344,34317338,34312382	Gene ID= ENSG00000148498.15 TPM= 2.65 Transcript Type= protein_coding
chr10	34973984	34975576	34973984	34975576	+	ENST00000635301.1@AL392046.2	ENST00000635301.1	lincRNA	34973984,34974194,34974658	34974088,34974282,34975576	Gene ID= ENSG00000283000.1 TPM= 1.17 Transcript Type= lincRNA
chr10	35008551	35090364	35008551	35090364	-	ENST00000374748.5@CUL2	ENST00000374748.5	protein_coding	35090179,35089896,35071199,35062960,35060874,35054434,35049683,35044772,35044566,35038920,35035172,35033166,35032435,35031491,35031300,35029488,35028810,35025132,35016192,35013699,35011848,35008551	35090364,35090001,35071339,35063062,35060968,35054539,35049765,35044868,35044676,35039082,35035296,35033273,35032494,35031619,35031386,35029640,35028887,35025198,35016394,35013800,35011964,35010442	Gene ID= ENSG00000108094.14 TPM= 5.25 Transcript Type= protein_coding
chr10	35008551	35090642	35008551	35090642	-	ENST00000374751.7@CUL2	ENST00000374751.7	protein_coding	35090430,35071199,35062960,35060874,35054434,35049683,35044772,35044566,35038920,35035172,35033166,35032435,35031491,35031300,35029488,35028810,35025132,35016192,35013699,35011848,35008551	35090642,35071339,35063062,35060968,35054539,35049765,35044868,35044676,35039082,35035296,35033273,35032494,35031619,35031386,35029640,35028887,35025198,35016394,35013800,35011964,35010442	Gene ID= ENSG00000108094.14 TPM= 4.09 Transcript Type= protein_coding
chr10	35009870	35090373	35009870	35090373	-	transcript1421.chr10.nic@CUL2	transcript1421.chr10.nic	protein_coding	35089896,35071199,35062960,35060874,35054434,35049683,35044772,35044566,35038920,35035172,35033166,35032435,35031491,35031300,35029488,35028810,35025132,35016192,35013699,35011848,35009870	35090373,35071339,35063062,35060968,35054539,35049765,35044868,35044676,35039082,35035296,35033273,35032494,35031619,35031386,35029640,35028887,35025198,35016394,35013800,35011964,35010442	Gene ID= ENSG00000108094.14 TPM= 9.34 Transcript Type= NA
chr10	35009862	35090289	35009862	35090289	-	transcript1425.chr10.nic@CUL2	transcript1425.chr10.nic	protein_coding	35090179,35071199,35062960,35060874,35054434,35049683,35044772,35044566,35038920,35035172,35033166,35032435,35031491,35031300,35029488,35028810,35025132,35016192,35013699,35009862	35090289,35071339,35063062,35060968,35054539,35049765,35044868,35044676,35039082,35035296,35033273,35032494,35031619,35031386,35029640,35028887,35025198,35016394,35013800,35010442	Gene ID= ENSG00000108094.14 TPM= 2.34 Transcript Type= NA
chr10	35126953	35212435	35126953	35212435	+	transcript1434.chr10.nic@CREM	transcript1434.chr10.nic	protein_coding	35126953,35148368,35178889,35179134,35206895,35211254	35127193,35148491,35178986,35179276,35207051,35212435	Gene ID= ENSG00000095794.19 TPM= 2.34 Transcript Type= NA
chr10	35195902	35212957	35195902	35212957	+	transcript1442.chr10.nic@CREM	transcript1442.chr10.nic	protein_coding	35195902,35201451,35206895,35211254	35196099,35201486,35207051,35212957	Gene ID= ENSG00000095794.19 TPM= 3.5 Transcript Type= NA
chr10	35126923	35179847	35126923	35179847	+	ENST00000374726.7@CREM	ENST00000374726.7	protein_coding	35126923,35148368,35178889,35179134	35127193,35148491,35178986,35179847	Gene ID= ENSG00000095794.19 TPM= 2.34 Transcript Type= protein_coding
chr10	35336874	35571924	35336874	35571924	+	ENST00000374704.7@CCNY	ENST00000374704.7	protein_coding	35336874,35483404,35501501,35516523,35525964,35529973,35530124,35553019,35566023,35569054	35337207,35483478,35501535,35516623,35525999,35530030,35530243,35553185,35566185,35571924	Gene ID= ENSG00000108100.17 TPM= 1.17 Transcript Type= protein_coding
chr10	35638609	35639458	35638609	35639458	-	transcript1484.chr10.nnic@NA	transcript1484.chr10.nnic	NA	35638609	35639458	Gene ID= novel_gene_chr10_1485 TPM= 3.5 Transcript Type= NA
chr10	37828765	37858084	37828765	37858084	-	ENST00000357328.8@ZNF248	ENST00000357328.8	protein_coding	37858005,37856435,37856296,37837985,37837617,37828765	37858084,37856532,37856337,37838111,37837712,37833116	Gene ID= ENSG00000198105.13 TPM= 2.34 Transcript Type= protein_coding
chr10	37828765	37857610	37828765	37857610	-	ENST00000395867.7@ZNF248	ENST00000395867.7	protein_coding	37857185,37856435,37856296,37837985,37837617,37828765	37857610,37856532,37856337,37838111,37837712,37833116	Gene ID= ENSG00000198105.13 TPM= 1.17 Transcript Type= protein_coding
chr10	37849407	37851792	37849407	37851792	+	transcript1500.chr10.nnic@NA	transcript1500.chr10.nnic	NA	37849407	37851792	Gene ID= novel_gene_chr10_1501 TPM= 23.35 Transcript Type= NA
chr10	37949865	37976567	37949865	37976567	-	transcript1504.chr10.nnic@ZNF25	transcript1504.chr10.nnic	protein_coding	37976506,37971708,37970294,37957420,37957020,37953695,37949865	37976567,37971807,37970357,37957546,37957115,37953758,37953195	Gene ID= ENSG00000175395.15 TPM= 2.34 Transcript Type= NA
chr10	37949865	37976647	37949865	37976647	-	transcript1506.chr10.nnic@ZNF25	transcript1506.chr10.nnic	protein_coding	37976506,37971915,37971708,37957420,37957020,37953695,37949865	37976647,37972021,37971807,37957546,37957115,37953758,37953195	Gene ID= ENSG00000175395.15 TPM= 3.5 Transcript Type= NA
chr10	37949572	37976633	37949572	37976633	-	ENST00000302609.7@ZNF25	ENST00000302609.7	protein_coding	37976506,37971708,37957420,37957020,37953695,37949572	37976633,37971807,37957546,37957115,37953758,37953195	Gene ID= ENSG00000175395.15 TPM= 1.17 Transcript Type= protein_coding
chr10	38010650	38060063	38010650	38060063	+	ENST00000374618.7@ZNF33A	ENST00000374618.7	protein_coding	38010650,38012298,38016871,38017291,38054375	38010783,38012350,38017020,38017386,38060063	Gene ID= ENSG00000189180.15 TPM= 14.01 Transcript Type= protein_coding
chr10	38010670	38060053	38010670	38060053	+	ENST00000458705.6@ZNF33A	ENST00000458705.6	protein_coding	38010670,38012298,38016871,38017291,38054378	38010783,38012350,38017015,38017386,38060053	Gene ID= ENSG00000189180.15 TPM= 12.84 Transcript Type= protein_coding
chr10	38012427	38014013	38012427	38014013	-	transcript1545.chr10.nnic@NA	transcript1545.chr10.nnic	NA	38012427	38014013	Gene ID= novel_gene_chr10_1546 TPM= 22.18 Transcript Type= NA
chr10	38094339	38122258	38094339	38122258	+	transcript1518.chr10.nic@ZNF37A	transcript1518.chr10.nic	protein_coding	38094339,38094931,38095538,38095744,38096574,38114755,38115195,38117390	38094490,38095224,38095629,38095804,38096632,38114881,38115290,38122258	Gene ID= ENSG00000075407.18 TPM= 4.67 Transcript Type= NA
chr10	38356382	38378505	38356382	38378505	+	transcript1550.chr10.nnic@HSD17B7P2	transcript1550.chr10.nnic	transcribed_unprocessed_pseudogene	38356382,38358312,38361280,38362240,38363522,38365434,38369953,38371075,38377985	38356489,38358515,38361322,38362338,38363610,38365629,38370009,38371173,38378505	Gene ID= ENSG00000099251.14 TPM= 2.34 Transcript Type= NA
chr10	38356382	38360138	38356382	38360138	+	transcript1556.chr10.nic@HSD17B7P2	transcript1556.chr10.nic	transcribed_unprocessed_pseudogene	38356382,38358312	38356489,38360138	Gene ID= ENSG00000099251.14 TPM= 9.34 Transcript Type= NA
chr10	38364604	38367822	38364604	38367822	-	transcript1559.chr10.nnic@NA	transcript1559.chr10.nnic	NA	38364604	38367822	Gene ID= novel_gene_chr10_1560 TPM= 2.34 Transcript Type= NA
chr10	38371304	38378505	38371304	38378505	+	transcript1557.chr10.nnic@NA	transcript1557.chr10.nnic	NA	38371304	38378505	Gene ID= novel_gene_chr10_1558 TPM= 2.34 Transcript Type= NA
chr10	42475543	42495336	42475543	42495336	+	ENST00000429940.6@LINC00839	ENST00000429940.6	lincRNA	42475543,42477261,42486979,42492080,42494015	42475880,42477442,42487126,42492342,42495336	Gene ID= ENSG00000185904.11 TPM= 1.17 Transcript Type= lincRNA
chr10	42519396	42552808	42519396	42552808	-	transcript1577.chr10.nic@ZNF37BP	transcript1577.chr10.nic	transcribed_processed_pseudogene	42551990,42551577,42550557,42523612,42523182,42519396	42552808,42551814,42550615,42523738,42523305,42521127	Gene ID= ENSG00000234420.7 TPM= 2.34 Transcript Type= NA
chr10	42514912	42517530	42514912	42517530	-	transcript1583.chr10.nnic@NA	transcript1583.chr10.nnic	NA	42514912	42517530	Gene ID= novel_gene_chr10_1584 TPM= 3.5 Transcript Type= NA
chr10	42517015	42519958	42517015	42519958	-	transcript1585.chr10.nnic@NA	transcript1585.chr10.nnic	NA	42517015	42519958	Gene ID= novel_gene_chr10_1586 TPM= 12.84 Transcript Type= NA
chr10	42581594	42638617	42581594	42638617	-	transcript1591.chr10.nic@ZNF33B	transcript1591.chr10.nic	protein_coding	42638474,42636920,42632295,42631929,42594595,42581594	42638617,42636972,42632439,42632024,42594699,42583123	Gene ID= ENSG00000196693.14 TPM= 3.5 Transcript Type= NA
chr10	42589111	42638617	42589111	42638617	-	transcript1592.chr10.nic@ZNF33B	transcript1592.chr10.nic	protein_coding	42638474,42636920,42632295,42631929,42614282,42589111	42638617,42636972,42632439,42632024,42614358,42594699	Gene ID= ENSG00000196693.14 TPM= 6.42 Transcript Type= NA
chr10	42589107	42638544	42589107	42638544	-	ENST00000359467.7@ZNF33B	ENST00000359467.7	protein_coding	42638474,42636920,42632295,42631929,42589107	42638544,42636972,42632439,42632024,42594699	Gene ID= ENSG00000196693.14 TPM= 2.92 Transcript Type= protein_coding
chr10	42751185	42755164	42751185	42755164	-	transcript1610.chr10.nnic@NA	transcript1610.chr10.nnic	NA	42751185	42755164	Gene ID= novel_gene_chr10_1611 TPM= 2.34 Transcript Type= NA
chr10	42782802	42831402	42782802	42831402	+	transcript1618.chr10.nnic@BMS1	transcript1618.chr10.nnic	protein_coding	42782802,42784362,42785482,42787168,42790323,42791627,42792493,42792957,42793852,42796474,42797422,42798468,42802137,42816599,42817318,42820236,42820508,42820934,42822062,42823118,42823609,42830261,42830866	42782998,42784570,42785672,42787247,42790511,42791769,42792614,42793144,42793991,42797231,42797523,42798625,42802218,42816672,42817494,42820424,42820688,42820992,42822184,42823265,42823784,42830422,42831402	Gene ID= ENSG00000165733.7 TPM= 8.17 Transcript Type= NA
chr10	42782801	42834937	42782801	42834937	+	ENST00000374518.5@BMS1	ENST00000374518.5	protein_coding	42782801,42784362,42785482,42787168,42790323,42791627,42792493,42792957,42793852,42796474,42797422,42798468,42802137,42816599,42817318,42820236,42820508,42820934,42822062,42823118,42823609,42830261,42830866	42782830,42784570,42785672,42787247,42790511,42791769,42792614,42793144,42793991,42797231,42797523,42798625,42802218,42816672,42817494,42820424,42820688,42820992,42822184,42823265,42823784,42830422,42834937	Gene ID= ENSG00000165733.7 TPM= 2.34 Transcript Type= protein_coding
chr10	43077079	43127504	43077079	43127504	+	ENST00000340058.5@RET	ENST00000340058.5	protein_coding	43077079,43100459,43102342,43104952,43106376,43109031,43111207,43112099,43112853,43113556,43114480,43116584,43118373,43119531,43120081,43121946,43123671,43124883,43126575	43077331,43100722,43102629,43105193,43106571,43109230,43111465,43112224,43112963,43113675,43114736,43116731,43118480,43119745,43120203,43122016,43123808,43124982,43127504	Gene ID= ENSG00000165731.18 TPM= 1.17 Transcript Type= protein_coding
chr10	43138445	43185308	43138445	43185308	+	transcript1625.chr10.nnic@CSGALNACT2	transcript1625.chr10.nnic	protein_coding	43138445,43154897,43158715,43159324,43160494,43162200,43167004,43175951,43183250	43138567,43155810,43158931,43159441,43160595,43164044,43167098,43176032,43185308	Gene ID= ENSG00000169826.7 TPM= 2.34 Transcript Type= NA
chr10	43138449	43185308	43138449	43185308	+	transcript1626.chr10.nnic@CSGALNACT2	transcript1626.chr10.nnic	protein_coding	43138449,43154897,43158715,43160494,43162200,43163866,43167004,43175951,43183250	43138567,43155810,43158931,43160595,43162318,43164044,43167098,43176032,43185308	Gene ID= ENSG00000169826.7 TPM= 3.5 Transcript Type= NA
chr10	43138450	43185308	43138450	43185308	+	transcript1629.chr10.nnic@CSGALNACT2	transcript1629.chr10.nnic	protein_coding	43138450,43154897,43158715,43160494,43162200,43167004,43175951,43183250	43138567,43155810,43158931,43160595,43164044,43167098,43176032,43185308	Gene ID= ENSG00000169826.7 TPM= 7.01 Transcript Type= NA
chr10	43138478	43185308	43138478	43185308	+	transcript1631.chr10.nnic@CSGALNACT2	transcript1631.chr10.nnic	protein_coding	43138478,43154897,43158715,43160494,43163866,43175951,43183250	43138567,43155810,43158931,43160595,43164044,43176032,43185308	Gene ID= ENSG00000169826.7 TPM= 7.01 Transcript Type= NA
chr10	43138447	43185308	43138447	43185308	+	transcript1634.chr10.nnic@CSGALNACT2	transcript1634.chr10.nnic	protein_coding	43138447,43154897,43160494,43163866,43167004,43175951,43183250	43138567,43155810,43160595,43164044,43167098,43176032,43185308	Gene ID= ENSG00000169826.7 TPM= 3.5 Transcript Type= NA
chr10	43138445	43185308	43138445	43185308	+	transcript1638.chr10.nnic@CSGALNACT2	transcript1638.chr10.nnic	protein_coding	43138445,43167004,43175951,43183250	43138567,43167098,43176032,43185308	Gene ID= ENSG00000169826.7 TPM= 3.5 Transcript Type= NA
chr10	43138486	43185308	43138486	43185308	+	ENST00000374466.3@CSGALNACT2	ENST00000374466.3	protein_coding	43138486,43154897,43158715,43160494,43163866,43167004,43175951,43183250	43138567,43155810,43158931,43160595,43164044,43167098,43176032,43185308	Gene ID= ENSG00000169826.7 TPM= 75.89 Transcript Type= protein_coding
chr10	43386022	43407778	43386022	43407778	-	transcript1645.chr10.nnic@HNRNPF	transcript1645.chr10.nnic	protein_coding	43407717,43397185,43396456,43394630,43386022	43407778,43397348,43396590,43394688,43387936	Gene ID= ENSG00000169813.16 TPM= 47.87 Transcript Type= NA
chr10	43385854	43409210	43385854	43409210	-	transcript1649.chr10.nnic@HNRNPF	transcript1649.chr10.nnic	protein_coding	43409131,43396456,43394630,43385854	43409210,43396590,43394688,43387936	Gene ID= ENSG00000169813.16 TPM= 45.54 Transcript Type= NA
chr10	43385617	43407819	43385617	43407819	-	ENST00000357065.8@HNRNPF	ENST00000357065.8	protein_coding	43407717,43396456,43394630,43385617	43407819,43396590,43394688,43387936	Gene ID= ENSG00000169813.16 TPM= 2.34 Transcript Type= protein_coding
chr10	43386022	43409166	43386022	43409166	-	ENST00000337970.7@HNRNPF	ENST00000337970.7	protein_coding	43409090,43396456,43394630,43386022	43409166,43396590,43394688,43387936	Gene ID= ENSG00000169813.16 TPM= 92.24 Transcript Type= protein_coding
chr10	43420738	43422100	43420738	43422100	+	ENST00000442526.2@AL450326.1	ENST00000442526.2	lincRNA	43420738,43421670	43421066,43422100	Gene ID= ENSG00000230555.2 TPM= 1.17 Transcript Type= lincRNA
chr10	43556347	43574618	43556347	43574618	-	ENST00000426961.1@ZNF239	ENST00000426961.1	protein_coding	43574540,43567899,43556347	43574618,43568021,43558171	Gene ID= ENSG00000196793.13 TPM= 1.17 Transcript Type= protein_coding
chr10	43606407	43617903	43606407	43617903	+	ENST00000361807.7@ZNF485	ENST00000361807.7	protein_coding	43606407,43606997,43608614,43609255,43616291	43606546,43607074,43608740,43609350,43617903	Gene ID= ENSG00000198298.12 TPM= 4.67 Transcript Type= protein_coding
chr10	43643860	43648704	43643860	43648704	-	ENST00000395797.1@ZNF32	ENST00000395797.1	protein_coding	43648585,43646064,43643860	43648704,43646202,43644801	Gene ID= ENSG00000169740.13 TPM= 2.92 Transcript Type= protein_coding
chr10	43643859	43648856	43643859	43648856	-	ENST00000374433.6@ZNF32	ENST00000374433.6	protein_coding	43648802,43646064,43643859	43648856,43646202,43644801	Gene ID= ENSG00000169740.13 TPM= 33.28 Transcript Type= protein_coding
chr10	43643862	43648886	43643862	43648886	-	transcript1668.chr10.nnic@NA	transcript1668.chr10.nnic	NA	43643862	43648886	Gene ID= novel_gene_chr10_1669 TPM= 3.5 Transcript Type= NA
chr10	44370165	44385092	44370165	44385092	-	ENST00000374429.6@CXCL12	ENST00000374429.6	protein_coding	44384945,44380763,44378637,44370165	44385092,44380880,44378723,44373343	Gene ID= ENSG00000107562.16 TPM= 10.51 Transcript Type= protein_coding
chr10	44377133	44385092	44377133	44385092	-	ENST00000343575.10@CXCL12	ENST00000343575.10	protein_coding	44384945,44380763,44377133	44385092,44380880,44378723	Gene ID= ENSG00000107562.16 TPM= 23.35 Transcript Type= protein_coding
chr10	44881275	44959708	44881275	44959708	-	transcript1703.chr10.nnic@TMEM72-AS1	transcript1703.chr10.nnic	antisense_RNA	44959592,44923081,44881275	44959708,44923226,44885300	Gene ID= ENSG00000224812.2 TPM= 2.34 Transcript Type= NA
chr10	44959766	44994707	44959766	44994707	+	transcript1679.chr10.nic@RASSF4	transcript1679.chr10.nic	protein_coding	44959766,44970165,44971773,44982521,44983941,44984813,44989274,44989670,44990948,44991905,44993269	44959866,44970264,44971848,44982663,44984113,44984970,44989375,44989721,44991069,44992002,44994707	Gene ID= ENSG00000107551.20 TPM= 7.01 Transcript Type= NA
chr10	44959759	44994710	44959759	44994710	+	transcript1684.chr10.nnic@RASSF4	transcript1684.chr10.nnic	protein_coding	44959759,44970165,44971773,44982521,44983991,44984813,44989274,44989670,44990948,44991905	44959866,44970264,44971848,44982663,44984113,44984970,44989375,44989721,44991069,44994710	Gene ID= ENSG00000107551.20 TPM= 3.5 Transcript Type= NA
chr10	44959760	44994707	44959760	44994707	+	transcript1688.chr10.nic@RASSF4	transcript1688.chr10.nic	protein_coding	44959760,44970165,44982521,44983941,44984813,44989274,44989670,44990948,44991905,44993269	44959866,44971848,44982663,44984113,44984970,44989375,44989721,44991069,44992002,44994707	Gene ID= ENSG00000107551.20 TPM= 3.5 Transcript Type= NA
chr10	44959366	44994707	44959366	44994707	+	transcript1689.chr10.nnic@RASSF4	transcript1689.chr10.nnic	protein_coding	44959366,44970165,44982521,44983991,44984813,44989274,44989670,44990948,44991905,44993269	44959866,44971848,44982663,44984113,44984970,44989375,44989721,44991069,44992002,44994707	Gene ID= ENSG00000107551.20 TPM= 2.34 Transcript Type= NA
chr10	44959765	44994721	44959765	44994721	+	transcript1691.chr10.nnic@RASSF4	transcript1691.chr10.nnic	protein_coding	44959765,44970165,44982521,44984022,44984813,44989274,44989670,44990948,44991905,44993939	44959866,44971848,44982663,44984113,44984970,44989375,44989721,44991069,44992002,44994721	Gene ID= ENSG00000107551.20 TPM= 2.34 Transcript Type= NA
chr10	44959773	44991343	44959773	44991343	+	transcript1693.chr10.nic@RASSF4	transcript1693.chr10.nic	protein_coding	44959773,44970165,44971773,44982521,44984022,44984813,44989274,44989670,44990948	44959866,44970264,44971848,44982663,44984113,44984970,44989375,44989721,44991343	Gene ID= ENSG00000107551.20 TPM= 3.5 Transcript Type= NA
chr10	44959795	44994710	44959795	44994710	+	transcript1698.chr10.nic@RASSF4	transcript1698.chr10.nic	protein_coding	44959795,44970165,44982521,44984022,44984813,44989274,44989670,44990948,44991905	44959866,44971848,44982663,44984113,44984970,44989375,44989721,44991069,44994710	Gene ID= ENSG00000107551.20 TPM= 4.67 Transcript Type= NA
chr10	44959407	44994707	44959407	44994707	+	ENST00000489171.5@RASSF4	ENST00000489171.5	protein_coding	44959407,44970165,44982521,44984022,44984813,44989274,44989670,44990948,44991905,44993269	44959866,44971848,44982663,44984113,44984970,44989375,44989721,44991069,44992002,44994707	Gene ID= ENSG00000107551.20 TPM= 28.02 Transcript Type= retained_intron
chr10	44976265	44978809	44976265	44978809	-	transcript1705.chr10.nnic@NA	transcript1705.chr10.nnic	NA	44976265	44978809	Gene ID= novel_gene_chr10_1706 TPM= 65.39 Transcript Type= NA
chr10	44997698	45000888	44997698	45000888	-	ENST00000625168.1@C10orf25	ENST00000625168.1	antisense_RNA	45000530,44997698	45000888,45000416	Gene ID= ENSG00000165511.6 TPM= 4.67 Transcript Type= antisense_RNA
chr10	45000475	45005326	45000475	45005326	+	ENST00000298299.3@ZNF22	ENST00000298299.3	protein_coding	45000475,45003280	45000978,45005326	Gene ID= ENSG00000165512.4 TPM= 115.59 Transcript Type= protein_coding
chr10	45001006	45005324	45001006	45005324	+	transcript1708.chr10.nnic@ZNF22	transcript1708.chr10.nnic	protein_coding	45001006,45003280	45001283,45005324	Gene ID= ENSG00000165512.4 TPM= 5.84 Transcript Type= NA
chr10	45374161	45446115	45374161	45446115	+	transcript1717.chr10.nic@ALOX5	transcript1717.chr10.nic	protein_coding	45374161,45382483,45395855,45412191,45424041,45424960,45428618,45440430,45441344,45443038,45443728,45444116,45445508	45374429,45382681,45395936,45412313,45424147,45425132,45428764,45440633,45441430,45443537,45443828,45444286,45446115	Gene ID= ENSG00000012779.10 TPM= 38.64 Transcript Type= NA
chr10	45374161	45446117	45374161	45446117	+	transcript1726.chr10.nic@ALOX5	transcript1726.chr10.nic	protein_coding	45374161,45382483,45395855,45412191,45424041,45424960,45428618,45440430,45441344,45443038,45443728	45374429,45382681,45395936,45412313,45424147,45425132,45428764,45440633,45441430,45443537,45446117	Gene ID= ENSG00000012779.10 TPM= 11.91 Transcript Type= NA
chr10	45441478	45446115	45441478	45446115	+	transcript1733.chr10.nic@ALOX5	transcript1733.chr10.nic	protein_coding	45441478,45443728,45444116,45445508	45443537,45443828,45444286,45446115	Gene ID= ENSG00000012779.10 TPM= 18.55 Transcript Type= NA
chr10	45374227	45446115	45374227	45446115	+	ENST00000374391.6@ALOX5	ENST00000374391.6	protein_coding	45374227,45382483,45395855,45412191,45424041,45424960,45428618,45440430,45441344,45443038,45443416,45443728,45444116,45445508	45374429,45382681,45395936,45412313,45424147,45425132,45428764,45440633,45441430,45443216,45443537,45443828,45444286,45446115	Gene ID= ENSG00000012779.10 TPM= 257.36 Transcript Type= protein_coding
chr10	45374176	45446119	45374176	45446119	+	ENST00000542434.5@ALOX5	ENST00000542434.5	protein_coding	45374176,45382483,45395855,45412191,45424041,45424960,45428618,45440430,45441344,45443038,45443416,45443728,45445508	45374429,45382681,45395936,45412313,45424147,45425132,45428764,45440633,45441430,45443216,45443537,45443828,45446119	Gene ID= ENSG00000012779.10 TPM= 26.18 Transcript Type= protein_coding
chr10	45454585	45594900	45454585	45594900	-	transcript1739.chr10.nic@MARCH8	transcript1739.chr10.nic	protein_coding	45594235,45553112,45533110,45489367,45464239,45461231,45459120,45454585	45594900,45553204,45533289,45489417,45464327,45461411,45459267,45458543	Gene ID= ENSG00000165406.15 TPM= 16.35 Transcript Type= NA
chr10	45454593	45594906	45454593	45594906	-	ENST00000319836.7@MARCH8	ENST00000319836.7	protein_coding	45594235,45533110,45489367,45464239,45461231,45459120,45454593	45594906,45533289,45489417,45464327,45461411,45459267,45458543	Gene ID= ENSG00000165406.15 TPM= 15.18 Transcript Type= protein_coding
chr10	45727208	45792961	45727208	45792961	+	transcript1772.chr10.nnic@WASHC2C	transcript1772.chr10.nnic	protein_coding	45727208,45727417,45728906,45737983,45740073,45743390,45744821,45746600,45750096,45750751,45751482,45752588,45753180,45754486,45754936,45757012,45759315,45763388,45765679,45769449,45773256,45777273,45778953,45784565,45784821,45785509,45786612,45787035,45788871,45790356,45792261	45727320,45727539,45729026,45738045,45740246,45743483,45744882,45746647,45750206,45750838,45751553,45752706,45753237,45754545,45755115,45757139,45759401,45763489,45765810,45769618,45773358,45777425,45779135,45784693,45784901,45785631,45786674,45787247,45789491,45790533,45792961	Gene ID= ENSG00000172661.17 TPM= 5.93 Transcript Type= NA
chr10	45727208	45792961	45727208	45792961	+	transcript1781.chr10.nnic@WASHC2C	transcript1781.chr10.nnic	protein_coding	45727208,45727417,45728862,45737983,45740073,45743390,45744821,45746600,45750096,45750751,45751482,45752588,45753180,45754486,45754936,45757012,45763388,45765679,45769449,45773256,45777273,45778953,45784565,45784821,45785509,45786612,45787035,45788871,45790356,45792261	45727320,45727539,45729026,45738045,45740246,45743483,45744882,45746647,45750206,45750838,45751553,45752706,45753237,45754545,45755115,45757139,45763489,45765810,45769618,45773358,45777425,45779135,45784693,45784901,45785631,45786674,45787247,45789491,45790533,45792961	Gene ID= ENSG00000172661.17 TPM= 12.79 Transcript Type= NA
chr10	45727208	45792961	45727208	45792961	+	transcript1783.chr10.nic@WASHC2C	transcript1783.chr10.nic	protein_coding	45727208,45727417,45728862,45737983,45740073,45743390,45744821,45746600,45750096,45750751,45752588,45753180,45754486,45754936,45757012,45759315,45763388,45765679,45769449,45773256,45777273,45778953,45784565,45784821,45785509,45786612,45787035,45788871,45790356,45792261	45727320,45727539,45729026,45738045,45740246,45743483,45744882,45746647,45750206,45750838,45752706,45753237,45754545,45755115,45757139,45759401,45763489,45765810,45769618,45773358,45777425,45779135,45784693,45784901,45785631,45786674,45787247,45789491,45790533,45792961	Gene ID= ENSG00000172661.17 TPM= 8.41 Transcript Type= NA
chr10	45727208	45792961	45727208	45792961	+	transcript1785.chr10.nic@WASHC2C	transcript1785.chr10.nic	protein_coding	45727208,45727417,45728862,45737983,45740073,45743390,45744821,45746600,45750096,45750751,45752588,45753180,45754486,45754936,45757012,45759315,45763388,45765679,45769449,45773256,45777273,45778953,45784565,45784821,45785509,45786612,45787035,45788871,45790356,45792261	45727320,45727539,45729026,45738045,45740246,45743483,45744882,45746647,45750206,45751553,45752706,45753237,45754545,45755115,45757139,45759401,45763489,45765810,45769618,45773358,45777425,45779135,45784693,45784901,45785631,45786674,45787247,45789491,45790533,45792961	Gene ID= ENSG00000172661.17 TPM= 4.9 Transcript Type= NA
chr10	45727200	45792961	45727200	45792961	+	ENST00000540872.5@WASHC2C	ENST00000540872.5	protein_coding	45727200,45727417,45728862,45737983,45740073,45743390,45744821,45746600,45750096,45750751,45751482,45752588,45753180,45754486,45754936,45757012,45759315,45763388,45765679,45769449,45773256,45777273,45778953,45784565,45784821,45787035,45788871,45790356,45792261	45727320,45727539,45729026,45738045,45740246,45743483,45744882,45746647,45750206,45750838,45751553,45752706,45753237,45754545,45755115,45757139,45759401,45763489,45765810,45769618,45773358,45777425,45779135,45784693,45784901,45787247,45789491,45790533,45792961	Gene ID= ENSG00000172661.17 TPM= 3.56 Transcript Type= protein_coding
chr10	45727219	45792961	45727219	45792961	+	ENST00000374362.6@WASHC2C	ENST00000374362.6	protein_coding	45727219,45727417,45728862,45737983,45740073,45743390,45744821,45746600,45750096,45750751,45751482,45752588,45753180,45754486,45754936,45757012,45759315,45763388,45765679,45769449,45773256,45777273,45778953,45784565,45784821,45785509,45787035,45788871,45790356,45792261	45727320,45727539,45729026,45738045,45740246,45743483,45744882,45746647,45750206,45750838,45751553,45752706,45753237,45754545,45755115,45757139,45759401,45763489,45765810,45769618,45773358,45777425,45779135,45784693,45784901,45785631,45787247,45789491,45790533,45792961	Gene ID= ENSG00000172661.17 TPM= 3.56 Transcript Type= protein_coding
chr10	45910863	45914699	45910863	45914699	+	transcript1839.chr10.nnic@NA	transcript1839.chr10.nnic	NA	45910863	45914699	Gene ID= novel_gene_chr10_1840 TPM= 5.84 Transcript Type= NA
chr10	45972449	46003734	45972449	46003734	+	ENST00000580018.3@TIMM23	ENST00000580018.3	protein_coding	45972449,45975454,45982523,45982846,45985383,45988737,46003203	45972730,45975512,45982616,45982930,45985441,45988847,46003734	Gene ID= ENSG00000265354.3 TPM= 44.37 Transcript Type= protein_coding
chr10	45992564	45994164	45992564	45994164	-	transcript1841.chr10.nnic@NA	transcript1841.chr10.nnic	NA	45992564	45994164	Gene ID= novel_gene_chr10_1842 TPM= 2.34 Transcript Type= NA
chr10	46005091	46030714	46005091	46030714	-	ENST00000581486.5@NCOA4	ENST00000581486.5	protein_coding	46030526,46016540,46015126,46014854,46014444,46013550,46012883,46010223,46009411,46005091	46030714,46016694,46015266,46014942,46014552,46013639,46013026,46011206,46009551,46006597	Gene ID= ENSG00000266412.5 TPM= 349.73 Transcript Type= protein_coding
chr10	46005088	46023455	46005088	46023455	-	ENST00000585132.5@NCOA4	ENST00000585132.5	protein_coding	46023330,46016540,46015126,46014854,46014444,46013550,46012883,46010223,46009411,46005088	46023455,46016694,46015266,46014942,46014552,46013639,46013026,46011206,46009551,46006597	Gene ID= ENSG00000266412.5 TPM= 141.9 Transcript Type= protein_coding
chr10	46375587	46391784	46375587	46391784	+	transcript1849.chr10.nnic@ANXA8L1	transcript1849.chr10.nnic	protein_coding	46375587,46379885,46381146,46382579,46383456,46383675,46384774,46385380,46385712,46387586,46388393,46390871	46375872,46379975,46381240,46382692,46383546,46384285,46384833,46385473,46385807,46387644,46388515,46391784	Gene ID= ENSG00000264230.7 TPM= 6.81 Transcript Type= NA
chr10	46375648	46391784	46375648	46391784	+	transcript1853.chr10.nic@ANXA8L1	transcript1853.chr10.nic	protein_coding	46375648,46379885,46381146,46382579,46383456,46384206,46384774,46385380,46385712,46388393,46390871	46375872,46379975,46381240,46382692,46383546,46384285,46384833,46385473,46387644,46388515,46391784	Gene ID= ENSG00000264230.7 TPM= 5.64 Transcript Type= NA
chr10	46375747	46391784	46375747	46391784	+	transcript1858.chr10.nnic@ANXA8L1	transcript1858.chr10.nnic	protein_coding	46375747,46379885,46381146,46383675,46384774,46385380,46385712,46387586,46388393,46390871	46375872,46379975,46383546,46384285,46384833,46385473,46385807,46387644,46388515,46391784	Gene ID= ENSG00000264230.7 TPM= 3.89 Transcript Type= NA
chr10	46398901	46405100	46398901	46405100	-	transcript1860.chr10.nnic@NA	transcript1860.chr10.nnic	NA	46398901	46405100	Gene ID= novel_gene_chr10_1861 TPM= 2.34 Transcript Type= NA
chr10	46541736	46546184	46541736	46546184	-	transcript1896.chr10.nnic@NA	transcript1896.chr10.nnic	NA	46541736	46546184	Gene ID= novel_gene_chr10_1897 TPM= 8.17 Transcript Type= NA
chr10	46549044	46556662	46549044	46556662	-	transcript1869.chr10.nnic@GPRIN2	transcript1869.chr10.nnic	protein_coding	46556498,46555375,46554585,46551416,46549044	46556662,46555529,46554695,46551537,46550742	Gene ID= ENSG00000204175.5 TPM= 8.64 Transcript Type= NA
chr10	46549044	46556651	46549044	46556651	-	transcript1870.chr10.nnic@GPRIN2	transcript1870.chr10.nnic	protein_coding	46556498,46555375,46554585,46551416,46549044	46556651,46555529,46554695,46551575,46550742	Gene ID= ENSG00000204175.5 TPM= 2.8 Transcript Type= NA
chr10	46543995	46556618	46543995	46556618	-	transcript1873.chr10.nnic@GPRIN2	transcript1873.chr10.nnic	protein_coding	46556498,46555375,46554585,46543995	46556618,46555529,46554695,46550742	Gene ID= ENSG00000204175.5 TPM= 13.43 Transcript Type= NA
chr10	46549044	46556688	46549044	46556688	-	transcript1879.chr10.nnic@GPRIN2	transcript1879.chr10.nnic	protein_coding	46556498,46554585,46551416,46549044	46556688,46554695,46551537,46550742	Gene ID= ENSG00000204175.5 TPM= 2.8 Transcript Type= NA
chr10	46549044	46556805	46549044	46556805	-	transcript1881.chr10.nnic@GPRIN2	transcript1881.chr10.nnic	protein_coding	46556054,46555375,46554585,46549044	46556805,46555529,46554695,46550742	Gene ID= ENSG00000204175.5 TPM= 2.8 Transcript Type= NA
chr10	46543995	46556621	46543995	46556621	-	transcript1885.chr10.nnic@GPRIN2	transcript1885.chr10.nnic	protein_coding	46556498,46554585,46543995	46556621,46554695,46550742	Gene ID= ENSG00000204175.5 TPM= 18.1 Transcript Type= NA
chr10	46549044	46557131	46549044	46557131	-	transcript1893.chr10.nnic@GPRIN2	transcript1893.chr10.nnic	protein_coding	46557057,46554585,46549044	46557131,46554695,46550742	Gene ID= ENSG00000204175.5 TPM= 2.8 Transcript Type= NA
chr10	46549044	46555530	46549044	46555530	-	ENST00000374317.1@GPRIN2	ENST00000374317.1	protein_coding	46555375,46554585,46549044	46555530,46554695,46550742	Gene ID= ENSG00000204175.5 TPM= 8.64 Transcript Type= protein_coding
chr10	46579014	46597103	46579014	46597103	+	transcript1903.chr10.nnic@SYT15	transcript1903.chr10.nnic	protein_coding	46579014,46580164,46580894,46581896,46583732,46584495,46585598,46589599,46595152	46579175,46580368,46581036,46582191,46583902,46584615,46585777,46589673,46597103	Gene ID= ENSG00000204176.13 TPM= 5.06 Transcript Type= NA
chr10	46579045	46590175	46579045	46590175	+	transcript1910.chr10.nic@SYT15	transcript1910.chr10.nic	protein_coding	46579045,46580164,46580894,46581896,46583732,46584495,46585598,46589599	46579175,46580368,46581036,46582191,46583902,46584615,46585777,46590175	Gene ID= ENSG00000204176.13 TPM= 2.72 Transcript Type= NA
chr10	46579014	46586263	46579014	46586263	+	transcript1917.chr10.nic@SYT15	transcript1917.chr10.nic	protein_coding	46579014,46580164,46580894,46581896,46583732,46584495	46579175,46580368,46581036,46582191,46583902,46586263	Gene ID= ENSG00000204176.13 TPM= 3.12 Transcript Type= NA
chr10	46579132	46586263	46579132	46586263	+	transcript1919.chr10.nic@SYT15	transcript1919.chr10.nic	protein_coding	46579132,46580164,46580894,46583732,46584495	46579175,46580368,46582191,46583902,46586263	Gene ID= ENSG00000204176.13 TPM= 3.3 Transcript Type= NA
chr10	46579045	46586263	46579045	46586263	+	transcript1923.chr10.nic@SYT15	transcript1923.chr10.nic	protein_coding	46579045,46580894,46583732,46584495	46580368,46582191,46583902,46586263	Gene ID= ENSG00000204176.13 TPM= 3.3 Transcript Type= NA
chr10	46786851	46791748	46786851	46791748	+	transcript1926.chr10.nic@BMS1P1	transcript1926.chr10.nic	transcribed_unprocessed_pseudogene	46786851,46788397,46789497,46790962	46786900,46788600,46789686,46791748	Gene ID= ENSG00000204177.10 TPM= 3.5 Transcript Type= NA
chr10	47300386	47313547	47300386	47313547	+	ENST00000580279.1@GDF10	ENST00000580279.1	protein_coding	47300386,47309796,47312601	47300970,47310721,47313547	Gene ID= ENSG00000266524.2 TPM= 23.35 Transcript Type= protein_coding
chr10	47365496	47384273	47365496	47384273	-	ENST00000585316.2@ZNF488	ENST00000585316.2	protein_coding	47384220,47365496	47384273,47368937	Gene ID= ENSG00000265763.3 TPM= 1.17 Transcript Type= protein_coding
chr10	47467993	47484055	47467993	47484055	-	ENST00000585281.5@ANXA8	ENST00000585281.5	protein_coding	47483913,47479798,47478533,47477081,47476232,47475493,47474945,47474305,47473970,47472133,47471262,47467993	47484055,47479888,47478627,47477194,47476322,47475572,47475004,47474398,47474065,47472191,47471384,47468906	Gene ID= ENSG00000265190.6 TPM= 42.03 Transcript Type= protein_coding
chr10	47548601	47553534	47548601	47553534	-	transcript1939.chr10.nic@AL591684.2	transcript1939.chr10.nic	processed_transcript	47553479,47551744,47550658,47548601	47553534,47551952,47550847,47549384	Gene ID= ENSG00000254929.6 TPM= 5.84 Transcript Type= NA
chr10	47745306	47762921	47745306	47762921	-	transcript1946.chr10.nnic@FO681492.1	transcript1946.chr10.nnic	protein_coding	47762634,47761441,47760787,47759632,47757921,47757208,47756043,47752148,47745306	47762921,47761645,47760929,47759927,47758091,47757328,47756222,47752222,47746671	Gene ID= ENSG00000277758.4 TPM= 3.5 Transcript Type= NA
chr10	47747648	47762794	47747648	47762794	-	transcript1947.chr10.nnic@FO681492.1	transcript1947.chr10.nnic	protein_coding	47762634,47761441,47760787,47759632,47757921,47757208,47756043,47752148,47747648	47762794,47761645,47760929,47759927,47758091,47757328,47756222,47752222,47747832	Gene ID= ENSG00000277758.4 TPM= 3.89 Transcript Type= NA
chr10	47748189	47762770	47748189	47762770	-	transcript1948.chr10.nnic@FO681492.1	transcript1948.chr10.nnic	protein_coding	47762634,47761441,47760787,47759632,47757921,47757208,47756043,47752148,47748189	47762770,47761645,47760929,47759927,47758091,47757328,47756222,47752222,47748534	Gene ID= ENSG00000277758.4 TPM= 2.72 Transcript Type= NA
chr10	47749843	47762863	47749843	47762863	-	transcript1950.chr10.nnic@FO681492.1	transcript1950.chr10.nnic	protein_coding	47762634,47761441,47760787,47759632,47757921,47757208,47756043,47752148,47749843	47762863,47761645,47760929,47759927,47758091,47757328,47756222,47752222,47751418	Gene ID= ENSG00000277758.4 TPM= 3.5 Transcript Type= NA
chr10	47755556	47762795	47755556	47762795	-	transcript1964.chr10.nic@FO681492.1	transcript1964.chr10.nic	protein_coding	47762634,47761441,47760787,47759632,47757921,47757208,47755556	47762795,47761645,47760929,47759927,47758091,47757328,47756222	Gene ID= ENSG00000277758.4 TPM= 3.89 Transcript Type= NA
chr10	47749853	47762785	47749853	47762785	-	transcript1968.chr10.nic@FO681492.1	transcript1968.chr10.nic	protein_coding	47762634,47759632,47757921,47757208,47756043,47749853	47762785,47761645,47758091,47757328,47756222,47754314	Gene ID= ENSG00000277758.4 TPM= 11.68 Transcript Type= NA
chr10	47755556	47763444	47755556	47763444	-	transcript1971.chr10.nic@FO681492.1	transcript1971.chr10.nic	protein_coding	47759632,47757921,47755556	47763444,47758091,47757328	Gene ID= ENSG00000277758.4 TPM= 4.67 Transcript Type= NA
chr10	47957623	47991873	47957623	47991873	-	transcript1978.chr10.nnic@AC245041.2	transcript1978.chr10.nnic	lincRNA	47991680,47985856,47957623	47991873,47985987,47957901	Gene ID= ENSG00000276850.4 TPM= 3.5 Transcript Type= NA
chr10	47985519	47991850	47985519	47991850	-	ENST00000610809.1@AC245041.2	ENST00000610809.1	lincRNA	47991680,47985519	47991850,47987309	Gene ID= ENSG00000276850.4 TPM= 25.69 Transcript Type= lincRNA
chr10	47928752	47930953	47928752	47930953	-	transcript1984.chr10.nnic@NA	transcript1984.chr10.nnic	NA	47928752	47930953	Gene ID= novel_gene_chr10_1985 TPM= 2.34 Transcript Type= NA
chr10	47967904	47972500	47967904	47972500	-	transcript1982.chr10.nnic@NA	transcript1982.chr10.nnic	NA	47967904	47972500	Gene ID= novel_gene_chr10_1983 TPM= 17.51 Transcript Type= NA
chr10	47985514	47989707	47985514	47989707	-	transcript1986.chr10.nnic@NA	transcript1986.chr10.nnic	NA	47985514	47989707	Gene ID= novel_gene_chr10_1987 TPM= 3.5 Transcript Type= NA
chr10	48446037	48524397	48446037	48524397	-	transcript1992.chr10.nic@ARHGAP22	transcript1992.chr10.nic	protein_coding	48524053,48479636,48459684,48455002,48454088,48453304,48450261,48446037	48524397,48479764,48459891,48455134,48454161,48453425,48451140,48446619	Gene ID= ENSG00000128805.14 TPM= 2.34 Transcript Type= NA
chr10	48446037	48524406	48446037	48524406	-	transcript1993.chr10.nnic@ARHGAP22	transcript1993.chr10.nnic	protein_coding	48524053,48459684,48455002,48454088,48453304,48450261,48446037	48524406,48459891,48455134,48454161,48453425,48451140,48446619	Gene ID= ENSG00000128805.14 TPM= 2.34 Transcript Type= NA
chr10	48446034	48605093	48446034	48605093	-	ENST00000249601.8@ARHGAP22	ENST00000249601.8	protein_coding	48604763,48582953,48555463,48479636,48459684,48455002,48454088,48453304,48450261,48446034	48605093,48583152,48555550,48479764,48459891,48455134,48454161,48453425,48451140,48446619	Gene ID= ENSG00000128805.14 TPM= 2.34 Transcript Type= protein_coding
chr10	48684876	48982956	48684876	48982956	+	ENST00000325239.11@WDFY4	ENST00000325239.11	protein_coding	48684876,48709716,48720011,48721261,48723433,48725881,48727470,48729432,48731110,48733931,48735880,48742968,48760347,48774458,48775712,48776750,48777419,48778611,48779941,48786639,48788530,48789874,48790727,48796298,48803286,48805260,48806004,48807859,48810530,48811539,48813957,48817245,48820234,48821062,48822380,48826671,48828778,48830700,48832573,48867265,48873491,48875089,48877033,48890579,48897454,48900221,48901801,48941806,48943330,48946040,48946860,48957129,48959722,48963842,48966526,48969064,48970131,48974862,48976797,48978309,48981367,48982509	48685001,48709966,48720125,48721367,48723567,48726070,48727659,48729589,48731562,48734035,48736070,48743548,48760440,48774672,48775806,48776984,48777495,48778832,48780119,48786870,48788675,48789985,48790917,48796450,48803359,48805421,48806095,48807958,48810735,48811708,48814082,48817409,48820437,48821176,48822537,48826909,48828896,48830885,48832709,48867342,48873697,48875140,48877199,48890727,48897574,48900306,48901863,48941848,48943449,48946157,48946969,48957282,48959813,48964054,48966673,48969248,48970289,48975041,48976979,48978393,48981478,48982956	Gene ID= ENSG00000128815.19 TPM= 21.02 Transcript Type= protein_coding
chr10	49014245	49115509	49014245	49115509	-	ENST00000332853.8@VSTM4	ENST00000332853.8	protein_coding	49115431,49107594,49085955,49077219,49064703,49048478,49046983,49014245	49115509,49107995,49086023,49077326,49064736,49048584,49047044,49019775	Gene ID= ENSG00000165633.12 TPM= 8.17 Transcript Type= protein_coding
chr10	49154728	49188402	49154728	49188402	-	transcript2013.chr10.nic@C10orf128	transcript2013.chr10.nic	protein_coding	49188294,49167909,49165766,49161599,49154728	49188402,49167962,49167009,49161622,49155909	Gene ID= ENSG00000204161.13 TPM= 4.67 Transcript Type= NA
chr10	49154728	49188402	49154728	49188402	-	transcript2014.chr10.nic@C10orf128	transcript2014.chr10.nic	protein_coding	49188294,49167909,49166869,49161599,49154728	49188402,49167962,49167009,49161622,49155909	Gene ID= ENSG00000204161.13 TPM= 5.84 Transcript Type= NA
chr10	49515201	49539040	49515201	49539040	-	ENST00000447839.6@ERCC6	ENST00000447839.6	protein_coding	49538962,49532543,49530720,49528417,49524033,49515201	49539040,49532978,49530840,49528525,49524777,49517121	Gene ID= ENSG00000225830.12 TPM= 4.67 Transcript Type= protein_coding
chr10	49818279	49942007	49818279	49942007	-	transcript2035.chr10.nnic@PARG	transcript2035.chr10.nnic	protein_coding	49941509,49935076,49933177,49932096,49922547,49922336,49915917,49885203,49879673,49869476,49865321,49861588,49857306,49843554,49841950,49832803,49820165,49818279	49942007,49935142,49934163,49932283,49922669,49922419,49915991,49885295,49879830,49869555,49865381,49861663,49857453,49843632,49842058,49832908,49820293,49819494	Gene ID= ENSG00000227345.8 TPM= 11.68 Transcript Type= NA
chr10	49818279	49941995	49818279	49941995	-	transcript2042.chr10.nnic@PARG	transcript2042.chr10.nnic	protein_coding	49941509,49933177,49932096,49922547,49922336,49915917,49885203,49879673,49869476,49865321,49861588,49857306,49843554,49841950,49832803,49820165,49818279	49941995,49934163,49932283,49922669,49922419,49915991,49885295,49879830,49869555,49865381,49861663,49857453,49843632,49842058,49832908,49820293,49819494	Gene ID= ENSG00000227345.8 TPM= 4.67 Transcript Type= NA
chr10	49981421	49985104	49981421	49985104	-	transcript2053.chr10.nnic@NA	transcript2053.chr10.nnic	NA	49981421	49985104	Gene ID= novel_gene_chr10_2054 TPM= 7.01 Transcript Type= NA
chr10	50067885	50133146	50067885	50133146	+	transcript2056.chr10.nnic@WASHC2A	transcript2056.chr10.nnic	protein_coding	50067885,50068105,50069547,50078675,50080758,50082664,50084072,50085497,50087275,50090776,50091431,50092162,50093268,50093860,50095148,50095599,50097675,50099978,50104042,50106334,50110101,50113895,50117906,50119587,50125113,50125369,50126057,50127160,50127583,50129419,50130901,50132806	50068008,50068227,50069711,50078737,50080931,50082757,50084165,50085558,50087322,50090886,50091518,50092233,50093386,50093917,50095207,50095778,50097802,50100064,50104143,50106465,50110270,50113997,50118058,50119769,50125241,50125449,50126179,50127222,50127795,50130039,50131078,50133146	Gene ID= ENSG00000099290.15 TPM= 2.85 Transcript Type= NA
chr10	50067885	50133506	50067885	50133506	+	transcript2063.chr10.nnic@WASHC2A	transcript2063.chr10.nnic	protein_coding	50067885,50068105,50069591,50078675,50080758,50084072,50085497,50087275,50090776,50091431,50092162,50093268,50093860,50095148,50095599,50097675,50099978,50104042,50106334,50110101,50113895,50117906,50119587,50125113,50125369,50126057,50127160,50127583,50129419,50130901,50132806	50068008,50068227,50069711,50078737,50080931,50084165,50085558,50087322,50090886,50091518,50092233,50093386,50093917,50095207,50095778,50097802,50100064,50104143,50106465,50110270,50113997,50118058,50119769,50125241,50125449,50126179,50127222,50127795,50130039,50131078,50133506	Gene ID= ENSG00000099290.15 TPM= 7.39 Transcript Type= NA
chr10	50067888	50133506	50067888	50133506	+	ENST00000351071.10@WASHC2A	ENST00000351071.10	protein_coding	50067888,50068105,50069547,50078675,50080758,50084072,50085497,50087275,50090776,50091431,50092162,50093268,50093860,50095148,50095599,50097675,50099978,50104042,50106334,50110101,50113895,50117906,50119587,50125113,50125369,50126057,50127583,50129419,50130901,50132806	50068008,50068227,50069711,50078737,50080931,50084165,50085558,50087322,50090886,50091518,50092233,50093386,50093917,50095207,50095778,50097802,50100064,50104143,50106465,50110270,50113997,50118058,50119769,50125241,50125449,50126179,50127795,50130039,50131078,50133506	Gene ID= ENSG00000099290.15 TPM= 5.77 Transcript Type= protein_coding
chr10	50067885	50133506	50067885	50133506	+	transcript2066.chr10.nnic@WASHC2A	transcript2066.chr10.nnic	protein_coding	50067885,50068105,50069547,50078675,50080758,50084072,50085497,50087275,50090776,50091431,50092162,50093268,50093860,50095148,50095599,50097675,50099978,50104042,50106334,50110101,50113895,50117906,50119587,50125113,50125369,50127160,50127583,50129419,50130901,50132806	50068008,50068227,50069711,50078737,50080931,50084165,50085558,50087322,50090886,50091518,50092233,50093386,50093917,50095207,50095778,50097802,50100064,50104143,50106465,50110270,50113997,50118058,50119769,50125241,50125449,50127222,50127795,50130039,50131078,50133506	Gene ID= ENSG00000099290.15 TPM= 3.43 Transcript Type= NA
chr10	50067885	50133506	50067885	50133506	+	transcript2071.chr10.nnic@WASHC2A	transcript2071.chr10.nnic	protein_coding	50067885,50068105,50069547,50078675,50080758,50084072,50085497,50087275,50090776,50091431,50092162,50093268,50093860,50095148,50095599,50097675,50104042,50106334,50110101,50113895,50117906,50119587,50125113,50125369,50126057,50127160,50127583,50129419,50130901,50132806	50068008,50068227,50069711,50078737,50080931,50084165,50085558,50087322,50090886,50091518,50092233,50093386,50093917,50095207,50095778,50097802,50104143,50106465,50110270,50113997,50118058,50119769,50125241,50125449,50126179,50127222,50127795,50130039,50131078,50133506	Gene ID= ENSG00000099290.15 TPM= 7.87 Transcript Type= NA
chr10	50067885	50133506	50067885	50133506	+	transcript2073.chr10.nic@WASHC2A	transcript2073.chr10.nic	protein_coding	50067885,50068105,50069547,50078675,50080758,50084072,50085497,50087275,50090776,50091431,50093268,50093860,50095148,50095599,50097675,50099978,50104042,50106334,50110101,50113895,50117906,50119587,50125113,50125369,50126057,50127160,50127583,50129419,50130901,50132806	50068008,50068227,50069711,50078737,50080931,50084165,50085558,50087322,50090886,50091518,50093386,50093917,50095207,50095778,50097802,50100064,50104143,50106465,50110270,50113997,50118058,50119769,50125241,50125449,50126179,50127222,50127795,50130039,50131078,50133506	Gene ID= ENSG00000099290.15 TPM= 5.18 Transcript Type= NA
chr10	50067885	50133146	50067885	50133146	+	transcript2074.chr10.nic@WASHC2A	transcript2074.chr10.nic	protein_coding	50067885,50068105,50069547,50078675,50080758,50084072,50085497,50087275,50090776,50091431,50093268,50093860,50095148,50095599,50097675,50099978,50104042,50106334,50110101,50113895,50117906,50119587,50125113,50125369,50126057,50127160,50127583,50129419,50130901,50132806	50068008,50068227,50069711,50078737,50080931,50084165,50085558,50087322,50090886,50092233,50093386,50093917,50095207,50095778,50097802,50100064,50104143,50106465,50110270,50113997,50118058,50119769,50125241,50125449,50126179,50127222,50127795,50130039,50131078,50133146	Gene ID= ENSG00000099290.15 TPM= 2.85 Transcript Type= NA
chr10	50067885	50133506	50067885	50133506	+	transcript2076.chr10.nnic@WASHC2A	transcript2076.chr10.nnic	protein_coding	50067885,50068105,50069547,50078675,50080758,50084072,50085497,50087275,50090776,50091431,50093268,50093860,50095148,50095599,50097675,50104042,50106334,50110101,50113895,50117906,50119587,50125113,50125369,50126057,50127160,50127583,50129419,50130901,50132806	50068008,50068227,50069711,50078737,50080931,50084165,50085558,50087322,50090886,50091518,50093386,50093917,50095207,50095778,50097802,50104143,50106465,50110270,50113997,50118058,50119769,50125241,50125449,50126179,50127222,50127795,50130039,50131078,50133506	Gene ID= ENSG00000099290.15 TPM= 3.2 Transcript Type= NA
chr10	50067961	50133146	50067961	50133146	+	ENST00000282633.9@WASHC2A	ENST00000282633.9	protein_coding	50067961,50068105,50069547,50078675,50080758,50084072,50085497,50087275,50090776,50091431,50092162,50093268,50093860,50095148,50095599,50097675,50099978,50104042,50106334,50110101,50113895,50117906,50119587,50125113,50125369,50126057,50127160,50127583,50129419,50130901,50132806	50068008,50068227,50069711,50078737,50080931,50084165,50085558,50087322,50090886,50091518,50092233,50093386,50093917,50095207,50095778,50097802,50100064,50104143,50106465,50110270,50113997,50118058,50119769,50125241,50125449,50126179,50127222,50127795,50130039,50131078,50133146	Gene ID= ENSG00000099290.15 TPM= 57.6 Transcript Type= protein_coding
chr10	50298855	50304303	50298855	50304303	+	transcript2085.chr10.nnic@NA	transcript2085.chr10.nnic	NA	50298855	50304303	Gene ID= novel_gene_chr10_2086 TPM= 3.5 Transcript Type= NA
chr10	50305600	50418474	50305600	50418474	-	transcript2094.chr10.nic@SGMS1	transcript2094.chr10.nic	protein_coding	50418064,50343492,50327205,50311262,50307982,50305600	50418474,50344345,50327322,50311415,50308148,50307321	Gene ID= ENSG00000198964.13 TPM= 34.25 Transcript Type= NA
chr10	50305600	50418440	50305600	50418440	-	transcript2097.chr10.nnic@SGMS1	transcript2097.chr10.nnic	protein_coding	50418064,50327205,50311262,50307982,50305600	50418440,50327322,50311415,50308148,50307321	Gene ID= ENSG00000198964.13 TPM= 6.22 Transcript Type= NA
chr10	50305600	50623983	50305600	50623983	-	ENST00000361781.6@SGMS1	ENST00000361781.6	protein_coding	50623707,50590153,50519831,50466890,50460673,50433476,50343492,50327205,50311262,50307982,50305600	50623983,50590247,50519921,50466932,50460814,50433556,50344345,50327322,50311415,50308148,50307321	Gene ID= ENSG00000198964.13 TPM= 35.41 Transcript Type= protein_coding
chr10	50739318	50757188	50739318	50757188	+	ENST00000374007.5@ASAH2B	ENST00000374007.5	protein_coding	50739318,50742915,50745128,50749343,50752468,50754551	50740002,50743010,50745274,50749402,50752556,50757188	Gene ID= ENSG00000204147.9 TPM= 5.84 Transcript Type= protein_coding
chr10	50991285	50994825	50991285	50994825	+	transcript2114.chr10.nnic@NA	transcript2114.chr10.nnic	NA	50991285	50994825	Gene ID= novel_gene_chr10_2115 TPM= 3.5 Transcript Type= NA
chr10	51695487	51699591	51695487	51699591	-	ENST00000331173.5@CSTF2T	ENST00000331173.5	protein_coding	51695487	51699591	Gene ID= ENSG00000177613.8 TPM= 7.01 Transcript Type= protein_coding
chr10	56357228	56361275	56357228	56361275	-	ENST00000373944.7@ZWINT	ENST00000373944.7	protein_coding	56361196,56360293,56360018,56359687,56359476,56358805,56358556,56358377,56357228	56361275,56360383,56360141,56359853,56359532,56358947,56358724,56358459,56358185	Gene ID= ENSG00000122952.16 TPM= 4.67 Transcript Type= protein_coding
chr10	56357438	56361273	56357438	56361273	-	ENST00000395405.5@ZWINT	ENST00000395405.5	protein_coding	56361196,56360293,56360018,56359687,56359476,56358805,56358556,56357438	56361273,56360383,56360141,56359853,56359532,56358947,56358724,56358459	Gene ID= ENSG00000122952.16 TPM= 1.17 Transcript Type= protein_coding
chr10	58191517	58267934	58191517	58267934	-	ENST00000373935.3@IPMK	ENST00000373935.3	protein_coding	58267422,58237729,58227043,58216145,58199240,58191517	58267934,58237814,58227139,58216317,58199321,58196698	Gene ID= ENSG00000151151.5 TPM= 4.67 Transcript Type= protein_coding
chr10	58269058	58289586	58269058	58289586	+	ENST00000333926.5@CISD1	ENST00000333926.5	protein_coding	58269058,58277117,58287561	58269304,58277322,58289586	Gene ID= ENSG00000122873.11 TPM= 8.17 Transcript Type= protein_coding
chr10	58334975	58370753	58334975	58370753	+	ENST00000373910.8@UBE2D1	ENST00000373910.8	protein_coding	58334975,58361338,58361495,58363609,58364771,58367923,58368720	58335225,58361401,58361526,58363686,58364876,58368016,58370753	Gene ID= ENSG00000072401.14 TPM= 22.18 Transcript Type= protein_coding
chr10	58385022	58399221	58385022	58399221	+	ENST00000487519.5@TFAM	ENST00000487519.5	protein_coding	58385022,58386220,58388190,58388670,58390765,58394358,58394928	58385648,58386338,58388260,58388819,58390860,58394414,58399221	Gene ID= ENSG00000108064.10 TPM= 2.34 Transcript Type= protein_coding
chr10	59246134	59362691	59246134	59362691	-	transcript2161.chr10.nic@FAM13C	transcript2161.chr10.nic	protein_coding	59362576,59362399,59355887,59352270,59323988,59302801,59283363,59269899,59268553,59264085,59262434,59254348,59252799,59251575,59246134	59362691,59362437,59355943,59352474,59324106,59302864,59283447,59270109,59268691,59264166,59262645,59254443,59252995,59251676,59247737	Gene ID= ENSG00000148541.12 TPM= 3.7 Transcript Type= NA
chr10	59246134	59362579	59246134	59362579	-	transcript2163.chr10.nic@FAM13C	transcript2163.chr10.nic	protein_coding	59362399,59355887,59352270,59323988,59302801,59283363,59269899,59268553,59264085,59262434,59254348,59252799,59251575,59246134	59362579,59355943,59352474,59324106,59302864,59283447,59270109,59268691,59264166,59262645,59254443,59252995,59251676,59247737	Gene ID= ENSG00000148541.12 TPM= 4.87 Transcript Type= NA
chr10	59246129	59362550	59246129	59362550	-	ENST00000618804.4@FAM13C	ENST00000618804.4	protein_coding	59362399,59355887,59352270,59323988,59302801,59283363,59269899,59268553,59264085,59262434,59254348,59252799,59251575,59246129	59362550,59355943,59352474,59324106,59302864,59283447,59270109,59268691,59264166,59262645,59254443,59252998,59251676,59247737	Gene ID= ENSG00000148541.12 TPM= 11.29 Transcript Type= protein_coding
chr10	59650761	59710079	59650761	59710079	-	ENST00000395348.7@SLC16A9	ENST00000395348.7	protein_coding	59709479,59684096,59672770,59664227,59653675,59650761	59710079,59684327,59672913,59664322,59654589,59652950	Gene ID= ENSG00000165449.11 TPM= 2.34 Transcript Type= protein_coding
chr10	60029691	60044803	60029691	60044803	-	ENST00000489505.2@ANK3	ENST00000489505.2	protein_coding	60042672,60029691	60044803,60029826	Gene ID= ENSG00000151150.21 TPM= 1.17 Transcript Type= retained_intron
chr10	60642638	60644850	60642638	60644850	+	transcript2182.chr10.nnic@NA	transcript2182.chr10.nnic	NA	60642638	60644850	Gene ID= novel_gene_chr10_2183 TPM= 2.34 Transcript Type= NA
chr10	60778454	60794852	60778454	60794852	+	ENST00000395284.7@CDK1	ENST00000395284.7	protein_coding	60778454,60780141,60784705,60785664,60788060,60791890,60792148,60793877	60778570,60780202,60784861,60785787,60788230,60792053,60792289,60794852	Gene ID= ENSG00000170312.15 TPM= 1.17 Transcript Type= protein_coding
chr10	60869437	60944192	60869437	60944192	-	transcript2186.chr10.nic@RHOBTB1	transcript2186.chr10.nic	protein_coding	60943971,60941804,60911351,60910887,60892810,60888212,60886112,60877908,60874954,60872185,60871444,60869437	60944192,60941854,60911552,60910990,60892995,60889185,60886230,60878058,60875042,60872290,60871651,60871325	Gene ID= ENSG00000072422.16 TPM= 2.63 Transcript Type= NA
chr10	60869438	60944725	60869438	60944725	-	transcript2191.chr10.nnic@RHOBTB1	transcript2191.chr10.nnic	protein_coding	60944650,60941804,60911351,60910887,60892810,60888212,60886112,60877908,60874954,60872185,60869438	60944725,60941854,60911552,60910990,60892995,60889185,60886230,60878058,60875042,60872290,60871651	Gene ID= ENSG00000072422.16 TPM= 5.35 Transcript Type= NA
chr10	60869438	60944202	60869438	60944202	-	transcript2196.chr10.nnic@RHOBTB1	transcript2196.chr10.nnic	protein_coding	60943971,60941804,60911351,60892810,60888212,60886112,60877908,60874954,60872185,60869438	60944202,60941854,60911552,60892995,60889185,60886230,60878058,60875042,60872290,60871651	Gene ID= ENSG00000072422.16 TPM= 6.52 Transcript Type= NA
chr10	60869438	60944247	60869438	60944247	-	ENST00000337910.9@RHOBTB1	ENST00000337910.9	protein_coding	60943971,60941804,60911351,60910887,60892810,60888212,60886112,60877908,60874954,60872185,60869438	60944247,60941854,60911552,60910990,60892995,60889185,60886230,60878058,60875042,60872290,60871651	Gene ID= ENSG00000072422.16 TPM= 20.53 Transcript Type= protein_coding
chr10	61901300	62096944	61901300	62096944	+	ENST00000279873.11@ARID5B	ENST00000279873.11	protein_coding	61901300,61902159,61940183,62000091,62050888,62057117,62059243,62069700,62085702,62090862	61901730,61902413,61940408,62000321,62051000,62057318,62059295,62069797,62085900,62096944	Gene ID= ENSG00000150347.14 TPM= 58.38 Transcript Type= protein_coding
chr10	62183035	62268844	62183035	62268844	-	transcript2216.chr10.nic@RTKN2	transcript2216.chr10.nic	protein_coding	62268551,62262625,62245999,62241142,62239648,62236066,62223238,62218195,62217118,62204857,62199754,62198283,62183035	62268844,62262821,62246057,62241195,62239765,62236263,62223332,62218301,62217249,62205022,62199861,62198443,62184387	Gene ID= ENSG00000182010.10 TPM= 15.31 Transcript Type= NA
chr10	62193194	62268707	62193194	62268707	-	ENST00000373789.7@RTKN2	ENST00000373789.7	protein_coding	62268551,62262625,62245999,62241142,62239648,62236066,62223238,62218195,62217118,62204857,62199754,62193194	62268707,62262821,62246057,62241195,62239765,62236263,62223332,62218301,62217249,62205022,62199861,62198443	Gene ID= ENSG00000182010.10 TPM= 38.53 Transcript Type= protein_coding
chr10	62264838	62268844	62264838	62268844	-	transcript2273.chr10.nnic@NA	transcript2273.chr10.nnic	NA	62264838	62268844	Gene ID= novel_gene_chr10_2274 TPM= 3.5 Transcript Type= NA
chr10	62374192	62402458	62374192	62402458	+	ENST00000395254.7@ZNF365	ENST00000395254.7	protein_coding	62374192,62376181,62388396,62398740,62399528	62374458,62376936,62388576,62398777,62402458	Gene ID= ENSG00000138311.15 TPM= 8.17 Transcript Type= protein_coding
chr10	62804857	62808483	62804857	62808483	+	ENST00000373783.2@ADO	ENST00000373783.2	protein_coding	62804857	62808483	Gene ID= ENSG00000181915.4 TPM= 10.51 Transcript Type= protein_coding
chr10	62811996	62816355	62811996	62816355	-	ENST00000242480.3@EGR2	ENST00000242480.3	protein_coding	62815861,62811996	62816355,62814468	Gene ID= ENSG00000122877.15 TPM= 34.44 Transcript Type= protein_coding
chr10	62812000	62816315	62812000	62816315	-	ENST00000411732.3@EGR2	ENST00000411732.3	protein_coding	62816070,62815861,62812000	62816315,62815969,62814468	Gene ID= ENSG00000122877.15 TPM= 20.43 Transcript Type= protein_coding
chr10	63133313	63155026	63133313	63155026	+	transcript2299.chr10.nnic@NRBF2	transcript2299.chr10.nnic	protein_coding	63133313,63146209,63153511	63133500,63146293,63155026	Gene ID= ENSG00000148572.15 TPM= 2.34 Transcript Type= NA
chr10	63133290	63155026	63133290	63155026	+	ENST00000277746.10@NRBF2	ENST00000277746.10	protein_coding	63133290,63146209,63152150,63153511	63133500,63146293,63152190,63155026	Gene ID= ENSG00000148572.15 TPM= 58.38 Transcript Type= protein_coding
chr10	63380106	63522099	63380106	63522099	-	transcript2319.chr10.nic@JMJD1C	transcript2319.chr10.nic	protein_coding	63521738,63380106	63522099,63380482	Gene ID= ENSG00000171988.18 TPM= 2.34 Transcript Type= NA
chr10	63463984	63465991	63463984	63465991	-	transcript2322.chr10.nnic@NA	transcript2322.chr10.nnic	NA	63463984	63465991	Gene ID= novel_gene_chr10_2323 TPM= 2.34 Transcript Type= NA
chr10	63521351	63602123	63521351	63602123	+	transcript2316.chr10.nic@REEP3	transcript2316.chr10.nic	protein_coding	63521351,63566338,63594778,63598024,63599170	63521577,63566410,63594854,63598144,63602123	Gene ID= ENSG00000165476.13 TPM= 2.34 Transcript Type= NA
chr10	63521363	63625123	63521363	63625123	+	ENST00000373758.4@REEP3	ENST00000373758.4	protein_coding	63521363,63566338,63594778,63598024,63599170,63610187,63619655,63620813	63521577,63566410,63594854,63598144,63599283,63610334,63619800,63625123	Gene ID= ENSG00000165476.13 TPM= 37.36 Transcript Type= protein_coding
chr10	63533712	63539107	63533712	63539107	-	transcript2320.chr10.nnic@NA	transcript2320.chr10.nnic	NA	63533712	63539107	Gene ID= novel_gene_chr10_2321 TPM= 4.67 Transcript Type= NA
chr10	67796665	67838164	67796665	67838164	-	ENST00000225171.6@DNAJC12	ENST00000225171.6	protein_coding	67837934,67823314,67811524,67805583,67796665	67838164,67823392,67811663,67805787,67797210	Gene ID= ENSG00000108176.14 TPM= 1.17 Transcript Type= protein_coding
chr10	67885193	67918386	67885193	67918386	+	transcript2329.chr10.nic@SIRT1	transcript2329.chr10.nic	protein_coding	67885193,67887417,67888882,67891402,67906790,67908046,67909256,67912474,67916265	67885399,67887533,67889123,67891554,67906937,67908125,67909442,67913031,67918386	Gene ID= ENSG00000096717.11 TPM= 5.25 Transcript Type= NA
chr10	67884669	67918390	67884669	67918390	+	ENST00000212015.10@SIRT1	ENST00000212015.10	protein_coding	67884669,67887417,67888882,67891402,67906790,67908046,67909256,67912474,67916265	67885151,67887533,67889123,67891554,67906937,67908125,67909442,67913031,67918390	Gene ID= ENSG00000096717.11 TPM= 36.78 Transcript Type= protein_coding
chr10	67922489	68075348	67922489	68075348	-	ENST00000373700.8@HERC4	ENST00000373700.8	protein_coding	68075144,68073657,68072883,68044404,68038093,68033965,68032778,68025546,68014026,67992606,67992199,67991140,67990904,67990211,67988663,67966683,67956878,67954963,67954595,67940939,67939588,67936153,67932597,67925085,67922489	68075348,68073686,68073186,68044563,68038169,68034186,68032869,68025676,68014186,67992682,67992323,67991199,67991015,67990400,67988835,67966802,67956976,67955130,67954738,67941105,67939654,67936235,67932780,67925187,67923139	Gene ID= ENSG00000148634.15 TPM= 23.94 Transcript Type= protein_coding
chr10	67921908	68075283	67921908	68075283	-	ENST00000395198.7@HERC4	ENST00000395198.7	protein_coding	68075144,68073657,68072883,68044404,68038093,68033965,68032778,68025546,68014026,67992606,67992199,67991140,67990904,67990211,67988663,67966683,67959113,67956878,67954963,67954595,67940939,67939588,67936153,67932597,67925085,67921908	68075283,68073686,68073186,68044563,68038169,68034186,68032869,68025676,68014186,67992682,67992323,67991199,67991015,67990400,67988835,67966802,67959136,67956976,67955130,67954738,67941105,67939654,67936235,67932780,67925187,67923139	Gene ID= ENSG00000148634.15 TPM= 12.26 Transcript Type= protein_coding
chr10	68067689	68075283	68067689	68075283	-	ENST00000492996.6@HERC4	ENST00000492996.6	protein_coding	68075144,68073657,68072883,68067689	68075283,68073686,68073186,68070599	Gene ID= ENSG00000148634.15 TPM= 1.17 Transcript Type= protein_coding
chr10	68282660	68332927	68282660	68332927	-	ENST00000358769.6@PBLD	ENST00000358769.6	protein_coding	68332784,68306761,68296886,68296266,68292129,68292010,68288931,68288483,68285348,68282660	68332927,68306903,68296985,68296364,68292238,68292039,68289019,68288661,68285410,68284289	Gene ID= ENSG00000108187.15 TPM= 1.17 Transcript Type= protein_coding
chr10	68332053	68343191	68332053	68343191	+	transcript2363.chr10.nic@HNRNPH3	transcript2363.chr10.nic	protein_coding	68332053,68337199,68337858,68338503,68339140,68339440,68341174,68341585,68341759,68341978	68332235,68337333,68337996,68338642,68339226,68339555,68341309,68341680,68341851,68343191	Gene ID= ENSG00000096746.17 TPM= 4.29 Transcript Type= NA
chr10	68332075	68343187	68332075	68343187	+	ENST00000265866.11@HNRNPH3	ENST00000265866.11	protein_coding	68332075,68337199,68337858,68338503,68339140,68339440,68341174,68341585,68341759,68341978	68332216,68337333,68337996,68338687,68339226,68339555,68341309,68341680,68341851,68343187	Gene ID= ENSG00000096746.17 TPM= 48.65 Transcript Type= protein_coding
chr10	68332122	68342272	68332122	68342272	+	ENST00000354695.5@HNRNPH3	ENST00000354695.5	protein_coding	68332122,68337199,68337858,68338503,68339140,68339440,68341174,68341585,68341759,68341978	68332216,68337333,68337996,68338642,68339226,68339555,68341309,68341680,68341851,68342272	Gene ID= ENSG00000096746.17 TPM= 3.89 Transcript Type= protein_coding
chr10	68343827	68407290	68343827	68407290	-	ENST00000602465.5@RUFY2	ENST00000602465.5	protein_coding	68407186,68404671,68401620,68396780,68394328,68394075,68393138,68386059,68384051,68383798,68381232,68379424,68376853,68363984,68363590,68355353,68346007,68343827	68407290,68404844,68401737,68396881,68394451,68394136,68393203,68386128,68384152,68383914,68381399,68379521,68376972,68364113,68363684,68355401,68346084,68345911	Gene ID= ENSG00000204130.12 TPM= 1.17 Transcript Type= protein_coding
chr10	68518143	68520006	68518143	68520006	+	transcript2402.chr10.nnic@NA	transcript2402.chr10.nnic	NA	68518143	68520006	Gene ID= novel_gene_chr10_2403 TPM= 2.34 Transcript Type= NA
chr10	68721144	68792375	68721144	68792375	+	ENST00000630771.2@CCAR1	ENST00000630771.2	protein_coding	68721144,68722455,68736876,68737845,68740629,68742376,68747161,68747374,68749136,68749524,68753852,68754714,68755370,68757294,68761007,68765888,68771206,68772988,68786136,68786546,68787927,68788143,68789710,68791207	68721282,68722577,68737048,68737889,68740661,68742569,68747275,68747566,68749265,68749685,68754077,68754827,68755536,68757377,68761192,68766079,68771445,68773099,68786218,68786692,68788047,68788328,68789915,68792375	Gene ID= ENSG00000060339.13 TPM= 3.5 Transcript Type= protein_coding
chr10	68721190	68771431	68721190	68771431	+	transcript2414.chr10.nic@CCAR1	transcript2414.chr10.nic	protein_coding	68721190,68722455,68736876,68737845,68740629,68742376,68747161,68747374,68749136,68749524,68753852,68754714,68755370,68756273,68757294,68761007,68765888,68771206	68721282,68722577,68737048,68737889,68740661,68742569,68747275,68747566,68749265,68749685,68754077,68754827,68755536,68756483,68757377,68761192,68766079,68771431	Gene ID= ENSG00000060339.13 TPM= 3.5 Transcript Type= NA
chr10	68721214	68792377	68721214	68792377	+	ENST00000265872.10@CCAR1	ENST00000265872.10	protein_coding	68721214,68722455,68736876,68737845,68740629,68742376,68747161,68747374,68749136,68749524,68753852,68754714,68755370,68756273,68757294,68761007,68765888,68771206,68772988,68786136,68786546,68787927,68788143,68789710,68791207	68721282,68722577,68737048,68737889,68740661,68742569,68747275,68747566,68749265,68749685,68754077,68754827,68755536,68756483,68757377,68761192,68766079,68771445,68773099,68786218,68786692,68788047,68788328,68789915,68792377	Gene ID= ENSG00000060339.13 TPM= 3.5 Transcript Type= protein_coding
chr10	68721227	68771444	68721227	68771444	+	ENST00000541012.5@CCAR1	ENST00000541012.5	protein_coding	68721227,68722455,68736876,68737845,68740629,68742376,68747161,68747374,68749136,68749524,68753852,68754714,68755370,68757294,68761007,68765888,68771206	68721282,68722577,68737048,68737889,68740661,68742569,68747275,68747566,68749265,68749685,68754077,68754827,68755536,68757377,68761192,68766079,68771444	Gene ID= ENSG00000060339.13 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr10	68901264	68946847	68901264	68946847	+	transcript2429.chr10.nic@DDX50	transcript2429.chr10.nic	protein_coding	68901264,68906226,68906711,68910307,68911068,68913162,68913391,68914059,68919832,68934199,68934799,68936006,68936936,68941060,68943213,68946352	68901471,68906337,68907007,68910382,68911246,68913279,68913576,68914204,68919981,68934360,68934918,68936079,68937095,68941194,68943257,68946847	Gene ID= ENSG00000107625.12 TPM= 4.67 Transcript Type= NA
chr10	68901278	68946847	68901278	68946847	+	ENST00000373585.7@DDX50	ENST00000373585.7	protein_coding	68901278,68906711,68910307,68911068,68913162,68913391,68914059,68919832,68934199,68934799,68936006,68936936,68941060,68943213,68946352	68901471,68907007,68910382,68911246,68913279,68913576,68914204,68919981,68934360,68934918,68936079,68937095,68941194,68943257,68946847	Gene ID= ENSG00000107625.12 TPM= 40.87 Transcript Type= protein_coding
chr10	68956128	68985073	68956128	68985073	+	ENST00000354185.8@DDX21	ENST00000354185.8	protein_coding	68956128,68959806,68962082,68963291,68965377,68967018,68968976,68970201,68971891,68973545,68974670,68977529,68978842,68981537,68982543	68956312,68960249,68962157,68963469,68965494,68967203,68969121,68970350,68972052,68973664,68974743,68977688,68978976,68981581,68985073	Gene ID= ENSG00000165732.12 TPM= 16.35 Transcript Type= protein_coding
chr10	68956440	68985067	68956440	68985067	+	ENST00000620315.1@DDX21	ENST00000620315.1	protein_coding	68956440,68959806,68962082,68963291,68965377,68967018,68968976,68970201,68971891,68973545,68974670,68977529,68978842,68981537,68982543	68956748,68960249,68962157,68963469,68965494,68967203,68969121,68970350,68972052,68973664,68974743,68977688,68978976,68981581,68985067	Gene ID= ENSG00000165732.12 TPM= 8.17 Transcript Type= protein_coding
chr10	68956126	68973209	68956126	68973209	+	transcript2449.chr10.nic@DDX21	transcript2449.chr10.nic	protein_coding	68956126,68959806,68962082,68963291,68965377,68967018,68968976,68970201,68971891	68956312,68960249,68962157,68963469,68965494,68967203,68969121,68970350,68973209	Gene ID= ENSG00000165732.12 TPM= 3.5 Transcript Type= NA
chr10	68988721	69016982	68988721	69016982	+	ENST00000361983.6@KIF1BP	ENST00000361983.6	protein_coding	68988721,69000424,69005046,69005732,69008841,69010900,69015541	68989258,69000522,69005125,69005915,69008925,69011015,69016982	Gene ID= ENSG00000198954.7 TPM= 42.03 Transcript Type= protein_coding
chr10	68988796	69016930	68988796	69016930	+	ENST00000635779.1@KIF1BP	ENST00000635779.1	protein_coding	68988796,69000424,69005046,69005732,69007627,69008841,69010900,69015541	68989258,69000522,69005125,69005915,69007751,69008925,69011015,69016930	Gene ID= ENSG00000198954.7 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr10	69057618	69104811	69057618	69104811	+	transcript2454.chr10.nnic@SRGN	transcript2454.chr10.nnic	protein_coding	69057618,69088028,69097084,69103871	69058171,69088236,69097231,69104811	Gene ID= ENSG00000122862.4 TPM= 8.17 Transcript Type= NA
chr10	69088118	69104811	69088118	69104811	+	ENST00000242465.3@SRGN	ENST00000242465.3	protein_coding	69088118,69097084,69103871	69088236,69097231,69104811	Gene ID= ENSG00000122862.4 TPM= 96.91 Transcript Type= protein_coding
chr10	69124152	69172856	69124152	69172856	+	ENST00000395098.5@VPS26A	ENST00000395098.5	protein_coding	69124152,69132898,69155812,69157007,69158047,69162406,69166042,69171156	69124280,69133047,69155887,69157163,69158211,69162512,69166110,69172856	Gene ID= ENSG00000122958.14 TPM= 5.06 Transcript Type= protein_coding
chr10	69124152	69172856	69124152	69172856	+	ENST00000263559.10@VPS26A	ENST00000263559.10	protein_coding	69124152,69132898,69155812,69157007,69158047,69162406,69166042,69168489,69171156	69124280,69133047,69155887,69157163,69158211,69162512,69166110,69168631,69172856	Gene ID= ENSG00000122958.14 TPM= 176.69 Transcript Type= protein_coding
chr10	69180237	69209098	69180237	69209098	+	transcript2469.chr10.nic@SUPV3L1	transcript2469.chr10.nic	protein_coding	69180237,69182520,69185987,69186443,69187642,69189267,69191655,69195188,69196992,69198372,69199104,69200280,69202439,69202867,69207793,69208600	69180562,69182654,69186064,69186550,69187756,69189435,69191766,69195265,69197083,69198552,69199197,69200499,69202519,69203043,69207941,69209098	Gene ID= ENSG00000156502.13 TPM= 7.01 Transcript Type= NA
chr10	69180232	69209098	69180232	69209098	+	ENST00000359655.8@SUPV3L1	ENST00000359655.8	protein_coding	69180232,69185987,69186443,69187642,69189267,69191655,69195188,69196992,69198372,69199104,69200280,69202439,69202867,69207793,69208600	69180562,69186064,69186550,69187756,69189435,69191766,69195265,69197083,69198552,69199197,69200499,69202519,69203043,69207941,69209098	Gene ID= ENSG00000156502.13 TPM= 26.85 Transcript Type= protein_coding
chr10	69180234	69209098	69180234	69209098	+	transcript2473.chr10.nic@SUPV3L1	transcript2473.chr10.nic	protein_coding	69180234,69185987,69186443,69187642,69189267,69191655,69195188,69196992,69198372,69199104,69202439,69202867,69207793,69208600	69180562,69186064,69186550,69187756,69189435,69191766,69195265,69197083,69198552,69200499,69202519,69203043,69207941,69209098	Gene ID= ENSG00000156502.13 TPM= 3.5 Transcript Type= NA
chr10	69220303	69267559	69220303	69267559	+	ENST00000354624.5@HKDC1	ENST00000354624.5	protein_coding	69220303,69227207,69232764,69233014,69239042,69240652,69243182,69246079,69247360,69248424,69250290,69250533,69257036,69257327,69258776,69261139,69265585,69266610	69220498,69227369,69232912,69233133,69239137,69240751,69243365,69246234,69247593,69248728,69250435,69250652,69257131,69257426,69258959,69261294,69265818,69267559	Gene ID= ENSG00000156510.12 TPM= 9.34 Transcript Type= protein_coding
chr10	69315854	69401879	69315854	69401879	+	ENST00000298649.7@HK1	ENST00000298649.7	protein_coding	69315854,69343827,69359897,69364783,69368536,69369237,69369441,69376934,69379862,69382487,69384333,69384796,69386323,69389197,69392125,69394950,69398595,69400991	69316014,69343989,69360045,69364902,69368631,69369336,69369624,69377089,69380095,69382791,69384481,69384915,69386418,69389296,69392308,69395105,69398828,69401879	Gene ID= ENSG00000156515.21 TPM= 10.77 Transcript Type= protein_coding
chr10	69318844	69401882	69318844	69401882	+	ENST00000359426.6@HK1	ENST00000359426.6	protein_coding	69318844,69343827,69359897,69364783,69368536,69369237,69369441,69376934,69379862,69382487,69384333,69384796,69386323,69389197,69392125,69394950,69398595,69400991	69319010,69343989,69360045,69364902,69368631,69369336,69369624,69377089,69380095,69382791,69384481,69384915,69386418,69389296,69392308,69395105,69398828,69401882	Gene ID= ENSG00000156515.21 TPM= 335.36 Transcript Type= protein_coding
chr10	69403903	69409282	69403903	69409282	-	ENST00000373307.5@TACR2	ENST00000373307.5	protein_coding	69408922,69407084,69403903	69409282,69407280,69405084	Gene ID= ENSG00000075073.14 TPM= 1.17 Transcript Type= protein_coding
chr10	69451436	69507669	69451436	69507669	+	transcript2498.chr10.nnic@TSPAN15	transcript2498.chr10.nnic	protein_coding	69451436,69483691,69485141,69494622,69495594,69498280,69504438,69506124,69506829	69451690,69483876,69485215,69494821,69495689,69498396,69504485,69506240,69507669	Gene ID= ENSG00000099282.9 TPM= 2.34 Transcript Type= NA
chr10	69451436	69512897	69451436	69512897	+	transcript2505.chr10.nnic@TSPAN15	transcript2505.chr10.nnic	protein_coding	69451436,69483691,69485141,69495594,69498209,69504438,69511791	69451690,69483876,69485215,69495689,69498396,69504485,69512897	Gene ID= ENSG00000099282.9 TPM= 2.34 Transcript Type= NA
chr10	69451436	69512897	69451436	69512897	+	transcript2506.chr10.nnic@TSPAN15	transcript2506.chr10.nnic	protein_coding	69451436,69483691,69485141,69495594,69498280,69504438,69511791	69451690,69483876,69485215,69495689,69498396,69504485,69512897	Gene ID= ENSG00000099282.9 TPM= 3.5 Transcript Type= NA
chr10	69451436	69508470	69451436	69508470	+	transcript2508.chr10.nic@TSPAN15	transcript2508.chr10.nic	protein_coding	69451436,69483691,69485141,69495594,69498280,69504438	69451690,69483876,69485215,69495689,69498396,69508470	Gene ID= ENSG00000099282.9 TPM= 5.84 Transcript Type= NA
chr10	69451495	69507669	69451495	69507669	+	transcript2511.chr10.nnic@TSPAN15	transcript2511.chr10.nnic	protein_coding	69451495,69495594,69498280,69504438,69506124,69506829	69451690,69495689,69498396,69504485,69506240,69507669	Gene ID= ENSG00000099282.9 TPM= 4.67 Transcript Type= NA
chr10	69492171	69507669	69492171	69507669	+	transcript2512.chr10.nic@TSPAN15	transcript2512.chr10.nic	protein_coding	69492171,69498280,69504438,69506124,69506829	69495689,69498396,69504485,69506240,69507669	Gene ID= ENSG00000099282.9 TPM= 9.34 Transcript Type= NA
chr10	69451473	69507669	69451473	69507669	+	ENST00000373290.6@TSPAN15	ENST00000373290.6	protein_coding	69451473,69483691,69485141,69495594,69498280,69504438,69506124,69506829	69451690,69483876,69485215,69495689,69498396,69504485,69506240,69507669	Gene ID= ENSG00000099282.9 TPM= 73.56 Transcript Type= protein_coding
chr10	69630258	69633599	69630258	69633599	+	ENST00000373279.5@C10orf35	ENST00000373279.5	protein_coding	69630258,69631480,69631709,69632790	69630313,69631547,69631839,69633599	Gene ID= ENSG00000171224.8 TPM= 12.84 Transcript Type= protein_coding
chr10	69801864	69958927	69801864	69958927	+	transcript2524.chr10.nic@COL13A1	transcript2524.chr10.nic	protein_coding	69801864,69822369,69867798,69872184,69875128,69878039,69880503,69887456,69888304,69889414,69894552,69894675,69895550,69897475,69902748,69904933,69905787,69917289,69918285,69919062,69921882,69922708,69923802,69924963,69925804,69927087,69928937,69930043,69930400,69935350,69936756,69937635,69944125,69945671,69947307,69952882,69957004,69958699	69802717,69822438,69867805,69872210,69875163,69878065,69880553,69887491,69888330,69889440,69894578,69894701,69895576,69897531,69902855,69904959,69905822,69917333,69918317,69919088,69921935,69922794,69923855,69925007,69925872,69927110,69928999,69930087,69930552,69935391,69936782,69937715,69944178,69945724,69947342,69952968,69957042,69958927	Gene ID= ENSG00000197467.13 TPM= 3.5 Transcript Type= NA
chr10	69801864	69959142	69801864	69959142	+	transcript2532.chr10.nnic@COL13A1	transcript2532.chr10.nnic	protein_coding	69801864,69822369,69867798,69872184,69875128,69878039,69880503,69887456,69888304,69889414,69894552,69894675,69895550,69902748,69904933,69905787,69917289,69918285,69919062,69921882,69922708,69923802,69924963,69925804,69927087,69928937,69930043,69930400,69935350,69936756,69937635,69944125,69945671,69947307,69952882,69957004,69958699	69802717,69822438,69867805,69872210,69875163,69878065,69880553,69887491,69888330,69889440,69894578,69894701,69895576,69902855,69904959,69905822,69917333,69918317,69919088,69921935,69922794,69923855,69925007,69925872,69927110,69928999,69930087,69930552,69935391,69936782,69937715,69944178,69945724,69947342,69952968,69957042,69959142	Gene ID= ENSG00000197467.13 TPM= 5.84 Transcript Type= NA
chr10	69870490	69872893	69870490	69872893	-	transcript2548.chr10.nnic@NA	transcript2548.chr10.nnic	NA	69870490	69872893	Gene ID= novel_gene_chr10_2549 TPM= 3.5 Transcript Type= NA
chr10	70052796	70112280	70052796	70112280	+	ENST00000373255.8@H2AFY2	ENST00000373255.8	protein_coding	70052796,70075600,70090060,70091757,70093735,70095654,70100208,70109033,70111518	70053000,70075830,70090166,70091954,70093845,70095753,70100297,70109207,70112280	Gene ID= ENSG00000099284.13 TPM= 24.52 Transcript Type= protein_coding
chr10	70110425	70132828	70110425	70132828	-	transcript2550.chr10.nnic@AIFM2	transcript2550.chr10.nnic	protein_coding	70132734,70123907,70123405,70121092,70120507,70117812,70116622,70114920,70114145,70110425	70132828,70124097,70123520,70121211,70120599,70117920,70116774,70115120,70114329,70111919	Gene ID= ENSG00000042286.14 TPM= 2.34 Transcript Type= NA
chr10	70112271	70132934	70112271	70132934	-	ENST00000307864.2@AIFM2	ENST00000307864.2	protein_coding	70132734,70123907,70123405,70121092,70120507,70117812,70116622,70114920,70112271	70132934,70124097,70123520,70121211,70120599,70117920,70116774,70115120,70114329	Gene ID= ENSG00000042286.14 TPM= 23.55 Transcript Type= protein_coding
chr10	70112271	70132888	70112271	70132888	-	transcript2563.chr10.nnic@AIFM2	transcript2563.chr10.nnic	protein_coding	70132734,70123907,70123405,70120507,70117812,70116622,70114920,70112271	70132888,70124097,70123520,70120599,70117920,70116774,70115120,70114329	Gene ID= ENSG00000042286.14 TPM= 4.87 Transcript Type= NA
chr10	70112271	70132817	70112271	70132817	-	transcript2565.chr10.nic@AIFM2	transcript2565.chr10.nic	protein_coding	70132734,70123907,70123405,70121092,70120507,70116622,70114920,70112271	70132817,70124097,70123520,70121211,70120599,70117920,70115120,70114329	Gene ID= ENSG00000042286.14 TPM= 3.12 Transcript Type= NA
chr10	70137983	70146676	70137983	70146676	-	ENST00000479086.1@TYSND1	ENST00000479086.1	protein_coding	70146533,70143842,70142668,70137983	70146676,70143972,70142853,70140141	Gene ID= ENSG00000156521.13 TPM= 5.84 Transcript Type= processed_transcript
chr10	70139208	70146659	70139208	70146659	-	transcript2572.chr10.nnic@TYSND1	transcript2572.chr10.nnic	protein_coding	70144485,70143842,70142668,70139208	70146659,70143972,70142853,70140141	Gene ID= ENSG00000156521.13 TPM= 3.5 Transcript Type= NA
chr10	70139208	70146653	70139208	70146653	-	transcript2577.chr10.nnic@TYSND1	transcript2577.chr10.nnic	protein_coding	70145421,70143842,70139208	70146653,70143972,70140141	Gene ID= ENSG00000156521.13 TPM= 3.5 Transcript Type= NA
chr10	70147289	70170523	70147289	70170523	-	ENST00000373242.6@SAR1A	ENST00000373242.6	protein_coding	70170413,70162690,70161858,70161619,70161004,70157764,70153838,70147289	70170523,70162759,70161931,70161738,70161069,70157867,70153969,70152592	Gene ID= ENSG00000079332.14 TPM= 7.01 Transcript Type= protein_coding
chr10	70150204	70170523	70150204	70170523	-	ENST00000373241.8@SAR1A	ENST00000373241.8	protein_coding	70170413,70161858,70161619,70161004,70157764,70153838,70150204	70170523,70161931,70161738,70161069,70157867,70153969,70152592	Gene ID= ENSG00000079332.14 TPM= 247.53 Transcript Type= protein_coding
chr10	70150204	70170550	70150204	70170550	-	transcript2587.chr10.nnic@SAR1A	transcript2587.chr10.nnic	protein_coding	70170476,70161858,70161619,70161004,70157764,70153838,70150204	70170550,70161931,70161738,70161069,70157867,70153969,70152592	Gene ID= ENSG00000079332.14 TPM= 18.68 Transcript Type= NA
chr10	70157962	70158768	70157962	70158768	+	transcript2592.chr10.nnic@NA	transcript2592.chr10.nnic	NA	70157962	70158768	Gene ID= novel_gene_chr10_2593 TPM= 2.34 Transcript Type= NA
chr10	70165042	70166842	70165042	70166842	+	transcript2594.chr10.nnic@NA	transcript2594.chr10.nnic	NA	70165042	70166842	Gene ID= novel_gene_chr10_2595 TPM= 7.01 Transcript Type= NA
chr10	70202830	70233427	70202830	70233427	-	ENST00000373232.7@PPA1	ENST00000373232.7	protein_coding	70233264,70230341,70218764,70217812,70214500,70213463,70209558,70209205,70206264,70204873,70202830	70233427,70230399,70218817,70217931,70214586,70213589,70209685,70209290,70206333,70204915,70203186	Gene ID= ENSG00000180817.11 TPM= 178.64 Transcript Type= protein_coding
chr10	70250451	70266388	70250451	70266388	-	transcript2602.chr10.nnic@NPFFR1	transcript2602.chr10.nnic	protein_coding	70266077,70260640,70254538,70250451	70266388,70260739,70255827,70251699	Gene ID= ENSG00000148734.7 TPM= 2.34 Transcript Type= NA
chr10	70298970	70382650	70298970	70382650	-	ENST00000395010.5@LRRC20	ENST00000395010.5	protein_coding	70382549,70340553,70323863,70298970	70382650,70340702,70324030,70301508	Gene ID= ENSG00000172731.13 TPM= 3.5 Transcript Type= protein_coding
chr10	70298973	70382589	70298973	70382589	-	ENST00000373224.5@LRRC20	ENST00000373224.5	protein_coding	70382494,70376452,70340553,70323863,70298973	70382589,70376596,70340702,70324030,70301508	Gene ID= ENSG00000172731.13 TPM= 4.67 Transcript Type= protein_coding
chr10	70298976	70382626	70298976	70382626	-	ENST00000357631.6@LRRC20	ENST00000357631.6	protein_coding	70382549,70376452,70340553,70298976	70382626,70376596,70340702,70301508	Gene ID= ENSG00000172731.13 TPM= 4.67 Transcript Type= protein_coding
chr10	70404136	70423914	70404136	70423914	+	transcript2612.chr10.nnic@EIF4EBP2	transcript2612.chr10.nnic	protein_coding	70404136,70404355,70419914,70421716	70404206,70404546,70420099,70423914	Gene ID= ENSG00000148730.6 TPM= 39.11 Transcript Type= NA
chr10	70404379	70428618	70404379	70428618	+	ENST00000373218.4@EIF4EBP2	ENST00000373218.4	protein_coding	70404379,70419914,70421716	70404546,70420099,70428618	Gene ID= ENSG00000148730.6 TPM= 52.54 Transcript Type= protein_coding
chr10	70478477	70568449	70478477	70568449	+	transcript2632.chr10.nnic@PALD1	transcript2632.chr10.nnic	protein_coding	70478477,70525923,70529229,70529889,70531290,70532621,70532995,70533922,70534425,70534739,70537811,70538280,70538892,70539092,70539676,70541102,70541463,70547306,70564364,70566581	70479059,70526136,70529331,70530068,70531454,70532781,70533070,70534073,70534524,70534843,70537906,70538408,70539008,70539247,70539762,70541242,70541534,70547446,70564519,70568449	Gene ID= ENSG00000107719.8 TPM= 2.34 Transcript Type= NA
chr10	70478821	70568449	70478821	70568449	+	transcript2634.chr10.nnic@PALD1	transcript2634.chr10.nnic	protein_coding	70478821,70525923,70529229,70529889,70531290,70532621,70532995,70533922,70534425,70534739,70537811,70538280,70538892,70539092,70539580,70541102,70541463,70547306,70564364,70566581	70479170,70526136,70529331,70530068,70531454,70532781,70533070,70534073,70534524,70534843,70537906,70538408,70539008,70539247,70539762,70541242,70541534,70547446,70564519,70568449	Gene ID= ENSG00000107719.8 TPM= 3.5 Transcript Type= NA
chr10	70494548	70568449	70494548	70568449	+	transcript2635.chr10.nnic@PALD1	transcript2635.chr10.nnic	protein_coding	70494548,70525923,70529229,70529889,70531290,70532621,70532995,70533922,70534425,70534739,70537811,70538280,70538892,70539092,70539580,70541102,70541463,70547306,70564364,70566581	70494665,70526136,70529331,70530068,70531454,70532781,70533070,70534073,70534524,70534843,70537906,70538408,70539008,70539247,70539762,70541242,70541534,70547446,70564519,70568449	Gene ID= ENSG00000107719.8 TPM= 3.5 Transcript Type= NA
chr10	70478614	70568449	70478614	70568449	+	transcript2639.chr10.nic@PALD1	transcript2639.chr10.nic	protein_coding	70478614,70525923,70529229,70529889,70531290,70532621,70532995,70533922,70534425,70534739,70537811,70538280,70538892,70539092,70541102,70541463,70547306,70564364,70566581	70479059,70526136,70529331,70530068,70531454,70532781,70533070,70534073,70534524,70534843,70537906,70538408,70539008,70539762,70541242,70541534,70547446,70564519,70568449	Gene ID= ENSG00000107719.8 TPM= 2.34 Transcript Type= NA
chr10	70478821	70568449	70478821	70568449	+	ENST00000263563.6@PALD1	ENST00000263563.6	protein_coding	70478821,70525923,70529229,70529889,70531290,70532621,70532995,70533922,70534425,70534739,70537811,70538280,70538892,70539092,70539580,70541102,70541463,70547306,70564364,70566581	70479059,70526136,70529331,70530068,70531454,70532781,70533070,70534073,70534524,70534843,70537906,70538408,70539008,70539247,70539762,70541242,70541534,70547446,70564519,70568449	Gene ID= ENSG00000107719.8 TPM= 73.56 Transcript Type= protein_coding
chr10	70597348	70601845	70597348	70601845	-	transcript2648.chr10.nic@PRF1	transcript2648.chr10.nic	protein_coding	70600364,70597348	70601845,70599181	Gene ID= ENSG00000180644.7 TPM= 19.85 Transcript Type= NA
chr10	70597348	70602759	70597348	70602759	-	ENST00000373209.2@PRF1	ENST00000373209.2	protein_coding	70602645,70600364,70597348	70602759,70600906,70599181	Gene ID= ENSG00000180644.7 TPM= 44.37 Transcript Type= protein_coding
chr10	70882280	70888621	70882280	70888621	-	transcript2654.chr10.nic@PCBD1	transcript2654.chr10.nic	protein_coding	70888531,70885798,70885152,70882280	70888621,70885929,70885232,70882485	Gene ID= ENSG00000166228.8 TPM= 5.84 Transcript Type= NA
chr10	70883510	70888784	70883510	70888784	-	ENST00000299299.3@PCBD1	ENST00000299299.3	protein_coding	70888531,70885798,70885152,70883510	70888784,70885929,70885232,70884048	Gene ID= ENSG00000166228.8 TPM= 129.6 Transcript Type= protein_coding
chr10	70882280	70885899	70882280	70885899	-	ENST00000493961.5@PCBD1	ENST00000493961.5	protein_coding	70885798,70885152,70882280	70885899,70885232,70882485	Gene ID= ENSG00000166228.8 TPM= 1.17 Transcript Type= processed_transcript
chr10	71319258	71363385	71319258	71363385	+	ENST00000373189.5@SLC29A3	ENST00000373189.5	protein_coding	71319258,71322756,71344209,71351562,71356081,71361954	71319310,71323054,71344291,71351788,71356243,71363385	Gene ID= ENSG00000198246.7 TPM= 22.77 Transcript Type= protein_coding
chr10	71319258	71363385	71319258	71363385	+	transcript2665.chr10.nnic@SLC29A3	transcript2665.chr10.nnic	protein_coding	71319258,71322756,71356081,71361954	71319310,71323054,71356243,71363385	Gene ID= ENSG00000198246.7 TPM= 6.42 Transcript Type= NA
chr10	71750312	71773586	71750312	71773586	-	transcript2673.chr10.nnic@VSIR	transcript2673.chr10.nnic	protein_coding	71773358,71761598,71760868,71755359,71752975,71751668,71750312	71773586,71761823,71760924,71755466,71753002,71751861,71751290	Gene ID= ENSG00000107738.19 TPM= 19.27 Transcript Type= NA
chr10	71747559	71773498	71747559	71773498	-	ENST00000394957.7@VSIR	ENST00000394957.7	protein_coding	71773358,71761598,71760868,71755359,71752975,71751668,71747559	71773498,71762026,71760924,71755466,71753002,71751861,71751290	Gene ID= ENSG00000107738.19 TPM= 42.62 Transcript Type= protein_coding
chr10	71816298	71851375	71816298	71851375	-	ENST00000394936.7@PSAP	ENST00000394936.7	protein_coding	71851182,71834372,71831846,71831126,71828877,71828014,71825837,71821876,71820240,71819714,71819465,71819031,71818617,71816298	71851375,71834505,71831920,71831251,71829077,71828157,71825893,71822007,71820335,71819900,71819622,71819111,71818724,71817476	Gene ID= ENSG00000197746.13 TPM= 3203.03 Transcript Type= protein_coding
chr10	72059035	72088773	72059035	72088773	-	ENST00000373109.6@SPOCK2	ENST00000373109.6	protein_coding	72088140,72072902,72072503,72072144,72070312,72068187,72067613,72066902,72064178,72063025,72059035	72088773,72072910,72072548,72072258,72070426,72068301,72067732,72067120,72064240,72063162,72062905	Gene ID= ENSG00000107742.12 TPM= 416.83 Transcript Type= protein_coding
chr10	72062406	72088526	72062406	72088526	-	ENST00000536168.2@SPOCK2	ENST00000536168.2	protein_coding	72088136,72072503,72072144,72070312,72068187,72067613,72066902,72064178,72063025,72062406	72088526,72072550,72072258,72070426,72068301,72067732,72067120,72064240,72063162,72062905	Gene ID= ENSG00000107742.12 TPM= 71.22 Transcript Type= protein_coding
chr10	72096521	72216000	72096521	72216000	-	transcript2745.chr10.nic@ASCC1	transcript2745.chr10.nic	protein_coding	72215782,72213187,72210732,72203427,72196811,72161538,72152869,72133057,72128082,72096521	72216000,72213331,72210831,72203524,72196989,72161674,72152988,72133181,72128167,72097450	Gene ID= ENSG00000138303.17 TPM= 5.84 Transcript Type= NA
chr10	72096521	72216288	72096521	72216288	-	ENST00000317168.10@ASCC1	ENST00000317168.10	protein_coding	72216207,72213187,72210732,72203427,72196811,72161538,72152869,72133057,72128082,72096521	72216288,72213331,72210831,72203524,72196989,72161674,72152988,72133181,72128167,72097450	Gene ID= ENSG00000138303.17 TPM= 12.84 Transcript Type= protein_coding
chr10	72216000	72235858	72216000	72235858	+	ENST00000621663.4@ANAPC16	ENST00000621663.4	protein_coding	72216000,72220054,72223888,72230366,72233001	72216138,72220379,72224056,72230440,72235858	Gene ID= ENSG00000166295.8 TPM= 4.67 Transcript Type= protein_coding
chr10	72216006	72235860	72216006	72235860	+	transcript2768.chr10.nnic@ANAPC16	transcript2768.chr10.nnic	protein_coding	72216006,72223888,72230366,72233001,72235329	72216138,72224056,72230440,72234118,72235860	Gene ID= ENSG00000166295.8 TPM= 7.01 Transcript Type= NA
chr10	72215997	72233829	72215997	72233829	+	transcript2773.chr10.nic@ANAPC16	transcript2773.chr10.nic	protein_coding	72215997,72223888,72230366,72233001	72216072,72224056,72230440,72233829	Gene ID= ENSG00000166295.8 TPM= 22.18 Transcript Type= NA
chr10	72215998	72233829	72215998	72233829	+	transcript2775.chr10.nnic@ANAPC16	transcript2775.chr10.nnic	protein_coding	72215998,72220054,72230366,72233001	72216138,72220379,72230440,72233829	Gene ID= ENSG00000166295.8 TPM= 7.01 Transcript Type= NA
chr10	72216029	72233829	72216029	72233829	+	transcript2783.chr10.nnic@ANAPC16	transcript2783.chr10.nnic	protein_coding	72216029,72230366,72233001	72216138,72230440,72233829	Gene ID= ENSG00000166295.8 TPM= 16.35 Transcript Type= NA
chr10	72216048	72235860	72216048	72235860	+	ENST00000299381.4@ANAPC16	ENST00000299381.4	protein_coding	72216048,72223888,72230366,72233001	72216138,72224056,72230440,72235860	Gene ID= ENSG00000166295.8 TPM= 3.5 Transcript Type= protein_coding
chr10	72223133	72233829	72223133	72233829	+	ENST00000470481.2@ANAPC16	ENST00000470481.2	protein_coding	72223133,72230366,72233001	72224056,72230440,72233829	Gene ID= ENSG00000166295.8 TPM= 5.84 Transcript Type= processed_transcript
chr10	72273920	72276036	72273920	72276036	+	ENST00000307365.3@DDIT4	ENST00000307365.3	protein_coding	72273920,72274157,72274695	72274060,72274421,72276036	Gene ID= ENSG00000168209.4 TPM= 617.66 Transcript Type= protein_coding
chr10	72332831	72355230	72332831	72355230	-	ENST00000444643.6@DNAJB12	ENST00000444643.6	protein_coding	72354765,72344950,72343366,72340985,72340789,72338202,72336524,72335780,72332831	72355230,72345127,72343511,72341170,72340868,72338311,72336696,72335931,72334617	Gene ID= ENSG00000148719.14 TPM= 50.79 Transcript Type= protein_coding
chr10	72332865	72354976	72332865	72354976	-	transcript2796.chr10.nic@DNAJB12	transcript2796.chr10.nic	protein_coding	72354765,72344950,72343366,72340985,72340789,72338202,72336524,72335834,72332865	72354976,72345127,72343511,72341170,72340868,72338311,72336696,72335931,72334617	Gene ID= ENSG00000148719.14 TPM= 23.94 Transcript Type= NA
chr10	72367327	72626191	72367327	72626191	-	ENST00000398761.8@MICU1	ENST00000398761.8	protein_coding	72626010,72566633,72562895,72551179,72533742,72508155,72477174,72475100,72423234,72407929,72375783,72367327	72626191,72566794,72563063,72551341,72533789,72508271,72477256,72475297,72423371,72408037,72375872,72368355	Gene ID= ENSG00000107745.18 TPM= 74.73 Transcript Type= protein_coding
chr10	72367340	72626105	72367340	72626105	-	ENST00000361114.9@MICU1	ENST00000361114.9	protein_coding	72626010,72566633,72562895,72551179,72533746,72508155,72477174,72475100,72423234,72407929,72375783,72367340	72626105,72566794,72563063,72551341,72533789,72508269,72477256,72475297,72423371,72408037,72375872,72368355	Gene ID= ENSG00000107745.18 TPM= 60.71 Transcript Type= protein_coding
chr10	72692131	72887694	72692131	72887694	+	ENST00000373053.7@MCU	ENST00000373053.7	protein_coding	72692131,72834359,72859177,72860423,72868703,72871377,72884266,72885745	72692301,72834428,72859347,72860527,72868863,72871580,72884382,72887694	Gene ID= ENSG00000156026.14 TPM= 57.21 Transcript Type= protein_coding
chr10	72711522	72714332	72711522	72714332	-	transcript2820.chr10.nnic@NA	transcript2820.chr10.nnic	NA	72711522	72714332	Gene ID= novel_gene_chr10_2821 TPM= 4.67 Transcript Type= NA
chr10	73007217	73096866	73007217	73096866	-	transcript2833.chr10.nnic@P4HA1	transcript2833.chr10.nnic	protein_coding	73096766,73074808,73072029,73068846,73053351,73051053,73046925,73043887,73030267,73016846,73014224,73010969,73009807,73007217	73096866,73074915,73072180,73068983,73053590,73051249,73047101,73043957,73030370,73016895,73014289,73011037,73009903,73008292	Gene ID= ENSG00000122884.12 TPM= 2.73 Transcript Type= NA
chr10	73007217	73096865	73007217	73096865	-	transcript2834.chr10.nnic@P4HA1	transcript2834.chr10.nnic	protein_coding	73096766,73074808,73073731,73072029,73068846,73053351,73051053,73046925,73030267,73016846,73014224,73010969,73009807,73007217	73096865,73074915,73073827,73072180,73068983,73053590,73051249,73047101,73030370,73016895,73014289,73011037,73009903,73008292	Gene ID= ENSG00000122884.12 TPM= 2.73 Transcript Type= NA
chr10	73007217	73096865	73007217	73096865	-	transcript2835.chr10.nic@P4HA1	transcript2835.chr10.nic	protein_coding	73096766,73074808,73073731,73072029,73068846,73053351,73051053,73046925,73044981,73030271,73014224,73010969,73009807,73007217	73096865,73074915,73073827,73072180,73068983,73053590,73051249,73047101,73045051,73030370,73014289,73011037,73009903,73008292	Gene ID= ENSG00000122884.12 TPM= 2.73 Transcript Type= NA
chr10	73007224	73096974	73007224	73096974	-	ENST00000394890.6@P4HA1	ENST00000394890.6	protein_coding	73096766,73074808,73073731,73072029,73068846,73053351,73051053,73046925,73044981,73030271,73016846,73014224,73010969,73009807,73007224	73096974,73074915,73073827,73072180,73068983,73053590,73051249,73047101,73045051,73030370,73016899,73014289,73011037,73009903,73008292	Gene ID= ENSG00000122884.12 TPM= 20.01 Transcript Type= protein_coding
chr10	73007217	73096850	73007217	73096850	-	ENST00000373008.6@P4HA1	ENST00000373008.6	protein_coding	73096766,73074808,73073731,73072029,73068846,73053351,73051053,73046925,73043887,73030267,73016846,73014224,73010969,73009807,73007217	73096850,73074915,73073827,73072180,73068983,73053590,73051249,73047101,73043957,73030370,73016895,73014289,73011037,73009903,73008292	Gene ID= ENSG00000122884.12 TPM= 9.74 Transcript Type= protein_coding
chr10	73007224	73096974	73007224	73096974	-	ENST00000263556.3@P4HA1	ENST00000263556.3	protein_coding	73096766,73074808,73073731,73072029,73068846,73053351,73051053,73046925,73043887,73030271,73016846,73014224,73010969,73009807,73007224	73096974,73074915,73073827,73072180,73068983,73053590,73051249,73047101,73043957,73030370,73016899,73014289,73011037,73009903,73008292	Gene ID= ENSG00000122884.12 TPM= 36.36 Transcript Type= protein_coding
chr10	73007217	73096850	73007217	73096850	-	ENST00000307116.6@P4HA1	ENST00000307116.6	protein_coding	73096766,73074808,73073731,73072029,73068846,73053351,73051053,73046925,73044981,73030267,73016846,73014224,73010969,73009807,73007217	73096850,73074915,73073827,73072180,73068983,73053590,73051249,73047101,73045051,73030370,73016895,73014289,73011037,73009903,73008292	Gene ID= ENSG00000122884.12 TPM= 2.73 Transcript Type= protein_coding
chr10	73133656	73168059	73133656	73168059	-	ENST00000372979.8@ECD	ENST00000372979.8	protein_coding	73167866,73163733,73160434,73156568,73156275,73154256,73152293,73148276,73146276,73139631,73139309,73138003,73136704,73133656	73168059,73163950,73160551,73156655,73156453,73154448,73152421,73148404,73146361,73139737,73139495,73138070,73136918,73134813	Gene ID= ENSG00000122882.10 TPM= 10.51 Transcript Type= protein_coding
chr10	73168121	73242181	73168121	73242181	+	transcript2854.chr10.nic@FAM149B1	transcript2854.chr10.nic	protein_coding	73168121,73174687,73177846,73192556,73193477,73208619,73210251,73228060,73230422,73232939,73234817,73239312,73240946	73168386,73174791,73177975,73192698,73193593,73208786,73210438,73228184,73230525,73233163,73234940,73239384,73242181	Gene ID= ENSG00000138286.14 TPM= 5.84 Transcript Type= NA
chr10	73168254	73231298	73168254	73231298	+	transcript2856.chr10.nic@FAM149B1	transcript2856.chr10.nic	protein_coding	73168254,73174687,73177846,73192556,73193477,73208619,73210251,73228060,73230422	73168386,73174791,73177975,73192698,73193593,73208786,73210438,73228184,73231298	Gene ID= ENSG00000138286.14 TPM= 2.34 Transcript Type= NA
chr10	73242824	73248862	73242824	73248862	-	ENST00000372950.4@DNAJC9	ENST00000372950.4	protein_coding	73247010,73246688,73245922,73243843,73242824	73248862,73246828,73246176,73243929,73243519	Gene ID= ENSG00000213551.4 TPM= 17.51 Transcript Type= protein_coding
chr10	73248843	73252693	73248843	73252693	-	ENST00000372945.7@MRPS16	ENST00000372945.7	protein_coding	73252470,73251763,73248843	73252693,73252023,73250991	Gene ID= ENSG00000182180.13 TPM= 63.05 Transcript Type= protein_coding
chr10	73248843	73252625	73248843	73252625	-	ENST00000479005.1@MRPS16	ENST00000479005.1	protein_coding	73252470,73251763,73248843	73252625,73252037,73250991	Gene ID= ENSG00000182180.13 TPM= 12.84 Transcript Type= processed_transcript
chr10	73252737	73254347	73252737	73254347	+	transcript2874.chr10.nnic@NA	transcript2874.chr10.nnic	NA	73252737	73254347	Gene ID= novel_gene_chr10_2875 TPM= 2.34 Transcript Type= NA
chr10	73375445	73414085	73375445	73414085	-	transcript2888.chr10.nic@ANXA7	transcript2888.chr10.nic	protein_coding	73414012,73398181,73397164,73396519,73388312,73387689,73383577,73383175,73380031,73379879,73378911,73375445	73414085,73398385,73397274,73396583,73388414,73387783,73383690,73383345,73380201,73379954,73379023,73376217	Gene ID= ENSG00000138279.15 TPM= 11.68 Transcript Type= NA
chr10	73375101	73414067	73375101	73414067	-	ENST00000372921.9@ANXA7	ENST00000372921.9	protein_coding	73414012,73400803,73398181,73397164,73396519,73388312,73387689,73383577,73383175,73380031,73379879,73378911,73375101	73414067,73400857,73398385,73397274,73396583,73388414,73387783,73383690,73383345,73380201,73379954,73379023,73376217	Gene ID= ENSG00000138279.15 TPM= 8.17 Transcript Type= protein_coding
chr10	73436428	73496001	73436428	73496001	-	ENST00000360663.9@PPP3CB	ENST00000360663.9	protein_coding	73495805,73479317,73478499,73474919,73471468,73471070,73470887,73470687,73467553,73454412,73446492,73444725,73439872,73436428	73496001,73479517,73478623,73475030,73471613,73471209,73470964,73470781,73467678,73454489,73446573,73444822,73439901,73438420	Gene ID= ENSG00000107758.15 TPM= 1.17 Transcript Type= protein_coding
chr10	73436806	73495617	73436806	73495617	-	transcript2900.chr10.nnic@PPP3CB	transcript2900.chr10.nnic	protein_coding	73495286,73479317,73478499,73474919,73471468,73471070,73470887,73470687,73467553,73454412,73446492,73444725,73439872,73436806	73495617,73479517,73478623,73475030,73471613,73471209,73470964,73470781,73467678,73454489,73446576,73444822,73439901,73438420	Gene ID= ENSG00000107758.15 TPM= 2.92 Transcript Type= NA
chr10	73436806	73496024	73436806	73496024	-	ENST00000394829.6@PPP3CB	ENST00000394829.6	protein_coding	73495805,73479317,73478499,73474919,73471468,73471070,73470887,73470687,73467553,73454412,73446492,73444725,73439872,73436806	73496024,73479517,73478623,73475030,73471613,73471209,73470964,73470781,73467678,73454489,73446576,73444822,73439901,73438420	Gene ID= ENSG00000107758.15 TPM= 2.92 Transcript Type= protein_coding
chr10	73436806	73496024	73436806	73496024	-	ENST00000394828.6@PPP3CB	ENST00000394828.6	protein_coding	73495805,73479317,73478499,73474919,73471468,73471070,73470887,73470687,73467553,73454412,73446492,73444725,73436806	73496024,73479517,73478623,73475030,73471613,73471209,73470964,73470781,73467678,73454489,73446576,73444822,73438420	Gene ID= ENSG00000107758.15 TPM= 4.67 Transcript Type= protein_coding
chr10	73443780	73496004	73443780	73496004	-	transcript2911.chr10.nic@PPP3CB	transcript2911.chr10.nic	protein_coding	73495805,73479317,73478499,73474919,73471468,73471070,73470887,73470687,73467553,73454412,73446492,73443780	73496004,73479517,73478623,73475030,73471613,73471209,73470964,73470781,73467678,73454489,73446576,73444822	Gene ID= ENSG00000107758.15 TPM= 2.34 Transcript Type= NA
chr10	73443780	73495996	73443780	73495996	-	ENST00000342558.3@PPP3CB	ENST00000342558.3	protein_coding	73495805,73479317,73478499,73474919,73471468,73471070,73470887,73470687,73467553,73454412,73446492,73443780	73495996,73479517,73478623,73475030,73471613,73471209,73470964,73470781,73467678,73454489,73446573,73444822	Gene ID= ENSG00000107758.15 TPM= 5.84 Transcript Type= protein_coding
chr10	73631654	73641757	73631654	73641757	-	ENST00000359322.4@MYOZ1	ENST00000359322.4	protein_coding	73641411,73639945,73637744,73634484,73633900,73631654	73641757,73640035,73637922,73634733,73634065,73632161	Gene ID= ENSG00000177791.11 TPM= 5.84 Transcript Type= protein_coding
chr10	73645530	73647373	73645530	73647373	-	transcript2953.chr10.nnic@NA	transcript2953.chr10.nnic	NA	73645530	73647373	Gene ID= novel_gene_chr10_2954 TPM= 4.67 Transcript Type= NA
chr10	73736744	73737787	73736744	73737787	+	transcript2951.chr10.nnic@NA	transcript2951.chr10.nnic	NA	73736744	73737787	Gene ID= novel_gene_chr10_2952 TPM= 2.34 Transcript Type= NA
chr10	73742995	73744230	73742995	73744230	-	ENST00000625041.1@AC022400.7	ENST00000625041.1	TEC	73742995	73744230	Gene ID= ENSG00000279088.1 TPM= 9.34 Transcript Type= TEC
chr10	73744366	73772161	73744366	73772161	+	transcript2923.chr10.nnic@SEC24C	transcript2923.chr10.nnic	protein_coding	73744366,73746805,73751108,73759622,73760018,73760713,73763490,73763856,73765451,73765800,73766086,73766350,73766760,73767054,73767837,73768810,73769007,73769347,73769615,73769836,73770280,73770709,73770955	73744437,73747004,73751243,73759794,73760386,73760849,73763601,73763983,73765589,73765915,73766210,73766541,73766853,73767170,73768007,73768906,73769152,73769485,73769733,73770015,73770393,73770798,73772161	Gene ID= ENSG00000176986.15 TPM= 11.9 Transcript Type= NA
chr10	73744366	73772161	73744366	73772161	+	transcript2927.chr10.nic@SEC24C	transcript2927.chr10.nic	protein_coding	73744366,73746805,73751108,73759622,73760018,73760713,73763490,73763856,73765451,73765800,73766086,73766350,73766760,73767054,73767837,73768810,73769007,73769347,73769615,73769836,73770955	73744437,73747004,73751243,73759794,73760386,73760849,73763601,73763983,73765589,73765915,73766210,73766541,73766853,73767170,73768007,73768906,73769152,73769485,73769733,73770798,73772161	Gene ID= ENSG00000176986.15 TPM= 10.73 Transcript Type= NA
chr10	73744366	73772161	73744366	73772161	+	transcript2928.chr10.nic@SEC24C	transcript2928.chr10.nic	protein_coding	73744366,73746805,73751108,73759622,73760018,73760713,73763490,73763856,73765451,73765800,73766086,73766350,73766760,73767054,73767837,73768810,73769007,73769615,73769836,73770280,73770955	73744437,73747004,73751243,73759794,73760386,73760849,73763601,73763983,73765589,73765915,73766210,73766541,73766853,73767170,73768007,73768906,73769485,73769733,73770015,73770798,73772161	Gene ID= ENSG00000176986.15 TPM= 11.37 Transcript Type= NA
chr10	73744384	73772161	73744384	73772161	+	ENST00000345254.8@SEC24C	ENST00000345254.8	protein_coding	73744384,73746805,73751108,73759622,73760018,73760713,73763490,73763856,73765451,73765800,73766086,73766350,73766760,73767054,73767837,73768810,73769007,73769347,73769615,73769836,73770280,73770709,73770955	73744437,73747004,73751243,73759794,73760386,73760849,73763601,73763983,73765589,73765915,73766210,73766541,73766853,73767170,73768007,73768906,73769152,73769485,73769733,73770015,73770471,73770798,73772161	Gene ID= ENSG00000176986.15 TPM= 128.07 Transcript Type= protein_coding
chr10	73744391	73772161	73744391	73772161	+	ENST00000339365.2@SEC24C	ENST00000339365.2	protein_coding	73744391,73746630,73746805,73751108,73759622,73760018,73760713,73763490,73763856,73765451,73765800,73766086,73766350,73766760,73767054,73767837,73768810,73769007,73769347,73769615,73769836,73770280,73770709,73770955	73744437,73746716,73747004,73751243,73759794,73760386,73760849,73763601,73763983,73765589,73765915,73766210,73766541,73766853,73767170,73768007,73768906,73769152,73769485,73769733,73770015,73770471,73770798,73772161	Gene ID= ENSG00000176986.15 TPM= 83.41 Transcript Type= protein_coding
chr10	73744384	73772159	73744384	73772159	+	ENST00000465076.5@SEC24C	ENST00000465076.5	protein_coding	73744384,73746805,73751108,73759622,73760018,73760713,73763490,73763856,73765451,73765800,73766086,73766350,73766760,73767054,73767837,73768810,73769007,73769347,73769615,73769836,73770280,73770955	73744437,73747004,73751243,73759794,73760386,73760849,73763601,73763983,73765589,73765915,73766210,73766541,73766853,73767170,73768007,73768906,73769152,73769485,73769733,73770015,73770798,73772159	Gene ID= ENSG00000176986.15 TPM= 25.71 Transcript Type= nonsense_mediated_decay
chr10	73772291	73776219	73772291	73776219	+	ENST00000372841.7@FUT11	ENST00000372841.7	protein_coding	73772291,73773190,73775541	73773041,73773815,73776219	Gene ID= ENSG00000196968.10 TPM= 15.18 Transcript Type= protein_coding
chr10	73778267	73780252	73778267	73780252	+	transcript2967.chr10.nnic@NA	transcript2967.chr10.nnic	NA	73778267	73780252	Gene ID= novel_gene_chr10_2968 TPM= 2.34 Transcript Type= NA
chr10	73782063	73783652	73782063	73783652	+	ENST00000372833.5@CHCHD1	ENST00000372833.5	protein_coding	73782063,73782323,73783074	73782199,73782441,73783652	Gene ID= ENSG00000172586.7 TPM= 3.5 Transcript Type= protein_coding
chr10	73785572	73801793	73785572	73801793	+	transcript2974.chr10.nic@ZSWIM8	transcript2974.chr10.nic	protein_coding	73785572,73788670,73789096,73789367,73789717,73789956,73790172,73790975,73791324,73791859,73793588,73793865,73794147,73794541,73795539,73796774,73797113,73797377,73797781,73798230,73799002,73800011,73800296,73800640,73801085,73801316	73786086,73788823,73789190,73789539,73789824,73790037,73790292,73791176,73791499,73792852,73793719,73794044,73794330,73794639,73795663,73797014,73797271,73797605,73798070,73798453,73799490,73800170,73800472,73800759,73801195,73801793	Gene ID= ENSG00000214655.10 TPM= 10.8 Transcript Type= NA
chr10	73785572	73801793	73785572	73801793	+	transcript2975.chr10.nic@ZSWIM8	transcript2975.chr10.nic	protein_coding	73785572,73788670,73789096,73789367,73789717,73789956,73790172,73790975,73791324,73791859,73793588,73793865,73794147,73794556,73795539,73796774,73797113,73797377,73797781,73798230,73799002,73800011,73800296,73800640,73801017,73801316	73786086,73788823,73789190,73789539,73789824,73790037,73790292,73791176,73791499,73792852,73793719,73794044,73794330,73794639,73795663,73797014,73797271,73797605,73798070,73798453,73799490,73800170,73800472,73800759,73801195,73801793	Gene ID= ENSG00000214655.10 TPM= 25.01 Transcript Type= NA
chr10	73785582	73801792	73785582	73801792	+	ENST00000604729.5@ZSWIM8	ENST00000604729.5	protein_coding	73785582,73788670,73789096,73789367,73789717,73789956,73790172,73790975,73791324,73791859,73793588,73793865,73794147,73794541,73795539,73796774,73797113,73797377,73797781,73798230,73799002,73800011,73800296,73800640,73801017,73801316	73786086,73788823,73789190,73789539,73789824,73790037,73790292,73791176,73791499,73792852,73793719,73794044,73794330,73794639,73795663,73797014,73797271,73797605,73798070,73798453,73799490,73800170,73800472,73800759,73801195,73801792	Gene ID= ENSG00000214655.10 TPM= 18 Transcript Type= protein_coding
chr10	73785662	73801792	73785662	73801792	+	ENST00000605216.5@ZSWIM8	ENST00000605216.5	protein_coding	73785662,73788670,73789096,73789367,73789717,73789956,73790172,73790975,73791324,73791859,73793588,73793865,73794147,73794556,73795539,73796774,73797113,73797377,73797781,73798230,73799002,73800011,73800296,73800640,73801017,73801316	73786086,73788823,73789190,73789539,73789824,73790037,73790292,73791176,73791499,73792852,73793719,73794044,73794330,73794639,73795663,73797014,73797271,73797605,73798070,73798453,73799490,73800194,73800472,73800759,73801195,73801792	Gene ID= ENSG00000214655.10 TPM= 11.58 Transcript Type= protein_coding
chr10	73801911	73811846	73801911	73811846	-	transcript2998.chr10.nnic@NDST2	transcript2998.chr10.nnic	protein_coding	73811474,73810799,73807384,73807108,73806657,73806289,73805900,73805587,73804773,73803893,73803574,73803189,73802972,73802674,73801911	73811846,73810903,73808729,73807195,73806831,73806474,73806028,73805769,73804869,73804016,73803748,73803359,73803081,73802776,73802576	Gene ID= ENSG00000166507.17 TPM= 3.3 Transcript Type= NA
chr10	73801911	73811794	73801911	73811794	-	transcript3000.chr10.nic@NDST2	transcript3000.chr10.nic	protein_coding	73811474,73810799,73807384,73807108,73806657,73806289,73805900,73805587,73804773,73803893,73803574,73803189,73803009,73802674,73801911	73811794,73810903,73808729,73807195,73806811,73806474,73806028,73805769,73804869,73804016,73803748,73803359,73803081,73802776,73802576	Gene ID= ENSG00000166507.17 TPM= 4.29 Transcript Type= NA
chr10	73801911	73809112	73801911	73809112	-	transcript3001.chr10.nic@NDST2	transcript3001.chr10.nic	protein_coding	73808813,73807384,73807108,73806657,73806289,73805900,73805587,73804773,73803893,73803574,73803189,73802972,73802674,73801911	73809112,73808729,73807195,73806811,73806474,73806028,73805769,73804869,73804016,73803748,73803359,73803081,73802776,73802576	Gene ID= ENSG00000166507.17 TPM= 11.48 Transcript Type= NA
chr10	73801911	73811846	73801911	73811846	-	transcript3002.chr10.nic@NDST2	transcript3002.chr10.nic	protein_coding	73811474,73810799,73807384,73806657,73806289,73805900,73805587,73804773,73803893,73803574,73803189,73802972,73802674,73801911	73811846,73810903,73808729,73807195,73806474,73806028,73805769,73804869,73804016,73803748,73803359,73803081,73802776,73802576	Gene ID= ENSG00000166507.17 TPM= 4.47 Transcript Type= NA
chr10	73801911	73811584	73801911	73811584	-	ENST00000309979.10@NDST2	ENST00000309979.10	protein_coding	73811474,73810799,73807384,73807108,73806657,73806289,73805900,73805587,73804773,73803893,73803574,73803189,73802972,73802674,73801911	73811584,73810903,73808729,73807195,73806811,73806474,73806028,73805769,73804869,73804016,73803748,73803359,73803081,73802776,73802576	Gene ID= ENSG00000166507.17 TPM= 9.14 Transcript Type= protein_coding
chr10	73810684	73811798	73810684	73811798	-	ENST00000398701.2@NDST2	ENST00000398701.2	protein_coding	73811474,73810684	73811798,73810903	Gene ID= ENSG00000166507.17 TPM= 1.17 Transcript Type= processed_transcript
chr10	73812501	73874591	73812501	73874591	-	ENST00000322680.7@CAMK2G	ENST00000322680.7	protein_coding	73874397,73872989,73860830,73853192,73852254,73849261,73849013,73848526,73847988,73847225,73842458,73842169,73837468,73825279,73824040,73821682,73819532,73817479,73817023,73815003,73812501	73874591,73873083,73860889,73853246,73852319,73849333,73849115,73848609,73848082,73847347,73842541,73842211,73837511,73825347,73824084,73821730,73819645,73817554,73817117,73815247,73814505	Gene ID= ENSG00000148660.20 TPM= 3.12 Transcript Type= protein_coding
chr10	73812501	73874591	73812501	73874591	-	transcript2986.chr10.nic@CAMK2G	transcript2986.chr10.nic	protein_coding	73874397,73872989,73860830,73853192,73852254,73849261,73849013,73848526,73847988,73847225,73842458,73842169,73837468,73825279,73824040,73821682,73817479,73817023,73815003,73812501	73874591,73873083,73860889,73853246,73852319,73849333,73849115,73848609,73848082,73847347,73842541,73842211,73837511,73825347,73824084,73821730,73817554,73817117,73815247,73814505	Gene ID= ENSG00000148660.20 TPM= 6.62 Transcript Type= NA
chr10	73814288	73874591	73814288	73874591	-	transcript2988.chr10.nic@CAMK2G	transcript2988.chr10.nic	protein_coding	73874397,73872989,73860830,73853192,73852254,73849261,73849013,73848526,73847988,73847225,73842458,73842169,73837468,73824040,73821682,73819532,73817479,73817023,73815003,73814288	73874591,73873083,73860889,73853246,73852319,73849333,73849115,73848609,73848082,73847347,73842541,73842211,73837511,73824084,73821730,73819645,73817554,73817117,73815247,73814505	Gene ID= ENSG00000148660.20 TPM= 2.34 Transcript Type= NA
chr10	73820664	73824557	73820664	73824557	-	transcript3016.chr10.nic@CAMK2G	transcript3016.chr10.nic	protein_coding	73824040,73820664	73824557,73821730	Gene ID= ENSG00000148660.20 TPM= 3.5 Transcript Type= NA
chr10	73812501	73874519	73812501	73874519	-	ENST00000351293.7@CAMK2G	ENST00000351293.7	protein_coding	73874397,73872989,73860830,73853192,73852254,73849261,73849013,73848526,73847988,73847225,73842458,73842169,73837468,73824040,73821682,73817479,73817023,73815003,73812501	73874519,73873083,73860889,73853246,73852319,73849333,73849115,73848609,73848082,73847347,73842541,73842211,73837511,73824084,73821730,73817554,73817117,73815247,73814505	Gene ID= ENSG00000148660.20 TPM= 3.12 Transcript Type= protein_coding
chr10	73911291	73917496	73911291	73917496	+	transcript3019.chr10.nic@PLAU	transcript3019.chr10.nic	protein_coding	73911291,73912041,73912215,73912924,73913290,73913539,73913980,73914776,73915251,73916389	73911612,73912068,73912322,73913098,73913381,73913758,73914128,73914916,73915399,73917496	Gene ID= ENSG00000122861.15 TPM= 7.01 Transcript Type= NA
chr10	73911157	73917497	73911157	73917497	+	ENST00000372764.3@PLAU	ENST00000372764.3	protein_coding	73911157,73911525,73912041,73912215,73912924,73913290,73913539,73913980,73914776,73915251,73916389	73911218,73911612,73912068,73912322,73913098,73913381,73913758,73914128,73914916,73915399,73917497	Gene ID= ENSG00000122861.15 TPM= 26.85 Transcript Type= protein_coding
chr10	73998114	74120160	73998114	74120160	+	ENST00000211998.9@VCL	ENST00000211998.9	protein_coding	73998114,74043083,74070670,74070975,74072730,74074743,74082454,74083366,74089196,74090023,74094271,74095656,74097204,74100948,74103820,74105051,74107230,74108971,74111909,74114184,74114795,74118023	73998375,74043153,74070820,74071083,74072852,74074903,74082544,74083513,74089349,74090198,74094461,74095855,74097332,74101097,74103928,74105353,74107354,74109156,74112112,74114387,74114899,74120160	Gene ID= ENSG00000035403.17 TPM= 67.72 Transcript Type= protein_coding
chr10	74122964	74150842	74122964	74150842	-	ENST00000372745.1@AP3M1	ENST00000372745.1	protein_coding	74150755,74138806,74138107,74136632,74134027,74129907,74129108,74126148,74124380,74122964	74150842,74138931,74138382,74136803,74134164,74129992,74129241,74126355,74124524,74123910	Gene ID= ENSG00000185009.12 TPM= 2.34 Transcript Type= protein_coding
chr10	74230048	74232848	74230048	74232848	-	transcript3063.chr10.nnic@NA	transcript3063.chr10.nnic	NA	74230048	74232848	Gene ID= novel_gene_chr10_3064 TPM= 4.67 Transcript Type= NA
chr10	74235130	74238161	74235130	74238161	-	transcript3065.chr10.nnic@NA	transcript3065.chr10.nnic	NA	74235130	74238161	Gene ID= novel_gene_chr10_3066 TPM= 3.5 Transcript Type= NA
chr10	74422645	74422755	74422645	74422755	-	transcript3067.chr10.nnic@NA	transcript3067.chr10.nnic	NA	74422645	74422755	Gene ID= novel_gene_chr10_3068 TPM= 2.34 Transcript Type= NA
chr10	74849943	74853412	74849943	74853412	-	transcript3075.chr10.nnic@NA	transcript3075.chr10.nnic	NA	74849943	74853412	Gene ID= novel_gene_chr10_3076 TPM= 4.67 Transcript Type= NA
chr10	75111471	75176831	75111471	75176831	+	ENST00000372690.7@SAMD8	ENST00000372690.7	protein_coding	75111471,75150514,75164645,75168541,75176066,75176388	75111722,75151106,75164740,75168658,75176216,75176831	Gene ID= ENSG00000156671.12 TPM= 2.34 Transcript Type= protein_coding
chr10	75111511	75182123	75111511	75182123	+	transcript3084.chr10.nic@SAMD8	transcript3084.chr10.nic	protein_coding	75111511,75150514,75164645,75168541,75176066,75176388	75111778,75151106,75164740,75168658,75176216,75182123	Gene ID= ENSG00000156671.12 TPM= 7.59 Transcript Type= NA
chr10	75111635	75182123	75111635	75182123	+	ENST00000542569.5@SAMD8	ENST00000542569.5	protein_coding	75111635,75150514,75164645,75168541,75176066,75176388	75111722,75151106,75164740,75168658,75176216,75182123	Gene ID= ENSG00000156671.12 TPM= 11.09 Transcript Type= protein_coding
chr10	75210751	75231448	75210751	75231448	+	ENST00000332211.10@VDAC2	ENST00000332211.10	protein_coding	75210751,75211134,75212230,75214021,75219063,75219304,75220743,75222252,75229644,75230898	75210938,75211189,75212298,75214070,75219215,75219356,75220970,75222402,75229701,75231448	Gene ID= ENSG00000165637.13 TPM= 214.84 Transcript Type= protein_coding
chr10	75229868	75230540	75229868	75230540	-	transcript3099.chr10.nnic@NA	transcript3099.chr10.nnic	NA	75229868	75230540	Gene ID= novel_gene_chr10_3100 TPM= 2.34 Transcript Type= NA
chr10	75232742	75234562	75232742	75234562	-	transcript3116.chr10.nnic@NA	transcript3116.chr10.nnic	NA	75232742	75234562	Gene ID= novel_gene_chr10_3117 TPM= 4.67 Transcript Type= NA
chr10	75233971	75235954	75233971	75235954	-	transcript3102.chr10.nnic@COMTD1	transcript3102.chr10.nnic	protein_coding	75235835,75235417,75235060,75234938,75234610,75233971	75235954,75235743,75235178,75234992,75234743,75234225	Gene ID= ENSG00000165644.10 TPM= 5.25 Transcript Type= NA
chr10	75233971	75236047	75233971	75236047	-	transcript3112.chr10.nic@COMTD1	transcript3112.chr10.nic	protein_coding	75234610,75233971	75236047,75234225	Gene ID= ENSG00000165644.10 TPM= 3.5 Transcript Type= NA
chr10	75233969	75236011	75233969	75236011	-	ENST00000372538.7@COMTD1	ENST00000372538.7	protein_coding	75235835,75235616,75235267,75235060,75234938,75234610,75233969	75236011,75235743,75235372,75235178,75234992,75234743,75234225	Gene ID= ENSG00000165644.10 TPM= 11.09 Transcript Type= protein_coding
chr10	75397830	75401906	75397830	75401906	-	ENST00000372524.4@ZNF503	ENST00000372524.4	protein_coding	75401105,75397830	75401906,75400374	Gene ID= ENSG00000165655.16 TPM= 30.36 Transcript Type= protein_coding
chr10	75431450	75441041	75431450	75441041	+	transcript3129.chr10.nic@LRMDA	transcript3129.chr10.nic	protein_coding	75431450,75438394	75431754,75441041	Gene ID= ENSG00000148655.14 TPM= 3.5 Transcript Type= NA
chr10	75514166	75516651	75514166	75516651	-	transcript3130.chr10.nnic@NA	transcript3130.chr10.nnic	NA	75514166	75516651	Gene ID= novel_gene_chr10_3131 TPM= 2.34 Transcript Type= NA
chr10	75715451	75718170	75715451	75718170	-	transcript3132.chr10.nnic@NA	transcript3132.chr10.nnic	NA	75715451	75718170	Gene ID= novel_gene_chr10_3133 TPM= 2.34 Transcript Type= NA
chr10	76884869	77637902	76884869	77637902	-	ENST00000286627.10@KCNMA1	ENST00000286627.10	protein_coding	77637265,77403862,77251195,77184823,77183421,77120973,77112367,77110173,77108481,77090400,77086488,77084637,77079481,77073097,77039528,77027823,77019013,77011967,76969974,76953801,76949142,76944773,76914936,76909966,76891525,76889451,76884869	77637902,77404023,77251256,77184916,77183532,77121048,77112442,77110343,77108572,77090510,77086593,77084719,77079550,77073252,77039637,77027891,77019099,77012043,76970067,76953924,76949366,76944965,76915049,76910096,76891719,76889569,76887515	Gene ID= ENSG00000156113.22 TPM= 16.35 Transcript Type= protein_coding
chr10	77012199	77404025	77012199	77404025	-	transcript3142.chr10.nic@KCNMA1	transcript3142.chr10.nic	protein_coding	77403862,77251195,77184823,77183421,77120973,77112367,77110173,77108481,77090400,77086488,77084637,77079481,77073097,77039528,77027823,77019013,77012199	77404025,77251256,77184916,77183532,77121048,77112442,77110343,77108572,77090510,77086593,77084719,77079550,77073252,77039637,77027891,77019099,77012557	Gene ID= ENSG00000156113.22 TPM= 5.84 Transcript Type= NA
chr10	76995429	77000856	76995429	77000856	+	transcript3143.chr10.nnic@NA	transcript3143.chr10.nnic	NA	76995429	77000856	Gene ID= novel_gene_chr10_3144 TPM= 4.67 Transcript Type= NA
chr10	77636204	77637938	77636204	77637938	-	transcript3149.chr10.nnic@NA	transcript3149.chr10.nnic	NA	77636204	77637938	Gene ID= novel_gene_chr10_3150 TPM= 3.5 Transcript Type= NA
chr10	77790791	77926526	77790791	77926526	-	ENST00000372391.6@DLG5	ENST00000372391.6	protein_coding	77926217,77869129,77856730,77854227,77853354,77843447,77841881,77835738,77833914,77830741,77830217,77829355,77828882,77824384,77821082,77819895,77819321,77817777,77817007,77816551,77812215,77811924,77811094,77809547,77807796,77806758,77805665,77796451,77796061,77794849,77794008,77790791	77926526,77869197,77856892,77854370,77853537,77843706,77842193,77835922,77834039,77830873,77830344,77829530,77828985,77824476,77822101,77820018,77819465,77817889,77817096,77816701,77812377,77812057,77811234,77809730,77807944,77806928,77805861,77796594,77796188,77794958,77794117,77792543	Gene ID= ENSG00000151208.16 TPM= 18.68 Transcript Type= protein_coding
chr10	77975149	78029545	77975149	78029545	-	ENST00000372371.7@POLR3A	ENST00000372371.7	protein_coding	78029364,78026094,78025622,78024971,78024549,78022145,78021860,78021546,78019162,78017575,78013650,78010471,78009864,78009537,78007702,78004716,78002197,78000976,77999981,77993197,77991054,77986073,77985903,77985170,77984205,77983920,77982653,77982154,77981428,77980141,77975149	78029545,78026229,78025759,78025142,78024703,78022384,78022022,78021682,78019265,78017716,78013790,78010540,78009991,78009675,78007866,78004888,78002308,78001094,78000118,77993367,77991167,77986159,77985985,77985340,77984298,77984012,77982817,77982318,77981559,77980273,77977626	Gene ID= ENSG00000148606.12 TPM= 8.17 Transcript Type= protein_coding
chr10	78033760	78040713	78033760	78040713	+	ENST00000435275.5@RPS24	ENST00000435275.5	protein_coding	78033760,78035352,78035511,78037194,78040201,78040615	78033904,78035417,78035720,78037304,78040225,78040713	Gene ID= ENSG00000138326.18 TPM= 151.4 Transcript Type= protein_coding
chr10	78033865	78040697	78033865	78040697	+	ENST00000372360.7@RPS24	ENST00000372360.7	protein_coding	78033865,78035352,78035511,78037194,78040615	78033904,78035417,78035720,78037304,78040697	Gene ID= ENSG00000138326.18 TPM= 15.96 Transcript Type= protein_coding
chr10	78033883	78040697	78033883	78040697	+	ENST00000360830.8@RPS24	ENST00000360830.8	protein_coding	78033883,78035352,78035511,78037194,78040204,78040615	78033904,78035417,78035720,78037304,78040225,78040697	Gene ID= ENSG00000138326.18 TPM= 33.47 Transcript Type= protein_coding
chr10	78037904	78038789	78037904	78038789	-	transcript3163.chr10.nnic@NA	transcript3163.chr10.nnic	NA	78037904	78038789	Gene ID= novel_gene_chr10_3164 TPM= 8.17 Transcript Type= NA
chr10	78248748	78252645	78248748	78252645	+	ENST00000434974.1@LINC00595	ENST00000434974.1	lincRNA	78248748,78250277	78249070,78252645	Gene ID= ENSG00000230417.11 TPM= 1.17 Transcript Type= lincRNA
chr10	79068932	79217526	79068932	79217526	+	transcript3167.chr10.nic@ZMIZ1	transcript3167.chr10.nic	protein_coding	79068932,79118915,79139682,79162053,79201584,79208336,79216169	79069270,79119024,79139777,79162133,79201692,79208449,79217526	Gene ID= ENSG00000108175.16 TPM= 3.5 Transcript Type= NA
chr10	79069035	79316519	79069035	79316519	+	ENST00000334512.9@ZMIZ1	ENST00000334512.9	protein_coding	79069035,79118915,79139682,79162053,79201584,79208336,79216169,79277181,79289775,79290959,79292158,79293381,79296471,79297613,79298406,79299050,79300732,79302107,79304015,79305164,79305533,79306100,79307405,79310924,79312642	79069270,79119024,79139777,79162133,79201692,79208449,79216274,79277325,79289889,79291176,79292356,79293653,79296653,79297690,79298580,79299191,79300942,79302212,79304175,79305231,79305601,79306344,79307571,79311184,79316519	Gene ID= ENSG00000108175.16 TPM= 81.73 Transcript Type= protein_coding
chr10	79078721	79081012	79078721	79081012	-	transcript3177.chr10.nnic@NA	transcript3177.chr10.nnic	NA	79078721	79081012	Gene ID= novel_gene_chr10_3178 TPM= 7.01 Transcript Type= NA
chr10	79280649	79284200	79280649	79284200	-	transcript3179.chr10.nnic@NA	transcript3179.chr10.nnic	NA	79280649	79284200	Gene ID= novel_gene_chr10_3180 TPM= 5.84 Transcript Type= NA
chr10	79347458	79354717	79347458	79354717	+	transcript3188.chr10.nic@PPIF	transcript3188.chr10.nic	protein_coding	79347458,79349076,79349665,79352317,79353707	79347743,79349106,79351583,79352392,79354717	Gene ID= ENSG00000108179.13 TPM= 3.5 Transcript Type= NA
chr10	79347478	79355337	79347478	79355337	+	ENST00000225174.7@PPIF	ENST00000225174.7	protein_coding	79347478,79349076,79349665,79351487,79352317,79353707	79347743,79349106,79349753,79351583,79352392,79355337	Gene ID= ENSG00000108179.13 TPM= 22.18 Transcript Type= protein_coding
chr10	79382325	79445627	79382325	79445627	-	ENST00000372336.3@ZCCHC24	ENST00000372336.3	protein_coding	79445195,79432558,79394276,79382325	79445627,79432758,79394440,79386458	Gene ID= ENSG00000165424.6 TPM= 26.85 Transcript Type= protein_coding
chr10	79555869	79614504	79555869	79614504	-	transcript3576.chr10.nnic@SFTPA2	transcript3576.chr10.nnic	protein_coding	79614442,79594884,79555869	79614504,79595015,79556911	Gene ID= ENSG00000185303.16 TPM= 5.84 Transcript Type= NA
chr10	79555884	79614313	79555884	79614313	-	transcript3589.chr10.nnic@SFTPA2	transcript3589.chr10.nnic	protein_coding	79614180,79595065,79555884	79614313,79595265,79557105	Gene ID= ENSG00000185303.16 TPM= 3.5 Transcript Type= NA
chr10	79555885	79614804	79555885	79614804	-	transcript3591.chr10.nnic@SFTPA2	transcript3591.chr10.nnic	protein_coding	79614572,79594578,79555885	79614804,79594901,79556507	Gene ID= ENSG00000185303.16 TPM= 5.84 Transcript Type= NA
chr10	79555852	79560395	79555852	79560395	-	ENST00000372325.6@SFTPA2	ENST00000372325.6	protein_coding	79560364,79559969,79559312,79558886,79558052,79555852	79560395,79559998,79559506,79559005,79558129,79557585	Gene ID= ENSG00000185303.16 TPM= 15613.9 Transcript Type= protein_coding
chr10	79610945	79615455	79610945	79615455	+	ENST00000419470.6@SFTPA1	ENST00000419470.6	protein_coding	79610945,79611582,79611803,79612312,79613189,79613737	79610982,79611641,79611997,79612431,79613266,79615455	Gene ID= ENSG00000122852.14 TPM= 852.8 Transcript Type= protein_coding
chr10	79610939	79615440	79610939	79615440	+	ENST00000398636.7@SFTPA1	ENST00000398636.7	protein_coding	79610939,79611319,79611803,79612312,79613189,79613737	79610982,79611389,79611997,79612431,79613266,79615440	Gene ID= ENSG00000122852.14 TPM= 4219.42 Transcript Type= protein_coding
chr10	79610939	79615440	79610939	79615440	+	transcript3456.chr10.nnic@SFTPA1	transcript3456.chr10.nnic	protein_coding	79610939,79611803,79612312,79613189,79613737	79611138,79611997,79612431,79613266,79615440	Gene ID= ENSG00000122852.14 TPM= 924.4 Transcript Type= NA
chr10	79610939	79615440	79610939	79615440	+	ENST00000428376.6@SFTPA1	ENST00000428376.6	protein_coding	79610939,79611803,79612312,79613189,79613737	79610982,79611997,79612431,79613266,79615440	Gene ID= ENSG00000122852.14 TPM= 11715.19 Transcript Type= protein_coding
chr10	79556994	79615418	79556994	79615418	+	transcript3634.chr10.nnic@SFTPA1	transcript3634.chr10.nnic	protein_coding	79556994,79613948	79557195,79615418	Gene ID= ENSG00000122852.14 TPM= 88 Transcript Type= NA
chr10	79610953	79613840	79610953	79613840	+	ENST00000429958.5@SFTPA1	ENST00000429958.5	protein_coding	79610953,79611803,79612312,79613189,79613737	79610982,79611997,79612431,79613266,79613840	Gene ID= ENSG00000122852.14 TPM= 1.17 Transcript Type= protein_coding
chr10	79691502	79826516	79691502	79826516	-	ENST00000601369.5@NUTM2B-AS1	ENST00000601369.5	antisense_RNA	79826198,79814613,79808759,79806039,79804485,79766271,79691502	79826516,79814716,79808832,79806122,79804527,79766324,79692056	Gene ID= ENSG00000225484.6 TPM= 4.67 Transcript Type= antisense_RNA
chr10	79718951	79722440	79718951	79722440	-	transcript3760.chr10.nnic@NA	transcript3760.chr10.nnic	NA	79718951	79722440	Gene ID= novel_gene_chr10_3761 TPM= 2.34 Transcript Type= NA
chr10	79825902	79827602	79825902	79827602	+	ENST00000605920.1@AL135925.1	ENST00000605920.1	lincRNA	79825902	79827602	Gene ID= ENSG00000272447.1 TPM= 25.69 Transcript Type= lincRNA
chr10	79904689	79914421	79904689	79914421	+	transcript3788.chr10.nic@AL512662.2	transcript3788.chr10.nic	processed_transcript	79904689,79906572,79907668	79905049,79906780,79914421	Gene ID= ENSG00000283913.1 TPM= 8.17 Transcript Type= NA
chr10	79937740	79949103	79937740	79949103	-	ENST00000372292.7@SFTPD	ENST00000372292.7	protein_coding	79949066,79946461,79942763,79942388,79941954,79941398,79940705,79937740	79949103,79946662,79942879,79942504,79942070,79941514,79940788,79938228	Gene ID= ENSG00000133661.15 TPM= 1175.98 Transcript Type= protein_coding
chr10	80078646	80092550	80078646	80092550	+	ENST00000613758.4@TMEM254	ENST00000613758.4	protein_coding	80078646,80081640,80081841,80082145,80090797	80078786,80081734,80081944,80082204,80092550	Gene ID= ENSG00000133678.13 TPM= 2.34 Transcript Type= protein_coding
chr10	80078670	80092557	80078670	80092557	+	ENST00000372281.7@TMEM254	ENST00000372281.7	protein_coding	80078670,80081841,80082145,80090797	80078786,80081944,80082204,80092557	Gene ID= ENSG00000133678.13 TPM= 19.85 Transcript Type= protein_coding
chr10	80079270	80092557	80079270	80092557	+	ENST00000467529.5@TMEM254	ENST00000467529.5	protein_coding	80079270,80081841,80082145,80090797	80079307,80081944,80082204,80092557	Gene ID= ENSG00000133678.13 TPM= 10.51 Transcript Type= processed_transcript
chr10	80132721	80145359	80132721	80145359	+	ENST00000372263.3@PLAC9	ENST00000372263.3	protein_coding	80132721,80142082,80144223,80144900	80132826,80142179,80144343,80145359	Gene ID= ENSG00000189129.13 TPM= 7.01 Transcript Type= protein_coding
chr10	80155544	80205583	80155544	80205583	-	transcript3811.chr10.nic@ANXA11	transcript3811.chr10.nic	protein_coding	80205343,80180941,80176107,80172807,80170800,80168969,80167226,80166890,80166084,80164053,80163534,80163349,80161935,80159100,80157967,80157641,80155544	80205583,80181455,80176155,80172869,80170915,80169358,80167313,80166984,80166197,80164143,80163613,80163405,80162028,80159195,80158025,80157763,80155912	Gene ID= ENSG00000122359.17 TPM= 68.55 Transcript Type= NA
chr10	80150889	80205572	80150889	80205572	-	ENST00000372231.7@ANXA11	ENST00000372231.7	protein_coding	80205343,80172807,80170800,80168969,80167226,80166890,80166084,80164053,80163534,80163349,80161935,80159100,80157967,80157641,80150889	80205572,80172869,80170915,80169358,80167313,80166984,80166197,80164143,80163613,80163405,80162028,80159195,80158025,80157763,80155912	Gene ID= ENSG00000122359.17 TPM= 17.88 Transcript Type= protein_coding
chr10	80155124	80205572	80155124	80205572	-	ENST00000422982.7@ANXA11	ENST00000422982.7	protein_coding	80205343,80176107,80172807,80170800,80168969,80167226,80166890,80166084,80164053,80163534,80163349,80161935,80159100,80157967,80157641,80155124	80205572,80176155,80172869,80170915,80169358,80167313,80166984,80166197,80164143,80163613,80163405,80162028,80159195,80158025,80157763,80155912	Gene ID= ENSG00000122359.17 TPM= 20.21 Transcript Type= protein_coding
chr10	80408494	80432997	80408494	80432997	+	ENST00000372185.5@FAM213A	ENST00000372185.5	protein_coding	80408494,80420483,80422417,80425866,80427332,80431986	80408643,80420645,80422508,80426006,80427496,80432997	Gene ID= ENSG00000122378.13 TPM= 38.53 Transcript Type= protein_coding
chr10	80454276	80519628	80454276	80519628	+	transcript3861.chr10.nnic@TSPAN14	transcript3861.chr10.nnic	protein_coding	80454276,80468547,80489217,80504728,80507228,80509301,80512144,80514019,80516204,80517905	80454371,80468687,80489314,80504778,80507374,80509471,80512269,80514063,80516323,80519628	Gene ID= ENSG00000108219.14 TPM= 62.08 Transcript Type= NA
chr10	80454307	80519628	80454307	80519628	+	transcript3862.chr10.nnic@TSPAN14	transcript3862.chr10.nnic	protein_coding	80454307,80463088,80489217,80504728,80507228,80509301,80512144,80514019,80516204,80517905	80454371,80463127,80489314,80504778,80507374,80509471,80512269,80514063,80516323,80519628	Gene ID= ENSG00000108219.14 TPM= 22.38 Transcript Type= NA
chr10	80454201	80510270	80454201	80510270	+	transcript3872.chr10.nnic@TSPAN14	transcript3872.chr10.nnic	protein_coding	80454201,80468547,80489217,80504728,80507228,80509301	80454371,80468687,80489314,80504778,80507374,80510270	Gene ID= ENSG00000108219.14 TPM= 4.67 Transcript Type= NA
chr10	80468720	80473054	80468720	80473054	-	transcript3879.chr10.nnic@NA	transcript3879.chr10.nnic	NA	80468720	80473054	Gene ID= novel_gene_chr10_3880 TPM= 7.01 Transcript Type= NA
chr10	80519067	80521070	80519067	80521070	+	transcript3875.chr10.nnic@NA	transcript3875.chr10.nnic	NA	80519067	80521070	Gene ID= novel_gene_chr10_3876 TPM= 23.35 Transcript Type= NA
chr10	84139440	84153245	84139440	84153245	+	ENST00000372134.5@GHITM	ENST00000372134.5	protein_coding	84139440,84141462,84142655,84143995,84144875,84148730,84150055,84150709,84152264	84139593,84141629,84142754,84144106,84145016,84148838,84150243,84150880,84153245	Gene ID= ENSG00000165678.20 TPM= 74.73 Transcript Type= protein_coding
chr10	84328592	84470425	84328592	84470425	+	transcript3899.chr10.nnic@CCSER2	transcript3899.chr10.nnic	protein_coding	84328592,84341370,84371014,84373619,84417771,84425731,84438512,84463933,84470372	84328808,84341509,84372469,84373815,84417861,84425893,84438707,84464016,84470425	Gene ID= ENSG00000107771.15 TPM= 3.5 Transcript Type= NA
chr10	84328571	84470425	84328571	84470425	+	transcript3900.chr10.nic@CCSER2	transcript3900.chr10.nic	protein_coding	84328571,84371014,84373619,84417771,84425731,84438512,84463933,84470372	84328808,84372469,84373815,84417861,84425893,84438707,84464016,84470425	Gene ID= ENSG00000107771.15 TPM= 22.57 Transcript Type= NA
chr10	84424928	84429759	84424928	84429759	+	transcript3910.chr10.nic@CCSER2	transcript3910.chr10.nic	protein_coding	84424928,84425731	84425048,84429759	Gene ID= ENSG00000107771.15 TPM= 2.34 Transcript Type= NA
chr10	84328586	84374005	84328586	84374005	+	ENST00000359979.8@CCSER2	ENST00000359979.8	protein_coding	84328586,84371014,84373619	84328808,84372469,84374005	Gene ID= ENSG00000107771.15 TPM= 2.72 Transcript Type= protein_coding
chr10	84328589	84518521	84328589	84518521	+	ENST00000372088.6@CCSER2	ENST00000372088.6	protein_coding	84328589,84371014,84373619,84417771,84425731,84438512,84463933,84470372,84477575,84513449	84328808,84372469,84373815,84417861,84425893,84438707,84464016,84470458,84477664,84518521	Gene ID= ENSG00000107771.15 TPM= 12.65 Transcript Type= protein_coding
chr10	84424939	84518521	84424939	84518521	+	ENST00000543283.2@CCSER2	ENST00000543283.2	protein_coding	84424939,84425731,84438512,84463933,84470372,84477575,84499875,84513449	84425048,84425893,84438707,84464016,84470458,84477664,84499959,84518521	Gene ID= ENSG00000107771.15 TPM= 6.42 Transcript Type= protein_coding
chr10	85599555	86366478	85599555	86366478	-	ENST00000327946.11@GRID1	ENST00000327946.11	protein_coding	86366314,86363941,86206364,86138819,85916186,85869010,85856029,85854496,85729513,85727855,85724352,85723003,85647202,85619867,85613407,85599555	86366478,86364096,86206648,86139024,85916239,85869180,85856190,85854615,85729614,85728052,85724676,85723141,85647397,85620033,85613647,85602701	Gene ID= ENSG00000182771.18 TPM= 3.5 Transcript Type= protein_coding
chr10	86435256	86521829	86435256	86521829	-	transcript3915.chr10.nnic@WAPL	transcript3915.chr10.nnic	protein_coding	86521365,86517571,86499718,86497201,86473878,86472612,86472208,86470992,86467279,86461176,86460399,86458989,86453656,86453220,86451967,86446242,86443275,86437920,86435256	86521829,86518091,86500743,86497301,86473973,86472764,86472344,86471103,86467506,86461287,86460496,86459065,86453831,86453335,86452131,86446449,86443363,86438015,86437608	Gene ID= ENSG00000062650.18 TPM= 7.79 Transcript Type= NA
chr10	86435256	86521829	86435256	86521829	-	transcript3919.chr10.nnic@WAPL	transcript3919.chr10.nnic	protein_coding	86521365,86517571,86499718,86497201,86473878,86472208,86470992,86467279,86461176,86460399,86458989,86453656,86453220,86451967,86446242,86443275,86437920,86435256	86521829,86518091,86500743,86497319,86473973,86472344,86471103,86467506,86461287,86460496,86459065,86453831,86453335,86452131,86446449,86443363,86438015,86437608	Gene ID= ENSG00000062650.18 TPM= 5.45 Transcript Type= NA
chr10	86437010	86521829	86437010	86521829	-	transcript3923.chr10.nnic@WAPL	transcript3923.chr10.nnic	protein_coding	86521365,86517571,86499718,86497201,86473878,86472612,86472208,86470992,86461176,86460399,86458989,86453656,86453220,86451967,86446242,86443275,86437920,86437010	86521829,86518091,86500743,86497319,86473973,86472764,86472344,86471103,86461287,86460496,86459065,86453831,86453335,86452131,86446449,86443363,86438015,86437608	Gene ID= ENSG00000062650.18 TPM= 2.34 Transcript Type= NA
chr10	86498394	86521777	86498394	86521777	-	transcript3930.chr10.nic@WAPL	transcript3930.chr10.nic	protein_coding	86521365,86517571,86498394	86521777,86518091,86500743	Gene ID= ENSG00000062650.18 TPM= 7.01 Transcript Type= NA
chr10	86435256	86521815	86435256	86521815	-	ENST00000298767.9@WAPL	ENST00000298767.9	protein_coding	86521365,86517571,86499718,86497201,86473878,86472612,86472208,86470992,86467279,86461176,86460399,86458989,86453656,86453220,86451967,86446242,86443275,86437920,86435256	86521815,86518091,86500743,86497319,86473973,86472764,86472344,86471103,86467506,86461287,86460496,86459065,86453831,86453335,86452131,86446449,86443363,86438015,86437608	Gene ID= ENSG00000062650.18 TPM= 42.23 Transcript Type= protein_coding
chr10	86487950	86489898	86487950	86489898	+	transcript3931.chr10.nnic@NA	transcript3931.chr10.nnic	NA	86487950	86489898	Gene ID= novel_gene_chr10_3932 TPM= 2.34 Transcript Type= NA
chr10	86756614	86925184	86756614	86925184	+	transcript3939.chr10.nic@BMPR1A	transcript3939.chr10.nic	protein_coding	86756614,86838865,86843406,86875867,86890062,86892127,86899794,86900027,86912240,86917134,86919172,86921520,86923376,86923594	86756919,86838979,86843510,86876085,86890224,86892229,86899890,86900126,86912384,86917326,86919469,86921695,86923506,86925184	Gene ID= ENSG00000107779.13 TPM= 7.59 Transcript Type= NA
chr10	86756708	86925184	86756708	86925184	+	transcript3948.chr10.nnic@BMPR1A	transcript3948.chr10.nnic	protein_coding	86756708,86838865,86875867,86890062,86892127,86912240,86917134,86919172,86921520,86923376,86923594	86756919,86838979,86876085,86890224,86892229,86912384,86917326,86919469,86921695,86923506,86925184	Gene ID= ENSG00000107779.13 TPM= 2.92 Transcript Type= NA
chr10	86935540	86957569	86935540	86957569	-	transcript3968.chr10.nic@MMRN2	transcript3968.chr10.nic	protein_coding	86957378,86945561,86945370,86945188,86942317,86935540	86957569,86945689,86945476,86945268,86944435,86937125	Gene ID= ENSG00000173269.13 TPM= 17.51 Transcript Type= NA
chr10	86955759	86963258	86955759	86963258	+	transcript3957.chr10.nnic@SNCG	transcript3957.chr10.nnic	protein_coding	86955759,86956330,86958588,86959633,86960001,86962604,86962965	86955856,86956425,86958818,86959674,86960128,86962675,86963258	Gene ID= ENSG00000173267.13 TPM= 5.25 Transcript Type= NA
chr10	86957725	86963258	86957725	86963258	+	transcript3965.chr10.nnic@SNCG	transcript3965.chr10.nnic	protein_coding	86957725,86958588,86959633,86960001,86962604,86962965	86958002,86958818,86959674,86960128,86962675,86963258	Gene ID= ENSG00000173267.13 TPM= 4.09 Transcript Type= NA
chr10	86958656	86963260	86958656	86963260	+	ENST00000372017.3@SNCG	ENST00000372017.3	protein_coding	86958656,86959633,86960001,86962604,86962965	86958818,86959674,86960128,86962675,86963260	Gene ID= ENSG00000173267.13 TPM= 11.68 Transcript Type= protein_coding
chr10	86959375	86963258	86959375	86963258	+	ENST00000483064.1@SNCG	ENST00000483064.1	protein_coding	86959375,86960001,86962604,86962965	86959674,86960128,86962675,86963258	Gene ID= ENSG00000173267.13 TPM= 1.17 Transcript Type= processed_transcript
chr10	86965738	86971267	86965738	86971267	-	transcript3980.chr10.nnic@NA	transcript3980.chr10.nnic	NA	86965738	86971267	Gene ID= novel_gene_chr10_3981 TPM= 16.35 Transcript Type= NA
chr10	86968192	86970915	86968192	86970915	+	ENST00000372013.7@ADIRF	ENST00000372013.7	protein_coding	86968192,86970200,86970476	86968605,86970262,86970915	Gene ID= ENSG00000148671.13 TPM= 142.45 Transcript Type= protein_coding
chr10	86968479	86970730	86968479	86970730	+	transcript3976.chr10.nnic@NA	transcript3976.chr10.nnic	NA	86968479	86970730	Gene ID= novel_gene_chr10_3977 TPM= 5.84 Transcript Type= NA
chr10	86969819	86972526	86969819	86972526	+	transcript3978.chr10.nnic@NA	transcript3978.chr10.nnic	NA	86969819	86972526	Gene ID= novel_gene_chr10_3979 TPM= 3.5 Transcript Type= NA
chr10	87040400	87042438	87040400	87042438	-	transcript3985.chr10.nnic@NA	transcript3985.chr10.nnic	NA	87040400	87042438	Gene ID= novel_gene_chr10_3986 TPM= 3.5 Transcript Type= NA
chr10	87050486	87094866	87050486	87094866	-	ENST00000277865.4@GLUD1	ENST00000277865.4	protein_coding	87094325,87076576,87075968,87074551,87068063,87062656,87060915,87060688,87060161,87059150,87057691,87053342,87050486	87094866,87076656,87076023,87074614,87068157,87062835,87061052,87060825,87060241,87059273,87057782,87053404,87051870	Gene ID= ENSG00000148672.8 TPM= 175.14 Transcript Type= protein_coding
chr10	87095207	87191463	87095207	87191463	+	transcript4000.chr10.nnic@FAM35A	transcript4000.chr10.nnic	protein_coding	87095207,87096934,87104682,87151350,87158048,87170478,87170840,87175889,87180075,87187085,87190484	87095248,87096989,87104962,87152879,87158155,87170672,87170974,87176095,87180303,87187200,87191463	Gene ID= ENSG00000122376.11 TPM= 2.63 Transcript Type= NA
chr10	87095207	87191463	87095207	87191463	+	transcript4002.chr10.nnic@FAM35A	transcript4002.chr10.nnic	protein_coding	87095207,87096934,87121792,87151350,87158048,87170478,87170840,87175889,87180075,87187085,87190484	87095248,87096989,87121907,87152879,87158155,87170672,87170974,87176095,87180303,87187200,87191463	Gene ID= ENSG00000122376.11 TPM= 2.63 Transcript Type= NA
chr10	87095196	87191468	87095196	87191468	+	ENST00000298786.4@FAM35A	ENST00000298786.4	protein_coding	87095196,87096934,87151350,87158048,87170478,87170840,87175889,87180075,87187085,87190484	87095248,87096989,87152879,87158155,87170672,87170974,87176095,87180303,87187200,87191468	Gene ID= ENSG00000122376.11 TPM= 29.48 Transcript Type= protein_coding
chr10	87095196	87191463	87095196	87191463	+	ENST00000298784.5@FAM35A	ENST00000298784.5	protein_coding	87095196,87096934,87151350,87158048,87170478,87170840,87180075,87187085,87190484	87095248,87096989,87152879,87158155,87170672,87170974,87180303,87187200,87191463	Gene ID= ENSG00000122376.11 TPM= 4.96 Transcript Type= protein_coding
chr10	87209831	87342363	87209831	87342363	-	transcript4024.chr10.nnic@NUTM2A-AS1	transcript4024.chr10.nnic	antisense_RNA	87342242,87336786,87326630,87288442,87246115,87215994,87209831	87342363,87336889,87326672,87288495,87246212,87216173,87214278	Gene ID= ENSG00000223482.7 TPM= 9.34 Transcript Type= NA
chr10	87238667	87342612	87238667	87342612	-	ENST00000433920.5@NUTM2A-AS1	ENST00000433920.5	antisense_RNA	87342242,87336786,87326630,87288442,87246115,87238667	87342612,87336889,87326672,87288495,87246212,87238872	Gene ID= ENSG00000223482.7 TPM= 1.17 Transcript Type= antisense_RNA
chr10	87244132	87342612	87244132	87342612	-	ENST00000446751.5@NUTM2A-AS1	ENST00000446751.5	antisense_RNA	87342242,87336786,87326630,87288442,87246115,87244132	87342612,87336889,87326672,87288495,87246212,87245855	Gene ID= ENSG00000223482.7 TPM= 1.17 Transcript Type= antisense_RNA
chr10	87318664	87342391	87318664	87342391	-	transcript4038.chr10.nic@NUTM2A-AS1	transcript4038.chr10.nic	antisense_RNA	87342242,87336786,87326630,87318664	87342391,87336889,87326672,87320199	Gene ID= ENSG00000223482.7 TPM= 4.67 Transcript Type= NA
chr10	87342412	87345048	87342412	87345048	+	transcript4045.chr10.nnic@NA	transcript4045.chr10.nnic	NA	87342412	87345048	Gene ID= novel_gene_chr10_4046 TPM= 3.5 Transcript Type= NA
chr10	87504894	87553388	87504894	87553388	+	transcript4047.chr10.nnic@MINPP1	transcript4047.chr10.nnic	protein_coding	87504894,87508336,87513124,87514761,87521036,87552082	87505552,87508533,87513221,87514878,87521169,87553388	Gene ID= ENSG00000107789.15 TPM= 2.92 Transcript Type= NA
chr10	87504875	87553388	87504875	87553388	+	ENST00000371996.8@MINPP1	ENST00000371996.8	protein_coding	87504875,87508336,87513124,87521036,87552082	87505552,87508533,87513221,87521169,87553388	Gene ID= ENSG00000107789.15 TPM= 57.8 Transcript Type= protein_coding
chr10	87659613	87747705	87659613	87747705	+	ENST00000361175.8@PAPSS2	ENST00000361175.8	protein_coding	87659613,87709196,87713075,87714044,87714745,87714985,87715732,87727284,87741235,87743373,87745002,87745832	87660008,87709313,87713310,87714182,87714863,87715098,87715843,87727489,87741370,87743641,87745231,87747705	Gene ID= ENSG00000198682.12 TPM= 323.04 Transcript Type= protein_coding
chr10	87659719	87747703	87659719	87747703	+	ENST00000456849.1@PAPSS2	ENST00000456849.1	protein_coding	87659719,87709196,87713075,87714044,87714745,87714985,87715732,87721756,87727284,87741235,87743373,87745002,87745832	87660008,87709313,87713310,87714182,87714863,87715098,87715843,87721770,87727489,87741370,87743641,87745231,87747703	Gene ID= ENSG00000198682.12 TPM= 27.64 Transcript Type= protein_coding
chr10	87663108	87667126	87663108	87667126	-	transcript4073.chr10.nnic@NA	transcript4073.chr10.nnic	NA	87663108	87667126	Gene ID= novel_gene_chr10_4074 TPM= 23.35 Transcript Type= NA
chr10	87718280	87724271	87718280	87724271	+	transcript4071.chr10.nnic@NA	transcript4071.chr10.nnic	NA	87718280	87724271	Gene ID= novel_gene_chr10_4072 TPM= 3.5 Transcript Type= NA
chr10	87751024	87818213	87751024	87818213	-	transcript4076.chr10.nnic@ATAD1	transcript4076.chr10.nnic	protein_coding	87818167,87814438,87792657,87790310,87784470,87776321,87770952,87767673,87756789,87751024	87818213,87814612,87792755,87790430,87784670,87776427,87771041,87767723,87756922,87754807	Gene ID= ENSG00000138138.13 TPM= 5.84 Transcript Type= NA
chr10	87751656	87818188	87751656	87818188	-	transcript4086.chr10.nnic@ATAD1	transcript4086.chr10.nnic	protein_coding	87817795,87814438,87792657,87790310,87784470,87776321,87770952,87767673,87751656	87818188,87814612,87792755,87790430,87784670,87776427,87771041,87767723,87753498	Gene ID= ENSG00000138138.13 TPM= 2.34 Transcript Type= NA
chr10	87751512	87818160	87751512	87818160	-	ENST00000308448.11@ATAD1	ENST00000308448.11	protein_coding	87817795,87814438,87792657,87790310,87784470,87776321,87770952,87767673,87756789,87751512	87818160,87814612,87792755,87790430,87784670,87776427,87771041,87767723,87756922,87754807	Gene ID= ENSG00000138138.13 TPM= 3.5 Transcript Type= protein_coding
chr10	87863113	87971930	87863113	87971930	+	ENST00000371953.7@PTEN	ENST00000371953.7	protein_coding	87863113,87894025,87925513,87931046,87933013,87952118,87957853,87960894,87965287	87864548,87894109,87925557,87931089,87933251,87952259,87958019,87961118,87971930	Gene ID= ENSG00000171862.10 TPM= 43.2 Transcript Type= protein_coding
chr10	87863614	87866083	87863614	87866083	+	transcript4104.chr10.nnic@NA	transcript4104.chr10.nnic	NA	87863614	87866083	Gene ID= novel_gene_chr10_4105 TPM= 2.34 Transcript Type= NA
chr10	87934895	87939211	87934895	87939211	-	transcript4106.chr10.nnic@NA	transcript4106.chr10.nnic	NA	87934895	87939211	Gene ID= novel_gene_chr10_4107 TPM= 3.5 Transcript Type= NA
chr10	88273864	88584530	88273864	88584530	-	ENST00000371947.7@RNLS	ENST00000371947.7	protein_coding	88583073,88582202,88581567,88572903,88362552,88314466,88273864	88584530,88582307,88581709,88573061,88362725,88314641,88275032	Gene ID= ENSG00000184719.11 TPM= 1.17 Transcript Type= protein_coding
chr10	88284959	88583213	88284959	88583213	-	ENST00000331772.8@RNLS	ENST00000331772.8	protein_coding	88583073,88582202,88581567,88572903,88362552,88314466,88284959	88583213,88582307,88581709,88573061,88362725,88314641,88285506	Gene ID= ENSG00000184719.11 TPM= 3.5 Transcript Type= protein_coding
chr10	88582921	88584528	88582921	88584528	+	transcript4112.chr10.nnic@NA	transcript4112.chr10.nnic	NA	88582921	88584528	Gene ID= novel_gene_chr10_4113 TPM= 3.5 Transcript Type= NA
chr10	88879734	88923487	88879734	88923487	+	ENST00000371926.7@STAMBPL1	ENST00000371926.7	protein_coding	88879734,88901656,88905443,88908702,88910916,88913101,88914534,88916680,88921283,88922337,88923168	88880638,88901738,88905660,88908777,88911011,88913458,88914658,88916817,88921395,88922436,88923487	Gene ID= ENSG00000138134.11 TPM= 3.5 Transcript Type= protein_coding
chr10	88935074	88991558	88935074	88991558	-	transcript4128.chr10.nic@ACTA2	transcript4128.chr10.nic	protein_coding	88990939,88948802,88947258,88943797,88941785,88941229,88939507,88938061,88935074	88991558,88948953,88947386,88943907,88941869,88941390,88939698,88938242,88935366	Gene ID= ENSG00000107796.13 TPM= 57.21 Transcript Type= NA
chr10	88935074	88991397	88935074	88991397	-	transcript4129.chr10.nic@ACTA2	transcript4129.chr10.nic	protein_coding	88991022,88948802,88947258,88943797,88941785,88941229,88939507,88938061,88935074	88991397,88948953,88947386,88943907,88941869,88941390,88939698,88938242,88935366	Gene ID= ENSG00000107796.13 TPM= 15.18 Transcript Type= NA
chr10	88935074	88952773	88935074	88952773	-	ENST00000224784.10@ACTA2	ENST00000224784.10	protein_coding	88952731,88948802,88947258,88943797,88941785,88941229,88939507,88938061,88935074	88952773,88948953,88947386,88943907,88941869,88941390,88939698,88938242,88935366	Gene ID= ENSG00000107796.13 TPM= 525.42 Transcript Type= protein_coding
chr10	88990883	89014342	88990883	89014342	+	transcript4137.chr10.nic@FAS	transcript4137.chr10.nic	protein_coding	88990883,89003029,89007700,89008889,89010539	88990906,89003194,89007837,89008997,89014342	Gene ID= ENSG00000026103.21 TPM= 2.34 Transcript Type= NA
chr10	88990657	89015785	88990657	89015785	+	ENST00000355740.6@FAS	ENST00000355740.6	protein_coding	88990657,89003029,89007700,89008889,89010539,89010753,89011999,89013343,89014119	88990906,89003194,89007837,89008997,89010600,89010815,89012081,89013367,89015785	Gene ID= ENSG00000026103.21 TPM= 16.35 Transcript Type= protein_coding
chr10	89205929	89207319	89205929	89207319	-	transcript4155.chr10.nnic@NA	transcript4155.chr10.nnic	NA	89205929	89207319	Gene ID= novel_gene_chr10_4156 TPM= 11.68 Transcript Type= NA
chr10	89213569	89252058	89213569	89252058	-	ENST00000336233.9@LIPA	ENST00000336233.9	protein_coding	89251737,89247538,89245676,89228200,89226895,89225092,89223684,89222511,89215938,89213569	89252058,89247649,89245793,89228398,89227004,89225228,89223830,89222582,89216009,89215061	Gene ID= ENSG00000107798.17 TPM= 311.75 Transcript Type= protein_coding
chr10	89301955	89309276	89301955	89309276	+	ENST00000371826.3@IFIT2	ENST00000371826.3	protein_coding	89301955,89305962	89302128,89309276	Gene ID= ENSG00000119922.9 TPM= 281.39 Transcript Type= protein_coding
chr10	89302046	89305002	89302046	89305002	+	transcript4160.chr10.nnic@NA	transcript4160.chr10.nnic	NA	89302046	89305002	Gene ID= novel_gene_chr10_4161 TPM= 2.34 Transcript Type= NA
chr10	89332484	89340971	89332484	89340971	+	ENST00000371811.4@IFIT3	ENST00000371811.4	protein_coding	89332484,89338661	89332627,89340971	Gene ID= ENSG00000119917.13 TPM= 33.28 Transcript Type= protein_coding
chr10	89327894	89340971	89327894	89340971	+	ENST00000371818.8@IFIT3	ENST00000371818.8	protein_coding	89327894,89338661	89328078,89340971	Gene ID= ENSG00000119917.13 TPM= 71.81 Transcript Type= protein_coding
chr10	89392614	89403983	89392614	89403983	+	transcript4167.chr10.nnic@IFIT1	transcript4167.chr10.nnic	protein_coding	89392614,89399895,89402281	89392717,89400003,89403983	Gene ID= ENSG00000185745.9 TPM= 7.01 Transcript Type= NA
chr10	89392546	89403988	89392546	89403988	+	ENST00000371804.3@IFIT1	ENST00000371804.3	protein_coding	89392546,89402281	89392717,89403988	Gene ID= ENSG00000185745.9 TPM= 88.74 Transcript Type= protein_coding
chr10	89413855	89415481	89413855	89415481	-	transcript4176.chr10.nnic@NA	transcript4176.chr10.nnic	NA	89413855	89415481	Gene ID= novel_gene_chr10_4177 TPM= 8.17 Transcript Type= NA
chr10	89414586	89421001	89414586	89421001	+	ENST00000371795.4@IFIT5	ENST00000371795.4	protein_coding	89414586,89417205	89414803,89421001	Gene ID= ENSG00000152778.8 TPM= 26.85 Transcript Type= protein_coding
chr10	89579497	89645572	89579497	89645572	-	ENST00000307534.8@PANK1	ENST00000307534.8	protein_coding	89644600,89611696,89599252,89593813,89593197,89588652,89579497	89645572,89612048,89599505,89593989,89593320,89588777,89584465	Gene ID= ENSG00000152782.16 TPM= 2.34 Transcript Type= protein_coding
chr10	89701610	89774939	89701610	89774939	+	ENST00000260753.8@KIF20B	ENST00000260753.8	protein_coding	89701610,89705294,89709167,89709345,89709927,89710961,89714047,89714955,89716436,89717424,89717576,89718710,89719419,89723964,89725020,89726413,89727856,89729128,89732903,89737387,89738958,89743808,89745899,89751346,89752567,89754518,89758706,89760526,89762638,89768290,89768738,89772689,89773971	89701680,89705441,89709253,89709461,89710065,89711145,89714083,89715182,89716547,89717495,89717722,89718872,89719706,89724103,89725158,89726521,89727896,89729247,89733056,89738617,89739096,89743927,89745959,89751471,89752691,89754673,89758882,89760636,89762835,89768391,89768888,89772831,89774939	Gene ID= ENSG00000138182.14 TPM= 4.67 Transcript Type= protein_coding
chr10	89837016	89840862	89837016	89840862	+	transcript4190.chr10.nnic@NA	transcript4190.chr10.nnic	NA	89837016	89840862	Gene ID= novel_gene_chr10_4191 TPM= 16.35 Transcript Type= NA
chr10	90871716	90902190	90871716	90902190	+	ENST00000371703.7@RPP30	ENST00000371703.7	protein_coding	90871716,90874869,90875558,90876024,90879063,90885812,90894775,90895454,90895880,90896313,90900570	90872068,90874924,90875614,90876098,90879134,90885901,90894891,90895483,90895917,90896392,90902190	Gene ID= ENSG00000148688.13 TPM= 9.34 Transcript Type= protein_coding
chr10	90912096	90921276	90912096	90921276	-	ENST00000371697.3@ANKRD1	ENST00000371697.3	protein_coding	90921001,90920169,90919131,90918865,90917732,90916171,90915782,90915543,90912096	90921276,90920348,90919268,90918972,90917830,90916269,90915880,90915641,90912976	Gene ID= ENSG00000148677.6 TPM= 18.68 Transcript Type= protein_coding
chr10	91162993	91280984	91162993	91280984	+	transcript4217.chr10.nnic@PCGF5	transcript4217.chr10.nnic	protein_coding	91162993,91222689,91240484,91248505,91248665,91251292,91261326,91264431,91278269	91163081,91222983,91240580,91248560,91248724,91251440,91261424,91264520,91280984	Gene ID= ENSG00000180628.14 TPM= 4.09 Transcript Type= NA
chr10	91220640	91280984	91220640	91280984	+	transcript4219.chr10.nnic@PCGF5	transcript4219.chr10.nnic	protein_coding	91220640,91222689,91240484,91248505,91248665,91251292,91261326,91264431,91278269	91220836,91222983,91240580,91248560,91248724,91251440,91261424,91264520,91280984	Gene ID= ENSG00000180628.14 TPM= 4.09 Transcript Type= NA
chr10	91410344	91463664	91410344	91463664	+	ENST00000371681.8@HECTD2	ENST00000371681.8	protein_coding	91410344,91425281,91460427,91461254,91462095	91410576,91425410,91460565,91461356,91463664	Gene ID= ENSG00000165338.16 TPM= 2.34 Transcript Type= protein_coding
chr10	91628442	91633054	91628442	91633054	-	ENST00000238994.5@PPP1R3C	ENST00000238994.5	protein_coding	91632956,91628442	91633054,91630866	Gene ID= ENSG00000119938.8 TPM= 22.18 Transcript Type= protein_coding
chr10	91798312	91865276	91798312	91865276	+	ENST00000371627.4@TNKS2	ENST00000371627.4	protein_coding	91798312,91812983,91817134,91819270,91819482,91819939,91822296,91827017,91828285,91830923,91831103,91833853,91836919,91840561,91841283,91842172,91844919,91845752,91848383,91849512,91851216,91855029,91855614,91857425,91859462,91861999,91862937	91798889,91813207,91817229,91819306,91819557,91820033,91822362,91827203,91828406,91831014,91831181,91834024,91836998,91840706,91841448,91842391,91845028,91845940,91848635,91849594,91851336,91855126,91855688,91857530,91859648,91862155,91865276	Gene ID= ENSG00000107854.5 TPM= 22.77 Transcript Type= protein_coding
chr10	91798426	91865276	91798426	91865276	+	transcript4233.chr10.nnic@TNKS2	transcript4233.chr10.nnic	protein_coding	91798426,91812983,91817134,91819270,91819482,91819939,91822296,91827017,91828285,91830923,91831103,91833853,91836919,91840561,91841283,91842172,91844919,91845752,91848383,91849512,91851216,91855029,91855614,91857425,91859462,91861999,91862937	91798952,91813207,91817229,91819306,91819557,91820033,91822362,91827203,91828406,91831014,91831181,91834024,91836998,91840706,91841448,91842391,91845028,91845940,91848635,91849594,91851336,91855126,91855688,91857530,91859648,91862155,91865276	Gene ID= ENSG00000107854.5 TPM= 6.42 Transcript Type= NA
chr10	91907760	91908999	91907760	91908999	-	transcript4242.chr10.nnic@NA	transcript4242.chr10.nnic	NA	91907760	91908999	Gene ID= novel_gene_chr10_4243 TPM= 5.84 Transcript Type= NA
chr10	91923769	92030325	91923769	92030325	+	ENST00000265990.10@BTAF1	ENST00000265990.10	protein_coding	91923769,91935657,91939952,91942422,91951403,91953737,91956528,91957225,91959065,91959785,91959978,91962538,91964077,91966637,91980454,91981643,91982083,91982587,91984201,91989154,91992119,91993694,91994535,91996369,91997603,92008123,92008829,92009041,92011073,92011286,92013667,92013899,92016340,92018783,92024756,92026592,92027130,92028790	91924090,91935780,91940066,91942568,91951566,91953873,91956657,91957293,91959154,91959880,91960154,91962678,91964201,91966757,91980558,91981792,91982225,91982761,91984404,91989580,91992309,91993847,91994644,91996570,91997751,92008275,92008950,92009208,92011150,92011415,92013808,92014029,92016465,92018935,92024967,92026751,92027300,92030325	Gene ID= ENSG00000095564.13 TPM= 2.72 Transcript Type= protein_coding
chr10	91923770	92030325	91923770	92030325	+	transcript4251.chr10.nic@BTAF1	transcript4251.chr10.nic	protein_coding	91923770,91935657,91939952,91942422,91951403,91953737,91956528,91957225,91959065,91959785,91959978,91962538,91964077,91966637,91980454,91981643,91982083,91982587,91984201,91989154,91992119,91993694,91994535,91996369,91997603,92008123,92008829,92009041,92011073,92011286,92013667,92013899,92016340,92018783,92024756,92026592,92027130,92028790	91924090,91935780,91940066,91942568,91951566,91953873,91956657,91957293,91959282,91959880,91960154,91962678,91964201,91966757,91980558,91981792,91982225,91982761,91984404,91989580,91992309,91993847,91994644,91996570,91997751,92008275,92008950,92009208,92011150,92011415,92013808,92014029,92016465,92018935,92024967,92026751,92027300,92030325	Gene ID= ENSG00000095564.13 TPM= 5.06 Transcript Type= NA
chr10	91923770	92030325	91923770	92030325	+	transcript4253.chr10.nnic@BTAF1	transcript4253.chr10.nnic	protein_coding	91923770,91935657,91939952,91942422,91951403,91953737,91956528,91957225,91959065,91959785,91959978,91962538,91964077,91966637,91980454,91981643,91982083,91982587,91984201,91989154,91992119,91993694,91994535,91996369,91997603,92008829,92009041,92011073,92011286,92013667,92013899,92016340,92018783,92024756,92026592,92027130,92028790	91924090,91935780,91940066,91942568,91951566,91953873,91956657,91957293,91959282,91959880,91960154,91962678,91964201,91966757,91980558,91981792,91982225,91982761,91984404,91989580,91992309,91993847,91994644,91996570,91997751,92008950,92009208,92011150,92011415,92013808,92014029,92016465,92018935,92024967,92026751,92027300,92030325	Gene ID= ENSG00000095564.13 TPM= 2.72 Transcript Type= NA
chr10	91923770	91938989	91923770	91938989	+	transcript4260.chr10.nic@BTAF1	transcript4260.chr10.nic	protein_coding	91923770,91935657	91924090,91938989	Gene ID= ENSG00000095564.13 TPM= 3.5 Transcript Type= NA
chr10	91925518	91927059	91925518	91927059	-	transcript4261.chr10.nnic@NA	transcript4261.chr10.nnic	NA	91925518	91927059	Gene ID= novel_gene_chr10_4262 TPM= 3.5 Transcript Type= NA
chr10	92291167	92352082	92291167	92352082	+	transcript4267.chr10.nnic@MARCH5	transcript4267.chr10.nnic	protein_coding	92291167,92300917,92311135,92340673,92349349,92349671,92351091	92291529,92301028,92311337,92340803,92349532,92349837,92352082	Gene ID= ENSG00000198060.9 TPM= 2.34 Transcript Type= NA
chr10	92291158	92352082	92291158	92352082	+	transcript4284.chr10.nic@MARCH5	transcript4284.chr10.nic	protein_coding	92291158,92311135,92340673,92349349,92349671	92291529,92311337,92340803,92349532,92352082	Gene ID= ENSG00000198060.9 TPM= 3.5 Transcript Type= NA
chr10	92291158	92314058	92291158	92314058	+	transcript4289.chr10.nic@MARCH5	transcript4289.chr10.nic	protein_coding	92291158,92311135	92291529,92314058	Gene ID= ENSG00000198060.9 TPM= 2.34 Transcript Type= NA
chr10	92291163	92353964	92291163	92353964	+	ENST00000358935.2@MARCH5	ENST00000358935.2	protein_coding	92291163,92311135,92340673,92349349,92349671,92351091	92291529,92311337,92340803,92349532,92349837,92353964	Gene ID= ENSG00000198060.9 TPM= 4.67 Transcript Type= protein_coding
chr10	92505785	92508573	92505785	92508573	+	transcript4306.chr10.nnic@NA	transcript4306.chr10.nnic	NA	92505785	92508573	Gene ID= novel_gene_chr10_4307 TPM= 3.5 Transcript Type= NA
chr10	92689951	92695646	92689951	92695646	+	ENST00000282728.9@HHEX	ENST00000282728.9	protein_coding	92689951,92692368,92692702,92694547	92690347,92692546,92692752,92695646	Gene ID= ENSG00000152804.10 TPM= 21.02 Transcript Type= protein_coding
chr10	92691820	92695641	92691820	92695641	+	ENST00000472590.6@HHEX	ENST00000472590.6	protein_coding	92691820,92692368,92692702,92694547	92692099,92692546,92692752,92695641	Gene ID= ENSG00000152804.10 TPM= 1.17 Transcript Type= protein_coding
chr10	92831108	93059490	92831108	93059490	+	transcript4313.chr10.nnic@EXOC6	transcript4313.chr10.nnic	protein_coding	92831108,92834713,92893349,92894794,92894930,92899599,92909427,92915758,92919982,92928339,92934144,92934310,92935814,92940727,92948274,92952273,92954630,92955580,92974053,92997474,93014194,93056924,93058223	92831357,92834824,92893520,92894841,92895020,92899644,92909631,92915913,92920050,92928422,92934190,92934430,92935885,92940824,92948379,92952382,92954741,92955714,92974232,92997615,93014267,93057036,93059490	Gene ID= ENSG00000138190.16 TPM= 6.42 Transcript Type= NA
chr10	92848520	93059490	92848520	93059490	+	ENST00000260762.10@EXOC6	ENST00000260762.10	protein_coding	92848520,92893349,92894794,92894930,92899599,92909427,92915758,92919982,92928339,92934144,92934310,92935814,92940727,92948274,92952273,92954630,92955580,92974053,92997474,93014194,93056924,93058223	92848634,92893520,92894841,92895020,92899644,92909631,92915913,92920050,92928422,92934190,92934430,92935885,92940824,92948379,92952382,92954741,92955714,92974232,92997615,93014267,93057036,93059490	Gene ID= ENSG00000138190.16 TPM= 18.1 Transcript Type= protein_coding
chr10	92961703	92965990	92961703	92965990	-	transcript4319.chr10.nnic@NA	transcript4319.chr10.nnic	NA	92961703	92965990	Gene ID= novel_gene_chr10_4320 TPM= 2.34 Transcript Type= NA
chr10	93306430	93482194	93306430	93482194	-	ENST00000358334.9@MYOF	ENST00000358334.9	protein_coding	93482107,93456882,93452050,93431408,93426071,93409573,93408787,93404157,93404023,93402860,93402232,93401418,93399392,93397388,93397247,93396142,93389030,93387797,93381219,93379863,93377323,93374763,93372930,93369645,93366392,93363961,93361452,93359833,93356675,93355628,93353811,93351665,93351413,93351197,93349808,93347617,93343856,93340153,93337815,93335921,93333758,93333221,93329664,93328763,93325826,93323270,93323078,93319872,93316714,93313020,93310534,93310020,93306430	93482194,93456937,93452141,93431516,93426158,93409739,93408915,93404219,93404073,93402890,93402347,93401544,93399495,93397456,93397290,93396224,93389154,93387913,93381396,93379987,93377429,93374955,93373085,93369776,93366555,93364075,93361557,93359978,93356848,93355736,93353888,93351846,93351571,93351295,93349969,93347782,93343932,93340164,93337913,93336046,93333913,93333312,93329834,93328911,93325965,93323358,93323173,93320013,93316813,93313210,93310643,93310167,93307001	Gene ID= ENSG00000138119.16 TPM= 16.35 Transcript Type= protein_coding
chr10	93306430	93482194	93306430	93482194	-	ENST00000359263.8@MYOF	ENST00000359263.8	protein_coding	93482107,93456882,93452050,93431408,93426071,93409573,93408787,93404157,93404023,93402860,93402232,93401418,93399392,93397388,93397247,93396142,93392917,93389030,93387797,93381219,93379863,93377323,93374763,93372930,93369645,93366392,93363961,93361452,93359833,93356675,93355628,93353811,93351665,93351413,93351197,93349808,93347617,93343856,93340153,93337815,93335921,93333758,93333221,93329664,93328763,93325826,93323270,93323078,93319872,93316714,93313020,93310534,93310020,93306430	93482194,93456937,93452141,93431516,93426158,93409739,93408915,93404219,93404073,93402890,93402347,93401544,93399495,93397456,93397290,93396224,93392955,93389154,93387913,93381396,93379987,93377429,93374955,93373085,93369776,93366555,93364075,93361557,93359978,93356848,93355736,93353888,93351846,93351571,93351295,93349969,93347782,93343932,93340164,93337913,93336046,93333913,93333312,93329834,93328911,93325965,93323358,93323173,93320013,93316813,93313210,93310643,93310167,93307001	Gene ID= ENSG00000138119.16 TPM= 12.84 Transcript Type= protein_coding
chr10	93566665	93590072	93566665	93590072	+	ENST00000371481.8@FFAR4	ENST00000371481.8	protein_coding	93566665,93576091,93587220	93567287,93576219,93590072	Gene ID= ENSG00000186188.10 TPM= 11.68 Transcript Type= protein_coding
chr10	93669679	93702602	93669679	93702602	-	transcript4342.chr10.nnic@FRA10AC1	transcript4342.chr10.nnic	protein_coding	93702375,93700030,93698301,93698136,93694861,93692646,93692009,93687404,93685246,93684056,93681480,93676653,93675628,93670770,93669679	93702602,93700106,93698396,93698181,93694937,93692729,93692093,93687449,93685359,93684098,93681598,93676691,93675701,93670848,93669868	Gene ID= ENSG00000148690.11 TPM= 3.5 Transcript Type= NA
chr10	93893973	93902733	93893973	93902733	+	ENST00000427197.1@SLC35G1	ENST00000427197.1	protein_coding	93893973,93898571,93900752	93894211,93898751,93902733	Gene ID= ENSG00000176273.14 TPM= 3.5 Transcript Type= protein_coding
chr10	93893973	93903824	93893973	93903824	+	ENST00000371408.7@SLC35G1	ENST00000371408.7	protein_coding	93893973,93898574,93900752	93894211,93898751,93903824	Gene ID= ENSG00000176273.14 TPM= 3.5 Transcript Type= protein_coding
chr10	93893991	93909830	93893991	93909830	+	ENST00000483386.5@SLC35G1	ENST00000483386.5	protein_coding	93893991,93906252,93907099	93894160,93906385,93909830	Gene ID= ENSG00000176273.14 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr10	94333226	94362939	94333226	94362939	-	ENST00000371361.3@NOC3L	ENST00000371361.3	protein_coding	94362830,94361665,94358083,94357174,94356535,94354963,94352896,94352310,94350113,94349250,94346425,94344853,94344415,94341673,94340433,94340276,94339739,94338608,94337777,94334634,94333226	94362939,94361872,94358215,94357331,94356591,94355093,94353057,94352403,94350288,94349378,94346556,94344933,94344515,94341745,94340496,94340347,94339920,94338736,94337874,94334718,94334305	Gene ID= ENSG00000173145.11 TPM= 36.2 Transcript Type= protein_coding
chr10	94348363	94349240	94348363	94349240	+	transcript4367.chr10.nnic@NA	transcript4367.chr10.nnic	NA	94348363	94349240	Gene ID= novel_gene_chr10_4368 TPM= 2.34 Transcript Type= NA
chr10	94402504	94533297	94402504	94533297	+	transcript4371.chr10.nnic@TBC1D12	transcript4371.chr10.nnic	protein_coding	94402504,94441896,94474668,94493365,94497055,94500221,94507267,94509620,94511583,94521955,94522344,94531202,94533028	94403584,94442019,94474783,94493447,94497172,94500327,94507347,94510179,94511654,94522083,94522453,94531460,94533297	Gene ID= ENSG00000108239.8 TPM= 2.34 Transcript Type= NA
chr10	94402503	94535930	94402503	94535930	+	transcript4377.chr10.nnic@TBC1D12	transcript4377.chr10.nnic	protein_coding	94402503,94441896,94474668,94493365,94497055,94500221,94507267,94510091,94511583,94521955,94522344,94531202,94533028	94403447,94442019,94474783,94493447,94497172,94500327,94507347,94510179,94511654,94522083,94522453,94531460,94535930	Gene ID= ENSG00000108239.8 TPM= 2.34 Transcript Type= NA
chr10	94403154	94533297	94403154	94533297	+	transcript4381.chr10.nnic@TBC1D12	transcript4381.chr10.nnic	protein_coding	94403154,94441896,94493365,94497055,94500221,94507267,94509620,94511583,94521955,94522344,94531202,94533028	94403584,94442019,94493447,94497172,94500327,94507347,94510179,94511654,94522083,94522453,94531460,94533297	Gene ID= ENSG00000108239.8 TPM= 2.34 Transcript Type= NA
chr10	94402504	94535930	94402504	94535930	+	ENST00000225235.4@TBC1D12	ENST00000225235.4	protein_coding	94402504,94441896,94474668,94493365,94497055,94500221,94507267,94510091,94511583,94521955,94522344,94531202,94533028	94403584,94442019,94474783,94493447,94497172,94500327,94507347,94510179,94511654,94522083,94522453,94531460,94535930	Gene ID= ENSG00000108239.8 TPM= 10.51 Transcript Type= protein_coding
chr10	95237572	95291024	95237572	95291024	-	ENST00000329399.6@PDLIM1	ENST00000329399.6	protein_coding	95290820,95271633,95268778,95263864,95247215,95238568,95237572	95291024,95271784,95268862,95264063,95247366,95238685,95238111	Gene ID= ENSG00000107438.8 TPM= 343.27 Transcript Type= protein_coding
chr10	95311773	95561411	95311773	95561411	-	transcript4390.chr10.nnic@SORBS1	transcript4390.chr10.nnic	protein_coding	95561320,95441126,95437490,95432448,95421961,95410633,95406118,95399017,95397220,95384238,95383985,95381685,95367650,95357631,95354882,95351209,95346406,95341564,95341285,95339133,95321963,95318320,95311773	95561411,95441180,95437555,95432576,95422073,95410777,95406147,95399189,95397283,95384285,95384114,95381799,95367699,95357803,95354967,95351376,95346452,95341678,95341410,95339327,95322021,95318432,95315126	Gene ID= ENSG00000095637.21 TPM= 8.17 Transcript Type= NA
chr10	95605945	95656643	95605945	95656643	-	transcript4392.chr10.nic@ALDH18A1	transcript4392.chr10.nic	protein_coding	95656446,95653290,95642992,95637287,95637093,95633491,95632959,95628368,95627442,95626703,95625362,95621031,95616477,95613966,95613742,95611256,95610197,95605945	95656643,95653405,95643206,95637436,95637197,95633649,95633049,95628492,95627586,95626776,95625455,95621251,95616614,95614161,95613863,95611442,95610292,95606943	Gene ID= ENSG00000059573.8 TPM= 12.84 Transcript Type= NA
chr10	95663401	95693968	95663401	95693968	-	transcript4404.chr10.nnic@TCTN3	transcript4404.chr10.nnic	protein_coding	95693644,95693353,95692920,95687592,95687247,95687044,95686495,95684499,95683522,95683101,95682651,95680472,95663401	95693968,95693476,95693038,95687719,95687355,95687159,95686530,95684624,95683629,95683195,95682804,95680609,95664300	Gene ID= ENSG00000119977.20 TPM= 3.5 Transcript Type= NA
chr10	95756127	95877266	95756127	95877266	+	transcript4418.chr10.nnic@ENTPD1	transcript4418.chr10.nnic	protein_coding	95756127,95823237,95839691,95842344,95844476,95845357,95847446,95860469,95864724,95876529	95756255,95823364,95839808,95842494,95844635,95845596,95847706,95860582,95864861,95877266	Gene ID= ENSG00000138185.19 TPM= 16.35 Transcript Type= NA
chr10	95756127	95867912	95756127	95867912	+	transcript4420.chr10.nnic@ENTPD1	transcript4420.chr10.nnic	protein_coding	95756127,95823237,95839691,95842344,95844476,95845357,95847569,95860469,95864724,95866177	95756255,95823364,95839808,95842494,95844635,95845596,95847706,95860582,95864861,95867912	Gene ID= ENSG00000138185.19 TPM= 3.5 Transcript Type= NA
chr10	95756162	95866753	95756162	95866753	+	ENST00000639992.1@ENTPD1	ENST00000639992.1	protein_coding	95756162,95823237,95839691,95844476,95845357,95847446,95860469,95864724,95866177	95756255,95823364,95839808,95844635,95845596,95847706,95860582,95864861,95866753	Gene ID= ENSG00000138185.19 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr10	95873037	95907891	95873037	95907891	-	transcript4434.chr10.nnic@ENTPD1-AS1	transcript4434.chr10.nnic	antisense_RNA	95907663,95904830,95897528,95894448,95876518,95873037	95907891,95904938,95897679,95894487,95876660,95875666	Gene ID= ENSG00000226688.6 TPM= 3.5 Transcript Type= NA
chr10	95873037	95908162	95873037	95908162	-	transcript4438.chr10.nic@ENTPD1-AS1	transcript4438.chr10.nic	antisense_RNA	95907778,95904830,95876518,95873037	95908162,95904938,95876660,95875666	Gene ID= ENSG00000226688.6 TPM= 4.67 Transcript Type= NA
chr10	95869243	95874118	95869243	95874118	-	transcript4443.chr10.nnic@NA	transcript4443.chr10.nnic	NA	95869243	95874118	Gene ID= novel_gene_chr10_4444 TPM= 47.87 Transcript Type= NA
chr10	96043394	96060870	96043394	96060870	+	ENST00000265992.9@CCNJ	ENST00000265992.9	protein_coding	96043394,96044353,96050256,96056701,96057121,96057830	96043719,96044462,96050466,96057000,96057247,96060870	Gene ID= ENSG00000107443.15 TPM= 1.17 Transcript Type= protein_coding
chr10	96043521	96060870	96043521	96060870	+	transcript4447.chr10.nnic@CCNJ	transcript4447.chr10.nnic	protein_coding	96043521,96044353,96056701,96057088,96057830	96043719,96044462,96057000,96057247,96060870	Gene ID= ENSG00000107443.15 TPM= 2.34 Transcript Type= NA
chr10	96130512	96162742	96130512	96162742	+	transcript4451.chr10.nnic@ZNF518A	transcript4451.chr10.nnic	protein_coding	96130512,96132586,96133583,96155326,96155924,96156197	96130752,96132670,96133648,96155376,96156047,96162742	Gene ID= ENSG00000177853.14 TPM= 3.5 Transcript Type= NA
chr10	96191702	96271540	96191702	96271540	-	ENST00000224337.9@BLNK	ENST00000224337.9	protein_coding	96271352,96246984,96242735,96230794,96227410,96223826,96216653,96215321,96209838,96207872,96207011,96204532,96204057,96200982,96200075,96196908,96191702	96271540,96247049,96242784,96230834,96227566,96223989,96216734,96215389,96209907,96207899,96207053,96204616,96204088,96201058,96200158,96197063,96192092	Gene ID= ENSG00000095585.16 TPM= 5.84 Transcript Type= protein_coding
chr10	96191702	96271540	96191702	96271540	-	ENST00000371176.6@BLNK	ENST00000371176.6	protein_coding	96271352,96246984,96242735,96230794,96227410,96223826,96216653,96209838,96207872,96207011,96204532,96204057,96200982,96200075,96196908,96191702	96271540,96247049,96242784,96230834,96227566,96223989,96216734,96209907,96207899,96207053,96204616,96204088,96201058,96200158,96197063,96192092	Gene ID= ENSG00000095585.16 TPM= 1.17 Transcript Type= protein_coding
chr10	96518109	96587052	96518109	96587052	-	ENST00000371142.8@TM9SF3	ENST00000371142.8	protein_coding	96586734,96576634,96565304,96561978,96559659,96552928,96551245,96547895,96544076,96533051,96530540,96528031,96527413,96527213,96518109	96587052,96576829,96565426,96562138,96559736,96553059,96551411,96547989,96544206,96533190,96530608,96528177,96527496,96527289,96522330	Gene ID= ENSG00000077147.14 TPM= 68.89 Transcript Type= protein_coding
chr10	96593312	96720570	96593312	96720570	-	transcript4487.chr10.nnic@PIK3AP1	transcript4487.chr10.nnic	protein_coding	96720382,96709567,96656798,96652698,96651509,96651248,96648659,96645473,96628398,96626708,96623472,96620352,96616639,96609712,96603979,96593312	96720570,96709983,96656934,96652842,96651651,96651380,96648855,96645662,96628493,96626905,96623537,96620557,96616711,96609867,96604049,96595634	Gene ID= ENSG00000155629.14 TPM= 3.5 Transcript Type= NA
chr10	96593312	96657020	96593312	96657020	-	transcript4491.chr10.nnic@PIK3AP1	transcript4491.chr10.nnic	protein_coding	96656798,96652698,96651509,96651248,96648659,96645473,96628398,96626708,96623472,96620352,96616639,96609712,96603979,96593312	96657020,96652842,96651651,96651380,96648855,96645662,96628493,96626905,96623537,96620557,96616711,96609867,96604049,96595634	Gene ID= ENSG00000155629.14 TPM= 3.5 Transcript Type= NA
chr10	96593312	96720514	96593312	96720514	-	ENST00000339364.9@PIK3AP1	ENST00000339364.9	protein_coding	96720382,96709567,96656798,96652698,96651509,96651248,96648659,96645473,96628398,96626708,96623472,96620352,96616639,96609712,96603979,96602280,96593312	96720514,96709983,96656934,96652842,96651651,96651380,96648855,96645662,96628493,96626905,96623537,96620557,96616711,96609867,96604049,96602398,96595634	Gene ID= ENSG00000155629.14 TPM= 116.96 Transcript Type= protein_coding
chr10	96750288	96750899	96750288	96750899	+	ENST00000439189.1@RPL13AP5	ENST00000439189.1	processed_pseudogene	96750288	96750899	Gene ID= ENSG00000236552.2 TPM= 137.78 Transcript Type= processed_pseudogene
chr10	96832250	96958926	96832250	96958926	+	transcript4500.chr10.nnic@LCOR	transcript4500.chr10.nnic	protein_coding	96832250,96907265,96907668,96944113,96949008,96952103,96954953	96832399,96907330,96907747,96944245,96949295,96952196,96958926	Gene ID= ENSG00000196233.13 TPM= 10.51 Transcript Type= NA
chr10	97222173	97292656	97222173	97292656	-	ENST00000358531.8@ARHGAP19	ENST00000358531.8	protein_coding	97292572,97265860,97264826,97263420,97259402,97256318,97246272,97243968,97235217,97229764,97229147,97222173	97292656,97266125,97264906,97263629,97259628,97256404,97246337,97244159,97235315,97229874,97229225,97226132	Gene ID= ENSG00000213390.10 TPM= 15.18 Transcript Type= protein_coding
chr10	97222180	97292656	97222180	97292656	-	transcript4507.chr10.nnic@ARHGAP19	transcript4507.chr10.nnic	protein_coding	97292572,97265860,97264826,97263420,97259402,97256318,97246272,97243968,97235217,97229764,97229147,97222180	97292656,97266125,97264906,97263489,97259628,97256404,97246337,97244159,97235315,97229874,97229225,97226132	Gene ID= ENSG00000213390.10 TPM= 3.5 Transcript Type= NA
chr10	97222180	97292647	97222180	97292647	-	transcript4512.chr10.nnic@ARHGAP19	transcript4512.chr10.nnic	protein_coding	97292572,97259402,97256318,97246272,97243968,97235217,97229764,97229147,97222180	97292647,97259628,97256404,97246337,97244159,97235315,97229874,97229225,97226132	Gene ID= ENSG00000213390.10 TPM= 3.5 Transcript Type= NA
chr10	97319267	97321915	97319267	97321915	+	ENST00000371021.4@FRAT1	ENST00000371021.4	protein_coding	97319267	97321915	Gene ID= ENSG00000165879.8 TPM= 15.18 Transcript Type= protein_coding
chr10	97332497	97334709	97332497	97334709	-	ENST00000371019.3@FRAT2	ENST00000371019.3	protein_coding	97332497	97334709	Gene ID= ENSG00000181274.6 TPM= 113.26 Transcript Type= protein_coding
chr10	97356701	97426074	97356701	97426074	-	ENST00000536831.5@RRP12	ENST00000536831.5	protein_coding	97426023,97401093,97400305,97396218,97393684,97390739,97390423,97388489,97388252,97385895,97385166,97381715,97381386,97380799,97379628,97379293,97373830,97373575,97373046,97372736,97372073,97370923,97370716,97370455,97370167,97369425,97367041,97366742,97366446,97366108,97363854,97360546,97358943,97358537,97356701	97426074,97401368,97400534,97396301,97393760,97390844,97390539,97388624,97388379,97385993,97385257,97381826,97381483,97380913,97379770,97379414,97373894,97373737,97373200,97372803,97372166,97371081,97370796,97370560,97370274,97369582,97367132,97366909,97366621,97366233,97363903,97360618,97359010,97358619,97357196	Gene ID= ENSG00000052749.13 TPM= 74.73 Transcript Type= protein_coding
chr10	97356701	97373593	97356701	97373593	-	ENST00000479481.5@RRP12	ENST00000479481.5	protein_coding	97373575,97373046,97372736,97370923,97370716,97370455,97370167,97369425,97367041,97366742,97366446,97366108,97363854,97360546,97358943,97358537,97356701	97373593,97373200,97372803,97372166,97370796,97370560,97370274,97369582,97367132,97366909,97366621,97366233,97363903,97360618,97359010,97358619,97357196	Gene ID= ENSG00000052749.13 TPM= 3.5 Transcript Type= processed_transcript
chr10	97426160	97433441	97426160	97433441	+	ENST00000334828.5@PGAM1	ENST00000334828.5	protein_coding	97426160,97430379,97430955,97432355	97426446,97430653,97431135,97433441	Gene ID= ENSG00000171314.8 TPM= 410.99 Transcript Type= protein_coding
chr10	97436142	97446017	97436142	97446017	-	ENST00000370902.7@EXOSC1	ENST00000370902.7	protein_coding	97445955,97445732,97443237,97441171,97438670,97437700,97437191,97436142	97446017,97445847,97443311,97441259,97438703,97437750,97437275,97436551	Gene ID= ENSG00000171311.12 TPM= 5.84 Transcript Type= protein_coding
chr10	97436142	97446011	97436142	97446011	-	transcript4532.chr10.nic@EXOSC1	transcript4532.chr10.nic	protein_coding	97445955,97443237,97441171,97438670,97437700,97437191,97436142	97446011,97445847,97441259,97438703,97437750,97437275,97436551	Gene ID= ENSG00000171311.12 TPM= 2.34 Transcript Type= NA
chr10	97446131	97457363	97446131	97457363	+	ENST00000393760.5@ZDHHC16	ENST00000393760.5	protein_coding	97446131,97450357,97451671,97452090,97452415,97452895,97453530,97453799,97454714,97455660,97455974,97456777	97446353,97450536,97451918,97452284,97452503,97452923,97453663,97453846,97454799,97455783,97456044,97457363	Gene ID= ENSG00000171307.18 TPM= 25.73 Transcript Type= protein_coding
chr10	97446142	97457366	97446142	97457366	+	transcript4563.chr10.nic@ZDHHC16	transcript4563.chr10.nic	protein_coding	97446142,97451671,97452090,97452415,97452895,97453530,97453799,97454714,97455714,97455974,97456777	97446353,97451918,97452284,97452503,97452923,97453663,97453846,97454799,97455783,97456044,97457366	Gene ID= ENSG00000171307.18 TPM= 10.89 Transcript Type= NA
chr10	97446159	97457366	97446159	97457366	+	transcript4575.chr10.nic@ZDHHC16	transcript4575.chr10.nic	protein_coding	97446159,97450357,97451671,97452090,97452415,97452895,97455602,97455974,97456777	97446353,97450536,97451918,97452284,97452503,97452923,97455783,97456044,97457366	Gene ID= ENSG00000171307.18 TPM= 9.97 Transcript Type= NA
chr10	97446170	97457366	97446170	97457366	+	ENST00000370854.7@ZDHHC16	ENST00000370854.7	protein_coding	97446170,97451671,97452090,97452415,97452895,97453530,97453799,97454714,97455660,97455974,97456777	97446353,97451918,97452284,97452503,97452923,97453663,97453846,97454799,97455783,97456044,97457366	Gene ID= ENSG00000171307.18 TPM= 80.95 Transcript Type= protein_coding
chr10	97446204	97457366	97446204	97457366	+	ENST00000353979.7@ZDHHC16	ENST00000353979.7	protein_coding	97446204,97451671,97452090,97452415,97453618,97453799,97454714,97455660,97455974,97456777	97446353,97451918,97452284,97452503,97453663,97453846,97454799,97455783,97456044,97457366	Gene ID= ENSG00000171307.18 TPM= 7.97 Transcript Type= protein_coding
chr10	97446202	97457366	97446202	97457366	+	ENST00000352634.8@ZDHHC16	ENST00000352634.8	protein_coding	97446202,97451671,97452090,97452415,97452895,97453530,97454714,97455660,97455974,97456777	97446353,97451918,97452284,97452503,97452923,97453663,97454799,97455783,97456044,97457366	Gene ID= ENSG00000171307.18 TPM= 19.65 Transcript Type= protein_coding
chr10	97458084	97459691	97458084	97459691	-	transcript4586.chr10.nnic@NA	transcript4586.chr10.nnic	NA	97458084	97459691	Gene ID= novel_gene_chr10_4587 TPM= 2.34 Transcript Type= NA
chr10	97458324	97498443	97458324	97498443	-	transcript4540.chr10.nic@MMS19	transcript4540.chr10.nic	protein_coding	97498273,97484103,97480942,97480241,97478304,97477855,97477347,97476835,97476683,97470775,97470129,97469646,97468966,97468252,97467505,97466776,97466504,97466059,97465805,97463858,97462583,97462017,97461828,97461496,97460907,97460695,97460046,97459659,97459362,97459223,97458800,97458324	97498443,97484151,97481042,97480357,97478389,97477929,97477416,97476963,97476744,97470861,97470203,97469723,97469104,97468406,97467583,97466901,97466585,97466159,97465954,97464013,97462682,97462119,97461896,97461622,97461007,97460751,97460232,97459741,97459526,97459282,97458900,97458719	Gene ID= ENSG00000155229.20 TPM= 12.55 Transcript Type= NA
chr10	97458324	97498720	97458324	97498720	-	ENST00000438925.6@MMS19	ENST00000438925.6	protein_coding	97498273,97484103,97480942,97478304,97477855,97477347,97476835,97476683,97470775,97470129,97469646,97468966,97468252,97467505,97466776,97466504,97466059,97465805,97463858,97462583,97462017,97461828,97461496,97460907,97460695,97460046,97459659,97459362,97459223,97458800,97458324	97498720,97484151,97481042,97478389,97477929,97477416,97476963,97476744,97470861,97470203,97469723,97469104,97468406,97467583,97466901,97466585,97466159,97465954,97464013,97462682,97462119,97461896,97461622,97461007,97460751,97460232,97459741,97459526,97459282,97458900,97458719	Gene ID= ENSG00000155229.20 TPM= 39.41 Transcript Type= protein_coding
chr10	97458324	97498443	97458324	97498443	-	transcript4552.chr10.nnic@MMS19	transcript4552.chr10.nnic	protein_coding	97498273,97484103,97480942,97478304,97477855,97476683,97470775,97470129,97469646,97468966,97468252,97467505,97466776,97466504,97466059,97465805,97463858,97462583,97462017,97461828,97460907,97460695,97460046,97459659,97459362,97459223,97458800,97458324	97498443,97484151,97481042,97478389,97477929,97477416,97470861,97470203,97469723,97469126,97468406,97467583,97466901,97466585,97466159,97465954,97464013,97462682,97462119,97461896,97461007,97460751,97460232,97459741,97459526,97459282,97458900,97458719	Gene ID= ENSG00000155229.20 TPM= 6.13 Transcript Type= NA
chr10	97458324	97498388	97458324	97498388	-	ENST00000415383.5@MMS19	ENST00000415383.5	protein_coding	97498273,97480942,97478304,97477855,97477347,97476835,97476683,97470775,97470129,97469646,97468966,97468252,97467505,97466776,97466504,97466059,97465805,97463858,97462583,97462017,97461828,97461496,97460907,97460695,97460046,97459659,97459362,97459223,97458800,97458324	97498388,97481042,97478389,97477929,97477404,97476963,97476744,97470861,97470203,97469723,97469104,97468406,97467583,97466901,97466585,97466156,97465954,97464013,97462682,97462119,97461896,97461622,97461007,97460751,97460232,97459741,97459526,97459282,97458900,97458719	Gene ID= ENSG00000155229.20 TPM= 10.8 Transcript Type= nonsense_mediated_decay
chr10	97460547	97461771	97460547	97461771	-	transcript4588.chr10.nnic@NA	transcript4588.chr10.nnic	NA	97460547	97461771	Gene ID= novel_gene_chr10_4589 TPM= 2.34 Transcript Type= NA
chr10	97498868	97571209	97498868	97571209	+	ENST00000370664.3@UBTD1	ENST00000370664.3	protein_coding	97498868,97567914,97570138	97499273,97568141,97571209	Gene ID= ENSG00000165886.4 TPM= 142.45 Transcript Type= protein_coding
chr10	97584343	97612802	97584343	97612802	+	ENST00000370646.8@HOGA1	ENST00000370646.8	protein_coding	97584343,97598775,97599089,97599680,97600067,97601857,97611510	97584914,97598903,97599216,97599814,97600163,97601990,97612802	Gene ID= ENSG00000241935.8 TPM= 2.34 Transcript Type= protein_coding
chr10	97584343	97612802	97584343	97612802	+	ENST00000370647.8@HOGA1	ENST00000370647.8	protein_coding	97584343,97601857,97611510	97584914,97601990,97612802	Gene ID= ENSG00000241935.8 TPM= 1.17 Transcript Type= protein_coding
chr10	97614553	97633495	97614553	97633495	-	transcript4598.chr10.nnic@MORN4	transcript4598.chr10.nnic	protein_coding	97633347,97617208,97616678,97614553	97633495,97617322,97616787,97616411	Gene ID= ENSG00000171160.17 TPM= 2.34 Transcript Type= NA
chr10	97614553	97633480	97614553	97633480	-	ENST00000307450.10@MORN4	ENST00000307450.10	protein_coding	97633347,97619587,97617208,97616678,97614553	97633480,97619683,97617322,97616787,97616411	Gene ID= ENSG00000171160.17 TPM= 10.51 Transcript Type= protein_coding
chr10	97640734	97676051	97640734	97676051	+	transcript4599.chr10.nnic@PI4K2A	transcript4599.chr10.nnic	protein_coding	97640734,97650941,97656285,97656821,97658441,97662907,97664885,97666438,97667061,97673581	97641177,97651141,97656416,97656974,97658579,97662968,97664984,97666571,97667120,97676051	Gene ID= ENSG00000155252.13 TPM= 4.67 Transcript Type= NA
chr10	97640686	97676434	97640686	97676434	+	ENST00000370631.3@PI4K2A	ENST00000370631.3	protein_coding	97640686,97650941,97656285,97656821,97662907,97664885,97666438,97667061,97673581	97641177,97651141,97656416,97656974,97662968,97664984,97666571,97667120,97676434	Gene ID= ENSG00000155252.13 TPM= 14.01 Transcript Type= protein_coding
chr10	97660302	97662869	97660302	97662869	-	transcript4613.chr10.nnic@NA	transcript4613.chr10.nnic	NA	97660302	97662869	Gene ID= novel_gene_chr10_4614 TPM= 2.34 Transcript Type= NA
chr10	97684499	97687221	97684499	97687221	-	transcript4611.chr10.nnic@NA	transcript4611.chr10.nnic	NA	97684499	97687221	Gene ID= novel_gene_chr10_4612 TPM= 8.17 Transcript Type= NA
chr10	97714432	97718144	97714432	97718144	+	transcript4621.chr10.nnic@MARVELD1	transcript4621.chr10.nnic	protein_coding	97714432,97716212,97717194	97715985,97716311,97718144	Gene ID= ENSG00000155254.12 TPM= 2.34 Transcript Type= NA
chr10	97713724	97718152	97713724	97718152	+	ENST00000285605.7@MARVELD1	ENST00000285605.7	protein_coding	97713724,97717194	97715985,97718152	Gene ID= ENSG00000155254.12 TPM= 161.13 Transcript Type= protein_coding
chr10	97737091	97760895	97737091	97760895	+	transcript4633.chr10.nic@ZFYVE27	transcript4633.chr10.nic	protein_coding	97737091,97738477,97743094,97744729,97748269,97749474,97750331,97751376,97753038,97757265,97757642,97759236	97737321,97738674,97743164,97744915,97748364,97749586,97750470,97751462,97753182,97757311,97757723,97760895	Gene ID= ENSG00000155256.17 TPM= 11.43 Transcript Type= NA
chr10	97737091	97760895	97737091	97760895	+	transcript4636.chr10.nnic@ZFYVE27	transcript4636.chr10.nnic	protein_coding	97737091,97738477,97743094,97744729,97748269,97750331,97751376,97752857,97753038,97757265,97757642,97759236	97737321,97738674,97743164,97744915,97748364,97750470,97751462,97752877,97753182,97757311,97757723,97760895	Gene ID= ENSG00000155256.17 TPM= 2.48 Transcript Type= NA
chr10	97737091	97760895	97737091	97760895	+	transcript4640.chr10.nnic@ZFYVE27	transcript4640.chr10.nnic	protein_coding	97737091,97738477,97744729,97748269,97749474,97750331,97751391,97753038,97757265,97757642,97759236	97737321,97738674,97744915,97748364,97749586,97750470,97751462,97753182,97757311,97757723,97760895	Gene ID= ENSG00000155256.17 TPM= 4.23 Transcript Type= NA
chr10	97737135	97760895	97737135	97760895	+	transcript4641.chr10.nnic@ZFYVE27	transcript4641.chr10.nnic	protein_coding	97737135,97743094,97744729,97748269,97749474,97750331,97751376,97753038,97757265,97757642,97759236	97737321,97743164,97744915,97748364,97749586,97750470,97751462,97753182,97757311,97757723,97760895	Gene ID= ENSG00000155256.17 TPM= 3.26 Transcript Type= NA
chr10	97737128	97760895	97737128	97760895	+	ENST00000423811.3@ZFYVE27	ENST00000423811.3	protein_coding	97737128,97738477,97743094,97744729,97748269,97749474,97750331,97751376,97752857,97753038,97757265,97757642,97759236	97737325,97738674,97743164,97744915,97748364,97749586,97750470,97751462,97752877,97753182,97757311,97757723,97760895	Gene ID= ENSG00000155256.17 TPM= 7.15 Transcript Type= protein_coding
chr10	97737121	97760906	97737121	97760906	+	ENST00000337540.11@ZFYVE27	ENST00000337540.11	protein_coding	97737121,97738477,97744729,97748269,97749474,97750331,97751391,97753038,97757265,97757642,97759236	97737321,97738649,97744915,97748364,97749586,97750470,97751462,97753182,97757311,97757723,97760906	Gene ID= ENSG00000155256.17 TPM= 4.23 Transcript Type= protein_coding
chr10	97737140	97760895	97737140	97760895	+	ENST00000359980.5@ZFYVE27	ENST00000359980.5	protein_coding	97737140,97738477,97743094,97744729,97748269,97749474,97750331,97751391,97753038,97757265,97757642,97759236	97737325,97738674,97743164,97744915,97748364,97749586,97750470,97751462,97753182,97757311,97757723,97760895	Gene ID= ENSG00000155256.17 TPM= 50.93 Transcript Type= protein_coding
chr10	97746053	97748109	97746053	97748109	-	transcript4648.chr10.nnic@NA	transcript4648.chr10.nnic	NA	97746053	97748109	Gene ID= novel_gene_chr10_4649 TPM= 2.34 Transcript Type= NA
chr10	97766751	97771952	97766751	97771952	-	ENST00000266066.3@SFRP5	ENST00000266066.3	protein_coding	97771305,97769668,97766751	97771952,97769745,97767860	Gene ID= ENSG00000120057.4 TPM= 9.34 Transcript Type= protein_coding
chr10	97854718	98030624	97854718	98030624	-	transcript4656.chr10.nnic@CRTAC1	transcript4656.chr10.nnic	protein_coding	98030449,98011138,97936170,97923264,97917500,97908013,97904669,97901503,97896909,97895885,97895245,97884206,97882786,97880249,97854718	98030624,98011337,97936366,97923400,97917656,97908147,97904814,97901639,97896991,97895985,97895413,97884351,97882828,97880392,97854941	Gene ID= ENSG00000095713.13 TPM= 24.05 Transcript Type= NA
chr10	97865000	98030828	97865000	98030828	-	ENST00000370597.7@CRTAC1	ENST00000370597.7	protein_coding	98030449,98011138,97936170,97923264,97917500,97908013,97904669,97901503,97896909,97895885,97895245,97884206,97882786,97880249,97865000	98030828,98011337,97936366,97923400,97917656,97908147,97904814,97901639,97896991,97895985,97895413,97884351,97882828,97880392,97865714	Gene ID= ENSG00000095713.13 TPM= 429.21 Transcript Type= protein_coding
chr10	97879629	98030828	97879629	98030828	-	ENST00000370591.6@CRTAC1	ENST00000370591.6	protein_coding	98030449,98011138,97936170,97923264,97917500,97908013,97904669,97901503,97896909,97895885,97895245,97884206,97882786,97880249,97879629	98030828,98011337,97936366,97923400,97917656,97908147,97904814,97901639,97896991,97895985,97895413,97884351,97882828,97880392,97879801	Gene ID= ENSG00000095713.13 TPM= 5.37 Transcript Type= protein_coding
chr10	98134635	98244894	98134635	98244894	+	transcript4671.chr10.nic@R3HCC1L	transcript4671.chr10.nic	protein_coding	98134635,98156093,98162883,98163293,98186467,98208101,98231512,98234446,98235425,98236024,98244091	98134706,98156147,98162975,98163397,98186563,98209899,98231687,98234516,98235520,98236164,98244894	Gene ID= ENSG00000166024.13 TPM= 3.5 Transcript Type= NA
chr10	98134638	98244894	98134638	98244894	+	transcript4677.chr10.nnic@R3HCC1L	transcript4677.chr10.nnic	protein_coding	98134638,98162883,98163293,98208101,98231512,98234446,98235425,98236024,98244091	98134706,98162975,98163397,98209899,98231687,98234516,98235520,98236164,98244894	Gene ID= ENSG00000166024.13 TPM= 5.84 Transcript Type= NA
chr10	98134671	98244897	98134671	98244897	+	ENST00000298999.7@R3HCC1L	ENST00000298999.7	protein_coding	98134671,98156093,98162883,98163293,98208101,98231512,98234446,98235425,98236024,98244091	98134706,98156147,98162975,98163397,98209899,98231687,98234516,98235520,98236164,98244897	Gene ID= ENSG00000166024.13 TPM= 14.01 Transcript Type= protein_coding
chr10	98136019	98140999	98136019	98140999	-	transcript4683.chr10.nnic@NA	transcript4683.chr10.nnic	NA	98136019	98140999	Gene ID= novel_gene_chr10_4684 TPM= 7.01 Transcript Type= NA
chr10	98247690	98268275	98247690	98268275	-	transcript4685.chr10.nnic@LOXL4	transcript4685.chr10.nnic	protein_coding	98268132,98267631,98262743,98262035,98260922,98259391,98259009,98257981,98257650,98256780,98255577,98253553,98252353,98251566,98251065,98247690	98268275,98267822,98263051,98262213,98261127,98259429,98259228,98258164,98257804,98256947,98255739,98253796,98252468,98251702,98251176,98248991	Gene ID= ENSG00000138131.3 TPM= 3.5 Transcript Type= NA
chr10	98247690	98268250	98247690	98268250	-	ENST00000260702.3@LOXL4	ENST00000260702.3	protein_coding	98268132,98262743,98262035,98260922,98259391,98259009,98257981,98257650,98256780,98255577,98253553,98252353,98251566,98251065,98247690	98268250,98263051,98262213,98261127,98259429,98259228,98258164,98257804,98256947,98255739,98253796,98252468,98251702,98251176,98248991	Gene ID= ENSG00000138131.3 TPM= 12.84 Transcript Type= protein_coding
chr10	98383565	98415184	98383565	98415184	-	ENST00000370575.4@PYROXD2	ENST00000370575.4	protein_coding	98415009,98410939,98407904,98407582,98400102,98397345,98395391,98395196,98392942,98392432,98391010,98390598,98388354,98387201,98384947,98383565	98415184,98410958,98407997,98407655,98400257,98397498,98395452,98395293,98393083,98392566,98391082,98390754,98388508,98387307,98385067,98383868	Gene ID= ENSG00000119943.12 TPM= 1.17 Transcript Type= protein_coding
chr10	98417015	98446952	98417015	98446952	-	transcript4706.chr10.nic@HPS1	transcript4706.chr10.nic	protein_coding	98446807,98445300,98443124,98435635,98433983,98431131,98430571,98429791,98429573,98427215,98425818,98425541,98424313,98423753,98423603,98422369,98420045,98418175,98417015	98446952,98445413,98443240,98435772,98434091,98431291,98430670,98429889,98429642,98427264,98425985,98425720,98424374,98423887,98423668,98422513,98420158,98418257,98417726	Gene ID= ENSG00000107521.18 TPM= 11.48 Transcript Type= NA
chr10	98417015	98446952	98417015	98446952	-	transcript4708.chr10.nic@HPS1	transcript4708.chr10.nic	protein_coding	98446807,98445300,98443124,98435635,98435272,98433983,98431131,98430571,98429573,98427215,98425818,98425541,98424313,98423753,98423603,98422369,98420045,98418175,98417015	98446952,98445413,98443240,98435772,98435414,98434091,98431291,98430670,98429642,98427264,98425985,98425720,98424374,98423887,98423668,98422513,98420158,98418257,98417726	Gene ID= ENSG00000107521.18 TPM= 12.84 Transcript Type= NA
chr10	98417015	98446952	98417015	98446952	-	transcript4712.chr10.nic@HPS1	transcript4712.chr10.nic	protein_coding	98446807,98445300,98443124,98435635,98433940,98430571,98429791,98429573,98427215,98425818,98425541,98424313,98423753,98423603,98422369,98420045,98418175,98417015	98446952,98445413,98443240,98435772,98434091,98430670,98429889,98429642,98427264,98425985,98425720,98424374,98423887,98423668,98422513,98420158,98418257,98417726	Gene ID= ENSG00000107521.18 TPM= 10.89 Transcript Type= NA
chr10	98417015	98446952	98417015	98446952	-	transcript4718.chr10.nic@HPS1	transcript4718.chr10.nic	protein_coding	98446807,98445300,98443124,98435635,98433940,98430571,98429573,98427215,98425818,98425541,98424313,98423753,98423603,98422369,98420045,98418175,98417015	98446952,98445413,98443240,98435772,98434091,98430670,98429642,98427264,98425985,98425720,98424374,98423887,98423668,98422513,98420158,98418257,98417726	Gene ID= ENSG00000107521.18 TPM= 9.34 Transcript Type= NA
chr10	98417015	98446887	98417015	98446887	-	ENST00000467246.5@HPS1	ENST00000467246.5	protein_coding	98446807,98445300,98443124,98435635,98435272,98433940,98431131,98430571,98429573,98427215,98425818,98425541,98424313,98423753,98423603,98422369,98420045,98418175,98417015	98446887,98445413,98443240,98435772,98435414,98434091,98431291,98430670,98429642,98427264,98425985,98425720,98424374,98423887,98423668,98422513,98420158,98418257,98417726	Gene ID= ENSG00000107521.18 TPM= 36.2 Transcript Type= processed_transcript
chr10	98429151	98446913	98429151	98446913	-	ENST00000338546.9@HPS1	ENST00000338546.9	protein_coding	98446807,98445300,98443124,98435635,98435272,98433983,98431131,98430571,98429791,98429151	98446913,98445413,98443240,98435772,98435414,98434091,98431291,98430670,98429889,98429642	Gene ID= ENSG00000107521.18 TPM= 2.92 Transcript Type= protein_coding
chr10	99396870	99430593	99396870	99430593	-	ENST00000370508.5@GOT1	ENST00000370508.5	protein_coding	99430448,99420624,99406726,99406137,99405756,99403724,99403469,99402580,99396870	99430593,99420805,99406849,99406249,99405860,99403874,99403634,99402722,99397686	Gene ID= ENSG00000120053.10 TPM= 16.35 Transcript Type= protein_coding
chr10	99429352	99430645	99429352	99430645	-	transcript4752.chr10.nnic@NA	transcript4752.chr10.nnic	NA	99429352	99430645	Gene ID= novel_gene_chr10_4753 TPM= 2.34 Transcript Type= NA
chr10	99532933	99536524	99532933	99536524	+	ENST00000344586.8@NKX2-3	ENST00000344586.8	protein_coding	99532933,99534985	99533489,99536524	Gene ID= ENSG00000119919.10 TPM= 1.17 Transcript Type= protein_coding
chr10	99532953	99536521	99532953	99536521	+	ENST00000622383.1@NKX2-3	ENST00000622383.1	protein_coding	99532953,99534985,99535526	99533489,99535437,99536521	Gene ID= ENSG00000119919.10 TPM= 1.17 Transcript Type= protein_coding
chr10	99610522	99620484	99610522	99620484	-	transcript4760.chr10.nnic@SLC25A28	transcript4760.chr10.nnic	protein_coding	99620045,99613733,99612543,99610522	99620484,99613924,99612599,99611366	Gene ID= ENSG00000155287.10 TPM= 6.42 Transcript Type= NA
chr10	99610522	99620484	99610522	99620484	-	transcript4766.chr10.nic@SLC25A28	transcript4766.chr10.nic	protein_coding	99620045,99612543,99610522	99620484,99613924,99611366	Gene ID= ENSG00000155287.10 TPM= 32.69 Transcript Type= NA
chr10	99610522	99620364	99610522	99620364	-	ENST00000370495.5@SLC25A28	ENST00000370495.5	protein_coding	99620045,99613696,99612543,99610522	99620364,99613924,99612599,99611366	Gene ID= ENSG00000155287.10 TPM= 12.26 Transcript Type= protein_coding
chr10	99732206	99755396	99732206	99755396	+	transcript4790.chr10.nic@CUTC	transcript4790.chr10.nic	protein_coding	99732206,99736246,99739710,99743153,99744037,99747257,99750369	99732409,99736317,99739769,99743362,99744072,99747390,99755396	Gene ID= ENSG00000119929.12 TPM= 2.34 Transcript Type= NA
chr10	99732220	99756134	99732220	99756134	+	ENST00000370476.9@CUTC	ENST00000370476.9	protein_coding	99732220,99736246,99739710,99743153,99744037,99747257,99750369,99754529,99755625	99732409,99736317,99739769,99743362,99744072,99747390,99750396,99754634,99756134	Gene ID= ENSG00000119929.12 TPM= 22.18 Transcript Type= protein_coding
chr10	99713515	99732100	99713515	99732100	-	ENST00000016171.5@COX15	ENST00000016171.5	protein_coding	99731960,99729553,99727441,99726968,99723956,99720987,99718346,99716348,99713515	99732100,99729734,99727563,99727154,99724123,99721068,99718500,99716461,99714718	Gene ID= ENSG00000014919.12 TPM= 3.5 Transcript Type= protein_coding
chr10	99875577	99930996	99875577	99930996	-	ENST00000636706.1@DNMBP	ENST00000636706.1	protein_coding	99929608,99908953,99907995,99899919,99898743,99898086,99896267,99894946,99888825,99886300,99885687,99884011,99879811,99875577	99930996,99909146,99908094,99900066,99898760,99898285,99896397,99895050,99888953,99886632,99885866,99884209,99880361,99877336	Gene ID= ENSG00000107554.16 TPM= 8.17 Transcript Type= protein_coding
chr10	99948019	99954123	99948019	99954123	+	transcript4797.chr10.nnic@NA	transcript4797.chr10.nnic	NA	99948019	99954123	Gene ID= novel_gene_chr10_4798 TPM= 3.5 Transcript Type= NA
chr10	100150094	100186032	100150094	100186032	-	transcript4800.chr10.nic@ERLIN1	transcript4800.chr10.nic	protein_coding	100185904,100185514,100183756,100179201,100178133,100175945,100174208,100167348,100164004,100156145,100154860,100150094	100186032,100185637,100183837,100179247,100178194,100176070,100174281,100167406,100164095,100156234,100154939,100152352	Gene ID= ENSG00000107566.13 TPM= 24.52 Transcript Type= NA
chr10	100188298	100229619	100188298	100229619	-	ENST00000370397.7@CHUK	ENST00000370397.7	protein_coding	100229428,100225923,100222866,100222112,100220588,100219270,100219008,100218718,100217995,100209595,100207230,100205076,100204506,100202088,100200671,100199971,100194425,100193984,100193298,100190869,100188298	100229619,100226017,100222980,100222181,100220676,100219359,100219132,100218825,100218130,100209789,100207332,100205199,100204657,100202149,100200780,100200020,100194521,100194131,100193431,100190968,100189627	Gene ID= ENSG00000213341.10 TPM= 4.67 Transcript Type= protein_coding
chr10	100189835	100229616	100189835	100229616	-	transcript4811.chr10.nic@CHUK	transcript4811.chr10.nic	protein_coding	100229428,100225923,100222866,100222112,100220588,100219270,100219008,100218718,100217995,100209595,100207230,100205076,100204506,100202088,100200671,100199971,100194425,100193984,100193298,100189835	100229616,100226017,100222980,100222181,100220676,100219359,100219132,100218825,100218130,100209789,100207332,100205199,100204657,100202149,100200780,100200020,100194521,100194131,100193431,100190968	Gene ID= ENSG00000213341.10 TPM= 4.67 Transcript Type= NA
chr10	100232298	100267716	100232298	100267716	-	transcript4817.chr10.nnic@CWF19L1	transcript4817.chr10.nnic	protein_coding	100267571,100261979,100260966,100260218,100256262,100253421,100250248,100246795,100245799,100243698,100238022,100235667,100232298	100267716,100262063,100261044,100260319,100256476,100253539,100250332,100246935,100245913,100243777,100238231,100235764,100233371	Gene ID= ENSG00000095485.17 TPM= 4.67 Transcript Type= NA
chr10	100274695	100286712	100274695	100286712	-	ENST00000370372.6@BLOC1S2	ENST00000370372.6	protein_coding	100286605,100286097,100280934,100280124,100274695	100286712,100286213,100281053,100280228,100275493	Gene ID= ENSG00000196072.11 TPM= 49.04 Transcript Type= protein_coding
chr10	100273956	100286357	100273956	100286357	-	ENST00000441611.5@BLOC1S2	ENST00000441611.5	protein_coding	100286097,100280934,100280124,100273956	100286357,100281053,100280228,100275493	Gene ID= ENSG00000196072.11 TPM= 2.34 Transcript Type= protein_coding
chr10	100347124	100364834	100347124	100364834	+	ENST00000370355.2@SCD	ENST00000370355.2	protein_coding	100347124,100348064,100352366,100354427,100356532,100360734	100347531,100348346,100352496,100354632,100356764,100364834	Gene ID= ENSG00000099194.5 TPM= 420.33 Transcript Type= protein_coding
chr10	100373544	100388218	100373544	100388218	+	transcript4844.chr10.nic@OLMALINC	transcript4844.chr10.nic	lincRNA	100373544,100381216,100388037	100374012,100381448,100388218	Gene ID= ENSG00000235823.2 TPM= 4.67 Transcript Type= NA
chr10	100373576	100382431	100373576	100382431	+	transcript4845.chr10.nic@OLMALINC	transcript4845.chr10.nic	lincRNA	100373576,100380983,100381216	100374012,100381109,100382431	Gene ID= ENSG00000235823.2 TPM= 7.01 Transcript Type= NA
chr10	100523743	100530000	100523743	100530000	-	ENST00000370322.5@NDUFB8	ENST00000370322.5	protein_coding	100529858,100529380,100526975,100526399,100523743	100530000,100529506,100527074,100526554,100523929	Gene ID= ENSG00000166136.15 TPM= 4.67 Transcript Type= protein_coding
chr10	100523740	100529864	100523740	100529864	-	ENST00000299166.8@NDUFB8	ENST00000299166.8	protein_coding	100529767,100529380,100526975,100526399,100523740	100529864,100529506,100527074,100526554,100523929	Gene ID= ENSG00000166136.15 TPM= 103.92 Transcript Type= protein_coding
chr10	100535859	100559998	100535859	100559998	+	ENST00000299163.6@HIF1AN	ENST00000299163.6	protein_coding	100535859,100536411,100540634,100544951,100545943,100546518,100547140,100548093	100536135,100536661,100540782,100545096,100546049,100546581,100547250,100559998	Gene ID= ENSG00000166135.13 TPM= 10.51 Transcript Type= protein_coding
chr10	100912569	100965136	100912569	100965136	+	ENST00000238961.8@SLF2	ENST00000238961.8	protein_coding	100912569,100915999,100916570,100918384,100923975,100925949,100929317,100929830,100930976,100937402,100938595,100944026,100945330,100947039,100947760,100950076,100950676,100956451,100959428,100961877	100913250,100916042,100917300,100918441,100924972,100926019,100929439,100929997,100931078,100937477,100938736,100944128,100945506,100947136,100947847,100950207,100950753,100956537,100959496,100965136	Gene ID= ENSG00000119906.11 TPM= 21.02 Transcript Type= protein_coding
chr10	100912996	100913886	100912996	100913886	+	ENST00000609386.1@SLF2	ENST00000609386.1	protein_coding	100912996	100913886	Gene ID= ENSG00000119906.11 TPM= 3.5 Transcript Type= protein_coding
chr10	100981377	100987515	100981377	100987515	-	ENST00000342071.5@MRPL43	ENST00000342071.5	protein_coding	100987313,100987090,100986749,100983948,100983755,100981377	100987515,100987196,100986975,100984074,100983817,100981543	Gene ID= ENSG00000055950.16 TPM= 1.17 Transcript Type= protein_coding
chr10	100981376	100987494	100981376	100987494	-	ENST00000299179.9@MRPL43	ENST00000299179.9	protein_coding	100987313,100987090,100986749,100983755,100981376	100987494,100987196,100986975,100983817,100981543	Gene ID= ENSG00000055950.16 TPM= 1.17 Transcript Type= protein_coding
chr10	100981376	100987433	100981376	100987433	-	ENST00000448244.5@MRPL43	ENST00000448244.5	protein_coding	100987313,100987090,100986749,100984034,100983755,100981376	100987433,100987196,100986975,100984074,100983817,100981543	Gene ID= ENSG00000055950.16 TPM= 2.34 Transcript Type= protein_coding
chr10	100986276	100987515	100986276	100987515	-	ENST00000318364.12@MRPL43	ENST00000318364.12	protein_coding	100987313,100987090,100986276	100987515,100987196,100986975	Gene ID= ENSG00000055950.16 TPM= 50.21 Transcript Type= protein_coding
chr10	100986276	100987286	100986276	100987286	-	ENST00000493646.1@MRPL43	ENST00000493646.1	protein_coding	100987090,100986276	100987286,100986975	Gene ID= ENSG00000055950.16 TPM= 3.5 Transcript Type= processed_transcript
chr10	100999296	101007836	100999296	101007836	+	transcript4889.chr10.nic@LZTS2	transcript4889.chr10.nic	protein_coding	100999296,101002497,101003507,101005458,101006485	100999952,101002946,101004166,101005715,101007836	Gene ID= ENSG00000107816.17 TPM= 169.22 Transcript Type= NA
chr10	100999741	101007836	100999741	101007836	+	transcript4892.chr10.nic@LZTS2	transcript4892.chr10.nic	protein_coding	100999741,101002497,101003507,101006485	100999952,101002946,101005715,101007836	Gene ID= ENSG00000107816.17 TPM= 18.21 Transcript Type= NA
chr10	100997072	101007836	100997072	101007836	+	ENST00000370223.7@LZTS2	ENST00000370223.7	protein_coding	100997072,101002497,101003507,101005458,101006485	100997234,101002946,101004166,101005715,101007836	Gene ID= ENSG00000107816.17 TPM= 82.82 Transcript Type= protein_coding
chr10	101031239	101041240	101031239	101041240	+	transcript4901.chr10.nic@SFXN3	transcript4901.chr10.nic	protein_coding	101031239,101032314,101034692,101035497,101036003,101036486,101036667,101037076,101037382,101038643,101039175,101039489	101031534,101032482,101034855,101035667,101036101,101036561,101036808,101037203,101037431,101038692,101039222,101041240	Gene ID= ENSG00000107819.13 TPM= 14.01 Transcript Type= NA
chr10	101067017	101067997	101067017	101067997	-	transcript4907.chr10.nnic@NA	transcript4907.chr10.nnic	NA	101067017	101067997	Gene ID= novel_gene_chr10_4908 TPM= 2.34 Transcript Type= NA
chr10	101354063	101557321	101354063	101557321	+	ENST00000370187.7@BTRC	ENST00000370187.7	protein_coding	101354063,101430345,101461981,101479368,101521639,101526013,101531237,101532295,101532952,101534661,101535354,101536543,101538293,101550699,101553155	101354228,101430452,101462058,101479457,101521870,101526199,101531333,101532432,101533070,101534910,101535472,101536653,101538371,101550891,101557321	Gene ID= ENSG00000166167.17 TPM= 7.01 Transcript Type= protein_coding
chr10	101354033	101557319	101354033	101557319	+	ENST00000393441.8@BTRC	ENST00000393441.8	protein_coding	101354033,101430345,101479368,101521639,101526013,101531237,101532295,101532952,101534661,101535354,101536543,101538293,101550699,101553155	101354228,101430452,101479457,101521870,101526199,101531333,101532432,101533070,101534910,101535472,101536653,101538371,101550891,101557319	Gene ID= ENSG00000166167.17 TPM= 3.5 Transcript Type= protein_coding
chr10	101354107	101557321	101354107	101557321	+	ENST00000408038.6@BTRC	ENST00000408038.6	protein_coding	101354107,101461981,101479368,101521639,101526013,101531237,101532295,101532952,101534661,101535354,101536543,101538293,101550699,101553155	101354228,101462058,101479457,101521870,101526199,101531333,101532432,101533070,101534910,101535472,101536653,101538371,101550891,101557321	Gene ID= ENSG00000166167.17 TPM= 3.5 Transcript Type= protein_coding
chr10	101578884	101588270	101578884	101588270	-	ENST00000370162.7@POLL	ENST00000370162.7	protein_coding	101587822,101587246,101585862,101585316,101584602,101583508,101582763,101580248,101578884	101588270,101587406,101586156,101585478,101584919,101583681,101582891,101580416,101579817	Gene ID= ENSG00000166169.16 TPM= 4.44 Transcript Type= protein_coding
chr10	101578882	101588252	101578882	101588252	-	transcript4922.chr10.nic@POLL	transcript4922.chr10.nic	protein_coding	101588204,101587246,101585862,101585316,101584602,101583508,101582763,101580248,101578882	101588252,101587406,101586156,101585478,101584919,101583681,101582891,101580416,101579817	Gene ID= ENSG00000166169.16 TPM= 5.31 Transcript Type= NA
chr10	101578882	101588252	101578882	101588252	-	transcript4923.chr10.nic@POLL	transcript4923.chr10.nic	protein_coding	101588204,101587246,101585862,101585316,101584878,101583508,101582763,101580248,101578882	101588252,101587406,101586156,101585478,101584919,101583681,101582891,101580416,101579817	Gene ID= ENSG00000166169.16 TPM= 3.56 Transcript Type= NA
chr10	101578882	101582225	101578882	101582225	-	ENST00000463515.1@POLL	ENST00000463515.1	protein_coding	101580248,101578882	101582225,101579817	Gene ID= ENSG00000166169.16 TPM= 2.39 Transcript Type= processed_transcript
chr10	101578882	101588209	101578882	101588209	-	ENST00000299206.8@POLL	ENST00000299206.8	protein_coding	101587885,101587246,101585862,101585316,101584602,101583508,101582763,101580248,101578882	101588209,101587406,101586156,101585478,101584919,101583681,101582891,101580416,101579817	Gene ID= ENSG00000166169.16 TPM= 2.98 Transcript Type= protein_coding
chr10	101581812	101585253	101581812	101585253	-	transcript4933.chr10.nnic@NA	transcript4933.chr10.nnic	NA	101581812	101585253	Gene ID= novel_gene_chr10_4934 TPM= 2.34 Transcript Type= NA
chr10	101588288	101609668	101588288	101609668	+	ENST00000370151.8@DPCD	ENST00000370151.8	protein_coding	101588288,101594658,101600738,101601203,101608835,101609367	101588400,101594738,101600862,101601336,101608937,101609668	Gene ID= ENSG00000166171.12 TPM= 7.01 Transcript Type= protein_coding
chr10	101610666	101695181	101610666	101695181	-	transcript4938.chr10.nnic@FBXW4	transcript4938.chr10.nnic	protein_coding	101694381,101676341,101673488,101672915,101624745,101612337,101611628,101610666	101695181,101676436,101673673,101673047,101624810,101612477,101611769,101611410	Gene ID= ENSG00000107829.13 TPM= 7.59 Transcript Type= NA
chr10	101657232	101695379	101657232	101695379	-	transcript4940.chr10.nnic@FBXW4	transcript4940.chr10.nnic	protein_coding	101694381,101676341,101673488,101672915,101667886,101657232	101695379,101676436,101673673,101673047,101667980,101657632	Gene ID= ENSG00000107829.13 TPM= 4.67 Transcript Type= NA
chr10	101610666	101695259	101610666	101695259	-	ENST00000331272.7@FBXW4	ENST00000331272.7	protein_coding	101694381,101676341,101673488,101672915,101667886,101624745,101612337,101611628,101610666	101695259,101676436,101673673,101673047,101667980,101624810,101612477,101611769,101611410	Gene ID= ENSG00000107829.13 TPM= 71.81 Transcript Type= protein_coding
chr10	101784443	101818447	101784443	101818447	-	transcript4948.chr10.nic@MGEA5	transcript4948.chr10.nic	protein_coding	101817824,101813555,101813030,101810184,101807730,101806045,101803735,101800242,101798842,101797980,101792839,101791354,101790896,101787364,101784443	101818447,101813606,101813127,101810314,101807901,101806143,101804019,101800400,101799455,101798154,101792943,101791439,101791088,101787523,101786587	Gene ID= ENSG00000198408.13 TPM= 9.34 Transcript Type= NA
chr10	101784443	101818418	101784443	101818418	-	ENST00000361464.7@MGEA5	ENST00000361464.7	protein_coding	101817824,101813555,101813030,101810184,101807730,101806045,101803735,101800242,101798842,101797980,101793913,101792839,101791354,101790896,101787364,101784443	101818418,101813606,101813127,101810314,101807901,101806143,101804019,101800400,101799455,101798154,101793998,101792943,101791439,101791088,101787523,101786587	Gene ID= ENSG00000198408.13 TPM= 19.85 Transcript Type= protein_coding
chr10	101797046	101818418	101797046	101818418	-	ENST00000370094.7@MGEA5	ENST00000370094.7	protein_coding	101817824,101813555,101813030,101810184,101807730,101806045,101803735,101800242,101798842,101797046	101818418,101813606,101813127,101810314,101807901,101806143,101804019,101800400,101799455,101798154	Gene ID= ENSG00000198408.13 TPM= 9.34 Transcript Type= protein_coding
chr10	101845599	102056193	101845599	102056193	-	ENST00000370033.8@C10orf76	ENST00000370033.8	protein_coding	102056085,102040013,102033283,102033026,102029638,102025156,102023675,102023477,102013968,102012833,102011723,102009977,102009374,102006540,102001971,101995297,101993538,101991969,101990551,101975212,101957650,101956597,101939863,101889412,101849776,101845599	102056193,102040125,102033339,102033172,102029745,102025248,102023749,102023563,102014024,102012876,102011783,102010023,102009449,102006633,102002072,101995355,101993603,101992038,101990611,101975300,101957732,101956723,101939938,101889490,101849892,101847620	Gene ID= ENSG00000120029.12 TPM= 23.35 Transcript Type= protein_coding
chr10	102029448	102056193	102029448	102056193	-	ENST00000311122.5@C10orf76	ENST00000311122.5	protein_coding	102056085,102040013,102033283,102033026,102029448	102056193,102040125,102033339,102033172,102029745	Gene ID= ENSG00000120029.12 TPM= 2.34 Transcript Type= protein_coding
chr10	102065390	102068038	102065390	102068038	+	ENST00000299238.6@HPS6	ENST00000299238.6	protein_coding	102065390	102068038	Gene ID= ENSG00000166189.7 TPM= 96.91 Transcript Type= protein_coding
chr10	102106492	102120492	102106492	102120492	-	transcript4974.chr10.nnic@LDB1	transcript4974.chr10.nnic	protein_coding	102120086,102111434,102111256,102111069,102110869,102110529,102109921,102109600,102109384,102109035,102106492	102120492,102111536,102111300,102111144,102110971,102110701,102110043,102109683,102109507,102109177,102108323	Gene ID= ENSG00000198728.10 TPM= 8.17 Transcript Type= NA
chr10	102106492	102120445	102106492	102120445	-	transcript4977.chr10.nic@LDB1	transcript4977.chr10.nic	protein_coding	102120086,102111434,102111256,102111069,102110869,102110529,102109921,102109600,102109384,102106492	102120445,102111536,102111300,102111144,102110971,102110701,102110043,102109683,102109507,102109177	Gene ID= ENSG00000198728.10 TPM= 7.01 Transcript Type= NA
chr10	102107583	102120453	102107583	102120453	-	ENST00000425280.1@LDB1	ENST00000425280.1	protein_coding	102120086,102111434,102111256,102111069,102110869,102110529,102109921,102109600,102109384,102109029,102107583	102120453,102111536,102111300,102111144,102110971,102110701,102110043,102109683,102109507,102109177,102108323	Gene ID= ENSG00000198728.10 TPM= 19.85 Transcript Type= protein_coding
chr10	102132994	102150331	102132994	102150331	+	ENST00000413464.6@PPRC1	ENST00000413464.6	protein_coding	102132994,102137850,102138619,102138879,102139100,102143045,102144250,102148372,102148628,102148817,102149178,102149926	102133221,102138038,102138765,102138980,102142004,102143098,102144307,102148521,102148694,102148938,102149329,102150331	Gene ID= ENSG00000148840.10 TPM= 11.68 Transcript Type= protein_coding
chr10	102133030	102150325	102133030	102150325	+	ENST00000278070.6@PPRC1	ENST00000278070.6	protein_coding	102133030,102137850,102138619,102138879,102139100,102143045,102144250,102145020,102146672,102148372,102148628,102148817,102149178,102149926	102133221,102138038,102138765,102138980,102142004,102143098,102144307,102145090,102147392,102148521,102148694,102148938,102149329,102150325	Gene ID= ENSG00000148840.10 TPM= 12.84 Transcript Type= protein_coding
chr10	102152176	102163866	102152176	102163866	+	ENST00000605788.5@NOLC1	ENST00000605788.5	protein_coding	102152176,102157019,102157189,102157431,102158049,102159193,102159433,102159896,102160233,102160452,102161556,102161833,102162111	102152530,102157074,102157328,102157555,102158214,102159308,102159568,102160024,102160343,102161093,102161662,102161925,102163866	Gene ID= ENSG00000166197.16 TPM= 27.44 Transcript Type= protein_coding
chr10	102152176	102163871	102152176	102163871	+	ENST00000405356.5@NOLC1	ENST00000405356.5	protein_coding	102152176,102157019,102157189,102157431,102158049,102159193,102159433,102159896,102160233,102160452,102161556,102161833,102162111	102152530,102157074,102157328,102157555,102158214,102159338,102159568,102160024,102160343,102161093,102161662,102161925,102163871	Gene ID= ENSG00000166197.16 TPM= 9.92 Transcript Type= protein_coding
chr10	102152404	102162600	102152404	102162600	+	ENST00000488254.6@NOLC1	ENST00000488254.6	protein_coding	102152404,102157019,102157186,102157431,102158049,102159193,102159433,102159896,102160233,102160452,102161556,102161833,102162111	102152530,102157074,102157328,102157555,102158214,102159308,102159568,102160024,102160343,102161093,102161662,102161925,102162600	Gene ID= ENSG00000166197.16 TPM= 4.67 Transcript Type= protein_coding
chr10	102245532	102382899	102245532	102382899	+	ENST00000369983.3@GBF1	ENST00000369983.3	protein_coding	102245532,102258929,102260050,102344051,102351256,102351843,102352458,102353600,102358039,102358506,102359270,102360184,102361022,102361718,102362475,102363256,102363710,102365397,102366383,102367085,102367478,102368218,102368739,102369211,102369711,102369861,102370174,102370384,102370707,102375359,102376272,102376560,102376935,102379284,102379521,102379853,102380249,102380506,102381127,102382056	102245781,102259034,102260116,102344182,102351374,102351951,102352518,102353654,102358186,102358729,102359435,102360395,102361120,102361912,102362664,102363396,102363798,102365599,102366506,102367210,102367560,102368454,102368832,102369387,102369775,102369984,102370245,102370478,102370860,102375584,102376432,102376800,102377140,102379434,102379651,102379954,102380362,102380686,102381255,102382899	Gene ID= ENSG00000107862.4 TPM= 42.03 Transcript Type= protein_coding
chr10	102394110	102402529	102394110	102402529	+	ENST00000428099.5@NFKB2	ENST00000428099.5	protein_coding	102394110,102395888,102396253,102396449,102396725,102396904,102397302,102397527,102397981,102398212,102398385,102398739,102399288,102399577,102400080,102400278,102400655,102400947,102401180,102401449,102401745,102402048,102402255	102394600,102395980,102396334,102396489,102396823,102397055,102397408,102397685,102398085,102398297,102398523,102398864,102399497,102399718,102400194,102400491,102400824,102401049,102401331,102401518,102401917,102402159,102402529	Gene ID= ENSG00000077150.18 TPM= 35.81 Transcript Type= protein_coding
chr10	102395749	102402524	102395749	102402524	+	transcript5013.chr10.nic@NFKB2	transcript5013.chr10.nic	protein_coding	102395749,102396253,102396449,102396725,102396904,102397302,102397527,102397981,102398212,102398385,102398739,102399288,102399577,102400080,102400278,102400655,102400947,102401180,102401449,102401745,102402048,102402255	102395980,102396334,102396489,102396823,102397055,102397408,102397685,102398085,102398297,102398523,102398864,102399497,102399718,102400194,102400491,102400824,102401049,102401331,102401518,102401917,102402159,102402524	Gene ID= ENSG00000077150.18 TPM= 12.46 Transcript Type= NA
chr10	102395706	102402524	102395706	102402524	+	ENST00000189444.10@NFKB2	ENST00000189444.10	protein_coding	102395706,102395888,102396253,102396449,102396725,102396904,102397302,102397527,102397981,102398212,102398385,102398739,102399288,102399577,102400080,102400278,102400655,102400947,102401180,102401449,102401745,102402048,102402255	102395796,102395980,102396334,102396489,102396823,102397055,102397408,102397685,102398085,102398297,102398523,102398864,102399497,102399718,102400194,102400491,102400824,102401049,102401331,102401518,102401917,102402159,102402524	Gene ID= ENSG00000077150.18 TPM= 13.63 Transcript Type= protein_coding
chr10	102402619	102416947	102402619	102416947	-	transcript5021.chr10.nic@PSD	transcript5021.chr10.nic	protein_coding	102416385,102416017,102414863,102413769,102412381,102412147,102411707,102411058,102410858,102407223,102405346,102405183,102404898,102404583,102403842,102402619	102416947,102416119,102415229,102414197,102412575,102412227,102411819,102411116,102410947,102407266,102405536,102405253,102405055,102404727,102403985,102403430	Gene ID= ENSG00000059915.16 TPM= 4.67 Transcript Type= NA
chr10	102420813	102423136	102420813	102423136	+	transcript5026.chr10.nic@FBXL15	transcript5026.chr10.nic	protein_coding	102420813,102421052,102421354,102421787,102422804	102420957,102421182,102421507,102422292,102423136	Gene ID= ENSG00000107872.12 TPM= 25.49 Transcript Type= NA
chr10	102421182	102423136	102421182	102423136	+	transcript5028.chr10.nic@FBXL15	transcript5028.chr10.nic	protein_coding	102421182,102421787,102422804	102421507,102422292,102423136	Gene ID= ENSG00000107872.12 TPM= 18.48 Transcript Type= NA
chr10	102421180	102423136	102421180	102423136	+	transcript5030.chr10.nic@FBXL15	transcript5030.chr10.nic	protein_coding	102421180,102422804	102422292,102423136	Gene ID= ENSG00000107872.12 TPM= 31.91 Transcript Type= NA
chr10	102423245	102432587	102423245	102432587	-	transcript5036.chr10.nic@CUEDC2	transcript5036.chr10.nic	protein_coding	102432526,102425115,102424649,102424499,102423798,102423657,102423245	102432587,102425198,102424792,102424560,102424394,102423717,102423572	Gene ID= ENSG00000107874.10 TPM= 5.25 Transcript Type= NA
chr10	102423245	102432661	102423245	102432661	-	ENST00000369937.4@CUEDC2	ENST00000369937.4	protein_coding	102432526,102425115,102424649,102424499,102424264,102423996,102423798,102423657,102423245	102432661,102425198,102424792,102424560,102424394,102424178,102423859,102423717,102423572	Gene ID= ENSG00000107874.10 TPM= 83.48 Transcript Type= protein_coding
chr10	102449816	102456297	102449816	102456297	+	transcript5068.chr10.nnic@RPARP-AS1	transcript5068.chr10.nnic	processed_transcript	102449816,102450187,102451399,102455335	102450022,102450330,102451551,102456297	Gene ID= ENSG00000269609.5 TPM= 7.68 Transcript Type= NA
chr10	102449816	102456293	102449816	102456293	+	transcript5069.chr10.nnic@RPARP-AS1	transcript5069.chr10.nnic	processed_transcript	102449816,102450187,102452066,102455337	102450022,102450330,102452187,102456293	Gene ID= ENSG00000269609.5 TPM= 5.35 Transcript Type= NA
chr10	102449816	102456293	102449816	102456293	+	transcript5074.chr10.nnic@RPARP-AS1	transcript5074.chr10.nnic	processed_transcript	102449816,102452090,102455337	102450330,102452187,102456293	Gene ID= ENSG00000269609.5 TPM= 5.35 Transcript Type= NA
chr10	102449816	102456293	102449816	102456293	+	transcript5077.chr10.nic@RPARP-AS1	transcript5077.chr10.nic	processed_transcript	102449816,102455337	102452187,102456293	Gene ID= ENSG00000269609.5 TPM= 14.01 Transcript Type= NA
chr10	102453840	102456292	102453840	102456292	+	ENST00000598368.1@RPARP-AS1	ENST00000598368.1	processed_transcript	102453840	102456292	Gene ID= ENSG00000269609.5 TPM= 4.67 Transcript Type= retained_intron
chr10	102449831	102456297	102449831	102456297	+	ENST00000473970.2@RPARP-AS1	ENST00000473970.2	processed_transcript	102449831,102450187,102455337	102450022,102450330,102456297	Gene ID= ENSG00000269609.5 TPM= 24.81 Transcript Type= lincRNA
chr10	102449837	102451543	102449837	102451543	-	ENST00000625129.1@C10orf95	ENST00000625129.1	protein_coding	102451386,102449837	102451543,102451147	Gene ID= ENSG00000120055.7 TPM= 1.17 Transcript Type= protein_coding
chr10	102461395	102477045	102461395	102477045	+	ENST00000238936.8@MFSD13A	ENST00000238936.8	protein_coding	102461395,102465982,102468955,102469993,102470665,102471273,102472854,102473570,102473819,102475722	102461450,102466087,102469197,102470075,102471117,102471396,102472950,102473741,102474012,102477045	Gene ID= ENSG00000138111.14 TPM= 5.25 Transcript Type= protein_coding
chr10	102470140	102477045	102470140	102477045	+	transcript5066.chr10.nic@MFSD13A	transcript5066.chr10.nic	protein_coding	102470140,102472854,102473570,102473819,102475722	102471396,102472950,102473741,102474012,102477045	Gene ID= ENSG00000138111.14 TPM= 4.09 Transcript Type= NA
chr10	102479229	102502722	102479229	102502722	-	transcript5046.chr10.nic@ACTR1A	transcript5046.chr10.nic	protein_coding	102502600,102489063,102488150,102485609,102484160,102483011,102482001,102481837,102481132,102479229	102502722,102489138,102488275,102485733,102484376,102483103,102482175,102481898,102481172,102480965	Gene ID= ENSG00000138107.12 TPM= 11.68 Transcript Type= NA
chr10	102479229	102502711	102479229	102502711	-	ENST00000369905.8@ACTR1A	ENST00000369905.8	protein_coding	102502600,102490549,102489063,102488150,102485609,102484160,102483011,102482001,102481837,102481132,102479229	102502711,102490613,102489138,102488275,102485733,102484376,102483103,102482175,102481898,102481172,102480965	Gene ID= ENSG00000138107.12 TPM= 294.23 Transcript Type= protein_coding
chr10	102479670	102483556	102479670	102483556	+	transcript5081.chr10.nnic@NA	transcript5081.chr10.nnic	NA	102479670	102483556	Gene ID= novel_gene_chr10_5082 TPM= 4.67 Transcript Type= NA
chr10	102503949	102630752	102503949	102630752	+	transcript5083.chr10.nnic@SUFU	transcript5083.chr10.nnic	protein_coding	102503949,102509169,102549970,102592582,102593631,102593993,102597140,102599433,102615268,102617290,102627175,102630066	102504334,102509303,102550106,102592718,102593721,102594065,102597293,102599544,102615402,102617428,102627243,102630752	Gene ID= ENSG00000107882.11 TPM= 3.5 Transcript Type= NA
chr10	102630441	102633457	102630441	102633457	+	transcript5103.chr10.nnic@NA	transcript5103.chr10.nnic	NA	102630441	102633457	Gene ID= novel_gene_chr10_5104 TPM= 12.84 Transcript Type= NA
chr10	102710634	102712477	102710634	102712477	+	transcript5109.chr10.nnic@NA	transcript5109.chr10.nnic	NA	102710634	102712477	Gene ID= novel_gene_chr10_5110 TPM= 2.34 Transcript Type= NA
chr10	102743970	102816240	102743970	102816240	+	ENST00000448841.5@WBP1L	ENST00000448841.5	protein_coding	102743970,102797993,102809893,102812595	102744143,102798095,102810054,102816240	Gene ID= ENSG00000166272.16 TPM= 30.36 Transcript Type= protein_coding
chr10	102757889	102760895	102757889	102760895	-	transcript5122.chr10.nnic@NA	transcript5122.chr10.nnic	NA	102757889	102760895	Gene ID= novel_gene_chr10_5123 TPM= 5.84 Transcript Type= NA
chr10	102830531	102837533	102830531	102837533	-	ENST00000369887.3@CYP17A1	ENST00000369887.3	protein_coding	102837065,102835254,102834785,102834036,102832993,102832511,102831508,102830531	102837533,102835392,102835014,102834122,102833208,102832680,102831611,102830985	Gene ID= ENSG00000148795.6 TPM= 1.17 Transcript Type= protein_coding
chr10	102854223	102864961	102854223	102864961	+	ENST00000339834.9@BORCS7	ENST00000339834.9	protein_coding	102854223,102860332,102860498,102862160,102862873	102854427,102860394,102860541,102862180,102864961	Gene ID= ENSG00000166275.15 TPM= 1.17 Transcript Type= protein_coding
chr10	102869516	102901894	102869516	102901894	+	ENST00000615257.1@AS3MT	ENST00000615257.1	protein_coding	102869516,102869805,102870084,102872448,102873097,102874592,102876954,102878379,102878849,102890544,102890656,102900593,102901475	102869593,102869845,102870211,102872598,102873233,102874661,102877035,102878510,102878991,102890654,102890678,102900799,102901894	Gene ID= ENSG00000214435.7 TPM= 1.17 Transcript Type= protein_coding
chr10	102918293	102927605	102918293	102927605	+	transcript5144.chr10.nnic@CNNM2	transcript5144.chr10.nnic	protein_coding	102918293,102921027,102927345	102920101,102921115,102927605	Gene ID= ENSG00000148842.17 TPM= 3.5 Transcript Type= NA
chr10	102918317	102927618	102918317	102927618	+	ENST00000369875.3@CNNM2	ENST00000369875.3	protein_coding	102918317,102927345	102920101,102927618	Gene ID= ENSG00000148842.17 TPM= 1.17 Transcript Type= protein_coding
chr10	103078299	103083393	103078299	103083393	+	transcript5147.chr10.nnic@NA	transcript5147.chr10.nnic	NA	103078299	103083393	Gene ID= novel_gene_chr10_5148 TPM= 8.17 Transcript Type= NA
chr10	103088018	103193315	103088018	103193315	-	transcript5155.chr10.nnic@NT5C2	transcript5155.chr10.nnic	protein_coding	103193236,103181185,103174858,103139406,103106589,103105706,103101235,103101045,103099926,103098931,103097291,103095939,103094348,103093972,103093139,103091564,103090936,103090611,103088018	103193315,103181328,103174982,103139479,103106706,103105801,103101326,103101102,103100019,103098984,103097374,103095980,103094455,103094038,103093309,103091615,103090996,103090787,103089908	Gene ID= ENSG00000076685.18 TPM= 4.67 Transcript Type= NA
chr10	103088155	103176793	103088155	103176793	-	transcript5157.chr10.nnic@NT5C2	transcript5157.chr10.nnic	protein_coding	103176486,103174858,103139406,103106589,103105706,103101235,103101045,103100752,103099926,103098931,103097291,103095939,103094348,103093972,103093139,103091564,103090936,103090611,103088155	103176793,103174982,103139479,103106706,103105801,103101326,103101102,103100943,103100019,103098984,103097374,103095980,103094455,103094038,103093309,103091615,103090996,103090787,103089908	Gene ID= ENSG00000076685.18 TPM= 2.34 Transcript Type= NA
chr10	103088155	103193315	103088155	103193315	-	transcript5159.chr10.nnic@NT5C2	transcript5159.chr10.nnic	protein_coding	103193236,103181231,103174858,103139406,103106589,103105706,103101235,103101045,103099926,103098931,103097291,103095939,103094348,103093972,103093139,103091564,103090936,103090611,103088155	103193315,103181328,103174982,103139479,103106706,103105801,103101326,103101102,103100019,103098984,103097374,103095980,103094455,103094038,103093309,103091615,103090996,103090787,103089908	Gene ID= ENSG00000076685.18 TPM= 3.5 Transcript Type= NA
chr10	103088155	103153581	103088155	103153581	-	transcript5160.chr10.nnic@NT5C2	transcript5160.chr10.nnic	protein_coding	103153291,103139406,103111745,103106589,103105706,103101235,103101045,103099926,103098931,103097291,103095939,103094348,103093972,103093139,103091564,103090936,103090611,103088155	103153581,103139479,103111805,103106706,103105801,103101326,103101102,103100019,103098984,103097374,103095980,103094455,103094038,103093309,103091615,103090996,103090787,103089908	Gene ID= ENSG00000076685.18 TPM= 2.34 Transcript Type= NA
chr10	103192921	103195207	103192921	103195207	+	transcript5172.chr10.nnic@NA	transcript5172.chr10.nnic	NA	103192921	103195207	Gene ID= novel_gene_chr10_5173 TPM= 2.34 Transcript Type= NA
chr10	103302796	103351091	103302796	103351091	-	transcript5178.chr10.nnic@PCGF6	transcript5178.chr10.nnic	protein_coding	103350707,103348900,103348716,103345024,103333925,103326534,103314186,103302796	103351091,103348999,103348812,103345132,103333952,103326632,103314272,103303961	Gene ID= ENSG00000156374.14 TPM= 2.34 Transcript Type= NA
chr10	103302796	103351134	103302796	103351134	-	ENST00000369847.3@PCGF6	ENST00000369847.3	protein_coding	103350707,103348900,103348716,103347395,103347238,103345024,103333925,103326534,103314186,103302796	103351134,103348999,103348812,103347450,103347297,103345132,103333952,103326632,103314272,103303961	Gene ID= ENSG00000156374.14 TPM= 23.35 Transcript Type= protein_coding
chr10	103367967	103389065	103367967	103389065	+	ENST00000369839.3@TAF5	ENST00000369839.3	protein_coding	103367967,103373358,103378235,103379608,103379884,103381721,103383238,103385326,103387175,103387521,103388006	103368548,103373595,103378550,103379771,103380019,103381841,103383367,103385490,103387352,103387698,103389065	Gene ID= ENSG00000148835.10 TPM= 17.51 Transcript Type= protein_coding
chr10	103389050	103396454	103389050	103396454	-	transcript5191.chr10.nnic@USMG5	transcript5191.chr10.nnic	protein_coding	103396298,103392371,103392191,103389050	103396454,103392466,103392283,103389166	Gene ID= ENSG00000173915.14 TPM= 2.63 Transcript Type= NA
chr10	103389050	103396466	103389050	103396466	-	ENST00000309579.7@USMG5	ENST00000309579.7	protein_coding	103396409,103392371,103392191,103389050	103396466,103392466,103392283,103389166	Gene ID= ENSG00000173915.14 TPM= 89.03 Transcript Type= protein_coding
chr10	103389050	103396441	103389050	103396441	-	ENST00000369815.5@USMG5	ENST00000369815.5	protein_coding	103396409,103395746,103392371,103392191,103389050	103396441,103396032,103392466,103392283,103389166	Gene ID= ENSG00000173915.14 TPM= 4.96 Transcript Type= protein_coding
chr10	103389050	103396466	103389050	103396466	-	ENST00000337003.4@USMG5	ENST00000337003.4	protein_coding	103396409,103394199,103392371,103392191,103389050	103396466,103394394,103392466,103392283,103389166	Gene ID= ENSG00000173915.14 TPM= 1.46 Transcript Type= protein_coding
chr10	103396648	103446292	103396648	103446292	+	ENST00000369797.7@PDCD11	ENST00000369797.7	protein_coding	103396648,103398416,103400397,103403118,103405022,103405985,103406609,103409699,103413116,103413966,103414270,103415005,103416491,103417792,103418440,103419538,103421348,103422988,103423543,103424984,103427329,103432129,103433948,103434248,103434798,103438015,103438686,103439746,103440290,103440734,103441826,103442213,103443165,103443915,103444517,103445378	103396730,103398528,103400528,103403285,103405183,103406108,103406790,103409806,103413322,103414090,103414330,103415151,103416742,103417932,103418634,103419708,103421567,103423137,103423658,103425525,103427391,103432234,103434037,103434350,103434975,103438071,103438808,103439868,103440581,103440850,103441975,103442460,103443333,103444068,103444682,103446292	Gene ID= ENSG00000148843.13 TPM= 37.36 Transcript Type= protein_coding
chr10	103446786	103452402	103446786	103452402	-	ENST00000369788.7@CALHM2	ENST00000369788.7	protein_coding	103452156,103451083,103449387,103446786	103452402,103451182,103450099,103447568	Gene ID= ENSG00000138172.10 TPM= 22.88 Transcript Type= protein_coding
chr10	103446786	103452421	103446786	103452421	-	transcript5205.chr10.nic@CALHM2	transcript5205.chr10.nic	protein_coding	103452156,103451083,103449387,103446786	103452421,103451285,103450800,103447568	Gene ID= ENSG00000138172.10 TPM= 6.54 Transcript Type= NA
chr10	103446789	103452421	103446789	103452421	-	transcript5207.chr10.nnic@CALHM2	transcript5207.chr10.nnic	protein_coding	103452156,103451083,103449400,103446789	103452421,103451182,103450099,103447568	Gene ID= ENSG00000138172.10 TPM= 7.59 Transcript Type= NA
chr10	103446789	103452421	103446789	103452421	-	transcript5208.chr10.nnic@CALHM2	transcript5208.chr10.nnic	protein_coding	103452156,103451083,103449400,103446789	103452421,103451285,103450099,103447568	Gene ID= ENSG00000138172.10 TPM= 6.42 Transcript Type= NA
chr10	103446789	103452421	103446789	103452421	-	transcript5210.chr10.nnic@CALHM2	transcript5210.chr10.nnic	protein_coding	103452156,103451083,103449400,103446789	103452421,103451182,103450800,103447568	Gene ID= ENSG00000138172.10 TPM= 3.5 Transcript Type= NA
chr10	103446786	103452408	103446786	103452408	-	transcript5213.chr10.nic@CALHM2	transcript5213.chr10.nic	protein_coding	103451083,103449387,103446786	103452408,103450099,103447568	Gene ID= ENSG00000138172.10 TPM= 6.54 Transcript Type= NA
chr10	103446786	103452408	103446786	103452408	-	transcript5214.chr10.nnic@CALHM2	transcript5214.chr10.nnic	protein_coding	103452156,103449387,103446786	103452408,103450099,103447568	Gene ID= ENSG00000138172.10 TPM= 5.37 Transcript Type= NA
chr10	103446789	103452318	103446789	103452318	-	ENST00000260743.9@CALHM2	ENST00000260743.9	protein_coding	103452156,103451083,103449387,103446789	103452318,103451285,103450099,103447568	Gene ID= ENSG00000138172.10 TPM= 5.37 Transcript Type= protein_coding
chr10	103631484	103633753	103631484	103633753	+	transcript5223.chr10.nnic@NA	transcript5223.chr10.nnic	NA	103631484	103633753	Gene ID= novel_gene_chr10_5224 TPM= 11.68 Transcript Type= NA
chr10	103662388	103666189	103662388	103666189	-	transcript5225.chr10.nnic@NA	transcript5225.chr10.nnic	NA	103662388	103666189	Gene ID= novel_gene_chr10_5226 TPM= 12.84 Transcript Type= NA
chr10	103877568	103882300	103877568	103882300	-	transcript5245.chr10.nnic@NA	transcript5245.chr10.nnic	NA	103877568	103882300	Gene ID= novel_gene_chr10_5246 TPM= 4.67 Transcript Type= NA
chr10	103882542	103918205	103882542	103918205	-	ENST00000224950.7@STN1	ENST00000224950.7	protein_coding	103918100,103917462,103910527,103905091,103900062,103898877,103897548,103892130,103889072,103882542	103918205,103917656,103910622,103905156,103900223,103899000,103897719,103892252,103889144,103882841	Gene ID= ENSG00000107960.10 TPM= 30.36 Transcript Type= protein_coding
chr10	103967201	104029233	103967201	104029233	+	ENST00000335753.8@SLK	ENST00000335753.8	protein_coding	103967201,103990675,103992598,103992984,103998899,103999119,103999867,104001444,104002172,104005561,104005912,104008177,104018160,104018784,104019734,104020488,104021620,104025574	103967895,103990839,103992646,103993133,103998971,103999313,103999948,104001572,104003527,104005691,104006035,104008356,104018289,104018908,104019922,104020613,104021733,104029233	Gene ID= ENSG00000065613.13 TPM= 12.84 Transcript Type= protein_coding
chr10	103967201	104029233	103967201	104029233	+	ENST00000369755.3@SLK	ENST00000369755.3	protein_coding	103967201,103990675,103992598,103992984,103998899,103999119,103999867,104001444,104002172,104005561,104005912,104008177,104010816,104018160,104018784,104019734,104020488,104021620,104025574	103967895,103990839,103992646,103993133,103998971,103999313,103999948,104001572,104003527,104005691,104006035,104008356,104010908,104018289,104018908,104019922,104020613,104021733,104029233	Gene ID= ENSG00000065613.13 TPM= 2.34 Transcript Type= protein_coding
chr10	104031286	104086002	104031286	104086002	-	ENST00000353479.9@COL17A1	ENST00000353479.9	protein_coding	104085723,104080622,104078542,104077422,104076301,104074184,104073210,104072032,104070426,104064438,104063747,104062258,104061405,104060119,104059638,104058146,104056975,104055782,104055372,104054981,104054092,104053920,104053031,104052155,104051481,104050848,104050621,104050089,104049409,104048069,104047739,104046747,104045758,104043825,104043501,104042420,104041485,104041303,104041065,104040351,104039973,104039608,104039445,104039071,104038406,104037636,104037045,104036492,104035474,104035263,104034621,104033945,104033238,104032906,104032674,104031286	104086002,104080684,104078586,104077526,104076429,104074231,104073245,104072079,104070569,104064596,104063818,104062329,104061473,104060280,104059718,104058190,104057172,104056003,104055401,104055007,104054118,104053982,104053135,104052217,104051516,104050901,104050656,104050124,104049471,104048104,104047810,104046773,104045793,104043860,104043581,104042455,104041538,104041344,104041118,104040410,104039999,104039640,104039519,104039121,104038528,104037773,104037113,104036632,104035563,104035373,104034767,104034334,104033375,104032968,104032754,104032290	Gene ID= ENSG00000065618.18 TPM= 3.5 Transcript Type= protein_coding
chr10	104122165	104126385	104122165	104126385	+	ENST00000369727.3@SFR1	ENST00000369727.3	protein_coding	104122165,104122965,104123714,104125513	104122196,104123086,104124124,104126385	Gene ID= ENSG00000156384.14 TPM= 3.5 Transcript Type= protein_coding
chr10	104122058	104126385	104122058	104126385	+	ENST00000369729.7@SFR1	ENST00000369729.7	protein_coding	104122058,104122965,104123714,104125513	104122154,104123086,104124124,104126385	Gene ID= ENSG00000156384.14 TPM= 15.18 Transcript Type= protein_coding
chr10	104254735	104267457	104254735	104267457	+	ENST00000369713.9@GSTO1	ENST00000369713.9	protein_coding	104254735,104255163,104259576,104262979,104266084,104267252	104254962,104255271,104259798,104263077,104266190,104267457	Gene ID= ENSG00000148834.12 TPM= 95.74 Transcript Type= protein_coding
chr10	104269181	104299411	104269181	104299411	+	ENST00000338595.6@GSTO2	ENST00000338595.6	protein_coding	104269181,104274685,104275226,104277894,104279370,104297578,104299128	104269269,104274949,104275334,104278116,104279471,104297684,104299411	Gene ID= ENSG00000065621.14 TPM= 4.67 Transcript Type= protein_coding
chr10	104312131	104338404	104312131	104338404	-	ENST00000337478.2@ITPRIP	ENST00000337478.2	protein_coding	104338246,104312131	104338404,104316064	Gene ID= ENSG00000148841.15 TPM= 46.7 Transcript Type= protein_coding
chr10	104321705	104326396	104321705	104326396	-	transcript5282.chr10.nnic@NA	transcript5282.chr10.nnic	NA	104321705	104326396	Gene ID= novel_gene_chr10_5283 TPM= 7.01 Transcript Type= NA
chr10	104329250	104335943	104329250	104335943	+	transcript5280.chr10.nnic@NA	transcript5280.chr10.nnic	NA	104329250	104335943	Gene ID= novel_gene_chr10_5281 TPM= 14.01 Transcript Type= NA
chr10	109864766	109923553	109864766	109923553	-	ENST00000502935.5@XPNPEP1	ENST00000502935.5	protein_coding	109923402,109915011,109907691,109893012,109891722,109888503,109888049,109886246,109884067,109882432,109880842,109880188,109878000,109877790,109875528,109873367,109871792,109870731,109869953,109868614,109864766	109923553,109915099,109907815,109893075,109891826,109888595,109888192,109886341,109884148,109882642,109880931,109880238,109878058,109877867,109875599,109873427,109871861,109870904,109870029,109868712,109865312	Gene ID= ENSG00000108039.17 TPM= 58.61 Transcript Type= protein_coding
chr10	109864766	109923458	109864766	109923458	-	transcript5291.chr10.nic@XPNPEP1	transcript5291.chr10.nic	protein_coding	109923402,109907691,109893012,109891722,109888503,109888049,109886246,109884067,109882432,109880842,109880188,109878000,109877790,109875528,109873367,109871792,109870731,109869953,109868614,109864766	109923458,109907815,109893075,109891826,109888595,109888192,109886341,109884148,109882642,109880931,109880238,109878058,109877867,109875599,109873427,109871861,109870904,109870029,109868712,109865312	Gene ID= ENSG00000108039.17 TPM= 3.74 Transcript Type= NA
chr10	109864766	109923513	109864766	109923513	-	transcript5292.chr10.nic@XPNPEP1	transcript5292.chr10.nic	protein_coding	109923402,109915011,109907691,109893012,109891722,109888503,109888049,109886246,109884067,109882432,109880842,109880188,109878000,109875528,109873367,109871792,109870731,109869953,109868614,109864766	109923513,109915099,109907815,109893075,109891826,109888595,109888192,109886341,109884148,109882642,109880931,109880238,109878058,109877867,109873427,109871861,109870904,109870029,109868712,109865312	Gene ID= ENSG00000108039.17 TPM= 7.24 Transcript Type= NA
chr10	109864766	109923455	109864766	109923455	-	transcript5293.chr10.nnic@XPNPEP1	transcript5293.chr10.nnic	protein_coding	109923402,109915011,109907691,109893012,109891722,109888503,109888049,109886246,109884067,109882432,109880842,109880188,109878000,109877790,109875528,109873367,109871792,109869953,109868614,109864766	109923455,109915099,109907815,109893075,109891826,109888595,109888192,109886341,109884148,109882642,109880931,109880238,109878058,109877867,109875599,109873427,109871861,109870029,109868712,109865312	Gene ID= ENSG00000108039.17 TPM= 2.34 Transcript Type= NA
chr10	109864766	109923513	109864766	109923513	-	transcript5295.chr10.nic@XPNPEP1	transcript5295.chr10.nic	protein_coding	109923402,109915011,109907691,109888503,109888049,109886246,109884067,109882432,109880842,109880188,109878000,109877790,109875528,109873367,109871792,109870731,109869953,109868614,109864766	109923513,109915099,109907815,109888595,109888192,109886341,109884148,109882642,109880931,109880238,109878058,109877867,109875599,109873427,109871861,109870904,109870029,109868712,109865312	Gene ID= ENSG00000108039.17 TPM= 5.49 Transcript Type= NA
chr10	109864766	109923442	109864766	109923442	-	transcript5297.chr10.nnic@XPNPEP1	transcript5297.chr10.nnic	protein_coding	109923402,109915011,109907691,109893012,109888503,109886246,109884067,109882432,109880842,109880188,109878000,109877790,109875528,109873367,109871792,109870731,109869953,109868614,109864766	109923442,109915099,109907815,109893075,109888595,109886341,109884148,109882642,109880931,109880238,109878058,109877867,109875599,109873427,109871861,109870904,109870029,109868712,109865312	Gene ID= ENSG00000108039.17 TPM= 3.15 Transcript Type= NA
chr10	110007939	110134330	110007939	110134330	+	transcript5303.chr10.nic@ADD3	transcript5303.chr10.nic	protein_coding	110007939,110100625,110106000,110112777,110116259,110117342,110118587,110119211,110119466,110122110,110124017,110125826,110126417,110130363,110133326	110008299,110100848,110106053,110112915,110116410,110117422,110118736,110119354,110119564,110122292,110124274,110125945,110126503,110130486,110134330	Gene ID= ENSG00000148700.14 TPM= 6.13 Transcript Type= NA
chr10	110005804	110134330	110005804	110134330	+	ENST00000360162.7@ADD3	ENST00000360162.7	protein_coding	110005804,110100625,110112777,110116259,110117342,110118587,110119211,110119466,110122110,110124017,110125826,110126417,110130363,110133326	110006151,110100848,110112915,110116410,110117422,110118736,110119354,110119564,110122292,110124274,110125945,110126503,110130486,110134330	Gene ID= ENSG00000148700.14 TPM= 10.51 Transcript Type= protein_coding
chr10	110007964	110135565	110007964	110135565	+	ENST00000277900.12@ADD3	ENST00000277900.12	protein_coding	110007964,110100625,110112777,110116259,110117342,110118587,110119211,110119466,110122110,110124017,110125826,110126417,110130363,110133326	110008299,110100848,110112915,110116410,110117422,110118736,110119354,110119564,110122292,110124274,110125945,110126503,110130486,110135565	Gene ID= ENSG00000148700.14 TPM= 36.49 Transcript Type= protein_coding
chr10	110225993	110286506	110225993	110286506	+	ENST00000239007.11@MXI1	ENST00000239007.11	protein_coding	110225993,110228189,110244828,110279180,110279914,110284824	110226283,110228321,110244857,110279294,110280085,110286506	Gene ID= ENSG00000119950.20 TPM= 11.68 Transcript Type= protein_coding
chr10	110293042	110304963	110293042	110304963	-	transcript5342.chr10.nic@SMNDC1	transcript5342.chr10.nic	protein_coding	110304748,110303468,110297567,110295228,110293042	110304963,110303587,110298790,110295381,110294287	Gene ID= ENSG00000119953.12 TPM= 4.67 Transcript Type= NA
chr10	110497838	110511544	110497838	110511544	+	ENST00000369583.3@DUSP5	ENST00000369583.3	protein_coding	110497838,110502721,110506935,110510020	110498500,110502869,110507154,110511544	Gene ID= ENSG00000138166.5 TPM= 61.88 Transcript Type= protein_coding
chr10	110497908	110511544	110497908	110511544	+	transcript5347.chr10.nnic@DUSP5	transcript5347.chr10.nnic	protein_coding	110497908,110506935,110510020	110498500,110507154,110511544	Gene ID= ENSG00000138166.5 TPM= 2.34 Transcript Type= NA
chr10	110497898	110506274	110497898	110506274	+	transcript5348.chr10.nic@DUSP5	transcript5348.chr10.nic	protein_coding	110497898,110502721	110498500,110506274	Gene ID= ENSG00000138166.5 TPM= 3.5 Transcript Type= NA
chr10	110567691	110604636	110567691	110604636	+	ENST00000361804.4@SMC3	ENST00000361804.4	protein_coding	110567691,110568938,110573707,110575336,110577421,110577835,110578628,110580904,110581923,110582562,110583384,110583841,110584183,110589605,110589892,110590412,110590991,110593073,110596398,110598139,110599654,110600439,110601022,110601637,110601966,110602474,110602825,110603184,110604231	110567831,110569013,110573745,110575403,110577492,110577914,110578706,110581021,110582098,110582642,110583548,110583962,110584396,110589708,110589991,110590572,110591132,110593223,110596550,110598290,110599812,110600546,110601130,110601884,110602178,110602665,110603002,110603290,110604636	Gene ID= ENSG00000108055.9 TPM= 124.93 Transcript Type= protein_coding
chr10	110871795	110900005	110871795	110900005	+	ENST00000393104.6@PDCD4	ENST00000393104.6	protein_coding	110871795,110875966,110876670,110881233,110883003,110885253,110887665,110889533,110890556,110894091,110894412,110895948,110898028	110872018,110876070,110876753,110881535,110883097,110885366,110887886,110889630,110890670,110894198,110894522,110896087,110900005	Gene ID= ENSG00000150593.17 TPM= 1.75 Transcript Type= protein_coding
chr10	110871807	110900006	110871807	110900006	+	ENST00000280154.11@PDCD4	ENST00000280154.11	protein_coding	110871807,110875966,110881233,110883003,110885253,110887665,110889533,110890556,110894091,110894412,110895948,110898028	110872018,110876070,110881535,110883097,110885366,110887886,110889630,110890670,110894198,110894522,110896087,110900006	Gene ID= ENSG00000150593.17 TPM= 43.78 Transcript Type= protein_coding
chr10	110871883	110898718	110871883	110898718	+	transcript5365.chr10.nic@PDCD4	transcript5365.chr10.nic	protein_coding	110871883,110875966,110881275,110883003,110885253,110887665,110889533,110890556,110894091,110894412,110895948,110898028	110872018,110876070,110881535,110883097,110885366,110887886,110889630,110890670,110894198,110894522,110896087,110898718	Gene ID= ENSG00000150593.17 TPM= 2.34 Transcript Type= NA
chr10	110899956	110919201	110899956	110919201	-	ENST00000447005.5@BBIP1	ENST00000447005.5	protein_coding	110919121,110901538,110899956	110919201,110901612,110900526	Gene ID= ENSG00000214413.7 TPM= 1.17 Transcript Type= protein_coding
chr10	110900229	110919157	110900229	110919157	-	ENST00000436562.1@BBIP1	ENST00000436562.1	protein_coding	110919121,110901538,110900229	110919157,110901585,110900526	Gene ID= ENSG00000214413.7 TPM= 1.17 Transcript Type= protein_coding
chr10	110919547	111013667	110919547	111013667	+	ENST00000369452.8@SHOC2	ENST00000369452.8	protein_coding	110919547,110964125,110985628,111000415,111004606,111007531,111009248,111009713,111011610	110919657,110965061,110985765,111000545,111004794,111007653,111009385,111009830,111013667	Gene ID= ENSG00000108061.11 TPM= 64.8 Transcript Type= protein_coding
chr10	110919566	111013664	110919566	111013664	+	transcript5379.chr10.nnic@SHOC2	transcript5379.chr10.nnic	protein_coding	110919566,110985628,111000415,111004606,111007531,111009248,111009713,111011610	110919657,110985765,111000545,111004794,111007653,111009385,111009830,111013664	Gene ID= ENSG00000108061.11 TPM= 7.59 Transcript Type= NA
chr10	110930737	110939460	110930737	110939460	-	transcript5383.chr10.nnic@NA	transcript5383.chr10.nnic	NA	110930737	110939460	Gene ID= novel_gene_chr10_5384 TPM= 8.17 Transcript Type= NA
chr10	110936591	110941297	110936591	110941297	-	transcript5381.chr10.nnic@NA	transcript5381.chr10.nnic	NA	110936591	110941297	Gene ID= novel_gene_chr10_5382 TPM= 11.68 Transcript Type= NA
chr10	111077008	111080794	111077008	111080794	+	transcript5385.chr10.nnic@NA	transcript5385.chr10.nnic	NA	111077008	111080794	Gene ID= novel_gene_chr10_5386 TPM= 4.67 Transcript Type= NA
chr10	112149864	112183763	112149864	112183763	-	ENST00000348367.8@GPAM	ENST00000348367.8	protein_coding	112183693,112182794,112181683,112180473,112177984,112175600,112173699,112172970,112172182,112168853,112168312,112166402,112164525,112163701,112161667,112160604,112159911,112158316,112157249,112155864,112154629,112149864	112183763,112182891,112181813,112180595,112178057,112175713,112173845,112173066,112172318,112168952,112168524,112166515,112164610,112163816,112161737,112160868,112160053,112158393,112157389,112156053,112154687,112153666	Gene ID= ENSG00000119927.13 TPM= 3.5 Transcript Type= protein_coding
chr10	112374018	112428376	112374018	112428376	+	ENST00000354655.8@ACSL5	ENST00000354655.8	protein_coding	112374018,112394918,112398901,112404511,112404705,112408422,112409507,112410463,112410584,112411456,112411902,112413173,112416888,112417846,112421593,112421947,112422325,112425338,112426258,112426788,112427218	112374269,112395102,112399009,112404575,112404806,112408521,112409685,112410495,112410635,112411529,112411979,112413307,112417022,112417941,112421665,112422035,112422441,112425481,112426359,112426859,112428376	Gene ID= ENSG00000197142.10 TPM= 45.56 Transcript Type= protein_coding
chr10	112375265	112428379	112375265	112428379	+	ENST00000393081.5@ACSL5	ENST00000393081.5	protein_coding	112375265,112394918,112398901,112404511,112404705,112408422,112409507,112410463,112410584,112411456,112411902,112413173,112416888,112417846,112421593,112421947,112422325,112425338,112426258,112426788,112427218	112375542,112395102,112399009,112404575,112404806,112408521,112409685,112410495,112410635,112411529,112411979,112413307,112417022,112417941,112421665,112422035,112422441,112425481,112426359,112426859,112428379	Gene ID= ENSG00000197142.10 TPM= 15.2 Transcript Type= protein_coding
chr10	112376199	112428380	112376199	112428380	+	ENST00000354273.4@ACSL5	ENST00000354273.4	protein_coding	112376199,112394918,112398901,112404511,112404705,112408422,112409507,112410463,112410584,112411456,112411902,112413173,112416888,112417846,112421593,112421947,112422325,112425338,112426258,112426788,112427218	112376448,112395102,112399009,112404575,112404806,112408521,112409685,112410495,112410635,112411529,112411979,112413307,112417022,112417941,112421665,112422035,112422441,112425481,112426359,112426859,112428380	Gene ID= ENSG00000197142.10 TPM= 69.3 Transcript Type= protein_coding
chr10	112430300	112446938	112430300	112446938	-	transcript5419.chr10.nnic@ZDHHC6	transcript5419.chr10.nnic	protein_coding	112446767,112445170,112443515,112442192,112440534,112438336,112434297,112433240,112432376,112432240,112430300	112446938,112445650,112443606,112442351,112440695,112438389,112434464,112433281,112432521,112432286,112430907	Gene ID= ENSG00000023041.11 TPM= 2.34 Transcript Type= NA
chr10	112430300	112446955	112430300	112446955	-	transcript5423.chr10.nic@ZDHHC6	transcript5423.chr10.nic	protein_coding	112446705,112445170,112443515,112442192,112440534,112438336,112433240,112432376,112432240,112430300	112446955,112445650,112443606,112442351,112440695,112438389,112434464,112432521,112432286,112430907	Gene ID= ENSG00000023041.11 TPM= 3.5 Transcript Type= NA
chr10	112430300	112446914	112430300	112446914	-	ENST00000369405.7@ZDHHC6	ENST00000369405.7	protein_coding	112446705,112445170,112443515,112442192,112440534,112438336,112434297,112433240,112432376,112432240,112430300	112446914,112445650,112443606,112442351,112440695,112438389,112434464,112433281,112432521,112432286,112430907	Gene ID= ENSG00000023041.11 TPM= 43.2 Transcript Type= protein_coding
chr10	112430724	112446901	112430724	112446901	-	ENST00000369404.3@ZDHHC6	ENST00000369404.3	protein_coding	112446705,112445170,112443515,112442192,112440534,112438336,112434297,112433240,112432376,112432240,112430724	112446901,112445650,112443594,112442351,112440695,112438389,112434464,112433281,112432521,112432286,112430907	Gene ID= ENSG00000023041.11 TPM= 1.17 Transcript Type= protein_coding
chr10	112447258	112737784	112447258	112737784	+	ENST00000432306.5@VTI1A	ENST00000432306.5	protein_coding	112447258,112460524,112464547,112527087,112538246,112668218,112668937,112736723	112447467,112460582,112464657,112527164,112538330,112668288,112668998,112737784	Gene ID= ENSG00000151532.13 TPM= 2.34 Transcript Type= protein_coding
chr10	112822992	112827734	112822992	112827734	+	transcript5431.chr10.nnic@NA	transcript5431.chr10.nnic	NA	112822992	112827734	Gene ID= novel_gene_chr10_5432 TPM= 5.84 Transcript Type= NA
chr10	112830851	112832844	112830851	112832844	-	transcript5433.chr10.nnic@NA	transcript5433.chr10.nnic	NA	112830851	112832844	Gene ID= novel_gene_chr10_5434 TPM= 3.5 Transcript Type= NA
chr10	112950250	113167678	112950250	113167678	+	ENST00000538897.5@TCF7L2	ENST00000538897.5	protein_coding	112950250,112951207,112951483,112964556,113040025,113141184,113143923,113146011,113150998,113151725,113152333,113158021,113158667,113165555	112950945,112951273,112951607,112964624,113040126,113141316,113144025,113146097,113151123,113151884,113152440,113158069,113158717,113167678	Gene ID= ENSG00000148737.16 TPM= 52.54 Transcript Type= protein_coding
chr10	113082133	113084382	113082133	113084382	-	transcript5443.chr10.nnic@NA	transcript5443.chr10.nnic	NA	113082133	113084382	Gene ID= novel_gene_chr10_5444 TPM= 3.5 Transcript Type= NA
chr10	113085228	113090849	113085228	113090849	-	transcript5445.chr10.nnic@NA	transcript5445.chr10.nnic	NA	113085228	113090849	Gene ID= novel_gene_chr10_5446 TPM= 4.67 Transcript Type= NA
chr10	113482491	113492246	113482491	113492246	-	transcript5448.chr10.nnic@NA	transcript5448.chr10.nnic	NA	113491993,113482491	113492246,113485617	Gene ID= novel_gene_chr10_5449 TPM= 5.84 Transcript Type= NA
chr10	113553026	113589599	113553026	113589599	+	ENST00000351270.3@HABP2	ENST00000351270.3	protein_coding	113553026,113567489,113574289,113575897,113577150,113578026,113578627,113580595,113581876,113583216,113584148,113585793,113588205	113553190,113567525,113574405,113576004,113577266,113578145,113578798,113580692,113582131,113583358,113584282,113585938,113589599	Gene ID= ENSG00000148702.14 TPM= 1.17 Transcript Type= protein_coding
chr10	113679669	113730907	113679669	113730907	+	ENST00000614447.4@CASP7	ENST00000614447.4	protein_coding	113679669,113697494,113721032,113721651,113725362,113725817,113726305,113729311	113679978,113697603,113721168,113721779,113725429,113725890,113726434,113730907	Gene ID= ENSG00000165806.19 TPM= 1.95 Transcript Type= protein_coding
chr10	113679162	113730907	113679162	113730907	+	ENST00000621345.4@CASP7	ENST00000621345.4	protein_coding	113679162,113697494,113721032,113721651,113725362,113726305,113729311	113679349,113697603,113721168,113721779,113725537,113726434,113730907	Gene ID= ENSG00000165806.19 TPM= 13.04 Transcript Type= protein_coding
chr10	113679877	113730903	113679877	113730903	+	ENST00000369318.7@CASP7	ENST00000369318.7	protein_coding	113679877,113697494,113721032,113721651,113725362,113726305,113729311	113679978,113697603,113721168,113721779,113725537,113726434,113730903	Gene ID= ENSG00000165806.19 TPM= 34.06 Transcript Type= protein_coding
chr10	113834725	113854100	113834725	113854100	-	ENST00000361384.6@DCLRE1A	ENST00000361384.6	protein_coding	113852723,113848980,113847202,113845685,113844104,113842343,113841406,113837062,113834725	113854100,113850644,113847335,113845803,113844244,113842488,113841560,113837203,113835312	Gene ID= ENSG00000198924.7 TPM= 4.09 Transcript Type= protein_coding
chr10	113834729	113854383	113834729	113854383	-	ENST00000369305.1@DCLRE1A	ENST00000369305.1	protein_coding	113854354,113852723,113848980,113847202,113845685,113844104,113842343,113841406,113837062,113834729	113854383,113853847,113850644,113847335,113845803,113844244,113842488,113841560,113837203,113835312	Gene ID= ENSG00000198924.7 TPM= 7.59 Transcript Type= protein_coding
chr10	113854626	113877130	113854626	113877130	+	transcript5480.chr10.nic@NHLRC2	transcript5480.chr10.nic	protein_coding	113854626,113858528,113876521	113855050,113858680,113877130	Gene ID= ENSG00000196865.4 TPM= 3.5 Transcript Type= NA
chr10	113854661	113917194	113854661	113917194	+	ENST00000369301.3@NHLRC2	ENST00000369301.3	protein_coding	113854661,113858528,113876521,113879574,113884251,113898110,113901666,113902471,113903527,113904817,113908280	113855050,113858680,113876976,113879695,113884380,113898209,113901897,113902593,113903736,113905036,113917194	Gene ID= ENSG00000196865.4 TPM= 33.86 Transcript Type= protein_coding
chr10	114044056	114046908	114044056	114046908	+	ENST00000369295.3@ADRB1	ENST00000369295.3	protein_coding	114044056	114046908	Gene ID= ENSG00000043591.5 TPM= 21.02 Transcript Type= protein_coding
chr10	114120862	114174220	114120862	114174220	-	transcript5486.chr10.nic@CCDC186	transcript5486.chr10.nic	protein_coding	114174015,114173141,114162637,114157554,114151092,114145549,114144497,114137186,114136148,114135891,114134913,114131929,114131147,114129891,114127461,114125886,114120862	114174220,114173265,114163329,114157680,114151220,114145761,114144616,114137290,114136246,114135977,114135055,114132184,114131336,114129971,114127671,114126105,114125226	Gene ID= ENSG00000165813.18 TPM= 4.67 Transcript Type= NA
chr10	114122213	114174220	114122213	114174220	-	transcript5491.chr10.nnic@CCDC186	transcript5491.chr10.nnic	protein_coding	114174015,114157554,114151092,114145549,114144497,114137186,114136148,114135891,114134913,114131929,114131147,114129891,114127461,114125886,114122213	114174220,114157680,114151220,114145761,114144616,114137290,114136246,114135977,114135055,114132184,114131336,114129971,114127671,114126105,114125226	Gene ID= ENSG00000165813.18 TPM= 2.34 Transcript Type= NA
chr10	114127465	114174325	114127465	114174325	-	transcript5492.chr10.nic@CCDC186	transcript5492.chr10.nic	protein_coding	114174015,114162637,114157554,114151092,114145549,114144497,114137186,114136148,114135891,114134913,114131929,114131147,114129891,114127465	114174325,114163329,114157680,114151220,114145761,114144616,114137290,114136246,114135977,114135055,114132184,114131336,114129971,114127671	Gene ID= ENSG00000165813.18 TPM= 3.5 Transcript Type= NA
chr10	114120862	114174220	114120862	114174220	-	ENST00000369287.7@CCDC186	ENST00000369287.7	protein_coding	114174015,114162637,114157554,114151092,114145549,114144497,114137186,114136148,114135891,114134913,114131929,114131147,114129891,114127461,114125886,114120862	114174220,114163329,114157680,114151220,114145761,114144616,114137290,114136246,114135977,114135055,114132184,114131336,114129971,114127671,114126105,114125226	Gene ID= ENSG00000165813.18 TPM= 4.67 Transcript Type= protein_coding
chr10	114294824	114404756	114294824	114404756	-	ENST00000369271.7@AFAP1L2	ENST00000369271.7	protein_coding	114404440,114340603,114333221,114331803,114323171,114315560,114313871,114310354,114308433,114307805,114304719,114302339,114301354,114300445,114300194,114299260,114297232,114296978,114294824	114404756,114340731,114333295,114331897,114323261,114315765,114314050,114310443,114308517,114307909,114304930,114302484,114301465,114300690,114300362,114299415,114297413,114297100,114296068	Gene ID= ENSG00000169129.14 TPM= 14.01 Transcript Type= protein_coding
chr10	114294824	114404485	114294824	114404485	-	ENST00000304129.8@AFAP1L2	ENST00000304129.8	protein_coding	114404440,114340603,114333221,114331803,114323171,114315560,114313871,114310354,114308433,114307805,114304719,114302339,114301354,114300445,114300194,114299260,114297220,114296978,114294824	114404485,114340731,114333295,114331897,114323261,114315765,114314050,114310443,114308517,114307909,114304930,114302484,114301465,114300690,114300362,114299415,114297413,114297100,114296068	Gene ID= ENSG00000169129.14 TPM= 3.5 Transcript Type= protein_coding
chr10	114296142	114300108	114296142	114300108	+	transcript5513.chr10.nnic@NA	transcript5513.chr10.nnic	NA	114296142	114300108	Gene ID= novel_gene_chr10_5514 TPM= 2.34 Transcript Type= NA
chr10	114431113	114632171	114431113	114632171	-	transcript5515.chr10.nnic@ABLIM1	transcript5515.chr10.nnic	protein_coding	114631902,114601827,114575416,114571297,114547650,114545005,114491791,114487958,114473879,114472977,114468181,114465698,114453379,114451624,114447880,114445312,114444029,114441722,114441017,114440082,114439176,114437844,114431113	114632171,114601961,114575599,114571406,114547776,114545098,114491878,114488016,114473956,114473132,114468216,114465827,114453483,114451671,114448020,114445403,114444134,114441786,114441077,114440089,114439250,114437924,114436373	Gene ID= ENSG00000099204.18 TPM= 10.22 Transcript Type= NA
chr10	114431113	114768323	114431113	114768323	-	transcript5519.chr10.nnic@ABLIM1	transcript5519.chr10.nnic	protein_coding	114768061,114601827,114575416,114571297,114547650,114545005,114491791,114487958,114473879,114472977,114468181,114465698,114451624,114447880,114445312,114444029,114441722,114441017,114440082,114439176,114437844,114431113	114768323,114601961,114575599,114571406,114547776,114545098,114491878,114488016,114473956,114473132,114468216,114465827,114451671,114448020,114445403,114444134,114441786,114441077,114440089,114439250,114437924,114436373	Gene ID= ENSG00000099204.18 TPM= 15.18 Transcript Type= NA
chr10	114431113	114684479	114431113	114684479	-	transcript5523.chr10.nnic@ABLIM1	transcript5523.chr10.nnic	protein_coding	114684290,114601827,114575416,114571297,114547650,114545005,114491791,114487958,114473879,114472977,114468181,114465698,114451624,114445312,114444029,114441722,114441017,114440082,114439176,114437844,114431113	114684479,114601961,114575599,114571406,114547776,114545098,114491878,114488016,114473956,114473132,114468216,114465827,114451671,114445403,114444134,114441786,114441077,114440089,114439250,114437924,114436373	Gene ID= ENSG00000099204.18 TPM= 10.22 Transcript Type= NA
chr10	114431113	114526928	114431113	114526928	-	transcript5525.chr10.nic@ABLIM1	transcript5525.chr10.nic	protein_coding	114526660,114491791,114487958,114473879,114472977,114468181,114465698,114453379,114451624,114447880,114445312,114444029,114441722,114441017,114440082,114439176,114437844,114431113	114526928,114491878,114488016,114473956,114473132,114468216,114465827,114453483,114451671,114448020,114445403,114444134,114441786,114441077,114440089,114439250,114437924,114436373	Gene ID= ENSG00000099204.18 TPM= 16.05 Transcript Type= NA
chr10	114431113	114526928	114431113	114526928	-	transcript5526.chr10.nic@ABLIM1	transcript5526.chr10.nic	protein_coding	114526660,114491791,114487958,114473879,114472977,114468181,114465698,114451624,114447880,114445312,114444029,114441722,114441017,114440082,114439176,114437844,114431113	114526928,114491878,114488016,114473956,114473132,114468216,114465827,114451671,114448020,114445403,114444134,114441786,114441077,114440089,114439250,114437924,114436373	Gene ID= ENSG00000099204.18 TPM= 20.43 Transcript Type= NA
chr10	114431113	114526928	114431113	114526928	-	transcript5530.chr10.nnic@ABLIM1	transcript5530.chr10.nnic	protein_coding	114526660,114491791,114487958,114473879,114472977,114468181,114465698,114451624,114445312,114444029,114441722,114441017,114440082,114439176,114437844,114431113	114526928,114491878,114488016,114473956,114473132,114468216,114465827,114451671,114445403,114444134,114441786,114441077,114440089,114439250,114437924,114436373	Gene ID= ENSG00000099204.18 TPM= 9.05 Transcript Type= NA
chr10	114437323	114441025	114437323	114441025	-	transcript5536.chr10.nnic@NA	transcript5536.chr10.nnic	NA	114437323	114441025	Gene ID= novel_gene_chr10_5537 TPM= 2.34 Transcript Type= NA
chr10	114821744	114864717	114821744	114864717	+	ENST00000369248.8@FAM160B1	ENST00000369248.8	protein_coding	114821744,114830852,114833233,114835537,114836124,114842933,114843741,114845367,114846013,114846175,114846559,114847090,114848647,114855197,114860749,114861231,114861435	114822123,114830930,114833402,114835641,114836246,114843226,114843937,114845481,114846089,114846367,114846728,114847233,114848737,114855340,114860889,114861334,114864717	Gene ID= ENSG00000151553.14 TPM= 31.53 Transcript Type= protein_coding
chr10	114821751	114864703	114821751	114864703	+	transcript5542.chr10.nic@FAM160B1	transcript5542.chr10.nic	protein_coding	114821751,114830852,114833233,114835537,114836124,114842933,114843741,114845367,114846013,114846175,114846559,114847090,114848647,114855197,114860749,114861231	114822123,114830930,114833402,114835641,114836246,114843226,114843937,114845481,114846089,114846367,114846728,114847233,114848737,114855340,114860889,114864703	Gene ID= ENSG00000151553.14 TPM= 2.34 Transcript Type= NA
chr10	114938193	114977676	114938193	114977676	+	ENST00000298746.4@TRUB1	ENST00000298746.4	protein_coding	114938193,114942645,114951094,114959726,114970368,114972135,114974329,114975123	114938539,114942743,114951149,114959807,114970440,114972274,114974385,114977676	Gene ID= ENSG00000165832.5 TPM= 29.19 Transcript Type= protein_coding
chr10	115093365	115171376	115093365	115171376	+	ENST00000609571.5@ATRNL1	ENST00000609571.5	protein_coding	115093365,115120185,115121699,115127593,115129327,115160040,115165558,115171037	115094043,115120268,115121812,115127721,115129535,115160214,115165645,115171376	Gene ID= ENSG00000107518.16 TPM= 1.17 Transcript Type= protein_coding
chr10	116883377	117005577	116883377	117005577	-	ENST00000355371.8@SHTN1	ENST00000355371.8	protein_coding	117005022,116979256,116968652,116960136,116954042,116951909,116948916,116944924,116940466,116929849,116927792,116921434,116915375,116911790,116906627,116901765,116883377	117005577,116979308,116968712,116960230,116954210,116952006,116948997,116945018,116940612,116930002,116927891,116921516,116915484,116911843,116906747,116901957,116886566	Gene ID= ENSG00000187164.19 TPM= 39.7 Transcript Type= protein_coding
chr10	116898732	117005186	116898732	117005186	-	transcript5562.chr10.nic@SHTN1	transcript5562.chr10.nic	protein_coding	117005022,116979256,116968652,116960136,116954042,116951909,116948916,116944924,116940466,116929849,116927792,116921434,116915375,116911790,116906627,116898732	117005186,116979308,116968712,116960230,116954210,116952006,116948997,116945018,116940612,116930002,116927891,116921516,116915484,116911843,116906747,116901957	Gene ID= ENSG00000187164.19 TPM= 2.34 Transcript Type= NA
chr10	117241093	117279430	117241093	117279430	+	ENST00000298472.9@SLC18A2	ENST00000298472.9	protein_coding	117241093,117241679,117243971,117253399,117254048,117254405,117255277,117255479,117255597,117257797,117266733,117266984,117267673,117270071,117270330,117277162	117241220,117241814,117244313,117253457,117254131,117254497,117255366,117255522,117255657,117257892,117266811,117267035,117267736,117270190,117270463,117279430	Gene ID= ENSG00000165646.11 TPM= 18.68 Transcript Type= protein_coding
chr10	117277274	117375467	117277274	117375467	-	ENST00000334464.6@PDZD8	ENST00000334464.6	protein_coding	117374356,117340980,117318872,117290186,117277274	117375467,117341102,117318974,117290348,117285471	Gene ID= ENSG00000165650.11 TPM= 14.01 Transcript Type= protein_coding
chr10	117287216	117375470	117287216	117375470	-	transcript5587.chr10.nic@PDZD8	transcript5587.chr10.nic	protein_coding	117374356,117340980,117318872,117287216	117375470,117341102,117318974,117290348	Gene ID= ENSG00000165650.11 TPM= 4.67 Transcript Type= NA
chr10	118039210	118046933	118039210	118046933	-	transcript5594.chr10.nic@RAB11FIP2	transcript5594.chr10.nic	protein_coding	118045811,118040123,118039210	118046933,118040565,118039440	Gene ID= ENSG00000107560.10 TPM= 10.51 Transcript Type= NA
chr10	118004916	118046603	118004916	118046603	-	ENST00000355624.7@RAB11FIP2	ENST00000355624.7	protein_coding	118045811,118040123,118038972,118015065,118004916	118046603,118040565,118039440,118015110,118009225	Gene ID= ENSG00000107560.10 TPM= 5.84 Transcript Type= protein_coding
chr10	118047004	118100139	118047004	118100139	+	ENST00000454781.5@CASC2	ENST00000454781.5	antisense_RNA	118047004,118049512,118052131,118098196	118047103,118049617,118052196,118100139	Gene ID= ENSG00000177640.15 TPM= 2.34 Transcript Type= antisense_RNA
chr10	118310746	118342320	118310746	118342320	-	ENST00000369172.8@FAM204A	ENST00000369172.8	protein_coding	118342270,118336182,118335554,118335396,118335114,118326154,118311207,118310746	118342320,118336423,118335641,118335426,118335213,118326243,118311313,118310908	Gene ID= ENSG00000165669.13 TPM= 4.67 Transcript Type= protein_coding
chr10	118676411	118755246	118676411	118755246	-	ENST00000369151.7@CACUL1	ENST00000369151.7	protein_coding	118754396,118730284,118729295,118707492,118701306,118695141,118691265,118686598,118676411	118755246,118730410,118729397,118707587,118701408,118695230,118691403,118686641,118686168	Gene ID= ENSG00000151893.14 TPM= 25.69 Transcript Type= protein_coding
chr10	119029716	119033732	119029716	119033732	+	ENST00000425699.2@NANOS1	ENST00000425699.2	protein_coding	119029716	119033732	Gene ID= ENSG00000188613.6 TPM= 8.17 Transcript Type= protein_coding
chr10	119033670	119080804	119033670	119080804	-	ENST00000369144.7@EIF3A	ENST00000369144.7	protein_coding	119080628,119073747,119073441,119072890,119070886,119069446,119065399,119061224,119060746,119059602,119059212,119057956,119056936,119056740,119051199,119050521,119049801,119044054,119041994,119038238,119037119,119033670	119080804,119073937,119073577,119073053,119071085,119069654,119065570,119061328,119060844,119059718,119059397,119058303,119057040,119056853,119051321,119050674,119049985,119044142,119042772,119038439,119037309,119036268	Gene ID= ENSG00000107581.12 TPM= 27.44 Transcript Type= protein_coding
chr10	119035793	119080823	119035793	119080823	-	ENST00000541549.2@EIF3A	ENST00000541549.2	protein_coding	119080628,119073747,119073441,119072890,119070886,119069446,119065399,119061224,119060746,119059602,119059212,119057956,119056936,119056740,119051199,119050521,119049801,119044054,119041994,119038238,119037119,119036031,119035793	119080823,119073937,119073577,119073053,119071085,119069654,119065570,119061328,119060844,119059718,119059397,119058303,119057040,119056853,119051321,119050674,119049985,119044142,119042772,119038439,119037309,119036268,119035983	Gene ID= ENSG00000107581.12 TPM= 40.28 Transcript Type= protein_coding
chr10	119104082	119137984	119104082	119137984	+	transcript5653.chr10.nic@FAM45A	transcript5653.chr10.nic	protein_coding	119104082,119107948,119111849,119117519,119120341,119123469,119129515,119132515,119136471	119104197,119108164,119111928,119117667,119120452,119123569,119129622,119132609,119137984	Gene ID= ENSG00000119979.16 TPM= 2.34 Transcript Type= NA
chr10	119104117	119137195	119104117	119137195	+	ENST00000361432.2@FAM45A	ENST00000361432.2	protein_coding	119104117,119107968,119111849,119117519,119120341,119123469,119129515,119132515,119136471	119104197,119108164,119111928,119117667,119120452,119123569,119129622,119132609,119137195	Gene ID= ENSG00000119979.16 TPM= 16.35 Transcript Type= protein_coding
chr10	119140913	119165421	119140913	119165421	-	transcript5663.chr10.nic@SFXN4	transcript5663.chr10.nic	protein_coding	119165202,119164131,119162340,119161055,119160915,119159728,119158009,119157871,119157668,119156678,119155062,119147775,119146236,119140913	119165421,119164196,119162414,119161081,119160969,119159753,119158062,119157927,119157733,119156756,119155177,119147860,119146353,119141319	Gene ID= ENSG00000183605.16 TPM= 3.5 Transcript Type= NA
chr10	119140913	119165724	119140913	119165724	-	transcript5669.chr10.nic@SFXN4	transcript5669.chr10.nic	protein_coding	119165537,119164131,119160915,119159728,119158009,119157871,119157668,119156678,119155062,119147775,119146236,119140913	119165724,119164196,119162414,119159753,119158062,119157927,119157733,119156756,119155177,119147860,119146353,119141319	Gene ID= ENSG00000183605.16 TPM= 5.84 Transcript Type= NA
chr10	119140913	119165667	119140913	119165667	-	ENST00000355697.6@SFXN4	ENST00000355697.6	protein_coding	119165537,119164131,119162340,119161055,119160915,119159728,119158009,119157871,119157668,119156678,119155062,119147775,119146236,119140913	119165667,119164196,119162414,119161081,119160969,119159753,119158062,119157927,119157733,119156756,119155177,119147860,119146353,119141319	Gene ID= ENSG00000183605.16 TPM= 16.35 Transcript Type= protein_coding
chr10	119167703	119178833	119167703	119178833	-	ENST00000298510.3@PRDX3	ENST00000298510.3	protein_coding	119178755,119177021,119174451,119173737,119172382,119169177,119167703	119178833,119177153,119174592,119173872,119172485,119169342,119168533	Gene ID= ENSG00000165672.6 TPM= 284.89 Transcript Type= protein_coding
chr10	119207589	119455619	119207589	119455619	+	ENST00000392870.2@GRK5	ENST00000392870.2	protein_coding	119207589,119326516,119380815,119396695,119423166,119424993,119430375,119431387,119436651,119439731,119441999,119443544,119448123,119452671,119453145,119454969	119207969,119326611,119380927,119396772,119423266,119425085,119430438,119431527,119436841,119439768,119442088,119443752,119448260,119452808,119453276,119455619	Gene ID= ENSG00000198873.11 TPM= 90.49 Transcript Type= protein_coding
chr10	119207712	119455617	119207712	119455617	+	transcript5680.chr10.nic@GRK5	transcript5680.chr10.nic	protein_coding	119207712,119326516,119380815,119396695,119423166,119424993,119430375,119431387,119436651,119439731,119441999,119443544,119448123,119452671,119453145	119207969,119326611,119380927,119396772,119423266,119425085,119430438,119431527,119436841,119439768,119442088,119443752,119448260,119452808,119455617	Gene ID= ENSG00000198873.11 TPM= 10.51 Transcript Type= NA
chr10	119499925	119542708	119499925	119542708	-	ENST00000369103.2@RGS10	ENST00000369103.2	protein_coding	119542590,119527306,119526032,119515509,119499925	119542708,119527424,119526118,119515652,119500259	Gene ID= ENSG00000148908.14 TPM= 22.18 Transcript Type= protein_coding
chr10	119651370	119677819	119651370	119677819	+	ENST00000369085.7@BAG3	ENST00000369085.7	protein_coding	119651370,119669851,119672255,119676464	119651855,119670177,119672656,119677819	Gene ID= ENSG00000151929.9 TPM= 107.42 Transcript Type= protein_coding
chr10	119726023	119829147	119726023	119829147	+	transcript5708.chr10.nnic@INPP5F	transcript5708.chr10.nnic	protein_coding	119726023,119751076,119781635,119791869,119792157,119796715,119797461,119798543,119804173,119805384,119806360,119807932,119810100,119811757,119820846,119822431,119823071,119823815,119826631	119726359,119751156,119781771,119792036,119792213,119796913,119797640,119798610,119804297,119805461,119806480,119808060,119810217,119811955,119820917,119822504,119823199,119823902,119829147	Gene ID= ENSG00000198825.12 TPM= 4.67 Transcript Type= NA
chr10	119726023	119752603	119726023	119752603	+	transcript5732.chr10.nic@INPP5F	transcript5732.chr10.nic	protein_coding	119726023,119751076	119726359,119752603	Gene ID= ENSG00000198825.12 TPM= 2.34 Transcript Type= NA
chr10	119829790	119872840	119829790	119872840	-	transcript5721.chr10.nnic@MCMBP	transcript5721.chr10.nnic	protein_coding	119872527,119859799,119859041,119858884,119857338,119853050,119849425,119847613,119843254,119842472,119840843,119838535,119836896,119832012,119829790	119872840,119859884,119859181,119858925,119857439,119853194,119849576,119847713,119843426,119842595,119840960,119838700,119837029,119832100,119831600	Gene ID= ENSG00000197771.12 TPM= 3.5 Transcript Type= NA
chr10	119831197	119872849	119831197	119872849	-	ENST00000369077.3@MCMBP	ENST00000369077.3	protein_coding	119872527,119859799,119859041,119858884,119857338,119853050,119849425,119847613,119843254,119842472,119840843,119838535,119836896,119835540,119832012,119831197	119872849,119859884,119859181,119858925,119857439,119853194,119849576,119847713,119843426,119842595,119840960,119838700,119837029,119835704,119832100,119831600	Gene ID= ENSG00000197771.12 TPM= 65.39 Transcript Type= protein_coding
chr10	119892710	119942143	119892710	119942143	+	transcript5733.chr10.nnic@SEC23IP	transcript5733.chr10.nnic	protein_coding	119892710,119898427,119902799,119904084,119909041,119912044,119914730,119915748,119917836,119918393,119919444,119920889,119926036,119929607,119930329,119932133,119933005,119933686,119940586,119941112	119892945,119898959,119903009,119904277,119909130,119912164,119914819,119915889,119918044,119918511,119919596,119920984,119926227,119929762,119930431,119932318,119933167,119933787,119940792,119942143	Gene ID= ENSG00000107651.12 TPM= 4.67 Transcript Type= NA
chr10	119892700	119941736	119892700	119941736	+	transcript5737.chr10.nic@SEC23IP	transcript5737.chr10.nic	protein_coding	119892700,119898244,119902799,119904084,119909041,119912044,119914730,119915748,119917836,119918393,119919444,119920889,119926036,119929607,119930329,119932133,119933005,119933686,119940586	119892945,119898959,119903009,119904277,119909130,119912164,119914819,119915889,119918044,119918511,119919596,119920984,119926227,119929762,119930431,119932318,119933167,119933787,119941736	Gene ID= ENSG00000107651.12 TPM= 14.01 Transcript Type= NA
chr10	120354701	120355183	120354701	120355183	-	ENST00000495531.1@RPL21P16	ENST00000495531.1	processed_pseudogene	120354701	120355183	Gene ID= ENSG00000220842.6 TPM= 8.17 Transcript Type= processed_pseudogene
chr10	120851175	120909524	120851175	120909524	+	ENST00000263461.10@WDR11	ENST00000263461.10	protein_coding	120851175,120852524,120858643,120860109,120862735,120865047,120865630,120866569,120867066,120871170,120873839,120878353,120880826,120883780,120885814,120886689,120889078,120889895,120890716,120900029,120901036,120902257,120903055,120904047,120904646,120905319,120905876,120906776,120908556	120851506,120852635,120858796,120860282,120862921,120865212,120865744,120866764,120867169,120871346,120873923,120878459,120880901,120883888,120885938,120886836,120889184,120890009,120890887,120900137,120901098,120902322,120903232,120904142,120904811,120905416,120906021,120906855,120909524	Gene ID= ENSG00000120008.15 TPM= 23.35 Transcript Type= protein_coding
chr10	120851372	120862697	120851372	120862697	+	transcript5754.chr10.nic@WDR11	transcript5754.chr10.nic	protein_coding	120851372,120852524,120858643,120860109	120851506,120852635,120858796,120862697	Gene ID= ENSG00000120008.15 TPM= 2.34 Transcript Type= NA
chr10	120901850	120980701	120901850	120980701	-	transcript5759.chr10.nnic@AC010998.1	transcript5759.chr10.nnic	lincRNA	120980652,120901850	120980701,120902342	Gene ID= ENSG00000227307.1 TPM= 2.34 Transcript Type= NA
chr10	121478332	121598489	121478332	121598489	-	transcript5761.chr10.nnic@FGFR2	transcript5761.chr10.nnic	protein_coding	121597962,121593709,121565438,121564502,121551290,121538592,121519979,121518682,121515113,121503790,121500826,121498495,121496532,121487991,121487354,121485395,121483698,121478332	121598489,121593967,121565704,121564579,121551459,121538715,121520169,121518829,121515319,121503941,121500947,121498605,121496722,121488113,121487424,121485532,121483803,121480113	Gene ID= ENSG00000066468.22 TPM= 5.35 Transcript Type= NA
chr10	121478334	121598489	121478334	121598489	-	transcript5764.chr10.nnic@FGFR2	transcript5764.chr10.nnic	protein_coding	121597962,121593709,121565438,121564502,121551290,121538592,121519979,121517319,121515113,121503790,121500826,121498495,121496532,121487991,121487354,121485395,121483698,121478334	121598489,121593967,121565704,121564579,121551459,121538715,121520169,121517463,121515319,121503941,121500947,121498605,121496722,121488113,121487424,121485532,121483803,121480021	Gene ID= ENSG00000066468.22 TPM= 2.43 Transcript Type= NA
chr10	121478334	121598489	121478334	121598489	-	transcript5765.chr10.nnic@FGFR2	transcript5765.chr10.nnic	protein_coding	121597962,121593709,121565438,121564502,121551290,121538592,121519979,121518682,121515113,121503790,121500826,121498495,121496532,121487991,121487354,121485395,121483698,121478334	121598489,121593967,121565704,121564579,121551459,121538715,121520169,121518829,121515319,121503941,121500947,121498605,121496722,121488113,121487424,121485532,121483803,121480021	Gene ID= ENSG00000066468.22 TPM= 22.86 Transcript Type= NA
chr10	121478332	121598489	121478332	121598489	-	transcript5775.chr10.nnic@FGFR2	transcript5775.chr10.nnic	protein_coding	121597962,121593709,121564502,121551290,121538592,121519979,121518682,121515113,121503790,121500826,121498495,121496532,121487991,121487354,121485395,121483698,121478332	121598489,121593967,121564579,121551459,121538715,121520169,121518829,121515319,121503941,121500947,121498605,121496722,121488113,121487424,121485532,121483803,121480113	Gene ID= ENSG00000066468.22 TPM= 3.01 Transcript Type= NA
chr10	121478334	121598489	121478334	121598489	-	transcript5778.chr10.nnic@FGFR2	transcript5778.chr10.nnic	protein_coding	121597962,121593709,121564502,121551290,121538592,121519979,121518682,121515113,121503790,121500826,121498495,121496532,121487991,121487354,121485395,121483698,121478334	121598489,121593967,121564579,121551459,121538715,121520169,121518829,121515319,121503941,121500947,121498605,121496722,121488113,121487424,121485532,121483803,121480021	Gene ID= ENSG00000066468.22 TPM= 12.35 Transcript Type= NA
chr10	121740421	121928801	121740421	121928801	-	ENST00000540606.5@ATE1	ENST00000540606.5	protein_coding	121928347,121924266,121922349,121913790,121910906,121902391,121898841,121870006,121841082,121836718,121790169,121740421	121928801,121924329,121922411,121913893,121911151,121902620,121898969,121870038,121841263,121836817,121790289,121743858	Gene ID= ENSG00000107669.17 TPM= 4.67 Transcript Type= protein_coding
chr10	121740424	121928505	121740424	121928505	-	transcript5795.chr10.nic@ATE1	transcript5795.chr10.nic	protein_coding	121928347,121924266,121922349,121913790,121910906,121902391,121899866,121870006,121841082,121836718,121790169,121740424	121928505,121924329,121922411,121913893,121911151,121902620,121899994,121870038,121841263,121836817,121790289,121743858	Gene ID= ENSG00000107669.17 TPM= 3.5 Transcript Type= NA
chr10	121740424	121928072	121740424	121928072	-	transcript5798.chr10.nic@ATE1	transcript5798.chr10.nic	protein_coding	121927844,121924266,121922349,121913790,121910906,121902391,121870006,121841082,121836718,121790169,121740424	121928072,121924329,121922411,121913893,121911151,121902620,121870038,121841263,121836817,121790289,121743858	Gene ID= ENSG00000107669.17 TPM= 4.67 Transcript Type= NA
chr10	121740424	121928036	121740424	121928036	-	ENST00000369043.7@ATE1	ENST00000369043.7	protein_coding	121927844,121924266,121922349,121913790,121910906,121902391,121898841,121870006,121841082,121836718,121790169,121740424	121928036,121924329,121922411,121913893,121911151,121902620,121898969,121870038,121841263,121836817,121790289,121743858	Gene ID= ENSG00000107669.17 TPM= 22.18 Transcript Type= protein_coding
chr10	121957091	121974814	121957091	121974814	-	transcript5803.chr10.nic@NSMCE4A	transcript5803.chr10.nic	protein_coding	121974306,121974004,121970939,121967655,121965286,121963238,121961423,121960358,121959501,121959324,121957091	121974814,121974081,121971069,121967806,121965385,121963328,121961517,121960406,121959595,121959410,121957259	Gene ID= ENSG00000107672.14 TPM= 3.5 Transcript Type= NA
chr10	121957091	121975193	121957091	121975193	-	transcript5806.chr10.nic@NSMCE4A	transcript5806.chr10.nic	protein_coding	121974874,121974004,121970939,121967655,121965286,121963238,121961423,121960358,121959501,121959324,121957091	121975193,121974081,121971069,121967806,121965385,121963328,121962107,121960406,121959595,121959410,121957259	Gene ID= ENSG00000107672.14 TPM= 2.34 Transcript Type= NA
chr10	121957091	121975276	121957091	121975276	-	transcript5810.chr10.nic@NSMCE4A	transcript5810.chr10.nic	protein_coding	121974004,121970939,121967655,121965286,121963238,121961423,121960358,121959501,121959324,121957091	121975276,121971069,121967806,121965385,121963328,121961517,121960406,121959595,121959410,121957259	Gene ID= ENSG00000107672.14 TPM= 5.25 Transcript Type= NA
chr10	121957091	121975197	121957091	121975197	-	transcript5817.chr10.nic@NSMCE4A	transcript5817.chr10.nic	protein_coding	121974874,121974004,121970939,121967655,121965286,121963238,121961423,121959324,121957091	121975197,121974081,121971069,121967806,121965385,121963328,121961517,121960406,121957259	Gene ID= ENSG00000107672.14 TPM= 3.5 Transcript Type= NA
chr10	121957091	121975276	121957091	121975276	-	transcript5821.chr10.nic@NSMCE4A	transcript5821.chr10.nic	protein_coding	121974004,121970939,121967655,121965286,121963238,121961423,121959324,121957091	121975276,121971069,121967806,121965385,121963328,121961517,121960406,121957259	Gene ID= ENSG00000107672.14 TPM= 2.92 Transcript Type= NA
chr10	121957088	121975217	121957088	121975217	-	ENST00000369023.7@NSMCE4A	ENST00000369023.7	protein_coding	121974874,121974004,121970939,121967655,121965286,121963238,121961423,121960358,121959501,121959324,121957088	121975217,121974081,121971069,121967806,121965385,121963328,121961517,121960406,121959595,121959410,121957259	Gene ID= ENSG00000107672.14 TPM= 46.7 Transcript Type= protein_coding
chr10	122127025	122254542	122127025	122254542	+	transcript5838.chr10.nic@TACC2	transcript5838.chr10.nic	protein_coding	122127025,122132609,122143572,122195040,122210397,122215391,122216627,122224726,122226366,122227837,122237395,122237961,122241958,122248643,122249050,122249544,122253991	122127142,122132734,122143706,122195176,122211708,122215451,122216828,122224787,122226481,122228008,122237538,122238037,122242001,122248803,122249156,122249664,122254542	Gene ID= ENSG00000138162.18 TPM= 40.38 Transcript Type= NA
chr10	122112973	122254542	122112973	122254542	+	transcript5843.chr10.nic@TACC2	transcript5843.chr10.nic	protein_coding	122112973,122132609,122195040,122210397,122215391,122216627,122224726,122226366,122227837,122237395,122237961,122241958,122248643,122249050,122249544,122253991	122113233,122132734,122195176,122211708,122215451,122216828,122224787,122226481,122228008,122237538,122238037,122242001,122248803,122249156,122249664,122254542	Gene ID= ENSG00000138162.18 TPM= 21.11 Transcript Type= NA
chr10	122126714	122254544	122126714	122254544	+	ENST00000369000.5@TACC2	ENST00000369000.5	protein_coding	122126714,122132609,122195040,122210397,122215403,122216627,122224726,122226366,122227837,122237395,122237961,122241958,122248643,122249050,122249544,122253991	122127142,122132734,122195176,122211708,122215451,122216828,122224787,122226481,122228008,122237538,122238037,122242001,122248803,122249156,122249664,122254544	Gene ID= ENSG00000138162.18 TPM= 8.76 Transcript Type= protein_coding
chr10	122127025	122196959	122127025	122196959	+	transcript5857.chr10.nic@TACC2	transcript5857.chr10.nic	protein_coding	122127025,122132609,122195040	122127142,122132734,122196959	Gene ID= ENSG00000138162.18 TPM= 6.42 Transcript Type= NA
chr10	122134173	122142139	122134173	122142139	-	transcript5859.chr10.nnic@NA	transcript5859.chr10.nnic	NA	122134173	122142139	Gene ID= novel_gene_chr10_5860 TPM= 22.18 Transcript Type= NA
chr10	122148099	122153154	122148099	122153154	-	transcript5865.chr10.nnic@NA	transcript5865.chr10.nnic	NA	122148099	122153154	Gene ID= novel_gene_chr10_5866 TPM= 56.04 Transcript Type= NA
chr10	122153001	122156381	122153001	122156381	-	transcript5861.chr10.nnic@NA	transcript5861.chr10.nnic	NA	122153001	122156381	Gene ID= novel_gene_chr10_5862 TPM= 15.18 Transcript Type= NA
chr10	122156229	122162078	122156229	122162078	-	transcript5863.chr10.nnic@NA	transcript5863.chr10.nnic	NA	122156229	122162078	Gene ID= novel_gene_chr10_5864 TPM= 15.18 Transcript Type= NA
chr10	122202015	122203980	122202015	122203980	-	transcript5867.chr10.nnic@NA	transcript5867.chr10.nnic	NA	122202015	122203980	Gene ID= novel_gene_chr10_5868 TPM= 8.17 Transcript Type= NA
chr10	122374224	122432345	122374224	122432345	+	transcript5877.chr10.nnic@PLEKHA1	transcript5877.chr10.nnic	protein_coding	122374224,122392303,122393181,122397918,122400343,122406576,122412920,122415859,122417900,122424199,122424896,122426942,122428276,122429624	122374806,122392372,122393341,122397974,122400388,122406673,122413045,122416002,122417968,122424263,122424959,122427031,122428316,122432345	Gene ID= ENSG00000107679.14 TPM= 41.43 Transcript Type= NA
chr10	122375154	122432345	122375154	122432345	+	transcript5883.chr10.nnic@PLEKHA1	transcript5883.chr10.nnic	protein_coding	122375154,122392303,122393181,122397918,122400343,122406576,122412920,122415859,122417900,122424199,122424896,122426942,122428276,122429624	122375559,122392372,122393341,122397974,122400388,122406673,122413045,122416002,122417968,122424263,122424959,122427031,122428316,122432345	Gene ID= ENSG00000107679.14 TPM= 7.39 Transcript Type= NA
chr10	122374543	122432354	122374543	122432354	+	transcript5887.chr10.nnic@PLEKHA1	transcript5887.chr10.nnic	protein_coding	122374543,122392303,122393181,122397918,122400343,122406576,122412920,122415859,122417900,122424199,122424896,122426942,122429624	122374806,122392372,122393341,122397974,122400388,122406673,122413045,122416002,122417968,122424263,122424959,122427031,122432354	Gene ID= ENSG00000107679.14 TPM= 23.52 Transcript Type= NA
chr10	122374697	122432345	122374697	122432345	+	transcript5888.chr10.nic@PLEKHA1	transcript5888.chr10.nic	protein_coding	122374697,122393181,122397918,122400343,122406576,122412920,122415859,122417900,122424199,122424896,122426942,122428276,122429624	122374806,122393341,122397974,122400388,122406673,122413045,122416002,122417968,122424263,122424959,122427031,122428316,122432345	Gene ID= ENSG00000107679.14 TPM= 12.06 Transcript Type= NA
chr10	122461525	122514908	122461525	122514908	+	ENST00000368984.7@HTRA1	ENST00000368984.7	protein_coding	122461525,122488902,122489422,122506691,122507370,122508656,122510096,122511970,122514191	122462124,122489001,122489626,122506885,122507402,122508770,122510153,122512065,122514908	Gene ID= ENSG00000166033.11 TPM= 148.28 Transcript Type= protein_coding
chr10	122506691	122514907	122506691	122514907	+	ENST00000420892.1@HTRA1	ENST00000420892.1	protein_coding	122506691,122507370,122508656,122510096,122511970,122514191	122506885,122507402,122508770,122510153,122512065,122514907	Gene ID= ENSG00000166033.11 TPM= 16.35 Transcript Type= protein_coding
chr10	122560645	122563595	122560645	122563595	+	transcript5923.chr10.nnic@NA	transcript5923.chr10.nnic	NA	122560645	122563595	Gene ID= novel_gene_chr10_5924 TPM= 2.34 Transcript Type= NA
chr10	122560754	122643736	122560754	122643736	+	transcript5912.chr10.nnic@DMBT1	transcript5912.chr10.nnic	protein_coding	122560754,122565967,122570162,122570890,122572314,122573715,122576399,122577811,122578718,122579578,122592493,122593569,122594496,122595303,122599024,122601797,122603100,122605050,122605856,122607159,122609109,122609915,122611218,122613168,122613974,122615277,122617228,122618017,122619308,122620253,122621057,122625277,122625933,122629840,122630288,122630961,122631855,122632861,122633191,122635991,122637128,122640040,122643122	122560831,122565996,122570209,122570937,122572361,122573762,122576722,122577840,122578759,122579798,122592595,122593598,122594528,122595552,122599031,122602120,122603129,122605082,122606179,122607188,122609141,122610238,122611247,122613200,122614297,122615306,122617260,122618340,122619337,122620291,122621380,122625303,122625965,122629993,122630490,122631281,122631875,122632890,122633341,122636199,122637312,122640449,122643736	Gene ID= ENSG00000187908.16 TPM= 23.35 Transcript Type= NA
chr10	122560755	122643736	122560755	122643736	+	transcript5917.chr10.nnic@DMBT1	transcript5917.chr10.nnic	protein_coding	122560755,122565967,122570162,122570890,122572314,122573715,122576399,122577811,122578718,122579578,122580866,122581793,122582600,122584322,122585271,122586060,122588944,122590665,122591479,122592272,122593569,122594496,122595303,122597025,122597974,122598774,122600064,122600991,122601797,122603100,122605050,122605856,122607159,122609915,122618286,122631855,122632861,122633191,122635991,122637128,122640040,122643122	122560831,122565996,122570209,122570937,122572361,122573762,122576722,122577840,122578759,122579901,122580895,122581825,122582923,122584351,122585309,122586383,122589267,122590694,122591517,122592595,122593598,122594528,122595626,122597054,122598012,122599097,122600093,122601023,122602120,122603129,122605082,122606179,122607188,122610223,122618340,122631875,122632890,122633341,122636199,122637312,122640449,122643736	Gene ID= ENSG00000187908.16 TPM= 11.68 Transcript Type= NA
chr10	122645555	122648204	122645555	122648204	-	transcript5925.chr10.nnic@NA	transcript5925.chr10.nnic	NA	122645555	122648204	Gene ID= novel_gene_chr10_5926 TPM= 2.34 Transcript Type= NA
chr10	122931508	122954403	122931508	122954403	-	ENST00000481909.1@C10orf88	ENST00000481909.1	protein_coding	122954015,122952829,122951954,122948649,122937705,122931508	122954403,122953032,122952026,122948855,122938159,122932661	Gene ID= ENSG00000119965.12 TPM= 9.34 Transcript Type= protein_coding
chr10	122934053	122954215	122934053	122954215	-	transcript5930.chr10.nic@C10orf88	transcript5930.chr10.nic	protein_coding	122954015,122952829,122951954,122948649,122934053	122954215,122953032,122952026,122948855,122938159	Gene ID= ENSG00000119965.12 TPM= 2.34 Transcript Type= NA
chr10	122980040	122990390	122980040	122990390	+	ENST00000368887.7@PSTK	ENST00000368887.7	protein_coding	122980040,122982733,122983272,122986300,122986869,122987334,122990174	122980695,122983024,122983470,122986375,122986962,122987504,122990390	Gene ID= ENSG00000179988.13 TPM= 1.17 Transcript Type= protein_coding
chr10	122980478	122990392	122980478	122990392	+	ENST00000406217.6@PSTK	ENST00000406217.6	protein_coding	122980478,122982733,122983272,122986300,122986869,122990174	122980695,122983024,122983470,122986375,122986962,122990392	Gene ID= ENSG00000179988.13 TPM= 1.17 Transcript Type= protein_coding
chr10	122990806	123008817	122990806	123008817	-	ENST00000368886.9@IKZF5	ENST00000368886.9	protein_coding	123008694,123007026,122998493,122995994,122990806	123008817,123007176,122998671,122996176,122994723	Gene ID= ENSG00000095574.11 TPM= 14.01 Transcript Type= protein_coding
chr10	123009016	123058311	123009016	123058311	+	ENST00000358776.6@ACADSB	ENST00000358776.6	protein_coding	123009016,123034356,123037747,123040466,123041209,123043046,123044393,123047209,123051049,123053061,123053695	123009071,123034515,123037847,123040672,123041379,123043171,123044485,123047298,123051186,123053160,123058311	Gene ID= ENSG00000196177.12 TPM= 7.01 Transcript Type= protein_coding
chr10	123154277	123170467	123154277	123170467	+	ENST00000368865.8@BUB3	ENST00000368865.8	protein_coding	123154277,123154918,123155658,123157729,123160407,123162236,123162612,123163820	123154485,123155112,123155727,123157880,123160565,123162413,123162828,123170467	Gene ID= ENSG00000154473.17 TPM= 7.01 Transcript Type= protein_coding
chr10	123154391	123165365	123154391	123165365	+	transcript5956.chr10.nic@BUB3	transcript5956.chr10.nic	protein_coding	123154391,123154918,123155658,123157729,123160407,123162236,123162612	123154485,123155112,123155727,123157880,123160565,123162413,123165365	Gene ID= ENSG00000154473.17 TPM= 11.68 Transcript Type= NA
chr10	123154415	123165365	123154415	123165365	+	ENST00000368858.9@BUB3	ENST00000368858.9	protein_coding	123154415,123154918,123155658,123157729,123160407,123162236,123162612,123165047	123154485,123155112,123155727,123157880,123160565,123162413,123162828,123165365	Gene ID= ENSG00000154473.17 TPM= 38.53 Transcript Type= protein_coding
chr10	123156755	123162018	123156755	123162018	-	transcript5958.chr10.nnic@NA	transcript5958.chr10.nnic	NA	123156755	123162018	Gene ID= novel_gene_chr10_5959 TPM= 2.34 Transcript Type= NA
chr10	123745636	123891814	123745636	123891814	-	ENST00000241305.3@CPXM2	ENST00000241305.3	protein_coding	123891356,123880211,123862614,123842349,123799115,123797976,123780167,123770916,123768526,123766973,123761872,123757213,123754663,123745636	123891814,123880309,123862723,123842488,123799199,123798126,123780255,123771039,123768722,123767152,123762169,123757352,123754762,123747017	Gene ID= ENSG00000121898.12 TPM= 16.35 Transcript Type= protein_coding
chr10	124007668	124092414	124007668	124092414	-	transcript5965.chr10.nnic@CHST15	transcript5965.chr10.nnic	protein_coding	124092227,124045667,124044580,124042301,124038515,124021256,124012333,124007668	124092414,124046724,124044919,124042447,124038671,124021412,124012480,124010339	Gene ID= ENSG00000182022.17 TPM= 10.51 Transcript Type= NA
chr10	124007668	124092454	124007668	124092454	-	ENST00000346248.7@CHST15	ENST00000346248.7	protein_coding	124092324,124045667,124044580,124042301,124038515,124021256,124012333,124007668	124092454,124046724,124044919,124042447,124038671,124021412,124012480,124010339	Gene ID= ENSG00000182022.17 TPM= 28.02 Transcript Type= protein_coding
chr10	124007666	124093607	124007666	124093607	-	ENST00000435907.5@CHST15	ENST00000435907.5	protein_coding	124093469,124045667,124044580,124042301,124038515,124021256,124012333,124007666	124093607,124046724,124044919,124042447,124038671,124021412,124012480,124010339	Gene ID= ENSG00000182022.17 TPM= 11.68 Transcript Type= protein_coding
chr10	124092859	124094939	124092859	124094939	+	transcript5979.chr10.nnic@NA	transcript5979.chr10.nnic	NA	124092859	124094939	Gene ID= novel_gene_chr10_5980 TPM= 2.34 Transcript Type= NA
chr10	124397303	124418923	124397303	124418923	-	transcript5982.chr10.nnic@OAT	transcript5982.chr10.nnic	protein_coding	124418873,124414346,124411973,124408741,124408542,124405436,124403798,124402927,124401726,124400840,124397303	124418923,124414432,124412200,124408965,124408637,124405563,124403920,124403055,124401839,124400984,124398102	Gene ID= ENSG00000065154.11 TPM= 6.62 Transcript Type= NA
chr10	124397307	124418936	124397307	124418936	-	ENST00000368845.5@OAT	ENST00000368845.5	protein_coding	124418873,124411973,124408741,124408542,124405436,124403798,124402927,124401726,124400840,124397307	124418936,124412200,124408965,124408637,124405563,124403920,124403055,124401839,124400984,124398102	Gene ID= ENSG00000065154.11 TPM= 125.13 Transcript Type= protein_coding
chr10	124397303	124418976	124397303	124418976	-	ENST00000539214.5@OAT	ENST00000539214.5	protein_coding	124418873,124408741,124408542,124405436,124403798,124402927,124401726,124400840,124397303	124418976,124408965,124408637,124405563,124403920,124403055,124401839,124400984,124398102	Gene ID= ENSG00000065154.11 TPM= 4.87 Transcript Type= protein_coding
chr10	124461835	124614141	124461835	124614141	+	ENST00000368842.9@LHPP	ENST00000368842.9	protein_coding	124461835,124484139,124488422,124496961,124498036,124517180,124613264	124461987,124484326,124488575,124497024,124498128,124517271,124614141	Gene ID= ENSG00000107902.13 TPM= 18.68 Transcript Type= protein_coding
chr10	124461834	124498514	124461834	124498514	+	ENST00000392757.8@LHPP	ENST00000392757.8	protein_coding	124461834,124484139,124488422,124496961,124498036,124498328	124461987,124484326,124488575,124497024,124498128,124498514	Gene ID= ENSG00000107902.13 TPM= 3.5 Transcript Type= protein_coding
chr10	124757834	124791887	124757834	124791887	-	transcript6005.chr10.nic@AC068896.1	transcript6005.chr10.nic	protein_coding	124791724,124790273,124789043,124774675,124765392,124757834	124791887,124790338,124789157,124774782,124765608,124760503	Gene ID= ENSG00000258539.1 TPM= 2.34 Transcript Type= NA
chr10	124619292	124744050	124619292	124744050	-	ENST00000337318.7@FAM53B	ENST00000337318.7	protein_coding	124744013,124706636,124696158,124681607,124619292	124744050,124706887,124696212,124682379,124623604	Gene ID= ENSG00000189319.13 TPM= 49.04 Transcript Type= protein_coding
chr10	124759954	124791870	124759954	124791870	-	ENST00000368836.6@EEF1AKMT2	ENST00000368836.6	protein_coding	124791724,124790273,124789043,124774675,124765392,124762300,124759954	124791870,124790338,124789157,124774782,124765608,124762558,124760503	Gene ID= ENSG00000203791.14 TPM= 1.17 Transcript Type= protein_coding
chr10	124760146	124791868	124760146	124791868	-	ENST00000464099.5@EEF1AKMT2	ENST00000464099.5	protein_coding	124791724,124790273,124789039,124774675,124765392,124760146	124791868,124790338,124789157,124774782,124765608,124760503	Gene ID= ENSG00000203791.14 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr10	124765326	124769232	124765326	124769232	+	transcript6020.chr10.nnic@NA	transcript6020.chr10.nnic	NA	124765326	124769232	Gene ID= novel_gene_chr10_6021 TPM= 4.67 Transcript Type= NA
chr10	124801785	124836670	124801785	124836670	+	ENST00000298492.5@ABRAXAS2	ENST00000298492.5	protein_coding	124801785,124806831,124816576,124819384,124826595,124828756,124829393,124831349,124834502	124801901,124806921,124816612,124819450,124826785,124828875,124829477,124831463,124836670	Gene ID= ENSG00000165660.7 TPM= 26.85 Transcript Type= protein_coding
chr10	124916857	124986464	124916857	124986464	+	transcript6044.chr10.nnic@ZRANB1	transcript6044.chr10.nnic	protein_coding	124916857,124940374,124942457,124966594,124971965,124973645,124974200,124981709,124983175,124983459,124984774	124917272,124940547,124943307,124966781,124972118,124973716,124974398,124981829,124983304,124983688,124986464	Gene ID= ENSG00000019995.6 TPM= 6.62 Transcript Type= NA
chr10	124916895	124987430	124916895	124987430	+	transcript6047.chr10.nnic@ZRANB1	transcript6047.chr10.nnic	protein_coding	124916895,124942457,124962287,124966594,124971965,124973645,124974200,124981709,124983175,124983459,124984774	124917272,124943307,124962408,124966781,124972118,124973716,124974398,124981829,124983304,124983688,124987430	Gene ID= ENSG00000019995.6 TPM= 3.74 Transcript Type= NA
chr10	124916895	124987430	124916895	124987430	+	transcript6078.chr10.nic@ZRANB1	transcript6078.chr10.nic	protein_coding	124916895,124942457,124966594,124971965,124973645,124974200,124981709,124983175,124983459,124984774	124917272,124943307,124966781,124972118,124973716,124974398,124981829,124983304,124983688,124987430	Gene ID= ENSG00000019995.6 TPM= 8.7 Transcript Type= NA
chr10	124916920	124986002	124916920	124986002	+	transcript6092.chr10.nnic@ZRANB1	transcript6092.chr10.nnic	protein_coding	124916920,124966594,124971965,124973645,124974200,124981709,124983175,124983459,124984774	124917272,124966781,124972118,124973716,124974398,124981829,124983304,124983688,124986002	Gene ID= ENSG00000019995.6 TPM= 2.34 Transcript Type= NA
chr10	124916896	124918348	124916896	124918348	-	transcript6096.chr10.nnic@NA	transcript6096.chr10.nnic	NA	124916896	124918348	Gene ID= novel_gene_chr10_6097 TPM= 4.67 Transcript Type= NA
chr10	124988335	125160580	124988335	125160580	-	transcript6083.chr10.nic@CTBP2	transcript6083.chr10.nic	protein_coding	125160319,125038997,125003338,125002960,124997964,124994469,124993855,124993202,124992695,124988335	125160580,125039155,125003492,125003104,124998170,124994683,124993985,124993329,124992812,124989698	Gene ID= ENSG00000175029.16 TPM= 11.44 Transcript Type= NA
chr10	124988883	125159950	124988883	125159950	-	transcript6087.chr10.nic@CTBP2	transcript6087.chr10.nic	protein_coding	125159857,125038997,125003338,125002960,124997964,124994469,124993855,124993202,124992695,124988883	125159950,125039155,125003492,125003104,124998170,124994683,124993985,124993329,124992812,124989698	Gene ID= ENSG00000175029.16 TPM= 3.5 Transcript Type= NA
chr10	124988335	125160577	124988335	125160577	-	transcript6093.chr10.nnic@CTBP2	transcript6093.chr10.nnic	protein_coding	125160319,125003338,125002960,124997964,124994469,124993855,124993202,124992695,124988335	125160577,125003492,125003104,124998170,124994683,124993985,124993329,124992812,124989698	Gene ID= ENSG00000175029.16 TPM= 4.44 Transcript Type= NA
chr10	125719690	125747239	125719690	125747239	+	transcript6106.chr10.nnic@EDRF1	transcript6106.chr10.nnic	protein_coding	125719690,125721204,125723068,125723811,125725318,125725682,125729358,125730288,125733404,125733635,125734072,125735644,125737918,125738295,125740463,125741001,125743058,125745772	125719915,125721412,125723134,125723936,125725442,125725838,125729479,125730399,125733551,125733743,125734183,125735904,125737989,125738445,125740651,125741201,125743276,125747239	Gene ID= ENSG00000107938.17 TPM= 2.92 Transcript Type= NA
chr10	125719703	125764139	125719703	125764139	+	ENST00000337623.7@EDRF1	ENST00000337623.7	protein_coding	125719703,125721204,125723068,125723811,125725318,125725682,125729358,125730288,125733404,125733635,125734072,125735644,125737918,125738295,125740463,125741001,125743058,125745707,125747536,125747863,125749412,125752799,125753694,125763301	125719915,125721412,125723134,125723936,125725442,125725838,125729479,125730399,125733551,125733743,125734183,125735904,125737989,125738445,125740651,125741201,125743276,125745930,125747694,125748012,125749565,125752914,125753845,125764139	Gene ID= ENSG00000107938.17 TPM= 1.75 Transcript Type= protein_coding
chr10	125788583	125823277	125788583	125823277	-	transcript6108.chr10.nnic@UROS	transcript6108.chr10.nnic	protein_coding	125823029,125816437,125816177,125815034,125812214,125807413,125798065,125796790,125796103,125794880,125788583	125823277,125816525,125816260,125815130,125812288,125807487,125798145,125796861,125796188,125794978,125789005	Gene ID= ENSG00000188690.12 TPM= 3.5 Transcript Type= NA
chr10	125788583	125823277	125788583	125823277	-	transcript6109.chr10.nnic@UROS	transcript6109.chr10.nnic	protein_coding	125823029,125816437,125816177,125815034,125812214,125807413,125798065,125797412,125796103,125794880,125788583	125823277,125816525,125816260,125815130,125812288,125807487,125798145,125797641,125796188,125794978,125789005	Gene ID= ENSG00000188690.12 TPM= 2.34 Transcript Type= NA
chr10	125788582	125796190	125788582	125796190	-	ENST00000484541.5@UROS	ENST00000484541.5	protein_coding	125796103,125794880,125789283,125788582	125796190,125794978,125789528,125789005	Gene ID= ENSG00000188690.12 TPM= 1.17 Transcript Type= processed_transcript
chr10	125788578	125823227	125788578	125823227	-	ENST00000368797.8@UROS	ENST00000368797.8	protein_coding	125823029,125816437,125816177,125815034,125812214,125807413,125798065,125796103,125794880,125788578	125823227,125816525,125816260,125815130,125812288,125807487,125798145,125796188,125794978,125789005	Gene ID= ENSG00000188690.12 TPM= 28.02 Transcript Type= protein_coding
chr10	125823546	125836553	125823546	125836553	+	ENST00000278100.10@BCCIP	ENST00000278100.10	protein_coding	125823546,125826591,125827558,125830562,125831420,125833772,125836104	125823722,125826665,125827638,125830651,125831607,125833946,125836553	Gene ID= ENSG00000107949.16 TPM= 24.52 Transcript Type= protein_coding
chr10	125823546	125853695	125823546	125853695	+	ENST00000368759.5@BCCIP	ENST00000368759.5	protein_coding	125823546,125826591,125827558,125830562,125831420,125833772,125841255,125853125	125823722,125826665,125827638,125830651,125831607,125833946,125841330,125853695	Gene ID= ENSG00000107949.16 TPM= 3.5 Transcript Type= protein_coding
chr10	125823546	125842805	125823546	125842805	+	ENST00000299130.7@BCCIP	ENST00000299130.7	protein_coding	125823546,125826591,125827558,125830562,125831420,125833772,125841255	125823722,125826665,125827638,125830651,125831607,125833946,125842805	Gene ID= ENSG00000107949.16 TPM= 14.01 Transcript Type= protein_coding
chr10	125836337	125896496	125836337	125896496	-	transcript6117.chr10.nnic@DHX32	transcript6117.chr10.nnic	protein_coding	125896218,125885365,125880543,125866990,125859603,125853961,125852543,125852293,125841743,125840847,125839001,125838206,125836337	125896496,125885676,125881071,125867183,125859975,125854203,125852642,125852451,125841934,125840996,125839188,125838387,125836855	Gene ID= ENSG00000089876.11 TPM= 27.44 Transcript Type= NA
chr10	125836337	125896496	125836337	125896496	-	transcript6119.chr10.nnic@DHX32	transcript6119.chr10.nnic	protein_coding	125896218,125885629,125880543,125866990,125859603,125853961,125852543,125852293,125841743,125840847,125839001,125838206,125836337	125896496,125885676,125881071,125867183,125859975,125854203,125852642,125852451,125841934,125840996,125839188,125838387,125836855	Gene ID= ENSG00000089876.11 TPM= 3.5 Transcript Type= NA
chr10	125836337	125896504	125836337	125896504	-	transcript6121.chr10.nic@DHX32	transcript6121.chr10.nic	protein_coding	125896218,125880543,125866990,125859603,125853961,125852543,125852293,125841743,125840847,125839001,125838206,125836337	125896504,125881071,125867183,125859975,125854203,125852642,125852451,125841934,125840996,125839188,125838387,125836855	Gene ID= ENSG00000089876.11 TPM= 32.69 Transcript Type= NA
chr10	125879016	125896504	125879016	125896504	-	transcript6141.chr10.nic@DHX32	transcript6141.chr10.nic	protein_coding	125896218,125879016	125896504,125881071	Gene ID= ENSG00000089876.11 TPM= 2.34 Transcript Type= NA
chr10	126905409	127452517	126905409	127452517	+	ENST00000280333.9@DOCK1	ENST00000280333.9	protein_coding	126905409,126970702,126977948,126981918,126987521,126990455,126996748,126998092,126999354,127000172,127008732,127012295,127018710,127023200,127024685,127026352,127031650,127032137,127037719,127042625,127043064,127052681,127061668,127106231,127110248,127125474,127127669,127248008,127257335,127339006,127343646,127354669,127362064,127373781,127374058,127380082,127381278,127384790,127403055,127404325,127409037,127409313,127410840,127415152,127418365,127419666,127425874,127433283,127439027,127444126,127447394,127451332	126905563,126970785,126977988,126981973,126987617,126990603,126996883,126998249,126999435,127000307,127008804,127012374,127018835,127023324,127024783,127026424,127031753,127032320,127037816,127042714,127043164,127052815,127061776,127106301,127110354,127125601,127127764,127248109,127257429,127339084,127343746,127354727,127362212,127373866,127374214,127380122,127381368,127384909,127403144,127404429,127409178,127409391,127410924,127415238,127418541,127419749,127426011,127433428,127439225,127444279,127447545,127452517	Gene ID= ENSG00000150760.12 TPM= 26.85 Transcript Type= protein_coding
chr10	126905439	126907911	126905439	126907911	+	transcript6150.chr10.nnic@NA	transcript6150.chr10.nnic	NA	126905439	126907911	Gene ID= novel_gene_chr10_6151 TPM= 3.5 Transcript Type= NA
chr10	126962165	126966020	126962165	126966020	-	transcript6152.chr10.nnic@NA	transcript6152.chr10.nnic	NA	126962165	126966020	Gene ID= novel_gene_chr10_6153 TPM= 2.34 Transcript Type= NA
chr10	127128380	127129579	127128380	127129579	-	transcript6154.chr10.nnic@NA	transcript6154.chr10.nnic	NA	127128380	127129579	Gene ID= novel_gene_chr10_6155 TPM= 2.34 Transcript Type= NA
chr10	127907072	128085855	127907072	128085855	+	transcript6156.chr10.nnic@PTPRE	transcript6156.chr10.nnic	protein_coding	127907072,127982274,128040875,128047390,128047764,128049530,128056123,128060939,128061679,128063083,128066075,128068123,128069692,128070301,128070808,128072138,128073337,128076603,128077617,128079560,128082832,128085073	127907309,127982296,128040990,128047489,128047837,128049666,128056213,128061015,128061715,128063180,128066194,128068286,128069827,128070450,128070901,128072214,128073471,128076728,128077783,128079695,128082940,128085855	Gene ID= ENSG00000132334.16 TPM= 5.84 Transcript Type= NA
chr10	127906816	128085855	127906816	128085855	+	transcript6157.chr10.nnic@PTPRE	transcript6157.chr10.nnic	protein_coding	127906816,127930978,127982274,128040875,128047390,128047764,128049530,128056123,128060939,128061679,128063083,128066075,128068123,128069692,128070301,128070808,128072138,128073337,128076603,128077617,128079560,128082832	127907309,127931133,127982296,128040990,128047489,128047837,128049666,128056213,128061015,128061715,128063180,128066194,128068286,128069827,128070450,128070901,128072214,128073471,128076728,128077783,128079695,128085855	Gene ID= ENSG00000132334.16 TPM= 6.13 Transcript Type= NA
chr10	127987281	128085855	127987281	128085855	+	transcript6165.chr10.nic@PTPRE	transcript6165.chr10.nic	protein_coding	127987281,128040875,128047390,128047764,128049530,128056123,128060939,128061679,128063083,128066075,128068123,128069692,128070301,128070808,128072138,128073337,128076603,128077617,128079560,128082832	127987395,128040990,128047489,128047837,128049666,128056213,128061015,128061715,128063180,128066194,128068286,128069827,128070450,128070901,128072214,128073471,128076728,128077783,128079695,128085855	Gene ID= ENSG00000132334.16 TPM= 6.13 Transcript Type= NA
chr10	128047596	128084043	128047596	128084043	+	transcript6174.chr10.nic@PTPRE	transcript6174.chr10.nic	protein_coding	128047596,128049530,128056123,128060939,128061679,128063083,128066075,128068123,128069692,128070301,128070808,128072138,128073337,128076603,128077617,128079560,128082832	128047837,128049666,128056213,128061015,128061715,128063180,128066194,128068286,128069827,128070450,128070901,128072214,128073471,128076728,128077783,128079695,128084043	Gene ID= ENSG00000132334.16 TPM= 2.34 Transcript Type= NA
chr10	127907061	128085855	127907061	128085855	+	ENST00000254667.7@PTPRE	ENST00000254667.7	protein_coding	127907061,127982274,128040875,128047390,128047764,128049530,128056123,128060939,128061679,128063083,128066075,128068123,128069692,128070301,128070808,128072138,128073337,128076603,128077617,128079560,128082832	127907309,127982296,128040990,128047489,128047837,128049666,128056213,128061015,128061715,128063180,128066194,128068286,128069827,128070450,128070901,128072214,128073471,128076728,128077783,128079695,128085855	Gene ID= ENSG00000132334.16 TPM= 45.83 Transcript Type= protein_coding
chr10	128047570	128085855	128047570	128085855	+	ENST00000306042.9@PTPRE	ENST00000306042.9	protein_coding	128047570,128047764,128049530,128056123,128060939,128061679,128063083,128066075,128068123,128069692,128070301,128070808,128072138,128073337,128076603,128077617,128079560,128082832	128047683,128047837,128049666,128056213,128061015,128061715,128063180,128066194,128068286,128069827,128070450,128070901,128072214,128073471,128076728,128077783,128079695,128085855	Gene ID= ENSG00000132334.16 TPM= 10.8 Transcript Type= protein_coding
chr10	128000441	128003520	128000441	128003520	+	transcript6181.chr10.nnic@NA	transcript6181.chr10.nnic	NA	128000441	128003520	Gene ID= novel_gene_chr10_6182 TPM= 2.34 Transcript Type= NA
chr10	128016483	128021710	128016483	128021710	-	transcript6183.chr10.nnic@NA	transcript6183.chr10.nnic	NA	128016483	128021710	Gene ID= novel_gene_chr10_6184 TPM= 5.84 Transcript Type= NA
chr10	128025134	128032269	128025134	128032269	-	transcript6185.chr10.nnic@NA	transcript6185.chr10.nnic	NA	128025134	128032269	Gene ID= novel_gene_chr10_6186 TPM= 2.34 Transcript Type= NA
chr10	129467244	129767104	129467244	129767104	+	transcript6192.chr10.nnic@MGMT	transcript6192.chr10.nnic	protein_coding	129467244,129536241,129707895,129759202,129766788	129467441,129536377,129708043,129759341,129767104	Gene ID= ENSG00000170430.9 TPM= 3.5 Transcript Type= NA
chr10	129467184	129768007	129467184	129768007	+	ENST00000306010.7@MGMT	ENST00000306010.7	protein_coding	129467184,129536241,129707895,129759202,129766788	129467296,129536377,129708043,129759341,129768007	Gene ID= ENSG00000170430.9 TPM= 2.34 Transcript Type= protein_coding
chr10	130063900	130110817	130063900	130110817	-	ENST00000637128.1@LINC00959	ENST00000637128.1	protein_coding	130110704,130079737,130079566,130063900	130110817,130079901,130079628,130064383	Gene ID= ENSG00000237489.3 TPM= 2.34 Transcript Type= protein_coding
chr10	130136381	130339693	130136381	130339693	+	transcript6197.chr10.nnic@GLRX3	transcript6197.chr10.nnic	protein_coding	130136381,130145211,130159995,130160796,130166507,130166919,130169433,130171584,130174867,130174997,130179342,130180113,130251907,130336754	130136512,130145319,130160069,130160997,130166679,130166980,130169490,130171636,130174906,130175089,130179420,130180321,130252065,130339693	Gene ID= ENSG00000108010.11 TPM= 2.34 Transcript Type= NA
chr10	130136381	130183643	130136381	130183643	+	transcript6201.chr10.nnic@GLRX3	transcript6201.chr10.nnic	protein_coding	130136381,130145211,130159995,130160796,130166507,130166919,130169433,130171584,130174867,130174997,130180113,130183285	130136512,130145319,130160069,130160997,130166679,130166980,130169490,130171636,130174906,130175089,130180321,130183643	Gene ID= ENSG00000108010.11 TPM= 3.5 Transcript Type= NA
chr10	130136399	130179664	130136399	130179664	+	ENST00000331244.9@GLRX3	ENST00000331244.9	protein_coding	130136399,130145211,130159995,130160796,130166507,130166919,130169433,130171584,130174867,130174997,130179342	130136512,130145319,130160069,130160997,130166679,130166980,130169490,130171636,130174906,130175089,130179664	Gene ID= ENSG00000108010.11 TPM= 4.67 Transcript Type= protein_coding
chr10	130176114	130178861	130176114	130178861	-	transcript6208.chr10.nnic@NA	transcript6208.chr10.nnic	NA	130176114	130178861	Gene ID= novel_gene_chr10_6209 TPM= 3.5 Transcript Type= NA
chr10	131900644	131959834	131900644	131959834	+	ENST00000455566.5@PPP2R2D	ENST00000455566.5	protein_coding	131900644,131901238,131934458,131940031,131940582,131943968,131945295,131947530,131955684	131901155,131901330,131934555,131940196,131940694,131944145,131945459,131947791,131959834	Gene ID= ENSG00000175470.18 TPM= 10.51 Transcript Type= protein_coding
chr10	131900961	131956555	131900961	131956555	+	transcript6221.chr10.nnic@PPP2R2D	transcript6221.chr10.nnic	protein_coding	131900961,131901238,131940031,131940582,131943968,131945295,131947530,131955684	131901155,131901330,131940196,131940694,131944145,131945459,131947791,131956555	Gene ID= ENSG00000175470.18 TPM= 17.51 Transcript Type= NA
chr10	131966455	131982013	131966455	131982013	-	ENST00000368636.8@BNIP3	ENST00000368636.8	protein_coding	131981761,131973793,131973034,131970864,131970638,131966455	131982013,131973943,131973118,131970970,131970787,131968569	Gene ID= ENSG00000176171.11 TPM= 7.01 Transcript Type= protein_coding
chr10	131967687	131981967	131967687	131981967	-	transcript6225.chr10.nic@BNIP3	transcript6225.chr10.nic	protein_coding	131981761,131973034,131970864,131970638,131967687	131981967,131973943,131970970,131970787,131968569	Gene ID= ENSG00000176171.11 TPM= 2.34 Transcript Type= NA
chr10	131968228	131981923	131968228	131981923	-	ENST00000540159.3@BNIP3	ENST00000540159.3	protein_coding	131981761,131973793,131973034,131970864,131968228	131981923,131973943,131973118,131970970,131970787	Gene ID= ENSG00000176171.11 TPM= 2.34 Transcript Type= protein_coding
chr10	132186900	132205776	132186900	132205776	+	ENST00000338492.8@DPYSL4	ENST00000338492.8	protein_coding	132186900,132190747,132192658,132194845,132196861,132197021,132198415,132198851,132200356,132200842,132201946,132202646,132203762,132204839	132187102,132190835,132192842,132195009,132196922,132197101,132198483,132198971,132200512,132200983,132202116,132202825,132203927,132205776	Gene ID= ENSG00000151640.12 TPM= 3.5 Transcript Type= protein_coding
chr10	132207492	132307940	132207492	132307940	-	ENST00000298630.7@STK32C	ENST00000298630.7	protein_coding	132307572,132245900,132227977,132226795,132225747,132225527,132225233,132224407,132222861,132222641,132209034,132207492	132307940,132245955,132228128,132226968,132225784,132225616,132225336,132224523,132222986,132222772,132209101,132208151	Gene ID= ENSG00000165752.16 TPM= 10.51 Transcript Type= protein_coding
chr10	132330281	132331837	132330281	132331837	-	ENST00000456004.1@STK32C	ENST00000456004.1	protein_coding	132331436,132330281	132331837,132330485	Gene ID= ENSG00000165752.16 TPM= 4.67 Transcript Type= protein_coding
chr10	132397196	132417859	132397196	132417859	+	transcript6246.chr10.nnic@PWWP2B	transcript6246.chr10.nnic	protein_coding	132397196,132404626,132409762,132417061	132397351,132406289,132409879,132417859	Gene ID= ENSG00000171813.13 TPM= 2.34 Transcript Type= NA
chr10	132397175	132417863	132397175	132417863	+	transcript6258.chr10.nnic@PWWP2B	transcript6258.chr10.nnic	protein_coding	132397175,132404626,132417061	132397298,132406289,132417863	Gene ID= ENSG00000171813.13 TPM= 4.67 Transcript Type= NA
chr10	132408594	132417859	132408594	132417859	+	transcript6261.chr10.nnic@PWWP2B	transcript6261.chr10.nnic	protein_coding	132408594,132409762,132417061	132408825,132409879,132417859	Gene ID= ENSG00000171813.13 TPM= 2.34 Transcript Type= NA
chr10	132397168	132417863	132397168	132417863	+	ENST00000305233.5@PWWP2B	ENST00000305233.5	protein_coding	132397168,132404626,132417061	132397351,132406289,132417863	Gene ID= ENSG00000171813.13 TPM= 92.24 Transcript Type= protein_coding
chr10	132520827	132522449	132520827	132522449	-	ENST00000445190.1@LINC01165	ENST00000445190.1	antisense_RNA	132520827	132522449	Gene ID= ENSG00000229081.1 TPM= 1.17 Transcript Type= antisense_RNA
chr10	132537820	132783480	132537820	132783480	+	ENST00000368594.7@INPP5A	ENST00000368594.7	protein_coding	132537820,132607915,132645868,132650418,132690392,132697816,132708313,132710337,132726821,132749517,132749771,132765773,132777671,132780849,132781861,132782037	132538171,132607956,132645968,132650505,132690455,132697919,132708365,132710456,132726905,132749612,132749845,132765846,132777782,132780917,132781948,132783480	Gene ID= ENSG00000068383.18 TPM= 105.08 Transcript Type= protein_coding
chr10	133237404	133241929	133237404	133241929	+	ENST00000325980.9@VENTX	ENST00000325980.9	protein_coding	133237404,133239676,133239932	133238155,133239836,133241929	Gene ID= ENSG00000151650.7 TPM= 4.67 Transcript Type= protein_coding
chr10	133257144	133257551	133257144	133257551	-	ENST00000611956.1@AL592071.1	ENST00000611956.1	lincRNA	133257144	133257551	Gene ID= ENSG00000273980.1 TPM= 1.17 Transcript Type= lincRNA
chr10	133262403	133276868	133262403	133276868	-	ENST00000445355.7@ADAM8	ENST00000445355.7	protein_coding	133276772,133275484,133274159,133273951,133273762,133273254,133272957,133272798,133272416,133272193,133271806,133271528,133271200,133270881,133270736,133270360,133269897,133269445,133268748,133267929,133267352,133263688,133262403	133276868,133275587,133274235,133274029,133273838,133273443,133273019,133272866,133272585,133272274,133271954,133271705,133271289,133271070,133270805,133270510,133269974,133269529,133268862,133268118,133267417,133263765,133263233	Gene ID= ENSG00000151651.15 TPM= 22.18 Transcript Type= protein_coding
chr10	133278630	133309156	133278630	133309156	-	ENST00000368563.6@TUBGCP2	ENST00000368563.6	protein_coding	133308823,133302792,133299985,133299427,133297952,133293562,133293039,133292499,133289824,133288840,133288129,133285456,133285085,133283882,133283078,133282223,133281273,133278630	133309156,133302980,133300113,133299603,133298111,133293769,133293238,133292688,133289969,133289020,133288309,133285628,133285213,133284002,133283221,133282342,133281436,133279901	Gene ID= ENSG00000130640.13 TPM= 5.84 Transcript Type= protein_coding
chr10	133278630	133309156	133278630	133309156	-	ENST00000417178.6@TUBGCP2	ENST00000417178.6	protein_coding	133308823,133299985,133299427,133297952,133293562,133293039,133292499,133289824,133288840,133288129,133285456,133285085,133283882,133283078,133282223,133281273,133278630	133309156,133300113,133299603,133298111,133293769,133293238,133292688,133289969,133289020,133288309,133285628,133285213,133284002,133283221,133282342,133281436,133279901	Gene ID= ENSG00000130640.13 TPM= 2.92 Transcript Type= protein_coding
chr10	133279642	133308871	133279642	133308871	-	transcript6304.chr10.nic@TUBGCP2	transcript6304.chr10.nic	protein_coding	133308823,133302792,133299985,133299427,133297952,133293562,133293039,133292499,133289824,133288840,133288129,133285085,133283882,133283078,133282223,133281273,133279642	133308871,133302980,133300113,133299603,133298111,133293769,133293238,133292688,133289969,133289020,133288309,133285628,133284002,133283221,133282342,133281436,133279901	Gene ID= ENSG00000130640.13 TPM= 5.25 Transcript Type= NA
chr10	133301701	133308848	133301701	133308848	-	ENST00000480198.1@TUBGCP2	ENST00000480198.1	protein_coding	133308823,133301701	133308848,133302980	Gene ID= ENSG00000130640.13 TPM= 1.17 Transcript Type= retained_intron
chr10	133308475	133313158	133308475	133313158	+	ENST00000361518.9@ZNF511	ENST00000361518.9	protein_coding	133308475,133309390,133309776,133310164,133311716,133312788	133309096,133309463,133309977,133310288,133311841,133313158	Gene ID= ENSG00000198546.14 TPM= 58.96 Transcript Type= protein_coding
chr10	133308941	133313162	133308941	133313162	+	ENST00000359035.4@ZNF511	ENST00000359035.4	protein_coding	133308941,133309390,133309776,133310164,133311716	133309096,133309463,133309977,133310288,133313162	Gene ID= ENSG00000198546.14 TPM= 2.92 Transcript Type= protein_coding
chr10	133355154	133358035	133355154	133358035	-	ENST00000278025.8@FUOM	ENST00000278025.8	protein_coding	133357923,133357187,133356943,133356640,133355738,133355154	133358035,133357255,133357013,133356738,133355811,133355436	Gene ID= ENSG00000148803.11 TPM= 6.62 Transcript Type= protein_coding
chr10	133355138	133358034	133355138	133358034	-	transcript6328.chr10.nic@FUOM	transcript6328.chr10.nic	protein_coding	133357923,133357187,133356943,133356640,133355138	133358034,133357255,133357013,133356738,133355811	Gene ID= ENSG00000148803.11 TPM= 3.12 Transcript Type= NA
chr10	133355160	133358025	133355160	133358025	-	ENST00000368552.7@FUOM	ENST00000368552.7	protein_coding	133357923,133357187,133356943,133356640,133355738,133355160	133358025,133357255,133357013,133356738,133355811,133355505	Gene ID= ENSG00000148803.11 TPM= 1.95 Transcript Type= protein_coding
chr10	133362480	133373689	133362480	133373689	-	ENST00000368547.3@ECHS1	ENST00000368547.3	protein_coding	133373246,133370560,133369904,133368923,133366889,133365976,133364658,133362480	133373689,133370757,133370031,133369022,133366993,133366095,133364725,133362933	Gene ID= ENSG00000127884.4 TPM= 248.7 Transcript Type= protein_coding
chr10	133379234	133391694	133379234	133391694	+	ENST00000278060.9@PAOX	ENST00000278060.9	protein_coding	133379234,133379999,133381460,133383960,133388956,133389590,133391312	133379497,133380485,133381659,133384212,133389068,133389747,133391694	Gene ID= ENSG00000148832.15 TPM= 22.18 Transcript Type= protein_coding
chr10	133379261	133391654	133379261	133391654	+	ENST00000357296.7@PAOX	ENST00000357296.7	protein_coding	133379261,133379999,133381460,133383960,133388956,133391312	133379497,133380485,133381659,133384212,133389068,133391654	Gene ID= ENSG00000148832.15 TPM= 2.34 Transcript Type= protein_coding
chr10	133394196	133421307	133394196	133421307	+	ENST00000460848.5@MTG1	ENST00000460848.5	protein_coding	133394196,133395713,133396163,133398435,133399170,133399529,133401529,133402692,133419480,133420026	133394332,133395777,133396267,133398515,133399226,133399619,133402245,133402773,133419592,133421307	Gene ID= ENSG00000148824.18 TPM= 1.17 Transcript Type= retained_intron
chr10	133394171	133420670	133394171	133420670	+	ENST00000317502.10@MTG1	ENST00000317502.10	protein_coding	133394171,133395713,133396163,133398435,133399170,133399529,133401529,133402149,133402692,133419480,133420026	133394332,133395777,133396267,133398515,133399226,133399619,133401590,133402245,133402773,133419592,133420670	Gene ID= ENSG00000148824.18 TPM= 1.17 Transcript Type= protein_coding
chr10	133404131	133406932	133404131	133406932	-	transcript6375.chr10.nnic@NA	transcript6375.chr10.nnic	NA	133404131	133406932	Gene ID= novel_gene_chr10_6376 TPM= 15.18 Transcript Type= NA
chr10	133406667	133410878	133406667	133410878	-	transcript6377.chr10.nnic@NA	transcript6377.chr10.nnic	NA	133406667	133410878	Gene ID= novel_gene_chr10_6378 TPM= 5.84 Transcript Type= NA
chr10	133411862	133416881	133411862	133416881	+	transcript6373.chr10.nnic@NA	transcript6373.chr10.nnic	NA	133411862	133416881	Gene ID= novel_gene_chr10_6374 TPM= 4.67 Transcript Type= NA
chr11	202926	207428	202926	207428	-	ENST00000382762.7@BET1L	ENST00000382762.7	protein_coding	207303,205952,205611,202926	207428,206043,205667,205469	Gene ID= ENSG00000177951.17 TPM= 106.83 Transcript Type= protein_coding
chr11	202924	207382	202924	207382	-	ENST00000325147.13@BET1L	ENST00000325147.13	protein_coding	207303,205952,202924	207382,206043,205667	Gene ID= ENSG00000177951.17 TPM= 15.76 Transcript Type= protein_coding
chr11	207492	215113	207492	215113	+	transcript16.chr11.nic@RIC8A	transcript16.chr11.nic	protein_coding	207492,209175,209407,210571,211199,212416,212615,212837,213299,214230	208938,209318,210000,210662,211349,212511,212759,212981,213418,215113	Gene ID= ENSG00000177963.14 TPM= 44.95 Transcript Type= NA
chr11	207511	215113	207511	215113	+	ENST00000526104.5@RIC8A	ENST00000526104.5	protein_coding	207511,209271,209407,210571,211199,212416,212615,212837,213299,214230	208938,209318,210000,210662,211349,212511,212759,212981,213418,215113	Gene ID= ENSG00000177963.14 TPM= 162.88 Transcript Type= protein_coding
chr11	215458	236431	215458	236431	-	ENST00000382743.8@SIRT3	ENST00000382743.8	protein_coding	236048,233343,232983,230452,224078,218832,215458	236431,233534,233215,230552,224239,219041,216718	Gene ID= ENSG00000142082.14 TPM= 4.67 Transcript Type= protein_coding
chr11	216179	236353	216179	236353	-	transcript48.chr11.nic@SIRT3	transcript48.chr11.nic	protein_coding	233343,232983,230452,224078,218832,216179	236353,233215,230641,224239,219041,216718	Gene ID= ENSG00000142082.14 TPM= 2.34 Transcript Type= NA
chr11	216179	236343	216179	236343	-	ENST00000532837.5@SIRT3	ENST00000532837.5	protein_coding	236194,233343,232983,230452,224078,218832,216179	236343,233534,233215,230552,224239,219041,216718	Gene ID= ENSG00000142082.14 TPM= 9.34 Transcript Type= nonsense_mediated_decay
chr11	236957	252981	236957	252981	+	transcript54.chr11.nic@PSMD13	transcript54.chr11.nic	protein_coding	236957,238998,244041,244161,244426,244675,247277,248776,248932,250803,252505	237144,239076,244075,244216,244469,244761,247448,248855,249057,250865,252981	Gene ID= ENSG00000185627.17 TPM= 18.68 Transcript Type= NA
chr11	237000	252966	237000	252966	+	ENST00000525665.5@PSMD13	ENST00000525665.5	protein_coding	237000,238998,244041,244426,244675,247277,248776,248932,250803,251546,251820,252505	237144,239076,244216,244469,244761,247448,248855,249057,250865,251626,251936,252966	Gene ID= ENSG00000185627.17 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr11	240103	242046	240103	242046	-	transcript60.chr11.nnic@NA	transcript60.chr11.nnic	NA	240103	242046	Gene ID= novel_gene_chr11_61 TPM= 23.35 Transcript Type= NA
chr11	289839	295676	289839	295676	+	transcript76.chr11.nnic@PGGHG	transcript76.chr11.nnic	protein_coding	289839,290413,290678,291976,292546,292886,293163,293366,293594,293830,294099,294267,294556	290048,290600,291113,292095,292677,292997,293235,293502,293727,293925,294196,294478,295676	Gene ID= ENSG00000142102.15 TPM= 32.69 Transcript Type= NA
chr11	291560	295683	291560	295683	+	ENST00000476372.1@PGGHG	ENST00000476372.1	protein_coding	291560,292546,292886,293163,293830,294099,294267,294556	292095,292677,292997,293727,293925,294196,294478,295683	Gene ID= ENSG00000142102.15 TPM= 25.69 Transcript Type= retained_intron
chr11	308535	309392	308535	309392	+	transcript87.chr11.nic@IFITM2	transcript87.chr11.nic	protein_coding	308535,309013	308889,309392	Gene ID= ENSG00000185201.16 TPM= 53.71 Transcript Type= NA
chr11	308320	309392	308320	309392	+	ENST00000527146.1@IFITM2	ENST00000527146.1	protein_coding	308320,308755,309013	308438,308889,309392	Gene ID= ENSG00000185201.16 TPM= 53.71 Transcript Type= nonsense_mediated_decay
chr11	308161	309396	308161	309396	+	transcript95.chr11.nnic@NA	transcript95.chr11.nnic	NA	308161	309396	Gene ID= novel_gene_chr11_96 TPM= 9.34 Transcript Type= NA
chr11	309529	311187	309529	311187	-	transcript97.chr11.nnic@NA	transcript97.chr11.nnic	NA	309529	311187	Gene ID= novel_gene_chr11_98 TPM= 10.51 Transcript Type= NA
chr11	313853	315272	313853	315272	+	ENST00000408968.3@IFITM1	ENST00000408968.3	protein_coding	313853,314922	314356,315272	Gene ID= ENSG00000185885.15 TPM= 171.64 Transcript Type= protein_coding
chr11	314040	315271	314040	315271	+	transcript93.chr11.nnic@NA	transcript93.chr11.nnic	NA	314040	315271	Gene ID= novel_gene_chr11_94 TPM= 7.01 Transcript Type= NA
chr11	316808	318995	316808	318995	-	transcript101.chr11.nnic@NA	transcript101.chr11.nnic	NA	316808	318995	Gene ID= novel_gene_chr11_102 TPM= 3.5 Transcript Type= NA
chr11	319669	321050	319669	321050	-	ENST00000399808.4@IFITM3	ENST00000399808.4	protein_coding	320565,319669	321050,319990	Gene ID= ENSG00000142089.15 TPM= 727.41 Transcript Type= protein_coding
chr11	319675	320854	319675	320854	-	transcript99.chr11.nnic@NA	transcript99.chr11.nnic	NA	319675	320854	Gene ID= novel_gene_chr11_100 TPM= 127.27 Transcript Type= NA
chr11	394132	404908	394132	404908	+	transcript105.chr11.nic@PKP3	transcript105.chr11.nic	protein_coding	394132,394329,396608,396814,397539,398992,399967,400334,400535,403078,403618,403943,404236,404534	394183,394524,396687,397445,397662,399196,400141,400451,400705,403263,403771,404135,404323,404908	Gene ID= ENSG00000184363.9 TPM= 10.51 Transcript Type= NA
chr11	394142	404908	394142	404908	+	transcript112.chr11.nic@PKP3	transcript112.chr11.nic	protein_coding	394142,396608,396814,397539,398992,399967,400535,403078,403618,403943,404236,404534	394524,396687,397445,397662,399196,400451,400705,403263,403771,404135,404323,404908	Gene ID= ENSG00000184363.9 TPM= 9.34 Transcript Type= NA
chr11	394193	404908	394193	404908	+	transcript115.chr11.nic@PKP3	transcript115.chr11.nic	protein_coding	394193,396608,396814,397539,398992,399967,403078,403618,403943,404236,404534	394524,396687,397445,397662,399196,400705,403263,403771,404135,404323,404908	Gene ID= ENSG00000184363.9 TPM= 5.84 Transcript Type= NA
chr11	394217	404908	394217	404908	+	ENST00000331563.6@PKP3	ENST00000331563.6	protein_coding	394217,396608,396814,397539,398992,399967,400334,400535,403078,403618,403943,404236,404534	394524,396687,397445,397662,399196,400141,400451,400705,403263,403771,404135,404323,404908	Gene ID= ENSG00000184363.9 TPM= 154.12 Transcript Type= protein_coding
chr11	405716	415026	405716	415026	-	transcript120.chr11.nic@SIGIRR	transcript120.chr11.nic	protein_coding	414823,409868,408695,408073,407817,407425,407062,406843,406142,405716	415026,410027,408893,408206,407957,407568,407164,406993,406538,406059	Gene ID= ENSG00000185187.12 TPM= 4.09 Transcript Type= NA
chr11	405716	417633	405716	417633	-	transcript121.chr11.nic@SIGIRR	transcript121.chr11.nic	protein_coding	417294,409868,408695,408073,407817,407425,407062,406843,406142,405716	417633,410027,408893,408206,407957,407568,407164,406993,406538,406059	Gene ID= ENSG00000185187.12 TPM= 6.42 Transcript Type= NA
chr11	405716	417397	405716	417397	-	ENST00000332725.7@SIGIRR	ENST00000332725.7	protein_coding	417325,409868,408695,408073,407817,407425,407062,406843,406349,405716	417397,410027,408893,408206,407957,407568,407164,406993,406538,406059	Gene ID= ENSG00000185187.12 TPM= 28.92 Transcript Type= protein_coding
chr11	405716	414976	405716	414976	-	ENST00000431843.6@SIGIRR	ENST00000431843.6	protein_coding	414823,409868,408695,408073,407817,407425,407062,406843,406349,405716	414976,410027,408893,408206,407957,407568,407164,406993,406538,406059	Gene ID= ENSG00000185187.12 TPM= 16.08 Transcript Type= protein_coding
chr11	405716	414992	405716	414992	-	transcript137.chr11.nic@SIGIRR	transcript137.chr11.nic	protein_coding	414823,408073,407817,407425,407062,406843,406349,405716	414992,408206,407957,407568,407164,406993,406538,406059	Gene ID= ENSG00000185187.12 TPM= 5.95 Transcript Type= NA
chr11	405716	407135	405716	407135	-	ENST00000526395.5@SIGIRR	ENST00000526395.5	protein_coding	407062,406349,405716	407135,406538,406059	Gene ID= ENSG00000185187.12 TPM= 8.87 Transcript Type= protein_coding
chr11	405716	417325	405716	417325	-	ENST00000397632.7@SIGIRR	ENST00000397632.7	protein_coding	417294,409868,408695,408073,407817,407425,407062,406843,406349,405716	417325,410027,408893,408206,407957,407568,407164,406993,406538,406059	Gene ID= ENSG00000185187.12 TPM= 10.24 Transcript Type= protein_coding
chr11	417938	441996	417938	441996	-	ENST00000532094.5@ANO9	ENST00000532094.5	protein_coding	441921,434024,433815,431694,430269,429570,428722,428475,428358,428088,421141,420945,419582,418888,418720,417938	441996,434098,433937,433459,430403,430179,428826,428639,428394,428199,421198,421042,420860,418989,418813,418589	Gene ID= ENSG00000185101.12 TPM= 9.34 Transcript Type= retained_intron
chr11	450271	491399	450271	491399	+	transcript149.chr11.nic@PTDSS2	transcript149.chr11.nic	protein_coding	450271,460187,473895,479085,486939,487420,488199,488529,489400,489588,489883,490420,491121	450637,460288,473977,479152,487073,487470,488312,488647,489514,489733,490068,490642,491399	Gene ID= ENSG00000174915.11 TPM= 6.07 Transcript Type= NA
chr11	450307	491387	450307	491387	+	transcript150.chr11.nic@PTDSS2	transcript150.chr11.nic	protein_coding	450307,451352,460187,473895,479085,486939,487420,488199,488529,489400,489588,489883,490420	450637,451493,460288,473977,479152,487073,487470,488312,488647,489514,489733,490068,491387	Gene ID= ENSG00000174915.11 TPM= 2.57 Transcript Type= NA
chr11	450271	491387	450271	491387	+	transcript152.chr11.nnic@PTDSS2	transcript152.chr11.nnic	protein_coding	450271,460187,473895,479085,486891,487420,488199,488529,489400,489588,489883,490420	450637,460288,473977,479152,487073,487470,488312,488647,489514,489733,490068,491387	Gene ID= ENSG00000174915.11 TPM= 2.57 Transcript Type= NA
chr11	450271	491387	450271	491387	+	transcript160.chr11.nic@PTDSS2	transcript160.chr11.nic	protein_coding	450271,460187,479085,486939,487420,488199,488529,489400,489588,489883,490420	450637,460288,479152,487073,487470,488312,488647,489514,489733,490068,491387	Gene ID= ENSG00000174915.11 TPM= 3.74 Transcript Type= NA
chr11	450352	463899	450352	463899	+	transcript168.chr11.nnic@PTDSS2	transcript168.chr11.nnic	protein_coding	450352,460187,463568	450637,460288,463899	Gene ID= ENSG00000174915.11 TPM= 2.34 Transcript Type= NA
chr11	450280	491387	450280	491387	+	ENST00000308020.5@PTDSS2	ENST00000308020.5	protein_coding	450280,460187,473895,479085,486939,487420,488199,488529,489400,489588,489883,490420	450637,460288,473977,479152,487073,487470,488312,488647,489514,489733,490068,491387	Gene ID= ENSG00000174915.11 TPM= 60.95 Transcript Type= protein_coding
chr11	482224	486878	482224	486878	-	transcript170.chr11.nnic@NA	transcript170.chr11.nnic	NA	485741,482224	486878,485699	Gene ID= novel_gene_chr11_171 TPM= 5.84 Transcript Type= NA
chr11	494515	506955	494515	506955	-	transcript174.chr11.nic@RNH1	transcript174.chr11.nic	protein_coding	506609,504824,502062,500484,499829,499015,498763,498457,497971,494883,494515	506955,504996,502181,500654,499999,499185,498933,498627,498141,495053,494778	Gene ID= ENSG00000023191.16 TPM= 29.28 Transcript Type= NA
chr11	494515	504709	494515	504709	-	transcript188.chr11.nic@RNH1	transcript188.chr11.nic	protein_coding	504427,502062,500484,499829,499015,498763,498457,497971,494883,494515	504709,502181,500654,499999,499185,498933,498627,498141,495053,494778	Gene ID= ENSG00000023191.16 TPM= 32.79 Transcript Type= NA
chr11	494515	504709	494515	504709	-	transcript191.chr11.nnic@RNH1	transcript191.chr11.nnic	protein_coding	504427,502062,500484,499829,499015,498763,498457,497971,494883,494515	504709,502249,500654,499999,499185,498933,498627,498141,495053,494778	Gene ID= ENSG00000023191.16 TPM= 96.61 Transcript Type= NA
chr11	494513	506821	494513	506821	-	ENST00000397614.5@RNH1	ENST00000397614.5	protein_coding	506609,502062,500484,499829,499015,498763,498457,497971,494883,494513	506821,502249,500654,499999,499185,498933,498627,498141,495053,494778	Gene ID= ENSG00000023191.16 TPM= 45 Transcript Type= protein_coding
chr11	494515	507253	494515	507253	-	ENST00000397604.7@RNH1	ENST00000397604.7	protein_coding	507113,502062,500484,499829,499015,498763,498457,497971,494883,494515	507253,502181,500654,499999,499185,498933,498627,498141,495053,494778	Gene ID= ENSG00000023191.16 TPM= 199.75 Transcript Type= protein_coding
chr11	494546	507218	494546	507218	-	ENST00000533410.5@RNH1	ENST00000533410.5	protein_coding	507113,504824,502062,500484,499829,499015,498763,498457,497971,494883,494546	507218,504996,502181,500654,499999,499185,498933,498627,498141,495053,494778	Gene ID= ENSG00000023191.16 TPM= 51.49 Transcript Type= protein_coding
chr11	494515	506800	494515	506800	-	ENST00000397615.6@RNH1	ENST00000397615.6	protein_coding	506609,504824,502062,500484,499829,499015,498763,498457,497971,494883,494515	506800,504996,502249,500654,499999,499185,498933,498627,498141,495053,494778	Gene ID= ENSG00000023191.16 TPM= 201.69 Transcript Type= protein_coding
chr11	494548	506785	494548	506785	-	ENST00000438658.6@RNH1	ENST00000438658.6	protein_coding	506609,502062,500484,499829,499015,498763,498457,497971,494883,494548	506785,502181,500654,499999,499185,498933,498627,498141,495053,494778	Gene ID= ENSG00000023191.16 TPM= 12.96 Transcript Type= protein_coding
chr11	494561	507300	494561	507300	-	ENST00000356187.9@RNH1	ENST00000356187.9	protein_coding	507113,502062,500484,499829,499015,498763,498457,497971,494883,494561	507300,502249,500654,499999,499185,498933,498627,498141,495053,494778	Gene ID= ENSG00000023191.16 TPM= 281.51 Transcript Type= protein_coding
chr11	494552	507221	494552	507221	-	ENST00000354420.6@RNH1	ENST00000354420.6	protein_coding	507113,504824,502062,500484,499829,499015,498763,498457,497971,494883,494552	507221,504996,502249,500654,499999,499185,498933,498627,498141,495053,494778	Gene ID= ENSG00000023191.16 TPM= 36.31 Transcript Type= protein_coding
chr11	532242	535260	532242	535260	-	transcript247.chr11.nic@HRAS	transcript247.chr11.nic	protein_coding	534212,533766,533453,533277,532631,532242	535260,533944,533612,533358,532755,532522	Gene ID= ENSG00000174775.16 TPM= 2.34 Transcript Type= NA
chr11	532242	535592	532242	535592	-	transcript260.chr11.nic@HRAS	transcript260.chr11.nic	protein_coding	533766,533453,533277,532631,532242	535592,533612,533358,532755,532522	Gene ID= ENSG00000174775.16 TPM= 2.34 Transcript Type= NA
chr11	532242	535580	532242	535580	-	transcript263.chr11.nnic@HRAS	transcript263.chr11.nnic	protein_coding	535416,533766,533453,532631,532242	535580,533944,533612,532755,532522	Gene ID= ENSG00000174775.16 TPM= 7.79 Transcript Type= NA
chr11	532242	535538	532242	535538	-	ENST00000493230.5@HRAS	ENST00000493230.5	protein_coding	535416,534212,533766,533453,533277,532631,532242	535538,534375,533944,533612,533358,532755,532522	Gene ID= ENSG00000174775.16 TPM= 7.79 Transcript Type= nonsense_mediated_decay
chr11	532243	535550	532243	535550	-	ENST00000417302.5@HRAS	ENST00000417302.5	protein_coding	535416,534212,533766,533453,533277,532243	535550,534375,533944,533612,533358,532755	Gene ID= ENSG00000174775.16 TPM= 6.62 Transcript Type= protein_coding
chr11	554855	560738	554855	560738	-	transcript221.chr11.nnic@LMNTD2	transcript221.chr11.nnic	protein_coding	560683,558856,558614,558161,557884,557572,557399,556492,556192,555996,555734,555305,554855	560738,558979,558766,558248,558054,557640,557487,557097,556375,556115,555930,555503,555111	Gene ID= ENSG00000185522.8 TPM= 6.42 Transcript Type= NA
chr11	554864	560779	554864	560779	-	ENST00000329451.7@LMNTD2	ENST00000329451.7	protein_coding	560683,558856,558614,558161,557884,557572,557399,556835,556492,556192,555996,555734,555305,554864	560779,558979,558766,558248,558039,557640,557487,557097,556588,556375,556115,555930,555503,555111	Gene ID= ENSG00000185522.8 TPM= 5.25 Transcript Type= protein_coding
chr11	560923	564018	560923	564018	+	transcript244.chr11.nic@RASSF7	transcript244.chr11.nic	protein_coding	560923,561762,562079,563189,563396,563558	561033,561892,562776,563317,563478,564018	Gene ID= ENSG00000099849.14 TPM= 22.16 Transcript Type= NA
chr11	560923	564021	560923	564021	+	transcript254.chr11.nic@RASSF7	transcript254.chr11.nic	protein_coding	560923,561762,562079,563189,563558	561033,561892,562776,563317,564021	Gene ID= ENSG00000099849.14 TPM= 41.43 Transcript Type= NA
chr11	561024	564012	561024	564012	+	transcript276.chr11.nic@RASSF7	transcript276.chr11.nic	protein_coding	561024,561762,562079,563189	561477,561892,562776,564012	Gene ID= ENSG00000099849.14 TPM= 30.94 Transcript Type= NA
chr11	561052	564018	561052	564018	+	ENST00000397583.7@RASSF7	ENST00000397583.7	protein_coding	561052,561762,562079,563189,563396,563558	561477,561892,562776,563317,563478,564018	Gene ID= ENSG00000099849.14 TPM= 50.18 Transcript Type= protein_coding
chr11	567017	568489	567017	568489	-	transcript316.chr11.nnic@NA	transcript316.chr11.nnic	NA	567017	568489	Gene ID= novel_gene_chr11_317 TPM= 3.5 Transcript Type= NA
chr11	573807	575880	573807	575880	-	transcript320.chr11.nnic@NA	transcript320.chr11.nnic	NA	573807	575880	Gene ID= novel_gene_chr11_321 TPM= 3.5 Transcript Type= NA
chr11	612555	615950	612555	615950	-	transcript292.chr11.nic@IRF7	transcript292.chr11.nic	protein_coding	615913,615345,615097,614797,614476,613951,613785,613206,612999,612555	615950,615647,615259,615007,614534,614037,613865,613595,613117,612800	Gene ID= ENSG00000185507.19 TPM= 21.8 Transcript Type= NA
chr11	612555	615950	612555	615950	-	transcript293.chr11.nic@IRF7	transcript293.chr11.nic	protein_coding	615913,615345,615097,614797,614476,613951,613785,613206,612999,612555	615950,615647,615259,615007,614534,614399,613865,613595,613117,612800	Gene ID= ENSG00000185507.19 TPM= 8.96 Transcript Type= NA
chr11	612555	615950	612555	615950	-	transcript294.chr11.nic@IRF7	transcript294.chr11.nic	protein_coding	615913,615345,615097,614797,614476,614174,613785,613206,612999,612555	615950,615647,615259,615007,614534,614399,613865,613595,613117,612800	Gene ID= ENSG00000185507.19 TPM= 7.88 Transcript Type= NA
chr11	612555	616041	612555	616041	-	transcript297.chr11.nic@IRF7	transcript297.chr11.nic	protein_coding	615913,615097,614797,614476,613951,613785,613206,612999,612555	616041,615647,615007,614534,614037,613865,613595,613117,612800	Gene ID= ENSG00000185507.19 TPM= 23.13 Transcript Type= NA
chr11	612555	615950	612555	615950	-	transcript298.chr11.nic@IRF7	transcript298.chr11.nic	protein_coding	615913,615097,614797,614476,614174,613785,613206,612999,612555	615950,615647,615007,614534,614399,613865,613595,613117,612800	Gene ID= ENSG00000185507.19 TPM= 5.72 Transcript Type= NA
chr11	612555	616041	612555	616041	-	transcript305.chr11.nic@IRF7	transcript305.chr11.nic	protein_coding	615913,615097,614797,614476,613785,613206,612999,612555	616041,615647,615007,614534,614037,613595,613117,612800	Gene ID= ENSG00000185507.19 TPM= 6.89 Transcript Type= NA
chr11	612559	615999	612559	615999	-	ENST00000397574.6@IRF7	ENST00000397574.6	protein_coding	615913,615345,615097,614797,614476,614174,613951,613785,613206,612999,612559	615999,615647,615259,615007,614534,614399,614037,613865,613595,613117,612800	Gene ID= ENSG00000185507.19 TPM= 75.79 Transcript Type= protein_coding
chr11	612555	615650	612555	615650	-	ENST00000348655.10@IRF7	ENST00000348655.10	protein_coding	615345,615097,614797,614476,614174,613785,613206,612999,612555	615650,615259,615007,614534,614399,613865,613595,613117,612800	Gene ID= ENSG00000185507.19 TPM= 3.21 Transcript Type= protein_coding
chr11	612561	615950	612561	615950	-	ENST00000533182.5@IRF7	ENST00000533182.5	protein_coding	615913,615345,615097,614797,614476,613785,613206,612999,612561	615950,615647,615259,615007,614534,614037,613595,613117,612800	Gene ID= ENSG00000185507.19 TPM= 7.78 Transcript Type= nonsense_mediated_decay
chr11	612591	615970	612591	615970	-	ENST00000330243.9@IRF7	ENST00000330243.9	protein_coding	615913,615097,614797,614476,614174,613951,613785,613206,612999,612591	615970,615647,615007,614534,614399,614037,613865,613595,613117,612800	Gene ID= ENSG00000185507.19 TPM= 16.6 Transcript Type= protein_coding
chr11	612591	615983	612591	615983	-	ENST00000532326.5@IRF7	ENST00000532326.5	protein_coding	615913,615345,615097,614797,614476,613785,613206,612999,612591	615983,615647,615259,615007,614531,613865,613595,613117,612800	Gene ID= ENSG00000185507.19 TPM= 7.1 Transcript Type= nonsense_mediated_decay
chr11	612588	613591	612588	613591	-	ENST00000531912.1@IRF7	ENST00000531912.1	protein_coding	612999,612588	613591,612800	Gene ID= ENSG00000185507.19 TPM= 1.17 Transcript Type= retained_intron
chr11	612583	615650	612583	615650	-	ENST00000469048.5@IRF7	ENST00000469048.5	protein_coding	615345,615097,614797,614476,613951,613785,613206,612999,612583	615650,615259,615007,614534,614037,613865,613595,613117,612800	Gene ID= ENSG00000185507.19 TPM= 4.76 Transcript Type= nonsense_mediated_decay
chr11	644233	695055	644233	695055	-	transcript351.chr11.nic@DEAF1	transcript351.chr11.nic	protein_coding	694679,691501,688331,687911,686858,684898,680963,679688,678694,674536,653962,644233	695055,691598,688460,688057,686997,684963,681089,679816,678822,674783,654051,644654	Gene ID= ENSG00000177030.16 TPM= 15.18 Transcript Type= NA
chr11	674372	696454	674372	696454	-	transcript354.chr11.nic@DEAF1	transcript354.chr11.nic	protein_coding	694759,691501,688331,687911,686858,684898,680963,679688,678694,674372	696454,691598,688460,688057,686997,684963,681089,679816,678822,674783	Gene ID= ENSG00000177030.16 TPM= 10.51 Transcript Type= NA
chr11	706117	727724	706117	727724	+	ENST00000533256.5@EPS8L2	ENST00000533256.5	protein_coding	706117,706677,709330,709553,710422,720062,720597,720830,721064,721285,721565,721903,722091,722401,722673,723241,724724,725728,726098,726304,726619,726901	706288,706801,709451,709608,710486,720223,720746,720909,721206,721352,721691,721991,722165,722549,722805,723353,724829,725847,726170,726484,726751,727724	Gene ID= ENSG00000177106.14 TPM= 24.64 Transcript Type= protein_coding
chr11	706214	727724	706214	727724	+	transcript332.chr11.nic@EPS8L2	transcript332.chr11.nic	protein_coding	706214,706674,709330,709553,710422,720062,720597,720830,721064,721285,721565,721903,722091,722673,723241,724724,725728,726098,726304,726619,726901	706288,706801,709451,709608,710486,720223,720746,720909,721206,721352,721691,721991,722549,722805,723353,724829,725847,726170,726484,726751,727724	Gene ID= ENSG00000177106.14 TPM= 31.35 Transcript Type= NA
chr11	706120	727726	706120	727726	+	ENST00000614442.4@EPS8L2	ENST00000614442.4	protein_coding	706120,709330,709553,710422,720062,720549,720830,721064,721285,721565,721903,722091,722401,722673,723241,724724,725728,726098,726304,726619,726901	706288,709451,709608,710486,720223,720746,720909,721206,721352,721691,721991,722165,722549,722805,723353,724829,725847,726170,726484,726751,727726	Gene ID= ENSG00000177106.14 TPM= 34.56 Transcript Type= protein_coding
chr11	706113	727727	706113	727727	+	ENST00000318562.12@EPS8L2	ENST00000318562.12	protein_coding	706113,709330,709553,710422,720062,720597,720830,721064,721285,721565,721903,722091,722401,722673,723241,724724,725728,726098,726304,726619,726901	706288,709451,709608,710486,720223,720746,720909,721206,721352,721691,721991,722165,722549,722805,723353,724829,725847,726170,726484,726751,727727	Gene ID= ENSG00000177106.14 TPM= 161.24 Transcript Type= protein_coding
chr11	706224	727721	706224	727721	+	ENST00000526909.5@EPS8L2	ENST00000526909.5	protein_coding	706224,709330,709553,720062,720597,720830,721064,721285,721565,721903,722091,722401,722673,723241,724724,725728,726098,726304,726619,726901	706288,709451,710486,720223,720746,720909,721206,721352,721691,721991,722165,722549,722805,723353,724829,725847,726170,726484,726751,727721	Gene ID= ENSG00000177106.14 TPM= 16.75 Transcript Type= nonsense_mediated_decay
chr11	694661	704129	694661	704129	+	transcript357.chr11.nic@TMEM80	transcript357.chr11.nic	protein_coding	694661,698869,700142,700615,702945,703800	695846,698888,700235,700707,703146,704129	Gene ID= ENSG00000177042.14 TPM= 7.59 Transcript Type= NA
chr11	695643	704129	695643	704129	+	ENST00000397512.7@TMEM80	ENST00000397512.7	protein_coding	695643,698869,700142,700615,702945	695822,698888,700235,700707,704129	Gene ID= ENSG00000177042.14 TPM= 29.77 Transcript Type= protein_coding
chr11	701408	705561	701408	705561	-	transcript369.chr11.nnic@NA	transcript369.chr11.nnic	NA	701408	705561	Gene ID= novel_gene_chr11_370 TPM= 33.86 Transcript Type= NA
chr11	747329	765024	747329	765024	+	ENST00000319006.7@TALDO1	ENST00000319006.7	protein_coding	747329,755879,758950,760122,763344,763747,764288,764813	747578,756002,759057,760253,763519,763944,764433,765024	Gene ID= ENSG00000177156.10 TPM= 301.82 Transcript Type= protein_coding
chr11	747428	765012	747428	765012	+	ENST00000528097.5@TALDO1	ENST00000528097.5	protein_coding	747428,755879,758950,760122,763344,763747,764288,764813	747578,756002,759057,760253,763519,763940,764433,765012	Gene ID= ENSG00000177156.10 TPM= 5.25 Transcript Type= protein_coding
chr11	767228	777475	767228	777475	-	transcript404.chr11.nnic@GATD1	transcript404.chr11.nnic	protein_coding	777399,775066,774008,773522,772427,771520,769617,767228	777475,775142,774113,773629,772521,771573,771426,767859	Gene ID= ENSG00000177225.16 TPM= 4.67 Transcript Type= NA
chr11	767230	777487	767230	777487	-	transcript409.chr11.nnic@GATD1	transcript409.chr11.nnic	protein_coding	777399,775066,774008,773522,772427,769800,767230	777487,775142,774113,773629,772521,771426,767867	Gene ID= ENSG00000177225.16 TPM= 4.67 Transcript Type= NA
chr11	777608	784297	777608	784297	+	ENST00000525941.1@AP006621.3	ENST00000525941.1	lincRNA	777608,778113,783530,784024	777695,778218,783671,784297	Gene ID= ENSG00000255284.1 TPM= 2.34 Transcript Type= lincRNA
chr11	778868	781739	778868	781739	-	transcript427.chr11.nnic@NA	transcript427.chr11.nnic	NA	778868	781739	Gene ID= novel_gene_chr11_428 TPM= 21.02 Transcript Type= NA
chr11	790475	795430	790475	795430	-	transcript395.chr11.nic@SLC25A22	transcript395.chr11.nic	protein_coding	795340,794987,794776,794458,793529,792870,792553,792304,792142,790475	795430,795169,794901,794513,793619,792988,792727,792458,792217,792068	Gene ID= ENSG00000177542.10 TPM= 11.77 Transcript Type= NA
chr11	790475	798333	790475	798333	-	ENST00000628067.2@SLC25A22	ENST00000628067.2	protein_coding	798217,794987,794776,794458,793529,792870,792553,792304,792142,790475	798333,795169,794901,794513,793619,792988,792727,792458,792217,792068	Gene ID= ENSG00000177542.10 TPM= 24.61 Transcript Type= protein_coding
chr11	790475	794366	790475	794366	-	transcript412.chr11.nic@SLC25A22	transcript412.chr11.nic	protein_coding	792870,792553,792304,792142,790475	794366,792727,792458,792217,792068	Gene ID= ENSG00000177542.10 TPM= 6.71 Transcript Type= NA
chr11	790475	796263	790475	796263	-	ENST00000320230.9@SLC25A22	ENST00000320230.9	protein_coding	796043,794987,794776,794458,793529,792870,792553,792304,792142,790475	796263,795169,794901,794513,793619,792988,792727,792458,792217,792068	Gene ID= ENSG00000177542.10 TPM= 10.6 Transcript Type= protein_coding
chr11	809647	812875	809647	812875	+	ENST00000321153.8@RPLP2	ENST00000321153.8	protein_coding	809647,810234,811597,812535,812760	810039,810357,811645,812633,812875	Gene ID= ENSG00000177600.8 TPM= 342.69 Transcript Type= protein_coding
chr11	809965	812880	809965	812880	+	ENST00000532004.5@RPLP2	ENST00000532004.5	protein_coding	809965,811597,812535,812760	810048,811645,812633,812880	Gene ID= ENSG00000177600.8 TPM= 16.93 Transcript Type= processed_transcript
chr11	819150	825218	819150	825218	+	transcript433.chr11.nic@PNPLA2	transcript433.chr11.nic	protein_coding	819150,821628,821958,822397,823527,823694,823998,824314,824523	819905,821860,822023,822606,823587,823855,824130,824436,825218	Gene ID= ENSG00000177666.16 TPM= 82.28 Transcript Type= NA
chr11	819322	825218	819322	825218	+	transcript436.chr11.nic@PNPLA2	transcript436.chr11.nic	protein_coding	819322,821958,822397,823527,823694,823998,824314,824523	821860,822023,822606,823587,823855,824130,824436,825218	Gene ID= ENSG00000177666.16 TPM= 13.98 Transcript Type= NA
chr11	819427	825218	819427	825218	+	transcript437.chr11.nnic@PNPLA2	transcript437.chr11.nnic	protein_coding	819427,820802,821958,822397,823527,823998,824314,824523	820703,821860,822023,822606,823855,824130,824436,825218	Gene ID= ENSG00000177666.16 TPM= 9.11 Transcript Type= NA
chr11	823543	825218	823543	825218	+	ENST00000529255.1@PNPLA2	ENST00000529255.1	protein_coding	823543,823694,824314,824523	823587,824130,824436,825218	Gene ID= ENSG00000177666.16 TPM= 39.46 Transcript Type= retained_intron
chr11	823726	825216	823726	825216	+	transcript438.chr11.nnic@NA	transcript438.chr11.nnic	NA	823726	825216	Gene ID= novel_gene_chr11_439 TPM= 3.5 Transcript Type= NA
chr11	826919	831986	826919	831986	+	transcript443.chr11.nic@CRACR2B	transcript443.chr11.nic	protein_coding	826919,828260,828852,829360,829986,830250,830621,830866,831224,831535	827459,828772,828963,829540,830132,830337,830713,831032,831295,831986	Gene ID= ENSG00000177685.16 TPM= 11.69 Transcript Type= NA
chr11	827271	831986	827271	831986	+	transcript448.chr11.nic@CRACR2B	transcript448.chr11.nic	protein_coding	827271,828230,828852,829360,829986,830250,830621,830866,831224,831535	827459,828772,829183,829540,830132,830337,830713,831032,831295,831986	Gene ID= ENSG00000177685.16 TPM= 12.18 Transcript Type= NA
chr11	827294	831986	827294	831986	+	transcript451.chr11.nnic@CRACR2B	transcript451.chr11.nnic	protein_coding	827294,828230,828852,829360,829986,830250,830621,830866,831224,831535	827711,828772,828963,829540,830132,830337,830713,831032,831295,831986	Gene ID= ENSG00000177685.16 TPM= 8.18 Transcript Type= NA
chr11	827585	831986	827585	831986	+	transcript466.chr11.nic@CRACR2B	transcript466.chr11.nic	protein_coding	827585,828852,829360,829986,830250,830621,830866,831535	828772,828963,829540,830132,830337,830713,831295,831986	Gene ID= ENSG00000177685.16 TPM= 5.64 Transcript Type= NA
chr11	827296	831986	827296	831986	+	transcript467.chr11.nic@CRACR2B	transcript467.chr11.nic	protein_coding	827296,828852,829986,830250,830621,830866,831224,831535	828772,829540,830132,830337,830713,831032,831295,831986	Gene ID= ENSG00000177685.16 TPM= 6.67 Transcript Type= NA
chr11	827108	831986	827108	831986	+	transcript479.chr11.nic@CRACR2B	transcript479.chr11.nic	protein_coding	827108,828852,829986,830250,831535	828772,829540,830132,831295,831986	Gene ID= ENSG00000177685.16 TPM= 3.89 Transcript Type= NA
chr11	829307	831985	829307	831985	+	ENST00000528694.1@CRACR2B	ENST00000528694.1	protein_coding	829307,831535	831295,831985	Gene ID= ENSG00000177685.16 TPM= 4.33 Transcript Type= retained_intron
chr11	832843	838829	832843	838829	+	ENST00000397420.7@CD151	ENST00000397420.7	protein_coding	832843,834530,836063,836251,836769,837250,837460,837942,838133	833022,834591,836153,836442,836843,837354,837618,838028,838829	Gene ID= ENSG00000177697.17 TPM= 338.89 Transcript Type= protein_coding
chr11	832923	838829	832923	838829	+	transcript507.chr11.nic@CD151	transcript507.chr11.nic	protein_coding	832923,834530,836063,836251,837250,837460,837942,838133	833026,834591,836153,836843,837354,837618,838028,838829	Gene ID= ENSG00000177697.17 TPM= 20.72 Transcript Type= NA
chr11	832952	838834	832952	838834	+	ENST00000397421.5@CD151	ENST00000397421.5	protein_coding	832952,836063,836251,836769,837250,837460,837942,838133	833026,836153,836442,836843,837354,837618,838028,838834	Gene ID= ENSG00000177697.17 TPM= 252.29 Transcript Type= protein_coding
chr11	832952	838834	832952	838834	+	ENST00000322008.8@CD151	ENST00000322008.8	protein_coding	832952,834530,836063,836251,836769,837250,837460,837942,838133	833026,834591,836153,836442,836843,837354,837618,838028,838834	Gene ID= ENSG00000177697.17 TPM= 320.6 Transcript Type= protein_coding
chr11	833009	838831	833009	838831	+	ENST00000530726.5@CD151	ENST00000530726.5	protein_coding	833009,834530,836063,836251,836769,837250,837460,837942,838133,838445	833022,834591,836153,836442,836843,837354,837618,838028,838367,838831	Gene ID= ENSG00000177697.17 TPM= 2.5 Transcript Type= nonsense_mediated_decay
chr11	834527	838835	834527	838835	+	ENST00000532045.5@CD151	ENST00000532045.5	protein_coding	834527,836063,836251,837250,837460,837942,838133	834591,836153,836843,837354,837618,838028,838835	Gene ID= ENSG00000177697.17 TPM= 19.04 Transcript Type= retained_intron
chr11	839721	842545	839721	842545	-	ENST00000322028.4@POLR2L	ENST00000322028.4	protein_coding	842414,839721	842545,840480	Gene ID= ENSG00000177700.5 TPM= 1.17 Transcript Type= protein_coding
chr11	842808	867111	842808	867111	+	ENST00000397397.6@TSPAN4	ENST00000397397.6	protein_coding	842808,847201,850288,862550,864437,865513,865694,865918,866562	842915,847300,850367,862741,864511,865614,865825,866001,867111	Gene ID= ENSG00000214063.10 TPM= 227.91 Transcript Type= protein_coding
chr11	842886	867111	842886	867111	+	transcript501.chr11.nnic@TSPAN4	transcript501.chr11.nnic	protein_coding	842886,847201,850288,862550,864437,865513,865694,865918,866562	843045,847300,850367,862741,864511,865614,865825,866001,867111	Gene ID= ENSG00000214063.10 TPM= 39.93 Transcript Type= NA
chr11	842808	867111	842808	867111	+	transcript513.chr11.nic@TSPAN4	transcript513.chr11.nic	protein_coding	842808,847201,850288,864437,865513,865694,865918,866562	842915,847300,850367,864511,865614,865825,866001,867111	Gene ID= ENSG00000214063.10 TPM= 19.36 Transcript Type= NA
chr11	842824	867116	842824	867116	+	ENST00000397396.5@TSPAN4	ENST00000397396.5	protein_coding	842824,847201,862550,864437,865513,865694,865918,866562	842915,847300,862741,864511,865614,865825,866001,867116	Gene ID= ENSG00000214063.10 TPM= 7.73 Transcript Type= protein_coding
chr11	842941	867116	842941	867116	+	ENST00000397408.5@TSPAN4	ENST00000397408.5	protein_coding	842941,847201,850288,862550,864437,865513,865694,865918,866562	843050,847300,850367,862741,864511,865614,865825,866001,867116	Gene ID= ENSG00000214063.10 TPM= 52.68 Transcript Type= protein_coding
chr11	844446	867116	844446	867116	+	ENST00000397404.5@TSPAN4	ENST00000397404.5	protein_coding	844446,847201,850288,862550,864437,865513,865694,865918,866562	844587,847300,850367,862741,864511,865614,865825,866001,867116	Gene ID= ENSG00000214063.10 TPM= 24.66 Transcript Type= protein_coding
chr11	844081	867116	844081	867116	+	ENST00000397406.5@TSPAN4	ENST00000397406.5	protein_coding	844081,847201,850288,862550,864437,865513,865694,865918,866562	844186,847300,850367,862741,864511,865614,865825,866001,867116	Gene ID= ENSG00000214063.10 TPM= 48.01 Transcript Type= protein_coding
chr11	857402	858973	857402	858973	-	transcript543.chr11.nnic@NA	transcript543.chr11.nnic	NA	857402	858973	Gene ID= novel_gene_chr11_544 TPM= 19.85 Transcript Type= NA
chr11	868396	911461	868396	911461	-	ENST00000323578.12@CHID1	ENST00000323578.12	protein_coding	910775,904706,902962,902198,900936,900004,899340,893427,884068,883148,870419,870121,868396	911461,904859,903111,902330,900980,900110,899401,893519,884169,883303,870499,870163,869956	Gene ID= ENSG00000177830.17 TPM= 5.84 Transcript Type= protein_coding
chr11	867860	915058	867860	915058	-	ENST00000449825.5@CHID1	ENST00000449825.5	protein_coding	914745,904706,902962,902198,900936,900004,899340,893427,884068,883148,870419,870121,867860	915058,904859,903111,902330,900980,900110,899401,893519,884169,883303,870499,870163,869956	Gene ID= ENSG00000177830.17 TPM= 1.17 Transcript Type= protein_coding
chr11	869767	910831	869767	910831	-	ENST00000436108.6@CHID1	ENST00000436108.6	protein_coding	910775,908542,904706,902962,902198,900936,900004,899340,893427,884068,883148,870419,870121,869767	910831,908645,904859,903111,902330,900980,900110,899401,893519,884169,883303,870499,870163,869956	Gene ID= ENSG00000177830.17 TPM= 37.95 Transcript Type= protein_coding
chr11	869762	910835	869762	910835	-	ENST00000429789.6@CHID1	ENST00000429789.6	protein_coding	910775,904706,902962,902198,900936,900004,899340,884068,883148,870419,870121,869762	910835,904859,903111,902330,900980,900110,899401,884169,883303,870499,870163,869956	Gene ID= ENSG00000177830.17 TPM= 4.09 Transcript Type= protein_coding
chr11	890997	893848	890997	893848	+	transcript560.chr11.nnic@NA	transcript560.chr11.nnic	NA	890997	893848	Gene ID= novel_gene_chr11_561 TPM= 4.67 Transcript Type= NA
chr11	925881	1012239	925881	1012239	+	ENST00000448903.6@AP2A2	ENST00000448903.6	protein_coding	925881,959437,970169,972062,977095,981198,984645,985435,986785,988552,992503,993284,993754,994072,1000432,1003722,1006528,1008012,1009100,1009328,1009683,1010548	926088,959505,970311,972255,977224,981299,984753,985582,986953,988689,992685,993381,993985,994245,1000598,1003804,1006617,1008135,1009216,1009397,1009817,1012239	Gene ID= ENSG00000183020.13 TPM= 18.68 Transcript Type= protein_coding
chr11	1223066	1262172	1223066	1262172	+	ENST00000529681.5@MUC5B	ENST00000529681.5	protein_coding	1223066,1225681,1226205,1226615,1227031,1227308,1227675,1228564,1229170,1229690,1230005,1230490,1230936,1231423,1231996,1232450,1232644,1233013,1233793,1234205,1234529,1235085,1235303,1236386,1236925,1238871,1239438,1239799,1240045,1240178,1240851,1252343,1252809,1254092,1254694,1255041,1255383,1256156,1256671,1257240,1257530,1258099,1258330,1258942,1259756,1259963,1260351,1260626,1261389	1223193,1225737,1226276,1226876,1227145,1227398,1227781,1228765,1229295,1229807,1230143,1230600,1231005,1231560,1232160,1232544,1232770,1233268,1233848,1234305,1234680,1235223,1235413,1236562,1237164,1239027,1239566,1239943,1240088,1240375,1251743,1252524,1252980,1254351,1254880,1255266,1255558,1256225,1256771,1257271,1257710,1258203,1258367,1259061,1259842,1260085,1260393,1260728,1262172	Gene ID= ENSG00000117983.17 TPM= 1.17 Transcript Type= protein_coding
chr11	1274371	1309622	1274371	1309622	-	ENST00000317204.10@TOLLIP	ENST00000317204.10	protein_coding	1309466,1295645,1290227,1288624,1286002,1274371	1309622,1295794,1290409,1288776,1286092,1277253	Gene ID= ENSG00000078902.15 TPM= 287.23 Transcript Type= protein_coding
chr11	1283843	1285786	1283843	1285786	+	transcript591.chr11.nnic@NA	transcript591.chr11.nnic	NA	1283843	1285786	Gene ID= novel_gene_chr11_592 TPM= 3.5 Transcript Type= NA
chr11	1309769	1310707	1309769	1310707	+	ENST00000530897.1@TOLLIP-AS1	ENST00000530897.1	antisense_RNA	1309769	1310707	Gene ID= ENSG00000255153.1 TPM= 1.17 Transcript Type= antisense_RNA
chr11	1469457	1480886	1469457	1480886	-	transcript596.chr11.nnic@MOB2	transcript596.chr11.nnic	protein_coding	1480771,1480393,1471295,1469457	1480886,1480486,1471419,1470488	Gene ID= ENSG00000182208.13 TPM= 10.51 Transcript Type= NA
chr11	1469457	1480886	1469457	1480886	-	transcript597.chr11.nic@MOB2	transcript597.chr11.nic	protein_coding	1480393,1471295,1469457	1480886,1471419,1470488	Gene ID= ENSG00000182208.13 TPM= 14.01 Transcript Type= NA
chr11	1525521	1527609	1525521	1527609	+	transcript598.chr11.nnic@NA	transcript598.chr11.nnic	NA	1525521	1527609	Gene ID= novel_gene_chr11_599 TPM= 2.34 Transcript Type= NA
chr11	1556155	1559565	1556155	1559565	-	transcript608.chr11.nic@DUSP8	transcript608.chr11.nic	protein_coding	1558889,1558112,1557794,1556155	1559565,1558271,1557917,1557574	Gene ID= ENSG00000184545.10 TPM= 4.67 Transcript Type= NA
chr11	1734821	1763954	1734821	1763954	-	ENST00000636615.1@AC068580.4	ENST00000636615.1	protein_coding	1763792,1761309,1759516,1758969,1757324,1754906,1753994,1753803,1747667,1734821	1763954,1761468,1759639,1759087,1757556,1755028,1754138,1753901,1748119,1735429	Gene ID= ENSG00000250644.3 TPM= 25.24 Transcript Type= protein_coding
chr11	1752752	1762510	1752752	1762510	-	transcript629.chr11.nic@CTSD	transcript629.chr11.nic	protein_coding	1762133,1761309,1759516,1758969,1757324,1754906,1753994,1753803,1752752	1762510,1761468,1759639,1759087,1757556,1755028,1754138,1753901,1753670	Gene ID= ENSG00000117984.13 TPM= 714.01 Transcript Type= NA
chr11	1753313	1763948	1753313	1763948	-	ENST00000636843.1@CTSD	ENST00000636843.1	protein_coding	1763792,1761309,1759516,1758969,1757324,1754906,1753994,1753803,1753313	1763948,1761468,1759633,1759087,1757556,1755028,1754138,1753901,1753670	Gene ID= ENSG00000117984.13 TPM= 28.71 Transcript Type= protein_coding
chr11	1834375	1837521	1834375	1837521	+	transcript652.chr11.nic@SYT8	transcript652.chr11.nic	protein_coding	1834375,1835094,1835296,1835886,1836425,1836756,1836957,1837192	1834617,1835199,1835459,1836284,1836592,1836861,1837090,1837521	Gene ID= ENSG00000149043.16 TPM= 7.82 Transcript Type= NA
chr11	1834428	1837521	1834428	1837521	+	transcript655.chr11.nic@SYT8	transcript655.chr11.nic	protein_coding	1834428,1835094,1835296,1835886,1836756,1836957,1837192	1834617,1835199,1835459,1836592,1836861,1837090,1837521	Gene ID= ENSG00000149043.16 TPM= 8.41 Transcript Type= NA
chr11	1834476	1837521	1834476	1837521	+	ENST00000464897.5@SYT8	ENST00000464897.5	protein_coding	1834476,1835094,1835296,1835886,1836756,1836957,1837192	1834601,1835199,1835459,1836592,1836861,1837090,1837521	Gene ID= ENSG00000149043.16 TPM= 14.24 Transcript Type= retained_intron
chr11	1834444	1837521	1834444	1837521	+	ENST00000381968.7@SYT8	ENST00000381968.7	protein_coding	1834444,1835094,1835296,1835886,1836126,1836425,1836756,1836957,1837192	1834601,1835199,1835459,1835984,1836284,1836592,1836861,1837090,1837521	Gene ID= ENSG00000149043.16 TPM= 4.32 Transcript Type= protein_coding
chr11	1852970	1892263	1852970	1892263	+	ENST00000311604.7@LSP1	ENST00000311604.7	protein_coding	1852970,1880087,1881432,1883419,1883932,1884280,1884500,1886732,1887237,1887474,1891773	1853197,1880224,1881596,1883560,1884024,1884323,1884581,1886866,1887314,1887576,1892263	Gene ID= ENSG00000130592.15 TPM= 108.59 Transcript Type= protein_coding
chr11	1947278	1956609	1947278	1956609	+	ENST00000397298.7@MRPL23	ENST00000397298.7	protein_coding	1947278,1950899,1952127,1952782,1956256	1947379,1951021,1952209,1952855,1956609	Gene ID= ENSG00000214026.10 TPM= 53.71 Transcript Type= protein_coding
chr11	1995163	1997875	1995163	1997875	-	ENST00000414790.5@H19	ENST00000414790.5	processed_transcript	1996518,1996287,1996079,1995876,1995163	1997875,1996421,1996191,1995998,1995794	Gene ID= ENSG00000130600.17 TPM= 19.85 Transcript Type= lincRNA
chr11	2295645	2302060	2295645	2302060	-	ENST00000381153.7@C11orf21	ENST00000381153.7	protein_coding	2301756,2300520,2299428,2295645	2302060,2300613,2299707,2297921	Gene ID= ENSG00000110665.11 TPM= 2.34 Transcript Type= protein_coding
chr11	2302013	2318142	2302013	2318142	+	ENST00000182290.8@TSPAN32	ENST00000182290.8	protein_coding	2302013,2302844,2304107,2308736,2313654,2314485,2316229,2316576,2317344,2317863	2302215,2302958,2304204,2308810,2313755,2314571,2316312,2316667,2317525,2318142	Gene ID= ENSG00000064201.15 TPM= 2.34 Transcript Type= protein_coding
chr11	2302150	2318142	2302150	2318142	+	ENST00000381121.7@TSPAN32	ENST00000381121.7	protein_coding	2302150,2302844,2304107,2308736,2313654,2314485,2316229,2316576,2317863	2302215,2302958,2304204,2308810,2313755,2314571,2316312,2316667,2318142	Gene ID= ENSG00000064201.15 TPM= 2.34 Transcript Type= protein_coding
chr11	2316886	2318140	2316886	2318140	+	transcript693.chr11.nnic@NA	transcript693.chr11.nnic	NA	2316886	2318140	Gene ID= novel_gene_chr11_694 TPM= 5.84 Transcript Type= NA
chr11	2324757	2328210	2324757	2328210	-	transcript695.chr11.nnic@NA	transcript695.chr11.nnic	NA	2324757	2328210	Gene ID= novel_gene_chr11_696 TPM= 2.34 Transcript Type= NA
chr11	2335374	2342499	2335374	2342499	+	transcript698.chr11.nnic@NA	transcript698.chr11.nnic	NA	2335374,2336131,2341919	2335726,2336509,2342499	Gene ID= novel_gene_chr11_699 TPM= 4.67 Transcript Type= NA
chr11	2377294	2397419	2377294	2397419	+	ENST00000263645.9@CD81	ENST00000263645.9	protein_coding	2377294,2390412,2394095,2394972,2395416,2395869,2396628,2396804	2377615,2390526,2394192,2395046,2395520,2395970,2396714,2397419	Gene ID= ENSG00000110651.11 TPM= 840.08 Transcript Type= protein_coding
chr11	2400488	2403878	2400488	2403878	+	ENST00000380996.9@TSSC4	ENST00000380996.9	protein_coding	2400488,2402294,2402611,2402845	2400798,2402450,2402652,2403878	Gene ID= ENSG00000184281.14 TPM= 5.84 Transcript Type= protein_coding
chr11	2400536	2403876	2400536	2403876	+	ENST00000333256.10@TSSC4	ENST00000333256.10	protein_coding	2400536,2402294,2402611	2400798,2402450,2403876	Gene ID= ENSG00000184281.14 TPM= 61.88 Transcript Type= protein_coding
chr11	2402293	2403875	2402293	2403875	+	ENST00000451491.2@TSSC4	ENST00000451491.2	protein_coding	2402293,2402611	2402450,2403875	Gene ID= ENSG00000184281.14 TPM= 8.17 Transcript Type= protein_coding
chr11	2444975	2848991	2444975	2848991	+	transcript728.chr11.nnic@KCNQ1	transcript728.chr11.nnic	protein_coding	2444975,2527928,2570628,2571325,2572013,2572846,2583435,2585212,2587570,2588713,2661961,2768844,2775960,2777976,2847767	2445484,2528018,2570754,2571403,2572109,2572986,2583545,2585307,2587692,2588854,2662081,2768919,2776054,2778037,2848991	Gene ID= ENSG00000053918.15 TPM= 5.06 Transcript Type= NA
chr11	2444879	2848991	2444879	2848991	+	transcript729.chr11.nnic@KCNQ1	transcript729.chr11.nnic	protein_coding	2444879,2527928,2570628,2571325,2572013,2572846,2583435,2587570,2588713,2661961,2768844,2775960,2776986,2777976,2847767	2445484,2528018,2570754,2571403,2572109,2572986,2583545,2587692,2588854,2662081,2768919,2776054,2777032,2778037,2848991	Gene ID= ENSG00000053918.15 TPM= 7.59 Transcript Type= NA
chr11	2444991	2849109	2444991	2849109	+	ENST00000155840.9@KCNQ1	ENST00000155840.9	protein_coding	2444991,2527928,2570628,2571325,2572013,2572846,2583435,2585212,2587570,2588713,2661961,2768844,2775960,2776986,2777976,2847767	2445484,2528018,2570754,2571403,2572109,2572986,2583545,2585307,2587692,2588854,2662081,2768919,2776054,2777032,2778037,2849109	Gene ID= ENSG00000053918.15 TPM= 7.39 Transcript Type= protein_coding
chr11	2683962	2689023	2683962	2689023	-	transcript736.chr11.nnic@NA	transcript736.chr11.nnic	NA	2683962	2689023	Gene ID= novel_gene_chr11_737 TPM= 5.84 Transcript Type= NA
chr11	2883218	2885813	2883218	2885813	-	ENST00000440480.6@CDKN1C	ENST00000440480.6	protein_coding	2885634,2884670,2883999,2883218	2885813,2885466,2884134,2883915	Gene ID= ENSG00000129757.12 TPM= 10.12 Transcript Type= protein_coding
chr11	2883213	2885881	2883213	2885881	-	ENST00000414822.7@CDKN1C	ENST00000414822.7	protein_coding	2884670,2883999,2883213	2885881,2884134,2883915	Gene ID= ENSG00000129757.12 TPM= 6.04 Transcript Type= protein_coding
chr11	2883213	2885749	2883213	2885749	-	ENST00000380725.1@CDKN1C	ENST00000380725.1	protein_coding	2885634,2885202,2883999,2883213	2885749,2885466,2884134,2883915	Gene ID= ENSG00000129757.12 TPM= 3.7 Transcript Type= protein_coding
chr11	2883579	2885771	2883579	2885771	-	ENST00000430149.2@CDKN1C	ENST00000430149.2	protein_coding	2884670,2883999,2883579	2885771,2884134,2883910	Gene ID= ENSG00000129757.12 TPM= 5.84 Transcript Type= protein_coding
chr11	2902265	2925240	2902265	2925240	+	transcript750.chr11.nnic@SLC22A18	transcript750.chr11.nnic	protein_coding	2902265,2903214,2908233,2909196,2909578,2916622,2917988,2919307,2919738,2922102,2922436,2925010	2902364,2903489,2908330,2909356,2909710,2916740,2918095,2919407,2919848,2922203,2922556,2925240	Gene ID= ENSG00000110628.13 TPM= 2.34 Transcript Type= NA
chr11	2902193	2925246	2902193	2925246	+	ENST00000312221.9@SLC22A18	ENST00000312221.9	protein_coding	2902193,2903214,2908233,2909196,2909578,2916622,2917988,2919307,2922102,2922436,2925010	2902364,2903489,2908330,2909356,2909710,2916740,2918095,2919407,2922203,2922556,2925246	Gene ID= ENSG00000110628.13 TPM= 36.2 Transcript Type= protein_coding
chr11	2902265	2921081	2902265	2921081	+	transcript756.chr11.nnic@SLC22A18	transcript756.chr11.nnic	protein_coding	2902265,2903214,2908233,2909196,2909578,2916622,2917988,2919307,2919738	2902364,2903489,2908330,2909356,2909710,2916740,2918095,2919407,2921081	Gene ID= ENSG00000110628.13 TPM= 2.34 Transcript Type= NA
chr11	2920946	2925240	2920946	2925240	+	transcript764.chr11.nnic@SLC22A18	transcript764.chr11.nnic	protein_coding	2920946,2921540,2922436,2925010	2921414,2922203,2922556,2925240	Gene ID= ENSG00000110628.13 TPM= 4.67 Transcript Type= NA
chr11	2899721	2925246	2899721	2925246	+	ENST00000347936.6@SLC22A18	ENST00000347936.6	protein_coding	2899721,2903214,2908233,2909196,2909578,2916622,2917988,2919307,2922102,2922436,2925010	2899806,2903489,2908330,2909356,2909710,2916740,2918095,2919407,2922203,2922556,2925246	Gene ID= ENSG00000110628.13 TPM= 2.34 Transcript Type= protein_coding
chr11	2921968	2925240	2921968	2925240	+	ENST00000495518.1@SLC22A18	ENST00000495518.1	protein_coding	2921968,2922436,2925010	2922203,2922556,2925240	Gene ID= ENSG00000110628.13 TPM= 3.5 Transcript Type= retained_intron
chr11	2928273	2929455	2928273	2929455	-	ENST00000314222.4@PHLDA2	ENST00000314222.4	protein_coding	2928896,2928273	2929455,2928667	Gene ID= ENSG00000181649.5 TPM= 18.68 Transcript Type= protein_coding
chr11	2944431	2992339	2944431	2992339	-	transcript783.chr11.nnic@NAP1L4	transcript783.chr11.nnic	protein_coding	2992254,2989129,2979207,2978284,2976024,2972102,2971448,2969803,2964680,2959770,2958399,2955744,2954527,2951780,2951259,2944431	2992339,2989197,2979237,2978342,2976123,2972243,2971534,2969934,2964751,2959909,2958544,2955766,2954646,2951809,2951315,2945646	Gene ID= ENSG00000205531.12 TPM= 13.85 Transcript Type= NA
chr11	2944437	2992219	2944437	2992219	-	transcript787.chr11.nic@NAP1L4	transcript787.chr11.nic	protein_coding	2991794,2979207,2978284,2976024,2972102,2971448,2969803,2964680,2959770,2958399,2955744,2954527,2951780,2951259,2949227,2944437	2992219,2979237,2978342,2976123,2972243,2971534,2969934,2964751,2959909,2958544,2955766,2954646,2951809,2951315,2949264,2945646	Gene ID= ENSG00000205531.12 TPM= 19.92 Transcript Type= NA
chr11	2944437	2992377	2944437	2992377	-	ENST00000380542.8@NAP1L4	ENST00000380542.8	protein_coding	2992254,2979207,2978284,2976024,2972102,2971448,2969803,2964680,2959770,2958399,2955744,2954527,2951780,2951259,2949227,2944437	2992377,2979237,2978342,2976123,2972243,2971534,2969934,2964751,2959909,2958544,2955766,2954646,2951809,2951315,2949264,2945646	Gene ID= ENSG00000205531.12 TPM= 50.28 Transcript Type= protein_coding
chr11	2944431	2992115	2944431	2992115	-	transcript793.chr11.nic@NAP1L4	transcript793.chr11.nic	protein_coding	2991794,2979207,2978284,2976024,2972102,2971448,2969803,2964680,2959770,2958399,2955744,2954527,2951780,2951259,2944431	2992115,2979237,2978342,2976123,2972243,2971534,2969934,2964751,2959909,2958544,2955766,2954646,2951809,2951315,2945646	Gene ID= ENSG00000205531.12 TPM= 25.52 Transcript Type= NA
chr11	2944431	2992377	2944431	2992377	-	ENST00000620138.4@NAP1L4	ENST00000620138.4	protein_coding	2992254,2979207,2978284,2976024,2972102,2971448,2969803,2964680,2959770,2958399,2955744,2954527,2951780,2951259,2944431	2992377,2979237,2978342,2976123,2972243,2971534,2969934,2964751,2959909,2958544,2955766,2954646,2951809,2951315,2945646	Gene ID= ENSG00000205531.12 TPM= 75.73 Transcript Type= protein_coding
chr11	2944436	2947210	2944436	2947210	-	transcript806.chr11.nnic@NA	transcript806.chr11.nnic	NA	2944436	2947210	Gene ID= novel_gene_chr11_807 TPM= 7.43 Transcript Type= NA
chr11	3000929	3057459	3000929	3057459	-	transcript808.chr11.nic@CARS	transcript808.chr11.nic	protein_coding	3057343,3047753,3042165,3040896,3039835,3039194,3038050,3029303,3028996,3026676,3020220,3019139,3018620,3018408,3017857,3017106,3015781,3012195,3006879,3005366,3002541,3001962,3000929	3057459,3048001,3042256,3040984,3039931,3039292,3038199,3029443,3029084,3026797,3020332,3019267,3018749,3018511,3017954,3017295,3015849,3012276,3006959,3005433,3002600,3002053,3001248	Gene ID= ENSG00000110619.17 TPM= 3.89 Transcript Type= NA
chr11	3000929	3057457	3000929	3057457	-	transcript812.chr11.nic@CARS	transcript812.chr11.nic	protein_coding	3057343,3042165,3040896,3039835,3039194,3038050,3029303,3028996,3026676,3020220,3019139,3018620,3018408,3017857,3017106,3015781,3012195,3006879,3005366,3002541,3001962,3000929	3057457,3042256,3041031,3039931,3039292,3038199,3029443,3029084,3026797,3020332,3019267,3018749,3018511,3017954,3017295,3015849,3012276,3006959,3005433,3002600,3002053,3001248	Gene ID= ENSG00000110619.17 TPM= 5.06 Transcript Type= NA
chr11	3000922	3057613	3000922	3057613	-	ENST00000397111.9@CARS	ENST00000397111.9	protein_coding	3057343,3042165,3040896,3039835,3039194,3038050,3029303,3028996,3026676,3020220,3019139,3018620,3018408,3017857,3017106,3015781,3012195,3006879,3005366,3002541,3001970,3000922	3057613,3042256,3040984,3039931,3039292,3038199,3029443,3029084,3026797,3020332,3019267,3018749,3018511,3017954,3017295,3015849,3012276,3006959,3005433,3002600,3002053,3001248	Gene ID= ENSG00000110619.17 TPM= 29.77 Transcript Type= protein_coding
chr11	3000929	3057418	3000929	3057418	-	ENST00000278224.13@CARS	ENST00000278224.13	protein_coding	3057343,3042165,3040896,3039835,3039194,3038050,3029303,3028996,3026676,3020220,3019139,3018620,3018408,3017857,3017106,3015781,3012195,3006879,3005366,3002541,3001962,3000929	3057418,3042256,3040984,3039931,3039292,3038199,3029443,3029084,3026797,3020332,3019267,3018749,3018511,3017954,3017295,3015849,3012276,3006959,3005433,3002600,3002053,3001248	Gene ID= ENSG00000110619.17 TPM= 9.73 Transcript Type= protein_coding
chr11	3000922	3057437	3000922	3057437	-	ENST00000380525.8@CARS	ENST00000380525.8	protein_coding	3057343,3047753,3042165,3040896,3039835,3039194,3038050,3029303,3028996,3026676,3020220,3019139,3018620,3018408,3017857,3017106,3015781,3012195,3006879,3005366,3002541,3001970,3000922	3057437,3048001,3042256,3040984,3039931,3039292,3038199,3029443,3029084,3026797,3020332,3019267,3018749,3018511,3017954,3017295,3015849,3012276,3006959,3005433,3002600,3002053,3001248	Gene ID= ENSG00000110619.17 TPM= 19.27 Transcript Type= protein_coding
chr11	3087116	3165354	3087116	3165354	-	ENST00000263650.11@OSBPL5	ENST00000263650.11	protein_coding	3165216,3129013,3126473,3122348,3121997,3120421,3119547,3107771,3107263,3104193,3103239,3102183,3101603,3100158,3094237,3093746,3093527,3092867,3092432,3090558,3089846,3087116	3165354,3129169,3126555,3122428,3122098,3120624,3119631,3107945,3107455,3104377,3103320,3102281,3101699,3100256,3094334,3093835,3093663,3093052,3092558,3090696,3089948,3088343	Gene ID= ENSG00000021762.19 TPM= 33.47 Transcript Type= protein_coding
chr11	3087121	3165338	3087121	3165338	-	transcript831.chr11.nic@OSBPL5	transcript831.chr11.nic	protein_coding	3165216,3129013,3126473,3122348,3121997,3120421,3119547,3107771,3107263,3104193,3103239,3102183,3101603,3100158,3094237,3093746,3092867,3092432,3090558,3089846,3087121	3165338,3129169,3126555,3122428,3122098,3120624,3119631,3107945,3107455,3104377,3103320,3102281,3101699,3100256,3094334,3093835,3093663,3092558,3090696,3089948,3088343	Gene ID= ENSG00000021762.19 TPM= 7.79 Transcript Type= NA
chr11	3357928	3379222	3357928	3379222	-	ENST00000343338.11@ZNF195	ENST00000343338.11	protein_coding	3379038,3373577,3371577,3370975,3357928	3379222,3373675,3371703,3371070,3360565	Gene ID= ENSG00000005801.16 TPM= 1.17 Transcript Type= protein_coding
chr11	3359117	3379146	3359117	3379146	-	ENST00000526601.5@ZNF195	ENST00000526601.5	protein_coding	3379038,3373577,3371577,3370975,3361743,3359117	3379146,3373656,3371703,3371070,3361889,3360565	Gene ID= ENSG00000005801.16 TPM= 2.34 Transcript Type= protein_coding
chr11	3362483	3366280	3362483	3366280	+	transcript857.chr11.nnic@NA	transcript857.chr11.nnic	NA	3362483	3366280	Gene ID= novel_gene_chr11_858 TPM= 8.17 Transcript Type= NA
chr11	3475901	3477067	3475901	3477067	-	transcript864.chr11.nnic@NA	transcript864.chr11.nnic	NA	3475901	3477067	Gene ID= novel_gene_chr11_865 TPM= 5.84 Transcript Type= NA
chr11	3675010	3797792	3675010	3797792	-	ENST00000324932.11@NUP98	ENST00000324932.11	protein_coding	3797400,3782042,3779156,3778873,3775882,3773632,3771748,3768581,3762902,3760539,3753316,3744509,3735191,3731391,3725103,3723157,3720712,3719412,3713818,3712564,3706445,3705200,3702463,3700610,3699082,3695449,3693232,3691347,3685973,3683200,3679554,3676509,3675010	3797792,3782145,3779257,3779049,3776021,3773739,3771928,3768744,3763039,3760626,3753408,3744649,3735324,3731578,3725219,3723455,3720825,3719550,3713995,3712728,3706627,3705356,3702892,3700839,3699348,3695606,3693375,3691489,3686194,3683441,3679708,3676620,3676376	Gene ID= ENSG00000110713.15 TPM= 12.84 Transcript Type= protein_coding
chr11	3711553	3797541	3711553	3797541	-	ENST00000397004.8@NUP98	ENST00000397004.8	protein_coding	3797400,3782042,3779156,3778873,3775882,3773632,3771748,3768581,3762902,3760539,3753316,3744509,3735191,3731391,3725103,3723157,3720712,3719412,3713818,3711553	3797541,3782145,3779257,3779049,3776021,3773739,3771928,3768744,3763039,3760626,3753408,3744649,3735324,3731578,3725219,3723455,3720825,3719550,3713995,3712728	Gene ID= ENSG00000110713.15 TPM= 2.34 Transcript Type= protein_coding
chr11	3711835	3797547	3711835	3797547	-	ENST00000397007.8@NUP98	ENST00000397007.8	protein_coding	3797400,3782042,3779156,3778873,3775882,3773632,3771748,3768581,3762902,3760488,3753316,3744509,3735191,3731391,3725103,3723157,3720712,3719412,3713818,3711835	3797547,3782145,3779257,3779049,3776021,3773739,3771928,3768744,3763039,3760626,3753408,3744649,3735324,3731578,3725219,3723455,3720825,3719550,3713995,3712728	Gene ID= ENSG00000110713.15 TPM= 5.84 Transcript Type= protein_coding
chr11	3722676	3724790	3722676	3724790	+	transcript883.chr11.nnic@NA	transcript883.chr11.nnic	NA	3722676	3724790	Gene ID= novel_gene_chr11_884 TPM= 2.34 Transcript Type= NA
chr11	3797819	3826352	3797819	3826352	+	ENST00000300730.10@PGAP2	ENST00000300730.10	protein_coding	3797819,3808294,3811250,3823883,3824270,3825020,3825328	3797982,3808315,3811424,3824135,3824364,3825128,3826352	Gene ID= ENSG00000148985.19 TPM= 5.25 Transcript Type= protein_coding
chr11	3797901	3826352	3797901	3826352	+	transcript897.chr11.nic@PGAP2	transcript897.chr11.nic	protein_coding	3797901,3808294,3811250,3823883,3825328	3797982,3808315,3811424,3825128,3826352	Gene ID= ENSG00000148985.19 TPM= 2.34 Transcript Type= NA
chr11	3808545	3826352	3808545	3826352	+	transcript898.chr11.nic@PGAP2	transcript898.chr11.nic	protein_coding	3808545,3823883,3824270,3825020,3825328	3808651,3824135,3824364,3825128,3826352	Gene ID= ENSG00000148985.19 TPM= 6.42 Transcript Type= NA
chr11	3797902	3826321	3797902	3826321	+	ENST00000396993.8@PGAP2	ENST00000396993.8	protein_coding	3797902,3808294,3823883,3824270,3825020,3825328	3797982,3808315,3824135,3824376,3825128,3826321	Gene ID= ENSG00000148985.19 TPM= 1.17 Transcript Type= protein_coding
chr11	3808594	3826330	3808594	3826330	+	ENST00000496834.6@PGAP2	ENST00000496834.6	protein_coding	3808594,3823883,3824270,3825020,3825328	3808651,3824135,3824376,3825128,3826330	Gene ID= ENSG00000148985.19 TPM= 4.67 Transcript Type= protein_coding
chr11	3826978	3840983	3826978	3840983	-	ENST00000351018.4@RHOG	ENST00000351018.4	protein_coding	3840894,3826978	3840983,3828206	Gene ID= ENSG00000177105.9 TPM= 135.44 Transcript Type= protein_coding
chr11	3855131	4093209	3855131	4093209	+	transcript905.chr11.nnic@STIM1	transcript905.chr11.nnic	protein_coding	3855131,3855645,3967552,4023873,4055526,4059281,4070026,4074502,4082184,4082882,4083263,4084673,4086477,4091282	3855448,3856409,3967682,4023987,4055637,4059396,4070203,4074679,4082351,4082982,4083498,4084765,4086543,4093209	Gene ID= ENSG00000167323.11 TPM= 18.45 Transcript Type= NA
chr11	3855131	4093209	3855131	4093209	+	transcript906.chr11.nnic@STIM1	transcript906.chr11.nnic	protein_coding	3855131,3855645,3967552,4023873,4055526,4059281,4070026,4074502,4082184,4082882,4083263,4086477,4091282	3855448,3856409,3967682,4023987,4055637,4059396,4070203,4074679,4082351,4082982,4083498,4086543,4093209	Gene ID= ENSG00000167323.11 TPM= 12.61 Transcript Type= NA
chr11	3855702	4093209	3855702	4093209	+	ENST00000300737.8@STIM1	ENST00000300737.8	protein_coding	3855702,3967552,4023873,4055526,4059281,4070026,4074502,4082184,4082882,4083263,4086477,4091282	3856409,3967682,4023987,4055637,4059396,4070203,4074679,4082351,4082982,4083498,4086543,4093209	Gene ID= ENSG00000167323.11 TPM= 93.17 Transcript Type= protein_coding
chr11	4094809	4138876	4094809	4138876	+	ENST00000300738.9@RRM1	ENST00000300738.9	protein_coding	4094809,4101993,4106046,4107435,4109644,4111601,4111900,4118320,4119845,4121604,4122141,4123183,4126684,4127035,4129074,4132286,4133563,4135082,4138195	4095031,4102081,4106223,4107535,4109703,4111640,4112062,4118461,4119928,4121765,4122220,4123384,4126833,4127256,4129150,4132421,4133658,4135270,4138876	Gene ID= ENSG00000167325.14 TPM= 35.03 Transcript Type= protein_coding
chr11	4384902	4393696	4384902	4393696	-	ENST00000254436.7@TRIM21	ENST00000254436.7	protein_coding	4393633,4390002,4389654,4388300,4386968,4386157,4384902	4393696,4390458,4389749,4388530,4386990,4386257,4385853	Gene ID= ENSG00000132109.9 TPM= 53.71 Transcript Type= protein_coding
chr11	4598672	4608259	4598672	4608259	-	ENST00000300747.9@TRIM68	ENST00000300747.9	protein_coding	4608027,4605079,4603245,4602152,4601664,4601027,4598672	4608259,4605561,4603340,4602412,4601686,4601127,4600826	Gene ID= ENSG00000167333.12 TPM= 37.36 Transcript Type= protein_coding
chr11	5225464	5227071	5225464	5227071	-	ENST00000335295.4@HBB	ENST00000335295.4	protein_coding	5226930,5226577,5225464	5227071,5226799,5225726	Gene ID= ENSG00000244734.3 TPM= 51.37 Transcript Type= protein_coding
chr11	5596656	5612952	5596656	5612952	+	ENST00000380097.7@TRIM6	ENST00000380097.7	protein_coding	5596656,5603246,5604534,5605337,5608372,5610145,5610535,5610777	5596914,5603735,5604629,5605567,5608394,5610245,5610561,5612952	Gene ID= ENSG00000121236.20 TPM= 2.34 Transcript Type= protein_coding
chr11	5624983	5644398	5624983	5644398	+	ENST00000429814.2@TRIM34	ENST00000429814.2	protein_coding	5624983,5632255,5633804,5634631,5641167,5642406,5642817,5643144	5625060,5632754,5633899,5634861,5641189,5642506,5642843,5644398	Gene ID= ENSG00000258659.6 TPM= 30.36 Transcript Type= protein_coding
chr11	5663557	5685109	5663557	5685109	-	transcript950.chr11.nic@TRIM5	transcript950.chr11.nic	protein_coding	5685016,5679761,5679074,5678204,5667689,5665981,5665656,5663557	5685109,5680238,5679169,5678434,5667711,5666081,5665682,5665395	Gene ID= ENSG00000132256.18 TPM= 9.92 Transcript Type= NA
chr11	5663563	5872358	5663563	5872358	-	ENST00000380027.5@TRIM5	ENST00000380027.5	protein_coding	5872315,5861165,5855752,5685016,5679761,5679074,5678204,5667689,5665981,5665656,5663563	5872358,5861361,5855854,5685394,5680238,5679169,5678434,5667711,5666081,5665682,5664173	Gene ID= ENSG00000132256.18 TPM= 1.17 Transcript Type= protein_coding
chr11	5663557	5685063	5663557	5685063	-	ENST00000380034.7@TRIM5	ENST00000380034.7	protein_coding	5684868,5679761,5679074,5678204,5667689,5665981,5665656,5663557	5685063,5680238,5679169,5678434,5667711,5666081,5665682,5665395	Gene ID= ENSG00000132256.18 TPM= 29.77 Transcript Type= protein_coding
chr11	5672212	5674685	5672212	5674685	-	transcript976.chr11.nnic@NA	transcript976.chr11.nnic	NA	5672212	5674685	Gene ID= novel_gene_chr11_977 TPM= 2.34 Transcript Type= NA
chr11	5689628	5710863	5689628	5710863	+	transcript958.chr11.nic@TRIM22	transcript958.chr11.nic	protein_coding	5689628,5696167,5697248,5706594,5708173,5708577,5709053	5689899,5696655,5698545,5706616,5708273,5708603,5710863	Gene ID= ENSG00000132274.15 TPM= 14.98 Transcript Type= NA
chr11	5689689	5710863	5689689	5710863	+	ENST00000379965.7@TRIM22	ENST00000379965.7	protein_coding	5689689,5696167,5697248,5698315,5706594,5708173,5708577,5709053	5689899,5696655,5697343,5698545,5706616,5708273,5708603,5710863	Gene ID= ENSG00000132274.15 TPM= 80.56 Transcript Type= protein_coding
chr11	5689796	5692807	5689796	5692807	+	transcript972.chr11.nnic@NA	transcript972.chr11.nnic	NA	5689796	5692807	Gene ID= novel_gene_chr11_973 TPM= 2.34 Transcript Type= NA
chr11	5700586	5703542	5700586	5703542	-	transcript974.chr11.nnic@NA	transcript974.chr11.nnic	NA	5700586	5703542	Gene ID= novel_gene_chr11_975 TPM= 29.19 Transcript Type= NA
chr11	6211345	6234711	6211345	6234711	-	ENST00000265978.8@FAM160A2	ENST00000265978.8	protein_coding	6234544,6224379,6223610,6223080,6222811,6222442,6218971,6218558,6217371,6214733,6214411,6211345	6234711,6224707,6224248,6223238,6222897,6222609,6219050,6218763,6218150,6214911,6214573,6211867	Gene ID= ENSG00000051009.10 TPM= 8.27 Transcript Type= protein_coding
chr11	6211345	6234682	6211345	6234682	-	transcript986.chr11.nic@FAM160A2	transcript986.chr11.nic	protein_coding	6234544,6224379,6223610,6223080,6222811,6222442,6218971,6218558,6214733,6214411,6211345	6234682,6224707,6224248,6223238,6222897,6222609,6219050,6218763,6218150,6214573,6211867	Gene ID= ENSG00000051009.10 TPM= 7.1 Transcript Type= NA
chr11	6211345	6234682	6211345	6234682	-	transcript987.chr11.nic@FAM160A2	transcript987.chr11.nic	protein_coding	6234544,6224379,6223610,6223080,6222811,6222442,6218971,6218600,6214733,6214411,6211345	6234682,6224707,6224248,6223238,6222897,6222609,6219050,6218763,6218150,6214573,6211867	Gene ID= ENSG00000051009.10 TPM= 8.66 Transcript Type= NA
chr11	6211335	6234616	6211335	6234616	-	ENST00000449352.6@FAM160A2	ENST00000449352.6	protein_coding	6234544,6224379,6223610,6223080,6222811,6222442,6218971,6218600,6217371,6214733,6214411,6211335	6234616,6224707,6224248,6223238,6222897,6222609,6219050,6218763,6218150,6214911,6214573,6211867	Gene ID= ENSG00000051009.10 TPM= 24.61 Transcript Type= protein_coding
chr11	6216570	6234663	6216570	6234663	-	ENST00000524416.1@FAM160A2	ENST00000524416.1	protein_coding	6234544,6224379,6223610,6223080,6222811,6222442,6218971,6218600,6216570	6234663,6224707,6224248,6223238,6222897,6222609,6219050,6218763,6218150	Gene ID= ENSG00000051009.10 TPM= 1.55 Transcript Type= protein_coding
chr11	6318946	6320515	6318946	6320515	-	transcript996.chr11.nnic@NA	transcript996.chr11.nnic	NA	6318946	6320515	Gene ID= novel_gene_chr11_997 TPM= 3.5 Transcript Type= NA
chr11	6318946	6320062	6318946	6320062	-	ENST00000532354.1@CAVIN3	ENST00000532354.1	protein_coding	6319657,6318946	6320062,6319564	Gene ID= ENSG00000170955.9 TPM= 1.75 Transcript Type= retained_intron
chr11	6318946	6320534	6318946	6320534	-	transcript995.chr11.nnic@CAVIN3	transcript995.chr11.nnic	protein_coding	6320093,6318946	6320534,6319629	Gene ID= ENSG00000170955.9 TPM= 2.92 Transcript Type= NA
chr11	6390431	6394995	6390431	6394995	+	ENST00000342245.8@SMPD1	ENST00000342245.8	protein_coding	6390431,6391384,6393216,6393617,6393896,6394198	6390916,6392156,6393387,6393693,6394041,6394995	Gene ID= ENSG00000166311.9 TPM= 40.08 Transcript Type= protein_coding
chr11	6390473	6394991	6390473	6394991	+	ENST00000534405.5@SMPD1	ENST00000534405.5	protein_coding	6390473,6391384,6393216,6393617,6393896,6394198	6390916,6392196,6393387,6393693,6394041,6394991	Gene ID= ENSG00000166311.9 TPM= 9.14 Transcript Type= nonsense_mediated_decay
chr11	6390503	6394998	6390503	6394998	+	ENST00000533123.5@SMPD1	ENST00000533123.5	protein_coding	6390503,6391384,6393617,6393896,6394198	6390916,6392156,6393693,6394041,6394998	Gene ID= ENSG00000166311.9 TPM= 6.81 Transcript Type= nonsense_mediated_decay
chr11	6395125	6419114	6395125	6419114	-	transcript1003.chr11.nnic@APBB1	transcript1003.chr11.nnic	protein_coding	6418985,6410627,6403647,6403488,6403319,6403145,6402576,6402082,6401574,6401345,6400989,6396100,6395786,6395125	6419114,6411361,6403837,6403544,6403404,6403208,6402725,6402209,6401688,6401429,6401072,6396215,6395962,6395701	Gene ID= ENSG00000166313.18 TPM= 9.34 Transcript Type= NA
chr11	6395125	6419070	6395125	6419070	-	ENST00000299402.10@APBB1	ENST00000299402.10	protein_coding	6418985,6410627,6403647,6403488,6403319,6403145,6402576,6402082,6401574,6401345,6400989,6396100,6395786,6395125	6419070,6411361,6403822,6403544,6403404,6403208,6402725,6402209,6401688,6401429,6401072,6396215,6395962,6395701	Gene ID= ENSG00000166313.18 TPM= 95.16 Transcript Type= protein_coding
chr11	6395125	6419414	6395125	6419414	-	ENST00000311051.7@APBB1	ENST00000311051.7	protein_coding	6419346,6410627,6403647,6403488,6403319,6403145,6402576,6402082,6401574,6401345,6400989,6396100,6395786,6395125	6419414,6411361,6403822,6403544,6403404,6403208,6402725,6402209,6401688,6401429,6401072,6396215,6395962,6395701	Gene ID= ENSG00000166313.18 TPM= 8.76 Transcript Type= protein_coding
chr11	6448617	6473984	6448617	6473984	-	ENST00000359518.7@TRIM3	ENST00000359518.7	protein_coding	6473791,6473084,6465565,6458065,6457696,6457296,6456297,6456072,6451271,6450892,6450551,6449306,6448617	6473984,6473248,6465732,6458296,6457847,6457476,6457029,6456175,6451438,6451060,6450621,6449446,6449180	Gene ID= ENSG00000110171.19 TPM= 7.59 Transcript Type= protein_coding
chr11	6448615	6473984	6448615	6473984	-	ENST00000345851.7@TRIM3	ENST00000345851.7	protein_coding	6473791,6465565,6458065,6457696,6457296,6456297,6456072,6451271,6450892,6450551,6449306,6448615	6473984,6465732,6458296,6457847,6457476,6457029,6456175,6451438,6451060,6450621,6449446,6449180	Gene ID= ENSG00000110171.19 TPM= 36.78 Transcript Type= protein_coding
chr11	6448615	6473962	6448615	6473962	-	transcript1025.chr11.nic@TRIM3	transcript1025.chr11.nic	protein_coding	6473791,6465565,6458065,6457696,6457296,6456297,6456072,6451271,6450892,6449306,6448615	6473962,6465732,6458296,6457847,6457476,6457029,6456175,6451438,6451060,6450621,6449180	Gene ID= ENSG00000110171.19 TPM= 17.51 Transcript Type= NA
chr11	6448613	6473906	6448613	6473906	-	transcript1026.chr11.nic@TRIM3	transcript1026.chr11.nic	protein_coding	6473791,6465565,6458065,6457696,6457296,6456297,6456072,6451271,6450892,6448613	6473906,6465732,6458296,6457847,6457476,6457029,6456175,6451438,6451060,6450621	Gene ID= ENSG00000110171.19 TPM= 2.34 Transcript Type= NA
chr11	6476519	6481388	6476519	6481388	-	transcript1031.chr11.nic@ARFIP2	transcript1031.chr11.nic	protein_coding	6481231,6480323,6479972,6479140,6478738,6478579,6478041,6477718,6476519	6481388,6480423,6480068,6479258,6478959,6478652,6478198,6477892,6477268	Gene ID= ENSG00000132254.12 TPM= 4.09 Transcript Type= NA
chr11	6476519	6481436	6476519	6481436	-	ENST00000396777.7@ARFIP2	ENST00000396777.7	protein_coding	6481231,6480323,6479972,6479140,6478738,6478041,6477718,6476519	6481436,6480463,6480068,6479258,6478959,6478198,6477892,6477268	Gene ID= ENSG00000132254.12 TPM= 21.6 Transcript Type= protein_coding
chr11	6481447	6484679	6481447	6484679	+	ENST00000254616.10@TIMM10B	ENST00000254616.10	protein_coding	6481447,6481757,6482045	6481555,6481852,6484679	Gene ID= ENSG00000132286.11 TPM= 82.9 Transcript Type= protein_coding
chr11	6481467	6484681	6481467	6484681	+	transcript1051.chr11.nic@AC084337.2	transcript1051.chr11.nic	protein_coding	6481467,6481757	6481555,6484681	Gene ID= ENSG00000283977.1 TPM= 2.34 Transcript Type= NA
chr11	6546043	6549037	6546043	6549037	+	ENST00000533649.1@DNHD1	ENST00000533649.1	protein_coding	6546043,6547863,6548645	6547666,6548402,6549037	Gene ID= ENSG00000179532.12 TPM= 1.17 Transcript Type= retained_intron
chr11	6592368	6596746	6592368	6596746	-	transcript1095.chr11.nnic@NA	transcript1095.chr11.nnic	NA	6592368	6596746	Gene ID= novel_gene_chr11_1096 TPM= 2.34 Transcript Type= NA
chr11	6599920	6603634	6599920	6603634	-	transcript1085.chr11.nic@RRP8	transcript1085.chr11.nic	protein_coding	6603404,6601852,6601149,6600926,6600669,6600486,6599920	6603634,6602264,6601602,6601055,6600775,6600582,6600265	Gene ID= ENSG00000132275.10 TPM= 4.67 Transcript Type= NA
chr11	6603708	6610874	6603708	6610874	+	ENST00000532063.5@ILK	ENST00000532063.5	protein_coding	6603708,6604226,6608394,6608694,6608884,6609071,6609299,6609512,6609724,6609936,6610148,6610462	6603822,6604360,6608489,6608790,6608967,6609156,6609408,6609639,6609845,6610035,6610278,6610874	Gene ID= ENSG00000166333.13 TPM= 13.3 Transcript Type= protein_coding
chr11	6603758	6610833	6603758	6610833	+	ENST00000420936.6@ILK	ENST00000420936.6	protein_coding	6603758,6604226,6608046,6608394,6608694,6608884,6609071,6609299,6609512,6609724,6609936,6610148,6610462	6603822,6604360,6608211,6608489,6608790,6608967,6609156,6609408,6609639,6609845,6610035,6610278,6610833	Gene ID= ENSG00000166333.13 TPM= 235.85 Transcript Type= protein_coding
chr11	6603731	6610870	6603731	6610870	+	ENST00000299421.8@ILK	ENST00000299421.8	protein_coding	6603731,6604180,6608046,6608394,6608694,6608884,6609071,6609299,6609512,6609724,6609936,6610148,6610462	6603822,6604360,6608211,6608489,6608790,6608967,6609156,6609408,6609639,6609845,6610035,6610278,6610870	Gene ID= ENSG00000166333.13 TPM= 97.7 Transcript Type= protein_coding
chr11	6603744	6610835	6603744	6610835	+	ENST00000537806.5@ILK	ENST00000537806.5	protein_coding	6603744,6604226,6608046,6608394,6608694,6609071,6609299,6609512,6609724,6609936,6610148,6610462	6603822,6604360,6608211,6608489,6608967,6609156,6609408,6609639,6609845,6610035,6610278,6610835	Gene ID= ENSG00000166333.13 TPM= 3.5 Transcript Type= protein_coding
chr11	6603816	6610870	6603816	6610870	+	ENST00000396751.6@ILK	ENST00000396751.6	protein_coding	6603816,6608046,6608394,6608694,6608884,6609071,6609299,6609512,6609724,6609936,6610148,6610462	6604360,6608211,6608489,6608790,6608967,6609156,6609408,6609639,6609845,6610035,6610278,6610870	Gene ID= ENSG00000166333.13 TPM= 12.47 Transcript Type= protein_coding
chr11	6610842	6612667	6610842	6612667	-	ENST00000299424.8@TAF10	ENST00000299424.8	protein_coding	6611958,6611664,6611388,6611189,6610842	6612667,6611818,6611452,6611303,6611011	Gene ID= ENSG00000166337.9 TPM= 82.32 Transcript Type= protein_coding
chr11	6610842	6612231	6610842	6612231	-	transcript1091.chr11.nic@TAF10	transcript1091.chr11.nic	protein_coding	6611664,6611388,6611189,6610842	6612231,6611452,6611303,6611011	Gene ID= ENSG00000166337.9 TPM= 13.43 Transcript Type= NA
chr11	6612763	6619461	6612763	6619461	-	ENST00000299427.10@TPP1	ENST00000299427.10	protein_coding	6619384,6619196,6618776,6617626,6617301,6616975,6616661,6616315,6616005,6615442,6615171,6614866,6612763	6619461,6619267,6618915,6617776,6617428,6617153,6616859,6616503,6616074,6615562,6615329,6614991,6614686	Gene ID= ENSG00000166340.15 TPM= 113.26 Transcript Type= protein_coding
chr11	6612772	6619354	6612772	6619354	-	ENST00000533371.5@TPP1	ENST00000533371.5	protein_coding	6619196,6618776,6617626,6617301,6616975,6616661,6616315,6616005,6615442,6615171,6614866,6612772	6619354,6618915,6617776,6617428,6617153,6616859,6616503,6616074,6615562,6615329,6614991,6614686	Gene ID= ENSG00000166340.15 TPM= 42.03 Transcript Type= protein_coding
chr11	6621323	6655854	6621323	6655854	-	ENST00000299441.4@DCHS1	ENST00000299441.4	protein_coding	6655563,6639817,6634118,6633789,6633412,6632031,6631616,6631311,6631053,6629999,6629672,6629452,6628621,6626789,6626552,6626169,6625920,6625597,6625198,6624730,6621323	6655854,6641733,6634306,6634020,6633648,6633056,6631809,6631407,6631210,6630863,6629911,6629577,6628830,6627667,6626665,6626380,6626074,6625727,6625481,6624868,6624390	Gene ID= ENSG00000166341.7 TPM= 89.9 Transcript Type= protein_coding
chr11	6680782	6683401	6680782	6683401	-	ENST00000288937.6@MRPL17	ENST00000288937.6	protein_coding	6683123,6682747,6680782	6683401,6682815,6682402	Gene ID= ENSG00000158042.8 TPM= 5.84 Transcript Type= protein_coding
chr11	6681951	6683296	6681951	6683296	-	ENST00000529958.1@MRPL17	ENST00000529958.1	protein_coding	6682747,6681951	6683296,6682402	Gene ID= ENSG00000158042.8 TPM= 1.17 Transcript Type= retained_intron
chr11	6926423	6957837	6926423	6957837	+	ENST00000278319.9@ZNF215	ENST00000278319.9	protein_coding	6926423,6927662,6932094,6941571,6943083,6943546,6955690	6926685,6927807,6932672,6941653,6943215,6943641,6957837	Gene ID= ENSG00000149054.15 TPM= 1.17 Transcript Type= protein_coding
chr11	6999318	7020368	6999318	7020368	-	ENST00000278314.4@ZNF214	ENST00000278314.4	protein_coding	7020073,7002709,6999318	7020368,7002855,7001555	Gene ID= ENSG00000149050.9 TPM= 1.17 Transcript Type= protein_coding
chr11	7485495	7489024	7485495	7489024	+	transcript1130.chr11.nic@OLFML1	transcript1130.chr11.nic	protein_coding	7485495,7485875,7488127	7485636,7486004,7489024	Gene ID= ENSG00000183801.7 TPM= 2.34 Transcript Type= NA
chr11	7485482	7511377	7485482	7511377	+	ENST00000329293.3@OLFML1	ENST00000329293.3	protein_coding	7485482,7488127,7509398	7486004,7488415,7511377	Gene ID= ENSG00000183801.7 TPM= 10.51 Transcript Type= protein_coding
chr11	7513770	7653756	7513770	7653756	+	ENST00000299492.8@PPFIBP2	ENST00000299492.8	protein_coding	7513770,7549440,7565553,7593132,7597560,7610291,7620935,7625777,7628285,7629459,7630925,7632867,7634495,7635552,7639732,7641479,7642298,7648387,7648800,7649147,7649532,7650840,7651656,7653024	7514121,7549539,7565767,7593224,7597673,7610422,7621027,7625891,7628346,7629534,7631028,7632934,7634552,7635593,7639870,7641620,7642426,7648537,7648911,7649235,7649654,7650965,7651844,7653756	Gene ID= ENSG00000166387.11 TPM= 14.59 Transcript Type= protein_coding
chr11	7605738	7653760	7605738	7653760	+	ENST00000530181.5@PPFIBP2	ENST00000530181.5	protein_coding	7605738,7610291,7620935,7625777,7628285,7629459,7630925,7632867,7634495,7635552,7639732,7641479,7642298,7648387,7648800,7649147,7649532,7650840,7651656,7653024	7606015,7610422,7621027,7625891,7628346,7629534,7631028,7632934,7634552,7635593,7639870,7641620,7642426,7648537,7648911,7649235,7649654,7650965,7651844,7653760	Gene ID= ENSG00000166387.11 TPM= 1.75 Transcript Type= protein_coding
chr11	7665100	7673501	7665100	7673501	-	ENST00000299498.10@CYB5R2	ENST00000299498.10	protein_coding	7673419,7672748,7672451,7669625,7669205,7668478,7667728,7666451,7665100	7673501,7672891,7672523,7669731,7669334,7668561,7667813,7666550,7665546	Gene ID= ENSG00000166394.14 TPM= 2.34 Transcript Type= protein_coding
chr11	7676323	7679396	7676323	7679396	-	transcript1151.chr11.nnic@NA	transcript1151.chr11.nnic	NA	7676323	7679396	Gene ID= novel_gene_chr11_1152 TPM= 2.34 Transcript Type= NA
chr11	7853615	7856084	7853615	7856084	-	transcript1153.chr11.nnic@NA	transcript1153.chr11.nnic	NA	7853615	7856084	Gene ID= novel_gene_chr11_1154 TPM= 3.5 Transcript Type= NA
chr11	7987320	7996169	7987320	7996169	+	ENST00000309828.4@EIF3F	ENST00000309828.4	protein_coding	7987320,7991781,7992084,7992887,7994426,7994982,7995254,7995945	7987716,7991851,7992163,7993024,7994517,7995118,7995367,7996169	Gene ID= ENSG00000175390.13 TPM= 281.39 Transcript Type= protein_coding
chr11	8108942	8169055	8108942	8169055	-	ENST00000343202.8@RIC3	ENST00000343202.8	protein_coding	8168866,8139967,8138272,8137378,8126659,8108942	8169055,8140193,8138347,8137471,8126804,8111137	Gene ID= ENSG00000166405.14 TPM= 3.5 Transcript Type= protein_coding
chr11	8139054	8169025	8139054	8169025	-	ENST00000419822.2@RIC3	ENST00000419822.2	protein_coding	8168866,8139054	8169025,8140193	Gene ID= ENSG00000166405.14 TPM= 1.17 Transcript Type= protein_coding
chr11	8391868	8594226	8391868	8594226	-	transcript1165.chr11.nnic@STK33	transcript1165.chr11.nnic	protein_coding	8594083,8480410,8474681,8473163,8464709,8461805,8457341,8454744,8452822,8440678,8436027,8435494,8413495,8391868	8594226,8480614,8475066,8473276,8464822,8461909,8457479,8454832,8452906,8440753,8436139,8435579,8413692,8392710	Gene ID= ENSG00000130413.15 TPM= 2.34 Transcript Type= NA
chr11	8391868	8594280	8391868	8594280	-	transcript1166.chr11.nic@STK33	transcript1166.chr11.nic	protein_coding	8594083,8480483,8474681,8473163,8464709,8461805,8457341,8454744,8452822,8440678,8436027,8435494,8413495,8391868	8594280,8480614,8475066,8473276,8464822,8461909,8457479,8454832,8452906,8440753,8436139,8435579,8413692,8392710	Gene ID= ENSG00000130413.15 TPM= 2.34 Transcript Type= NA
chr11	8612037	8671866	8612037	8671866	-	ENST00000402157.6@TRIM66	ENST00000402157.6	protein_coding	8671786,8663129,8654434,8651800,8649740,8648416,8647970,8646447,8645741,8643009,8640227,8638654,8624713,8624359,8622816,8621645,8621032,8620446,8620050,8619383,8618750,8612037	8671866,8663248,8654578,8651903,8649887,8648548,8648080,8646561,8645887,8643126,8641152,8638815,8625228,8624551,8622876,8621819,8621321,8620572,8620124,8619535,8618968,8618003	Gene ID= ENSG00000166436.15 TPM= 1.17 Transcript Type= protein_coding
chr11	8682411	8689872	8682411	8689872	+	ENST00000314138.10@RPL27A	ENST00000314138.10	protein_coding	8682411,8683202,8684006,8684718,8685678	8682816,8683265,8684081,8684892,8689872	Gene ID= ENSG00000166441.12 TPM= 157.63 Transcript Type= protein_coding
chr11	8682810	8685848	8682810	8685848	+	ENST00000530022.5@RPL27A	ENST00000530022.5	protein_coding	8682810,8684006,8684718,8685678	8683265,8684081,8684892,8685848	Gene ID= ENSG00000166441.12 TPM= 23.35 Transcript Type= protein_coding
chr11	8682792	8685848	8682792	8685848	+	ENST00000532359.5@RPL27A	ENST00000532359.5	protein_coding	8682792,8683202,8684006,8684823,8685678	8682816,8683265,8684081,8684892,8685848	Gene ID= ENSG00000166441.12 TPM= 9.34 Transcript Type= protein_coding
chr11	8693352	8871402	8693352	8871402	-	transcript1177.chr11.nic@ST5	transcript1177.chr11.nic	protein_coding	8871334,8870954,8839310,8811247,8750621,8729950,8726073,8717741,8715603,8714610,8713998,8712551,8711122,8710845,8707777,8707085,8702572,8699213,8698933,8697525,8696427,8695463,8693352	8871402,8871088,8839350,8811335,8750725,8731209,8726209,8717892,8715818,8714706,8714042,8712735,8711231,8710914,8707854,8707225,8702720,8699390,8698974,8697636,8696666,8695549,8694130	Gene ID= ENSG00000166444.18 TPM= 32.69 Transcript Type= NA
chr11	8911140	8920084	8911140	8920084	+	ENST00000309377.8@AKIP1	ENST00000309377.8	protein_coding	8911140,8911444,8912453,8914826,8917287,8919337	8911223,8911671,8912533,8914930,8917367,8920084	Gene ID= ENSG00000166452.11 TPM= 8.76 Transcript Type= protein_coding
chr11	8911139	8920084	8911139	8920084	+	ENST00000299576.9@AKIP1	ENST00000299576.9	protein_coding	8911139,8911444,8914826,8917287,8919337	8911223,8911671,8914930,8917367,8920084	Gene ID= ENSG00000166452.11 TPM= 8.76 Transcript Type= protein_coding
chr11	8947294	8964773	8947294	8964773	-	ENST00000534025.5@TMEM9B	ENST00000534025.5	protein_coding	8964209,8962092,8956190,8953203,8947294	8964773,8962183,8956298,8953337,8948475	Gene ID= ENSG00000175348.10 TPM= 197.91 Transcript Type= protein_coding
chr11	8947294	8964441	8947294	8964441	-	ENST00000309134.9@TMEM9B	ENST00000309134.9	protein_coding	8964209,8956190,8953203,8947294	8964441,8956298,8953337,8948475	Gene ID= ENSG00000175348.10 TPM= 14.59 Transcript Type= protein_coding
chr11	8980576	9004049	8980576	9004049	-	ENST00000309166.7@NRIP3	ENST00000309166.7	protein_coding	9003762,8988118,8987548,8985711,8984072,8983875,8980576	9004049,8988282,8987630,8985850,8984124,8983969,8983560	Gene ID= ENSG00000175352.10 TPM= 2.34 Transcript Type= protein_coding
chr11	9020884	9091697	9020884	9091697	-	transcript1203.chr11.nic@SCUBE2	transcript1203.chr11.nic	protein_coding	9091396,9089707,9079384,9074481,9069370,9066697,9065891,9060408,9059303,9055793,9053637,9053099,9052746,9050606,9047943,9047356,9033626,9030758,9029884,9027364,9025702,9021876,9020884	9091697,9089829,9079509,9074615,9069495,9066813,9065980,9060524,9059425,9055909,9053759,9053215,9052832,9050710,9048098,9047562,9033796,9030925,9030045,9027561,9025854,9021955,9021197	Gene ID= ENSG00000175356.12 TPM= 5.84 Transcript Type= NA
chr11	9019660	9091749	9019660	9091749	-	transcript1206.chr11.nnic@SCUBE2	transcript1206.chr11.nnic	protein_coding	9091396,9089707,9079384,9074481,9069370,9066697,9065891,9060408,9059303,9055793,9050606,9047943,9047356,9033626,9030758,9029884,9027364,9025702,9021876,9019660	9091749,9089829,9079509,9074615,9069495,9066813,9065980,9060524,9059425,9055909,9050710,9048098,9047562,9033796,9030925,9030045,9027561,9025854,9021955,9021197	Gene ID= ENSG00000175356.12 TPM= 2.34 Transcript Type= NA
chr11	9020884	9091749	9020884	9091749	-	transcript1211.chr11.nic@SCUBE2	transcript1211.chr11.nic	protein_coding	9091396,9089707,9079384,9074481,9069370,9066697,9065891,9060408,9059303,9055793,9053637,9047356,9033626,9030758,9029884,9027364,9025702,9021876,9020884	9091749,9089829,9079509,9074615,9069495,9066813,9065980,9060524,9059425,9055909,9053759,9047562,9033796,9030925,9030045,9027561,9025854,9021955,9021197	Gene ID= ENSG00000175356.12 TPM= 3.5 Transcript Type= NA
chr11	9138825	9265392	9138825	9265392	-	transcript1217.chr11.nnic@DENND5A	transcript1217.chr11.nnic	protein_coding	9265284,9264961,9207561,9206673,9203660,9193494,9180767,9178858,9178132,9170627,9169856,9165836,9160713,9152358,9150680,9150081,9147030,9145670,9144995,9144097,9143403,9142722,9141940,9138825	9265392,9265105,9207632,9206782,9204317,9193681,9181084,9179073,9178366,9170777,9169949,9165967,9160865,9152442,9150764,9150209,9147151,9145815,9145113,9144278,9143485,9142845,9142108,9139854	Gene ID= ENSG00000184014.7 TPM= 6.22 Transcript Type= NA
chr11	9138825	9265344	9138825	9265344	-	transcript1224.chr11.nic@DENND5A	transcript1224.chr11.nic	protein_coding	9264961,9207561,9206673,9203660,9193494,9180767,9178858,9178132,9170627,9169856,9165836,9160713,9152358,9150680,9150081,9147030,9145670,9144995,9144097,9142722,9141940,9138825	9265344,9207632,9206782,9204317,9193681,9181084,9179073,9178366,9170777,9169949,9165967,9160865,9152442,9150764,9150209,9147151,9145815,9145113,9144278,9142845,9142108,9139854	Gene ID= ENSG00000184014.7 TPM= 7.39 Transcript Type= NA
chr11	9138825	9265390	9138825	9265390	-	ENST00000328194.7@DENND5A	ENST00000328194.7	protein_coding	9264961,9207561,9206673,9203660,9193494,9180767,9178858,9178132,9170627,9169856,9165836,9160713,9152358,9150680,9150081,9147030,9145670,9144995,9144097,9143403,9142722,9141940,9138825	9265390,9207632,9206782,9204317,9193681,9181084,9179073,9178366,9170777,9169949,9165967,9160865,9152442,9150764,9150209,9147151,9145815,9145113,9144278,9143485,9142845,9142108,9139854	Gene ID= ENSG00000184014.7 TPM= 54.09 Transcript Type= protein_coding
chr11	9280671	9314780	9280671	9314780	-	ENST00000528080.5@TMEM41B	ENST00000528080.5	protein_coding	9314321,9299584,9295259,9288442,9287702,9286455,9280671	9314780,9299701,9295387,9288535,9287806,9286593,9283593	Gene ID= ENSG00000166471.10 TPM= 89.9 Transcript Type= protein_coding
chr11	9384622	9448126	9384622	9448126	+	ENST00000379719.7@IPO7	ENST00000379719.7	protein_coding	9384622,9403290,9408486,9409928,9414255,9417059,9420411,9420614,9423006,9423777,9424914,9425146,9428540,9429031,9429674,9430875,9433570,9433721,9434934,9436271,9437754,9438080,9440455,9442081,9445097	9384847,9403371,9408639,9410086,9414411,9417148,9420505,9420698,9423140,9423876,9424990,9425262,9428629,9429196,9429834,9431003,9433636,9433846,9435031,9436366,9437974,9438285,9440661,9442197,9448126	Gene ID= ENSG00000205339.9 TPM= 15.18 Transcript Type= protein_coding
chr11	9459556	9460702	9459556	9460702	-	ENST00000596206.2@AC132192.2	ENST00000596206.2	antisense_RNA	9459556	9460702	Gene ID= ENSG00000268403.2 TPM= 3.5 Transcript Type= antisense_RNA
chr11	9460965	9528524	9460965	9528524	+	ENST00000396602.6@ZNF143	ENST00000396602.6	protein_coding	9460965,9471302,9472677,9473941,9474550,9478390,9479472,9494646,9496303,9497675,9501091,9508619,9512448,9516201,9525240,9527530	9461076,9471420,9472769,9474024,9474633,9478586,9479546,9494765,9496378,9497800,9501270,9508846,9512596,9516362,9525386,9528524	Gene ID= ENSG00000166478.9 TPM= 31.53 Transcript Type= protein_coding
chr11	9575542	9589752	9575542	9589752	+	transcript1263.chr11.nic@WEE1	transcript1263.chr11.nic	protein_coding	9575542,9576230,9576487,9577142,9581532,9585258,9585442,9586449,9586711,9588449	9576093,9576293,9576659,9577263,9581678,9585353,9585527,9586619,9586856,9589752	Gene ID= ENSG00000166483.10 TPM= 4.67 Transcript Type= NA
chr11	9664077	9752991	9664077	9752991	+	ENST00000318950.10@SWAP70	ENST00000318950.10	protein_coding	9664077,9694146,9713466,9724658,9728053,9729343,9732529,9738213,9740181,9747858,9749087,9749864	9664278,9694286,9713639,9724885,9728199,9729451,9732710,9738320,9740347,9748056,9749183,9752991	Gene ID= ENSG00000133789.14 TPM= 94.96 Transcript Type= protein_coding
chr11	9664077	9751821	9664077	9751821	+	ENST00000447399.6@SWAP70	ENST00000447399.6	protein_coding	9664077,9694146,9724658,9728053,9729343,9732529,9738213,9740181,9747858,9749087,9749864	9664278,9694286,9724885,9728199,9729451,9732710,9738320,9740347,9748056,9749183,9751821	Gene ID= ENSG00000133789.14 TPM= 6.22 Transcript Type= protein_coding
chr11	9664135	9741953	9664135	9741953	+	ENST00000524817.5@SWAP70	ENST00000524817.5	protein_coding	9664135,9694146,9713466,9724658,9728053,9729343,9732529,9738213,9740181	9664278,9694286,9713639,9724885,9728199,9729451,9732710,9738320,9741953	Gene ID= ENSG00000133789.14 TPM= 3.5 Transcript Type= retained_intron
chr11	10304680	10307397	10304680	10307397	+	ENST00000278175.9@ADM	ENST00000278175.9	protein_coding	10304680,10305680,10305949,10306332	10305229,10305798,10306098,10307397	Gene ID= ENSG00000148926.9 TPM= 23.35 Transcript Type= protein_coding
chr11	10305084	10307355	10305084	10307355	+	ENST00000528655.5@ADM	ENST00000528655.5	protein_coding	10305084,10305949,10306332	10305798,10306098,10307355	Gene ID= ENSG00000148926.9 TPM= 1.17 Transcript Type= protein_coding
chr11	10511678	10541217	10511678	10541217	-	ENST00000265981.6@RNF141	ENST00000265981.6	protein_coding	10541122,10534016,10530643,10525192,10519034,10511678	10541217,10534205,10530751,10525373,10519141,10515066	Gene ID= ENSG00000110315.6 TPM= 12.84 Transcript Type= protein_coding
chr11	10555413	10557686	10555413	10557686	-	transcript1308.chr11.nnic@NA	transcript1308.chr11.nnic	NA	10555413	10557686	Gene ID= novel_gene_chr11_1309 TPM= 3.5 Transcript Type= NA
chr11	10556966	10568691	10556966	10568691	-	ENST00000256178.7@LYVE1	ENST00000256178.7	protein_coding	10568448,10564203,10563940,10560495,10559816,10556966	10568691,10564374,10564079,10560800,10559894,10559297	Gene ID= ENSG00000133800.8 TPM= 3.5 Transcript Type= protein_coding
chr11	10573095	10693585	10573095	10693585	-	transcript1311.chr11.nic@MRVI1	transcript1311.chr11.nic	protein_coding	10693462,10690265,10633968,10631991,10629538,10628751,10627973,10627716,10625966,10623778,10609728,10606742,10604405,10603120,10600918,10594146,10593492,10591548,10581867,10580455,10573095	10693585,10690369,10634071,10632061,10629711,10628828,10628025,10627760,10626583,10623856,10609851,10606772,10604545,10603251,10601059,10594195,10593599,10591612,10581986,10580589,10576575	Gene ID= ENSG00000072952.18 TPM= 36.2 Transcript Type= NA
chr11	10750987	10779743	10750987	10779743	+	ENST00000361367.6@CTR9	ENST00000361367.6	protein_coding	10750987,10752672,10754958,10755678,10756749,10760173,10761947,10763431,10763643,10764112,10764308,10764548,10766402,10767806,10768074,10768343,10770210,10770487,10771545,10772520,10773127,10774012,10775207,10775521,10778679	10751457,10752770,10755197,10755795,10756838,10760321,10762054,10763538,10763879,10764201,10764436,10764731,10766490,10767991,10768161,10768491,10770326,10770632,10771616,10772655,10773273,10774169,10775303,10775633,10779743	Gene ID= ENSG00000198730.7 TPM= 68.89 Transcript Type= protein_coding
chr11	10797054	10809110	10797054	10809110	-	ENST00000339995.9@EIF4G2	ENST00000339995.9	protein_coding	10808705,10807255,10806820,10805907,10804913,10804287,10804137,10803899,10803480,10803211,10803030,10802294,10802049,10801661,10800962,10800731,10800432,10800090,10799552,10799213,10798992,10797054	10809110,10807381,10806885,10806047,10805015,10804418,10804203,10804050,10803590,10803294,10803128,10802435,10802209,10801774,10801087,10800835,10800647,10800348,10799756,10799424,10799113,10797881	Gene ID= ENSG00000110321.16 TPM= 948.45 Transcript Type= protein_coding
chr11	10797050	10807973	10797050	10807973	-	ENST00000526148.5@EIF4G2	ENST00000526148.5	protein_coding	10807549,10807255,10806820,10805907,10804913,10804287,10804137,10803899,10803480,10803211,10803030,10802294,10802049,10801661,10800962,10800731,10800432,10800090,10799552,10799213,10798992,10797050	10807973,10807381,10806885,10806047,10805015,10804418,10804203,10804050,10803590,10803294,10803128,10802435,10802209,10801774,10801087,10800835,10800647,10800348,10799756,10799424,10799113,10797881	Gene ID= ENSG00000110321.16 TPM= 39.8 Transcript Type= protein_coding
chr11	10852704	10858073	10852704	10858073	-	ENST00000432999.6@ZBED5	ENST00000432999.6	protein_coding	10857862,10856144,10852704	10858073,10856257,10855118	Gene ID= ENSG00000236287.7 TPM= 2.34 Transcript Type= protein_coding
chr11	10852800	10858068	10852800	10858068	-	transcript1365.chr11.nic@ZBED5	transcript1365.chr11.nic	protein_coding	10856144,10852800	10858068,10855086	Gene ID= ENSG00000236287.7 TPM= 4.67 Transcript Type= NA
chr11	10852796	10858053	10852796	10858053	-	transcript1366.chr11.nnic@NA	transcript1366.chr11.nnic	NA	10852796	10858053	Gene ID= novel_gene_chr11_1367 TPM= 8.17 Transcript Type= NA
chr11	10858259	10879276	10858259	10879276	+	ENST00000501079.5@ZBED5-AS1	ENST00000501079.5	antisense_RNA	10858259,10865261,10878381	10858366,10865327,10879276	Gene ID= ENSG00000247271.6 TPM= 4.67 Transcript Type= antisense_RNA
chr11	10884885	10899322	10884885	10899322	-	ENST00000503469.2@AC069360.1	ENST00000503469.2	lincRNA	10899132,10884885	10899322,10885124	Gene ID= ENSG00000250041.2 TPM= 3.5 Transcript Type= lincRNA
chr11	10895618	10899321	10895618	10899321	-	transcript1375.chr11.nnic@NA	transcript1375.chr11.nnic	NA	10895618	10899321	Gene ID= novel_gene_chr11_1376 TPM= 2.34 Transcript Type= NA
chr11	11270876	11622005	11270876	11622005	-	ENST00000227756.4@GALNT18	ENST00000227756.4	protein_coding	11621359,11448744,11432621,11379081,11377182,11372515,11340819,11332694,11327086,11293029,11270876	11622005,11448936,11432787,11379264,11377379,11372629,11341004,11332831,11327181,11293193,11271290	Gene ID= ENSG00000110328.5 TPM= 356.12 Transcript Type= protein_coding
chr11	11332455	11334553	11332455	11334553	+	transcript1399.chr11.nnic@NA	transcript1399.chr11.nnic	NA	11332455	11334553	Gene ID= novel_gene_chr11_1400 TPM= 3.5 Transcript Type= NA
chr11	11570084	11573782	11570084	11573782	+	ENST00000527726.1@AC104031.1	ENST00000527726.1	antisense_RNA	11570084,11573525	11570197,11573782	Gene ID= ENSG00000255462.1 TPM= 1.17 Transcript Type= antisense_RNA
chr11	11616006	11622011	11616006	11622011	-	transcript1401.chr11.nnic@NA	transcript1401.chr11.nnic	NA	11616006	11622011	Gene ID= novel_gene_chr11_1402 TPM= 9.34 Transcript Type= NA
chr11	11841423	11959323	11841423	11959323	+	ENST00000339865.9@USP47	ENST00000339865.9	protein_coding	11841423,11884467,11891968,11897597,11902715,11903263,11905399,11920156,11920342,11922724,11929434,11930044,11930696,11933004,11933831,11936303,11938257,11940429,11942335,11947945,11948478,11949889,11950364,11952741,11954897,11955034,11956001	11842224,11884580,11892106,11897693,11902860,11903342,11905548,11920251,11920494,11922891,11929565,11930120,11930751,11933116,11933935,11936510,11938372,11940548,11943112,11948120,11948558,11950004,11950482,11952871,11954944,11955164,11959323	Gene ID= ENSG00000170242.17 TPM= 5.84 Transcript Type= protein_coding
chr11	11841964	11942970	11841964	11942970	+	transcript1430.chr11.nic@USP47	transcript1430.chr11.nic	protein_coding	11841964,11880177,11884467,11891968,11897597,11902715,11903263,11905399,11920156,11920342,11922724,11929434,11930044,11930696,11933004,11933831,11936303,11938257,11940429,11942335	11842224,11880380,11884580,11892106,11897693,11902860,11903342,11905548,11920251,11920494,11922891,11929565,11930120,11930751,11933116,11933935,11936510,11938372,11940548,11942970	Gene ID= ENSG00000170242.17 TPM= 5.84 Transcript Type= NA
chr11	11841975	11956421	11841975	11956421	+	ENST00000527733.5@USP47	ENST00000527733.5	protein_coding	11841975,11880177,11884467,11891968,11897597,11902715,11903263,11905399,11920156,11920342,11922724,11929434,11930044,11930696,11933004,11933831,11936303,11938257,11940429,11942335,11947945,11948478,11949889,11950364,11952741,11954897,11955034,11956001	11842224,11880380,11884580,11892106,11897693,11902860,11903342,11905548,11920251,11920494,11922891,11929565,11930120,11930751,11933116,11933935,11936510,11938372,11940548,11943112,11948120,11948558,11950004,11950482,11952871,11954944,11955164,11956421	Gene ID= ENSG00000170242.17 TPM= 31.53 Transcript Type= protein_coding
chr11	11892382	11896239	11892382	11896239	-	transcript1473.chr11.nnic@NA	transcript1473.chr11.nnic	NA	11892382	11896239	Gene ID= novel_gene_chr11_1474 TPM= 8.17 Transcript Type= NA
chr11	11963106	12009370	11963106	12009370	-	ENST00000326932.8@DKK3	ENST00000326932.8	protein_coding	12009172,12008370,12002300,11998696,11968395,11966954,11965809,11963106	12009370,12008608,12002437,11998779,11968487,11967098,11965965,11964686	Gene ID= ENSG00000050165.17 TPM= 324.96 Transcript Type= protein_coding
chr11	11963036	12008663	11963036	12008663	-	transcript1457.chr11.nic@DKK3	transcript1457.chr11.nic	protein_coding	12008370,12002300,11998696,11968395,11966954,11965809,11963036	12008663,12002437,11998779,11968487,11967098,11965965,11964686	Gene ID= ENSG00000050165.17 TPM= 32.48 Transcript Type= NA
chr11	11963106	12009082	11963106	12009082	-	ENST00000396505.6@DKK3	ENST00000396505.6	protein_coding	12008870,12008370,12002300,11998696,11968395,11966954,11965809,11963106	12009082,12008608,12002437,11998779,11968487,11967098,11965965,11964686	Gene ID= ENSG00000050165.17 TPM= 20.22 Transcript Type= protein_coding
chr11	12110576	12263785	12110576	12263785	+	transcript1477.chr11.nic@MICAL2	transcript1477.chr11.nic	protein_coding	12110576,12138390,12162079,12204250,12208023,12209497,12213255,12216219,12220201,12221644,12222617,12223411,12224673,12226171,12227025,12236177,12239436,12249184,12256785,12258468,12259795	12110726,12138460,12162419,12204457,12208139,12209598,12213410,12216319,12220458,12221759,12222743,12223501,12224820,12226370,12227131,12236245,12239585,12249246,12256971,12258556,12263785	Gene ID= ENSG00000133816.13 TPM= 21.8 Transcript Type= NA
chr11	12110576	12263785	12110576	12263785	+	transcript1478.chr11.nic@MICAL2	transcript1478.chr11.nic	protein_coding	12110576,12138390,12162079,12204250,12208023,12209497,12213255,12216219,12220201,12221644,12222617,12223411,12224673,12226171,12227025,12236177,12239436,12256785,12258468,12259795	12110726,12138460,12162419,12204457,12208139,12209598,12213410,12216319,12220458,12221759,12222743,12223501,12224820,12226370,12227131,12236245,12239585,12256971,12258556,12263785	Gene ID= ENSG00000133816.13 TPM= 32.89 Transcript Type= NA
chr11	12110590	12263785	12110590	12263785	+	transcript1481.chr11.nnic@MICAL2	transcript1481.chr11.nnic	protein_coding	12110590,12162079,12204250,12208023,12209497,12213255,12216219,12220201,12221644,12222617,12223411,12224673,12226171,12227025,12236177,12239436,12256785,12258468,12259795	12110726,12162419,12204457,12208139,12209598,12213410,12216319,12220458,12221759,12222743,12223501,12224820,12226370,12227131,12236245,12239585,12256971,12258556,12263785	Gene ID= ENSG00000133816.13 TPM= 21.22 Transcript Type= NA
chr11	12110576	12219555	12110576	12219555	+	transcript1485.chr11.nic@MICAL2	transcript1485.chr11.nic	protein_coding	12110576,12138390,12162079,12204250,12208023,12209497,12213255,12216219	12110726,12138460,12162419,12204457,12208139,12209598,12213410,12219555	Gene ID= ENSG00000133816.13 TPM= 14.59 Transcript Type= NA
chr11	12110576	12165155	12110576	12165155	+	transcript1487.chr11.nic@MICAL2	transcript1487.chr11.nic	protein_coding	12110576,12138390,12162079	12110726,12138460,12165155	Gene ID= ENSG00000133816.13 TPM= 5.84 Transcript Type= NA
chr11	12110590	12165155	12110590	12165155	+	transcript1488.chr11.nnic@MICAL2	transcript1488.chr11.nnic	protein_coding	12110590,12162079	12110726,12165155	Gene ID= ENSG00000133816.13 TPM= 2.92 Transcript Type= NA
chr11	12377185	12530801	12377185	12530801	+	ENST00000334956.12@PARVA	ENST00000334956.12	protein_coding	12377185,12473745,12473913,12477847,12496458,12504314,12508584,12511514,12513299,12513997,12517610,12518445,12527849	12377783,12473834,12473983,12477949,12496598,12504429,12508642,12511533,12513360,12514065,12517711,12518517,12530801	Gene ID= ENSG00000197702.11 TPM= 60.71 Transcript Type= protein_coding
chr11	12377530	12508122	12377530	12508122	+	transcript1498.chr11.nic@PARVA	transcript1498.chr11.nic	protein_coding	12377530,12473745,12473913,12477847,12496458,12504314	12377783,12473834,12473983,12477949,12496598,12508122	Gene ID= ENSG00000197702.11 TPM= 2.34 Transcript Type= NA
chr11	12509077	12510936	12509077	12510936	-	transcript1505.chr11.nnic@NA	transcript1505.chr11.nnic	NA	12509077	12510936	Gene ID= novel_gene_chr11_1506 TPM= 4.67 Transcript Type= NA
chr11	12529407	12535328	12529407	12535328	+	transcript1501.chr11.nnic@NA	transcript1501.chr11.nnic	NA	12529407	12535328	Gene ID= novel_gene_chr11_1502 TPM= 9.34 Transcript Type= NA
chr11	12938791	12944736	12938791	12944736	+	transcript1511.chr11.nnic@NA	transcript1511.chr11.nnic	NA	12938791	12944736	Gene ID= novel_gene_chr11_1512 TPM= 31.53 Transcript Type= NA
chr11	13277743	13387266	13277743	13387266	+	transcript1514.chr11.nic@ARNTL	transcript1514.chr11.nic	protein_coding	13277743,13309987,13326413,13349945,13354301,13355226,13356739,13357055,13358434,13360345,13365500,13366665,13369618,13372163,13374095,13375612,13376640,13378337,13381161,13385689,13386596	13277923,13310059,13326467,13350070,13354448,13355296,13356777,13357096,13358591,13360424,13365592,13366782,13369767,13372409,13374201,13375762,13376728,13378445,13381254,13385791,13387266	Gene ID= ENSG00000133794.17 TPM= 8.17 Transcript Type= NA
chr11	13277743	13387266	13277743	13387266	+	transcript1519.chr11.nnic@ARNTL	transcript1519.chr11.nnic	protein_coding	13277743,13309987,13349945,13354301,13356739,13357055,13358434,13360345,13365500,13366665,13369618,13372163,13374095,13375612,13376640,13378322,13381161,13385689,13386596	13277923,13310059,13350070,13354448,13356777,13357096,13358591,13360424,13365592,13366782,13369767,13372409,13374201,13375762,13376728,13378445,13381254,13385791,13387266	Gene ID= ENSG00000133794.17 TPM= 2.34 Transcript Type= NA
chr11	13277833	13387266	13277833	13387266	+	transcript1521.chr11.nic@ARNTL	transcript1521.chr11.nic	protein_coding	13277833,13309987,13326413,13349945,13354301,13357055,13358434,13360345,13365500,13366665,13369618,13372163,13374095,13376640,13378337,13381161,13385689,13386596	13277923,13310059,13326467,13350070,13356777,13357096,13358591,13360424,13365592,13366782,13369767,13372409,13375762,13376728,13378445,13381254,13385791,13387266	Gene ID= ENSG00000133794.17 TPM= 2.34 Transcript Type= NA
chr11	13277831	13387266	13277831	13387266	+	ENST00000403290.5@ARNTL	ENST00000403290.5	protein_coding	13277831,13309987,13326413,13349945,13354301,13356739,13357055,13358434,13360345,13365500,13366665,13369618,13372163,13374095,13375612,13376640,13378337,13381161,13385689,13386596	13277923,13310059,13326467,13350070,13354448,13356777,13357096,13358591,13360424,13365592,13366782,13369767,13372409,13374201,13375762,13376728,13378445,13381254,13385791,13387266	Gene ID= ENSG00000133794.17 TPM= 2.34 Transcript Type= protein_coding
chr11	13388001	13463280	13388001	13463280	-	ENST00000278174.9@BTBD10	ENST00000278174.9	protein_coding	13463092,13445024,13421642,13419460,13417158,13413530,13405659,13403168,13388001	13463280,13445181,13421838,13419745,13417260,13413650,13405856,13403278,13389141	Gene ID= ENSG00000148925.10 TPM= 19.85 Transcript Type= protein_coding
chr11	13668670	13732346	13668670	13732346	+	ENST00000354817.7@FAR1	ENST00000354817.7	protein_coding	13668670,13694759,13700317,13707900,13710693,13711764,13711928,13712966,13714509,13721730,13727556,13728612	13668806,13694954,13700492,13708079,13710870,13711808,13712046,13713033,13714680,13721859,13727683,13732346	Gene ID= ENSG00000197601.12 TPM= 9.34 Transcript Type= protein_coding
chr11	13962689	14267884	13962689	14267884	+	ENST00000576479.3@SPON1	ENST00000576479.3	protein_coding	13962689,13982847,14041521,14075345,14079899,14135420,14243332,14254528,14255647,14256617,14257716,14259280,14259534,14260588,14262712,14265524	13963142,13982953,14041654,14075418,14080021,14135568,14243396,14254729,14255787,14256692,14257898,14259450,14259701,14260752,14262975,14267884	Gene ID= ENSG00000262655.3 TPM= 23.35 Transcript Type= protein_coding
chr11	14278750	14359184	14278750	14359184	-	ENST00000256196.8@RRAS2	ENST00000256196.8	protein_coding	14358763,14295768,14294760,14294471,14281602,14278750	14359184,14295855,14294862,14294579,14281720,14279424	Gene ID= ENSG00000133818.13 TPM= 11.68 Transcript Type= protein_coding
chr11	14457506	14499852	14457506	14499852	-	ENST00000249923.7@COPB1	ENST00000249923.7	protein_coding	14499609,14498838,14494210,14493642,14490565,14488492,14486367,14483032,14480990,14480759,14479569,14476919,14475785,14474495,14469336,14468681,14466282,14464911,14461186,14460208,14458532,14457506	14499852,14498985,14494439,14493811,14490679,14488584,14486504,14483151,14481097,14480905,14479714,14477015,14475945,14474615,14469563,14468860,14466426,14465030,14461331,14460297,14458687,14457883	Gene ID= ENSG00000129083.12 TPM= 18 Transcript Type= protein_coding
chr11	14457506	14499872	14457506	14499872	-	transcript1561.chr11.nic@COPB1	transcript1561.chr11.nic	protein_coding	14499742,14498838,14494210,14493642,14490565,14488492,14486367,14483032,14480990,14480759,14479569,14476919,14475785,14474495,14469336,14468681,14466282,14464911,14461186,14460208,14458532,14457506	14499872,14498985,14494439,14493811,14490679,14488584,14486504,14483151,14481097,14480905,14479714,14477015,14475945,14474615,14469563,14468860,14466426,14465030,14461331,14460297,14458687,14457883	Gene ID= ENSG00000129083.12 TPM= 33.18 Transcript Type= NA
chr11	14457550	14499895	14457550	14499895	-	ENST00000439561.6@COPB1	ENST00000439561.6	protein_coding	14499707,14498838,14494210,14493642,14490565,14488492,14486367,14483032,14480990,14480759,14479569,14476919,14475785,14474495,14469336,14468681,14466282,14464911,14461186,14460208,14458532,14457550	14499895,14498985,14494439,14493811,14490679,14488584,14486504,14483151,14481097,14480905,14479714,14477015,14475945,14474615,14469563,14468860,14466426,14465030,14461331,14460297,14458687,14457883	Gene ID= ENSG00000129083.12 TPM= 101.67 Transcript Type= protein_coding
chr11	14495457	14499030	14495457	14499030	+	transcript1564.chr11.nnic@NA	transcript1564.chr11.nnic	NA	14495457	14499030	Gene ID= novel_gene_chr11_1565 TPM= 4.67 Transcript Type= NA
chr11	14504876	14520696	14504876	14520696	-	ENST00000396394.6@PSMA1	ENST00000396394.6	protein_coding	14520297,14518997,14517880,14517642,14514403,14513817,14513570,14510872,14507656,14504876	14520696,14519041,14517981,14517745,14514491,14513887,14513699,14510951,14507766,14505248	Gene ID= ENSG00000129084.17 TPM= 103.53 Transcript Type= protein_coding
chr11	14504876	14520416	14504876	14520416	-	transcript1571.chr11.nic@PSMA1	transcript1571.chr11.nic	protein_coding	14520297,14518997,14517880,14517642,14513817,14513570,14510872,14507656,14504876	14520416,14519041,14517981,14517745,14514491,14513699,14510951,14507766,14505248	Gene ID= ENSG00000129084.17 TPM= 11.68 Transcript Type= NA
chr11	14504913	14520363	14504913	14520363	-	ENST00000530457.5@PSMA1	ENST00000530457.5	protein_coding	14519905,14518997,14517880,14517642,14514403,14513817,14513570,14510872,14507656,14504913	14520363,14519041,14517981,14517745,14514491,14513887,14513699,14510951,14507766,14505248	Gene ID= ENSG00000129084.17 TPM= 3.5 Transcript Type= protein_coding
chr11	14643805	14872044	14643805	14872044	+	transcript1572.chr11.nnic@PDE3B	transcript1572.chr11.nnic	protein_coding	14643805,14771937,14775583,14786437,14789106,14803944,14818183,14819136,14830698,14831640,14832722,14834982,14843827,14859043,14861205,14867506,14869461	14645053,14771987,14775816,14786685,14789242,14804050,14818393,14819209,14830846,14831777,14832833,14835095,14844026,14859246,14861366,14867758,14872044	Gene ID= ENSG00000152270.8 TPM= 2.34 Transcript Type= NA
chr11	14643748	14870891	14643748	14870891	+	transcript1574.chr11.nnic@PDE3B	transcript1574.chr11.nnic	protein_coding	14643748,14771937,14786437,14789106,14803944,14818183,14819136,14830698,14831640,14832722,14834982,14843827,14859043,14861205,14867506,14869461,14870390	14645053,14771987,14786685,14789242,14804050,14818393,14819209,14830846,14831777,14832833,14835095,14844026,14859246,14861366,14867758,14870322,14870891	Gene ID= ENSG00000152270.8 TPM= 2.34 Transcript Type= NA
chr11	14643723	14872044	14643723	14872044	+	ENST00000282096.8@PDE3B	ENST00000282096.8	protein_coding	14643723,14771937,14786437,14789106,14803944,14818183,14819136,14830698,14831640,14832722,14834982,14843827,14859043,14861205,14867506,14869461	14645053,14771987,14786685,14789242,14804050,14818393,14819209,14830846,14831777,14832833,14835095,14844026,14859246,14861366,14867758,14872044	Gene ID= ENSG00000152270.8 TPM= 8.17 Transcript Type= protein_coding
chr11	16738401	16756223	16738401	16756223	+	ENST00000228136.8@C11orf58	ENST00000228136.8	protein_coding	16738401,16744601,16748097,16752785,16754871	16738841,16744684,16748157,16752894,16756223	Gene ID= ENSG00000110696.9 TPM= 24.52 Transcript Type= protein_coding
chr11	16738659	16748591	16738659	16748591	+	ENST00000525256.1@C11orf58	ENST00000525256.1	protein_coding	16738659,16744601,16748097	16738841,16744684,16748591	Gene ID= ENSG00000110696.9 TPM= 1.17 Transcript Type= retained_intron
chr11	16738653	16740803	16738653	16740803	+	transcript1617.chr11.nnic@NA	transcript1617.chr11.nnic	NA	16738653	16740803	Gene ID= novel_gene_chr11_1618 TPM= 4.67 Transcript Type= NA
chr11	16787660	16795327	16787660	16795327	-	transcript1632.chr11.nic@PLEKHA7	transcript1632.chr11.nic	protein_coding	16794910,16794488,16791011,16790798,16789775,16787660	16795327,16794714,16791202,16790915,16789878,16789296	Gene ID= ENSG00000166689.15 TPM= 13.43 Transcript Type= NA
chr11	16787660	16791728	16787660	16791728	-	ENST00000332954.8@PLEKHA7	ENST00000332954.8	protein_coding	16791588,16791011,16790798,16789775,16787660	16791728,16791202,16790915,16789878,16789296	Gene ID= ENSG00000166689.15 TPM= 5.25 Transcript Type= processed_transcript
chr11	16974693	16975013	16974693	16975013	-	ENST00000459748.1@AC116533.1	ENST00000459748.1	processed_pseudogene	16974693	16975013	Gene ID= ENSG00000244398.1 TPM= 184.48 Transcript Type= processed_pseudogene
chr11	17074389	17077787	17074389	17077787	-	ENST00000525634.5@RPS13	ENST00000525634.5	protein_coding	17077619,17077429,17077168,17075454,17075097,17074389	17077787,17077477,17077246,17075623,17075197,17074466	Gene ID= ENSG00000110700.6 TPM= 567.65 Transcript Type= protein_coding
chr11	17074389	17077666	17074389	17077666	-	ENST00000228140.6@RPS13	ENST00000228140.6	protein_coding	17077619,17077429,17077168,17075454,17075097,17074389	17077666,17077477,17077246,17075623,17075163,17074466	Gene ID= ENSG00000110700.6 TPM= 2.34 Transcript Type= protein_coding
chr11	17074389	17077706	17074389	17077706	-	ENST00000526895.5@RPS13	ENST00000526895.5	protein_coding	17077619,17077429,17077168,17075454,17075097,17074389	17077706,17077473,17077246,17075623,17075197,17074466	Gene ID= ENSG00000110700.6 TPM= 11.87 Transcript Type= processed_transcript
chr11	17074393	17077668	17074393	17077668	-	ENST00000525828.1@RPS13	ENST00000525828.1	protein_coding	17077429,17077168,17075454,17075097,17074393	17077668,17077246,17075623,17075197,17074466	Gene ID= ENSG00000110700.6 TPM= 8.96 Transcript Type= retained_intron
chr11	17075119	17076569	17075119	17076569	+	transcript1640.chr11.nnic@NA	transcript1640.chr11.nnic	NA	17075119	17076569	Gene ID= novel_gene_chr11_1641 TPM= 4.67 Transcript Type= NA
chr11	17148517	17207978	17148517	17207978	-	transcript1649.chr11.nic@PIK3C2A	transcript1649.chr11.nic	protein_coding	17207848,17168677,17155526,17148517	17207978,17169806,17155629,17150655	Gene ID= ENSG00000011405.13 TPM= 2.34 Transcript Type= NA
chr11	17159405	17165806	17159405	17165806	+	transcript1653.chr11.nnic@NA	transcript1653.chr11.nnic	NA	17159405	17165806	Gene ID= novel_gene_chr11_1654 TPM= 5.84 Transcript Type= NA
chr11	17276695	17349974	17276695	17349974	+	transcript1657.chr11.nnic@NUCB2	transcript1657.chr11.nnic	protein_coding	17276695,17282789,17295324,17296104,17301744,17309572,17310825,17311193,17311872,17312028,17315386,17330127,17330902,17331412,17336960,17337348,17349345	17276828,17282943,17295467,17296211,17301870,17309675,17311010,17311283,17311930,17312120,17315475,17330297,17330983,17334480,17337083,17337534,17349974	Gene ID= ENSG00000070081.15 TPM= 3.5 Transcript Type= NA
chr11	17225009	17331523	17225009	17331523	+	transcript1659.chr11.nnic@NUCB2	transcript1659.chr11.nnic	protein_coding	17225009,17269185,17276008,17282789,17295324,17296104,17301744,17309572,17310825,17311193,17311872,17312028,17315386,17330127,17330902,17331412	17225146,17269331,17276203,17282943,17295467,17296211,17301870,17309675,17311010,17311283,17311930,17312120,17315475,17330297,17330983,17331523	Gene ID= ENSG00000070081.15 TPM= 2.34 Transcript Type= NA
chr11	17276695	17331523	17276695	17331523	+	transcript1661.chr11.nnic@NUCB2	transcript1661.chr11.nnic	protein_coding	17276695,17282789,17286634,17291240,17295324,17296104,17301744,17309572,17310825,17311193,17311872,17312028,17315386,17330127,17330902,17331412	17276828,17282943,17286717,17291365,17295467,17296211,17301870,17309675,17311010,17311283,17311930,17312120,17315475,17330297,17330983,17331523	Gene ID= ENSG00000070081.15 TPM= 2.34 Transcript Type= NA
chr11	17225009	17331523	17225009	17331523	+	transcript1662.chr11.nnic@NUCB2	transcript1662.chr11.nnic	protein_coding	17225009,17269185,17282789,17295324,17296104,17301744,17309572,17310825,17311193,17311872,17312028,17315386,17330127,17330902,17331412	17225146,17269331,17282943,17295467,17296211,17301870,17309675,17311010,17311283,17311930,17312120,17315475,17330297,17330983,17331523	Gene ID= ENSG00000070081.15 TPM= 2.34 Transcript Type= NA
chr11	17276695	17331860	17276695	17331860	+	transcript1664.chr11.nic@NUCB2	transcript1664.chr11.nic	protein_coding	17276695,17282789,17286634,17295324,17296104,17301744,17309572,17310825,17311193,17311872,17312028,17315386,17330127,17330902,17331412	17276828,17282943,17286717,17295467,17296211,17301870,17309675,17311010,17311283,17311930,17312120,17315475,17330297,17330983,17331860	Gene ID= ENSG00000070081.15 TPM= 2.34 Transcript Type= NA
chr11	17276695	17331523	17276695	17331523	+	transcript1665.chr11.nic@NUCB2	transcript1665.chr11.nic	protein_coding	17276695,17282789,17291240,17295324,17296104,17301744,17309572,17310825,17311193,17311872,17312028,17315386,17330127,17330902,17331412	17276828,17282943,17291365,17295467,17296211,17301870,17309675,17311010,17311283,17311930,17312120,17315475,17330297,17330983,17331523	Gene ID= ENSG00000070081.15 TPM= 2.34 Transcript Type= NA
chr11	17276731	17331523	17276731	17331523	+	transcript1669.chr11.nic@NUCB2	transcript1669.chr11.nic	protein_coding	17276731,17282789,17295324,17296104,17301744,17309572,17310825,17311193,17311872,17312028,17315386,17330127,17330902,17331412	17276848,17282943,17295467,17296211,17301870,17309675,17311010,17311283,17311930,17312120,17315475,17330297,17330983,17331523	Gene ID= ENSG00000070081.15 TPM= 3.5 Transcript Type= NA
chr11	17276741	17331390	17276741	17331390	+	ENST00000323688.10@NUCB2	ENST00000323688.10	protein_coding	17276741,17282789,17295324,17296104,17301744,17309572,17310825,17311193,17311872,17312028,17315386,17330127,17330902	17276828,17282943,17295467,17296211,17301870,17309675,17311010,17311283,17311930,17312120,17315475,17330297,17331390	Gene ID= ENSG00000070081.15 TPM= 1.17 Transcript Type= protein_coding
chr11	17351726	17377341	17351726	17377341	+	ENST00000338965.8@NCR3LG1	ENST00000338965.8	protein_coding	17351726,17356651,17367009,17368867,17372006	17352039,17357001,17367347,17368964,17377341	Gene ID= ENSG00000188211.8 TPM= 2.34 Transcript Type= protein_coding
chr11	17385854	17389355	17385854	17389355	-	transcript1685.chr11.nnic@NA	transcript1685.chr11.nnic	NA	17385854	17389355	Gene ID= novel_gene_chr11_1686 TPM= 10.51 Transcript Type= NA
chr11	17788048	18012934	17788048	18012934	-	transcript1699.chr11.nic@SERGEF	transcript1699.chr11.nic	protein_coding	18012851,18007941,18006591,18004441,18000497,17995796,17992931,17988597,17959470,17878208,17788048	18012934,18008076,18006746,18004535,18000557,17995909,17992993,17988755,17959636,17878244,17788413	Gene ID= ENSG00000129158.10 TPM= 8.76 Transcript Type= NA
chr11	17788048	18013162	17788048	18013162	-	ENST00000265965.9@SERGEF	ENST00000265965.9	protein_coding	18012951,18007941,18006591,18004441,18000497,17995796,17992931,17988597,17959470,17878208,17788048	18013162,18008076,18006746,18004535,18000557,17995909,17992993,17988755,17959636,17878244,17788413	Gene ID= ENSG00000129158.10 TPM= 8.76 Transcript Type= protein_coding
chr11	17788048	18012934	17788048	18012934	-	transcript1703.chr11.nic@SERGEF	transcript1703.chr11.nic	protein_coding	18012851,18007941,18006591,18004441,18000497,17995796,17992931,17988597,17878208,17788048	18012934,18008076,18006746,18004535,18000557,17995909,17992993,17988755,17878244,17788413	Gene ID= ENSG00000129158.10 TPM= 5.84 Transcript Type= NA
chr11	17788049	18013028	17788049	18013028	-	ENST00000528200.5@SERGEF	ENST00000528200.5	protein_coding	18012951,18007941,18006591,18004441,18000497,17995796,17992931,17988597,17878208,17788049	18013028,18008076,18006746,18004535,18000557,17995909,17992993,17988755,17878244,17788413	Gene ID= ENSG00000129158.10 TPM= 10.51 Transcript Type= protein_coding
chr11	17788048	18012898	17788048	18012898	-	ENST00000527494.5@SERGEF	ENST00000527494.5	protein_coding	18012851,18007941,18006591,18004441,18000497,17999494,17995796,17992931,17988597,17878208,17788048	18012898,18008076,18006746,18004535,18000557,17999572,17995909,17992993,17988755,17878244,17788413	Gene ID= ENSG00000129158.10 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr11	18080345	18106110	18080345	18106110	-	transcript1711.chr11.nic@SAAL1	transcript1711.chr11.nic	protein_coding	18105907,18103233,18096771,18092245,18090434,18090175,18089330,18087143,18086866,18081411,18080345	18106110,18103346,18096854,18092324,18090493,18090290,18089510,18087225,18087054,18081503,18080491	Gene ID= ENSG00000166788.9 TPM= 2.34 Transcript Type= NA
chr11	18080344	18106082	18080344	18106082	-	ENST00000300013.8@SAAL1	ENST00000300013.8	protein_coding	18105907,18103233,18096771,18092245,18090434,18090175,18089330,18087143,18086866,18083535,18081411,18080344	18106082,18103346,18096854,18092324,18090493,18090290,18089510,18087225,18087054,18083728,18081503,18080491	Gene ID= ENSG00000166788.9 TPM= 4.67 Transcript Type= protein_coding
chr11	18266174	18269974	18266174	18269974	+	ENST00000356524.8@SAA1	ENST00000356524.8	protein_coding	18266174,18266884,18269195,18269717	18266296,18266978,18269333,18269974	Gene ID= ENSG00000173432.10 TPM= 5.84 Transcript Type= protein_coding
chr11	18278765	18322196	18278765	18322196	-	transcript1716.chr11.nnic@HPS5	transcript1716.chr11.nnic	protein_coding	18322077,18317751,18311914,18311387,18310741,18308946,18306135,18305422,18300828,18298792,18297559,18296798,18295999,18295020,18292899,18291442,18287893,18287535,18286591,18285346,18283795,18281950,18278765	18322196,18317907,18312024,18311451,18310933,18309079,18306347,18305493,18300916,18298970,18297717,18296984,18296122,18295169,18292976,18292019,18288013,18287690,18286710,18285459,18283901,18282220,18279942	Gene ID= ENSG00000110756.17 TPM= 3.12 Transcript Type= NA
chr11	18278765	18322193	18278765	18322193	-	transcript1725.chr11.nic@HPS5	transcript1725.chr11.nic	protein_coding	18322077,18311914,18311387,18310741,18308946,18306135,18305422,18300828,18298792,18297559,18296798,18295999,18295020,18292899,18291442,18287893,18287535,18286591,18285346,18283795,18281950,18278765	18322193,18312024,18311451,18310933,18309079,18306347,18305493,18300916,18298970,18297717,18296984,18296122,18295169,18292976,18292019,18288013,18287690,18286710,18285459,18283901,18282220,18279942	Gene ID= ENSG00000110756.17 TPM= 3.12 Transcript Type= NA
chr11	18283572	18322193	18283572	18322193	-	transcript1735.chr11.nic@HPS5	transcript1735.chr11.nic	protein_coding	18321946,18317751,18311914,18311387,18310741,18308946,18306135,18305422,18300828,18298792,18297559,18296798,18295999,18295020,18292899,18291442,18287893,18287535,18286591,18285346,18283572	18322193,18317907,18312024,18311451,18310933,18309079,18306347,18305493,18300916,18298970,18297717,18296984,18296122,18295169,18292976,18292019,18288013,18287690,18286710,18285459,18283901	Gene ID= ENSG00000110756.17 TPM= 2.53 Transcript Type= NA
chr11	18278668	18322174	18278668	18322174	-	ENST00000396253.7@HPS5	ENST00000396253.7	protein_coding	18321946,18311914,18311387,18310741,18308946,18306135,18305422,18300828,18298792,18297559,18296798,18295999,18295020,18292899,18291442,18287893,18287535,18286591,18285346,18283795,18281950,18278668	18322174,18312024,18311451,18310933,18309079,18306347,18305493,18300916,18298970,18297717,18296984,18296122,18295169,18292976,18292019,18288013,18287690,18286710,18285459,18283901,18282220,18279942	Gene ID= ENSG00000110756.17 TPM= 1.37 Transcript Type= protein_coding
chr11	18279059	18322174	18279059	18322174	-	ENST00000349215.7@HPS5	ENST00000349215.7	protein_coding	18321946,18317751,18311914,18311387,18310741,18308946,18306135,18305422,18300828,18298792,18297559,18296798,18295999,18295020,18292899,18291442,18287893,18287535,18286591,18285346,18283795,18281950,18279059	18322174,18317907,18312024,18311451,18310933,18309079,18306347,18305493,18300916,18298970,18297717,18296984,18296122,18295169,18292976,18292019,18288013,18287690,18286710,18285459,18283901,18282220,18279942	Gene ID= ENSG00000110756.17 TPM= 3.7 Transcript Type= protein_coding
chr11	18322596	18367044	18322596	18367044	+	ENST00000265963.8@GTF2H1	ENST00000265963.8	protein_coding	18322596,18333060,18335754,18338109,18339564,18341261,18341528,18347588,18347832,18351881,18352329,18357952,18358525,18360615,18365783	18322740,18333228,18335946,18338274,18339657,18341410,18341607,18347715,18347919,18351969,18352446,18358042,18358640,18360707,18367044	Gene ID= ENSG00000110768.11 TPM= 8.17 Transcript Type= protein_coding
chr11	18394388	18408425	18394388	18408425	+	ENST00000422447.7@LDHA	ENST00000422447.7	protein_coding	18394388,18396819,18399431,18400837,18402840,18403694,18405449,18407117	18394636,18396968,18399548,18401010,18403013,18403811,18405572,18408425	Gene ID= ENSG00000134333.13 TPM= 189.15 Transcript Type= protein_coding
chr11	18480311	18527232	18480311	18527232	-	ENST00000251968.3@TSG101	ENST00000251968.3	protein_coding	18526775,18519519,18516099,18514678,18509542,18506857,18502486,18483870,18481630,18480311	18527232,18519603,18516164,18514841,18509665,18506923,18502577,18484072,18481869,18480635	Gene ID= ENSG00000074319.12 TPM= 108.59 Transcript Type= protein_coding
chr11	18529609	18588683	18529609	18588683	-	ENST00000396197.7@UEVLD	ENST00000396197.7	protein_coding	18588613,18578724,18575347,18570214,18566347,18564892,18558228,18546880,18544623,18536406,18534330,18529609	18588683,18578808,18575412,18570377,18566482,18565010,18558330,18547050,18544796,18536469,18534453,18532487	Gene ID= ENSG00000151116.16 TPM= 10.51 Transcript Type= protein_coding
chr11	18567493	18570180	18567493	18570180	+	transcript1775.chr11.nnic@NA	transcript1775.chr11.nnic	NA	18567493	18570180	Gene ID= novel_gene_chr11_1776 TPM= 2.34 Transcript Type= NA
chr11	18606401	18634493	18606401	18634493	-	ENST00000336349.5@SPTY2D1	ENST00000336349.5	protein_coding	18634198,18616875,18614563,18612314,18611477,18606401	18634493,18616989,18616098,18612488,18611554,18609954	Gene ID= ENSG00000179119.14 TPM= 16.35 Transcript Type= protein_coding
chr11	18698791	18704785	18698791	18704785	+	ENST00000280734.2@TMEM86A	ENST00000280734.2	protein_coding	18698791,18700933,18701573	18698907,18701197,18704785	Gene ID= ENSG00000151117.8 TPM= 1.17 Transcript Type= protein_coding
chr11	19117129	19176415	19117129	19176415	+	ENST00000446113.6@ZDHHC13	ENST00000446113.6	protein_coding	19117129,19142978,19146181,19147596,19149187,19150727,19152158,19152559,19155796,19158940,19163303,19164301,19165052,19166302,19170411,19172723,19175822	19117276,19143123,19146303,19147673,19149331,19150791,19152320,19152684,19155929,19159040,19163427,19164363,19165145,19166385,19170568,19172820,19176415	Gene ID= ENSG00000177054.13 TPM= 16.35 Transcript Type= protein_coding
chr11	19117145	19176415	19117145	19176415	+	ENST00000399351.7@ZDHHC13	ENST00000399351.7	protein_coding	19117145,19146181,19147596,19149187,19150727,19152158,19152559,19155796,19158940,19163303,19164301,19165052,19166302,19170411,19172723,19175822	19117276,19146303,19147673,19149331,19150791,19152320,19152684,19155929,19159040,19163427,19164363,19165145,19166385,19170568,19172820,19176415	Gene ID= ENSG00000177054.13 TPM= 4.67 Transcript Type= protein_coding
chr11	19345231	19351832	19345231	19351832	+	transcript1794.chr11.nnic@NAV2	transcript1794.chr11.nnic	protein_coding	19345231,19350373	19345311,19351832	Gene ID= ENSG00000166833.19 TPM= 2.34 Transcript Type= NA
chr11	19777407	19779956	19777407	19779956	-	transcript1800.chr11.nnic@NA	transcript1800.chr11.nnic	NA	19777407	19779956	Gene ID= novel_gene_chr11_1801 TPM= 2.34 Transcript Type= NA
chr11	20008738	20010545	20008738	20010545	-	transcript1802.chr11.nnic@NA	transcript1802.chr11.nnic	NA	20008738	20010545	Gene ID= novel_gene_chr11_1803 TPM= 2.34 Transcript Type= NA
chr11	20108608	20112081	20108608	20112081	-	transcript1804.chr11.nnic@NA	transcript1804.chr11.nnic	NA	20108608	20112081	Gene ID= novel_gene_chr11_1805 TPM= 5.84 Transcript Type= NA
chr11	20363743	20383782	20363743	20383782	+	ENST00000419348.6@HTATIP2	ENST00000419348.6	protein_coding	20363743,20364237,20367174,20376580,20382178,20382980	20363912,20364432,20367281,20376717,20382239,20383782	Gene ID= ENSG00000109854.13 TPM= 92.24 Transcript Type= protein_coding
chr11	20363797	20383783	20363797	20383783	+	ENST00000451739.6@HTATIP2	ENST00000451739.6	protein_coding	20363797,20367174,20376580,20382178,20382980	20364432,20367281,20376717,20382239,20383783	Gene ID= ENSG00000109854.13 TPM= 17.51 Transcript Type= protein_coding
chr11	20387530	20509253	20387530	20509253	+	ENST00000331079.10@PRMT3	ENST00000331079.10	protein_coding	20387530,20388019,20389744,20392211,20392897,20395803,20397577,20402919,20407911,20426766,20452130,20461980,20464460,20493919,20494167,20508304	20387774,20388154,20389826,20392260,20392999,20395962,20397721,20402984,20408032,20426865,20452208,20462167,20464546,20493969,20494254,20509253	Gene ID= ENSG00000185238.12 TPM= 1.17 Transcript Type= protein_coding
chr11	21912405	22123692	21912405	22123692	+	transcript1828.chr11.nnic@AC107882.1	transcript1828.chr11.nnic	lincRNA	21912405,21982966,22079541,22121498	21912656,21983078,22079702,22123692	Gene ID= ENSG00000254820.1 TPM= 2.34 Transcript Type= NA
chr11	22623061	22625826	22623061	22625826	-	transcript1829.chr11.nnic@NA	transcript1829.chr11.nnic	NA	22623061	22625826	Gene ID= novel_gene_chr11_1830 TPM= 8.17 Transcript Type= NA
chr11	22813799	22829857	22813799	22829857	-	transcript1844.chr11.nic@SVIP	transcript1844.chr11.nic	protein_coding	22829695,22827824,22827207,22820192,22813799	22829857,22827874,22827320,22823133,22814066	Gene ID= ENSG00000198168.8 TPM= 4.09 Transcript Type= NA
chr11	22818929	22829865	22818929	22829865	-	ENST00000354193.4@SVIP	ENST00000354193.4	protein_coding	22829695,22827824,22827207,22818929	22829865,22827874,22827320,22823133	Gene ID= ENSG00000198168.8 TPM= 5.25 Transcript Type= protein_coding
chr11	26994184	26996121	26994184	26996121	+	ENST00000318627.3@FIBIN	ENST00000318627.3	protein_coding	26994184	26996121	Gene ID= ENSG00000176971.3 TPM= 11.68 Transcript Type= protein_coding
chr11	27338514	27363868	27338514	27363868	-	ENST00000328697.10@CCDC34	ENST00000328697.10	protein_coding	27362836,27357403,27350332,27341392,27340696,27338514	27363868,27357541,27350439,27341550,27340837,27339035	Gene ID= ENSG00000109881.16 TPM= 5.84 Transcript Type= protein_coding
chr11	27365961	27472746	27365961	27472746	-	ENST00000379214.8@LGR4	ENST00000379214.8	protein_coding	27472118,27412789,27392447,27391094,27385253,27384336,27382188,27380895,27380640,27380271,27378697,27377158,27376299,27373975,27373551,27372283,27371615,27365961	27472746,27412860,27392518,27391165,27385468,27384407,27382256,27380966,27380711,27380339,27378768,27377223,27376370,27374046,27373676,27372398,27371698,27369143	Gene ID= ENSG00000205213.13 TPM= 5.84 Transcript Type= protein_coding
chr11	27494898	27506767	27494898	27506767	-	transcript1872.chr11.nnic@LIN7C	transcript1872.chr11.nnic	protein_coding	27506716,27506317,27501802,27501495,27499359,27494898	27506767,27506455,27501920,27501566,27499568,27498804	Gene ID= ENSG00000148943.11 TPM= 4.67 Transcript Type= NA
chr11	27494418	27506790	27494418	27506790	-	transcript1878.chr11.nic@LIN7C	transcript1878.chr11.nic	protein_coding	27506716,27501802,27501495,27494418	27506790,27501920,27501566,27499568	Gene ID= ENSG00000148943.11 TPM= 3.89 Transcript Type= NA
chr11	27494576	27506773	27494576	27506773	-	ENST00000278193.6@LIN7C	ENST00000278193.6	protein_coding	27506716,27501802,27501495,27499359,27494576	27506773,27501920,27501566,27499568,27498804	Gene ID= ENSG00000148943.11 TPM= 68.89 Transcript Type= protein_coding
chr11	27654893	27700488	27654893	27700488	-	ENST00000356660.8@BDNF	ENST00000356660.8	protein_coding	27700164,27654893	27700488,27658585	Gene ID= ENSG00000176697.18 TPM= 4.67 Transcript Type= protein_coding
chr11	28020620	28108308	28020620	28108308	-	ENST00000263181.6@KIF18A	ENST00000263181.6	protein_coding	28108064,28097623,28094643,28091409,28090617,28088524,28084632,28083169,28082856,28077007,28069259,28062395,28058926,28036217,28035387,28023741,28020620	28108308,28097993,28094800,28091513,28090727,28088721,28084808,28083243,28082968,28077169,28069423,28062516,28059161,28036664,28035494,28023850,28021282	Gene ID= ENSG00000121621.6 TPM= 2.34 Transcript Type= protein_coding
chr11	28108354	28333507	28108354	28333507	+	ENST00000407364.7@METTL15	ENST00000407364.7	protein_coding	28108354,28110166,28113318,28211062,28290206,28296753,28330396	28108452,28110401,28113604,28211198,28290397,28296931,28333507	Gene ID= ENSG00000169519.20 TPM= 12.84 Transcript Type= protein_coding
chr11	30009741	30017023	30009741	30017023	-	ENST00000328224.6@KCNA4	ENST00000328224.6	protein_coding	30016572,30009741	30017023,30013460	Gene ID= ENSG00000182255.6 TPM= 3.5 Transcript Type= protein_coding
chr11	30323051	30338227	30323051	30338227	+	ENST00000282032.3@ARL14EP	ENST00000282032.3	protein_coding	30323051,30330886,30332866,30336567	30323202,30331374,30332993,30338227	Gene ID= ENSG00000152219.4 TPM= 23.35 Transcript Type= protein_coding
chr11	30323096	30338453	30323096	30338453	+	transcript1902.chr11.nic@ARL14EP	transcript1902.chr11.nic	protein_coding	30323096,30330886,30332866,30336567	30323202,30331800,30332993,30338453	Gene ID= ENSG00000152219.4 TPM= 2.34 Transcript Type= NA
chr11	30884035	30888452	30884035	30888452	-	transcript1903.chr11.nnic@NA	transcript1903.chr11.nnic	NA	30884035	30888452	Gene ID= novel_gene_chr11_1904 TPM= 2.34 Transcript Type= NA
chr11	31369840	31431849	31369840	31431849	+	ENST00000465995.5@DNAJC24	ENST00000465995.5	protein_coding	31369840,31370716,31414811,31426287,31430271	31369912,31370859,31414949,31426355,31431849	Gene ID= ENSG00000170946.14 TPM= 1.17 Transcript Type= protein_coding
chr11	31431115	31432834	31431115	31432834	+	transcript1911.chr11.nnic@NA	transcript1911.chr11.nnic	NA	31431115	31432834	Gene ID= novel_gene_chr11_1912 TPM= 2.34 Transcript Type= NA
chr11	31509700	31790328	31509700	31790328	+	ENST00000640961.1@ELP4	ENST00000640961.1	protein_coding	31509700,31520056,31539662,31594770,31603768,31627110,31632217,31647741,31650115,31783393	31510007,31520091,31539783,31594901,31603907,31627194,31632405,31647849,31650221,31790328	Gene ID= ENSG00000109911.18 TPM= 4.67 Transcript Type= protein_coding
chr11	32583798	32602473	32583798	32602473	+	transcript1921.chr11.nic@EIF3M	transcript1921.chr11.nic	protein_coding	32583798,32587012,32588594,32589012,32589547,32593866,32595966,32600689,32601762,32602279	32583929,32587144,32588732,32589135,32589641,32595013,32596047,32600832,32601822,32602473	Gene ID= ENSG00000149100.12 TPM= 7.01 Transcript Type= NA
chr11	32583825	32606262	32583825	32606262	+	ENST00000531120.5@EIF3M	ENST00000531120.5	protein_coding	32583825,32587012,32588594,32589012,32589547,32593866,32594914,32595966,32600689,32601762,32602279	32583929,32587144,32588732,32589135,32589641,32593949,32595013,32596047,32600832,32601822,32606262	Gene ID= ENSG00000149100.12 TPM= 3.5 Transcript Type= protein_coding
chr11	32829924	32856849	32829924	32856849	+	transcript1932.chr11.nnic@PRRG4	transcript1932.chr11.nnic	protein_coding	32829924,32830508,32836658,32838882,32840107,32853296,32854528	32830173,32830632,32836821,32838930,32840239,32853463,32856849	Gene ID= ENSG00000135378.3 TPM= 2.34 Transcript Type= NA
chr11	33015864	33033582	33015864	33033582	+	ENST00000241051.7@DEPDC7	ENST00000241051.7	protein_coding	33015864,33025659,33027686,33028603,33031378,33032336,33032668,33032889,33033262	33016028,33026049,33027813,33028792,33031589,33032478,33032793,33032967,33033582	Gene ID= ENSG00000121690.10 TPM= 1.17 Transcript Type= protein_coding
chr11	33039417	33073563	33039417	33073563	+	ENST00000334274.8@TCP11L1	ENST00000334274.8	protein_coding	33039417,33043750,33054593,33057115,33057919,33058959,33061530,33065830,33068687,33072474	33039792,33043936,33054725,33057235,33058139,33059095,33061726,33066011,33068859,33073563	Gene ID= ENSG00000176148.15 TPM= 1.17 Transcript Type= protein_coding
chr11	33140966	33161531	33140966	33161531	-	ENST00000438862.6@CSTF3	ENST00000438862.6	protein_coding	33161299,33141885,33140966	33161531,33141986,33141762	Gene ID= ENSG00000176102.11 TPM= 2.34 Transcript Type= protein_coding
chr11	33084584	33161465	33084584	33161465	-	ENST00000323959.8@CSTF3	ENST00000323959.8	protein_coding	33161299,33141885,33141667,33108386,33107903,33105998,33105883,33105567,33103107,33102177,33099608,33099034,33098690,33096835,33096306,33092271,33090532,33086988,33085895,33085713,33084584	33161465,33141986,33141762,33108418,33108000,33106064,33105917,33105693,33103184,33102339,33099717,33099150,33098764,33096978,33096408,33092340,33090727,33087141,33085989,33085773,33085289	Gene ID= ENSG00000176102.11 TPM= 10.51 Transcript Type= protein_coding
chr11	33708700	33736439	33708700	33736439	-	ENST00000395850.7@CD59	ENST00000395850.7	protein_coding	33736382,33722379,33717370,33708700	33736439,33722463,33717471,33710343	Gene ID= ENSG00000085063.14 TPM= 128.44 Transcript Type= protein_coding
chr11	33708833	33736408	33708833	33736408	-	ENST00000533403.5@CD59	ENST00000533403.5	protein_coding	33736382,33722379,33717370,33711384,33708833	33736408,33722463,33717471,33711505,33710343	Gene ID= ENSG00000085063.14 TPM= 4.67 Transcript Type= protein_coding
chr11	33708865	33736445	33708865	33736445	-	ENST00000351554.7@CD59	ENST00000351554.7	protein_coding	33736382,33731424,33722379,33717370,33708865	33736445,33731468,33722463,33717471,33710343	Gene ID= ENSG00000085063.14 TPM= 107.42 Transcript Type= protein_coding
chr11	33703195	33706570	33703195	33706570	+	transcript1976.chr11.nnic@NA	transcript1976.chr11.nnic	NA	33703195	33706570	Gene ID= novel_gene_chr11_1977 TPM= 131.35 Transcript Type= NA
chr11	33705281	33708471	33705281	33708471	-	transcript1980.chr11.nnic@NA	transcript1980.chr11.nnic	NA	33705281	33708471	Gene ID= novel_gene_chr11_1981 TPM= 76.48 Transcript Type= NA
chr11	33731152	33735925	33731152	33735925	+	transcript1978.chr11.nnic@NA	transcript1978.chr11.nnic	NA	33731152	33735925	Gene ID= novel_gene_chr11_1979 TPM= 8.17 Transcript Type= NA
chr11	33744686	33774526	33744686	33774526	-	transcript1992.chr11.nic@FBXO3	transcript1992.chr11.nic	protein_coding	33774394,33770741,33768851,33758487,33755771,33754455,33751523,33750539,33748777,33747130,33744686	33774526,33770830,33769014,33758601,33755975,33754500,33751607,33750661,33748892,33747320,33746059	Gene ID= ENSG00000110429.13 TPM= 3.5 Transcript Type= NA
chr11	33746743	33774543	33746743	33774543	-	ENST00000448981.6@FBXO3	ENST00000448981.6	protein_coding	33774394,33770741,33768851,33758487,33755771,33754455,33751523,33750539,33748777,33746743	33774543,33770830,33769014,33758601,33755975,33754500,33751607,33750661,33748892,33747320	Gene ID= ENSG00000110429.13 TPM= 1.17 Transcript Type= protein_coding
chr11	33740946	33774516	33740946	33774516	-	ENST00000265651.7@FBXO3	ENST00000265651.7	protein_coding	33774394,33770741,33768851,33758487,33755771,33754455,33751523,33750539,33748777,33747130,33740946	33774516,33770830,33769014,33758601,33755975,33754500,33751607,33750661,33748892,33747320,33742084	Gene ID= ENSG00000110429.13 TPM= 57.21 Transcript Type= protein_coding
chr11	33740965	33774518	33740965	33774518	-	ENST00000530401.5@FBXO3	ENST00000530401.5	protein_coding	33774394,33770741,33768851,33758487,33755771,33754455,33751523,33750539,33748777,33740965	33774518,33770815,33769014,33758601,33755975,33754500,33751607,33750661,33748892,33747320	Gene ID= ENSG00000110429.13 TPM= 3.5 Transcript Type= protein_coding
chr11	33858576	33870589	33858576	33870589	-	transcript2000.chr11.nic@LMO2	transcript2000.chr11.nic	protein_coding	33870345,33869825,33869346,33864602,33858576	33870589,33869987,33869586,33864817,33859575	Gene ID= ENSG00000135363.11 TPM= 52.64 Transcript Type= NA
chr11	33858576	33892289	33858576	33892289	-	ENST00000257818.2@LMO2	ENST00000257818.2	protein_coding	33891795,33881824,33869710,33869346,33864602,33858576	33892289,33881887,33869987,33869586,33864817,33859575	Gene ID= ENSG00000135363.11 TPM= 43.29 Transcript Type= protein_coding
chr11	33858576	33869816	33858576	33869816	-	ENST00000395833.7@LMO2	ENST00000395833.7	protein_coding	33869346,33864602,33858576	33869816,33864817,33859575	Gene ID= ENSG00000135363.11 TPM= 97 Transcript Type= protein_coding
chr11	33858577	33861057	33858577	33861057	-	transcript2006.chr11.nnic@NA	transcript2006.chr11.nnic	NA	33858577	33861057	Gene ID= novel_gene_chr11_2007 TPM= 4.38 Transcript Type= NA
chr11	34051683	34101156	34051683	34101156	+	ENST00000341394.8@CAPRIN1	ENST00000341394.8	protein_coding	34051683,34052421,34071726,34071901,34076236,34076560,34079628,34082825,34082955,34086064,34086305,34089395,34090179,34090529,34091906,34096479,34097196,34097698,34099303	34051871,34052636,34071788,34071987,34076474,34076642,34079765,34082877,34083041,34086219,34086413,34089456,34090289,34090678,34092056,34096673,34097296,34097761,34101156	Gene ID= ENSG00000135387.20 TPM= 135.09 Transcript Type= protein_coding
chr11	34051732	34099054	34051732	34099054	+	ENST00000389645.7@CAPRIN1	ENST00000389645.7	protein_coding	34051732,34052421,34071726,34071901,34076236,34076560,34079628,34082825,34082955,34086064,34086305,34089395,34090179,34090529,34091906,34096479,34097196,34097698	34051871,34052636,34071788,34071987,34076474,34076642,34079765,34082877,34083041,34086219,34086413,34089456,34090289,34090678,34092056,34096673,34097296,34099054	Gene ID= ENSG00000135387.20 TPM= 9.57 Transcript Type= protein_coding
chr11	34052210	34100464	34052210	34100464	+	ENST00000532820.5@CAPRIN1	ENST00000532820.5	protein_coding	34052210,34071726,34071901,34076236,34076560,34079628,34082825,34082955,34086064,34086305,34089395,34090179,34090529,34091906,34096479,34097196,34097698,34099303	34052636,34071788,34071987,34076474,34076642,34079765,34082877,34083041,34086219,34086413,34089456,34090289,34090678,34092056,34096673,34097296,34097761,34100464	Gene ID= ENSG00000135387.20 TPM= 14.24 Transcript Type= protein_coding
chr11	34105602	34146910	34105602	34146910	+	ENST00000257829.7@NAT10	ENST00000257829.7	protein_coding	34105602,34108211,34108742,34112052,34113716,34115823,34118180,34118396,34122459,34123762,34124302,34127463,34130813,34131381,34132125,34133026,34134319,34134512,34135175,34136642,34136978,34139191,34139385,34140400,34141089,34141719,34142275,34143445,34146084	34105792,34108333,34108833,34112223,34113838,34115884,34118294,34118503,34122592,34123855,34124400,34127599,34130937,34131531,34132221,34133142,34134420,34134586,34135291,34136775,34137026,34139287,34139495,34140572,34141208,34141817,34142348,34143528,34146910	Gene ID= ENSG00000135372.8 TPM= 33.86 Transcript Type= protein_coding
chr11	34150988	34358008	34150988	34358008	-	ENST00000435224.2@ABTB2	ENST00000435224.2	protein_coding	34356701,34204544,34197325,34173155,34170906,34167903,34167259,34165260,34164686,34162576,34160903,34160248,34159906,34159296,34154701,34154265,34150988	34358008,34204690,34197538,34173307,34171071,34167992,34167360,34165356,34164821,34162805,34161081,34160353,34160008,34159386,34154769,34154378,34152584	Gene ID= ENSG00000166016.5 TPM= 3.5 Transcript Type= protein_coding
chr11	34438925	34472062	34438925	34472062	+	ENST00000241052.4@CAT	ENST00000241052.4	protein_coding	34438925,34449192,34450988,34452077,34453090,34453801,34456011,34456665,34461251,34464105,34468288,34470958,34471368	34439079,34449363,34451098,34452207,34453194,34453926,34456202,34456817,34461389,34464235,34468395,34471041,34472062	Gene ID= ENSG00000121691.4 TPM= 477.55 Transcript Type= protein_coding
chr11	34478796	34511799	34478796	34511799	-	ENST00000312319.6@ELF5	ENST00000312319.6	protein_coding	34511544,34505629,34493479,34490009,34482431,34480772,34478796	34511799,34505753,34493712,34490059,34482499,34480967,34480314	Gene ID= ENSG00000135374.9 TPM= 2.34 Transcript Type= protein_coding
chr11	34478793	34513800	34478793	34513800	-	ENST00000257832.6@ELF5	ENST00000257832.6	protein_coding	34513677,34505629,34493479,34490009,34482431,34480772,34478793	34513800,34505753,34493712,34490059,34482499,34480967,34480314	Gene ID= ENSG00000135374.9 TPM= 4.67 Transcript Type= protein_coding
chr11	34882370	34916411	34882370	34916411	-	transcript2054.chr11.nnic@APIP	transcript2054.chr11.nnic	protein_coding	34916228,34896761,34895010,34890504,34888752,34888293,34883337,34882370	34916411,34896855,34895110,34890552,34888869,34888428,34883504,34882816	Gene ID= ENSG00000149089.12 TPM= 3.5 Transcript Type= NA
chr11	34882295	34916499	34882295	34916499	-	ENST00000395787.3@APIP	ENST00000395787.3	protein_coding	34916228,34895010,34890504,34888752,34888293,34883337,34882295	34916499,34895110,34890552,34888869,34888428,34883504,34882816	Gene ID= ENSG00000149089.12 TPM= 3.5 Transcript Type= protein_coding
chr11	34882370	34916351	34882370	34916351	-	ENST00000527830.1@APIP	ENST00000527830.1	protein_coding	34916228,34890504,34888752,34888293,34883337,34882370	34916351,34890552,34888869,34888428,34883504,34882816	Gene ID= ENSG00000149089.12 TPM= 4.67 Transcript Type= processed_transcript
chr11	34916572	34995971	34916572	34995971	+	ENST00000227868.8@PDHX	ENST00000227868.8	protein_coding	34916572,34931404,34947506,34957384,34960420,34966640,34970139,34978124,34984570,34992315,34994914	34916815,34931484,34947606,34957583,34960518,34966814,34970286,34978182,34984728,34992379,34995971	Gene ID= ENSG00000110435.11 TPM= 38.53 Transcript Type= protein_coding
chr11	35139019	35232402	35139019	35232402	+	transcript2076.chr11.nic@CD44	transcript2076.chr11.nic	protein_coding	35139019,35176575,35180274,35186832,35189835,35198121,35201082,35201668,35204512,35206112,35208105,35209965,35211246,35214852,35219316,35221654,35229129	35139370,35176740,35180407,35186900,35190065,35198246,35201195,35201787,35204640,35206243,35208206,35210054,35211449,35214914,35219387,35221732,35232402	Gene ID= ENSG00000026508.17 TPM= 21.6 Transcript Type= NA
chr11	35139014	35232402	35139014	35232402	+	transcript2093.chr11.nic@CD44	transcript2093.chr11.nic	protein_coding	35139014,35176575,35180274,35186832,35189835,35204512,35206112,35208105,35209965,35211246,35214852,35219316,35221654,35229129	35139370,35176740,35180407,35186900,35190065,35204640,35206243,35208206,35210054,35211449,35214914,35219387,35221732,35232402	Gene ID= ENSG00000026508.17 TPM= 20.23 Transcript Type= NA
chr11	35138870	35232402	35138870	35232402	+	ENST00000263398.10@CD44	ENST00000263398.10	protein_coding	35138870,35176575,35180274,35186832,35189835,35214852,35219316,35221654,35229129	35139370,35176740,35180407,35186900,35190065,35214914,35219387,35221732,35232402	Gene ID= ENSG00000026508.17 TPM= 295.4 Transcript Type= protein_coding
chr11	35139170	35229468	35139170	35229468	+	ENST00000415148.6@CD44	ENST00000415148.6	protein_coding	35139170,35176575,35180274,35186832,35189835,35198121,35201082,35201671,35204512,35206112,35208105,35209965,35211246,35214852,35219316,35221654,35229129	35139370,35176740,35180407,35186900,35190065,35198246,35201195,35201787,35204640,35206243,35208206,35210054,35211449,35214914,35219387,35221732,35229468	Gene ID= ENSG00000026508.17 TPM= 10.51 Transcript Type= protein_coding
chr11	35139188	35230027	35139188	35230027	+	ENST00000433892.6@CD44	ENST00000433892.6	protein_coding	35139188,35176575,35180274,35186832,35189835,35208105,35209965,35211246,35214852,35219316,35221654,35229129	35139370,35176740,35180407,35186900,35190065,35208206,35210054,35211449,35214914,35219387,35221732,35230027	Gene ID= ENSG00000026508.17 TPM= 20.23 Transcript Type= protein_coding
chr11	35192792	35197361	35192792	35197361	-	transcript2135.chr11.nnic@NA	transcript2135.chr11.nnic	NA	35192792	35197361	Gene ID= novel_gene_chr11_2136 TPM= 17.51 Transcript Type= NA
chr11	35431823	35526031	35431823	35526031	-	ENST00000619888.4@PAMR1	ENST00000619888.4	protein_coding	35525513,35494096,35492045,35474630,35470601,35468001,35441481,35439627,35435903,35434512,35431823	35526031,35494272,35492173,35474744,35470818,35468108,35441693,35439693,35436135,35434804,35432892	Gene ID= ENSG00000149090.11 TPM= 23.35 Transcript Type= protein_coding
chr11	35618419	35620868	35618419	35620868	+	ENST00000317811.5@FJX1	ENST00000317811.5	protein_coding	35618419	35620868	Gene ID= ENSG00000179431.6 TPM= 32.69 Transcript Type= protein_coding
chr11	35662739	35808225	35662739	35808225	+	transcript2156.chr11.nnic@TRIM44	transcript2156.chr11.nnic	protein_coding	35662739,35685259,35735426,35806358	35663780,35685336,35735445,35808225	Gene ID= ENSG00000166326.6 TPM= 8.76 Transcript Type= NA
chr11	35807929	35811052	35807929	35811052	+	transcript2159.chr11.nnic@NA	transcript2159.chr11.nnic	NA	35807929	35811052	Gene ID= novel_gene_chr11_2160 TPM= 7.01 Transcript Type= NA
chr11	35944078	36232136	35944078	36232136	+	ENST00000315571.5@LDLRAD3	ENST00000315571.5	protein_coding	35944078,36036103,36081653,36098327,36227085,36229160	35944144,36036249,36081778,36098461,36227430,36232136	Gene ID= ENSG00000179241.12 TPM= 11.68 Transcript Type= protein_coding
chr11	36272292	36289429	36272292	36289429	-	ENST00000263401.9@COMMD9	ENST00000263401.9	protein_coding	36289362,36280712,36278477,36277089,36276137,36272292	36289429,36280837,36278616,36277123,36276240,36274772	Gene ID= ENSG00000110442.11 TPM= 4.67 Transcript Type= protein_coding
chr11	36376372	36465204	36376372	36465204	+	transcript2168.chr11.nic@PRR5L	transcript2168.chr11.nic	protein_coding	36376372,36393846,36400997,36403298,36419255,36431853,36437385,36446300,36451209,36462342	36376704,36394011,36401285,36403378,36419303,36431910,36437476,36446440,36451335,36465204	Gene ID= ENSG00000135362.13 TPM= 5.25 Transcript Type= NA
chr11	36376376	36465204	36376376	36465204	+	transcript2173.chr11.nic@PRR5L	transcript2173.chr11.nic	protein_coding	36376376,36400997,36403298,36419255,36431853,36437385,36446300,36451209,36462342	36376704,36401285,36403378,36419303,36431910,36437476,36446440,36451335,36465204	Gene ID= ENSG00000135362.13 TPM= 6.42 Transcript Type= NA
chr11	36509918	36511045	36509918	36511045	+	transcript2185.chr11.nnic@NA	transcript2185.chr11.nnic	NA	36509918	36511045	Gene ID= novel_gene_chr11_2186 TPM= 2.34 Transcript Type= NA
chr11	36594501	36659268	36594501	36659268	+	ENST00000334307.9@C11orf74	ENST00000334307.9	protein_coding	36594501,36610081,36633284,36636051,36648016,36659019	36594592,36610239,36633438,36636117,36648155,36659268	Gene ID= ENSG00000166352.15 TPM= 8.17 Transcript Type= protein_coding
chr11	36594513	36659272	36594513	36659272	+	ENST00000347206.8@C11orf74	ENST00000347206.8	protein_coding	36594513,36610081,36648016,36659019	36594592,36610239,36648155,36659272	Gene ID= ENSG00000166352.15 TPM= 1.17 Transcript Type= protein_coding
chr11	40114241	40293130	40114241	40293130	-	ENST00000527150.5@LRRC4C	ENST00000527150.5	protein_coding	40292193,40140801,40114241	40293130,40140853,40116334	Gene ID= ENSG00000148948.7 TPM= 1.17 Transcript Type= protein_coding
chr11	43312003	43344529	43312003	43344529	+	ENST00000378852.7@API5	ENST00000378852.7	protein_coding	43312003,43318640,43320821,43321411,43321985,43323430,43326507,43327789,43328712,43329965,43330508,43335278,43335858,43342433	43312196,43318801,43320914,43321476,43322136,43323636,43326611,43327878,43328893,43330058,43330564,43335354,43335994,43344529	Gene ID= ENSG00000166181.12 TPM= 209 Transcript Type= protein_coding
chr11	43358921	43494933	43358921	43494933	+	transcript2220.chr11.nic@TTC17	transcript2220.chr11.nic	protein_coding	43358921,43379233,43389652,43391465,43391821,43396709,43397347,43397974,43399888,43401446,43403998,43405514,43405786,43407138,43407353,43414590,43436164,43443325,43444056,43448002,43450082,43451182,43490239,43492020,43493773	43359113,43379322,43389821,43391576,43391952,43396818,43397491,43398113,43400048,43401558,43404144,43405629,43405951,43407215,43407577,43414776,43436334,43443584,43444209,43448122,43450241,43451265,43490358,43492163,43494933	Gene ID= ENSG00000052841.14 TPM= 69.39 Transcript Type= NA
chr11	43358921	43494933	43358921	43494933	+	transcript2223.chr11.nnic@TTC17	transcript2223.chr11.nnic	protein_coding	43358921,43379233,43389652,43391465,43391821,43396709,43397347,43398025,43399888,43401446,43403998,43405514,43405786,43407138,43407353,43414590,43436164,43443325,43444056,43448002,43450082,43451182,43490239,43492020,43493773	43359113,43379322,43389821,43391576,43391952,43396818,43397491,43398113,43400048,43401558,43404144,43405629,43405951,43407215,43407577,43414776,43436334,43443584,43444209,43448122,43450241,43451265,43490358,43492163,43494933	Gene ID= ENSG00000052841.14 TPM= 12.06 Transcript Type= NA
chr11	43358921	43446544	43358921	43446544	+	transcript2232.chr11.nnic@TTC17	transcript2232.chr11.nnic	protein_coding	43358921,43379233,43389652,43391465,43391821,43396709,43397347,43398025,43399888,43401446,43403998,43405514,43405786,43407138,43407353,43414590,43436164,43443325,43444056,43445931	43359113,43379322,43389821,43391576,43391952,43396818,43397491,43398113,43400048,43401558,43404144,43405629,43405951,43407215,43407577,43414776,43436334,43443584,43444209,43446544	Gene ID= ENSG00000052841.14 TPM= 7.01 Transcript Type= NA
chr11	43358932	43446719	43358932	43446719	+	ENST00000299240.10@TTC17	ENST00000299240.10	protein_coding	43358932,43379233,43389652,43391465,43391821,43396709,43397347,43397974,43399888,43401446,43403998,43405514,43405786,43407138,43407353,43414590,43436164,43443325,43444056,43445931	43359113,43379322,43389821,43391576,43391952,43396818,43397491,43398113,43400048,43401558,43404144,43405629,43405951,43407215,43407577,43414776,43436334,43443584,43444209,43446719	Gene ID= ENSG00000052841.14 TPM= 12.38 Transcript Type= protein_coding
chr11	43358941	43494933	43358941	43494933	+	ENST00000039989.8@TTC17	ENST00000039989.8	protein_coding	43358941,43379233,43389652,43391465,43391821,43396709,43397347,43397974,43399888,43401446,43403998,43405514,43405786,43407138,43407353,43414590,43443325,43444056,43448002,43450082,43451182,43490239,43492020,43493773	43359113,43379322,43389821,43391576,43391952,43396818,43397491,43398113,43400048,43401558,43404144,43405629,43405951,43407215,43407577,43414776,43443584,43444209,43448122,43450241,43451265,43490358,43492163,43494933	Gene ID= ENSG00000052841.14 TPM= 8.09 Transcript Type= protein_coding
chr11	43680558	43856610	43680558	43856610	+	ENST00000278353.9@HSD17B12	ENST00000278353.9	protein_coding	43680558,43750911,43754046,43798320,43815437,43816347,43830976,43838317,43839999,43854715,43855144	43680987,43750957,43754121,43798427,43815501,43816391,43831010,43838398,43840064,43854864,43856610	Gene ID= ENSG00000149084.12 TPM= 212.5 Transcript Type= protein_coding
chr11	43690406	43693439	43690406	43693439	-	transcript2255.chr11.nnic@NA	transcript2255.chr11.nnic	NA	43690406	43693439	Gene ID= novel_gene_chr11_2256 TPM= 4.67 Transcript Type= NA
chr11	43856418	43859787	43856418	43859787	-	transcript2257.chr11.nnic@NA	transcript2257.chr11.nnic	NA	43856418	43859787	Gene ID= novel_gene_chr11_2258 TPM= 3.5 Transcript Type= NA
chr11	43880848	43920266	43880848	43920266	+	transcript2261.chr11.nic@ALKBH3	transcript2261.chr11.nic	protein_coding	43880848,43882583,43883085,43883983,43886606,43889725,43892041,43901516,43919038,43919918	43881446,43882731,43883188,43884017,43886653,43889828,43892129,43901725,43919136,43920266	Gene ID= ENSG00000166199.12 TPM= 4.67 Transcript Type= NA
chr11	43942590	43943883	43942590	43943883	+	ENST00000617612.1@C11orf96	ENST00000617612.1	protein_coding	43942590	43943883	Gene ID= ENSG00000187479.5 TPM= 161.13 Transcript Type= protein_coding
chr11	44095549	44244932	44095549	44244932	+	ENST00000533608.5@EXT2	ENST00000533608.5	protein_coding	44095549,44107683,44109194,44114185,44124789,44126816,44130045,44171611,44197829,44206793,44232353,44234115,44236293,44244149	44095852,44108248,44109283,44114301,44124984,44126955,44130138,44171742,44198018,44206959,44232496,44234243,44236375,44244932	Gene ID= ENSG00000151348.13 TPM= 158.79 Transcript Type= protein_coding
chr11	44247407	44251975	44247407	44251975	+	transcript2298.chr11.nnic@NA	transcript2298.chr11.nnic	NA	44247407	44251975	Gene ID= novel_gene_chr11_2299 TPM= 2.34 Transcript Type= NA
chr11	44565591	44620363	44565591	44620363	+	ENST00000227155.8@CD82	ENST00000227155.8	protein_coding	44565591,44587475,44594643,44600158,44605058,44605355,44615272,44618162,44618640,44619049	44565736,44587556,44594725,44600230,44605182,44605429,44615373,44618365,44618723,44620363	Gene ID= ENSG00000085117.11 TPM= 56.04 Transcript Type= protein_coding
chr11	44932348	44950886	44932348	44950886	-	transcript2324.chr11.nic@TP53I11	transcript2324.chr11.nic	protein_coding	44950677,44939166,44938207,44937555,44937304,44936803,44935561,44932348	44950886,44939281,44938366,44937613,44937352,44936899,44935662,44935017	Gene ID= ENSG00000175274.18 TPM= 68.5 Transcript Type= NA
chr11	44932348	44951306	44932348	44951306	-	ENST00000308212.9@TP53I11	ENST00000308212.9	protein_coding	44950877,44939166,44938207,44937555,44937304,44936803,44935561,44932348	44951306,44939281,44938366,44937613,44937352,44936899,44935662,44935017	Gene ID= ENSG00000175274.18 TPM= 65 Transcript Type= protein_coding
chr11	44932348	44951306	44932348	44951306	-	ENST00000616990.4@TP53I11	ENST00000616990.4	protein_coding	44950877,44938207,44937555,44937304,44936803,44935561,44932348	44951306,44938366,44937613,44937352,44936899,44935662,44935017	Gene ID= ENSG00000175274.18 TPM= 65 Transcript Type= protein_coding
chr11	45146498	45214713	45146498	45214713	+	transcript2334.chr11.nic@PRDM11	transcript2334.chr11.nic	protein_coding	45146498,45181761,45182246,45182861,45204711,45208874,45212469	45146877,45181885,45182349,45183123,45204778,45209295,45214713	Gene ID= ENSG00000019485.13 TPM= 2.92 Transcript Type= NA
chr11	45180755	45214713	45180755	45214713	+	transcript2337.chr11.nnic@PRDM11	transcript2337.chr11.nnic	protein_coding	45180755,45181766,45182246,45182861,45204711,45208874,45212469	45181167,45181885,45182349,45183123,45204778,45209295,45214713	Gene ID= ENSG00000019485.13 TPM= 2.92 Transcript Type= NA
chr11	45648877	45653036	45648877	45653036	-	transcript2342.chr11.nic@CHST1	transcript2342.chr11.nic	protein_coding	45652521,45651993,45648877	45653036,45652090,45650965	Gene ID= ENSG00000175264.7 TPM= 2.34 Transcript Type= NA
chr11	45648877	45665622	45648877	45665622	-	ENST00000308064.6@CHST1	ENST00000308064.6	protein_coding	45665178,45652521,45651993,45648877	45665622,45652606,45652090,45650965	Gene ID= ENSG00000175264.7 TPM= 18.68 Transcript Type= protein_coding
chr11	45771432	45772358	45771432	45772358	+	ENST00000378779.4@DKFZp779M0652	ENST00000378779.4	lincRNA	45771432,45771993	45771714,45772358	Gene ID= ENSG00000205106.4 TPM= 1.17 Transcript Type= lincRNA
chr11	45804049	45813015	45804049	45813015	+	transcript2346.chr11.nic@SLC35C1	transcript2346.chr11.nic	protein_coding	45804049,45805810,45810776	45804420,45806336,45813015	Gene ID= ENSG00000181830.8 TPM= 7.01 Transcript Type= NA
chr11	45804072	45811558	45804072	45811558	+	ENST00000442528.2@SLC35C1	ENST00000442528.2	protein_coding	45804072,45805810,45810776	45804517,45806336,45811558	Gene ID= ENSG00000181830.8 TPM= 15.76 Transcript Type= protein_coding
chr11	45804431	45813015	45804431	45813015	+	transcript2349.chr11.nnic@SLC35C1	transcript2349.chr11.nnic	protein_coding	45804431,45805261,45810776	45804731,45806336,45813015	Gene ID= ENSG00000181830.8 TPM= 2.34 Transcript Type= NA
chr11	45804406	45813015	45804406	45813015	+	ENST00000314134.3@SLC35C1	ENST00000314134.3	protein_coding	45804406,45810776	45806336,45813015	Gene ID= ENSG00000181830.8 TPM= 70.06 Transcript Type= protein_coding
chr11	45847455	45883241	45847455	45883241	+	transcript2356.chr11.nnic@CRY2	transcript2356.chr11.nnic	protein_coding	45847455,45855982,45858731,45860848,45862060,45867612,45869506,45870053,45870330,45870842,45872092,45880914,45882149	45847705,45856090,45858873,45861032,45862148,45867752,45869817,45870204,45870532,45870934,45872233,45882066,45883241	Gene ID= ENSG00000121671.11 TPM= 12.84 Transcript Type= NA
chr11	45851031	45857127	45851031	45857127	-	transcript2365.chr11.nnic@NA	transcript2365.chr11.nnic	NA	45851031	45857127	Gene ID= novel_gene_chr11_2366 TPM= 5.84 Transcript Type= NA
chr11	45885651	45906465	45885651	45906465	+	ENST00000241014.6@MAPK8IP1	ENST00000241014.6	protein_coding	45885651,45898085,45900138,45901980,45902372,45903365,45903989,45904455,45904718,45904971,45905151,45905649	45885921,45898190,45900452,45902061,45903184,45903440,45904161,45904564,45904834,45905041,45905249,45906465	Gene ID= ENSG00000121653.11 TPM= 5.84 Transcript Type= protein_coding
chr11	45900114	45906465	45900114	45906465	+	transcript2368.chr11.nic@MAPK8IP1	transcript2368.chr11.nic	protein_coding	45900114,45901980,45902372,45903365,45903989,45904455,45904718,45904971,45905151,45905649	45900452,45902061,45903184,45903440,45904161,45904564,45904834,45905041,45905249,45906465	Gene ID= ENSG00000121653.11 TPM= 8.17 Transcript Type= NA
chr11	45909669	45917829	45909669	45917829	-	ENST00000241041.7@PEX16	ENST00000241041.7	protein_coding	45917700,45917458,45916227,45915703,45915468,45914604,45914316,45914131,45913819,45910898,45909669	45917829,45917493,45916303,45915836,45915568,45914684,45914468,45914203,45913938,45910962,45910177	Gene ID= ENSG00000121680.15 TPM= 1.17 Transcript Type= protein_coding
chr11	45910174	45918055	45910174	45918055	-	ENST00000378750.9@PEX16	ENST00000378750.9	protein_coding	45917700,45917458,45916227,45915703,45915468,45914604,45914316,45914131,45913819,45910898,45910174	45918055,45917493,45916303,45915836,45915568,45914684,45914468,45914203,45913938,45910962,45910312	Gene ID= ENSG00000121680.15 TPM= 31.53 Transcript Type= protein_coding
chr11	45932566	46121178	45932566	46121178	-	ENST00000323180.10@PHF21A	ENST00000323180.10	protein_coding	46120935,46092183,46084166,46079134,46076754,45979760,45971116,45969815,45965315,45953527,45950206,45949402,45948886,45946076,45938157,45936494,45935636,45932566	46121178,46092223,46084302,46079166,46076819,45979966,45971367,45969904,45965608,45953625,45950257,45949481,45948946,45946098,45938312,45936569,45935739,45934225	Gene ID= ENSG00000135365.15 TPM= 4.67 Transcript Type= protein_coding
chr11	45971892	45975878	45971892	45975878	-	transcript2391.chr11.nnic@NA	transcript2391.chr11.nnic	NA	45971892	45975878	Gene ID= novel_gene_chr11_2392 TPM= 4.67 Transcript Type= NA
chr11	46277631	46315387	46277631	46315387	+	transcript2400.chr11.nic@CREB3L1	transcript2400.chr11.nic	protein_coding	46277631,46299935,46307816,46309989,46311032,46312325,46312612,46312851,46315171	46278213,46300163,46308000,46310067,46311189,46312474,46312670,46312919,46315387	Gene ID= ENSG00000157613.10 TPM= 2.34 Transcript Type= NA
chr11	46277661	46321422	46277661	46321422	+	ENST00000621158.4@CREB3L1	ENST00000621158.4	protein_coding	46277661,46299935,46307816,46309989,46311032,46312325,46312612,46312851,46316286,46317361,46320264,46320710	46278213,46300163,46308000,46310067,46311189,46312474,46312670,46312919,46316385,46317487,46320528,46321422	Gene ID= ENSG00000157613.10 TPM= 46.7 Transcript Type= protein_coding
chr11	46347572	46380554	46347572	46380554	+	ENST00000456247.6@DGKZ	ENST00000456247.6	protein_coding	46347572,46367291,46367652,46368005,46369494,46369941,46371313,46371487,46371704,46372075,46372428,46372617,46372771,46372961,46374157,46374399,46374604,46374766,46374934,46375432,46375851,46376066,46376328,46376524,46377073,46378198,46378457,46378991,46379203,46379469,46379831	46347820,46367399,46367747,46368079,46369550,46370009,46371384,46371603,46371775,46372170,46372510,46372677,46372884,46373101,46374235,46374454,46374666,46374839,46375045,46375631,46375951,46376145,46376397,46376564,46377212,46378229,46378500,46379111,46379236,46379568,46380554	Gene ID= ENSG00000149091.15 TPM= 40.87 Transcript Type= protein_coding
chr11	46350857	46355398	46350857	46355398	-	transcript2410.chr11.nnic@NA	transcript2410.chr11.nnic	NA	46350857	46355398	Gene ID= novel_gene_chr11_2411 TPM= 18.68 Transcript Type= NA
chr11	46381676	46383806	46381676	46383806	+	ENST00000395566.8@MDK	ENST00000395566.8	protein_coding	46381676,46382057,46382294,46382587,46383469	46381758,46382133,46382461,46382748,46383806	Gene ID= ENSG00000110492.15 TPM= 15.18 Transcript Type= protein_coding
chr11	46381753	46383783	46381753	46383783	+	ENST00000407067.1@MDK	ENST00000407067.1	protein_coding	46381753,46382294,46382587,46383469	46382133,46382461,46382748,46383783	Gene ID= ENSG00000110492.15 TPM= 1.17 Transcript Type= protein_coding
chr11	46396414	46594080	46396414	46594080	-	transcript2420.chr11.nic@AMBRA1	transcript2420.chr11.nic	protein_coding	46593828,46548246,46547817,46547113,46545604,46543975,46543252,46541945,46512727,46508191,46494124,46493608,46443488,46434849,46433474,46417913,46410276,46408513,46396414	46594080,46548500,46547875,46547296,46545776,46544041,46543398,46542981,46512813,46508370,46494204,46493708,46443598,46435037,46433628,46418052,46410368,46408706,46397943	Gene ID= ENSG00000110497.14 TPM= 17.51 Transcript Type= NA
chr11	46396414	46594080	46396414	46594080	-	transcript2424.chr11.nnic@AMBRA1	transcript2424.chr11.nnic	protein_coding	46593828,46548246,46547817,46547113,46545604,46543975,46543252,46541945,46494124,46493608,46443488,46434849,46433474,46417913,46410276,46408513,46396414	46594080,46548500,46547875,46547296,46545776,46544041,46543398,46542981,46494204,46493708,46443598,46435037,46433628,46418052,46410368,46408706,46397943	Gene ID= ENSG00000110497.14 TPM= 5.84 Transcript Type= NA
chr11	46428653	46429150	46428653	46429150	-	ENST00000467930.1@AC024293.1	ENST00000467930.1	processed_pseudogene	46428653	46429150	Gene ID= ENSG00000244313.3 TPM= 9.34 Transcript Type= processed_pseudogene
chr11	46602448	46616862	46602448	46616862	-	transcript2432.chr11.nnic@HARBI1	transcript2432.chr11.nnic	protein_coding	46616503,46615568,46602448	46616862,46616383,46603909	Gene ID= ENSG00000180423.4 TPM= 2.34 Transcript Type= NA
chr11	46617553	46674520	46617553	46674520	+	transcript2444.chr11.nic@ATG13	transcript2444.chr11.nic	protein_coding	46617553,46618260,46630045,46644279,46645339,46645870,46649137,46650177,46656233,46657095,46657524,46659392,46665383,46667773,46668499,46668794,46669404,46672255	46617890,46618375,46630100,46644360,46645419,46645989,46649183,46650317,46656273,46657191,46657622,46659485,46665519,46667887,46668576,46668910,46669532,46674520	Gene ID= ENSG00000175224.16 TPM= 10.51 Transcript Type= NA
chr11	46617553	46673041	46617553	46673041	+	transcript2451.chr11.nic@ATG13	transcript2451.chr11.nic	protein_coding	46617553,46618260,46644279,46645339,46645870,46649137,46650177,46656233,46657095,46657524,46659392,46665383,46667773,46668499,46668794,46669404,46672255	46617890,46618375,46644360,46645419,46645989,46649183,46650317,46656273,46657191,46657622,46659485,46665519,46667887,46668576,46668910,46669532,46673041	Gene ID= ENSG00000175224.16 TPM= 2.34 Transcript Type= NA
chr11	46617557	46673041	46617557	46673041	+	transcript2453.chr11.nic@ATG13	transcript2453.chr11.nic	protein_coding	46617557,46644279,46645339,46645870,46649137,46650177,46656233,46657095,46657524,46659392,46665383,46667773,46668499,46668794,46669404,46672255	46617890,46644360,46645419,46645989,46649183,46650317,46656273,46657191,46657622,46659485,46665519,46667887,46668576,46668910,46669532,46673041	Gene ID= ENSG00000175224.16 TPM= 4.67 Transcript Type= NA
chr11	46617577	46674520	46617577	46674520	+	ENST00000524625.5@ATG13	ENST00000524625.5	protein_coding	46617577,46630045,46644279,46645339,46645870,46649137,46650177,46656233,46657095,46657524,46659392,46665383,46667773,46668499,46668794,46669404,46672255	46617890,46630100,46644360,46645419,46645989,46649183,46650317,46656273,46657191,46657622,46659485,46665519,46667887,46668576,46668910,46669532,46674520	Gene ID= ENSG00000175224.16 TPM= 7.01 Transcript Type= protein_coding
chr11	46677080	46700599	46677080	46700599	-	ENST00000311956.8@ARHGAP1	ENST00000311956.8	protein_coding	46700551,46695975,46695660,46688173,46682051,46681293,46681011,46680640,46680487,46680205,46679648,46679365,46677080	46700599,46696156,46695755,46688260,46682182,46681379,46681109,46680747,46680563,46680282,46679776,46679468,46679225	Gene ID= ENSG00000175220.11 TPM= 96.91 Transcript Type= protein_coding
chr11	46701025	46705912	46701025	46705912	+	transcript2464.chr11.nic@ZNF408	transcript2464.chr11.nic	protein_coding	46701025,46701399,46702704,46704353	46701099,46701676,46703243,46705912	Gene ID= ENSG00000175213.2 TPM= 2.34 Transcript Type= NA
chr11	46700818	46705912	46700818	46705912	+	ENST00000311764.2@ZNF408	ENST00000311764.2	protein_coding	46700818,46701399,46702704,46702984,46704353	46701099,46701676,46702765,46703243,46705912	Gene ID= ENSG00000175213.2 TPM= 32.69 Transcript Type= protein_coding
chr11	46743536	46846308	46743536	46846308	-	ENST00000312055.9@CKAP5	ENST00000312055.9	protein_coding	46846220,46821175,46818310,46816198,46811007,46809742,46809400,46808031,46801200,46798083,46797805,46796812,46795594,46790470,46790076,46788681,46784488,46783274,46780428,46780194,46778460,46778139,46777439,46776255,46770788,46769963,46767575,46765131,46763481,46762976,46762627,46762000,46760612,46759269,46758923,46753310,46752635,46751346,46751118,46750528,46750274,46744426,46743536	46846308,46821268,46818503,46816404,46811178,46809874,46809500,46808144,46801304,46798172,46797969,46796940,46795776,46790583,46790186,46788773,46784673,46783368,46780485,46780319,46778599,46778313,46777552,46776383,46770982,46770098,46767663,46765256,46763630,46763179,46762762,46762193,46760784,46759442,46759043,46753497,46752710,46751534,46751255,46750611,46750433,46744577,46744265	Gene ID= ENSG00000175216.14 TPM= 7.01 Transcript Type= protein_coding
chr11	46856868	46918622	46856868	46918622	-	ENST00000378623.5@LRP4	ENST00000378623.5	protein_coding	46918328,46902783,46900262,46899863,46899387,46898904,46898558,46896869,46896210,46895884,46895166,46894589,46892973,46890277,46889944,46889411,46886325,46886091,46883871,46881702,46879126,46878907,46877199,46876744,46876466,46875804,46875456,46874800,46873375,46873100,46871525,46868988,46868600,46867979,46865119,46864448,46862606,46856868	46918622,46902929,46900378,46899976,46899503,46899032,46898677,46896994,46896335,46896018,46895291,46894819,46893129,46890494,46890120,46889533,46886533,46886172,46883976,46881903,46879315,46879038,46877339,46876830,46876637,46875966,46875681,46875103,46873593,46873234,46871633,46869132,46868713,46868114,46865186,46864535,46862747,46859315	Gene ID= ENSG00000134569.9 TPM= 10.51 Transcript Type= protein_coding
chr11	46936709	47162244	46936709	47162244	+	transcript2480.chr11.nnic@C11orf49	transcript2480.chr11.nnic	protein_coding	46936709,46987208,47052388,47137645,47155176,47157023,47157813,47161127,47161998	46936851,46987310,47052518,47137729,47155261,47157218,47157922,47161190,47162244	Gene ID= ENSG00000149179.13 TPM= 3.5 Transcript Type= NA
chr11	46936747	47162228	46936747	47162228	+	ENST00000278460.11@C11orf49	ENST00000278460.11	protein_coding	46936747,46987208,47052388,47137645,47155176,47157023,47157813,47161127,47161464	46936851,46987310,47052518,47137729,47155261,47157218,47157922,47161190,47162228	Gene ID= ENSG00000149179.13 TPM= 33.86 Transcript Type= protein_coding
chr11	46936768	47162247	46936768	47162247	+	ENST00000395460.6@C11orf49	ENST00000395460.6	protein_coding	46936768,46987208,47052388,47137645,47155176,47157023,47157813,47161127	46936851,46987310,47052518,47137729,47155261,47157218,47157922,47162247	Gene ID= ENSG00000149179.13 TPM= 4.67 Transcript Type= protein_coding
chr11	47164301	47168814	47164301	47168814	-	transcript2487.chr11.nic@ARFGAP2	transcript2487.chr11.nic	protein_coding	47168123,47167909,47166506,47166268,47164301	47168814,47168043,47166886,47166386,47165502	Gene ID= ENSG00000149182.14 TPM= 11.68 Transcript Type= NA
chr11	47177557	47186440	47177557	47186440	-	ENST00000532457.5@PACSIN3	ENST00000532457.5	protein_coding	47186349,47183004,47182674,47182403,47180455,47180186,47179411,47179155,47178894,47178366,47177557	47186440,47183069,47182764,47182559,47180690,47180341,47179586,47179279,47179027,47178487,47178046	Gene ID= ENSG00000165912.15 TPM= 60.71 Transcript Type= nonsense_mediated_decay
chr11	47177525	47186407	47177525	47186407	-	ENST00000298838.10@PACSIN3	ENST00000298838.10	protein_coding	47186349,47183004,47182674,47182403,47180455,47180186,47179411,47179159,47178894,47178366,47177525	47186407,47183069,47182764,47182559,47180690,47180341,47179586,47179279,47179030,47178487,47178046	Gene ID= ENSG00000165912.15 TPM= 22.18 Transcript Type= protein_coding
chr11	47214942	47239240	47214942	47239240	+	ENST00000256996.8@DDB2	ENST00000256996.8	protein_coding	47214942,47216336,47216858,47232814,47234573,47234757,47235270,47237837,47238138,47238800	47215263,47216472,47217049,47232959,47234672,47234934,47235412,47238001,47238183,47239240	Gene ID= ENSG00000134574.11 TPM= 31.53 Transcript Type= protein_coding
chr11	47214974	47239216	47214974	47239216	+	transcript2518.chr11.nic@DDB2	transcript2518.chr11.nic	protein_coding	47214974,47216858,47232814,47234573,47234757,47235270,47237837,47238138,47238800	47216472,47217049,47232959,47234672,47234934,47235412,47238001,47238183,47239216	Gene ID= ENSG00000134574.11 TPM= 2.92 Transcript Type= NA
chr11	47214974	47239216	47214974	47239216	+	transcript2524.chr11.nic@DDB2	transcript2524.chr11.nic	protein_coding	47214974,47216858,47232814,47234573,47235270,47237837,47238138,47238800	47216472,47217049,47232959,47234672,47235412,47238001,47238183,47239216	Gene ID= ENSG00000134574.11 TPM= 2.92 Transcript Type= NA
chr11	47239302	47248816	47239302	47248816	-	transcript2516.chr11.nnic@ACP2	transcript2516.chr11.nnic	protein_coding	47248676,47248038,47247641,47245682,47245474,47245305,47243239,47243018,47242723,47239302	47248816,47248133,47247727,47245834,47245572,47245394,47243321,47243124,47242898,47240249	Gene ID= ENSG00000134575.9 TPM= 11.68 Transcript Type= NA
chr11	47257627	47268845	47257627	47268845	+	transcript2503.chr11.nic@NR1H3	transcript2503.chr11.nic	protein_coding	47257627,47257996,47259180,47259791,47260409,47261241,47261547,47261919,47267913,47268261,47268550	47257735,47258129,47259259,47259979,47260675,47261449,47261726,47262018,47268026,47268355,47268845	Gene ID= ENSG00000025434.18 TPM= 15.76 Transcript Type= NA
chr11	47257979	47268845	47257979	47268845	+	ENST00000467728.5@NR1H3	ENST00000467728.5	protein_coding	47257979,47259791,47260409,47261241,47261547,47261919,47267913,47268261,47268550	47259259,47259979,47260675,47261449,47261726,47262018,47268026,47268355,47268845	Gene ID= ENSG00000025434.18 TPM= 1.75 Transcript Type= protein_coding
chr11	47270133	47330031	47270133	47330031	+	transcript2496.chr11.nic@MADD	transcript2496.chr11.nic	protein_coding	47270133,47273827,47274563,47275899,47276732,47278165,47278999,47281575,47282381,47282813,47284178,47284375,47284941,47285451,47286433,47288968,47289391,47289867,47290149,47290610,47293883,47295496,47295897,47308591,47309281,47309507,47311732,47315220,47323671,47324265,47324471,47326738,47328658,47329046	47270246,47273976,47275159,47276202,47276863,47278278,47279079,47281753,47282616,47282969,47284281,47284565,47285065,47285590,47286534,47289027,47289493,47290053,47290299,47290816,47293983,47295579,47296055,47308699,47309401,47309612,47311842,47315327,47323835,47324337,47324577,47326807,47328704,47330031	Gene ID= ENSG00000110514.19 TPM= 5.06 Transcript Type= NA
chr11	47269674	47330031	47269674	47330031	+	ENST00000402799.5@MADD	ENST00000402799.5	protein_coding	47269674,47273827,47274563,47275899,47276732,47278165,47278999,47281575,47282381,47282813,47284178,47284375,47284941,47285451,47286433,47289391,47289867,47290149,47290610,47293883,47295496,47295897,47308591,47309281,47309507,47311732,47315220,47323671,47324265,47324471,47326738,47328658,47329046	47269750,47273976,47275159,47276202,47276863,47278278,47279079,47281753,47282616,47282969,47284281,47284565,47285065,47285590,47286534,47289493,47290053,47290299,47290816,47293983,47295579,47296055,47308699,47309401,47309612,47311842,47315327,47323835,47324337,47324577,47326807,47328704,47330031	Gene ID= ENSG00000110514.19 TPM= 5.64 Transcript Type= protein_coding
chr11	47269674	47330031	47269674	47330031	+	ENST00000407859.7@MADD	ENST00000407859.7	protein_coding	47269674,47273827,47274563,47275899,47276732,47278165,47278999,47281575,47282381,47282813,47284178,47284375,47284941,47285451,47286433,47288968,47289391,47289867,47290149,47290610,47293883,47295496,47295897,47308591,47309281,47309507,47311732,47315220,47323671,47324265,47324471,47326738,47328658,47329046	47269750,47273976,47275159,47276202,47276863,47278278,47279079,47281753,47282616,47282969,47284281,47284565,47285065,47285590,47286534,47289027,47289493,47290053,47290299,47290816,47293983,47295579,47296055,47308699,47309401,47309612,47311842,47315327,47323835,47324337,47324577,47326807,47328704,47330031	Gene ID= ENSG00000110514.19 TPM= 5.06 Transcript Type= protein_coding
chr11	47270156	47330030	47270156	47330030	+	ENST00000402192.6@MADD	ENST00000402192.6	protein_coding	47270156,47273827,47274563,47275899,47276732,47278165,47278999,47281575,47282381,47282813,47284178,47284375,47284941,47285451,47286433,47289391,47289867,47290149,47290610,47293883,47295496,47295897,47308591,47309281,47309507,47311732,47315220,47323671,47324265,47324471,47326738,47328658,47329046	47270246,47273976,47275159,47276202,47276863,47278278,47279079,47281753,47282616,47282969,47284281,47284565,47285194,47285590,47286534,47289493,47290053,47290299,47290816,47293983,47295576,47296055,47308699,47309401,47309612,47311842,47315327,47323835,47324337,47324577,47326807,47328704,47330030	Gene ID= ENSG00000110514.19 TPM= 1.75 Transcript Type= protein_coding
chr11	47381084	47382791	47381084	47382791	-	transcript2568.chr11.nnic@NA	transcript2568.chr11.nnic	NA	47381084	47382791	Gene ID= novel_gene_chr11_2569 TPM= 2.34 Transcript Type= NA
chr11	47408593	47416496	47408593	47416496	+	transcript2548.chr11.nnic@SLC39A13	transcript2548.chr11.nnic	protein_coding	47408593,47410087,47411926,47412346,47413400,47413597,47414303,47414777,47415060,47415288	47408662,47410395,47412039,47412467,47413507,47413686,47414475,47414909,47415159,47416496	Gene ID= ENSG00000165915.13 TPM= 10.06 Transcript Type= NA
chr11	47408487	47416496	47408487	47416496	+	transcript2551.chr11.nic@SLC39A13	transcript2551.chr11.nic	protein_coding	47408487,47410087,47411926,47412346,47413400,47413597,47414425,47414777,47415060,47415288	47408662,47410395,47412039,47412467,47413507,47413686,47414475,47414909,47415159,47416496	Gene ID= ENSG00000165915.13 TPM= 258.76 Transcript Type= NA
chr11	47408487	47416495	47408487	47416495	+	transcript2553.chr11.nic@SLC39A13	transcript2553.chr11.nic	protein_coding	47408487,47410087,47411926,47412346,47413400,47413597,47414425,47414777,47415060	47408662,47410395,47412039,47412467,47413507,47413686,47414475,47414909,47416495	Gene ID= ENSG00000165915.13 TPM= 9.48 Transcript Type= NA
chr11	47408487	47416496	47408487	47416496	+	transcript2554.chr11.nic@SLC39A13	transcript2554.chr11.nic	protein_coding	47408487,47410087,47411926,47412346,47413400,47413597,47414425,47414777,47415288	47408662,47410395,47412039,47412467,47413507,47413686,47414475,47415159,47416496	Gene ID= ENSG00000165915.13 TPM= 9.48 Transcript Type= NA
chr11	47408597	47416496	47408597	47416496	+	transcript2556.chr11.nic@SLC39A13	transcript2556.chr11.nic	protein_coding	47408597,47410087,47411926,47412346,47413400,47413597,47414777,47415060,47415288	47408662,47410395,47412039,47412467,47413507,47414475,47414909,47415159,47416496	Gene ID= ENSG00000165915.13 TPM= 14.74 Transcript Type= NA
chr11	47408629	47416501	47408629	47416501	+	ENST00000362021.8@SLC39A13	ENST00000362021.8	protein_coding	47408629,47410087,47411926,47412346,47413400,47413597,47414425,47414777,47415039,47415288	47408662,47410395,47412039,47412467,47413507,47413686,47414475,47414909,47415159,47416501	Gene ID= ENSG00000165915.13 TPM= 5.98 Transcript Type= protein_coding
chr11	47410085	47416494	47410085	47416494	+	ENST00000524928.1@SLC39A13	ENST00000524928.1	protein_coding	47410085,47411926,47412346,47413400,47413597	47410395,47412039,47412467,47413507,47416494	Gene ID= ENSG00000165915.13 TPM= 8.17 Transcript Type= protein_coding
chr11	47412759	47414465	47412759	47414465	-	transcript2566.chr11.nnic@NA	transcript2566.chr11.nnic	NA	47413606,47412759	47414465,47413516	Gene ID= novel_gene_chr11_2567 TPM= 3.5 Transcript Type= NA
chr11	47418769	47426473	47418769	47426473	-	ENST00000619920.4@PSMC3	ENST00000619920.4	protein_coding	47426205,47425867,47425121,47424607,47424429,47424046,47422830,47422574,47420631,47420264,47419116,47418769	47426473,47425950,47425246,47424711,47424491,47424183,47422973,47422722,47420727,47420409,47419197,47418945	Gene ID= ENSG00000165916.8 TPM= 172.22 Transcript Type= protein_coding
chr11	47470316	47553135	47470316	47553135	-	transcript2585.chr11.nnic@CELF1	transcript2585.chr11.nnic	protein_coding	47552992,47506858,47500861,47499453,47488837,47487159,47486750,47484389,47483453,47482695,47478877,47477297,47476846,47475336,47473088,47472191,47470316	47553135,47506897,47500932,47499604,47489024,47487241,47486798,47484523,47483532,47482856,47478952,47477425,47476956,47475521,47473231,47472357,47472102	Gene ID= ENSG00000149187.18 TPM= 3.5 Transcript Type= NA
chr11	47470316	47553171	47470316	47553171	-	transcript2594.chr11.nic@CELF1	transcript2594.chr11.nic	protein_coding	47552992,47500861,47499453,47488837,47487159,47486750,47484389,47483453,47482695,47478877,47477297,47476846,47475336,47473088,47472191,47470316	47553171,47500932,47499604,47489024,47487241,47486798,47484523,47483532,47482856,47478952,47477425,47476956,47475521,47473231,47472357,47472102	Gene ID= ENSG00000149187.18 TPM= 3.5 Transcript Type= NA
chr11	47470316	47553141	47470316	47553141	-	transcript2605.chr11.nnic@CELF1	transcript2605.chr11.nnic	protein_coding	47552992,47536620,47488837,47487159,47486750,47484389,47483453,47482695,47478877,47477297,47476846,47475336,47473088,47472191,47470316	47553141,47536730,47489024,47487241,47486798,47484523,47483532,47482856,47478952,47477425,47476956,47475521,47473231,47472357,47472102	Gene ID= ENSG00000149187.18 TPM= 3.5 Transcript Type= NA
chr11	47470316	47553143	47470316	47553143	-	transcript2621.chr11.nic@CELF1	transcript2621.chr11.nic	protein_coding	47552992,47488837,47487159,47486750,47484389,47483453,47482695,47478877,47477297,47476846,47475336,47473088,47472191,47470316	47553143,47489024,47487241,47486798,47484523,47483532,47482856,47478952,47477425,47476956,47475521,47473231,47472357,47472102	Gene ID= ENSG00000149187.18 TPM= 22.18 Transcript Type= NA
chr11	47470329	47553135	47470329	47553135	-	transcript2624.chr11.nic@CELF1	transcript2624.chr11.nic	protein_coding	47552992,47488837,47487159,47486750,47484389,47483453,47482695,47478877,47477297,47476846,47475336,47473088,47472191,47470329	47553135,47489024,47487241,47486798,47484523,47483532,47482856,47478952,47477425,47476956,47475521,47473231,47472357,47470555	Gene ID= ENSG00000149187.18 TPM= 3.5 Transcript Type= NA
chr11	47470287	47553155	47470287	47553155	-	transcript2625.chr11.nic@CELF1	transcript2625.chr11.nic	protein_coding	47552992,47488837,47487159,47486750,47484389,47483453,47482695,47478877,47477297,47476846,47475336,47473088,47470287	47553155,47489024,47487241,47486798,47484523,47483532,47482856,47478952,47477425,47476956,47475521,47473231,47472357	Gene ID= ENSG00000149187.18 TPM= 7.01 Transcript Type= NA
chr11	47465933	47553117	47465933	47553117	-	ENST00000310513.10@CELF1	ENST00000310513.10	protein_coding	47552992,47488837,47487159,47486750,47484389,47483453,47482695,47478877,47477297,47476846,47475336,47473088,47472191,47465933	47553117,47489024,47487241,47486798,47484523,47483532,47482856,47478940,47477425,47476956,47475521,47473231,47472357,47468891	Gene ID= ENSG00000149187.18 TPM= 23.35 Transcript Type= protein_coding
chr11	47470316	47553117	47470316	47553117	-	ENST00000531165.5@CELF1	ENST00000531165.5	protein_coding	47552992,47500861,47499453,47488837,47487159,47486750,47484389,47483453,47482695,47478877,47477297,47476846,47475336,47473088,47472191,47470316	47553117,47500932,47499604,47489024,47487241,47486798,47484523,47483532,47482856,47478952,47477425,47476959,47475521,47473231,47472357,47472102	Gene ID= ENSG00000149187.18 TPM= 17.51 Transcript Type= protein_coding
chr11	47539182	47541688	47539182	47541688	+	transcript2647.chr11.nnic@NA	transcript2647.chr11.nnic	NA	47539182	47541688	Gene ID= novel_gene_chr11_2648 TPM= 4.67 Transcript Type= NA
chr11	47550460	47552029	47550460	47552029	+	transcript2651.chr11.nnic@NA	transcript2651.chr11.nnic	NA	47550460	47552029	Gene ID= novel_gene_chr11_2652 TPM= 7.01 Transcript Type= NA
chr11	47579010	47584562	47579010	47584562	+	ENST00000263774.8@NDUFS3	ENST00000263774.8	protein_coding	47579010,47579269,47580525,47580835,47582088,47582349,47584314	47579158,47579334,47580622,47580984,47582213,47582468,47584562	Gene ID= ENSG00000213619.9 TPM= 54.88 Transcript Type= protein_coding
chr11	47565458	47572360	47565458	47572360	+	ENST00000534775.1@PTPMT1	ENST00000534775.1	protein_coding	47565458,47569700,47571471	47565986,47569891,47572360	Gene ID= ENSG00000110536.13 TPM= 12.84 Transcript Type= protein_coding
chr11	47565430	47571927	47565430	47571927	+	ENST00000426530.2@PTPMT1	ENST00000426530.2	protein_coding	47565430,47571471	47565986,47571927	Gene ID= ENSG00000110536.13 TPM= 11.68 Transcript Type= protein_coding
chr11	47565601	47571769	47565601	47571769	+	ENST00000326674.9@PTPMT1	ENST00000326674.9	protein_coding	47565601,47565906,47569700,47571471	47565796,47565986,47569891,47571769	Gene ID= ENSG00000110536.13 TPM= 43.2 Transcript Type= protein_coding
chr11	47572227	47579015	47572227	47579015	-	ENST00000430070.6@KBTBD4	ENST00000430070.6	protein_coding	47578933,47577411,47575593,47572227	47579015,47578028,47575699,47573790	Gene ID= ENSG00000123444.13 TPM= 60.71 Transcript Type= protein_coding
chr11	47572198	47578969	47572198	47578969	-	ENST00000395288.6@KBTBD4	ENST00000395288.6	protein_coding	47578828,47577411,47575593,47572198	47578969,47578028,47575699,47573790	Gene ID= ENSG00000123444.13 TPM= 10.51 Transcript Type= protein_coding
chr11	47617316	47642623	47617316	47642623	-	ENST00000302503.7@MTCH2	ENST00000302503.7	protein_coding	47642379,47638967,47638699,47635545,47634672,47631654,47631036,47630555,47628953,47627080,47625674,47622701,47617316	47642623,47639051,47638805,47635571,47634734,47631711,47631087,47630614,47629046,47627127,47625741,47622776,47618919	Gene ID= ENSG00000109919.9 TPM= 39.7 Transcript Type= protein_coding
chr11	47617316	47642609	47617316	47642609	-	transcript2660.chr11.nnic@MTCH2	transcript2660.chr11.nnic	protein_coding	47642401,47638967,47638699,47635545,47634672,47631036,47630555,47628953,47627080,47625674,47622701,47617316	47642609,47639051,47638805,47635571,47634734,47631087,47630614,47629046,47627127,47625741,47622776,47618919	Gene ID= ENSG00000109919.9 TPM= 2.34 Transcript Type= NA
chr11	47617316	47642556	47617316	47642556	-	transcript2661.chr11.nnic@MTCH2	transcript2661.chr11.nnic	protein_coding	47642379,47638967,47638699,47635545,47634672,47631654,47631036,47630555,47628953,47627080,47622701,47617316	47642556,47639051,47638805,47635571,47634734,47631711,47631087,47630614,47629046,47627127,47622776,47618919	Gene ID= ENSG00000109919.9 TPM= 2.34 Transcript Type= NA
chr11	47716517	47767330	47716517	47767330	-	transcript2682.chr11.nic@FNBP4	transcript2682.chr11.nic	protein_coding	47767069,47765270,47754528,47752916,47751143,47750916,47746056,47743953,47736616,47734025,47732537,47732117,47731374,47725737,47724468,47724028,47722976,47719929,47716517	47767330,47765362,47754664,47753102,47751290,47751036,47746394,47744163,47736740,47734129,47732670,47732219,47731561,47725836,47724778,47724172,47723316,47720086,47717512	Gene ID= ENSG00000109920.12 TPM= 2.34 Transcript Type= NA
chr11	47716517	47767352	47716517	47767352	-	transcript2683.chr11.nic@FNBP4	transcript2683.chr11.nic	protein_coding	47767069,47765270,47754528,47752916,47751143,47750916,47746056,47743953,47736616,47734025,47732117,47731374,47725737,47724468,47724028,47722976,47719929,47716517	47767352,47765362,47754664,47753102,47751290,47751036,47746394,47744163,47736740,47734129,47732670,47731561,47725836,47724778,47724172,47723316,47720086,47717512	Gene ID= ENSG00000109920.12 TPM= 3.5 Transcript Type= NA
chr11	47716517	47767325	47716517	47767325	-	transcript2687.chr11.nic@FNBP4	transcript2687.chr11.nic	protein_coding	47767069,47765270,47754528,47752916,47751143,47750916,47746056,47743953,47736616,47734025,47732537,47732117,47731374,47724468,47724028,47722976,47719929,47716517	47767325,47765362,47754664,47753102,47751290,47751036,47746394,47744163,47736740,47734129,47732670,47732219,47731561,47724778,47724172,47723316,47720086,47717512	Gene ID= ENSG00000109920.12 TPM= 3.5 Transcript Type= NA
chr11	47716517	47767316	47716517	47767316	-	transcript2690.chr11.nic@FNBP4	transcript2690.chr11.nic	protein_coding	47767069,47765270,47754528,47752916,47751143,47750916,47746056,47743953,47736616,47734025,47731374,47725737,47724468,47724028,47722976,47719929,47716517	47767316,47765362,47754664,47753102,47751290,47751036,47746394,47744163,47736740,47734129,47732670,47725836,47724778,47724172,47723316,47720086,47717512	Gene ID= ENSG00000109920.12 TPM= 3.5 Transcript Type= NA
chr11	47716517	47767333	47716517	47767333	-	transcript2691.chr11.nic@FNBP4	transcript2691.chr11.nic	protein_coding	47767069,47765270,47754528,47752916,47751143,47750916,47746056,47743953,47736616,47734025,47732117,47731374,47724468,47724028,47722976,47719929,47716517	47767333,47765362,47754664,47753102,47751290,47751036,47746394,47744163,47736740,47734129,47732670,47731561,47724778,47724172,47723316,47720086,47717512	Gene ID= ENSG00000109920.12 TPM= 2.34 Transcript Type= NA
chr11	47716517	47767314	47716517	47767314	-	transcript2693.chr11.nic@FNBP4	transcript2693.chr11.nic	protein_coding	47767069,47765270,47754528,47752916,47751143,47750916,47746056,47743953,47736616,47734025,47732537,47731374,47724468,47724028,47722976,47719929,47716517	47767314,47765362,47754664,47753102,47751290,47751036,47746394,47744163,47736740,47734129,47732670,47732219,47724778,47724172,47723316,47720086,47717512	Gene ID= ENSG00000109920.12 TPM= 9.34 Transcript Type= NA
chr11	47716517	47767314	47716517	47767314	-	transcript2695.chr11.nic@FNBP4	transcript2695.chr11.nic	protein_coding	47767069,47765270,47754528,47752916,47751143,47750916,47746056,47743953,47736616,47734025,47731374,47724468,47724028,47722976,47719929,47716517	47767314,47765362,47754664,47753102,47751290,47751036,47746394,47744163,47736740,47734129,47732670,47724778,47724172,47723316,47720086,47717512	Gene ID= ENSG00000109920.12 TPM= 9.34 Transcript Type= NA
chr11	47716517	47767325	47716517	47767325	-	transcript2698.chr11.nic@FNBP4	transcript2698.chr11.nic	protein_coding	47767069,47765270,47754528,47752916,47751143,47750916,47746056,47743953,47736616,47734025,47731374,47724468,47724028,47719929,47716517	47767325,47765362,47754664,47753102,47751290,47751036,47746394,47744163,47736740,47734129,47732670,47724778,47724172,47720086,47717512	Gene ID= ENSG00000109920.12 TPM= 2.34 Transcript Type= NA
chr11	47728849	47767449	47728849	47767449	-	transcript2700.chr11.nic@FNBP4	transcript2700.chr11.nic	protein_coding	47767069,47765270,47754528,47752916,47751143,47750916,47746056,47743953,47736616,47734025,47732537,47732117,47731374,47728849	47767449,47765362,47754664,47753102,47751290,47751036,47746394,47744163,47736740,47734129,47732670,47732219,47731561,47730190	Gene ID= ENSG00000109920.12 TPM= 3.5 Transcript Type= NA
chr11	47716517	47767301	47716517	47767301	-	ENST00000263773.9@FNBP4	ENST00000263773.9	protein_coding	47767069,47765270,47754528,47752916,47751143,47750916,47746056,47743953,47736616,47734025,47732537,47731374,47724468,47724028,47722976,47719929,47716517	47767301,47765362,47754664,47753102,47751290,47751036,47746394,47744163,47736740,47734129,47732670,47731561,47724778,47724172,47723316,47720086,47717512	Gene ID= ENSG00000109920.12 TPM= 17.51 Transcript Type= protein_coding
chr11	47753200	47754221	47753200	47754221	+	transcript2713.chr11.nnic@NA	transcript2713.chr11.nnic	NA	47753200	47754221	Gene ID= novel_gene_chr11_2714 TPM= 3.5 Transcript Type= NA
chr11	47778087	47848467	47778087	47848467	-	ENST00000378460.6@NUP160	ENST00000378460.6	protein_coding	47848219,47847848,47840378,47839843,47837545,47836887,47835651,47822087,47821724,47819374,47818056,47815946,47815479,47813316,47812882,47812302,47812064,47808396,47807070,47806153,47804549,47803438,47801811,47798368,47798168,47797978,47797779,47792786,47791930,47788501,47788182,47786453,47784922,47783073,47780343,47778087	47848467,47847959,47840588,47840065,47837623,47837001,47835809,47822164,47821821,47819458,47818124,47816029,47815649,47813415,47813047,47812429,47812224,47808529,47807140,47806312,47804618,47803536,47801930,47798463,47798262,47798074,47797884,47792946,47791990,47788611,47788305,47786554,47785063,47783198,47780447,47779194	Gene ID= ENSG00000030066.13 TPM= 31.91 Transcript Type= protein_coding
chr11	47778230	47848353	47778230	47848353	-	transcript2672.chr11.nnic@NUP160	transcript2672.chr11.nnic	protein_coding	47848219,47847848,47840378,47839843,47837545,47836887,47835651,47822087,47821724,47819374,47818056,47815946,47815479,47813316,47812882,47812302,47812064,47808396,47807070,47806153,47804549,47803438,47801811,47798368,47798168,47797978,47797779,47792786,47791930,47788501,47788182,47786453,47784922,47783073,47780343,47778230	47848353,47847959,47840588,47840065,47837623,47837001,47835809,47822164,47821821,47819458,47818124,47816029,47815649,47813415,47813047,47812429,47812224,47808529,47807140,47806312,47804618,47803536,47801930,47798463,47798262,47798074,47797884,47792946,47791990,47788611,47788305,47786554,47785063,47783146,47780447,47779194	Gene ID= ENSG00000030066.13 TPM= 2.72 Transcript Type= NA
chr11	47821376	47848353	47821376	47848353	-	transcript2707.chr11.nic@NUP160	transcript2707.chr11.nic	protein_coding	47848219,47847848,47840378,47839843,47837545,47836887,47835651,47822087,47821376	47848353,47847959,47840588,47840065,47837623,47837001,47835809,47822164,47821821	Gene ID= ENSG00000030066.13 TPM= 4.67 Transcript Type= NA
chr11	47821353	47848353	47821353	47848353	-	transcript2709.chr11.nic@NUP160	transcript2709.chr11.nic	protein_coding	47848219,47847848,47840378,47839843,47837545,47836887,47835651,47821353	47848353,47847959,47840588,47840065,47837623,47837001,47835809,47822164	Gene ID= ENSG00000030066.13 TPM= 3.5 Transcript Type= NA
chr11	47792012	47848334	47792012	47848334	-	ENST00000528071.5@NUP160	ENST00000528071.5	protein_coding	47848219,47847848,47840378,47839843,47837545,47836887,47835651,47822087,47821724,47819374,47818056,47815946,47815479,47813316,47812882,47812302,47812064,47808396,47807070,47806153,47804549,47803438,47801811,47798368,47798168,47797978,47797779,47792012	47848334,47847959,47840588,47840065,47837623,47837001,47835809,47822164,47821821,47819458,47818124,47816029,47815649,47813415,47813047,47812429,47812224,47808529,47807140,47806312,47804618,47803536,47801930,47798463,47798262,47798074,47797884,47792946	Gene ID= ENSG00000030066.13 TPM= 1.55 Transcript Type= protein_coding
chr11	49146635	49208670	49146635	49208670	-	ENST00000256999.6@FOLH1	ENST00000256999.6	protein_coding	49208292,49206067,49200255,49192793,49186644,49185669,49183149,49175859,49174892,49173357,49171195,49169195,49164705,49157952,49156717,49154228,49153846,49148639,49146635	49208670,49206172,49200441,49192894,49186769,49185855,49183242,49175957,49174977,49173476,49171277,49169258,49164772,49158043,49156807,49154492,49153927,49148731,49146945	Gene ID= ENSG00000086205.16 TPM= 1.17 Transcript Type= protein_coding
chr11	57299642	57322355	57299642	57322355	-	transcript2725.chr11.nic@TNKS1BP1	transcript2725.chr11.nic	protein_coding	57322237,57321792,57320079,57317818,57312534,57308395,57302459,57302074,57301807,57300884,57300528,57299642	57322355,57321950,57320712,57317887,57313889,57310556,57302825,57302224,57301943,57301041,57300600,57300081	Gene ID= ENSG00000149115.13 TPM= 61.3 Transcript Type= NA
chr11	57299642	57311489	57299642	57311489	-	transcript2729.chr11.nic@TNKS1BP1	transcript2729.chr11.nic	protein_coding	57311238,57308395,57302459,57302074,57301807,57300884,57300528,57299642	57311489,57310556,57302825,57302224,57301943,57301041,57300600,57300081	Gene ID= ENSG00000149115.13 TPM= 38.33 Transcript Type= NA
chr11	57299642	57324927	57299642	57324927	-	ENST00000358252.7@TNKS1BP1	ENST00000358252.7	protein_coding	57324840,57321792,57320079,57317818,57312534,57308395,57302459,57302074,57301807,57300884,57300528,57299642	57324927,57321950,57320712,57317887,57313889,57310556,57302825,57302224,57301943,57301041,57300600,57300081	Gene ID= ENSG00000149115.13 TPM= 228.85 Transcript Type= protein_coding
chr11	57299638	57324952	57299638	57324952	-	ENST00000528882.5@TNKS1BP1	ENST00000528882.5	protein_coding	57324840,57321792,57320065,57317818,57312534,57308891,57299638	57324952,57321950,57320712,57317887,57313889,57310556,57299961	Gene ID= ENSG00000149115.13 TPM= 5.45 Transcript Type= nonsense_mediated_decay
chr11	57304275	57306294	57304275	57306294	+	transcript2736.chr11.nnic@NA	transcript2736.chr11.nnic	NA	57304275	57306294	Gene ID= novel_gene_chr11_2737 TPM= 2.34 Transcript Type= NA
chr11	57325985	57335877	57325985	57335877	-	ENST00000278412.6@SSRP1	ENST00000278412.6	protein_coding	57335730,57335068,57334463,57333435,57332959,57332625,57332383,57332152,57331668,57330855,57330291,57330093,57328297,57327712,57327426,57326703,57325985	57335877,57335240,57334648,57333540,57333149,57332855,57332486,57332280,57331889,57330927,57330429,57330138,57328426,57327882,57327514,57326889,57326478	Gene ID= ENSG00000149136.8 TPM= 137.78 Transcript Type= protein_coding
chr11	57406954	57427121	57406954	57427121	-	transcript2753.chr11.nic@SLC43A3	transcript2753.chr11.nic	protein_coding	57427062,57426588,57425989,57425541,57423982,57421297,57420972,57417748,57416573,57414933,57414615,57409935,57409175,57406954	57427121,57426750,57426352,57425670,57424028,57421373,57421064,57417887,57416670,57415106,57414731,57410121,57409298,57407896	Gene ID= ENSG00000134802.17 TPM= 10.5 Transcript Type= NA
chr11	57406954	57427180	57406954	57427180	-	transcript2755.chr11.nic@SLC43A3	transcript2755.chr11.nic	protein_coding	57427062,57426588,57425989,57425541,57423982,57421297,57420972,57417748,57416573,57414933,57414615,57409935,57409175,57406954	57427180,57426652,57426389,57425670,57424028,57421373,57421064,57417887,57416670,57415106,57414731,57410121,57409298,57407896	Gene ID= ENSG00000134802.17 TPM= 35.4 Transcript Type= NA
chr11	57406954	57427180	57406954	57427180	-	transcript2758.chr11.nic@SLC43A3	transcript2758.chr11.nic	protein_coding	57427062,57426588,57425989,57425541,57423982,57421297,57420972,57417748,57416573,57414933,57414615,57409935,57409175,57406954	57427180,57426652,57426352,57425709,57424028,57421373,57421064,57417887,57416670,57415106,57414731,57410121,57409298,57407896	Gene ID= ENSG00000134802.17 TPM= 9.76 Transcript Type= NA
chr11	57406954	57427130	57406954	57427130	-	transcript2769.chr11.nic@SLC43A3	transcript2769.chr11.nic	protein_coding	57427062,57425989,57425541,57423982,57421297,57420972,57417748,57416573,57414933,57414615,57409935,57409175,57406954	57427130,57426352,57425670,57424028,57421373,57421064,57417887,57416670,57415106,57414731,57410121,57409298,57407896	Gene ID= ENSG00000134802.17 TPM= 17.89 Transcript Type= NA
chr11	57406956	57427121	57406956	57427121	-	ENST00000395124.5@SLC43A3	ENST00000395124.5	protein_coding	57427062,57426588,57425989,57425541,57423982,57421297,57420972,57417748,57416573,57414933,57414615,57409935,57409175,57406956	57427121,57426652,57426352,57425670,57424028,57421373,57421064,57417887,57416670,57415106,57414731,57410121,57409298,57407896	Gene ID= ENSG00000134802.17 TPM= 150.61 Transcript Type= protein_coding
chr11	57406954	57426945	57406954	57426945	-	ENST00000395123.6@SLC43A3	ENST00000395123.6	protein_coding	57426886,57426588,57425989,57425541,57423982,57421297,57420972,57417748,57416573,57414933,57414615,57409935,57409175,57406954	57426945,57426652,57426352,57425670,57424028,57421373,57421064,57417887,57416670,57415106,57414731,57410121,57409298,57407896	Gene ID= ENSG00000134802.17 TPM= 22.17 Transcript Type= protein_coding
chr11	57460549	57477534	57460549	57477534	+	ENST00000335099.7@RTN4RL2	ENST00000335099.7	protein_coding	57460549,57467609,57476162	57460896,57468090,57477534	Gene ID= ENSG00000186907.7 TPM= 14.01 Transcript Type= protein_coding
chr11	57484536	57515975	57484536	57515975	-	transcript2779.chr11.nnic@SLC43A1	transcript2779.chr11.nnic	protein_coding	57515914,57515444,57513958,57501152,57500988,57500779,57497753,57496031,57493993,57491716,57491591,57491224,57489251,57488916,57487095,57484536	57515975,57515706,57514124,57501329,57501043,57500855,57497845,57496164,57494171,57491862,57491626,57491362,57489392,57488989,57487218,57485242	Gene ID= ENSG00000149150.8 TPM= 3.5 Transcript Type= NA
chr11	57484534	57515786	57484534	57515786	-	ENST00000278426.7@SLC43A1	ENST00000278426.7	protein_coding	57515444,57513958,57501152,57500988,57500779,57497753,57496031,57493993,57491716,57491591,57491224,57489251,57488916,57487095,57484534	57515786,57514124,57501329,57501043,57500855,57497845,57496164,57494171,57491862,57491626,57491362,57489392,57488989,57487218,57485242	Gene ID= ENSG00000149150.8 TPM= 17.51 Transcript Type= protein_coding
chr11	57484536	57514885	57484536	57514885	-	ENST00000528450.5@SLC43A1	ENST00000528450.5	protein_coding	57514781,57513958,57501152,57500988,57500779,57497753,57496031,57493993,57491716,57491591,57491224,57489251,57488916,57487095,57484536	57514885,57514124,57501329,57501043,57500855,57497845,57496164,57494171,57491862,57491626,57491362,57489392,57488989,57487218,57485242	Gene ID= ENSG00000149150.8 TPM= 3.5 Transcript Type= protein_coding
chr11	57528463	57530765	57528463	57530765	-	ENST00000257245.8@TIMM10	ENST00000257245.8	protein_coding	57530658,57530119,57528463	57530765,57530234,57528918	Gene ID= ENSG00000134809.8 TPM= 15.18 Transcript Type= protein_coding
chr11	57551662	57567807	57551662	57567807	-	ENST00000287156.8@UBE2L6	ENST00000287156.8	protein_coding	57567585,57560337,57554437,57551662	57567807,57560432,57554623,57552509	Gene ID= ENSG00000156587.15 TPM= 236.44 Transcript Type= protein_coding
chr11	57551656	57568284	57551656	57568284	-	ENST00000340573.8@UBE2L6	ENST00000340573.8	protein_coding	57567849,57560337,57554437,57551656	57568284,57560432,57554623,57552509	Gene ID= ENSG00000156587.15 TPM= 8.76 Transcript Type= protein_coding
chr11	57597518	57614853	57597518	57614853	+	ENST00000278407.8@SERPING1	ENST00000278407.8	protein_coding	57597518,57598249,57599879,57602035,57606010,57606408,57611717,57614328	57597722,57598321,57600377,57602169,57606213,57606547,57611936,57614853	Gene ID= ENSG00000149131.15 TPM= 472.79 Transcript Type= protein_coding
chr11	57597690	57614847	57597690	57614847	+	transcript2806.chr11.nic@SERPING1	transcript2806.chr11.nic	protein_coding	57597690,57599879,57602035,57606010,57606408,57611717,57614328	57598321,57600377,57602169,57606213,57606547,57611936,57614847	Gene ID= ENSG00000149131.15 TPM= 175.16 Transcript Type= NA
chr11	57645088	57649944	57645088	57649944	-	ENST00000300022.7@YPEL4	ENST00000300022.7	protein_coding	57649685,57646967,57646751,57646297,57645088	57649944,57647291,57646794,57646405,57646070	Gene ID= ENSG00000166793.10 TPM= 7.01 Transcript Type= protein_coding
chr11	57657158	57661868	57657158	57661868	+	ENST00000533682.1@CLP1	ENST00000533682.1	protein_coding	57657158,57659455,57660765	57657860,57660082,57661868	Gene ID= ENSG00000172409.5 TPM= 37.36 Transcript Type= protein_coding
chr11	57657737	57661865	57657737	57661865	+	transcript2822.chr11.nic@CLP1	transcript2822.chr11.nic	protein_coding	57657737,57659455	57657860,57661865	Gene ID= ENSG00000172409.5 TPM= 2.34 Transcript Type= NA
chr11	57657763	57661864	57657763	57661864	+	ENST00000302731.4@CLP1	ENST00000302731.4	protein_coding	57657763,57659455,57660765	57657860,57659890,57661864	Gene ID= ENSG00000172409.5 TPM= 2.34 Transcript Type= protein_coding
chr11	57667798	57701182	57667798	57701182	+	transcript2835.chr11.nic@ZDHHC5	transcript2835.chr11.nic	protein_coding	57667798,57672021,57688508,57690031,57690335,57692611,57693783,57695920,57696761,57698559,57699866	57668187,57673194,57688665,57690203,57690437,57692702,57693915,57696043,57696873,57699418,57701182	Gene ID= ENSG00000156599.10 TPM= 18.68 Transcript Type= NA
chr11	57667896	57701187	57667896	57701187	+	ENST00000287169.7@ZDHHC5	ENST00000287169.7	protein_coding	57667896,57672021,57682422,57688508,57690031,57690335,57692611,57693783,57695920,57696761,57698559,57699866	57668187,57673194,57682543,57688665,57690203,57690437,57692702,57693915,57696043,57696873,57699418,57701187	Gene ID= ENSG00000156599.10 TPM= 103.33 Transcript Type= protein_coding
chr11	57703714	57712323	57703714	57712323	-	ENST00000431606.3@MED19	ENST00000431606.3	protein_coding	57711963,57704973,57704719,57704302,57703714	57712323,57705229,57704815,57704396,57704106	Gene ID= ENSG00000156603.16 TPM= 32.69 Transcript Type= protein_coding
chr11	57712607	57740973	57712607	57740973	+	ENST00000278422.8@TMX2	ENST00000278422.8	protein_coding	57712607,57737608,57737913,57738354,57738664,57738974,57739131,57740099	57712807,57737668,57738026,57738430,57738770,57739039,57739260,57740973	Gene ID= ENSG00000213593.9 TPM= 112.38 Transcript Type= protein_coding
chr11	57712603	57740973	57712603	57740973	+	ENST00000378312.8@TMX2	ENST00000378312.8	protein_coding	57712603,57737608,57738354,57738664,57738974,57739131,57740099	57712807,57737668,57738430,57738770,57739039,57739260,57740973	Gene ID= ENSG00000213593.9 TPM= 17.81 Transcript Type= protein_coding
chr11	57712614	57740969	57712614	57740969	+	ENST00000529403.1@TMX2	ENST00000529403.1	protein_coding	57712614,57737608,57737836,57738354,57738664,57738974,57739131,57740099	57712807,57737668,57738026,57738430,57738770,57739039,57739260,57740969	Gene ID= ENSG00000213593.9 TPM= 7.3 Transcript Type= nonsense_mediated_decay
chr11	57715588	57718648	57715588	57718648	-	transcript2870.chr11.nnic@NA	transcript2870.chr11.nnic	NA	57715588	57718648	Gene ID= novel_gene_chr11_2871 TPM= 3.5 Transcript Type= NA
chr11	57740483	57743037	57740483	57743037	+	transcript2868.chr11.nnic@NA	transcript2868.chr11.nnic	NA	57740483	57743037	Gene ID= novel_gene_chr11_2869 TPM= 3.5 Transcript Type= NA
chr11	57741353	57743038	57741353	57743038	+	ENST00000534355.5@SELENOH	ENST00000534355.5	protein_coding	57741353,57741809,57742117,57742863	57741717,57741954,57742247,57743038	Gene ID= ENSG00000211450.9 TPM= 80.56 Transcript Type= protein_coding
chr11	57761797	57819178	57761797	57819178	+	ENST00000361796.9@CTNND1	ENST00000361796.9	protein_coding	57761797,57789037,57791385,57794010,57795577,57796457,57801733,57803621,57804663,57805882,57806461,57806915,57808165,57808390,57809274,57810109,57811399,57814311,57815394,57816297	57762119,57789155,57791673,57794081,57795729,57796992,57802196,57803804,57804780,57806035,57806478,57806983,57808292,57808540,57809466,57810223,57811486,57814373,57815500,57819178	Gene ID= ENSG00000198561.13 TPM= 6.62 Transcript Type= protein_coding
chr11	57761797	57819178	57761797	57819178	+	ENST00000358694.10@CTNND1	ENST00000358694.10	protein_coding	57761797,57789037,57791385,57794010,57795577,57796457,57801733,57803621,57804663,57805882,57806915,57808165,57808390,57809274,57810109,57811399,57814311,57815394,57816297	57762046,57789155,57791673,57794081,57795729,57796992,57802196,57803804,57804780,57806035,57806983,57808292,57808540,57809466,57810223,57811486,57814373,57815500,57819178	Gene ID= ENSG00000198561.13 TPM= 11.42 Transcript Type= protein_coding
chr11	57761822	57818445	57761822	57818445	+	transcript2887.chr11.nic@CTNND1	transcript2887.chr11.nic	protein_coding	57761822,57789037,57791385,57795577,57796457,57801733,57803621,57804663,57805882,57806915,57808165,57808390,57809274,57810109,57811399,57814311,57815394,57816297	57762046,57789155,57791673,57795729,57796992,57802196,57803804,57804780,57806035,57806983,57808292,57808540,57809466,57810223,57811486,57814373,57815500,57818445	Gene ID= ENSG00000198561.13 TPM= 6.06 Transcript Type= NA
chr11	57761797	57819178	57761797	57819178	+	ENST00000530094.5@CTNND1	ENST00000530094.5	protein_coding	57761797,57794010,57795577,57796457,57801733,57803621,57804663,57805882,57806915,57808165,57808390,57809274,57810109,57811399,57814311,57815394,57815915,57816297	57762046,57794081,57795729,57796992,57802196,57803804,57804780,57806035,57806983,57808292,57808540,57809466,57810223,57811486,57814373,57815500,57816001,57819178	Gene ID= ENSG00000198561.13 TPM= 5.16 Transcript Type= protein_coding
chr11	57761797	57819178	57761797	57819178	+	ENST00000528621.5@CTNND1	ENST00000528621.5	protein_coding	57761797,57791494,57794010,57795577,57796457,57801733,57803621,57804663,57805882,57806915,57808165,57808390,57809274,57810109,57811399,57814311,57815394,57816297	57762046,57791673,57794081,57795729,57796992,57802196,57803804,57804780,57806035,57806983,57808292,57808540,57809466,57810223,57811486,57814373,57815500,57819178	Gene ID= ENSG00000198561.13 TPM= 4.41 Transcript Type= protein_coding
chr11	57761797	57819178	57761797	57819178	+	ENST00000529986.5@CTNND1	ENST00000529986.5	protein_coding	57761797,57794010,57795577,57796457,57801733,57803621,57804663,57805882,57806915,57808165,57808390,57809274,57810109,57811399,57814311,57815394,57816297	57762046,57794081,57795729,57796992,57802196,57803804,57804780,57806035,57806983,57808292,57808540,57809466,57810223,57811486,57814373,57815500,57819178	Gene ID= ENSG00000198561.13 TPM= 35.94 Transcript Type= protein_coding
chr11	57761797	57819178	57761797	57819178	+	ENST00000426142.6@CTNND1	ENST00000426142.6	protein_coding	57761797,57794010,57795577,57796457,57801733,57803621,57804663,57805882,57806915,57808165,57808390,57809274,57810109,57811399,57814311,57815394,57816297	57762119,57794081,57795729,57796992,57802196,57803804,57804780,57806035,57806983,57808292,57808540,57809466,57810223,57811486,57814373,57815500,57819178	Gene ID= ENSG00000198561.13 TPM= 13.75 Transcript Type= protein_coding
chr11	57761797	57819178	57761797	57819178	+	ENST00000532463.5@CTNND1	ENST00000532463.5	protein_coding	57761797,57794010,57795577,57796457,57801733,57803621,57804663,57805882,57806915,57808165,57808390,57809274,57810109,57811399,57814311,57815394,57816297	57762068,57794081,57795729,57796992,57802196,57803804,57804780,57806035,57806983,57808292,57808540,57809466,57810223,57811486,57814373,57815500,57819178	Gene ID= ENSG00000198561.13 TPM= 3.25 Transcript Type= protein_coding
chr11	57761797	57819178	57761797	57819178	+	ENST00000532245.5@CTNND1	ENST00000532245.5	protein_coding	57761797,57795577,57796457,57801733,57803621,57804663,57805882,57806915,57808165,57808390,57809274,57810109,57811399,57814311,57815394,57816297	57762046,57795729,57796992,57802196,57803804,57804780,57806035,57806983,57808292,57808540,57809466,57810223,57811486,57814373,57815500,57819178	Gene ID= ENSG00000198561.13 TPM= 10.25 Transcript Type= protein_coding
chr11	57761797	57819178	57761797	57819178	+	ENST00000526772.5@CTNND1	ENST00000526772.5	protein_coding	57761797,57801733,57803621,57804663,57805882,57806915,57808165,57808390,57809274,57810109,57811399,57814311,57815394,57816297	57762046,57802196,57803804,57804780,57806035,57806983,57808292,57808540,57809466,57810223,57811486,57814373,57815500,57819178	Gene ID= ENSG00000198561.13 TPM= 3.25 Transcript Type= protein_coding
chr11	57775022	57777752	57775022	57777752	-	transcript2911.chr11.nnic@NA	transcript2911.chr11.nnic	NA	57775022	57777752	Gene ID= novel_gene_chr11_2912 TPM= 3.5 Transcript Type= NA
chr11	57780058	57781585	57780058	57781585	-	transcript2913.chr11.nnic@NA	transcript2913.chr11.nnic	NA	57780058	57781585	Gene ID= novel_gene_chr11_2914 TPM= 2.34 Transcript Type= NA
chr11	57790554	57794610	57790554	57794610	-	transcript2915.chr11.nnic@NA	transcript2915.chr11.nnic	NA	57790554	57794610	Gene ID= novel_gene_chr11_2916 TPM= 31.53 Transcript Type= NA
chr11	58526871	58578166	58526871	58578166	-	ENST00000528954.5@LPXN	ENST00000528954.5	protein_coding	58578019,58570556,58564155,58554841,58551065,58549973,58549786,58528043,58526871	58578166,58570713,58564201,58554940,58551232,58550146,58549867,58528191,58527723	Gene ID= ENSG00000110031.12 TPM= 3.5 Transcript Type= protein_coding
chr11	58526871	58575861	58526871	58575861	-	ENST00000395074.6@LPXN	ENST00000395074.6	protein_coding	58575760,58570556,58564155,58554841,58551065,58549973,58549786,58528043,58526871	58575861,58570713,58564201,58554940,58551232,58550146,58549867,58528191,58527723	Gene ID= ENSG00000110031.12 TPM= 19.85 Transcript Type= protein_coding
chr11	58579111	58621042	58579111	58621042	+	ENST00000316059.6@ZFP91	ENST00000316059.6	protein_coding	58579111,58584856,58609830,58610298,58610950,58611604,58612278,58612762,58614229,58616716,58617196	58579622,58584884,58610039,58610334,58611054,58611738,58612328,58612840,58614343,58616815,58621042	Gene ID= ENSG00000186660.14 TPM= 14.01 Transcript Type= protein_coding
chr11	59133978	59142792	59133978	59142792	-	transcript2947.chr11.nic@AP001258.1	transcript2947.chr11.nic	lincRNA	59142615,59139957,59136057,59133978	59142792,59140167,59136281,59135588	Gene ID= ENSG00000245571.6 TPM= 2.34 Transcript Type= NA
chr11	59142752	59155034	59142752	59155034	+	transcript2931.chr11.nnic@FAM111A	transcript2931.chr11.nnic	protein_coding	59142752,59143083,59143497,59145827,59148797,59151750	59142969,59143304,59143695,59145856,59148953,59155034	Gene ID= ENSG00000166801.15 TPM= 7.59 Transcript Type= NA
chr11	59142851	59155034	59142851	59155034	+	transcript2935.chr11.nnic@FAM111A	transcript2935.chr11.nnic	protein_coding	59142851,59143083,59143497,59148844,59151750	59142969,59143304,59143695,59148953,59155034	Gene ID= ENSG00000166801.15 TPM= 4.09 Transcript Type= NA
chr11	59142855	59155034	59142855	59155034	+	transcript2936.chr11.nic@FAM111A	transcript2936.chr11.nic	protein_coding	59142855,59143083,59145827,59148797,59151750	59142969,59143304,59145856,59148953,59155034	Gene ID= ENSG00000166801.15 TPM= 7.59 Transcript Type= NA
chr11	59142748	59155039	59142748	59155039	+	ENST00000528737.5@FAM111A	ENST00000528737.5	protein_coding	59142748,59143083,59143497,59148836,59151750	59142946,59143304,59145856,59148953,59155039	Gene ID= ENSG00000166801.15 TPM= 3.5 Transcript Type= protein_coding
chr11	59142853	59155034	59142853	59155034	+	transcript2942.chr11.nic@FAM111A	transcript2942.chr11.nic	protein_coding	59142853,59143083,59148797,59151750	59142969,59145856,59148953,59155034	Gene ID= ENSG00000166801.15 TPM= 10.51 Transcript Type= NA
chr11	59142845	59155034	59142845	59155034	+	ENST00000420244.5@FAM111A	ENST00000420244.5	protein_coding	59142845,59143083,59145827,59148836,59151750	59142969,59143304,59145856,59148953,59155034	Gene ID= ENSG00000166801.15 TPM= 6.42 Transcript Type= protein_coding
chr11	59192020	59208170	59192020	59208170	+	transcript2954.chr11.nic@DTX4	transcript2954.chr11.nic	protein_coding	59192020,59195208,59199684,59204676	59192250,59195369,59199773,59208170	Gene ID= ENSG00000110042.7 TPM= 66.55 Transcript Type= NA
chr11	59208510	59212951	59208510	59212951	-	ENST00000361050.3@MPEG1	ENST00000361050.3	protein_coding	59208510	59212951	Gene ID= ENSG00000197629.5 TPM= 16.35 Transcript Type= protein_coding
chr11	59574398	59616144	59574398	59616144	-	ENST00000263847.5@OSBP	ENST00000263847.5	protein_coding	59615303,59610381,59608484,59601640,59601283,59600819,59600496,59594010,59593604,59581451,59580174,59578149,59576805,59574398	59616144,59610589,59608734,59601838,59601385,59600873,59600627,59594255,59593724,59581554,59580269,59578330,59577025,59576719	Gene ID= ENSG00000110048.11 TPM= 129.31 Transcript Type= protein_coding
chr11	59636716	59668980	59636716	59668980	-	ENST00000300146.9@PATL1	ENST00000300146.9	protein_coding	59668881,59666853,59659252,59658866,59657530,59656499,59655956,59655523,59653983,59652838,59652464,59651544,59650754,59649462,59647754,59642880,59639292,59639048,59636716	59668980,59666964,59659469,59658946,59657724,59656600,59656045,59655740,59654072,59653018,59652587,59651641,59650813,59649610,59647913,59643035,59639383,59639197,59638411	Gene ID= ENSG00000166889.13 TPM= 5.84 Transcript Type= protein_coding
chr11	59755375	59802706	59755375	59802706	+	transcript2987.chr11.nnic@STX3	transcript2987.chr11.nnic	protein_coding	59755375,59773211,59787037,59788873,59790519,59792107,59793099,59793380,59795372,59797283,59800778	59755635,59773294,59787136,59788947,59790586,59792215,59793172,59793514,59795482,59797396,59802706	Gene ID= ENSG00000166900.16 TPM= 14.4 Transcript Type= NA
chr11	59755377	59802701	59755377	59802701	+	transcript2992.chr11.nic@STX3	transcript2992.chr11.nic	protein_coding	59755377,59773211,59787037,59788873,59790519,59792107,59793099,59793380,59795372,59797283	59755635,59773294,59787136,59788947,59790586,59792215,59793172,59793514,59795482,59802701	Gene ID= ENSG00000166900.16 TPM= 7.01 Transcript Type= NA
chr11	59755116	59802706	59755116	59802706	+	transcript2996.chr11.nic@STX3	transcript2996.chr11.nic	protein_coding	59755116,59773211,59787037,59788873,59790519,59792107,59793099,59793380,59797283,59800855	59755635,59773294,59787136,59788947,59790586,59792215,59793172,59793514,59797396,59802706	Gene ID= ENSG00000166900.16 TPM= 13.52 Transcript Type= NA
chr11	59755059	59802706	59755059	59802706	+	ENST00000337979.8@STX3	ENST00000337979.8	protein_coding	59755059,59773211,59787037,59788873,59790519,59792107,59793099,59793380,59795372,59797283,59800855	59755635,59773294,59787136,59788947,59790586,59792215,59793172,59793514,59795482,59797396,59802706	Gene ID= ENSG00000166900.16 TPM= 257.94 Transcript Type= protein_coding
chr11	59806135	59810872	59806135	59810872	-	ENST00000300151.4@MRPL16	ENST00000300151.4	protein_coding	59810604,59809855,59807701,59806135	59810872,59809920,59807849,59806832	Gene ID= ENSG00000166902.4 TPM= 71.22 Transcript Type= protein_coding
chr11	60172014	60183104	60172014	60183104	-	ENST00000528851.5@MS4A6A	ENST00000528851.5	protein_coding	60182978,60181581,60179831,60178260,60175402,60172014	60183104,60181741,60179965,60178316,60175611,60173129	Gene ID= ENSG00000110077.14 TPM= 4.67 Transcript Type= protein_coding
chr11	60280586	60308972	60280586	60308972	+	ENST00000337908.4@MS4A4A	ENST00000337908.4	protein_coding	60280586,60292225,60297197,60301001,60302559,60306100,60308107	60280716,60292384,60297325,60301057,60302717,60306201,60308972	Gene ID= ENSG00000110079.16 TPM= 16.35 Transcript Type= protein_coding
chr11	60378533	60395951	60378533	60395951	+	transcript3024.chr11.nic@MS4A7	transcript3024.chr11.nic	protein_coding	60378533,60383129,60385088,60386717,60389390,60392685,60393787	60378616,60383288,60385222,60386773,60389596,60392786,60395951	Gene ID= ENSG00000166927.12 TPM= 6.42 Transcript Type= NA
chr11	60378533	60395948	60378533	60395948	+	transcript3031.chr11.nic@MS4A7	transcript3031.chr11.nic	protein_coding	60378533,60383129,60385088,60386717,60389390,60393787	60378664,60383288,60385222,60386773,60389596,60395948	Gene ID= ENSG00000166927.12 TPM= 3.5 Transcript Type= NA
chr11	60378485	60395951	60378485	60395951	+	ENST00000358246.5@MS4A7	ENST00000358246.5	protein_coding	60378485,60383129,60386717,60389390,60392685,60393787	60378664,60383288,60386773,60389596,60392786,60395951	Gene ID= ENSG00000166927.12 TPM= 45.54 Transcript Type= protein_coding
chr11	60455809	60470752	60455809	60470752	+	ENST00000345732.8@MS4A1	ENST00000345732.8	protein_coding	60455809,60462359,60463002,60464288,60465921,60466959,60468250	60455945,60462533,60463121,60464344,60466157,60467060,60470752	Gene ID= ENSG00000156738.17 TPM= 1.17 Transcript Type= protein_coding
chr11	60756959	60776732	60756959	60776732	+	transcript3063.chr11.nnic@MS4A15	transcript3063.chr11.nnic	protein_coding	60756959,60763720,60767533,60771291,60773392,60773837,60775605	60757058,60763958,60767655,60771347,60773484,60773950,60776732	Gene ID= ENSG00000166961.14 TPM= 20.28 Transcript Type= NA
chr11	60756960	60776733	60756960	60776733	+	transcript3073.chr11.nnic@MS4A15	transcript3073.chr11.nnic	protein_coding	60756960,60771291,60773392,60773837,60775605	60757058,60771347,60773484,60773847,60776733	Gene ID= ENSG00000166961.14 TPM= 9.34 Transcript Type= NA
chr11	60756867	60776732	60756867	60776732	+	transcript3074.chr11.nnic@MS4A15	transcript3074.chr11.nnic	protein_coding	60756867,60771291,60773392,60773837,60775605	60757058,60771347,60773484,60773950,60776732	Gene ID= ENSG00000166961.14 TPM= 58.43 Transcript Type= NA
chr11	60757008	60776731	60757008	60776731	+	ENST00000405633.3@MS4A15	ENST00000405633.3	protein_coding	60757008,60763706,60767533,60771291,60773392,60773837,60775605	60757058,60763958,60767655,60771347,60773484,60773950,60776731	Gene ID= ENSG00000166961.14 TPM= 69.13 Transcript Type= protein_coding
chr11	60757003	60776731	60757003	60776731	+	ENST00000337911.8@MS4A15	ENST00000337911.8	protein_coding	60757003,60767567,60771291,60773392,60773837,60775605	60757058,60767655,60771347,60773484,60773950,60776731	Gene ID= ENSG00000166961.14 TPM= 22.43 Transcript Type= protein_coding
chr11	60842071	60851081	60842071	60851081	+	ENST00000227520.9@CCDC86	ENST00000227520.9	protein_coding	60842071,60847924,60849940,60850206	60842882,60848053,60850014,60851081	Gene ID= ENSG00000110104.11 TPM= 47.87 Transcript Type= protein_coding
chr11	60850940	60855971	60850940	60855971	-	ENST00000332539.4@PTGDR2	ENST00000332539.4	protein_coding	60855869,60850940	60855971,60853731	Gene ID= ENSG00000183134.4 TPM= 9.34 Transcript Type= protein_coding
chr11	60913874	60923443	60913874	60923443	+	ENST00000227525.7@TMEM109	ENST00000227525.7	protein_coding	60913874,60919686,60920886,60921774	60914268,60919930,60920988,60923443	Gene ID= ENSG00000110108.9 TPM= 319.92 Transcript Type= protein_coding
chr11	60924460	60937142	60924460	60937142	+	transcript3092.chr11.nic@TMEM132A	transcript3092.chr11.nic	protein_coding	60924460,60927204,60927641,60928629,60930510,60931686,60931984,60933542,60934488,60935252	60924733,60927418,60927859,60928960,60930659,60931884,60932127,60933744,60934764,60937142	Gene ID= ENSG00000006118.14 TPM= 4.67 Transcript Type= NA
chr11	60924481	60937159	60924481	60937159	+	ENST00000005286.8@TMEM132A	ENST00000005286.8	protein_coding	60924481,60927204,60927641,60928629,60930510,60931686,60931984,60933542,60934488,60935252,60935864	60924733,60927418,60927859,60928960,60930659,60931884,60932127,60933744,60934764,60935443,60937159	Gene ID= ENSG00000006118.14 TPM= 36.2 Transcript Type= protein_coding
chr11	60937084	60951785	60937084	60951785	-	ENST00000227880.7@SLC15A3	ENST00000227880.7	protein_coding	60950994,60946532,60943689,60942035,60941122,60939480,60937870,60937084	60951785,60946821,60943836,60942145,60941290,60939638,60938025,60937373	Gene ID= ENSG00000110446.10 TPM= 99.25 Transcript Type= protein_coding
chr11	60937084	60951646	60937084	60951646	-	ENST00000541505.5@SLC15A3	ENST00000541505.5	protein_coding	60950994,60946532,60943689,60942035,60939480,60937870,60937084	60951646,60946821,60943836,60942145,60939638,60938025,60937373	Gene ID= ENSG00000110446.10 TPM= 29.19 Transcript Type= nonsense_mediated_decay
chr11	60971680	61020377	60971680	61020377	+	ENST00000313421.11@CD6	ENST00000313421.11	protein_coding	60971680,61006574,61007560,61008534,61009572,61011070,61013423,61013919,61015713,61017479,61017759,61018289,61019254	60971914,61006642,61007910,61008845,61009874,61011135,61013563,61014014,61015835,61017550,61018013,61018393,61020377	Gene ID= ENSG00000013725.14 TPM= 7.01 Transcript Type= protein_coding
chr11	61102395	61127852	61102395	61127852	+	ENST00000347785.7@CD5	ENST00000347785.7	protein_coding	61102395,61115056,61118175,61118915,61119234,61121611,61122907,61123884,61125032,61125751,61126288	61102615,61115094,61118480,61118977,61119575,61121904,61123032,61123937,61125151,61125841,61127852	Gene ID= ENSG00000110448.10 TPM= 4.67 Transcript Type= protein_coding
chr11	61130256	61161670	61130256	61161670	-	transcript3113.chr11.nnic@VPS37C	transcript3113.chr11.nnic	protein_coding	61161391,61134036,61133255,61130256	61161670,61134207,61133337,61132539	Gene ID= ENSG00000167987.10 TPM= 4.67 Transcript Type= NA
chr11	61130256	61161617	61130256	61161617	-	ENST00000301765.9@VPS37C	ENST00000301765.9	protein_coding	61161391,61138737,61134036,61133255,61130256	61161617,61138835,61134207,61133337,61132539	Gene ID= ENSG00000167987.10 TPM= 36.2 Transcript Type= protein_coding
chr11	61143970	61147472	61143970	61147472	-	transcript3118.chr11.nnic@NA	transcript3118.chr11.nnic	NA	61143970	61147472	Gene ID= novel_gene_chr11_3119 TPM= 2.34 Transcript Type= NA
chr11	61157719	61159720	61157719	61159720	+	transcript3116.chr11.nnic@NA	transcript3116.chr11.nnic	NA	61157719	61159720	Gene ID= novel_gene_chr11_3117 TPM= 5.84 Transcript Type= NA
chr11	61165759	61167402	61165759	61167402	-	transcript3120.chr11.nnic@NA	transcript3120.chr11.nnic	NA	61165759	61167402	Gene ID= novel_gene_chr11_3121 TPM= 21.02 Transcript Type= NA
chr11	61299451	61333366	61299451	61333366	-	ENST00000301764.11@DDB1	ENST00000301764.11	protein_coding	61332908,61331543,61329958,61329363,61326779,61325611,61323979,61323011,61322296,61321595,61316492,61316285,61314308,61314047,61313862,61313499,61311989,61311784,61310295,61309796,61308983,61303865,61303046,61302582,61302257,61300809,61299451	61333366,61331691,61330074,61329584,61326893,61325708,61324137,61323094,61322412,61321697,61316567,61316393,61314486,61314210,61313969,61313706,61312084,61311895,61310418,61309960,61309077,61304035,61303155,61302751,61302359,61300932,61300219	Gene ID= ENSG00000167986.13 TPM= 293.07 Transcript Type= protein_coding
chr11	61333210	61349242	61333210	61349242	+	ENST00000394900.7@TKFC	ENST00000394900.7	protein_coding	61333210,61334620,61337941,61339066,61339254,61341436,61341823,61342461,61342574,61342755,61343342,61343856,61344136,61345260,61345462,61345712,61345857,61346351	61333329,61334731,61338130,61339176,61339435,61341514,61341912,61342495,61342658,61342844,61343458,61343975,61344273,61345366,61345565,61345745,61345946,61349242	Gene ID= ENSG00000149476.15 TPM= 9.34 Transcript Type= protein_coding
chr11	61348805	61362274	61348805	61362274	-	transcript3160.chr11.nic@CYB561A3	transcript3160.chr11.nic	protein_coding	61361733,61356530,61353784,61352985,61350991,61348805	61362274,61356728,61353992,61353139,61351147,61350422	Gene ID= ENSG00000162144.9 TPM= 6.42 Transcript Type= NA
chr11	61348745	61362299	61348745	61362299	-	ENST00000294072.8@CYB561A3	ENST00000294072.8	protein_coding	61361733,61357733,61356530,61353784,61352985,61350991,61348745	61362299,61357828,61356728,61353992,61353139,61351147,61350422	Gene ID= ENSG00000162144.9 TPM= 17.51 Transcript Type= protein_coding
chr11	61348838	61361913	61348838	61361913	-	ENST00000447532.6@CYB561A3	ENST00000447532.6	protein_coding	61361733,61357733,61356530,61353784,61352985,61350991,61348838	61361913,61357828,61356728,61353992,61353139,61351147,61349643	Gene ID= ENSG00000162144.9 TPM= 15.18 Transcript Type= protein_coding
chr11	61362373	61369211	61362373	61369211	+	transcript3157.chr11.nic@TMEM138	transcript3157.chr11.nic	protein_coding	61362373,61364252,61364433,61366045,61367923,61368597	61362420,61364315,61364518,61366216,61367998,61369211	Gene ID= ENSG00000149483.11 TPM= 2.34 Transcript Type= NA
chr11	61362375	61369211	61362375	61369211	+	transcript3164.chr11.nic@TMEM138	transcript3164.chr11.nic	protein_coding	61362375,61364252,61366045,61367923,61368252	61362420,61364518,61366216,61367998,61369211	Gene ID= ENSG00000149483.11 TPM= 2.34 Transcript Type= NA
chr11	61362374	61373403	61362374	61373403	+	transcript3167.chr11.nnic@TMEM138	transcript3167.chr11.nnic	protein_coding	61362374,61364252,61366045,61367923,61373043	61362420,61364518,61366216,61367998,61373403	Gene ID= ENSG00000149483.11 TPM= 2.34 Transcript Type= NA
chr11	61366473	61369526	61366473	61369526	-	transcript3176.chr11.nnic@NA	transcript3176.chr11.nnic	NA	61366473	61369526	Gene ID= novel_gene_chr11_3177 TPM= 2.34 Transcript Type= NA
chr11	61392360	61398863	61392360	61398863	+	ENST00000334888.9@TMEM216	ENST00000334888.9	protein_coding	61392360,61393231,61393884,61397774,61398261	61392665,61393332,61393976,61397975,61398863	Gene ID= ENSG00000187049.9 TPM= 9.34 Transcript Type= protein_coding
chr11	61402649	61430031	61402649	61430031	-	ENST00000394888.8@CPSF7	ENST00000394888.8	protein_coding	61429914,61429182,61421390,61420470,61419922,61416105,61415666,61411769,61410938,61402649	61430031,61429290,61421608,61420573,61420094,61416519,61415784,61411937,61411105,61404704	Gene ID= ENSG00000149532.15 TPM= 5.84 Transcript Type= protein_coding
chr11	61402731	61430014	61402731	61430014	-	ENST00000439958.7@CPSF7	ENST00000439958.7	protein_coding	61429914,61429182,61421390,61420470,61419949,61416105,61415666,61411769,61410938,61402731	61430014,61429290,61421608,61420573,61420094,61416519,61415784,61411937,61411105,61404704	Gene ID= ENSG00000149532.15 TPM= 15.18 Transcript Type= protein_coding
chr11	61430119	61473540	61430119	61473540	+	transcript3199.chr11.nnic@AP003108.2	transcript3199.chr11.nnic	protein_coding	61430119,61437625,61438004,61468631,61472745	61430182,61437848,61438113,61468714,61473540	Gene ID= ENSG00000256591.5 TPM= 2.34 Transcript Type= NA
chr11	61430049	61473540	61430049	61473540	+	transcript3200.chr11.nnic@AP003108.2	transcript3200.chr11.nnic	protein_coding	61430049,61437625,61438004,61468664,61472745	61430182,61437848,61438113,61468714,61473540	Gene ID= ENSG00000256591.5 TPM= 2.34 Transcript Type= NA
chr11	61430105	61446697	61430105	61446697	+	ENST00000542074.1@SDHAF2	ENST00000542074.1	protein_coding	61430105,61445941	61430182,61446697	Gene ID= ENSG00000167985.6 TPM= 7.01 Transcript Type= protein_coding
chr11	61441889	61443544	61441889	61443544	-	transcript3212.chr11.nnic@NA	transcript3212.chr11.nnic	NA	61441889	61443544	Gene ID= novel_gene_chr11_3213 TPM= 3.5 Transcript Type= NA
chr11	61515313	61581148	61515313	61581148	-	ENST00000263846.8@SYT7	ENST00000263846.8	protein_coding	61580790,61556104,61551384,61532989,61527915,61524363,61523827,61523075,61515313	61581148,61556207,61551463,61533124,61528185,61524532,61523941,61523274,61518731	Gene ID= ENSG00000011347.9 TPM= 10.51 Transcript Type= protein_coding
chr11	61783844	61788518	61783844	61788518	+	transcript3227.chr11.nic@MYRF	transcript3227.chr11.nic	protein_coding	61783844,61784280,61785800,61786063	61783925,61784385,61785874,61788518	Gene ID= ENSG00000124920.13 TPM= 47.29 Transcript Type= NA
chr11	61752621	61768151	61752621	61768151	+	transcript3228.chr11.nic@MYRF	transcript3228.chr11.nic	protein_coding	61752621,61765625,61765958	61752790,61765712,61768151	Gene ID= ENSG00000124920.13 TPM= 5.84 Transcript Type= NA
chr11	61752649	61788518	61752649	61788518	+	ENST00000278836.9@MYRF	ENST00000278836.9	protein_coding	61752649,61765625,61765958,61769260,61770246,61771500,61771829,61773967,61776056,61776322,61776787,61777264,61777734,61778380,61779263,61779498,61779842,61780222,61780712,61780960,61781138,61781573,61783498,61783851,61784280,61785800,61786063	61752790,61765712,61766221,61769321,61770525,61771750,61771952,61774162,61776132,61776432,61776877,61777464,61777845,61778489,61779423,61779570,61779930,61780290,61780792,61781045,61781329,61781824,61783600,61783925,61784385,61785874,61788518	Gene ID= ENSG00000124920.13 TPM= 42.62 Transcript Type= protein_coding
chr11	61789130	61792594	61789130	61792594	-	ENST00000545210.5@TMEM258	ENST00000545210.5	protein_coding	61792556,61790375,61789785,61789130	61792594,61790602,61789990,61789235	Gene ID= ENSG00000134825.15 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr11	61792637	61797244	61792637	61797244	+	ENST00000305885.2@FEN1	ENST00000305885.2	protein_coding	61792637,61795341	61793028,61797244	Gene ID= ENSG00000168496.3 TPM= 31.53 Transcript Type= protein_coding
chr11	61816256	61867354	61816256	61867354	+	ENST00000257261.10@FADS2	ENST00000257261.10	protein_coding	61816256,61837778,61840334,61840624,61848159,61857011,61857454,61862972,61863282,61863707,61865152,61865638	61816426,61837888,61840531,61840725,61848284,61857071,61857530,61863069,61863378,61863786,61865277,61867354	Gene ID= ENSG00000134824.13 TPM= 43.2 Transcript Type= protein_coding
chr11	61827761	61867354	61827761	61867354	+	ENST00000278840.8@FADS2	ENST00000278840.8	protein_coding	61827761,61837778,61840334,61840624,61848159,61857011,61857454,61862972,61863282,61863707,61865152,61865638	61828597,61837888,61840531,61840725,61848284,61857071,61857530,61863069,61863378,61863786,61865277,61867354	Gene ID= ENSG00000134824.13 TPM= 109.75 Transcript Type= protein_coding
chr11	61799625	61817162	61799625	61817162	-	ENST00000350997.11@FADS1	ENST00000350997.11	protein_coding	61816555,61813243,61812471,61810974,61810751,61806664,61804685,61803670,61803363,61803032,61802801,61799625	61817162,61813353,61812668,61811075,61810879,61806724,61804761,61803767,61803459,61803111,61802926,61802462	Gene ID= ENSG00000149485.18 TPM= 136.61 Transcript Type= protein_coding
chr11	61873526	61891545	61873526	61891545	-	transcript3272.chr11.nnic@FADS3	transcript3272.chr11.nnic	protein_coding	61891169,61880041,61879312,61878746,61878512,61878155,61877411,61876359,61876111,61875851,61873526	61891545,61880151,61879509,61878847,61878634,61878215,61877587,61876963,61876190,61875976,61873865	Gene ID= ENSG00000221968.8 TPM= 23.55 Transcript Type= NA
chr11	61873526	61891616	61873526	61891616	-	transcript3273.chr11.nic@FADS3	transcript3273.chr11.nic	protein_coding	61891169,61880041,61879312,61878746,61878512,61878155,61877511,61876359,61876111,61875851,61873526	61891616,61880151,61879509,61878847,61878634,61878215,61877587,61876963,61876190,61875976,61873865	Gene ID= ENSG00000221968.8 TPM= 63.25 Transcript Type= NA
chr11	61873526	61891616	61873526	61891616	-	transcript3280.chr11.nic@FADS3	transcript3280.chr11.nic	protein_coding	61891169,61880041,61879312,61878746,61878512,61878155,61876359,61876111,61875851,61873526	61891616,61880151,61879509,61878847,61878634,61878215,61877587,61876190,61875976,61873865	Gene ID= ENSG00000221968.8 TPM= 33.12 Transcript Type= NA
chr11	61875384	61891616	61875384	61891616	-	transcript3283.chr11.nic@FADS3	transcript3283.chr11.nic	protein_coding	61891169,61880041,61878746,61875384	61891616,61880151,61879509,61878634	Gene ID= ENSG00000221968.8 TPM= 8.17 Transcript Type= NA
chr11	61873526	61891534	61873526	61891534	-	ENST00000278829.6@FADS3	ENST00000278829.6	protein_coding	61891169,61880041,61879312,61878746,61878512,61878155,61877511,61876866,61876359,61876111,61875851,61873526	61891534,61880151,61879509,61878847,61878634,61878215,61877587,61876963,61876455,61876190,61875976,61873865	Gene ID= ENSG00000221968.8 TPM= 151.99 Transcript Type= protein_coding
chr11	61897301	61917525	61897301	61917525	-	ENST00000394836.6@RAB3IL1	ENST00000394836.6	protein_coding	61917357,61908054,61907565,61907393,61906466,61904754,61904546,61902442,61899314,61897301	61917525,61908306,61907660,61907470,61906684,61904882,61904658,61902541,61899380,61898360	Gene ID= ENSG00000167994.11 TPM= 18.68 Transcript Type= protein_coding
chr11	61955220	61964076	61955220	61964076	+	transcript3291.chr11.nic@BEST1	transcript3291.chr11.nic	protein_coding	61955220,61955718,61956844,61957387,61958146,61959498,61959892,61962255	61955387,61955951,61956998,61957464,61958501,61959578,61960043,61964076	Gene ID= ENSG00000167995.15 TPM= 5.84 Transcript Type= NA
chr11	61964566	61967631	61964566	61967631	-	ENST00000620041.4@FTH1	ENST00000620041.4	protein_coding	61967548,61967312,61965369,61964987,61964566	61967631,61967453,61965515,61965112,61964891	Gene ID= ENSG00000167996.15 TPM= 64.71 Transcript Type= protein_coding
chr11	61964566	61967630	61964566	61967630	-	transcript3305.chr11.nnic@FTH1	transcript3305.chr11.nnic	protein_coding	61967527,61967312,61965369,61964987,61964566	61967630,61967485,61965515,61965112,61964891	Gene ID= ENSG00000167996.15 TPM= 432.5 Transcript Type= NA
chr11	61964566	61967633	61964566	61967633	-	ENST00000534180.1@FTH1	ENST00000534180.1	protein_coding	61967312,61965369,61964987,61964566	61967633,61965577,61965112,61964891	Gene ID= ENSG00000167996.15 TPM= 27.99 Transcript Type= nonsense_mediated_decay
chr11	61964566	61967631	61964566	61967631	-	ENST00000532829.5@FTH1	ENST00000532829.5	protein_coding	61967312,61965369,61964987,61964566	61967631,61965515,61965105,61964891	Gene ID= ENSG00000167996.15 TPM= 4224.14 Transcript Type= nonsense_mediated_decay
chr11	62337448	62393412	62337448	62393412	+	ENST00000415229.6@ASRGL1	ENST00000415229.6	protein_coding	62337448,62337890,62356325,62356987,62389133,62391522,62392079	62337574,62338167,62356467,62357144,62389251,62391632,62393412	Gene ID= ENSG00000162174.12 TPM= 10.89 Transcript Type= protein_coding
chr11	62337453	62393406	62337453	62393406	+	ENST00000301776.9@ASRGL1	ENST00000301776.9	protein_coding	62337453,62337967,62356325,62356987,62389133,62391522,62392079	62337574,62338167,62356467,62357144,62389251,62391632,62393406	Gene ID= ENSG00000162174.12 TPM= 20.23 Transcript Type= protein_coding
chr11	62337453	62393412	62337453	62393412	+	transcript3336.chr11.nic@ASRGL1	transcript3336.chr11.nic	protein_coding	62337453,62337994,62356325,62356987,62389133,62391522,62392079	62337574,62338167,62356467,62357144,62389251,62391632,62393412	Gene ID= ENSG00000162174.12 TPM= 6.22 Transcript Type= NA
chr11	62337430	62393412	62337430	62393412	+	transcript3342.chr11.nnic@ASRGL1	transcript3342.chr11.nnic	protein_coding	62337430,62337967,62356987,62389133,62391500,62392079	62337574,62338167,62357144,62389251,62391632,62393412	Gene ID= ENSG00000162174.12 TPM= 4.67 Transcript Type= NA
chr11	62337430	62392585	62337430	62392585	+	transcript3348.chr11.nic@ASRGL1	transcript3348.chr11.nic	protein_coding	62337430,62337967,62356325,62356987,62389133	62337574,62338167,62356467,62357144,62392585	Gene ID= ENSG00000162174.12 TPM= 4.67 Transcript Type= NA
chr11	62337430	62392585	62337430	62392585	+	transcript3351.chr11.nic@ASRGL1	transcript3351.chr11.nic	protein_coding	62337430,62337967,62356987,62389133,62392079	62337574,62338167,62357144,62391632,62392585	Gene ID= ENSG00000162174.12 TPM= 4.67 Transcript Type= NA
chr11	62337430	62357204	62337430	62357204	+	transcript3358.chr11.nic@ASRGL1	transcript3358.chr11.nic	protein_coding	62337430,62337967,62356987	62337574,62338167,62357204	Gene ID= ENSG00000162174.12 TPM= 3.5 Transcript Type= NA
chr11	62337430	62340111	62337430	62340111	+	transcript3359.chr11.nic@ASRGL1	transcript3359.chr11.nic	protein_coding	62337430,62337967	62337574,62340111	Gene ID= ENSG00000162174.12 TPM= 2.34 Transcript Type= NA
chr11	62337493	62392568	62337493	62392568	+	ENST00000628829.2@ASRGL1	ENST00000628829.2	protein_coding	62337493,62337967,62356987,62389133,62391522,62392079	62337574,62338167,62357144,62389251,62391632,62392568	Gene ID= ENSG00000162174.12 TPM= 2.34 Transcript Type= protein_coding
chr11	62337495	62357201	62337495	62357201	+	ENST00000534571.5@ASRGL1	ENST00000534571.5	protein_coding	62337495,62337967,62356325,62356987	62337574,62338167,62356467,62357201	Gene ID= ENSG00000162174.12 TPM= 5.84 Transcript Type= protein_coding
chr11	62419035	62423195	62419035	62423195	+	ENST00000278282.2@SCGB1A1	ENST00000278282.2	protein_coding	62419035,62422221,62423059	62419150,62422408,62423195	Gene ID= ENSG00000149021.6 TPM= 12.84 Transcript Type= protein_coding
chr11	62433546	62546796	62433546	62546796	-	ENST00000257247.11@AHNAK	ENST00000257247.11	protein_coding	62546660,62536469,62535945,62535003,62491732,62433546	62546796,62536567,62536098,62535190,62491831,62433891	Gene ID= ENSG00000124942.13 TPM= 12.84 Transcript Type= protein_coding
chr11	62515905	62546835	62515905	62546835	-	ENST00000378024.8@AHNAK	ENST00000378024.8	protein_coding	62546660,62536469,62535945,62535003,62515905	62546835,62536567,62536098,62535190,62534074	Gene ID= ENSG00000124942.13 TPM= 717.49 Transcript Type= protein_coding
chr11	62559601	62573973	62559601	62573973	-	ENST00000329251.4@EEF1G	ENST00000329251.4	protein_coding	62573831,62572584,62571838,62571540,62570965,62567399,62566806,62560282,62560069,62559601	62573973,62572742,62571901,62571682,62571108,62567528,62567010,62560454,62560193,62559837	Gene ID= ENSG00000254772.9 TPM= 1756.59 Transcript Type= protein_coding
chr11	62559603	62573860	62559603	62573860	-	ENST00000525340.5@EEF1G	ENST00000525340.5	protein_coding	62572584,62571838,62571540,62570965,62567399,62566806,62560282,62560069,62559603	62573860,62571901,62571682,62571108,62567528,62567010,62560454,62560193,62559837	Gene ID= ENSG00000254772.9 TPM= 26.5 Transcript Type= retained_intron
chr11	62559603	62577321	62559603	62577321	-	ENST00000526409.5@AP002990.1	ENST00000526409.5	protein_coding	62577182,62576907,62576657,62574677,62572584,62571838,62571540,62570965,62567399,62566806,62560282,62560069,62559603	62577321,62577017,62576749,62574908,62572742,62571901,62571682,62571108,62567528,62567010,62560454,62560193,62559837	Gene ID= ENSG00000255508.7 TPM= 18.62 Transcript Type= retained_intron
chr11	62593214	62601840	62593214	62601840	-	ENST00000278823.6@MTA2	ENST00000278823.6	protein_coding	62601423,62600622,62600166,62598522,62598327,62598024,62597610,62597316,62596637,62596458,62596279,62596010,62595752,62595264,62594981,62594516,62594259,62593214	62601840,62600689,62600259,62598639,62598390,62598141,62597712,62597415,62596825,62596532,62596337,62596107,62595891,62595492,62595070,62594634,62594407,62594040	Gene ID= ENSG00000149480.6 TPM= 18.68 Transcript Type= protein_coding
chr11	62602218	62612775	62602218	62612775	-	transcript3413.chr11.nic@EML3	transcript3413.chr11.nic	protein_coding	62612436,62611425,62611087,62610879,62609629,62609354,62608962,62608736,62608542,62608201,62607666,62606958,62606063,62605855,62605642,62605113,62604113,62603944,62603729,62603149,62602759,62602218	62612775,62611596,62611347,62610992,62609696,62609477,62609132,62608805,62608652,62608296,62607821,62607099,62606214,62605980,62605773,62605180,62604201,62604041,62603816,62603247,62602779,62602678	Gene ID= ENSG00000149499.11 TPM= 8.09 Transcript Type= NA
chr11	62602218	62612762	62602218	62612762	-	transcript3425.chr11.nic@EML3	transcript3425.chr11.nic	protein_coding	62612436,62611425,62611087,62610879,62609629,62609354,62608962,62608736,62608542,62608201,62607666,62606958,62606063,62605855,62605642,62605113,62604113,62603944,62603729,62602759,62602218	62612762,62611596,62611344,62610992,62609696,62609477,62609132,62608805,62608652,62608296,62607821,62607099,62606214,62605980,62605773,62605180,62604201,62604041,62603816,62603247,62602678	Gene ID= ENSG00000149499.11 TPM= 13.54 Transcript Type= NA
chr11	62602218	62612765	62602218	62612765	-	ENST00000394773.6@EML3	ENST00000394773.6	protein_coding	62612436,62611425,62611087,62610879,62609629,62609354,62608962,62608736,62608542,62608201,62607666,62606958,62606063,62605855,62605642,62605113,62604113,62603944,62603729,62603149,62602759,62602218	62612765,62611596,62611344,62610992,62609696,62609477,62609132,62608805,62608652,62608296,62607821,62607099,62606214,62605980,62605773,62605180,62604201,62604041,62603816,62603247,62602889,62602678	Gene ID= ENSG00000149499.11 TPM= 111.42 Transcript Type= protein_coding
chr11	62602219	62612524	62602219	62612524	-	ENST00000278845.8@EML3	ENST00000278845.8	protein_coding	62612436,62611425,62611087,62610879,62609629,62609354,62608962,62608736,62608542,62608201,62607666,62606958,62606063,62605855,62605642,62605113,62604113,62603944,62603729,62603149,62602759,62602219	62612524,62611596,62611347,62610992,62609696,62609477,62609132,62608805,62608652,62608296,62607821,62607099,62606214,62605980,62605773,62605180,62604201,62604041,62603816,62603247,62602889,62602678	Gene ID= ENSG00000149499.11 TPM= 15.68 Transcript Type= protein_coding
chr11	62602220	62612530	62602220	62612530	-	ENST00000529309.5@EML3	ENST00000529309.5	protein_coding	62612436,62611425,62611087,62610879,62609629,62609354,62608962,62608736,62608542,62608201,62607666,62606958,62606063,62605855,62605642,62605113,62604113,62603944,62603729,62603149,62602759,62602220	62612530,62611596,62611344,62610992,62609696,62609477,62609132,62608805,62608652,62608296,62607821,62607099,62606214,62605980,62605773,62605180,62604201,62604041,62603816,62603247,62602779,62602678	Gene ID= ENSG00000149499.11 TPM= 6.92 Transcript Type= protein_coding
chr11	62612741	62615120	62612741	62615120	+	ENST00000278833.3@ROM1	ENST00000278833.3	protein_coding	62612741,62614258,62614621	62613871,62614504,62615120	Gene ID= ENSG00000149489.8 TPM= 1.17 Transcript Type= protein_coding
chr11	62615296	62622175	62615296	62622175	-	ENST00000265471.9@B3GAT3	ENST00000265471.9	protein_coding	62621866,62620497,62616987,62616506,62615296	62622175,62620671,62617347,62616796,62615799	Gene ID= ENSG00000149541.9 TPM= 57.21 Transcript Type= protein_coding
chr11	62615297	62622154	62615297	62622154	-	ENST00000531383.5@B3GAT3	ENST00000531383.5	protein_coding	62621866,62620497,62616987,62616506,62615297	62622154,62620671,62617347,62616796,62616236	Gene ID= ENSG00000149541.9 TPM= 15.76 Transcript Type= protein_coding
chr11	62615296	62618204	62615296	62618204	-	transcript3480.chr11.nic@B3GAT3	transcript3480.chr11.nic	protein_coding	62616506,62615296	62618204,62616240	Gene ID= ENSG00000149541.9 TPM= 7.59 Transcript Type= NA
chr11	62624826	62646615	62624826	62646615	-	ENST00000346178.8@GANAB	ENST00000346178.8	protein_coding	62646562,62639627,62639359,62638983,62634821,62634310,62633445,62633184,62633005,62632565,62631030,62630601,62630379,62630197,62629814,62629588,62629194,62628769,62627289,62627048,62626860,62626571,62626335,62626065,62624826	62646615,62639731,62639467,62639110,62635000,62634375,62633514,62633271,62633101,62632745,62631183,62630836,62630505,62630276,62629957,62629684,62629295,62629012,62627353,62627124,62626934,62626684,62626447,62626165,62625924	Gene ID= ENSG00000089597.16 TPM= 129.6 Transcript Type= protein_coding
chr11	62625059	62646616	62625059	62646616	-	ENST00000356638.7@GANAB	ENST00000356638.7	protein_coding	62646562,62639627,62639359,62638983,62634821,62633445,62633184,62633005,62632565,62631030,62630601,62630379,62630197,62629814,62629588,62629194,62628769,62627289,62627048,62626860,62626571,62626335,62626065,62625059	62646616,62639731,62639467,62639110,62635000,62633514,62633271,62633101,62632745,62631183,62630836,62630505,62630276,62629957,62629684,62629295,62629012,62627353,62627124,62626934,62626684,62626447,62626165,62625924	Gene ID= ENSG00000089597.16 TPM= 30.36 Transcript Type= protein_coding
chr11	62646848	62653302	62646848	62653302	-	ENST00000330574.2@INTS5	ENST00000330574.2	protein_coding	62653170,62646848	62653302,62649999	Gene ID= ENSG00000185085.2 TPM= 61.88 Transcript Type= protein_coding
chr11	62662816	62665217	62662816	62665217	-	ENST00000524958.5@C11orf98	ENST00000524958.5	protein_coding	62665131,62664849,62663236,62662816	62665217,62664973,62663333,62663159	Gene ID= ENSG00000278615.4 TPM= 45.77 Transcript Type= protein_coding
chr11	62662817	62665181	62662817	62665181	-	ENST00000532786.2@C11orf98	ENST00000532786.2	protein_coding	62664849,62663236,62662817	62665181,62663333,62663159	Gene ID= ENSG00000278615.4 TPM= 4.9 Transcript Type= retained_intron
chr11	62662817	62671769	62662817	62671769	-	ENST00000354588.7@LBHD1	ENST00000354588.7	protein_coding	62671564,62669882,62669641,62667523,62664849,62663236,62662817	62671769,62670041,62669803,62667747,62664973,62663333,62663159	Gene ID= ENSG00000162194.12 TPM= 1.4 Transcript Type= protein_coding
chr11	62662817	62670876	62662817	62670876	-	transcript3460.chr11.nic@LBHD1	transcript3460.chr11.nic	protein_coding	62669882,62669641,62667523,62664849,62663236,62662817	62670876,62669803,62667747,62664973,62663333,62663159	Gene ID= ENSG00000162194.12 TPM= 2.57 Transcript Type= NA
chr11	62662818	62671765	62662818	62671765	-	ENST00000431002.6@LBHD1	ENST00000431002.6	protein_coding	62669641,62667523,62664849,62663236,62662818	62671765,62667747,62664973,62663333,62663159	Gene ID= ENSG00000162194.12 TPM= 2.57 Transcript Type= protein_coding
chr11	62665309	62668108	62665309	62668108	+	ENST00000532971.1@METTL12	ENST00000532971.1	protein_coding	62665309,62665647,62666396	62665332,62665946,62668108	Gene ID= ENSG00000214756.7 TPM= 3.5 Transcript Type= protein_coding
chr11	62665313	62668496	62665313	62668496	+	ENST00000529868.1@METTL12	ENST00000529868.1	protein_coding	62665313,62665647	62665332,62668496	Gene ID= ENSG00000214756.7 TPM= 5.84 Transcript Type= retained_intron
chr11	62665336	62665711	62665336	62665711	+	ENST00000594728.1@METTL12	ENST00000594728.1	protein_coding	62665336	62665711	Gene ID= ENSG00000214756.7 TPM= 2.34 Transcript Type= processed_transcript
chr11	62671654	62673687	62671654	62673687	+	ENST00000377953.3@UQCC3	ENST00000377953.3	protein_coding	62671654,62671953	62671865,62673687	Gene ID= ENSG00000204922.4 TPM= 3.5 Transcript Type= protein_coding
chr11	62676498	62679090	62676498	62679090	-	ENST00000301935.9@UBXN1	ENST00000301935.9	protein_coding	62678865,62678690,62678495,62678339,62677927,62677781,62677518,62676813,62676498	62679090,62678743,62678601,62678408,62678118,62677832,62677634,62677005,62676639	Gene ID= ENSG00000162191.13 TPM= 199.37 Transcript Type= protein_coding
chr11	62676517	62679067	62676517	62679067	-	ENST00000525717.5@UBXN1	ENST00000525717.5	protein_coding	62678865,62678690,62678495,62678339,62677927,62677518,62676813,62676517	62679067,62678743,62678601,62678408,62678118,62677832,62677005,62676639	Gene ID= ENSG00000162191.13 TPM= 11.68 Transcript Type= retained_intron
chr11	62690276	62706315	62690276	62706315	-	ENST00000278893.11@BSCL2	ENST00000278893.11	protein_coding	62706203,62705301,62702468,62694568,62692663,62692376,62691075,62690787,62690612,62690276	62706315,62705617,62702549,62694711,62692797,62692473,62691141,62690867,62690692,62690521	Gene ID= ENSG00000168000.14 TPM= 3.15 Transcript Type= protein_coding
chr11	62690295	62706344	62690295	62706344	-	ENST00000407022.7@BSCL2	ENST00000407022.7	protein_coding	62706203,62705301,62702468,62694568,62692663,62692376,62691280,62691075,62690787,62690612,62690295	62706344,62705617,62702549,62694711,62692797,62692473,62691421,62691141,62690867,62690692,62690521	Gene ID= ENSG00000168000.14 TPM= 48.69 Transcript Type= protein_coding
chr11	62690275	62709514	62690275	62709514	-	ENST00000405837.5@BSCL2	ENST00000405837.5	protein_coding	62709147,62707109,62705301,62702468,62694568,62692663,62692376,62691280,62691075,62690787,62690612,62690275	62709514,62707324,62705617,62702549,62694711,62692797,62692473,62691421,62691141,62690873,62690692,62690521	Gene ID= ENSG00000168000.14 TPM= 23.59 Transcript Type= protein_coding
chr11	62690315	62706344	62690315	62706344	-	ENST00000421906.5@BSCL2	ENST00000421906.5	protein_coding	62706259,62705301,62702468,62694568,62692663,62692376,62691280,62691075,62690787,62690612,62690315	62706344,62705617,62702549,62694711,62692797,62692473,62691421,62691141,62690867,62690692,62690521	Gene ID= ENSG00000168000.14 TPM= 10.74 Transcript Type= protein_coding
chr11	62690295	62706234	62690295	62706234	-	ENST00000403550.5@BSCL2	ENST00000403550.5	protein_coding	62705916,62705301,62702468,62694568,62692663,62692376,62691280,62691075,62690787,62690612,62690295	62706234,62705617,62702549,62694711,62692797,62692473,62691421,62691141,62690867,62690692,62690521	Gene ID= ENSG00000168000.14 TPM= 2.57 Transcript Type= protein_coding
chr11	62715047	62727581	62715047	62727581	-	transcript3491.chr11.nnic@HNRNPUL2-BSCL2	transcript3491.chr11.nnic	protein_coding	62726619,62724291,62723914,62723587,62722813,62722601,62722117,62721820,62721295,62720023,62716989,62715864,62715518,62715047	62727581,62724426,62723990,62723726,62722903,62722713,62722380,62721942,62721423,62720191,62717189,62715937,62715607,62715123	Gene ID= ENSG00000234857.2 TPM= 7.01 Transcript Type= NA
chr11	62728060	62738636	62728060	62738636	+	transcript3519.chr11.nic@TTC9C	transcript3519.chr11.nic	protein_coding	62728060,62728823,62735382,62738288	62728227,62729086,62735564,62738636	Gene ID= ENSG00000162222.13 TPM= 2.34 Transcript Type= NA
chr11	62728539	62738636	62728539	62738636	+	ENST00000316461.8@TTC9C	ENST00000316461.8	protein_coding	62728539,62735382,62738288	62729086,62735564,62738636	Gene ID= ENSG00000162222.13 TPM= 9.34 Transcript Type= protein_coding
chr11	62750963	62754188	62750963	62754188	-	ENST00000394807.3@ZBTB3	ENST00000394807.3	protein_coding	62753964,62750963	62754188,62753715	Gene ID= ENSG00000185670.7 TPM= 4.67 Transcript Type= protein_coding
chr11	62761544	62766710	62761544	62766710	+	ENST00000301788.11@POLR2G	ENST00000301788.11	protein_coding	62761544,62761795,62762867,62765182,62765340,62765653,62766243,62766494	62761660,62761904,62763026,62765232,62765405,62765724,62766276,62766710	Gene ID= ENSG00000168002.11 TPM= 28.02 Transcript Type= protein_coding
chr11	62761617	62766710	62761617	62766710	+	ENST00000531944.5@POLR2G	ENST00000531944.5	protein_coding	62761617,62761795,62765182,62765340,62765653,62766243,62766494	62761660,62762866,62765232,62765405,62765724,62766276,62766710	Gene ID= ENSG00000168002.11 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr11	62771303	62787342	62771303	62787342	+	ENST00000294168.7@TAF6L	ENST00000294168.7	protein_coding	62771303,62775771,62776384,62777978,62778285,62778869,62781894,62782113,62782693,62786260,62786517	62771490,62775930,62776470,62778128,62778335,62778963,62781968,62782333,62782825,62786388,62787342	Gene ID= ENSG00000162227.7 TPM= 38.3 Transcript Type= protein_coding
chr11	62771365	62787342	62771365	62787342	+	transcript3539.chr11.nnic@TAF6L	transcript3539.chr11.nnic	protein_coding	62771365,62775771,62776384,62777978,62778285,62781894,62782113,62782456,62782693,62786260,62786517	62771490,62775930,62776470,62778128,62778963,62781968,62782333,62782519,62782825,62786388,62787342	Gene ID= ENSG00000162227.7 TPM= 5.6 Transcript Type= NA
chr11	62771365	62787342	62771365	62787342	+	transcript3546.chr11.nic@TAF6L	transcript3546.chr11.nic	protein_coding	62771365,62775771,62776384,62777978,62778285,62778869,62781894,62782113,62786260,62786517	62771490,62775930,62776470,62778128,62778335,62778963,62781968,62782825,62786388,62787342	Gene ID= ENSG00000162227.7 TPM= 4.44 Transcript Type= NA
chr11	62771365	62787342	62771365	62787342	+	transcript3547.chr11.nic@TAF6L	transcript3547.chr11.nic	protein_coding	62771365,62775771,62776384,62777978,62778285,62781894,62782113,62782693,62786260,62786517	62771490,62775930,62776470,62778128,62778963,62781968,62782333,62782825,62786388,62787342	Gene ID= ENSG00000162227.7 TPM= 12.61 Transcript Type= NA
chr11	62771365	62787342	62771365	62787342	+	transcript3551.chr11.nic@TAF6L	transcript3551.chr11.nic	protein_coding	62771365,62775771,62776384,62777978,62778285,62781894,62782113,62786260,62786517	62771490,62775930,62776470,62778128,62778963,62781968,62782825,62786388,62787342	Gene ID= ENSG00000162227.7 TPM= 9.11 Transcript Type= NA
chr11	62789971	62792021	62789971	62792021	-	ENST00000307366.7@TMEM223	ENST00000307366.7	protein_coding	62791679,62789971	62792021,62790915	Gene ID= ENSG00000168569.7 TPM= 19.85 Transcript Type= protein_coding
chr11	62786023	62786785	62786023	62786785	-	ENST00000601484.2@AP001160.3	ENST00000601484.2	antisense_RNA	62786023	62786785	Gene ID= ENSG00000269176.2 TPM= 1.17 Transcript Type= antisense_RNA
chr11	62787427	62790405	62787427	62790405	+	ENST00000333449.8@TMEM179B	ENST00000333449.8	protein_coding	62787427,62789023,62789292,62789601,62789886	62787527,62789210,62789426,62789679,62790405	Gene ID= ENSG00000185475.10 TPM= 11.68 Transcript Type= protein_coding
chr11	62792126	62805440	62792126	62805440	-	transcript3528.chr11.nic@NXF1	transcript3528.chr11.nic	protein_coding	62805329,62803792,62803419,62802177,62801942,62801739,62801562,62801329,62801094,62800377,62798539,62797318,62797183,62796460,62796287,62796066,62795901,62794935,62794258,62792641,62792126	62805440,62803978,62803572,62802260,62802046,62801819,62801631,62801417,62801201,62800486,62798575,62797386,62797238,62796567,62796345,62796181,62795943,62795007,62794398,62792701,62792514	Gene ID= ENSG00000162231.13 TPM= 4.09 Transcript Type= NA
chr11	62792123	62805470	62792123	62805470	-	ENST00000531709.6@NXF1	ENST00000531709.6	protein_coding	62805329,62803792,62803419,62802177,62801942,62801739,62801562,62801329,62801094,62798539,62797318,62797183,62796460,62796287,62796066,62795901,62794935,62794258,62792641,62792123	62805470,62803978,62803572,62802260,62802046,62801819,62801631,62801417,62801201,62800486,62797386,62797238,62796567,62796345,62796181,62795943,62795007,62794440,62792701,62792514	Gene ID= ENSG00000162231.13 TPM= 54.29 Transcript Type= protein_coding
chr11	62792126	62805492	62792126	62805492	-	ENST00000294172.6@NXF1	ENST00000294172.6	protein_coding	62805329,62803792,62803419,62802177,62801942,62801739,62801562,62801329,62801094,62800377,62798539,62797318,62797183,62796460,62796287,62796066,62795901,62794935,62794258,62792641,62792126	62805492,62803978,62803572,62802260,62802046,62801819,62801631,62801417,62801201,62800486,62798575,62797386,62797238,62796567,62796345,62796181,62795943,62795007,62794440,62792701,62792514	Gene ID= ENSG00000162231.13 TPM= 18.68 Transcript Type= protein_coding
chr11	62806897	62832088	62806897	62832088	-	ENST00000294179.7@STX5	ENST00000294179.7	protein_coding	62831954,62831019,62827561,62827343,62827155,62825423,62825283,62825036,62824459,62824166,62806897	62832088,62831262,62827631,62827398,62827225,62825539,62825339,62825117,62824565,62824287,62807628	Gene ID= ENSG00000162236.11 TPM= 45.83 Transcript Type= protein_coding
chr11	62806897	62831686	62806897	62831686	-	transcript3549.chr11.nic@STX5	transcript3549.chr11.nic	protein_coding	62831019,62827561,62827343,62827155,62825423,62825283,62825036,62824459,62824166,62806897	62831686,62827631,62827398,62827225,62825539,62825339,62825117,62824565,62824287,62807628	Gene ID= ENSG00000162236.11 TPM= 7.3 Transcript Type= NA
chr11	62806897	62832088	62806897	62832088	-	transcript3552.chr11.nic@STX5	transcript3552.chr11.nic	protein_coding	62831954,62831019,62827561,62827343,62827155,62825423,62824459,62824166,62806897	62832088,62831262,62827631,62827398,62827225,62825539,62825339,62824287,62807628	Gene ID= ENSG00000162236.11 TPM= 4.96 Transcript Type= NA
chr11	62806925	62832042	62806925	62832042	-	ENST00000394690.5@STX5	ENST00000394690.5	protein_coding	62831954,62831019,62827561,62827343,62827155,62825423,62825283,62825036,62824459,62824166,62806925	62832042,62831110,62827631,62827398,62827225,62825539,62825339,62825117,62824565,62824287,62807628	Gene ID= ENSG00000162236.11 TPM= 4.67 Transcript Type= protein_coding
chr11	62806897	62832041	62806897	62832041	-	ENST00000377897.8@STX5	ENST00000377897.8	protein_coding	62831954,62831019,62827561,62827343,62827155,62825423,62825283,62825036,62824459,62824166,62806897	62832041,62831262,62827631,62827398,62827225,62825539,62825339,62825117,62824565,62824287,62807666	Gene ID= ENSG00000162236.11 TPM= 1.46 Transcript Type= protein_coding
chr11	62851988	62855886	62851988	62855886	-	transcript3573.chr11.nic@SNHG1	transcript3573.chr11.nic	processed_transcript	62855865,62855424,62855133,62854888,62854519,62854018,62853801,62853552,62853075,62852811,62851988	62855886,62855466,62855216,62854938,62854551,62854064,62853833,62853590,62853115,62852839,62852681	Gene ID= ENSG00000255717.6 TPM= 5.84 Transcript Type= NA
chr11	62880872	62888855	62880872	62888855	+	ENST00000338663.11@SLC3A2	ENST00000338663.11	protein_coding	62880872,62881893,62882908,62884457,62884632,62885177,62885465,62888135,62888331	62881447,62882066,62882999,62884525,62884690,62885357,62885608,62888218,62888855	Gene ID= ENSG00000168003.16 TPM= 447.19 Transcript Type= protein_coding
chr11	62881725	62888845	62881725	62888845	+	ENST00000536981.5@SLC3A2	ENST00000536981.5	protein_coding	62881725,62882908,62884457,62884632,62885177,62885465,62888135,62888331	62882066,62882999,62884525,62884690,62885357,62885608,62888218,62888845	Gene ID= ENSG00000168003.16 TPM= 24.52 Transcript Type= protein_coding
chr11	62908679	62921681	62908679	62921681	-	ENST00000306960.3@CHRM1	ENST00000306960.3	protein_coding	62921218,62908679	62921681,62911178	Gene ID= ENSG00000168539.3 TPM= 19.85 Transcript Type= protein_coding
chr11	62909546	62918361	62909546	62918361	+	ENST00000543624.1@AP000438.1	ENST00000543624.1	antisense_RNA	62909546,62910603,62917926	62909615,62910845,62918361	Gene ID= ENSG00000257002.1 TPM= 2.34 Transcript Type= antisense_RNA
chr11	63506102	63516709	63506102	63516709	+	ENST00000394618.7@LGALS12	ENST00000394618.7	protein_coding	63506102,63508553,63508778,63509778,63510463,63511079,63511752,63515563,63516247	63506527,63508641,63508991,63509897,63510501,63511105,63511840,63515713,63516709	Gene ID= ENSG00000133317.14 TPM= 2.34 Transcript Type= protein_coding
chr11	63536809	63546462	63536809	63546462	+	ENST00000537871.1@RARRES3	ENST00000537871.1	protein_coding	63536809,63544621,63546149	63536877,63544889,63546462	Gene ID= ENSG00000133321.10 TPM= 7.59 Transcript Type= processed_transcript
chr11	63536821	63546462	63536821	63546462	+	ENST00000255688.7@RARRES3	ENST00000255688.7	protein_coding	63536821,63539516,63544621,63546149	63536877,63539624,63544889,63546462	Gene ID= ENSG00000133321.10 TPM= 44.95 Transcript Type= protein_coding
chr11	63541197	63542277	63541197	63542277	-	transcript3624.chr11.nnic@NA	transcript3624.chr11.nnic	NA	63541197	63542277	Gene ID= novel_gene_chr11_3625 TPM= 2.34 Transcript Type= NA
chr11	63541616	63544334	63541616	63544334	-	transcript3626.chr11.nnic@NA	transcript3626.chr11.nnic	NA	63541616	63544334	Gene ID= novel_gene_chr11_3627 TPM= 2.34 Transcript Type= NA
chr11	63546181	63548594	63546181	63548594	+	transcript3622.chr11.nnic@NA	transcript3622.chr11.nnic	NA	63546181	63548594	Gene ID= novel_gene_chr11_3623 TPM= 2.34 Transcript Type= NA
chr11	63552770	63563383	63552770	63563383	-	ENST00000255695.1@HRASLS2	ENST00000255695.1	protein_coding	63563316,63560085,63558392,63552770	63563383,63560193,63558660,63553065	Gene ID= ENSG00000133328.3 TPM= 1.17 Transcript Type= protein_coding
chr11	63569748	63573113	63569748	63573113	-	transcript3640.chr11.nnic@NA	transcript3640.chr11.nnic	NA	63569748	63573113	Gene ID= novel_gene_chr11_3641 TPM= 5.84 Transcript Type= NA
chr11	63571809	63573642	63571809	63573642	+	transcript3638.chr11.nnic@NA	transcript3638.chr11.nnic	NA	63571809	63573642	Gene ID= novel_gene_chr11_3639 TPM= 2.34 Transcript Type= NA
chr11	63624087	63671612	63624087	63671612	-	ENST00000398868.7@ATL3	ENST00000398868.7	protein_coding	63671290,63659038,63658761,63652471,63651936,63646507,63644169,63643357,63636207,63635534,63633026,63631040,63624087	63671612,63659252,63658904,63652575,63651986,63646563,63644261,63643495,63636334,63635590,63633097,63631471,63629405	Gene ID= ENSG00000184743.12 TPM= 201.99 Transcript Type= protein_coding
chr11	63681450	63759891	63681450	63759891	+	ENST00000356000.7@RTN3	ENST00000356000.7	protein_coding	63681450,63704851,63749991,63752507,63753069,63753662,63756112,63758156	63681778,63704907,63750198,63752645,63753138,63753708,63756170,63759891	Gene ID= ENSG00000133318.13 TPM= 11.09 Transcript Type= protein_coding
chr11	63681446	63759882	63681446	63759882	+	ENST00000341307.6@RTN3	ENST00000341307.6	protein_coding	63681446,63749991,63752507,63753069,63753662,63758156	63681778,63750198,63752645,63753138,63753708,63759882	Gene ID= ENSG00000133318.13 TPM= 21.6 Transcript Type= protein_coding
chr11	63681500	63759885	63681500	63759885	+	ENST00000537981.5@RTN3	ENST00000537981.5	protein_coding	63681500,63749991,63752507,63753069,63753662,63756112,63758156	63681778,63750198,63752645,63753138,63753708,63756170,63759885	Gene ID= ENSG00000133318.13 TPM= 176.31 Transcript Type= protein_coding
chr11	63759895	63769459	63759895	63769459	-	transcript3658.chr11.nic@C11orf95	transcript3658.chr11.nic	protein_coding	63768484,63765807,63759895	63769459,63766304,63763869	Gene ID= ENSG00000188070.9 TPM= 23.35 Transcript Type= NA
chr11	63813388	63827718	63813388	63827718	+	ENST00000294244.8@C11orf84	ENST00000294244.8	protein_coding	63813388,63817805,63818216,63818527,63818802,63826928	63813813,63818134,63818365,63818652,63819002,63827718	Gene ID= ENSG00000168005.8 TPM= 8.17 Transcript Type= protein_coding
chr11	63839113	63909591	63839113	63909591	+	transcript3671.chr11.nic@MARK2	transcript3671.chr11.nic	protein_coding	63839113,63895159,63895580,63898232,63898608,63898763,63899052,63899874,63900559,63900780,63900957,63902198,63902604,63903061,63904786,63906088,63908260,63908877	63839560,63895338,63895633,63898280,63898673,63898833,63899108,63900110,63900678,63900879,63901069,63902330,63902782,63903158,63905043,63906114,63908304,63909591	Gene ID= ENSG00000072518.20 TPM= 6.42 Transcript Type= NA
chr11	63839114	63911020	63839114	63911020	+	transcript3678.chr11.nnic@MARK2	transcript3678.chr11.nnic	protein_coding	63839114,63895159,63895580,63898232,63898608,63898763,63899052,63899874,63900559,63900780,63900957,63902198,63902604,63910930	63839560,63895338,63895633,63898280,63898673,63898833,63899108,63900110,63900678,63900879,63901069,63902330,63902760,63911020	Gene ID= ENSG00000072518.20 TPM= 4.09 Transcript Type= NA
chr11	63938996	63957328	63938996	63957328	+	ENST00000377793.8@NAA40	ENST00000377793.8	protein_coding	63938996,63945840,63946951,63952238,63952407,63952756,63953972,63954338	63939102,63945935,63947003,63952333,63952565,63952839,63954049,63957328	Gene ID= ENSG00000110583.12 TPM= 17.51 Transcript Type= protein_coding
chr11	63974607	63976543	63974607	63976543	+	ENST00000314133.3@COX8A	ENST00000314133.3	protein_coding	63974607,63976225	63974794,63976543	Gene ID= ENSG00000176340.3 TPM= 119.09 Transcript Type= protein_coding
chr11	63986413	63998415	63986413	63998415	+	ENST00000538426.5@OTUB1	ENST00000538426.5	protein_coding	63986413,63988337,63988654,63996530,63996857,63997050,63997349	63986514,63988398,63988752,63996648,63996941,63997244,63998415	Gene ID= ENSG00000167770.11 TPM= 68.3 Transcript Type= protein_coding
chr11	63985853	63998411	63985853	63998411	+	ENST00000301453.7@OTUB1	ENST00000301453.7	protein_coding	63985853,63988337,63988654,63996530,63997050,63997349	63986514,63988398,63988752,63996941,63997244,63998411	Gene ID= ENSG00000167770.11 TPM= 40.28 Transcript Type= retained_intron
chr11	63999852	64007076	63999852	64007076	+	transcript3725.chr11.nnic@OTUB1	transcript3725.chr11.nnic	protein_coding	63999852,64001716,64006263	64001520,64001810,64007076	Gene ID= ENSG00000167770.11 TPM= 5.84 Transcript Type= NA
chr11	63998558	64166002	63998558	64166002	-	transcript3696.chr11.nic@MACROD1	transcript3696.chr11.nic	protein_coding	64165697,64152292,64151239,64015252,64000227,63999642,63999530,63999331,63998955,63998838,63998558	64166002,64152393,64151355,64015281,64000343,63999763,63999560,63999404,63999000,63998872,63998687	Gene ID= ENSG00000133315.10 TPM= 2.34 Transcript Type= NA
chr11	63998558	64166144	63998558	64166144	-	transcript3699.chr11.nic@MACROD1	transcript3699.chr11.nic	protein_coding	64165697,64152292,64151239,64015252,64000227,63999642,63999530,63998955,63998838,63998558	64166144,64152393,64151355,64015281,64000343,63999763,63999560,63999404,63998872,63998687	Gene ID= ENSG00000133315.10 TPM= 4.67 Transcript Type= NA
chr11	63998558	64166112	63998558	64166112	-	transcript3715.chr11.nic@MACROD1	transcript3715.chr11.nic	protein_coding	64165697,64152292,64151239,64015252,63998558	64166112,64152393,64151355,64015281,64000343	Gene ID= ENSG00000133315.10 TPM= 2.34 Transcript Type= NA
chr11	63998558	64166061	63998558	64166061	-	ENST00000255681.6@MACROD1	ENST00000255681.6	protein_coding	64165697,64152292,64151239,64015252,64000227,63999642,63999530,63999331,63998955,63998838,63998558	64166061,64152393,64151355,64015281,64000343,63999763,63999560,63999404,63999036,63998872,63998687	Gene ID= ENSG00000133315.10 TPM= 17.51 Transcript Type= protein_coding
chr11	64184890	64185700	64184890	64185700	-	transcript3727.chr11.nnic@NA	transcript3727.chr11.nnic	NA	64184890	64185700	Gene ID= novel_gene_chr11_3728 TPM= 2.34 Transcript Type= NA
chr11	64186154	64204543	64186154	64204543	+	transcript3747.chr11.nic@STIP1	transcript3747.chr11.nic	protein_coding	64186154,64193078,64194189,64194479,64195645,64197271,64197493,64197854,64199940,64200169,64202876,64203125,64203450	64186270,64193287,64194330,64194620,64195813,64197397,64197595,64197974,64200036,64200293,64202912,64203228,64204543	Gene ID= ENSG00000168439.16 TPM= 15.18 Transcript Type= NA
chr11	64186115	64204543	64186115	64204543	+	ENST00000305218.8@STIP1	ENST00000305218.8	protein_coding	64186115,64193078,64194189,64194479,64195645,64197271,64197493,64197854,64199940,64200169,64202876,64203125,64203450,64204054	64186270,64193287,64194330,64194620,64195813,64197397,64197595,64197974,64200036,64200293,64202912,64203228,64203622,64204543	Gene ID= ENSG00000168439.16 TPM= 187.98 Transcript Type= protein_coding
chr11	64206683	64223848	64206683	64223848	+	transcript3741.chr11.nic@FERMT3	transcript3741.chr11.nic	protein_coding	64206683,64207351,64210611,64211052,64211275,64211645,64219251,64219524,64219740,64219891,64220220,64221016,64223048,64223313	64206814,64207524,64210844,64211171,64211443,64211747,64219358,64219658,64219789,64220015,64220669,64221140,64223189,64223848	Gene ID= ENSG00000149781.12 TPM= 5.45 Transcript Type= NA
chr11	64206734	64223886	64206734	64223886	+	ENST00000345728.9@FERMT3	ENST00000345728.9	protein_coding	64206734,64207351,64210611,64211052,64211275,64211645,64219251,64219524,64219740,64219891,64220220,64220436,64221016,64223048,64223313	64206814,64207524,64210844,64211171,64211443,64211747,64219358,64219658,64219789,64220015,64220326,64220669,64221140,64223189,64223886	Gene ID= ENSG00000149781.12 TPM= 84.85 Transcript Type= protein_coding
chr11	64206734	64223882	64206734	64223882	+	ENST00000279227.9@FERMT3	ENST00000279227.9	protein_coding	64206734,64207351,64210611,64211052,64211275,64211645,64219251,64219524,64219740,64219879,64220220,64220436,64221016,64223048,64223313	64206814,64207524,64210844,64211171,64211443,64211747,64219358,64219658,64219789,64220015,64220326,64220669,64221140,64223189,64223882	Gene ID= ENSG00000149781.12 TPM= 12.46 Transcript Type= protein_coding
chr11	64213557	64214687	64213557	64214687	-	transcript3811.chr11.nnic@NA	transcript3811.chr11.nnic	NA	64213557	64214687	Gene ID= novel_gene_chr11_3812 TPM= 2.34 Transcript Type= NA
chr11	64223845	64226209	64223845	64226209	-	ENST00000317459.10@TRPT1	ENST00000317459.10	protein_coding	64226050,64225786,64225499,64224801,64224543,64224285,64224100,64223845	64226209,64225869,64225580,64224970,64224717,64224341,64224210,64223967	Gene ID= ENSG00000149743.13 TPM= 15.18 Transcript Type= protein_coding
chr11	64223845	64226211	64223845	64226211	-	transcript3778.chr11.nic@TRPT1	transcript3778.chr11.nic	protein_coding	64226050,64225786,64224801,64224543,64224285,64224100,64223845	64226211,64225869,64225580,64224717,64224341,64224210,64223967	Gene ID= ENSG00000149743.13 TPM= 5.84 Transcript Type= NA
chr11	64223799	64226150	64223799	64226150	-	ENST00000394547.7@TRPT1	ENST00000394547.7	protein_coding	64226050,64225499,64224801,64224543,64224285,64224100,64223799	64226150,64225580,64224970,64224717,64224341,64224210,64223967	Gene ID= ENSG00000149743.13 TPM= 7.01 Transcript Type= protein_coding
chr11	64223845	64226169	64223845	64226169	-	transcript3813.chr11.nnic@NA	transcript3813.chr11.nnic	NA	64223845	64226169	Gene ID= novel_gene_chr11_3814 TPM= 2.34 Transcript Type= NA
chr11	64226272	64234281	64226272	64234281	+	transcript3745.chr11.nic@NUDT22	transcript3745.chr11.nic	protein_coding	64226272,64226635,64227568,64229247,64229478,64229850,64230183,64230432,64231032,64231871,64232430,64232704,64233894,64234073	64226427,64227132,64227666,64229344,64229571,64230070,64230319,64230940,64231147,64231964,64232614,64232865,64233980,64234281	Gene ID= ENSG00000149761.8 TPM= 6.71 Transcript Type= NA
chr11	64226250	64234281	64226250	64234281	+	transcript3748.chr11.nic@NUDT22	transcript3748.chr11.nic	protein_coding	64226250,64226635,64227568,64229247,64229478,64229850,64230183,64230432,64231871,64232430,64232704,64233894,64234073	64226297,64227132,64227666,64229344,64229571,64230070,64230319,64230940,64231964,64232614,64232865,64233980,64234281	Gene ID= ENSG00000149761.8 TPM= 16.64 Transcript Type= NA
chr11	64226272	64234281	64226272	64234281	+	transcript3751.chr11.nic@NUDT22	transcript3751.chr11.nic	protein_coding	64226272,64226635,64227568,64229247,64229478,64229850,64230183,64230432,64231871,64232430,64232704,64233894,64234073	64226427,64227132,64227666,64229344,64229571,64230070,64230319,64230940,64231964,64232614,64232865,64233980,64234281	Gene ID= ENSG00000149761.8 TPM= 16.64 Transcript Type= NA
chr11	64226263	64230016	64226263	64230016	+	transcript3788.chr11.nic@NUDT22	transcript3788.chr11.nic	protein_coding	64226263,64227568,64229247,64229478,64229850	64227132,64227666,64229344,64229571,64230016	Gene ID= ENSG00000149761.8 TPM= 11.68 Transcript Type= NA
chr11	64226296	64230016	64226296	64230016	+	transcript3796.chr11.nic@NUDT22	transcript3796.chr11.nic	protein_coding	64226296,64229247,64229478,64229850	64227132,64229344,64229571,64230016	Gene ID= ENSG00000149761.8 TPM= 2.34 Transcript Type= NA
chr11	64226290	64230016	64226290	64230016	+	ENST00000279206.7@NUDT22	ENST00000279206.7	protein_coding	64226290,64226635,64227568,64229247,64229478,64229850	64226427,64227132,64227666,64229344,64229571,64230016	Gene ID= ENSG00000149761.8 TPM= 18.68 Transcript Type= protein_coding
chr11	64226290	64230007	64226290	64230007	+	ENST00000441250.6@NUDT22	ENST00000441250.6	protein_coding	64226290,64226635,64229247,64229478,64229850	64226427,64227132,64229344,64229571,64230007	Gene ID= ENSG00000149761.8 TPM= 3.5 Transcript Type= protein_coding
chr11	64226272	64234281	64226272	64234281	+	transcript3753.chr11.nic@DNAJC4	transcript3753.chr11.nic	protein_coding	64226272,64226635,64227568,64229247,64229478,64230183,64230432,64231032,64231871,64232430,64232704,64233894,64234073	64226427,64227132,64227666,64229344,64229571,64230319,64230940,64231147,64231964,64232614,64232865,64233980,64234281	Gene ID= ENSG00000110011.13 TPM= 5.55 Transcript Type= NA
chr11	64230758	64234281	64230758	64234281	+	ENST00000321460.5@DNAJC4	ENST00000321460.5	protein_coding	64230758,64231871,64232430,64232701,64233894	64230940,64231964,64232614,64232865,64234281	Gene ID= ENSG00000110011.13 TPM= 9.34 Transcript Type= protein_coding
chr11	64234538	64238793	64234538	64238793	+	ENST00000309422.6@VEGFB	ENST00000309422.6	protein_coding	64234538,64235458,64235813,64236254,64237187,64237420,64238356	64234893,64235500,64236009,64236327,64237222,64237655,64238793	Gene ID= ENSG00000173511.9 TPM= 193.62 Transcript Type= protein_coding
chr11	64234820	64238775	64234820	64238775	+	ENST00000426086.2@VEGFB	ENST00000426086.2	protein_coding	64234820,64235458,64235813,64236254,64237187,64237521,64238356	64234893,64235500,64236009,64236327,64237222,64237655,64238775	Gene ID= ENSG00000173511.9 TPM= 11.68 Transcript Type= protein_coding
chr11	64241616	64244132	64241616	64244132	+	transcript3836.chr11.nnic@FKBP2	transcript3836.chr11.nnic	protein_coding	64241616,64242384,64243199,64243451,64243841,64243968	64241661,64242558,64243311,64243497,64243876,64244132	Gene ID= ENSG00000173486.12 TPM= 10.31 Transcript Type= NA
chr11	64241004	64244124	64241004	64244124	+	ENST00000309366.8@FKBP2	ENST00000309366.8	protein_coding	64241004,64242384,64243199,64243451,64243841,64243968	64241132,64242558,64243311,64243497,64243876,64244124	Gene ID= ENSG00000173486.12 TPM= 67.52 Transcript Type= protein_coding
chr11	64241748	64244132	64241748	64244132	+	ENST00000394540.3@FKBP2	ENST00000394540.3	protein_coding	64241748,64242384,64243199,64243451,64243841,64243968	64242213,64242558,64243311,64243497,64243876,64244132	Gene ID= ENSG00000173486.12 TPM= 14.4 Transcript Type= protein_coding
chr11	64244484	64246941	64244484	64246941	-	ENST00000309318.7@PPP1R14B	ENST00000309318.7	protein_coding	64246416,64245204,64244930,64244484	64246941,64245287,64244962,64244822	Gene ID= ENSG00000173457.10 TPM= 85.23 Transcript Type= protein_coding
chr11	64251523	64267921	64251523	64267921	+	ENST00000279230.10@PLCB3	ENST00000279230.10	protein_coding	64251523,64254415,64254748,64254898,64255234,64255396,64255541,64255721,64256376,64256618,64258473,64258885,64259058,64260029,64261400,64261581,64261952,64262407,64262647,64263498,64263691,64264021,64264951,64265192,64265310,64265886,64266126,64266315,64266495,64267185,64267353	64251748,64254492,64254816,64255038,64255313,64255449,64255616,64255821,64256542,64256764,64258713,64258969,64259244,64260234,64261496,64261665,64262076,64262561,64262808,64263597,64263795,64264112,64265104,64265227,64265502,64266039,64266202,64266404,64266552,64267271,64267921	Gene ID= ENSG00000149782.11 TPM= 28.02 Transcript Type= protein_coding
chr11	64269830	64284639	64269830	64284639	-	ENST00000394532.7@BAD	ENST00000394532.7	protein_coding	64284182,64271613,64269830	64284639,64271803,64270337	Gene ID= ENSG00000002330.13 TPM= 12.26 Transcript Type= protein_coding
chr11	64269834	64284669	64269834	64284669	-	ENST00000309032.7@BAD	ENST00000309032.7	protein_coding	64284631,64284182,64271613,64269834	64284669,64284376,64271803,64270337	Gene ID= ENSG00000002330.13 TPM= 69.47 Transcript Type= protein_coding
chr11	64284801	64289494	64284801	64289494	+	transcript3819.chr11.nic@GPR137	transcript3819.chr11.nic	protein_coding	64284801,64286510,64286965,64287721,64288065,64288340,64288603,64289037	64285380,64286881,64287014,64287946,64288214,64288468,64288721,64289494	Gene ID= ENSG00000173264.14 TPM= 14.69 Transcript Type= NA
chr11	64284801	64289491	64284801	64289491	+	transcript3820.chr11.nic@GPR137	transcript3820.chr11.nic	protein_coding	64284801,64286510,64286965,64287721,64288065,64288340,64288603,64289143	64285380,64286881,64287014,64287946,64288214,64288468,64288721,64289491	Gene ID= ENSG00000173264.14 TPM= 3.5 Transcript Type= NA
chr11	64285543	64289494	64285543	64289494	+	transcript3821.chr11.nic@GPR137	transcript3821.chr11.nic	protein_coding	64285543,64286510,64286965,64287721,64288065,64288340,64288603,64289037	64285607,64286881,64287014,64287946,64288214,64288468,64288721,64289494	Gene ID= ENSG00000173264.14 TPM= 6.52 Transcript Type= NA
chr11	64285871	64289494	64285871	64289494	+	transcript3823.chr11.nnic@GPR137	transcript3823.chr11.nnic	protein_coding	64285871,64286510,64286965,64287721,64288065,64288340,64288603,64289037	64286234,64286881,64287014,64287946,64288214,64288468,64288721,64289494	Gene ID= ENSG00000173264.14 TPM= 6.52 Transcript Type= NA
chr11	64285855	64289494	64285855	64289494	+	transcript3840.chr11.nic@GPR137	transcript3840.chr11.nic	protein_coding	64285855,64286965,64288603,64289037	64286881,64288468,64288721,64289494	Gene ID= ENSG00000173264.14 TPM= 2.34 Transcript Type= NA
chr11	64285257	64289494	64285257	64289494	+	ENST00000377702.8@GPR137	ENST00000377702.8	protein_coding	64285257,64286510,64286965,64287721,64288340,64288603,64289037	64285380,64286881,64287014,64287946,64288468,64288721,64289494	Gene ID= ENSG00000173264.14 TPM= 1.46 Transcript Type= protein_coding
chr11	64286420	64289491	64286420	64289491	+	ENST00000313074.7@GPR137	ENST00000313074.7	protein_coding	64286420,64286965,64287721,64288065,64288340,64288603,64289143	64286881,64287014,64287946,64288214,64288468,64288721,64289491	Gene ID= ENSG00000173264.14 TPM= 4.67 Transcript Type= protein_coding
chr11	64291409	64300006	64291409	64300006	+	ENST00000422670.6@KCNK4	ENST00000422670.6	protein_coding	64291409,64292942,64296878,64297119,64297467,64298110,64299346	64291566,64293207,64297001,64297279,64297653,64298249,64300006	Gene ID= ENSG00000182450.12 TPM= 2.34 Transcript Type= protein_coding
chr11	64305523	64316743	64305523	64316743	+	transcript3852.chr11.nnic@ESRRA	transcript3852.chr11.nnic	protein_coding	64305523,64306296,64307168,64313951,64314239,64314741,64315001,64315707	64305736,64306448,64307504,64314067,64314367,64314911,64315270,64316743	Gene ID= ENSG00000173153.13 TPM= 7.2 Transcript Type= NA
chr11	64305491	64316743	64305491	64316743	+	transcript3854.chr11.nnic@ESRRA	transcript3854.chr11.nnic	protein_coding	64305491,64307168,64313854,64314239,64314741,64315001,64315707	64305736,64307504,64314067,64314367,64314911,64315270,64316743	Gene ID= ENSG00000173153.13 TPM= 6.81 Transcript Type= NA
chr11	64305490	64316743	64305490	64316743	+	transcript3863.chr11.nic@ESRRA	transcript3863.chr11.nic	protein_coding	64305490,64313951,64314239,64314741,64315001,64315707	64305736,64314067,64314367,64314911,64315270,64316743	Gene ID= ENSG00000173153.13 TPM= 9.14 Transcript Type= NA
chr11	64306227	64316743	64306227	64316743	+	ENST00000405666.5@ESRRA	ENST00000405666.5	protein_coding	64306227,64307168,64313951,64314239,64314741,64315001,64315707	64306448,64307504,64314067,64314367,64314911,64315270,64316743	Gene ID= ENSG00000173153.13 TPM= 30.56 Transcript Type= protein_coding
chr11	64305578	64316738	64305578	64316738	+	ENST00000000442.10@ESRRA	ENST00000000442.10	protein_coding	64305578,64307168,64313951,64314239,64314741,64315001,64315707	64305736,64307504,64314067,64314367,64314911,64315270,64316738	Gene ID= ENSG00000173153.13 TPM= 14.98 Transcript Type= protein_coding
chr11	64311984	64313909	64311984	64313909	-	transcript3881.chr11.nnic@NA	transcript3881.chr11.nnic	NA	64311984	64313909	Gene ID= novel_gene_chr11_3882 TPM= 4.67 Transcript Type= NA
chr11	64316691	64318084	64316691	64318084	-	ENST00000544844.5@TRMT112	ENST00000544844.5	protein_coding	64317449,64317264,64317058,64316691	64318084,64317365,64317147,64316968	Gene ID= ENSG00000173113.6 TPM= 133.11 Transcript Type= protein_coding
chr11	64316696	64317553	64316696	64317553	-	ENST00000539854.1@TRMT112	ENST00000539854.1	protein_coding	64317449,64317264,64316696	64317553,64317365,64317147	Gene ID= ENSG00000173113.6 TPM= 3.5 Transcript Type= protein_coding
chr11	64316695	64317558	64316695	64317558	-	ENST00000308774.6@TRMT112	ENST00000308774.6	protein_coding	64317449,64317264,64317058,64316695	64317558,64317365,64317132,64316968	Gene ID= ENSG00000173113.6 TPM= 7.01 Transcript Type= protein_coding
chr11	64318121	64321811	64318121	64321811	+	transcript3871.chr11.nnic@PRDX5	transcript3871.chr11.nnic	protein_coding	64318121,64320661,64320865,64321007,64321586	64318386,64320792,64320903,64321068,64321811	Gene ID= ENSG00000126432.13 TPM= 9.34 Transcript Type= NA
chr11	64318088	64321811	64318088	64321811	+	ENST00000265462.8@PRDX5	ENST00000265462.8	protein_coding	64318088,64319734,64320661,64320865,64321007,64321586	64318386,64319868,64320792,64320903,64321068,64321811	Gene ID= ENSG00000126432.13 TPM= 249.87 Transcript Type= protein_coding
chr11	64318163	64320296	64318163	64320296	+	transcript3879.chr11.nnic@NA	transcript3879.chr11.nnic	NA	64318163	64320296	Gene ID= novel_gene_chr11_3880 TPM= 2.34 Transcript Type= NA
chr11	64340201	64357525	64340201	64357525	+	transcript3883.chr11.nnic@CCDC88B	transcript3883.chr11.nnic	protein_coding	64340201,64340607,64340907,64341109,64341270,64341421,64341599,64341994,64342294,64342522,64343179,64343507,64343778,64343997,64349331,64349551,64351160,64351476,64352130,64352744,64353054,64353351,64353715,64354004,64354123,64355194,64355560,64357039	64340326,64340752,64341018,64341178,64341328,64341504,64341742,64342139,64342375,64342680,64343325,64343615,64343914,64345157,64349458,64349668,64351255,64351616,64352386,64352887,64353240,64353496,64353813,64354045,64354170,64355400,64355628,64357525	Gene ID= ENSG00000168071.21 TPM= 7.39 Transcript Type= NA
chr11	64340201	64357525	64340201	64357525	+	transcript3887.chr11.nic@CCDC88B	transcript3887.chr11.nic	protein_coding	64340201,64340607,64340907,64341109,64341270,64341421,64341599,64341994,64342294,64342522,64343179,64343507,64343778,64343997,64349331,64349551,64352130,64352744,64353054,64353351,64353715,64354004,64355194,64355560,64357039	64340326,64340752,64341018,64341178,64341328,64341504,64341742,64342139,64342375,64342680,64343325,64343615,64343914,64345157,64349458,64351616,64352386,64352887,64353240,64353496,64353813,64354170,64355400,64355628,64357525	Gene ID= ENSG00000168071.21 TPM= 7.39 Transcript Type= NA
chr11	64340223	64357534	64340223	64357534	+	ENST00000356786.9@CCDC88B	ENST00000356786.9	protein_coding	64340223,64340607,64340907,64341109,64341270,64341421,64341599,64341994,64342294,64342522,64343179,64343507,64343778,64343997,64349331,64349551,64351160,64351476,64352130,64352744,64353054,64353351,64353715,64354004,64355194,64355560,64357039	64340326,64340752,64341018,64341178,64341328,64341504,64341742,64342139,64342375,64342680,64343325,64343615,64343914,64345157,64349458,64349668,64351255,64351616,64352386,64352887,64353240,64353496,64353813,64354170,64355400,64355628,64357534	Gene ID= ENSG00000168071.21 TPM= 26.07 Transcript Type= protein_coding
chr11	64355343	64357531	64355343	64357531	+	ENST00000472524.1@CCDC88B	ENST00000472524.1	protein_coding	64355343,64357039	64355628,64357531	Gene ID= ENSG00000168071.21 TPM= 4.67 Transcript Type= processed_transcript
chr11	64359113	64372215	64359113	64372215	+	transcript3899.chr11.nic@RPS6KA4	transcript3899.chr11.nic	protein_coding	64359113,64359378,64360163,64360477,64361134,64361469,64361642,64361852,64365301,64368132,64368468,64368704,64369446,64369699,64371283	64359290,64359449,64360381,64360592,64361241,64361549,64361745,64362002,64365465,64368260,64368601,64368797,64369619,64370726,64372215	Gene ID= ENSG00000162302.12 TPM= 6.22 Transcript Type= NA
chr11	64359148	64372215	64359148	64372215	+	ENST00000528057.5@RPS6KA4	ENST00000528057.5	protein_coding	64359148,64359378,64360163,64360477,64361134,64361469,64361642,64361852,64365301,64368132,64368489,64368704,64369446,64369699,64370225,64370563,64371283	64359290,64359449,64360381,64360592,64361241,64361549,64361745,64362002,64365465,64368260,64368601,64368797,64369619,64369893,64370384,64370726,64372215	Gene ID= ENSG00000162302.12 TPM= 11.48 Transcript Type= protein_coding
chr11	64359171	64372215	64359171	64372215	+	ENST00000334205.8@RPS6KA4	ENST00000334205.8	protein_coding	64359171,64359378,64360163,64360477,64361134,64361469,64361642,64361852,64365301,64368132,64368468,64368704,64369446,64369699,64370225,64370563,64371283	64359290,64359449,64360381,64360592,64361241,64361549,64361745,64362002,64365465,64368260,64368601,64368797,64369619,64369893,64370384,64370726,64372215	Gene ID= ENSG00000162302.12 TPM= 37.16 Transcript Type= protein_coding
chr11	64726911	64744178	64726911	64744178	-	ENST00000394432.7@RASGRP2	ENST00000394432.7	protein_coding	64744003,64742794,64742010,64741439,64740948,64740013,64739636,64739360,64736753,64735903,64735542,64735112,64730053,64729762,64728863,64727296,64726911	64744178,64742937,64742112,64741501,64741079,64740163,64739809,64739476,64737034,64735980,64735664,64735227,64730194,64729798,64729042,64727360,64727131	Gene ID= ENSG00000068831.18 TPM= 5.25 Transcript Type= protein_coding
chr11	64726911	64744834	64726911	64744834	-	ENST00000377497.7@RASGRP2	ENST00000377497.7	protein_coding	64744742,64742794,64742010,64741439,64740948,64740013,64739636,64739360,64736753,64735903,64735542,64735112,64730053,64729762,64728863,64727296,64726911	64744834,64742937,64742112,64741501,64741079,64740163,64739809,64739476,64737034,64735980,64735664,64735227,64730194,64729798,64729042,64727360,64727131	Gene ID= ENSG00000068831.18 TPM= 5.25 Transcript Type= protein_coding
chr11	64740866	64745333	64740866	64745333	-	ENST00000377489.5@RASGRP2	ENST00000377489.5	protein_coding	64745275,64742794,64742010,64741439,64740866	64745333,64742937,64742112,64741501,64741079	Gene ID= ENSG00000068831.18 TPM= 1.17 Transcript Type= protein_coding
chr11	64731469	64735353	64731469	64735353	-	transcript3918.chr11.nnic@NA	transcript3918.chr11.nnic	NA	64731469	64735353	Gene ID= novel_gene_chr11_3919 TPM= 3.5 Transcript Type= NA
chr11	64746389	64760297	64746389	64760297	-	ENST00000164139.3@PYGM	ENST00000164139.3	protein_coding	64759656,64758603,64758437,64758246,64757779,64755447,64755273,64754693,64754253,64753879,64753519,64753073,64752403,64751924,64751597,64751325,64750376,64747224,64746921,64746389	64760297,64758704,64758515,64758349,64757910,64755558,64755355,64754836,64754345,64754025,64753682,64753187,64752504,64752071,64751655,64751466,64750583,64747358,64746987,64746808	Gene ID= ENSG00000068976.13 TPM= 5.84 Transcript Type= protein_coding
chr11	64764606	64778530	64764606	64778530	-	transcript3923.chr11.nic@SF1	transcript3923.chr11.nic	protein_coding	64778362,64777987,64776498,64773430,64770256,64769964,64769426,64769223,64769022,64768106,64767571,64767192,64766900,64764606	64778530,64778146,64776626,64773505,64770408,64770053,64769609,64769338,64769129,64768286,64767844,64767251,64767079,64765518	Gene ID= ENSG00000168066.20 TPM= 42.33 Transcript Type= NA
chr11	64764606	64778730	64764606	64778730	-	ENST00000377390.7@SF1	ENST00000377390.7	protein_coding	64778362,64776498,64773430,64770256,64769964,64769426,64769223,64769022,64768106,64767571,64767192,64766900,64764606	64778730,64776626,64773505,64770408,64770053,64769609,64769338,64769129,64768286,64767844,64767251,64767079,64766155	Gene ID= ENSG00000168066.20 TPM= 27.15 Transcript Type= protein_coding
chr11	64764606	64778786	64764606	64778786	-	ENST00000334944.9@SF1	ENST00000334944.9	protein_coding	64778362,64776498,64773430,64770256,64769964,64769426,64769223,64769022,64768106,64767571,64767192,64766900,64765951,64764606	64778786,64776626,64773505,64770408,64770053,64769609,64769338,64769129,64768286,64767844,64767251,64767079,64766155,64765518	Gene ID= ENSG00000168066.20 TPM= 6.13 Transcript Type= protein_coding
chr11	64776046	64778763	64776046	64778763	-	ENST00000463343.1@SF1	ENST00000463343.1	protein_coding	64778362,64776046	64778763,64776626	Gene ID= ENSG00000168066.20 TPM= 2.34 Transcript Type= retained_intron
chr11	64789137	64803219	64789137	64803219	-	transcript3939.chr11.nic@MAP4K2	transcript3939.chr11.nic	protein_coding	64802885,64802563,64802419,64802066,64801710,64801579,64801111,64800900,64800764,64800311,64800109,64799605,64799421,64798794,64797626,64797501,64797275,64797104,64796982,64796809,64796634,64796493,64796273,64792364,64792172,64791909,64790394,64790188,64789889,64789730,64789137	64803219,64802653,64802483,64802121,64801757,64801621,64801183,64801031,64800826,64800392,64800216,64799683,64799479,64798837,64797664,64797534,64797380,64797192,64797023,64796893,64796713,64796553,64796390,64792422,64792275,64792086,64790462,64790274,64789959,64789785,64789624	Gene ID= ENSG00000168067.11 TPM= 7.74 Transcript Type= NA
chr11	64789137	64803257	64789137	64803257	-	transcript3940.chr11.nic@MAP4K2	transcript3940.chr11.nic	protein_coding	64803054,64802885,64802563,64802419,64802066,64801710,64801579,64801111,64800764,64800311,64800109,64799605,64799421,64798794,64797626,64797501,64797275,64797104,64796982,64796809,64796634,64796493,64796273,64792364,64792172,64791909,64790394,64790188,64789889,64789730,64789137	64803257,64802942,64802653,64802483,64802121,64801757,64801621,64801183,64800826,64800392,64800216,64799683,64799479,64798837,64797664,64797534,64797380,64797192,64797023,64796893,64796713,64796553,64796390,64792422,64792275,64792086,64790462,64790274,64789959,64789785,64789624	Gene ID= ENSG00000168067.11 TPM= 6.56 Transcript Type= NA
chr11	64789137	64803257	64789137	64803257	-	transcript3941.chr11.nic@MAP4K2	transcript3941.chr11.nic	protein_coding	64803054,64802885,64802563,64802419,64802066,64801710,64801579,64801111,64800900,64800764,64800311,64800109,64799605,64799421,64798794,64797626,64797275,64797104,64796982,64796809,64796634,64796493,64796273,64792364,64792172,64791909,64790394,64790188,64789889,64789730,64789137	64803257,64802942,64802653,64802483,64802121,64801757,64801621,64801183,64801031,64800826,64800392,64800216,64799683,64799479,64798837,64797664,64797534,64797192,64797023,64796893,64796713,64796553,64796390,64792422,64792275,64792086,64790462,64790274,64789959,64789785,64789624	Gene ID= ENSG00000168067.11 TPM= 3.06 Transcript Type= NA
chr11	64789137	64803257	64789137	64803257	-	transcript3943.chr11.nnic@MAP4K2	transcript3943.chr11.nnic	protein_coding	64803054,64802885,64802563,64802419,64802066,64801710,64801579,64801111,64800900,64800764,64800311,64800109,64799605,64799421,64798794,64797626,64797501,64797275,64797104,64796982,64796809,64796634,64796493,64796273,64792364,64792172,64791909,64790188,64789889,64789730,64789137	64803257,64802942,64802653,64802483,64802121,64801757,64801621,64801183,64801031,64800826,64800392,64800216,64799683,64799479,64798837,64797664,64797534,64797380,64797192,64797023,64796893,64796713,64796553,64796390,64792422,64792275,64792086,64790274,64789959,64789785,64789624	Gene ID= ENSG00000168067.11 TPM= 4.81 Transcript Type= NA
chr11	64789137	64803193	64789137	64803193	-	transcript3946.chr11.nic@MAP4K2	transcript3946.chr11.nic	protein_coding	64803054,64802885,64802563,64802419,64802066,64801710,64801579,64801111,64800900,64800764,64800311,64800109,64799605,64799421,64798794,64797626,64797501,64797275,64797104,64796982,64796809,64796634,64796493,64796273,64791909,64790394,64790188,64789889,64789730,64789137	64803193,64802942,64802653,64802483,64802121,64801757,64801621,64801183,64801031,64800826,64800392,64800216,64799683,64799479,64798837,64797664,64797534,64797380,64797192,64797023,64796893,64796713,64796553,64796390,64792422,64790462,64790274,64789959,64789785,64789624	Gene ID= ENSG00000168067.11 TPM= 3.26 Transcript Type= NA
chr11	64789137	64803168	64789137	64803168	-	transcript3947.chr11.nnic@MAP4K2	transcript3947.chr11.nnic	protein_coding	64803054,64802885,64802563,64802419,64802066,64801710,64801579,64801111,64800764,64800311,64800109,64799605,64799421,64798794,64797626,64797501,64797275,64797104,64796982,64796809,64796634,64796493,64796273,64792364,64792172,64791909,64790188,64789889,64789730,64789137	64803168,64802942,64802653,64802483,64802121,64801757,64801621,64801183,64800826,64800392,64800216,64799683,64799479,64798837,64797664,64797534,64797380,64797192,64797023,64796893,64796713,64796553,64796390,64792422,64792275,64792086,64790274,64789959,64789785,64789624	Gene ID= ENSG00000168067.11 TPM= 2.48 Transcript Type= NA
chr11	64789137	64803257	64789137	64803257	-	transcript3950.chr11.nic@MAP4K2	transcript3950.chr11.nic	protein_coding	64803054,64802885,64802563,64802419,64802066,64801710,64801579,64801111,64800764,64800311,64800109,64799605,64799421,64798794,64797626,64797501,64797275,64797104,64796982,64796809,64796634,64796493,64796273,64791909,64790394,64790188,64789889,64789730,64789137	64803257,64802942,64802653,64802483,64802121,64801757,64801621,64801183,64800826,64800392,64800216,64799683,64799479,64798837,64797664,64797534,64797380,64797192,64797023,64796893,64796713,64796553,64796390,64792422,64790462,64790274,64789959,64789785,64789624	Gene ID= ENSG00000168067.11 TPM= 3.26 Transcript Type= NA
chr11	64789137	64803241	64789137	64803241	-	ENST00000377350.7@MAP4K2	ENST00000377350.7	protein_coding	64803054,64802885,64802563,64802419,64802066,64801710,64801579,64801111,64800900,64800764,64800311,64800109,64799605,64799421,64798794,64797626,64797501,64797275,64797104,64796982,64796809,64796634,64796493,64796273,64792364,64792172,64791909,64790394,64790188,64789889,64789730,64789137	64803241,64802942,64802653,64802483,64802121,64801757,64801621,64801183,64801031,64800826,64800392,64800216,64799683,64799479,64798837,64797664,64797534,64797380,64797168,64797023,64796893,64796713,64796553,64796390,64792422,64792275,64792086,64790462,64790274,64789959,64789785,64789624	Gene ID= ENSG00000168067.11 TPM= 3.84 Transcript Type= protein_coding
chr11	64803516	64810741	64803516	64810741	-	ENST00000315422.8@MEN1	ENST00000315422.8	protein_coding	64810268,64809665,64807891,64807552,64807179,64807011,64806232,64805635,64805034,64803516	64810741,64810132,64808099,64807680,64807219,64807098,64806368,64805770,64805198,64804816	Gene ID= ENSG00000133895.14 TPM= 17.51 Transcript Type= protein_coding
chr11	64803516	64810582	64803516	64810582	-	transcript3961.chr11.nic@MEN1	transcript3961.chr11.nic	protein_coding	64810526,64809665,64807891,64807552,64807179,64807011,64806232,64805635,64805034,64803516	64810582,64810132,64808099,64807680,64807219,64807098,64806368,64805770,64805198,64804816	Gene ID= ENSG00000133895.14 TPM= 23.35 Transcript Type= NA
chr11	64803516	64810608	64803516	64810608	-	ENST00000377326.7@MEN1	ENST00000377326.7	protein_coding	64809665,64807891,64807552,64807179,64807011,64806232,64805635,64805034,64803516	64810608,64808099,64807680,64807219,64807098,64806368,64805770,64805198,64804816	Gene ID= ENSG00000133895.14 TPM= 12.84 Transcript Type= protein_coding
chr11	64851642	64878719	64851642	64878719	-	ENST00000320631.7@EHD1	ENST00000320631.7	protein_coding	64878061,64874421,64859924,64855322,64851642	64878719,64874518,64860336,64855486,64854857	Gene ID= ENSG00000110047.17 TPM= 75.89 Transcript Type= protein_coding
chr11	64868676	64873756	64868676	64873756	+	transcript3978.chr11.nnic@NA	transcript3978.chr11.nnic	NA	64868676	64873756	Gene ID= novel_gene_chr11_3979 TPM= 2.34 Transcript Type= NA
chr11	64924684	64934473	64924684	64934473	+	transcript3989.chr11.nic@PPP2R5B	transcript3989.chr11.nic	protein_coding	64924684,64925848,64926712,64927802,64928066,64928295,64930322,64930481,64931436,64931559,64931749,64932765,64933145,64933697	64925028,64925933,64926908,64927903,64928158,64928425,64930381,64930589,64931489,64931609,64931868,64932892,64933246,64934473	Gene ID= ENSG00000068971.13 TPM= 3.5 Transcript Type= NA
chr11	64924655	64934473	64924655	64934473	+	transcript3990.chr11.nic@PPP2R5B	transcript3990.chr11.nic	protein_coding	64924655,64925471,64926712,64927802,64928066,64928295,64930322,64930481,64931436,64931749,64932765,64933145,64933697	64925028,64925933,64926908,64927903,64928158,64928425,64930381,64930589,64931609,64931868,64932892,64933246,64934473	Gene ID= ENSG00000068971.13 TPM= 11.68 Transcript Type= NA
chr11	64924671	64934473	64924671	64934473	+	ENST00000164133.6@PPP2R5B	ENST00000164133.6	protein_coding	64924671,64925471,64926712,64927802,64928066,64928295,64930322,64930481,64931436,64931559,64931749,64932765,64933145,64933697	64925028,64925933,64926908,64927903,64928158,64928425,64930381,64930589,64931489,64931609,64931868,64932892,64933246,64934473	Gene ID= ENSG00000068971.13 TPM= 61.88 Transcript Type= protein_coding
chr11	64987943	64997045	64987943	64997045	-	ENST00000301887.8@BATF2	ENST00000301887.8	protein_coding	64996876,64994448,64987943	64997045,64994549,64989812	Gene ID= ENSG00000168062.9 TPM= 6.42 Transcript Type= protein_coding
chr11	64987945	64990273	64987945	64990273	-	ENST00000435842.2@BATF2	ENST00000435842.2	protein_coding	64990193,64987945	64990273,64989812	Gene ID= ENSG00000168062.9 TPM= 4.09 Transcript Type= protein_coding
chr11	65014113	65022184	65014113	65022184	+	ENST00000246747.8@ARL2	ENST00000246747.8	protein_coding	65014113,65018364,65018571,65020419,65021721	65014272,65018474,65018733,65020499,65022184	Gene ID= ENSG00000213465.7 TPM= 136.99 Transcript Type= protein_coding
chr11	65014192	65022160	65014192	65022160	+	ENST00000533729.1@ARL2	ENST00000533729.1	protein_coding	65014192,65018364,65018571,65021721	65014272,65018474,65018733,65022160	Gene ID= ENSG00000213465.7 TPM= 2.34 Transcript Type= protein_coding
chr11	65014180	65022184	65014180	65022184	+	ENST00000529384.5@ARL2	ENST00000529384.5	protein_coding	65014180,65018364,65018571,65020419,65021721,65021971	65014272,65018474,65018733,65020499,65021888,65022184	Gene ID= ENSG00000213465.7 TPM= 5.06 Transcript Type= protein_coding
chr11	65027425	65040572	65027425	65040572	+	transcript4008.chr11.nic@ARL2-SNX15	transcript4008.chr11.nic	protein_coding	65027425,65032168,65034847,65035059,65035520,65038572,65039686	65027636,65032551,65034962,65035206,65035663,65038829,65040572	Gene ID= ENSG00000273003.1 TPM= 7.39 Transcript Type= NA
chr11	65027408	65040572	65027408	65040572	+	ENST00000377244.7@SNX15	ENST00000377244.7	protein_coding	65027408,65032168,65032431,65034847,65035059,65035520,65038572,65039686	65027636,65032203,65032551,65034962,65035206,65035663,65038829,65040572	Gene ID= ENSG00000110025.12 TPM= 70.44 Transcript Type= protein_coding
chr11	65027425	65040572	65027425	65040572	+	transcript4004.chr11.nic@SNX15	transcript4004.chr11.nic	protein_coding	65027425,65032168,65032431,65034847,65035059,65035520,65038572,65039686	65027636,65032271,65032551,65034962,65035206,65035663,65038829,65040572	Gene ID= ENSG00000110025.12 TPM= 7.39 Transcript Type= NA
chr11	65040904	65044827	65040904	65044827	+	ENST00000398846.5@SAC3D1	ENST00000398846.5	protein_coding	65040904,65044225	65041866,65044827	Gene ID= ENSG00000168061.14 TPM= 12.84 Transcript Type= protein_coding
chr11	65040901	65044799	65040901	65044799	+	ENST00000531072.1@SAC3D1	ENST00000531072.1	protein_coding	65040901,65041286,65044225	65041106,65041866,65044799	Gene ID= ENSG00000168061.14 TPM= 1.17 Transcript Type= protein_coding
chr11	65041245	65044828	65041245	65044828	+	ENST00000529996.1@SAC3D1	ENST00000529996.1	protein_coding	65041245,65043025,65044225	65041866,65043164,65044828	Gene ID= ENSG00000168061.14 TPM= 5.84 Transcript Type= protein_coding
chr11	65077452	65084151	65077452	65084151	-	ENST00000275517.7@CDCA5	ENST00000275517.7	protein_coding	65083933,65083629,65083485,65083364,65079353,65077452	65084151,65083723,65083550,65083399,65079787,65079187	Gene ID= ENSG00000146670.9 TPM= 5.84 Transcript Type= protein_coding
chr11	65084418	65088400	65084418	65088400	+	transcript4025.chr11.nic@ZFPL1	transcript4025.chr11.nic	protein_coding	65084418,65085115,65086415,65086720,65086928,65087316,65087928	65084800,65085226,65086608,65086792,65087074,65087433,65088400	Gene ID= ENSG00000162300.11 TPM= 3.5 Transcript Type= NA
chr11	65084235	65088400	65084235	65088400	+	ENST00000294258.7@ZFPL1	ENST00000294258.7	protein_coding	65084235,65084691,65085115,65086415,65086720,65086928,65087316,65087928	65084378,65084800,65085226,65086608,65086792,65087074,65087433,65088400	Gene ID= ENSG00000162300.11 TPM= 44.37 Transcript Type= protein_coding
chr11	65084223	65085012	65084223	65085012	+	ENST00000525509.1@ZFPL1	ENST00000525509.1	protein_coding	65084223,65084691	65084378,65085012	Gene ID= ENSG00000162300.11 TPM= 4.67 Transcript Type= protein_coding
chr11	65096206	65111707	65096206	65111707	+	transcript4038.chr11.nic@VPS51	transcript4038.chr11.nic	protein_coding	65096206,65096998,65107581,65107803,65109280,65109705,65110482,65110694,65111327	65096478,65097127,65107727,65108914,65109495,65109923,65110603,65110781,65111707	Gene ID= ENSG00000149823.8 TPM= 45.54 Transcript Type= NA
chr11	65102019	65103305	65102019	65103305	-	transcript4046.chr11.nnic@NA	transcript4046.chr11.nnic	NA	65102019	65103305	Gene ID= novel_gene_chr11_4047 TPM= 5.84 Transcript Type= NA
chr11	65111872	65116230	65111872	65116230	+	transcript4034.chr11.nic@TM7SF2	transcript4034.chr11.nic	protein_coding	65111872,65112515,65112811,65113220,65113491,65114713,65114913,65115314,65115476,65115893	65111981,65112711,65112865,65113414,65113594,65114832,65115081,65115394,65115598,65116230	Gene ID= ENSG00000149809.14 TPM= 11.68 Transcript Type= NA
chr11	65116403	65117708	65116403	65117708	-	ENST00000310597.5@ZNHIT2	ENST00000310597.5	protein_coding	65116403	65117708	Gene ID= ENSG00000174276.6 TPM= 25.69 Transcript Type= protein_coding
chr11	65120628	65122473	65120628	65122473	-	ENST00000529639.5@FAU	ENST00000529639.5	protein_coding	65122090,65121739,65121500,65120981,65120628	65122473,65121821,65121644,65121036,65120806	Gene ID= ENSG00000149806.10 TPM= 361.95 Transcript Type= protein_coding
chr11	65127279	65128819	65127279	65128819	-	transcript4058.chr11.nic@SYVN1	transcript4058.chr11.nic	protein_coding	65128563,65127279	65128819,65128488	Gene ID= ENSG00000162298.18 TPM= 17.51 Transcript Type= NA
chr11	65127279	65134533	65127279	65134533	-	ENST00000377190.7@SYVN1	ENST00000377190.7	protein_coding	65134456,65133470,65133160,65132922,65132732,65132248,65131470,65131274,65131132,65130920,65130660,65130251,65130002,65129729,65128563,65127279	65134533,65133618,65133252,65133074,65132780,65132351,65131596,65131373,65131197,65131036,65130823,65130379,65130175,65129915,65128714,65128488	Gene ID= ENSG00000162298.18 TPM= 25.69 Transcript Type= protein_coding
chr11	65122183	65127356	65122183	65127356	+	ENST00000524482.5@MRPL49	ENST00000524482.5	protein_coding	65122183,65124502,65125488,65125726	65122340,65124652,65125612,65127356	Gene ID= ENSG00000149792.8 TPM= 9.92 Transcript Type= processed_transcript
chr11	65122328	65127371	65122328	65127371	+	ENST00000279242.6@MRPL49	ENST00000279242.6	protein_coding	65122328,65124502,65125488,65125726	65122424,65124652,65125612,65127371	Gene ID= ENSG00000149792.8 TPM= 111.51 Transcript Type= protein_coding
chr11	65181194	65212006	65181194	65212006	+	ENST00000533820.5@CAPN1	ENST00000533820.5	protein_coding	65181194,65182701,65183128,65183474,65185917,65186170,65187215,65187955,65188414,65188586,65204683,65205710,65206463,65206780,65208055,65208205,65209323,65209849,65210018,65210336,65210814,65211260	65181410,65182968,65183197,65183592,65186050,65186338,65187298,65188040,65188488,65188746,65204858,65205721,65206674,65206819,65208120,65208262,65209387,65209917,65210096,65210452,65210872,65212006	Gene ID= ENSG00000014216.15 TPM= 38.99 Transcript Type= protein_coding
chr11	65181442	65212006	65181442	65212006	+	transcript4062.chr11.nic@CAPN1	transcript4062.chr11.nic	protein_coding	65181442,65182701,65183128,65183474,65185917,65186170,65187215,65187955,65188414,65188586,65204683,65205710,65206463,65206780,65208055,65208205,65209323,65209849,65210018,65210336,65210814,65211260	65181782,65182968,65183197,65183592,65186050,65186338,65187298,65188040,65188488,65188746,65204858,65205721,65206674,65206819,65208120,65208262,65209387,65209917,65210096,65210452,65210872,65212006	Gene ID= ENSG00000014216.15 TPM= 29.65 Transcript Type= NA
chr11	65181745	65212001	65181745	65212001	+	ENST00000524773.5@CAPN1	ENST00000524773.5	protein_coding	65181745,65182701,65183128,65183474,65185917,65186170,65187215,65187955,65188414,65188586,65204683,65205710,65206463,65206780,65208055,65208205,65209323,65209849,65210018,65210336,65210814,65211260	65181843,65182968,65183197,65183592,65186050,65186338,65187298,65188040,65188488,65188746,65204858,65205721,65206674,65206819,65208120,65208262,65209387,65209917,65210096,65210452,65210872,65212001	Gene ID= ENSG00000014216.15 TPM= 49.03 Transcript Type= protein_coding
chr11	65181872	65212005	65181872	65212005	+	ENST00000279247.10@CAPN1	ENST00000279247.10	protein_coding	65181872,65182701,65183128,65183474,65185917,65186170,65187215,65187955,65188414,65188586,65204683,65205710,65206463,65206780,65208055,65208205,65209323,65209849,65210018,65210336,65210814,65211260	65182013,65182968,65183197,65183592,65186050,65186338,65187298,65188040,65188488,65188746,65204858,65205721,65206674,65206819,65208120,65208262,65209387,65209917,65210096,65210452,65210872,65212005	Gene ID= ENSG00000014216.15 TPM= 425.46 Transcript Type= protein_coding
chr11	65182462	65211987	65182462	65211987	+	ENST00000527323.5@CAPN1	ENST00000527323.5	protein_coding	65182462,65183128,65183474,65185917,65186170,65187215,65187955,65188414,65188586,65204683,65205710,65206463,65206780,65208055,65208205,65209323,65209849,65210018,65210336,65210814,65211260	65182968,65183197,65183592,65186050,65186338,65187298,65188040,65188488,65188746,65204858,65205721,65206674,65206819,65208120,65208262,65209387,65209917,65210096,65210452,65210872,65211987	Gene ID= ENSG00000014216.15 TPM= 4.87 Transcript Type= protein_coding
chr11	65261762	65298685	65261762	65298685	+	ENST00000265465.7@POLA2	ENST00000265465.7	protein_coding	65261762,65266582,65267477,65268672,65275892,65278730,65279538,65280992,65281670,65282479,65287716,65289050,65289799,65294153,65294546,65295540,65295864,65297120	65262371,65266706,65267568,65268729,65275998,65278923,65279626,65281147,65281732,65282521,65287840,65289088,65289872,65294261,65294652,65295599,65295990,65298685	Gene ID= ENSG00000014138.8 TPM= 9.34 Transcript Type= protein_coding
chr11	65314818	65322429	65314818	65322429	+	ENST00000279249.2@CDC42EP2	ENST00000279249.2	protein_coding	65314818,65320544	65314954,65322429	Gene ID= ENSG00000149798.4 TPM= 63.05 Transcript Type= protein_coding
chr11	65333754	65353249	65333754	65353249	+	ENST00000528416.5@DPF2	ENST00000528416.5	protein_coding	65333754,65340385,65340966,65341399,65343745,65343991,65345666,65345930,65346247,65348850,65351683	65333918,65340545,65341073,65341562,65343837,65344069,65345803,65346058,65346359,65348931,65353249	Gene ID= ENSG00000133884.9 TPM= 58.38 Transcript Type= protein_coding
chr11	65333867	65352983	65333867	65352983	+	ENST00000252268.8@DPF2	ENST00000252268.8	protein_coding	65333867,65340385,65340966,65341399,65343745,65343991,65344580,65345666,65345930,65346247,65348850,65351683	65333918,65340545,65341073,65341562,65343837,65344069,65344621,65345803,65346058,65346359,65348931,65352983	Gene ID= ENSG00000133884.9 TPM= 7.01 Transcript Type= protein_coding
chr11	65354767	65357613	65354767	65357613	+	ENST00000309880.5@TIGD3	ENST00000309880.5	protein_coding	65354767,65355793	65354957,65357613	Gene ID= ENSG00000173825.6 TPM= 2.34 Transcript Type= protein_coding
chr11	65373028	65374995	65373028	65374995	+	transcript4122.chr11.nnic@NA	transcript4122.chr11.nnic	NA	65373028	65374995	Gene ID= novel_gene_chr11_4123 TPM= 2.34 Transcript Type= NA
chr11	65375194	65382646	65375194	65382646	-	ENST00000531791.1@SLC25A45	ENST00000531791.1	protein_coding	65380132,65376818,65375194	65382646,65379938,65376675	Gene ID= ENSG00000162241.12 TPM= 14.01 Transcript Type= retained_intron
chr11	65386599	65413525	65386599	65413525	+	ENST00000317568.9@FRMD8	ENST00000317568.9	protein_coding	65386599,65387037,65389361,65393573,65394041,65394259,65396799,65399736,65400724,65404864,65411242	65386761,65387121,65389528,65393674,65394099,65394425,65397020,65399859,65400867,65405068,65413525	Gene ID= ENSG00000126391.13 TPM= 106.25 Transcript Type= protein_coding
chr11	65386637	65413522	65386637	65413522	+	ENST00000355991.9@FRMD8	ENST00000355991.9	protein_coding	65386637,65387037,65393573,65394041,65394259,65396799,65399736,65400724,65404864,65411242	65386761,65387121,65393674,65394099,65394425,65397020,65399859,65400867,65405068,65413522	Gene ID= ENSG00000126391.13 TPM= 11.68 Transcript Type= protein_coding
chr11	65422774	65424827	65422774	65424827	+	ENST00000499732.2@NEAT1	ENST00000499732.2	lincRNA	65422774,65423627	65423383,65424827	Gene ID= ENSG00000245532.7 TPM= 9.34 Transcript Type= lincRNA
chr11	65422797	65426525	65422797	65426525	+	transcript4129.chr11.nnic@NA	transcript4129.chr11.nnic	NA	65422797	65426525	Gene ID= novel_gene_chr11_4130 TPM= 1013.47 Transcript Type= NA
chr11	65427513	65433021	65427513	65433021	+	transcript4137.chr11.nnic@NA	transcript4137.chr11.nnic	NA	65427513	65433021	Gene ID= novel_gene_chr11_4138 TPM= 19.85 Transcript Type= NA
chr11	65438068	65440487	65438068	65440487	+	transcript4131.chr11.nnic@NA	transcript4131.chr11.nnic	NA	65438068	65440487	Gene ID= novel_gene_chr11_4132 TPM= 7.01 Transcript Type= NA
chr11	65497762	65506469	65497762	65506469	+	ENST00000534336.1@MALAT1	ENST00000534336.1	lincRNA	65497762	65506469	Gene ID= ENSG00000251562.7 TPM= 218.34 Transcript Type= lincRNA
chr11	65502620	65505568	65502620	65505568	-	transcript4191.chr11.nnic@NA	transcript4191.chr11.nnic	NA	65504324,65504131,65502620	65505568,65504206,65503799	Gene ID= novel_gene_chr11_4192 TPM= 11.68 Transcript Type= NA
chr11	65525077	65538704	65525077	65538704	+	ENST00000270176.9@SCYL1	ENST00000270176.9	protein_coding	65525077,65525574,65525921,65526124,65526783,65526962,65530629,65531576,65532692,65535227,65535953,65536259,65536586,65536986,65537809,65537967,65538270,65538442	65525264,65525714,65526043,65526350,65526873,65527117,65530787,65531683,65532805,65535382,65536141,65536334,65536750,65537128,65537880,65538182,65538324,65538704	Gene ID= ENSG00000142186.16 TPM= 119.43 Transcript Type= protein_coding
chr11	65525077	65538704	65525077	65538704	+	ENST00000525364.5@SCYL1	ENST00000525364.5	protein_coding	65525077,65525574,65525921,65526124,65526783,65526962,65530629,65531576,65532692,65535227,65535953,65536259,65536586,65536986,65537812,65537967,65538442	65525264,65525714,65526043,65526350,65526873,65527117,65530787,65531683,65532805,65535382,65536141,65536334,65536750,65537128,65537880,65538182,65538704	Gene ID= ENSG00000142186.16 TPM= 5.94 Transcript Type= protein_coding
chr11	65525075	65538704	65525075	65538704	+	transcript4173.chr11.nic@SCYL1	transcript4173.chr11.nic	protein_coding	65525075,65525574,65525921,65526124,65526783,65526962,65530629,65531576,65532692,65535227,65535953,65536259,65536586,65536986,65537809,65537967	65525264,65525714,65526043,65526350,65526873,65527117,65530787,65531683,65532805,65535382,65536141,65536334,65536750,65537128,65537880,65538704	Gene ID= ENSG00000142186.16 TPM= 5.94 Transcript Type= NA
chr11	65537849	65538704	65537849	65538704	+	ENST00000532290.1@SCYL1	ENST00000532290.1	protein_coding	65537849	65538704	Gene ID= ENSG00000142186.16 TPM= 4.67 Transcript Type= retained_intron
chr11	65525085	65538704	65525085	65538704	+	ENST00000420247.6@SCYL1	ENST00000420247.6	protein_coding	65525085,65525574,65525921,65526124,65526783,65526962,65530629,65531576,65532692,65535227,65535953,65536259,65536586,65537037,65537809,65537967,65538270,65538442	65525264,65525714,65526043,65526350,65526873,65527117,65530787,65531683,65532805,65535382,65536141,65536334,65536750,65537128,65537880,65538182,65538324,65538704	Gene ID= ENSG00000142186.16 TPM= 52.88 Transcript Type= protein_coding
chr11	65525121	65538704	65525121	65538704	+	ENST00000524944.5@SCYL1	ENST00000524944.5	protein_coding	65525121,65525574,65525921,65526124,65526783,65526962,65530629,65531576,65532692,65535227,65535953,65536259,65536586,65536986,65537809,65537967,65538270	65525264,65525714,65526043,65526350,65526873,65527117,65530787,65531683,65532805,65535382,65536141,65536334,65536750,65537128,65537880,65538182,65538704	Gene ID= ENSG00000142186.16 TPM= 1.3 Transcript Type= protein_coding
chr11	65525112	65538704	65525112	65538704	+	ENST00000533862.5@SCYL1	ENST00000533862.5	protein_coding	65525112,65525574,65525921,65526124,65526783,65526962,65530629,65531576,65532692,65535227,65535953,65536259,65536586,65536986,65537809,65538004,65538270,65538442	65525264,65525714,65526043,65526350,65526873,65527117,65530787,65531683,65532805,65535382,65536141,65536334,65536750,65537128,65537880,65538182,65538324,65538704	Gene ID= ENSG00000142186.16 TPM= 5.18 Transcript Type= protein_coding
chr11	65538818	65558228	65538818	65558228	-	ENST00000301873.9@LTBP3	ENST00000301873.9	protein_coding	65557629,65554051,65553701,65553425,65553164,65552860,65552248,65551972,65551548,65551402,65551126,65547920,65547690,65547439,65546798,65546442,65543427,65543105,65541600,65541126,65540871,65540486,65540245,65540013,65539720,65539548,65539328,65538818	65558228,65554380,65553903,65553530,65553256,65552982,65552406,65552157,65551564,65551474,65551224,65548045,65547821,65547567,65546920,65546564,65543549,65543224,65541728,65541293,65540954,65540614,65540382,65540153,65539881,65539628,65539459,65539231	Gene ID= ENSG00000168056.15 TPM= 201.41 Transcript Type= protein_coding
chr11	65552761	65559936	65552761	65559936	+	transcript4196.chr11.nnic@NA	transcript4196.chr11.nnic	NA	65552761,65557245	65552987,65559936	Gene ID= novel_gene_chr11_4197 TPM= 4.67 Transcript Type= NA
chr11	65552761	65559936	65552761	65559936	+	transcript4255.chr11.nnic@NA	transcript4255.chr11.nnic	NA	65552761,65557245	65552987,65559936	Gene ID= novel_gene_chr11_4256 TPM= 2.34 Transcript Type= NA
chr11	65569821	65574190	65569821	65574190	+	transcript4257.chr11.nic@SSSCA1	transcript4257.chr11.nic	protein_coding	65569821,65570604,65570886,65571391,65573353	65570510,65570755,65570970,65572960,65574190	Gene ID= ENSG00000173465.7 TPM= 48.46 Transcript Type= NA
chr11	65570460	65571888	65570460	65571888	+	ENST00000531405.5@SSSCA1	ENST00000531405.5	protein_coding	65570460,65570886,65571391	65570755,65570970,65571888	Gene ID= ENSG00000173465.7 TPM= 1.17 Transcript Type= protein_coding
chr11	65570430	65571770	65570430	65571770	+	ENST00000309328.7@SSSCA1	ENST00000309328.7	protein_coding	65570430,65570604,65570886,65571391	65570510,65570755,65570970,65571770	Gene ID= ENSG00000173465.7 TPM= 24.52 Transcript Type= protein_coding
chr11	65572552	65574192	65572552	65574192	+	transcript4267.chr11.nnic@FAM89B	transcript4267.chr11.nnic	protein_coding	65572552,65572604,65573363	65572558,65572960,65574192	Gene ID= ENSG00000176973.7 TPM= 13.43 Transcript Type= NA
chr11	65572528	65574192	65572528	65574192	+	ENST00000530349.1@FAM89B	ENST00000530349.1	protein_coding	65572528,65573363	65572960,65574192	Gene ID= ENSG00000176973.7 TPM= 118.51 Transcript Type= protein_coding
chr11	65576049	65592650	65576049	65592650	+	transcript4281.chr11.nnic@EHBP1L1	transcript4281.chr11.nnic	protein_coding	65576049,65579078,65579341,65579936,65580081,65580337,65581058,65581211,65581539,65584241,65584486,65584959,65589751,65589936,65590087,65590493,65591800,65591976,65592203	65576406,65579135,65579436,65579989,65580259,65580479,65581126,65581373,65581704,65584398,65584534,65585591,65589820,65589991,65590210,65590592,65591873,65592090,65592650	Gene ID= ENSG00000173442.12 TPM= 3.5 Transcript Type= NA
chr11	65575759	65592650	65575759	65592650	+	transcript4282.chr11.nnic@EHBP1L1	transcript4282.chr11.nnic	protein_coding	65575759,65579078,65579341,65579936,65580081,65580337,65581058,65581211,65581539,65584241,65584486,65584959,65589751,65589936,65590087,65590493,65591800,65591976,65592203	65576406,65579135,65579436,65579989,65580259,65580479,65581126,65581373,65581965,65584398,65584534,65585591,65589820,65589991,65590210,65590592,65591873,65592090,65592650	Gene ID= ENSG00000173442.12 TPM= 35.03 Transcript Type= NA
chr11	65576036	65592650	65576036	65592650	+	transcript4291.chr11.nnic@EHBP1L1	transcript4291.chr11.nnic	protein_coding	65576036,65579078,65579341,65579936,65580081,65580337,65581058,65581211,65584241,65584486,65584959,65589751,65589936,65590087,65590493,65591800,65591976,65592203	65576406,65579135,65579436,65579989,65580259,65580479,65581126,65581326,65584398,65584534,65585591,65589820,65589991,65590210,65590592,65591873,65592090,65592650	Gene ID= ENSG00000173442.12 TPM= 11.68 Transcript Type= NA
chr11	65576038	65592650	65576038	65592650	+	ENST00000309295.8@EHBP1L1	ENST00000309295.8	protein_coding	65576038,65579078,65579341,65579936,65580081,65580337,65581058,65581211,65581539,65584241,65584486,65584959,65589751,65589936,65590087,65590493,65591800,65591976,65592203	65576406,65579135,65579436,65579989,65580259,65580479,65581126,65581373,65583765,65584398,65584534,65585591,65589820,65589991,65590210,65590592,65591873,65592090,65592650	Gene ID= ENSG00000173442.12 TPM= 47.87 Transcript Type= protein_coding
chr11	65597756	65614221	65597756	65614221	-	transcript4298.chr11.nic@MAP3K11	transcript4298.chr11.nic	protein_coding	65613018,65608268,65607922,65607641,65607270,65606691,65605946,65605761,65605593,65599394,65597756	65614221,65608448,65608070,65607816,65607513,65606804,65606081,65605852,65605642,65599768,65598628	Gene ID= ENSG00000173327.7 TPM= 43.2 Transcript Type= NA
chr11	65608632	65614236	65608632	65614236	-	ENST00000527304.1@MAP3K11	ENST00000527304.1	protein_coding	65608632	65614236	Gene ID= ENSG00000173327.7 TPM= 10.51 Transcript Type= retained_intron
chr11	65597755	65614242	65597755	65614242	-	ENST00000309100.7@MAP3K11	ENST00000309100.7	protein_coding	65613018,65608268,65607922,65607641,65607270,65606691,65605946,65605761,65599394,65597755	65614242,65608448,65608070,65607816,65607513,65606804,65606081,65605852,65599768,65598628	Gene ID= ENSG00000173327.7 TPM= 191.49 Transcript Type= protein_coding
chr11	65615773	65637439	65615773	65637439	+	ENST00000355703.3@PCNX3	ENST00000355703.3	protein_coding	65615773,65616824,65617250,65617470,65617611,65617940,65619537,65619754,65620339,65620831,65622245,65623491,65623929,65624195,65624471,65624925,65625171,65625405,65625652,65625904,65626904,65627405,65628595,65628819,65629357,65629520,65630351,65634126,65634538,65634973,65635218,65635529,65636174,65636391,65636766	65616464,65617011,65617349,65617509,65617706,65619067,65619660,65619932,65620429,65620966,65622366,65623644,65623961,65624366,65624581,65625016,65625280,65625510,65625744,65626054,65627048,65627582,65628703,65628948,65629415,65629735,65630604,65634356,65634641,65635120,65635448,65635803,65636307,65636689,65637439	Gene ID= ENSG00000197136.4 TPM= 53.71 Transcript Type= protein_coding
chr11	65639090	65650918	65639090	65650918	+	transcript4329.chr11.nic@SIPA1	transcript4329.chr11.nic	protein_coding	65639090,65642250,65642463,65644955,65645854,65646221,65646456,65647384,65649262,65649561,65649757,65649950,65650138,65650401,65650569	65641600,65642377,65642639,65645129,65645957,65646378,65647065,65647658,65649480,65649672,65649865,65650051,65650192,65650479,65650918	Gene ID= ENSG00000213445.9 TPM= 97.79 Transcript Type= NA
chr11	65638097	65650930	65638097	65650930	+	ENST00000534313.5@SIPA1	ENST00000534313.5	protein_coding	65638097,65640831,65642250,65642463,65644955,65645854,65646221,65646456,65647384,65649262,65649561,65649757,65649950,65650138,65650401,65650569	65638182,65641600,65642377,65642639,65645129,65645957,65646378,65647065,65647658,65649480,65649672,65649865,65650051,65650192,65650479,65650930	Gene ID= ENSG00000213445.9 TPM= 197.71 Transcript Type= protein_coding
chr11	65653596	65663094	65653596	65663094	-	ENST00000406246.7@RELA	ENST00000406246.7	protein_coding	65662826,65662179,65661937,65661687,65660124,65659666,65658718,65658287,65655855,65655688,65653596	65663094,65662205,65662088,65661835,65660215,65659797,65658822,65658499,65655935,65655762,65655000	Gene ID= ENSG00000173039.18 TPM= 126.1 Transcript Type= protein_coding
chr11	65711996	65719604	65711996	65719604	+	ENST00000377046.7@KAT5	ENST00000377046.7	protein_coding	65711996,65712379,65712766,65712922,65713348,65713593,65713774,65714495,65714821,65716667,65716889,65718590,65718873,65719047	65712279,65712445,65712834,65713058,65713503,65713667,65713848,65714743,65714910,65716807,65716982,65718749,65718954,65719604	Gene ID= ENSG00000172977.12 TPM= 50.71 Transcript Type= protein_coding
chr11	65712018	65719604	65712018	65719604	+	ENST00000352980.8@KAT5	ENST00000352980.8	protein_coding	65712018,65712379,65712766,65712922,65713593,65713774,65714495,65714821,65716667,65716889,65718590,65718873,65719047	65712279,65712445,65712834,65713058,65713667,65713848,65714743,65714910,65716807,65716982,65718749,65718954,65719604	Gene ID= ENSG00000172977.12 TPM= 60.05 Transcript Type= protein_coding
chr11	65712034	65719602	65712034	65719602	+	ENST00000341318.8@KAT5	ENST00000341318.8	protein_coding	65712034,65712766,65712922,65713348,65713593,65713774,65714495,65714821,65716667,65716889,65718590,65718873,65719047	65712445,65712834,65713058,65713503,65713667,65713848,65714743,65714910,65716807,65716982,65718749,65718954,65719602	Gene ID= ENSG00000172977.12 TPM= 21.13 Transcript Type= protein_coding
chr11	65717673	65720947	65717673	65720947	-	ENST00000308418.8@RNASEH2C	ENST00000308418.8	protein_coding	65720587,65720242,65720045,65717673	65720947,65720417,65720164,65719809	Gene ID= ENSG00000172922.8 TPM= 15.18 Transcript Type= protein_coding
chr11	65719170	65720818	65719170	65720818	-	ENST00000528220.1@RNASEH2C	ENST00000528220.1	protein_coding	65720242,65720045,65719170	65720818,65720164,65719809	Gene ID= ENSG00000172922.8 TPM= 1.17 Transcript Type= protein_coding
chr11	65775893	65780802	65775893	65780802	-	ENST00000532090.2@AP5B1	ENST00000532090.2	protein_coding	65780442,65775893	65780802,65780342	Gene ID= ENSG00000254470.2 TPM= 19.85 Transcript Type= protein_coding
chr11	65787022	65797219	65787022	65797219	+	ENST00000335987.7@OVOL1	ENST00000335987.7	protein_coding	65787022,65794031,65794538,65795046	65787473,65794248,65794727,65797219	Gene ID= ENSG00000172818.9 TPM= 7.01 Transcript Type= protein_coding
chr11	65854675	65859415	65854675	65859415	-	ENST00000525451.6@CFL1	ENST00000525451.6	protein_coding	65859231,65858097,65855935,65855654,65854675	65859415,65858630,65856242,65855730,65855448	Gene ID= ENSG00000172757.12 TPM= 790.46 Transcript Type= protein_coding
chr11	65854837	65858333	65854837	65858333	-	ENST00000308162.9@CFL1	ENST00000308162.9	protein_coding	65858097,65855935,65855654,65854837	65858333,65856242,65855730,65855448	Gene ID= ENSG00000172757.12 TPM= 823.15 Transcript Type= protein_coding
chr11	65854832	65858194	65854832	65858194	-	ENST00000530945.1@CFL1	ENST00000530945.1	protein_coding	65858097,65854832	65858194,65856242	Gene ID= ENSG00000172757.12 TPM= 2.34 Transcript Type= retained_intron
chr11	65860405	65866439	65860405	65866439	+	ENST00000308110.8@MUS81	ENST00000308110.8	protein_coding	65860405,65860973,65861350,65861947,65862211,65862444,65863065,65863410,65863600,65863804,65864497,65864720,65865017,65865220,65865811,65865986	65860888,65861102,65861435,65862045,65862279,65862529,65863205,65863502,65863721,65863901,65864613,65864815,65865145,65865323,65865894,65866439	Gene ID= ENSG00000172732.11 TPM= 49.27 Transcript Type= protein_coding
chr11	65860403	65866439	65860403	65866439	+	transcript4406.chr11.nic@MUS81	transcript4406.chr11.nic	protein_coding	65860403,65860973,65861350,65861947,65862211,65862444,65863065,65863410,65863600,65863804,65864497,65864720,65865220,65865811,65865986	65860888,65861102,65861435,65862045,65862279,65862529,65863205,65863502,65863721,65863901,65864613,65865145,65865323,65865894,65866439	Gene ID= ENSG00000172732.11 TPM= 7.24 Transcript Type= NA
chr11	65860403	65866439	65860403	65866439	+	transcript4407.chr11.nic@MUS81	transcript4407.chr11.nic	protein_coding	65860403,65860973,65861350,65861947,65862211,65862444,65863065,65863410,65863600,65864497,65864720,65865017,65865220,65865811,65865986	65860888,65861102,65861435,65862045,65862279,65862529,65863205,65863502,65863901,65864613,65864815,65865145,65865323,65865894,65866439	Gene ID= ENSG00000172732.11 TPM= 6.07 Transcript Type= NA
chr11	65860403	65866439	65860403	65866439	+	transcript4408.chr11.nic@MUS81	transcript4408.chr11.nic	protein_coding	65860403,65860973,65861350,65861947,65862211,65862444,65863065,65863410,65863600,65864497,65864720,65865115,65865220,65865811,65865986	65860888,65861102,65861435,65862045,65862279,65862529,65863205,65863502,65863901,65864613,65864815,65865145,65865323,65865894,65866439	Gene ID= ENSG00000172732.11 TPM= 4.9 Transcript Type= NA
chr11	65860490	65866439	65860490	65866439	+	transcript4411.chr11.nic@MUS81	transcript4411.chr11.nic	protein_coding	65860490,65861350,65861947,65862211,65862444,65863065,65863410,65863600,65863804,65864497,65864720,65865017,65865220,65865811,65865986	65861102,65861435,65862045,65862279,65862529,65863205,65863502,65863721,65863901,65864613,65864815,65865145,65865323,65865894,65866439	Gene ID= ENSG00000172732.11 TPM= 7.24 Transcript Type= NA
chr11	65860403	65866366	65860403	65866366	+	transcript4414.chr11.nic@MUS81	transcript4414.chr11.nic	protein_coding	65860403,65860973,65861350,65861947,65862211,65862444,65863065,65863410,65863600,65864497,65864720,65865220,65865811,65865986	65860888,65861102,65861435,65862045,65862279,65862529,65863205,65863502,65863901,65864613,65865145,65865323,65865894,65866366	Gene ID= ENSG00000172732.11 TPM= 2.34 Transcript Type= NA
chr11	65866447	65872906	65866447	65872906	-	ENST00000307998.10@EFEMP2	ENST00000307998.10	protein_coding	65872683,65872244,65871970,65871157,65870536,65870121,65869857,65868510,65868295,65867861,65866447	65872906,65872361,65872018,65871363,65870658,65870237,65869976,65868629,65868421,65868056,65867079	Gene ID= ENSG00000172638.12 TPM= 102.98 Transcript Type= protein_coding
chr11	65866441	65872811	65866441	65872811	-	ENST00000531972.5@EFEMP2	ENST00000531972.5	protein_coding	65872683,65872244,65871970,65871157,65870536,65870121,65869857,65868510,65868295,65867861,65866845,65866441	65872811,65872361,65872018,65871363,65870658,65870237,65869976,65868629,65868421,65868056,65867079,65866712	Gene ID= ENSG00000172638.12 TPM= 21.25 Transcript Type= nonsense_mediated_decay
chr11	65879809	65883741	65879809	65883741	+	ENST00000307886.7@CTSW	ENST00000307886.7	protein_coding	65879809,65880202,65881407,65882175,65882430,65882609,65882779,65883069,65883215,65883508	65879941,65880286,65881520,65882329,65882526,65882689,65882904,65883133,65883424,65883741	Gene ID= ENSG00000172543.7 TPM= 19.85 Transcript Type= protein_coding
chr11	65879851	65883741	65879851	65883741	+	ENST00000528419.5@CTSW	ENST00000528419.5	protein_coding	65879851,65880202,65881407,65882175,65882430,65882609,65882779,65883069,65883215	65879941,65880286,65881520,65882329,65882526,65882689,65882904,65883133,65883741	Gene ID= ENSG00000172543.7 TPM= 1.17 Transcript Type= protein_coding
chr11	65883921	65888539	65883921	65888539	-	ENST00000357519.8@FIBP	ENST00000357519.8	protein_coding	65888334,65887934,65887600,65886322,65885530,65885078,65884935,65884570,65884392,65883921	65888539,65888132,65887726,65886422,65885663,65885186,65884998,65884656,65884489,65884043	Gene ID= ENSG00000172500.12 TPM= 46.12 Transcript Type= protein_coding
chr11	65883921	65888531	65883921	65888531	-	ENST00000338369.6@FIBP	ENST00000338369.6	protein_coding	65888334,65887934,65887600,65886322,65885509,65885078,65884935,65884570,65884392,65883921	65888531,65888132,65887726,65886422,65885663,65885186,65884998,65884656,65884489,65884043	Gene ID= ENSG00000172500.12 TPM= 8.76 Transcript Type= protein_coding
chr11	65888640	65890134	65888640	65890134	+	transcript4470.chr11.nnic@NA	transcript4470.chr11.nnic	NA	65888640	65890134	Gene ID= novel_gene_chr11_4471 TPM= 2.34 Transcript Type= NA
chr11	65892220	65900526	65892220	65900526	-	ENST00000312562.6@FOSL1	ENST00000312562.6	protein_coding	65900241,65896809,65894014,65892220	65900526,65897006,65894121,65893296	Gene ID= ENSG00000175592.8 TPM= 7.01 Transcript Type= protein_coding
chr11	65916810	65919062	65916810	65919062	-	ENST00000449692.3@C11orf68	ENST00000449692.3	protein_coding	65918910,65916810	65919062,65918215	Gene ID= ENSG00000175573.6 TPM= 63.05 Transcript Type= protein_coding
chr11	65919416	65921544	65919416	65921544	+	transcript4474.chr11.nic@DRAP1	transcript4474.chr11.nic	protein_coding	65919416,65919780,65920343,65920569,65920884,65921330	65919543,65920041,65920462,65920662,65920972,65921544	Gene ID= ENSG00000175550.7 TPM= 13.43 Transcript Type= NA
chr11	65919257	65921561	65919257	65921561	+	ENST00000312515.6@DRAP1	ENST00000312515.6	protein_coding	65919257,65919780,65919948,65920343,65920569,65920884,65921330	65919543,65919852,65920041,65920462,65920662,65920972,65921561	Gene ID= ENSG00000175550.7 TPM= 89.32 Transcript Type= protein_coding
chr11	65961689	65979828	65961689	65979828	+	ENST00000312397.9@SART1	ENST00000312397.9	protein_coding	65961689,65964074,65964515,65965092,65965342,65965702,65965887,65966076,65966350,65967259,65967471,65967679,65976395,65976656,65977014,65977563,65977764,65978600,65978793,65979012	65962093,65964131,65964570,65965218,65965447,65965779,65965986,65966218,65966556,65967383,65967586,65967821,65976568,65976766,65977101,65977653,65977899,65978689,65978914,65979828	Gene ID= ENSG00000175467.14 TPM= 119.09 Transcript Type= protein_coding
chr11	65996545	66002156	65996545	66002156	-	ENST00000526451.5@EIF1AD	ENST00000526451.5	protein_coding	66002040,66000303,66000053,65999567,65999350,65996545	66002156,66000481,66000161,65999675,65999397,65998743	Gene ID= ENSG00000175376.8 TPM= 9.34 Transcript Type= protein_coding
chr11	65998433	66002166	65998433	66002166	-	ENST00000529964.5@EIF1AD	ENST00000529964.5	protein_coding	66002040,66000303,66000053,65999567,65999350,65998433	66002166,66000406,66000161,65999675,65999397,65998743	Gene ID= ENSG00000175376.8 TPM= 2.34 Transcript Type= protein_coding
chr11	65997509	66001492	65997509	66001492	-	transcript4495.chr11.nic@EIF1AD	transcript4495.chr11.nic	protein_coding	66000303,66000053,65999567,65999350,65997509	66001492,66000161,65999675,65999397,65998743	Gene ID= ENSG00000175376.8 TPM= 7.01 Transcript Type= NA
chr11	66002228	66004146	66002228	66004146	+	ENST00000445560.6@BANF1	ENST00000445560.6	protein_coding	66002228,66003235,66003626	66002513,66003373,66004146	Gene ID= ENSG00000175334.7 TPM= 11.09 Transcript Type= protein_coding
chr11	66002079	66004149	66002079	66004149	+	ENST00000312175.6@BANF1	ENST00000312175.6	protein_coding	66002079,66003235,66003626	66002570,66003373,66004149	Gene ID= ENSG00000175334.7 TPM= 61.3 Transcript Type= protein_coding
chr11	66002480	66004146	66002480	66004146	+	ENST00000524628.1@BANF1	ENST00000524628.1	protein_coding	66002480,66003626	66002570,66004146	Gene ID= ENSG00000175334.7 TPM= 2.34 Transcript Type= processed_transcript
chr11	66002253	66004145	66002253	66004145	+	transcript4502.chr11.nnic@NA	transcript4502.chr11.nnic	NA	66002253	66004145	Gene ID= novel_gene_chr11_4503 TPM= 5.84 Transcript Type= NA
chr11	66011841	66013505	66011841	66013505	+	ENST00000312134.2@CST6	ENST00000312134.2	protein_coding	66011841,66012826,66013317	66012284,66012951,66013505	Gene ID= ENSG00000175315.2 TPM= 21.02 Transcript Type= protein_coding
chr11	66052336	66068911	66052336	66068911	+	ENST00000322535.10@SF3B2	ENST00000322535.10	protein_coding	66052336,66052673,66053027,66055076,66055535,66056838,66057266,66058054,66058314,66058830,66059201,66059515,66059782,66060582,66061686,66061891,66063009,66063400,66063628,66067946,66068148,66068674	66052517,66052719,66053104,66055315,66055585,66056955,66057375,66058150,66058405,66059045,66059338,66059595,66060009,66060731,66061775,66061998,66063116,66063542,66063729,66068045,66068333,66068911	Gene ID= ENSG00000087365.15 TPM= 301.24 Transcript Type= protein_coding
chr11	66070316	66221643	66070316	66221643	+	transcript4534.chr11.nic@PACS1	transcript4534.chr11.nic	protein_coding	66070316,66193486,66210362,66211134,66216119,66216520,66216695,66219746,66221154	66070842,66193573,66210451,66211259,66216263,66216611,66216775,66220791,66221643	Gene ID= ENSG00000175115.11 TPM= 3.5 Transcript Type= NA
chr11	66070454	66244747	66070454	66244747	+	ENST00000320580.8@PACS1	ENST00000320580.8	protein_coding	66070454,66193486,66210362,66211134,66216119,66216520,66216695,66219746,66220631,66221154,66227504,66230548,66230805,66232172,66232960,66233785,66234132,66235301,66235898,66238804,66239142,66241427,66242912,66243165	66070842,66193573,66210451,66211259,66216263,66216611,66216775,66219805,66220791,66221247,66227584,66230663,66230940,66232276,66233066,66233939,66234242,66235403,66235940,66238846,66239277,66241653,66243031,66244747	Gene ID= ENSG00000175115.11 TPM= 31.53 Transcript Type= protein_coding
chr11	66244840	66257610	66244840	66257610	-	transcript4537.chr11.nnic@AP000759.1	transcript4537.chr11.nnic	antisense_RNA	66257493,66246176,66244840	66257610,66246373,66245112	Gene ID= ENSG00000255320.1 TPM= 2.34 Transcript Type= NA
chr11	66245489	66247797	66245489	66247797	+	transcript4539.chr11.nnic@NA	transcript4539.chr11.nnic	NA	66245489	66247797	Gene ID= novel_gene_chr11_4540 TPM= 2.34 Transcript Type= NA
chr11	66257642	66267860	66257642	66267860	+	transcript4521.chr11.nic@KLC2	transcript4521.chr11.nic	protein_coding	66257642,66258547,66261742,66262123,66262814,66263660,66263851,66264046,66264345,66265023,66265168,66265655,66265854,66266093,66266433,66266873	66257730,66258822,66261972,66262192,66263036,66263747,66263952,66264219,66264444,66265072,66265235,66265763,66266012,66266217,66266490,66267860	Gene ID= ENSG00000174996.11 TPM= 10.12 Transcript Type= NA
chr11	66257768	66267860	66257768	66267860	+	transcript4528.chr11.nnic@KLC2	transcript4528.chr11.nnic	protein_coding	66257768,66258584,66261742,66262123,66262814,66263660,66263851,66264046,66264345,66265023,66265168,66265655,66265854,66266093,66266433,66267174	66257871,66258822,66261972,66262192,66263036,66263747,66263952,66264219,66264444,66265072,66265235,66265763,66266012,66266217,66266490,66267860	Gene ID= ENSG00000174996.11 TPM= 8.96 Transcript Type= NA
chr11	66257703	66267860	66257703	66267860	+	ENST00000316924.9@KLC2	ENST00000316924.9	protein_coding	66257703,66258547,66261742,66262123,66262814,66263660,66263851,66264046,66264345,66265023,66265168,66265655,66265854,66266093,66266433,66266873	66257871,66258822,66261972,66262192,66263036,66263747,66263952,66264219,66264444,66265072,66265235,66265763,66266012,66266217,66266490,66267860	Gene ID= ENSG00000174996.11 TPM= 22.97 Transcript Type= protein_coding
chr11	66268533	66277492	66268533	66277492	+	ENST00000311481.10@RAB1B	ENST00000311481.10	protein_coding	66268533,66271797,66272157,66272365,66275804,66276044	66268693,66271869,66272252,66272460,66275935,66277492	Gene ID= ENSG00000174903.15 TPM= 147.12 Transcript Type= protein_coding
chr11	66284580	66289184	66284580	66289184	-	transcript4543.chr11.nic@YIF1A	transcript4543.chr11.nic	protein_coding	66288955,66288081,66287812,66287598,66285701,66285381,66284873,66284580	66289184,66288292,66287916,66287676,66285758,66285572,66284966,66284783	Gene ID= ENSG00000174851.15 TPM= 5.49 Transcript Type= NA
chr11	66284580	66289184	66284580	66289184	-	transcript4551.chr11.nic@YIF1A	transcript4551.chr11.nic	protein_coding	66288955,66288081,66287812,66285381,66284873,66284580	66289184,66288292,66287916,66287676,66284966,66284783	Gene ID= ENSG00000174851.15 TPM= 6.36 Transcript Type= NA
chr11	66284580	66289170	66284580	66289170	-	ENST00000376901.8@YIF1A	ENST00000376901.8	protein_coding	66288955,66288081,66287812,66287598,66285701,66285381,66284873,66284580	66289170,66288292,66287916,66287676,66285758,66285536,66284966,66284783	Gene ID= ENSG00000174851.15 TPM= 181.79 Transcript Type= protein_coding
chr11	66284580	66289145	66284580	66289145	-	ENST00000359461.10@YIF1A	ENST00000359461.10	protein_coding	66288955,66288081,66287812,66287598,66285701,66284873,66284580	66289145,66288292,66287916,66287676,66285758,66284966,66284783	Gene ID= ENSG00000174851.15 TPM= 4.32 Transcript Type= protein_coding
chr11	66314487	66317044	66314487	66317044	-	ENST00000311330.3@CD248	ENST00000311330.3	protein_coding	66314487	66317044	Gene ID= ENSG00000174807.3 TPM= 24.52 Transcript Type= protein_coding
chr11	66332062	66336529	66332062	66336529	-	ENST00000311320.8@RIN1	ENST00000311320.8	protein_coding	66336317,66335978,66335762,66335610,66335407,66334514,66333919,66333527,66333258,66332062	66336529,66336158,66335876,66335682,66335498,66335251,66334224,66333658,66333409,66332752	Gene ID= ENSG00000174791.10 TPM= 8.76 Transcript Type= protein_coding
chr11	66332062	66336447	66332062	66336447	-	transcript4559.chr11.nic@RIN1	transcript4559.chr11.nic	protein_coding	66336317,66335978,66335762,66335610,66334514,66333919,66333527,66333258,66332062	66336447,66336158,66335876,66335682,66335498,66334224,66333658,66333409,66332752	Gene ID= ENSG00000174791.10 TPM= 4.09 Transcript Type= NA
chr11	66337339	66345125	66337339	66345125	-	ENST00000359957.7@BRMS1	ENST00000359957.7	protein_coding	66344972,66342096,66341533,66341206,66340967,66340774,66340121,66338721,66338243,66337339	66345125,66342241,66341623,66341333,66341046,66340870,66340213,66338785,66338282,66337889	Gene ID= ENSG00000174744.13 TPM= 55.46 Transcript Type= protein_coding
chr11	66337342	66345127	66337342	66345127	-	transcript4569.chr11.nic@BRMS1	transcript4569.chr11.nic	protein_coding	66344972,66342096,66341533,66341206,66340967,66340774,66340121,66337342	66345127,66342241,66341623,66341333,66341046,66340870,66340213,66338785	Gene ID= ENSG00000174744.13 TPM= 2.34 Transcript Type= NA
chr11	66337333	66345119	66337333	66345119	-	ENST00000425825.6@BRMS1	ENST00000425825.6	protein_coding	66344972,66342096,66341533,66341206,66340967,66340774,66340121,66338721,66338243,66337333	66345119,66342241,66341623,66341333,66341046,66340870,66340213,66338785,66338282,66337807	Gene ID= ENSG00000174744.13 TPM= 2.92 Transcript Type= protein_coding
chr11	66337369	66345089	66337369	66345089	-	ENST00000530238.5@BRMS1	ENST00000530238.5	protein_coding	66344972,66342096,66341533,66341206,66340967,66340774,66340121,66338243,66337369	66345089,66342241,66341623,66341333,66341046,66340870,66340213,66338785,66337889	Gene ID= ENSG00000174744.13 TPM= 1.17 Transcript Type= retained_intron
chr11	66345372	66347692	66345372	66347692	-	ENST00000311181.4@B4GAT1	ENST00000311181.4	protein_coding	66346490,66345372	66347692,66346240	Gene ID= ENSG00000174684.6 TPM= 85.23 Transcript Type= protein_coding
chr11	66359463	66359771	66359463	66359771	-	transcript4590.chr11.nnic@NA	transcript4590.chr11.nnic	NA	66359463	66359771	Gene ID= novel_gene_chr11_4591 TPM= 2.34 Transcript Type= NA
chr11	66360913	66367607	66360913	66367607	-	transcript4588.chr11.nnic@NA	transcript4588.chr11.nnic	NA	66360913	66367607	Gene ID= novel_gene_chr11_4589 TPM= 9.34 Transcript Type= NA
chr11	66362522	66371820	66362522	66371820	-	ENST00000540386.5@SLC29A2	ENST00000540386.5	protein_coding	66371563,66371244,66369369,66369060,66368537,66367772,66367464,66366431,66366126,66365936,66364225,66362522	66371820,66371325,66369532,66369199,66368671,66367869,66367548,66366564,66366191,66366021,66364424,66363547	Gene ID= ENSG00000174669.11 TPM= 8.17 Transcript Type= nonsense_mediated_decay
chr11	66364996	66366808	66364996	66366808	+	transcript4584.chr11.nnic@NA	transcript4584.chr11.nnic	NA	66364996	66366808	Gene ID= novel_gene_chr11_4585 TPM= 7.01 Transcript Type= NA
chr11	66365817	66368048	66365817	66368048	+	transcript4586.chr11.nnic@NA	transcript4586.chr11.nnic	NA	66365817	66368048	Gene ID= novel_gene_chr11_4587 TPM= 2.34 Transcript Type= NA
chr11	66435075	66438848	66435075	66438848	-	ENST00000430466.6@MRPL11	ENST00000430466.6	protein_coding	66438710,66438164,66437350,66437104,66435075	66438848,66438259,66437443,66437263,66436112	Gene ID= ENSG00000174547.13 TPM= 3.5 Transcript Type= protein_coding
chr11	66435075	66438848	66435075	66438848	-	ENST00000310999.11@MRPL11	ENST00000310999.11	protein_coding	66438632,66438164,66437350,66437104,66435075	66438848,66438259,66437443,66437263,66436112	Gene ID= ENSG00000174547.13 TPM= 3.5 Transcript Type= protein_coding
chr11	66435838	66438826	66435838	66438826	-	ENST00000534488.5@MRPL11	ENST00000534488.5	protein_coding	66438632,66438164,66437350,66437104,66435838	66438826,66438259,66437435,66437263,66436112	Gene ID= ENSG00000174547.13 TPM= 36.2 Transcript Type= nonsense_mediated_decay
chr11	66466869	66477337	66466869	66477337	+	ENST00000320740.11@PELI3	ENST00000320740.11	protein_coding	66466869,66468128,66468833,66471242,66472369,66473241,66473737,66475598	66467027,66468280,66468904,66471371,66472470,66473435,66473925,66477337	Gene ID= ENSG00000174516.14 TPM= 25.1 Transcript Type= protein_coding
chr11	66466896	66477334	66466896	66477334	+	transcript4604.chr11.nic@PELI3	transcript4604.chr11.nic	protein_coding	66466896,66468128,66471348,66472369,66473241,66473737,66475598	66467027,66468269,66471371,66472470,66473435,66473925,66477334	Gene ID= ENSG00000174516.14 TPM= 6.42 Transcript Type= NA
chr11	66480013	66509657	66480013	66509657	+	ENST00000532677.5@DPP3	ENST00000532677.5	protein_coding	66480013,66482196,66485173,66486540,66487268,66487914,66491253,66491494,66491698,66492716,66493067,66493541,66495206,66495365,66495630,66497298,66504612,66509079	66480465,66482470,66485262,66486677,66487342,66488007,66491383,66491624,66491756,66492910,66493179,66493633,66495268,66495489,66495750,66497477,66504774,66509657	Gene ID= ENSG00000254986.7 TPM= 49.62 Transcript Type= protein_coding
chr11	66480423	66509657	66480423	66509657	+	transcript4618.chr11.nic@DPP3	transcript4618.chr11.nic	protein_coding	66480423,66482196,66485173,66486540,66487268,66487914,66491253,66491494,66491698,66492716,66493067,66493541,66495206,66495630,66497298,66504612,66509079	66480465,66482470,66485262,66486677,66487342,66488007,66491383,66491624,66491756,66492910,66493179,66493633,66495489,66495750,66497477,66504774,66509657	Gene ID= ENSG00000254986.7 TPM= 9.92 Transcript Type= NA
chr11	66510609	66533627	66510609	66533627	+	ENST00000318312.11@BBS1	ENST00000318312.11	protein_coding	66510609,66511013,66511205,66514406,66515540,66515693,66515861,66519617,66521270,66523456,66523724,66526123,66526649,66529819,66530894,66531656,66531951	66510706,66511089,66511239,66514678,66515586,66515731,66515933,66519748,66521376,66523576,66523882,66526192,66526807,66529952,66531028,66531742,66533627	Gene ID= ENSG00000174483.19 TPM= 56.04 Transcript Type= protein_coding
chr11	66510634	66521927	66510634	66521927	+	transcript4627.chr11.nic@BBS1	transcript4627.chr11.nic	protein_coding	66510634,66511013,66511205,66514406,66515540,66515693,66515861,66519617,66521270	66510706,66511089,66511239,66514678,66515586,66515731,66515933,66519748,66521927	Gene ID= ENSG00000174483.19 TPM= 2.34 Transcript Type= NA
chr11	66520625	66546067	66520625	66546067	-	transcript4632.chr11.nic@ZDHHC24	transcript4632.chr11.nic	protein_coding	66545723,66543704,66526936,66520625	66546067,66543981,66527006,66521466	Gene ID= ENSG00000174165.7 TPM= 2.34 Transcript Type= NA
chr11	66520620	66546067	66520620	66546067	-	transcript4637.chr11.nnic@ZDHHC24	transcript4637.chr11.nnic	protein_coding	66545723,66543704,66520620	66546067,66543981,66521466	Gene ID= ENSG00000174165.7 TPM= 4.67 Transcript Type= NA
chr11	66535898	66546238	66535898	66546238	-	ENST00000310442.4@ZDHHC24	ENST00000310442.4	protein_coding	66545723,66543704,66535898	66546238,66543981,66539824	Gene ID= ENSG00000174165.7 TPM= 16.35 Transcript Type= protein_coding
chr11	66520637	66546036	66520637	66546036	-	ENST00000534073.5@ZDHHC24	ENST00000534073.5	protein_coding	66545723,66543704,66526936,66524155,66520637	66546036,66543981,66527006,66524276,66521466	Gene ID= ENSG00000174165.7 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr11	66563464	66568610	66563464	66568610	-	transcript4655.chr11.nic@CTSF	transcript4655.chr11.nic	protein_coding	66568274,66567984,66567444,66567246,66566291,66566022,66565831,66565671,66564887,66564742,66564088,66563464	66568610,66568082,66567662,66567321,66566404,66566167,66565927,66565751,66565006,66564806,66564648,66564007	Gene ID= ENSG00000174080.10 TPM= 7.24 Transcript Type= NA
chr11	66563463	66568596	66563463	66568596	-	ENST00000310325.9@CTSF	ENST00000310325.9	protein_coding	66568274,66567984,66567444,66567246,66566291,66566022,66565831,66565671,66564887,66564742,66564558,66564088,66563463	66568596,66568082,66567662,66567321,66566404,66566167,66565927,66565751,66565006,66564806,66564648,66564146,66564007	Gene ID= ENSG00000174080.10 TPM= 174.2 Transcript Type= protein_coding
chr11	66590176	66593083	66590176	66593083	-	ENST00000333861.4@CCDC87	ENST00000333861.4	protein_coding	66590176	66593083	Gene ID= ENSG00000182791.4 TPM= 2.34 Transcript Type= protein_coding
chr11	66592821	66606019	66592821	66606019	+	ENST00000533244.5@CCS	ENST00000533244.5	protein_coding	66592821,66593642,66599116,66599459,66600489,66605339,66605489,66605702	66593300,66593714,66599253,66599636,66600549,66605416,66605592,66606019	Gene ID= ENSG00000173992.8 TPM= 40.87 Transcript Type= protein_coding
chr11	66593200	66606019	66593200	66606019	+	transcript4660.chr11.nnic@CCS	transcript4660.chr11.nnic	protein_coding	66593200,66593642,66599116,66600489,66605154,66605339,66605489,66605702	66593300,66593714,66599636,66600549,66605232,66605416,66605592,66606019	Gene ID= ENSG00000173992.8 TPM= 2.34 Transcript Type= NA
chr11	66593204	66606019	66593204	66606019	+	transcript4661.chr11.nic@CCS	transcript4661.chr11.nic	protein_coding	66593204,66593642,66599116,66600489,66605154,66605489,66605702	66593300,66593714,66599636,66600549,66605416,66605592,66606019	Gene ID= ENSG00000173992.8 TPM= 3.5 Transcript Type= NA
chr11	66616582	66627347	66616582	66627347	+	ENST00000310137.4@RBM14	ENST00000310137.4	protein_coding	66616582,66624214,66626461	66617057,66625678,66627347	Gene ID= ENSG00000239306.4 TPM= 61.3 Transcript Type= protein_coding
chr11	66616600	66627337	66616600	66627337	+	transcript4676.chr11.nic@RBM14	transcript4676.chr11.nic	protein_coding	66616600,66624214	66617057,66627337	Gene ID= ENSG00000239306.4 TPM= 5.25 Transcript Type= NA
chr11	66616620	66668385	66616620	66668385	+	transcript4672.chr11.nic@RBM14-RBM4	transcript4672.chr11.nic	protein_coding	66616620,66639700,66665856	66617057,66640123,66668385	Gene ID= ENSG00000248643.5 TPM= 4.09 Transcript Type= NA
chr11	66616670	66646467	66616670	66646467	+	ENST00000500635.2@RBM14-RBM4	ENST00000500635.2	protein_coding	66616670,66646027	66617057,66646467	Gene ID= ENSG00000248643.5 TPM= 4.09 Transcript Type= protein_coding
chr11	66638617	66646469	66638617	66646469	+	ENST00000310092.11@RBM4	ENST00000310092.11	protein_coding	66638617,66639700,66643450,66646027	66638752,66640123,66644140,66646469	Gene ID= ENSG00000173933.19 TPM= 53.71 Transcript Type= protein_coding
chr11	66638698	66646468	66638698	66646468	+	ENST00000398692.8@RBM4	ENST00000398692.8	protein_coding	66638698,66639700,66646027	66638752,66640123,66646468	Gene ID= ENSG00000173933.19 TPM= 12.26 Transcript Type= protein_coding
chr11	66638672	66646452	66638672	66646452	+	ENST00000408993.6@RBM4	ENST00000408993.6	protein_coding	66638672,66639700,66643450,66646027	66638893,66640123,66644140,66646452	Gene ID= ENSG00000173933.19 TPM= 8.17 Transcript Type= protein_coding
chr11	66638718	66649930	66638718	66649930	+	ENST00000506523.6@RBM4	ENST00000506523.6	protein_coding	66638718,66639700,66649736	66638752,66640123,66649930	Gene ID= ENSG00000173933.19 TPM= 1.17 Transcript Type= protein_coding
chr11	66644929	66647942	66644929	66647942	-	transcript4682.chr11.nnic@NA	transcript4682.chr11.nnic	NA	66644929	66647942	Gene ID= novel_gene_chr11_4683 TPM= 3.5 Transcript Type= NA
chr11	66664998	66677921	66664998	66677921	-	ENST00000310046.8@RBM4B	ENST00000310046.8	protein_coding	66677764,66676668,66668615,66664998	66677921,66677091,66669291,66665578	Gene ID= ENSG00000173914.11 TPM= 5.84 Transcript Type= protein_coding
chr11	66666912	66669936	66666912	66669936	-	transcript4686.chr11.nnic@NA	transcript4686.chr11.nnic	NA	66666912	66669936	Gene ID= novel_gene_chr11_4687 TPM= 6.42 Transcript Type= NA
chr11	66744736	66843328	66744736	66843328	+	ENST00000525908.5@C11orf80	ENST00000525908.5	protein_coding	66744736,66748379,66756353,66759043,66788160,66796281,66800641,66801031,66803998,66813865,66816053,66821643,66822564,66828266,66838367,66842849,66843169	66744919,66748517,66756505,66759096,66788269,66796364,66800696,66801102,66804190,66814015,66816199,66821764,66822674,66828364,66838445,66843069,66843328	Gene ID= ENSG00000173715.15 TPM= 1.17 Transcript Type= protein_coding
chr11	66744820	66843322	66744820	66843322	+	transcript4705.chr11.nic@C11orf80	transcript4705.chr11.nic	protein_coding	66744820,66759043,66796281,66800641,66801031,66803995,66813865,66816053,66821643,66822564,66828266,66838367,66842849,66843169	66744919,66759096,66796364,66800696,66801102,66804190,66814015,66816199,66821764,66822674,66828364,66838445,66843069,66843322	Gene ID= ENSG00000173715.15 TPM= 2.34 Transcript Type= NA
chr11	66744787	66843322	66744787	66843322	+	ENST00000540737.5@C11orf80	ENST00000540737.5	protein_coding	66744787,66759043,66788160,66796281,66800641,66801031,66803995,66813865,66816053,66821643,66822564,66828266,66838370,66842849,66843169	66744919,66759096,66788269,66796364,66800696,66801102,66804190,66814015,66816199,66821764,66822674,66828364,66838445,66843069,66843322	Gene ID= ENSG00000173715.15 TPM= 1.17 Transcript Type= protein_coding
chr11	66744771	66843290	66744771	66843290	+	ENST00000527634.5@C11orf80	ENST00000527634.5	protein_coding	66744771,66759043,66796281,66800641,66801031,66803995,66813856,66816053,66821643,66822564,66828266,66838367,66842849,66843169	66744919,66759096,66796364,66800696,66801102,66804184,66814015,66816199,66821764,66822674,66828364,66838445,66843069,66843290	Gene ID= ENSG00000173715.15 TPM= 3.5 Transcript Type= protein_coding
chr11	66843412	66846546	66843412	66846546	+	ENST00000309657.7@RCE1	ENST00000309657.7	protein_coding	66843412,66843759,66843956,66844286,66844869,66845166,66845500,66845860	66843640,66843861,66844039,66844364,66845036,66845237,66845562,66846546	Gene ID= ENSG00000173653.7 TPM= 31.53 Transcript Type= protein_coding
chr11	66843419	66846526	66843419	66846526	+	transcript4714.chr11.nic@RCE1	transcript4714.chr11.nic	protein_coding	66843419,66843759,66843956,66844286,66844869,66845166	66843640,66843861,66844039,66844364,66845036,66846526	Gene ID= ENSG00000173653.7 TPM= 2.34 Transcript Type= NA
chr11	66843437	66846528	66843437	66846528	+	ENST00000524506.5@RCE1	ENST00000524506.5	protein_coding	66843437,66843759,66843956,66844286,66844869,66845166,66845860	66843640,66843861,66844039,66844364,66845036,66845237,66846528	Gene ID= ENSG00000173653.7 TPM= 2.34 Transcript Type= protein_coding
chr11	66843451	66846532	66843451	66846532	+	ENST00000524849.5@RCE1	ENST00000524849.5	protein_coding	66843451,66843759,66843960,66844286,66844869,66845166,66845500,66845860	66843640,66843861,66844039,66844364,66845036,66845237,66845562,66846532	Gene ID= ENSG00000173653.7 TPM= 7.01 Transcript Type= nonsense_mediated_decay
chr11	66848526	66958376	66848526	66958376	-	ENST00000393960.5@PC	ENST00000393960.5	protein_coding	66958322,66954249,66952430,66872024,66871687,66871315,66871052,66870775,66870302,66868846,66866187,66863774,66853239,66852747,66852439,66851790,66851040,66850674,66850220,66849937,66849611,66849230,66848526	66958376,66954436,66952468,66872159,66871871,66871480,66871197,66870892,66870453,66868964,66866349,66863956,66853383,66852836,66852660,66851946,66851280,66850923,66850464,66850116,66849859,66849370,66849147	Gene ID= ENSG00000173599.13 TPM= 4.67 Transcript Type= protein_coding
chr11	66848525	66958376	66848525	66958376	-	ENST00000393958.6@PC	ENST00000393958.6	protein_coding	66958322,66952430,66872024,66871687,66871315,66871052,66870775,66870302,66868846,66866187,66863774,66853239,66852747,66852439,66851790,66851040,66850674,66850220,66849937,66849611,66849230,66848525	66958376,66952468,66872159,66871871,66871480,66871197,66870892,66870453,66868964,66866349,66863956,66853383,66852836,66852660,66851946,66851280,66850923,66850464,66850116,66849859,66849370,66849147	Gene ID= ENSG00000173599.13 TPM= 30.36 Transcript Type= protein_coding
chr11	66856588	66860475	66856588	66860475	+	transcript4722.chr11.nic@LRFN4	transcript4722.chr11.nic	protein_coding	66856588,66857735,66859637	66857296,66859093,66860475	Gene ID= ENSG00000173621.8 TPM= 14.01 Transcript Type= NA
chr11	66857502	66860475	66857502	66860475	+	ENST00000309602.4@LRFN4	ENST00000309602.4	protein_coding	66857502,66859637	66859093,66860475	Gene ID= ENSG00000173621.8 TPM= 18.68 Transcript Type= protein_coding
chr11	67056818	67072013	67056818	67072013	+	ENST00000308831.6@RHOD	ENST00000308831.6	protein_coding	67056818,67065896,67066738,67070425,67071435	67057034,67065983,67066847,67070559,67072013	Gene ID= ENSG00000173156.6 TPM= 21.02 Transcript Type= protein_coding
chr11	67240047	67256373	67240047	67256373	+	ENST00000530342.2@KDM2A	ENST00000530342.2	protein_coding	67240047,67243009,67245189,67245985,67248281,67250086,67252694,67253453,67254203,67254874	67240369,67243092,67245458,67246116,67248370,67250798,67252857,67253611,67254418,67256373	Gene ID= ENSG00000173120.14 TPM= 5.84 Transcript Type= protein_coding
chr11	67128011	67129413	67128011	67129413	-	transcript4739.chr11.nnic@NA	transcript4739.chr11.nnic	NA	67128011	67129413	Gene ID= novel_gene_chr11_4740 TPM= 10.51 Transcript Type= NA
chr11	67266380	67286556	67266380	67286556	+	transcript4743.chr11.nnic@GRK2	transcript4743.chr11.nnic	protein_coding	67266380,67277272,67279200,67279418,67279626,67279839,67280495,67281093,67281459,67281650,67281822,67282271,67282435,67282752,67283128,67283707,67283854,67284211,67284847,67285075,67285286	67266812,67277348,67279273,67279519,67279700,67279900,67280783,67281184,67281558,67281728,67281952,67282365,67282542,67282818,67283228,67283773,67283949,67284373,67284983,67285188,67286556	Gene ID= ENSG00000173020.10 TPM= 22.77 Transcript Type= NA
chr11	67266410	67286556	67266410	67286556	+	ENST00000308595.9@GRK2	ENST00000308595.9	protein_coding	67266410,67277272,67279200,67279418,67279626,67279839,67280732,67281093,67281459,67281650,67281822,67282271,67282435,67282752,67283128,67283707,67283854,67284211,67284847,67285075,67285286	67266812,67277348,67279273,67279519,67279700,67279900,67280783,67281184,67281558,67281728,67281952,67282365,67282542,67282818,67283228,67283773,67283949,67284373,67284983,67285188,67286556	Gene ID= ENSG00000173020.10 TPM= 383.55 Transcript Type= protein_coding
chr11	67268359	67270801	67268359	67270801	-	transcript4821.chr11.nnic@NA	transcript4821.chr11.nnic	NA	67268359	67270801	Gene ID= novel_gene_chr11_4822 TPM= 7.01 Transcript Type= NA
chr11	67274497	67277258	67274497	67277258	-	transcript4823.chr11.nnic@NA	transcript4823.chr11.nnic	NA	67274497	67277258	Gene ID= novel_gene_chr11_4824 TPM= 15.18 Transcript Type= NA
chr11	67288547	67302481	67288547	67302481	+	ENST00000447274.6@ANKRD13D	ENST00000447274.6	protein_coding	67288547,67290078,67290322,67291476,67291603,67291991,67299058,67299530,67299827,67299993,67300990,67301282,67301488,67301732,67302119	67289550,67290213,67290446,67291521,67291746,67292180,67299124,67299611,67299888,67300123,67301147,67301398,67301651,67301823,67302481	Gene ID= ENSG00000172932.14 TPM= 14.4 Transcript Type= protein_coding
chr11	67289117	67302484	67289117	67302484	+	transcript4780.chr11.nic@ANKRD13D	transcript4780.chr11.nic	protein_coding	67289117,67290078,67290322,67291476,67291603,67291991,67299058,67299530,67299827,67299993,67300990,67301282,67301732,67302119	67289550,67290213,67290446,67291521,67291746,67292180,67299124,67299611,67299888,67300123,67301147,67301651,67301823,67302484	Gene ID= ENSG00000172932.14 TPM= 2.72 Transcript Type= NA
chr11	67289316	67291375	67289316	67291375	+	transcript4811.chr11.nic@ANKRD13D	transcript4811.chr11.nic	protein_coding	67289316,67289829,67290078,67290322,67290592	67289550,67289965,67290213,67290446,67291375	Gene ID= ENSG00000172932.14 TPM= 3.5 Transcript Type= NA
chr11	67289330	67291375	67289330	67291375	+	transcript4814.chr11.nic@ANKRD13D	transcript4814.chr11.nic	protein_coding	67289330,67290322,67290592	67290213,67290446,67291375	Gene ID= ENSG00000172932.14 TPM= 2.34 Transcript Type= NA
chr11	67288554	67291375	67288554	67291375	+	transcript4818.chr11.nic@ANKRD13D	transcript4818.chr11.nic	protein_coding	67288554,67290322	67290213,67291375	Gene ID= ENSG00000172932.14 TPM= 2.34 Transcript Type= NA
chr11	67289348	67302483	67289348	67302483	+	ENST00000308440.10@ANKRD13D	ENST00000308440.10	protein_coding	67289348,67289829,67290078,67290322,67291476,67291603,67291991,67299058,67299530,67299827,67299993,67300990,67301282,67301488,67301732,67302119	67289550,67289965,67290213,67290446,67291521,67291746,67292180,67299124,67299611,67299888,67300123,67301147,67301398,67301651,67301823,67302483	Gene ID= ENSG00000172932.14 TPM= 10.89 Transcript Type= protein_coding
chr11	67303448	67312600	67303448	67312600	+	ENST00000308127.8@SSH3	ENST00000308127.8	protein_coding	67303448,67304118,67304773,67306838,67307042,67307371,67307549,67307846,67308174,67308412,67309397,67309768,67310066,67311591	67303691,67304155,67305007,67306962,67307113,67307436,67307737,67307939,67308302,67308458,67309543,67309968,67310339,67312600	Gene ID= ENSG00000172830.12 TPM= 28.41 Transcript Type= protein_coding
chr11	67303503	67312592	67303503	67312592	+	transcript4792.chr11.nic@SSH3	transcript4792.chr11.nic	protein_coding	67303503,67304118,67304773,67306838,67307042,67307371,67307846,67308174,67308412,67309397,67309768,67310164,67311591	67303691,67304155,67305007,67306962,67307113,67307737,67307939,67308302,67308458,67309543,67309968,67310339,67312592	Gene ID= ENSG00000172830.12 TPM= 3.5 Transcript Type= NA
chr11	67303553	67312592	67303553	67312592	+	transcript4799.chr11.nnic@SSH3	transcript4799.chr11.nnic	protein_coding	67303553,67304049,67304773,67306838,67307042,67307371,67308219,67308412,67309397,67309768,67310066,67311591	67303691,67304155,67305007,67306962,67307113,67307939,67308302,67308458,67309543,67309968,67310339,67312592	Gene ID= ENSG00000172830.12 TPM= 3.89 Transcript Type= NA
chr11	67303503	67312592	67303503	67312592	+	transcript4800.chr11.nic@SSH3	transcript4800.chr11.nic	protein_coding	67303503,67304118,67304773,67306838,67307042,67307371,67308174,67308412,67309397,67309768,67310066,67311591	67303691,67304155,67305007,67306962,67307113,67307939,67308302,67308458,67309543,67309968,67310339,67312592	Gene ID= ENSG00000172830.12 TPM= 4.47 Transcript Type= NA
chr11	67309349	67312606	67309349	67312606	+	transcript4819.chr11.nnic@NA	transcript4819.chr11.nnic	NA	67309349	67312606	Gene ID= novel_gene_chr11_4820 TPM= 5.25 Transcript Type= NA
chr11	67351548	67353534	67351548	67353534	-	transcript4832.chr11.nic@POLD4	transcript4832.chr11.nic	protein_coding	67353303,67352988,67351548	67353534,67353077,67352802	Gene ID= ENSG00000175482.8 TPM= 3.5 Transcript Type= NA
chr11	67350777	67353579	67350777	67353579	-	ENST00000529704.5@POLD4	ENST00000529704.5	protein_coding	67353539,67352988,67352691,67350777	67353579,67353077,67352802,67352019	Gene ID= ENSG00000175482.8 TPM= 2.34 Transcript Type= protein_coding
chr11	67351548	67353078	67351548	67353078	-	ENST00000533429.1@POLD4	ENST00000533429.1	protein_coding	67352691,67351548	67353078,67352019	Gene ID= ENSG00000175482.8 TPM= 14.4 Transcript Type= retained_intron
chr11	67351548	67353301	67351548	67353301	-	transcript4826.chr11.nnic@AP003419.2	transcript4826.chr11.nnic	protein_coding	67353183,67352988,67352691,67351548	67353301,67353077,67352802,67352019	Gene ID= ENSG00000256514.1 TPM= 18.48 Transcript Type= NA
chr11	67351548	67353575	67351548	67353575	-	transcript4830.chr11.nic@AP003419.2	transcript4830.chr11.nic	protein_coding	67352988,67352691,67351548	67353575,67352802,67352019	Gene ID= ENSG00000256514.1 TPM= 33.66 Transcript Type= NA
chr11	67364168	67373737	67364168	67373737	-	ENST00000312438.7@CLCF1	ENST00000312438.7	protein_coding	67373524,67367460,67364168	67373737,67367626,67365630	Gene ID= ENSG00000175505.10 TPM= 8.17 Transcript Type= protein_coding
chr11	67391952	67398409	67391952	67398409	+	ENST00000307980.6@RAD9A	ENST00000307980.6	protein_coding	67391952,67392161,67392654,67393496,67393691,67395716,67395912,67396111,67396263,67397179,67397464	67392078,67392231,67392782,67393610,67393790,67395825,67396021,67396175,67396400,67397386,67398409	Gene ID= ENSG00000172613.7 TPM= 9.34 Transcript Type= protein_coding
chr11	67398183	67401853	67398183	67401853	-	transcript4853.chr11.nic@PPP1CA	transcript4853.chr11.nic	protein_coding	67401728,67401068,67400689,67398722,67398183	67401853,67401199,67400919,67399665,67398645	Gene ID= ENSG00000172531.14 TPM= 20.14 Transcript Type= NA
chr11	67398201	67401931	67398201	67401931	-	ENST00000376745.8@PPP1CA	ENST00000376745.8	protein_coding	67401728,67401068,67400689,67399561,67398940,67398722,67398201	67401931,67401199,67400919,67399665,67399163,67398856,67398645	Gene ID= ENSG00000172531.14 TPM= 309.7 Transcript Type= protein_coding
chr11	67398201	67401577	67398201	67401577	-	ENST00000532446.5@PPP1CA	ENST00000532446.5	protein_coding	67401385,67401068,67400689,67399561,67398940,67398722,67398201	67401577,67401199,67400919,67399665,67399163,67398856,67398645	Gene ID= ENSG00000172531.14 TPM= 1.46 Transcript Type= processed_transcript
chr11	67398201	67401604	67398201	67401604	-	ENST00000526510.5@PPP1CA	ENST00000526510.5	protein_coding	67401068,67400689,67399561,67398940,67398722,67398201	67401604,67400919,67399665,67399163,67398856,67398645	Gene ID= ENSG00000172531.14 TPM= 10.8 Transcript Type= retained_intron
chr11	67403783	67410089	67403783	67410089	+	transcript4855.chr11.nnic@TBC1D10C	transcript4855.chr11.nnic	protein_coding	67403783,67404119,67405085,67405399,67405595,67405903,67406627,67406827,67408979,67409407	67403940,67404354,67405184,67405506,67405701,67406017,67406692,67407016,67409133,67410089	Gene ID= ENSG00000175463.11 TPM= 9.06 Transcript Type= NA
chr11	67403815	67410089	67403815	67410089	+	transcript4856.chr11.nic@TBC1D10C	transcript4856.chr11.nic	protein_coding	67403815,67404191,67405085,67405399,67405595,67405903,67406627,67406827,67408979,67409407	67403940,67404354,67405184,67405506,67405701,67406017,67406692,67407016,67409133,67410089	Gene ID= ENSG00000175463.11 TPM= 6.73 Transcript Type= NA
chr11	67403808	67410089	67403808	67410089	+	transcript4860.chr11.nnic@TBC1D10C	transcript4860.chr11.nnic	protein_coding	67403808,67405085,67405399,67405595,67405903,67406627,67406827,67408979,67409407	67403957,67405184,67405506,67405701,67406017,67406692,67407016,67409133,67410089	Gene ID= ENSG00000175463.11 TPM= 4.39 Transcript Type= NA
chr11	67403909	67410089	67403909	67410089	+	transcript4861.chr11.nic@TBC1D10C	transcript4861.chr11.nic	protein_coding	67403909,67404191,67405085,67405399,67405595,67405903,67406627,67408979,67409407	67403940,67404354,67405184,67405506,67405701,67406017,67407016,67409133,67410089	Gene ID= ENSG00000175463.11 TPM= 4.39 Transcript Type= NA
chr11	67403916	67410089	67403916	67410089	+	transcript4863.chr11.nnic@TBC1D10C	transcript4863.chr11.nnic	protein_coding	67403916,67404119,67405085,67405399,67405595,67405903,67406627,67408979,67409407	67403957,67404354,67405184,67405506,67405701,67406017,67407016,67409133,67410089	Gene ID= ENSG00000175463.11 TPM= 5.56 Transcript Type= NA
chr11	67403928	67410089	67403928	67410089	+	transcript4868.chr11.nic@TBC1D10C	transcript4868.chr11.nic	protein_coding	67403928,67405085,67405399,67405595,67405903,67406627,67408979,67409407	67404354,67405184,67405506,67405701,67406017,67407016,67409133,67410089	Gene ID= ENSG00000175463.11 TPM= 7.89 Transcript Type= NA
chr11	67404968	67410089	67404968	67410089	+	transcript4874.chr11.nic@TBC1D10C	transcript4874.chr11.nic	protein_coding	67404968,67405399,67405595,67405903,67406627,67406827,67408979,67409407	67405184,67405506,67405701,67406017,67406692,67407016,67409133,67410089	Gene ID= ENSG00000175463.11 TPM= 4.39 Transcript Type= NA
chr11	67403928	67410089	67403928	67410089	+	transcript4877.chr11.nic@TBC1D10C	transcript4877.chr11.nic	protein_coding	67403928,67405085,67405399,67405595,67405903,67408979,67409407	67404354,67405184,67405506,67405701,67407016,67409133,67410089	Gene ID= ENSG00000175463.11 TPM= 4.9 Transcript Type= NA
chr11	67404189	67410058	67404189	67410058	+	ENST00000542590.1@TBC1D10C	ENST00000542590.1	protein_coding	67404189,67405085,67405399,67405595,67405903,67406627,67406827,67408979,67409407	67404354,67405184,67405506,67405701,67406017,67406692,67407016,67409133,67410058	Gene ID= ENSG00000175463.11 TPM= 15.18 Transcript Type= protein_coding
chr11	67422389	67425604	67422389	67425604	+	transcript4889.chr11.nnic@NA	transcript4889.chr11.nnic	NA	67422389	67425604	Gene ID= novel_gene_chr11_4890 TPM= 4.67 Transcript Type= NA
chr11	67428444	67435408	67428444	67435408	+	transcript4891.chr11.nic@RPS6KB2	transcript4891.chr11.nic	protein_coding	67428444,67428982,67429120,67429527,67431368,67432353,67432600,67432737,67432952,67433126,67433340,67433995,67434198,67434377,67434582,67434989	67428623,67429022,67429240,67429595,67431515,67432492,67432657,67432837,67433042,67433194,67433447,67434057,67434275,67434484,67434694,67435408	Gene ID= ENSG00000175634.14 TPM= 4.29 Transcript Type= NA
chr11	67428444	67435408	67428444	67435408	+	transcript4898.chr11.nic@RPS6KB2	transcript4898.chr11.nic	protein_coding	67428444,67428982,67429120,67429527,67431368,67432737,67432952,67433126,67433340,67433995,67434198,67434377,67434582,67434989	67428623,67429022,67429240,67429595,67432657,67432837,67433042,67433194,67433447,67434057,67434275,67434484,67434694,67435408	Gene ID= ENSG00000175634.14 TPM= 5.84 Transcript Type= NA
chr11	67434582	67443910	67434582	67443910	+	transcript4930.chr11.nnic@RPS6KB2	transcript4930.chr11.nnic	protein_coding	67434582,67437322	67434694,67443910	Gene ID= ENSG00000175634.14 TPM= 4.67 Transcript Type= NA
chr11	67428501	67435408	67428501	67435408	+	ENST00000312629.9@RPS6KB2	ENST00000312629.9	protein_coding	67428501,67428982,67429120,67429527,67431368,67432600,67432737,67432952,67433126,67433340,67433995,67434198,67434377,67434582,67434989	67428623,67429022,67429240,67429595,67431515,67432657,67432837,67433042,67433216,67433447,67434057,67434275,67434484,67434694,67435408	Gene ID= ENSG00000175634.14 TPM= 47.49 Transcript Type= protein_coding
chr11	67438048	67443821	67438048	67443821	-	ENST00000393893.5@CORO1B	ENST00000393893.5	protein_coding	67443753,67443404,67442428,67441966,67441733,67441333,67441125,67440335,67440118,67439786,67438671,67438048	67443821,67443465,67442630,67442088,67441862,67441514,67441244,67440439,67440263,67439843,67438949,67438501	Gene ID= ENSG00000172725.13 TPM= 373.63 Transcript Type= protein_coding
chr11	67438076	67443512	67438076	67443512	-	ENST00000341356.9@CORO1B	ENST00000341356.9	protein_coding	67443404,67442428,67441966,67441733,67441333,67441125,67440335,67440118,67439786,67438671,67438076	67443512,67442630,67442088,67441862,67441514,67441244,67440439,67440263,67439843,67438949,67438501	Gene ID= ENSG00000172725.13 TPM= 33.86 Transcript Type= protein_coding
chr11	67438082	67443456	67438082	67443456	-	ENST00000537042.5@CORO1B	ENST00000537042.5	protein_coding	67443404,67442428,67441966,67441733,67441333,67441125,67440702,67440335,67440118,67439786,67438671,67438082	67443456,67442630,67442088,67441862,67441514,67441244,67440836,67440439,67440263,67439843,67438949,67438501	Gene ID= ENSG00000172725.13 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr11	67464353	67469273	67464353	67469273	-	transcript4933.chr11.nic@TMEM134	transcript4933.chr11.nic	protein_coding	67469019,67468028,67467501,67467312,67465056,67464803,67464353	67469273,67468092,67467563,67467388,67465100,67464856,67464696	Gene ID= ENSG00000172663.8 TPM= 9.73 Transcript Type= NA
chr11	67464353	67469273	67464353	67469273	-	transcript4934.chr11.nic@TMEM134	transcript4934.chr11.nic	protein_coding	67469019,67468017,67467501,67467312,67465056,67464803,67464353	67469273,67468092,67467590,67467388,67465100,67464856,67464696	Gene ID= ENSG00000172663.8 TPM= 3.89 Transcript Type= NA
chr11	67464353	67469273	67464353	67469273	-	transcript4942.chr11.nic@TMEM134	transcript4942.chr11.nic	protein_coding	67469019,67468028,67467501,67465056,67464803,67464353	67469273,67468092,67467563,67467388,67464856,67464696	Gene ID= ENSG00000172663.8 TPM= 4.67 Transcript Type= NA
chr11	67464353	67469239	67464353	67469239	-	ENST00000545682.5@TMEM134	ENST00000545682.5	protein_coding	67469019,67468028,67467501,67467312,67465056,67464803,67464353	67469239,67468092,67467590,67467388,67465267,67464856,67464696	Gene ID= ENSG00000172663.8 TPM= 7.39 Transcript Type= nonsense_mediated_decay
chr11	67483041	67491103	67483041	67491103	+	ENST00000279146.7@AIP	ENST00000279146.7	protein_coding	67483041,67487006,67489267,67490038,67490316,67490788	67483257,67487185,67489455,67490214,67490457,67491103	Gene ID= ENSG00000110711.9 TPM= 173.97 Transcript Type= protein_coding
chr11	67491768	67505379	67491768	67505379	-	transcript4949.chr11.nnic@PITPNM1	transcript4949.chr11.nnic	protein_coding	67505188,67504103,67503737,67502504,67502292,67501862,67500095,67499914,67499723,67498940,67498596,67498133,67497917,67497522,67497231,67496178,67495438,67495077,67494846,67494244,67493922,67493688,67493410,67492934,67491768	67505379,67504221,67503876,67502718,67502413,67502086,67500421,67500009,67499830,67499001,67498846,67498322,67498024,67497679,67497436,67496348,67495602,67495225,67494956,67494360,67494070,67493837,67493593,67493062,67492296	Gene ID= ENSG00000110697.12 TPM= 63.05 Transcript Type= NA
chr11	67491769	67505372	67491769	67505372	-	ENST00000356404.7@PITPNM1	ENST00000356404.7	protein_coding	67505188,67504103,67502504,67502292,67501862,67500095,67499914,67499723,67498940,67498596,67498133,67497917,67497522,67497231,67496178,67495438,67495077,67494846,67494244,67493922,67493688,67493410,67492934,67491769	67505372,67504221,67502718,67502413,67502086,67500421,67500009,67499830,67499001,67498846,67498322,67498024,67497679,67497436,67496348,67495602,67495225,67494956,67494360,67494070,67493837,67493593,67493062,67492296	Gene ID= ENSG00000110697.12 TPM= 24.52 Transcript Type= protein_coding
chr11	67506497	67508690	67506497	67508690	-	transcript4965.chr11.nnic@CDK2AP2	transcript4965.chr11.nnic	protein_coding	67507850,67507592,67507365,67506497	67508690,67507689,67507497,67507012	Gene ID= ENSG00000167797.7 TPM= 5.45 Transcript Type= NA
chr11	67506497	67508631	67506497	67508631	-	ENST00000301488.7@CDK2AP2	ENST00000301488.7	protein_coding	67508001,67507592,67507365,67506497	67508631,67507689,67507497,67507012	Gene ID= ENSG00000167797.7 TPM= 132.72 Transcript Type= protein_coding
chr11	67506512	67508649	67506512	67508649	-	ENST00000525402.5@CDK2AP2	ENST00000525402.5	protein_coding	67507592,67507365,67506512	67508649,67507497,67507012	Gene ID= ENSG00000167797.7 TPM= 11.29 Transcript Type= retained_intron
chr11	67583595	67586660	67583595	67586660	+	ENST00000398606.7@GSTP1	ENST00000398606.7	protein_coding	67583595,67584134,67584464,67584685,67585138,67586104,67586389	67583844,67584169,67584570,67584772,67585241,67586211,67586660	Gene ID= ENSG00000084207.15 TPM= 696.47 Transcript Type= protein_coding
chr11	67583814	67586652	67583814	67586652	+	transcript4986.chr11.nnic@NA	transcript4986.chr11.nnic	NA	67583814	67586652	Gene ID= novel_gene_chr11_4987 TPM= 5.84 Transcript Type= NA
chr11	67606907	67612535	67606907	67612535	+	transcript4998.chr11.nic@NDUFV1	transcript4998.chr11.nic	protein_coding	67606907,67608552,67609452,67610381,67610995,67611403,67611897,67612120,67612372	67608478,67608722,67609635,67610570,67611207,67611569,67611978,67612265,67612535	Gene ID= ENSG00000167792.11 TPM= 11.45 Transcript Type= NA
chr11	67606900	67612535	67606900	67612535	+	transcript5000.chr11.nic@NDUFV1	transcript5000.chr11.nic	protein_coding	67606900,67609452,67610381,67610995,67611403,67611897,67612120,67612372	67608722,67609635,67610570,67611207,67611569,67611978,67612265,67612535	Gene ID= ENSG00000167792.11 TPM= 14.96 Transcript Type= NA
chr11	67606907	67612535	67606907	67612535	+	transcript5001.chr11.nic@NDUFV1	transcript5001.chr11.nic	protein_coding	67606907,67608552,67609452,67610381,67611403,67611897,67612120,67612372	67608478,67608722,67609635,67611207,67611569,67611978,67612265,67612535	Gene ID= ENSG00000167792.11 TPM= 11.07 Transcript Type= NA
chr11	67606907	67612535	67606907	67612535	+	transcript5003.chr11.nic@NDUFV1	transcript5003.chr11.nic	protein_coding	67606907,67608552,67609452,67611403,67611897,67612120,67612372	67608478,67608722,67611207,67611569,67611978,67612265,67612535	Gene ID= ENSG00000167792.11 TPM= 9.32 Transcript Type= NA
chr11	67606852	67612506	67606852	67612506	+	ENST00000322776.10@NDUFV1	ENST00000322776.10	protein_coding	67606852,67608396,67608552,67609452,67610381,67610995,67611403,67611897,67612120,67612372	67607076,67608478,67608722,67609635,67610570,67611207,67611569,67611978,67612265,67612506	Gene ID= ENSG00000167792.11 TPM= 134.27 Transcript Type= protein_coding
chr11	67606944	67612535	67606944	67612535	+	ENST00000415352.6@NDUFV1	ENST00000415352.6	protein_coding	67606944,67608396,67608552,67609452,67610381,67610995,67611403,67611897,67612120,67612372	67607055,67608478,67608722,67609635,67610570,67611207,67611569,67611978,67612265,67612535	Gene ID= ENSG00000167792.11 TPM= 28.38 Transcript Type= protein_coding
chr11	67627939	67629921	67627939	67629921	-	ENST00000534054.1@NUDT8	ENST00000534054.1	protein_coding	67628919,67627939	67629921,67628400	Gene ID= ENSG00000167799.9 TPM= 1.17 Transcript Type= retained_intron
chr11	67627938	67629930	67627938	67629930	-	ENST00000301490.8@NUDT8	ENST00000301490.8	protein_coding	67629718,67628919,67627938	67629930,67629051,67628400	Gene ID= ENSG00000167799.9 TPM= 7.01 Transcript Type= protein_coding
chr11	67627939	67629921	67627939	67629921	-	ENST00000376693.2@NUDT8	ENST00000376693.2	protein_coding	67629718,67628919,67628323,67627939	67629921,67629051,67628400,67628251	Gene ID= ENSG00000167799.9 TPM= 3.5 Transcript Type= protein_coding
chr11	67642555	67650659	67642555	67650659	-	ENST00000255082.7@ACY3	ENST00000255082.7	protein_coding	67650583,67647516,67646808,67645692,67645287,67645045,67644760,67642555	67650659,67647589,67647063,67645887,67645380,67645152,67644869,67642939	Gene ID= ENSG00000132744.7 TPM= 2.34 Transcript Type= protein_coding
chr11	67791767	67805334	67791767	67805334	-	ENST00000529253.5@FAM86C2P	ENST00000529253.5	transcribed_unprocessed_pseudogene	67805218,67803002,67796684,67791767	67805334,67803064,67796833,67793293	Gene ID= ENSG00000160172.10 TPM= 1.17 Transcript Type= processed_transcript
chr11	67845200	67848709	67845200	67848709	-	transcript5023.chr11.nnic@NA	transcript5023.chr11.nnic	NA	67845200	67848709	Gene ID= novel_gene_chr11_5024 TPM= 8.17 Transcript Type= NA
chr11	67991104	68004123	67991104	68004123	-	ENST00000227471.6@UNC93B1	ENST00000227471.6	protein_coding	68003948,68003657,68003022,67999519,67999173,67998359,67997675,67996602,67995611,67993676,67991104	68004123,68003798,68003175,67999680,67999305,67998452,67997799,67996784,67995884,67993794,67991857	Gene ID= ENSG00000110057.7 TPM= 316.71 Transcript Type= protein_coding
chr11	67991104	68004144	67991104	68004144	-	transcript5034.chr11.nic@UNC93B1	transcript5034.chr11.nic	protein_coding	68003657,68003022,67999519,67999173,67998359,67997675,67996602,67995611,67993676,67991104	68004144,68003175,67999680,67999305,67998452,67997799,67996784,67995884,67993794,67991857	Gene ID= ENSG00000110057.7 TPM= 25.98 Transcript Type= NA
chr11	67991104	68004146	67991104	68004146	-	transcript5036.chr11.nic@UNC93B1	transcript5036.chr11.nic	protein_coding	68003948,68003657,68003022,67999173,67998359,67997675,67996602,67995611,67993676,67991104	68004146,68003798,68003175,67999680,67998452,67997799,67996784,67995884,67993794,67991857	Gene ID= ENSG00000110057.7 TPM= 16.05 Transcript Type= NA
chr11	68010262	68029276	68010262	68029276	+	transcript5049.chr11.nnic@ALDH3B1	transcript5049.chr11.nnic	protein_coding	68010262,68015297,68018527,68018773,68019160,68019715,68021485,68022595,68026009,68027749	68010392,68015459,68018637,68018887,68019255,68019796,68021871,68022761,68026108,68029276	Gene ID= ENSG00000006534.15 TPM= 27.44 Transcript Type= NA
chr11	68010352	68029276	68010352	68029276	+	ENST00000342456.10@ALDH3B1	ENST00000342456.10	protein_coding	68010352,68015297,68018527,68018773,68019170,68019715,68021485,68022595,68026009,68027749	68010392,68015459,68018637,68018893,68019255,68019796,68021871,68022761,68026108,68029276	Gene ID= ENSG00000006534.15 TPM= 75.31 Transcript Type= protein_coding
chr11	68008578	68028696	68008578	68028696	+	ENST00000614849.4@ALDH3B1	ENST00000614849.4	protein_coding	68008578,68015297,68018527,68018773,68019170,68019715,68021485,68022595,68026009,68027749	68008692,68015459,68018637,68018893,68019255,68019796,68021871,68022761,68026108,68028696	Gene ID= ENSG00000006534.15 TPM= 4.67 Transcript Type= protein_coding
chr11	68012014	68016097	68012014	68016097	+	transcript5065.chr11.nnic@NA	transcript5065.chr11.nnic	NA	68012014	68016097	Gene ID= novel_gene_chr11_5066 TPM= 2.34 Transcript Type= NA
chr11	68030627	68036644	68030627	68036644	+	ENST00000313468.9@NDUFS8	ENST00000313468.9	protein_coding	68030627,68032152,68032286,68032923,68033111,68036253,68036462	68030733,68032209,68032336,68033012,68033283,68036381,68036644	Gene ID= ENSG00000110717.12 TPM= 138.56 Transcript Type= protein_coding
chr11	68030724	68036644	68030724	68036644	+	transcript5072.chr11.nic@NDUFS8	transcript5072.chr11.nic	protein_coding	68030724,68032152,68032286,68032923,68033111,68036253,68036462	68030961,68032209,68032336,68033012,68033283,68036381,68036644	Gene ID= ENSG00000110717.12 TPM= 20.63 Transcript Type= NA
chr11	68030681	68036644	68030681	68036644	+	transcript5074.chr11.nic@NDUFS8	transcript5074.chr11.nic	protein_coding	68030681,68032152,68032286,68033111,68036253,68036462	68030733,68032209,68033012,68033283,68036381,68036644	Gene ID= ENSG00000110717.12 TPM= 7.79 Transcript Type= NA
chr11	68038979	68050895	68038979	68050895	+	transcript5085.chr11.nic@TCIRG1	transcript5085.chr11.nic	protein_coding	68038979,68039792,68041268,68041753,68042643,68042946,68043371,68043571,68043814,68044132,68044958,68047433,68047647,68047882,68048879,68049081,68049663,68049962,68050137,68050487,68050741	68039119,68039962,68041388,68041831,68042863,68043031,68043497,68043653,68043907,68044344,68045102,68047572,68047804,68047972,68048997,68049294,68049788,68050066,68050254,68050664,68050895	Gene ID= ENSG00000110719.9 TPM= 41.76 Transcript Type= NA
chr11	68038977	68050895	68038977	68050895	+	transcript5124.chr11.nnic@TCIRG1	transcript5124.chr11.nnic	protein_coding	68038977,68041268,68041753,68042643,68042946,68043571,68043814,68044132,68044958,68047433,68047647,68047882,68048879,68049081,68049663,68049962,68050137,68050487,68050741	68039119,68041388,68041831,68042863,68043497,68043653,68043907,68044344,68045102,68047572,68047804,68047972,68048997,68049437,68049788,68050066,68050254,68050664,68050895	Gene ID= ENSG00000110719.9 TPM= 21.9 Transcript Type= NA
chr11	68038977	68050895	68038977	68050895	+	transcript5145.chr11.nic@TCIRG1	transcript5145.chr11.nic	protein_coding	68038977,68041268,68041753,68042643,68042946,68043571,68043814,68044132,68044958,68047433,68047647,68047882,68048879,68049081,68049962,68050137,68050487,68050741	68039119,68041388,68041831,68042863,68043497,68043653,68043907,68044344,68045102,68047572,68047804,68047972,68048997,68049788,68050066,68050254,68050664,68050895	Gene ID= ENSG00000110719.9 TPM= 41.57 Transcript Type= NA
chr11	68039016	68050895	68039016	68050895	+	ENST00000265686.7@TCIRG1	ENST00000265686.7	protein_coding	68039016,68041268,68041753,68042643,68042946,68043371,68043571,68043814,68044132,68044958,68047433,68047647,68047882,68048879,68049081,68049663,68049962,68050137,68050487,68050741	68039119,68041388,68041831,68042863,68043031,68043497,68043653,68043907,68044344,68045102,68047572,68047804,68047972,68048997,68049294,68049788,68050066,68050254,68050664,68050895	Gene ID= ENSG00000110719.9 TPM= 229.75 Transcript Type= protein_coding
chr11	68042980	68050895	68042980	68050895	+	ENST00000532635.5@TCIRG1	ENST00000532635.5	protein_coding	68042980,68043571,68043814,68044132,68044958,68047433,68047647,68047882,68048879,68049081,68049663,68049962,68050137,68050487,68050741	68043497,68043653,68043907,68044344,68045102,68047572,68047804,68047972,68048997,68049294,68049788,68050066,68050254,68050664,68050895	Gene ID= ENSG00000110719.9 TPM= 48.77 Transcript Type= protein_coding
chr11	68045558	68049633	68045558	68049633	-	transcript5215.chr11.nnic@NA	transcript5215.chr11.nnic	NA	68045558	68049633	Gene ID= novel_gene_chr11_5216 TPM= 36.2 Transcript Type= NA
chr11	68052859	68121410	68052859	68121410	-	transcript5179.chr11.nnic@CHKA	transcript5179.chr11.nnic	protein_coding	68120828,68097019,68090979,68089821,68082491,68081727,68081404,68074717,68070724,68070189,68068879,68066429,68065786,68064525,68061953,68052859	68121410,68097130,68091089,68089880,68082520,68081848,68081457,68074830,68070857,68070293,68068937,68066516,68065894,68064631,68062034,68054047	Gene ID= ENSG00000110721.11 TPM= 2.34 Transcript Type= NA
chr11	68052859	68121410	68052859	68121410	-	transcript5186.chr11.nnic@CHKA	transcript5186.chr11.nnic	protein_coding	68120828,68097019,68089821,68081727,68081404,68074717,68070724,68070189,68068879,68066429,68065786,68064525,68061953,68052859	68121410,68097130,68089880,68081848,68081457,68074830,68070857,68070293,68068937,68066516,68065894,68064631,68062034,68054047	Gene ID= ENSG00000110721.11 TPM= 4.67 Transcript Type= NA
chr11	68052859	68121410	68052859	68121410	-	transcript5188.chr11.nic@CHKA	transcript5188.chr11.nic	protein_coding	68120828,68097019,68081404,68074717,68070724,68070189,68068879,68066429,68065786,68064525,68061953,68061600,68052859	68121410,68097130,68081457,68074830,68070857,68070293,68068937,68066516,68065894,68064631,68062034,68061830,68054047	Gene ID= ENSG00000110721.11 TPM= 3.5 Transcript Type= NA
chr11	68052859	68083993	68052859	68083993	-	transcript5194.chr11.nic@CHKA	transcript5194.chr11.nic	protein_coding	68081727,68081404,68074717,68070724,68070189,68068879,68066429,68065786,68064525,68061953,68052859	68083993,68081457,68074830,68070857,68070293,68068937,68066516,68065894,68064631,68062034,68054047	Gene ID= ENSG00000110721.11 TPM= 4.67 Transcript Type= NA
chr11	68052859	68121204	68052859	68121204	-	ENST00000265689.8@CHKA	ENST00000265689.8	protein_coding	68120828,68097019,68081404,68074717,68070724,68070189,68068879,68066429,68065786,68064525,68061953,68052859	68121204,68097130,68081457,68074830,68070857,68070293,68068937,68066516,68065894,68064631,68062034,68054047	Gene ID= ENSG00000110721.11 TPM= 2.34 Transcript Type= protein_coding
chr11	68090594	68095427	68090594	68095427	+	transcript5211.chr11.nnic@NA	transcript5211.chr11.nnic	NA	68090594	68095427	Gene ID= novel_gene_chr11_5212 TPM= 95.74 Transcript Type= NA
chr11	68154863	68213415	68154863	68213415	-	ENST00000304363.8@KMT5B	ENST00000304363.8	protein_coding	68213138,68189917,68185781,68180132,68175018,68173804,68171543,68171232,68171015,68166982,68154863	68213415,68190152,68185928,68180200,68175183,68173913,68171709,68171251,68171151,68167178,68159171	Gene ID= ENSG00000110066.14 TPM= 4.67 Transcript Type= protein_coding
chr11	68154863	68213678	68154863	68213678	-	transcript5223.chr11.nic@KMT5B	transcript5223.chr11.nic	protein_coding	68213477,68189917,68185781,68180132,68175018,68173804,68171543,68171232,68171015,68166982,68154863	68213678,68190152,68185928,68180200,68175183,68173913,68171709,68171251,68171151,68167178,68159171	Gene ID= ENSG00000110066.14 TPM= 5.84 Transcript Type= NA
chr11	68165715	68213828	68165715	68213828	-	ENST00000405515.5@KMT5B	ENST00000405515.5	protein_coding	68213477,68189917,68185781,68180132,68175018,68173804,68171543,68171232,68171015,68165715	68213828,68190152,68185928,68180200,68175183,68173913,68171709,68171251,68171151,68167178	Gene ID= ENSG00000110066.14 TPM= 11.09 Transcript Type= protein_coding
chr11	68165715	68213286	68165715	68213286	-	ENST00000401547.6@KMT5B	ENST00000401547.6	protein_coding	68213138,68189917,68185781,68180132,68175018,68173804,68171543,68171232,68171015,68165715	68213286,68190152,68185928,68180200,68175183,68173913,68171709,68171251,68171151,68167178	Gene ID= ENSG00000110066.14 TPM= 4.09 Transcript Type= protein_coding
chr11	68165719	68213595	68165719	68213595	-	ENST00000402789.5@KMT5B	ENST00000402789.5	protein_coding	68213477,68189917,68185781,68180132,68175018,68173804,68171543,68171232,68171015,68166982,68165719	68213595,68190152,68185928,68180200,68175183,68173913,68171709,68171251,68171151,68167178,68165948	Gene ID= ENSG00000110066.14 TPM= 1.17 Transcript Type= protein_coding
chr11	68261335	68271975	68261335	68271975	-	transcript5252.chr11.nic@C11orf24	transcript5252.chr11.nic	protein_coding	68271646,68268054,68263692,68261335	68271975,68268251,68263866,68262918	Gene ID= ENSG00000171067.10 TPM= 3.5 Transcript Type= NA
chr11	68261335	68271962	68261335	68271962	-	ENST00000304271.10@C11orf24	ENST00000304271.10	protein_coding	68271857,68268054,68263692,68261335	68271962,68268251,68263866,68262918	Gene ID= ENSG00000171067.10 TPM= 5.84 Transcript Type= protein_coding
chr11	68312430	68375417	68312430	68375417	+	transcript5265.chr11.nnic@LRP5	transcript5265.chr11.nnic	protein_coding	68312430,68347847,68357650,68363747,68365571,68375231	68312805,68348243,68357847,68363943,68365702,68375417	Gene ID= ENSG00000162337.11 TPM= 5.84 Transcript Type= NA
chr11	68312609	68449275	68312609	68449275	+	ENST00000294304.11@LRP5	ENST00000294304.11	protein_coding	68312609,68347847,68357650,68363747,68365571,68386316,68389881,68403483,68406524,68409914,68411436,68413689,68416328,68423489,68425102,68425978,68429575,68433602,68436889,68438446,68439777,68446436,68448809	68312805,68348243,68357847,68363943,68365702,68386712,68390052,68403699,68406813,68410140,68411620,68414012,68416527,68423697,68425292,68426187,68429700,68433838,68436999,68438682,68439916,68446533,68449275	Gene ID= ENSG00000162337.11 TPM= 86.4 Transcript Type= protein_coding
chr11	68377636	68379092	68377636	68379092	+	transcript5270.chr11.nnic@NA	transcript5270.chr11.nnic	NA	68377636	68379092	Gene ID= novel_gene_chr11_5271 TPM= 2.34 Transcript Type= NA
chr11	68460716	68556562	68460716	68556562	+	transcript5293.chr11.nic@PPP6R3	transcript5293.chr11.nic	protein_coding	68460716,68519501,68537659,68544838,68548067,68551121,68554145	68460827,68519651,68537891,68545024,68548204,68551186,68556562	Gene ID= ENSG00000110075.14 TPM= 3.5 Transcript Type= NA
chr11	68460716	68556562	68460716	68556562	+	transcript5295.chr11.nic@PPP6R3	transcript5295.chr11.nic	protein_coding	68460716,68519501,68537659,68544838,68548067,68551121	68460827,68519651,68537891,68545024,68548204,68556562	Gene ID= ENSG00000110075.14 TPM= 4.67 Transcript Type= NA
chr11	68460755	68614575	68460755	68614575	+	ENST00000524904.5@PPP6R3	ENST00000524904.5	protein_coding	68460755,68519501,68537659,68544838,68548067,68551121,68554145,68558566,68564303,68567014,68569748,68571040,68574109,68575958,68583043,68587945,68590660,68591576,68596097,68600341,68601863,68603342,68609904,68613066	68460827,68519651,68537891,68545024,68548204,68551186,68554257,68558679,68564432,68567166,68569897,68571104,68574224,68576043,68583129,68588024,68590714,68591706,68596218,68600494,68601969,68603492,68610023,68614575	Gene ID= ENSG00000110075.14 TPM= 8.56 Transcript Type= protein_coding
chr11	68460731	68615334	68460731	68615334	+	ENST00000393800.6@PPP6R3	ENST00000393800.6	protein_coding	68460731,68519501,68537659,68544838,68548067,68551121,68554145,68558566,68564303,68567014,68569748,68571040,68574109,68575958,68583043,68587927,68590660,68591576,68596097,68600341,68601863,68603342,68609904,68613066	68460827,68519651,68537891,68545024,68548204,68551186,68554257,68558679,68564432,68567166,68569897,68571104,68574224,68576043,68583129,68588024,68590714,68591706,68596218,68600494,68601969,68603492,68610023,68615334	Gene ID= ENSG00000110075.14 TPM= 17.32 Transcript Type= protein_coding
chr11	68497215	68500634	68497215	68500634	-	transcript5298.chr11.nnic@NA	transcript5298.chr11.nnic	NA	68497215	68500634	Gene ID= novel_gene_chr11_5299 TPM= 2.34 Transcript Type= NA
chr11	68542391	68546402	68542391	68546402	-	transcript5300.chr11.nnic@NA	transcript5300.chr11.nnic	NA	68542391	68546402	Gene ID= novel_gene_chr11_5301 TPM= 10.51 Transcript Type= NA
chr11	68560896	68563530	68560896	68563530	-	transcript5302.chr11.nnic@NA	transcript5302.chr11.nnic	NA	68560896	68563530	Gene ID= novel_gene_chr11_5303 TPM= 4.67 Transcript Type= NA
chr11	68610301	68615332	68610301	68615332	+	transcript5296.chr11.nnic@NA	transcript5296.chr11.nnic	NA	68610301	68615332	Gene ID= novel_gene_chr11_5297 TPM= 4.47 Transcript Type= NA
chr11	68754886	68841973	68754886	68841973	-	transcript5305.chr11.nnic@CPT1A	transcript5305.chr11.nnic	protein_coding	68841775,68815334,68812437,68807467,68804000,68799218,68796856,68794804,68793315,68784815,68781771,68780640,68775316,68773265,68762627,68761535,68760225,68759569,68756098,68754886	68841973,68815487,68812576,68807638,68804101,68799355,68796933,68794911,68793402,68785010,68781959,68780745,68775432,68773429,68762761,68761687,68760338,68759661,68757730,68755460	Gene ID= ENSG00000110090.12 TPM= 7.79 Transcript Type= NA
chr11	68754889	68841879	68754889	68841879	-	transcript5308.chr11.nnic@CPT1A	transcript5308.chr11.nnic	protein_coding	68841775,68815334,68812437,68807467,68804000,68799218,68796856,68794804,68793315,68784815,68781771,68780640,68775316,68773265,68762627,68761535,68760225,68759569,68756462,68754889	68841879,68815487,68812576,68807638,68804101,68799355,68796933,68794911,68793402,68785010,68781959,68780745,68775432,68773429,68762761,68761687,68760338,68759661,68757730,68755455	Gene ID= ENSG00000110090.12 TPM= 3.12 Transcript Type= NA
chr11	68754889	68841916	68754889	68841916	-	ENST00000265641.9@CPT1A	ENST00000265641.9	protein_coding	68841775,68815334,68812437,68807467,68804000,68799218,68796856,68794804,68793315,68784815,68781771,68780640,68775316,68773265,68762627,68761535,68760225,68759569,68754889	68841916,68815487,68812576,68807638,68804101,68799355,68796933,68794911,68793402,68785010,68781959,68780745,68775432,68773429,68762761,68761687,68760338,68759661,68757730	Gene ID= ENSG00000110090.12 TPM= 14.79 Transcript Type= protein_coding
chr11	68813562	68814443	68813562	68814443	+	transcript5330.chr11.nnic@NA	transcript5330.chr11.nnic	NA	68813562	68814443	Gene ID= novel_gene_chr11_5331 TPM= 4.67 Transcript Type= NA
chr11	68891276	68903820	68891276	68903820	-	ENST00000362034.6@MRPL21	ENST00000362034.6	protein_coding	68903723,68900548,68897927,68896515,68893403,68892890,68891276	68903820,68900605,68898012,68896678,68893455,68892993,68891395	Gene ID= ENSG00000197345.12 TPM= 31.53 Transcript Type= protein_coding
chr11	68891276	68903786	68891276	68903786	-	ENST00000450904.6@MRPL21	ENST00000450904.6	protein_coding	68903723,68900535,68897927,68896515,68893403,68892890,68891276	68903786,68900605,68898012,68896678,68893455,68892993,68891395	Gene ID= ENSG00000197345.12 TPM= 3.5 Transcript Type= protein_coding
chr11	68891283	68903827	68891283	68903827	-	ENST00000541279.1@MRPL21	ENST00000541279.1	protein_coding	68903723,68900548,68897927,68896515,68893322,68892890,68891283	68903827,68900605,68898012,68896678,68893455,68892993,68891395	Gene ID= ENSG00000197345.12 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr11	68903877	68940601	68903877	68940601	+	transcript5341.chr11.nnic@IGHMBP2	transcript5341.chr11.nnic	protein_coding	68903877,68906069,68908145,68908534,68911440,68914823,68917736,68929183,68930323,68933299,68933795,68934464,68935331,68936237,68938182,68939534	68904038,68906238,68908337,68908631,68911603,68915023,68917883,68929357,68930434,68933481,68933913,68934558,68935422,68937091,68938354,68940601	Gene ID= ENSG00000132740.8 TPM= 11.68 Transcript Type= NA
chr11	68903842	68940599	68903842	68940599	+	ENST00000255078.7@IGHMBP2	ENST00000255078.7	protein_coding	68903842,68906069,68908145,68908534,68911440,68914823,68917736,68929183,68933299,68933795,68934464,68935299,68936237,68938182,68939534	68904038,68906238,68908337,68908631,68911603,68915023,68917883,68929357,68933481,68933913,68934558,68935422,68937091,68938354,68940599	Gene ID= ENSG00000132740.8 TPM= 19.85 Transcript Type= protein_coding
chr11	69004398	69013409	69004398	69013409	-	ENST00000309099.6@MRGPRF	ENST00000309099.6	protein_coding	69013083,69009854,69004398	69013409,69009957,69006261	Gene ID= ENSG00000172935.8 TPM= 30.36 Transcript Type= protein_coding
chr11	69048897	69088524	69048897	69088524	+	ENST00000294309.7@TPCN2	ENST00000294309.7	protein_coding	69048897,69054033,69054721,69055175,69057578,69062884,69063895,69067503,69070430,69071356,69071923,69072627,69072915,69078482,69078734,69078892,69079834,69081400,69083945,69085210,69085671,69085848,69086523,69087112,69087875	69049106,69054097,69054797,69055352,69057694,69062990,69063967,69067605,69070495,69071420,69072023,69072708,69073001,69078601,69078793,69079020,69079883,69081499,69084016,69085286,69085752,69085930,69086604,69087206,69088524	Gene ID= ENSG00000162341.16 TPM= 8.17 Transcript Type= protein_coding
chr11	69088311	69091529	69088311	69091529	+	transcript5371.chr11.nnic@NA	transcript5371.chr11.nnic	NA	69088311	69091529	Gene ID= novel_gene_chr11_5372 TPM= 2.34 Transcript Type= NA
chr11	69641087	69654474	69641087	69654474	+	ENST00000227507.2@CCND1	ENST00000227507.2	protein_coding	69641087,69643031,69643832,69647994,69651118	69641511,69643246,69643991,69648142,69654474	Gene ID= ENSG00000110092.3 TPM= 444.85 Transcript Type= protein_coding
chr11	69665566	69675323	69665566	69675323	-	ENST00000536870.5@ORAOV1	ENST00000536870.5	protein_coding	69675190,69667895,69665566	69675323,69668012,69667587	Gene ID= ENSG00000149716.12 TPM= 3.5 Transcript Type= protein_coding
chr11	69671378	69675416	69671378	69675416	-	ENST00000542341.1@ORAOV1	ENST00000542341.1	protein_coding	69675190,69673216,69671378	69675416,69673321,69671819	Gene ID= ENSG00000149716.12 TPM= 1.17 Transcript Type= protein_coding
chr11	69665563	69675347	69665563	69675347	-	ENST00000279147.8@ORAOV1	ENST00000279147.8	protein_coding	69675190,69673216,69671749,69667895,69665563	69675347,69673321,69671819,69668012,69667587	Gene ID= ENSG00000149716.12 TPM= 8.17 Transcript Type= protein_coding
chr11	69673691	69675344	69673691	69675344	-	transcript5397.chr11.nnic@NA	transcript5397.chr11.nnic	NA	69673691	69675344	Gene ID= novel_gene_chr11_5398 TPM= 5.84 Transcript Type= NA
chr11	69985713	70189528	69985713	70189528	+	transcript5404.chr11.nnic@ANO1	transcript5404.chr11.nnic	protein_coding	69985713,70078542,70087752,70103066,70103999,70105734,70108353,70111707,70116458,70124350,70126061,70131919,70149710,70152450,70153057,70155911,70156947,70161161,70161622,70163283,70165470,70167242,70170887,70180004,70182502,70185590,70187738	69986166,70078714,70088084,70103164,70104150,70105788,70108404,70111762,70116499,70124414,70126195,70132079,70149792,70152461,70153128,70155988,70157021,70161362,70161733,70163340,70165570,70167387,70171039,70180056,70182686,70185695,70189528	Gene ID= ENSG00000131620.17 TPM= 17.51 Transcript Type= NA
chr11	69985713	70189528	69985713	70189528	+	transcript5406.chr11.nnic@ANO1	transcript5406.chr11.nnic	protein_coding	69985713,70078542,70087752,70103066,70103999,70105734,70108353,70111707,70116458,70124350,70126061,70131919,70149710,70152450,70153057,70156947,70161161,70161622,70163283,70165470,70167242,70170887,70180004,70182502,70185590,70187738	69986166,70078714,70088084,70103164,70104150,70105788,70108404,70111762,70116499,70124414,70126195,70132079,70149792,70152461,70153128,70157021,70161362,70161733,70163340,70165570,70167387,70171039,70180056,70182686,70185695,70189528	Gene ID= ENSG00000131620.17 TPM= 5.84 Transcript Type= NA
chr11	70078302	70189528	70078302	70189528	+	ENST00000355303.9@ANO1	ENST00000355303.9	protein_coding	70078302,70087752,70103066,70103999,70105734,70108353,70111707,70116458,70124350,70126061,70131919,70149710,70152450,70153057,70155911,70156947,70161161,70161622,70163283,70165470,70167242,70170887,70180004,70182502,70185590,70187738	70078714,70088084,70103164,70104150,70105788,70108404,70111762,70116499,70124414,70126195,70132079,70149792,70152461,70153128,70155988,70157021,70161362,70161733,70163340,70165570,70167387,70171039,70180056,70182686,70185695,70189528	Gene ID= ENSG00000131620.17 TPM= 6.22 Transcript Type= protein_coding
chr11	70092551	70095383	70092551	70095383	+	transcript5412.chr11.nnic@NA	transcript5412.chr11.nnic	NA	70092551	70095383	Gene ID= novel_gene_chr11_5413 TPM= 2.34 Transcript Type= NA
chr11	70203163	70207390	70203163	70207390	+	ENST00000301838.4@FADD	ENST00000301838.4	protein_coding	70203163,70206133	70203745,70207390	Gene ID= ENSG00000168040.4 TPM= 71.22 Transcript Type= protein_coding
chr11	70203306	70204836	70203306	70204836	+	transcript5418.chr11.nnic@NA	transcript5418.chr11.nnic	NA	70203306	70204836	Gene ID= novel_gene_chr11_5419 TPM= 2.34 Transcript Type= NA
chr11	70270682	70384394	70270682	70384394	+	transcript5421.chr11.nic@PPFIA1	transcript5421.chr11.nic	protein_coding	70270682,70272173,70324402,70324847,70325500,70326262,70326597,70330173,70331960,70333470,70335563,70337365,70338374,70339171,70343669,70348189,70349923,70354301,70355639,70356161,70362095,70362288,70372215,70372477,70374918,70376532,70378030,70382088,70383003	70270914,70272436,70324503,70325011,70325574,70326363,70326818,70330319,70332094,70333553,70335694,70337427,70338453,70339306,70343892,70348420,70350039,70354452,70355811,70356254,70362176,70362488,70372390,70372574,70375093,70376600,70378195,70382158,70384394	Gene ID= ENSG00000131626.16 TPM= 4.87 Transcript Type= NA
chr11	70270682	70384392	70270682	70384392	+	transcript5427.chr11.nic@PPFIA1	transcript5427.chr11.nic	protein_coding	70270682,70272173,70324402,70324847,70325500,70326262,70326597,70330173,70331960,70333470,70335563,70337365,70338374,70339171,70343669,70348189,70354301,70355639,70356161,70362095,70362288,70372215,70372477,70374918,70376532,70378030,70383003	70270914,70272436,70324503,70325011,70325574,70326363,70326818,70330319,70332094,70333553,70335694,70337427,70338453,70339306,70343892,70348420,70354452,70355811,70356254,70362176,70362488,70372390,70372574,70375093,70376600,70378195,70384392	Gene ID= ENSG00000131626.16 TPM= 5.84 Transcript Type= NA
chr11	70270700	70384400	70270700	70384400	+	ENST00000253925.11@PPFIA1	ENST00000253925.11	protein_coding	70270700,70272173,70324402,70324847,70325500,70326262,70326597,70330173,70331960,70333470,70335563,70337365,70338374,70339171,70343669,70348189,70354301,70355639,70356161,70362095,70362288,70372215,70372477,70374918,70376532,70378030,70382088,70383003	70270914,70272436,70324503,70325011,70325574,70326363,70326818,70330319,70332094,70333553,70335694,70337427,70338453,70339306,70343892,70348420,70354452,70355811,70356254,70362176,70362488,70372390,70372574,70375093,70376600,70378195,70382158,70384400	Gene ID= ENSG00000131626.16 TPM= 30.94 Transcript Type= protein_coding
chr11	70398512	70436575	70398512	70436575	+	transcript5440.chr11.nnic@CTTN	transcript5440.chr11.nnic	protein_coding	70398512,70405265,70407298,70407518,70409831,70414542,70415663,70417013,70419746,70420400,70421470,70422940,70425332,70429051,70431191,70433101,70433647,70435026,70435466,70436282	70398614,70405361,70407384,70407591,70409960,70414652,70415717,70417123,70419856,70420510,70421580,70422995,70425401,70429199,70431280,70433278,70433718,70435119,70435571,70436575	Gene ID= ENSG00000085733.15 TPM= 5.25 Transcript Type= NA
chr11	70398506	70436575	70398506	70436575	+	ENST00000301843.12@CTTN	ENST00000301843.12	protein_coding	70398506,70405265,70407298,70407518,70409831,70414542,70415663,70417013,70419746,70420400,70421470,70422940,70425332,70429051,70431191,70433101,70433647,70435026	70398614,70405361,70407384,70407591,70409960,70414652,70415717,70417123,70419856,70420510,70421580,70422995,70425401,70429199,70431280,70433278,70433718,70436575	Gene ID= ENSG00000085733.15 TPM= 91.66 Transcript Type= protein_coding
chr11	70398404	70436584	70398404	70436584	+	ENST00000346329.7@CTTN	ENST00000346329.7	protein_coding	70398404,70405265,70407298,70407518,70409831,70414542,70415663,70417013,70419746,70420400,70422940,70425332,70429051,70431191,70433101,70433647,70435026	70398614,70405361,70407384,70407591,70409960,70414652,70415717,70417123,70419856,70420510,70422995,70425401,70429199,70431280,70433278,70433718,70436584	Gene ID= ENSG00000085733.15 TPM= 52.54 Transcript Type= protein_coding
chr11	70398512	70406536	70398512	70406536	+	transcript5452.chr11.nic@CTTN	transcript5452.chr11.nic	protein_coding	70398512,70405265	70398614,70406536	Gene ID= ENSG00000085733.15 TPM= 2.34 Transcript Type= NA
chr11	70469435	70485527	70469435	70485527	-	transcript5459.chr11.nic@SHANK2	transcript5459.chr11.nic	protein_coding	70485314,70469435	70485527,70473439	Gene ID= ENSG00000162105.17 TPM= 15.18 Transcript Type= NA
chr11	70703997	70707395	70703997	70707395	+	transcript5460.chr11.nnic@NA	transcript5460.chr11.nnic	NA	70703997	70707395	Gene ID= novel_gene_chr11_5461 TPM= 5.84 Transcript Type= NA
chr11	71434414	71448435	71434414	71448435	-	ENST00000355527.7@DHCR7	ENST00000355527.7	protein_coding	71448290,71447610,71444855,71443993,71442263,71441227,71438879,71437812,71434414	71448435,71447734,71444958,71444215,71442353,71441440,71439083,71437943,71435839	Gene ID= ENSG00000172893.15 TPM= 179.72 Transcript Type= protein_coding
chr11	71434414	71448393	71434414	71448393	-	ENST00000407721.6@DHCR7	ENST00000407721.6	protein_coding	71448313,71447610,71444855,71443993,71442263,71441227,71438879,71437812,71434414	71448393,71447734,71444958,71444215,71442353,71441440,71439083,71437943,71435839	Gene ID= ENSG00000172893.15 TPM= 20.92 Transcript Type= protein_coding
chr11	71448674	71452157	71448674	71452157	+	ENST00000529369.1@AP002387.1	ENST00000529369.1	antisense_RNA	71448674,71451690	71448885,71452157	Gene ID= ENSG00000254682.1 TPM= 2.34 Transcript Type= antisense_RNA
chr11	71453184	71505874	71453184	71505874	+	transcript5480.chr11.nnic@NADSYN1	transcript5480.chr11.nnic	protein_coding	71453184,71455110,71458428,71463432,71464053,71472449,71473278,71473569,71474395,71478395,71480755,71481356,71481923,71482849,71484312,71485542,71490845,71491834,71497483,71498352,71501302,71505511	71453381,71455170,71458544,71463485,71464142,71472500,71473366,71473686,71474526,71478469,71480879,71481404,71482025,71483017,71484447,71485648,71490976,71491903,71497611,71498528,71501426,71505874	Gene ID= ENSG00000172890.11 TPM= 5.25 Transcript Type= NA
chr11	71453109	71501816	71453109	71501816	+	ENST00000319023.6@NADSYN1	ENST00000319023.6	protein_coding	71453109,71455110,71458428,71463432,71464053,71472449,71473278,71473569,71474395,71478395,71480755,71481356,71481923,71482849,71484312,71485542,71490845,71491834,71497483,71498352,71501302	71453381,71455170,71458544,71463485,71464142,71472500,71473366,71473686,71474526,71478469,71480879,71481404,71482025,71483017,71484447,71485648,71490976,71491903,71497611,71498528,71501816	Gene ID= ENSG00000172890.11 TPM= 48.46 Transcript Type= protein_coding
chr11	71453231	71464508	71453231	71464508	+	ENST00000524949.5@NADSYN1	ENST00000524949.5	protein_coding	71453231,71455110,71458428,71463432,71464053	71453381,71455170,71458544,71463485,71464508	Gene ID= ENSG00000172890.11 TPM= 2.34 Transcript Type= retained_intron
chr11	71479294	71501539	71479294	71501539	+	ENST00000530055.5@NADSYN1	ENST00000530055.5	protein_coding	71479294,71480755,71481356,71481923,71482849,71484312,71485542,71490845,71491834,71497483,71498352,71501302	71480274,71480879,71481404,71482025,71483017,71484447,71485648,71490976,71491903,71497611,71498528,71501539	Gene ID= ENSG00000172890.11 TPM= 9.34 Transcript Type= protein_coding
chr11	71745879	71747051	71745879	71747051	+	transcript5499.chr11.nnic@NA	transcript5499.chr11.nnic	NA	71745879	71747051	Gene ID= novel_gene_chr11_5500 TPM= 2.34 Transcript Type= NA
chr11	71787522	71801234	71787522	71801234	+	transcript5505.chr11.nic@FAM86C1	transcript5505.chr11.nic	protein_coding	71787522,71789783,71791736,71793380,71796017,71799561	71787632,71789845,71791819,71793481,71796166,71801234	Gene ID= ENSG00000158483.15 TPM= 2.34 Transcript Type= NA
chr11	71787514	71801236	71787514	71801236	+	ENST00000359244.8@FAM86C1	ENST00000359244.8	protein_coding	71787514,71789783,71793380,71796017,71799561	71787632,71789845,71793481,71796166,71801236	Gene ID= ENSG00000158483.15 TPM= 1.17 Transcript Type= protein_coding
chr11	71787510	71801234	71787510	71801234	+	ENST00000346333.10@FAM86C1	ENST00000346333.10	protein_coding	71787510,71789783,71796017,71799561	71787632,71789845,71796166,71801234	Gene ID= ENSG00000158483.15 TPM= 1.17 Transcript Type= protein_coding
chr11	71929033	71997597	71929033	71997597	+	transcript5514.chr11.nic@RNF121	transcript5514.chr11.nic	protein_coding	71929033,71957227,71960750,71962152,71982761,71987004,71990597,71994719,71995450,71996195	71929124,71957264,71960891,71962289,71982915,71987111,71990717,71994852,71995551,71997597	Gene ID= ENSG00000137522.17 TPM= 3.12 Transcript Type= NA
chr11	71928701	71997595	71928701	71997595	+	ENST00000361756.7@RNF121	ENST00000361756.7	protein_coding	71928701,71957227,71960750,71982761,71987004,71990597,71994719,71995450,71996195	71929124,71957264,71960891,71982915,71987111,71990717,71994852,71995551,71997595	Gene ID= ENSG00000137522.17 TPM= 15.96 Transcript Type= protein_coding
chr11	71929082	71997591	71929082	71997591	+	ENST00000530137.1@RNF121	ENST00000530137.1	protein_coding	71929082,71960750,71982761,71987004,71990597,71994719,71995450,71996195	71929124,71960891,71982915,71987111,71990717,71994852,71995551,71997591	Gene ID= ENSG00000137522.17 TPM= 1.95 Transcript Type= protein_coding
chr11	71998541	72002527	71998541	72002527	+	ENST00000393703.8@IL18BP	ENST00000393703.8	protein_coding	71998541,71999927,72000351,72001201,72001405,72001784	71999019,72000012,72000557,72001324,72001552,72002527	Gene ID= ENSG00000137496.17 TPM= 5.84 Transcript Type= protein_coding
chr11	71998892	72002527	71998892	72002527	+	ENST00000393705.8@IL18BP	ENST00000393705.8	protein_coding	71998892,71999259,71999927,72000351,72001201,72001405,72001784	71999019,71999370,72000012,72000557,72001324,72001552,72002527	Gene ID= ENSG00000137496.17 TPM= 2.34 Transcript Type= protein_coding
chr11	72002864	72041137	72002864	72041137	-	transcript5528.chr11.nic@NUMA1	transcript5528.chr11.nic	protein_coding	72040959,72035902,72029205,72024274,72023065,72022339,72021204,72019494,72018823,72018396,72018183,72017687,72016408,72012895,72012401,72010786,72009268,72008967,72008688,72008092,72007189,72006035,72005233,72004640,72004225,72003887,72002864	72041137,72035975,72029290,72024353,72023147,72022419,72021291,72019617,72018980,72018513,72018300,72017827,72016530,72016260,72012442,72010854,72009387,72009185,72008845,72008145,72007435,72006263,72005369,72004816,72004341,72004099,72003538	Gene ID= ENSG00000137497.17 TPM= 9.54 Transcript Type= NA
chr11	72002864	72041137	72002864	72041137	-	transcript5531.chr11.nic@NUMA1	transcript5531.chr11.nic	protein_coding	72040959,72035902,72029205,72024274,72023065,72022339,72021204,72019494,72018823,72018396,72018183,72017687,72016408,72012895,72012401,72010786,72009268,72008967,72008688,72007189,72006035,72005233,72004640,72004225,72003887,72002864	72041137,72035975,72029290,72024353,72023147,72022419,72021291,72019617,72018980,72018513,72018300,72017827,72016530,72016260,72012442,72010854,72009387,72009185,72008845,72007435,72006263,72005369,72004816,72004341,72004099,72003538	Gene ID= ENSG00000137497.17 TPM= 29.55 Transcript Type= NA
chr11	72002864	72041137	72002864	72041137	-	transcript5537.chr11.nic@NUMA1	transcript5537.chr11.nic	protein_coding	72040959,72035902,72029205,72024274,72023065,72022339,72021204,72019494,72018823,72018396,72018183,72017687,72016408,72012895,72010786,72009268,72008967,72008688,72007189,72006035,72005233,72004640,72004225,72003887,72002864	72041137,72035975,72029290,72024353,72023147,72022419,72021291,72019617,72018980,72018513,72018300,72017827,72016530,72016260,72010854,72009387,72009185,72008845,72007435,72006263,72005369,72004816,72004341,72004099,72003538	Gene ID= ENSG00000137497.17 TPM= 20.21 Transcript Type= NA
chr11	72002864	72080687	72002864	72080687	-	ENST00000393695.7@NUMA1	ENST00000393695.7	protein_coding	72080458,72069842,72035902,72029205,72024274,72023065,72022339,72021204,72019494,72018823,72018396,72018183,72017687,72016408,72012895,72012401,72010786,72009268,72008967,72008688,72007189,72006035,72005233,72004640,72004225,72003887,72002864	72080687,72069911,72035975,72029290,72024353,72023147,72022419,72021291,72019617,72018980,72018513,72018300,72017827,72016530,72016260,72012442,72010854,72009387,72009185,72008845,72007435,72006263,72005369,72004816,72004341,72004099,72003538	Gene ID= ENSG00000137497.17 TPM= 56.79 Transcript Type= protein_coding
chr11	72005617	72008205	72005617	72008205	+	transcript5560.chr11.nnic@NA	transcript5560.chr11.nnic	NA	72005617	72008205	Gene ID= novel_gene_chr11_5561 TPM= 3.5 Transcript Type= NA
chr11	72023840	72028478	72023840	72028478	+	transcript5558.chr11.nnic@NA	transcript5558.chr11.nnic	NA	72023840,72025511	72024838,72028478	Gene ID= novel_gene_chr11_5559 TPM= 10.51 Transcript Type= NA
chr11	72097292	72103387	72097292	72103387	-	ENST00000278671.9@LAMTOR1	ENST00000278671.9	protein_coding	72103183,72099111,72098781,72098289,72097292	72103387,72099256,72098858,72098415,72097914	Gene ID= ENSG00000149357.9 TPM= 210.17 Transcript Type= protein_coding
chr11	72109589	72112279	72109589	72112279	-	ENST00000542531.5@ANAPC15	ENST00000542531.5	protein_coding	72112216,72111412,72111157,72110544,72110088,72109589	72112279,72111496,72111281,72110603,72110225,72109928	Gene ID= ENSG00000110200.8 TPM= 1.17 Transcript Type= protein_coding
chr11	72109587	72112780	72109587	72112780	-	ENST00000227618.8@ANAPC15	ENST00000227618.8	protein_coding	72112650,72111412,72111157,72110544,72110088,72109587	72112780,72111496,72111286,72110603,72110225,72109928	Gene ID= ENSG00000110200.8 TPM= 10.51 Transcript Type= protein_coding
chr11	72109589	72112774	72109589	72112774	-	ENST00000535234.5@ANAPC15	ENST00000535234.5	protein_coding	72112650,72111442,72111157,72110544,72110088,72109589	72112774,72111496,72111286,72110603,72110225,72109928	Gene ID= ENSG00000110200.8 TPM= 3.5 Transcript Type= protein_coding
chr11	72109590	72112769	72109590	72112769	-	ENST00000538393.5@ANAPC15	ENST00000538393.5	protein_coding	72112650,72111412,72111157,72110544,72110088,72109590	72112769,72111496,72111281,72110603,72110225,72109928	Gene ID= ENSG00000110200.8 TPM= 4.67 Transcript Type= protein_coding
chr11	72135752	72139890	72135752	72139890	+	ENST00000611028.2@FOLR3	ENST00000611028.2	protein_coding	72135752,72135947,72138961,72139347,72139587	72135768,72136120,72139149,72139482,72139890	Gene ID= ENSG00000110203.8 TPM= 11.68 Transcript Type= protein_coding
chr11	72189558	72196323	72189558	72196323	+	ENST00000312293.9@FOLR1	ENST00000312293.9	protein_coding	72189558,72192166,72195271,72195612,72195897	72189759,72192341,72195459,72195747,72196323	Gene ID= ENSG00000110195.12 TPM= 23.64 Transcript Type= protein_coding
chr11	72192076	72196301	72192076	72196301	+	ENST00000393676.4@FOLR1	ENST00000393676.4	protein_coding	72192076,72195271,72195612,72195897	72192341,72195459,72195747,72196301	Gene ID= ENSG00000110195.12 TPM= 142.35 Transcript Type= protein_coding
chr11	72189668	72196298	72189668	72196298	+	ENST00000393681.6@FOLR1	ENST00000393681.6	protein_coding	72189668,72190576,72192166,72195271,72195612,72195897	72189759,72190641,72192341,72195459,72195747,72196298	Gene ID= ENSG00000110195.12 TPM= 26.18 Transcript Type= protein_coding
chr11	72216763	72221945	72216763	72221945	+	ENST00000298223.10@FOLR2	ENST00000298223.10	protein_coding	72216763,72218561,72220870,72221176,72221470	72216925,72218734,72221058,72221311,72221945	Gene ID= ENSG00000165457.13 TPM= 32.69 Transcript Type= protein_coding
chr11	72216781	72221950	72216781	72221950	+	ENST00000454954.6@FOLR2	ENST00000454954.6	protein_coding	72216781,72220870,72221176,72221470	72216925,72221058,72221311,72221950	Gene ID= ENSG00000165457.13 TPM= 2.34 Transcript Type= protein_coding
chr11	72223859	72239105	72223859	72239105	+	transcript5587.chr11.nic@INPPL1	transcript5587.chr11.nic	protein_coding	72223859,72224780,72228190,72228348,72228727,72229090,72229465,72229663,72229924,72230121,72230362,72230796,72230993,72231498,72232240,72232626,72232875,72233075,72233441,72233655,72234281,72234527,72235116,72235296,72235675,72235846,72237124,72238042,72238263	72223960,72225166,72228253,72228498,72228847,72229230,72229558,72229752,72230019,72230271,72230468,72230898,72231189,72231615,72232336,72232764,72232974,72233163,72233522,72233744,72234394,72234615,72235203,72235451,72235753,72235986,72237796,72238175,72239105	Gene ID= ENSG00000165458.13 TPM= 31.33 Transcript Type= NA
chr11	72223865	72239105	72223865	72239105	+	transcript5588.chr11.nnic@INPPL1	transcript5588.chr11.nnic	protein_coding	72223865,72224780,72228190,72228348,72228727,72229090,72229465,72229663,72229924,72230121,72230362,72230796,72230993,72231498,72232240,72232626,72232875,72233075,72233441,72233655,72234281,72234527,72235116,72235296,72235675,72235846,72237124,72238042,72238263	72224184,72225166,72228253,72228498,72228847,72229230,72229558,72229752,72230019,72230271,72230468,72230898,72231189,72231615,72232336,72232764,72232974,72233163,72233522,72233744,72234394,72234615,72235203,72235451,72235753,72235986,72237796,72238175,72239105	Gene ID= ENSG00000165458.13 TPM= 27.82 Transcript Type= NA
chr11	72226178	72230858	72226178	72230858	+	transcript5603.chr11.nic@INPPL1	transcript5603.chr11.nic	protein_coding	72226178,72228348	72228253,72230858	Gene ID= ENSG00000165458.13 TPM= 15.18 Transcript Type= NA
chr11	72224781	72239105	72224781	72239105	+	ENST00000298229.6@INPPL1	ENST00000298229.6	protein_coding	72224781,72228190,72228348,72228727,72229090,72229465,72229663,72229924,72230121,72230362,72230796,72230993,72231498,72232240,72232626,72232875,72233075,72233441,72233655,72234281,72234527,72235116,72235296,72235675,72235846,72237124,72238042,72238263	72225166,72228253,72228498,72228847,72229230,72229558,72229752,72230019,72230271,72230468,72230898,72231189,72231615,72232336,72232764,72232974,72233163,72233522,72233744,72234394,72234615,72235203,72235451,72235753,72235986,72237796,72238175,72239105	Gene ID= ENSG00000165458.13 TPM= 24.32 Transcript Type= protein_coding
chr11	72292446	72434597	72292446	72434597	-	ENST00000538039.5@CLPB	ENST00000538039.5	protein_coding	72434072,72430312,72402966,72380281,72358880,72329707,72317106,72308527,72307199,72302304,72301803,72295492,72294620,72294325,72294022,72292446	72434597,72430363,72403052,72380384,72359008,72329804,72317220,72308604,72307254,72302348,72301964,72295648,72294693,72294444,72294126,72293615	Gene ID= ENSG00000162129.12 TPM= 31.53 Transcript Type= protein_coding
chr11	72576142	72642460	72576142	72642460	-	ENST00000444035.6@PDE2A	ENST00000444035.6	protein_coding	72642254,72631078,72608662,72605138,72597510,72596593,72591297,72590427,72590192,72589907,72589751,72589175,72588784,72586070,72585554,72585371,72584872,72584551,72584201,72583438,72582444,72581877,72581357,72580886,72580577,72579534,72579284,72578897,72578476,72578233,72576142	72642460,72631139,72608751,72605226,72597619,72596648,72591356,72590580,72590244,72589981,72589792,72589240,72588914,72586181,72585593,72585434,72584944,72584728,72584313,72583515,72582566,72581947,72581479,72580973,72580624,72579608,72579383,72579009,72578514,72578339,72577594	Gene ID= ENSG00000186642.15 TPM= 50.21 Transcript Type= protein_coding
chr11	72685075	72752462	72685075	72752462	-	transcript5625.chr11.nic@ARAP1	transcript5625.chr11.nic	protein_coding	72752328,72732515,72726620,72714152,72713176,72712438,72712196,72711430,72711021,72710385,72709870,72707175,72705805,72704152,72702905,72701649,72699417,72699005,72697911,72697598,72697323,72696983,72696549,72695718,72695542,72695387,72694980,72693692,72693325,72688455,72687688,72687439,72686042,72685075	72752462,72732597,72727172,72714321,72713243,72712568,72712339,72711499,72711141,72710587,72709976,72707374,72705890,72704334,72703079,72701783,72699552,72699107,72698106,72697649,72697486,72697195,72696654,72695865,72695628,72695455,72695097,72693805,72693470,72688537,72687738,72687502,72686191,72685681	Gene ID= ENSG00000186635.14 TPM= 79.96 Transcript Type= NA
chr11	72685075	72722358	72685075	72722358	-	ENST00000334211.12@ARAP1	ENST00000334211.12	protein_coding	72721850,72714152,72713176,72712438,72712196,72711430,72711021,72710385,72709870,72707175,72705805,72704152,72702905,72701649,72699417,72699005,72697911,72697598,72697323,72696983,72696549,72695718,72695542,72695387,72694980,72693692,72693325,72692753,72688455,72687688,72687439,72686042,72685075	72722358,72714321,72713243,72712568,72712339,72711499,72711141,72710587,72709976,72707374,72705890,72704334,72703079,72701783,72699552,72699107,72698106,72697649,72697486,72697195,72696654,72695865,72695628,72695455,72695097,72693805,72693470,72692785,72688537,72687738,72687502,72686191,72685681	Gene ID= ENSG00000186635.14 TPM= 19.27 Transcript Type= protein_coding
chr11	72685075	72752403	72685075	72752403	-	ENST00000393609.7@ARAP1	ENST00000393609.7	protein_coding	72752328,72732515,72726620,72714152,72713176,72712438,72712196,72711430,72711021,72710385,72709870,72707175,72705805,72704152,72702905,72701649,72699417,72699005,72697911,72697598,72697323,72696983,72696549,72695718,72695542,72695387,72694980,72693692,72693325,72692753,72688455,72687688,72687439,72686042,72685075	72752403,72732597,72727172,72714321,72713243,72712568,72712339,72711499,72711141,72710587,72709976,72707374,72705890,72704334,72703079,72701783,72699552,72699107,72698106,72697649,72697486,72697195,72696654,72695865,72695628,72695455,72695097,72693805,72693470,72692785,72688537,72687738,72687502,72686191,72685681	Gene ID= ENSG00000186635.14 TPM= 13.89 Transcript Type= protein_coding
chr11	72754729	72781737	72754729	72781737	-	transcript5678.chr11.nnic@STARD10	transcript5678.chr11.nnic	protein_coding	72781579,72780975,72759234,72758530,72757767,72755701,72754729	72781737,72781294,72759381,72758633,72757884,72755753,72755142	Gene ID= ENSG00000214530.8 TPM= 35.23 Transcript Type= NA
chr11	72754730	72793681	72754730	72793681	-	ENST00000334805.10@STARD10	ENST00000334805.10	protein_coding	72792875,72780975,72759234,72758530,72757767,72755701,72754730	72793681,72781294,72759381,72758633,72757884,72755753,72755142	Gene ID= ENSG00000214530.8 TPM= 12.26 Transcript Type= protein_coding
chr11	72754729	72781930	72754729	72781930	-	transcript5682.chr11.nic@STARD10	transcript5682.chr11.nic	protein_coding	72781664,72781113,72759234,72758530,72757767,72755701,72754729	72781930,72781294,72759381,72758633,72757884,72755753,72755142	Gene ID= ENSG00000214530.8 TPM= 17.13 Transcript Type= NA
chr11	72754729	72781930	72754729	72781930	-	transcript5683.chr11.nic@STARD10	transcript5683.chr11.nic	protein_coding	72781664,72780975,72759234,72758530,72755701,72754729	72781930,72781294,72759381,72758633,72755753,72755142	Gene ID= ENSG00000214530.8 TPM= 10.12 Transcript Type= NA
chr11	72814381	72829598	72814381	72829598	+	transcript5706.chr11.nic@ATG16L2	transcript5706.chr11.nic	protein_coding	72814381,72816728,72817756,72821668,72822044,72822478,72822848,72823766,72824060,72824734,72825302,72826173,72826518,72826703,72827188,72828359,72828729,72828883,72829303	72814563,72816827,72817855,72821741,72822295,72822543,72822961,72823797,72824122,72824842,72825407,72826243,72826589,72826823,72827293,72828508,72828776,72828984,72829598	Gene ID= ENSG00000168010.10 TPM= 4.76 Transcript Type= NA
chr11	72814308	72829635	72814308	72829635	+	ENST00000321297.9@ATG16L2	ENST00000321297.9	protein_coding	72814308,72816728,72817756,72821668,72822044,72822478,72822848,72824060,72824734,72825302,72826173,72826518,72826703,72827188,72828359,72828729,72828883,72829303	72814563,72816827,72817855,72821741,72822295,72822543,72822961,72824122,72824842,72825407,72826243,72826589,72826823,72827293,72828508,72828776,72828984,72829635	Gene ID= ENSG00000168010.10 TPM= 35.03 Transcript Type= protein_coding
chr11	72814381	72829598	72814381	72829598	+	transcript5733.chr11.nic@ATG16L2	transcript5733.chr11.nic	protein_coding	72814381,72816728,72817756,72821668,72822044,72822478,72822848,72824734,72825302,72826173,72826518,72826703,72827188,72828359,72828729,72828883,72829303	72814563,72816827,72817855,72821741,72822295,72822543,72824122,72824842,72825407,72826243,72826589,72826823,72827293,72828508,72828776,72828984,72829598	Gene ID= ENSG00000168010.10 TPM= 9.43 Transcript Type= NA
chr11	72814381	72829598	72814381	72829598	+	transcript5749.chr11.nic@ATG16L2	transcript5749.chr11.nic	protein_coding	72814381,72816728,72817756,72821668,72822044,72822478,72824734,72825302,72826173,72826518,72826703,72827188,72828359,72828729,72828883,72829303	72814563,72816827,72817855,72821741,72822295,72824122,72824842,72825407,72826243,72826589,72826823,72827293,72828508,72828776,72828984,72829598	Gene ID= ENSG00000168010.10 TPM= 7.1 Transcript Type= NA
chr11	72814381	72829598	72814381	72829598	+	transcript5757.chr11.nic@ATG16L2	transcript5757.chr11.nic	protein_coding	72814381,72816728,72817756,72821668,72822044,72822478,72825302,72826173,72826518,72826703,72827188,72828359,72828729,72828883,72829303	72814563,72816827,72817855,72821741,72822295,72824842,72825407,72826243,72826589,72826823,72827293,72828508,72828776,72828984,72829598	Gene ID= ENSG00000168010.10 TPM= 5.15 Transcript Type= NA
chr11	72814419	72829635	72814419	72829635	+	ENST00000439504.6@ATG16L2	ENST00000439504.6	protein_coding	72814419,72816728,72817756,72821668,72822044,72822478,72822848,72825302,72826173,72826518,72826703,72827188,72828359,72828729,72828883,72829303	72814563,72816827,72817855,72821741,72822295,72822543,72824842,72825407,72826243,72826589,72826823,72827293,72828508,72828776,72828984,72829635	Gene ID= ENSG00000168010.10 TPM= 10.51 Transcript Type= retained_intron
chr11	72814415	72829633	72814415	72829633	+	ENST00000435507.6@ATG16L2	ENST00000435507.6	protein_coding	72814415,72816728,72817756,72821548,72822044,72822478,72822848,72824060,72824734,72825302,72826173,72826518,72826703,72827188,72828359,72828729,72828883,72829303	72814563,72816827,72817855,72821741,72822295,72822543,72822961,72824122,72824842,72825407,72826243,72826589,72826823,72827293,72828508,72828776,72828984,72829633	Gene ID= ENSG00000168010.10 TPM= 14.01 Transcript Type= nonsense_mediated_decay
chr11	72814427	72829633	72814427	72829633	+	ENST00000544490.5@ATG16L2	ENST00000544490.5	protein_coding	72814427,72816728,72817756,72821199,72822044,72822478,72824060,72824734,72825302,72826173,72826518,72826703,72827188,72828359,72828729,72828883,72829303	72814563,72816827,72817855,72821741,72822295,72823797,72824122,72824842,72825407,72826243,72826589,72826823,72827293,72828508,72828776,72828984,72829633	Gene ID= ENSG00000168010.10 TPM= 4.67 Transcript Type= nonsense_mediated_decay
chr11	72817243	72819503	72817243	72819503	-	transcript5773.chr11.nnic@NA	transcript5773.chr11.nnic	NA	72817243	72819503	Gene ID= novel_gene_chr11_5774 TPM= 7.01 Transcript Type= NA
chr11	72819753	72822233	72819753	72822233	-	transcript5775.chr11.nnic@NA	transcript5775.chr11.nnic	NA	72819753	72822233	Gene ID= novel_gene_chr11_5776 TPM= 2.34 Transcript Type= NA
chr11	72836745	73142299	72836745	73142299	-	transcript5707.chr11.nnic@FCHSD2	transcript5707.chr11.nnic	protein_coding	73141857,73140031,73015809,73000990,72988964,72985062,72984088,72921828,72902543,72889829,72887470,72867865,72849755,72843449,72843151,72842621,72841454,72840877,72836745	73142299,73140128,73015885,73001134,72989097,72985116,72984216,72921950,72902638,72889945,72887574,72868026,72849889,72843532,72843328,72842841,72841583,72840959,72838874	Gene ID= ENSG00000137478.14 TPM= 6.13 Transcript Type= NA
chr11	72836745	73142332	72836745	73142332	-	transcript5711.chr11.nic@FCHSD2	transcript5711.chr11.nic	protein_coding	73141857,73140031,73083695,73015809,73000990,72988964,72985062,72984088,72921828,72902543,72889829,72887470,72867865,72849755,72843449,72843151,72841454,72840877,72836745	73142332,73140128,73083740,73015885,73001134,72989097,72985116,72984216,72921950,72902638,72889945,72887574,72868026,72849889,72843532,72843328,72841583,72840959,72838874	Gene ID= ENSG00000137478.14 TPM= 7.59 Transcript Type= NA
chr11	72842954	73142510	72842954	73142510	-	transcript5750.chr11.nic@FCHSD2	transcript5750.chr11.nic	protein_coding	73141857,73140031,73083695,73015809,73000990,72988964,72985062,72984088,72921828,72902543,72889829,72887470,72867865,72849755,72843449,72842954	73142510,73140128,73083740,73015885,73001134,72989097,72985116,72984216,72921950,72902638,72889945,72887574,72868026,72849889,72843532,72843328	Gene ID= ENSG00000137478.14 TPM= 4.96 Transcript Type= NA
chr11	73077570	73142499	73077570	73142499	-	transcript5769.chr11.nnic@FCHSD2	transcript5769.chr11.nnic	protein_coding	73141857,73140031,73083695,73077570	73142499,73140128,73083740,73079496	Gene ID= ENSG00000137478.14 TPM= 3.5 Transcript Type= NA
chr11	73218298	73235932	73218298	73235932	+	ENST00000393597.6@P2RY2	ENST00000393597.6	protein_coding	73218298,73227981,73234156	73218432,73228175,73235932	Gene ID= ENSG00000175591.11 TPM= 4.67 Transcript Type= protein_coding
chr11	73238975	73242335	73238975	73242335	+	ENST00000565433.1@AP002761.4	ENST00000565433.1	sense_overlapping	73238975	73242335	Gene ID= ENSG00000260401.1 TPM= 3.5 Transcript Type= sense_overlapping
chr11	73269965	73274553	73269965	73274553	+	transcript5782.chr11.nnic@NA	transcript5782.chr11.nnic	NA	73269965	73274553	Gene ID= novel_gene_chr11_5783 TPM= 3.5 Transcript Type= NA
chr11	73308289	73369091	73308289	73369091	+	ENST00000263674.3@ARHGEF17	ENST00000263674.3	protein_coding	73308289,73346883,73352830,73355533,73355861,73356175,73356709,73357025,73357242,73359834,73360320,73361088,73362040,73362433,73363206,73363747,73364172,73364452,73365390,73365678,73367584	73311830,73346960,73353012,73355649,73355953,73356351,73356759,73357134,73357327,73359952,73360533,73361161,73362239,73362734,73363455,73363833,73364239,73364600,73365564,73365947,73369091	Gene ID= ENSG00000110237.3 TPM= 136.61 Transcript Type= protein_coding
chr11	73376264	73397472	73376264	73397472	+	ENST00000064780.6@RELT	ENST00000064780.6	protein_coding	73376264,73389112,73390551,73390755,73391144,73392211,73393837,73394236,73394477,73395087,73395444	73376499,73389181,73390625,73390921,73391223,73392468,73393917,73394317,73394734,73395285,73397472	Gene ID= ENSG00000054967.12 TPM= 11.68 Transcript Type= protein_coding
chr11	73387399	73396640	73387399	73396640	+	transcript5790.chr11.nic@RELT	transcript5790.chr11.nic	protein_coding	73387399,73390551,73390755,73391144,73392211,73393837,73394236,73394477,73395087,73395444	73389181,73390625,73390921,73391223,73392468,73393917,73394317,73394734,73395285,73396640	Gene ID= ENSG00000054967.12 TPM= 3.5 Transcript Type= NA
chr11	73647549	73662819	73647549	73662819	+	ENST00000227214.10@PLEKHB1	ENST00000227214.10	protein_coding	73647549,73649012,73650553,73651788,73652975,73660753,73661466	73647738,73649087,73650705,73651890,73653014,73660852,73662819	Gene ID= ENSG00000021300.13 TPM= 29.19 Transcript Type= protein_coding
chr11	73675638	73761137	73675638	73761137	-	ENST00000310653.10@RAB6A	ENST00000310653.10	protein_coding	73760566,73730765,73720846,73718785,73716251,73707420,73679654,73675638	73761137,73730823,73720899,73718890,73716362,73707513,73679720,73677962	Gene ID= ENSG00000175582.19 TPM= 22.97 Transcript Type= protein_coding
chr11	73675896	73761091	73675896	73761091	-	ENST00000336083.7@RAB6A	ENST00000336083.7	protein_coding	73760566,73730765,73720846,73718613,73716251,73707420,73679654,73675896	73761091,73730823,73720899,73718718,73716362,73707513,73679720,73677962	Gene ID= ENSG00000175582.19 TPM= 55.66 Transcript Type= protein_coding
chr11	73760312	73762142	73760312	73762142	+	transcript5815.chr11.nnic@AP002770.1	transcript5815.chr11.nnic	antisense_RNA	73760312,73760582	73760385,73762142	Gene ID= ENSG00000256034.1 TPM= 3.5 Transcript Type= NA
chr11	73787316	73864611	73787316	73864611	+	ENST00000310614.11@MRPL48	ENST00000310614.11	protein_coding	73787316,73805027,73808313,73825708,73844807,73859907,73863172,73864296	73787992,73805079,73808350,73825796,73844976,73860009,73863261,73864611	Gene ID= ENSG00000175581.13 TPM= 9.34 Transcript Type= protein_coding
chr11	73872667	73876988	73872667	73876988	-	ENST00000355693.4@COA4	ENST00000355693.4	protein_coding	73876757,73872667	73876988,73873394	Gene ID= ENSG00000181924.6 TPM= 5.84 Transcript Type= protein_coding
chr11	73876990	73927734	73876990	73927734	+	transcript5821.chr11.nic@PAAF1	transcript5821.chr11.nic	protein_coding	73876990,73878779,73887040,73887354,73891112,73899146,73900270,73909399,73914413,73916545,73918950,73924615,73927285	73877068,73878819,73887099,73887457,73891201,73899244,73900420,73909593,73914504,73916660,73919032,73924697,73927734	Gene ID= ENSG00000175575.12 TPM= 2.34 Transcript Type= NA
chr11	73876969	73931124	73876969	73931124	+	ENST00000310571.7@PAAF1	ENST00000310571.7	protein_coding	73876969,73878779,73887354,73891112,73899146,73900270,73909399,73914413,73916545,73918950,73924615,73927285	73877068,73878819,73887457,73891201,73899244,73900420,73909593,73914504,73916660,73919032,73924697,73931124	Gene ID= ENSG00000175575.12 TPM= 25.69 Transcript Type= protein_coding
chr11	73974667	73983307	73974667	73983307	-	ENST00000310473.7@UCP2	ENST00000310473.7	protein_coding	73982721,73981476,73978253,73977886,73976823,73976641,73975491,73974667	73983307,73981632,73978477,73978096,73977017,73976742,73975671,73975121	Gene ID= ENSG00000175567.8 TPM= 54.88 Transcript Type= protein_coding
chr11	74012714	74171019	74012714	74171019	-	ENST00000334126.11@C2CD3	ENST00000334126.11	protein_coding	74170738,74168344,74161399,74139605,74138720,74133425,74132844,74122988,74118228,74114384,74113780,74109034,74106371,74103131,74100525,74098009,74095228,74093816,74092416,74090813,74085618,74084881,74078115,74074253,74057406,74054607,74049337,74048205,74042054,74037478,74033351,74028287,74012714	74171019,74168613,74161556,74139828,74138967,74133557,74132972,74123135,74118382,74114593,74113892,74109152,74106493,74103625,74100676,74098255,74095408,74093999,74092588,74090936,74085886,74084970,74078717,74074600,74057544,74054671,74049542,74048338,74042218,74037698,74034278,74028398,74013525	Gene ID= ENSG00000168014.16 TPM= 5.84 Transcript Type= protein_coding
chr11	74021844	74026981	74021844	74026981	+	transcript5838.chr11.nnic@NA	transcript5838.chr11.nnic	NA	74021844	74026981	Gene ID= novel_gene_chr11_5839 TPM= 3.5 Transcript Type= NA
chr11	74171099	74254703	74171099	74254703	+	ENST00000328257.12@PPME1	ENST00000328257.12	protein_coding	74171099,74203728,74204353,74222312,74225205,74230245,74230912,74235901,74239133,74246076,74247079,74250954,74251648,74253492	74171522,74203821,74204445,74222369,74225256,74230399,74231002,74235966,74239256,74246205,74247123,74251018,74251715,74254703	Gene ID= ENSG00000214517.9 TPM= 73.56 Transcript Type= protein_coding
chr11	74330318	74398473	74330318	74398473	-	ENST00000298198.4@PGM2L1	ENST00000298198.4	protein_coding	74398051,74374415,74371711,74370902,74368492,74351383,74347148,74346732,74345469,74343323,74342885,74342461,74338468,74330318	74398473,74374582,74371817,74370986,74368575,74351576,74347337,74346829,74345649,74343416,74343014,74342650,74338601,74336754	Gene ID= ENSG00000165434.7 TPM= 5.84 Transcript Type= protein_coding
chr11	74455067	74462146	74455067	74462146	-	transcript5849.chr11.nnic@KCNE3	transcript5849.chr11.nnic	protein_coding	74461955,74456323,74455067	74462146,74457603,74455802	Gene ID= ENSG00000175538.10 TPM= 2.34 Transcript Type= NA
chr11	74454841	74467628	74454841	74467628	-	ENST00000310128.8@KCNE3	ENST00000310128.8	protein_coding	74467398,74461955,74454841	74467628,74462103,74457603	Gene ID= ENSG00000175538.10 TPM= 2.34 Transcript Type= protein_coding
chr11	74491843	74493733	74491843	74493733	-	ENST00000310109.4@LIPT2	ENST00000310109.4	protein_coding	74493238,74491843	74493733,74492364	Gene ID= ENSG00000175536.6 TPM= 2.34 Transcript Type= protein_coding
chr11	74493366	74498533	74493366	74498533	+	ENST00000526036.1@AP001372.2	ENST00000526036.1	bidirectional_promoter_lncRNA	74493366,74496649	74493973,74498533	Gene ID= ENSG00000254837.2 TPM= 1.17 Transcript Type= bidirectional_promoter_lncRNA
chr11	74592530	74643057	74592530	74643057	+	ENST00000263681.6@POLD3	ENST00000263681.6	protein_coding	74592530,74594061,74604692,74611499,74612878,74618537,74620017,74625408,74629217,74634583,74636197,74640564	74592718,74594116,74604794,74611538,74613010,74618804,74620089,74625573,74629323,74634695,74636275,74643057	Gene ID= ENSG00000077514.8 TPM= 15.18 Transcript Type= protein_coding
chr11	74592576	74642736	74592576	74642736	+	transcript5864.chr11.nic@POLD3	transcript5864.chr11.nic	protein_coding	74592576,74594061,74604692,74611499,74612878,74618537,74620017,74625408,74634583,74636197,74640564	74592718,74594116,74604794,74611538,74613010,74618804,74620089,74629323,74634695,74636275,74642736	Gene ID= ENSG00000077514.8 TPM= 3.5 Transcript Type= NA
chr11	74745716	74746114	74745716	74746114	-	ENST00000428553.1@AP001324.1	ENST00000428553.1	processed_pseudogene	74745716	74746114	Gene ID= ENSG00000227615.1 TPM= 22.18 Transcript Type= processed_pseudogene
chr11	74748868	74842413	74748868	74842413	+	ENST00000299563.4@RNF169	ENST00000299563.4	protein_coding	74748868,74789626,74810184,74817596,74834676,74835546	74749382,74789699,74810330,74817714,74834775,74842413	Gene ID= ENSG00000166439.5 TPM= 11.68 Transcript Type= protein_coding
chr11	74840910	74949102	74840910	74949102	-	transcript5866.chr11.nic@XRRA1	transcript5866.chr11.nic	protein_coding	74948928,74945018,74936884,74933801,74930300,74927391,74921214,74907145,74906239,74851989,74851088,74848115,74845073,74844168,74843854,74840910	74949102,74945085,74937068,74933872,74930372,74927488,74921347,74907273,74906456,74852082,74851203,74848462,74845271,74844283,74843959,74843453	Gene ID= ENSG00000166435.15 TPM= 3.5 Transcript Type= NA
chr11	74846921	74851876	74846921	74851876	-	transcript5874.chr11.nnic@NA	transcript5874.chr11.nnic	NA	74846921	74851876	Gene ID= novel_gene_chr11_5875 TPM= 2.34 Transcript Type= NA
chr11	74949247	74979031	74949247	74979031	+	ENST00000263672.10@SPCS2	ENST00000263672.10	protein_coding	74949247,74965034,74965763,74969565,74976857	74949399,74965117,74965923,74969699,74979031	Gene ID= ENSG00000118363.11 TPM= 25.69 Transcript Type= protein_coding
chr11	74988911	75020676	74988911	75020676	+	transcript5884.chr11.nic@NEU3	transcript5884.chr11.nic	protein_coding	74988911,74994509,75005413,75018691	74989154,74994720,75005625,75020676	Gene ID= ENSG00000162139.9 TPM= 2.34 Transcript Type= NA
chr11	74988134	75010907	74988134	75010907	+	ENST00000294064.8@NEU3	ENST00000294064.8	protein_coding	74988134,74994509,75005413	74989154,74994720,75010907	Gene ID= ENSG00000162139.9 TPM= 11.68 Transcript Type= protein_coding
chr11	75203381	75206254	75203381	75206254	+	ENST00000341411.5@SLCO2B1	ENST00000341411.5	protein_coding	75203381	75206254	Gene ID= ENSG00000137491.14 TPM= 22.18 Transcript Type= retained_intron
chr11	75260126	75265380	75260126	75265380	-	transcript5961.chr11.nnic@NA	transcript5961.chr11.nnic	NA	75260126	75265380	Gene ID= novel_gene_chr11_5962 TPM= 87.57 Transcript Type= NA
chr11	75260129	75262466	75260129	75262466	-	ENST00000624624.1@AP001972.5	ENST00000624624.1	TEC	75260129	75262466	Gene ID= ENSG00000279117.1 TPM= 14.01 Transcript Type= TEC
chr11	75265599	75351705	75265599	75351705	-	ENST00000360025.7@ARRB1	ENST00000360025.7	protein_coding	75351588,75290009,75287315,75284235,75283287,75281962,75281075,75278609,75277364,75276839,75274074,75272895,75268889,75267652,75265599	75351705,75290039,75287375,75284279,75283483,75282021,75281142,75278744,75277448,75276911,75274211,75272978,75268959,75267703,75266274	Gene ID= ENSG00000137486.16 TPM= 8.17 Transcript Type= protein_coding
chr11	75272030	75274808	75272030	75274808	+	transcript5953.chr11.nnic@NA	transcript5953.chr11.nnic	NA	75272030	75274808	Gene ID= novel_gene_chr11_5954 TPM= 12.84 Transcript Type= NA
chr11	75298097	75301155	75298097	75301155	+	transcript5955.chr11.nnic@NA	transcript5955.chr11.nnic	NA	75298097	75301155	Gene ID= novel_gene_chr11_5956 TPM= 3.5 Transcript Type= NA
chr11	75301424	75303033	75301424	75303033	+	transcript5959.chr11.nnic@NA	transcript5959.chr11.nnic	NA	75301424	75303033	Gene ID= novel_gene_chr11_5960 TPM= 2.34 Transcript Type= NA
chr11	75305020	75307486	75305020	75307486	-	transcript5963.chr11.nnic@NA	transcript5963.chr11.nnic	NA	75305020	75307486	Gene ID= novel_gene_chr11_5964 TPM= 3.5 Transcript Type= NA
chr11	75310416	75316337	75310416	75316337	+	transcript5951.chr11.nnic@NA	transcript5951.chr11.nnic	NA	75310416	75316337	Gene ID= novel_gene_chr11_5952 TPM= 7.01 Transcript Type= NA
chr11	75399486	75406913	75399486	75406913	+	ENST00000531188.5@RPS3	ENST00000531188.5	protein_coding	75399486,75400694,75401640,75402352,75404020,75404672,75405614	75399577,75400824,75401733,75402446,75404207,75404868,75406913	Gene ID= ENSG00000149273.14 TPM= 1070.3 Transcript Type= protein_coding
chr11	75399520	75405884	75399520	75405884	+	ENST00000422465.6@RPS3	ENST00000422465.6	protein_coding	75399520,75401640,75402352,75404020,75404672,75405614	75399577,75401733,75402446,75404207,75404868,75405884	Gene ID= ENSG00000149273.14 TPM= 1.37 Transcript Type= protein_coding
chr11	75399531	75422280	75399531	75422280	+	ENST00000527446.5@RPS3	ENST00000527446.5	protein_coding	75399531,75400694,75401640,75402352,75404020,75404672,75421727	75399577,75400824,75401733,75402446,75404207,75404868,75422280	Gene ID= ENSG00000149273.14 TPM= 14.79 Transcript Type= protein_coding
chr11	75399530	75405692	75399530	75405692	+	ENST00000532872.5@RPS3	ENST00000532872.5	protein_coding	75399530,75400694,75401640,75404020,75404672,75405614	75399577,75400824,75401733,75404207,75404868,75405692	Gene ID= ENSG00000149273.14 TPM= 13.43 Transcript Type= nonsense_mediated_decay
chr11	75399519	75405692	75399519	75405692	+	ENST00000530721.5@RPS3	ENST00000530721.5	protein_coding	75399519,75400694,75401640,75402352,75404020,75404672,75405614	75399577,75400777,75401733,75402446,75404207,75404868,75405692	Gene ID= ENSG00000149273.14 TPM= 25.1 Transcript Type= nonsense_mediated_decay
chr11	75399557	75405692	75399557	75405692	+	ENST00000526248.5@RPS3	ENST00000526248.5	protein_coding	75399557,75400694,75401640,75402352,75404054,75404672,75405614	75399577,75400824,75401733,75402446,75404207,75404868,75405692	Gene ID= ENSG00000149273.14 TPM= 9.92 Transcript Type= nonsense_mediated_decay
chr11	75422396	75430629	75422396	75430629	-	ENST00000539798.1@KLHL35	ENST00000539798.1	protein_coding	75429749,75428442,75426520,75425393,75423692,75422396	75430629,75428626,75426638,75425581,75423880,75422768	Gene ID= ENSG00000149243.15 TPM= 9.34 Transcript Type= protein_coding
chr11	75434640	75525914	75434640	75525914	-	transcript5977.chr11.nnic@GDPD5	transcript5977.chr11.nnic	protein_coding	75525210,75506653,75490237,75479244,75477619,75462786,75457693,75456757,75449885,75449517,75448977,75444413,75443136,75442363,75441646,75441163,75439879,75436936,75434640	75525914,75506825,75490320,75479488,75477795,75462889,75457786,75456816,75449983,75449610,75449122,75444495,75443286,75442581,75441803,75441310,75439961,75437048,75435655	Gene ID= ENSG00000158555.14 TPM= 5.25 Transcript Type= NA
chr11	75434640	75525935	75434640	75525935	-	transcript5978.chr11.nic@GDPD5	transcript5978.chr11.nic	protein_coding	75525789,75525210,75490237,75479244,75477619,75462786,75457693,75456757,75449885,75449517,75448977,75444413,75443136,75442363,75441646,75441163,75439879,75436936,75434640	75525935,75525573,75490320,75479488,75477795,75462889,75457786,75456816,75449983,75449610,75449122,75444495,75443286,75442581,75441803,75441310,75439961,75437048,75435655	Gene ID= ENSG00000158555.14 TPM= 5.84 Transcript Type= NA
chr11	75434640	75525963	75434640	75525963	-	transcript5980.chr11.nic@GDPD5	transcript5980.chr11.nic	protein_coding	75525210,75490237,75479244,75477619,75462786,75457693,75456757,75449885,75449517,75448977,75444413,75443136,75442363,75441646,75441163,75439879,75436936,75434640	75525963,75490320,75479488,75477795,75462889,75457786,75456816,75449983,75449610,75449122,75444495,75443286,75442581,75441803,75441310,75439961,75437048,75435655	Gene ID= ENSG00000158555.14 TPM= 19.85 Transcript Type= NA
chr11	75434640	75525903	75434640	75525903	-	ENST00000336898.7@GDPD5	ENST00000336898.7	protein_coding	75525210,75490237,75477619,75462786,75457693,75456757,75449885,75449517,75448977,75444413,75443136,75442363,75441646,75441163,75439879,75436936,75434640	75525903,75490320,75477795,75462889,75457786,75456816,75449983,75449610,75449122,75444495,75443286,75442581,75441803,75441310,75439961,75437048,75435655	Gene ID= ENSG00000158555.14 TPM= 15.76 Transcript Type= protein_coding
chr11	75562056	75572783	75562056	75572783	+	ENST00000533603.5@SERPINH1	ENST00000533603.5	protein_coding	75562056,75563727,75566316,75568731,75568939,75571781	75562319,75563770,75566971,75568829,75569171,75572783	Gene ID= ENSG00000149257.13 TPM= 16.35 Transcript Type= protein_coding
chr11	75562086	75572783	75562086	75572783	+	ENST00000358171.7@SERPINH1	ENST00000358171.7	protein_coding	75562086,75566316,75568731,75568939,75571781	75562319,75566971,75568829,75569171,75572783	Gene ID= ENSG00000149257.13 TPM= 110.92 Transcript Type= protein_coding
chr11	75586918	75669120	75586918	75669120	-	ENST00000304771.7@MAP6	ENST00000304771.7	protein_coding	75667465,75608109,75605808,75586918	75669120,75608322,75606004,75588184	Gene ID= ENSG00000171533.11 TPM= 16.93 Transcript Type= protein_coding
chr11	75586918	75668596	75586918	75668596	-	transcript5993.chr11.nic@MAP6	transcript5993.chr11.nic	protein_coding	75667465,75605808,75586918	75668596,75608322,75588184	Gene ID= ENSG00000171533.11 TPM= 2.92 Transcript Type= NA
chr11	75667352	75670965	75667352	75670965	+	transcript5997.chr11.nnic@NA	transcript5997.chr11.nnic	NA	75667352	75670965	Gene ID= novel_gene_chr11_5998 TPM= 2.34 Transcript Type= NA
chr11	75768732	75801534	75768732	75801534	+	ENST00000228027.11@DGAT2	ENST00000228027.11	protein_coding	75768732,75784618,75790188,75790661,75796328,75797158,75798227,75800354	75769112,75784746,75790295,75790731,75796532,75797332,75798429,75801534	Gene ID= ENSG00000062282.14 TPM= 18.68 Transcript Type= protein_coding
chr11	75815189	75961549	75815189	75961549	+	transcript6014.chr11.nic@UVRAG	transcript6014.chr11.nic	protein_coding	75815189,75851883,75861746,75879879,75888829,75911954,75961444	75815524,75852000,75861780,75880040,75888903,75912039,75961549	Gene ID= ENSG00000198382.8 TPM= 3.5 Transcript Type= NA
chr11	76186409	76210761	76186409	76210761	-	transcript6019.chr11.nnic@WNT11	transcript6019.chr11.nnic	protein_coding	76210472,76206325,76196483,76194567,76191564,76186409	76210761,76206498,76196718,76194844,76191856,76187239	Gene ID= ENSG00000085741.12 TPM= 2.34 Transcript Type= NA
chr11	76186325	76206532	76186325	76206532	-	ENST00000322563.7@WNT11	ENST00000322563.7	protein_coding	76206325,76196483,76194567,76191564,76186325	76206532,76196718,76194844,76191856,76187239	Gene ID= ENSG00000085741.12 TPM= 5.84 Transcript Type= protein_coding
chr11	76349956	76381132	76349956	76381132	-	transcript6029.chr11.nnic@THAP12	transcript6029.chr11.nnic	protein_coding	76380748,76365780,76360956,76355618,76349956	76381132,76365972,76361063,76355654,76352794	Gene ID= ENSG00000137492.7 TPM= 3.5 Transcript Type= NA
chr11	76349956	76380942	76349956	76380942	-	ENST00000260045.7@THAP12	ENST00000260045.7	protein_coding	76380748,76365852,76360956,76355618,76349956	76380942,76365972,76361063,76355654,76352794	Gene ID= ENSG00000137492.7 TPM= 74.73 Transcript Type= protein_coding
chr11	76445022	76453931	76445022	76453931	+	ENST00000533988.5@EMSY	ENST00000533988.5	protein_coding	76445022,76446900,76451858,76453314	76445128,76447008,76451957,76453931	Gene ID= ENSG00000158636.16 TPM= 1.17 Transcript Type= protein_coding
chr11	76652438	76656356	76652438	76656356	-	transcript6040.chr11.nnic@NA	transcript6040.chr11.nnic	NA	76652438	76656356	Gene ID= novel_gene_chr11_6041 TPM= 14.01 Transcript Type= NA
chr11	76657527	76670746	76657527	76670746	-	transcript6043.chr11.nnic@LRRC32	transcript6043.chr11.nnic	protein_coding	76670614,76665848,76659583,76657527	76670746,76665958,76661508,76658034	Gene ID= ENSG00000137507.11 TPM= 2.34 Transcript Type= NA
chr11	76657534	76670810	76657534	76670810	-	transcript6049.chr11.nnic@LRRC32	transcript6049.chr11.nnic	protein_coding	76670614,76665871,76659142,76657534	76670810,76665958,76661508,76658034	Gene ID= ENSG00000137507.11 TPM= 5.06 Transcript Type= NA
chr11	76657570	76670747	76657570	76670747	-	transcript6055.chr11.nic@LRRC32	transcript6055.chr11.nic	protein_coding	76670614,76665871,76657570	76670747,76665958,76658034	Gene ID= ENSG00000137507.11 TPM= 4.67 Transcript Type= NA
chr11	76657527	76670747	76657527	76670747	-	ENST00000404995.5@LRRC32	ENST00000404995.5	protein_coding	76670614,76665871,76659583,76657527	76670747,76665958,76661508,76658034	Gene ID= ENSG00000137507.11 TPM= 48.26 Transcript Type= protein_coding
chr11	76657524	76670747	76657524	76670747	-	ENST00000260061.9@LRRC32	ENST00000260061.9	protein_coding	76670614,76665871,76657524	76670747,76665958,76661508	Gene ID= ENSG00000137507.11 TPM= 66.94 Transcript Type= protein_coding
chr11	76764863	76768608	76764863	76768608	-	transcript6059.chr11.nnic@AP003119.1	transcript6059.chr11.nnic	antisense_RNA	76768511,76764863	76768608,76768211	Gene ID= ENSG00000254632.1 TPM= 3.5 Transcript Type= NA
chr11	76783239	76798154	76783239	76798154	+	ENST00000333090.4@TSKU	ENST00000333090.4	protein_coding	76783239,76795609	76783404,76798154	Gene ID= ENSG00000182704.7 TPM= 66.55 Transcript Type= protein_coding
chr11	76860873	77026797	76860873	77026797	+	ENST00000532485.5@ACER3	ENST00000532485.5	protein_coding	76860873,76926557,76958979,76976289,76985643,76990539,76998763,77015016,77016675,77019731,77020274	76861079,76926667,76959031,76976341,76985724,76990574,76998821,77015117,77016779,77019776,77026797	Gene ID= ENSG00000078124.11 TPM= 4.67 Transcript Type= protein_coding
chr11	76860918	76980700	76860918	76980700	+	transcript6076.chr11.nic@ACER3	transcript6076.chr11.nic	protein_coding	76860918,76926557,76958979,76976289	76861079,76926667,76959031,76980700	Gene ID= ENSG00000078124.11 TPM= 2.34 Transcript Type= NA
chr11	77034398	77041973	77034398	77041973	+	ENST00000622824.1@B3GNT6	ENST00000622824.1	protein_coding	77034398,77039552	77034478,77041973	Gene ID= ENSG00000198488.10 TPM= 1.17 Transcript Type= protein_coding
chr11	77066941	77126155	77066941	77126155	+	ENST00000278559.7@CAPN5	ENST00000278559.7	protein_coding	77066941,77084852,77093682,77112589,77114242,77115395,77116226,77118157,77119030,77120713,77121934,77122576,77123688	77067094,77085051,77093813,77112797,77114434,77115588,77116303,77118352,77119152,77120909,77122049,77122712,77126155	Gene ID= ENSG00000149260.15 TPM= 8.17 Transcript Type= protein_coding
chr11	77322022	77411999	77322022	77411999	-	transcript6091.chr11.nic@PAK1	transcript6091.chr11.nic	protein_coding	77411774,77392331,77379894,77379241,77374328,77358898,77355668,77353536,77349239,77343819,77340646,77337324,77336086,77332730,77325328,77322022	77411999,77392541,77379994,77379388,77374365,77359017,77355842,77353599,77349287,77343931,77340763,77337423,77336282,77332867,77325376,77323360	Gene ID= ENSG00000149269.9 TPM= 4.67 Transcript Type= NA
chr11	77321549	77411999	77321549	77411999	-	transcript6092.chr11.nic@PAK1	transcript6092.chr11.nic	protein_coding	77411774,77392331,77379894,77379241,77374328,77358898,77355668,77353536,77349239,77343819,77340646,77337324,77336086,77332730,77321549	77411999,77392541,77379994,77379388,77374365,77359017,77355842,77353599,77349287,77343931,77340763,77337423,77336282,77332867,77323360	Gene ID= ENSG00000149269.9 TPM= 3.5 Transcript Type= NA
chr11	77321707	77474062	77321707	77474062	-	ENST00000356341.7@PAK1	ENST00000356341.7	protein_coding	77473552,77392331,77379894,77379241,77374328,77358898,77355668,77353536,77349239,77343819,77340646,77337324,77336086,77332730,77321707	77474062,77392541,77379994,77379388,77374365,77359017,77355842,77353599,77349287,77343931,77340763,77337423,77336282,77332867,77323360	Gene ID= ENSG00000149269.9 TPM= 8.17 Transcript Type= protein_coding
chr11	77589635	77610355	77589635	77610355	+	ENST00000313578.3@AQP11	ENST00000313578.3	protein_coding	77589635,77603556,77609298	77590611,77603672,77610355	Gene ID= ENSG00000178301.3 TPM= 1.17 Transcript Type= protein_coding
chr11	77659996	77821017	77659996	77821017	-	ENST00000308488.10@RSF1	ENST00000308488.10	protein_coding	77820528,77764598,77747036,77740731,77725545,77700721,77698487,77693507,77691159,77685105,77683710,77678086,77676792,77675036,77672042,77659996	77821017,77764689,77747128,77740936,77725699,77702495,77698693,77693611,77691238,77685159,77683819,77678153,77676999,77675256,77672230,77667491	Gene ID= ENSG00000048649.13 TPM= 3.5 Transcript Type= protein_coding
chr11	77813162	77820739	77813162	77820739	-	transcript6133.chr11.nnic@RSF1	transcript6133.chr11.nnic	protein_coding	77820528,77813162	77820739,77813708	Gene ID= ENSG00000048649.13 TPM= 2.34 Transcript Type= NA
chr11	77821129	77872352	77821129	77872352	+	ENST00000526415.5@AAMDC	ENST00000526415.5	protein_coding	77821129,77841019,77842479,77869722,77872175	77821241,77841060,77842628,77869817,77872352	Gene ID= ENSG00000087884.14 TPM= 4.09 Transcript Type= protein_coding
chr11	77821140	77918576	77821140	77918576	+	transcript6132.chr11.nnic@AAMDC	transcript6132.chr11.nnic	protein_coding	77821140,77841019,77842479,77918061	77821241,77841060,77842628,77918576	Gene ID= ENSG00000087884.14 TPM= 2.34 Transcript Type= NA
chr11	77821144	77872361	77821144	77872361	+	ENST00000393427.6@AAMDC	ENST00000393427.6	protein_coding	77821144,77842479,77869722,77872175	77821241,77842628,77869817,77872361	Gene ID= ENSG00000087884.14 TPM= 2.92 Transcript Type= protein_coding
chr11	77878720	77994678	77878720	77994678	-	ENST00000534064.5@INTS4	ENST00000534064.5	protein_coding	77994590,77991108,77981459,77978996,77960953,77960341,77958746,77955942,77941180,77938651,77928342,77924750,77922356,77921340,77918821,77907717,77903540,77901421,77894290,77891681,77891319,77883832,77878720	77994678,77991299,77981576,77979102,77961138,77960391,77958834,77956062,77941251,77938825,77928547,77924892,77922471,77921473,77918978,77907810,77903620,77901551,77894349,77891840,77891462,77883952,77879127	Gene ID= ENSG00000149262.16 TPM= 12.84 Transcript Type= protein_coding
chr11	77924442	77994666	77924442	77994666	-	ENST00000529807.5@INTS4	ENST00000529807.5	protein_coding	77994590,77991108,77981459,77978996,77960953,77960341,77958746,77955942,77941180,77938651,77928342,77924442	77994666,77991299,77981576,77979102,77961138,77960391,77958834,77956062,77941251,77938825,77928547,77924892	Gene ID= ENSG00000149262.16 TPM= 1.17 Transcript Type= protein_coding
chr11	78015715	78023294	78015715	78023294	-	ENST00000353172.5@KCTD14	ENST00000353172.5	protein_coding	78023160,78015715	78023294,78017270	Gene ID= ENSG00000151364.16 TPM= 26.85 Transcript Type= protein_coding
chr11	78069858	78081898	78069858	78081898	-	transcript6136.chr11.nnic@NDUFC2	transcript6136.chr11.nnic	protein_coding	78081827,78079579,78072998,78069858	78081898,78079786,78073141,78070036	Gene ID= ENSG00000151366.12 TPM= 3.5 Transcript Type= NA
chr11	78069856	78079819	78069856	78079819	-	ENST00000534029.5@NDUFC2	ENST00000534029.5	protein_coding	78079579,78069856	78079819,78070036	Gene ID= ENSG00000151366.12 TPM= 1.17 Transcript Type= protein_coding
chr11	78100942	78139660	78100942	78139660	-	ENST00000299626.9@ALG8	ENST00000299626.9	protein_coding	78139494,78127358,78124021,78121065,78119182,78114266,78113886,78112650,78109442,78106807,78104356,78103980,78100942	78139660,78127436,78124214,78121174,78119249,78114392,78113989,78112770,78109581,78106946,78104453,78104052,78101195	Gene ID= ENSG00000159063.12 TPM= 26.85 Transcript Type= protein_coding
chr11	78100947	78139592	78100947	78139592	-	ENST00000376156.7@ALG8	ENST00000376156.7	protein_coding	78139494,78127358,78124021,78121065,78119182,78114266,78113886,78112650,78109442,78106807,78104356,78103980,78102874,78100947	78139592,78127436,78124214,78121174,78119249,78114392,78113989,78112770,78109581,78106946,78104453,78104052,78102948,78101195	Gene ID= ENSG00000159063.12 TPM= 4.67 Transcript Type= protein_coding
chr11	78171249	78188822	78171249	78188822	-	ENST00000340067.3@KCTD21	ENST00000340067.3	protein_coding	78188573,78171249	78188822,78174583	Gene ID= ENSG00000188997.7 TPM= 7.01 Transcript Type= protein_coding
chr11	78188907	78214711	78188907	78214711	+	ENST00000529308.5@USP35	ENST00000529308.5	protein_coding	78188907,78196236,78197936,78199595,78200133,78200650,78205842,78207530,78208857,78209448,78213646	78189157,78196918,78198068,78199724,78200234,78200808,78206035,78207623,78208963,78210744,78214711	Gene ID= ENSG00000118369.12 TPM= 7.01 Transcript Type= protein_coding
chr11	78245930	78417890	78245930	78417890	-	transcript6149.chr11.nic@GAB2	transcript6149.chr11.nic	protein_coding	78417646,78280601,78245930	78417890,78280901,78250400	Gene ID= ENSG00000033327.12 TPM= 2.34 Transcript Type= NA
chr11	78215297	78417806	78215297	78417806	-	ENST00000361507.4@GAB2	ENST00000361507.4	protein_coding	78417646,78280601,78250157,78226465,78225108,78223412,78222105,78221677,78220319,78215297	78417806,78280901,78250400,78227051,78225202,78223676,78222195,78221779,78220444,78219415	Gene ID= ENSG00000033327.12 TPM= 32.69 Transcript Type= protein_coding
chr11	78435961	78574864	78435961	78574864	-	ENST00000281038.9@NARS2	ENST00000281038.9	protein_coding	78574348,78571335,78568632,78566132,78559539,78528842,78493063,78478585,78478438,78469247,78465876,78443661,78441091,78435961	78574864,78571444,78568752,78566272,78559619,78528936,78493195,78478683,78478475,78469313,78466013,78443758,78441117,78436814	Gene ID= ENSG00000137513.9 TPM= 28.02 Transcript Type= protein_coding
chr11	82689530	82689935	82689530	82689935	+	transcript6155.chr11.nnic@NA	transcript6155.chr11.nnic	NA	82689530	82689935	Gene ID= novel_gene_chr11_6156 TPM= 9.34 Transcript Type= NA
chr11	82823502	82900597	82823502	82900597	-	ENST00000313010.7@PRCP	ENST00000313010.7	protein_coding	82900235,82859977,82853177,82850324,82849914,82849049,82839261,82838387,82823502	82900597,82860117,82853278,82850505,82850071,82849218,82839425,82838574,82825122	Gene ID= ENSG00000137509.10 TPM= 123.76 Transcript Type= protein_coding
chr11	82824368	82900430	82824368	82900430	-	ENST00000393399.6@PRCP	ENST00000393399.6	protein_coding	82900235,82884823,82859977,82853177,82850324,82849914,82849049,82839261,82838387,82824368	82900430,82884885,82860117,82853278,82850505,82850071,82849218,82839425,82838574,82825122	Gene ID= ENSG00000137509.10 TPM= 6.42 Transcript Type= protein_coding
chr11	82979268	83071923	82979268	83071923	-	ENST00000534141.5@RAB30	ENST00000534141.5	protein_coding	83071691,82997224,82994039,82987591,82979268	83071923,82997324,82994122,82987770,82982415	Gene ID= ENSG00000137502.9 TPM= 2.34 Transcript Type= protein_coding
chr11	83072066	83073646	83072066	83073646	+	ENST00000501011.6@RAB30-AS1	ENST00000501011.6	lincRNA	83072066,83072623,83073303	83072146,83072804,83073646	Gene ID= ENSG00000246067.7 TPM= 2.34 Transcript Type= lincRNA
chr11	83072343	83073600	83072343	83073600	+	ENST00000528156.1@RAB30-AS1	ENST00000528156.1	lincRNA	83072343,83073303	83072702,83073600	Gene ID= ENSG00000246067.7 TPM= 1.17 Transcript Type= lincRNA
chr11	83156988	83187451	83156988	83187451	+	ENST00000298281.8@PCF11	ENST00000298281.8	protein_coding	83156988,83161327,83163679,83164207,83165600,83167125,83167415,83168428,83171818,83177085,83177714,83181008,83181854,83182399,83183038,83184679	83157631,83161452,83163867,83164401,83166714,83167308,83167505,83169995,83171914,83177204,83177819,83181191,83182009,83182491,83183073,83187451	Gene ID= ENSG00000165494.11 TPM= 1.17 Transcript Type= protein_coding
chr11	83157155	83185790	83157155	83185790	+	transcript6179.chr11.nic@PCF11	transcript6179.chr11.nic	protein_coding	83157155,83161327,83163679,83164207,83165600,83167125,83167415,83168428,83171818,83177085,83177714,83181008,83181854,83182399,83183038,83184679	83157631,83161452,83163867,83164401,83166714,83167308,83167898,83169995,83171914,83177204,83177819,83181191,83182009,83182491,83183073,83185790	Gene ID= ENSG00000165494.11 TPM= 2.34 Transcript Type= NA
chr11	83157143	83168687	83157143	83168687	+	ENST00000530304.5@PCF11	ENST00000530304.5	protein_coding	83157143,83161327,83163679,83164207,83165600,83167125,83167415,83168428	83157631,83161452,83163867,83164401,83166714,83167308,83167505,83168687	Gene ID= ENSG00000165494.11 TPM= 1.17 Transcript Type= protein_coding
chr11	83157160	83158879	83157160	83158879	+	ENST00000624931.1@PCF11	ENST00000624931.1	protein_coding	83157160	83158879	Gene ID= ENSG00000165494.11 TPM= 4.67 Transcript Type= TEC
chr11	83160323	83163867	83160323	83163867	-	transcript6181.chr11.nnic@NA	transcript6181.chr11.nnic	NA	83160323	83163867	Gene ID= novel_gene_chr11_6182 TPM= 44.37 Transcript Type= NA
chr11	83193716	83256099	83193716	83256099	+	transcript6189.chr11.nic@ANKRD42	transcript6189.chr11.nic	protein_coding	83193716,83198479,83206058,83210300,83211295,83224855,83227747,83236404,83240759,83245498,83247943,83255845	83194728,83198642,83206165,83210419,83211430,83225055,83227872,83236509,83240934,83245624,83248087,83256099	Gene ID= ENSG00000137494.13 TPM= 4.67 Transcript Type= NA
chr11	83193716	83215197	83193716	83215197	+	transcript6215.chr11.nnic@ANKRD42	transcript6215.chr11.nnic	protein_coding	83193716,83198479,83206058,83210300,83211295,83213916	83194728,83198642,83206165,83210419,83211430,83215197	Gene ID= ENSG00000137494.13 TPM= 2.34 Transcript Type= NA
chr11	83193716	83211647	83193716	83211647	+	transcript6218.chr11.nic@ANKRD42	transcript6218.chr11.nic	protein_coding	83193716,83198479,83206058,83210300,83211295	83194728,83198642,83206165,83210419,83211647	Gene ID= ENSG00000137494.13 TPM= 2.34 Transcript Type= NA
chr11	83193739	83215200	83193739	83215200	+	ENST00000393389.7@ANKRD42	ENST00000393389.7	protein_coding	83193739,83198479,83206058,83210300,83211295,83212653	83194728,83198642,83206165,83210419,83211430,83215200	Gene ID= ENSG00000137494.13 TPM= 7.01 Transcript Type= protein_coding
chr11	83259097	83286407	83259097	83286407	-	ENST00000529689.5@CCDC90B	ENST00000529689.5	protein_coding	83285873,83280141,83278726,83274639,83273951,83273793,83273647,83265865,83259097	83286407,83280260,83278829,83274740,83273992,83273864,83273700,83265979,83261966	Gene ID= ENSG00000137500.9 TPM= 1.17 Transcript Type= protein_coding
chr11	83261317	83286390	83261317	83286390	-	ENST00000455220.6@CCDC90B	ENST00000455220.6	protein_coding	83286100,83280141,83278726,83274639,83273951,83273793,83273647,83265865,83261317	83286390,83280260,83278829,83274740,83273992,83273864,83273700,83265979,83261966	Gene ID= ENSG00000137500.9 TPM= 1.17 Transcript Type= protein_coding
chr11	85628573	85636539	85628573	85636539	+	ENST00000393375.5@TMEM126B	ENST00000393375.5	protein_coding	85628573,85631145,85631687,85634086,85635667,85636046	85628688,85631316,85631808,85634279,85635778,85636539	Gene ID= ENSG00000171204.12 TPM= 2.92 Transcript Type= protein_coding
chr11	85628585	85636536	85628585	85636536	+	transcript6224.chr11.nic@TMEM126B	transcript6224.chr11.nic	protein_coding	85628585,85631145,85631687,85634086,85635667	85628688,85631316,85631808,85634279,85636536	Gene ID= ENSG00000171204.12 TPM= 2.34 Transcript Type= NA
chr11	85628585	85636502	85628585	85636502	+	ENST00000358867.10@TMEM126B	ENST00000358867.10	protein_coding	85628585,85631687,85634086,85635667,85636046	85628688,85631808,85634279,85635778,85636502	Gene ID= ENSG00000171204.12 TPM= 11.68 Transcript Type= protein_coding
chr11	85628605	85636510	85628605	85636510	+	ENST00000529197.1@TMEM126B	ENST00000529197.1	protein_coding	85628605,85631145,85631687,85634086,85635667,85636046	85628688,85631316,85631808,85634279,85635778,85636510	Gene ID= ENSG00000171204.12 TPM= 1.75 Transcript Type= nonsense_mediated_decay
chr11	85628602	85636536	85628602	85636536	+	ENST00000534341.1@TMEM126B	ENST00000534341.1	protein_coding	85628602,85631687,85634086,85635667	85628688,85631808,85634279,85636536	Gene ID= ENSG00000171204.12 TPM= 1.17 Transcript Type= protein_coding
chr11	85647988	85656543	85647988	85656543	+	ENST00000304511.6@TMEM126A	ENST00000304511.6	protein_coding	85647988,85650249,85654063,85655594,85656309	85648089,85650341,85654256,85655708,85656543	Gene ID= ENSG00000171202.6 TPM= 5.25 Transcript Type= protein_coding
chr11	85647977	85656542	85647977	85656542	+	ENST00000528105.5@TMEM126A	ENST00000528105.5	protein_coding	85647977,85654063,85655594,85656309	85648089,85654256,85655708,85656542	Gene ID= ENSG00000171202.6 TPM= 1.75 Transcript Type= protein_coding
chr11	85659708	85665131	85659708	85665131	-	transcript6241.chr11.nnic@CREBZF	transcript6241.chr11.nnic	protein_coding	85663815,85663524,85663179,85659708	85665131,85663601,85663293,85662457	Gene ID= ENSG00000137504.13 TPM= 3.5 Transcript Type= NA
chr11	85657990	85665131	85657990	85665131	-	transcript6249.chr11.nic@CREBZF	transcript6249.chr11.nic	protein_coding	85663815,85663524,85657990	85665131,85663601,85662457	Gene ID= ENSG00000137504.13 TPM= 3.5 Transcript Type= NA
chr11	85661066	85665102	85661066	85665102	-	ENST00000527447.1@CREBZF	ENST00000527447.1	protein_coding	85661066	85665102	Gene ID= ENSG00000137504.13 TPM= 19.27 Transcript Type= protein_coding
chr11	85659708	85665102	85659708	85665102	-	ENST00000490820.2@CREBZF	ENST00000490820.2	protein_coding	85663524,85659708	85665102,85662457	Gene ID= ENSG00000137504.13 TPM= 12.26 Transcript Type= nonsense_mediated_decay
chr11	85660335	85665102	85660335	85665102	-	ENST00000525639.1@CREBZF	ENST00000525639.1	protein_coding	85663815,85663524,85662389,85660335	85665102,85663601,85662457,85661749	Gene ID= ENSG00000137504.13 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr11	85694288	85811189	85694288	85811189	-	transcript6289.chr11.nic@SYTL2	transcript6289.chr11.nic	protein_coding	85810954,85757625,85748272,85745637,85737575,85736501,85733939,85727896,85720858,85718790,85714413,85711113,85709331,85707429,85704858,85700515,85697979,85696183,85694288	85811189,85758114,85748423,85745772,85737656,85736612,85734742,85727967,85720959,85718843,85714507,85711232,85709500,85707531,85705028,85700593,85698078,85696388,85695340	Gene ID= ENSG00000137501.17 TPM= 4.09 Transcript Type= NA
chr11	85694288	85811189	85694288	85811189	-	transcript6293.chr11.nic@SYTL2	transcript6293.chr11.nic	protein_coding	85810954,85757625,85748272,85745637,85737575,85736501,85733939,85727896,85720858,85718790,85717483,85714413,85709331,85707429,85704858,85700515,85697979,85696183,85694288	85811189,85758114,85748423,85745772,85737656,85736615,85734742,85727967,85720959,85718843,85717530,85714507,85709500,85707531,85705028,85700593,85698078,85696388,85695340	Gene ID= ENSG00000137501.17 TPM= 3.5 Transcript Type= NA
chr11	85694224	85811159	85694224	85811159	-	ENST00000389960.8@SYTL2	ENST00000389960.8	protein_coding	85810954,85757625,85748272,85745637,85737575,85736501,85733939,85727896,85720858,85718790,85717483,85714413,85709331,85707429,85704858,85700515,85697979,85696183,85694224	85811159,85758114,85748423,85745772,85737656,85736612,85734742,85727967,85720959,85718843,85717530,85714507,85709500,85707531,85705028,85700593,85698078,85696388,85695340	Gene ID= ENSG00000137501.17 TPM= 1.75 Transcript Type= protein_coding
chr11	85694275	85811129	85694275	85811129	-	ENST00000316356.8@SYTL2	ENST00000316356.8	protein_coding	85810954,85757625,85748272,85745637,85737575,85736501,85733939,85727896,85720858,85718790,85714413,85711113,85709331,85707429,85704858,85700515,85697979,85696183,85694275	85811129,85758114,85748423,85745772,85737656,85736615,85734742,85727967,85720959,85718843,85714507,85711232,85709500,85707531,85705028,85700593,85698078,85696388,85695340	Gene ID= ENSG00000137501.17 TPM= 5.84 Transcript Type= protein_coding
chr11	85957175	86069060	85957175	86069060	-	transcript6302.chr11.nic@PICALM	transcript6302.chr11.nic	protein_coding	86068651,86031469,86026292,86022367,86014870,86012281,86011030,86007542,86003366,86001035,86000643,85996826,85990250,85983866,85981872,85981745,85981129,85978070,85976623,85974708,85957175	86069060,86031611,86026367,86022469,86014963,86012392,86011136,86007583,86003451,86001158,86000779,85996929,85990399,85983973,85982003,85981775,85981228,85978093,85976682,85974812,85959060	Gene ID= ENSG00000073921.17 TPM= 7.01 Transcript Type= NA
chr11	85957684	86069119	85957684	86069119	-	transcript6312.chr11.nic@PICALM	transcript6312.chr11.nic	protein_coding	86068651,86031469,86026292,86022367,86014870,86012281,86011030,86007542,86003366,86001035,86000643,85996826,85983866,85981872,85981745,85981129,85978070,85976623,85974708,85957684	86069119,86031611,86026367,86022469,86014963,86012392,86011136,86007583,86003451,86001158,86000779,85996929,85983973,85981988,85981775,85981228,85978093,85976682,85974812,85959060	Gene ID= ENSG00000073921.17 TPM= 39.93 Transcript Type= NA
chr11	85957684	86069059	85957684	86069059	-	ENST00000532317.5@PICALM	ENST00000532317.5	protein_coding	86068651,86031469,86026292,86022367,86014870,86012281,86011030,86007542,86003366,86001035,86000643,85996826,85983866,85981872,85981745,85981129,85978070,85976623,85974708,85957684	86069059,86031611,86026367,86022469,86014963,86012392,86011136,86007583,86003451,86001158,86000779,85996929,85983973,85982003,85981775,85981228,85978093,85976682,85974812,85959060	Gene ID= ENSG00000073921.17 TPM= 100.65 Transcript Type= protein_coding
chr11	86015669	86021509	86015669	86021509	+	transcript6329.chr11.nnic@NA	transcript6329.chr11.nnic	NA	86015669	86021509	Gene ID= novel_gene_chr11_6330 TPM= 3.5 Transcript Type= NA
chr11	86032498	86036955	86032498	86036955	+	transcript6325.chr11.nnic@NA	transcript6325.chr11.nnic	NA	86032498	86036955	Gene ID= novel_gene_chr11_6326 TPM= 5.84 Transcript Type= NA
chr11	86056547	86062529	86056547	86062529	+	transcript6331.chr11.nnic@NA	transcript6331.chr11.nnic	NA	86056547	86062529	Gene ID= novel_gene_chr11_6332 TPM= 4.67 Transcript Type= NA
chr11	86061054	86063886	86061054	86063886	+	transcript6327.chr11.nnic@NA	transcript6327.chr11.nnic	NA	86061054	86063886	Gene ID= novel_gene_chr11_6328 TPM= 5.84 Transcript Type= NA
chr11	86244544	86278736	86244544	86278736	+	ENST00000263360.10@EED	ENST00000263360.10	protein_coding	86244544,86250296,86252148,86255222,86256387,86257515,86264172,86266083,86268456,86276980,86277918,86278399	86245343,86250448,86252240,86255287,86256512,86257596,86264263,86266216,86268561,86277138,86277991,86278736	Gene ID= ENSG00000074266.19 TPM= 25.69 Transcript Type= protein_coding
chr11	86272059	86274797	86272059	86274797	-	transcript6343.chr11.nnic@NA	transcript6343.chr11.nnic	NA	86272059	86274797	Gene ID= novel_gene_chr11_6344 TPM= 3.5 Transcript Type= NA
chr11	86302223	86345931	86302223	86345931	+	ENST00000278483.7@HIKESHI	ENST00000278483.7	protein_coding	86302223,86306245,86337379,86344603,86345584	86302478,86306482,86337530,86344721,86345931	Gene ID= ENSG00000149196.15 TPM= 16.35 Transcript Type= protein_coding
chr11	86302211	86345638	86302211	86345638	+	ENST00000533986.5@HIKESHI	ENST00000533986.5	protein_coding	86302211,86306245,86337379,86344603	86302478,86306482,86337530,86345638	Gene ID= ENSG00000149196.15 TPM= 2.34 Transcript Type= protein_coding
chr11	86302243	86345791	86302243	86345791	+	ENST00000531485.5@HIKESHI	ENST00000531485.5	protein_coding	86302243,86337379,86344603,86345584	86302478,86337530,86344721,86345791	Gene ID= ENSG00000149196.15 TPM= 1.17 Transcript Type= processed_transcript
chr11	86395174	86423109	86395174	86423109	+	ENST00000528728.1@CCDC81	ENST00000528728.1	protein_coding	86395174,86397621,86400678,86407614,86409261,86412387,86414789,86415093,86419928,86422574	86395413,86397742,86400801,86407701,86409365,86412559,86414867,86415313,86420053,86423109	Gene ID= ENSG00000149201.9 TPM= 1.17 Transcript Type= protein_coding
chr11	86434924	86437282	86434924	86437282	-	ENST00000624124.1@AP001148.1	ENST00000624124.1	TEC	86434924	86437282	Gene ID= ENSG00000278989.1 TPM= 1.17 Transcript Type= TEC
chr11	86441194	86672404	86441194	86672404	-	transcript6364.chr11.nic@ME3	transcript6364.chr11.nic	protein_coding	86672274,86671762,86559690,86556553,86508792,86497963,86487337,86465091,86450301,86449889,86448150,86447065,86446314,86442821,86441194	86672404,86671958,86559823,86556702,86508867,86498124,86487440,86465200,86450398,86450002,86448255,86447207,86446487,86442919,86441440	Gene ID= ENSG00000151376.16 TPM= 2.34 Transcript Type= NA
chr11	86441110	86672636	86441110	86672636	-	ENST00000543262.5@ME3	ENST00000543262.5	protein_coding	86672324,86671762,86559690,86556553,86508792,86497963,86487337,86465091,86450301,86449889,86448150,86447065,86446314,86442821,86441110	86672636,86671958,86559823,86556702,86508867,86498124,86487440,86465200,86450398,86450002,86448255,86447207,86446487,86442919,86441440	Gene ID= ENSG00000151376.16 TPM= 4.09 Transcript Type= protein_coding
chr11	86441108	86672198	86441108	86672198	-	ENST00000393324.7@ME3	ENST00000393324.7	protein_coding	86671762,86559690,86556553,86508792,86497963,86487337,86465091,86450301,86449889,86448150,86447065,86446314,86442821,86441108	86672198,86559823,86556702,86508867,86498124,86487440,86465200,86450398,86450002,86448255,86447207,86446487,86442919,86441440	Gene ID= ENSG00000151376.16 TPM= 5.25 Transcript Type= protein_coding
chr11	86643997	86672175	86643997	86672175	-	transcript6370.chr11.nnic@ME3	transcript6370.chr11.nnic	protein_coding	86672120,86671762,86643997	86672175,86671958,86645945	Gene ID= ENSG00000151376.16 TPM= 3.5 Transcript Type= NA
chr11	86643997	86672404	86643997	86672404	-	transcript6371.chr11.nnic@ME3	transcript6371.chr11.nnic	protein_coding	86672274,86671762,86643997	86672404,86671958,86645945	Gene ID= ENSG00000151376.16 TPM= 2.34 Transcript Type= NA
chr11	86800521	86952788	86800521	86952788	+	ENST00000532234.5@PRSS23	ENST00000532234.5	protein_coding	86800521,86823377,86939020,86950356,86951216	86800651,86823593,86939126,86950499,86952788	Gene ID= ENSG00000150687.11 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr11	86800240	86811233	86800240	86811233	+	ENST00000280258.5@PRSS23	ENST00000280258.5	protein_coding	86800240,86807631	86800651,86811233	Gene ID= ENSG00000150687.11 TPM= 474.04 Transcript Type= protein_coding
chr11	86911219	86914059	86911219	86914059	+	transcript6388.chr11.nnic@NA	transcript6388.chr11.nnic	NA	86911219	86914059	Gene ID= novel_gene_chr11_6389 TPM= 5.84 Transcript Type= NA
chr11	86918875	86955400	86918875	86955400	-	transcript6383.chr11.nnic@FZD4	transcript6383.chr11.nnic	protein_coding	86954801,86918875	86955400,86922098	Gene ID= ENSG00000174804.3 TPM= 4.67 Transcript Type= NA
chr11	86945679	86955391	86945679	86955391	-	ENST00000531380.1@FZD4	ENST00000531380.1	protein_coding	86954801,86945679	86955391,86952470	Gene ID= ENSG00000174804.3 TPM= 164.63 Transcript Type= protein_coding
chr11	86935410	86939402	86935410	86939402	+	transcript6386.chr11.nnic@NA	transcript6386.chr11.nnic	NA	86935410	86939402	Gene ID= novel_gene_chr11_6387 TPM= 3.5 Transcript Type= NA
chr11	86953624	86955416	86953624	86955416	-	transcript6390.chr11.nnic@NA	transcript6390.chr11.nnic	NA	86953624	86955416	Gene ID= novel_gene_chr11_6391 TPM= 5.84 Transcript Type= NA
chr11	87037844	87323758	87037844	87323758	+	ENST00000340353.11@TMEM135	ENST00000340353.11	protein_coding	87037844,87067694,87071523,87091362,87236638,87295782,87302296,87305936,87309505,87313425,87314471,87318137,87319310,87321201	87038186,87067821,87071615,87091395,87236684,87295823,87302442,87306005,87309672,87313488,87314547,87318235,87319377,87323758	Gene ID= ENSG00000166575.16 TPM= 1.17 Transcript Type= protein_coding
chr11	87038007	87322350	87038007	87322350	+	ENST00000305494.5@TMEM135	ENST00000305494.5	protein_coding	87038007,87067694,87071523,87091362,87157341,87236638,87295782,87302296,87305936,87309505,87313425,87314471,87318137,87319310,87321201	87038186,87067821,87071615,87091395,87157406,87236684,87295823,87302442,87306005,87309672,87313488,87314547,87318235,87319377,87322350	Gene ID= ENSG00000166575.16 TPM= 1.17 Transcript Type= protein_coding
chr11	88113242	88175467	88113242	88175467	-	ENST00000243662.10@RAB38	ENST00000243662.10	protein_coding	88175183,88149675,88113242	88175467,88149955,88114140	Gene ID= ENSG00000123892.11 TPM= 12.84 Transcript Type= protein_coding
chr11	88293592	88337787	88293592	88337787	-	ENST00000227266.9@CTSC	ENST00000227266.9	protein_coding	88337501,88334937,88312388,88309163,88300530,88296133,88293592	88337787,88335082,88312554,88309318,88300645,88296264,88294508	Gene ID= ENSG00000109861.15 TPM= 107.42 Transcript Type= protein_coding
chr11	88320811	88337761	88320811	88337761	-	ENST00000524463.5@CTSC	ENST00000524463.5	protein_coding	88337501,88334937,88328112,88320811	88337761,88335082,88328196,88326443	Gene ID= ENSG00000109861.15 TPM= 3.5 Transcript Type= protein_coding
chr11	90201160	90223364	90201160	90223364	-	ENST00000320585.10@CHORDC1	ENST00000320585.10	protein_coding	90222891,90218135,90215174,90214018,90211215,90210536,90206202,90205460,90203308,90202813,90201160	90223364,90218184,90215230,90214175,90211318,90210594,90206272,90205565,90203427,90202875,90202551	Gene ID= ENSG00000110172.11 TPM= 1.17 Transcript Type= protein_coding
chr11	90216685	90216989	90216685	90216989	+	transcript6426.chr11.nnic@NA	transcript6426.chr11.nnic	NA	90216685	90216989	Gene ID= novel_gene_chr11_6427 TPM= 2.34 Transcript Type= NA
chr11	93144171	93197963	93144171	93197963	-	ENST00000326402.8@SLC36A4	ENST00000326402.8	protein_coding	93197778,93185691,93184430,93182806,93181691,93180797,93167944,93165918,93162706,93154108,93144171	93197963,93185814,93184520,93182894,93181786,93180881,93168171,93166016,93162875,93154277,93148844	Gene ID= ENSG00000180773.14 TPM= 3.5 Transcript Type= protein_coding
chr11	93478472	93543567	93478472	93543567	-	transcript6447.chr11.nnic@SMCO4	transcript6447.chr11.nnic	protein_coding	93543276,93499276,93479372,93478472	93543567,93499348,93479503,93479284	Gene ID= ENSG00000166002.6 TPM= 2.72 Transcript Type= NA
chr11	93478472	93537944	93478472	93537944	-	transcript6453.chr11.nic@SMCO4	transcript6453.chr11.nic	protein_coding	93537846,93499276,93478472	93537944,93499348,93479284	Gene ID= ENSG00000166002.6 TPM= 6.22 Transcript Type= NA
chr11	93478472	93543373	93478472	93543373	-	transcript6454.chr11.nic@SMCO4	transcript6454.chr11.nic	protein_coding	93543276,93499276,93478472	93543373,93499348,93479284	Gene ID= ENSG00000166002.6 TPM= 13.23 Transcript Type= NA
chr11	93730200	93741537	93730200	93741537	-	transcript6457.chr11.nic@TAF1D	transcript6457.chr11.nic	protein_coding	93741322,93739237,93738109,93737064,93736694,93736141,93734625,93733350,93733087,93732244,93731753,93731150,93730677,93730200	93741537,93739331,93738499,93737239,93736751,93736304,93734660,93733397,93733121,93732291,93731799,93731216,93730712,93730447	Gene ID= ENSG00000166012.16 TPM= 4.67 Transcript Type= NA
chr11	93730281	93741537	93730281	93741537	-	transcript6460.chr11.nic@TAF1D	transcript6460.chr11.nic	protein_coding	93741322,93739237,93738109,93736694,93736141,93734625,93733350,93733087,93732244,93731753,93731150,93730677,93730281	93741537,93739331,93738499,93737239,93736304,93734660,93733397,93733121,93732291,93731799,93731216,93730712,93730447	Gene ID= ENSG00000166012.16 TPM= 2.34 Transcript Type= NA
chr11	93735567	93741945	93735567	93741945	-	ENST00000448108.6@TAF1D	ENST00000448108.6	protein_coding	93741322,93739237,93738109,93737064,93736694,93735567	93741945,93739331,93738499,93737239,93736751,93736304	Gene ID= ENSG00000166012.16 TPM= 2.34 Transcript Type= protein_coding
chr11	93741575	93763083	93741575	93763083	+	transcript6472.chr11.nnic@C11orf54	transcript6472.chr11.nnic	protein_coding	93741575,93743018,93747297,93750346,93753682,93753936,93755210,93757316,93759742,93761515	93741728,93743765,93747448,93750444,93753755,93754037,93755386,93757465,93759858,93763083	Gene ID= ENSG00000182919.14 TPM= 2.72 Transcript Type= NA
chr11	93741655	93763083	93741655	93763083	+	transcript6475.chr11.nnic@C11orf54	transcript6475.chr11.nnic	protein_coding	93741655,93743018,93747297,93750346,93753682,93753936,93755210,93759742,93761515	93741728,93743307,93747448,93750444,93753755,93754037,93755386,93759858,93763083	Gene ID= ENSG00000182919.14 TPM= 2.34 Transcript Type= NA
chr11	93741591	93764749	93741591	93764749	+	ENST00000528288.5@C11orf54	ENST00000528288.5	protein_coding	93741591,93747297,93750346,93753682,93753936,93755210,93759742,93761515	93741728,93747448,93750444,93753755,93754037,93755386,93759858,93764749	Gene ID= ENSG00000182919.14 TPM= 1.17 Transcript Type= protein_coding
chr11	93741594	93763102	93741594	93763102	+	ENST00000617482.4@C11orf54	ENST00000617482.4	protein_coding	93741594,93747297,93750346,93753682,93753936,93757316,93759742,93761515	93741728,93747448,93750444,93753755,93754037,93757465,93759858,93763102	Gene ID= ENSG00000182919.14 TPM= 1.17 Transcript Type= protein_coding
chr11	93741594	93763102	93741594	93763102	+	ENST00000540113.5@C11orf54	ENST00000540113.5	protein_coding	93741594,93750346,93753682,93753936,93755210,93757316,93759742,93761515	93741728,93750444,93753755,93754037,93755386,93757465,93759858,93763102	Gene ID= ENSG00000182919.14 TPM= 1.17 Transcript Type= protein_coding
chr11	93741669	93762316	93741669	93762316	+	ENST00000354421.7@C11orf54	ENST00000354421.7	protein_coding	93741669,93747297,93750346,93753682,93753936,93755210,93757316,93759742,93761515	93741728,93747448,93750444,93753755,93754037,93755386,93757465,93759858,93762316	Gene ID= ENSG00000182919.14 TPM= 16.35 Transcript Type= protein_coding
chr11	93763478	93767004	93763478	93767004	+	transcript6490.chr11.nnic@NA	transcript6490.chr11.nnic	NA	93763478	93767004	Gene ID= novel_gene_chr11_6491 TPM= 4.67 Transcript Type= NA
chr11	93784227	93814963	93784227	93814963	+	ENST00000251871.8@MED17	ENST00000251871.8	protein_coding	93784227,93788001,93790574,93793728,93793951,93794908,93796410,93797535,93801835,93807518,93809717,93811853	93784763,93788167,93790793,93793864,93794035,93795060,93796540,93797719,93801972,93807635,93809876,93814963	Gene ID= ENSG00000042429.11 TPM= 35.03 Transcript Type= protein_coding
chr11	93784307	93812378	93784307	93812378	+	ENST00000639724.1@MED17	ENST00000639724.1	protein_coding	93784307,93788001,93790574,93793728,93793951,93794908,93796410,93797535,93801835,93807518,93811853	93784763,93788167,93790793,93793864,93794035,93795060,93796540,93797719,93801972,93807635,93812378	Gene ID= ENSG00000042429.11 TPM= 2.34 Transcript Type= protein_coding
chr11	94128929	94181966	94128929	94181966	+	ENST00000436171.2@PANX1	ENST00000436171.2	protein_coding	94128929,94153491,94178369,94179602,94180802	94129493,94153630,94178592,94180257,94181966	Gene ID= ENSG00000110218.8 TPM= 1.17 Transcript Type= protein_coding
chr11	94128928	94181972	94128928	94181972	+	ENST00000227638.7@PANX1	ENST00000227638.7	protein_coding	94128928,94153491,94178369,94179602,94180790	94129493,94153630,94178592,94180257,94181972	Gene ID= ENSG00000110218.8 TPM= 23.35 Transcript Type= protein_coding
chr11	94415578	94493908	94415578	94493908	-	ENST00000323929.7@MRE11	ENST00000323929.7	protein_coding	94493791,94492782,94490833,94485924,94479674,94478735,94476289,94471574,94470471,94467813,94464113,94460936,94459408,94456276,94447219,94445810,94437177,94435832,94429911,94415578	94493908,94492906,94490965,94486084,94479761,94478876,94476403,94471759,94470642,94467893,94464239,94461036,94459581,94456338,94447438,94445893,94437235,94435899,94429986,94420181	Gene ID= ENSG00000020922.12 TPM= 5.84 Transcript Type= protein_coding
chr11	94419866	94493857	94419866	94493857	-	transcript6517.chr11.nic@MRE11	transcript6517.chr11.nic	protein_coding	94493684,94492782,94490833,94485924,94479674,94478735,94476289,94471574,94470471,94467813,94464113,94460936,94459408,94456276,94447219,94445810,94437177,94435832,94429911,94419866	94493857,94492906,94490965,94486084,94479761,94478876,94476403,94471759,94470642,94467893,94464239,94461036,94459581,94456338,94447438,94445893,94437235,94435899,94429986,94420181	Gene ID= ENSG00000020922.12 TPM= 12.84 Transcript Type= NA
chr11	94419876	94493874	94419876	94493874	-	ENST00000323977.7@MRE11	ENST00000323977.7	protein_coding	94493684,94492782,94490833,94485924,94479674,94478735,94476289,94471574,94470471,94467813,94464113,94460936,94459408,94456276,94447219,94437177,94435832,94429911,94419876	94493874,94492906,94490965,94486084,94479761,94478876,94476403,94471759,94470642,94467893,94464239,94461036,94459581,94456338,94447438,94437235,94435899,94429986,94420181	Gene ID= ENSG00000020922.12 TPM= 1.17 Transcript Type= protein_coding
chr11	94493991	94499577	94493991	94499577	+	transcript6527.chr11.nic@ANKRD49	transcript6527.chr11.nic	protein_coding	94493991,94496604,94498071	94494035,94497964,94499577	Gene ID= ENSG00000168876.8 TPM= 3.5 Transcript Type= NA
chr11	94494008	94499577	94494008	94499577	+	ENST00000544253.1@ANKRD49	ENST00000544253.1	protein_coding	94494008,94496604	94494035,94499577	Gene ID= ENSG00000168876.8 TPM= 1.17 Transcript Type= protein_coding
chr11	94543840	94549898	94543840	94549898	+	ENST00000358752.3@FUT4	ENST00000358752.3	protein_coding	94543840	94549898	Gene ID= ENSG00000196371.3 TPM= 4.67 Transcript Type= protein_coding
chr11	94768371	94876753	94768371	94876753	+	ENST00000433060.2@AMOTL1	ENST00000433060.2	protein_coding	94768371,94795011,94799390,94821530,94830050,94831452,94850114,94853933,94859525,94864735,94865942,94869198,94870689	94768560,94795160,94800311,94821821,94830194,94831541,94850259,94854082,94859715,94864860,94866168,94869473,94876753	Gene ID= ENSG00000166025.17 TPM= 31.53 Transcript Type= protein_coding
chr11	94962622	94973612	94962622	94973612	-	ENST00000279839.7@CWC15	ENST00000279839.7	protein_coding	94973498,94972055,94971375,94970977,94969989,94966295,94962622	94973612,94972193,94971487,94971065,94970096,94966413,94963514	Gene ID= ENSG00000150316.11 TPM= 10.51 Transcript Type= protein_coding
chr11	94973681	94999518	94973681	94999518	+	ENST00000335080.5@KDM4D	ENST00000335080.5	protein_coding	94973681,94975654,94997024	94974068,94975748,94999518	Gene ID= ENSG00000186280.6 TPM= 2.34 Transcript Type= protein_coding
chr11	95067197	95071224	95067197	95071224	+	ENST00000587424.2@SRSF8	ENST00000587424.2	protein_coding	95067197	95071224	Gene ID= ENSG00000263465.4 TPM= 3.5 Transcript Type= protein_coding
chr11	95089810	95132645	95089810	95132645	+	ENST00000278505.4@ENDOD1	ENST00000278505.4	protein_coding	95089810,95128377	95090227,95132645	Gene ID= ENSG00000149218.4 TPM= 80.56 Transcript Type= protein_coding
chr11	95165513	95231197	95165513	95231197	-	ENST00000536441.6@SESN3	ENST00000536441.6	protein_coding	95230783,95193457,95191404,95189779,95185256,95184420,95178710,95177719,95175498,95165513	95231197,95193522,95191601,95189961,95185492,95184594,95178828,95177909,95175642,95173341	Gene ID= ENSG00000149212.11 TPM= 42.03 Transcript Type= protein_coding
chr11	95768953	95789811	95768953	95789811	-	transcript6574.chr11.nic@FAM76B	transcript6574.chr11.nic	protein_coding	95788499,95787624,95786119,95783065,95779879,95779607,95779078,95778822,95775922,95768953	95789811,95787678,95786274,95783264,95779926,95779687,95779135,95778957,95776023,95771650	Gene ID= ENSG00000077458.12 TPM= 2.72 Transcript Type= NA
chr11	95768953	95789811	95768953	95789811	-	transcript6580.chr11.nic@FAM76B	transcript6580.chr11.nic	protein_coding	95788499,95787624,95786119,95783065,95779879,95779607,95778822,95775922,95768953	95789811,95787678,95786274,95783264,95779926,95779687,95779135,95776023,95771650	Gene ID= ENSG00000077458.12 TPM= 3.89 Transcript Type= NA
chr11	95768953	95789817	95768953	95789817	-	transcript6581.chr11.nic@FAM76B	transcript6581.chr11.nic	protein_coding	95789392,95788499,95787624,95786119,95783065,95779879,95778822,95775922,95768953	95789817,95788563,95787678,95786274,95783264,95779926,95779687,95776023,95771650	Gene ID= ENSG00000077458.12 TPM= 3.89 Transcript Type= NA
chr11	95790461	95832693	95790461	95832693	+	ENST00000325542.9@CEP57	ENST00000325542.9	protein_coding	95790461,95799232,95812932,95813468,95817787,95818827,95821871,95822499,95827786,95829187,95831026	95790743,95799388,95813111,95813589,95817903,95818904,95821978,95822576,95828027,95829331,95832693	Gene ID= ENSG00000166037.10 TPM= 27.44 Transcript Type= protein_coding
chr11	95790461	95832691	95790461	95832691	+	ENST00000325486.9@CEP57	ENST00000325486.9	protein_coding	95790461,95799232,95812932,95813468,95817787,95818827,95821871,95827786,95829187,95831026	95790743,95799388,95813111,95813589,95817903,95818904,95821978,95828027,95829331,95832691	Gene ID= ENSG00000166037.10 TPM= 1.75 Transcript Type= protein_coding
chr11	95790533	95831543	95790533	95831543	+	ENST00000540830.5@CEP57	ENST00000540830.5	protein_coding	95790533,95799232,95812952,95813468,95817787,95818827,95821871,95822499,95827786,95829187,95831026	95790743,95799388,95813111,95813589,95817903,95818904,95821978,95822576,95828027,95829331,95831543	Gene ID= ENSG00000166037.10 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr11	95834089	95924108	95834089	95924108	-	transcript6605.chr11.nnic@MTMR2	transcript6605.chr11.nnic	protein_coding	95923875,95888156,95882374,95865601,95862272,95861992,95858531,95857552,95850600,95849674,95847714,95844953,95841617,95838094,95836148,95834089	95924108,95888261,95882496,95865676,95862366,95862102,95858632,95857635,95850749,95849862,95847899,95845159,95841709,95838207,95836324,95835451	Gene ID= ENSG00000087053.18 TPM= 2.63 Transcript Type= NA
chr11	95834089	95924108	95834089	95924108	-	transcript6606.chr11.nic@MTMR2	transcript6606.chr11.nic	protein_coding	95923875,95888156,95887612,95865601,95862272,95861992,95858531,95857552,95850600,95849674,95847714,95844953,95841617,95838094,95836148,95834089	95924108,95888261,95887684,95865676,95862366,95862102,95858632,95857635,95850749,95849862,95847899,95845159,95841709,95838207,95836324,95835451	Gene ID= ENSG00000087053.18 TPM= 4.96 Transcript Type= NA
chr11	95834089	95924100	95834089	95924100	-	ENST00000352297.11@MTMR2	ENST00000352297.11	protein_coding	95923875,95914242,95888156,95865601,95862272,95861992,95858531,95857552,95850600,95849674,95847714,95844953,95841617,95838094,95836148,95834089	95924100,95914312,95888261,95865676,95862366,95862102,95858632,95857635,95850749,95849862,95847899,95845159,95841709,95838207,95836324,95835451	Gene ID= ENSG00000087053.18 TPM= 27.15 Transcript Type= protein_coding
chr11	95834088	95924096	95834088	95924096	-	ENST00000409459.5@MTMR2	ENST00000409459.5	protein_coding	95923875,95914242,95888156,95887612,95865601,95862272,95861992,95858531,95857552,95850600,95849674,95847714,95844953,95841617,95838094,95836148,95834088	95924096,95914312,95888261,95887684,95865676,95862366,95862102,95858632,95857635,95850749,95849862,95847899,95845159,95841709,95838207,95836324,95835451	Gene ID= ENSG00000087053.18 TPM= 11.97 Transcript Type= protein_coding
chr11	95976598	96343180	95976598	96343180	-	ENST00000524717.5@MAML2	ENST00000524717.5	protein_coding	96341383,96091892,95991520,95985531,95976598	96343180,96093517,95991723,95985642,95979963	Gene ID= ENSG00000184384.13 TPM= 8.17 Transcript Type= protein_coding
chr11	96352769	96389924	96352769	96389924	-	transcript6618.chr11.nnic@CCDC82	transcript6618.chr11.nnic	protein_coding	96389844,96388695,96387530,96386254,96383962,96383269,96373375,96371013,96364980,96358993,96352769	96389924,96388829,96387613,96386293,96384761,96383473,96373467,96371137,96365150,96359178,96353714	Gene ID= ENSG00000149231.11 TPM= 7.01 Transcript Type= NA
chr11	96352769	96389948	96352769	96389948	-	transcript6620.chr11.nic@CCDC82	transcript6620.chr11.nic	protein_coding	96389844,96387530,96386254,96383962,96383269,96373375,96371013,96364980,96358993,96352769	96389948,96387613,96386293,96384761,96383473,96373467,96371137,96365150,96359178,96353714	Gene ID= ENSG00000149231.11 TPM= 35.03 Transcript Type= NA
chr11	96353224	96389818	96353224	96389818	-	transcript6622.chr11.nnic@CCDC82	transcript6622.chr11.nnic	protein_coding	96389365,96387530,96386254,96383962,96383269,96373375,96371013,96364980,96358993,96353224	96389818,96387613,96386293,96384761,96383473,96373467,96371137,96365150,96359178,96353714	Gene ID= ENSG00000149231.11 TPM= 2.34 Transcript Type= NA
chr11	96389994	96393257	96389994	96393257	+	ENST00000332349.4@JRKL	ENST00000332349.4	protein_coding	96389994,96390483	96390073,96393257	Gene ID= ENSG00000183340.6 TPM= 5.84 Transcript Type= protein_coding
chr11	101029624	101130524	101029624	101130524	-	ENST00000325455.9@PGR	ENST00000325455.9	protein_coding	101127434,101126007,101091760,101062447,101051424,101049929,101041945,101029624	101130524,101126158,101091876,101062752,101051568,101050059,101042102,101039271	Gene ID= ENSG00000082175.14 TPM= 1.17 Transcript Type= protein_coding
chr11	101451923	101583906	101451923	101583906	-	transcript6649.chr11.nnic@TRPC6	transcript6649.chr11.nnic	protein_coding	101583175,101504024,101491556,101488937,101482949,101476301,101473509,101472137,101471183,101469427,101455018,101453650,101451923	101583906,101504798,101491738,101489101,101483165,101476534,101473773,101472332,101471386,101469501,101455101,101453725,101453106	Gene ID= ENSG00000137672.12 TPM= 2.34 Transcript Type= NA
chr11	101451564	101583928	101451564	101583928	-	ENST00000344327.7@TRPC6	ENST00000344327.7	protein_coding	101583334,101504024,101491556,101488937,101482949,101476301,101473509,101472137,101471183,101469427,101455018,101453650,101451564	101583928,101504798,101491738,101489101,101483165,101476534,101473773,101472332,101471386,101469501,101455101,101453725,101453106	Gene ID= ENSG00000137672.12 TPM= 8.17 Transcript Type= protein_coding
chr11	101915015	102001058	101915015	102001058	+	ENST00000263468.12@CEP126	ENST00000263468.12	protein_coding	101915015,101922641,101944265,101948031,101958168,101961741,101978347,101981889,101986832,101992778,101997599	101915412,101922760,101944410,101948142,101958366,101963880,101978459,101981964,101987041,101992842,102001058	Gene ID= ENSG00000110318.13 TPM= 1.17 Transcript Type= protein_coding
chr11	102047468	102083419	102047468	102083419	+	ENST00000530659.1@C11orf70	ENST00000530659.1	protein_coding	102047468,102058880,102066485,102075873,102081215,102083071	102047896,102058955,102066651,102076045,102081281,102083419	Gene ID= ENSG00000137691.12 TPM= 1.17 Transcript Type= retained_intron
chr11	102047455	102081435	102047455	102081435	+	ENST00000526781.5@C11orf70	ENST00000526781.5	protein_coding	102047455,102047815,102058880,102066485,102075873,102081215	102047580,102047896,102058955,102066651,102076045,102081435	Gene ID= ENSG00000137691.12 TPM= 1.17 Transcript Type= protein_coding
chr11	102110461	102233423	102110461	102233423	+	ENST00000282441.9@YAP1	ENST00000282441.9	protein_coding	102110461,102114144,102162456,102186018,102205893,102209517,102223622,102227469,102229702	102111169,102114394,102162571,102186131,102206074,102209564,102223752,102227581,102233423	Gene ID= ENSG00000137693.13 TPM= 32.69 Transcript Type= protein_coding
chr11	102112406	102115563	102112406	102115563	-	transcript6703.chr11.nnic@NA	transcript6703.chr11.nnic	NA	102112406	102115563	Gene ID= novel_gene_chr11_6704 TPM= 17.51 Transcript Type= NA
chr11	102317485	102337734	102317485	102337734	+	transcript6706.chr11.nnic@BIRC3	transcript6706.chr11.nnic	protein_coding	102317485,102325466,102328052,102328897,102330999,102335966,102336760,102336909	102317571,102325565,102328130,102328945,102331241,102336220,102336801,102337734	Gene ID= ENSG00000023445.13 TPM= 2.34 Transcript Type= NA
chr11	102317483	102322803	102317483	102322803	+	transcript6708.chr11.nic@BIRC3	transcript6708.chr11.nic	protein_coding	102317483,102321837	102317571,102322803	Gene ID= ENSG00000023445.13 TPM= 28.02 Transcript Type= NA
chr11	102317495	102337734	102317495	102337734	+	ENST00000263464.7@BIRC3	ENST00000263464.7	protein_coding	102317495,102321837,102325466,102328052,102328897,102330999,102335966,102336760,102336909	102317571,102325362,102325565,102328130,102328945,102331241,102336220,102336801,102337734	Gene ID= ENSG00000023445.13 TPM= 2.34 Transcript Type= protein_coding
chr11	102346408	102347037	102346408	102347037	-	transcript6709.chr11.nnic@NA	transcript6709.chr11.nnic	NA	102346408	102347037	Gene ID= novel_gene_chr11_6710 TPM= 3.5 Transcript Type= NA
chr11	102347374	102378670	102347374	102378670	+	ENST00000527910.5@BIRC2	ENST00000527910.5	protein_coding	102347374,102348598,102350844,102362896,102363668,102368306,102377496,102377857,102377990	102347845,102350749,102350943,102362974,102363716,102368548,102377750,102377898,102378670	Gene ID= ENSG00000110330.8 TPM= 1.17 Transcript Type= processed_transcript
chr11	102347217	102378669	102347217	102378669	+	transcript6718.chr11.nic@BIRC2	transcript6718.chr11.nic	protein_coding	102347217,102348598,102362896,102363668,102368306,102377496,102377857,102377990	102347376,102350943,102362974,102363716,102368548,102377750,102377898,102378669	Gene ID= ENSG00000110330.8 TPM= 9.34 Transcript Type= NA
chr11	102347235	102378670	102347235	102378670	+	ENST00000227758.6@BIRC2	ENST00000227758.6	protein_coding	102347235,102348598,102350844,102362896,102363668,102368306,102377496,102377857,102377990	102347376,102350749,102350943,102362974,102363716,102368548,102377750,102377898,102378670	Gene ID= ENSG00000110330.8 TPM= 108.59 Transcript Type= protein_coding
chr11	102347247	102378669	102347247	102378669	+	ENST00000532672.5@BIRC2	ENST00000532672.5	protein_coding	102347247,102348598,102349878,102350844,102362896,102363668,102368306,102377496,102377857,102377990	102347376,102348764,102350749,102350943,102362974,102363716,102368548,102377750,102377898,102378669	Gene ID= ENSG00000110330.8 TPM= 1.55 Transcript Type= protein_coding
chr11	102347374	102378663	102347374	102378663	+	ENST00000613397.4@BIRC2	ENST00000613397.4	protein_coding	102347374,102348598,102350844,102362896,102363668,102368306,102377496,102377857,102377990	102347845,102350749,102350943,102362974,102363716,102368548,102377750,102377898,102378663	Gene ID= ENSG00000110330.8 TPM= 2.72 Transcript Type= protein_coding
chr11	102396336	102453044	102396336	102453044	-	ENST00000398136.6@TMEM123	ENST00000398136.6	protein_coding	102452524,102448812,102401916,102401539,102396336	102453044,102448868,102402206,102401692,102398891	Gene ID= ENSG00000152558.14 TPM= 420.33 Transcript Type= protein_coding
chr11	102520508	102530753	102520508	102530753	-	ENST00000260227.4@MMP7	ENST00000260227.4	protein_coding	102530593,102527757,102527524,102524936,102523240,102520508	102530753,102527983,102527672,102525064,102523401,102520804	Gene ID= ENSG00000137673.8 TPM= 7.01 Transcript Type= protein_coding
chr11	102789920	102798160	102789920	102798160	-	ENST00000315274.6@MMP1	ENST00000315274.6	protein_coding	102797988,102797256,102797014,102796664,102795452,102795174,102792605,102791333,102790703,102789920	102798160,102797500,102797162,102796789,102795607,102795291,102792738,102791495,102790806,102790521	Gene ID= ENSG00000196611.4 TPM= 24.52 Transcript Type= protein_coding
chr11	102862736	102875034	102862736	102875034	-	ENST00000571244.2@MMP12	ENST00000571244.2	protein_coding	102874836,102872865,102871804,102871594,102867908,102867270,102866315,102865776,102864146,102862736	102875034,102873112,102871952,102871719,102868069,102867393,102866448,102865935,102864252,102863200	Gene ID= ENSG00000262406.2 TPM= 1.17 Transcript Type= protein_coding
chr11	103062079	103092215	103062079	103092215	-	ENST00000260247.9@DCUN1D5	ENST00000260247.9	protein_coding	103091787,103089227,103083256,103082748,103066459,103066269,103064275,103062079	103092215,103089318,103083326,103082839,103066567,103066373,103064377,103062414	Gene ID= ENSG00000137692.11 TPM= 21.02 Transcript Type= protein_coding
chr11	103080646	103092185	103080646	103092185	-	transcript6740.chr11.nnic@DCUN1D5	transcript6740.chr11.nnic	protein_coding	103091787,103089227,103083256,103082748,103080646	103092185,103089318,103083326,103082839,103081004	Gene ID= ENSG00000137692.11 TPM= 2.34 Transcript Type= NA
chr11	103907189	104164379	103907189	104164379	-	ENST00000302251.9@PDGFD	ENST00000302251.9	protein_coding	104163804,104000051,103996065,103947662,103943452,103926912,103907189	104164379,104000237,103996245,103947724,103943650,103927126,103909819	Gene ID= ENSG00000170962.12 TPM= 3.5 Transcript Type= protein_coding
chr11	103907186	104164107	103907186	104164107	-	ENST00000393158.6@PDGFD	ENST00000393158.6	protein_coding	104163804,104000051,103996065,103947662,103943452,103926912,103907186	104164107,104000255,103996245,103947724,103943650,103927126,103909819	Gene ID= ENSG00000170962.12 TPM= 4.67 Transcript Type= protein_coding
chr11	104885718	104898670	104885718	104898670	-	ENST00000422698.6@CASP12	ENST00000422698.6	polymorphic_pseudogene	104898408,104897217,104892391,104892331,104891170,104890374,104887196,104886693,104885718	104898670,104897468,104892503,104892387,104891404,104890523,104887305,104886812,104886102	Gene ID= ENSG00000204403.9 TPM= 1.17 Transcript Type= protein_coding
chr11	104950396	104968581	104950396	104968581	-	transcript6755.chr11.nic@CASP4	transcript6755.chr11.nic	protein_coding	104968519,104950396	104968581,104955001	Gene ID= ENSG00000196954.13 TPM= 7.01 Transcript Type= NA
chr11	104994277	105023167	104994277	105023167	-	ENST00000444749.6@CASP5	ENST00000444749.6	protein_coding	105023130,105007083,105003274,105002028,105000261,104998885,104997383,104995740,104994277	105023167,105007334,105003383,105002201,105000495,104999028,104997492,104995842,104994347	Gene ID= ENSG00000137757.10 TPM= 1.17 Transcript Type= protein_coding
chr11	105025508	105035147	105025508	105035147	-	transcript6758.chr11.nic@CASP1	transcript6758.chr11.nic	protein_coding	105035107,105034208,105033064,105031165,105030330,105029665,105029124,105026842,105026226,105025508	105035147,105034388,105033126,105031280,105030503,105029899,105029267,105026951,105026356,105025600	Gene ID= ENSG00000137752.23 TPM= 9.63 Transcript Type= NA
chr11	105025508	105034840	105025508	105034840	-	transcript6759.chr11.nnic@CASP1	transcript6759.chr11.nnic	protein_coding	105034686,105034208,105033064,105031165,105030330,105029665,105029124,105026842,105026226,105025508	105034840,105034474,105033126,105031280,105030503,105029899,105029267,105026951,105026356,105025600	Gene ID= ENSG00000137752.23 TPM= 3.79 Transcript Type= NA
chr11	105025508	105035250	105025508	105035250	-	ENST00000436863.7@CASP1	ENST00000436863.7	protein_coding	105035107,105034208,105033064,105031165,105030330,105029665,105029124,105026842,105026226,105025508	105035250,105034474,105033126,105031280,105030503,105029899,105029267,105026951,105026356,105025600	Gene ID= ENSG00000137752.23 TPM= 22.48 Transcript Type= protein_coding
chr11	105025508	105034840	105025508	105034840	-	transcript6761.chr11.nic@CASP1	transcript6761.chr11.nic	protein_coding	105034208,105033064,105031165,105030330,105029665,105029124,105026842,105026226,105025508	105034840,105033126,105031280,105030503,105029899,105029267,105026951,105026356,105025600	Gene ID= ENSG00000137752.23 TPM= 7.3 Transcript Type= NA
chr11	105025508	105035149	105025508	105035149	-	transcript6762.chr11.nic@CASP1	transcript6762.chr11.nic	protein_coding	105035107,105034208,105031165,105030330,105029665,105029124,105026842,105026226,105025508	105035149,105034474,105031280,105030503,105029899,105029267,105026951,105026356,105025600	Gene ID= ENSG00000137752.23 TPM= 3.5 Transcript Type= NA
chr11	105025508	105035149	105025508	105035149	-	transcript6763.chr11.nic@CASP1	transcript6763.chr11.nic	protein_coding	105035107,105034208,105033064,105030330,105029665,105029124,105026842,105026226,105025508	105035149,105034474,105033126,105031280,105029899,105029267,105026951,105026356,105025600	Gene ID= ENSG00000137752.23 TPM= 2.34 Transcript Type= NA
chr11	105025508	105035147	105025508	105035147	-	transcript6764.chr11.nic@CASP1	transcript6764.chr11.nic	protein_coding	105035107,105034208,105033064,105031165,105030330,105029665,105029124,105026842,105025508	105035147,105034388,105033126,105031280,105030503,105029899,105029267,105026951,105026356	Gene ID= ENSG00000137752.23 TPM= 2.34 Transcript Type= NA
chr11	105025508	105035149	105025508	105035149	-	ENST00000533400.5@CASP1	ENST00000533400.5	protein_coding	105035107,105034208,105033064,105031165,105030330,105029665,105029124,105026842,105025508	105035149,105034474,105033126,105031280,105030503,105029899,105029267,105026951,105026356	Gene ID= ENSG00000137752.23 TPM= 35.03 Transcript Type= protein_coding
chr11	105025508	105034840	105025508	105034840	-	transcript6769.chr11.nic@CASP1	transcript6769.chr11.nic	protein_coding	105034208,105033064,105031165,105030330,105029665,105029124,105026842,105025508	105034840,105033126,105031280,105030503,105029899,105029267,105026951,105026356	Gene ID= ENSG00000137752.23 TPM= 5.84 Transcript Type= NA
chr11	105041523	105045376	105041523	105045376	-	ENST00000375704.7@CARD16	ENST00000375704.7	protein_coding	105045291,105044392,105043483,105041523	105045376,105044658,105043545,105041719	Gene ID= ENSG00000204397.7 TPM= 17.51 Transcript Type= protein_coding
chr11	106007902	106022229	106007902	106022229	-	transcript6786.chr11.nic@MSANTD4	transcript6786.chr11.nic	protein_coding	106021836,106010456,106007902	106022229,106011067,106010110	Gene ID= ENSG00000170903.10 TPM= 5.84 Transcript Type= NA
chr11	106007902	106022227	106007902	106022227	-	ENST00000301919.8@MSANTD4	ENST00000301919.8	protein_coding	106020962,106010456,106007902	106022227,106011067,106010110	Gene ID= ENSG00000170903.10 TPM= 7.01 Transcript Type= protein_coding
chr11	106052674	106077765	106052674	106077765	-	ENST00000531837.1@KBTBD3	ENST00000531837.1	protein_coding	106077312,106076507,106058865,106052674	106077765,106076707,106059109,106054455	Gene ID= ENSG00000182359.14 TPM= 1.17 Transcript Type= protein_coding
chr11	106051098	106077459	106051098	106077459	-	ENST00000526793.5@KBTBD3	ENST00000526793.5	protein_coding	106077312,106058865,106051098	106077459,106059109,106054455	Gene ID= ENSG00000182359.14 TPM= 1.17 Transcript Type= protein_coding
chr11	106077489	106098710	106077489	106098710	+	ENST00000278618.8@AASDHPPT	ENST00000278618.8	protein_coding	106077489,106079467,106090557,106091316,106094583,106096743	106077893,106079692,106090678,106091477,106094654,106098710	Gene ID= ENSG00000149313.10 TPM= 105.08 Transcript Type= protein_coding
chr11	107319233	107321329	107319233	107321329	-	transcript6807.chr11.nnic@NA	transcript6807.chr11.nnic	NA	107319233	107321329	Gene ID= novel_gene_chr11_6808 TPM= 2.34 Transcript Type= NA
chr11	107326345	107457844	107326345	107457844	-	ENST00000282251.9@CWF19L2	ENST00000282251.9	protein_coding	107457712,107455666,107454450,107442939,107441503,107439090,107433634,107428799,107418194,107416209,107392779,107390074,107353524,107348937,107336558,107334881,107329918,107326345	107457844,107455776,107454572,107443049,107441622,107439183,107433749,107429451,107418287,107416298,107392895,107390211,107353736,107349053,107336713,107334961,107330019,107327053	Gene ID= ENSG00000152404.15 TPM= 28.02 Transcript Type= protein_coding
chr11	107502726	107565746	107502726	107565746	-	ENST00000428149.6@ALKBH8	ENST00000428149.6	protein_coding	107565601,107560765,107556766,107553847,107553108,107551808,107549753,107532300,107525441,107522299,107510887,107502726	107565746,107560899,107557003,107553978,107553203,107551912,107549823,107532406,107525592,107522555,107511036,107505215	Gene ID= ENSG00000137760.14 TPM= 7.01 Transcript Type= protein_coding
chr11	107591230	107666779	107591230	107666779	+	ENST00000265840.11@ELMOD1	ENST00000265840.11	protein_coding	107591230,107618105,107630417,107630700,107631580,107635636,107647468,107650335,107650885,107654172,107655933,107665025	107591409,107618206,107630562,107630728,107631677,107635765,107647601,107650403,107650908,107654222,107656066,107666779	Gene ID= ENSG00000110675.12 TPM= 4.67 Transcript Type= protein_coding
chr11	107790991	107859188	107790991	107859188	-	ENST00000525815.5@SLC35F2	ENST00000525815.5	protein_coding	107858658,107815790,107811667,107806717,107805359,107804718,107803001,107790991	107859188,107815965,107811794,107806876,107805515,107804770,107803155,107792800	Gene ID= ENSG00000110660.14 TPM= 18.68 Transcript Type= protein_coding
chr11	107790991	107859184	107790991	107859184	-	transcript6822.chr11.nnic@SLC35F2	transcript6822.chr11.nnic	protein_coding	107858658,107815790,107811667,107806717,107803001,107790991	107859184,107815965,107811794,107806876,107803155,107792800	Gene ID= ENSG00000110660.14 TPM= 3.5 Transcript Type= NA
chr11	108008733	108107776	108008733	108107776	+	ENST00000393094.6@CUL5	ENST00000393094.6	protein_coding	108008733,108033802,108046270,108049890,108052660,108054647,108054875,108070096,108072332,108073390,108078176,108088527,108089492,108094391,108094812,108095530,108097636,108098406,108104190	108009372,108033911,108046369,108050066,108052801,108054792,108054955,108070189,108072462,108073497,108078240,108088659,108089623,108094514,108094987,108095691,108097754,108098529,108107776	Gene ID= ENSG00000166266.13 TPM= 8.17 Transcript Type= protein_coding
chr11	108472105	108498530	108472105	108498530	-	transcript6845.chr11.nic@KDELC2	transcript6845.chr11.nic	protein_coding	108498165,108490970,108486157,108482006,108481180,108477607,108472105	108498530,108491167,108486440,108482222,108481376,108477711,108474952	Gene ID= ENSG00000178202.12 TPM= 4.67 Transcript Type= NA
chr11	108472105	108498432	108472105	108498432	-	ENST00000323468.9@KDELC2	ENST00000323468.9	protein_coding	108498165,108490970,108486157,108482006,108481180,108479301,108477607,108472105	108498432,108491167,108486440,108482222,108481376,108479495,108477711,108474952	Gene ID= ENSG00000178202.12 TPM= 15.18 Transcript Type= protein_coding
chr11	108505431	108593647	108505431	108593647	-	ENST00000265843.8@EXPH5	ENST00000265843.8	protein_coding	108593418,108541652,108539024,108528136,108518235,108505431	108593647,108541812,108539186,108528184,108518373,108514875	Gene ID= ENSG00000110723.11 TPM= 18.68 Transcript Type= protein_coding
chr11	108665025	108940930	108665025	108940930	+	ENST00000322536.7@DDX10	ENST00000322536.7	protein_coding	108665025,108673467,108675596,108677085,108678315,108679371,108688936,108691876,108693516,108706739,108715879,108719797,108722997,108838446,108841315,108852153,108917873,108940246	108665339,108673527,108675726,108677243,108678435,108679560,108689062,108692038,108693600,108706837,108715966,108719885,108723462,108838565,108841476,108852209,108918018,108940930	Gene ID= ENSG00000178105.9 TPM= 50.21 Transcript Type= protein_coding
chr11	110247810	110296980	110247810	110296980	-	transcript6865.chr11.nic@RDX	transcript6865.chr11.nic	protein_coding	110296467,110279681,110272536,110264779,110263960,110258106,110257767,110255289,110253946,110247810	110296980,110279756,110272619,110264874,110264234,110258189,110257913,110255385,110254109,110247833	Gene ID= ENSG00000137710.14 TPM= 16.93 Transcript Type= NA
chr11	110229450	110296722	110229450	110296722	-	ENST00000343115.8@RDX	ENST00000343115.8	protein_coding	110296467,110279681,110272536,110264779,110263960,110258106,110257767,110255289,110253946,110247703,110237492,110236099,110233237,110229450	110296722,110279756,110272619,110264874,110264234,110258189,110257913,110255385,110254109,110247833,110237652,110236191,110233479,110232033	Gene ID= ENSG00000137710.14 TPM= 145.95 Transcript Type= protein_coding
chr11	110429883	110464881	110429883	110464881	+	ENST00000260270.2@FDX1	ENST00000260270.2	protein_coding	110429883,110435834,110456918,110462354	110430305,110435958,110457047,110464881	Gene ID= ENSG00000137714.2 TPM= 24.52 Transcript Type= protein_coding
chr11	110577042	110712437	110577042	110712437	-	transcript6880.chr11.nic@ARHGAP20	transcript6880.chr11.nic	protein_coding	110712127,110690547,110630628,110624162,110615553,110614561,110611309,110608984,110606561,110591977,110590648,110586216,110583548,110582321,110577042	110712437,110690629,110630792,110624311,110615594,110614645,110611386,110609050,110606749,110592155,110590809,110586325,110583737,110582435,110581225	Gene ID= ENSG00000137727.12 TPM= 5.84 Transcript Type= NA
chr11	111352252	111359205	111352252	111359205	-	transcript6892.chr11.nic@POU2AF1	transcript6892.chr11.nic	protein_coding	111358788,111357795,111357445,111352252	111359205,111357837,111357710,111354575	Gene ID= ENSG00000110777.11 TPM= 2.34 Transcript Type= NA
chr11	111540659	111560960	111540659	111560960	+	ENST00000375615.7@LAYN	ENST00000375615.7	protein_coding	111540659,111541562,111543923,111549618,111554561,111555207,111557541,111560095	111540928,111541585,111544220,111549775,111554593,111555290,111557643,111560960	Gene ID= ENSG00000204381.11 TPM= 15.18 Transcript Type= protein_coding
chr11	111540508	111561063	111540508	111561063	+	ENST00000375614.6@LAYN	ENST00000375614.6	protein_coding	111540508,111543923,111549618,111554561,111555207,111557541,111560095	111540928,111544220,111549775,111554593,111555290,111557643,111561063	Gene ID= ENSG00000204381.11 TPM= 4.67 Transcript Type= protein_coding
chr11	111541339	111560960	111541339	111560960	+	transcript6899.chr11.nic@LAYN	transcript6899.chr11.nic	protein_coding	111541339,111543923,111549618,111554561,111555207,111557541,111560095	111541585,111544220,111549775,111554593,111555290,111557643,111560960	Gene ID= ENSG00000204381.11 TPM= 5.84 Transcript Type= NA
chr11	111540508	111561745	111540508	111561745	+	ENST00000436913.6@LAYN	ENST00000436913.6	protein_coding	111540508,111543923,111554561,111555207,111557541,111560095	111540928,111544220,111554593,111555290,111557643,111561745	Gene ID= ENSG00000204381.11 TPM= 1.17 Transcript Type= protein_coding
chr11	111540730	111560918	111540730	111560918	+	ENST00000533265.5@LAYN	ENST00000533265.5	protein_coding	111540730,111543923,111549618,111554561,111555207,111557541,111560095	111540928,111544220,111549775,111554593,111555290,111557647,111560918	Gene ID= ENSG00000204381.11 TPM= 10.51 Transcript Type= protein_coding
chr11	111602391	111730853	111602391	111730853	+	ENST00000304987.3@SIK2	ENST00000304987.3	protein_coding	111602391,111616243,111620339,111688001,111700886,111701452,111703203,111704987,111712211,111719775,111720478,111720899,111721830,111722665,111723496	111602698,111616359,111620402,111688162,111701010,111701575,111703423,111705139,111712375,111720003,111720762,111721062,111721940,111722756,111730853	Gene ID= ENSG00000170145.4 TPM= 16.35 Transcript Type= protein_coding
chr11	111602392	111692388	111602392	111692388	+	transcript6916.chr11.nic@SIK2	transcript6916.chr11.nic	protein_coding	111602392,111616243,111620339,111688001	111602698,111616359,111620402,111692388	Gene ID= ENSG00000170145.4 TPM= 3.5 Transcript Type= NA
chr11	111622424	111626720	111622424	111626720	+	transcript6919.chr11.nnic@NA	transcript6919.chr11.nnic	NA	111622424	111626720	Gene ID= novel_gene_chr11_6920 TPM= 3.5 Transcript Type= NA
chr11	111726908	111766382	111726908	111766382	-	ENST00000311129.9@PPP2R1B	ENST00000311129.9	protein_coding	111766248,111765294,111764805,111760819,111759804,111755295,111754980,111754499,111753443,111752159,111747954,111743376,111742523,111742053,111737448,111726908	111766382,111765384,111764905,111761051,111759951,111755450,111755094,111754569,111753577,111752332,111748014,111743530,111742665,111742144,111737569,111727057	Gene ID= ENSG00000137713.15 TPM= 2.34 Transcript Type= protein_coding
chr11	111786284	111871325	111786284	111871325	-	transcript6921.chr11.nic@ALG9	transcript6921.chr11.nic	protein_coding	111870941,111870232,111868602,111865181,111860547,111857602,111853649,111853380,111844601,111840655,111838249,111837468,111836165,111809643,111786284	111871325,111870370,111868736,111865251,111860635,111857737,111853736,111853485,111844723,111840809,111838378,111837615,111836294,111809773,111786520	Gene ID= ENSG00000086848.14 TPM= 2.63 Transcript Type= NA
chr11	111786256	111871533	111786256	111871533	-	ENST00000614444.4@ALG9	ENST00000614444.4	protein_coding	111871352,111870232,111868602,111865181,111860547,111857602,111853649,111853380,111844601,111840655,111838249,111837468,111836165,111809643,111786256	111871533,111870370,111868736,111865251,111860635,111857737,111853736,111853485,111844723,111840809,111838378,111837615,111836294,111809773,111786520	Gene ID= ENSG00000086848.14 TPM= 3.79 Transcript Type= protein_coding
chr11	111786284	111871581	111786284	111871581	-	ENST00000616540.4@ALG9	ENST00000616540.4	protein_coding	111871352,111870232,111868602,111865181,111860547,111857602,111853649,111853380,111844601,111840655,111838249,111837468,111836165,111809643,111786284	111871581,111870370,111868736,111865251,111860635,111857737,111853736,111853485,111844723,111840809,111838399,111837615,111836294,111809773,111786520	Gene ID= ENSG00000086848.14 TPM= 3.79 Transcript Type= protein_coding
chr11	111786284	111871301	111786284	111871301	-	ENST00000398006.6@ALG9	ENST00000398006.6	protein_coding	111870775,111870232,111868602,111865181,111860547,111857602,111853649,111853380,111844601,111840655,111838249,111837468,111836165,111809643,111786284	111871301,111870370,111868736,111865251,111860635,111857737,111853736,111853485,111844723,111840809,111838378,111837615,111836294,111809773,111786520	Gene ID= ENSG00000086848.14 TPM= 2.63 Transcript Type= protein_coding
chr11	111874056	111879180	111874056	111879180	-	ENST00000260257.8@FDXACB1	ENST00000260257.8	protein_coding	111878961,111878556,111876808,111876481,111874056	111879180,111878712,111877011,111876639,111876104	Gene ID= ENSG00000255561.6 TPM= 2.34 Transcript Type= protein_coding
chr11	111879224	111885975	111879224	111885975	+	ENST00000260276.7@C11orf1	ENST00000260276.7	protein_coding	111879224,111882368,111883136,111883771	111879605,111882598,111883202,111885975	Gene ID= ENSG00000137720.7 TPM= 4.67 Transcript Type= protein_coding
chr11	111908622	111913213	111908622	111913213	-	ENST00000616970.4@CRYAB	ENST00000616970.4	protein_coding	111913105,111911524,111910327,111908622	111913213,111911922,111910449,111908967	Gene ID= ENSG00000109846.7 TPM= 35.41 Transcript Type= protein_coding
chr11	111908623	111913186	111908623	111913186	-	transcript6941.chr11.nic@CRYAB	transcript6941.chr11.nic	protein_coding	111913139,111911524,111910327,111908623	111913186,111911922,111910449,111908967	Gene ID= ENSG00000109846.7 TPM= 23.74 Transcript Type= NA
chr11	111908620	111910893	111908620	111910893	-	ENST00000525823.1@CRYAB	ENST00000525823.1	protein_coding	111910327,111908620	111910893,111908967	Gene ID= ENSG00000109846.7 TPM= 5.06 Transcript Type= protein_coding
chr11	111912242	111914093	111912242	111914093	+	ENST00000304298.3@HSPB2	ENST00000304298.3	protein_coding	111912242,111913441	111912923,111914093	Gene ID= ENSG00000170276.5 TPM= 18.68 Transcript Type= protein_coding
chr11	111977309	112021979	111977309	112021979	+	ENST00000615255.1@DIXDC1	ENST00000615255.1	protein_coding	111977309,111980737,111982339,111985232,111986871,111989005,111992415,111992951,111993496,111993669,111995019,111995403,111996080,112016691,112017777,112018956	111977794,111980849,111982487,111985321,111986924,111989055,111992519,111993004,111993588,111993740,111995108,111995564,111996146,112016796,112017885,112021979	Gene ID= ENSG00000150764.13 TPM= 3.5 Transcript Type= protein_coding
chr11	112024814	112064390	112024814	112064390	+	ENST00000280346.10@DLAT	ENST00000280346.10	protein_coding	112024814,112026198,112028515,112028792,112033404,112037273,112039244,112043466,112045138,112045863,112051234,112059903,112061038,112062406	112025751,112026299,112028639,112028945,112033530,112037460,112039397,112043533,112045230,112045970,112051349,112060065,112061174,112064390	Gene ID= ENSG00000150768.15 TPM= 15.18 Transcript Type= protein_coding
chr11	112067801	112074171	112067801	112074171	-	ENST00000280350.8@PIH1D2	ENST00000280350.8	protein_coding	112073980,112072998,112071635,112071038,112070436,112067801	112074171,112073205,112071758,112071283,112070701,112068005	Gene ID= ENSG00000150773.10 TPM= 1.17 Transcript Type= protein_coding
chr11	112074086	112084134	112074086	112084134	+	ENST00000420986.6@C11orf57	ENST00000420986.6	protein_coding	112074086,112075567,112078215,112080409,112081982,112082468	112074358,112075643,112078315,112080558,112082035,112084134	Gene ID= ENSG00000150776.17 TPM= 1.17 Transcript Type= protein_coding
chr11	112074289	112085150	112074289	112085150	+	ENST00000280352.13@C11orf57	ENST00000280352.13	protein_coding	112074289,112075567,112078215,112080409,112081982,112082468	112074916,112075643,112078315,112080558,112082035,112085150	Gene ID= ENSG00000150776.17 TPM= 1.75 Transcript Type= protein_coding
chr11	112074316	112085150	112074316	112085150	+	ENST00000393047.7@C11orf57	ENST00000393047.7	protein_coding	112074316,112075567,112078215,112080409,112081982,112082465	112074916,112075643,112078315,112080558,112082035,112085150	Gene ID= ENSG00000150776.17 TPM= 2.92 Transcript Type= protein_coding
chr11	112084800	112086798	112084800	112086798	-	ENST00000509359.6@TIMM8B	ENST00000509359.6	protein_coding	112086640,112085978,112084800	112086798,112086310,112085462	Gene ID= ENSG00000150779.11 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr11	112085149	112086722	112085149	112086722	-	ENST00000507614.1@TIMM8B	ENST00000507614.1	protein_coding	112086640,112085967,112085149	112086722,112086310,112085462	Gene ID= ENSG00000150779.11 TPM= 3.5 Transcript Type= processed_transcript
chr11	112086773	112095794	112086773	112095794	+	ENST00000375549.7@SDHD	ENST00000375549.7	protein_coding	112086773,112087857,112088867,112094805	112086959,112087973,112089011,112095794	Gene ID= ENSG00000204370.9 TPM= 209 Transcript Type= protein_coding
chr11	112143251	112164117	112143251	112164117	-	ENST00000280357.11@IL18	ENST00000280357.11	protein_coding	112163906,112154975,112153592,112150072,112148603,112143251	112164117,112155061,112153603,112150206,112148736,112143817	Gene ID= ENSG00000150782.11 TPM= 32.69 Transcript Type= protein_coding
chr11	112143253	112164074	112143253	112164074	-	ENST00000524595.5@IL18	ENST00000524595.5	protein_coding	112163906,112154975,112150072,112148603,112143253	112164074,112155061,112150206,112148736,112143817	Gene ID= ENSG00000150782.11 TPM= 1.17 Transcript Type= protein_coding
chr11	112175522	112218141	112175522	112218141	+	ENST00000361053.8@BCO2	ENST00000361053.8	protein_coding	112175522,112179278,112193474,112199699,112200613,112202023,112213724,112214762,112216220,112217761	112175689,112179482,112193697,112199827,112200773,112202190,112213861,112214944,112216330,112218141	Gene ID= ENSG00000197580.11 TPM= 2.34 Transcript Type= protein_coding
chr11	112226365	112233973	112226365	112233973	+	ENST00000280362.7@PTS	ENST00000280362.7	protein_coding	112226365,112228594,112230208,112230626,112233163,112233432	112226526,112228673,112230230,112230682,112233233,112233973	Gene ID= ENSG00000150787.7 TPM= 4.67 Transcript Type= protein_coding
chr11	112226367	112233909	112226367	112233909	+	ENST00000528679.5@PTS	ENST00000528679.5	protein_coding	112226367,112228594,112230626,112233163,112233432	112226526,112228673,112230682,112233233,112233909	Gene ID= ENSG00000150787.7 TPM= 4.67 Transcript Type= nonsense_mediated_decay
chr11	112226376	112233810	112226376	112233810	+	transcript7003.chr11.nic@PTS	transcript7003.chr11.nic	protein_coding	112226376,112228594,112233163,112233432	112226526,112230682,112233233,112233810	Gene ID= ENSG00000150787.7 TPM= 2.34 Transcript Type= NA
chr11	112290269	112294113	112290269	112294113	+	transcript7006.chr11.nnic@AP002884.3	transcript7006.chr11.nnic	lincRNA	112290269,112291320,112293727	112290509,112291405,112294113	Gene ID= ENSG00000250303.3 TPM= 4.67 Transcript Type= NA
chr11	112290201	112292721	112290201	112292721	+	ENST00000419895.3@AP002884.3	ENST00000419895.3	lincRNA	112290201,112291320	112290509,112292721	Gene ID= ENSG00000250303.3 TPM= 4.67 Transcript Type= lincRNA
chr11	112290268	112292170	112290268	112292170	+	ENST00000529938.1@AP002884.3	ENST00000529938.1	lincRNA	112290268,112291247	112290509,112292170	Gene ID= ENSG00000250303.3 TPM= 1.17 Transcript Type= lincRNA
chr11	113314529	113366392	113314529	113366392	+	ENST00000529221.5@TTC12	ENST00000529221.5	protein_coding	113314529,113316243,113323288,113323994,113324605,113325524,113329920,113334966,113338774,113339286,113340664,113341837,113344272,113350073,113351239,113352070,113359363,113359940,113362401,113363828,113364835,113366225	113314618,113316315,113323451,113324015,113324682,113325645,113329979,113335037,113338834,113339474,113340733,113341925,113344440,113350165,113351299,113352207,113359461,113360008,113362502,113363927,113365060,113366392	Gene ID= ENSG00000149292.16 TPM= 3.5 Transcript Type= protein_coding
chr11	113733187	113773724	113733187	113773724	-	transcript7019.chr11.nnic@ZW10	transcript7019.chr11.nnic	protein_coding	113773562,113768833,113760817,113760513,113760209,113758554,113748257,113747531,113743802,113741694,113739213,113738264,113737572,113736620,113733187	113773724,113768967,113760918,113760590,113760368,113758706,113748420,113747713,113744040,113741765,113739382,113738394,113737703,113736822,113733814	Gene ID= ENSG00000086827.8 TPM= 2.34 Transcript Type= NA
chr11	113797874	113875577	113797874	113875577	-	transcript7020.chr11.nic@USP28	transcript7020.chr11.nic	protein_coding	113875445,113854258,113852501,113841663,113840598,113834249,113833420,113831920,113830867,113829197,113827233,113823605,113817658,113815174,113813885,113812276,113809063,113808298,113804868,113804673,113803798,113803158,113801483,113797874	113875577,113854335,113852633,113841768,113840757,113834335,113833557,113831993,113830943,113829345,113827360,113823700,113817837,113815382,113813955,113812504,113809254,113808437,113805046,113804751,113803877,113803281,113801678,113799415	Gene ID= ENSG00000048028.11 TPM= 7.01 Transcript Type= NA
chr11	114059867	114250652	114059867	114250652	+	transcript7041.chr11.nnic@ZBTB16	transcript7041.chr11.nnic	protein_coding	114059867,114063211,114156337,114186952,114242167,114247198,114250326	114060142,114064568,114156434,114187038,114242337,114247365,114250652	Gene ID= ENSG00000109906.13 TPM= 11.97 Transcript Type= NA
chr11	114059605	114068076	114059605	114068076	+	transcript7055.chr11.nic@ZBTB16	transcript7055.chr11.nic	protein_coding	114059605,114063211	114059882,114068076	Gene ID= ENSG00000109906.13 TPM= 35.03 Transcript Type= NA
chr11	114059593	114250676	114059593	114250676	+	ENST00000335953.8@ZBTB16	ENST00000335953.8	protein_coding	114059593,114063211,114156337,114186952,114242167,114247198,114250326	114059882,114064568,114156434,114187038,114242337,114247365,114250676	Gene ID= ENSG00000109906.13 TPM= 386.77 Transcript Type= protein_coding
chr11	114059725	114189764	114059725	114189764	+	ENST00000541602.5@ZBTB16	ENST00000541602.5	protein_coding	114059725,114063211,114156337,114186952	114059882,114064568,114156434,114189764	Gene ID= ENSG00000109906.13 TPM= 3.5 Transcript Type= retained_intron
chr11	114060507	114250652	114060507	114250652	+	ENST00000392996.2@ZBTB16	ENST00000392996.2	protein_coding	114060507,114063211,114156337,114186952,114242167,114247198,114250326	114060584,114064568,114156434,114187038,114242337,114247365,114250652	Gene ID= ENSG00000109906.13 TPM= 9.63 Transcript Type= protein_coding
chr11	114060284	114066079	114060284	114066079	-	transcript7071.chr11.nnic@NA	transcript7071.chr11.nnic	NA	114060284	114066079	Gene ID= novel_gene_chr11_7072 TPM= 8.17 Transcript Type= NA
chr11	114072999	114075841	114072999	114075841	-	transcript7073.chr11.nnic@NA	transcript7073.chr11.nnic	NA	114072999	114075841	Gene ID= novel_gene_chr11_7074 TPM= 2.34 Transcript Type= NA
chr11	114076972	114079111	114076972	114079111	+	transcript7063.chr11.nnic@NA	transcript7063.chr11.nnic	NA	114076972	114079111	Gene ID= novel_gene_chr11_7064 TPM= 3.5 Transcript Type= NA
chr11	114078741	114082130	114078741	114082130	+	transcript7059.chr11.nnic@NA	transcript7059.chr11.nnic	NA	114078741	114082130	Gene ID= novel_gene_chr11_7060 TPM= 8.17 Transcript Type= NA
chr11	114174314	114175436	114174314	114175436	-	transcript7069.chr11.nnic@NA	transcript7069.chr11.nnic	NA	114174314	114175436	Gene ID= novel_gene_chr11_7070 TPM= 4.67 Transcript Type= NA
chr11	114250458	114255977	114250458	114255977	+	transcript7057.chr11.nnic@NA	transcript7057.chr11.nnic	NA	114250458	114255977	Gene ID= novel_gene_chr11_7058 TPM= 54.88 Transcript Type= NA
chr11	114256093	114256764	114256093	114256764	+	transcript7065.chr11.nnic@NA	transcript7065.chr11.nnic	NA	114256093	114256764	Gene ID= novel_gene_chr11_7066 TPM= 2.34 Transcript Type= NA
chr11	114296418	114312515	114296418	114312515	+	transcript7079.chr11.nic@NNMT	transcript7079.chr11.nic	protein_coding	114296418,114297951,114312045	114296710,114298194,114312515	Gene ID= ENSG00000166741.7 TPM= 10.51 Transcript Type= NA
chr11	114305343	114307844	114305343	114307844	-	transcript7082.chr11.nnic@NA	transcript7082.chr11.nnic	NA	114305343	114307844	Gene ID= novel_gene_chr11_7083 TPM= 2.34 Transcript Type= NA
chr11	114398532	114400511	114398532	114400511	-	ENST00000623205.2@C11orf71	ENST00000623205.2	protein_coding	114398532	114400511	Gene ID= ENSG00000180425.11 TPM= 3.5 Transcript Type= protein_coding
chr11	114400030	114410607	114400030	114410607	+	ENST00000540163.5@RBM7	ENST00000540163.5	protein_coding	114400030,114401698,114402828,114405709,114407445	114400767,114401860,114402915,114405799,114410607	Gene ID= ENSG00000076053.10 TPM= 3.5 Transcript Type= protein_coding
chr11	114400529	114410610	114400529	114410610	+	ENST00000624815.3@RBM7	ENST00000624815.3	protein_coding	114400529,114402828,114405706,114407445	114400767,114402915,114405799,114410610	Gene ID= ENSG00000076053.10 TPM= 1.17 Transcript Type= protein_coding
chr11	114400529	114408924	114400529	114408924	+	ENST00000375490.9@RBM7	ENST00000375490.9	protein_coding	114400529,114401698,114402828,114405706,114407445	114400767,114401860,114402915,114405799,114408924	Gene ID= ENSG00000076053.10 TPM= 39.7 Transcript Type= protein_coding
chr11	114400666	114408909	114400666	114408909	+	ENST00000542140.5@RBM7	ENST00000542140.5	protein_coding	114400666,114401698,114402832,114405706,114407445	114400767,114401860,114402915,114405799,114408909	Gene ID= ENSG00000076053.10 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr11	114439386	114450279	114439386	114450279	+	ENST00000265881.9@REXO2	ENST00000265881.9	protein_coding	114439386,114440656,114443856,114444541,114445979,114447826,114449846	114439675,114440739,114443933,114444652,114446087,114447879,114450279	Gene ID= ENSG00000076043.9 TPM= 99.25 Transcript Type= protein_coding
chr11	114439481	114450279	114439481	114450279	+	transcript7108.chr11.nic@REXO2	transcript7108.chr11.nic	protein_coding	114439481,114440656,114443856,114447826,114449846	114439675,114440739,114446087,114447879,114450279	Gene ID= ENSG00000076043.9 TPM= 2.34 Transcript Type= NA
chr11	115497820	115502636	115497820	115502636	+	transcript7117.chr11.nnic@NA	transcript7117.chr11.nnic	NA	115497820	115502636	Gene ID= novel_gene_chr11_7118 TPM= 5.84 Transcript Type= NA
chr11	116748178	116773038	116748178	116773038	-	transcript7121.chr11.nnic@BUD13	transcript7121.chr11.nnic	protein_coding	116772822,116770129,116765362,116762553,116760735,116759074,116758269,116757766,116757146,116756228,116748178	116773038,116770222,116765446,116763266,116760952,116759179,116758407,116757950,116757227,116756343,116748575	Gene ID= ENSG00000137656.11 TPM= 3.5 Transcript Type= NA
chr11	116748170	116772988	116748170	116772988	-	ENST00000260210.4@BUD13	ENST00000260210.4	protein_coding	116772822,116770129,116765362,116762553,116760735,116759074,116758269,116757766,116757146,116748170	116772988,116770222,116765446,116763266,116760952,116759179,116758407,116757950,116757227,116748575	Gene ID= ENSG00000137656.11 TPM= 33.86 Transcript Type= protein_coding
chr11	116773799	116788050	116773799	116788050	-	ENST00000227322.7@ZPR1	ENST00000227322.7	protein_coding	116787820,116787482,116786969,116786511,116785796,116785514,116785099,116784855,116784378,116783530,116782919,116782158,116779772,116773799	116788050,116787643,116787059,116786581,116785882,116785636,116785146,116784921,116784448,116783619,116783029,116782244,116779837,116779059	Gene ID= ENSG00000109917.10 TPM= 1.75 Transcript Type= protein_coding
chr11	116777720	116788060	116777720	116788060	-	transcript7129.chr11.nic@ZPR1	transcript7129.chr11.nic	protein_coding	116787820,116787482,116786969,116786511,116785796,116785514,116785099,116784859,116784378,116783530,116782919,116782158,116779772,116777720	116788060,116787643,116787059,116786581,116785882,116785636,116785146,116784921,116784498,116783619,116783029,116782244,116779837,116779059	Gene ID= ENSG00000109917.10 TPM= 4.09 Transcript Type= NA
chr11	116843402	117098441	116843402	117098441	-	transcript7135.chr11.nic@SIK3	transcript7135.chr11.nic	protein_coding	117098143,116956948,116954044,116927219,116897193,116896253,116876924,116876253,116875866,116875374,116875158,116873903,116873481,116870331,116867946,116863668,116862202,116861841,116861274,116859265,116857810,116849120,116847476,116846383,116843402	117098441,116957064,116954107,116927380,116897317,116896376,116877042,116876363,116876009,116875451,116875267,116874056,116873636,116870401,116868089,116863818,116862327,116861926,116861383,116859604,116858519,116849283,116847608,116846553,116845629	Gene ID= ENSG00000160584.15 TPM= 22.18 Transcript Type= NA
chr11	117144267	117171048	117144267	117171048	+	ENST00000527958.5@PAFAH1B2	ENST00000527958.5	protein_coding	117144267,117152441,117159934,117161145,117163770,117167421	117144418,117152528,117160023,117161261,117163892,117171048	Gene ID= ENSG00000168092.13 TPM= 323.42 Transcript Type= protein_coding
chr11	117149432	117150306	117149432	117150306	-	transcript7213.chr11.nnic@NA	transcript7213.chr11.nnic	NA	117149432	117150306	Gene ID= novel_gene_chr11_7214 TPM= 2.34 Transcript Type= NA
chr11	117178733	117197442	117178733	117197442	+	ENST00000324225.8@SIDT2	ENST00000324225.8	protein_coding	117178733,117181416,117181807,117182060,117182519,117182723,117183779,117184074,117186130,117186584,117187378,117187628,117188708,117189169,117189335,117189952,117190166,117190623,117191878,117192254,117192574,117192820,117193153,117193853,117195802,117196004	117179446,117181537,117181971,117182105,117182620,117182806,117183878,117184139,117186223,117186636,117187449,117187699,117188826,117189242,117189401,117190025,117190289,117190740,117192014,117192362,117192650,117192866,117193258,117193963,117195915,117197442	Gene ID= ENSG00000149577.15 TPM= 37.16 Transcript Type= protein_coding
chr11	117179223	117197445	117179223	117197445	+	ENST00000431081.6@SIDT2	ENST00000431081.6	protein_coding	117179223,117181416,117181807,117182060,117182519,117182723,117183779,117184074,117186130,117186584,117186990,117187378,117187628,117188729,117189169,117189335,117189952,117190166,117190623,117191878,117192254,117192574,117192820,117193153,117193853,117195802,117196004	117179446,117181537,117181971,117182105,117182620,117182806,117183878,117184139,117186223,117186636,117187001,117187449,117187699,117188826,117189242,117189401,117190025,117190289,117190740,117192014,117192362,117192650,117192866,117193258,117193963,117195915,117197445	Gene ID= ENSG00000149577.15 TPM= 22.57 Transcript Type= protein_coding
chr11	117199394	117204782	117199394	117204782	+	ENST00000278968.10@TAGLN	ENST00000278968.10	protein_coding	117199394,117203002,117203307,117203782,117204215	117199829,117203193,117203484,117203884,117204782	Gene ID= ENSG00000149591.16 TPM= 30.94 Transcript Type= protein_coding
chr11	117205074	117232083	117205074	117232083	-	transcript7156.chr11.nnic@PCSK7	transcript7156.chr11.nnic	protein_coding	117232027,117230349,117229377,117228216,117227157,117225931,117224701,117223395,117223208,117219591,117219057,117218466,117208897,117207970,117207067,117206681,117205074	117232083,117230468,117229856,117228350,117227322,117226021,117224755,117224216,117223308,117219758,117219164,117218568,117209053,117208064,117207160,117206798,117206356	Gene ID= ENSG00000160613.12 TPM= 2.92 Transcript Type= NA
chr11	117205074	117232555	117205074	117232555	-	transcript7161.chr11.nic@PCSK7	transcript7161.chr11.nic	protein_coding	117232027,117230349,117229377,117228216,117227157,117225931,117224701,117223208,117219591,117219057,117218466,117208897,117207970,117207067,117206681,117205074	117232555,117230468,117229856,117228350,117227322,117226021,117224755,117224216,117219758,117219164,117218568,117209053,117208064,117207160,117206798,117206356	Gene ID= ENSG00000160613.12 TPM= 5.25 Transcript Type= NA
chr11	117204582	117207463	117204582	117207463	+	transcript7211.chr11.nnic@NA	transcript7211.chr11.nnic	NA	117204582	117207463	Gene ID= novel_gene_chr11_7212 TPM= 19.85 Transcript Type= NA
chr11	117232647	117285686	117232647	117285686	+	transcript7159.chr11.nnic@RNF214	transcript7159.chr11.nnic	protein_coding	117232647,117234267,117238601,117239801,117244445,117246809,117279908,117280171,117281314,117281600,117281894,117282165,117282404,117282746,117283115,117285086	117232726,117234379,117239111,117239860,117244585,117246948,117280004,117280259,117281404,117281698,117281965,117282270,117282536,117282850,117283210,117285686	Gene ID= ENSG00000167257.10 TPM= 2.34 Transcript Type= NA
chr11	117232625	117285686	117232625	117285686	+	ENST00000300650.8@RNF214	ENST00000300650.8	protein_coding	117232625,117234267,117238601,117239801,117244445,117246809,117279908,117280171,117281314,117281600,117281894,117282404,117282746,117283115,117285086	117232726,117234379,117239111,117239860,117244585,117246948,117280004,117280259,117281404,117281698,117282270,117282536,117282850,117283210,117285686	Gene ID= ENSG00000167257.10 TPM= 7.01 Transcript Type= protein_coding
chr11	117304966	117306026	117304966	117306026	-	transcript7215.chr11.nnic@NA	transcript7215.chr11.nnic	NA	117304966	117306026	Gene ID= novel_gene_chr11_7216 TPM= 2.34 Transcript Type= NA
chr11	117328085	117351959	117328085	117351959	+	ENST00000527609.5@CEP164	ENST00000527609.5	protein_coding	117328085,117335605,117338566,117344166,117351790	117328208,117335680,117338668,117344277,117351959	Gene ID= ENSG00000110274.15 TPM= 1.17 Transcript Type= protein_coding
chr11	117836308	117838312	117836308	117838312	+	transcript7238.chr11.nic@AP000757.1	transcript7238.chr11.nic	antisense_RNA	117836308,117837168	117836502,117838312	Gene ID= ENSG00000254528.7 TPM= 2.34 Transcript Type= NA
chr11	117836981	117876878	117836981	117876878	-	transcript7229.chr11.nnic@FXYD6	transcript7229.chr11.nnic	protein_coding	117876592,117853309,117842719,117841990,117841791,117841148,117840319,117839781,117836981	117876878,117853403,117842781,117842028,117841865,117841184,117840368,117839830,117838277	Gene ID= ENSG00000137726.16 TPM= 35.61 Transcript Type= NA
chr11	117836976	117877031	117836976	117877031	-	ENST00000539526.5@FXYD6	ENST00000539526.5	protein_coding	117876592,117858211,117842719,117841990,117841791,117841148,117840319,117839781,117836976	117877031,117858286,117842781,117842028,117841865,117841184,117840368,117839830,117838277	Gene ID= ENSG00000137726.16 TPM= 33.28 Transcript Type= protein_coding
chr11	117903042	117929434	117903042	117929434	-	transcript7243.chr11.nnic@TMPRSS13	transcript7243.chr11.nnic	protein_coding	117929287,117918409,117917170,117914392,117913777,117911768,117910707,117909806,117908612,117905638,117903959,117903655,117903042	117929434,117918838,117917274,117914514,117913906,117911860,117910750,117909968,117908784,117905736,117904101,117903807,117903456	Gene ID= ENSG00000137747.15 TPM= 2.34 Transcript Type= NA
chr11	117907454	117929459	117907454	117929459	-	ENST00000526090.1@TMPRSS13	ENST00000526090.1	protein_coding	117929287,117918409,117917170,117914392,117913777,117911768,117910707,117909806,117907454	117929459,117918838,117917274,117914514,117913906,117911860,117910750,117909968,117908784	Gene ID= ENSG00000137747.15 TPM= 4.67 Transcript Type= protein_coding
chr11	117903042	117929395	117903042	117929395	-	ENST00000430170.6@TMPRSS13	ENST00000430170.6	protein_coding	117929287,117918409,117917170,117914392,117913777,117911768,117910707,117909806,117908612,117905638,117903959,117903655,117903042	117929395,117918838,117917274,117914514,117913906,117911860,117910750,117909968,117908784,117905736,117904101,117903807,117903451	Gene ID= ENSG00000137747.15 TPM= 3.5 Transcript Type= protein_coding
chr11	117986368	118001479	117986368	118001479	+	transcript7249.chr11.nnic@IL10RA	transcript7249.chr11.nnic	protein_coding	117986368,117986684,117988382,117989442,117993241,117993999,117995589,117998715	117986534,117986813,117988502,117989620,117993392,117994149,117995710,118001479	Gene ID= ENSG00000110324.10 TPM= 8.76 Transcript Type= NA
chr11	117986348	118001479	117986348	118001479	+	ENST00000227752.7@IL10RA	ENST00000227752.7	protein_coding	117986348,117988382,117989442,117993241,117993999,117995589,117998715	117986534,117988502,117989620,117993410,117994149,117995710,118001479	Gene ID= ENSG00000110324.10 TPM= 60.13 Transcript Type= protein_coding
chr11	118133377	118152820	118133377	118152820	-	ENST00000324727.8@SCN4B	ENST00000324727.8	protein_coding	118152613,118145057,118143833,118141207,118133377	118152820,118145229,118144061,118141336,118137120	Gene ID= ENSG00000177098.8 TPM= 39.7 Transcript Type= protein_coding
chr11	118161951	118176673	118161951	118176673	-	ENST00000278947.5@SCN2B	ENST00000278947.5	protein_coding	118176362,118168585,118168085,118161951	118176673,118168751,118168295,118167086	Gene ID= ENSG00000149575.5 TPM= 2.34 Transcript Type= protein_coding
chr11	118193740	118225094	118193740	118225094	-	ENST00000356289.9@JAML	ENST00000356289.9	protein_coding	118224941,118214824,118212407,118210487,118205882,118203428,118200474,118197998,118196735,118193740	118225094,118214886,118212561,118210712,118205991,118203665,118200612,118198091,118196821,118194417	Gene ID= ENSG00000160593.18 TPM= 3.5 Transcript Type= protein_coding
chr11	118193963	118213359	118193963	118213359	-	ENST00000292067.11@JAML	ENST00000292067.11	protein_coding	118212905,118212407,118210487,118205882,118203428,118200474,118197998,118196735,118193963	118213359,118212561,118210712,118205991,118203665,118200612,118198091,118196821,118194417	Gene ID= ENSG00000160593.18 TPM= 1.17 Transcript Type= protein_coding
chr11	118193965	118225043	118193965	118225043	-	transcript7278.chr11.nic@JAML	transcript7278.chr11.nic	protein_coding	118224941,118214824,118212407,118210487,118205882,118203428,118200474,118196735,118193965	118225043,118214886,118212561,118210712,118205991,118203665,118200612,118198091,118194417	Gene ID= ENSG00000160593.18 TPM= 6.92 Transcript Type= NA
chr11	118193965	118225011	118193965	118225011	-	transcript7279.chr11.nic@JAML	transcript7279.chr11.nic	protein_coding	118224941,118212407,118210487,118205882,118203428,118200474,118196735,118193965	118225011,118212561,118210712,118205991,118203665,118200612,118198091,118194417	Gene ID= ENSG00000160593.18 TPM= 5.76 Transcript Type= NA
chr11	118226690	118252350	118226690	118252350	-	ENST00000278949.8@MPZL3	ENST00000278949.8	protein_coding	118252222,118240211,118237050,118235424,118233460,118226690	118252350,118240377,118237260,118235589,118233523,118229920	Gene ID= ENSG00000160588.9 TPM= 15.18 Transcript Type= protein_coding
chr11	118253403	118264406	118253403	118264406	-	transcript7298.chr11.nnic@MPZL2	transcript7298.chr11.nnic	protein_coding	118264096,118262931,118262502,118260054,118257238,118253403	118264406,118263097,118262648,118260201,118257313,118255233	Gene ID= ENSG00000149573.8 TPM= 4.67 Transcript Type= NA
chr11	118256911	118264536	118256911	118264536	-	ENST00000438295.2@MPZL2	ENST00000438295.2	protein_coding	118264096,118262931,118262438,118260054,118256911	118264536,118263097,118262648,118260201,118257313	Gene ID= ENSG00000149573.8 TPM= 9.34 Transcript Type= protein_coding
chr11	118253403	118264282	118253403	118264282	-	ENST00000278937.6@MPZL2	ENST00000278937.6	protein_coding	118264096,118262931,118262438,118260054,118257238,118253403	118264282,118263097,118262648,118260201,118257313,118255233	Gene ID= ENSG00000149573.8 TPM= 64.22 Transcript Type= protein_coding
chr11	118253420	118258779	118253420	118258779	-	transcript7311.chr11.nnic@NA	transcript7311.chr11.nnic	NA	118253420	118258779	Gene ID= novel_gene_chr11_7312 TPM= 3.5 Transcript Type= NA
chr11	118256448	118259022	118256448	118259022	+	transcript7307.chr11.nnic@NA	transcript7307.chr11.nnic	NA	118256448	118259022	Gene ID= novel_gene_chr11_7308 TPM= 4.67 Transcript Type= NA
chr11	118260979	118264327	118260979	118264327	+	transcript7309.chr11.nnic@NA	transcript7309.chr11.nnic	NA	118260979	118264327	Gene ID= novel_gene_chr11_7310 TPM= 2.34 Transcript Type= NA
chr11	118264593	118266817	118264593	118266817	+	ENST00000624982.1@AP002800.1	ENST00000624982.1	TEC	118264593	118266817	Gene ID= ENSG00000280032.1 TPM= 3.5 Transcript Type= TEC
chr11	118304545	118316175	118304545	118316175	+	ENST00000361763.8@CD3E	ENST00000361763.8	protein_coding	118304545,118304894,118307288,118308427,118312153,118312618,118313707,118314448,118315486	118304776,118305001,118307308,118308441,118312170,118312866,118313874,118314494,118316175	Gene ID= ENSG00000198851.9 TPM= 4.67 Transcript Type= protein_coding
chr11	118338954	118342744	118338954	118342744	-	ENST00000300692.8@CD3D	ENST00000300692.8	protein_coding	118342553,118340375,118339775,118339451,118338954	118342744,118340593,118339906,118339494,118339227	Gene ID= ENSG00000167286.9 TPM= 5.84 Transcript Type= protein_coding
chr11	118344356	118355161	118344356	118355161	+	ENST00000532917.1@CD3G	ENST00000532917.1	protein_coding	118344356,118349027,118349743,118350552,118351628,118352404,118353119	118344478,118349050,118349970,118350683,118351671,118352487,118355161	Gene ID= ENSG00000160654.9 TPM= 4.67 Transcript Type= protein_coding
chr11	118359585	118399211	118359585	118399211	+	ENST00000252108.7@UBE4A	ENST00000252108.7	protein_coding	118359585,118365040,118368631,118369423,118371514,118372507,118373086,118373494,118374896,118376574,118379446,118381391,118382589,118384635,118384832,118386438,118389725,118390657,118392738,118396314	118359674,118365201,118368804,118369535,118371666,118372666,118373288,118373685,118375229,118376694,118379750,118381523,118382776,118384735,118384945,118386612,118389905,118390804,118392895,118399211	Gene ID= ENSG00000110344.9 TPM= 44.37 Transcript Type= protein_coding
chr11	118401154	118409851	118401154	118409851	+	ENST00000300688.7@ATP5L	ENST00000300688.7	protein_coding	118401154,118406937,118409000	118401717,118407097,118409851	Gene ID= ENSG00000167283.7 TPM= 192.65 Transcript Type= protein_coding
chr11	118401633	118409199	118401633	118409199	+	ENST00000529460.1@ATP5L	ENST00000529460.1	protein_coding	118401633,118406937,118409000	118401728,118407097,118409199	Gene ID= ENSG00000167283.7 TPM= 2.34 Transcript Type= processed_transcript
chr11	118401622	118409199	118401622	118409199	+	ENST00000533172.5@ATP5L	ENST00000533172.5	protein_coding	118401622,118406937,118409000	118401717,118406976,118409199	Gene ID= ENSG00000167283.7 TPM= 2.34 Transcript Type= processed_transcript
chr11	118436490	118526832	118436490	118526832	+	ENST00000534358.5@KMT2A	ENST00000534358.5	protein_coding	118436490,118468775,118471662,118476805,118477967,118480174,118481715,118482422,118484183,118484862,118488614,118489792,118490129,118491196,118491744,118493057,118494288,118494694,118495700,118496261,118497936,118498370,118499303,118499835,118500987,118501672,118502398,118507529,118509136,118509948,118511951,118519618,118519957,118520802,118521288,118521897	118436944,118468844,118474315,118476982,118478201,118480238,118482092,118482495,118484314,118484975,118488760,118489887,118490249,118491318,118491928,118493230,118494398,118494767,118495893,118496367,118498073,118498528,118499420,118499913,118501147,118501857,118506646,118507609,118509200,118510118,118512025,118519792,118520064,118520885,118521417,118526832	Gene ID= ENSG00000118058.20 TPM= 4.67 Transcript Type= protein_coding
chr11	118530647	118535829	118530647	118535829	+	transcript7352.chr11.nic@TMEM25	transcript7352.chr11.nic	protein_coding	118530647,118531775,118532246,118532917,118533420,118533857,118534029,118534266,118534507	118531234,118531871,118532461,118533207,118533551,118533887,118534129,118534355,118535829	Gene ID= ENSG00000149582.15 TPM= 11.29 Transcript Type= NA
chr11	118530647	118546604	118530647	118546604	+	transcript7353.chr11.nic@TMEM25	transcript7353.chr11.nic	protein_coding	118530647,118531775,118532246,118532917,118533420,118533857,118534029,118534266,118546119	118531234,118531871,118532461,118533207,118533551,118533887,118534129,118534355,118546604	Gene ID= ENSG00000149582.15 TPM= 2.34 Transcript Type= NA
chr11	118531202	118535834	118531202	118535834	+	ENST00000524522.5@TMEM25	ENST00000524522.5	protein_coding	118531202,118532917,118533857,118534029,118534269,118534507	118532461,118533207,118533887,118534129,118534355,118535834	Gene ID= ENSG00000149582.15 TPM= 3.12 Transcript Type= retained_intron
chr11	118531209	118535835	118531209	118535835	+	ENST00000313236.9@TMEM25	ENST00000313236.9	protein_coding	118531209,118531775,118532150,118532917,118533420,118533857,118534029,118534266,118534507	118531234,118531871,118532461,118533207,118533551,118533887,118534129,118534355,118535835	Gene ID= ENSG00000149582.15 TPM= 15.96 Transcript Type= protein_coding
chr11	118531202	118535833	118531202	118535833	+	ENST00000533102.5@TMEM25	ENST00000533102.5	protein_coding	118531202,118531775,118532150,118532917,118533420,118533857,118534029,118534269,118535508	118531234,118531871,118532461,118533207,118533551,118533887,118534129,118534355,118535833	Gene ID= ENSG00000149582.15 TPM= 2.34 Transcript Type= protein_coding
chr11	118544528	118566076	118544528	118566076	-	ENST00000264021.7@IFT46	ENST00000264021.7	protein_coding	118565790,118564965,118559785,118556906,118555248,118554990,118554459,118552214,118551786,118545793,118545409,118544528	118566076,118565061,118559864,118557045,118555322,118555083,118554587,118552335,118551852,118545853,118545494,118545011	Gene ID= ENSG00000118096.7 TPM= 7.01 Transcript Type= protein_coding
chr11	118544543	118566035	118544543	118566035	-	ENST00000264020.6@IFT46	ENST00000264020.6	protein_coding	118565790,118564965,118559785,118557738,118556906,118555248,118554990,118554459,118552214,118551786,118545793,118545409,118544543	118566035,118565061,118559864,118557890,118557045,118555322,118555083,118554587,118552335,118551852,118545853,118545494,118545011	Gene ID= ENSG00000118096.7 TPM= 2.34 Transcript Type= protein_coding
chr11	118572453	118602928	118572453	118602928	+	ENST00000264028.4@ARCN1	ENST00000264028.4	protein_coding	118572453,118581246,118583179,118583809,118584480,118590341,118592709,118593590,118597707,118600625	118572550,118581509,118583358,118584014,118584644,118590506,118592856,118593698,118597911,118602928	Gene ID= ENSG00000095139.13 TPM= 89.32 Transcript Type= protein_coding
chr11	118629979	118658028	118629979	118658028	+	ENST00000614369.4@PHLDB1	ENST00000614369.4	protein_coding	118629979,118631207,118631913,118632159,118635393,118638891,118639162,118643800,118644072,118645356,118645735,118647930,118650077,118650445,118655605,118656683	118630082,118631479,118632053,118632296,118635548,118639001,118639251,118643940,118644174,118645650,118645825,118648076,118650193,118650547,118655690,118658028	Gene ID= ENSG00000019144.18 TPM= 19.07 Transcript Type= processed_transcript
chr11	118631976	118658025	118631976	118658025	+	ENST00000534140.2@PHLDB1	ENST00000534140.2	protein_coding	118631976,118632159,118634923,118635393,118638891,118639162,118643800,118644072,118645356,118645735,118647930,118650077,118650445,118655605,118656683	118632053,118632296,118635051,118635548,118639001,118639251,118643940,118644174,118645650,118645825,118648076,118650193,118650547,118655690,118658025	Gene ID= ENSG00000019144.18 TPM= 14.4 Transcript Type= protein_coding
chr11	118607643	118658025	118607643	118658025	+	ENST00000356063.9@PHLDB1	ENST00000356063.9	protein_coding	118607643,118613816,118614559,118616041,118624934,118627305,118631207,118631913,118632159,118635393,118638891,118639162,118643800,118644072,118645356,118645735,118647930,118650077,118650445,118655605,118656683	118607699,118613896,118614682,118616211,118625059,118628650,118631479,118632053,118632296,118635548,118639001,118639251,118643940,118644174,118645650,118645825,118648076,118650193,118650547,118655690,118658025	Gene ID= ENSG00000019144.18 TPM= 34.25 Transcript Type= protein_coding
chr11	118721104	118729903	118721104	118729903	-	transcript7389.chr11.nnic@NA	transcript7389.chr11.nnic	NA	118729845,118729099,118721104	118729903,118729265,118722075	Gene ID= novel_gene_chr11_7390 TPM= 2.34 Transcript Type= NA
chr11	118767627	118791182	118767627	118791182	-	transcript7401.chr11.nic@DDX6	transcript7401.chr11.nic	protein_coding	118791098,118786052,118781121,118779632,118767627	118791182,118786518,118781184,118779736,118768352	Gene ID= ENSG00000110367.11 TPM= 3.5 Transcript Type= NA
chr11	118760537	118762284	118760537	118762284	+	transcript7404.chr11.nnic@NA	transcript7404.chr11.nnic	NA	118760537	118762284	Gene ID= novel_gene_chr11_7405 TPM= 2.34 Transcript Type= NA
chr11	118791254	118793137	118791254	118793137	+	ENST00000610705.1@AP004609.3	ENST00000610705.1	lincRNA	118791254	118793137	Gene ID= ENSG00000278376.1 TPM= 1.17 Transcript Type= lincRNA
chr11	118896135	118899326	118896135	118899326	-	transcript7408.chr11.nnic@NA	transcript7408.chr11.nnic	NA	118896135	118899326	Gene ID= novel_gene_chr11_7409 TPM= 23.35 Transcript Type= NA
chr11	119007310	119015745	119007310	119015745	+	transcript7423.chr11.nnic@CCDC84	transcript7423.chr11.nnic	protein_coding	119007310,119011221,119011939,119012115,119013232,119014994,119015307,119015538	119010830,119011311,119012003,119012254,119013262,119015083,119015439,119015745	Gene ID= ENSG00000186166.8 TPM= 3.12 Transcript Type= NA
chr11	119007110	119015745	119007110	119015745	+	transcript7424.chr11.nic@CCDC84	transcript7424.chr11.nic	protein_coding	119007110,119011221,119011939,119012149,119013232,119014994,119015307,119015538	119010830,119011311,119012003,119012254,119013262,119015083,119015439,119015745	Gene ID= ENSG00000186166.8 TPM= 13.63 Transcript Type= NA
chr11	119007141	119015745	119007141	119015745	+	transcript7427.chr11.nic@CCDC84	transcript7427.chr11.nic	protein_coding	119007141,119011939,119012149,119013232,119014994,119015307,119015538	119011311,119012003,119012254,119013262,119015083,119015439,119015745	Gene ID= ENSG00000186166.8 TPM= 3.12 Transcript Type= NA
chr11	118998142	119015745	118998142	119015745	+	ENST00000334418.5@CCDC84	ENST00000334418.5	protein_coding	118998142,118998430,118999011,119010764,119011221,119011939,119012149,119013232,119014994,119015307,119015538	118998317,118998593,118999109,119010830,119011283,119012003,119012254,119013262,119015083,119015439,119015745	Gene ID= ENSG00000186166.8 TPM= 10.51 Transcript Type= protein_coding
chr11	119003623	119005457	119003623	119005457	-	transcript7446.chr11.nnic@NA	transcript7446.chr11.nnic	NA	119003623	119005457	Gene ID= novel_gene_chr11_7447 TPM= 5.84 Transcript Type= NA
chr11	119006077	119007341	119006077	119007341	-	transcript7444.chr11.nnic@NA	transcript7444.chr11.nnic	NA	119006077	119007341	Gene ID= novel_gene_chr11_7445 TPM= 51.37 Transcript Type= NA
chr11	119015712	119018366	119015712	119018366	-	transcript7441.chr11.nic@RPS25	transcript7441.chr11.nic	protein_coding	119018282,119017362,119015841,119015712	119018366,119018053,119015939,119015758	Gene ID= ENSG00000118181.10 TPM= 82.51 Transcript Type= NA
chr11	119015712	119018690	119015712	119018690	-	ENST00000527673.1@RPS25	ENST00000527673.1	protein_coding	119018282,119017958,119017362,119015841,119015712	119018690,119018053,119017545,119015939,119015758	Gene ID= ENSG00000118181.10 TPM= 537.88 Transcript Type= protein_coding
chr11	119015712	119018330	119015712	119018330	-	ENST00000532567.5@RPS25	ENST00000532567.5	protein_coding	119018282,119017925,119017362,119015841,119015712	119018330,119018053,119017545,119015939,119015758	Gene ID= ENSG00000118181.10 TPM= 74.34 Transcript Type= nonsense_mediated_decay
chr11	119018432	119024134	119018432	119024134	+	ENST00000533632.5@TRAPPC4	ENST00000533632.5	protein_coding	119018432,119019143,119020150,119021760,119023321	119018970,119019317,119020253,119021886,119024134	Gene ID= ENSG00000196655.11 TPM= 35.03 Transcript Type= protein_coding
chr11	119018756	119023674	119018756	119023674	+	transcript7438.chr11.nic@TRAPPC4	transcript7438.chr11.nic	protein_coding	119018756,119019143,119020150,119023321	119018970,119019317,119021886,119023674	Gene ID= ENSG00000196655.11 TPM= 4.67 Transcript Type= NA
chr11	119018795	119023659	119018795	119023659	+	ENST00000533012.1@TRAPPC4	ENST00000533012.1	protein_coding	119018795,119019143,119021760,119023321	119018970,119019317,119021886,119023659	Gene ID= ENSG00000196655.11 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr11	119024351	119030906	119024351	119030906	-	ENST00000330775.9@SLC37A4	ENST00000330775.9	protein_coding	119030849,119029222,119028194,119027726,119027628,119026937,119026603,119025967,119025191,119024351	119030906,119029564,119028426,119027872,119027724,119027095,119026688,119026080,119025329,119025076	Gene ID= ENSG00000137700.17 TPM= 6.42 Transcript Type= protein_coding
chr11	119024356	119030876	119024356	119030876	-	transcript7429.chr11.nic@SLC37A4	transcript7429.chr11.nic	protein_coding	119029222,119028194,119027628,119026937,119025967,119025191,119024356	119030876,119028426,119027872,119027095,119026080,119025329,119025076	Gene ID= ENSG00000137700.17 TPM= 2.92 Transcript Type= NA
chr11	119024388	119030880	119024388	119030880	-	ENST00000527992.5@SLC37A4	ENST00000527992.5	protein_coding	119030849,119029222,119028194,119027628,119026937,119026603,119025967,119025191,119024388	119030880,119029564,119028426,119027872,119027095,119026688,119026080,119025329,119025076	Gene ID= ENSG00000137700.17 TPM= 22.18 Transcript Type= processed_transcript
chr11	119044189	119057246	119044189	119057246	-	transcript7453.chr11.nic@HYOU1	transcript7453.chr11.nic	protein_coding	119057153,119056070,119055750,119055493,119055185,119054984,119054494,119054121,119052637,119052295,119052090,119051819,119051438,119051035,119049777,119049556,119049018,119048714,119048476,119048248,119047947,119047734,119046562,119046417,119045781,119044189	119057246,119056167,119055843,119055571,119055339,119055060,119054675,119054236,119052829,119052429,119052172,119051951,119051625,119051173,119049837,119049635,119049203,119048886,119048563,119048370,119048080,119047818,119046802,119046467,119045831,119045654	Gene ID= ENSG00000149428.18 TPM= 61.88 Transcript Type= NA
chr11	119044189	119057137	119044189	119057137	-	ENST00000617285.4@HYOU1	ENST00000617285.4	protein_coding	119057020,119056070,119055750,119055493,119055185,119054984,119054494,119054121,119052637,119052295,119052090,119051819,119051438,119051035,119049777,119049556,119049018,119048714,119048476,119048248,119047947,119047734,119046562,119046417,119045781,119044189	119057137,119056167,119055843,119055571,119055339,119055060,119054675,119054236,119052829,119052429,119052172,119051951,119051625,119051173,119049837,119049635,119049203,119048886,119048563,119048370,119048080,119047818,119046802,119046467,119045831,119045654	Gene ID= ENSG00000149428.18 TPM= 138.94 Transcript Type= protein_coding
chr11	119067801	119081964	119067801	119081964	+	transcript7458.chr11.nic@VPS11	transcript7458.chr11.nic	protein_coding	119067801,119069196,119069442,119070234,119071596,119073198,119073800,119076819,119077501,119077878,119078173,119078565,119078795,119079129,119081092,119081459	119068010,119069344,119069577,119070397,119071843,119073399,119073951,119077083,119077647,119078066,119078334,119078704,119078997,119079300,119081314,119081964	Gene ID= ENSG00000160695.14 TPM= 5.55 Transcript Type= NA
chr11	119067692	119081978	119067692	119081978	+	ENST00000621676.4@VPS11	ENST00000621676.4	protein_coding	119067692,119069196,119069442,119070234,119071596,119073198,119073800,119076897,119077501,119077878,119078173,119078565,119078795,119079129,119081092,119081459	119068010,119069344,119069577,119070397,119071843,119073399,119073951,119077083,119077647,119078066,119078334,119078704,119078997,119079300,119081314,119081978	Gene ID= ENSG00000160695.14 TPM= 117.44 Transcript Type= protein_coding
chr11	119067821	119081967	119067821	119081967	+	ENST00000614944.4@VPS11	ENST00000614944.4	protein_coding	119067821,119069173,119069442,119070234,119071596,119073198,119073800,119076897,119077501,119077878,119078173,119078565,119078795,119079129,119081092,119081459	119068202,119069344,119069577,119070397,119071843,119073399,119073951,119077083,119077647,119078066,119078334,119078704,119078997,119079300,119081314,119081967	Gene ID= ENSG00000160695.14 TPM= 7.68 Transcript Type= protein_coding
chr11	119084875	119093547	119084875	119093547	+	transcript7475.chr11.nic@HMBS	transcript7475.chr11.nic	protein_coding	119084875,119088255,119088635,119089082,119089217,119089683,119089990,119090190,119091413,119092125,119092935,119093110	119085066,119088308,119088707,119089131,119089272,119089760,119090067,119090265,119091526,119092811,119093021,119093547	Gene ID= ENSG00000256269.7 TPM= 4.67 Transcript Type= NA
chr11	119084883	119093547	119084883	119093547	+	ENST00000278715.7@HMBS	ENST00000278715.7	protein_coding	119084883,119088255,119088635,119089082,119089217,119089683,119089990,119090190,119091413,119092125,119092404,119092758,119092935,119093110	119085066,119088308,119088707,119089131,119089272,119089760,119090067,119090265,119091526,119092163,119092523,119092811,119093021,119093547	Gene ID= ENSG00000256269.7 TPM= 30.36 Transcript Type= protein_coding
chr11	119084885	119093516	119084885	119093516	+	ENST00000537841.5@HMBS	ENST00000537841.5	protein_coding	119084885,119088255,119088635,119089082,119089217,119089683,119089990,119090190,119091413,119092125,119092404,119092758,119092935,119093110	119085157,119088308,119088707,119089131,119089272,119089760,119090067,119090265,119091526,119092163,119092523,119092811,119093021,119093516	Gene ID= ENSG00000256269.7 TPM= 2.34 Transcript Type= protein_coding
chr11	119093854	119095467	119093854	119095467	-	ENST00000530167.1@H2AFX	ENST00000530167.1	protein_coding	119093854	119095467	Gene ID= ENSG00000188486.3 TPM= 26.27 Transcript Type= protein_coding
chr11	119093879	119095449	119093879	119095449	-	ENST00000375167.1@H2AFX	ENST00000375167.1	protein_coding	119094460,119093879	119095449,119094261	Gene ID= ENSG00000188486.3 TPM= 5.25 Transcript Type= nonsense_mediated_decay
chr11	119096507	119102142	119096507	119102142	-	ENST00000354202.8@DPAGT1	ENST00000354202.8	protein_coding	119101495,119101018,119100630,119100262,119098403,119097855,119097464,119097142,119096507	119102142,119101138,119100843,119100408,119098487,119098043,119097551,119097297,119097063	Gene ID= ENSG00000172269.18 TPM= 49.42 Transcript Type= protein_coding
chr11	119096510	119101878	119096510	119101878	-	ENST00000392834.7@DPAGT1	ENST00000392834.7	protein_coding	119101495,119100630,119100262,119098403,119097855,119097464,119097142,119096510	119101878,119100843,119100408,119098487,119098043,119097551,119097297,119097063	Gene ID= ENSG00000172269.18 TPM= 4.47 Transcript Type= nonsense_mediated_decay
chr11	119096514	119101875	119096514	119101875	-	transcript7484.chr11.nic@DPAGT1	transcript7484.chr11.nic	protein_coding	119101495,119101018,119100630,119100262,119098403,119097855,119097464,119096514	119101875,119101138,119100843,119100408,119098487,119098043,119097551,119097297	Gene ID= ENSG00000172269.18 TPM= 3.3 Transcript Type= NA
chr11	119107342	119117117	119107342	119117117	+	transcript7494.chr11.nnic@C2CD2L	transcript7494.chr11.nnic	protein_coding	119107342,119110104,119110561,119111052,119111263,119111521,119112328,119112482,119112700,119113611,119113855,119114080,119116045	119108095,119110199,119110680,119111168,119111374,119111629,119112392,119112609,119112874,119113712,119113988,119114365,119117117	Gene ID= ENSG00000172375.12 TPM= 3.5 Transcript Type= NA
chr11	119107383	119118544	119107383	119118544	+	ENST00000336702.7@C2CD2L	ENST00000336702.7	protein_coding	119107383,119110104,119110561,119110847,119111052,119111263,119111521,119112328,119112482,119112700,119113611,119113852,119114080,119116045	119108095,119110199,119110680,119110957,119111168,119111374,119111629,119112392,119112609,119112874,119113712,119113988,119114365,119118544	Gene ID= ENSG00000172375.12 TPM= 10.51 Transcript Type= protein_coding
chr11	119121580	119135054	119121580	119135054	+	transcript7503.chr11.nnic@HINFP	transcript7503.chr11.nnic	protein_coding	119121580,119123568,119126935,119130725,119131535,119131830,119132496,119132661,119132864,119133095,119134084	119121639,119123684,119127125,119130954,119131646,119131982,119132573,119132781,119133002,119133219,119135054	Gene ID= ENSG00000172273.12 TPM= 12.84 Transcript Type= NA
chr11	119121578	119135053	119121578	119135053	+	transcript7504.chr11.nic@HINFP	transcript7504.chr11.nic	protein_coding	119121578,119126935,119130725,119131535,119131830,119132243,119132496,119132661,119132864,119133095	119121639,119127125,119130954,119131646,119131982,119132297,119132573,119132781,119133002,119135053	Gene ID= ENSG00000172273.12 TPM= 3.5 Transcript Type= NA
chr11	119121587	119136044	119121587	119136044	+	ENST00000350777.6@HINFP	ENST00000350777.6	protein_coding	119121587,119126935,119130725,119131535,119131830,119132496,119132661,119132864,119133095,119134084	119121639,119127125,119130954,119131646,119131982,119132573,119132781,119133002,119133219,119136044	Gene ID= ENSG00000172273.12 TPM= 1.17 Transcript Type= protein_coding
chr11	119168721	119184016	119168721	119184016	+	transcript7512.chr11.nic@NLRX1	transcript7512.chr11.nic	protein_coding	119168721,119171356,119172356,119172901,119173479,119174453,119179693,119181171,119182094,119183821	119168894,119171473,119172425,119172989,119174098,119175274,119180288,119181257,119182345,119184016	Gene ID= ENSG00000160703.15 TPM= 3.06 Transcript Type= NA
chr11	119168722	119184016	119168722	119184016	+	transcript7514.chr11.nic@NLRX1	transcript7514.chr11.nic	protein_coding	119168722,119171356,119172356,119172901,119173479,119174453,119179693,119181171,119182094,119183821	119169302,119171473,119172425,119172989,119174098,119175274,119180288,119181257,119182345,119184016	Gene ID= ENSG00000160703.15 TPM= 4.23 Transcript Type= NA
chr11	119168727	119184012	119168727	119184012	+	transcript7516.chr11.nic@NLRX1	transcript7516.chr11.nic	protein_coding	119168727,119171356,119172356,119172901,119173479,119174453,119179693,119181171,119182094,119183118	119169042,119171473,119172425,119172989,119174098,119175274,119180288,119181257,119182345,119184012	Gene ID= ENSG00000160703.15 TPM= 9.59 Transcript Type= NA
chr11	119168729	119184014	119168729	119184014	+	ENST00000292199.6@NLRX1	ENST00000292199.6	protein_coding	119168729,119171356,119172356,119172901,119173479,119174453,119179693,119181171,119182094,119183118	119168921,119171473,119172425,119172989,119174098,119175274,119180288,119181257,119182345,119184014	Gene ID= ENSG00000160703.15 TPM= 3.75 Transcript Type= protein_coding
chr11	119168721	119184012	119168721	119184012	+	transcript7519.chr11.nic@NLRX1	transcript7519.chr11.nic	protein_coding	119168721,119171356,119172901,119173479,119174453,119179693,119181171,119182094,119183118	119168894,119171473,119172989,119174098,119175274,119180288,119181257,119182345,119184012	Gene ID= ENSG00000160703.15 TPM= 3.46 Transcript Type= NA
chr11	119168727	119184012	119168727	119184012	+	transcript7523.chr11.nic@NLRX1	transcript7523.chr11.nic	protein_coding	119168727,119171356,119172901,119173479,119174453,119179693,119181171,119182094,119183118	119169042,119171473,119172989,119174098,119175274,119180288,119181257,119182345,119184012	Gene ID= ENSG00000160703.15 TPM= 6.96 Transcript Type= NA
chr11	119168764	119184016	119168764	119184016	+	ENST00000409109.5@NLRX1	ENST00000409109.5	protein_coding	119168764,119171356,119172356,119172901,119173479,119174453,119179693,119181171,119182094,119183118	119169302,119171473,119172425,119172989,119174098,119175274,119180288,119181257,119182345,119184016	Gene ID= ENSG00000160703.15 TPM= 11.92 Transcript Type= protein_coding
chr11	119168728	119184012	119168728	119184012	+	ENST00000409991.5@NLRX1	ENST00000409991.5	protein_coding	119168728,119171356,119172356,119172901,119173479,119174453,119179693,119181171,119182094,119183118	119168894,119171473,119172425,119172989,119174098,119175274,119180288,119181257,119182345,119184012	Gene ID= ENSG00000160703.15 TPM= 11.92 Transcript Type= protein_coding
chr11	119206276	119308149	119206276	119308149	+	ENST00000264033.5@CBL	ENST00000264033.5	protein_coding	119206276,119232448,119271735,119273868,119274832,119275997,119277757,119278166,119278510,119284969,119285189,119287852,119296918,119297384,119298358,119299495	119206612,119232695,119271881,119274024,119274953,119276134,119277844,119278297,119278713,119285100,119285566,119287946,119297034,119297481,119298540,119308149	Gene ID= ENSG00000110395.6 TPM= 17.51 Transcript Type= protein_coding
chr11	119308528	119317134	119308528	119317134	-	transcript7547.chr11.nic@MCAM	transcript7547.chr11.nic	protein_coding	119317035,119315139,119314833,119314679,119314489,119312770,119312527,119312266,119312052,119311808,119311530,119311280,119311090,119310756,119308528	119317134,119315263,119315040,119314749,119314576,119312949,119312648,119312428,119312170,119311949,119311651,119311421,119311185,119310903,119309915	Gene ID= ENSG00000076706.16 TPM= 4.67 Transcript Type= NA
chr11	119308529	119317116	119308529	119317116	-	ENST00000264036.5@MCAM	ENST00000264036.5	protein_coding	119317035,119315139,119314833,119314679,119314489,119312770,119312527,119312266,119312052,119311808,119311530,119311280,119311090,119310756,119310349,119308529	119317116,119315263,119315040,119314749,119314576,119312949,119312648,119312428,119312170,119311949,119311651,119311421,119311185,119310903,119310466,119309915	Gene ID= ENSG00000076706.16 TPM= 194.99 Transcript Type= protein_coding
chr11	119308972	119317130	119308972	119317130	-	ENST00000528533.5@MCAM	ENST00000528533.5	protein_coding	119317035,119315139,119314833,119314679,119314489,119312770,119312527,119312266,119312052,119311808,119311530,119310756,119310349,119308972	119317130,119315263,119315040,119314749,119314576,119312949,119312648,119312428,119312170,119311949,119311651,119311421,119310466,119309915	Gene ID= ENSG00000076706.16 TPM= 2.34 Transcript Type= retained_intron
chr11	119334527	119337313	119334527	119337313	+	ENST00000311413.4@RNF26	ENST00000311413.4	protein_coding	119334527	119337313	Gene ID= ENSG00000173456.4 TPM= 75.89 Transcript Type= protein_coding
chr11	119338939	119340883	119338939	119340883	-	ENST00000528368.2@C1QTNF5	ENST00000528368.2	protein_coding	119340695,119340184,119338939	119340883,119340440,119339848	Gene ID= ENSG00000223953.5 TPM= 145.37 Transcript Type= protein_coding
chr11	119338942	119346673	119338942	119346673	-	ENST00000619721.5@MFRP	ENST00000619721.5	protein_coding	119346460,119346272,119346046,119345773,119345420,119344874,119344632,119344315,119343816,119342873,119342596,119341857,119340695,119340184,119338942	119346673,119346374,119346159,119345928,119345633,119345004,119344757,119344391,119343964,119343003,119342727,119341984,119341772,119340440,119339848	Gene ID= ENSG00000235718.8 TPM= 134.86 Transcript Type= protein_coding
chr11	119338942	119340898	119338942	119340898	-	transcript7564.chr11.nic@MFRP	transcript7564.chr11.nic	protein_coding	119340695,119338942	119340898,119340440	Gene ID= ENSG00000235718.8 TPM= 19.85 Transcript Type= NA
chr11	119417378	119424128	119417378	119424128	-	ENST00000284240.9@THY1	ENST00000284240.9	protein_coding	119423113,119420869,119420051,119417378	119424128,119420929,119420386,119419520	Gene ID= ENSG00000154096.13 TPM= 1.17 Transcript Type= protein_coding
chr11	120111275	120138453	120111275	120138453	-	ENST00000341846.9@TRIM29	ENST00000341846.9	protein_coding	120137228,120128400,120127336,120125691,120122954,120120573,120118223,120115338,120111275	120138453,120128495,120127569,120125889,120123055,120120665,120118321,120115414,120112476	Gene ID= ENSG00000137699.16 TPM= 4.67 Transcript Type= protein_coding
chr11	120210767	120230332	120210767	120230332	+	ENST00000328965.8@OAF	ENST00000328965.8	protein_coding	120210767,120225661,120226816,120228868	120211510,120225795,120226996,120230332	Gene ID= ENSG00000184232.8 TPM= 67.72 Transcript Type= protein_coding
chr11	120213837	120217585	120213837	120217585	+	transcript7579.chr11.nnic@NA	transcript7579.chr11.nnic	NA	120213837	120217585	Gene ID= novel_gene_chr11_7580 TPM= 2.34 Transcript Type= NA
chr11	120325129	120333679	120325129	120333679	+	ENST00000375095.2@TMEM136	ENST00000375095.2	protein_coding	120325129,120327441,120329977	120325368,120327640,120333679	Gene ID= ENSG00000181264.8 TPM= 2.92 Transcript Type= protein_coding
chr11	120325296	120333679	120325296	120333679	+	ENST00000531346.1@TMEM136	ENST00000531346.1	protein_coding	120325296,120329977	120325368,120333679	Gene ID= ENSG00000181264.8 TPM= 1.75 Transcript Type= processed_transcript
chr11	120511700	120988904	120511700	120988904	+	ENST00000527524.7@GRIK4	ENST00000527524.7	protein_coding	120511700,120653685,120660269,120802693,120815378,120819755,120831852,120836791,120861959,120874066,120875139,120898532,120905290,120940347,120952855,120956780,120960909,120962456,120967195,120982106,120985904	120511887,120653792,120660400,120802857,120815475,120819920,120832030,120836844,120862120,120874218,120875243,120898639,120905493,120940460,120952964,120956953,120961074,120962681,120967323,120982224,120988904	Gene ID= ENSG00000149403.12 TPM= 1.17 Transcript Type= protein_coding
chr11	120861095	120986685	120861095	120986685	+	transcript7599.chr11.nnic@GRIK4	transcript7599.chr11.nnic	protein_coding	120861095,120874066,120875139,120898532,120905279,120940347,120952855,120956780,120960909,120962456,120967195,120982106,120985904	120862120,120874218,120875243,120898639,120905493,120940460,120952964,120956953,120961074,120962681,120967323,120982224,120986685	Gene ID= ENSG00000149403.12 TPM= 2.34 Transcript Type= NA
chr11	120511746	120986685	120511746	120986685	+	ENST00000638419.1@GRIK4	ENST00000638419.1	protein_coding	120511746,120653688,120660269,120802693,120815378,120819755,120831852,120836791,120861959,120874066,120875139,120898532,120905290,120940347,120952855,120956780,120960909,120962456,120967195,120982106,120985904	120511887,120653792,120660400,120802857,120815475,120819920,120832030,120836844,120862120,120874218,120875243,120898639,120905493,120940460,120952964,120956953,120961074,120962681,120967323,120982224,120986685	Gene ID= ENSG00000149403.12 TPM= 3.5 Transcript Type= protein_coding
chr11	121024121	121090775	121024121	121090775	+	ENST00000422003.6@TBCEL	ENST00000422003.6	protein_coding	121024121,121045674,121047528,121053551,121055052,121058345,121059969,121086778	121024291,121045823,121047667,121053732,121055308,121058471,121060085,121090775	Gene ID= ENSG00000154114.12 TPM= 21.02 Transcript Type= protein_coding
chr11	121024093	121089607	121024093	121089607	+	ENST00000284259.11@TBCEL	ENST00000284259.11	protein_coding	121024093,121045674,121047528,121053630,121055052,121058345,121059969,121086778	121024291,121045823,121047667,121053732,121055308,121058471,121060085,121089607	Gene ID= ENSG00000154114.12 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr11	121292453	121308694	121292453	121308694	+	ENST00000264027.8@SC5D	ENST00000264027.8	protein_coding	121292453,121303366,121304361,121306386,121307057	121292816,121303585,121304493,121306486,121308694	Gene ID= ENSG00000109929.9 TPM= 10.51 Transcript Type= protein_coding
chr11	121308766	121313409	121308766	121313409	+	transcript7616.chr11.nnic@NA	transcript7616.chr11.nnic	NA	121308766	121313409	Gene ID= novel_gene_chr11_7617 TPM= 19.85 Transcript Type= NA
chr11	121576760	121629691	121576760	121629691	+	ENST00000532694.5@SORL1	ENST00000532694.5	protein_coding	121576760,121577281,121583458,121586222,121588020,121589259,121590040,121591001,121595623,121604193,121605113,121605402,121606845,121607186,121608104,121611076,121612736,121614871,121618774,121619753,121621064,121622162,121625085,121627555,121629496	121577138,121577400,121583583,121586329,121588151,121589390,121590174,121591156,121595772,121604324,121605239,121605571,121606957,121607290,121608176,121611158,121612832,121615055,121618893,121619917,121621238,121622268,121625277,121627767,121629691	Gene ID= ENSG00000137642.12 TPM= 1.17 Transcript Type= protein_coding
chr11	121452072	121570547	121452072	121570547	+	transcript7620.chr11.nic@SORL1	transcript7620.chr11.nic	protein_coding	121452072,121470007,121478118,121488032,121490043,121496869,121513003,121514152,121520657,121522586,121522916,121532464,121543548,121545243,121549960,121550585,121553937,121555187,121557314,121558591,121559519,121566940,121570157	121452616,121470123,121478243,121488193,121490110,121497049,121513104,121514321,121520849,121522703,121522989,121532552,121543726,121545429,121550088,121550670,121554109,121555318,121557405,121558837,121559657,121567113,121570547	Gene ID= ENSG00000137642.12 TPM= 5.25 Transcript Type= NA
chr11	121452203	121633693	121452203	121633693	+	ENST00000260197.11@SORL1	ENST00000260197.11	protein_coding	121452203,121470007,121478118,121488032,121490043,121496869,121513003,121514152,121520657,121522586,121522916,121532464,121543548,121545243,121549960,121550585,121553937,121555187,121557314,121558591,121559519,121566940,121570157,121574241,121577281,121583458,121586222,121588020,121589259,121590040,121591001,121595623,121604193,121605113,121605402,121606845,121607186,121608104,121611076,121612736,121614871,121618774,121619753,121621064,121622162,121625085,121627555,121629496	121452616,121470123,121478243,121488193,121490110,121497049,121513104,121514321,121520849,121522703,121522989,121532552,121543726,121545429,121550088,121550670,121554109,121555318,121557405,121558837,121559657,121567113,121570270,121574363,121577400,121583583,121586329,121588151,121589390,121590174,121591156,121595772,121604324,121605239,121605571,121606957,121607290,121608176,121611158,121612832,121615055,121618893,121619917,121621238,121622268,121625277,121627767,121633693	Gene ID= ENSG00000137642.12 TPM= 11.09 Transcript Type= protein_coding
chr11	121547334	121549329	121547334	121549329	-	transcript7622.chr11.nnic@NA	transcript7622.chr11.nnic	NA	121547334	121549329	Gene ID= novel_gene_chr11_7623 TPM= 2.34 Transcript Type= NA
chr11	122089106	122102166	122089106	122102166	-	ENST00000529823.1@MIR100HG	ENST00000529823.1	processed_transcript	122101447,122089106	122102166,122091719	Gene ID= ENSG00000255248.7 TPM= 2.34 Transcript Type= lincRNA
chr11	122089110	122101029	122089110	122101029	-	ENST00000528986.1@MIR100HG	ENST00000528986.1	processed_transcript	122100374,122089110	122101029,122091740	Gene ID= ENSG00000255248.7 TPM= 2.34 Transcript Type= lincRNA
chr11	122655675	122814473	122655675	122814473	+	ENST00000284273.5@UBASH3B	ENST00000284273.5	protein_coding	122655675,122776219,122777024,122779497,122783053,122789100,122794702,122796156,122796911,122798942,122801188,122806410,122808067,122809749	122656210,122776272,122777210,122779695,122783222,122789308,122794834,122796276,122797033,122799034,122801332,122806516,122808176,122814473	Gene ID= ENSG00000154127.9 TPM= 10.74 Transcript Type= protein_coding
chr11	122779347	122813118	122779347	122813118	+	transcript7634.chr11.nic@UBASH3B	transcript7634.chr11.nic	protein_coding	122779347,122783053,122789100,122794702,122796156,122796911,122798942,122801188,122806410,122808067,122809749	122779695,122783222,122789308,122794834,122796276,122797033,122799034,122801332,122806516,122808176,122813118	Gene ID= ENSG00000154127.9 TPM= 2.57 Transcript Type= NA
chr11	122882528	122959721	122882528	122959721	+	ENST00000227349.6@C11orf63	ENST00000227349.6	protein_coding	122882528,122885761,122903925,122924897,122934420,122946498,122956496,122957363,122959248	122882972,122886193,122904444,122925010,122935075,122946792,122956576,122957491,122959721	Gene ID= ENSG00000109944.10 TPM= 8.17 Transcript Type= protein_coding
chr11	123057489	123062335	123057489	123062335	-	ENST00000534624.5@HSPA8	ENST00000534624.5	protein_coding	123062064,123061120,123060593,123060116,123059473,123059059,123058632,123058252,123057489	123062335,123061329,123060798,123060268,123060028,123059261,123058830,123058484,123057919	Gene ID= ENSG00000109971.13 TPM= 1931.2 Transcript Type= protein_coding
chr11	123430694	123622676	123430694	123622676	+	ENST00000635736.1@GRAMD1B	ENST00000635736.1	protein_coding	123430694,123480816,123577367,123584312,123594082,123594735,123595942,123600468,123603426,123605322,123606609,123608659,123609795,123610196,123612761,123613455,123614745,123618693,123619107,123622506	123431166,123480893,123577577,123584332,123594166,123594838,123596037,123600548,123603541,123605478,123606798,123608802,123609913,123610338,123612864,123613658,123614835,123618800,123619224,123622676	Gene ID= ENSG00000023171.16 TPM= 1.17 Transcript Type= protein_coding
chr11	123724341	123741675	123724341	123741675	-	transcript7669.chr11.nic@ZNF202	transcript7669.chr11.nic	protein_coding	123741549,123740417,123740117,123730487,123729615,123729126,123728133,123727476,123724341	123741675,123740536,123740232,123730985,123729825,123729214,123728262,123727595,123726991	Gene ID= ENSG00000166261.10 TPM= 2.34 Transcript Type= NA
chr11	123724780	123741675	123724780	123741675	-	transcript7674.chr11.nic@ZNF202	transcript7674.chr11.nic	protein_coding	123741549,123740117,123730487,123729615,123729126,123728133,123727476,123724780	123741675,123740536,123730985,123729825,123729214,123728262,123727595,123726991	Gene ID= ENSG00000166261.10 TPM= 3.5 Transcript Type= NA
chr11	123724780	123741671	123724780	123741671	-	ENST00000529691.1@ZNF202	ENST00000529691.1	protein_coding	123741549,123730487,123729615,123729126,123728133,123727476,123724780	123741671,123730985,123729825,123729214,123728262,123727595,123726991	Gene ID= ENSG00000166261.10 TPM= 4.67 Transcript Type= protein_coding
chr11	124115362	124147721	124115362	124147721	+	ENST00000456829.6@VWA5A	ENST00000456829.6	protein_coding	124115362,124116566,124117497,124117673,124118189,124118533,124118975,124122960,124123366,124123660,124124237,124134920,124136129,124136574,124137015,124141598,124142442,124145237,124145866	124115482,124116680,124117554,124117875,124118411,124118708,124119089,124123129,124123454,124123804,124124316,124135034,124136293,124136674,124137268,124141741,124142572,124145363,124147721	Gene ID= ENSG00000110002.15 TPM= 5.84 Transcript Type= protein_coding
chr11	124115404	124146909	124115404	124146909	+	ENST00000392748.5@VWA5A	ENST00000392748.5	protein_coding	124115404,124117497,124117673,124118189,124118533,124118975,124122960,124123366,124123660,124124237,124134920,124136129,124136574,124137015,124141598,124142442,124145237,124145866	124115482,124117554,124117875,124118411,124118708,124119089,124123129,124123454,124123804,124124316,124135034,124136293,124136674,124137268,124141741,124142572,124145363,124146909	Gene ID= ENSG00000110002.15 TPM= 55.46 Transcript Type= protein_coding
chr11	124115404	124124841	124115404	124124841	+	ENST00000449321.5@VWA5A	ENST00000449321.5	protein_coding	124115404,124116566,124117497,124117673,124118189,124118533,124118975,124122960,124123366,124123660,124124237	124115482,124116680,124117554,124117875,124118411,124118708,124119089,124123129,124123454,124123804,124124841	Gene ID= ENSG00000110002.15 TPM= 10.51 Transcript Type= protein_coding
chr11	124115404	124124841	124115404	124124841	+	ENST00000361352.9@VWA5A	ENST00000361352.9	protein_coding	124115404,124117497,124117673,124118189,124118533,124118975,124122960,124123366,124123660,124124237	124115482,124117554,124117875,124118411,124118708,124119089,124123129,124123454,124123804,124124841	Gene ID= ENSG00000110002.15 TPM= 16.35 Transcript Type= protein_coding
chr11	124256376	124266218	124256376	124266218	+	ENST00000641992.1@OR8G5	ENST00000641992.1	protein_coding	124256376,124264918	124256634,124266218	Gene ID= ENSG00000255298.3 TPM= 4.67 Transcript Type= protein_coding
chr11	124622860	124634708	124622860	124634708	+	transcript7699.chr11.nic@TBRG1	transcript7699.chr11.nic	protein_coding	124622860,124624931,124625671,124626693,124626904,124630388,124630745,124631275,124632093	124623233,124625001,124625903,124626751,124627050,124630485,124630855,124631417,124634708	Gene ID= ENSG00000154144.12 TPM= 2.34 Transcript Type= NA
chr11	124622836	124632434	124622836	124632434	+	ENST00000473629.6@TBRG1	ENST00000473629.6	protein_coding	124622836,124624931,124625671,124626813,124630388,124630745,124631275,124632093	124623233,124625001,124625903,124627050,124630485,124630855,124631417,124632434	Gene ID= ENSG00000154144.12 TPM= 4.67 Transcript Type= retained_intron
chr11	124622858	124632434	124622858	124632434	+	transcript7708.chr11.nic@TBRG1	transcript7708.chr11.nic	protein_coding	124622858,124625671,124626473,124630388,124630745,124631275,124632093	124625001,124625903,124627050,124630485,124630855,124631417,124632434	Gene ID= ENSG00000154144.12 TPM= 3.5 Transcript Type= NA
chr11	124622875	124635398	124622875	124635398	+	ENST00000284290.8@TBRG1	ENST00000284290.8	protein_coding	124622875,124624931,124625671,124626904,124630388,124630745,124631275,124632093	124623233,124625001,124625903,124627050,124630485,124630855,124631417,124635398	Gene ID= ENSG00000154144.12 TPM= 7.01 Transcript Type= nonsense_mediated_decay
chr11	124633113	124673881	124633113	124673881	-	ENST00000263593.7@SIAE	ENST00000263593.7	protein_coding	124673642,124669360,124660628,124654655,124649619,124648066,124647365,124639710,124638542,124633113	124673881,124669521,124660803,124654793,124649796,124648175,124647498,124639867,124638737,124637202	Gene ID= ENSG00000110013.12 TPM= 10.51 Transcript Type= protein_coding
chr11	124673798	124694661	124673798	124694661	+	ENST00000227135.6@SPA17	ENST00000227135.6	protein_coding	124673798,124675238,124681389,124691696,124694303	124673952,124675418,124681459,124691782,124694661	Gene ID= ENSG00000064199.6 TPM= 1.17 Transcript Type= protein_coding
chr11	124739846	124747210	124739846	124747210	+	ENST00000284292.10@NRGN	ENST00000284292.10	protein_coding	124739846,124745503,124745965,124746404	124740099,124745729,124745982,124747210	Gene ID= ENSG00000154146.12 TPM= 54.49 Transcript Type= protein_coding
chr11	124739933	124747210	124739933	124747210	+	transcript7754.chr11.nic@NRGN	transcript7754.chr11.nic	protein_coding	124739933,124745503,124746404	124740099,124745982,124747210	Gene ID= ENSG00000154146.12 TPM= 6.62 Transcript Type= NA
chr11	124740045	124747206	124740045	124747206	+	ENST00000412681.2@NRGN	ENST00000412681.2	protein_coding	124740045,124745503,124745962,124746404	124740099,124745729,124745982,124747206	Gene ID= ENSG00000154146.12 TPM= 6.62 Transcript Type= protein_coding
chr11	124747472	124752238	124747472	124752238	-	ENST00000326621.9@VSIG2	ENST00000326621.9	protein_coding	124752077,124751423,124750714,124749708,124748644,124748390,124747472	124752238,124751580,124750921,124749866,124748763,124748534,124747667	Gene ID= ENSG00000019102.11 TPM= 29.19 Transcript Type= protein_coding
chr11	124748106	124752193	124748106	124752193	-	ENST00000403470.1@VSIG2	ENST00000403470.1	protein_coding	124752077,124751423,124750714,124749708,124748644,124748106	124752193,124751580,124750921,124749866,124748763,124748534	Gene ID= ENSG00000019102.11 TPM= 8.17 Transcript Type= protein_coding
chr11	124753123	124762284	124753123	124762284	-	ENST00000278927.9@ESAM	ENST00000278927.9	protein_coding	124762085,124758349,124756541,124756207,124754641,124754214,124753123	124762284,124758527,124756742,124756362,124754763,124754340,124753961	Gene ID= ENSG00000149564.11 TPM= 338.52 Transcript Type= protein_coding
chr11	124753123	124762280	124753123	124762280	-	ENST00000417453.5@ESAM	ENST00000417453.5	protein_coding	124762085,124758349,124756541,124756207,124754630,124754214,124753123	124762280,124758527,124756742,124756362,124754763,124754340,124753961	Gene ID= ENSG00000149564.11 TPM= 51.29 Transcript Type= nonsense_mediated_decay
chr11	124757695	124760644	124757695	124760644	-	transcript7769.chr11.nnic@NA	transcript7769.chr11.nnic	NA	124757695	124760644	Gene ID= novel_gene_chr11_7770 TPM= 33.86 Transcript Type= NA
chr11	124765270	124767613	124765270	124767613	-	transcript7771.chr11.nnic@NA	transcript7771.chr11.nnic	NA	124765270	124767613	Gene ID= novel_gene_chr11_7772 TPM= 2.34 Transcript Type= NA
chr11	124766498	124800673	124766498	124800673	-	ENST00000239614.8@MSANTD2	ENST00000239614.8	protein_coding	124799871,124774719,124772994,124766498	124800673,124774818,124773054,124768028	Gene ID= ENSG00000120458.10 TPM= 3.5 Transcript Type= protein_coding
chr11	124766516	124800389	124766516	124800389	-	ENST00000374979.7@MSANTD2	ENST00000374979.7	protein_coding	124799871,124774719,124772994,124766516	124800389,124774974,124773054,124768028	Gene ID= ENSG00000120458.10 TPM= 1.17 Transcript Type= protein_coding
chr11	124782895	124786211	124782895	124786211	+	transcript7767.chr11.nnic@NA	transcript7767.chr11.nnic	NA	124782895	124786211	Gene ID= novel_gene_chr11_7768 TPM= 2.34 Transcript Type= NA
chr11	124876486	124881466	124876486	124881466	+	ENST00000525448.5@ROBO3	ENST00000525448.5	protein_coding	124876486,124877161,124877267,124877519,124877937,124878298,124878584,124879190,124879465,124879787,124880418,124881239	124876932,124877184,124877309,124877752,124878131,124878436,124878796,124879341,124879575,124879948,124880608,124881466	Gene ID= ENSG00000154134.14 TPM= 5.25 Transcript Type= retained_intron
chr11	124876425	124881463	124876425	124881463	+	transcript7787.chr11.nic@ROBO3	transcript7787.chr11.nic	protein_coding	124876425,124877267,124877519,124878584,124879190,124879465,124879787,124880418,124881239	124877184,124877309,124878436,124878796,124879341,124879575,124879948,124880608,124881463	Gene ID= ENSG00000154134.14 TPM= 2.92 Transcript Type= NA
chr11	124883691	124898281	124883691	124898281	-	ENST00000306534.7@ROBO4	ENST00000306534.7	protein_coding	124897726,124896932,124896513,124896198,124895785,124895457,124895081,124894201,124893860,124893688,124891666,124891299,124887733,124887358,124886977,124886464,124885041,124883691	124898281,124897261,124896670,124896318,124895912,124895685,124895193,124894369,124894045,124893730,124891802,124891562,124887840,124887499,124887213,124886822,124885247,124884913	Gene ID= ENSG00000154133.14 TPM= 16.93 Transcript Type= protein_coding
chr11	124884218	124896841	124884218	124896841	-	transcript7779.chr11.nic@ROBO4	transcript7779.chr11.nic	protein_coding	124896513,124896198,124895785,124895457,124895081,124894201,124893860,124893688,124891666,124891299,124887733,124887358,124886977,124886464,124885041,124884218	124896841,124896318,124895912,124895685,124895193,124894369,124894045,124893730,124891802,124891562,124887840,124887499,124887213,124886822,124885247,124884913	Gene ID= ENSG00000154133.14 TPM= 28.61 Transcript Type= NA
chr11	125063067	125089237	125063067	125089237	+	ENST00000403796.6@SLC37A2	ENST00000403796.6	protein_coding	125063067,125076757,125077230,125077450,125079112,125079684,125080614,125081421,125081754,125082244,125083815,125084234,125084825,125085066,125085395,125085577,125085954,125088119	125063426,125076838,125077323,125077528,125079247,125079760,125080780,125081458,125081906,125082334,125083877,125084319,125084873,125085139,125085473,125085674,125086018,125089237	Gene ID= ENSG00000134955.11 TPM= 7.59 Transcript Type= protein_coding
chr11	125063112	125090516	125063112	125090516	+	transcript7795.chr11.nnic@SLC37A2	transcript7795.chr11.nnic	protein_coding	125063112,125076757,125077450,125079112,125079684,125080614,125081421,125081754,125082244,125083815,125084234,125084825,125085066,125085395,125085577,125085954,125088119	125063426,125076838,125077528,125079247,125079760,125080780,125081458,125081906,125082334,125083877,125084319,125084873,125085139,125085473,125085674,125086018,125090516	Gene ID= ENSG00000134955.11 TPM= 33.28 Transcript Type= NA
chr11	125097035	125105041	125097035	125105041	-	ENST00000527257.1@TMEM218	ENST00000527257.1	protein_coding	125101201,125097035	125105041,125097740	Gene ID= ENSG00000150433.9 TPM= 1.17 Transcript Type= retained_intron
chr11	125164706	125433389	125164706	125433389	+	ENST00000298282.13@PKNOX2	ENST00000298282.13	protein_coding	125164706,125235045,125331819,125351284,125367846,125385551,125397874,125410196,125410779,125411746,125429012,125429963,125431166	125164776,125235115,125331925,125351392,125367985,125385722,125398062,125410325,125410876,125411865,125429088,125430141,125433389	Gene ID= ENSG00000165495.15 TPM= 14.01 Transcript Type= protein_coding
chr11	125445753	125495498	125445753	125495498	-	transcript7817.chr11.nic@FEZ1	transcript7817.chr11.nic	protein_coding	125495388,125489467,125481534,125463484,125460498,125455835,125454130,125452334,125448502,125445753	125495498,125489822,125481633,125463570,125460666,125456106,125454210,125452409,125448567,125446111	Gene ID= ENSG00000149557.12 TPM= 3.5 Transcript Type= NA
chr11	125445753	125496254	125445753	125496254	-	transcript7819.chr11.nnic@FEZ1	transcript7819.chr11.nnic	protein_coding	125496121,125489467,125481534,125463484,125460498,125455835,125454130,125452334,125448502,125445753	125496254,125489822,125481633,125463597,125460666,125456106,125454210,125452409,125448567,125446111	Gene ID= ENSG00000149557.12 TPM= 2.92 Transcript Type= NA
chr11	125445761	125496310	125445761	125496310	-	ENST00000278919.7@FEZ1	ENST00000278919.7	protein_coding	125496121,125489467,125481534,125463484,125460498,125455835,125454130,125452334,125448502,125445761	125496310,125489822,125481633,125463570,125460666,125456106,125454210,125452409,125448567,125446111	Gene ID= ENSG00000149557.12 TPM= 102.16 Transcript Type= protein_coding
chr11	125569431	125584687	125569431	125584687	+	transcript7830.chr11.nic@EI24	transcript7830.chr11.nic	protein_coding	125569431,125570104,125572458,125575263,125576255,125577504,125578133,125578949,125580093,125581211,125582346,125583521	125569573,125570190,125572569,125575408,125576315,125577570,125578257,125579068,125580204,125581322,125582420,125584687	Gene ID= ENSG00000149547.14 TPM= 5.06 Transcript Type= NA
chr11	125569216	125584687	125569216	125584687	+	ENST00000278903.10@EI24	ENST00000278903.10	protein_coding	125569216,125572458,125575263,125576255,125577504,125578133,125578949,125580093,125581211,125582346,125583521	125569573,125572569,125575408,125576315,125577570,125578257,125579068,125580204,125581322,125582420,125584687	Gene ID= ENSG00000149547.14 TPM= 49.42 Transcript Type= protein_coding
chr11	125569458	125584209	125569458	125584209	+	ENST00000618552.4@EI24	ENST00000618552.4	protein_coding	125569458,125572458,125575251,125576255,125577504,125578133,125578949,125580093,125581211,125582346,125583521	125569573,125572569,125575408,125576315,125577570,125578257,125579068,125580204,125581322,125582420,125584209	Gene ID= ENSG00000149547.14 TPM= 85.23 Transcript Type= protein_coding
chr11	125592820	125621063	125592820	125621063	+	transcript7846.chr11.nic@STT3A	transcript7846.chr11.nic	protein_coding	125592820,125595881,125597059,125602303,125602803,125604157,125605629,125606301,125608109,125609434,125611428,125612592,125612989,125614087,125614324,125618373,125620011,125620772	125592918,125596003,125597119,125602424,125602948,125604247,125605735,125606465,125608243,125609589,125611519,125612747,125613177,125614203,125614426,125618561,125620126,125621063	Gene ID= ENSG00000134910.12 TPM= 7.39 Transcript Type= NA
chr11	125592795	125623091	125592795	125623091	+	ENST00000392708.8@STT3A	ENST00000392708.8	protein_coding	125592795,125595881,125597059,125602303,125602803,125604157,125605629,125606301,125608109,125609434,125611428,125612592,125612989,125614087,125614324,125618373,125620011,125620772	125592918,125596003,125597119,125602424,125602948,125604247,125605735,125606465,125608289,125609589,125611519,125612747,125613177,125614203,125614426,125618561,125620126,125623091	Gene ID= ENSG00000134910.12 TPM= 142.25 Transcript Type= protein_coding
chr11	125625136	125657145	125625136	125657145	+	ENST00000438015.5@CHEK1	ENST00000438015.5	protein_coding	125625136,125626749,125627607,125629232,125629391,125633163,125635429,125637449,125643792,125644091,125644512,125653746,125655225	125626012,125626833,125627830,125629296,125629460,125633351,125635533,125637544,125643900,125644268,125644643,125653847,125657145	Gene ID= ENSG00000149554.12 TPM= 5.84 Transcript Type= protein_coding
chr11	125887060	125900648	125887060	125900648	+	ENST00000425380.6@HYLS1	ENST00000425380.6	protein_coding	125887060,125891423,125899344	125887765,125891472,125900648	Gene ID= ENSG00000198331.10 TPM= 3.5 Transcript Type= protein_coding
chr11	125893486	125903221	125893486	125903221	-	ENST00000227474.7@PUS3	ENST00000227474.7	protein_coding	125903170,125895907,125895224,125893486	125903221,125896330,125895789,125894286	Gene ID= ENSG00000110060.8 TPM= 2.92 Transcript Type= protein_coding
chr11	125893485	125903206	125893485	125903206	-	transcript7868.chr11.nnic@PUS3	transcript7868.chr11.nnic	protein_coding	125903170,125895907,125895670,125893485	125903206,125896330,125895789,125894286	Gene ID= ENSG00000110060.8 TPM= 3.5 Transcript Type= NA
chr11	125893486	125903221	125893486	125903221	-	ENST00000613398.4@PUS3	ENST00000613398.4	protein_coding	125903170,125895224,125893486	125903221,125895789,125894286	Gene ID= ENSG00000110060.8 TPM= 1.75 Transcript Type= protein_coding
chr11	125957452	126062831	125957452	126062831	-	transcript7874.chr11.nic@CDON	transcript7874.chr11.nic	protein_coding	126062579,126023401,126021248,126019619,126018330,126017088,126015241,126010341,126005759,126003902,126001719,125997207,125994871,125994284,125989637,125983872,125981049,125978304,125961724,125957452	126062831,126023537,126021520,126019765,126018473,126017375,126015510,126010694,126006057,126004076,126001850,125997410,125995052,125994389,125989759,125984093,125981329,125978383,125961998,125961105	Gene ID= ENSG00000064309.14 TPM= 3.5 Transcript Type= NA
chr11	126202094	126211692	126202094	126211692	-	ENST00000298317.8@RPUSD4	ENST00000298317.8	protein_coding	126211450,126210890,126209521,126205688,126205468,126204231,126202094	126211692,126211055,126209722,126205781,126205612,126204328,126203657	Gene ID= ENSG00000165526.8 TPM= 10.51 Transcript Type= protein_coding
chr11	126211414	126262986	126211414	126262986	+	ENST00000533050.5@FAM118B	ENST00000533050.5	protein_coding	126211414,126229225,126234995,126240792,126250506,126254305,126256567,126261425,126262120	126211830,126229293,126235087,126241044,126250733,126254433,126256852,126261484,126262986	Gene ID= ENSG00000197798.8 TPM= 1.17 Transcript Type= protein_coding
chr11	126211773	126262631	126211773	126262631	+	ENST00000360194.8@FAM118B	ENST00000360194.8	protein_coding	126211773,126234995,126240792,126250506,126254305,126256567,126261428,126262120	126211830,126235087,126241044,126250733,126254433,126256852,126261484,126262631	Gene ID= ENSG00000197798.8 TPM= 1.17 Transcript Type= protein_coding
chr11	126255151	126268930	126255151	126268930	-	transcript7884.chr11.nnic@SRPRA	transcript7884.chr11.nnic	protein_coding	126268688,126268003,126267549,126267175,126266763,126266476,126266187,126265963,126265737,126265268,126264959,126264376,126264096,126255151	126268930,126268086,126267712,126267335,126266922,126266629,126266278,126266081,126265823,126265440,126265172,126264539,126264289,126256870	Gene ID= ENSG00000182934.11 TPM= 9.92 Transcript Type= NA
chr11	126262919	126268959	126262919	126268959	-	ENST00000332118.10@SRPRA	ENST00000332118.10	protein_coding	126268688,126268003,126267549,126267175,126266763,126266476,126266187,126265963,126265737,126265268,126264959,126264376,126264191,126262919	126268959,126268086,126267712,126267335,126266922,126266629,126266278,126266081,126265823,126265440,126265172,126264539,126264289,126264044	Gene ID= ENSG00000182934.11 TPM= 84.65 Transcript Type= protein_coding
chr11	126269133	126278124	126269133	126278124	+	ENST00000263578.9@FOXRED1	ENST00000263578.9	protein_coding	126269133,126271437,126272969,126273336,126274927,126275327,126275794,126276059,126276394,126277071,126277435	126269291,126271657,126273079,126273454,126275021,126275428,126275870,126276219,126276523,126277175,126278124	Gene ID= ENSG00000110074.10 TPM= 11.68 Transcript Type= protein_coding
chr11	126283050	126293244	126283050	126293244	+	transcript7923.chr11.nic@TIRAP	transcript7923.chr11.nic	protein_coding	126283050,126290462,126290803,126292477	126283153,126290585,126290961,126293244	Gene ID= ENSG00000150455.13 TPM= 2.34 Transcript Type= NA
chr11	126283110	126293244	126283110	126293244	+	ENST00000392678.7@TIRAP	ENST00000392678.7	protein_coding	126283110,126289665,126290462,126290803,126292477	126283153,126289833,126290585,126290961,126293244	Gene ID= ENSG00000150455.13 TPM= 2.34 Transcript Type= protein_coding
chr11	126303752	126345749	126303752	126345749	+	ENST00000263579.4@DCPS	ENST00000263579.4	protein_coding	126303752,126306570,126331405,126338286,126343307,126345347	126304281,126306744,126331550,126338399,126343417,126345749	Gene ID= ENSG00000110063.8 TPM= 15.18 Transcript Type= protein_coding
chr11	126309026	126310842	126309026	126310842	-	transcript7934.chr11.nnic@NA	transcript7934.chr11.nnic	NA	126309026	126310842	Gene ID= novel_gene_chr11_7935 TPM= 2.34 Transcript Type= NA
chr11	126340889	126355579	126340889	126355579	-	ENST00000629441.1@GSEC	ENST00000629441.1	antisense_RNA	126355442,126340889	126355579,126342322	Gene ID= ENSG00000280832.1 TPM= 3.5 Transcript Type= antisense_RNA
chr11	126355631	126414638	126355631	126414638	+	transcript7944.chr11.nic@ST3GAL4	transcript7944.chr11.nic	protein_coding	126355631,126406096,126406473,126406943,126407234,126407574,126408099,126408307,126409268,126413505,126413961	126355842,126406171,126406557,126407023,126407349,126407634,126408194,126408496,126409411,126413648,126414638	Gene ID= ENSG00000110080.18 TPM= 4.09 Transcript Type= NA
chr11	126355631	126442290	126355631	126442290	+	transcript7946.chr11.nnic@ST3GAL4	transcript7946.chr11.nnic	protein_coding	126355631,126406096,126406473,126406943,126407252,126407574,126408099,126408307,126409268,126413505,126440186	126355842,126406171,126406557,126407023,126407349,126407634,126408194,126408496,126409411,126413648,126442290	Gene ID= ENSG00000110080.18 TPM= 2.34 Transcript Type= NA
chr11	126355724	126442290	126355724	126442290	+	transcript7952.chr11.nic@ST3GAL4	transcript7952.chr11.nic	protein_coding	126355724,126406096,126406473,126406943,126407252,126407574,126408099,126408307,126409268,126440186	126355842,126406171,126406545,126407023,126407349,126407634,126408194,126408496,126409411,126442290	Gene ID= ENSG00000110080.18 TPM= 2.34 Transcript Type= NA
chr11	126355660	126414604	126355660	126414604	+	ENST00000227495.10@ST3GAL4	ENST00000227495.10	protein_coding	126355660,126406096,126406473,126406943,126407252,126407574,126408099,126408307,126409268,126413505,126413961	126355842,126406171,126406545,126407023,126407349,126407634,126408194,126408496,126409411,126413648,126414604	Gene ID= ENSG00000110080.18 TPM= 9.34 Transcript Type= protein_coding
chr11	126355684	126414638	126355684	126414638	+	ENST00000444328.6@ST3GAL4	ENST00000444328.6	protein_coding	126355684,126406096,126406473,126406943,126407252,126407574,126408099,126408307,126409268,126413505,126413961	126355842,126406171,126406557,126407023,126407349,126407634,126408194,126408496,126409411,126413648,126414638	Gene ID= ENSG00000110080.18 TPM= 37.95 Transcript Type= protein_coding
chr11	126355688	126359309	126355688	126359309	+	transcript7959.chr11.nnic@NA	transcript7959.chr11.nnic	NA	126355688	126359309	Gene ID= novel_gene_chr11_7960 TPM= 5.84 Transcript Type= NA
chr11	128458765	128522331	128458765	128522331	-	transcript7961.chr11.nnic@ETS1	transcript7961.chr11.nnic	protein_coding	128521913,128497573,128490457,128489290,128486069,128484823,128480191,128463509,128458765	128522331,128497674,128490576,128489490,128486146,128485071,128480451,128463627,128462576	Gene ID= ENSG00000134954.14 TPM= 32.69 Transcript Type= NA
chr11	128461766	128522304	128461766	128522304	-	ENST00000319397.6@ETS1	ENST00000319397.6	protein_coding	128521913,128490457,128489290,128486069,128484823,128480191,128463509,128461766	128522304,128490576,128489490,128486146,128485071,128480451,128463627,128462576	Gene ID= ENSG00000134954.14 TPM= 4.67 Transcript Type= protein_coding
chr11	128693931	128812416	128693931	128812416	+	transcript7970.chr11.nnic@FLI1	transcript7970.chr11.nnic	protein_coding	128693931,128693967,128758115,128768118,128772782,128781958,128805366,128807180,128809157,128810459	128693946,128694276,128758326,128768272,128772985,128782023,128805431,128807239,128809204,128812416	Gene ID= ENSG00000151702.16 TPM= 3.74 Transcript Type= NA
chr11	128692934	128812416	128692934	128812416	+	transcript7973.chr11.nic@FLI1	transcript7973.chr11.nic	protein_coding	128692934,128758115,128768118,128772782,128781958,128805366,128807180,128809157,128810459	128693143,128758326,128768272,128772985,128782023,128805431,128807239,128809204,128812416	Gene ID= ENSG00000151702.16 TPM= 3.74 Transcript Type= NA
chr11	128693770	128813267	128693770	128813267	+	ENST00000527786.6@FLI1	ENST00000527786.6	protein_coding	128693770,128758115,128768118,128772782,128781958,128805366,128807180,128809157,128810459	128694276,128758326,128768272,128772985,128782023,128805431,128807239,128809204,128813267	Gene ID= ENSG00000151702.16 TPM= 21.25 Transcript Type= protein_coding
chr11	128693853	128812416	128693853	128812416	+	transcript7975.chr11.nnic@FLI1	transcript7975.chr11.nnic	protein_coding	128693853,128758115,128768118,128772782,128781958,128809157,128810459	128694276,128758326,128768272,128772985,128782023,128809204,128812416	Gene ID= ENSG00000151702.16 TPM= 2.57 Transcript Type= NA
chr11	128694088	128812417	128694088	128812417	+	ENST00000429175.7@FLI1	ENST00000429175.7	protein_coding	128694088,128758115,128764651,128768118,128772782,128781958,128805366,128807180,128809157,128810459	128694276,128758326,128764821,128768272,128772985,128782023,128805431,128807239,128809204,128812417	Gene ID= ENSG00000151702.16 TPM= 7.24 Transcript Type= nonsense_mediated_decay
chr11	128691672	128696023	128691672	128696023	-	ENST00000526269.2@SENCR	ENST00000526269.2	antisense_RNA	128695913,128692655,128691672	128696023,128693391,128692121	Gene ID= ENSG00000254703.2 TPM= 1.17 Transcript Type= antisense_RNA
chr11	128698010	128702877	128698010	128702877	+	transcript7978.chr11.nnic@NA	transcript7978.chr11.nnic	NA	128698010	128702877	Gene ID= novel_gene_chr11_7979 TPM= 4.67 Transcript Type= NA
chr11	128743345	128745444	128743345	128745444	-	transcript7982.chr11.nnic@NA	transcript7982.chr11.nnic	NA	128743345	128745444	Gene ID= novel_gene_chr11_7983 TPM= 2.34 Transcript Type= NA
chr11	128891356	128921035	128891356	128921035	+	ENST00000529694.5@KCNJ5	ENST00000529694.5	protein_coding	128891356,128911264,128916409	128891721,128912210,128921035	Gene ID= ENSG00000120457.11 TPM= 3.5 Transcript Type= protein_coding
chr11	128899565	128906225	128899565	128906225	-	transcript7992.chr11.nnic@C11orf45	transcript7992.chr11.nnic	protein_coding	128906149,128904431,128903367,128899565	128906225,128904611,128903511,128902713	Gene ID= ENSG00000174370.9 TPM= 2.34 Transcript Type= NA
chr11	128899565	128905697	128899565	128905697	-	ENST00000310799.7@C11orf45	ENST00000310799.7	protein_coding	128905549,128904431,128903367,128899565	128905697,128904611,128903511,128902713	Gene ID= ENSG00000174370.9 TPM= 1.17 Transcript Type= protein_coding
chr11	129233779	129279509	129233779	129279509	-	transcript8000.chr11.nnic@ARHGAP32	transcript8000.chr11.nnic	protein_coding	129279146,129233779	129279509,129237248	Gene ID= ENSG00000134909.18 TPM= 3.5 Transcript Type= NA
chr11	129815819	129860003	129815819	129860003	+	ENST00000281441.7@TMEM45B	ENST00000281441.7	protein_coding	129815819,129852475,129854610,129855708,129857313,129858574	129815898,129852660,129854816,129855892,129857458,129860003	Gene ID= ENSG00000151715.7 TPM= 1.17 Transcript Type= protein_coding
chr11	129815817	129855575	129815817	129855575	+	transcript8009.chr11.nic@TMEM45B	transcript8009.chr11.nic	protein_coding	129815817,129852475,129854610	129815898,129852660,129855575	Gene ID= ENSG00000151715.7 TPM= 2.34 Transcript Type= NA
chr11	129863783	129895586	129863783	129895586	-	transcript8017.chr11.nic@NFRKB	transcript8017.chr11.nic	protein_coding	129895496,129894359,129892715,129888594,129886317,129885435,129884745,129884070,129883122,129882451,129882086,129881727,129881443,129878464,129878309,129877325,129876721,129875357,129874793,129874501,129874113,129873745,129872884,129869494,129865877,129864966,129863783	129895586,129894438,129892870,129888795,129886444,129885609,129884846,129884143,129883206,129882631,129882194,129881853,129881508,129878543,129878355,129877385,129876895,129875463,129874916,129874580,129874333,129874015,129873096,129870261,129865983,129865101,129864850	Gene ID= ENSG00000170322.14 TPM= 8.17 Transcript Type= NA
chr11	129899715	130002835	129899715	130002835	-	ENST00000360871.7@PRDM10	ENST00000360871.7	protein_coding	130002722,129960896,129957746,129955512,129947145,129944771,129942426,129937598,129935101,129932102,129931016,129924882,129923248,129918539,129917127,129915660,129914704,129912085,129910476,129905638,129899715	130002835,129961082,129957910,129955571,129947370,129945012,129942629,129937670,129935218,129932231,129931258,129925229,129923403,129918718,129917237,129915860,129915018,129912225,129910656,129905741,129902516	Gene ID= ENSG00000170325.14 TPM= 9.34 Transcript Type= protein_coding
chr11	130069828	130144804	130069828	130144804	+	transcript8050.chr11.nic@APLP2	transcript8050.chr11.nic	protein_coding	130069828,130109429,130110538,130120706,130121614,130122305,130126700,130127766,130129048,130130038,130133629,130135563,130137256,130140398,130141498,130141919,130143347	130070082,130109602,130110661,130120818,130121810,130122513,130126830,130127840,130129206,130130166,130133728,130135715,130137291,130140483,130141572,130142074,130144804	Gene ID= ENSG00000084234.16 TPM= 63.48 Transcript Type= NA
chr11	130069894	130143806	130069894	130143806	+	ENST00000528499.5@APLP2	ENST00000528499.5	protein_coding	130069894,130109429,130110538,130120706,130121614,130122305,130126700,130127766,130129048,130130038,130133629,130135563,130140398,130141498,130141919,130143347	130070082,130109602,130110661,130120818,130121810,130122513,130126830,130127840,130129206,130130166,130133728,130135715,130140483,130141572,130142074,130143806	Gene ID= ENSG00000084234.16 TPM= 52.54 Transcript Type= protein_coding
chr11	130069906	130144811	130069906	130144811	+	ENST00000263574.9@APLP2	ENST00000263574.9	protein_coding	130069906,130109429,130110538,130120706,130121614,130122305,130123612,130126700,130127766,130129048,130130038,130133629,130135563,130137256,130140398,130141498,130141919,130143347	130070082,130109602,130110661,130120818,130121810,130122513,130123779,130126830,130127840,130129206,130130166,130133728,130135715,130137291,130140483,130141572,130142074,130144811	Gene ID= ENSG00000084234.16 TPM= 145.69 Transcript Type= protein_coding
chr11	130159562	130210376	130159562	130210376	+	ENST00000278742.5@ST14	ENST00000278742.5	protein_coding	130159562,130188114,130188530,130188869,130189739,130190113,130190454,130194149,130194640,130196339,130196570,130197841,130198308,130198508,130198947,130199951,130208410,130209442,130209662	130160060,130188273,130188657,130188939,130189896,130190148,130190694,130194288,130194737,130196448,130196700,130197945,130198418,130198621,130199069,130200137,130208684,130209578,130210376	Gene ID= ENSG00000149418.10 TPM= 333.35 Transcript Type= protein_coding
chr11	130167731	130170964	130167731	130170964	-	transcript8083.chr11.nnic@NA	transcript8083.chr11.nnic	NA	130167731	130170964	Gene ID= novel_gene_chr11_8084 TPM= 2.34 Transcript Type= NA
chr11	130404923	130428608	130404923	130428608	-	transcript8089.chr11.nnic@ADAMTS8	transcript8089.chr11.nnic	protein_coding	130427567,130419053,130416940,130416163,130414531,130411417,130408768,130408464,130405211,130404923	130428608,130419292,130417075,130416330,130414832,130411600,130408940,130408639,130406128,130405163	Gene ID= ENSG00000134917.9 TPM= 5.35 Transcript Type= NA
chr11	130404925	130428522	130404925	130428522	-	transcript8092.chr11.nnic@ADAMTS8	transcript8092.chr11.nnic	protein_coding	130427567,130419053,130416940,130416163,130414531,130411417,130408768,130408464,130404925	130428522,130419292,130417075,130416330,130414784,130411600,130408940,130408639,130406128	Gene ID= ENSG00000134917.9 TPM= 8.47 Transcript Type= NA
chr11	130404925	130428993	130404925	130428993	-	ENST00000257359.6@ADAMTS8	ENST00000257359.6	protein_coding	130427567,130419053,130416940,130416163,130414531,130411417,130408768,130408464,130404925	130428993,130419292,130417075,130416330,130414832,130411600,130408940,130408639,130406128	Gene ID= ENSG00000134917.9 TPM= 131.45 Transcript Type= protein_coding
chr11	130448645	130464997	130448645	130464997	+	transcript8104.chr11.nic@ADAMTS15	transcript8104.chr11.nic	protein_coding	130448645,130461489,130462087,130462497	130449930,130461621,130462254,130464997	Gene ID= ENSG00000166106.3 TPM= 2.34 Transcript Type= NA
chr11	130876984	130916479	130876984	130916479	-	transcript8109.chr11.nnic@SNX19	transcript8109.chr11.nnic	protein_coding	130914266,130911633,130910270,130910018,130907953,130906625,130905953,130903255,130894986,130894603,130880622,130879624,130876984	130916479,130911771,130910370,130910137,130908083,130906721,130906133,130903384,130895156,130894669,130880806,130879711,130878554	Gene ID= ENSG00000120451.10 TPM= 6.71 Transcript Type= NA
chr11	130875436	130916509	130875436	130916509	-	ENST00000265909.8@SNX19	ENST00000265909.8	protein_coding	130914266,130911633,130910270,130910018,130907953,130906625,130905953,130903255,130880622,130879624,130875436	130916509,130911771,130910370,130910137,130908083,130906721,130906133,130903384,130880806,130879711,130878554	Gene ID= ENSG00000120451.10 TPM= 13.14 Transcript Type= protein_coding
chr11	130875879	130916479	130875879	130916479	-	transcript8119.chr11.nic@SNX19	transcript8119.chr11.nic	protein_coding	130914266,130911633,130910270,130910018,130907953,130906625,130905953,130903255,130879624,130875879	130916479,130911771,130910370,130910137,130908083,130906721,130906133,130903384,130879711,130878554	Gene ID= ENSG00000120451.10 TPM= 9.63 Transcript Type= NA
chr11	130908190	130911208	130908190	130911208	+	transcript8125.chr11.nnic@NA	transcript8125.chr11.nnic	NA	130908190	130911208	Gene ID= novel_gene_chr11_8126 TPM= 8.17 Transcript Type= NA
chr11	134068925	134152001	134068925	134152001	+	ENST00000299106.8@JAM3	ENST00000299106.8	protein_coding	134068925,134139851,134140657,134144241,134144792,134145946,134148547,134148764,134149146	134069159,134139916,134140770,134144393,134144994,134146045,134148676,134148818,134152001	Gene ID= ENSG00000166086.12 TPM= 94.58 Transcript Type= protein_coding
chr11	134220188	134224545	134220188	134224545	-	transcript8136.chr11.nic@NCAPD3	transcript8136.chr11.nic	protein_coding	134223863,134220188	134224545,134220726	Gene ID= ENSG00000151503.12 TPM= 2.34 Transcript Type= NA
chr11	134152445	134223991	134152445	134223991	-	ENST00000534548.6@NCAPD3	ENST00000534548.6	protein_coding	134223863,134220572,134216936,134210270,134209313,134209145,134208864,134206599,134204899,134204046,134203654,134203142,134202816,134194665,134194016,134192689,134185335,134184903,134184637,134181077,134178822,134178634,134177219,134176307,134168917,134168469,134167996,134161781,134159892,134158329,134157928,134157018,134153289,134153140,134152445	134223991,134220726,134217098,134210454,134209477,134209206,134208951,134206732,134204971,134204171,134203906,134203198,134202905,134194738,134194150,134192909,134185526,134185000,134184752,134181184,134178936,134178741,134177457,134176386,134169054,134168602,134168195,134161891,134160074,134158495,134158067,134157095,134153363,134153200,134153052	Gene ID= ENSG00000151503.12 TPM= 5.84 Transcript Type= protein_coding
chr11	134224619	134245729	134224619	134245729	+	transcript8145.chr11.nic@VPS26B	transcript8145.chr11.nic	protein_coding	134224619,134224800,134234897,134239991,134243119,134245444	134224761,134225345,134235053,134240155,134245080,134245729	Gene ID= ENSG00000151502.10 TPM= 4.67 Transcript Type= NA
chr11	134224645	134247792	134224645	134247792	+	ENST00000281187.9@VPS26B	ENST00000281187.9	protein_coding	134224645,134234897,134239991,134243119,134244938,134245444	134225345,134235053,134240155,134243294,134245080,134247792	Gene ID= ENSG00000151502.10 TPM= 145.95 Transcript Type= protein_coding
chr11	134224677	134245729	134224677	134245729	+	ENST00000525095.2@VPS26B	ENST00000525095.2	protein_coding	134224677,134224800,134234897,134239991,134243119,134244938,134245444	134224761,134225345,134235053,134240155,134243294,134245080,134245729	Gene ID= ENSG00000151502.10 TPM= 46.7 Transcript Type= protein_coding
chr11	134248279	134253370	134248279	134253370	-	ENST00000392594.7@THYN1	ENST00000392594.7	protein_coding	134253299,134252840,134251130,134250275,134249828,134249167,134248809,134248279	134253370,134252916,134251308,134250343,134249920,134249262,134248959,134248484	Gene ID= ENSG00000151500.14 TPM= 21.4 Transcript Type= protein_coding
chr11	134248288	134253364	134248288	134253364	-	transcript8157.chr11.nic@THYN1	transcript8157.chr11.nic	protein_coding	134252840,134251130,134250275,134249828,134249167,134248288	134253364,134251308,134250343,134249920,134249262,134248484	Gene ID= ENSG00000151500.14 TPM= 6.22 Transcript Type= NA
chr11	134248279	134253344	134248279	134253344	-	ENST00000341541.7@THYN1	ENST00000341541.7	protein_coding	134252840,134251130,134250275,134249828,134249167,134248809,134248279	134253344,134251308,134250343,134249920,134249262,134248959,134248484	Gene ID= ENSG00000151500.14 TPM= 12.84 Transcript Type= protein_coding
chr11	134248288	134253350	134248288	134253350	-	ENST00000352327.5@THYN1	ENST00000352327.5	protein_coding	134253227,134252840,134251130,134250275,134249828,134249167,134248288	134253350,134252916,134251308,134250343,134249920,134249262,134248484	Gene ID= ENSG00000151500.14 TPM= 1.55 Transcript Type= protein_coding
chr11	134253495	134265855	134253495	134265855	+	ENST00000281182.8@ACAD8	ENST00000281182.8	protein_coding	134253495,134256548,134257088,134258515,134259008,134259608,134261044,134261275,134261738,134262520,134264908	134253709,134256648,134257257,134258624,134259084,134259745,134261179,134261372,134261890,134262622,134265855	Gene ID= ENSG00000151498.11 TPM= 48.26 Transcript Type= protein_coding
chr11	134253534	134263100	134253534	134263100	+	transcript8168.chr11.nic@ACAD8	transcript8168.chr11.nic	protein_coding	134253534,134256548,134257088,134258515,134259008,134259608,134261044,134261275,134261738,134262520,134262770	134253709,134256648,134257257,134258624,134259084,134259745,134261179,134261372,134261890,134262622,134263100	Gene ID= ENSG00000151498.11 TPM= 3.5 Transcript Type= NA
chr11	134253534	134265855	134253534	134265855	+	transcript8179.chr11.nic@ACAD8	transcript8179.chr11.nic	protein_coding	134253534,134256548,134257088,134258515,134259008,134259608,134261275,134261738,134262520,134264908	134253709,134256648,134257257,134258624,134259084,134261179,134261372,134261890,134262622,134265855	Gene ID= ENSG00000151498.11 TPM= 9.92 Transcript Type= NA
chr11	134253534	134265855	134253534	134265855	+	transcript8181.chr11.nic@ACAD8	transcript8181.chr11.nic	protein_coding	134253534,134256548,134258515,134259008,134259608,134261044,134261275,134261738,134262520,134264908	134253709,134256648,134258624,134259084,134259745,134261179,134261372,134261890,134262622,134265855	Gene ID= ENSG00000151498.11 TPM= 3.89 Transcript Type= NA
chr11	134253534	134265855	134253534	134265855	+	transcript8186.chr11.nic@ACAD8	transcript8186.chr11.nic	protein_coding	134253534,134256548,134258515,134259008,134259608,134261275,134261738,134262520,134264908	134253709,134256648,134258624,134259084,134261179,134261372,134261890,134262622,134265855	Gene ID= ENSG00000151498.11 TPM= 5.25 Transcript Type= NA
chr11	134253561	134265850	134253561	134265850	+	ENST00000374752.6@ACAD8	ENST00000374752.6	protein_coding	134253561,134259008,134259608,134261044,134261275,134261738,134262520,134264908	134253709,134259084,134259745,134261179,134261372,134261890,134262622,134265850	Gene ID= ENSG00000151498.11 TPM= 5.06 Transcript Type= protein_coding
chr11	134331883	134376322	134331883	134376322	+	transcript8194.chr11.nnic@GLB1L2	transcript8194.chr11.nnic	protein_coding	134331883,134342754,134344387,134345034,134347325,134356301,134359060,134364328,134367257,134368644,134369805,134370293,134371008,134371421,134371752,134373721,134374145,134374602,134374972,134375942	134332147,134342951,134344455,134345129,134347433,134356393,134359141,134364398,134367341,134368781,134369885,134370399,134371148,134371492,134371830,134373808,134374256,134374718,134375801,134376322	Gene ID= ENSG00000149328.14 TPM= 5.84 Transcript Type= NA
chr11	134331874	134376324	134331874	134376324	+	ENST00000535456.6@GLB1L2	ENST00000535456.6	protein_coding	134331874,134342754,134344387,134345034,134347325,134356301,134359060,134364328,134367257,134368644,134369805,134370293,134371008,134371421,134371752,134373721,134374145,134374602,134374972	134332147,134342951,134344455,134345129,134347433,134356393,134359141,134364398,134367341,134368781,134369885,134370399,134371148,134371492,134371830,134373808,134374256,134374718,134376324	Gene ID= ENSG00000149328.14 TPM= 7.01 Transcript Type= protein_coding
chr12	14522	31415	14522	31415	-	transcript7.chr12.nnic@AC215219.1	transcript7.chr12.nnic	unprocessed_pseudogene	31375,26801,18373,18037,17348,16969,16722,15913,15085,14522	31415,26954,18471,18183,17859,17170,16880,16065,15153,14944	Gene ID= ENSG00000226210.3 TPM= 22.18 Transcript Type= NA
chr12	14522	20770	14522	20770	-	transcript16.chr12.nic@AC215219.1	transcript16.chr12.nic	unprocessed_pseudogene	18373,18037,17348,16969,16722,15913,15085,14522	20770,18183,17859,17170,16880,16065,15153,14944	Gene ID= ENSG00000226210.3 TPM= 5.84 Transcript Type= NA
chr12	106524	111850	106524	111850	-	ENST00000540226.1@AC026369.3	ENST00000540226.1	antisense_RNA	111619,106524	111850,106877	Gene ID= ENSG00000256948.1 TPM= 9.34 Transcript Type= antisense_RNA
chr12	190077	213697	190077	213697	-	ENST00000359674.8@SLC6A12	ENST00000359674.8	protein_coding	213511,212026,209773,204564,202740,201762,200651,198797,197900,197377,196770,196124,195225,193277,192478,190077	213697,212110,210043,204698,202880,201849,200783,198931,198003,197501,196882,196261,195327,193377,192648,191211	Gene ID= ENSG00000111181.12 TPM= 8.17 Transcript Type= protein_coding
chr12	190077	214218	190077	214218	-	transcript29.chr12.nic@SLC6A12	transcript29.chr12.nic	protein_coding	213922,212026,209773,204564,202740,201762,200651,198797,197900,197377,196770,196124,195225,193277,192478,190077	214218,212110,210043,204698,202880,201849,200783,198931,198003,197501,196882,196261,195327,193377,192648,191211	Gene ID= ENSG00000111181.12 TPM= 7.01 Transcript Type= NA
chr12	220621	262873	220621	262873	-	ENST00000445055.6@SLC6A13	ENST00000445055.6	protein_coding	262789,259851,237926,237158,235090,227565,226390,224401,223992,223132,222532,221376,220621	262873,260057,238010,237290,235224,227668,226514,224513,224129,223234,222632,221546,221070	Gene ID= ENSG00000010379.15 TPM= 1.17 Transcript Type= protein_coding
chr12	220625	262836	220625	262836	-	ENST00000343164.8@SLC6A13	ENST00000343164.8	protein_coding	262789,259851,243679,242614,237926,237158,235090,227565,226390,224401,223992,223132,222532,221376,220625	262836,260057,243813,242754,238010,237290,235224,227668,226514,224513,224129,223234,222632,221546,221070	Gene ID= ENSG00000010379.15 TPM= 2.34 Transcript Type= protein_coding
chr12	292954	389570	292954	389570	-	transcript39.chr12.nic@KDM5A	transcript39.chr12.nic	protein_coding	388927,385897,384031,365934,362963,356432,355158,354076,352205,350621,334241,333487,331819,328835,323600,323082,322417,320995,318106,313056,310885,309803,307454,306946,297041,295573,292954	389570,385974,384153,366104,363097,356537,355249,354234,352324,350779,334422,333649,331938,329029,323781,323206,322567,321109,318461,313194,311064,309964,308005,307089,297200,295793,293169	Gene ID= ENSG00000073614.12 TPM= 12.84 Transcript Type= NA
chr12	327022	352130	327022	352130	-	transcript45.chr12.nic@KDM5A	transcript45.chr12.nic	protein_coding	350621,334241,333487,327022	352130,334422,333649,331938	Gene ID= ENSG00000073614.12 TPM= 3.5 Transcript Type= NA
chr12	283812	285014	283812	285014	-	transcript48.chr12.nnic@NA	transcript48.chr12.nnic	NA	283812	285014	Gene ID= novel_gene_chr12_49 TPM= 2.34 Transcript Type= NA
chr12	459976	563509	459976	563509	+	transcript51.chr12.nic@B4GALNT3	transcript51.chr12.nic	protein_coding	459976,535166,536218,544339,544882,545369,546646,548024,548231,549769,550922,552063,552467,553191,556547,557608,558016,558508,559295,561343	460545,535269,536295,544434,544972,545469,546713,548102,548297,549912,551031,552163,552528,553983,556866,557761,558088,558661,559421,563509	Gene ID= ENSG00000139044.10 TPM= 22.18 Transcript Type= NA
chr12	500867	504455	500867	504455	-	transcript56.chr12.nnic@NA	transcript56.chr12.nnic	NA	500867	504455	Gene ID= novel_gene_chr12_57 TPM= 4.67 Transcript Type= NA
chr12	564296	643636	564296	643636	-	transcript59.chr12.nnic@NINJ2	transcript59.chr12.nnic	protein_coding	643511,641360,565950,565217,564296	643636,641490,566178,565401,564681	Gene ID= ENSG00000171840.11 TPM= 2.34 Transcript Type= NA
chr12	642981	645415	642981	645415	+	ENST00000318291.4@AC021054.1	ENST00000318291.4	antisense_RNA	642981,643959	643717,645415	Gene ID= ENSG00000177406.4 TPM= 23.35 Transcript Type= antisense_RNA
chr12	642691	645876	642691	645876	+	transcript67.chr12.nnic@NA	transcript67.chr12.nnic	NA	642691	645876	Gene ID= novel_gene_chr12_68 TPM= 22.18 Transcript Type= NA
chr12	752557	859375	752557	859375	+	transcript80.chr12.nic@WNK1	transcript80.chr12.nic	protein_coding	752557,813642,827042,830003,857161,859245	754324,813814,827262,830160,857249,859375	Gene ID= ENSG00000060237.16 TPM= 3.5 Transcript Type= NA
chr12	752593	911300	752593	911300	+	ENST00000535572.5@WNK1	ENST00000535572.5	protein_coding	752593,813642,827042,830003,857161,859245,861013,862083,871265,878215,881692,881911,882943,883395,883774,884121,884649,887221,889140,890453,894562,896071,897479,900476,907847,908475	754324,813814,827262,830160,857249,859464,861343,862270,871348,878361,881789,882073,883059,883568,883831,884243,886084,887304,889223,890510,894635,896732,897681,900670,908034,911300	Gene ID= ENSG00000060237.16 TPM= 42.03 Transcript Type= protein_coding
chr12	753056	827501	753056	827501	+	ENST00000447667.2@WNK1	ENST00000447667.2	protein_coding	753056,813642,827042	754324,813814,827501	Gene ID= ENSG00000060237.16 TPM= 11.68 Transcript Type= protein_coding
chr12	911022	912021	911022	912021	-	transcript87.chr12.nnic@NA	transcript87.chr12.nnic	NA	911022	912021	Gene ID= novel_gene_chr12_88 TPM= 2.34 Transcript Type= NA
chr12	912077	949722	912077	949722	-	ENST00000358495.7@RAD52	ENST00000358495.7	protein_coding	949602,932975,931220,930051,929819,927145,925450,916639,916344,914431,913894,912077	949722,933076,931321,930144,929886,927263,925525,916820,916483,914532,914121,913452	Gene ID= ENSG00000002016.17 TPM= 2.34 Transcript Type= protein_coding
chr12	912495	929150	912495	929150	-	transcript76.chr12.nnic@RAD52	transcript76.chr12.nnic	protein_coding	929006,927145,926796,925450,916639,916344,914411,913894,912495	929150,928893,926946,925525,916820,916483,914532,914121,913452	Gene ID= ENSG00000002016.17 TPM= 2.34 Transcript Type= NA
chr12	991208	1495933	991208	1495933	+	ENST00000543086.7@ERC1	ENST00000543086.7	protein_coding	991208,1027748,1083164,1104750,1110192,1115866,1141620,1180540,1181925,1183281,1189859,1236769,1263034,1289852,1371833,1408149,1444562,1490093	991322,1028572,1083580,1104824,1110347,1116033,1141787,1180677,1182065,1183421,1190052,1236904,1263165,1290012,1371977,1408247,1444750,1495933	Gene ID= ENSG00000082805.19 TPM= 21.02 Transcript Type= protein_coding
chr12	991215	1245368	991215	1245368	+	transcript96.chr12.nic@ERC1	transcript96.chr12.nic	protein_coding	991215,1027748,1083164,1104750,1110192,1112215,1115866,1141620,1180540,1181925,1183281,1189859,1236769,1244543	991322,1028572,1083580,1104824,1110347,1112298,1116033,1141787,1180677,1182065,1183421,1190052,1236904,1245368	Gene ID= ENSG00000082805.19 TPM= 4.67 Transcript Type= NA
chr12	1530260	1647211	1530260	1647211	+	transcript104.chr12.nic@WNT5B	transcript104.chr12.nic	protein_coding	1530260,1631298,1632658,1639684,1645794	1530950,1631434,1632905,1639976,1647211	Gene ID= ENSG00000111186.12 TPM= 11.68 Transcript Type= NA
chr12	1591349	1594891	1591349	1594891	-	transcript109.chr12.nnic@NA	transcript109.chr12.nnic	NA	1591349	1594891	Gene ID= novel_gene_chr12_110 TPM= 89.9 Transcript Type= NA
chr12	1691022	1788678	1691022	1788678	+	transcript123.chr12.nnic@ADIPOR2	transcript123.chr12.nnic	protein_coding	1691022,1754258,1772842,1777854,1780451,1780889,1783880,1785944	1691213,1754514,1772961,1778025,1780637,1781076,1784073,1788678	Gene ID= ENSG00000006831.9 TPM= 4.67 Transcript Type= NA
chr12	1691027	1788678	1691027	1788678	+	ENST00000357103.4@ADIPOR2	ENST00000357103.4	protein_coding	1691027,1754258,1772842,1777854,1780451,1780889,1783880,1785944	1691191,1754514,1772961,1778025,1780637,1781076,1784073,1788678	Gene ID= ENSG00000006831.9 TPM= 15.18 Transcript Type= protein_coding
chr12	1695013	1698686	1695013	1698686	-	transcript125.chr12.nnic@NA	transcript125.chr12.nnic	NA	1695013	1698686	Gene ID= novel_gene_chr12_126 TPM= 3.5 Transcript Type= NA
chr12	1756454	1759849	1756454	1759849	-	transcript127.chr12.nnic@NA	transcript127.chr12.nnic	NA	1756454	1759849	Gene ID= novel_gene_chr12_128 TPM= 9.34 Transcript Type= NA
chr12	1939627	1945417	1939627	1945417	-	transcript139.chr12.nnic@NA	transcript139.chr12.nnic	NA	1939627	1945417	Gene ID= novel_gene_chr12_140 TPM= 3.5 Transcript Type= NA
chr12	1946054	2004511	1946054	2004511	-	ENST00000280665.10@DCP1B	ENST00000280665.10	protein_coding	2004282,1997935,1993264,1967844,1965558,1955432,1952416,1949086,1946054	2004511,1997975,1993391,1967910,1965693,1955560,1953288,1949334,1946286	Gene ID= ENSG00000151065.13 TPM= 22.18 Transcript Type= protein_coding
chr12	2117214	2120697	2117214	2120697	-	transcript143.chr12.nnic@NA	transcript143.chr12.nnic	NA	2117214	2120697	Gene ID= novel_gene_chr12_144 TPM= 2.34 Transcript Type= NA
chr12	2683633	2692092	2683633	2692092	+	transcript148.chr12.nic@CACNA1C	transcript148.chr12.nic	protein_coding	2683633,2686166,2688447,2690900	2685842,2686269,2688779,2692092	Gene ID= ENSG00000151067.21 TPM= 3.5 Transcript Type= NA
chr12	2607007	2614971	2607007	2614971	+	transcript149.chr12.nic@CACNA1C	transcript149.chr12.nic	protein_coding	2607007,2610541,2611903	2608712,2610699,2614971	Gene ID= ENSG00000151067.21 TPM= 2.34 Transcript Type= NA
chr12	2795980	2803942	2795980	2803942	+	transcript168.chr12.nic@FKBP4	transcript168.chr12.nic	protein_coding	2795980,2797138,2797729,2798706,2799088,2799850,2800039,2800392,2801117,2803151	2796964,2797282,2797871,2798826,2799244,2799940,2800122,2800577,2801356,2803942	Gene ID= ENSG00000004478.7 TPM= 21.6 Transcript Type= NA
chr12	2812622	2825071	2812622	2825071	+	ENST00000228799.6@ITFG2	ENST00000228799.6	protein_coding	2812622,2817223,2817909,2818106,2820086,2820724,2821262,2821543,2821692,2822794,2823770,2824090	2812856,2817318,2817950,2818277,2820225,2820872,2821359,2821596,2821792,2822911,2823943,2825071	Gene ID= ENSG00000111203.11 TPM= 20.72 Transcript Type= protein_coding
chr12	2812666	2825066	2812666	2825066	+	transcript163.chr12.nic@ITFG2	transcript163.chr12.nic	protein_coding	2812666,2817223,2817909,2818106,2820086,2820724,2821262,2821543,2821692,2822794,2823770,2824090	2812856,2817318,2817950,2818277,2820225,2820872,2821359,2821596,2821792,2822911,2824013,2825066	Gene ID= ENSG00000111203.11 TPM= 3.21 Transcript Type= NA
chr12	2877199	2889271	2877199	2889271	+	ENST00000461997.5@RHNO1	ENST00000461997.5	protein_coding	2877199,2885283,2887911	2877282,2885492,2889271	Gene ID= ENSG00000171792.10 TPM= 1.17 Transcript Type= protein_coding
chr12	2877204	2886326	2877204	2886326	+	transcript191.chr12.nnic@RHNO1	transcript191.chr12.nnic	protein_coding	2877204,2885283,2885922	2877282,2885866,2886326	Gene ID= ENSG00000171792.10 TPM= 2.34 Transcript Type= NA
chr12	2877208	2889440	2877208	2889440	+	ENST00000464682.2@RHNO1	ENST00000464682.2	protein_coding	2877208,2887911	2877282,2889440	Gene ID= ENSG00000171792.10 TPM= 1.17 Transcript Type= processed_transcript
chr12	2877215	2889460	2877215	2889460	+	ENST00000489288.6@RHNO1	ENST00000489288.6	protein_coding	2877215,2885283,2887911	2877282,2885534,2889460	Gene ID= ENSG00000171792.10 TPM= 8.17 Transcript Type= protein_coding
chr12	2890882	2941140	2890882	2941140	+	transcript209.chr12.nic@TULP3	transcript209.chr12.nic	protein_coding	2890882,2909529,2922262,2930248,2931037,2933418,2934447,2937631,2938114,2939311	2890988,2909580,2922402,2930345,2931240,2933530,2934561,2937729,2938285,2941140	Gene ID= ENSG00000078246.16 TPM= 2.34 Transcript Type= NA
chr12	2890897	2941140	2890897	2941140	+	ENST00000448120.6@TULP3	ENST00000448120.6	protein_coding	2890897,2909529,2920763,2922262,2930248,2931037,2933418,2934447,2937631,2938114,2939311	2890988,2909580,2920922,2922402,2930345,2931240,2933530,2934561,2937729,2938285,2941140	Gene ID= ENSG00000078246.16 TPM= 1.17 Transcript Type= protein_coding
chr12	2959444	3040665	2959444	3040665	+	transcript198.chr12.nnic@TEAD4	transcript198.chr12.nnic	protein_coding	2959444,2994738,3011004,3012170,3017398,3017823,3018545,3019115,3020634,3021844,3037968,3040107,3040365	2960353,2994992,3011068,3012232,3017526,3017953,3018588,3019170,3020773,3022017,3038108,3040259,3040665	Gene ID= ENSG00000197905.8 TPM= 2.57 Transcript Type= NA
chr12	2959444	3040665	2959444	3040665	+	transcript202.chr12.nic@TEAD4	transcript202.chr12.nic	protein_coding	2959444,2994738,3011004,3012170,3017398,3018545,3019115,3020634,3021844,3037968,3040107,3040365	2960353,2994992,3011068,3012232,3017526,3018588,3019170,3020773,3022017,3038108,3040259,3040665	Gene ID= ENSG00000197905.8 TPM= 9.87 Transcript Type= NA
chr12	2959480	3040665	2959480	3040665	+	transcript203.chr12.nic@TEAD4	transcript203.chr12.nic	protein_coding	2959480,2994738,3011004,3012170,3017398,3018545,3019115,3020634,3021844,3037968,3040107,3040365	2960040,2994992,3011068,3012232,3017526,3018588,3019170,3020773,3022017,3038108,3040259,3040665	Gene ID= ENSG00000197905.8 TPM= 27.38 Transcript Type= NA
chr12	2959904	3040665	2959904	3040665	+	transcript207.chr12.nic@TEAD4	transcript207.chr12.nic	protein_coding	2959904,2994738,3011004,3012170,3018545,3019115,3020634,3021844,3037968,3040107,3040365	2960040,2994992,3011068,3012232,3018588,3019170,3020773,3022017,3038108,3040259,3040665	Gene ID= ENSG00000197905.8 TPM= 6.36 Transcript Type= NA
chr12	2959414	3040673	2959414	3040673	+	ENST00000359864.6@TEAD4	ENST00000359864.6	protein_coding	2959414,2959948,2994738,3011004,3012170,3017398,3018545,3019115,3020634,3021844,3037968,3040107,3040365	2959481,2960040,2994992,3011068,3012232,3017526,3018588,3019170,3020773,3022017,3038108,3040259,3040673	Gene ID= ENSG00000197905.8 TPM= 32.05 Transcript Type= protein_coding
chr12	3040885	3046024	3040885	3046024	+	transcript216.chr12.nnic@NA	transcript216.chr12.nnic	NA	3040885	3046024	Gene ID= novel_gene_chr12_217 TPM= 9.34 Transcript Type= NA
chr12	3077355	3286564	3077355	3286564	+	ENST00000537971.5@TSPAN9	ENST00000537971.5	protein_coding	3077355,3201177,3278421,3278992,3280382,3281198,3281734,3283045	3077453,3201256,3278612,3279066,3280483,3281329,3281817,3286564	Gene ID= ENSG00000011105.12 TPM= 4.67 Transcript Type= protein_coding
chr12	3118258	3120464	3118258	3120464	-	transcript228.chr12.nnic@NA	transcript228.chr12.nnic	NA	3118258	3120464	Gene ID= novel_gene_chr12_229 TPM= 2.34 Transcript Type= NA
chr12	3226796	3229388	3226796	3229388	-	transcript226.chr12.nnic@NA	transcript226.chr12.nnic	NA	3226796	3229388	Gene ID= novel_gene_chr12_227 TPM= 4.67 Transcript Type= NA
chr12	3808861	3873458	3808861	3873458	-	transcript232.chr12.nic@PARP11	transcript232.chr12.nic	protein_coding	3873212,3863836,3829890,3828910,3826158,3822085,3821873,3814037,3808861	3873458,3863957,3830018,3829030,3826233,3822157,3822003,3814188,3812439	Gene ID= ENSG00000111224.13 TPM= 3.5 Transcript Type= NA
chr12	3808861	3873355	3808861	3873355	-	ENST00000427057.6@PARP11	ENST00000427057.6	protein_coding	3873212,3863836,3829890,3826158,3822085,3821873,3814037,3808861	3873355,3863957,3830018,3826233,3822157,3822003,3814188,3812439	Gene ID= ENSG00000111224.13 TPM= 7.01 Transcript Type= protein_coding
chr12	3808861	3873374	3808861	3873374	-	ENST00000228820.8@PARP11	ENST00000228820.8	protein_coding	3873212,3829890,3828910,3826158,3822085,3821873,3814037,3808861	3873374,3830018,3829030,3826233,3822157,3822003,3814188,3812439	Gene ID= ENSG00000111224.13 TPM= 2.34 Transcript Type= protein_coding
chr12	4273772	4305350	4273772	4305350	+	ENST00000261254.7@CCND2	ENST00000261254.7	protein_coding	4273772,4276005,4278760,4288842,4299860	4274235,4276220,4278919,4288990,4305350	Gene ID= ENSG00000118971.7 TPM= 144.78 Transcript Type= protein_coding
chr12	4321205	4354593	4321205	4354593	+	ENST00000179259.5@TIGAR	ENST00000179259.5	protein_coding	4321205,4331280,4337039,4349819,4351267,4352260	4321303,4331317,4337160,4349896,4351377,4354593	Gene ID= ENSG00000078237.6 TPM= 2.34 Transcript Type= protein_coding
chr12	4489415	4538508	4489415	4538508	-	ENST00000545746.5@C12orf4	ENST00000545746.5	protein_coding	4538409,4536017,4534157,4529869,4525484,4525254,4518774,4518058,4517061,4505306,4500138,4491177,4490522,4489415	4538508,4536211,4534302,4530050,4525583,4525375,4518880,4518255,4517189,4505380,4500340,4491234,4490589,4489899	Gene ID= ENSG00000047621.11 TPM= 3.5 Transcript Type= protein_coding
chr12	4538890	4560047	4538890	4560047	+	ENST00000228843.13@RAD51AP1	ENST00000228843.13	protein_coding	4538890,4541884,4543763,4545782,4546309,4548092,4548687,4552983,4556353,4558857	4538956,4541933,4543904,4545832,4546418,4548178,4548836,4553147,4556502,4560047	Gene ID= ENSG00000111247.14 TPM= 1.17 Transcript Type= protein_coding
chr12	4538890	4560048	4538890	4560048	+	ENST00000352618.8@RAD51AP1	ENST00000352618.8	protein_coding	4538890,4541884,4543763,4546309,4548092,4548687,4552983,4556353,4558857	4538956,4541933,4543904,4546418,4548178,4548836,4553147,4556502,4560048	Gene ID= ENSG00000111247.14 TPM= 1.17 Transcript Type= protein_coding
chr12	4567813	4613873	4567813	4613873	+	transcript264.chr12.nic@DYRK4	transcript264.chr12.nic	protein_coding	4567813,4580824,4588937,4590330,4591160,4593002,4596149,4596589,4599028,4599707,4604914,4607327,4610155,4612543,4613515	4568048,4580977,4589017,4590440,4591298,4593165,4596285,4596729,4599166,4599788,4605086,4607387,4610284,4612718,4613873	Gene ID= ENSG00000010219.13 TPM= 5.45 Transcript Type= NA
chr12	4604897	4613873	4604897	4613873	+	ENST00000545571.5@DYRK4	ENST00000545571.5	protein_coding	4604897,4610155,4612543,4613515	4605086,4610284,4612718,4613873	Gene ID= ENSG00000010219.13 TPM= 4.29 Transcript Type= retained_intron
chr12	4606588	4613873	4606588	4613873	+	transcript268.chr12.nic@DYRK4	transcript268.chr12.nic	protein_coding	4606588,4612543,4613515	4610284,4612718,4613873	Gene ID= ENSG00000010219.13 TPM= 3.12 Transcript Type= NA
chr12	4649095	4687233	4649095	4687233	+	transcript276.chr12.nic@NDUFA9	transcript276.chr12.nic	protein_coding	4649095,4654292,4654825,4659036,4662533,4668457,4669741,4682205,4685259,4686938	4649175,4654462,4657839,4659177,4662635,4668524,4669817,4682300,4685325,4687233	Gene ID= ENSG00000139180.10 TPM= 5.84 Transcript Type= NA
chr12	5043857	5046781	5043857	5046781	+	transcript281.chr12.nnic@NA	transcript281.chr12.nnic	NA	5043857	5046781	Gene ID= novel_gene_chr12_282 TPM= 2.34 Transcript Type= NA
chr12	5948874	6124675	5948874	6124675	-	ENST00000261405.9@VWF	ENST00000261405.9	protein_coding	6124421,6123142,6121174,6110866,6110374,6095460,6075335,6073619,6072331,6071297,6065137,6064246,6062954,6057849,6056857,6052543,6046723,6044291,6036388,6034688,6031444,6029342,6025906,6025580,6023631,6022740,6021900,6018365,6016754,6016516,6016089,6013481,6012087,6011617,5996002,5994415,5993862,5991819,5985563,5985045,5983150,5981786,5976111,5971599,5969211,5968127,5967486,5953496,5952391,5951844,5949786,5948874	6124675,6123196,6121338,6110968,6110582,6095584,6075551,6073741,6072442,6071343,6065273,6064384,6063054,6058044,6057072,6052783,6046817,6044451,6036491,6034826,6031578,6029488,6026046,6025693,6023787,6022898,6022035,6019743,6016870,6016656,6016232,6013645,6012130,6011794,5996222,5994607,5994203,5992018,5985665,5985119,5983254,5981991,5976260,5971709,5969391,5968167,5967602,5953594,5952519,5951883,5949883,5949203	Gene ID= ENSG00000110799.13 TPM= 1119.72 Transcript Type= protein_coding
chr12	6068819	6071100	6068819	6071100	-	transcript303.chr12.nnic@NA	transcript303.chr12.nnic	NA	6068819	6071100	Gene ID= novel_gene_chr12_304 TPM= 4.67 Transcript Type= NA
chr12	6199715	6238261	6199715	6238261	+	ENST00000382518.5@CD9	ENST00000382518.5	protein_coding	6199715,6200422,6225426,6232632,6233412,6235229,6235476,6236192,6237763	6200072,6200565,6225534,6232729,6233486,6235327,6235565,6236275,6238261	Gene ID= ENSG00000010278.12 TPM= 130.39 Transcript Type= protein_coding
chr12	6200316	6238271	6200316	6238271	+	ENST00000610354.4@CD9	ENST00000610354.4	protein_coding	6200316,6225426,6232632,6233412,6235229,6235475,6236192,6237763	6200565,6225534,6232729,6233486,6235327,6235565,6236275,6238271	Gene ID= ENSG00000010278.12 TPM= 631.28 Transcript Type= protein_coding
chr12	6200449	6238259	6200449	6238259	+	ENST00000009180.8@CD9	ENST00000009180.8	protein_coding	6200449,6225426,6232632,6233412,6235229,6235476,6236192,6237763	6200565,6225534,6232729,6233486,6235327,6235565,6236275,6238259	Gene ID= ENSG00000010278.12 TPM= 10.12 Transcript Type= protein_coding
chr12	6321411	6321840	6321411	6321840	+	transcript375.chr12.nnic@NA	transcript375.chr12.nnic	NA	6321411	6321840	Gene ID= novel_gene_chr12_376 TPM= 2.34 Transcript Type= NA
chr12	6328757	6342027	6328757	6342027	-	transcript340.chr12.nnic@TNFRSF1A	transcript340.chr12.nnic	protein_coding	6341776,6334091,6333737,6333367,6333069,6331876,6330853,6330598,6330267,6329778,6328757	6342027,6334244,6333865,6333516,6333147,6331993,6330926,6330711,6330295,6330066,6329622	Gene ID= ENSG00000067182.7 TPM= 13.7 Transcript Type= NA
chr12	6328757	6342114	6328757	6342114	-	ENST00000162749.6@TNFRSF1A	ENST00000162749.6	protein_coding	6341776,6334091,6333737,6333367,6333069,6330853,6330598,6330267,6329778,6328757	6342114,6334244,6333865,6333516,6333147,6330926,6330711,6330295,6330066,6329622	Gene ID= ENSG00000067182.7 TPM= 199.34 Transcript Type= protein_coding
chr12	6328757	6342027	6328757	6342027	-	transcript358.chr12.nic@TNFRSF1A	transcript358.chr12.nic	protein_coding	6341776,6334091,6333737,6333367,6333069,6330598,6330267,6329778,6328757	6342027,6334244,6333865,6333516,6333147,6330711,6330295,6330066,6329622	Gene ID= ENSG00000067182.7 TPM= 17.98 Transcript Type= NA
chr12	6338806	6342017	6338806	6342017	-	transcript379.chr12.nnic@NA	transcript379.chr12.nnic	NA	6338806	6342017	Gene ID= novel_gene_chr12_380 TPM= 2.34 Transcript Type= NA
chr12	6345122	6348089	6345122	6348089	-	transcript381.chr12.nnic@NA	transcript381.chr12.nnic	NA	6345122	6348089	Gene ID= novel_gene_chr12_382 TPM= 4.67 Transcript Type= NA
chr12	6346847	6375451	6346847	6375451	-	transcript336.chr12.nnic@SCNN1A	transcript336.chr12.nnic	protein_coding	6374374,6363443,6362051,6355777,6355272,6354750,6354438,6349327,6349164,6348950,6348727,6346847	6375451,6363716,6362241,6355880,6355435,6354848,6354555,6349405,6349221,6349005,6348802,6348253	Gene ID= ENSG00000111319.12 TPM= 72.1 Transcript Type= NA
chr12	6346847	6358879	6346847	6358879	-	transcript359.chr12.nic@SCNN1A	transcript359.chr12.nic	protein_coding	6355777,6355272,6354750,6354438,6349327,6349164,6348950,6348727,6346847	6358879,6355435,6354848,6354555,6349405,6349221,6349005,6348802,6348253	Gene ID= ENSG00000111319.12 TPM= 20.43 Transcript Type= NA
chr12	6346843	6375224	6346843	6375224	-	ENST00000360168.7@SCNN1A	ENST00000360168.7	protein_coding	6374368,6363443,6362051,6355777,6355272,6354750,6354438,6349327,6349164,6348950,6348727,6346843	6375224,6363710,6362241,6355880,6355435,6354848,6354555,6349405,6349221,6349005,6348802,6348253	Gene ID= ENSG00000111319.12 TPM= 35.52 Transcript Type= protein_coding
chr12	6346847	6375549	6346847	6375549	-	ENST00000228916.6@SCNN1A	ENST00000228916.6	protein_coding	6375505,6374368,6363443,6362051,6355777,6355272,6354750,6354438,6349327,6349164,6348950,6348727,6346847	6375549,6374837,6363710,6362241,6355880,6355435,6354848,6354555,6349405,6349221,6349005,6348802,6348253	Gene ID= ENSG00000111319.12 TPM= 33.18 Transcript Type= protein_coding
chr12	6358247	6359851	6358247	6359851	+	transcript377.chr12.nnic@NA	transcript377.chr12.nnic	NA	6358247	6359851	Gene ID= novel_gene_chr12_378 TPM= 3.5 Transcript Type= NA
chr12	6384177	6391563	6384177	6391563	+	transcript355.chr12.nic@LTBR	transcript355.chr12.nic	protein_coding	6384177,6384588,6385022,6385227,6386066,6386347,6388800,6390112,6390660	6384454,6384684,6385147,6385379,6386162,6386444,6388825,6390340,6391563	Gene ID= ENSG00000111321.10 TPM= 38.53 Transcript Type= NA
chr12	6384033	6391563	6384033	6391563	+	ENST00000228918.8@LTBR	ENST00000228918.8	protein_coding	6384033,6384588,6385022,6385227,6386066,6386347,6388398,6388800,6390112,6390660	6384454,6384684,6385147,6385379,6386162,6386444,6388505,6388825,6390340,6391563	Gene ID= ENSG00000111321.10 TPM= 274.38 Transcript Type= protein_coding
chr12	6439165	6451523	6439165	6451523	-	transcript389.chr12.nnic@CD27-AS1	transcript389.chr12.nnic	processed_transcript	6451469,6450893,6448640,6448037,6446961,6443546,6439165	6451523,6450980,6448737,6448150,6447087,6443717,6439676	Gene ID= ENSG00000215039.6 TPM= 3.5 Transcript Type= NA
chr12	6439168	6451546	6439168	6451546	-	transcript395.chr12.nnic@CD27-AS1	transcript395.chr12.nnic	processed_transcript	6450341,6448640,6446961,6439168	6451546,6448737,6448150,6439676	Gene ID= ENSG00000215039.6 TPM= 2.34 Transcript Type= NA
chr12	6447616	6451523	6447616	6451523	-	transcript398.chr12.nnic@CD27-AS1	transcript398.chr12.nnic	processed_transcript	6451469,6448640,6447616	6451523,6448737,6448150	Gene ID= ENSG00000215039.6 TPM= 2.34 Transcript Type= NA
chr12	6439161	6451567	6439161	6451567	-	ENST00000545339.5@CD27-AS1	ENST00000545339.5	processed_transcript	6451469,6450341,6448640,6448037,6446961,6443546,6439161	6451567,6450980,6448737,6448150,6447087,6443717,6439676	Gene ID= ENSG00000215039.6 TPM= 3.5 Transcript Type= antisense_RNA
chr12	6447616	6451515	6447616	6451515	-	ENST00000504270.2@CD27-AS1	ENST00000504270.2	processed_transcript	6451469,6448640,6447616	6451515,6448757,6448150	Gene ID= ENSG00000215039.6 TPM= 3.5 Transcript Type= retained_intron
chr12	6452092	6462298	6452092	6462298	+	transcript401.chr12.nnic@TAPBPL	transcript401.chr12.nnic	protein_coding	6452092,6453067,6453447,6457406,6458645,6460855,6461159,6462034	6452312,6453297,6453716,6457744,6458947,6460938,6461390,6462298	Gene ID= ENSG00000139192.11 TPM= 2.34 Transcript Type= NA
chr12	6452092	6462300	6452092	6462300	+	transcript406.chr12.nic@TAPBPL	transcript406.chr12.nic	protein_coding	6452092,6453067,6453447,6457406,6458645,6460855	6452312,6453297,6453716,6457744,6458947,6462300	Gene ID= ENSG00000139192.11 TPM= 3.5 Transcript Type= NA
chr12	6452084	6462318	6452084	6462318	+	ENST00000266556.7@TAPBPL	ENST00000266556.7	protein_coding	6452084,6453067,6453447,6457406,6458645,6460855,6462034	6452312,6453297,6453716,6457744,6458947,6460938,6462318	Gene ID= ENSG00000139192.11 TPM= 49.04 Transcript Type= protein_coding
chr12	6491886	6493598	6491886	6493598	-	ENST00000229238.4@MRPL51	ENST00000229238.4	protein_coding	6493058,6492862,6491886	6493598,6492972,6492467	Gene ID= ENSG00000111639.7 TPM= 35.03 Transcript Type= protein_coding
chr12	6492147	6493840	6492147	6493840	-	ENST00000543164.5@MRPL51	ENST00000543164.5	protein_coding	6493459,6492862,6492147	6493840,6492972,6492467	Gene ID= ENSG00000111639.7 TPM= 2.34 Transcript Type= protein_coding
chr12	6493379	6531955	6493379	6531955	+	ENST00000315579.9@NCAPD2	ENST00000315579.9	protein_coding	6493379,6495076,6509717,6510075,6510629,6511110,6514265,6514464,6514773,6516828,6517365,6517596,6517779,6520986,6521798,6522828,6523262,6525583,6526068,6526287,6526448,6526891,6527777,6527968,6528173,6528679,6528945,6529513,6529775,6530691,6530921,6531327	6494154,6495225,6509792,6510133,6510810,6511252,6514392,6514587,6514920,6517025,6517499,6517683,6517959,6521110,6522037,6523002,6523346,6525716,6526200,6526371,6526615,6527063,6527888,6528091,6528328,6528856,6529039,6529593,6529958,6530817,6531076,6531955	Gene ID= ENSG00000010292.12 TPM= 50.21 Transcript Type= protein_coding
chr12	6533927	6538371	6533927	6538371	+	ENST00000229239.9@GAPDH	ENST00000229239.9	protein_coding	6533927,6534810,6536494,6536684,6536920,6537101,6537309,6537584,6538101	6534569,6534861,6536593,6536790,6537010,6537216,6537390,6537996,6538371	Gene ID= ENSG00000111640.14 TPM= 1287.66 Transcript Type= protein_coding
chr12	6534754	6538339	6534754	6538339	+	ENST00000396859.5@GAPDH	ENST00000396859.5	protein_coding	6534754,6536494,6536684,6536920,6537101,6537309,6537584,6538101	6534861,6536593,6536790,6537010,6537216,6537390,6537996,6538339	Gene ID= ENSG00000111640.14 TPM= 29.19 Transcript Type= protein_coding
chr12	6539540	6556044	6539540	6556044	-	transcript430.chr12.nnic@IFFO1	transcript430.chr12.nnic	protein_coding	6555995,6555257,6550941,6550695,6549756,6548668,6548425,6548065,6541512,6539540	6556044,6555885,6551001,6550790,6549896,6548825,6548545,6548160,6541642,6540588	Gene ID= ENSG00000010295.19 TPM= 6.63 Transcript Type= NA
chr12	6539540	6556083	6539540	6556083	-	transcript431.chr12.nic@IFFO1	transcript431.chr12.nic	protein_coding	6555257,6551398,6550941,6550695,6549756,6548668,6548425,6548065,6541512,6539540	6556083,6551503,6551001,6550790,6549896,6549484,6548545,6548160,6541642,6540588	Gene ID= ENSG00000010295.19 TPM= 6.63 Transcript Type= NA
chr12	6539540	6556097	6539540	6556097	-	transcript432.chr12.nnic@IFFO1	transcript432.chr12.nnic	protein_coding	6555995,6555257,6551398,6550941,6550695,6549756,6548668,6548065,6541512,6539540	6556097,6555885,6551503,6551001,6550790,6549896,6548825,6548545,6541642,6540588	Gene ID= ENSG00000010295.19 TPM= 5.07 Transcript Type= NA
chr12	6539540	6556083	6539540	6556083	-	transcript445.chr12.nic@IFFO1	transcript445.chr12.nic	protein_coding	6555257,6550941,6550695,6549756,6548668,6548065,6541512,6539540	6556083,6551001,6550790,6549896,6548825,6548545,6541642,6540588	Gene ID= ENSG00000010295.19 TPM= 4.3 Transcript Type= NA
chr12	6539540	6556083	6539540	6556083	-	transcript446.chr12.nic@IFFO1	transcript446.chr12.nic	protein_coding	6555257,6550941,6550695,6549756,6548668,6548065,6541512,6539540	6556083,6551001,6550790,6549896,6549484,6548545,6541642,6540588	Gene ID= ENSG00000010295.19 TPM= 3.13 Transcript Type= NA
chr12	6539528	6556071	6539528	6556071	-	ENST00000396840.6@IFFO1	ENST00000396840.6	protein_coding	6555257,6550941,6550695,6549756,6548668,6548425,6548065,6541512,6539528	6556071,6551001,6550790,6549896,6548825,6548545,6548157,6541642,6540588	Gene ID= ENSG00000010295.19 TPM= 13.4 Transcript Type= protein_coding
chr12	6539577	6556071	6539577	6556071	-	ENST00000488007.5@IFFO1	ENST00000488007.5	protein_coding	6555257,6551398,6550941,6550695,6549756,6548668,6548065,6541512,6539577	6556071,6551503,6551001,6550790,6549896,6548825,6548545,6541642,6540588	Gene ID= ENSG00000010295.19 TPM= 5.84 Transcript Type= retained_intron
chr12	6539528	6556071	6539528	6556071	-	ENST00000487279.6@IFFO1	ENST00000487279.6	protein_coding	6555257,6551398,6550941,6550695,6549756,6548668,6548425,6548065,6541512,6539528	6556071,6551503,6551001,6550790,6549896,6548825,6548545,6548160,6541642,6540588	Gene ID= ENSG00000010295.19 TPM= 2.9 Transcript Type= nonsense_mediated_decay
chr12	6556870	6568332	6556870	6568332	-	ENST00000620535.4@NOP2	ENST00000620535.4	protein_coding	6568207,6567816,6566777,6566529,6566101,6564150,6563891,6563612,6563315,6563081,6561884,6561664,6560931,6560698,6560447,6560098,6556870	6568332,6567922,6566822,6566617,6566336,6564248,6563946,6563771,6563512,6563170,6561971,6561804,6561070,6560787,6560569,6560326,6557642	Gene ID= ENSG00000111641.11 TPM= 2.27 Transcript Type= protein_coding
chr12	6556871	6568691	6556871	6568691	-	ENST00000541778.5@NOP2	ENST00000541778.5	protein_coding	6568207,6567816,6566777,6566529,6566101,6563891,6563614,6563315,6563081,6561884,6561664,6560931,6560698,6560447,6560098,6556871	6568691,6567922,6566822,6566617,6566324,6563946,6563771,6563514,6563170,6561971,6561804,6561070,6560787,6560569,6560326,6557642	Gene ID= ENSG00000111641.11 TPM= 9.56 Transcript Type= protein_coding
chr12	6556871	6568291	6556871	6568291	-	transcript418.chr12.nic@NOP2	transcript418.chr12.nic	protein_coding	6568139,6567816,6566777,6566529,6566101,6563891,6563614,6563315,6563081,6561884,6561664,6560931,6560698,6560447,6560098,6556871	6568291,6567922,6566822,6566617,6566336,6563946,6563771,6563514,6563170,6561971,6561804,6561070,6560787,6560569,6560326,6557642	Gene ID= ENSG00000111641.11 TPM= 6.64 Transcript Type= NA
chr12	6556871	6568335	6556871	6568335	-	transcript424.chr12.nic@NOP2	transcript424.chr12.nic	protein_coding	6568207,6567816,6566777,6566529,6566101,6563891,6563614,6563315,6563081,6561884,6561664,6560931,6560698,6560098,6556871	6568335,6567922,6566822,6566617,6566336,6563946,6563771,6563514,6563170,6561971,6561804,6561070,6560787,6560569,6557642	Gene ID= ENSG00000111641.11 TPM= 7.17 Transcript Type= NA
chr12	6556871	6568335	6556871	6568335	-	transcript425.chr12.nic@NOP2	transcript425.chr12.nic	protein_coding	6568207,6567816,6566777,6566101,6563891,6563614,6563315,6563081,6561884,6561664,6560931,6560698,6560098,6556871	6568335,6567922,6566822,6566617,6563946,6563771,6563514,6563170,6561971,6561804,6561070,6560787,6560569,6557642	Gene ID= ENSG00000111641.11 TPM= 7.17 Transcript Type= NA
chr12	6556871	6568324	6556871	6568324	-	ENST00000322166.9@NOP2	ENST00000322166.9	protein_coding	6568207,6567816,6566777,6566529,6566101,6563891,6563614,6563315,6563081,6561884,6561664,6560931,6560698,6560447,6560098,6556871	6568324,6567922,6566822,6566617,6566336,6563946,6563771,6563514,6563170,6561971,6561804,6561070,6560787,6560569,6560326,6557642	Gene ID= ENSG00000111641.11 TPM= 13.65 Transcript Type= protein_coding
chr12	6556871	6568286	6556871	6568286	-	ENST00000399466.6@NOP2	ENST00000399466.6	protein_coding	6568139,6567816,6566777,6566529,6566101,6563891,6563614,6563315,6563081,6561884,6561664,6560931,6560698,6560447,6560098,6556871	6568286,6567922,6566822,6566617,6566324,6563946,6563771,6563514,6563170,6561971,6561804,6561070,6560787,6560569,6560326,6557642	Gene ID= ENSG00000111641.11 TPM= 6.06 Transcript Type= protein_coding
chr12	6570083	6614455	6570083	6614455	-	transcript455.chr12.nnic@CHD4	transcript455.chr12.nnic	protein_coding	6614335,6607300,6606274,6602376,6601960,6601648,6601289,6600926,6600534,6600217,6599773,6598222,6597894,6596006,6595334,6594459,6593416,6593091,6592696,6592393,6591916,6591694,6591466,6588298,6587712,6587384,6583198,6583027,6582848,6582615,6582137,6581649,6581291,6581044,6578846,6578409,6578029,6577785,6573074,6570869,6570083	6614455,6607417,6606451,6602497,6602175,6601766,6601530,6601053,6600669,6600395,6600012,6598425,6598099,6596137,6595430,6594650,6593616,6593228,6592817,6592566,6592057,6591825,6591583,6588422,6587949,6587559,6583378,6583113,6582936,6582748,6582281,6581814,6581388,6581173,6578917,6578546,6578137,6577917,6573269,6571032,6570693	Gene ID= ENSG00000111642.14 TPM= 16.35 Transcript Type= NA
chr12	6570083	6607424	6570083	6607424	-	ENST00000544040.5@CHD4	ENST00000544040.5	protein_coding	6607300,6606274,6602376,6601960,6601648,6601289,6600926,6600534,6600217,6599773,6598222,6597894,6596006,6595334,6594459,6593416,6593091,6592696,6592393,6591916,6591694,6591466,6588298,6587712,6587384,6583198,6583027,6582848,6582615,6582137,6581649,6581291,6581044,6578846,6578409,6578029,6577785,6573074,6570869,6570083	6607424,6606451,6602497,6602154,6601766,6601530,6601053,6600669,6600395,6600012,6598425,6598099,6596137,6595430,6594650,6593616,6593228,6592817,6592566,6592057,6591825,6591583,6588422,6587949,6587559,6583378,6583113,6582936,6582748,6582281,6581814,6581388,6581173,6578917,6578546,6578137,6577917,6573269,6571032,6570693	Gene ID= ENSG00000111642.14 TPM= 18.68 Transcript Type= protein_coding
chr12	6618835	6636447	6618835	6636447	-	ENST00000329858.8@LPAR5	ENST00000329858.8	protein_coding	6635907,6618835	6636447,6621464	Gene ID= ENSG00000184574.9 TPM= 3.5 Transcript Type= protein_coding
chr12	6638075	6647460	6638075	6647460	-	ENST00000229243.6@ACRBP	ENST00000229243.6	protein_coding	6647324,6646794,6646483,6645220,6644137,6643539,6640343,6640060,6638954,6638075	6647460,6647012,6646577,6645337,6644605,6643671,6640522,6640227,6639037,6638404	Gene ID= ENSG00000111644.7 TPM= 1.17 Transcript Type= protein_coding
chr12	6650591	6663136	6650591	6663136	-	transcript473.chr12.nic@ING4	transcript473.chr12.nic	protein_coding	6663065,6656727,6655638,6653230,6652936,6652662,6652271,6651324,6650591	6663136,6656798,6655913,6653396,6653050,6652770,6652418,6651385,6651234	Gene ID= ENSG00000111653.19 TPM= 2.92 Transcript Type= NA
chr12	6650280	6663148	6650280	6663148	-	ENST00000341550.8@ING4	ENST00000341550.8	protein_coding	6663065,6656727,6653230,6652936,6652662,6652271,6651324,6650280	6663148,6656798,6653396,6653050,6652767,6652418,6651385,6651234	Gene ID= ENSG00000111653.19 TPM= 24.52 Transcript Type= protein_coding
chr12	6650591	6663140	6650591	6663140	-	ENST00000396807.8@ING4	ENST00000396807.8	protein_coding	6663065,6656727,6653230,6652936,6652662,6652271,6651324,6650591	6663140,6656798,6653396,6653050,6652770,6652418,6651385,6651234	Gene ID= ENSG00000111653.19 TPM= 20.43 Transcript Type= protein_coding
chr12	6650539	6663142	6650539	6663142	-	ENST00000619641.4@ING4	ENST00000619641.4	protein_coding	6663065,6656727,6652936,6652662,6652271,6651324,6650539	6663142,6656798,6653050,6652770,6652418,6651385,6651234	Gene ID= ENSG00000111653.19 TPM= 1.17 Transcript Type= protein_coding
chr12	6650626	6663142	6650626	6663142	-	ENST00000446105.6@ING4	ENST00000446105.6	protein_coding	6663065,6656727,6653230,6652945,6652662,6652271,6651324,6650626	6663142,6656798,6653396,6653050,6652767,6652418,6651385,6651234	Gene ID= ENSG00000111653.19 TPM= 11.68 Transcript Type= protein_coding
chr12	6666648	6689510	6666648	6689510	-	ENST00000396801.7@ZNF384	ENST00000396801.7	protein_coding	6689368,6688167,6679455,6678946,6678663,6678127,6673216,6672350,6670760,6669031,6666648	6689510,6688226,6679525,6679183,6678710,6678460,6673440,6672532,6670838,6669189,6668115	Gene ID= ENSG00000126746.17 TPM= 3.5 Transcript Type= protein_coding
chr12	6666477	6689510	6666477	6689510	-	ENST00000319770.7@ZNF384	ENST00000319770.7	protein_coding	6689098,6688167,6679455,6678946,6678663,6678127,6673216,6670760,6669031,6666477	6689510,6688226,6679525,6679183,6678710,6678460,6673440,6670838,6669189,6668115	Gene ID= ENSG00000126746.17 TPM= 9.92 Transcript Type= protein_coding
chr12	6666738	6689478	6666738	6689478	-	transcript498.chr12.nic@ZNF384	transcript498.chr12.nic	protein_coding	6689368,6688167,6679455,6678946,6678663,6678127,6673216,6670760,6669031,6666738	6689478,6688226,6679525,6679183,6678710,6678460,6673440,6670838,6669189,6668115	Gene ID= ENSG00000126746.17 TPM= 2.34 Transcript Type= NA
chr12	6666477	6688945	6666477	6688945	-	transcript500.chr12.nic@ZNF384	transcript500.chr12.nic	protein_coding	6688167,6679455,6678946,6678663,6678127,6673216,6670760,6669031,6666477	6688945,6679525,6679183,6678710,6678460,6673440,6670838,6669189,6668115	Gene ID= ENSG00000126746.17 TPM= 4.09 Transcript Type= NA
chr12	6723741	6731856	6723741	6731856	+	ENST00000543155.5@COPS7A	ENST00000543155.5	protein_coding	6723741,6724614,6727926,6728223,6729247,6730402,6730669,6731000	6724179,6724818,6728001,6728311,6729449,6730507,6730820,6731856	Gene ID= ENSG00000111652.9 TPM= 81.26 Transcript Type= protein_coding
chr12	6724015	6731857	6724015	6731857	+	transcript516.chr12.nic@COPS7A	transcript516.chr12.nic	protein_coding	6724015,6724614,6727926,6728223,6729247,6730402,6730669	6724179,6724818,6728001,6728311,6729449,6730507,6731857	Gene ID= ENSG00000111652.9 TPM= 13.31 Transcript Type= NA
chr12	6724014	6731873	6724014	6731873	+	ENST00000626119.2@COPS7A	ENST00000626119.2	protein_coding	6724014,6724614,6728223,6729247,6730402,6730669,6731000	6724152,6724818,6728311,6729449,6730507,6730820,6731873	Gene ID= ENSG00000111652.9 TPM= 7.71 Transcript Type= protein_coding
chr12	6724100	6731857	6724100	6731857	+	transcript520.chr12.nic@COPS7A	transcript520.chr12.nic	protein_coding	6724100,6724614,6727926,6728223,6729247,6730402,6730669	6724250,6724818,6728001,6728311,6729449,6730507,6731857	Gene ID= ENSG00000111652.9 TPM= 6.31 Transcript Type= NA
chr12	6724071	6731807	6724071	6731807	+	ENST00000229251.7@COPS7A	ENST00000229251.7	protein_coding	6724071,6724614,6727926,6728223,6729247,6730402,6730669,6731000	6724152,6724818,6728001,6728311,6729449,6730507,6730820,6731807	Gene ID= ENSG00000111652.9 TPM= 4.9 Transcript Type= protein_coding
chr12	6724079	6731828	6724079	6731828	+	ENST00000539735.5@COPS7A	ENST00000539735.5	protein_coding	6724079,6724614,6727926,6728223,6729247,6730402,6730669,6731000	6724250,6724818,6728001,6728311,6729449,6730507,6730820,6731828	Gene ID= ENSG00000111652.9 TPM= 20.08 Transcript Type= protein_coding
chr12	6724287	6731875	6724287	6731875	+	ENST00000534947.5@COPS7A	ENST00000534947.5	protein_coding	6724287,6727926,6728223,6729247,6730402,6730669,6731000	6724818,6728001,6728311,6729449,6730507,6730820,6731875	Gene ID= ENSG00000111652.9 TPM= 14.71 Transcript Type= protein_coding
chr12	6747996	6753555	6747996	6753555	-	ENST00000203630.9@MLF2	ENST00000203630.9	protein_coding	6752939,6752285,6751925,6751641,6750713,6750177,6749848,6748770,6747996	6753555,6752362,6752054,6751676,6750766,6750305,6750007,6748982,6748547	Gene ID= ENSG00000089693.10 TPM= 352.12 Transcript Type= protein_coding
chr12	6747998	6753472	6747998	6753472	-	transcript535.chr12.nic@MLF2	transcript535.chr12.nic	protein_coding	6752939,6752285,6751925,6751641,6750713,6750177,6749848,6747998	6753472,6752362,6752054,6751676,6750766,6750305,6750007,6748982	Gene ID= ENSG00000089693.10 TPM= 10.6 Transcript Type= NA
chr12	6767023	6770952	6767023	6770952	+	transcript559.chr12.nnic@PTMS	transcript559.chr12.nnic	protein_coding	6767023,6769603,6769921,6770157,6770392	6767777,6769674,6769999,6770218,6770952	Gene ID= ENSG00000159335.15 TPM= 101 Transcript Type= NA
chr12	6768360	6770943	6768360	6770943	+	transcript566.chr12.nnic@NA	transcript566.chr12.nnic	NA	6768360	6770943	Gene ID= novel_gene_chr12_567 TPM= 3.5 Transcript Type= NA
chr12	6772520	6778453	6772520	6778453	+	ENST00000203629.2@LAG3	ENST00000203629.2	protein_coding	6772520,6773192,6773697,6774595,6775273,6777264,6777791,6778244	6772910,6773339,6774001,6774864,6775548,6777506,6777921,6778453	Gene ID= ENSG00000089692.8 TPM= 2.34 Transcript Type= protein_coding
chr12	6789498	6820808	6789498	6820808	+	transcript575.chr12.nic@CD4	transcript575.chr12.nic	protein_coding	6789498,6814142,6814759,6816056,6817130,6818421,6818847,6819299	6789662,6814300,6814992,6816403,6817330,6818542,6818914,6820808	Gene ID= ENSG00000010610.9 TPM= 3.5 Transcript Type= NA
chr12	6789472	6820808	6789472	6820808	+	ENST00000011653.8@CD4	ENST00000011653.8	protein_coding	6789472,6800072,6800307,6814142,6814759,6816056,6817130,6818421,6818847,6819299	6789662,6800187,6800471,6814300,6814992,6816403,6817330,6818542,6818914,6820808	Gene ID= ENSG00000010610.9 TPM= 166.97 Transcript Type= protein_coding
chr12	6821545	6827418	6821545	6827418	+	ENST00000311268.7@GPR162	ENST00000311268.7	protein_coding	6821545,6823468,6825484,6826196,6826653	6821900,6824765,6825673,6826353,6827418	Gene ID= ENSG00000250510.7 TPM= 10.51 Transcript Type= protein_coding
chr12	6821704	6827421	6821704	6827421	+	ENST00000428545.6@GPR162	ENST00000428545.6	protein_coding	6821704,6823468,6825484,6826196,6826653	6821900,6823763,6825673,6826353,6827421	Gene ID= ENSG00000250510.7 TPM= 4.67 Transcript Type= protein_coding
chr12	6828410	6839851	6828410	6839851	+	ENST00000290510.9@P3H3	ENST00000290510.9	protein_coding	6828410,6829859,6830353,6830639,6831216,6831825,6833592,6833742,6833925,6836985,6837423,6837732,6837958,6839000,6839297	6828938,6830011,6830554,6830770,6831352,6831914,6833644,6833809,6834049,6837086,6837573,6837849,6838033,6839140,6839851	Gene ID= ENSG00000110811.19 TPM= 21.02 Transcript Type= protein_coding
chr12	6829828	6839846	6829828	6839846	+	ENST00000612048.4@P3H3	ENST00000612048.4	protein_coding	6829828,6830353,6830639,6831216,6831825,6833592,6833742,6833925,6836985,6837423,6837732,6837958,6839000,6839297	6830011,6830554,6830770,6831352,6831914,6833644,6833809,6834049,6837086,6837573,6837849,6838033,6839140,6839846	Gene ID= ENSG00000110811.19 TPM= 2.34 Transcript Type= retained_intron
chr12	6840211	6847393	6840211	6847393	+	ENST00000229264.7@GNB3	ENST00000229264.7	protein_coding	6840211,6840869,6841258,6841586,6842970,6843174,6843363,6843632,6843777,6845586,6846792	6840420,6841033,6841344,6841624,6843076,6843237,6843525,6843698,6843978,6845802,6847393	Gene ID= ENSG00000111664.10 TPM= 1.17 Transcript Type= protein_coding
chr12	6852134	6866632	6852134	6866632	+	transcript597.chr12.nic@USP5	transcript597.chr12.nic	protein_coding	6852134,6855401,6855755,6856017,6856305,6856707,6857629,6858424,6859470,6860151,6860366,6860953,6861443,6862470,6863186,6863830,6864722,6865164,6865984	6852290,6855526,6855821,6856150,6856450,6856891,6857723,6858617,6859541,6860238,6860491,6861106,6861617,6862558,6863308,6864195,6864875,6865248,6866632	Gene ID= ENSG00000111667.13 TPM= 8.47 Transcript Type= NA
chr12	6852148	6866620	6852148	6866620	+	ENST00000389231.9@USP5	ENST00000389231.9	protein_coding	6852148,6855401,6855755,6856017,6856305,6856707,6857629,6858424,6859470,6860151,6860366,6860953,6861443,6862470,6863186,6863830,6864050,6864722,6865164,6865984	6852290,6855526,6855821,6856150,6856450,6856891,6857723,6858617,6859541,6860238,6860491,6861106,6861617,6862558,6863308,6863973,6864195,6864875,6865248,6866620	Gene ID= ENSG00000111667.13 TPM= 156.46 Transcript Type= protein_coding
chr12	6852128	6866629	6852128	6866629	+	ENST00000229268.12@USP5	ENST00000229268.12	protein_coding	6852128,6855401,6855755,6856017,6856305,6856707,6857629,6858424,6859470,6860151,6860366,6860953,6861443,6862470,6863186,6863830,6864050,6864722,6865164,6865984	6852290,6855526,6855821,6856150,6856450,6856891,6857723,6858617,6859541,6860238,6860491,6861106,6861617,6862558,6863377,6863973,6864195,6864875,6865248,6866629	Gene ID= ENSG00000111667.13 TPM= 9.63 Transcript Type= protein_coding
chr12	6867531	6870828	6867531	6870828	+	ENST00000396705.9@TPI1	ENST00000396705.9	protein_coding	6867531,6868864,6869099,6869258,6869688,6870049,6870265	6867681,6868987,6869183,6869390,6869773,6870136,6870828	Gene ID= ENSG00000111669.14 TPM= 691.6 Transcript Type= protein_coding
chr12	6870935	6873365	6870935	6873365	-	transcript629.chr12.nic@SPSB2	transcript629.chr12.nic	protein_coding	6872238,6870935	6873365,6871319	Gene ID= ENSG00000111671.9 TPM= 30.94 Transcript Type= NA
chr12	6870935	6873336	6870935	6873336	-	ENST00000524270.5@SPSB2	ENST00000524270.5	protein_coding	6873246,6872238,6870935	6873336,6872997,6871319	Gene ID= ENSG00000111671.9 TPM= 33.28 Transcript Type= protein_coding
chr12	6870936	6873343	6870936	6873343	-	transcript631.chr12.nnic@NA	transcript631.chr12.nnic	NA	6870936	6873343	Gene ID= novel_gene_chr12_632 TPM= 12.84 Transcript Type= NA
chr12	6873389	6884616	6873389	6884616	+	ENST00000412023.5@RPL13P5	ENST00000412023.5	transcribed_processed_pseudogene	6873389,6882196,6883704	6873781,6882327,6884616	Gene ID= ENSG00000240370.6 TPM= 1.17 Transcript Type= processed_transcript
chr12	6884682	6885786	6884682	6885786	+	ENST00000602547.1@DSTNP2	ENST00000602547.1	transcribed_unprocessed_pseudogene	6884682	6885786	Gene ID= ENSG00000248593.3 TPM= 2.34 Transcript Type= processed_transcript
chr12	6904733	6914229	6904733	6914229	+	ENST00000007969.12@LRRC23	ENST00000007969.12	protein_coding	6904733,6905585,6905845,6906409,6907315,6909890,6912730,6913891	6904903,6905759,6905954,6906662,6907445,6910026,6913027,6914229	Gene ID= ENSG00000010626.14 TPM= 1.17 Transcript Type= protein_coding
chr12	6904806	6908620	6904806	6908620	+	transcript639.chr12.nic@LRRC23	transcript639.chr12.nic	protein_coding	6904806,6905585,6906409,6907315	6904903,6905759,6906662,6908620	Gene ID= ENSG00000010626.14 TPM= 3.5 Transcript Type= NA
chr12	6904834	6914229	6904834	6914229	+	ENST00000428946.5@LRRC23	ENST00000428946.5	protein_coding	6904834,6905585,6906409,6907315,6913891	6904903,6905759,6906662,6907445,6914229	Gene ID= ENSG00000010626.14 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr12	6904791	6914194	6904791	6914194	+	ENST00000451681.5@LRRC23	ENST00000451681.5	protein_coding	6904791,6905585,6906409,6907315,6909890,6912730,6913891	6904903,6905759,6906662,6907445,6910026,6913027,6914194	Gene ID= ENSG00000010626.14 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr12	6914450	6923696	6914450	6923696	+	ENST00000229277.5@ENO2	ENST00000229277.5	protein_coding	6914450,6915821,6916417,6916671,6917038,6917581,6917940,6919566,6921581,6922056,6922344,6922731	6914659,6915917,6916512,6916729,6917107,6917714,6918162,6919763,6921782,6922164,6922402,6923696	Gene ID= ENSG00000111674.8 TPM= 57.99 Transcript Type= protein_coding
chr12	6914522	6923696	6914522	6923696	+	transcript644.chr12.nic@ENO2	transcript644.chr12.nic	protein_coding	6914522,6915821,6916417,6916671,6917581,6917940,6919566,6921581,6922056,6922344,6922731	6914659,6915917,6916512,6917107,6917714,6918162,6919763,6921782,6922164,6922402,6923696	Gene ID= ENSG00000111674.8 TPM= 5.45 Transcript Type= NA
chr12	6914710	6923696	6914710	6923696	+	transcript646.chr12.nic@ENO2	transcript646.chr12.nic	protein_coding	6914710,6916417,6916671,6917581,6917940,6919566,6921581,6922056,6922344,6922731	6915917,6916512,6917107,6917714,6918162,6919763,6921782,6922164,6922402,6923696	Gene ID= ENSG00000111674.8 TPM= 7.79 Transcript Type= NA
chr12	6928313	6942263	6928313	6942263	+	ENST00000396684.2@ATN1	ENST00000396684.2	protein_coding	6928313,6933840,6934176,6934465,6935547,6937845,6938481,6940880,6941374,6941747	6928384,6934028,6934313,6934578,6937561,6938067,6939177,6941023,6941554,6942263	Gene ID= ENSG00000111676.14 TPM= 35.03 Transcript Type= protein_coding
chr12	6943834	6946002	6943834	6946002	+	ENST00000537087.5@C12orf57	ENST00000537087.5	protein_coding	6943834,6944476,6945771	6944173,6944565,6946002	Gene ID= ENSG00000111678.10 TPM= 40.87 Transcript Type= protein_coding
chr12	6944023	6946002	6944023	6946002	+	ENST00000229281.5@C12orf57	ENST00000229281.5	protein_coding	6944023,6944476,6945771	6944173,6944652,6946002	Gene ID= ENSG00000111678.10 TPM= 78.23 Transcript Type= protein_coding
chr12	6946577	6961316	6946577	6961316	+	ENST00000399448.5@PTPN6	ENST00000399448.5	protein_coding	6946577,6951609,6951983,6954805,6955151,6955372,6955660,6956142,6956419,6957654,6957919,6959927,6960088,6960344,6960806,6961126	6946739,6951731,6952177,6954994,6955267,6955485,6955756,6956221,6956568,6957785,6958073,6959994,6960239,6960435,6960945,6961316	Gene ID= ENSG00000111679.16 TPM= 29.39 Transcript Type= protein_coding
chr12	6951269	6961313	6951269	6961313	+	ENST00000318974.13@PTPN6	ENST00000318974.13	protein_coding	6951269,6951609,6951983,6954805,6955151,6955372,6955660,6956142,6956419,6957654,6957919,6959927,6960088,6960344,6960806,6961126	6951520,6951731,6952177,6954994,6955267,6955485,6955756,6956221,6956568,6957785,6958073,6959994,6960239,6960435,6960945,6961313	Gene ID= ENSG00000111679.16 TPM= 202.78 Transcript Type= protein_coding
chr12	6951356	6961316	6951356	6961316	+	ENST00000416215.6@PTPN6	ENST00000416215.6	protein_coding	6951356,6951609,6954805,6955151,6955372,6955660,6956142,6956419,6957654,6957919,6959927,6960088,6960344,6960806,6961126	6951520,6952177,6954994,6955267,6955485,6955756,6956221,6956568,6957785,6958073,6959994,6960239,6960435,6960945,6961316	Gene ID= ENSG00000111679.16 TPM= 36.39 Transcript Type= retained_intron
chr12	6963246	6964447	6963246	6964447	+	ENST00000537269.1@MIR200CHG	ENST00000537269.1	lincRNA	6963246,6964201	6963348,6964447	Gene ID= ENSG00000257084.1 TPM= 5.84 Transcript Type= lincRNA
chr12	6965352	6970825	6965352	6970825	-	ENST00000535923.5@PHB2	ENST00000535923.5	protein_coding	6970417,6970196,6969498,6968411,6967892,6967676,6967171,6966424,6965911,6965352	6970825,6970280,6969577,6968595,6968021,6967779,6967248,6966500,6965916,6965712	Gene ID= ENSG00000215021.8 TPM= 40.28 Transcript Type= protein_coding
chr12	6965352	6970726	6965352	6970726	-	transcript696.chr12.nic@PHB2	transcript696.chr12.nic	protein_coding	6970417,6970196,6969498,6968411,6967171,6966424,6965911,6965352	6970726,6970280,6969577,6968595,6968021,6966500,6965916,6965712	Gene ID= ENSG00000215021.8 TPM= 4.67 Transcript Type= NA
chr12	6965354	6970623	6965354	6970623	-	ENST00000399433.6@PHB2	ENST00000399433.6	protein_coding	6970417,6970196,6969498,6968411,6967892,6967676,6967171,6966423,6965354	6970623,6970280,6969577,6968595,6968021,6967779,6967248,6966500,6965714	Gene ID= ENSG00000215021.8 TPM= 11.09 Transcript Type= protein_coding
chr12	6970893	6979941	6970893	6979941	+	ENST00000599672.5@EMG1	ENST00000599672.5	protein_coding	6970893,6974339,6974552,6975090,6975229,6975696	6971091,6974440,6974693,6975148,6975378,6979941	Gene ID= ENSG00000126749.14 TPM= 4.67 Transcript Type= protein_coding
chr12	6976186	7018510	6976186	7018510	-	ENST00000261407.8@LPCAT3	ENST00000261407.8	protein_coding	7018274,6983432,6982676,6981811,6981595,6981004,6979471,6978603,6978341,6977598,6977367,6977134,6976186	7018510,6983539,6982782,6981904,6981632,6981182,6979579,6978689,6978507,6977745,6977525,6977262,6976891	Gene ID= ENSG00000111684.10 TPM= 142.45 Transcript Type= protein_coding
chr12	7060515	7071032	7060515	7071032	+	ENST00000328916.7@C1S	ENST00000328916.7	protein_coding	7060515,7061752,7062475,7062890,7064267,7065100,7065817,7066518,7067039,7067643,7068456,7069855	7060877,7061917,7062682,7063067,7064392,7065299,7065970,7066633,7067117,7067771,7068530,7071032	Gene ID= ENSG00000182326.14 TPM= 442.9 Transcript Type= protein_coding
chr12	7080209	7092607	7080209	7092607	-	ENST00000542285.5@C1R	ENST00000542285.5	protein_coding	7092387,7091452,7090056,7089587,7089293,7088839,7088610,7086379,7085861,7082032,7080209	7092607,7091680,7090248,7089733,7089489,7088986,7088731,7086457,7086016,7082106,7081301	Gene ID= ENSG00000159403.15 TPM= 165.48 Transcript Type= protein_coding
chr12	7080419	7092420	7080419	7092420	-	transcript721.chr12.nnic@C1R	transcript721.chr12.nnic	protein_coding	7092387,7091536,7090056,7089587,7089293,7088839,7088610,7086379,7085861,7082032,7080419	7092420,7091680,7090067,7089733,7089489,7088986,7088731,7086457,7086016,7082106,7081301	Gene ID= ENSG00000159403.15 TPM= 24.97 Transcript Type= NA
chr12	7080421	7091892	7080421	7091892	-	ENST00000536053.6@C1R	ENST00000536053.6	protein_coding	7091773,7091452,7090056,7089587,7089293,7088839,7088610,7086379,7085861,7082032,7080421	7091892,7091680,7090248,7089733,7089489,7088986,7088731,7086457,7086016,7082106,7081301	Gene ID= ENSG00000159403.15 TPM= 47.36 Transcript Type= protein_coding
chr12	7080214	7092441	7080214	7092441	-	ENST00000540394.5@C1R	ENST00000540394.5	protein_coding	7091452,7090056,7089587,7088839,7088610,7086379,7085861,7082032,7080214	7092441,7090248,7089733,7089489,7088731,7086457,7086016,7082106,7081301	Gene ID= ENSG00000159403.15 TPM= 11.45 Transcript Type= retained_intron
chr12	7094554	7109273	7094554	7109273	-	ENST00000266542.8@C1RL	ENST00000266542.8	protein_coding	7109110,7108251,7101898,7099901,7099686,7094554	7109273,7108479,7102087,7100026,7099760,7097163	Gene ID= ENSG00000139178.10 TPM= 26.85 Transcript Type= protein_coding
chr12	7097285	7098036	7097285	7098036	-	transcript748.chr12.nnic@NA	transcript748.chr12.nnic	NA	7097285	7098036	Gene ID= novel_gene_chr12_749 TPM= 2.34 Transcript Type= NA
chr12	7123684	7128942	7123684	7128942	-	ENST00000266560.7@RBP5	ENST00000266560.7	protein_coding	7128703,7128240,7124629,7123684	7128942,7128418,7124730,7124174	Gene ID= ENSG00000139194.7 TPM= 2.34 Transcript Type= protein_coding
chr12	7130362	7158945	7130362	7158945	+	transcript753.chr12.nnic@CLSTN3	transcript753.chr12.nnic	protein_coding	7130362,7133024,7133573,7135327,7135804,7136206,7136829,7137955,7141242,7142086,7142869,7143163,7148972,7149523,7150544,7150928,7157489,7157941,7158509	7130712,7133146,7133768,7135535,7135953,7136391,7137110,7138067,7141404,7142139,7143026,7143311,7149198,7149693,7150689,7151063,7157691,7158089,7158945	Gene ID= ENSG00000139182.13 TPM= 7.01 Transcript Type= NA
chr12	7130199	7158945	7130199	7158945	+	ENST00000266546.10@CLSTN3	ENST00000266546.10	protein_coding	7130199,7133024,7133573,7135327,7135804,7136206,7136829,7137955,7141242,7142086,7142869,7143163,7148972,7149523,7150544,7150928,7157489,7157941	7130712,7133146,7133768,7135535,7135953,7136391,7137110,7138067,7141404,7142139,7143026,7143311,7149198,7149693,7150689,7151063,7157691,7158945	Gene ID= ENSG00000139182.13 TPM= 17.51 Transcript Type= protein_coding
chr12	7189683	7211480	7189683	7211480	+	transcript759.chr12.nic@PEX5	transcript759.chr12.nic	protein_coding	7189683,7190362,7190888,7191226,7191569,7199011,7201751,7202241,7202612,7203432,7207659,7208010,7208457,7209005,7209683,7210022	7189750,7190524,7190923,7191358,7191700,7199113,7201841,7202351,7202704,7203551,7207802,7208080,7208669,7209170,7209840,7211480	Gene ID= ENSG00000139197.10 TPM= 8.56 Transcript Type= NA
chr12	7189584	7211483	7189584	7211483	+	ENST00000266563.9@PEX5	ENST00000266563.9	protein_coding	7189584,7190362,7190888,7191226,7191569,7199011,7201751,7202612,7203432,7207659,7208010,7208457,7209005,7209683,7210022	7189750,7190524,7190923,7191358,7191700,7199113,7201841,7202704,7203551,7207802,7208080,7208669,7209170,7209840,7211483	Gene ID= ENSG00000139197.10 TPM= 10.89 Transcript Type= protein_coding
chr12	7190361	7211480	7190361	7211480	+	ENST00000266564.7@PEX5	ENST00000266564.7	protein_coding	7190361,7190888,7191226,7191569,7199011,7201751,7202241,7202612,7203456,7207659,7208010,7208457,7209005,7209683,7210022	7190524,7190923,7191358,7191700,7199113,7201841,7202351,7202704,7203551,7207802,7208080,7208669,7209170,7209840,7211480	Gene ID= ENSG00000139197.10 TPM= 7.39 Transcript Type= protein_coding
chr12	7354960	7444185	7354960	7444185	-	ENST00000313599.7@CD163L1	ENST00000313599.7	protein_coding	7444097,7441154,7433374,7432416,7406532,7403535,7398264,7396095,7378978,7375700,7375281,7374831,7374442,7373320,7369357,7368933,7368087,7367236,7357380,7354960	7444185,7441246,7433694,7432736,7406852,7403855,7398584,7396415,7379298,7376014,7375595,7374923,7374756,7373640,7369665,7368965,7368197,7367331,7357486,7355130	Gene ID= ENSG00000177675.8 TPM= 1.17 Transcript Type= protein_coding
chr12	7470813	7503893	7470813	7503893	-	ENST00000359156.8@CD163	ENST00000359156.8	protein_coding	7503645,7502478,7501139,7498868,7496813,7495081,7487773,7487359,7486894,7486499,7485096,7483367,7482966,7482643,7481161,7479860,7470813	7503893,7502564,7501462,7499188,7497133,7495401,7488087,7487673,7486986,7486813,7485416,7483675,7483004,7482762,7481256,7479996,7471397	Gene ID= ENSG00000177575.12 TPM= 15.18 Transcript Type= protein_coding
chr12	7471180	7503860	7471180	7503860	-	transcript781.chr12.nic@CD163	transcript781.chr12.nic	protein_coding	7503645,7502478,7501139,7498868,7496813,7495081,7487773,7487359,7486894,7486499,7485096,7483367,7482966,7482643,7479860,7471180	7503860,7502564,7501462,7499188,7497133,7495401,7488087,7487673,7486986,7486813,7485416,7483675,7483004,7482762,7479996,7471397	Gene ID= ENSG00000177575.12 TPM= 15.18 Transcript Type= NA
chr12	7471180	7503776	7471180	7503776	-	ENST00000432237.2@CD163	ENST00000432237.2	protein_coding	7503645,7502478,7501139,7498868,7496813,7495081,7487773,7487359,7486894,7486499,7485096,7483367,7482966,7482643,7481161,7479860,7471180	7503776,7502564,7501462,7499188,7497133,7495401,7488087,7487673,7486986,7486813,7485416,7483675,7483004,7482762,7481256,7479913,7471397	Gene ID= ENSG00000177575.12 TPM= 122.6 Transcript Type= protein_coding
chr12	8032704	8043238	8032704	8043238	+	transcript796.chr12.nic@FOXJ2	transcript796.chr12.nic	protein_coding	8032704,8039819,8042658	8033833,8040165,8043238	Gene ID= ENSG00000065970.8 TPM= 2.34 Transcript Type= NA
chr12	8032703	8055503	8032703	8055503	+	ENST00000162391.7@FOXJ2	ENST00000162391.7	protein_coding	8032703,8039819,8042658,8043701,8043951,8044760,8047882,8048697,8049362,8050522,8052762	8033833,8040165,8042732,8043769,8044091,8044958,8048289,8048798,8049571,8050620,8055503	Gene ID= ENSG00000065970.8 TPM= 18.68 Transcript Type= protein_coding
chr12	8058302	8066471	8058302	8066471	-	ENST00000307637.4@C3AR1	ENST00000307637.4	protein_coding	8066278,8058302	8066471,8060195	Gene ID= ENSG00000171860.4 TPM= 82.9 Transcript Type= protein_coding
chr12	8082211	8097777	8082211	8097777	+	ENST00000339754.10@NECAP1	ENST00000339754.10	protein_coding	8082211,8089936,8090195,8091769,8092676,8092872,8095601,8096042	8082383,8090036,8090299,8091850,8092784,8093055,8095703,8097777	Gene ID= ENSG00000089818.17 TPM= 63.63 Transcript Type= protein_coding
chr12	8082274	8097738	8082274	8097738	+	ENST00000639071.1@NECAP1	ENST00000639071.1	protein_coding	8082274,8089936,8090195,8091769,8092676,8095601,8096042	8082383,8090036,8090299,8091850,8093055,8095703,8097738	Gene ID= ENSG00000089818.17 TPM= 3.5 Transcript Type= retained_intron
chr12	8082291	8097735	8082291	8097735	+	ENST00000638883.1@NECAP1	ENST00000638883.1	protein_coding	8082291,8089936,8090195,8092676,8092872,8095601,8096042	8082383,8090036,8091850,8092784,8093055,8095703,8097735	Gene ID= ENSG00000089818.17 TPM= 1.17 Transcript Type= retained_intron
chr12	8082280	8097759	8082280	8097759	+	ENST00000537796.2@NECAP1	ENST00000537796.2	protein_coding	8082280,8089936,8090195,8091769,8095601,8096042	8082383,8090036,8090299,8093055,8095703,8097759	Gene ID= ENSG00000089818.17 TPM= 1.75 Transcript Type= retained_intron
chr12	8082280	8097771	8082280	8097771	+	ENST00000544891.6@NECAP1	ENST00000544891.6	protein_coding	8082280,8089936,8090195,8095601,8096042	8082383,8090036,8093055,8095703,8097771	Gene ID= ENSG00000089818.17 TPM= 2.34 Transcript Type= retained_intron
chr12	8123632	8138607	8123632	8138607	+	ENST00000229332.11@CLEC4A	ENST00000229332.11	protein_coding	8123632,8125561,8129264,8135585,8136788,8138140	8123960,8125677,8129362,8135736,8136903,8138607	Gene ID= ENSG00000111729.14 TPM= 8.17 Transcript Type= protein_coding
chr12	8180193	8182022	8180193	8182022	+	transcript828.chr12.nnic@NA	transcript828.chr12.nnic	NA	8180193	8182022	Gene ID= novel_gene_chr12_829 TPM= 2.34 Transcript Type= NA
chr12	8184601	8185389	8184601	8185389	+	transcript826.chr12.nnic@NA	transcript826.chr12.nnic	NA	8184601	8185389	Gene ID= novel_gene_chr12_827 TPM= 2.34 Transcript Type= NA
chr12	8226803	8238946	8226803	8238946	+	transcript834.chr12.nnic@LINC02449	transcript834.chr12.nnic	lincRNA	8226803,8235189,8238737	8227845,8235999,8238946	Gene ID= ENSG00000215241.3 TPM= 2.34 Transcript Type= NA
chr12	8533305	8540963	8533305	8540963	-	ENST00000299663.7@CLEC4E	ENST00000299663.7	protein_coding	8540761,8539855,8539217,8537115,8536090,8533305	8540963,8539947,8539306,8537266,8536205,8534809	Gene ID= ENSG00000166523.7 TPM= 1.17 Transcript Type= protein_coding
chr12	8602166	8612871	8602166	8612871	-	ENST00000229335.10@AICDA	ENST00000229335.10	protein_coding	8612760,8606865,8605215,8604807,8602166	8612871,8607012,8605485,8604922,8604337	Gene ID= ENSG00000111732.10 TPM= 1.17 Transcript Type= protein_coding
chr12	8697890	8783095	8697890	8783095	+	transcript848.chr12.nic@RIMKLB	transcript848.chr12.nic	protein_coding	8697890,8713811,8749862,8751957,8753890,8773321,8777590,8780575,8782912	8698297,8714041,8750092,8752043,8754093,8773466,8777802,8780739,8783095	Gene ID= ENSG00000166532.15 TPM= 8.17 Transcript Type= NA
chr12	8777217	8779831	8777217	8779831	-	transcript858.chr12.nnic@NA	transcript858.chr12.nnic	NA	8777217	8779831	Gene ID= novel_gene_chr12_859 TPM= 11.68 Transcript Type= NA
chr12	8914575	8941467	8914575	8941467	+	transcript863.chr12.nic@PHC1	transcript863.chr12.nic	protein_coding	8914575,8916061,8917630,8919756,8920985,8921601,8922657,8930435,8932563,8933865,8934267,8935124,8936856,8937176,8937829,8939305	8914827,8916069,8917791,8919866,8921065,8921750,8922788,8930927,8933350,8934012,8934478,8935238,8936964,8937326,8938060,8941467	Gene ID= ENSG00000111752.10 TPM= 7.68 Transcript Type= NA
chr12	8914588	8941467	8914588	8941467	+	transcript867.chr12.nic@PHC1	transcript867.chr12.nic	protein_coding	8914588,8916061,8917630,8919756,8920985,8921601,8922633,8930435,8932563,8934267,8935124,8936856,8937176,8937829,8939305	8914827,8916069,8917791,8919866,8921065,8921750,8922788,8930927,8934012,8934478,8935238,8936964,8937326,8938060,8941467	Gene ID= ENSG00000111752.10 TPM= 5.35 Transcript Type= NA
chr12	8914606	8941467	8914606	8941467	+	transcript872.chr12.nnic@PHC1	transcript872.chr12.nnic	protein_coding	8914606,8917630,8919756,8920985,8922633,8930435,8932563,8933865,8934267,8935124,8936856,8937176,8937829,8939305	8914827,8917791,8919917,8921065,8922788,8930927,8933350,8934012,8934478,8935238,8936964,8937326,8938060,8941467	Gene ID= ENSG00000111752.10 TPM= 8.85 Transcript Type= NA
chr12	8914553	8940404	8914553	8940404	+	ENST00000543824.5@PHC1	ENST00000543824.5	protein_coding	8914553,8916061,8917630,8919756,8920985,8921601,8922633,8930435,8932563,8933865,8934267,8935124,8936856,8937176,8937829,8939305	8914827,8916069,8917791,8919866,8921065,8921750,8922788,8930927,8933350,8934012,8934478,8935238,8936964,8937326,8938060,8940404	Gene ID= ENSG00000111752.10 TPM= 8.47 Transcript Type= protein_coding
chr12	8940365	8949955	8940365	8949955	-	ENST00000000412.7@M6PR	ENST00000000412.7	protein_coding	8949488,8946229,8945418,8943801,8943405,8942416,8940365	8949955,8946405,8945584,8943910,8943535,8942542,8941940	Gene ID= ENSG00000003056.7 TPM= 359.82 Transcript Type= protein_coding
chr12	8940361	8949665	8940361	8949665	-	transcript885.chr12.nic@M6PR	transcript885.chr12.nic	protein_coding	8949488,8946229,8945418,8943801,8943405,8940361	8949665,8946405,8945584,8943910,8943535,8942542	Gene ID= ENSG00000003056.7 TPM= 25.3 Transcript Type= NA
chr12	9067712	9116157	9067712	9116157	-	ENST00000318602.11@A2M	ENST00000318602.11	protein_coding	9115764,9113360,9112377,9112159,9110314,9109867,9109321,9107524,9106491,9106236,9104239,9101447,9101144,9099381,9098607,9095539,9094973,9093465,9091201,9090356,9089902,9089200,9080094,9079639,9079244,9077701,9077346,9076756,9074560,9072653,9072359,9070488,9069745,9068740,9068183,9067712	9116157,9113543,9112536,9112211,9110334,9110035,9109405,9107644,9106605,9106345,9104400,9101674,9101207,9099523,9098756,9095700,9095084,9093579,9091429,9090482,9090023,9089251,9080177,9079815,9079331,9077857,9077420,9076936,9074783,9072871,9072486,9070578,9069813,9068842,9068224,9067839	Gene ID= ENSG00000175899.14 TPM= 5477.82 Transcript Type= protein_coding
chr12	9752486	9760901	9752486	9760901	-	ENST00000228434.7@CD69	ENST00000228434.7	protein_coding	9760757,9756297,9755062,9754587,9752486	9760901,9756419,9755261,9754690,9753589	Gene ID= ENSG00000110848.8 TPM= 4.67 Transcript Type= protein_coding
chr12	9852984	9870136	9852984	9870136	-	ENST00000228438.2@CLEC2B	ENST00000228438.2	protein_coding	9869205,9862499,9857474,9854381,9852984	9870136,9862573,9857637,9854484,9853408	Gene ID= ENSG00000110852.4 TPM= 17.51 Transcript Type= protein_coding
chr12	9971409	9985595	9971409	9985595	+	transcript1037.chr12.nic@CLEC12A	transcript1037.chr12.nic	protein_coding	9971409,9971577,9978966,9979336,9980582,9982020,9984870	9971469,9971687,9979064,9979524,9980733,9982129,9985595	Gene ID= ENSG00000172322.13 TPM= 4.09 Transcript Type= NA
chr12	9971415	9985595	9971415	9985595	+	ENST00000304361.8@CLEC12A	ENST00000304361.8	protein_coding	9971415,9978966,9979336,9980582,9982020,9984870	9971687,9979064,9979524,9980733,9982129,9985595	Gene ID= ENSG00000172322.13 TPM= 19.27 Transcript Type= protein_coding
chr12	9971435	9984241	9971435	9984241	+	ENST00000434319.6@CLEC12A	ENST00000434319.6	protein_coding	9971435,9978966,9979336,9980582,9982020,9983530	9971687,9979064,9979524,9980733,9982129,9984241	Gene ID= ENSG00000172322.13 TPM= 2.34 Transcript Type= protein_coding
chr12	10093901	10097902	10093901	10097902	+	transcript1047.chr12.nnic@NA	transcript1047.chr12.nnic	NA	10093901	10097902	Gene ID= novel_gene_chr12_1048 TPM= 2.34 Transcript Type= NA
chr12	10116777	10130257	10116777	10130257	-	ENST00000534609.5@CLEC7A	ENST00000534609.5	protein_coding	10129980,10126571,10125297,10125087,10123245,10116777	10130257,10127845,10125448,10125173,10123363,10118590	Gene ID= ENSG00000172243.17 TPM= 3.5 Transcript Type= retained_intron
chr12	10116777	10130183	10116777	10130183	-	transcript1053.chr12.nnic@CLEC7A	transcript1053.chr12.nnic	protein_coding	10129980,10127747,10125297,10123245,10116777	10130183,10127845,10125448,10123363,10117523	Gene ID= ENSG00000172243.17 TPM= 2.34 Transcript Type= NA
chr12	10116777	10130259	10116777	10130259	-	transcript1056.chr12.nnic@CLEC7A	transcript1056.chr12.nnic	protein_coding	10129980,10127747,10125297,10125087,10116777	10130259,10127845,10125448,10125173,10118590	Gene ID= ENSG00000172243.17 TPM= 4.67 Transcript Type= NA
chr12	10116777	10130241	10116777	10130241	-	ENST00000353231.9@CLEC7A	ENST00000353231.9	protein_coding	10129980,10127747,10125297,10123245,10116777	10130241,10127845,10125448,10123363,10118590	Gene ID= ENSG00000172243.17 TPM= 14.01 Transcript Type= protein_coding
chr12	10127327	10130189	10127327	10130189	-	ENST00000310002.4@CLEC7A	ENST00000310002.4	protein_coding	10129980,10127747,10127327	10130189,10127845,10127442	Gene ID= ENSG00000172243.17 TPM= 2.34 Transcript Type= protein_coding
chr12	10158301	10167661	10158301	10167661	-	transcript1068.chr12.nic@OLR1	transcript1068.chr12.nic	protein_coding	10167578,10166712,10160786,10160347,10158301	10167661,10166957,10160925,10160462,10160021	Gene ID= ENSG00000173391.8 TPM= 5.84 Transcript Type= NA
chr12	10158301	10172138	10158301	10172138	-	ENST00000309539.7@OLR1	ENST00000309539.7	protein_coding	10172002,10169074,10166712,10160786,10160347,10158301	10172138,10169175,10166957,10160925,10160462,10160021	Gene ID= ENSG00000173391.8 TPM= 158.79 Transcript Type= protein_coding
chr12	10170729	10175522	10170729	10175522	+	ENST00000545924.1@TMEM52B	ENST00000545924.1	protein_coding	10170729,10175282	10170851,10175522	Gene ID= ENSG00000165685.8 TPM= 1.17 Transcript Type= processed_transcript
chr12	10179013	10191801	10179013	10191801	+	ENST00000298530.7@TMEM52B	ENST00000298530.7	protein_coding	10179013,10185330,10186420,10189896	10179628,10185368,10186589,10191801	Gene ID= ENSG00000165685.8 TPM= 3.5 Transcript Type= protein_coding
chr12	10212897	10223128	10212897	10223128	+	transcript1079.chr12.nic@GABARAPL1	transcript1079.chr12.nic	protein_coding	10212897,10214669,10218063,10220440,10221787	10214187,10214779,10218141,10220558,10223128	Gene ID= ENSG00000139112.10 TPM= 5.25 Transcript Type= NA
chr12	10212805	10223130	10212805	10223130	+	ENST00000266458.9@GABARAPL1	ENST00000266458.9	protein_coding	10212805,10218063,10220440,10221787	10213219,10218141,10220558,10223130	Gene ID= ENSG00000139112.10 TPM= 144.2 Transcript Type= protein_coding
chr12	10307818	10317251	10307818	10317251	+	ENST00000336164.8@KLRD1	ENST00000336164.8	protein_coding	10307818,10309388,10309626,10311464,10313410,10314673	10308084,10309480,10309688,10311615,10313513,10317251	Gene ID= ENSG00000134539.16 TPM= 2.34 Transcript Type= protein_coding
chr12	10315992	10320260	10315992	10320260	+	transcript1094.chr12.nnic@NA	transcript1094.chr12.nnic	NA	10315992	10320260	Gene ID= novel_gene_chr12_1095 TPM= 2.34 Transcript Type= NA
chr12	10363710	10379884	10363710	10379884	+	transcript1097.chr12.nic@AC022075.1	transcript1097.chr12.nic	antisense_RNA	10363710,10374035,10379702	10364033,10374136,10379884	Gene ID= ENSG00000245648.1 TPM= 2.34 Transcript Type= NA
chr12	10430599	10435993	10430599	10435993	-	ENST00000381902.6@KLRC2	ENST00000381902.6	protein_coding	10435800,10435312,10434486,10433791,10432106,10430599	10435993,10435410,10434530,10433942,10432206,10431228	Gene ID= ENSG00000205809.9 TPM= 1.17 Transcript Type= protein_coding
chr12	10446031	10453330	10446031	10453330	-	ENST00000347831.9@KLRC1	ENST00000347831.9	protein_coding	10453198,10450970,10450484,10449237,10447532,10446031	10453330,10451187,10450579,10449388,10447632,10446662	Gene ID= ENSG00000134545.13 TPM= 1.17 Transcript Type= protein_coding
chr12	10604190	10613623	10604190	10613623	-	ENST00000320756.6@MAGOHB	ENST00000320756.6	protein_coding	10613439,10610622,10609831,10607854,10604190	10613623,10610680,10609941,10607936,10606374	Gene ID= ENSG00000111196.9 TPM= 1.17 Transcript Type= protein_coding
chr12	10699089	10723328	10699089	10723328	-	transcript1126.chr12.nic@YBX3	transcript1126.chr12.nic	protein_coding	10722850,10719080,10718088,10715694,10713211,10709908,10704051,10701960,10701254,10699089	10723328,10719143,10718121,10715783,10713333,10710788,10704148,10702134,10701353,10699654	Gene ID= ENSG00000060138.12 TPM= 21.22 Transcript Type= NA
chr12	10699089	10723352	10699089	10723352	-	transcript1136.chr12.nic@YBX3	transcript1136.chr12.nic	protein_coding	10722850,10719080,10718088,10715694,10709908,10704051,10701960,10701254,10699089	10723352,10719143,10718121,10715783,10713333,10704148,10702134,10701353,10699654	Gene ID= ENSG00000060138.12 TPM= 25.3 Transcript Type= NA
chr12	10699089	10723307	10699089	10723307	-	ENST00000279550.11@YBX3	ENST00000279550.11	protein_coding	10722850,10719080,10718088,10715694,10713211,10704051,10701960,10701254,10699089	10723307,10719143,10718121,10715783,10713333,10704148,10702134,10701353,10699654	Gene ID= ENSG00000060138.12 TPM= 284.89 Transcript Type= protein_coding
chr12	10699213	10723312	10699213	10723312	-	ENST00000228251.8@YBX3	ENST00000228251.8	protein_coding	10722850,10719080,10718088,10715694,10713211,10709908,10704051,10701960,10701254,10699213	10723312,10719143,10718121,10715783,10713333,10710114,10704148,10702134,10701353,10699654	Gene ID= ENSG00000060138.12 TPM= 17.51 Transcript Type= protein_coding
chr12	10937408	11171618	10937408	11171618	-	transcript1153.chr12.nic@PRH1	transcript1153.chr12.nic	protein_coding	11171422,11047020,10973655,10937408	11171618,11047188,10973721,10938577	Gene ID= ENSG00000231887.6 TPM= 2.34 Transcript Type= NA
chr12	11171222	11176016	11171222	11176016	+	ENST00000622602.1@SMIM10L1	ENST00000622602.1	protein_coding	11171222	11176016	Gene ID= ENSG00000256537.4 TPM= 5.84 Transcript Type= protein_coding
chr12	11649674	11855156	11649674	11855156	+	transcript1178.chr12.nic@ETV6	transcript1178.chr12.nic	protein_coding	11649674,11752450,11839140,11853427	11650160,11752579,11839304,11855156	Gene ID= ENSG00000139083.10 TPM= 3.5 Transcript Type= NA
chr12	11649854	11895402	11649854	11895402	+	ENST00000396373.8@ETV6	ENST00000396373.8	protein_coding	11649854,11752450,11839140,11853427,11869424,11884445,11885926,11890941	11650160,11752579,11839304,11853561,11869969,11884587,11886026,11895402	Gene ID= ENSG00000139083.10 TPM= 99.25 Transcript Type= protein_coding
chr12	12070939	12099695	12070939	12099695	+	ENST00000308721.9@BCL2L14	ENST00000308721.9	protein_coding	12070939,12079299,12087213,12090779,12094664,12098950	12071137,12079738,12087386,12090849,12094930,12099695	Gene ID= ENSG00000121380.12 TPM= 1.17 Transcript Type= protein_coding
chr12	12326056	12350541	12326056	12350541	-	ENST00000535902.5@MANSC1	ENST00000535902.5	protein_coding	12350078,12343092,12338420,12326056	12350541,12343414,12338560,12330958	Gene ID= ENSG00000111261.13 TPM= 19.85 Transcript Type= protein_coding
chr12	12329265	12350241	12329265	12350241	-	ENST00000396349.3@MANSC1	ENST00000396349.3	protein_coding	12350078,12343276,12343092,12338420,12329265	12350241,12343414,12343173,12338560,12330958	Gene ID= ENSG00000111261.13 TPM= 3.5 Transcript Type= protein_coding
chr12	12355406	12357067	12355406	12357067	-	ENST00000381800.3@LOH12CR2	ENST00000381800.3	lincRNA	12356928,12355406	12357067,12356805	Gene ID= ENSG00000205791.3 TPM= 1.17 Transcript Type= lincRNA
chr12	12357121	12469694	12357121	12469694	+	ENST00000314565.8@BORCS5	ENST00000314565.8	protein_coding	12357121,12361206,12435628,12465546	12357509,12361349,12435785,12469694	Gene ID= ENSG00000165714.10 TPM= 5.84 Transcript Type= protein_coding
chr12	12474210	12562383	12474210	12562383	-	ENST00000298573.8@DUSP16	ENST00000298573.8	protein_coding	12562117,12520871,12519862,12500519,12487028,12480223,12474210	12562383,12521463,12520000,12500682,12487187,12480346,12478015	Gene ID= ENSG00000111266.8 TPM= 12.84 Transcript Type= protein_coding
chr12	12535345	12539766	12535345	12539766	+	transcript1210.chr12.nnic@NA	transcript1210.chr12.nnic	NA	12535345	12539766	Gene ID= novel_gene_chr12_1211 TPM= 4.67 Transcript Type= NA
chr12	12611892	12645108	12611892	12645108	+	ENST00000228865.2@CREBL2	ENST00000228865.2	protein_coding	12611892,12635777,12637570,12641994	12612187,12635974,12637714,12645108	Gene ID= ENSG00000111269.2 TPM= 45.54 Transcript Type= protein_coding
chr12	12717124	12722371	12717124	12722371	+	ENST00000228872.8@CDKN1B	ENST00000228872.8	protein_coding	12717124,12718825,12721036	12718314,12718954,12722371	Gene ID= ENSG00000111276.10 TPM= 12.84 Transcript Type= protein_coding
chr12	12785607	12791466	12785607	12791466	+	ENST00000356591.4@APOLD1	ENST00000356591.4	protein_coding	12785607,12786909	12785694,12791466	Gene ID= ENSG00000178878.12 TPM= 31.53 Transcript Type= protein_coding
chr12	12813346	12829981	12813346	12829981	+	ENST00000358007.7@DDX47	ENST00000358007.7	protein_coding	12813346,12814131,12821208,12821655,12821965,12822661,12823203,12823870,12824540,12826000,12827246,12829423	12813454,12814224,12821396,12821726,12822083,12822732,12823319,12824016,12824677,12826070,12827375,12829981	Gene ID= ENSG00000213782.7 TPM= 42.03 Transcript Type= protein_coding
chr12	12820541	12829979	12820541	12829979	+	transcript1227.chr12.nnic@DDX47	transcript1227.chr12.nnic	protein_coding	12820541,12821208,12821655,12821965,12822661,12823203,12823870,12824540,12826000,12827246,12829423	12820736,12821396,12821726,12822083,12822732,12823319,12824016,12824677,12826070,12827375,12829979	Gene ID= ENSG00000213782.7 TPM= 4.67 Transcript Type= NA
chr12	12813344	12829979	12813344	12829979	+	transcript1229.chr12.nic@DDX47	transcript1229.chr12.nic	protein_coding	12813344,12814131,12821208,12821655,12821965,12822661,12823203,12826000,12827246,12829423	12813454,12814224,12821396,12821726,12822083,12822732,12824677,12826070,12827375,12829979	Gene ID= ENSG00000213782.7 TPM= 2.34 Transcript Type= NA
chr12	12890782	12917937	12890782	12917937	+	ENST00000014914.5@GPRC5A	ENST00000014914.5	protein_coding	12890782,12908243,12912084,12912447	12891664,12909171,12912142,12917937	Gene ID= ENSG00000013588.7 TPM= 1778.71 Transcript Type= protein_coding
chr12	12897611	12899658	12897611	12899658	-	transcript1253.chr12.nnic@NA	transcript1253.chr12.nnic	NA	12897611	12899658	Gene ID= novel_gene_chr12_1254 TPM= 9.34 Transcript Type= NA
chr12	12914561	12916840	12914561	12916840	-	transcript1247.chr12.nnic@NA	transcript1247.chr12.nnic	NA	12915814,12915067,12914561	12916840,12915654,12914661	Gene ID= novel_gene_chr12_1248 TPM= 3.5 Transcript Type= NA
chr12	12927758	12980562	12927758	12980562	+	ENST00000543515.6@GPRC5D-AS1	ENST00000543515.6	antisense_RNA	12927758,12979524,12980000	12927803,12979622,12980562	Gene ID= ENSG00000247498.9 TPM= 2.34 Transcript Type= antisense_RNA
chr12	12974864	13000273	12974864	13000273	-	ENST00000014930.8@HEBP1	ENST00000014930.8	protein_coding	13000037,12989277,12987152,12974864	13000273,12989415,12987332,12975479	Gene ID= ENSG00000013583.8 TPM= 154.12 Transcript Type= protein_coding
chr12	13000420	13004830	13000420	13004830	+	ENST00000624664.1@HTR7P1	ENST00000624664.1	transcribed_processed_pseudogene	13000420	13004830	Gene ID= ENSG00000183935.5 TPM= 7.01 Transcript Type= TEC
chr12	13044284	13083449	13044284	13083449	+	ENST00000197268.12@FAM234B	ENST00000197268.12	protein_coding	13044284,13055551,13058451,13061575,13062845,13066640,13067155,13068304,13068630,13071241,13076026,13079789,13080625	13044440,13055946,13058549,13061763,13062975,13066787,13067296,13068447,13068711,13071396,13076143,13080009,13083449	Gene ID= ENSG00000084444.13 TPM= 11.68 Transcript Type= protein_coding
chr12	13198938	13201453	13198938	13201453	+	transcript1270.chr12.nnic@NA	transcript1270.chr12.nnic	NA	13198938	13201453	Gene ID= novel_gene_chr12_1271 TPM= 2.34 Transcript Type= NA
chr12	14365632	14502935	14365632	14502935	+	ENST00000261168.8@ATF7IP	ENST00000261168.8	protein_coding	14365632,14423909,14434337,14436106,14438130,14446988,14456561,14457207,14460495,14466526,14475890,14478317,14481003,14496231,14497654	14365827,14425473,14434423,14436251,14438267,14447053,14456634,14457295,14461133,14466590,14475968,14478472,14481185,14496343,14502935	Gene ID= ENSG00000171681.12 TPM= 18.68 Transcript Type= protein_coding
chr12	14365677	14476432	14365677	14476432	+	ENST00000537653.5@ATF7IP	ENST00000537653.5	protein_coding	14365677,14423909,14434337,14436106,14438130,14446988,14456561,14457207,14460495,14466526,14475890	14365827,14425473,14434423,14436251,14438267,14447053,14456634,14457295,14461133,14466590,14476432	Gene ID= ENSG00000171681.12 TPM= 3.5 Transcript Type= retained_intron
chr12	14365676	14426850	14365676	14426850	+	transcript1282.chr12.nic@ATF7IP	transcript1282.chr12.nic	protein_coding	14365676,14423909	14365827,14426850	Gene ID= ENSG00000171681.12 TPM= 3.5 Transcript Type= NA
chr12	14503661	14568349	14503661	14568349	-	ENST00000240617.9@PLBD1	ENST00000240617.9	protein_coding	14567582,14553193,14542208,14540764,14536570,14535659,14511511,14511260,14506933,14506162,14503661	14568349,14553412,14542291,14540902,14536710,14535803,14511711,14511400,14507118,14506268,14503954	Gene ID= ENSG00000121316.10 TPM= 143.61 Transcript Type= protein_coding
chr12	14774337	14778000	14774337	14778000	+	transcript1296.chr12.nnic@NA	transcript1296.chr12.nnic	NA	14774337	14778000	Gene ID= novel_gene_chr12_1297 TPM= 5.84 Transcript Type= NA
chr12	14774383	14775026	14774383	14775026	+	ENST00000544848.2@H2AFJ	ENST00000544848.2	protein_coding	14774383	14775026	Gene ID= ENSG00000246705.4 TPM= 33.86 Transcript Type= protein_coding
chr12	14774419	14775581	14774419	14775581	+	ENST00000389078.3@H2AFJ	ENST00000389078.3	protein_coding	14774419,14775291	14774912,14775581	Gene ID= ENSG00000246705.4 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr12	14784579	14803540	14784579	14803540	-	ENST00000261167.6@WBP11	ENST00000261167.6	protein_coding	14803352,14801320,14800752,14799635,14796807,14794971,14794537,14793731,14791169,14790456,14788951,14784579	14803540,14801428,14800783,14799728,14797003,14795104,14794736,14793922,14791270,14790749,14789133,14787498	Gene ID= ENSG00000084463.7 TPM= 7.01 Transcript Type= protein_coding
chr12	14803572	14824415	14803572	14824415	+	ENST00000330828.2@C12orf60	ENST00000330828.2	protein_coding	14803572,14822912	14803751,14824415	Gene ID= ENSG00000182993.3 TPM= 1.17 Transcript Type= protein_coding
chr12	14881181	14885926	14881181	14885926	-	ENST00000539261.5@MGP	ENST00000539261.5	protein_coding	14885731,14884213,14882972,14881181	14885926,14884245,14883047,14882280	Gene ID= ENSG00000111341.9 TPM= 92.24 Transcript Type= protein_coding
chr12	14942017	14961669	14942017	14961669	-	ENST00000228945.8@ARHGDIB	ENST00000228945.8	protein_coding	14961537,14950532,14949802,14947873,14944776,14942017	14961669,14950724,14949885,14947949,14944839,14942721	Gene ID= ENSG00000111348.8 TPM= 145.95 Transcript Type= protein_coding
chr12	15107783	15221474	15107783	15221474	-	transcript1325.chr12.nnic@RERG	transcript1325.chr12.nnic	protein_coding	15221195,15217429,15121063,15111344,15107783	15221474,15217603,15121119,15111417,15109549	Gene ID= ENSG00000134533.6 TPM= 2.92 Transcript Type= NA
chr12	15107783	15221417	15107783	15221417	-	ENST00000256953.6@RERG	ENST00000256953.6	protein_coding	15221195,15217429,15121063,15111344,15107783	15221417,15217603,15121119,15111417,15109517	Gene ID= ENSG00000134533.6 TPM= 19.27 Transcript Type= protein_coding
chr12	15546352	15597399	15546352	15597399	+	ENST00000542557.5@PTPRO	ENST00000542557.5	protein_coding	15546352,15549094,15551551,15557455,15565593,15569417,15578853,15580039,15580697,15581679,15586897,15589455,15594937,15596090	15546708,15549226,15551671,15557523,15565628,15569498,15578943,15580115,15580831,15581801,15587051,15589590,15595057,15597399	Gene ID= ENSG00000151490.13 TPM= 5.25 Transcript Type= protein_coding
chr12	15546352	15597399	15546352	15597399	+	ENST00000442921.6@PTPRO	ENST00000442921.6	protein_coding	15546352,15549094,15551551,15557455,15560193,15565593,15569417,15578853,15580039,15580697,15581679,15586897,15589455,15594937,15596090	15546708,15549226,15551671,15557523,15560276,15565628,15569498,15578943,15580115,15580831,15581801,15587051,15589590,15595057,15597399	Gene ID= ENSG00000151490.13 TPM= 1.75 Transcript Type= protein_coding
chr12	15546352	15597399	15546352	15597399	+	ENST00000544244.5@PTPRO	ENST00000544244.5	protein_coding	15546352,15549094,15551551,15557455,15565593,15569417,15578853,15580039,15580697,15581679,15586897,15589455,15594937	15546708,15549226,15551671,15557523,15565628,15569498,15578943,15580115,15580831,15581801,15587051,15589590,15597399	Gene ID= ENSG00000151490.13 TPM= 1.17 Transcript Type= protein_coding
chr12	15620162	15789408	15620162	15789408	-	transcript1335.chr12.nnic@EPS8	transcript1335.chr12.nnic	protein_coding	15789161,15713266,15682893,15681226,15670856,15669664,15669387,15666440,15665756,15662026,15660614,15658497,15658079,15654145,15650823,15647127,15641722,15640703,15631442,15624227,15623158,15620162	15789408,15713325,15682972,15681302,15670923,15669825,15669536,15666522,15665892,15662099,15660740,15658585,15658153,15654293,15651006,15647260,15641830,15640846,15631664,15624407,15623287,15621430	Gene ID= ENSG00000151491.12 TPM= 12.26 Transcript Type= NA
chr12	15620162	15789576	15620162	15789576	-	ENST00000281172.9@EPS8	ENST00000281172.9	protein_coding	15789161,15682893,15681226,15670856,15669664,15669387,15666440,15665756,15662026,15660614,15658497,15658079,15654145,15650823,15647127,15641722,15640703,15631442,15624227,15623158,15620162	15789576,15682972,15681302,15670923,15669825,15669536,15666522,15665892,15662099,15660740,15658585,15658153,15654293,15651006,15647260,15641830,15640846,15631664,15624407,15623287,15621430	Gene ID= ENSG00000151491.12 TPM= 84.65 Transcript Type= protein_coding
chr12	15771911	15772550	15771911	15772550	+	transcript1342.chr12.nnic@NA	transcript1342.chr12.nnic	NA	15771911	15772550	Gene ID= novel_gene_chr12_1343 TPM= 2.34 Transcript Type= NA
chr12	15882395	15903478	15882395	15903478	+	ENST00000419869.6@STRAP	ENST00000419869.6	protein_coding	15882395,15883541,15889928,15890597,15894047,15895359,15897882,15899904,15900947,15902917	15882819,15883676,15890009,15890669,15894143,15895496,15898018,15900053,15901012,15903478	Gene ID= ENSG00000023734.10 TPM= 192.07 Transcript Type= protein_coding
chr12	15882391	15903442	15882391	15903442	+	ENST00000541731.1@STRAP	ENST00000541731.1	protein_coding	15882391,15889928,15890597,15894047,15895359,15897882,15899904,15900947,15902917	15882819,15890009,15890669,15894143,15895496,15898018,15900053,15901012,15903442	Gene ID= ENSG00000023734.10 TPM= 19.85 Transcript Type= nonsense_mediated_decay
chr12	15911172	16037282	15911172	16037282	+	ENST00000428559.6@DERA	ENST00000428559.6	protein_coding	15911172,15956936,15958188,15959829,15962813,15982308,16032542,16036232,16036690	15911414,15957033,15958335,15959924,15962947,15982436,16032654,16036381,16037282	Gene ID= ENSG00000023697.12 TPM= 64.8 Transcript Type= protein_coding
chr12	15911337	16037282	15911337	16037282	+	transcript1352.chr12.nic@DERA	transcript1352.chr12.nic	protein_coding	15911337,15956936,15958240,15959829,15962813,15982308,16032542,16036232,16036690	15911414,15957033,15958335,15959924,15962947,15982436,16032654,16036381,16037282	Gene ID= ENSG00000023697.12 TPM= 2.92 Transcript Type= NA
chr12	15911300	16037282	15911300	16037282	+	transcript1356.chr12.nic@DERA	transcript1356.chr12.nic	protein_coding	15911300,15956936,15958188,15959829,15962813,15982308,16032542	15911414,15957033,15958335,15959924,15962947,15982436,16037282	Gene ID= ENSG00000023697.12 TPM= 3.5 Transcript Type= NA
chr12	16347649	16364403	16347649	16364403	+	ENST00000396210.7@MGST1	ENST00000396210.7	protein_coding	16347649,16354231,16357605,16363795	16347710,16354378,16357699,16364403	Gene ID= ENSG00000008394.12 TPM= 258.24 Transcript Type= protein_coding
chr12	16548424	16606497	16548424	16606497	-	transcript1378.chr12.nic@LMO3	transcript1378.chr12.nic	protein_coding	16606339,16606066,16600655,16560413,16548424	16606497,16606132,16600868,16560538,16551327	Gene ID= ENSG00000048540.14 TPM= 5.13 Transcript Type= NA
chr12	16548420	16608135	16548420	16608135	-	ENST00000441439.6@LMO3	ENST00000441439.6	protein_coding	16607936,16606066,16600655,16560413,16548420	16608135,16606132,16600868,16560538,16551327	Gene ID= ENSG00000048540.14 TPM= 8.63 Transcript Type= protein_coding
chr12	16548373	16605379	16548373	16605379	-	ENST00000261169.10@LMO3	ENST00000261169.10	protein_coding	16604865,16600655,16560413,16548373	16605379,16600868,16560538,16551327	Gene ID= ENSG00000048540.14 TPM= 7.46 Transcript Type= protein_coding
chr12	16548373	16608214	16548373	16608214	-	ENST00000354662.5@LMO3	ENST00000354662.5	protein_coding	16607936,16600655,16560413,16548373	16608214,16600868,16560538,16551327	Gene ID= ENSG00000048540.14 TPM= 9.8 Transcript Type= protein_coding
chr12	16548373	16606596	16548373	16606596	-	transcript1389.chr12.nic@LMO3	transcript1389.chr12.nic	protein_coding	16606066,16600714,16560413,16548373	16606596,16600868,16560538,16551327	Gene ID= ENSG00000048540.14 TPM= 5.23 Transcript Type= NA
chr12	16548424	16606494	16548424	16606494	-	transcript1391.chr12.nic@LMO3	transcript1391.chr12.nic	protein_coding	16606066,16600601,16560413,16548424	16606494,16600868,16560538,16551327	Gene ID= ENSG00000048540.14 TPM= 6.4 Transcript Type= NA
chr12	19129768	19376400	19129768	19376400	+	transcript1404.chr12.nnic@PLEKHA5	transcript1404.chr12.nnic	protein_coding	19129768,19130051,19132393,19253940,19255045,19257433,19260949,19265750,19269770,19274516,19283280,19287473,19320562,19322310,19322518,19336515,19343323,19345842,19348399,19353884,19358228,19359412,19361582,19365964,19369693,19375531	19129888,19130130,19132450,19254023,19255165,19257537,19261021,19265850,19269885,19274983,19283745,19287556,19320624,19322390,19322667,19336616,19343419,19345888,19348519,19354002,19358437,19359546,19361706,19366109,19369798,19376400	Gene ID= ENSG00000052126.14 TPM= 3.5 Transcript Type= NA
chr12	19129794	19376400	19129794	19376400	+	ENST00000299275.10@PLEKHA5	ENST00000299275.10	protein_coding	19129794,19130051,19132393,19253940,19255045,19257433,19260949,19265750,19269770,19274516,19283280,19287473,19320562,19322310,19322518,19336515,19343323,19345842,19348399,19353884,19358228,19359412,19361582,19365964,19369693,19375531	19129888,19130130,19132450,19254023,19255165,19257537,19261021,19265850,19269885,19274983,19283745,19287556,19320624,19322390,19322667,19336616,19343434,19345888,19348519,19354002,19358437,19359546,19361706,19366109,19369798,19376400	Gene ID= ENSG00000052126.14 TPM= 16.35 Transcript Type= protein_coding
chr12	19439699	19520224	19439699	19520224	+	ENST00000266508.13@AEBP2	ENST00000266508.13	protein_coding	19439699,19462510,19473248,19493800,19500097,19512398,19514671,19518087	19440370,19462717,19473355,19493986,19500221,19512465,19514784,19520224	Gene ID= ENSG00000139154.14 TPM= 12.84 Transcript Type= protein_coding
chr12	19439671	19441780	19439671	19441780	+	transcript1424.chr12.nnic@NA	transcript1424.chr12.nnic	NA	19439671	19441780	Gene ID= novel_gene_chr12_1425 TPM= 2.34 Transcript Type= NA
chr12	19510867	19514835	19510867	19514835	-	transcript1426.chr12.nnic@NA	transcript1426.chr12.nnic	NA	19510867	19514835	Gene ID= novel_gene_chr12_1427 TPM= 3.5 Transcript Type= NA
chr12	21264600	21395437	21264600	21395437	-	ENST00000307378.10@SLCO1A2	ENST00000307378.10	protein_coding	21394906,21374399,21334588,21318782,21314549,21306882,21304427,21301171,21300348,21297404,21295597,21293945,21292164,21275360,21274469,21264600	21395437,21374525,21334709,21318923,21314681,21306988,21304573,21301269,21300569,21297568,21295792,21294110,21292336,21275424,21274586,21269767	Gene ID= ENSG00000084453.16 TPM= 1.17 Transcript Type= protein_coding
chr12	21437677	21471252	21437677	21471252	+	ENST00000240651.13@PYROXD1	ENST00000240651.13	protein_coding	21437677,21440368,21445347,21449563,21452081,21455132,21455995,21461025,21462008,21462740,21467481,21468506	21437814,21440448,21445466,21449691,21452154,21455292,21456095,21461154,21462120,21462862,21467618,21471252	Gene ID= ENSG00000121350.15 TPM= 14.01 Transcript Type= protein_coding
chr12	21468813	21501643	21468813	21501643	-	transcript1435.chr12.nic@RECQL	transcript1435.chr12.nic	protein_coding	21501463,21501170,21499555,21491519,21490199,21486479,21483376,21477803,21476911,21475676,21475468,21474841,21473551,21471428,21470969,21468813	21501643,21501372,21499615,21491716,21490378,21486585,21483574,21477969,21476992,21475824,21475585,21474979,21473642,21471647,21471098,21470346	Gene ID= ENSG00000004700.15 TPM= 2.34 Transcript Type= NA
chr12	21468911	21501643	21468911	21501643	-	transcript1438.chr12.nic@RECQL	transcript1438.chr12.nic	protein_coding	21501463,21501170,21499555,21491519,21490199,21486479,21483376,21477803,21476911,21475676,21475468,21474841,21473551,21471428,21470969,21468911	21501643,21501215,21499615,21491716,21490378,21486585,21483574,21477969,21476992,21475824,21475585,21474979,21473642,21471647,21471098,21470346	Gene ID= ENSG00000004700.15 TPM= 7.01 Transcript Type= NA
chr12	21468911	21501593	21468911	21501593	-	ENST00000444129.6@RECQL	ENST00000444129.6	protein_coding	21501170,21499555,21491519,21490199,21486479,21483376,21477803,21476911,21475676,21475468,21474841,21473551,21471428,21470969,21468911	21501593,21499615,21491716,21490378,21486585,21483574,21477969,21476992,21475824,21475585,21474979,21473642,21471647,21471098,21470346	Gene ID= ENSG00000004700.15 TPM= 38.53 Transcript Type= protein_coding
chr12	21501815	21518408	21501815	21518408	+	ENST00000229314.9@GOLT1B	ENST00000229314.9	protein_coding	21501815,21506885,21508383,21512295,21515669	21501948,21506976,21508561,21512376,21518408	Gene ID= ENSG00000111711.9 TPM= 5.84 Transcript Type= protein_coding
chr12	21527435	21532523	21527435	21532523	+	ENST00000535139.5@SPX	ENST00000535139.5	protein_coding	21527435,21529001,21531137	21527789,21529084,21532523	Gene ID= ENSG00000134548.9 TPM= 1.17 Transcript Type= retained_intron
chr12	21635342	21657842	21635342	21657842	-	ENST00000350669.5@LDHB	ENST00000350669.5	protein_coding	21657751,21654543,21646899,21643935,21641952,21638353,21637071,21635342	21657842,21654677,21647016,21644108,21642125,21638470,21637194,21635709	Gene ID= ENSG00000111716.12 TPM= 329.26 Transcript Type= protein_coding
chr12	21764955	21774821	21764955	21774821	-	ENST00000240662.2@KCNJ8	ENST00000240662.2	protein_coding	21774546,21773243,21764955	21774821,21773686,21766623	Gene ID= ENSG00000121361.3 TPM= 15.18 Transcript Type= protein_coding
chr12	21768016	21770383	21768016	21770383	+	transcript1478.chr12.nnic@NA	transcript1478.chr12.nnic	NA	21768016	21770383	Gene ID= novel_gene_chr12_1479 TPM= 2.34 Transcript Type= NA
chr12	21798778	21941398	21798778	21941398	-	transcript1480.chr12.nic@ABCC9	transcript1480.chr12.nic	protein_coding	21941200,21940710,21936533,21933782,21925942,21916937,21915668,21912872,21910826,21910157,21908077,21906126,21895275,21894032,21887826,21882766,21875654,21872625,21864439,21862953,21860971,21859586,21852368,21852097,21848150,21845603,21844767,21844483,21842314,21838078,21828958,21818150,21817187,21815763,21814644,21812049,21809852,21807346,21805998,21798778	21941398,21940825,21936694,21933923,21926063,21917103,21915910,21913066,21910978,21910312,21908211,21906288,21895315,21894174,21887934,21882873,21875726,21872730,21864477,21863054,21861055,21859666,21852505,21852222,21848246,21845832,21844915,21844552,21842471,21838170,21829060,21818251,21817307,21815893,21814722,21812157,21809955,21807479,21806060,21801181	Gene ID= ENSG00000069431.11 TPM= 4.67 Transcript Type= NA
chr12	22046174	22065663	22046174	22065663	+	ENST00000229329.6@CMAS	ENST00000229329.6	protein_coding	22046174,22055149,22055455,22058567,22060832,22061281,22062281,22065121	22046563,22055291,22055610,22058700,22060926,22061452,22062434,22065663	Gene ID= ENSG00000111726.12 TPM= 74.73 Transcript Type= protein_coding
chr12	22046225	22065674	22046225	22065674	+	ENST00000534981.5@CMAS	ENST00000534981.5	protein_coding	22046225,22055149,22055455,22058567,22060832,22062281,22065121	22046563,22055291,22055610,22058700,22060926,22062434,22065674	Gene ID= ENSG00000111726.12 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr12	22193391	22334714	22193391	22334714	-	ENST00000396037.8@ST8SIA1	ENST00000396037.8	protein_coding	22333997,22287149,22255280,22249006,22193391	22334714,22287293,22255389,22249098,22202038	Gene ID= ENSG00000111728.10 TPM= 1.17 Transcript Type= protein_coding
chr12	22448583	22544518	22448583	22544518	-	transcript1495.chr12.nic@C2CD5	transcript1495.chr12.nic	protein_coding	22544061,22535258,22527721,22525610,22524472,22523426,22517986,22513294,22506711,22493223,22490123,22484697,22482557,22478313,22474751,22472744,22472286,22471967,22471399,22470824,22469709,22456971,22453896,22448583	22544518,22535344,22527892,22525705,22524627,22523624,22518137,22513379,22506819,22493337,22490218,22484888,22482743,22478477,22474891,22472807,22472347,22472065,22471488,22470911,22469795,22457161,22454042,22449891	Gene ID= ENSG00000111731.12 TPM= 14.01 Transcript Type= NA
chr12	22448583	22544546	22448583	22544546	-	ENST00000333957.8@C2CD5	ENST00000333957.8	protein_coding	22544320,22544061,22535258,22527721,22525610,22524472,22523426,22517986,22513294,22506711,22493223,22490123,22484697,22482557,22478313,22474751,22472744,22472286,22471967,22471399,22470824,22469709,22456971,22453896,22448583	22544546,22544179,22535344,22527892,22525705,22524627,22523624,22518137,22513379,22506819,22493337,22490218,22484888,22482743,22478477,22474891,22472807,22472347,22472065,22471488,22470911,22469795,22457161,22454042,22449891	Gene ID= ENSG00000111731.12 TPM= 17.51 Transcript Type= protein_coding
chr12	22625075	22690665	22625075	22690665	+	ENST00000266517.8@ETNK1	ENST00000266517.8	protein_coding	22625075,22643763,22659014,22661063,22671272,22673500,22684483,22684882	22625586,22644022,22659154,22661205,22671355,22673660,22684556,22690665	Gene ID= ENSG00000139163.15 TPM= 2.34 Transcript Type= protein_coding
chr12	22631179	22635219	22631179	22635219	-	transcript1507.chr12.nnic@NA	transcript1507.chr12.nnic	NA	22631179	22635219	Gene ID= novel_gene_chr12_1508 TPM= 2.34 Transcript Type= NA
chr12	22662394	22665281	22662394	22665281	-	transcript1509.chr12.nnic@NA	transcript1509.chr12.nnic	NA	22662394	22665281	Gene ID= novel_gene_chr12_1510 TPM= 15.18 Transcript Type= NA
chr12	24811349	24903066	24811349	24903066	-	transcript1512.chr12.nnic@BCAT1	transcript1512.chr12.nnic	protein_coding	24902947,24901963,24901814,24894275,24881301,24878530,24849786,24842082,24836511,24832723,24829823,24811349	24903066,24902315,24901885,24894475,24881411,24878649,24849949,24842224,24836596,24832863,24829897,24818049	Gene ID= ENSG00000060982.14 TPM= 4.67 Transcript Type= NA
chr12	24810022	24949459	24810022	24949459	-	ENST00000261192.11@BCAT1	ENST00000261192.11	protein_coding	24948927,24901814,24894275,24881301,24878530,24849786,24842082,24836511,24832723,24829823,24810022	24949459,24901885,24894475,24881411,24878649,24849949,24842224,24836596,24832863,24829897,24818049	Gene ID= ENSG00000060982.14 TPM= 4.67 Transcript Type= protein_coding
chr12	24814803	24903300	24814803	24903300	-	transcript1519.chr12.nnic@BCAT1	transcript1519.chr12.nnic	protein_coding	24903110,24901814,24894275,24881301,24878530,24849786,24842082,24836511,24832723,24829823,24814803	24903300,24901885,24894475,24881411,24878649,24849949,24842224,24836596,24832863,24829897,24818049	Gene ID= ENSG00000060982.14 TPM= 2.72 Transcript Type= NA
chr12	24814803	24903437	24814803	24903437	-	transcript1520.chr12.nnic@BCAT1	transcript1520.chr12.nnic	protein_coding	24903336,24901814,24894275,24881301,24878530,24849786,24842082,24836511,24832723,24829823,24814803	24903437,24901885,24894475,24881411,24878649,24849949,24842224,24836596,24832863,24829897,24818049	Gene ID= ENSG00000060982.14 TPM= 2.72 Transcript Type= NA
chr12	24816573	24903042	24816573	24903042	-	transcript1529.chr12.nic@BCAT1	transcript1529.chr12.nic	protein_coding	24902947,24901814,24894275,24878530,24849786,24842082,24836511,24832723,24829823,24816573	24903042,24901885,24894475,24878649,24849949,24842224,24836596,24832863,24829897,24818049	Gene ID= ENSG00000060982.14 TPM= 3.5 Transcript Type= NA
chr12	24814803	24902296	24814803	24902296	-	ENST00000538118.5@BCAT1	ENST00000538118.5	protein_coding	24901963,24901814,24894275,24881301,24878530,24849786,24842082,24836511,24832723,24829823,24814803	24902296,24901885,24894475,24881411,24878649,24849949,24842224,24836596,24832863,24829897,24818049	Gene ID= ENSG00000060982.14 TPM= 6.22 Transcript Type= protein_coding
chr12	25108424	25195126	25108424	25195126	-	ENST00000545133.5@CASC1	ENST00000545133.5	protein_coding	25195076,25155311,25154319,25149628,25147001,25144365,25123211,25121753,25119145,25114656,25111772,25110127,25108424	25195126,25155412,25154456,25149774,25147104,25144677,25123286,25121913,25119301,25114870,25111939,25110240,25108823	Gene ID= ENSG00000118307.18 TPM= 1.17 Transcript Type= protein_coding
chr12	25195216	25205014	25195216	25205014	+	ENST00000381356.8@ETFRF1	ENST00000381356.8	protein_coding	25195216,25203920,25204091	25195337,25204007,25205014	Gene ID= ENSG00000205707.10 TPM= 12.84 Transcript Type= protein_coding
chr12	25195216	25205135	25195216	25205135	+	ENST00000557540.6@ETFRF1	ENST00000557540.6	protein_coding	25195216,25203920,25204091	25195341,25204007,25205135	Gene ID= ENSG00000205707.10 TPM= 4.67 Transcript Type= protein_coding
chr12	25195265	25205015	25195265	25205015	+	ENST00000556885.5@ETFRF1	ENST00000556885.5	protein_coding	25195265,25203920,25204091	25195337,25204007,25205015	Gene ID= ENSG00000205707.10 TPM= 5.84 Transcript Type= protein_coding
chr12	25204789	25250931	25204789	25250931	-	ENST00000311936.7@KRAS	ENST00000311936.7	protein_coding	25250751,25245274,25227234,25225614,25204789	25250931,25245395,25227412,25225773,25209911	Gene ID= ENSG00000133703.11 TPM= 3.5 Transcript Type= protein_coding
chr12	25247389	25249606	25247389	25249606	+	transcript1557.chr12.nnic@NA	transcript1557.chr12.nnic	NA	25247389	25249606	Gene ID= novel_gene_chr12_1558 TPM= 9.34 Transcript Type= NA
chr12	25385734	25386194	25385734	25386194	-	transcript1559.chr12.nnic@NA	transcript1559.chr12.nnic	NA	25385734	25386194	Gene ID= novel_gene_chr12_1560 TPM= 2.34 Transcript Type= NA
chr12	25958517	26072869	25958517	26072869	+	transcript1564.chr12.nic@RASSF8	transcript1564.chr12.nic	protein_coding	25958517,25995037,26055236,26064498,26067569,26068697	25959148,25995130,26055446,26065387,26067713,26072869	Gene ID= ENSG00000123094.15 TPM= 27.37 Transcript Type= NA
chr12	25958621	26072869	25958621	26072869	+	transcript1565.chr12.nic@RASSF8	transcript1565.chr12.nic	protein_coding	25958621,25995037,26055279,26064498,26067569,26068697	25959148,25995130,26055446,26065387,26067713,26072869	Gene ID= ENSG00000123094.15 TPM= 15.11 Transcript Type= NA
chr12	25958698	26072869	25958698	26072869	+	transcript1569.chr12.nnic@RASSF8	transcript1569.chr12.nnic	protein_coding	25958698,25995037,26064498,26067569,26068697	25959148,25995130,26065387,26067713,26072869	Gene ID= ENSG00000123094.15 TPM= 4.6 Transcript Type= NA
chr12	25958685	26072869	25958685	26072869	+	transcript1572.chr12.nic@RASSF8	transcript1572.chr12.nic	protein_coding	25958685,26055279,26064498,26067569,26068697	25959148,26055446,26065387,26067713,26072869	Gene ID= ENSG00000123094.15 TPM= 11.61 Transcript Type= NA
chr12	25959058	26072869	25959058	26072869	+	ENST00000405154.6@RASSF8	ENST00000405154.6	protein_coding	25959058,26055236,26064498,26067569,26068697	25959148,26055446,26065387,26067713,26072869	Gene ID= ENSG00000123094.15 TPM= 5.77 Transcript Type= protein_coding
chr12	26195340	26234779	26195340	26234779	+	ENST00000422622.3@SSPN	ENST00000422622.3	protein_coding	26195340,26224293,26230711	26195531,26224379,26234779	Gene ID= ENSG00000123096.11 TPM= 1.17 Transcript Type= protein_coding
chr12	26195496	26232955	26195496	26232955	+	ENST00000242729.6@SSPN	ENST00000242729.6	protein_coding	26195496,26224293,26230711	26195951,26224379,26232955	Gene ID= ENSG00000123096.11 TPM= 4.67 Transcript Type= protein_coding
chr12	26320677	26322569	26320677	26322569	+	transcript1602.chr12.nnic@NA	transcript1602.chr12.nnic	NA	26320677	26322569	Gene ID= novel_gene_chr12_1603 TPM= 2.34 Transcript Type= NA
chr12	26336515	26833198	26336515	26833198	-	ENST00000381340.7@ITPR2	ENST00000381340.7	protein_coding	26832690,26790157,26725650,26724656,26722397,26716144,26715752,26715299,26711173,26695606,26686481,26682574,26681874,26665910,26663685,26659113,26658011,26657707,26656297,26655708,26653976,26631866,26628033,26624299,26622240,26621123,26602617,26602370,26599987,26599145,26596883,26595465,26580027,26578713,26561762,26556233,26550247,26495152,26494153,26487068,26486104,26483698,26481131,26476912,26475296,26443543,26439127,26436221,26427913,26419049,26415303,26411320,26400128,26398876,26387434,26340167,26336515	26833198,26790227,26725765,26724742,26722555,26716242,26715835,26715445,26711268,26695650,26686632,26682673,26682034,26666051,26663846,26659285,26658130,26657892,26656548,26655852,26654126,26632059,26628162,26624356,26622405,26621296,26602706,26602495,26600109,26599345,26597134,26595590,26580155,26578833,26561952,26556375,26550355,26495260,26494340,26487251,26486360,26483898,26481241,26477007,26475418,26443650,26439319,26436346,26428088,26419213,26415498,26411412,26400258,26399041,26387594,26340328,26339483	Gene ID= ENSG00000123104.11 TPM= 2.34 Transcript Type= protein_coding
chr12	26905181	26938321	26905181	26938321	-	ENST00000261191.11@INTS13	ENST00000261191.11	protein_coding	26937796,26936579,26934556,26928703,26928205,26925761,26924355,26922616,26917644,26917352,26916002,26914408,26913974,26913457,26911178,26906302,26905181	26938321,26936814,26934630,26928905,26928285,26925851,26924483,26922700,26917733,26917441,26916180,26914578,26914128,26913687,26911317,26906437,26905536	Gene ID= ENSG00000064102.14 TPM= 25.1 Transcript Type= protein_coding
chr12	26905181	26937981	26905181	26937981	-	transcript1613.chr12.nic@INTS13	transcript1613.chr12.nic	protein_coding	26937796,26936579,26934556,26928703,26928205,26925761,26924355,26922616,26917644,26917352,26916002,26913974,26913457,26911178,26906302,26905181	26937981,26936814,26934630,26928905,26928285,26925851,26924483,26922700,26917733,26917441,26916180,26914128,26913687,26911317,26906437,26905536	Gene ID= ENSG00000064102.14 TPM= 5.25 Transcript Type= NA
chr12	26938383	26966553	26938383	26966553	+	ENST00000229395.7@FGFR1OP2	ENST00000229395.7	protein_coding	26938383,26954145,26956543,26957601,26960515,26963342,26964596	26938710,26954293,26956660,26957743,26960628,26963455,26966553	Gene ID= ENSG00000111790.13 TPM= 7.01 Transcript Type= protein_coding
chr12	26938472	26966650	26938472	26966650	+	transcript1660.chr12.nnic@FGFR1OP2	transcript1660.chr12.nnic	protein_coding	26938472,26956543,26957601,26963342,26964596	26938710,26956660,26957743,26963455,26966650	Gene ID= ENSG00000111790.13 TPM= 2.34 Transcript Type= NA
chr12	26938500	26966650	26938500	26966650	+	ENST00000327214.5@FGFR1OP2	ENST00000327214.5	protein_coding	26938500,26954145,26956543,26957601,26963342,26964596	26938710,26954293,26956660,26957743,26963455,26966650	Gene ID= ENSG00000111790.13 TPM= 25.69 Transcript Type= protein_coding
chr12	26973651	27014367	26973651	27014367	-	transcript1632.chr12.nic@TM7SF3	transcript1632.chr12.nic	protein_coding	27014078,26999526,26996742,26995237,26990450,26982773,26980566,26979784,26976260,26975496,26973651	27014367,26999676,26996862,26995408,26990627,26982859,26980646,26979936,26976357,26975658,26974227	Gene ID= ENSG00000064115.10 TPM= 7.01 Transcript Type= NA
chr12	26973195	27014394	26973195	27014394	-	ENST00000343028.8@TM7SF3	ENST00000343028.8	protein_coding	27014078,27003236,26999526,26996742,26995237,26990450,26982773,26980566,26979784,26976260,26975496,26973195	27014394,27003390,26999676,26996862,26995408,26990627,26982859,26980646,26979936,26976357,26975658,26974227	Gene ID= ENSG00000064115.10 TPM= 19.85 Transcript Type= protein_coding
chr12	27009569	27014396	27009569	27014396	-	transcript1664.chr12.nnic@NA	transcript1664.chr12.nnic	NA	27009569	27014396	Gene ID= novel_gene_chr12_1665 TPM= 4.67 Transcript Type= NA
chr12	27022550	27029749	27022550	27029749	+	ENST00000282892.3@MED21	ENST00000282892.3	protein_coding	27022550,27026420,27027347,27028285	27022621,27026534,27027447,27029749	Gene ID= ENSG00000152944.8 TPM= 32.69 Transcript Type= protein_coding
chr12	27034993	27038941	27034993	27038941	+	transcript1670.chr12.nnic@NA	transcript1670.chr12.nnic	NA	27034993	27038941	Gene ID= novel_gene_chr12_1671 TPM= 3.5 Transcript Type= NA
chr12	27244252	27325090	27244252	27325090	+	transcript1685.chr12.nic@STK38L	transcript1685.chr12.nic	protein_coding	27244252,27297710,27302137,27309114,27312549,27314504,27315015,27315289,27317336,27317896,27319328,27322143,27322328	27244332,27297854,27302188,27309197,27312672,27314658,27315117,27315350,27317453,27318019,27319423,27322234,27325090	Gene ID= ENSG00000211455.7 TPM= 2.34 Transcript Type= NA
chr12	27524131	27695564	27524131	27695564	+	transcript1695.chr12.nic@PPFIBP1	transcript1695.chr12.nic	protein_coding	27524131,27578152,27633362,27634910,27646062,27647729,27650010,27654722,27656616,27658816,27660884,27664362,27667166,27671431,27672427,27673767,27674192,27676428,27679489,27679933,27681546,27682387,27682615,27687385,27688298,27689015,27691749,27692591,27692796	27524365,27578239,27633460,27635115,27646148,27647842,27650141,27654814,27656730,27658848,27660945,27664446,27667320,27671546,27672483,27673827,27674221,27676599,27679639,27680061,27681696,27682498,27682703,27687507,27688423,27689203,27691928,27692656,27695564	Gene ID= ENSG00000110841.13 TPM= 20.23 Transcript Type= NA
chr12	27524131	27695564	27524131	27695564	+	transcript1699.chr12.nic@PPFIBP1	transcript1699.chr12.nic	protein_coding	27524131,27578152,27633362,27634910,27646062,27647729,27650010,27654722,27656616,27660884,27664362,27667166,27671431,27672427,27673767,27674192,27676428,27677064,27679489,27679933,27681546,27682387,27682615,27687385,27688298,27689015,27691749,27692591,27692796	27524365,27578239,27633460,27635115,27646148,27647842,27650141,27654814,27656730,27660945,27664446,27667320,27671546,27672483,27673827,27674221,27676599,27677096,27679639,27680061,27681696,27682498,27682703,27687507,27688423,27689203,27691928,27692656,27695564	Gene ID= ENSG00000110841.13 TPM= 17.9 Transcript Type= NA
chr12	27524158	27637319	27524158	27637319	+	ENST00000545334.5@PPFIBP1	ENST00000545334.5	protein_coding	27524158,27578152,27633362,27634910	27524365,27578239,27633460,27637319	Gene ID= ENSG00000110841.13 TPM= 1.17 Transcript Type= protein_coding
chr12	27524256	27695564	27524256	27695564	+	ENST00000228425.10@PPFIBP1	ENST00000228425.10	protein_coding	27524256,27578152,27633362,27634910,27646062,27647729,27650010,27654722,27656616,27658816,27660884,27664362,27667166,27671431,27672427,27673767,27674192,27676428,27677064,27679489,27679933,27681546,27682387,27682615,27687385,27688298,27689015,27691749,27692591,27692796	27524365,27578239,27633460,27635115,27646148,27647842,27650141,27654814,27656730,27658848,27660945,27664446,27667320,27671546,27672483,27673827,27674221,27676599,27677096,27679639,27680061,27681696,27682498,27682703,27687507,27688423,27689203,27691928,27692656,27695564	Gene ID= ENSG00000110841.13 TPM= 10.89 Transcript Type= protein_coding
chr12	27710773	27756295	27710773	27756295	+	ENST00000081029.7@MRPS35	ENST00000081029.7	protein_coding	27710773,27714780,27716291,27719808,27724047,27735447,27737539,27755181	27710955,27714820,27716458,27719868,27724186,27735556,27737608,27756295	Gene ID= ENSG00000061794.12 TPM= 99.25 Transcript Type= protein_coding
chr12	27710835	27756294	27710835	27756294	+	ENST00000538315.5@MRPS35	ENST00000538315.5	protein_coding	27710835,27714780,27716291,27719808,27724047,27737539,27755181	27710955,27714820,27716458,27719868,27724186,27737608,27756294	Gene ID= ENSG00000061794.12 TPM= 2.34 Transcript Type= protein_coding
chr12	28190450	28550165	28190450	28550165	+	transcript1730.chr12.nnic@CCDC91	transcript1730.chr12.nnic	protein_coding	28190450,28209470,28210963,28225795,28226140,28255581,28257202,28259364,28305649,28306742,28307645,28362438,28391304,28450161,28450350,28452478,28484052,28549063	28190641,28209573,28211034,28225861,28226199,28255662,28257245,28259442,28305806,28306945,28307749,28362515,28391411,28450253,28450418,28452654,28484165,28550165	Gene ID= ENSG00000123106.10 TPM= 2.72 Transcript Type= NA
chr12	28190428	28550165	28190428	28550165	+	transcript1736.chr12.nnic@CCDC91	transcript1736.chr12.nnic	protein_coding	28190428,28225795,28255581,28257202,28259364,28305649,28306742,28307645,28362438,28391304,28450161,28450350,28452478,28484052,28549063	28190641,28225861,28255662,28257245,28259442,28305806,28306945,28307749,28362515,28391411,28450253,28450418,28452654,28484165,28550165	Gene ID= ENSG00000123106.10 TPM= 5.06 Transcript Type= NA
chr12	28190426	28550165	28190426	28550165	+	transcript1741.chr12.nic@CCDC91	transcript1741.chr12.nic	protein_coding	28190426,28257202,28259364,28305649,28306742,28307645,28362438,28391304,28450161,28450350,28452478,28484052,28549063	28190641,28257245,28259442,28305806,28306945,28307749,28362515,28391411,28450253,28450418,28452654,28484165,28550165	Gene ID= ENSG00000123106.10 TPM= 15.56 Transcript Type= NA
chr12	28190438	28452636	28190438	28452636	+	ENST00000536442.5@CCDC91	ENST00000536442.5	protein_coding	28190438,28257202,28259364,28305649,28306742,28307645,28362438,28391304,28450161,28450350,28452478	28190641,28257245,28259442,28305806,28306945,28307749,28362515,28391411,28450253,28450418,28452636	Gene ID= ENSG00000123106.10 TPM= 1.17 Transcript Type= non_stop_decay
chr12	28188330	28190738	28188330	28190738	-	ENST00000617468.1@AC022364.1	ENST00000617468.1	antisense_RNA	28188330	28190738	Gene ID= ENSG00000247934.4 TPM= 3.5 Transcript Type= antisense_RNA
chr12	29149046	29341125	29149046	29341125	+	transcript1753.chr12.nic@FAR2	transcript1753.chr12.nic	protein_coding	29149046,29270412,29293300,29297021,29307658,29309186,29311028,29311883,29316841,29321795,29332600,29333632,29340808	29149407,29270638,29293475,29297200,29307835,29309230,29311146,29311950,29317012,29321924,29332727,29333734,29341125	Gene ID= ENSG00000064763.10 TPM= 2.34 Transcript Type= NA
chr12	29149200	29335616	29149200	29335616	+	ENST00000536681.7@FAR2	ENST00000536681.7	protein_coding	29149200,29270412,29293300,29297021,29307658,29309186,29311028,29311883,29316841,29321795,29332600,29333632	29149407,29270638,29293475,29297200,29307835,29309230,29311146,29311950,29317012,29321924,29332727,29335616	Gene ID= ENSG00000064763.10 TPM= 11.68 Transcript Type= protein_coding
chr12	29340716	29381206	29340716	29381206	-	transcript1756.chr12.nic@ERGIC2	transcript1756.chr12.nic	protein_coding	29381115,29371528,29370114,29368241,29366877,29361645,29357623,29350013,29349079,29345443,29343120,29341734,29340716	29381206,29371670,29370222,29368287,29366947,29361685,29357724,29350068,29349177,29345540,29343282,29341816,29341218	Gene ID= ENSG00000087502.17 TPM= 3.5 Transcript Type= NA
chr12	29337352	29381153	29337352	29381153	-	ENST00000360150.8@ERGIC2	ENST00000360150.8	protein_coding	29381115,29371528,29370114,29368241,29366877,29361645,29357623,29356382,29350013,29349079,29345443,29343120,29341734,29337352	29381153,29371670,29370222,29368287,29366947,29361685,29357724,29356477,29350068,29349177,29345540,29343282,29341816,29341218	Gene ID= ENSG00000087502.17 TPM= 3.5 Transcript Type= protein_coding
chr12	29778947	29783935	29778947	29783935	+	transcript1782.chr12.nnic@NA	transcript1782.chr12.nnic	NA	29778947	29783935	Gene ID= novel_gene_chr12_1783 TPM= 2.34 Transcript Type= NA
chr12	30628988	30695986	30628988	30695986	-	ENST00000256079.8@IPO8	ENST00000256079.8	protein_coding	30695564,30690496,30684301,30681659,30680482,30676498,30674659,30673990,30670962,30669183,30666175,30665729,30665220,30663489,30662327,30661141,30656684,30652967,30652192,30649137,30639515,30636982,30634083,30631895,30628988	30695986,30690577,30684457,30681817,30680638,30676587,30674753,30674074,30671096,30669282,30666251,30665845,30665309,30663654,30662487,30661266,30656750,30653092,30652289,30649232,30639735,30637187,30634286,30632011,30630957	Gene ID= ENSG00000133704.9 TPM= 25.69 Transcript Type= protein_coding
chr12	31073842	31104791	31073842	31104791	+	transcript1800.chr12.nic@DDX11	transcript1800.chr12.nic	protein_coding	31073842,31078390,31083813,31084583,31084969,31087938,31089044,31089403,31089886,31091719,31092846,31093245,31094590,31094755,31096341,31096637,31096859,31097885,31100635,31101027,31101833,31102243,31102427,31102936,31103317,31103577	31074091,31078537,31084061,31084669,31085126,31087983,31089151,31089490,31090094,31091871,31092892,31093324,31094634,31094822,31096379,31096745,31096990,31097997,31100707,31101130,31101982,31102311,31102527,31103020,31103395,31104791	Gene ID= ENSG00000013573.16 TPM= 2.34 Transcript Type= NA
chr12	31280584	31326203	31280584	31326203	-	transcript1804.chr12.nnic@FAM60A	transcript1804.chr12.nnic	protein_coding	31326024,31304982,31298077,31295234,31293805,31287634,31280584	31326203,31305123,31298224,31295333,31293931,31287784,31282871	Gene ID= ENSG00000139146.13 TPM= 6.22 Transcript Type= NA
chr12	31280584	31325896	31280584	31325896	-	transcript1807.chr12.nnic@FAM60A	transcript1807.chr12.nnic	protein_coding	31325836,31298077,31295234,31293805,31287634,31280584	31325896,31298224,31295333,31293931,31287784,31282871	Gene ID= ENSG00000139146.13 TPM= 3.89 Transcript Type= NA
chr12	31280584	31326372	31280584	31326372	-	ENST00000337682.8@FAM60A	ENST00000337682.8	protein_coding	31326024,31298077,31295234,31293805,31287634,31280584	31326372,31298224,31295333,31293931,31287784,31282871	Gene ID= ENSG00000139146.13 TPM= 33.08 Transcript Type= protein_coding
chr12	31451301	31591105	31451301	31591105	-	transcript1809.chr12.nic@DENND5B	transcript1809.chr12.nic	protein_coding	31590706,31495810,31479589,31460194,31451301	31591105,31495919,31480255,31460381,31452476	Gene ID= ENSG00000170456.15 TPM= 2.34 Transcript Type= NA
chr12	31671137	31729174	31671137	31729174	-	ENST00000281471.10@AMN1	ENST00000281471.10	protein_coding	31728971,31709293,31701863,31697740,31697361,31689007,31671137	31729174,31709425,31702007,31697957,31697417,31689118,31672377	Gene ID= ENSG00000151743.10 TPM= 4.67 Transcript Type= protein_coding
chr12	31959396	31993107	31959396	31993107	+	transcript1826.chr12.nic@KIAA1551	transcript1826.chr12.nic	protein_coding	31959396,31960777,31970189,31980878,31992378	31959491,31960871,31970356,31987322,31993107	Gene ID= ENSG00000174718.11 TPM= 5.25 Transcript Type= NA
chr12	31959421	31972625	31959421	31972625	+	transcript1834.chr12.nic@KIAA1551	transcript1834.chr12.nic	protein_coding	31959421,31960777,31970189	31959491,31960871,31972625	Gene ID= ENSG00000174718.11 TPM= 2.34 Transcript Type= NA
chr12	31959419	31993107	31959419	31993107	+	ENST00000312561.8@KIAA1551	ENST00000312561.8	protein_coding	31959419,31960777,31970189,31980878,31987239,31992378	31959491,31960871,31970356,31985957,31987322,31993107	Gene ID= ENSG00000174718.11 TPM= 26.27 Transcript Type= protein_coding
chr12	31959457	31962236	31959457	31962236	+	transcript1837.chr12.nnic@NA	transcript1837.chr12.nnic	NA	31959457	31962236	Gene ID= novel_gene_chr12_1838 TPM= 2.34 Transcript Type= NA
chr12	32106678	32338540	32106678	32338540	+	transcript1842.chr12.nic@BICD1	transcript1842.chr12.nic	protein_coding	32106678,32216247,32293994,32305697,32327461,32334516,32337499	32107544,32216459,32294146,32306122,32328555,32334667,32338540	Gene ID= ENSG00000151746.13 TPM= 3.5 Transcript Type= NA
chr12	32485972	32640739	32485972	32640739	+	ENST00000531134.5@FGD4	ENST00000531134.5	protein_coding	32485972,32564137,32576266,32581960,32598497,32601278,32602161,32607957,32610776,32611137,32619698,32624422,32624976,32625654,32633549,32638655,32640276	32486143,32564289,32576449,32582467,32598586,32601423,32602317,32608095,32610834,32611283,32619870,32624452,32625068,32625779,32633689,32638795,32640739	Gene ID= ENSG00000139132.14 TPM= 1.17 Transcript Type= protein_coding
chr12	32534291	32633662	32534291	32633662	+	transcript1855.chr12.nic@FGD4	transcript1855.chr12.nic	protein_coding	32534291,32564137,32576266,32581960,32598497,32601278,32602161,32607957,32610776,32611137,32619698,32624422,32624976,32625654,32633549	32534498,32564289,32576449,32582467,32598586,32601423,32602317,32608095,32610834,32611283,32619870,32624452,32625068,32625779,32633662	Gene ID= ENSG00000139132.14 TPM= 3.5 Transcript Type= NA
chr12	32679200	32745552	32679200	32745552	+	ENST00000452533.6@DNM1L	ENST00000452533.6	protein_coding	32679200,32701415,32707367,32708153,32710929,32713209,32718643,32720664,32722427,32731014,32731356,32731854,32733715,32737105,32738264,32740064,32740409,32742589,32743354	32679465,32701562,32707413,32708224,32711015,32713371,32718763,32720795,32722633,32731134,32731511,32731943,32733807,32737161,32738296,32740240,32740518,32742748,32745552	Gene ID= ENSG00000087470.17 TPM= 15.76 Transcript Type= protein_coding
chr12	32679215	32703632	32679215	32703632	+	transcript1870.chr12.nnic@DNM1L	transcript1870.chr12.nnic	protein_coding	32679215,32701415,32702234	32679465,32701719,32703632	Gene ID= ENSG00000087470.17 TPM= 4.09 Transcript Type= NA
chr12	32679320	32743581	32679320	32743581	+	ENST00000547312.5@DNM1L	ENST00000547312.5	protein_coding	32679320,32701415,32707367,32708153,32710929,32713209,32718643,32720664,32722427,32731014,32731356,32731854,32733715,32737105,32737865,32740064,32740409,32742589,32743354	32679465,32701562,32707413,32708224,32711015,32713371,32718763,32720795,32722633,32731134,32731511,32731943,32733807,32737161,32737942,32740240,32740518,32742748,32743581	Gene ID= ENSG00000087470.17 TPM= 4.67 Transcript Type= protein_coding
chr12	32679290	32743612	32679290	32743612	+	ENST00000549701.5@DNM1L	ENST00000549701.5	protein_coding	32679290,32701415,32707367,32708153,32710929,32713209,32718643,32720664,32722427,32731014,32731356,32731854,32733715,32737105,32737865,32738264,32740064,32740409,32742589,32743354	32679465,32701562,32707413,32708224,32711015,32713371,32718763,32720795,32722633,32731134,32731511,32731943,32733807,32737161,32737942,32738296,32740240,32740518,32742748,32743612	Gene ID= ENSG00000087470.17 TPM= 7.01 Transcript Type= protein_coding
chr12	32740530	32743136	32740530	32743136	-	transcript1871.chr12.nnic@NA	transcript1871.chr12.nnic	NA	32740530	32743136	Gene ID= novel_gene_chr12_1872 TPM= 2.34 Transcript Type= NA
chr12	32746544	32755902	32746544	32755902	-	ENST00000324868.12@YARS2	ENST00000324868.12	protein_coding	32755096,32753918,32750719,32749937,32746544	32755902,32754085,32750874,32750107,32747363	Gene ID= ENSG00000139131.12 TPM= 1.17 Transcript Type= protein_coding
chr12	38652185	38905631	38652185	38905631	-	ENST00000331366.9@CPNE8	ENST00000331366.9	protein_coding	38905437,38874471,38873004,38848559,38839916,38829379,38776238,38767635,38762112,38760847,38730283,38724846,38723772,38702875,38693657,38685490,38677452,38675717,38670729,38652185	38905631,38874511,38873050,38848662,38839955,38829455,38776301,38767738,38762216,38760888,38730358,38724899,38723833,38702921,38693838,38685617,38677554,38675774,38670802,38654070	Gene ID= ENSG00000139117.13 TPM= 5.84 Transcript Type= protein_coding
chr12	39293229	39443390	39293229	39443390	-	ENST00000361961.7@KIF21A	ENST00000361961.7	protein_coding	39442927,39370039,39369729,39367883,39367030,39366350,39363098,39358178,39357248,39356832,39351777,39342034,39341505,39340906,39340165,39337096,39333212,39332893,39332591,39332214,39331690,39330746,39330242,39326264,39325839,39322668,39319906,39318073,39315932,39315229,39311417,39309586,39307565,39304821,39302965,39301480,39293229	39443390,39370261,39369911,39368032,39367164,39366517,39363213,39358373,39357437,39356895,39351980,39342124,39341622,39341094,39340364,39337203,39333280,39333107,39332744,39332408,39331791,39330911,39330262,39326324,39325893,39322882,39320013,39318201,39315970,39315240,39311553,39309766,39307729,39304938,39303135,39301679,39294517	Gene ID= ENSG00000139116.18 TPM= 3.5 Transcript Type= protein_coding
chr12	39829408	40106084	39829408	40106084	-	transcript1887.chr12.nic@SLC2A13	transcript1887.chr12.nic	protein_coding	40105253,40048051,40028301,39951257,39871798,39864762,39829408	40106084,40048210,40028509,39951365,39871961,39864882,39830228	Gene ID= ENSG00000151229.12 TPM= 2.92 Transcript Type= NA
chr12	39949490	40106089	39949490	40106089	-	ENST00000380858.1@SLC2A13	ENST00000380858.1	protein_coding	40105253,40048051,40028301,39949490	40106089,40048210,40028509,39951365	Gene ID= ENSG00000151229.12 TPM= 1.75 Transcript Type= protein_coding
chr12	40156152	40160400	40156152	40160400	+	transcript1897.chr12.nnic@NA	transcript1897.chr12.nnic	NA	40156152	40160400	Gene ID= novel_gene_chr12_1898 TPM= 2.34 Transcript Type= NA
chr12	40223076	40224915	40223076	40224915	-	ENST00000618127.1@AC079630.1	ENST00000618127.1	antisense_RNA	40223076	40224915	Gene ID= ENSG00000225342.2 TPM= 21.02 Transcript Type= antisense_RNA
chr12	40224997	40294890	40224997	40294890	+	transcript1913.chr12.nic@LRRK2	transcript1913.chr12.nic	protein_coding	40224997,40225555,40232274,40235626,40237969,40240483,40243550,40249826,40251232,40251465,40252910,40257248,40259480,40263789,40274583,40274854,40277888,40278091,40283875,40287351,40293545,40294845	40225282,40225640,40232383,40235714,40238103,40240617,40243681,40249945,40251374,40251544,40253016,40257377,40259604,40263901,40274727,40274993,40278016,40278261,40284133,40287539,40293663,40294890	Gene ID= ENSG00000188906.14 TPM= 50.59 Transcript Type= NA
chr12	40224968	40264923	40224968	40264923	+	transcript1925.chr12.nic@LRRK2	transcript1925.chr12.nic	protein_coding	40224968,40225555,40232274,40235626,40237969,40240483,40243550,40249826,40251232,40251465,40252910,40257248,40259480,40263789	40225282,40225640,40232383,40235714,40238103,40240617,40243681,40249945,40251374,40251544,40253016,40257377,40259604,40264923	Gene ID= ENSG00000188906.14 TPM= 5.06 Transcript Type= NA
chr12	40224998	40229258	40224998	40229258	+	transcript1945.chr12.nic@LRRK2	transcript1945.chr12.nic	protein_coding	40224998,40225555	40225282,40229258	Gene ID= ENSG00000188906.14 TPM= 4.67 Transcript Type= NA
chr12	40221127	40224858	40221127	40224858	-	transcript1958.chr12.nnic@NA	transcript1958.chr12.nnic	NA	40221127	40224858	Gene ID= novel_gene_chr12_1959 TPM= 3.5 Transcript Type= NA
chr12	40342481	40343394	40342481	40343394	-	transcript1956.chr12.nnic@NA	transcript1956.chr12.nnic	NA	40342481	40343394	Gene ID= novel_gene_chr12_1957 TPM= 3.5 Transcript Type= NA
chr12	40359244	40360826	40359244	40360826	-	transcript1952.chr12.nnic@NA	transcript1952.chr12.nnic	NA	40359244	40360826	Gene ID= novel_gene_chr12_1953 TPM= 5.84 Transcript Type= NA
chr12	40908354	41072406	40908354	41072406	+	ENST00000347616.5@CNTN1	ENST00000347616.5	protein_coding	40908354,40910073,40918639,40922256,40924557,40929796,40933461,40933697,40936781,40937570,40939335,40943597,40943995,40959114,40980909,40993120,41014228,41016682,41020337,41025150,41027857,41029063,41069959	40908493,40910105,40918771,40922428,40924652,40930002,40933560,40933878,40936905,40937687,40939485,40943724,40944170,40959234,40981067,40993269,41014298,41016916,41020440,41025336,41027969,41029219,41072406	Gene ID= ENSG00000018236.14 TPM= 8.17 Transcript Type= protein_coding
chr12	42081845	42144879	42081845	42144879	-	ENST00000398675.7@GXYLT1	ENST00000398675.7	protein_coding	42144426,42129759,42119000,42109566,42105818,42097910,42097442,42081845	42144879,42129851,42119171,42109691,42106069,42098033,42097614,42087947	Gene ID= ENSG00000151233.10 TPM= 4.67 Transcript Type= protein_coding
chr12	42137995	42140195	42137995	42140195	+	transcript1976.chr12.nnic@NA	transcript1976.chr12.nnic	NA	42137995	42140195	Gene ID= novel_gene_chr12_1977 TPM= 2.34 Transcript Type= NA
chr12	42159124	42238248	42159124	42238248	-	ENST00000534854.6@YAF2	ENST00000534854.6	protein_coding	42238155,42237599,42161613,42159124	42238248,42237724,42161765,42160826	Gene ID= ENSG00000015153.14 TPM= 2.34 Transcript Type= protein_coding
chr12	42313901	42326130	42313901	42326130	-	transcript1984.chr12.nic@ZCRB1	transcript1984.chr12.nic	protein_coding	42325924,42324019,42322418,42317787,42317340,42313901	42326130,42324104,42322446,42317898,42317447,42313986	Gene ID= ENSG00000139168.7 TPM= 14.01 Transcript Type= NA
chr12	42312078	42326105	42312078	42326105	-	ENST00000266529.7@ZCRB1	ENST00000266529.7	protein_coding	42325924,42324019,42322418,42317787,42317340,42313874,42313690,42312078	42326105,42324104,42322446,42317898,42317447,42313986,42313765,42313198	Gene ID= ENSG00000139168.7 TPM= 1.17 Transcript Type= protein_coding
chr12	42326137	42441955	42326137	42441955	+	transcript1990.chr12.nic@PPHLN1	transcript1990.chr12.nic	protein_coding	42326137,42335883,42355161,42374863,42384940,42387456,42393570,42398854,42441315	42326229,42335974,42355222,42375074,42384996,42387535,42393689,42398994,42441955	Gene ID= ENSG00000134283.17 TPM= 5.84 Transcript Type= NA
chr12	42326157	42441955	42326157	42441955	+	ENST00000358314.11@PPHLN1	ENST00000358314.11	protein_coding	42326157,42335883,42351885,42355161,42374863,42384940,42387456,42393570,42398854,42441315	42326229,42335974,42352049,42355222,42375074,42384996,42387535,42393689,42398994,42441955	Gene ID= ENSG00000134283.17 TPM= 5.84 Transcript Type= protein_coding
chr12	42326145	42441950	42326145	42441950	+	ENST00000395580.7@PPHLN1	ENST00000395580.7	protein_coding	42326145,42332660,42335883,42351885,42355161,42374863,42384940,42387456,42393570,42398854,42441315	42326229,42332702,42335974,42352049,42355222,42375074,42384996,42387535,42393689,42398994,42441950	Gene ID= ENSG00000134283.17 TPM= 1.17 Transcript Type= protein_coding
chr12	42326178	42448618	42326178	42448618	+	ENST00000432191.6@PPHLN1	ENST00000432191.6	protein_coding	42326178,42335883,42355161,42374863,42384940,42387456,42393570,42398854,42441315,42442641,42445973,42446592	42326229,42335974,42355222,42375074,42384996,42387535,42393689,42398994,42441429,42442741,42446290,42448618	Gene ID= ENSG00000134283.17 TPM= 2.34 Transcript Type= protein_coding
chr12	42458951	42483993	42458951	42483993	-	ENST00000548696.6@PRICKLE1	ENST00000548696.6	protein_coding	42483758,42472385,42470246,42469450,42468626,42466194,42464395,42458951	42483993,42472561,42470359,42469587,42468829,42466380,42465258,42460665	Gene ID= ENSG00000139174.11 TPM= 3.5 Transcript Type= protein_coding
chr12	43718993	43758817	43718993	43758817	-	ENST00000344862.9@PUS7L	ENST00000344862.9	protein_coding	43758730,43754336,43748450,43746046,43742457,43738310,43736381,43731705,43718993	43758817,43755261,43748609,43746238,43742555,43738391,43736661,43731758,43730702	Gene ID= ENSG00000129317.14 TPM= 1.17 Transcript Type= protein_coding
chr12	43746214	43758767	43746214	43758767	-	ENST00000553166.1@PUS7L	ENST00000553166.1	protein_coding	43758730,43754336,43748450,43746214	43758767,43755261,43748609,43746238	Gene ID= ENSG00000129317.14 TPM= 1.17 Transcript Type= non_stop_decay
chr12	43758949	43788096	43758949	43788096	+	transcript2008.chr12.nic@IRAK4	transcript2008.chr12.nic	protein_coding	43758949,43760925,43768103,43772180,43772912,43773965,43777630,43778193,43782307,43783662,43786399,43786680	43759016,43760972,43768272,43772362,43773072,43774029,43777744,43778302,43782490,43783724,43786557,43788096	Gene ID= ENSG00000198001.13 TPM= 2.34 Transcript Type= NA
chr12	43793723	43806352	43793723	43806352	-	transcript2014.chr12.nic@TWF1	transcript2014.chr12.nic	protein_coding	43806221,43804495,43804176,43802286,43800435,43799398,43797708,43797302,43796976,43793723	43806352,43804572,43804240,43802464,43800530,43799502,43797833,43797452,43797097,43795755	Gene ID= ENSG00000151239.13 TPM= 3.74 Transcript Type= NA
chr12	43793723	43806607	43793723	43806607	-	transcript2017.chr12.nic@TWF1	transcript2017.chr12.nic	protein_coding	43806221,43805831,43804495,43802286,43800435,43799398,43797708,43797302,43796976,43793723	43806607,43806002,43804572,43802464,43800530,43799502,43797833,43797452,43797097,43795755	Gene ID= ENSG00000151239.13 TPM= 8.7 Transcript Type= NA
chr12	43793723	43806375	43793723	43806375	-	ENST00000395510.6@TWF1	ENST00000395510.6	protein_coding	43806221,43804495,43802286,43800435,43799398,43797708,43797302,43796976,43793723	43806375,43804572,43802464,43800530,43799502,43797833,43797452,43797097,43795755	Gene ID= ENSG00000151239.13 TPM= 121.96 Transcript Type= protein_coding
chr12	43793723	43806287	43793723	43806287	-	ENST00000552521.5@TWF1	ENST00000552521.5	protein_coding	43806221,43805831,43804495,43802286,43800435,43799398,43797708,43797302,43796976,43793723	43806287,43805885,43804572,43802464,43800530,43799502,43797833,43797452,43797097,43795755	Gene ID= ENSG00000151239.13 TPM= 1.69 Transcript Type= protein_coding
chr12	43836098	44389758	43836098	44389758	+	ENST00000266534.7@TMEM117	ENST00000266534.7	protein_coding	43836098,43844624,43944210,44143525,44211290,44299580,44376595,44388026	43836196,43844928,43944342,44143624,44211387,44299739,44376724,44389758	Gene ID= ENSG00000139173.9 TPM= 9.34 Transcript Type= protein_coding
chr12	44508278	44876374	44508278	44876374	-	ENST00000429094.6@NELL2	ENST00000429094.6	protein_coding	44875815,44875225,44815986,44779849,44779663,44777242,44777042,44776022,44774747,44714650,44711292,44703726,44665484,44610848,44607169,44532581,44523291,44522000,44520005,44508278	44876374,44875353,44816136,44780022,44779759,44777314,44777124,44776150,44774849,44714741,44711394,44703854,44665609,44610970,44607264,44532721,44523484,44522176,44520229,44508984	Gene ID= ENSG00000184613.10 TPM= 1.17 Transcript Type= protein_coding
chr12	44508282	44876355	44508282	44876355	-	ENST00000452445.6@NELL2	ENST00000452445.6	protein_coding	44876294,44875815,44875225,44815986,44779849,44779663,44777242,44777042,44776022,44774747,44714650,44711292,44703726,44665484,44610848,44607169,44532581,44523291,44522000,44520005,44508282	44876355,44875900,44875353,44816136,44780022,44779759,44777314,44777124,44776150,44774849,44714741,44711394,44703854,44665609,44610970,44607264,44532721,44523484,44522176,44520229,44508984	Gene ID= ENSG00000184613.10 TPM= 4.67 Transcript Type= protein_coding
chr12	45173064	45216006	45173064	45216006	-	ENST00000256692.5@PLEKHA8P1	ENST00000256692.5	transcribed_processed_pseudogene	45215940,45176241,45173064	45216006,45176433,45174642	Gene ID= ENSG00000134297.6 TPM= 1.17 Transcript Type= processed_transcript
chr12	45216120	45432351	45216120	45432351	+	ENST00000320560.12@ANO6	ENST00000320560.12	protein_coding	45216120,45302014,45331295,45347022,45348028,45348518,45350659,45357290,45367688,45378053,45388161,45390421,45401795,45403072,45403439,45409357,45416699,45421071,45422957,45429105	45216391,45302093,45331423,45347087,45348315,45348631,45350774,45357424,45367793,45378113,45388303,45390498,45402020,45403241,45403536,45409487,45416904,45421273,45423062,45432351	Gene ID= ENSG00000177119.15 TPM= 68.89 Transcript Type= protein_coding
chr12	45723873	45727574	45723873	45727574	-	transcript2041.chr12.nnic@NA	transcript2041.chr12.nnic	NA	45723873	45727574	Gene ID= novel_gene_chr12_2042 TPM= 5.84 Transcript Type= NA
chr12	45726025	45727783	45726025	45727783	-	transcript2039.chr12.nnic@NA	transcript2039.chr12.nnic	NA	45726025	45727783	Gene ID= novel_gene_chr12_2040 TPM= 9.34 Transcript Type= NA
chr12	45926716	45990594	45926716	45990594	-	transcript2058.chr12.nic@SCAF11	transcript2058.chr12.nic	protein_coding	45990353,45964107,45961700,45951650,45948437,45945249,45934447,45934176,45933131,45931506,45926716	45990594,45964188,45961857,45951727,45948537,45945313,45934505,45934285,45933232,45931612,45928859	Gene ID= ENSG00000139218.17 TPM= 6.22 Transcript Type= NA
chr12	45930446	45990574	45930446	45990574	-	transcript2061.chr12.nic@SCAF11	transcript2061.chr12.nic	protein_coding	45990353,45964107,45961700,45951650,45948437,45945249,45934447,45934176,45933131,45930446	45990574,45964188,45961857,45951727,45948537,45945313,45934505,45934285,45933232,45931612	Gene ID= ENSG00000139218.17 TPM= 2.34 Transcript Type= NA
chr12	45919131	45990565	45919131	45990565	-	ENST00000369367.7@SCAF11	ENST00000369367.7	protein_coding	45990353,45964107,45961700,45951650,45948437,45945249,45934447,45934176,45933131,45931506,45926142,45924728,45922936,45922463,45919131	45990565,45964188,45961857,45951727,45948537,45945313,45934505,45934285,45933232,45931612,45928859,45925074,45923154,45922582,45922194	Gene ID= ENSG00000139218.17 TPM= 16.73 Transcript Type= protein_coding
chr12	45954734	45990584	45954734	45990584	-	ENST00000395454.6@SCAF11	ENST00000395454.6	protein_coding	45990353,45964107,45961700,45954734	45990584,45964188,45961857,45956192	Gene ID= ENSG00000139218.17 TPM= 1.17 Transcript Type= protein_coding
chr12	45960455	45990580	45960455	45990580	-	ENST00000395453.2@SCAF11	ENST00000395453.2	protein_coding	45990353,45964107,45961700,45960455	45990580,45964188,45961857,45961322	Gene ID= ENSG00000139218.17 TPM= 2.34 Transcript Type= protein_coding
chr12	46183063	46269012	46183063	46269012	-	ENST00000398637.9@SLC38A1	ENST00000398637.9	protein_coding	46268526,46243200,46239679,46229564,46229153,46209054,46207529,46207155,46206080,46204532,46204301,46203010,46201098,46198625,46197919,46197720,46183063	46269012,46243314,46239893,46229639,46229268,46209127,46207621,46207236,46206162,46204590,46204417,46203089,46201198,46198743,46198060,46197817,46189071	Gene ID= ENSG00000111371.15 TPM= 39.7 Transcript Type= protein_coding
chr12	46226618	46268754	46226618	46268754	-	transcript2075.chr12.nic@SLC38A1	transcript2075.chr12.nic	protein_coding	46268526,46243200,46239679,46229564,46226618	46268754,46243314,46239893,46229639,46229268	Gene ID= ENSG00000111371.15 TPM= 2.34 Transcript Type= NA
chr12	46358189	46372867	46358189	46372867	-	ENST00000256689.9@SLC38A2	ENST00000256689.9	protein_coding	46372509,46371178,46370776,46370512,46367267,46367076,46366864,46365107,46364644,46364389,46363924,46363726,46363021,46362494,46362284,46358189	46372867,46371379,46370857,46370627,46367340,46367168,46366945,46365189,46364702,46364556,46364003,46363826,46363145,46362638,46362381,46361209	Gene ID= ENSG00000134294.13 TPM= 191.49 Transcript Type= protein_coding
chr12	46358481	46372771	46358481	46372771	-	ENST00000549258.5@SLC38A2	ENST00000549258.5	protein_coding	46372509,46371178,46370776,46367267,46367076,46366864,46365107,46364644,46364389,46363924,46363726,46363021,46362494,46362284,46358481	46372771,46371379,46370857,46367340,46367168,46366945,46365189,46364702,46364556,46364003,46363826,46363145,46362638,46362381,46361209	Gene ID= ENSG00000134294.13 TPM= 10.51 Transcript Type= nonsense_mediated_decay
chr12	46383659	46652577	46383659	46652577	+	transcript2084.chr12.nnic@AC008014.1	transcript2084.chr12.nnic	lincRNA	46383659,46387747,46470153,46652390	46383713,46387972,46470262,46652577	Gene ID= ENSG00000257261.5 TPM= 2.34 Transcript Type= NA
chr12	47076600	47079951	47076600	47079951	-	ENST00000429635.1@AMIGO2	ENST00000429635.1	protein_coding	47079462,47079147,47076600	47079951,47079248,47079065	Gene ID= ENSG00000139211.6 TPM= 4.67 Transcript Type= protein_coding
chr12	47205898	47216462	47205898	47216462	-	transcript2090.chr12.nic@PCED1B-AS1	transcript2090.chr12.nic	processed_transcript	47216384,47216165,47210640,47209281,47205898	47216462,47216264,47210761,47209458,47206588	Gene ID= ENSG00000247774.6 TPM= 4.67 Transcript Type= NA
chr12	47205898	47216408	47205898	47216408	-	ENST00000552269.5@PCED1B-AS1	ENST00000552269.5	processed_transcript	47216384,47216165,47210640,47209281,47205898	47216408,47216264,47210761,47209458,47206145	Gene ID= ENSG00000247774.6 TPM= 1.17 Transcript Type= lincRNA
chr12	47661249	47706061	47661249	47706061	-	ENST00000005386.7@RPAP3	ENST00000005386.7	protein_coding	47705952,47702688,47701464,47697597,47696276,47690518,47689125,47687876,47686780,47681696,47679704,47679493,47670107,47668916,47667754,47666980,47661249	47706061,47702846,47701604,47697719,47696403,47690639,47689195,47688001,47686907,47681817,47679774,47679594,47670345,47669102,47667851,47667080,47663590	Gene ID= ENSG00000005175.9 TPM= 7.01 Transcript Type= protein_coding
chr12	47734178	47736912	47734178	47736912	-	transcript2161.chr12.nnic@NA	transcript2161.chr12.nnic	NA	47734178	47736912	Gene ID= novel_gene_chr12_2162 TPM= 3.5 Transcript Type= NA
chr12	47737256	47758456	47737256	47758456	-	transcript2118.chr12.nic@RAPGEF3	transcript2118.chr12.nic	protein_coding	47757866,47751916,47751723,47751399,47751048,47750341,47749930,47749741,47749390,47748819,47748454,47748074,47747712,47747544,47746860,47743987,47743530,47741505,47740915,47740642,47740305,47740141,47739143,47738690,47738193,47738022,47737256	47758456,47751969,47751829,47751520,47751216,47750425,47749990,47749817,47749536,47748931,47748542,47748152,47747862,47747626,47746899,47744068,47743676,47741602,47741040,47740823,47740395,47740191,47739230,47738754,47738247,47738093,47737685	Gene ID= ENSG00000079337.15 TPM= 7.39 Transcript Type= NA
chr12	47737256	47758853	47737256	47758853	-	transcript2122.chr12.nic@RAPGEF3	transcript2122.chr12.nic	protein_coding	47758551,47757866,47751916,47751723,47751399,47751048,47750341,47749930,47749741,47749390,47748454,47748074,47747712,47747544,47746860,47743987,47743530,47741505,47740915,47740642,47740305,47740141,47739143,47738690,47738193,47738022,47737256	47758853,47758078,47751969,47751829,47751520,47751216,47750425,47749990,47749817,47749536,47748931,47748152,47747862,47747626,47746899,47744068,47743676,47741602,47741040,47740823,47740395,47740191,47739230,47738754,47738247,47738093,47737685	Gene ID= ENSG00000079337.15 TPM= 3.3 Transcript Type= NA
chr12	47737256	47758174	47737256	47758174	-	transcript2127.chr12.nnic@RAPGEF3	transcript2127.chr12.nnic	protein_coding	47757866,47751916,47751723,47751399,47751048,47750341,47749930,47749741,47749390,47748819,47748454,47748074,47747712,47747544,47743987,47743530,47741505,47740915,47740642,47740305,47740141,47739143,47738690,47738193,47738022,47737256	47758174,47751969,47751829,47751520,47751216,47750425,47749990,47749817,47749536,47748931,47748542,47748118,47747862,47747626,47746899,47743676,47741602,47741040,47740823,47740395,47740191,47739230,47738754,47738247,47738093,47737685	Gene ID= ENSG00000079337.15 TPM= 8.76 Transcript Type= NA
chr12	47737246	47771034	47737246	47771034	-	ENST00000549151.5@RAPGEF3	ENST00000549151.5	protein_coding	47770857,47757866,47751916,47751723,47751399,47751048,47750341,47749930,47749741,47749390,47748819,47748454,47748074,47747712,47747544,47746860,47743987,47743530,47741505,47740915,47740642,47740305,47740141,47739143,47738690,47738193,47738022,47737246	47771034,47758078,47751969,47751829,47751520,47751216,47750425,47749990,47749817,47749536,47748931,47748542,47748152,47747862,47747626,47746899,47744068,47743676,47741602,47741040,47740823,47740395,47740191,47739230,47738754,47738247,47738093,47737685	Gene ID= ENSG00000079337.15 TPM= 9.73 Transcript Type= protein_coding
chr12	47758361	47781670	47758361	47781670	+	transcript2150.chr12.nnic@SLC48A1	transcript2150.chr12.nnic	protein_coding	47758361,47759422,47760216,47772170,47773010,47779028,47780145	47759149,47759486,47760401,47772320,47773440,47779195,47781670	Gene ID= ENSG00000211584.13 TPM= 110.14 Transcript Type= NA
chr12	47758977	47781670	47758977	47781670	+	transcript2155.chr12.nic@SLC48A1	transcript2155.chr12.nic	protein_coding	47758977,47760216,47772170,47779028,47780145	47759149,47760401,47772320,47779195,47781670	Gene ID= ENSG00000211584.13 TPM= 54.68 Transcript Type= NA
chr12	47781149	47785997	47781149	47785997	+	transcript2159.chr12.nnic@NA	transcript2159.chr12.nnic	NA	47781149	47785997	Gene ID= novel_gene_chr12_2160 TPM= 9.63 Transcript Type= NA
chr12	47782722	47819866	47782722	47819866	-	ENST00000354334.7@HDAC7	ENST00000354334.7	protein_coding	47819767,47802224,47798785,47798562,47798108,47797384,47797017,47796207,47795587,47795184,47794760,47793369,47791871,47791586,47791259,47789813,47789523,47789261,47788045,47787712,47786585,47785752,47785387,47784079,47782722	47819866,47802274,47798972,47798652,47798219,47797499,47797142,47796298,47795767,47795380,47794933,47793588,47792004,47791706,47791308,47789920,47789578,47789348,47788164,47787809,47786703,47785885,47785471,47784217,47783886	Gene ID= ENSG00000061273.17 TPM= 89.61 Transcript Type= protein_coding
chr12	47782726	47798189	47782726	47798189	-	ENST00000470668.5@HDAC7	ENST00000470668.5	protein_coding	47798108,47797384,47797017,47796207,47795587,47795184,47794760,47793369,47791871,47791586,47791259,47789813,47789523,47789261,47788045,47787712,47786585,47785752,47785387,47784079,47782726	47798189,47797499,47797142,47796298,47795767,47795380,47794933,47793588,47792669,47791706,47791308,47789920,47789578,47789348,47788164,47787809,47786703,47785885,47785471,47784217,47783886	Gene ID= ENSG00000061273.17 TPM= 11.97 Transcript Type= retained_intron
chr12	47841537	47905022	47841537	47905022	-	ENST00000549336.5@VDR	ENST00000549336.5	protein_coding	47904955,47882694,47878968,47865047,47857504,47857129,47855630,47846657,47846335,47841537	47905022,47882774,47879115,47865177,47857688,47857249,47855801,47846808,47846451,47845005	Gene ID= ENSG00000111424.10 TPM= 10.51 Transcript Type= protein_coding
chr12	47842628	47905003	47842628	47905003	-	ENST00000550325.5@VDR	ENST00000550325.5	protein_coding	47904564,47882694,47878968,47865047,47857504,47857129,47855630,47846657,47846335,47842628	47905003,47882774,47879115,47865177,47857688,47857249,47855801,47846808,47846451,47845005	Gene ID= ENSG00000111424.10 TPM= 44.37 Transcript Type= protein_coding
chr12	47871328	47873124	47871328	47873124	-	transcript2169.chr12.nnic@NA	transcript2169.chr12.nnic	NA	47871328	47873124	Gene ID= novel_gene_chr12_2170 TPM= 2.34 Transcript Type= NA
chr12	47963570	47968878	47963570	47968878	+	transcript2178.chr12.nic@TMEM106C	transcript2178.chr12.nic	protein_coding	47963570,47964209,47965282,47966089,47966683,47967208,47968133	47963633,47964423,47965997,47966172,47966732,47967261,47968878	Gene ID= ENSG00000134291.11 TPM= 2.34 Transcript Type= NA
chr12	47963570	47968878	47963570	47968878	+	transcript2179.chr12.nic@TMEM106C	transcript2179.chr12.nic	protein_coding	47963570,47964209,47965282,47966683,47967208,47968133	47963633,47964423,47966172,47966732,47967261,47968878	Gene ID= ENSG00000134291.11 TPM= 2.34 Transcript Type= NA
chr12	47963570	47968878	47963570	47968878	+	transcript2181.chr12.nic@TMEM106C	transcript2181.chr12.nic	protein_coding	47963570,47964209,47966683,47968133	47963633,47966172,47967261,47968878	Gene ID= ENSG00000134291.11 TPM= 2.34 Transcript Type= NA
chr12	47963570	47968878	47963570	47968878	+	transcript2184.chr12.nic@TMEM106C	transcript2184.chr12.nic	protein_coding	47963570,47964209,47968133	47963633,47967261,47968878	Gene ID= ENSG00000134291.11 TPM= 2.34 Transcript Type= NA
chr12	47963620	47968878	47963620	47968878	+	ENST00000429772.6@TMEM106C	ENST00000429772.6	protein_coding	47963620,47964209,47965282,47965838,47966089,47966683,47967208,47968133	47963704,47964423,47965345,47965997,47966229,47966732,47967261,47968878	Gene ID= ENSG00000134291.11 TPM= 3.5 Transcript Type= protein_coding
chr12	47963635	47968849	47963635	47968849	+	ENST00000449758.6@TMEM106C	ENST00000449758.6	protein_coding	47963635,47964209,47965282,47965838,47966089,47966683,47967208,47968133	47963704,47964423,47965345,47965997,47966172,47966732,47967261,47968849	Gene ID= ENSG00000134291.11 TPM= 1.17 Transcript Type= protein_coding
chr12	48105923	48146104	48105923	48146104	+	ENST00000340802.10@PFKM	ENST00000340802.10	protein_coding	48105923,48107365,48108072,48122767,48130363,48131316,48132868,48133315,48134232,48134721,48134943,48135291,48137721,48139285,48139849,48140722,48141311,48141740,48141914,48142782,48143753,48144046,48145031,48145210,48145564	48106137,48107455,48108194,48122859,48130436,48131393,48133057,48133480,48134276,48134829,48135038,48135383,48137846,48139349,48139912,48140871,48141381,48141827,48142066,48142946,48143814,48144157,48145130,48145315,48146104	Gene ID= ENSG00000152556.15 TPM= 3.5 Transcript Type= protein_coding
chr12	48105192	48146104	48105192	48146104	+	transcript2191.chr12.nic@PFKM	transcript2191.chr12.nic	protein_coding	48105192,48122767,48130363,48131316,48132868,48133315,48134232,48134721,48134943,48135291,48137721,48139285,48139849,48140722,48141311,48141740,48141914,48142782,48143753,48144046,48145031,48145210,48145564	48105419,48122859,48130436,48131393,48133057,48133480,48134276,48134829,48135038,48135383,48137846,48139349,48139912,48140871,48141381,48141827,48142066,48142946,48143814,48144157,48145130,48145315,48146104	Gene ID= ENSG00000152556.15 TPM= 2.34 Transcript Type= NA
chr12	48119226	48146404	48119226	48146404	+	ENST00000359794.9@PFKM	ENST00000359794.9	protein_coding	48119226,48122767,48130363,48131316,48132868,48133315,48134232,48134721,48134943,48135291,48137721,48139285,48139849,48140722,48141311,48141740,48141914,48142782,48143753,48144046,48145031,48145210,48145564	48119406,48122859,48130436,48131393,48133057,48133480,48134276,48134829,48135038,48135383,48137846,48139349,48139912,48140871,48141381,48141827,48142066,48142946,48143814,48144157,48145130,48145315,48146404	Gene ID= ENSG00000152556.15 TPM= 38.53 Transcript Type= protein_coding
chr12	48119329	48146104	48119329	48146104	+	transcript2196.chr12.nic@PFKM	transcript2196.chr12.nic	protein_coding	48119329,48122767,48130363,48131316,48132868,48133315,48134232,48134721,48134943,48137721,48139285,48139849,48140722,48141311,48141740,48141914,48142782,48143753,48144046,48145031,48145210,48145564	48119406,48122859,48130436,48131393,48133057,48133480,48134276,48134829,48135038,48137846,48139349,48139912,48140871,48141381,48141827,48142066,48142946,48143814,48144157,48145130,48145315,48146104	Gene ID= ENSG00000152556.15 TPM= 7.01 Transcript Type= NA
chr12	48119343	48146104	48119343	48146104	+	ENST00000546964.5@PFKM	ENST00000546964.5	protein_coding	48119343,48122767,48130363,48131316,48132868,48133315,48134232,48134721,48134943,48137721,48139285,48139849,48140722,48141311,48141740,48141914,48142782,48143753,48144046,48145031,48145210,48145564	48119406,48122859,48130436,48131393,48133057,48133480,48134276,48134829,48135383,48137846,48139349,48139912,48140871,48141381,48141827,48142066,48142946,48143814,48144157,48145130,48145315,48146104	Gene ID= ENSG00000152556.15 TPM= 3.5 Transcript Type= retained_intron
chr12	48147788	48157595	48147788	48157595	-	ENST00000317697.7@ASB8	ENST00000317697.7	protein_coding	48157459,48153368,48151201,48147788	48157595,48153529,48151305,48149998	Gene ID= ENSG00000177981.10 TPM= 22.18 Transcript Type= protein_coding
chr12	48340008	48350891	48340008	48350891	-	ENST00000301042.7@ZNF641	ENST00000301042.7	protein_coding	48350786,48350046,48347907,48347252,48345345,48344599,48340008	48350891,48350218,48348115,48347343,48345474,48344712,48343727	Gene ID= ENSG00000167528.12 TPM= 1.17 Transcript Type= protein_coding
chr12	48340008	48350956	48340008	48350956	-	transcript2224.chr12.nnic@ZNF641	transcript2224.chr12.nnic	protein_coding	48350786,48347907,48347149,48345345,48344599,48340008	48350956,48348115,48347343,48345474,48344712,48343727	Gene ID= ENSG00000167528.12 TPM= 2.34 Transcript Type= NA
chr12	48340008	48350956	48340008	48350956	-	transcript2229.chr12.nic@ZNF641	transcript2229.chr12.nic	protein_coding	48350786,48347907,48347149,48344599,48340008	48350956,48348115,48347343,48344712,48343727	Gene ID= ENSG00000167528.12 TPM= 2.34 Transcript Type= NA
chr12	48653416	48682244	48653416	48682244	-	transcript2241.chr12.nic@KANSL2	transcript2241.chr12.nic	protein_coding	48682187,48681858,48681382,48679655,48679036,48671799,48669106,48667693,48660366,48654941,48653416	48682244,48682065,48681641,48679833,48679150,48671962,48669272,48667789,48660619,48655060,48654175	Gene ID= ENSG00000139620.12 TPM= 3.5 Transcript Type= NA
chr12	48653416	48682252	48653416	48682252	-	transcript2250.chr12.nic@KANSL2	transcript2250.chr12.nic	protein_coding	48682187,48681382,48679655,48671799,48669106,48667693,48660366,48654941,48653416	48682252,48681641,48679833,48671962,48669272,48667789,48660619,48655060,48654175	Gene ID= ENSG00000139620.12 TPM= 3.5 Transcript Type= NA
chr12	48653416	48682225	48653416	48682225	-	ENST00000420613.6@KANSL2	ENST00000420613.6	protein_coding	48682187,48681382,48679655,48679036,48671799,48669106,48667693,48660366,48654941,48653416	48682225,48681641,48679833,48679150,48671962,48669272,48667789,48660619,48655060,48654175	Gene ID= ENSG00000139620.12 TPM= 26.85 Transcript Type= protein_coding
chr12	48688464	48716898	48688464	48716898	-	ENST00000261900.7@CCNT1	ENST00000261900.7	protein_coding	48716515,48714443,48705768,48701013,48699778,48698138,48695999,48695759,48688464	48716898,48714524,48705896,48701073,48699840,48698183,48696162,48695829,48694436	Gene ID= ENSG00000129315.10 TPM= 5.84 Transcript Type= protein_coding
chr12	48766194	48789100	48766194	48789100	-	transcript2254.chr12.nic@ADCY6	transcript2254.chr12.nic	protein_coding	48788906,48782571,48778108,48777615,48777410,48777104,48776428,48776209,48775963,48775673,48775303,48774957,48774691,48774402,48773940,48773469,48772508,48772295,48771710,48770766,48768937,48766194	48789100,48783438,48778257,48777736,48777521,48777231,48776586,48776350,48776091,48775698,48775450,48775054,48774778,48774518,48774098,48773647,48772543,48772424,48771973,48770970,48769061,48768716	Gene ID= ENSG00000174233.11 TPM= 65.97 Transcript Type= NA
chr12	48766194	48789047	48766194	48789047	-	transcript2257.chr12.nic@ADCY6	transcript2257.chr12.nic	protein_coding	48788906,48782571,48778108,48777615,48777410,48777104,48776428,48776209,48775963,48775673,48775303,48774957,48774691,48774402,48773940,48773469,48772508,48772295,48771710,48770766,48766194	48789047,48783438,48778257,48777736,48777521,48777231,48776586,48776350,48776091,48775698,48775450,48775054,48774778,48774518,48774098,48773647,48772543,48772424,48771973,48770970,48769061	Gene ID= ENSG00000174233.11 TPM= 13.43 Transcript Type= NA
chr12	48818909	48828941	48818909	48828941	+	ENST00000551544.5@CACNB3	ENST00000551544.5	protein_coding	48818909,48819636,48823344,48823681,48824258,48824669,48824949,48825163,48825434,48825660,48826367,48826759,48826974,48827585	48818974,48819942,48823466,48823803,48824373,48824733,48824968,48825243,48825492,48825769,48826518,48826854,48827123,48828941	Gene ID= ENSG00000167535.7 TPM= 8.17 Transcript Type= nonsense_mediated_decay
chr12	48818731	48828941	48818731	48828941	+	ENST00000301050.6@CACNB3	ENST00000301050.6	protein_coding	48818731,48823344,48823681,48824258,48824669,48824949,48825163,48825434,48825660,48826367,48826759,48826974,48827585	48818974,48823466,48823803,48824373,48824733,48824968,48825243,48825492,48825769,48826518,48826854,48827123,48828941	Gene ID= ENSG00000167535.7 TPM= 14.01 Transcript Type= protein_coding
chr12	48829764	48852174	48829764	48852174	-	transcript2276.chr12.nic@DDX23	transcript2276.chr12.nic	protein_coding	48852084,48845574,48843940,48840013,48839844,48837524,48837281,48836894,48836569,48836121,48834320,48833277,48832422,48832078,48831142,48829764	48852174,48845782,48844050,48840106,48839909,48838080,48837393,48837037,48836794,48836266,48834497,48833519,48832573,48832186,48831316,48830692	Gene ID= ENSG00000174243.9 TPM= 2.34 Transcript Type= NA
chr12	48829764	48852163	48829764	48852163	-	ENST00000308025.7@DDX23	ENST00000308025.7	protein_coding	48852084,48845574,48843940,48840013,48839844,48837942,48837524,48837281,48836894,48836569,48836121,48834320,48833277,48832422,48832078,48831142,48829764	48852163,48845782,48844050,48840106,48839909,48838080,48837657,48837393,48837037,48836794,48836266,48834497,48833519,48832573,48832186,48831316,48830692	Gene ID= ENSG00000174243.9 TPM= 57.21 Transcript Type= protein_coding
chr12	48857145	48865898	48857145	48865898	-	ENST00000309739.5@RND1	ENST00000309739.5	protein_coding	48865648,48864783,48862009,48860997,48857145	48865898,48864870,48862118,48861131,48858241	Gene ID= ENSG00000172602.9 TPM= 11.68 Transcript Type= protein_coding
chr12	48921959	48925827	48921959	48925827	-	ENST00000550765.5@FKBP11	ENST00000550765.5	protein_coding	48925300,48925046,48924561,48924223,48923782,48921959	48925827,48925111,48924648,48924256,48923852,48922201	Gene ID= ENSG00000134285.10 TPM= 11.68 Transcript Type= protein_coding
chr12	48935723	48957551	48935723	48957551	-	ENST00000256682.8@ARF3	ENST00000256682.8	protein_coding	48957310,48940948,48939997,48939655,48935723	48957551,48941188,48940107,48939779,48939108	Gene ID= ENSG00000134287.9 TPM= 65.39 Transcript Type= protein_coding
chr12	49002281	49019197	49002281	49019197	-	ENST00000548065.5@PRKAG1	ENST00000548065.5	protein_coding	49018732,49013062,49005743,49005462,49005306,49005120,49004964,49004507,49003757,49003558,49003144,49002281	49019197,49013110,49005852,49005543,49005364,49005165,49005018,49004633,49003922,49003595,49003290,49003006	Gene ID= ENSG00000181929.11 TPM= 31.53 Transcript Type= protein_coding
chr12	49018975	49055324	49018975	49055324	-	ENST00000301067.11@KMT2D	ENST00000301067.11	protein_coding	49055276,49054900,49054528,49054307,49053978,49053476,49053207,49052915,49052564,49050886,49049682,49049105,49048659,49047965,49046609,49046260,49046065,49045920,49044744,49044403,49044200,49043868,49043635,49043363,49043076,49042741,49042561,49042089,49041917,49041655,49039724,49039435,49039222,49037125,49034812,49034582,49034410,49034067,49031175,49030893,49030601,49030280,49029401,49029061,49028828,49028009,49027803,49026182,49024810,49024578,49022590,49022280,49022043,49018975	49055324,49055026,49054751,49054416,49054140,49053641,49053321,49053072,49052709,49052424,49050790,49049218,49048769,49048069,49046790,49046424,49046174,49045967,49044965,49044522,49044304,49043998,49043782,49043428,49043186,49042878,49042645,49042330,49041990,49041705,49041535,49039617,49039358,49038989,49034935,49034666,49034476,49034299,49033964,49031033,49030768,49030439,49029476,49029236,49028958,49028141,49027930,49027322,49024946,49024708,49022875,49022353,49022151,49021872	Gene ID= ENSG00000167548.14 TPM= 38.53 Transcript Type= protein_coding
chr12	49036479	49041329	49036479	49041329	-	transcript2309.chr12.nic@KMT2D	transcript2309.chr12.nic	protein_coding	49039724,49039435,49039222,49036479	49041329,49039617,49039358,49038989	Gene ID= ENSG00000167548.14 TPM= 7.01 Transcript Type= NA
chr12	49064685	49070025	49064685	49070025	-	ENST00000301068.10@RHEBL1	ENST00000301068.10	protein_coding	49069734,49069035,49066968,49066619,49066476,49066231,49065350,49064685	49070025,49069106,49067035,49066701,49066532,49066278,49065431,49065192	Gene ID= ENSG00000167550.10 TPM= 1.17 Transcript Type= protein_coding
chr12	49089421	49094819	49089421	49094819	-	ENST00000266991.2@DHH	ENST00000266991.2	protein_coding	49094210,49091128,49089421	49094819,49091389,49090484	Gene ID= ENSG00000139549.2 TPM= 1.17 Transcript Type= protein_coding
chr12	49096551	49110898	49096551	49110898	-	ENST00000267102.12@LMBR1L	ENST00000267102.12	protein_coding	49110484,49106961,49105924,49104746,49104448,49103687,49103091,49102887,49102468,49102293,49102120,49101472,49101250,49100556,49100388,49097944,49096551	49110898,49107045,49105957,49104885,49104551,49103813,49103159,49102951,49102540,49102376,49102196,49101549,49101323,49100646,49100454,49098105,49097739	Gene ID= ENSG00000139636.15 TPM= 17.51 Transcript Type= protein_coding
chr12	49127782	49131395	49127782	49131395	-	ENST00000336023.9@TUBA1B	ENST00000336023.9	protein_coding	49131298,49129500,49129242,49127782	49131395,49129722,49129390,49128938	Gene ID= ENSG00000123416.15 TPM= 432.01 Transcript Type= protein_coding
chr12	49127782	49272662	49127782	49272662	-	transcript2348.chr12.nnic@AC010173.1	transcript2348.chr12.nnic	antisense_RNA	49272459,49127782	49272662,49128011	Gene ID= ENSG00000258101.2 TPM= 10.51 Transcript Type= NA
chr12	49184795	49272694	49184795	49272694	-	transcript2352.chr12.nnic@AC010173.1	transcript2352.chr12.nnic	antisense_RNA	49272631,49184795	49272694,49185671	Gene ID= ENSG00000258101.2 TPM= 5.84 Transcript Type= NA
chr12	49264907	49274603	49264907	49274603	+	ENST00000301072.10@TUBA1C	ENST00000301072.10	protein_coding	49264907,49269465,49269828,49272253	49265184,49269687,49269976,49274603	Gene ID= ENSG00000167553.15 TPM= 30.36 Transcript Type= protein_coding
chr12	49128532	49273334	49128532	49273334	+	transcript2347.chr12.nnic@TUBA1C	transcript2347.chr12.nnic	protein_coding	49128532,49272406	49128732,49273334	Gene ID= ENSG00000167553.15 TPM= 14.01 Transcript Type= NA
chr12	49184796	49189324	49184796	49189324	-	ENST00000301071.11@TUBA1A	ENST00000301071.11	protein_coding	49188977,49186611,49186310,49184796	49189324,49186833,49186458,49185990	Gene ID= ENSG00000167552.13 TPM= 256.87 Transcript Type= protein_coding
chr12	49323279	49331731	49323279	49331731	+	ENST00000257909.7@TROAP	ENST00000257909.7	protein_coding	49323279,49323604,49323845,49325501,49325747,49326076,49326668,49327209,49328927,49329161,49329395,49329857,49330145,49331214,49331573	49323349,49323752,49324037,49325658,49325884,49326158,49326720,49327330,49329055,49329244,49329454,49329991,49330943,49331407,49331731	Gene ID= ENSG00000135451.12 TPM= 1.17 Transcript Type= protein_coding
chr12	49346917	49353684	49346917	49353684	+	ENST00000549441.6@DNAJC22	ENST00000549441.6	protein_coding	49346917,49347644,49348766,49351317	49347551,49348105,49349712,49353684	Gene ID= ENSG00000178401.14 TPM= 2.34 Transcript Type= protein_coding
chr12	49367448	49527419	49367448	49527419	+	transcript2367.chr12.nic@SPATS2	transcript2367.chr12.nic	protein_coding	49367448,49406473,49460770,49484590,49489465,49490682,49494741,49496833,49500070,49514555,49519073,49522751,49524682,49525944	49367587,49406565,49461037,49484669,49489573,49490731,49495002,49497009,49500205,49514613,49519182,49522853,49524896,49527419	Gene ID= ENSG00000123352.17 TPM= 2.92 Transcript Type= NA
chr12	49367475	49527419	49367475	49527419	+	ENST00000321898.10@SPATS2	ENST00000321898.10	protein_coding	49367475,49460770,49484590,49489465,49490682,49494741,49496833,49500070,49514555,49519073,49522751,49524682,49525944	49367587,49461037,49484669,49489573,49490731,49495002,49497009,49500205,49514613,49519182,49522853,49524896,49527419	Gene ID= ENSG00000123352.17 TPM= 13.43 Transcript Type= protein_coding
chr12	49367462	49491159	49367462	49491159	+	ENST00000549375.5@SPATS2	ENST00000549375.5	protein_coding	49367462,49460770,49484590,49489465,49490682	49367587,49461037,49484669,49489573,49491159	Gene ID= ENSG00000123352.17 TPM= 1.17 Transcript Type= retained_intron
chr12	49539157	49558308	49539157	49558308	+	ENST00000257981.6@KCNH3	ENST00000257981.6	protein_coding	49539157,49540899,49541630,49542706,49543275,49543915,49544175,49548895,49549441,49550080,49554337,49555620,49556370,49557183,49557354	49539492,49541132,49541764,49542839,49543518,49544072,49544382,49549173,49549640,49550329,49554554,49555951,49556476,49557259,49558308	Gene ID= ENSG00000135519.6 TPM= 1.17 Transcript Type= protein_coding
chr12	49558302	49568130	49558302	49568130	-	transcript2389.chr12.nic@MCRS1	transcript2389.chr12.nic	protein_coding	49568048,49566077,49565529,49564737,49564481,49563438,49563001,49560295,49559939,49559729,49559453,49559214,49558843,49558302	49568130,49566215,49565667,49564895,49564590,49563546,49563139,49560370,49559967,49559821,49559535,49559301,49558970,49558729	Gene ID= ENSG00000187778.13 TPM= 19.65 Transcript Type= NA
chr12	49558302	49568144	49558302	49568144	-	transcript2390.chr12.nic@MCRS1	transcript2390.chr12.nic	protein_coding	49568048,49566077,49565529,49564737,49564481,49563438,49563001,49560295,49559939,49559729,49559453,49559214,49558843,49558302	49568144,49566841,49565667,49564895,49564590,49563546,49563139,49560370,49559967,49559821,49559535,49559301,49558970,49558729	Gene ID= ENSG00000187778.13 TPM= 21.99 Transcript Type= NA
chr12	49558302	49568144	49558302	49568144	-	transcript2391.chr12.nic@MCRS1	transcript2391.chr12.nic	protein_coding	49568048,49566722,49566077,49565529,49564737,49564481,49563438,49563001,49560295,49559939,49559729,49559453,49559214,49558302	49568144,49566841,49566215,49565667,49564895,49564590,49563546,49563139,49560370,49559967,49559821,49559535,49559301,49558970	Gene ID= ENSG00000187778.13 TPM= 3.89 Transcript Type= NA
chr12	49558320	49568153	49558320	49568153	-	ENST00000343810.8@MCRS1	ENST00000343810.8	protein_coding	49568048,49566722,49566077,49565529,49564737,49564481,49563438,49563001,49560295,49559939,49559729,49559453,49559214,49558843,49558320	49568153,49566841,49566215,49565667,49564895,49564590,49563546,49563139,49560370,49559967,49559821,49559535,49559301,49558970,49558729	Gene ID= ENSG00000187778.13 TPM= 33.86 Transcript Type= protein_coding
chr12	49623538	49644665	49623538	49644665	+	transcript2406.chr12.nic@PRPF40B	transcript2406.chr12.nic	protein_coding	49623538,49631401,49631860,49632596,49632855,49633014,49633427,49633637,49633886,49634332,49634538,49635099,49635365,49635843,49636716,49637470,49637733,49641908,49642235,49642580,49642930,49643223,49643691,49643861,49644100	49623593,49631544,49631925,49632623,49632880,49633124,49633547,49633661,49634092,49634455,49634602,49635263,49635473,49635993,49636849,49637584,49637824,49642024,49642372,49642675,49643016,49643397,49643752,49644004,49644665	Gene ID= ENSG00000110844.13 TPM= 9.34 Transcript Type= NA
chr12	49644931	49707563	49644931	49707563	-	transcript2396.chr12.nic@FMNL3	transcript2396.chr12.nic	protein_coding	49707055,49668471,49666127,49665832,49661966,49658442,49657082,49656823,49656404,49654910,49654192,49653725,49653226,49651933,49651382,49651168,49650676,49649691,49649470,49649259,49649029,49648193,49647703,49647276,49646886,49646639,49644931	49707563,49668554,49666207,49665908,49662049,49658594,49657190,49656899,49656497,49654984,49654302,49653874,49653327,49652212,49651450,49651292,49650878,49649925,49649538,49649339,49649158,49648353,49647804,49647368,49647009,49646753,49645903	Gene ID= ENSG00000161791.13 TPM= 31.06 Transcript Type= NA
chr12	49644931	49707457	49644931	49707457	-	transcript2400.chr12.nic@FMNL3	transcript2400.chr12.nic	protein_coding	49707055,49668471,49666127,49665832,49661966,49657082,49656823,49656404,49654910,49654192,49653725,49653226,49651933,49651382,49651168,49650676,49649691,49649470,49649259,49649029,49648193,49647703,49647276,49646886,49646639,49644931	49707457,49668554,49666207,49665908,49662049,49657190,49656899,49656497,49654984,49654302,49653874,49653327,49652212,49651450,49651292,49650878,49649925,49649538,49649339,49649158,49648353,49647804,49647368,49647009,49646753,49645903	Gene ID= ENSG00000161791.13 TPM= 8.87 Transcript Type= NA
chr12	49644953	49707393	49644953	49707393	-	ENST00000352151.9@FMNL3	ENST00000352151.9	protein_coding	49707055,49668471,49666127,49665832,49661966,49657082,49656823,49656404,49654910,49654192,49653725,49653226,49651933,49651382,49651168,49650676,49649691,49649470,49649259,49649029,49648193,49647703,49647276,49646886,49644953	49707393,49668554,49666207,49665908,49662049,49657190,49656899,49656497,49654984,49654302,49653874,49653327,49652212,49651450,49651292,49650878,49649925,49649538,49649339,49649158,49648353,49647804,49647368,49647009,49645903	Gene ID= ENSG00000161791.13 TPM= 13.54 Transcript Type= protein_coding
chr12	49639467	49645127	49639467	49645127	+	transcript2417.chr12.nnic@NA	transcript2417.chr12.nnic	NA	49639467	49645127	Gene ID= novel_gene_chr12_2418 TPM= 301.94 Transcript Type= NA
chr12	49741557	49764933	49741557	49764933	+	ENST00000267115.9@TMBIM6	ENST00000267115.9	protein_coding	49741557,49752464,49752973,49755635,49758227,49758383,49758683,49759221,49761704,49762873	49741611,49752549,49753081,49755755,49758275,49758480,49758762,49759321,49761779,49764933	Gene ID= ENSG00000139644.12 TPM= 298.71 Transcript Type= protein_coding
chr12	49741620	49764934	49741620	49764934	+	transcript2433.chr12.nic@TMBIM6	transcript2433.chr12.nic	protein_coding	49741620,49752464,49752973,49755635,49758227,49758383,49758683,49759221,49761704,49762873	49742115,49752549,49753081,49755755,49758275,49758480,49758762,49759321,49761779,49764934	Gene ID= ENSG00000139644.12 TPM= 81.53 Transcript Type= NA
chr12	49791146	49828425	49791146	49828425	-	ENST00000335999.6@NCKAP5L	ENST00000335999.6	protein_coding	49828322,49805980,49803922,49803097,49802958,49801848,49798350,49794765,49793734,49793352,49792678,49792446,49791146	49828425,49806041,49804080,49803165,49802996,49801967,49798463,49797394,49793896,49793433,49792986,49792588,49792051	Gene ID= ENSG00000167566.16 TPM= 25.69 Transcript Type= protein_coding
chr12	49836039	49843129	49836039	49843129	-	ENST00000333924.5@BCDIN3D	ENST00000333924.5	protein_coding	49842854,49836039	49843129,49839015	Gene ID= ENSG00000186666.5 TPM= 1.17 Transcript Type= protein_coding
chr12	49961870	49965681	49961870	49965681	+	ENST00000293599.6@AQP5	ENST00000293599.6	protein_coding	49961870,49963492,49964092,49964992	49962380,49963656,49964175,49965681	Gene ID= ENSG00000161798.6 TPM= 21.02 Transcript Type= protein_coding
chr12	50084972	50100712	50084972	50100712	+	ENST00000394963.8@SMARCD1	ENST00000394963.8	protein_coding	50084972,50086161,50086621,50086756,50087363,50088521,50089884,50090241,50090493,50094437,50096850,50098714,50098947	50085546,50086348,50086663,50086878,50087485,50088637,50089985,50090402,50090590,50094572,50096972,50098815,50100712	Gene ID= ENSG00000066117.14 TPM= 9.34 Transcript Type= protein_coding
chr12	50103819	50111319	50103819	50111319	+	ENST00000301149.7@GPD1	ENST00000301149.7	protein_coding	50103819,50104574,50105548,50106288,50106805,50107567,50108024,50109423	50104091,50104751,50105688,50106426,50106917,50107800,50108130,50111319	Gene ID= ENSG00000167588.12 TPM= 95.74 Transcript Type= protein_coding
chr12	50111979	50120451	50111979	50120451	+	ENST00000550487.5@COX14	ENST00000550487.5	protein_coding	50111979,50120036	50112301,50120451	Gene ID= ENSG00000178449.8 TPM= 24.52 Transcript Type= protein_coding
chr12	50116095	50118075	50116095	50118075	-	transcript2472.chr12.nnic@NA	transcript2472.chr12.nnic	NA	50116095	50118075	Gene ID= novel_gene_chr12_2473 TPM= 2.34 Transcript Type= NA
chr12	50129798	50167396	50129798	50167396	-	transcript2453.chr12.nnic@CERS5	transcript2453.chr12.nnic	protein_coding	50167101,50143952,50143074,50142053,50138567,50137728,50135941,50135732,50134546,50133933,50129798	50167396,50144057,50143204,50142110,50138617,50137820,50136069,50135838,50134702,50134068,50130694	Gene ID= ENSG00000139624.12 TPM= 14.01 Transcript Type= NA
chr12	50129798	50167382	50129798	50167382	-	transcript2454.chr12.nnic@CERS5	transcript2454.chr12.nnic	protein_coding	50167101,50144203,50143952,50143074,50142053,50138567,50137728,50135941,50135732,50134546,50129798	50167382,50144364,50144057,50143204,50142110,50138617,50137820,50136069,50135838,50134702,50130694	Gene ID= ENSG00000139624.12 TPM= 2.34 Transcript Type= NA
chr12	50129306	50167533	50129306	50167533	-	ENST00000422340.6@CERS5	ENST00000422340.6	protein_coding	50167101,50144769,50143952,50143074,50142053,50138567,50137728,50135941,50135732,50134546,50129306	50167533,50144969,50144057,50143204,50142110,50138617,50137820,50136069,50135838,50134702,50130694	Gene ID= ENSG00000139624.12 TPM= 1.17 Transcript Type= protein_coding
chr12	50129798	50167422	50129798	50167422	-	ENST00000317551.10@CERS5	ENST00000317551.10	protein_coding	50167101,50143952,50143074,50142053,50138567,50137728,50135941,50135732,50134546,50129798	50167422,50144057,50143204,50142110,50138617,50137820,50136069,50135838,50134702,50130694	Gene ID= ENSG00000139624.12 TPM= 36.2 Transcript Type= protein_coding
chr12	50175790	50222705	50175790	50222705	-	ENST00000552783.5@LIMA1	ENST00000552783.5	protein_coding	50222021,50205984,50204552,50200777,50195830,50192452,50181904,50175790	50222705,50206068,50204700,50200884,50195887,50192564,50182037,50178069	Gene ID= ENSG00000050405.13 TPM= 23.35 Transcript Type= protein_coding
chr12	50400809	50479996	50400809	50479996	+	ENST00000293618.12@LARP4	ENST00000293618.12	protein_coding	50400809,50427762,50428935,50430495,50435488,50437735,50440439,50441590,50453460,50454314,50462582,50466959,50473415,50473999,50475526	50401028,50427909,50429090,50430570,50435624,50437838,50440549,50441643,50453672,50454417,50462630,50467120,50473536,50474167,50479996	Gene ID= ENSG00000161813.21 TPM= 28.02 Transcript Type= protein_coding
chr12	50400929	50476463	50400929	50476463	+	ENST00000518444.5@LARP4	ENST00000518444.5	protein_coding	50400929,50427765,50428935,50430495,50435488,50437735,50440439,50441590,50453460,50454314,50461135,50462582,50466959,50473415,50473999,50475526	50401028,50427909,50429090,50430570,50435624,50437838,50440549,50441643,50453672,50454417,50461347,50462630,50467120,50473536,50474167,50476463	Gene ID= ENSG00000161813.21 TPM= 1.17 Transcript Type= protein_coding
chr12	50400908	50461487	50400908	50461487	+	ENST00000522085.5@LARP4	ENST00000522085.5	protein_coding	50400908,50427762,50428935,50430495,50435488,50437735,50440439,50441590,50453460,50454314,50461135	50401028,50427909,50429090,50430570,50435624,50437838,50440549,50441643,50453672,50454417,50461487	Gene ID= ENSG00000161813.21 TPM= 1.17 Transcript Type= protein_coding
chr12	50453076	50455075	50453076	50455075	-	transcript2496.chr12.nnic@NA	transcript2496.chr12.nnic	NA	50453076	50455075	Gene ID= novel_gene_chr12_2497 TPM= 7.01 Transcript Type= NA
chr12	50504979	50685406	50504979	50685406	+	transcript2500.chr12.nic@DIP2B	transcript2500.chr12.nic	protein_coding	50504979,50625976,50640724,50660194,50671186,50674474,50675329,50678679,50680672,50683138	50505240,50626047,50640852,50660319,50671398,50674629,50675448,50678876,50680763,50685406	Gene ID= ENSG00000066084.12 TPM= 2.34 Transcript Type= NA
chr12	50504979	50682653	50504979	50682653	+	transcript2501.chr12.nic@DIP2B	transcript2501.chr12.nic	protein_coding	50504979,50625976,50640724,50660194,50671186,50674474,50675329,50678679,50680672	50505240,50626047,50640852,50660319,50671398,50674629,50675448,50678876,50682653	Gene ID= ENSG00000066084.12 TPM= 4.67 Transcript Type= NA
chr12	50504979	50680903	50504979	50680903	+	transcript2503.chr12.nnic@DIP2B	transcript2503.chr12.nnic	protein_coding	50504979,50625976,50640724,50660194,50674474,50675329,50678679,50680672	50505240,50626047,50640852,50660319,50674629,50675448,50678876,50680903	Gene ID= ENSG00000066084.12 TPM= 2.34 Transcript Type= NA
chr12	50504985	50680282	50504985	50680282	+	ENST00000549620.5@DIP2B	ENST00000549620.5	protein_coding	50504985,50625976,50640724,50660194,50671186,50674474,50675329,50678679	50505240,50626047,50640852,50660319,50671398,50674629,50675448,50680282	Gene ID= ENSG00000066084.12 TPM= 5.84 Transcript Type= retained_intron
chr12	50505107	50748667	50505107	50748667	+	ENST00000301180.9@DIP2B	ENST00000301180.9	protein_coding	50505107,50625976,50640724,50660194,50671186,50674474,50675329,50678679,50680672,50683138,50685833,50686573,50691049,50692949,50695267,50695848,50697061,50698328,50699066,50704140,50706538,50708448,50714395,50718709,50718955,50721273,50723202,50724775,50727703,50728548,50731369,50732366,50734135,50735073,50737036,50739409,50741416,50744587	50505240,50626047,50640852,50660319,50671398,50674629,50675448,50678876,50680763,50683248,50685956,50686682,50691151,50693013,50695360,50695967,50697175,50698467,50699202,50704220,50706665,50708562,50714596,50718818,50719035,50721396,50723323,50724886,50727812,50728678,50731537,50732536,50734196,50735130,50737110,50739586,50741539,50748667	Gene ID= ENSG00000066084.12 TPM= 14.01 Transcript Type= protein_coding
chr12	50626776	50628773	50626776	50628773	-	transcript2509.chr12.nnic@NA	transcript2509.chr12.nnic	NA	50626776	50628773	Gene ID= novel_gene_chr12_2510 TPM= 4.67 Transcript Type= NA
chr12	50716960	50717188	50716960	50717188	-	transcript2511.chr12.nnic@NA	transcript2511.chr12.nnic	NA	50716960	50717188	Gene ID= novel_gene_chr12_2512 TPM= 3.5 Transcript Type= NA
chr12	50767976	50821122	50767976	50821122	+	transcript2518.chr12.nnic@ATF1	transcript2518.chr12.nnic	protein_coding	50767976,50780140,50795909,50809456,50814010,50814280,50819635	50768223,50780238,50796009,50809589,50814192,50814439,50821122	Gene ID= ENSG00000123268.8 TPM= 4.67 Transcript Type= NA
chr12	50923472	50932510	50923472	50932510	+	ENST00000548553.1@METTL7A	ENST00000548553.1	protein_coding	50923472,50924667,50929914	50924080,50925536,50932510	Gene ID= ENSG00000185432.11 TPM= 67.14 Transcript Type= protein_coding
chr12	50924655	50932503	50924655	50932503	+	transcript2523.chr12.nnic@METTL7A	transcript2523.chr12.nnic	protein_coding	50924655,50929914,50931584	50925536,50930215,50932503	Gene ID= ENSG00000185432.11 TPM= 12.84 Transcript Type= NA
chr12	50924655	50932502	50924655	50932502	+	transcript2535.chr12.nnic@METTL7A	transcript2535.chr12.nnic	protein_coding	50924655,50929914,50931712	50925536,50931564,50932502	Gene ID= ENSG00000185432.11 TPM= 10.51 Transcript Type= NA
chr12	50924983	50932507	50924983	50932507	+	ENST00000547104.1@METTL7A	ENST00000547104.1	protein_coding	50924983,50929914,50931615	50925536,50930291,50932507	Gene ID= ENSG00000185432.11 TPM= 22.18 Transcript Type= nonsense_mediated_decay
chr12	50979820	51026368	50979820	51026368	-	ENST00000546636.5@SLC11A2	ENST00000546636.5	protein_coding	51026315,51010695,51008476,51005311,51004788,51000313,50999345,50999174,50996817,50995629,50994544,50992810,50992190,50991599,50990795,50988382,50981639,50979820	51026368,51010766,51008624,51005436,51004907,51000419,50999415,50999241,50996972,50995787,50994630,50992929,50992339,50991672,50990948,50988435,50981803,50980058	Gene ID= ENSG00000110911.14 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr12	50981009	51026338	50981009	51026338	-	ENST00000547198.5@SLC11A2	ENST00000547198.5	protein_coding	51026315,51010695,51008476,51005311,51004788,51000313,50999345,50999174,50996817,50995629,50994544,50992810,50992190,50991599,50990795,50988382,50981009	51026338,51010766,51008624,51005436,51004907,51000419,50999415,50999241,50996972,50995787,50994630,50992929,50992339,50991672,50990948,50988435,50981803	Gene ID= ENSG00000110911.14 TPM= 8.17 Transcript Type= protein_coding
chr12	50985992	51026384	50985992	51026384	-	ENST00000262052.9@SLC11A2	ENST00000262052.9	protein_coding	51026310,51010695,51008476,51005311,51004788,51000313,50999345,50999174,50996817,50995629,50994544,50992810,50992190,50991599,50990795,50985992	51026384,51010766,51008624,51005436,51004907,51000419,50999415,50999241,50996972,50995787,50994630,50992929,50992339,50991672,50990948,50988435	Gene ID= ENSG00000110911.14 TPM= 49.04 Transcript Type= protein_coding
chr12	50985992	51028275	50985992	51028275	-	ENST00000394904.7@SLC11A2	ENST00000394904.7	protein_coding	51028177,51010695,51008476,51005311,51004788,51000313,50999345,50999174,50996817,50995629,50994544,50992810,50992190,50991599,50990795,50985992	51028275,51010766,51008624,51005436,51004907,51000419,50999415,50999241,50996972,50995787,50994630,50992929,50992339,50991672,50990948,50988435	Gene ID= ENSG00000110911.14 TPM= 4.67 Transcript Type= protein_coding
chr12	50997860	51002651	50997860	51002651	+	transcript2571.chr12.nnic@NA	transcript2571.chr12.nnic	NA	50997860	51002651	Gene ID= novel_gene_chr12_2572 TPM= 11.68 Transcript Type= NA
chr12	51008265	51010527	51008265	51010527	+	transcript2573.chr12.nnic@NA	transcript2573.chr12.nnic	NA	51008265	51010527	Gene ID= novel_gene_chr12_2574 TPM= 10.51 Transcript Type= NA
chr12	51048318	51060421	51048318	51060421	+	ENST00000262055.8@LETMD1	ENST00000262055.8	protein_coding	51048318,51049034,51052092,51053778,51055835,51056144,51056350,51058032,51059361	51048478,51049185,51052207,51053860,51056021,51056245,51056502,51058128,51060421	Gene ID= ENSG00000050426.15 TPM= 32.69 Transcript Type= protein_coding
chr12	51048327	51060421	51048327	51060421	+	transcript2578.chr12.nic@LETMD1	transcript2578.chr12.nic	protein_coding	51048327,51049034,51053778,51055835,51056144,51056350,51058032,51059361	51048371,51049185,51053860,51056021,51056245,51056502,51058128,51060421	Gene ID= ENSG00000050426.15 TPM= 3.12 Transcript Type= NA
chr12	51048327	51060421	51048327	51060421	+	transcript2582.chr12.nic@LETMD1	transcript2582.chr12.nic	protein_coding	51048327,51049034,51053812,51055835,51056144,51056350,51058032,51059361	51048478,51049185,51053860,51056021,51056245,51056502,51058128,51060421	Gene ID= ENSG00000050426.15 TPM= 12.46 Transcript Type= NA
chr12	51048327	51060421	51048327	51060421	+	transcript2603.chr12.nic@LETMD1	transcript2603.chr12.nic	protein_coding	51048327,51056350,51059361	51048478,51056502,51060421	Gene ID= ENSG00000050426.15 TPM= 3.12 Transcript Type= NA
chr12	51048301	51060409	51048301	51060409	+	ENST00000547318.5@LETMD1	ENST00000547318.5	protein_coding	51048301,51049034,51053778,51055835,51056144,51056350,51058032,51059361	51048478,51049185,51053860,51056021,51056245,51056502,51058128,51060409	Gene ID= ENSG00000050426.15 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr12	51048341	51060369	51048341	51060369	+	ENST00000547008.5@LETMD1	ENST00000547008.5	protein_coding	51048341,51049034,51052092,51056350,51058032,51059361	51048478,51049185,51052207,51056502,51058128,51060369	Gene ID= ENSG00000050426.15 TPM= 3.5 Transcript Type= protein_coding
chr12	51048344	51060363	51048344	51060363	+	ENST00000380135.7@LETMD1	ENST00000380135.7	protein_coding	51048344,51049034,51056350,51058006,51059361	51048478,51049185,51056502,51058128,51060363	Gene ID= ENSG00000050426.15 TPM= 8.17 Transcript Type= nonsense_mediated_decay
chr12	51093764	51173066	51093764	51173066	-	transcript2605.chr12.nnic@TFCP2	transcript2605.chr12.nnic	protein_coding	51172301,51118621,51117671,51116315,51110877,51109121,51107236,51106525,51104155,51103670,51101935,51099667,51098776,51095989,51093764	51173066,51118772,51117747,51116420,51110983,51109273,51107346,51106613,51104203,51103763,51102025,51099779,51098918,51096040,51095278	Gene ID= ENSG00000135457.9 TPM= 3.5 Transcript Type= NA
chr12	51197292	51208129	51197292	51208129	-	transcript2615.chr12.nnic@POU6F1	transcript2615.chr12.nnic	protein_coding	51206789,51204173,51199747,51197292	51208129,51204370,51199868,51198686	Gene ID= ENSG00000184271.16 TPM= 4.67 Transcript Type= NA
chr12	51238292	51243933	51238292	51243933	+	ENST00000412716.7@DAZAP2	ENST00000412716.7	protein_coding	51238292,51240343,51240871,51242330	51238920,51240461,51241116,51243933	Gene ID= ENSG00000183283.15 TPM= 469.37 Transcript Type= protein_coding
chr12	51238903	51243785	51238903	51243785	+	ENST00000436900.2@DAZAP2	ENST00000436900.2	protein_coding	51238903,51240343,51240899,51242330	51238920,51240461,51241116,51243785	Gene ID= ENSG00000183283.15 TPM= 54.88 Transcript Type= nonsense_mediated_decay
chr12	51244558	51270890	51244558	51270890	-	ENST00000603798.5@SMAGP	ENST00000603798.5	protein_coding	51270256,51269245,51246751,51244558	51270890,51269316,51246831,51246119	Gene ID= ENSG00000170545.16 TPM= 22.18 Transcript Type= protein_coding
chr12	51245351	51270402	51245351	51270402	-	transcript2633.chr12.nic@SMAGP	transcript2633.chr12.nic	protein_coding	51270256,51269245,51245351	51270402,51269316,51246831	Gene ID= ENSG00000170545.16 TPM= 3.5 Transcript Type= NA
chr12	51245388	51269949	51245388	51269949	-	ENST00000603864.5@SMAGP	ENST00000603864.5	protein_coding	51269245,51246751,51245388	51269949,51246831,51246119	Gene ID= ENSG00000170545.16 TPM= 3.5 Transcript Type= protein_coding
chr12	51245351	51270198	51245351	51270198	-	ENST00000398453.7@SMAGP	ENST00000398453.7	protein_coding	51270059,51269245,51246751,51245351	51270198,51269316,51246831,51246119	Gene ID= ENSG00000170545.16 TPM= 16.35 Transcript Type= protein_coding
chr12	51281038	51287892	51281038	51287892	-	transcript2641.chr12.nnic@BIN2	transcript2641.chr12.nnic	protein_coding	51285945,51284716,51281038	51287892,51285361,51281528	Gene ID= ENSG00000110934.10 TPM= 3.12 Transcript Type= NA
chr12	51281038	51324198	51281038	51324198	-	ENST00000615107.4@BIN2	ENST00000615107.4	protein_coding	51324022,51313823,51303087,51302686,51302020,51299607,51299203,51297089,51295796,51291591,51288108,51284716,51281038	51324198,51313903,51303141,51302780,51302115,51299714,51299288,51297164,51295878,51292344,51288188,51284787,51281528	Gene ID= ENSG00000110934.10 TPM= 32.31 Transcript Type= protein_coding
chr12	51281038	51324154	51281038	51324154	-	ENST00000605039.5@BIN2	ENST00000605039.5	protein_coding	51324022,51313823,51303087,51302020,51299607,51299203,51297089,51295796,51291591,51288108,51284716,51281038	51324154,51313903,51303141,51302780,51299714,51299288,51297164,51295878,51292344,51288188,51284787,51281528	Gene ID= ENSG00000110934.10 TPM= 5.45 Transcript Type= retained_intron
chr12	51322377	51324131	51322377	51324131	-	transcript2643.chr12.nnic@NA	transcript2643.chr12.nnic	NA	51322377	51324131	Gene ID= novel_gene_chr12_2644 TPM= 2.34 Transcript Type= NA
chr12	51351870	51391681	51351870	51391681	-	transcript2646.chr12.nic@GALNT6	transcript2646.chr12.nic	protein_coding	51391601,51383461,51379291,51377195,51365430,51364121,51360721,51359132,51358130,51357349,51355806,51351870	51391681,51383582,51379884,51377367,51365579,51364355,51360838,51359332,51358261,51357450,51355958,51354492	Gene ID= ENSG00000139629.15 TPM= 14.01 Transcript Type= NA
chr12	51906904	51923359	51906904	51923359	+	transcript2655.chr12.nic@ACVRL1	transcript2655.chr12.nic	protein_coding	51906904,51907497,51912470,51913099,51913559,51913974,51914439,51915225,51916036,51918985,51920759	51906993,51907695,51912535,51913350,51913770,51914073,51914585,51915500,51916233,51919115,51923359	Gene ID= ENSG00000139567.12 TPM= 178.15 Transcript Type= NA
chr12	51907314	51919987	51907314	51919987	+	transcript2665.chr12.nic@ACVRL1	transcript2665.chr12.nic	protein_coding	51907314,51912470,51913099,51913559,51913974,51914439,51915225,51916036,51918985	51907695,51912535,51913350,51913770,51914073,51914585,51915500,51916233,51919987	Gene ID= ENSG00000139567.12 TPM= 8.47 Transcript Type= NA
chr12	51907418	51921069	51907418	51921069	+	ENST00000388922.8@ACVRL1	ENST00000388922.8	protein_coding	51907418,51912470,51913099,51913559,51913974,51914439,51915225,51916036,51918985,51920759	51907695,51912535,51913350,51913770,51914073,51914585,51915500,51916233,51919115,51921069	Gene ID= ENSG00000139567.12 TPM= 49.72 Transcript Type= protein_coding
chr12	52006942	52015889	52006942	52015889	+	transcript2692.chr12.nic@GRASP	transcript2692.chr12.nic	protein_coding	52006942,52009190,52010881,52011039,52013877,52014135,52014694	52007265,52009239,52010935,52013780,52013943,52014201,52015889	Gene ID= ENSG00000161835.10 TPM= 23.97 Transcript Type= NA
chr12	52013076	52015886	52013076	52015886	+	transcript2703.chr12.nic@GRASP	transcript2703.chr12.nic	protein_coding	52013076,52013877	52013780,52015886	Gene ID= ENSG00000161835.10 TPM= 15.18 Transcript Type= NA
chr12	52006940	52015864	52006940	52015864	+	ENST00000293662.8@GRASP	ENST00000293662.8	protein_coding	52006940,52009190,52010881,52011039,52013687,52013877,52014135,52014694	52007265,52009239,52010935,52011141,52013780,52013943,52014201,52015864	Gene ID= ENSG00000161835.10 TPM= 415.2 Transcript Type= protein_coding
chr12	52009188	52015889	52009188	52015889	+	ENST00000552963.5@GRASP	ENST00000552963.5	protein_coding	52009188,52010881,52011039,52013687,52013877,52014135,52014694	52009239,52010935,52011141,52013780,52013943,52014201,52015889	Gene ID= ENSG00000161835.10 TPM= 30.96 Transcript Type= processed_transcript
chr12	52011825	52015887	52011825	52015887	+	transcript2705.chr12.nnic@NA	transcript2705.chr12.nnic	NA	52011825	52015887	Gene ID= novel_gene_chr12_2706 TPM= 43.78 Transcript Type= NA
chr12	52037124	52059501	52037124	52059501	+	transcript2716.chr12.nic@NR4A1	transcript2716.chr12.nic	protein_coding	52037124,52041810,52054327,52056030,52056494,52057057,52057352,52058688	52037443,52041929,52055204,52056159,52056645,52057259,52057530,52059501	Gene ID= ENSG00000123358.19 TPM= 45.63 Transcript Type= NA
chr12	52051402	52059506	52051402	52059506	+	ENST00000243050.5@NR4A1	ENST00000243050.5	protein_coding	52051402,52052496,52054327,52056030,52056494,52057057,52057352,52058688	52051568,52052645,52055204,52056159,52056645,52057259,52057530,52059506	Gene ID= ENSG00000123358.19 TPM= 25.78 Transcript Type= protein_coding
chr12	52051402	52059506	52051402	52059506	+	ENST00000394825.5@NR4A1	ENST00000394825.5	protein_coding	52051402,52054327,52056030,52056494,52057057,52057352,52058688	52051568,52055204,52056159,52056645,52057259,52057530,52059506	Gene ID= ENSG00000123358.19 TPM= 128.53 Transcript Type= protein_coding
chr12	52069971	52077494	52069971	52077494	+	ENST00000336854.8@ATG101	ENST00000336854.8	protein_coding	52069971,52070354,52073575,52076786	52070242,52070483,52073902,52077494	Gene ID= ENSG00000123395.14 TPM= 112.09 Transcript Type= protein_coding
chr12	52168996	52192000	52168996	52192000	-	ENST00000394815.2@KRT80	ENST00000394815.2	protein_coding	52191603,52185379,52180903,52180513,52173600,52173038,52172198,52171658,52168996	52192000,52185587,52180963,52180608,52173764,52173163,52172418,52171713,52171522	Gene ID= ENSG00000167767.13 TPM= 11.68 Transcript Type= protein_coding
chr12	52233114	52248921	52233114	52248921	+	ENST00000331817.5@KRT7	ENST00000331817.5	protein_coding	52233114,52235155,52237509,52238680,52241472,52243012,52245412,52248177,52248591	52233620,52235366,52237569,52238775,52241636,52243137,52245632,52248211,52248921	Gene ID= ENSG00000135480.15 TPM= 893.36 Transcript Type= protein_coding
chr12	52244437	52248920	52244437	52248920	+	transcript2763.chr12.nnic@NA	transcript2763.chr12.nnic	NA	52244437	52248920	Gene ID= novel_gene_chr12_2764 TPM= 5.84 Transcript Type= NA
chr12	52487174	52493257	52487174	52493257	-	ENST00000330722.6@KRT6A	ENST00000330722.6	protein_coding	52492649,52491522,52491112,52490858,52490569,52489943,52488328,52488069,52487174	52493257,52491736,52491172,52490953,52490733,52490068,52488548,52488103,52487955	Gene ID= ENSG00000205420.10 TPM= 14.01 Transcript Type= protein_coding
chr12	52514575	52520687	52514575	52520687	-	ENST00000252242.8@KRT5	ENST00000252242.8	protein_coding	52519742,52518946,52518103,52517897,52517590,52517107,52516637,52515798,52514575	52520687,52519160,52518163,52517992,52517754,52517232,52516857,52515832,52515240	Gene ID= ENSG00000186081.11 TPM= 4.67 Transcript Type= protein_coding
chr12	52674736	52677521	52674736	52677521	-	transcript2772.chr12.nic@KRT1	transcript2772.chr12.nic	protein_coding	52677316,52677059,52676275,52675710,52674736	52677521,52677184,52676495,52675744,52675617	Gene ID= ENSG00000167768.4 TPM= 4.67 Transcript Type= NA
chr12	52806549	52814551	52806549	52814551	-	ENST00000551956.1@KRT4	ENST00000551956.1	protein_coding	52813597,52811763,52810756,52809383,52808686,52808294,52807644,52807359,52806549	52814551,52811977,52810816,52809478,52808850,52808419,52807864,52807393,52807250	Gene ID= ENSG00000170477.12 TPM= 8.17 Transcript Type= protein_coding
chr12	52821410	52830462	52821410	52830462	-	ENST00000546453.1@KRT79	ENST00000546453.1	protein_coding	52830232,52830023,52824198,52823887,52823016,52822345,52821410	52830462,52830118,52824362,52824012,52823236,52822379,52822077	Gene ID= ENSG00000185640.5 TPM= 4.67 Transcript Type= retained_intron
chr12	52897194	52905285	52897194	52905285	-	transcript2779.chr12.nic@KRT8	transcript2779.chr12.nic	protein_coding	52904658,52901864,52901159,52900588,52899775,52898679,52898461,52897194	52905285,52902072,52901219,52900683,52900065,52898899,52898519,52897618	Gene ID= ENSG00000170421.12 TPM= 581.46 Transcript Type= NA
chr12	52897208	52905052	52897208	52905052	-	ENST00000546583.5@KRT8	ENST00000546583.5	protein_coding	52904658,52900588,52899775,52898679,52898461,52897208	52905052,52902072,52900065,52898899,52898519,52897618	Gene ID= ENSG00000170421.12 TPM= 2.34 Transcript Type= retained_intron
chr12	52948871	52952900	52948871	52952900	+	ENST00000388837.6@KRT18	ENST00000388837.6	protein_coding	52948871,52949173,52950328,52950750,52951481,52951731,52952119,52952722	52948938,52949590,52950410,52950906,52951645,52951856,52952342,52952900	Gene ID= ENSG00000111057.10 TPM= 47.29 Transcript Type= protein_coding
chr12	52948964	52952901	52948964	52952901	+	ENST00000388835.3@KRT18	ENST00000388835.3	protein_coding	52948964,52950328,52950750,52951481,52951731,52952119,52952722	52949590,52950410,52950906,52951645,52951856,52952342,52952901	Gene ID= ENSG00000111057.10 TPM= 679.54 Transcript Type= protein_coding
chr12	53006158	53042209	53006158	53042209	+	ENST00000262056.13@EIF4B	ENST00000262056.13	protein_coding	53006158,53016473,53018798,53019910,53021806,53022493,53027782,53028015,53033806,53034612,53037409,53038356,53039238,53039630,53040143	53006496,53016610,53019006,53020026,53021860,53022627,53027919,53028188,53034034,53034709,53037622,53038411,53039343,53039702,53042209	Gene ID= ENSG00000063046.17 TPM= 402.14 Transcript Type= protein_coding
chr12	53006456	53040280	53006456	53040280	+	ENST00000420463.7@EIF4B	ENST00000420463.7	protein_coding	53006456,53016473,53018798,53019910,53021806,53022493,53027782,53028015,53033806,53034612,53037409,53038356,53039238,53039630,53040143	53006496,53016610,53019006,53020026,53021860,53022627,53027919,53028188,53034034,53034724,53037622,53038411,53039343,53039702,53040280	Gene ID= ENSG00000063046.17 TPM= 59.55 Transcript Type= protein_coding
chr12	53030415	53032095	53030415	53032095	-	transcript2828.chr12.nnic@NA	transcript2828.chr12.nnic	NA	53030415	53032095	Gene ID= novel_gene_chr12_2829 TPM= 4.67 Transcript Type= NA
chr12	53045204	53047797	53045204	53047797	-	transcript2852.chr12.nic@AC068888.1	transcript2852.chr12.nic	antisense_RNA	53046853,53045961,53045204	53047797,53046061,53045653	Gene ID= ENSG00000257337.6 TPM= 5.84 Transcript Type= NA
chr12	53048949	53064371	53048949	53064371	+	ENST00000314276.7@TNS2	ENST00000314276.7	protein_coding	53048949,53051855,53052455,53053411,53053774,53053965,53054270,53055186,53055568,53055781,53057013,53057567,53057773,53058027,53058316,53058572,53058714,53059047,53060405,53060675,53061380,53061815,53062153,53062376,53062620,53063089,53063349,53063563,53063744	53049248,53051963,53052492,53053449,53053812,53054014,53054441,53055236,53055690,53055845,53057096,53057679,53057833,53058102,53058445,53058637,53058827,53060258,53060555,53061264,53061469,53061940,53062245,53062453,53062697,53063257,53063417,53063592,53064371	Gene ID= ENSG00000111077.17 TPM= 116.76 Transcript Type= protein_coding
chr12	53046969	53064369	53046969	53064369	+	ENST00000379902.7@TNS2	ENST00000379902.7	protein_coding	53046969,53051855,53052455,53053411,53053774,53053965,53054270,53055186,53055568,53055781,53057013,53057567,53057773,53058027,53058316,53058572,53058714,53059047,53060405,53060675,53061380,53061815,53062153,53062376,53062620,53063089,53063349,53063563,53063744	53047063,53051963,53052492,53053449,53053812,53054014,53054441,53055236,53055690,53055845,53057096,53057679,53057833,53058102,53058445,53058637,53058827,53060258,53060555,53061264,53061469,53061940,53062245,53062453,53062697,53063257,53063417,53063592,53064369	Gene ID= ENSG00000111077.17 TPM= 44.37 Transcript Type= protein_coding
chr12	53064316	53079420	53064316	53079420	-	ENST00000301463.8@SPRYD3	ENST00000301463.8	protein_coding	53079311,53077115,53075736,53075095,53074649,53073286,53068155,53067648,53066573,53066314,53064316	53079420,53077261,53075811,53075219,53074784,53073471,53068304,53067705,53066692,53066486,53065966	Gene ID= ENSG00000167778.8 TPM= 41.45 Transcript Type= protein_coding
chr12	53097445	53102340	53097445	53102340	+	ENST00000301464.3@IGFBP6	ENST00000301464.3	protein_coding	53097445,53100712,53101041,53102045	53098051,53100857,53101160,53102340	Gene ID= ENSG00000167779.7 TPM= 37.36 Transcript Type= protein_coding
chr12	53157690	53180596	53157690	53180596	-	ENST00000379850.7@CSAD	ENST00000379850.7	protein_coding	53180567,53173728,53173345,53172522,53172346,53171882,53171326,53170423,53170072,53161273,53161127,53160763,53160120,53159887,53159623,53157690	53180596,53173767,53173476,53172648,53172436,53171988,53171441,53170502,53170126,53161389,53161191,53160844,53160319,53159938,53159712,53158684	Gene ID= ENSG00000139631.18 TPM= 1.17 Transcript Type= protein_coding
chr12	53179717	53180898	53179717	53180898	-	transcript2874.chr12.nnic@NA	transcript2874.chr12.nnic	NA	53179717	53180898	Gene ID= novel_gene_chr12_2875 TPM= 2.34 Transcript Type= NA
chr12	53191318	53207307	53191318	53207307	-	ENST00000267082.9@ITGB7	ENST00000267082.9	protein_coding	53207202,53201072,53200243,53197750,53197493,53196579,53196041,53195626,53195374,53194198,53193708,53193140,53192691,53192330,53191859,53191318	53207307,53201194,53200446,53197951,53197663,53196820,53196199,53195721,53195463,53194344,53193901,53193363,53192910,53192538,53192019,53191636	Gene ID= ENSG00000139626.15 TPM= 14.01 Transcript Type= protein_coding
chr12	53191323	53207282	53191323	53207282	-	ENST00000422257.7@ITGB7	ENST00000422257.7	protein_coding	53207202,53201118,53200243,53197750,53197493,53196579,53196041,53195626,53195374,53194198,53193708,53193140,53192691,53192330,53191859,53191323	53207282,53201194,53200446,53197951,53197663,53196820,53196199,53195721,53195463,53194344,53193901,53193363,53192910,53192538,53192019,53191636	Gene ID= ENSG00000139626.15 TPM= 2.34 Transcript Type= protein_coding
chr12	53210570	53232252	53210570	53232252	-	ENST00000425354.6@RARG	ENST00000425354.6	protein_coding	53231974,53231169,53227362,53215646,53215293,53214446,53214059,53213496,53213085,53210570	53232252,53231235,53227687,53215794,53215434,53214606,53214235,53213700,53213243,53211863	Gene ID= ENSG00000172819.16 TPM= 23.35 Transcript Type= protein_coding
chr12	53251586	53254405	53251586	53254405	+	ENST00000534842.1@MFSD5	ENST00000534842.1	protein_coding	53251586,53252818	53252035,53254405	Gene ID= ENSG00000182544.8 TPM= 8.17 Transcript Type= protein_coding
chr12	53252096	53254404	53252096	53254404	+	ENST00000329548.4@MFSD5	ENST00000329548.4	protein_coding	53252096,53252818	53252268,53254404	Gene ID= ENSG00000182544.8 TPM= 53.71 Transcript Type= protein_coding
chr12	53268299	53293643	53268299	53293643	+	ENST00000257934.8@ESPL1	ENST00000257934.8	protein_coding	53268299,53268755,53269024,53270378,53270678,53272721,53274817,53276620,53277083,53277470,53277821,53279732,53281507,53282264,53283129,53283382,53284058,53285924,53287972,53288538,53289090,53289404,53290085,53290347,53290841,53291690,53291984,53292278,53292574,53292806,53293273	53268377,53268847,53270085,53270482,53270798,53272857,53275010,53276859,53277227,53277608,53277960,53279866,53281626,53282435,53283257,53283538,53284167,53286912,53288341,53288699,53289303,53289594,53290212,53290469,53290996,53291860,53292088,53292393,53292657,53292970,53293643	Gene ID= ENSG00000135476.11 TPM= 2.34 Transcript Type= protein_coding
chr12	53295291	53299450	53295291	53299450	+	ENST00000551018.5@PFDN5	ENST00000551018.5	protein_coding	53295291,53295839,53296244,53297850,53298045,53299269	53295639,53295941,53296275,53297924,53298150,53299450	Gene ID= ENSG00000123349.13 TPM= 241.34 Transcript Type= protein_coding
chr12	53295542	53299447	53295542	53299447	+	transcript2916.chr12.nic@PFDN5	transcript2916.chr12.nic	protein_coding	53295542,53295839,53297850,53298045,53299269	53295639,53296275,53297924,53298150,53299447	Gene ID= ENSG00000123349.13 TPM= 18.33 Transcript Type= NA
chr12	53295525	53299450	53295525	53299450	+	ENST00000351500.7@PFDN5	ENST00000351500.7	protein_coding	53295525,53297850,53298045,53299269	53295639,53297924,53298150,53299450	Gene ID= ENSG00000123349.13 TPM= 21.25 Transcript Type= protein_coding
chr12	53295542	53299450	53295542	53299450	+	ENST00000243040.10@PFDN5	ENST00000243040.10	protein_coding	53295542,53295839,53297850,53298045,53299269	53295639,53295941,53297924,53298150,53299450	Gene ID= ENSG00000123349.13 TPM= 6.07 Transcript Type= nonsense_mediated_decay
chr12	53299686	53307158	53299686	53307158	+	ENST00000267103.9@C12orf10	ENST00000267103.9	protein_coding	53299686,53300150,53303034,53305908,53306198,53306680,53306966	53299953,53300262,53303193,53306060,53306320,53306861,53307158	Gene ID= ENSG00000139637.13 TPM= 42.03 Transcript Type= protein_coding
chr12	53299718	53307171	53299718	53307171	+	ENST00000548845.5@C12orf10	ENST00000548845.5	protein_coding	53299718,53303034,53305908,53306198,53306680,53306966	53300262,53303193,53306060,53306320,53306861,53307171	Gene ID= ENSG00000139637.13 TPM= 12.84 Transcript Type= retained_intron
chr12	53307456	53321631	53307456	53321631	-	ENST00000209873.8@AAAS	ENST00000209873.8	protein_coding	53321343,53320565,53315727,53315335,53315094,53314751,53314298,53309601,53309157,53308960,53308725,53308435,53308282,53308052,53307845,53307456	53321631,53320692,53315782,53315426,53315140,53314849,53314441,53309721,53309281,53309020,53308815,53308528,53308349,53308133,53307929,53307713	Gene ID= ENSG00000094914.12 TPM= 30.74 Transcript Type= protein_coding
chr12	53307460	53321601	53307460	53321601	-	transcript2896.chr12.nic@AAAS	transcript2896.chr12.nic	protein_coding	53321471,53320565,53315727,53315335,53315094,53314751,53314298,53309601,53309157,53308960,53308725,53308435,53308282,53308052,53307845,53307460	53321601,53320692,53315782,53315426,53315140,53314849,53314441,53309721,53309281,53309020,53308815,53308528,53308349,53308133,53307929,53307713	Gene ID= ENSG00000094914.12 TPM= 5.06 Transcript Type= NA
chr12	53307460	53321305	53307460	53321305	-	transcript2897.chr12.nic@AAAS	transcript2897.chr12.nic	protein_coding	53320565,53315727,53315335,53315094,53314751,53314298,53309601,53309157,53308960,53308725,53308435,53308282,53308052,53307845,53307460	53321305,53315782,53315426,53315140,53314849,53314441,53309721,53309281,53309020,53308815,53308528,53308349,53308133,53307929,53307713	Gene ID= ENSG00000094914.12 TPM= 16.73 Transcript Type= NA
chr12	53307457	53321257	53307457	53321257	-	ENST00000552876.5@AAAS	ENST00000552876.5	protein_coding	53320565,53315727,53315335,53315094,53314298,53309601,53309157,53308960,53308725,53308435,53308282,53308052,53307845,53307457	53321257,53315782,53315426,53315140,53314441,53309721,53309281,53309020,53308815,53308528,53308349,53308133,53307929,53307713	Gene ID= ENSG00000094914.12 TPM= 2.34 Transcript Type= retained_intron
chr12	53441732	53446636	53441732	53446636	+	ENST00000551003.5@PRR13	ENST00000551003.5	protein_coding	53441732,53442695,53443487,53446015	53441792,53442733,53443773,53446636	Gene ID= ENSG00000205352.10 TPM= 11.09 Transcript Type= protein_coding
chr12	53441748	53446645	53441748	53446645	+	ENST00000546581.5@PRR13	ENST00000546581.5	protein_coding	53441748,53442695,53443679,53446015	53441792,53442733,53443773,53446645	Gene ID= ENSG00000205352.10 TPM= 3.5 Transcript Type= protein_coding
chr12	53441762	53446638	53441762	53446638	+	ENST00000379786.8@PRR13	ENST00000379786.8	protein_coding	53441762,53442695,53443541,53446015	53441792,53442733,53443773,53446638	Gene ID= ENSG00000205352.10 TPM= 8.76 Transcript Type= protein_coding
chr12	53452129	53479832	53452129	53479832	+	ENST00000359462.9@PCBP2	ENST00000359462.9	protein_coding	53452129,53454726,53455347,53455461,53455885,53459272,53461015,53462481,53464760,53465932,53467221,53467805,53468777,53471638,53479406	53452376,53454869,53455370,53455493,53456001,53459403,53461143,53462567,53464852,53465973,53467293,53467843,53468832,53471807,53479832	Gene ID= ENSG00000197111.15 TPM= 38.82 Transcript Type= protein_coding
chr12	53452102	53481161	53452102	53481161	+	ENST00000447282.5@PCBP2	ENST00000447282.5	protein_coding	53452102,53454726,53455347,53455461,53455885,53459272,53461015,53462481,53465932,53467221,53467805,53468777,53471638,53479406	53452376,53454869,53455370,53455493,53456001,53459403,53461143,53462567,53465973,53467293,53467843,53468832,53471807,53481161	Gene ID= ENSG00000197111.15 TPM= 7.01 Transcript Type= protein_coding
chr12	53452102	53479826	53452102	53479826	+	ENST00000359282.9@PCBP2	ENST00000359282.9	protein_coding	53452102,53454726,53455347,53455461,53455885,53459272,53461015,53462493,53465932,53467221,53467805,53468777,53471638,53479406	53452376,53454869,53455370,53455493,53456001,53459403,53461143,53462567,53465973,53467293,53467843,53468832,53471807,53479826	Gene ID= ENSG00000197111.15 TPM= 32.98 Transcript Type= protein_coding
chr12	53452102	53481161	53452102	53481161	+	ENST00000437231.5@PCBP2	ENST00000437231.5	protein_coding	53452102,53454726,53455347,53455461,53455885,53459272,53461015,53462493,53465932,53467221,53468777,53471638,53479406	53452376,53454869,53455370,53455493,53456001,53459403,53461143,53462567,53465973,53467293,53468832,53471807,53481161	Gene ID= ENSG00000197111.15 TPM= 11.68 Transcript Type= protein_coding
chr12	53452126	53479769	53452126	53479769	+	ENST00000549863.5@PCBP2	ENST00000549863.5	protein_coding	53452126,53454726,53455347,53455461,53455885,53459272,53461015,53462481,53467221,53467805,53468777,53471638,53479406	53452376,53454869,53455370,53455493,53456001,53459403,53461143,53462567,53467293,53467843,53468832,53471807,53479769	Gene ID= ENSG00000197111.15 TPM= 1.17 Transcript Type= protein_coding
chr12	53452368	53479614	53452368	53479614	+	ENST00000552296.6@PCBP2	ENST00000552296.6	protein_coding	53452368,53454726,53455347,53455461,53455885,53459272,53461015,53462493,53464760,53465932,53467221,53467805,53468780,53471638,53479406	53452376,53454869,53455370,53455493,53456001,53459403,53461143,53462567,53464852,53465973,53467293,53467843,53468832,53471807,53479614	Gene ID= ENSG00000197111.15 TPM= 9.92 Transcript Type= protein_coding
chr12	53471926	53474949	53471926	53474949	-	transcript3006.chr12.nnic@NA	transcript3006.chr12.nnic	NA	53471926	53474949	Gene ID= novel_gene_chr12_3007 TPM= 2.34 Transcript Type= NA
chr12	53473765	53477099	53473765	53477099	-	transcript3010.chr12.nnic@NA	transcript3010.chr12.nnic	NA	53473765	53477099	Gene ID= novel_gene_chr12_3011 TPM= 4.67 Transcript Type= NA
chr12	53479669	53499615	53479669	53499615	-	ENST00000267079.6@MAP3K12	ENST00000267079.6	protein_coding	53499427,53487255,53486947,53486439,53486056,53485317,53485056,53484257,53483911,53483607,53483349,53482565,53482299,53481941,53479669	53499615,53487428,53487155,53486622,53486247,53485475,53485214,53484365,53484020,53483723,53483486,53483189,53482369,53482211,53481280	Gene ID= ENSG00000139625.12 TPM= 5.84 Transcript Type= protein_coding
chr12	53481121	53499456	53481121	53499456	-	ENST00000547488.5@MAP3K12	ENST00000547488.5	protein_coding	53499427,53486947,53486439,53486056,53485317,53485056,53484257,53483911,53483607,53483349,53482565,53482299,53481941,53481121	53499456,53487428,53486622,53486247,53485475,53485214,53484365,53484020,53483723,53483486,53483189,53482369,53482211,53481280	Gene ID= ENSG00000139625.12 TPM= 5.84 Transcript Type= protein_coding
chr12	53479673	53484993	53479673	53484993	-	transcript3008.chr12.nnic@NA	transcript3008.chr12.nnic	NA	53479673	53484993	Gene ID= novel_gene_chr12_3009 TPM= 8.17 Transcript Type= NA
chr12	53500166	53501551	53500166	53501551	-	transcript3028.chr12.nnic@NA	transcript3028.chr12.nnic	NA	53500166	53501551	Gene ID= novel_gene_chr12_3029 TPM= 4.67 Transcript Type= NA
chr12	53500923	53506431	53500923	53506431	+	transcript3013.chr12.nic@TARBP2	transcript3013.chr12.nic	protein_coding	53500923,53502015,53503027,53503713,53504397,53504612,53505135,53505649,53505991	53501461,53502184,53503129,53503808,53504469,53504815,53505262,53505850,53506431	Gene ID= ENSG00000139546.10 TPM= 3.5 Transcript Type= NA
chr12	53500926	53506431	53500926	53506431	+	ENST00000266987.6@TARBP2	ENST00000266987.6	protein_coding	53500926,53502015,53503027,53503713,53504397,53504698,53505135,53505649,53505991	53501461,53502184,53503129,53503808,53504469,53504815,53505262,53505850,53506431	Gene ID= ENSG00000139546.10 TPM= 15.18 Transcript Type= protein_coding
chr12	53500980	53506431	53500980	53506431	+	transcript3020.chr12.nic@TARBP2	transcript3020.chr12.nic	protein_coding	53500980,53502015,53503027,53504397,53504698,53505135,53505649,53505991	53501461,53502184,53503808,53504469,53504815,53505262,53505850,53506431	Gene ID= ENSG00000139546.10 TPM= 4.67 Transcript Type= NA
chr12	53501283	53506431	53501283	53506431	+	transcript3022.chr12.nic@TARBP2	transcript3022.chr12.nic	protein_coding	53501283,53502015,53503027,53504612,53505135,53505649,53505991	53501461,53502184,53504469,53504815,53505262,53505850,53506431	Gene ID= ENSG00000139546.10 TPM= 2.34 Transcript Type= NA
chr12	53501278	53506431	53501278	53506431	+	transcript3023.chr12.nic@TARBP2	transcript3023.chr12.nic	protein_coding	53501278,53502015,53503027,53504698,53505135,53505649,53505991	53501461,53502184,53504469,53504815,53505262,53505850,53506431	Gene ID= ENSG00000139546.10 TPM= 4.67 Transcript Type= NA
chr12	53501619	53506412	53501619	53506412	+	ENST00000394357.6@TARBP2	ENST00000394357.6	protein_coding	53501619,53502015,53503027,53503713,53504397,53504698,53505135,53505649,53505991	53501708,53502184,53503129,53503808,53504469,53504815,53505262,53505850,53506412	Gene ID= ENSG00000139546.10 TPM= 1.17 Transcript Type= protein_coding
chr12	53512059	53626407	53512059	53626407	-	ENST00000420353.6@ATF7	ENST00000420353.6	protein_coding	53626279,53600953,53552541,53543330,53537415,53534502,53533160,53532510,53531744,53524564,53523276,53512059	53626407,53601021,53552637,53543448,53537552,53534659,53533259,53532623,53531896,53524761,53523384,53517354	Gene ID= ENSG00000170653.18 TPM= 17.51 Transcript Type= protein_coding
chr12	53513442	53626000	53513442	53626000	-	ENST00000456903.8@ATF7	ENST00000456903.8	protein_coding	53625951,53600953,53552541,53543330,53537415,53534502,53533160,53532510,53531744,53524564,53523276,53513442	53626000,53601021,53552637,53543448,53537552,53534659,53533259,53532623,53531896,53524761,53523384,53517354	Gene ID= ENSG00000170653.18 TPM= 3.5 Transcript Type= protein_coding
chr12	53542887	53625996	53542887	53625996	-	ENST00000548118.6@ATF7	ENST00000548118.6	protein_coding	53625951,53600953,53552541,53542887	53625996,53601021,53552637,53543448	Gene ID= ENSG00000170653.18 TPM= 1.17 Transcript Type= protein_coding
chr12	53542887	53626410	53542887	53626410	-	ENST00000591397.1@ATF7	ENST00000591397.1	protein_coding	53626279,53600953,53552541,53542887	53626410,53601021,53552637,53543448	Gene ID= ENSG00000170653.18 TPM= 9.34 Transcript Type= protein_coding
chr12	53513984	53517608	53513984	53517608	+	ENST00000548347.1@AC023509.2	ENST00000548347.1	antisense_RNA	53513984,53514353,53515509	53514051,53514481,53517608	Gene ID= ENSG00000257550.1 TPM= 2.34 Transcript Type= antisense_RNA
chr12	53711119	53727521	53711119	53727521	-	transcript3053.chr12.nic@CALCOCO1	transcript3053.chr12.nic	protein_coding	53727404,53725087,53724645,53723593,53722025,53721467,53719739,53716260,53715793,53715200,53714598,53714133,53713701,53713100,53712775,53711119	53727521,53725266,53724747,53723783,53722183,53721615,53719829,53716415,53716047,53715325,53714693,53714241,53713900,53713206,53712846,53712121	Gene ID= ENSG00000012822.15 TPM= 17.05 Transcript Type= NA
chr12	53711119	53727452	53711119	53727452	-	transcript3054.chr12.nic@CALCOCO1	transcript3054.chr12.nic	protein_coding	53727404,53725690,53725087,53724645,53723593,53722025,53721467,53719739,53716260,53715793,53715200,53714598,53714133,53713701,53713100,53711119	53727452,53725759,53725266,53724747,53723783,53722183,53721615,53719829,53716415,53716047,53715325,53714693,53714241,53713900,53713206,53712121	Gene ID= ENSG00000012822.15 TPM= 18.24 Transcript Type= NA
chr12	53708517	53727745	53708517	53727745	-	ENST00000262059.8@CALCOCO1	ENST00000262059.8	protein_coding	53727404,53725087,53724645,53723593,53722025,53721467,53719739,53716260,53715793,53715200,53714598,53714133,53713701,53713100,53708517	53727745,53725266,53724747,53723783,53722183,53721615,53719829,53716415,53716047,53715325,53714693,53714241,53713900,53713203,53712121	Gene ID= ENSG00000012822.15 TPM= 5.86 Transcript Type= protein_coding
chr12	53711159	53727466	53711159	53727466	-	transcript3067.chr12.nic@CALCOCO1	transcript3067.chr12.nic	protein_coding	53727404,53725087,53724645,53723593,53722025,53721467,53719739,53716260,53715793,53715200,53714598,53713701,53711159	53727466,53725266,53724747,53723783,53722183,53721615,53719829,53716415,53716047,53715325,53714693,53714241,53713206	Gene ID= ENSG00000012822.15 TPM= 48.57 Transcript Type= NA
chr12	53711159	53727428	53711159	53727428	-	ENST00000548263.5@CALCOCO1	ENST00000548263.5	protein_coding	53727404,53725087,53724645,53723593,53722025,53721467,53719739,53716260,53715793,53715200,53714598,53714133,53713701,53711159	53727428,53725266,53724747,53723783,53722183,53721615,53719829,53716415,53716047,53715325,53714693,53714241,53713900,53713206	Gene ID= ENSG00000012822.15 TPM= 22.71 Transcript Type= protein_coding
chr12	54000119	54003337	54000119	54003337	+	ENST00000303450.4@HOXC9	ENST00000303450.4	protein_coding	54000119,54002430	54000726,54003337	Gene ID= ENSG00000180806.4 TPM= 1.17 Transcript Type= protein_coding
chr12	54126098	54132843	54126098	54132843	+	ENST00000508564.1@LINC02381	ENST00000508564.1	lincRNA	54126098,54131990	54126612,54132843	Gene ID= ENSG00000250742.2 TPM= 4.67 Transcript Type= lincRNA
chr12	54180358	54188957	54180358	54188957	-	ENST00000513838.5@SMUG1	ENST00000513838.5	protein_coding	54188726,54188511,54187819,54183656,54182504,54180358	54188957,54188596,54187905,54183959,54182623,54181647	Gene ID= ENSG00000123415.15 TPM= 1.17 Transcript Type= protein_coding
chr12	54181468	54188953	54181468	54188953	-	transcript3087.chr12.nic@SMUG1	transcript3087.chr12.nic	protein_coding	54188867,54187819,54183656,54181468	54188953,54187902,54183959,54182623	Gene ID= ENSG00000123415.15 TPM= 2.34 Transcript Type= NA
chr12	54181468	54188956	54181468	54188956	-	transcript3094.chr12.nic@SMUG1	transcript3094.chr12.nic	protein_coding	54187819,54183656,54181468	54188956,54183959,54182623	Gene ID= ENSG00000123415.15 TPM= 2.34 Transcript Type= NA
chr12	54181275	54188994	54181275	54188994	-	ENST00000508394.6@SMUG1	ENST00000508394.6	protein_coding	54188951,54183656,54181275	54188994,54183959,54182623	Gene ID= ENSG00000123415.15 TPM= 4.67 Transcript Type= protein_coding
chr12	54181468	54188974	54181468	54188974	-	ENST00000337581.7@SMUG1	ENST00000337581.7	protein_coding	54188951,54187819,54183656,54181468	54188974,54187905,54183959,54182623	Gene ID= ENSG00000123415.15 TPM= 11.68 Transcript Type= protein_coding
chr12	54181471	54188976	54181471	54188976	-	ENST00000243112.9@SMUG1	ENST00000243112.9	protein_coding	54188951,54183656,54182504,54181471	54188976,54183959,54182623,54181647	Gene ID= ENSG00000123415.15 TPM= 3.5 Transcript Type= protein_coding
chr12	54230940	54280102	54230940	54280102	-	ENST00000209875.8@CBX5	ENST00000209875.8	protein_coding	54280008,54257514,54252041,54246115,54230940	54280102,54257692,54252227,54246215,54241905	Gene ID= ENSG00000094916.15 TPM= 157.63 Transcript Type= protein_coding
chr12	54280193	54287087	54280193	54287087	+	ENST00000546500.5@HNRNPA1	ENST00000546500.5	protein_coding	54280193,54281386,54281795,54282090,54282394,54282573,54282800,54283812,54284258,54284549	54280822,54281502,54281941,54282300,54282486,54282665,54282874,54283967,54284317,54287087	Gene ID= ENSG00000135486.17 TPM= 333.93 Transcript Type= protein_coding
chr12	54280748	54287088	54280748	54287088	+	ENST00000547566.5@HNRNPA1	ENST00000547566.5	protein_coding	54280748,54281386,54281795,54282090,54282394,54282573,54282800,54283812,54284258,54286662,54286953	54280822,54281502,54281941,54282300,54282486,54282665,54282874,54283967,54284317,54286732,54287088	Gene ID= ENSG00000135486.17 TPM= 17.51 Transcript Type= nonsense_mediated_decay
chr12	54280755	54285214	54280755	54285214	+	ENST00000340913.10@HNRNPA1	ENST00000340913.10	protein_coding	54280755,54281386,54281795,54282090,54282394,54282573,54282800,54283079,54283812,54284258,54284549	54280822,54281502,54281941,54282300,54282486,54282665,54282874,54283234,54283967,54284317,54285214	Gene ID= ENSG00000135486.17 TPM= 28.02 Transcript Type= protein_coding
chr12	54280775	54284881	54280775	54284881	+	ENST00000330752.12@HNRNPA1	ENST00000330752.12	protein_coding	54280775,54281386,54281795,54282090,54282394,54282573,54282843,54283812,54284258,54284549	54280822,54281502,54281941,54282300,54282486,54282669,54282874,54283967,54284317,54284881	Gene ID= ENSG00000135486.17 TPM= 2.34 Transcript Type= protein_coding
chr12	54292111	54301037	54292111	54301037	-	transcript3119.chr12.nic@NFE2	transcript3119.chr12.nic	protein_coding	54300147,54295135,54292111	54301037,54295304,54293381	Gene ID= ENSG00000123405.13 TPM= 4.67 Transcript Type= NA
chr12	54292111	54301121	54292111	54301121	-	ENST00000435572.6@NFE2	ENST00000435572.6	protein_coding	54300801,54295135,54292111	54301121,54295304,54293381	Gene ID= ENSG00000123405.13 TPM= 10.51 Transcript Type= protein_coding
chr12	54325127	54351849	54325127	54351849	+	ENST00000262061.6@COPZ1	ENST00000262061.6	protein_coding	54325127,54340547,54342206,54343225,54345460,54347767,54348000,54349620,54350476	54325181,54340615,54342287,54343316,54345515,54347844,54348051,54349658,54351849	Gene ID= ENSG00000111481.9 TPM= 101.58 Transcript Type= protein_coding
chr12	54369136	54384723	54369136	54384723	-	ENST00000394313.6@ZNF385A	ENST00000394313.6	protein_coding	54384428,54375844,54373973,54371473,54370927,54370626,54369136	54384723,54375954,54374135,54371715,54371096,54370721,54370486	Gene ID= ENSG00000161642.17 TPM= 19.85 Transcript Type= protein_coding
chr12	54395261	54404882	54395261	54404882	-	transcript3140.chr12.nnic@ITGA5	transcript3140.chr12.nnic	protein_coding	54404703,54404145,54403911,54403625,54403187,54402983,54402180,54402001,54401776,54401585,54401373,54400846,54399864,54399645,54398597,54397365,54395261	54404882,54404246,54403966,54403779,54403324,54403050,54402330,54402093,54401855,54401665,54401478,54400995,54399947,54399758,54398698,54397487,54396376	Gene ID= ENSG00000161638.10 TPM= 21.6 Transcript Type= NA
chr12	54395261	54419460	54395261	54419460	-	ENST00000293379.8@ITGA5	ENST00000293379.8	protein_coding	54418981,54411834,54409485,54409232,54408893,54408756,54408110,54407832,54407649,54405870,54405664,54405166,54404703,54404430,54404145,54403911,54403625,54403187,54402983,54402180,54402001,54401776,54401585,54401373,54400846,54399864,54399645,54398597,54397365,54395261	54419460,54411964,54409597,54409352,54408954,54408801,54408235,54407876,54407692,54405926,54405716,54405374,54404894,54404475,54404246,54403966,54403779,54403324,54403050,54402330,54402093,54401855,54401665,54401478,54400995,54399947,54399758,54398698,54397487,54396376	Gene ID= ENSG00000161638.10 TPM= 290.15 Transcript Type= protein_coding
chr12	54408964	54410800	54408964	54410800	+	transcript3141.chr12.nnic@NA	transcript3141.chr12.nnic	NA	54408964	54410800	Gene ID= novel_gene_chr12_3142 TPM= 2.34 Transcript Type= NA
chr12	54455960	54473570	54455960	54473570	-	ENST00000552395.5@GTSF1	ENST00000552395.5	protein_coding	54473546,54471233,54463171,54462642,54462109,54460377,54459089,54455960	54473570,54471277,54463297,54462725,54462172,54460471,54459125,54456153	Gene ID= ENSG00000170627.10 TPM= 2.34 Transcript Type= processed_transcript
chr12	54455957	54473599	54455957	54473599	-	ENST00000305879.7@GTSF1	ENST00000305879.7	protein_coding	54473546,54471233,54465067,54463171,54462642,54462109,54460377,54459089,54455957	54473599,54471277,54465167,54463297,54462725,54462172,54460471,54459125,54456153	Gene ID= ENSG00000170627.10 TPM= 1.17 Transcript Type= protein_coding
chr12	54497711	54548238	54497711	54548238	+	ENST00000293373.10@NCKAP1L	ENST00000293373.10	protein_coding	54497711,54499355,54500533,54507853,54508389,54509669,54509848,54511803,54511949,54516239,54516896,54517533,54517806,54518651,54518914,54519187,54520694,54521119,54523394,54523825,54526528,54528247,54531260,54531491,54531743,54532170,54535104,54536129,54536944,54538884,54542575	54497891,54499465,54500625,54507909,54508531,54509759,54509985,54511851,54512105,54516295,54516992,54517642,54517938,54518732,54518972,54519332,54520826,54521238,54523539,54523956,54526746,54528377,54531357,54531584,54531825,54532250,54535197,54536245,54537053,54538973,54548238	Gene ID= ENSG00000123338.12 TPM= 4.67 Transcript Type= protein_coding
chr12	54950081	54984672	54950081	54984672	-	ENST00000449076.5@TESPA1	ENST00000449076.5	protein_coding	54984585,54974400,54973477,54967843,54967183,54966388,54966053,54963742,54962431,54961168,54950081	54984672,54974607,54973519,54967892,54967236,54966424,54966151,54963950,54963242,54961267,54950390	Gene ID= ENSG00000135426.15 TPM= 2.34 Transcript Type= protein_coding
chr12	55684568	55707701	55684568	55707701	-	ENST00000553804.5@ITGA7	ENST00000553804.5	protein_coding	55707477,55703051,55702872,55700899,55700262,55698710,55698383,55697938,55697695,55697451,55697216,55696899,55696283,55695522,55694778,55694615,55694443,55694256,55694021,55693141,55692844,55688844,55688202,55687971,55684568	55707701,55703178,55702951,55701154,55700393,55698917,55698576,55698026,55697822,55697546,55697277,55697068,55696432,55695637,55694970,55694695,55694522,55694330,55694123,55693317,55692975,55688957,55688300,55688096,55685288	Gene ID= ENSG00000135424.15 TPM= 18.68 Transcript Type= protein_coding
chr12	55716037	55719703	55716037	55719703	+	ENST00000548925.5@BLOC1S1	ENST00000548925.5	protein_coding	55716037,55716933,55719091,55719499	55716196,55717005,55719223,55719703	Gene ID= ENSG00000135441.7 TPM= 50.79 Transcript Type= protein_coding
chr12	55716081	55719670	55716081	55719670	+	ENST00000553100.1@BLOC1S1	ENST00000553100.1	protein_coding	55716081,55719091,55719499	55716196,55719223,55719670	Gene ID= ENSG00000135441.7 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr12	55716531	55719703	55716531	55719703	+	ENST00000548556.1@BLOC1S1	ENST00000548556.1	protein_coding	55716531,55719091,55719499	55716717,55719223,55719703	Gene ID= ENSG00000135441.7 TPM= 1.75 Transcript Type= protein_coding
chr12	55725470	55728482	55725470	55728482	-	ENST00000552692.5@CD63	ENST00000552692.5	protein_coding	55728276,55727151,55726890,55726700,55726121,55725813,55725470	55728482,55727339,55726964,55726795,55726261,55725896,55725626	Gene ID= ENSG00000135404.11 TPM= 60.71 Transcript Type= protein_coding
chr12	55725482	55729707	55725482	55729707	-	ENST00000549117.5@CD63	ENST00000549117.5	protein_coding	55729282,55728276,55727151,55726890,55726700,55726121,55725813,55725482	55729707,55728352,55727339,55726964,55726795,55726261,55725896,55725626	Gene ID= ENSG00000135404.11 TPM= 10.51 Transcript Type= protein_coding
chr12	55729104	55730852	55729104	55730852	+	ENST00000552576.2@AC009779.2	ENST00000552576.2	antisense_RNA	55729104,55729662	55729355,55730852	Gene ID= ENSG00000258056.2 TPM= 11.68 Transcript Type= antisense_RNA
chr12	55757274	55817756	55757274	55817756	-	ENST00000336133.7@SARNP	ENST00000336133.7	protein_coding	55817666,55803629,55800854,55800562,55796025,55794807,55794359,55790567,55789075,55760551,55757274	55817756,55803728,55800900,55800629,55796076,55794880,55794387,55790592,55789143,55760640,55757553	Gene ID= ENSG00000205323.8 TPM= 35.03 Transcript Type= protein_coding
chr12	55817919	55821879	55817919	55821879	+	ENST00000243045.9@ORMDL2	ENST00000243045.9	protein_coding	55817919,55818999,55819342,55820260	55818112,55819173,55819493,55821879	Gene ID= ENSG00000123353.9 TPM= 19.85 Transcript Type= protein_coding
chr12	55820960	55829594	55820960	55829594	-	transcript3181.chr12.nic@DNAJC14	transcript3181.chr12.nic	protein_coding	55829141,55827252,55823402,55823070,55822572,55822373,55820960	55829594,55828714,55823508,55823189,55822732,55822475,55822187	Gene ID= ENSG00000135392.15 TPM= 22.57 Transcript Type= NA
chr12	55820960	55830832	55820960	55830832	-	transcript3184.chr12.nic@DNAJC14	transcript3184.chr12.nic	protein_coding	55830696,55827252,55823402,55823070,55822572,55822373,55820960	55830832,55828714,55823508,55823189,55822732,55822475,55822187	Gene ID= ENSG00000135392.15 TPM= 12.06 Transcript Type= NA
chr12	55820960	55830781	55820960	55830781	-	ENST00000357606.7@DNAJC14	ENST00000357606.7	protein_coding	55830696,55829489,55827252,55823402,55823070,55822572,55822373,55820960	55830781,55829636,55828714,55823508,55823189,55822732,55822475,55822187	Gene ID= ENSG00000135392.15 TPM= 56.43 Transcript Type= protein_coding
chr12	55830841	55836244	55830841	55836244	+	ENST00000508246.6@TMEM198B	ENST00000508246.6	transcribed_unitary_pseudogene	55830841,55831257,55832959,55834851	55831083,55831349,55833541,55836244	Gene ID= ENSG00000182796.13 TPM= 7.01 Transcript Type= processed_transcript
chr12	55836426	55839780	55836426	55839780	-	transcript3203.chr12.nic@MMP19	transcript3203.chr12.nic	protein_coding	55838500,55837843,55837555,55836426	55839780,55838007,55837682,55837374	Gene ID= ENSG00000123342.15 TPM= 8.17 Transcript Type= NA
chr12	55836426	55839262	55836426	55839262	-	transcript3208.chr12.nic@MMP19	transcript3208.chr12.nic	protein_coding	55837843,55836426	55839262,55837374	Gene ID= ENSG00000123342.15 TPM= 7.01 Transcript Type= NA
chr12	55836426	55842922	55836426	55842922	-	ENST00000322569.8@MMP19	ENST00000322569.8	protein_coding	55842744,55842353,55841106,55840667,55839496,55838606,55837843,55837555,55836426	55842922,55842438,55841236,55840882,55839741,55838734,55838007,55837682,55837374	Gene ID= ENSG00000123342.15 TPM= 16.35 Transcript Type= protein_coding
chr12	55913818	55927120	55913818	55927120	-	transcript3231.chr12.nnic@PYM1	transcript3231.chr12.nnic	protein_coding	55927076,55915443,55913818	55927120,55915531,55914366	Gene ID= ENSG00000170473.16 TPM= 2.34 Transcript Type= NA
chr12	55901413	55927913	55901413	55927913	-	ENST00000408946.6@PYM1	ENST00000408946.6	protein_coding	55927725,55903387,55901413	55927913,55903480,55902355	Gene ID= ENSG00000170473.16 TPM= 18.68 Transcript Type= protein_coding
chr12	55901414	55927112	55901414	55927112	-	ENST00000398213.4@PYM1	ENST00000398213.4	protein_coding	55927076,55903387,55901414	55927112,55903480,55902355	Gene ID= ENSG00000170473.16 TPM= 4.67 Transcript Type= protein_coding
chr12	55932031	55954021	55932031	55954021	+	transcript3214.chr12.nic@DGKA	transcript3214.chr12.nic	protein_coding	55932031,55936423,55937017,55937408,55937978,55938511,55938915,55939186,55939415,55940082,55940314,55940624,55940897,55941252,55941510,55941998,55942174,55951623,55952035,55952341,55952734,55953040,55953350,55953685	55932123,55936567,55937090,55937543,55938052,55938560,55938989,55939305,55939529,55940170,55940433,55940722,55940980,55941325,55941584,55942083,55942263,55951783,55952099,55952431,55952932,55953160,55953410,55954021	Gene ID= ENSG00000065357.19 TPM= 12.84 Transcript Type= NA
chr12	55932028	55954021	55932028	55954021	+	ENST00000394147.5@DGKA	ENST00000394147.5	protein_coding	55932028,55936423,55937017,55937408,55937978,55938511,55938915,55939186,55939415,55940082,55940314,55940624,55940897,55941252,55941510,55941998,55942174,55951623,55952035,55952341,55952734,55953040,55953350,55953685	55932255,55936567,55937090,55937543,55938052,55938560,55938989,55939305,55939529,55940170,55940433,55940722,55940980,55941325,55941584,55942083,55942263,55951783,55952099,55952431,55952932,55953160,55953410,55954021	Gene ID= ENSG00000065357.19 TPM= 3.5 Transcript Type= protein_coding
chr12	55954105	55966662	55954105	55966662	-	ENST00000552882.5@PMEL	ENST00000552882.5	protein_coding	55966293,55965936,55961622,55961317,55958473,55957923,55956949,55956103,55955779,55955464,55955274,55954105	55966662,55966062,55961732,55961463,55958607,55958084,55957671,55956219,55955863,55955669,55955361,55954349	Gene ID= ENSG00000185664.14 TPM= 4.67 Transcript Type= protein_coding
chr12	55954106	55966042	55954106	55966042	-	ENST00000550464.5@PMEL	ENST00000550464.5	protein_coding	55965936,55958473,55957923,55956949,55956103,55955779,55955464,55955274,55954106	55966042,55958607,55958084,55957671,55956219,55955863,55955669,55955361,55954349	Gene ID= ENSG00000185664.14 TPM= 1.17 Transcript Type= protein_coding
chr12	55954105	55966022	55954105	55966022	-	ENST00000449260.6@PMEL	ENST00000449260.6	protein_coding	55965936,55961622,55961317,55958473,55957923,55956949,55956103,55955779,55955464,55955274,55954105	55966022,55961732,55961463,55958607,55958084,55957671,55956219,55955863,55955669,55955382,55954349	Gene ID= ENSG00000185664.14 TPM= 2.34 Transcript Type= protein_coding
chr12	55966769	55972784	55966769	55972784	+	ENST00000266970.8@CDK2	ENST00000266970.8	protein_coding	55966769,55967857,55968049,55968778,55969475,55971044,55971521	55967124,55967934,55968169,55968948,55969576,55971247,55972784	Gene ID= ENSG00000123374.10 TPM= 50.21 Transcript Type= protein_coding
chr12	55966796	55972784	55966796	55972784	+	transcript3243.chr12.nnic@CDK2	transcript3243.chr12.nnic	protein_coding	55966796,55968049,55968875,55969475,55971044,55971521	55967934,55968169,55968948,55969576,55971247,55972784	Gene ID= ENSG00000123374.10 TPM= 3.5 Transcript Type= NA
chr12	55974011	55996683	55974011	55996683	+	ENST00000360299.9@RAB5B	ENST00000360299.9	protein_coding	55974011,55986869,55989947,55990682,55991360,55992097	55974139,55987123,55990098,55990804,55991453,55996683	Gene ID= ENSG00000111540.15 TPM= 201.99 Transcript Type= protein_coding
chr12	55997180	56005525	55997180	56005525	+	ENST00000356124.8@SUOX	ENST00000356124.8	protein_coding	55997180,56002212,56002543,56003618	55997339,56002271,56002720,56005525	Gene ID= ENSG00000139531.12 TPM= 5.84 Transcript Type= protein_coding
chr12	55997231	56005525	55997231	56005525	+	ENST00000266971.7@SUOX	ENST00000266971.7	protein_coding	55997231,55997615,56002212,56002543,56003618	55997339,55997723,56002271,56002720,56005525	Gene ID= ENSG00000139531.12 TPM= 23.35 Transcript Type= protein_coding
chr12	55997288	56005486	55997288	56005486	+	ENST00000394115.6@SUOX	ENST00000394115.6	protein_coding	55997288,55997615,55999333,56002212,56002543,56003618	55997339,55997723,55999458,56002271,56002720,56005486	Gene ID= ENSG00000139531.12 TPM= 5.84 Transcript Type= protein_coding
chr12	56041853	56044675	56041853	56044675	+	ENST00000356464.9@RPS26	ENST00000356464.9	protein_coding	56041853,56042425,56043363,56044119	56042169,56042602,56043493,56044675	Gene ID= ENSG00000197728.9 TPM= 4.67 Transcript Type= protein_coding
chr12	56042140	56044223	56042140	56044223	+	ENST00000548590.1@RPS26	ENST00000548590.1	protein_coding	56042140,56042425,56044119	56042169,56043493,56044223	Gene ID= ENSG00000197728.9 TPM= 2.34 Transcript Type= retained_intron
chr12	56080137	56085623	56080137	56085623	+	ENST00000411731.6@ERBB3	ENST00000411731.6	protein_coding	56080137,56083751,56084995	56080382,56083902,56085623	Gene ID= ENSG00000065361.14 TPM= 3.5 Transcript Type= protein_coding
chr12	56081210	56084869	56081210	56084869	+	transcript3271.chr12.nnic@NA	transcript3271.chr12.nnic	NA	56081210	56084869	Gene ID= novel_gene_chr12_3272 TPM= 2.34 Transcript Type= NA
chr12	56104319	56113861	56104319	56113861	+	ENST00000303305.10@PA2G4	ENST00000303305.10	protein_coding	56104319,56106588,56106990,56107187,56107521,56109230,56109857,56110399,56110559,56110964,56111182,56111476,56112823	56104825,56106716,56107095,56107256,56107613,56109293,56109935,56110477,56110692,56111058,56111309,56111529,56113861	Gene ID= ENSG00000170515.13 TPM= 72.39 Transcript Type= protein_coding
chr12	56116590	56117832	56116590	56117832	+	ENST00000501597.3@RPL41	ENST00000501597.3	protein_coding	56116590,56116775,56117189,56117482	56116659,56116799,56117211,56117832	Gene ID= ENSG00000229117.8 TPM= 1532.56 Transcript Type= protein_coding
chr12	56116586	56117943	56116586	56117943	+	ENST00000546591.5@RPL41	ENST00000546591.5	protein_coding	56116586,56117189,56117482	56116799,56117211,56117943	Gene ID= ENSG00000229117.8 TPM= 113.93 Transcript Type= protein_coding
chr12	56116633	56117826	56116633	56117826	+	ENST00000358888.7@RPL41	ENST00000358888.7	protein_coding	56116633,56116775,56117189,56117482	56116659,56116930,56117211,56117826	Gene ID= ENSG00000229117.8 TPM= 16.64 Transcript Type= processed_transcript
chr12	56118159	56127514	56118159	56127514	+	ENST00000257940.6@ZC3H10	ENST00000257940.6	protein_coding	56118159,56119088,56120511	56118318,56119151,56127514	Gene ID= ENSG00000135482.6 TPM= 36.2 Transcript Type= protein_coding
chr12	56128056	56144671	56128056	56144671	+	ENST00000394048.9@ESYT1	ENST00000394048.9	protein_coding	56128056,56130582,56130791,56131040,56131244,56131477,56131749,56132209,56132421,56132719,56133417,56133588,56133781,56134110,56134342,56136744,56137218,56137499,56137832,56138026,56138183,56138404,56138768,56138927,56142285,56142578,56142835,56143017,56143228,56143580,56143823	56128709,56130623,56130925,56131113,56131316,56131566,56131804,56132332,56132597,56132801,56133465,56133674,56133873,56134181,56134428,56136893,56137373,56137675,56137914,56138074,56138272,56138499,56138839,56139013,56142425,56142732,56142933,56143148,56143333,56143629,56144671	Gene ID= ENSG00000139641.12 TPM= 190.32 Transcript Type= protein_coding
chr12	56152541	56157981	56152541	56157981	+	transcript3338.chr12.nic@MYL6B	transcript3338.chr12.nic	protein_coding	56152541,56153873,56154813,56155055,56155419,56157468,56157698,56157882	56152631,56154092,56154840,56155198,56155592,56157545,56157735,56157981	Gene ID= ENSG00000196465.10 TPM= 11.68 Transcript Type= NA
chr12	56157357	56157976	56157357	56157976	+	ENST00000550550.5@MYL6B	ENST00000550550.5	protein_coding	56157357,56157698,56157882	56157545,56157735,56157976	Gene ID= ENSG00000196465.10 TPM= 4.67 Transcript Type= retained_intron
chr12	56158161	56161574	56158161	56161574	+	ENST00000550697.5@MYL6	ENST00000550697.5	protein_coding	56158161,56158684,56159587,56159975,56160243,56160626,56161387	56158404,56158711,56159730,56160148,56160320,56160670,56161574	Gene ID= ENSG00000092841.18 TPM= 565.61 Transcript Type= protein_coding
chr12	56158346	56161575	56158346	56161575	+	ENST00000548580.5@MYL6	ENST00000548580.5	protein_coding	56158346,56158684,56159975,56160243,56161387	56158404,56158711,56160148,56160320,56161575	Gene ID= ENSG00000092841.18 TPM= 63.05 Transcript Type= protein_coding
chr12	56158362	56161574	56158362	56161574	+	ENST00000547649.5@MYL6	ENST00000547649.5	protein_coding	56158362,56158684,56159587,56159975,56160243,56161387	56158404,56158711,56159730,56160148,56160320,56161574	Gene ID= ENSG00000092841.18 TPM= 572.12 Transcript Type= protein_coding
chr12	56158356	56161587	56158356	56161587	+	ENST00000348108.8@MYL6	ENST00000348108.8	protein_coding	56158356,56158681,56159587,56159975,56160243,56160626,56161387	56158404,56158711,56159730,56160148,56160320,56160670,56161587	Gene ID= ENSG00000092841.18 TPM= 89.23 Transcript Type= protein_coding
chr12	56158382	56161575	56158382	56161575	+	ENST00000548400.5@MYL6	ENST00000548400.5	protein_coding	56158382,56158684,56159587,56159975,56160243,56160626,56161387	56158404,56158711,56159622,56160148,56160320,56160670,56161575	Gene ID= ENSG00000092841.18 TPM= 63.34 Transcript Type= protein_coding
chr12	56158349	56161550	56158349	56161550	+	ENST00000550184.5@MYL6	ENST00000550184.5	protein_coding	56158349,56158684,56159975,56160243,56160626,56161387	56158404,56159730,56160148,56160320,56160670,56161550	Gene ID= ENSG00000092841.18 TPM= 2.34 Transcript Type= retained_intron
chr12	56162365	56189483	56162365	56189483	-	transcript3308.chr12.nic@SMARCC2	transcript3308.chr12.nic	protein_coding	56189351,56187187,56186155,56185030,56184844,56184175,56183861,56182004,56181704,56181482,56180977,56178997,56178810,56178404,56178022,56174651,56173696,56172585,56172428,56171679,56171271,56170144,56169776,56169529,56168060,56165318,56164648,56164303,56162365	56189483,56187306,56186240,56185111,56184936,56184244,56183930,56182079,56181835,56181597,56181101,56179056,56178847,56178534,56178093,56174764,56173849,56172704,56172490,56171937,56171432,56170208,56169911,56169695,56168194,56165699,56164731,56164368,56163765	Gene ID= ENSG00000139613.11 TPM= 9.92 Transcript Type= NA
chr12	56162359	56189499	56162359	56189499	-	transcript3313.chr12.nic@SMARCC2	transcript3313.chr12.nic	protein_coding	56189351,56187187,56186155,56185030,56184844,56184175,56183861,56182004,56181704,56181482,56180977,56178997,56178810,56178404,56178022,56174651,56173696,56172585,56172428,56171679,56171271,56170144,56169776,56169529,56168060,56165318,56164648,56162359	56189499,56187306,56186240,56185111,56184936,56184244,56183930,56182079,56181835,56181597,56181101,56179056,56178847,56178534,56178093,56174764,56173849,56172704,56172490,56171937,56171432,56170208,56169911,56169695,56168194,56165699,56164731,56163765	Gene ID= ENSG00000139613.11 TPM= 22.77 Transcript Type= NA
chr12	56163330	56189548	56163330	56189548	-	ENST00000347471.8@SMARCC2	ENST00000347471.8	protein_coding	56189351,56187187,56186155,56185030,56184844,56184175,56183861,56182004,56181704,56181482,56180977,56178997,56178810,56178404,56178022,56174651,56173696,56172937,56172585,56172428,56171679,56171271,56170144,56169776,56169529,56168060,56165318,56164648,56163330	56189548,56187306,56186240,56185111,56184936,56184244,56183930,56182079,56181835,56181597,56181101,56179056,56178847,56178534,56178093,56174764,56173849,56173029,56172704,56172490,56171937,56171432,56170208,56169911,56169695,56168194,56165699,56164731,56163765	Gene ID= ENSG00000139613.11 TPM= 40.28 Transcript Type= protein_coding
chr12	56163345	56189548	56163345	56189548	-	ENST00000267064.8@SMARCC2	ENST00000267064.8	protein_coding	56189351,56187187,56186155,56185030,56184844,56184175,56183861,56182004,56181704,56181482,56180977,56178997,56178810,56178404,56178022,56174651,56173696,56172585,56172428,56171679,56171271,56170144,56169776,56169529,56168060,56165318,56164303,56163345	56189548,56187306,56186240,56185111,56184936,56184244,56183930,56182079,56181835,56181597,56181101,56179056,56178847,56178534,56178093,56174764,56173849,56172704,56172490,56171937,56171432,56170208,56169911,56169695,56168194,56165699,56164731,56163765	Gene ID= ENSG00000139613.11 TPM= 60.71 Transcript Type= protein_coding
chr12	56163328	56189476	56163328	56189476	-	ENST00000550164.5@SMARCC2	ENST00000550164.5	protein_coding	56189351,56187187,56186155,56185030,56184844,56184175,56183861,56182004,56181704,56181482,56180977,56178997,56178810,56178404,56178022,56174651,56173696,56172937,56172585,56172428,56171679,56171271,56170144,56169776,56169529,56168060,56165318,56164303,56163328	56189476,56187306,56186240,56185111,56184936,56184244,56183930,56182079,56181835,56181597,56181101,56179056,56178847,56178534,56178093,56174764,56173849,56173029,56172704,56172490,56171937,56171432,56170208,56169911,56169695,56168194,56165699,56164731,56163765	Gene ID= ENSG00000139613.11 TPM= 19.27 Transcript Type= protein_coding
chr12	56205450	56221909	56205450	56221909	-	ENST00000394013.6@RNF41	ENST00000394013.6	protein_coding	56221760,56216429,56213958,56212996,56210297,56208163,56207646,56205450	56221909,56216613,56214070,56213138,56210568,56208298,56207749,56206798	Gene ID= ENSG00000181852.17 TPM= 1.17 Transcript Type= protein_coding
chr12	56224325	56229854	56224325	56229854	+	ENST00000267023.8@NABP2	ENST00000267023.8	protein_coding	56224325,56224834,56225373,56225624,56226179,56226356,56229014	56224441,56224935,56225511,56225695,56226260,56226419,56229854	Gene ID= ENSG00000139579.12 TPM= 26.85 Transcript Type= protein_coding
chr12	56224359	56229854	56224359	56229854	+	ENST00000380198.6@NABP2	ENST00000380198.6	protein_coding	56224359,56225373,56225624,56226179,56226356,56229014	56224935,56225511,56225695,56226260,56226419,56229854	Gene ID= ENSG00000139579.12 TPM= 8.17 Transcript Type= protein_coding
chr12	56255194	56258384	56255194	56258384	-	transcript3401.chr12.nic@ANKRD52	transcript3401.chr12.nic	protein_coding	56258243,56255194	56258384,56257911	Gene ID= ENSG00000139645.9 TPM= 2.34 Transcript Type= NA
chr12	56239803	56241528	56239803	56241528	-	transcript3402.chr12.nnic@NA	transcript3402.chr12.nnic	NA	56239803	56241528	Gene ID= novel_gene_chr12_3403 TPM= 2.34 Transcript Type= NA
chr12	56266858	56270964	56266858	56270964	+	ENST00000308197.9@COQ10A	ENST00000308197.9	protein_coding	56266858,56267794,56269059,56269460,56270150	56267252,56267940,56269251,56269561,56270964	Gene ID= ENSG00000135469.13 TPM= 3.89 Transcript Type= protein_coding
chr12	56266937	56270966	56266937	56270966	+	transcript3407.chr12.nic@COQ10A	transcript3407.chr12.nic	protein_coding	56266937,56267794,56270150	56267252,56269561,56270966	Gene ID= ENSG00000135469.13 TPM= 4.67 Transcript Type= NA
chr12	56267283	56270966	56267283	56270966	+	ENST00000433805.6@COQ10A	ENST00000433805.6	protein_coding	56267283,56267794,56269059,56269460,56270150	56267433,56267940,56269251,56269561,56270966	Gene ID= ENSG00000135469.13 TPM= 3.89 Transcript Type= protein_coding
chr12	56267682	56270964	56267682	56270964	+	ENST00000546544.5@COQ10A	ENST00000546544.5	protein_coding	56267682,56269059,56269460,56270150	56267940,56269251,56269561,56270964	Gene ID= ENSG00000135469.13 TPM= 1.55 Transcript Type= protein_coding
chr12	56271701	56300391	56271701	56300391	-	ENST00000548567.5@CS	ENST00000548567.5	protein_coding	56300160,56298609,56286595,56285916,56283792,56282860,56282420,56275996,56275002,56274777,56273587,56271701	56300391,56298691,56286645,56286023,56283857,56282991,56282608,56276195,56275131,56274878,56273796,56273254	Gene ID= ENSG00000062485.18 TPM= 10.53 Transcript Type= protein_coding
chr12	56271701	56300406	56271701	56300406	-	transcript3427.chr12.nic@CS	transcript3427.chr12.nic	protein_coding	56300160,56285916,56283792,56282860,56282420,56275996,56275002,56274777,56273587,56271701	56300406,56286645,56283857,56282991,56282608,56276195,56275131,56274878,56273796,56273254	Gene ID= ENSG00000062485.18 TPM= 13.57 Transcript Type= NA
chr12	56271701	56300406	56271701	56300406	-	transcript3428.chr12.nic@CS	transcript3428.chr12.nic	protein_coding	56300160,56286595,56285916,56282860,56282420,56275996,56275002,56274777,56273587,56271701	56300406,56286645,56286023,56282991,56282608,56276195,56275131,56274878,56273796,56273254	Gene ID= ENSG00000062485.18 TPM= 17.07 Transcript Type= NA
chr12	56271701	56300392	56271701	56300392	-	ENST00000351328.7@CS	ENST00000351328.7	protein_coding	56300160,56286595,56285916,56283792,56282860,56282420,56275996,56275002,56274777,56273587,56271701	56300392,56286645,56286023,56283857,56282991,56282608,56276195,56275131,56274878,56273796,56273254	Gene ID= ENSG00000062485.18 TPM= 210.19 Transcript Type= protein_coding
chr12	56300142	56314788	56300142	56314788	+	ENST00000549565.1@AC073896.2	ENST00000549565.1	antisense_RNA	56300142,56312407,56314529	56300187,56312499,56314788	Gene ID= ENSG00000257303.1 TPM= 3.5 Transcript Type= antisense_RNA
chr12	56310428	56316336	56310428	56316336	-	ENST00000273308.8@CNPY2	ENST00000273308.8	protein_coding	56315821,56315130,56314851,56311211,56310958,56310428	56316336,56315242,56314966,56311414,56311054,56310595	Gene ID= ENSG00000257727.5 TPM= 58.38 Transcript Type= protein_coding
chr12	56310433	56316169	56310433	56316169	-	transcript3435.chr12.nnic@CNPY2	transcript3435.chr12.nnic	protein_coding	56315878,56315130,56314851,56311211,56310958,56310433	56316169,56315242,56314966,56311414,56311054,56310595	Gene ID= ENSG00000257727.5 TPM= 4.09 Transcript Type= NA
chr12	56314490	56316047	56314490	56316047	-	ENST00000548013.5@CNPY2	ENST00000548013.5	protein_coding	56315821,56315130,56314490	56316047,56315242,56314966	Gene ID= ENSG00000257727.5 TPM= 5.84 Transcript Type= retained_intron
chr12	56316223	56334053	56316223	56334053	-	ENST00000610546.4@PAN2	ENST00000610546.4	protein_coding	56333862,56332813,56328472,56328238,56327995,56327364,56326617,56326313,56325335,56325009,56324581,56324294,56324037,56323807,56323500,56323311,56323062,56322615,56322423,56322078,56319864,56319621,56319308,56319088,56318237,56316223	56334053,56333208,56328641,56328358,56328072,56327631,56326959,56326409,56325454,56325128,56324709,56324493,56324185,56323913,56323598,56323384,56323209,56322758,56322482,56322168,56320021,56319764,56319487,56319181,56318434,56317643	Gene ID= ENSG00000135473.14 TPM= 2.57 Transcript Type= protein_coding
chr12	56316936	56334053	56316936	56334053	-	ENST00000440411.7@PAN2	ENST00000440411.7	protein_coding	56333862,56332813,56328472,56328238,56327995,56327364,56326617,56326313,56325335,56325009,56324581,56324294,56324049,56323807,56323500,56323311,56323062,56322615,56322423,56322078,56319864,56319621,56319308,56319088,56318237,56316936	56334053,56333208,56328641,56328358,56328072,56327631,56326959,56326409,56325454,56325128,56324709,56324493,56324185,56323913,56323598,56323384,56323209,56322758,56322482,56322168,56320021,56319764,56319487,56319181,56318434,56317643	Gene ID= ENSG00000135473.14 TPM= 8.41 Transcript Type= protein_coding
chr12	56316941	56334021	56316941	56334021	-	transcript3453.chr12.nic@PAN2	transcript3453.chr12.nic	protein_coding	56333862,56332813,56328472,56328238,56327995,56327364,56326617,56326313,56325335,56325009,56324581,56324294,56324049,56323807,56323500,56323311,56322615,56322423,56322078,56319864,56319621,56319308,56319088,56318237,56316941	56334021,56333208,56328641,56328358,56328072,56327631,56326959,56326409,56325454,56325128,56324709,56324493,56324182,56323913,56323598,56323384,56323209,56322482,56322168,56320021,56319764,56319487,56319181,56318434,56317643	Gene ID= ENSG00000135473.14 TPM= 7.24 Transcript Type= NA
chr12	56316941	56334021	56316941	56334021	-	transcript3463.chr12.nic@PAN2	transcript3463.chr12.nic	protein_coding	56333862,56332813,56328472,56328238,56327995,56327364,56326313,56325335,56325009,56324581,56323807,56323500,56323311,56322615,56322423,56322078,56319864,56319621,56319088,56318237,56316941	56334021,56333208,56328641,56328358,56328072,56327631,56326959,56325454,56325128,56324709,56324493,56323598,56323384,56323209,56322482,56322168,56320021,56319764,56319487,56318434,56317643	Gene ID= ENSG00000135473.14 TPM= 8.41 Transcript Type= NA
chr12	56316937	56334006	56316937	56334006	-	ENST00000257931.9@PAN2	ENST00000257931.9	protein_coding	56333862,56332813,56328472,56328238,56327995,56327364,56326617,56326313,56325335,56325009,56324581,56324294,56324037,56323807,56323500,56323311,56323062,56322615,56322423,56322078,56319864,56319621,56319308,56319088,56318237,56316937	56334006,56333208,56328641,56328358,56328072,56327631,56326959,56326409,56325454,56325128,56324709,56324493,56324182,56323913,56323598,56323384,56323209,56322758,56322482,56322168,56320021,56319764,56319487,56319181,56318434,56317643	Gene ID= ENSG00000135473.14 TPM= 2.57 Transcript Type= protein_coding
chr12	56417119	56449403	56417119	56449403	-	ENST00000229201.4@TIMELESS	ENST00000229201.4	protein_coding	56449310,56434074,56433773,56433538,56433381,56433026,56432369,56431471,56430881,56430105,56428883,56428549,56428236,56425015,56424762,56423797,56423584,56423274,56422847,56422106,56421899,56421727,56421351,56420963,56420813,56420569,56418134,56417907,56417119	56449403,56434231,56433926,56433652,56433443,56433127,56432521,56431604,56430968,56430281,56429100,56428652,56428405,56425152,56424913,56423894,56423707,56423475,56422992,56422191,56422016,56421809,56421493,56421134,56420881,56420687,56418359,56418008,56417786	Gene ID= ENSG00000111602.11 TPM= 21.02 Transcript Type= protein_coding
chr12	56470944	56488414	56470944	56488414	-	ENST00000623608.3@GLS2	ENST00000623608.3	protein_coding	56487937,56480288,56479780,56478183,56477933,56477660,56475945,56475624,56475044,56474846,56474544,56473463,56473228,56472690,56472119,56471773,56470944	56488414,56480387,56479901,56478262,56478096,56477718,56475977,56475682,56475110,56474896,56474720,56473594,56473320,56472751,56472195,56471836,56471643	Gene ID= ENSG00000135423.12 TPM= 3.5 Transcript Type= protein_coding
chr12	56470952	56488397	56470952	56488397	-	ENST00000311966.8@GLS2	ENST00000311966.8	protein_coding	56487937,56480288,56479780,56479052,56478183,56477933,56477660,56475945,56475624,56475044,56474846,56474544,56473463,56473228,56472690,56472119,56471773,56470952	56488397,56480387,56479901,56479181,56478262,56478096,56477718,56475977,56475682,56475110,56474896,56474720,56473594,56473320,56472751,56472195,56471836,56471643	Gene ID= ENSG00000135423.12 TPM= 4.67 Transcript Type= protein_coding
chr12	56569892	56589595	56569892	56589595	+	transcript3504.chr12.nic@RBMS2	transcript3504.chr12.nic	protein_coding	56569892,56571698,56581184,56581399,56581833,56582059,56586849,56587554,56588294,56588932,56589140	56569990,56571855,56581263,56581508,56581879,56582152,56586926,56587664,56588374,56589018,56589595	Gene ID= ENSG00000076067.12 TPM= 3.5 Transcript Type= NA
chr12	56521929	56596196	56521929	56596196	+	ENST00000262031.9@RBMS2	ENST00000262031.9	protein_coding	56521929,56562417,56568975,56569899,56571698,56581184,56581399,56581833,56582059,56586849,56587554,56588294,56588932,56589140	56522089,56562583,56569033,56569990,56571855,56581263,56581508,56581879,56582152,56586926,56587664,56588374,56589018,56596196	Gene ID= ENSG00000076067.12 TPM= 30.36 Transcript Type= protein_coding
chr12	56595930	56636379	56595930	56636379	-	ENST00000551812.5@BAZ2A	ENST00000551812.5	protein_coding	56636182,56617395,56615014,56613953,56613015,56611773,56611573,56610409,56610114,56609736,56606633,56606247,56605830,56605073,56604585,56604217,56603520,56603359,56602713,56601546,56601180,56600943,56600681,56600201,56599964,56599702,56599129,56598868,56595930	56636379,56617532,56615607,56614138,56613233,56612246,56611633,56610517,56610215,56609946,56606733,56606312,56606063,56605327,56604799,56604291,56603700,56603418,56602857,56602192,56601402,56601098,56600832,56600490,56600096,56599848,56599358,56599011,56598783	Gene ID= ENSG00000076108.11 TPM= 47.29 Transcript Type= protein_coding
chr12	56598369	56630211	56598369	56630211	-	ENST00000549884.5@BAZ2A	ENST00000549884.5	protein_coding	56630125,56617395,56615014,56613953,56613015,56611773,56611573,56610409,56610114,56609736,56606633,56606247,56605830,56605073,56604585,56604217,56603520,56603359,56602713,56601546,56601180,56600943,56600681,56600201,56599964,56599702,56599129,56598868,56598369	56630211,56617532,56615607,56614138,56613233,56612246,56611633,56610517,56610215,56609946,56606733,56606312,56606063,56605327,56604799,56604291,56603700,56603418,56602857,56602192,56601402,56601098,56600832,56600490,56600096,56599848,56599358,56599011,56598783	Gene ID= ENSG00000076108.11 TPM= 14.59 Transcript Type= protein_coding
chr12	56638179	56646068	56638179	56646068	-	ENST00000262030.7@ATP5B	ENST00000262030.7	protein_coding	56645837,56645171,56644781,56643837,56643403,56642673,56642458,56639980,56639106,56638179	56646068,56645353,56644955,56643958,56643587,56642831,56642580,56640192,56639307,56638423	Gene ID= ENSG00000110955.8 TPM= 269.95 Transcript Type= protein_coding
chr12	56663343	56688300	56663343	56688300	-	ENST00000262033.10@PTGES3	ENST00000262033.10	protein_coding	56687998,56672952,56672740,56671749,56670275,56666204,56664776,56663343	56688300,56673065,56672809,56671847,56670364,56666266,56664800,56664498	Gene ID= ENSG00000110958.15 TPM= 190.9 Transcript Type= protein_coding
chr12	56663613	56688287	56663613	56688287	-	ENST00000414274.7@PTGES3	ENST00000414274.7	protein_coding	56687998,56672952,56672740,56671749,56666204,56664776,56663613	56688287,56673065,56672809,56671847,56666266,56664800,56664498	Gene ID= ENSG00000110958.15 TPM= 11.68 Transcript Type= protein_coding
chr12	56712433	56727197	56712433	56727197	-	ENST00000356769.7@NACA	ENST00000356769.7	protein_coding	56725263,56724452,56714602,56714362,56713537,56713062,56712786,56712433	56727197,56724523,56714687,56714439,56713683,56713190,56712908,56712552	Gene ID= ENSG00000196531.10 TPM= 399.32 Transcript Type= protein_coding
chr12	56712435	56725267	56712435	56725267	-	ENST00000393891.8@NACA	ENST00000393891.8	protein_coding	56724962,56724452,56714602,56714362,56713537,56713062,56712786,56712435	56725267,56724523,56714687,56714439,56713683,56713190,56712908,56712552	Gene ID= ENSG00000196531.10 TPM= 59.55 Transcript Type= protein_coding
chr12	56731596	56752373	56731596	56752373	-	ENST00000552590.6@PRIM1	ENST00000552590.6	protein_coding	56752196,56751038,56746926,56746777,56746045,56744065,56742987,56741746,56741435,56739294,56738434,56734147,56731596	56752373,56751195,56747032,56746854,56746179,56744123,56743096,56741837,56741576,56739363,56738525,56734245,56731734	Gene ID= ENSG00000198056.13 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr12	56731622	56752335	56731622	56752335	-	ENST00000338193.10@PRIM1	ENST00000338193.10	protein_coding	56752196,56751038,56746926,56746781,56746045,56744065,56742987,56741746,56741435,56739294,56738434,56734147,56731622	56752335,56751195,56747032,56746854,56746181,56744123,56743096,56741837,56741576,56739363,56738525,56734245,56731734	Gene ID= ENSG00000198056.13 TPM= 1.17 Transcript Type= protein_coding
chr12	56763284	56787783	56763284	56787783	+	transcript3561.chr12.nic@HSD17B6	transcript3561.chr12.nic	protein_coding	56763284,56773834,56781974,56784853,56785902,56787125	56763414,56774165,56782232,56785016,56786014,56787783	Gene ID= ENSG00000025423.11 TPM= 3.5 Transcript Type= NA
chr12	56752449	56787790	56752449	56787790	+	ENST00000554643.5@HSD17B6	ENST00000554643.5	protein_coding	56752449,56763218,56773834,56781974,56784853,56787125	56752581,56763414,56774165,56782232,56785016,56787790	Gene ID= ENSG00000025423.11 TPM= 68.89 Transcript Type= protein_coding
chr12	56994446	56998441	56994446	56998441	+	ENST00000300098.2@GPR182	ENST00000300098.2	protein_coding	56994446,56995194	56994648,56998441	Gene ID= ENSG00000166856.2 TPM= 1.17 Transcript Type= protein_coding
chr12	56998834	57006446	56998834	57006446	-	ENST00000300101.2@ZBTB39	ENST00000300101.2	protein_coding	57006405,56998834	57006446,57004961	Gene ID= ENSG00000166860.2 TPM= 9.34 Transcript Type= protein_coding
chr12	57068354	57078768	57068354	57078768	-	transcript3576.chr12.nic@NEMP1	transcript3576.chr12.nic	protein_coding	57078619,57072788,57068354	57078768,57072912,57070893	Gene ID= ENSG00000166881.9 TPM= 2.34 Transcript Type= NA
chr12	57055648	57078769	57055648	57078769	-	ENST00000300128.8@NEMP1	ENST00000300128.8	protein_coding	57078619,57072788,57070674,57069234,57064646,57064071,57063119,57060772,57055648	57078769,57072912,57070893,57069306,57064739,57064185,57063344,57060945,57060059	Gene ID= ENSG00000166881.9 TPM= 5.84 Transcript Type= protein_coding
chr12	57055643	57078763	57055643	57078763	-	ENST00000379391.7@NEMP1	ENST00000379391.7	protein_coding	57078619,57072788,57070820,57064646,57064071,57063119,57060772,57055643	57078763,57072912,57070893,57064739,57064185,57063344,57060945,57060059	Gene ID= ENSG00000166881.9 TPM= 3.5 Transcript Type= protein_coding
chr12	57088894	57095476	57088894	57095476	+	ENST00000300131.7@NAB2	ENST00000300131.7	protein_coding	57088894,57091125,57092448,57092917,57093063,57093407,57094612	57089354,57091998,57092581,57092968,57093195,57093598,57095476	Gene ID= ENSG00000166886.12 TPM= 38.53 Transcript Type= protein_coding
chr12	57095408	57111433	57095408	57111433	-	ENST00000300134.7@STAT6	ENST00000300134.7	protein_coding	57111129,57108163,57107605,57107231,57106693,57106528,57106191,57105468,57105151,57104726,57104464,57102829,57102290,57099996,57099767,57099294,57099015,57098792,57098505,57097068,57096850,57095408	57111433,57108299,57107743,57107314,57106831,57106580,57106339,57105599,57105339,57104813,57104586,57102921,57102496,57100090,57099903,57099440,57099078,57098902,57098597,57097133,57096978,57096761	Gene ID= ENSG00000166888.11 TPM= 99.93 Transcript Type= protein_coding
chr12	57102985	57111414	57102985	57111414	-	transcript3601.chr12.nic@STAT6	transcript3601.chr12.nic	protein_coding	57111129,57108163,57107605,57107231,57106693,57106528,57106191,57105468,57105151,57104726,57102985	57111414,57108299,57107743,57107314,57106831,57106580,57106339,57105599,57105339,57104813,57104586	Gene ID= ENSG00000166888.11 TPM= 15.32 Transcript Type= NA
chr12	57102985	57111413	57102985	57111413	-	transcript3602.chr12.nic@STAT6	transcript3602.chr12.nic	protein_coding	57111129,57108163,57107605,57107231,57106693,57106528,57105468,57105151,57104726,57102985	57111413,57108299,57107743,57107314,57106831,57106580,57106339,57105339,57104813,57104586	Gene ID= ENSG00000166888.11 TPM= 19.41 Transcript Type= NA
chr12	57128499	57213351	57128499	57213351	+	ENST00000243077.7@LRP1	ENST00000243077.7	protein_coding	57128499,57138459,57141374,57143679,57144972,57145227,57154208,57154479,57156094,57156777,57158402,57159825,57160893,57162317,57162858,57165805,57166084,57166930,57167444,57169140,57173168,57173780,57175460,57175909,57177041,57177427,57178359,57178890,57179329,57179782,57180047,57180330,57180667,57181157,57183379,57183775,57184085,57184326,57184839,57185081,57185531,57187267,57190805,57191320,57192845,57193176,57193566,57193899,57194354,57194577,57194985,57195271,57195658,57195863,57196087,57196982,57197299,57197545,57198156,57198465,57199212,57199877,57200442,57200699,57201034,57201497,57201780,57202421,57203181,57203389,57204410,57204627,57205109,57205351,57205558,57206473,57208038,57208711,57209083,57209692,57210029,57210307,57210718,57211176,57211487,57211750,57211927,57212117,57212415	57129031,57138581,57141511,57143798,57145100,57145490,57154370,57154701,57156283,57156920,57158638,57160005,57161115,57162518,57162983,57165945,57166209,57167046,57167524,57169307,57173350,57173980,57175705,57176106,57177245,57177591,57178603,57179021,57179556,57179956,57180141,57180479,57180807,57181291,57183510,57183909,57184214,57184452,57184990,57185205,57185908,57187456,57191009,57191512,57192970,57193304,57193685,57194012,57194503,57194699,57195101,57195399,57195780,57196003,57196277,57197165,57197384,57197664,57198343,57198670,57199400,57200025,57200535,57200815,57201153,57201619,57201905,57202537,57203287,57203521,57204529,57204749,57205249,57205485,57205677,57206741,57208216,57208817,57209199,57209868,57210169,57210480,57210879,57211350,57211588,57211814,57212017,57212261,57213351	Gene ID= ENSG00000123384.13 TPM= 256.87 Transcript Type= protein_coding
chr12	57229327	57234931	57229327	57234931	+	ENST00000328923.7@SHMT2	ENST00000328923.7	protein_coding	57229327,57230803,57231481,57231713,57232211,57232453,57232704,57233180,57233563,57233749,57234003,57234234	57229811,57231000,57231560,57231913,57232292,57232575,57232843,57233345,57233662,57233904,57234110,57234931	Gene ID= ENSG00000182199.10 TPM= 16.93 Transcript Type= protein_coding
chr12	57230086	57234726	57230086	57234726	+	ENST00000414700.7@SHMT2	ENST00000414700.7	protein_coding	57230086,57230803,57231481,57231713,57232211,57232453,57232704,57233180,57233563,57233749,57234003,57234234	57230244,57231000,57231560,57231913,57232292,57232575,57232843,57233345,57233662,57233904,57234110,57234726	Gene ID= ENSG00000182199.10 TPM= 20.43 Transcript Type= protein_coding
chr12	57229573	57234935	57229573	57234935	+	ENST00000556825.5@SHMT2	ENST00000556825.5	protein_coding	57229573,57230803,57231713,57232211,57232453,57232704,57233180,57233563,57233749,57234003,57234234	57229811,57231000,57231913,57232292,57232575,57232843,57233345,57233662,57233904,57234110,57234935	Gene ID= ENSG00000182199.10 TPM= 5.25 Transcript Type= nonsense_mediated_decay
chr12	57229711	57234726	57229711	57234726	+	ENST00000557487.5@SHMT2	ENST00000557487.5	protein_coding	57229711,57230803,57231481,57231713,57232211,57232483,57232704,57233180,57233563,57233749,57234003,57234234	57229811,57231000,57231560,57231913,57232292,57232575,57232843,57233345,57233662,57233904,57234110,57234726	Gene ID= ENSG00000182199.10 TPM= 7.59 Transcript Type= protein_coding
chr12	57234905	57240692	57234905	57240692	-	ENST00000393825.5@NDUFA4L2	ENST00000393825.5	protein_coding	57240679,57237029,57236593,57235749,57234905	57240692,57237335,57236681,57235809,57235619	Gene ID= ENSG00000185633.10 TPM= 29.19 Transcript Type= protein_coding
chr12	57253764	57430809	57253764	57430809	-	transcript3632.chr12.nic@R3HDM2	transcript3632.chr12.nic	protein_coding	57430720,57395749,57310264,57305640,57303176,57300095,57299352,57298090,57297328,57296411,57295399,57292572,57289009,57283824,57280358,57269752,57269323,57268922,57268303,57266731,57258890,57257990,57256414,57255990,57253764	57430809,57395818,57310463,57305663,57303217,57300181,57299478,57298168,57297387,57296551,57295507,57292667,57289040,57284056,57280530,57269994,57269449,57269082,57268457,57266831,57259059,57258137,57256511,57256074,57255113	Gene ID= ENSG00000179912.20 TPM= 18.77 Transcript Type= NA
chr12	57253764	57431006	57253764	57431006	-	transcript3634.chr12.nnic@R3HDM2	transcript3634.chr12.nnic	protein_coding	57430720,57422859,57395749,57310264,57305640,57303176,57300095,57299352,57298090,57297328,57296411,57295399,57289009,57283824,57280358,57269752,57269323,57268922,57268303,57266731,57258890,57257990,57256414,57255990,57253764	57431006,57422959,57395818,57310463,57305663,57303217,57300181,57299478,57298168,57297387,57296551,57295507,57289040,57284056,57280530,57269994,57269449,57269082,57268457,57266831,57259059,57258137,57256511,57256074,57255113	Gene ID= ENSG00000179912.20 TPM= 13.52 Transcript Type= NA
chr12	57253765	57431005	57253765	57431005	-	ENST00000402412.5@R3HDM2	ENST00000402412.5	protein_coding	57430720,57395749,57310264,57303176,57300095,57299352,57298090,57297328,57296411,57295399,57292572,57289009,57283824,57280358,57269752,57269323,57268922,57268303,57266731,57258890,57257990,57256414,57255990,57253765	57431005,57395818,57310463,57303217,57300181,57299478,57298168,57297387,57296551,57295507,57292667,57289040,57284056,57280530,57269994,57269449,57269082,57268457,57266831,57259059,57258137,57256511,57256074,57255113	Gene ID= ENSG00000179912.20 TPM= 38.04 Transcript Type= protein_coding
chr12	57321876	57430859	57321876	57430859	-	transcript3698.chr12.nnic@R3HDM2	transcript3698.chr12.nnic	protein_coding	57430720,57395749,57321876	57430859,57395818,57322212	Gene ID= ENSG00000179912.20 TPM= 2.34 Transcript Type= NA
chr12	57253776	57430808	57253776	57430808	-	ENST00000634871.1@R3HDM2	ENST00000634871.1	protein_coding	57430720,57395749,57310264,57305640,57303176,57300095,57299352,57298090,57297328,57296411,57295399,57289009,57283824,57280358,57269752,57269323,57268922,57268303,57266731,57258890,57257990,57256414,57255990,57253776	57430808,57395818,57310463,57305663,57303217,57300181,57299478,57298168,57297387,57296551,57295507,57289040,57284056,57280530,57269994,57269449,57269082,57268457,57266831,57259059,57258137,57256511,57256074,57255113	Gene ID= ENSG00000179912.20 TPM= 11.38 Transcript Type= protein_coding
chr12	57412781	57413448	57412781	57413448	+	transcript3703.chr12.nnic@NA	transcript3703.chr12.nnic	NA	57412781	57413448	Gene ID= novel_gene_chr12_3704 TPM= 2.34 Transcript Type= NA
chr12	57472270	57477887	57472270	57477887	-	transcript3679.chr12.nic@ARHGAP9	transcript3679.chr12.nic	protein_coding	57477785,57477459,57477156,57476871,57476590,57476364,57476071,57475776,57475483,57475291,57474875,57474626,57474423,57474042,57473603,57472270	57477887,57477680,57477269,57476963,57476651,57476454,57476166,57475931,57475615,57475398,57474973,57474703,57474476,57474176,57473708,57472688	Gene ID= ENSG00000123329.17 TPM= 7.3 Transcript Type= NA
chr12	57472270	57478198	57472270	57478198	-	ENST00000430041.6@ARHGAP9	ENST00000430041.6	protein_coding	57477785,57477459,57477156,57476871,57476590,57476364,57476071,57475833,57475483,57475291,57474875,57474626,57474423,57474042,57473603,57472270	57478198,57477680,57477269,57476963,57476651,57476454,57476166,57475931,57475615,57475398,57474973,57474703,57474476,57474176,57473708,57472688	Gene ID= ENSG00000123329.17 TPM= 23.06 Transcript Type= protein_coding
chr12	57472264	57477867	57472264	57477867	-	transcript3683.chr12.nic@ARHGAP9	transcript3683.chr12.nic	protein_coding	57477785,57477459,57477156,57476871,57476590,57476364,57476071,57475833,57475483,57475291,57474875,57474626,57474423,57474042,57472264	57477867,57477680,57477269,57476963,57476651,57476454,57476166,57475931,57475615,57475398,57474973,57474703,57474476,57474176,57472688	Gene ID= ENSG00000123329.17 TPM= 7.3 Transcript Type= NA
chr12	57472270	57477886	57472270	57477886	-	transcript3685.chr12.nic@ARHGAP9	transcript3685.chr12.nic	protein_coding	57477785,57477459,57477156,57476590,57476364,57476071,57475833,57475483,57475291,57474875,57474626,57474423,57474042,57473603,57472270	57477886,57477680,57477269,57476963,57476454,57476166,57475931,57475615,57475398,57474973,57474703,57474476,57474176,57473708,57472688	Gene ID= ENSG00000123329.17 TPM= 10.22 Transcript Type= NA
chr12	57487957	57516649	57487957	57516649	+	ENST00000262027.9@MARS	ENST00000262027.9	protein_coding	57487957,57489019,57489267,57489424,57489896,57490207,57490538,57498157,57498420,57500321,57504225,57511698,57512008,57512236,57512751,57514720,57514954,57515150,57515920,57516245,57516435	57488199,57489109,57489345,57489558,57489971,57490379,57490644,57498273,57498623,57500522,57504299,57511868,57512103,57512353,57512964,57514851,57515058,57515336,57515991,57516337,57516649	Gene ID= ENSG00000166986.14 TPM= 198.27 Transcript Type= protein_coding
chr12	57487990	57516649	57487990	57516649	+	transcript3659.chr12.nic@MARS	transcript3659.chr12.nic	protein_coding	57487990,57489019,57489267,57489424,57489896,57490207,57490538,57498157,57498420,57500321,57504225,57511698,57512008,57512236,57512751,57514720,57514954,57515150,57515920,57516435	57488199,57489109,57489345,57489558,57489971,57490379,57490644,57498273,57498623,57500522,57504299,57511868,57512103,57512353,57512964,57514851,57515058,57515336,57516337,57516649	Gene ID= ENSG00000166986.14 TPM= 13.01 Transcript Type= NA
chr12	57488056	57516649	57488056	57516649	+	transcript3660.chr12.nic@MARS	transcript3660.chr12.nic	protein_coding	57488056,57489019,57489267,57489424,57489896,57490207,57490538,57498157,57498420,57500321,57504225,57511698,57512008,57512303,57512751,57514720,57514954,57515150,57515920,57516435	57488199,57489109,57489345,57489558,57489971,57490379,57490644,57498273,57498623,57500522,57504299,57511868,57512103,57512353,57512964,57514851,57515058,57515336,57516337,57516649	Gene ID= ENSG00000166986.14 TPM= 7.17 Transcript Type= NA
chr12	57487990	57516649	57487990	57516649	+	transcript3666.chr12.nic@MARS	transcript3666.chr12.nic	protein_coding	57487990,57489019,57489267,57489424,57489896,57490207,57490538,57498157,57498420,57500321,57504225,57511698,57512008,57512751,57514720,57514954,57515150,57515920,57516435	57488199,57489109,57489345,57489558,57489971,57490379,57490644,57498273,57498623,57500522,57504299,57511868,57512353,57512964,57514851,57515058,57515336,57516337,57516649	Gene ID= ENSG00000166986.14 TPM= 6 Transcript Type= NA
chr12	57504712	57507343	57504712	57507343	-	transcript3705.chr12.nnic@NA	transcript3705.chr12.nnic	NA	57504712	57507343	Gene ID= novel_gene_chr12_3706 TPM= 2.34 Transcript Type= NA
chr12	57516593	57520517	57516593	57520517	-	ENST00000346473.7@DDIT3	ENST00000346473.7	protein_coding	57520418,57517706,57517269,57516593	57520517,57517753,57517438,57517180	Gene ID= ENSG00000175197.11 TPM= 39.11 Transcript Type= protein_coding
chr12	57516591	57520517	57516591	57520517	-	transcript3702.chr12.nic@DDIT3	transcript3702.chr12.nic	protein_coding	57520418,57516591	57520517,57517753	Gene ID= ENSG00000175197.11 TPM= 7.59 Transcript Type= NA
chr12	57530102	57547331	57530102	57547331	-	ENST00000548249.5@DCTN2	ENST00000548249.5	protein_coding	57547028,57546028,57535749,57535484,57535056,57534292,57533953,57533238,57532984,57532733,57532572,57532213,57532015,57530102	57547331,57546096,57535845,57535545,57535154,57534452,57534097,57533303,57533022,57532810,57532643,57532315,57532106,57530775	Gene ID= ENSG00000175203.15 TPM= 42.03 Transcript Type= protein_coding
chr12	57591193	57603418	57591193	57603418	+	transcript3728.chr12.nic@PIP4K2C	transcript3728.chr12.nic	protein_coding	57591193,57594025,57595126,57595888,57597958,57599065,57599400,57600324,57601245,57601526	57591463,57594122,57595222,57596031,57598062,57599211,57599438,57601078,57601348,57603418	Gene ID= ENSG00000166908.17 TPM= 2.92 Transcript Type= NA
chr12	57591215	57603418	57591215	57603418	+	transcript3732.chr12.nic@PIP4K2C	transcript3732.chr12.nic	protein_coding	57591215,57594025,57595126,57595888,57599065,57600324,57600811,57601245,57601526	57591463,57594122,57595222,57596031,57599211,57600437,57601078,57601348,57603418	Gene ID= ENSG00000166908.17 TPM= 2.92 Transcript Type= NA
chr12	57591274	57603248	57591274	57603248	+	ENST00000354947.9@PIP4K2C	ENST00000354947.9	protein_coding	57591274,57594025,57595126,57595888,57599065,57599400,57600324,57600811,57601245,57601526	57591463,57594122,57595222,57596031,57599211,57599438,57600437,57601078,57601348,57603248	Gene ID= ENSG00000166908.17 TPM= 8.17 Transcript Type= protein_coding
chr12	57604818	57609800	57604818	57609800	+	transcript3737.chr12.nic@DTX3	transcript3737.chr12.nic	protein_coding	57604818,57605571,57606190,57606443,57606884,57608520,57609077	57604858,57605731,57606252,57606518,57607613,57608737,57609800	Gene ID= ENSG00000178498.15 TPM= 4.67 Transcript Type= NA
chr12	57604622	57609800	57604622	57609800	+	ENST00000548804.5@DTX3	ENST00000548804.5	protein_coding	57604622,57606190,57606443,57606865,57608520,57609077	57604858,57606252,57606518,57607613,57608737,57609800	Gene ID= ENSG00000178498.15 TPM= 5.84 Transcript Type= protein_coding
chr12	57604821	57609800	57604821	57609800	+	ENST00000337737.7@DTX3	ENST00000337737.7	protein_coding	57604821,57605571,57606190,57606443,57606865,57608520,57609077	57604858,57605731,57606252,57606518,57607613,57608737,57609800	Gene ID= ENSG00000178498.15 TPM= 9.34 Transcript Type= protein_coding
chr12	57629329	57633202	57629329	57633202	-	ENST00000550764.5@B4GALNT1	ENST00000550764.5	protein_coding	57632772,57631915,57631200,57630980,57630478,57629329	57633202,57632133,57631364,57631086,57630518,57630332	Gene ID= ENSG00000135454.13 TPM= 2.34 Transcript Type= protein_coding
chr12	57693955	57720998	57693955	57720998	+	ENST00000552285.5@OS9	ENST00000552285.5	protein_coding	57693955,57694750,57695780,57695962,57696275,57715760,57716092,57716412,57716693,57717870,57718146,57718993,57720406,57720784	57694323,57694926,57695843,57696038,57696373,57715970,57716193,57716512,57716744,57717958,57718421,57719182,57720518,57720998	Gene ID= ENSG00000135506.15 TPM= 1.17 Transcript Type= protein_coding
chr12	57694121	57721555	57694121	57721555	+	ENST00000315970.11@OS9	ENST00000315970.11	protein_coding	57694121,57694750,57695780,57695962,57696275,57715760,57716092,57716412,57716693,57717870,57718146,57718993,57720099,57720406,57720784	57694323,57694926,57695843,57696038,57696373,57715970,57716193,57716512,57716744,57717958,57718421,57719182,57720263,57720518,57721555	Gene ID= ENSG00000135506.15 TPM= 440.05 Transcript Type= protein_coding
chr12	57694145	57721555	57694145	57721555	+	ENST00000257966.12@OS9	ENST00000257966.12	protein_coding	57694145,57694750,57695780,57695962,57696275,57715760,57716089,57716412,57716693,57717870,57718146,57718993,57720406,57720784	57694323,57694926,57695843,57696038,57696373,57715970,57716193,57716512,57716744,57717958,57718421,57719182,57720518,57721555	Gene ID= ENSG00000135506.15 TPM= 255.67 Transcript Type= protein_coding
chr12	57694147	57721557	57694147	57721557	+	ENST00000389142.9@OS9	ENST00000389142.9	protein_coding	57694147,57694750,57695780,57695962,57696275,57715760,57716092,57716412,57716693,57717870,57718146,57718993,57720406,57720784	57694323,57694926,57695843,57696038,57696373,57715970,57716193,57716512,57716744,57717958,57718376,57719182,57720518,57721557	Gene ID= ENSG00000135506.15 TPM= 23.2 Transcript Type= protein_coding
chr12	57726271	57728356	57726271	57728356	+	ENST00000542466.2@AGAP2-AS1	ENST00000542466.2	antisense_RNA	57726271,57726965	57726378,57728356	Gene ID= ENSG00000255737.2 TPM= 17.51 Transcript Type= antisense_RNA
chr12	57744881	57748232	57744881	57748232	+	ENST00000257910.7@TSPAN31	ENST00000257910.7	protein_coding	57744881,57745745,57746176,57746589,57747018,57747216	57745217,57745912,57746256,57746720,57747131,57748232	Gene ID= ENSG00000135452.9 TPM= 89.32 Transcript Type= protein_coding
chr12	57745955	57748233	57745955	57748233	+	transcript3813.chr12.nnic@NA	transcript3813.chr12.nnic	NA	57745955	57748233	Gene ID= novel_gene_chr12_3814 TPM= 5.25 Transcript Type= NA
chr12	57747727	57752521	57747727	57752521	-	ENST00000257904.10@CDK4	ENST00000257904.10	protein_coding	57752175,57751500,57751207,57750923,57750656,57749454,57749182,57747727	57752521,57751736,57751342,57751090,57750765,57749504,57749317,57748617	Gene ID= ENSG00000135446.16 TPM= 155.29 Transcript Type= protein_coding
chr12	57755098	57760407	57755098	57760407	+	ENST00000266643.5@MARCH9	ENST00000266643.5	protein_coding	57755098,57756929,57758108,57758563	57755885,57757084,57758300,57760407	Gene ID= ENSG00000139266.5 TPM= 2.34 Transcript Type= protein_coding
chr12	57757487	57759416	57757487	57759416	+	ENST00000548358.1@MARCH9	ENST00000548358.1	protein_coding	57757487,57758563	57758300,57759416	Gene ID= ENSG00000139266.5 TPM= 2.34 Transcript Type= protein_coding
chr12	57768471	57772793	57768471	57772793	-	ENST00000324871.11@METTL1	ENST00000324871.11	protein_coding	57771974,57771094,57769772,57769565,57769303,57768471	57772793,57771257,57769956,57769678,57769404,57769151	Gene ID= ENSG00000037897.16 TPM= 5.84 Transcript Type= protein_coding
chr12	57772593	57782541	57772593	57782541	+	transcript3841.chr12.nnic@EEF1AKMT3	transcript3841.chr12.nnic	protein_coding	57772593,57773017,57780255	57772901,57773073,57782541	Gene ID= ENSG00000123427.16 TPM= 2.34 Transcript Type= NA
chr12	57772678	57782541	57772678	57782541	+	ENST00000333012.5@EEF1AKMT3	ENST00000333012.5	protein_coding	57772678,57773017,57774629,57780255	57772901,57773128,57774767,57782541	Gene ID= ENSG00000123427.16 TPM= 4.67 Transcript Type= protein_coding
chr12	57778295	57779228	57778295	57779228	-	transcript3844.chr12.nnic@NA	transcript3844.chr12.nnic	NA	57778295	57779228	Gene ID= novel_gene_chr12_3845 TPM= 3.5 Transcript Type= NA
chr12	57782589	57797584	57782589	57797584	+	ENST00000454289.7@TSFM	ENST00000454289.7	protein_coding	57782589,57783110,57786163,57787040,57792986,57796177	57782858,57783283,57786291,57787162,57793073,57797584	Gene ID= ENSG00000123297.17 TPM= 21.02 Transcript Type= protein_coding
chr12	57782761	57797587	57782761	57797587	+	ENST00000540550.6@TSFM	ENST00000540550.6	protein_coding	57782761,57783110,57786163,57787040,57796177	57782858,57783283,57786291,57787162,57797587	Gene ID= ENSG00000123297.17 TPM= 2.34 Transcript Type= protein_coding
chr12	57819927	57846726	57819927	57846726	-	transcript3849.chr12.nic@CTDSP2	transcript3849.chr12.nic	protein_coding	57846372,57829448,57827552,57826996,57826346,57824227,57823904,57819927	57846726,57829596,57827590,57827097,57826402,57824319,57824005,57823727	Gene ID= ENSG00000175215.10 TPM= 7.01 Transcript Type= NA
chr12	57819927	57846708	57819927	57846708	-	transcript3850.chr12.nic@CTDSP2	transcript3850.chr12.nic	protein_coding	57846372,57829448,57827534,57826996,57826346,57824227,57823904,57819927	57846708,57829596,57827590,57827097,57826402,57824319,57824089,57823727	Gene ID= ENSG00000175215.10 TPM= 7.01 Transcript Type= NA
chr12	57819927	57846739	57819927	57846739	-	ENST00000398073.6@CTDSP2	ENST00000398073.6	protein_coding	57846372,57829448,57827552,57826996,57826346,57824227,57823904,57819927	57846739,57829596,57827590,57827097,57826402,57824319,57824089,57823727	Gene ID= ENSG00000175215.10 TPM= 235.85 Transcript Type= protein_coding
chr12	58872149	58920522	58872149	58920522	-	ENST00000320743.7@LRIG3	ENST00000320743.7	protein_coding	58920000,58914265,58913982,58890665,58889996,58888819,58888329,58887789,58886810,58885831,58883520,58882869,58880581,58878824,58877400,58876445,58874430,58874055,58872149	58920522,58914336,58914056,58890796,58890139,58888962,58888472,58887932,58886890,58885902,58883591,58883032,58880901,58879105,58877852,58876603,58874573,58874330,58872816	Gene ID= ENSG00000139263.11 TPM= 40.87 Transcript Type= protein_coding
chr12	62260404	62404643	62260404	62404643	+	transcript3898.chr12.nic@USP15	transcript3898.chr12.nic	protein_coding	62260404,62294179,62302790,62314790,62321464,62325872,62349221,62355331,62381490,62383840,62384078,62389431,62389605,62389797,62390864,62391157,62393053,62396295,62401187,62404193	62260503,62294306,62302920,62314916,62321609,62325933,62349307,62355475,62381663,62383998,62384302,62389514,62389699,62389988,62390979,62392387,62393202,62396398,62401275,62404643	Gene ID= ENSG00000135655.15 TPM= 2.34 Transcript Type= NA
chr12	62260404	62404643	62260404	62404643	+	transcript3899.chr12.nnic@USP15	transcript3899.chr12.nnic	protein_coding	62260404,62294179,62302790,62314790,62321464,62325872,62355331,62381490,62383840,62384078,62389431,62389605,62389783,62390864,62391157,62393053,62396295,62401187,62404193	62260503,62294306,62302920,62314916,62321609,62325933,62355475,62381663,62383998,62384302,62389514,62389699,62389988,62390979,62392387,62393202,62396398,62401275,62404643	Gene ID= ENSG00000135655.15 TPM= 2.34 Transcript Type= NA
chr12	62260357	62406119	62260357	62406119	+	ENST00000280377.9@USP15	ENST00000280377.9	protein_coding	62260357,62294179,62302790,62314790,62321464,62325872,62349221,62355331,62381490,62383840,62384078,62389431,62389605,62389797,62390864,62391157,62391816,62392272,62393053,62396295,62401187,62404193	62260503,62294306,62302920,62314916,62321609,62325933,62349307,62355475,62381663,62383998,62384302,62389514,62389699,62389988,62390979,62391429,62391886,62392387,62393202,62396398,62401275,62406119	Gene ID= ENSG00000135655.15 TPM= 15.18 Transcript Type= protein_coding
chr12	62260397	62336690	62260397	62336690	+	ENST00000312635.10@USP15	ENST00000312635.10	protein_coding	62260397,62294179,62302790,62314790,62321464,62325872,62335166	62260503,62294306,62302920,62314916,62321609,62325933,62336690	Gene ID= ENSG00000135655.15 TPM= 3.5 Transcript Type= protein_coding
chr12	62466801	62559795	62466801	62559795	+	transcript3919.chr12.nic@MON2	transcript3919.chr12.nic	protein_coding	62466801,62484170,62493915,62495016,62498919,62500783,62501573,62508286,62524515,62525084,62525949,62532438,62534845,62535525,62537151,62537602,62538096,62538252,62538415,62543097,62544898,62546897,62549668,62552881,62555994	62467318,62484233,62494042,62495147,62499048,62500880,62501698,62508480,62524639,62525220,62526102,62532670,62534926,62535709,62537263,62537706,62538176,62538325,62538505,62543198,62545008,62547072,62549830,62553174,62559795	Gene ID= ENSG00000061987.15 TPM= 5.84 Transcript Type= NA
chr12	62466801	62502421	62466801	62502421	+	transcript3921.chr12.nic@MON2	transcript3921.chr12.nic	protein_coding	62466801,62484170,62493915,62495016,62498919,62500783,62501573	62467318,62484233,62494042,62495147,62499048,62500880,62502421	Gene ID= ENSG00000061987.15 TPM= 3.5 Transcript Type= NA
chr12	62601751	62603690	62601751	62603690	-	ENST00000408887.3@LINC01465	ENST00000408887.3	lincRNA	62601751	62603690	Gene ID= ENSG00000221949.5 TPM= 2.34 Transcript Type= lincRNA
chr12	62965325	62965969	62965325	62965969	+	ENST00000484568.1@AC078814.1	ENST00000484568.1	processed_pseudogene	62965325	62965969	Gene ID= ENSG00000139239.7 TPM= 4.67 Transcript Type= processed_pseudogene
chr12	63779843	63809100	63779843	63809100	+	transcript3930.chr12.nnic@TMEM5	transcript3930.chr12.nnic	protein_coding	63779843,63781019,63784970,63789888,63802091,63805234,63808675	63780129,63781174,63785072,63789931,63802405,63805404,63809100	Gene ID= ENSG00000118600.11 TPM= 2.34 Transcript Type= NA
chr12	63780114	63809100	63780114	63809100	+	transcript3932.chr12.nic@TMEM5	transcript3932.chr12.nic	protein_coding	63780114,63781019,63782541,63784970,63802091,63805234,63808675	63780462,63781174,63782704,63785072,63802405,63805404,63809100	Gene ID= ENSG00000118600.11 TPM= 5.84 Transcript Type= NA
chr12	63779803	63809520	63779803	63809520	+	ENST00000261234.10@TMEM5	ENST00000261234.10	protein_coding	63779803,63781019,63784970,63802091,63805234,63808675	63780129,63781174,63785072,63802405,63805404,63809520	Gene ID= ENSG00000118600.11 TPM= 3.5 Transcript Type= protein_coding
chr12	63780126	63809558	63780126	63809558	+	ENST00000537373.5@TMEM5	ENST00000537373.5	protein_coding	63780126,63781019,63784970,63802091,63805234,63808675	63780462,63781174,63785072,63802405,63805404,63809558	Gene ID= ENSG00000118600.11 TPM= 1.17 Transcript Type= protein_coding
chr12	63843934	64042952	63843934	64042952	+	transcript3945.chr12.nic@SRGAP1	transcript3945.chr12.nic	protein_coding	63843934,63983947,63989910,64016950,64042790	63844883,63984142,63990072,64017012,64042952	Gene ID= ENSG00000196935.8 TPM= 4.67 Transcript Type= NA
chr12	64186316	64222265	64186316	64222265	-	ENST00000311915.12@C12orf66	ENST00000311915.12	protein_coding	64222003,64215678,64193847,64186316	64222265,64215963,64194658,64187652	Gene ID= ENSG00000174206.12 TPM= 3.5 Transcript Type= protein_coding
chr12	64404330	64448679	64404330	64448679	+	transcript3961.chr12.nnic@XPOT	transcript3961.chr12.nnic	protein_coding	64404330,64409962,64414907,64416698,64418876,64420070,64420353,64421235,64423005,64423182,64424599,64425038,64425338,64425815,64428051,64430049,64431538,64433414,64434507,64434794,64435627,64439244,64445075,64448105	64404804,64410095,64414989,64416754,64419094,64420254,64420521,64421471,64423043,64423244,64424723,64425182,64425457,64425909,64428120,64430287,64431823,64433603,64434623,64434909,64435674,64439315,64445131,64448679	Gene ID= ENSG00000184575.11 TPM= 5.06 Transcript Type= NA
chr12	64404350	64451127	64404350	64451127	+	ENST00000332707.9@XPOT	ENST00000332707.9	protein_coding	64404350,64409962,64414907,64416698,64418046,64418876,64420070,64420353,64421235,64423005,64423182,64424599,64425038,64425338,64425815,64428051,64430049,64431538,64433414,64434507,64434794,64435627,64439244,64445075,64448105	64404804,64410095,64414989,64416754,64418115,64419094,64420254,64420521,64421471,64423043,64423244,64424723,64425182,64425457,64425909,64428120,64430287,64431823,64433603,64434623,64434909,64435674,64439315,64445131,64451127	Gene ID= ENSG00000184575.11 TPM= 16.35 Transcript Type= protein_coding
chr12	64451880	64502108	64451880	64502108	+	ENST00000331710.9@TBK1	ENST00000331710.9	protein_coding	64451880,64455840,64460189,64464334,64466901,64474230,64480012,64481842,64484303,64485455,64485926,64488487,64490041,64495483,64495699,64496367,64496949,64497163,64497648,64497968,64501330	64452187,64455957,64460329,64464463,64467082,64474390,64480122,64482021,64484499,64485513,64486017,64488588,64490119,64495604,64495775,64496406,64497050,64497259,64497754,64498039,64502108	Gene ID= ENSG00000183735.9 TPM= 58.96 Transcript Type= protein_coding
chr12	64452120	64502108	64452120	64502108	+	transcript3968.chr12.nic@TBK1	transcript3968.chr12.nic	protein_coding	64452120,64455840,64460189,64464334,64466901,64474230,64480012,64481842,64485455,64485926,64488487,64490041,64495483,64495699,64496367,64496949,64497163,64497648,64497968,64501330	64452187,64455957,64460329,64464463,64467082,64474390,64480122,64484499,64485513,64486017,64488588,64490119,64495604,64495775,64496406,64497050,64497259,64497754,64498039,64502108	Gene ID= ENSG00000183735.9 TPM= 2.92 Transcript Type= NA
chr12	64452126	64497921	64452126	64497921	+	transcript3971.chr12.nic@TBK1	transcript3971.chr12.nic	protein_coding	64452126,64455840,64460189,64464334,64466901,64474230,64480012,64481842,64484303,64485455,64485926,64488487,64490041,64495483,64495699,64496367,64496949,64497163,64497648	64452187,64455957,64460329,64464463,64467082,64474390,64480122,64482021,64484499,64485513,64486017,64488588,64490119,64495604,64495775,64496406,64497050,64497259,64497921	Gene ID= ENSG00000183735.9 TPM= 2.34 Transcript Type= NA
chr12	64452138	64456855	64452138	64456855	+	transcript3973.chr12.nic@TBK1	transcript3973.chr12.nic	protein_coding	64452138,64455840	64452187,64456855	Gene ID= ENSG00000183735.9 TPM= 2.34 Transcript Type= NA
chr12	64610476	64697567	64610476	64697567	+	transcript3976.chr12.nnic@RASSF3	transcript3976.chr12.nnic	protein_coding	64610476,64684787,64688216,64691470,64694763	64610921,64684894,64688453,64691579,64697567	Gene ID= ENSG00000153179.12 TPM= 3.5 Transcript Type= NA
chr12	64610513	64697567	64610513	64697567	+	ENST00000542104.5@RASSF3	ENST00000542104.5	protein_coding	64610513,64684787,64688216,64691470,64694763	64610743,64684894,64688453,64691579,64697567	Gene ID= ENSG00000153179.12 TPM= 75.89 Transcript Type= protein_coding
chr12	64713449	64759447	64713449	64759447	-	ENST00000258145.7@GNS	ENST00000258145.7	protein_coding	64759085,64752698,64747712,64745659,64744809,64743141,64740606,64739381,64737004,64728956,64723006,64721595,64720022,64713449	64759447,64752757,64747918,64745724,64744907,64743308,64740688,64739499,64737107,64729057,64723113,64721705,64720182,64716819	Gene ID= ENSG00000135677.10 TPM= 169.3 Transcript Type= protein_coding
chr12	64780593	64876018	64780593	64876018	+	transcript3988.chr12.nnic@TBC1D30	transcript3988.chr12.nnic	protein_coding	64780593,64785881,64787360,64827835,64828444,64830377,64832119,64836490,64838683,64843380,64864668,64866764,64870602,64870981,64875001	64781286,64786045,64787381,64827896,64828509,64830502,64832304,64836658,64838851,64843485,64864780,64866903,64870808,64871040,64876018	Gene ID= ENSG00000111490.12 TPM= 2.34 Transcript Type= NA
chr12	64780535	64878633	64780535	64878633	+	transcript3991.chr12.nic@TBC1D30	transcript3991.chr12.nic	protein_coding	64780535,64785881,64787360,64827835,64828444,64830377,64832119,64836490,64838683,64843380,64864668,64866764,64870602,64875001	64781286,64786045,64787381,64827896,64828509,64830502,64832304,64836658,64838851,64843485,64864780,64866903,64870808,64878633	Gene ID= ENSG00000111490.12 TPM= 4.67 Transcript Type= NA
chr12	65050626	65121588	65050626	65121588	-	transcript4003.chr12.nic@WIF1	transcript4003.chr12.nic	protein_coding	65121044,65120417,65077746,65068764,65067695,65066641,65062481,65055118,65050626	65121588,65120556,65077854,65068904,65067790,65066736,65062576,65056126,65051470	Gene ID= ENSG00000156076.9 TPM= 70.06 Transcript Type= NA
chr12	65050626	65121566	65050626	65121566	-	ENST00000286574.8@WIF1	ENST00000286574.8	protein_coding	65121044,65120417,65077746,65068764,65067695,65066641,65062481,65056031,65055118,65050626	65121566,65120556,65077854,65068904,65067790,65066736,65062576,65056126,65055213,65051470	Gene ID= ENSG00000156076.9 TPM= 234.69 Transcript Type= protein_coding
chr12	65169582	65248327	65169582	65248327	+	transcript4010.chr12.nnic@LEMD3	transcript4010.chr12.nnic	protein_coding	65169582,65170383,65210926,65215977,65218552,65238502,65238669,65239929,65240136,65240909,65243388,65245669,65245861,65246162	65170244,65171118,65210963,65216043,65218619,65238581,65238814,65240030,65240238,65241087,65243469,65245774,65245939,65248327	Gene ID= ENSG00000174106.2 TPM= 2.34 Transcript Type= NA
chr12	65169571	65248327	65169571	65248327	+	ENST00000308330.2@LEMD3	ENST00000308330.2	protein_coding	65169571,65210926,65215977,65218552,65238502,65238669,65239929,65240136,65240909,65243388,65245669,65245861,65246162	65171118,65210963,65216043,65218619,65238581,65238814,65240030,65240238,65241087,65243469,65245774,65245939,65248327	Gene ID= ENSG00000174106.2 TPM= 51.37 Transcript Type= protein_coding
chr12	65278705	65466907	65278705	65466907	+	transcript4032.chr12.nnic@MSRB3	transcript4032.chr12.nnic	protein_coding	65278705,65326826,65368998,65453728,65463155	65278865,65326934,65369026,65453825,65466907	Gene ID= ENSG00000174099.10 TPM= 9.11 Transcript Type= NA
chr12	65278643	65466906	65278643	65466906	+	ENST00000355192.7@MSRB3	ENST00000355192.7	protein_coding	65278643,65326826,65328526,65368998,65453728,65463155	65278865,65326934,65328603,65369026,65453825,65466906	Gene ID= ENSG00000174099.10 TPM= 51.14 Transcript Type= protein_coding
chr12	66137829	66170012	66137829	66170012	-	transcript4043.chr12.nnic@TMBIM4	transcript4043.chr12.nnic	protein_coding	66169855,66160736,66153340,66152271,66147908,66145841,66138724,66137829	66170012,66161172,66153448,66152376,66147941,66145958,66138769,66138166	Gene ID= ENSG00000155957.17 TPM= 4.67 Transcript Type= NA
chr12	66135846	66170072	66135846	66170072	-	ENST00000358230.7@TMBIM4	ENST00000358230.7	protein_coding	66169855,66153340,66152271,66147908,66145841,66138724,66135846	66170072,66153448,66152376,66147941,66145958,66138769,66138166	Gene ID= ENSG00000155957.17 TPM= 82.9 Transcript Type= protein_coding
chr12	66137839	66170027	66137839	66170027	-	ENST00000633367.1@TMBIM4	ENST00000633367.1	protein_coding	66169855,66153340,66152271,66147908,66145841,66138724,66137839	66170027,66153410,66152376,66147941,66145958,66138769,66138166	Gene ID= ENSG00000155957.17 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr12	66137834	66169998	66137834	66169998	-	ENST00000398033.8@TMBIM4	ENST00000398033.8	protein_coding	66169855,66153340,66152271,66147908,66145841,66137834	66169998,66153448,66152376,66147941,66145958,66138166	Gene ID= ENSG00000155957.17 TPM= 3.5 Transcript Type= protein_coding
chr12	66137840	66169962	66137840	66169962	-	ENST00000286424.12@TMBIM4	ENST00000286424.12	protein_coding	66169855,66160165,66153340,66152271,66147908,66145841,66138724,66137840	66169962,66160305,66153448,66152376,66147941,66145958,66138769,66138166	Gene ID= ENSG00000155957.17 TPM= 1.17 Transcript Type= protein_coding
chr12	66189140	66248642	66189140	66248642	+	transcript4063.chr12.nnic@IRAK3	transcript4063.chr12.nnic	protein_coding	66189140,66193896,66203711,66209456,66210147,66211446,66217171,66226723,66228252,66244486,66244948,66245098,66247695	66189432,66194204,66203893,66209520,66210201,66211597,66217235,66226837,66228370,66244684,66245010,66245262,66248642	Gene ID= ENSG00000090376.10 TPM= 2.34 Transcript Type= NA
chr12	66188879	66254622	66188879	66254622	+	ENST00000261233.8@IRAK3	ENST00000261233.8	protein_coding	66188879,66203711,66209456,66210147,66211446,66217171,66226723,66228252,66244486,66244948,66245098,66247695	66189432,66203893,66209520,66210201,66211597,66217235,66226837,66228370,66244684,66245010,66245262,66254622	Gene ID= ENSG00000090376.10 TPM= 19.85 Transcript Type= protein_coding
chr12	66198751	66203176	66198751	66203176	-	transcript4077.chr12.nnic@NA	transcript4077.chr12.nnic	NA	66198751	66203176	Gene ID= novel_gene_chr12_4078 TPM= 5.84 Transcript Type= NA
chr12	66239301	66240201	66239301	66240201	-	transcript4075.chr12.nnic@NA	transcript4075.chr12.nnic	NA	66239301	66240201	Gene ID= novel_gene_chr12_4076 TPM= 3.5 Transcript Type= NA
chr12	66302580	66343643	66302580	66343643	+	ENST00000545134.1@HELB	ENST00000545134.1	protein_coding	66302580,66304731,66306345,66309706,66313986,66315242,66318638,66321948,66322724,66323983,66324983,66331154,66338001,66343456	66302790,66305150,66306514,66310608,66314163,66315383,66318792,66322029,66322783,66324211,66325126,66331645,66338212,66343643	Gene ID= ENSG00000127311.9 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr12	66347431	66596929	66347431	66596929	-	transcript4080.chr12.nic@GRIP1	transcript4080.chr12.nic	protein_coding	66596847,66541815,66539078,66529831,66517901,66515619,66465275,66462924,66456187,66455409,66445322,66444584,66432548,66420720,66406283,66394208,66392677,66392308,66379280,66377174,66371694,66353417,66347431	66596929,66541950,66539223,66529914,66517976,66515764,66465422,66463093,66456342,66455564,66445508,66444729,66432628,66420789,66406428,66394352,66392816,66392502,66379436,66377285,66371927,66353563,66349246	Gene ID= ENSG00000155974.11 TPM= 4.67 Transcript Type= NA
chr12	67269281	67319951	67269281	67319951	+	ENST00000545606.5@CAND1	ENST00000545606.5	protein_coding	67269281,67281910,67292622,67295033,67297407,67297748,67298950,67302323,67304605,67305104,67307397,67309901,67310152,67311693,67312606	67269785,67282053,67292776,67295156,67297663,67297853,67299095,67302615,67304746,67306597,67307492,67310070,67310316,67311800,67319951	Gene ID= ENSG00000111530.12 TPM= 43.2 Transcript Type= protein_coding
chr12	67648778	67658909	67648778	67658909	+	ENST00000393555.3@DYRK2	ENST00000393555.3	protein_coding	67648778,67657106	67649182,67658909	Gene ID= ENSG00000127334.10 TPM= 5.84 Transcript Type= protein_coding
chr12	68154768	68159747	68154768	68159747	-	ENST00000229135.3@IFNG	ENST00000229135.3	protein_coding	68159502,68158191,68157913,68154768	68159747,68158259,68158095,68155487	Gene ID= ENSG00000111537.4 TPM= 1.17 Transcript Type= protein_coding
chr12	68294568	68332363	68294568	68332363	-	transcript4102.chr12.nic@MDM1	transcript4102.chr12.nic	protein_coding	68332228,68331107,68326657,68325441,68323073,68321525,68321347,68316581,68316078,68314948,68313644,68313443,68302620,68296923,68294568	68332363,68331221,68327021,68325575,68323240,68321628,68321446,68316610,68316253,68315265,68313753,68313552,68302872,68296982,68295366	Gene ID= ENSG00000111554.14 TPM= 4.67 Transcript Type= NA
chr12	68325121	68332381	68325121	68332381	-	ENST00000430606.3@MDM1	ENST00000430606.3	protein_coding	68332228,68331107,68325121	68332381,68331221,68327021	Gene ID= ENSG00000111554.14 TPM= 1.17 Transcript Type= protein_coding
chr12	68294568	68332332	68294568	68332332	-	ENST00000303145.11@MDM1	ENST00000303145.11	protein_coding	68332228,68331107,68326657,68325441,68323073,68321525,68321347,68316078,68314948,68313644,68313443,68302620,68296923,68294568	68332332,68331221,68327021,68325575,68323240,68321628,68321446,68316253,68315265,68313753,68313552,68302872,68296982,68295366	Gene ID= ENSG00000111554.14 TPM= 2.34 Transcript Type= protein_coding
chr12	68610858	68660522	68610858	68660522	+	ENST00000393436.9@RAP1B	ENST00000393436.9	protein_coding	68610858,68648699,68650400,68651995,68654112,68656306,68657101,68659280	68611052,68648781,68650468,68652051,68654252,68656449,68657217,68660522	Gene ID= ENSG00000127314.17 TPM= 40.87 Transcript Type= protein_coding
chr12	68686734	68745809	68686734	68745809	+	ENST00000229179.8@NUP107	ENST00000229179.8	protein_coding	68686734,68688962,68689533,68690631,68691968,68696819,68700726,68702736,68709238,68710005,68713730,68715627,68719341,68719578,68721118,68721841,68722104,68725727,68726499,68727351,68731110,68731607,68732637,68733452,68734708,68735231,68741813,68742355	68687073,68689053,68689619,68690746,68692112,68696922,68700853,68702784,68709309,68710093,68713808,68715740,68719431,68719654,68721177,68721986,68722152,68725796,68726617,68727389,68731260,68731719,68732739,68733612,68734833,68735344,68741980,68745809	Gene ID= ENSG00000111581.9 TPM= 2.34 Transcript Type= protein_coding
chr12	68686951	68742688	68686951	68742688	+	transcript4125.chr12.nic@NUP107	transcript4125.chr12.nic	protein_coding	68686951,68688962,68689533,68690631,68691968,68696819,68700726,68702736,68709238,68710005,68713730,68719341,68719578,68721118,68721841,68722104,68725727,68726499,68727351,68731110,68731607,68732637,68733452,68734708,68735231,68741813,68742355	68687073,68689053,68689619,68690746,68692112,68696922,68700853,68702784,68709309,68710093,68715740,68719431,68719654,68721177,68721986,68722152,68725796,68726617,68727389,68731260,68731719,68732739,68733612,68734833,68735344,68741980,68742688	Gene ID= ENSG00000111581.9 TPM= 7.01 Transcript Type= NA
chr12	68746106	68781467	68746106	68781467	+	ENST00000398004.3@SLC35E3	ENST00000398004.3	protein_coding	68746106,68747930,68752032,68759157,68764704	68746779,68748040,68752190,68759239,68781467	Gene ID= ENSG00000175782.9 TPM= 31.53 Transcript Type= protein_coding
chr12	68809023	68810334	68809023	68810334	+	transcript4192.chr12.nic@MDM2	transcript4192.chr12.nic	protein_coding	68809023,68809208	68809086,68810334	Gene ID= ENSG00000135679.22 TPM= 3.5 Transcript Type= NA
chr12	68808176	68850686	68808176	68850686	+	ENST00000258149.9@MDM2	ENST00000258149.9	protein_coding	68808176,68809208,68813554,68816812,68820325,68824363,68824555,68828771,68835829,68836672,68839274	68808491,68809292,68813628,68816945,68820374,68824430,68824651,68828931,68835984,68836749,68850686	Gene ID= ENSG00000135679.22 TPM= 134.27 Transcript Type= protein_coding
chr12	68842197	68933173	68842197	68933173	-	transcript4152.chr12.nic@CPM	transcript4152.chr12.nic	protein_coding	68933142,68932678,68885792,68871784,68870215,68869325,68866896,68858923,68855981,68842197	68933173,68932840,68885889,68871956,68870399,68869495,68867048,68859071,68856679,68842329	Gene ID= ENSG00000135678.11 TPM= 9.34 Transcript Type= NA
chr12	68851175	68933199	68851175	68933199	-	ENST00000551568.5@CPM	ENST00000551568.5	protein_coding	68933142,68932678,68885792,68871784,68870215,68869325,68866896,68858923,68851175	68933199,68932840,68885889,68871956,68870399,68869495,68867048,68859071,68856679	Gene ID= ENSG00000135678.11 TPM= 16.35 Transcript Type= protein_coding
chr12	68957091	68963486	68957091	68963486	-	transcript4199.chr12.nic@CPM	transcript4199.chr12.nic	protein_coding	68963169,68957091	68963486,68957678	Gene ID= ENSG00000135678.11 TPM= 2.34 Transcript Type= NA
chr12	69239537	69274358	69239537	69274358	+	ENST00000435070.6@CPSF6	ENST00000435070.6	protein_coding	69239537,69251129,69253051,69256697,69257732,69258590,69259428,69260044,69262373,69269512	69239706,69251338,69253154,69256842,69257905,69259094,69259543,69260197,69262562,69274358	Gene ID= ENSG00000111605.16 TPM= 10.51 Transcript Type= protein_coding
chr12	69239568	69266042	69239568	69266042	+	transcript4205.chr12.nic@CPSF6	transcript4205.chr12.nic	protein_coding	69239568,69251129,69253051,69256697,69257732,69258590,69259428,69260044,69262373	69239706,69251338,69253154,69256842,69257905,69259094,69259543,69260197,69266042	Gene ID= ENSG00000111605.16 TPM= 3.5 Transcript Type= NA
chr12	69239616	69269939	69239616	69269939	+	ENST00000266679.8@CPSF6	ENST00000266679.8	protein_coding	69239616,69251129,69253051,69256697,69257732,69258035,69258590,69259428,69260044,69262373,69269512	69239706,69251338,69253154,69256842,69257905,69258145,69259094,69259543,69260197,69262562,69269939	Gene ID= ENSG00000111605.16 TPM= 3.5 Transcript Type= protein_coding
chr12	69350738	69353813	69350738	69353813	+	transcript4211.chr12.nic@LYZ	transcript4211.chr12.nic	protein_coding	69350738,69353153	69352298,69353813	Gene ID= ENSG00000090382.6 TPM= 12.84 Transcript Type= NA
chr12	69348341	69354234	69348341	69354234	+	ENST00000261267.6@LYZ	ENST00000261267.6	protein_coding	69348341,69350108,69352220,69353153	69348544,69350272,69352298,69354234	Gene ID= ENSG00000090382.6 TPM= 422.67 Transcript Type= protein_coding
chr12	69359703	69390796	69359703	69390796	+	ENST00000247843.6@YEATS4	ENST00000247843.6	protein_coding	69359703,69362788,69365633,69365790,69370706,69370888,69390147	69360023,69362907,69365699,69365884,69370798,69370975,69390796	Gene ID= ENSG00000127337.6 TPM= 14.01 Transcript Type= protein_coding
chr12	69585334	69601570	69585334	69601570	+	ENST00000299300.10@CCT2	ENST00000299300.10	protein_coding	69585334,69586270,69586753,69587505,69587930,69588150,69589485,69592059,69592976,69593510,69597156,69597638,69597968,69598322,69599863,69601295	69585524,69586344,69586818,69587616,69588006,69588262,69589687,69592159,69593103,69593613,69597275,69597766,69598071,69598421,69600004,69601570	Gene ID= ENSG00000166226.12 TPM= 95.74 Transcript Type= protein_coding
chr12	69585423	69601570	69585423	69601570	+	transcript4219.chr12.nic@CCT2	transcript4219.chr12.nic	protein_coding	69585423,69586270,69586753,69587505,69587930,69588150,69592059,69592976,69593510,69597156,69597638,69597968,69598322,69599863,69601295	69585524,69586344,69586818,69587616,69588006,69589687,69592159,69593103,69593613,69597275,69597766,69598071,69598421,69600004,69601570	Gene ID= ENSG00000166226.12 TPM= 4.67 Transcript Type= NA
chr12	69738681	69817377	69738681	69817377	+	ENST00000247833.11@RAB3IP	ENST00000247833.11	protein_coding	69738681,69755384,69756405,69784720,69794437,69795141,69800209,69801609,69812778,69812964,69815364	69739031,69755659,69756663,69784815,69794514,69795344,69800337,69801721,69812877,69813033,69817377	Gene ID= ENSG00000127328.21 TPM= 1.17 Transcript Type= protein_coding
chr12	70242306	70243360	70242306	70243360	-	ENST00000549651.1@LINC01481	ENST00000549651.1	antisense_RNA	70243066,70242306	70243360,70242893	Gene ID= ENSG00000257815.5 TPM= 2.34 Transcript Type= antisense_RNA
chr12	70242489	70243358	70242489	70243358	-	ENST00000553135.1@LINC01481	ENST00000553135.1	antisense_RNA	70243312,70242489	70243358,70242893	Gene ID= ENSG00000257815.5 TPM= 1.17 Transcript Type= antisense_RNA
chr12	70243434	70353938	70243434	70353938	+	transcript4231.chr12.nic@CNOT2	transcript4231.chr12.nic	protein_coding	70243434,70278132,70285400,70310895,70319298,70329423,70330287,70332767,70335438,70337389,70338443,70338666,70342107,70342258,70344128,70346180,70353829	70243480,70278274,70285586,70311017,70319364,70329570,70330469,70332846,70335563,70337513,70338563,70338822,70342168,70342307,70344228,70346324,70353938	Gene ID= ENSG00000111596.11 TPM= 2.34 Transcript Type= NA
chr12	70243442	70353938	70243442	70353938	+	transcript4233.chr12.nic@CNOT2	transcript4233.chr12.nic	protein_coding	70243442,70278132,70294237,70310895,70319298,70329423,70330287,70332767,70335438,70337389,70338443,70338666,70342107,70342258,70344128,70346180,70353829	70243480,70278274,70294294,70311017,70319364,70329570,70330469,70332846,70335563,70337513,70338563,70338822,70342168,70342307,70344228,70346324,70353938	Gene ID= ENSG00000111596.11 TPM= 4.09 Transcript Type= NA
chr12	70243436	70353938	70243436	70353938	+	transcript4235.chr12.nic@CNOT2	transcript4235.chr12.nic	protein_coding	70243436,70278132,70310895,70319298,70329423,70330287,70332767,70335438,70337389,70337756,70338443,70338666,70342107,70342258,70344128,70346180,70353829	70243480,70278274,70311017,70319364,70329570,70330469,70332846,70335563,70337513,70337820,70338563,70338822,70342168,70342307,70344228,70346324,70353938	Gene ID= ENSG00000111596.11 TPM= 2.34 Transcript Type= NA
chr12	70243741	70353938	70243741	70353938	+	transcript4236.chr12.nic@CNOT2	transcript4236.chr12.nic	protein_coding	70243741,70278132,70294237,70310895,70319298,70329423,70330287,70332767,70335438,70337389,70338443,70338666,70342107,70342258,70344128,70346180,70353829	70244189,70278274,70294294,70311017,70319364,70329570,70330469,70332846,70335563,70337513,70338563,70338822,70342168,70342307,70344228,70346324,70353938	Gene ID= ENSG00000111596.11 TPM= 2.92 Transcript Type= NA
chr12	70242994	70354992	70242994	70354992	+	ENST00000229195.7@CNOT2	ENST00000229195.7	protein_coding	70242994,70278132,70310895,70319298,70329423,70330287,70332767,70335438,70337389,70338443,70338666,70342107,70342258,70344128,70346180,70353829	70243480,70278274,70311017,70319364,70329570,70330469,70332846,70335563,70337513,70338563,70338822,70342168,70342307,70344228,70346324,70354992	Gene ID= ENSG00000111596.11 TPM= 16.35 Transcript Type= protein_coding
chr12	70366211	70431016	70366211	70431016	+	transcript4260.chr12.nic@KCNMB4	transcript4260.chr12.nic	protein_coding	70366211,70400209,70422707,70430485	70367070,70400336,70422849,70431016	Gene ID= ENSG00000135643.4 TPM= 2.34 Transcript Type= NA
chr12	70366276	70434292	70366276	70434292	+	ENST00000258111.4@KCNMB4	ENST00000258111.4	protein_coding	70366276,70400209,70430485	70367070,70400336,70434292	Gene ID= ENSG00000135643.4 TPM= 4.67 Transcript Type= protein_coding
chr12	70515866	70637440	70515866	70637440	-	ENST00000334414.10@PTPRB	ENST00000334414.10	protein_coding	70637341,70635671,70622390,70609069,70596049,70594467,70592282,70589964,70587007,70581036,70576382,70571824,70571026,70569675,70566435,70562844,70560671,70559343,70555870,70555160,70552777,70544557,70540858,70539939,70539827,70539625,70538924,70538155,70536025,70534833,70534488,70532035,70524471,70515866	70637440,70636066,70622646,70609339,70596327,70594724,70592545,70590233,70587267,70581302,70576645,70572087,70571289,70569938,70566704,70563107,70560934,70559624,70556148,70555309,70553020,70544663,70540957,70540022,70539844,70539706,70539014,70538231,70536159,70534955,70534651,70532170,70524591,70521511	Gene ID= ENSG00000127329.15 TPM= 42.62 Transcript Type= protein_coding
chr12	70607550	70610024	70607550	70610024	-	transcript4301.chr12.nnic@NA	transcript4301.chr12.nnic	NA	70607550	70610024	Gene ID= novel_gene_chr12_4302 TPM= 3.5 Transcript Type= NA
chr12	70638079	70664677	70638079	70664677	-	ENST00000537619.6@PTPRR	ENST00000537619.6	protein_coding	70664333,70662495,70660940,70656704,70638079	70664677,70662605,70661097,70656817,70639277	Gene ID= ENSG00000153233.12 TPM= 5.84 Transcript Type= processed_transcript
chr12	71125101	71157899	71125101	71157899	-	ENST00000546561.2@TSPAN8	ENST00000546561.2	protein_coding	71157619,71144151,71139711,71138156,71137953,71132693,71129331,71125101	71157899,71144213,71139848,71138230,71138060,71132824,71129414,71125387	Gene ID= ENSG00000127324.8 TPM= 3.5 Transcript Type= protein_coding
chr12	71125100	71158099	71125100	71158099	-	ENST00000247829.7@TSPAN8	ENST00000247829.7	protein_coding	71157930,71157619,71144151,71139711,71138156,71137953,71132693,71129331,71125100	71158099,71157787,71144213,71139848,71138230,71138060,71132824,71129414,71125387	Gene ID= ENSG00000127324.8 TPM= 4.67 Transcript Type= protein_coding
chr12	71609472	71663969	71609472	71663969	-	ENST00000378743.7@ZFC3H1	ENST00000378743.7	protein_coding	71663013,71656885,71647749,71644877,71644095,71642436,71638418,71636850,71636490,71635443,71634704,71634155,71633264,71632886,71631972,71631778,71630823,71630600,71629609,71628918,71627751,71626260,71624104,71623360,71620210,71619926,71619315,71615206,71614834,71614535,71613335,71611786,71611058,71610695,71609472	71663969,71657301,71647813,71645075,71644318,71642559,71638515,71637059,71636654,71635580,71634825,71634304,71633438,71633017,71632514,71631887,71630954,71630721,71629710,71629037,71627934,71626446,71624292,71623597,71620315,71620124,71619409,71615316,71614938,71614700,71613435,71611887,71611097,71610757,71610565	Gene ID= ENSG00000133858.15 TPM= 8.17 Transcript Type= protein_coding
chr12	71656343	71663824	71656343	71663824	-	ENST00000548100.1@ZFC3H1	ENST00000548100.1	protein_coding	71663013,71656343	71663824,71657301	Gene ID= ENSG00000133858.15 TPM= 2.34 Transcript Type= protein_coding
chr12	71663009	71680639	71663009	71680639	+	ENST00000308086.2@THAP2	ENST00000308086.2	protein_coding	71663009,71674203,71676689	71664580,71674398,71680639	Gene ID= ENSG00000173451.6 TPM= 9.34 Transcript Type= protein_coding
chr12	71686071	71702043	71686071	71702043	+	transcript4316.chr12.nnic@TMEM19	transcript4316.chr12.nnic	protein_coding	71686071,71689591,71696436,71697280,71698900,71700832,71701016	71686810,71689704,71696573,71697534,71699109,71700878,71702043	Gene ID= ENSG00000139291.13 TPM= 3.5 Transcript Type= NA
chr12	71686071	71704056	71686071	71704056	+	transcript4319.chr12.nic@TMEM19	transcript4319.chr12.nic	protein_coding	71686071,71689591,71696436,71697280,71698900,71700832,71703977	71686810,71689704,71696573,71697534,71699109,71701025,71704056	Gene ID= ENSG00000139291.13 TPM= 4.67 Transcript Type= NA
chr12	71686071	71703219	71686071	71703219	+	transcript4325.chr12.nnic@TMEM19	transcript4325.chr12.nnic	protein_coding	71686071,71689591,71696436,71697280,71698900,71700832,71702972	71686810,71689704,71696573,71697534,71699109,71702496,71703219	Gene ID= ENSG00000139291.13 TPM= 3.5 Transcript Type= NA
chr12	71754836	71774318	71754836	71774318	+	transcript4345.chr12.nic@RAB21	transcript4345.chr12.nic	protein_coding	71754836,71769800,71770592	71755288,71769859,71774318	Gene ID= ENSG00000080371.5 TPM= 3.5 Transcript Type= NA
chr12	71785954	71790605	71785954	71790605	+	transcript4346.chr12.nnic@NA	transcript4346.chr12.nnic	NA	71785954	71790605	Gene ID= novel_gene_chr12_4347 TPM= 3.5 Transcript Type= NA
chr12	71839759	71923645	71839759	71923645	+	ENST00000485960.6@TBC1D15	ENST00000485960.6	protein_coding	71839759,71872070,71872929,71880469,71884811,71893222,71894686,71895947,71896677,71897847,71907022,71913826,71917698,71918451,71920731,71921368,71922983	71839811,71872168,71873003,71880607,71885021,71893324,71894883,71896075,71896780,71897941,71907138,71913926,71917797,71918548,71920847,71921454,71923645	Gene ID= ENSG00000121749.15 TPM= 3.5 Transcript Type= protein_coding
chr12	72262547	72274200	72262547	72274200	-	transcript4360.chr12.nic@TRHDE-AS1	transcript4360.chr12.nic	processed_transcript	72272765,72271823,72262547	72274200,72272162,72264621	Gene ID= ENSG00000236333.3 TPM= 2.34 Transcript Type= NA
chr12	74537827	74545430	74537827	74545430	+	ENST00000519948.3@ATXN7L3B	ENST00000519948.3	protein_coding	74537827	74545430	Gene ID= ENSG00000253719.3 TPM= 12.84 Transcript Type= protein_coding
chr12	75391070	75432688	75391070	75432688	+	ENST00000550916.5@GLIPR1L2	ENST00000550916.5	protein_coding	75391070,75410434,75413598,75422904,75430715,75430824	75391350,75410679,75413701,75422989,75430741,75432688	Gene ID= ENSG00000180481.10 TPM= 1.17 Transcript Type= protein_coding
chr12	75391109	75424040	75391109	75424040	+	ENST00000320460.8@GLIPR1L2	ENST00000320460.8	protein_coding	75391109,75410434,75413598,75422904	75391350,75410679,75413701,75424040	Gene ID= ENSG00000180481.10 TPM= 2.34 Transcript Type= protein_coding
chr12	75480680	75503853	75480680	75503853	+	ENST00000266659.7@GLIPR1	ENST00000266659.7	protein_coding	75480680,75481834,75490406,75495577,75498694,75498824	75481054,75482079,75490518,75495662,75498720,75503853	Gene ID= ENSG00000139278.9 TPM= 11.68 Transcript Type= protein_coding
chr12	76046170	76084685	76046170	76084685	-	transcript4400.chr12.nic@NAP1L1	transcript4400.chr12.nic	protein_coding	76084567,76074203,76068909,76067371,76060138,76059798,76056033,76055019,76053770,76053205,76053091,76050531,76049756,76049200,76048421,76046170	76084685,76074239,76068994,76067473,76060279,76059878,76056161,76055090,76053909,76053350,76053110,76050653,76049785,76049250,76048464,76047718	Gene ID= ENSG00000187109.13 TPM= 6.22 Transcript Type= NA
chr12	76344474	76348442	76344474	76348442	-	ENST00000393262.3@BBS10	ENST00000393262.3	protein_coding	76348162,76344474	76348442,76347787	Gene ID= ENSG00000179941.6 TPM= 16.35 Transcript Type= protein_coding
chr12	76355836	76559809	76355836	76559809	-	ENST00000393250.8@OSBPL8	ENST00000393250.8	protein_coding	76559397,76487510,76450851,76410564,76402689,76399873,76397694,76394645,76392581,76390420,76389645,76386579,76386168,76384254,76378452,76375273,76373344,76371448,76369637,76369214,76358706,76356626,76355836	76559809,76487618,76450979,76410634,76402766,76399974,76397897,76394729,76392752,76390657,76389829,76386660,76386266,76384350,76378550,76375370,76373433,76371584,76369822,76369301,76358811,76356728,76356021	Gene ID= ENSG00000091039.16 TPM= 3.5 Transcript Type= protein_coding
chr12	76550464	76552454	76550464	76552454	+	transcript4456.chr12.nnic@NA	transcript4456.chr12.nnic	NA	76550464	76552454	Gene ID= novel_gene_chr12_4457 TPM= 7.01 Transcript Type= NA
chr12	76764040	76853696	76764040	76853696	+	transcript4464.chr12.nnic@ZDHHC17	transcript4464.chr12.nnic	protein_coding	76764040,76797434,76805317,76809043,76809713,76815146,76815857,76822406,76826908,76827891,76828390,76841982,76842919,76845709,76846596,76848233,76849376,76850847	76764329,76797537,76805439,76809120,76809857,76815210,76816019,76822531,76827050,76827979,76828490,76842106,76842981,76845802,76846679,76848390,76849470,76853696	Gene ID= ENSG00000186908.14 TPM= 2.34 Transcript Type= NA
chr12	76763588	76853696	76763588	76853696	+	ENST00000426126.6@ZDHHC17	ENST00000426126.6	protein_coding	76763588,76797434,76805317,76809043,76809713,76815146,76815857,76822406,76826908,76828390,76841982,76842919,76845709,76846596,76848233,76849376,76850847	76764329,76797537,76805439,76809120,76809857,76815210,76816019,76822531,76827050,76828490,76842106,76842981,76845802,76846679,76848390,76849470,76853696	Gene ID= ENSG00000186908.14 TPM= 19.85 Transcript Type= protein_coding
chr12	76858715	76879060	76858715	76879060	-	ENST00000311083.9@CSRP2	ENST00000311083.9	protein_coding	76878938,76866149,76863176,76860284,76859547,76858715	76879060,76866261,76863344,76860413,76859640,76859028	Gene ID= ENSG00000175183.9 TPM= 35.03 Transcript Type= protein_coding
chr12	79390378	79392951	79390378	79392951	-	transcript4477.chr12.nnic@NA	transcript4477.chr12.nnic	NA	79390378	79392951	Gene ID= novel_gene_chr12_4478 TPM= 2.34 Transcript Type= NA
chr12	79590197	79690594	79590197	79690594	-	transcript4486.chr12.nic@PAWR	transcript4486.chr12.nic	protein_coding	79690556,79689729,79621076,79613575,79596511,79594329,79590197	79690594,79690391,79621207,79613609,79596658,79594433,79592693	Gene ID= ENSG00000177425.10 TPM= 2.34 Transcript Type= NA
chr12	79589788	79690580	79589788	79690580	-	transcript4495.chr12.nic@PAWR	transcript4495.chr12.nic	protein_coding	79689729,79621076,79613575,79596511,79594329,79589788	79690580,79621207,79613609,79596658,79594433,79592693	Gene ID= ENSG00000177425.10 TPM= 5.25 Transcript Type= NA
chr12	79595254	79690594	79595254	79690594	-	transcript4500.chr12.nic@PAWR	transcript4500.chr12.nic	protein_coding	79690556,79689729,79621076,79613575,79595254	79690594,79690391,79621207,79613609,79596658	Gene ID= ENSG00000177425.10 TPM= 2.34 Transcript Type= NA
chr12	79773568	79935198	79773568	79935198	-	ENST00000450142.6@PPP1R12A	ENST00000450142.6	protein_coding	79934695,79872808,79845302,79832332,79828320,79822116,79821078,79820774,79817394,79809795,79808483,79807226,79806166,79805592,79798494,79797195,79796782,79795638,79793863,79790467,79788648,79786374,79781815,79778550,79773568	79935198,79872938,79845420,79832491,79828464,79822190,79821166,79820931,79817518,79810010,79808577,79807330,79806333,79805768,79798584,79797395,79796950,79795759,79793928,79790483,79788783,79786478,79781862,79778600,79776015	Gene ID= ENSG00000058272.16 TPM= 1.4 Transcript Type= protein_coding
chr12	79797330	79935187	79797330	79935187	-	transcript4521.chr12.nic@PPP1R12A	transcript4521.chr12.nic	protein_coding	79934695,79872808,79845302,79832332,79828320,79822116,79821078,79820774,79817394,79809795,79808483,79807226,79806166,79805592,79798494,79797330	79935187,79872938,79845420,79832491,79828464,79822190,79821166,79820931,79817518,79810010,79808577,79807330,79806297,79805768,79798584,79797395	Gene ID= ENSG00000058272.16 TPM= 6.07 Transcript Type= NA
chr12	79797330	79935187	79797330	79935187	-	transcript4524.chr12.nic@PPP1R12A	transcript4524.chr12.nic	protein_coding	79934695,79872808,79845302,79832332,79828320,79822116,79821078,79820774,79817394,79809795,79808483,79807226,79805592,79798494,79797330	79935187,79872938,79845420,79832491,79828464,79822190,79821166,79820931,79817518,79810010,79808577,79807330,79805768,79798584,79797395	Gene ID= ENSG00000058272.16 TPM= 24.75 Transcript Type= NA
chr12	79797330	79935119	79797330	79935119	-	transcript4530.chr12.nic@PPP1R12A	transcript4530.chr12.nic	protein_coding	79934695,79872808,79845302,79832332,79828320,79822116,79821078,79820774,79817394,79809795,79808483,79807226,79798494,79797330	79935119,79872938,79845420,79832491,79828464,79822190,79821166,79820931,79817518,79810010,79808577,79807330,79798584,79797395	Gene ID= ENSG00000058272.16 TPM= 3.74 Transcript Type= NA
chr12	79823593	79935187	79823593	79935187	-	transcript4533.chr12.nic@PPP1R12A	transcript4533.chr12.nic	protein_coding	79934695,79872808,79845302,79832332,79823593	79935187,79872938,79845420,79832491,79828464	Gene ID= ENSG00000058272.16 TPM= 3.5 Transcript Type= NA
chr12	79797234	79935130	79797234	79935130	-	ENST00000547330.5@PPP1R12A	ENST00000547330.5	protein_coding	79934695,79872808,79845302,79832332,79828320,79822116,79821078,79820774,79817394,79809795,79808483,79807226,79806166,79798494,79797234	79935130,79872938,79845420,79832491,79828464,79822190,79821166,79820931,79817518,79810010,79808577,79807330,79806333,79798584,79797395	Gene ID= ENSG00000058272.16 TPM= 1.4 Transcript Type= protein_coding
chr12	80792520	80937925	80792520	80937925	-	ENST00000552864.5@LIN7A	ENST00000552864.5	protein_coding	80937641,80889251,80848251,80845730,80811465,80792520	80937925,80889369,80848322,80845939,80811683,80797726	Gene ID= ENSG00000111052.7 TPM= 5.84 Transcript Type= protein_coding
chr12	81078018	81256755	81078018	81256755	+	transcript4554.chr12.nnic@ACSS3	transcript4554.chr12.nnic	protein_coding	81078018,81109560,81134816,81139131,81143107,81146302,81151844,81152001,81174788,81199341,81216901,81220013,81231057,81233349,81253307,81253495,81254857	81078431,81109704,81135004,81139265,81143247,81146352,81151924,81152096,81174939,81199444,81216996,81220076,81231138,81233471,81253406,81253670,81256755	Gene ID= ENSG00000111058.7 TPM= 2.72 Transcript Type= NA
chr12	81077211	81261205	81077211	81261205	+	ENST00000548058.5@ACSS3	ENST00000548058.5	protein_coding	81077211,81109560,81134816,81139131,81143107,81151844,81152001,81174788,81199341,81216901,81220013,81231057,81233349,81253307,81253495,81254857	81078431,81109704,81135004,81139265,81143247,81151924,81152096,81174939,81199444,81216996,81220076,81231138,81233471,81253406,81253670,81261205	Gene ID= ENSG00000111058.7 TPM= 3.89 Transcript Type= protein_coding
chr12	81078083	81148922	81078083	81148922	+	transcript4563.chr12.nnic@ACSS3	transcript4563.chr12.nnic	protein_coding	81078083,81109560,81134816,81139131,81143107,81146302	81078431,81109704,81135004,81139265,81143247,81148922	Gene ID= ENSG00000111058.7 TPM= 3.89 Transcript Type= NA
chr12	82352306	82358788	82352306	82358788	-	ENST00000256151.7@CCDC59	ENST00000256151.7	protein_coding	82358223,82356960,82354495,82352306	82358788,82357269,82354594,82353312	Gene ID= ENSG00000133773.11 TPM= 6.42 Transcript Type= protein_coding
chr12	82352847	82358786	82352847	82358786	-	ENST00000548126.1@CCDC59	ENST00000548126.1	protein_coding	82358679,82356960,82354495,82352847	82358786,82357269,82354594,82353312	Gene ID= ENSG00000133773.11 TPM= 4.09 Transcript Type= processed_transcript
chr12	82358497	82479236	82358497	82479236	+	ENST00000248306.7@METTL25	ENST00000248306.7	protein_coding	82358497,82386803,82389816,82398795,82402983,82430893,82434695,82438718,82456727,82476644,82477281,82478932	82358824,82386967,82389922,82399394,82403130,82430987,82434724,82438791,82456820,82476718,82477352,82479236	Gene ID= ENSG00000127720.7 TPM= 2.34 Transcript Type= protein_coding
chr12	82358526	82479166	82358526	82479166	+	transcript4568.chr12.nnic@METTL25	transcript4568.chr12.nnic	protein_coding	82358526,82389816,82398795,82402983,82430893,82434695,82438718,82456727,82476644,82477281,82478932	82358824,82389922,82399394,82403130,82430987,82434724,82438791,82456820,82476718,82477352,82479166	Gene ID= ENSG00000127720.7 TPM= 2.34 Transcript Type= NA
chr12	82753328	82757548	82753328	82757548	-	transcript4579.chr12.nnic@NA	transcript4579.chr12.nnic	NA	82753328	82757548	Gene ID= novel_gene_chr12_4580 TPM= 2.34 Transcript Type= NA
chr12	85036314	85124858	85036314	85124858	+	ENST00000525971.6@LRRIQ1	ENST00000525971.6	protein_coding	85036314,85038153,85040490,85044718,85046020,85047247,85052177,85055547,85065262,85066748,85072907,85098355,85098867,85104004,85106522,85121697,85124070	85036407,85038308,85040601,85044809,85046137,85047470,85052251,85057184,85065414,85066898,85073098,85098548,85098994,85104077,85106615,85121876,85124858	Gene ID= ENSG00000133640.18 TPM= 1.17 Transcript Type= retained_intron
chr12	85800697	85836570	85800697	85836570	-	ENST00000361228.4@RASSF9	ENST00000361228.4	protein_coding	85836155,85800697	85836570,85805962	Gene ID= ENSG00000198774.4 TPM= 5.84 Transcript Type= protein_coding
chr12	88035446	88050160	88035446	88050160	+	ENST00000356891.3@C12orf29	ENST00000356891.3	protein_coding	88035446,88040148,88042825,88043599,88045582,88046807,88048234	88035738,88040265,88042920,88043715,88045779,88046976,88050160	Gene ID= ENSG00000133641.17 TPM= 24.52 Transcript Type= protein_coding
chr12	88035505	88050158	88035505	88050158	+	ENST00000550333.5@C12orf29	ENST00000550333.5	protein_coding	88035505,88042825,88043599,88045582,88046807,88048234	88035738,88042920,88043715,88045779,88046976,88050158	Gene ID= ENSG00000133641.17 TPM= 10.51 Transcript Type= nonsense_mediated_decay
chr12	88049020	88142216	88049020	88142216	-	ENST00000552810.5@CEP290	ENST00000552810.5	protein_coding	88141900,88141206,88140956,88139495,88139145,88136643,88131165,88130545,88130268,88129694,88128946,88126316,88125246,88120997,88120114,88118643,88118483,88117033,88115098,88114420,88111694,88111202,88109066,88106996,88106675,88102838,88096888,88093770,88092681,88090728,88089032,88087780,88086391,88086039,88084586,88083847,88083031,88080182,88079092,88077697,88077222,88071781,88071294,88068522,88063981,88062692,88060830,88059898,88058848,88055576,88054340,88053652,88050354,88049020	88142216,88141334,88141033,88139564,88139191,88136786,88131218,88130565,88130420,88129876,88129035,88126438,88125369,88121166,88120276,88118743,88118570,88117145,88115182,88114562,88111858,88111351,88109181,88107098,88106905,88103011,88096999,88093975,88092832,88090839,88089487,88087944,88086498,88086173,88084852,88083954,88083230,88080395,88079229,88077918,88077344,88071926,88071449,88068645,88064115,88062778,88060994,88060020,88059020,88055717,88054413,88053746,88050433,88049414	Gene ID= ENSG00000198707.14 TPM= 1.17 Transcript Type= protein_coding
chr12	88133073	88142088	88133073	88142088	-	transcript4597.chr12.nic@CEP290	transcript4597.chr12.nic	protein_coding	88141900,88141206,88140956,88139495,88139145,88133073	88142088,88141334,88141033,88139564,88139191,88136786	Gene ID= ENSG00000198707.14 TPM= 2.34 Transcript Type= NA
chr12	88142296	88199887	88142296	88199887	+	ENST00000266712.10@TMTC3	ENST00000266712.10	protein_coding	88142296,88148288,88153291,88154288,88160114,88160679,88166330,88172597,88174607,88176208,88188843,88190453,88192604,88194838	88142487,88148504,88153509,88154387,88160229,88160851,88166582,88172745,88174727,88176319,88188946,88190622,88192830,88199887	Gene ID= ENSG00000139324.11 TPM= 5.84 Transcript Type= protein_coding
chr12	88379333	88382146	88379333	88382146	-	transcript4603.chr12.nnic@NA	transcript4603.chr12.nnic	NA	88379333	88382146	Gene ID= novel_gene_chr12_4604 TPM= 2.34 Transcript Type= NA
chr12	89347232	89353271	89347232	89353271	-	ENST00000279488.7@DUSP6	ENST00000279488.7	protein_coding	89351640,89350588,89347232	89353271,89351025,89349561	Gene ID= ENSG00000139318.7 TPM= 86.4 Transcript Type= protein_coding
chr12	89348064	89352519	89348064	89352519	-	transcript4619.chr12.nic@DUSP6	transcript4619.chr12.nic	protein_coding	89351640,89348064	89352519,89351025	Gene ID= ENSG00000139318.7 TPM= 8.17 Transcript Type= NA
chr12	89419718	89526046	89419718	89526046	-	transcript4628.chr12.nic@POC1B	transcript4628.chr12.nic	protein_coding	89525881,89525120,89497171,89491936,89472168,89471614,89470361,89467617,89466770,89425161,89419718	89526046,89525204,89497342,89492115,89472275,89471729,89470494,89467685,89466922,89425379,89421257	Gene ID= ENSG00000139323.13 TPM= 3.5 Transcript Type= NA
chr12	89419718	89526046	89419718	89526046	-	transcript4630.chr12.nnic@POC1B	transcript4630.chr12.nnic	protein_coding	89525881,89525120,89497171,89491936,89472168,89471614,89470361,89467617,89466770,89459638,89419718	89526046,89525204,89497342,89492115,89472275,89471729,89470494,89467685,89466922,89459718,89421257	Gene ID= ENSG00000139323.13 TPM= 2.34 Transcript Type= NA
chr12	89419718	89525615	89419718	89525615	-	ENST00000393179.8@POC1B	ENST00000393179.8	protein_coding	89525120,89491936,89472168,89471614,89470361,89467617,89466770,89459638,89425161,89419718	89525615,89492115,89472275,89471729,89470494,89467685,89466922,89459718,89425379,89421257	Gene ID= ENSG00000139323.13 TPM= 4.67 Transcript Type= protein_coding
chr12	89419718	89526024	89419718	89526024	-	ENST00000313546.7@POC1B	ENST00000313546.7	protein_coding	89525881,89525120,89497171,89491936,89472168,89471614,89470361,89467617,89466770,89459638,89425161,89419718	89526024,89525204,89497342,89492115,89472275,89471729,89470494,89467685,89466922,89459718,89425379,89421257	Gene ID= ENSG00000139323.13 TPM= 5.84 Transcript Type= protein_coding
chr12	89519408	89524806	89519408	89524806	-	ENST00000529983.2@GALNT4	ENST00000529983.2	protein_coding	89519408	89524806	Gene ID= ENSG00000257594.3 TPM= 5.25 Transcript Type= protein_coding
chr12	89519408	89526198	89519408	89526198	-	ENST00000548729.5@POC1B-GALNT4	ENST00000548729.5	protein_coding	89525881,89525120,89519408	89526198,89525204,89524440	Gene ID= ENSG00000259075.6 TPM= 2.92 Transcript Type= protein_coding
chr12	89524866	89528145	89524866	89528145	+	transcript4641.chr12.nnic@NA	transcript4641.chr12.nnic	NA	89524866	89528145	Gene ID= novel_gene_chr12_4642 TPM= 2.34 Transcript Type= NA
chr12	89589804	89709562	89589804	89709562	-	transcript4647.chr12.nic@ATP2B1	transcript4647.chr12.nic	protein_coding	89709219,89655679,89642158,89634997,89634778,89630505,89627678,89626454,89624183,89621549,89619999,89616802,89611193,89610421,89609937,89604155,89603712,89603043,89601326,89599117,89589804	89709562,89656107,89642355,89635251,89634903,89630645,89627716,89626615,89624397,89621791,89620240,89617039,89611372,89610508,89610043,89604346,89603925,89603254,89601433,89599299,89591295	Gene ID= ENSG00000070961.15 TPM= 3.89 Transcript Type= NA
chr12	89630516	89709643	89630516	89709643	-	transcript4655.chr12.nic@ATP2B1	transcript4655.chr12.nic	protein_coding	89708596,89655679,89642158,89634997,89634778,89630516	89709643,89656107,89642355,89635251,89634903,89630645	Gene ID= ENSG00000070961.15 TPM= 10.51 Transcript Type= NA
chr12	89588072	89708831	89588072	89708831	-	ENST00000428670.7@ATP2B1	ENST00000428670.7	protein_coding	89708596,89655679,89642158,89634997,89634778,89630505,89627678,89626454,89624183,89621549,89619999,89616802,89611193,89610421,89609937,89604155,89603712,89603043,89601326,89599117,89588072	89708831,89656107,89642355,89635251,89634903,89630645,89627716,89626615,89624397,89621791,89620240,89617039,89611372,89610508,89610043,89604346,89603925,89603254,89601433,89599299,89591295	Gene ID= ENSG00000070961.15 TPM= 3.5 Transcript Type= protein_coding
chr12	89708941	89711671	89708941	89711671	+	transcript4658.chr12.nnic@NA	transcript4658.chr12.nnic	NA	89708941	89711671	Gene ID= novel_gene_chr12_4659 TPM= 3.5 Transcript Type= NA
chr12	91102629	91111831	91102629	91111831	-	ENST00000266718.4@LUM	ENST00000266718.4	protein_coding	91111398,91108118,91102629	91111831,91109000,91104319	Gene ID= ENSG00000139329.4 TPM= 396.98 Transcript Type= protein_coding
chr12	91140484	91183123	91140484	91183123	-	ENST00000052754.9@DCN	ENST00000052754.9	protein_coding	91182655,91178342,91164605,91158296,91157075,91153096,91151654,91140484	91183123,91178585,91164717,91158509,91157188,91153189,91151792,91146252	Gene ID= ENSG00000011465.16 TPM= 12.84 Transcript Type= protein_coding
chr12	91145736	91182824	91145736	91182824	-	ENST00000552962.5@DCN	ENST00000552962.5	protein_coding	91182655,91179362,91178342,91164605,91158296,91157075,91153096,91151654,91145736	91182824,91179686,91178585,91164717,91158509,91157188,91153189,91151792,91146252	Gene ID= ENSG00000011465.16 TPM= 36.78 Transcript Type= protein_coding
chr12	91145259	91179582	91145259	91179582	-	ENST00000393155.5@DCN	ENST00000393155.5	protein_coding	91179362,91178342,91164605,91158296,91157075,91153096,91151654,91145259	91179582,91178585,91164717,91158509,91157188,91153189,91151792,91146252	Gene ID= ENSG00000011465.16 TPM= 58.96 Transcript Type= protein_coding
chr12	92122751	92124216	92122751	92124216	+	transcript4693.chr12.nnic@NA	transcript4693.chr12.nnic	NA	92122751	92124216	Gene ID= novel_gene_chr12_4694 TPM= 2.34 Transcript Type= NA
chr12	92143125	92145845	92143125	92145845	-	transcript4701.chr12.nnic@NA	transcript4701.chr12.nnic	NA	92143125	92145845	Gene ID= novel_gene_chr12_4702 TPM= 8.17 Transcript Type= NA
chr12	92780334	92929341	92780334	92929341	-	transcript4709.chr12.nic@EEA1	transcript4709.chr12.nic	protein_coding	92929043,92891629,92864860,92857431,92857275,92853915,92852912,92852175,92851111,92842465,92832512,92827912,92826166,92819308,92816200,92812980,92811279,92809017,92802404,92801600,92798892,92787867,92781950,92780334	92929341,92891721,92864987,92857485,92857340,92853954,92853025,92852296,92851266,92842581,92832850,92828061,92826285,92819511,92816400,92813093,92811434,92809156,92802734,92801701,92799086,92788049,92782135,92780411	Gene ID= ENSG00000102189.16 TPM= 3.5 Transcript Type= NA
chr12	93378550	93402301	93378550	93402301	+	ENST00000549992.5@NUDT4	ENST00000549992.5	protein_coding	93378550,93394609,93395489,93398771,93399177	93378790,93394719,93395533,93398855,93402301	Gene ID= ENSG00000173598.13 TPM= 19.85 Transcript Type= protein_coding
chr12	93405690	93442262	93405690	93442262	-	ENST00000318066.6@UBE2N	ENST00000318066.6	protein_coding	93441855,93411053,93410734,93405690	93442262,93411299,93410874,93410079	Gene ID= ENSG00000177889.9 TPM= 22.18 Transcript Type= protein_coding
chr12	93408371	93441943	93408371	93441943	-	ENST00000550657.1@UBE2N	ENST00000550657.1	protein_coding	93441855,93408371	93441943,93411299	Gene ID= ENSG00000177889.9 TPM= 2.34 Transcript Type= protein_coding
chr12	93467488	93516213	93467488	93516213	+	ENST00000549982.5@MRPL42	ENST00000549982.5	protein_coding	93467488,93469192,93476954,93479388,93487497,93501176	93467554,93469355,93477017,93479472,93487660,93516213	Gene ID= ENSG00000198015.12 TPM= 23.35 Transcript Type= protein_coding
chr12	93467517	93502652	93467517	93502652	+	ENST00000393128.8@MRPL42	ENST00000393128.8	protein_coding	93467517,93469192,93476954,93479388,93487497,93501185	93467554,93469355,93477017,93479472,93487660,93502652	Gene ID= ENSG00000198015.12 TPM= 15.18 Transcript Type= protein_coding
chr12	93569814	93576745	93569814	93576745	+	ENST00000340600.6@SOCS2	ENST00000340600.6	protein_coding	93569814,93572685,93574722	93570198,93573036,93576745	Gene ID= ENSG00000120833.13 TPM= 2.92 Transcript Type= protein_coding
chr12	93571883	93576206	93571883	93576206	+	transcript4757.chr12.nic@SOCS2	transcript4757.chr12.nic	protein_coding	93571883,93572685,93574722	93572375,93573036,93576206	Gene ID= ENSG00000120833.13 TPM= 7.01 Transcript Type= NA
chr12	93571681	93576744	93571681	93576744	+	ENST00000622746.4@SOCS2	ENST00000622746.4	protein_coding	93571681,93572685,93574722	93572186,93573036,93576744	Gene ID= ENSG00000120833.13 TPM= 6.42 Transcript Type= protein_coding
chr12	93570399	93576174	93570399	93576174	+	ENST00000549206.5@SOCS2	ENST00000549206.5	protein_coding	93570399,93572685,93574722	93570665,93573036,93576174	Gene ID= ENSG00000120833.13 TPM= 2.34 Transcript Type= protein_coding
chr12	93677375	93850736	93677375	93850736	+	ENST00000332896.7@CRADD	ENST00000332896.7	protein_coding	93677375,93678769,93849970	93677472,93679072,93850736	Gene ID= ENSG00000169372.12 TPM= 12.84 Transcript Type= protein_coding
chr12	93707791	93737823	93707791	93737823	-	ENST00000550287.1@AC012085.2	ENST00000550287.1	antisense_RNA	93737699,93735565,93707791	93737823,93735733,93709083	Gene ID= ENSG00000258274.1 TPM= 1.17 Transcript Type= antisense_RNA
chr12	94148723	94307675	94148723	94307675	+	ENST00000258526.8@PLXNC1	ENST00000258526.8	protein_coding	94148723,94169153,94181446,94186373,94209590,94220016,94224228,94226605,94227149,94237664,94240485,94243938,94247903,94248227,94251426,94254787,94255193,94259337,94259610,94260642,94265079,94279472,94282298,94294486,94297189,94297316,94298632,94300910,94303756,94303977,94305181	94150033,94169293,94181580,94186473,94209704,94220163,94224315,94226707,94227235,94237803,94240664,94244025,94248106,94248412,94251528,94254888,94255296,94259375,94259734,94260840,94265225,94279649,94282401,94294540,94297220,94297423,94298795,94301057,94303896,94304051,94307675	Gene ID= ENSG00000136040.8 TPM= 10.51 Transcript Type= protein_coding
chr12	94567124	94650562	94567124	94650562	-	ENST00000261226.8@TMCC3	ENST00000261226.8	protein_coding	94650353,94581622,94578394,94567124	94650562,94582538,94578529,94571737	Gene ID= ENSG00000057704.12 TPM= 3.5 Transcript Type= protein_coding
chr12	94971333	95003770	94971333	95003770	-	ENST00000327772.6@NDUFA12	ENST00000327772.6	protein_coding	95003595,95002739,94994170,94971333	95003770,95002821,94994257,94971620	Gene ID= ENSG00000184752.12 TPM= 43.2 Transcript Type= protein_coding
chr12	94971336	95003713	94971336	95003713	-	ENST00000547986.5@NDUFA12	ENST00000547986.5	protein_coding	95003595,95002739,94971336	95003713,95002821,94971620	Gene ID= ENSG00000184752.12 TPM= 1.17 Transcript Type= protein_coding
chr12	94980691	94984724	94980691	94984724	+	transcript4791.chr12.nnic@NA	transcript4791.chr12.nnic	NA	94980691	94984724	Gene ID= novel_gene_chr12_4792 TPM= 4.67 Transcript Type= NA
chr12	95020281	95073624	95020281	95073624	-	transcript4794.chr12.nnic@NR2C1	transcript4794.chr12.nnic	protein_coding	95073380,95067331,95062508,95059906,95058310,95057731,95057553,95051762,95049068,95040476,95031349,95028387,95025150,95021474,95020281	95073624,95067391,95062738,95059984,95058489,95057878,95057643,95051943,95049233,95040597,95031488,95028524,95025255,95022403,95021249	Gene ID= ENSG00000120798.16 TPM= 4.96 Transcript Type= NA
chr12	95020229	95073703	95020229	95073703	-	ENST00000333003.9@NR2C1	ENST00000333003.9	protein_coding	95073380,95067331,95062508,95059906,95058310,95057731,95057553,95051762,95049068,95040476,95031349,95028387,95025150,95020229	95073703,95067391,95062738,95059984,95058489,95057878,95057643,95051943,95049233,95040597,95031488,95028524,95025255,95022403	Gene ID= ENSG00000120798.16 TPM= 1.46 Transcript Type= protein_coding
chr12	95021893	95073624	95021893	95073624	-	transcript4798.chr12.nic@NR2C1	transcript4798.chr12.nic	protein_coding	95073380,95067331,95062508,95059906,95057731,95057553,95051762,95049068,95040476,95031349,95028387,95025150,95021893	95073624,95067391,95062738,95059984,95058489,95057643,95051943,95049233,95040597,95031488,95028524,95025255,95022403	Gene ID= ENSG00000120798.16 TPM= 8.47 Transcript Type= NA
chr12	95021893	95073624	95021893	95073624	-	transcript4800.chr12.nic@NR2C1	transcript4800.chr12.nic	protein_coding	95073380,95067331,95062508,95059906,95057731,95057553,95051762,95049068,95031349,95028387,95025150,95021893	95073624,95067391,95062738,95059984,95058489,95057643,95051943,95049233,95031488,95028524,95025255,95022403	Gene ID= ENSG00000120798.16 TPM= 2.63 Transcript Type= NA
chr12	95217746	95302790	95217746	95302790	+	ENST00000436874.5@VEZT	ENST00000436874.5	protein_coding	95217746,95251940,95257150,95262906,95266357,95270051,95274742,95282313,95287664,95294272,95296051,95300165	95217886,95252071,95257239,95263081,95266632,95270188,95274889,95282644,95287857,95294372,95296258,95302790	Gene ID= ENSG00000028203.17 TPM= 9.34 Transcript Type= protein_coding
chr12	95217761	95301172	95217761	95301172	+	ENST00000547997.5@VEZT	ENST00000547997.5	protein_coding	95217761,95251940,95256550,95257150,95262906,95266357,95270051,95274742,95282313,95287664,95294272,95296051,95300165	95217886,95252071,95256622,95257239,95263081,95266632,95270188,95274889,95282644,95287857,95294372,95296258,95301172	Gene ID= ENSG00000028203.17 TPM= 12.84 Transcript Type= nonsense_mediated_decay
chr12	95473951	95515839	95473951	95515839	+	ENST00000323666.9@METAP2	ENST00000323666.9	protein_coding	95473951,95476071,95483215,95485879,95494056,95494957,95496004,95504065,95511895,95512801,95513652	95474330,95476178,95483280,95485981,95494217,95495138,95496098,95504161,95511998,95512916,95515839	Gene ID= ENSG00000111142.13 TPM= 98.08 Transcript Type= protein_coding
chr12	95474162	95514326	95474162	95514326	+	ENST00000551840.5@METAP2	ENST00000551840.5	protein_coding	95474162,95476074,95483215,95485879,95494056,95494957,95496004,95504065,95511895,95512801,95513652	95474330,95476178,95483280,95485981,95494217,95495138,95496098,95504161,95511998,95512916,95514326	Gene ID= ENSG00000111142.13 TPM= 68.89 Transcript Type= protein_coding
chr12	95657807	95790758	95657807	95790758	-	ENST00000343702.8@NTN4	ENST00000343702.8	protein_coding	95790255,95786939,95737866,95713212,95710441,95683498,95682707,95670078,95665810,95657807	95790758,95787468,95738144,95713338,95710629,95683711,95682822,95670146,95665980,95659222	Gene ID= ENSG00000074527.11 TPM= 481.81 Transcript Type= protein_coding
chr12	95657807	95790764	95657807	95790764	-	ENST00000344911.8@NTN4	ENST00000344911.8	protein_coding	95790728,95790251,95786939,95737866,95713212,95710441,95683498,95682707,95670078,95665810,95657807	95790764,95790254,95787468,95738144,95713338,95710629,95683711,95682822,95670146,95665980,95659222	Gene ID= ENSG00000074527.11 TPM= 6.6 Transcript Type= protein_coding
chr12	95858928	95867053	95858928	95867053	+	ENST00000266735.9@SNRPF	ENST00000266735.9	protein_coding	95858928,95861168,95865324,95866005	95859076,95861293,95865388,95867053	Gene ID= ENSG00000139343.10 TPM= 18.68 Transcript Type= protein_coding
chr12	95943293	95968716	95943293	95968716	+	ENST00000266736.6@AMDHD1	ENST00000266736.6	protein_coding	95943293,95952717,95954911,95956685,95960398,95962355,95965686,95966348,95967756	95943535,95952823,95954975,95956962,95960623,95962479,95965779,95966508,95968716	Gene ID= ENSG00000139344.7 TPM= 4.67 Transcript Type= protein_coding
chr12	96000828	96035661	96000828	96035661	-	ENST00000228740.6@LTA4H	ENST00000228740.6	protein_coding	96035361,96029055,96027444,96024479,96022147,96021085,96019168,96018763,96017557,96017044,96015583,96014855,96013750,96013188,96009094,96006314,96003838,96002960,96000828	96035661,96029185,96027564,96024547,96022251,96021137,96019240,96018903,96017580,96017114,96015694,96014999,96013853,96013258,96009148,96006409,96003920,96003064,96001106	Gene ID= ENSG00000111144.9 TPM= 445.02 Transcript Type= protein_coding
chr12	96000830	96035641	96000830	96035641	-	transcript4906.chr12.nic@LTA4H	transcript4906.chr12.nic	protein_coding	96035361,96029055,96027444,96024479,96022147,96021085,96019168,96018763,96017557,96017044,96015583,96014855,96013750,96013188,96009094,96006314,96002960,96000830	96035641,96029185,96027564,96024547,96022251,96021137,96019240,96018903,96017580,96017114,96015694,96014999,96013853,96013258,96009148,96006409,96003064,96001106	Gene ID= ENSG00000111144.9 TPM= 81.9 Transcript Type= NA
chr12	96000833	96035528	96000833	96035528	-	ENST00000553041.5@LTA4H	ENST00000553041.5	protein_coding	96035361,96029055,96027444,96024479,96022147,96021085,96020690,96019168,96018763,96017557,96017044,96015583,96014855,96013750,96009094,96006314,96003838,96002960,96000833	96035528,96029185,96027564,96024547,96022251,96021137,96020758,96019240,96018903,96017580,96017114,96015694,96014999,96013853,96013258,96006409,96003920,96003064,96001106	Gene ID= ENSG00000111144.9 TPM= 17.51 Transcript Type= retained_intron
chr12	96194415	96269835	96194415	96269835	+	transcript4919.chr12.nic@ELK3	transcript4919.chr12.nic	protein_coding	96194415,96198026,96223565,96246940,96259731,96267082	96194705,96198142,96223773,96247734,96259853,96269835	Gene ID= ENSG00000111145.7 TPM= 2.34 Transcript Type= NA
chr12	96194387	96228444	96194387	96228444	+	transcript4926.chr12.nic@ELK3	transcript4926.chr12.nic	protein_coding	96194387,96223565	96194705,96228444	Gene ID= ENSG00000111145.7 TPM= 2.34 Transcript Type= NA
chr12	96194382	96269835	96194382	96269835	+	ENST00000228741.7@ELK3	ENST00000228741.7	protein_coding	96194382,96223565,96246940,96259731,96267082	96194705,96223773,96247734,96259853,96269835	Gene ID= ENSG00000111145.7 TPM= 53.71 Transcript Type= protein_coding
chr12	96278261	96400560	96278261	96400560	-	ENST00000261211.7@CDK17	ENST00000261211.7	protein_coding	96399986,96334719,96323948,96313321,96311052,96300304,96298869,96297627,96297270,96294999,96289167,96286664,96286043,96283603,96282509,96280808,96278261	96400560,96334865,96324112,96313454,96311177,96300360,96298983,96297721,96297332,96295122,96289287,96286761,96286148,96283645,96282599,96280885,96280279	Gene ID= ENSG00000059758.7 TPM= 2.34 Transcript Type= protein_coding
chr12	96278553	96400571	96278553	96400571	-	transcript4936.chr12.nic@CDK17	transcript4936.chr12.nic	protein_coding	96399986,96334719,96323948,96313321,96311052,96298869,96297270,96294999,96289167,96286664,96286043,96283603,96282509,96280808,96278553	96400571,96334865,96324112,96313454,96311177,96300360,96297721,96295122,96289287,96286761,96286148,96283645,96282599,96280885,96280279	Gene ID= ENSG00000059758.7 TPM= 3.5 Transcript Type= NA
chr12	96316618	96321969	96316618	96321969	+	transcript4942.chr12.nnic@NA	transcript4942.chr12.nnic	NA	96316618	96321969	Gene ID= novel_gene_chr12_4943 TPM= 2.34 Transcript Type= NA
chr12	96907259	96953582	96907259	96953582	+	transcript4949.chr12.nic@NEDD1	transcript4949.chr12.nic	protein_coding	96907259,96907604,96909752,96912723,96917621,96919985,96934976,96936611,96937198,96940409,96942577,96943560,96944639,96945693,96951432,96951949	96907300,96907624,96909895,96912817,96917737,96920125,96935205,96936812,96937393,96940537,96942624,96943762,96944795,96945849,96951498,96953582	Gene ID= ENSG00000139350.11 TPM= 2.34 Transcript Type= NA
chr12	96907224	96953351	96907224	96953351	+	ENST00000429527.6@NEDD1	ENST00000429527.6	protein_coding	96907224,96909752,96912723,96917621,96919985,96934976,96936611,96937198,96940409,96942577,96943560,96944639,96945693,96951432,96951949	96907300,96909895,96912817,96917737,96920125,96935205,96936812,96937393,96940537,96942624,96943762,96944795,96945849,96951498,96953351	Gene ID= ENSG00000139350.11 TPM= 1.17 Transcript Type= protein_coding
chr12	96907063	96953221	96907063	96953221	+	transcript4961.chr12.nic@NEDD1	transcript4961.chr12.nic	protein_coding	96907063,96907604,96917621,96919985,96934976,96936611,96937198,96940409,96942577,96943560,96944639,96945693,96951432,96951949	96907300,96907624,96917737,96920125,96935205,96936812,96937393,96940537,96942624,96943762,96944795,96945849,96951498,96953221	Gene ID= ENSG00000139350.11 TPM= 2.34 Transcript Type= NA
chr12	96907223	96953777	96907223	96953777	+	ENST00000266742.8@NEDD1	ENST00000266742.8	protein_coding	96907223,96907604,96909752,96912723,96917621,96919985,96934976,96936611,96937198,96940409,96942577,96943560,96944639,96945693,96951432,96951949	96907300,96907856,96909895,96912817,96917737,96920125,96935205,96936812,96937393,96940537,96942624,96943762,96944795,96945849,96951498,96953777	Gene ID= ENSG00000139350.11 TPM= 1.17 Transcript Type= protein_coding
chr12	98453835	98457145	98453835	98457145	-	ENST00000554295.1@SLC9A7P1	ENST00000554295.1	transcribed_processed_pseudogene	98453835	98457145	Gene ID= ENSG00000227825.4 TPM= 3.5 Transcript Type= processed_transcript
chr12	98515604	98550312	98515604	98550312	+	transcript4966.chr12.nnic@TMPO	transcript4966.chr12.nnic	protein_coding	98515604,98527886,98531680,98537475,98544230,98544442,98544951,98546359,98547573,98549949	98516146,98528012,98531838,98537572,98544349,98544537,98545061,98546447,98548122,98550312	Gene ID= ENSG00000120802.13 TPM= 2.63 Transcript Type= NA
chr12	98515586	98550351	98515586	98550351	+	transcript4971.chr12.nnic@TMPO	transcript4971.chr12.nnic	protein_coding	98515586,98527886,98531680,98537475,98544230,98544442,98544951,98546359,98547573,98549426	98516146,98528012,98531838,98537572,98544349,98544537,98545061,98546447,98548849,98550351	Gene ID= ENSG00000120802.13 TPM= 2.72 Transcript Type= NA
chr12	98515580	98550312	98515580	98550312	+	transcript4978.chr12.nnic@TMPO	transcript4978.chr12.nnic	protein_coding	98515580,98527886,98531680,98537475,98544951,98546359,98547573,98549425	98516146,98528012,98531838,98537572,98545061,98546447,98548828,98550312	Gene ID= ENSG00000120802.13 TPM= 3.79 Transcript Type= NA
chr12	98515625	98550312	98515625	98550312	+	transcript4982.chr12.nnic@TMPO	transcript4982.chr12.nnic	protein_coding	98515625,98527886,98531680,98537475,98546359,98547573,98549425	98516146,98528012,98531838,98537572,98546447,98548828,98550312	Gene ID= ENSG00000120802.13 TPM= 3.79 Transcript Type= NA
chr12	98515630	98535634	98515630	98535634	+	ENST00000266732.8@TMPO	ENST00000266732.8	protein_coding	98515630,98527886,98531680,98532823	98516146,98528012,98531838,98535634	Gene ID= ENSG00000120802.13 TPM= 40.87 Transcript Type= protein_coding
chr12	98593591	98606379	98593591	98606379	+	ENST00000401722.7@SLC25A3	ENST00000401722.7	protein_coding	98593591,98593979,98595727,98597856,98598522,98599955,98601171,98601368	98593740,98594135,98595848,98598035,98598703,98600127,98601281,98606379	Gene ID= ENSG00000075415.12 TPM= 210.17 Transcript Type= protein_coding
chr12	98593625	98601997	98593625	98601997	+	ENST00000188376.9@SLC25A3	ENST00000188376.9	protein_coding	98593625,98595727,98597856,98598522,98599955,98601171,98601368	98594135,98595848,98598035,98598703,98600127,98601281,98601997	Gene ID= ENSG00000075415.12 TPM= 30.74 Transcript Type= protein_coding
chr12	98593686	98601708	98593686	98601708	+	transcript5000.chr12.nic@SLC25A3	transcript5000.chr12.nic	protein_coding	98593686,98593975,98599955,98601171,98601368	98593740,98598703,98600127,98601281,98601708	Gene ID= ENSG00000075415.12 TPM= 11.68 Transcript Type= NA
chr12	98593660	98601708	98593660	98601708	+	ENST00000552981.5@SLC25A3	ENST00000552981.5	protein_coding	98593660,98593975,98595727,98597856,98598522,98599955,98601171,98601368	98593740,98594135,98595848,98598035,98598703,98600127,98601281,98601708	Gene ID= ENSG00000075415.12 TPM= 209.38 Transcript Type= protein_coding
chr12	98613405	98645113	98613405	98645113	-	ENST00000342502.6@IKBIP	ENST00000342502.6	protein_coding	98644523,98634296,98613405	98645113,98634413,98614340	Gene ID= ENSG00000166130.14 TPM= 14.01 Transcript Type= protein_coding
chr12	98613405	98644954	98613405	98644954	-	ENST00000393042.3@IKBIP	ENST00000393042.3	protein_coding	98644523,98613405	98644954,98614340	Gene ID= ENSG00000166130.14 TPM= 3.5 Transcript Type= protein_coding
chr12	98645141	98733527	98645141	98733527	+	ENST00000551964.5@APAF1	ENST00000551964.5	protein_coding	98645141,98648319,98648626,98649487,98659160,98662456,98662675,98665553,98666190,98667513,98670973,98671535,98677425,98680277,98683143,98686748,98699408,98703371,98706485,98708585,98712319,98715427,98723193,98723639,98725415,98727173,98732420	98645835,98648497,98648815,98649684,98659343,98662568,98662806,98665791,98666357,98667644,98671086,98671719,98677551,98680402,98683274,98686873,98699569,98703499,98706610,98708704,98712435,98715552,98723312,98723764,98725540,98727316,98733527	Gene ID= ENSG00000120868.13 TPM= 3.5 Transcript Type= protein_coding
chr12	99653679	99984955	99653679	99984955	-	transcript5016.chr12.nic@ANKS1B	transcript5016.chr12.nic	protein_coding	99984104,99825309,99812155,99806404,99782022,99779871,99775548,99772922,99653679	99984955,99825389,99812311,99806700,99782097,99779972,99775661,99773088,99655210	Gene ID= ENSG00000185046.18 TPM= 2.34 Transcript Type= NA
chr12	100037143	100142874	100037143	100142874	-	transcript5019.chr12.nic@UHRF1BP1L	transcript5019.chr12.nic	protein_coding	100142592,100128580,100108386,100103913,100102766,100098352,100097365,100095667,100088915,100086275,100084476,100083016,100072672,100059850,100058029,100057571,100051079,100050168,100047943,100047530,100039596,100037143	100142874,100128725,100108548,100103951,100102857,100098541,100097505,100095837,100089095,100086358,100084658,100083134,100072813,100060043,100059533,100057746,100051221,100050318,100048196,100047638,100039789,100037755	Gene ID= ENSG00000111647.12 TPM= 2.34 Transcript Type= NA
chr12	100057346	100142883	100057346	100142883	-	transcript5023.chr12.nic@UHRF1BP1L	transcript5023.chr12.nic	protein_coding	100142592,100108386,100103913,100102766,100098352,100097365,100095667,100088915,100086275,100084476,100083016,100072672,100059850,100058029,100057346	100142883,100108548,100103951,100102857,100098541,100097505,100095837,100089095,100086358,100084658,100083134,100072813,100060043,100059533,100057746	Gene ID= ENSG00000111647.12 TPM= 3.5 Transcript Type= NA
chr12	100037076	100142848	100037076	100142848	-	ENST00000279907.11@UHRF1BP1L	ENST00000279907.11	protein_coding	100142592,100108386,100103913,100102766,100098352,100097365,100095667,100088915,100086275,100084476,100083016,100072672,100059850,100058029,100057571,100051079,100050168,100047943,100047530,100039596,100037076	100142848,100108548,100103951,100102857,100098541,100097505,100095837,100089095,100086358,100084658,100083134,100072813,100060043,100059533,100057746,100051221,100050318,100048196,100047638,100039789,100037755	Gene ID= ENSG00000111647.12 TPM= 5.84 Transcript Type= protein_coding
chr12	100069908	100142847	100069908	100142847	-	ENST00000356828.7@UHRF1BP1L	ENST00000356828.7	protein_coding	100142592,100108386,100103913,100102766,100098352,100097365,100095667,100088915,100086275,100084476,100083016,100072672,100069908	100142847,100108548,100103951,100102857,100098541,100097505,100095837,100089095,100086358,100084658,100083134,100072813,100070169	Gene ID= ENSG00000111647.12 TPM= 2.34 Transcript Type= protein_coding
chr12	100156417	100159848	100156417	100159848	-	transcript5038.chr12.nic@GOLGA2P5	transcript5038.chr12.nic	transcribed_unprocessed_pseudogene	100158958,100158798,100157997,100157528,100157165,100156417	100159848,100158873,100158077,100157739,100157445,100157058	Gene ID= ENSG00000238105.7 TPM= 3.5 Transcript Type= NA
chr12	100200087	100224423	100200087	100224423	+	ENST00000188312.6@ACTR6	ENST00000188312.6	protein_coding	100200087,100204940,100205676,100207663,100210073,100210295,100212256,100212450,100218415,100220008,100223786	100200919,100205057,100205744,100207786,100210208,100210351,100212354,100212528,100218586,100220146,100224423	Gene ID= ENSG00000075089.9 TPM= 22.57 Transcript Type= protein_coding
chr12	100200806	100224424	100200806	100224424	+	transcript5043.chr12.nic@ACTR6	transcript5043.chr12.nic	protein_coding	100200806,100204940,100205676,100207663,100210073,100210295,100212256,100212450,100218415,100220008,100223786	100201060,100205057,100205757,100207786,100210208,100210351,100212354,100212528,100218586,100220146,100224424	Gene ID= ENSG00000075089.9 TPM= 2.72 Transcript Type= NA
chr12	100200816	100224424	100200816	100224424	+	ENST00000546902.5@ACTR6	ENST00000546902.5	protein_coding	100200816,100204940,100205676,100207663,100210073,100210295,100212256,100212450,100218415,100220008,100223786	100201060,100205057,100205744,100207786,100210208,100210351,100212354,100212528,100218586,100220146,100224424	Gene ID= ENSG00000075089.9 TPM= 3.89 Transcript Type= protein_coding
chr12	100267384	100341724	100267384	100341724	+	ENST00000360820.6@SCYL2	ENST00000360820.6	protein_coding	100267384,100282943,100291503,100298031,100311044,100312432,100313422,100314489,100315558,100317803,100323525,100326622,100329201,100334166,100335625,100335811,100337387,100338528	100267792,100283147,100291660,100298175,100311193,100312653,100313538,100314614,100315734,100317925,100323638,100326754,100329319,100334266,100335691,100335906,100337506,100341724	Gene ID= ENSG00000136021.18 TPM= 14.01 Transcript Type= protein_coding
chr12	100267246	100340139	100267246	100340139	+	ENST00000635101.1@SCYL2	ENST00000635101.1	protein_coding	100267246,100282943,100291503,100298031,100311044,100312432,100313422,100314489,100315558,100317681,100317803,100323525,100326622,100329201,100334166,100335625,100335811,100337387,100338528	100267396,100283147,100291660,100298175,100311193,100312653,100313538,100314614,100315734,100317692,100317925,100323638,100326754,100329319,100334266,100335691,100335906,100337506,100340139	Gene ID= ENSG00000136021.18 TPM= 7.01 Transcript Type= protein_coding
chr12	100573680	100577508	100573680	100577508	+	transcript5059.chr12.nnic@GAS2L3	transcript5059.chr12.nnic	protein_coding	100573680,100574347	100573785,100577508	Gene ID= ENSG00000139354.10 TPM= 12.84 Transcript Type= NA
chr12	101155493	101210407	101155493	101210407	-	ENST00000536262.2@SLC5A8	ENST00000536262.2	protein_coding	101209498,101204500,101202164,101195095,101193625,101190468,101187386,101184134,101182803,101180029,101168096,101166494,101161974,101158249,101155493	101210407,101204565,101202215,101195162,101193779,101190608,101187515,101184222,101182915,101180096,101168182,101166699,101162077,101158328,101157401	Gene ID= ENSG00000256870.2 TPM= 1.17 Transcript Type= protein_coding
chr12	101186081	101210238	101186081	101210238	-	transcript5061.chr12.nic@SLC5A8	transcript5061.chr12.nic	protein_coding	101209498,101204500,101202164,101195095,101193625,101190468,101186081	101210238,101204565,101202215,101195162,101193779,101190608,101187515	Gene ID= ENSG00000256870.2 TPM= 3.5 Transcript Type= NA
chr12	101393120	101407820	101393120	101407820	-	ENST00000261636.12@ARL1	ENST00000261636.12	protein_coding	101407642,101405844,101402865,101401062,101396399,101393120	101407820,101405981,101402946,101401173,101396577,101395670	Gene ID= ENSG00000120805.13 TPM= 66.55 Transcript Type= protein_coding
chr12	101697641	101729074	101697641	101729074	+	transcript5087.chr12.nnic@CHPT1	transcript5087.chr12.nnic	protein_coding	101697641,101714090,101714504,101716728,101720123,101723168,101723722,101726294,101728901	101698134,101714237,101714645,101716812,101720254,101723326,101723847,101726497,101729074	Gene ID= ENSG00000111666.10 TPM= 20.23 Transcript Type= NA
chr12	101697627	101729074	101697627	101729074	+	ENST00000229266.7@CHPT1	ENST00000229266.7	protein_coding	101697627,101714090,101714504,101716728,101720123,101723168,101723722,101726294,101728901	101698134,101714237,101714645,101716812,101720254,101723326,101723847,101726404,101729074	Gene ID= ENSG00000111666.10 TPM= 145.95 Transcript Type= protein_coding
chr12	101697672	101727039	101697672	101727039	+	ENST00000549872.5@CHPT1	ENST00000549872.5	protein_coding	101697672,101714090,101714504,101716728,101720123,101723168,101723722,101726294	101698134,101714237,101714645,101716812,101720254,101723326,101723847,101727039	Gene ID= ENSG00000111666.10 TPM= 15.56 Transcript Type= protein_coding
chr12	101697692	101729016	101697692	101729016	+	ENST00000549128.5@CHPT1	ENST00000549128.5	protein_coding	101697692,101714090,101714504,101716728,101720123,101723168,101723722,101726294,101728908	101698134,101714237,101714645,101716812,101720254,101723326,101723847,101726501,101729016	Gene ID= ENSG00000111666.10 TPM= 2.72 Transcript Type= nonsense_mediated_decay
chr12	101735873	101740625	101735873	101740625	-	transcript5102.chr12.nnic@NA	transcript5102.chr12.nnic	NA	101735873	101740625	Gene ID= novel_gene_chr12_5103 TPM= 2.34 Transcript Type= NA
chr12	101756215	101830860	101756215	101830860	-	transcript5077.chr12.nic@GNPTAB	transcript5077.chr12.nic	protein_coding	101830559,101796677,101789938,101788548,101786012,101780557,101780152,101770996,101770406,101770021,101768037,101766091,101764202,101761564,101761127,101760030,101757572,101757212,101756215	101830860,101796762,101790057,101788589,101786217,101780621,101780286,101771157,101770585,101770191,101768160,101766294,101765304,101761763,101761346,101760143,101757657,101757310,101756566	Gene ID= ENSG00000111670.14 TPM= 9.34 Transcript Type= NA
chr12	101765761	101830867	101765761	101830867	-	transcript5082.chr12.nic@GNPTAB	transcript5082.chr12.nic	protein_coding	101830559,101796677,101789938,101788548,101786012,101780557,101780152,101770996,101770406,101770021,101768037,101765761	101830867,101796762,101790057,101788589,101786217,101780621,101780286,101771157,101770585,101770191,101768160,101766294	Gene ID= ENSG00000111670.14 TPM= 2.34 Transcript Type= NA
chr12	101745497	101830938	101745497	101830938	-	ENST00000299314.11@GNPTAB	ENST00000299314.11	protein_coding	101830559,101796677,101789938,101788548,101786012,101780557,101780152,101770996,101770406,101770021,101768037,101766091,101764202,101761564,101761127,101760030,101757572,101757212,101753372,101749101,101745497	101830938,101796762,101790057,101788589,101786217,101780621,101780286,101771157,101770585,101770191,101768160,101766294,101765304,101761763,101761346,101760143,101757657,101757310,101753539,101749191,101747241	Gene ID= ENSG00000111670.14 TPM= 50.21 Transcript Type= protein_coding
chr12	101877290	101923623	101877290	101923623	+	transcript5107.chr12.nnic@DRAM1	transcript5107.chr12.nnic	protein_coding	101877290,101890100,101897863,101901291,101908186,101914174,101920109,101921216	101877920,101890221,101897930,101901433,101908363,101914232,101920201,101923623	Gene ID= ENSG00000136048.13 TPM= 39.7 Transcript Type= NA
chr12	101877527	101923612	101877527	101923612	+	transcript5122.chr12.nnic@DRAM1	transcript5122.chr12.nnic	protein_coding	101877527,101897863,101901291,101908186,101914174,101921216	101877920,101897930,101901433,101908363,101914232,101923612	Gene ID= ENSG00000136048.13 TPM= 32.69 Transcript Type= NA
chr12	101877412	101923623	101877412	101923623	+	transcript5128.chr12.nnic@DRAM1	transcript5128.chr12.nnic	protein_coding	101877412,101897863,101901291,101920109,101921216	101877920,101897930,101901433,101920201,101923623	Gene ID= ENSG00000136048.13 TPM= 19.85 Transcript Type= NA
chr12	101877351	101923623	101877351	101923623	+	ENST00000258534.12@DRAM1	ENST00000258534.12	protein_coding	101877351,101897863,101901291,101908186,101914174,101920109,101921216	101877920,101897930,101901433,101908363,101914232,101920201,101923623	Gene ID= ENSG00000136048.13 TPM= 435.51 Transcript Type= protein_coding
chr12	101915548	101919011	101915548	101919011	-	transcript5136.chr12.nnic@NA	transcript5136.chr12.nnic	NA	101915548	101919011	Gene ID= novel_gene_chr12_5137 TPM= 5.84 Transcript Type= NA
chr12	102012939	102062124	102012939	102062124	-	ENST00000240079.10@WASHC3	ENST00000240079.10	protein_coding	102061912,102061248,102046054,102044105,102039868,102025974,102012939	102062124,102061346,102046119,102044212,102039978,102026038,102013192	Gene ID= ENSG00000120860.10 TPM= 22.77 Transcript Type= protein_coding
chr12	102012944	102062034	102012944	102062034	-	ENST00000535501.5@WASHC3	ENST00000535501.5	protein_coding	102061912,102061248,102050189,102046054,102044105,102039868,102025974,102012944	102062034,102061346,102050291,102046119,102044212,102039975,102026038,102013192	Gene ID= ENSG00000120860.10 TPM= 4.09 Transcript Type= nonsense_mediated_decay
chr12	102073103	102120124	102073103	102120124	-	ENST00000552283.5@NUP37	ENST00000552283.5	protein_coding	102120050,102118363,102112108,102101032,102099106,102085766,102077322,102076797,102075001,102073103	102120124,102118583,102112232,102101104,102099200,102085856,102077503,102076847,102075094,102074467	Gene ID= ENSG00000075188.8 TPM= 1.17 Transcript Type= protein_coding
chr12	102120245	102197520	102120245	102197520	+	ENST00000327680.6@PARPBP	ENST00000327680.6	protein_coding	102120245,102123886,102148230,102153869,102164438,102165729,102175483,102178592,102182549,102195312,102195951	102120286,102124041,102148463,102153976,102164608,102165883,102175666,102178770,102182627,102195447,102197520	Gene ID= ENSG00000185480.11 TPM= 2.34 Transcript Type= protein_coding
chr12	102395874	102480645	102395874	102480645	-	ENST00000337514.10@IGF1	ENST00000337514.10	protein_coding	102480319,102475643,102419509,102395874	102480645,102475799,102419690,102402566	Gene ID= ENSG00000017427.15 TPM= 7.01 Transcript Type= protein_coding
chr12	102417491	102480563	102417491	102480563	-	ENST00000307046.8@IGF1	ENST00000307046.8	protein_coding	102480319,102475643,102419509,102417491	102480563,102475799,102419690,102418003	Gene ID= ENSG00000017427.15 TPM= 1.17 Transcript Type= protein_coding
chr12	103930334	103947926	103930334	103947926	+	ENST00000299767.9@HSP90B1	ENST00000299767.9	protein_coding	103930334,103931521,103932277,103932826,103933956,103937695,103938340,103939509,103941410,103941629,103941832,103942527,103943074,103943738,103946618,103946786,103947311,103947633	103930564,103931623,103932418,103932942,103934287,103937806,103938459,103939625,103941547,103941706,103941897,103942796,103943319,103943874,103946696,103946941,103947430,103947926	Gene ID= ENSG00000166598.14 TPM= 1073.89 Transcript Type= protein_coding
chr12	103930332	103947926	103930332	103947926	+	transcript5167.chr12.nic@HSP90B1	transcript5167.chr12.nic	protein_coding	103930332,103931521,103932277,103932826,103933956,103937695,103938340,103939509,103941410,103941629,103941832,103942527,103943074,103946618,103946786,103947311,103947633	103930564,103931623,103932418,103932942,103934287,103937806,103938459,103939625,103941547,103941706,103941897,103942796,103943874,103946696,103946941,103947430,103947926	Gene ID= ENSG00000166598.14 TPM= 47.58 Transcript Type= NA
chr12	103930334	103938779	103930334	103938779	+	ENST00000640977.1@HSP90B1	ENST00000640977.1	protein_coding	103930334,103931521,103932277,103932826,103933956,103937695,103938340,103938773	103930564,103931623,103932418,103932942,103934287,103937806,103938422,103938779	Gene ID= ENSG00000166598.14 TPM= 15.47 Transcript Type= protein_coding
chr12	103950207	103957264	103950207	103957264	-	ENST00000378090.8@C12orf73	ENST00000378090.8	protein_coding	103957069,103956631,103950207	103957264,103956748,103951630	Gene ID= ENSG00000204954.9 TPM= 2.34 Transcript Type= protein_coding
chr12	103950745	103957190	103950745	103957190	-	ENST00000549478.1@C12orf73	ENST00000549478.1	protein_coding	103956631,103950745	103957190,103951630	Gene ID= ENSG00000204954.9 TPM= 1.17 Transcript Type= protein_coding
chr12	103950740	103957181	103950740	103957181	-	ENST00000547975.5@C12orf73	ENST00000547975.5	protein_coding	103957069,103956631,103953414,103950740	103957181,103956748,103953534,103951630	Gene ID= ENSG00000204954.9 TPM= 1.17 Transcript Type= protein_coding
chr12	103965804	103988874	103965804	103988874	+	ENST00000392872.7@TDG	ENST00000392872.7	protein_coding	103965804,103976918,103979831,103980893,103982799,103983136,103983295,103984749,103985603,103986948	103966060,103977060,103980072,103980962,103982934,103983218,103983389,103984920,103985728,103988874	Gene ID= ENSG00000139372.14 TPM= 7.01 Transcript Type= protein_coding
chr12	103988989	104050187	103988989	104050187	-	transcript5186.chr12.nic@GLT8D2	transcript5186.chr12.nic	protein_coding	104049895,104019630,104015013,104003135,103999397,103997451,103996735,103994335,103993392,103988989	104050187,104019676,104015105,104003306,103999514,103997535,103996847,103994501,103993504,103989577	Gene ID= ENSG00000120820.12 TPM= 3.5 Transcript Type= NA
chr12	103989280	104064183	103989280	104064183	-	ENST00000548660.5@GLT8D2	ENST00000548660.5	protein_coding	104063949,104049895,104019630,104015013,104003135,103999397,103997451,103996735,103994335,103993392,103989280	104064183,104050288,104019676,104015105,104003306,103999514,103997535,103996847,103994501,103993504,103989577	Gene ID= ENSG00000120820.12 TPM= 1.17 Transcript Type= protein_coding
chr12	103988984	104050137	103988984	104050137	-	ENST00000360814.8@GLT8D2	ENST00000360814.8	protein_coding	104049895,104021357,104019630,104015013,104003135,103999397,103997451,103996735,103994335,103993392,103988984	104050137,104021491,104019676,104015105,104003306,103999514,103997535,103996847,103994501,103993504,103989577	Gene ID= ENSG00000120820.12 TPM= 9.34 Transcript Type= protein_coding
chr12	104064457	104106524	104064457	104106524	+	ENST00000229330.8@HCFC2	ENST00000229330.8	protein_coding	104064457,104066167,104067947,104079445,104080746,104082500,104082713,104086847,104087986,104093386,104095360,104096360,104098343,104101968,104102959	104064723,104066315,104068107,104079653,104080830,104082606,104082901,104087014,104088038,104093563,104095563,104096433,104098480,104102153,104106524	Gene ID= ENSG00000111727.11 TPM= 19.85 Transcript Type= protein_coding
chr12	104117783	104138202	104117783	104138202	-	transcript5209.chr12.nic@NFYB	transcript5209.chr12.nic	protein_coding	104138141,104135448,104131754,104128424,104126114,104123226,104121240,104120400,104117783	104138202,104135532,104131838,104128517,104126244,104123423,104121321,104120479,104119769	Gene ID= ENSG00000120837.7 TPM= 2.34 Transcript Type= NA
chr12	104119355	104138102	104119355	104138102	-	transcript5214.chr12.nnic@NFYB	transcript5214.chr12.nnic	protein_coding	104137345,104135448,104131754,104128424,104126114,104123226,104121240,104120400,104119355	104138102,104135532,104131838,104128517,104126244,104123423,104121321,104120479,104119769	Gene ID= ENSG00000120837.7 TPM= 2.34 Transcript Type= NA
chr12	104119355	104137994	104119355	104137994	-	transcript5215.chr12.nic@NFYB	transcript5215.chr12.nic	protein_coding	104137376,104135448,104131754,104128424,104126114,104123226,104121240,104120400,104119355	104137994,104135532,104131838,104128517,104126244,104123423,104121321,104120479,104119769	Gene ID= ENSG00000120837.7 TPM= 3.5 Transcript Type= NA
chr12	104118091	104138102	104118091	104138102	-	transcript5222.chr12.nnic@NFYB	transcript5222.chr12.nnic	protein_coding	104137345,104135448,104128424,104126114,104123226,104121240,104120400,104118091	104138102,104135532,104128517,104126244,104123423,104121321,104120479,104119769	Gene ID= ENSG00000120837.7 TPM= 2.34 Transcript Type= NA
chr12	104117077	104138289	104117077	104138289	-	ENST00000240055.7@NFYB	ENST00000240055.7	protein_coding	104138141,104135448,104128424,104126114,104123226,104121240,104120400,104117077	104138289,104135532,104128517,104126244,104123423,104121321,104120479,104119769	Gene ID= ENSG00000120837.7 TPM= 4.67 Transcript Type= protein_coding
chr12	104119355	104138017	104119355	104138017	-	ENST00000551727.5@NFYB	ENST00000551727.5	protein_coding	104137376,104135448,104128424,104126114,104123226,104121240,104120400,104119355	104138017,104135532,104128517,104126244,104123423,104121321,104120479,104119769	Gene ID= ENSG00000120837.7 TPM= 8.17 Transcript Type= protein_coding
chr12	104286881	104350283	104286881	104350283	+	ENST00000526691.5@TXNRD1	ENST00000526691.5	protein_coding	104286881,104288931,104311290,104313245,104315777,104318913,104319470,104321091,104325337,104326347,104327515,104331534,104334237,104339139,104348353	104287346,104289040,104311412,104313317,104315896,104319055,104319585,104321316,104325429,104326423,104327671,104331641,104334332,104339273,104350283	Gene ID= ENSG00000198431.15 TPM= 57.76 Transcript Type= protein_coding
chr12	104286952	104350283	104286952	104350283	+	transcript5254.chr12.nic@TXNRD1	transcript5254.chr12.nic	protein_coding	104286952,104311290,104313245,104315777,104318913,104319470,104321091,104325337,104326347,104327515,104331534,104334237,104339139,104348353	104287346,104311412,104313317,104315896,104319055,104319585,104321316,104325429,104326423,104327671,104331641,104334332,104339273,104350283	Gene ID= ENSG00000198431.15 TPM= 28.37 Transcript Type= NA
chr12	104286986	104350283	104286986	104350283	+	transcript5255.chr12.nic@TXNRD1	transcript5255.chr12.nic	protein_coding	104286986,104311290,104313245,104315777,104318913,104319470,104321091,104325337,104326347,104327515,104331534,104334237,104339139,104348353	104287109,104311412,104313317,104315896,104319055,104319585,104321316,104325429,104326423,104327671,104331641,104334332,104339273,104350283	Gene ID= ENSG00000198431.15 TPM= 28.37 Transcript Type= NA
chr12	104288866	104350283	104288866	104350283	+	transcript5257.chr12.nic@TXNRD1	transcript5257.chr12.nic	protein_coding	104288866,104311290,104313245,104315777,104318913,104319470,104321091,104325337,104326347,104327515,104331534,104334237,104339139,104348353	104289040,104311412,104313317,104315896,104319055,104319585,104321316,104325429,104326423,104327671,104331641,104334332,104339273,104350283	Gene ID= ENSG00000198431.15 TPM= 30.91 Transcript Type= NA
chr12	104286682	104350277	104286682	104350277	+	ENST00000503506.6@TXNRD1	ENST00000503506.6	protein_coding	104286682,104288931,104311290,104313245,104315777,104318913,104319470,104321091,104325337,104326347,104327515,104331534,104334237,104339139,104348353	104287109,104289040,104311412,104313317,104315896,104319055,104319585,104321316,104325429,104326423,104327671,104331641,104334332,104339273,104350277	Gene ID= ENSG00000198431.15 TPM= 99.79 Transcript Type= protein_coding
chr12	104265309	104265836	104265309	104265836	+	ENST00000462885.1@RPL18AP3	ENST00000462885.1	processed_pseudogene	104265309	104265836	Gene ID= ENSG00000213442.5 TPM= 18.68 Transcript Type= processed_pseudogene
chr12	104303739	104305205	104303739	104305205	+	ENST00000527879.2@EID3	ENST00000527879.2	protein_coding	104303739	104305205	Gene ID= ENSG00000255150.2 TPM= 1.17 Transcript Type= protein_coding
chr12	104601452	104758098	104601452	104758098	+	transcript5266.chr12.nnic@CHST11	transcript5266.chr12.nnic	protein_coding	104601452,104601906,104756949	104601609,104601991,104758098	Gene ID= ENSG00000171310.10 TPM= 5.84 Transcript Type= NA
chr12	104457787	104460165	104457787	104460165	-	transcript5272.chr12.nnic@NA	transcript5272.chr12.nnic	NA	104457787	104460165	Gene ID= novel_gene_chr12_5273 TPM= 19.85 Transcript Type= NA
chr12	104491023	104492438	104491023	104492438	-	transcript5274.chr12.nnic@NA	transcript5274.chr12.nnic	NA	104491023	104492438	Gene ID= novel_gene_chr12_5275 TPM= 2.34 Transcript Type= NA
chr12	104618226	104623535	104618226	104623535	-	transcript5270.chr12.nnic@NA	transcript5270.chr12.nnic	NA	104618226	104623535	Gene ID= novel_gene_chr12_5271 TPM= 25.69 Transcript Type= NA
chr12	104802553	104958577	104802553	104958577	-	transcript5278.chr12.nic@SLC41A2	transcript5278.chr12.nic	protein_coding	104958088,104927973,104909655,104895274,104889033,104886293,104866432,104861291,104845843,104844472,104802553	104958577,104928694,104909762,104895345,104889177,104886439,104866579,104861370,104845974,104844620,104805337	Gene ID= ENSG00000136052.9 TPM= 17.51 Transcript Type= NA
chr12	104802553	104958327	104802553	104958327	-	transcript5279.chr12.nic@SLC41A2	transcript5279.chr12.nic	protein_coding	104958190,104927973,104909655,104895274,104889033,104886293,104866432,104861291,104845843,104844472,104802553	104958327,104928694,104909762,104895345,104889177,104886439,104866579,104861370,104845974,104844620,104805337	Gene ID= ENSG00000136052.9 TPM= 21.02 Transcript Type= NA
chr12	104844144	104958289	104844144	104958289	-	transcript5283.chr12.nic@SLC41A2	transcript5283.chr12.nic	protein_coding	104958088,104927973,104909655,104895274,104889033,104886293,104866432,104861291,104845843,104844144	104958289,104928694,104909762,104895345,104889177,104886439,104866579,104861370,104845974,104844620	Gene ID= ENSG00000136052.9 TPM= 2.34 Transcript Type= NA
chr12	105107707	105164718	105107707	105164718	+	transcript5295.chr12.nic@WASHC4	transcript5295.chr12.nic	protein_coding	105107707,105111125,105114216,105114362,105115184,105115661,105118446,105120555,105121101,105122118,105126004,105126235,105127129,105133770,105137886,105140294,105140899,105141167,105142453,105143127,105144287,105144718,105146452,105147042,105149615,105152343,105156726,105157236,105160001,105162749,105164111,105164641	105107861,105111264,105114269,105114427,105115229,105115728,105118528,105120597,105121204,105122238,105126127,105126362,105127289,105133896,105138011,105140401,105141045,105141246,105142558,105143243,105144455,105144872,105146526,105147146,105149749,105152451,105156792,105157322,105160148,105162845,105164307,105164718	Gene ID= ENSG00000136051.13 TPM= 3.5 Transcript Type= NA
chr12	105107768	105169130	105107768	105169130	+	transcript5297.chr12.nic@WASHC4	transcript5297.chr12.nic	protein_coding	105107768,105114216,105114362,105115184,105115661,105118446,105120555,105121101,105122118,105126004,105126235,105127129,105133770,105137886,105140294,105140899,105141167,105142453,105143127,105144287,105144718,105146452,105147042,105149615,105152343,105156726,105157236,105160001,105162749,105164111,105164641,105166864	105107861,105114269,105114427,105115229,105115728,105118528,105120597,105121204,105122238,105126127,105126362,105127289,105133896,105138011,105140401,105141045,105141246,105142558,105143243,105144455,105144872,105146526,105147146,105149749,105152451,105156792,105157322,105160148,105162845,105164307,105164740,105169130	Gene ID= ENSG00000136051.13 TPM= 7.01 Transcript Type= NA
chr12	105107714	105169126	105107714	105169126	+	ENST00000620430.4@WASHC4	ENST00000620430.4	protein_coding	105107714,105111125,105114216,105114362,105115184,105115661,105118446,105120555,105121101,105122118,105126004,105126235,105127129,105133770,105137886,105140294,105140899,105141167,105142453,105143127,105144287,105144718,105146452,105147042,105149615,105152343,105156726,105157236,105160001,105162749,105164111,105164641,105166864	105107861,105111264,105114269,105114427,105115229,105115728,105118528,105120597,105121204,105122238,105126127,105126362,105127289,105133899,105138011,105140401,105141045,105141246,105142558,105143243,105144455,105144872,105146526,105147146,105149749,105152451,105156792,105157322,105160148,105162845,105164307,105164740,105169126	Gene ID= ENSG00000136051.13 TPM= 3.5 Transcript Type= protein_coding
chr12	105107715	105169130	105107715	105169130	+	ENST00000550053.5@WASHC4	ENST00000550053.5	protein_coding	105107715,105111125,105114216,105114362,105115184,105115661,105118446,105120555,105121089,105122118,105126004,105126235,105127129,105133770,105137886,105140294,105140899,105141167,105142453,105143127,105144287,105144718,105146452,105147042,105149615,105152343,105156726,105157236,105160001,105162749,105164111,105164641,105166864	105107861,105111264,105114269,105114427,105115229,105115728,105118528,105120597,105121204,105122238,105126127,105126362,105127289,105133896,105138011,105140401,105141045,105141246,105142558,105143243,105144455,105144872,105146526,105147146,105149749,105152451,105156792,105157322,105160148,105162845,105164307,105164740,105169130	Gene ID= ENSG00000136051.13 TPM= 7.01 Transcript Type= nonsense_mediated_decay
chr12	105173297	105236146	105173297	105236146	-	transcript5312.chr12.nnic@APPL2	transcript5312.chr12.nnic	protein_coding	105235959,105229125,105217666,105217069,105211230,105208158,105207971,105207061,105203703,105197765,105195585,105195445,105195261,105189991,105189772,105188273,105177226,105176876,105176035,105173297	105236146,105229223,105217725,105217140,105211317,105208199,105208029,105207207,105203785,105197953,105195627,105195501,105195349,105190155,105189824,105188447,105177262,105177016,105176082,105174448	Gene ID= ENSG00000136044.11 TPM= 2.34 Transcript Type= NA
chr12	105173297	105236146	105173297	105236146	-	transcript5313.chr12.nnic@APPL2	transcript5313.chr12.nnic	protein_coding	105235959,105229125,105217666,105217069,105211230,105208158,105207971,105207061,105203703,105199373,105197765,105195585,105195445,105195261,105189991,105189772,105188273,105177226,105176035,105173297	105236146,105229223,105217725,105217140,105211317,105208199,105208029,105207207,105203785,105199531,105197953,105195627,105195501,105195349,105190155,105189824,105188447,105177262,105176082,105174448	Gene ID= ENSG00000136044.11 TPM= 4.67 Transcript Type= NA
chr12	105194888	105236117	105194888	105236117	-	transcript5318.chr12.nnic@APPL2	transcript5318.chr12.nnic	protein_coding	105235959,105229125,105217666,105217069,105211230,105208158,105207971,105207061,105203703,105199373,105197765,105195585,105195445,105195261,105194888	105236117,105229223,105217725,105217140,105211317,105208199,105208029,105207207,105203785,105199531,105197953,105195627,105195501,105195349,105195154	Gene ID= ENSG00000136044.11 TPM= 2.34 Transcript Type= NA
chr12	105173296	105236238	105173296	105236238	-	ENST00000258530.7@APPL2	ENST00000258530.7	protein_coding	105235959,105229125,105217666,105217069,105211230,105208158,105207971,105207061,105203703,105199373,105197765,105195585,105195445,105195261,105189991,105189772,105188273,105177226,105176876,105176035,105173296	105236238,105229223,105217725,105217140,105211317,105208199,105208029,105207207,105203785,105199531,105197953,105195627,105195501,105195349,105190155,105189824,105188447,105177262,105177016,105176082,105174448	Gene ID= ENSG00000136044.11 TPM= 70.06 Transcript Type= protein_coding
chr12	105330636	105371518	105330636	105371518	+	ENST00000443585.5@C12orf75	ENST00000443585.5	protein_coding	105330636,105348602,105365807,105366617,105367472,105370634	105330937,105348626,105365842,105366696,105367509,105371518	Gene ID= ENSG00000235162.8 TPM= 9.34 Transcript Type= protein_coding
chr12	105840197	105844457	105840197	105844457	-	transcript5332.chr12.nnic@NA	transcript5332.chr12.nnic	NA	105840197	105844457	Gene ID= novel_gene_chr12_5333 TPM= 2.34 Transcript Type= NA
chr12	106063340	106140033	106063340	106140033	-	ENST00000261402.6@NUAK1	ENST00000261402.6	protein_coding	106138414,106106405,106086734,106083864,106072724,106070774,106063340	106140033,106106525,106086885,106083929,106072843,106070906,106067955	Gene ID= ENSG00000074590.13 TPM= 39.7 Transcript Type= protein_coding
chr12	106237877	106247999	106237877	106247999	-	transcript5342.chr12.nnic@CKAP4	transcript5342.chr12.nnic	protein_coding	106247861,106247369,106237877	106247999,106247569,106240349	Gene ID= ENSG00000136026.13 TPM= 4.67 Transcript Type= NA
chr12	106237877	106247988	106237877	106247988	-	ENST00000378026.4@CKAP4	ENST00000378026.4	protein_coding	106247369,106237877	106247988,106240349	Gene ID= ENSG00000136026.13 TPM= 50.21 Transcript Type= protein_coding
chr12	106302734	106335814	106302734	106335814	+	transcript5367.chr12.nic@TCP11L2	transcript5367.chr12.nic	protein_coding	106302734,106311041,106314358,106318344,106321486,106323510,106335639	106302941,106311232,106314493,106318464,106321706,106323646,106335814	Gene ID= ENSG00000166046.10 TPM= 2.34 Transcript Type= NA
chr12	106302818	106325913	106302818	106325913	+	ENST00000546625.5@TCP11L2	ENST00000546625.5	protein_coding	106302818,106311041,106314358,106318344,106321486,106323510	106302941,106311232,106314493,106318464,106321706,106325913	Gene ID= ENSG00000166046.10 TPM= 1.17 Transcript Type= protein_coding
chr12	106357658	106510198	106357658	106510198	+	ENST00000228347.8@POLR3B	ENST00000228347.8	protein_coding	106357658,106363870,106366516,106366658,106369275,106369583,106376359,106378267,106380031,106393031,106405857,106410826,106427197,106430273,106432318,106433719,106437057,106437681,106444463,106454502,106457138,106459251,106463478,106496055,106496752,106501323,106504081,106509420	106357951,106363902,106366572,106366722,106369350,106369683,106376450,106378384,106380139,106393153,106405976,106410960,106427358,106430473,106432480,106433872,106437131,106437779,106444590,106454711,106457296,106459368,106463620,106496158,106496918,106501436,106504254,106510198	Gene ID= ENSG00000013503.9 TPM= 10.51 Transcript Type= protein_coding
chr12	106954029	106955497	106954029	106955497	-	ENST00000570282.1@AC007541.1	ENST00000570282.1	antisense_RNA	106954029	106955497	Gene ID= ENSG00000260329.1 TPM= 1.17 Transcript Type= antisense_RNA
chr12	106955719	106974036	106955719	106974036	+	ENST00000548125.5@TMEM263	ENST00000548125.5	protein_coding	106955719,106967111,106971105	106956065,106967180,106974036	Gene ID= ENSG00000151135.9 TPM= 21.02 Transcript Type= protein_coding
chr12	106955722	106973984	106955722	106973984	+	ENST00000280756.8@TMEM263	ENST00000280756.8	protein_coding	106955722,106957082,106967111,106971105	106956065,106957149,106967180,106973984	Gene ID= ENSG00000151135.9 TPM= 19.85 Transcript Type= protein_coding
chr12	106977291	106987166	106977291	106987166	-	ENST00000240050.8@MTERF2	ENST00000240050.8	protein_coding	106986969,106985115,106977291	106987166,106985225,106978771	Gene ID= ENSG00000120832.9 TPM= 7.01 Transcript Type= protein_coding
chr12	106977549	106987126	106977549	106987126	-	ENST00000552029.1@MTERF2	ENST00000552029.1	protein_coding	106985115,106977549	106987126,106978771	Gene ID= ENSG00000120832.9 TPM= 18.68 Transcript Type= protein_coding
chr12	106991364	107093547	106991364	107093547	-	transcript5397.chr12.nic@CRY1	transcript5397.chr12.nic	protein_coding	107092804,107022084,107005106,107001764,107001280,106999551,106997915,106997488,106997294,106992965,106992787,106991364	107093547,107022192,107005248,107001948,107001368,107000082,106998066,106997690,106997386,106993036,106992890,106992001	Gene ID= ENSG00000008405.11 TPM= 3.5 Transcript Type= NA
chr12	106991364	107093566	106991364	107093566	-	transcript5398.chr12.nic@CRY1	transcript5398.chr12.nic	protein_coding	107092804,107022084,107005106,107001764,107001280,106999942,106999551,106997915,106997488,106997294,106992787,106991364	107093566,107022192,107005248,107001948,107001368,107000082,106999862,106998066,106997690,106997386,106993036,106992001	Gene ID= ENSG00000008405.11 TPM= 2.34 Transcript Type= NA
chr12	106991364	107093851	106991364	107093851	-	transcript5399.chr12.nic@CRY1	transcript5399.chr12.nic	protein_coding	107092804,107022084,107005106,107001764,107001280,106999942,106999551,106997915,106997488,106997294,106992965,106991364	107093851,107022192,107005248,107001948,107001368,107000082,106999862,106998066,106997690,106997386,106993036,106992890	Gene ID= ENSG00000008405.11 TPM= 7.01 Transcript Type= NA
chr12	107685732	107713167	107685732	107713167	+	ENST00000412830.7@PWP1	ENST00000412830.7	protein_coding	107685732,107688448,107688615,107692814,107693000,107696474,107697467,107699373,107702935,107703685,107704636,107708926,107709111,107710405,107712111	107685971,107688506,107688802,107692899,107693096,107696584,107697597,107699434,107703031,107703746,107704747,107709016,107709232,107710510,107713167	Gene ID= ENSG00000136045.11 TPM= 65.39 Transcript Type= protein_coding
chr12	107732866	107760936	107732866	107760936	-	transcript5423.chr12.nic@PRDM4	transcript5423.chr12.nic	protein_coding	107760505,107756832,107753924,107751415,107746275,107744543,107743197,107742221,107740946,107739383,107732866	107760936,107756965,107754109,107752209,107746424,107744661,107743282,107742348,107741260,107739551,107734522	Gene ID= ENSG00000110851.11 TPM= 2.34 Transcript Type= NA
chr12	107732866	107761160	107732866	107761160	-	ENST00000228437.9@PRDM4	ENST00000228437.9	protein_coding	107760957,107760505,107756832,107753924,107751415,107746275,107744543,107743197,107742221,107740946,107739383,107732866	107761160,107760771,107756965,107754109,107752209,107746424,107744661,107743282,107742348,107741260,107739551,107734522	Gene ID= ENSG00000110851.11 TPM= 35.03 Transcript Type= protein_coding
chr12	108288044	108339317	108288044	108339317	-	ENST00000312143.11@CMKLR1	ENST00000312143.11	protein_coding	108339027,108293589,108288044	108339317,108293664,108292959	Gene ID= ENSG00000174600.13 TPM= 11.68 Transcript Type= protein_coding
chr12	108515185	108521210	108515185	108521210	+	ENST00000552695.5@FICD	ENST00000552695.5	protein_coding	108515185,108516915,108518400	108515361,108517273,108521210	Gene ID= ENSG00000198855.6 TPM= 45.54 Transcript Type= protein_coding
chr12	108522214	108561193	108522214	108561193	-	transcript5438.chr12.nic@SART3	transcript5438.chr12.nic	protein_coding	108560843,108549088,108547887,108545139,108544427,108543028,108538934,108538065,108537488,108536708,108536514,108535359,108532222,108531204,108530142,108526099,108525457,108524316,108522214	108561193,108549214,108547991,108545323,108544532,108543152,108539089,108538203,108537595,108536785,108536572,108535468,108532334,108531280,108530310,108526553,108525609,108524506,108523634	Gene ID= ENSG00000075856.11 TPM= 4.67 Transcript Type= NA
chr12	108522580	108561389	108522580	108561389	-	ENST00000228284.7@SART3	ENST00000228284.7	protein_coding	108560843,108549088,108547887,108545139,108544427,108543028,108538934,108538065,108537488,108536708,108536514,108535359,108532222,108531204,108530142,108526099,108525457,108524316,108522580	108561389,108549214,108547991,108545323,108544478,108543152,108539089,108538203,108537595,108536785,108536572,108535468,108532334,108531280,108530310,108526553,108525609,108524506,108523634	Gene ID= ENSG00000075856.11 TPM= 8.17 Transcript Type= protein_coding
chr12	108522708	108561193	108522708	108561193	-	transcript5443.chr12.nic@SART3	transcript5443.chr12.nic	protein_coding	108560843,108549088,108547887,108545139,108544427,108543028,108542770,108538934,108537488,108536708,108536514,108535359,108532222,108531204,108530142,108526099,108525457,108524316,108522708	108561193,108549214,108547991,108545323,108544478,108543152,108542851,108539089,108538203,108536785,108536572,108535468,108532334,108531280,108530310,108526553,108525609,108524506,108523634	Gene ID= ENSG00000075856.11 TPM= 2.34 Transcript Type= NA
chr12	108522708	108561161	108522708	108561161	-	ENST00000546728.5@SART3	ENST00000546728.5	protein_coding	108560843,108549088,108547887,108545139,108544427,108543028,108538945,108538065,108537488,108536708,108536514,108535359,108532222,108531204,108530142,108526099,108525457,108524316,108522708	108561161,108549214,108547991,108545323,108544478,108543152,108539089,108538203,108537595,108536785,108536572,108535468,108532334,108531280,108530310,108526553,108525609,108524506,108523634	Gene ID= ENSG00000075856.11 TPM= 24.52 Transcript Type= nonsense_mediated_decay
chr12	108530584	108534520	108530584	108534520	+	transcript5450.chr12.nnic@NA	transcript5450.chr12.nnic	NA	108530584	108534520	Gene ID= novel_gene_chr12_5451 TPM= 2.34 Transcript Type= NA
chr12	108562606	108569368	108562606	108569368	+	ENST00000392807.8@ISCU	ENST00000392807.8	protein_coding	108562606,108564060,108564279,108565321,108567190,108568831	108562736,108564155,108564392,108565431,108567268,108569368	Gene ID= ENSG00000136003.15 TPM= 8.17 Transcript Type= protein_coding
chr12	108562582	108569341	108562582	108569341	+	ENST00000545932.5@ISCU	ENST00000545932.5	protein_coding	108562582,108565321,108567190,108567658	108564392,108565431,108567268,108569341	Gene ID= ENSG00000136003.15 TPM= 1.17 Transcript Type= retained_intron
chr12	108562583	108569368	108562583	108569368	+	transcript5457.chr12.nic@ISCU	transcript5457.chr12.nic	protein_coding	108562583,108565321,108567190,108568831	108564392,108565431,108567268,108569368	Gene ID= ENSG00000136003.15 TPM= 24.52 Transcript Type= NA
chr12	108562601	108569384	108562601	108569384	+	ENST00000311893.13@ISCU	ENST00000311893.13	protein_coding	108562601,108564279,108565321,108567190,108568831	108562736,108564392,108565431,108567268,108569384	Gene ID= ENSG00000136003.15 TPM= 180.98 Transcript Type= protein_coding
chr12	108589846	108598124	108589846	108598124	-	ENST00000392806.3@TMEM119	ENST00000392806.3	protein_coding	108597970,108589846	108598124,108592397	Gene ID= ENSG00000183160.8 TPM= 128.44 Transcript Type= protein_coding
chr12	108622277	108633902	108622277	108633902	-	transcript5467.chr12.nic@SELPLG	transcript5467.chr12.nic	protein_coding	108633740,108623918,108622277	108633902,108624312,108623887	Gene ID= ENSG00000110876.9 TPM= 47.87 Transcript Type= NA
chr12	108622277	108633959	108622277	108633959	-	ENST00000550948.1@SELPLG	ENST00000550948.1	protein_coding	108633740,108622277	108633959,108624312	Gene ID= ENSG00000110876.9 TPM= 40.87 Transcript Type= protein_coding
chr12	108645109	108731596	108645109	108731596	-	ENST00000261401.7@CORO1C	ENST00000261401.7	protein_coding	108731429,108701124,108678272,108662029,108658738,108657304,108654306,108652272,108648963,108648605,108645109	108731596,108701323,108678394,108662158,108658919,108657423,108654410,108652417,108649020,108648850,108647522	Gene ID= ENSG00000110880.10 TPM= 166.18 Transcript Type= protein_coding
chr12	108663698	108669688	108663698	108669688	+	transcript5488.chr12.nnic@NA	transcript5488.chr12.nnic	NA	108663698	108669688	Gene ID= novel_gene_chr12_5489 TPM= 10.51 Transcript Type= NA
chr12	109052570	109088023	109052570	109088023	+	transcript5497.chr12.nic@USP30	transcript5497.chr12.nic	protein_coding	109052570,109056682,109067524,109071612,109072305,109073438,109081334,109081933,109082663,109082843,109084953,109085667	109052761,109056791,109067627,109071710,109072350,109073532,109081393,109082019,109082743,109083062,109085073,109088023	Gene ID= ENSG00000135093.12 TPM= 5.45 Transcript Type= NA
chr12	109052576	109088023	109052576	109088023	+	transcript5498.chr12.nic@USP30	transcript5498.chr12.nic	protein_coding	109052576,109067524,109071612,109072305,109073438,109081334,109081933,109082663,109082843,109084953,109085667	109052761,109067627,109071710,109072350,109073532,109081393,109082019,109082743,109083062,109085073,109088023	Gene ID= ENSG00000135093.12 TPM= 3.12 Transcript Type= NA
chr12	109052586	109088026	109052586	109088026	+	ENST00000257548.9@USP30	ENST00000257548.9	protein_coding	109052586,109056682,109057926,109067524,109071612,109072305,109073438,109081334,109081933,109082663,109082843,109084953,109085667	109052761,109056791,109058108,109067627,109071710,109072350,109073532,109081393,109082019,109082743,109083062,109085073,109088026	Gene ID= ENSG00000135093.12 TPM= 20.63 Transcript Type= protein_coding
chr12	109052350	109053952	109052350	109053952	-	ENST00000478808.2@USP30-AS1	ENST00000478808.2	antisense_RNA	109053686,109052350	109053952,109052738	Gene ID= ENSG00000256262.1 TPM= 3.5 Transcript Type= antisense_RNA
chr12	109088188	109093488	109088188	109093488	-	ENST00000619381.4@ALKBH2	ENST00000619381.4	protein_coding	109093350,109092507,109088188	109093488,109092937,109088512	Gene ID= ENSG00000189046.10 TPM= 1.17 Transcript Type= protein_coding
chr12	109088189	109093481	109088189	109093481	-	transcript5504.chr12.nic@ALKBH2	transcript5504.chr12.nic	protein_coding	109092507,109090009,109088189	109093481,109090207,109088512	Gene ID= ENSG00000189046.10 TPM= 7.01 Transcript Type= NA
chr12	109088189	109093472	109088189	109093472	-	ENST00000343075.7@ALKBH2	ENST00000343075.7	protein_coding	109093247,109092507,109090009,109088189	109093472,109092787,109090207,109088512	Gene ID= ENSG00000189046.10 TPM= 2.34 Transcript Type= protein_coding
chr12	109088197	109093459	109088197	109093459	-	ENST00000429722.2@ALKBH2	ENST00000429722.2	protein_coding	109093247,109092507,109090009,109088197	109093459,109092937,109090207,109088512	Gene ID= ENSG00000189046.10 TPM= 5.84 Transcript Type= protein_coding
chr12	109098118	109110975	109098118	109110975	+	ENST00000336865.6@UNG	ENST00000336865.6	protein_coding	109098118,109099189,109101902,109102839,109103433,109109829	109098638,109099284,109101999,109102927,109103611,109110975	Gene ID= ENSG00000076248.10 TPM= 39.7 Transcript Type= protein_coding
chr12	109111197	109112707	109111197	109112707	+	transcript5511.chr12.nnic@NA	transcript5511.chr12.nnic	NA	109111197	109112707	Gene ID= novel_gene_chr12_5512 TPM= 9.34 Transcript Type= NA
chr12	109439833	109442045	109439833	109442045	+	transcript5513.chr12.nnic@NA	transcript5513.chr12.nnic	NA	109439833	109442045	Gene ID= novel_gene_chr12_5514 TPM= 2.34 Transcript Type= NA
chr12	109448656	109477544	109448656	109477544	-	ENST00000228495.10@KCTD10	ENST00000228495.10	protein_coding	109477260,109469515,109460636,109457992,109457630,109456118,109448656	109477544,109469728,109460805,109458078,109457682,109456313,109451813	Gene ID= ENSG00000110906.12 TPM= 78.23 Transcript Type= protein_coding
chr12	109452847	109454653	109452847	109454653	-	transcript5522.chr12.nnic@NA	transcript5522.chr12.nnic	NA	109452847	109454653	Gene ID= novel_gene_chr12_5523 TPM= 2.34 Transcript Type= NA
chr12	109477402	109536705	109477402	109536705	+	ENST00000434735.6@UBE3B	ENST00000434735.6	protein_coding	109477402,109481637,109483531,109483861,109486012,109486471,109488572,109489919,109491045,109497818,109498233,109499633,109501371,109503023,109507564,109509596,109510344,109511204,109516765,109521148,109521441,109523978,109524438,109526358,109529890,109530547,109533466,109534591	109477764,109481742,109483712,109483981,109486071,109486575,109488668,109490004,109491127,109497923,109498353,109499810,109501534,109503190,109507735,109509714,109510458,109511303,109516884,109521324,109521551,109524115,109524503,109526416,109530072,109530658,109533558,109536705	Gene ID= ENSG00000151148.13 TPM= 9.92 Transcript Type= protein_coding
chr12	109477635	109490722	109477635	109490722	+	ENST00000536398.5@UBE3B	ENST00000536398.5	protein_coding	109477635,109481637,109483531,109483861,109486012,109486471,109488572,109489919,109490490	109477764,109481742,109483712,109483981,109486071,109486575,109488668,109490004,109490722	Gene ID= ENSG00000151148.13 TPM= 1.17 Transcript Type= protein_coding
chr12	109477642	109536702	109477642	109536702	+	ENST00000342494.7@UBE3B	ENST00000342494.7	protein_coding	109477642,109481637,109483531,109483861,109486012,109486471,109488572,109489919,109491045,109497818,109498233,109499633,109501371,109503023,109507564,109509596,109510344,109511204,109516765,109521148,109521441,109523978,109524438,109526358,109529890,109530547,109533466,109534591	109478109,109481742,109483712,109483981,109486071,109486575,109488668,109490004,109491127,109497923,109498353,109499810,109501534,109503190,109507735,109509714,109510458,109511303,109516884,109521324,109521551,109524115,109524503,109526416,109530072,109530658,109533558,109536702	Gene ID= ENSG00000151148.13 TPM= 12.26 Transcript Type= protein_coding
chr12	109553737	109573874	109553737	109573874	-	ENST00000545712.6@MMAB	ENST00000545712.6	protein_coding	109573347,109571649,109568770,109565119,109561780,109561420,109561040,109559096,109553737	109573874,109571710,109568863,109565176,109561852,109561517,109561104,109559155,109557136	Gene ID= ENSG00000139428.11 TPM= 5.84 Transcript Type= protein_coding
chr12	109556697	109573530	109556697	109573530	-	transcript5547.chr12.nic@MMAB	transcript5547.chr12.nic	protein_coding	109573347,109571649,109567011,109565119,109561780,109561420,109561040,109559096,109556697	109573530,109571710,109568863,109565176,109561852,109561517,109561104,109559155,109557136	Gene ID= ENSG00000139428.11 TPM= 2.34 Transcript Type= NA
chr12	109556703	109573503	109556703	109573503	-	ENST00000537496.5@MMAB	ENST00000537496.5	protein_coding	109573347,109571649,109568770,109565119,109561780,109561420,109561243,109561040,109559096,109556703	109573503,109571710,109568863,109565176,109561852,109561517,109561329,109561104,109559155,109557136	Gene ID= ENSG00000139428.11 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr12	109573826	109597263	109573826	109597263	+	transcript5536.chr12.nic@MVK	transcript5536.chr12.nic	protein_coding	109573826,109574809,109575998,109579165,109579802,109581395,109586022,109586754,109590771,109591241,109595028,109596426	109573873,109574900,109576145,109579282,109579946,109581550,109586125,109586799,109590861,109591357,109595181,109597263	Gene ID= ENSG00000110921.13 TPM= 6.81 Transcript Type= NA
chr12	109573812	109597266	109573812	109597266	+	ENST00000228510.7@MVK	ENST00000228510.7	protein_coding	109573812,109574809,109575998,109579802,109581395,109586022,109586754,109590771,109591241,109595028,109596426	109573873,109574900,109576145,109579946,109581550,109586125,109586799,109590861,109591357,109595181,109597266	Gene ID= ENSG00000110921.13 TPM= 80.95 Transcript Type= protein_coding
chr12	109573837	109597261	109573837	109597261	+	ENST00000392727.7@MVK	ENST00000392727.7	protein_coding	109573837,109574809,109575998,109579802,109586022,109586754,109590771,109591241,109595028,109596426	109573873,109574900,109576145,109579946,109586125,109586799,109590861,109591357,109595181,109597261	Gene ID= ENSG00000110921.13 TPM= 3.3 Transcript Type= protein_coding
chr12	109573793	109597236	109573793	109597236	+	ENST00000447878.6@MVK	ENST00000447878.6	protein_coding	109573793,109574809,109575998,109586022,109586754,109590771,109591241,109595028,109596426	109573873,109574900,109576145,109586125,109586799,109590861,109591357,109595181,109597236	Gene ID= ENSG00000110921.13 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr12	109573832	109587069	109573832	109587069	+	ENST00000545774.5@MVK	ENST00000545774.5	protein_coding	109573832,109574809,109575998,109586022,109586754	109573873,109574900,109576145,109586125,109587069	Gene ID= ENSG00000110921.13 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr12	109783087	109833401	109783087	109833401	-	ENST00000261740.6@TRPV4	ENST00000261740.6	protein_coding	109833350,109814411,109808296,109802991,109800618,109798614,109796525,109794329,109793930,109793527,109792652,109792363,109788400,109786710,109784316,109783087	109833401,109814827,109808468,109803143,109800758,109798912,109796704,109794487,109794022,109793600,109792817,109792429,109788716,109786837,109784437,109783778	Gene ID= ENSG00000111199.10 TPM= 14.01 Transcript Type= protein_coding
chr12	109850943	109880488	109850943	109880488	-	ENST00000318348.8@GLTP	ENST00000318348.8	protein_coding	109880272,109858683,109857526,109855619,109850943	109880488,109858741,109857659,109855769,109852737	Gene ID= ENSG00000139433.9 TPM= 94.58 Transcript Type= protein_coding
chr12	109900280	109918069	109900280	109918069	+	ENST00000405876.8@TCHP	ENST00000405876.8	protein_coding	109900280,109903027,109903937,109904737,109906572,109907526,109908586,109908871,109911063,109912991,109914442,109915403,109916591	109900426,109903214,109904147,109904793,109906640,109907699,109908698,109908937,109911235,109913072,109914627,109915546,109918069	Gene ID= ENSG00000139437.17 TPM= 29.19 Transcript Type= protein_coding
chr12	109929802	109996389	109929802	109996389	-	ENST00000354574.8@GIT2	ENST00000354574.8	protein_coding	109996173,109991627,109989690,109988963,109983608,109983373,109980952,109967458,109965760,109965526,109961613,109961278,109959847,109953092,109947256,109939165,109938380,109934022,109929802	109996389,109991760,109989802,109989068,109983694,109983503,109981046,109967503,109965765,109965577,109961685,109961375,109959958,109953234,109947504,109939247,109938568,109934085,109933190	Gene ID= ENSG00000139436.20 TPM= 9.34 Transcript Type= protein_coding
chr12	109999430	110022464	109999430	110022464	+	ENST00000550404.1@ANKRD13A	ENST00000550404.1	protein_coding	109999430,110012005,110013125,110016388,110018345,110019139,110021108	109999784,110012137,110013249,110016433,110018488,110019328,110022464	Gene ID= ENSG00000076513.16 TPM= 1.17 Transcript Type= processed_transcript
chr12	110027028	110048555	110027028	110048555	-	ENST00000546651.3@C12orf76	ENST00000546651.3	protein_coding	110048363,110027028	110048555,110028589	Gene ID= ENSG00000174456.13 TPM= 1.17 Transcript Type= protein_coding
chr12	110041177	110048563	110041177	110048563	-	transcript5611.chr12.nic@C12orf76	transcript5611.chr12.nic	protein_coding	110048363,110041177	110048563,110042459	Gene ID= ENSG00000174456.13 TPM= 10.51 Transcript Type= NA
chr12	110124408	110218797	110124408	110218797	+	transcript5614.chr12.nnic@IFT81	transcript5614.chr12.nnic	protein_coding	110124408,110127360,110128046,110128950,110132547,110134948,110135327,110136776,110143382,110146953,110161162,110162919,110180422,110190920,110192617,110203864,110205443,110205595,110209171,110218044	110124861,110127524,110128149,110129130,110132636,110135013,110135437,110136860,110143545,110147048,110161283,110163065,110180571,110191048,110192706,110203950,110205514,110205680,110209216,110218797	Gene ID= ENSG00000122970.15 TPM= 2.34 Transcript Type= NA
chr12	110124335	110218775	110124335	110218775	+	ENST00000552912.5@IFT81	ENST00000552912.5	protein_coding	110124335,110127360,110128046,110128950,110132547,110134948,110135327,110136776,110143382,110146953,110162919,110180422,110190920,110192617,110203864,110205443,110205595,110209171,110218044	110124443,110127524,110128149,110129130,110132636,110135013,110135437,110136860,110143545,110147048,110163065,110180571,110191048,110192706,110203950,110205514,110205680,110209216,110218775	Gene ID= ENSG00000122970.15 TPM= 5.84 Transcript Type= protein_coding
chr12	110124377	110218797	110124377	110218797	+	ENST00000242591.9@IFT81	ENST00000242591.9	protein_coding	110124377,110127360,110128046,110128950,110132547,110134948,110135327,110136776,110143382,110146953,110162919,110180422,110190920,110192617,110203864,110205443,110205595,110209171,110218044	110124861,110127524,110128149,110129130,110132636,110135013,110135437,110136860,110143545,110147048,110163065,110180571,110191048,110192706,110203950,110205514,110205680,110209216,110218797	Gene ID= ENSG00000122970.15 TPM= 9.34 Transcript Type= protein_coding
chr12	110281116	110351090	110281116	110351090	+	ENST00000308664.10@ATP2A2	ENST00000308664.10	protein_coding	110281116,110282604,110282713,110292020,110296599,110322992,110326390,110327553,110332597,110333181,110334012,110339281,110339503,110340659,110342228,110343232,110344886,110345249,110346001,110346201,110350292	110281907,110282621,110282795,110292124,110296737,110323072,110326475,110328017,110332685,110333283,110334143,110339403,110339721,110340994,110342448,110343434,110344971,110345382,110346118,110346321,110351090	Gene ID= ENSG00000174437.16 TPM= 27.44 Transcript Type= protein_coding
chr12	110281681	110347326	110281681	110347326	+	ENST00000539276.6@ATP2A2	ENST00000539276.6	protein_coding	110281681,110282604,110282713,110292020,110296599,110322992,110326390,110327553,110332597,110333181,110334012,110339281,110339503,110340659,110342228,110343232,110344886,110345249,110346001,110346201	110281907,110282621,110282795,110292124,110296737,110323072,110326475,110328017,110332685,110333283,110334143,110339403,110339721,110340994,110342448,110343434,110344971,110345382,110346118,110347326	Gene ID= ENSG00000174437.16 TPM= 14.59 Transcript Type= protein_coding
chr12	110348295	110350974	110348295	110350974	+	transcript5623.chr12.nnic@NA	transcript5623.chr12.nnic	NA	110348295	110350974	Gene ID= novel_gene_chr12_5624 TPM= 2.34 Transcript Type= NA
chr12	110373478	110403711	110373478	110403711	-	transcript5626.chr12.nnic@ANAPC7	transcript5626.chr12.nnic	protein_coding	110402723,110396266,110395101,110388512,110387739,110386327,110382843,110381752,110377393,110376066,110373478	110403711,110396452,110395220,110388623,110387892,110386469,110382960,110381948,110377617,110376216,110374333	Gene ID= ENSG00000196510.12 TPM= 2.34 Transcript Type= NA
chr12	110372900	110403730	110372900	110403730	-	ENST00000455511.7@ANAPC7	ENST00000455511.7	protein_coding	110403527,110396266,110395101,110388512,110387739,110386327,110382843,110381752,110377393,110376066,110372900	110403730,110396452,110395220,110388623,110387892,110386469,110382960,110381948,110377617,110376216,110374333	Gene ID= ENSG00000196510.12 TPM= 3.5 Transcript Type= protein_coding
chr12	110375477	110403730	110375477	110403730	-	ENST00000450008.2@ANAPC7	ENST00000450008.2	protein_coding	110403527,110396266,110395101,110388512,110387739,110386327,110382843,110381752,110377393,110375477	110403730,110396452,110395220,110388623,110387892,110386469,110382960,110381948,110377617,110376216	Gene ID= ENSG00000196510.12 TPM= 19.85 Transcript Type= protein_coding
chr12	110434825	110450407	110434825	110450407	-	ENST00000228825.11@ARPC3	ENST00000228825.11	protein_coding	110450255,110445452,110440312,110437084,110436557,110436110,110434825	110450407,110445551,110440388,110437152,110436683,110436204,110435217	Gene ID= ENSG00000111229.15 TPM= 2.34 Transcript Type= protein_coding
chr12	110452489	110468264	110452489	110468264	-	ENST00000537466.6@GPN3	ENST00000537466.6	protein_coding	110468126,110465106,110459695,110457510,110455815,110455586,110453743,110452489	110468264,110465214,110459862,110457634,110455930,110455682,110453871,110453096	Gene ID= ENSG00000111231.8 TPM= 1.17 Transcript Type= protein_coding
chr12	110452484	110468266	110452484	110468266	-	ENST00000228827.7@GPN3	ENST00000228827.7	protein_coding	110468156,110465106,110459695,110457510,110455815,110455586,110453743,110452484	110468266,110465214,110459862,110457634,110455930,110455682,110453871,110453096	Gene ID= ENSG00000111231.8 TPM= 2.34 Transcript Type= protein_coding
chr12	110468364	110490385	110468364	110490385	+	ENST00000377673.9@FAM216A	ENST00000377673.9	protein_coding	110468364,110473078,110485078,110486325,110486534,110487861,110490019	110469018,110473118,110485199,110486454,110486717,110487943,110490385	Gene ID= ENSG00000204856.11 TPM= 8.17 Transcript Type= protein_coding
chr12	110491097	110502117	110491097	110502117	-	ENST00000549578.5@VPS29	ENST00000549578.5	protein_coding	110502049,110496012,110492996,110491097	110502117,110496203,110493231,110492122	Gene ID= ENSG00000111237.18 TPM= 1.17 Transcript Type= protein_coding
chr12	110491523	110502099	110491523	110502099	-	ENST00000360579.11@VPS29	ENST00000360579.11	protein_coding	110502049,110499535,110496012,110492996,110491523	110502099,110499546,110496203,110493231,110492122	Gene ID= ENSG00000111237.18 TPM= 12.84 Transcript Type= protein_coding
chr12	110491886	110502111	110491886	110502111	-	ENST00000549970.5@VPS29	ENST00000549970.5	protein_coding	110502049,110499457,110496012,110492996,110491886	110502111,110499546,110496203,110493231,110492122	Gene ID= ENSG00000111237.18 TPM= 2.34 Transcript Type= protein_coding
chr12	110499587	110501179	110499587	110501179	+	transcript5673.chr12.nnic@NA	transcript5673.chr12.nnic	NA	110499587	110501179	Gene ID= novel_gene_chr12_5674 TPM= 4.67 Transcript Type= NA
chr12	110533245	110583335	110533245	110583335	-	transcript5680.chr12.nic@PPTC7	transcript5680.chr12.nic	protein_coding	110582809,110551789,110545880,110538144,110533245	110583335,110551968,110546078,110539945,110537095	Gene ID= ENSG00000196850.5 TPM= 2.34 Transcript Type= NA
chr12	110533245	110583320	110533245	110583320	-	ENST00000354300.4@PPTC7	ENST00000354300.4	protein_coding	110582809,110551789,110545880,110539822,110538144,110533245	110583320,110551968,110546078,110539945,110538273,110537095	Gene ID= ENSG00000196850.5 TPM= 19.85 Transcript Type= protein_coding
chr12	110614027	110649128	110614027	110649128	+	ENST00000614115.4@TCTN1	ENST00000614115.4	protein_coding	110614027,110619836,110626362,110628767,110632472,110634396,110636481,110640383,110641024,110641542,110642247,110644967,110647211,110647749,110649043	110614402,110619956,110626492,110628918,110632559,110634463,110636501,110640517,110641149,110641625,110642389,110645129,110647336,110647893,110649128	Gene ID= ENSG00000204852.15 TPM= 2.34 Transcript Type= protein_coding
chr12	110614027	110649430	110614027	110649430	+	ENST00000551590.5@TCTN1	ENST00000551590.5	protein_coding	110614027,110619836,110626362,110628767,110632472,110634670,110636481,110640383,110641024,110641542,110642249,110644967,110647211,110647749,110649043	110614402,110619956,110626492,110628918,110632559,110634779,110636501,110640517,110641149,110641627,110642389,110645129,110647336,110647893,110649430	Gene ID= ENSG00000204852.15 TPM= 3.5 Transcript Type= protein_coding
chr12	110614027	110630287	110614027	110630287	+	ENST00000550703.6@TCTN1	ENST00000550703.6	protein_coding	110614027,110619836,110626362,110628767	110614402,110619956,110626492,110630287	Gene ID= ENSG00000204852.15 TPM= 1.17 Transcript Type= protein_coding
chr12	110614164	110649128	110614164	110649128	+	ENST00000397659.8@TCTN1	ENST00000397659.8	protein_coding	110614164,110619836,110626362,110628767,110632472,110634670,110636481,110640383,110641024,110641542,110642249,110644967,110647196,110647749,110649043	110614402,110619956,110626492,110628918,110632559,110634779,110636501,110640517,110641149,110641627,110642389,110645129,110647336,110647893,110649128	Gene ID= ENSG00000204852.15 TPM= 18.68 Transcript Type= protein_coding
chr12	110614113	110649128	110614113	110649128	+	ENST00000397655.7@TCTN1	ENST00000397655.7	protein_coding	110614113,110619836,110626362,110628767,110632472,110634396,110636481,110640383,110641024,110641542,110642249,110644967,110647211,110647749,110649043	110614402,110619956,110626492,110628918,110632559,110634463,110636501,110640517,110641149,110641627,110642389,110645129,110647336,110647893,110649128	Gene ID= ENSG00000204852.15 TPM= 2.34 Transcript Type= protein_coding
chr12	110627841	110689417	110627841	110689417	-	ENST00000548312.5@HVCN1	ENST00000548312.5	protein_coding	110689312,110688625,110683225,110661164,110655234,110651217,110650168,110627841	110689417,110688708,110683264,110661448,110655338,110651448,110650280,110628176	Gene ID= ENSG00000122986.13 TPM= 1.17 Transcript Type= protein_coding
chr12	110648779	110689409	110648779	110689409	-	transcript5692.chr12.nic@HVCN1	transcript5692.chr12.nic	protein_coding	110689312,110688625,110683225,110661164,110655234,110651217,110650168,110648779	110689409,110688708,110683264,110661448,110655338,110651448,110650280,110649475	Gene ID= ENSG00000122986.13 TPM= 11.68 Transcript Type= NA
chr12	110648779	110689824	110648779	110689824	-	transcript5693.chr12.nic@HVCN1	transcript5693.chr12.nic	protein_coding	110689726,110688625,110683225,110661164,110655234,110651217,110650168,110648779	110689824,110688708,110683264,110661448,110655338,110651448,110650280,110649475	Gene ID= ENSG00000122986.13 TPM= 10.51 Transcript Type= NA
chr12	110648779	110689157	110648779	110689157	-	ENST00000242607.12@HVCN1	ENST00000242607.12	protein_coding	110689080,110688625,110683225,110661164,110655234,110651217,110650168,110648779	110689157,110688708,110683264,110661448,110655338,110651448,110650280,110649475	Gene ID= ENSG00000122986.13 TPM= 25.69 Transcript Type= protein_coding
chr12	110719908	110742939	110719908	110742939	-	ENST00000340766.9@PPP1CC	ENST00000340766.9	protein_coding	110742653,110731770,110730529,110724660,110722472,110722135,110721105,110719908	110742939,110731901,110730759,110724764,110722695,110722269,110721165,110720204	Gene ID= ENSG00000186298.11 TPM= 1.17 Transcript Type= protein_coding
chr12	111360651	111369121	111360651	111369121	-	ENST00000361483.4@FAM109A	ENST00000361483.4	protein_coding	111368912,111366113,111365564,111360651	111369121,111366257,111365651,111363463	Gene ID= ENSG00000198324.13 TPM= 14.59 Transcript Type= protein_coding
chr12	111360679	111369104	111360679	111369104	-	transcript5713.chr12.nnic@FAM109A	transcript5713.chr12.nnic	protein_coding	111368912,111366113,111360679	111369104,111366257,111363463	Gene ID= ENSG00000198324.13 TPM= 49.62 Transcript Type= NA
chr12	111406048	111451623	111406048	111451623	+	transcript5741.chr12.nnic@SH2B3	transcript5741.chr12.nnic	protein_coding	111406048,111418119,111420409,111446753,111446942,111447125,111447330,111447656,111447983	111406277,111418877,111420488,111446854,111447033,111447219,111447544,111447827,111451623	Gene ID= ENSG00000111252.10 TPM= 4.09 Transcript Type= NA
chr12	111405948	111451623	111405948	111451623	+	ENST00000341259.6@SH2B3	ENST00000341259.6	protein_coding	111405948,111418119,111446753,111446942,111447125,111447330,111447656,111447983	111406277,111418877,111446854,111447033,111447219,111447544,111447827,111451623	Gene ID= ENSG00000111252.10 TPM= 118.51 Transcript Type= protein_coding
chr12	111452214	111599676	111452214	111599676	-	ENST00000377617.7@ATXN2	ENST00000377617.7	protein_coding	111598784,111555883,111554158,111552906,111552280,111525192,111520882,111519879,111518249,111516154,111513357,111510385,111509891,111509549,111488476,111486761,111485713,111485271,111470558,111470108,111464662,111457214,111456029,111453677,111452214	111599676,111555919,111554217,111552977,111552430,111525316,111520973,111520076,111518427,111516363,111513539,111510582,111509998,111509619,111488780,111486824,111485865,111485331,111470742,111470240,111464715,111457359,111456256,111453845,111452840	Gene ID= ENSG00000204842.14 TPM= 6.22 Transcript Type= protein_coding
chr12	111452214	111599318	111452214	111599318	-	transcript5722.chr12.nic@ATXN2	transcript5722.chr12.nic	protein_coding	111598784,111555883,111554158,111552906,111552280,111525192,111520882,111519879,111518249,111513357,111510385,111509891,111509549,111488476,111486761,111485713,111485271,111470558,111470108,111464662,111457214,111456029,111453677,111452214	111599318,111555919,111554217,111552977,111552430,111525316,111520973,111520076,111518427,111513539,111510582,111509998,111509619,111488780,111486824,111485865,111485331,111470742,111470240,111464715,111457359,111456256,111453845,111452840	Gene ID= ENSG00000204842.14 TPM= 3.3 Transcript Type= NA
chr12	111452214	111599298	111452214	111599298	-	transcript5731.chr12.nic@ATXN2	transcript5731.chr12.nic	protein_coding	111598784,111555883,111554158,111552906,111552280,111525192,111520882,111519879,111518249,111513357,111510385,111509891,111509549,111488476,111486761,111485713,111485265,111470558,111470108,111457214,111456029,111453677,111452214	111599298,111555919,111554217,111552977,111552430,111525316,111520973,111520076,111518427,111513539,111510582,111509998,111509619,111488780,111486824,111485865,111485331,111470742,111470240,111457359,111456256,111453845,111452840	Gene ID= ENSG00000204842.14 TPM= 5.64 Transcript Type= NA
chr12	111644082	111685976	111644082	111685976	-	transcript5765.chr12.nnic@BRAP	transcript5765.chr12.nnic	protein_coding	111685711,111679151,111672661,111665639,111660600,111659207,111658736,111655566,111649939,111644082	111685976,111679340,111672774,111665787,111660675,111659345,111658845,111655655,111650042,111644562	Gene ID= ENSG00000089234.15 TPM= 2.34 Transcript Type= NA
chr12	111642146	111685986	111642146	111685986	-	ENST00000419234.8@BRAP	ENST00000419234.8	protein_coding	111685711,111683146,111681637,111679151,111672661,111665639,111660600,111659207,111658736,111655566,111649939,111642146	111685986,111683307,111681835,111679340,111672774,111665787,111660675,111659345,111658845,111655655,111650042,111644562	Gene ID= ENSG00000089234.15 TPM= 19.85 Transcript Type= protein_coding
chr12	111686098	111757097	111686098	111757097	+	ENST00000313698.8@ACAD10	ENST00000313698.8	protein_coding	111686098,111692697,111702162,111705738,111709526,111712498,111715821,111721671,111727962,111729806,111733923,111736831,111744643,111746144,111747049,111747295,111748317,111749173,111753772,111755668,111756333	111686239,111692896,111702310,111705932,111709684,111712657,111715962,111721739,111728143,111729956,111734068,111737004,111745043,111746284,111747186,111747385,111748475,111749345,111753915,111755745,111757097	Gene ID= ENSG00000111271.14 TPM= 14.01 Transcript Type= protein_coding
chr12	111766954	111809980	111766954	111809980	+	transcript5792.chr12.nnic@ALDH2	transcript5792.chr12.nnic	protein_coding	111766954,111767022,111781918,111783158,111785267,111789823,111790434,111791306,111792061,111792598,111798078,111799906,111803859,111809543	111766965,111767096,111782022,111783298,111785346,111789934,111790562,111791419,111792163,111792782,111798242,111800063,111803973,111809980	Gene ID= ENSG00000111275.12 TPM= 59.51 Transcript Type= NA
chr12	111814626	111817793	111814626	111817793	+	transcript5824.chr12.nnic@NA	transcript5824.chr12.nnic	NA	111814626	111817793	Gene ID= novel_gene_chr12_5825 TPM= 3.5 Transcript Type= NA
chr12	111839768	111842902	111839768	111842902	-	ENST00000456429.5@MAPKAPK5-AS1	ENST00000456429.5	lincRNA	111841327,111840333,111839768	111842902,111840477,111840003	Gene ID= ENSG00000234608.7 TPM= 2.34 Transcript Type= lincRNA
chr12	111839764	111842902	111839764	111842902	-	ENST00000428207.4@MAPKAPK5-AS1	ENST00000428207.4	lincRNA	111841327,111839764	111842902,111840477	Gene ID= ENSG00000234608.7 TPM= 7.01 Transcript Type= lincRNA
chr12	111839770	111841906	111839770	111841906	-	ENST00000442119.5@MAPKAPK5-AS1	ENST00000442119.5	lincRNA	111841684,111840333,111839770	111841906,111840477,111840003	Gene ID= ENSG00000234608.7 TPM= 2.34 Transcript Type= lincRNA
chr12	111839767	111841902	111839767	111841902	-	ENST00000443596.1@MAPKAPK5-AS1	ENST00000443596.1	lincRNA	111841684,111839767	111841902,111840477	Gene ID= ENSG00000234608.7 TPM= 2.34 Transcript Type= lincRNA
chr12	111841978	111902238	111841978	111902238	+	ENST00000550735.6@MAPKAPK5	ENST00000550735.6	protein_coding	111841978,111865250,111866156,111867572,111868753,111870271,111871085,111880447,111883581,111885916,111888488,111888885,111890040,111892967	111842769,111865323,111866231,111867669,111868861,111870360,111871180,111880527,111883768,111886036,111888618,111889000,111890144,111902238	Gene ID= ENSG00000089022.13 TPM= 24.52 Transcript Type= protein_coding
chr12	111842039	111893414	111842039	111893414	+	transcript5846.chr12.nnic@MAPKAPK5	transcript5846.chr12.nnic	protein_coding	111842039,111865250,111866156,111867572,111868753,111871085,111880447,111883581,111885916,111888488,111888885,111890040,111892967	111842769,111865323,111866231,111867669,111868861,111871180,111880527,111883768,111886036,111888618,111889000,111890144,111893414	Gene ID= ENSG00000089022.13 TPM= 3.5 Transcript Type= NA
chr12	111842228	111893347	111842228	111893347	+	transcript5851.chr12.nnic@MAPKAPK5	transcript5851.chr12.nnic	protein_coding	111842228,111866156,111867572,111871085,111880447,111883581,111885916,111888488,111888885,111890040,111892967	111842769,111866231,111867669,111871180,111880527,111883768,111886036,111888618,111889000,111890144,111893347	Gene ID= ENSG00000089022.13 TPM= 2.34 Transcript Type= NA
chr12	111931299	112006054	111931299	112006054	-	transcript5854.chr12.nic@TMEM116	transcript5854.chr12.nic	protein_coding	112005949,112005257,112003800,111991758,111965595,111943265,111938161,111937160,111936692,111933886,111932586,111931299	112006054,112005303,112003863,111991889,111965759,111943369,111938210,111937243,111936830,111934030,111932659,111931827	Gene ID= ENSG00000198270.12 TPM= 3.5 Transcript Type= NA
chr12	111931299	112005982	111931299	112005982	-	transcript5855.chr12.nnic@TMEM116	transcript5855.chr12.nnic	protein_coding	112005949,112005602,112005257,112002440,111991758,111943265,111938161,111937160,111936692,111933886,111932586,111931299	112005982,112005686,112005303,112003863,111991889,111943369,111938210,111937243,111936830,111934030,111932659,111931827	Gene ID= ENSG00000198270.12 TPM= 2.92 Transcript Type= NA
chr12	111931299	112006054	111931299	112006054	-	transcript5858.chr12.nic@TMEM116	transcript5858.chr12.nic	protein_coding	112005949,112005257,111991758,111965595,111943265,111938161,111937160,111936692,111933886,111932586,111931299	112006054,112005303,111991889,111965759,111943369,111938210,111937243,111936830,111934030,111932659,111931827	Gene ID= ENSG00000198270.12 TPM= 3.5 Transcript Type= NA
chr12	111931299	112006054	111931299	112006054	-	transcript5859.chr12.nic@TMEM116	transcript5859.chr12.nic	protein_coding	112005949,112005257,112003800,111991758,111943265,111938161,111937160,111936692,111933886,111932586,111931299	112006054,112005303,112003863,111991889,111943369,111938210,111937243,111936830,111934030,111932659,111931827	Gene ID= ENSG00000198270.12 TPM= 5.25 Transcript Type= NA
chr12	112013316	112023451	112013316	112023451	+	ENST00000261735.3@ERP29	ENST00000261735.3	protein_coding	112013316,112019756,112022150	112013609,112019894,112023451	Gene ID= ENSG00000089248.6 TPM= 277.89 Transcript Type= protein_coding
chr12	112013348	112023220	112013348	112023220	+	ENST00000455836.1@ERP29	ENST00000455836.1	protein_coding	112013348,112022150	112013609,112023220	Gene ID= ENSG00000089248.6 TPM= 23.35 Transcript Type= protein_coding
chr12	112026689	112109022	112026689	112109022	-	ENST00000261745.8@NAA25	ENST00000261745.8	protein_coding	112108716,112093051,112090726,112087683,112081060,112078634,112078188,112075678,112074675,112071895,112068880,112061181,112060270,112054388,112053558,112048292,112047665,112043625,112043088,112042039,112040481,112039229,112033233,112026689	112109022,112093136,112090864,112087801,112081134,112078741,112078266,112075789,112074764,112072064,112068992,112061388,112060359,112054568,112053657,112048443,112047790,112043868,112043211,112042104,112040578,112039339,112033379,112029653	Gene ID= ENSG00000111300.9 TPM= 2.34 Transcript Type= protein_coding
chr12	112125545	112153603	112125545	112153603	+	ENST00000257604.9@TRAFD1	ENST00000257604.9	protein_coding	112125545,112130511,112134738,112135013,112140819,112142089,112145586,112148074,112149751,112151801,112152427,112152735	112126149,112130569,112134873,112135066,112141224,112142295,112145662,112148304,112149871,112152140,112152499,112153603	Gene ID= ENSG00000135148.11 TPM= 8.56 Transcript Type= protein_coding
chr12	112130500	112153603	112130500	112153603	+	transcript5893.chr12.nic@TRAFD1	transcript5893.chr12.nic	protein_coding	112130500,112134738,112135013,112140819,112142089,112145586,112148074,112149751,112151801,112152427,112152735	112130569,112134873,112135066,112141224,112142295,112145662,112148304,112149871,112152140,112152499,112153603	Gene ID= ENSG00000135148.11 TPM= 7.39 Transcript Type= NA
chr12	112125501	112153609	112125501	112153609	+	ENST00000412615.6@TRAFD1	ENST00000412615.6	protein_coding	112125501,112130511,112134738,112135013,112140819,112142089,112145586,112148074,112149751,112151801,112152427,112152735	112125618,112130569,112134873,112135066,112141224,112142295,112145662,112148304,112149871,112152140,112152499,112153609	Gene ID= ENSG00000135148.11 TPM= 40.08 Transcript Type= protein_coding
chr12	112160190	112382439	112160190	112382439	-	ENST00000377560.9@HECTD4	ENST00000377560.9	protein_coding	112381952,112319225,112314457,112313017,112309561,112308753,112306064,112283110,112279228,112274847,112273655,112270227,112269704,112266912,112265878,112265175,112264090,112261305,112259112,112258496,112256320,112254043,112252424,112250971,112250144,112248320,112248067,112247462,112246901,112243874,112243620,112243353,112239881,112239052,112236945,112235504,112235077,112233004,112231513,112230687,112229698,112228647,112228089,112226643,112219386,112217034,112216773,112216292,112212487,112210015,112208494,112207874,112204486,112203636,112200638,112194885,112193469,112193061,112192560,112190786,112184187,112183059,112179174,112178931,112176596,112175736,112172671,112171117,112170333,112169503,112167814,112167317,112164109,112163542,112163042,112160190	112382439,112319742,112314546,112313147,112309669,112308891,112306234,112283302,112279386,112274960,112273795,112270459,112269849,112266982,112265983,112265295,112264212,112261429,112259265,112258596,112256518,112254162,112252528,112251134,112250377,112248512,112248171,112247550,112247076,112244009,112243761,112243519,112240027,112239236,112237098,112235784,112235266,112233085,112231715,112230822,112229880,112228811,112228258,112226758,112219489,112217195,112216921,112216371,112212650,112210252,112208630,112208000,112204623,112203772,112200798,112195066,112193674,112193191,112192765,112190965,112185493,112183266,112179397,112179082,112176702,112175859,112172861,112171263,112170452,112169658,112167917,112167538,112164275,112163737,112163264,112162523	Gene ID= ENSG00000173064.12 TPM= 22.18 Transcript Type= protein_coding
chr12	112405203	112409596	112405203	112409596	-	ENST00000424576.6@RPL6	ENST00000424576.6	protein_coding	112409411,112408420,112408240,112406747,112406294,112405853,112405203	112409596,112408656,112408338,112406890,112406342,112406037,112405376	Gene ID= ENSG00000089009.15 TPM= 42.03 Transcript Type= protein_coding
chr12	112405199	112409641	112405199	112409641	-	ENST00000202773.13@RPL6	ENST00000202773.13	protein_coding	112409587,112408420,112408240,112406747,112406294,112405853,112405199	112409641,112408656,112408338,112406890,112406342,112406037,112405376	Gene ID= ENSG00000089009.15 TPM= 272.73 Transcript Type= protein_coding
chr12	112405199	112408658	112405199	112408658	-	transcript5902.chr12.nnic@RPL6	transcript5902.chr12.nnic	protein_coding	112408420,112406294,112405853,112405199	112408658,112406324,112406037,112405376	Gene ID= ENSG00000089009.15 TPM= 15.47 Transcript Type= NA
chr12	112418891	112509913	112418891	112509913	+	transcript5911.chr12.nic@PTPN11	transcript5911.chr12.nic	protein_coding	112418891,112446276,112450318,112453195,112454564,112455950,112472944,112477651,112477857,112482074,112486463,112488443,112489024,112502144,112504695,112505825	112419125,112446398,112450512,112453387,112454680,112456063,112473040,112477730,112478015,112482205,112486629,112488510,112489175,112502256,112504796,112509913	Gene ID= ENSG00000179295.17 TPM= 25.69 Transcript Type= NA
chr12	112418914	112509913	112418914	112509913	+	ENST00000351677.6@PTPN11	ENST00000351677.6	protein_coding	112418914,112446276,112450318,112453195,112454564,112455950,112472944,112477651,112477857,112482074,112486475,112488443,112489024,112502144,112504695,112505825	112419125,112446398,112450512,112453387,112454680,112456063,112473040,112477730,112478015,112482205,112486629,112488510,112489175,112502256,112504796,112509913	Gene ID= ENSG00000179295.17 TPM= 170.47 Transcript Type= protein_coding
chr12	112440565	112445111	112440565	112445111	-	transcript5923.chr12.nnic@NA	transcript5923.chr12.nnic	NA	112440565	112445111	Gene ID= novel_gene_chr12_5924 TPM= 7.01 Transcript Type= NA
chr12	112906777	112919903	112906777	112919903	+	ENST00000202917.9@OAS1	ENST00000202917.9	protein_coding	112906777,112908536,112911051,112916509,112917547,112919389	112907219,112908824,112911235,112916738,112917700,112919903	Gene ID= ENSG00000089127.12 TPM= 39.11 Transcript Type= protein_coding
chr12	112906964	112919903	112906964	112919903	+	transcript5927.chr12.nic@OAS1	transcript5927.chr12.nic	protein_coding	112906964,112908536,112911051,112916509,112917547,112918597	112907219,112908824,112911235,112916738,112917700,112919903	Gene ID= ENSG00000089127.12 TPM= 10.51 Transcript Type= NA
chr12	112906783	112919875	112906783	112919875	+	ENST00000445409.6@OAS1	ENST00000445409.6	protein_coding	112906783,112908536,112911051,112916509,112917547,112919487	112907219,112908824,112911235,112916738,112917700,112919875	Gene ID= ENSG00000089127.12 TPM= 2.34 Transcript Type= protein_coding
chr12	112906942	112919903	112906942	112919903	+	transcript5930.chr12.nic@OAS1	transcript5930.chr12.nic	protein_coding	112906942,112908536,112911098,112916509,112917547,112919389	112907219,112908824,112911235,112916738,112917700,112919903	Gene ID= ENSG00000089127.12 TPM= 2.92 Transcript Type= NA
chr12	112938427	112973249	112938427	112973249	+	transcript5945.chr12.nnic@OAS3	transcript5945.chr12.nnic	protein_coding	112938427,112941648,112944476,112946743,112947946,112948861,112950693,112961071,112962652,112963313,112964235,112965744,112967418,112967936,112969608,112969962	112938707,112941852,112944651,112946981,112948099,112949205,112950975,112961246,112962902,112963457,112964408,112966029,112967593,112968174,112969755,112973249	Gene ID= ENSG00000111331.12 TPM= 55.46 Transcript Type= NA
chr12	112938313	112951863	112938313	112951863	+	transcript5956.chr12.nic@OAS3	transcript5956.chr12.nic	protein_coding	112938313,112941570,112944476,112946743,112947946,112948861,112950693	112938707,112941852,112944651,112946981,112948099,112949205,112951863	Gene ID= ENSG00000111331.12 TPM= 2.34 Transcript Type= NA
chr12	112971535	112976325	112971535	112976325	+	transcript5960.chr12.nnic@NA	transcript5960.chr12.nnic	NA	112971535	112976325	Gene ID= novel_gene_chr12_5961 TPM= 5.25 Transcript Type= NA
chr12	112978395	113011723	112978395	113011723	+	ENST00000342315.8@OAS2	ENST00000342315.8	protein_coding	112978395,112987038,112995296,112997520,112998266,113002932,113004934,113006413,113007705,113009087,113010374	112978785,112987308,112995474,112997755,112998410,113003102,113005222,113006600,113007943,113009240,113011723	Gene ID= ENSG00000111335.12 TPM= 11.09 Transcript Type= protein_coding
chr12	112978402	113011718	112978402	113011718	+	ENST00000392583.6@OAS2	ENST00000392583.6	protein_coding	112978402,112987038,112995296,112997520,112998266,113002932,113004934,113006413,113007705,113009087	112978785,112987308,112995474,112997755,112998410,113003102,113005222,113006600,113007943,113011718	Gene ID= ENSG00000111335.12 TPM= 22.77 Transcript Type= protein_coding
chr12	112978482	112988805	112978482	112988805	+	ENST00000449768.2@OAS2	ENST00000449768.2	protein_coding	112978482,112987038	112978785,112988805	Gene ID= ENSG00000111335.12 TPM= 4.67 Transcript Type= protein_coding
chr12	112978590	113011216	112978590	113011216	+	ENST00000620097.1@OAS2	ENST00000620097.1	protein_coding	112978590,112987038,112995296,112997520,112998266,113002932,113004934,113006413,113007705,113009087,113010374,113010485	112978785,112987308,112995474,112997755,112998410,113003102,113005222,113006600,113007943,113009240,113010481,113011216	Gene ID= ENSG00000111335.12 TPM= 2.34 Transcript Type= protein_coding
chr12	113057690	113098028	113057690	113098028	+	ENST00000257600.3@DTX1	ENST00000257600.3	protein_coding	113057690,113077424,113093162,113093539,113094038,113094789,113095042,113095325,113096715	113058451,113078105,113093223,113093700,113094099,113094947,113095203,113095414,113098028	Gene ID= ENSG00000135144.7 TPM= 8.17 Transcript Type= protein_coding
chr12	113158494	113185497	113158494	113185497	-	transcript5968.chr12.nic@DDX54	transcript5968.chr12.nic	protein_coding	113185278,113180929,113179935,113179143,113178977,113177052,113176840,113175036,113174875,113174640,113172353,113169770,113165802,113165644,113164067,113163132,113161893,113161270,113158494	113185497,113181058,113180005,113179331,113179026,113177093,113176935,113175157,113174936,113174771,113172563,113169904,113166032,113165717,113164285,113163274,113163045,113161382,113159109	Gene ID= ENSG00000123064.12 TPM= 5.84 Transcript Type= NA
chr12	113157174	113185479	113157174	113185479	-	ENST00000314045.11@DDX54	ENST00000314045.11	protein_coding	113185278,113180929,113179935,113179143,113178977,113177052,113176840,113175036,113174875,113174640,113172353,113169770,113165802,113165644,113164067,113163132,113162932,113161893,113161270,113157174	113185479,113181058,113180005,113179331,113179026,113177093,113176935,113175157,113174936,113174771,113172563,113169904,113166032,113165717,113164285,113163274,113163045,113161997,113161382,113159112	Gene ID= ENSG00000123064.12 TPM= 5.84 Transcript Type= protein_coding
chr12	113157174	113185479	113157174	113185479	-	ENST00000306014.9@DDX54	ENST00000306014.9	protein_coding	113185278,113180929,113179935,113179143,113178977,113177052,113176840,113175036,113174875,113174640,113172353,113169770,113165802,113165644,113164067,113163132,113162932,113161893,113161270,113157174	113185479,113181058,113180005,113179331,113179026,113177093,113176935,113175157,113174936,113174771,113172563,113169904,113166032,113165717,113164285,113163274,113163045,113161997,113161382,113159109	Gene ID= ENSG00000123064.12 TPM= 4.67 Transcript Type= protein_coding
chr12	113185526	113192368	113185526	113192368	+	ENST00000548278.1@RITA1	ENST00000548278.1	protein_coding	113185526,113186185,113186683,113191310	113186021,113186316,113187048,113192368	Gene ID= ENSG00000139405.15 TPM= 10.51 Transcript Type= protein_coding
chr12	113221460	113298585	113221460	113298585	+	ENST00000550785.5@TPCN1	ENST00000550785.5	protein_coding	113221460,113225244,113226728,113260368,113266180,113267843,113268742,113269757,113272658,113273232,113273569,113276919,113277240,113278189,113278772,113280151,113284581,113284718,113285889,113286987,113288163,113288758,113290128,113290952,113291609,113291874,113292934,113293269,113295960	113221626,113225336,113226964,113260492,113266356,113267956,113268872,113269845,113272692,113273290,113273668,113277035,113277364,113278237,113278835,113280195,113284637,113284771,113285961,113287094,113288234,113288847,113290243,113290998,113291677,113291958,113293073,113293349,113298585	Gene ID= ENSG00000186815.12 TPM= 36.78 Transcript Type= protein_coding
chr12	113221438	113298585	113221438	113298585	+	ENST00000335509.10@TPCN1	ENST00000335509.10	protein_coding	113221438,113226728,113260368,113266180,113267843,113268742,113269757,113272658,113273232,113273569,113276919,113277240,113278189,113278772,113280151,113284581,113284718,113285889,113286987,113288163,113288758,113290128,113290952,113291609,113291874,113292934,113293269,113295960	113221626,113226964,113260492,113266356,113267956,113268872,113269845,113272692,113273290,113273668,113277035,113277364,113278237,113278835,113280195,113284637,113284771,113285961,113287094,113288234,113288847,113290243,113290998,113291677,113291958,113293073,113293349,113298585	Gene ID= ENSG00000186815.12 TPM= 42.62 Transcript Type= protein_coding
chr12	113298781	113335167	113298781	113335167	-	transcript5986.chr12.nic@SLC8B1	transcript5986.chr12.nic	protein_coding	113334443,113332723,113321196,113321056,113320850,113320581,113320331,113318964,113316942,113316526,113315335,113310234,113307691,113306495,113304321,113298781	113335167,113332960,113321348,113321108,113320907,113320686,113320498,113319071,113317001,113316656,113315476,113310355,113307844,113306575,113304385,113299974	Gene ID= ENSG00000089060.11 TPM= 46.3 Transcript Type= NA
chr12	113298781	113335167	113298781	113335167	-	transcript5993.chr12.nic@SLC8B1	transcript5993.chr12.nic	protein_coding	113334443,113332723,113321196,113321056,113320850,113320581,113318964,113316942,113316526,113315335,113310234,113307691,113306495,113304321,113298781	113335167,113332960,113321348,113321108,113320907,113320686,113319071,113317001,113316656,113315476,113310355,113307844,113306575,113304385,113299974	Gene ID= ENSG00000089060.11 TPM= 6.89 Transcript Type= NA
chr12	113298781	113335167	113298781	113335167	-	transcript5994.chr12.nic@SLC8B1	transcript5994.chr12.nic	protein_coding	113334443,113332723,113321196,113321056,113320331,113318964,113316942,113316526,113315335,113310234,113307691,113306495,113304321,113298781	113335167,113332960,113321348,113321108,113320907,113319071,113317001,113316656,113315476,113310355,113307844,113306575,113304385,113299974	Gene ID= ENSG00000089060.11 TPM= 9.22 Transcript Type= NA
chr12	113298767	113335120	113298767	113335120	-	ENST00000202831.7@SLC8B1	ENST00000202831.7	protein_coding	113334993,113332723,113321196,113321056,113320850,113320581,113320331,113318964,113316942,113316526,113315335,113310234,113307691,113306495,113304321,113298767	113335120,113332960,113321348,113321108,113320907,113320686,113320498,113319071,113317001,113316656,113315476,113310355,113307844,113306575,113304385,113299974	Gene ID= ENSG00000089060.11 TPM= 6.01 Transcript Type= protein_coding
chr12	113370473	113381240	113370473	113381240	+	transcript6009.chr12.nic@PLBD2	transcript6009.chr12.nic	protein_coding	113370473,113374474,113374793,113380745	113372807,113374574,113375007,113381240	Gene ID= ENSG00000151176.7 TPM= 4.67 Transcript Type= NA
chr12	113358570	113391625	113358570	113391625	+	ENST00000280800.4@PLBD2	ENST00000280800.4	protein_coding	113358570,113369116,113372649,113374474,113374793,113380745,113384105,113384851,113385212,113386937,113387744,113388459	113358890,113369209,113372807,113374574,113375007,113380842,113384265,113384946,113385283,113387089,113387906,113391625	Gene ID= ENSG00000151176.7 TPM= 16.35 Transcript Type= protein_coding
chr12	113392445	113403888	113392445	113403888	-	ENST00000257549.8@SDS	ENST00000257549.8	protein_coding	113403768,113399556,113399112,113398707,113398515,113397165,113393892,113392445	113403888,113399710,113399151,113398846,113398606,113397392,113394016,113393149	Gene ID= ENSG00000135094.10 TPM= 8.17 Transcript Type= protein_coding
chr12	113422237	113438276	113422237	113438276	+	ENST00000403593.8@SDSL	ENST00000403593.8	protein_coding	113422237,113427962,113428420,113429160,113434134,113435329,113436751,113437886	113422477,113428156,113428459,113429299,113434222,113435556,113436875,113438276	Gene ID= ENSG00000139410.14 TPM= 22.18 Transcript Type= protein_coding
chr12	113816736	113966342	113816736	113966342	-	transcript6016.chr12.nnic@RBM19	transcript6016.chr12.nnic	protein_coding	113966192,113962232,113960059,113959865,113959212,113957782,113955131,113952512,113950083,113948833,113947334,113946354,113945828,113942324,113939960,113937007,113927054,113924697,113920611,113918392,113914969,113858791,113844668,113823209,113822200,113816736	113966342,113962414,113960178,113959903,113959404,113958050,113955211,113952590,113950154,113949036,113947464,113946475,113945924,113942434,113940160,113937136,113927229,113924757,113920690,113918447,113915085,113858896,113844788,113823321,113822646,113818186	Gene ID= ENSG00000122965.10 TPM= 4.67 Transcript Type= NA
chr12	113816738	113966342	113816738	113966342	-	transcript6017.chr12.nic@RBM19	transcript6017.chr12.nic	protein_coding	113966192,113962232,113960059,113959865,113959212,113957782,113955131,113952512,113950083,113948833,113947334,113946354,113945828,113942324,113939960,113937007,113927054,113924697,113920611,113918392,113914969,113858791,113844668,113823209,113818103,113816738	113966342,113962414,113960178,113959903,113959404,113958050,113955211,113952590,113950154,113949036,113947464,113946475,113945924,113942434,113940160,113937136,113927229,113924757,113920690,113918447,113915085,113858896,113844788,113823321,113818186,113817925	Gene ID= ENSG00000122965.10 TPM= 8.17 Transcript Type= NA
chr12	113822054	113966342	113822054	113966342	-	transcript6023.chr12.nnic@RBM19	transcript6023.chr12.nnic	protein_coding	113966192,113962232,113960059,113959865,113959212,113957782,113955131,113952512,113948833,113947334,113946354,113945828,113942324,113939960,113937007,113927054,113924697,113920611,113918392,113914969,113858791,113844668,113823209,113822054	113966342,113962414,113960178,113959903,113959404,113958050,113955211,113952590,113949036,113947464,113946475,113945924,113942434,113940160,113937136,113927229,113924757,113920690,113918447,113915085,113858896,113844788,113823321,113822646	Gene ID= ENSG00000122965.10 TPM= 3.89 Transcript Type= NA
chr12	113822057	113966371	113822057	113966371	-	ENST00000261741.9@RBM19	ENST00000261741.9	protein_coding	113966192,113962232,113960059,113959865,113959212,113957782,113955131,113952512,113950083,113948833,113947334,113946354,113945828,113942324,113939960,113937007,113927054,113924697,113920611,113918392,113914969,113858791,113844668,113822057	113966371,113962414,113960178,113959903,113959404,113958050,113955211,113952590,113950154,113949036,113947464,113946475,113945924,113942434,113940160,113937136,113927229,113924757,113920690,113918447,113915085,113858896,113844788,113823321	Gene ID= ENSG00000122965.10 TPM= 33.47 Transcript Type= protein_coding
chr12	113816742	113966306	113816742	113966306	-	ENST00000545145.6@RBM19	ENST00000545145.6	protein_coding	113966192,113962232,113960059,113959865,113959212,113957782,113955131,113952512,113950083,113948833,113947334,113946354,113945828,113942324,113939960,113937007,113927054,113924697,113920611,113918392,113914969,113858791,113844668,113823209,113816742	113966306,113962414,113960178,113959903,113959404,113958050,113955211,113952590,113950154,113949036,113947464,113946475,113945924,113942434,113940160,113937136,113927229,113924757,113920690,113918447,113915085,113858896,113844788,113823321,113818186	Gene ID= ENSG00000122965.10 TPM= 29.97 Transcript Type= protein_coding
chr12	113822054	113966310	113822054	113966310	-	ENST00000392561.7@RBM19	ENST00000392561.7	protein_coding	113966192,113962232,113960059,113959865,113959212,113957782,113955131,113952512,113950083,113948833,113947334,113946354,113945828,113942324,113939960,113937007,113927054,113924697,113920611,113918392,113914969,113858791,113844668,113823209,113822054	113966310,113962414,113960178,113959903,113959404,113958050,113955211,113952590,113950154,113949036,113947464,113946475,113945924,113942434,113940160,113937136,113927229,113924757,113920690,113918447,113915085,113858896,113844788,113823321,113822646	Gene ID= ENSG00000122965.10 TPM= 17.9 Transcript Type= protein_coding
chr12	114353931	114408442	114353931	114408442	-	ENST00000310346.8@TBX5	ENST00000310346.8	protein_coding	114407814,114403752,114401826,114399513,114398573,114394741,114385476,114366165,114353931	114408442,114403936,114401920,114399632,114398720,114394893,114385567,114366391,114356106	Gene ID= ENSG00000089225.19 TPM= 7.01 Transcript Type= protein_coding
chr12	114408754	114412831	114408754	114412831	+	ENST00000528549.1@TBX5-AS1	ENST00000528549.1	antisense_RNA	114408754,114409466	114409007,114412831	Gene ID= ENSG00000255399.3 TPM= 33.86 Transcript Type= antisense_RNA
chr12	114670254	114684164	114670254	114684164	-	ENST00000349155.6@TBX3	ENST00000349155.6	protein_coding	114682812,114680879,114679505,114677580,114676313,114674165,114670254	114684164,114681146,114679651,114677656,114676470,114674835,114672302	Gene ID= ENSG00000135111.15 TPM= 79.4 Transcript Type= protein_coding
chr12	116234825	116277722	116234825	116277722	-	transcript6046.chr12.nic@MED13L	transcript6046.chr12.nic	protein_coding	116277060,116234825	116277722,116237705	Gene ID= ENSG00000123066.7 TPM= 2.34 Transcript Type= NA
chr12	115992401	115994854	115992401	115994854	-	transcript6047.chr12.nnic@NA	transcript6047.chr12.nnic	NA	115992401	115994854	Gene ID= novel_gene_chr12_6048 TPM= 2.34 Transcript Type= NA
chr12	116717070	116738070	116717070	116738070	-	ENST00000547630.1@C12orf49	ENST00000547630.1	protein_coding	116737790,116720296,116719763,116717070	116738070,116720447,116719876,116717893	Gene ID= ENSG00000111412.5 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr12	116713320	116738095	116713320	116738095	-	transcript6082.chr12.nnic@C12orf49	transcript6082.chr12.nnic	protein_coding	116737790,116719763,116713320	116738095,116719876,116717893	Gene ID= ENSG00000111412.5 TPM= 14.01 Transcript Type= NA
chr12	116710185	116738061	116710185	116738061	-	ENST00000261318.4@C12orf49	ENST00000261318.4	protein_coding	116737790,116723067,116720296,116719763,116710185	116738061,116723223,116720447,116719876,116717893	Gene ID= ENSG00000111412.5 TPM= 72.39 Transcript Type= protein_coding
chr12	116965927	116969290	116965927	116969290	-	transcript6103.chr12.nnic@NA	transcript6103.chr12.nnic	NA	116965927	116969290	Gene ID= novel_gene_chr12_6104 TPM= 11.68 Transcript Type= NA
chr12	117031492	117032497	117031492	117032497	+	transcript6105.chr12.nnic@NA	transcript6105.chr12.nnic	NA	117031492	117032497	Gene ID= novel_gene_chr12_6106 TPM= 3.5 Transcript Type= NA
chr12	117038923	117099479	117038923	117099479	-	ENST00000470612.5@TESC	ENST00000470612.5	protein_coding	117099225,117075271,117056806,117049019,117046772,117046559,117041947,117038923	117099479,117075340,117056886,117049158,117046838,117046666,117041994,117039210	Gene ID= ENSG00000088992.17 TPM= 5.84 Transcript Type= nonsense_mediated_decay
chr12	117038924	117099469	117038924	117099469	-	ENST00000335209.11@TESC	ENST00000335209.11	protein_coding	117099225,117075271,117056806,117049019,117046777,117046559,117041947,117038924	117099469,117075340,117056886,117049158,117046838,117046666,117041994,117039210	Gene ID= ENSG00000088992.17 TPM= 7.01 Transcript Type= protein_coding
chr12	117141988	117190531	117141988	117190531	-	ENST00000622495.4@FBXO21	ENST00000622495.4	protein_coding	117190218,117189227,117186477,117177520,117174651,117174205,117172471,117166898,117165485,117157873,117155791,117141988	117190531,117189362,117186571,117177641,117174797,117174341,117172607,117167077,117165617,117158063,117155948,117146277	Gene ID= ENSG00000135108.14 TPM= 5.84 Transcript Type= protein_coding
chr12	117143781	117190471	117143781	117190471	-	ENST00000427718.6@FBXO21	ENST00000427718.6	protein_coding	117190327,117190218,117189227,117186477,117177520,117174651,117174205,117172471,117166898,117165485,117157873,117155791,117143781	117190471,117190277,117189362,117186571,117177641,117174797,117174341,117172607,117167077,117165617,117158063,117155948,117146277	Gene ID= ENSG00000135108.14 TPM= 30.36 Transcript Type= protein_coding
chr12	117145068	117190456	117145068	117190456	-	ENST00000330622.9@FBXO21	ENST00000330622.9	protein_coding	117190218,117189227,117186477,117177520,117174651,117174205,117172471,117166898,117165485,117157873,117155791,117145068	117190456,117189362,117186571,117177641,117174797,117174341,117172607,117167077,117165617,117158084,117155948,117146277	Gene ID= ENSG00000135108.14 TPM= 82.9 Transcript Type= protein_coding
chr12	118032907	118061190	118032907	118061190	-	ENST00000315436.7@WSB2	ENST00000315436.7	protein_coding	118061036,118052310,118043133,118042841,118038288,118036338,118035214,118034986,118032907	118061190,118052478,118043377,118042972,118038388,118036510,118035324,118035093,118034358	Gene ID= ENSG00000176871.8 TPM= 119.09 Transcript Type= protein_coding
chr12	118058702	118061185	118058702	118061185	-	transcript6143.chr12.nnic@NA	transcript6143.chr12.nnic	NA	118058702	118061185	Gene ID= novel_gene_chr12_6144 TPM= 2.34 Transcript Type= NA
chr12	118069426	118104011	118069426	118104011	-	transcript6155.chr12.nic@VSIG10	transcript6155.chr12.nic	protein_coding	118103593,118095533,118082127,118079346,118073699,118069426	118104011,118095814,118082429,118079606,118073992,118071469	Gene ID= ENSG00000176834.13 TPM= 3.5 Transcript Type= NA
chr12	118101605	118103885	118101605	118103885	-	ENST00000612851.1@VSIG10	ENST00000612851.1	protein_coding	118103593,118101605	118103885,118103176	Gene ID= ENSG00000176834.13 TPM= 7.01 Transcript Type= retained_intron
chr12	118135858	118145584	118135858	118145584	+	ENST00000261313.2@PEBP1	ENST00000261313.2	protein_coding	118135858,118138039,118139451,118144586	118136344,118138148,118139551,118145584	Gene ID= ENSG00000089220.4 TPM= 635.75 Transcript Type= protein_coding
chr12	118150957	118372936	118150957	118372936	-	transcript6176.chr12.nic@TAOK3	transcript6176.chr12.nic	protein_coding	118372648,118266655,118261497,118255448,118244894,118243415,118239227,118238073,118235558,118233674,118214017,118212914,118201296,118199051,118189807,118181371,118177201,118172457,118161788,118160146,118152227,118150957	118372936,118266759,118261673,118255655,118244965,118243516,118239272,118238169,118235671,118233765,118214110,118212995,118201463,118199257,118189941,118181607,118177329,118172660,118162027,118160358,118152409,118151158	Gene ID= ENSG00000135090.13 TPM= 5.84 Transcript Type= NA
chr12	118149801	118372945	118149801	118372945	-	ENST00000392533.7@TAOK3	ENST00000392533.7	protein_coding	118372648,118266655,118255448,118244894,118243415,118239227,118238073,118235558,118233674,118214017,118212914,118201296,118199051,118189807,118181371,118177201,118172457,118161788,118160146,118152227,118149801	118372945,118266759,118255655,118244965,118243516,118239272,118238169,118235671,118233765,118214110,118212995,118201463,118199257,118189941,118181607,118177329,118172660,118162027,118160358,118152409,118151158	Gene ID= ENSG00000135090.13 TPM= 4.09 Transcript Type= protein_coding
chr12	118150957	118359124	118150957	118359124	-	transcript6178.chr12.nic@TAOK3	transcript6178.chr12.nic	protein_coding	118358919,118266655,118255448,118244894,118243415,118239227,118238073,118235558,118233674,118214017,118212914,118201296,118199051,118189807,118181371,118177201,118172457,118161788,118160146,118152227,118150957	118359124,118266759,118255655,118244965,118243516,118239272,118238169,118235671,118233765,118214110,118212995,118201463,118199257,118189941,118181607,118177329,118172660,118162027,118160358,118152409,118151158	Gene ID= ENSG00000135090.13 TPM= 12.84 Transcript Type= NA
chr12	118149801	118359720	118149801	118359720	-	ENST00000419821.6@TAOK3	ENST00000419821.6	protein_coding	118359506,118266655,118255448,118244894,118243415,118239227,118238073,118235558,118233674,118214017,118212914,118201296,118199051,118189807,118181371,118177201,118172457,118161788,118160146,118152227,118149801	118359720,118266759,118255655,118244965,118243516,118239272,118238169,118235671,118233765,118214110,118212995,118201463,118199257,118189941,118181607,118177329,118172660,118162027,118160358,118152409,118151158	Gene ID= ENSG00000135090.13 TPM= 4.09 Transcript Type= protein_coding
chr12	118246084	118246962	118246084	118246962	+	ENST00000488803.1@AC026366.1	ENST00000488803.1	processed_pseudogene	118246084	118246962	Gene ID= ENSG00000240342.3 TPM= 17.51 Transcript Type= processed_pseudogene
chr12	118376380	118418031	118376380	118418031	+	ENST00000543473.1@SUDS3	ENST00000543473.1	protein_coding	118376380,118380162,118384012,118386114,118389927,118391126,118400659,118401759,118401983,118403412,118411073,118414335	118376833,118380231,118384067,118386185,118389946,118391282,118400754,118401820,118402004,118403517,118411157,118418031	Gene ID= ENSG00000111707.11 TPM= 14.01 Transcript Type= protein_coding
chr12	119178642	119194748	119178642	119194748	+	ENST00000281938.6@HSPB8	ENST00000281938.6	protein_coding	119178642,119187025,119193699	119179679,119187088,119194748	Gene ID= ENSG00000152137.6 TPM= 281.39 Transcript Type= protein_coding
chr12	119667868	119681619	119667868	119681619	+	transcript6206.chr12.nnic@PRKAB1	transcript6206.chr12.nnic	protein_coding	119667868,119672301,119673964,119674340,119676537,119679433,119679933,119680248	119668403,119672464,119674057,119674454,119676670,119679502,119680001,119681619	Gene ID= ENSG00000111725.10 TPM= 4.96 Transcript Type= NA
chr12	119667917	119681619	119667917	119681619	+	transcript6207.chr12.nic@PRKAB1	transcript6207.chr12.nic	protein_coding	119667917,119671495,119672301,119673964,119674340,119676537,119679933,119680248	119668403,119671668,119672464,119674057,119674454,119676670,119680001,119681619	Gene ID= ENSG00000111725.10 TPM= 11.77 Transcript Type= NA
chr12	119667864	119681624	119667864	119681624	+	ENST00000541640.5@PRKAB1	ENST00000541640.5	protein_coding	119667864,119668236,119672301,119673964,119674340,119676537,119679933,119680248	119668045,119668403,119672464,119674057,119674454,119676670,119680001,119681624	Gene ID= ENSG00000111725.10 TPM= 8.85 Transcript Type= protein_coding
chr12	119667753	119681630	119667753	119681630	+	ENST00000229328.9@PRKAB1	ENST00000229328.9	protein_coding	119667753,119672301,119673964,119674340,119676537,119679933,119680248	119668403,119672464,119674057,119674454,119676670,119680001,119681630	Gene ID= ENSG00000111725.10 TPM= 108.68 Transcript Type= protein_coding
chr12	119989005	120094494	119989005	120094494	+	transcript6217.chr12.nic@BICDL1	transcript6217.chr12.nic	protein_coding	119989005,119998521,120061710,120064733,120071622,120072511,120074443,120080887,120089951,120093000	119990297,119998736,120061826,120064879,120071801,120072729,120074586,120081017,120090071,120094494	Gene ID= ENSG00000135127.11 TPM= 5.84 Transcript Type= NA
chr12	119989212	120094494	119989212	120094494	+	transcript6222.chr12.nic@BICDL1	transcript6222.chr12.nic	protein_coding	119989212,119998521,120061710,120064733,120071622,120080887,120089951,120093000	119990297,119998736,120061826,120064879,120071801,120081017,120090071,120094494	Gene ID= ENSG00000135127.11 TPM= 8.17 Transcript Type= NA
chr12	120064598	120094494	120064598	120094494	+	transcript6223.chr12.nic@BICDL1	transcript6223.chr12.nic	protein_coding	120064598,120071622,120072511,120074443,120080887,120089951,120093000	120064879,120071801,120072729,120074586,120081017,120090071,120094494	Gene ID= ENSG00000135127.11 TPM= 7.01 Transcript Type= NA
chr12	120116907	120119000	120116907	120119000	+	ENST00000611079.1@AC004812.2	ENST00000611079.1	antisense_RNA	120116907	120119000	Gene ID= ENSG00000277283.1 TPM= 2.34 Transcript Type= antisense_RNA
chr12	120196702	120201110	120196702	120201110	-	ENST00000546989.5@RPLP0	ENST00000546989.5	protein_coding	120201083,120200730,120199310,120199118,120198854,120198554,120197322,120196702	120201110,120200831,120199485,120199205,120199000,120198631,120197462,120196934	Gene ID= ENSG00000089157.15 TPM= 13.49 Transcript Type= protein_coding
chr12	120196686	120201211	120196686	120201211	-	ENST00000392514.8@RPLP0	ENST00000392514.8	protein_coding	120201083,120200730,120199310,120199118,120198854,120198554,120197322,120196686	120201211,120200831,120199485,120199205,120199000,120198739,120197462,120196934	Gene ID= ENSG00000089157.15 TPM= 1436 Transcript Type= protein_coding
chr12	120196702	120201107	120196702	120201107	-	ENST00000313104.9@RPLP0	ENST00000313104.9	protein_coding	120201083,120200730,120199310,120199118,120198854,120197322,120196702	120201107,120200831,120199485,120199205,120199000,120197462,120196934	Gene ID= ENSG00000089157.15 TPM= 47.35 Transcript Type= protein_coding
chr12	120196708	120201110	120196708	120201110	-	ENST00000549098.5@RPLP0	ENST00000549098.5	protein_coding	120201083,120200719,120199310,120199118,120198854,120198554,120197322,120196708	120201110,120200831,120199485,120199205,120199000,120198739,120197462,120196934	Gene ID= ENSG00000089157.15 TPM= 31.91 Transcript Type= nonsense_mediated_decay
chr12	120196699	120201099	120196699	120201099	-	ENST00000551150.5@RPLP0	ENST00000551150.5	protein_coding	120200730,120199310,120199118,120198854,120198554,120197322,120196699	120201099,120199485,120199205,120199000,120198739,120197462,120196934	Gene ID= ENSG00000089157.15 TPM= 154.17 Transcript Type= protein_coding
chr12	120196707	120201110	120196707	120201110	-	ENST00000552461.5@RPLP0	ENST00000552461.5	protein_coding	120199310,120199118,120198854,120198554,120197322,120196707	120201110,120199205,120199000,120198739,120197462,120196934	Gene ID= ENSG00000089157.15 TPM= 6.78 Transcript Type= retained_intron
chr12	120201303	120210548	120201303	120210548	+	transcript6298.chr12.nic@PXN-AS1	transcript6298.chr12.nic	antisense_RNA	120201303,120206545,120209839	120201426,120206621,120210548	Gene ID= ENSG00000255857.5 TPM= 2.34 Transcript Type= NA
chr12	120201303	120208380	120201303	120208380	+	transcript6299.chr12.nic@PXN-AS1	transcript6299.chr12.nic	antisense_RNA	120201303,120206545	120201426,120208380	Gene ID= ENSG00000255857.5 TPM= 2.34 Transcript Type= NA
chr12	120212327	120212769	120212327	120212769	+	ENST00000620336.1@PXN-AS1	ENST00000620336.1	antisense_RNA	120212327	120212769	Gene ID= ENSG00000255857.5 TPM= 1.17 Transcript Type= antisense_RNA
chr12	120210447	120226037	120210447	120226037	-	transcript6278.chr12.nic@PXN	transcript6278.chr12.nic	protein_coding	120225909,120224151,120223718,120222863,120222549,120221623,120215560,120215103,120214825,120214136,120213842,120210447	120226037,120224377,120223833,120222999,120222750,120221758,120215661,120215273,120214998,120214217,120213990,120212580	Gene ID= ENSG00000089159.16 TPM= 107.22 Transcript Type= NA
chr12	120218043	120265783	120218043	120265783	-	transcript6291.chr12.nic@PXN	transcript6291.chr12.nic	protein_coding	120265617,120224151,120223718,120222863,120222549,120218043	120265783,120224377,120223833,120222999,120222750,120221758	Gene ID= ENSG00000089159.16 TPM= 18.1 Transcript Type= NA
chr12	120218043	120265730	120218043	120265730	-	transcript6294.chr12.nnic@PXN	transcript6294.chr12.nnic	protein_coding	120265617,120224151,120223718,120222863,120218043	120265730,120224377,120223833,120222999,120221758	Gene ID= ENSG00000089159.16 TPM= 8.76 Transcript Type= NA
chr12	120210447	120265771	120210447	120265771	-	ENST00000228307.11@PXN	ENST00000228307.11	protein_coding	120265617,120224151,120223718,120222863,120222549,120221623,120215560,120215103,120214825,120214136,120213842,120210447	120265771,120224377,120223833,120222999,120222750,120221758,120215661,120215273,120214998,120214217,120213990,120212580	Gene ID= ENSG00000089159.16 TPM= 109.56 Transcript Type= protein_coding
chr12	120210447	120265771	120210447	120265771	-	ENST00000424649.6@PXN	ENST00000424649.6	protein_coding	120265617,120224151,120223718,120222863,120222549,120221623,120215103,120214825,120214136,120213842,120210447	120265771,120224377,120223833,120222999,120222750,120221758,120215273,120214998,120214217,120213990,120212580	Gene ID= ENSG00000089159.16 TPM= 126.49 Transcript Type= protein_coding
chr12	120322111	120327789	120322111	120327789	-	ENST00000308366.8@PLA2G1B	ENST00000308366.8	protein_coding	120327720,120325861,120324934,120322111	120327789,120326020,120325061,120322317	Gene ID= ENSG00000170890.13 TPM= 10.51 Transcript Type= protein_coding
chr12	120322115	120327779	120322115	120327779	-	ENST00000423423.3@PLA2G1B	ENST00000423423.3	protein_coding	120327720,120325861,120322115	120327779,120326020,120322317	Gene ID= ENSG00000170890.13 TPM= 1.17 Transcript Type= protein_coding
chr12	120438090	120440742	120438090	120440742	+	ENST00000229379.2@COX6A1	ENST00000229379.2	protein_coding	120438090,120438379,120440454	120438229,120438521,120440742	Gene ID= ENSG00000111775.2 TPM= 128.44 Transcript Type= protein_coding
chr12	120443961	120446412	120443961	120446412	-	ENST00000546954.1@TRIAP1	ENST00000546954.1	protein_coding	120446226,120443961	120446412,120444955	Gene ID= ENSG00000170855.3 TPM= 25.69 Transcript Type= protein_coding
chr12	120446438	120463749	120446438	120463749	+	ENST00000551765.5@GATC	ENST00000551765.5	protein_coding	120446438,120446657,120457076,120459907	120446561,120446829,120457179,120463749	Gene ID= ENSG00000257218.5 TPM= 9.34 Transcript Type= protein_coding
chr12	120461668	120469793	120461668	120469793	-	ENST00000229390.7@SRSF9	ENST00000229390.7	protein_coding	120469422,120465627,120463950,120461668	120469793,120465787,120464122,120462162	Gene ID= ENSG00000111786.8 TPM= 155.29 Transcript Type= protein_coding
chr12	120461668	120469760	120461668	120469760	-	transcript6372.chr12.nic@SRSF9	transcript6372.chr12.nic	protein_coding	120469422,120463950,120461668	120469760,120465787,120462162	Gene ID= ENSG00000111786.8 TPM= 8.17 Transcript Type= NA
chr12	120461672	120469760	120461672	120469760	-	transcript6373.chr12.nic@SRSF9	transcript6373.chr12.nic	protein_coding	120469422,120465627,120461672	120469760,120465787,120464122	Gene ID= ENSG00000111786.8 TPM= 3.5 Transcript Type= NA
chr12	120496056	120498493	120496056	120498493	+	ENST00000242577.10@DYNLL1	ENST00000242577.10	protein_coding	120496056,120496416,120498073	120496216,120496553,120498493	Gene ID= ENSG00000088986.10 TPM= 63.44 Transcript Type= protein_coding
chr12	120469850	120498493	120469850	120498493	+	ENST00000392509.6@DYNLL1	ENST00000392509.6	protein_coding	120469850,120496416,120498073	120470104,120496553,120498493	Gene ID= ENSG00000088986.10 TPM= 2.72 Transcript Type= protein_coding
chr12	120496091	120498491	120496091	120498491	+	ENST00000392508.2@DYNLL1	ENST00000392508.2	protein_coding	120496091,120496402,120498073	120496216,120496553,120498491	Gene ID= ENSG00000088986.10 TPM= 10.89 Transcript Type= protein_coding
chr12	120490328	120495940	120490328	120495940	-	ENST00000500741.2@NRAV	ENST00000500741.2	antisense_RNA	120495823,120490328	120495940,120492110	Gene ID= ENSG00000248008.2 TPM= 4.67 Transcript Type= antisense_RNA
chr12	120503274	120529165	120503274	120529165	-	transcript6356.chr12.nic@COQ5	transcript6356.chr12.nic	protein_coding	120528940,120526457,120522214,120516567,120510017,120504895,120503970,120503274	120529165,120526546,120522363,120516788,120510123,120504983,120504081,120503885	Gene ID= ENSG00000110871.14 TPM= 3.5 Transcript Type= NA
chr12	120503274	120529182	120503274	120529182	-	ENST00000288532.10@COQ5	ENST00000288532.10	protein_coding	120528940,120522214,120516567,120510017,120504895,120503970,120503274	120529182,120522363,120516788,120510123,120504983,120504081,120503885	Gene ID= ENSG00000110871.14 TPM= 38.53 Transcript Type= protein_coding
chr12	120534351	120577594	120534351	120577594	+	ENST00000325954.8@RNF10	ENST00000325954.8	protein_coding	120534351,120546405,120552499,120554718,120557282,120557546,120560726,120562945,120563347,120563810,120565072,120565428,120566825,120571191,120575631,120575792,120576590	120534968,120546601,120552698,120554808,120557466,120557682,120560886,120563070,120563623,120563943,120565189,120565529,120566980,120571291,120575688,120575950,120577594	Gene ID= ENSG00000022840.15 TPM= 30.07 Transcript Type= protein_coding
chr12	120534812	120576886	120534812	120576886	+	ENST00000413266.6@RNF10	ENST00000413266.6	protein_coding	120534812,120546405,120552499,120554718,120557282,120557546,120560726,120562945,120563332,120563810,120565072,120565428,120566825,120571191,120575631,120575792,120576590	120534968,120546601,120552698,120554808,120557466,120557682,120560886,120563070,120563623,120563943,120565189,120565529,120566980,120571291,120575688,120575950,120576886	Gene ID= ENSG00000022840.15 TPM= 23.35 Transcript Type= protein_coding
chr12	120569540	120572358	120569540	120572358	-	transcript6380.chr12.nnic@NA	transcript6380.chr12.nnic	NA	120569540	120572358	Gene ID= novel_gene_chr12_6381 TPM= 4.67 Transcript Type= NA
chr12	120579045	120581403	120579045	120581403	-	transcript6387.chr12.nic@POP5	transcript6387.chr12.nic	protein_coding	120581343,120579514,120579045	120581403,120581257,120579412	Gene ID= ENSG00000167272.10 TPM= 4.67 Transcript Type= NA
chr12	120579045	120581398	120579045	120581398	-	ENST00000357500.4@POP5	ENST00000357500.4	protein_coding	120581343,120581115,120579774,120579514,120579045	120581398,120581257,120579923,120579597,120579412	Gene ID= ENSG00000167272.10 TPM= 28.02 Transcript Type= protein_coding
chr12	120687124	120701859	120687124	120701859	+	transcript6391.chr12.nic@MLEC	transcript6391.chr12.nic	protein_coding	120687124,120694091,120694824,120695095,120696316,120700464	120687531,120694269,120695000,120695152,120696541,120701859	Gene ID= ENSG00000110917.7 TPM= 12.84 Transcript Type= NA
chr12	120686869	120701864	120686869	120701864	+	ENST00000228506.7@MLEC	ENST00000228506.7	protein_coding	120686869,120694091,120694824,120695095,120696316	120687531,120694269,120695000,120695152,120701864	Gene ID= ENSG00000110917.7 TPM= 164.63 Transcript Type= protein_coding
chr12	120710435	120723640	120710435	120723640	+	ENST00000344651.4@UNC119B	ENST00000344651.4	protein_coding	120710435,120713274,120716628,120716870,120719920	120710718,120713387,120716739,120717042,120723640	Gene ID= ENSG00000175970.10 TPM= 26.85 Transcript Type= protein_coding
chr12	120717870	120720239	120717870	120720239	-	transcript6402.chr12.nnic@NA	transcript6402.chr12.nnic	NA	120717870	120720239	Gene ID= novel_gene_chr12_6403 TPM= 10.51 Transcript Type= NA
chr12	120725735	120740008	120725735	120740008	+	ENST00000242592.8@ACADS	ENST00000242592.8	protein_coding	120725735,120727026,120736986,120737356,120737837,120738280,120738533,120738820,120739140,120739296	120725931,120727189,120737135,120737467,120737988,120738450,120738670,120738915,120739196,120740008	Gene ID= ENSG00000122971.8 TPM= 99.25 Transcript Type= protein_coding
chr12	120725789	120740008	120725789	120740008	+	transcript6406.chr12.nic@ACADS	transcript6406.chr12.nic	protein_coding	120725789,120727026,120736986,120737837,120738280,120738533,120738820,120739140,120739296	120725931,120727189,120737467,120737988,120738450,120738670,120738915,120739196,120740008	Gene ID= ENSG00000122971.8 TPM= 14.01 Transcript Type= NA
chr12	120762510	120904371	120762510	120904371	-	ENST00000353487.6@SPPL3	ENST00000353487.6	protein_coding	120903845,120810809,120791469,120784474,120783674,120782655,120768953,120768325,120767394,120766263,120762510	120904371,120810886,120791557,120784593,120783752,120782767,120769059,120768488,120767593,120766372,120765070	Gene ID= ENSG00000157837.15 TPM= 5.84 Transcript Type= protein_coding
chr12	121003020	121016492	121003020	121016492	-	transcript6433.chr12.nic@C12orf43	transcript6433.chr12.nic	protein_coding	121016330,121011104,121010828,121006321,121005003,121003020	121016492,121011146,121010926,121006394,121005093,121004492	Gene ID= ENSG00000157895.11 TPM= 16.35 Transcript Type= NA
chr12	121019111	121039242	121019111	121039242	-	ENST00000257570.9@OASL	ENST00000257570.9	protein_coding	121038774,121033461,121031442,121027576,121023990,121019111	121039242,121033743,121031617,121027817,121024137,121021058	Gene ID= ENSG00000135114.12 TPM= 39.7 Transcript Type= protein_coding
chr12	121020292	121038979	121020292	121038979	-	transcript6441.chr12.nic@OASL	transcript6441.chr12.nic	protein_coding	121038774,121031442,121027576,121023990,121020292	121038979,121031617,121027817,121024137,121021058	Gene ID= ENSG00000135114.12 TPM= 2.34 Transcript Type= NA
chr12	121132828	121188032	121132828	121188032	+	ENST00000328963.9@P2RX7	ENST00000328963.9	protein_coding	121132828,121154785,121156079,121160902,121162424,121165357,121166058,121167488,121175388,121177147,121177297,121180354,121184305	121133095,121154953,121156147,121160974,121162520,121165437,121166187,121167624,121175478,121177212,121177446,121180455,121188032	Gene ID= ENSG00000089041.16 TPM= 16.35 Transcript Type= protein_coding
chr12	121210152	121234106	121210152	121234106	+	transcript6454.chr12.nnic@P2RX4	transcript6454.chr12.nnic	protein_coding	121210152,121217134,121221913,121222094,121222947,121228533,121228725,121228963,121232414,121232611,121232997,121233523	121210298,121217281,121221984,121222166,121223043,121228613,121228866,121229033,121232507,121232676,121233092,121234106	Gene ID= ENSG00000135124.14 TPM= 3.12 Transcript Type= NA
chr12	121209857	121234106	121209857	121234106	+	ENST00000337233.8@P2RX4	ENST00000337233.8	protein_coding	121209857,121217134,121221913,121222094,121222947,121228533,121228725,121228963,121232414,121232611,121232997,121233523	121210298,121217281,121221984,121222166,121223043,121228613,121228866,121229099,121232507,121232676,121233092,121234106	Gene ID= ENSG00000135124.14 TPM= 78.43 Transcript Type= protein_coding
chr12	121210129	121234106	121210129	121234106	+	ENST00000543984.5@P2RX4	ENST00000543984.5	protein_coding	121210129,121221913,121222094,121222947,121228533,121228725,121228963,121232414,121232611,121232997,121233523	121210298,121221984,121222166,121223043,121228613,121228866,121229099,121232507,121232676,121233092,121234106	Gene ID= ENSG00000135124.14 TPM= 2.53 Transcript Type= nonsense_mediated_decay
chr12	121237697	121296791	121237697	121296791	-	transcript6479.chr12.nic@CAMKK2	transcript6479.chr12.nic	protein_coding	121296638,121274056,121270898,121269528,121268638,121263806,121260319,121255783,121255550,121253273,121252661,121249961,121249787,121245140,121237697	121296791,121274585,121270945,121269581,121268689,121263939,121260355,121255804,121255638,121253472,121252714,121250034,121249874,121245240,121240869	Gene ID= ENSG00000110931.18 TPM= 18.1 Transcript Type= NA
chr12	121240525	121296686	121240525	121296686	-	ENST00000412367.6@CAMKK2	ENST00000412367.6	protein_coding	121296638,121274056,121270898,121269528,121268638,121263806,121260319,121255783,121255550,121253273,121252661,121249961,121249787,121248606,121245140,121240525	121296686,121274585,121270945,121269581,121268689,121263939,121260355,121255804,121255638,121253472,121252714,121250034,121249874,121248734,121245240,121240869	Gene ID= ENSG00000110931.18 TPM= 10.51 Transcript Type= protein_coding
chr12	121308357	121352462	121308357	121352462	-	ENST00000261819.7@ANAPC5	ENST00000261819.7	protein_coding	121352134,121347802,121346896,121345839,121342003,121337291,121335533,121331347,121330583,121328316,121327096,121320385,121319697,121318501,121318277,121309701,121308357	121352462,121347881,121347005,121346031,121342069,121337392,121335723,121331428,121330672,121328497,121327231,121320459,121319818,121318608,121318424,121309863,121308691	Gene ID= ENSG00000089053.12 TPM= 58.82 Transcript Type= protein_coding
chr12	121308357	121352452	121308357	121352452	-	transcript6500.chr12.nic@ANAPC5	transcript6500.chr12.nic	protein_coding	121352134,121347802,121346896,121345839,121342003,121337291,121335533,121331347,121330583,121327096,121320385,121319697,121318501,121318277,121309701,121308357	121352452,121347881,121347005,121346031,121342069,121337392,121335723,121331428,121330672,121328458,121320459,121319818,121318608,121318424,121309863,121308691	Gene ID= ENSG00000089053.12 TPM= 7.15 Transcript Type= NA
chr12	121308357	121352388	121308357	121352388	-	ENST00000541887.5@ANAPC5	ENST00000541887.5	protein_coding	121352134,121347802,121346896,121345839,121342003,121337291,121335533,121331347,121330583,121328316,121327096,121320385,121319697,121318501,121318277,121309701,121308357	121352388,121347881,121347005,121346031,121342069,121337392,121335723,121331428,121330672,121328458,121327231,121320459,121319818,121318608,121318424,121309863,121308691	Gene ID= ENSG00000089053.12 TPM= 67 Transcript Type= protein_coding
chr12	121310069	121312728	121310069	121312728	+	transcript6525.chr12.nnic@NA	transcript6525.chr12.nnic	NA	121310069	121312728	Gene ID= novel_gene_chr12_6526 TPM= 5.84 Transcript Type= NA
chr12	121400134	121424348	121400134	121424348	+	transcript6534.chr12.nnic@RNF34	transcript6534.chr12.nnic	protein_coding	121400134,121412430,121416159,121417504,121420242,121420577,121423386	121400218,121412522,121416377,121417911,121420334,121420778,121424348	Gene ID= ENSG00000170633.16 TPM= 2.34 Transcript Type= NA
chr12	121400041	121424351	121400041	121424351	+	ENST00000361234.9@RNF34	ENST00000361234.9	protein_coding	121400041,121416159,121417504,121420242,121420577,121423386	121400218,121416377,121417911,121420334,121420778,121424351	Gene ID= ENSG00000170633.16 TPM= 10.51 Transcript Type= protein_coding
chr12	121400119	121424348	121400119	121424348	+	ENST00000392465.7@RNF34	ENST00000392465.7	protein_coding	121400119,121402742,121416159,121417504,121420242,121420577,121423386	121400218,121402807,121416377,121417911,121420334,121420778,121424348	Gene ID= ENSG00000170633.16 TPM= 2.34 Transcript Type= protein_coding
chr12	121429182	121467386	121429182	121467386	-	transcript6530.chr12.nic@KDM2B	transcript6530.chr12.nic	protein_coding	121467158,121453120,121445275,121444450,121444012,121443680,121442992,121442157,121441070,121440816,121439857,121429182	121467386,121453344,121445418,121444536,121444272,121443793,121443030,121442836,121441233,121440977,121440075,121430469	Gene ID= ENSG00000089094.18 TPM= 12.26 Transcript Type= NA
chr12	121626553	121643107	121626553	121643107	+	transcript6548.chr12.nnic@ORAI1	transcript6548.chr12.nnic	protein_coding	121626553,121641041,121642844	121627050,121642612,121643107	Gene ID= ENSG00000276045.2 TPM= 7.01 Transcript Type= NA
chr12	121626530	121642039	121626530	121642039	+	transcript6552.chr12.nnic@ORAI1	transcript6552.chr12.nnic	protein_coding	121626530,121641041	121626933,121642039	Gene ID= ENSG00000276045.2 TPM= 21.02 Transcript Type= NA
chr12	121626550	121642677	121626550	121642677	+	ENST00000617316.1@ORAI1	ENST00000617316.1	protein_coding	121626550,121641041	121627050,121642677	Gene ID= ENSG00000276045.2 TPM= 5.84 Transcript Type= protein_coding
chr12	121712752	121778956	121712752	121778956	+	ENST00000342607.10@TMEM120B	ENST00000342607.10	protein_coding	121712752,121743629,121748326,121750380,121752128,121761649,121770907,121771488,121773421,121774658,121775062,121775609,121778077	121712964,121743747,121748442,121750439,121752223,121761738,121770972,121771549,121773513,121774722,121775130,121776444,121778956	Gene ID= ENSG00000188735.12 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr12	121712795	121782062	121712795	121782062	+	ENST00000449592.6@TMEM120B	ENST00000449592.6	protein_coding	121712795,121743629,121748326,121750380,121752128,121761649,121770907,121771488,121773421,121774658,121775062,121775609	121712964,121743747,121748442,121750439,121752223,121761738,121770972,121771549,121773513,121774722,121775130,121782062	Gene ID= ENSG00000188735.12 TPM= 15.18 Transcript Type= protein_coding
chr12	121722102	121724277	121722102	121724277	-	transcript6571.chr12.nnic@NA	transcript6571.chr12.nnic	NA	121722102	121724277	Gene ID= novel_gene_chr12_6572 TPM= 4.67 Transcript Type= NA
chr12	121777754	121794262	121777754	121794262	-	ENST00000267205.6@RHOF	ENST00000267205.6	protein_coding	121793496,121793152,121781083,121780872,121777754	121794262,121793239,121781192,121781006,121779662	Gene ID= ENSG00000139725.7 TPM= 113.26 Transcript Type= protein_coding
chr12	121795267	121802580	121795267	121802580	-	transcript6579.chr12.nic@LINC01089	transcript6579.chr12.nic	lincRNA	121799847,121795267	121802580,121796242	Gene ID= ENSG00000212694.8 TPM= 10.51 Transcript Type= NA
chr12	121795272	121797922	121795272	121797922	-	transcript6580.chr12.nnic@NA	transcript6580.chr12.nnic	NA	121795272	121797922	Gene ID= novel_gene_chr12_6581 TPM= 23.35 Transcript Type= NA
chr12	121805656	121807483	121805656	121807483	+	transcript6583.chr12.nnic@NA	transcript6583.chr12.nnic	NA	121805656	121807483	Gene ID= novel_gene_chr12_6584 TPM= 4.67 Transcript Type= NA
chr12	121888731	121918297	121888731	121918297	+	ENST00000541212.5@PSMD9	ENST00000541212.5	protein_coding	121888731,121894739,121899634,121903006,121915856,121916284	121888994,121894841,121899845,121903107,121915944,121918297	Gene ID= ENSG00000110801.13 TPM= 81.73 Transcript Type= protein_coding
chr12	122021886	122060905	122021886	122060905	+	ENST00000261822.4@BCL7A	ENST00000261822.4	protein_coding	122021886,122030700,122035331,122043886,122054805,122059092	122022183,122030781,122035427,122044053,122054926,122060905	Gene ID= ENSG00000110987.8 TPM= 2.34 Transcript Type= protein_coding
chr12	122021978	122044371	122021978	122044371	+	ENST00000432926.2@BCL7A	ENST00000432926.2	protein_coding	122021978,122030700,122035331,122043886	122022183,122030781,122035427,122044371	Gene ID= ENSG00000110987.8 TPM= 1.17 Transcript Type= retained_intron
chr12	122055755	122062042	122055755	122062042	+	transcript6597.chr12.nnic@NA	transcript6597.chr12.nnic	NA	122055755	122062042	Gene ID= novel_gene_chr12_6598 TPM= 4.67 Transcript Type= NA
chr12	122133770	122144418	122133770	122144418	+	transcript6600.chr12.nnic@MLXIP	transcript6600.chr12.nnic	protein_coding	122133770,122135236,122135489,122137469,122138194,122138424,122138815,122140954,122141691	122133987,122135345,122135666,122137590,122138295,122138551,122138938,122141083,122144418	Gene ID= ENSG00000175727.13 TPM= 2.34 Transcript Type= NA
chr12	122078722	122147347	122078722	122147347	+	ENST00000319080.11@MLXIP	ENST00000319080.11	protein_coding	122078722,122127256,122127883,122129137,122129588,122129941,122130844,122132292,122133348,122135224,122135489,122137469,122138194,122138424,122138815,122140954,122141691	122079266,122127362,122127968,122129226,122129629,122130112,122130933,122132383,122133987,122135345,122135666,122137590,122138295,122138551,122138938,122141083,122147347	Gene ID= ENSG00000175727.13 TPM= 58.38 Transcript Type= protein_coding
chr12	122131914	122133972	122131914	122133972	-	transcript6604.chr12.nnic@NA	transcript6604.chr12.nnic	NA	122131914	122133972	Gene ID= novel_gene_chr12_6605 TPM= 26.85 Transcript Type= NA
chr12	122207774	122226055	122207774	122226055	-	transcript6606.chr12.nnic@DIABLO	transcript6606.chr12.nnic	protein_coding	122225965,122224512,122218266,122216759,122216488,122209773,122207774	122226055,122224644,122218397,122216869,122216584,122209858,122208577	Gene ID= ENSG00000184047.16 TPM= 2.34 Transcript Type= NA
chr12	122207669	122227534	122207669	122227534	-	ENST00000443649.7@DIABLO	ENST00000443649.7	protein_coding	122227356,122225965,122224512,122218266,122216759,122216488,122207669	122227534,122226653,122224644,122218397,122216869,122216584,122208577	Gene ID= ENSG00000184047.16 TPM= 5.84 Transcript Type= protein_coding
chr12	122207774	122226052	122207774	122226052	-	ENST00000342392.3@DIABLO	ENST00000342392.3	protein_coding	122225965,122224645,122218266,122216759,122216488,122207774	122226052,122224748,122218397,122216869,122216584,122208577	Gene ID= ENSG00000184047.16 TPM= 8.17 Transcript Type= nonsense_mediated_decay
chr12	122207662	122226052	122207662	122226052	-	ENST00000353548.10@DIABLO	ENST00000353548.10	protein_coding	122225965,122224512,122216759,122216488,122207662	122226052,122224644,122216869,122216584,122208577	Gene ID= ENSG00000184047.16 TPM= 1.17 Transcript Type= protein_coding
chr12	122207767	122210323	122207767	122210323	-	transcript6616.chr12.nnic@NA	transcript6616.chr12.nnic	NA	122207767	122210323	Gene ID= novel_gene_chr12_6617 TPM= 2.34 Transcript Type= NA
chr12	122229564	122266521	122229564	122266521	-	ENST00000267199.8@VPS33A	ENST00000267199.8	protein_coding	122266307,122264134,122263572,122261261,122250983,122249871,122244569,122242382,122239878,122238587,122235786,122232800,122229564	122266521,122264199,122263699,122261447,122251099,122250045,122244762,122242508,122239945,122238724,122235923,122232968,122232427	Gene ID= ENSG00000139719.9 TPM= 15.18 Transcript Type= protein_coding
chr12	122288490	122422645	122288490	122422645	-	transcript6634.chr12.nic@CLIP1	transcript6634.chr12.nic	protein_coding	122422521,122380368,122377389,122363983,122360959,122355115,122354453,122352726,122340753,122336632,122334648,122334027,122332987,122328261,122327947,122319232,122316749,122309762,122288490	122422645,122380558,122377960,122364107,122361181,122355312,122354556,122352786,122341697,122336748,122334705,122334110,122333143,122328426,122328162,122319348,122316855,122309882,122288541	Gene ID= ENSG00000130779.19 TPM= 7.01 Transcript Type= NA
chr12	122472899	122501073	122472899	122501073	-	ENST00000633063.1@ZCCHC8	ENST00000633063.1	protein_coding	122500640,122498827,122492715,122490462,122489386,122483460,122483279,122482635,122481945,122481522,122480190,122478206,122477841,122472899	122501073,122498867,122492789,122490567,122489463,122483563,122483344,122482695,122482087,122481664,122480311,122478292,122477958,122474275	Gene ID= ENSG00000033030.13 TPM= 11.68 Transcript Type= protein_coding
chr12	122505059	122527008	122505059	122527008	-	transcript6664.chr12.nic@RSRC2	transcript6664.chr12.nic	protein_coding	122526848,122522143,122521385,122520504,122518839,122517227,122515105,122511109,122508218,122506834,122505059	122527008,122522299,122521428,122520581,122519029,122517430,122515227,122511188,122508447,122506923,122505706	Gene ID= ENSG00000111011.17 TPM= 4.67 Transcript Type= NA
chr12	122504726	122527008	122504726	122527008	-	transcript6673.chr12.nic@RSRC2	transcript6673.chr12.nic	protein_coding	122526848,122522143,122521385,122518839,122517227,122515105,122511109,122508218,122506834,122504726	122527008,122522299,122521428,122519029,122517430,122515227,122511188,122508450,122506923,122505706	Gene ID= ENSG00000111011.17 TPM= 15.18 Transcript Type= NA
chr12	122504726	122527008	122504726	122527008	-	transcript6680.chr12.nic@RSRC2	transcript6680.chr12.nic	protein_coding	122526848,122522143,122518839,122517227,122515105,122511109,122508218,122506834,122504726	122527008,122522299,122521428,122517430,122515227,122511188,122508447,122506923,122505706	Gene ID= ENSG00000111011.17 TPM= 3.5 Transcript Type= NA
chr12	122505059	122527000	122505059	122527000	-	ENST00000532695.5@RSRC2	ENST00000532695.5	protein_coding	122526848,122522143,122521385,122520504,122518839,122517227,122515105,122511109,122508218,122506834,122505059	122527000,122522299,122521428,122520581,122519029,122517430,122515227,122511188,122508450,122506923,122505706	Gene ID= ENSG00000111011.17 TPM= 8.17 Transcript Type= nonsense_mediated_decay
chr12	122701293	122703343	122701293	122703343	-	ENST00000328880.5@HCAR2	ENST00000328880.5	protein_coding	122701293	122703343	Gene ID= ENSG00000182782.7 TPM= 12.84 Transcript Type= protein_coding
chr12	122714756	122716892	122714756	122716892	-	ENST00000528880.2@HCAR3	ENST00000528880.2	protein_coding	122714756	122716892	Gene ID= ENSG00000255398.2 TPM= 7.01 Transcript Type= protein_coding
chr12	122752808	122771060	122752808	122771060	+	transcript6690.chr12.nnic@DENR	transcript6690.chr12.nnic	protein_coding	122752808,122753693,122762187,122762845,122765304,122767488,122768782,122769034,122769314	122752950,122753807,122762206,122762929,122765387,122767604,122768921,122769293,122771060	Gene ID= ENSG00000139726.10 TPM= 9.14 Transcript Type= NA
chr12	122752774	122771064	122752774	122771064	+	ENST00000280557.10@DENR	ENST00000280557.10	protein_coding	122752774,122753693,122762187,122762845,122765304,122767488,122768782,122769034	122752950,122753807,122762206,122762929,122765387,122767604,122768921,122771064	Gene ID= ENSG00000139726.10 TPM= 59.35 Transcript Type= protein_coding
chr12	122835414	122862960	122835414	122862960	+	transcript6705.chr12.nic@HIP1R	transcript6705.chr12.nic	protein_coding	122835414,122848031,122848466,122848796,122849875,122850835,122851236,122854043,122854905,122855053,122855265,122855551,122855831,122855980,122856256,122856432,122856625,122857021,122858102,122858349,122858838,122859061,122859426,122859772,122860047,122860423,122860679,122860916,122861131,122861308,122861706	122835643,122848094,122848608,122848852,122849955,122850911,122851297,122854183,122854962,122855128,122855405,122855612,122855903,122856163,122856344,122856548,122856726,122857215,122858249,122858435,122858945,122859197,122859536,122859830,122860210,122860523,122860784,122861039,122861192,122861514,122862960	Gene ID= ENSG00000130787.13 TPM= 9.34 Transcript Type= NA
chr12	122835426	122862960	122835426	122862960	+	ENST00000253083.8@HIP1R	ENST00000253083.8	protein_coding	122835426,122848031,122848466,122848796,122849875,122850835,122851236,122854043,122854905,122855053,122855265,122855551,122855831,122855980,122856256,122856432,122856625,122857021,122858102,122858349,122858838,122859061,122859426,122859772,122860047,122860148,122860423,122860679,122860916,122861131,122861308,122861706	122835643,122848094,122848608,122848852,122849955,122850911,122851297,122854183,122854962,122855128,122855405,122855612,122855903,122856163,122856344,122856548,122856726,122857215,122858249,122858435,122858945,122859197,122859536,122859830,122860077,122860210,122860523,122860784,122861039,122861192,122861514,122862960	Gene ID= ENSG00000130787.13 TPM= 67.72 Transcript Type= protein_coding
chr12	122865328	122872031	122865328	122872031	-	transcript6715.chr12.nnic@VPS37B	transcript6715.chr12.nnic	protein_coding	122871898,122871212,122870890,122868480,122865328	122872031,122871396,122871061,122868562,122867607	Gene ID= ENSG00000139722.6 TPM= 13.33 Transcript Type= NA
chr12	122865328	122896124	122865328	122896124	-	transcript6718.chr12.nnic@VPS37B	transcript6718.chr12.nnic	protein_coding	122895952,122879329,122870890,122868480,122865328	122896124,122879505,122871061,122868562,122867607	Gene ID= ENSG00000139722.6 TPM= 13.33 Transcript Type= NA
chr12	122865333	122896103	122865333	122896103	-	transcript6721.chr12.nnic@VPS37B	transcript6721.chr12.nnic	protein_coding	122895952,122870890,122868480,122867349,122865333	122896103,122871061,122868562,122867607,122867010	Gene ID= ENSG00000139722.6 TPM= 5.55 Transcript Type= NA
chr12	122865328	122896444	122865328	122896444	-	ENST00000267202.6@VPS37B	ENST00000267202.6	protein_coding	122895952,122870890,122868480,122865328	122896444,122871061,122868562,122867607	Gene ID= ENSG00000139722.6 TPM= 85.72 Transcript Type= protein_coding
chr12	122870040	122896160	122870040	122896160	-	transcript6727.chr12.nic@VPS37B	transcript6727.chr12.nic	protein_coding	122895952,122870040	122896160,122871061	Gene ID= ENSG00000139722.6 TPM= 2.34 Transcript Type= NA
chr12	122928992	122966496	122928992	122966496	-	ENST00000280560.12@ABCB9	ENST00000280560.12	protein_coding	122966287,122959635,122950451,122949788,122948624,122946025,122944391,122940807,122940111,122935272,122932192,122928992	122966496,122960322,122950565,122949918,122948829,122946222,122944519,122940995,122940284,122935431,122932328,122930171	Gene ID= ENSG00000150967.17 TPM= 1.17 Transcript Type= protein_coding
chr12	122974752	122979438	122974752	122979438	+	ENST00000545612.5@OGFOD2	ENST00000545612.5	protein_coding	122974752,122975811,122976654,122976871,122978360,122978753,122979083	122975121,122975867,122976767,122976970,122978569,122979010,122979438	Gene ID= ENSG00000111325.16 TPM= 2.34 Transcript Type= protein_coding
chr12	122975220	122980041	122975220	122980041	+	ENST00000228922.11@OGFOD2	ENST00000228922.11	protein_coding	122975220,122975811,122976654,122976871,122978442,122978753,122979083	122975383,122975867,122976767,122976970,122978569,122979010,122980041	Gene ID= ENSG00000111325.16 TPM= 9.34 Transcript Type= protein_coding
chr12	122980060	122982913	122980060	122982913	+	ENST00000543566.5@ARL6IP4	ENST00000543566.5	protein_coding	122980060,122981129,122981595,122981957,122982469,122982620	122980745,122981266,122981879,122982074,122982538,122982913	Gene ID= ENSG00000182196.13 TPM= 32.68 Transcript Type= protein_coding
chr12	122980060	122982909	122980060	122982909	+	ENST00000315580.9@ARL6IP4	ENST00000315580.9	protein_coding	122980060,122981129,122981571,122981957,122982469,122982620	122980745,122981299,122981879,122982074,122982538,122982909	Gene ID= ENSG00000182196.13 TPM= 31.51 Transcript Type= protein_coding
chr12	122980189	122982909	122980189	122982909	+	ENST00000453766.6@ARL6IP4	ENST00000453766.6	protein_coding	122980189,122981129,122981595,122981957,122982469,122982620	122980745,122981299,122981879,122982074,122982538,122982909	Gene ID= ENSG00000182196.13 TPM= 29.18 Transcript Type= protein_coding
chr12	122980179	122982908	122980179	122982908	+	ENST00000539770.5@ARL6IP4	ENST00000539770.5	protein_coding	122980179,122981129,122981656,122982031,122982469,122982620	122980745,122981299,122981809,122982074,122982538,122982908	Gene ID= ENSG00000182196.13 TPM= 1.93 Transcript Type= nonsense_mediated_decay
chr12	122980680	122982909	122980680	122982909	+	transcript6757.chr12.nic@ARL6IP4	transcript6757.chr12.nic	protein_coding	122980680,122981129,122981571,122981957,122982469,122982620	122980812,122981266,122981879,122982074,122982538,122982909	Gene ID= ENSG00000182196.13 TPM= 13.25 Transcript Type= NA
chr12	122980680	122982909	122980680	122982909	+	transcript6763.chr12.nic@ARL6IP4	transcript6763.chr12.nic	protein_coding	122980680,122981129,122981571,122981957,122982469,122982620	122980812,122981299,122981879,122982074,122982538,122982909	Gene ID= ENSG00000182196.13 TPM= 26.1 Transcript Type= NA
chr12	122980495	122982909	122980495	122982909	+	ENST00000454885.6@ARL6IP4	ENST00000454885.6	protein_coding	122980495,122981129,122981571,122981957,122982469,122982620	122980887,122981266,122981879,122982074,122982538,122982909	Gene ID= ENSG00000182196.13 TPM= 5.08 Transcript Type= protein_coding
chr12	122980694	122982909	122980694	122982909	+	transcript6786.chr12.nic@ARL6IP4	transcript6786.chr12.nic	protein_coding	122980694,122981129,122981957,122982469	122980745,122981879,122982074,122982909	Gene ID= ENSG00000182196.13 TPM= 8.17 Transcript Type= NA
chr12	122980703	122982860	122980703	122982860	+	ENST00000412505.6@ARL6IP4	ENST00000412505.6	protein_coding	122980703,122981129,122981595,122982031,122982469,122982620	122980812,122981266,122981809,122982074,122982538,122982860	Gene ID= ENSG00000182196.13 TPM= 3.5 Transcript Type= protein_coding
chr12	122980721	122982873	122980721	122982873	+	ENST00000536502.5@ARL6IP4	ENST00000536502.5	protein_coding	122980721,122981595,122981957,122982469,122982620	122981266,122981879,122982074,122982538,122982873	Gene ID= ENSG00000182196.13 TPM= 2.34 Transcript Type= retained_intron
chr12	122980708	122982909	122980708	122982909	+	transcript6790.chr12.nnic@NA	transcript6790.chr12.nnic	NA	122980708	122982909	Gene ID= novel_gene_chr12_6791 TPM= 8.17 Transcript Type= NA
chr12	122983480	123110495	122983480	123110495	-	ENST00000280562.9@PITPNM2	ENST00000280562.9	protein_coding	123110385,123034513,123013828,123012613,123009850,123005240,123004394,123001054,123000778,122997325,122996721,122996458,122995389,122994801,122992499,122991755,122990545,122988724,122988234,122987785,122987511,122987281,122986646,122986436,122983480	123110495,123034685,123014042,123012734,123010077,123005548,123004489,123001158,123000848,122997572,122996910,122996577,122995660,122994979,122992669,122991898,122990709,122988872,122988350,122987901,122987659,122987430,122986829,122986564,122986350	Gene ID= ENSG00000090975.12 TPM= 28.02 Transcript Type= protein_coding
chr12	123154215	123233123	123154215	123233123	-	ENST00000606320.5@MPHOSPH9	ENST00000606320.5	protein_coding	123233075,123230261,123227463,123223038,123221372,123218376,123214744,123210056,123203250,123202624,123202164,123198247,123194386,123181163,123179926,123176688,123166655,123165302,123163950,123163014,123162115,123161136,123160781,123154215	123233123,123230522,123227616,123223127,123221895,123218499,123214834,123210162,123203375,123203084,123202319,123198334,123194601,123181210,123179990,123176789,123166789,123165477,123164090,123163134,123162218,123161383,123160849,123156908	Gene ID= ENSG00000051825.14 TPM= 1.17 Transcript Type= protein_coding
chr12	123232916	123257959	123232916	123257959	+	ENST00000253233.5@C12orf65	ENST00000253233.5	protein_coding	123232916,123253647,123256813	123233531,123253956,123257959	Gene ID= ENSG00000130921.7 TPM= 25.69 Transcript Type= protein_coding
chr12	123260981	123272140	123260981	123272140	-	ENST00000261692.6@CDK2AP1	ENST00000261692.6	protein_coding	123271564,123267185,123265196,123260981	123272140,123267282,123265322,123261803	Gene ID= ENSG00000111328.6 TPM= 286.06 Transcript Type= protein_coding
chr12	123261003	123271141	123261003	123271141	-	ENST00000535979.5@CDK2AP1	ENST00000535979.5	protein_coding	123270887,123267185,123265196,123261003	123271141,123267282,123265322,123261803	Gene ID= ENSG00000111328.6 TPM= 5.84 Transcript Type= protein_coding
chr12	123260971	123268254	123260971	123268254	-	ENST00000618072.4@CDK2AP1	ENST00000618072.4	protein_coding	123268169,123267185,123265196,123260971	123268254,123267282,123265322,123261803	Gene ID= ENSG00000111328.6 TPM= 1.17 Transcript Type= protein_coding
chr12	123320833	123364861	123320833	123364861	-	transcript6828.chr12.nnic@SBNO1	transcript6828.chr12.nnic	protein_coding	123364701,123357809,123350310,123348029,123345258,123340988,123336395,123334053,123331242,123330419,123328734,123327892,123327707,123327426,123326152,123325502,123323680,123321535,123320833	123364861,123357852,123350441,123348133,123345567,123341088,123336491,123334213,123331375,123330509,123328895,123328027,123327812,123327579,123326334,123325599,123323831,123321732,123320866	Gene ID= ENSG00000139697.13 TPM= 5.45 Transcript Type= NA
chr12	123320833	123364869	123320833	123364869	-	transcript6830.chr12.nic@SBNO1	transcript6830.chr12.nic	protein_coding	123364701,123350310,123348029,123345258,123340988,123336395,123334053,123331242,123330419,123328734,123327892,123327707,123327426,123326152,123325502,123323680,123321535,123320833	123364869,123350441,123348133,123345567,123341088,123336491,123334213,123331375,123330509,123328895,123328027,123327812,123327579,123326334,123325599,123323831,123321732,123320866	Gene ID= ENSG00000139697.13 TPM= 12.46 Transcript Type= NA
chr12	123383773	123409358	123383773	123409358	+	ENST00000402868.7@KMT5A	ENST00000402868.7	protein_coding	123383773,123389433,123390630,123395047,123396345,123403573,123404884,123407493	123384208,123389554,123390786,123395266,123396432,123403632,123405074,123409358	Gene ID= ENSG00000183955.12 TPM= 15.75 Transcript Type= protein_coding
chr12	123388874	123409358	123388874	123409358	+	transcript6839.chr12.nnic@KMT5A	transcript6839.chr12.nnic	protein_coding	123388874,123389433,123390630,123395047,123396345,123403573,123404884,123407493	123389182,123389554,123390786,123395266,123396432,123403632,123405074,123409358	Gene ID= ENSG00000183955.12 TPM= 26.26 Transcript Type= NA
chr12	123388917	123409358	123388917	123409358	+	transcript6842.chr12.nic@KMT5A	transcript6842.chr12.nic	protein_coding	123388917,123390630,123395047,123396345,123403573,123404884,123407493	123389182,123390786,123395266,123396432,123403632,123405074,123409358	Gene ID= ENSG00000183955.12 TPM= 24.39 Transcript Type= NA
chr12	123388923	123409358	123388923	123409358	+	transcript6844.chr12.nic@KMT5A	transcript6844.chr12.nic	protein_coding	123388923,123390630,123395047,123396345,123403573,123404884,123407493	123389554,123390786,123395266,123396432,123403632,123405074,123409358	Gene ID= ENSG00000183955.12 TPM= 17.5 Transcript Type= NA
chr12	123401145	123408820	123401145	123408820	+	transcript6856.chr12.nic@KMT5A	transcript6856.chr12.nic	protein_coding	123401145,123404884,123407493	123403632,123405074,123408820	Gene ID= ENSG00000183955.12 TPM= 9.34 Transcript Type= NA
chr12	123415389	123436736	123415389	123436736	-	transcript6858.chr12.nnic@RILPL2	transcript6858.chr12.nnic	protein_coding	123436082,123423044,123415389	123436736,123423157,123415921	Gene ID= ENSG00000150977.10 TPM= 15.18 Transcript Type= NA
chr12	123457641	123466936	123457641	123466936	+	ENST00000526639.2@SNRNP35	ENST00000526639.2	protein_coding	123457641,123465538	123458216,123466936	Gene ID= ENSG00000184209.14 TPM= 19.85 Transcript Type= protein_coding
chr12	123458119	123473154	123458119	123473154	+	ENST00000527158.2@SNRNP35	ENST00000527158.2	protein_coding	123458119,123471092	123458216,123473154	Gene ID= ENSG00000184209.14 TPM= 4.67 Transcript Type= processed_transcript
chr12	123460958	123463497	123460958	123463497	-	transcript6873.chr12.nnic@NA	transcript6873.chr12.nnic	NA	123460958	123463497	Gene ID= novel_gene_chr12_6874 TPM= 9.34 Transcript Type= NA
chr12	123472167	123534103	123472167	123534103	-	transcript6863.chr12.nnic@RILPL1	transcript6863.chr12.nnic	protein_coding	123533174,123523495,123499418,123498544,123485633,123484180,123472167	123534103,123523645,123499536,123498765,123485715,123484272,123472682	Gene ID= ENSG00000188026.12 TPM= 3.5 Transcript Type= NA
chr12	123584531	123598577	123584531	123598577	+	ENST00000262225.7@TMED2	ENST00000262225.7	protein_coding	123584531,123586747,123590342,123596605	123584816,123586939,123590449,123598577	Gene ID= ENSG00000086598.10 TPM= 12.84 Transcript Type= protein_coding
chr12	123602093	123620473	123602093	123620473	+	transcript6886.chr12.nic@DDX55	transcript6886.chr12.nic	protein_coding	123602093,123605931,123606073,123607432,123607600,123608680,123609939,123613170,123615185,123616511,123617758,123618669,123619448,123619964	123602256,123605981,123606159,123607523,123607662,123608829,123610128,123613252,123615316,123616603,123617872,123618837,123619724,123620473	Gene ID= ENSG00000111364.15 TPM= 2.34 Transcript Type= NA
chr12	123602093	123620941	123602093	123620941	+	transcript6888.chr12.nic@DDX55	transcript6888.chr12.nic	protein_coding	123602093,123605931,123606073,123607432,123607600,123608680,123610003,123613170,123615185,123616511,123617758,123618669,123619448,123619964	123602256,123605981,123606159,123607523,123607662,123608829,123610128,123613252,123615316,123616603,123617872,123618837,123619724,123620941	Gene ID= ENSG00000111364.15 TPM= 2.34 Transcript Type= NA
chr12	123602093	123619698	123602093	123619698	+	transcript6894.chr12.nic@DDX55	transcript6894.chr12.nic	protein_coding	123602093,123605931,123606073,123607432,123607600,123608680,123609939,123613170,123615185,123616511,123617758,123618669,123619432	123602256,123605981,123606159,123607523,123607662,123608829,123610128,123613252,123615316,123616603,123617872,123618837,123619698	Gene ID= ENSG00000111364.15 TPM= 7.01 Transcript Type= NA
chr12	123602099	123620941	123602099	123620941	+	ENST00000238146.8@DDX55	ENST00000238146.8	protein_coding	123602099,123605931,123606073,123607432,123607600,123608680,123609939,123613170,123615185,123616511,123617758,123618669,123619432,123619964	123602256,123605981,123606159,123607523,123607662,123608829,123610128,123613252,123615316,123616603,123617872,123618837,123619724,123620941	Gene ID= ENSG00000111364.15 TPM= 7.01 Transcript Type= protein_coding
chr12	123603394	123606988	123603394	123606988	-	transcript6928.chr12.nnic@NA	transcript6928.chr12.nnic	NA	123603394	123606988	Gene ID= novel_gene_chr12_6929 TPM= 8.17 Transcript Type= NA
chr12	123621026	123633708	123621026	123633708	-	transcript6910.chr12.nnic@EIF2B1	transcript6910.chr12.nnic	protein_coding	123633545,123632345,123630397,123630169,123627044,123626425,123624787,123622636,123621708,123621026	123633708,123632446,123630533,123630285,123627156,123626493,123624862,123622761,123621920,123621511	Gene ID= ENSG00000111361.12 TPM= 3.5 Transcript Type= NA
chr12	123621028	123633685	123621028	123633685	-	transcript6916.chr12.nic@EIF2B1	transcript6916.chr12.nic	protein_coding	123633545,123632345,123630397,123630169,123626425,123624787,123622636,123621028	123633685,123632446,123630533,123630285,123627156,123624862,123622761,123621920	Gene ID= ENSG00000111361.12 TPM= 5.84 Transcript Type= NA
chr12	123633779	123662604	123633779	123662604	+	transcript6890.chr12.nnic@GTF2H3	transcript6890.chr12.nnic	protein_coding	123633779,123639264,123645455,123647963,123650994,123652532,123652707,123654924,123655771,123659516,123659795,123660046,123660166,123661864	123633872,123639343,123645561,123648126,123651056,123652561,123652735,123654998,123655824,123659584,123659930,123660082,123661495,123662604	Gene ID= ENSG00000111358.13 TPM= 3.5 Transcript Type= NA
chr12	123633829	123662606	123633829	123662606	+	ENST00000543341.6@GTF2H3	ENST00000543341.6	protein_coding	123633829,123639264,123645455,123647963,123650994,123652532,123652707,123654924,123655771,123659516,123659795,123660046,123660166	123633872,123639343,123645561,123648126,123651056,123652561,123652735,123654998,123655824,123659584,123659930,123660082,123662606	Gene ID= ENSG00000111358.13 TPM= 5.84 Transcript Type= protein_coding
chr12	123633840	123634038	123633840	123634038	+	transcript6926.chr12.nnic@NA	transcript6926.chr12.nnic	NA	123633840	123634038	Gene ID= novel_gene_chr12_6927 TPM= 2.34 Transcript Type= NA
chr12	123695586	123707867	123695586	123707867	+	transcript6933.chr12.nnic@TCTN2	transcript6933.chr12.nnic	protein_coding	123695586,123699702,123704532,123706726,123706985,123707604	123697198,123699810,123704688,123706851,123707073,123707867	Gene ID= ENSG00000168778.11 TPM= 2.34 Transcript Type= NA
chr12	123712318	123761755	123712318	123761755	+	ENST00000330342.7@ATP6V0A2	ENST00000330342.7	protein_coding	123712318,123718623,123722351,123724654,123726197,123727783,123733926,123735531,123737059,123743785,123744201,123744597,123744882,123747607,123748575,123751110,123752283,123754420,123756815,123757927	123712682,123718701,123722448,123724791,123726285,123727909,123734008,123735624,123737271,123743935,123744337,123744784,123744972,123747725,123748785,123751229,123752402,123754537,123756986,123761755	Gene ID= ENSG00000185344.13 TPM= 15.18 Transcript Type= protein_coding
chr12	123729324	123731388	123729324	123731388	-	transcript6946.chr12.nnic@NA	transcript6946.chr12.nnic	NA	123729324	123731388	Gene ID= novel_gene_chr12_6947 TPM= 2.34 Transcript Type= NA
chr12	123936417	123972193	123936417	123972193	-	transcript6949.chr12.nnic@CCDC92	transcript6949.chr12.nnic	protein_coding	123971895,123971740,123956284,123944272,123943347,123942744,123936417	123972193,123971798,123956444,123944364,123943493,123942785,123937830	Gene ID= ENSG00000119242.8 TPM= 29.97 Transcript Type= NA
chr12	123936417	123973093	123936417	123973093	-	transcript6954.chr12.nnic@CCDC92	transcript6954.chr12.nnic	protein_coding	123972529,123944272,123943347,123942744,123936417	123973093,123944354,123943493,123942785,123937830	Gene ID= ENSG00000119242.8 TPM= 38.15 Transcript Type= NA
chr12	123936417	123972443	123936417	123972443	-	transcript6955.chr12.nnic@CCDC92	transcript6955.chr12.nnic	protein_coding	123971895,123944272,123943347,123942744,123936417	123972443,123944364,123943493,123942785,123937830	Gene ID= ENSG00000119242.8 TPM= 32.31 Transcript Type= NA
chr12	123936436	123972734	123936436	123972734	-	ENST00000545891.5@CCDC92	ENST00000545891.5	protein_coding	123972529,123943347,123942744,123936436	123972734,123943493,123942785,123937830	Gene ID= ENSG00000119242.8 TPM= 2.34 Transcript Type= protein_coding
chr12	123969463	123972839	123969463	123972839	-	transcript6963.chr12.nnic@NA	transcript6963.chr12.nnic	NA	123969463	123972839	Gene ID= novel_gene_chr12_6964 TPM= 11.68 Transcript Type= NA
chr12	124424191	124567627	124424191	124567627	-	transcript6971.chr12.nnic@NCOR2	transcript6971.chr12.nnic	protein_coding	124567308,124535565,124495147,124486441,124483596,124472952,124466173,124457106,124449815,124437930,124430615,124429613,124426622,124424191	124567627,124535611,124495368,124486568,124483773,124473131,124466286,124457162,124449867,124437996,124430787,124429706,124426800,124425366	Gene ID= ENSG00000196498.13 TPM= 14.01 Transcript Type= NA
chr12	124776856	124863917	124776856	124863917	-	ENST00000339570.9@SCARB1	ENST00000339570.9	protein_coding	124863595,124817550,124814973,124814202,124811870,124810174,124807761,124800124,124795195,124787406,124786357,124776856	124863917,124817707,124815114,124814405,124811965,124810289,124807927,124800242,124795268,124787457,124786503,124778586	Gene ID= ENSG00000073060.15 TPM= 4.67 Transcript Type= protein_coding
chr12	124777633	124863847	124777633	124863847	-	ENST00000261693.10@SCARB1	ENST00000261693.10	protein_coding	124863595,124817550,124814973,124814202,124811870,124810174,124807761,124800124,124795195,124787406,124786357,124782683,124777633	124863847,124817707,124815114,124814405,124811965,124810289,124807927,124800242,124795268,124787457,124786503,124782811,124778586	Gene ID= ENSG00000073060.15 TPM= 40.87 Transcript Type= protein_coding
chr12	124777627	124780725	124777627	124780725	-	transcript6990.chr12.nnic@NA	transcript6990.chr12.nnic	NA	124777627	124780725	Gene ID= novel_gene_chr12_6991 TPM= 3.5 Transcript Type= NA
chr12	124911648	124915147	124911648	124915147	-	ENST00000339647.5@UBC	ENST00000339647.5	protein_coding	124914587,124911648	124915147,124913774	Gene ID= ENSG00000150991.14 TPM= 1390.6 Transcript Type= protein_coding
chr12	124946826	124989122	124946826	124989122	-	ENST00000539298.1@DHX37	ENST00000539298.1	protein_coding	124988917,124986096,124982511,124980490,124977342,124975419,124972503,124971302,124968867,124968534,124967123,124966793,124965668,124964930,124964394,124960312,124957029,124956691,124954087,124953880,124952398,124950690,124950413,124950149,124949986,124948084,124946826	124989122,124986265,124982623,124980838,124977490,124975511,124972599,124971415,124968968,124968648,124967218,124966878,124965812,124965006,124964626,124960423,124957135,124956879,124954211,124953996,124952570,124950804,124950550,124950243,124950059,124948181,124947887	Gene ID= ENSG00000150990.7 TPM= 19.85 Transcript Type= retained_intron
chr12	125065379	125143320	125065379	125143320	+	ENST00000316519.10@AACS	ENST00000316519.10	protein_coding	125065379,125073876,125076491,125086330,125091426,125102679,125103000,125107121,125114477,125118641,125124705,125124902,125128161,125129335,125134003,125134794,125136662,125142092	125065717,125073979,125076611,125086443,125091523,125102793,125103081,125107268,125114557,125118765,125124769,125125024,125128274,125129460,125134072,125134852,125136864,125143320	Gene ID= ENSG00000081760.16 TPM= 54.29 Transcript Type= protein_coding
chr12	125065377	125143316	125065377	125143316	+	transcript7016.chr12.nnic@AACS	transcript7016.chr12.nnic	protein_coding	125065377,125073876,125076491,125086330,125091426,125102679,125103000,125107121,125114477,125118641,125124705,125128161,125129335,125134003,125134794,125136662,125142092	125065717,125073979,125076611,125086443,125091523,125102793,125103081,125107268,125114557,125118765,125124769,125128274,125129460,125134072,125134852,125136864,125143316	Gene ID= ENSG00000081760.16 TPM= 7.59 Transcript Type= NA
chr12	128793195	128823961	128793195	128823961	-	transcript7031.chr12.nic@SLC15A4	transcript7031.chr12.nic	protein_coding	128823398,128814775,128809943,128809396,128808788,128800854,128799259,128793195	128823961,128815070,128810053,128809473,128808956,128801009,128799417,128794356	Gene ID= ENSG00000139370.11 TPM= 4.87 Transcript Type= NA
chr12	128793195	128824024	128793195	128824024	-	transcript7039.chr12.nnic@SLC15A4	transcript7039.chr12.nnic	protein_coding	128823231,128814775,128809396,128808788,128800854,128799259,128793195	128824024,128815070,128809473,128808956,128801009,128799417,128794356	Gene ID= ENSG00000139370.11 TPM= 3.7 Transcript Type= NA
chr12	128793191	128823983	128793191	128823983	-	ENST00000266771.9@SLC15A4	ENST00000266771.9	protein_coding	128823398,128814775,128809943,128809396,128808788,128800854,128799259,128793191	128823983,128815070,128810111,128809473,128808956,128801009,128799417,128794356	Gene ID= ENSG00000139370.11 TPM= 126.3 Transcript Type= protein_coding
chr12	128853494	128984956	128853494	128984956	+	ENST00000442111.6@GLT1D1	ENST00000442111.6	protein_coding	128853494,128875914,128888639,128899236,128912424,128914933,128926359,128927105,128945326,128947338,128957545,128982929	128853649,128876062,128888744,128899287,128912460,128914989,128926454,128927154,128945369,128947458,128957643,128984956	Gene ID= ENSG00000151948.11 TPM= 1.17 Transcript Type= protein_coding
chr12	130789600	130839297	130789600	130839297	-	transcript7055.chr12.nnic@STX2	transcript7055.chr12.nnic	protein_coding	130839070,130827193,130821689,130812957,130808631,130806982,130804305,130801415,130801153,130798525,130789600	130839297,130827267,130821788,130813031,130808704,130807090,130804543,130801488,130801290,130798635,130791977	Gene ID= ENSG00000111450.13 TPM= 2.92 Transcript Type= NA
chr12	130798393	130839297	130798393	130839297	-	transcript7067.chr12.nic@STX2	transcript7067.chr12.nic	protein_coding	130839070,130827193,130821689,130812957,130808631,130806982,130801415,130801153,130798393	130839297,130827267,130821788,130813031,130808704,130807090,130801488,130801290,130798635	Gene ID= ENSG00000111450.13 TPM= 3.5 Transcript Type= NA
chr12	130802046	130839297	130802046	130839297	-	transcript7071.chr12.nnic@STX2	transcript7071.chr12.nnic	protein_coding	130839070,130827193,130821689,130812957,130808631,130806982,130802046	130839297,130827267,130821788,130813031,130808704,130807090,130804543	Gene ID= ENSG00000111450.13 TPM= 7.01 Transcript Type= NA
chr12	130789600	130839266	130789600	130839266	-	ENST00000261653.10@STX2	ENST00000261653.10	protein_coding	130839070,130827193,130821689,130812957,130808631,130806982,130801415,130801153,130798525,130789600	130839266,130827267,130821788,130813031,130808704,130807090,130801488,130801290,130798635,130791977	Gene ID= ENSG00000111450.13 TPM= 33.86 Transcript Type= protein_coding
chr12	130871879	130877678	130871879	130877678	+	ENST00000543796.5@RAN	ENST00000543796.5	protein_coding	130871879,130872584,130872836,130873003,130874546,130875612,130875882	130872126,130872629,130872920,130873128,130874733,130875782,130877678	Gene ID= ENSG00000132341.11 TPM= 102.16 Transcript Type= protein_coding
chr12	130872037	130877676	130872037	130877676	+	ENST00000448750.7@RAN	ENST00000448750.7	protein_coding	130872037,130872836,130873003,130874546,130875612,130875882	130872126,130872920,130873128,130874733,130875782,130877676	Gene ID= ENSG00000132341.11 TPM= 7.59 Transcript Type= protein_coding
chr12	130872070	130876281	130872070	130876281	+	ENST00000392369.6@RAN	ENST00000392369.6	protein_coding	130872070,130872836,130873003,130874546,130875612,130875882	130872629,130872920,130873128,130874733,130875782,130876281	Gene ID= ENSG00000132341.11 TPM= 9.92 Transcript Type= protein_coding
chr12	130953885	130988219	130953885	130988219	+	transcript7091.chr12.nic@ADGRD1	transcript7091.chr12.nic	protein_coding	130953885,130954624,130966463,130971458,130981884,130987095	130954531,130954660,130966546,130971580,130982063,130988219	Gene ID= ENSG00000111452.12 TPM= 2.34 Transcript Type= NA
chr12	131133618	131141469	131133618	131141469	+	transcript7096.chr12.nic@ADGRD1	transcript7096.chr12.nic	protein_coding	131133618,131136973,131138137,131139168	131136163,131137014,131138229,131141469	Gene ID= ENSG00000111452.12 TPM= 63.05 Transcript Type= NA
chr12	130955125	130956728	130955125	130956728	-	transcript7103.chr12.nnic@NA	transcript7103.chr12.nnic	NA	130955125	130956728	Gene ID= novel_gene_chr12_7104 TPM= 9.34 Transcript Type= NA
chr12	130988306	130992599	130988306	130992599	-	transcript7099.chr12.nic@ADGRD1-AS1	transcript7099.chr12.nic	lincRNA	130992349,130988306	130992599,130991137	Gene ID= ENSG00000256151.1 TPM= 8.17 Transcript Type= NA
chr12	131092884	131096484	131092884	131096484	-	transcript7105.chr12.nnic@NA	transcript7105.chr12.nnic	NA	131092884	131096484	Gene ID= novel_gene_chr12_7106 TPM= 3.5 Transcript Type= NA
chr12	131711079	131778181	131711079	131778181	+	transcript7111.chr12.nic@SFSWAP	transcript7111.chr12.nic	protein_coding	131711079,131714071,131714822,131719454,131725405,131726940,131728293,131753123,131754368,131755386,131756473,131764456,131766118,131778065	131711447,131714193,131714953,131719539,131725630,131727052,131728428,131753363,131754499,131755479,131756644,131764686,131766308,131778181	Gene ID= ENSG00000061936.9 TPM= 3.5 Transcript Type= NA
chr12	131711089	131799737	131711089	131799737	+	ENST00000261674.8@SFSWAP	ENST00000261674.8	protein_coding	131711089,131714071,131714822,131719454,131725405,131726940,131728293,131753123,131754368,131755386,131756473,131764456,131766118,131778065,131786463,131797178,131799037,131799423	131711447,131714240,131714953,131719539,131725630,131727052,131728428,131753363,131754499,131755479,131756644,131764686,131766308,131778330,131786588,131797360,131799109,131799737	Gene ID= ENSG00000061936.9 TPM= 43.2 Transcript Type= protein_coding
chr12	131711100	131778181	131711100	131778181	+	ENST00000535236.5@SFSWAP	ENST00000535236.5	protein_coding	131711100,131719454,131725405,131726940,131728293,131753123,131754368,131755386,131756473,131764456,131766118,131778065	131714953,131719539,131725630,131727052,131728428,131753363,131754499,131755479,131756644,131764686,131766308,131778181	Gene ID= ENSG00000061936.9 TPM= 14.01 Transcript Type= retained_intron
chr12	131828393	131851771	131828393	131851771	+	ENST00000360564.5@MMP17	ENST00000360564.5	protein_coding	131828393,131838195,131838612,131840573,131841624,131843997,131845118,131845297,131849802,131850925	131828653,131838327,131838741,131840856,131841800,131844081,131845200,131845449,131850059,131851771	Gene ID= ENSG00000198598.6 TPM= 8.17 Transcript Type= protein_coding
chr12	131828395	131851771	131828395	131851771	+	transcript7121.chr12.nic@MMP17	transcript7121.chr12.nic	protein_coding	131828395,131838195,131838612,131840573,131841624,131843997,131845118,131845297,131849939,131850925	131828653,131838327,131838741,131840856,131841800,131844081,131845200,131845449,131850059,131851771	Gene ID= ENSG00000198598.6 TPM= 4.67 Transcript Type= NA
chr12	131894651	131923167	131894651	131923167	+	ENST00000321867.5@ULK1	ENST00000321867.5	protein_coding	131894651,131895601,131895783,131906892,131907495,131908644,131908898,131909136,131909775,131909919,131910254,131910712,131911942,131913198,131913747,131914352,131915083,131915335,131915891,131916398,131916953,131917411,131918497,131919212,131919472,131919979,131921100,131921306	131895112,131895693,131895824,131906924,131907531,131908817,131908971,131909237,131909833,131910001,131910304,131910800,131912089,131913258,131913836,131914477,131915231,131915421,131916159,131916591,131917062,131917554,131918681,131919384,131919590,131920136,131921235,131923167	Gene ID= ENSG00000177169.9 TPM= 58.38 Transcript Type= protein_coding
chr12	131929223	131945896	131929223	131945896	+	ENST00000376649.7@PUS1	ENST00000376649.7	protein_coding	131929223,131929907,131932175,131939173,131941292,131943539	131929796,131930135,131932312,131939275,131941983,131945896	Gene ID= ENSG00000177192.13 TPM= 22.18 Transcript Type= protein_coding
chr12	131929200	131943859	131929200	131943859	+	ENST00000443358.6@PUS1	ENST00000443358.6	protein_coding	131929200,131929907,131932175,131939173,131941292,131943539	131929380,131930135,131932312,131939275,131941983,131943859	Gene ID= ENSG00000177192.13 TPM= 4.67 Transcript Type= protein_coding
chr12	131977505	131979039	131977505	131979039	-	transcript7146.chr12.nnic@NA	transcript7146.chr12.nnic	NA	131977505	131979039	Gene ID= novel_gene_chr12_7147 TPM= 3.5 Transcript Type= NA
chr12	132138777	132144328	132138777	132144328	-	transcript7167.chr12.nic@DDX51	transcript7167.chr12.nic	protein_coding	132143993,132143695,132142728,132142277,132142119,132141850,132141498,132140831,132140620,132140423,132140098,132139861,132139635,132138777	132144328,132143909,132142878,132142422,132142190,132141956,132141606,132141420,132140735,132140539,132140199,132139924,132139769,132139298	Gene ID= ENSG00000185163.9 TPM= 3.5 Transcript Type= NA
chr12	132136594	132144335	132136594	132144335	-	ENST00000397333.3@DDX51	ENST00000397333.3	protein_coding	132143993,132143695,132142728,132142277,132142119,132141850,132141498,132141275,132140831,132140620,132140423,132140098,132139861,132139635,132136594	132144335,132143909,132142878,132142422,132142190,132141956,132141606,132141420,132141020,132140735,132140539,132140199,132139924,132139769,132139298	Gene ID= ENSG00000185163.9 TPM= 14.01 Transcript Type= protein_coding
chr12	132144425	132152441	132144425	132152441	+	transcript7181.chr12.nic@NOC4L	transcript7181.chr12.nic	protein_coding	132144425,132144854,132145559,132147281,132147633,132148072,132148609,132148784,132150981,132151258,132151484,132151738,132152084,132152282	132144605,132144974,132145665,132147388,132147979,132148106,132148659,132148895,132151041,132151368,132151644,132151820,132152197,132152441	Gene ID= ENSG00000184967.6 TPM= 2.72 Transcript Type= NA
chr12	132144448	132152441	132144448	132152441	+	ENST00000330579.5@NOC4L	ENST00000330579.5	protein_coding	132144448,132144854,132145559,132147281,132147633,132147880,132148072,132148609,132148784,132150981,132151258,132151484,132151738,132152084,132152282	132144605,132144974,132145665,132147388,132147782,132147979,132148106,132148659,132148895,132151041,132151368,132151644,132151820,132152197,132152441	Gene ID= ENSG00000184967.6 TPM= 36.58 Transcript Type= protein_coding
chr12	132150841	132152473	132150841	132152473	+	ENST00000538784.2@NOC4L	ENST00000538784.2	protein_coding	132150841,132151258,132151484,132151738,132152084,132152282	132151041,132151368,132151644,132151820,132152197,132152473	Gene ID= ENSG00000184967.6 TPM= 7.39 Transcript Type= retained_intron
chr12	132186735	132189695	132186735	132189695	-	ENST00000538731.2@LINC02361	ENST00000538731.2	lincRNA	132189179,132186735	132189695,132187701	Gene ID= ENSG00000256576.2 TPM= 2.34 Transcript Type= lincRNA
chr12	132196509	132329203	132196509	132329203	-	ENST00000328957.12@GALNT9	ENST00000328957.12	protein_coding	132328966,132286250,132262459,132260948,132257689,132247910,132203505,132201124,132199174,132197792,132196509	132329203,132286430,132262625,132261122,132257886,132248027,132203690,132201261,132199269,132197959,132197253	Gene ID= ENSG00000182870.12 TPM= 3.5 Transcript Type= protein_coding
chr12	132571638	132584296	132571638	132584296	+	transcript7188.chr12.nic@FBRSL1	transcript7188.chr12.nic	protein_coding	132571638,132572527,132574090,132574319,132574493,132576799,132581439,132581741,132582062,132582971	132572344,132572622,132574158,132574348,132574564,132576931,132581516,132581824,132582266,132584296	Gene ID= ENSG00000112787.12 TPM= 24.52 Transcript Type= NA
chr12	132548510	132554494	132548510	132554494	+	transcript7195.chr12.nnic@NA	transcript7195.chr12.nnic	NA	132548510	132554494	Gene ID= novel_gene_chr12_7196 TPM= 8.17 Transcript Type= NA
chr12	132565071	132566425	132565071	132566425	+	ENST00000622917.1@AC131212.2	ENST00000622917.1	TEC	132565071	132566425	Gene ID= ENSG00000279700.1 TPM= 1.17 Transcript Type= TEC
chr12	132603149	132605593	132603149	132605593	-	transcript7197.chr12.nnic@NA	transcript7197.chr12.nnic	NA	132603149	132605593	Gene ID= novel_gene_chr12_7198 TPM= 2.34 Transcript Type= NA
chr12	132623762	132687359	132623762	132687359	-	ENST00000320574.9@POLE	ENST00000320574.9	protein_coding	132687254,132681138,132680607,132680178,132679954,132679497,132677578,132677363,132676546,132676094,132675735,132675398,132673575,132673164,132672627,132672215,132668811,132668635,132668356,132667503,132665302,132664370,132664004,132661527,132660969,132659295,132657868,132657349,132657136,132649677,132649306,132648929,132643837,132643407,132643224,132642820,132642506,132642177,132641647,132639125,132638014,132635892,132634186,132632664,132632315,132626117,132625645,132624905,132623762	132687359,132681279,132680687,132680222,132680046,132679651,132677719,132677443,132676653,132676204,132675820,132675517,132673707,132673277,132672839,132672322,132668939,132668737,132668502,132667648,132665450,132664462,132664148,132661684,132661164,132659509,132657970,132657429,132657258,132649889,132649515,132649072,132643977,132643560,132643330,132642996,132642729,132642397,132641851,132639298,132638139,132636024,132634378,132632795,132632508,132626317,132625770,132624994,132624810	Gene ID= ENSG00000177084.16 TPM= 21.02 Transcript Type= protein_coding
chr12	132687606	132704991	132687606	132704991	+	ENST00000317479.7@PXMP2	ENST00000317479.7	protein_coding	132687606,132690263,132695884,132701250,132704619	132687792,132690376,132696046,132701369,132704991	Gene ID= ENSG00000176894.9 TPM= 24.52 Transcript Type= protein_coding
chr12	132710828	132722729	132710828	132722729	+	transcript7208.chr12.nnic@PGAM5	transcript7208.chr12.nnic	protein_coding	132710828,132714858,132717439,132717710,132717987,132720678,132721852	132711067,132715036,132717564,132717798,132718120,132721278,132722729	Gene ID= ENSG00000247077.6 TPM= 5.84 Transcript Type= NA
chr12	132710768	132722734	132710768	132722734	+	transcript7210.chr12.nnic@PGAM5	transcript7210.chr12.nnic	protein_coding	132710768,132714858,132717439,132717710,132717987,132720678,132721814	132711067,132715036,132717564,132717798,132718120,132721304,132722734	Gene ID= ENSG00000247077.6 TPM= 2.34 Transcript Type= NA
chr12	132710768	132722734	132710768	132722734	+	transcript7211.chr12.nnic@PGAM5	transcript7211.chr12.nnic	protein_coding	132710768,132714858,132717439,132717710,132717987,132720678,132721888	132711067,132715036,132717564,132717798,132718120,132721313,132722734	Gene ID= ENSG00000247077.6 TPM= 7.01 Transcript Type= NA
chr12	132710819	132722734	132710819	132722734	+	ENST00000498926.6@PGAM5	ENST00000498926.6	protein_coding	132710819,132714858,132717439,132717710,132717987,132720678	132711067,132715036,132717564,132717798,132718120,132722734	Gene ID= ENSG00000247077.6 TPM= 9.34 Transcript Type= protein_coding
chr12	132725668	132761877	132725668	132761877	-	transcript7223.chr12.nnic@ANKLE2	transcript7223.chr12.nnic	protein_coding	132761618,132754675,132750643,132748138,132747832,132743154,132741419,132736893,132735406,132734385,132729679,132728032,132727223,132725668	132761877,132755133,132750849,132748331,132748020,132743276,132741485,132737065,132735512,132734575,132730270,132728163,132727443,132726583	Gene ID= ENSG00000176915.14 TPM= 4.81 Transcript Type= NA
chr12	132725668	132761832	132725668	132761832	-	transcript7224.chr12.nnic@ANKLE2	transcript7224.chr12.nnic	protein_coding	132761618,132756634,132754675,132750643,132748138,132747832,132743154,132741419,132736893,132735406,132734385,132729679,132728032,132725668	132761832,132756761,132755133,132750849,132748331,132748020,132743276,132741485,132737065,132735512,132734575,132730270,132728163,132727443	Gene ID= ENSG00000176915.14 TPM= 4.04 Transcript Type= NA
chr12	132725503	132761888	132725503	132761888	-	ENST00000357997.9@ANKLE2	ENST00000357997.9	protein_coding	132761618,132754675,132750643,132748138,132747832,132743154,132741419,132736893,132735406,132734385,132729679,132728032,132725503	132761888,132755133,132750849,132748331,132748020,132743276,132741485,132737065,132735512,132734575,132730270,132728163,132727443	Gene ID= ENSG00000176915.14 TPM= 5.21 Transcript Type= protein_coding
chr12	132727133	132761877	132727133	132761877	-	transcript7240.chr12.nnic@ANKLE2	transcript7240.chr12.nnic	protein_coding	132761618,132754675,132750643,132748138,132747832,132743154,132741419,132736893,132735406,132734385,132729679,132728032,132727133	132761877,132755133,132750849,132748331,132748020,132743276,132741485,132737065,132735512,132734496,132730270,132728163,132727443	Gene ID= ENSG00000176915.14 TPM= 3.64 Transcript Type= NA
chr12	132754290	132761877	132754290	132761877	-	transcript7255.chr12.nic@ANKLE2	transcript7255.chr12.nic	protein_coding	132761618,132754290	132761877,132755133	Gene ID= ENSG00000176915.14 TPM= 3.5 Transcript Type= NA
chr12	132840352	132887630	132840352	132887630	-	transcript7265.chr12.nic@CHFR	transcript7265.chr12.nic	protein_coding	132887547,132887196,132877555,132872285,132870724,132869619,132861467,132859068,132857405,132856468,132853431,132851618,132848641,132848085,132847043,132844027,132843011,132840352	132887630,132887340,132877654,132872394,132870783,132869798,132861634,132859227,132857559,132856630,132853573,132851734,132848724,132848155,132847130,132844134,132843083,132841596	Gene ID= ENSG00000072609.17 TPM= 11.09 Transcript Type= NA
chr12	132840352	132887630	132840352	132887630	-	transcript7278.chr12.nic@CHFR	transcript7278.chr12.nic	protein_coding	132887547,132887196,132877555,132872285,132870724,132869619,132861467,132859068,132857405,132856468,132853431,132848641,132848085,132847043,132844027,132843011,132840352	132887630,132887340,132877654,132872394,132870783,132869798,132861634,132859227,132857559,132856630,132853573,132848724,132848155,132847130,132844134,132843083,132841596	Gene ID= ENSG00000072609.17 TPM= 2.92 Transcript Type= NA
chr12	132840352	132887623	132840352	132887623	-	ENST00000450056.6@CHFR	ENST00000450056.6	protein_coding	132887547,132887196,132877555,132872285,132870724,132869619,132861467,132859068,132857405,132856468,132853431,132851618,132848641,132848085,132847043,132844027,132843011,132840352	132887623,132887340,132877654,132872394,132870783,132869798,132861634,132859227,132857559,132856630,132853573,132851737,132848724,132848155,132847130,132844134,132843083,132841596	Gene ID= ENSG00000072609.17 TPM= 24.52 Transcript Type= protein_coding
chr12	132840352	132887603	132840352	132887603	-	ENST00000443047.6@CHFR	ENST00000443047.6	protein_coding	132887547,132887196,132877555,132872285,132861467,132859068,132857405,132856468,132853431,132851618,132848641,132848085,132847043,132844027,132843011,132840352	132887603,132887340,132877654,132872394,132861634,132859227,132857559,132856630,132853573,132851737,132848724,132848155,132847130,132844134,132843083,132841596	Gene ID= ENSG00000072609.17 TPM= 5.84 Transcript Type= protein_coding
chr12	132986365	133012565	132986365	133012565	+	transcript7299.chr12.nnic@ZNF26	transcript7299.chr12.nnic	protein_coding	132986365,132987665,133007042,133007437,133010136	132986873,132987768,133007168,133007532,133012565	Gene ID= ENSG00000198393.7 TPM= 7.01 Transcript Type= NA
chr12	133004404	133012127	133004404	133012127	+	ENST00000534834.1@ZNF26	ENST00000534834.1	protein_coding	133004404,133007437,133010136	133007168,133007532,133012127	Gene ID= ENSG00000198393.7 TPM= 1.17 Transcript Type= protein_coding
chr12	133037292	133063298	133037292	133063298	+	ENST00000392319.6@ZNF84	ENST00000392319.6	protein_coding	133037292,133041285,133047955,133048753,133056954	133037545,133041482,133048081,133048848,133063298	Gene ID= ENSG00000198040.10 TPM= 24.52 Transcript Type= protein_coding
chr12	133037301	133059606	133037301	133059606	+	ENST00000543758.5@ZNF84	ENST00000543758.5	protein_coding	133037301,133041100,133047955,133048753,133056957	133037545,133041482,133048081,133048848,133059606	Gene ID= ENSG00000198040.10 TPM= 2.34 Transcript Type= protein_coding
chr12	133037398	133059606	133037398	133059606	+	transcript7312.chr12.nic@ZNF84	transcript7312.chr12.nic	protein_coding	133037398,133041278,133047955,133056954	133037545,133041482,133048848,133059606	Gene ID= ENSG00000198040.10 TPM= 2.34 Transcript Type= NA
chr12	133037785	133059606	133037785	133059606	+	transcript7314.chr12.nic@ZNF84	transcript7314.chr12.nic	protein_coding	133037785,133047955,133048753,133056954	133041482,133048081,133048848,133059606	Gene ID= ENSG00000198040.10 TPM= 5.84 Transcript Type= NA
chr12	133080914	133085581	133080914	133085581	+	transcript7318.chr12.nnic@ZNF140	transcript7318.chr12.nnic	protein_coding	133080914,133081273,133083103,133083466,133085045	133081072,133081329,133083229,133083561,133085581	Gene ID= ENSG00000196387.9 TPM= 3.5 Transcript Type= NA
chr12	133079838	133107544	133079838	133107544	+	ENST00000355557.6@ZNF140	ENST00000355557.6	protein_coding	133079838,133081273,133083103,133083466,133105510	133081072,133081329,133083229,133083561,133107544	Gene ID= ENSG00000196387.9 TPM= 8.17 Transcript Type= protein_coding
chr12	133080454	133107428	133080454	133107428	+	transcript7325.chr12.nic@ZNF140	transcript7325.chr12.nic	protein_coding	133080454,133083103,133083466,133105510	133081329,133083229,133083561,133107428	Gene ID= ENSG00000196387.9 TPM= 2.34 Transcript Type= NA
chr12	133106817	133130473	133106817	133130473	-	ENST00000537226.2@ZNF891	ENST00000537226.2	protein_coding	133130227,133106817	133130473,133122024	Gene ID= ENSG00000214029.4 TPM= 2.34 Transcript Type= protein_coding
chr12	133130589	133159289	133130589	133159289	+	transcript7331.chr12.nic@ZNF10	transcript7331.chr12.nic	protein_coding	133130589,133130837,133144434,133151028,133151809,133155503	133130754,133131014,133144525,133151154,133151904,133159289	Gene ID= ENSG00000256223.5 TPM= 2.34 Transcript Type= NA
chr12	133130592	133159465	133130592	133159465	+	ENST00000248211.10@ZNF10	ENST00000248211.10	protein_coding	133130592,133144434,133151028,133151809,133155503	133130754,133144525,133151154,133151904,133159465	Gene ID= ENSG00000256223.5 TPM= 1.17 Transcript Type= protein_coding
chr12	133181505	133205173	133181505	133205173	+	transcript7338.chr12.nic@ZNF268	transcript7338.chr12.nic	protein_coding	133181505,133181946,133187872,133191489,133191908,133193428,133202144	133181627,133182030,133188072,133191615,133192003,133193533,133205173	Gene ID= ENSG00000090612.20 TPM= 9.34 Transcript Type= NA
chr12	133181409	133214831	133181409	133214831	+	ENST00000536435.6@ZNF268	ENST00000536435.6	protein_coding	133181409,133181946,133187872,133191489,133191908,133202144	133181686,133182030,133188072,133191615,133192003,133214831	Gene ID= ENSG00000090612.20 TPM= 2.34 Transcript Type= protein_coding
chr12	133181559	133205173	133181559	133205173	+	ENST00000541009.6@ZNF268	ENST00000541009.6	protein_coding	133181559,133181946,133187872,133191489,133191908,133193428,133202144	133181686,133182030,133188072,133191615,133192003,133193533,133205173	Gene ID= ENSG00000090612.20 TPM= 14.01 Transcript Type= protein_coding
chr13	19633696	19672517	19633696	19672517	+	transcript1.chr13.nnic@MPHOSPH8	transcript1.chr13.nnic	protein_coding	19633696,19642115,19646443,19648422,19650003,19658995,19659201,19660152,19661698,19663040,19666425,19668377,19670236,19670840,19671206,19671834	19633961,19642270,19647291,19648521,19650260,19659120,19659289,19660320,19661838,19663126,19666579,19668531,19670363,19670964,19671289,19672517	Gene ID= ENSG00000196199.13 TPM= 2.34 Transcript Type= NA
chr13	19633642	19672517	19633642	19672517	+	transcript3.chr13.nnic@MPHOSPH8	transcript3.chr13.nnic	protein_coding	19633642,19642115,19646443,19648422,19650003,19658995,19659201,19660152,19661698,19663040,19666425,19668377,19670236,19671206,19671834	19633961,19642270,19647291,19648521,19650260,19659120,19659289,19660320,19661838,19663126,19666579,19668531,19670363,19671289,19672517	Gene ID= ENSG00000196199.13 TPM= 3.5 Transcript Type= NA
chr13	19633642	19671131	19633642	19671131	+	transcript15.chr13.nic@MPHOSPH8	transcript15.chr13.nic	protein_coding	19633642,19642115,19646443,19648422,19650003,19658995,19659201,19661698,19663040,19666425,19668377,19670236,19670840	19633961,19642270,19647291,19648521,19650260,19659120,19659289,19661838,19663126,19666579,19668531,19670363,19671131	Gene ID= ENSG00000196199.13 TPM= 5.84 Transcript Type= NA
chr13	19633681	19673459	19633681	19673459	+	ENST00000361479.9@MPHOSPH8	ENST00000361479.9	protein_coding	19633681,19642115,19646443,19648422,19650003,19658995,19659201,19661698,19663040,19666425,19668377,19670236,19671206,19671834	19633961,19642270,19647291,19648521,19650260,19659120,19659289,19661838,19663126,19666579,19668531,19670363,19671289,19673459	Gene ID= ENSG00000196199.13 TPM= 2.34 Transcript Type= protein_coding
chr13	19702871	19783019	19702871	19783019	-	ENST00000619300.4@PSPC1	ENST00000619300.4	protein_coding	19782917,19782386,19772242,19759323,19751271,19741565,19730239,19709542,19705662,19702871	19783019,19782791,19772543,19759418,19751467,19741649,19730344,19709599,19705831,19703360	Gene ID= ENSG00000121390.18 TPM= 1.17 Transcript Type= protein_coding
chr13	19675388	19782942	19675388	19782942	-	ENST00000492741.5@PSPC1	ENST00000492741.5	protein_coding	19782386,19772242,19759323,19751271,19741565,19730239,19677724,19675388	19782942,19772543,19759418,19751467,19741649,19730344,19677823,19675653	Gene ID= ENSG00000121390.18 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr13	19674756	19782917	19674756	19782917	-	ENST00000471658.5@PSPC1	ENST00000471658.5	protein_coding	19782386,19772242,19759323,19751271,19741565,19730239,19677724,19674756	19782917,19772543,19759418,19751467,19741649,19730344,19677823,19674984	Gene ID= ENSG00000121390.18 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr13	19702500	19782917	19702500	19782917	-	ENST00000338910.8@PSPC1	ENST00000338910.8	protein_coding	19782386,19772242,19759323,19751271,19741565,19730239,19709542,19705662,19702500	19782917,19772543,19759418,19751467,19741649,19730344,19709599,19705831,19703360	Gene ID= ENSG00000121390.18 TPM= 1.17 Transcript Type= protein_coding
chr13	19823484	19863636	19823484	19863636	-	ENST00000337963.8@ZMYM5	ENST00000337963.8	protein_coding	19863450,19862399,19851689,19851355,19838700,19837656,19835477,19823484	19863636,19862466,19852190,19851448,19838985,19837821,19835689,19825235	Gene ID= ENSG00000132950.18 TPM= 9.34 Transcript Type= protein_coding
chr13	19860631	19862388	19860631	19862388	+	transcript47.chr13.nnic@NA	transcript47.chr13.nnic	NA	19860631	19862388	Gene ID= novel_gene_chr13_48 TPM= 2.34 Transcript Type= NA
chr13	19863858	19865048	19863858	19865048	+	ENST00000620617.1@AL355001.2	ENST00000620617.1	lincRNA	19863858	19865048	Gene ID= ENSG00000275964.1 TPM= 5.84 Transcript Type= lincRNA
chr13	19958670	20091829	19958670	20091829	+	ENST00000610343.4@ZMYM2	ENST00000610343.4	protein_coding	19958670,19959958,19993063,20002850,20005074,20006374,20019547,20026612,20027203,20031319,20034254,20036737,20051433,20052277,20058575,20059447,20061053,20062846,20064451,20066851,20067239,20082016,20082781,20083656,20085822	19958841,19960026,19993919,20003135,20005239,20006586,20019618,20026762,20027318,20031435,20034404,20036909,20051598,20052311,20058704,20059562,20061224,20062971,20064545,20067019,20067390,20082130,20083032,20083776,20091829	Gene ID= ENSG00000121741.16 TPM= 2.34 Transcript Type= protein_coding
chr13	20403671	20525863	20403671	20525863	-	transcript62.chr13.nnic@CRYL1	transcript62.chr13.nnic	protein_coding	20525754,20512443,20489370,20432102,20413282,20404635,20403671	20525863,20512550,20489496,20432296,20413387,20404741,20404242	Gene ID= ENSG00000165475.13 TPM= 5.84 Transcript Type= NA
chr13	20403667	20525857	20403667	20525857	-	ENST00000298248.11@CRYL1	ENST00000298248.11	protein_coding	20525754,20512443,20489370,20439593,20432102,20413282,20404635,20403667	20525857,20512550,20489496,20439754,20432296,20413387,20404741,20404242	Gene ID= ENSG00000165475.13 TPM= 37.36 Transcript Type= protein_coding
chr13	20567138	20691437	20567138	20691437	+	ENST00000319980.10@IFT88	ENST00000319980.10	protein_coding	20567138,20567670,20567885,20574380,20582957,20589811,20590967,20591618,20592335,20596150,20597015,20598651,20599451,20601705,20605035,20615793,20625750,20631016,20638332,20641290,20643455,20644843,20653876,20656365,20663498,20670973,20690705,20691054	20567256,20567785,20567997,20574475,20583019,20589867,20591020,20591681,20592404,20596240,20597119,20598753,20599565,20601933,20605105,20615879,20625849,20631102,20638518,20641398,20643605,20644958,20653928,20656430,20663604,20671039,20690815,20691437	Gene ID= ENSG00000032742.17 TPM= 2.34 Transcript Type= protein_coding
chr13	20567143	20691362	20567143	20691362	+	transcript70.chr13.nic@IFT88	transcript70.chr13.nic	protein_coding	20567143,20567670,20574380,20582957,20589811,20590967,20591618,20592335,20596150,20597015,20598651,20599451,20601705,20605035,20615793,20625750,20631016,20638332,20641290,20643455,20644843,20653876,20656365,20663498,20670973,20690705,20691054	20567256,20567997,20574475,20583019,20589867,20591020,20591681,20592404,20596240,20597119,20598753,20599565,20601933,20605105,20615879,20625849,20631102,20638518,20641398,20643605,20644958,20653928,20656430,20663604,20671039,20690815,20691362	Gene ID= ENSG00000032742.17 TPM= 2.34 Transcript Type= NA
chr13	20567160	20691362	20567160	20691362	+	transcript71.chr13.nnic@IFT88	transcript71.chr13.nnic	protein_coding	20567160,20567885,20574380,20582957,20589811,20590967,20591618,20592335,20596150,20597015,20598651,20599451,20601705,20605035,20615793,20625750,20631016,20638332,20641290,20643455,20644843,20653876,20656365,20663498,20670973,20690705,20691054	20567256,20567997,20574475,20583019,20589867,20591020,20591681,20592404,20596240,20597119,20598753,20599565,20601933,20605105,20615879,20625849,20631102,20638518,20641398,20643605,20644958,20653928,20656430,20663604,20671039,20690815,20691362	Gene ID= ENSG00000032742.17 TPM= 4.67 Transcript Type= NA
chr13	20567069	20691362	20567069	20691362	+	ENST00000351808.9@IFT88	ENST00000351808.9	protein_coding	20567069,20574380,20582957,20589811,20590967,20591618,20592335,20596150,20597015,20598651,20599451,20601705,20605035,20615793,20625750,20631016,20638332,20641290,20643455,20644843,20653876,20656365,20663498,20670973,20690705,20691054	20567256,20574475,20583019,20589867,20591020,20591681,20592404,20596240,20597119,20598753,20599565,20601933,20605105,20615879,20625849,20631102,20638518,20641398,20643605,20644958,20653928,20656430,20663604,20671039,20690815,20691362	Gene ID= ENSG00000032742.17 TPM= 12.84 Transcript Type= protein_coding
chr13	20567161	20691361	20567161	20691361	+	transcript73.chr13.nnic@IFT88	transcript73.chr13.nnic	protein_coding	20567161,20574380,20582957,20589811,20590967,20591618,20592335,20596150,20597015,20598651,20599451,20601705,20605035,20615793,20625750,20631016,20638332,20641290,20643455,20644843,20653876,20656365,20663498,20670973,20691054	20567256,20574475,20583019,20589867,20591020,20591681,20592404,20596240,20597119,20598753,20599565,20601933,20605105,20615879,20625849,20631102,20638518,20641398,20643605,20644958,20653928,20656430,20663604,20671039,20691361	Gene ID= ENSG00000032742.17 TPM= 2.34 Transcript Type= NA
chr13	20703091	20723098	20703091	20723098	+	transcript91.chr13.nic@IL17D	transcript91.chr13.nic	protein_coding	20703091,20703996,20721636	20703320,20704291,20723098	Gene ID= ENSG00000172458.4 TPM= 2.92 Transcript Type= NA
chr13	20703716	20723098	20703716	20723098	+	transcript95.chr13.nic@IL17D	transcript95.chr13.nic	protein_coding	20703716,20721636	20704291,20723098	Gene ID= ENSG00000172458.4 TPM= 7.59 Transcript Type= NA
chr13	20702128	20704314	20702128	20704314	-	transcript97.chr13.nnic@NA	transcript97.chr13.nnic	NA	20702128	20704314	Gene ID= novel_gene_chr13_98 TPM= 57.21 Transcript Type= NA
chr13	20728931	20773962	20728931	20773962	-	transcript88.chr13.nnic@EEF1AKMT1	transcript88.chr13.nnic	protein_coding	20773921,20757455,20731841,20728931	20773962,20757617,20732121,20729216	Gene ID= ENSG00000150456.10 TPM= 2.34 Transcript Type= NA
chr13	20728932	20773962	20728932	20773962	-	transcript92.chr13.nnic@EEF1AKMT1	transcript92.chr13.nnic	protein_coding	20773921,20757455,20728932	20773962,20757617,20729216	Gene ID= ENSG00000150456.10 TPM= 4.67 Transcript Type= NA
chr13	20728931	20902053	20728931	20902053	-	transcript76.chr13.nnic@XPO4	transcript76.chr13.nnic	protein_coding	20901917,20868596,20862969,20862717,20855627,20843770,20842895,20827067,20822132,20821704,20809791,20809083,20808436,20807457,20800831,20800156,20799165,20796764,20796076,20790462,20757455,20737723,20731841,20728931	20902053,20868701,20863139,20862858,20855765,20843886,20843048,20827179,20822289,20821878,20809967,20809225,20808581,20807634,20800990,20800325,20799339,20797057,20796256,20790580,20757617,20737805,20732121,20729216	Gene ID= ENSG00000132953.16 TPM= 3.5 Transcript Type= NA
chr13	20990462	21061586	20990462	21061586	-	transcript101.chr13.nic@LATS2	transcript101.chr13.nic	protein_coding	21061346,21045685,20990462	21061586,21046230,20991404	Gene ID= ENSG00000150457.8 TPM= 2.34 Transcript Type= NA
chr13	20973032	21061547	20973032	21061547	-	ENST00000382592.4@LATS2	ENST00000382592.4	protein_coding	21061346,21045685,20991272,20987881,20983224,20981466,20979691,20973032	21061547,21046230,20991404,20989304,20983806,20981648,20979797,20975364	Gene ID= ENSG00000150457.8 TPM= 43.2 Transcript Type= protein_coding
chr13	20996937	20999877	20996937	20999877	+	transcript102.chr13.nnic@NA	transcript102.chr13.nnic	NA	20996937	20999877	Gene ID= novel_gene_chr13_103 TPM= 2.34 Transcript Type= NA
chr13	21176645	21179084	21176645	21179084	+	ENST00000309594.4@MRPL57	ENST00000309594.4	protein_coding	21176645,21176912	21176717,21179084	Gene ID= ENSG00000173141.4 TPM= 11.68 Transcript Type= protein_coding
chr13	21372571	21459361	21372571	21459361	-	transcript129.chr13.nic@ZDHHC20	transcript129.chr13.nic	protein_coding	21459054,21425652,21421061,21413652,21402797,21401653,21400373,21391722,21387508,21382920,21381434,21378661,21372571	21459361,21425678,21421164,21413772,21402866,21401685,21400493,21391854,21387634,21383009,21381546,21378738,21376655	Gene ID= ENSG00000180776.15 TPM= 4.96 Transcript Type= NA
chr13	21372577	21459302	21372577	21459302	-	transcript134.chr13.nic@ZDHHC20	transcript134.chr13.nic	protein_coding	21459054,21425652,21421061,21413652,21402797,21401653,21400373,21391722,21387508,21382920,21381434,21375107,21372577	21459302,21425678,21421164,21413772,21402866,21401685,21400493,21391854,21387634,21383009,21381549,21376655,21374270	Gene ID= ENSG00000180776.15 TPM= 3.79 Transcript Type= NA
chr13	21372577	21459280	21372577	21459280	-	transcript135.chr13.nnic@ZDHHC20	transcript135.chr13.nnic	protein_coding	21459054,21425652,21421061,21413652,21402797,21401653,21400373,21391722,21387508,21382920,21381434,21375057,21372577	21459280,21425678,21421164,21413772,21402866,21401685,21400493,21391854,21387634,21383009,21381546,21376655,21374334	Gene ID= ENSG00000180776.15 TPM= 3.79 Transcript Type= NA
chr13	21372573	21459369	21372573	21459369	-	ENST00000382466.7@ZDHHC20	ENST00000382466.7	protein_coding	21459054,21425652,21421061,21413652,21402797,21401653,21400373,21391722,21387508,21382920,21381434,21372573	21459369,21425678,21421164,21413772,21402866,21401685,21400493,21391854,21387634,21383009,21381546,21376655	Gene ID= ENSG00000180776.15 TPM= 4.96 Transcript Type= protein_coding
chr13	21492691	21604180	21492691	21604180	-	transcript158.chr13.nnic@MICU2	transcript158.chr13.nnic	protein_coding	21603939,21566797,21539657,21539302,21522603,21521245,21514353,21510004,21492691	21604180,21566944,21539688,21539377,21522650,21521327,21514418,21510101,21493353	Gene ID= ENSG00000165487.13 TPM= 2.34 Transcript Type= NA
chr13	21502151	21604180	21502151	21604180	-	transcript159.chr13.nic@MICU2	transcript159.chr13.nic	protein_coding	21603939,21566797,21539657,21539302,21522603,21521245,21514353,21510004,21502151	21604180,21566944,21539688,21539377,21522650,21521327,21514418,21510101,21503097	Gene ID= ENSG00000165487.13 TPM= 2.34 Transcript Type= NA
chr13	21492700	21604214	21492700	21604214	-	ENST00000382374.8@MICU2	ENST00000382374.8	protein_coding	21603939,21566797,21539657,21539302,21522603,21521245,21514353,21510004,21502926,21496052,21495161,21492700	21604214,21566944,21539688,21539377,21522650,21521327,21514418,21510101,21503097,21496160,21495318,21493353	Gene ID= ENSG00000165487.13 TPM= 52.54 Transcript Type= protein_coding
chr13	23160303	23325165	23160303	23325165	+	transcript163.chr13.nnic@SGCG	transcript163.chr13.nnic	protein_coding	23160303,23203695,23234611,23250630,23279359,23295415,23320637,23324368	23160646,23203889,23234712,23250717,23279478,23295487,23320760,23325165	Gene ID= ENSG00000102683.7 TPM= 9.34 Transcript Type= NA
chr13	23579380	23676093	23579380	23676093	+	ENST00000382263.3@TNFRSF19	ENST00000382263.3	protein_coding	23579380,23590150,23593345,23615867,23626707,23659050,23660365,23667980,23668692,23673372	23579529,23590252,23593455,23616045,23626792,23659214,23660490,23668082,23669097,23676093	Gene ID= ENSG00000127863.15 TPM= 24.52 Transcript Type= protein_coding
chr13	23579360	23669273	23579360	23669273	+	ENST00000382258.8@TNFRSF19	ENST00000382258.8	protein_coding	23579360,23590150,23593345,23615867,23626707,23659050,23660365,23667980,23668692	23579529,23590252,23593455,23616045,23626792,23659214,23660490,23668082,23669273	Gene ID= ENSG00000127863.15 TPM= 2.34 Transcript Type= protein_coding
chr13	23730189	23889419	23730189	23889419	-	ENST00000382172.3@MIPEP	ENST00000382172.3	protein_coding	23889132,23886333,23881699,23879268,23874846,23870013,23869292,23864141,23862302,23858860,23841335,23839649,23837552,23836240,23809850,23805950,23760096,23756545,23730189	23889419,23886506,23881787,23879354,23874909,23870195,23869448,23864189,23862362,23858912,23841488,23839726,23837756,23836349,23809924,23806069,23760217,23756618,23730445	Gene ID= ENSG00000027001.9 TPM= 18.68 Transcript Type= protein_coding
chr13	24160716	24307074	24160716	24307074	+	ENST00000382108.7@SPATA13	ENST00000382108.7	protein_coding	24160716,24222819,24249477,24251718,24284135,24286214,24286765,24288999,24290652,24294739,24297363,24300401,24302598	24160932,24224582,24249842,24251862,24284271,24286393,24286950,24289178,24290884,24294868,24297735,24300475,24307074	Gene ID= ENSG00000182957.15 TPM= 18.1 Transcript Type= protein_coding
chr13	24279563	24307069	24279563	24307069	+	transcript185.chr13.nnic@SPATA13	transcript185.chr13.nnic	protein_coding	24279563,24284135,24286214,24286765,24288999,24290652,24294739,24297363,24300401,24302598	24280154,24284271,24286393,24286950,24289178,24290884,24294868,24297735,24300475,24307069	Gene ID= ENSG00000182957.15 TPM= 8.76 Transcript Type= NA
chr13	24160713	24278769	24160713	24278769	+	transcript187.chr13.nic@SPATA13	transcript187.chr13.nic	protein_coding	24160713,24222819,24249477,24251718,24278614	24160932,24224582,24249842,24251862,24278769	Gene ID= ENSG00000182957.15 TPM= 4.67 Transcript Type= NA
chr13	24420926	24512810	24420926	24512810	-	ENST00000381989.3@PARP4	ENST00000381989.3	protein_coding	24512706,24503645,24501633,24500316,24499301,24498116,24494573,24493596,24492421,24490668,24486168,24484653,24478093,24477701,24475472,24469894,24469024,24459972,24459264,24459044,24456341,24455017,24453587,24452406,24449718,24447016,24446681,24443650,24442590,24441846,24434395,24431377,24426466,24420926	24512810,24503777,24501834,24500382,24499376,24498229,24494722,24493733,24492594,24490828,24486305,24484748,24478276,24477857,24475596,24470025,24469110,24460136,24459310,24459122,24456478,24455212,24453654,24452593,24449817,24447186,24446761,24443730,24442685,24441968,24435474,24431476,24426598,24421314	Gene ID= ENSG00000102699.5 TPM= 65.39 Transcript Type= protein_coding
chr13	24434496	24437859	24434496	24437859	+	transcript197.chr13.nnic@NA	transcript197.chr13.nnic	NA	24434496	24437859	Gene ID= novel_gene_chr13_198 TPM= 12.84 Transcript Type= NA
chr13	24883033	24922880	24883033	24922880	-	ENST00000381884.8@CENPJ	ENST00000381884.8	protein_coding	24922761,24912582,24911946,24909790,24908018,24907091,24905346,24903926,24899419,24892643,24889316,24885606,24885276,24884323,24884161,24883963,24883033	24922880,24913091,24912069,24910086,24908126,24907193,24906960,24904058,24899584,24892867,24889400,24885670,24885386,24884463,24884245,24884083,24883369	Gene ID= ENSG00000151849.14 TPM= 5.84 Transcript Type= protein_coding
chr13	25246201	25288009	25246201	25288009	-	ENST00000381801.5@MTMR6	ENST00000381801.5	protein_coding	25287224,25274071,25267779,25266129,25265819,25261668,25258560,25257736,25257196,25254385,25253764,25251853,25251649,25246201	25288009,25274187,25267941,25266286,25265947,25261802,25258692,25257845,25257321,25254434,25253964,25251984,25251775,25249492	Gene ID= ENSG00000139505.11 TPM= 10.51 Transcript Type= protein_coding
chr13	25247234	25287539	25247234	25287539	-	transcript206.chr13.nnic@MTMR6	transcript206.chr13.nnic	protein_coding	25287224,25274071,25267779,25266129,25265819,25261668,25258560,25257736,25257196,25254385,25253764,25251853,25247234	25287539,25274187,25267941,25266286,25265947,25261802,25258692,25257845,25257321,25254434,25253964,25251984,25249492	Gene ID= ENSG00000139505.11 TPM= 4.67 Transcript Type= NA
chr13	25301625	25342416	25301625	25342416	+	transcript212.chr13.nnic@NUP58	transcript212.chr13.nnic	protein_coding	25301625,25307806,25309247,25312883,25313614,25315357,25319326,25320530,25320919,25324989,25326916,25327430,25331357,25338636,25339965	25301880,25307948,25309282,25313032,25313751,25315467,25319350,25320595,25321093,25325068,25327034,25327512,25331558,25338731,25342416	Gene ID= ENSG00000139496.15 TPM= 2.34 Transcript Type= NA
chr13	25307212	25340909	25307212	25340909	+	transcript214.chr13.nic@NUP58	transcript214.chr13.nic	protein_coding	25307212,25309247,25312883,25313614,25315357,25319326,25320530,25320919,25324989,25326916,25327430,25331357,25336936,25338636,25339965	25307948,25309282,25313032,25313751,25315467,25319350,25320595,25321093,25325068,25327034,25327512,25331558,25337034,25338731,25340909	Gene ID= ENSG00000139496.15 TPM= 2.34 Transcript Type= NA
chr13	25307212	25316180	25307212	25316180	+	transcript219.chr13.nic@NUP58	transcript219.chr13.nic	protein_coding	25307212,25309247,25312883,25313614,25315357	25307948,25309282,25313032,25313751,25316180	Gene ID= ENSG00000139496.15 TPM= 3.5 Transcript Type= NA
chr13	25310520	25316216	25310520	25316216	+	transcript220.chr13.nic@NUP58	transcript220.chr13.nic	protein_coding	25310520,25313614,25315357	25313032,25313751,25316216	Gene ID= ENSG00000139496.15 TPM= 12.84 Transcript Type= NA
chr13	25301524	25342416	25301524	25342416	+	ENST00000381736.7@NUP58	ENST00000381736.7	protein_coding	25301524,25307806,25309247,25312883,25313614,25315357,25319326,25320530,25320919,25324989,25326916,25327430,25331357,25336936,25338636,25339965	25301880,25307948,25309282,25313032,25313751,25315467,25319350,25320595,25321093,25325068,25327034,25327512,25331558,25337034,25338731,25342416	Gene ID= ENSG00000139496.15 TPM= 53.71 Transcript Type= protein_coding
chr13	25301631	25336340	25301631	25336340	+	ENST00000463407.5@NUP58	ENST00000463407.5	protein_coding	25301631,25307806,25309247,25312883,25313614,25315357,25319326,25320530,25320919,25324989,25326916,25327430,25331357	25301880,25307948,25309282,25313032,25313751,25315467,25319350,25320595,25321093,25325068,25327034,25327512,25336340	Gene ID= ENSG00000139496.15 TPM= 3.5 Transcript Type= protein_coding
chr13	26212775	26222322	26212775	26222322	-	transcript232.chr13.nic@RNF6	transcript232.chr13.nic	protein_coding	26221835,26221248,26219457,26218511,26212775	26222322,26221330,26219667,26218606,26215592	Gene ID= ENSG00000127870.16 TPM= 6.52 Transcript Type= NA
chr13	26212768	26222493	26212768	26222493	-	ENST00000381588.8@RNF6	ENST00000381588.8	protein_coding	26222003,26221248,26219457,26218511,26212768	26222493,26221330,26219667,26218606,26215592	Gene ID= ENSG00000127870.16 TPM= 35.71 Transcript Type= protein_coding
chr13	26212762	26221842	26212762	26221842	-	ENST00000346166.7@RNF6	ENST00000346166.7	protein_coding	26221782,26221248,26219457,26218511,26212762	26221842,26221330,26219667,26218606,26215592	Gene ID= ENSG00000127870.16 TPM= 32.98 Transcript Type= protein_coding
chr13	26212775	26221703	26212775	26221703	-	ENST00000381570.7@RNF6	ENST00000381570.7	protein_coding	26221514,26221248,26219457,26218511,26212775	26221703,26221330,26219667,26218606,26215592	Gene ID= ENSG00000127870.16 TPM= 3.01 Transcript Type= protein_coding
chr13	26254139	26405238	26254139	26405238	+	ENST00000381527.7@CDK8	ENST00000381527.7	protein_coding	26254139,26337567,26349072,26353740,26382814,26385211,26393367,26396285,26397153,26400453,26401269,26401466,26403956	26254769,26337642,26349182,26353880,26382871,26385342,26393510,26396354,26397225,26400550,26401347,26401624,26405238	Gene ID= ENSG00000132964.11 TPM= 17.51 Transcript Type= protein_coding
chr13	26557674	26666890	26557674	26666890	+	transcript242.chr13.nic@WASF3	transcript242.chr13.nic	protein_coding	26557674,26612961,26642261,26665028	26557819,26613058,26642403,26666890	Gene ID= ENSG00000132970.12 TPM= 2.34 Transcript Type= NA
chr13	26557750	26688948	26557750	26688948	+	ENST00000335327.5@WASF3	ENST00000335327.5	protein_coding	26557750,26612961,26642261,26665028,26667517,26671872,26676549,26681054,26682607,26685688	26557819,26613058,26642403,26665162,26667670,26671989,26676724,26681320,26682974,26688948	Gene ID= ENSG00000132970.12 TPM= 4.09 Transcript Type= protein_coding
chr13	26557703	26688943	26557703	26688943	+	ENST00000361042.8@WASF3	ENST00000361042.8	protein_coding	26557703,26612961,26642261,26665028,26667517,26671872,26680035,26681054,26682607,26685688	26557819,26613058,26642403,26665162,26667670,26671989,26680201,26681320,26682974,26688943	Gene ID= ENSG00000132970.12 TPM= 15.76 Transcript Type= protein_coding
chr13	27066142	27171896	27066142	27171896	-	ENST00000282344.10@USP12	ENST00000282344.10	protein_coding	27171592,27116516,27105731,27095601,27090082,27089883,27075191,27071071,27066142	27171896,27116596,27105944,27095830,27090158,27089966,27075388,27071149,27069384	Gene ID= ENSG00000152484.13 TPM= 71.22 Transcript Type= protein_coding
chr13	27106421	27109924	27106421	27109924	+	transcript250.chr13.nnic@NA	transcript250.chr13.nnic	NA	27106421	27109924	Gene ID= novel_gene_chr13_251 TPM= 3.5 Transcript Type= NA
chr13	27251309	27256568	27251309	27256568	+	ENST00000311549.10@RPL21	ENST00000311549.10	protein_coding	27251309,27253765,27254220,27255242,27256184,27256436	27251585,27253843,27254281,27255354,27256334,27256568	Gene ID= ENSG00000122026.10 TPM= 188.95 Transcript Type= protein_coding
chr13	27251583	27256568	27251583	27256568	+	ENST00000319826.8@RPL21	ENST00000319826.8	protein_coding	27251583,27253765,27254220,27255242,27256184,27256436	27251850,27253843,27254281,27255354,27256334,27256568	Gene ID= ENSG00000122026.10 TPM= 10.31 Transcript Type= protein_coding
chr13	27251558	27256568	27251558	27256568	+	transcript256.chr13.nic@RPL21	transcript256.chr13.nic	protein_coding	27251558,27253765,27254220,27255242,27256436	27251585,27253843,27254281,27256334,27256568	Gene ID= ENSG00000122026.10 TPM= 3.89 Transcript Type= NA
chr13	27251558	27256563	27251558	27256563	+	transcript257.chr13.nic@RPL21	transcript257.chr13.nic	protein_coding	27251558,27253765,27254220,27255242	27251585,27253843,27254281,27256563	Gene ID= ENSG00000122026.10 TPM= 2.34 Transcript Type= NA
chr13	27254394	27256008	27254394	27256008	-	transcript259.chr13.nnic@NA	transcript259.chr13.nnic	NA	27254394	27256008	Gene ID= novel_gene_chr13_260 TPM= 5.84 Transcript Type= NA
chr13	27424581	27435688	27424581	27435688	+	transcript263.chr13.nnic@GTF3A	transcript263.chr13.nnic	protein_coding	27424581,27427092,27429172,27429870,27430533,27432731,27434139,27434805,27435133,27435433	27424938,27427192,27429389,27429966,27430621,27432804,27434219,27435034,27435192,27435688	Gene ID= ENSG00000122034.14 TPM= 4.67 Transcript Type= NA
chr13	27424544	27435688	27424544	27435688	+	ENST00000381140.8@GTF3A	ENST00000381140.8	protein_coding	27424544,27427092,27429870,27430533,27432731,27434139,27434805,27435133,27435433	27424938,27427192,27429966,27430621,27432804,27434219,27435034,27435192,27435688	Gene ID= ENSG00000122034.14 TPM= 145.95 Transcript Type= protein_coding
chr13	27424662	27435688	27424662	27435688	+	ENST00000419181.5@GTF3A	ENST00000419181.5	protein_coding	27424662,27427092,27429870,27430533,27434139,27434805,27435133,27435433	27424938,27427192,27429966,27430621,27434219,27435034,27435192,27435688	Gene ID= ENSG00000122034.14 TPM= 5.84 Transcript Type= nonsense_mediated_decay
chr13	27435643	27450574	27435643	27450574	-	ENST00000381120.7@MTIF3	ENST00000381120.7	protein_coding	27450509,27445088,27439989,27437116,27435643	27450574,27445156,27440449,27437273,27435893	Gene ID= ENSG00000122033.14 TPM= 10.51 Transcript Type= protein_coding
chr13	27445800	27447213	27445800	27447213	+	transcript280.chr13.nnic@NA	transcript280.chr13.nnic	NA	27445800	27447213	Gene ID= novel_gene_chr13_281 TPM= 2.34 Transcript Type= NA
chr13	27545911	27620578	27545911	27620578	-	transcript282.chr13.nnic@LNX2	transcript282.chr13.nnic	protein_coding	27620018,27581297,27569029,27567640,27562413,27559842,27556236,27553208,27550333,27545911	27620578,27581803,27569276,27567839,27562781,27559985,27556413,27553439,27550491,27548470	Gene ID= ENSG00000139517.7 TPM= 15.18 Transcript Type= NA
chr13	27545911	27620509	27545911	27620509	-	transcript283.chr13.nnic@LNX2	transcript283.chr13.nnic	protein_coding	27620310,27581297,27569029,27567640,27562413,27559842,27556236,27553208,27550333,27545911	27620509,27581803,27569276,27567839,27562781,27559985,27556413,27553439,27550491,27548470	Gene ID= ENSG00000139517.7 TPM= 2.34 Transcript Type= NA
chr13	27545911	27620548	27545911	27620548	-	transcript287.chr13.nnic@LNX2	transcript287.chr13.nnic	protein_coding	27620375,27581297,27569029,27567640,27559842,27556236,27553208,27550333,27545911	27620548,27581803,27569276,27567839,27559985,27556413,27553439,27550491,27548470	Gene ID= ENSG00000139517.7 TPM= 5.84 Transcript Type= NA
chr13	27545911	27620404	27545911	27620404	-	ENST00000316334.4@LNX2	ENST00000316334.4	protein_coding	27620375,27581297,27569029,27567640,27562413,27559842,27556236,27553208,27550333,27545911	27620404,27581803,27569276,27567839,27562781,27559985,27556413,27553439,27550491,27548470	Gene ID= ENSG00000139517.7 TPM= 22.18 Transcript Type= protein_coding
chr13	27620748	27667411	27620748	27667411	+	transcript296.chr13.nic@POLR1D	transcript296.chr13.nic	protein_coding	27620748,27621337,27648379,27665686	27621140,27622009,27648453,27667411	Gene ID= ENSG00000186184.16 TPM= 5.25 Transcript Type= NA
chr13	27620737	27623452	27620737	27623452	+	transcript298.chr13.nic@POLR1D	transcript298.chr13.nic	protein_coding	27620737,27621337,27622875	27621104,27622009,27623452	Gene ID= ENSG00000186184.16 TPM= 5.84 Transcript Type= NA
chr13	27620748	27623452	27620748	27623452	+	transcript299.chr13.nic@POLR1D	transcript299.chr13.nic	protein_coding	27620748,27621337,27622875	27621140,27622009,27623452	Gene ID= ENSG00000186184.16 TPM= 14.01 Transcript Type= NA
chr13	27621422	27623452	27621422	27623452	+	ENST00000302979.4@POLR1D	ENST00000302979.4	protein_coding	27621422,27622875	27622009,27623452	Gene ID= ENSG00000186184.16 TPM= 30.36 Transcript Type= protein_coding
chr13	27621779	27667415	27621779	27667415	+	ENST00000399697.7@POLR1D	ENST00000399697.7	protein_coding	27621779,27648379,27665686	27622009,27648453,27667415	Gene ID= ENSG00000186184.16 TPM= 36.78 Transcript Type= protein_coding
chr13	27621870	27651549	27621870	27651549	+	ENST00000489647.4@POLR1D	ENST00000489647.4	protein_coding	27621870,27648379,27650042	27622009,27648453,27651549	Gene ID= ENSG00000186184.16 TPM= 2.34 Transcript Type= protein_coding
chr13	27621856	27623447	27621856	27623447	+	transcript304.chr13.nnic@NA	transcript304.chr13.nnic	NA	27621856	27623447	Gene ID= novel_gene_chr13_305 TPM= 2.34 Transcript Type= NA
chr13	28136843	28138193	28136843	28138193	-	ENST00000563843.1@PAN3-AS1	ENST00000563843.1	antisense_RNA	28136843	28138193	Gene ID= ENSG00000261485.1 TPM= 1.17 Transcript Type= antisense_RNA
chr13	28300344	28495095	28300344	28495095	-	ENST00000282397.8@FLT1	ENST00000282397.8	protein_coding	28494780,28467521,28466903,28438221,28434058,28433819,28431136,28430050,28427752,28427159,28405780,28396960,28389796,28384885,28357554,28345445,28339168,28334025,28329615,28327462,28322790,28322262,28321463,28319423,28317498,28311993,28311590,28308843,28306678,28300344	28495095,28467617,28467129,28438345,28434220,28433955,28431310,28430167,28427921,28427318,28405894,28397068,28390104,28385031,28357685,28345551,28339300,28334129,28329728,28327550,28322946,28322359,28321585,28319534,28317597,28312098,28311732,28308927,28306772,28303368	Gene ID= ENSG00000102755.11 TPM= 30.36 Transcript Type= protein_coding
chr13	28368096	28495128	28368096	28495128	-	ENST00000541932.5@FLT1	ENST00000541932.5	protein_coding	28494780,28467521,28466903,28438221,28434058,28433819,28431136,28430050,28427752,28427159,28405780,28396960,28389796,28384885,28368096	28495128,28467617,28467129,28438345,28434220,28433955,28431310,28430167,28427921,28427318,28405894,28397068,28390104,28385031,28368663	Gene ID= ENSG00000102755.11 TPM= 4.67 Transcript Type= protein_coding
chr13	28385548	28495079	28385548	28495079	-	ENST00000615840.4@FLT1	ENST00000615840.4	protein_coding	28494780,28467521,28466903,28438221,28434058,28433819,28431136,28430050,28427752,28427159,28405780,28396960,28385548	28495079,28467617,28467129,28438345,28434220,28433955,28431310,28430167,28427921,28427318,28405894,28397068,28390104	Gene ID= ENSG00000102755.11 TPM= 4.67 Transcript Type= protein_coding
chr13	28659104	28678925	28659104	28678925	+	ENST00000380842.4@POMP	ENST00000380842.4	protein_coding	28659104,28662410,28664509,28668473,28672339,28678035	28659187,28662507,28664569,28668574,28672432,28678925	Gene ID= ENSG00000132963.7 TPM= 8.17 Transcript Type= protein_coding
chr13	28700080	28718841	28700080	28718841	-	ENST00000266943.10@SLC46A3	ENST00000266943.10	protein_coding	28718496,28717810,28712680,28710760,28703943,28700080	28718841,28718022,28713550,28710843,28704099,28701581	Gene ID= ENSG00000139508.14 TPM= 24.52 Transcript Type= protein_coding
chr13	29509410	29595688	29509410	29595688	-	ENST00000380752.9@SLC7A1	ENST00000380752.9	protein_coding	29595416,29553761,29535819,29532824,29530538,29524132,29523266,29522317,29519447,29517573,29517144,29516138,29509410	29595688,29553860,29536202,29532982,29530712,29524253,29523488,29522456,29519549,29517790,29517310,29516246,29514583	Gene ID= ENSG00000139514.12 TPM= 23.35 Transcript Type= protein_coding
chr13	29764371	29850684	29764371	29850684	-	ENST00000380680.4@UBL3	ENST00000380680.4	protein_coding	29849512,29777155,29772112,29767618,29764371	29850684,29777263,29772198,29767695,29767307	Gene ID= ENSG00000122042.9 TPM= 92.24 Transcript Type= protein_coding
chr13	29845802	29848305	29845802	29848305	+	transcript346.chr13.nnic@NA	transcript346.chr13.nnic	NA	29845802	29848305	Gene ID= novel_gene_chr13_347 TPM= 35.03 Transcript Type= NA
chr13	30103178	30108868	30103178	30108868	-	ENST00000413591.1@LINC00365	ENST00000413591.1	lincRNA	30108769,30103178	30108868,30105695	Gene ID= ENSG00000224511.1 TPM= 2.34 Transcript Type= lincRNA
chr13	30456704	30465965	30456704	30465965	-	ENST00000341423.9@HMGB1	ENST00000341423.9	protein_coding	30465796,30463531,30463207,30462538,30456704	30465965,30463694,30463352,30462712,30461533	Gene ID= ENSG00000189403.14 TPM= 15.56 Transcript Type= protein_coding
chr13	30459850	30464310	30459850	30464310	-	ENST00000339872.8@HMGB1	ENST00000339872.8	protein_coding	30464161,30463531,30463207,30462538,30459850	30464310,30463694,30463352,30462712,30461533	Gene ID= ENSG00000189403.14 TPM= 9.57 Transcript Type= protein_coding
chr13	30460907	30465242	30460907	30465242	-	ENST00000399494.5@HMGB1	ENST00000399494.5	protein_coding	30465073,30463531,30463207,30462538,30460907	30465242,30463694,30463352,30462712,30461533	Gene ID= ENSG00000189403.14 TPM= 16.35 Transcript Type= protein_coding
chr13	30617783	30659549	30617783	30659549	+	ENST00000255304.8@USPL1	ENST00000255304.8	protein_coding	30617783,30621073,30621764,30630835,30637744,30642628,30646932,30653148,30657474	30618056,30621239,30621892,30631474,30637857,30642757,30647057,30653305,30659549	Gene ID= ENSG00000132952.11 TPM= 1.17 Transcript Type= protein_coding
chr13	30617921	30659549	30617921	30659549	+	transcript379.chr13.nic@USPL1	transcript379.chr13.nic	protein_coding	30617921,30621764,30630835,30637744,30642628,30646932,30653148,30657474	30618056,30621892,30631474,30637857,30642757,30647057,30653305,30659549	Gene ID= ENSG00000132952.11 TPM= 4.67 Transcript Type= NA
chr13	30735508	30764426	30735508	30764426	+	ENST00000380490.4@ALOX5AP	ENST00000380490.4	protein_coding	30735508,30744060,30752052,30755944,30763944	30735675,30744159,30752122,30756025,30764426	Gene ID= ENSG00000132965.9 TPM= 184.48 Transcript Type= protein_coding
chr13	30906191	30925572	30906191	30925572	+	ENST00000380482.8@MEDAG	ENST00000380482.8	protein_coding	30906191,30917403,30921014,30921561,30924311	30906793,30917512,30921126,30921846,30925572	Gene ID= ENSG00000102802.9 TPM= 21.02 Transcript Type= protein_coding
chr13	31136625	31162015	31136625	31162015	-	transcript391.chr13.nic@HSPH1	transcript391.chr13.nic	protein_coding	31161476,31158806,31155514,31154633,31152852,31151609,31150947,31149954,31148374,31147959,31145563,31143792,31141122,31140184,31139000,31138781,31138407,31137368,31136625	31162015,31158863,31155654,31154755,31152951,31151742,31151191,31150182,31148480,31148092,31145768,31143923,31141259,31140309,31139107,31138900,31138568,31137524,31137117	Gene ID= ENSG00000120694.19 TPM= 13.52 Transcript Type= NA
chr13	31136625	31162388	31136625	31162388	-	ENST00000630972.2@HSPH1	ENST00000630972.2	protein_coding	31161982,31158806,31155514,31154633,31152852,31151609,31150947,31149954,31148374,31147959,31145563,31143792,31141122,31140184,31139000,31138781,31138407,31136625	31162388,31158863,31155654,31154755,31152951,31151742,31151191,31150182,31148480,31148092,31145768,31143923,31141259,31140309,31139107,31138900,31138568,31137524	Gene ID= ENSG00000120694.19 TPM= 5.45 Transcript Type= protein_coding
chr13	31136628	31161927	31136628	31161927	-	ENST00000380405.7@HSPH1	ENST00000380405.7	protein_coding	31161476,31158806,31155514,31154633,31152852,31151609,31150947,31149954,31148374,31147959,31145563,31141122,31140184,31139000,31138781,31138407,31136628	31161927,31158863,31155654,31154755,31152951,31151742,31151191,31150182,31148480,31148092,31145768,31141259,31140309,31139107,31138900,31138568,31137524	Gene ID= ENSG00000120694.19 TPM= 16.25 Transcript Type= protein_coding
chr13	31199936	31332276	31199936	31332276	+	ENST00000343307.4@B3GLCT	ENST00000343307.4	protein_coding	31199936,31215051,31222952,31229185,31247023,31247855,31260946,31269214,31274509,31276702,31284648,31286720,31317566,31323751,31329501	31200154,31215100,31222991,31229294,31247099,31247966,31261082,31269277,31274628,31276771,31284761,31286819,31317685,31323895,31332276	Gene ID= ENSG00000187676.7 TPM= 9.34 Transcript Type= protein_coding
chr13	31199943	31331522	31199943	31331522	+	transcript423.chr13.nnic@B3GLCT	transcript423.chr13.nnic	protein_coding	31199943,31215051,31222952,31229185,31247023,31247855,31260946,31269214,31276702,31284648,31286720,31317566,31323751,31329501	31200154,31215100,31222991,31229294,31247099,31247966,31261082,31269277,31276771,31284761,31286819,31317685,31323895,31331522	Gene ID= ENSG00000187676.7 TPM= 2.34 Transcript Type= NA
chr13	32253907	32296613	32253907	32296613	+	transcript432.chr13.nic@FRY	transcript432.chr13.nic	protein_coding	32253907,32261616,32262314,32265450,32267170,32274842,32276464,32278465,32289633,32294368,32295202	32254394,32261816,32262475,32265616,32267359,32274991,32276562,32278548,32289743,32294570,32296613	Gene ID= ENSG00000073910.20 TPM= 30.94 Transcript Type= NA
chr13	32264672	32296075	32264672	32296075	+	transcript433.chr13.nnic@FRY	transcript433.chr13.nnic	protein_coding	32264672,32265450,32267170,32274842,32276464,32278465,32289633,32294368,32295202	32264739,32265616,32267359,32274991,32276562,32278548,32289743,32294570,32296075	Gene ID= ENSG00000073910.20 TPM= 3.5 Transcript Type= NA
chr13	32254121	32278837	32254121	32278837	+	transcript437.chr13.nic@FRY	transcript437.chr13.nic	protein_coding	32254121,32261616,32262314,32265450,32267170,32274842,32276464,32278465	32254394,32261816,32262475,32265616,32267359,32274991,32276562,32278837	Gene ID= ENSG00000073910.20 TPM= 6.42 Transcript Type= NA
chr13	32315474	32400266	32315474	32400266	+	ENST00000380152.7@BRCA2	ENST00000380152.7	protein_coding	32315474,32316422,32319077,32325076,32326101,32326242,32326499,32329443,32330919,32332272,32336265,32344558,32346827,32354861,32356428,32357742,32362523,32363179,32370402,32370956,32376670,32379317,32379750,32380007,32394689,32396898,32398162	32315667,32316527,32319325,32325184,32326150,32326282,32326613,32329492,32331030,32333387,32341196,32344653,32346896,32355288,32356609,32357929,32362693,32363533,32370557,32371100,32376791,32379515,32379913,32380145,32394933,32397044,32400266	Gene ID= ENSG00000139618.14 TPM= 1.17 Transcript Type= protein_coding
chr13	32400724	32428178	32400724	32428178	-	ENST00000380130.6@N4BP2L1	ENST00000380130.6	protein_coding	32427904,32407645,32407250,32404321,32400724	32428178,32407772,32407338,32404397,32403200	Gene ID= ENSG00000139597.17 TPM= 1.17 Transcript Type= protein_coding
chr13	32432787	32538823	32432787	32538823	-	transcript463.chr13.nnic@N4BP2L2	transcript463.chr13.nnic	protein_coding	32538683,32535769,32527408,32522182,32521373,32517857,32442388,32438652,32436361,32432787	32538823,32537027,32527532,32522270,32521449,32518003,32444126,32438737,32436405,32432972	Gene ID= ENSG00000244754.8 TPM= 3.5 Transcript Type= NA
chr13	32516894	32538826	32516894	32538826	-	transcript465.chr13.nic@N4BP2L2	transcript465.chr13.nic	protein_coding	32538778,32538618,32535769,32527408,32522182,32521373,32516894	32538826,32538684,32537027,32527532,32522270,32521449,32518003	Gene ID= ENSG00000244754.8 TPM= 2.34 Transcript Type= NA
chr13	32516894	32538823	32516894	32538823	-	transcript472.chr13.nnic@N4BP2L2	transcript472.chr13.nnic	protein_coding	32538683,32535769,32527408,32522182,32521373,32516894	32538823,32537027,32527532,32522270,32521449,32518003	Gene ID= ENSG00000244754.8 TPM= 9.34 Transcript Type= NA
chr13	32517614	32538864	32517614	32538864	-	transcript478.chr13.nic@N4BP2L2	transcript478.chr13.nic	protein_coding	32538778,32535769,32527408,32522182,32521373,32517614	32538864,32537027,32527532,32522270,32521449,32518003	Gene ID= ENSG00000244754.8 TPM= 2.72 Transcript Type= NA
chr13	32526819	32538826	32526819	32538826	-	transcript490.chr13.nic@N4BP2L2	transcript490.chr13.nic	protein_coding	32538778,32538618,32535769,32526819	32538826,32538684,32537027,32527532	Gene ID= ENSG00000244754.8 TPM= 2.63 Transcript Type= NA
chr13	32526819	32538814	32526819	32538814	-	transcript491.chr13.nic@N4BP2L2	transcript491.chr13.nic	protein_coding	32538618,32535769,32526819	32538814,32537027,32527532	Gene ID= ENSG00000244754.8 TPM= 10.8 Transcript Type= NA
chr13	32526819	32538823	32526819	32538823	-	transcript492.chr13.nnic@N4BP2L2	transcript492.chr13.nnic	protein_coding	32538683,32535769,32526819	32538823,32537027,32527532	Gene ID= ENSG00000244754.8 TPM= 8.47 Transcript Type= NA
chr13	32526819	32538864	32526819	32538864	-	transcript493.chr13.nic@N4BP2L2	transcript493.chr13.nic	protein_coding	32538778,32535769,32526819	32538864,32537027,32527532	Gene ID= ENSG00000244754.8 TPM= 2.63 Transcript Type= NA
chr13	32532584	32538814	32532584	32538814	-	transcript496.chr13.nic@N4BP2L2	transcript496.chr13.nic	protein_coding	32538618,32532584	32538814,32537027	Gene ID= ENSG00000244754.8 TPM= 2.34 Transcript Type= NA
chr13	32532584	32538823	32532584	32538823	-	transcript497.chr13.nnic@N4BP2L2	transcript497.chr13.nnic	protein_coding	32538683,32532584	32538823,32537027	Gene ID= ENSG00000244754.8 TPM= 3.5 Transcript Type= NA
chr13	32533516	32538814	32533516	32538814	-	transcript498.chr13.nic@N4BP2L2	transcript498.chr13.nic	protein_coding	32538618,32533516	32538814,32537027	Gene ID= ENSG00000244754.8 TPM= 8.17 Transcript Type= NA
chr13	32533516	32538823	32533516	32538823	-	transcript499.chr13.nnic@N4BP2L2	transcript499.chr13.nnic	protein_coding	32538683,32533516	32538823,32537027	Gene ID= ENSG00000244754.8 TPM= 11.68 Transcript Type= NA
chr13	32528698	32530905	32528698	32530905	+	transcript501.chr13.nnic@NA	transcript501.chr13.nnic	NA	32528698	32530905	Gene ID= novel_gene_chr13_502 TPM= 3.5 Transcript Type= NA
chr13	32586427	32778019	32586427	32778019	+	ENST00000315596.14@PDS5B	ENST00000315596.14	protein_coding	32586427,32648754,32651804,32658239,32658434,32659154,32667764,32673216,32675844,32678835,32683878,32687134,32688456,32694223,32696854,32699730,32701323,32706934,32709946,32732101,32735172,32741080,32742591,32745977,32753332,32755842,32758087,32758534,32759628,32760575,32764489,32770121,32770654,32773189,32775017	32586593,32648880,32652007,32658325,32658531,32659280,32667844,32673356,32675959,32678929,32684023,32687285,32688569,32694304,32696902,32699869,32701438,32707039,32710106,32732224,32735330,32741148,32742727,32746100,32753536,32755956,32758219,32758653,32759690,32760720,32764594,32770560,32770761,32773324,32778019	Gene ID= ENSG00000083642.18 TPM= 3.5 Transcript Type= protein_coding
chr13	32775099	32781851	32775099	32781851	-	transcript505.chr13.nnic@NA	transcript505.chr13.nnic	NA	32775099	32781851	Gene ID= novel_gene_chr13_506 TPM= 8.17 Transcript Type= NA
chr13	33016433	33066145	33016433	33066145	+	ENST00000380099.3@KL	ENST00000380099.3	protein_coding	33016433,33053767,33055047,33060679,33063849	33017259,33054277,33055315,33061780,33066145	Gene ID= ENSG00000133116.7 TPM= 12.84 Transcript Type= protein_coding
chr13	33103135	33285755	33103135	33285755	-	ENST00000336934.9@STARD13	ENST00000336934.9	protein_coding	33285470,33167551,33165337,33142310,33128929,33127373,33126081,33118065,33112721,33111778,33110686,33109873,33106758,33103135	33285755,33167622,33165418,33142373,33130289,33127546,33126240,33118263,33112931,33111892,33110907,33110090,33106934,33105710	Gene ID= ENSG00000133121.20 TPM= 21.4 Transcript Type= protein_coding
chr13	33103170	33350735	33103170	33350735	-	transcript516.chr13.nic@STARD13	transcript516.chr13.nic	protein_coding	33350290,33167551,33165337,33142310,33128929,33127373,33126081,33118065,33112721,33111778,33110686,33109873,33106758,33103170	33350735,33167622,33165418,33142373,33130289,33127546,33126240,33118263,33112931,33111892,33110907,33110090,33106934,33105710	Gene ID= ENSG00000133121.20 TPM= 4.47 Transcript Type= NA
chr13	33103170	33206006	33103170	33206006	-	ENST00000399365.7@STARD13	ENST00000399365.7	protein_coding	33205819,33167551,33165337,33142310,33128929,33127373,33126081,33118065,33112721,33111778,33110686,33109873,33106758,33103170	33206006,33167622,33165418,33142373,33130289,33127546,33126240,33118263,33112931,33111892,33110907,33110090,33106934,33105710	Gene ID= ENSG00000133121.20 TPM= 2.14 Transcript Type= protein_coding
chr13	33346808	33350688	33346808	33350688	-	transcript530.chr13.nnic@NA	transcript530.chr13.nnic	NA	33346808	33350688	Gene ID= novel_gene_chr13_531 TPM= 2.34 Transcript Type= NA
chr13	33818049	33837496	33818049	33837496	+	ENST00000380071.7@RFC3	ENST00000380071.7	protein_coding	33818049,33821132,33823917,33825789,33829836,33830719,33831256,33835148,33836104	33818265,33821269,33823984,33825886,33830017,33830855,33831354,33835217,33837496	Gene ID= ENSG00000133119.12 TPM= 4.67 Transcript Type= protein_coding
chr13	33846190	33850825	33846190	33850825	+	ENST00000621575.1@AL161891.1	ENST00000621575.1	sense_intronic	33846190	33850825	Gene ID= ENSG00000276672.1 TPM= 1.17 Transcript Type= sense_intronic
chr13	34942287	35672735	34942287	35672735	+	ENST00000400445.7@NBEA	ENST00000400445.7	protein_coding	34942287,35040933,35044947,35045306,35048563,35050269,35056010,35058717,35069908,35070719,35098297,35109290,35110810,35117414,35118228,35118377,35123482,35142269,35155774,35156083,35157078,35159016,35161750,35164356,35168987,35171272,35173464,35176996,35182360,35183976,35195864,35208700,35211053,35232492,35290389,35309528,35349108,35352157,35432269,35452092,35472400,35550477,35550930,35554987,35566905,35583898,35593328,35606426,35628081,35646259,35649655,35651805,35654855,35655579,35665085,35667374,35668368,35670901	34943114,35041164,35045047,35045401,35048684,35050395,35056129,35058863,35070105,35070852,35098405,35109442,35110978,35117493,35118290,35118474,35123574,35142377,35155855,35156206,35157270,35160032,35161967,35164509,35168995,35171452,35173594,35177103,35182528,35184071,35196302,35208854,35211179,35232619,35290450,35309592,35349216,35352323,35432393,35452235,35472536,35550594,35551032,35555102,35567017,35584038,35593447,35606578,35628248,35646348,35649847,35651876,35655010,35655749,35665186,35667570,35668519,35672735	Gene ID= ENSG00000172915.18 TPM= 1.17 Transcript Type= protein_coding
chr13	36301640	36346797	36301640	36346797	-	ENST00000451493.5@SPART	ENST00000451493.5	protein_coding	36346582,36335021,36331399,36329362,36326575,36314227,36312319,36312145,36301640	36346797,36335832,36331596,36329517,36326698,36314421,36312477,36312235,36304632	Gene ID= ENSG00000133104.12 TPM= 1.17 Transcript Type= protein_coding
chr13	36301638	36346283	36301638	36346283	-	ENST00000438666.6@SPART	ENST00000438666.6	protein_coding	36346225,36335021,36331399,36329362,36326575,36314227,36312319,36312145,36301638	36346283,36335832,36331596,36329517,36326698,36314421,36312477,36312235,36304632	Gene ID= ENSG00000133104.12 TPM= 1.17 Transcript Type= protein_coding
chr13	36673912	36697839	36673912	36697839	+	ENST00000315190.3@SERTM1	ENST00000315190.3	protein_coding	36673912,36694906	36674184,36697839	Gene ID= ENSG00000180440.3 TPM= 4.67 Transcript Type= protein_coding
chr13	36819224	36829104	36819224	36829104	+	ENST00000255476.2@RFXAP	ENST00000255476.2	protein_coding	36819224,36825428,36827643	36819957,36825535,36829104	Gene ID= ENSG00000133111.3 TPM= 21.02 Transcript Type= protein_coding
chr13	36844831	36920272	36844831	36920272	-	ENST00000379826.4@SMAD9	ENST00000379826.4	protein_coding	36920116,36879278,36872658,36867273,36865537,36853419,36844831	36920272,36879875,36872915,36867383,36865758,36853675,36848819	Gene ID= ENSG00000120693.13 TPM= 18.68 Transcript Type= protein_coding
chr13	36844831	36920238	36844831	36920238	-	ENST00000350148.9@SMAD9	ENST00000350148.9	protein_coding	36920116,36879278,36872658,36865537,36853419,36844831	36920238,36879875,36872915,36865758,36853675,36848819	Gene ID= ENSG00000120693.13 TPM= 14.01 Transcript Type= protein_coding
chr13	36949830	36999367	36949830	36999367	-	ENST00000239891.3@ALG5	ENST00000239891.3	protein_coding	36999235,36995425,36994989,36993604,36989484,36985627,36971977,36965575,36952514,36949830	36999367,36995596,36995035,36993672,36989576,36985740,36972036,36965726,36952599,36950057	Gene ID= ENSG00000120697.8 TPM= 75.89 Transcript Type= protein_coding
chr13	36949849	36999376	36949849	36999376	-	transcript590.chr13.nic@ALG5	transcript590.chr13.nic	protein_coding	36999235,36995425,36993604,36989484,36985627,36971977,36965575,36952514,36949849	36999376,36995596,36993672,36989576,36985740,36972036,36965726,36952599,36950057	Gene ID= ENSG00000120697.8 TPM= 2.34 Transcript Type= NA
chr13	36949849	36999376	36949849	36999376	-	transcript591.chr13.nnic@ALG5	transcript591.chr13.nnic	protein_coding	36999235,36995425,36994989,36993604,36989484,36971977,36965575,36952514,36949849	36999376,36995596,36995035,36993672,36989576,36972036,36965726,36952599,36950057	Gene ID= ENSG00000120697.8 TPM= 3.5 Transcript Type= NA
chr13	37000541	37009401	37000541	37009401	+	ENST00000389704.3@EXOSC8	ENST00000389704.3	protein_coding	37000541,37002273,37002488,37002934,37004516,37005920,37006115,37006975,37008057,37008729,37009184	37000822,37002309,37002551,37003007,37004561,37006025,37006160,37007071,37008177,37008835,37009401	Gene ID= ENSG00000120699.12 TPM= 14.01 Transcript Type= protein_coding
chr13	37000776	37009390	37000776	37009390	+	transcript621.chr13.nic@EXOSC8	transcript621.chr13.nic	protein_coding	37000776,37002273,37002488,37002934,37004516,37005920,37006115,37006975,37008057,37008729	37000822,37002309,37002551,37003007,37004561,37006025,37006160,37007071,37008177,37009390	Gene ID= ENSG00000120699.12 TPM= 4.67 Transcript Type= NA
chr13	37000776	37009614	37000776	37009614	+	transcript624.chr13.nic@EXOSC8	transcript624.chr13.nic	protein_coding	37000776,37002273,37002488,37002934,37005920,37006115,37006975,37008057,37008729,37009184	37000822,37002309,37002551,37004561,37006025,37006160,37007071,37008177,37008835,37009614	Gene ID= ENSG00000120699.12 TPM= 2.34 Transcript Type= NA
chr13	37000787	37009401	37000787	37009401	+	ENST00000490537.6@EXOSC8	ENST00000490537.6	protein_coding	37000787,37002273,37002488,37002934,37005957,37006115,37006975,37008057,37008729,37009184	37000822,37002309,37002551,37004561,37006025,37006160,37007071,37008177,37008835,37009401	Gene ID= ENSG00000120699.12 TPM= 4.67 Transcript Type= retained_intron
chr13	37009316	37059653	37009316	37059653	-	transcript600.chr13.nic@SUPT20H	transcript600.chr13.nic	protein_coding	37059559,37051488,37048564,37047878,37047535,37045247,37044078,37040576,37040405,37033449,37031739,37031567,37029765,37028148,37026790,37026204,37025320,37024340,37024035,37022011,37021448,37019342,37017245,37012192,37009316	37059653,37051583,37048599,37047936,37047601,37045373,37044181,37040692,37040458,37033588,37031895,37031623,37029836,37028305,37026816,37026236,37025437,37024442,37024193,37022080,37021602,37019397,37017328,37012297,37009809	Gene ID= ENSG00000102710.19 TPM= 2.34 Transcript Type= NA
chr13	37009316	37059713	37009316	37059713	-	ENST00000360252.8@SUPT20H	ENST00000360252.8	protein_coding	37059559,37051488,37048564,37047878,37047535,37045247,37044078,37040576,37040405,37033449,37031739,37031567,37029765,37028148,37026790,37026204,37025320,37024340,37024035,37022011,37021448,37019342,37017245,37012192,37009316	37059713,37051583,37048599,37047936,37047601,37045376,37044181,37040692,37040458,37033588,37031895,37031623,37029836,37028305,37026816,37026236,37025437,37024442,37024193,37022080,37021602,37019397,37017364,37012297,37009809	Gene ID= ENSG00000102710.19 TPM= 12.84 Transcript Type= protein_coding
chr13	37009494	37059707	37009494	37059707	-	transcript606.chr13.nic@SUPT20H	transcript606.chr13.nic	protein_coding	37059559,37051488,37048564,37047878,37047535,37045247,37044078,37040576,37040405,37033449,37031739,37031567,37029765,37028148,37026790,37026204,37025320,37024340,37024035,37022011,37021448,37019342,37017245,37012192,37009494	37059707,37051583,37048599,37047936,37047601,37045373,37044181,37040692,37040458,37033588,37031895,37031623,37029836,37028305,37026816,37026236,37025437,37024442,37024193,37023044,37021602,37019397,37017364,37012297,37009809	Gene ID= ENSG00000102710.19 TPM= 4.09 Transcript Type= NA
chr13	37009316	37059656	37009316	37059656	-	transcript608.chr13.nic@SUPT20H	transcript608.chr13.nic	protein_coding	37059559,37051488,37047878,37047535,37045247,37044078,37040576,37040405,37033449,37031739,37031567,37029765,37028148,37026790,37026204,37025320,37024340,37024035,37022011,37021448,37019342,37017245,37012192,37009316	37059656,37051583,37047936,37047601,37045373,37044181,37040692,37040458,37033588,37031895,37031623,37029836,37028305,37026816,37026236,37025437,37024442,37024193,37022080,37021602,37019397,37017328,37012297,37009809	Gene ID= ENSG00000102710.19 TPM= 2.34 Transcript Type= NA
chr13	37009493	37059649	37009493	37059649	-	ENST00000475892.5@SUPT20H	ENST00000475892.5	protein_coding	37059559,37051488,37048564,37047878,37047535,37045247,37044078,37040576,37040405,37033449,37031739,37031567,37029765,37028148,37026790,37026204,37025320,37024340,37024035,37022011,37021448,37019342,37017245,37012192,37009493	37059649,37051583,37048599,37047936,37047601,37045373,37044181,37040692,37040458,37033588,37031895,37031623,37029836,37028305,37026816,37026236,37025437,37024442,37024193,37022317,37021602,37019397,37017364,37012297,37009809	Gene ID= ENSG00000102710.19 TPM= 5.25 Transcript Type= protein_coding
chr13	37562585	37598855	37562585	37598855	-	transcript642.chr13.nic@POSTN	transcript642.chr13.nic	protein_coding	37598608,37597184,37592100,37590372,37587822,37586782,37586139,37584716,37583969,37582366,37580561,37579861,37579229,37579019,37578844,37577753,37570580,37569744,37564519,37562585	37598855,37597282,37592164,37590529,37587986,37586928,37586280,37584928,37584103,37582514,37580697,37579991,37579359,37579121,37578911,37577798,37570669,37569821,37564560,37563370	Gene ID= ENSG00000133110.14 TPM= 43.43 Transcript Type= NA
chr13	37562585	37598768	37562585	37598768	-	transcript645.chr13.nic@POSTN	transcript645.chr13.nic	protein_coding	37598608,37597184,37592100,37590372,37587822,37586782,37586139,37584716,37583969,37582366,37580561,37579861,37579229,37579019,37578844,37577753,37569744,37564519,37562585	37598768,37597282,37592164,37590529,37587986,37586928,37586280,37584928,37584103,37582514,37580697,37579991,37579359,37579121,37578911,37577798,37569821,37564560,37563370	Gene ID= ENSG00000133110.14 TPM= 15.41 Transcript Type= NA
chr13	37562583	37598844	37562583	37598844	-	ENST00000541179.5@POSTN	ENST00000541179.5	protein_coding	37598608,37597184,37592100,37590372,37587822,37586782,37586139,37584716,37583969,37582366,37580561,37579861,37579229,37579019,37578844,37577753,37571369,37570580,37569744,37564519,37562583	37598844,37597282,37592164,37590529,37587986,37586928,37586280,37584928,37584103,37582514,37580697,37579991,37579359,37579121,37578911,37577798,37571458,37570669,37569821,37564560,37563370	Gene ID= ENSG00000133110.14 TPM= 24.75 Transcript Type= protein_coding
chr13	37562585	37598761	37562585	37598761	-	ENST00000379749.8@POSTN	ENST00000379749.8	protein_coding	37598608,37597184,37592100,37590372,37587822,37586782,37586139,37584716,37583969,37582366,37580561,37579861,37579229,37579019,37578844,37577753,37574572,37571369,37570580,37569744,37564519,37562585	37598761,37597282,37592164,37590529,37587986,37586928,37586280,37584928,37584103,37582514,37580697,37579991,37579359,37579121,37578911,37577798,37574652,37571458,37570669,37569821,37564560,37563370	Gene ID= ENSG00000133110.14 TPM= 7.01 Transcript Type= protein_coding
chr13	37562591	37598750	37562591	37598750	-	ENST00000379743.8@POSTN	ENST00000379743.8	protein_coding	37598608,37597184,37592100,37590372,37587822,37586782,37586139,37584716,37583969,37582366,37580561,37579861,37579229,37579019,37578844,37577753,37571369,37570580,37569744,37569300,37564519,37562591	37598750,37597282,37592164,37590529,37587986,37586928,37586280,37584928,37584103,37582514,37580697,37579991,37579359,37579121,37578911,37577798,37571458,37570669,37569821,37569383,37564560,37563370	Gene ID= ENSG00000133110.14 TPM= 16.35 Transcript Type= protein_coding
chr13	37562634	37598758	37562634	37598758	-	ENST00000379742.4@POSTN	ENST00000379742.4	protein_coding	37598608,37597184,37592100,37590372,37587822,37586782,37586139,37584716,37583969,37582366,37580561,37579861,37579229,37579019,37578844,37577753,37570580,37569744,37569300,37564519,37562634	37598758,37597282,37592164,37590529,37587986,37586928,37586280,37584928,37584103,37582514,37580697,37579991,37579359,37579121,37578911,37577798,37570669,37569821,37569383,37564560,37563370	Gene ID= ENSG00000133110.14 TPM= 17.51 Transcript Type= protein_coding
chr13	37636636	37870425	37636636	37870425	-	ENST00000379705.7@TRPC4	ENST00000379705.7	protein_coding	37869595,37782956,37745937,37691999,37674228,37663416,37655088,37651265,37639258,37639040,37636636	37870425,37783360,37746455,37692335,37674367,37663729,37655283,37651459,37639299,37639129,37637625	Gene ID= ENSG00000133107.14 TPM= 2.34 Transcript Type= protein_coding
chr13	38043107	38047599	38043107	38047599	+	transcript672.chr13.nnic@NA	transcript672.chr13.nnic	NA	38043107	38047599	Gene ID= novel_gene_chr13_673 TPM= 5.84 Transcript Type= NA
chr13	38349810	38363003	38349810	38363003	+	transcript658.chr13.nnic@UFM1	transcript658.chr13.nnic	protein_coding	38349810,38349999,38354239,38358093,38359301,38360041	38349921,38350055,38354296,38358132,38359333,38363003	Gene ID= ENSG00000120686.11 TPM= 11.97 Transcript Type= NA
chr13	38349810	38363003	38349810	38363003	+	transcript667.chr13.nic@UFM1	transcript667.chr13.nic	protein_coding	38349810,38349999,38354239,38358093,38359301	38349921,38350055,38354296,38358132,38363003	Gene ID= ENSG00000120686.11 TPM= 7.3 Transcript Type= NA
chr13	38687129	38887131	38687129	38887131	+	ENST00000280481.8@FREM2	ENST00000280481.8	protein_coding	38687129,38697698,38764304,38769578,38783070,38784557,38846573,38848461,38850038,38850944,38851686,38856126,38857875,38859287,38861431,38864275,38872742,38874482,38876022,38876248,38877117,38878134,38878831,38880284	38692517,38697787,38764450,38769808,38783195,38784808,38846722,38848670,38850235,38851108,38851868,38856256,38858033,38859590,38861562,38864606,38872934,38874586,38876149,38876382,38877243,38878321,38878977,38887131	Gene ID= ENSG00000150893.10 TPM= 3.5 Transcript Type= protein_coding
chr13	39038318	39050109	39038318	39050109	+	ENST00000379600.7@NHLRC3	ENST00000379600.7	protein_coding	39038318,39039136,39039564,39042105,39044090,39047040,39047674	39038723,39039288,39039711,39042305,39044181,39047152,39050109	Gene ID= ENSG00000188811.13 TPM= 12.84 Transcript Type= protein_coding
chr13	39038391	39050109	39038391	39050109	+	ENST00000379599.6@NHLRC3	ENST00000379599.6	protein_coding	39038391,39039136,39039564,39044090,39047040,39047674	39038723,39039288,39039711,39044181,39047152,39050109	Gene ID= ENSG00000188811.13 TPM= 5.84 Transcript Type= protein_coding
chr13	39038324	39040036	39038324	39040036	+	transcript684.chr13.nnic@NA	transcript684.chr13.nnic	NA	39038324	39040036	Gene ID= novel_gene_chr13_685 TPM= 5.84 Transcript Type= NA
chr13	39342892	39603171	39342892	39603171	-	ENST00000379589.3@LHFPL6	ENST00000379589.3	protein_coding	39602883,39600832,39378428,39342892	39603171,39601390,39378526,39344054	Gene ID= ENSG00000183722.7 TPM= 274.38 Transcript Type= protein_coding
chr13	39598288	39603189	39598288	39603189	-	transcript691.chr13.nic@LHFPL6	transcript691.chr13.nic	protein_coding	39602883,39598288	39603189,39601390	Gene ID= ENSG00000183722.7 TPM= 3.5 Transcript Type= NA
chr13	39655677	39752632	39655677	39752632	+	ENST00000455146.7@COG6	ENST00000455146.7	protein_coding	39655677,39659364,39660810,39665096,39677468,39679538,39679975,39682171,39687503,39687708,39689760,39694634,39699501,39719236,39719660,39723333,39724508,39727469,39750946	39655879,39659507,39660881,39665154,39677579,39679620,39680045,39682264,39687631,39687799,39689824,39694725,39699618,39719367,39719827,39723440,39724561,39727548,39752632	Gene ID= ENSG00000133103.16 TPM= 9.34 Transcript Type= protein_coding
chr13	40558916	40666646	40558916	40666646	-	transcript703.chr13.nic@FOXO1	transcript703.chr13.nic	protein_coding	40665583,40558916	40666646,40560860	Gene ID= ENSG00000150907.7 TPM= 9.34 Transcript Type= NA
chr13	40623537	40625671	40623537	40625671	+	transcript705.chr13.nnic@NA	transcript705.chr13.nnic	NA	40623537	40625671	Gene ID= novel_gene_chr13_706 TPM= 3.5 Transcript Type= NA
chr13	40789431	40812454	40789431	40812454	+	transcript713.chr13.nnic@SLC25A15	transcript713.chr13.nnic	protein_coding	40789431,40793158,40799057,40805118,40807294,40808438,40809543,40811452	40789663,40793281,40799315,40805255,40807463,40808596,40810194,40812454	Gene ID= ENSG00000102743.14 TPM= 4.67 Transcript Type= NA
chr13	40895326	40897965	40895326	40897965	-	transcript719.chr13.nnic@NA	transcript719.chr13.nnic	NA	40895326	40897965	Gene ID= novel_gene_chr13_720 TPM= 2.34 Transcript Type= NA
chr13	40932034	41019314	40932034	41019314	-	ENST00000239882.6@ELF1	ENST00000239882.6	protein_coding	41019228,40981983,40958836,40951329,40949806,40943842,40942952,40940921,40932034	41019314,40982282,40959016,40951436,40949973,40943925,40943144,40941370,40934028	Gene ID= ENSG00000120690.15 TPM= 9.92 Transcript Type= protein_coding
chr13	40932034	41061446	40932034	41061446	-	transcript729.chr13.nic@ELF1	transcript729.chr13.nic	protein_coding	41060838,40981983,40958836,40951329,40949806,40943842,40942952,40940921,40932034	41061446,40982282,40959016,40951436,40949973,40943925,40943144,40941370,40934028	Gene ID= ENSG00000120690.15 TPM= 46.12 Transcript Type= NA
chr13	41060490	41068631	41060490	41068631	+	transcript733.chr13.nic@WBP4	transcript733.chr13.nic	protein_coding	41060490,41062644,41065016,41065164,41068561	41061675,41062716,41065078,41065287,41068631	Gene ID= ENSG00000120688.8 TPM= 7.01 Transcript Type= NA
chr13	41216369	41263577	41216369	41263577	-	ENST00000379480.8@MTRF1	ENST00000379480.8	protein_coding	41263485,41260493,41254529,41252949,41252645,41240261,41233890,41226432,41223256,41216369	41263577,41260915,41254620,41253030,41252752,41240433,41234007,41226568,41223354,41217228	Gene ID= ENSG00000120662.15 TPM= 2.34 Transcript Type= protein_coding
chr13	41311205	41377030	41311205	41377030	+	ENST00000379406.7@NAA16	ENST00000379406.7	protein_coding	41311205,41316846,41318806,41320667,41323056,41325698,41328724,41331274,41336650,41355144,41358304,41358810,41362031,41367439,41369090,41372203,41372732,41373637,41374742,41375405	41311582,41316930,41318910,41320824,41323190,41325851,41328843,41331369,41336756,41355216,41358473,41358962,41362159,41367652,41369283,41372311,41372830,41373780,41374839,41377030	Gene ID= ENSG00000172766.18 TPM= 8.17 Transcript Type= protein_coding
chr13	41311248	41333522	41311248	41333522	+	transcript747.chr13.nic@NAA16	transcript747.chr13.nic	protein_coding	41311248,41316846,41318806,41320667,41323056,41325698,41328724,41331274	41311582,41316930,41318910,41320824,41323190,41325851,41328843,41333522	Gene ID= ENSG00000172766.18 TPM= 3.5 Transcript Type= NA
chr13	41457559	41470882	41457559	41470882	+	ENST00000379359.3@RGCC	ENST00000379359.3	protein_coding	41457559,41458285,41466823,41468776,41470478	41457756,41458470,41466930,41468838,41470882	Gene ID= ENSG00000102760.12 TPM= 911.31 Transcript Type= protein_coding
chr13	41719337	41961120	41719337	41961120	-	ENST00000281496.6@VWA8	ENST00000281496.6	protein_coding	41960853,41949936,41912038,41907586,41891420,41887197,41886781,41885920,41883387,41868346,41865902,41865736,41833371,41830529,41819218,41816698,41811225,41787437,41783795,41777985,41761128,41732080,41729542,41727194,41721370,41719337	41961120,41950013,41912168,41907696,41891587,41887361,41886830,41886028,41883491,41868477,41866036,41865813,41833531,41830642,41819386,41816775,41811340,41787543,41783901,41778056,41761204,41732155,41729677,41727313,41721575,41719742	Gene ID= ENSG00000102763.17 TPM= 1.17 Transcript Type= protein_coding
chr13	41719337	41961116	41719337	41961116	-	transcript759.chr13.nnic@VWA8	transcript759.chr13.nnic	protein_coding	41960853,41949936,41912038,41907586,41891420,41887197,41886781,41885920,41883387,41868346,41865902,41865736,41833371,41830529,41819218,41816698,41811225,41787437,41777985,41761128,41732080,41729542,41727194,41721370,41719337	41961116,41950013,41912168,41907696,41891587,41887361,41886830,41886028,41883491,41868477,41866036,41865813,41833531,41830642,41819386,41816775,41811340,41787543,41778056,41761204,41732155,41729677,41727313,41721575,41719742	Gene ID= ENSG00000102763.17 TPM= 2.34 Transcript Type= NA
chr13	41566837	41961084	41566837	41961084	-	ENST00000379310.7@VWA8	ENST00000379310.7	protein_coding	41960853,41949936,41912038,41907586,41891420,41887197,41886781,41885920,41883387,41868346,41865902,41865736,41833371,41830529,41819218,41816698,41811225,41787437,41783795,41777985,41761128,41732080,41729542,41727194,41721370,41719591,41703303,41701392,41699071,41692862,41691874,41691320,41690166,41689354,41685047,41675215,41670946,41614976,41611576,41605168,41590640,41587512,41575740,41570468,41566837	41961084,41950013,41912168,41907696,41891587,41887361,41886830,41886028,41883491,41868477,41866036,41865813,41833531,41830642,41819386,41816775,41811340,41787543,41783901,41778056,41761204,41732155,41729677,41727313,41721575,41719742,41703411,41701530,41699270,41692972,41691938,41691445,41690275,41689508,41685242,41675296,41671147,41615084,41611732,41605276,41590765,41587670,41575838,41570706,41568305	Gene ID= ENSG00000102763.17 TPM= 17.51 Transcript Type= protein_coding
chr13	42040557	42066723	42040557	42066723	+	transcript767.chr13.nnic@DGKH	transcript767.chr13.nnic	protein_coding	42040557,42048762,42066091	42040942,42048965,42066723	Gene ID= ENSG00000102780.16 TPM= 4.67 Transcript Type= NA
chr13	42050321	42051362	42050321	42051362	-	transcript770.chr13.nnic@NA	transcript770.chr13.nnic	NA	42050321	42051362	Gene ID= novel_gene_chr13_771 TPM= 2.34 Transcript Type= NA
chr13	42887986	42992262	42887986	42992262	-	transcript777.chr13.nic@EPSTI1	transcript777.chr13.nic	protein_coding	42991978,42970612,42969094,42964066,42963255,42953948,42926336,42917541,42900310,42895009,42889211,42887986	42992262,42970670,42969177,42964139,42963338,42954021,42926429,42917624,42900383,42895108,42889242,42888502	Gene ID= ENSG00000133106.14 TPM= 2.34 Transcript Type= NA
chr13	42886388	42992249	42886388	42992249	-	ENST00000313624.11@EPSTI1	ENST00000313624.11	protein_coding	42991978,42970612,42969094,42964066,42963255,42953948,42926336,42917541,42900310,42895009,42886388	42992249,42970670,42969177,42964139,42963338,42954021,42926429,42917624,42900383,42895108,42888502	Gene ID= ENSG00000133106.14 TPM= 3.5 Transcript Type= protein_coding
chr13	42972283	42974672	42972283	42974672	+	transcript787.chr13.nnic@NA	transcript787.chr13.nnic	NA	42972283	42974672	Gene ID= novel_gene_chr13_788 TPM= 4.67 Transcript Type= NA
chr13	43023203	43114224	43023203	43114224	+	ENST00000379221.3@DNAJC15	ENST00000379221.3	protein_coding	43023203,43065686,43068930,43078612,43085768,43107178	43023734,43065737,43069003,43078688,43085838,43114224	Gene ID= ENSG00000120675.5 TPM= 36.2 Transcript Type= protein_coding
chr13	43025008	43028640	43025008	43028640	-	transcript794.chr13.nnic@NA	transcript794.chr13.nnic	NA	43025008	43028640	Gene ID= novel_gene_chr13_795 TPM= 3.5 Transcript Type= NA
chr13	43879284	43893931	43879284	43893931	+	ENST00000441843.5@LACC1	ENST00000441843.5	protein_coding	43879284,43880952,43882185,43883771,43888757,43890114,43891449	43879734,43881547,43882363,43883936,43888982,43890274,43893931	Gene ID= ENSG00000179630.10 TPM= 11.09 Transcript Type= protein_coding
chr13	43879833	43893932	43879833	43893932	+	ENST00000325686.6@LACC1	ENST00000325686.6	protein_coding	43879833,43880952,43882185,43883771,43888757,43890114,43891449	43880119,43881547,43882363,43883936,43888982,43890274,43893932	Gene ID= ENSG00000179630.10 TPM= 6.42 Transcript Type= protein_coding
chr13	44373598	44397710	44373598	44397710	+	transcript810.chr13.nic@SERP2	transcript810.chr13.nic	protein_coding	44373598,44373999,44379641,44390357,44397272	44373757,44374109,44379713,44390578,44397710	Gene ID= ENSG00000151778.10 TPM= 2.34 Transcript Type= NA
chr13	44373882	44397710	44373882	44397710	+	ENST00000493476.1@SERP2	ENST00000493476.1	protein_coding	44373882,44379641,44390357,44397272	44374109,44379713,44390578,44397710	Gene ID= ENSG00000151778.10 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr13	44432143	44437254	44432143	44437254	-	ENST00000622051.1@TSC22D1	ENST00000622051.1	protein_coding	44437176,44436044,44432143	44437254,44436095,44434883	Gene ID= ENSG00000102804.14 TPM= 2.34 Transcript Type= protein_coding
chr13	44432143	44474301	44432143	44474301	-	ENST00000611198.4@TSC22D1	ENST00000611198.4	protein_coding	44474218,44436044,44432143	44474301,44436095,44434883	Gene ID= ENSG00000102804.14 TPM= 1.17 Transcript Type= protein_coding
chr13	44939249	44989483	44939249	44989483	-	ENST00000379161.4@NUFIP1	ENST00000379161.4	protein_coding	44989025,44982072,44980722,44979890,44979190,44965844,44959381,44949722,44943442,44939249	44989483,44982154,44980820,44979952,44979266,44965936,44959574,44949838,44943674,44941322	Gene ID= ENSG00000083635.7 TPM= 3.5 Transcript Type= protein_coding
chr13	44989536	45030278	44989536	45030278	+	transcript841.chr13.nic@GPALPP1	transcript841.chr13.nic	protein_coding	44989536,45004305,45006202,45008795,45014952,45015432,45020330,45027785,45029239	44989742,45004437,45006303,45008879,45015083,45015596,45020428,45028003,45030278	Gene ID= ENSG00000133114.17 TPM= 2.34 Transcript Type= NA
chr13	44989552	45028270	44989552	45028270	+	ENST00000379151.8@GPALPP1	ENST00000379151.8	protein_coding	44989552,45004305,45006202,45008795,45014952,45015432,45020330,45027785	44989742,45004437,45006303,45008879,45015083,45015596,45020428,45028270	Gene ID= ENSG00000133114.17 TPM= 3.5 Transcript Type= protein_coding
chr13	45120515	45284909	45120515	45284909	+	ENST00000340473.7@GTF2F2	ENST00000340473.7	protein_coding	45120515,45136733,45149770,45151687,45207424,45252871,45267233,45283442	45120721,45136806,45149788,45151831,45207505,45252970,45267376,45284909	Gene ID= ENSG00000188342.11 TPM= 7.01 Transcript Type= protein_coding
chr13	45333471	45341370	45333471	45341370	-	ENST00000530705.5@TPT1	ENST00000530705.5	protein_coding	45341042,45340712,45339994,45339497,45338660,45333471	45341370,45340785,45340184,45339602,45338776,45337388	Gene ID= ENSG00000133112.16 TPM= 278.86 Transcript Type= protein_coding
chr13	45336873	45341212	45336873	45341212	-	ENST00000379056.5@TPT1	ENST00000379056.5	protein_coding	45341042,45339994,45339497,45338660,45336873	45341212,45340184,45339602,45338776,45337388	Gene ID= ENSG00000133112.16 TPM= 11.68 Transcript Type= protein_coding
chr13	45337198	45341122	45337198	45341122	-	ENST00000379060.8@TPT1	ENST00000379060.8	protein_coding	45341038,45340712,45339994,45339497,45338660,45337198	45341122,45340785,45340184,45339602,45338776,45337388	Gene ID= ENSG00000133112.16 TPM= 113.26 Transcript Type= protein_coding
chr13	45387585	45391475	45387585	45391475	+	ENST00000330825.3@TPT1-AS1	ENST00000330825.3	processed_transcript	45387585,45390714,45391032	45389820,45390902,45391475	Gene ID= ENSG00000170919.15 TPM= 1.17 Transcript Type= retained_intron
chr13	45364762	45365894	45364762	45365894	-	transcript895.chr13.nnic@NA	transcript895.chr13.nnic	NA	45364762	45365894	Gene ID= novel_gene_chr13_896 TPM= 2.34 Transcript Type= NA
chr13	45393316	45418384	45393316	45418384	-	transcript898.chr13.nic@SLC25A30	transcript898.chr13.nic	protein_coding	45418300,45411362,45405883,45404327,45402275,45401083,45398940,45397258,45393316	45418384,45411480,45405977,45404412,45402370,45401207,45399078,45397338,45396015	Gene ID= ENSG00000174032.16 TPM= 4.67 Transcript Type= NA
chr13	45464920	45536630	45464920	45536630	+	transcript905.chr13.nnic@COG3	transcript905.chr13.nnic	protein_coding	45464920,45476201,45479005,45480156,45481230,45482381,45483230,45486495,45490915,45491412,45492159,45493347,45496152,45503244,45509692,45511765,45516143,45518762,45518960,45524976,45529791,45530682,45534702	45465210,45476347,45479066,45480290,45481304,45482473,45483355,45486575,45490958,45491538,45492250,45493486,45496312,45503349,45509816,45511854,45516263,45518850,45519094,45525051,45529918,45530780,45536630	Gene ID= ENSG00000136152.14 TPM= 2.34 Transcript Type= NA
chr13	45464920	45536630	45464920	45536630	+	transcript906.chr13.nnic@COG3	transcript906.chr13.nnic	protein_coding	45464920,45476201,45479005,45480250,45481230,45482381,45483230,45486495,45490915,45491412,45492159,45493347,45496152,45503244,45509692,45511765,45516143,45518762,45518960,45524976,45529791,45530682,45534702	45465210,45476347,45479066,45480290,45481304,45482473,45483355,45486575,45490958,45491538,45492250,45493486,45496312,45503349,45509816,45511854,45516263,45518850,45519094,45525051,45529918,45530780,45536630	Gene ID= ENSG00000136152.14 TPM= 2.34 Transcript Type= NA
chr13	45465064	45466624	45465064	45466624	+	ENST00000476702.1@COG3	ENST00000476702.1	protein_coding	45465064,45466517	45465210,45466624	Gene ID= ENSG00000136152.14 TPM= 1.17 Transcript Type= non_stop_decay
chr13	45464925	45536630	45464925	45536630	+	ENST00000349995.9@COG3	ENST00000349995.9	protein_coding	45464925,45476201,45479005,45480125,45481230,45482381,45483230,45486495,45490915,45491412,45492159,45493347,45496152,45503244,45509692,45511765,45516143,45518762,45518960,45524976,45529791,45530682,45534702	45465210,45476347,45479066,45480290,45481304,45482473,45483355,45486575,45490958,45491538,45492250,45493486,45496312,45503349,45509816,45511854,45516263,45518850,45519094,45525051,45529918,45530780,45536630	Gene ID= ENSG00000136152.14 TPM= 16.35 Transcript Type= protein_coding
chr13	45962176	46052759	45962176	46052759	-	ENST00000282007.7@ZC3H13	ENST00000282007.7	protein_coding	46052698,46045391,46044955,46042164,46020449,46011415,46010348,46003139,45988787,45985297,45979813,45975283,45970362,45968748,45967504,45965280,45962176	46052759,46045516,46045064,46042275,46020557,46011554,46010505,46003336,45989097,45985761,45980004,45975838,45970465,45969971,45968028,45965432,45964042	Gene ID= ENSG00000123200.16 TPM= 2.34 Transcript Type= protein_coding
chr13	45954465	46052746	45954465	46052746	-	ENST00000242848.8@ZC3H13	ENST00000242848.8	protein_coding	46052404,46045391,46044955,46042164,46020449,46011415,46010348,46003139,45988787,45985297,45979813,45975283,45970362,45968748,45967504,45965280,45963842,45959483,45954465	46052746,46045513,46045064,46042275,46020557,46011554,46010505,46003336,45989097,45985761,45980004,45975838,45970465,45969971,45968028,45965429,45964042,45959646,45957297	Gene ID= ENSG00000123200.16 TPM= 7.01 Transcript Type= protein_coding
chr13	46036190	46046516	46036190	46046516	+	transcript918.chr13.nnic@NA	transcript918.chr13.nnic	NA	46036190	46046516	Gene ID= novel_gene_chr13_919 TPM= 3.5 Transcript Type= NA
chr13	46049689	46052007	46049689	46052007	+	transcript916.chr13.nnic@NA	transcript916.chr13.nnic	NA	46049689	46052007	Gene ID= novel_gene_chr13_917 TPM= 18.68 Transcript Type= NA
chr13	46053186	46105073	46053186	46105073	-	transcript922.chr13.nnic@CPB2	transcript922.chr13.nnic	protein_coding	46104936,46087745,46084219,46082441,46078800,46073873,46067307,46064648,46058179,46055762,46053186	46105073,46087820,46084343,46082597,46078901,46073977,46067417,46064741,46058381,46055849,46053798	Gene ID= ENSG00000080618.13 TPM= 3.79 Transcript Type= NA
chr13	46053186	46105073	46053186	46105073	-	transcript923.chr13.nnic@CPB2	transcript923.chr13.nnic	protein_coding	46104936,46087745,46084219,46078800,46073873,46067307,46064648,46058179,46055762,46053186	46105073,46087820,46084343,46078901,46073977,46067417,46064741,46058381,46055849,46053798	Gene ID= ENSG00000080618.13 TPM= 3.79 Transcript Type= NA
chr13	46053187	46105076	46053187	46105076	-	ENST00000439329.4@CPB2	ENST00000439329.4	protein_coding	46104936,46087745,46084219,46082441,46078800,46073873,46064648,46058179,46055762,46053187	46105076,46087820,46084343,46082549,46078901,46073977,46064741,46058381,46055849,46053798	Gene ID= ENSG00000080618.13 TPM= 2.63 Transcript Type= protein_coding
chr13	46053186	46105026	46053186	46105026	-	ENST00000181383.8@CPB2	ENST00000181383.8	protein_coding	46104936,46087745,46084219,46082441,46078800,46073873,46067307,46064648,46058179,46055762,46053186	46105026,46087820,46084343,46082549,46078901,46073977,46067417,46064741,46058381,46055849,46053798	Gene ID= ENSG00000080618.13 TPM= 66.84 Transcript Type= protein_coding
chr13	46125920	46182173	46125920	46182173	-	transcript928.chr13.nnic@LCP1	transcript928.chr13.nnic	protein_coding	46182111,46168463,46159599,46158826,46158522,46156438,46154805,46152780,46150936,46148352,46146908,46144442,46143290,46142292,46134127,46130814,46125920	46182173,46168594,46159686,46158989,46158651,46156570,46154886,46152945,46151078,46148447,46147103,46144520,46143404,46142425,46134250,46130938,46127723	Gene ID= ENSG00000136167.13 TPM= 56.04 Transcript Type= NA
chr13	46125926	46182324	46125926	46182324	-	ENST00000323076.6@LCP1	ENST00000323076.6	protein_coding	46182111,46159599,46158826,46158522,46156438,46154805,46152780,46150936,46148352,46146908,46144442,46143290,46142292,46134127,46130814,46125926	46182324,46159686,46158989,46158651,46156570,46154886,46152945,46151078,46148447,46147103,46144520,46143404,46142425,46134250,46130938,46127723	Gene ID= ENSG00000136167.13 TPM= 492.72 Transcript Type= protein_coding
chr13	46342000	46387500	46342000	46387500	-	ENST00000429979.5@RUBCNL	ENST00000429979.5	protein_coding	46387134,46377890,46371941,46368733,46368042,46363115,46362538,46361441,46359486,46356432,46350113,46349286,46345447,46344741,46342000	46387500,46378005,46372597,46368815,46368249,46363213,46362598,46361573,46359631,46356496,46350351,46349347,46345600,46344831,46343497	Gene ID= ENSG00000102445.18 TPM= 3.5 Transcript Type= protein_coding
chr13	46342000	46387500	46342000	46387500	-	ENST00000378797.6@RUBCNL	ENST00000378797.6	protein_coding	46387134,46368733,46368042,46363115,46362538,46361441,46359486,46356432,46350113,46349286,46345447,46344741,46342000	46387500,46368815,46368249,46363213,46362598,46361573,46359631,46356496,46350351,46349347,46345600,46344831,46343497	Gene ID= ENSG00000102445.18 TPM= 1.17 Transcript Type= protein_coding
chr13	46342964	46387235	46342964	46387235	-	ENST00000441284.5@RUBCNL	ENST00000441284.5	protein_coding	46387134,46377890,46371941,46368733,46368038,46363115,46362538,46361441,46359486,46356432,46350113,46349286,46345447,46344741,46342964	46387235,46378005,46372597,46368815,46368249,46363213,46362598,46361573,46359631,46356496,46350351,46349347,46345600,46344831,46343497	Gene ID= ENSG00000102445.18 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr13	46553168	46753040	46553168	46753040	+	ENST00000311191.10@LRCH1	ENST00000311191.10	protein_coding	46553168,46650201,46669030,46681741,46685905,46687852,46689133,46692536,46694893,46699336,46701121,46705068,46705268,46711791,46712525,46723221,46728847,46733921,46750540	46553703,46650345,46669156,46681846,46686041,46687979,46689196,46692641,46695017,46699403,46701207,46705157,46705304,46711844,46712597,46723330,46728984,46733998,46753040	Gene ID= ENSG00000136141.14 TPM= 42.03 Transcript Type= protein_coding
chr13	46708278	46712195	46708278	46712195	-	transcript951.chr13.nnic@NA	transcript951.chr13.nnic	NA	46708278	46712195	Gene ID= novel_gene_chr13_952 TPM= 3.5 Transcript Type= NA
chr13	46771256	46797232	46771256	46797232	-	ENST00000378720.7@ESD	ENST00000378720.7	protein_coding	46797105,46793397,46791346,46787021,46784252,46782667,46781496,46779935,46777456,46771256	46797232,46793444,46791420,46787109,46784350,46782791,46781615,46780033,46777623,46771496	Gene ID= ENSG00000139684.13 TPM= 47.87 Transcript Type= protein_coding
chr13	46771256	46797184	46771256	46797184	-	transcript959.chr13.nic@ESD	transcript959.chr13.nic	protein_coding	46797105,46793397,46791346,46784252,46782667,46781496,46779935,46777456,46771256	46797184,46793444,46791420,46787109,46782791,46781615,46780033,46777623,46771496	Gene ID= ENSG00000139684.13 TPM= 5.84 Transcript Type= NA
chr13	46775386	46797184	46775386	46797184	-	transcript960.chr13.nic@ESD	transcript960.chr13.nic	protein_coding	46797105,46793397,46791346,46787021,46784252,46782667,46781496,46779935,46775386	46797184,46793444,46791420,46787109,46784350,46782791,46781615,46780033,46777623	Gene ID= ENSG00000139684.13 TPM= 4.67 Transcript Type= NA
chr13	47942656	48001354	47942656	48001354	-	ENST00000378654.8@SUCLA2	ENST00000378654.8	protein_coding	48001180,47996843,47988882,47988541,47973264,47968595,47954396,47954140,47949483,47948940,47942656	48001354,47997023,47988981,47988703,47973392,47968733,47954557,47954282,47949603,47949028,47943445	Gene ID= ENSG00000136143.14 TPM= 71.22 Transcript Type= protein_coding
chr13	47942656	48001320	47942656	48001320	-	transcript964.chr13.nic@SUCLA2	transcript964.chr13.nic	protein_coding	48001180,47996843,47988882,47988541,47973264,47968595,47954140,47949483,47948940,47942656	48001320,47997023,47988981,47988703,47973392,47968733,47954557,47949603,47949028,47943445	Gene ID= ENSG00000136143.14 TPM= 2.34 Transcript Type= NA
chr13	48037567	48047222	48037567	48047222	+	ENST00000258662.2@NUDT15	ENST00000258662.2	protein_coding	48037567,48040920,48045660	48037904,48041116,48047222	Gene ID= ENSG00000136159.3 TPM= 24.52 Transcript Type= protein_coding
chr13	48053323	48095119	48053323	48095119	-	transcript974.chr13.nic@MED4	transcript974.chr13.nic	protein_coding	48094954,48090352,48086282,48083371,48081645,48079844,48077153,48053323	48095119,48090418,48086452,48083428,48081731,48079975,48077311,48053491	Gene ID= ENSG00000136146.14 TPM= 2.34 Transcript Type= NA
chr13	48075956	48095104	48075956	48095104	-	ENST00000258648.6@MED4	ENST00000258648.6	protein_coding	48094954,48090352,48086282,48083371,48081645,48079844,48075956	48095104,48090418,48086452,48083428,48081731,48079975,48077311	Gene ID= ENSG00000136146.14 TPM= 14.01 Transcript Type= protein_coding
chr13	48087916	48092181	48087916	48092181	+	transcript988.chr13.nnic@NA	transcript988.chr13.nnic	NA	48087916	48092181	Gene ID= novel_gene_chr13_989 TPM= 2.34 Transcript Type= NA
chr13	48092283	48095144	48092283	48095144	-	transcript990.chr13.nnic@NA	transcript990.chr13.nnic	NA	48092283	48095144	Gene ID= novel_gene_chr13_991 TPM= 2.34 Transcript Type= NA
chr13	48233158	48270357	48233158	48270357	+	ENST00000378565.9@ITM2B	ENST00000378565.9	protein_coding	48233158,48253808,48256177,48258126,48258797,48261139	48233477,48253936,48256383,48258236,48258947,48270357	Gene ID= ENSG00000136156.12 TPM= 5.84 Transcript Type= protein_coding
chr13	48233203	48261388	48233203	48261388	+	ENST00000378549.5@ITM2B	ENST00000378549.5	protein_coding	48233203,48253808,48258797,48261139	48233477,48253936,48258947,48261388	Gene ID= ENSG00000136156.12 TPM= 8.17 Transcript Type= protein_coding
chr13	48303736	48481886	48303736	48481886	+	transcript1004.chr13.nnic@RB1	transcript1004.chr13.nnic	protein_coding	48303736,48307280,48342599,48345080,48347825,48348956,48360017,48362815,48364894,48367494,48368527,48373405,48380053,48380165,48381247,48452993,48456204,48459688,48463731,48464998,48465205,48473360,48476701,48477355,48479998	48304049,48307406,48342714,48345199,48347863,48349023,48360127,48362957,48364971,48367603,48368604,48373492,48380084,48380241,48381443,48453111,48456349,48459833,48463835,48465111,48465368,48473390,48476843,48477404,48481886	Gene ID= ENSG00000139687.13 TPM= 4.67 Transcript Type= NA
chr13	48411732	48413117	48411732	48413117	-	transcript1012.chr13.nnic@NA	transcript1012.chr13.nnic	NA	48411732	48413117	Gene ID= novel_gene_chr13_1013 TPM= 7.01 Transcript Type= NA
chr13	48488959	48533233	48488959	48533233	-	ENST00000344532.7@RCBTB2	ENST00000344532.7	protein_coding	48533028,48524659,48522308,48521898,48515586,48515205,48512729,48512016,48511770,48510629,48502724,48501742,48499621,48496191,48488959	48533233,48524757,48522403,48521962,48515741,48515355,48512895,48512174,48511877,48510771,48502914,48501868,48499760,48496321,48490251	Gene ID= ENSG00000136161.12 TPM= 15.76 Transcript Type= protein_coding
chr13	48488970	48535944	48488970	48535944	-	transcript1021.chr13.nnic@RCBTB2	transcript1021.chr13.nnic	protein_coding	48535683,48524659,48522308,48521898,48515586,48515205,48512729,48512016,48511770,48510629,48502724,48501742,48499621,48496191,48488970	48535944,48524757,48522403,48521962,48515741,48515355,48512895,48512174,48511877,48510771,48502914,48501868,48499760,48496321,48490251	Gene ID= ENSG00000136161.12 TPM= 2.92 Transcript Type= NA
chr13	48488970	48533256	48488970	48533256	-	ENST00000430805.6@RCBTB2	ENST00000430805.6	protein_coding	48533028,48524659,48522308,48515586,48515205,48512729,48512016,48511770,48510629,48502724,48501742,48499621,48496191,48488970	48533256,48524757,48522403,48515741,48515355,48512895,48512174,48511877,48510771,48502914,48501868,48499760,48496321,48490251	Gene ID= ENSG00000136161.12 TPM= 1.75 Transcript Type= protein_coding
chr13	48488970	48533256	48488970	48533256	-	ENST00000544904.3@RCBTB2	ENST00000544904.3	protein_coding	48533028,48515586,48515205,48512729,48512016,48511770,48510629,48502724,48501742,48499621,48496191,48488970	48533256,48515741,48515355,48512895,48512174,48511877,48510771,48502914,48501868,48499760,48496321,48490251	Gene ID= ENSG00000136161.12 TPM= 9.92 Transcript Type= protein_coding
chr13	48488970	48536002	48488970	48536002	-	transcript1026.chr13.nnic@RCBTB2	transcript1026.chr13.nnic	protein_coding	48535683,48515586,48515205,48512729,48512016,48511770,48510629,48502724,48501742,48499621,48496191,48488970	48536002,48515741,48515355,48512895,48512174,48511877,48510771,48502914,48501868,48499760,48496321,48490251	Gene ID= ENSG00000136161.12 TPM= 2.92 Transcript Type= NA
chr13	48488970	48508645	48488970	48508645	-	transcript1028.chr13.nnic@RCBTB2	transcript1028.chr13.nnic	protein_coding	48504226,48502724,48501742,48499621,48496191,48488970	48508645,48502914,48501868,48499760,48496321,48490251	Gene ID= ENSG00000136161.12 TPM= 4.09 Transcript Type= NA
chr13	48771128	48771827	48771128	48771827	+	ENST00000453033.1@PSME2P2	ENST00000453033.1	processed_pseudogene	48771128	48771827	Gene ID= ENSG00000225131.2 TPM= 1.17 Transcript Type= processed_pseudogene
chr13	48976600	49209593	48976600	49209593	+	transcript1034.chr13.nic@FNDC3A	transcript1034.chr13.nic	protein_coding	48976600,49006152,49075289,49114655,49131137,49136332,49138747,49145778,49167244,49168613,49172043,49174435,49175367,49178568,49185964,49187122,49188515,49191015,49191209,49196877,49197725,49197982,49198362,49201133,49201800,49203157,49207081	48976917,49006289,49075364,49114731,49131374,49136601,49138805,49145935,49167303,49168751,49172096,49174559,49175541,49178654,49186102,49187190,49188633,49191120,49191384,49196990,49197874,49198265,49198574,49201229,49201966,49203284,49209593	Gene ID= ENSG00000102531.16 TPM= 3.5 Transcript Type= NA
chr13	49110313	49209593	49110313	49209593	+	ENST00000398316.7@FNDC3A	ENST00000398316.7	protein_coding	49110313,49114655,49131137,49136332,49138747,49145778,49167244,49168613,49172043,49174435,49175367,49178568,49185964,49187122,49188515,49191015,49191209,49196877,49197725,49197982,49198362,49201800,49203157,49207081	49110406,49114731,49131374,49136601,49138805,49145935,49167303,49168751,49172096,49174559,49175541,49178654,49186102,49187190,49188633,49191120,49191384,49196990,49197874,49198265,49198574,49201966,49203284,49209593	Gene ID= ENSG00000102531.16 TPM= 16.93 Transcript Type= protein_coding
chr13	48975912	49209779	48975912	49209779	+	ENST00000492622.6@FNDC3A	ENST00000492622.6	protein_coding	48975912,49006152,49075289,49114655,49131137,49136332,49138747,49145778,49167244,49168613,49172043,49174435,49175367,49178568,49185964,49187122,49188515,49191015,49191209,49196877,49197725,49197982,49198362,49201800,49203157,49207081	48976177,49006289,49075364,49114731,49131374,49136601,49138805,49145935,49167303,49168751,49172096,49174559,49175541,49178654,49186102,49187190,49188633,49191120,49191384,49196990,49197874,49198265,49198574,49201966,49203284,49209779	Gene ID= ENSG00000102531.16 TPM= 4.09 Transcript Type= protein_coding
chr13	48976673	49209607	48976673	49209607	+	ENST00000484074.5@FNDC3A	ENST00000484074.5	protein_coding	48976673,49006152,49075289,49114655,49131137,49136332,49138747,49145778,49167244,49168613,49172043,49174435,49175367,49178568,49185964,49187122,49188515,49191015,49191209,49196877,49197725,49197982,49198362,49201800,49203157,49207081	48976917,49006289,49075364,49114731,49131374,49136601,49138805,49145935,49167303,49168751,49172096,49174559,49175541,49178654,49186102,49187190,49188633,49191109,49191384,49196990,49197874,49198265,49198574,49201966,49203284,49209607	Gene ID= ENSG00000102531.16 TPM= 9.92 Transcript Type= nonsense_mediated_decay
chr13	48976609	49209778	48976609	49209778	+	ENST00000541916.5@FNDC3A	ENST00000541916.5	protein_coding	48976609,49006152,49075289,49114655,49131137,49136332,49138747,49145778,49167244,49168613,49172043,49174435,49175367,49178568,49185964,49187122,49188515,49191015,49191209,49196877,49197725,49197982,49198362,49201800,49203157,49207081	48976917,49006289,49075364,49114731,49131374,49136601,49138805,49145935,49167303,49168751,49172096,49174559,49175541,49178654,49186102,49187190,49188633,49191120,49191384,49196990,49197874,49198265,49198574,49201966,49203284,49209778	Gene ID= ENSG00000102531.16 TPM= 1.75 Transcript Type= protein_coding
chr13	49149165	49150243	49149165	49150243	-	transcript1051.chr13.nnic@NA	transcript1051.chr13.nnic	NA	49149165	49150243	Gene ID= novel_gene_chr13_1052 TPM= 2.34 Transcript Type= NA
chr13	49247925	49293485	49247925	49293485	+	ENST00000251108.10@CDADC1	ENST00000251108.10	protein_coding	49247925,49248871,49255839,49259346,49267490,49274291,49278350,49280509,49286222,49291684	49248119,49248965,49255913,49259523,49268059,49274340,49278519,49280698,49286282,49293485	Gene ID= ENSG00000102543.14 TPM= 5.84 Transcript Type= protein_coding
chr13	49308650	49401599	49308650	49401599	-	ENST00000355854.8@CAB39L	ENST00000355854.8	protein_coding	49401133,49382800,49376967,49359714,49350744,49344179,49339677,49331947,49308650	49401599,49382941,49377131,49359832,49350912,49344238,49339742,49332090,49310993	Gene ID= ENSG00000102547.18 TPM= 7.01 Transcript Type= protein_coding
chr13	49444275	49491911	49444275	49491911	+	transcript1071.chr13.nic@SETDB2	transcript1071.chr13.nic	protein_coding	49444275,49451553,49460107,49461097,49467864,49476476,49480219,49480947,49482737,49483464,49485630,49488290,49490822,49491732	49444857,49451909,49460232,49461162,49467960,49477039,49480335,49481116,49482962,49483563,49485723,49488630,49490910,49491911	Gene ID= ENSG00000136169.16 TPM= 3.5 Transcript Type= NA
chr13	49444296	49491911	49444296	49491911	+	transcript1073.chr13.nnic@SETDB2	transcript1073.chr13.nnic	protein_coding	49444296,49460107,49461097,49467864,49476476,49480219,49480947,49482737,49483464,49485630,49488290,49490822,49491732	49444857,49460232,49461162,49467960,49477039,49480335,49481116,49482962,49483563,49485723,49488630,49490910,49491911	Gene ID= ENSG00000136169.16 TPM= 4.67 Transcript Type= NA
chr13	49495715	49528976	49495715	49528976	+	transcript1088.chr13.nic@PHF11	transcript1088.chr13.nic	protein_coding	49495715,49506635,49513059,49518018,49523175,49524085,49526387,49528511	49496095,49506756,49513166,49522107,49523241,49524216,49526458,49528976	Gene ID= ENSG00000136147.17 TPM= 6.42 Transcript Type= NA
chr13	49495961	49528987	49495961	49528987	+	ENST00000378319.7@PHF11	ENST00000378319.7	protein_coding	49495961,49506635,49513059,49518018,49520894,49522043,49523175,49524085,49526387,49528511	49496095,49506756,49513166,49518151,49520940,49522107,49523241,49524216,49526458,49528987	Gene ID= ENSG00000136147.17 TPM= 14.59 Transcript Type= protein_coding
chr13	49531946	49585583	49531946	49585583	-	ENST00000378302.6@RCBTB1	ENST00000378302.6	protein_coding	49585444,49580505,49567154,49566618,49559918,49555515,49552178,49551326,49549458,49544737,49541676,49540876,49531946	49585583,49580584,49567320,49566768,49560084,49555673,49552285,49551468,49549648,49544863,49541827,49541006,49534262	Gene ID= ENSG00000136144.11 TPM= 93.41 Transcript Type= protein_coding
chr13	49628299	49633872	49628299	49633872	+	ENST00000282026.1@ARL11	ENST00000282026.1	protein_coding	49628299,49630430	49628615,49633872	Gene ID= ENSG00000152213.3 TPM= 4.67 Transcript Type= protein_coding
chr13	49660726	49691499	49660726	49691499	-	transcript1095.chr13.nnic@EBPL	transcript1095.chr13.nnic	protein_coding	49691254,49669777,49668497,49663057,49660726	49691499,49669846,49668569,49663195,49661208	Gene ID= ENSG00000123179.13 TPM= 3.12 Transcript Type= NA
chr13	49660726	49691475	49660726	49691475	-	ENST00000242827.10@EBPL	ENST00000242827.10	protein_coding	49691254,49669777,49663057,49660726	49691475,49669846,49663195,49661208	Gene ID= ENSG00000123179.13 TPM= 50.99 Transcript Type= protein_coding
chr13	49660723	49691438	49660723	49691438	-	ENST00000473576.6@EBPL	ENST00000473576.6	protein_coding	49691254,49663057,49660723	49691438,49663195,49661208	Gene ID= ENSG00000123179.13 TPM= 6.62 Transcript Type= processed_transcript
chr13	49660723	49691463	49660723	49691463	-	ENST00000378272.9@EBPL	ENST00000378272.9	protein_coding	49691254,49669777,49660723	49691463,49669846,49661208	Gene ID= ENSG00000123179.13 TPM= 2.34 Transcript Type= protein_coding
chr13	49676182	49679017	49676182	49679017	+	transcript1110.chr13.nnic@NA	transcript1110.chr13.nnic	NA	49676182	49679017	Gene ID= novel_gene_chr13_1111 TPM= 2.34 Transcript Type= NA
chr13	49699307	49792263	49699307	49792263	-	transcript1113.chr13.nnic@KPNA3	transcript1113.chr13.nnic	protein_coding	49791901,49746949,49732957,49732747,49732605,49732371,49725416,49722477,49721955,49719775,49710891,49709572,49706268,49706098,49705621,49702386,49699307	49792263,49746993,49733046,49732776,49732657,49732466,49725501,49722563,49722124,49719819,49711022,49709700,49706372,49706169,49705783,49702480,49701898	Gene ID= ENSG00000102753.9 TPM= 5.84 Transcript Type= NA
chr13	49787683	49792680	49787683	49792680	-	transcript1120.chr13.nnic@NA	transcript1120.chr13.nnic	NA	49787683	49792680	Gene ID= novel_gene_chr13_1121 TPM= 3.5 Transcript Type= NA
chr13	49912706	49936490	49912706	49936490	-	ENST00000378195.6@SPRYD7	ENST00000378195.6	protein_coding	49936130,49927919,49921478,49912706	49936490,49928085,49921580,49915160	Gene ID= ENSG00000123178.14 TPM= 2.34 Transcript Type= protein_coding
chr13	49912706	49936340	49912706	49936340	-	ENST00000361840.7@SPRYD7	ENST00000361840.7	protein_coding	49936130,49931018,49927919,49921478,49912706	49936340,49931134,49928085,49921580,49915160	Gene ID= ENSG00000123178.14 TPM= 1.17 Transcript Type= protein_coding
chr13	49940892	49942687	49940892	49942687	-	transcript1158.chr13.nnic@NA	transcript1158.chr13.nnic	NA	49940892	49942687	Gene ID= novel_gene_chr13_1159 TPM= 2.34 Transcript Type= NA
chr13	49956143	49956273	49956143	49956273	-	transcript1160.chr13.nnic@NA	transcript1160.chr13.nnic	NA	49956143	49956273	Gene ID= novel_gene_chr13_1161 TPM= 2.34 Transcript Type= NA
chr13	50065472	50125539	50065472	50125539	-	transcript1153.chr13.nic@DLEU2	transcript1153.chr13.nic	antisense_RNA	50125302,50075559,50065472	50125539,50075653,50068163	Gene ID= ENSG00000231607.10 TPM= 3.5 Transcript Type= NA
chr13	49997019	50014331	49997019	50014331	+	ENST00000420995.6@TRIM13	ENST00000420995.6	protein_coding	49997019,49997667,50011935	49997131,49997763,50014331	Gene ID= ENSG00000204977.9 TPM= 9.34 Transcript Type= protein_coding
chr13	49997032	50018451	49997032	50018451	+	ENST00000378182.3@TRIM13	ENST00000378182.3	protein_coding	49997032,50011935	49997763,50018451	Gene ID= ENSG00000204977.9 TPM= 23.35 Transcript Type= protein_coding
chr13	49997059	50013168	49997059	50013168	+	ENST00000457662.2@TRIM13	ENST00000457662.2	protein_coding	49997059,49997667,50011935	49997216,49997763,50013168	Gene ID= ENSG00000204977.9 TPM= 3.5 Transcript Type= protein_coding
chr13	50082171	50107218	50082171	50107218	+	ENST00000469754.2@DLEU1	ENST00000469754.2	processed_transcript	50082171,50083142,50104704	50082557,50083194,50107218	Gene ID= ENSG00000176124.11 TPM= 2.34 Transcript Type= lincRNA
chr13	50082171	50105297	50082171	50105297	+	ENST00000378180.8@DLEU1	ENST00000378180.8	processed_transcript	50082171,50104704	50082557,50105297	Gene ID= ENSG00000176124.11 TPM= 1.17 Transcript Type= lincRNA
chr13	50909678	50956765	50909678	50956765	+	ENST00000336617.7@RNASEH2B	ENST00000336617.7	protein_coding	50909678,50927407,50929475,50930683,50934885,50943321,50945427,50947987,50949463,50953905,50956358	50910140,50927478,50929582,50930759,50934999,50943394,50945532,50948068,50949505,50953985,50956765	Gene ID= ENSG00000136104.19 TPM= 25.69 Transcript Type= protein_coding
chr13	50909764	50913499	50909764	50913499	+	transcript1176.chr13.nnic@NA	transcript1176.chr13.nnic	NA	50909764	50913499	Gene ID= novel_gene_chr13_1177 TPM= 5.84 Transcript Type= NA
chr13	51222334	51253582	51222334	51253582	+	ENST00000615498.4@FAM124A	ENST00000615498.4	protein_coding	51222334,51231348,51251468	51222569,51231379,51253582	Gene ID= ENSG00000150510.16 TPM= 1.17 Transcript Type= protein_coding
chr13	51365227	51452298	51365227	51452298	-	transcript1188.chr13.nic@INTS6	transcript1188.chr13.nic	protein_coding	51451978,51451025,51430294,51395300,51389319,51387386,51383589,51383329,51382029,51379462,51378239,51376048,51374654,51374208,51368939,51367805,51365227	51452298,51451174,51430383,51395483,51389444,51387540,51383741,51383461,51382123,51379572,51378454,51376174,51374796,51374439,51369310,51367898,51365845	Gene ID= ENSG00000102786.14 TPM= 4.67 Transcript Type= NA
chr13	51365227	51452998	51365227	51452998	-	ENST00000311234.8@INTS6	ENST00000311234.8	protein_coding	51452415,51451978,51451025,51430294,51395300,51389319,51387386,51383589,51383329,51382029,51379462,51378239,51376048,51374654,51374208,51368939,51367805,51365227	51452998,51452055,51451174,51430383,51395483,51389444,51387540,51383741,51383461,51382123,51379572,51378454,51376174,51374796,51374439,51369310,51367898,51365845	Gene ID= ENSG00000102786.14 TPM= 24.52 Transcript Type= protein_coding
chr13	51584440	51754110	51584440	51754110	+	transcript1219.chr13.nic@WDFY2	transcript1219.chr13.nic	protein_coding	51584440,51660596,51675170,51703596,51719198,51727678,51739049,51751310	51584824,51660663,51675243,51703650,51719348,51727790,51739175,51754110	Gene ID= ENSG00000139668.8 TPM= 2.34 Transcript Type= NA
chr13	51761396	51766798	51761396	51766798	+	transcript1230.chr13.nnic@NA	transcript1230.chr13.nnic	NA	51761396	51766798	Gene ID= novel_gene_chr13_1231 TPM= 18.68 Transcript Type= NA
chr13	51767993	51804181	51767993	51804181	-	transcript1216.chr13.nic@DHRS12	transcript1216.chr13.nic	protein_coding	51804054,51799534,51791165,51790011,51777060,51773930,51771821,51769156,51767993	51804181,51799667,51791257,51790092,51777121,51774034,51771911,51769293,51768296	Gene ID= ENSG00000102796.10 TPM= 4.67 Transcript Type= NA
chr13	51767993	51804123	51767993	51804123	-	ENST00000444610.6@DHRS12	ENST00000444610.6	protein_coding	51804054,51799534,51797826,51791165,51790011,51777060,51773930,51771821,51769156,51767993	51804123,51799667,51797908,51791257,51790092,51777121,51774034,51771911,51769293,51768296	Gene ID= ENSG00000102796.10 TPM= 5.84 Transcript Type= protein_coding
chr13	51767995	51804157	51767995	51804157	-	ENST00000218981.5@DHRS12	ENST00000218981.5	protein_coding	51804054,51799534,51791165,51790011,51777060,51773930,51771821,51767995	51804157,51799667,51791257,51790092,51777121,51774034,51771911,51769293	Gene ID= ENSG00000102796.10 TPM= 4.67 Transcript Type= protein_coding
chr13	51803838	51805630	51803838	51805630	+	ENST00000618844.1@AL162377.1	ENST00000618844.1	antisense_RNA	51803838	51805630	Gene ID= ENSG00000231856.2 TPM= 2.34 Transcript Type= antisense_RNA
chr13	51932673	52011494	51932673	52011494	-	ENST00000448424.6@ATP7B	ENST00000448424.6	protein_coding	52011287,51973935,51970492,51968444,51964872,51961837,51960148,51957516,51950272,51950007,51949662,51946284,51944109,51942386,51941081,51939051,51937476,51937276,51935593,51932673	52011494,51975168,51970749,51968607,51965033,51961913,51960322,51957607,51950399,51950161,51949796,51946478,51944291,51942554,51941224,51939193,51937679,51937393,51935695,51935029	Gene ID= ENSG00000123191.14 TPM= 3.5 Transcript Type= protein_coding
chr13	52012398	52029657	52012398	52029657	+	ENST00000523764.1@ALG11	ENST00000523764.1	protein_coding	52012398,52028319	52012462,52029657	Gene ID= ENSG00000253710.2 TPM= 2.34 Transcript Type= protein_coding
chr13	52012411	52017713	52012411	52017713	+	ENST00000616513.1@ALG11	ENST00000616513.1	protein_coding	52012411,52015783	52012462,52017713	Gene ID= ENSG00000253710.2 TPM= 2.34 Transcript Type= protein_coding
chr13	52012414	52029664	52012414	52029664	+	ENST00000521508.1@ALG11	ENST00000521508.1	protein_coding	52012414,52018913,52024006,52028319	52012462,52019143,52024937,52029664	Gene ID= ENSG00000253710.2 TPM= 2.34 Transcript Type= protein_coding
chr13	52132643	52159861	52132643	52159861	-	ENST00000610828.4@NEK3	ENST00000610828.4	protein_coding	52159543,52156075,52154080,52153895,52152609,52151325,52151146,52148415,52144691,52143915,52141020,52136800,52136116,52135729,52133689,52132643	52159861,52156248,52154173,52153992,52152692,52151392,52151232,52148469,52144891,52143987,52141069,52136902,52136259,52135863,52133815,52133226	Gene ID= ENSG00000136098.16 TPM= 7.01 Transcript Type= protein_coding
chr13	52167709	52194452	52167709	52194452	-	transcript1261.chr13.nnic@MRPS31P5	transcript1261.chr13.nnic	transcribed_unprocessed_pseudogene	52194254,52189639,52186683,52183976,52180582,52175639,52171158,52169987,52167709	52194452,52189914,52186823,52184114,52180654,52175776,52171248,52170056,52169304	Gene ID= ENSG00000243406.6 TPM= 2.34 Transcript Type= NA
chr13	52167709	52194452	52167709	52194452	-	transcript1262.chr13.nnic@MRPS31P5	transcript1262.chr13.nnic	transcribed_unprocessed_pseudogene	52194254,52189639,52186683,52183976,52180582,52175639,52171158,52169987,52167709	52194452,52189914,52186823,52184114,52180654,52175776,52171248,52170099,52169304	Gene ID= ENSG00000243406.6 TPM= 4.67 Transcript Type= NA
chr13	52360371	52406196	52360371	52406196	-	transcript1265.chr13.nnic@THSD1	transcript1265.chr13.nnic	protein_coding	52406031,52402543,52397232,52386028,52360371	52406196,52402681,52398194,52386186,52361053	Gene ID= ENSG00000136114.15 TPM= 4.67 Transcript Type= NA
chr13	52377187	52406175	52377187	52406175	-	transcript1267.chr13.nnic@THSD1	transcript1267.chr13.nnic	protein_coding	52406031,52402543,52397232,52386028,52377187	52406175,52402694,52398194,52386186,52378789	Gene ID= ENSG00000136114.15 TPM= 5.84 Transcript Type= NA
chr13	52377167	52406494	52377167	52406494	-	ENST00000349258.8@THSD1	ENST00000349258.8	protein_coding	52406031,52402543,52397232,52377167	52406494,52402681,52398194,52378789	Gene ID= ENSG00000136114.15 TPM= 17.51 Transcript Type= protein_coding
chr13	52377187	52406128	52377187	52406128	-	ENST00000258613.4@THSD1	ENST00000258613.4	protein_coding	52406031,52402543,52397232,52386028,52377187	52406128,52402681,52398194,52386186,52378789	Gene ID= ENSG00000136114.15 TPM= 46.7 Transcript Type= protein_coding
chr13	52412602	52450244	52412602	52450244	-	ENST00000611132.4@VPS36	ENST00000611132.4	protein_coding	52449931,52442377,52439098,52436290,52434793,52433662,52427187,52426989,52425932,52423574,52417992,52417057,52416017,52412602	52450244,52442445,52439168,52436404,52434882,52433748,52427219,52427066,52426066,52423639,52418056,52417141,52416093,52415923	Gene ID= ENSG00000136100.12 TPM= 4.47 Transcript Type= protein_coding
chr13	52412602	52450630	52412602	52450630	-	transcript1283.chr13.nnic@VPS36	transcript1283.chr13.nnic	protein_coding	52450499,52442377,52439098,52436290,52434793,52433662,52427187,52426989,52425932,52417992,52417057,52416017,52412602	52450630,52442445,52439168,52436404,52434882,52433748,52427219,52427066,52426066,52418056,52417141,52416093,52415923	Gene ID= ENSG00000136100.12 TPM= 5.06 Transcript Type= NA
chr13	52412602	52450622	52412602	52450622	-	ENST00000378060.8@VPS36	ENST00000378060.8	protein_coding	52450499,52442377,52439098,52436290,52434793,52433662,52427187,52426989,52425932,52423574,52417992,52417057,52416017,52412602	52450622,52442445,52439168,52436404,52434882,52433748,52427219,52427066,52426066,52423639,52418056,52417141,52416093,52415923	Gene ID= ENSG00000136100.12 TPM= 17.32 Transcript Type= protein_coding
chr13	52447787	52450627	52447787	52450627	-	transcript1289.chr13.nnic@NA	transcript1289.chr13.nnic	NA	52447787	52450627	Gene ID= novel_gene_chr13_1290 TPM= 2.34 Transcript Type= NA
chr13	52455439	52476349	52455439	52476349	+	ENST00000258607.9@CKAP2	ENST00000258607.9	protein_coding	52455439,52456523,52460899,52461058,52462363,52465295,52468278,52473829,52474895	52455626,52456607,52460974,52461926,52462567,52465465,52468347,52474084,52476349	Gene ID= ENSG00000136108.14 TPM= 7.01 Transcript Type= protein_coding
chr13	52455467	52476628	52455467	52476628	+	ENST00000378037.9@CKAP2	ENST00000378037.9	protein_coding	52455467,52456523,52460896,52461058,52462363,52465295,52468278,52473829,52474895	52455626,52456607,52460974,52461926,52462567,52465465,52468347,52474084,52476628	Gene ID= ENSG00000136108.14 TPM= 3.5 Transcript Type= protein_coding
chr13	52617494	52643796	52617494	52643796	+	transcript1297.chr13.nic@AL137058.2	transcript1297.chr13.nic	processed_transcript	52617494,52621989,52627438,52632422,52637305,52642369	52617682,52622264,52627578,52632494,52637446,52643796	Gene ID= ENSG00000273784.4 TPM= 101.97 Transcript Type= NA
chr13	52617494	52643796	52617494	52643796	+	transcript1298.chr13.nic@AL137058.2	transcript1298.chr13.nic	processed_transcript	52617494,52621989,52627438,52632422,52637305,52642406	52617682,52622264,52627578,52632494,52637446,52643796	Gene ID= ENSG00000273784.4 TPM= 107.8 Transcript Type= NA
chr13	52617494	52643796	52617494	52643796	+	transcript1295.chr13.nic@MRPS31P4	transcript1295.chr13.nic	transcribed_unprocessed_pseudogene	52617494,52621989,52627438,52629219,52632422,52637305,52642406	52617682,52622264,52627578,52629359,52632494,52637446,52643796	Gene ID= ENSG00000250299.5 TPM= 103.13 Transcript Type= NA
chr13	52652839	52687872	52652839	52687872	+	ENST00000343788.10@SUGT1	ENST00000343788.10	protein_coding	52652839,52653046,52657532,52658399,52659179,52661475,52662649,52663096,52664035,52665637,52666812,52676230,52679974,52687734	52652958,52653103,52657622,52658468,52659249,52661570,52662702,52663112,52664057,52665733,52666919,52676320,52680155,52687872	Gene ID= ENSG00000165416.14 TPM= 9.34 Transcript Type= protein_coding
chr13	52697237	52700752	52697237	52700752	+	transcript1313.chr13.nnic@NA	transcript1313.chr13.nnic	NA	52697237	52700752	Gene ID= novel_gene_chr13_1314 TPM= 7.01 Transcript Type= NA
chr13	57630106	57725540	57630106	57725540	+	transcript1318.chr13.nnic@PCDH17	transcript1318.chr13.nnic	protein_coding	57630106,57630755,57666468,57666661,57724612	57630648,57635111,57666526,57666833,57725540	Gene ID= ENSG00000118946.11 TPM= 12.26 Transcript Type= NA
chr13	57631810	57725540	57631810	57725540	+	ENST00000484979.5@PCDH17	ENST00000484979.5	protein_coding	57631810,57666468,57666653,57724612	57635111,57666526,57666833,57725540	Gene ID= ENSG00000118946.11 TPM= 54.88 Transcript Type= nonsense_mediated_decay
chr13	57634383	57725293	57634383	57725293	+	ENST00000612954.4@PCDH17	ENST00000612954.4	protein_coding	57634383,57666468,57666664,57724612	57635111,57666526,57666833,57725293	Gene ID= ENSG00000118946.11 TPM= 4.67 Transcript Type= protein_coding
chr13	59665583	60163987	59665583	60163987	-	ENST00000400324.8@DIAPH3	ENST00000400324.8	protein_coding	60163587,60132957,60112010,60093628,60042690,60016071,60015913,60010533,60008544,59992473,59992068,59991158,59983769,59980795,59974352,59970852,59969944,59924775,59916155,59911735,59879229,59861407,59839324,59833107,59810788,59774728,59774189,59665583	60163987,60132989,60112186,60093732,60042820,60016145,60015982,60010669,60008649,59992583,59992186,59991274,59983887,59980859,59974456,59971160,59970058,59924870,59916249,59911836,59879468,59861536,59839448,59833271,59810923,59774823,59774248,59666846	Gene ID= ENSG00000139734.17 TPM= 3.5 Transcript Type= protein_coding
chr13	60396457	60573878	60396457	60573878	+	ENST00000196169.7@TDRD3	ENST00000196169.7	protein_coding	60396457,60439688,60444687,60460380,60467238,60483775,60485799,60494435,60509763,60510630,60528367,60535108,60567525,60573613	60397010,60439772,60444748,60460540,60467379,60483846,60485948,60494575,60509919,60510755,60529217,60535233,60567650,60573878	Gene ID= ENSG00000083544.13 TPM= 3.5 Transcript Type= protein_coding
chr13	60410081	60573872	60410081	60573872	+	transcript1338.chr13.nnic@TDRD3	transcript1338.chr13.nnic	protein_coding	60410081,60439688,60444683,60460380,60467238,60483775,60485799,60494435,60509763,60510630,60528367,60535108,60567525,60573616	60410164,60439772,60444748,60460540,60467379,60483846,60485948,60494575,60509919,60510755,60529217,60535233,60567650,60573872	Gene ID= ENSG00000083544.13 TPM= 2.92 Transcript Type= NA
chr13	60397213	60573872	60397213	60573872	+	transcript1340.chr13.nnic@TDRD3	transcript1340.chr13.nnic	protein_coding	60397213,60444683,60460380,60467238,60483775,60485799,60494435,60509763,60510630,60528367,60535108,60567525,60573616	60397405,60444748,60460540,60467379,60483846,60485948,60494575,60509919,60510755,60529217,60535233,60567650,60573872	Gene ID= ENSG00000083544.13 TPM= 2.92 Transcript Type= NA
chr13	61409685	61415522	61409685	61415522	-	ENST00000409204.4@PCDH20	ENST00000409204.4	protein_coding	61415027,61409685	61415522,61413966	Gene ID= ENSG00000280165.1 TPM= 1.17 Transcript Type= protein_coding
chr13	67201015	67230445	67201015	67230445	-	ENST00000377861.4@PCDH9	ENST00000377861.4	protein_coding	67229780,67201015	67230445,67228575	Gene ID= ENSG00000184226.14 TPM= 2.34 Transcript Type= protein_coding
chr13	66302834	67230445	66302834	67230445	-	ENST00000544246.5@PCDH9	ENST00000544246.5	protein_coding	67229780,67225405,66631210,66302834	67230445,67228575,66631411,66305028	Gene ID= ENSG00000184226.14 TPM= 1.17 Transcript Type= protein_coding
chr13	71437966	71867192	71437966	71867192	-	ENST00000613252.4@DACH1	ENST00000613252.4	protein_coding	71865922,71681795,71630556,71572840,71559820,71557024,71488997,71479169,71475706,71475141,71437966	71867192,71681910,71630717,71573012,71559955,71557158,71489148,71479316,71475849,71475209,71440692	Gene ID= ENSG00000276644.4 TPM= 18.68 Transcript Type= protein_coding
chr13	72708357	72727687	72708357	72727687	-	ENST00000377818.3@MZT1	ENST00000377818.3	protein_coding	72727524,72718952,72708357	72727687,72719097,72710345	Gene ID= ENSG00000204899.5 TPM= 29.19 Transcript Type= protein_coding
chr13	72757443	72781925	72757443	72781925	-	ENST00000377780.8@DIS3	ENST00000377780.8	protein_coding	72781605,72781289,72778187,72777420,72775925,72775211,72773946,72773684,72772693,72772159,72771795,72771081,72770904,72768785,72765972,72763451,72761923,72761646,72761363,72760529,72757443	72781925,72781356,72778380,72777493,72776092,72775375,72774059,72773821,72772839,72772275,72771896,72771145,72770988,72768912,72766058,72763607,72762137,72761814,72761521,72760651,72759878	Gene ID= ENSG00000083520.14 TPM= 1.17 Transcript Type= protein_coding
chr13	72752169	72781933	72752169	72781933	-	ENST00000377767.8@DIS3	ENST00000377767.8	protein_coding	72781605,72780846,72778187,72777420,72775925,72775211,72773946,72773684,72772693,72772159,72771795,72771081,72770904,72768785,72765972,72763451,72761923,72761646,72761363,72760529,72752169	72781933,72781003,72778380,72777493,72776092,72775375,72774059,72773821,72772839,72772275,72771896,72771145,72770988,72768912,72766058,72763607,72762137,72761814,72761521,72760651,72759878	Gene ID= ENSG00000083520.14 TPM= 3.5 Transcript Type= protein_coding
chr13	72778185	72779186	72778185	72779186	+	transcript1368.chr13.nnic@NA	transcript1368.chr13.nnic	NA	72778185	72779186	Gene ID= novel_gene_chr13_1369 TPM= 2.34 Transcript Type= NA
chr13	72782165	73016461	72782165	73016461	+	transcript1371.chr13.nnic@PIBF1	transcript1371.chr13.nnic	protein_coding	72782165,72783423,72792447,72795359,72797907,72821849,72827010,72827733,72835243,72854057,72893784,72904462,72908531,72917076,72931165,72965274,72973591,72998822,73015869	72782349,72783721,72792547,72795557,72798026,72821982,72827118,72827914,72835368,72854155,72893949,72904870,72908681,72917166,72931267,72965404,72973675,72998995,73016461	Gene ID= ENSG00000083535.15 TPM= 2.34 Transcript Type= NA
chr13	72782059	73016461	72782059	73016461	+	ENST00000326291.10@PIBF1	ENST00000326291.10	protein_coding	72782059,72783423,72792447,72795359,72797907,72821849,72827010,72827733,72835243,72854057,72893784,72908531,72917076,72931165,72965274,72973591,72998822,73015869	72782349,72783721,72792547,72795557,72798026,72821982,72827118,72827914,72835368,72854155,72893949,72908681,72917166,72931267,72965404,72973675,72998995,73016461	Gene ID= ENSG00000083535.15 TPM= 15.18 Transcript Type= protein_coding
chr13	73058792	73077542	73058792	73077542	+	ENST00000377687.5@KLF5	ENST00000377687.5	protein_coding	73058792,73061861,73063824,73075708	73059588,73062734,73063883,73077542	Gene ID= ENSG00000102554.13 TPM= 31.53 Transcript Type= protein_coding
chr13	73063989	73067782	73063989	73067782	-	transcript1390.chr13.nnic@NA	transcript1390.chr13.nnic	NA	73063989	73067782	Gene ID= novel_gene_chr13_1391 TPM= 22.18 Transcript Type= NA
chr13	74127687	74129699	74127687	74129699	+	transcript1393.chr13.nnic@NA	transcript1393.chr13.nnic	NA	74127687	74129699	Gene ID= novel_gene_chr13_1394 TPM= 2.34 Transcript Type= NA
chr13	75310650	75482305	75310650	75482305	-	transcript1399.chr13.nic@TBC1D4	transcript1399.chr13.nic	protein_coding	75481270,75362026,75359769,75356147,75349170,75341496,75341125,75336921,75327752,75326197,75310650	75482305,75362607,75359858,75356251,75349302,75341587,75341235,75337040,75327826,75326423,75312898	Gene ID= ENSG00000136111.12 TPM= 4.67 Transcript Type= NA
chr13	75284672	75316584	75284672	75316584	-	transcript1400.chr13.nic@TBC1D4	transcript1400.chr13.nic	protein_coding	75316472,75312738,75309942,75306313,75302243,75299330,75294854,75292102,75288934,75284672	75316584,75312898,75310151,75306471,75302401,75299574,75295013,75292271,75289110,75287025	Gene ID= ENSG00000136111.12 TPM= 3.5 Transcript Type= NA
chr13	75284672	75310319	75284672	75310319	-	transcript1401.chr13.nic@TBC1D4	transcript1401.chr13.nic	protein_coding	75309942,75306313,75302243,75299330,75294854,75292102,75288934,75284672	75310319,75306471,75302401,75299574,75295013,75292271,75289110,75287025	Gene ID= ENSG00000136111.12 TPM= 2.92 Transcript Type= NA
chr13	75284665	75482114	75284665	75482114	-	ENST00000377625.6@TBC1D4	ENST00000377625.6	protein_coding	75481270,75362026,75359769,75356147,75349170,75341496,75341125,75336921,75327752,75326197,75312738,75309942,75306313,75302243,75299330,75294854,75292102,75288934,75284665	75482114,75362607,75359858,75356251,75349302,75341587,75341235,75337040,75327826,75326423,75312898,75310151,75306471,75302401,75299574,75295013,75292271,75289110,75287025	Gene ID= ENSG00000136111.12 TPM= 19.27 Transcript Type= protein_coding
chr13	75525219	75538802	75525219	75538802	-	ENST00000377615.7@COMMD6	ENST00000377615.7	protein_coding	75538753,75537764,75537664,75530114,75525219	75538802,75537920,75537675,75530266,75526639	Gene ID= ENSG00000188243.12 TPM= 159.96 Transcript Type= protein_coding
chr13	75526436	75537841	75526436	75537841	-	ENST00000497707.5@COMMD6	ENST00000497707.5	protein_coding	75537764,75537664,75530311,75526436	75537841,75537675,75530408,75526639	Gene ID= ENSG00000188243.12 TPM= 8.76 Transcript Type= processed_transcript
chr13	75549791	75605933	75549791	75605933	+	ENST00000377595.7@UCHL3	ENST00000377595.7	protein_coding	75549791,75549976,75560753,75566695,75567227,75569460,75594915,75604769,75605729	75549862,75549987,75560881,75566851,75567312,75569507,75594990,75604827,75605933	Gene ID= ENSG00000118939.17 TPM= 39.7 Transcript Type= protein_coding
chr13	75760572	75858675	75760572	75858675	+	transcript1410.chr13.nic@LMO7	transcript1410.chr13.nic	protein_coding	75760572,75760932,75795401,75796636,75800684,75804289,75809154,75817161,75819393,75821177,75823565,75833051,75834226,75835152,75836397,75838140,75840085,75840391,75841109,75841628,75842851,75845327,75849079,75853092,75855260,75856506,75857921	75760665,75761038,75795431,75796749,75800882,75804541,75809183,75817278,75819535,75821609,75823873,75833165,75834387,75835339,75836457,75838196,75840110,75840495,75841201,75841983,75842916,75845379,75849292,75853388,75855368,75856608,75858675	Gene ID= ENSG00000136153.19 TPM= 25.04 Transcript Type= NA
chr13	75760538	75858675	75760538	75858675	+	transcript1411.chr13.nic@LMO7	transcript1411.chr13.nic	protein_coding	75760538,75760932,75795401,75796636,75800684,75804289,75809154,75817161,75819393,75821177,75823565,75833051,75834226,75835233,75836397,75838140,75840085,75840391,75841109,75841628,75842851,75845327,75849079,75853092,75855260,75856506,75857921	75760665,75761038,75795431,75796749,75800882,75804541,75809183,75817278,75819535,75821609,75823873,75833165,75834387,75835339,75836457,75838196,75840110,75840495,75841201,75841983,75842916,75845379,75849292,75853388,75855368,75856608,75858675	Gene ID= ENSG00000136153.19 TPM= 24.46 Transcript Type= NA
chr13	75760659	75858675	75760659	75858675	+	transcript1414.chr13.nic@LMO7	transcript1414.chr13.nic	protein_coding	75760659,75795401,75796636,75800684,75804289,75809154,75817161,75819393,75821177,75823565,75833051,75834226,75835152,75836397,75838140,75840085,75840391,75841109,75841628,75842851,75845327,75849079,75853092,75855260,75856506,75857921	75761038,75795431,75796749,75800882,75804541,75809183,75817278,75819535,75821609,75823873,75833165,75834387,75835339,75836457,75838196,75840110,75840495,75841201,75841983,75842916,75845379,75849292,75853388,75855368,75856608,75858675	Gene ID= ENSG00000136153.19 TPM= 44.11 Transcript Type= NA
chr13	75760659	75858675	75760659	75858675	+	transcript1415.chr13.nic@LMO7	transcript1415.chr13.nic	protein_coding	75760659,75795401,75796636,75800684,75804289,75809154,75817161,75819393,75821177,75823565,75833051,75834226,75835233,75836397,75838140,75840085,75840391,75841109,75841628,75842851,75845327,75849079,75853092,75855260,75856506,75857921	75761038,75795431,75796749,75800882,75804541,75809183,75817278,75819535,75821609,75823873,75833165,75834387,75835339,75836457,75838196,75840110,75840495,75841201,75841983,75842916,75845379,75849292,75853388,75855368,75856608,75858675	Gene ID= ENSG00000136153.19 TPM= 36.52 Transcript Type= NA
chr13	75823108	75858675	75823108	75858675	+	transcript1418.chr13.nnic@LMO7	transcript1418.chr13.nnic	protein_coding	75823108,75823565,75833051,75834226,75835152,75836397,75838140,75840085,75840391,75841109,75841628,75842851,75845327,75849079,75853092,75855260,75856506,75857921	75823139,75823873,75833165,75834387,75835339,75836457,75838196,75840110,75840495,75841201,75841983,75842916,75845379,75849292,75853388,75855368,75856608,75858675	Gene ID= ENSG00000136153.19 TPM= 17.75 Transcript Type= NA
chr13	75856637	75858675	75856637	75858675	+	ENST00000605961.1@LMO7	ENST00000605961.1	protein_coding	75856637	75858675	Gene ID= ENSG00000136153.19 TPM= 2.34 Transcript Type= processed_transcript
chr13	76880166	76886390	76880166	76886390	-	ENST00000377474.3@KCTD12	ENST00000377474.3	protein_coding	76880166	76886390	Gene ID= ENSG00000178695.5 TPM= 61.88 Transcript Type= protein_coding
chr13	76990660	77005117	76990660	77005117	+	ENST00000636183.1@CLN5	ENST00000636183.1	protein_coding	76990660,76995063,76995902,77000458	76992271,76995228,76996127,77005117	Gene ID= ENSG00000102805.14 TPM= 2.34 Transcript Type= protein_coding
chr13	76992044	77002477	76992044	77002477	+	ENST00000636780.1@CLN5	ENST00000636780.1	protein_coding	76992044,76995063,76995902,76998043,77000458	76992271,76995228,76996127,76998085,77002477	Gene ID= ENSG00000102805.14 TPM= 3.5 Transcript Type= protein_coding
chr13	76992084	77002506	76992084	77002506	+	ENST00000377453.8@CLN5	ENST00000377453.8	protein_coding	76992084,76995063,76995902,77000458	76992271,76995228,76996127,77002506	Gene ID= ENSG00000102805.14 TPM= 42.03 Transcript Type= protein_coding
chr13	77005254	77027195	77005254	77027195	-	transcript1452.chr13.nnic@FBXL3	transcript1452.chr13.nnic	protein_coding	77026827,77018600,77015409,77005254	77027195,77018722,77015580,77007788	Gene ID= ENSG00000005812.10 TPM= 18.68 Transcript Type= NA
chr13	77005254	77027150	77005254	77027150	-	ENST00000355619.9@FBXL3	ENST00000355619.9	protein_coding	77026827,77021513,77018600,77015409,77005254	77027150,77021861,77018722,77015580,77007788	Gene ID= ENSG00000005812.10 TPM= 95.74 Transcript Type= protein_coding
chr13	77535632	77645263	77535632	77645263	+	transcript1472.chr13.nic@SCEL	transcript1472.chr13.nic	protein_coding	77535632,77555857,77556596,77559804,77563831,77568295,77569371,77572124,77589144,77591395,77593514,77597545,77599329,77599689,77602065,77602654,77603076,77604356,77608056,77609058,77610047,77612891,77613893,77617599,77617803,77618004,77627947,77634379,77637120,77640676,77642706,77644258	77535824,77555918,77556713,77559863,77563899,77568333,77569451,77572189,77589224,77591460,77593573,77597589,77599388,77599748,77602124,77602713,77603135,77604415,77608115,77609117,77610106,77612941,77613955,77617658,77617862,77618060,77628009,77634450,77637194,77640784,77642808,77645263	Gene ID= ENSG00000136155.16 TPM= 54.99 Transcript Type= NA
chr13	77535632	77645263	77535632	77645263	+	transcript1481.chr13.nic@SCEL	transcript1481.chr13.nic	protein_coding	77535632,77555857,77556596,77559804,77563831,77568295,77569371,77572124,77589144,77591395,77597545,77599329,77599689,77602065,77602654,77603076,77604356,77608056,77609058,77610047,77612891,77613893,77617599,77617803,77618004,77627947,77634379,77637120,77640676,77642706,77644258	77535824,77555918,77556713,77559863,77563899,77568333,77569451,77572189,77589224,77591460,77597589,77599388,77599748,77602124,77602713,77603135,77604415,77608115,77609117,77610106,77612941,77613955,77617658,77617862,77618060,77628009,77634450,77637194,77640784,77642808,77645263	Gene ID= ENSG00000136155.16 TPM= 25.02 Transcript Type= NA
chr13	77535706	77645263	77535706	77645263	+	transcript1485.chr13.nnic@SCEL	transcript1485.chr13.nnic	protein_coding	77535706,77555857,77556596,77559804,77563831,77569371,77572124,77589144,77591395,77593514,77597545,77599329,77599689,77602065,77602654,77603076,77604356,77608056,77609058,77610047,77612891,77613893,77617599,77617803,77618004,77627947,77634379,77637120,77640676,77642706,77644258	77535824,77555918,77556713,77559863,77563899,77569451,77572189,77589224,77591460,77593573,77597589,77599388,77599748,77602124,77602713,77603135,77604415,77608115,77609117,77610106,77612941,77613955,77617658,77617862,77618060,77628009,77634450,77637194,77640784,77642808,77645263	Gene ID= ENSG00000136155.16 TPM= 4.79 Transcript Type= NA
chr13	77535685	77645263	77535685	77645263	+	transcript1494.chr13.nnic@SCEL	transcript1494.chr13.nnic	protein_coding	77535685,77555857,77556596,77559804,77563831,77569371,77572124,77589144,77591395,77597545,77599329,77599689,77602065,77602654,77603076,77604356,77608056,77609058,77610047,77612891,77613893,77617599,77617803,77618004,77627947,77634379,77637120,77640676,77642706,77644258	77535824,77555918,77556713,77559863,77563899,77569451,77572189,77589224,77591460,77597589,77599388,77599748,77602124,77602713,77603135,77604415,77608115,77609117,77610106,77612941,77613955,77617658,77617862,77618060,77628009,77634450,77637194,77640784,77642808,77645263	Gene ID= ENSG00000136155.16 TPM= 5.95 Transcript Type= NA
chr13	77535759	77645263	77535759	77645263	+	ENST00000377246.7@SCEL	ENST00000377246.7	protein_coding	77535759,77555857,77556596,77559804,77563831,77567680,77568295,77569371,77572124,77589144,77591395,77597545,77599329,77599689,77602065,77602654,77603076,77604356,77608056,77609058,77610047,77612891,77613893,77617599,77617803,77618004,77627947,77634379,77637120,77640676,77642706,77644258	77535824,77555918,77556713,77559863,77563899,77567748,77568333,77569451,77572189,77589224,77591460,77597589,77599388,77599748,77602124,77602713,77603135,77604415,77608115,77609117,77610106,77612941,77613955,77617658,77617862,77618060,77628009,77634450,77637194,77640784,77642808,77645263	Gene ID= ENSG00000136155.16 TPM= 4.79 Transcript Type= protein_coding
chr13	77535760	77644509	77535760	77644509	+	ENST00000349847.3@SCEL	ENST00000349847.3	protein_coding	77535760,77555857,77556596,77559804,77563831,77567680,77568295,77569371,77572124,77589144,77591395,77593514,77597545,77599329,77599689,77602065,77602654,77603076,77604356,77608056,77609058,77610047,77612891,77613893,77617599,77617803,77618004,77627947,77634379,77637120,77640676,77642706,77644258	77535824,77555918,77556713,77559863,77563899,77567748,77568333,77569451,77572189,77589224,77591460,77593573,77597589,77599388,77599748,77602124,77602713,77603135,77604415,77608115,77609117,77610106,77612941,77613955,77617658,77617862,77618060,77628009,77634450,77637194,77640784,77642808,77644509	Gene ID= ENSG00000136155.16 TPM= 3.5 Transcript Type= protein_coding
chr13	77550010	77553079	77550010	77553079	-	transcript1520.chr13.nnic@NA	transcript1520.chr13.nnic	NA	77550010	77553079	Gene ID= novel_gene_chr13_1521 TPM= 3.5 Transcript Type= NA
chr13	77697688	77764229	77697688	77764229	+	transcript1524.chr13.nic@SLAIN1	transcript1524.chr13.nic	protein_coding	77697688,77719532,77743016,77744283,77746514,77753203,77760828,77763145	77698539,77719671,77743165,77744432,77746855,77753358,77761110,77764229	Gene ID= ENSG00000139737.21 TPM= 3.5 Transcript Type= NA
chr13	77697854	77764242	77697854	77764242	+	ENST00000418532.5@SLAIN1	ENST00000418532.5	protein_coding	77697854,77719532,77744283,77746514,77753203,77760828,77763145	77698539,77719671,77744432,77746855,77753358,77761110,77764242	Gene ID= ENSG00000139737.21 TPM= 5.84 Transcript Type= protein_coding
chr13	77895481	77919768	77895481	77919768	-	ENST00000377211.8@EDNRB	ENST00000377211.8	protein_coding	77919397,77918091,77903495,77903156,77901058,77900521,77899859,77895481	77919768,77918624,77903607,77903360,77901207,77900654,77899967,77898334	Gene ID= ENSG00000136160.14 TPM= 9.34 Transcript Type= protein_coding
chr13	77895489	77918810	77895489	77918810	-	ENST00000334286.7@EDNRB	ENST00000334286.7	protein_coding	77918091,77903495,77903156,77901058,77900521,77899859,77895489	77918810,77903607,77903360,77901207,77900654,77899967,77898334	Gene ID= ENSG00000136160.14 TPM= 61.88 Transcript Type= protein_coding
chr13	78614291	78659179	78614291	78659179	-	ENST00000282003.6@RNF219	ENST00000282003.6	protein_coding	78659049,78644862,78642122,78638823,78635110,78614291	78659179,78644997,78642213,78639071,78635198,78617122	Gene ID= ENSG00000152193.7 TPM= 35.03 Transcript Type= protein_coding
chr13	79319954	79337137	79319954	79337137	-	transcript1552.chr13.nic@RBM26	transcript1552.chr13.nic	protein_coding	79334344,79322349,79319954	79337137,79322462,79320710	Gene ID= ENSG00000139746.15 TPM= 4.67 Transcript Type= NA
chr13	79402437	79406248	79402437	79406248	-	transcript1553.chr13.nnic@NA	transcript1553.chr13.nnic	NA	79402437	79406248	Gene ID= novel_gene_chr13_1554 TPM= 3.5 Transcript Type= NA
chr13	79481152	79556075	79481152	79556075	+	ENST00000218652.11@NDFIP2	ENST00000218652.11	protein_coding	79481152,79520810,79533323,79539682,79543558,79548328,79551017,79552516	79481524,79520975,79533456,79539775,79543682,79548394,79551122,79556075	Gene ID= ENSG00000102471.13 TPM= 21.6 Transcript Type= protein_coding
chr13	79481474	79554096	79481474	79554096	+	ENST00000620924.1@NDFIP2	ENST00000620924.1	protein_coding	79481474,79520810,79533323,79539682,79543558,79548328,79551017,79552516	79481524,79520975,79533456,79539775,79543682,79548394,79551122,79554096	Gene ID= ENSG00000102471.13 TPM= 2.92 Transcript Type= protein_coding
chr13	80335976	80339659	80335976	80339659	-	ENST00000377102.5@SPRY2	ENST00000377102.5	protein_coding	80338733,80335976	80339659,80337756	Gene ID= ENSG00000136158.11 TPM= 1.95 Transcript Type= protein_coding
chr13	80335976	80339243	80335976	80339243	-	transcript1567.chr13.nnic@SPRY2	transcript1567.chr13.nnic	protein_coding	80338839,80335976	80339243,80337756	Gene ID= ENSG00000136158.11 TPM= 5.45 Transcript Type= NA
chr13	80335976	80340951	80335976	80340951	-	ENST00000377104.3@SPRY2	ENST00000377104.3	protein_coding	80340622,80335976	80340951,80337756	Gene ID= ENSG00000136158.11 TPM= 5.45 Transcript Type= protein_coding
chr13	85792790	85799488	85792790	85799488	-	ENST00000400286.2@SLITRK6	ENST00000400286.2	protein_coding	85798914,85792790	85799488,85796532	Gene ID= ENSG00000184564.8 TPM= 1.17 Transcript Type= protein_coding
chr13	91693185	91766022	91693185	91766022	+	transcript1574.chr13.nnic@GPC5	transcript1574.chr13.nnic	protein_coding	91693185,91728532,91756295,91764777,91765201	91693881,91728665,91756420,91764856,91766022	Gene ID= ENSG00000179399.14 TPM= 2.34 Transcript Type= NA
chr13	93226842	94407401	93226842	94407401	+	ENST00000377047.8@GPC6	ENST00000377047.8	protein_coding	93226842,93545263,93830154,94027729,94286349,94305980,94382414,94398466,94403015	93227616,93545421,93830545,94027894,94286479,94306123,94382550,94398641,94407401	Gene ID= ENSG00000183098.10 TPM= 8.17 Transcript Type= protein_coding
chr13	94574051	94596264	94574051	94596264	-	transcript1584.chr13.nic@TGDS	transcript1584.chr13.nic	protein_coding	94595975,94593841,94592241,94590853,94583094,94581091,94579894,94578730,94578005,94577371,94576314,94574051	94596264,94593907,94592309,94590943,94583236,94581189,94579953,94578773,94578170,94577429,94576411,94574852	Gene ID= ENSG00000088451.10 TPM= 2.92 Transcript Type= NA
chr13	94574051	94596257	94574051	94596257	-	ENST00000261296.6@TGDS	ENST00000261296.6	protein_coding	94596051,94593841,94592241,94590853,94583094,94581091,94579894,94578730,94578005,94577371,94576314,94574051	94596257,94593907,94592309,94590943,94583236,94581189,94579953,94578773,94578170,94577429,94576411,94574852	Gene ID= ENSG00000088451.10 TPM= 8.76 Transcript Type= protein_coding
chr13	94601861	94629283	94601861	94629283	+	transcript1599.chr13.nnic@GPR180	transcript1599.chr13.nnic	protein_coding	94601861,94605391,94612190,94619468,94621078,94623109,94625966,94627013	94602072,94605549,94612390,94619517,94621235,94623300,94626043,94629283	Gene ID= ENSG00000152749.7 TPM= 4.67 Transcript Type= NA
chr13	94712716	94716246	94712716	94716246	+	ENST00000438290.2@SOX21-AS1	ENST00000438290.2	lincRNA	94712716,94713638	94713393,94716246	Gene ID= ENSG00000227640.2 TPM= 1.17 Transcript Type= lincRNA
chr13	95019829	95301433	95019829	95301433	-	transcript1605.chr13.nnic@ABCC4	transcript1605.chr13.nnic	protein_coding	95301241,95266112,95247643,95246975,95234610,95210692,95209434,95207800,95206532,95194836,95188453,95186701,95177997,95177707,95170532,95166158,95164378,95163610,95163122,95161189,95115922,95083140,95075432,95074214,95073204,95071662,95062704,95053095,95044266,95043682,95034605,95019829	95301433,95266264,95247753,95247095,95234834,95210781,95209597,95207925,95206781,95194937,95188542,95186892,95178091,95177793,95170628,95166367,95164518,95163647,95163216,95161335,95116001,95083290,95075551,95074324,95073304,95071853,95062859,95053184,95044438,95043787,95034739,95021682	Gene ID= ENSG00000125257.13 TPM= 2.34 Transcript Type= NA
chr13	95019829	95236109	95019829	95236109	-	transcript1610.chr13.nnic@ABCC4	transcript1610.chr13.nnic	protein_coding	95236010,95234610,95210692,95209434,95207800,95206532,95194836,95188453,95186701,95177997,95177707,95170532,95166158,95164378,95163610,95163122,95161189,95115922,95083140,95075432,95074214,95073204,95071662,95062704,95053095,95044266,95043682,95034605,95019829	95236109,95234834,95210781,95209597,95207925,95206781,95194937,95188542,95186892,95178091,95177793,95170628,95166367,95164518,95163647,95163216,95161335,95116001,95083290,95075551,95074324,95073304,95071853,95062859,95053184,95044438,95043787,95034739,95021682	Gene ID= ENSG00000125257.13 TPM= 2.34 Transcript Type= NA
chr13	95208609	95301415	95208609	95301415	-	transcript1622.chr13.nic@ABCC4	transcript1622.chr13.nic	protein_coding	95301241,95247643,95246975,95234610,95210692,95208609	95301415,95247753,95247095,95234834,95210781,95209597	Gene ID= ENSG00000125257.13 TPM= 2.34 Transcript Type= NA
chr13	95019829	95301429	95019829	95301429	-	ENST00000376887.8@ABCC4	ENST00000376887.8	protein_coding	95301241,95247643,95246975,95234610,95210692,95209434,95207800,95206532,95194836,95188453,95186701,95177997,95177707,95170532,95166158,95164378,95163610,95163122,95161189,95115922,95083140,95075432,95074214,95073204,95071662,95062704,95053095,95044266,95043682,95034605,95019829	95301429,95247753,95247095,95234834,95210781,95209597,95207925,95206781,95194937,95188542,95186892,95178091,95177793,95170628,95166367,95164518,95163647,95163216,95161335,95116001,95083290,95075551,95074324,95073304,95071853,95062859,95053184,95044438,95043787,95034739,95021682	Gene ID= ENSG00000125257.13 TPM= 31.53 Transcript Type= protein_coding
chr13	95095944	95301446	95095944	95301446	-	ENST00000629385.1@ABCC4	ENST00000629385.1	protein_coding	95301241,95247643,95246975,95234610,95210692,95209434,95207800,95206532,95194836,95188453,95186701,95177997,95177707,95170532,95166158,95164378,95163610,95163122,95161189,95115922,95095944	95301446,95247753,95247095,95234834,95210781,95209597,95207925,95206781,95194937,95188542,95186892,95178091,95177793,95170628,95166367,95164518,95163647,95163216,95161335,95116001,95096179	Gene ID= ENSG00000125257.13 TPM= 2.34 Transcript Type= protein_coding
chr13	95286560	95291008	95286560	95291008	+	transcript1625.chr13.nnic@NA	transcript1625.chr13.nnic	NA	95286560	95291008	Gene ID= novel_gene_chr13_1626 TPM= 3.5 Transcript Type= NA
chr13	95581952	95644703	95581952	95644703	-	ENST00000376829.6@DZIP1	ENST00000376829.6	protein_coding	95644377,95643601,95643043,95641994,95641295,95633234,95629989,95624768,95622343,95619885,95612037,95611445,95609457,95606003,95599365,95593944,95590279,95589803,95589154,95587539,95586006,95584736,95581952	95644703,95643698,95643257,95642241,95641855,95633321,95630113,95624929,95622480,95619947,95612177,95611493,95609513,95606059,95599424,95594086,95590441,95589932,95589207,95587729,95586136,95584910,95582313	Gene ID= ENSG00000134874.17 TPM= 3.5 Transcript Type= protein_coding
chr13	95677111	95787082	95677111	95787082	+	transcript1639.chr13.nic@DNAJC3	transcript1639.chr13.nic	protein_coding	95677111,95709227,95723242,95725178,95757644,95760040,95760679,95763643,95763833,95785939,95787007	95677337,95709337,95723366,95725252,95757796,95760221,95760798,95763748,95763953,95786071,95787082	Gene ID= ENSG00000102580.14 TPM= 2.34 Transcript Type= NA
chr13	95677139	95794989	95677139	95794989	+	ENST00000602402.5@DNAJC3	ENST00000602402.5	protein_coding	95677139,95709227,95723242,95725178,95757644,95760040,95760679,95763643,95763833,95785939,95787007,95790873	95677337,95709337,95723366,95725252,95757796,95760221,95760798,95763748,95763953,95786071,95787155,95794989	Gene ID= ENSG00000102580.14 TPM= 88.74 Transcript Type= protein_coding
chr13	95924394	96053407	95924394	96053407	-	transcript1646.chr13.nic@UGGT2	transcript1646.chr13.nic	protein_coding	96053155,96031889,96023629,96023040,96013307,95999211,95996063,95989973,95986333,95983804,95972580,95970112,95949335,95947996,95947037,95939957,95936924,95927213,95927028,95924394	96053407,96031971,96023759,96023152,96013481,95999307,95996135,95990073,95986432,95983864,95972671,95970262,95949454,95948081,95947172,95940091,95937088,95927336,95927126,95925774	Gene ID= ENSG00000102595.19 TPM= 2.34 Transcript Type= NA
chr13	95801580	96053383	95801580	96053383	-	ENST00000376747.7@UGGT2	ENST00000376747.7	protein_coding	96053155,96031889,96023629,96023040,96013307,95999211,95996063,95989973,95986333,95983804,95972580,95970112,95949335,95947996,95947037,95939957,95936924,95927213,95927028,95925680,95902854,95900807,95895180,95894562,95890862,95887892,95884491,95877698,95877279,95867339,95863629,95860788,95859591,95856158,95854315,95853543,95837086,95832927,95801580	96053383,96031971,96023759,96023152,96013481,95999307,95996135,95990073,95986432,95983864,95972671,95970262,95949454,95948081,95947172,95940091,95937088,95927336,95927126,95925774,95903060,95900938,95895304,95894657,95890964,95887971,95884680,95877856,95877364,95867423,95863714,95860883,95859675,95856340,95854475,95853657,95837202,95833053,95801812	Gene ID= ENSG00000102595.19 TPM= 1.17 Transcript Type= protein_coding
chr13	95984910	96053400	95984910	96053400	-	ENST00000397618.7@UGGT2	ENST00000397618.7	protein_coding	96053155,96031889,96023629,96023040,96013307,95999211,95996063,95989973,95986333,95984910	96053400,96031971,96023759,96023152,96013481,95999307,95996135,95990073,95986432,95985337	Gene ID= ENSG00000102595.19 TPM= 1.17 Transcript Type= protein_coding
chr13	95990145	96053393	95990145	96053393	-	ENST00000376712.4@UGGT2	ENST00000376712.4	protein_coding	96053155,96031889,96023629,96023040,96013307,95999211,95996063,95990145	96053393,96031971,96023759,96023152,96013481,95999307,95996135,95991473	Gene ID= ENSG00000102595.19 TPM= 1.17 Transcript Type= protein_coding
chr13	97222290	97394120	97222290	97394120	+	transcript1653.chr13.nic@MBNL2	transcript1653.chr13.nic	protein_coding	97222290,97275632,97334276,97343016,97346804,97356796,97357482,97391322	97222531,97276409,97334440,97343216,97347067,97356849,97357635,97394120	Gene ID= ENSG00000139793.18 TPM= 5.84 Transcript Type= NA
chr13	97222290	97394120	97222290	97394120	+	transcript1654.chr13.nic@MBNL2	transcript1654.chr13.nic	protein_coding	97222290,97275632,97334276,97343016,97346804,97357482,97366459,97391322	97222531,97276409,97334440,97343216,97347067,97357635,97366553,97394120	Gene ID= ENSG00000139793.18 TPM= 22.18 Transcript Type= NA
chr13	97222290	97278277	97222290	97278277	+	transcript1661.chr13.nic@MBNL2	transcript1661.chr13.nic	protein_coding	97222290,97275632	97222531,97278277	Gene ID= ENSG00000139793.18 TPM= 3.5 Transcript Type= NA
chr13	97222296	97394119	97222296	97394119	+	ENST00000343600.8@MBNL2	ENST00000343600.8	protein_coding	97222296,97275632,97334276,97343016,97346804,97357482,97391322	97222531,97276409,97334440,97343216,97347067,97357635,97394119	Gene ID= ENSG00000139793.18 TPM= 67.72 Transcript Type= protein_coding
chr13	97348076	97351577	97348076	97351577	-	transcript1662.chr13.nnic@NA	transcript1662.chr13.nnic	NA	97348076	97351577	Gene ID= novel_gene_chr13_1663 TPM= 10.51 Transcript Type= NA
chr13	97370609	97372124	97370609	97372124	-	transcript1664.chr13.nnic@NA	transcript1664.chr13.nnic	NA	97370609	97372124	Gene ID= novel_gene_chr13_1665 TPM= 3.5 Transcript Type= NA
chr13	97434222	97469128	97434222	97469128	+	ENST00000245304.4@RAP2A	ENST00000245304.4	protein_coding	97434222,97464205	97434784,97469128	Gene ID= ENSG00000125249.6 TPM= 2.34 Transcript Type= protein_coding
chr13	97976632	98021882	97976632	98021882	+	ENST00000490680.5@IPO5	ENST00000490680.5	protein_coding	97976632,97982503,97985421,97989062,97990126,97990433,97992892,97993105,97997531,98000539,98002467,98002684,98002864,98006130,98008059,98009881,98010103,98012246,98014042,98015530,98015726,98016729,98018485,98019581,98020992,98021736	97976786,97982583,97985613,97989164,97990222,97990537,97993014,97993225,97997618,98000645,98002591,98002773,98003037,98006348,98008142,98010013,98010224,98012342,98014214,98015641,98015781,98016851,98018704,98019809,98021133,98021882	Gene ID= ENSG00000065150.18 TPM= 16.35 Transcript Type= protein_coding
chr13	98143052	98436101	98143052	98436101	+	transcript1699.chr13.nic@FARP1	transcript1699.chr13.nic	protein_coding	98143052,98213220,98343762,98365395,98368117,98377821,98384730,98385667,98388383,98389957,98390812,98393643,98395227,98409338,98410734,98411901,98424572,98431043,98435576	98143492,98213413,98343866,98365437,98368195,98377918,98384844,98385814,98388478,98390120,98390880,98393718,98395476,98409525,98410823,98412034,98424650,98431280,98436101	Gene ID= ENSG00000152767.16 TPM= 7.01 Transcript Type= NA
chr13	98793487	98978086	98793487	98978086	-	transcript1718.chr13.nic@DOCK9	transcript1718.chr13.nic	protein_coding	98977784,98955435,98930168,98925837,98923302,98922051,98920954,98915329,98914328,98904632,98902972,98902288,98901778,98898179,98897488,98888632,98888360,98888158,98886532,98885708,98884971,98883813,98883042,98881892,98881558,98880547,98879898,98868231,98867928,98867425,98863370,98863019,98860405,98855898,98853408,98850047,98848592,98845329,98837494,98831649,98831348,98829643,98829307,98826830,98825872,98824398,98810169,98809352,98807661,98804999,98800288,98797389,98797115,98793487	98978086,98955551,98930257,98925919,98923371,98922146,98921088,98915503,98914395,98904706,98903112,98902491,98901900,98898261,98897610,98888711,98888547,98888223,98886624,98885831,98885092,98883899,98883131,98882007,98881627,98880672,98879969,98868377,98868011,98867536,98863548,98863132,98860522,98856031,98853522,98850113,98848639,98845372,98837609,98831786,98831530,98829756,98829522,98826887,98825940,98824504,98810291,98809465,98807807,98805209,98800478,98797489,98797253,98794748	Gene ID= ENSG00000088387.18 TPM= 8.41 Transcript Type= NA
chr13	98793487	99086696	98793487	99086696	-	transcript1720.chr13.nic@DOCK9	transcript1720.chr13.nic	protein_coding	99086223,98955435,98930168,98925837,98923302,98922051,98920954,98915329,98914328,98904632,98902972,98902288,98901778,98898179,98897488,98888632,98888360,98888158,98886532,98885708,98884971,98883813,98883042,98881892,98881558,98880547,98879898,98868231,98867928,98867425,98863370,98863019,98860405,98855898,98853408,98850047,98848592,98845924,98837494,98831649,98831348,98829643,98829307,98826830,98825872,98824398,98810169,98809352,98807661,98804999,98800288,98797389,98797115,98793487	99086696,98955551,98930257,98925919,98923371,98922146,98921088,98915503,98914395,98904706,98903112,98902491,98901900,98898261,98897610,98888711,98888547,98888223,98886624,98885831,98885092,98883899,98883131,98882007,98881627,98880672,98879969,98868377,98868011,98867536,98863548,98863132,98860522,98856031,98853522,98850113,98848639,98846060,98837609,98831786,98831530,98829756,98829522,98826887,98825940,98824504,98810291,98809465,98807807,98805209,98800478,98797489,98797253,98794748	Gene ID= ENSG00000088387.18 TPM= 7.62 Transcript Type= NA
chr13	98793487	98978086	98793487	98978086	-	transcript1724.chr13.nic@DOCK9	transcript1724.chr13.nic	protein_coding	98977784,98955435,98930168,98925837,98923302,98922051,98920954,98915329,98914328,98904632,98902972,98902288,98901778,98898179,98897488,98888632,98888360,98888158,98886532,98885708,98884971,98883813,98883042,98881892,98881558,98880547,98879898,98868231,98867928,98867425,98863370,98863019,98860405,98855898,98853408,98850047,98848592,98845329,98837494,98831649,98831348,98829643,98829307,98826830,98824398,98810169,98809352,98807661,98804999,98800288,98797389,98797115,98793487	98978086,98955551,98930257,98925919,98923371,98922146,98921088,98915503,98914395,98904706,98903112,98902491,98901900,98898261,98897610,98888711,98888547,98888223,98886624,98885831,98885092,98883899,98883131,98882007,98881627,98880672,98879969,98868377,98868011,98867536,98863548,98863132,98860522,98856031,98853522,98850113,98848639,98845372,98837609,98831786,98831530,98829756,98829522,98826887,98824504,98810291,98809465,98807807,98805209,98800478,98797489,98797253,98794748	Gene ID= ENSG00000088387.18 TPM= 9.57 Transcript Type= NA
chr13	98793487	99086696	98793487	99086696	-	transcript1725.chr13.nic@DOCK9	transcript1725.chr13.nic	protein_coding	99086223,98955435,98930168,98925837,98923302,98922051,98920954,98915329,98914328,98904632,98902972,98902288,98901778,98898179,98897488,98888632,98888360,98888158,98886532,98885708,98884971,98883813,98883042,98881892,98881558,98880547,98879898,98868231,98867928,98867425,98863370,98863019,98860405,98855898,98853408,98850047,98848592,98845329,98837494,98831649,98831348,98829643,98829307,98826830,98824398,98810169,98809352,98807661,98804999,98800288,98797389,98797115,98793487	99086696,98955551,98930257,98925919,98923371,98922146,98921088,98915503,98914395,98904706,98903112,98902491,98901900,98898261,98897610,98888711,98888547,98888223,98886624,98885831,98885092,98883899,98883131,98882007,98881627,98880672,98879969,98868377,98868011,98867536,98863548,98863132,98860522,98856031,98853522,98850113,98848639,98845372,98837609,98831786,98831530,98829756,98829522,98826887,98824504,98810291,98809465,98807807,98805209,98800478,98797489,98797253,98794748	Gene ID= ENSG00000088387.18 TPM= 8.79 Transcript Type= NA
chr13	98793487	99086696	98793487	99086696	-	transcript1726.chr13.nic@DOCK9	transcript1726.chr13.nic	protein_coding	99086223,98955435,98930168,98925837,98923302,98922051,98920954,98915329,98914328,98904632,98902972,98902288,98901778,98898179,98897488,98888632,98888360,98888158,98886532,98885708,98884971,98883813,98883042,98881892,98881558,98880547,98879898,98868231,98867928,98867425,98863370,98863019,98860405,98855898,98853408,98850047,98848592,98845924,98837494,98831649,98831348,98829643,98829307,98826830,98824398,98810169,98809352,98807661,98804999,98800288,98797389,98797115,98793487	99086696,98955551,98930257,98925919,98923371,98922146,98921088,98915503,98914395,98904706,98903112,98902491,98901900,98898261,98897610,98888711,98888547,98888223,98886624,98885831,98885092,98883899,98883131,98882007,98881627,98880672,98879969,98868377,98868011,98867536,98863548,98863132,98860522,98856031,98853522,98850113,98848639,98846060,98837609,98831786,98831530,98829756,98829522,98826887,98824504,98810291,98809465,98807807,98805209,98800478,98797489,98797253,98794748	Gene ID= ENSG00000088387.18 TPM= 13.46 Transcript Type= NA
chr13	99075534	99078337	99075534	99078337	-	transcript1743.chr13.nnic@NA	transcript1743.chr13.nnic	NA	99075534	99078337	Gene ID= novel_gene_chr13_1744 TPM= 4.67 Transcript Type= NA
chr13	99086407	99088624	99086407	99088624	+	transcript1741.chr13.nnic@NA	transcript1741.chr13.nnic	NA	99086407	99088624	Gene ID= novel_gene_chr13_1742 TPM= 16.35 Transcript Type= NA
chr13	99196377	99200710	99196377	99200710	-	ENST00000426037.6@UBAC2-AS1	ENST00000426037.6	lincRNA	99200366,99196377	99200710,99197802	Gene ID= ENSG00000228889.6 TPM= 1.17 Transcript Type= lincRNA
chr13	99200854	99386427	99200854	99386427	+	transcript1745.chr13.nnic@UBAC2	transcript1745.chr13.nnic	protein_coding	99200854,99201429,99238427,99243832,99244515,99314097,99318022,99329142,99340320,99367787,99385228	99200939,99201567,99238554,99243951,99244624,99314220,99318069,99329200,99340565,99367906,99386427	Gene ID= ENSG00000134882.15 TPM= 4.67 Transcript Type= NA
chr13	99294530	99307405	99294530	99307405	-	ENST00000376414.4@GPR183	ENST00000376414.4	protein_coding	99307340,99294530	99307405,99296163	Gene ID= ENSG00000169508.6 TPM= 11.68 Transcript Type= protein_coding
chr13	99501417	99564006	99501417	99564006	+	ENST00000376387.4@TM9SF2	ENST00000376387.4	protein_coding	99501417,99517614,99520036,99529467,99536608,99537739,99539446,99540714,99541559,99543863,99546985,99549165,99552167,99554304,99555536,99559363,99562691	99501777,99517681,99520129,99529594,99536737,99537863,99539557,99540793,99541667,99543995,99547104,99549222,99552326,99554455,99555647,99559534,99564006	Gene ID= ENSG00000125304.8 TPM= 23.35 Transcript Type= protein_coding
chr13	99606696	99892564	99606696	99892564	+	ENST00000339105.8@CLYBL	ENST00000339105.8	protein_coding	99606696,99772824,99858861,99862991,99864818,99866240,99870938,99891318,99892443	99606757,99773010,99859049,99863092,99864911,99866407,99871062,99891437,99892564	Gene ID= ENSG00000125246.15 TPM= 3.5 Transcript Type= protein_coding
chr13	100089111	100530435	100089111	100530435	+	transcript1787.chr13.nic@PCCA	transcript1787.chr13.nic	protein_coding	100089111,100102883,100111841,100111993,100154979,100157287,100209332,100235842,100257595,100262729,100268689,100273196,100301460,100302924,100307192,100309833,100330561,100340157,100368472,100425633,100449252,100515427,100527297,100527675,100530098	100089225,100102960,100111888,100112061,100155092,100157340,100209463,100235878,100257673,100262831,100268783,100273346,100301603,100302998,100307260,100309908,100330671,100340259,100368574,100425731,100449305,100515567,100527344,100527752,100530435	Gene ID= ENSG00000175198.15 TPM= 2.34 Transcript Type= NA
chr13	100089015	100530432	100089015	100530432	+	ENST00000376279.7@PCCA	ENST00000376279.7	protein_coding	100089015,100102883,100111841,100111993,100154979,100157287,100209332,100235842,100257595,100262729,100268689,100273196,100301460,100302924,100307192,100309833,100330561,100340157,100368472,100425633,100449252,100527675,100530098	100089225,100102960,100111888,100112061,100155092,100157340,100209463,100235878,100257673,100262831,100268783,100273346,100301603,100302998,100307260,100309908,100330671,100340259,100368574,100425731,100449305,100527752,100530432	Gene ID= ENSG00000175198.15 TPM= 4.67 Transcript Type= protein_coding
chr13	100089083	100530435	100089083	100530435	+	ENST00000376285.5@PCCA	ENST00000376285.5	protein_coding	100089083,100102883,100111841,100111993,100154979,100157287,100209332,100235842,100257595,100262729,100268689,100273196,100301460,100302924,100307192,100309833,100330561,100340157,100368472,100425633,100449252,100515427,100527675,100530098	100089225,100102960,100111888,100112061,100155092,100157340,100209463,100235878,100257673,100262831,100268783,100273346,100301603,100302998,100307260,100309908,100330671,100340259,100368574,100425731,100449305,100515567,100527752,100530435	Gene ID= ENSG00000175198.15 TPM= 28.02 Transcript Type= protein_coding
chr13	100603927	100674879	100603927	100674879	-	ENST00000376234.7@TMTC4	ENST00000376234.7	protein_coding	100674744,100668579,100664221,100662964,100656381,100642211,100637930,100637538,100636532,100635024,100634805,100626071,100625785,100625535,100614316,100612398,100606358,100603927	100674879,100668794,100664336,100663180,100656468,100642311,100638022,100637702,100636734,100635195,100634936,100626150,100625892,100625676,100614430,100612510,100606427,100605142	Gene ID= ENSG00000125247.15 TPM= 2.34 Transcript Type= protein_coding
chr13	100603934	100674795	100603934	100674795	-	ENST00000342624.9@TMTC4	ENST00000342624.9	protein_coding	100674744,100670360,100668579,100664221,100662964,100656381,100642211,100637930,100637538,100636532,100635024,100634805,100626071,100625785,100625535,100614316,100612398,100606358,100603934	100674795,100670569,100668794,100664336,100663180,100656468,100642311,100638022,100637702,100636734,100635195,100634936,100626150,100625892,100625676,100614430,100612510,100606427,100605142	Gene ID= ENSG00000125247.15 TPM= 7.01 Transcript Type= protein_coding
chr13	101452607	101720856	101452607	101720856	+	transcript1828.chr13.nic@ITGBL1	transcript1828.chr13.nic	protein_coding	101452607,101453883,101567699,101575424,101579287,101583216,101598153,101692585,101706756,101714438,101715563,101717499	101452931,101454100,101567845,101575546,101579427,101583356,101598299,101692701,101706902,101714551,101715670,101720856	Gene ID= ENSG00000198542.13 TPM= 2.34 Transcript Type= NA
chr13	101452667	101718795	101452667	101718795	+	transcript1831.chr13.nic@ITGBL1	transcript1831.chr13.nic	protein_coding	101452667,101453883,101575424,101579287,101583216,101598153,101692585,101706756,101714438,101715563,101717499	101452931,101454100,101575546,101579427,101583356,101598299,101692701,101706902,101714551,101715670,101718795	Gene ID= ENSG00000198542.13 TPM= 2.34 Transcript Type= NA
chr13	101452615	101716444	101452615	101716444	+	ENST00000376180.7@ITGBL1	ENST00000376180.7	protein_coding	101452615,101453883,101567699,101575424,101579287,101583216,101598153,101692585,101706756,101714438,101715563	101452931,101454100,101567845,101575546,101579427,101583356,101598299,101692701,101706902,101714551,101716444	Gene ID= ENSG00000198542.13 TPM= 37.36 Transcript Type= protein_coding
chr13	102394630	102395703	102394630	102395703	+	ENST00000606448.1@FGF14-AS2	ENST00000606448.1	lincRNA	102394630	102395703	Gene ID= ENSG00000272143.1 TPM= 8.17 Transcript Type= lincRNA
chr13	102596986	102679169	102596986	102679169	+	transcript1841.chr13.nic@TPP2	transcript1841.chr13.nic	protein_coding	102596986,102604793,102614101,102616396,102618722,102622877,102627012,102627848,102629482,102630096,102633950,102635587,102636224,102637082,102638239,102640270,102643222,102644557,102644909,102647207,102648907,102649408,102657056,102663648,102664795,102674283,102676296,102678227	102597203,102604921,102614196,102616500,102618846,102623040,102627166,102627924,102629609,102630195,102634098,102635702,102636392,102637239,102638315,102640376,102643376,102644673,102646390,102647344,102649151,102649486,102657207,102663744,102664925,102674490,102676415,102679169	Gene ID= ENSG00000134900.11 TPM= 4.67 Transcript Type= NA
chr13	102596995	102657125	102596995	102657125	+	transcript1849.chr13.nic@TPP2	transcript1849.chr13.nic	protein_coding	102596995,102604793,102614101,102616396,102618722,102622877,102627012,102627848,102629482,102630096,102633950,102635587,102636224,102637082,102638239,102640270,102643222,102644557,102644909,102646294,102647207,102648907,102649408,102657056	102597203,102604921,102614196,102616500,102618846,102623040,102627166,102627924,102629609,102630195,102634098,102635702,102636392,102637239,102638315,102640376,102643376,102644673,102645009,102646390,102647344,102649151,102649486,102657125	Gene ID= ENSG00000134900.11 TPM= 5.84 Transcript Type= NA
chr13	102661251	102679169	102661251	102679169	+	transcript1852.chr13.nic@TPP2	transcript1852.chr13.nic	protein_coding	102661251,102664795,102674283,102676296,102678227	102663744,102664925,102674490,102676415,102679169	Gene ID= ENSG00000134900.11 TPM= 2.34 Transcript Type= NA
chr13	102597003	102678461	102597003	102678461	+	ENST00000376065.8@TPP2	ENST00000376065.8	protein_coding	102597003,102604793,102614101,102616396,102618722,102622877,102627012,102627848,102629482,102630096,102633950,102635587,102636224,102637082,102638239,102640270,102643222,102644557,102644909,102646294,102647207,102648907,102649408,102657056,102663648,102664795,102674283,102676296,102678227	102597203,102604921,102614196,102616500,102618846,102623040,102627166,102627924,102629609,102630195,102634098,102635702,102636392,102637239,102638315,102640376,102643376,102644673,102645009,102646390,102647344,102649151,102649486,102657207,102663744,102664925,102674490,102676415,102678461	Gene ID= ENSG00000134900.11 TPM= 12.84 Transcript Type= protein_coding
chr13	102766110	102773811	102766110	102773811	-	ENST00000376032.8@TEX30	ENST00000376032.8	protein_coding	102773682,102770012,102769311,102768260,102767273,102766110	102773811,102770086,102769541,102768311,102767478,102766580	Gene ID= ENSG00000151287.16 TPM= 8.17 Transcript Type= protein_coding
chr13	102784281	102799007	102784281	102799007	-	ENST00000376004.4@KDELC1	ENST00000376004.4	protein_coding	102798489,102796804,102793601,102793341,102791258,102790901,102789012,102787834,102786232,102784281	102799007,102797009,102793806,102793418,102791430,102791138,102789221,102787923,102786339,102784512	Gene ID= ENSG00000134901.12 TPM= 5.84 Transcript Type= protein_coding
chr13	102799049	102841533	102799049	102841533	+	ENST00000257336.5@BIVM	ENST00000257336.5	protein_coding	102799049,102805307,102807146,102816428,102821037,102821743,102822065,102831565,102834466,102838643,102839572	102799521,102805390,102807745,102816554,102821132,102821847,102822159,102831697,102834552,102838739,102841533	Gene ID= ENSG00000134897.13 TPM= 3.5 Transcript Type= protein_coding
chr13	102800343	102841533	102800343	102841533	+	transcript1866.chr13.nic@BIVM	transcript1866.chr13.nic	protein_coding	102800343,102805307,102807146,102816428,102821037,102821743,102822065,102831565,102834466,102838643,102839572	102800735,102805390,102807745,102816554,102821132,102821847,102822159,102831697,102834552,102838739,102841533	Gene ID= ENSG00000134897.13 TPM= 10.51 Transcript Type= NA
chr13	102844844	102876001	102844844	102876001	+	ENST00000355739.8@ERCC5	ENST00000355739.8	protein_coding	102844844,102852118,102853757,102854288,102856052,102858275,102861507,102862030,102865667,102866262,102866632,102868113,102872198,102873259,102875307	102846354,102852293,102853872,102854374,102856112,102858418,102861714,102863103,102865911,102866381,102866845,102868257,102872398,102873343,102876001	Gene ID= ENSG00000134899.18 TPM= 52.93 Transcript Type= protein_coding
chr13	102845797	102875983	102845797	102875983	+	transcript1876.chr13.nic@ERCC5	transcript1876.chr13.nic	protein_coding	102845797,102852118,102853757,102856052,102858275,102861507,102862030,102865667,102866262,102866632,102868113,102872198,102873259,102875307	102846354,102852293,102854374,102856112,102858418,102861714,102863103,102865911,102866381,102866845,102868257,102872398,102873343,102875983	Gene ID= ENSG00000134899.18 TPM= 10.31 Transcript Type= NA
chr13	102845797	102875983	102845797	102875983	+	transcript1878.chr13.nic@ERCC5	transcript1878.chr13.nic	protein_coding	102845797,102852118,102853757,102856052,102858275,102861507,102862030,102865667,102866632,102868113,102872198,102873259,102875307	102846354,102852293,102854374,102856112,102858418,102861714,102863103,102866381,102866845,102868257,102872398,102873343,102875983	Gene ID= ENSG00000134899.18 TPM= 5.64 Transcript Type= NA
chr13	106489731	106535659	106489731	106535659	-	transcript1892.chr13.nnic@EFNB2	transcript1892.chr13.nnic	protein_coding	106534843,106512529,106494881,106489731	106535659,106512812,106494994,106493428	Gene ID= ENSG00000125266.6 TPM= 8.17 Transcript Type= NA
chr13	106489731	106535114	106489731	106535114	-	ENST00000245323.4@EFNB2	ENST00000245323.4	protein_coding	106534843,106512529,106495748,106494881,106489731	106535114,106512812,106495840,106494994,106493428	Gene ID= ENSG00000125266.6 TPM= 54.88 Transcript Type= protein_coding
chr13	106543327	106568173	106543327	106568173	-	transcript1895.chr13.nic@ARGLU1	transcript1895.chr13.nic	protein_coding	106567573,106559432,106557559,106557048,106543327	106568173,106559657,106557616,106557131,106544160	Gene ID= ENSG00000134884.13 TPM= 6.62 Transcript Type= NA
chr13	106543327	106562040	106543327	106562040	-	transcript1906.chr13.nic@ARGLU1	transcript1906.chr13.nic	protein_coding	106561832,106557048,106543327	106562040,106559657,106544160	Gene ID= ENSG00000134884.13 TPM= 18.1 Transcript Type= NA
chr13	106543327	106568173	106543327	106568173	-	transcript1907.chr13.nic@ARGLU1	transcript1907.chr13.nic	protein_coding	106567573,106557048,106543327	106568173,106559657,106544160	Gene ID= ENSG00000134884.13 TPM= 182.73 Transcript Type= NA
chr13	106541673	106568164	106541673	106568164	-	ENST00000400198.7@ARGLU1	ENST00000400198.7	protein_coding	106567573,106559432,106557048,106541673	106568164,106559657,106557131,106544160	Gene ID= ENSG00000134884.13 TPM= 7.01 Transcript Type= protein_coding
chr13	107163510	107866735	107163510	107866735	-	ENST00000375915.3@FAM155A	ENST00000375915.3	protein_coding	107865682,107210584,107163510	107866735,107210755,107170786	Gene ID= ENSG00000204442.3 TPM= 2.34 Transcript Type= protein_coding
chr13	108207442	108218349	108207442	108218349	-	transcript1917.chr13.nnic@LIG4	transcript1917.chr13.nnic	protein_coding	108218162,108215484,108214562,108207442	108218349,108215743,108214718,108211296	Gene ID= ENSG00000174405.13 TPM= 3.12 Transcript Type= NA
chr13	108207439	108218368	108207439	108218368	-	ENST00000405925.2@LIG4	ENST00000405925.2	protein_coding	108218162,108207439	108218368,108211296	Gene ID= ENSG00000174405.13 TPM= 3.12 Transcript Type= protein_coding
chr13	108207439	108215534	108207439	108215534	-	ENST00000442234.5@LIG4	ENST00000442234.5	protein_coding	108215484,108214538,108207439	108215534,108214610,108211296	Gene ID= ENSG00000174405.13 TPM= 8.96 Transcript Type= protein_coding
chr13	108218379	108234255	108218379	108234255	+	ENST00000375898.3@ABHD13	ENST00000375898.3	protein_coding	108218379,108229199	108218659,108234255	Gene ID= ENSG00000139826.5 TPM= 5.84 Transcript Type= protein_coding
chr13	108269718	108308484	108269718	108308484	+	ENST00000375887.8@TNFSF13B	ENST00000375887.8	protein_coding	108269718,108270340,108286803,108303253,108303454,108306826	108270234,108270424,108286859,108303365,108303604,108308484	Gene ID= ENSG00000102524.11 TPM= 8.17 Transcript Type= protein_coding
chr13	108270266	108307033	108270266	108307033	+	transcript1934.chr13.nic@TNFSF13B	transcript1934.chr13.nic	protein_coding	108270266,108286803,108303253,108303454,108306826	108270424,108286859,108303365,108303604,108307033	Gene ID= ENSG00000102524.11 TPM= 2.34 Transcript Type= NA
chr13	109729942	109732156	109729942	109732156	-	transcript1940.chr13.nnic@NA	transcript1940.chr13.nnic	NA	109729942	109732156	Gene ID= novel_gene_chr13_1941 TPM= 2.34 Transcript Type= NA
chr13	109752698	109786568	109752698	109786568	-	ENST00000375856.4@IRS2	ENST00000375856.4	protein_coding	109782042,109752698	109786568,109756308	Gene ID= ENSG00000185950.8 TPM= 25.69 Transcript Type= protein_coding
chr13	110148963	110307149	110148963	110307149	-	ENST00000375820.8@COL4A1	ENST00000375820.8	protein_coding	110306944,110242675,110213926,110213782,110212574,110212417,110211869,110211647,110210129,110209980,110209392,110208849,110207403,110206865,110206665,110205494,110205353,110203566,110201438,110200854,110198467,110195023,110192830,110192214,110187138,110186385,110183184,110182993,110181292,110179271,110178923,110178064,110177842,110176885,110176626,110176424,110175218,110174623,110174446,110173900,110172720,110170547,110169629,110167158,110166232,110164862,110163463,110162230,110161192,110155283,110152334,110148963	110307149,110242734,110214015,110213826,110212618,110212479,110211922,110211673,110210212,110210042,110209427,110208890,110207489,110206891,110206715,110205538,110205406,110203607,110201522,110200889,110198631,110195118,110192913,110192284,110187329,110186553,110183276,110183097,110181389,110179421,110179036,110178231,110177931,110177037,110176724,110176513,110175357,110174749,110174526,110173998,110172770,110170732,110169762,110167230,110166303,110164990,110163561,110162442,110161369,110155397,110152506,110150444	Gene ID= ENSG00000187498.14 TPM= 142.45 Transcript Type= protein_coding
chr13	110307267	110513027	110307267	110513027	+	ENST00000360467.5@COL4A2	ENST00000360467.5	protein_coding	110307267,110307860,110308069,110357472,110424734,110424953,110428467,110429885,110430401,110430545,110432325,110434401,110436269,110438002,110438618,110439789,110445829,110446798,110449679,110450305,110457343,110458771,110462114,110462278,110465405,110466003,110467040,110469217,110472929,110478003,110480220,110482516,110484905,110485655,110489445,110489711,110491233,110492070,110493211,110495342,110501668,110503121,110503383,110503847,110504148,110506415,110507935,110511934	110307528,110307947,110308123,110357552,110424868,110424997,110428583,110429956,110430436,110430607,110432360,110434442,110436367,110438037,110438668,110439833,110445882,110446864,110449789,110450454,110457435,110458934,110462186,110462384,110465606,110466062,110467096,110469324,110473150,110478164,110480390,110482659,110485027,110485836,110489508,110489785,110491340,110492177,110493282,110495467,110501784,110503282,110503481,110503993,110504264,110506606,110508221,110513027	Gene ID= ENSG00000134871.17 TPM= 630.5 Transcript Type= protein_coding
chr13	110523066	110561733	110523066	110561733	-	ENST00000267328.4@RAB20	ENST00000267328.4	protein_coding	110561348,110523066	110561733,110524197	Gene ID= ENSG00000139832.4 TPM= 156.46 Transcript Type= protein_coding
chr13	110615505	110639993	110615505	110639993	+	transcript2004.chr13.nic@NAXD	transcript2004.chr13.nic	protein_coding	110615505,110622216,110624234,110625190,110627439,110634545,110634672,110635468,110637129,110638242	110615647,110622366,110624279,110625278,110627547,110634595,110634776,110635588,110637249,110639993	Gene ID= ENSG00000213995.11 TPM= 9 Transcript Type= NA
chr13	110615505	110639993	110615505	110639993	+	transcript2005.chr13.nic@NAXD	transcript2005.chr13.nic	protein_coding	110615505,110622216,110624234,110625190,110627439,110634545,110634672,110635468,110637129,110638378	110615647,110622366,110624279,110625278,110627547,110634595,110634776,110635588,110637249,110639993	Gene ID= ENSG00000213995.11 TPM= 70.44 Transcript Type= NA
chr13	110615579	110639993	110615579	110639993	+	transcript2006.chr13.nic@NAXD	transcript2006.chr13.nic	protein_coding	110615579,110622216,110624234,110625190,110627439,110634545,110634672,110635468,110637129,110638378	110615774,110622366,110624279,110625278,110627547,110634595,110634776,110635588,110637249,110639993	Gene ID= ENSG00000213995.11 TPM= 10.89 Transcript Type= NA
chr13	110615505	110639996	110615505	110639996	+	transcript2008.chr13.nic@NAXD	transcript2008.chr13.nic	protein_coding	110615505,110622216,110624234,110625190,110627439,110634545,110634672,110635468,110637129	110615647,110622366,110624279,110625278,110627547,110634595,110634776,110635588,110639996	Gene ID= ENSG00000213995.11 TPM= 5.25 Transcript Type= NA
chr13	110615650	110639993	110615650	110639993	+	transcript2012.chr13.nic@NAXD	transcript2012.chr13.nic	protein_coding	110615650,110622216,110624234,110625190,110627439,110634545,110635468,110637129,110638378	110615774,110622366,110624279,110625278,110627547,110634776,110635588,110637249,110639993	Gene ID= ENSG00000213995.11 TPM= 6.22 Transcript Type= NA
chr13	110615505	110639993	110615505	110639993	+	transcript2017.chr13.nic@NAXD	transcript2017.chr13.nic	protein_coding	110615505,110622216,110624234,110625190,110627439,110634545,110637129,110638378	110615647,110622366,110624279,110625278,110627547,110635588,110637249,110639993	Gene ID= ENSG00000213995.11 TPM= 7.01 Transcript Type= NA
chr13	110615460	110639993	110615460	110639993	+	ENST00000424185.6@NAXD	ENST00000424185.6	protein_coding	110615460,110627439,110634545,110634672,110635468,110637129,110638378	110615647,110627547,110634595,110634776,110635588,110637249,110639993	Gene ID= ENSG00000213995.11 TPM= 5.06 Transcript Type= protein_coding
chr13	110641417	110706106	110641417	110706106	-	transcript1986.chr13.nic@CARS2	transcript1986.chr13.nic	protein_coding	110705870,110705521,110701438,110687947,110687721,110683051,110676974,110667340,110663451,110651034,110647101,110645967,110644385,110644065,110642315,110641417	110706106,110705571,110701555,110688018,110687826,110683134,110677103,110667473,110663518,110651100,110647239,110646090,110644483,110644182,110642521,110641608	Gene ID= ENSG00000134905.16 TPM= 4.72 Transcript Type= NA
chr13	110641417	110706106	110641417	110706106	-	transcript1987.chr13.nic@CARS2	transcript1987.chr13.nic	protein_coding	110705870,110705521,110701438,110697918,110687947,110687721,110683051,110676974,110667340,110663451,110651034,110645967,110644385,110644065,110642315,110641417	110706106,110705571,110701555,110697967,110688018,110687826,110683134,110677103,110667473,110663518,110651100,110647239,110644483,110644182,110642521,110641608	Gene ID= ENSG00000134905.16 TPM= 3.36 Transcript Type= NA
chr13	110641417	110706098	110641417	110706098	-	transcript1989.chr13.nic@CARS2	transcript1989.chr13.nic	protein_coding	110705870,110705521,110701438,110697918,110687947,110687721,110683051,110676974,110667340,110663451,110651034,110647101,110645967,110644385,110642315,110641417	110706098,110705571,110701555,110697967,110688018,110687826,110683134,110677103,110667473,110663518,110651100,110647239,110646090,110644483,110642521,110641608	Gene ID= ENSG00000134905.16 TPM= 3.55 Transcript Type= NA
chr13	110641417	110706164	110641417	110706164	-	transcript1991.chr13.nic@CARS2	transcript1991.chr13.nic	protein_coding	110705870,110705521,110701438,110687947,110687721,110683051,110676974,110667340,110663451,110651034,110645967,110644385,110644065,110642315,110641417	110706164,110705571,110701555,110688018,110687826,110683134,110677103,110667473,110663518,110651100,110647239,110644483,110644182,110642521,110641608	Gene ID= ENSG00000134905.16 TPM= 3.36 Transcript Type= NA
chr13	110641417	110706095	110641417	110706095	-	transcript1993.chr13.nic@CARS2	transcript1993.chr13.nic	protein_coding	110705870,110705521,110701438,110687947,110687721,110683051,110676974,110667340,110663451,110651034,110647101,110645967,110644385,110642315,110641417	110706095,110705571,110701555,110688018,110687826,110683134,110677103,110667473,110663518,110651100,110647239,110646090,110644483,110644182,110641608	Gene ID= ENSG00000134905.16 TPM= 3.95 Transcript Type= NA
chr13	110641417	110706164	110641417	110706164	-	transcript1997.chr13.nic@CARS2	transcript1997.chr13.nic	protein_coding	110705870,110705521,110701438,110687947,110687721,110683051,110676974,110667340,110663451,110651034,110645967,110644385,110642315,110641417	110706164,110705571,110701555,110688018,110687826,110683134,110677103,110667473,110663518,110651100,110647239,110644483,110642521,110641608	Gene ID= ENSG00000134905.16 TPM= 8.62 Transcript Type= NA
chr13	110641417	110706108	110641417	110706108	-	transcript2002.chr13.nnic@CARS2	transcript2002.chr13.nnic	protein_coding	110705870,110705521,110701438,110687947,110683051,110676974,110667340,110663451,110645967,110644385,110642315,110641417	110706108,110705571,110701555,110688018,110683134,110677103,110667473,110663518,110647239,110644483,110644182,110641608	Gene ID= ENSG00000134905.16 TPM= 3.95 Transcript Type= NA
chr13	110641417	110706157	110641417	110706157	-	ENST00000257347.8@CARS2	ENST00000257347.8	protein_coding	110705870,110705521,110701438,110687947,110687721,110683051,110676974,110667340,110663451,110651034,110647101,110645967,110644385,110642315,110641417	110706157,110705571,110701555,110688018,110687826,110683134,110677103,110667473,110663518,110651100,110647239,110646090,110644483,110642521,110641608	Gene ID= ENSG00000134905.16 TPM= 61.93 Transcript Type= protein_coding
chr13	110710462	110713031	110710462	110713031	-	transcript2044.chr13.nnic@NA	transcript2044.chr13.nnic	NA	110710462	110713031	Gene ID= novel_gene_chr13_2045 TPM= 2.34 Transcript Type= NA
chr13	110714982	110721071	110714982	110721071	+	ENST00000375774.3@ING1	ENST00000375774.3	protein_coding	110714982,110719229	110716008,110721071	Gene ID= ENSG00000153487.12 TPM= 3.5 Transcript Type= protein_coding
chr13	110878540	110914554	110878540	110914554	-	transcript2048.chr13.nnic@ANKRD10	transcript2048.chr13.nnic	protein_coding	110914508,110911654,110910618,110906033,110904745,110894109,110893028,110883698,110878540	110914554,110911771,110910770,110906124,110904780,110894202,110893263,110883793,110880112	Gene ID= ENSG00000088448.14 TPM= 3.27 Transcript Type= NA
chr13	110878540	110915071	110878540	110915071	-	transcript2055.chr13.nic@ANKRD10	transcript2055.chr13.nic	protein_coding	110914725,110910618,110906033,110900530,110893028,110883698,110878540	110915071,110910770,110906124,110900661,110893263,110883793,110880112	Gene ID= ENSG00000088448.14 TPM= 3.27 Transcript Type= NA
chr13	110878540	110915071	110878540	110915071	-	transcript2056.chr13.nic@ANKRD10	transcript2056.chr13.nic	protein_coding	110914725,110910618,110906033,110900530,110893028,110883698,110878540	110915071,110910770,110906124,110900694,110893263,110883793,110880112	Gene ID= ENSG00000088448.14 TPM= 4.44 Transcript Type= NA
chr13	110878540	110915071	110878540	110915071	-	transcript2059.chr13.nnic@ANKRD10	transcript2059.chr13.nnic	protein_coding	110914725,110910618,110906033,110893028,110883698,110878540	110915071,110910770,110906124,110893098,110883793,110880112	Gene ID= ENSG00000088448.14 TPM= 4.44 Transcript Type= NA
chr13	110878540	110915069	110878540	110915069	-	ENST00000267339.6@ANKRD10	ENST00000267339.6	protein_coding	110914725,110910618,110906033,110893028,110883698,110878540	110915069,110910770,110906124,110893263,110883793,110880112	Gene ID= ENSG00000088448.14 TPM= 46.47 Transcript Type= protein_coding
chr13	110878543	110915071	110878543	110915071	-	transcript2066.chr13.nic@ANKRD10	transcript2066.chr13.nic	protein_coding	110914725,110910618,110906033,110893028,110878543	110915071,110910770,110906124,110893263,110883793	Gene ID= ENSG00000088448.14 TPM= 7.59 Transcript Type= NA
chr13	110892696	110915071	110892696	110915071	-	transcript2074.chr13.nic@ANKRD10	transcript2074.chr13.nic	protein_coding	110914725,110910618,110906033,110892696	110915071,110910770,110906124,110893263	Gene ID= ENSG00000088448.14 TPM= 2.34 Transcript Type= NA
chr13	110898751	110915071	110898751	110915071	-	transcript2076.chr13.nnic@ANKRD10	transcript2076.chr13.nnic	protein_coding	110914725,110910618,110903485,110898751	110915071,110910770,110906124,110901325	Gene ID= ENSG00000088448.14 TPM= 8.17 Transcript Type= NA
chr13	110878543	110894427	110878543	110894427	-	transcript2078.chr13.nic@ANKRD10	transcript2078.chr13.nic	protein_coding	110894109,110893028,110878543	110894427,110893263,110883793	Gene ID= ENSG00000088448.14 TPM= 12.26 Transcript Type= NA
chr13	110892692	110915006	110892692	110915006	-	ENST00000310847.8@ANKRD10	ENST00000310847.8	protein_coding	110914725,110910618,110906033,110894109,110892692	110915006,110910770,110906124,110894202,110893263	Gene ID= ENSG00000088448.14 TPM= 3.5 Transcript Type= protein_coding
chr13	111153660	111303446	111153660	111303446	+	transcript2086.chr13.nic@ARHGEF7	transcript2086.chr13.nic	protein_coding	111153660,111153905,111205289,111209872,111217679,111233205,111243872,111244199,111267548,111273814,111274731,111275532,111277587,111280272,111280538,111283139,111286147,111288354,111300748,111301478,111302991	111153721,111153991,111205373,111210002,111217880,111233293,111243966,111244294,111267670,111273952,111274790,111275678,111277673,111280350,111280677,111283363,111286240,111288443,111300847,111301532,111303446	Gene ID= ENSG00000102606.17 TPM= 4.67 Transcript Type= NA
chr13	111153660	111156102	111153660	111156102	+	transcript2095.chr13.nic@ARHGEF7	transcript2095.chr13.nic	protein_coding	111153660,111153905	111153721,111156102	Gene ID= ENSG00000102606.17 TPM= 3.5 Transcript Type= NA
chr13	112485005	112588167	112485005	112588167	-	ENST00000261965.7@TUBGCP3	ENST00000261965.7	protein_coding	112587905,112569152,112565111,112559322,112558196,112556052,112554887,112554057,112548108,112547620,112545699,112527374,112526942,112522320,112519886,112518975,112516440,112504626,112504032,112499045,112489581,112485005	112588167,112569259,112565178,112559399,112558413,112556224,112555005,112554182,112548176,112547752,112545865,112527484,112527050,112522509,112520021,112519043,112516575,112504714,112504163,112499185,112489697,112486151	Gene ID= ENSG00000126216.13 TPM= 29.77 Transcript Type= protein_coding
chr13	112544556	112588154	112544556	112588154	-	transcript2106.chr13.nic@TUBGCP3	transcript2106.chr13.nic	protein_coding	112587905,112569152,112565111,112559322,112558196,112556052,112554887,112554057,112548108,112547620,112544556	112588154,112569259,112565178,112559399,112558413,112556224,112555005,112554182,112548176,112547752,112545865	Gene ID= ENSG00000126216.13 TPM= 2.92 Transcript Type= NA
chr13	112546482	112588135	112546482	112588135	-	ENST00000464139.5@TUBGCP3	ENST00000464139.5	protein_coding	112587905,112569152,112565111,112559322,112558196,112556052,112554887,112554057,112548108,112546482	112588135,112569259,112565178,112559399,112558413,112556224,112555005,112554182,112548176,112547752	Gene ID= ENSG00000126216.13 TPM= 8.17 Transcript Type= protein_coding
chr13	112688296	112689799	112688296	112689799	-	transcript2115.chr13.nnic@AL139384.1	transcript2115.chr13.nnic	lincRNA	112689645,112688296	112689799,112688869	Gene ID= ENSG00000274922.1 TPM= 2.34 Transcript Type= NA
chr13	112686769	112689815	112686769	112689815	-	ENST00000612143.1@AL139384.1	ENST00000612143.1	lincRNA	112686769	112689815	Gene ID= ENSG00000274922.1 TPM= 1.17 Transcript Type= lincRNA
chr13	112690003	112860798	112690003	112860798	+	transcript2112.chr13.nic@ATP11A	transcript2112.chr13.nic	protein_coding	112690003,112785135,112804957,112806213,112810619,112816083,112819304,112819900,112823345,112824344,112825430,112826694,112831375,112832860,112834589,112836178,112842276,112851037,112854279,112855911,112857818,112858145,112859393,112860287	112690455,112785257,112805046,112806293,112810726,112816211,112819407,112819950,112823409,112824425,112825580,112826891,112831548,112833023,112834660,112836251,112842379,112851218,112854530,112856085,112857920,112858290,112859452,112860798	Gene ID= ENSG00000068650.18 TPM= 7.59 Transcript Type= NA
chr13	112690003	112856364	112690003	112856364	+	transcript2113.chr13.nic@ATP11A	transcript2113.chr13.nic	protein_coding	112690003,112785135,112804957,112806213,112810619,112816083,112819304,112819900,112823345,112824344,112825430,112826694,112831375,112832860,112834589,112836178,112842276,112851037,112854279,112855911	112690455,112785257,112805046,112806293,112810726,112816211,112819407,112819950,112823409,112824425,112825580,112826891,112831548,112833023,112834660,112836251,112842379,112851218,112854530,112856364	Gene ID= ENSG00000068650.18 TPM= 7.59 Transcript Type= NA
chr13	112691409	112696091	112691409	112696091	-	transcript2135.chr13.nnic@NA	transcript2135.chr13.nnic	NA	112691409	112696091	Gene ID= novel_gene_chr13_2136 TPM= 3.5 Transcript Type= NA
chr13	112707308	112709768	112707308	112709768	-	transcript2131.chr13.nnic@NA	transcript2131.chr13.nnic	NA	112707308	112709768	Gene ID= novel_gene_chr13_2132 TPM= 2.34 Transcript Type= NA
chr13	112718673	112721245	112718673	112721245	-	transcript2127.chr13.nnic@NA	transcript2127.chr13.nnic	NA	112718673	112721245	Gene ID= novel_gene_chr13_2128 TPM= 3.5 Transcript Type= NA
chr13	112725174	112727558	112725174	112727558	+	transcript2119.chr13.nnic@NA	transcript2119.chr13.nnic	NA	112725174	112727558	Gene ID= novel_gene_chr13_2120 TPM= 2.34 Transcript Type= NA
chr13	112806675	112806994	112806675	112806994	-	transcript2125.chr13.nnic@NA	transcript2125.chr13.nnic	NA	112806675	112806994	Gene ID= novel_gene_chr13_2126 TPM= 5.84 Transcript Type= NA
chr13	112811055	112814572	112811055	112814572	-	transcript2129.chr13.nnic@NA	transcript2129.chr13.nnic	NA	112811055	112814572	Gene ID= novel_gene_chr13_2130 TPM= 4.67 Transcript Type= NA
chr13	112881971	112887002	112881971	112887002	+	transcript2117.chr13.nnic@NA	transcript2117.chr13.nnic	NA	112881971	112887002	Gene ID= novel_gene_chr13_2118 TPM= 40.87 Transcript Type= NA
chr13	112979237	113098548	112979237	113098548	+	transcript2141.chr13.nic@MCF2L	transcript2141.chr13.nic	protein_coding	112979237,113014763,113024644,113045271,113060593,113064304,113064936,113066046,113070059,113074444,113074998,113075966,113077052,113078363,113078666,113081213,113082427,113083998,113084892,113085086,113086124,113087235,113087707,113088327,113088562,113089610,113094514,113096371,113096550,113096774	112979758,113014846,113024758,113045361,113060712,113064420,113065085,113066170,113070173,113074563,113075189,113076157,113077211,113078436,113078739,113081279,113082542,113084067,113084984,113085178,113086249,113087456,113087799,113088405,113088628,113089728,113094635,113096483,113096653,113098548	Gene ID= ENSG00000126217.20 TPM= 17.51 Transcript Type= NA
chr13	113093180	113098546	113093180	113098546	+	transcript2146.chr13.nic@MCF2L	transcript2146.chr13.nic	protein_coding	113093180,113096371,113096550	113094635,113096483,113098546	Gene ID= ENSG00000126217.20 TPM= 12.84 Transcript Type= NA
chr13	112967489	112969137	112967489	112969137	-	transcript2151.chr13.nnic@NA	transcript2151.chr13.nnic	NA	112967489	112969137	Gene ID= novel_gene_chr13_2152 TPM= 2.34 Transcript Type= NA
chr13	113092213	113098548	113092213	113098548	+	transcript2149.chr13.nnic@NA	transcript2149.chr13.nnic	NA	113092213	113098548	Gene ID= novel_gene_chr13_2150 TPM= 8.17 Transcript Type= NA
chr13	113122818	113149529	113122818	113149529	+	ENST00000375559.7@F10	ENST00000375559.7	protein_coding	113122818,113129452,113138457,113139357,113140919,113143851,113147379,113148916	113122925,113129612,113138481,113139470,113141050,113144095,113147496,113149529	Gene ID= ENSG00000126218.11 TPM= 16.35 Transcript Type= protein_coding
chr13	113177611	113208715	113177611	113208715	-	ENST00000375479.6@PCID2	ENST00000375479.6	protein_coding	113208599,113200427,113198191,113197178,113196181,113195071,113190872,113185485,113184346,113181130,113180158,113179917,113178966,113178174,113177611	113208715,113200516,113198264,113197243,113196222,113195125,113190975,113185560,113184487,113181230,113180231,113180042,113179089,113178287,113177976	Gene ID= ENSG00000126226.21 TPM= 10.51 Transcript Type= protein_coding
chr13	113177577	113208711	113177577	113208711	-	ENST00000337344.8@PCID2	ENST00000337344.8	protein_coding	113208599,113200427,113198191,113197178,113196181,113195071,113190872,113185485,113184346,113181130,113180158,113179917,113178966,113177577	113208711,113200516,113198264,113197243,113196222,113195125,113190975,113185560,113184487,113181230,113180231,113180042,113179089,113178287	Gene ID= ENSG00000126226.21 TPM= 39.7 Transcript Type= protein_coding
chr13	113181591	113208693	113181591	113208693	-	transcript2190.chr13.nnic@PCID2	transcript2190.chr13.nnic	protein_coding	113208599,113200427,113198191,113197178,113196181,113195071,113190872,113185485,113184346,113181591	113208693,113200516,113198264,113197243,113196222,113195125,113190975,113185560,113184487,113184028	Gene ID= ENSG00000126226.21 TPM= 2.34 Transcript Type= NA
chr13	113177611	113208666	113177611	113208666	-	ENST00000375477.5@PCID2	ENST00000375477.5	protein_coding	113208599,113200427,113198191,113197178,113196181,113195071,113190872,113185485,113184346,113181130,113180158,113179917,113178966,113178174,113177611	113208666,113200516,113198264,113197243,113196222,113195125,113190975,113185560,113184487,113181230,113180231,113180042,113179089,113178287,113178008	Gene ID= ENSG00000126226.21 TPM= 10.51 Transcript Type= protein_coding
chr13	113177617	113208650	113177617	113208650	-	ENST00000375457.2@PCID2	ENST00000375457.2	protein_coding	113208024,113200427,113198191,113197178,113196181,113195071,113190872,113185485,113184346,113181130,113180158,113179917,113178966,113177617	113208650,113200516,113198264,113197243,113196222,113195125,113190975,113185560,113184487,113181230,113180231,113180042,113179089,113178287	Gene ID= ENSG00000126226.21 TPM= 4.67 Transcript Type= protein_coding
chr13	113208193	113265072	113208193	113265072	+	ENST00000375441.7@CUL4A	ENST00000375441.7	protein_coding	113208193,113209973,113218945,113227976,113229446,113233177,113233897,113235063,113236823,113239433,113242968,113244410,113244949,113245152,113245956,113253082,113254693,113254953,113260607,113263487	113208607,113210088,113219048,113228045,113229519,113233339,113233986,113235145,113236890,113239551,113243160,113244514,113245059,113245237,113246063,113253195,113254798,113255125,113260759,113265072	Gene ID= ENSG00000139842.14 TPM= 11.29 Transcript Type= protein_coding
chr13	113297241	113323672	113297241	113323672	+	ENST00000332556.4@LAMP1	ENST00000332556.4	protein_coding	113297241,113306485,113309643,113310709,113319469,113320345,113321404,113321557,113322282	113297495,113306606,113309862,113310867,113319656,113320470,113321470,113321727,113323672	Gene ID= ENSG00000185896.10 TPM= 98.08 Transcript Type= protein_coding
chr13	113358684	113364155	113358684	113364155	-	transcript2235.chr13.nic@GRTP1	transcript2235.chr13.nic	protein_coding	113364020,113363762,113358684	113364155,113363910,113360284	Gene ID= ENSG00000139835.13 TPM= 2.34 Transcript Type= NA
chr13	113324190	113364126	113324190	113364126	-	ENST00000375431.8@GRTP1	ENST00000375431.8	protein_coding	113364020,113363762,113355323,113350849,113344863,113325919,113325661,113324190	113364126,113363910,113355481,113350973,113344959,113326091,113325846,113324577	Gene ID= ENSG00000139835.13 TPM= 1.17 Transcript Type= protein_coding
chr13	113490718	113550195	113490718	113550195	+	transcript2249.chr13.nnic@TMCO3	transcript2249.chr13.nnic	protein_coding	113490718,113495502,113498342,113499958,113501752,113503496,113510238,113520616,113534045,113539357,113548303,113549425	113491273,113496025,113498521,113500149,113501880,113503588,113510424,113520733,113534240,113539507,113548452,113550195	Gene ID= ENSG00000150403.17 TPM= 16.35 Transcript Type= NA
chr13	113490887	113550195	113490887	113550195	+	transcript2255.chr13.nnic@TMCO3	transcript2255.chr13.nnic	protein_coding	113490887,113495502,113498342,113501752,113503496,113510238,113520616,113534045,113539357,113547300,113548303,113549425	113491273,113496025,113498521,113501880,113503588,113510424,113520733,113534240,113539507,113547379,113548452,113550195	Gene ID= ENSG00000150403.17 TPM= 8.17 Transcript Type= NA
chr13	113490995	113550195	113490995	113550195	+	ENST00000434316.6@TMCO3	ENST00000434316.6	protein_coding	113490995,113495502,113498342,113499958,113501752,113503496,113510238,113520616,113534045,113539357,113547300,113548303,113549425	113491273,113496025,113498521,113500149,113501880,113503588,113510424,113520733,113534240,113539507,113547379,113548452,113550195	Gene ID= ENSG00000150403.17 TPM= 130.77 Transcript Type= protein_coding
chr13	113491096	113535286	113491096	113535286	+	ENST00000474393.5@TMCO3	ENST00000474393.5	protein_coding	113491096,113495502,113498342,113499958,113501752,113503496,113510238,113520616,113534045	113491273,113496025,113498521,113500149,113501880,113503588,113510424,113520733,113535286	Gene ID= ENSG00000150403.17 TPM= 10.51 Transcript Type= protein_coding
chr13	113584591	113641470	113584591	113641470	+	transcript2283.chr13.nnic@TFDP1	transcript2283.chr13.nnic	protein_coding	113584591,113585774,113610996,113623180,113631623,113633120,113633890,113634534,113635977,113636534,113637818,113640120	113584730,113585849,113611062,113623286,113631744,113633285,113634033,113634602,113636128,113636700,113637896,113641470	Gene ID= ENSG00000198176.12 TPM= 4.67 Transcript Type= NA
chr13	113584698	113641470	113584698	113641470	+	transcript2287.chr13.nnic@TFDP1	transcript2287.chr13.nnic	protein_coding	113584698,113585774,113610996,113623180,113631623,113633120,113633890,113634534,113635977,113636534,113637818,113640120	113584888,113585849,113611062,113623286,113631744,113633285,113634033,113634602,113636128,113636700,113637884,113641470	Gene ID= ENSG00000198176.12 TPM= 9.34 Transcript Type= NA
chr13	113584699	113641470	113584699	113641470	+	transcript2293.chr13.nnic@TFDP1	transcript2293.chr13.nnic	protein_coding	113584699,113585774,113610996,113623180,113631623,113633120,113633890,113634534,113635977,113636534,113637818,113640120	113585427,113585849,113611062,113623286,113631744,113633285,113634033,113634602,113636128,113636700,113637884,113641470	Gene ID= ENSG00000198176.12 TPM= 3.5 Transcript Type= NA
chr13	113584698	113641470	113584698	113641470	+	transcript2303.chr13.nnic@TFDP1	transcript2303.chr13.nnic	protein_coding	113584698,113585774,113610996,113623180,113631623,113633120,113633890,113634534,113635977,113636534,113640120	113584888,113585849,113611062,113623286,113631744,113633285,113634033,113634602,113636128,113636700,113641470	Gene ID= ENSG00000198176.12 TPM= 8.76 Transcript Type= NA
chr13	113584698	113641470	113584698	113641470	+	transcript2305.chr13.nnic@TFDP1	transcript2305.chr13.nnic	protein_coding	113584698,113585774,113610996,113623180,113633120,113633890,113634534,113635977,113636534,113637818,113640120	113584888,113585849,113611062,113623286,113633285,113634033,113634602,113636128,113636700,113637884,113641470	Gene ID= ENSG00000198176.12 TPM= 4.67 Transcript Type= NA
chr13	113584759	113641470	113584759	113641470	+	transcript2316.chr13.nnic@TFDP1	transcript2316.chr13.nnic	protein_coding	113584759,113585774,113610996,113623180,113633120,113633890,113634534,113635977,113636534,113640120	113585427,113585849,113611062,113623286,113633285,113634033,113634602,113636128,113636700,113641470	Gene ID= ENSG00000198176.12 TPM= 4.09 Transcript Type= NA
chr13	113584741	113641470	113584741	113641470	+	ENST00000375370.9@TFDP1	ENST00000375370.9	protein_coding	113584741,113585774,113610996,113623180,113631623,113633120,113633890,113634534,113635977,113636534,113637818,113640120	113584888,113585849,113611062,113623286,113631744,113633285,113634033,113634602,113636128,113636700,113637896,113641470	Gene ID= ENSG00000198176.12 TPM= 70.06 Transcript Type= protein_coding
chr13	113584733	113586180	113584733	113586180	+	ENST00000464794.5@TFDP1	ENST00000464794.5	protein_coding	113584733,113585774,113585966	113584888,113585849,113586180	Gene ID= ENSG00000198176.12 TPM= 2.34 Transcript Type= processed_transcript
chr13	113584708	113586163	113584708	113586163	+	transcript2322.chr13.nnic@NA	transcript2322.chr13.nnic	NA	113584708	113586163	Gene ID= novel_gene_chr13_2323 TPM= 2.34 Transcript Type= NA
chr13	113757553	113759149	113757553	113759149	-	transcript2324.chr13.nnic@NA	transcript2324.chr13.nnic	NA	113757553	113759149	Gene ID= novel_gene_chr13_2325 TPM= 2.34 Transcript Type= NA
chr13	113759195	113812243	113759195	113812243	+	transcript2362.chr13.nnic@TMEM255B	transcript2362.chr13.nnic	protein_coding	113759195,113766115,113769098,113795148,113799339,113799971,113800827,113801653,113804885,113811736	113759315,113766257,113769160,113795237,113799419,113800063,113800912,113801812,113805028,113812243	Gene ID= ENSG00000184497.12 TPM= 4.09 Transcript Type= NA
chr13	113759195	113812243	113759195	113812243	+	transcript2368.chr13.nic@TMEM255B	transcript2368.chr13.nic	protein_coding	113759195,113766115,113769098,113795148,113799339,113799818,113801653,113804885,113811736	113759315,113766257,113769160,113795237,113799419,113800912,113801812,113805028,113812243	Gene ID= ENSG00000184497.12 TPM= 7.01 Transcript Type= NA
chr13	113759240	113799660	113759240	113799660	+	ENST00000488362.5@TMEM255B	ENST00000488362.5	protein_coding	113759240,113766115,113769098,113795148,113799339	113759315,113766257,113769160,113795237,113799660	Gene ID= ENSG00000184497.12 TPM= 3.5 Transcript Type= protein_coding
chr13	113759243	113816995	113759243	113816995	+	ENST00000375353.4@TMEM255B	ENST00000375353.4	protein_coding	113759243,113766115,113769098,113795148,113799339,113800827,113801653,113804885,113811736	113759315,113766257,113769160,113795237,113799419,113800912,113801812,113805028,113816995	Gene ID= ENSG00000184497.12 TPM= 9.34 Transcript Type= protein_coding
chr13	113815630	113845744	113815630	113845744	+	ENST00000458001.2@GAS6-AS1	ENST00000458001.2	antisense_RNA	113815630,113833492,113834578,113838077,113839084	113815691,113833579,113834764,113838247,113845744	Gene ID= ENSG00000233695.2 TPM= 3.5 Transcript Type= antisense_RNA
chr13	113820549	113823194	113820549	113823194	-	ENST00000608763.1@GAS6	ENST00000608763.1	protein_coding	113820549	113823194	Gene ID= ENSG00000183087.14 TPM= 37.78 Transcript Type= retained_intron
chr13	113820558	113864067	113820558	113864067	-	ENST00000327773.6@GAS6	ENST00000327773.6	protein_coding	113863833,113863575,113848026,113846527,113839728,113838069,113835513,113834551,113832634,113832299,113828547,113826996,113823375,113821958,113820558	113864067,113863741,113848050,113846589,113839850,113838191,113835635,113834672,113832752,113832488,113828711,113827164,113823550,113822186,113821018	Gene ID= ENSG00000183087.14 TPM= 1283.09 Transcript Type= protein_coding
chr13	113949542	113955063	113949542	113955063	-	transcript2398.chr13.nnic@FP565324.1	transcript2398.chr13.nnic	protein_coding	113952355,113949542	113955063,113952320	Gene ID= ENSG00000283199.1 TPM= 7.01 Transcript Type= NA
chr13	113977783	114132611	113977783	114132611	-	ENST00000334062.7@RASA3	ENST00000334062.7	protein_coding	114132435,114073720,114052052,114041000,114029811,114027847,114027389,114024279,114021404,114018763,114018104,114017237,114016197,114015209,114013142,114011171,114009387,114007533,114000826,113999585,113996531,113992485,113981675,113977783	114132611,114073837,114052155,114041094,114029887,114027927,114027461,114024355,114021508,114018919,114018252,114017351,114016271,114015332,114013248,114011248,114009464,114007606,114000932,113999667,113996739,113992588,113981858,113979422	Gene ID= ENSG00000185989.10 TPM= 50.21 Transcript Type= protein_coding
chr13	114234870	114272670	114234870	114272670	+	transcript2413.chr13.nnic@CDC16	transcript2413.chr13.nnic	protein_coding	114234870,114236645,114236799,114238990,114239350,114242121,114243257,114243856,114244890,114246000,114246931,114250549,114257078,114259335,114261887,114262879,114265150,114269563,114272184	114235132,114236699,114236896,114239028,114239490,114242280,114243348,114243989,114244969,114246049,114247004,114250674,114257230,114259398,114261948,114263014,114265240,114269620,114272670	Gene ID= ENSG00000130177.14 TPM= 2.92 Transcript Type= NA
chr13	114234883	114272675	114234883	114272675	+	transcript2420.chr13.nnic@CDC16	transcript2420.chr13.nnic	protein_coding	114234883,114236799,114238990,114239350,114242121,114243257,114243856,114244890,114246000,114246931,114250549,114257078,114259335,114261887,114262879,114265150,114272184,114272564	114235132,114236896,114239028,114239490,114242280,114243348,114243989,114244969,114246049,114247004,114250674,114257230,114259398,114261948,114263014,114265240,114272481,114272675	Gene ID= ENSG00000130177.14 TPM= 3.5 Transcript Type= NA
chr13	114234870	114272675	114234870	114272675	+	transcript2423.chr13.nic@CDC16	transcript2423.chr13.nic	protein_coding	114234870,114236645,114236799,114238990,114239350,114242121,114243856,114244890,114246000,114246931,114250549,114257078,114259335,114261887,114262879,114265150,114272184	114235132,114236699,114236896,114239028,114239490,114243348,114243989,114244969,114246049,114247004,114250674,114257230,114259398,114261948,114263014,114265240,114272675	Gene ID= ENSG00000130177.14 TPM= 6.42 Transcript Type= NA
chr13	114234883	114272675	114234883	114272675	+	transcript2426.chr13.nnic@CDC16	transcript2426.chr13.nnic	protein_coding	114234883,114236799,114238990,114239350,114242121,114243257,114243856,114244890,114246000,114246931,114250549,114257078,114259335,114261887,114262879,114265150,114272184	114235132,114236896,114239028,114239490,114242280,114243348,114243989,114244969,114246049,114247004,114250674,114257230,114259398,114261948,114263014,114265240,114272675	Gene ID= ENSG00000130177.14 TPM= 5.25 Transcript Type= NA
chr13	114234925	114259114	114234925	114259114	+	transcript2434.chr13.nic@CDC16	transcript2434.chr13.nic	protein_coding	114234925,114236645,114236799,114238990,114239350,114242121,114243257,114243856,114244890,114246000,114246931,114250549,114257078	114235132,114236699,114236896,114239028,114239490,114242280,114243348,114243989,114244969,114246049,114247004,114250674,114259114	Gene ID= ENSG00000130177.14 TPM= 2.34 Transcript Type= NA
chr13	114234931	114259114	114234931	114259114	+	transcript2436.chr13.nic@CDC16	transcript2436.chr13.nic	protein_coding	114234931,114236645,114236799,114238990,114239350,114242121,114246000,114246931,114250549,114257078	114235132,114236699,114236896,114239028,114239490,114244969,114246049,114247004,114250674,114259114	Gene ID= ENSG00000130177.14 TPM= 2.34 Transcript Type= NA
chr13	114234977	114272675	114234977	114272675	+	ENST00000356221.7@CDC16	ENST00000356221.7	protein_coding	114234977,114236645,114236799,114238990,114239350,114242121,114243257,114243856,114244890,114246000,114246931,114250549,114257078,114259335,114261887,114262879,114265150,114272184	114235132,114236699,114236896,114239028,114239490,114242280,114243348,114243989,114244969,114246049,114247004,114250674,114257230,114259398,114261948,114263014,114265240,114272675	Gene ID= ENSG00000130177.14 TPM= 34.44 Transcript Type= protein_coding
chr13	114281584	114305817	114281584	114305817	+	ENST00000375299.7@UPF3A	ENST00000375299.7	protein_coding	114281584,114282021,114282837,114286302,114286519,114291489,114291634,114298840,114301731,114304789	114281846,114282127,114282943,114286400,114286629,114291544,114291792,114299000,114302025,114305817	Gene ID= ENSG00000169062.14 TPM= 13.33 Transcript Type= protein_coding
chr13	114281581	114305808	114281581	114305808	+	transcript2442.chr13.nic@UPF3A	transcript2442.chr13.nic	protein_coding	114281581,114282021,114282837,114286302,114286519,114291489,114291634,114301731,114304789	114281846,114282127,114282943,114286400,114286629,114291544,114291792,114302025,114305808	Gene ID= ENSG00000169062.14 TPM= 2.79 Transcript Type= NA
chr13	114281924	114305808	114281924	114305808	+	transcript2444.chr13.nnic@UPF3A	transcript2444.chr13.nnic	protein_coding	114281924,114282837,114284094,114286519,114291489,114291634,114298840,114301731,114304789	114282127,114282943,114284358,114286629,114291544,114291792,114299000,114302025,114305808	Gene ID= ENSG00000169062.14 TPM= 2.94 Transcript Type= NA
chr13	114281924	114305808	114281924	114305808	+	transcript2445.chr13.nic@UPF3A	transcript2445.chr13.nic	protein_coding	114281924,114282837,114286302,114286519,114291489,114291634,114298840,114301731,114304789	114282127,114282943,114286400,114286629,114291544,114291792,114299000,114302025,114305808	Gene ID= ENSG00000169062.14 TPM= 5.28 Transcript Type= NA
chr13	114281924	114305808	114281924	114305808	+	transcript2449.chr13.nic@UPF3A	transcript2449.chr13.nic	protein_coding	114281924,114282837,114286519,114291489,114291634,114298840,114301731,114304789	114282127,114282943,114286629,114291544,114291792,114299000,114302025,114305808	Gene ID= ENSG00000169062.14 TPM= 9.95 Transcript Type= NA
chr13	114282377	114305808	114282377	114305808	+	transcript2451.chr13.nnic@UPF3A	transcript2451.chr13.nnic	protein_coding	114282377,114282837,114286302,114286519,114291489,114291634,114301731,114304789	114282652,114282943,114286400,114286629,114291544,114291792,114302025,114305808	Gene ID= ENSG00000169062.14 TPM= 3.96 Transcript Type= NA
chr13	114281930	114305808	114281930	114305808	+	transcript2458.chr13.nnic@UPF3A	transcript2458.chr13.nnic	protein_coding	114281930,114286519,114291489,114291634,114298840,114301731,114304789	114282127,114286629,114291544,114291792,114299000,114302025,114305808	Gene ID= ENSG00000169062.14 TPM= 5.28 Transcript Type= NA
chr13	114282395	114305808	114282395	114305808	+	transcript2460.chr13.nic@UPF3A	transcript2460.chr13.nic	protein_coding	114282395,114286519,114291489,114291634,114298840,114301731,114304789	114282943,114286629,114291544,114291792,114299000,114302025,114305808	Gene ID= ENSG00000169062.14 TPM= 2.94 Transcript Type= NA
chr13	114282410	114305808	114282410	114305808	+	transcript2461.chr13.nic@UPF3A	transcript2461.chr13.nic	protein_coding	114282410,114286519,114291489,114291634,114298840,114301731,114304789	114286400,114286629,114291544,114291792,114299000,114302025,114305808	Gene ID= ENSG00000169062.14 TPM= 5.15 Transcript Type= NA
chr13	114281581	114291744	114281581	114291744	+	transcript2462.chr13.nic@UPF3A	transcript2462.chr13.nic	protein_coding	114281581,114282021,114282837,114286519,114291489,114291634	114281846,114282127,114282943,114286629,114291544,114291744	Gene ID= ENSG00000169062.14 TPM= 2.34 Transcript Type= NA
chr13	114284498	114305808	114284498	114305808	+	transcript2464.chr13.nic@UPF3A	transcript2464.chr13.nic	protein_coding	114284498,114286519,114291489,114291634,114301731,114304789	114286400,114286629,114291544,114291792,114302025,114305808	Gene ID= ENSG00000169062.14 TPM= 3.83 Transcript Type= NA
chr13	114281628	114305808	114281628	114305808	+	ENST00000351487.5@UPF3A	ENST00000351487.5	protein_coding	114281628,114282021,114282837,114286519,114291489,114291634,114298840,114301731,114304789	114281846,114282127,114282943,114286629,114291544,114291792,114299000,114302025,114305808	Gene ID= ENSG00000169062.14 TPM= 6.45 Transcript Type= protein_coding
chr13	114314345	114322438	114314345	114322438	+	transcript2473.chr13.nic@CHAMP1	transcript2473.chr13.nic	protein_coding	114314345,114321110,114322063	114314643,114321232,114322438	Gene ID= ENSG00000198824.5 TPM= 3.5 Transcript Type= NA
chr13	114314513	114327328	114314513	114327328	+	ENST00000361283.2@CHAMP1	ENST00000361283.2	protein_coding	114314513,114321110,114323788	114314643,114321232,114327328	Gene ID= ENSG00000198824.5 TPM= 3.5 Transcript Type= protein_coding
chr14	20286228	20305994	20286228	20305994	-	ENST00000258821.7@TTC5	ENST00000258821.7	protein_coding	20305887,20301833,20300607,20299298,20298797,20296390,20295708,20295312,20291983,20286228	20305994,20301965,20300818,20299448,20298888,20296446,20295854,20295526,20292127,20289746	Gene ID= ENSG00000136319.11 TPM= 3.5 Transcript Type= protein_coding
chr14	20311370	20333288	20311370	20333288	-	ENST00000358932.8@CCNB1IP1	ENST00000358932.8	protein_coding	20333254,20329174,20326716,20325539,20316227,20313468,20311370	20333288,20329373,20326793,20325653,20316560,20313801,20311752	Gene ID= ENSG00000100814.17 TPM= 17.51 Transcript Type= protein_coding
chr14	20343582	20357905	20343582	20357905	+	ENST00000429687.7@PARP2	ENST00000429687.7	protein_coding	20343582,20344932,20345394,20346863,20350526,20351047,20352245,20354085,20354809,20355752,20355897,20356307,20356590,20357051,20357396,20357638	20343687,20345087,20345464,20346913,20350622,20351122,20352347,20354247,20354947,20355815,20356031,20356434,20356689,20357149,20357520,20357905	Gene ID= ENSG00000129484.13 TPM= 2.34 Transcript Type= protein_coding
chr14	20343615	20357904	20343615	20357904	+	ENST00000250416.9@PARP2	ENST00000250416.9	protein_coding	20343615,20344932,20345394,20346863,20350526,20351047,20352245,20354085,20354809,20355752,20355897,20356307,20356590,20357051,20357396,20357638	20343687,20345126,20345464,20346913,20350622,20351122,20352347,20354247,20354947,20355815,20356031,20356434,20356689,20357149,20357520,20357904	Gene ID= ENSG00000129484.13 TPM= 10.51 Transcript Type= protein_coding
chr14	20343637	20357903	20343637	20357903	+	ENST00000527915.5@PARP2	ENST00000527915.5	protein_coding	20343637,20344932,20345394,20346863,20350526,20351047,20352245,20354085,20354809,20355752,20355897,20356307,20356590,20357051,20357396	20343687,20345126,20345464,20346913,20350622,20351122,20352347,20354247,20354947,20355815,20356031,20356434,20356689,20357149,20357903	Gene ID= ENSG00000129484.13 TPM= 2.34 Transcript Type= protein_coding
chr14	20446668	20455105	20446668	20455105	-	ENST00000206542.8@OSGEP	ENST00000206542.8	protein_coding	20454569,20452329,20451974,20449171,20448964,20448733,20448106,20447904,20447615,20447422,20446668	20455105,20452448,20452149,20449266,20449013,20448811,20448171,20447994,20447690,20447520,20447279	Gene ID= ENSG00000092094.10 TPM= 19.85 Transcript Type= protein_coding
chr14	20455191	20457772	20455191	20457772	+	ENST00000555414.5@APEX1	ENST00000555414.5	protein_coding	20455191,20455578,20455914,20456668,20456991	20455338,20455703,20456101,20456860,20457772	Gene ID= ENSG00000100823.11 TPM= 15.96 Transcript Type= protein_coding
chr14	20455195	20457767	20455195	20457767	+	ENST00000216714.7@APEX1	ENST00000216714.7	protein_coding	20455195,20455578,20455914,20456668,20456991	20455394,20455703,20456101,20456860,20457767	Gene ID= ENSG00000100823.11 TPM= 81.35 Transcript Type= protein_coding
chr14	20455240	20457738	20455240	20457738	+	ENST00000557159.5@APEX1	ENST00000557159.5	protein_coding	20455240,20456668,20456991	20456101,20456860,20457738	Gene ID= ENSG00000100823.11 TPM= 15.18 Transcript Type= retained_intron
chr14	20455226	20457767	20455226	20457767	+	ENST00000398030.8@APEX1	ENST00000398030.8	protein_coding	20455226,20455578,20455914,20456668,20456991	20455328,20455703,20456101,20456860,20457767	Gene ID= ENSG00000100823.11 TPM= 12.46 Transcript Type= protein_coding
chr14	20455226	20457734	20455226	20457734	+	ENST00000553555.5@APEX1	ENST00000553555.5	protein_coding	20455226,20455914,20456668,20456991	20455703,20456101,20456860,20457734	Gene ID= ENSG00000100823.11 TPM= 8.17 Transcript Type= retained_intron
chr14	20457719	20461612	20457719	20461612	-	ENST00000250489.8@TMEM55B	ENST00000250489.8	protein_coding	20461184,20460655,20460192,20459628,20459388,20459206,20457719	20461612,20460845,20460298,20459733,20459440,20459296,20458702	Gene ID= ENSG00000165782.10 TPM= 57.6 Transcript Type= protein_coding
chr14	20457858	20461465	20457858	20461465	-	ENST00000398020.6@TMEM55B	ENST00000398020.6	protein_coding	20461163,20460655,20460192,20459628,20459388,20459206,20457858	20461465,20460845,20460298,20459733,20459440,20459296,20458702	Gene ID= ENSG00000165782.10 TPM= 37.75 Transcript Type= protein_coding
chr14	20457858	20461439	20457858	20461439	-	transcript34.chr14.nic@TMEM55B	transcript34.chr14.nic	protein_coding	20460655,20460192,20459628,20459388,20459206,20457858	20461439,20460298,20459733,20459440,20459296,20458702	Gene ID= ENSG00000165782.10 TPM= 12.06 Transcript Type= NA
chr14	20457858	20461473	20457858	20461473	-	transcript35.chr14.nic@TMEM55B	transcript35.chr14.nic	protein_coding	20461163,20460192,20459628,20459388,20459206,20457858	20461473,20460845,20459733,20459440,20459296,20458702	Gene ID= ENSG00000165782.10 TPM= 4.67 Transcript Type= NA
chr14	20457858	20461618	20457858	20461618	-	transcript47.chr14.nic@TMEM55B	transcript47.chr14.nic	protein_coding	20460192,20459388,20459206,20457858	20461618,20459733,20459296,20458702	Gene ID= ENSG00000165782.10 TPM= 3.5 Transcript Type= NA
chr14	20457858	20461401	20457858	20461401	-	ENST00000557041.1@TMEM55B	ENST00000557041.1	protein_coding	20459388,20457858	20461401,20459296	Gene ID= ENSG00000165782.10 TPM= 2.34 Transcript Type= retained_intron
chr14	20469379	20477094	20469379	20477094	+	ENST00000361505.9@PNP	ENST00000361505.9	protein_coding	20469379,20472308,20474472,20474773,20475062,20476384	20469535,20472477,20474575,20474948,20475252,20477094	Gene ID= ENSG00000198805.11 TPM= 21.02 Transcript Type= protein_coding
chr14	20684100	20701215	20684100	20701215	+	ENST00000555835.2@RNASE4	ENST00000555835.2	protein_coding	20684100,20699355	20684758,20701215	Gene ID= ENSG00000258818.3 TPM= 72.39 Transcript Type= protein_coding
chr14	20684177	20694186	20684177	20694186	+	ENST00000336811.10@ANG	ENST00000336811.10	protein_coding	20684177,20693547	20684758,20694186	Gene ID= ENSG00000214274.9 TPM= 14.01 Transcript Type= protein_coding
chr14	20684587	20700576	20684587	20700576	+	ENST00000553909.1@AL163636.2	ENST00000553909.1	protein_coding	20684587,20693547,20699355	20684758,20693650,20700576	Gene ID= ENSG00000259171.1 TPM= 12.84 Transcript Type= protein_coding
chr14	20781068	20782467	20781068	20782467	+	transcript68.chr14.nnic@RNASE6	transcript68.chr14.nnic	protein_coding	20781068,20781242,20781695	20781128,20781338,20782467	Gene ID= ENSG00000169413.2 TPM= 2.34 Transcript Type= NA
chr14	20781051	20782467	20781051	20782467	+	ENST00000304677.2@RNASE6	ENST00000304677.2	protein_coding	20781051,20781695	20781338,20782467	Gene ID= ENSG00000169413.2 TPM= 21.02 Transcript Type= protein_coding
chr14	20801346	20802855	20801346	20802855	-	ENST00000340900.3@RNASE1	ENST00000340900.3	protein_coding	20802797,20802249,20801346	20802855,20802319,20802093	Gene ID= ENSG00000129538.13 TPM= 481.05 Transcript Type= protein_coding
chr14	20801228	20803278	20801228	20803278	-	ENST00000397967.4@RNASE1	ENST00000397967.4	protein_coding	20802797,20801228	20803278,20802093	Gene ID= ENSG00000129538.13 TPM= 959.76 Transcript Type= protein_coding
chr14	20989770	20997035	20989770	20997035	+	ENST00000339374.10@METTL17	ENST00000339374.10	protein_coding	20989770,20990230,20990464,20992124,20992541,20993118,20993969,20994543,20994794,20995165,20995901,20996209,20996527,20996785	20990077,20990383,20990598,20992205,20992622,20993191,20994063,20994613,20994901,20995233,20995951,20996292,20996711,20997035	Gene ID= ENSG00000165792.17 TPM= 18.1 Transcript Type= protein_coding
chr14	20989980	20997030	20989980	20997030	+	transcript84.chr14.nic@METTL17	transcript84.chr14.nic	protein_coding	20989980,20990230,20990464,20992092,20992541,20993118,20993969,20994543,20994794,20995901,20996209,20996527,20996785	20990077,20990383,20990598,20992205,20992622,20993191,20994063,20994613,20995233,20995951,20996292,20996711,20997030	Gene ID= ENSG00000165792.17 TPM= 7.01 Transcript Type= NA
chr14	20989791	20997010	20989791	20997010	+	transcript90.chr14.nic@METTL17	transcript90.chr14.nic	protein_coding	20989791,20990230,20990464,20992092,20992541,20993118,20993969,20994543,20994794,20995901,20996209,20996527	20990077,20990383,20990598,20992205,20992622,20993191,20994063,20994613,20995233,20995951,20996292,20997010	Gene ID= ENSG00000165792.17 TPM= 3.5 Transcript Type= NA
chr14	20989986	20997030	20989986	20997030	+	transcript92.chr14.nic@METTL17	transcript92.chr14.nic	protein_coding	20989986,20990230,20990464,20992092,20992541,20993118,20994543,20994794,20995901,20996209,20996527,20996785	20990077,20990383,20990598,20992205,20992622,20994063,20994613,20995233,20995951,20996292,20996711,20997030	Gene ID= ENSG00000165792.17 TPM= 2.34 Transcript Type= NA
chr14	20989988	20997010	20989988	20997010	+	transcript93.chr14.nic@METTL17	transcript93.chr14.nic	protein_coding	20989988,20990230,20990464,20992124,20992541,20993118,20993969,20994543,20994794,20995901,20996209,20996527	20990077,20990383,20990598,20992205,20992622,20993191,20994063,20994613,20995233,20995951,20996292,20997010	Gene ID= ENSG00000165792.17 TPM= 2.34 Transcript Type= NA
chr14	20989987	20997030	20989987	20997030	+	ENST00000556670.6@METTL17	ENST00000556670.6	protein_coding	20989987,20990230,20990464,20992124,20992541,20993118,20993969,20994543,20994794,20995165,20995901,20996209,20996527,20996812	20990077,20990383,20990598,20992205,20992622,20993191,20994063,20994613,20994901,20995233,20995951,20996292,20996711,20997030	Gene ID= ENSG00000165792.17 TPM= 2.34 Transcript Type= protein_coding
chr14	20989980	20997009	20989980	20997009	+	ENST00000382985.8@METTL17	ENST00000382985.8	protein_coding	20989980,20990230,20990464,20992124,20992541,20993118,20993969,20994543,20994794,20995165,20995901,20996209,20996527	20990077,20990383,20990598,20992205,20992622,20993191,20994063,20994613,20994901,20995233,20995951,20996292,20997009	Gene ID= ENSG00000165792.17 TPM= 5.25 Transcript Type= protein_coding
chr14	20989994	20997010	20989994	20997010	+	ENST00000555533.6@METTL17	ENST00000555533.6	protein_coding	20989994,20990230,20990464,20992092,20992541,20993118,20993969,20994543,20994794,20995165,20995901,20996209,20996527	20990077,20990383,20990598,20992205,20992622,20993191,20994063,20994613,20994901,20995233,20995951,20996292,20997010	Gene ID= ENSG00000165792.17 TPM= 8.17 Transcript Type= nonsense_mediated_decay
chr14	20990003	20997016	20990003	20997016	+	ENST00000557550.6@METTL17	ENST00000557550.6	protein_coding	20990003,20990230,20990464,20992092,20992541,20993118,20993969,20994543,20994794,20995165,20995901,20996209,20996527,20996785	20990077,20990383,20990598,20992205,20992622,20993191,20994063,20994613,20994901,20995233,20995951,20996292,20996711,20997016	Gene ID= ENSG00000165792.17 TPM= 4.67 Transcript Type= nonsense_mediated_decay
chr14	20989994	20996995	20989994	20996995	+	ENST00000555640.6@METTL17	ENST00000555640.6	protein_coding	20989994,20990230,20990464,20992092,20992541,20993118,20994543,20994794,20995901,20996527	20990077,20990383,20990598,20992205,20992622,20994063,20994613,20995233,20996292,20996995	Gene ID= ENSG00000165792.17 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr14	21016763	21025776	21016763	21025776	-	ENST00000298687.9@NDRG2	ENST00000298687.9	protein_coding	21025677,21024030,21023241,21022864,21022392,21022062,21021817,21020784,21020496,21019920,21019639,21019116,21018763,21018457,21018204,21017987,21016763	21025776,21024096,21023321,21022905,21022497,21022182,21021879,21020844,21020582,21019976,21019742,21019160,21018814,21018504,21018239,21018038,21017762	Gene ID= ENSG00000165795.23 TPM= 13.11 Transcript Type= protein_coding
chr14	21016764	21025776	21016764	21025776	-	ENST00000397858.5@NDRG2	ENST00000397858.5	protein_coding	21025677,21023241,21022864,21022392,21022062,21021817,21020784,21020496,21019920,21019639,21019116,21018763,21018457,21018204,21017987,21016764	21025776,21023321,21022905,21022497,21022182,21021879,21020844,21020582,21019976,21019742,21019160,21018814,21018504,21018239,21018038,21017762	Gene ID= ENSG00000165795.23 TPM= 15.79 Transcript Type= protein_coding
chr14	21016772	21025105	21016772	21025105	-	transcript114.chr14.nic@NDRG2	transcript114.chr14.nic	protein_coding	21025029,21024030,21023241,21022392,21022062,21021817,21020784,21020496,21019920,21019639,21019116,21018763,21018457,21018204,21017987,21016772	21025105,21024096,21023321,21022497,21022182,21021879,21020844,21020582,21019976,21019742,21019160,21018814,21018504,21018239,21018038,21017762	Gene ID= ENSG00000165795.23 TPM= 34.95 Transcript Type= NA
chr14	21016763	21025823	21016763	21025823	-	ENST00000350792.7@NDRG2	ENST00000350792.7	protein_coding	21025677,21024030,21023241,21022392,21022062,21021817,21020784,21020496,21019920,21019639,21019116,21018763,21018457,21018204,21017987,21016763	21025823,21024096,21023321,21022497,21022182,21021879,21020844,21020582,21019976,21019742,21019160,21018814,21018504,21018239,21018038,21017762	Gene ID= ENSG00000165795.23 TPM= 14.75 Transcript Type= protein_coding
chr14	21016772	21025819	21016772	21025819	-	ENST00000360463.7@NDRG2	ENST00000360463.7	protein_coding	21025677,21023241,21022392,21022062,21021817,21020784,21020496,21019920,21019639,21019116,21018763,21018457,21018204,21017987,21016772	21025819,21023321,21022497,21022182,21021879,21020844,21020582,21019976,21019742,21019160,21018814,21018504,21018239,21018038,21017762	Gene ID= ENSG00000165795.23 TPM= 12.75 Transcript Type= protein_coding
chr14	21016772	21025094	21016772	21025094	-	ENST00000397853.7@NDRG2	ENST00000397853.7	protein_coding	21025029,21024030,21023241,21022864,21022392,21022062,21021817,21020784,21020496,21019920,21019639,21019116,21018763,21018457,21018204,21017987,21016772	21025094,21024096,21023321,21022905,21022497,21022182,21021879,21020844,21020582,21019976,21019742,21019160,21018814,21018504,21018239,21018038,21017762	Gene ID= ENSG00000165795.23 TPM= 43.42 Transcript Type= protein_coding
chr14	21016773	21025105	21016773	21025105	-	ENST00000397851.6@NDRG2	ENST00000397851.6	protein_coding	21025029,21023241,21022864,21022392,21022062,21021817,21020784,21020496,21019920,21019639,21019116,21018763,21018457,21018204,21017987,21016773	21025105,21023321,21022905,21022497,21022182,21021879,21020844,21020582,21019976,21019742,21019160,21018814,21018504,21018239,21018038,21017762	Gene ID= ENSG00000165795.23 TPM= 22.6 Transcript Type= protein_coding
chr14	21016773	21025105	21016773	21025105	-	ENST00000554143.5@NDRG2	ENST00000554143.5	protein_coding	21025029,21023241,21022392,21022062,21021817,21020784,21020496,21019920,21019639,21019116,21018763,21018457,21018204,21017987,21016773	21025105,21023321,21022497,21022182,21021879,21020844,21020582,21019976,21019742,21019160,21018814,21018504,21018239,21018038,21017762	Gene ID= ENSG00000165795.23 TPM= 27.94 Transcript Type= protein_coding
chr14	21016772	21022820	21016772	21022820	-	ENST00000554104.5@NDRG2	ENST00000554104.5	protein_coding	21022392,21022062,21021817,21020784,21020496,21019920,21019639,21019116,21018763,21018457,21018204,21017987,21016772	21022820,21022182,21021879,21020844,21020582,21019976,21019742,21019160,21018814,21018504,21018239,21018038,21017762	Gene ID= ENSG00000165795.23 TPM= 3.92 Transcript Type= protein_coding
chr14	21070110	21090240	21070110	21090240	+	transcript128.chr14.nnic@ARHGEF40	transcript128.chr14.nnic	protein_coding	21070110,21073045,21073932,21075332,21075645,21076360,21076563,21076774,21078177,21078373,21078884,21080660,21080873,21081509,21082244,21082831,21083835,21084753,21085689,21087001,21087320,21087968,21088830,21089014	21070399,21073178,21075180,21075499,21075765,21076456,21076643,21076890,21078272,21078488,21079010,21080782,21081016,21082119,21082478,21082917,21084050,21084923,21085866,21087105,21087463,21088098,21088876,21090240	Gene ID= ENSG00000165801.9 TPM= 5.25 Transcript Type= NA
chr14	21070249	21089545	21070249	21089545	+	transcript133.chr14.nic@ARHGEF40	transcript133.chr14.nic	protein_coding	21070249,21073045,21073932,21075332,21075645,21076360,21076563,21076774,21078177,21078373,21078884,21080660,21080873,21081509,21082244,21082831,21083835,21084753,21085689,21087001,21087320,21087968,21088830	21070399,21073242,21075180,21075499,21075765,21076456,21076643,21076890,21078272,21078488,21079010,21080782,21081016,21082119,21082478,21082917,21084050,21084923,21085866,21087105,21087463,21088098,21089545	Gene ID= ENSG00000165801.9 TPM= 3.3 Transcript Type= NA
chr14	21070265	21089545	21070265	21089545	+	transcript134.chr14.nic@ARHGEF40	transcript134.chr14.nic	protein_coding	21070265,21073045,21073932,21075332,21075645,21076360,21076563,21076774,21078177,21078373,21078884,21080660,21080873,21081509,21082244,21082831,21083835,21084753,21085689,21087001,21087968,21088830,21089014	21070399,21073242,21075180,21075499,21075765,21076456,21076643,21076890,21078272,21078488,21079010,21080782,21081016,21082119,21082478,21082917,21084050,21084923,21085866,21087105,21088098,21088876,21089545	Gene ID= ENSG00000165801.9 TPM= 3.89 Transcript Type= NA
chr14	21070249	21089545	21070249	21089545	+	transcript138.chr14.nnic@ARHGEF40	transcript138.chr14.nnic	protein_coding	21070249,21075332,21075645,21076360,21076563,21076774,21078177,21078373,21078884,21080660,21080873,21081509,21082244,21082831,21083835,21084753,21085689,21087001,21087320,21087968,21088830,21089014	21070399,21075499,21075765,21076456,21076643,21076890,21078272,21078488,21079010,21080782,21081016,21082119,21082478,21082917,21084050,21084923,21085866,21087105,21087463,21088098,21088876,21089545	Gene ID= ENSG00000165801.9 TPM= 19.65 Transcript Type= NA
chr14	21070270	21090240	21070270	21090240	+	ENST00000298694.8@ARHGEF40	ENST00000298694.8	protein_coding	21070270,21073045,21073932,21075332,21075645,21076360,21076563,21076774,21078177,21078373,21078884,21080660,21080873,21081509,21082244,21082831,21083835,21084753,21085689,21087001,21087320,21087968,21088830,21089014	21070399,21073242,21075180,21075499,21075765,21076456,21076643,21076890,21078272,21078488,21079010,21080782,21081016,21082119,21082478,21082917,21084050,21084923,21085866,21087105,21087463,21088098,21088876,21090240	Gene ID= ENSG00000165801.9 TPM= 13.43 Transcript Type= protein_coding
chr14	21090046	21098640	21090046	21098640	-	ENST00000360947.7@ZNF219	ENST00000360947.7	protein_coding	21098312,21093586,21091865,21091411,21090046	21098640,21093674,21093290,21091542,21091140	Gene ID= ENSG00000165804.15 TPM= 136.22 Transcript Type= protein_coding
chr14	21090084	21099014	21090084	21099014	-	ENST00000421093.6@ZNF219	ENST00000421093.6	protein_coding	21098811,21093586,21091865,21091411,21090084	21099014,21093674,21093290,21091542,21091140	Gene ID= ENSG00000165804.15 TPM= 30.56 Transcript Type= protein_coding
chr14	21200270	21201931	21200270	21201931	-	transcript156.chr14.nnic@NA	transcript156.chr14.nnic	NA	21200270	21201931	Gene ID= novel_gene_chr14_157 TPM= 2.34 Transcript Type= NA
chr14	21210534	21269425	21210534	21269425	-	ENST00000554969.5@HNRNPC	ENST00000554969.5	protein_coding	21269298,21263667,21263311,21233953,21230997,21230319,21212960,21211810,21211406,21210534	21269425,21263829,21263336,21234229,21231072,21230366,21213117,21211923,21211566,21211306	Gene ID= ENSG00000092199.17 TPM= 11.29 Transcript Type= protein_coding
chr14	21210550	21269428	21210550	21269428	-	transcript168.chr14.nic@HNRNPC	transcript168.chr14.nic	protein_coding	21269298,21262601,21233953,21230997,21230319,21212960,21211810,21211406,21210550	21269428,21263829,21234229,21231072,21230366,21213117,21211923,21211566,21211306	Gene ID= ENSG00000092199.17 TPM= 14.21 Transcript Type= NA
chr14	21210550	21269465	21210550	21269465	-	transcript179.chr14.nic@HNRNPC	transcript179.chr14.nic	protein_coding	21269298,21233953,21230997,21230319,21212960,21211810,21211406,21210550	21269465,21234229,21231072,21230366,21213117,21211923,21211566,21211306	Gene ID= ENSG00000092199.17 TPM= 24.72 Transcript Type= NA
chr14	21210582	21269403	21210582	21269403	-	ENST00000553753.5@HNRNPC	ENST00000553753.5	protein_coding	21269298,21263311,21233953,21230997,21230319,21212960,21211810,21210582	21269403,21263336,21234229,21231072,21230366,21213117,21211923,21211566	Gene ID= ENSG00000092199.17 TPM= 2.34 Transcript Type= protein_coding
chr14	21210937	21269442	21210937	21269442	-	ENST00000553300.5@HNRNPC	ENST00000553300.5	protein_coding	21269298,21263311,21233953,21230997,21230319,21212960,21211810,21211406,21210937	21269442,21263336,21234229,21231072,21230366,21213117,21211923,21211566,21211306	Gene ID= ENSG00000092199.17 TPM= 103.6 Transcript Type= protein_coding
chr14	21210937	21269425	21210937	21269425	-	ENST00000557201.5@HNRNPC	ENST00000557201.5	protein_coding	21269298,21233953,21230958,21230319,21212960,21211810,21211406,21210937	21269425,21234229,21231072,21230366,21213117,21211923,21211566,21211306	Gene ID= ENSG00000092199.17 TPM= 5.14 Transcript Type= protein_coding
chr14	21247214	21249435	21247214	21249435	+	transcript192.chr14.nnic@NA	transcript192.chr14.nnic	NA	21247214	21249435	Gene ID= novel_gene_chr14_193 TPM= 7.01 Transcript Type= NA
chr14	21261656	21266146	21261656	21266146	+	transcript190.chr14.nnic@NA	transcript190.chr14.nnic	NA	21261656	21266146	Gene ID= novel_gene_chr14_191 TPM= 5.84 Transcript Type= NA
chr14	21351479	21384019	21351479	21384019	-	transcript201.chr14.nic@SUPT16H	transcript201.chr14.nic	protein_coding	21383862,21373338,21371874,21370336,21369204,21368269,21366439,21365070,21364827,21363438,21363233,21363034,21362794,21362197,21361078,21360846,21360415,21359484,21357927,21357197,21354411,21353703,21353488,21351479	21384019,21373430,21372044,21370488,21369896,21368441,21366529,21365143,21364939,21363503,21363328,21363149,21362947,21362324,21361213,21360972,21360533,21359609,21358427,21357366,21354540,21353832,21353565,21352818	Gene ID= ENSG00000092201.9 TPM= 11.68 Transcript Type= NA
chr14	21361312	21384228	21361312	21384228	-	transcript203.chr14.nic@SUPT16H	transcript203.chr14.nic	protein_coding	21383862,21373338,21371874,21370336,21369750,21369204,21368269,21366439,21365070,21364827,21363438,21363233,21363034,21361312	21384228,21373430,21372044,21370488,21369896,21369355,21368441,21366529,21365143,21364939,21363503,21363328,21363149,21362947	Gene ID= ENSG00000092201.9 TPM= 4.67 Transcript Type= NA
chr14	21382975	21383981	21382975	21383981	-	ENST00000555943.1@SUPT16H	ENST00000555943.1	protein_coding	21383862,21382975	21383981,21383769	Gene ID= ENSG00000092201.9 TPM= 1.17 Transcript Type= protein_coding
chr14	21385199	21386344	21385199	21386344	-	ENST00000557727.1@CHD8	ENST00000557727.1	protein_coding	21385199	21386344	Gene ID= ENSG00000100888.12 TPM= 2.34 Transcript Type= retained_intron
chr14	21385486	21456080	21385486	21456080	-	ENST00000557364.5@CHD8	ENST00000557364.5	protein_coding	21456032,21430801,21428964,21427869,21426128,21415725,21415574,21414938,21414301,21412913,21409851,21408704,21408312,21406856,21405721,21405209,21403453,21403017,21402336,21401957,21401403,21400875,21400413,21400151,21399981,21399602,21397823,21395817,21395298,21394912,21394277,21393476,21393106,21392507,21391833,21391463,21390947,21385486	21456080,21431858,21429335,21428254,21426242,21415907,21415642,21414993,21414418,21412996,21409988,21408825,21408555,21407032,21405864,21405464,21403663,21403212,21402503,21402136,21401513,21401071,21400612,21400307,21400070,21399705,21397952,21395892,21395352,21395119,21394485,21394195,21393254,21392809,21391946,21391642,21391063,21386176	Gene ID= ENSG00000100888.12 TPM= 12.84 Transcript Type= protein_coding
chr14	21459020	21476979	21459020	21476979	-	transcript215.chr14.nnic@RAB2B	transcript215.chr14.nnic	protein_coding	21476827,21476528,21474867,21468670,21468357,21463656,21462350,21460978,21459020	21476979,21476599,21474934,21468752,21468449,21463767,21462418,21461303,21460345	Gene ID= ENSG00000129472.13 TPM= 18.68 Transcript Type= NA
chr14	21476755	21499175	21476755	21499175	+	ENST00000613569.4@TOX4	ENST00000613569.4	protein_coding	21476755,21477122,21477496,21487451,21488590,21489173,21492296,21492508,21495229,21496546	21476873,21477284,21477564,21487693,21488850,21489403,21492376,21493257,21495392,21499175	Gene ID= ENSG00000092203.13 TPM= 18.68 Transcript Type= protein_coding
chr14	21498138	21511375	21498138	21511375	-	ENST00000298717.8@METTL3	ENST00000298717.8	protein_coding	21511124,21503664,21503173,21501728,21500913,21500495,21499764,21499492,21499306,21499025,21498138	21511375,21503881,21503577,21501903,21501129,21500682,21499802,21499600,21499371,21499137,21498369	Gene ID= ENSG00000165819.11 TPM= 25.69 Transcript Type= protein_coding
chr14	21498146	21511345	21498146	21511345	-	transcript214.chr14.nic@METTL3	transcript214.chr14.nic	protein_coding	21511124,21503664,21503173,21501728,21500913,21500495,21499764,21499306,21499025,21498146	21511345,21503881,21503577,21501903,21501129,21500682,21499802,21499600,21499137,21498369	Gene ID= ENSG00000165819.11 TPM= 2.34 Transcript Type= NA
chr14	21498146	21511345	21498146	21511345	-	transcript218.chr14.nnic@METTL3	transcript218.chr14.nnic	protein_coding	21511124,21503664,21503173,21501708,21500913,21500495,21499764,21499025,21498146	21511345,21503881,21503577,21501903,21501129,21500682,21499802,21499600,21498369	Gene ID= ENSG00000165819.11 TPM= 2.92 Transcript Type= NA
chr14	21498173	21511310	21498173	21511310	-	ENST00000543235.5@METTL3	ENST00000543235.5	protein_coding	21511124,21503664,21503173,21501728,21500913,21500495,21499764,21499025,21498173	21511310,21503881,21503577,21501824,21501129,21500682,21499802,21499600,21498369	Gene ID= ENSG00000165819.11 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr14	22564905	22589269	22564905	22589269	-	ENST00000250498.8@DAD1	ENST00000250498.8	protein_coding	22588947,22575059,22564905	22589269,22575233,22565137	Gene ID= ENSG00000129562.10 TPM= 141.28 Transcript Type= protein_coding
chr14	22583179	22586212	22583179	22586212	+	transcript248.chr14.nnic@NA	transcript248.chr14.nnic	NA	22583179	22586212	Gene ID= novel_gene_chr14_249 TPM= 2.34 Transcript Type= NA
chr14	22598237	22613215	22598237	22613215	+	ENST00000428304.6@ABHD4	ENST00000428304.6	protein_coding	22598237,22601667,22603390,22603925,22606422,22609724,22610859	22598329,22601755,22603762,22604079,22606533,22609910,22613215	Gene ID= ENSG00000100439.10 TPM= 30.36 Transcript Type= protein_coding
chr14	22766522	22771789	22766522	22771789	+	ENST00000285848.9@OXA1L	ENST00000285848.9	protein_coding	22766522,22767248,22767958,22769791,22770193,22770461,22770805,22771018,22771268,22771434	22766764,22767409,22768171,22769934,22770278,22770625,22770909,22771180,22771348,22771789	Gene ID= ENSG00000155463.12 TPM= 150.91 Transcript Type= protein_coding
chr14	22766522	22773041	22766522	22773041	+	ENST00000612549.4@OXA1L	ENST00000612549.4	protein_coding	22766522,22767248,22767958,22769791,22770193,22770461,22770805,22771018,22771268,22771434	22766764,22767409,22768171,22769934,22770278,22770625,22770909,22771180,22771348,22773041	Gene ID= ENSG00000155463.12 TPM= 7.3 Transcript Type= protein_coding
chr14	22766703	22771754	22766703	22771754	+	ENST00000495424.5@OXA1L	ENST00000495424.5	protein_coding	22766703,22767248,22767958,22769797,22770193,22770805,22771018,22771268,22771434	22766764,22767409,22768171,22769934,22770625,22770909,22771180,22771348,22771754	Gene ID= ENSG00000155463.12 TPM= 12.84 Transcript Type= retained_intron
chr14	22773222	22819811	22773222	22819811	-	ENST00000555702.5@SLC7A7	ENST00000555702.5	protein_coding	22819638,22815320,22812900,22779926,22778793,22776195,22775833,22775444,22774354,22773933,22773222	22819811,22815451,22813440,22780051,22778937,22776318,22775936,22775540,22774503,22774116,22773716	Gene ID= ENSG00000155465.18 TPM= 67.72 Transcript Type= protein_coding
chr14	22773225	22815803	22773225	22815803	-	ENST00000397532.7@SLC7A7	ENST00000397532.7	protein_coding	22815320,22812900,22779926,22778793,22776195,22775833,22775444,22774354,22773933,22773225	22815803,22813440,22780051,22778937,22776318,22775936,22775540,22774503,22774116,22773716	Gene ID= ENSG00000155465.18 TPM= 31.53 Transcript Type= protein_coding
chr14	22773253	22819796	22773253	22819796	-	ENST00000397529.6@SLC7A7	ENST00000397529.6	protein_coding	22819638,22812900,22779926,22778793,22776195,22775833,22775444,22774354,22773933,22773253	22819796,22813440,22780051,22778937,22776318,22775936,22775540,22774503,22774116,22773716	Gene ID= ENSG00000155465.18 TPM= 1.17 Transcript Type= protein_coding
chr14	22829887	22835037	22829887	22835037	+	ENST00000397496.7@MRPL52	ENST00000397496.7	protein_coding	22829887,22830053,22830187,22833418,22834172	22829940,22830110,22830254,22833482,22835037	Gene ID= ENSG00000172590.18 TPM= 16.93 Transcript Type= protein_coding
chr14	22829883	22835037	22829883	22835037	+	ENST00000355151.9@MRPL52	ENST00000355151.9	protein_coding	22829883,22830050,22830187,22833418,22834172	22829940,22830110,22830254,22833482,22835037	Gene ID= ENSG00000172590.18 TPM= 20.43 Transcript Type= protein_coding
chr14	22829921	22834347	22829921	22834347	+	ENST00000556840.5@MRPL52	ENST00000556840.5	protein_coding	22829921,22830050,22830187,22833418,22834172	22829948,22830110,22830254,22833482,22834347	Gene ID= ENSG00000172590.18 TPM= 17.51 Transcript Type= protein_coding
chr14	22829913	22834347	22829913	22834347	+	ENST00000397505.2@MRPL52	ENST00000397505.2	protein_coding	22829913,22830050,22830187,22834172	22829940,22830110,22830254,22834347	Gene ID= ENSG00000172590.18 TPM= 1.17 Transcript Type= protein_coding
chr14	22836557	22847761	22836557	22847761	+	ENST00000311852.10@MMP14	ENST00000311852.10	protein_coding	22836557,22841491,22841913,22842410,22843257,22843710,22844371,22844630,22845251,22845708	22836925,22841639,22842035,22842717,22843418,22843870,22844509,22844780,22845366,22847761	Gene ID= ENSG00000157227.12 TPM= 21.02 Transcript Type= protein_coding
chr14	22871712	22878084	22871712	22878084	+	transcript295.chr14.nnic@LRP10	transcript295.chr14.nnic	protein_coding	22871712,22872738,22873311,22875055,22875331,22876689,22876940	22872337,22872782,22873446,22875245,22876372,22876818,22878084	Gene ID= ENSG00000197324.8 TPM= 38.96 Transcript Type= NA
chr14	22871613	22881580	22871613	22881580	+	ENST00000359591.8@LRP10	ENST00000359591.8	protein_coding	22871613,22872738,22873311,22875055,22875355,22876689,22876940	22872337,22872782,22873446,22875245,22876372,22876818,22881580	Gene ID= ENSG00000197324.8 TPM= 106.36 Transcript Type= protein_coding
chr14	22883165	22887686	22883165	22887686	+	ENST00000267396.8@REM2	ENST00000267396.8	protein_coding	22883165,22884674,22885266,22886024,22886614	22883390,22885015,22885339,22886231,22887686	Gene ID= ENSG00000139890.9 TPM= 1.17 Transcript Type= protein_coding
chr14	22893206	22919184	22893206	22919184	-	ENST00000359890.7@RBM23	ENST00000359890.7	protein_coding	22918999,22911328,22909483,22908333,22906195,22905606,22905336,22905094,22904875,22904261,22902187,22901980,22901814,22893206	22919184,22911403,22909595,22908380,22906368,22905659,22905453,22905246,22905012,22904326,22902382,22902099,22901883,22901733	Gene ID= ENSG00000100461.17 TPM= 18.68 Transcript Type= protein_coding
chr14	22900766	22919140	22900766	22919140	-	transcript312.chr14.nic@RBM23	transcript312.chr14.nic	protein_coding	22918999,22913724,22911328,22909483,22906195,22905606,22905336,22905094,22904875,22904261,22902187,22901980,22901814,22900766	22919140,22913845,22911403,22909595,22906368,22905659,22905453,22905246,22905012,22904326,22902382,22902099,22901883,22901733	Gene ID= ENSG00000100461.17 TPM= 2.86 Transcript Type= NA
chr14	22900766	22919182	22900766	22919182	-	transcript313.chr14.nic@RBM23	transcript313.chr14.nic	protein_coding	22918999,22911328,22908333,22906195,22905606,22905336,22905094,22904875,22904261,22902187,22901980,22901814,22900766	22919182,22911403,22908380,22906368,22905659,22905453,22905246,22905012,22904326,22902382,22902099,22901883,22901733	Gene ID= ENSG00000100461.17 TPM= 2.86 Transcript Type= NA
chr14	22900766	22919182	22900766	22919182	-	ENST00000399922.6@RBM23	ENST00000399922.6	protein_coding	22918999,22911328,22909483,22906195,22905606,22905336,22905094,22904875,22904261,22902187,22901980,22901814,22900766	22919182,22911403,22909595,22906368,22905659,22905453,22905246,22905012,22904326,22902382,22902099,22901883,22901733	Gene ID= ENSG00000100461.17 TPM= 19.21 Transcript Type= protein_coding
chr14	22900766	22919182	22900766	22919182	-	transcript318.chr14.nic@RBM23	transcript318.chr14.nic	protein_coding	22918999,22911328,22906195,22905336,22905094,22904875,22904261,22902187,22901980,22901814,22900766	22919182,22911403,22906368,22905453,22905246,22905012,22904326,22902382,22902099,22901883,22901733	Gene ID= ENSG00000100461.17 TPM= 2.86 Transcript Type= NA
chr14	22900777	22919178	22900777	22919178	-	ENST00000346528.9@RBM23	ENST00000346528.9	protein_coding	22918999,22911328,22909483,22906195,22905336,22905094,22904875,22904261,22902187,22901980,22901814,22900777	22919178,22911403,22909595,22906368,22905453,22905246,22905012,22904326,22902382,22902099,22901883,22901733	Gene ID= ENSG00000100461.17 TPM= 13.08 Transcript Type= protein_coding
chr14	22920529	22929395	22920529	22929395	-	transcript326.chr14.nic@PRMT5	transcript326.chr14.nic	protein_coding	22929252,22928497,22928126,22927526,22926702,22926506,22926133,22924879,22924632,22924479,22924270,22924008,22923051,22922742,22922443,22922176,22920840,22920529	22929395,22928615,22928211,22927660,22926814,22926555,22926296,22925040,22924709,22924537,22924392,22924183,22923160,22922835,22922559,22922240,22921056,22920731	Gene ID= ENSG00000100462.15 TPM= 2.92 Transcript Type= NA
chr14	22920525	22929401	22920525	22929401	-	ENST00000397441.6@PRMT5	ENST00000397441.6	protein_coding	22929167,22928497,22928126,22927526,22926702,22926506,22926133,22924879,22924632,22924479,22924270,22924008,22923051,22922742,22922443,22922176,22920525	22929401,22928615,22928211,22927660,22926814,22926555,22926296,22925040,22924709,22924537,22924392,22924183,22923160,22922835,22922559,22922240,22921056	Gene ID= ENSG00000100462.15 TPM= 5.25 Transcript Type= protein_coding
chr14	22920511	22929585	22920511	22929585	-	ENST00000324366.12@PRMT5	ENST00000324366.12	protein_coding	22929252,22928497,22928126,22927526,22926702,22926506,22926133,22924879,22924632,22924479,22924270,22924008,22923051,22922742,22922443,22922176,22920511	22929585,22928615,22928211,22927660,22926814,22926555,22926296,22925040,22924709,22924537,22924392,22924183,22923160,22922835,22922559,22922240,22921056	Gene ID= ENSG00000100462.15 TPM= 50.21 Transcript Type= protein_coding
chr14	22946236	22957133	22946236	22957133	-	transcript336.chr14.nic@HAUS4	transcript336.chr14.nic	protein_coding	22956746,22955100,22952541,22952328,22951555,22950314,22947868,22947601,22947171,22946236	22957133,22955176,22952683,22952459,22951689,22950410,22948013,22947731,22947239,22946708	Gene ID= ENSG00000092036.18 TPM= 11.09 Transcript Type= NA
chr14	22946229	22957142	22946229	22957142	-	ENST00000541587.5@HAUS4	ENST00000541587.5	protein_coding	22956916,22955100,22952541,22952328,22951555,22950314,22947868,22947601,22947171,22946229	22957142,22955176,22952683,22952459,22951689,22950410,22948013,22947731,22947239,22946708	Gene ID= ENSG00000092036.18 TPM= 51.96 Transcript Type= protein_coding
chr14	22951492	22957139	22951492	22957139	-	transcript345.chr14.nic@HAUS4	transcript345.chr14.nic	protein_coding	22956916,22955100,22952541,22952328,22951492	22957139,22955176,22952683,22952459,22951689	Gene ID= ENSG00000092036.18 TPM= 2.34 Transcript Type= NA
chr14	22946261	22957126	22946261	22957126	-	ENST00000555367.5@HAUS4	ENST00000555367.5	protein_coding	22956916,22955100,22952541,22952328,22950314,22947868,22947601,22947171,22946261	22957126,22955176,22952683,22952459,22950410,22948013,22947731,22947239,22946708	Gene ID= ENSG00000092036.18 TPM= 5.84 Transcript Type= protein_coding
chr14	22971174	22982642	22971174	22982642	-	ENST00000262713.6@AJUBA	ENST00000262713.6	protein_coding	22981261,22978344,22976645,22976456,22974974,22974839,22974047,22971174	22982642,22978445,22976712,22976518,22975104,22974890,22974115,22973568	Gene ID= ENSG00000129474.15 TPM= 8.17 Transcript Type= protein_coding
chr14	22971815	22977223	22971815	22977223	-	ENST00000397388.7@AJUBA	ENST00000397388.7	protein_coding	22976645,22976456,22974974,22974839,22974047,22971815	22977223,22976518,22975104,22974890,22974115,22973568	Gene ID= ENSG00000129474.15 TPM= 7.01 Transcript Type= protein_coding
chr14	23025851	23035145	23025851	23035145	-	ENST00000361611.10@PSMB5	ENST00000361611.10	protein_coding	23034684,23033368,23025851	23035145,23033674,23026375	Gene ID= ENSG00000100804.18 TPM= 105.67 Transcript Type= protein_coding
chr14	23025858	23034890	23025858	23034890	-	ENST00000493471.2@PSMB5	ENST00000493471.2	protein_coding	23034684,23033368,23027745,23025858	23034890,23033674,23027829,23026375	Gene ID= ENSG00000100804.18 TPM= 4.09 Transcript Type= protein_coding
chr14	23047067	23049174	23047067	23049174	-	transcript370.chr14.nic@CDH24	transcript370.chr14.nic	protein_coding	23047461,23047067	23049174,23047374	Gene ID= ENSG00000139880.19 TPM= 9.34 Transcript Type= NA
chr14	23047062	23057538	23047062	23057538	-	ENST00000487137.6@CDH24	ENST00000487137.6	protein_coding	23057403,23055533,23055059,23054747,23054506,23054141,23053496,23052473,23049822,23049627,23049027,23047461,23047062	23057538,23055857,23055353,23054866,23054673,23054328,23053749,23052609,23049943,23049738,23049275,23048479,23047374	Gene ID= ENSG00000139880.19 TPM= 5.84 Transcript Type= protein_coding
chr14	23058567	23095614	23058567	23095614	-	ENST00000262710.5@ACIN1	ENST00000262710.5	protein_coding	23094975,23093479,23090522,23089982,23081748,23079547,23078820,23078151,23069476,23065966,23064355,23064105,23063436,23062929,23062416,23062168,23061298,23061084,23058567	23095614,23093544,23090633,23090101,23081836,23080809,23079038,23078266,23069617,23066008,23064488,23064257,23063577,23063074,23062523,23062275,23061622,23061184,23059474	Gene ID= ENSG00000100813.14 TPM= 11.19 Transcript Type= protein_coding
chr14	23058567	23095614	23058567	23095614	-	ENST00000457657.5@ACIN1	ENST00000457657.5	protein_coding	23094975,23093479,23090522,23081748,23079547,23078820,23078151,23069476,23065966,23064355,23064105,23063436,23062929,23062416,23062168,23061298,23061084,23058567	23095614,23093544,23090633,23081836,23080809,23079038,23078266,23069617,23066008,23064488,23064257,23063577,23063074,23062523,23062275,23061622,23061184,23059474	Gene ID= ENSG00000100813.14 TPM= 8.85 Transcript Type= protein_coding
chr14	23058567	23071617	23058567	23071617	-	ENST00000357481.6@ACIN1	ENST00000357481.6	protein_coding	23071427,23071125,23069476,23065966,23064355,23064105,23063436,23062929,23062416,23062168,23061298,23061084,23058567	23071617,23071186,23069617,23066008,23064488,23064257,23063577,23063074,23062523,23062275,23061622,23061184,23059474	Gene ID= ENSG00000100813.14 TPM= 1.84 Transcript Type= protein_coding
chr14	23058564	23068741	23058564	23068741	-	transcript381.chr14.nnic@ACIN1	transcript381.chr14.nnic	protein_coding	23067304,23065966,23064355,23064105,23063436,23062929,23062416,23062168,23061298,23061084,23058564	23068741,23066008,23064488,23064257,23063577,23063074,23062523,23062275,23061622,23061184,23059474	Gene ID= ENSG00000100813.14 TPM= 5.25 Transcript Type= NA
chr14	23058564	23068528	23058564	23068528	-	transcript382.chr14.nic@ACIN1	transcript382.chr14.nic	protein_coding	23065966,23064355,23064105,23063436,23062929,23062416,23062168,23061298,23061084,23058564	23068528,23064488,23064257,23063577,23063074,23062523,23062275,23061622,23061184,23059474	Gene ID= ENSG00000100813.14 TPM= 6.42 Transcript Type= NA
chr14	23058564	23064909	23058564	23064909	-	transcript384.chr14.nic@ACIN1	transcript384.chr14.nic	protein_coding	23064355,23064105,23063436,23062929,23062416,23062168,23061298,23061084,23058564	23064909,23064221,23063577,23063074,23062523,23062275,23061622,23061184,23059474	Gene ID= ENSG00000100813.14 TPM= 13.04 Transcript Type= NA
chr14	23058564	23061993	23058564	23061993	-	transcript386.chr14.nic@ACIN1	transcript386.chr14.nic	protein_coding	23061298,23061084,23058564	23061993,23061184,23059474	Gene ID= ENSG00000100813.14 TPM= 11.09 Transcript Type= NA
chr14	23058567	23071561	23058567	23071561	-	ENST00000338631.10@ACIN1	ENST00000338631.10	protein_coding	23071427,23069476,23065966,23064355,23064105,23063436,23062929,23062416,23062168,23061298,23061084,23058567	23071561,23069617,23066008,23064488,23064257,23063577,23063074,23062523,23062275,23061622,23061184,23059474	Gene ID= ENSG00000100813.14 TPM= 8.85 Transcript Type= protein_coding
chr14	23094765	23100462	23094765	23100462	+	ENST00000319074.5@C14orf119	ENST00000319074.5	protein_coding	23094765,23097658	23095619,23100462	Gene ID= ENSG00000179933.5 TPM= 40.87 Transcript Type= protein_coding
chr14	23095503	23098489	23095503	23098489	+	transcript391.chr14.nnic@C14orf119	transcript391.chr14.nnic	protein_coding	23095503,23097658	23096021,23098489	Gene ID= ENSG00000179933.5 TPM= 3.5 Transcript Type= NA
chr14	23117304	23119616	23117304	23119616	-	ENST00000206513.5@CEBPE	ENST00000206513.5	protein_coding	23118582,23117304	23119616,23117822	Gene ID= ENSG00000092067.5 TPM= 1.17 Transcript Type= protein_coding
chr14	23125295	23183640	23125295	23183640	-	ENST00000316902.11@SLC7A8	ENST00000316902.11	protein_coding	23182764,23166336,23165285,23143079,23140471,23139424,23137921,23131461,23129650,23128019,23125295	23183640,23166540,23165436,23143204,23140624,23139547,23138024,23131557,23129799,23128196,23127343	Gene ID= ENSG00000092068.19 TPM= 7.39 Transcript Type= protein_coding
chr14	23125299	23183158	23125299	23183158	-	transcript402.chr14.nnic@SLC7A8	transcript402.chr14.nnic	protein_coding	23182764,23166336,23165285,23143079,23140471,23131461,23129650,23128019,23125299	23183158,23166542,23165436,23143204,23140626,23131557,23129799,23128198,23127345	Gene ID= ENSG00000092068.19 TPM= 12.06 Transcript Type= NA
chr14	23125302	23183641	23125302	23183641	-	ENST00000469263.5@SLC7A8	ENST00000469263.5	protein_coding	23182764,23166336,23165285,23143079,23140471,23125302	23183641,23166540,23165436,23143204,23140624,23127343	Gene ID= ENSG00000092068.19 TPM= 3.89 Transcript Type= protein_coding
chr14	23299915	23302436	23299915	23302436	-	transcript434.chr14.nic@PPP1R3E	transcript434.chr14.nic	protein_coding	23302160,23299915	23302436,23301858	Gene ID= ENSG00000235194.8 TPM= 5.84 Transcript Type= NA
chr14	23306874	23311759	23306874	23311759	+	transcript429.chr14.nic@BCL2L2	transcript429.chr14.nic	protein_coding	23306874,23307192,23307760,23308816	23306941,23307279,23308199,23311759	Gene ID= ENSG00000129473.9 TPM= 3.5 Transcript Type= NA
chr14	23306762	23311759	23306762	23311759	+	ENST00000250405.9@BCL2L2	ENST00000250405.9	protein_coding	23306762,23307192,23307760,23308816	23306894,23307279,23308199,23311759	Gene ID= ENSG00000129473.9 TPM= 57.21 Transcript Type= protein_coding
chr14	23321289	23326185	23321289	23326185	+	ENST00000216727.8@PABPN1	ENST00000216727.8	protein_coding	23321289,23322181,23322999,23323377,23323965,23324138,23325247	23321820,23322295,23323066,23323483,23324052,23324289,23326185	Gene ID= ENSG00000100836.10 TPM= 44.37 Transcript Type= protein_coding
chr14	23321457	23326163	23321457	23326163	+	ENST00000397276.6@PABPN1	ENST00000397276.6	protein_coding	23321457,23322181,23322999,23323377,23323965,23324138	23321820,23322295,23323066,23323483,23324052,23326163	Gene ID= ENSG00000100836.10 TPM= 25.69 Transcript Type= protein_coding
chr14	23346311	23352920	23346311	23352920	-	transcript440.chr14.nnic@SLC22A17	transcript440.chr14.nnic	protein_coding	23352646,23351948,23351752,23349272,23348506,23348161,23346311	23352920,23352451,23351855,23349426,23348671,23348306,23346936	Gene ID= ENSG00000092096.16 TPM= 10.51 Transcript Type= NA
chr14	23346306	23352741	23346306	23352741	-	ENST00000354772.8@SLC22A17	ENST00000354772.8	protein_coding	23352646,23351948,23351752,23349272,23348506,23348161,23347891,23347514,23347101,23346306	23352741,23352451,23351855,23349426,23348671,23348306,23347996,23347731,23347212,23346936	Gene ID= ENSG00000092096.16 TPM= 16.35 Transcript Type= protein_coding
chr14	23362919	23365209	23362919	23365209	-	transcript447.chr14.nnic@NA	transcript447.chr14.nnic	NA	23362919	23365209	Gene ID= novel_gene_chr14_448 TPM= 2.34 Transcript Type= NA
chr14	23377047	23379771	23377047	23379771	+	ENST00000553750.1@CMTM5	ENST00000553750.1	protein_coding	23377047,23379031,23379299,23379474	23378501,23379123,23379383,23379771	Gene ID= ENSG00000166091.19 TPM= 1.17 Transcript Type= retained_intron
chr14	23469688	23478193	23469688	23478193	+	ENST00000408901.7@NGDN	ENST00000408901.7	protein_coding	23469688,23470042,23470906,23475171,23475558,23475726,23476029,23476239,23477200,23477503,23478007	23469727,23470101,23470977,23475308,23475642,23475778,23476152,23476407,23477356,23477560,23478193	Gene ID= ENSG00000129460.15 TPM= 64.22 Transcript Type= protein_coding
chr14	23469688	23478178	23469688	23478178	+	transcript454.chr14.nic@NGDN	transcript454.chr14.nic	protein_coding	23469688,23470042,23470906,23475171,23476239,23477200,23478007	23469727,23470101,23470977,23476152,23476407,23477560,23478178	Gene ID= ENSG00000129460.15 TPM= 2.34 Transcript Type= NA
chr14	23469688	23478178	23469688	23478178	+	transcript455.chr14.nic@NGDN	transcript455.chr14.nic	protein_coding	23469688,23470042,23470906,23475171,23476239,23477503,23478007	23469727,23470101,23470977,23476152,23477356,23477560,23478178	Gene ID= ENSG00000129460.15 TPM= 4.67 Transcript Type= NA
chr14	23556022	23560271	23556022	23560271	+	ENST00000288014.6@THTPA	ENST00000288014.6	protein_coding	23556022,23558695	23557304,23560271	Gene ID= ENSG00000259431.5 TPM= 5.84 Transcript Type= protein_coding
chr14	23556007	23559574	23556007	23559574	+	ENST00000404535.3@THTPA	ENST00000404535.3	protein_coding	23556007,23556743,23558695	23556343,23557304,23559574	Gene ID= ENSG00000259431.5 TPM= 5.84 Transcript Type= protein_coding
chr14	23556313	23559579	23556313	23559579	+	transcript537.chr14.nnic@NA	transcript537.chr14.nnic	NA	23556313	23559579	Gene ID= novel_gene_chr14_538 TPM= 2.34 Transcript Type= NA
chr14	23559567	23567792	23559567	23567792	-	transcript469.chr14.nic@AP1G2	transcript469.chr14.nic	protein_coding	23567597,23567111,23566562,23566278,23566064,23565816,23565606,23565119,23564562,23564333,23564046,23563716,23563584,23563380,23562504,23562288,23561962,23561512,23561296,23560255,23559938,23559567	23567792,23567319,23566686,23566419,23566160,23565892,23565701,23565199,23564660,23564388,23564159,23563856,23563638,23563502,23562593,23562415,23562066,23561635,23561431,23560418,23560036,23559850	Gene ID= ENSG00000213983.11 TPM= 4.43 Transcript Type= NA
chr14	23559567	23567839	23559567	23567839	-	transcript485.chr14.nic@AP1G2	transcript485.chr14.nic	protein_coding	23567739,23567111,23566562,23566278,23566064,23565816,23565606,23565119,23564562,23564333,23563716,23563584,23563380,23562504,23562288,23561962,23561512,23561296,23560255,23559938,23559567	23567839,23567319,23566686,23566419,23566160,23565892,23565701,23565199,23564660,23564388,23564221,23563638,23563502,23562593,23562415,23562066,23561635,23561431,23560418,23560036,23559850	Gene ID= ENSG00000213983.11 TPM= 12.89 Transcript Type= NA
chr14	23559567	23567788	23559567	23567788	-	transcript492.chr14.nic@AP1G2	transcript492.chr14.nic	protein_coding	23567739,23567111,23566562,23566278,23565606,23565119,23564562,23564333,23564046,23563716,23563584,23563380,23562504,23562288,23561962,23561512,23561296,23560255,23559938,23559567	23567788,23567319,23566686,23566419,23566160,23565199,23564660,23564388,23564159,23563856,23563638,23563502,23562593,23562415,23562066,23561635,23561431,23560418,23560036,23559850	Gene ID= ENSG00000213983.11 TPM= 5.21 Transcript Type= NA
chr14	23559567	23567839	23559567	23567839	-	transcript497.chr14.nic@AP1G2	transcript497.chr14.nic	protein_coding	23567739,23567111,23566562,23566278,23566064,23565606,23565119,23564562,23564333,23563716,23563584,23563380,23562504,23562288,23561962,23561512,23561296,23560255,23559938,23559567	23567839,23567319,23566686,23566419,23566160,23565701,23565199,23564660,23564388,23564221,23563638,23563502,23562593,23562415,23562066,23561635,23561431,23560418,23560036,23559850	Gene ID= ENSG00000213983.11 TPM= 7.64 Transcript Type= NA
chr14	23559568	23567803	23559568	23567803	-	ENST00000397120.7@AP1G2	ENST00000397120.7	protein_coding	23567739,23567111,23566562,23566278,23566064,23565816,23565606,23565119,23564562,23564333,23564046,23563716,23563584,23563380,23562504,23562288,23561962,23561512,23561296,23560255,23559938,23559568	23567803,23567319,23566686,23566419,23566160,23565892,23565701,23565199,23564660,23564388,23564159,23563856,23563638,23563502,23562593,23562415,23562066,23561635,23561431,23560418,23560036,23559850	Gene ID= ENSG00000213983.11 TPM= 34.78 Transcript Type= protein_coding
chr14	23559565	23568070	23559565	23568070	-	ENST00000308724.9@AP1G2	ENST00000308724.9	protein_coding	23567111,23566562,23566278,23566064,23565816,23565606,23565119,23564562,23564333,23564046,23563716,23563584,23563380,23562504,23562288,23561962,23561512,23561296,23560255,23559938,23559565	23568070,23566686,23566419,23566160,23565892,23565701,23565199,23564660,23564388,23564159,23563856,23563638,23563502,23562593,23562415,23562066,23561635,23561431,23560418,23560036,23559850	Gene ID= ENSG00000213983.11 TPM= 3.26 Transcript Type= protein_coding
chr14	23565841	23568071	23565841	23568071	+	transcript539.chr14.nnic@NA	transcript539.chr14.nnic	NA	23565841	23568071	Gene ID= novel_gene_chr14_540 TPM= 2.34 Transcript Type= NA
chr14	23568038	23577582	23568038	23577582	-	transcript526.chr14.nic@JPH4	transcript526.chr14.nic	protein_coding	23577075,23575685,23571802,23570928,23568038	23577582,23576456,23571920,23571460,23569717	Gene ID= ENSG00000092051.16 TPM= 4.67 Transcript Type= NA
chr14	23612501	23629883	23612501	23629883	+	transcript543.chr14.nnic@AL135999.3	transcript543.chr14.nnic	lincRNA	23612501,23612715,23619203,23626591,23627013,23627657,23628843	23612609,23612860,23619351,23626652,23627295,23627778,23629883	Gene ID= ENSG00000274002.1 TPM= 2.34 Transcript Type= NA
chr14	23612501	23629880	23612501	23629880	+	transcript546.chr14.nnic@AL135999.3	transcript546.chr14.nnic	lincRNA	23612501,23612715,23619203,23626591,23627013	23612609,23612860,23619351,23626652,23629880	Gene ID= ENSG00000274002.1 TPM= 4.67 Transcript Type= NA
chr14	23612501	23620012	23612501	23620012	+	transcript547.chr14.nnic@AL135999.3	transcript547.chr14.nnic	lincRNA	23612501,23612715,23619203	23612609,23612860,23620012	Gene ID= ENSG00000274002.1 TPM= 4.67 Transcript Type= NA
chr14	23938731	23954197	23938731	23954197	-	ENST00000556379.1@DHRS4-AS1	ENST00000556379.1	antisense_RNA	23953774,23938731	23954197,23941158	Gene ID= ENSG00000215256.3 TPM= 3.5 Transcript Type= antisense_RNA
chr14	23939613	23954166	23939613	23954166	-	ENST00000555045.1@DHRS4-AS1	ENST00000555045.1	antisense_RNA	23954125,23953774,23939613	23954166,23954033,23941158	Gene ID= ENSG00000215256.3 TPM= 2.34 Transcript Type= antisense_RNA
chr14	23953586	23969274	23953586	23969274	+	ENST00000313250.9@DHRS4	ENST00000313250.9	protein_coding	23953586,23955035,23959902,23965762,23965932,23966283,23967211,23968757	23953916,23955212,23960003,23965832,23965983,23966417,23967266,23969274	Gene ID= ENSG00000157326.18 TPM= 15.18 Transcript Type= protein_coding
chr14	23953762	24006401	23953762	24006401	+	transcript555.chr14.nnic@DHRS4	transcript555.chr14.nnic	protein_coding	23953762,23955035,23959902,24004337,24005886	23953916,23955212,23960003,24004392,24006401	Gene ID= ENSG00000157326.18 TPM= 6.04 Transcript Type= NA
chr14	23953736	23964963	23953736	23964963	+	transcript557.chr14.nnic@DHRS4	transcript557.chr14.nnic	protein_coding	23953736,23955035,23959902,23964578	23953916,23955212,23960003,23964963	Gene ID= ENSG00000157326.18 TPM= 3.5 Transcript Type= NA
chr14	23988818	24006408	23988818	24006408	+	ENST00000397071.5@DHRS4L2	ENST00000397071.5	protein_coding	23988818,23990182,23995032,24004337,24005886	23989075,23990359,23995133,24004392,24006408	Gene ID= ENSG00000187630.15 TPM= 15.96 Transcript Type= protein_coding
chr14	23953764	24006401	23953764	24006401	+	transcript558.chr14.nnic@DHRS4L2	transcript558.chr14.nnic	protein_coding	23953764,23955035,24004337,24005886	23953916,23955212,24004392,24006401	Gene ID= ENSG00000187630.15 TPM= 3.7 Transcript Type= NA
chr14	24094079	24104124	24094079	24104124	+	transcript608.chr14.nic@PCK2	transcript608.chr14.nic	protein_coding	24094079,24096892,24098203,24098475,24099049,24099558,24099995,24102753,24103160,24103510	24094133,24097137,24098387,24098678,24099236,24099720,24100213,24102890,24103255,24104124	Gene ID= ENSG00000100889.11 TPM= 3.5 Transcript Type= NA
chr14	24094173	24104124	24094173	24104124	+	transcript609.chr14.nic@PCK2	transcript609.chr14.nic	protein_coding	24094173,24096892,24098203,24098475,24099049,24099558,24099995,24102753,24103160,24103510	24094254,24097137,24098387,24098678,24099236,24099720,24100213,24102890,24103255,24104124	Gene ID= ENSG00000100889.11 TPM= 3.5 Transcript Type= NA
chr14	24094138	24104130	24094138	24104130	+	ENST00000216780.8@PCK2	ENST00000216780.8	protein_coding	24094138,24096892,24098203,24098475,24099049,24099558,24099995,24102753,24103160,24103510	24094434,24097137,24098387,24098678,24099236,24099720,24100213,24102890,24103255,24104130	Gene ID= ENSG00000100889.11 TPM= 60.71 Transcript Type= protein_coding
chr14	24094281	24104125	24094281	24104125	+	transcript612.chr14.nic@PCK2	transcript612.chr14.nic	protein_coding	24094281,24096892,24098203,24098475,24099049,24099558,24099995,24102753,24103160,24103842	24094434,24097137,24098387,24098678,24099236,24099720,24100213,24102890,24103255,24104125	Gene ID= ENSG00000100889.11 TPM= 5.84 Transcript Type= NA
chr14	24094561	24104124	24094561	24104124	+	transcript615.chr14.nic@PCK2	transcript615.chr14.nic	protein_coding	24094561,24096892,24098203,24098475,24099049,24099558,24099995,24102753,24103160,24103510	24095378,24097137,24098387,24098678,24099236,24099720,24100213,24102890,24103255,24104124	Gene ID= ENSG00000100889.11 TPM= 3.5 Transcript Type= NA
chr14	24094159	24100562	24094159	24100562	+	ENST00000396973.8@PCK2	ENST00000396973.8	protein_coding	24094159,24096892,24098203,24098475,24099049,24099558,24099995	24094434,24097137,24098387,24098678,24099236,24099720,24100562	Gene ID= ENSG00000100889.11 TPM= 1.17 Transcript Type= protein_coding
chr14	24114627	24124029	24114627	24124029	+	ENST00000559115.5@DCAF11	ENST00000559115.5	protein_coding	24114627,24115543,24116917,24117266,24117668,24118055,24118388,24118750,24119145,24119559,24119711,24120838,24121365,24122971,24123175	24114924,24115749,24117044,24117393,24117732,24118155,24118534,24118804,24119213,24119616,24119896,24120991,24121517,24123077,24124029	Gene ID= ENSG00000100897.17 TPM= 13.63 Transcript Type= protein_coding
chr14	24115206	24124029	24115206	24124029	+	transcript590.chr14.nic@DCAF11	transcript590.chr14.nic	protein_coding	24115206,24115543,24116917,24117266,24117668,24118055,24118388,24118750,24119145,24119559,24119711,24120838,24121365,24122971,24123175	24115293,24115749,24117044,24117393,24117732,24118155,24118534,24118804,24119213,24119616,24119896,24120991,24121517,24123077,24124029	Gene ID= ENSG00000100897.17 TPM= 5.45 Transcript Type= NA
chr14	24115276	24124029	24115276	24124029	+	transcript594.chr14.nic@DCAF11	transcript594.chr14.nic	protein_coding	24115276,24116917,24117266,24117668,24118055,24118388,24118750,24119145,24119559,24119711,24120838,24121365,24122971,24123175	24115749,24117044,24117393,24117732,24118155,24118534,24118804,24119213,24119616,24119896,24120991,24121517,24123077,24124029	Gene ID= ENSG00000100897.17 TPM= 6.62 Transcript Type= NA
chr14	24114780	24125240	24114780	24125240	+	ENST00000446197.7@DCAF11	ENST00000446197.7	protein_coding	24114780,24115382,24116917,24117266,24117668,24118055,24118388,24118750,24119145,24119559,24119711,24120838,24121365,24122971,24123175	24115293,24115749,24117044,24117393,24117732,24118155,24118534,24118804,24119213,24119616,24119896,24120991,24121517,24123077,24125240	Gene ID= ENSG00000100897.17 TPM= 19.85 Transcript Type= protein_coding
chr14	24115275	24124029	24115275	24124029	+	ENST00000326009.9@DCAF11	ENST00000326009.9	protein_coding	24115275,24115382,24116917,24117266,24117668,24118055,24118388,24118750,24119145,24119559,24119711,24120838,24121365,24122971,24123175	24115293,24115726,24117044,24117393,24117732,24118155,24118534,24118804,24119213,24119616,24119896,24120991,24121517,24123077,24124029	Gene ID= ENSG00000100897.17 TPM= 17.51 Transcript Type= nonsense_mediated_decay
chr14	24136158	24138967	24136158	24138967	+	ENST00000206451.10@PSME1	ENST00000206451.10	protein_coding	24136158,24136985,24137143,24137321,24137520,24137700,24138049,24138196,24138345,24138474,24138736	24136301,24137017,24137205,24137431,24137565,24137797,24138117,24138263,24138399,24138560,24138967	Gene ID= ENSG00000092010.14 TPM= 347.94 Transcript Type= protein_coding
chr14	24136200	24138964	24136200	24138964	+	ENST00000382708.7@PSME1	ENST00000382708.7	protein_coding	24136200,24136985,24137143,24137321,24137520,24137700,24138049,24138196,24138345,24138474	24136301,24137017,24137205,24137431,24137565,24137797,24138117,24138263,24138399,24138964	Gene ID= ENSG00000092010.14 TPM= 8.17 Transcript Type= protein_coding
chr14	24138965	24141588	24138965	24141588	-	ENST00000216799.8@EMC9	ENST00000216799.8	protein_coding	24141438,24141107,24140889,24139545,24139360,24138965	24141588,24141316,24140965,24139614,24139454,24139196	Gene ID= ENSG00000100908.13 TPM= 1.75 Transcript Type= protein_coding
chr14	24138965	24141585	24138965	24141585	-	ENST00000419198.6@EMC9	ENST00000419198.6	protein_coding	24141107,24140889,24139545,24139360,24138965	24141585,24140965,24139614,24139454,24139196	Gene ID= ENSG00000100908.13 TPM= 4.09 Transcript Type= protein_coding
chr14	24143365	24147276	24143365	24147276	-	transcript623.chr14.nic@PSME2	transcript623.chr14.nic	protein_coding	24146534,24145710,24145379,24145243,24145058,24144400,24144192,24143975,24143585,24143365	24147276,24146240,24145465,24145273,24145155,24144468,24144259,24144029,24143671,24143489	Gene ID= ENSG00000100911.15 TPM= 8.96 Transcript Type= NA
chr14	24143365	24146608	24143365	24146608	-	transcript634.chr14.nic@PSME2	transcript634.chr14.nic	protein_coding	24146534,24145710,24145379,24144400,24144192,24143975,24143585,24143365	24146608,24146240,24145465,24145273,24144259,24144029,24143671,24143489	Gene ID= ENSG00000100911.15 TPM= 5.06 Transcript Type= NA
chr14	24143405	24147235	24143405	24147235	-	ENST00000558273.5@PSME2	ENST00000558273.5	protein_coding	24146534,24146208,24145710,24145379,24145243,24145058,24144400,24144192,24143975,24143585,24143405	24147235,24146240,24145896,24145465,24145273,24145155,24144468,24144259,24144029,24143671,24143489	Gene ID= ENSG00000100911.15 TPM= 9.73 Transcript Type= nonsense_mediated_decay
chr14	24143365	24147221	24143365	24147221	-	ENST00000216802.9@PSME2	ENST00000216802.9	protein_coding	24146534,24146208,24145710,24145379,24145243,24145058,24144400,24144192,24143975,24143585,24143365	24147221,24146240,24145772,24145465,24145273,24145155,24144468,24144259,24144029,24143671,24143489	Gene ID= ENSG00000100911.15 TPM= 111.7 Transcript Type= protein_coding
chr14	24143382	24146238	24143382	24146238	-	ENST00000559453.5@PSME2	ENST00000559453.5	protein_coding	24145710,24145379,24145243,24144400,24144192,24143975,24143585,24143382	24146238,24145465,24145273,24145155,24144259,24144029,24143671,24143489	Gene ID= ENSG00000100911.15 TPM= 1.17 Transcript Type= retained_intron
chr14	24161243	24166565	24161243	24166565	+	transcript682.chr14.nic@AL136295.5	transcript682.chr14.nic	protein_coding	24161243,24162144,24162966,24163378,24163878,24164063,24166122	24161338,24162324,24163149,24163508,24163959,24165962,24166565	Gene ID= ENSG00000259529.1 TPM= 5.84 Transcript Type= NA
chr14	24161243	24166565	24161243	24166565	+	transcript660.chr14.nic@IRF9	transcript660.chr14.nic	protein_coding	24161243,24162144,24162966,24163378,24163878,24164063,24164614,24165057,24165847,24166122	24161338,24162324,24163149,24163508,24163959,24164134,24164955,24165183,24165962,24166565	Gene ID= ENSG00000213928.8 TPM= 4.9 Transcript Type= NA
chr14	24161243	24166565	24161243	24166565	+	transcript661.chr14.nic@IRF9	transcript661.chr14.nic	protein_coding	24161243,24162144,24162966,24163378,24163878,24164063,24164614,24165847,24166122	24161338,24162280,24163149,24163508,24163959,24164134,24164955,24165962,24166565	Gene ID= ENSG00000213928.8 TPM= 8.02 Transcript Type= NA
chr14	24161053	24166565	24161053	24166565	+	ENST00000396864.7@IRF9	ENST00000396864.7	protein_coding	24161053,24162144,24162966,24163378,24163878,24164063,24164614,24165847,24166122	24161338,24162324,24163149,24163508,24163959,24164134,24164955,24165962,24166565	Gene ID= ENSG00000213928.8 TPM= 94.42 Transcript Type= protein_coding
chr14	24161243	24166565	24161243	24166565	+	transcript675.chr14.nic@IRF9	transcript675.chr14.nic	protein_coding	24161243,24162144,24162966,24163378,24163878,24164063,24165847,24166122	24161338,24162324,24163149,24163508,24163959,24164134,24165962,24166565	Gene ID= ENSG00000213928.8 TPM= 4.9 Transcript Type= NA
chr14	24161290	24166254	24161290	24166254	+	ENST00000561415.1@IRF9	ENST00000561415.1	protein_coding	24161290,24162144,24162966,24163378,24163878,24164063,24165847,24166122	24161338,24162324,24163149,24163508,24163959,24164955,24165962,24166254	Gene ID= ENSG00000213928.8 TPM= 3.5 Transcript Type= retained_intron
chr14	24172135	24180254	24172135	24180254	+	ENST00000619469.4@REC8	ENST00000619469.4	protein_coding	24172135,24172713,24172899,24173126,24173291,24175543,24176822,24177141,24177353,24177465,24178606,24178777,24179085,24179397,24179595,24179800,24180010	24172608,24172781,24173041,24173198,24173411,24175624,24176901,24177222,24177383,24178222,24178672,24178916,24179133,24179463,24179726,24179906,24180254	Gene ID= ENSG00000100918.12 TPM= 1.75 Transcript Type= retained_intron
chr14	24172025	24180254	24172025	24180254	+	ENST00000611366.4@REC8	ENST00000611366.4	protein_coding	24172025,24172713,24172899,24173126,24173291,24175543,24176822,24177141,24177353,24177465,24177709,24178091,24178606,24178777,24179085,24179397,24179595,24179800,24180010	24172608,24172781,24173041,24173198,24173411,24175624,24176901,24177222,24177383,24177541,24177758,24178222,24178672,24178916,24179133,24179463,24179726,24179906,24180254	Gene ID= ENSG00000100918.12 TPM= 5.25 Transcript Type= protein_coding
chr14	24180219	24188964	24180219	24188964	-	ENST00000354464.10@IPO4	ENST00000354464.10	protein_coding	24188719,24188552,24188344,24188216,24187667,24187400,24187085,24186878,24186708,24186287,24186129,24185861,24185459,24185183,24184867,24184650,24184298,24183998,24183783,24183590,24183456,24183250,24182976,24182792,24182278,24181955,24181711,24181513,24180689,24180219	24188964,24188638,24188423,24188257,24187796,24187579,24187150,24186979,24186791,24186451,24186182,24185970,24185567,24185312,24184980,24184763,24184418,24184109,24183898,24183667,24183513,24183355,24183169,24182842,24182403,24182163,24181843,24181617,24180758,24180572	Gene ID= ENSG00000196497.16 TPM= 51.37 Transcript Type= protein_coding
chr14	24180226	24188815	24180226	24188815	-	transcript653.chr14.nic@IPO4	transcript653.chr14.nic	protein_coding	24188719,24188552,24188344,24188216,24187400,24187085,24186878,24186708,24186287,24186129,24185861,24185459,24185183,24184867,24184650,24184298,24183998,24183783,24183590,24183456,24183250,24182976,24182792,24182278,24181955,24181711,24181513,24180689,24180226	24188815,24188638,24188423,24188257,24187579,24187150,24186979,24186791,24186451,24186182,24185970,24185567,24185312,24184980,24184763,24184418,24184109,24183898,24183667,24183513,24183355,24183169,24182842,24182403,24182163,24181843,24181617,24180758,24180572	Gene ID= ENSG00000196497.16 TPM= 7.01 Transcript Type= NA
chr14	24180219	24188822	24180219	24188822	-	ENST00000561090.5@IPO4	ENST00000561090.5	protein_coding	24188719,24188344,24188216,24187667,24187400,24187085,24186878,24186708,24186287,24186129,24185861,24185459,24185183,24184867,24184650,24184298,24183998,24183783,24183590,24183456,24183250,24182976,24182792,24182278,24181955,24181711,24181513,24180689,24180219	24188822,24188638,24188257,24187796,24187579,24187150,24186979,24186791,24186451,24186182,24185970,24185567,24185312,24184980,24184763,24184418,24184109,24183898,24183667,24183513,24183355,24183169,24182842,24182403,24182163,24181843,24181617,24180758,24180572	Gene ID= ENSG00000196497.16 TPM= 11.68 Transcript Type= retained_intron
chr14	24189143	24195675	24189143	24195675	-	transcript696.chr14.nic@TM9SF1	transcript696.chr14.nic	protein_coding	24195309,24194675,24192648,24192171,24190380,24189143	24195675,24195036,24193269,24192356,24190653,24189808	Gene ID= ENSG00000100926.14 TPM= 16.84 Transcript Type= NA
chr14	24189143	24195687	24189143	24195687	-	ENST00000261789.8@TM9SF1	ENST00000261789.8	protein_coding	24195346,24194675,24192648,24192171,24190380,24189143	24195687,24195036,24193269,24192356,24190653,24189808	Gene ID= ENSG00000100926.14 TPM= 123.09 Transcript Type= protein_coding
chr14	24190852	24195708	24190852	24195708	-	transcript707.chr14.nic@TM9SF1	transcript707.chr14.nic	protein_coding	24195346,24194675,24192648,24190852	24195708,24195036,24193269,24192356	Gene ID= ENSG00000100926.14 TPM= 7.79 Transcript Type= NA
chr14	24190852	24195708	24190852	24195708	-	transcript710.chr14.nic@TM9SF1	transcript710.chr14.nic	protein_coding	24195346,24194675,24190852	24195708,24195036,24193269	Gene ID= ENSG00000100926.14 TPM= 13.43 Transcript Type= NA
chr14	24190042	24195618	24190042	24195618	-	ENST00000396854.8@TM9SF1	ENST00000396854.8	protein_coding	24195346,24194675,24192648,24192171,24190042	24195618,24195036,24193269,24192356,24190653	Gene ID= ENSG00000100926.14 TPM= 3.93 Transcript Type= protein_coding
chr14	24201611	24205360	24201611	24205360	-	transcript742.chr14.nnic@NA	transcript742.chr14.nnic	NA	24201611	24205360	Gene ID= novel_gene_chr14_743 TPM= 2.34 Transcript Type= NA
chr14	24209583	24213869	24209583	24213869	-	ENST00000347519.10@CHMP4A	ENST00000347519.10	protein_coding	24213409,24211680,24211415,24210654,24210348,24209583	24213869,24211829,24211592,24210768,24210483,24209935	Gene ID= ENSG00000254505.9 TPM= 74.73 Transcript Type= protein_coding
chr14	24209860	24213488	24209860	24213488	-	ENST00000609024.5@CHMP4A	ENST00000609024.5	protein_coding	24213409,24211680,24211415,24210654,24210348,24209860	24213488,24211829,24211592,24210768,24210483,24209935	Gene ID= ENSG00000254505.9 TPM= 7.01 Transcript Type= protein_coding
chr14	24209624	24213497	24209624	24213497	-	transcript729.chr14.nnic@AL096870.2	transcript729.chr14.nnic	processed_transcript	24213409,24211680,24211411,24210348,24209624	24213497,24211829,24211592,24210483,24209935	Gene ID= ENSG00000260669.2 TPM= 2.34 Transcript Type= NA
chr14	24213937	24216067	24213937	24216067	-	ENST00000288087.11@MDP1	ENST00000288087.11	protein_coding	24215919,24215737,24215552,24214492,24214310,24213937	24216067,24215797,24215662,24214599,24214395,24214151	Gene ID= ENSG00000213920.8 TPM= 12.84 Transcript Type= protein_coding
chr14	24216852	24232454	24216852	24232454	-	ENST00000250495.9@NEDD8	ENST00000250495.9	protein_coding	24232250,24218384,24218133,24216852	24232454,24218431,24218215,24217223	Gene ID= ENSG00000129559.12 TPM= 60.71 Transcript Type= protein_coding
chr14	24216866	24232325	24216866	24232325	-	ENST00000531430.5@NEDD8	ENST00000531430.5	protein_coding	24232250,24231652,24218384,24218133,24216866	24232325,24231737,24218431,24218215,24217223	Gene ID= ENSG00000129559.12 TPM= 4.67 Transcript Type= processed_transcript
chr14	24232433	24239242	24232433	24239242	+	transcript746.chr14.nic@GMPR2	transcript746.chr14.nic	protein_coding	24232433,24233219,24233479,24234107,24235737,24235967,24237071,24237245,24237520,24238246,24238589	24232788,24233340,24233598,24234241,24235820,24236140,24237152,24237351,24237562,24238405,24239242	Gene ID= ENSG00000100938.17 TPM= 4.06 Transcript Type= NA
chr14	24232885	24239242	24232885	24239242	+	transcript747.chr14.nic@GMPR2	transcript747.chr14.nic	protein_coding	24232885,24233219,24233479,24234107,24235737,24235967,24237071,24237245,24237520,24238246,24238589	24232977,24233340,24233598,24234241,24235820,24236140,24237152,24237351,24237562,24238405,24239242	Gene ID= ENSG00000100938.17 TPM= 2.9 Transcript Type= NA
chr14	24232872	24239242	24232872	24239242	+	ENST00000399440.6@GMPR2	ENST00000399440.6	protein_coding	24232872,24233219,24233479,24235737,24235967,24237071,24237245,24237520,24238246,24238589	24232977,24233340,24233598,24235820,24236140,24237152,24237351,24237562,24238405,24239242	Gene ID= ENSG00000100938.17 TPM= 26.54 Transcript Type= protein_coding
chr14	24232433	24239237	24232433	24239237	+	transcript763.chr14.nic@GMPR2	transcript763.chr14.nic	protein_coding	24232433,24233219,24233479,24235737,24235967,24237071,24237245,24237520	24232788,24233340,24233598,24235820,24236140,24237152,24237351,24239237	Gene ID= ENSG00000100938.17 TPM= 2.34 Transcript Type= NA
chr14	24232422	24239242	24232422	24239242	+	ENST00000355299.8@GMPR2	ENST00000355299.8	protein_coding	24232422,24233219,24233479,24235737,24235967,24237071,24237245,24237520,24238246,24238589	24232847,24233340,24233598,24235820,24236140,24237152,24237351,24237562,24238405,24239242	Gene ID= ENSG00000100938.17 TPM= 12.53 Transcript Type= protein_coding
chr14	24232442	24239242	24232442	24239242	+	ENST00000559836.5@GMPR2	ENST00000559836.5	protein_coding	24232442,24233219,24233479,24235737,24235967,24237071,24237245,24237520,24238246,24238589	24232788,24233340,24233598,24235820,24236140,24237152,24237351,24237562,24238405,24239242	Gene ID= ENSG00000100938.17 TPM= 23.04 Transcript Type= protein_coding
chr14	24232901	24239242	24232901	24239242	+	ENST00000420554.6@GMPR2	ENST00000420554.6	protein_coding	24232901,24233479,24235737,24235967,24237071,24237245,24237520,24238246,24238589	24233340,24233598,24235820,24236140,24237152,24237351,24237562,24238405,24239242	Gene ID= ENSG00000100938.17 TPM= 10.19 Transcript Type= protein_coding
chr14	24232948	24239234	24232948	24239234	+	ENST00000456667.7@GMPR2	ENST00000456667.7	protein_coding	24232948,24233219,24233479,24235967,24237071,24237245,24237520,24238246,24238589	24232977,24233340,24233598,24236140,24237152,24237351,24237562,24238405,24239234	Gene ID= ENSG00000100938.17 TPM= 1.33 Transcript Type= protein_coding
chr14	24239643	24242674	24239643	24242674	-	ENST00000267415.11@TINF2	ENST00000267415.11	protein_coding	24242141,24241890,24241675,24241204,24241020,24240419,24240263,24240064,24239643	24242674,24241994,24241776,24241311,24241116,24240875,24240330,24240155,24239931	Gene ID= ENSG00000092330.15 TPM= 4.67 Transcript Type= protein_coding
chr14	24239643	24242666	24239643	24242666	-	transcript765.chr14.nic@TINF2	transcript765.chr14.nic	protein_coding	24242141,24241890,24241675,24241204,24241020,24240419,24240263,24239643	24242666,24241994,24241776,24241311,24241116,24240875,24240330,24240155	Gene ID= ENSG00000092330.15 TPM= 3.74 Transcript Type= NA
chr14	24239643	24242663	24239643	24242663	-	ENST00000399423.8@TINF2	ENST00000399423.8	protein_coding	24242141,24241890,24241675,24241204,24241020,24239643	24242663,24241994,24241776,24241311,24241116,24240875	Gene ID= ENSG00000092330.15 TPM= 113.88 Transcript Type= protein_coding
chr14	24239643	24242666	24239643	24242666	-	transcript775.chr14.nic@TINF2	transcript775.chr14.nic	protein_coding	24242141,24241890,24241675,24241020,24239643	24242666,24241994,24241776,24241311,24240875	Gene ID= ENSG00000092330.15 TPM= 4.12 Transcript Type= NA
chr14	24239682	24242613	24239682	24242613	-	ENST00000558566.1@TINF2	ENST00000558566.1	protein_coding	24242141,24241890,24241675,24239682	24242613,24241994,24241776,24240875	Gene ID= ENSG00000092330.15 TPM= 3.5 Transcript Type= protein_coding
chr14	24249114	24259421	24249114	24259421	-	transcript782.chr14.nic@TGM1	transcript782.chr14.nic	protein_coding	24259075,24258535,24258285,24255989,24255364,24254972,24254664,24254152,24249114	24259421,24258673,24258388,24256077,24255517,24255253,24254824,24254288,24249541	Gene ID= ENSG00000092295.11 TPM= 7.01 Transcript Type= NA
chr14	24249114	24263210	24249114	24263210	-	ENST00000206765.10@TGM1	ENST00000206765.10	protein_coding	24263089,24262034,24261695,24260450,24259940,24259704,24259075,24258535,24258285,24255989,24255364,24254972,24254664,24254152,24249114	24263210,24262354,24261883,24260698,24260058,24259811,24259249,24258673,24258388,24256077,24255517,24255253,24254824,24254288,24249541	Gene ID= ENSG00000092295.11 TPM= 19.85 Transcript Type= protein_coding
chr14	24265538	24267182	24265538	24267182	-	transcript818.chr14.nnic@NA	transcript818.chr14.nnic	NA	24265538	24267182	Gene ID= novel_gene_chr14_819 TPM= 2.34 Transcript Type= NA
chr14	24265538	24271739	24265538	24271739	-	ENST00000216840.10@RABGGTA	ENST00000216840.10	protein_coding	24271487,24271113,24270837,24270334,24269953,24269491,24269080,24268911,24268725,24268514,24268369,24268110,24267870,24267660,24266776,24266430,24265538	24271739,24271169,24270947,24270458,24270140,24269694,24269163,24268993,24268826,24268619,24268420,24268198,24267958,24267776,24266889,24266517,24265763	Gene ID= ENSG00000100949.14 TPM= 60.89 Transcript Type= protein_coding
chr14	24265538	24271620	24265538	24271620	-	transcript788.chr14.nic@RABGGTA	transcript788.chr14.nic	protein_coding	24271487,24271113,24270837,24270334,24269953,24269491,24269080,24268911,24268725,24268514,24268369,24268110,24267870,24267660,24266776,24266430,24265538	24271620,24271169,24270998,24270458,24270140,24269694,24269163,24268993,24268826,24268619,24268420,24268198,24267958,24267776,24266889,24266517,24265763	Gene ID= ENSG00000100949.14 TPM= 7.18 Transcript Type= NA
chr14	24265538	24271599	24265538	24271599	-	ENST00000399409.7@RABGGTA	ENST00000399409.7	protein_coding	24271113,24270837,24270334,24269953,24269491,24269080,24268911,24268725,24268514,24268369,24268110,24267870,24267660,24266776,24266430,24265538	24271599,24270947,24270458,24270140,24269694,24269163,24268993,24268826,24268619,24268420,24268198,24267958,24267776,24266889,24266517,24265763	Gene ID= ENSG00000100949.14 TPM= 15.35 Transcript Type= protein_coding
chr14	24265538	24271620	24265538	24271620	-	transcript798.chr14.nic@RABGGTA	transcript798.chr14.nic	protein_coding	24271487,24271113,24270837,24270334,24269953,24269491,24269080,24268911,24268725,24268514,24268369,24268110,24267870,24267660,24266430,24265538	24271620,24271169,24270947,24270458,24270140,24269694,24269163,24268993,24268826,24268619,24268420,24268198,24267958,24267776,24266889,24265763	Gene ID= ENSG00000100949.14 TPM= 3.5 Transcript Type= NA
chr14	24265556	24271549	24265556	24271549	-	ENST00000559974.5@RABGGTA	ENST00000559974.5	protein_coding	24271487,24271113,24270837,24270334,24269953,24269491,24269080,24268911,24268725,24268514,24268369,24268110,24267866,24267660,24266776,24266430,24265556	24271549,24271248,24270947,24270458,24270140,24269694,24269163,24268993,24268826,24268619,24268420,24268198,24267958,24267776,24266889,24266517,24265763	Gene ID= ENSG00000100949.14 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr14	24290598	24299833	24290598	24299833	-	ENST00000288111.11@DHRS1	ENST00000288111.11	protein_coding	24299581,24298957,24296738,24296509,24292652,24292184,24291556,24291139,24290598	24299833,24299130,24296881,24296588,24292784,24292330,24291625,24291219,24290995	Gene ID= ENSG00000157379.13 TPM= 14.01 Transcript Type= protein_coding
chr14	24290598	24299780	24290598	24299780	-	transcript807.chr14.nic@DHRS1	transcript807.chr14.nic	protein_coding	24299581,24298957,24296738,24296509,24292652,24292184,24291139,24290598	24299780,24299130,24296881,24296588,24292784,24292330,24291219,24290995	Gene ID= ENSG00000157379.13 TPM= 4.67 Transcript Type= NA
chr14	24290636	24299761	24290636	24299761	-	ENST00000561273.5@DHRS1	ENST00000561273.5	protein_coding	24299581,24298957,24296738,24296509,24292184,24291139,24290636	24299761,24299130,24296881,24296588,24292784,24291625,24290995	Gene ID= ENSG00000157379.13 TPM= 1.17 Transcript Type= retained_intron
chr14	24299862	24309124	24299862	24309124	+	ENST00000267425.7@NOP9	ENST00000267425.7	protein_coding	24299862,24300408,24301612,24301965,24302232,24303074,24303732,24304041,24304493,24304938	24300201,24300857,24301722,24302106,24302424,24303214,24303857,24304277,24304598,24309124	Gene ID= ENSG00000196943.12 TPM= 4.67 Transcript Type= protein_coding
chr14	24305187	24311436	24305187	24311436	-	transcript827.chr14.nnic@CIDEB	transcript827.chr14.nnic	protein_coding	24310649,24308479,24307818,24307371,24306374,24305947,24305187	24311436,24308830,24307953,24307515,24306523,24306137,24305765	Gene ID= ENSG00000136305.11 TPM= 9.14 Transcript Type= NA
chr14	24305187	24311428	24305187	24311428	-	transcript829.chr14.nic@CIDEB	transcript829.chr14.nic	protein_coding	24310649,24307818,24307371,24306374,24305947,24305187	24311428,24310548,24307515,24306523,24306137,24305765	Gene ID= ENSG00000136305.11 TPM= 4.09 Transcript Type= NA
chr14	24305187	24311422	24305187	24311422	-	ENST00000258807.5@CIDEB	ENST00000258807.5	protein_coding	24310649,24308479,24307818,24307371,24306374,24305947,24305187	24311422,24308830,24307920,24307515,24306523,24306137,24305765	Gene ID= ENSG00000136305.11 TPM= 23.15 Transcript Type= protein_coding
chr14	24305187	24311395	24305187	24311395	-	ENST00000336557.9@CIDEB	ENST00000336557.9	protein_coding	24310649,24310407,24308479,24307818,24307371,24306374,24305947,24305187	24311395,24310548,24308830,24307920,24307515,24306523,24306137,24305765	Gene ID= ENSG00000136305.11 TPM= 10.31 Transcript Type= protein_coding
chr14	24311499	24316946	24311499	24316946	+	ENST00000345363.7@LTB4R	ENST00000345363.7	protein_coding	24311499,24315637	24311804,24316946	Gene ID= ENSG00000213903.8 TPM= 8.17 Transcript Type= protein_coding
chr14	24313923	24316944	24313923	24316944	+	transcript837.chr14.nnic@NA	transcript837.chr14.nnic	NA	24313923	24316944	Gene ID= novel_gene_chr14_838 TPM= 5.84 Transcript Type= NA
chr14	24327939	24335076	24327939	24335076	-	transcript856.chr14.nnic@ADCY4	transcript856.chr14.nnic	protein_coding	24334494,24332791,24332522,24331788,24331208,24331018,24330168,24329860,24329401,24329061,24327939	24335076,24332988,24332683,24331937,24331356,24331129,24330295,24330018,24329533,24329234,24328422	Gene ID= ENSG00000129467.13 TPM= 3.5 Transcript Type= NA
chr14	24318392	24334747	24318392	24334747	-	ENST00000418030.6@ADCY4	ENST00000418030.6	protein_coding	24334494,24332791,24332522,24331788,24331208,24331018,24330168,24329860,24329401,24329061,24326299,24326079,24325818,24325377,24324307,24324062,24323344,24322904,24322624,24322066,24319742,24319329,24319098,24318654,24318392	24334747,24332988,24332683,24331937,24331356,24331129,24330295,24330018,24329533,24329234,24326342,24326165,24325887,24325474,24324391,24324199,24323454,24323088,24322708,24322224,24319888,24319436,24319212,24318778,24318568	Gene ID= ENSG00000129467.13 TPM= 1.17 Transcript Type= protein_coding
chr14	24318364	24335071	24318364	24335071	-	ENST00000554068.6@ADCY4	ENST00000554068.6	protein_coding	24334984,24334494,24332791,24332522,24331788,24331208,24331018,24330168,24329860,24329401,24329061,24326299,24326079,24325818,24325377,24324307,24324062,24323344,24322904,24322624,24322066,24319742,24319329,24319098,24318654,24318364	24335071,24334682,24332988,24332683,24331937,24331356,24331129,24330295,24330018,24329533,24329234,24326342,24326165,24325887,24325474,24324391,24324199,24323454,24323088,24322708,24322224,24319888,24319436,24319212,24318778,24318568	Gene ID= ENSG00000129467.13 TPM= 8.17 Transcript Type= protein_coding
chr14	24332238	24335093	24332238	24335093	-	ENST00000557099.2@ADCY4	ENST00000557099.2	protein_coding	24334494,24332238	24335093,24332988	Gene ID= ENSG00000129467.13 TPM= 9.34 Transcript Type= retained_intron
chr14	24336021	24340045	24336021	24340045	-	ENST00000216274.9@RIPK3	ENST00000216274.9	protein_coding	24339807,24339457,24339015,24338422,24338249,24337873,24337695,24337086,24336885,24336021	24340045,24339597,24339324,24338567,24338295,24338040,24337762,24337460,24336945,24336395	Gene ID= ENSG00000129465.15 TPM= 10.51 Transcript Type= protein_coding
chr14	24336021	24340011	24336021	24340011	-	transcript863.chr14.nic@RIPK3	transcript863.chr14.nic	protein_coding	24339807,24339457,24338422,24338211,24337873,24337695,24337086,24336885,24336021	24340011,24339597,24339324,24338295,24338040,24337762,24337460,24336945,24336395	Gene ID= ENSG00000129465.15 TPM= 4.67 Transcript Type= NA
chr14	24398786	24419288	24398786	24419288	+	ENST00000382554.3@NYNRIN	ENST00000382554.3	protein_coding	24398786,24399230,24407869,24408652,24411076,24411354,24412997,24413316,24414596	24399086,24399444,24408527,24410208,24411206,24411450,24413098,24413417,24419288	Gene ID= ENSG00000205978.5 TPM= 50.21 Transcript Type= protein_coding
chr14	24429953	24438408	24429953	24438408	+	transcript898.chr14.nic@KHNYN	transcript898.chr14.nic	protein_coding	24429953,24431463,24432722,24432936,24436072,24436388,24437036	24430931,24432610,24432852,24433032,24436179,24436489,24438408	Gene ID= ENSG00000100441.9 TPM= 7.01 Transcript Type= NA
chr14	24429938	24438408	24429938	24438408	+	ENST00000553935.5@KHNYN	ENST00000553935.5	protein_coding	24429938,24430714,24431463,24432722,24432936,24436072,24436388,24437036	24430119,24430931,24432610,24432852,24433032,24436179,24436489,24438408	Gene ID= ENSG00000100441.9 TPM= 42.03 Transcript Type= protein_coding
chr14	24439766	24442689	24439766	24442689	-	transcript928.chr14.nnic@NA	transcript928.chr14.nnic	NA	24439766	24442689	Gene ID= novel_gene_chr14_929 TPM= 4.67 Transcript Type= NA
chr14	24439766	24442803	24439766	24442803	-	ENST00000399395.7@SDR39U1	ENST00000399395.7	protein_coding	24442754,24442346,24442178,24441674,24440783,24439766	24442803,24442452,24442260,24441795,24440926,24440492	Gene ID= ENSG00000100445.17 TPM= 19.22 Transcript Type= protein_coding
chr14	24439766	24442776	24439766	24442776	-	ENST00000544691.6@SDR39U1	ENST00000544691.6	protein_coding	24442346,24442178,24441674,24440783,24439766	24442776,24442260,24441795,24440926,24440492	Gene ID= ENSG00000100445.17 TPM= 28.27 Transcript Type= retained_intron
chr14	24439766	24442796	24439766	24442796	-	transcript907.chr14.nic@SDR39U1	transcript907.chr14.nic	protein_coding	24442754,24442178,24441674,24440783,24439766	24442796,24442452,24441795,24440926,24440492	Gene ID= ENSG00000100445.17 TPM= 11.63 Transcript Type= NA
chr14	24439766	24442761	24439766	24442761	-	transcript910.chr14.nic@SDR39U1	transcript910.chr14.nic	protein_coding	24442098,24441674,24440783,24439766	24442761,24441795,24440926,24440492	Gene ID= ENSG00000100445.17 TPM= 7.06 Transcript Type= NA
chr14	24439766	24442303	24439766	24442303	-	transcript919.chr14.nic@SDR39U1	transcript919.chr14.nic	protein_coding	24442178,24440783,24439766	24442303,24440926,24440492	Gene ID= ENSG00000100445.17 TPM= 6.96 Transcript Type= NA
chr14	24439766	24442772	24439766	24442772	-	transcript925.chr14.nic@SDR39U1	transcript925.chr14.nic	protein_coding	24441674,24439766	24442772,24440926	Gene ID= ENSG00000100445.17 TPM= 3.5 Transcript Type= NA
chr14	24439780	24442776	24439780	24442776	-	ENST00000556262.5@SDR39U1	ENST00000556262.5	protein_coding	24441674,24440783,24439780	24442776,24440926,24440492	Gene ID= ENSG00000100445.17 TPM= 21.02 Transcript Type= retained_intron
chr14	24442993	24477355	24442993	24477355	+	transcript931.chr14.nnic@NA	transcript931.chr14.nnic	NA	24442993,24445390,24474187	24443112,24445572,24477355	Gene ID= novel_gene_chr14_932 TPM= 3.5 Transcript Type= NA
chr14	24573556	24576260	24573556	24576260	-	ENST00000216336.2@CTSG	ENST00000216336.2	protein_coding	24576169,24575265,24574675,24574245,24573556	24576260,24575412,24574810,24574499,24573810	Gene ID= ENSG00000100448.3 TPM= 7.01 Transcript Type= protein_coding
chr14	24606480	24609658	24606480	24609658	-	ENST00000216338.8@GZMH	ENST00000216338.8	protein_coding	24609559,24608265,24607612,24607149,24606480	24609658,24608412,24607747,24607406,24606746	Gene ID= ENSG00000100450.12 TPM= 2.34 Transcript Type= protein_coding
chr14	24630954	24634267	24630954	24634267	-	ENST00000216341.8@GZMB	ENST00000216341.8	protein_coding	24634106,24632915,24632324,24631858,24630954	24634267,24633062,24632459,24632118,24631214	Gene ID= ENSG00000100453.12 TPM= 5.84 Transcript Type= protein_coding
chr14	24809662	25050297	24809662	25050297	-	ENST00000323944.9@STXBP6	ENST00000323944.9	protein_coding	25049878,24974665,24857027,24855936,24819037,24809662	25050297,24974850,24857157,24856101,24819194,24812732	Gene ID= ENSG00000168952.15 TPM= 40.87 Transcript Type= protein_coding
chr14	24812492	25050160	24812492	25050160	-	transcript955.chr14.nnic@STXBP6	transcript955.chr14.nnic	protein_coding	25049878,24857027,24855936,24819037,24812492	25050160,24857157,24856101,24819194,24812732	Gene ID= ENSG00000168952.15 TPM= 4.67 Transcript Type= NA
chr14	29576942	29927642	29576942	29927642	-	ENST00000415220.6@PRKD1	ENST00000415220.6	protein_coding	29927249,29725536,29666077,29663699,29656476,29638694,29638489,29636290,29634418,29632869,29630742,29629041,29626484,29624152,29599656,29599027,29597491,29578275,29576942	29927642,29725674,29666208,29663859,29656499,29638904,29638566,29636494,29634541,29632946,29631021,29629093,29626556,29624258,29599817,29599125,29597758,29578360,29577456	Gene ID= ENSG00000184304.14 TPM= 2.34 Transcript Type= protein_coding
chr14	29576479	29927512	29576479	29927512	-	ENST00000616995.4@PRKD1	ENST00000616995.4	protein_coding	29927257,29751166,29725536,29666077,29663699,29638694,29638489,29636290,29634418,29632869,29630742,29629041,29626484,29624152,29599656,29599027,29597491,29578275,29576479	29927512,29751173,29725674,29666208,29663859,29638904,29638566,29636494,29634541,29632946,29631021,29629093,29626556,29624258,29599817,29599125,29597758,29578360,29577456	Gene ID= ENSG00000184304.14 TPM= 19.85 Transcript Type= protein_coding
chr14	30559123	30620063	30559123	30620063	+	ENST00000206595.10@G2E3	ENST00000206595.10	protein_coding	30559123,30581076,30586718,30589383,30592323,30593474,30597420,30598483,30601770,30601999,30605505,30607888,30612207,30615349,30616278	30559272,30581116,30586815,30589484,30592447,30593639,30597526,30598599,30601894,30602131,30605812,30608069,30612379,30615539,30620063	Gene ID= ENSG00000092140.14 TPM= 1.17 Transcript Type= protein_coding
chr14	30622112	30735812	30622112	30735812	+	ENST00000458591.6@SCFD1	ENST00000458591.6	protein_coding	30622112,30628209,30630477,30633947,30638125,30639777,30643316,30649528,30650565,30653489,30670256,30673257,30673924,30674984,30694773,30700188,30702296,30705823,30707990,30715924,30719325,30721884,30722494,30734790,30735586	30622399,30628279,30630565,30634037,30638247,30639864,30643405,30649583,30650650,30653588,30670395,30673347,30673997,30675065,30694869,30700258,30702375,30705885,30708065,30715977,30719377,30721917,30722559,30734858,30735812	Gene ID= ENSG00000092108.20 TPM= 26.85 Transcript Type= protein_coding
chr14	30622319	30735789	30622319	30735789	+	ENST00000544052.6@SCFD1	ENST00000544052.6	protein_coding	30622319,30630477,30633947,30638125,30639777,30643316,30649528,30650565,30653489,30670256,30673257,30673924,30674984,30694773,30700188,30702296,30705823,30707990,30715924,30719325,30721884,30722494,30734790,30735586	30622399,30630565,30634037,30638247,30639864,30643405,30649583,30650650,30653588,30670395,30673347,30673997,30675065,30694869,30700258,30702375,30705885,30708065,30715977,30719377,30721917,30722559,30734858,30735789	Gene ID= ENSG00000092108.20 TPM= 4.67 Transcript Type= protein_coding
chr14	30893799	31026415	30893799	31026415	-	transcript995.chr14.nic@STRN3	transcript995.chr14.nic	protein_coding	31025904,30956139,30955620,30950863,30947090,30936495,30935163,30929201,30913524,30912007,30911777,30911041,30906877,30905418,30902536,30895662,30893799	31026415,30956242,30955693,30950944,30947263,30936624,30935304,30929311,30913657,30912182,30911824,30911162,30907044,30905558,30902643,30895748,30895580	Gene ID= ENSG00000196792.11 TPM= 2.34 Transcript Type= NA
chr14	30894888	31026416	30894888	31026416	-	transcript999.chr14.nic@STRN3	transcript999.chr14.nic	protein_coding	31025904,30956139,30955620,30950863,30947090,30936495,30935163,30918966,30913524,30912007,30911777,30911041,30906877,30905418,30902536,30895662,30894888	31026416,30956242,30955693,30950944,30947263,30936624,30935304,30919106,30913657,30912182,30911824,30911162,30907044,30905558,30902643,30895748,30895580	Gene ID= ENSG00000196792.11 TPM= 3.5 Transcript Type= NA
chr14	30893799	31026401	30893799	31026401	-	ENST00000355683.9@STRN3	ENST00000355683.9	protein_coding	31025904,30956139,30955620,30950863,30947090,30936495,30935163,30913524,30912007,30911777,30911041,30906877,30905418,30902536,30895662,30893799	31026401,30956242,30955693,30950944,30947263,30936624,30935304,30913657,30912182,30911824,30911162,30907044,30905558,30902643,30895748,30895580	Gene ID= ENSG00000196792.11 TPM= 9.34 Transcript Type= protein_coding
chr14	31100118	31208160	31100118	31208160	-	transcript1007.chr14.nic@HECTD1	transcript1007.chr14.nic	protein_coding	31207016,31205797,31178020,31174911,31173525,31173156,31172046,31171861,31169354,31168298,31157165,31156840,31149999,31148897,31148721,31144807,31144111,31141858,31139892,31136531,31135476,31134872,31133509,31133238,31128612,31127785,31122914,31121383,31119710,31116236,31114286,31113877,31113277,31113104,31112416,31109397,31107567,31106646,31105590,31105383,31102916,31101180,31100118	31208160,31205957,31178254,31175138,31173806,31173426,31172122,31171959,31169468,31168472,31157303,31157010,31150221,31149160,31148797,31144941,31144257,31141952,31139997,31136665,31135615,31135195,31133675,31133414,31129307,31128006,31123047,31121505,31119866,31116458,31114340,31114059,31113484,31113189,31112543,31109598,31107704,31107253,31105668,31105476,31103066,31101324,31101067	Gene ID= ENSG00000092148.12 TPM= 10.71 Transcript Type= NA
chr14	31100118	31123670	31100118	31123670	-	ENST00000555843.5@HECTD1	ENST00000555843.5	protein_coding	31122920,31121383,31119710,31116236,31114286,31113877,31113277,31113104,31112416,31109397,31107567,31106646,31105590,31105383,31102916,31101180,31100118	31123670,31121505,31119866,31116458,31114340,31114059,31113484,31113189,31112543,31109598,31107704,31107253,31105668,31105476,31103066,31101324,31101067	Gene ID= ENSG00000092148.12 TPM= 3.12 Transcript Type= retained_intron
chr14	31131576	31134055	31131576	31134055	-	transcript1030.chr14.nic@HECTD1	transcript1030.chr14.nic	protein_coding	31133509,31131576	31134055,31133414	Gene ID= ENSG00000092148.12 TPM= 2.34 Transcript Type= NA
chr14	31178701	31181632	31178701	31181632	+	transcript1031.chr14.nnic@NA	transcript1031.chr14.nnic	NA	31178701	31181632	Gene ID= novel_gene_chr14_1032 TPM= 2.34 Transcript Type= NA
chr14	31204769	31208157	31204769	31208157	-	transcript1033.chr14.nnic@NA	transcript1033.chr14.nnic	NA	31204769	31208157	Gene ID= novel_gene_chr14_1034 TPM= 3.5 Transcript Type= NA
chr14	31291791	31420582	31291791	31420582	-	ENST00000543095.6@HEATR5A	ENST00000543095.6	protein_coding	31420472,31402850,31400301,31398673,31395199,31394052,31388845,31387120,31386420,31383521,31380467,31374816,31371810,31364189,31358894,31358637,31350612,31349789,31347748,31345087,31343896,31337476,31326163,31323565,31321499,31318224,31315770,31312968,31308934,31307893,31306732,31304905,31302295,31295909,31293891,31291791	31420582,31403049,31400512,31398781,31395348,31394226,31389005,31387375,31386575,31383771,31380578,31374968,31371909,31364298,31359057,31358812,31350717,31349979,31347907,31345276,31344065,31337614,31326342,31323804,31321680,31318292,31315949,31313190,31309182,31308020,31306879,31305177,31302519,31296063,31294104,31293612	Gene ID= ENSG00000129493.14 TPM= 19.85 Transcript Type= protein_coding
chr14	31400266	31420531	31400266	31420531	-	ENST00000382464.6@HEATR5A	ENST00000382464.6	protein_coding	31420472,31402850,31400266	31420531,31403049,31400512	Gene ID= ENSG00000129493.14 TPM= 2.34 Transcript Type= protein_coding
chr14	31422849	31427180	31422849	31427180	-	transcript1044.chr14.nnic@NA	transcript1044.chr14.nnic	NA	31422849	31427180	Gene ID= novel_gene_chr14_1045 TPM= 2.34 Transcript Type= NA
chr14	31446036	31457464	31446036	31457464	-	transcript1046.chr14.nnic@DTD2	transcript1046.chr14.nnic	protein_coding	31457029,31453275,31447645,31446036	31457464,31453344,31448454,31447226	Gene ID= ENSG00000129480.12 TPM= 3.5 Transcript Type= NA
chr14	31446040	31457464	31446040	31457464	-	transcript1047.chr14.nnic@DTD2	transcript1047.chr14.nnic	protein_coding	31457029,31453275,31447586,31446040	31457464,31453344,31448454,31447263	Gene ID= ENSG00000129480.12 TPM= 3.5 Transcript Type= NA
chr14	31561395	31861224	31561395	31861224	+	ENST00000281081.11@NUBPL	ENST00000281081.11	protein_coding	31561395,31562068,31565014,31599289,31673355,31673484,31787780,31826629,31846471,31850119,31859118	31561547,31562215,31565048,31599379,31673394,31673574,31787873,31826714,31846591,31850201,31861224	Gene ID= ENSG00000151413.16 TPM= 4.67 Transcript Type= protein_coding
chr14	32077289	32159728	32077289	32159728	+	ENST00000345122.7@ARHGAP5	ENST00000345122.7	protein_coding	32077289,32090502,32117140,32146263,32149902,32152423,32154621	32077435,32094386,32117287,32146340,32150033,32152528,32159728	Gene ID= ENSG00000100852.12 TPM= 7.01 Transcript Type= protein_coding
chr14	32077309	32157079	32077309	32157079	+	ENST00000433497.5@ARHGAP5	ENST00000433497.5	protein_coding	32077309,32117143,32146263,32149902,32152423,32154621	32077435,32117287,32146340,32150033,32152528,32157079	Gene ID= ENSG00000100852.12 TPM= 1.17 Transcript Type= protein_coding
chr14	32077074	32159728	32077074	32159728	+	ENST00000396582.6@ARHGAP5	ENST00000396582.6	protein_coding	32077074,32146263,32149902,32152423,32154621	32077435,32146340,32150033,32152528,32159728	Gene ID= ENSG00000100852.12 TPM= 1.17 Transcript Type= protein_coding
chr14	32329273	32837681	32329273	32837681	+	ENST00000280979.8@AKAP6	ENST00000280979.8	protein_coding	32329273,32433460,32535554,32545230,32577120,32599410,32600629,32678311,32695990,32732454,32735658,32773678,32821402,32829848	32329408,32433817,32535805,32546999,32577242,32599506,32600792,32678459,32696110,32732600,32735882,32773893,32824815,32837681	Gene ID= ENSG00000151320.10 TPM= 1.17 Transcript Type= protein_coding
chr14	33924231	33951081	33924231	33951081	-	ENST00000250457.7@EGLN3	ENST00000250457.7	protein_coding	33950396,33931096,33929076,33926960,33924231	33951081,33931215,33929212,33927033,33925922	Gene ID= ENSG00000129521.13 TPM= 4.67 Transcript Type= protein_coding
chr14	34432789	34462356	34432789	34462356	-	ENST00000298130.4@SPTSSA	ENST00000298130.4	protein_coding	34462096,34432789	34462356,34435304	Gene ID= ENSG00000165389.6 TPM= 16.35 Transcript Type= protein_coding
chr14	34452605	34455940	34452605	34455940	+	transcript1087.chr14.nnic@NA	transcript1087.chr14.nnic	NA	34452605	34455940	Gene ID= novel_gene_chr14_1088 TPM= 2.34 Transcript Type= NA
chr14	34516010	34539740	34516010	34539740	-	transcript1094.chr14.nnic@EAPP	transcript1094.chr14.nnic	protein_coding	34539555,34536094,34533444,34524697,34516010	34539740,34536275,34533539,34524807,34516586	Gene ID= ENSG00000129518.8 TPM= 5.84 Transcript Type= NA
chr14	34515929	34539710	34515929	34539710	-	ENST00000250454.7@EAPP	ENST00000250454.7	protein_coding	34539555,34536094,34533444,34529358,34524697,34515929	34539710,34536275,34533539,34529475,34524807,34516586	Gene ID= ENSG00000129518.8 TPM= 8.17 Transcript Type= protein_coding
chr14	34561409	34630192	34561409	34630192	-	transcript1108.chr14.nic@SNX6	transcript1108.chr14.nic	protein_coding	34630111,34629907,34609638,34605596,34603348,34597550,34593045,34586230,34581561,34575756,34567854,34567686,34561409	34630192,34629954,34609742,34605717,34603471,34597645,34593150,34586305,34581600,34575842,34568013,34567771,34563175	Gene ID= ENSG00000129515.18 TPM= 4.67 Transcript Type= NA
chr14	34562409	34630183	34562409	34630183	-	ENST00000362031.8@SNX6	ENST00000362031.8	protein_coding	34630111,34629907,34609638,34608030,34605596,34603348,34597550,34593045,34586230,34581561,34575756,34567854,34567686,34562409	34630183,34629954,34609742,34608140,34605717,34603471,34597645,34593150,34586305,34581600,34575842,34568013,34567771,34563175	Gene ID= ENSG00000129515.18 TPM= 49.04 Transcript Type= protein_coding
chr14	34800260	34875360	34800260	34875360	-	transcript1133.chr14.nic@BAZ1A	transcript1133.chr14.nic	protein_coding	34875138,34874492,34862044,34826013,34810935,34807451,34802854,34801094,34800260	34875360,34874662,34862322,34826156,34811036,34807538,34802988,34801193,34800390	Gene ID= ENSG00000198604.10 TPM= 5.06 Transcript Type= NA
chr14	34800326	34875034	34800326	34875034	-	transcript1134.chr14.nnic@BAZ1A	transcript1134.chr14.nnic	protein_coding	34874869,34874492,34862044,34826013,34810935,34807451,34802854,34801094,34800326	34875034,34874662,34862322,34826156,34811036,34807538,34802988,34801193,34800390	Gene ID= ENSG00000198604.10 TPM= 2.72 Transcript Type= NA
chr14	34873801	34876459	34873801	34876459	+	transcript1137.chr14.nnic@NA	transcript1137.chr14.nnic	NA	34873801	34876459	Gene ID= novel_gene_chr14_1138 TPM= 12.84 Transcript Type= NA
chr14	35046421	35081725	35046421	35081725	+	transcript1167.chr14.nic@FAM177A1	transcript1167.chr14.nic	protein_coding	35046421,35053278,35077150,35078927,35081022	35047084,35053451,35077216,35079024,35081725	Gene ID= ENSG00000151327.12 TPM= 3.5 Transcript Type= NA
chr14	35046247	35050396	35046247	35050396	+	transcript1172.chr14.nic@FAM177A1	transcript1172.chr14.nic	protein_coding	35046247,35046505,35050033	35046406,35046628,35050396	Gene ID= ENSG00000151327.12 TPM= 8.17 Transcript Type= NA
chr14	35046378	35081387	35046378	35081387	+	ENST00000382406.7@FAM177A1	ENST00000382406.7	protein_coding	35046378,35046505,35053278,35077150,35078927,35081022	35046406,35046628,35053451,35077216,35079024,35081387	Gene ID= ENSG00000151327.12 TPM= 5.84 Transcript Type= protein_coding
chr14	35046403	35083383	35046403	35083383	+	ENST00000280987.8@FAM177A1	ENST00000280987.8	protein_coding	35046403,35053278,35077150,35078927,35081022	35046628,35053451,35077216,35079024,35083383	Gene ID= ENSG00000151327.12 TPM= 44.95 Transcript Type= protein_coding
chr14	35046453	35050396	35046453	35050396	+	ENST00000554052.2@FAM177A1	ENST00000554052.2	protein_coding	35046453,35050033	35046628,35050396	Gene ID= ENSG00000151327.12 TPM= 11.68 Transcript Type= protein_coding
chr14	35085476	35122658	35085476	35122658	-	transcript1143.chr14.nic@PPP2R3C	transcript1143.chr14.nic	protein_coding	35122222,35121902,35116610,35110525,35109819,35108139,35107304,35099252,35096709,35096558,35095048,35091070,35087951,35085476	35122658,35122101,35116737,35110629,35109931,35108236,35107374,35099384,35096764,35096633,35095184,35091207,35088010,35085778	Gene ID= ENSG00000092020.10 TPM= 22.18 Transcript Type= NA
chr14	35122545	35274065	35122545	35274065	+	transcript1148.chr14.nic@KIAA0391	transcript1148.chr14.nic	protein_coding	35122545,35122952,35126735,35127479,35180670,35266727,35270401,35273435	35122767,35124231,35126782,35127611,35180777,35266875,35270596,35274065	Gene ID= ENSG00000100890.15 TPM= 2.34 Transcript Type= NA
chr14	35122570	35274065	35122570	35274065	+	ENST00000534898.8@KIAA0391	ENST00000534898.8	protein_coding	35122570,35122952,35126735,35127479,35180670,35266727,35270401,35273435	35122635,35124231,35126782,35127611,35180777,35266875,35270596,35274065	Gene ID= ENSG00000100890.15 TPM= 7.01 Transcript Type= protein_coding
chr14	35122549	35317474	35122549	35317474	+	ENST00000557565.1@AL121594.3	ENST00000557565.1	protein_coding	35122549,35122952,35126735,35127479,35180670,35266727,35270401,35273435,35278553,35307994,35308914,35310740,35312881,35314361,35317249	35122635,35124231,35126782,35127611,35180777,35266875,35270596,35274291,35278718,35308088,35308995,35310895,35313059,35314455,35317474	Gene ID= ENSG00000258790.1 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr14	35292357	35317474	35292357	35317474	+	ENST00000261479.8@PSMA6	ENST00000261479.8	protein_coding	35292357,35307994,35308914,35310740,35312881,35314361,35317249	35292552,35308088,35308995,35310895,35313059,35314455,35317474	Gene ID= ENSG00000100902.10 TPM= 163.08 Transcript Type= protein_coding
chr14	35292393	35317474	35292393	35317474	+	ENST00000554961.5@PSMA6	ENST00000554961.5	protein_coding	35292393,35307994,35308914,35310740,35314361,35317249	35292552,35308088,35308995,35310895,35314455,35317474	Gene ID= ENSG00000100902.10 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr14	35401511	35404749	35401511	35404749	-	transcript1193.chr14.nic@NFKBIA	transcript1193.chr14.nic	protein_coding	35404418,35403690,35403150,35402394,35401511	35404749,35403798,35403360,35402859,35402060	Gene ID= ENSG00000100906.10 TPM= 5.84 Transcript Type= NA
chr14	35401511	35404746	35401511	35404746	-	ENST00000216797.9@NFKBIA	ENST00000216797.9	protein_coding	35404418,35403690,35403150,35402771,35402394,35401511	35404746,35403798,35403360,35402859,35402663,35402060	Gene ID= ENSG00000100906.10 TPM= 165.8 Transcript Type= protein_coding
chr14	35401540	35404746	35401540	35404746	-	ENST00000557140.5@NFKBIA	ENST00000557140.5	protein_coding	35404418,35403690,35403150,35402771,35402394,35401540	35404746,35403798,35403360,35402859,35402534,35402060	Gene ID= ENSG00000100906.10 TPM= 3.5 Transcript Type= protein_coding
chr14	35401937	35404748	35401937	35404748	-	transcript1203.chr14.nnic@NA	transcript1203.chr14.nnic	NA	35401937	35404748	Gene ID= novel_gene_chr14_1204 TPM= 4.67 Transcript Type= NA
chr14	35538352	35809304	35538352	35809304	-	ENST00000307138.10@RALGAPA1	ENST00000307138.10	protein_coding	35808730,35775635,35775006,35770942,35762710,35760829,35756793,35752024,35750482,35748585,35742368,35738513,35728362,35725024,35723027,35721688,35689836,35686542,35684929,35683809,35677950,35674516,35674180,35672867,35671389,35664642,35659138,35655807,35654367,35651805,35635464,35634574,35627090,35625361,35605586,35595634,35572560,35570617,35549110,35538352	35809304,35775745,35775055,35770999,35762753,35761006,35756908,35752162,35750690,35748824,35742565,35738650,35728510,35725153,35723264,35721849,35690003,35686666,35685145,35683985,35678102,35674709,35674278,35673022,35671517,35664767,35659196,35655915,35654477,35651873,35635598,35634757,35627951,35625432,35605709,35595789,35572718,35570744,35549234,35539690	Gene ID= ENSG00000174373.16 TPM= 5.84 Transcript Type= protein_coding
chr14	35826318	35871963	35826318	35871963	+	ENST00000216807.11@BRMS1L	ENST00000216807.11	protein_coding	35826318,35831410,35832978,35834844,35862590,35863870,35864935,35865722,35867906,35870360	35826658,35831500,35833105,35834923,35862686,35863953,35864999,35865761,35868032,35871963	Gene ID= ENSG00000100916.13 TPM= 14.01 Transcript Type= protein_coding
chr14	36214607	36235608	36214607	36235608	+	ENST00000556542.1@AL162511.1	ENST00000556542.1	lincRNA	36214607,36215374,36235324	36215058,36215515,36235608	Gene ID= ENSG00000258844.1 TPM= 4.67 Transcript Type= lincRNA
chr14	36298558	36320676	36298558	36320676	-	ENST00000416007.8@MBIP	ENST00000416007.8	protein_coding	36320460,36316693,36314691,36314512,36311959,36311573,36308092,36300785,36298558	36320676,36316812,36314915,36314608,36312024,36311725,36308189,36300823,36299190	Gene ID= ENSG00000151332.18 TPM= 83.48 Transcript Type= protein_coding
chr14	36298565	36320602	36298565	36320602	-	transcript1222.chr14.nic@MBIP	transcript1222.chr14.nic	protein_coding	36320460,36316693,36314691,36311959,36311573,36308092,36300785,36298565	36320602,36316812,36314915,36314608,36311725,36308189,36300823,36299190	Gene ID= ENSG00000151332.18 TPM= 2.92 Transcript Type= NA
chr14	36298565	36320624	36298565	36320624	-	ENST00000621657.4@MBIP	ENST00000621657.4	protein_coding	36320460,36316693,36314691,36314512,36311959,36311573,36308092,36305089,36300785,36298565	36320624,36316812,36314915,36314608,36312024,36311725,36308189,36305305,36300826,36299190	Gene ID= ENSG00000151332.18 TPM= 1.17 Transcript Type= protein_coding
chr14	36298568	36320627	36298568	36320627	-	ENST00000318473.11@MBIP	ENST00000318473.11	protein_coding	36320460,36316693,36314691,36314512,36311959,36311573,36308092,36300785,36298568	36320627,36316812,36314915,36314608,36312024,36311725,36308189,36300823,36299187	Gene ID= ENSG00000151332.18 TPM= 10.51 Transcript Type= protein_coding
chr14	36298590	36320607	36298590	36320607	-	ENST00000359527.11@MBIP	ENST00000359527.11	protein_coding	36320460,36316693,36314691,36314512,36311959,36311573,36300785,36298590	36320607,36316812,36314915,36314608,36312024,36311725,36300823,36299190	Gene ID= ENSG00000151332.18 TPM= 1.17 Transcript Type= protein_coding
chr14	36303374	36306320	36303374	36306320	+	transcript1224.chr14.nnic@NA	transcript1224.chr14.nnic	NA	36303374	36306320	Gene ID= novel_gene_chr14_1225 TPM= 2.34 Transcript Type= NA
chr14	36473288	36513814	36473288	36513814	-	transcript1231.chr14.nnic@SFTA3	transcript1231.chr14.nnic	protein_coding	36513677,36513112,36491201,36477301,36476971,36474670,36473288	36513814,36513172,36491291,36477878,36477103,36474873,36473881	Gene ID= ENSG00000229415.9 TPM= 4.67 Transcript Type= NA
chr14	36473288	36513932	36473288	36513932	-	transcript1232.chr14.nic@SFTA3	transcript1232.chr14.nic	protein_coding	36513112,36491201,36477716,36476971,36474670,36473288	36513932,36491291,36477878,36477098,36474873,36473881	Gene ID= ENSG00000229415.9 TPM= 8.17 Transcript Type= NA
chr14	36473288	36514802	36473288	36514802	-	transcript1247.chr14.nic@SFTA3	transcript1247.chr14.nic	protein_coding	36513112,36491201,36476971,36474670,36473288	36514802,36491291,36477103,36474873,36473881	Gene ID= ENSG00000229415.9 TPM= 31.53 Transcript Type= NA
chr14	36473288	36513940	36473288	36513940	-	transcript1259.chr14.nic@SFTA3	transcript1259.chr14.nic	protein_coding	36513112,36491201,36474670,36473288	36513940,36491291,36474873,36473881	Gene ID= ENSG00000229415.9 TPM= 17.51 Transcript Type= NA
chr14	36473288	36513846	36473288	36513846	-	transcript1262.chr14.nic@SFTA3	transcript1262.chr14.nic	protein_coding	36513112,36491201,36476971,36473288	36513846,36491291,36477103,36473881	Gene ID= ENSG00000229415.9 TPM= 7.01 Transcript Type= NA
chr14	36473288	36513931	36473288	36513931	-	transcript1264.chr14.nnic@SFTA3	transcript1264.chr14.nnic	protein_coding	36513677,36513112,36491201,36473288	36513931,36513291,36491291,36473881	Gene ID= ENSG00000229415.9 TPM= 6.22 Transcript Type= NA
chr14	36473288	36513896	36473288	36513896	-	transcript1276.chr14.nnic@SFTA3	transcript1276.chr14.nnic	protein_coding	36513112,36491201,36473288	36513896,36491291,36473881	Gene ID= ENSG00000229415.9 TPM= 32.69 Transcript Type= NA
chr14	36473288	36513829	36473288	36513829	-	ENST00000518529.6@SFTA3	ENST00000518529.6	protein_coding	36513112,36491201,36476971,36473288	36513829,36491291,36477098,36473881	Gene ID= ENSG00000229415.9 TPM= 12.06 Transcript Type= protein_coding
chr14	36488090	36490764	36488090	36490764	+	transcript1295.chr14.nnic@NA	transcript1295.chr14.nnic	NA	36488090	36490764	Gene ID= novel_gene_chr14_1296 TPM= 4.67 Transcript Type= NA
chr14	36503489	36505842	36503489	36505842	-	transcript1301.chr14.nnic@NA	transcript1301.chr14.nnic	NA	36503489	36505842	Gene ID= novel_gene_chr14_1302 TPM= 2.34 Transcript Type= NA
chr14	36512138	36516830	36512138	36516830	+	transcript1291.chr14.nnic@NA	transcript1291.chr14.nnic	NA	36512138	36516830	Gene ID= novel_gene_chr14_1292 TPM= 7.01 Transcript Type= NA
chr14	36516392	36520921	36516392	36520921	-	transcript1258.chr14.nic@NKX2-1	transcript1258.chr14.nic	protein_coding	36520557,36520053,36519468,36518985,36516392	36520921,36520286,36519612,36519370,36518020	Gene ID= ENSG00000136352.17 TPM= 68.71 Transcript Type= NA
chr14	36516392	36521028	36516392	36521028	-	transcript1280.chr14.nic@NKX2-1	transcript1280.chr14.nic	protein_coding	36519468,36518985,36516392	36521028,36519370,36518020	Gene ID= ENSG00000136352.17 TPM= 22.77 Transcript Type= NA
chr14	36516417	36520231	36516417	36520231	-	transcript1290.chr14.nnic@NKX2-1	transcript1290.chr14.nnic	protein_coding	36518985,36516417	36520231,36517883	Gene ID= ENSG00000136352.17 TPM= 12.38 Transcript Type= NA
chr14	36516392	36519693	36516392	36519693	-	ENST00000498187.6@NKX2-1	ENST00000498187.6	protein_coding	36518985,36516392	36519693,36518020	Gene ID= ENSG00000136352.17 TPM= 215.25 Transcript Type= protein_coding
chr14	36516392	36520228	36516392	36520228	-	ENST00000354822.6@NKX2-1	ENST00000354822.6	protein_coding	36520053,36518985,36516392	36520228,36519370,36518020	Gene ID= ENSG00000136352.17 TPM= 54.12 Transcript Type= protein_coding
chr14	36516398	36519815	36516398	36519815	-	transcript1297.chr14.nnic@NA	transcript1297.chr14.nnic	NA	36516398	36519815	Gene ID= novel_gene_chr14_1298 TPM= 52.54 Transcript Type= NA
chr14	36519278	36523016	36519278	36523016	+	ENST00000521292.2@NKX2-1-AS1	ENST00000521292.2	antisense_RNA	36519278,36521644	36519679,36523016	Gene ID= ENSG00000253563.2 TPM= 1.17 Transcript Type= antisense_RNA
chr14	36679289	37172866	36679289	37172866	-	ENST00000331299.5@SLC25A21	ENST00000331299.5	protein_coding	37172281,36874956,36813918,36734507,36729507,36725570,36711318,36684744,36683828,36679289	37172866,36875004,36814001,36734573,36729566,36725677,36711482,36684925,36683880,36680719	Gene ID= ENSG00000183032.11 TPM= 1.17 Transcript Type= protein_coding
chr14	37171888	37173811	37171888	37173811	+	ENST00000556667.1@SLC25A21-AS1	ENST00000556667.1	antisense_RNA	37171888	37173811	Gene ID= ENSG00000258708.1 TPM= 5.84 Transcript Type= antisense_RNA
chr14	37270643	37282288	37270643	37282288	-	transcript1310.chr14.nnic@NA	transcript1310.chr14.nnic	NA	37270643	37282288	Gene ID= novel_gene_chr14_1311 TPM= 3.5 Transcript Type= NA
chr14	37589984	37595034	37589984	37595034	-	ENST00000250448.2@FOXA1	ENST00000250448.2	protein_coding	37594901,37589984	37595034,37592711	Gene ID= ENSG00000129514.5 TPM= 11.68 Transcript Type= protein_coding
chr14	37595180	37596758	37595180	37596758	+	transcript1317.chr14.nnic@NA	transcript1317.chr14.nnic	NA	37595180	37596758	Gene ID= novel_gene_chr14_1318 TPM= 2.34 Transcript Type= NA
chr14	38244787	38250217	38244787	38250217	+	transcript1323.chr14.nnic@NA	transcript1323.chr14.nnic	NA	38244787	38250217	Gene ID= novel_gene_chr14_1324 TPM= 2.34 Transcript Type= NA
chr14	38251423	38256098	38251423	38256098	-	transcript1333.chr14.nnic@NA	transcript1333.chr14.nnic	NA	38251423	38256098	Gene ID= novel_gene_chr14_1334 TPM= 7.01 Transcript Type= NA
chr14	38254103	38256369	38254103	38256369	-	ENST00000342213.2@CLEC14A	ENST00000342213.2	protein_coding	38254103	38256369	Gene ID= ENSG00000176435.6 TPM= 198.49 Transcript Type= protein_coding
chr14	38254913	38257999	38254913	38257999	+	transcript1325.chr14.nnic@NA	transcript1325.chr14.nnic	NA	38254913	38257999	Gene ID= novel_gene_chr14_1326 TPM= 2.34 Transcript Type= NA
chr14	39031919	39103223	39031919	39103223	-	transcript1340.chr14.nnic@SEC23A	transcript1340.chr14.nnic	protein_coding	39103032,39095898,39093187,39092541,39091477,39086929,39085762,39075935,39074415,39067173,39064913,39063324,39061765,39055143,39048652,39045163,39042786,39040732,39039031,39031919	39103223,39096139,39093244,39092627,39091713,39087008,39085906,39076093,39074530,39067296,39064993,39063413,39061871,39055244,39048729,39045324,39042872,39040887,39039096,39033328	Gene ID= ENSG00000100934.14 TPM= 6.42 Transcript Type= NA
chr14	39031920	39103528	39031920	39103528	-	ENST00000307712.10@SEC23A	ENST00000307712.10	protein_coding	39103032,39095898,39093187,39092541,39091477,39086929,39085762,39075935,39074415,39067173,39064913,39063324,39061765,39055143,39048652,39045163,39042786,39040732,39039031,39031920	39103528,39096139,39093244,39092627,39091713,39087008,39085906,39076093,39074530,39067296,39064993,39063413,39061871,39055296,39048729,39045324,39042872,39040887,39039096,39033328	Gene ID= ENSG00000100934.14 TPM= 94.58 Transcript Type= protein_coding
chr14	39114223	39136973	39114223	39136973	+	ENST00000308317.10@GEMIN2	ENST00000308317.10	protein_coding	39114223,39114829,39117999,39118540,39122430,39124992,39128280,39131958,39133661,39136440	39114475,39114913,39118088,39118599,39122543,39125036,39128348,39132068,39133719,39136973	Gene ID= ENSG00000092208.16 TPM= 8.17 Transcript Type= protein_coding
chr14	39114304	39136839	39114304	39136839	+	transcript1350.chr14.nic@GEMIN2	transcript1350.chr14.nic	protein_coding	39114304,39114829,39117999,39118540,39122430,39124992,39131958,39133661,39136440	39114475,39114913,39118088,39118599,39122543,39125036,39132068,39133719,39136839	Gene ID= ENSG00000092208.16 TPM= 2.34 Transcript Type= NA
chr14	39147812	39170393	39147812	39170393	-	ENST00000347691.9@TRAPPC6B	ENST00000347691.9	protein_coding	39170015,39159483,39158285,39151746,39147812	39170393,39159550,39158402,39151839,39150381	Gene ID= ENSG00000182400.14 TPM= 3.5 Transcript Type= protein_coding
chr14	39147811	39170532	39147811	39170532	-	ENST00000469361.5@TRAPPC6B	ENST00000469361.5	protein_coding	39170015,39158285,39154211,39151746,39147811	39170532,39159550,39154294,39151839,39150381	Gene ID= ENSG00000182400.14 TPM= 1.17 Transcript Type= retained_intron
chr14	39147812	39170322	39147812	39170322	-	ENST00000330149.9@TRAPPC6B	ENST00000330149.9	protein_coding	39170015,39159483,39158285,39154211,39151746,39147812	39170322,39159550,39158402,39154294,39151839,39150381	Gene ID= ENSG00000182400.14 TPM= 2.34 Transcript Type= protein_coding
chr14	39267084	39350645	39267084	39350645	+	transcript1367.chr14.nic@CTAGE5	transcript1367.chr14.nic	protein_coding	39267084,39276934,39279337,39279449,39291019,39292680,39293271,39294000,39294925,39299864,39302129,39303478,39304291,39308449,39313340,39314739,39315683,39317944,39319209,39320928,39326864,39345904,39347713,39348743,39350098	39267522,39277065,39279358,39279537,39291096,39292706,39293381,39294071,39295029,39299986,39302249,39303524,39304381,39308587,39313441,39314799,39315718,39318011,39319291,39321056,39327022,39346026,39347771,39348977,39350645	Gene ID= ENSG00000150527.17 TPM= 2.34 Transcript Type= NA
chr14	39265250	39350645	39265250	39350645	+	transcript1370.chr14.nic@CTAGE5	transcript1370.chr14.nic	protein_coding	39265250,39276934,39279337,39279449,39291019,39293271,39294000,39294925,39299864,39302129,39303478,39304291,39308449,39313340,39314739,39315683,39317944,39319209,39320928,39326864,39345904,39347713,39348743,39350098	39265421,39276955,39279358,39279537,39291096,39293381,39294071,39295029,39299986,39302249,39303524,39304381,39308587,39313441,39314799,39315718,39318011,39319291,39321056,39327022,39346026,39347771,39348977,39350645	Gene ID= ENSG00000150527.17 TPM= 2.34 Transcript Type= NA
chr14	39265250	39350421	39265250	39350421	+	transcript1380.chr14.nic@CTAGE5	transcript1380.chr14.nic	protein_coding	39265250,39276934,39279337,39279449,39291019,39293271,39294000,39294925,39299864,39302129,39303478,39304291,39308449,39313340,39314739,39315683,39317944,39319209,39326864,39345904,39347713,39348743,39350098	39265421,39277065,39279358,39279537,39291096,39293381,39294071,39295029,39299986,39302249,39303524,39304381,39308587,39313441,39314799,39315718,39318011,39319291,39327022,39346026,39347771,39348977,39350421	Gene ID= ENSG00000150527.17 TPM= 2.34 Transcript Type= NA
chr14	39265292	39350694	39265292	39350694	+	ENST00000341749.7@CTAGE5	ENST00000341749.7	protein_coding	39265292,39276934,39279337,39279449,39291019,39293271,39294000,39294925,39299864,39302129,39303478,39304291,39308449,39313340,39314739,39315683,39317944,39319209,39320928,39326864,39345904,39347713,39348743,39350098	39265421,39277065,39279358,39279537,39291096,39293381,39294071,39295029,39299986,39302249,39303524,39304381,39308587,39313441,39314799,39315718,39318011,39319291,39321056,39327022,39346026,39347771,39348977,39350694	Gene ID= ENSG00000150527.17 TPM= 12.84 Transcript Type= protein_coding
chr14	39267411	39350421	39267411	39350421	+	ENST00000556148.5@CTAGE5	ENST00000556148.5	protein_coding	39267411,39276934,39279337,39279449,39291019,39293271,39294000,39294925,39299864,39302129,39303478,39304291,39308449,39313340,39314739,39315683,39317944,39319209,39320928,39326864,39345904,39347713,39348743,39350098	39267522,39276955,39279358,39279537,39291111,39293381,39294071,39295029,39299986,39302249,39303524,39304381,39308587,39313441,39314799,39315718,39318011,39319291,39321056,39327022,39346026,39347771,39348977,39350421	Gene ID= ENSG00000150527.17 TPM= 1.17 Transcript Type= protein_coding
chr14	39267414	39350694	39267414	39350694	+	ENST00000348007.7@CTAGE5	ENST00000348007.7	protein_coding	39267414,39276934,39279337,39279449,39291019,39293271,39294000,39294925,39299864,39302129,39303478,39304291,39308449,39313340,39314739,39315683,39317944,39319209,39326864,39345904,39347713,39348743,39350098	39267522,39277065,39279358,39279537,39291096,39293381,39294071,39295029,39299986,39302249,39303524,39304381,39308587,39313441,39314799,39315718,39318011,39319291,39327022,39346026,39347771,39348977,39350694	Gene ID= ENSG00000150527.17 TPM= 1.17 Transcript Type= protein_coding
chr14	39397669	39432500	39397669	39432500	-	ENST00000298097.7@FBXO33	ENST00000298097.7	protein_coding	39431564,39402401,39401176,39397669	39432500,39402511,39401861,39399787	Gene ID= ENSG00000165355.7 TPM= 1.17 Transcript Type= protein_coding
chr14	44897295	44907257	44897295	44907257	+	ENST00000325192.7@C14orf28	ENST00000325192.7	protein_coding	44897295,44900435,44903207,44904395,44905367	44897568,44900959,44903296,44904529,44907257	Gene ID= ENSG00000179476.7 TPM= 7.01 Transcript Type= protein_coding
chr14	44924319	44961965	44924319	44961965	-	ENST00000396128.8@KLHL28	ENST00000396128.8	protein_coding	44961846,44945030,44934115,44931333,44924319	44961965,44945928,44934558,44931541,44929191	Gene ID= ENSG00000179454.13 TPM= 5.84 Transcript Type= protein_coding
chr14	44962214	45008147	44962214	45008147	+	ENST00000555607.1@TOGARAM1	ENST00000555607.1	protein_coding	44962214,44995746,44999363,45004061,45006008	44964467,44995902,44999497,45004366,45008147	Gene ID= ENSG00000198718.12 TPM= 1.17 Transcript Type= retained_intron
chr14	44962239	45074431	44962239	45074431	+	ENST00000361462.6@TOGARAM1	ENST00000361462.6	protein_coding	44962239,44995746,44999363,45004061,45006008,45008913,45011975,45025783,45027299,45028176,45032223,45043686,45044635,45046545,45052436,45054431,45066578,45068424,45071712,45073296	44964467,44995902,44999497,45004366,45006267,45009145,45012075,45025872,45027474,45028329,45032376,45043791,45044870,45046703,45052562,45054549,45066767,45068643,45071798,45074431	Gene ID= ENSG00000198718.12 TPM= 4.67 Transcript Type= protein_coding
chr14	45084103	45115601	45084103	45115601	+	transcript1417.chr14.nnic@PRPF39	transcript1417.chr14.nnic	protein_coding	45084103,45095221,45095406,45096103,45096596,45096887,45102529,45107451,45108415,45109616,45110094,45110549,45112318,45114183,45114494,45114857	45084249,45095305,45095563,45096228,45096758,45097005,45102696,45107616,45108522,45109780,45110220,45110817,45112502,45114257,45114614,45115601	Gene ID= ENSG00000185246.17 TPM= 2.34 Transcript Type= NA
chr14	45084099	45115601	45084099	45115601	+	ENST00000355765.10@PRPF39	ENST00000355765.10	protein_coding	45084099,45095221,45096103,45096887,45102529,45107451,45108415,45109616,45110094,45110549,45112318,45114183,45114494,45114857	45084249,45095563,45096228,45097005,45102696,45107616,45108522,45109780,45110220,45110817,45112502,45114257,45114614,45115601	Gene ID= ENSG00000185246.17 TPM= 10.51 Transcript Type= protein_coding
chr14	45084103	45115601	45084103	45115601	+	transcript1424.chr14.nic@PRPF39	transcript1424.chr14.nic	protein_coding	45084103,45095221,45096103,45102529,45107451,45108415,45109616,45109894,45110094,45110549,45112318,45114183,45114494,45114857	45084249,45095563,45097005,45102696,45107616,45108522,45109780,45109993,45110220,45110817,45112502,45114257,45114614,45115601	Gene ID= ENSG00000185246.17 TPM= 7.01 Transcript Type= NA
chr14	45084118	45115601	45084118	45115601	+	ENST00000477626.5@PRPF39	ENST00000477626.5	protein_coding	45084118,45095221,45096103,45102529,45107451,45108415,45109616,45110094,45110549,45112318,45114183,45114494,45114857	45084249,45095563,45097005,45102696,45107616,45108522,45109780,45110220,45110817,45112502,45114257,45114614,45115601	Gene ID= ENSG00000185246.17 TPM= 8.17 Transcript Type= retained_intron
chr14	45203837	45253180	45203837	45253180	-	transcript1436.chr14.nnic@MIS18BP1	transcript1436.chr14.nnic	protein_coding	45253035,45246743,45242761,45242034,45237648,45235814,45232733,45231141,45227663,45226743,45223918,45218282,45217019,45210380,45207433,45206083,45204399,45203837	45253180,45247377,45242874,45242518,45237721,45235944,45232820,45231298,45227814,45226836,45224746,45218454,45217179,45210528,45207486,45206170,45204453,45204212	Gene ID= ENSG00000129534.13 TPM= 2.34 Transcript Type= NA
chr14	45203190	45253131	45203190	45253131	-	transcript1442.chr14.nnic@MIS18BP1	transcript1442.chr14.nnic	protein_coding	45253035,45246743,45242761,45242034,45237648,45231141,45227663,45226743,45223918,45218282,45217019,45210380,45206083,45204399,45203190	45253131,45247377,45242874,45242518,45237721,45231298,45227814,45226836,45224746,45218454,45217179,45210528,45206170,45204453,45204212	Gene ID= ENSG00000129534.13 TPM= 2.34 Transcript Type= NA
chr14	45203190	45253402	45203190	45253402	-	ENST00000310806.8@MIS18BP1	ENST00000310806.8	protein_coding	45253035,45246743,45242761,45242034,45237648,45235814,45232733,45231141,45227663,45226743,45223918,45218282,45217019,45210380,45206083,45204399,45203190	45253402,45247377,45242874,45242518,45237721,45235944,45232820,45231298,45227814,45226836,45224746,45218454,45217179,45210528,45206170,45204453,45204212	Gene ID= ENSG00000129534.13 TPM= 16.35 Transcript Type= protein_coding
chr14	45203837	45206444	45203837	45206444	-	ENST00000470424.1@MIS18BP1	ENST00000470424.1	protein_coding	45206083,45204399,45203837	45206444,45204453,45204212	Gene ID= ENSG00000129534.13 TPM= 1.17 Transcript Type= retained_intron
chr14	49583572	49586376	49583572	49586376	-	ENST00000245458.10@RPS29	ENST00000245458.10	protein_coding	49586285,49585950,49583572	49586376,49586049,49583675	Gene ID= ENSG00000213741.9 TPM= 310.58 Transcript Type= protein_coding
chr14	49583495	49584886	49583495	49584886	+	transcript1456.chr14.nnic@NA	transcript1456.chr14.nnic	NA	49583495	49584886	Gene ID= novel_gene_chr14_1457 TPM= 2.34 Transcript Type= NA
chr14	49598924	49614672	49598924	49614672	+	transcript1458.chr14.nic@LRR1	transcript1458.chr14.nic	protein_coding	49598924,49602370,49603552,49607400,49614256	49599203,49602468,49603618,49608121,49614672	Gene ID= ENSG00000165501.16 TPM= 2.34 Transcript Type= NA
chr14	49598697	49614672	49598697	49614672	+	ENST00000298288.10@LRR1	ENST00000298288.10	protein_coding	49598697,49602370,49607400,49614256	49599203,49602468,49608121,49614672	Gene ID= ENSG00000165501.16 TPM= 4.67 Transcript Type= protein_coding
chr14	49598761	49614670	49598761	49614670	+	ENST00000318317.8@LRR1	ENST00000318317.8	protein_coding	49598761,49602370,49614256	49599203,49602468,49614670	Gene ID= ENSG00000165501.16 TPM= 2.34 Transcript Type= protein_coding
chr14	49618519	49620685	49618519	49620685	-	ENST00000298289.6@RPL36AL	ENST00000298289.6	protein_coding	49620562,49618519	49620685,49619140	Gene ID= ENSG00000165502.6 TPM= 126.1 Transcript Type= protein_coding
chr14	49620795	49623481	49620795	49623481	+	ENST00000305386.3@MGAT2	ENST00000305386.3	protein_coding	49620795	49623481	Gene ID= ENSG00000168282.5 TPM= 10.51 Transcript Type= protein_coding
chr14	49625174	49635230	49625174	49635230	-	ENST00000406043.3@DNAAF2	ENST00000406043.3	protein_coding	49633287,49625174	49635230,49626048	Gene ID= ENSG00000165506.14 TPM= 16.35 Transcript Type= protein_coding
chr14	49625174	49635230	49625174	49635230	-	ENST00000298292.12@DNAAF2	ENST00000298292.12	protein_coding	49633287,49628012,49625174	49635230,49628155,49626048	Gene ID= ENSG00000165506.14 TPM= 10.51 Transcript Type= protein_coding
chr14	49631757	49634409	49631757	49634409	-	transcript1474.chr14.nnic@NA	transcript1474.chr14.nnic	NA	49631757	49634409	Gene ID= novel_gene_chr14_1475 TPM= 3.5 Transcript Type= NA
chr14	49693105	49753152	49693105	49753152	+	ENST00000359332.6@KLHDC1	ENST00000359332.6	protein_coding	49693105,49709159,49709709,49710263,49723874,49725686,49728926,49729490,49732704,49734589,49740098,49743753,49751586	49693290,49709229,49709826,49710381,49723952,49725769,49729009,49729548,49732816,49734661,49740182,49743805,49753152	Gene ID= ENSG00000197776.7 TPM= 4.67 Transcript Type= protein_coding
chr14	49693118	49753152	49693118	49753152	+	transcript1478.chr14.nnic@KLHDC1	transcript1478.chr14.nnic	protein_coding	49693118,49709159,49709709,49710263,49723874,49725686,49729490,49732704,49734589,49740098,49743753,49751586	49693290,49709229,49709826,49710381,49723952,49725769,49729548,49732816,49734661,49740182,49743805,49753152	Gene ID= ENSG00000197776.7 TPM= 2.34 Transcript Type= NA
chr14	49768080	49783115	49768080	49783115	+	transcript1506.chr14.nic@KLHDC2	transcript1506.chr14.nic	protein_coding	49768080,49771594,49774561,49777839,49778178,49778411,49779595,49780703,49782370,49782542,49782830	49768621,49771673,49774678,49777954,49778259,49778494,49780322,49780775,49782457,49782594,49783115	Gene ID= ENSG00000165516.10 TPM= 4.67 Transcript Type= NA
chr14	49768168	49783115	49768168	49783115	+	ENST00000555443.5@KLHDC2	ENST00000555443.5	protein_coding	49768168,49771594,49774561,49777839,49778178,49778411,49779595,49780213,49780703,49782370,49782542,49782830	49768621,49771673,49774678,49777954,49778259,49778494,49779806,49780322,49780775,49782457,49782594,49783115	Gene ID= ENSG00000165516.10 TPM= 14.01 Transcript Type= nonsense_mediated_decay
chr14	49782083	49853203	49782083	49853203	-	ENST00000298310.9@NEMF	ENST00000298310.9	protein_coding	49852695,49851807,49851563,49846140,49840718,49838139,49834363,49833423,49832207,49832051,49831299,49829349,49829054,49828616,49828291,49825867,49814754,49813988,49806021,49803237,49802669,49802453,49800420,49799636,49799475,49795791,49789496,49789146,49786718,49785220,49785092,49784925,49782083	49853203,49851875,49851665,49846265,49840866,49838206,49834449,49833496,49832277,49832126,49831361,49829426,49829262,49828807,49828354,49825955,49814857,49814050,49806133,49803294,49802727,49802573,49800696,49799678,49799524,49795944,49789573,49789343,49786750,49785320,49785135,49785004,49784713	Gene ID= ENSG00000165525.17 TPM= 2.34 Transcript Type= protein_coding
chr14	49891541	49893443	49891541	49893443	-	transcript1523.chr14.nnic@NA	transcript1523.chr14.nnic	NA	49891541	49893443	Gene ID= novel_gene_chr14_1524 TPM= 4.67 Transcript Type= NA
chr14	49893092	49897054	49893092	49897054	+	ENST00000298316.6@ARF6	ENST00000298316.6	protein_coding	49893092,49893256	49893157,49897054	Gene ID= ENSG00000165527.6 TPM= 293.07 Transcript Type= protein_coding
chr14	50108633	50116557	50108633	50116557	-	ENST00000395860.6@VCPKMT	ENST00000395860.6	protein_coding	50116287,50116069,50115839,50114285,50112615,50108633	50116557,50116179,50115911,50114404,50112719,50109713	Gene ID= ENSG00000100483.13 TPM= 3.5 Transcript Type= protein_coding
chr14	50108642	50116558	50108642	50116558	-	ENST00000484763.1@VCPKMT	ENST00000484763.1	protein_coding	50116080,50115839,50114285,50112615,50108642	50116558,50115911,50114404,50112719,50109713	Gene ID= ENSG00000100483.13 TPM= 1.17 Transcript Type= retained_intron
chr14	50156061	50231983	50156061	50231983	-	transcript1544.chr14.nic@SOS2	transcript1544.chr14.nic	protein_coding	50231197,50204284,50200953,50199691,50188497,50182463,50180572,50174454,50161482,50159431,50158565,50156061	50231983,50204409,50201084,50199855,50188700,50182606,50180682,50174552,50161609,50160086,50158646,50157121	Gene ID= ENSG00000100485.11 TPM= 2.34 Transcript Type= NA
chr14	50117120	50231558	50117120	50231558	-	ENST00000216373.9@SOS2	ENST00000216373.9	protein_coding	50231197,50204284,50200953,50199691,50188497,50182463,50180572,50174454,50161482,50159431,50158565,50156999,50153070,50150008,50145477,50145170,50139942,50138612,50134123,50130501,50129961,50120275,50117120	50231558,50204409,50201084,50199855,50188700,50182606,50180682,50174552,50161609,50160086,50158646,50157121,50153173,50150230,50145596,50145332,50140059,50138784,50134239,50130762,50130002,50120384,50118853	Gene ID= ENSG00000100485.11 TPM= 12.84 Transcript Type= protein_coding
chr14	50182375	50184887	50182375	50184887	+	transcript1547.chr14.nnic@NA	transcript1547.chr14.nnic	NA	50182375	50184887	Gene ID= novel_gene_chr14_1548 TPM= 4.67 Transcript Type= NA
chr14	50222706	50224896	50222706	50224896	+	transcript1549.chr14.nnic@NA	transcript1549.chr14.nnic	NA	50222706	50224896	Gene ID= novel_gene_chr14_1550 TPM= 3.5 Transcript Type= NA
chr14	50312321	50326248	50312321	50326248	+	transcript1560.chr14.nnic@ATP5S	transcript1560.chr14.nnic	protein_coding	50312321,50314591,50321483,50322511,50323945,50325609	50312389,50314626,50321594,50322719,50324116,50326248	Gene ID= ENSG00000125375.14 TPM= 2.34 Transcript Type= NA
chr14	50326266	50328814	50326266	50328814	-	transcript1570.chr14.nnic@NA	transcript1570.chr14.nnic	NA	50326266	50328814	Gene ID= novel_gene_chr14_1571 TPM= 2.34 Transcript Type= NA
chr14	50418525	50532609	50418525	50532609	-	ENST00000013125.8@MAP4K5	ENST00000013125.8	protein_coding	50532400,50531942,50504800,50486104,50485578,50482361,50476259,50476128,50475077,50468651,50466583,50464052,50462665,50456516,50448774,50447414,50446079,50445041,50443939,50443729,50442732,50440362,50440013,50437894,50437476,50434962,50434394,50429192,50428662,50425907,50423121,50418525	50532609,50532158,50504857,50486194,50485642,50482416,50476306,50476170,50475149,50468782,50466645,50464133,50462781,50456594,50448832,50447481,50446121,50445194,50444036,50443770,50442816,50440441,50440073,50438011,50437534,50435065,50434571,50429260,50428754,50425977,50423176,50420106	Gene ID= ENSG00000012983.11 TPM= 8.96 Transcript Type= protein_coding
chr14	50418525	50532677	50418525	50532677	-	transcript1577.chr14.nic@MAP4K5	transcript1577.chr14.nic	protein_coding	50532448,50531942,50504800,50486104,50485578,50482361,50476259,50476128,50475077,50468651,50466583,50464052,50462665,50456516,50448774,50447414,50446079,50445041,50443939,50443729,50442732,50440362,50440013,50437894,50437476,50434962,50434394,50429192,50428662,50425907,50423121,50418525	50532677,50532158,50504857,50486194,50485642,50482416,50476306,50476170,50475149,50468782,50466645,50464133,50462781,50456594,50448832,50447481,50446121,50445194,50444036,50443770,50442816,50440441,50440073,50438011,50437534,50435065,50434571,50429260,50428754,50425977,50423176,50420106	Gene ID= ENSG00000012983.11 TPM= 13.63 Transcript Type= NA
chr14	50533026	50633049	50533026	50633049	+	ENST00000441560.6@ATL1	ENST00000441560.6	protein_coding	50533026,50560127,50587831,50590941,50591535,50593846,50595576,50613259,50614373,50620599,50621843,50623177,50628031,50632229	50533367,50560299,50588078,50591075,50591639,50593896,50595632,50613351,50614511,50620726,50621899,50623248,50628462,50633049	Gene ID= ENSG00000198513.11 TPM= 1.17 Transcript Type= protein_coding
chr14	50662511	50668296	50662511	50668296	-	transcript1607.chr14.nic@SAV1	transcript1607.chr14.nic	protein_coding	50667874,50662511	50668296,50665619	Gene ID= ENSG00000151748.14 TPM= 4.67 Transcript Type= NA
chr14	50633636	50668331	50633636	50668331	-	ENST00000324679.4@SAV1	ENST00000324679.4	protein_coding	50667874,50665179,50644744,50640750,50633636	50668331,50665619,50645014,50640893,50635384	Gene ID= ENSG00000151748.14 TPM= 102.75 Transcript Type= protein_coding
chr14	50725828	50831159	50725828	50831159	-	transcript1620.chr14.nnic@NIN	transcript1620.chr14.nnic	protein_coding	50831006,50830464,50806737,50792712,50778765,50776949,50772949,50772301,50771332,50770852,50770388,50766780,50766307,50763826,50761790,50759857,50756492,50754742,50754563,50752518,50747992,50744243,50743416,50741582,50739308,50738140,50735516,50729523,50725828	50831159,50830517,50806818,50792881,50778804,50777139,50773095,50772468,50771468,50770992,50770562,50766890,50766396,50763964,50761911,50760359,50758630,50754867,50754632,50752733,50748105,50744365,50743529,50741728,50739487,50738286,50735617,50729723,50726066	Gene ID= ENSG00000100503.23 TPM= 3.74 Transcript Type= NA
chr14	50727236	50831150	50727236	50831150	-	transcript1624.chr14.nic@NIN	transcript1624.chr14.nic	protein_coding	50831006,50830464,50821874,50806737,50792712,50778765,50776949,50772949,50772301,50771332,50770852,50770388,50766780,50766307,50763826,50761790,50759857,50754742,50754563,50752518,50747992,50744243,50743416,50741582,50739308,50738140,50735516,50729523,50727236	50831150,50830517,50822077,50806818,50792881,50778804,50777139,50773095,50772468,50771468,50770992,50770562,50766890,50766396,50763964,50761911,50760359,50754867,50754632,50752733,50748105,50744365,50743529,50741728,50739487,50738286,50735617,50729723,50727751	Gene ID= ENSG00000100503.23 TPM= 3.15 Transcript Type= NA
chr14	50725833	50831121	50725833	50831121	-	ENST00000324330.13@NIN	ENST00000324330.13	protein_coding	50831006,50830464,50821874,50806737,50792712,50778765,50776949,50772949,50772301,50771332,50770852,50770388,50766780,50766307,50763826,50761790,50759857,50754742,50754563,50752518,50747992,50744243,50743416,50741582,50739308,50738140,50735516,50729523,50725833	50831121,50830517,50822077,50806818,50792881,50778804,50777139,50773095,50772468,50771468,50770992,50770562,50766890,50766396,50763964,50761911,50760359,50754867,50754632,50752733,50748105,50744365,50743529,50741728,50739487,50738286,50735617,50729723,50726066	Gene ID= ENSG00000100503.23 TPM= 3.74 Transcript Type= protein_coding
chr14	50725840	50831121	50725840	50831121	-	ENST00000382041.7@NIN	ENST00000382041.7	protein_coding	50831006,50830464,50821874,50806737,50792712,50778765,50776949,50772949,50772301,50771332,50770852,50770388,50766780,50766307,50763826,50761790,50759857,50756492,50754742,50754563,50752518,50747992,50744243,50743416,50741582,50739308,50738140,50735516,50729523,50725840	50831121,50830517,50822077,50806818,50792881,50778804,50777139,50773095,50772468,50771468,50770992,50770562,50766890,50766396,50763964,50761911,50760359,50758630,50754867,50754632,50752733,50748105,50744365,50743529,50741728,50739487,50738286,50735617,50729723,50726066	Gene ID= ENSG00000100503.23 TPM= 3.74 Transcript Type= protein_coding
chr14	50727236	50831121	50727236	50831121	-	ENST00000453196.5@NIN	ENST00000453196.5	protein_coding	50831006,50830464,50821874,50806737,50792712,50778765,50776949,50772949,50772301,50771332,50770852,50770388,50766780,50766307,50763826,50761790,50759857,50756492,50754742,50754563,50752518,50747992,50744243,50743416,50741582,50739308,50738140,50735516,50729523,50727236	50831121,50830517,50822077,50806818,50792881,50778804,50777139,50773095,50772468,50771468,50770992,50770562,50766890,50766396,50763964,50761911,50760359,50758630,50754867,50754632,50752733,50748105,50744365,50743529,50741728,50739487,50738286,50735617,50729723,50727751	Gene ID= ENSG00000100503.23 TPM= 4.32 Transcript Type= protein_coding
chr14	50905218	50944483	50905218	50944483	-	ENST00000544180.6@PYGL	ENST00000544180.6	protein_coding	50944161,50935107,50931673,50923969,50920956,50920541,50916962,50916642,50915825,50915336,50914701,50913029,50912156,50911978,50911730,50909895,50908821,50908271,50905218	50944483,50935185,50931776,50924100,50921067,50920623,50917105,50916734,50915971,50915499,50914815,50913130,50912303,50912036,50911871,50910102,50908955,50908337,50905556	Gene ID= ENSG00000100504.16 TPM= 5.25 Transcript Type= protein_coding
chr14	50905221	50944736	50905221	50944736	-	ENST00000216392.7@PYGL	ENST00000216392.7	protein_coding	50944161,50937736,50935107,50931673,50923969,50920956,50920541,50916962,50916642,50915825,50915336,50914701,50913029,50912156,50911978,50911730,50909895,50908821,50908271,50905221	50944736,50937837,50935185,50931776,50924100,50921067,50920623,50917105,50916734,50915971,50915499,50914815,50913130,50912303,50912036,50911871,50910102,50908955,50908337,50905556	Gene ID= ENSG00000100504.16 TPM= 44.95 Transcript Type= protein_coding
chr14	50923237	50944470	50923237	50944470	-	ENST00000530336.2@PYGL	ENST00000530336.2	protein_coding	50944161,50937736,50935107,50931673,50923237	50944470,50937837,50935185,50931776,50924100	Gene ID= ENSG00000100504.16 TPM= 1.17 Transcript Type= retained_intron
chr14	51240168	51257546	51240168	51257546	+	ENST00000457354.6@TMX1	ENST00000457354.6	protein_coding	51240168,51243856,51245313,51247092,51249326,51249468,51249693,51254341	51240444,51243971,51245358,51247220,51249371,51249569,51249765,51257546	Gene ID= ENSG00000139921.12 TPM= 14.01 Transcript Type= protein_coding
chr14	51651858	51730727	51651858	51730727	+	ENST00000395718.6@FRMD6	ENST00000395718.6	protein_coding	51651858,51689691,51698142,51701056,51702512,51704749,51708078,51711531,51712483,51715325,51720055,51721949,51725779,51727745	51651996,51689935,51698232,51701135,51702588,51704935,51708233,51711596,51712551,51715499,51720390,51722080,51725870,51730727	Gene ID= ENSG00000139926.15 TPM= 15.18 Transcript Type= protein_coding
chr14	51860414	51969794	51860414	51969794	+	ENST00000335281.8@GNG2	ENST00000335281.8	protein_coding	51860414,51950650,51966559	51860790,51950765,51969794	Gene ID= ENSG00000186469.8 TPM= 10.51 Transcript Type= protein_coding
chr14	51989615	52004653	51989615	52004653	+	ENST00000556760.5@C14orf166	ENST00000556760.5	protein_coding	51989615,51991317,51993723,51998494,51999708,52001798,52004240,52004362	51989700,51991441,51993822,51998580,51999796,52001866,52004242,52004653	Gene ID= ENSG00000087302.8 TPM= 1.17 Transcript Type= protein_coding
chr14	52004803	52068994	52004803	52068994	-	ENST00000216286.9@NID2	ENST00000216286.9	protein_coding	52068767,52067858,52060124,52054020,52053579,52042782,52042105,52040651,52038747,52029547,52028722,52027201,52020059,52019061,52015054,52014287,52011554,52010876,52007810,52006537,52005737,52004803	52068994,52068163,52060356,52054321,52053938,52042931,52042350,52040851,52038977,52029690,52028850,52027344,52020178,52019294,52015275,52014456,52011683,52011047,52007967,52006660,52005849,52005496	Gene ID= ENSG00000087303.17 TPM= 12.84 Transcript Type= protein_coding
chr14	52311111	52315459	52311111	52315459	-	transcript1671.chr14.nnic@NA	transcript1671.chr14.nnic	NA	52311111	52315459	Gene ID= novel_gene_chr14_1672 TPM= 2.34 Transcript Type= NA
chr14	52313538	52315471	52313538	52315471	-	transcript1669.chr14.nnic@NA	transcript1669.chr14.nnic	NA	52313538	52315471	Gene ID= novel_gene_chr14_1670 TPM= 4.67 Transcript Type= NA
chr14	52430590	52552506	52430590	52552506	-	ENST00000281741.8@TXNDC16	ENST00000281741.8	protein_coding	52552316,52544264,52543398,52542371,52537599,52536719,52519172,52514880,52511240,52490839,52490391,52488363,52482822,52482230,52470512,52470037,52457090,52455324,52440564,52439204,52430590	52552506,52544371,52543630,52542453,52537672,52536793,52519293,52514970,52511390,52491005,52490451,52488486,52482965,52482289,52470680,52470173,52457174,52455462,52440724,52439394,52432587	Gene ID= ENSG00000087301.8 TPM= 3.5 Transcript Type= protein_coding
chr14	52553148	52637713	52553148	52637713	+	ENST00000321662.10@GPR137C	ENST00000321662.10	protein_coding	52553148,52598272,52600113,52632160,52633530,52633828,52634938	52553591,52598315,52600341,52632309,52633655,52633946,52637713	Gene ID= ENSG00000180998.11 TPM= 1.17 Transcript Type= protein_coding
chr14	52641891	52695723	52641891	52695723	-	transcript1678.chr14.nnic@ERO1A	transcript1678.chr14.nnic	protein_coding	52695368,52683788,52682325,52678434,52671795,52671630,52667187,52666375,52663801,52661293,52658124,52657917,52653069,52652239,52646375,52646154,52641891	52695723,52683907,52682408,52678472,52671871,52671703,52667225,52666495,52663847,52661304,52658150,52658009,52653315,52652308,52646461,52646287,52643630	Gene ID= ENSG00000197930.12 TPM= 2.34 Transcript Type= NA
chr14	52707199	52727991	52707199	52727991	+	transcript1696.chr14.nic@PSMC6	transcript1696.chr14.nic	protein_coding	52707199,52708309,52708483,52708764,52709575,52711410,52713881,52718081,52718229,52718977,52720861,52721110,52723965,52727499	52707304,52708388,52708522,52708816,52711168,52711524,52713968,52718142,52718352,52719038,52720981,52721190,52724036,52727991	Gene ID= ENSG00000100519.11 TPM= 3.5 Transcript Type= NA
chr14	52707172	52728587	52707172	52728587	+	ENST00000445930.6@PSMC6	ENST00000445930.6	protein_coding	52707172,52708309,52708483,52708764,52711101,52711410,52713881,52718081,52718229,52718977,52720861,52721110,52723965,52727499	52707304,52708388,52708522,52708816,52711168,52711524,52713968,52718142,52718352,52719038,52720981,52721190,52724036,52728587	Gene ID= ENSG00000100519.11 TPM= 4.09 Transcript Type= protein_coding
chr14	52707204	52727991	52707204	52727991	+	ENST00000606149.5@PSMC6	ENST00000606149.5	protein_coding	52707204,52708309,52708483,52708764,52711101,52711410,52713881,52718081,52718229,52718977,52720861,52721110,52723965,52727499	52707304,52708388,52708522,52708816,52711168,52711524,52713968,52718142,52718352,52719038,52720981,52721190,52724036,52727991	Gene ID= ENSG00000100519.11 TPM= 9.92 Transcript Type= protein_coding
chr14	52730160	52774941	52730160	52774941	+	transcript1711.chr14.nnic@STYX	transcript1711.chr14.nnic	protein_coding	52730160,52744852,52746426,52750683,52757319,52757743,52757874,52759682,52768840,52771033	52730531,52744884,52746479,52750780,52757355,52757782,52757924,52759754,52768933,52774941	Gene ID= ENSG00000198252.11 TPM= 3.5 Transcript Type= NA
chr14	52730182	52774998	52730182	52774998	+	ENST00000354586.4@STYX	ENST00000354586.4	protein_coding	52730182,52744852,52746426,52750683,52756551,52757319,52757743,52757874,52759682,52768840,52771033	52730531,52744884,52746479,52750780,52756611,52757355,52757782,52757924,52759754,52768933,52774998	Gene ID= ENSG00000198252.11 TPM= 8.17 Transcript Type= protein_coding
chr14	52732268	52733215	52732268	52733215	-	transcript1722.chr14.nnic@NA	transcript1722.chr14.nnic	NA	52732268	52733215	Gene ID= novel_gene_chr14_1723 TPM= 2.34 Transcript Type= NA
chr14	52775188	52791678	52775188	52791678	-	transcript1713.chr14.nnic@GNPNAT1	transcript1713.chr14.nnic	protein_coding	52791428,52784497,52783423,52781784,52780679,52776835,52775188	52791678,52784664,52783485,52781911,52780740,52778458,52775941	Gene ID= ENSG00000100522.8 TPM= 3.5 Transcript Type= NA
chr14	52775194	52791601	52775194	52791601	-	ENST00000216410.7@GNPNAT1	ENST00000216410.7	protein_coding	52791428,52784497,52783423,52781784,52780679,52775194	52791601,52784664,52783485,52781911,52780740,52778458	Gene ID= ENSG00000100522.8 TPM= 9.34 Transcript Type= protein_coding
chr14	52857272	52951086	52857272	52951086	-	transcript1732.chr14.nic@FERMT2	transcript1732.chr14.nic	protein_coding	52950412,52919123,52893293,52881244,52881036,52878582,52875223,52874177,52872799,52864747,52864401,52860341,52859573,52857272	52951086,52919356,52893427,52881469,52881138,52878689,52875357,52874226,52872923,52864853,52864622,52860465,52859714,52858550	Gene ID= ENSG00000073712.14 TPM= 11.29 Transcript Type= NA
chr14	52877575	52951086	52877575	52951086	-	transcript1736.chr14.nic@FERMT2	transcript1736.chr14.nic	protein_coding	52950921,52950412,52919123,52893293,52881244,52881036,52877575	52951086,52950577,52919356,52893427,52881469,52881138,52878689	Gene ID= ENSG00000073712.14 TPM= 3.5 Transcript Type= NA
chr14	52857268	52951097	52857268	52951097	-	ENST00000341590.7@FERMT2	ENST00000341590.7	protein_coding	52950921,52950412,52919123,52893293,52881244,52881036,52878582,52875223,52874177,52872799,52864747,52864401,52860341,52859573,52857268	52951097,52950577,52919356,52893427,52881469,52881138,52878689,52875357,52874226,52872923,52864853,52864622,52860465,52859714,52858550	Gene ID= ENSG00000073712.14 TPM= 65 Transcript Type= protein_coding
chr14	52857268	52951035	52857268	52951035	-	ENST00000395631.6@FERMT2	ENST00000395631.6	protein_coding	52950828,52950412,52919123,52893293,52881244,52881036,52878582,52875223,52874177,52872799,52864747,52864401,52860341,52859573,52857268	52951035,52950577,52919356,52893427,52881469,52881138,52878689,52875357,52874226,52872923,52864853,52864622,52860465,52859714,52858550	Gene ID= ENSG00000073712.14 TPM= 8.96 Transcript Type= protein_coding
chr14	53043968	53153282	53043968	53153282	-	ENST00000357758.3@DDHD1	ENST00000357758.3	protein_coding	53152261,53103683,53093316,53091785,53073741,53072597,53062943,53061126,53058477,53055660,53054438,53043968	53153282,53103856,53093444,53091932,53073847,53072703,53063205,53061201,53058626,53055912,53054629,53046949	Gene ID= ENSG00000100523.14 TPM= 7.01 Transcript Type= protein_coding
chr14	53949739	53954552	53949739	53954552	-	ENST00000417573.5@BMP4	ENST00000417573.5	protein_coding	53954421,53953276,53951853,53949739	53954552,53953400,53952229,53950888	Gene ID= ENSG00000125378.15 TPM= 1.17 Transcript Type= protein_coding
chr14	53949736	53956811	53949736	53956811	-	ENST00000559087.5@BMP4	ENST00000559087.5	protein_coding	53956759,53953276,53951853,53949736	53956811,53953400,53952229,53950888	Gene ID= ENSG00000125378.15 TPM= 1.17 Transcript Type= protein_coding
chr14	53949741	53953455	53949741	53953455	-	ENST00000558984.1@BMP4	ENST00000558984.1	protein_coding	53953276,53951853,53949741	53953455,53952229,53950888	Gene ID= ENSG00000125378.15 TPM= 1.17 Transcript Type= protein_coding
chr14	53949736	53956811	53949736	53956811	-	ENST00000245451.8@BMP4	ENST00000245451.8	protein_coding	53956550,53953276,53951853,53949736	53956811,53953400,53952229,53950888	Gene ID= ENSG00000125378.15 TPM= 5.84 Transcript Type= protein_coding
chr14	54474485	54489196	54474485	54489196	-	ENST00000358056.7@GMFB	ENST00000358056.7	protein_coding	54488925,54483671,54482153,54481409,54480874,54479786,54474485	54489196,54483767,54482202,54481458,54480956,54479859,54478159	Gene ID= ENSG00000197045.12 TPM= 67.72 Transcript Type= protein_coding
chr14	54509828	54539309	54509828	54539309	+	ENST00000216420.11@CGRRF1	ENST00000216420.11	protein_coding	54509828,54522454,54530049,54530903,54537722,54538063	54510063,54522593,54530226,54531050,54537829,54539309	Gene ID= ENSG00000100532.11 TPM= 23.35 Transcript Type= protein_coding
chr14	54842016	54902852	54842016	54902852	-	ENST00000491895.6@GCH1	ENST00000491895.6	protein_coding	54902321,54865327,54859681,54847099,54845768,54842016	54902852,54865436,54859736,54847130,54845852,54844143	Gene ID= ENSG00000131979.18 TPM= 13.43 Transcript Type= protein_coding
chr14	54842017	54902811	54842017	54902811	-	ENST00000254299.8@GCH1	ENST00000254299.8	protein_coding	54902321,54865327,54859681,54847099,54845768,54842017	54902811,54865436,54859736,54847130,54845852,54844143	Gene ID= ENSG00000131979.18 TPM= 1.75 Transcript Type= processed_transcript
chr14	55027248	55046708	55027248	55046708	+	ENST00000555846.1@SOCS4	ENST00000555846.1	protein_coding	55027248,55031863,55042952	55027471,55031991,55046708	Gene ID= ENSG00000180008.8 TPM= 2.34 Transcript Type= protein_coding
chr14	55027230	55049488	55027230	55049488	+	ENST00000395472.2@SOCS4	ENST00000395472.2	protein_coding	55027230,55042952	55027471,55049488	Gene ID= ENSG00000180008.8 TPM= 3.5 Transcript Type= protein_coding
chr14	55051631	55070192	55051631	55070192	+	ENST00000395468.8@MAPK1IP1L	ENST00000395468.8	protein_coding	55051631,55061680,55062618,55064616	55051803,55061701,55063325,55070192	Gene ID= ENSG00000168175.14 TPM= 29.19 Transcript Type= protein_coding
chr14	55051643	55064583	55051643	55064583	+	transcript1813.chr14.nic@MAPK1IP1L	transcript1813.chr14.nic	protein_coding	55051643,55061680,55062618	55051803,55061701,55064583	Gene ID= ENSG00000168175.14 TPM= 9.34 Transcript Type= NA
chr14	55129246	55145413	55129246	55145413	+	transcript1820.chr14.nnic@LGALS3	transcript1820.chr14.nnic	protein_coding	55129246,55130586,55137370,55138045,55140275,55142584,55145116	55129300,55130926,55137391,55138368,55140363,55142749,55145413	Gene ID= ENSG00000131981.15 TPM= 35.62 Transcript Type= NA
chr14	55129044	55145403	55129044	55145403	+	ENST00000254301.13@LGALS3	ENST00000254301.13	protein_coding	55129044,55137370,55138045,55140275,55142584,55145116	55129300,55137391,55138368,55140363,55142749,55145403	Gene ID= ENSG00000131981.15 TPM= 560.22 Transcript Type= protein_coding
chr14	55129252	55134998	55129252	55134998	+	transcript1836.chr14.nnic@NA	transcript1836.chr14.nnic	NA	55129252	55134998	Gene ID= novel_gene_chr14_1837 TPM= 10.51 Transcript Type= NA
chr14	55271303	55353609	55271303	55353609	+	ENST00000313833.4@FBXO34	ENST00000313833.4	protein_coding	55271303,55350381	55271537,55353609	Gene ID= ENSG00000178974.9 TPM= 79.4 Transcript Type= protein_coding
chr14	55271379	55353602	55271379	55353602	+	transcript1848.chr14.nnic@FBXO34	transcript1848.chr14.nnic	protein_coding	55271379,55350381	55271984,55353602	Gene ID= ENSG00000178974.9 TPM= 4.67 Transcript Type= NA
chr14	55366392	55411858	55366392	55411858	-	ENST00000247178.5@ATG14	ENST00000247178.5	protein_coding	55411602,55397372,55395940,55390911,55385859,55381962,55380573,55377984,55377819,55366392	55411858,55397434,55395982,55390992,55386096,55382191,55380690,55378074,55377904,55369925	Gene ID= ENSG00000126775.8 TPM= 7.01 Transcript Type= protein_coding
chr14	55394006	55411831	55394006	55411831	-	transcript1844.chr14.nic@ATG14	transcript1844.chr14.nic	protein_coding	55411602,55397372,55394006	55411831,55397434,55395982	Gene ID= ENSG00000126775.8 TPM= 3.5 Transcript Type= NA
chr14	55580181	55684579	55580181	55684579	+	transcript1855.chr14.nic@KTN1	transcript1855.chr14.nic	protein_coding	55580181,55601757,55612019,55616517,55617964,55619182,55627912,55629957,55633235,55634526,55636449,55637198,55637779,55639185,55639913,55640374,55640933,55641127,55641692,55646973,55648025,55648802,55649776,55650328,55650569,55651890,55652850,55653017,55653559,55656042,55658546,55659666,55661522,55663955,55667241,55670729,55671566,55671785,55672630,55672929,55673172,55675835,55678352,55679565,55684099	55580354,55601880,55612571,55616654,55618134,55619312,55628028,55630097,55633341,55634658,55636536,55637364,55637847,55639222,55640003,55640442,55640970,55641208,55641760,55647007,55648115,55648870,55649813,55650418,55650637,55651927,55652940,55653085,55653596,55656132,55658614,55659703,55661612,55664041,55667330,55670809,55671655,55671877,55672701,55673012,55673255,55675918,55678444,55679685,55684579	Gene ID= ENSG00000126777.17 TPM= 11.68 Transcript Type= NA
chr14	55580181	55684579	55580181	55684579	+	transcript1861.chr14.nic@KTN1	transcript1861.chr14.nic	protein_coding	55580181,55601757,55612019,55616517,55617964,55619182,55627912,55629957,55633235,55634526,55636449,55637198,55637779,55639185,55639913,55640374,55640933,55641127,55641692,55646973,55648025,55648802,55649776,55650328,55650569,55651890,55652850,55653017,55653559,55656042,55658546,55659666,55661522,55663955,55667241,55670729,55671566,55671785,55672630,55672929,55675835,55678352,55679565,55684099	55580354,55601880,55612571,55616654,55618134,55619312,55628028,55630097,55633341,55634658,55636536,55637364,55637847,55639222,55640003,55640442,55640970,55641208,55641760,55647007,55648115,55648870,55649813,55650418,55650637,55651927,55652940,55653085,55653596,55656132,55658614,55659703,55661612,55664041,55667330,55670809,55671655,55671877,55672701,55673012,55675918,55678444,55679685,55684579	Gene ID= ENSG00000126777.17 TPM= 15.18 Transcript Type= NA
chr14	55580181	55684579	55580181	55684579	+	transcript1864.chr14.nic@KTN1	transcript1864.chr14.nic	protein_coding	55580181,55601757,55612019,55616517,55617964,55619182,55627912,55629957,55633235,55634526,55636449,55637198,55637779,55639185,55639913,55640374,55640933,55641127,55641692,55646973,55648025,55648802,55649776,55650328,55650569,55651890,55652850,55653017,55653559,55656042,55658546,55659666,55661522,55667241,55670729,55671566,55671785,55672630,55672929,55673172,55675835,55678352,55679565,55684099	55580354,55601880,55612571,55616654,55618134,55619312,55628028,55630097,55633341,55634658,55636536,55637364,55637847,55639222,55640003,55640442,55640970,55641208,55641760,55647007,55648115,55648870,55649813,55650418,55650637,55651927,55652940,55653085,55653596,55656132,55658614,55659703,55661612,55667330,55670809,55671655,55671877,55672701,55673012,55673255,55675918,55678444,55679685,55684579	Gene ID= ENSG00000126777.17 TPM= 18.68 Transcript Type= NA
chr14	55580202	55684579	55580202	55684579	+	transcript1868.chr14.nic@KTN1	transcript1868.chr14.nic	protein_coding	55580202,55612019,55616517,55617964,55619182,55627912,55629957,55633235,55634526,55636449,55637198,55637779,55639185,55639913,55640374,55640933,55641127,55641692,55646973,55648025,55648802,55649776,55650328,55650569,55651890,55652850,55653017,55653559,55656042,55658546,55659666,55661522,55663955,55667241,55670729,55671566,55671785,55672630,55672929,55675835,55678352,55679565,55684099	55580354,55612571,55616654,55618134,55619312,55628028,55630097,55633341,55634658,55636536,55637364,55637847,55639222,55640003,55640442,55640970,55641208,55641760,55647007,55648115,55648870,55649813,55650418,55650637,55651927,55652940,55653085,55653596,55656132,55658614,55659703,55661612,55664041,55667330,55670809,55671655,55671877,55672701,55673012,55675918,55678444,55679685,55684579	Gene ID= ENSG00000126777.17 TPM= 55.27 Transcript Type= NA
chr14	55580194	55684579	55580194	55684579	+	transcript1870.chr14.nic@KTN1	transcript1870.chr14.nic	protein_coding	55580194,55612019,55616517,55617964,55619182,55627912,55629957,55633235,55634526,55636449,55637198,55637779,55639185,55639913,55640374,55640933,55641127,55641692,55646973,55648025,55648802,55649776,55650328,55650569,55651890,55652850,55653017,55653559,55656042,55658546,55659666,55661522,55667241,55670729,55671566,55671785,55672630,55672929,55673172,55675835,55678352,55679565,55684099	55580354,55612571,55616654,55618134,55619312,55628028,55630097,55633341,55634658,55636536,55637364,55637847,55639222,55640003,55640442,55640970,55641208,55641760,55647007,55648115,55648870,55649813,55650418,55650637,55651927,55652940,55653085,55653596,55656132,55658614,55659703,55661612,55667330,55670809,55671655,55671877,55672701,55673012,55673255,55675918,55678444,55679685,55684579	Gene ID= ENSG00000126777.17 TPM= 45.93 Transcript Type= NA
chr14	55580181	55684579	55580181	55684579	+	transcript1873.chr14.nic@KTN1	transcript1873.chr14.nic	protein_coding	55580181,55601757,55612019,55616517,55617964,55619182,55627912,55629957,55633235,55634526,55636449,55637198,55637779,55639185,55639913,55640374,55640933,55641127,55641692,55646973,55648025,55648802,55649776,55650328,55650569,55651890,55652850,55653017,55653559,55656042,55658546,55659666,55661522,55667241,55670729,55671566,55671785,55672630,55672929,55675835,55678352,55679565,55684099	55580354,55601880,55612571,55616654,55618134,55619312,55628028,55630097,55633341,55634658,55636536,55637364,55637847,55639222,55640003,55640442,55640970,55641208,55641760,55647007,55648115,55648870,55649813,55650418,55650637,55651927,55652940,55653085,55653596,55656132,55658614,55659703,55661612,55667330,55670809,55671655,55671877,55672701,55673012,55675918,55678444,55679685,55684579	Gene ID= ENSG00000126777.17 TPM= 17.51 Transcript Type= NA
chr14	55580317	55684579	55580317	55684579	+	ENST00000395314.7@KTN1	ENST00000395314.7	protein_coding	55580317,55612019,55616517,55617964,55619182,55627912,55629957,55633235,55634526,55636449,55637198,55637779,55639185,55639913,55640374,55640933,55641127,55641692,55646973,55648025,55648802,55649776,55650328,55650569,55651890,55652850,55653017,55653559,55656042,55658546,55659666,55661522,55663955,55667241,55670729,55671566,55671785,55672630,55672929,55673172,55675835,55678352,55679565,55684099	55580354,55612571,55616654,55618134,55619312,55628028,55630097,55633341,55634658,55636536,55637364,55637847,55639222,55640003,55640442,55640970,55641208,55641760,55647007,55648115,55648870,55649813,55650418,55650637,55651927,55652940,55653085,55653596,55656132,55658614,55659703,55661612,55664041,55667330,55670809,55671655,55671877,55672701,55673012,55673255,55675918,55678444,55679685,55684579	Gene ID= ENSG00000126777.17 TPM= 5.84 Transcript Type= protein_coding
chr14	55580315	55684579	55580315	55684579	+	ENST00000438792.6@KTN1	ENST00000438792.6	protein_coding	55580315,55612019,55616517,55617964,55619182,55627912,55629957,55633235,55634526,55636449,55637198,55637779,55639185,55639913,55640374,55640933,55641127,55641692,55646973,55648025,55648802,55649776,55650328,55650569,55651890,55652850,55653017,55653559,55656042,55658546,55659666,55661522,55667241,55670729,55671566,55671785,55672630,55672929,55675835,55678352,55679565,55684099	55580354,55612571,55616654,55618134,55619312,55628028,55630097,55633341,55634658,55636536,55637364,55637847,55639222,55640003,55640442,55640970,55641208,55641760,55647007,55648115,55648870,55649813,55650418,55650637,55651927,55652940,55653085,55653596,55656132,55658614,55659703,55661612,55667330,55670809,55671655,55671877,55672701,55673012,55675918,55678444,55679685,55684579	Gene ID= ENSG00000126777.17 TPM= 10.51 Transcript Type= protein_coding
chr14	56579793	56649515	56579793	56649515	+	ENST00000261556.10@TMEM260	ENST00000261556.10	protein_coding	56579793,56585001,56585761,56603815,56605570,56609106,56612245,56615944,56617183,56618594,56621531,56625382,56632995,56634899,56636508,56647243	56580074,56585032,56585912,56603992,56605683,56609285,56612285,56616027,56617297,56618763,56621702,56625530,56633171,56634952,56636598,56649515	Gene ID= ENSG00000070269.13 TPM= 15.18 Transcript Type= protein_coding
chr14	57200507	57269008	57200507	57269008	-	ENST00000621441.4@EXOC5	ENST00000621441.4	protein_coding	57268622,57247618,57246711,57244165,57239595,57237338,57235711,57233988,57233743,57232667,57231506,57229734,57222308,57219322,57217982,57209953,57209567,57200507	57269008,57247712,57246858,57244359,57239659,57237366,57235820,57234032,57233883,57232749,57231715,57229881,57222416,57219442,57218068,57210061,57209782,57208797	Gene ID= ENSG00000070367.15 TPM= 11.68 Transcript Type= protein_coding
chr14	57236288	57268893	57236288	57268893	-	transcript1934.chr14.nic@EXOC5	transcript1934.chr14.nic	protein_coding	57268622,57247618,57246711,57244165,57239595,57236288	57268893,57247712,57246858,57244359,57239659,57237366	Gene ID= ENSG00000070367.15 TPM= 2.34 Transcript Type= NA
chr14	57390804	57412746	57390804	57412746	+	transcript1944.chr14.nic@NAA30	transcript1944.chr14.nic	protein_coding	57390804,57396752,57399828,57409379	57391728,57396875,57399883,57412746	Gene ID= ENSG00000139977.13 TPM= 9.34 Transcript Type= NA
chr14	57390553	57415917	57390553	57415917	+	ENST00000556492.5@NAA30	ENST00000556492.5	protein_coding	57390553,57390957,57396752,57399828,57409379	57390705,57391728,57396875,57399883,57415917	Gene ID= ENSG00000139977.13 TPM= 5.84 Transcript Type= protein_coding
chr14	58000761	58152213	58000761	58152213	-	ENST00000267485.7@C14orf37	ENST00000267485.7	protein_coding	58152075,58137990,58133090,58131512,58096724,58012119,58005048,58000761	58152213,58139414,58133341,58131721,58096981,58012150,58005182,58004804	Gene ID= ENSG00000139971.15 TPM= 1.17 Transcript Type= protein_coding
chr14	58200080	58234760	58200080	58234760	+	ENST00000545307.6@ACTR10	ENST00000545307.6	protein_coding	58200080,58202855,58207936,58208999,58211292,58213641,58215205,58219694,58223622,58223783,58230399,58232066,58234370	58200294,58202927,58208018,58209107,58211410,58213698,58215284,58219729,58223701,58223856,58230480,58232267,58234760	Gene ID= ENSG00000131966.13 TPM= 22.18 Transcript Type= nonsense_mediated_decay
chr14	58200138	58235636	58200138	58235636	+	ENST00000254286.8@ACTR10	ENST00000254286.8	protein_coding	58200138,58202855,58207936,58208999,58211292,58213631,58215205,58219694,58223622,58223783,58230399,58232066,58234370	58200294,58202927,58208018,58209107,58211399,58213698,58215284,58219729,58223701,58223856,58230480,58232267,58235636	Gene ID= ENSG00000131966.13 TPM= 4.67 Transcript Type= protein_coding
chr14	58244831	58272007	58244831	58272007	+	ENST00000216455.8@PSMA3	ENST00000216455.8	protein_coding	58244831,58247750,58252119,58257745,58257925,58260948,58263705,58267474,58270418,58270934,58271851	58244941,58247832,58252242,58257846,58257998,58261020,58263770,58267520,58270485,58270998,58272007	Gene ID= ENSG00000100567.12 TPM= 87.57 Transcript Type= protein_coding
chr14	58244856	58258454	58244856	58258454	+	ENST00000553665.5@PSMA3	ENST00000553665.5	protein_coding	58244856,58247750,58252119,58257745,58257925	58244941,58247832,58252242,58257846,58258454	Gene ID= ENSG00000100567.12 TPM= 1.17 Transcript Type= retained_intron
chr14	58273932	58298129	58273932	58298129	-	transcript1990.chr14.nic@PSMA3-AS1	transcript1990.chr14.nic	antisense_RNA	58297955,58293766,58291635,58273932	58298129,58295811,58291707,58274135	Gene ID= ENSG00000257621.7 TPM= 4.67 Transcript Type= NA
chr14	58271536	58274034	58271536	58274034	+	transcript1997.chr14.nnic@NA	transcript1997.chr14.nnic	NA	58271536	58274034	Gene ID= novel_gene_chr14_1998 TPM= 80.56 Transcript Type= NA
chr14	58298385	58373733	58298385	58373733	+	ENST00000355431.7@ARID4A	ENST00000355431.7	protein_coding	58298385,58299798,58301580,58304944,58306022,58318542,58318711,58323485,58328237,58329528,58330003,58344695,58346411,58347020,58347647,58351073,58353658,58359132,58360901,58364170,58365518,58366024,58366883,58371886	58298700,58299860,58301690,58305009,58306112,58318621,58318805,58323617,58328316,58329604,58330169,58344767,58346505,58347117,58347878,58351323,58353855,58359216,58361042,58365300,58365622,58366230,58367029,58373733	Gene ID= ENSG00000032219.18 TPM= 5.84 Transcript Type= protein_coding
chr14	58408494	58427614	58408494	58427614	-	ENST00000395159.6@TIMM9	ENST00000395159.6	protein_coding	58427392,58427054,58424008,58411907,58410843,58408494	58427614,58427242,58424095,58411971,58410938,58409168	Gene ID= ENSG00000100575.13 TPM= 5.84 Transcript Type= protein_coding
chr14	58408603	58427527	58408603	58427527	-	ENST00000216463.8@TIMM9	ENST00000216463.8	protein_coding	58427392,58427054,58424008,58410843,58408603	58427527,58427242,58424095,58410938,58409168	Gene ID= ENSG00000100575.13 TPM= 1.17 Transcript Type= processed_transcript
chr14	58427709	58548122	58427709	58548122	+	transcript2010.chr14.nic@KIAA0586	transcript2010.chr14.nic	protein_coding	58427709,58429363,58430648,58432388,58442706,58443954,58448340,58450579,58453350,58456702,58457759,58458473,58459843,58460986,58465835,58467735,58470613,58472199,58474607,58477123,58482513,58487007,58487887,58488621,58490164,58492144,58498783,58508555,58512522,58540071,58543883,58547781	58428463,58429433,58430717,58432457,58442880,58444175,58448493,58450746,58453473,58456810,58457979,58458545,58460070,58461160,58466029,58467922,58470723,58472279,58474797,58477241,58482712,58487166,58488109,58488874,58490240,58492275,58498960,58508709,58512627,58540136,58543967,58548122	Gene ID= ENSG00000100578.14 TPM= 5.84 Transcript Type= NA
chr14	59188712	59369753	59188712	59369753	+	transcript2022.chr14.nnic@DAAM1	transcript2022.chr14.nnic	protein_coding	59188712,59263441,59291217,59315280,59320490,59322892,59324128,59324351,59325664,59325960,59326510,59326933,59330501,59331209,59331813,59340074,59347539,59352526,59353876,59355165,59359397,59360802,59363651,59367429,59368650	59188914,59263660,59291306,59315351,59320584,59323225,59324238,59324454,59325730,59326077,59326648,59326991,59330688,59331508,59331920,59340180,59347623,59352632,59353964,59355333,59359504,59360862,59363782,59367599,59369753	Gene ID= ENSG00000100592.15 TPM= 3.5 Transcript Type= NA
chr14	59188680	59369753	59188680	59369753	+	ENST00000360909.7@DAAM1	ENST00000360909.7	protein_coding	59188680,59263441,59291217,59315280,59320490,59322892,59324128,59324351,59325664,59325960,59326510,59326933,59330501,59331209,59331813,59340074,59347539,59352526,59353876,59355165,59359397,59360802,59363651,59367429,59368650	59188768,59263660,59291306,59315351,59320584,59323225,59324238,59324454,59325730,59326077,59326648,59326991,59330688,59331508,59331920,59340180,59347623,59352632,59353964,59355333,59359504,59360862,59363782,59367599,59369753	Gene ID= ENSG00000100592.15 TPM= 21.02 Transcript Type= protein_coding
chr14	59188646	59266161	59188646	59266161	+	ENST00000556596.1@DAAM1	ENST00000556596.1	protein_coding	59188646,59263441	59188768,59266161	Gene ID= ENSG00000100592.15 TPM= 1.17 Transcript Type= retained_intron
chr14	59472617	59484430	59472617	59484430	-	ENST00000247194.8@L3HYPDH	ENST00000247194.8	protein_coding	59483809,59479182,59476092,59475869,59472617	59484430,59479351,59476214,59476006,59473090	Gene ID= ENSG00000126790.11 TPM= 3.5 Transcript Type= protein_coding
chr14	59462049	59464997	59462049	59464997	-	transcript2034.chr14.nnic@NA	transcript2034.chr14.nnic	NA	59462049	59464997	Gene ID= novel_gene_chr14_2035 TPM= 3.5 Transcript Type= NA
chr14	59484443	59504715	59484443	59504715	+	ENST00000261247.13@JKAMP	ENST00000261247.13	protein_coding	59484443,59486713,59487674,59495018,59498727,59501191,59503854	59484593,59486804,59487828,59495224,59498908,59501267,59504715	Gene ID= ENSG00000050130.17 TPM= 58.38 Transcript Type= protein_coding
chr14	59484545	59504705	59484545	59504705	+	ENST00000554271.5@JKAMP	ENST00000554271.5	protein_coding	59484545,59486713,59487674,59495018,59498727,59501191,59503854	59485116,59486804,59487828,59495224,59498908,59501267,59504705	Gene ID= ENSG00000050130.17 TPM= 2.34 Transcript Type= protein_coding
chr14	59484443	59505404	59484443	59505404	+	ENST00000616435.4@JKAMP	ENST00000616435.4	protein_coding	59484443,59486713,59487674,59495018,59498727,59503854	59484593,59486804,59487828,59495224,59498908,59505404	Gene ID= ENSG00000050130.17 TPM= 3.5 Transcript Type= protein_coding
chr14	59484503	59504703	59484503	59504703	+	ENST00000425728.6@JKAMP	ENST00000425728.6	protein_coding	59484503,59486731,59487674,59495018,59498727,59501191,59503854	59484593,59486804,59487828,59495224,59498908,59501267,59504703	Gene ID= ENSG00000050130.17 TPM= 18.68 Transcript Type= protein_coding
chr14	60091919	60134814	60091919	60134814	+	ENST00000406854.5@PCNX4	ENST00000406854.5	protein_coding	60091919,60107586,60114700,60114974,60115719,60115941,60118329,60121196,60124218,60125637,60133970	60092419,60108327,60114879,60115461,60115819,60116060,60118692,60121299,60125251,60125823,60134814	Gene ID= ENSG00000126773.12 TPM= 8.76 Transcript Type= protein_coding
chr14	60091911	60148221	60091911	60148221	+	ENST00000317623.8@PCNX4	ENST00000317623.8	protein_coding	60091911,60114700,60114974,60115719,60115941,60118329,60121196,60124218,60125637,60133970	60092419,60114879,60115461,60115819,60116060,60118692,60121299,60125251,60125823,60148221	Gene ID= ENSG00000126773.12 TPM= 7.59 Transcript Type= protein_coding
chr14	60091919	60111157	60091919	60111157	+	ENST00000391611.6@PCNX4	ENST00000391611.6	protein_coding	60091919,60107586	60092419,60111157	Gene ID= ENSG00000126773.12 TPM= 5.84 Transcript Type= protein_coding
chr14	60144120	60169856	60144120	60169856	-	ENST00000216500.9@DHRS7	ENST00000216500.9	protein_coding	60169697,60165177,60156000,60153959,60152939,60150065,60149353,60144120	60169856,60165605,60156152,60154065,60153178,60150187,60149568,60145013	Gene ID= ENSG00000100612.13 TPM= 151.79 Transcript Type= protein_coding
chr14	60144784	60165419	60144784	60165419	-	transcript2064.chr14.nic@DHRS7	transcript2064.chr14.nic	protein_coding	60165177,60156000,60153959,60150065,60149353,60144784	60165419,60156152,60154065,60150187,60149568,60145013	Gene ID= ENSG00000100612.13 TPM= 4.09 Transcript Type= NA
chr14	60144784	60165429	60144784	60165429	-	ENST00000557185.5@DHRS7	ENST00000557185.5	protein_coding	60165177,60156000,60153959,60152939,60150065,60149353,60144784	60165429,60156152,60154065,60153178,60150187,60149568,60145013	Gene ID= ENSG00000100612.13 TPM= 150.04 Transcript Type= protein_coding
chr14	60148948	60165293	60148948	60165293	-	ENST00000554101.5@DHRS7	ENST00000554101.5	protein_coding	60165177,60156000,60153959,60152939,60150065,60148948	60165293,60156152,60154065,60153178,60150187,60149568	Gene ID= ENSG00000100612.13 TPM= 1.17 Transcript Type= protein_coding
chr14	60249200	60293355	60249200	60293355	+	transcript2070.chr14.nic@PPM1A	transcript2070.chr14.nic	protein_coding	60249200,60277005,60282684,60285624,60289806,60291397,60292453	60249677,60277091,60283537,60285741,60289914,60291454,60293355	Gene ID= ENSG00000100614.17 TPM= 3.97 Transcript Type= NA
chr14	60249234	60293355	60249234	60293355	+	transcript2071.chr14.nnic@PPM1A	transcript2071.chr14.nnic	protein_coding	60249234,60268293,60282684,60285624,60289806,60291397,60292453	60249677,60268435,60283537,60285741,60289914,60291454,60293355	Gene ID= ENSG00000100614.17 TPM= 5.14 Transcript Type= NA
chr14	60249372	60293355	60249372	60293355	+	transcript2074.chr14.nic@PPM1A	transcript2074.chr14.nic	protein_coding	60249372,60250380,60282684,60285624,60289806,60291397,60292453	60249677,60250481,60283537,60285741,60289914,60291454,60293355	Gene ID= ENSG00000100614.17 TPM= 3.97 Transcript Type= NA
chr14	60249243	60293355	60249243	60293355	+	transcript2082.chr14.nnic@PPM1A	transcript2082.chr14.nnic	protein_coding	60249243,60285624,60289806,60291397,60292453	60249677,60285741,60289914,60291454,60293355	Gene ID= ENSG00000100614.17 TPM= 5.25 Transcript Type= NA
chr14	60249191	60288555	60249191	60288555	+	transcript2087.chr14.nic@PPM1A	transcript2087.chr14.nic	protein_coding	60249191,60282684,60285624	60249677,60283537,60288555	Gene ID= ENSG00000100614.17 TPM= 11.68 Transcript Type= NA
chr14	60249268	60299087	60249268	60299087	+	ENST00000395076.8@PPM1A	ENST00000395076.8	protein_coding	60249268,60282684,60285624,60289806,60291397,60292453	60249677,60283537,60285741,60289914,60291454,60299087	Gene ID= ENSG00000100614.17 TPM= 22.18 Transcript Type= protein_coding
chr14	60643415	60649462	60643415	60649462	-	ENST00000247182.6@SIX1	ENST00000247182.6	protein_coding	60648630,60643415	60649462,60646577	Gene ID= ENSG00000126778.8 TPM= 1.17 Transcript Type= protein_coding
chr14	60734734	60968680	60734734	60968680	+	transcript2094.chr14.nic@MNAT1	transcript2094.chr14.nic	protein_coding	60734734,60796217,60798087,60808325,60811987,60818722,60879714,60968559	60734951,60796369,60798160,60808428,60812127,60818847,60879835,60968680	Gene ID= ENSG00000020426.10 TPM= 3.5 Transcript Type= NA
chr14	60971451	60981088	60971451	60981088	-	transcript2116.chr14.nic@TRMT5	transcript2116.chr14.nic	protein_coding	60981024,60979231,60977514,60975475,60971451	60981088,60979886,60977638,60976126,60975194	Gene ID= ENSG00000126814.6 TPM= 4.67 Transcript Type= NA
chr14	60982206	61052445	60982206	61052445	+	transcript2107.chr14.nic@SLC38A6	transcript2107.chr14.nic	protein_coding	60982206,60982508,60984730,61015904,61019541,61030445,61037059,61037625,61043147,61043450,61045346,61046067,61050512,61051787,61052041,61052349	60982243,60982638,60984803,61015956,61019580,61030523,61037141,61037683,61043212,61043503,61045425,61046167,61050636,61051931,61052135,61052445	Gene ID= ENSG00000139974.15 TPM= 3.5 Transcript Type= NA
chr14	60981162	61052630	60981162	61052630	+	ENST00000267488.8@SLC38A6	ENST00000267488.8	protein_coding	60981162,60982508,60984730,61015904,61019541,61030445,61037059,61037625,61043147,61043450,61045346,61046067,61050512,61051787,61052041,61052349	60981382,60982638,60984803,61015956,61019580,61030523,61037141,61037683,61043212,61043503,61045425,61046167,61050636,61051931,61052135,61052630	Gene ID= ENSG00000139974.15 TPM= 7.01 Transcript Type= protein_coding
chr14	60987171	60989224	60987171	60989224	-	transcript2120.chr14.nnic@NA	transcript2120.chr14.nnic	NA	60987171	60989224	Gene ID= novel_gene_chr14_2121 TPM= 2.34 Transcript Type= NA
chr14	61321565	61488173	61321565	61488173	+	transcript2139.chr14.nic@PRKCH	transcript2139.chr14.nic	protein_coding	61321565,61391225,61443111,61445692,61449164,61450842,61453226,61457176,61457506,61485502	61322464,61391288,61443261,61445726,61449252,61450971,61453353,61457319,61457679,61488173	Gene ID= ENSG00000027075.14 TPM= 3.5 Transcript Type= NA
chr14	61321581	61446190	61321581	61446190	+	transcript2141.chr14.nic@PRKCH	transcript2141.chr14.nic	protein_coding	61321581,61391225,61443111,61445692	61322464,61391288,61443261,61446190	Gene ID= ENSG00000027075.14 TPM= 3.5 Transcript Type= NA
chr14	61321717	61550976	61321717	61550976	+	ENST00000332981.9@PRKCH	ENST00000332981.9	protein_coding	61321717,61391225,61443111,61445692,61449164,61450842,61453226,61457176,61457506,61485502,61529075,61530407,61547743,61549685	61322464,61391288,61443261,61445726,61449252,61450971,61453353,61457319,61457679,61485656,61529213,61530595,61547886,61550976	Gene ID= ENSG00000027075.14 TPM= 106.83 Transcript Type= protein_coding
chr14	61277983	61281812	61277983	61281812	-	transcript2144.chr14.nnic@NA	transcript2144.chr14.nnic	NA	61277983	61281812	Gene ID= novel_gene_chr14_2145 TPM= 189.15 Transcript Type= NA
chr14	61695488	61748258	61695488	61748258	+	transcript2156.chr14.nnic@HIF1A	transcript2156.chr14.nnic	protein_coding	61695488,61720382,61721509,61721739,61726706,61727453,61732418,61734138,61736889,61738087,61744705,61745691,61746934	61695839,61720572,61721654,61721823,61726818,61727655,61732524,61734285,61737109,61738373,61744813,61745817,61748258	Gene ID= ENSG00000100644.16 TPM= 3.89 Transcript Type= NA
chr14	61695540	61748258	61695540	61748258	+	ENST00000394997.5@HIF1A	ENST00000394997.5	protein_coding	61695540,61720379,61721509,61721739,61726706,61727453,61732418,61734138,61736889,61738087,61740505,61740755,61744705,61745691,61746934	61695839,61720572,61721654,61721823,61726818,61727655,61732524,61734285,61737109,61738373,61740627,61741188,61744813,61745817,61748258	Gene ID= ENSG00000100644.16 TPM= 6.22 Transcript Type= protein_coding
chr14	61695777	61748258	61695777	61748258	+	ENST00000323441.10@HIF1A	ENST00000323441.10	protein_coding	61695777,61720382,61721509,61721739,61726706,61727453,61732418,61734138,61736889,61738087,61740505,61740755,61744705,61746934	61695839,61720572,61721654,61721823,61726818,61727655,61732524,61734285,61737109,61738373,61740627,61741188,61744813,61748258	Gene ID= ENSG00000100644.16 TPM= 2.34 Transcript Type= protein_coding
chr14	61762357	61796428	61762357	61796428	+	ENST00000216294.4@SNAPC1	ENST00000216294.4	protein_coding	61762357,61766876,61767212,61768636,61776095,61778072,61778848,61782247,61792807,61794949	61762588,61767035,61767352,61768740,61776253,61778140,61778910,61782397,61792902,61796428	Gene ID= ENSG00000023608.4 TPM= 4.67 Transcript Type= protein_coding
chr14	63204408	63293219	63204408	63293219	+	ENST00000316754.7@RHOJ	ENST00000316754.7	protein_coding	63204408,63269110,63280971,63283121,63290878	63205047,63269168,63281135,63283216,63293219	Gene ID= ENSG00000126785.12 TPM= 12.84 Transcript Type= protein_coding
chr14	63374690	63543335	63374690	63543335	-	transcript2184.chr14.nic@PPP2R5E	transcript2184.chr14.nic	protein_coding	63542779,63539529,63421993,63415140,63396586,63395226,63393820,63391972,63391817,63389612,63384444,63382056,63374690	63543335,63539692,63422094,63415232,63396716,63395285,63393928,63392025,63391867,63389731,63384571,63382157,63376108	Gene ID= ENSG00000154001.13 TPM= 7.01 Transcript Type= NA
chr14	63597039	63642026	63597039	63642026	-	transcript2195.chr14.nnic@WDR89	transcript2195.chr14.nnic	protein_coding	63641804,63624928,63597039	63642026,63625033,63599973	Gene ID= ENSG00000140006.11 TPM= 12.84 Transcript Type= NA
chr14	63684214	63728055	63684214	63728055	-	transcript2199.chr14.nnic@SGPP1	transcript2199.chr14.nnic	protein_coding	63727261,63716349,63698569,63684214	63728055,63716466,63698658,63686656	Gene ID= ENSG00000126821.7 TPM= 7.01 Transcript Type= NA
chr14	63684217	63728055	63684217	63728055	-	transcript2201.chr14.nnic@SGPP1	transcript2201.chr14.nnic	protein_coding	63727261,63684217	63728055,63686656	Gene ID= ENSG00000126821.7 TPM= 5.84 Transcript Type= NA
chr14	63684214	63728039	63684214	63728039	-	ENST00000247225.6@SGPP1	ENST00000247225.6	protein_coding	63727261,63698569,63684214	63728039,63698658,63686656	Gene ID= ENSG00000126821.7 TPM= 85.23 Transcript Type= protein_coding
chr14	63852964	63963934	63852964	63963934	+	transcript2209.chr14.nic@SYNE2	transcript2209.chr14.nic	protein_coding	63852964,63909098,63940614,63941695,63941885,63942051,63949825,63954719,63961525,63963899	63853143,63909227,63940675,63941790,63941962,63942143,63950006,63954915,63961625,63963934	Gene ID= ENSG00000054654.16 TPM= 2.34 Transcript Type= NA
chr14	64197009	64226433	64197009	64226433	+	transcript2211.chr14.nnic@SYNE2	transcript2211.chr14.nnic	protein_coding	64197009,64202801,64208758,64209428,64209942,64211961,64212811,64214194,64215286,64216248,64218398,64219208,64220437,64221576,64223189,64224461,64224999,64225319	64197104,64202963,64208945,64209578,64210124,64212098,64213005,64214470,64215354,64216387,64218512,64219410,64220637,64221704,64223380,64224547,64225045,64226433	Gene ID= ENSG00000054654.16 TPM= 6.22 Transcript Type= NA
chr14	64209588	64226433	64209588	64226433	+	transcript2214.chr14.nic@SYNE2	transcript2214.chr14.nic	protein_coding	64209588,64211961,64212811,64214194,64215286,64216248,64218398,64219208,64220437,64221576,64223189,64224461,64224999,64225319	64210124,64212098,64213005,64214470,64215354,64216387,64218512,64219410,64220637,64221704,64223380,64224547,64225045,64226433	Gene ID= ENSG00000054654.16 TPM= 6.22 Transcript Type= NA
chr14	64209588	64226433	64209588	64226433	+	transcript2217.chr14.nic@SYNE2	transcript2217.chr14.nic	protein_coding	64209588,64211961,64212811,64214194,64216248,64218398,64219208,64220437,64221576,64223189,64224461,64224999,64225319	64210124,64212098,64213005,64214470,64216387,64218512,64219410,64220637,64221704,64223380,64224547,64225045,64226433	Gene ID= ENSG00000054654.16 TPM= 7.39 Transcript Type= NA
chr14	64388358	64439918	64388358	64439918	+	transcript2221.chr14.nic@MTHFD1	transcript2221.chr14.nic	protein_coding	64388358,64400793,64411090,64412472,64415358,64415639,64417888,64419814,64424804,64425730,64426019,64427337,64430184,64431532,64431787,64435569,64439096	64388468,64400877,64411149,64412525,64415494,64415739,64418024,64419925,64424931,64425827,64426192,64427473,64430230,64431639,64431861,64435671,64439918	Gene ID= ENSG00000100714.15 TPM= 2.34 Transcript Type= NA
chr14	64388350	64460004	64388350	64460004	+	ENST00000216605.12@MTHFD1	ENST00000216605.12	protein_coding	64388350,64400793,64411090,64412472,64415358,64415639,64417888,64419814,64424804,64425730,64426019,64427337,64430184,64431532,64431787,64435569,64439096,64440126,64441385,64442054,64442263,64444693,64448217,64449445,64453754,64454723,64458214,64459759	64388468,64400877,64411149,64412525,64415494,64415739,64418024,64419925,64424931,64425827,64426192,64427473,64430230,64431639,64431861,64435671,64439172,64440266,64441453,64442165,64442402,64444734,64448317,64449622,64453861,64454875,64458307,64460004	Gene ID= ENSG00000100714.15 TPM= 100.41 Transcript Type= protein_coding
chr14	64503925	64523953	64503925	64523953	+	transcript2226.chr14.nic@ZBTB1	transcript2226.chr14.nic	protein_coding	64503925,64504777,64511249,64516600,64521487	64504091,64504946,64511384,64516751,64523953	Gene ID= ENSG00000126804.13 TPM= 4.67 Transcript Type= NA
chr14	64504302	64523900	64504302	64523900	+	transcript2247.chr14.nic@ZBTB1	transcript2247.chr14.nic	protein_coding	64504302,64521487	64504946,64523900	Gene ID= ENSG00000126804.13 TPM= 4.9 Transcript Type= NA
chr14	64504719	64523953	64504719	64523953	+	transcript2248.chr14.nic@ZBTB1	transcript2248.chr14.nic	protein_coding	64504719,64521487	64504946,64523953	Gene ID= ENSG00000126804.13 TPM= 10.74 Transcript Type= NA
chr14	64504745	64524646	64504745	64524646	+	transcript2249.chr14.nic@ZBTB1	transcript2249.chr14.nic	protein_coding	64504745,64521487	64504946,64524646	Gene ID= ENSG00000126804.13 TPM= 9.57 Transcript Type= NA
chr14	64504647	64524948	64504647	64524948	+	transcript2250.chr14.nic@ZBTB1	transcript2250.chr14.nic	protein_coding	64504647,64521487	64504946,64524948	Gene ID= ENSG00000126804.13 TPM= 11.91 Transcript Type= NA
chr14	64504737	64525055	64504737	64525055	+	transcript2251.chr14.nic@ZBTB1	transcript2251.chr14.nic	protein_coding	64504737,64521487	64504946,64525055	Gene ID= ENSG00000126804.13 TPM= 2.57 Transcript Type= NA
chr14	64540468	64543234	64540468	64543234	+	ENST00000247207.6@HSPA2	ENST00000247207.6	protein_coding	64540468	64543234	Gene ID= ENSG00000126803.9 TPM= 95.74 Transcript Type= protein_coding
chr14	64704675	64744244	64704675	64744244	+	transcript2253.chr14.nnic@PLEKHG3	transcript2253.chr14.nnic	protein_coding	64704675,64727593,64728996,64730243,64730642,64730799,64731038,64731361,64731714,64732095,64732427,64732803,64736853,64737356,64738742,64741036,64742982	64704704,64727951,64729093,64730312,64730688,64730949,64731169,64731543,64731806,64732181,64732460,64732901,64736891,64737375,64738855,64742455,64744244	Gene ID= ENSG00000126822.16 TPM= 3.5 Transcript Type= NA
chr14	64748307	64795608	64748307	64795608	-	transcript2258.chr14.nic@SPTB	transcript2258.chr14.nic	protein_coding	64795337,64794467,64792997,64791719,64786404,64785749,64785537,64784247,64782290,64779725,64779157,64775125,64774397,64773220,64772580,64770885,64769590,64769034,64767663,64767303,64766726,64753537,64749981,64749654,64748307	64795608,64794617,64793867,64791856,64787160,64785951,64785627,64784393,64782553,64779931,64779246,64775403,64774527,64773424,64772954,64771129,64769728,64769118,64767859,64767352,64766801,64753793,64750154,64749696,64749473	Gene ID= ENSG00000070182.19 TPM= 2.34 Transcript Type= NA
chr14	64914361	64935368	64914361	64935368	+	ENST00000607599.5@CHURC1	ENST00000607599.5	protein_coding	64914361,64923991,64926007,64932138	64914534,64924126,64926080,64935368	Gene ID= ENSG00000258289.8 TPM= 37.36 Transcript Type= protein_coding
chr14	64914415	64932320	64914415	64932320	+	ENST00000548752.6@CHURC1	ENST00000548752.6	protein_coding	64914415,64923991,64932138	64914534,64924126,64932320	Gene ID= ENSG00000258289.8 TPM= 4.67 Transcript Type= protein_coding
chr14	64939158	64942813	64939158	64942813	-	ENST00000389614.5@GPX2	ENST00000389614.5	protein_coding	64942505,64939158	64942813,64939838	Gene ID= ENSG00000176153.11 TPM= 1.17 Transcript Type= protein_coding
chr14	64945816	64972414	64945816	64972414	-	ENST00000533601.6@RAB15	ENST00000533601.6	protein_coding	64971953,64952511,64951603,64951074,64950325,64948668,64945816	64972414,64952571,64951663,64951151,64950414,64948733,64948512	Gene ID= ENSG00000139998.14 TPM= 61.88 Transcript Type= protein_coding
chr14	65075124	65102544	65075124	65102544	-	ENST00000618858.4@MAX	ENST00000618858.4	protein_coding	65102304,65101546,65093708,65077913,65077328,65075124	65102544,65101572,65093815,65078036,65077428,65076663	Gene ID= ENSG00000125952.18 TPM= 2.34 Transcript Type= protein_coding
chr14	65075124	65102504	65075124	65102504	-	ENST00000358402.8@MAX	ENST00000358402.8	protein_coding	65102304,65093708,65077913,65075124	65102504,65093815,65078036,65076663	Gene ID= ENSG00000125952.18 TPM= 26.85 Transcript Type= protein_coding
chr14	65075127	65102519	65075127	65102519	-	ENST00000394606.6@MAX	ENST00000394606.6	protein_coding	65102304,65101546,65093708,65077913,65077344,65075127	65102519,65101572,65093815,65078036,65077428,65076663	Gene ID= ENSG00000125952.18 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr14	65075544	65102470	65075544	65102470	-	ENST00000358664.8@MAX	ENST00000358664.8	protein_coding	65102304,65101546,65093708,65077913,65075544	65102470,65101572,65093815,65078036,65076663	Gene ID= ENSG00000125952.18 TPM= 14.01 Transcript Type= protein_coding
chr14	65410592	65744121	65410592	65744121	+	ENST00000360689.9@FUT8	ENST00000360689.9	protein_coding	65410592,65455621,65561337,65615978,65616211,65629492,65669243,65721775,65724147,65733231,65742093	65411993,65455718,65561766,65616093,65616373,65629606,65669480,65722021,65724323,65733381,65744121	Gene ID= ENSG00000033170.16 TPM= 17.51 Transcript Type= protein_coding
chr14	65412754	65743142	65412754	65743142	+	transcript2300.chr14.nic@FUT8	transcript2300.chr14.nic	protein_coding	65412754,65455621,65561337,65615978,65616211,65629492,65669243,65721775,65724147,65733231,65742093	65413214,65455718,65561766,65616093,65616373,65629606,65669480,65722021,65724323,65733381,65743142	Gene ID= ENSG00000033170.16 TPM= 5.84 Transcript Type= NA
chr14	66507407	67181803	66507407	67181803	+	ENST00000478722.5@GPHN	ENST00000478722.5	protein_coding	66507407,66681107,66776464,66824474,66879939,66916003,66922666,66924194,66965191,67023633,67058649,67088983,67100856,67110140,67111861,67113018,67122256,67143362,67159415,67165162,67168933,67179578,67180804	66508591,66681185,66776521,66824566,66880033,66916069,66922938,66924292,66965325,67023675,67058786,67089075,67100911,67110259,67111919,67113171,67122377,67143449,67159488,67165226,67169036,67179674,67181803	Gene ID= ENSG00000171723.15 TPM= 21.02 Transcript Type= protein_coding
chr14	66508414	66692819	66508414	66692819	+	transcript2314.chr14.nnic@GPHN	transcript2314.chr14.nnic	protein_coding	66508414,66681107,66691207	66508591,66681185,66692819	Gene ID= ENSG00000171723.15 TPM= 2.34 Transcript Type= NA
chr14	67241109	67335819	67241109	67335819	+	ENST00000261681.8@MPP5	ENST00000261681.8	protein_coding	67241109,67269701,67279018,67292511,67301389,67301972,67302410,67303522,67312527,67316832,67317408,67320230,67321057,67323702,67332780	67241533,67269783,67279537,67292719,67301466,67302118,67302571,67303599,67312710,67316903,67317479,67320397,67321259,67323812,67335819	Gene ID= ENSG00000072415.8 TPM= 24.52 Transcript Type= protein_coding
chr14	67359997	67386516	67359997	67386516	+	ENST00000256383.8@EIF2S1	ENST00000256383.8	protein_coding	67359997,67364767,67374468,67376439,67380659,67381593,67382447,67383315	67360456,67365008,67374547,67376590,67380765,67381690,67382590,67386516	Gene ID= ENSG00000134001.12 TPM= 115.59 Transcript Type= protein_coding
chr14	67386983	67412200	67386983	67412200	-	ENST00000216446.8@PLEK2	ENST00000216446.8	protein_coding	67412018,67397662,67395402,67393150,67392662,67392326,67390663,67388224,67386983	67412200,67397826,67395583,67393241,67392849,67392427,67390746,67388302,67387456	Gene ID= ENSG00000100558.8 TPM= 2.34 Transcript Type= protein_coding
chr14	67591026	67600301	67591026	67600301	-	transcript2350.chr14.nic@PIGH	transcript2350.chr14.nic	protein_coding	67600024,67593743,67592635,67591026	67600301,67593952,67592718,67592436	Gene ID= ENSG00000100564.8 TPM= 2.34 Transcript Type= NA
chr14	67619798	67651720	67619798	67651720	+	ENST00000261783.3@ARG2	ENST00000261783.3	protein_coding	67619798,67620894,67642186,67645643,67646644,67646921,67648047,67650715	67620088,67620966,67642363,67645802,67646738,67647025,67648183,67651720	Gene ID= ENSG00000081181.7 TPM= 2.34 Transcript Type= protein_coding
chr14	67651149	67674630	67651149	67674630	-	transcript2364.chr14.nic@VTI1B	transcript2364.chr14.nic	protein_coding	67674375,67659731,67656416,67653437,67651149	67674630,67659922,67656589,67653498,67651481	Gene ID= ENSG00000100568.10 TPM= 8.17 Transcript Type= NA
chr14	67647075	67674831	67647075	67674831	-	ENST00000554659.5@VTI1B	ENST00000554659.5	protein_coding	67674375,67662477,67659731,67656416,67653437,67647075	67674831,67662535,67659922,67656589,67653498,67651481	Gene ID= ENSG00000100568.10 TPM= 24.52 Transcript Type= protein_coding
chr14	67674278	67676125	67674278	67676125	+	transcript2365.chr14.nnic@NA	transcript2365.chr14.nnic	NA	67674278	67676125	Gene ID= novel_gene_chr14_2366 TPM= 2.34 Transcript Type= NA
chr14	67676801	67695814	67676801	67695814	-	ENST00000381346.8@RDH11	ENST00000381346.8	protein_coding	67695630,67692934,67692438,67691140,67690212,67685015,67676801	67695814,67693052,67692593,67691244,67690421,67685204,67678423	Gene ID= ENSG00000072042.12 TPM= 5.84 Transcript Type= protein_coding
chr14	67677364	67695754	67677364	67695754	-	ENST00000553384.5@RDH11	ENST00000553384.5	protein_coding	67695630,67692973,67692438,67691140,67690212,67685015,67677364	67695754,67693052,67692593,67691244,67690421,67685204,67678423	Gene ID= ENSG00000072042.12 TPM= 7.01 Transcript Type= protein_coding
chr14	67693653	67695733	67693653	67695733	-	transcript2379.chr14.nnic@NA	transcript2379.chr14.nnic	NA	67693653	67695733	Gene ID= novel_gene_chr14_2380 TPM= 3.5 Transcript Type= NA
chr14	67748229	67766504	67748229	67766504	-	transcript2381.chr14.nic@ZFYVE26	transcript2381.chr14.nic	protein_coding	67766227,67762672,67762203,67761366,67755948,67755051,67754071,67753707,67752344,67751052,67748229	67766504,67762819,67762412,67761584,67756145,67755250,67754212,67753766,67752526,67751096,67748639	Gene ID= ENSG00000072121.15 TPM= 3.5 Transcript Type= NA
chr14	68291884	68497781	68291884	68497781	+	transcript2383.chr14.nic@RAD51B	transcript2383.chr14.nic	protein_coding	68291884,68411424,68468172,68497124	68291980,68411527,68468250,68497781	Gene ID= ENSG00000182185.18 TPM= 2.34 Transcript Type= NA
chr14	67819808	68595996	67819808	68595996	+	ENST00000487270.5@RAD51B	ENST00000487270.5	protein_coding	67819808,67823542,67825464,67835080,67865003,67885869,67887021,68291884,68411424,68468172,68594485	67819853,67823627,67825577,67835196,67865139,67885988,67887204,68291980,68411527,68468250,68595996	Gene ID= ENSG00000182185.18 TPM= 1.17 Transcript Type= protein_coding
chr14	68787662	68793066	68787662	68793066	-	transcript2391.chr14.nnic@ZFP36L1	transcript2391.chr14.nnic	protein_coding	68792882,68790333,68789527,68787662	68793066,68790492,68789668,68788809	Gene ID= ENSG00000185650.9 TPM= 12.84 Transcript Type= NA
chr14	68788605	68794736	68788605	68794736	-	ENST00000336440.3@ZFP36L1	ENST00000336440.3	protein_coding	68792882,68789527,68788605	68794736,68790492,68788809	Gene ID= ENSG00000185650.9 TPM= 10.51 Transcript Type= protein_coding
chr14	68794740	68796107	68794740	68796107	-	transcript2399.chr14.nnic@NA	transcript2399.chr14.nnic	NA	68794740	68796107	Gene ID= novel_gene_chr14_2400 TPM= 4.67 Transcript Type= NA
chr14	68874143	68979440	68874143	68979440	-	ENST00000193403.10@ACTN1	ENST00000193403.10	protein_coding	68978952,68925558,68921006,68912156,68909955,68909318,68904655,68902477,68893655,68892053,68890139,68885425,68884775,68884168,68882873,68882458,68880810,68879962,68878989,68877082,68874143	68979440,68925672,68921125,68912242,68910042,68909396,68904736,68902562,68893747,68892283,68890286,68885575,68884883,68884308,68883055,68882592,68880989,68880108,68879069,68877240,68875017	Gene ID= ENSG00000072110.13 TPM= 95.07 Transcript Type= protein_coding
chr14	68874686	68979262	68874686	68979262	-	ENST00000438964.6@ACTN1	ENST00000438964.6	protein_coding	68978952,68925558,68921006,68912156,68909955,68909318,68904655,68902477,68893655,68892053,68890139,68885425,68884775,68884168,68882873,68882458,68880810,68879962,68878458,68877082,68874686	68979262,68925672,68921125,68912242,68910042,68909396,68904736,68902562,68893747,68892283,68890286,68885575,68884883,68884308,68883055,68882592,68880989,68880108,68878523,68877240,68875017	Gene ID= ENSG00000072110.13 TPM= 18.97 Transcript Type= protein_coding
chr14	69051855	69153044	69051855	69153044	-	transcript2425.chr14.nic@DCAF5	transcript2425.chr14.nic	protein_coding	69152944,69122217,69119194,69118139,69116366,69091674,69075345,69062384,69051855	69153044,69122360,69119230,69118278,69116495,69091887,69075411,69062511,69055611	Gene ID= ENSG00000139990.17 TPM= 7.59 Transcript Type= NA
chr14	69051852	69153138	69051852	69153138	-	transcript2430.chr14.nic@DCAF5	transcript2430.chr14.nic	protein_coding	69152765,69122217,69119194,69118139,69116366,69091674,69075345,69051852	69153138,69122360,69119230,69118278,69116495,69091887,69075411,69055611	Gene ID= ENSG00000139990.17 TPM= 7.01 Transcript Type= NA
chr14	69051855	69153025	69051855	69153025	-	transcript2432.chr14.nic@DCAF5	transcript2432.chr14.nic	protein_coding	69152765,69122217,69118139,69116366,69091674,69075345,69062384,69051855	69153025,69122360,69119230,69116495,69091887,69075411,69062511,69055611	Gene ID= ENSG00000139990.17 TPM= 8.76 Transcript Type= NA
chr14	69053825	69153003	69053825	69153003	-	ENST00000557386.5@DCAF5	ENST00000557386.5	protein_coding	69152765,69122217,69119194,69118139,69116366,69091674,69075345,69062384,69053825	69153003,69122360,69119230,69118275,69116495,69091887,69075411,69062511,69055611	Gene ID= ENSG00000139990.17 TPM= 2.34 Transcript Type= protein_coding
chr14	69191487	69242356	69191487	69242356	+	transcript2439.chr14.nic@EXD2	transcript2439.chr14.nic	protein_coding	69191487,69203917,69209424,69228816,69230472,69234700,69236046,69236407,69237575,69240884	69191591,69204000,69209803,69229072,69230598,69235031,69236152,69236542,69237931,69242356	Gene ID= ENSG00000081177.18 TPM= 7.01 Transcript Type= NA
chr14	69191766	69244020	69191766	69244020	+	ENST00000312994.9@EXD2	ENST00000312994.9	protein_coding	69191766,69209424,69228816,69230472,69234700,69236046,69236407,69237575,69240884	69192039,69209803,69229072,69230598,69235031,69236152,69236542,69237931,69244020	Gene ID= ENSG00000081177.18 TPM= 3.5 Transcript Type= protein_coding
chr14	69191511	69242358	69191511	69242358	+	ENST00000409018.7@EXD2	ENST00000409018.7	protein_coding	69191511,69209424,69228816,69230472,69234700,69236046,69236407,69237575,69240884	69191591,69209803,69229072,69230598,69235031,69236152,69236542,69237931,69242358	Gene ID= ENSG00000081177.18 TPM= 7.01 Transcript Type= protein_coding
chr14	69191555	69242358	69191555	69242358	+	ENST00000409675.5@EXD2	ENST00000409675.5	protein_coding	69191555,69228816,69230472,69234700,69236046,69236407,69237575,69240884	69191591,69229072,69230598,69235031,69236152,69236542,69237931,69242358	Gene ID= ENSG00000081177.18 TPM= 2.34 Transcript Type= protein_coding
chr14	69259964	69357033	69259964	69357033	+	ENST00000337827.8@GALNT16	ENST00000337827.8	protein_coding	69259964,69320711,69324692,69325337,69325962,69328450,69331464,69333085,69333497,69338651,69339527,69341681,69347040,69347877,69352031,69353332	69260467,69320868,69324790,69325404,69326027,69328571,69331551,69333169,69333600,69338777,69339619,69341764,69347181,69348002,69352170,69357033	Gene ID= ENSG00000100626.16 TPM= 2.34 Transcript Type= protein_coding
chr14	69380123	69398334	69380123	69398334	-	transcript2452.chr14.nnic@ERH	transcript2452.chr14.nnic	protein_coding	69398231,69394825,69386963,69380577,69380123	69398334,69394912,69387083,69380640,69380482	Gene ID= ENSG00000100632.10 TPM= 5.84 Transcript Type= NA
chr14	69380123	69398627	69380123	69398627	-	ENST00000557016.5@ERH	ENST00000557016.5	protein_coding	69398231,69394825,69386963,69380123	69398627,69394912,69387083,69380640	Gene ID= ENSG00000100632.10 TPM= 26.85 Transcript Type= protein_coding
chr14	69383873	69385664	69383873	69385664	+	transcript2454.chr14.nnic@NA	transcript2454.chr14.nnic	NA	69383873	69385664	Gene ID= novel_gene_chr14_2455 TPM= 4.67 Transcript Type= NA
chr14	69398692	69462381	69398692	69462381	+	ENST00000031146.8@SLC39A9	ENST00000031146.8	protein_coding	69398692,69424094,69453241,69454812,69455732,69458363	69399465,69424202,69453309,69454897,69455866,69462381	Gene ID= ENSG00000029364.11 TPM= 38.53 Transcript Type= protein_coding
chr14	69611596	69715142	69611596	69715142	+	ENST00000342745.4@SUSD6	ENST00000342745.4	protein_coding	69611596,69658513,69703395,69704604,69708677,69710954	69611828,69658713,69703592,69704742,69709104,69715142	Gene ID= ENSG00000100647.7 TPM= 105.08 Transcript Type= protein_coding
chr14	69658249	69714150	69658249	69714150	+	transcript2465.chr14.nnic@SUSD6	transcript2465.chr14.nnic	protein_coding	69658249,69658513,69703395,69704604,69708677,69710954	69658287,69658713,69703592,69704742,69709104,69714150	Gene ID= ENSG00000100647.7 TPM= 2.34 Transcript Type= NA
chr14	69726900	69772004	69726900	69772004	+	ENST00000553521.5@SRSF5	ENST00000553521.5	protein_coding	69726900,69766114,69768138,69768604,69768798,69769182,69770467,69770995,69771194	69727191,69767255,69768282,69768674,69768896,69769251,69770540,69771105,69772004	Gene ID= ENSG00000100650.15 TPM= 124.93 Transcript Type= protein_coding
chr14	69767093	69771973	69767093	69771973	+	ENST00000394366.6@SRSF5	ENST00000394366.6	protein_coding	69767093,69768138,69768604,69768798,69769182,69770467,69770995,69771194	69767380,69768282,69768674,69768896,69769251,69770540,69771105,69771973	Gene ID= ENSG00000100650.15 TPM= 5.84 Transcript Type= protein_coding
chr14	69767076	69772004	69767076	69772004	+	transcript2473.chr14.nic@SRSF5	transcript2473.chr14.nic	protein_coding	69767076,69768138,69768604,69768798,69769182,69770995,69771194	69767255,69768282,69768674,69768896,69770540,69771105,69772004	Gene ID= ENSG00000100650.15 TPM= 33.28 Transcript Type= NA
chr14	69767093	69772004	69767093	69772004	+	ENST00000554465.5@SRSF5	ENST00000554465.5	protein_coding	69767093,69768138,69768604,69768798,69770995,69771194	69767255,69768282,69768674,69770540,69771105,69772004	Gene ID= ENSG00000100650.15 TPM= 11.68 Transcript Type= retained_intron
chr14	69767172	69771642	69767172	69771642	+	ENST00000556184.5@SRSF5	ENST00000556184.5	protein_coding	69767172,69768138,69768604,69768798,69769182,69770995,69771194	69767380,69768282,69768674,69768896,69770540,69771105,69771642	Gene ID= ENSG00000100650.15 TPM= 1.17 Transcript Type= retained_intron
chr14	69774013	69775274	69774013	69775274	-	transcript2487.chr14.nnic@NA	transcript2487.chr14.nnic	NA	69774013	69775274	Gene ID= novel_gene_chr14_2488 TPM= 8.17 Transcript Type= NA
chr14	70325081	70359731	70325081	70359731	-	ENST00000389912.6@COX16	ENST00000389912.6	protein_coding	70359519,70342658,70329174,70325081	70359731,70342729,70329236,70326449	Gene ID= ENSG00000133983.14 TPM= 5.84 Transcript Type= protein_coding
chr14	70326068	70359700	70326068	70359700	-	ENST00000557612.5@COX16	ENST00000557612.5	protein_coding	70359519,70329174,70326068	70359700,70329236,70326449	Gene ID= ENSG00000133983.14 TPM= 4.67 Transcript Type= processed_transcript
chr14	70366505	70417073	70366505	70417073	-	transcript2497.chr14.nnic@SYNJ2BP-COX16	transcript2497.chr14.nnic	protein_coding	70416900,70388470,70375676,70371774,70366505	70417073,70388606,70375771,70373131,70367328	Gene ID= ENSG00000258644.5 TPM= 2.34 Transcript Type= NA
chr14	70366496	70417045	70366496	70417045	-	ENST00000256366.5@SYNJ2BP	ENST00000256366.5	protein_coding	70416900,70388470,70375676,70366496	70417045,70388606,70375771,70373131	Gene ID= ENSG00000213463.4 TPM= 19.85 Transcript Type= protein_coding
chr14	70581251	70583834	70581251	70583834	-	transcript2514.chr14.nnic@NA	transcript2514.chr14.nnic	NA	70581251	70583834	Gene ID= novel_gene_chr14_2515 TPM= 2.34 Transcript Type= NA
chr14	70798472	70809404	70798472	70809404	-	transcript2521.chr14.nic@MAP3K9	transcript2521.chr14.nic	protein_coding	70808766,70798472	70809404,70801080	Gene ID= ENSG00000006432.15 TPM= 2.34 Transcript Type= NA
chr14	70907556	70973275	70907556	70973275	+	transcript2530.chr14.nnic@PCNX1	transcript2530.chr14.nnic	protein_coding	70907556,70946915,70962226,70968198,70969021,70971422	70908003,70947123,70962331,70968243,70969701,70973275	Gene ID= ENSG00000100731.15 TPM= 2.34 Transcript Type= NA
chr14	72352093	72566529	72352093	72566529	+	ENST00000622468.4@RGS6	ENST00000622468.4	protein_coding	72352093,72454528,72458271,72459632,72465758,72470007,72472872,72474625,72476742,72478268,72495152,72510154,72518351,72536186,72540041,72562417	72352194,72454578,72458377,72459683,72465822,72470083,72472953,72474699,72476840,72478329,72495262,72510279,72518537,72536275,72540094,72566529	Gene ID= ENSG00000182732.16 TPM= 1.17 Transcript Type= protein_coding
chr14	72612493	72614787	72612493	72614787	+	transcript2541.chr14.nnic@NA	transcript2541.chr14.nnic	NA	72612493	72614787	Gene ID= novel_gene_chr14_2542 TPM= 2.34 Transcript Type= NA
chr14	72926444	72959644	72926444	72959644	+	transcript2544.chr14.nic@DCAF4	transcript2544.chr14.nic	protein_coding	72926444,72937971,72939802,72940220,72941745,72942994,72945884,72947142,72951798,72954161,72954386,72955523,72956386,72958612	72926543,72938070,72939902,72940377,72941824,72943096,72946027,72947191,72951877,72954262,72954483,72955696,72956500,72959644	Gene ID= ENSG00000119599.16 TPM= 9.34 Transcript Type= NA
chr14	72926487	72959644	72926487	72959644	+	ENST00000555042.5@DCAF4	ENST00000555042.5	protein_coding	72926487,72937971,72939802,72940220,72941745,72942994,72945884,72947142,72951798,72954161,72954386,72955523,72956386,72958612	72926543,72938070,72939902,72940377,72941824,72943096,72946027,72947191,72951877,72954262,72954462,72955696,72956500,72959644	Gene ID= ENSG00000119599.16 TPM= 10.51 Transcript Type= protein_coding
chr14	72969452	73027212	72969452	73027212	-	ENST00000556143.5@ZFYVE1	ENST00000556143.5	protein_coding	73026926,73024026,72997811,72993143,72981789,72978861,72978137,72977927,72975551,72974779,72974080,72969452	73027212,73024942,72998315,72993357,72981895,72978969,72978234,72978044,72975721,72974959,72974193,72971114	Gene ID= ENSG00000165861.13 TPM= 31.53 Transcript Type= protein_coding
chr14	73058535	73120129	73058535	73120129	+	transcript2555.chr14.nic@RBM25	transcript2555.chr14.nic	protein_coding	73058535,73064972,73071627,73076319,73077369,73083494,73088001,73096915,73099380,73099667,73103192,73105859,73106196,73107826,73109342,73110831,73111528,73112152,73114286,73119713	73058705,73065093,73071747,73076368,73077536,73083551,73088161,73097100,73099433,73099750,73103478,73106081,73106285,73107899,73109492,73111155,73111802,73112250,73114333,73120129	Gene ID= ENSG00000119707.13 TPM= 2.92 Transcript Type= NA
chr14	73058436	73123898	73058436	73123898	+	ENST00000261973.11@RBM25	ENST00000261973.11	protein_coding	73058436,73071627,73076319,73077369,73083494,73088001,73096915,73099380,73099667,73103192,73105859,73106196,73107826,73109342,73110831,73111528,73112152,73114286,73119713	73058705,73071747,73076368,73077536,73083551,73088161,73097100,73099433,73099750,73103478,73106081,73106285,73107899,73109492,73111155,73111802,73112250,73114333,73123898	Gene ID= ENSG00000119707.13 TPM= 5.84 Transcript Type= protein_coding
chr14	73058508	73103197	73058508	73103197	+	transcript2565.chr14.nic@RBM25	transcript2565.chr14.nic	protein_coding	73058508,73071627,73076319,73077369,73083494,73088001,73096915,73099380,73099667,73100301	73058705,73071747,73076368,73077536,73083551,73088161,73097100,73099433,73099750,73103197	Gene ID= ENSG00000119707.13 TPM= 2.92 Transcript Type= NA
chr14	73136447	73223691	73136447	73223691	+	ENST00000324501.9@PSEN1	ENST00000324501.9	protein_coding	73136447,73147795,73147967,73170797,73173566,73186853,73192644,73198031,73206386,73211769,73217126,73219134	73136583,73147876,73148106,73171047,73173707,73186920,73192864,73198129,73206472,73211942,73217244,73223691	Gene ID= ENSG00000080815.18 TPM= 29.19 Transcript Type= protein_coding
chr14	73136447	73220401	73136447	73220401	+	ENST00000357710.8@PSEN1	ENST00000357710.8	protein_coding	73136447,73147795,73147967,73170797,73173566,73186853,73192644,73198031,73206386,73211769,73217126,73219134	73136583,73147876,73148094,73171047,73173707,73186920,73192864,73198129,73206472,73211942,73217244,73220401	Gene ID= ENSG00000080815.18 TPM= 141.28 Transcript Type= protein_coding
chr14	73237499	73274623	73237499	73274623	+	transcript2581.chr14.nic@PAPLN	transcript2581.chr14.nic	protein_coding	73237499,73239773,73244644,73245636,73246073,73249984,73250907,73251486,73251664,73252018,73252649,73253754,73254513,73254877,73258979,73259269,73260709,73261156,73262350,73263645,73264211,73264588,73265370,73266501,73266723,73268557,73272495	73237592,73239832,73244759,73245696,73246175,73250114,73251030,73251566,73251836,73252141,73252775,73253961,73254695,73255018,73259059,73259545,73260829,73261294,73262827,73263782,73264335,73264726,73265507,73266628,73266831,73268723,73274623	Gene ID= ENSG00000100767.15 TPM= 30.36 Transcript Type= NA
chr14	73275216	73458584	73275216	73458584	-	transcript2605.chr14.nic@NUMB	transcript2605.chr14.nic	protein_coding	73458493,73409937,73355626,73323130,73316390,73297211,73292734,73287110,73284081,73282359,73275216	73458584,73410068,73355766,73323204,73316422,73297285,73292874,73287314,73284374,73282505,73277293	Gene ID= ENSG00000133961.19 TPM= 11.3 Transcript Type= NA
chr14	73275216	73458290	73275216	73458290	-	transcript2607.chr14.nic@NUMB	transcript2607.chr14.nic	protein_coding	73458168,73409937,73366897,73355626,73323130,73297211,73292734,73287110,73284081,73282359,73275216	73458290,73410068,73366981,73355766,73323204,73297285,73292874,73287314,73284374,73282505,73277293	Gene ID= ENSG00000133961.19 TPM= 7.8 Transcript Type= NA
chr14	73275216	73458290	73275216	73458290	-	transcript2618.chr14.nic@NUMB	transcript2618.chr14.nic	protein_coding	73458168,73409937,73355626,73323130,73297211,73292734,73287110,73284081,73282359,73275216	73458290,73410068,73355766,73323204,73297285,73292874,73287314,73284374,73282505,73277293	Gene ID= ENSG00000133961.19 TPM= 7.8 Transcript Type= NA
chr14	73275216	73458588	73275216	73458588	-	transcript2619.chr14.nic@NUMB	transcript2619.chr14.nic	protein_coding	73458493,73409937,73355626,73323130,73297211,73292734,73287110,73284081,73282359,73275216	73458588,73410068,73355766,73323204,73297285,73292874,73287314,73284374,73282505,73277293	Gene ID= ENSG00000133961.19 TPM= 18.31 Transcript Type= NA
chr14	73275216	73458522	73275216	73458522	-	ENST00000557597.5@NUMB	ENST00000557597.5	protein_coding	73458493,73409937,73366897,73355626,73323130,73297211,73292734,73287110,73284081,73282359,73279281,73275216	73458522,73410068,73366981,73355766,73323204,73297285,73292874,73287314,73284374,73282505,73279424,73277293	Gene ID= ENSG00000133961.19 TPM= 4.19 Transcript Type= protein_coding
chr14	73275216	73458530	73275216	73458530	-	ENST00000555238.5@NUMB	ENST00000555238.5	protein_coding	73458493,73409937,73366897,73355626,73323130,73316390,73297211,73292734,73287110,73284081,73282359,73279281,73275216	73458530,73410068,73366981,73355766,73323204,73316422,73297285,73292874,73287314,73284374,73282505,73279424,73277293	Gene ID= ENSG00000133961.19 TPM= 3.02 Transcript Type= protein_coding
chr14	73275673	73458580	73275673	73458580	-	ENST00000555394.5@NUMB	ENST00000555394.5	protein_coding	73458493,73409937,73366897,73355626,73323130,73316390,73297211,73292734,73287110,73284081,73282359,73275673	73458580,73410068,73366981,73355766,73323204,73316422,73297285,73292874,73287314,73284374,73282505,73277293	Gene ID= ENSG00000133961.19 TPM= 4.78 Transcript Type= protein_coding
chr14	73286193	73458546	73286193	73458546	-	ENST00000554315.5@NUMB	ENST00000554315.5	protein_coding	73458493,73409937,73355626,73323130,73297211,73292734,73286193	73458546,73410068,73355766,73323204,73297285,73292874,73287314	Gene ID= ENSG00000133961.19 TPM= 2.34 Transcript Type= retained_intron
chr14	73310208	73313683	73310208	73313683	+	transcript2644.chr14.nnic@NA	transcript2644.chr14.nnic	NA	73310208	73313683	Gene ID= novel_gene_chr14_2645 TPM= 2.34 Transcript Type= NA
chr14	73354373	73354836	73354373	73354836	+	transcript2646.chr14.nnic@NA	transcript2646.chr14.nnic	NA	73354373	73354836	Gene ID= novel_gene_chr14_2647 TPM= 2.34 Transcript Type= NA
chr14	73490964	73493392	73490964	73493392	+	ENST00000304061.7@RIOX1	ENST00000304061.7	protein_coding	73490964	73493392	Gene ID= ENSG00000170468.7 TPM= 32.69 Transcript Type= protein_coding
chr14	73537114	73543794	73537114	73543794	+	ENST00000311148.8@ACOT1	ENST00000311148.8	protein_coding	73537114,73541493,73543050	73537878,73541695,73543794	Gene ID= ENSG00000184227.7 TPM= 81.73 Transcript Type= protein_coding
chr14	73569086	73575653	73569086	73575653	+	transcript2656.chr14.nic@ACOT2	transcript2656.chr14.nic	protein_coding	73569086,73573388,73574908	73569396,73573590,73575653	Gene ID= ENSG00000119673.14 TPM= 7.01 Transcript Type= NA
chr14	73569285	73575658	73569285	73575658	+	ENST00000613168.1@ACOT2	ENST00000613168.1	protein_coding	73569285,73573388,73574908	73569883,73573590,73575658	Gene ID= ENSG00000119673.14 TPM= 65.39 Transcript Type= protein_coding
chr14	73568247	73570048	73568247	73570048	-	transcript2657.chr14.nnic@NA	transcript2657.chr14.nnic	NA	73568247	73570048	Gene ID= novel_gene_chr14_2658 TPM= 9.34 Transcript Type= NA
chr14	73591706	73596496	73591706	73596496	+	ENST00000326303.4@ACOT4	ENST00000326303.4	protein_coding	73591706,73593702,73595049	73592416,73593904,73596496	Gene ID= ENSG00000177465.4 TPM= 9.34 Transcript Type= protein_coding
chr14	73592109	73595766	73592109	73595766	+	transcript2662.chr14.nnic@ACOT4	transcript2662.chr14.nnic	protein_coding	73592109,73593702,73595049	73592416,73594038,73595766	Gene ID= ENSG00000177465.4 TPM= 4.67 Transcript Type= NA
chr14	73644999	73703732	73644999	73703732	+	ENST00000553645.6@DNAL1	ENST00000553645.6	protein_coding	73644999,73654847,73658847,73661987,73671542,73687259,73689375,73695902	73645042,73654885,73658956,73662042,73671597,73687385,73689515,73703732	Gene ID= ENSG00000119661.14 TPM= 1.17 Transcript Type= protein_coding
chr14	73711783	73714372	73711783	73714372	-	ENST00000316836.4@PNMA1	ENST00000316836.4	protein_coding	73711783	73714372	Gene ID= ENSG00000176903.4 TPM= 64.22 Transcript Type= protein_coding
chr14	73723485	73728275	73723485	73728275	-	transcript2675.chr14.nic@ELMSAN1	transcript2675.chr14.nic	protein_coding	73726830,73726604,73723485	73728275,73726707,73726108	Gene ID= ENSG00000156030.13 TPM= 5.84 Transcript Type= NA
chr14	73751434	73757292	73751434	73757292	+	transcript2681.chr14.nnic@NA	transcript2681.chr14.nnic	NA	73751434	73757292	Gene ID= novel_gene_chr14_2682 TPM= 33.86 Transcript Type= NA
chr14	73851947	73885459	73851947	73885459	+	ENST00000267568.8@PTGR2	ENST00000267568.8	protein_coding	73851947,73858816,73860539,73874023,73876998,73879096,73880055,73881205,73882399,73884101	73852120,73858899,73860657,73874214,73877168,73879305,73880176,73881292,73882438,73885459	Gene ID= ENSG00000140043.11 TPM= 2.34 Transcript Type= protein_coding
chr14	73851844	73885456	73851844	73885456	+	ENST00000555228.5@PTGR2	ENST00000555228.5	protein_coding	73851844,73858816,73860539,73874023,73876998,73879096,73880055,73881205,73882399,73884101	73852004,73858899,73860657,73874214,73877168,73879305,73880176,73881292,73882438,73885456	Gene ID= ENSG00000140043.11 TPM= 5.84 Transcript Type= protein_coding
chr14	73876485	73880124	73876485	73880124	-	transcript2711.chr14.nnic@NA	transcript2711.chr14.nnic	NA	73876485	73880124	Gene ID= novel_gene_chr14_2712 TPM= 4.67 Transcript Type= NA
chr14	73886840	73932278	73886840	73932278	+	transcript2685.chr14.nnic@ZNF410	transcript2685.chr14.nnic	protein_coding	73886840,73888273,73892027,73893797,73896316,73898071,73903960,73904902,73909341,73920980,73922066,73923395,73931503	73886915,73888364,73892208,73893932,73896534,73898262,73904110,73905083,73909430,73921105,73922206,73923522,73932278	Gene ID= ENSG00000119725.18 TPM= 5.25 Transcript Type= NA
chr14	73886856	73932278	73886856	73932278	+	transcript2699.chr14.nic@ZNF410	transcript2699.chr14.nic	protein_coding	73886856,73892027,73893797,73896348,73898071,73903960,73904902,73909341,73920980,73923395,73931503	73886915,73892208,73893932,73896534,73898262,73904110,73905083,73909430,73921105,73923522,73932278	Gene ID= ENSG00000119725.18 TPM= 3.5 Transcript Type= NA
chr14	73886805	73932278	73886805	73932278	+	ENST00000324593.10@ZNF410	ENST00000324593.10	protein_coding	73886805,73892027,73893797,73896316,73898071,73903960,73904902,73909341,73920980,73923395,73931503	73886915,73892208,73893932,73896534,73898262,73904110,73905083,73909430,73921105,73923522,73932278	Gene ID= ENSG00000119725.18 TPM= 19.85 Transcript Type= protein_coding
chr14	73932510	73950414	73932510	73950414	-	ENST00000286544.3@FAM161B	ENST00000286544.3	protein_coding	73949973,73946286,73944335,73942369,73940926,73937948,73937602,73935949,73932510	73950414,73946605,73944885,73942715,73941053,73938112,73937701,73936088,73934394	Gene ID= ENSG00000156050.8 TPM= 2.34 Transcript Type= protein_coding
chr14	73950287	73963111	73950287	73963111	+	transcript2735.chr14.nic@COQ6	transcript2735.chr14.nic	protein_coding	73950287,73953435,73955451,73955805,73958147,73959162,73959415,73961173,73961455,73961737,73962970	73950495,73953569,73955509,73955928,73959078,73959224,73959522,73961375,73961570,73961903,73963111	Gene ID= ENSG00000119723.16 TPM= 9.92 Transcript Type= NA
chr14	73950252	73963108	73950252	73963108	+	ENST00000629426.2@COQ6	ENST00000629426.2	protein_coding	73950252,73953435,73955805,73958147,73958971,73959162,73959415,73961173,73961455,73961737,73962970	73950495,73953569,73955928,73958277,73959078,73959224,73959522,73961375,73961570,73961903,73963108	Gene ID= ENSG00000119723.16 TPM= 2.92 Transcript Type= protein_coding
chr14	73962693	74019332	73962693	74019332	-	ENST00000334696.10@ENTPD5	ENST00000334696.10	protein_coding	74019250,74015824,74011091,73987886,73986814,73983018,73977299,73977024,73976324,73975936,73974924,73973877,73972884,73971852,73970010,73962693	74019332,74015930,74011150,73988172,73986893,73983161,73977374,73977059,73976412,73976015,73974985,73973978,73973024,73971908,73970125,73967014	Gene ID= ENSG00000187097.12 TPM= 4.67 Transcript Type= protein_coding
chr14	74019356	74066092	74019356	74066092	+	ENST00000394009.4@BBOF1	ENST00000394009.4	protein_coding	74019356,74022916,74029184,74034028,74040565,74046060,74047930,74049702,74055584,74056906,74057144,74064688	74019534,74023144,74029249,74034171,74040645,74046130,74048074,74050195,74055685,74056980,74057258,74066092	Gene ID= ENSG00000119636.15 TPM= 1.17 Transcript Type= protein_coding
chr14	74056850	74084493	74056850	74084493	-	ENST00000553458.5@ALDH6A1	ENST00000553458.5	protein_coding	74084347,74074955,74072537,74072203,74071896,74071195,74068860,74067380,74066705,74065181,74064822,74056850	74084493,74075017,74072611,74072364,74071974,74071497,74068981,74067569,74066886,74065360,74064920,74060746	Gene ID= ENSG00000119711.12 TPM= 23.35 Transcript Type= protein_coding
chr14	74084955	74201233	74084955	74201233	+	transcript2746.chr14.nnic@LIN52	transcript2746.chr14.nnic	protein_coding	74084955,74091232,74095948,74097794,74101155,74198922,74200201	74084993,74091306,74095985,74097860,74101238,74200065,74201233	Gene ID= ENSG00000205659.10 TPM= 9.92 Transcript Type= NA
chr14	74084796	74201235	74084796	74201235	+	ENST00000555028.5@LIN52	ENST00000555028.5	protein_coding	74084796,74091232,74095948,74097794,74101155,74198922	74084993,74091306,74095985,74097860,74101238,74201235	Gene ID= ENSG00000205659.10 TPM= 9.92 Transcript Type= protein_coding
chr14	74084965	74086655	74084965	74086655	+	transcript2756.chr14.nnic@NA	transcript2756.chr14.nnic	NA	74084965	74086655	Gene ID= novel_gene_chr14_2757 TPM= 2.34 Transcript Type= NA
chr14	74285423	74303056	74285423	74303056	-	ENST00000356924.8@ABCD4	ENST00000356924.8	protein_coding	74302875,74300150,74299548,74297930,74296333,74295854,74295148,74293154,74292748,74292551,74292287,74290291,74290027,74289483,74288716,74288207,74287810,74286701,74285423	74303056,74300268,74299675,74298069,74296449,74295979,74295198,74293248,74292869,74292642,74292376,74290499,74290118,74289519,74288765,74288259,74287886,74286816,74286529	Gene ID= ENSG00000119688.20 TPM= 23.35 Transcript Type= protein_coding
chr14	74285996	74303036	74285996	74303036	-	transcript2759.chr14.nic@ABCD4	transcript2759.chr14.nic	protein_coding	74302875,74299548,74297930,74296333,74295854,74295148,74293154,74292748,74292551,74292287,74290291,74290027,74289483,74288716,74288207,74287810,74286701,74285996	74303036,74299675,74298069,74296449,74295979,74295198,74293248,74292869,74292642,74292376,74290499,74290118,74289519,74288765,74288259,74287886,74286816,74286529	Gene ID= ENSG00000119688.20 TPM= 5.84 Transcript Type= NA
chr14	74285996	74303009	74285996	74303009	-	transcript2761.chr14.nic@ABCD4	transcript2761.chr14.nic	protein_coding	74302875,74300150,74299548,74297930,74296333,74295148,74293154,74292748,74292551,74292287,74290291,74290027,74289483,74288716,74288207,74287810,74286701,74285996	74303009,74300268,74299675,74298069,74296449,74295198,74293248,74292869,74292642,74292376,74290499,74290118,74289519,74288765,74288259,74287886,74286816,74286529	Gene ID= ENSG00000119688.20 TPM= 3.5 Transcript Type= NA
chr14	74286014	74303009	74286014	74303009	-	transcript2766.chr14.nic@ABCD4	transcript2766.chr14.nic	protein_coding	74302875,74300150,74299548,74297930,74296333,74295854,74295148,74293154,74292748,74292551,74292287,74290291,74290027,74289483,74288716,74288207,74287810,74286014	74303009,74300268,74299675,74298069,74296449,74295979,74295198,74293248,74292869,74292642,74292376,74290499,74290118,74289519,74288765,74288259,74287886,74286816	Gene ID= ENSG00000119688.20 TPM= 7.01 Transcript Type= NA
chr14	74285996	74302983	74285996	74302983	-	transcript2767.chr14.nnic@ABCD4	transcript2767.chr14.nnic	protein_coding	74302875,74297930,74296333,74295854,74295148,74293154,74292748,74292551,74292287,74290291,74290027,74289483,74288716,74288207,74287810,74286701,74285996	74302983,74298069,74296449,74295979,74295198,74293248,74292869,74292642,74292376,74290499,74290118,74289519,74288765,74288259,74287886,74286816,74286529	Gene ID= ENSG00000119688.20 TPM= 2.34 Transcript Type= NA
chr14	74285996	74302973	74285996	74302973	-	transcript2768.chr14.nic@ABCD4	transcript2768.chr14.nic	protein_coding	74302875,74299548,74296333,74295854,74295148,74293154,74292748,74292551,74292287,74290291,74290027,74289483,74288716,74288207,74287810,74286701,74285996	74302973,74299675,74296449,74295979,74295198,74293248,74292869,74292642,74292376,74290499,74290118,74289519,74288765,74288259,74287886,74286816,74286529	Gene ID= ENSG00000119688.20 TPM= 2.34 Transcript Type= NA
chr14	74286014	74302937	74286014	74302937	-	ENST00000481935.5@ABCD4	ENST00000481935.5	protein_coding	74302875,74300150,74297930,74296333,74295854,74295148,74293154,74292748,74292551,74292287,74290291,74290027,74289483,74288716,74288207,74287810,74286014	74302937,74300268,74298069,74296449,74295979,74295198,74293248,74292869,74292642,74292376,74290499,74290118,74289519,74288765,74288259,74287886,74286816	Gene ID= ENSG00000119688.20 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr14	74479933	74493512	74479933	74493512	-	ENST00000555619.5@NPC2	ENST00000555619.5	protein_coding	74493193,74486329,74484415,74480702,74479933	74493512,74486436,74484587,74480779,74480288	Gene ID= ENSG00000119655.10 TPM= 600.73 Transcript Type= protein_coding
chr14	74480082	74493339	74480082	74493339	-	ENST00000553490.5@NPC2	ENST00000553490.5	protein_coding	74493193,74486329,74484415,74480686,74480082	74493339,74486436,74484587,74480779,74480288	Gene ID= ENSG00000119655.10 TPM= 68.89 Transcript Type= protein_coding
chr14	74493720	74497106	74493720	74497106	+	ENST00000556816.5@ISCA2	ENST00000556816.5	protein_coding	74493720,74494050,74494275,74494826	74493845,74494152,74494390,74497106	Gene ID= ENSG00000165898.13 TPM= 38.53 Transcript Type= protein_coding
chr14	74493756	74495366	74493756	74495366	+	ENST00000298818.12@ISCA2	ENST00000298818.12	protein_coding	74493756,74494050,74494275,74494839	74493845,74494152,74494404,74495366	Gene ID= ENSG00000165898.13 TPM= 39.7 Transcript Type= protein_coding
chr14	74498170	74612331	74498170	74612331	-	ENST00000261978.8@LTBP2	ENST00000261978.8	protein_coding	74611451,74603635,74585854,74555503,74552892,74552187,74551064,74549863,74535926,74532426,74528958,74528483,74527347,74526075,74525124,74522790,74521911,74516822,74511245,74510091,74509734,74509238,74508830,74508604,74507973,74507179,74506698,74506048,74504983,74504778,74503926,74503469,74503219,74502653,74501441,74498170	74612331,74603705,74586118,74555693,74553062,74552393,74551350,74549965,74536000,74532548,74529122,74528698,74527366,74526114,74525225,74522918,74522039,74516941,74511364,74510213,74509859,74509363,74508952,74508729,74508095,74507310,74506823,74506191,74505174,74504861,74504054,74503606,74503386,74502934,74501590,74501029	Gene ID= ENSG00000119681.11 TPM= 141.28 Transcript Type= protein_coding
chr14	74661252	74713115	74661252	74713115	-	ENST00000356357.8@AREL1	ENST00000356357.8	protein_coding	74712933,74692041,74685600,74684454,74683296,74676583,74676141,74675699,74674034,74673077,74672831,74671408,74670762,74669947,74669649,74667465,74667319,74664836,74663899,74661252	74713115,74692328,74685660,74684680,74683533,74676752,74676321,74675946,74674111,74673218,74672952,74671483,74670871,74670126,74669774,74667594,74667377,74664925,74664074,74663822	Gene ID= ENSG00000119682.16 TPM= 28.02 Transcript Type= protein_coding
chr14	74713144	74736708	74713144	74736708	+	transcript2818.chr14.nnic@FCF1	transcript2818.chr14.nnic	protein_coding	74713144,74713485,74714872,74715951,74723272,74732731,74734076,74734882,74736375	74713200,74713552,74714943,74716099,74723344,74732818,74734170,74735605,74736708	Gene ID= ENSG00000119616.11 TPM= 3.5 Transcript Type= NA
chr14	74713144	74738620	74713144	74738620	+	ENST00000341162.8@FCF1	ENST00000341162.8	protein_coding	74713144,74713485,74714872,74715951,74723272,74732731,74734076,74734882	74713200,74713552,74714943,74716099,74723344,74732818,74734170,74738620	Gene ID= ENSG00000119616.11 TPM= 1.17 Transcript Type= protein_coding
chr14	74713157	74714791	74713157	74714791	+	transcript2824.chr14.nnic@NA	transcript2824.chr14.nnic	NA	74713157	74714791	Gene ID= novel_gene_chr14_2825 TPM= 2.34 Transcript Type= NA
chr14	74763366	74836281	74763366	74836281	+	ENST00000325680.11@YLPM1	ENST00000325680.11	protein_coding	74763366,74778447,74780405,74781334,74797580,74802556,74809380,74809910,74810225,74811620,74812628,74816203,74816571,74816931,74817194,74818231,74821057,74824256,74829213,74835265,74835775	74764362,74778683,74780584,74782325,74799697,74802676,74809797,74810002,74810420,74811738,74812782,74816265,74816690,74817107,74817277,74818314,74821137,74824307,74829343,74835447,74836281	Gene ID= ENSG00000119596.17 TPM= 15.76 Transcript Type= protein_coding
chr14	74797980	74837309	74797980	74837309	+	transcript2828.chr14.nic@YLPM1	transcript2828.chr14.nic	protein_coding	74797980,74802556,74809380,74809910,74810225,74811620,74812628,74816203,74816571,74816931,74817194,74818231,74821057,74824256,74829213,74835265,74835775	74799697,74802676,74809797,74810002,74810420,74811738,74812782,74816265,74816690,74817107,74817277,74818314,74821137,74824307,74829343,74835447,74837309	Gene ID= ENSG00000119596.17 TPM= 2.92 Transcript Type= NA
chr14	74881893	74903745	74881893	74903745	+	ENST00000334220.8@DLST	ENST00000334220.8	protein_coding	74881893,74882591,74885586,74889095,74889275,74889897,74891056,74892834,74893348,74894312,74898369,74899923,74900289,74901066,74902196	74882016,74882624,74885634,74889147,74889349,74889952,74891167,74892986,74893424,74894409,74898499,74899996,74900372,74901233,74903745	Gene ID= ENSG00000119689.14 TPM= 2.34 Transcript Type= protein_coding
chr14	74897940	74901792	74897940	74901792	-	transcript2832.chr14.nnic@NA	transcript2832.chr14.nnic	NA	74897940	74901792	Gene ID= novel_gene_chr14_2833 TPM= 2.34 Transcript Type= NA
chr14	74921779	74923259	74921779	74923259	-	transcript2843.chr14.nnic@NA	transcript2843.chr14.nnic	NA	74921779	74923259	Gene ID= novel_gene_chr14_2844 TPM= 2.34 Transcript Type= NA
chr14	74941834	74955784	74941834	74955784	-	ENST00000555567.5@PGF	ENST00000555567.5	protein_coding	74955168,74953904,74949357,74948507,74946379,74946213,74941834	74955784,74953946,74949553,74948583,74946408,74946275,74942733	Gene ID= ENSG00000119630.13 TPM= 1.17 Transcript Type= protein_coding
chr14	74941841	74955626	74941841	74955626	-	ENST00000553716.5@PGF	ENST00000553716.5	protein_coding	74955168,74953904,74949357,74948507,74946379,74941841	74955626,74953946,74949553,74948583,74946408,74942733	Gene ID= ENSG00000119630.13 TPM= 5.84 Transcript Type= protein_coding
chr14	75013764	75051532	75013764	75051532	-	ENST00000355774.6@MLH3	ENST00000355774.6	protein_coding	75051380,75046376,75042379,75041615,75039911,75038340,75033419,75032068,75030543,75022995,75022814,75018829,75013764	75051532,75049718,75042477,75041700,75040015,75038412,75033490,75032179,75030702,75023018,75022892,75018980,75017201	Gene ID= ENSG00000119684.15 TPM= 3.5 Transcript Type= protein_coding
chr14	75013769	75051532	75013769	75051532	-	ENST00000380968.6@MLH3	ENST00000380968.6	protein_coding	75051380,75046376,75042379,75041615,75039911,75038340,75032068,75030543,75022995,75022814,75018829,75013769	75051532,75049718,75042477,75041700,75040015,75038412,75032179,75030702,75023018,75022892,75018980,75017201	Gene ID= ENSG00000119684.15 TPM= 2.34 Transcript Type= protein_coding
chr14	75051109	75052395	75051109	75052395	+	transcript2865.chr14.nnic@NA	transcript2865.chr14.nnic	NA	75051109	75052395	Gene ID= novel_gene_chr14_2866 TPM= 2.34 Transcript Type= NA
chr14	75053221	75064049	75053221	75064049	-	ENST00000238618.7@ACYP1	ENST00000238618.7	protein_coding	75063954,75063470,75053221	75064049,75063561,75053659	Gene ID= ENSG00000119640.8 TPM= 2.92 Transcript Type= protein_coding
chr14	75053243	75064015	75053243	75064015	-	ENST00000357971.7@ACYP1	ENST00000357971.7	protein_coding	75063954,75063470,75061684,75053243	75064015,75063561,75061762,75053659	Gene ID= ENSG00000119640.8 TPM= 1.75 Transcript Type= protein_coding
chr14	75053241	75057717	75053241	75057717	-	transcript2871.chr14.nnic@NA	transcript2871.chr14.nnic	NA	75053241	75057717	Gene ID= novel_gene_chr14_2872 TPM= 4.67 Transcript Type= NA
chr14	75059953	75062282	75059953	75062282	+	transcript2863.chr14.nnic@NA	transcript2863.chr14.nnic	NA	75059953	75062282	Gene ID= novel_gene_chr14_2864 TPM= 10.51 Transcript Type= NA
chr14	75079353	75127080	75079353	75127080	-	ENST00000238616.9@NEK9	ENST00000238616.9	protein_coding	75126703,75124046,75121119,75120510,75118830,75117195,75114203,75113339,75110321,75109685,75107343,75106502,75105950,75103842,75101657,75100992,75097100,75095372,75091270,75088480,75087018,75079353	75127080,75124223,75121174,75120580,75118935,75117326,75114313,75113403,75110371,75109877,75107487,75106702,75105996,75103997,75101765,75101153,75097270,75095431,75091478,75088641,75087230,75084686	Gene ID= ENSG00000119638.12 TPM= 1.75 Transcript Type= protein_coding
chr14	75082121	75127059	75082121	75127059	-	transcript2881.chr14.nic@NEK9	transcript2881.chr14.nic	protein_coding	75126703,75121119,75120510,75118830,75117195,75114203,75113339,75110321,75109685,75107343,75105950,75103842,75101657,75100992,75097100,75095372,75091270,75088480,75087018,75082121	75127059,75121174,75120580,75118935,75117326,75114313,75113403,75110371,75109877,75107487,75106702,75103997,75101765,75101153,75097270,75095431,75091478,75088641,75087230,75084686	Gene ID= ENSG00000119638.12 TPM= 13.43 Transcript Type= NA
chr14	75131470	75176631	75131470	75176631	-	ENST00000303575.8@TMED10	ENST00000303575.8	protein_coding	75176355,75152032,75147664,75135760,75131470	75176631,75152143,75147737,75135886,75135006	Gene ID= ENSG00000170348.8 TPM= 368.96 Transcript Type= protein_coding
chr14	75277200	75278045	75277200	75278045	+	transcript2893.chr14.nnic@NA	transcript2893.chr14.nnic	NA	75277200	75278045	Gene ID= novel_gene_chr14_2894 TPM= 2.34 Transcript Type= NA
chr14	75278774	75282230	75278774	75282230	+	ENST00000303562.8@FOS	ENST00000303562.8	protein_coding	75278774,75279877,75280560,75280783	75279123,75280128,75280667,75282230	Gene ID= ENSG00000170345.9 TPM= 112.09 Transcript Type= protein_coding
chr14	75278808	75282230	75278808	75282230	+	transcript2897.chr14.nic@FOS	transcript2897.chr14.nic	protein_coding	75278808,75279877,75280783	75279123,75280667,75282230	Gene ID= ENSG00000170345.9 TPM= 16.35 Transcript Type= NA
chr14	75278828	75282204	75278828	75282204	+	transcript2898.chr14.nnic@NA	transcript2898.chr14.nnic	NA	75278828	75282204	Gene ID= novel_gene_chr14_2899 TPM= 4.67 Transcript Type= NA
chr14	75428017	75470457	75428017	75470457	+	transcript2902.chr14.nnic@JDP2	transcript2902.chr14.nnic	protein_coding	75428017,75432118,75437898,75461426,75469290	75428252,75432336,75438121,75461530,75470457	Gene ID= ENSG00000140044.12 TPM= 6.81 Transcript Type= NA
chr14	75428019	75470457	75428019	75470457	+	transcript2903.chr14.nnic@JDP2	transcript2903.chr14.nnic	protein_coding	75428019,75431681,75437898,75461426,75469290	75428252,75431901,75438121,75461530,75470457	Gene ID= ENSG00000140044.12 TPM= 7.97 Transcript Type= NA
chr14	75433548	75470457	75433548	75470457	+	transcript2908.chr14.nnic@JDP2	transcript2908.chr14.nnic	protein_coding	75433548,75437898,75461426,75469290	75436409,75438121,75461530,75470457	Gene ID= ENSG00000140044.12 TPM= 7.39 Transcript Type= NA
chr14	75522425	75547015	75522425	75547015	+	ENST00000286639.6@BATF	ENST00000286639.6	protein_coding	75522425,75525084,75546462	75522745,75525188,75547015	Gene ID= ENSG00000156127.6 TPM= 9.34 Transcript Type= protein_coding
chr14	75605759	75648167	75605759	75648167	+	transcript2925.chr14.nic@FLVCR2	transcript2925.chr14.nic	protein_coding	75605759,75622079,75624612,75633629,75634910,75639352,75640955,75641182,75641843,75646401	75605994,75622220,75624752,75633696,75635013,75639462,75641060,75641293,75641898,75648167	Gene ID= ENSG00000119686.9 TPM= 2.34 Transcript Type= NA
chr14	75578595	75648167	75578595	75648167	+	transcript2930.chr14.nic@FLVCR2	transcript2930.chr14.nic	protein_coding	75578595,75622079,75633629,75634910,75639352,75640955,75641182,75641843,75646401	75579641,75622220,75633696,75635013,75639462,75641060,75641293,75641898,75648167	Gene ID= ENSG00000119686.9 TPM= 3.5 Transcript Type= NA
chr14	75578617	75648167	75578617	75648167	+	ENST00000238667.8@FLVCR2	ENST00000238667.8	protein_coding	75578617,75622079,75624612,75633629,75634910,75639352,75640955,75641182,75641843,75646401	75579641,75622220,75624752,75633696,75635013,75639462,75641060,75641293,75641898,75648167	Gene ID= ENSG00000119686.9 TPM= 32.69 Transcript Type= protein_coding
chr14	75985753	76083749	75985753	76083749	+	ENST00000314067.10@IFT43	ENST00000314067.10	protein_coding	75985753,75988885,76022327,76058642,76059327,76082295,76082617,76083227,76083458	75985840,75988977,76022394,76058674,76059373,76082367,76082692,76083289,76083749	Gene ID= ENSG00000119650.12 TPM= 9.63 Transcript Type= protein_coding
chr14	75985781	76083746	75985781	76083746	+	transcript2941.chr14.nic@IFT43	transcript2941.chr14.nic	protein_coding	75985781,75988885,76022327,76058642,76059327,76082295,76082617,76083227,76083458	75986308,75988977,76022394,76058674,76059373,76082367,76082692,76083289,76083746	Gene ID= ENSG00000119650.12 TPM= 5.25 Transcript Type= NA
chr14	75985783	76083746	75985783	76083746	+	transcript2942.chr14.nnic@IFT43	transcript2942.chr14.nnic	protein_coding	75985783,75988885,76022327,76058642,76059327,76082295,76082617,76083227,76083458	75985955,75988977,76022394,76058674,76059373,76082367,76082692,76083289,76083746	Gene ID= ENSG00000119650.12 TPM= 3.21 Transcript Type= NA
chr14	75985766	76083740	75985766	76083740	+	transcript2943.chr14.nic@IFT43	transcript2943.chr14.nic	protein_coding	75985766,75988885,76022327,76058642,76059327,76082295,76082617,76083227	75985840,75988977,76022394,76058674,76059373,76082367,76082692,76083740	Gene ID= ENSG00000119650.12 TPM= 2.63 Transcript Type= NA
chr14	75985766	76083746	75985766	76083746	+	transcript2944.chr14.nic@IFT43	transcript2944.chr14.nic	protein_coding	75985766,75988885,76022327,76058642,76059327,76082295,76083227,76083458	75985840,75988977,76022394,76058674,76059373,76082692,76083289,76083746	Gene ID= ENSG00000119650.12 TPM= 3.79 Transcript Type= NA
chr14	75958099	75983001	75958099	75983001	-	transcript2946.chr14.nnic@TGFB3	transcript2946.chr14.nnic	protein_coding	75982793,75980542,75971555,75971126,75965588,75963316,75960923,75958099	75983001,75981751,75971718,75971255,75965695,75963487,75961076,75959345	Gene ID= ENSG00000119699.7 TPM= 14.01 Transcript Type= NA
chr14	76759939	76762655	76759939	76762655	-	transcript3001.chr14.nnic@NA	transcript3001.chr14.nnic	NA	76759939	76762655	Gene ID= novel_gene_chr14_3002 TPM= 5.84 Transcript Type= NA
chr14	76761488	76764019	76761488	76764019	+	transcript2999.chr14.nnic@NA	transcript2999.chr14.nnic	NA	76761488	76764019	Gene ID= novel_gene_chr14_3000 TPM= 3.5 Transcript Type= NA
chr14	76774220	76783015	76774220	76783015	+	transcript2998.chr14.nnic@VASH1	transcript2998.chr14.nnic	protein_coding	76774220,76775892,76777959,76778946	76774715,76776273,76778071,76783015	Gene ID= ENSG00000071246.10 TPM= 3.5 Transcript Type= NA
chr14	76762189	76783015	76762189	76783015	+	ENST00000167106.8@VASH1	ENST00000167106.8	protein_coding	76762189,76769963,76771190,76773137,76775892,76777959,76778946	76763130,76770051,76771246,76773211,76776273,76778071,76783015	Gene ID= ENSG00000071246.10 TPM= 60.71 Transcript Type= protein_coding
chr14	76787246	76812913	76787246	76812913	-	transcript2974.chr14.nnic@ANGEL1	transcript2974.chr14.nnic	protein_coding	76812764,76809059,76807922,76807433,76806416,76804885,76804375,76803786,76803371,76791297,76790611,76787246	76812913,76809643,76808148,76807502,76806849,76805002,76804415,76803912,76803481,76791366,76790774,76789388	Gene ID= ENSG00000013523.9 TPM= 2.34 Transcript Type= NA
chr14	76787246	76812913	76787246	76812913	-	transcript2977.chr14.nic@ANGEL1	transcript2977.chr14.nic	protein_coding	76812764,76809059,76807922,76807433,76806416,76804375,76803786,76803371,76791297,76790611,76787246	76812913,76809643,76808148,76807502,76806849,76804415,76803912,76803481,76791366,76790774,76789388	Gene ID= ENSG00000013523.9 TPM= 2.34 Transcript Type= NA
chr14	76786178	76812940	76786178	76812940	-	ENST00000251089.6@ANGEL1	ENST00000251089.6	protein_coding	76812764,76809059,76807922,76807433,76806416,76803786,76803371,76791297,76790611,76786178	76812940,76809643,76808148,76807502,76806849,76803912,76803481,76791366,76790774,76789388	Gene ID= ENSG00000013523.9 TPM= 10.51 Transcript Type= protein_coding
chr14	77024543	77028699	77024543	77028699	-	ENST00000238647.4@IRF2BPL	ENST00000238647.4	protein_coding	77024543	77028699	Gene ID= ENSG00000119669.4 TPM= 115.59 Transcript Type= protein_coding
chr14	77028086	77031572	77028086	77031572	+	ENST00000619017.1@AC007686.3	ENST00000619017.1	antisense_RNA	77028086	77031572	Gene ID= ENSG00000273729.1 TPM= 1.17 Transcript Type= antisense_RNA
chr14	77098097	77117287	77098097	77117287	+	ENST00000361786.6@CIPC	ENST00000361786.6	protein_coding	77098097,77105657,77109812,77113425	77098361,77105844,77109981,77117287	Gene ID= ENSG00000198894.7 TPM= 59.55 Transcript Type= protein_coding
chr14	77274956	77320884	77274956	77320884	-	ENST00000261534.8@POMT2	ENST00000261534.8	protein_coding	77320434,77311949,77306337,77304692,77302835,77301090,77299455,77298689,77296164,77291314,77288762,77286744,77285481,77284950,77283797,77280392,77280021,77279823,77278729,77278394,77274956	77320884,77312033,77306441,77304800,77302943,77301249,77299561,77298771,77296273,77291380,77288831,77286822,77285632,77285041,77283873,77280463,77280080,77279928,77278869,77278508,77277481	Gene ID= ENSG00000009830.11 TPM= 12.84 Transcript Type= protein_coding
chr14	77320884	77331597	77320884	77331597	+	ENST00000216465.9@GSTZ1	ENST00000216465.9	protein_coding	77320884,77324870,77326838,77327472,77327912,77329123,77329755,77330310,77331069	77321183,77324921,77326905,77327552,77328037,77329201,77329807,77330359,77331597	Gene ID= ENSG00000100577.18 TPM= 4.67 Transcript Type= protein_coding
chr14	77335021	77377109	77335021	77377109	-	ENST00000216468.7@TMED8	ENST00000216468.7	protein_coding	77376936,77351673,77346349,77343697,77343178,77335021	77377109,77351751,77346478,77343823,77343483,77341988	Gene ID= ENSG00000100580.7 TPM= 26.85 Transcript Type= protein_coding
chr14	77426682	77457640	77426682	77457640	-	ENST00000557658.5@VIPAS39	ENST00000557658.5	protein_coding	77457495,77454010,77453299,77451187,77449714,77449293,77448494,77444249,77443119,77442560,77441066,77437808,77435844,77435259,77434262,77433842,77429681,77429006,77428370,77426682	77457640,77454102,77453401,77451333,77449752,77449357,77448550,77444341,77443152,77442662,77441093,77437881,77435919,77435393,77434303,77433931,77429767,77429095,77428474,77427636	Gene ID= ENSG00000151445.15 TPM= 8.17 Transcript Type= protein_coding
chr14	77458030	77469474	77458030	77469474	+	ENST00000216479.7@AHSA1	ENST00000216479.7	protein_coding	77458030,77459616,77462160,77462642,77464598,77465539,77468083,77468457,77469077	77458269,77459806,77462242,77462759,77464686,77465667,77468184,77468508,77469474	Gene ID= ENSG00000100591.7 TPM= 73.56 Transcript Type= protein_coding
chr14	77505997	77616773	77505997	77616773	-	ENST00000216484.6@SPTLC2	ENST00000216484.6	protein_coding	77616448,77597186,77578955,77576767,77570384,77562396,77557041,77555300,77552096,77521446,77518038,77505997	77616773,77597380,77579109,77576915,77570508,77562489,77557146,77555519,77552222,77521581,77518167,77512403	Gene ID= ENSG00000100596.6 TPM= 30.36 Transcript Type= protein_coding
chr14	77672404	77708020	77672404	77708020	-	ENST00000216489.7@ALKBH1	ENST00000216489.7	protein_coding	77707822,77704369,77694738,77679880,77675656,77672404	77708020,77704477,77694900,77679970,77675849,77674241	Gene ID= ENSG00000100601.9 TPM= 2.34 Transcript Type= protein_coding
chr14	77708071	77717598	77708071	77717598	+	ENST00000557342.5@SLIRP	ENST00000557342.5	protein_coding	77708071,77710838,77715772,77717496	77708208,77710896,77715879,77717598	Gene ID= ENSG00000119705.9 TPM= 44.37 Transcript Type= protein_coding
chr14	77708114	77717593	77708114	77717593	+	ENST00000555890.5@SLIRP	ENST00000555890.5	protein_coding	77708114,77710555,77710838,77715772,77717496	77708208,77710665,77710896,77715879,77717593	Gene ID= ENSG00000119705.9 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr14	77717599	77761190	77717599	77761190	-	ENST00000261531.11@SNW1	ENST00000261531.11	protein_coding	77761114,77754967,77751319,77738966,77738778,77736971,77735937,77734947,77732485,77730988,77723181,77720711,77718367,77717599	77761190,77755120,77751480,77739061,77738884,77737075,77736006,77735012,77732601,77731129,77723277,77720828,77718530,77718286	Gene ID= ENSG00000100603.13 TPM= 59.55 Transcript Type= protein_coding
chr14	77800083	77933954	77800083	77933954	+	ENST00000238561.9@ADCK1	ENST00000238561.9	protein_coding	77800083,77818968,77822435,77859076,77887091,77899100,77907803,77924457,77925764,77931518,77933220	77800170,77819113,77822518,77859279,77887249,77899258,77907919,77924606,77925961,77931711,77933954	Gene ID= ENSG00000063761.15 TPM= 9.34 Transcript Type= protein_coding
chr14	79279339	79862478	79279339	79862478	+	ENST00000557594.5@NRXN3	ENST00000557594.5	protein_coding	79279339,79467221,79663778,79697630,79805112,79861039	79280538,79467402,79663949,79697937,79805190,79862478	Gene ID= ENSG00000021645.18 TPM= 3.5 Transcript Type= protein_coding
chr14	79279413	79868290	79279413	79868290	+	ENST00000281127.11@NRXN3	ENST00000281127.11	protein_coding	79279413,79467221,79663778,79697630,79805112,79861663	79280538,79467402,79663949,79697937,79805199,79868290	Gene ID= ENSG00000021645.18 TPM= 1.17 Transcript Type= protein_coding
chr14	81175452	81220922	81175452	81220922	-	ENST00000553612.5@GTF2A1	ENST00000553612.5	protein_coding	81220489,81216413,81203900,81201594,81197409,81196108,81192519,81185531,81175452	81220922,81216514,81204104,81201658,81197484,81196241,81192839,81185620,81180330	Gene ID= ENSG00000165417.11 TPM= 2.34 Transcript Type= protein_coding
chr14	81221052	81222458	81221052	81222458	+	transcript3090.chr14.nnic@NA	transcript3090.chr14.nnic	NA	81221052	81222458	Gene ID= novel_gene_chr14_3091 TPM= 2.34 Transcript Type= NA
chr14	81260750	81265397	81260750	81265397	-	transcript3096.chr14.nnic@NA	transcript3096.chr14.nnic	NA	81260750	81265397	Gene ID= novel_gene_chr14_3097 TPM= 8.17 Transcript Type= NA
chr14	81472922	81533882	81472922	81533882	-	transcript3098.chr14.nic@SEL1L	transcript3098.chr14.nic	protein_coding	81533675,81527701,81526733,81506074,81504201,81502721,81499609,81499459,81498413,81497892,81495081,81492480,81490388,81489252,81487855,81487390,81486289,81485672,81484225,81479612,81472922	81533882,81527738,81526964,81506178,81504306,81502883,81499662,81499518,81498494,81498046,81495137,81492548,81490465,81489314,81487942,81487538,81486454,81485746,81484397,81479740,81477181	Gene ID= ENSG00000071537.13 TPM= 25.69 Transcript Type= NA
chr14	87933014	87993271	87933014	87993271	-	ENST00000261304.6@GALC	ENST00000261304.6	protein_coding	87992970,87988455,87988144,87986489,87984394,87982205,87976358,87968335,87965505,87963384,87950659,87949845,87947728,87945553,87941395,87939905,87933014	87993271,87988523,87988207,87986602,87984533,87982243,87976488,87968490,87965629,87963511,87950748,87949931,87947878,87945733,87941558,87939981,87934878	Gene ID= ENSG00000054983.16 TPM= 102.75 Transcript Type= protein_coding
chr14	88005124	88014811	88005124	88014811	+	ENST00000267549.4@GPR65	ENST00000267549.4	protein_coding	88005124,88010389	88005222,88014811	Gene ID= ENSG00000140030.5 TPM= 2.34 Transcript Type= protein_coding
chr14	88465778	88473931	88465778	88473931	-	transcript3138.chr14.nic@PTPN21	transcript3138.chr14.nic	protein_coding	88473665,88472244,88469922,88469499,88468916,88465778	88473931,88472465,88470050,88469733,88469076,88468265	Gene ID= ENSG00000070778.12 TPM= 8.76 Transcript Type= NA
chr14	88514463	88555013	88514463	88555013	-	transcript3141.chr14.nic@PTPN21	transcript3141.chr14.nic	protein_coding	88554651,88550238,88514463	88555013,88550619,88517261	Gene ID= ENSG00000070778.12 TPM= 2.34 Transcript Type= NA
chr14	88465778	88550622	88465778	88550622	-	ENST00000328736.7@PTPN21	ENST00000328736.7	protein_coding	88550238,88517092,88507923,88505304,88504425,88501281,88500783,88497203,88496413,88485782,88485076,88478920,88473665,88472244,88469922,88469499,88468916,88465778	88550622,88517261,88508020,88505371,88504495,88501368,88500871,88497290,88496492,88485842,88485160,88480352,88473802,88472465,88470050,88469733,88469076,88468265	Gene ID= ENSG00000070778.12 TPM= 50.79 Transcript Type= protein_coding
chr14	88562909	88627596	88562909	88627596	+	ENST00000251038.9@ZC3H14	ENST00000251038.9	protein_coding	88562909,88563651,88568039,88571084,88572030,88572578,88574693,88575840,88577985,88596734,88601924,88602828,88607243,88609267,88609712,88610834,88611745	88563169,88563693,88568153,88571124,88572225,88573007,88574853,88575940,88578140,88596808,88602083,88603060,88607363,88609403,88609803,88610940,88627596	Gene ID= ENSG00000100722.18 TPM= 3.5 Transcript Type= protein_coding
chr14	88562985	88612979	88562985	88612979	+	transcript3170.chr14.nic@ZC3H14	transcript3170.chr14.nic	protein_coding	88562985,88563651,88568039,88571084,88572030,88572578,88574693,88575840,88577985,88596734,88607243,88609267,88609715,88610834,88611745	88563169,88563693,88568153,88571124,88572225,88573007,88574853,88575940,88578140,88596808,88607363,88609403,88609803,88610940,88612979	Gene ID= ENSG00000100722.18 TPM= 4.67 Transcript Type= NA
chr14	88562970	88612407	88562970	88612407	+	ENST00000302216.12@ZC3H14	ENST00000302216.12	protein_coding	88562970,88563651,88568039,88571084,88572030,88572578,88574693,88575840,88577985,88607243,88609267,88609715,88610834,88611745	88563169,88563693,88568153,88571124,88572225,88573007,88574853,88575940,88578140,88607363,88609403,88609803,88610940,88612407	Gene ID= ENSG00000100722.18 TPM= 2.92 Transcript Type= protein_coding
chr14	88562985	88612979	88562985	88612979	+	transcript3176.chr14.nic@ZC3H14	transcript3176.chr14.nic	protein_coding	88562985,88563651,88568039,88571084,88572030,88572578,88574693,88575840,88577985,88607243,88609267,88609712,88610834,88611745	88563169,88563693,88568153,88571124,88572225,88573007,88574853,88575940,88578140,88607363,88609403,88609803,88610940,88612979	Gene ID= ENSG00000100722.18 TPM= 8.76 Transcript Type= NA
chr14	88563010	88611884	88563010	88611884	+	ENST00000556945.5@ZC3H14	ENST00000556945.5	protein_coding	88563010,88563651,88568039,88571084,88572030,88572578,88574693,88575840,88577985,88596734,88607243,88609267,88609712,88610834,88611745	88563169,88563693,88568153,88571124,88572225,88573007,88574853,88575940,88578140,88596808,88607363,88609403,88609803,88610940,88611884	Gene ID= ENSG00000100722.18 TPM= 5.84 Transcript Type= protein_coding
chr14	88824153	88877995	88824153	88877995	+	ENST00000345383.9@TTC8	ENST00000345383.9	protein_coding	88824153,88824574,88833693,88839452,88840865,88841037,88841425,88843806,88852971,88857190,88861222,88870059,88871549,88872330,88875026,88877294	88824214,88824821,88833722,88839572,88840928,88841196,88841514,88843850,88853056,88857277,88861332,88870198,88871723,88872452,88875109,88877995	Gene ID= ENSG00000165533.18 TPM= 9.34 Transcript Type= protein_coding
chr14	89161134	89619353	89161134	89619353	-	transcript3191.chr14.nic@FOXN3	transcript3191.chr14.nic	protein_coding	89619028,89486569,89411934,89350672,89280950,89190384,89180701,89161134	89619353,89486671,89412490,89350808,89281014,89190449,89180806,89162969	Gene ID= ENSG00000053254.15 TPM= 11.05 Transcript Type= NA
chr14	89161134	89417226	89161134	89417226	-	transcript3194.chr14.nic@FOXN3	transcript3194.chr14.nic	protein_coding	89416871,89411934,89350672,89280950,89190384,89180701,89161134	89417226,89412490,89350808,89281014,89190449,89180806,89162969	Gene ID= ENSG00000053254.15 TPM= 16.01 Transcript Type= NA
chr14	89161134	89619161	89161134	89619161	-	transcript3196.chr14.nic@FOXN3	transcript3196.chr14.nic	protein_coding	89619028,89486569,89411934,89350672,89280950,89180701,89161134	89619161,89486671,89412490,89350808,89281014,89180806,89162969	Gene ID= ENSG00000053254.15 TPM= 12.01 Transcript Type= NA
chr14	89161385	89417112	89161385	89417112	-	ENST00000557258.5@FOXN3	ENST00000557258.5	protein_coding	89416871,89411934,89350672,89280950,89180701,89161385	89417112,89412490,89350808,89281014,89180806,89162969	Gene ID= ENSG00000053254.15 TPM= 26.52 Transcript Type= protein_coding
chr14	89339976	89343736	89339976	89343736	+	transcript3208.chr14.nnic@NA	transcript3208.chr14.nnic	NA	89339976	89343736	Gene ID= novel_gene_chr14_3209 TPM= 2.34 Transcript Type= NA
chr14	89923308	89954750	89923308	89954750	-	ENST00000538485.6@EFCAB11	ENST00000538485.6	protein_coding	89954586,89953906,89950097,89932526,89931541,89923308	89954750,89954001,89950142,89932627,89931631,89924677	Gene ID= ENSG00000140025.15 TPM= 1.17 Transcript Type= protein_coding
chr14	89955960	90043341	89955960	90043341	+	transcript3214.chr14.nic@TDP1	transcript3214.chr14.nic	protein_coding	89955960,89963108,89966147,89967367,89971175,89975781,89980540,89984516,89985132,89988905,89989717,89991917,89993376,90019316,90033106,90043070	89956278,89963673,89966190,89967422,89971271,89975815,89980632,89984683,89985210,89989090,89989765,89991983,89993483,90019418,90033214,90043341	Gene ID= ENSG00000042088.13 TPM= 2.34 Transcript Type= NA
chr14	89955938	90043344	89955938	90043344	+	ENST00000393454.6@TDP1	ENST00000393454.6	protein_coding	89955938,89963108,89966147,89967367,89971175,89975781,89980540,89984516,89985132,89988905,89989717,89991917,89993376,90019316,90033106,90043070	89955970,89963673,89966190,89967422,89971271,89975815,89980632,89984683,89985210,89989090,89989765,89991983,89993483,90019418,90033214,90043344	Gene ID= ENSG00000042088.13 TPM= 2.34 Transcript Type= protein_coding
chr14	90061765	90185857	90061765	90185857	+	ENST00000282146.4@KCNK13	ENST00000282146.4	protein_coding	90061765,90184111	90062539,90185857	Gene ID= ENSG00000152315.4 TPM= 4.67 Transcript Type= protein_coding
chr14	90256575	90272624	90256575	90272624	+	transcript3221.chr14.nic@PSMC1	transcript3221.chr14.nic	protein_coding	90256575,90259160,90260115,90263318,90263662,90264041,90265070,90268224,90269397,90272273	90256600,90259213,90260211,90263442,90263847,90264169,90265166,90268413,90270352,90272624	Gene ID= ENSG00000100764.13 TPM= 5.84 Transcript Type= NA
chr14	90267856	90332137	90267856	90332137	-	ENST00000354366.7@NRDE2	ENST00000354366.7	protein_coding	90331841,90318005,90316578,90312394,90303935,90302720,90301239,90298260,90292697,90290221,90288217,90286354,90279062,90267856	90332137,90318113,90316811,90312543,90304382,90303125,90301372,90298380,90292872,90290607,90289145,90286492,90279133,90278461	Gene ID= ENSG00000119720.17 TPM= 11.68 Transcript Type= protein_coding
chr14	90278058	90281595	90278058	90281595	-	ENST00000612614.1@NRDE2	ENST00000612614.1	protein_coding	90278058	90281595	Gene ID= ENSG00000119720.17 TPM= 1.17 Transcript Type= retained_intron
chr14	90396983	90408261	90396983	90408261	+	ENST00000356978.8@CALM1	ENST00000356978.8	protein_coding	90396983,90400065,90401259,90403862,90404379,90404689	90397233,90400095,90401402,90403968,90404514,90408261	Gene ID= ENSG00000198668.10 TPM= 614.15 Transcript Type= protein_coding
chr14	90397932	90404807	90397932	90404807	+	ENST00000553964.5@CALM1	ENST00000553964.5	protein_coding	90397932,90401259,90403862,90404379,90404689	90400095,90401402,90403968,90404514,90404807	Gene ID= ENSG00000198668.10 TPM= 2.34 Transcript Type= retained_intron
chr14	90813674	90816476	90813674	90816476	-	transcript3263.chr14.nnic@NA	transcript3263.chr14.nnic	NA	90813674	90816476	Gene ID= novel_gene_chr14_3264 TPM= 2.34 Transcript Type= NA
chr14	91114062	91225355	91114062	91225355	+	transcript3279.chr14.nic@C14orf159	transcript3279.chr14.nic	protein_coding	91114062,91145221,91147781,91157639,91160266,91167225,91170003,91173289,91175934,91181186,91188910,91196375,91199757,91204706,91215405,91224684	91114283,91145313,91147858,91157690,91160397,91167378,91170186,91173439,91176056,91181389,91189170,91196474,91199905,91204825,91215556,91225355	Gene ID= ENSG00000133943.20 TPM= 2.34 Transcript Type= NA
chr14	91114062	91225355	91114062	91225355	+	transcript3280.chr14.nic@C14orf159	transcript3280.chr14.nic	protein_coding	91114062,91145221,91147781,91157639,91160266,91167225,91170003,91173289,91175934,91181186,91188910,91196375,91199757,91204706,91215405,91224684	91114283,91145313,91147858,91157690,91160397,91167378,91170201,91173403,91176056,91181389,91189170,91196474,91199905,91204825,91215556,91225355	Gene ID= ENSG00000133943.20 TPM= 2.34 Transcript Type= NA
chr14	91114641	91225355	91114641	91225355	+	transcript3285.chr14.nic@C14orf159	transcript3285.chr14.nic	protein_coding	91114641,91145221,91147781,91157639,91160266,91167225,91170003,91173289,91175934,91181186,91188910,91196375,91199757,91204706,91215405,91224684	91114994,91145313,91147858,91157690,91160397,91167378,91170186,91173439,91176056,91181389,91189170,91196474,91199905,91204825,91215556,91225355	Gene ID= ENSG00000133943.20 TPM= 2.34 Transcript Type= NA
chr14	91114062	91225355	91114062	91225355	+	transcript3287.chr14.nic@C14orf159	transcript3287.chr14.nic	protein_coding	91114062,91145221,91157639,91160266,91167225,91170003,91173289,91175934,91181186,91188910,91196375,91199757,91204706,91215405,91224684	91114283,91145313,91157690,91160397,91167378,91170186,91173439,91176056,91181389,91189170,91196474,91199905,91204825,91215556,91225355	Gene ID= ENSG00000133943.20 TPM= 5.84 Transcript Type= NA
chr14	91114366	91225355	91114366	91225355	+	transcript3293.chr14.nic@C14orf159	transcript3293.chr14.nic	protein_coding	91114366,91145221,91157639,91160266,91167225,91170003,91173289,91175934,91181186,91188910,91196375,91199757,91204706,91215405,91224684	91114528,91145313,91157690,91160397,91167378,91170201,91173439,91176056,91181389,91189170,91196474,91199905,91204825,91215556,91225355	Gene ID= ENSG00000133943.20 TPM= 3.5 Transcript Type= NA
chr14	91114063	91225355	91114063	91225355	+	transcript3297.chr14.nic@C14orf159	transcript3297.chr14.nic	protein_coding	91114063,91157639,91160266,91167225,91170003,91173289,91175934,91181186,91188910,91196375,91199757,91204706,91215405,91224684	91114283,91157690,91160397,91167378,91170186,91173403,91176056,91181389,91189170,91196474,91199905,91204825,91215556,91225355	Gene ID= ENSG00000133943.20 TPM= 2.34 Transcript Type= NA
chr14	91114063	91225632	91114063	91225632	+	ENST00000256324.14@C14orf159	ENST00000256324.14	protein_coding	91114063,91157639,91160266,91167225,91170003,91173289,91175934,91181186,91188910,91196375,91199757,91204706,91215405,91224684	91114283,91157690,91160397,91167378,91170201,91173439,91176056,91181389,91189170,91196474,91199905,91204825,91215556,91225632	Gene ID= ENSG00000133943.20 TPM= 12.84 Transcript Type= protein_coding
chr14	91114358	91225355	91114358	91225355	+	transcript3306.chr14.nic@C14orf159	transcript3306.chr14.nic	protein_coding	91114358,91157639,91160266,91167225,91170003,91173289,91175934,91181186,91188910,91196375,91199757,91204706,91215405,91224684	91114528,91157690,91160397,91167378,91170201,91173439,91176056,91181389,91189170,91196474,91199905,91204825,91215556,91225355	Gene ID= ENSG00000133943.20 TPM= 3.5 Transcript Type= NA
chr14	91114641	91225355	91114641	91225355	+	transcript3307.chr14.nic@C14orf159	transcript3307.chr14.nic	protein_coding	91114641,91157639,91160266,91167225,91170003,91173289,91175934,91181186,91188910,91196375,91199757,91204706,91215405,91224684	91114994,91157690,91160397,91167378,91170186,91173439,91176056,91181389,91189170,91196474,91199905,91204825,91215556,91225355	Gene ID= ENSG00000133943.20 TPM= 2.34 Transcript Type= NA
chr14	91219338	91225331	91219338	91225331	+	transcript3313.chr14.nic@C14orf159	transcript3313.chr14.nic	protein_coding	91219338,91224684	91223795,91225331	Gene ID= ENSG00000133943.20 TPM= 2.34 Transcript Type= NA
chr14	91114390	91225355	91114390	91225355	+	ENST00000523816.5@C14orf159	ENST00000523816.5	protein_coding	91114390,91145221,91147781,91157639,91160266,91167225,91170003,91173289,91175934,91181186,91188910,91196375,91199757,91204706,91215405,91224684	91114528,91145313,91147858,91157690,91160397,91167378,91170186,91173439,91176056,91181389,91189170,91196474,91199905,91204825,91215556,91225355	Gene ID= ENSG00000133943.20 TPM= 1.17 Transcript Type= protein_coding
chr14	91114442	91225352	91114442	91225352	+	ENST00000428926.6@C14orf159	ENST00000428926.6	protein_coding	91114442,91157639,91160266,91167225,91170003,91173289,91175934,91181186,91188910,91196375,91199757,91204706,91215405,91224684	91114528,91157690,91160397,91167378,91170186,91173439,91176056,91181389,91189170,91196474,91199905,91204825,91215556,91225352	Gene ID= ENSG00000133943.20 TPM= 1.17 Transcript Type= protein_coding
chr14	91232530	91264517	91232530	91264517	-	transcript3319.chr14.nnic@GPR68	transcript3319.chr14.nnic	protein_coding	91264335,91232530	91264517,91235179	Gene ID= ENSG00000119714.10 TPM= 4.29 Transcript Type= NA
chr14	91232532	91264767	91232532	91264767	-	transcript3320.chr14.nnic@GPR68	transcript3320.chr14.nnic	protein_coding	91264510,91232532	91264767,91235179	Gene ID= ENSG00000119714.10 TPM= 15.96 Transcript Type= NA
chr14	91232535	91244721	91232535	91244721	-	transcript3322.chr14.nnic@GPR68	transcript3322.chr14.nnic	protein_coding	91244435,91232535	91244721,91235179	Gene ID= ENSG00000119714.10 TPM= 4.29 Transcript Type= NA
chr14	91287637	91417856	91287637	91417856	-	transcript3326.chr14.nic@CCDC88C	transcript3326.chr14.nic	protein_coding	91417631,91416738,91408659,91359642,91343599,91342380,91339884,91339278,91338489,91338005,91325910,91324779,91321120,91315650,91313080,91309859,91308351,91307038,91305765,91303701,91299927,91297305,91294173,91290995,91287637	91417856,91416838,91408767,91359711,91343657,91342463,91340024,91339462,91338570,91338163,91326056,91324923,91321304,91315787,91314150,91309986,91308492,91307226,91305926,91303978,91300070,91297491,91294318,91291084,91289343	Gene ID= ENSG00000015133.18 TPM= 2.34 Transcript Type= NA
chr14	91378641	91417599	91378641	91417599	-	transcript3332.chr14.nic@CCDC88C	transcript3332.chr14.nic	protein_coding	91416738,91408659,91378641	91417599,91408767,91379885	Gene ID= ENSG00000015133.18 TPM= 3.5 Transcript Type= NA
chr14	91271325	91417777	91271325	91417777	-	ENST00000389857.10@CCDC88C	ENST00000389857.10	protein_coding	91417631,91416738,91408659,91359642,91343599,91342380,91339884,91339278,91338489,91338005,91325910,91324779,91321120,91315650,91313080,91309859,91308351,91307038,91305765,91303701,91299927,91297305,91294173,91290995,91289105,91283329,91281457,91279238,91277922,91271325	91417777,91416838,91408767,91359711,91343657,91342463,91340024,91339462,91338570,91338163,91326056,91324923,91321304,91315787,91314150,91309986,91308492,91307226,91305926,91303978,91300070,91297491,91294318,91291084,91289343,91283517,91281525,91279306,91278211,91273653	Gene ID= ENSG00000015133.18 TPM= 25.69 Transcript Type= protein_coding
chr14	91378659	91417844	91378659	91417844	-	ENST00000553403.1@CCDC88C	ENST00000553403.1	protein_coding	91417631,91416738,91408659,91378659	91417844,91416838,91408767,91379885	Gene ID= ENSG00000015133.18 TPM= 1.17 Transcript Type= protein_coding
chr14	91457611	91510511	91457611	91510511	-	transcript3340.chr14.nic@PPP4R3A	transcript3340.chr14.nic	protein_coding	91510075,91509506,91490747,91485632,91481576,91476909,91476408,91475850,91473239,91473033,91470837,91465250,91462735,91462049,91461381,91457611	91510511,91509704,91490802,91485730,91482193,91476986,91476524,91475966,91473370,91473135,91470995,91465419,91462877,91462239,91461607,91458869	Gene ID= ENSG00000100796.17 TPM= 6.42 Transcript Type= NA
chr14	91503483	91505458	91503483	91505458	+	transcript3363.chr14.nnic@NA	transcript3363.chr14.nnic	NA	91503483	91505458	Gene ID= novel_gene_chr14_3364 TPM= 3.5 Transcript Type= NA
chr14	91756756	91759983	91756756	91759983	-	transcript3365.chr14.nnic@NA	transcript3365.chr14.nnic	NA	91756756	91759983	Gene ID= novel_gene_chr14_3366 TPM= 3.5 Transcript Type= NA
chr14	91869410	91874152	91869410	91874152	-	transcript3408.chr14.nnic@NA	transcript3408.chr14.nnic	NA	91869410	91874152	Gene ID= novel_gene_chr14_3409 TPM= 3.5 Transcript Type= NA
chr14	91869412	91947694	91869412	91947694	-	transcript3388.chr14.nnic@FBLN5	transcript3388.chr14.nnic	protein_coding	91947213,91942907,91940565,91936947,91894950,91891221,91887193,91882954,91881292,91877487,91873497,91869412	91947694,91942961,91940616,91937201,91895072,91891337,91887312,91883076,91881418,91877682,91873675,91870385	Gene ID= ENSG00000140092.14 TPM= 26.85 Transcript Type= NA
chr14	91869441	91947399	91869441	91947399	-	ENST00000267620.14@FBLN5	ENST00000267620.14	protein_coding	91947213,91942907,91940565,91938330,91936947,91894950,91891221,91887193,91882954,91881292,91877487,91869441	91947399,91942961,91940616,91938452,91937201,91895072,91891337,91887312,91883076,91881418,91877682,91870385	Gene ID= ENSG00000140092.14 TPM= 150.04 Transcript Type= protein_coding
chr14	91965991	92040059	91965991	92040059	-	ENST00000267622.8@TRIP11	ENST00000267622.8	protein_coding	92039547,92033192,92025310,92021556,92017682,92015696,92014215,92011755,92010986,92007640,92003419,91999968,91999240,91995352,91993809,91988284,91976108,91975172,91974627,91972717,91965991	92040059,92033253,92025420,92021831,92017750,92015861,92014577,92011795,92011072,92007852,92006448,92000108,91999433,91995515,91993912,91988383,91976189,91975286,91974743,91972861,91969893	Gene ID= ENSG00000100815.12 TPM= 5.84 Transcript Type= protein_coding
chr14	92058552	92106621	92058552	92106621	-	ENST00000545170.5@ATXN3	ENST00000545170.5	protein_coding	92106529,92096674,92096093,92093746,92093252,92088730,92083126,92082300,92080965,92080541,92070935,92058552	92106621,92096838,92096137,92093831,92093318,92088817,92083258,92082466,92081061,92080567,92071053,92064414	Gene ID= ENSG00000066427.21 TPM= 1.75 Transcript Type= protein_coding
chr14	92058552	92106621	92058552	92106621	-	ENST00000393287.9@ATXN3	ENST00000393287.9	protein_coding	92106529,92096674,92096093,92088730,92083126,92082300,92080965,92070935,92058552	92106621,92096838,92096137,92088817,92083258,92082466,92081061,92071053,92064414	Gene ID= ENSG00000066427.21 TPM= 1.75 Transcript Type= protein_coding
chr14	92070745	92106562	92070745	92106562	-	ENST00000532032.5@ATXN3	ENST00000532032.5	protein_coding	92106529,92096674,92096093,92093746,92093252,92088730,92083126,92082300,92080965,92070745	92106562,92096838,92096137,92093831,92093318,92088817,92083258,92082466,92081061,92071053	Gene ID= ENSG00000066427.21 TPM= 1.17 Transcript Type= protein_coding
chr14	92116122	92121724	92116122	92121724	-	ENST00000553514.5@NDUFB1	ENST00000553514.5	protein_coding	92121642,92118849,92117498,92116122	92121724,92118966,92117642,92116229	Gene ID= ENSG00000183648.9 TPM= 7.01 Transcript Type= protein_coding
chr14	92121937	92172145	92121937	92172145	+	ENST00000298875.8@CPSF2	ENST00000298875.8	protein_coding	92121937,92126122,92130951,92134011,92134250,92135367,92138232,92142164,92143004,92154358,92155123,92156479,92157659,92158983,92161112,92161652	92122128,92126180,92131133,92134170,92134355,92135496,92138347,92142351,92143294,92154458,92155323,92156631,92157884,92159282,92161246,92172145	Gene ID= ENSG00000165934.12 TPM= 17.51 Transcript Type= protein_coding
chr14	92140436	92143106	92140436	92143106	-	transcript3447.chr14.nnic@NA	transcript3447.chr14.nnic	NA	92140436	92143106	Gene ID= novel_gene_chr14_3448 TPM= 3.5 Transcript Type= NA
chr14	92513774	92688994	92513774	92688994	+	ENST00000216487.11@RIN3	ENST00000216487.11	protein_coding	92513774,92555751,92577360,92615407,92641238,92651582,92659161,92676475,92684987,92687926	92513976,92555955,92577477,92615479,92641329,92653075,92659469,92676606,92685150,92688994	Gene ID= ENSG00000100599.15 TPM= 127.27 Transcript Type= protein_coding
chr14	92691944	92694008	92691944	92694008	+	transcript3455.chr14.nnic@NA	transcript3455.chr14.nnic	NA	92691944	92694008	Gene ID= novel_gene_chr14_3456 TPM= 2.34 Transcript Type= NA
chr14	92703809	92748702	92703809	92748702	-	ENST00000334869.8@LGMN	ENST00000334869.8	protein_coding	92748489,92732649,92718747,92717380,92716136,92714376,92713823,92712805,92711837,92711659,92709672,92706483,92704640,92703809	92748702,92732815,92718844,92717461,92716221,92714451,92713885,92712871,92711955,92711748,92709872,92706653,92704707,92704361	Gene ID= ENSG00000100600.14 TPM= 139.53 Transcript Type= protein_coding
chr14	92703839	92748645	92703839	92748645	-	ENST00000557434.5@LGMN	ENST00000557434.5	protein_coding	92748489,92732649,92718747,92717380,92716136,92714376,92713823,92712805,92711837,92711659,92709672,92704640,92703839	92748645,92732815,92718844,92717461,92716221,92714451,92713885,92712871,92711955,92711748,92709872,92704707,92704361	Gene ID= ENSG00000100600.14 TPM= 3.5 Transcript Type= protein_coding
chr14	92703807	92748612	92703807	92748612	-	ENST00000555699.5@LGMN	ENST00000555699.5	protein_coding	92748489,92732649,92718747,92717380,92716136,92714376,92713823,92712805,92711837,92711659,92709672,92703807	92748612,92732815,92718844,92717461,92716221,92714451,92713885,92712871,92711955,92711748,92709872,92704361	Gene ID= ENSG00000100600.14 TPM= 8.76 Transcript Type= protein_coding
chr14	92794231	92839963	92794231	92839963	+	ENST00000163416.6@GOLGA5	ENST00000163416.6	protein_coding	92794231,92797408,92806736,92809300,92810254,92811551,92816251,92819708,92824546,92833122,92835559,92837386,92839366	92794456,92797981,92806963,92809519,92810377,92811754,92816421,92819836,92824644,92833347,92835664,92837449,92839963	Gene ID= ENSG00000066455.12 TPM= 88.74 Transcript Type= protein_coding
chr14	92799445	92803808	92799445	92803808	-	transcript3471.chr14.nnic@NA	transcript3471.chr14.nnic	NA	92799445	92803808	Gene ID= novel_gene_chr14_3472 TPM= 4.67 Transcript Type= NA
chr14	92919728	92920685	92919728	92920685	+	transcript3473.chr14.nnic@NA	transcript3473.chr14.nnic	NA	92919728,92919965	92919932,92920685	Gene ID= novel_gene_chr14_3474 TPM= 2.34 Transcript Type= NA
chr14	92939753	93115926	92939753	93115926	-	transcript3485.chr14.nic@ITPK1	transcript3485.chr14.nic	protein_coding	93115069,93076595,93016676,92993880,92962751,92962355,92958201,92951946,92946331,92939753	93115926,93076619,93016801,92993997,92962849,92962395,92958366,92952013,92946493,92941904	Gene ID= ENSG00000100605.16 TPM= 37.4 Transcript Type= NA
chr14	92939862	93115279	92939862	93115279	-	ENST00000555495.5@ITPK1	ENST00000555495.5	protein_coding	93115069,93016676,92993880,92962751,92962355,92958201,92951946,92946331,92939862	93115279,93016801,92993997,92962849,92962395,92958366,92952013,92946493,92941904	Gene ID= ENSG00000100605.16 TPM= 29.42 Transcript Type= protein_coding
chr14	93067452	93072152	93067452	93072152	+	ENST00000553639.1@ITPK1-AS1	ENST00000553639.1	antisense_RNA	93067452	93072152	Gene ID= ENSG00000258730.1 TPM= 9.34 Transcript Type= antisense_RNA
chr14	93182196	93184928	93182196	93184928	-	ENST00000298894.4@MOAP1	ENST00000298894.4	protein_coding	93184810,93184559,93182196	93184928,93184713,93184362	Gene ID= ENSG00000165943.4 TPM= 53.71 Transcript Type= protein_coding
chr14	93182199	93184923	93182199	93184923	-	ENST00000556883.1@MOAP1	ENST00000556883.1	protein_coding	93184559,93182199	93184923,93184362	Gene ID= ENSG00000165943.4 TPM= 8.17 Transcript Type= protein_coding
chr14	93184951	93187086	93184951	93187086	+	ENST00000283534.4@TMEM251	ENST00000283534.4	protein_coding	93184951,93186260	93185032,93187086	Gene ID= ENSG00000153485.5 TPM= 14.01 Transcript Type= protein_coding
chr14	93185013	93187089	93185013	93187089	+	ENST00000415050.2@TMEM251	ENST00000415050.2	protein_coding	93185013,93186260	93185485,93187089	Gene ID= ENSG00000153485.5 TPM= 25.69 Transcript Type= protein_coding
chr14	93202894	93207094	93202894	93207094	-	ENST00000306954.4@GON7	ENST00000306954.4	protein_coding	93206830,93202894	93207094,93203782	Gene ID= ENSG00000170270.4 TPM= 17.51 Transcript Type= protein_coding
chr14	93207056	93229215	93207056	93229215	+	ENST00000013070.10@UBR7	ENST00000013070.10	protein_coding	93207056,93209824,93210648,93212032,93214929,93215176,93218527,93219212,93220249,93222313,93226943	93207441,93209957,93210708,93212127,93214982,93215281,93218735,93219361,93220411,93222374,93229215	Gene ID= ENSG00000012963.14 TPM= 23.35 Transcript Type= protein_coding
chr14	93207243	93227118	93207243	93227118	+	ENST00000553674.1@UBR7	ENST00000553674.1	protein_coding	93207243,93210648,93212032,93214929,93215176,93218527,93219212,93220249,93222313,93226943	93207441,93210708,93212127,93214982,93215281,93218735,93219361,93220411,93222374,93227118	Gene ID= ENSG00000012963.14 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr14	93287628	93333092	93287628	93333092	-	ENST00000298896.7@BTBD7	ENST00000298896.7	protein_coding	93332820,93295970,93293858,93287628	93333092,93296157,93294937,93288707	Gene ID= ENSG00000011114.14 TPM= 7.01 Transcript Type= protein_coding
chr14	93332475	93334666	93332475	93334666	+	transcript3520.chr14.nnic@NA	transcript3520.chr14.nnic	NA	93332475	93334666	Gene ID= novel_gene_chr14_3521 TPM= 5.84 Transcript Type= NA
chr14	93927352	93929606	93927352	93929606	+	transcript3525.chr14.nnic@NA	transcript3525.chr14.nnic	NA	93927352	93929606	Gene ID= novel_gene_chr14_3526 TPM= 3.5 Transcript Type= NA
chr14	93934153	93976791	93934153	93976791	-	ENST00000555019.5@ASB2	ENST00000555019.5	protein_coding	93976434,93964334,93956766,93954317,93953352,93950999,93947349,93939108,93937698,93934153	93976791,93964612,93956870,93954483,93953507,93951244,93947520,93939672,93937851,93934792	Gene ID= ENSG00000100628.11 TPM= 7.01 Transcript Type= protein_coding
chr14	94026329	94048930	94026329	94048930	+	ENST00000203664.9@OTUB2	ENST00000203664.9	protein_coding	94026329,94037380,94038963,94043971,94044586,94045716	94026540,94037475,94039081,94044055,94044780,94048930	Gene ID= ENSG00000089723.9 TPM= 4.67 Transcript Type= protein_coding
chr14	94048291	94081245	94048291	94081245	-	ENST00000621632.4@DDX24	ENST00000621632.4	protein_coding	94081119,94079025,94062097,94060913,94060098,94057822,94054996,94052998,94048291	94081245,94079747,94062621,94061066,94060613,94057897,94055184,94053127,94051462	Gene ID= ENSG00000089737.16 TPM= 144.78 Transcript Type= protein_coding
chr14	94050920	94081198	94050920	94081198	-	ENST00000555762.1@DDX24	ENST00000555762.1	protein_coding	94081119,94079025,94062097,94060913,94060098,94054996,94052998,94050920	94081198,94079747,94062621,94061066,94060613,94057897,94053127,94051462	Gene ID= ENSG00000089737.16 TPM= 12.84 Transcript Type= retained_intron
chr14	94081282	94102714	94081282	94102714	+	ENST00000555523.5@IFI27L1	ENST00000555523.5	protein_coding	94081282,94096887,94100739,94101814,94102477	94081449,94096965,94100771,94101975,94102714	Gene ID= ENSG00000165948.10 TPM= 10.51 Transcript Type= protein_coding
chr14	94099326	94102709	94099326	94102709	+	transcript3543.chr14.nnic@NA	transcript3543.chr14.nnic	NA	94099326	94102709	Gene ID= novel_gene_chr14_3544 TPM= 3.5 Transcript Type= NA
chr14	94110815	94116695	94110815	94116695	+	ENST00000612813.4@IFI27	ENST00000612813.4	protein_coding	94110815,94111659,94114851,94115781,94116442	94110978,94111773,94114880,94115942,94116695	Gene ID= ENSG00000165949.12 TPM= 3.6 Transcript Type= protein_coding
chr14	94110734	94116690	94110734	94116690	+	ENST00000618863.1@IFI27	ENST00000618863.1	protein_coding	94110734,94114851,94115781,94116442	94110797,94114880,94115942,94116690	Gene ID= ENSG00000165949.12 TPM= 7.3 Transcript Type= protein_coding
chr14	94110749	94116695	94110749	94116695	+	ENST00000621160.4@IFI27	ENST00000621160.4	protein_coding	94110749,94111625,94114851,94115781,94116442	94110797,94111773,94114880,94115942,94116695	Gene ID= ENSG00000165949.12 TPM= 56.14 Transcript Type= protein_coding
chr14	94110733	94116698	94110733	94116698	+	ENST00000616764.4@IFI27	ENST00000616764.4	protein_coding	94110733,94110926,94111625,94114851,94115781,94116442	94110797,94110978,94111773,94114880,94115942,94116698	Gene ID= ENSG00000165949.12 TPM= 3.01 Transcript Type= protein_coding
chr14	94127781	94129664	94127781	94129664	-	ENST00000238609.3@IFI27L2	ENST00000238609.3	protein_coding	94129558,94129262,94128514,94127781	94129664,94129291,94128675,94127992	Gene ID= ENSG00000119632.3 TPM= 37.36 Transcript Type= protein_coding
chr14	94174312	94279735	94174312	94279735	+	ENST00000304338.7@PPP4R4	ENST00000304338.7	protein_coding	94174312,94176054,94208464,94230587,94231242,94233653,94234562,94237565,94240673,94241788,94242289,94244635,94245587,94246357,94250172,94251749,94256460,94258783,94259295,94264878,94265387,94265794,94266959,94275374,94278619	94174582,94176127,94208566,94230734,94231315,94233759,94234669,94237686,94240795,94241957,94242408,94244712,94245670,94246539,94250277,94251896,94256604,94258824,94259369,94264947,94265473,94265887,94267029,94275521,94279735	Gene ID= ENSG00000119698.11 TPM= 1.17 Transcript Type= protein_coding
chr14	94378376	94390693	94378376	94390693	-	ENST00000393088.8@SERPINA1	ENST00000393088.8	protein_coding	94390457,94388801,94388560,94382592,94380871,94379464,94378376	94390693,94389010,94388663,94383241,94381141,94379611,94378640	Gene ID= ENSG00000197249.13 TPM= 111.26 Transcript Type= protein_coding
chr14	94376747	94390692	94376747	94390692	-	ENST00000448921.5@SERPINA1	ENST00000448921.5	protein_coding	94390420,94388819,94388560,94382592,94380871,94379464,94376747	94390692,94389010,94388663,94383241,94381141,94379611,94378640	Gene ID= ENSG00000197249.13 TPM= 13.3 Transcript Type= protein_coding
chr14	94376747	94390692	94376747	94390692	-	ENST00000437397.5@SERPINA1	ENST00000437397.5	protein_coding	94390420,94388560,94382592,94380871,94379464,94376747	94390692,94388663,94383241,94381141,94379611,94378640	Gene ID= ENSG00000197249.13 TPM= 13.3 Transcript Type= protein_coding
chr14	94376747	94390692	94376747	94390692	-	ENST00000355814.8@SERPINA1	ENST00000355814.8	protein_coding	94390420,94382592,94380871,94379464,94376747	94390692,94383241,94381141,94379611,94378640	Gene ID= ENSG00000197249.13 TPM= 13.5 Transcript Type= protein_coding
chr14	94378389	94390662	94378389	94390662	-	ENST00000404814.8@SERPINA1	ENST00000404814.8	protein_coding	94390457,94388560,94382592,94380871,94379464,94378389	94390662,94388660,94383241,94381141,94379611,94378640	Gene ID= ENSG00000197249.13 TPM= 76.93 Transcript Type= protein_coding
chr14	94378349	94388820	94378349	94388820	-	ENST00000393087.8@SERPINA1	ENST00000393087.8	protein_coding	94388560,94382592,94380871,94379464,94378349	94388820,94383241,94381141,94379611,94378640	Gene ID= ENSG00000197249.13 TPM= 905.22 Transcript Type= protein_coding
chr14	94378373	94388847	94378373	94388847	-	ENST00000636712.1@SERPINA1	ENST00000636712.1	protein_coding	94388801,94388560,94382592,94380871,94379464,94378373	94388847,94388660,94383241,94381141,94379611,94378640	Gene ID= ENSG00000197249.13 TPM= 289.9 Transcript Type= protein_coding
chr14	94612377	94624052	94612377	94624052	+	ENST00000393078.4@SERPINA3	ENST00000393078.4	protein_coding	94612377,94614434,94619195,94622341,94623611	94612447,94615084,94619468,94622491,94624052	Gene ID= ENSG00000196136.17 TPM= 26.85 Transcript Type= protein_coding
chr14	94612384	94624055	94612384	94624055	+	ENST00000393080.8@SERPINA3	ENST00000393080.8	protein_coding	94612384,94614434,94619195,94622341,94623611	94612443,94615084,94619468,94622491,94624055	Gene ID= ENSG00000196136.17 TPM= 8.17 Transcript Type= protein_coding
chr14	95088953	95089060	95088953	95089060	+	transcript3583.chr14.nnic@NA	transcript3583.chr14.nnic	NA	95088953	95089060	Gene ID= novel_gene_chr14_3584 TPM= 3.5 Transcript Type= NA
chr14	95157645	95179933	95157645	95179933	+	ENST00000554631.2@DICER1-AS1	ENST00000554631.2	antisense_RNA	95157645,95179499,95179751	95159035,95179633,95179933	Gene ID= ENSG00000235706.7 TPM= 1.17 Transcript Type= antisense_RNA
chr14	95157676	95179925	95157676	95179925	+	transcript3588.chr14.nic@DICER1-AS1	transcript3588.chr14.nic	antisense_RNA	95157676,95179499	95159035,95179925	Gene ID= ENSG00000235706.7 TPM= 2.34 Transcript Type= NA
chr14	95191531	95319921	95191531	95319921	-	transcript3589.chr14.nic@CLMN	transcript3589.chr14.nic	protein_coding	95319711,95230072,95223760,95221691,95215641,95213219,95210686,95209395,95202838,95196498,95194536,95193849,95193319,95191531	95319921,95230133,95223855,95221774,95215733,95213409,95210879,95209477,95204463,95196694,95194596,95193919,95193415,95191728	Gene ID= ENSG00000165959.11 TPM= 2.34 Transcript Type= NA
chr14	95191527	95319921	95191527	95319921	-	transcript3594.chr14.nic@CLMN	transcript3594.chr14.nic	protein_coding	95319711,95230072,95223760,95221691,95215641,95213219,95210686,95209395,95202838,95196498,95193849,95191527	95319921,95230133,95223855,95221774,95215733,95213409,95210879,95209477,95204463,95196694,95194596,95191732	Gene ID= ENSG00000165959.11 TPM= 4.67 Transcript Type= NA
chr14	95313664	95317611	95313664	95317611	+	transcript3597.chr14.nnic@NA	transcript3597.chr14.nnic	NA	95313664	95317611	Gene ID= novel_gene_chr14_3598 TPM= 3.5 Transcript Type= NA
chr14	95532912	95534781	95532912	95534781	-	transcript3601.chr14.nnic@NA	transcript3601.chr14.nnic	NA	95532912	95534781	Gene ID= novel_gene_chr14_3602 TPM= 5.84 Transcript Type= NA
chr14	95534593	95544718	95534593	95544718	+	ENST00000331334.4@GLRX5	ENST00000331334.4	protein_coding	95534593,95543947	95535384,95544718	Gene ID= ENSG00000182512.4 TPM= 92.24 Transcript Type= protein_coding
chr14	96039324	96093889	96039324	96093889	+	ENST00000555004.2@C14orf132	ENST00000555004.2	protein_coding	96039324,96086511	96039527,96093889	Gene ID= ENSG00000227051.6 TPM= 19.85 Transcript Type= protein_coding
chr14	96204795	96244164	96204795	96244164	+	ENST00000554311.1@BDKRB2	ENST00000554311.1	protein_coding	96204795,96237069,96240403	96204959,96237181,96244164	Gene ID= ENSG00000168398.6 TPM= 3.5 Transcript Type= protein_coding
chr14	96204838	96264763	96204838	96264763	+	transcript3613.chr14.nic@AL355102.2	transcript3613.chr14.nic	protein_coding	96204838,96237069,96262652,96263673	96204959,96237181,96262770,96264763	Gene ID= ENSG00000258691.1 TPM= 2.34 Transcript Type= NA
chr14	96279202	96363870	96279202	96363870	-	ENST00000359933.5@ATG2B	ENST00000359933.5	protein_coding	96362815,96347179,96345233,96344654,96343119,96341522,96334405,96333688,96332501,96332305,96331376,96329484,96328674,96328347,96325649,96323896,96322540,96322112,96317698,96317145,96316533,96315384,96315154,96313329,96313065,96312089,96311542,96311117,96309453,96306714,96305589,96304495,96303061,96302007,96295482,96294960,96292029,96291600,96290814,96290436,96289656,96279202	96363870,96347341,96345385,96344756,96343281,96341701,96334501,96333873,96332655,96332410,96331637,96329634,96328766,96328535,96325922,96323998,96322735,96322254,96317855,96317317,96316683,96315583,96315234,96313435,96313157,96312159,96311618,96311287,96309594,96306916,96305815,96304603,96303255,96302108,96295560,96295167,96292098,96291682,96290935,96290590,96289805,96285985	Gene ID= ENSG00000066739.11 TPM= 1.17 Transcript Type= protein_coding
chr14	96363477	96387288	96363477	96387288	+	ENST00000555181.5@GSKIP	ENST00000555181.5	protein_coding	96363477,96379688,96382247,96385523	96363568,96379788,96382505,96387288	Gene ID= ENSG00000100744.14 TPM= 9.34 Transcript Type= protein_coding
chr14	96363565	96365023	96363565	96365023	+	transcript3625.chr14.nnic@NA	transcript3625.chr14.nnic	NA	96363565	96365023	Gene ID= novel_gene_chr14_3626 TPM= 3.5 Transcript Type= NA
chr14	96502362	96567113	96502362	96567113	+	transcript3634.chr14.nic@PAPOLA	transcript3634.chr14.nic	protein_coding	96502362,96520055,96521006,96525310,96527430,96527953,96531475,96532331,96532511,96534491,96535879,96536976,96542243,96542774,96544149,96547797,96552480,96555847,96556175,96564955	96502600,96520228,96521072,96525391,96527539,96528006,96531586,96532420,96532649,96534563,96535999,96537060,96542296,96542893,96544258,96547918,96552622,96555947,96556413,96567113	Gene ID= ENSG00000090060.17 TPM= 26.85 Transcript Type= NA
chr14	96502373	96567111	96502373	96567111	+	ENST00000216277.12@PAPOLA	ENST00000216277.12	protein_coding	96502373,96520055,96521006,96525310,96527430,96527953,96531475,96532331,96532511,96534491,96535879,96536976,96542243,96542774,96544149,96547797,96552480,96555847,96556175,96560649,96562819,96564955	96502600,96520228,96521072,96525391,96527539,96528006,96531586,96532420,96532649,96534563,96535999,96537060,96542296,96542893,96544258,96547918,96552622,96555947,96556413,96560711,96562893,96567111	Gene ID= ENSG00000090060.17 TPM= 205.5 Transcript Type= protein_coding
chr14	96502401	96534885	96502401	96534885	+	ENST00000557320.5@PAPOLA	ENST00000557320.5	protein_coding	96502401,96520055,96521006,96525310,96527430,96527953,96531475,96532331,96532511	96502600,96520228,96521072,96525391,96527539,96528006,96531586,96532420,96534885	Gene ID= ENSG00000090060.17 TPM= 24.52 Transcript Type= protein_coding
chr14	96797304	96881613	96797304	96881613	+	ENST00000216639.7@VRK1	ENST00000216639.7	protein_coding	96797304,96833467,96837762,96846095,96847257,96852831,96853074,96855224,96856130,96856528,96860557,96876030,96881177	96797447,96833631,96837817,96846164,96847344,96852939,96853166,96855356,96856250,96856586,96860735,96876120,96881613	Gene ID= ENSG00000100749.7 TPM= 8.17 Transcript Type= protein_coding
chr14	99397746	99480879	99397746	99480879	-	ENST00000331768.9@SETD3	ENST00000331768.9	protein_coding	99480728,99465703,99463486,99461192,99459113,99458279,99413876,99412951,99406516,99405205,99404225,99400099,99397746	99480879,99465813,99463578,99461340,99459185,99458535,99413934,99413065,99406590,99405371,99404310,99400259,99399125	Gene ID= ENSG00000183576.12 TPM= 158.79 Transcript Type= protein_coding
chr14	99409804	99480788	99409804	99480788	-	ENST00000329331.7@SETD3	ENST00000329331.7	protein_coding	99480728,99465703,99463486,99461192,99459113,99458279,99413876,99412951,99409804	99480788,99465813,99463578,99461340,99459185,99458535,99413934,99413065,99410215	Gene ID= ENSG00000183576.12 TPM= 1.17 Transcript Type= protein_coding
chr14	99473170	99477761	99473170	99477761	+	transcript3667.chr14.nnic@NA	transcript3667.chr14.nnic	NA	99473170	99477761	Gene ID= novel_gene_chr14_3668 TPM= 4.67 Transcript Type= NA
chr14	99510624	99511313	99510624	99511313	+	transcript3679.chr14.nnic@NA	transcript3679.chr14.nnic	NA	99510624	99511313	Gene ID= novel_gene_chr14_3680 TPM= 8.17 Transcript Type= NA
chr14	99684314	99727301	99684314	99727301	+	ENST00000261835.7@CYP46A1	ENST00000261835.7	protein_coding	99684314,99691081,99691780,99699466,99700015,99706647,99707568,99715810,99716137,99718054,99721239,99721956,99725391,99726190,99726557	99684536,99691161,99691861,99699539,99700101,99706785,99707678,99715960,99716199,99718126,99721323,99722066,99725479,99726256,99727301	Gene ID= ENSG00000036530.8 TPM= 1.17 Transcript Type= protein_coding
chr14	99737722	99942060	99737722	99942060	+	transcript3688.chr14.nnic@EML1	transcript3688.chr14.nnic	protein_coding	99737722,99850124,99850853,99865514,99878485,99891199,99894629,99897145,99898233,99900929,99907638,99909345,99910242,99911422,99914179,99914566,99917782,99920789,99936029,99936247,99937817,99939197,99939987	99737860,99850332,99851035,99865646,99878619,99891227,99894758,99897294,99898302,99901039,99907733,99909479,99910341,99911576,99914304,99914697,99917849,99920877,99936126,99936334,99937912,99939327,99942060	Gene ID= ENSG00000066629.16 TPM= 2.34 Transcript Type= NA
chr14	99793279	99941537	99793279	99941537	+	transcript3689.chr14.nnic@EML1	transcript3689.chr14.nnic	protein_coding	99793279,99850124,99850853,99865514,99878485,99891199,99894629,99897145,99898233,99900929,99907638,99909345,99910242,99911422,99914179,99914566,99917782,99920789,99936029,99936247,99937817,99939197,99939987	99793543,99850332,99851035,99865646,99878619,99891227,99894758,99897294,99898302,99901039,99907733,99909479,99910341,99911576,99914304,99914697,99917849,99920877,99936126,99936334,99937912,99939327,99941537	Gene ID= ENSG00000066629.16 TPM= 2.34 Transcript Type= NA
chr14	99737678	99942060	99737678	99942060	+	transcript3694.chr14.nic@EML1	transcript3694.chr14.nic	protein_coding	99737678,99850853,99865514,99878485,99891199,99894629,99897145,99898233,99900929,99907638,99909345,99910242,99911422,99914179,99914566,99917782,99920789,99936029,99936247,99937817,99939197,99939987	99737860,99851035,99865646,99878619,99891227,99894758,99897294,99898302,99901039,99907733,99909479,99910341,99911576,99914304,99914697,99917849,99920877,99936126,99936334,99937912,99939327,99942060	Gene ID= ENSG00000066629.16 TPM= 14.48 Transcript Type= NA
chr14	99737738	99882675	99737738	99882675	+	transcript3711.chr14.nic@EML1	transcript3711.chr14.nic	protein_coding	99737738,99850853,99865514,99878485	99737860,99851035,99865646,99882675	Gene ID= ENSG00000066629.16 TPM= 2.34 Transcript Type= NA
chr14	99793338	99942060	99793338	99942060	+	ENST00000262233.10@EML1	ENST00000262233.10	protein_coding	99793338,99850853,99865514,99878485,99891199,99894629,99897145,99898233,99900929,99907638,99909345,99910242,99911422,99914179,99914566,99917782,99920789,99936029,99936247,99937817,99939197,99939987	99793543,99851035,99865646,99878619,99891227,99894758,99897294,99898302,99901039,99907733,99909479,99910341,99911576,99914304,99914697,99917849,99920877,99936126,99936334,99937912,99939327,99942060	Gene ID= ENSG00000066629.16 TPM= 1.17 Transcript Type= protein_coding
chr14	100065278	100144236	100065278	100144236	+	ENST00000392920.7@EVL	ENST00000392920.7	protein_coding	100065278,100084687,100097481,100123539,100126707,100128519,100129563,100132719,100135905,100137578,100137740,100141180,100141736,100143701	100065511,100084855,100097658,100123602,100126771,100128748,100129684,100132779,100135968,100137644,100137802,100141246,100141793,100144236	Gene ID= ENSG00000196405.12 TPM= 65.85 Transcript Type= protein_coding
chr14	100065364	100144236	100065364	100144236	+	transcript3717.chr14.nic@EVL	transcript3717.chr14.nic	protein_coding	100065364,100084687,100097481,100123539,100126707,100128519,100129563,100132719,100135905,100137578,100137740,100141180,100141736,100143701	100065511,100084855,100097658,100123602,100126771,100128748,100129684,100132779,100135968,100137644,100138897,100141246,100141793,100144236	Gene ID= ENSG00000196405.12 TPM= 10.39 Transcript Type= NA
chr14	100065364	100144236	100065364	100144236	+	transcript3719.chr14.nic@EVL	transcript3719.chr14.nic	protein_coding	100065364,100084687,100097481,100123539,100126707,100128519,100129563,100132719,100135905,100137578,100137740,100141736,100143701	100065511,100084855,100097658,100123602,100126771,100128748,100129684,100132779,100135968,100137644,100141246,100141793,100144236	Gene ID= ENSG00000196405.12 TPM= 54.18 Transcript Type= NA
chr14	99971449	100144236	99971449	100144236	+	ENST00000402714.6@EVL	ENST00000402714.6	protein_coding	99971449,100084687,100097481,100123539,100126707,100128519,100129563,100132719,100135905,100137578,100137740,100141180,100141736,100143701	99972057,100084855,100097658,100123602,100126771,100128748,100129684,100132779,100135968,100137644,100137802,100141246,100141793,100144236	Gene ID= ENSG00000196405.12 TPM= 27.91 Transcript Type= protein_coding
chr14	100103190	100106497	100103190	100106497	-	transcript3733.chr14.nnic@NA	transcript3733.chr14.nnic	NA	100103190	100106497	Gene ID= novel_gene_chr14_3734 TPM= 5.84 Transcript Type= NA
chr14	100104904	100109179	100104904	100109179	-	transcript3735.chr14.nnic@NA	transcript3735.chr14.nnic	NA	100104904	100109179	Gene ID= novel_gene_chr14_3736 TPM= 40.87 Transcript Type= NA
chr14	100117646	100117732	100117646	100117732	+	transcript3731.chr14.nnic@NA	transcript3731.chr14.nnic	NA	100117646	100117732	Gene ID= novel_gene_chr14_3732 TPM= 2.34 Transcript Type= NA
chr14	100143957	100160163	100143957	100160163	-	ENST00000305631.6@DEGS2	ENST00000305631.6	protein_coding	100159506,100148968,100143957	100160163,100149710,100146907	Gene ID= ENSG00000168350.7 TPM= 7.01 Transcript Type= protein_coding
chr14	100238985	100282792	100238985	100282792	+	ENST00000262238.8@YY1	ENST00000262238.8	protein_coding	100238985,100262304,100274698,100276490,100277418	100239923,100262466,100274758,100276648,100282792	Gene ID= ENSG00000100811.12 TPM= 22.18 Transcript Type= protein_coding
chr14	100238300	100239100	100238300	100239100	-	transcript3778.chr14.nnic@NA	transcript3778.chr14.nnic	NA	100238300	100239100	Gene ID= novel_gene_chr14_3779 TPM= 3.5 Transcript Type= NA
chr14	100291111	100306533	100291111	100306533	-	ENST00000359232.7@SLC25A29	ENST00000359232.7	protein_coding	100306199,100298842,100293294,100291111	100306533,100298885,100293377,100293032	Gene ID= ENSG00000197119.12 TPM= 60.6 Transcript Type= protein_coding
chr14	100302777	100306441	100302777	100306441	-	transcript3774.chr14.nnic@NA	transcript3774.chr14.nnic	NA	100302777	100306441	Gene ID= novel_gene_chr14_3775 TPM= 7.01 Transcript Type= NA
chr14	100333788	100376327	100333788	100376327	-	transcript3786.chr14.nic@WARS	transcript3786.chr14.nic	protein_coding	100376260,100375283,100374136,100369087,100361708,100360554,100354447,100353687,100346746,100343275,100342398,100337062,100333788	100376327,100375546,100374265,100369258,100361921,100360662,100354566,100353869,100346846,100343387,100342571,100337202,100335036	Gene ID= ENSG00000140105.17 TPM= 16.16 Transcript Type= NA
chr14	100333788	100375640	100333788	100375640	-	transcript3797.chr14.nic@WARS	transcript3797.chr14.nic	protein_coding	100375283,100374136,100369087,100361708,100360554,100354447,100353687,100346746,100343275,100342398,100337062,100333788	100375640,100374244,100369258,100361921,100360662,100354566,100353869,100346846,100343387,100342571,100337202,100335036	Gene ID= ENSG00000140105.17 TPM= 29 Transcript Type= NA
chr14	100333788	100375618	100333788	100375618	-	transcript3811.chr14.nnic@WARS	transcript3811.chr14.nnic	protein_coding	100375511,100369087,100361708,100360554,100354447,100353687,100346746,100343275,100342398,100337062,100333788	100375618,100369258,100361921,100360662,100354566,100353869,100346846,100343387,100342571,100337202,100335036	Gene ID= ENSG00000140105.17 TPM= 12.66 Transcript Type= NA
chr14	100333818	100376805	100333818	100376805	-	ENST00000355338.6@WARS	ENST00000355338.6	protein_coding	100376260,100369087,100361708,100360554,100354447,100353687,100346746,100343275,100342398,100337062,100333818	100376805,100369258,100361921,100360662,100354566,100353869,100346846,100343387,100342571,100337202,100335036	Gene ID= ENSG00000140105.17 TPM= 7.01 Transcript Type= protein_coding
chr14	100333828	100375608	100333828	100375608	-	ENST00000344102.9@WARS	ENST00000344102.9	protein_coding	100375283,100361708,100360554,100354447,100353687,100346746,100343275,100342398,100337062,100333828	100375608,100361921,100360662,100354566,100353869,100346846,100343387,100342571,100337202,100335036	Gene ID= ENSG00000140105.17 TPM= 7.01 Transcript Type= protein_coding
chr14	100333788	100375644	100333788	100375644	-	ENST00000392882.6@WARS	ENST00000392882.6	protein_coding	100375283,100369087,100361708,100360554,100354447,100353687,100346746,100343275,100342398,100337062,100333788	100375644,100369258,100361921,100360662,100354566,100353869,100346846,100343387,100342571,100337202,100335036	Gene ID= ENSG00000140105.17 TPM= 191.3 Transcript Type= protein_coding
chr14	100333802	100376335	100333802	100376335	-	ENST00000358655.8@WARS	ENST00000358655.8	protein_coding	100376260,100361708,100360554,100354447,100353687,100346746,100343275,100342398,100337062,100333802	100376335,100361921,100360662,100354566,100353869,100346846,100343387,100342571,100337202,100335036	Gene ID= ENSG00000140105.17 TPM= 15.93 Transcript Type= protein_coding
chr14	100334479	100375347	100334479	100375347	-	ENST00000557135.5@WARS	ENST00000557135.5	protein_coding	100375283,100374136,100369087,100361708,100360554,100354447,100353687,100346746,100343275,100342398,100337062,100334479	100375347,100374265,100369258,100361921,100360662,100354566,100353869,100346846,100343387,100342571,100337202,100335036	Gene ID= ENSG00000140105.17 TPM= 5.84 Transcript Type= protein_coding
chr14	100367992	100371465	100367992	100371465	+	transcript3836.chr14.nnic@NA	transcript3836.chr14.nnic	NA	100367992	100371465	Gene ID= novel_gene_chr14_3837 TPM= 21.02 Transcript Type= NA
chr14	100376439	100530303	100376439	100530303	+	ENST00000402312.7@WDR25	ENST00000402312.7	protein_coding	100376439,100380910,100468021,100483994,100525870,100529068,100529820	100376495,100381746,100468168,100484124,100526040,100529208,100530303	Gene ID= ENSG00000176473.13 TPM= 12.26 Transcript Type= protein_coding
chr14	100376433	100530271	100376433	100530271	+	ENST00000554998.5@WDR25	ENST00000554998.5	protein_coding	100376433,100380910,100468021,100483994,100525870,100529068,100529820	100376504,100381746,100468168,100484124,100526040,100529208,100530271	Gene ID= ENSG00000176473.13 TPM= 3.5 Transcript Type= protein_coding
chr14	100376494	100530303	100376494	100530303	+	ENST00000335290.10@WDR25	ENST00000335290.10	protein_coding	100376494,100380910,100468021,100483994,100525870,100529068,100529820	100376704,100381746,100468168,100484124,100526040,100529208,100530303	Gene ID= ENSG00000176473.13 TPM= 7.59 Transcript Type= protein_coding
chr14	100826126	100861031	100826126	100861031	+	ENST00000451743.6@MEG3	ENST00000451743.6	lincRNA	100826126,100828708,100829034,100831421,100836167,100845458,100860691	100826217,100828816,100829749,100831534,100836300,100845533,100861031	Gene ID= ENSG00000214548.14 TPM= 3.5 Transcript Type= lincRNA
chr14	101557304	101560411	101557304	101560411	-	ENST00000554735.1@DIO3OS	ENST00000554735.1	lincRNA	101557304	101560411	Gene ID= ENSG00000258498.8 TPM= 11.68 Transcript Type= lincRNA
chr14	101557304	101560375	101557304	101560375	-	ENST00000554441.5@DIO3OS	ENST00000554441.5	lincRNA	101560252,101559800,101558633,101557304	101560375,101560025,101558834,101557819	Gene ID= ENSG00000258498.8 TPM= 8.17 Transcript Type= lincRNA
chr14	101557304	101560431	101557304	101560431	-	ENST00000557661.1@DIO3OS	ENST00000557661.1	lincRNA	101560252,101559800,101557304	101560431,101560025,101558834	Gene ID= ENSG00000258498.8 TPM= 4.67 Transcript Type= lincRNA
chr14	101730437	101732522	101730437	101732522	+	ENST00000556973.1@LINC00239	ENST00000556973.1	lincRNA	101730437,101731357,101731788,101732236	101730487,101731468,101731976,101732522	Gene ID= ENSG00000258512.1 TPM= 1.17 Transcript Type= lincRNA
chr14	101761657	101927977	101761657	101927977	+	transcript3863.chr14.nic@PPP2R5C	transcript3863.chr14.nic	protein_coding	101761657,101762905,101786018,101856686,101882161,101883257,101883432,101890237,101893000,101894507,101901719,101906402,101909589,101912401,101917831,101925141	101761920,101762970,101786183,101856885,101882271,101883349,101883562,101890296,101893108,101894560,101901889,101906529,101909690,101912473,101917947,101927977	Gene ID= ENSG00000078304.19 TPM= 8.17 Transcript Type= NA
chr14	101761657	101912625	101761657	101912625	+	transcript3872.chr14.nic@PPP2R5C	transcript3872.chr14.nic	protein_coding	101761657,101762905,101786018,101856686,101882161,101883257,101883432,101890237,101893000,101894507,101901719,101906402,101909589,101912401	101761920,101762970,101786183,101856885,101882271,101883349,101883562,101890296,101893108,101894560,101901889,101906529,101909690,101912625	Gene ID= ENSG00000078304.19 TPM= 19.85 Transcript Type= NA
chr14	101761710	101837780	101761710	101837780	+	transcript3890.chr14.nic@PPP2R5C	transcript3890.chr14.nic	protein_coding	101761710,101762905,101786018,101836169	101761920,101762970,101786183,101837780	Gene ID= ENSG00000078304.19 TPM= 4.67 Transcript Type= NA
chr14	101809803	101927519	101809803	101927519	+	ENST00000350249.7@PPP2R5C	ENST00000350249.7	protein_coding	101809803,101856686,101882161,101883257,101883432,101890237,101893000,101894507,101901719,101906402,101909589,101912401,101925141	101810036,101856885,101882271,101883349,101883562,101890296,101893108,101894560,101901889,101906529,101909690,101912473,101927519	Gene ID= ENSG00000078304.19 TPM= 8.17 Transcript Type= protein_coding
chr14	101809895	101912625	101809895	101912625	+	ENST00000445439.7@PPP2R5C	ENST00000445439.7	protein_coding	101809895,101856686,101882161,101883257,101883432,101890237,101893000,101894507,101901719,101906402,101909589,101912401	101810036,101856885,101882271,101883349,101883562,101890296,101893108,101894560,101901889,101906529,101909690,101912625	Gene ID= ENSG00000078304.19 TPM= 8.17 Transcript Type= protein_coding
chr14	101809895	101927977	101809895	101927977	+	ENST00000334743.9@PPP2R5C	ENST00000334743.9	protein_coding	101809895,101856686,101882161,101883257,101883432,101890237,101893000,101894507,101901719,101906402,101909589,101912401,101917831,101925141	101810036,101856885,101882271,101883349,101883562,101890296,101893108,101894560,101901889,101906529,101909690,101912473,101917947,101927977	Gene ID= ENSG00000078304.19 TPM= 10.51 Transcript Type= protein_coding
chr14	101764803	101765378	101764803	101765378	-	transcript3904.chr14.nnic@NA	transcript3904.chr14.nnic	NA	101764803	101765378	Gene ID= novel_gene_chr14_3905 TPM= 2.34 Transcript Type= NA
chr14	101809870	101817189	101809870	101817189	-	transcript3902.chr14.nnic@NA	transcript3902.chr14.nnic	NA	101809870	101817189	Gene ID= novel_gene_chr14_3903 TPM= 3.5 Transcript Type= NA
chr14	101948347	101949425	101948347	101949425	+	ENST00000607414.1@AL118558.3	ENST00000607414.1	lincRNA	101948347	101949425	Gene ID= ENSG00000271780.1 TPM= 1.17 Transcript Type= lincRNA
chr14	101961711	101965315	101961711	101965315	-	transcript3911.chr14.nnic@NA	transcript3911.chr14.nnic	NA	101961711	101965315	Gene ID= novel_gene_chr14_3912 TPM= 2.34 Transcript Type= NA
chr14	101964528	102050791	101964528	102050791	+	ENST00000360184.8@DYNC1H1	ENST00000360184.8	protein_coding	101964528,101975712,101979319,101979719,101980364,101983019,101983382,101985687,101987453,101988703,101991527,101994184,101994673,101994986,101995181,101997035,101999989,102000286,102000954,102001145,102001535,102002537,102002792,102004518,102004762,102005042,102005888,102007008,102008178,102009843,102010276,102010740,102011875,102012314,102015105,102015856,102016349,102016766,102017088,102017383,102018451,102019893,102022751,102026574,102027174,102027383,102027619,102027937,102029539,102029819,102030162,102032272,102033065,102033269,102033976,102034325,102036489,102038460,102038698,102039001,102039412,102039638,102040236,102040598,102041574,102042013,102042228,102042384,102042635,102043875,102044274,102044595,102047817,102048516,102049440,102049714,102050071,102050435	101964947,101975799,101979492,101979974,101980550,101983290,101983609,101986763,101987632,101988852,101991673,101994324,101994849,101995096,101995300,101997274,102000144,102000399,102001064,102001354,102001681,102002703,102002965,102004683,102004950,102005236,102006170,102007108,102008337,102010086,102010459,102010952,102012113,102012470,102015332,102016086,102016489,102016999,102017294,102017504,102018616,102020056,102022880,102026707,102027288,102027544,102027833,102028141,102029712,102029938,102030282,102032467,102033182,102033484,102034188,102034452,102036642,102038606,102038848,102039254,102039546,102039732,102040410,102040673,102041734,102042124,102042288,102042507,102042748,102044045,102044491,102044698,102048028,102048669,102049582,102049882,102050198,102050791	Gene ID= ENSG00000197102.10 TPM= 293.07 Transcript Type= protein_coding
chr14	102055391	102056441	102055391	102056441	+	transcript3913.chr14.nnic@NA	transcript3913.chr14.nnic	NA	102055391	102056441	Gene ID= novel_gene_chr14_3914 TPM= 2.34 Transcript Type= NA
chr14	102081049	102139686	102081049	102139686	-	ENST00000334701.11@HSP90AA1	ENST00000334701.11	protein_coding	102139250,102101875,102086217,102085758,102085298,102084681,102084399,102083793,102083546,102083034,102082111,102081049	102139686,102102085,102086378,102086124,102085431,102084998,102084564,102083983,102083693,102083302,102082444,102081821	Gene ID= ENSG00000080824.18 TPM= 78.23 Transcript Type= protein_coding
chr14	102083113	102087043	102083113	102087043	-	transcript3920.chr14.nic@HSP90AA1	transcript3920.chr14.nic	protein_coding	102086986,102086217,102085758,102085298,102084681,102084399,102083793,102083546,102083113	102087043,102086378,102086124,102085431,102084998,102084564,102083983,102083693,102083302	Gene ID= ENSG00000080824.18 TPM= 5.84 Transcript Type= NA
chr14	102139844	102223673	102139844	102223673	+	ENST00000335263.9@WDR20	ENST00000335263.9	protein_coding	102139844,102194938,102208603,102222830	102140172,102195120,102209862,102223673	Gene ID= ENSG00000140153.17 TPM= 7.01 Transcript Type= protein_coding
chr14	102139893	102210530	102139893	102210530	+	ENST00000342702.7@WDR20	ENST00000342702.7	protein_coding	102139893,102194938,102208603	102140172,102195120,102210530	Gene ID= ENSG00000140153.17 TPM= 14.01 Transcript Type= protein_coding
chr14	102139915	102223358	102139915	102223358	+	ENST00000556094.1@WDR20	ENST00000556094.1	protein_coding	102139915,102194938,102222830	102139987,102195120,102223358	Gene ID= ENSG00000140153.17 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr14	102139893	102223671	102139893	102223671	+	ENST00000556807.1@WDR20	ENST00000556807.1	protein_coding	102139893,102208603,102222830	102140172,102209862,102223671	Gene ID= ENSG00000140153.17 TPM= 1.75 Transcript Type= protein_coding
chr14	102139911	102210525	102139911	102210525	+	ENST00000299135.6@WDR20	ENST00000299135.6	protein_coding	102139911,102193463,102208603	102140172,102193475,102210525	Gene ID= ENSG00000140153.17 TPM= 4.09 Transcript Type= protein_coding
chr14	102228839	102305176	102228839	102305176	-	ENST00000518686.5@MOK	ENST00000518686.5	protein_coding	102304962,102283478,102265823,102263546,102251917,102251756,102250812,102232535,102231707,102229457,102228839	102305176,102283592,102265912,102263616,102251995,102251804,102250990,102233789,102231821,102229657,102229366	Gene ID= ENSG00000080823.22 TPM= 1.17 Transcript Type= retained_intron
chr14	102319751	102342367	102319751	102342367	+	ENST00000442396.6@ZNF839	ENST00000442396.6	protein_coding	102319751,102325985,102331622,102334554,102335689,102338816,102339094,102341323	102320053,102326887,102331846,102334646,102335838,102338953,102339223,102342367	Gene ID= ENSG00000022976.15 TPM= 11.68 Transcript Type= protein_coding
chr14	102341102	102362916	102341102	102362916	-	ENST00000559514.5@CINP	ENST00000559514.5	protein_coding	102362845,102359419,102355768,102349919,102348279,102341102	102362916,102359587,102355897,102350048,102348759,102344389	Gene ID= ENSG00000100865.14 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr14	102348282	102362892	102348282	102362892	-	ENST00000216756.10@CINP	ENST00000216756.10	protein_coding	102362845,102359419,102355768,102349919,102348282	102362892,102359587,102355897,102350048,102348759	Gene ID= ENSG00000100865.14 TPM= 32.69 Transcript Type= protein_coding
chr14	102501760	102509791	102501760	102509791	-	ENST00000286918.8@ANKRD9	ENST00000286918.8	protein_coding	102509529,102508641,102508475,102501760	102509791,102508846,102508549,102507942	Gene ID= ENSG00000156381.8 TPM= 2.34 Transcript Type= protein_coding
chr14	102506876	102509799	102506876	102509799	-	ENST00000560748.5@ANKRD9	ENST00000560748.5	protein_coding	102509529,102508475,102506876	102509799,102508549,102507942	Gene ID= ENSG00000156381.8 TPM= 18.68 Transcript Type= protein_coding
chr14	102506842	102509773	102506842	102509773	-	transcript3980.chr14.nnic@NA	transcript3980.chr14.nnic	NA	102506842	102509773	Gene ID= novel_gene_chr14_3981 TPM= 8.17 Transcript Type= NA
chr14	102592661	102730576	102592661	102730576	+	ENST00000262241.6@RCOR1	ENST00000262241.6	protein_coding	102592661,102593266,102681895,102701278,102707351,102708465,102710935,102714423,102721007,102721320,102722187,102726468	102593187,102593325,102681978,102701330,102707512,102708583,102711013,102714617,102721084,102721377,102722416,102730576	Gene ID= ENSG00000089902.9 TPM= 36.2 Transcript Type= protein_coding
chr14	102707969	102710967	102707969	102710967	-	transcript3993.chr14.nnic@NA	transcript3993.chr14.nnic	NA	102707969	102710967	Gene ID= novel_gene_chr14_3994 TPM= 2.34 Transcript Type= NA
chr14	102732647	102734778	102732647	102734778	-	transcript3995.chr14.nnic@NA	transcript3995.chr14.nnic	NA	102732647	102734778	Gene ID= novel_gene_chr14_3996 TPM= 5.84 Transcript Type= NA
chr14	102777557	102906261	102777557	102906261	+	ENST00000392745.6@TRAF3	ENST00000392745.6	protein_coding	102777557,102830334,102870185,102871917,102875624,102876358,102886189,102889560,102891325,102897261,102903255,102905213	102777675,102830472,102870446,102871968,102875728,102876525,102886269,102889634,102891417,102897401,102903429,102906261	Gene ID= ENSG00000131323.14 TPM= 3.5 Transcript Type= protein_coding
chr14	102928082	102930841	102928082	102930841	+	transcript4011.chr14.nic@AMN	transcript4011.chr14.nic	protein_coding	102928082,102928758,102929121,102929428,102929655,102929924,102930165,102930406,102930576	102928513,102928975,102929258,102929536,102929737,102930086,102930327,102930493,102930841	Gene ID= ENSG00000166126.10 TPM= 5.84 Transcript Type= NA
chr14	102928635	102933596	102928635	102933596	+	transcript4012.chr14.nic@AMN	transcript4012.chr14.nic	protein_coding	102928635,102929428,102929655,102929924,102930165,102930406,102930576,102932604,102933013	102929258,102929536,102929737,102930086,102930327,102930493,102932414,102932744,102933596	Gene ID= ENSG00000166126.10 TPM= 4.67 Transcript Type= NA
chr14	102928634	102930841	102928634	102930841	+	transcript4014.chr14.nic@AMN	transcript4014.chr14.nic	protein_coding	102928634,102929121,102929428,102929655,102929924,102930165,102930406,102930576	102928975,102929258,102929536,102929737,102930086,102930327,102930493,102930841	Gene ID= ENSG00000166126.10 TPM= 18.68 Transcript Type= NA
chr14	102928635	102930841	102928635	102930841	+	transcript4022.chr14.nic@AMN	transcript4022.chr14.nic	protein_coding	102928635,102929428,102929655,102930165,102930406,102930576	102929258,102929536,102930086,102930327,102930493,102930841	Gene ID= ENSG00000166126.10 TPM= 2.34 Transcript Type= NA
chr14	102928680	102930841	102928680	102930841	+	transcript4026.chr14.nic@AMN	transcript4026.chr14.nic	protein_coding	102928680,102929655,102930165,102930576	102929536,102930086,102930493,102930841	Gene ID= ENSG00000166126.10 TPM= 2.34 Transcript Type= NA
chr14	102928681	102930841	102928681	102930841	+	transcript4028.chr14.nic@AMN	transcript4028.chr14.nic	protein_coding	102928681,102930576	102930493,102930841	Gene ID= ENSG00000166126.10 TPM= 3.5 Transcript Type= NA
chr14	102932379	103057462	102932379	103057462	-	ENST00000361246.6@CDC42BPB	ENST00000361246.6	protein_coding	103056999,103012097,103008472,103003928,102999565,102986487,102983556,102980773,102978126,102975883,102975684,102974016,102971919,102970151,102968472,102968253,102967046,102966282,102964502,102963061,102959631,102954602,102954198,102952498,102950466,102949765,102947721,102946468,102945662,102943891,102940227,102940046,102939830,102939610,102938306,102938104,102932379	103057462,103012188,103008555,103004023,102999713,102986580,102983756,102981021,102978205,102976049,102975803,102974149,102972161,102970261,102968716,102968358,102967170,102966387,102964650,102963155,102959710,102954688,102954275,102952603,102950602,102949904,102947802,102946684,102945724,102944487,102940324,102940130,102939947,102939727,102938411,102938174,102933843	Gene ID= ENSG00000198752.10 TPM= 24.52 Transcript Type= protein_coding
chr14	103094698	103110547	103094698	103110547	+	transcript4029.chr14.nnic@EXOC3L4	transcript4029.chr14.nnic	protein_coding	103094698,103100204,103102118,103103941,103104267,103104738,103104992,103106785,103107424,103107631,103108396,103110031	103094840,103100613,103102772,103104052,103104389,103104838,103105072,103106899,103107543,103107783,103108517,103110547	Gene ID= ENSG00000205436.7 TPM= 2.34 Transcript Type= NA
chr14	103121407	103137439	103121407	103137439	+	transcript4039.chr14.nnic@TNFAIP2	transcript4039.chr14.nnic	protein_coding	103121407,103123437,103124375,103126310,103127005,103129740,103130002,103130315,103131052,103131639,103132750,103133362,103133682,103135219,103135809	103121499,103123951,103124506,103126692,103127629,103129854,103130124,103130415,103131150,103131762,103132872,103133517,103133803,103135351,103137439	Gene ID= ENSG00000185215.8 TPM= 19.65 Transcript Type= NA
chr14	103121407	103137439	103121407	103137439	+	transcript4043.chr14.nnic@TNFAIP2	transcript4043.chr14.nnic	protein_coding	103121407,103123437,103123879,103126310,103127005,103129740,103130002,103130315,103131052,103131639,103132750,103133362,103133682,103135219	103121499,103123483,103123951,103126692,103127629,103129854,103130124,103130415,103131150,103131762,103132872,103133517,103133803,103137439	Gene ID= ENSG00000185215.8 TPM= 12.32 Transcript Type= NA
chr14	103121407	103137439	103121407	103137439	+	transcript4049.chr14.nnic@TNFAIP2	transcript4049.chr14.nnic	protein_coding	103121407,103123437,103124375,103126310,103127005,103129740,103130002,103130315,103131052,103131639,103132750,103133362,103133682,103135219	103121499,103123951,103124506,103126692,103127629,103129854,103130124,103130415,103131150,103131762,103132872,103133517,103133803,103137439	Gene ID= ENSG00000185215.8 TPM= 16.4 Transcript Type= NA
chr14	103121407	103137439	103121407	103137439	+	transcript4051.chr14.nnic@TNFAIP2	transcript4051.chr14.nnic	protein_coding	103121407,103123437,103126310,103127005,103129740,103130002,103130315,103131052,103131639,103132750,103133362,103133682,103135219,103135809	103121499,103123951,103126692,103127629,103129854,103130124,103130415,103131150,103131762,103132872,103133517,103133803,103135351,103137439	Gene ID= ENSG00000185215.8 TPM= 25.49 Transcript Type= NA
chr14	103121463	103137439	103121463	103137439	+	transcript4054.chr14.nnic@TNFAIP2	transcript4054.chr14.nnic	protein_coding	103121463,103123437,103126310,103127005,103129740,103130002,103130315,103131052,103131639,103132750,103133362,103133682,103135219,103135809	103121599,103123951,103126692,103127629,103129854,103130124,103130415,103131150,103131762,103132872,103133517,103133803,103135351,103137439	Gene ID= ENSG00000185215.8 TPM= 16.35 Transcript Type= NA
chr14	103121407	103137439	103121407	103137439	+	transcript4056.chr14.nnic@TNFAIP2	transcript4056.chr14.nnic	protein_coding	103121407,103123437,103126310,103127005,103129740,103130002,103130315,103131052,103131639,103132750,103133362,103133682,103135219	103121499,103123483,103126692,103127629,103129854,103130124,103130415,103131150,103131762,103132872,103133517,103133803,103137439	Gene ID= ENSG00000185215.8 TPM= 19.32 Transcript Type= NA
chr14	103121407	103137439	103121407	103137439	+	transcript4060.chr14.nnic@TNFAIP2	transcript4060.chr14.nnic	protein_coding	103121407,103123437,103126310,103127005,103129740,103130002,103130315,103131052,103131639,103132750,103133362,103133682,103135219	103121499,103123951,103126692,103127629,103129854,103130124,103130415,103131150,103131762,103132872,103133517,103133803,103137439	Gene ID= ENSG00000185215.8 TPM= 41.31 Transcript Type= NA
chr14	103121463	103137439	103121463	103137439	+	transcript4061.chr14.nnic@TNFAIP2	transcript4061.chr14.nnic	protein_coding	103121463,103123437,103126310,103127005,103129740,103130002,103130315,103131052,103131639,103132750,103133362,103133682,103135219	103121599,103123951,103126692,103127629,103129854,103130124,103130415,103131150,103131762,103132872,103133517,103133803,103137439	Gene ID= ENSG00000185215.8 TPM= 13.49 Transcript Type= NA
chr14	103123461	103137439	103123461	103137439	+	ENST00000560869.5@TNFAIP2	ENST00000560869.5	protein_coding	103123461,103126310,103127005,103129740,103130002,103130315,103131052,103131639,103132750,103133362,103133682,103135219	103123951,103126692,103127629,103129854,103130124,103130415,103131150,103131762,103132872,103133517,103133803,103137439	Gene ID= ENSG00000185215.8 TPM= 33.33 Transcript Type= protein_coding
chr14	103334002	103345025	103334002	103345025	+	ENST00000216554.7@EIF5	ENST00000216554.7	protein_coding	103334002,103334389,103335653,103336036,103336677,103337116,103338327,103338735,103339172,103339639,103340427,103340963	103334260,103334597,103335932,103336117,103336849,103337227,103338472,103338893,103339333,103339803,103340561,103345025	Gene ID= ENSG00000100664.10 TPM= 81.9 Transcript Type= protein_coding
chr14	103385374	103503827	103385374	103503827	+	transcript4110.chr14.nic@MARK3	transcript4110.chr14.nic	protein_coding	103385374,103405076,103428387,103448919,103451918,103457142,103462405,103465557,103465972,103466343,103467079,103468081,103474993,103480387,103491777,103498502,103500156,103502882	103386080,103405267,103428440,103448967,103451983,103457212,103462461,103465793,103466091,103466442,103467191,103468186,103475210,103480490,103492034,103498528,103500200,103503827	Gene ID= ENSG00000075413.17 TPM= 10.74 Transcript Type= NA
chr14	103385374	103503831	103385374	103503831	+	transcript4117.chr14.nic@MARK3	transcript4117.chr14.nic	protein_coding	103385374,103405076,103428387,103448919,103451918,103457142,103462405,103465557,103465972,103466343,103467079,103468033,103474993,103480387,103491777,103498502,103502882	103386080,103405267,103428440,103448967,103451983,103457212,103462461,103465793,103466091,103466442,103467191,103468186,103475210,103480490,103492034,103498528,103503831	Gene ID= ENSG00000075413.17 TPM= 8.17 Transcript Type= NA
chr14	103385374	103503831	103385374	103503831	+	transcript4122.chr14.nic@MARK3	transcript4122.chr14.nic	protein_coding	103385374,103405076,103428387,103448919,103451918,103457142,103462405,103465557,103465972,103466343,103467079,103468081,103474993,103480387,103491777,103498502,103502882	103386080,103405267,103428440,103448967,103451983,103457212,103462461,103465793,103466091,103466442,103467191,103468186,103475210,103480490,103492034,103498528,103503831	Gene ID= ENSG00000075413.17 TPM= 6.07 Transcript Type= NA
chr14	103385374	103467685	103385374	103467685	+	transcript4149.chr14.nic@MARK3	transcript4149.chr14.nic	protein_coding	103385374,103405076,103428387,103448919,103451918,103457142,103462405,103465557,103465972,103466343,103467079	103386080,103405267,103428440,103448967,103451983,103457212,103462461,103465793,103466091,103466442,103467685	Gene ID= ENSG00000075413.17 TPM= 11.09 Transcript Type= NA
chr14	103385392	103503252	103385392	103503252	+	ENST00000440884.7@MARK3	ENST00000440884.7	protein_coding	103385392,103405076,103428387,103448919,103451918,103457142,103462405,103465972,103466343,103467079,103468033,103474993,103480387,103491777,103498502,103502882	103386080,103405267,103428440,103448967,103451983,103457212,103462461,103466091,103466442,103467191,103468186,103475210,103480490,103492034,103498528,103503252	Gene ID= ENSG00000075413.17 TPM= 7.01 Transcript Type= protein_coding
chr14	103385453	103503360	103385453	103503360	+	ENST00000416682.6@MARK3	ENST00000416682.6	protein_coding	103385453,103405076,103428387,103448919,103451918,103457142,103458727,103462405,103465557,103465972,103466343,103467079,103468033,103474993,103480387,103491777,103502882	103386080,103405267,103428440,103448967,103451983,103457212,103458795,103462461,103465793,103466091,103466442,103467191,103468186,103475210,103480490,103492034,103503360	Gene ID= ENSG00000075413.17 TPM= 3.5 Transcript Type= protein_coding
chr14	103385541	103503831	103385541	103503831	+	ENST00000303622.13@MARK3	ENST00000303622.13	protein_coding	103385541,103405076,103428387,103448919,103451918,103457142,103462405,103465557,103465972,103466343,103467079,103468033,103474993,103480387,103491777,103502882	103386080,103405267,103428440,103448967,103451983,103457212,103462461,103465793,103466091,103466442,103467191,103468186,103475210,103480490,103492034,103503831	Gene ID= ENSG00000075413.17 TPM= 1.17 Transcript Type= protein_coding
chr14	103433633	103435360	103433633	103435360	-	transcript4177.chr14.nnic@NA	transcript4177.chr14.nnic	NA	103433633	103435360	Gene ID= novel_gene_chr14_4178 TPM= 2.34 Transcript Type= NA
chr14	103452473	103456201	103452473	103456201	-	transcript4175.chr14.nnic@NA	transcript4175.chr14.nnic	NA	103452473	103456201	Gene ID= novel_gene_chr14_4176 TPM= 17.51 Transcript Type= NA
chr14	103519668	103522832	103519668	103522832	-	transcript4155.chr14.nic@CKB	transcript4155.chr14.nic	protein_coding	103522766,103522301,103521818,103521263,103520469,103520122,103519668	103522832,103522505,103522177,103521434,103520592,103520311,103520042	Gene ID= ENSG00000166165.12 TPM= 68.69 Transcript Type= NA
chr14	103519668	103522833	103519668	103522833	-	transcript4161.chr14.nic@CKB	transcript4161.chr14.nic	protein_coding	103522766,103522301,103520469,103520122,103519668	103522833,103522505,103522177,103520311,103520042	Gene ID= ENSG00000166165.12 TPM= 18.1 Transcript Type= NA
chr14	103519679	103521443	103519679	103521443	-	ENST00000554282.5@CKB	ENST00000554282.5	protein_coding	103521263,103520122,103519679	103521443,103520311,103520042	Gene ID= ENSG00000166165.12 TPM= 3.5 Transcript Type= retained_intron
chr14	103525010	103529072	103525010	103529072	-	ENST00000568177.1@AL133367.1	ENST00000568177.1	antisense_RNA	103525010	103529072	Gene ID= ENSG00000260285.1 TPM= 3.5 Transcript Type= antisense_RNA
chr14	103529185	103536045	103529185	103536045	+	transcript4183.chr14.nnic@TRMT61A	transcript4183.chr14.nnic	protein_coding	103529185,103530150,103532582,103534550	103529261,103530309,103532848,103536045	Gene ID= ENSG00000166166.12 TPM= 19.85 Transcript Type= NA
chr14	103527632	103536045	103527632	103536045	+	transcript4184.chr14.nic@TRMT61A	transcript4184.chr14.nic	protein_coding	103527632,103532582,103534550	103530309,103532848,103536045	Gene ID= ENSG00000166166.12 TPM= 4.67 Transcript Type= NA
chr14	103529184	103537073	103529184	103537073	+	ENST00000389749.8@TRMT61A	ENST00000389749.8	protein_coding	103529184,103529950,103532582,103534550	103529261,103530309,103532848,103537073	Gene ID= ENSG00000166166.12 TPM= 8.17 Transcript Type= protein_coding
chr14	103540317	103544389	103540317	103544389	-	transcript4185.chr14.nnic@NA	transcript4185.chr14.nnic	NA	103540317	103544389	Gene ID= novel_gene_chr14_4186 TPM= 4.67 Transcript Type= NA
chr14	103559619	103562298	103559619	103562298	-	ENST00000337322.4@BAG5	ENST00000337322.4	protein_coding	103561913,103559619	103562298,103561192	Gene ID= ENSG00000166170.9 TPM= 1.17 Transcript Type= protein_coding
chr14	103562965	103590527	103562965	103590527	+	transcript4187.chr14.nic@APOPT1	transcript4187.chr14.nic	protein_coding	103562965,103571623,103574107,103579371,103587274,103590181	103563124,103571820,103574170,103579491,103587364,103590527	Gene ID= ENSG00000256053.7 TPM= 3.5 Transcript Type= NA
chr14	103563173	103590526	103563173	103590526	+	ENST00000477116.5@APOPT1	ENST00000477116.5	protein_coding	103563173,103571623,103574107,103587274,103590181	103563379,103571820,103574170,103587364,103590526	Gene ID= ENSG00000256053.7 TPM= 1.17 Transcript Type= protein_coding
chr14	103562965	103590504	103562965	103590504	+	ENST00000440963.1@APOPT1	ENST00000440963.1	protein_coding	103562965,103587274,103590181	103563124,103587364,103590504	Gene ID= ENSG00000256053.7 TPM= 2.34 Transcript Type= protein_coding
chr14	103629170	103701544	103629170	103701544	+	transcript4217.chr14.nic@KLC1	transcript4217.chr14.nic	protein_coding	103629170,103654564,103657546,103662116,103662702,103669511,103670182,103673014,103673332,103675552,103675689,103677415,103679309,103687081,103700655,103701201	103629494,103654825,103657776,103662194,103662927,103669598,103670283,103673187,103673431,103675601,103675756,103677523,103679518,103687211,103700727,103701544	Gene ID= ENSG00000126214.21 TPM= 4.18 Transcript Type= NA
chr14	103629170	103701544	103629170	103701544	+	transcript4222.chr14.nnic@KLC1	transcript4222.chr14.nnic	protein_coding	103629170,103654564,103657546,103662116,103662702,103669511,103670182,103673014,103673332,103675552,103675689,103677415,103679408,103687081,103700655,103701201	103629494,103654825,103657776,103662194,103662927,103669598,103670283,103673187,103673431,103675601,103675756,103677523,103679545,103687211,103700727,103701544	Gene ID= ENSG00000126214.21 TPM= 4.18 Transcript Type= NA
chr14	103683680	103701544	103683680	103701544	+	transcript4254.chr14.nic@KLC1	transcript4254.chr14.nic	protein_coding	103683680,103692359,103700655,103701201	103687211,103692425,103700727,103701544	Gene ID= ENSG00000126214.21 TPM= 3.5 Transcript Type= NA
chr14	103629237	103701514	103629237	103701514	+	ENST00000555836.5@KLC1	ENST00000555836.5	protein_coding	103629237,103654564,103657546,103662116,103662702,103669511,103670182,103673014,103673332,103675552,103675689,103677415,103679384,103687081,103692359,103700655,103701201	103629494,103654825,103657776,103662194,103662927,103669598,103670283,103673187,103673431,103675601,103675756,103677523,103679518,103687211,103692425,103700727,103701514	Gene ID= ENSG00000126214.21 TPM= 3.5 Transcript Type= protein_coding
chr14	103629237	103701544	103629237	103701544	+	ENST00000334553.10@KLC1	ENST00000334553.10	protein_coding	103629237,103654564,103657546,103662116,103662702,103669511,103670182,103673014,103673332,103675552,103675689,103677415,103679384,103687081,103692359,103700655,103701201	103629494,103654825,103657776,103662194,103662927,103669598,103670283,103673187,103673431,103675601,103675756,103677523,103679545,103687211,103692425,103700727,103701544	Gene ID= ENSG00000126214.21 TPM= 7.01 Transcript Type= protein_coding
chr14	103629241	103701544	103629241	103701544	+	ENST00000452929.6@KLC1	ENST00000452929.6	protein_coding	103629241,103654564,103657546,103662116,103662702,103669511,103670182,103673014,103673332,103675552,103675689,103677415,103679384,103687081,103700655,103701201	103629494,103654825,103657776,103662194,103662927,103669598,103670283,103673187,103673431,103675601,103675756,103677523,103679545,103687211,103700727,103701544	Gene ID= ENSG00000126214.21 TPM= 14.3 Transcript Type= protein_coding
chr14	103629241	103701514	103629241	103701514	+	ENST00000557450.5@KLC1	ENST00000557450.5	protein_coding	103629241,103654564,103657546,103662116,103662702,103669511,103670182,103673014,103673332,103675552,103675689,103677415,103679384,103700655,103701201	103629494,103654825,103657776,103662194,103662927,103669598,103670283,103673187,103673431,103675601,103675756,103677523,103679518,103700727,103701514	Gene ID= ENSG00000126214.21 TPM= 18.68 Transcript Type= protein_coding
chr14	103629241	103701544	103629241	103701544	+	ENST00000554280.5@KLC1	ENST00000554280.5	protein_coding	103629241,103654564,103657546,103662116,103662702,103669511,103670182,103673014,103673332,103675552,103675689,103677415,103679384,103687081,103700655,103701201	103629494,103654825,103657776,103662194,103662927,103669598,103670283,103673187,103673431,103675601,103675756,103677523,103679518,103687211,103700727,103701544	Gene ID= ENSG00000126214.21 TPM= 9.63 Transcript Type= protein_coding
chr14	103629177	103714249	103629177	103714249	+	ENST00000348520.10@KLC1	ENST00000348520.10	protein_coding	103629177,103654564,103657546,103662116,103662702,103669511,103670182,103673014,103673332,103675552,103675689,103677415,103679384,103700655,103701201	103629494,103654825,103657776,103662194,103662927,103669598,103670283,103673187,103673431,103675601,103675756,103677523,103679545,103700727,103714249	Gene ID= ENSG00000126214.21 TPM= 7.39 Transcript Type= protein_coding
chr14	103629237	103686211	103629237	103686211	+	ENST00000553286.5@KLC1	ENST00000553286.5	protein_coding	103629237,103654564,103657546,103662116,103662702,103669511,103670182,103673014,103673332,103675552,103675689,103677415,103679384,103684986	103629494,103654825,103657776,103662194,103662927,103669598,103670283,103673187,103673431,103675601,103675756,103677523,103679545,103686211	Gene ID= ENSG00000126214.21 TPM= 1.17 Transcript Type= protein_coding
chr14	103699922	103701544	103699922	103701544	+	ENST00000556986.1@KLC1	ENST00000556986.1	protein_coding	103699922,103701201	103700727,103701544	Gene ID= ENSG00000126214.21 TPM= 14.01 Transcript Type= retained_intron
chr14	103688341	103690192	103688341	103690192	+	transcript4263.chr14.nnic@NA	transcript4263.chr14.nnic	NA	103688341	103690192	Gene ID= novel_gene_chr14_4264 TPM= 2.34 Transcript Type= NA
chr14	103694252	103697352	103694252	103697352	-	transcript4267.chr14.nnic@NA	transcript4267.chr14.nnic	NA	103694252	103697352	Gene ID= novel_gene_chr14_4268 TPM= 26.85 Transcript Type= NA
chr14	103696353	103697163	103696353	103697163	+	ENST00000602422.1@AL049840.4	ENST00000602422.1	sense_intronic	103696353	103697163	Gene ID= ENSG00000269958.1 TPM= 2.34 Transcript Type= sense_intronic
chr14	103697618	103715469	103697618	103715469	-	ENST00000555055.5@XRCC3	ENST00000555055.5	protein_coding	103715424,103712875,103711466,103711033,103708522,103707003,103703173,103699364,103699133,103697618	103715469,103712931,103711567,103711245,103708659,103707215,103703327,103699576,103699179,103699017	Gene ID= ENSG00000126215.13 TPM= 2.72 Transcript Type= protein_coding
chr14	103697617	103714489	103697617	103714489	-	transcript4236.chr14.nic@XRCC3	transcript4236.chr14.nic	protein_coding	103712875,103711466,103711033,103708522,103707003,103703173,103699364,103699133,103697617	103714489,103711567,103711245,103708659,103707215,103703327,103699576,103699179,103699017	Gene ID= ENSG00000126215.13 TPM= 4.47 Transcript Type= NA
chr14	103697617	103715504	103697617	103715504	-	ENST00000352127.11@XRCC3	ENST00000352127.11	protein_coding	103715424,103711466,103711033,103708522,103707003,103703173,103699364,103699133,103697617	103715504,103711567,103711245,103708659,103707215,103703327,103699576,103699179,103699017	Gene ID= ENSG00000126215.13 TPM= 3.3 Transcript Type= protein_coding
chr14	103699515	103701543	103699515	103701543	+	transcript4261.chr14.nnic@NA	transcript4261.chr14.nnic	NA	103699515	103701543	Gene ID= novel_gene_chr14_4262 TPM= 7.01 Transcript Type= NA
chr14	103715730	103733668	103715730	103733668	+	ENST00000216602.10@ZFYVE21	ENST00000216602.10	protein_coding	103715730,103726792,103727746,103728908,103729091,103729793,103732620,103732983	103715979,103726842,103727914,103728983,103729182,103729846,103732762,103733668	Gene ID= ENSG00000100711.13 TPM= 4.09 Transcript Type= protein_coding
chr14	103715808	103733662	103715808	103733662	+	ENST00000311141.6@ZFYVE21	ENST00000311141.6	protein_coding	103715808,103726792,103727746,103728908,103729091,103732620,103732983	103715979,103726842,103727914,103728983,103729182,103732762,103733662	Gene ID= ENSG00000100711.13 TPM= 191.49 Transcript Type= protein_coding
chr14	103754562	103754852	103754562	103754852	+	transcript4265.chr14.nnic@NA	transcript4265.chr14.nnic	NA	103754562	103754852	Gene ID= novel_gene_chr14_4266 TPM= 2.34 Transcript Type= NA
chr14	103912288	103921557	103912288	103921557	-	ENST00000286953.7@C14orf2	ENST00000286953.7	protein_coding	103921470,103915066,103913961,103912288	103921557,103915189,103913984,103912694	Gene ID= ENSG00000156411.9 TPM= 21.6 Transcript Type= protein_coding
chr14	103912300	103921520	103912300	103921520	-	ENST00000555030.5@C14orf2	ENST00000555030.5	protein_coding	103921470,103915066,103914479,103913961,103912300	103921520,103915189,103914633,103913984,103912694	Gene ID= ENSG00000156411.9 TPM= 5.25 Transcript Type= protein_coding
chr14	103928462	104052667	103928462	104052667	+	ENST00000409874.8@TDRD9	ENST00000409874.8	protein_coding	103928462,103955664,103963079,103965333,103966709,103970541,103975389,103986217,103991160,103994332,103994519,103995750,103998624,104004238,104005274,104006389,104006646,104006782,104007160,104008413,104014725,104015981,104018092,104022157,104024569,104025564,104026047,104026679,104031108,104032017,104033960,104034960,104040196,104042069,104049608,104051981	103928724,103955770,103963176,103965554,103966831,103970621,103975553,103986320,103991224,103994386,103994603,103995807,103998728,104004335,104005405,104006554,104006709,104006845,104007204,104008466,104014841,104016088,104018192,104022330,104024680,104025776,104026136,104026939,104031263,104032087,104034069,104035056,104040334,104042187,104049680,104052667	Gene ID= ENSG00000156414.18 TPM= 3.5 Transcript Type= protein_coding
chr14	104139040	104180894	104139040	104180894	+	ENST00000315264.7@KIF26A	ENST00000315264.7	protein_coding	104139040,104152015,104157755,104166859,104171723,104172575,104172977,104173330,104173706,104174148,104174982,104178550,104179236,104179609	104139288,104152461,104157942,104167048,104171935,104172668,104173239,104173513,104173868,104174310,104177898,104178755,104179386,104180894	Gene ID= ENSG00000066735.14 TPM= 26.85 Transcript Type= protein_coding
chr14	104701876	104704809	104701876	104704809	+	transcript4297.chr14.nic@INF2	transcript4297.chr14.nic	protein_coding	104701876,104703295,104703916	104703220,104703454,104704809	Gene ID= ENSG00000203485.12 TPM= 2.34 Transcript Type= NA
chr14	104689621	104704809	104689621	104704809	+	ENST00000398337.8@INF2	ENST00000398337.8	protein_coding	104689621,104701357,104703105,104703295,104703916	104689739,104701756,104703220,104703454,104704809	Gene ID= ENSG00000203485.12 TPM= 8.17 Transcript Type= protein_coding
chr14	104689637	104719603	104689637	104719603	+	ENST00000392634.8@INF2	ENST00000392634.8	protein_coding	104689637,104701357,104703105,104703295,104703916,104706035,104706910,104707253,104708436,104708671,104709281,104709620,104710088,104710937,104711079,104711629,104712433,104712828,104713207,104713445,104714203,104715284,104718795	104689739,104701756,104703220,104703454,104703949,104706176,104707051,104708002,104708587,104708732,104709383,104709705,104710188,104711007,104711186,104711699,104712553,104712992,104713309,104713606,104714856,104715340,104719603	Gene ID= ENSG00000203485.12 TPM= 117.93 Transcript Type= protein_coding
chr14	104689606	104722535	104689606	104722535	+	ENST00000330634.11@INF2	ENST00000330634.11	protein_coding	104689606,104701357,104703105,104703295,104703916,104706035,104706910,104707253,104708436,104708671,104709281,104709620,104710088,104710937,104711079,104711629,104712433,104712828,104713207,104713445,104714203,104718795	104689739,104701756,104703220,104703454,104703949,104706176,104707051,104708002,104708587,104708732,104709383,104709705,104710188,104711007,104711186,104711699,104712553,104712992,104713309,104713606,104714856,104722535	Gene ID= ENSG00000203485.12 TPM= 5.84 Transcript Type= protein_coding
chr14	104707759	104715324	104707759	104715324	+	transcript4304.chr14.nic@INF2	transcript4304.chr14.nic	protein_coding	104707759,104708436,104708671,104709281,104709620,104710088,104710937,104711079,104711629,104712433,104712828,104713207,104713445,104714203	104708002,104708587,104708732,104709383,104709705,104710188,104711007,104711186,104711699,104712553,104712992,104713309,104713606,104715324	Gene ID= ENSG00000203485.12 TPM= 5.84 Transcript Type= NA
chr14	104716391	104719605	104716391	104719605	+	transcript4310.chr14.nnic@NA	transcript4310.chr14.nnic	NA	104716391	104719605	Gene ID= novel_gene_chr14_4311 TPM= 24.52 Transcript Type= NA
chr14	104724186	104747310	104724186	104747310	+	ENST00000330877.6@ADSSL1	ENST00000330877.6	protein_coding	104724186,104735020,104738376,104739328,104739750,104740601,104740839,104741117,104741848,104743067,104744812,104746236,104746951	104724462,104735122,104738438,104739378,104739816,104740708,104740920,104741243,104742002,104743191,104744909,104746385,104747310	Gene ID= ENSG00000185100.10 TPM= 2.34 Transcript Type= protein_coding
chr14	104753131	104759651	104753131	104759651	+	transcript4386.chr14.nnic@SIVA1	transcript4386.chr14.nnic	protein_coding	104753131,104755630,104756604,104759219	104753319,104755824,104756760,104759651	Gene ID= ENSG00000184990.12 TPM= 5.84 Transcript Type= NA
chr14	104753100	104759657	104753100	104759657	+	ENST00000329967.10@SIVA1	ENST00000329967.10	protein_coding	104753100,104755630,104756604,104759428	104753319,104755824,104756760,104759657	Gene ID= ENSG00000184990.12 TPM= 70.06 Transcript Type= protein_coding
chr14	104753159	104759659	104753159	104759659	+	ENST00000347067.9@SIVA1	ENST00000347067.9	protein_coding	104753159,104756604,104759428	104753319,104756760,104759659	Gene ID= ENSG00000184990.12 TPM= 2.34 Transcript Type= protein_coding
chr14	104769349	104795853	104769349	104795853	-	transcript4327.chr14.nic@AKT1	transcript4327.chr14.nic	protein_coding	104795484,104793127,104792598,104780088,104776659,104775652,104775076,104774938,104773912,104773455,104773251,104772878,104772365,104770745,104769349	104795853,104793304,104792722,104780216,104776770,104775799,104775207,104775003,104773980,104773580,104773379,104773092,104772452,104770847,104770420	Gene ID= ENSG00000142208.15 TPM= 112.19 Transcript Type= NA
chr14	104769349	104795751	104769349	104795751	-	ENST00000349310.7@AKT1	ENST00000349310.7	protein_coding	104795484,104793127,104792598,104780088,104776659,104775652,104775076,104774938,104773912,104773455,104773251,104772878,104772365,104770745,104769349	104795751,104793210,104792722,104780216,104776770,104775799,104775207,104775003,104773980,104773580,104773379,104773092,104772452,104770847,104770420	Gene ID= ENSG00000142208.15 TPM= 46.41 Transcript Type= protein_coding
chr14	104769349	104795679	104769349	104795679	-	ENST00000407796.6@AKT1	ENST00000407796.6	protein_coding	104795484,104792598,104780088,104776659,104775652,104775076,104774938,104773912,104773455,104773251,104772878,104772365,104770745,104769349	104795679,104792722,104780216,104776770,104775799,104775207,104775003,104773980,104773580,104773379,104773092,104772452,104770847,104770420	Gene ID= ENSG00000142208.15 TPM= 286.94 Transcript Type= protein_coding
chr14	104800532	104804712	104800532	104804712	+	transcript4393.chr14.nnic@ZBTB42	transcript4393.chr14.nnic	protein_coding	104800532,104801359	104800700,104804712	Gene ID= ENSG00000179627.9 TPM= 2.34 Transcript Type= NA
chr14	104800913	104804712	104800913	104804712	+	ENST00000342537.7@ZBTB42	ENST00000342537.7	protein_coding	104800913	104804712	Gene ID= ENSG00000179627.9 TPM= 17.51 Transcript Type= protein_coding
chr14	104821201	104823718	104821201	104823718	+	ENST00000555578.1@LINC00638	ENST00000555578.1	lincRNA	104821201	104823718	Gene ID= ENSG00000258701.1 TPM= 2.34 Transcript Type= lincRNA
chr14	104865313	104896770	104865313	104896770	+	ENST00000414716.7@CEP170B	ENST00000414716.7	protein_coding	104865313,104868424,104876256,104877885,104878443,104880287,104882728,104883035,104883831,104885369,104886040,104886275,104889620,104892976,104893523,104893761,104894285,104894537,104894711	104865513,104868555,104876345,104877963,104878501,104880425,104882832,104883508,104884549,104885542,104886130,104887978,104889758,104893135,104893666,104893849,104894378,104894588,104896770	Gene ID= ENSG00000099814.15 TPM= 52.54 Transcript Type= protein_coding
chr14	104924823	104937790	104924823	104937790	+	ENST00000392593.8@PLD4	ENST00000392593.8	protein_coding	104924823,104927141,104927673,104928749,104929307,104929978,104930742,104931748,104932012,104932259,104932765	104924990,104927230,104927866,104928932,104929427,104930105,104930942,104931887,104932177,104932355,104937790	Gene ID= ENSG00000166428.12 TPM= 5.84 Transcript Type= protein_coding
chr14	104985793	104995512	104985793	104995512	+	ENST00000547315.5@C14orf79	ENST00000547315.5	protein_coding	104985793,104988943,104991491,104992948,104994598	104986854,104989088,104991620,104993064,104995512	Gene ID= ENSG00000140104.13 TPM= 16.35 Transcript Type= protein_coding
chr14	105009573	105021148	105009573	105021148	-	ENST00000336219.3@CDCA4	ENST00000336219.3	protein_coding	105020999,105009573	105021148,105011935	Gene ID= ENSG00000170779.10 TPM= 12.84 Transcript Type= protein_coding
chr14	105049389	105065430	105049389	105065430	-	ENST00000329797.7@GPR132	ENST00000329797.7	protein_coding	105065379,105057167,105055387,105049389	105065430,105057280,105056166,105052102	Gene ID= ENSG00000183484.11 TPM= 7.59 Transcript Type= protein_coding
chr14	105049397	105065445	105049397	105065445	-	ENST00000392585.2@GPR132	ENST00000392585.2	protein_coding	105065379,105057167,105049397	105065445,105057280,105052102	Gene ID= ENSG00000183484.11 TPM= 8.76 Transcript Type= protein_coding
chr14	105093271	105095701	105093271	105095701	+	transcript4415.chr14.nnic@NA	transcript4415.chr14.nnic	NA	105093271	105095701	Gene ID= novel_gene_chr14_4416 TPM= 2.34 Transcript Type= NA
chr14	105141755	105168769	105141755	105168769	-	transcript4424.chr14.nic@JAG2	transcript4424.chr14.nic	protein_coding	105168355,105167757,105157706,105155738,105155562,105152161,105151938,105151283,105150991,105150865,105150604,105149170,105148937,105148745,105148326,105148116,105147772,105147500,105147326,105146611,105146385,105145731,105144930,105143482,105141755	105168769,105168107,105157763,105155989,105155622,105152291,105152057,105151739,105151104,105150911,105150777,105149320,105149089,105148858,105148439,105148229,105147888,105147527,105147411,105146724,105146500,105145973,105145061,105143638,105143170	Gene ID= ENSG00000184916.8 TPM= 8.96 Transcript Type= NA
chr14	105141755	105168769	105141755	105168769	-	transcript4429.chr14.nic@JAG2	transcript4429.chr14.nic	protein_coding	105168355,105167757,105157706,105155738,105155562,105152161,105151938,105151283,105150865,105150604,105149170,105148937,105148745,105148326,105148116,105147772,105147500,105147326,105146611,105146385,105145731,105144930,105143482,105141755	105168769,105168107,105157763,105155989,105155622,105152291,105152057,105151739,105150911,105150777,105149320,105149089,105148858,105148439,105148229,105147888,105147527,105147411,105146724,105146500,105145973,105145061,105143638,105143170	Gene ID= ENSG00000184916.8 TPM= 7.79 Transcript Type= NA
chr14	105141740	105146119	105141740	105146119	-	transcript4434.chr14.nnic@NA	transcript4434.chr14.nnic	NA	105141740	105146119	Gene ID= novel_gene_chr14_4435 TPM= 4.29 Transcript Type= NA
chr14	105172939	105181332	105172939	105181332	-	transcript4438.chr14.nic@NUDT14	transcript4438.chr14.nic	protein_coding	105181129,105177692,105176963,105176534,105172939	105181332,105177735,105176991,105176771,105173261	Gene ID= ENSG00000183828.14 TPM= 3.5 Transcript Type= NA
chr14	105172939	105181303	105172939	105181303	-	ENST00000392568.6@NUDT14	ENST00000392568.6	protein_coding	105181129,105177692,105176963,105176534,105172939	105181303,105177735,105177027,105176771,105173261	Gene ID= ENSG00000183828.14 TPM= 30.36 Transcript Type= protein_coding
chr14	105209286	105300688	105209286	105300688	-	ENST00000547530.6@BRF1	ENST00000547530.6	protein_coding	105300446,105286296,105272721,105256518,105252507,105241265,105228820,105226634,105226251,105226069,105221648,105220069,105219151,105218998,105217544,105212113,105211122,105209286	105300688,105286376,105272894,105256549,105252579,105241414,105228913,105226760,105226290,105226161,105221914,105220130,105219232,105219053,105217800,105212164,105211293,105210588	Gene ID= ENSG00000185024.16 TPM= 18.68 Transcript Type= protein_coding
chr14	105248626	105251093	105248626	105251093	+	ENST00000463376.6@BTBD6	ENST00000463376.6	protein_coding	105248626,105249360,105249640	105249247,105249478,105251093	Gene ID= ENSG00000184887.13 TPM= 34.83 Transcript Type= protein_coding
chr14	105248574	105251093	105248574	105251093	+	ENST00000392554.7@BTBD6	ENST00000392554.7	protein_coding	105248574,105249157,105249360,105249640	105249085,105249247,105249478,105251093	Gene ID= ENSG00000184887.13 TPM= 193.04 Transcript Type= protein_coding
chr14	105314415	105395206	105314415	105395206	+	ENST00000325438.12@PACS2	ENST00000325438.12	protein_coding	105314415,105348493,105352378,105355052,105367213,105368074,105368459,105369841,105376768,105379739,105380080,105380957,105381914,105382477,105382807,105383359,105384353,105384879,105389961,105391207,105391631,105392619,105393222,105394554	105315037,105348580,105352467,105355177,105367375,105368147,105368539,105369900,105376925,105379829,105380154,105381099,105382046,105382581,105382913,105383513,105384463,105384987,105390003,105391249,105391766,105392845,105393335,105395206	Gene ID= ENSG00000179364.13 TPM= 143.91 Transcript Type= protein_coding
chr14	105314702	105395206	105314702	105395206	+	transcript4471.chr14.nic@PACS2	transcript4471.chr14.nic	protein_coding	105314702,105348493,105352378,105355052,105367213,105368074,105368459,105369841,105376768,105379739,105380080,105380957,105381914,105382477,105382807,105383359,105384353,105384879,105389961,105391207,105391631,105392761,105393222,105394554	105315037,105348580,105352467,105355177,105367375,105368147,105368539,105369900,105376925,105379829,105380154,105381099,105382046,105382581,105382913,105383513,105384463,105384987,105390003,105391249,105391766,105392845,105393335,105395206	Gene ID= ENSG00000179364.13 TPM= 10.8 Transcript Type= NA
chr14	105419822	105470729	105419822	105470729	+	ENST00000331320.11@MTA1	ENST00000331320.11	protein_coding	105419822,105438672,105445418,105449359,105450058,105450261,105454193,105458270,105460358,105460765,105463184,105463493,105464032,105464416,105464674,105465094,105466426,105466707,105469467,105469841,105470065	105420063,105438739,105445511,105449409,105450184,105450324,105454310,105458372,105460457,105460953,105463258,105463551,105464147,105464567,105464863,105465183,105466578,105466742,105469498,105469992,105470729	Gene ID= ENSG00000182979.17 TPM= 42.03 Transcript Type= protein_coding
chr14	105469262	105470723	105469262	105470723	+	transcript4526.chr14.nnic@NA	transcript4526.chr14.nnic	NA	105469262	105470723	Gene ID= novel_gene_chr14_4527 TPM= 15.18 Transcript Type= NA
chr14	105474150	105480170	105474150	105480170	+	ENST00000329146.8@CRIP2	ENST00000329146.8	protein_coding	105474150,105478266,105478450,105478731,105478979,105479125,105479436,105479586	105474905,105478360,105478507,105478871,105479047,105479219,105479493,105480170	Gene ID= ENSG00000182809.10 TPM= 500.26 Transcript Type= protein_coding
chr14	105474832	105480152	105474832	105480152	+	ENST00000547643.5@CRIP2	ENST00000547643.5	protein_coding	105474832,105478266,105478450,105478731,105478979,105479125,105479586	105474905,105478360,105478507,105478871,105479047,105479493,105480152	Gene ID= ENSG00000182809.10 TPM= 20.19 Transcript Type= retained_intron
chr14	105474837	105480160	105474837	105480160	+	ENST00000552643.5@CRIP2	ENST00000552643.5	protein_coding	105474837,105478266,105478450,105478979,105479125,105479436,105479586	105474905,105478360,105478871,105479047,105479219,105479493,105480160	Gene ID= ENSG00000182809.10 TPM= 12.2 Transcript Type= retained_intron
chr14	105486317	105488791	105486317	105488791	+	ENST00000330233.11@CRIP1	ENST00000330233.11	protein_coding	105486317,105488166,105488331,105488471,105488663	105487299,105488260,105488388,105488516,105488791	Gene ID= ENSG00000213145.9 TPM= 34.44 Transcript Type= protein_coding
chr14	105486317	105488785	105486317	105488785	+	ENST00000496700.5@CRIP1	ENST00000496700.5	protein_coding	105486317,105488471,105488663	105488388,105488516,105488785	Gene ID= ENSG00000213145.9 TPM= 3.5 Transcript Type= retained_intron
chr14	105487854	105488789	105487854	105488789	+	ENST00000461556.1@CRIP1	ENST00000461556.1	protein_coding	105487854,105488331,105488471,105488663	105488260,105488388,105488516,105488789	Gene ID= ENSG00000213145.9 TPM= 32.11 Transcript Type= retained_intron
chr14	105491255	105499182	105491255	105499182	+	ENST00000392523.8@C14orf80	ENST00000392523.8	protein_coding	105491255,105491622,105492107,105492579,105493835,105495880,105497357,105497798,105498617	105491522,105491700,105492309,105492734,105493933,105496086,105497443,105497977,105499182	Gene ID= ENSG00000185347.17 TPM= 2.34 Transcript Type= protein_coding
chr14	105526603	105530202	105526603	105530202	+	ENST00000392519.6@TMEM121	ENST00000392519.6	protein_coding	105526603,105528722	105526653,105530202	Gene ID= ENSG00000184986.10 TPM= 8.17 Transcript Type= protein_coding
chr14	105586889	105588395	105586889	105588395	-	ENST00000390539.2@IGHA2	ENST00000390539.2	IG_C_gene	105588089,105587554,105586889	105588395,105587874,105587331	Gene ID= ENSG00000211890.4 TPM= 36.2 Transcript Type= IG_C_gene
chr14	105624341	105626066	105624341	105626066	-	ENST00000390543.3@IGHG4	ENST00000390543.3	IG_C_gene	105625772,105625344,105624896,105624341	105626066,105625379,105625225,105624798	Gene ID= ENSG00000211892.4 TPM= 8.17 Transcript Type= IG_C_gene
chr14	105643068	105644790	105643068	105644790	-	ENST00000390545.3@IGHG2	ENST00000390545.3	IG_C_gene	105644496,105644068,105643623,105643068	105644790,105644103,105643949,105643525	Gene ID= ENSG00000211893.4 TPM= 129.6 Transcript Type= IG_C_gene
chr14	105668119	106088654	105668119	106088654	-	transcript4605.chr14.nnic@IGHG1	transcript4605.chr14.nnic	IG_C_gene	106088589,106062559,106062145,105863198,105742777,105742341,105741893,105668119	106088654,106062619,106062455,105863246,105743070,105742385,105742222,105668565	Gene ID= ENSG00000211896.7 TPM= 18.05 Transcript Type= NA
chr14	105668119	105987174	105668119	105987174	-	transcript4755.chr14.nnic@IGHG1	transcript4755.chr14.nnic	IG_C_gene	105986974,105986576,105864215,105742777,105742341,105741893,105668119	105987174,105986888,105864260,105743070,105742385,105742222,105668565	Gene ID= ENSG00000211896.7 TPM= 23.95 Transcript Type= NA
chr14	105736343	105743071	105736343	105743071	-	ENST00000390548.6@IGHG1	ENST00000390548.6	IG_C_gene	105742777,105742341,105741893,105741481,105740063,105736343	105743071,105742385,105742222,105741795,105740193,105737845	Gene ID= ENSG00000211896.7 TPM= 1.77 Transcript Type= IG_C_gene
chr14	105741338	105743071	105741338	105743071	-	ENST00000390549.6@IGHG1	ENST00000390549.6	IG_C_gene	105742777,105742341,105741893,105741338	105743071,105742385,105742222,105741795	Gene ID= ENSG00000211896.7 TPM= 15.79 Transcript Type= IG_C_gene
chr14	105707118	106012406	105707118	106012406	-	transcript4887.chr14.nnic@IGHA1	transcript4887.chr14.nnic	IG_C_gene	106012311,106011942,105986576,105865407,105708359,105707785,105707118	106012406,106012228,105986601,105865455,105708664,105708144,105707562	Gene ID= ENSG00000211895.5 TPM= 15.4 Transcript Type= NA
chr14	105707118	105710388	105707118	105710388	-	transcript5033.chr14.nnic@IGHA1	transcript5033.chr14.nnic	IG_C_gene	105710376,105708359,105707785,105707118	105710388,105708568,105708144,105707562	Gene ID= ENSG00000211895.5 TPM= 16.45 Transcript Type= NA
chr14	105703995	105708665	105703995	105708665	-	ENST00000641837.1@IGHA1	ENST00000641837.1	IG_C_gene	105708359,105707785,105707230,105704367,105703995	105708665,105708144,105707562,105704584,105704086	Gene ID= ENSG00000211895.5 TPM= 1.27 Transcript Type= IG_C_gene
chr14	105707118	105708665	105707118	105708665	-	ENST00000390547.3@IGHA1	ENST00000390547.3	IG_C_gene	105708359,105707785,105707118	105708665,105708144,105707562	Gene ID= ENSG00000211895.5 TPM= 268.65 Transcript Type= IG_C_gene
chr14	105769102	105771405	105769102	105771405	-	ENST00000390551.6@IGHG3	ENST00000390551.6	IG_C_gene	105771112,105770669,105770481,105770293,105770105,105769657,105769102	105771405,105770719,105770525,105770337,105770149,105769986,105769559	Gene ID= ENSG00000211897.9 TPM= 17.9 Transcript Type= IG_C_gene
chr14	105854220	105856218	105854220	105856218	-	ENST00000390559.6@IGHM	ENST00000390559.6	IG_C_gene	105855906,105855480,105854917,105854220	105856218,105855815,105855234,105854737	Gene ID= ENSG00000211899.9 TPM= 27.02 Transcript Type= IG_C_gene
chr15	20383119	20462530	20383119	20462530	-	transcript9.chr15.nnic@HERC2P3	transcript9.chr15.nnic	transcribed_unprocessed_pseudogene	20462343,20461192,20458233,20457827,20457593,20457305,20454540,20453840,20453620,20453351,20452368,20445859,20444227,20443371,20440474,20439508,20438927,20438592,20437294,20435849,20431093,20407572,20383119	20462530,20461342,20458447,20457959,20457720,20457500,20454673,20454010,20453762,20453502,20452588,20446046,20444419,20443521,20440642,20439655,20439123,20438822,20437432,20435992,20431235,20407617,20383456	Gene ID= ENSG00000180229.12 TPM= 5.84 Transcript Type= NA
chr15	22494835	22590815	22494835	22590815	+	transcript24.chr15.nnic@HERC2P2	transcript24.chr15.nnic	transcribed_unprocessed_pseudogene	22494835,22495570,22516876,22523042,22523347,22534068,22537438,22537993,22539097,22541995,22542483,22542723,22542943,22545767,22546430,22546678,22546938,22547881,22554385,22556012,22556910,22559789,22560788,22561559,22562949,22564389,22566305,22569149,22572929,22573279,22573975,22577159,22577430,22579584,22587344,22589943	22494955,22495672,22516990,22523201,22523478,22534243,22537608,22538096,22539247,22542209,22542615,22542850,22543138,22545900,22546600,22546820,22547089,22548072,22554572,22556204,22557092,22559970,22561454,22561789,22563087,22564532,22566362,22569291,22573181,22573415,22574073,22577332,22577555,22579723,22587391,22590815	Gene ID= ENSG00000276550.4 TPM= 9.45 Transcript Type= NA
chr15	22494860	22590815	22494860	22590815	+	transcript54.chr15.nnic@HERC2P2	transcript54.chr15.nnic	transcribed_unprocessed_pseudogene	22494860,22495570,22516876,22534068,22537438,22537993,22539097,22541995,22542483,22542723,22542943,22545767,22546430,22546678,22546938,22547881,22554385,22556012,22556910,22559789,22560788,22561258,22561559,22562949,22564389,22566305,22569149,22572929,22573279,22573975,22577159,22577430,22579584,22587344,22589943	22494955,22495672,22516990,22534243,22537608,22538096,22539247,22542209,22542615,22542850,22543138,22545900,22546600,22546820,22547089,22548072,22554572,22556204,22557092,22559970,22560935,22561454,22561789,22563087,22564532,22566362,22569291,22573181,22573415,22574073,22577332,22577555,22579723,22587391,22590815	Gene ID= ENSG00000276550.4 TPM= 12.12 Transcript Type= NA
chr15	22494873	22590817	22494873	22590817	+	transcript75.chr15.nnic@HERC2P2	transcript75.chr15.nnic	transcribed_unprocessed_pseudogene	22494873,22495570,22516876,22534068,22537438,22537993,22539097,22541995,22542483,22542723,22542943,22545767,22546430,22546678,22546938,22547881,22554385,22556012,22556910,22559789,22560788,22561559,22562949,22564389,22566305,22569149,22572929,22573279,22573975,22577159,22577430,22579584,22587344,22589680	22494955,22495672,22516990,22534243,22537608,22538096,22539247,22542209,22542615,22542850,22543138,22545900,22546600,22546820,22547089,22548072,22554572,22556204,22557092,22559970,22561454,22561789,22563087,22564532,22566362,22569291,22573181,22573415,22574073,22577332,22577555,22579723,22587391,22590817	Gene ID= ENSG00000276550.4 TPM= 7.83 Transcript Type= NA
chr15	22494865	22590817	22494865	22590817	+	transcript95.chr15.nnic@HERC2P2	transcript95.chr15.nnic	transcribed_unprocessed_pseudogene	22494865,22495570,22516876,22534068,22537438,22537993,22539097,22541995,22542483,22542723,22542943,22545767,22546430,22546678,22546938,22547881,22554385,22556012,22556910,22559789,22560788,22561559,22562949,22564389,22569149,22572929,22573279,22573975,22577159,22577430,22579584,22587344,22589680	22494955,22495672,22516990,22534243,22537608,22538096,22539247,22542209,22542615,22542850,22543138,22545900,22546600,22546820,22547089,22548072,22554572,22556204,22557092,22559970,22561454,22561789,22563087,22564532,22569291,22573181,22573415,22574073,22577332,22577555,22579723,22587391,22590817	Gene ID= ENSG00000276550.4 TPM= 9.35 Transcript Type= NA
chr15	22494851	22590815	22494851	22590815	+	transcript96.chr15.nnic@HERC2P2	transcript96.chr15.nnic	transcribed_unprocessed_pseudogene	22494851,22495570,22516876,22534068,22537438,22537993,22539097,22541995,22542483,22542723,22542943,22545767,22546430,22546678,22546938,22547881,22554385,22556012,22556910,22559789,22560788,22561559,22562949,22564389,22569149,22572929,22573279,22573975,22577159,22577430,22579584,22587344,22589943	22494955,22495672,22516990,22534243,22537608,22538096,22539247,22542209,22542615,22542850,22543138,22545900,22546600,22546820,22547089,22548072,22554572,22556204,22557092,22559970,22561454,22561789,22563087,22564532,22569291,22573181,22573415,22574073,22577332,22577555,22579723,22587391,22590815	Gene ID= ENSG00000276550.4 TPM= 8.24 Transcript Type= NA
chr15	22575113	22590817	22575113	22590817	+	transcript118.chr15.nic@HERC2P2	transcript118.chr15.nic	transcribed_unprocessed_pseudogene	22575113,22577430,22579584,22587344	22577332,22577555,22579723,22590817	Gene ID= ENSG00000276550.4 TPM= 24.16 Transcript Type= NA
chr15	22575113	22590817	22575113	22590817	+	transcript119.chr15.nic@HERC2P2	transcript119.chr15.nic	transcribed_unprocessed_pseudogene	22575113,22577430,22587344	22577332,22579723,22590817	Gene ID= ENSG00000276550.4 TPM= 10.15 Transcript Type= NA
chr15	22786632	22829791	22786632	22829791	+	ENST00000337435.8@NIPA1	ENST00000337435.8	protein_coding	22786632,22810749,22812163,22820313,22823728	22786834,22810796,22812253,22820473,22829791	Gene ID= ENSG00000170113.15 TPM= 19.85 Transcript Type= protein_coding
chr15	22838660	22868384	22838660	22868384	+	ENST00000337451.7@NIPA2	ENST00000337451.7	protein_coding	22838660,22839655,22845146,22851639,22853212,22858540,22860629,22866213	22838921,22839790,22845267,22851870,22853268,22858630,22860789,22868384	Gene ID= ENSG00000140157.14 TPM= 7.01 Transcript Type= protein_coding
chr15	22838667	22867716	22838667	22867716	+	transcript172.chr15.nic@NIPA2	transcript172.chr15.nic	protein_coding	22838667,22839655,22845146,22851639,22853212,22858540,22860629,22866213	22839174,22839790,22845267,22851870,22853268,22858630,22860789,22867716	Gene ID= ENSG00000140157.14 TPM= 4.67 Transcript Type= NA
chr15	22838641	22868384	22838641	22868384	+	ENST00000398014.6@NIPA2	ENST00000398014.6	protein_coding	22838641,22839655,22851639,22853212,22858540,22860629,22866213	22838921,22839790,22851870,22853268,22858630,22860789,22868384	Gene ID= ENSG00000140157.14 TPM= 5.84 Transcript Type= protein_coding
chr15	22838671	22867716	22838671	22867716	+	transcript197.chr15.nic@NIPA2	transcript197.chr15.nic	protein_coding	22838671,22845146,22851639,22853212,22858540,22860629,22866213	22838921,22845267,22851870,22853268,22858630,22860789,22867716	Gene ID= ENSG00000140157.14 TPM= 7.01 Transcript Type= NA
chr15	22838661	22867716	22838661	22867716	+	transcript202.chr15.nnic@NIPA2	transcript202.chr15.nnic	protein_coding	22838661,22851639,22853212,22858540,22860629,22866213	22838947,22851870,22853268,22858630,22860789,22867716	Gene ID= ENSG00000140157.14 TPM= 7.01 Transcript Type= NA
chr15	22838688	22867716	22838688	22867716	+	transcript213.chr15.nic@NIPA2	transcript213.chr15.nic	protein_coding	22838688,22851639,22853212,22858540,22860629,22866213	22839174,22851870,22853268,22858630,22860789,22867716	Gene ID= ENSG00000140157.14 TPM= 4.67 Transcript Type= NA
chr15	22838687	22867716	22838687	22867716	+	ENST00000398013.7@NIPA2	ENST00000398013.7	protein_coding	22838687,22851639,22853212,22858540,22860629,22866213	22838921,22851870,22853268,22858630,22860789,22867716	Gene ID= ENSG00000140157.14 TPM= 22.18 Transcript Type= protein_coding
chr15	22869466	22980352	22869466	22980352	-	ENST00000610365.4@CYFIP1	ENST00000610365.4	protein_coding	22980287,22947911,22947169,22947003,22944862,22944558,22943173,22939411,22939192,22937104,22933802,22932223,22927906,22925982,22918692,22917788,22916477,22914726,22912179,22910737,22910520,22909194,22903706,22892890,22882868,22881846,22879913,22875199,22874550,22873491,22872825,22869466	22980352,22948029,22947291,22947092,22944939,22944659,22943354,22939507,22939320,22937208,22933893,22932340,22928028,22926107,22918858,22917935,22916630,22914882,22912275,22910813,22910628,22909313,22903905,22892977,22883011,22881936,22880043,22875271,22874644,22873729,22872972,22870192	Gene ID= ENSG00000273749.4 TPM= 20.53 Transcript Type= protein_coding
chr15	22869466	22980386	22869466	22980386	-	transcript137.chr15.nic@CYFIP1	transcript137.chr15.nic	protein_coding	22980287,22947169,22947003,22944862,22944558,22943173,22939411,22939192,22937104,22933802,22932223,22927906,22925982,22918692,22917788,22916477,22914726,22912179,22910737,22910520,22909194,22903706,22892890,22882868,22881846,22879913,22875199,22874550,22873491,22872825,22869466	22980386,22947318,22947092,22944939,22944659,22943354,22939507,22939320,22937208,22933893,22932340,22928028,22926107,22918858,22917935,22916630,22914882,22912275,22910813,22910628,22909313,22903905,22892977,22883011,22881936,22880043,22875271,22874644,22873729,22872972,22870192	Gene ID= ENSG00000273749.4 TPM= 26.36 Transcript Type= NA
chr15	22867052	22980335	22867052	22980335	-	ENST00000617928.4@CYFIP1	ENST00000617928.4	protein_coding	22980287,22947169,22947003,22944862,22944558,22943173,22939411,22939192,22937104,22933802,22932223,22927906,22925982,22918692,22917788,22916477,22914726,22912179,22910737,22910520,22909194,22903706,22892890,22882868,22881846,22879913,22875199,22874550,22873491,22872825,22867052	22980335,22947291,22947092,22944939,22944659,22943354,22939507,22939320,22937208,22933893,22932340,22928028,22926107,22918858,22917935,22916630,22914882,22912275,22910813,22910628,22909313,22903905,22892977,22883011,22881936,22880043,22875271,22874644,22873729,22872972,22870192	Gene ID= ENSG00000273749.4 TPM= 15.96 Transcript Type= protein_coding
chr15	22948978	22952673	22948978	22952673	+	transcript217.chr15.nnic@NA	transcript217.chr15.nnic	NA	22948978	22952673	Gene ID= novel_gene_chr15_218 TPM= 3.5 Transcript Type= NA
chr15	22999176	23039673	22999176	23039673	-	ENST00000615383.4@TUBGCP5	ENST00000615383.4	protein_coding	23039398,23037099,23036897,23032728,23031950,23030885,23027192,23026116,23024737,23023947,23021959,23019219,23017773,23011133,23009945,23008699,23006268,23006052,23005432,23004102,23003065,23000569,22999176	23039673,23037152,23037005,23032824,23032029,23031020,23027306,23026205,23024830,23024193,23022161,23019334,23018041,23011331,23010133,23008881,23006352,23006172,23005610,23004227,23003153,23000669,22999866	Gene ID= ENSG00000275835.4 TPM= 8.17 Transcript Type= protein_coding
chr15	23303713	23314566	23303713	23314566	+	transcript227.chr15.nnic@AC242376.2	transcript227.chr15.nnic	unprocessed_pseudogene	23303713,23304428,23309140,23309607,23310152,23310803,23311360,23311605,23313105	23303818,23304530,23309457,23309735,23310297,23310974,23311512,23311729,23314566	Gene ID= ENSG00000274471.1 TPM= 2.34 Transcript Type= NA
chr15	23303713	23314566	23303713	23314566	+	transcript229.chr15.nnic@AC242376.2	transcript229.chr15.nnic	unprocessed_pseudogene	23303713,23304428,23309140,23309607,23310152,23310803,23311605,23313105	23303818,23304530,23309457,23309735,23310297,23311512,23311729,23314566	Gene ID= ENSG00000274471.1 TPM= 2.34 Transcript Type= NA
chr15	23303713	23314566	23303713	23314566	+	transcript230.chr15.nnic@AC242376.2	transcript230.chr15.nnic	unprocessed_pseudogene	23303713,23304428,23309140,23309607,23311605,23313105	23303818,23304530,23309457,23311512,23311729,23314566	Gene ID= ENSG00000274471.1 TPM= 3.5 Transcript Type= NA
chr15	23565684	23568020	23565684	23568020	+	ENST00000314520.4@MKRN3	ENST00000314520.4	protein_coding	23565684	23568020	Gene ID= ENSG00000179455.7 TPM= 2.34 Transcript Type= protein_coding
chr15	23685400	23687330	23685400	23687330	-	ENST00000331837.5@NDN	ENST00000331837.5	protein_coding	23685400	23687330	Gene ID= ENSG00000182636.5 TPM= 10.51 Transcript Type= protein_coding
chr15	24954989	24978582	24954989	24978582	+	transcript239.chr15.nic@SNRPN	transcript239.chr15.nic	protein_coding	24954989,24962114,24967029,24967932,24974311,24975358,24976305,24976877,24977778,24978193,24978407	24955062,24962209,24967152,24968082,24974456,24975509,24976416,24977029,24977916,24978318,24978582	Gene ID= ENSG00000128739.21 TPM= 4.29 Transcript Type= NA
chr15	24954927	24978723	24954927	24978723	+	ENST00000390687.8@SNRPN	ENST00000390687.8	protein_coding	24954927,24962114,24967932,24974311,24975358,24976305,24976877,24977778,24978193,24978407	24955062,24962209,24968082,24974456,24975509,24976416,24977029,24977916,24978318,24978723	Gene ID= ENSG00000128739.21 TPM= 105.08 Transcript Type= protein_coding
chr15	24955373	24978582	24955373	24978582	+	transcript248.chr15.nnic@SNRPN	transcript248.chr15.nnic	protein_coding	24955373,24962114,24967932,24974311,24975358,24976305,24976877,24977778,24978193,24978407	24955398,24962209,24968082,24974456,24975509,24976416,24977029,24977916,24978318,24978582	Gene ID= ENSG00000128739.21 TPM= 5.45 Transcript Type= NA
chr15	24954935	24978583	24954935	24978583	+	ENST00000346403.10@SNRPN	ENST00000346403.10	protein_coding	24954935,24962114,24967932,24974387,24975358,24976305,24976877,24977778,24978193,24978407	24955062,24962209,24968082,24974456,24975509,24976416,24977029,24977916,24978318,24978583	Gene ID= ENSG00000128739.21 TPM= 5.84 Transcript Type= protein_coding
chr15	24955005	24978548	24955005	24978548	+	ENST00000577565.1@SNRPN	ENST00000577565.1	protein_coding	24955005,24962114,24967932,24974288,24975358,24976305,24976877,24977778,24978193,24978407	24955062,24962209,24968082,24974456,24975509,24976416,24977029,24977916,24978318,24978548	Gene ID= ENSG00000128739.21 TPM= 101.58 Transcript Type= protein_coding
chr15	25339106	25439015	25339106	25439015	-	transcript261.chr15.nic@UBE3A	transcript261.chr15.nic	protein_coding	25438489,25411908,25409088,25408620,25407067,25405461,25375465,25370566,25360383,25356691,25355892,25354528,25354353,25340085,25339106	25439015,25411971,25409207,25408684,25407262,25405502,25375763,25371812,25360527,25356896,25356056,25354683,25354426,25340228,25339257	Gene ID= ENSG00000114062.18 TPM= 5.45 Transcript Type= NA
chr15	25339106	25439094	25339106	25439094	-	transcript266.chr15.nnic@UBE3A	transcript266.chr15.nnic	protein_coding	25438489,25415710,25411908,25409088,25405461,25375465,25370566,25360383,25356691,25355892,25354528,25354353,25340085,25339106	25439094,25415842,25411971,25409207,25405502,25375763,25371812,25360527,25356896,25356056,25354683,25354426,25340228,25339257	Gene ID= ENSG00000114062.18 TPM= 4.29 Transcript Type= NA
chr15	25339106	25439081	25339106	25439081	-	transcript273.chr15.nic@UBE3A	transcript273.chr15.nic	protein_coding	25438489,25411908,25405461,25375465,25370566,25360383,25356691,25355892,25354528,25354353,25340085,25339106	25439081,25411971,25405502,25375763,25371812,25360527,25356896,25356056,25354683,25354426,25340228,25339257	Gene ID= ENSG00000114062.18 TPM= 10.12 Transcript Type= NA
chr15	25339106	25439081	25339106	25439081	-	transcript277.chr15.nic@UBE3A	transcript277.chr15.nic	protein_coding	25438489,25411908,25409088,25405461,25375465,25370566,25360383,25356691,25355892,25354528,25354353,25339106	25439081,25411971,25409207,25405502,25375763,25371812,25360527,25356896,25356056,25354683,25354426,25340228	Gene ID= ENSG00000114062.18 TPM= 3.5 Transcript Type= NA
chr15	25354033	25439051	25354033	25439051	-	ENST00000625778.2@UBE3A	ENST00000625778.2	protein_coding	25438489,25405461,25375465,25370566,25360383,25356691,25355892,25354528,25354033	25439051,25405502,25375763,25371812,25360527,25356896,25356056,25354683,25354426	Gene ID= ENSG00000114062.18 TPM= 1.17 Transcript Type= protein_coding
chr15	25764275	25766920	25764275	25766920	+	transcript307.chr15.nnic@NA	transcript307.chr15.nnic	NA	25764275	25766920	Gene ID= novel_gene_chr15_308 TPM= 4.67 Transcript Type= NA
chr15	25786794	25789170	25786794	25789170	-	transcript311.chr15.nnic@NA	transcript311.chr15.nnic	NA	25786794	25789170	Gene ID= novel_gene_chr15_312 TPM= 2.34 Transcript Type= NA
chr15	25862642	25863995	25862642	25863995	+	transcript309.chr15.nnic@NA	transcript309.chr15.nnic	NA	25862642	25863995	Gene ID= novel_gene_chr15_310 TPM= 3.5 Transcript Type= NA
chr15	28111040	28322152	28111040	28322152	-	ENST00000261609.11@HERC2	ENST00000261609.11	protein_coding	28322075,28321362,28299402,28292888,28280068,28274905,28274291,28272894,28272215,28270695,28269248,28268465,28265817,28265618,28262918,28260777,28257061,28256089,28255872,28254340,28248552,28246742,28245881,28238602,28238114,28236963,28234070,28233664,28233434,28233146,28230367,28229674,28229460,28229195,28228218,28222028,28220452,28218489,28215621,28214655,28214076,28213742,28212445,28211002,28206240,28202347,28202113,28201456,28198601,28198378,28196461,28196215,28191961,28191139,28190965,28186577,28182401,28179142,28178887,28177419,28176950,28176687,28176428,28175512,28174395,28169484,28168407,28167687,28163094,28152677,28146237,28144673,28144077,28143873,28142827,28142238,28141731,28141432,28135478,28132653,28132100,28130503,28130163,28125006,28124037,28121346,28117013,28116665,28115429,28114612,28113573,28113071,28111040	28322152,28321464,28299516,28293022,28280287,28275005,28274447,28273004,28272386,28270868,28269436,28268616,28265974,28265731,28263169,28260970,28257261,28256317,28255996,28254518,28248736,28246897,28246066,28238772,28238217,28237113,28234284,28233796,28233561,28233341,28230500,28229847,28229596,28229346,28228409,28222215,28220644,28218671,28215802,28214802,28214272,28213972,28212583,28211145,28206382,28202614,28202249,28201554,28198769,28198503,28196569,28196354,28192151,28191244,28191056,28186752,28182512,28179223,28179030,28177509,28177127,28176768,28176599,28175656,28174620,28169655,28168590,28167827,28163285,28152830,28146344,28144804,28144235,28143991,28142952,28142393,28141846,28141630,28135692,28132830,28132261,28130594,28130302,28125193,28124234,28121429,28117154,28116859,28115541,28114802,28113678,28113283,28112035	Gene ID= ENSG00000128731.15 TPM= 37.36 Transcript Type= protein_coding
chr15	28671046	28682654	28671046	28682654	+	transcript322.chr15.nic@HERC2P9	transcript322.chr15.nic	transcribed_unprocessed_pseudogene	28671046,28671731,28673888,28681796	28671633,28671856,28674027,28682654	Gene ID= ENSG00000206149.10 TPM= 10.51 Transcript Type= NA
chr15	28665163	28669232	28665163	28669232	+	transcript324.chr15.nic@HERC2P9	transcript324.chr15.nic	transcribed_unprocessed_pseudogene	28665163,28667561,28668257	28667463,28667697,28669232	Gene ID= ENSG00000206149.10 TPM= 2.34 Transcript Type= NA
chr15	28671046	28682654	28671046	28682654	+	transcript326.chr15.nic@HERC2P9	transcript326.chr15.nic	transcribed_unprocessed_pseudogene	28671046,28671731,28681796	28671633,28674027,28682654	Gene ID= ENSG00000206149.10 TPM= 3.5 Transcript Type= NA
chr15	28886006	29118315	28886006	29118315	+	transcript331.chr15.nic@APBA2	transcript331.chr15.nic	protein_coding	28886006,28921640,28995753,29053845,29074921,29076055,29093075,29098490,29101599,29105379,29106607,29108270,29113876,29117062	28886278,28921749,28995806,29054835,29075001,29076091,29093220,29098576,29101784,29105558,29106819,29108389,29114016,29118315	Gene ID= ENSG00000034053.14 TPM= 2.34 Transcript Type= NA
chr15	28886022	29117717	28886022	29117717	+	ENST00000558330.5@APBA2	ENST00000558330.5	protein_coding	28886022,28895520,28921640,28995753,29053845,29074921,29076055,29093075,29098490,29101599,29105379,29106607,29108270,29113876,29117062	28886278,28895609,28921749,28995806,29054835,29075001,29076091,29093220,29098576,29101784,29105558,29106819,29108389,29114016,29117717	Gene ID= ENSG00000034053.14 TPM= 1.17 Transcript Type= protein_coding
chr15	28921637	29118311	28921637	29118311	+	ENST00000411764.5@APBA2	ENST00000411764.5	protein_coding	28921637,28995753,29053845,29074921,29076055,29093075,29098490,29101599,29105379,29106607,29108270,29113876,29117062	28921749,28995806,29054835,29075001,29076091,29093220,29098576,29101784,29105558,29106819,29108389,29114016,29118311	Gene ID= ENSG00000034053.14 TPM= 1.17 Transcript Type= protein_coding
chr15	29120254	29570723	29120254	29570723	-	ENST00000261275.4@FAM189A1	ENST00000261275.4	protein_coding	29570505,29381775,29252368,29196430,29151734,29137034,29136366,29128789,29126267,29124687,29120254	29570723,29381831,29252478,29196564,29151841,29137194,29136501,29128864,29126491,29124761,29123655	Gene ID= ENSG00000104059.4 TPM= 4.67 Transcript Type= protein_coding
chr15	29268149	29269826	29268149	29269826	-	transcript333.chr15.nnic@NA	transcript333.chr15.nnic	NA	29268149	29269826	Gene ID= novel_gene_chr15_334 TPM= 16.35 Transcript Type= NA
chr15	29699367	29822503	29699367	29822503	-	ENST00000346128.10@TJP1	ENST00000346128.10	protein_coding	29822002,29800646,29773233,29772064,29766266,29762335,29761601,29761139,29742642,29741331,29737264,29734274,29733094,29732631,29732433,29727937,29726781,29726379,29720358,29719777,29718266,29718021,29716611,29710831,29708559,29705528,29704222,29699367	29822503,29800702,29773357,29772166,29766542,29762438,29761769,29761286,29742781,29741436,29737414,29734382,29733313,29732815,29732528,29728019,29726991,29726479,29720708,29720016,29719138,29718118,29716838,29711000,29709036,29705745,29704305,29701689	Gene ID= ENSG00000104067.16 TPM= 37.36 Transcript Type= protein_coding
chr15	30004948	30045869	30004948	30045869	-	transcript340.chr15.nnic@AC111152.2	transcript340.chr15.nnic	lincRNA	30045711,30033434,30007599,30006985,30004948	30045869,30033562,30007779,30007070,30005789	Gene ID= ENSG00000259647.1 TPM= 2.34 Transcript Type= NA
chr15	30471098	30490313	30471098	30490313	+	transcript349.chr15.nnic@AC127502.1	transcript349.chr15.nnic	transcribed_unprocessed_pseudogene	30471098,30473812,30474356,30477787,30479024,30483119,30484502,30489268	30471426,30473930,30474512,30477942,30479193,30483248,30484686,30490313	Gene ID= ENSG00000215302.8 TPM= 5.84 Transcript Type= NA
chr15	30903854	30943108	30903854	30943108	+	transcript356.chr15.nic@FAN1	transcript356.chr15.nic	protein_coding	30903854,30904512,30908118,30910614,30913858,30918164,30920545,30922235,30925127,30925789,30928553,30929203,30930543,30937119,30941566	30903887,30905897,30908258,30910815,30914091,30918295,30920653,30922354,30925291,30925939,30928656,30929397,30930671,30937259,30943108	Gene ID= ENSG00000198690.9 TPM= 6.42 Transcript Type= NA
chr15	30903873	30943108	30903873	30943108	+	ENST00000362065.8@FAN1	ENST00000362065.8	protein_coding	30903873,30904512,30908118,30910614,30913858,30918164,30920545,30922235,30925127,30925789,30928553,30929203,30930543,30937119,30941566	30904011,30905897,30908258,30910815,30914091,30918295,30920653,30922354,30925291,30925939,30928656,30929397,30930671,30937259,30943108	Gene ID= ENSG00000198690.9 TPM= 12.26 Transcript Type= protein_coding
chr15	30903852	30911788	30903852	30911788	+	ENST00000561594.5@FAN1	ENST00000561594.5	protein_coding	30903852,30904512,30908118,30910614	30903887,30905897,30908258,30911788	Gene ID= ENSG00000198690.9 TPM= 1.17 Transcript Type= protein_coding
chr15	30903892	30911643	30903892	30911643	+	ENST00000561607.5@FAN1	ENST00000561607.5	protein_coding	30903892,30904512,30908118,30910614	30904024,30905897,30908258,30911643	Gene ID= ENSG00000198690.9 TPM= 1.17 Transcript Type= protein_coding
chr15	30938943	30991618	30938943	30991618	-	transcript355.chr15.nnic@MTMR10	transcript355.chr15.nnic	protein_coding	30991447,30990777,30976819,30974931,30974314,30967920,30960881,30959034,30958863,30954763,30953562,30951968,30948302,30947130,30942890,30938943	30991618,30990837,30976955,30975003,30974456,30968010,30961073,30959121,30958951,30954893,30953631,30952038,30948471,30947300,30943072,30942109	Gene ID= ENSG00000166912.16 TPM= 3.12 Transcript Type= NA
chr15	30938941	30991908	30938941	30991908	-	transcript365.chr15.nic@MTMR10	transcript365.chr15.nic	protein_coding	30991447,30990777,30976819,30974931,30974314,30960881,30959034,30958863,30954763,30953562,30951968,30948302,30947130,30942890,30938941	30991908,30990837,30976955,30975003,30974456,30961073,30959121,30958951,30954893,30953631,30952038,30948471,30947300,30943072,30942072	Gene ID= ENSG00000166912.16 TPM= 3.12 Transcript Type= NA
chr15	30938941	30991604	30938941	30991604	-	ENST00000435680.5@MTMR10	ENST00000435680.5	protein_coding	30991447,30990777,30976819,30974931,30974314,30967920,30960881,30959034,30958863,30954763,30953562,30951968,30948302,30947130,30942890,30938941	30991604,30990837,30976955,30975003,30974456,30968010,30961073,30959121,30958951,30954893,30953631,30952038,30948471,30947300,30943072,30942072	Gene ID= ENSG00000166912.16 TPM= 25.3 Transcript Type= protein_coding
chr15	31214198	31215925	31214198	31215925	-	transcript377.chr15.nnic@NA	transcript377.chr15.nnic	NA	31214198	31215925	Gene ID= novel_gene_chr15_378 TPM= 2.34 Transcript Type= NA
chr15	31325107	31327925	31325107	31327925	-	transcript383.chr15.nnic@NA	transcript383.chr15.nnic	NA	31325107	31327925	Gene ID= novel_gene_chr15_384 TPM= 2.34 Transcript Type= NA
chr15	31345390	31372418	31345390	31372418	+	transcript382.chr15.nnic@KLF13	transcript382.chr15.nnic	protein_coding	31345390,31372010	31345571,31372418	Gene ID= ENSG00000169926.10 TPM= 3.5 Transcript Type= NA
chr15	31326855	31377899	31326855	31377899	+	ENST00000307145.3@KLF13	ENST00000307145.3	protein_coding	31326855,31372010	31327789,31377899	Gene ID= ENSG00000169926.10 TPM= 43.2 Transcript Type= protein_coding
chr15	32517398	32536650	32517398	32536650	-	transcript390.chr15.nnic@AC135983.2	transcript390.chr15.nnic	transcribed_processed_pseudogene	32536298,32533794,32533212,32529783,32528532,32526813,32524471,32523029,32522448,32517398	32536650,32533912,32533368,32529938,32528701,32526978,32524600,32523213,32522567,32518897	Gene ID= ENSG00000223509.8 TPM= 2.72 Transcript Type= NA
chr15	32517398	32536659	32517398	32536659	-	transcript395.chr15.nnic@AC135983.2	transcript395.chr15.nnic	transcribed_processed_pseudogene	32536298,32533212,32529783,32528532,32526813,32523029,32522448,32517398	32536659,32533368,32529938,32528701,32526978,32523213,32522567,32518445	Gene ID= ENSG00000223509.8 TPM= 2.72 Transcript Type= NA
chr15	32517398	32536659	32517398	32536659	-	transcript396.chr15.nnic@AC135983.2	transcript396.chr15.nnic	transcribed_processed_pseudogene	32536298,32533212,32529783,32528532,32526813,32524471,32523029,32517398	32536659,32533368,32529938,32528701,32526978,32524600,32523213,32518445	Gene ID= ENSG00000223509.8 TPM= 2.72 Transcript Type= NA
chr15	32536721	32581074	32536721	32581074	+	transcript403.chr15.nnic@LINC02256	transcript403.chr15.nnic	lincRNA	32536721,32536769,32575571,32575917,32579708	32536732,32537006,32575668,32576000,32581074	Gene ID= ENSG00000261064.1 TPM= 3.5 Transcript Type= NA
chr15	32536701	32580625	32536701	32580625	+	transcript404.chr15.nnic@LINC02256	transcript404.chr15.nnic	lincRNA	32536701,32575571,32575917,32579708	32537006,32575668,32576000,32580625	Gene ID= ENSG00000261064.1 TPM= 4.67 Transcript Type= NA
chr15	32615490	32639949	32615490	32639949	+	ENST00000361627.7@ARHGAP11A	ENST00000361627.7	protein_coding	32615490,32620108,32623492,32624173,32625080,32625487,32628728,32629595,32632979,32633933,32635777,32636257	32616340,32620178,32623588,32624426,32625243,32625633,32628802,32629762,32633108,32634041,32635915,32639949	Gene ID= ENSG00000198826.10 TPM= 1.17 Transcript Type= protein_coding
chr15	32615539	32636181	32615539	32636181	+	ENST00000567348.5@ARHGAP11A	ENST00000567348.5	protein_coding	32615539,32620108,32623492,32624173,32625080,32625487,32628728,32629595,32632979,32633933,32635777	32616340,32620178,32623588,32624426,32625243,32625633,32628802,32629762,32633108,32634041,32636181	Gene ID= ENSG00000198826.10 TPM= 1.17 Transcript Type= protein_coding
chr15	32717974	32745107	32717974	32745107	+	ENST00000622074.1@GREM1	ENST00000622074.1	protein_coding	32717974,32730690	32718161,32745107	Gene ID= ENSG00000166923.10 TPM= 1.17 Transcript Type= protein_coding
chr15	33146949	33152801	33146949	33152801	+	transcript413.chr15.nnic@NA	transcript413.chr15.nnic	NA	33146949	33152801	Gene ID= novel_gene_chr15_414 TPM= 17.51 Transcript Type= NA
chr15	33972055	34039226	33972055	34039226	-	transcript419.chr15.nnic@AVEN	transcript419.chr15.nnic	protein_coding	34038780,34003032,33972055	34039226,34003209,33974970	Gene ID= ENSG00000169857.7 TPM= 2.34 Transcript Type= NA
chr15	33866227	34039176	33866227	34039176	-	ENST00000306730.7@AVEN	ENST00000306730.7	protein_coding	34038780,34003032,33875925,33870935,33867495,33866227	34039176,34003209,33875995,33871030,33867855,33866728	Gene ID= ENSG00000169857.7 TPM= 22.18 Transcript Type= protein_coding
chr15	34084017	34101948	34084017	34101948	-	ENST00000256545.8@EMC7	ENST00000256545.8	protein_coding	34101604,34095895,34090317,34088053,34084017	34101948,34096014,34090455,34088133,34084486	Gene ID= ENSG00000134153.9 TPM= 130.77 Transcript Type= protein_coding
chr15	34141400	34210092	34141400	34210092	-	transcript426.chr15.nic@KATNBL1	transcript426.chr15.nic	protein_coding	34209951,34177821,34163560,34154644,34152790,34148632,34147380,34147200,34146761,34145398,34141400	34210092,34177999,34163690,34154684,34153069,34148750,34147430,34147289,34146850,34145491,34142371	Gene ID= ENSG00000134152.10 TPM= 2.34 Transcript Type= NA
chr15	34141812	34210117	34141812	34210117	-	transcript435.chr15.nnic@KATNBL1	transcript435.chr15.nnic	protein_coding	34209951,34163560,34154644,34152790,34148632,34147380,34147200,34146761,34145398,34141812	34210117,34163690,34154684,34152973,34148750,34147430,34147289,34146850,34145491,34142371	Gene ID= ENSG00000134152.10 TPM= 2.34 Transcript Type= NA
chr15	34140674	34210079	34140674	34210079	-	ENST00000256544.7@KATNBL1	ENST00000256544.7	protein_coding	34209951,34163560,34154644,34152790,34148632,34147380,34147200,34146761,34145398,34140674	34210079,34163690,34154684,34153069,34148750,34147430,34147289,34146850,34145491,34142371	Gene ID= ENSG00000134152.10 TPM= 16.35 Transcript Type= protein_coding
chr15	34141809	34143208	34141809	34143208	-	transcript444.chr15.nnic@NA	transcript444.chr15.nnic	NA	34141809	34143208	Gene ID= novel_gene_chr15_445 TPM= 2.34 Transcript Type= NA
chr15	34224983	34230156	34224983	34230156	+	transcript449.chr15.nic@EMC4	transcript449.chr15.nic	protein_coding	34224983,34225536,34227693,34229753	34225200,34225650,34228589,34230156	Gene ID= ENSG00000128463.12 TPM= 2.34 Transcript Type= NA
chr15	34225128	34230156	34225128	34230156	+	transcript450.chr15.nnic@EMC4	transcript450.chr15.nnic	protein_coding	34225128,34225536,34228122,34229753	34225200,34226571,34228589,34230156	Gene ID= ENSG00000128463.12 TPM= 2.34 Transcript Type= NA
chr15	34225013	34230147	34225013	34230147	+	ENST00000249209.8@EMC4	ENST00000249209.8	protein_coding	34225013,34225536,34227693,34229753	34225200,34225650,34227846,34230147	Gene ID= ENSG00000128463.12 TPM= 8.76 Transcript Type= protein_coding
chr15	34225037	34230156	34225037	34230156	+	ENST00000558205.5@EMC4	ENST00000558205.5	protein_coding	34225037,34225536,34227693,34228429,34229753	34225200,34225658,34227846,34228589,34230156	Gene ID= ENSG00000128463.12 TPM= 2.92 Transcript Type= nonsense_mediated_decay
chr15	34229996	34318779	34229996	34318779	-	ENST00000290209.9@SLC12A6	ENST00000290209.9	protein_coding	34318561,34275345,34260926,34258813,34257642,34256229,34255262,34254348,34252170,34250899,34250631,34250298,34245693,34245285,34243974,34242102,34241233,34240661,34238965,34238232,34237419,34236708,34236015,34235181,34229996	34318779,34275389,34261020,34258944,34257788,34256283,34255392,34254589,34252384,34251057,34250729,34250355,34245867,34245403,34244072,34242221,34241337,34240829,34239160,34238401,34237550,34236815,34236199,34235314,34233972	Gene ID= ENSG00000140199.11 TPM= 10.51 Transcript Type= protein_coding
chr15	34341713	34343177	34341713	34343177	-	ENST00000328848.5@NOP10	ENST00000328848.5	protein_coding	34343020,34341713	34343177,34342108	Gene ID= ENSG00000182117.5 TPM= 94.58 Transcript Type= protein_coding
chr15	34358618	34367278	34358618	34367278	-	ENST00000314891.10@LPCAT4	ENST00000314891.10	protein_coding	34366987,34365559,34365008,34364194,34364013,34363661,34363422,34362782,34362573,34362196,34361400,34360111,34359589,34358618	34367278,34365701,34365228,34364306,34364073,34363719,34363456,34362836,34362655,34362321,34361532,34360209,34359745,34359302	Gene ID= ENSG00000176454.13 TPM= 14.01 Transcript Type= protein_coding
chr15	34379068	34437857	34379068	34437857	-	transcript464.chr15.nnic@GOLGA8A	transcript464.chr15.nnic	protein_coding	34437606,34437398,34435383,34407524,34406674,34404917,34400712,34399155,34398634,34391123,34389644,34386625,34385740,34385427,34385254,34385048,34383961,34383746,34383441,34382797,34382386,34382151,34381968,34381701,34379068	34437857,34437435,34435471,34407735,34406870,34405055,34400759,34399203,34398729,34391426,34389768,34387952,34385778,34385474,34385338,34385157,34384047,34383853,34383528,34383053,34382529,34382251,34382068,34381856,34381613	Gene ID= ENSG00000175265.17 TPM= 126.1 Transcript Type= NA
chr15	34420095	34437808	34420095	34437808	-	transcript487.chr15.nnic@GOLGA8A	transcript487.chr15.nnic	protein_coding	34437398,34435383,34428615,34420095	34437808,34435471,34428704,34420810	Gene ID= ENSG00000175265.17 TPM= 2.34 Transcript Type= NA
chr15	34525654	34582860	34525654	34582860	-	ENST00000484716.5@GOLGA8B	ENST00000484716.5	protein_coding	34582750,34553745,34552895,34551138,34546935,34545378,34544858,34537344,34535865,34532846,34531961,34531648,34531475,34531269,34530182,34529967,34529662,34529018,34528607,34528372,34528189,34527922,34525654	34582860,34553956,34553091,34551276,34546982,34545426,34544953,34537647,34535989,34534173,34531999,34531695,34531559,34531378,34530268,34530074,34529749,34529274,34528750,34528472,34528289,34528077,34527834	Gene ID= ENSG00000215252.11 TPM= 30.36 Transcript Type= retained_intron
chr15	34525207	34536010	34525207	34536010	-	ENST00000342314.9@GOLGA8B	ENST00000342314.9	protein_coding	34535865,34534054,34532846,34531961,34531648,34531475,34531269,34530182,34529967,34529662,34529018,34528607,34528372,34528189,34527922,34525207	34536010,34534173,34532962,34531999,34531695,34531559,34531378,34530268,34530074,34529749,34529274,34528750,34528472,34528289,34528077,34527834	Gene ID= ENSG00000215252.11 TPM= 4.67 Transcript Type= protein_coding
chr15	34851782	34969839	34851782	34969839	-	ENST00000156471.9@AQR	ENST00000156471.9	protein_coding	34969539,34964234,34960774,34952885,34948264,34944288,34942012,34940899,34938737,34934571,34932318,34930258,34927035,34920332,34918258,34915038,34910135,34906545,34904336,34900622,34897559,34896897,34893663,34890215,34886526,34884525,34882502,34875935,34874677,34873828,34870752,34867524,34862867,34860042,34851782	34969839,34964290,34960814,34952920,34948384,34944428,34942080,34940999,34938813,34934635,34932434,34930371,34927138,34920434,34918378,34915179,34910313,34906712,34904505,34900863,34897705,34896966,34893773,34890324,34886661,34884734,34882639,34876006,34874864,34873999,34870922,34867609,34863041,34860155,34857106	Gene ID= ENSG00000021776.10 TPM= 4.67 Transcript Type= protein_coding
chr15	34978341	34988287	34978341	34988287	-	ENST00000356321.4@ZNF770	ENST00000356321.4	protein_coding	34988116,34987557,34978341	34988287,34987673,34983490	Gene ID= ENSG00000198146.4 TPM= 16.35 Transcript Type= protein_coding
chr15	35370882	35546168	35370882	35546168	-	ENST00000256538.8@DPH6	ENST00000256538.8	protein_coding	35546119,35542413,35538274,35454747,35450685,35410835,35381822,35373521,35370882	35546168,35542507,35538467,35454820,35450803,35410896,35381916,35373608,35372203	Gene ID= ENSG00000134146.11 TPM= 1.17 Transcript Type= protein_coding
chr15	36891021	37098321	36891021	37098321	-	ENST00000397624.7@MEIS2	ENST00000397624.7	protein_coding	37097967,37096289,37095564,37094527,37093581,37083771,37036814,36950324,36896628,36895151,36894717,36891021	37098321,37096407,37095614,37094577,37093730,37083885,37036959,36950400,36896686,36895240,36894812,36892459	Gene ID= ENSG00000134138.19 TPM= 7.01 Transcript Type= protein_coding
chr15	37099553	37100454	37099553	37100454	-	transcript523.chr15.nnic@NA	transcript523.chr15.nnic	NA	37099553	37100454	Gene ID= novel_gene_chr15_524 TPM= 2.34 Transcript Type= NA
chr15	38071623	38073713	38071623	38073713	-	transcript528.chr15.nnic@NA	transcript528.chr15.nnic	NA	38071623	38073713	Gene ID= novel_gene_chr15_529 TPM= 2.34 Transcript Type= NA
chr15	38252326	38357249	38252326	38357249	+	ENST00000299084.8@SPRED1	ENST00000299084.8	protein_coding	38252326,38299373,38322241,38324763,38339737,38349422,38351014	38253217,38299547,38322409,38324809,38339895,38349523,38357249	Gene ID= ENSG00000166068.12 TPM= 21.02 Transcript Type= protein_coding
chr15	38286544	38290862	38286544	38290862	-	transcript551.chr15.nnic@NA	transcript551.chr15.nnic	NA	38286544	38290862	Gene ID= novel_gene_chr15_552 TPM= 2.34 Transcript Type= NA
chr15	38342030	38347254	38342030	38347254	-	transcript553.chr15.nnic@NA	transcript553.chr15.nnic	NA	38342030	38347254	Gene ID= novel_gene_chr15_554 TPM= 3.5 Transcript Type= NA
chr15	38454154	38483665	38454154	38483665	+	ENST00000491535.5@FAM98B	ENST00000491535.5	protein_coding	38454154,38464032,38465269,38470227,38473505,38474182,38481292	38454232,38464177,38465403,38470405,38473585,38474298,38483665	Gene ID= ENSG00000171262.11 TPM= 1.17 Transcript Type= protein_coding
chr15	39799145	39920240	39799145	39920240	-	transcript565.chr15.nnic@GPR176	transcript565.chr15.nnic	protein_coding	39919855,39807006,39805220,39799145	39920240,39807258,39805404,39802254	Gene ID= ENSG00000166073.10 TPM= 2.34 Transcript Type= NA
chr15	39799141	39920948	39799141	39920948	-	transcript570.chr15.nnic@GPR176	transcript570.chr15.nnic	protein_coding	39919855,39799141	39920948,39802254	Gene ID= ENSG00000166073.10 TPM= 2.34 Transcript Type= NA
chr15	39934117	40035591	39934117	40035591	+	transcript576.chr15.nic@EIF2AK4	transcript576.chr15.nic	protein_coding	39934117,39939505,39943383,39949116,39953904,39955620,39961784,39965686,39967344,39972908,39973592,39976414,39978078,39985805,39987983,39990273,39992175,39992769,39996964,39998731,40000988,40002713,40003193,40007016,40008027,40009614,40011281,40017108,40019093,40020899,40022519,40025977,40029406,40030359,40032169,40032757,40034326,40035027	39934339,39939617,39943485,39949268,39953984,39955768,39961899,39965843,39967879,39973014,39973749,39976844,39978147,39985888,39988105,39990377,39992229,39992848,39997065,39998784,40001224,40002788,40003314,40007065,40008195,40009730,40011346,40017242,40019200,40021027,40022605,40026089,40029464,40030456,40032237,40032801,40034444,40035591	Gene ID= ENSG00000128829.11 TPM= 5.25 Transcript Type= NA
chr15	39934153	40035590	39934153	40035590	+	ENST00000263791.9@EIF2AK4	ENST00000263791.9	protein_coding	39934153,39939505,39943383,39949116,39953904,39955620,39961784,39965686,39967344,39972908,39973592,39976414,39978078,39985805,39987983,39990273,39992175,39992769,39996964,39998731,40000988,40002713,40003193,40007016,40008027,40009614,40011281,40016502,40017108,40019093,40020899,40022519,40025977,40029406,40030359,40032169,40032757,40034326,40035027	39934339,39939617,39943485,39949268,39953984,39955768,39961899,39965843,39967879,39973014,39973749,39976844,39978147,39985888,39988105,39990377,39992229,39992848,39997065,39998784,40001224,40002788,40003314,40007065,40008195,40009730,40011346,40016672,40017242,40019200,40021027,40022605,40026089,40029464,40030456,40032237,40032801,40034444,40035590	Gene ID= ENSG00000128829.11 TPM= 36.78 Transcript Type= protein_coding
chr15	40034499	40037292	40034499	40037292	+	transcript583.chr15.nnic@NA	transcript583.chr15.nnic	NA	40034499	40037292	Gene ID= novel_gene_chr15_584 TPM= 12.84 Transcript Type= NA
chr15	40035739	40039188	40035739	40039188	-	ENST00000267884.10@SRP14	ENST00000267884.10	protein_coding	40039093,40038876,40038282,40036986,40035739	40039188,40038948,40038394,40037018,40036500	Gene ID= ENSG00000140319.10 TPM= 25.69 Transcript Type= protein_coding
chr15	40036041	40039164	40036041	40039164	-	ENST00000558527.5@SRP14	ENST00000558527.5	protein_coding	40039093,40038876,40038282,40037309,40036986,40036041	40039164,40038948,40038394,40037348,40037018,40036500	Gene ID= ENSG00000140319.10 TPM= 4.67 Transcript Type= processed_transcript
chr15	40087890	40108874	40087890	40108874	-	ENST00000354670.8@BMF	ENST00000354670.8	protein_coding	40108773,40108259,40105795,40104180,40087890	40108874,40108386,40106091,40104340,40091888	Gene ID= ENSG00000104081.13 TPM= 10.51 Transcript Type= protein_coding
chr15	40161026	40221136	40161026	40221136	+	ENST00000287598.10@BUB1B	ENST00000287598.10	protein_coding	40161026,40165053,40170062,40170537,40176477,40183714,40185165,40185551,40196545,40199615,40200244,40200931,40202405,40202589,40206184,40208637,40209635,40210110,40212499,40213332,40217496,40218456,40220564	40161255,40165196,40170121,40170681,40176673,40183883,40185379,40185642,40196774,40199727,40200359,40200980,40202465,40202694,40206458,40208770,40209775,40210210,40212648,40213474,40217667,40218562,40221136	Gene ID= ENSG00000156970.12 TPM= 2.34 Transcript Type= protein_coding
chr15	40252640	40277485	40252640	40277485	+	transcript599.chr15.nic@PAK6	transcript599.chr15.nic	protein_coding	40252640,40253178,40264781,40265842,40272224,40272866,40273346,40273551,40274142,40275927	40252691,40253289,40264989,40266495,40272721,40272999,40273472,40273676,40274276,40277485	Gene ID= ENSG00000137843.11 TPM= 11.68 Transcript Type= NA
chr15	40287909	40307946	40287909	40307946	-	transcript602.chr15.nic@PLCB2	transcript602.chr15.nic	protein_coding	40307589,40304001,40303288,40302469,40302270,40302136,40301957,40299128,40298798,40298562,40298223,40297877,40297521,40296758,40296522,40296296,40295201,40294936,40294266,40293560,40292926,40292339,40292064,40291849,40291265,40291018,40290761,40290577,40290025,40289272,40287909	40307946,40304078,40303356,40302609,40302349,40302189,40302032,40299228,40298964,40298708,40298380,40297959,40297605,40296908,40296634,40296392,40295285,40295060,40294420,40293724,40293025,40292443,40292158,40291924,40291487,40291183,40290837,40290672,40290082,40289358,40288918	Gene ID= ENSG00000137841.11 TPM= 10.98 Transcript Type= NA
chr15	40287909	40307946	40287909	40307946	-	transcript606.chr15.nic@PLCB2	transcript606.chr15.nic	protein_coding	40307589,40304001,40303288,40302469,40302270,40302136,40301957,40299128,40298798,40298562,40298223,40297877,40297521,40296746,40296522,40296296,40295201,40294936,40294266,40293560,40292926,40292339,40292064,40291265,40291018,40290761,40290577,40290025,40289272,40287909	40307946,40304078,40303356,40302609,40302349,40302189,40302032,40299228,40298964,40298708,40298380,40297959,40297605,40296908,40296634,40296392,40295285,40295060,40294420,40293724,40293025,40292443,40292158,40291924,40291183,40290837,40290672,40290082,40289358,40288918	Gene ID= ENSG00000137841.11 TPM= 16.61 Transcript Type= NA
chr15	40287909	40307946	40287909	40307946	-	transcript610.chr15.nic@PLCB2	transcript610.chr15.nic	protein_coding	40307589,40304001,40303288,40302469,40302270,40302136,40301957,40299128,40298798,40298562,40298223,40297877,40297521,40296746,40296522,40296296,40295201,40294936,40294266,40293560,40292926,40292339,40291265,40291018,40290761,40290577,40290025,40289272,40287909	40307946,40304078,40303356,40302609,40302349,40302189,40302032,40299228,40298964,40298708,40298380,40297959,40297605,40296908,40296634,40296392,40295285,40295060,40294420,40293724,40293025,40292443,40292158,40291183,40290837,40290672,40290082,40289358,40288918	Gene ID= ENSG00000137841.11 TPM= 12.53 Transcript Type= NA
chr15	40287907	40307922	40287907	40307922	-	ENST00000260402.7@PLCB2	ENST00000260402.7	protein_coding	40307589,40304001,40303288,40302469,40302270,40302136,40301957,40299128,40298798,40298562,40298223,40297877,40297521,40296746,40296522,40296296,40295201,40294936,40294266,40293560,40292926,40292339,40292064,40291849,40291606,40291265,40291018,40290761,40290577,40290025,40289272,40287907	40307922,40304078,40303356,40302609,40302349,40302189,40302032,40299228,40298964,40298708,40298380,40297959,40297605,40296908,40296634,40296392,40295285,40295060,40294420,40293724,40293025,40292443,40292158,40291924,40291650,40291487,40291183,40290837,40290672,40290082,40289358,40288918	Gene ID= ENSG00000137841.11 TPM= 13.31 Transcript Type= protein_coding
chr15	40323664	40326715	40323664	40326715	+	ENST00000638170.1@INAFM2	ENST00000638170.1	protein_coding	40323664	40326715	Gene ID= ENSG00000259330.2 TPM= 137.78 Transcript Type= protein_coding
chr15	40331452	40340920	40331452	40340920	-	transcript620.chr15.nnic@C15orf52	transcript620.chr15.nnic	protein_coding	40340808,40339905,40339512,40338748,40338535,40337724,40337388,40336760,40336574,40331452	40340920,40340015,40339619,40338903,40338660,40337893,40337446,40336813,40336664,40335700	Gene ID= ENSG00000188549.12 TPM= 28.02 Transcript Type= NA
chr15	40331452	40340936	40331452	40340936	-	transcript622.chr15.nic@C15orf52	transcript622.chr15.nic	protein_coding	40340808,40339905,40339512,40338748,40338535,40337724,40337388,40336760,40331452	40340936,40340015,40339619,40338903,40338660,40337893,40337446,40336813,40336664	Gene ID= ENSG00000188549.12 TPM= 30.36 Transcript Type= NA
chr15	40358235	40378639	40358235	40378639	+	ENST00000267889.4@DISP2	ENST00000267889.4	protein_coding	40358235,40363625,40364226,40364421,40364838,40365147,40365628,40367058	40358440,40363954,40364255,40364544,40364953,40365274,40365725,40378639	Gene ID= ENSG00000140323.5 TPM= 2.34 Transcript Type= protein_coding
chr15	40382979	40394160	40382979	40394160	+	ENST00000561169.5@KNSTRN	ENST00000561169.5	protein_coding	40382979,40383228,40386362,40387159,40389489,40389836,40391493,40391949,40393469	40383044,40383322,40386494,40387206,40389611,40389929,40391554,40392023,40394160	Gene ID= ENSG00000128944.13 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr15	40405805	40418857	40405805	40418857	+	transcript640.chr15.nnic@IVD	transcript640.chr15.nnic	protein_coding	40405805,40407636,40407939,40410628,40411260,40411555,40412967,40414889,40415401,40416078,40416290,40418130	40405971,40407725,40407990,40410797,40411353,40411691,40413087,40414982,40415482,40416182,40416362,40418857	Gene ID= ENSG00000128928.8 TPM= 5.84 Transcript Type= NA
chr15	40405768	40435946	40405768	40435946	+	transcript648.chr15.nic@IVD	transcript648.chr15.nic	protein_coding	40405768,40407636,40407939,40410628,40411260,40411555,40412991,40414889,40415401,40416078,40416290,40435417	40405971,40407725,40407990,40410797,40411353,40411691,40413087,40414982,40415482,40416182,40416362,40435946	Gene ID= ENSG00000128928.8 TPM= 12.84 Transcript Type= NA
chr15	40405795	40418767	40405795	40418767	+	ENST00000487418.6@IVD	ENST00000487418.6	protein_coding	40405795,40407636,40407939,40410628,40411260,40411555,40412991,40414889,40415401,40416078,40416290,40418130	40405971,40407725,40407990,40410797,40411353,40411691,40413087,40414982,40415482,40416182,40416362,40418767	Gene ID= ENSG00000128928.8 TPM= 1.17 Transcript Type= protein_coding
chr15	40440912	40468229	40440912	40468229	+	transcript655.chr15.nic@BAHD1	transcript655.chr15.nic	protein_coding	40440912,40458451,40461912,40463861,40464471,40465344,40465941	40441268,40459896,40462294,40464020,40464547,40465435,40468229	Gene ID= ENSG00000140320.11 TPM= 35.03 Transcript Type= NA
chr15	40441212	40468242	40441212	40468242	+	ENST00000416165.5@BAHD1	ENST00000416165.5	protein_coding	40441212,40458451,40461912,40463861,40464471,40465335,40465941	40441268,40459896,40462294,40464020,40464547,40465435,40468242	Gene ID= ENSG00000140320.11 TPM= 36.2 Transcript Type= protein_coding
chr15	40470998	40474571	40470998	40474571	+	ENST00000306243.6@CHST14	ENST00000306243.6	protein_coding	40470998	40474571	Gene ID= ENSG00000169105.7 TPM= 2.34 Transcript Type= protein_coding
chr15	40553099	40565053	40553099	40565053	-	transcript661.chr15.nnic@CCDC32	transcript661.chr15.nnic	protein_coding	40564976,40562772,40557216,40553942,40553099	40565053,40563027,40557372,40554127,40553905	Gene ID= ENSG00000128891.15 TPM= 10.51 Transcript Type= NA
chr15	40553104	40565057	40553104	40565057	-	ENST00000416810.6@CCDC32	ENST00000416810.6	protein_coding	40564976,40562772,40557216,40553104	40565057,40563027,40557372,40554127	Gene ID= ENSG00000128891.15 TPM= 4.67 Transcript Type= protein_coding
chr15	40548496	40551809	40548496	40551809	-	transcript665.chr15.nnic@NA	transcript665.chr15.nnic	NA	40548496	40551809	Gene ID= novel_gene_chr15_666 TPM= 2.34 Transcript Type= NA
chr15	40569300	40574943	40569300	40574943	+	ENST00000315616.11@RPUSD2	ENST00000315616.11	protein_coding	40569300,40571604,40573527	40569943,40571900,40574943	Gene ID= ENSG00000166133.17 TPM= 18.68 Transcript Type= protein_coding
chr15	40691524	40695107	40691524	40695107	-	transcript676.chr15.nnic@RAD51-AS1	transcript676.chr15.nnic	processed_transcript	40695012,40693508,40691524	40695107,40694795,40692931	Gene ID= ENSG00000245849.6 TPM= 2.34 Transcript Type= NA
chr15	40693741	40695107	40693741	40695107	-	ENST00000499988.2@RAD51-AS1	ENST00000499988.2	processed_transcript	40695012,40693741	40695107,40694795	Gene ID= ENSG00000245849.6 TPM= 1.17 Transcript Type= retained_intron
chr15	40687426	40691390	40687426	40691390	+	transcript679.chr15.nnic@NA	transcript679.chr15.nnic	NA	40687426	40691390	Gene ID= novel_gene_chr15_680 TPM= 16.35 Transcript Type= NA
chr15	40735888	40755282	40735888	40755282	-	transcript687.chr15.nic@RMDN3	transcript687.chr15.nic	protein_coding	40755199,40754597,40751986,40751426,40744977,40744047,40740133,40738501,40737965,40737628,40737288,40737124,40735888	40755282,40754790,40752178,40751569,40745259,40744149,40740193,40738576,40738042,40737726,40737341,40737204,40736594	Gene ID= ENSG00000137824.15 TPM= 47.96 Transcript Type= NA
chr15	40735888	40755260	40735888	40755260	-	ENST00000338376.7@RMDN3	ENST00000338376.7	protein_coding	40755083,40754597,40751986,40751426,40744977,40744047,40740133,40738501,40737965,40737628,40737288,40737124,40735888	40755260,40754790,40752178,40751569,40745259,40744149,40740193,40738576,40738042,40737726,40737341,40737204,40736594	Gene ID= ENSG00000137824.15 TPM= 176.4 Transcript Type= protein_coding
chr15	40747095	40750289	40747095	40750289	+	transcript695.chr15.nnic@NA	transcript695.chr15.nnic	NA	40747095	40750289	Gene ID= novel_gene_chr15_696 TPM= 2.34 Transcript Type= NA
chr15	40764020	40767710	40764020	40767710	+	ENST00000260447.5@GCHFR	ENST00000260447.5	protein_coding	40764020,40765827,40767226	40764216,40765921,40767710	Gene ID= ENSG00000137880.5 TPM= 69.47 Transcript Type= protein_coding
chr15	40765620	40767708	40765620	40767708	+	ENST00000558467.1@GCHFR	ENST00000558467.1	protein_coding	40765620,40767226	40765921,40767708	Gene ID= ENSG00000137880.5 TPM= 11.09 Transcript Type= protein_coding
chr15	40765155	40807477	40765155	40807477	-	ENST00000220496.8@DNAJC17	ENST00000220496.8	protein_coding	40807369,40779928,40779545,40779223,40776542,40776196,40775553,40775031,40774356,40773727,40765155	40807477,40779997,40779603,40779310,40776627,40776292,40775596,40775108,40774436,40773837,40768062	Gene ID= ENSG00000104129.9 TPM= 1.17 Transcript Type= protein_coding
chr15	40772960	40807480	40772960	40807480	-	transcript714.chr15.nic@DNAJC17	transcript714.chr15.nic	protein_coding	40807369,40779928,40779545,40779223,40776542,40776196,40775553,40775031,40774356,40772960	40807480,40779997,40779603,40779310,40776627,40776401,40775596,40775108,40774436,40773837	Gene ID= ENSG00000104129.9 TPM= 2.34 Transcript Type= NA
chr15	40767872	40773200	40767872	40773200	-	transcript724.chr15.nnic@NA	transcript724.chr15.nnic	NA	40767872	40773200	Gene ID= novel_gene_chr15_725 TPM= 3.5 Transcript Type= NA
chr15	40807089	40815084	40807089	40815084	+	ENST00000355341.8@ZFYVE19	ENST00000355341.8	protein_coding	40807089,40809119,40809408,40809852,40810071,40810649,40812699,40813338,40813713,40813943,40814148	40807868,40809240,40809458,40809970,40810216,40810757,40812902,40813417,40813811,40814070,40815084	Gene ID= ENSG00000166140.17 TPM= 18.68 Transcript Type= protein_coding
chr15	40807089	40814569	40807089	40814569	+	transcript708.chr15.nic@ZFYVE19	transcript708.chr15.nic	protein_coding	40807089,40809119,40809408,40809852,40810071,40810649,40812699,40813338,40813713,40813943	40807868,40809240,40809458,40809970,40810216,40810757,40812902,40813417,40813811,40814569	Gene ID= ENSG00000166140.17 TPM= 2.34 Transcript Type= NA
chr15	40807089	40814565	40807089	40814565	+	transcript710.chr15.nic@ZFYVE19	transcript710.chr15.nic	protein_coding	40807089,40809408,40809852,40810071,40810649,40812699,40813338,40813713,40813943,40814148	40809240,40809458,40809970,40810216,40810757,40812902,40813417,40813811,40814070,40814565	Gene ID= ENSG00000166140.17 TPM= 8.17 Transcript Type= NA
chr15	40807089	40814565	40807089	40814565	+	ENST00000564258.5@ZFYVE19	ENST00000564258.5	protein_coding	40807089,40809119,40809408,40809852,40810071,40810649,40812699,40813338,40813713,40813943,40814148	40807671,40809240,40809458,40809970,40810216,40810757,40812902,40813417,40813811,40814070,40814565	Gene ID= ENSG00000166140.17 TPM= 2.92 Transcript Type= protein_coding
chr15	40807590	40814569	40807590	40814569	+	ENST00000299173.14@ZFYVE19	ENST00000299173.14	protein_coding	40807590,40809119,40809408,40809852,40810071,40810649,40813338,40813713,40813943,40814148	40807868,40809240,40809458,40809970,40810216,40810757,40813417,40813811,40814070,40814569	Gene ID= ENSG00000166140.17 TPM= 2.92 Transcript Type= protein_coding
chr15	40835993	40844387	40835993	40844387	-	ENST00000564302.5@SPINT1-AS1	ENST00000564302.5	antisense_RNA	40844179,40838543,40835993	40844387,40838686,40836282	Gene ID= ENSG00000261183.5 TPM= 2.34 Transcript Type= antisense_RNA
chr15	40844168	40857655	40844168	40857655	+	transcript734.chr15.nic@SPINT1	transcript734.chr15.nic	protein_coding	40844168,40844490,40853124,40853489,40853711,40854060,40854397,40854639,40855892,40856276,40856770	40844278,40845029,40853251,40853627,40853929,40854086,40854522,40854689,40856062,40856323,40857655	Gene ID= ENSG00000166145.14 TPM= 26.97 Transcript Type= NA
chr15	40844172	40857655	40844172	40857655	+	transcript742.chr15.nic@SPINT1	transcript742.chr15.nic	protein_coding	40844172,40853124,40853489,40853711,40854060,40854397,40854639,40855892,40856276,40856770	40845029,40853251,40853627,40853929,40854086,40854522,40854689,40856062,40856323,40857655	Gene ID= ENSG00000166145.14 TPM= 45.65 Transcript Type= NA
chr15	40844018	40857655	40844018	40857655	+	ENST00000562057.5@SPINT1	ENST00000562057.5	protein_coding	40844018,40844490,40853124,40853489,40853711,40854060,40854397,40854639,40855892,40856276,40856770	40844186,40845029,40853251,40853627,40853881,40854086,40854522,40854689,40856062,40856323,40857655	Gene ID= ENSG00000166145.14 TPM= 155.41 Transcript Type= protein_coding
chr15	40894430	40903975	40894430	40903975	+	ENST00000220509.9@VPS18	ENST00000220509.9	protein_coding	40894430,40895938,40898907,40899144,40902616	40894859,40896079,40898998,40901014,40903975	Gene ID= ENSG00000104142.10 TPM= 75.89 Transcript Type= protein_coding
chr15	40929340	40939072	40929340	40939072	+	transcript757.chr15.nic@DLL4	transcript757.chr15.nic	protein_coding	40929340,40930625,40931503,40932171,40932317,40934548,40934898,40936228,40937418,40938029	40930116,40930682,40931766,40932231,40932447,40934717,40935117,40936930,40937526,40939072	Gene ID= ENSG00000128917.6 TPM= 9.34 Transcript Type= NA
chr15	40929393	40939072	40929393	40939072	+	ENST00000249749.6@DLL4	ENST00000249749.6	protein_coding	40929393,40929847,40930625,40931503,40932171,40932317,40934548,40934898,40936228,40937418,40938029	40929734,40930116,40930682,40931766,40932231,40932447,40934717,40935117,40936930,40937526,40939072	Gene ID= ENSG00000128917.6 TPM= 40.87 Transcript Type= protein_coding
chr15	40978880	41116493	40978880	41116493	-	transcript770.chr15.nic@INO80	transcript770.chr15.nic	protein_coding	41115973,41096168,41095759,41095601,41092027,41087562,41085369,41081020,41079701,41074370,41073428,41071849,41070467,41069570,41059867,41056622,41055247,41053929,41049935,41049287,41048212,41047408,41044904,41027596,41020900,41016088,41005593,40997529,40987816,40987091,40985338,40984197,40983762,40982862,40978880	41116493,41096353,41095928,41095668,41092182,41087682,41085583,41081073,41079904,41074565,41073495,41072058,41070547,41069665,41059926,41056706,41055364,41054014,41050102,41049420,41048276,41047501,41045075,41027736,41021125,41016215,41005687,40997601,40987974,40987193,40985426,40984352,40983921,40983077,40980440	Gene ID= ENSG00000128908.15 TPM= 10.51 Transcript Type= NA
chr15	40985349	41116018	40985349	41116018	-	transcript771.chr15.nic@INO80	transcript771.chr15.nic	protein_coding	41115973,41096168,41095759,41095601,41092027,41087562,41085369,41081020,41079701,41074370,41073428,41071849,41070467,41069570,41059867,41058639,41056622,41055247,41053929,41049935,41049287,41048212,41047408,41044904,41027596,41020900,41016088,41005593,40997529,40987816,40987091,40985349	41116018,41096353,41095928,41095668,41092182,41087682,41085583,41081073,41079904,41074565,41073495,41072058,41070547,41069665,41059926,41058781,41056706,41055364,41054014,41050102,41049420,41048276,41047501,41045075,41027736,41021125,41016215,41005687,40997601,40987974,40987193,40985426	Gene ID= ENSG00000128908.15 TPM= 2.34 Transcript Type= NA
chr15	41071449	41116269	41071449	41116269	-	transcript775.chr15.nic@INO80	transcript775.chr15.nic	protein_coding	41115973,41096168,41095759,41095601,41092027,41087562,41085369,41081020,41079701,41074370,41073428,41071449	41116269,41096353,41095928,41095668,41092182,41087682,41085583,41081073,41079904,41074565,41073495,41072058	Gene ID= ENSG00000128908.15 TPM= 2.34 Transcript Type= NA
chr15	41231143	41281890	41231143	41281890	+	ENST00000334660.9@CHP1	ENST00000334660.9	protein_coding	41231143,41243667,41256910,41262756,41270557,41278767,41279336	41231449,41243739,41256990,41262883,41270618,41278889,41281890	Gene ID= ENSG00000187446.11 TPM= 108.59 Transcript Type= protein_coding
chr15	41283961	41301999	41283961	41301999	+	transcript793.chr15.nnic@OIP5-AS1	transcript793.chr15.nnic	processed_transcript	41283961,41285225,41286011,41298041,41299239	41284110,41285363,41286100,41298781,41301999	Gene ID= ENSG00000247556.6 TPM= 11.68 Transcript Type= NA
chr15	41332871	41381050	41332871	41381050	+	ENST00000414849.6@NUSAP1	ENST00000414849.6	protein_coding	41332871,41342386,41349098,41350988,41356039,41358149,41365405,41371527,41375712,41377196,41380093	41333050,41342454,41349241,41351129,41356140,41358258,41365589,41371684,41375828,41377304,41381050	Gene ID= ENSG00000137804.12 TPM= 8.17 Transcript Type= protein_coding
chr15	41387349	41402515	41387349	41402515	-	transcript813.chr15.nic@NDUFAF1	transcript813.chr15.nic	protein_coding	41402447,41396487,41394859,41388448,41387349	41402515,41397140,41395044,41388522,41387593	Gene ID= ENSG00000137806.8 TPM= 10.51 Transcript Type= NA
chr15	41394020	41402471	41394020	41402471	-	transcript818.chr15.nic@NDUFAF1	transcript818.chr15.nic	protein_coding	41402144,41396487,41394859,41394020	41402471,41397140,41395044,41394358	Gene ID= ENSG00000137806.8 TPM= 3.5 Transcript Type= NA
chr15	41387349	41402444	41387349	41402444	-	ENST00000260361.8@NDUFAF1	ENST00000260361.8	protein_coding	41402144,41396487,41394859,41388448,41387349	41402444,41397140,41395044,41388522,41387593	Gene ID= ENSG00000137806.8 TPM= 3.5 Transcript Type= protein_coding
chr15	41417088	41478425	41417088	41478425	+	transcript824.chr15.nic@RTF1	transcript824.chr15.nic	protein_coding	41417088,41438321,41452901,41457672,41464771,41466141,41470257,41471172,41474620,41475525,41475712,41476446,41477165,41477458	41417313,41438431,41453048,41457876,41464885,41466252,41470392,41471349,41474702,41475612,41475819,41476523,41477286,41478425	Gene ID= ENSG00000137815.14 TPM= 2.34 Transcript Type= NA
chr15	41417088	41478425	41417088	41478425	+	transcript826.chr15.nic@RTF1	transcript826.chr15.nic	protein_coding	41417088,41438321,41452901,41457672,41464771,41466141,41470257,41471172,41474620,41475712,41476446,41477165,41477458	41417313,41438431,41453048,41457876,41464885,41466252,41470392,41471349,41475612,41475819,41476523,41477286,41478425	Gene ID= ENSG00000137815.14 TPM= 2.34 Transcript Type= NA
chr15	41417104	41483563	41417104	41483563	+	ENST00000389629.8@RTF1	ENST00000389629.8	protein_coding	41417104,41438321,41452901,41457672,41464771,41466141,41470257,41471172,41474620,41475525,41475712,41476446,41477165,41477458,41478548,41479103,41480214,41480581	41417313,41438431,41453048,41457876,41464885,41466252,41470392,41471349,41474702,41475612,41475819,41476523,41477286,41477515,41478625,41479198,41480325,41483563	Gene ID= ENSG00000137815.14 TPM= 11.68 Transcript Type= protein_coding
chr15	41503642	41513865	41503642	41513865	-	transcript841.chr15.nic@LTK	transcript841.chr15.nic	protein_coding	41513667,41512977,41512707,41512115,41511817,41511422,41511164,41509031,41508069,41507514,41507095,41505915,41505713,41505401,41505208,41504972,41504773,41504506,41504342,41503642	41513865,41513120,41512878,41512265,41511963,41511578,41511346,41509129,41508221,41507657,41507290,41506005,41505777,41505530,41505305,41505064,41504874,41504640,41504432,41504244	Gene ID= ENSG00000062524.15 TPM= 3.79 Transcript Type= NA
chr15	41503642	41513865	41503642	41513865	-	transcript845.chr15.nic@LTK	transcript845.chr15.nic	protein_coding	41513667,41512977,41512707,41511817,41511422,41511164,41509031,41508069,41507562,41507095,41505915,41505713,41505401,41505208,41504972,41504773,41504506,41504342,41503642	41513865,41513120,41512878,41512265,41511578,41511346,41509129,41508221,41507657,41507290,41506005,41505777,41505530,41505305,41505064,41504874,41504640,41504432,41504244	Gene ID= ENSG00000062524.15 TPM= 8.47 Transcript Type= NA
chr15	41503642	41513865	41503642	41513865	-	transcript846.chr15.nic@LTK	transcript846.chr15.nic	protein_coding	41513667,41512977,41512707,41512115,41511817,41511422,41511164,41509031,41508069,41507095,41505915,41505713,41505401,41505208,41504972,41504773,41504506,41504342,41503642	41513865,41513120,41512878,41512265,41511963,41511578,41511346,41509129,41508221,41507657,41506005,41505777,41505530,41505305,41505064,41504874,41504640,41504432,41504244	Gene ID= ENSG00000062524.15 TPM= 6.13 Transcript Type= NA
chr15	41503642	41513806	41503642	41513806	-	ENST00000263800.10@LTK	ENST00000263800.10	protein_coding	41513667,41512977,41512707,41512115,41511817,41511422,41511164,41509031,41508069,41507562,41507095,41505915,41505713,41505401,41505208,41504972,41504773,41504506,41504342,41503642	41513806,41513120,41512878,41512265,41511963,41511578,41511346,41509129,41508221,41507657,41507290,41506005,41505777,41505530,41505305,41505064,41504874,41504640,41504432,41504244	Gene ID= ENSG00000062524.15 TPM= 13.14 Transcript Type= protein_coding
chr15	41517176	41522849	41517176	41522849	-	transcript862.chr15.nic@RPAP1	transcript862.chr15.nic	protein_coding	41520391,41518006,41517798,41517176	41522849,41518182,41517857,41517691	Gene ID= ENSG00000103932.11 TPM= 9.34 Transcript Type= NA
chr15	41660412	41769943	41660412	41769943	+	ENST00000219905.11@MGA	ENST00000219905.11	protein_coding	41660412,41668828,41696075,41698863,41699064,41707728,41708104,41710691,41713151,41727180,41729164,41734522,41736181,41740053,41742546,41748637,41749111,41754437,41757788,41760323,41761739,41762129,41764886,41766004	41660525,41669958,41697023,41698941,41699159,41707859,41708208,41711349,41713496,41727406,41729349,41734594,41736698,41740203,41743172,41748927,41750615,41754567,41757839,41760529,41761850,41762362,41765062,41769943	Gene ID= ENSG00000174197.16 TPM= 8.17 Transcript Type= protein_coding
chr15	41828085	41837581	41828085	41837581	+	ENST00000397299.8@JMJD7	ENST00000397299.8	protein_coding	41828085,41834740,41834970,41835588,41836148,41836475,41836781,41837068	41828188,41834893,41835223,41835644,41836243,41836551,41836940,41837581	Gene ID= ENSG00000243789.10 TPM= 68.89 Transcript Type= protein_coding
chr15	41828116	41848143	41828116	41848143	+	ENST00000382448.8@JMJD7-PLA2G4B	ENST00000382448.8	protein_coding	41828116,41834740,41834970,41835588,41836148,41836475,41840158,41840524,41840774,41841055,41841231,41841517,41841819,41842193,41842554,41843676,41844471,41844848,41845203,41845638,41845943,41846203,41846669,41847337,41847649	41828188,41834893,41835223,41835644,41836243,41836551,41840230,41840660,41840905,41841095,41841273,41841571,41841949,41842276,41842591,41843811,41844607,41845070,41845320,41845775,41846047,41846382,41846835,41847523,41848143	Gene ID= ENSG00000168970.22 TPM= 8.17 Transcript Type= protein_coding
chr15	41828095	41848155	41828095	41848155	+	ENST00000490848.5@JMJD7-PLA2G4B	ENST00000490848.5	protein_coding	41828095,41834740,41834970,41835588,41836148,41836475,41837068,41840524,41840774,41841055,41841231,41841517,41841819,41842193,41843126,41843676,41844471,41844848,41845203,41845638,41845943,41846203,41846669,41847337,41847649	41828188,41834893,41835223,41835644,41836243,41836940,41840230,41840660,41840905,41841095,41841273,41841571,41841949,41842591,41843223,41843811,41844607,41845070,41845320,41845775,41846047,41846382,41846835,41847523,41848155	Gene ID= ENSG00000168970.22 TPM= 14.01 Transcript Type= retained_intron
chr15	41848144	41894077	41848144	41894077	-	ENST00000320955.7@SPTBN5	ENST00000320955.7	protein_coding	41893899,41893282,41892894,41890089,41887928,41887213,41885735,41883348,41882996,41882585,41882269,41881936,41881034,41880160,41879734,41879260,41878342,41877116,41876809,41876548,41876114,41875458,41874842,41874292,41873845,41873492,41872302,41871782,41871375,41870446,41870243,41869841,41868398,41868069,41867538,41866959,41866344,41866038,41865808,41863909,41863704,41862790,41862539,41862130,41861735,41861419,41860586,41858890,41858602,41857573,41857238,41856853,41856386,41855549,41855224,41854782,41854050,41853582,41853258,41852824,41852634,41852182,41851779,41851283,41851059,41850854,41849869,41848144	41894077,41893546,41893061,41890205,41888085,41887441,41886366,41883486,41883228,41882738,41882469,41882145,41881234,41880312,41879864,41879499,41878629,41877356,41876948,41876647,41876284,41875622,41875056,41874478,41874045,41873608,41872459,41871917,41871520,41870560,41870353,41870020,41868601,41868218,41867642,41867126,41866493,41866229,41865903,41864024,41863818,41862903,41862660,41862292,41861923,41861496,41860758,41858980,41858748,41857710,41857494,41857039,41856598,41855745,41855428,41854976,41854205,41853787,41853447,41853000,41852735,41852316,41851850,41851369,41851150,41850939,41849959,41848628	Gene ID= ENSG00000137877.9 TPM= 4.67 Transcript Type= protein_coding
chr15	41895939	41972578	41895939	41972578	-	ENST00000220325.8@EHD4	ENST00000220325.8	protein_coding	41972259,41953764,41943067,41919210,41909699,41895939	41972578,41953940,41943164,41919622,41909863,41901181	Gene ID= ENSG00000103966.10 TPM= 28.02 Transcript Type= protein_coding
chr15	41941604	41972552	41941604	41972552	-	ENST00000569223.1@EHD4	ENST00000569223.1	protein_coding	41972259,41953764,41941604	41972552,41953940,41943164	Gene ID= ENSG00000103966.10 TPM= 10.51 Transcript Type= retained_intron
chr15	41919389	41925072	41919389	41925072	+	transcript910.chr15.nnic@NA	transcript910.chr15.nnic	NA	41919389	41925072	Gene ID= novel_gene_chr15_911 TPM= 2.34 Transcript Type= NA
chr15	41968455	41972415	41968455	41972415	-	transcript912.chr15.nnic@NA	transcript912.chr15.nnic	NA	41968455	41972415	Gene ID= novel_gene_chr15_913 TPM= 2.34 Transcript Type= NA
chr15	42139034	42156636	42139034	42156636	-	ENST00000397272.7@PLA2G4F	ENST00000397272.7	protein_coding	42156439,42155517,42154322,42154092,42153620,42153300,42152688,42150608,42150373,42150104,42149713,42147626,42147124,42146127,42145766,42145575,42144450,42143978,42142528,42139034	42156636,42155589,42154458,42154220,42153660,42153342,42152754,42150777,42150486,42150141,42149848,42147762,42147346,42146241,42145903,42145682,42144644,42144144,42142714,42142204	Gene ID= ENSG00000168907.13 TPM= 9.34 Transcript Type= protein_coding
chr15	42145788	42148197	42145788	42148197	+	transcript929.chr15.nnic@NA	transcript929.chr15.nnic	NA	42145788	42148197	Gene ID= novel_gene_chr15_930 TPM= 28.02 Transcript Type= NA
chr15	42183265	42208326	42183265	42208326	-	transcript946.chr15.nic@VPS39	transcript946.chr15.nic	protein_coding	42208081,42199896,42191496,42191125,42189114,42187758,42187271,42183265	42208326,42199961,42191560,42191167,42189208,42187856,42187363,42184700	Gene ID= ENSG00000166887.15 TPM= 7.01 Transcript Type= NA
chr15	42158701	42208316	42158701	42208316	-	ENST00000318006.9@VPS39	ENST00000318006.9	protein_coding	42208081,42199896,42191496,42191125,42189114,42187758,42187271,42184517,42178450,42178218,42173723,42169724,42167394,42166772,42166563,42166159,42165718,42164996,42164358,42163626,42163350,42162332,42162032,42161682,42158701	42208316,42199961,42191560,42191167,42189208,42187856,42187363,42184700,42178570,42178338,42173852,42169866,42167537,42166913,42166649,42166232,42165816,42165113,42164486,42163728,42163395,42162481,42162166,42161773,42160829	Gene ID= ENSG00000166887.15 TPM= 108 Transcript Type= protein_coding
chr15	42210532	42273663	42210532	42273663	-	ENST00000389834.8@TMEM87A	ENST00000389834.8	protein_coding	42273255,42272063,42267947,42264090,42261196,42260958,42244050,42239670,42237432,42236320,42233213,42231192,42228712,42227711,42226806,42220062,42219581,42218323,42217803,42210532	42273663,42272123,42268032,42264203,42261249,42261002,42244167,42239731,42237615,42236419,42233306,42231260,42228820,42227769,42226909,42220135,42219642,42218378,42217833,42211749	Gene ID= ENSG00000103978.15 TPM= 49.04 Transcript Type= protein_coding
chr15	42210532	42273586	42210532	42273586	-	transcript959.chr15.nic@TMEM87A	transcript959.chr15.nic	protein_coding	42273255,42272063,42267947,42264090,42261196,42260958,42244050,42239670,42237432,42236320,42233213,42231844,42228712,42227711,42226806,42220062,42219581,42218323,42217803,42210532	42273586,42272123,42268032,42264203,42261249,42261002,42244167,42239731,42237615,42236419,42233306,42231915,42228820,42227769,42226909,42220135,42219642,42218378,42217833,42211749	Gene ID= ENSG00000103978.15 TPM= 8.17 Transcript Type= NA
chr15	42210452	42273584	42210452	42273584	-	ENST00000448392.5@TMEM87A	ENST00000448392.5	protein_coding	42273255,42267947,42264090,42261196,42260958,42244050,42239670,42237432,42236320,42233213,42231192,42228712,42227711,42226806,42220062,42219581,42218323,42217803,42210452	42273584,42268032,42264203,42261249,42261002,42244167,42239731,42237615,42236419,42233306,42231260,42228820,42227769,42226909,42220135,42219642,42218378,42217833,42211749	Gene ID= ENSG00000103978.15 TPM= 1.17 Transcript Type= protein_coding
chr15	42257935	42273436	42257935	42273436	-	ENST00000307216.10@TMEM87A	ENST00000307216.10	protein_coding	42273255,42272063,42267947,42264090,42261196,42260958,42257935	42273436,42272123,42268032,42264203,42261249,42261002,42258990	Gene ID= ENSG00000103978.15 TPM= 1.17 Transcript Type= protein_coding
chr15	42273542	42314829	42273542	42314829	+	transcript985.chr15.nnic@GANC	transcript985.chr15.nnic	protein_coding	42273542,42274168,42276348,42278482,42287691,42292735,42297611,42306546,42308222,42310283,42310693,42313882	42273611,42274510,42276410,42278590,42287818,42292917,42297656,42306612,42308318,42310463,42310846,42314829	Gene ID= ENSG00000214013.9 TPM= 2.34 Transcript Type= NA
chr15	42404779	42412315	42404779	42412315	+	ENST00000337571.8@CAPN3	ENST00000337571.8	protein_coding	42404779,42409303,42409787,42409931,42410428,42410588,42410884,42411287,42411747	42404955,42409380,42409844,42409995,42410496,42410666,42411000,42411345,42412315	Gene ID= ENSG00000092529.23 TPM= 2.34 Transcript Type= protein_coding
chr15	42446626	42491134	42446626	42491134	-	transcript1005.chr15.nnic@ZNF106	transcript1005.chr15.nnic	protein_coding	42490980,42472236,42466053,42456958,42454774,42449771,42448072,42446626	42491134,42472321,42466114,42457158,42454891,42451954,42448705,42446658	Gene ID= ENSG00000103994.16 TPM= 3.89 Transcript Type= NA
chr15	42446626	42491545	42446626	42491545	-	transcript1006.chr15.nic@ZNF106	transcript1006.chr15.nic	protein_coding	42490980,42472236,42466053,42456958,42449771,42448072,42446626	42491545,42472321,42466114,42457158,42451954,42448705,42446658	Gene ID= ENSG00000103994.16 TPM= 31.91 Transcript Type= NA
chr15	42446626	42457532	42446626	42457532	-	transcript1010.chr15.nic@ZNF106	transcript1010.chr15.nic	protein_coding	42456958,42449771,42448072,42446626	42457532,42451954,42448705,42446658	Gene ID= ENSG00000103994.16 TPM= 5.06 Transcript Type= NA
chr15	42412823	42457532	42412823	42457532	-	ENST00000263805.8@ZNF106	ENST00000263805.8	protein_coding	42456958,42449771,42448072,42446589,42444827,42444202,42442073,42439033,42438612,42437232,42435384,42428018,42424834,42423998,42422501,42421917,42421061,42417805,42412823	42457532,42451954,42448705,42446658,42444981,42444262,42442414,42439813,42438667,42437377,42435518,42428134,42425025,42424060,42422620,42421988,42421132,42417951,42417360	Gene ID= ENSG00000103994.16 TPM= 53.71 Transcript Type= protein_coding
chr15	42415121	42491105	42415121	42491105	-	ENST00000565380.5@ZNF106	ENST00000565380.5	protein_coding	42490980,42472236,42466053,42448072,42446589,42444827,42444202,42442073,42439033,42438612,42437232,42435384,42428018,42424834,42423998,42422501,42421917,42421061,42417805,42415121	42491105,42472321,42466114,42448705,42446658,42444981,42444262,42442414,42439813,42438667,42437377,42435518,42428134,42425025,42424060,42422620,42421988,42421132,42417951,42417360	Gene ID= ENSG00000103994.16 TPM= 16.35 Transcript Type= protein_coding
chr15	42495260	42533061	42495260	42533061	+	ENST00000249647.7@SNAP23	ENST00000249647.7	protein_coding	42495260,42511833,42512955,42513399,42515237,42528262,42529675,42531413	42495713,42511903,42512996,42513447,42515354,42528420,42529819,42533061	Gene ID= ENSG00000092531.9 TPM= 188.47 Transcript Type= protein_coding
chr15	42495306	42533059	42495306	42533059	+	ENST00000349777.5@SNAP23	ENST00000349777.5	protein_coding	42495306,42511833,42512955,42513399,42515237,42529675,42531413	42495713,42511903,42512996,42513447,42515354,42529819,42533059	Gene ID= ENSG00000092531.9 TPM= 3.12 Transcript Type= protein_coding
chr15	42495607	42533059	42495607	42533059	+	transcript1026.chr15.nic@SNAP23	transcript1026.chr15.nic	protein_coding	42495607,42511833,42512955,42515237,42528262,42529675,42531413	42495713,42511903,42513447,42515354,42528420,42529819,42533059	Gene ID= ENSG00000092531.9 TPM= 13.33 Transcript Type= NA
chr15	42542522	42548789	42542522	42548789	-	transcript1054.chr15.nic@LRRC57	transcript1054.chr15.nic	protein_coding	42548693,42548351,42548106,42547261,42542522	42548789,42548456,42548244,42547529,42545262	Gene ID= ENSG00000180979.9 TPM= 2.34 Transcript Type= NA
chr15	42542522	42548773	42542522	42548773	-	ENST00000397130.7@LRRC57	ENST00000397130.7	protein_coding	42548693,42548351,42548106,42547261,42545077,42542522	42548773,42548456,42548244,42547529,42545262,42544124	Gene ID= ENSG00000180979.9 TPM= 15.18 Transcript Type= protein_coding
chr15	42548838	42568930	42548838	42568930	+	ENST00000391623.8@HAUS2	ENST00000391623.8	protein_coding	42548838,42559339,42560782,42561270,42563749,42566607	42548965,42559408,42560870,42561402,42563857,42568930	Gene ID= ENSG00000137814.10 TPM= 1.75 Transcript Type= nonsense_mediated_decay
chr15	42548810	42569994	42548810	42569994	+	ENST00000260372.7@HAUS2	ENST00000260372.7	protein_coding	42548810,42558198,42559339,42561270,42563749,42566607	42548965,42558290,42559408,42561402,42563857,42569994	Gene ID= ENSG00000137814.10 TPM= 13.43 Transcript Type= protein_coding
chr15	42575659	42720981	42575659	42720981	+	ENST00000290607.11@STARD9	ENST00000290607.11	protein_coding	42575659,42583346,42585521,42634856,42637907,42638026,42638700,42651016,42652520,42661158,42662794,42663281,42663820,42665253,42665786,42669158,42674440,42674827,42675664,42675872,42681422,42682104,42684116,42694528,42695140,42695743,42716677,42716927,42717731,42717977,42718435,42718752,42719473	42575762,42583415,42585637,42634972,42637939,42638087,42638812,42651085,42652592,42661225,42662891,42663490,42663917,42665330,42665848,42669337,42674491,42674964,42675746,42675975,42681612,42682575,42694342,42694725,42695323,42695880,42716764,42717048,42717795,42718179,42718514,42718910,42720981	Gene ID= ENSG00000159433.11 TPM= 8.17 Transcript Type= protein_coding
chr15	42723562	42737126	42723562	42737126	-	ENST00000356231.3@CDAN1	ENST00000356231.3	protein_coding	42737013,42736302,42735875,42735510,42735261,42735100,42734226,42733938,42733097,42732333,42731620,42731211,42730925,42730598,42730128,42729796,42729568,42729229,42729023,42728652,42728204,42727955,42727621,42726310,42726097,42725489,42725144,42723562	42737126,42736780,42736078,42735679,42735374,42735178,42734346,42734047,42733186,42732408,42731825,42731331,42731071,42730764,42730215,42729885,42729622,42729362,42729126,42728810,42728267,42728033,42727769,42726417,42726160,42725670,42725251,42724616	Gene ID= ENSG00000140326.12 TPM= 9.34 Transcript Type= protein_coding
chr15	42942897	43106101	42942897	43106101	-	ENST00000290650.8@UBR1	ENST00000290650.8	protein_coding	43105942,43085984,43082638,43074979,43070795,43067898,43060052,43059702,43059085,43058341,43056344,43054742,43048392,43047161,43043215,43038171,43037773,43036528,43036178,43032568,43029944,43027776,43026561,43025381,43024829,43022702,43021275,43017095,43015688,43007079,43003837,43002555,42998168,42990030,42988819,42984887,42983897,42977880,42976717,42970520,42966153,42963935,42960645,42958013,42952278,42950262,42942897	43106101,43086240,43082716,43075089,43070925,43068036,43060114,43059825,43059192,43058429,43056442,43054899,43048491,43047289,43043395,43038232,43037883,43036593,43036279,43032631,43030068,43027828,43026663,43025429,43024983,43022801,43021375,43017181,43015869,43007284,43003930,43002704,42998265,42990120,42988967,42984942,42983993,42977947,42976867,42970607,42966286,42964043,42960701,42958090,42952448,42950363,42945470	Gene ID= ENSG00000159459.11 TPM= 14.01 Transcript Type= protein_coding
chr15	43133524	43185146	43133524	43185146	+	ENST00000260403.6@TMEM62	ENST00000260403.6	protein_coding	43133524,43134257,43135512,43138574,43146493,43148755,43149029,43151790,43154672,43160681,43169593,43178607,43181181,43184260	43133982,43134368,43135649,43138619,43146634,43148879,43149151,43151945,43154831,43160794,43169677,43178711,43181299,43185146	Gene ID= ENSG00000137842.6 TPM= 12.26 Transcript Type= protein_coding
chr15	43133553	43185146	43133553	43185146	+	transcript1083.chr15.nic@TMEM62	transcript1083.chr15.nic	protein_coding	43133553,43134257,43135512,43138574,43146493,43148755,43149029,43151790,43154672,43160681,43169593,43181181,43184260	43133982,43134368,43135649,43138619,43146634,43148879,43149151,43151945,43154831,43160794,43169677,43181299,43185146	Gene ID= ENSG00000137842.6 TPM= 4.09 Transcript Type= NA
chr15	43185257	43197176	43185257	43197176	+	ENST00000300213.8@CCNDBP1	ENST00000300213.8	protein_coding	43185257,43185820,43186154,43189199,43190055,43190325,43190966,43191395,43192743,43194415,43194727	43185607,43185879,43186233,43189280,43190151,43190398,43191042,43191675,43192803,43194461,43197176	Gene ID= ENSG00000166946.13 TPM= 3.5 Transcript Type= protein_coding
chr15	43185328	43195164	43185328	43195164	+	ENST00000566515.5@CCNDBP1	ENST00000566515.5	protein_coding	43185328,43185820,43186154,43189199,43190055,43190325,43190966,43191395,43192743,43194081,43194415,43194727	43185607,43185879,43186233,43189280,43190151,43190398,43191042,43191675,43192803,43194137,43194461,43195164	Gene ID= ENSG00000166946.13 TPM= 12.84 Transcript Type= nonsense_mediated_decay
chr15	43185439	43195180	43185439	43195180	+	ENST00000568507.5@CCNDBP1	ENST00000568507.5	protein_coding	43185439,43185820,43186154,43189199,43190325,43190966,43191395,43192743,43194415,43194727	43185607,43185879,43186233,43189280,43190398,43191042,43191675,43192803,43194461,43195180	Gene ID= ENSG00000166946.13 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr15	43185406	43195195	43185406	43195195	+	ENST00000563065.5@CCNDBP1	ENST00000563065.5	protein_coding	43185406,43185820,43189199,43190055,43190325,43190966,43191395,43192743,43194415,43194727	43185607,43185879,43189280,43190151,43190398,43191042,43191675,43192803,43194461,43195195	Gene ID= ENSG00000166946.13 TPM= 1.75 Transcript Type= nonsense_mediated_decay
chr15	43185439	43195195	43185439	43195195	+	ENST00000565296.5@CCNDBP1	ENST00000565296.5	protein_coding	43185439,43185820,43186154,43189199,43190055,43190325,43190966,43191395,43192743,43194081,43194727	43185607,43185879,43186233,43189280,43190151,43190398,43191042,43191675,43192803,43194461,43195195	Gene ID= ENSG00000166946.13 TPM= 2.92 Transcript Type= nonsense_mediated_decay
chr15	43327776	43330622	43327776	43330622	-	transcript1108.chr15.nnic@NA	transcript1108.chr15.nnic	NA	43327776	43330622	Gene ID= novel_gene_chr15_1109 TPM= 10.51 Transcript Type= NA
chr15	43330674	43353898	43330674	43353898	+	ENST00000428046.7@ADAL	ENST00000428046.7	protein_coding	43330674,43331900,43333311,43334945,43335696,43336626,43340265,43342994,43345854,43348907,43350941,43351751	43330859,43332000,43333434,43335170,43335826,43336686,43340352,43343075,43345980,43349045,43351041,43353898	Gene ID= ENSG00000168803.14 TPM= 1.17 Transcript Type= protein_coding
chr15	43358172	43371036	43358172	43371036	-	transcript1110.chr15.nic@ZSCAN29	transcript1110.chr15.nic	protein_coding	43370558,43369596,43368923,43366110,43363915,43358172	43371036,43370025,43369127,43366808,43364382,43361941	Gene ID= ENSG00000140265.12 TPM= 4.09 Transcript Type= NA
chr15	43358172	43368557	43358172	43368557	-	transcript1115.chr15.nic@ZSCAN29	transcript1115.chr15.nic	protein_coding	43366110,43363915,43358172	43368557,43364382,43361941	Gene ID= ENSG00000140265.12 TPM= 8.76 Transcript Type= NA
chr15	43371101	43405573	43371101	43405573	+	ENST00000260383.11@TUBGCP4	ENST00000260383.11	protein_coding	43371101,43376098,43376503,43377014,43377847,43380084,43383303,43385791,43386206,43395107,43395583,43397214,43398038,43400044,43401716,43403683,43404413,43405202	43371432,43376226,43376625,43377067,43377903,43380163,43383504,43385956,43386330,43395157,43395688,43397321,43398179,43400221,43401850,43403799,43404552,43405573	Gene ID= ENSG00000137822.12 TPM= 1.17 Transcript Type= protein_coding
chr15	43371115	43409771	43371115	43409771	+	ENST00000564079.5@TUBGCP4	ENST00000564079.5	protein_coding	43371115,43376098,43376503,43377014,43377847,43380084,43383303,43385791,43386206,43395107,43395583,43397214,43398041,43400044,43401716,43403683,43404413,43405202	43371432,43376226,43376625,43377067,43377903,43380163,43383504,43385956,43386330,43395157,43395688,43397321,43398179,43400221,43401850,43403799,43404552,43409771	Gene ID= ENSG00000137822.12 TPM= 3.5 Transcript Type= protein_coding
chr15	43407209	43510614	43407209	43510614	-	ENST00000263801.7@TP53BP1	ENST00000263801.7	protein_coding	43510370,43492284,43492002,43491669,43480895,43479859,43479397,43477593,43475565,43474673,43469858,43455892,43447366,43446387,43441526,43438324,43432194,43428016,43421855,43421025,43420305,43416225,43415594,43413119,43409647,43408897,43407943,43407209	43510614,43492468,43492095,43491753,43481022,43480017,43479526,43477759,43475694,43474767,43470066,43457218,43447485,43446590,43441583,43438416,43432677,43428168,43422126,43421174,43420735,43416416,43415809,43413334,43409741,43409096,43408088,43407570	Gene ID= ENSG00000067369.13 TPM= 9.34 Transcript Type= protein_coding
chr15	43407216	43493127	43407216	43493127	-	ENST00000450115.6@TP53BP1	ENST00000450115.6	protein_coding	43493037,43492284,43492002,43491669,43480895,43479859,43479397,43477593,43475565,43474673,43469858,43455892,43447366,43446387,43441526,43438324,43432194,43428016,43421855,43421025,43420305,43416225,43415594,43413119,43409647,43408897,43407943,43407216	43493127,43492468,43492095,43491753,43481022,43480017,43479526,43477759,43475694,43474767,43470066,43457218,43447485,43446590,43441583,43438416,43432677,43428168,43422126,43421174,43420735,43416416,43415809,43413328,43409741,43409096,43408088,43407570	Gene ID= ENSG00000067369.13 TPM= 4.67 Transcript Type= protein_coding
chr15	43415726	43418205	43415726	43418205	+	transcript1133.chr15.nnic@NA	transcript1133.chr15.nnic	NA	43415726,43416230	43415814,43418205	Gene ID= novel_gene_chr15_1134 TPM= 3.5 Transcript Type= NA
chr15	43527408	43531620	43527408	43531620	+	transcript1135.chr15.nic@MAP1A	transcript1135.chr15.nic	protein_coding	43527408,43529650,43530069	43529508,43529870,43531620	Gene ID= ENSG00000166963.12 TPM= 4.67 Transcript Type= NA
chr15	43640223	43690033	43640223	43690033	-	transcript1138.chr15.nnic@AC011330.1	transcript1138.chr15.nnic	unprocessed_pseudogene	43690004,43684634,43684193,43683239,43682697,43682399,43681930,43681688,43681062,43680837,43678590,43677635,43677441,43677187,43677018,43676673,43676392,43675936,43673787,43673374,43672922,43672599,43672334,43671289,43670977,43668751,43668028,43664418,43640223	43690033,43684727,43684367,43683434,43682787,43682484,43682084,43681789,43681223,43680958,43678691,43677721,43677516,43677296,43677100,43676804,43676513,43676118,43673928,43673597,43673049,43672713,43672441,43671405,43671141,43668900,43668118,43664543,43640496	Gene ID= ENSG00000249839.1 TPM= 2.34 Transcript Type= NA
chr15	43692886	43699222	43692886	43699222	+	ENST00000434505.5@CKMT1A	ENST00000434505.5	protein_coding	43692886,43693877,43694804,43695206,43695688,43696039,43696240,43698014,43698641,43698973	43693103,43694199,43695002,43695301,43695909,43696124,43696363,43698148,43698766,43699222	Gene ID= ENSG00000223572.9 TPM= 2.34 Transcript Type= protein_coding
chr15	43746392	43773279	43746392	43773279	+	ENST00000300289.9@PDIA3	ENST00000300289.9	protein_coding	43746392,43753824,43756649,43761424,43763077,43765450,43765887,43766728,43768489,43769518,43770250,43770523,43771105	43746706,43753902,43756766,43761531,43763206,43765566,43766012,43766910,43768597,43769646,43770329,43770580,43773279	Gene ID= ENSG00000167004.12 TPM= 29.19 Transcript Type= protein_coding
chr15	43792347	43794046	43792347	43794046	+	ENST00000339624.9@SERF2	ENST00000339624.9	protein_coding	43792347,43792975,43793687	43792383,43793083,43794046	Gene ID= ENSG00000140264.19 TPM= 439.02 Transcript Type= protein_coding
chr15	43792368	43794046	43792368	43794046	+	ENST00000403425.5@SERF2	ENST00000403425.5	protein_coding	43792368,43792975,43793710	43792611,43793083,43794046	Gene ID= ENSG00000140264.19 TPM= 29.19 Transcript Type= protein_coding
chr15	43804492	43824802	43804492	43824802	-	ENST00000267812.3@MFAP1	ENST00000267812.3	protein_coding	43824491,43817229,43814945,43814501,43813249,43812987,43809755,43805376,43804492	43824802,43817448,43815074,43814688,43813357,43813147,43809914,43805465,43805276	Gene ID= ENSG00000140259.6 TPM= 17.51 Transcript Type= protein_coding
chr15	43826963	43868419	43826963	43868419	+	ENST00000263795.10@WDR76	ENST00000263795.10	protein_coding	43826963,43827965,43835061,43836161,43839605,43842415,43842628,43843901,43851087,43856946,43858671,43861333,43866128	43827092,43828366,43835150,43836216,43839728,43842516,43842671,43844054,43851245,43857163,43858823,43861386,43868419	Gene ID= ENSG00000092470.11 TPM= 8.17 Transcript Type= protein_coding
chr15	43826980	43867018	43826980	43867018	+	ENST00000381246.6@WDR76	ENST00000381246.6	protein_coding	43826980,43827965,43835061,43836161,43839605,43842415,43842628,43843901,43851087,43856946,43858671,43861333,43866128	43827118,43828366,43835150,43836216,43839728,43842516,43842671,43844054,43851245,43857163,43858823,43861386,43867018	Gene ID= ENSG00000092470.11 TPM= 2.34 Transcript Type= protein_coding
chr15	44288731	44415758	44288731	44415758	+	ENST00000299957.10@CASC4	ENST00000299957.10	protein_coding	44288731,44322965,44328685,44331988,44337763,44338237,44379690,44380806,44402887,44413336	44289356,44323019,44328787,44332078,44337907,44338317,44379788,44380976,44403054,44415758	Gene ID= ENSG00000166734.18 TPM= 54.29 Transcript Type= protein_coding
chr15	44288760	44415757	44288760	44415757	+	ENST00000345795.6@CASC4	ENST00000345795.6	protein_coding	44288760,44322965,44328685,44331988,44337763,44338237,44379690,44380806,44413336	44289356,44323019,44328787,44332078,44337907,44338317,44379788,44380976,44415757	Gene ID= ENSG00000166734.18 TPM= 58.96 Transcript Type= protein_coding
chr15	44346936	44351472	44346936	44351472	+	transcript1189.chr15.nnic@NA	transcript1189.chr15.nnic	NA	44346936	44351472	Gene ID= novel_gene_chr15_1190 TPM= 2.34 Transcript Type= NA
chr15	44427234	44529038	44427234	44529038	+	ENST00000260327.8@CTDSPL2	ENST00000260327.8	protein_coding	44427234,44458991,44484224,44486551,44490784,44496380,44497027,44499727,44514598,44514765,44519169,44521311,44524109	44427772,44459200,44484362,44486700,44490999,44496458,44497138,44499813,44514660,44514844,44519295,44521406,44529038	Gene ID= ENSG00000137770.13 TPM= 5.84 Transcript Type= protein_coding
chr15	44533493	44536923	44533493	44536923	-	ENST00000313807.4@EIF3J-AS1	ENST00000313807.4	lincRNA	44536043,44533493	44536923,44535474	Gene ID= ENSG00000179523.4 TPM= 5.84 Transcript Type= lincRNA
chr15	44534504	44536896	44534504	44536896	-	transcript1229.chr15.nnic@NA	transcript1229.chr15.nnic	NA	44534504	44536896	Gene ID= novel_gene_chr15_1230 TPM= 2.34 Transcript Type= NA
chr15	44537057	44562803	44537057	44562803	+	ENST00000261868.9@EIF3J	ENST00000261868.9	protein_coding	44537057,44537324,44550876,44551431,44554553,44557489,44560249,44561018	44537237,44537427,44550930,44551522,44554667,44557650,44560322,44562803	Gene ID= ENSG00000104131.12 TPM= 36.2 Transcript Type= protein_coding
chr15	44711477	44718877	44711477	44718877	+	ENST00000558401.5@B2M	ENST00000558401.5	protein_coding	44711477,44715423,44716329,44717607	44711613,44715701,44716356,44718877	Gene ID= ENSG00000166710.17 TPM= 9.92 Transcript Type= protein_coding
chr15	44729001	44734000	44729001	44734000	+	ENST00000560141.2@TRIM69	ENST00000560141.2	protein_coding	44729001,44731363	44729552,44734000	Gene ID= ENSG00000185880.12 TPM= 7.01 Transcript Type= processed_transcript
chr15	45023104	45077185	45023104	45077185	+	ENST00000267814.13@SORD	ENST00000267814.13	protein_coding	45023104,45040408,45043257,45061067,45065271,45068181,45068877,45072317,45073365	45023349,45040441,45043421,45061226,45065389,45068246,45069052,45072438,45077185	Gene ID= ENSG00000140263.13 TPM= 1.17 Transcript Type= protein_coding
chr15	45117374	45130071	45117374	45130071	-	transcript1350.chr15.nic@DUOXA1	transcript1350.chr15.nic	protein_coding	45129852,45129460,45129018,45122868,45122185,45121087,45120592,45120103,45117374	45130071,45129615,45129134,45123043,45122242,45121221,45120805,45120320,45119365	Gene ID= ENSG00000140254.12 TPM= 17.07 Transcript Type= NA
chr15	45117374	45129879	45117374	45129879	-	transcript1402.chr15.nic@DUOXA1	transcript1402.chr15.nic	protein_coding	45129018,45122868,45122185,45121087,45120592,45120103,45117374	45129879,45123043,45122242,45121221,45120805,45120320,45119365	Gene ID= ENSG00000140254.12 TPM= 17.65 Transcript Type= NA
chr15	45117374	45129916	45117374	45129916	-	transcript1420.chr15.nic@DUOXA1	transcript1420.chr15.nic	protein_coding	45129018,45122868,45122185,45120592,45120103,45117374	45129916,45123043,45122242,45120805,45120320,45119365	Gene ID= ENSG00000140254.12 TPM= 11.09 Transcript Type= NA
chr15	45117374	45129877	45117374	45129877	-	ENST00000558996.5@DUOXA1	ENST00000558996.5	protein_coding	45129852,45122868,45122185,45120592,45120103,45117374	45129877,45123043,45122242,45120805,45120320,45119365	Gene ID= ENSG00000140254.12 TPM= 21.25 Transcript Type= protein_coding
chr15	45117371	45129859	45117371	45129859	-	ENST00000267803.8@DUOXA1	ENST00000267803.8	protein_coding	45129762,45129460,45129018,45122868,45122185,45121087,45120592,45120103,45119147,45117904,45117371	45129859,45129615,45129134,45123043,45122242,45121221,45120805,45120320,45119365,45118069,45117809	Gene ID= ENSG00000140254.12 TPM= 1.98 Transcript Type= protein_coding
chr15	45127219	45129877	45127219	45129877	-	transcript1447.chr15.nnic@NA	transcript1447.chr15.nnic	NA	45127219	45129877	Gene ID= novel_gene_chr15_1448 TPM= 5.84 Transcript Type= NA
chr15	45129933	45165576	45129933	45165576	+	ENST00000321429.8@DUOX1	ENST00000321429.8	protein_coding	45129933,45131471,45131918,45133864,45134145,45135104,45135474,45135782,45136350,45136529,45137924,45139066,45139427,45140895,45141292,45141975,45143190,45144036,45144895,45147433,45147904,45148272,45150632,45151123,45151874,45152286,45153380,45153951,45155802,45160837,45161738,45162219,45163532,45163790,45164779	45130098,45131662,45132024,45133947,45134309,45135291,45135675,45135948,45136410,45136625,45138014,45139168,45139599,45141070,45141410,45142112,45143303,45144235,45145080,45147658,45147997,45148447,45150701,45151248,45152052,45152516,45153479,45154000,45155929,45160990,45161970,45162377,45163687,45163918,45165576	Gene ID= ENSG00000137857.17 TPM= 129.14 Transcript Type= protein_coding
chr15	45129994	45165574	45129994	45165574	+	ENST00000389037.7@DUOX1	ENST00000389037.7	protein_coding	45129994,45131918,45133864,45134145,45135104,45135474,45135782,45136350,45136529,45137924,45139066,45139427,45140895,45141292,45141975,45143190,45144036,45144895,45147433,45147904,45148272,45150632,45151123,45151874,45152286,45153380,45153951,45155802,45160837,45161738,45162219,45163532,45163790,45164779	45130098,45132024,45133947,45134309,45135291,45135675,45135948,45136410,45136625,45138014,45139168,45139599,45141070,45141410,45142112,45143303,45144235,45145080,45147658,45147997,45148447,45150701,45151248,45152052,45152516,45153479,45154000,45155929,45160990,45161970,45162377,45163687,45163918,45165574	Gene ID= ENSG00000137857.17 TPM= 76.59 Transcript Type= protein_coding
chr15	45164467	45167367	45164467	45167367	-	transcript1445.chr15.nnic@NA	transcript1445.chr15.nnic	NA	45164467	45167367	Gene ID= novel_gene_chr15_1446 TPM= 16.35 Transcript Type= NA
chr15	45167333	45187981	45167333	45187981	-	transcript1454.chr15.nic@SHF	transcript1454.chr15.nic	protein_coding	45187454,45178165,45175219,45172147,45171883,45167333	45187981,45178306,45175425,45172318,45172002,45168133	Gene ID= ENSG00000138606.19 TPM= 3.5 Transcript Type= NA
chr15	45167214	45187956	45167214	45187956	-	ENST00000560540.5@SHF	ENST00000560540.5	protein_coding	45187454,45178165,45175219,45172149,45171883,45167214	45187956,45178306,45175425,45172318,45172002,45168133	Gene ID= ENSG00000138606.19 TPM= 2.34 Transcript Type= protein_coding
chr15	45361124	45378793	45361124	45378793	-	ENST00000396659.7@GATM	ENST00000396659.7	protein_coding	45378385,45376601,45369326,45368070,45366371,45366046,45364797,45363900,45361124	45378793,45376819,45369521,45368260,45366508,45366210,45364860,45364016,45362221	Gene ID= ENSG00000171766.15 TPM= 7.01 Transcript Type= protein_coding
chr15	45402332	45421419	45402332	45421419	+	transcript1461.chr15.nnic@SPATA5L1	transcript1461.chr15.nnic	protein_coding	45402332,45405320,45407062,45410372,45414571,45415587,45417269,45418557,45421043	45403518,45405505,45407223,45410530,45414780,45415809,45417399,45418682,45421419	Gene ID= ENSG00000171763.18 TPM= 2.34 Transcript Type= NA
chr15	45402331	45421419	45402331	45421419	+	ENST00000305560.10@SPATA5L1	ENST00000305560.10	protein_coding	45402331,45405320,45410372,45414571,45415587,45417269,45418557,45421043	45403518,45405505,45410530,45414780,45415779,45417399,45418682,45421419	Gene ID= ENSG00000171763.18 TPM= 24.52 Transcript Type= protein_coding
chr15	45402375	45421327	45402375	45421327	+	ENST00000531970.5@SPATA5L1	ENST00000531970.5	protein_coding	45402375,45405320,45410372,45414571,45415587,45417269,45418557,45421043	45403518,45405505,45410530,45414780,45415809,45417399,45418682,45421327	Gene ID= ENSG00000171763.18 TPM= 9.34 Transcript Type= nonsense_mediated_decay
chr15	45430529	45433342	45430529	45433342	+	ENST00000396650.6@C15orf48	ENST00000396650.6	protein_coding	45430529,45430770,45431001,45432072,45432948	45430655,45430832,45431086,45432132,45433342	Gene ID= ENSG00000166920.12 TPM= 25.69 Transcript Type= protein_coding
chr15	45430607	45433449	45430607	45433449	+	ENST00000344300.3@C15orf48	ENST00000344300.3	protein_coding	45430607,45431001,45432072,45432948	45430832,45431086,45432132,45433449	Gene ID= ENSG00000166920.12 TPM= 2.34 Transcript Type= protein_coding
chr15	45479611	45522807	45479611	45522807	-	ENST00000261867.4@SLC30A4	ENST00000261867.4	protein_coding	45522607,45521964,45511138,45490728,45488841,45487527,45486611,45479611	45522807,45522468,45511284,45490881,45489042,45487632,45486745,45485317	Gene ID= ENSG00000104154.6 TPM= 2.34 Transcript Type= protein_coding
chr15	45587123	45609711	45587123	45609711	+	ENST00000220531.7@BLOC1S6	ENST00000220531.7	protein_coding	45587123,45592135,45603100,45605428,45606395	45587525,45592276,45603187,45605514,45609711	Gene ID= ENSG00000104164.10 TPM= 37.36 Transcript Type= protein_coding
chr15	45587379	45607773	45587379	45607773	+	ENST00000567523.5@BLOC1S6	ENST00000567523.5	protein_coding	45587379,45592135,45603104,45605428,45606395	45587525,45592276,45603187,45605514,45607773	Gene ID= ENSG00000104164.10 TPM= 7.01 Transcript Type= nonsense_mediated_decay
chr15	45631148	45691280	45631148	45691280	+	ENST00000568606.5@SQOR	ENST00000568606.5	protein_coding	45631148,45631927,45658907,45661955,45669928,45673607,45676101,45682478,45688337,45689039,45690973	45631230,45632015,45659157,45662125,45669981,45673801,45676310,45682661,45688404,45689217,45691280	Gene ID= ENSG00000137767.13 TPM= 9.57 Transcript Type= protein_coding
chr15	45634740	45691294	45634740	45691294	+	ENST00000260324.11@SQOR	ENST00000260324.11	protein_coding	45634740,45658907,45661955,45669928,45673607,45676101,45682478,45688337,45689039,45690973	45635108,45659157,45662125,45669981,45673801,45676310,45682661,45688404,45689217,45691294	Gene ID= ENSG00000137767.13 TPM= 210.02 Transcript Type= protein_coding
chr15	45690084	45692493	45690084	45692493	-	transcript1508.chr15.nnic@NA	transcript1508.chr15.nnic	NA	45690084	45692493	Gene ID= novel_gene_chr15_1509 TPM= 3.74 Transcript Type= NA
chr15	47717543	47774221	47717543	47774221	+	transcript1513.chr15.nnic@SEMA6D	transcript1513.chr15.nnic	protein_coding	47717543,47759745,47760302,47760976,47761156,47761330,47761661,47762197,47763016,47763848,47764174,47764638,47764883,47765869,47766103,47766614,47767037,47770494	47717692,47759907,47760415,47761038,47761220,47761431,47761751,47762319,47763104,47764067,47764305,47764793,47765056,47766009,47766182,47766677,47767093,47774221	Gene ID= ENSG00000137872.16 TPM= 7.01 Transcript Type= NA
chr15	48134631	48178517	48134631	48178517	-	ENST00000324324.11@MYEF2	ENST00000324324.11	protein_coding	48178077,48168631,48167349,48166121,48165933,48159613,48158769,48158175,48157993,48153792,48152234,48151874,48151473,48151100,48149163,48149032,48134631	48178517,48168839,48167401,48166128,48166026,48159804,48158922,48158224,48158056,48153893,48152284,48151942,48151571,48151171,48149371,48149083,48143071	Gene ID= ENSG00000104177.17 TPM= 1.55 Transcript Type= protein_coding
chr15	48141797	48178359	48141797	48178359	-	transcript1519.chr15.nic@MYEF2	transcript1519.chr15.nic	protein_coding	48178077,48168631,48167349,48166121,48165933,48159613,48158769,48158175,48157993,48153792,48151874,48151473,48151100,48149163,48149032,48141797	48178359,48168839,48167401,48166128,48166026,48159804,48158922,48158224,48158056,48153893,48151942,48151571,48151171,48149371,48149083,48143071	Gene ID= ENSG00000104177.17 TPM= 2.72 Transcript Type= NA
chr15	48141797	48178353	48141797	48178353	-	ENST00000267836.10@MYEF2	ENST00000267836.10	protein_coding	48178077,48168631,48167349,48166121,48165933,48159613,48158769,48158175,48157993,48153792,48152234,48151874,48151473,48149163,48149032,48141797	48178353,48168839,48167401,48166128,48166026,48159804,48158922,48158224,48158056,48153893,48152284,48151942,48151571,48149371,48149083,48143071	Gene ID= ENSG00000104177.17 TPM= 1.55 Transcript Type= protein_coding
chr15	48331423	48343373	48331423	48343373	+	ENST00000331200.7@DUT	ENST00000331200.7	protein_coding	48331423,48332268,48334417,48336046,48341289,48341515,48342022	48331795,48332406,48334508,48336090,48341363,48341585,48343373	Gene ID= ENSG00000128951.13 TPM= 3.5 Transcript Type= protein_coding
chr15	48332103	48343369	48332103	48343369	+	ENST00000455976.6@DUT	ENST00000455976.6	protein_coding	48332103,48334417,48336046,48341289,48341515,48342022	48332406,48334508,48336090,48341363,48341585,48343369	Gene ID= ENSG00000128951.13 TPM= 1.17 Transcript Type= protein_coding
chr15	48408306	48645849	48408306	48645849	-	ENST00000316623.9@FBN1	ENST00000316623.9	protein_coding	48645575,48644606,48613010,48610728,48600139,48596283,48537611,48534080,48526130,48520659,48516183,48515387,48513549,48510044,48508582,48505025,48503787,48498985,48497266,48496100,48495469,48495123,48494204,48492461,48489851,48488368,48488113,48487312,48487075,48485374,48483818,48481655,48474528,48474255,48472551,48470634,48468412,48467938,48465790,48465568,48463899,48463082,48460246,48456637,48452562,48448768,48446706,48445376,48444541,48441721,48437768,48437322,48436961,48434594,48432866,48430671,48428346,48427567,48425739,48425369,48421952,48421558,48420687,48415536,48412569,48408306	48645849,48644950,48613092,48610826,48600234,48596378,48537808,48534205,48526255,48520817,48516362,48515527,48513668,48510169,48508704,48505147,48503939,48499038,48497391,48496225,48495588,48495260,48494254,48492586,48490078,48488493,48488241,48487437,48487200,48485496,48483943,48481780,48474650,48474377,48472676,48470756,48468534,48468102,48465858,48465693,48464021,48463240,48460317,48456762,48452684,48448893,48446822,48445504,48444660,48441846,48437917,48437387,48437077,48434713,48432988,48430802,48428471,48427773,48425864,48425491,48422068,48421686,48420806,48415767,48412743,48411379	Gene ID= ENSG00000166147.13 TPM= 10.51 Transcript Type= protein_coding
chr15	48640989	48645721	48640989	48645721	-	ENST00000560355.1@FBN1	ENST00000560355.1	protein_coding	48645575,48640989	48645721,48644950	Gene ID= ENSG00000166147.13 TPM= 1.17 Transcript Type= protein_coding
chr15	48877886	48880183	48877886	48880183	+	ENST00000530028.2@EID1	ENST00000530028.2	protein_coding	48877886	48880183	Gene ID= ENSG00000255302.4 TPM= 4.67 Transcript Type= protein_coding
chr15	48988638	49046563	48988638	49046563	-	ENST00000559471.5@SECISBP2L	ENST00000559471.5	protein_coding	49046276,49037591,49035334,49032965,49028453,49028144,49027365,49019418,49017548,49016848,49016560,49012648,49011731,49009216,49000877,48999833,48996367,48988638	49046563,49037769,49035658,49033100,49028682,49028168,49027480,49019552,49017628,49017015,49016701,49012817,49011863,49009378,49001097,48999987,48996586,48992926	Gene ID= ENSG00000138593.8 TPM= 12.84 Transcript Type= protein_coding
chr15	48988770	49046433	48988770	49046433	-	ENST00000261847.7@SECISBP2L	ENST00000261847.7	protein_coding	49046276,49037591,49035334,49032965,49028453,49028144,49027365,49017548,49016848,49016560,49012648,49011731,49009216,49000877,48999833,48996367,48988770	49046433,49037769,49035658,49033100,49028682,49028168,49027480,49017628,49017015,49016701,49012817,49011863,49009378,49001097,48999987,48996586,48992926	Gene ID= ENSG00000138593.8 TPM= 2.34 Transcript Type= protein_coding
chr15	49122728	49155652	49122728	49155652	-	ENST00000388901.9@COPS2	ENST00000388901.9	protein_coding	49155525,49144965,49144227,49139528,49137348,49137150,49134340,49133930,49133759,49130719,49129477,49128702,49122728	49155652,49145078,49144304,49139653,49137437,49137227,49134514,49134108,49133811,49130816,49129559,49128760,49128094	Gene ID= ENSG00000166200.14 TPM= 5.84 Transcript Type= protein_coding
chr15	49127350	49155661	49127350	49155661	-	ENST00000299259.10@COPS2	ENST00000299259.10	protein_coding	49155525,49144965,49144227,49139528,49137348,49137150,49134340,49133930,49133759,49130719,49129477,49128702,49127350	49155661,49145078,49144304,49139653,49137458,49137227,49134514,49134108,49133811,49130816,49129559,49128760,49128094	Gene ID= ENSG00000166200.14 TPM= 18.68 Transcript Type= protein_coding
chr15	49155770	49330758	49155770	49330758	+	transcript1591.chr15.nic@GALK2	transcript1591.chr15.nic	protein_coding	49155770,49161740,49201162,49217190,49235851,49239221,49281987,49283566,49292327,49319604,49327952	49156016,49161861,49201250,49217313,49235941,49239367,49282085,49283718,49292537,49319805,49330758	Gene ID= ENSG00000156958.14 TPM= 2.34 Transcript Type= NA
chr15	49155765	49331882	49155765	49331882	+	ENST00000327171.7@GALK2	ENST00000327171.7	protein_coding	49155765,49201162,49217190,49235851,49239221,49281987,49283566,49292327,49319604,49327952	49156016,49201250,49217313,49235941,49239367,49282085,49283718,49292537,49319805,49331882	Gene ID= ENSG00000156958.14 TPM= 1.17 Transcript Type= protein_coding
chr15	49170016	49328518	49170016	49328518	+	ENST00000560031.5@GALK2	ENST00000560031.5	protein_coding	49170016,49201162,49217190,49235851,49239221,49281987,49283566,49292327,49319604,49327952	49170375,49201250,49217313,49235941,49239367,49282085,49283718,49292537,49319805,49328518	Gene ID= ENSG00000156958.14 TPM= 12.26 Transcript Type= protein_coding
chr15	49423096	49488775	49423096	49488775	+	ENST00000267843.8@FGF7	ENST00000267843.8	protein_coding	49423096,49424032,49483151,49484310	49423440,49424583,49483254,49488775	Gene ID= ENSG00000140285.9 TPM= 11.68 Transcript Type= protein_coding
chr15	49466339	49485492	49466339	49485492	+	transcript1611.chr15.nnic@FGF7	transcript1611.chr15.nnic	protein_coding	49466339,49483151,49484310	49466764,49483254,49485492	Gene ID= ENSG00000140285.9 TPM= 2.34 Transcript Type= NA
chr15	49621012	49645118	49621012	49645118	+	transcript1621.chr15.nic@DTWD1	transcript1621.chr15.nic	protein_coding	49621012,49625113,49631001,49632159,49634536,49643331	49621122,49625431,49631058,49632302,49634794,49645118	Gene ID= ENSG00000104047.14 TPM= 2.34 Transcript Type= NA
chr15	49620980	49644049	49620980	49644049	+	ENST00000403028.7@DTWD1	ENST00000403028.7	protein_coding	49620980,49625113,49632159,49634536,49643331	49621122,49625431,49632302,49634794,49644049	Gene ID= ENSG00000104047.14 TPM= 16.35 Transcript Type= protein_coding
chr15	49621068	49656232	49621068	49656232	+	transcript1629.chr15.nnic@DTWD1	transcript1629.chr15.nnic	protein_coding	49621068,49625113,49632159,49634536,49653878	49621122,49625431,49632302,49634794,49656232	Gene ID= ENSG00000104047.14 TPM= 2.34 Transcript Type= NA
chr15	49621063	49636891	49621063	49636891	+	transcript1635.chr15.nic@DTWD1	transcript1635.chr15.nic	protein_coding	49621063,49625113,49632159,49634536	49621122,49625431,49632302,49636891	Gene ID= ENSG00000104047.14 TPM= 2.34 Transcript Type= NA
chr15	50182196	50236395	50182196	50236395	+	ENST00000267842.9@SLC27A2	ENST00000267842.9	protein_coding	50182196,50197500,50202487,50205239,50222965,50225988,50226980,50228945,50233868,50235920	50182905,50197709,50202645,50205363,50223159,50226078,50227178,50229042,50233998,50236395	Gene ID= ENSG00000140284.10 TPM= 2.34 Transcript Type= protein_coding
chr15	50241947	50265726	50241947	50265726	-	transcript1642.chr15.nic@HDC	transcript1642.chr15.nic	protein_coding	50265593,50263235,50258404,50257425,50254530,50254130,50252612,50252430,50248245,50243143,50241947	50265726,50263407,50258517,50257547,50254664,50254273,50253666,50252520,50248343,50243244,50243006	Gene ID= ENSG00000140287.10 TPM= 7.01 Transcript Type= NA
chr15	50241947	50266026	50241947	50266026	-	ENST00000267845.7@HDC	ENST00000267845.7	protein_coding	50265593,50263235,50258404,50257425,50254530,50254130,50253600,50252612,50252430,50248245,50243143,50241947	50266026,50263407,50258517,50257547,50254664,50254273,50253666,50252774,50252520,50248343,50243244,50243006	Gene ID= ENSG00000140287.10 TPM= 1.17 Transcript Type= protein_coding
chr15	50277263	50355179	50277263	50355179	-	transcript1645.chr15.nic@GABPB1	transcript1645.chr15.nic	protein_coding	50354985,50346372,50309691,50303966,50302929,50301221,50300789,50289483,50286068,50277263	50355179,50346395,50309798,50304133,50303123,50301368,50300902,50289668,50286183,50278784	Gene ID= ENSG00000104064.16 TPM= 2.34 Transcript Type= NA
chr15	50277263	50355198	50277263	50355198	-	transcript1646.chr15.nic@GABPB1	transcript1646.chr15.nic	protein_coding	50354985,50346372,50309691,50303966,50302929,50301257,50300789,50289483,50286068,50277263	50355198,50346395,50309798,50304133,50303123,50301368,50300902,50289668,50286183,50278784	Gene ID= ENSG00000104064.16 TPM= 7.01 Transcript Type= NA
chr15	50275392	50355408	50275392	50355408	-	ENST00000380877.7@GABPB1	ENST00000380877.7	protein_coding	50354985,50309691,50303966,50302929,50301257,50300789,50289483,50286068,50275392	50355408,50309798,50304133,50303123,50301368,50300902,50289668,50286183,50278784	Gene ID= ENSG00000104064.16 TPM= 14.01 Transcript Type= protein_coding
chr15	50277263	50355153	50277263	50355153	-	ENST00000220429.12@GABPB1	ENST00000220429.12	protein_coding	50354985,50309691,50303966,50302929,50301221,50300789,50289483,50286068,50277263	50355153,50309798,50304133,50303123,50301368,50300902,50289668,50286183,50278784	Gene ID= ENSG00000104064.16 TPM= 5.84 Transcript Type= protein_coding
chr15	50285880	50355198	50285880	50355198	-	ENST00000396464.7@GABPB1	ENST00000396464.7	protein_coding	50354985,50309691,50303966,50302929,50301257,50300789,50289483,50285880	50355198,50309798,50304133,50303123,50301368,50300902,50289668,50286183	Gene ID= ENSG00000104064.16 TPM= 1.17 Transcript Type= protein_coding
chr15	50285880	50355153	50285880	50355153	-	ENST00000429662.6@GABPB1	ENST00000429662.6	protein_coding	50354985,50309691,50303966,50302929,50301221,50300789,50289483,50285880	50355153,50309798,50304133,50303123,50301368,50300902,50289668,50286183	Gene ID= ENSG00000104064.16 TPM= 1.17 Transcript Type= protein_coding
chr15	50349769	50354881	50349769	50354881	-	transcript1666.chr15.nnic@NA	transcript1666.chr15.nnic	NA	50349769	50354881	Gene ID= novel_gene_chr15_1667 TPM= 3.5 Transcript Type= NA
chr15	50353761	50354933	50353761	50354933	-	transcript1662.chr15.nnic@NA	transcript1662.chr15.nnic	NA	50353761	50354933	Gene ID= novel_gene_chr15_1663 TPM= 24.52 Transcript Type= NA
chr15	50354943	50356329	50354943	50356329	+	transcript1660.chr15.nnic@NA	transcript1660.chr15.nnic	NA	50354943	50356329	Gene ID= novel_gene_chr15_1661 TPM= 5.84 Transcript Type= NA
chr15	50355467	50372202	50355467	50372202	+	ENST00000499624.3@GABPB1-AS1	ENST00000499624.3	antisense_RNA	50355467,50356100	50355545,50372202	Gene ID= ENSG00000244879.6 TPM= 1.17 Transcript Type= antisense_RNA
chr15	50424385	50499776	50424385	50499776	+	transcript1668.chr15.nic@USP8	transcript1668.chr15.nic	protein_coding	50424385,50432338,50439009,50441349,50449400,50459000,50462280,50465047,50471633,50476849,50477276,50481481,50484275,50489801,50490263,50492701,50494070,50495848,50497089,50498596,50498903	50424514,50432499,50439177,50441493,50449485,50459162,50462322,50465191,50471795,50476993,50477499,50482065,50484361,50489881,50490525,50492913,50494280,50496084,50497231,50498728,50499776	Gene ID= ENSG00000138592.13 TPM= 5.25 Transcript Type= NA
chr15	50424382	50499776	50424382	50499776	+	ENST00000307179.8@USP8	ENST00000307179.8	protein_coding	50424382,50439009,50441349,50449400,50459000,50462280,50465047,50471633,50476849,50477276,50481481,50484275,50489801,50490263,50492701,50494070,50495848,50497089,50498596,50498903	50424514,50439177,50441493,50449485,50459162,50462322,50465191,50471795,50476993,50477499,50482065,50484361,50489881,50490525,50492913,50494280,50496084,50497231,50498728,50499776	Gene ID= ENSG00000138592.13 TPM= 18.1 Transcript Type= protein_coding
chr15	50424382	50514419	50424382	50514419	+	ENST00000396444.7@USP8	ENST00000396444.7	protein_coding	50424382,50439009,50441349,50449400,50459000,50462280,50465047,50471633,50476849,50477276,50481481,50484275,50489801,50490263,50492701,50494070,50495848,50497089,50498596,50498903	50424654,50439177,50441493,50449485,50459162,50462322,50465191,50471795,50476993,50477499,50482065,50484361,50489881,50490525,50492913,50494280,50496084,50497231,50498728,50514419	Gene ID= ENSG00000138592.13 TPM= 3.5 Transcript Type= protein_coding
chr15	50424399	50499776	50424399	50499776	+	transcript1680.chr15.nic@USP8	transcript1680.chr15.nic	protein_coding	50424399,50439009,50441349,50449400,50459000,50462280,50465047,50471633,50476849,50477276,50481481,50489801,50490263,50492701,50494070,50495848,50497089,50498596,50498903	50424514,50439177,50441493,50449485,50459162,50462322,50465191,50471795,50476993,50477499,50482065,50489881,50490525,50492913,50494280,50496084,50497231,50498728,50499776	Gene ID= ENSG00000138592.13 TPM= 12.26 Transcript Type= NA
chr15	50424401	50499776	50424401	50499776	+	transcript1681.chr15.nic@USP8	transcript1681.chr15.nic	protein_coding	50424401,50439009,50441349,50449400,50459000,50462280,50465047,50471633,50476849,50477276,50481481,50489801,50490263,50492701,50494070,50495848,50497089,50498596,50498903	50424654,50439177,50441493,50449485,50459162,50462322,50465191,50471795,50476993,50477499,50482065,50489881,50490525,50492913,50494280,50496084,50497231,50498728,50499776	Gene ID= ENSG00000138592.13 TPM= 5.25 Transcript Type= NA
chr15	50424380	50449440	50424380	50449440	+	ENST00000560297.5@USP8	ENST00000560297.5	protein_coding	50424380,50432338,50439009,50441349,50449400	50424514,50432499,50439177,50441493,50449440	Gene ID= ENSG00000138592.13 TPM= 1.17 Transcript Type= protein_coding
chr15	50429306	50430132	50429306	50430132	-	transcript1693.chr15.nnic@NA	transcript1693.chr15.nnic	NA	50429306	50430132	Gene ID= novel_gene_chr15_1694 TPM= 3.5 Transcript Type= NA
chr15	50557158	50686815	50557158	50686815	-	ENST00000313478.11@TRPM7	ENST00000313478.11	protein_coding	50686531,50662967,50657781,50648687,50643340,50639424,50637422,50634382,50632869,50631417,50628149,50624166,50619745,50614123,50613707,50612549,50611093,50609806,50609581,50607200,50604866,50599122,50596255,50594429,50593617,50591911,50589592,50586392,50583089,50580874,50578639,50575869,50575724,50574852,50574637,50574274,50570104,50569887,50557158	50686815,50663046,50657819,50648885,50643553,50639548,50637593,50634556,50632992,50631489,50628249,50624300,50619798,50614263,50613841,50612829,50611321,50609961,50609724,50607328,50605144,50599296,50596381,50594613,50593749,50592626,50589656,50586488,50583159,50580908,50578664,50575919,50575789,50575135,50574719,50574479,50570155,50569993,50561808	Gene ID= ENSG00000092439.13 TPM= 1.17 Transcript Type= protein_coding
chr15	50704531	50765721	50704531	50765721	-	transcript1703.chr15.nnic@SPPL2A	transcript1703.chr15.nnic	protein_coding	50765468,50749636,50748688,50748113,50747495,50739680,50736644,50736101,50732603,50730965,50726321,50725221,50722124,50719940,50707524,50704531	50765721,50749746,50748870,50748202,50747628,50739828,50736740,50736202,50732684,50731039,50726377,50725323,50722201,50720100,50707874,50706124	Gene ID= ENSG00000138600.9 TPM= 4.67 Transcript Type= NA
chr15	50707577	50765721	50707577	50765721	-	transcript1705.chr15.nic@SPPL2A	transcript1705.chr15.nic	protein_coding	50765468,50749636,50748688,50748113,50747495,50739680,50736644,50736101,50732603,50730965,50726321,50726073,50725221,50722124,50719940,50707577	50765721,50749746,50748870,50748202,50747628,50739828,50736740,50736202,50732684,50731039,50726377,50726126,50725323,50722201,50720100,50707874	Gene ID= ENSG00000138600.9 TPM= 17.51 Transcript Type= NA
chr15	50702266	50765808	50702266	50765808	-	ENST00000261854.9@SPPL2A	ENST00000261854.9	protein_coding	50765468,50749636,50748688,50748113,50747495,50739680,50736644,50736101,50732603,50730965,50726321,50725221,50722124,50719940,50702266	50765808,50749746,50748870,50748202,50747628,50739828,50736740,50736202,50732684,50731039,50726377,50725323,50722201,50720100,50707874	Gene ID= ENSG00000138600.9 TPM= 18.68 Transcript Type= protein_coding
chr15	50707577	50765721	50707577	50765721	-	transcript1707.chr15.nic@SPPL2A	transcript1707.chr15.nic	protein_coding	50765468,50749636,50748688,50748113,50747495,50739680,50736644,50736101,50732603,50730965,50726073,50725221,50722124,50719940,50707577	50765721,50749746,50748870,50748202,50747628,50739828,50736740,50736202,50732684,50731039,50726377,50725323,50722201,50720100,50707874	Gene ID= ENSG00000138600.9 TPM= 10.51 Transcript Type= NA
chr15	50763983	50765500	50763983	50765500	-	transcript1715.chr15.nnic@NA	transcript1715.chr15.nnic	NA	50763983	50765500	Gene ID= novel_gene_chr15_1716 TPM= 2.34 Transcript Type= NA
chr15	51056604	51094705	51056604	51094705	-	ENST00000637513.1@TNFAIP8L3	ENST00000637513.1	protein_coding	51094544,51056604	51094705,51058443	Gene ID= ENSG00000183578.6 TPM= 11.68 Transcript Type= protein_coding
chr15	51447776	51481479	51447776	51481479	-	ENST00000560891.5@DMXL2	ENST00000560891.5	protein_coding	51480542,51479948,51478271,51476589,51474344,51471223,51466184,51465566,51464675,51463379,51459598,51458709,51458506,51457328,51456309,51456066,51455151,51453550,51451645,51450129,51447776	51481479,51480139,51478347,51476719,51474592,51471401,51466311,51465651,51464876,51463496,51459660,51458795,51458627,51457466,51456369,51456193,51455228,51453641,51451697,51450346,51449193	Gene ID= ENSG00000104093.13 TPM= 1.17 Transcript Type= protein_coding
chr15	51447788	51460512	51447788	51460512	-	transcript1721.chr15.nic@DMXL2	transcript1721.chr15.nic	protein_coding	51459598,51458709,51458506,51457328,51456309,51456066,51455151,51453550,51451645,51450129,51447788	51460512,51458795,51458627,51457466,51456369,51456193,51455228,51453641,51451697,51450346,51449193	Gene ID= ENSG00000104093.13 TPM= 2.34 Transcript Type= NA
chr15	51723011	51738137	51723011	51738137	-	ENST00000267838.6@LYSMD2	ENST00000267838.6	protein_coding	51737350,51724790,51723011	51738137,51725121,51723649	Gene ID= ENSG00000140280.13 TPM= 6.42 Transcript Type= protein_coding
chr15	51723069	51737638	51723069	51737638	-	transcript1727.chr15.nnic@LYSMD2	transcript1727.chr15.nnic	protein_coding	51737350,51724790,51723069	51737638,51724991,51723649	Gene ID= ENSG00000140280.13 TPM= 2.92 Transcript Type= NA
chr15	51751561	51816368	51751561	51816368	+	ENST00000249700.8@TMOD2	ENST00000249700.8	protein_coding	51751561,51766373,51768262,51773712,51776932,51781044,51782721,51798197,51806377,51808420	51751712,51766567,51768418,51773834,51777018,51781174,51782828,51798340,51806521,51816368	Gene ID= ENSG00000128872.9 TPM= 25.69 Transcript Type= protein_coding
chr15	51829682	51864283	51829682	51864283	+	transcript1750.chr15.nic@TMOD3	transcript1750.chr15.nic	protein_coding	51829682,51862811	51829836,51864283	Gene ID= ENSG00000138594.13 TPM= 3.5 Transcript Type= NA
chr15	51829630	51915725	51829630	51915725	+	ENST00000308580.11@TMOD3	ENST00000308580.11	protein_coding	51829630,51862811,51869217,51887589,51889056,51893815,51896419,51900155,51901892,51908776	51829836,51863010,51869373,51887711,51889145,51893945,51896526,51900298,51902036,51915725	Gene ID= ENSG00000138594.13 TPM= 21.02 Transcript Type= protein_coding
chr15	51938025	51971806	51938025	51971806	-	ENST00000299601.9@LEO1	ENST00000299601.9	protein_coding	51971688,51965749,51962389,51960639,51959899,51958742,51954481,51953129,51951844,51949808,51947292,51938025	51971806,51966504,51962493,51960733,51960044,51958826,51954575,51953263,51951979,51949994,51947389,51938260	Gene ID= ENSG00000166477.12 TPM= 33.86 Transcript Type= protein_coding
chr15	51938027	51971776	51938027	51971776	-	ENST00000315141.5@LEO1	ENST00000315141.5	protein_coding	51971688,51965749,51962389,51960639,51959899,51953129,51951844,51949808,51947292,51938027	51971776,51966504,51962493,51960733,51960044,51953263,51951979,51949994,51947389,51938260	Gene ID= ENSG00000166477.12 TPM= 1.17 Transcript Type= protein_coding
chr15	52019238	52066142	52019238	52066142	+	transcript1761.chr15.nic@MAPK6	transcript1761.chr15.nic	protein_coding	52019238,52042754,52045830,52049993,52058633,52061299,52063902	52019376,52042833,52047015,52050137,52058797,52061500,52066142	Gene ID= ENSG00000069956.11 TPM= 2.34 Transcript Type= NA
chr15	52019201	52067372	52019201	52067372	+	ENST00000261845.6@MAPK6	ENST00000261845.6	protein_coding	52019201,52045830,52049993,52058633,52061299,52063902	52019376,52047015,52050137,52058797,52061500,52067372	Gene ID= ENSG00000069956.11 TPM= 4.67 Transcript Type= protein_coding
chr15	52120925	52179991	52120925	52179991	-	transcript1770.chr15.nnic@GNB5	transcript1770.chr15.nnic	protein_coding	52179768,52153940,52149884,52147459,52141140,52135613,52133378,52128196,52125948,52124473,52121768,52120925	52179991,52154076,52149925,52147535,52141272,52135756,52133469,52128244,52126044,52124639,52122768,52121625	Gene ID= ENSG00000069966.18 TPM= 3.5 Transcript Type= NA
chr15	52120931	52179991	52120931	52179991	-	transcript1771.chr15.nnic@GNB5	transcript1771.chr15.nnic	protein_coding	52179768,52153940,52149884,52147459,52141140,52135613,52133378,52128196,52125948,52124473,52122267,52120931	52179991,52154076,52149925,52147535,52141272,52135756,52133469,52128244,52126044,52124639,52122768,52122180	Gene ID= ENSG00000069966.18 TPM= 2.34 Transcript Type= NA
chr15	52120937	52179991	52120937	52179991	-	transcript1772.chr15.nnic@GNB5	transcript1772.chr15.nnic	protein_coding	52179768,52153940,52149884,52147459,52141140,52135613,52133378,52128196,52125948,52124473,52122705,52120937	52179991,52154076,52149925,52147535,52141272,52135756,52133469,52128244,52126044,52124639,52122768,52122180	Gene ID= ENSG00000069966.18 TPM= 2.34 Transcript Type= NA
chr15	52120939	52179691	52120939	52179691	-	transcript1773.chr15.nnic@GNB5	transcript1773.chr15.nnic	protein_coding	52179615,52153940,52149884,52147459,52141140,52135613,52133378,52128196,52125948,52124473,52120939	52179691,52154076,52149925,52147535,52141272,52135756,52133469,52128244,52126044,52124639,52122768	Gene ID= ENSG00000069966.18 TPM= 2.34 Transcript Type= NA
chr15	52122206	52180001	52122206	52180001	-	ENST00000358784.11@GNB5	ENST00000358784.11	protein_coding	52179768,52153940,52149884,52147459,52141140,52135613,52133378,52128196,52125948,52124473,52122206	52180001,52154076,52149925,52147535,52141272,52135756,52133469,52128244,52126044,52124639,52122768	Gene ID= ENSG00000069966.18 TPM= 7.01 Transcript Type= protein_coding
chr15	52193374	52252788	52193374	52252788	-	transcript1781.chr15.nnic@MYO5C	transcript1781.chr15.nnic	protein_coding	52252702,52246917,52245963,52245354,52244356,52237482,52235670,52232622,52229133,52225439,52225075,52224901,52223544,52221162,52219759,52218519,52214603,52213178,52211730,52208554,52205816,52204865,52196309,52195377,52193374	52252788,52248262,52246042,52245472,52244567,52237646,52235763,52232687,52229313,52225532,52225138,52224981,52223724,52221255,52219822,52218687,52214690,52213286,52211882,52208643,52205966,52205147,52196483,52195457,52194054	Gene ID= ENSG00000128833.12 TPM= 2.34 Transcript Type= NA
chr15	52250226	52295804	52250226	52295804	-	transcript1786.chr15.nic@MYO5C	transcript1786.chr15.nic	protein_coding	52295610,52282782,52279509,52278873,52275562,52272580,52271763,52269753,52264190,52260862,52256639,52253317,52250226	52295804,52282892,52279674,52279017,52275718,52272723,52271844,52269860,52264296,52261127,52256720,52253457,52251515	Gene ID= ENSG00000128833.12 TPM= 4.67 Transcript Type= NA
chr15	52250226	52295804	52250226	52295804	-	transcript1790.chr15.nic@MYO5C	transcript1790.chr15.nic	protein_coding	52295610,52282782,52279509,52278873,52275562,52272580,52269753,52264190,52260902,52256639,52253317,52250226	52295804,52282892,52279674,52279017,52275718,52272723,52269860,52264296,52261127,52256720,52253457,52251515	Gene ID= ENSG00000128833.12 TPM= 2.34 Transcript Type= NA
chr15	52250226	52295804	52250226	52295804	-	transcript1791.chr15.nnic@MYO5C	transcript1791.chr15.nnic	protein_coding	52295610,52282782,52279509,52278873,52275562,52272580,52271763,52269753,52264190,52256639,52253317,52250226	52295804,52282892,52279674,52279017,52275718,52272723,52271844,52269860,52264296,52256720,52253457,52251515	Gene ID= ENSG00000128833.12 TPM= 4.67 Transcript Type= NA
chr15	52192322	52295798	52192322	52295798	-	ENST00000261839.11@MYO5C	ENST00000261839.11	protein_coding	52295610,52282782,52279509,52278873,52275562,52272580,52271763,52269753,52264190,52260862,52256639,52253317,52251390,52248700,52247458,52246917,52245956,52245354,52244356,52242048,52239733,52237482,52235670,52232622,52229133,52225439,52225075,52224901,52223544,52221162,52219759,52218519,52214603,52213188,52211730,52208554,52205816,52204865,52196309,52195377,52192322	52295798,52282892,52279674,52279017,52275718,52272723,52271844,52269860,52264296,52261127,52256720,52253457,52251515,52248783,52247592,52247014,52246042,52245465,52244567,52242213,52239879,52237646,52235763,52232685,52229313,52225532,52225138,52224981,52223724,52221255,52219822,52218687,52214690,52213286,52211884,52208643,52205966,52205147,52196483,52195457,52194054	Gene ID= ENSG00000128833.12 TPM= 22.18 Transcript Type= protein_coding
chr15	52547045	52569239	52547045	52569239	-	ENST00000566423.5@ARPP19	ENST00000566423.5	protein_coding	52569116,52568848,52557100,52547045	52569239,52568902,52557222,52552104	Gene ID= ENSG00000128989.10 TPM= 12.84 Transcript Type= protein_coding
chr15	52547244	52569164	52547244	52569164	-	ENST00000249822.8@ARPP19	ENST00000249822.8	protein_coding	52568848,52557100,52547244	52569164,52557222,52552104	Gene ID= ENSG00000128989.10 TPM= 51.37 Transcript Type= protein_coding
chr15	52581321	52679384	52581321	52679384	-	transcript1817.chr15.nic@FAM214A	transcript1817.chr15.nic	protein_coding	52678430,52678006,52613673,52611575,52611130,52608568,52605133,52601086,52600127,52593578,52587151,52584745,52581321	52679384,52678122,52613857,52611777,52611255,52610383,52605246,52601165,52600235,52593736,52587219,52584944,52582307	Gene ID= ENSG00000047346.12 TPM= 4.67 Transcript Type= NA
chr15	53515163	53759662	53515163	53759662	-	ENST00000360509.9@WDR72	ENST00000360509.9	protein_coding	53759633,53732997,53722802,53716607,53715193,53714434,53712772,53711336,53710857,53705927,53704988,53702134,53699750,53665572,53615426,53613666,53609513,53597079,53523218,53515163	53759662,53733161,53722908,53716685,53715367,53714510,53712891,53711481,53710953,53706074,53705233,53702354,53699945,53665768,53616243,53613757,53609592,53597274,53523322,53517754	Gene ID= ENSG00000166415.14 TPM= 2.34 Transcript Type= protein_coding
chr15	53910769	53914712	53910769	53914712	+	ENST00000624468.1@AC084759.3	ENST00000624468.1	TEC	53910769	53914712	Gene ID= ENSG00000280362.1 TPM= 2.34 Transcript Type= TEC
chr15	55180806	55197067	55180806	55197067	-	ENST00000260443.8@RSL24D1	ENST00000260443.8	protein_coding	55196810,55192720,55190975,55185362,55183315,55180806	55197067,55192833,55191047,55185425,55183400,55182225	Gene ID= ENSG00000137876.9 TPM= 8.17 Transcript Type= protein_coding
chr15	55202969	55289815	55202969	55289815	-	ENST00000336787.5@RAB27A	ENST00000336787.5	protein_coding	55289716,55270165,55234782,55230401,55228609,55223889,55202969	55289815,55270284,55234956,55230486,55228712,55224012,55205705	Gene ID= ENSG00000069974.15 TPM= 15.18 Transcript Type= protein_coding
chr15	55318960	55355648	55318960	55355648	+	ENST00000164305.9@PIGB	ENST00000164305.9	protein_coding	55318960,55320275,55321273,55327531,55329724,55333867,55339267,55340612,55341738,55350699,55354798,55355286	55319413,55320410,55321390,55327635,55329854,55334007,55339318,55340823,55341802,55350912,55354978,55355648	Gene ID= ENSG00000069943.9 TPM= 14.01 Transcript Type= protein_coding
chr15	55355218	55408371	55355218	55408371	-	transcript1848.chr15.nnic@CCPG1	transcript1848.chr15.nnic	protein_coding	55408221,55389365,55385600,55378300,55376949,55371793,55365188,55359539,55356312,55355218	55408371,55389433,55385714,55378376,55377150,55372044,55365309,55360944,55356409,55355760	Gene ID= ENSG00000260916.7 TPM= 7.01 Transcript Type= NA
chr15	55358839	55408318	55358839	55408318	-	transcript1858.chr15.nic@CCPG1	transcript1858.chr15.nic	protein_coding	55408221,55399785,55389365,55385600,55378300,55376949,55371793,55365188,55358839	55408318,55399926,55389433,55385714,55378376,55377150,55372044,55365309,55360944	Gene ID= ENSG00000260916.7 TPM= 9.34 Transcript Type= NA
chr15	55355250	55408510	55355250	55408510	-	ENST00000310958.10@CCPG1	ENST00000310958.10	protein_coding	55408221,55389365,55385600,55378300,55376949,55371793,55365188,55355250	55408510,55389433,55385714,55378376,55377150,55372044,55365309,55360944	Gene ID= ENSG00000260916.7 TPM= 94.58 Transcript Type= protein_coding
chr15	55355239	55408259	55355239	55408259	-	ENST00000442196.7@CCPG1	ENST00000442196.7	protein_coding	55408221,55389365,55385600,55378300,55376949,55371793,55365188,55359539,55355239	55408259,55389433,55385714,55378376,55377150,55372044,55365309,55360944,55356409	Gene ID= ENSG00000260916.7 TPM= 10.51 Transcript Type= protein_coding
chr15	55358839	55408279	55358839	55408279	-	ENST00000568808.5@CCPG1	ENST00000568808.5	protein_coding	55408221,55389365,55385600,55378300,55376949,55371793,55358839	55408279,55389433,55385714,55378376,55377150,55372030,55360944	Gene ID= ENSG00000260916.7 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr15	55430308	55498377	55430308	55498377	-	ENST00000457155.6@DNAAF4	ENST00000457155.6	protein_coding	55498207,55497712,55491123,55466930,55450222,55439472,55434905,55430308	55498377,55497859,55491256,55467161,55450367,55439581,55435058,55430779	Gene ID= ENSG00000256061.7 TPM= 1.17 Transcript Type= protein_coding
chr15	55511700	55513716	55511700	55513716	-	transcript1868.chr15.nnic@NA	transcript1868.chr15.nnic	NA	55511700	55513716	Gene ID= novel_gene_chr15_1869 TPM= 2.34 Transcript Type= NA
chr15	55538884	55588454	55538884	55588454	-	transcript1870.chr15.nnic@PYGO1	transcript1870.chr15.nnic	protein_coding	55587835,55548910,55538884	55588454,55548995,55546588	Gene ID= ENSG00000171016.11 TPM= 2.34 Transcript Type= NA
chr15	55826922	55993746	55826922	55993746	-	ENST00000435532.7@NEDD4	ENST00000435532.7	protein_coding	55993511,55966473,55951511,55951376,55924646,55873958,55872415,55869579,55862913,55860661,55860407,55856131,55852424,55850542,55848806,55848521,55848372,55846969,55841934,55840606,55840447,55838509,55838107,55837789,55834227,55834038,55833008,55830514,55826922	55993746,55966546,55951589,55951414,55924699,55874008,55872476,55869681,55863079,55860778,55860574,55856196,55852543,55850742,55848886,55848575,55848430,55847034,55842163,55840727,55840517,55838604,55838180,55837849,55834286,55834145,55833104,55830586,55829999	Gene ID= ENSG00000069869.15 TPM= 25.1 Transcript Type= protein_coding
chr15	55826922	55993578	55826922	55993578	-	transcript1880.chr15.nnic@NEDD4	transcript1880.chr15.nnic	protein_coding	55993511,55966473,55951511,55951376,55924646,55873958,55872415,55869579,55862913,55860661,55860407,55856131,55852424,55850542,55848806,55848521,55848372,55841934,55840606,55840447,55838509,55838107,55837789,55834227,55834038,55833008,55830514,55826922	55993578,55966546,55951589,55951414,55924699,55874008,55872476,55869681,55863079,55860778,55860574,55856196,55852543,55850742,55848886,55848575,55848430,55842163,55840727,55840517,55838604,55838180,55837849,55834286,55834145,55833104,55830586,55829999	Gene ID= ENSG00000069869.15 TPM= 2.92 Transcript Type= NA
chr15	55962789	55993630	55962789	55993630	-	transcript1884.chr15.nic@NEDD4	transcript1884.chr15.nic	protein_coding	55993511,55962789	55993630,55966546	Gene ID= ENSG00000069869.15 TPM= 2.34 Transcript Type= NA
chr15	56090537	56096462	56090537	56096462	-	transcript1885.chr15.nnic@NA	transcript1885.chr15.nnic	NA	56090537	56096462	Gene ID= novel_gene_chr15_1886 TPM= 2.34 Transcript Type= NA
chr15	56428731	56465137	56428731	56465137	-	ENST00000260453.3@MNS1	ENST00000260453.3	protein_coding	56464970,56464026,56456394,56446841,56444444,56443638,56443430,56434138,56431373,56428731	56465137,56464247,56456521,56446943,56444673,56443854,56443537,56434395,56431498,56429193	Gene ID= ENSG00000138587.5 TPM= 3.5 Transcript Type= protein_coding
chr15	56630181	56734086	56630181	56734086	-	ENST00000559237.5@ZNF280D	ENST00000559237.5	protein_coding	56733458,56707263,56704121,56701173,56700933,56693098,56689300,56689041,56682254,56678664,56677574,56676670,56668823,56666679,56666395,56658424,56654385,56654198,56642952,56635195,56630181	56734086,56707306,56704267,56701238,56701072,56693215,56689470,56689150,56682477,56678821,56677674,56676816,56668957,56666986,56666535,56658486,56654503,56654234,56642997,56635250,56632122	Gene ID= ENSG00000137871.19 TPM= 3.5 Transcript Type= protein_coding
chr15	56697763	56733494	56697763	56733494	-	ENST00000558320.5@ZNF280D	ENST00000558320.5	protein_coding	56733458,56707263,56707082,56704121,56701173,56697763	56733494,56707306,56707143,56704267,56701238,56701072	Gene ID= ENSG00000137871.19 TPM= 3.5 Transcript Type= protein_coding
chr15	56916726	56918451	56916726	56918451	-	transcript1918.chr15.nnic@ZNF280D	transcript1918.chr15.nnic	protein_coding	56917995,56917540,56916726	56918451,56917694,56917212	Gene ID= ENSG00000137871.19 TPM= 2.34 Transcript Type= NA
chr15	56916726	56918493	56916726	56918493	-	ENST00000560587.1@ZNF280D	ENST00000560587.1	protein_coding	56917540,56916726	56918493,56917212	Gene ID= ENSG00000137871.19 TPM= 8.17 Transcript Type= processed_transcript
chr15	56918494	57288508	56918494	57288508	+	transcript1898.chr15.nnic@TCF12	transcript1898.chr15.nnic	protein_coding	56918494,56919892,56921026,57063750,57072653,57091789,57166402,57192158,57197773,57231152,57232291,57232712,57234043,57243472,57251350,57253262,57262094,57263112,57273030,57282445,57286157	56918906,56919988,56921098,57063823,57072714,57091891,57166466,57192293,57197825,57231257,57232430,57232856,57234107,57243550,57251423,57253468,57262208,57263274,57273262,57282598,57288508	Gene ID= ENSG00000140262.17 TPM= 8.76 Transcript Type= NA
chr15	56918639	57288508	56918639	57288508	+	transcript1910.chr15.nic@TCF12	transcript1910.chr15.nic	protein_coding	56918639,56919892,56921026,57091789,57166402,57192158,57197773,57231152,57232291,57232712,57234043,57243472,57251350,57253262,57262094,57263112,57273030,57282445,57286157	56918906,56919988,56921098,57091891,57166466,57192293,57197825,57231257,57232430,57232856,57234107,57243550,57251423,57253468,57262208,57263274,57273262,57282598,57288508	Gene ID= ENSG00000140262.17 TPM= 2.92 Transcript Type= NA
chr15	56918672	57098035	56918672	57098035	+	transcript1916.chr15.nic@TCF12	transcript1916.chr15.nic	protein_coding	56918672,56919892,56921026,57063750,57091789	56918906,56919988,56921098,57063823,57098035	Gene ID= ENSG00000140262.17 TPM= 4.67 Transcript Type= NA
chr15	56918625	57289853	56918625	57289853	+	ENST00000267811.9@TCF12	ENST00000267811.9	protein_coding	56918625,56919892,56921026,57063750,57091789,57166402,57192158,57197773,57231152,57232291,57232712,57234043,57243472,57251350,57253262,57262094,57263112,57273030,57282445,57286157	56918906,56919988,56921098,57063823,57091891,57166466,57192293,57197825,57231257,57232430,57232856,57234107,57243550,57251423,57253468,57262208,57263274,57273262,57282598,57289853	Gene ID= ENSG00000140262.17 TPM= 9.34 Transcript Type= protein_coding
chr15	56918694	57288508	56918694	57288508	+	ENST00000333725.9@TCF12	ENST00000333725.9	protein_coding	56918694,56919892,56921026,57063750,57091789,57166402,57192158,57197773,57231152,57232291,57232712,57234043,57243472,57251350,57252421,57253262,57262094,57263112,57273030,57282445,57286157	56918906,56919988,56921098,57063823,57091891,57166466,57192293,57197825,57231257,57232430,57232856,57234107,57243550,57251423,57252492,57253468,57262208,57263274,57273262,57282598,57288508	Gene ID= ENSG00000140262.17 TPM= 1.75 Transcript Type= protein_coding
chr15	57219466	57288506	57219466	57288506	+	ENST00000343827.7@TCF12	ENST00000343827.7	protein_coding	57219466,57231152,57232291,57232712,57234043,57243472,57251350,57253262,57262094,57263112,57273030,57282445,57286157	57219590,57231257,57232430,57232856,57234107,57243550,57251423,57253468,57262208,57263274,57273262,57282598,57288506	Gene ID= ENSG00000140262.17 TPM= 5.25 Transcript Type= protein_coding
chr15	57223645	57225397	57223645	57225397	-	transcript1920.chr15.nnic@NA	transcript1920.chr15.nnic	NA	57223645	57225397	Gene ID= novel_gene_chr15_1921 TPM= 2.34 Transcript Type= NA
chr15	57300365	57307761	57300365	57307761	+	ENST00000501726.1@LINC00926	ENST00000501726.1	lincRNA	57300365,57305319,57307542	57300924,57307068,57307761	Gene ID= ENSG00000247982.6 TPM= 1.17 Transcript Type= lincRNA
chr15	57376505	57550727	57376505	57550727	+	transcript1923.chr15.nnic@CGNL1	transcript1923.chr15.nnic	protein_coding	57376505,57402661,57406973,57437985,57440377,57442373,57451500,57452141,57453683,57461680,57516780,57518393,57523489,57524581,57528654,57531690,57543696,57544473,57545592,57546076,57547355	57376567,57402714,57407102,57439601,57440471,57442478,57451601,57452289,57453818,57461892,57516986,57518497,57523641,57524751,57528815,57531779,57543779,57544597,57545700,57546239,57550727	Gene ID= ENSG00000128849.10 TPM= 13.63 Transcript Type= NA
chr15	57376505	57550727	57376505	57550727	+	transcript1924.chr15.nnic@CGNL1	transcript1924.chr15.nnic	protein_coding	57376505,57402661,57437985,57440377,57442373,57451500,57452141,57453683,57461680,57516780,57518393,57523489,57524581,57528654,57531690,57543696,57544473,57545592,57546076,57547355	57376567,57402714,57439601,57440471,57442478,57451601,57452289,57453818,57461892,57516986,57518497,57523641,57524751,57528815,57531779,57543779,57544597,57545700,57546239,57550727	Gene ID= ENSG00000128849.10 TPM= 18.3 Transcript Type= NA
chr15	57376505	57550727	57376505	57550727	+	ENST00000281282.5@CGNL1	ENST00000281282.5	protein_coding	57376505,57437985,57440377,57442373,57451500,57452141,57453683,57461680,57516780,57518393,57523489,57524581,57528654,57531690,57543696,57544473,57545592,57546076,57547355	57376567,57439601,57440471,57442478,57451601,57452289,57453818,57461892,57516986,57518497,57523641,57524751,57528815,57531779,57543779,57544597,57545700,57546239,57550727	Gene ID= ENSG00000128849.10 TPM= 19.46 Transcript Type= protein_coding
chr15	57591884	57650060	57591884	57650060	+	transcript1938.chr15.nic@GCOM1	transcript1938.chr15.nic	protein_coding	57591884,57604269,57618033,57621608,57625779,57629702,57632434,57633613,57637695,57639440,57646137	57592109,57604355,57618188,57621700,57625892,57629854,57632559,57633741,57637774,57639545,57650060	Gene ID= ENSG00000137878.16 TPM= 9.34 Transcript Type= NA
chr15	57591889	57685360	57591889	57685360	+	transcript1933.chr15.nnic@MYZAP	transcript1933.chr15.nnic	protein_coding	57591889,57599619,57604269,57618033,57621608,57625779,57629702,57632434,57633613,57637695,57639440,57661450,57674968,57684402	57592109,57599703,57604355,57618188,57621700,57625892,57629854,57632559,57633741,57637774,57639545,57661533,57675068,57685360	Gene ID= ENSG00000263155.5 TPM= 6.42 Transcript Type= NA
chr15	57591941	57685364	57591941	57685364	+	ENST00000267853.9@MYZAP	ENST00000267853.9	protein_coding	57591941,57604269,57618033,57621608,57625779,57629702,57632434,57633613,57637695,57639440,57661450,57674968,57684402	57592109,57604355,57618188,57621700,57625892,57629854,57632559,57633741,57637774,57639545,57661533,57675068,57685364	Gene ID= ENSG00000263155.5 TPM= 169.88 Transcript Type= protein_coding
chr15	57592033	57685360	57592033	57685360	+	ENST00000380565.8@MYZAP	ENST00000380565.8	protein_coding	57592033,57604269,57618033,57621608,57625779,57629702,57632434,57633613,57637695,57639440,57674968,57684402	57592109,57604355,57618188,57621700,57625892,57629854,57632559,57633741,57637774,57639545,57675068,57685360	Gene ID= ENSG00000263155.5 TPM= 4.09 Transcript Type= protein_coding
chr15	57706629	57717557	57706629	57717557	+	ENST00000299638.7@POLR2M	ENST00000299638.7	protein_coding	57706629,57708714,57711984,57714536	57706955,57709358,57712188,57717557	Gene ID= ENSG00000255529.7 TPM= 48.07 Transcript Type= protein_coding
chr15	57707016	57717554	57707016	57717554	+	transcript1948.chr15.nic@POLR2M	transcript1948.chr15.nic	protein_coding	57707016,57708714,57711984,57714536	57707141,57709358,57712188,57717554	Gene ID= ENSG00000255529.7 TPM= 4.87 Transcript Type= NA
chr15	57706725	57717554	57706725	57717554	+	ENST00000380557.4@POLR2M	ENST00000380557.4	protein_coding	57706725,57709185,57711984,57714536	57706955,57709358,57712188,57717554	Gene ID= ENSG00000255529.7 TPM= 3.12 Transcript Type= protein_coding
chr15	57953424	58065923	57953424	58065923	-	ENST00000537372.5@ALDH1A2	ENST00000537372.5	protein_coding	58065534,58058012,58014177,58013858,58010649,57995078,57992945,57992705,57965725,57963885,57962012,57961137,57960770,57953424	58065923,58058108,58014281,58013998,58010778,57995139,57993073,57992818,57965827,57964069,57962176,57961294,57960844,57955269	Gene ID= ENSG00000128918.14 TPM= 4.67 Transcript Type= protein_coding
chr15	57953424	58066418	57953424	58066418	-	ENST00000249750.8@ALDH1A2	ENST00000249750.8	protein_coding	58065534,58014177,58013858,58010649,57995078,57992945,57992705,57965725,57963885,57962012,57961137,57960770,57953424	58066418,58014281,58013998,58010778,57995139,57993073,57992818,57965827,57964069,57962176,57961294,57960844,57955269	Gene ID= ENSG00000128918.14 TPM= 74.73 Transcript Type= protein_coding
chr15	58138196	58185911	58138196	58185911	+	ENST00000219919.8@AQP9	ENST00000219919.8	protein_coding	58138196,58166673,58173068,58174918,58179128,58183961	58138676,58166799,58173205,58175036,58179345,58185911	Gene ID= ENSG00000103569.9 TPM= 57.21 Transcript Type= protein_coding
chr15	58140199	58143753	58140199	58143753	-	transcript1964.chr15.nnic@NA	transcript1964.chr15.nnic	NA	58140199	58143753	Gene ID= novel_gene_chr15_1965 TPM= 8.17 Transcript Type= NA
chr15	58588807	58749978	58588807	58749978	-	ENST00000260408.7@ADAM10	ENST00000260408.7	protein_coding	58749480,58717577,58682196,58679124,58665097,58646055,58643886,58640777,58633196,58627700,58621471,58611808,58610999,58610297,58599598,58588807	58749978,58717727,58682314,58679282,58665197,58646204,58643978,58640960,58633359,58627883,58621621,58611991,58611107,58610517,58599724,58597641	Gene ID= ENSG00000137845.14 TPM= 18.68 Transcript Type= protein_coding
chr15	58595394	58749842	58595394	58749842	-	transcript1974.chr15.nnic@ADAM10	transcript1974.chr15.nnic	protein_coding	58749480,58717577,58682196,58679124,58665097,58646055,58640777,58633196,58627700,58621471,58611808,58610999,58610297,58599598,58595394	58749842,58717727,58682314,58679282,58665197,58646204,58640960,58633359,58627883,58621621,58611991,58611107,58610517,58599724,58597641	Gene ID= ENSG00000137845.14 TPM= 9.34 Transcript Type= NA
chr15	58771362	58857533	58771362	58857533	+	ENST00000450403.3@MINDY2	ENST00000450403.3	protein_coding	58771362,58787906,58802313,58810230,58821717,58831774,58847297,58851771,58854485	58772235,58787963,58802377,58810388,58821819,58831916,58847470,58851965,58857533	Gene ID= ENSG00000128923.10 TPM= 5.84 Transcript Type= protein_coding
chr15	58879045	58933705	58879045	58933705	-	transcript1994.chr15.nic@SLTM	transcript1994.chr15.nic	protein_coding	58933404,58932356,58916935,58913499,58912563,58901260,58899469,58898803,58897115,58894433,58894090,58893821,58893279,58892897,58890281,58889430,58888385,58887226,58886975,58883626,58879045	58933705,58932443,58916999,58913696,58912610,58901287,58899709,58898852,58897233,58894582,58894193,58893987,58893364,58893060,58890461,58889554,58888555,58887540,58887119,58883786,58880107	Gene ID= ENSG00000137776.16 TPM= 2.34 Transcript Type= NA
chr15	58879045	58933347	58879045	58933347	-	transcript1995.chr15.nnic@SLTM	transcript1995.chr15.nnic	protein_coding	58933050,58932356,58916935,58913499,58912563,58901260,58899469,58898803,58897115,58894433,58894090,58893821,58893279,58892897,58890281,58889430,58888385,58887226,58886975,58883626,58879045	58933347,58932443,58916999,58913696,58912610,58901287,58899883,58898852,58897233,58894582,58894193,58893987,58893364,58893060,58890461,58889554,58888555,58887540,58887119,58883786,58880107	Gene ID= ENSG00000137776.16 TPM= 3.5 Transcript Type= NA
chr15	58879045	58933705	58879045	58933705	-	transcript1996.chr15.nic@SLTM	transcript1996.chr15.nic	protein_coding	58933404,58932356,58916935,58913499,58912563,58901260,58899469,58898803,58897115,58894433,58894090,58893821,58893279,58892897,58890281,58889430,58888385,58887226,58886975,58883626,58879045	58933705,58932443,58916999,58913696,58912610,58901287,58899883,58898852,58897233,58894582,58894193,58893987,58893364,58893060,58890461,58889554,58888555,58887540,58887119,58883786,58880107	Gene ID= ENSG00000137776.16 TPM= 10.51 Transcript Type= NA
chr15	58879045	58933347	58879045	58933347	-	transcript1997.chr15.nnic@SLTM	transcript1997.chr15.nnic	protein_coding	58933050,58932356,58916935,58913499,58912563,58901260,58899469,58898803,58897115,58894433,58894090,58893821,58893279,58892897,58890281,58889430,58888385,58887226,58886975,58883626,58879045	58933347,58932443,58916999,58913696,58912610,58901287,58899937,58898852,58897233,58894582,58894193,58893987,58893364,58893060,58890461,58889554,58888555,58887540,58887119,58883786,58880107	Gene ID= ENSG00000137776.16 TPM= 2.34 Transcript Type= NA
chr15	58879045	58933617	58879045	58933617	-	transcript2010.chr15.nic@SLTM	transcript2010.chr15.nic	protein_coding	58933404,58932356,58916935,58913499,58912563,58901260,58898803,58897115,58894433,58894090,58893821,58893279,58892897,58890281,58889430,58888385,58887226,58886975,58883626,58879045	58933617,58932443,58916999,58913696,58912610,58901287,58898852,58897233,58894582,58894193,58893987,58893364,58893060,58890461,58889554,58888555,58887540,58887119,58883786,58880107	Gene ID= ENSG00000137776.16 TPM= 2.34 Transcript Type= NA
chr15	58879045	58933705	58879045	58933705	-	transcript2019.chr15.nic@SLTM	transcript2019.chr15.nic	protein_coding	58933404,58932356,58916935,58901260,58899469,58898803,58897115,58894433,58894090,58893821,58893279,58892897,58890281,58889430,58888385,58887226,58886975,58883626,58879045	58933705,58932443,58916999,58901287,58899937,58898852,58897233,58894582,58894193,58893987,58893364,58893060,58890461,58889554,58888555,58887540,58887119,58883786,58880107	Gene ID= ENSG00000137776.16 TPM= 2.34 Transcript Type= NA
chr15	58879045	58933635	58879045	58933635	-	transcript2021.chr15.nic@SLTM	transcript2021.chr15.nic	protein_coding	58933404,58932356,58916935,58912563,58901260,58898803,58897115,58894433,58894090,58893821,58893279,58892897,58890281,58889430,58888385,58887226,58886975,58883626,58879045	58933635,58932443,58916999,58913696,58901287,58898852,58897233,58894582,58894193,58893987,58893364,58893060,58890461,58889554,58888555,58887540,58887119,58883786,58880107	Gene ID= ENSG00000137776.16 TPM= 2.34 Transcript Type= NA
chr15	58879045	58933600	58879045	58933600	-	transcript2022.chr15.nnic@SLTM	transcript2022.chr15.nnic	protein_coding	58933404,58932356,58916935,58913499,58912563,58901260,58898803,58897115,58894090,58893821,58893279,58892897,58890281,58889430,58888385,58887226,58886975,58883626,58879045	58933600,58932443,58916999,58913696,58912610,58901287,58898852,58897233,58894193,58893987,58893364,58893060,58890461,58889554,58888555,58887540,58887119,58883786,58880107	Gene ID= ENSG00000137776.16 TPM= 2.34 Transcript Type= NA
chr15	58879045	58933631	58879045	58933631	-	transcript2024.chr15.nic@SLTM	transcript2024.chr15.nic	protein_coding	58933404,58932356,58916935,58913499,58912563,58901260,58898803,58897115,58894433,58894090,58893821,58893279,58892897,58889430,58888385,58887226,58886975,58883626,58879045	58933631,58932443,58916999,58913696,58912610,58901287,58898852,58897233,58894582,58894193,58893987,58893364,58893060,58889554,58888555,58887540,58887119,58883786,58880107	Gene ID= ENSG00000137776.16 TPM= 2.34 Transcript Type= NA
chr15	58879045	58933653	58879045	58933653	-	ENST00000380516.6@SLTM	ENST00000380516.6	protein_coding	58933404,58932356,58916935,58913499,58912563,58901260,58899469,58898803,58897115,58894433,58894090,58893821,58893279,58892897,58890281,58889430,58888385,58887226,58886975,58883626,58879045	58933653,58932443,58916999,58913696,58912610,58901287,58899937,58898852,58897233,58894582,58894193,58893987,58893364,58893060,58890461,58889554,58888555,58887540,58887119,58883786,58880107	Gene ID= ENSG00000137776.16 TPM= 24.52 Transcript Type= protein_coding
chr15	58987655	59097419	58987655	59097419	+	ENST00000348370.8@RNF111	ENST00000348370.8	protein_coding	58987655,59030804,59052305,59055682,59058356,59066764,59075954,59080936,59084129,59085659,59089667,59091059,59092537,59094783	58988068,59031702,59052431,59055845,59058550,59067083,59076215,59081284,59084254,59085785,59089759,59091154,59092640,59097419	Gene ID= ENSG00000157450.15 TPM= 3.5 Transcript Type= protein_coding
chr15	58987671	59069093	58987671	59069093	+	transcript2043.chr15.nic@RNF111	transcript2043.chr15.nic	protein_coding	58987671,59030804,59052305,59055682,59058356,59066764	58988068,59031702,59052431,59055845,59058550,59069093	Gene ID= ENSG00000157450.15 TPM= 2.34 Transcript Type= NA
chr15	59132434	59372900	59132434	59372900	-	ENST00000288235.8@MYO1E	ENST00000288235.8	protein_coding	59372498,59272306,59261420,59256284,59236585,59231702,59227459,59224689,59223059,59217891,59214640,59214228,59210514,59208681,59205400,59202326,59195461,59188118,59178393,59174126,59173746,59171897,59163157,59161073,59158287,59153590,59138198,59132434	59372900,59272449,59261509,59256378,59236672,59231791,59227590,59224823,59223191,59218087,59214720,59214314,59210600,59208848,59205485,59202407,59195567,59188216,59178537,59174240,59173915,59172042,59163303,59161230,59158379,59153791,59138367,59137456	Gene ID= ENSG00000157483.8 TPM= 19.85 Transcript Type= protein_coding
chr15	59371437	59372871	59371437	59372871	-	transcript2054.chr15.nnic@NA	transcript2054.chr15.nnic	NA	59371437	59372871	Gene ID= novel_gene_chr15_2055 TPM= 3.5 Transcript Type= NA
chr15	59611784	59622723	59611784	59622723	+	ENST00000396065.2@GCNT3	ENST00000396065.2	protein_coding	59611784,59616692,59618179	59611981,59616881,59622723	Gene ID= ENSG00000140297.12 TPM= 2.34 Transcript Type= protein_coding
chr15	59638062	59657538	59638062	59657538	-	ENST00000396060.6@GTF2A2	ENST00000396060.6	protein_coding	59657406,59652206,59650669,59642136,59638062	59657538,59652326,59650773,59642262,59639157	Gene ID= ENSG00000140307.10 TPM= 3.5 Transcript Type= protein_coding
chr15	59662893	59689353	59662893	59689353	-	transcript2062.chr15.nic@BNIP2	transcript2062.chr15.nic	protein_coding	59689135,59682408,59680241,59679592,59677911,59672637,59671183,59669276,59668892,59668103,59665350,59662893	59689353,59682514,59680308,59679768,59678087,59672739,59671314,59669362,59668990,59668138,59665442,59664120	Gene ID= ENSG00000140299.11 TPM= 3.5 Transcript Type= NA
chr15	59659146	59689353	59659146	59689353	-	transcript2063.chr15.nic@BNIP2	transcript2063.chr15.nic	protein_coding	59689135,59682408,59680241,59679592,59677911,59672637,59671183,59669276,59668892,59668103,59659146	59689353,59682514,59680308,59679768,59678087,59672739,59671314,59669362,59668990,59668138,59664120	Gene ID= ENSG00000140299.11 TPM= 22.18 Transcript Type= NA
chr15	59659146	59689534	59659146	59689534	-	ENST00000267859.7@BNIP2	ENST00000267859.7	protein_coding	59689135,59682408,59680241,59679592,59677911,59672637,59671183,59669276,59668892,59659146	59689534,59682514,59680308,59679768,59678087,59672739,59671314,59669362,59668990,59664120	Gene ID= ENSG00000140299.11 TPM= 24.52 Transcript Type= protein_coding
chr15	59662865	59689443	59662865	59689443	-	ENST00000612191.4@BNIP2	ENST00000612191.4	protein_coding	59689135,59682408,59680241,59679592,59677911,59672637,59671183,59669276,59668892,59662865	59689443,59682514,59680308,59679768,59678087,59672739,59671314,59669362,59668990,59664120	Gene ID= ENSG00000140299.11 TPM= 46.7 Transcript Type= protein_coding
chr15	59768352	59769146	59768352	59769146	+	ENST00000484430.1@RPS3AP6	ENST00000484430.1	processed_pseudogene	59768352	59769146	Gene ID= ENSG00000234797.5 TPM= 8.17 Transcript Type= processed_pseudogene
chr15	60347134	60397986	60347134	60397986	-	ENST00000396024.7@ANXA2	ENST00000396024.7	protein_coding	60397943,60390213,60386028,60382342,60364429,60360941,60357146,60355919,60354154,60352383,60351724,60351193,60349075,60347134	60397986,60390317,60386086,60382441,60364523,60361054,60357236,60355998,60354213,60352476,60351819,60351251,60349197,60347689	Gene ID= ENSG00000182718.16 TPM= 4.9 Transcript Type= protein_coding
chr15	60347332	60397985	60347332	60397985	-	ENST00000332680.8@ANXA2	ENST00000332680.8	protein_coding	60397871,60386028,60382342,60364429,60360941,60357146,60355919,60354154,60352383,60351724,60351193,60349075,60347332	60397985,60386086,60382441,60364523,60361054,60357236,60355998,60354213,60352476,60351819,60351251,60349197,60347689	Gene ID= ENSG00000182718.16 TPM= 24.78 Transcript Type= protein_coding
chr15	60347327	60398043	60347327	60398043	-	ENST00000451270.6@ANXA2	ENST00000451270.6	protein_coding	60397943,60386028,60382342,60364429,60360941,60357146,60355919,60354154,60352383,60351724,60351193,60349075,60347327	60398043,60386086,60382441,60364523,60361054,60357236,60355998,60354213,60352476,60351819,60351251,60349197,60347689	Gene ID= ENSG00000182718.16 TPM= 1582.81 Transcript Type= protein_coding
chr15	60395907	60397988	60395907	60397988	-	ENST00000560495.1@ANXA2	ENST00000560495.1	protein_coding	60397943,60395907	60397988,60396427	Gene ID= ENSG00000182718.16 TPM= 1.17 Transcript Type= processed_transcript
chr15	60347342	60397986	60347342	60397986	-	ENST00000421017.6@ANXA2	ENST00000421017.6	protein_coding	60397943,60397258,60386028,60382342,60364429,60360941,60357146,60355919,60354154,60352383,60351724,60351193,60349075,60347342	60397986,60397338,60386086,60382441,60364523,60361054,60357236,60355998,60354213,60352476,60351819,60351251,60349197,60347689	Gene ID= ENSG00000182718.16 TPM= 262.77 Transcript Type= protein_coding
chr15	60388598	60395459	60388598	60395459	-	transcript2107.chr15.nnic@NA	transcript2107.chr15.nnic	NA	60388598	60395459	Gene ID= novel_gene_chr15_2108 TPM= 12.84 Transcript Type= NA
chr15	60419613	60479160	60419613	60479160	-	ENST00000558181.5@ICE2	ENST00000558181.5	protein_coding	60479003,60477937,60476063,60468061,60466594,60456657,60455326,60455003,60453603,60448848,60447970,60442416,60436143,60431934,60428429,60419613	60479160,60478069,60476167,60468162,60466713,60456794,60455442,60455162,60453784,60449841,60448145,60442545,60436227,60431984,60428687,60423762	Gene ID= ENSG00000128915.11 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr15	60419609	60479145	60419609	60479145	-	ENST00000261520.8@ICE2	ENST00000261520.8	protein_coding	60479003,60477937,60476063,60468061,60466594,60456657,60455326,60455003,60453603,60448848,60447970,60442416,60436143,60431934,60428429,60419609	60479145,60478069,60476167,60468322,60466713,60456794,60455442,60455162,60453784,60449841,60448145,60442545,60436227,60431984,60428687,60423762	Gene ID= ENSG00000128915.11 TPM= 1.17 Transcript Type= protein_coding
chr15	61852389	62060473	61852389	62060473	-	ENST00000249837.7@VPS13C	ENST00000249837.7	protein_coding	62060275,62044212,62041324,62034957,62033441,62023411,62020479,62013933,62013039,62012107,62010472,62008655,62007308,62000564,61991673,61991000,61984857,61983820,61982459,61981342,61978626,61977082,61974288,61973454,61972625,61969299,61967368,61966083,61964699,61963835,61962749,61962371,61961589,61959448,61958608,61954421,61951824,61950945,61950358,61949443,61947193,61946307,61945715,61941763,61940647,61936597,61934219,61931090,61929501,61927091,61925456,61922397,61921947,61920498,61920067,61919289,61918136,61917341,61915633,61913311,61911840,61910177,61908992,61907264,61890165,61884128,61882596,61881747,61881563,61880843,61880609,61878607,61876973,61875732,61874876,61873246,61871989,61869500,61868659,61863440,61856286,61854871,61852389	62060473,62044255,62041366,62035052,62033542,62023520,62020538,62013992,62013119,62012164,62010599,62008761,62007479,62000626,61991802,61991094,61984999,61984012,61982573,61981478,61978749,61977199,61974417,61973532,61972764,61969452,61967447,61966142,61964861,61963951,61962852,61962538,61961893,61959595,61958716,61954554,61951980,61951024,61950417,61949605,61947309,61946410,61945882,61942067,61940794,61936750,61934331,61931259,61929748,61927320,61925548,61922762,61922033,61920647,61920331,61919449,61918257,61917635,61916022,61913415,61912004,61910305,61909125,61907390,61890400,61884269,61882736,61881828,61881632,61880954,61880722,61878746,61877054,61875845,61874951,61873409,61872034,61869623,61868773,61863528,61856409,61854954,61854558	Gene ID= ENSG00000129003.15 TPM= 21.02 Transcript Type= protein_coding
chr15	62057432	62060491	62057432	62060491	-	transcript2132.chr15.nnic@NA	transcript2132.chr15.nnic	NA	62057432	62060491	Gene ID= novel_gene_chr15_2133 TPM= 4.67 Transcript Type= NA
chr15	62163535	62165283	62163535	62165283	-	ENST00000380392.3@C2CD4B	ENST00000380392.3	protein_coding	62165195,62163535	62165283,62165024	Gene ID= ENSG00000205502.3 TPM= 15.18 Transcript Type= protein_coding
chr15	63048327	63071915	63048327	63071915	+	transcript2162.chr15.nic@TPM1	transcript2162.chr15.nic	protein_coding	63048327,63056985,63059563,63060869,63061713,63062215,63062576,63071090	63048707,63057118,63059680,63060939,63061788,63062277,63062645,63071915	Gene ID= ENSG00000140416.19 TPM= 18.07 Transcript Type= NA
chr15	63042685	63071889	63042685	63071889	+	ENST00000358278.7@TPM1	ENST00000358278.7	protein_coding	63042685,63044027,63056985,63059563,63060869,63061198,63062215,63062576,63071090	63042943,63044152,63057118,63059680,63060939,63061273,63062277,63062645,63071889	Gene ID= ENSG00000140416.19 TPM= 43.2 Transcript Type= protein_coding
chr15	63042758	63071915	63042758	63071915	+	ENST00000267996.11@TPM1	ENST00000267996.11	protein_coding	63042758,63043706,63056985,63059563,63060869,63061713,63062215,63062576,63071090	63042943,63043831,63057118,63059680,63060939,63061788,63062277,63062645,63071915	Gene ID= ENSG00000140416.19 TPM= 75.29 Transcript Type= protein_coding
chr15	63042758	63071900	63042758	63071900	+	ENST00000559397.5@TPM1	ENST00000559397.5	protein_coding	63042758,63043706,63056985,63059563,63060869,63061198,63062215,63062576,63071090	63042943,63043831,63057118,63059680,63060939,63061273,63062277,63062645,63071900	Gene ID= ENSG00000140416.19 TPM= 23.52 Transcript Type= protein_coding
chr15	63048467	63071884	63048467	63071884	+	ENST00000404484.8@TPM1	ENST00000404484.8	protein_coding	63048467,63056985,63059563,63060869,63061198,63062215,63062576,63071090	63048707,63057118,63059680,63060939,63061273,63062277,63062645,63071884	Gene ID= ENSG00000140416.19 TPM= 75.89 Transcript Type= protein_coding
chr15	63068528	63071913	63068528	63071913	+	transcript2178.chr15.nnic@NA	transcript2178.chr15.nnic	NA	63068528	63071913	Gene ID= novel_gene_chr15_2179 TPM= 4.67 Transcript Type= NA
chr15	63121822	63142061	63121822	63142061	+	transcript2182.chr15.nnic@LACTB	transcript2182.chr15.nnic	protein_coding	63121822,63122085,63122636,63126859,63127353,63129485,63141280	63121976,63122228,63122702,63127049,63127689,63129650,63142061	Gene ID= ENSG00000103642.11 TPM= 4.09 Transcript Type= NA
chr15	63121800	63142061	63121800	63142061	+	ENST00000261893.8@LACTB	ENST00000261893.8	protein_coding	63121800,63122636,63126859,63127353,63129485,63141280	63122228,63122702,63127049,63127689,63129650,63142061	Gene ID= ENSG00000103642.11 TPM= 53.13 Transcript Type= protein_coding
chr15	63121822	63131471	63121822	63131471	+	transcript2187.chr15.nnic@LACTB	transcript2187.chr15.nnic	protein_coding	63121822,63122085,63122636,63126859,63127353,63129485	63121976,63122228,63122702,63127049,63127689,63131471	Gene ID= ENSG00000103642.11 TPM= 2.34 Transcript Type= NA
chr15	63121799	63129747	63121799	63129747	+	transcript2190.chr15.nic@LACTB	transcript2190.chr15.nic	protein_coding	63121799,63122636,63126859,63127353	63122228,63122702,63127049,63129747	Gene ID= ENSG00000103642.11 TPM= 2.34 Transcript Type= NA
chr15	63121833	63131471	63121833	63131471	+	ENST00000413507.3@LACTB	ENST00000413507.3	protein_coding	63121833,63122636,63126859,63127353,63129485	63122228,63122702,63127049,63127689,63131471	Gene ID= ENSG00000103642.11 TPM= 3.5 Transcript Type= protein_coding
chr15	63148250	63157802	63148250	63157802	-	ENST00000330964.9@RPS27L	ENST00000330964.9	protein_coding	63157400,63156413,63155621,63148250	63157802,63156521,63155731,63154060	Gene ID= ENSG00000185088.13 TPM= 91.07 Transcript Type= protein_coding
chr15	63189469	63267782	63189469	63267782	+	ENST00000321437.8@RAB8B	ENST00000321437.8	protein_coding	63189469,63244756,63249645,63255507,63256505,63259627,63262692,63263527	63189748,63244816,63249705,63255584,63256594,63259692,63262742,63267782	Gene ID= ENSG00000166128.12 TPM= 85.23 Transcript Type= protein_coding
chr15	63277554	63309126	63277554	63309126	+	ENST00000261879.9@APH1B	ENST00000261879.9	protein_coding	63277554,63279161,63286558,63287424,63302345,63305614	63277736,63279331,63286628,63287546,63302472,63309126	Gene ID= ENSG00000138613.13 TPM= 16.35 Transcript Type= protein_coding
chr15	63321378	63382161	63321378	63382161	-	ENST00000178638.7@CA12	ENST00000178638.7	protein_coding	63381636,63375658,63346530,63345477,63342002,63340720,63340288,63338819,63328098,63327149,63321378	63382161,63375678,63346709,63345619,63342097,63340783,63340445,63338945,63328130,63327233,63326357	Gene ID= ENSG00000074410.13 TPM= 3.5 Transcript Type= protein_coding
chr15	63502843	63505255	63502843	63505255	-	transcript2236.chr15.nnic@NA	transcript2236.chr15.nnic	NA	63502843	63505255	Gene ID= novel_gene_chr15_2237 TPM= 4.67 Transcript Type= NA
chr15	63504625	63594640	63504625	63594640	+	transcript2222.chr15.nnic@USP3	transcript2222.chr15.nnic	protein_coding	63504625,63532647,63537025,63553715,63556667,63558106,63559857,63562895,63567213,63570433,63574046,63574323,63588305,63588702,63588944,63590661	63504830,63532707,63537156,63553798,63556748,63558188,63559970,63563008,63567317,63570579,63574152,63574403,63588423,63588815,63589011,63594640	Gene ID= ENSG00000140455.16 TPM= 4.09 Transcript Type= NA
chr15	63504611	63591467	63504611	63591467	+	ENST00000380324.7@USP3	ENST00000380324.7	protein_coding	63504611,63532647,63537025,63553715,63556667,63558106,63559857,63562895,63570433,63574046,63574323,63588305,63588702,63588944,63590661	63504830,63532707,63537156,63553798,63556748,63558188,63559970,63563008,63570579,63574152,63574403,63588423,63588815,63589011,63591467	Gene ID= ENSG00000140455.16 TPM= 24.52 Transcript Type= protein_coding
chr15	63504635	63591444	63504635	63591444	+	ENST00000558157.5@USP3	ENST00000558157.5	protein_coding	63504635,63529014,63532647,63537025,63553715,63556667,63558106,63559857,63562895,63570433,63574046,63574323,63588305,63588702,63588944,63590661	63504830,63529166,63532707,63537156,63553798,63556748,63558188,63559970,63563008,63570579,63574152,63574403,63588423,63588815,63589011,63591444	Gene ID= ENSG00000140455.16 TPM= 7.01 Transcript Type= nonsense_mediated_decay
chr15	63504734	63594640	63504734	63594640	+	ENST00000559192.5@USP3	ENST00000559192.5	protein_coding	63504734,63532647,63533803,63537025,63553715,63556667,63558106,63559857,63562895,63570433,63574046,63574323,63588305,63588702,63588944,63590661	63504830,63532707,63533918,63537156,63553798,63556748,63558188,63559970,63563008,63570579,63574152,63574403,63588423,63588815,63589011,63594640	Gene ID= ENSG00000140455.16 TPM= 2.92 Transcript Type= nonsense_mediated_decay
chr15	63504601	63506355	63504601	63506355	+	transcript2234.chr15.nnic@NA	transcript2234.chr15.nnic	NA	63504601	63506355	Gene ID= novel_gene_chr15_2235 TPM= 2.34 Transcript Type= NA
chr15	63757263	63833986	63757263	63833986	-	transcript2243.chr15.nic@HERC1	transcript2243.chr15.nic	protein_coding	63833827,63774694,63764096,63757263	63833986,63775649,63764191,63758369	Gene ID= ENSG00000103657.13 TPM= 2.34 Transcript Type= NA
chr15	63763580	63833986	63763580	63833986	-	transcript2244.chr15.nic@HERC1	transcript2244.chr15.nic	protein_coding	63833827,63774694,63763580	63833986,63775649,63764191	Gene ID= ENSG00000103657.13 TPM= 2.34 Transcript Type= NA
chr15	63608618	63833888	63608618	63833888	-	ENST00000443617.6@HERC1	ENST00000443617.6	protein_coding	63833827,63774694,63764096,63758175,63756437,63755229,63754505,63752958,63749647,63749367,63747724,63746918,63734724,63732924,63729497,63729236,63727647,63725292,63723182,63718783,63718574,63716302,63713353,63712775,63706780,63698728,63696124,63694774,63694312,63693964,63692411,63690541,63689589,63686359,63680537,63680077,63677845,63674342,63672496,63669538,63666356,63665919,63664470,63662984,63661753,63660973,63659736,63658544,63656088,63655742,63654119,63652414,63651253,63649725,63648069,63645483,63644992,63643404,63642957,63641470,63640152,63638711,63638411,63637505,63635961,63634733,63633848,63632709,63630466,63628677,63625985,63624158,63623725,63622815,63616430,63615768,63612251,63608618	63833888,63775649,63764191,63758369,63756748,63755325,63754648,63753085,63749791,63749538,63747858,63747083,63734849,63733145,63729649,63729368,63727838,63725513,63723355,63718897,63718694,63716473,63713665,63712895,63706831,63698996,63696339,63694894,63694549,63694157,63692566,63690647,63689699,63686535,63680776,63680160,63678365,63675117,63672694,63669698,63666472,63666150,63664594,63663204,63662021,63661025,63659936,63658718,63656358,63655955,63654324,63652541,63651380,63649925,63648199,63645682,63645097,63643550,63643058,63641643,63640445,63638776,63638536,63637643,63636142,63634888,63633970,63632811,63630635,63628815,63626154,63624327,63623890,63622891,63616682,63615920,63612556,63609266	Gene ID= ENSG00000103657.13 TPM= 16.35 Transcript Type= protein_coding
chr15	63907036	64046448	63907036	64046448	-	transcript2277.chr15.nnic@DAPK2	transcript2277.chr15.nnic	protein_coding	64046298,64040170,63983533,63971423,63939232,63927912,63925941,63924816,63912108,63911908,63907036	64046448,64040267,63983754,63971561,63939361,63930455,63927756,63924861,63912197,63911991,63908600	Gene ID= ENSG00000035664.11 TPM= 4.67 Transcript Type= NA
chr15	63907036	64046448	63907036	64046448	-	transcript2278.chr15.nnic@DAPK2	transcript2278.chr15.nnic	protein_coding	64046298,64040170,63983533,63971423,63939232,63930407,63929551,63925941,63912108,63911908,63907036	64046448,64040267,63983754,63971561,63939361,63930455,63929577,63926093,63912197,63911991,63908600	Gene ID= ENSG00000035664.11 TPM= 7.79 Transcript Type= NA
chr15	63907036	64046459	63907036	64046459	-	transcript2279.chr15.nic@DAPK2	transcript2279.chr15.nic	protein_coding	64046298,64040170,63983533,63971423,63939232,63930407,63929551,63925941,63924816,63912108,63907036	64046459,64040267,63983754,63971561,63939361,63930455,63929577,63926093,63924861,63912197,63911991	Gene ID= ENSG00000035664.11 TPM= 8.17 Transcript Type= NA
chr15	63907923	64046322	63907923	64046322	-	ENST00000457488.5@DAPK2	ENST00000457488.5	protein_coding	64046298,64040170,63983533,63971423,63939232,63930407,63929551,63925941,63924816,63912108,63911908,63907923	64046322,64040267,63983754,63971561,63939361,63930455,63929577,63926093,63924861,63912197,63911991,63908600	Gene ID= ENSG00000035664.11 TPM= 7.01 Transcript Type= protein_coding
chr15	64072559	64094018	64072559	64094018	-	ENST00000300030.7@FAM96A	ENST00000300030.7	protein_coding	64093645,64088687,64081102,64075492,64072559	64094018,64088851,64081151,64075537,64073028	Gene ID= ENSG00000166797.10 TPM= 60.71 Transcript Type= protein_coding
chr15	64072578	64093808	64072578	64093808	-	ENST00000380290.7@FAM96A	ENST00000380290.7	protein_coding	64093645,64088687,64075492,64072578	64093808,64088851,64075537,64073028	Gene ID= ENSG00000166797.10 TPM= 4.67 Transcript Type= protein_coding
chr15	64095941	64138006	64095941	64138006	+	transcript2327.chr15.nic@SNX1	transcript2327.chr15.nic	protein_coding	64095941,64112573,64118117,64118788,64123503,64126079,64127174,64127731,64129916,64130228,64134664,64136330,64136861,64137568	64096172,64112684,64118244,64118854,64123546,64126220,64127252,64127806,64130029,64131892,64134807,64136410,64136932,64138006	Gene ID= ENSG00000028528.14 TPM= 11.87 Transcript Type= NA
chr15	64096000	64138006	64096000	64138006	+	ENST00000559844.5@SNX1	ENST00000559844.5	protein_coding	64096000,64112573,64118117,64118788,64123503,64126079,64127174,64127731,64129916,64130228,64131687,64134664,64136330,64136861,64137568	64096172,64112684,64118244,64118854,64123546,64126220,64127252,64127806,64130029,64130321,64131892,64134807,64136410,64136932,64138006	Gene ID= ENSG00000028528.14 TPM= 228.46 Transcript Type= protein_coding
chr15	64095993	64139875	64095993	64139875	+	ENST00000261889.9@SNX1	ENST00000261889.9	protein_coding	64095993,64112573,64118117,64118788,64123503,64126079,64127174,64127731,64129916,64130228,64131687,64134664,64136330,64136861,64138042	64096172,64112684,64118244,64118854,64123546,64126220,64127252,64127806,64130029,64130321,64131892,64134807,64136410,64136932,64139875	Gene ID= ENSG00000028528.14 TPM= 4.67 Transcript Type= protein_coding
chr15	64096006	64098706	64096006	64098706	+	transcript2333.chr15.nnic@NA	transcript2333.chr15.nnic	NA	64096006	64098706	Gene ID= novel_gene_chr15_2334 TPM= 5.84 Transcript Type= NA
chr15	64151717	64157481	64151717	64157481	+	ENST00000325881.8@SNX22	ENST00000325881.8	protein_coding	64151717,64152243,64152638,64153245,64153652,64153935,64154387	64151850,64152326,64152742,64153339,64153684,64154002,64157481	Gene ID= ENSG00000157734.13 TPM= 8.17 Transcript Type= protein_coding
chr15	64155812	64163205	64155812	64163205	-	ENST00000300026.3@PPIB	ENST00000300026.3	protein_coding	64162852,64162041,64160104,64156725,64155812	64163205,64162154,64160197,64156909,64156145	Gene ID= ENSG00000166794.4 TPM= 518.41 Transcript Type= protein_coding
chr15	64165517	64356259	64165517	64356259	-	ENST00000303052.12@CSNK1G1	ENST00000303052.12	protein_coding	64355988,64300319,64259201,64251512,64216562,64213890,64207509,64204865,64204441,64203082,64180348,64165517	64356259,64300723,64259241,64251581,64216713,64214124,64207594,64204949,64204589,64203189,64180454,64171985	Gene ID= ENSG00000169118.17 TPM= 4.67 Transcript Type= protein_coding
chr15	64364311	64381510	64364311	64381510	-	ENST00000300035.8@PCLAF	ENST00000300035.8	protein_coding	64381326,64380958,64376743,64364311	64381510,64381038,64376905,64366075	Gene ID= ENSG00000166803.11 TPM= 1.17 Transcript Type= protein_coding
chr15	64387804	64455303	64387804	64455303	+	ENST00000261884.7@TRIP4	ENST00000261884.7	protein_coding	64387804,64393946,64395398,64397606,64400743,64406330,64409613,64414085,64418541,64424031,64425540,64445006,64454997	64387964,64394115,64395531,64397818,64400821,64406459,64409828,64414211,64418728,64424155,64425631,64445108,64455303	Gene ID= ENSG00000103671.9 TPM= 35.03 Transcript Type= protein_coding
chr15	64387827	64455303	64387827	64455303	+	transcript2363.chr15.nnic@TRIP4	transcript2363.chr15.nnic	protein_coding	64387827,64393946,64395398,64397606,64400743,64406330,64409613,64414085,64418541,64424031,64425540,64445006,64454997	64388048,64394115,64395531,64397818,64400821,64406459,64409828,64414211,64418728,64424155,64425631,64445108,64455303	Gene ID= ENSG00000103671.9 TPM= 3.5 Transcript Type= NA
chr15	64441757	64444284	64441757	64444284	-	transcript2366.chr15.nnic@NA	transcript2366.chr15.nnic	NA	64441757	64444284	Gene ID= novel_gene_chr15_2367 TPM= 2.34 Transcript Type= NA
chr15	64673914	64675038	64673914	64675038	+	transcript2369.chr15.nnic@NA	transcript2369.chr15.nnic	NA	64673914	64675038	Gene ID= novel_gene_chr15_2370 TPM= 3.5 Transcript Type= NA
chr15	64687573	64703281	64687573	64703281	-	ENST00000326005.10@OAZ2	ENST00000326005.10	protein_coding	64703029,64691516,64691434,64690374,64689084,64687573	64703281,64691591,64691514,64690549,64689169,64688834	Gene ID= ENSG00000180304.14 TPM= 218.34 Transcript Type= protein_coding
chr15	64739890	64775860	64739890	64775860	-	transcript2384.chr15.nic@RBPMS2	transcript2384.chr15.nic	protein_coding	64775233,64751561,64750343,64749431,64749000,64748419,64739890	64775860,64751638,64750381,64749493,64749150,64748567,64741242	Gene ID= ENSG00000166831.8 TPM= 4.09 Transcript Type= NA
chr15	64739898	64775587	64739898	64775587	-	ENST00000300069.4@RBPMS2	ENST00000300069.4	protein_coding	64775233,64751561,64750343,64749431,64749000,64748419,64741173,64739898	64775587,64751638,64750381,64749493,64749150,64748567,64741242,64741000	Gene ID= ENSG00000166831.8 TPM= 6.42 Transcript Type= protein_coding
chr15	64841889	64868007	64841889	64868007	+	ENST00000323544.4@PLEKHO2	ENST00000323544.4	protein_coding	64841889,64848593,64854921,64859894,64861477,64864899	64842028,64848742,64855037,64859998,64861575,64868007	Gene ID= ENSG00000241839.9 TPM= 148.28 Transcript Type= protein_coding
chr15	64911880	64958697	64911880	64958697	+	transcript2388.chr15.nnic@ANKDD1A	transcript2388.chr15.nnic	protein_coding	64911880,64921921,64926066,64926901,64930822,64931487,64934136,64942467,64943484,64944652,64947404,64949841,64950954,64957085	64911964,64922019,64926170,64926999,64930920,64931585,64934234,64942565,64943582,64944747,64947593,64949972,64951233,64958697	Gene ID= ENSG00000166839.16 TPM= 2.34 Transcript Type= NA
chr15	64963021	64989936	64963021	64989936	-	ENST00000204566.6@SPG21	ENST00000204566.6	protein_coding	64989665,64983507,64980864,64976475,64974602,64970114,64969255,64965320,64963021	64989936,64983593,64981025,64976555,64974747,64970222,64969362,64965460,64963736	Gene ID= ENSG00000090487.10 TPM= 167.86 Transcript Type= protein_coding
chr15	64963027	64989913	64963027	64989913	-	transcript2408.chr15.nic@SPG21	transcript2408.chr15.nic	protein_coding	64989665,64980864,64976475,64974602,64970114,64969255,64965320,64963027	64989913,64981025,64976555,64974747,64970222,64969362,64965460,64963736	Gene ID= ENSG00000090487.10 TPM= 10.71 Transcript Type= NA
chr15	64963027	64989474	64963027	64989474	-	ENST00000433215.6@SPG21	ENST00000433215.6	protein_coding	64989406,64983507,64980864,64976475,64974602,64970114,64969255,64965320,64963027	64989474,64983593,64981025,64976555,64974747,64970222,64969362,64965460,64963736	Gene ID= ENSG00000090487.10 TPM= 5.57 Transcript Type= protein_coding
chr15	65045370	65053396	65045370	65053396	+	ENST00000334287.2@SLC51B	ENST00000334287.2	protein_coding	65045370,65049897,65051515,65052966	65045582,65050101,65051605,65053396	Gene ID= ENSG00000186198.3 TPM= 2.34 Transcript Type= protein_coding
chr15	65053337	65068112	65053337	65068112	-	ENST00000220062.8@RASL12	ENST00000220062.8	protein_coding	65067733,65065217,65059345,65058427,65053337	65068112,65065273,65059418,65058617,65055274	Gene ID= ENSG00000103710.10 TPM= 129.6 Transcript Type= protein_coding
chr15	65117379	65133836	65117379	65133836	-	ENST00000204549.8@PDCD7	ENST00000204549.8	protein_coding	65132912,65129032,65119718,65119376,65117379	65133836,65129170,65119954,65119463,65118840	Gene ID= ENSG00000090470.14 TPM= 31.53 Transcript Type= protein_coding
chr15	65148219	65185342	65148219	65185342	-	ENST00000300107.7@CLPX	ENST00000300107.7	protein_coding	65185075,65180044,65178934,65166631,65164029,65162604,65158575,65157746,65156844,65155692,65154782,65153547,65152430,65148219	65185342,65180204,65179051,65166785,65164188,65162645,65158751,65157910,65156932,65155856,65155081,65153639,65152536,65150913	Gene ID= ENSG00000166855.9 TPM= 4.67 Transcript Type= protein_coding
chr15	65194758	65211488	65194758	65211488	-	ENST00000261883.5@CILP	ENST00000261883.5	protein_coding	65211428,65209695,65207672,65206782,65205287,65204268,65203362,65201872,65194758	65211488,65209861,65207764,65207051,65205466,65204582,65203470,65202029,65199099	Gene ID= ENSG00000138615.5 TPM= 1.17 Transcript Type= protein_coding
chr15	65258096	65286925	65258096	65286925	-	transcript2458.chr15.nnic@PARP16	transcript2458.chr15.nnic	protein_coding	65286253,65270992,65266562,65263149,65260885,65258096	65286925,65271072,65266768,65263320,65261026,65259542	Gene ID= ENSG00000138617.14 TPM= 3.5 Transcript Type= NA
chr15	65258096	65286873	65258096	65286873	-	transcript2459.chr15.nnic@PARP16	transcript2459.chr15.nnic	protein_coding	65286253,65266562,65263149,65260885,65258096	65286873,65266768,65263320,65261026,65259542	Gene ID= ENSG00000138617.14 TPM= 5.84 Transcript Type= NA
chr15	65258094	65286872	65258094	65286872	-	ENST00000261888.10@PARP16	ENST00000261888.10	protein_coding	65286253,65270935,65266562,65263149,65260885,65258094	65286872,65271072,65266768,65263320,65261026,65259545	Gene ID= ENSG00000138617.14 TPM= 8.17 Transcript Type= protein_coding
chr15	65446621	65517704	65446621	65517704	-	ENST00000321147.10@DPP8	ENST00000321147.10	protein_coding	65517486,65515656,65512295,65507243,65500606,65497864,65490189,65487690,65485099,65481515,65480222,65478880,65474209,65467071,65466678,65463761,65456225,65451960,65450999,65446621	65517704,65515791,65512564,65507355,65500779,65498032,65490299,65487818,65485160,65481615,65480399,65479039,65474288,65467223,65466813,65463906,65456371,65452102,65451110,65447006	Gene ID= ENSG00000074603.18 TPM= 2.34 Transcript Type= protein_coding
chr15	65446617	65517709	65446617	65517709	-	transcript2470.chr15.nnic@DPP8	transcript2470.chr15.nnic	protein_coding	65517486,65512295,65507243,65500606,65497864,65490189,65487690,65485099,65481515,65480222,65478880,65474209,65467071,65466678,65463761,65456225,65454263,65451960,65446617	65517709,65512564,65507355,65500779,65498032,65490299,65487818,65485160,65481615,65480399,65479039,65474288,65467223,65466813,65463906,65456371,65454415,65452102,65447006	Gene ID= ENSG00000074603.18 TPM= 2.34 Transcript Type= NA
chr15	65446619	65517699	65446619	65517699	-	ENST00000300141.10@DPP8	ENST00000300141.10	protein_coding	65517486,65512295,65507243,65500606,65497864,65490189,65487690,65485099,65481515,65480222,65478880,65474209,65467071,65466678,65463761,65456225,65454263,65451960,65450999,65446619	65517699,65512564,65507355,65500779,65498032,65490299,65487818,65485160,65481615,65480399,65479039,65474288,65467223,65466813,65463906,65456371,65454415,65452102,65451110,65447006	Gene ID= ENSG00000074603.18 TPM= 16.35 Transcript Type= protein_coding
chr15	65530466	65578352	65530466	65578352	+	ENST00000261875.9@HACD3	ENST00000261875.9	protein_coding	65530466,65551676,65554887,65556739,65558680,65562774,65564215,65570091,65571548,65572235,65576303	65530718,65551718,65554960,65556903,65558731,65562884,65564342,65570203,65571654,65572366,65578352	Gene ID= ENSG00000074696.12 TPM= 265.04 Transcript Type= protein_coding
chr15	65578782	65611131	65578782	65611131	-	transcript2491.chr15.nic@INTS14	transcript2491.chr15.nic	protein_coding	65610686,65607159,65605129,65599774,65598872,65598321,65595733,65593428,65591598,65584770,65581954,65578782	65611131,65607442,65605236,65599929,65598990,65598463,65595825,65593572,65591731,65584888,65582019,65579659	Gene ID= ENSG00000138614.14 TPM= 7.68 Transcript Type= NA
chr15	65578753	65611136	65578753	65611136	-	ENST00000573314.5@INTS14	ENST00000573314.5	protein_coding	65610796,65607159,65605129,65599774,65598872,65598321,65595733,65593428,65591598,65584770,65581954,65578753	65611136,65607442,65605236,65599929,65598990,65598463,65595825,65593572,65591731,65584888,65582019,65579659	Gene ID= ENSG00000138614.14 TPM= 15.86 Transcript Type= nonsense_mediated_decay
chr15	65578782	65611245	65578782	65611245	-	ENST00000313182.6@INTS14	ENST00000313182.6	protein_coding	65611098,65607159,65605129,65599774,65598872,65598321,65595733,65593428,65591598,65584770,65581954,65578782	65611245,65607442,65605236,65599929,65598990,65598463,65595825,65593572,65591731,65584888,65582019,65579659	Gene ID= ENSG00000138614.14 TPM= 34.54 Transcript Type= protein_coding
chr15	65578782	65611126	65578782	65611126	-	transcript2497.chr15.nic@INTS14	transcript2497.chr15.nic	protein_coding	65610796,65605129,65599774,65598872,65598321,65595733,65593428,65591598,65584770,65581954,65578782	65611126,65605236,65599929,65598990,65598463,65595825,65593572,65591731,65584888,65582019,65579659	Gene ID= ENSG00000138614.14 TPM= 2.63 Transcript Type= NA
chr15	65869458	65891991	65869458	65891991	+	ENST00000261890.6@RAB11A	ENST00000261890.6	protein_coding	65869458,65877332,65877762,65879671,65887701	65869625,65877527,65877955,65879751,65891991	Gene ID= ENSG00000103769.9 TPM= 25.69 Transcript Type= protein_coding
chr15	66293217	66333898	66293217	66333898	+	ENST00000319194.9@DIS3L	ENST00000319194.9	protein_coding	66293217,66294988,66306824,66308709,66311724,66314039,66315036,66318449,66320571,66322687,66323493,66325831,66328970,66329221,66331875,66332736,66333004	66293367,66295141,66306952,66308844,66311900,66314117,66315215,66318618,66320732,66322934,66323585,66326364,66329124,66329399,66332020,66332910,66333898	Gene ID= ENSG00000166938.12 TPM= 9.34 Transcript Type= protein_coding
chr15	66293805	66333898	66293805	66333898	+	transcript2525.chr15.nic@DIS3L	transcript2525.chr15.nic	protein_coding	66293805,66294988,66306824,66308709,66311724,66314039,66315036,66318449,66320571,66322687,66323493,66325831,66328970,66329221,66331875,66332736,66333004	66294174,66295141,66306952,66308844,66311900,66314117,66315215,66318618,66320732,66322934,66323585,66326364,66329124,66329399,66332020,66332910,66333898	Gene ID= ENSG00000166938.12 TPM= 7.01 Transcript Type= NA
chr15	66293820	66333744	66293820	66333744	+	transcript2527.chr15.nic@DIS3L	transcript2527.chr15.nic	protein_coding	66293820,66294988,66306824,66308709,66311724,66314039,66315036,66318449,66320571,66322687,66323493,66325831,66328970,66329221,66331875,66332736,66333004	66294448,66295141,66306952,66308844,66311900,66314117,66315215,66318618,66320732,66322934,66323585,66326364,66329124,66329399,66332020,66332910,66333744	Gene ID= ENSG00000166938.12 TPM= 2.34 Transcript Type= NA
chr15	66293560	66333898	66293560	66333898	+	transcript2530.chr15.nic@DIS3L	transcript2530.chr15.nic	protein_coding	66293560,66294988,66306824,66308709,66311724,66314039,66315036,66318449,66320571,66322687,66323493,66325831,66328970,66331875,66332736,66333004	66293735,66295141,66306952,66308844,66311900,66314117,66315215,66318618,66320732,66322934,66323585,66326364,66329399,66332020,66332910,66333898	Gene ID= ENSG00000166938.12 TPM= 2.34 Transcript Type= NA
chr15	66293487	66333898	66293487	66333898	+	transcript2533.chr15.nnic@DIS3L	transcript2533.chr15.nnic	protein_coding	66293487,66294988,66306824,66308709,66314039,66315036,66318449,66320571,66322687,66323493,66325831,66328970,66329221,66331875,66332736,66333004	66293735,66295141,66306952,66308844,66314117,66315215,66318618,66320732,66322934,66323585,66326364,66329124,66329399,66332020,66332910,66333898	Gene ID= ENSG00000166938.12 TPM= 2.92 Transcript Type= NA
chr15	66293487	66333898	66293487	66333898	+	transcript2534.chr15.nnic@DIS3L	transcript2534.chr15.nnic	protein_coding	66293487,66294988,66308709,66311724,66314039,66315036,66318449,66320571,66322687,66323493,66325831,66328970,66329221,66331875,66332736,66333004	66293735,66295141,66308844,66311900,66314117,66315215,66318618,66320732,66322934,66323585,66326364,66329124,66329399,66332020,66332910,66333898	Gene ID= ENSG00000166938.12 TPM= 2.92 Transcript Type= NA
chr15	66293547	66333744	66293547	66333744	+	ENST00000319212.8@DIS3L	ENST00000319212.8	protein_coding	66293547,66294988,66306824,66308709,66311724,66314039,66315036,66318449,66320571,66322687,66323493,66325831,66328970,66329221,66331875,66332736,66333004	66293735,66295141,66306952,66308844,66311900,66314117,66315215,66318618,66320732,66322934,66323585,66326364,66329124,66329399,66332020,66332910,66333744	Gene ID= ENSG00000166938.12 TPM= 15.18 Transcript Type= protein_coding
chr15	66336384	66356685	66336384	66356685	-	ENST00000566524.5@TIPIN	ENST00000566524.5	protein_coding	66356639,66352815,66352129,66349315,66349060,66341150,66336384	66356685,66352955,66352207,66349437,66349123,66341356,66337181	Gene ID= ENSG00000075131.9 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr15	66378472	66386736	66378472	66386736	-	transcript2542.chr15.nnic@TIPIN	transcript2542.chr15.nnic	protein_coding	66386607,66378472	66386736,66379940	Gene ID= ENSG00000075131.9 TPM= 2.34 Transcript Type= NA
chr15	66386817	66492312	66386817	66492312	+	ENST00000307102.9@MAP2K1	ENST00000307102.9	protein_coding	66386817,66435027,66436746,66443280,66444656,66481755,66484990,66487228,66489215,66489718,66490502	66387427,66435237,66436892,66443357,66444707,66481879,66485191,66487292,66489276,66489763,66492312	Gene ID= ENSG00000169032.9 TPM= 57.21 Transcript Type= protein_coding
chr15	66386935	66491532	66386935	66491532	+	transcript2547.chr15.nnic@MAP2K1	transcript2547.chr15.nnic	protein_coding	66386935,66435027,66436746,66443280,66444656,66481755,66484990,66489215,66489718,66490502	66387427,66435237,66436892,66443357,66444707,66481879,66485191,66489276,66489763,66491532	Gene ID= ENSG00000169032.9 TPM= 2.34 Transcript Type= NA
chr15	66386837	66491532	66386837	66491532	+	transcript2548.chr15.nnic@MAP2K1	transcript2548.chr15.nnic	protein_coding	66386837,66435027,66436746,66444656,66481755,66484990,66487228,66489215,66489718,66490502	66387427,66435237,66436892,66444707,66481879,66485191,66487292,66489276,66489763,66491532	Gene ID= ENSG00000169032.9 TPM= 5.84 Transcript Type= NA
chr15	66493813	66497813	66493813	66497813	-	ENST00000316634.5@SNAPC5	ENST00000316634.5	protein_coding	66497642,66495330,66493813	66497813,66495419,66494552	Gene ID= ENSG00000174446.12 TPM= 16.35 Transcript Type= protein_coding
chr15	66498015	66504883	66498015	66504883	-	ENST00000307961.10@RPL4	ENST00000307961.10	protein_coding	66504788,66503358,66503058,66502612,66501788,66501375,66500949,66500293,66500056,66498015	66504883,66503529,66503164,66502750,66501912,66501504,66501105,66500376,66500176,66499652	Gene ID= ENSG00000174444.14 TPM= 5.25 Transcript Type= protein_coding
chr15	66504959	66550128	66504959	66550128	+	ENST00000307897.9@ZWILCH	ENST00000307897.9	protein_coding	66504959,66508841,66513988,66515526,66518879,66520590,66521050,66523677,66527290,66527857,66528852,66529494,66532247,66532985,66535933,66537168,66540098,66546591,66548351	66505391,66508892,66514083,66515644,66519078,66520660,66521205,66523748,66527383,66527912,66528957,66529573,66532403,66533013,66536069,66537263,66540210,66546705,66550128	Gene ID= ENSG00000174442.11 TPM= 3.5 Transcript Type= protein_coding
chr15	66655356	66657659	66655356	66657659	-	transcript2627.chr15.nnic@NA	transcript2627.chr15.nnic	NA	66655356	66657659	Gene ID= novel_gene_chr15_2628 TPM= 39.7 Transcript Type= NA
chr15	66701669	66781988	66701669	66781988	+	transcript2596.chr15.nnic@SMAD6	transcript2596.chr15.nnic	protein_coding	66701669,66711668,66716421,66780997	66708738,66711724,66716498,66781988	Gene ID= ENSG00000137834.14 TPM= 23.35 Transcript Type= NA
chr15	66702028	66781988	66702028	66781988	+	transcript2602.chr15.nnic@SMAD6	transcript2602.chr15.nnic	protein_coding	66702028,66711668,66716421,66780997	66702677,66711724,66716498,66781988	Gene ID= ENSG00000137834.14 TPM= 11.68 Transcript Type= NA
chr15	66703077	66708274	66703077	66708274	+	ENST00000612349.1@SMAD6	ENST00000612349.1	protein_coding	66703077	66708274	Gene ID= ENSG00000137834.14 TPM= 8.17 Transcript Type= processed_transcript
chr15	66702228	66782848	66702228	66782848	+	ENST00000288840.9@SMAD6	ENST00000288840.9	protein_coding	66702228,66711668,66716421,66780997	66704075,66711724,66716498,66782848	Gene ID= ENSG00000137834.14 TPM= 44.46 Transcript Type= protein_coding
chr15	66734619	66737719	66734619	66737719	+	transcript2625.chr15.nnic@NA	transcript2625.chr15.nnic	NA	66734619	66737719	Gene ID= novel_gene_chr15_2626 TPM= 4.67 Transcript Type= NA
chr15	66767961	66773126	66767961	66773126	-	transcript2629.chr15.nnic@NA	transcript2629.chr15.nnic	NA	66767961	66773126	Gene ID= novel_gene_chr15_2630 TPM= 40.87 Transcript Type= NA
chr15	66783149	66785448	66783149	66785448	-	transcript2631.chr15.nnic@NA	transcript2631.chr15.nnic	NA	66783149	66785448	Gene ID= novel_gene_chr15_2632 TPM= 2.34 Transcript Type= NA
chr15	66846386	66849504	66846386	66849504	-	transcript2635.chr15.nnic@NA	transcript2635.chr15.nnic	NA	66846386	66849504	Gene ID= novel_gene_chr15_2636 TPM= 12.84 Transcript Type= NA
chr15	66854334	66855917	66854334	66855917	+	transcript2633.chr15.nnic@NA	transcript2633.chr15.nnic	NA	66854334	66855917	Gene ID= novel_gene_chr15_2634 TPM= 2.34 Transcript Type= NA
chr15	66856809	66858886	66856809	66858886	-	transcript2637.chr15.nnic@NA	transcript2637.chr15.nnic	NA	66856809	66858886	Gene ID= novel_gene_chr15_2638 TPM= 2.34 Transcript Type= NA
chr15	67065845	67195195	67065845	67195195	+	ENST00000327367.8@SMAD3	ENST00000327367.8	protein_coding	67065845,67164895,67165253,67166779,67170554,67181241,67184727,67187365,67190413	67066360,67165088,67165384,67166853,67170604,67181453,67184864,67187509,67195195	Gene ID= ENSG00000166949.15 TPM= 17.51 Transcript Type= protein_coding
chr15	67177424	67181681	67177424	67181681	-	transcript2643.chr15.nnic@NA	transcript2643.chr15.nnic	NA	67177424	67181681	Gene ID= novel_gene_chr15_2644 TPM= 8.17 Transcript Type= NA
chr15	67201033	67254736	67201033	67254736	-	ENST00000261880.9@AAGAB	ENST00000261880.9	protein_coding	67254559,67236630,67236408,67235979,67231814,67209462,67208562,67204044,67203548,67201033	67254736,67236820,67236504,67236068,67231897,67209544,67208658,67204148,67203597,67202898	Gene ID= ENSG00000103591.12 TPM= 3.5 Transcript Type= protein_coding
chr15	67201673	67254640	67201673	67254640	-	transcript2649.chr15.nnic@AAGAB	transcript2649.chr15.nnic	protein_coding	67254224,67236630,67236408,67235979,67231814,67209462,67208562,67204044,67203548,67201673	67254640,67236820,67236504,67236068,67231897,67209544,67208658,67204148,67203597,67202898	Gene ID= ENSG00000103591.12 TPM= 2.34 Transcript Type= NA
chr15	67201707	67254675	67201707	67254675	-	ENST00000561452.5@AAGAB	ENST00000561452.5	protein_coding	67254414,67236630,67236408,67235979,67231814,67209462,67208562,67204044,67203548,67201707	67254675,67236820,67236504,67236068,67231897,67209544,67208658,67204148,67203597,67202898	Gene ID= ENSG00000103591.12 TPM= 7.01 Transcript Type= protein_coding
chr15	67521068	67530143	67521068	67530143	+	ENST00000342683.5@C15orf61	ENST00000342683.5	protein_coding	67521068,67526418	67521594,67530143	Gene ID= ENSG00000189227.5 TPM= 1.17 Transcript Type= protein_coding
chr15	67521146	67523448	67521146	67523448	+	transcript2665.chr15.nnic@NA	transcript2665.chr15.nnic	NA	67521146	67523448	Gene ID= novel_gene_chr15_2666 TPM= 2.34 Transcript Type= NA
chr15	67542709	67807123	67542709	67807123	+	ENST00000178640.9@MAP2K5	ENST00000178640.9	protein_coding	67542709,67550034,67563283,67580754,67585890,67586846,67592926,67600685,67630888,67646231,67646388,67658553,67664597,67692479,67693518,67703337,67727916,67748231,67748569,67769602,67772707,67806646	67543470,67550082,67563350,67580823,67585930,67586913,67592974,67600749,67630927,67646299,67646469,67658614,67664645,67692552,67693568,67703408,67727945,67748257,67748601,67769663,67772752,67807123	Gene ID= ENSG00000137764.19 TPM= 16.35 Transcript Type= protein_coding
chr15	68054179	68193846	68054179	68193846	+	ENST00000249636.10@PIAS1	ENST00000249636.10	protein_coding	68054179,68086306,68141946,68142290,68145816,68146566,68153590,68164731,68173732,68175637,68176474,68181212,68183630,68187542	68054350,68086750,68142030,68142337,68145906,68146700,68153695,68164804,68173892,68175767,68176654,68181354,68183667,68193846	Gene ID= ENSG00000033800.13 TPM= 19.85 Transcript Type= protein_coding
chr15	68054291	68155472	68054291	68155472	+	transcript2679.chr15.nic@PIAS1	transcript2679.chr15.nic	protein_coding	68054291,68086306,68141946,68142290,68145816,68146566,68153590	68054350,68086750,68142030,68142337,68145906,68146700,68155472	Gene ID= ENSG00000033800.13 TPM= 2.34 Transcript Type= NA
chr15	68054291	68087607	68054291	68087607	+	transcript2687.chr15.nic@PIAS1	transcript2687.chr15.nic	protein_coding	68054291,68086306	68054350,68087607	Gene ID= ENSG00000033800.13 TPM= 2.34 Transcript Type= NA
chr15	68193803	68206049	68193803	68206049	-	ENST00000395463.2@CALML4	ENST00000395463.2	protein_coding	68205245,68199541,68197440,68193803	68206049,68199681,68197628,68194112	Gene ID= ENSG00000129007.14 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr15	68206992	68229743	68206992	68229743	-	ENST00000249806.10@CLN6	ENST00000249806.10	protein_coding	68229502,68218536,68214290,68211675,68211263,68209637,68206992	68229743,68218650,68214388,68211863,68211318,68209759,68208410	Gene ID= ENSG00000128973.12 TPM= 66.55 Transcript Type= protein_coding
chr15	68277803	68295865	68277803	68295865	+	ENST00000306917.4@FEM1B	ENST00000306917.4	protein_coding	68277803,68289607	68278665,68295865	Gene ID= ENSG00000169018.5 TPM= 15.18 Transcript Type= protein_coding
chr15	68286219	68287987	68286219	68287987	-	transcript2708.chr15.nnic@NA	transcript2708.chr15.nnic	NA	68286219	68287987	Gene ID= novel_gene_chr15_2709 TPM= 2.34 Transcript Type= NA
chr15	68778535	68820895	68778535	68820895	-	ENST00000465139.6@ANP32A	ENST00000465139.6	protein_coding	68820698,68787770,68787413,68784397,68782956,68780410,68778535	68820895,68787919,68787535,68784595,68783053,68780473,68780142	Gene ID= ENSG00000140350.15 TPM= 29.19 Transcript Type= protein_coding
chr15	68799274	68800755	68799274	68800755	+	transcript2720.chr15.nnic@NA	transcript2720.chr15.nnic	NA	68799274	68800755	Gene ID= novel_gene_chr15_2721 TPM= 2.34 Transcript Type= NA
chr15	68818218	68818427	68818218	68818427	+	transcript2722.chr15.nnic@NA	transcript2722.chr15.nnic	NA	68818218	68818427	Gene ID= novel_gene_chr15_2723 TPM= 2.34 Transcript Type= NA
chr15	68825555	68827059	68825555	68827059	+	transcript2724.chr15.nnic@NA	transcript2724.chr15.nnic	NA	68825555	68827059	Gene ID= novel_gene_chr15_2725 TPM= 2.34 Transcript Type= NA
chr15	68930500	68946811	68930500	68946811	+	ENST00000310673.3@SPESP1	ENST00000310673.3	protein_coding	68930500,68945599	68930717,68946811	Gene ID= ENSG00000258484.3 TPM= 1.17 Transcript Type= protein_coding
chr15	69160616	69263980	69160616	69263980	+	transcript2731.chr15.nic@GLCE	transcript2731.chr15.nic	protein_coding	69160616,69210316,69255794,69261087	69160757,69210406,69256392,69263980	Gene ID= ENSG00000138604.9 TPM= 2.34 Transcript Type= NA
chr15	69160634	69272199	69160634	69272199	+	ENST00000261858.6@GLCE	ENST00000261858.6	protein_coding	69160634,69210316,69255794,69261087,69268220	69160757,69210406,69256392,69261329,69272199	Gene ID= ENSG00000138604.9 TPM= 30.36 Transcript Type= protein_coding
chr15	69160584	69197458	69160584	69197458	+	ENST00000559798.2@GLCE	ENST00000559798.2	protein_coding	69160584,69194436,69196415	69160757,69194525,69197458	Gene ID= ENSG00000138604.9 TPM= 2.34 Transcript Type= processed_transcript
chr15	69292325	69296267	69292325	69296267	-	transcript2743.chr15.nnic@NA	transcript2743.chr15.nnic	NA	69292325	69296267	Gene ID= novel_gene_chr15_2744 TPM= 2.34 Transcript Type= NA
chr15	69358635	69360097	69358635	69360097	-	transcript2757.chr15.nnic@NA	transcript2757.chr15.nnic	NA	69358635	69360097	Gene ID= novel_gene_chr15_2758 TPM= 2.34 Transcript Type= NA
chr15	69390362	69392507	69390362	69392507	-	transcript2759.chr15.nnic@NA	transcript2759.chr15.nnic	NA	69390362	69392507	Gene ID= novel_gene_chr15_2760 TPM= 2.34 Transcript Type= NA
chr15	69396904	69415029	69396904	69415029	-	ENST00000558617.1@AC027237.3	ENST00000558617.1	antisense_RNA	69414152,69400973,69396904	69415029,69401027,69397748	Gene ID= ENSG00000259426.5 TPM= 2.34 Transcript Type= antisense_RNA
chr15	69452818	69455546	69452818	69455546	+	transcript2763.chr15.nnic@RPLP1	transcript2763.chr15.nnic	protein_coding	69452818,69452885,69453647,69455170,69455428	69452829,69453020,69453721,69455287,69455546	Gene ID= ENSG00000137818.11 TPM= 50.21 Transcript Type= NA
chr15	69452784	69456194	69452784	69456194	+	ENST00000260379.10@RPLP1	ENST00000260379.10	protein_coding	69452784,69453647,69455170,69455428	69453020,69453721,69455287,69456194	Gene ID= ENSG00000137818.11 TPM= 7.59 Transcript Type= protein_coding
chr15	69452814	69455547	69452814	69455547	+	ENST00000357790.5@RPLP1	ENST00000357790.5	protein_coding	69452814,69455170,69455428	69453020,69455287,69455547	Gene ID= ENSG00000137818.11 TPM= 23.94 Transcript Type= protein_coding
chr15	69452819	69455546	69452819	69455546	+	ENST00000487304.6@RPLP1	ENST00000487304.6	protein_coding	69452819,69453647,69455428	69453020,69455287,69455546	Gene ID= ENSG00000137818.11 TPM= 3.5 Transcript Type= retained_intron
chr15	70047790	70098176	70047790	70098176	-	ENST00000558939.5@TLE3	ENST00000558939.5	protein_coding	70096775,70096161,70095578,70094532,70076096,70074533,70066014,70064454,70060530,70059410,70058663,70058150,70057459,70056298,70055049,70054438,70053227,70052374,70051391,70047790	70098176,70096261,70095641,70094576,70076158,70074607,70066218,70064470,70060649,70059460,70058815,70058291,70057658,70056374,70055298,70054685,70053374,70052524,70051467,70050204	Gene ID= ENSG00000140332.15 TPM= 43.78 Transcript Type= protein_coding
chr15	70654554	70763593	70654554	70763593	-	ENST00000322954.10@UACA	ENST00000322954.10	protein_coding	70763330,70699527,70695017,70691299,70690454,70687750,70687540,70684265,70682758,70679608,70678099,70677108,70676493,70671965,70671039,70666724,70664662,70660151,70654554	70763593,70699660,70695105,70691363,70690511,70687820,70687646,70684446,70682795,70679676,70678206,70677140,70676591,70672001,70671091,70669462,70664814,70660216,70657127	Gene ID= ENSG00000137831.14 TPM= 3.5 Transcript Type= protein_coding
chr15	70656802	70702308	70656802	70702308	-	ENST00000379983.6@UACA	ENST00000379983.6	protein_coding	70701877,70699527,70695017,70691299,70690454,70687750,70687540,70684265,70682758,70679608,70678099,70677108,70676493,70671965,70671039,70666724,70664662,70660151,70656802	70702308,70699660,70695105,70691363,70690511,70687820,70687646,70684446,70682795,70679676,70678206,70677140,70676591,70672001,70671091,70669462,70664814,70660216,70657127	Gene ID= ENSG00000137831.14 TPM= 2.34 Transcript Type= protein_coding
chr15	70656932	70763424	70656932	70763424	-	transcript2796.chr15.nic@UACA	transcript2796.chr15.nic	protein_coding	70763330,70699527,70695017,70691299,70690454,70687750,70687540,70684265,70682758,70679608,70678099,70676493,70671965,70671039,70666724,70664662,70660151,70656932	70763424,70699660,70695105,70691363,70690511,70687820,70687646,70684446,70682795,70679676,70678206,70676591,70672001,70671091,70669462,70664814,70660216,70657127	Gene ID= ENSG00000137831.14 TPM= 2.34 Transcript Type= NA
chr15	70656932	70702308	70656932	70702308	-	ENST00000560441.5@UACA	ENST00000560441.5	protein_coding	70701877,70699527,70695017,70691299,70690454,70687750,70687540,70684265,70682758,70679608,70678099,70677108,70676493,70671971,70671039,70666724,70664662,70660151,70656932	70702308,70699660,70695105,70691363,70690511,70687820,70687646,70684446,70682795,70679676,70678206,70677140,70676591,70672001,70671091,70669462,70664814,70660216,70657127	Gene ID= ENSG00000137831.14 TPM= 2.34 Transcript Type= protein_coding
chr15	70881342	70892785	70881342	70892785	-	ENST00000249861.8@THAP10	ENST00000249861.8	protein_coding	70891844,70882761,70881342	70892785,70882908,70882650	Gene ID= ENSG00000129028.8 TPM= 5.84 Transcript Type= protein_coding
chr15	70892635	71050075	70892635	71050075	+	ENST00000260382.9@LRRC49	ENST00000260382.9	protein_coding	70892635,70893584,70895849,70900922,70904552,70911532,70919050,70936761,70963785,70980101,70984094,71008379,71009807,71012804,71037179,71049409	70892942,70893640,70895936,70901024,70904755,70911598,70919193,70936822,70963932,70980184,70984257,71008616,71009992,71012913,71037332,71050075	Gene ID= ENSG00000137821.11 TPM= 1.17 Transcript Type= protein_coding
chr15	71332894	71339125	71332894	71339125	-	transcript2807.chr15.nnic@NA	transcript2807.chr15.nnic	NA	71332894	71339125	Gene ID= novel_gene_chr15_2808 TPM= 4.67 Transcript Type= NA
chr15	71345800	71347306	71345800	71347306	-	transcript2809.chr15.nnic@NA	transcript2809.chr15.nnic	NA	71345800	71347306	Gene ID= novel_gene_chr15_2810 TPM= 2.34 Transcript Type= NA
chr15	71441399	71446144	71441399	71446144	-	transcript2811.chr15.nnic@NA	transcript2811.chr15.nnic	NA	71441399	71446144	Gene ID= novel_gene_chr15_2812 TPM= 2.34 Transcript Type= NA
chr15	71096952	71783383	71096952	71783383	+	ENST00000355327.7@THSD4	ENST00000355327.7	protein_coding	71096952,71141449,71154863,71215035,71242649,71256613,71411687,71660530,71728549,71731121,71737732,71745106,71746838,71748421,71757902,71765020,71771064,71777232	71097006,71141556,71154932,71215399,71243096,71256715,71411823,71660734,71728724,71731217,71738007,71745235,71747042,71748594,71758075,71765199,71771208,71783383	Gene ID= ENSG00000187720.14 TPM= 5.84 Transcript Type= protein_coding
chr15	71934787	72118181	71934787	72118181	-	transcript2821.chr15.nic@MYO9A	transcript2821.chr15.nic	protein_coding	72117680,72045724,72032494,72027731,72020918,72019039,72010350,72007826,71999851,71994469,71991103,71978171,71967984,71959901,71938852,71934787	72118181,72046634,72032588,72027793,72021017,72019095,72010447,72007952,71999940,71994585,71991237,71978292,71968125,71960096,71938927,71935484	Gene ID= ENSG00000066933.15 TPM= 2.34 Transcript Type= NA
chr15	72017011	72118195	72017011	72118195	-	transcript2827.chr15.nic@MYO9A	transcript2827.chr15.nic	protein_coding	72118157,72045724,72032494,72027731,72020918,72017011	72118195,72046634,72032588,72027793,72021017,72019095	Gene ID= ENSG00000066933.15 TPM= 2.34 Transcript Type= NA
chr15	72017011	72118181	72017011	72118181	-	transcript2829.chr15.nic@MYO9A	transcript2829.chr15.nic	protein_coding	72117680,72045724,72032494,72027731,72017011	72118181,72046634,72032588,72027793,72021017	Gene ID= ENSG00000066933.15 TPM= 2.34 Transcript Type= NA
chr15	71839424	71840450	71839424	71840450	-	transcript2831.chr15.nnic@NA	transcript2831.chr15.nnic	NA	71839424	71840450	Gene ID= novel_gene_chr15_2832 TPM= 2.34 Transcript Type= NA
chr15	72118296	72143688	72118296	72143688	+	ENST00000340912.5@SENP8	ENST00000340912.5	protein_coding	72118296,72139577	72118464,72143688	Gene ID= ENSG00000166192.14 TPM= 2.34 Transcript Type= protein_coding
chr15	72159808	72197850	72159808	72197850	-	transcript2842.chr15.nnic@GRAMD2A	transcript2842.chr15.nnic	protein_coding	72197731,72169847,72168939,72168491,72167736,72166994,72166632,72165354,72163613,72163266,72162273,72159808	72197850,72169939,72169121,72168566,72167839,72167092,72166703,72165410,72163757,72163476,72162377,72162012	Gene ID= ENSG00000175318.11 TPM= 3.7 Transcript Type= NA
chr15	72159808	72197794	72159808	72197794	-	transcript2844.chr15.nic@GRAMD2A	transcript2844.chr15.nic	protein_coding	72197731,72168939,72168491,72167736,72166994,72166632,72165354,72163613,72163266,72162273,72159808	72197794,72169939,72168566,72167839,72167092,72166703,72165410,72163757,72163476,72162377,72162012	Gene ID= ENSG00000175318.11 TPM= 4.87 Transcript Type= NA
chr15	72159808	72197783	72159808	72197783	-	transcript2848.chr15.nic@GRAMD2A	transcript2848.chr15.nic	protein_coding	72197731,72169847,72168939,72168491,72167736,72166994,72166632,72165354,72162273,72159808	72197783,72169939,72168996,72168566,72167839,72167092,72166703,72165410,72163757,72162012	Gene ID= ENSG00000175318.11 TPM= 4.09 Transcript Type= NA
chr15	72159807	72197785	72159807	72197785	-	ENST00000309731.11@GRAMD2A	ENST00000309731.11	protein_coding	72197731,72169847,72168939,72168491,72167736,72166994,72166632,72165354,72163613,72163266,72162273,72159807	72197785,72169939,72168996,72168566,72167839,72167092,72166703,72165410,72163757,72163476,72162377,72162012	Gene ID= ENSG00000175318.11 TPM= 70.25 Transcript Type= protein_coding
chr15	72199032	72231206	72199032	72231206	-	ENST00000335181.9@PKM	ENST00000335181.9	protein_coding	72231116,72218944,72217409,72210347,72209673,72208621,72207127,72206728,72202454,72200474,72199032	72231206,72219110,72217500,72210478,72209859,72208891,72207277,72206880,72202620,72200655,72199756	Gene ID= ENSG00000067225.17 TPM= 897.3 Transcript Type= protein_coding
chr15	72199032	72231386	72199032	72231386	-	transcript2866.chr15.nic@PKM	transcript2866.chr15.nic	protein_coding	72231116,72218944,72217409,72210347,72209673,72208621,72207127,72206728,72203022,72200474,72199032	72231386,72219110,72217500,72210478,72209859,72208891,72207277,72206880,72203188,72200655,72199756	Gene ID= ENSG00000067225.17 TPM= 60.13 Transcript Type= NA
chr15	72205625	72231233	72205625	72231233	-	transcript2873.chr15.nic@PKM	transcript2873.chr15.nic	protein_coding	72231116,72218944,72217409,72210347,72209673,72208621,72207127,72205625	72231233,72219110,72217500,72210478,72209859,72208891,72207277,72206880	Gene ID= ENSG00000067225.17 TPM= 34.44 Transcript Type= NA
chr15	72241181	72272665	72241181	72272665	-	transcript2900.chr15.nic@PARP6	transcript2900.chr15.nic	protein_coding	72272393,72271023,72267475,72266745,72265897,72265413,72265081,72264555,72261558,72260478,72259608,72258037,72257348,72256465,72254455,72253437,72251207,72250845,72250020,72242620,72242157,72241901,72241181	72272665,72271287,72267671,72266822,72265991,72265473,72265171,72264621,72261707,72260688,72259661,72258132,72257440,72256590,72254520,72253504,72251255,72250954,72250092,72242699,72242220,72241985,72241557	Gene ID= ENSG00000137817.16 TPM= 11.19 Transcript Type= NA
chr15	72241181	72272665	72241181	72272665	-	transcript2903.chr15.nic@PARP6	transcript2903.chr15.nic	protein_coding	72272393,72271023,72267475,72266745,72265897,72265413,72265081,72264555,72261558,72260538,72259608,72258037,72257348,72256465,72254455,72253437,72251207,72250845,72250020,72242620,72242157,72241901,72241181	72272665,72271287,72267671,72266822,72265991,72265473,72265171,72264621,72261707,72260688,72259661,72258132,72257440,72256590,72254520,72253504,72251255,72250954,72250092,72242699,72242220,72241985,72241557	Gene ID= ENSG00000137817.16 TPM= 9.34 Transcript Type= NA
chr15	72241181	72272665	72241181	72272665	-	transcript2914.chr15.nic@PARP6	transcript2914.chr15.nic	protein_coding	72271023,72267475,72266745,72265897,72265270,72265081,72264555,72261558,72260478,72259608,72258037,72257348,72256465,72254455,72253437,72251207,72250845,72250020,72242620,72242157,72241901,72241181	72272665,72267671,72266822,72265991,72265473,72265171,72264621,72261707,72260688,72259661,72258132,72257440,72256590,72254520,72253504,72251255,72250954,72250092,72242699,72242220,72241985,72241557	Gene ID= ENSG00000137817.16 TPM= 3.95 Transcript Type= NA
chr15	72241181	72272648	72241181	72272648	-	transcript2924.chr15.nic@PARP6	transcript2924.chr15.nic	protein_coding	72272281,72271023,72267475,72266745,72265897,72265413,72265081,72264555,72261558,72260478,72259608,72258037,72257348,72256465,72254455,72253437,72251207,72250020,72242620,72242157,72241901,72241181	72272648,72271287,72267671,72266822,72265991,72265473,72265171,72264621,72261707,72260688,72259661,72258132,72257440,72256590,72254520,72253504,72251255,72250092,72242699,72242220,72241985,72241557	Gene ID= ENSG00000137817.16 TPM= 4.67 Transcript Type= NA
chr15	72241181	72272613	72241181	72272613	-	transcript2925.chr15.nic@PARP6	transcript2925.chr15.nic	protein_coding	72272393,72271023,72267475,72266745,72265897,72265413,72265081,72264555,72261558,72260478,72259608,72258037,72257348,72256465,72254455,72253437,72251207,72250020,72242620,72242157,72241901,72241181	72272613,72271287,72267671,72266822,72265991,72265473,72265171,72264621,72261707,72260688,72259661,72258132,72257440,72256590,72254520,72253504,72251255,72250092,72242699,72242220,72241985,72241557	Gene ID= ENSG00000137817.16 TPM= 8.17 Transcript Type= NA
chr15	72241181	72272665	72241181	72272665	-	transcript2927.chr15.nic@PARP6	transcript2927.chr15.nic	protein_coding	72272393,72271023,72267475,72266745,72265897,72265413,72265081,72264555,72261558,72260538,72259608,72258037,72257348,72256465,72254455,72253437,72251207,72250020,72242620,72242157,72241901,72241181	72272665,72271287,72267671,72266822,72265991,72265473,72265171,72264621,72261707,72260688,72259661,72258132,72257440,72256590,72254520,72253504,72251255,72250092,72242699,72242220,72241985,72241557	Gene ID= ENSG00000137817.16 TPM= 7.01 Transcript Type= NA
chr15	72241181	72272665	72241181	72272665	-	transcript2929.chr15.nic@PARP6	transcript2929.chr15.nic	protein_coding	72271023,72266745,72265897,72265413,72265081,72264555,72261558,72260538,72259608,72258037,72257348,72256465,72254455,72253437,72251207,72250845,72250020,72242620,72242157,72241901,72241181	72272665,72267671,72265991,72265473,72265171,72264621,72261707,72260688,72259661,72258132,72257440,72256590,72254520,72253504,72251255,72250954,72250092,72242699,72242220,72241985,72241557	Gene ID= ENSG00000137817.16 TPM= 11.05 Transcript Type= NA
chr15	72241181	72272665	72241181	72272665	-	transcript2936.chr15.nic@PARP6	transcript2936.chr15.nic	protein_coding	72271023,72266745,72265897,72265413,72265081,72264555,72261558,72260478,72259608,72258037,72257348,72256465,72254455,72253437,72251207,72250020,72242620,72242157,72241901,72241181	72272665,72267671,72265991,72265473,72265171,72264621,72261707,72260688,72259661,72258132,72257440,72256590,72254520,72253504,72251255,72250092,72242699,72242220,72241985,72241557	Gene ID= ENSG00000137817.16 TPM= 4.81 Transcript Type= NA
chr15	72343908	72376003	72343908	72376003	-	ENST00000567411.5@HEXA	ENST00000567411.5	protein_coding	72375720,72356525,72355559,72353068,72351133,72350518,72349079,72348048,72347686,72346527,72346235,72345446,72343908	72376003,72356617,72355624,72353178,72351234,72350650,72349259,72348134,72347758,72346710,72346325,72345550,72344140	Gene ID= ENSG00000213614.9 TPM= 8.17 Transcript Type= nonsense_mediated_decay
chr15	72474302	72575576	72474302	72575576	+	transcript2985.chr15.nnic@ARIH1	transcript2985.chr15.nnic	protein_coding	72474302,72518067,72544820,72555271,72555852,72561483,72563394,72566563,72567106,72570177,72572108,72573491	72475014,72518134,72544964,72555363,72555907,72561549,72563500,72566605,72567177,72570307,72572293,72575576	Gene ID= ENSG00000166233.14 TPM= 2.34 Transcript Type= NA
chr15	72524248	72530524	72524248	72530524	-	transcript2992.chr15.nnic@NA	transcript2992.chr15.nnic	NA	72524248	72530524	Gene ID= novel_gene_chr15_2993 TPM= 3.5 Transcript Type= NA
chr15	72686187	72738476	72686187	72738476	+	ENST00000268057.8@BBS4	ENST00000268057.8	protein_coding	72686187,72695177,72709700,72712244,72715291,72716778,72722794,72724528,72727940,72729616,72731305,72731555,72735113,72735825,72736762,72737478	72686251,72695228,72709779,72712307,72715402,72716850,72722847,72724655,72727994,72729684,72731457,72731726,72735182,72735966,72736963,72738476	Gene ID= ENSG00000140463.13 TPM= 11.68 Transcript Type= protein_coding
chr15	72751369	72783785	72751369	72783785	-	ENST00000311669.12@ADPGK	ENST00000311669.12	protein_coding	72783459,72774872,72771783,72760407,72756251,72755556,72751369	72783785,72775097,72771845,72760527,72756447,72755654,72752892	Gene ID= ENSG00000159322.17 TPM= 65.39 Transcript Type= protein_coding
chr15	72751369	72783765	72751369	72783765	-	transcript3008.chr15.nic@ADPGK	transcript3008.chr15.nic	protein_coding	72783246,72774872,72771783,72760407,72756251,72755556,72751369	72783765,72775097,72771845,72760527,72756447,72755654,72752895	Gene ID= ENSG00000159322.17 TPM= 4.67 Transcript Type= NA
chr15	72751369	72783749	72751369	72783749	-	transcript3011.chr15.nic@ADPGK	transcript3011.chr15.nic	protein_coding	72783246,72771783,72760407,72756251,72755556,72751369	72783749,72771845,72760527,72756447,72755654,72752892	Gene ID= ENSG00000159322.17 TPM= 4.67 Transcript Type= NA
chr15	72751369	72783776	72751369	72783776	-	ENST00000569534.5@ADPGK	ENST00000569534.5	protein_coding	72783459,72760407,72756251,72755556,72751369	72783776,72760527,72756447,72755654,72752895	Gene ID= ENSG00000159322.17 TPM= 4.67 Transcript Type= nonsense_mediated_decay
chr15	72757202	72783765	72757202	72783765	-	transcript3022.chr15.nic@ADPGK	transcript3022.chr15.nic	protein_coding	72783246,72774872,72771783,72757202	72783765,72775097,72771845,72760527	Gene ID= ENSG00000159322.17 TPM= 9.14 Transcript Type= NA
chr15	72757202	72783788	72757202	72783788	-	transcript3023.chr15.nic@ADPGK	transcript3023.chr15.nic	protein_coding	72783459,72774872,72771783,72757202	72783788,72775097,72771845,72760527	Gene ID= ENSG00000159322.17 TPM= 21.99 Transcript Type= NA
chr15	72751369	72783731	72751369	72783731	-	ENST00000567941.5@ADPGK	ENST00000567941.5	protein_coding	72783246,72774872,72771783,72760407,72756251,72755556,72751369	72783731,72775097,72771845,72760527,72756447,72755654,72752892	Gene ID= ENSG00000159322.17 TPM= 11.68 Transcript Type= nonsense_mediated_decay
chr15	72780051	72782546	72780051	72782546	+	transcript3028.chr15.nnic@NA	transcript3028.chr15.nnic	NA	72780051	72782546	Gene ID= novel_gene_chr15_3029 TPM= 14.01 Transcript Type= NA
chr15	73560014	73633413	73560014	73633413	-	ENST00000345330.8@NPTN	ENST00000345330.8	protein_coding	73633125,73597022,73591966,73587524,73573662,73570150,73563236,73561896,73560014	73633413,73597369,73592137,73587618,73573795,73570423,73563257,73561970,73561048	Gene ID= ENSG00000156642.16 TPM= 6.13 Transcript Type= protein_coding
chr15	73560014	73634134	73560014	73634134	-	ENST00000351217.10@NPTN	ENST00000351217.10	protein_coding	73633125,73591966,73587524,73573662,73570150,73563236,73561896,73560014	73634134,73592137,73587618,73573795,73570423,73563257,73561970,73561048	Gene ID= ENSG00000156642.16 TPM= 309.7 Transcript Type= protein_coding
chr15	73684213	73714518	73684213	73714518	+	ENST00000318443.9@CD276	ENST00000318443.9	protein_coding	73684213,73699586,73702255,73702772,73703659,73704176,73708339,73709648,73711135,73712934	73684460,73699718,73702593,73703086,73703997,73704472,73708473,73709689,73711170,73714518	Gene ID= ENSG00000103855.17 TPM= 99.54 Transcript Type= protein_coding
chr15	73711132	73714514	73711132	73714514	+	ENST00000559465.1@CD276	ENST00000559465.1	protein_coding	73711132,73712934	73711170,73714514	Gene ID= ENSG00000103855.17 TPM= 15.18 Transcript Type= retained_intron
chr15	73718282	73720995	73718282	73720995	-	transcript3059.chr15.nnic@NA	transcript3059.chr15.nnic	NA	73718282	73720995	Gene ID= novel_gene_chr15_3060 TPM= 3.5 Transcript Type= NA
chr15	73926458	73952137	73926458	73952137	+	ENST00000261921.7@LOXL1	ENST00000261921.7	protein_coding	73926458,73942854,73946417,73947067,73947807,73949459,73951831	73927885,73942962,73946554,73947223,73947902,73949574,73952137	Gene ID= ENSG00000129038.15 TPM= 29.19 Transcript Type= protein_coding
chr15	73983218	73992348	73983218	73992348	-	ENST00000316900.9@STOML1	ENST00000316900.9	protein_coding	73992091,73990815,73990351,73989108,73988599,73985318,73984659,73983218	73992348,73990945,73990457,73989257,73988802,73985513,73984868,73984130	Gene ID= ENSG00000067221.13 TPM= 3.79 Transcript Type= protein_coding
chr15	73978923	73992348	73978923	73992348	-	ENST00000541638.5@STOML1	ENST00000541638.5	protein_coding	73992091,73990351,73989108,73988599,73985318,73984659,73978923	73992348,73990457,73989257,73988802,73985513,73984871,73984130	Gene ID= ENSG00000067221.13 TPM= 37.36 Transcript Type= protein_coding
chr15	73983218	73992348	73983218	73992348	-	ENST00000316911.10@STOML1	ENST00000316911.10	protein_coding	73992091,73990351,73988599,73985318,73984659,73983218	73992348,73990457,73988802,73985513,73984871,73984130	Gene ID= ENSG00000067221.13 TPM= 8.47 Transcript Type= protein_coding
chr15	73983218	73992325	73983218	73992325	-	transcript3086.chr15.nic@STOML1	transcript3086.chr15.nic	protein_coding	73992091,73990351,73988599,73985318,73984659,73983218	73992325,73990457,73989257,73985513,73984871,73984130	Gene ID= ENSG00000067221.13 TPM= 2.63 Transcript Type= NA
chr15	73983218	73992251	73983218	73992251	-	transcript3095.chr15.nic@STOML1	transcript3095.chr15.nic	protein_coding	73992091,73988599,73985318,73984659,73983218	73992251,73990457,73985513,73984871,73984130	Gene ID= ENSG00000067221.13 TPM= 3.79 Transcript Type= NA
chr15	73994673	74043337	73994673	74043337	+	ENST00000395135.7@PML	ENST00000395135.7	protein_coding	73994673,73998004,74022828,74024857,74032572,74033156,74034478,74042989	73994941,73998476,74023408,74024927,74032715,74033414,74034530,74043337	Gene ID= ENSG00000140464.19 TPM= 15.89 Transcript Type= protein_coding
chr15	73994717	74036394	73994717	74036394	+	ENST00000354026.10@PML	ENST00000354026.10	protein_coding	73994717,73998004,74022828,74024857,74033156,74034478,74035172	73994941,73998476,74023408,74024927,74033414,74034530,74036394	Gene ID= ENSG00000140464.19 TPM= 9.47 Transcript Type= protein_coding
chr15	73994819	74036394	73994819	74036394	+	transcript3083.chr15.nic@PML	transcript3083.chr15.nic	protein_coding	73994819,73998004,74022828,74024857,74033156,74034478	73994941,73998476,74023408,74024927,74033414,74036394	Gene ID= ENSG00000140464.19 TPM= 5.97 Transcript Type= NA
chr15	73994744	74043338	73994744	74043338	+	ENST00000564428.5@PML	ENST00000564428.5	protein_coding	73994744,73998004,74022828,74024857,74033156,74034478,74042989	73994941,73998476,74023408,74024927,74033414,74034530,74043338	Gene ID= ENSG00000140464.19 TPM= 19.1 Transcript Type= protein_coding
chr15	73994717	74046771	73994717	74046771	+	ENST00000268058.7@PML	ENST00000268058.7	protein_coding	73994717,73998004,74022828,74024857,74032572,74033156,74034478,74042989,74044221	73994941,73998476,74023408,74024927,74032715,74033414,74034530,74043139,74046771	Gene ID= ENSG00000140464.19 TPM= 44.5 Transcript Type= protein_coding
chr15	73994729	74047812	73994729	74047812	+	ENST00000565898.5@PML	ENST00000565898.5	protein_coding	73994729,73998004,74022828,74024857,74033156,74034478,74042989,74044221	73994941,73998476,74023408,74024927,74033414,74034530,74043139,74047812	Gene ID= ENSG00000140464.19 TPM= 10.34 Transcript Type= protein_coding
chr15	73994744	74036394	73994744	74036394	+	ENST00000435786.6@PML	ENST00000435786.6	protein_coding	73994744,73998004,74022828,74024857,74032572,74033156,74034478	73994941,73998476,74023408,74024927,74032715,74033414,74036394	Gene ID= ENSG00000140464.19 TPM= 10.93 Transcript Type= protein_coding
chr15	73994744	74036394	73994744	74036394	+	ENST00000436891.7@PML	ENST00000436891.7	protein_coding	73994744,73998004,74022828,74024857,74032572,74033156,74034478,74035172	73994941,73998476,74023408,74024927,74032715,74033422,74034530,74036394	Gene ID= ENSG00000140464.19 TPM= 6.26 Transcript Type= protein_coding
chr15	74173671	74176872	74173671	74176872	+	ENST00000249842.7@ISLR	ENST00000249842.7	protein_coding	74173671,74174851	74174019,74176872	Gene ID= ENSG00000129009.12 TPM= 43.78 Transcript Type= protein_coding
chr15	74174501	74176872	74174501	74176872	+	ENST00000395118.1@ISLR	ENST00000395118.1	protein_coding	74174501,74174851	74174653,74176872	Gene ID= ENSG00000129009.12 TPM= 20.43 Transcript Type= protein_coding
chr15	74409289	74434467	74409289	74434467	-	ENST00000261918.8@SEMA7A	ENST00000261918.8	protein_coding	74433741,74418801,74418268,74417877,74417591,74417335,74416575,74415801,74414838,74414547,74411885,74411556,74411295,74409289	74434467,74418952,74418309,74417969,74417675,74417445,74416714,74415985,74414946,74414745,74412012,74411710,74411356,74410985	Gene ID= ENSG00000138623.9 TPM= 2.34 Transcript Type= protein_coding
chr15	74445977	74461186	74445977	74461186	-	transcript3107.chr15.nic@UBL7	transcript3107.chr15.nic	protein_coding	74461108,74458684,74456552,74452296,74451436,74450802,74449936,74449626,74449186,74448478,74445977	74461186,74458896,74456671,74452378,74451520,74450859,74450069,74449675,74449353,74448558,74446227	Gene ID= ENSG00000138629.15 TPM= 4.9 Transcript Type= NA
chr15	74445977	74461182	74445977	74461182	-	ENST00000361351.8@UBL7	ENST00000361351.8	protein_coding	74461108,74458684,74456552,74452296,74451436,74450802,74449936,74449626,74449186,74448478,74445977	74461182,74458896,74456671,74452378,74451520,74450859,74450069,74449675,74449353,74448600,74446227	Gene ID= ENSG00000138629.15 TPM= 43.63 Transcript Type= protein_coding
chr15	74445977	74461178	74445977	74461178	-	ENST00000395081.6@UBL7	ENST00000395081.6	protein_coding	74461037,74458684,74456552,74452296,74451436,74450802,74449936,74449626,74449186,74448478,74445977	74461178,74458896,74456671,74452378,74451520,74450859,74450069,74449675,74449353,74448600,74446227	Gene ID= ENSG00000138629.15 TPM= 33.12 Transcript Type= protein_coding
chr15	74445977	74461180	74445977	74461180	-	transcript3111.chr15.nnic@UBL7	transcript3111.chr15.nnic	protein_coding	74461158,74458684,74456552,74452296,74451436,74450802,74449936,74449626,74449186,74448478,74445977	74461180,74458896,74456671,74452378,74451520,74450859,74450069,74449675,74449353,74448600,74446227	Gene ID= ENSG00000138629.15 TPM= 9.77 Transcript Type= NA
chr15	74445978	74461118	74445978	74461118	-	ENST00000564488.5@UBL7	ENST00000564488.5	protein_coding	74461037,74460668,74458684,74456552,74452296,74451436,74450802,74449936,74449626,74449186,74448478,74445978	74461118,74460778,74458896,74456671,74452378,74451520,74450859,74450069,74449675,74449353,74448600,74446227	Gene ID= ENSG00000138629.15 TPM= 4.32 Transcript Type= protein_coding
chr15	74614784	74630201	74614784	74630201	+	transcript3144.chr15.nic@CLK3	transcript3144.chr15.nic	protein_coding	74614784,74619197,74620009,74622120,74622494,74624902,74625802,74627352,74627539,74627970,74628604,74628942	74615898,74619348,74620225,74622216,74622560,74625018,74625968,74627446,74627668,74628052,74628683,74630201	Gene ID= ENSG00000179335.18 TPM= 3.7 Transcript Type= NA
chr15	74614784	74630116	74614784	74630116	+	transcript3154.chr15.nic@CLK3	transcript3154.chr15.nic	protein_coding	74614784,74619197,74620009,74624902,74625802,74627352,74627539,74627970,74628604,74628942,74629707	74615898,74619348,74622560,74625018,74625968,74627446,74627668,74628052,74628683,74629032,74630116	Gene ID= ENSG00000179335.18 TPM= 4.87 Transcript Type= NA
chr15	74629161	74630118	74629161	74630118	+	ENST00000568232.1@CLK3	ENST00000568232.1	protein_coding	74629161	74630118	Gene ID= ENSG00000179335.18 TPM= 1.17 Transcript Type= retained_intron
chr15	74630558	74696043	74630558	74696043	-	ENST00000315127.8@EDC3	ENST00000315127.8	protein_coding	74695880,74674961,74671455,74655733,74640466,74635409,74630558	74696043,74675142,74671774,74656068,74640619,74635626,74632946	Gene ID= ENSG00000179151.11 TPM= 19.85 Transcript Type= protein_coding
chr15	74638327	74696040	74638327	74696040	-	transcript3169.chr15.nic@EDC3	transcript3169.chr15.nic	protein_coding	74695880,74674961,74671455,74655733,74638327	74696040,74675142,74671774,74656068,74640619	Gene ID= ENSG00000179151.11 TPM= 10.51 Transcript Type= NA
chr15	74632542	74696000	74632542	74696000	-	ENST00000568176.5@EDC3	ENST00000568176.5	protein_coding	74695880,74687091,74674961,74671455,74655733,74640466,74635409,74632542	74696000,74687179,74675142,74671774,74656068,74640619,74635626,74632946	Gene ID= ENSG00000179151.11 TPM= 3.5 Transcript Type= protein_coding
chr15	74719542	74725536	74719542	74725536	-	ENST00000395048.6@CYP1A1	ENST00000395048.6	protein_coding	74725441,74722273,74721591,74721414,74721199,74720967,74719542	74725536,74723123,74721717,74721503,74721322,74721053,74720774	Gene ID= ENSG00000140465.13 TPM= 3.5 Transcript Type= protein_coding
chr15	74719542	74725610	74719542	74725610	-	ENST00000379727.7@CYP1A1	ENST00000379727.7	protein_coding	74725441,74722273,74721591,74721414,74721199,74720967,74719542	74725610,74723126,74721717,74721503,74721322,74721053,74720774	Gene ID= ENSG00000140465.13 TPM= 3.5 Transcript Type= protein_coding
chr15	74752985	74756599	74752985	74756599	+	transcript3178.chr15.nic@CYP1A2	transcript3178.chr15.nic	protein_coding	74752985,74754791	74753270,74756599	Gene ID= ENSG00000140505.6 TPM= 2.34 Transcript Type= NA
chr15	74782057	74803198	74782057	74803198	+	ENST00000220003.13@CSK	ENST00000220003.13	protein_coding	74782057,74798233,74798615,74798826,74799272,74800412,74800681,74800823,74801012,74801522,74801695,74801997,74802331	74782720,74798312,74798728,74798938,74799491,74800505,74800746,74800922,74801102,74801595,74801890,74802083,74803198	Gene ID= ENSG00000103653.16 TPM= 65.39 Transcript Type= protein_coding
chr15	74782089	74802882	74782089	74802882	+	ENST00000439220.6@CSK	ENST00000439220.6	protein_coding	74782089,74782668,74798233,74798615,74798826,74799272,74800412,74800681,74800823,74801012,74801522,74801695,74801997,74802331	74782148,74782720,74798312,74798728,74798938,74799491,74800505,74800746,74800922,74801102,74801595,74801890,74802083,74802882	Gene ID= ENSG00000103653.16 TPM= 12.84 Transcript Type= protein_coding
chr15	74786004	74791589	74786004	74791589	-	transcript3190.chr15.nnic@NA	transcript3190.chr15.nnic	NA	74786004	74791589	Gene ID= novel_gene_chr15_3191 TPM= 60.71 Transcript Type= NA
chr15	74836118	74843346	74836118	74843346	-	ENST00000570276.5@ULK3	ENST00000570276.5	protein_coding	74843004,74842280,74842075,74841405,74840234,74839558,74839268,74839010,74838643,74838440,74838266,74838152,74837751,74837369,74836118	74843346,74842420,74842195,74841509,74840641,74839713,74839373,74839050,74838745,74838504,74838344,74838192,74837798,74837435,74837244	Gene ID= ENSG00000140474.12 TPM= 19.02 Transcript Type= retained_intron
chr15	74836118	74843193	74836118	74843193	-	ENST00000569437.5@ULK3	ENST00000569437.5	protein_coding	74843004,74842280,74842075,74841405,74840498,74840234,74839558,74839268,74839010,74838643,74838440,74838266,74838152,74837757,74837369,74836118	74843193,74842420,74842195,74841509,74840641,74840316,74839713,74839373,74839050,74838745,74838504,74838344,74838192,74837798,74837435,74837244	Gene ID= ENSG00000140474.12 TPM= 29.41 Transcript Type= protein_coding
chr15	74836116	74843197	74836116	74843197	-	ENST00000440863.6@ULK3	ENST00000440863.6	protein_coding	74843004,74842280,74842075,74841405,74840498,74840234,74839558,74839268,74839010,74838643,74838440,74838266,74838152,74837751,74837369,74836116	74843197,74842420,74842195,74841509,74840641,74840316,74839713,74839373,74839050,74838745,74838504,74838344,74838192,74837798,74837435,74837244	Gene ID= ENSG00000140474.12 TPM= 25.44 Transcript Type= protein_coding
chr15	74836118	74843139	74836118	74843139	-	ENST00000561725.5@ULK3	ENST00000561725.5	protein_coding	74843004,74842280,74842075,74841405,74840234,74839558,74839268,74839010,74838643,74838440,74838266,74838152,74837757,74837369,74836118	74843139,74842420,74842195,74841509,74840641,74839713,74839373,74839050,74838745,74838504,74838344,74838192,74837798,74837435,74837244	Gene ID= ENSG00000140474.12 TPM= 15.4 Transcript Type= retained_intron
chr15	74836118	74843129	74836118	74843129	-	ENST00000566479.5@ULK3	ENST00000566479.5	protein_coding	74843004,74842280,74842075,74841405,74840234,74839558,74839268,74839010,74838643,74838440,74838266,74838152,74837751,74837369,74836118	74843129,74842420,74842195,74841509,74840641,74839713,74839373,74839050,74838745,74838504,74838344,74838173,74837798,74837435,74837244	Gene ID= ENSG00000140474.12 TPM= 2.38 Transcript Type= retained_intron
chr15	74843730	74873379	74843730	74873379	-	transcript3235.chr15.nnic@SCAMP2	transcript3235.chr15.nnic	protein_coding	74873199,74854581,74854021,74852069,74851353,74850514,74848600,74845473,74844893,74843730	74873379,74854649,74854119,74852186,74851481,74850673,74848701,74845593,74845217,74843794	Gene ID= ENSG00000140497.16 TPM= 14.4 Transcript Type= NA
chr15	74843730	74873365	74843730	74873365	-	ENST00000268099.13@SCAMP2	ENST00000268099.13	protein_coding	74873199,74854581,74854021,74852069,74851353,74850514,74848600,74845473,74843730	74873365,74854649,74854119,74852186,74851481,74850673,74848701,74845593,74845217	Gene ID= ENSG00000140497.16 TPM= 200.04 Transcript Type= protein_coding
chr15	74890007	74902219	74890007	74902219	+	ENST00000352410.8@MPI	ENST00000352410.8	protein_coding	74890007,74890527,74891379,74892661,74893138,74896152,74897011,74897512	74890089,74890654,74891579,74892802,74893320,74896325,74897219,74902219	Gene ID= ENSG00000178802.17 TPM= 11.68 Transcript Type= protein_coding
chr15	74890062	74893786	74890062	74893786	+	ENST00000565576.5@MPI	ENST00000565576.5	protein_coding	74890062,74890527,74891379,74892661,74893138	74890089,74890654,74891579,74892802,74893786	Gene ID= ENSG00000178802.17 TPM= 1.17 Transcript Type= protein_coding
chr15	74890039	74899441	74890039	74899441	+	ENST00000566377.5@MPI	ENST00000566377.5	protein_coding	74890039,74890527,74891379,74892661,74893138,74896152,74897512	74890089,74890654,74891579,74892802,74893320,74896325,74899441	Gene ID= ENSG00000178802.17 TPM= 1.17 Transcript Type= protein_coding
chr15	74899987	74907121	74899987	74907121	-	ENST00000357635.9@FAM219B	ENST00000357635.9	protein_coding	74906587,74906278,74905154,74904664,74899987	74907121,74906365,74905231,74904712,74902786	Gene ID= ENSG00000178761.14 TPM= 52.16 Transcript Type= protein_coding
chr15	74899992	74906883	74899992	74906883	-	ENST00000569524.5@FAM219B	ENST00000569524.5	protein_coding	74906587,74905154,74904664,74899992	74906883,74905231,74904712,74902786	Gene ID= ENSG00000178761.14 TPM= 15.96 Transcript Type= nonsense_mediated_decay
chr15	74899992	74906793	74899992	74906793	-	ENST00000563671.5@FAM219B	ENST00000563671.5	protein_coding	74906587,74906278,74905154,74904664,74902604,74901950,74899992	74906793,74906365,74905231,74904712,74902786,74902063,74900137	Gene ID= ENSG00000178761.14 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr15	74899993	74906796	74899993	74906796	-	ENST00000566894.1@FAM219B	ENST00000566894.1	protein_coding	74906587,74904664,74899993	74906796,74906365,74902786	Gene ID= ENSG00000178761.14 TPM= 5.06 Transcript Type= retained_intron
chr15	74899992	74906837	74899992	74906837	-	ENST00000563119.5@FAM219B	ENST00000563119.5	protein_coding	74906587,74906278,74905154,74904664,74902604,74899992	74906837,74906365,74905231,74904712,74902786,74902063	Gene ID= ENSG00000178761.14 TPM= 3.89 Transcript Type= protein_coding
chr15	74919791	74938168	74919791	74938168	-	ENST00000322347.10@COX5A	ENST00000322347.10	protein_coding	74937915,74929116,74926766,74923648,74919791	74938168,74929232,74926887,74923770,74920442	Gene ID= ENSG00000178741.11 TPM= 8.17 Transcript Type= protein_coding
chr15	74920275	74938080	74920275	74938080	-	ENST00000567270.5@COX5A	ENST00000567270.5	protein_coding	74937915,74926766,74923648,74920275	74938080,74926887,74923770,74920442	Gene ID= ENSG00000178741.11 TPM= 3.5 Transcript Type= protein_coding
chr15	74954416	74957464	74954416	74957464	-	ENST00000322177.5@RPP25	ENST00000322177.5	protein_coding	74954416	74957464	Gene ID= ENSG00000178718.6 TPM= 25.69 Transcript Type= protein_coding
chr15	75023555	75050726	75023555	75050726	+	ENST00000342932.7@PPCDC	ENST00000342932.7	protein_coding	75023555,75028247,75043441,75044386,75048553,75049150	75023626,75028453,75043536,75044514,75048721,75050726	Gene ID= ENSG00000138621.11 TPM= 4.67 Transcript Type= protein_coding
chr15	75206954	75211521	75206954	75211521	+	transcript3302.chr15.nic@C15orf39	transcript3302.chr15.nic	protein_coding	75206954,75210749	75208824,75211521	Gene ID= ENSG00000167173.18 TPM= 30.36 Transcript Type= NA
chr15	75206049	75212169	75206049	75212169	+	ENST00000567617.1@C15orf39	ENST00000567617.1	protein_coding	75206049,75210749	75208876,75212169	Gene ID= ENSG00000167173.18 TPM= 23.35 Transcript Type= protein_coding
chr15	75335891	75340273	75335891	75340273	+	ENST00000267935.12@COMMD4	ENST00000267935.12	protein_coding	75335891,75338062,75338355,75338646,75338985,75339264,75339702,75339965	75336092,75338133,75338420,75338685,75339104,75339344,75339878,75340273	Gene ID= ENSG00000140365.15 TPM= 19.27 Transcript Type= protein_coding
chr15	75336059	75340273	75336059	75340273	+	ENST00000338995.10@COMMD4	ENST00000338995.10	protein_coding	75336059,75338062,75338355,75338646,75338985,75339264,75339965	75336092,75338133,75338420,75338685,75339104,75339344,75340273	Gene ID= ENSG00000140365.15 TPM= 1.75 Transcript Type= protein_coding
chr15	75346990	75357114	75346990	75357114	+	ENST00000355059.8@NEIL1	ENST00000355059.8	protein_coding	75346990,75348884,75352111,75352324,75352602,75353739,75354250,75354431,75354653,75354964	75347473,75349339,75352230,75352387,75352701,75353866,75354277,75354492,75354818,75357114	Gene ID= ENSG00000140398.13 TPM= 2.34 Transcript Type= protein_coding
chr15	75347638	75355247	75347638	75355247	+	ENST00000569035.5@NEIL1	ENST00000569035.5	protein_coding	75347638,75348884,75352111,75352324,75352602,75353739,75354250,75354431,75354653,75354964	75348026,75349339,75352230,75352387,75352701,75353866,75354277,75354492,75354818,75355247	Gene ID= ENSG00000140398.13 TPM= 1.17 Transcript Type= protein_coding
chr15	75347038	75355247	75347038	75355247	+	transcript3375.chr15.nic@NEIL1	transcript3375.chr15.nic	protein_coding	75347038,75348884,75352111,75352324,75352602,75354250,75354431,75354653,75354964	75347473,75349339,75352230,75352387,75353866,75354277,75354492,75354818,75355247	Gene ID= ENSG00000140398.13 TPM= 2.34 Transcript Type= NA
chr15	75347038	75355247	75347038	75355247	+	transcript3385.chr15.nic@NEIL1	transcript3385.chr15.nic	protein_coding	75347038,75348884,75352111,75352324,75352602,75354250,75354653,75354964	75347473,75349339,75352230,75352387,75352701,75354492,75354818,75355247	Gene ID= ENSG00000140398.13 TPM= 3.5 Transcript Type= NA
chr15	75347888	75355247	75347888	75355247	+	transcript3387.chr15.nnic@NEIL1	transcript3387.chr15.nnic	protein_coding	75347888,75348884,75351301,75352111,75352324,75352602,75354653,75354964	75348026,75349339,75351376,75352230,75352387,75354492,75354818,75355247	Gene ID= ENSG00000140398.13 TPM= 2.92 Transcript Type= NA
chr15	75347038	75355247	75347038	75355247	+	transcript3392.chr15.nic@NEIL1	transcript3392.chr15.nic	protein_coding	75347038,75348884,75352111,75352324,75352602,75354653,75354964	75347473,75349339,75352230,75352387,75354492,75354818,75355247	Gene ID= ENSG00000140398.13 TPM= 4.09 Transcript Type= NA
chr15	75355792	75368630	75355792	75368630	-	ENST00000267978.9@MAN2C1	ENST00000267978.9	protein_coding	75368483,75368073,75367511,75366522,75364488,75363999,75362642,75362343,75361855,75361604,75361286,75361046,75360565,75360090,75359903,75359620,75359328,75359059,75358704,75358462,75358201,75356793,75356606,75356301,75356110,75355792	75368630,75368198,75367634,75366592,75364665,75364188,75362748,75362453,75361947,75361720,75361381,75361191,75360688,75360211,75359988,75359775,75359425,75359153,75358808,75358618,75358344,75356902,75356685,75356449,75356219,75356032	Gene ID= ENSG00000140400.16 TPM= 38.43 Transcript Type= protein_coding
chr15	75355792	75368624	75355792	75368624	-	transcript3324.chr15.nic@MAN2C1	transcript3324.chr15.nic	protein_coding	75368073,75367511,75366522,75364488,75363999,75362642,75362343,75361855,75361604,75361286,75361046,75360565,75360090,75359903,75359620,75359328,75359059,75358704,75358462,75358201,75356793,75356606,75356301,75356110,75355792	75368624,75367634,75366592,75364665,75364188,75362748,75362453,75361947,75361720,75361381,75361191,75360688,75360211,75359988,75359775,75359425,75359153,75358808,75358618,75358344,75356902,75356685,75356449,75356219,75356032	Gene ID= ENSG00000140400.16 TPM= 10.59 Transcript Type= NA
chr15	75355792	75368621	75355792	75368621	-	transcript3338.chr15.nic@MAN2C1	transcript3338.chr15.nic	protein_coding	75368483,75368073,75367511,75366522,75364488,75363999,75362642,75362343,75361855,75361604,75361286,75361046,75360565,75360090,75359903,75359059,75358704,75358462,75358201,75356793,75356606,75356301,75356110,75355792	75368621,75368198,75367634,75366592,75364665,75364188,75362748,75362453,75361947,75361720,75361381,75361191,75360688,75360211,75359988,75359775,75358808,75358618,75358344,75356902,75356685,75356449,75356219,75356032	Gene ID= ENSG00000140400.16 TPM= 7.1 Transcript Type= NA
chr15	75355792	75368595	75355792	75368595	-	ENST00000565683.5@MAN2C1	ENST00000565683.5	protein_coding	75368483,75368073,75367511,75366522,75364488,75363999,75362642,75362343,75361855,75361604,75361286,75361046,75360565,75360090,75359903,75359620,75359328,75359059,75358704,75358462,75358201,75356793,75356606,75356301,75356110,75355792	75368595,75368198,75367634,75366592,75364665,75364188,75362748,75362453,75361947,75361720,75361381,75361191,75360688,75360211,75359988,75359775,75359438,75359191,75358808,75358618,75358344,75356902,75356685,75356449,75356219,75356032	Gene ID= ENSG00000140400.16 TPM= 3.6 Transcript Type= protein_coding
chr15	75355792	75368592	75355792	75368592	-	ENST00000569482.5@MAN2C1	ENST00000569482.5	protein_coding	75368483,75368073,75367511,75366522,75364488,75363999,75362642,75362343,75361855,75361604,75361286,75361046,75360565,75360090,75359903,75359620,75359328,75359059,75358704,75358462,75358201,75356793,75356606,75356301,75356110,75355792	75368592,75368198,75367634,75366592,75364665,75364188,75362748,75362453,75361947,75361720,75361381,75361191,75360688,75360211,75359988,75359775,75359425,75359153,75358808,75358618,75358344,75356902,75356685,75356380,75356219,75356032	Gene ID= ENSG00000140400.16 TPM= 3.95 Transcript Type= protein_coding
chr15	75361408	75363817	75361408	75363817	+	transcript3405.chr15.nnic@NA	transcript3405.chr15.nnic	NA	75361408	75363817	Gene ID= novel_gene_chr15_3406 TPM= 3.5 Transcript Type= NA
chr15	75368155	75369584	75368155	75369584	+	ENST00000563278.1@AC068338.2	ENST00000563278.1	lincRNA	75368155	75369584	Gene ID= ENSG00000260274.1 TPM= 1.17 Transcript Type= lincRNA
chr15	75369379	75451704	75369379	75451704	-	ENST00000394947.7@SIN3A	ENST00000394947.7	protein_coding	75451423,75430187,75422647,75414205,75412763,75411492,75410134,75409836,75407055,75401852,75400730,75400040,75396258,75394680,75392242,75389652,75384264,75381613,75380629,75375665,75369379	75451704,75430408,75422823,75414311,75413045,75411743,75410286,75409991,75407144,75401970,75400940,75400156,75396496,75394863,75392815,75389821,75384437,75381705,75380723,75375872,75372209	Gene ID= ENSG00000169375.15 TPM= 10.51 Transcript Type= protein_coding
chr15	75467127	75579447	75467127	75579447	-	transcript3409.chr15.nnic@PTPN9	transcript3409.chr15.nnic	protein_coding	75579386,75578714,75527118,75524209,75523121,75517259,75508917,75505675,75490208,75479848,75473689,75470680,75469792,75467127	75579447,75579299,75527261,75524298,75523245,75517364,75509027,75506003,75490301,75479914,75473767,75470830,75469999,75468983	Gene ID= ENSG00000169410.9 TPM= 63.05 Transcript Type= NA
chr15	75585509	75587814	75585509	75587814	-	transcript3421.chr15.nnic@NA	transcript3421.chr15.nnic	NA	75585509	75587814	Gene ID= novel_gene_chr15_3422 TPM= 2.34 Transcript Type= NA
chr15	75598083	75625794	75598083	75625794	-	ENST00000567134.5@SNUPN	ENST00000567134.5	protein_coding	75625666,75622342,75620894,75617408,75609890,75609558,75607216,75605150,75601138,75598083	75625794,75622490,75621056,75617552,75609994,75609651,75607313,75605227,75601218,75598681	Gene ID= ENSG00000169371.13 TPM= 3.5 Transcript Type= protein_coding
chr15	75598091	75625723	75598091	75625723	-	transcript3424.chr15.nic@SNUPN	transcript3424.chr15.nic	protein_coding	75625666,75620894,75617408,75609890,75609558,75607216,75605150,75601138,75600637,75598091	75625723,75621056,75617552,75609994,75609651,75607313,75605227,75601218,75600890,75598681	Gene ID= ENSG00000169371.13 TPM= 3.5 Transcript Type= NA
chr15	75598083	75625815	75598083	75625815	-	ENST00000308588.9@SNUPN	ENST00000308588.9	protein_coding	75625666,75620894,75617408,75609890,75609558,75607216,75605150,75601138,75598083	75625815,75621056,75617552,75609994,75609651,75607313,75605227,75601218,75598681	Gene ID= ENSG00000169371.13 TPM= 38.53 Transcript Type= protein_coding
chr15	75598122	75625693	75598122	75625693	-	ENST00000564675.5@SNUPN	ENST00000564675.5	protein_coding	75625336,75620894,75617408,75609890,75609558,75607216,75605150,75601138,75598122	75625693,75621056,75617552,75609994,75609651,75607313,75605227,75601218,75598681	Gene ID= ENSG00000169371.13 TPM= 10.51 Transcript Type= protein_coding
chr15	75639087	75640323	75639087	75640323	-	ENST00000403490.2@IMP3	ENST00000403490.2	protein_coding	75639087	75640323	Gene ID= ENSG00000177971.8 TPM= 117.93 Transcript Type= protein_coding
chr15	75647906	75662301	75647906	75662301	+	ENST00000308527.5@SNX33	ENST00000308527.5	protein_coding	75647906,75656962	75650573,75662301	Gene ID= ENSG00000173548.8 TPM= 28.02 Transcript Type= protein_coding
chr15	75674623	75712848	75674623	75712848	-	transcript3433.chr15.nnic@CSPG4	transcript3433.chr15.nnic	protein_coding	75712668,75693070,75685219,75684736,75682843,75682607,75682293,75677703,75674623	75712848,75693233,75685701,75684912,75683041,75682741,75682459,75677886,75677384	Gene ID= ENSG00000173546.7 TPM= 22.18 Transcript Type= NA
chr15	75674322	75712848	75674322	75712848	-	ENST00000308508.5@CSPG4	ENST00000308508.5	protein_coding	75712668,75693070,75687276,75685219,75684736,75682843,75682607,75682293,75677703,75674322	75712848,75693233,75690812,75685701,75684912,75683041,75682741,75682459,75677886,75677384	Gene ID= ENSG00000173546.7 TPM= 21.02 Transcript Type= protein_coding
chr15	75843556	75901044	75843556	75901044	+	transcript3438.chr15.nnic@UBE2Q2	transcript3438.chr15.nnic	protein_coding	75843556,75846154,75854386,75859878,75868951,75873428,75876187,75877961,75879098,75883366,75890435,75890919,75896995,75899427	75843846,75846220,75854487,75859982,75869010,75873568,75876271,75878021,75879188,75883424,75890483,75891014,75897061,75901044	Gene ID= ENSG00000140367.11 TPM= 4.09 Transcript Type= NA
chr15	75843377	75901044	75843377	75901044	+	transcript3444.chr15.nnic@UBE2Q2	transcript3444.chr15.nnic	protein_coding	75843377,75854386,75859878,75868951,75873428,75876187,75877961,75879098,75883366,75890435,75890919,75899427	75843846,75854487,75859982,75869010,75873568,75876271,75878021,75879188,75883424,75890483,75891014,75901044	Gene ID= ENSG00000140367.11 TPM= 3.5 Transcript Type= NA
chr15	75843447	75901044	75843447	75901044	+	transcript3446.chr15.nnic@UBE2Q2	transcript3446.chr15.nnic	protein_coding	75843447,75854386,75859878,75868951,75876187,75877961,75879098,75883366,75890435,75890919,75896995,75899427	75843846,75854487,75859982,75869010,75876271,75878021,75879188,75883424,75890483,75891014,75897061,75901044	Gene ID= ENSG00000140367.11 TPM= 4.09 Transcript Type= NA
chr15	75843414	75901044	75843414	75901044	+	transcript3451.chr15.nic@UBE2Q2	transcript3451.chr15.nic	protein_coding	75843414,75854386,75859878,75868951,75873428,75876187,75877961,75879098,75883366,75899427	75843846,75854487,75859982,75869010,75873568,75876271,75878021,75879188,75883424,75901044	Gene ID= ENSG00000140367.11 TPM= 10.51 Transcript Type= NA
chr15	75903859	75942510	75903859	75942510	+	ENST00000308275.7@FBXO22	ENST00000308275.7	protein_coding	75903859,75904491,75913203,75914110,75917230,75929884,75932685	75904103,75904629,75913290,75914205,75917394,75930049,75942510	Gene ID= ENSG00000167196.13 TPM= 7.01 Transcript Type= protein_coding
chr15	75903878	75934107	75903878	75934107	+	ENST00000569022.1@FBXO22	ENST00000569022.1	protein_coding	75903878,75913203,75914110,75917230,75929884,75932685	75904103,75913290,75914205,75917394,75930049,75934107	Gene ID= ENSG00000167196.13 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr15	76216321	76311471	76216321	76311471	-	transcript3472.chr15.nic@ETFA	transcript3472.chr15.nic	protein_coding	76311350,76309932,76295591,76292619,76292431,76287846,76286371,76285637,76283757,76274412,76231333,76225849,76216321	76311471,76310064,76295737,76292700,76292513,76287945,76286481,76285738,76283825,76274494,76231398,76225929,76216597	Gene ID= ENSG00000140374.15 TPM= 2.34 Transcript Type= NA
chr15	76215355	76311469	76215355	76311469	-	ENST00000557943.5@ETFA	ENST00000557943.5	protein_coding	76311350,76295591,76292619,76292431,76287846,76286371,76285637,76283757,76274412,76231333,76225849,76215355	76311469,76295737,76292700,76292513,76287945,76286481,76285738,76283825,76274494,76231398,76225929,76216597	Gene ID= ENSG00000140374.15 TPM= 2.34 Transcript Type= protein_coding
chr15	76348188	76905346	76348188	76905346	-	transcript3480.chr15.nic@SCAPER	transcript3480.chr15.nic	protein_coding	76905299,76883812,76862416,76857809,76841734,76804533,76800248,76795280,76774855,76771724,76766918,76765563,76765337,76764961,76753808,76733229,76728595,76705903,76702850,76701758,76665653,76621764,76574158,76504859,76471212,76434078,76404524,76381378,76376162,76353949,76351237,76348188	76905346,76883876,76862533,76857879,76841931,76804633,76800364,76795440,76775117,76771954,76767088,76765638,76765454,76765072,76753948,76733384,76728737,76705984,76703002,76701865,76665789,76621829,76574284,76504974,76471335,76434310,76404679,76381615,76376311,76354140,76351288,76348736	Gene ID= ENSG00000140386.12 TPM= 5.84 Transcript Type= NA
chr15	76931619	76954392	76931619	76954392	+	ENST00000394885.7@RCN2	ENST00000394885.7	protein_coding	76931619,76932361,76935526,76943758,76947421,76948410,76949070	76931985,76932466,76935722,76943871,76947517,76948552,76954392	Gene ID= ENSG00000117906.13 TPM= 120.26 Transcript Type= protein_coding
chr15	76931738	76949860	76931738	76949860	+	ENST00000320963.9@RCN2	ENST00000320963.9	protein_coding	76931738,76932361,76935526,76941637,76943758,76947421,76948410,76949070	76931985,76932466,76935722,76941690,76943871,76947517,76948552,76949860	Gene ID= ENSG00000117906.13 TPM= 3.5 Transcript Type= protein_coding
chr15	76995131	77037331	76995131	77037331	+	ENST00000379595.7@PSTPIP1	ENST00000379595.7	protein_coding	76995131,77018148,77018457,77025284,77025498,77027852,77028554,77029529,77030502,77031180,77032298,77032862,77035508,77035811,77037045	76995609,77018248,77018531,77025318,77025604,77027914,77028652,77029574,77030581,77031278,77032394,77032952,77035563,77035935,77037331	Gene ID= ENSG00000140368.12 TPM= 2.34 Transcript Type= protein_coding
chr15	77035694	77037332	77035694	77037332	+	ENST00000560064.1@PSTPIP1	ENST00000560064.1	protein_coding	77035694,77037045	77035935,77037332	Gene ID= ENSG00000140368.12 TPM= 3.5 Transcript Type= retained_intron
chr15	77046060	77071122	77046060	77071122	-	ENST00000561277.5@TSPAN3	ENST00000561277.5	protein_coding	77071005,77056064,77055789,77054178,77052777,77052385,77046060	77071122,77056255,77055863,77054279,77052929,77052468,77046927	Gene ID= ENSG00000140391.14 TPM= 31.53 Transcript Type= protein_coding
chr15	77060706	77065481	77060706	77065481	+	transcript3515.chr15.nnic@NA	transcript3515.chr15.nnic	NA	77060706	77065481	Gene ID= novel_gene_chr15_3516 TPM= 16.35 Transcript Type= NA
chr15	77108158	77420249	77108158	77420249	-	transcript3524.chr15.nnic@PEAK1	transcript3524.chr15.nnic	protein_coding	77420006,77365163,77361315,77286419,77108158	77420249,77365225,77361431,77286504,77110146	Gene ID= ENSG00000173517.10 TPM= 2.92 Transcript Type= NA
chr15	77108158	77420154	77108158	77420154	-	transcript3528.chr15.nnic@PEAK1	transcript3528.chr15.nnic	protein_coding	77420006,77365163,77286419,77108158	77420154,77365225,77286504,77110146	Gene ID= ENSG00000173517.10 TPM= 5.25 Transcript Type= NA
chr15	77280565	77420227	77280565	77420227	-	transcript3532.chr15.nic@PEAK1	transcript3532.chr15.nic	protein_coding	77420006,77365163,77280565	77420227,77365225,77286504	Gene ID= ENSG00000173517.10 TPM= 2.34 Transcript Type= NA
chr15	77420674	77485603	77420674	77485603	+	ENST00000381714.7@HMG20A	ENST00000381714.7	protein_coding	77420674,77447719,77458404,77464240,77467095,77470910,77471783,77477555,77478295,77479179,77482970	77421004,77447811,77458496,77464387,77467307,77471042,77471814,77477630,77478510,77479321,77485603	Gene ID= ENSG00000140382.14 TPM= 2.34 Transcript Type= protein_coding
chr15	77420463	77480636	77420463	77480636	+	transcript3539.chr15.nic@HMG20A	transcript3539.chr15.nic	protein_coding	77420463,77458404,77464240,77467095,77470910,77471783,77477555,77478295,77479179	77421004,77458496,77464387,77467307,77471042,77471814,77477630,77478510,77480636	Gene ID= ENSG00000140382.14 TPM= 3.5 Transcript Type= NA
chr15	77420651	77485607	77420651	77485607	+	ENST00000336216.8@HMG20A	ENST00000336216.8	protein_coding	77420651,77458404,77464240,77467095,77470910,77471783,77477555,77478295,77479179,77482970	77421004,77458496,77464387,77467307,77471042,77471814,77477630,77478510,77479321,77485607	Gene ID= ENSG00000140382.14 TPM= 18.68 Transcript Type= protein_coding
chr15	77993223	77994844	77993223	77994844	-	transcript3550.chr15.nnic@NA	transcript3550.chr15.nnic	NA	77993223	77994844	Gene ID= novel_gene_chr15_3551 TPM= 2.34 Transcript Type= NA
chr15	77994985	78077743	77994985	78077743	-	transcript3553.chr15.nnic@TBC1D2B	transcript3553.chr15.nnic	protein_coding	78077293,78054034,78044900,78034690,78034475,78030007,78025259,78024156,78017847,78016546,78012823,78008997,78003305,78001619,77994985	78077743,78054187,78045068,78034739,78034569,78030170,78025497,78024539,78017957,78016739,78013317,78009114,78003490,78001740,77998355	Gene ID= ENSG00000167202.11 TPM= 18.88 Transcript Type= NA
chr15	77994975	78077685	77994975	78077685	-	transcript3554.chr15.nnic@TBC1D2B	transcript3554.chr15.nnic	protein_coding	78077293,78054034,78044900,78030007,78025259,78024156,78017847,78016546,78012823,78008997,78003305,78001619,77998195,77994975	78077685,78054187,78045068,78030170,78025497,78024539,78017957,78016739,78013317,78009114,78003490,78001740,77998355,77995063	Gene ID= ENSG00000167202.11 TPM= 2.53 Transcript Type= NA
chr15	78002482	78077743	78002482	78077743	-	transcript3562.chr15.nnic@TBC1D2B	transcript3562.chr15.nnic	protein_coding	78077293,78054034,78044900,78034690,78034475,78030007,78025259,78024156,78017847,78016546,78012823,78008997,78002482	78077743,78054187,78045068,78034739,78034569,78030170,78025497,78024539,78017957,78016739,78013317,78009114,78003490	Gene ID= ENSG00000167202.11 TPM= 2.53 Transcript Type= NA
chr15	78002482	78077743	78002482	78077743	-	transcript3568.chr15.nic@TBC1D2B	transcript3568.chr15.nic	protein_coding	78077293,78054034,78044900,78030007,78025259,78024156,78017847,78016546,78012823,78008997,78002482	78077743,78054187,78045068,78030170,78025497,78024539,78017957,78016739,78013317,78009114,78003490	Gene ID= ENSG00000167202.11 TPM= 6.04 Transcript Type= NA
chr15	77994987	77999381	77994987	77999381	-	ENST00000418039.2@TBC1D2B	ENST00000418039.2	protein_coding	77994987	77999381	Gene ID= ENSG00000167202.11 TPM= 16.35 Transcript Type= retained_intron
chr15	77994985	78077652	77994985	78077652	-	ENST00000300584.7@TBC1D2B	ENST00000300584.7	protein_coding	78077293,78054034,78044900,78030007,78025259,78024156,78017847,78016546,78012823,78008997,78003305,78001619,77994985	78077652,78054187,78045068,78030170,78025497,78024539,78017957,78016739,78013317,78009114,78003490,78001740,77998355	Gene ID= ENSG00000167202.11 TPM= 57.41 Transcript Type= protein_coding
chr15	77994986	78077724	77994986	78077724	-	ENST00000409931.7@TBC1D2B	ENST00000409931.7	protein_coding	78077293,78054034,78044900,78030007,78025259,78024156,78017847,78016546,78012823,78008997,78003305,78001619,77994986	78077724,78054187,78045068,78030170,78025497,78024539,78017957,78016739,78013317,78009114,78003490,78001740,77998303	Gene ID= ENSG00000167202.11 TPM= 20.05 Transcript Type= protein_coding
chr15	78075199	78077723	78075199	78077723	-	transcript3571.chr15.nnic@NA	transcript3571.chr15.nnic	NA	78075199	78077723	Gene ID= novel_gene_chr15_3572 TPM= 4.67 Transcript Type= NA
chr15	78104606	78131544	78104606	78131544	-	ENST00000258930.7@CIB2	ENST00000258930.7	protein_coding	78131165,78123705,78111165,78109235,78105739,78104606	78131544,78123739,78111276,78109382,78105934,78105332	Gene ID= ENSG00000136425.12 TPM= 3.5 Transcript Type= protein_coding
chr15	78149360	78169715	78149360	78169715	+	ENST00000560667.5@IDH3A	ENST00000560667.5	protein_coding	78149360,78155213,78156908,78157548,78160092,78161581,78162234,78163507,78163716,78164992,78166150,78168922	78149430,78155275,78157162,78157631,78160206,78161768,78162367,78163609,78163780,78165076,78166302,78169715	Gene ID= ENSG00000166411.13 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr15	78149321	78171949	78149321	78171949	+	ENST00000299518.6@IDH3A	ENST00000299518.6	protein_coding	78149321,78155213,78157548,78160092,78161581,78162234,78163507,78163716,78164992,78166150,78168922	78149430,78155275,78157631,78160206,78161768,78162367,78163609,78163780,78165076,78166302,78171949	Gene ID= ENSG00000166411.13 TPM= 5.84 Transcript Type= protein_coding
chr15	78264520	78282192	78264520	78282192	+	transcript3605.chr15.nnic@DNAJA4	transcript3605.chr15.nnic	protein_coding	78264520,78264757,78270497,78273095,78274197,78275498,78280045,78280245	78264589,78264895,78270677,78273199,78274424,78275728,78280145,78282192	Gene ID= ENSG00000140403.12 TPM= 4.67 Transcript Type= NA
chr15	78264562	78282196	78264562	78282196	+	ENST00000343789.7@DNAJA4	ENST00000343789.7	protein_coding	78264562,78264757,78270497,78273095,78274197,78275498,78280045,78280245	78264585,78264895,78270677,78273199,78274424,78275728,78280145,78282196	Gene ID= ENSG00000140403.12 TPM= 3.5 Transcript Type= protein_coding
chr15	78264574	78282192	78264574	78282192	+	ENST00000394852.7@DNAJA4	ENST00000394852.7	protein_coding	78264574,78270497,78273095,78274197,78275498,78280045,78280245	78264895,78270677,78273199,78274424,78275728,78280145,78282192	Gene ID= ENSG00000140403.12 TPM= 18.68 Transcript Type= protein_coding
chr15	78283235	78299605	78283235	78299605	-	ENST00000558311.5@WDR61	ENST00000558311.5	protein_coding	78299562,78295675,78294946,78293167,78292616,78289951,78289619,78288289,78286041,78285261,78283235	78299605,78295793,78294973,78293272,78292788,78290099,78289712,78288382,78286133,78285339,78283521	Gene ID= ENSG00000140395.8 TPM= 2.34 Transcript Type= protein_coding
chr15	78283235	78299800	78283235	78299800	-	transcript3597.chr15.nic@WDR61	transcript3597.chr15.nic	protein_coding	78299562,78295675,78294946,78293167,78292616,78289951,78289619,78288289,78286041,78285261,78283235	78299800,78295725,78294973,78293272,78292885,78290099,78289712,78288382,78286133,78285339,78283521	Gene ID= ENSG00000140395.8 TPM= 2.34 Transcript Type= NA
chr15	78283235	78299794	78283235	78299794	-	ENST00000267973.6@WDR61	ENST00000267973.6	protein_coding	78299562,78295675,78294946,78293167,78292616,78289951,78289619,78288289,78286041,78285261,78283235	78299794,78295725,78294973,78293272,78292788,78290099,78289712,78288382,78286133,78285339,78283521	Gene ID= ENSG00000140395.8 TPM= 54.88 Transcript Type= protein_coding
chr15	78438189	78501456	78438189	78501456	+	ENST00000258886.12@IREB2	ENST00000258886.12	protein_coding	78438189,78439795,78462922,78465251,78466271,78470532,78471741,78473242,78476188,78478297,78483318,78484761,78485705,78487733,78488180,78488647,78490422,78490619,78493909,78494142,78497126,78498033	78438356,78439881,78463087,78465388,78466489,78470601,78471924,78473381,78476359,78478397,78483434,78484920,78485840,78487817,78488336,78488771,78490526,78490761,78494056,78494264,78497311,78501456	Gene ID= ENSG00000136381.12 TPM= 19.85 Transcript Type= protein_coding
chr15	78507564	78537372	78507564	78537372	+	ENST00000408962.6@HYKK	ENST00000408962.6	protein_coding	78507564,78513084,78514968,78527380,78537300	78507671,78513425,78515107,78527563,78537372	Gene ID= ENSG00000188266.13 TPM= 1.17 Transcript Type= protein_coding
chr15	78540413	78552419	78540413	78552419	+	ENST00000044462.11@PSMA4	ENST00000044462.11	protein_coding	78540413,78541905,78542177,78542483,78544190,78544869,78545634,78546575,78548790	78540539,78541930,78542219,78542645,78544267,78544957,78545764,78546698,78552419	Gene ID= ENSG00000041357.15 TPM= 47.87 Transcript Type= protein_coding
chr15	78540421	78549186	78540421	78549186	+	ENST00000559082.5@PSMA4	ENST00000559082.5	protein_coding	78540421,78541905,78542177,78542483,78544190,78544869,78545634,78546575,78548790	78540463,78541930,78542219,78542645,78544267,78544957,78545764,78546698,78549186	Gene ID= ENSG00000041357.15 TPM= 2.34 Transcript Type= protein_coding
chr15	78759203	78764713	78759203	78764713	-	transcript3637.chr15.nic@ADAMTS7	transcript3637.chr15.nic	protein_coding	78763926,78763699,78762403,78759203	78764713,78763845,78762565,78759578	Gene ID= ENSG00000136378.14 TPM= 3.5 Transcript Type= NA
chr15	78759207	78762834	78759207	78762834	-	transcript3638.chr15.nnic@NA	transcript3638.chr15.nnic	NA	78759207	78762834	Gene ID= novel_gene_chr15_3639 TPM= 2.34 Transcript Type= NA
chr15	78872776	78897733	78872776	78897733	+	ENST00000426013.6@MORF4L1	ENST00000426013.6	protein_coding	78872776,78878213,78880512,78886141,78887269,78890989,78891484,78892212,78893539,78894058,78894820,78896983	78873057,78878259,78880579,78886227,78887349,78891014,78891572,78892313,78893627,78894230,78894904,78897733	Gene ID= ENSG00000185787.14 TPM= 310 Transcript Type= protein_coding
chr15	78883113	78884980	78883113	78884980	-	transcript3651.chr15.nnic@NA	transcript3651.chr15.nnic	NA	78883113	78884980	Gene ID= novel_gene_chr15_3652 TPM= 2.34 Transcript Type= NA
chr15	78921769	78945062	78921769	78945062	-	transcript3667.chr15.nic@CTSH	transcript3667.chr15.nic	protein_coding	78944891,78939140,78937686,78937318,78935680,78934978,78932372,78931451,78929412,78927713,78925334,78922993,78921769	78945062,78939171,78937823,78937423,78935750,78935082,78932458,78931506,78929493,78927781,78925440,78923118,78922205	Gene ID= ENSG00000103811.15 TPM= 30.02 Transcript Type= NA
chr15	78921769	78945119	78921769	78945119	-	transcript3681.chr15.nic@CTSH	transcript3681.chr15.nic	protein_coding	78944778,78939140,78937318,78935680,78934978,78932372,78931451,78929412,78927713,78925334,78922993,78921769	78945119,78939171,78937423,78935750,78935082,78932458,78931506,78929493,78927781,78925440,78923118,78922205	Gene ID= ENSG00000103811.15 TPM= 32.35 Transcript Type= NA
chr15	78921769	78945051	78921769	78945051	-	transcript3688.chr15.nic@CTSH	transcript3688.chr15.nic	protein_coding	78944891,78939140,78937318,78935680,78934978,78932372,78931451,78929412,78927713,78925334,78922993,78921769	78945051,78939171,78937423,78935750,78935082,78932458,78932041,78929493,78927781,78925440,78923118,78922205	Gene ID= ENSG00000103811.15 TPM= 26.75 Transcript Type= NA
chr15	78921775	78945046	78921775	78945046	-	ENST00000533777.5@CTSH	ENST00000533777.5	protein_coding	78944891,78939140,78937686,78937318,78935680,78934978,78932372,78931451,78929412,78927713,78925334,78922993,78921775	78945046,78939171,78937823,78937423,78935750,78935082,78932458,78932041,78929493,78927781,78925440,78923118,78922205	Gene ID= ENSG00000103811.15 TPM= 7.74 Transcript Type= nonsense_mediated_decay
chr15	78921748	78924068	78921748	78924068	-	transcript3719.chr15.nnic@NA	transcript3719.chr15.nnic	NA	78921748	78924068	Gene ID= novel_gene_chr15_3720 TPM= 8.17 Transcript Type= NA
chr15	78962012	78998316	78962012	78998316	-	transcript3722.chr15.nic@RASGRF1	transcript3722.chr15.nic	protein_coding	78997951,78995740,78991691,78990189,78985007,78980620,78973303,78971866,78962012	78998316,78995800,78991794,78990273,78985204,78980699,78973420,78971934,78962236	Gene ID= ENSG00000058335.15 TPM= 3.5 Transcript Type= NA
chr15	78962012	78998275	78962012	78998275	-	transcript3723.chr15.nic@RASGRF1	transcript3723.chr15.nic	protein_coding	78998096,78995740,78991691,78990189,78985007,78980620,78973303,78971866,78962012	78998275,78995800,78991794,78990273,78985204,78980699,78973420,78971934,78962236	Gene ID= ENSG00000058335.15 TPM= 4.67 Transcript Type= NA
chr15	78980146	78998275	78980146	78998275	-	transcript3734.chr15.nic@RASGRF1	transcript3734.chr15.nic	protein_coding	78998096,78995740,78991691,78990189,78980146	78998275,78995800,78991794,78990273,78985204	Gene ID= ENSG00000058335.15 TPM= 4.67 Transcript Type= NA
chr15	78984761	78998316	78984761	78998316	-	transcript3738.chr15.nic@RASGRF1	transcript3738.chr15.nic	protein_coding	78997951,78995740,78991691,78990189,78984761	78998316,78995800,78991794,78990273,78985204	Gene ID= ENSG00000058335.15 TPM= 2.92 Transcript Type= NA
chr15	78964692	78966447	78964692	78966447	-	transcript3749.chr15.nnic@NA	transcript3749.chr15.nnic	NA	78964692	78966447	Gene ID= novel_gene_chr15_3750 TPM= 2.34 Transcript Type= NA
chr15	79311062	79322847	79311062	79322847	+	ENST00000299705.9@TMED3	ENST00000299705.9	protein_coding	79311062,79313757,79321978	79311417,79314005,79322847	Gene ID= ENSG00000166557.12 TPM= 96.91 Transcript Type= protein_coding
chr15	79844976	79897050	79844976	79897050	-	transcript3759.chr15.nic@MTHFS	transcript3759.chr15.nic	protein_coding	79896791,79889093,79844976	79897050,79889354,79845442	Gene ID= ENSG00000136371.10 TPM= 5.84 Transcript Type= NA
chr15	79844976	79897049	79844976	79897049	-	ENST00000258874.3@MTHFS	ENST00000258874.3	protein_coding	79896872,79889093,79844976	79897049,79889354,79845442	Gene ID= ENSG00000136371.10 TPM= 12.84 Transcript Type= protein_coding
chr15	79894961	79897012	79894961	79897012	-	transcript3774.chr15.nnic@NA	transcript3774.chr15.nnic	NA	79894961	79897012	Gene ID= novel_gene_chr15_3775 TPM= 2.34 Transcript Type= NA
chr15	79898840	79923755	79898840	79923755	-	transcript3764.chr15.nnic@ST20	transcript3764.chr15.nnic	protein_coding	79923452,79907629,79898840	79923755,79907706,79899125	Gene ID= ENSG00000180953.11 TPM= 2.34 Transcript Type= NA
chr15	79898904	79923702	79898904	79923702	-	ENST00000485386.1@ST20	ENST00000485386.1	protein_coding	79923452,79907629,79898904	79923702,79907684,79899125	Gene ID= ENSG00000180953.11 TPM= 2.34 Transcript Type= protein_coding
chr15	79916362	79921313	79916362	79921313	+	transcript3768.chr15.nnic@NA	transcript3768.chr15.nnic	NA	79916362	79921313	Gene ID= novel_gene_chr15_3769 TPM= 7.59 Transcript Type= NA
chr15	79920276	79923762	79920276	79923762	-	transcript3772.chr15.nnic@NA	transcript3772.chr15.nnic	NA	79920276	79923762	Gene ID= novel_gene_chr15_3773 TPM= 18.1 Transcript Type= NA
chr15	79923167	79924852	79923167	79924852	+	transcript3770.chr15.nnic@NA	transcript3770.chr15.nnic	NA	79923167	79924852	Gene ID= novel_gene_chr15_3771 TPM= 4.67 Transcript Type= NA
chr15	79960889	79971446	79960889	79971446	-	ENST00000267953.3@BCL2A1	ENST00000267953.3	protein_coding	79970700,79960889	79971446,79961174	Gene ID= ENSG00000140379.7 TPM= 42.03 Transcript Type= protein_coding
chr15	79960892	79971169	79960892	79971169	-	ENST00000335661.6@BCL2A1	ENST00000335661.6	protein_coding	79970700,79967637,79960892	79971169,79967692,79961174	Gene ID= ENSG00000140379.7 TPM= 1.17 Transcript Type= protein_coding
chr15	80059568	80138393	80059568	80138393	+	ENST00000261749.10@ZFAND6	ENST00000261749.10	protein_coding	80059568,80098416,80120328,80121712,80122700,80131180,80137480	80059809,80098578,80120498,80121820,80122800,80131293,80138393	Gene ID= ENSG00000086666.18 TPM= 23.81 Transcript Type= protein_coding
chr15	80059933	80138379	80059933	80138379	+	transcript3785.chr15.nnic@ZFAND6	transcript3785.chr15.nnic	protein_coding	80059933,80098416,80120328,80121712,80122700,80131180,80137480	80059963,80098578,80120498,80121820,80122800,80131293,80138379	Gene ID= ENSG00000086666.18 TPM= 10.19 Transcript Type= NA
chr15	80059637	80138379	80059637	80138379	+	transcript3789.chr15.nic@ZFAND6	transcript3789.chr15.nic	protein_coding	80059637,80120328,80121748,80122700,80131180,80137480	80059809,80120498,80121820,80122800,80131293,80138379	Gene ID= ENSG00000086666.18 TPM= 4.83 Transcript Type= NA
chr15	80059919	80138379	80059919	80138379	+	transcript3790.chr15.nnic@ZFAND6	transcript3790.chr15.nnic	protein_coding	80059919,80120328,80121712,80122700,80131180,80137480	80059963,80120498,80121820,80122800,80131293,80138379	Gene ID= ENSG00000086666.18 TPM= 7.27 Transcript Type= NA
chr15	80059714	80138360	80059714	80138360	+	ENST00000558494.5@ZFAND6	ENST00000558494.5	protein_coding	80059714,80120328,80121712,80122700,80131180,80137480	80059809,80120498,80121820,80122800,80131293,80138360	Gene ID= ENSG00000086666.18 TPM= 69.05 Transcript Type= protein_coding
chr15	80072583	80138358	80072583	80138358	+	ENST00000559775.5@ZFAND6	ENST00000559775.5	protein_coding	80072583,80098416,80120328,80121712,80122700,80131180,80137480	80072647,80098578,80120498,80121820,80122800,80131293,80138358	Gene ID= ENSG00000086666.18 TPM= 1.33 Transcript Type= protein_coding
chr15	80072578	80138360	80072578	80138360	+	ENST00000559835.5@ZFAND6	ENST00000559835.5	protein_coding	80072578,80120328,80121712,80122700,80131180,80137480	80072647,80120498,80121820,80122800,80131293,80138360	Gene ID= ENSG00000086666.18 TPM= 1.33 Transcript Type= protein_coding
chr15	80152897	80186340	80152897	80186340	+	ENST00000561421.5@FAH	ENST00000561421.5	protein_coding	80152897,80158060,80159756,80160410,80162246,80168052,80168264,80172149,80173014,80175016,80177537,80180124,80181042,80186130	80153135,80158170,80159877,80160459,80162336,80168149,80168316,80172248,80173144,80175091,80177583,80180225,80181159,80186340	Gene ID= ENSG00000103876.11 TPM= 10.51 Transcript Type= protein_coding
chr15	80195484	80252213	80195484	80252213	-	ENST00000560778.2@CTXND1	ENST00000560778.2	protein_coding	80252007,80203589,80195484	80252213,80203740,80202014	Gene ID= ENSG00000259417.2 TPM= 3.5 Transcript Type= protein_coding
chr15	80404351	80597937	80404351	80597937	+	ENST00000303329.8@ARNT2	ENST00000303329.8	protein_coding	80404351,80450880,80457929,80470218,80475010,80508156,80513911,80514320,80551199,80552640,80555065,80563088,80574148,80574987,80576866,80580411,80581239,80591568,80593600	80404546,80450994,80457976,80470431,80475223,80508258,80513976,80514405,80551275,80552774,80555139,80563239,80574220,80575110,80576965,80580549,80581404,80591704,80597937	Gene ID= ENSG00000172379.20 TPM= 31.53 Transcript Type= protein_coding
chr15	80695303	80755621	80695303	80755621	+	ENST00000258884.4@ABHD17C	ENST00000258884.4	protein_coding	80695303,80749513,80754151	80696019,80749692,80755621	Gene ID= ENSG00000136379.11 TPM= 152.95 Transcript Type= protein_coding
chr15	80699612	80704571	80699612	80704571	+	transcript3821.chr15.nnic@NA	transcript3821.chr15.nnic	NA	80699612	80704571	Gene ID= novel_gene_chr15_3822 TPM= 3.5 Transcript Type= NA
chr15	80779343	80951776	80779343	80951776	+	ENST00000220244.7@CEMIP	ENST00000220244.7	protein_coding	80779343,80873864,80878721,80879716,80880900,80884175,80887694,80888701,80889471,80894990,80895869,80906663,80909097,80920094,80921032,80922009,80924621,80925624,80928902,80929019,80931859,80933245,80936674,80937794,80941849,80942251,80942945,80946965,80948797	80779614,80873973,80878867,80879854,80881136,80884354,80887764,80888796,80889592,80895122,80896060,80906838,80909306,80920299,80921101,80922137,80924706,80925755,80928937,80929174,80932039,80933460,80936885,80937979,80942053,80942337,80943102,80947065,80951776	Gene ID= ENSG00000103888.16 TPM= 16.35 Transcript Type= protein_coding
chr15	80978964	80989873	80978964	80989873	-	transcript3829.chr15.nnic@MESD	transcript3829.chr15.nnic	protein_coding	80989579,80981950,80981638,80978964	80989873,80982182,80981827,80979477	Gene ID= ENSG00000117899.10 TPM= 5.84 Transcript Type= NA
chr15	80975747	80989878	80975747	80989878	-	ENST00000261758.5@MESD	ENST00000261758.5	protein_coding	80989579,80981950,80975747	80989878,80982182,80979477	Gene ID= ENSG00000117899.10 TPM= 8.17 Transcript Type= protein_coding
chr15	80999011	81001801	80999011	81001801	-	transcript3840.chr15.nnic@NA	transcript3840.chr15.nnic	NA	80999011	81001801	Gene ID= novel_gene_chr15_3841 TPM= 14.01 Transcript Type= NA
chr15	81000944	81005788	81000944	81005788	+	ENST00000267984.3@TLNRD1	ENST00000267984.3	protein_coding	81000944	81005788	Gene ID= ENSG00000140406.3 TPM= 12.84 Transcript Type= protein_coding
chr15	81296913	81309083	81296913	81309083	+	ENST00000394652.6@IL16	ENST00000394652.6	protein_coding	81296913,81299380,81301344,81303549,81305908,81306420,81308605	81297078,81300475,81301512,81303650,81306166,81306545,81309083	Gene ID= ENSG00000172349.17 TPM= 29.19 Transcript Type= protein_coding
chr15	81312667	81324141	81312667	81324141	-	ENST00000560723.5@STARD5	ENST00000560723.5	protein_coding	81322408,81319339,81318409,81312667	81324141,81319456,81318502,81313403	Gene ID= ENSG00000172345.13 TPM= 1.17 Transcript Type= retained_intron
chr15	82130230	82262763	82130230	82262763	-	ENST00000268206.11@EFL1	ENST00000268206.11	protein_coding	82262614,82261688,82259088,82252691,82241270,82240418,82238307,82230848,82229034,82228191,82227450,82225165,82220078,82219652,82214717,82163853,82157713,82151465,82138658,82130230	82262763,82261797,82259155,82252775,82241403,82240555,82238521,82230971,82229110,82228327,82227572,82225264,82220229,82219818,82214855,82163984,82157860,82152423,82138842,82130561	Gene ID= ENSG00000140598.13 TPM= 42.03 Transcript Type= protein_coding
chr15	82398636	82402279	82398636	82402279	-	transcript3872.chr15.nnic@NA	transcript3872.chr15.nnic	NA	82398636	82402279	Gene ID= novel_gene_chr15_3873 TPM= 3.5 Transcript Type= NA
chr15	82430045	82439153	82430045	82439153	+	ENST00000618706.1@GOLGA6L9	ENST00000618706.1	protein_coding	82430045,82433562,82434034,82434869,82435967,82436279	82432897,82433649,82434602,82434929,82436069,82439153	Gene ID= ENSG00000197978.9 TPM= 2.34 Transcript Type= retained_intron
chr15	82536753	82540564	82536753	82540564	-	ENST00000330244.10@RPS17	ENST00000330244.10	protein_coding	82540426,82539981,82538880,82538306,82536753	82540564,82540132,82538985,82538371,82536881	Gene ID= ENSG00000182774.10 TPM= 294.82 Transcript Type= protein_coding
chr15	82536755	82540457	82536755	82540457	-	ENST00000560229.5@RPS17	ENST00000560229.5	protein_coding	82539981,82538880,82538306,82536755	82540457,82538985,82538371,82536881	Gene ID= ENSG00000182774.10 TPM= 47.29 Transcript Type= retained_intron
chr15	82659281	82709914	82659281	82709914	-	ENST00000261722.7@AP3B2	ENST00000261722.7	protein_coding	82709594,82689378,82689158,82688736,82681420,82681112,82680837,82680472,82680175,82679729,82678105,82677671,82677274,82676461,82666747,82665457,82664835,82664367,82663801,82663560,82663127,82662694,82662168,82661825,82659845,82659281	82709914,82689453,82689232,82688831,82681580,82681178,82681019,82680755,82680229,82679800,82678167,82677803,82677383,82676637,82666933,82665575,82664943,82664490,82663975,82663620,82663233,82662922,82662252,82661922,82659983,82659710	Gene ID= ENSG00000103723.12 TPM= 1.17 Transcript Type= protein_coding
chr15	82750566	82755037	82750566	82755037	+	ENST00000558687.1@SNHG21	ENST00000558687.1	antisense_RNA	82750566,82754629	82750714,82755037	Gene ID= ENSG00000250988.7 TPM= 1.17 Transcript Type= antisense_RNA
chr15	82809603	82834670	82809603	82834670	+	transcript3890.chr15.nnic@WHAMM	transcript3890.chr15.nnic	protein_coding	82809603,82813103,82816692,82817920,82819323,82821711,82823100,82826410,82826751,82830599,82833229	82810335,82813276,82816842,82818089,82819488,82821839,82823287,82826496,82826846,82831079,82834670	Gene ID= ENSG00000156232.7 TPM= 3.5 Transcript Type= NA
chr15	82809603	82826496	82809603	82826496	+	transcript3899.chr15.nic@WHAMM	transcript3899.chr15.nic	protein_coding	82809603,82813103,82816692,82817920,82819323,82823100,82826410	82810335,82813276,82816842,82818089,82819488,82823287,82826496	Gene ID= ENSG00000156232.7 TPM= 2.34 Transcript Type= NA
chr15	82848983	82952728	82848983	82952728	-	ENST00000304231.12@HOMER2	ENST00000304231.12	protein_coding	82952531,82892685,82875273,82864167,82859029,82854644,82852142,82851151,82848983	82952728,82892841,82875404,82864259,82859168,82854800,82852252,82851231,82849903	Gene ID= ENSG00000103942.12 TPM= 1.75 Transcript Type= protein_coding
chr15	82848983	82952721	82848983	82952721	-	ENST00000450735.6@HOMER2	ENST00000450735.6	protein_coding	82952531,82892685,82875273,82864167,82859029,82854644,82852142,82851151,82848983	82952721,82892841,82875404,82864259,82859135,82854800,82852252,82851231,82849903	Gene ID= ENSG00000103942.12 TPM= 15.76 Transcript Type= protein_coding
chr15	82986207	82991057	82986207	82991057	+	ENST00000304191.3@FAM103A1	ENST00000304191.3	protein_coding	82986207,82987336,82989010,82989881	82986369,82987384,82989188,82991057	Gene ID= ENSG00000169612.3 TPM= 11.68 Transcript Type= protein_coding
chr15	83004686	83011585	83004686	83011585	-	ENST00000508990.2@C15orf40	ENST00000508990.2	protein_coding	83011497,83010237,83008548,83004686	83011585,83010363,83008675,83004972	Gene ID= ENSG00000169609.13 TPM= 2.34 Transcript Type= protein_coding
chr15	83016422	83067252	83016422	83067252	-	transcript3923.chr15.nic@BTBD1	transcript3923.chr15.nic	protein_coding	83066751,83056389,83050073,83041728,83030136,83028616,83020675,83018707,83016422	83067252,83056545,83050178,83041925,83030328,83028728,83020762,83018853,83018225	Gene ID= ENSG00000064726.9 TPM= 4.67 Transcript Type= NA
chr15	83016422	83067246	83016422	83067246	-	transcript3924.chr15.nic@BTBD1	transcript3924.chr15.nic	protein_coding	83066751,83056389,83041728,83030136,83028616,83020675,83018707,83016422	83067246,83056545,83041925,83030328,83028728,83020762,83018853,83018225	Gene ID= ENSG00000064726.9 TPM= 4.67 Transcript Type= NA
chr15	83016422	83067252	83016422	83067252	-	transcript3926.chr15.nic@BTBD1	transcript3926.chr15.nic	protein_coding	83066751,83056389,83041728,83030136,83020675,83018707,83016422	83067252,83056545,83041925,83030328,83020762,83018853,83018225	Gene ID= ENSG00000064726.9 TPM= 3.5 Transcript Type= NA
chr15	83016422	83067354	83016422	83067354	-	ENST00000261721.8@BTBD1	ENST00000261721.8	protein_coding	83066751,83056389,83050073,83041728,83030136,83020675,83018707,83016422	83067354,83056545,83050178,83041925,83030328,83020762,83018853,83018225	Gene ID= ENSG00000064726.9 TPM= 143.61 Transcript Type= protein_coding
chr15	83107475	83144854	83107475	83144854	+	transcript3941.chr15.nic@TM6SF1	transcript3941.chr15.nic	protein_coding	83107475,83112797,83115845,83119578,83121921,83122757,83124672,83126755,83127358,83144522	83107772,83112900,83115942,83119681,83122003,83122878,83124776,83126847,83127477,83144854	Gene ID= ENSG00000136404.15 TPM= 2.34 Transcript Type= NA
chr15	83107396	83137359	83107396	83137359	+	transcript3948.chr15.nnic@TM6SF1	transcript3948.chr15.nnic	protein_coding	83107396,83112797,83115845,83119578,83121921,83124672,83126755,83127358,83136481	83107772,83112900,83115942,83119681,83122003,83124776,83126847,83127477,83137359	Gene ID= ENSG00000136404.15 TPM= 4.09 Transcript Type= NA
chr15	83107407	83137359	83107407	83137359	+	ENST00000322019.13@TM6SF1	ENST00000322019.13	protein_coding	83107407,83112797,83115845,83119578,83121921,83122757,83124672,83126755,83127358,83136481	83107772,83112900,83115942,83119681,83122003,83122878,83124776,83126847,83127477,83137359	Gene ID= ENSG00000136404.15 TPM= 39.11 Transcript Type= protein_coding
chr15	83121239	83125009	83121239	83125009	-	transcript3968.chr15.nnic@NA	transcript3968.chr15.nnic	NA	83121239	83125009	Gene ID= novel_gene_chr15_3969 TPM= 4.67 Transcript Type= NA
chr15	83203795	83207887	83203795	83207887	-	transcript3972.chr15.nnic@NA	transcript3972.chr15.nnic	NA	83203795	83207887	Gene ID= novel_gene_chr15_3973 TPM= 3.5 Transcript Type= NA
chr15	83255903	83284714	83255903	83284714	-	ENST00000345382.6@BNC1	ENST00000345382.6	protein_coding	83284530,83268133,83266836,83262951,83255903	83284714,83268232,83267071,83264815,83258126	Gene ID= ENSG00000169594.13 TPM= 7.01 Transcript Type= protein_coding
chr15	83279901	83284112	83279901	83284112	+	transcript3976.chr15.nnic@NA	transcript3976.chr15.nnic	NA	83279901	83284112	Gene ID= novel_gene_chr15_3977 TPM= 2.34 Transcript Type= NA
chr15	83447228	83618743	83447228	83618743	+	ENST00000427482.6@SH3GL3	ENST00000427482.6	protein_coding	83447228,83559253,83565134,83568529,83572565,83576583,83586983,83588662,83618082	83447578,83559321,83565206,83568672,83572698,83576741,83587086,83588771,83618743	Gene ID= ENSG00000140600.16 TPM= 8.17 Transcript Type= protein_coding
chr15	83653924	83962412	83653924	83962412	+	transcript3983.chr15.nnic@ADAMTSL3	transcript3983.chr15.nnic	protein_coding	83653924,83655729,83704389,83773523,83804650,83838089,83849642,83858766,83870802,83885101,83890109,83891329,83892684,83897858,83899647,83913092,83923904,83942596,83942903,83961573	83654276,83655830,83704508,83773650,83804695,83838215,83849722,83858840,83870959,83885212,83890247,83891379,83892888,83898005,83899731,83913378,83924033,83942788,83943082,83962412	Gene ID= ENSG00000156218.12 TPM= 2.34 Transcript Type= NA
chr15	83653842	83898004	83653842	83898004	+	transcript3985.chr15.nic@ADAMTSL3	transcript3985.chr15.nic	protein_coding	83653842,83655729,83704389,83773523,83804650,83819811,83838089,83858766,83870802,83885101,83890109,83891329,83892684,83897858	83654276,83655830,83704508,83773650,83804695,83820047,83838215,83858840,83870959,83885212,83890247,83891379,83892888,83898004	Gene ID= ENSG00000156218.12 TPM= 4.67 Transcript Type= NA
chr15	84570251	84580175	84570251	84580175	+	transcript3997.chr15.nic@LINC00933	transcript3997.chr15.nic	transcribed_unprocessed_pseudogene	84570251,84572215,84573022,84577948	84570734,84572344,84573251,84580175	Gene ID= ENSG00000259728.5 TPM= 2.34 Transcript Type= NA
chr15	84601005	84623716	84601005	84623716	+	ENST00000448803.6@ZSCAN2	ENST00000448803.6	protein_coding	84601005,84603820,84620602	84601188,84604333,84623716	Gene ID= ENSG00000176371.13 TPM= 4.67 Transcript Type= protein_coding
chr15	84601050	84622394	84601050	84622394	+	ENST00000327179.6@ZSCAN2	ENST00000327179.6	protein_coding	84601050,84603820,84620602	84601135,84604330,84622394	Gene ID= ENSG00000176371.13 TPM= 1.17 Transcript Type= protein_coding
chr15	84639281	84654335	84639281	84654335	-	ENST00000434634.6@WDR73	ENST00000434634.6	protein_coding	84654234,84653632,84652714,84648537,84647890,84646184,84645471,84639281	84654335,84653699,84652802,84648625,84647954,84646348,84645836,84643723	Gene ID= ENSG00000177082.12 TPM= 5.84 Transcript Type= protein_coding
chr15	84643082	84654310	84643082	84654310	-	transcript4008.chr15.nic@WDR73	transcript4008.chr15.nic	protein_coding	84654234,84653632,84652714,84648537,84647890,84645471,84643082	84654310,84653699,84652802,84648625,84647954,84646348,84643723	Gene ID= ENSG00000177082.12 TPM= 4.67 Transcript Type= NA
chr15	84642768	84654343	84642768	84654343	-	ENST00000398528.7@WDR73	ENST00000398528.7	protein_coding	84654227,84653632,84652714,84648537,84647890,84646184,84645471,84642768	84654343,84653699,84652802,84648625,84647954,84646348,84645836,84643723	Gene ID= ENSG00000177082.12 TPM= 3.5 Transcript Type= processed_transcript
chr15	84655129	84658563	84655129	84658563	-	ENST00000394588.3@NMB	ENST00000394588.3	protein_coding	84657996,84657176,84655129	84658563,84657348,84655404	Gene ID= ENSG00000197696.9 TPM= 2.34 Transcript Type= protein_coding
chr15	84655129	84658548	84655129	84658548	-	ENST00000360476.7@NMB	ENST00000360476.7	protein_coding	84657996,84657176,84655129	84658548,84657348,84655409	Gene ID= ENSG00000197696.9 TPM= 7.01 Transcript Type= protein_coding
chr15	84669544	84716716	84669544	84716716	-	ENST00000268220.11@SEC11A	ENST00000268220.11	protein_coding	84716025,84691535,84687625,84680713,84670725,84669544	84716716,84691644,84687774,84680832,84670782,84670069	Gene ID= ENSG00000140612.13 TPM= 82.9 Transcript Type= protein_coding
chr15	84748635	84806432	84748635	84806432	+	ENST00000560079.6@ZNF592	ENST00000560079.6	protein_coding	84748635,84764707,84778183,84782657,84790705,84797869,84798315,84798588,84799098,84799842,84801863	84748664,84764815,84778312,84784895,84790883,84798045,84798474,84798875,84799210,84799977,84806432	Gene ID= ENSG00000166716.9 TPM= 9.34 Transcript Type= protein_coding
chr15	84800396	84803295	84800396	84803295	+	transcript4046.chr15.nnic@NA	transcript4046.chr15.nnic	NA	84800396	84803295	Gene ID= novel_gene_chr15_4047 TPM= 7.01 Transcript Type= NA
chr15	84981448	85139142	84981448	85139142	+	transcript4055.chr15.nnic@PDE8A	transcript4055.chr15.nnic	protein_coding	84981448,85064370,85067014,85075862,85076733,85083556,85089338,85091044,85097948,85100015,85100156,85109053,85113377,85113873,85115439,85115984,85117641,85120474,85120797,85123061,85126207,85136534,85137797	84982348,85064426,85067204,85075918,85076787,85083644,85089416,85091181,85098036,85100066,85100198,85109130,85113447,85114037,85115487,85116119,85117839,85120583,85121014,85123193,85126374,85136663,85139142	Gene ID= ENSG00000073417.14 TPM= 5.17 Transcript Type= NA
chr15	84981692	85138427	84981692	85138427	+	transcript4056.chr15.nnic@PDE8A	transcript4056.chr15.nnic	protein_coding	84981692,84995340,85064370,85067014,85075862,85076733,85083556,85089338,85091044,85097948,85100015,85100156,85109053,85113377,85113873,85115439,85115984,85117641,85120797,85123061,85126207,85136534,85137797	84982348,84995460,85064426,85067204,85075918,85076787,85083644,85089416,85091181,85098036,85100066,85100198,85109130,85113447,85114037,85115487,85116119,85117839,85121014,85123193,85126374,85136663,85138427	Gene ID= ENSG00000073417.14 TPM= 2.34 Transcript Type= NA
chr15	84981895	85139142	84981895	85139142	+	transcript4057.chr15.nnic@PDE8A	transcript4057.chr15.nnic	protein_coding	84981895,85054304,85064370,85067014,85075862,85076733,85083556,85089338,85091044,85097948,85100015,85100156,85109053,85113377,85113873,85115439,85115984,85117641,85120797,85123061,85126207,85136534,85137797	84982348,85054444,85064426,85067204,85075918,85076787,85083644,85089416,85091181,85098036,85100066,85100198,85109130,85113447,85114037,85115487,85116119,85117839,85121014,85123193,85126374,85136663,85139142	Gene ID= ENSG00000073417.14 TPM= 3.33 Transcript Type= NA
chr15	84981448	85139142	84981448	85139142	+	transcript4074.chr15.nic@PDE8A	transcript4074.chr15.nic	protein_coding	84981448,85064370,85067014,85083556,85089338,85091044,85097948,85100015,85100156,85109053,85113377,85113873,85115439,85115984,85117641,85120797,85123061,85126207,85136534,85137797	84982348,85064426,85067204,85083644,85089416,85091181,85098036,85100066,85100198,85109130,85113447,85114037,85115487,85116119,85117839,85121014,85123193,85126374,85136663,85139142	Gene ID= ENSG00000073417.14 TPM= 6.05 Transcript Type= NA
chr15	84981448	85139142	84981448	85139142	+	transcript4075.chr15.nic@PDE8A	transcript4075.chr15.nic	protein_coding	84981448,85064370,85067014,85083556,85089338,85097948,85100015,85100156,85109053,85113377,85113873,85115439,85115984,85117641,85120797,85123061,85126207,85136534,85137797	84982348,85064426,85067204,85083644,85089416,85098036,85100066,85100198,85109130,85113447,85114037,85115487,85116119,85117839,85121014,85123193,85126374,85136663,85139142	Gene ID= ENSG00000073417.14 TPM= 6.05 Transcript Type= NA
chr15	84981974	85139136	84981974	85139136	+	ENST00000394553.5@PDE8A	ENST00000394553.5	protein_coding	84981974,85064370,85067014,85075862,85076733,85083556,85089338,85091044,85097948,85100015,85100156,85109053,85113377,85113873,85115439,85115984,85117641,85120797,85123061,85126207,85136534,85137797	84982348,85064426,85067204,85075918,85076787,85083644,85089416,85091181,85098036,85100066,85100198,85109130,85113447,85114037,85115487,85116119,85117839,85121014,85123193,85126374,85136663,85139136	Gene ID= ENSG00000073417.14 TPM= 6.25 Transcript Type= protein_coding
chr15	85091903	85096537	85091903	85096537	-	transcript4084.chr15.nnic@NA	transcript4084.chr15.nnic	NA	85091903	85096537	Gene ID= novel_gene_chr15_4085 TPM= 79.4 Transcript Type= NA
chr15	85544064	85743773	85544064	85743773	+	transcript4090.chr15.nic@AKAP13	transcript4090.chr15.nic	protein_coding	85544064,85575131,85578930,85585702,85639374,85645818,85655417,85658537,85664563,85669722,85682158,85684741,85693277,85708019,85710579,85715788,85717290,85718013,85719076,85721991,85722230,85723072,85726410,85727066,85727381,85730513,85734992,85735560,85736090,85740222,85741046,85743492	85544143,85575329,85582107,85585823,85639449,85645954,85655787,85658590,85664755,85669830,85682212,85684873,85693451,85708086,85710645,85715923,85717402,85718159,85719326,85722116,85722347,85723320,85726486,85727247,85727463,85730707,85735150,85735630,85736134,85740272,85741495,85743773	Gene ID= ENSG00000170776.21 TPM= 8.75 Transcript Type= NA
chr15	85380571	85684874	85380571	85684874	+	transcript4099.chr15.nic@AKAP13	transcript4099.chr15.nic	protein_coding	85380571,85485710,85521428,85533584,85543772,85575131,85578930,85585702,85639374,85645818,85655417,85658537,85662388,85664563,85669722,85682158,85684741	85380798,85485753,85521575,85533880,85543955,85575329,85582107,85585823,85639449,85645954,85655787,85658590,85662453,85664755,85669830,85682212,85684874	Gene ID= ENSG00000170776.21 TPM= 10.89 Transcript Type= NA
chr15	85380571	85684874	85380571	85684874	+	transcript4100.chr15.nic@AKAP13	transcript4100.chr15.nic	protein_coding	85380571,85485710,85521428,85533584,85543772,85575131,85578930,85585702,85639374,85645818,85655417,85658537,85664563,85669722,85682158,85684741	85380798,85485753,85521575,85533880,85543955,85575329,85582107,85585823,85639449,85645954,85655787,85658590,85664755,85669830,85682212,85684874	Gene ID= ENSG00000170776.21 TPM= 19.36 Transcript Type= NA
chr15	85544064	85684874	85544064	85684874	+	transcript4107.chr15.nic@AKAP13	transcript4107.chr15.nic	protein_coding	85544064,85575131,85578930,85585702,85639374,85645818,85655417,85658537,85662388,85664563,85669722,85682158,85684741	85544143,85575329,85582107,85585823,85639449,85645954,85655787,85658590,85662453,85664755,85669830,85682212,85684874	Gene ID= ENSG00000170776.21 TPM= 24.6 Transcript Type= NA
chr15	85544064	85684874	85544064	85684874	+	transcript4113.chr15.nic@AKAP13	transcript4113.chr15.nic	protein_coding	85544064,85575131,85578930,85585702,85639374,85645818,85655417,85664563,85669722,85682158,85684741	85544143,85575329,85582107,85585823,85639449,85645954,85655787,85664755,85669830,85682212,85684874	Gene ID= ENSG00000170776.21 TPM= 35.89 Transcript Type= NA
chr15	85544064	85660379	85544064	85660379	+	transcript4116.chr15.nic@AKAP13	transcript4116.chr15.nic	protein_coding	85544064,85575131,85578930,85585702,85639374,85645818,85655417,85658537	85544143,85575329,85582107,85585823,85639449,85645954,85655787,85660379	Gene ID= ENSG00000170776.21 TPM= 12.54 Transcript Type= NA
chr15	85544064	85646441	85544064	85646441	+	transcript4118.chr15.nic@AKAP13	transcript4118.chr15.nic	protein_coding	85544064,85575131,85578930,85585702,85639374,85645818	85544143,85575329,85582107,85585823,85639449,85646441	Gene ID= ENSG00000170776.21 TPM= 6.5 Transcript Type= NA
chr15	85544040	85579184	85544040	85579184	+	ENST00000558166.2@AKAP13	ENST00000558166.2	protein_coding	85544040,85575131,85578930	85544143,85575329,85579184	Gene ID= ENSG00000170776.21 TPM= 1.17 Transcript Type= protein_coding
chr15	85380587	85684874	85380587	85684874	+	ENST00000559362.5@AKAP13	ENST00000559362.5	protein_coding	85380587,85485710,85521428,85533584,85543772,85575131,85578930,85585702,85639374,85645818,85655417,85664563,85669722,85682158,85684741	85380798,85485753,85521575,85533880,85543955,85575329,85582107,85585823,85639449,85645954,85655787,85664755,85669830,85682212,85684874	Gene ID= ENSG00000170776.21 TPM= 15.18 Transcript Type= protein_coding
chr15	85546738	85550072	85546738	85550072	-	transcript4130.chr15.nnic@NA	transcript4130.chr15.nnic	NA	85546738	85550072	Gene ID= novel_gene_chr15_4131 TPM= 4.67 Transcript Type= NA
chr15	85744720	85749156	85744720	85749156	+	transcript4126.chr15.nnic@NA	transcript4126.chr15.nnic	NA	85744720	85749156	Gene ID= novel_gene_chr15_4127 TPM= 11.68 Transcript Type= NA
chr15	85759326	85794925	85759326	85794925	-	transcript4132.chr15.nnic@KLHL25	transcript4132.chr15.nnic	protein_coding	85794766,85768017,85760308,85759326	85794925,85769820,85761011,85760231	Gene ID= ENSG00000183655.12 TPM= 2.92 Transcript Type= NA
chr15	85759323	85795030	85759323	85795030	-	ENST00000337975.5@KLHL25	ENST00000337975.5	protein_coding	85794766,85768017,85759323	85795030,85769820,85761011	Gene ID= ENSG00000183655.12 TPM= 7.59 Transcript Type= protein_coding
chr15	86079624	86296215	86079624	86296215	+	transcript4134.chr15.nic@AGBL1	transcript4134.chr15.nic	protein_coding	86079624,86142004,86143699,86154430,86158933,86224914,86247671,86256853,86257964,86262778,86264258,86266374,86266990,86269919,86271619,86279639,86295255	86080023,86142067,86143845,86154561,86159026,86224951,86247879,86257018,86258031,86262894,86264838,86266457,86267076,86270067,86271706,86279783,86296215	Gene ID= ENSG00000273540.3 TPM= 2.34 Transcript Type= NA
chr15	86827940	86832501	86827940	86832501	-	transcript4136.chr15.nnic@NA	transcript4136.chr15.nnic	NA	86827940	86832501	Gene ID= novel_gene_chr15_4137 TPM= 2.34 Transcript Type= NA
chr15	86849519	86853579	86849519	86853579	-	transcript4138.chr15.nnic@NA	transcript4138.chr15.nnic	NA	86849519	86853579	Gene ID= novel_gene_chr15_4139 TPM= 2.34 Transcript Type= NA
chr15	87977364	88256159	87977364	88256159	-	ENST00000317501.7@NTRK3	ENST00000317501.7	protein_coding	88255906,88184225,88183418,88147335,88137404,88136467,88135899,88135101,88128711,88127162,88126271,88032857,87981226,87977364	88256159,88184299,88183489,88147403,88137561,88136609,88136040,88135397,88128734,88127226,88126373,88033045,87981360,87979463	Gene ID= ENSG00000140538.16 TPM= 1.17 Transcript Type= protein_coding
chr15	88459476	88467419	88459476	88467419	-	ENST00000312475.4@MRPL46	ENST00000312475.4	protein_coding	88467150,88465587,88464703,88459476	88467419,88465773,88464876,88459863	Gene ID= ENSG00000259494.1 TPM= 33.86 Transcript Type= protein_coding
chr15	88467453	88480773	88467453	88480773	+	ENST00000325844.8@MRPS11	ENST00000325844.8	protein_coding	88467453,88467908,88472627,88475110,88476989,88477872	88467782,88468024,88472725,88475239,88477054,88480773	Gene ID= ENSG00000181991.15 TPM= 15.18 Transcript Type= protein_coding
chr15	88512483	88546675	88512483	88546675	-	ENST00000268148.12@DET1	ENST00000268148.12	protein_coding	88546540,88530623,88527599,88516782,88512483	88546675,88531715,88527786,88516973,88513140	Gene ID= ENSG00000140543.14 TPM= 8.17 Transcript Type= protein_coding
chr15	88512483	88546653	88512483	88546653	-	ENST00000564406.5@DET1	ENST00000564406.5	protein_coding	88546540,88536312,88530623,88527599,88516782,88512483	88546653,88536381,88531715,88527786,88516973,88513140	Gene ID= ENSG00000140543.14 TPM= 1.17 Transcript Type= protein_coding
chr15	88621267	88632280	88621267	88632280	+	transcript4158.chr15.nic@AEN	transcript4158.chr15.nic	protein_coding	88621267,88626146,88629226	88621382,88626749,88632280	Gene ID= ENSG00000181026.14 TPM= 4.67 Transcript Type= NA
chr15	88626140	88632281	88626140	88632281	+	transcript4160.chr15.nic@AEN	transcript4160.chr15.nic	protein_coding	88626140,88629226,88630058	88626749,88629426,88632281	Gene ID= ENSG00000181026.14 TPM= 7.01 Transcript Type= NA
chr15	88621296	88632282	88621296	88632282	+	ENST00000332810.3@AEN	ENST00000332810.3	protein_coding	88621296,88626146,88629226,88630058	88621382,88626749,88629426,88632282	Gene ID= ENSG00000181026.14 TPM= 134.27 Transcript Type= protein_coding
chr15	88627461	88630572	88627461	88630572	-	transcript4161.chr15.nnic@NA	transcript4161.chr15.nnic	NA	88627461	88630572	Gene ID= novel_gene_chr15_4162 TPM= 5.84 Transcript Type= NA
chr15	88638743	88656483	88638743	88656483	+	ENST00000306072.9@ISG20	ENST00000306072.9	protein_coding	88638743,88639343,88652110,88655415	88639076,88639594,88652310,88656483	Gene ID= ENSG00000172183.14 TPM= 25.69 Transcript Type= protein_coding
chr15	88877288	88895626	88877288	88895626	-	ENST00000359595.7@HAPLN3	ENST00000359595.7	protein_coding	88895459,88887175,88881357,88878967,88877288	88895626,88887345,88881725,88879269,88878256	Gene ID= ENSG00000140511.11 TPM= 4.67 Transcript Type= protein_coding
chr15	88898714	88913411	88898714	88913411	-	ENST00000268150.12@MFGE8	ENST00000268150.12	protein_coding	88913247,88909792,88907195,88906626,88905757,88901551,88899656,88898714	88913411,88909923,88907376,88906778,88905901,88901735,88899811,88899532	Gene ID= ENSG00000140545.14 TPM= 43.2 Transcript Type= protein_coding
chr15	88898715	88913381	88898715	88913381	-	ENST00000566497.5@MFGE8	ENST00000566497.5	protein_coding	88913247,88909792,88907195,88906626,88905757,88901551,88899656,88899375,88898715	88913381,88909923,88907376,88906778,88905901,88901735,88899811,88899532,88899157	Gene ID= ENSG00000140545.14 TPM= 3.5 Transcript Type= protein_coding
chr15	88898713	88913381	88898713	88913381	-	ENST00000268151.11@MFGE8	ENST00000268151.11	protein_coding	88913247,88909792,88907195,88906626,88905757,88901551,88898713	88913381,88909923,88907376,88906778,88905901,88901735,88899532	Gene ID= ENSG00000140545.14 TPM= 3.5 Transcript Type= protein_coding
chr15	89088150	89202360	89088150	89202360	+	ENST00000352732.9@ABHD2	ENST00000352732.9	protein_coding	89088150,89113725,89116322,89151677,89155367,89175812,89185424,89188193,89191080,89193235,89195227	89088563,89113824,89116521,89151852,89155534,89175995,89185516,89188303,89191149,89193319,89202360	Gene ID= ENSG00000140526.17 TPM= 85.23 Transcript Type= protein_coding
chr15	89121974	89125265	89121974	89125265	+	transcript4182.chr15.nnic@NA	transcript4182.chr15.nnic	NA	89121974	89125265	Gene ID= novel_gene_chr15_4183 TPM= 3.5 Transcript Type= NA
chr15	89243967	89317129	89243967	89317129	+	ENST00000310775.11@FANCI	ENST00000310775.11	protein_coding	89243967,89247629,89258704,89260713,89261585,89261821,89263419,89263903,89264522,89268399,89273377,89274168,89276711,89278687,89281170,89281765,89283136,89285096,89290213,89291613,89292688,89292942,89293833,89294915,89299800,89300300,89301326,89303864,89305115,89305341,89305605,89306007,89307476,89307613,89312904,89314612,89315282,89316397	89244033,89247731,89258776,89260843,89261741,89261878,89263460,89264026,89264607,89268525,89273469,89274304,89276891,89278774,89281300,89281835,89283250,89285218,89290281,89291714,89292864,89293063,89293997,89295094,89299966,89300385,89301442,89303915,89305242,89305409,89305698,89306194,89307529,89307672,89312972,89314707,89315389,89317129	Gene ID= ENSG00000140525.17 TPM= 1.17 Transcript Type= protein_coding
chr15	89316320	89334972	89316320	89334972	-	transcript4188.chr15.nic@POLG	transcript4188.chr15.nic	protein_coding	89334685,89333096,89330081,89328943,89328685,89328456,89327167,89326912,89326612,89325450,89324107,89323815,89323404,89322742,89321962,89321736,89321125,89320766,89319228,89318931,89318541,89317939,89317376,89316320	89334972,89333913,89330276,89329110,89328831,89328535,89327349,89327063,89326738,89325686,89324227,89323901,89323511,89322902,89322015,89321853,89321260,89321012,89319350,89319099,89318749,89318037,89317536,89316827	Gene ID= ENSG00000140521.12 TPM= 8.06 Transcript Type= NA
chr15	89316320	89334861	89316320	89334861	-	ENST00000442287.6@POLG	ENST00000442287.6	protein_coding	89334685,89333096,89330081,89328943,89328685,89328456,89327167,89326912,89326612,89325450,89324107,89323815,89323404,89322742,89321962,89321736,89321125,89320766,89319228,89318931,89318541,89317376,89316320	89334861,89333913,89330276,89329110,89328831,89328535,89327349,89327063,89326738,89325686,89324227,89323901,89323511,89322902,89322015,89321853,89321260,89321012,89319350,89319099,89318749,89317536,89316827	Gene ID= ENSG00000140521.12 TPM= 55.93 Transcript Type= protein_coding
chr15	89316305	89334847	89316305	89334847	-	ENST00000268124.9@POLG	ENST00000268124.9	protein_coding	89334673,89333096,89330081,89328943,89328685,89328456,89327167,89326912,89326612,89325450,89324107,89323815,89323404,89322742,89321962,89321736,89321125,89320766,89319228,89318931,89318541,89317376,89316305	89334847,89333913,89330276,89329110,89328831,89328535,89327349,89327063,89326738,89325686,89324227,89323901,89323511,89322902,89322015,89321853,89321260,89321012,89319350,89319099,89318749,89317536,89316827	Gene ID= ENSG00000140521.12 TPM= 29.07 Transcript Type= protein_coding
chr15	89627977	89655451	89627977	89655451	-	ENST00000394412.7@KIF7	ENST00000394412.7	protein_coding	89655399,89652603,89649741,89648974,89648255,89647596,89646830,89645893,89645336,89645013,89642203,89633686,89633141,89632820,89631495,89630287,89629375,89628976,89627977	89655451,89652954,89649941,89649367,89648774,89647712,89647057,89646026,89645451,89645165,89642405,89633883,89633266,89632996,89631710,89630493,89629573,89629122,89628786	Gene ID= ENSG00000166813.14 TPM= 4.67 Transcript Type= protein_coding
chr15	89681531	89690782	89681531	89690782	-	ENST00000300056.7@PEX11A	ENST00000300056.7	protein_coding	89690577,89686431,89681531	89690782,89686546,89683948	Gene ID= ENSG00000166821.8 TPM= 14.01 Transcript Type= protein_coding
chr15	89690844	89704478	89690844	89704478	+	ENST00000558000.1@WDR93	ENST00000558000.1	protein_coding	89690844,89701707,89702950	89690857,89702049,89704478	Gene ID= ENSG00000140527.14 TPM= 1.17 Transcript Type= protein_coding
chr15	89748661	89751310	89748661	89751310	-	ENST00000300057.4@MESP1	ENST00000300057.4	protein_coding	89750509,89748661	89751310,89750227	Gene ID= ENSG00000166823.5 TPM= 1.17 Transcript Type= protein_coding
chr15	89784889	89814862	89784889	89814862	-	ENST00000300060.6@ANPEP	ENST00000300060.6	protein_coding	89814772,89805970,89805321,89805078,89804491,89804253,89803889,89803647,89803442,89803239,89801435,89801111,89799426,89799260,89797575,89793035,89792452,89792160,89790953,89790460,89784889	89814862,89806806,89805463,89805217,89804617,89804407,89804002,89803790,89803507,89803304,89801607,89801187,89799559,89799315,89797722,89793126,89792562,89792327,89791093,89790541,89785501	Gene ID= ENSG00000166825.13 TPM= 109.75 Transcript Type= protein_coding
chr15	89830603	89894033	89830603	89894033	-	transcript4227.chr15.nnic@AP3S2	transcript4227.chr15.nnic	protein_coding	89893881,89889049,89888521,89877306,89871475,89837615,89832755,89830603	89894033,89889140,89888632,89877424,89871546,89837722,89835643,89832201	Gene ID= ENSG00000157823.16 TPM= 3.5 Transcript Type= NA
chr15	89834308	89894033	89834308	89894033	-	transcript4228.chr15.nic@AP3S2	transcript4228.chr15.nic	protein_coding	89893881,89889049,89888521,89878265,89877306,89871475,89837615,89834308	89894033,89889140,89888632,89878300,89877424,89871546,89837722,89835643	Gene ID= ENSG00000157823.16 TPM= 2.34 Transcript Type= NA
chr15	89830599	89894342	89830599	89894342	-	ENST00000336418.8@AP3S2	ENST00000336418.8	protein_coding	89893881,89889049,89888521,89871475,89837615,89830599	89894342,89889140,89888632,89871546,89837722,89835643	Gene ID= ENSG00000157823.16 TPM= 7.01 Transcript Type= protein_coding
chr15	89834308	89912882	89834308	89912882	-	ENST00000398333.7@C15orf38-AP3S2	ENST00000398333.7	protein_coding	89912744,89910744,89908280,89903777,89903216,89889049,89888521,89871475,89837615,89834308	89912882,89910819,89908412,89903983,89903379,89889140,89888632,89871546,89837722,89835643	Gene ID= ENSG00000250021.7 TPM= 9.34 Transcript Type= protein_coding
chr15	89896597	89897485	89896597	89897485	+	transcript4250.chr15.nnic@NA	transcript4250.chr15.nnic	NA	89896597	89897485	Gene ID= novel_gene_chr15_4251 TPM= 4.67 Transcript Type= NA
chr15	89897757	89899602	89897757	89899602	-	transcript4252.chr15.nnic@NA	transcript4252.chr15.nnic	NA	89897757	89899602	Gene ID= novel_gene_chr15_4253 TPM= 2.34 Transcript Type= NA
chr15	90001392	90082200	90001392	90082200	+	ENST00000268154.8@ZNF710	ENST00000268154.8	protein_coding	90001392,90067110,90073071,90074116,90079660	90001614,90068595,90073262,90074290,90082200	Gene ID= ENSG00000140548.9 TPM= 35.03 Transcript Type= protein_coding
chr15	90074512	90076644	90074512	90076644	-	ENST00000620791.1@ZNF710-AS1	ENST00000620791.1	antisense_RNA	90074512	90076644	Gene ID= ENSG00000259291.2 TPM= 1.17 Transcript Type= antisense_RNA
chr15	90083045	90102504	90083045	90102504	-	ENST00000330062.7@IDH2	ENST00000330062.7	protein_coding	90102276,90091553,90090479,90088587,90088359,90087439,90087112,90085275,90085001,90084816,90083045	90102504,90091644,90090644,90088747,90088502,90087575,90087263,90085387,90085098,90084908,90084353	Gene ID= ENSG00000182054.9 TPM= 16.35 Transcript Type= protein_coding
chr15	90083996	90102468	90083996	90102468	-	ENST00000560061.1@IDH2	ENST00000560061.1	protein_coding	90102276,90088587,90088359,90087439,90087112,90085275,90085001,90084816,90083996	90102468,90088747,90088502,90087575,90087263,90085387,90085098,90084908,90084353	Gene ID= ENSG00000182054.9 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr15	90201319	90229676	90201319	90229676	+	ENST00000411539.6@SEMA4B	ENST00000411539.6	protein_coding	90201319,90217439,90217767,90219793,90220982,90221367,90221614,90223559,90223838,90224968,90225282,90225661,90227557,90227904	90201735,90217602,90217829,90219891,90221093,90221480,90221765,90223740,90223988,90225178,90225397,90225827,90227642,90229676	Gene ID= ENSG00000185033.14 TPM= 16.35 Transcript Type= protein_coding
chr15	90184963	90229670	90184963	90229670	+	ENST00000332496.10@SEMA4B	ENST00000332496.10	protein_coding	90184963,90201458,90217439,90217767,90219793,90220982,90221367,90221614,90223559,90223838,90224968,90225282,90225661,90227557,90227904	90185081,90201735,90217602,90217829,90219891,90221093,90221480,90221765,90223740,90223988,90225178,90225397,90225827,90227642,90229670	Gene ID= ENSG00000185033.14 TPM= 80.56 Transcript Type= protein_coding
chr15	90229975	90234047	90229975	90234047	-	ENST00000328649.10@CIB1	ENST00000328649.10	protein_coding	90233835,90233669,90232219,90231357,90231095,90230934,90229975	90234047,90233703,90232327,90231507,90231213,90231022,90230505	Gene ID= ENSG00000185043.10 TPM= 94.58 Transcript Type= protein_coding
chr15	90230246	90233992	90230246	90233992	-	transcript4277.chr15.nic@CIB1	transcript4277.chr15.nic	protein_coding	90233835,90232219,90231357,90231095,90230934,90230246	90233992,90233703,90231507,90231213,90231022,90230505	Gene ID= ENSG00000185043.10 TPM= 14.01 Transcript Type= NA
chr15	90230246	90233934	90230246	90233934	-	transcript4283.chr15.nic@CIB1	transcript4283.chr15.nic	protein_coding	90233835,90231357,90231095,90230934,90230246	90233934,90233703,90231213,90231022,90230505	Gene ID= ENSG00000185043.10 TPM= 4.67 Transcript Type= NA
chr15	90265659	90273231	90265659	90273231	+	ENST00000331497.3@NGRN	ENST00000331497.3	protein_coding	90265659,90271188	90266398,90273231	Gene ID= ENSG00000182768.8 TPM= 255.7 Transcript Type= processed_transcript
chr15	90276736	90277875	90276736	90277875	+	transcript4294.chr15.nnic@NA	transcript4294.chr15.nnic	NA	90276736	90277875	Gene ID= novel_gene_chr15_4295 TPM= 2.34 Transcript Type= NA
chr15	90352245	90362847	90352245	90362847	+	ENST00000354377.7@ZNF774	ENST00000354377.7	protein_coding	90352245,90354642,90358851,90360043	90352411,90354764,90358957,90362847	Gene ID= ENSG00000196391.10 TPM= 2.34 Transcript Type= protein_coding
chr15	90388248	90476700	90388248	90476700	+	transcript4304.chr15.nic@IQGAP1	transcript4304.chr15.nic	protein_coding	90388248,90390774,90426110,90429589,90433719,90439332,90440502,90441506,90443394,90448573,90449559,90452775,90453132,90454428,90456152,90466001,90466269,90467450,90472840,90473715,90473896,90474064,90474485,90476663	90388396,90390873,90426266,90429666,90433795,90439399,90440615,90441684,90443478,90448736,90449643,90452938,90453292,90454552,90456315,90466091,90466436,90467592,90473010,90473798,90473967,90474133,90474693,90476700	Gene ID= ENSG00000140575.12 TPM= 16.93 Transcript Type= NA
chr15	90388218	90502243	90388218	90502243	+	ENST00000268182.9@IQGAP1	ENST00000268182.9	protein_coding	90388218,90390774,90426110,90429589,90433719,90439332,90440502,90441506,90443394,90448573,90449559,90452775,90453132,90454428,90456152,90466001,90466269,90467450,90472840,90473715,90473896,90474064,90474485,90476663,90477067,90477665,90481960,90482197,90483361,90484220,90486030,90486954,90487495,90491333,90492545,90494713,90497232,90499995	90388396,90390873,90426266,90429666,90433795,90439399,90440615,90441684,90443478,90448736,90449643,90452938,90453292,90454552,90456315,90466091,90466436,90467592,90473010,90473798,90473967,90474133,90474693,90476818,90477230,90477889,90482100,90482281,90483593,90484352,90486132,90487089,90487582,90491545,90492711,90494835,90497340,90502243	Gene ID= ENSG00000140575.12 TPM= 165.21 Transcript Type= protein_coding
chr15	90436065	90438417	90436065	90438417	-	transcript4309.chr15.nnic@NA	transcript4309.chr15.nnic	NA	90436065	90438417	Gene ID= novel_gene_chr15_4310 TPM= 2.34 Transcript Type= NA
chr15	90529925	90645345	90529925	90645345	+	ENST00000420329.6@CRTC3	ENST00000420329.6	protein_coding	90529925,90540039,90593636,90602324,90604385,90607378,90614453,90617883,90619741,90625776,90629234,90638446,90638735,90641097,90641935	90530203,90540137,90593755,90602385,90604447,90607478,90614488,90617968,90619790,90625993,90629532,90638646,90638815,90641199,90645345	Gene ID= ENSG00000140577.15 TPM= 47.87 Transcript Type= protein_coding
chr15	90529884	90595577	90529884	90595577	+	transcript4319.chr15.nic@CRTC3	transcript4319.chr15.nic	protein_coding	90529884,90540039,90593636	90530203,90540137,90595577	Gene ID= ENSG00000140577.15 TPM= 5.84 Transcript Type= NA
chr15	90554208	90557066	90554208	90557066	-	transcript4320.chr15.nnic@NA	transcript4320.chr15.nnic	NA	90554208	90557066	Gene ID= novel_gene_chr15_4321 TPM= 3.5 Transcript Type= NA
chr15	90717327	90816165	90717327	90816165	+	ENST00000355112.7@BLM	ENST00000355112.7	protein_coding	90717327,90747389,90749367,90751787,90754811,90760147,90760594,90762966,90765296,90766910,90769133,90769438,90782822,90784921,90790649,90794167,90798190,90803521,90804167,90809137,90811205,90815102	90717440,90747490,90750067,90751946,90754938,90760279,90761255,90763157,90765414,90767023,90769231,90769586,90782928,90785081,90790844,90794357,90798337,90803720,90804359,90809259,90811406,90816165	Gene ID= ENSG00000197299.10 TPM= 1.17 Transcript Type= protein_coding
chr15	90871539	90883458	90871539	90883458	+	ENST00000610579.4@FURIN	ENST00000610579.4	protein_coding	90871539,90875582,90876255,90876462,90876896,90877135,90877527,90878132,90878764,90879444,90879671,90879867,90880094,90880691,90880930,90881286	90871605,90875917,90876353,90876557,90877024,90877211,90877615,90878304,90878976,90879544,90879774,90879984,90880273,90880815,90881040,90883458	Gene ID= ENSG00000140564.11 TPM= 177.47 Transcript Type= protein_coding
chr15	90884451	90895776	90884451	90895776	+	transcript4334.chr15.nic@FES	transcript4334.chr15.nic	protein_coding	90884451,90885037,90885412,90886961,90887187,90889306,90889517,90889840,90890092,90890401,90890982,90891554,90892058,90892707,90893100,90893291,90893654,90893936,90895416	90884639,90885258,90885585,90887057,90887370,90889443,90889636,90889962,90890278,90890484,90891191,90891676,90892111,90892825,90893194,90893414,90893811,90894058,90895776	Gene ID= ENSG00000182511.11 TPM= 29.19 Transcript Type= NA
chr15	90884076	90895776	90884076	90895776	+	transcript4338.chr15.nic@FES	transcript4338.chr15.nic	protein_coding	90884076,90885037,90885412,90886961,90887187,90889306,90889517,90889840,90890092,90890401,90891554,90892058,90892707,90893100,90893291,90893654,90893936,90895416	90884544,90885258,90885585,90887057,90887370,90889443,90889636,90889962,90890278,90890484,90891676,90892111,90892825,90893194,90893414,90893811,90894058,90895776	Gene ID= ENSG00000182511.11 TPM= 23.64 Transcript Type= NA
chr15	90884434	90895776	90884434	90895776	+	transcript4341.chr15.nic@FES	transcript4341.chr15.nic	protein_coding	90884434,90885037,90886961,90887187,90889306,90889517,90889840,90890092,90890401,90890982,90891554,90892058,90892707,90893100,90893291,90893654,90893936,90895416	90884544,90885258,90887057,90887370,90889443,90889636,90889962,90890278,90890484,90891191,90891676,90892111,90892825,90893194,90893414,90893811,90894058,90895776	Gene ID= ENSG00000182511.11 TPM= 8.17 Transcript Type= NA
chr15	90884451	90895776	90884451	90895776	+	transcript4343.chr15.nic@FES	transcript4343.chr15.nic	protein_coding	90884451,90885037,90885412,90886961,90887187,90889306,90889517,90889840,90890092,90890401,90891554,90892058,90892707,90893100,90893291,90893654,90893936,90895416	90884639,90885258,90885585,90887057,90887370,90889443,90889636,90889962,90890278,90890484,90891676,90892111,90892825,90893194,90893414,90893811,90894058,90895776	Gene ID= ENSG00000182511.11 TPM= 7.3 Transcript Type= NA
chr15	90884412	90895776	90884412	90895776	+	ENST00000328850.7@FES	ENST00000328850.7	protein_coding	90884412,90885037,90885412,90886961,90887187,90889306,90889517,90889840,90890092,90890401,90890982,90891554,90892058,90892707,90893100,90893291,90893654,90893936,90895416	90884544,90885258,90885585,90887057,90887370,90889443,90889636,90889962,90890278,90890484,90891191,90891676,90892111,90892825,90893194,90893414,90893811,90894058,90895776	Gene ID= ENSG00000182511.11 TPM= 65.39 Transcript Type= protein_coding
chr15	90892670	90895083	90892670	90895083	+	transcript4371.chr15.nnic@NA	transcript4371.chr15.nnic	NA	90892670	90895083	Gene ID= novel_gene_chr15_4372 TPM= 2.34 Transcript Type= NA
chr15	90895001	90896971	90895001	90896971	-	transcript4373.chr15.nnic@NA	transcript4373.chr15.nnic	NA	90895001	90896971	Gene ID= novel_gene_chr15_4374 TPM= 2.34 Transcript Type= NA
chr15	90902625	90921191	90902625	90921191	+	transcript4375.chr15.nnic@MAN2A2	transcript4375.chr15.nnic	protein_coding	90902625,90903231,90904190,90905251,90905579,90905845,90906370,90906740,90907309,90909327,90910090,90910501,90910847,90911171,90911385,90912043,90912542,90912877,90913273,90913614,90916123,90918194,90918645,90919635	90902975,90903432,90904339,90905508,90905723,90906016,90906497,90906913,90907495,90909504,90910292,90910683,90910961,90911238,90911550,90912279,90912664,90912991,90913406,90913755,90916256,90918388,90918755,90921191	Gene ID= ENSG00000196547.14 TPM= 33.28 Transcript Type= NA
chr15	90902750	90921191	90902750	90921191	+	transcript4378.chr15.nic@MAN2A2	transcript4378.chr15.nic	protein_coding	90902750,90904190,90905251,90905579,90905845,90906370,90906740,90907309,90909327,90910090,90910501,90910847,90911171,90911385,90912043,90912542,90912877,90913273,90913614,90916123,90918194,90918645,90919635	90902975,90904339,90905508,90905723,90906016,90906497,90906913,90907495,90909504,90910292,90910683,90910961,90911238,90911550,90912279,90912664,90912991,90913406,90913755,90916256,90918388,90918755,90921191	Gene ID= ENSG00000196547.14 TPM= 30.94 Transcript Type= NA
chr15	90930180	90954093	90930180	90954093	+	ENST00000394275.6@UNC45A	ENST00000394275.6	protein_coding	90930180,90933977,90934339,90934944,90935544,90935946,90936285,90939731,90940306,90942437,90942912,90944892,90946614,90947796,90948142,90948654,90949316,90949654,90950154,90950500,90952929,90953155,90953459	90930255,90934143,90934549,90935330,90935705,90935982,90936460,90939823,90940473,90942605,90943082,90945063,90946914,90947890,90948283,90948794,90949443,90949720,90950267,90950615,90953046,90953310,90954093	Gene ID= ENSG00000140553.17 TPM= 45.54 Transcript Type= protein_coding
chr15	90935285	90954093	90935285	90954093	+	ENST00000418476.2@UNC45A	ENST00000418476.2	protein_coding	90935285,90935544,90935946,90936285,90939731,90940306,90942437,90942912,90944892,90946614,90947796,90948142,90948654,90949316,90949654,90950154,90950500,90952929,90953155,90953459	90935375,90935705,90935982,90936460,90939823,90940473,90942605,90943082,90945063,90946914,90947890,90948283,90948794,90949443,90949720,90950267,90950615,90953046,90953310,90954093	Gene ID= ENSG00000140553.17 TPM= 47.87 Transcript Type= protein_coding
chr15	90951011	90954482	90951011	90954482	+	transcript4396.chr15.nic@UNC45A	transcript4396.chr15.nic	protein_coding	90951011,90953155	90953046,90954482	Gene ID= ENSG00000140553.17 TPM= 2.34 Transcript Type= NA
chr15	90954870	90963125	90954870	90963125	+	ENST00000394258.6@RCCD1	ENST00000394258.6	protein_coding	90954870,90956612,90957113,90957604,90959900,90960328,90961025,90961618	90954948,90956900,90957503,90957725,90959998,90960498,90961054,90963125	Gene ID= ENSG00000166965.12 TPM= 4.67 Transcript Type= protein_coding
chr15	90954884	90962224	90954884	90962224	+	transcript4407.chr15.nic@RCCD1	transcript4407.chr15.nic	protein_coding	90954884,90956612,90957604,90959900,90960328,90961025,90961618	90954948,90957503,90957725,90959998,90960498,90961054,90962224	Gene ID= ENSG00000166965.12 TPM= 2.34 Transcript Type= NA
chr15	90954881	90962324	90954881	90962324	+	ENST00000555155.5@RCCD1	ENST00000555155.5	protein_coding	90954881,90956612,90957113,90957604,90959900,90960334,90961025,90961618	90954948,90956900,90957503,90957725,90959998,90960498,90961054,90962324	Gene ID= ENSG00000166965.12 TPM= 9.34 Transcript Type= protein_coding
chr15	90966077	90995629	90966077	90995629	-	ENST00000361188.9@PRC1	ENST00000361188.9	protein_coding	90994407,90984693,90984018,90981748,90981499,90980884,90980242,90979158,90976676,90974585,90974136,90970404,90969447,90966077	90995629,90984825,90984140,90981981,90981669,90981033,90980389,90979294,90976771,90974731,90974246,90970514,90969623,90967202	Gene ID= ENSG00000198901.13 TPM= 1.17 Transcript Type= protein_coding
chr15	90966038	90994495	90966038	90994495	-	ENST00000394249.7@PRC1	ENST00000394249.7	protein_coding	90994407,90984693,90984018,90981748,90981499,90980884,90980242,90979158,90976676,90974585,90974136,90970404,90969447,90969079,90966038	90994495,90984825,90984140,90981981,90981669,90981033,90980389,90979294,90976771,90974731,90974246,90970514,90969623,90969120,90967202	Gene ID= ENSG00000198901.13 TPM= 2.34 Transcript Type= protein_coding
chr15	90998416	91022603	90998416	91022603	-	ENST00000333371.7@VPS33B	ENST00000333371.7	protein_coding	91022154,91017805,91016963,91014384,91013804,91009801,91007870,91007469,91006950,91006652,91006372,91005973,91005694,91005380,91005055,91004877,91003085,91002050,91001389,91000490,90999900,90999677,90998416	91022603,91017885,91017024,91014433,91013871,91009846,91007964,91007573,91007046,91006729,91006445,91006059,91005784,91005454,91005119,91004931,91003131,91002182,91001462,91000591,90999975,90999793,90999054	Gene ID= ENSG00000184056.14 TPM= 9.34 Transcript Type= protein_coding
chr15	90998675	91022513	90998675	91022513	-	ENST00000574755.5@VPS33B	ENST00000574755.5	protein_coding	91022154,91017805,91014384,91013804,91009801,91007870,91007469,91006950,91006652,91006372,91005973,91005694,91005380,91005055,91004877,91003085,91002050,91001389,91000490,90999900,90999677,90998675	91022513,91017885,91014433,91013871,91009846,91007964,91007573,91007046,91006729,91006445,91006059,91005784,91005454,91005119,91004931,91003131,91002182,91001462,91000591,90999975,90999793,90999054	Gene ID= ENSG00000184056.14 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr15	91853380	92163568	91853380	92163568	+	transcript4418.chr15.nnic@SLCO3A1	transcript4418.chr15.nnic	protein_coding	91853380,91915993,92094881,92104279,92120465,92126061,92128351,92146984,92150950,92162756,92163296	91854088,91916458,92094979,92104542,92120629,92126259,92128489,92147159,92151014,92162998,92163568	Gene ID= ENSG00000176463.13 TPM= 9.34 Transcript Type= NA
chr15	91853695	92165903	91853695	92165903	+	ENST00000318445.10@SLCO3A1	ENST00000318445.10	protein_coding	91853695,91915993,92094881,92104279,92120465,92126061,92128351,92146984,92150950,92162756	91854088,91916458,92094979,92104542,92120629,92126259,92128489,92147159,92151014,92165903	Gene ID= ENSG00000176463.13 TPM= 10.51 Transcript Type= protein_coding
chr15	91853856	92172435	91853856	92172435	+	ENST00000424469.2@SLCO3A1	ENST00000424469.2	protein_coding	91853856,91915993,92094881,92104279,92120465,92126061,92128351,92146984,92150950,92162756,92171780	91854088,91916458,92094979,92104542,92120629,92126259,92128489,92147159,92151014,92162998,92172435	Gene ID= ENSG00000176463.13 TPM= 5.84 Transcript Type= protein_coding
chr15	91919760	91930137	91919760	91930137	-	transcript4431.chr15.nnic@NA	transcript4431.chr15.nnic	NA	91919760	91930137	Gene ID= novel_gene_chr15_4432 TPM= 2.34 Transcript Type= NA
chr15	91921874	91924537	91921874	91924537	+	transcript4427.chr15.nnic@NA	transcript4427.chr15.nnic	NA	91921874	91924537	Gene ID= novel_gene_chr15_4428 TPM= 3.5 Transcript Type= NA
chr15	92080392	92085785	92080392	92085785	-	transcript4433.chr15.nnic@NA	transcript4433.chr15.nnic	NA	92080392	92085785	Gene ID= novel_gene_chr15_4434 TPM= 2.34 Transcript Type= NA
chr15	92617443	92655958	92617443	92655958	-	ENST00000327355.5@FAM174B	ENST00000327355.5	protein_coding	92655316,92630214,92617443	92655958,92630345,92619459	Gene ID= ENSG00000185442.12 TPM= 226.51 Transcript Type= protein_coding
chr15	92808844	92809884	92808844	92809884	-	ENST00000554082.1@FAM174B	ENST00000554082.1	protein_coding	92809646,92808844	92809884,92809013	Gene ID= ENSG00000185442.12 TPM= 1.17 Transcript Type= processed_transcript
chr15	92795576	92797919	92795576	92797919	+	transcript4456.chr15.nnic@NA	transcript4456.chr15.nnic	NA	92795576	92797919	Gene ID= novel_gene_chr15_4457 TPM= 4.67 Transcript Type= NA
chr15	92882682	92898072	92882682	92898072	+	transcript4463.chr15.nic@LINC01578	transcript4463.chr15.nic	processed_transcript	92882682,92883585,92885515,92886169,92892004,92897724	92883186,92883778,92885584,92886254,92892072,92898072	Gene ID= ENSG00000272888.5 TPM= 16.35 Transcript Type= NA
chr15	92882829	92885185	92882829	92885185	+	transcript4483.chr15.nnic@NA	transcript4483.chr15.nnic	NA	92882829	92885185	Gene ID= novel_gene_chr15_4484 TPM= 2.34 Transcript Type= NA
chr15	92894155	92898087	92894155	92898087	+	transcript4481.chr15.nnic@NA	transcript4481.chr15.nnic	NA	92894155	92898087	Gene ID= novel_gene_chr15_4482 TPM= 2.34 Transcript Type= NA
chr15	92897114	92900562	92897114	92900562	-	transcript4487.chr15.nnic@NA	transcript4487.chr15.nnic	NA	92897114	92900562	Gene ID= novel_gene_chr15_4488 TPM= 4.67 Transcript Type= NA
chr15	92900189	93022162	92900189	93022162	+	ENST00000626874.2@CHD2	ENST00000626874.2	protein_coding	92900189,92901167,92924321,92927244,92929030,92937518,92939578,92941822,92942843,92944415,92945821,92946038,92948952,92953357,92955423,92956459,92967325,92971765,92972265,92974879,92978234,92979135,92980815,92981365,92984330,92985498,92991476,92992859,92996957,92997253,92998499,93000512,93002177,93004617,93009145,93012345,93014696,93020012	92900824,92901299,92924552,92927330,92929091,92937625,92939718,92941955,92943068,92944515,92945865,92946216,92949076,92953573,92955512,92956649,92967513,92971927,92972417,92974950,92978383,92979283,92980911,92981457,92984500,92985673,92991517,92992998,92997095,92997403,92998621,93000640,93002317,93004751,93009323,93012444,93014909,93022162	Gene ID= ENSG00000173575.20 TPM= 6.42 Transcript Type= protein_coding
chr15	92900335	92949234	92900335	92949234	+	ENST00000420239.6@CHD2	ENST00000420239.6	protein_coding	92900335,92901167,92924321,92927244,92929030,92937518,92939578,92941822,92942843,92944415,92945821,92946038,92948952	92900824,92901299,92924552,92927330,92929091,92937625,92939718,92941955,92943068,92944515,92945865,92946216,92949234	Gene ID= ENSG00000173575.20 TPM= 2.92 Transcript Type= protein_coding
chr15	92900320	92902302	92900320	92902302	+	transcript4485.chr15.nnic@NA	transcript4485.chr15.nnic	NA	92900320	92902302	Gene ID= novel_gene_chr15_4486 TPM= 2.34 Transcript Type= NA
chr15	93043416	93073148	93043416	93073148	-	ENST00000542321.6@RGMA	ENST00000542321.6	protein_coding	93072916,93051993,93043416	93073148,93052507,93045705	Gene ID= ENSG00000182175.13 TPM= 3.5 Transcript Type= protein_coding
chr15	94231507	94480403	94231507	94480403	+	transcript4494.chr15.nic@MCTP2	transcript4494.chr15.nic	protein_coding	94231507,94298201,94314282,94315529,94339290,94340199,94340813,94345129,94356137,94358482,94367605,94370087,94384022,94385423,94398961,94399921,94401900,94440176,94442919,94458137,94470333,94476696,94478966	94231664,94298730,94314344,94315637,94339432,94340275,94340924,94345164,94356301,94358612,94367791,94370180,94384124,94385525,94399062,94399995,94402019,94440298,94442960,94458246,94470442,94476793,94480403	Gene ID= ENSG00000140563.14 TPM= 7.01 Transcript Type= NA
chr15	95477843	95507847	95477843	95507847	+	transcript4508.chr15.nnic@LINC00924	transcript4508.chr15.nnic	lincRNA	95477843,95501508,95506054	95477984,95501651,95507847	Gene ID= ENSG00000259134.5 TPM= 2.34 Transcript Type= NA
chr15	96265345	96272257	96265345	96272257	-	transcript4538.chr15.nic@NR2F2-AS1	transcript4538.chr15.nic	antisense_RNA	96271703,96265345	96272257,96269996	Gene ID= ENSG00000247809.7 TPM= 2.34 Transcript Type= NA
chr15	96334120	96337788	96334120	96337788	+	transcript4540.chr15.nnic@NA	transcript4540.chr15.nnic	NA	96334120	96337788	Gene ID= novel_gene_chr15_4541 TPM= 2.34 Transcript Type= NA
chr15	96340654	96342446	96340654	96342446	-	transcript4542.chr15.nnic@NA	transcript4542.chr15.nnic	NA	96341170,96340654	96342446,96341014	Gene ID= novel_gene_chr15_4543 TPM= 2.34 Transcript Type= NA
chr15	97960698	97973838	97960698	97973838	+	ENST00000268042.6@ARRDC4	ENST00000268042.6	protein_coding	97960698,97965600,97965895,97968014,97969123,97969883,97970589,97971131	97961168,97965666,97966042,97968116,97969379,97970045,97970743,97973838	Gene ID= ENSG00000140450.8 TPM= 127.27 Transcript Type= protein_coding
chr15	98710670	98713018	98710670	98713018	-	transcript4553.chr15.nnic@NA	transcript4553.chr15.nnic	NA	98710670	98713018	Gene ID= novel_gene_chr15_4554 TPM= 4.67 Transcript Type= NA
chr15	99105035	99135589	99105035	99135589	+	ENST00000336292.10@SYNM	ENST00000336292.10	protein_coding	99105035,99113591,99126722,99129367	99106009,99113715,99126792,99135589	Gene ID= ENSG00000182253.14 TPM= 16.35 Transcript Type= protein_coding
chr15	99105078	99118643	99105078	99118643	+	transcript4558.chr15.nnic@SYNM	transcript4558.chr15.nnic	protein_coding	99105078,99113591,99117938	99106009,99113715,99118643	Gene ID= ENSG00000182253.14 TPM= 2.34 Transcript Type= NA
chr15	99105080	99135583	99105080	99135583	+	ENST00000594047.2@SYNM	ENST00000594047.2	protein_coding	99105080,99113591,99126722,99129367,99132750	99106009,99113715,99126792,99131813,99135583	Gene ID= ENSG00000182253.14 TPM= 7.01 Transcript Type= protein_coding
chr15	99136323	99249581	99136323	99249581	-	transcript4562.chr15.nic@TTC23	transcript4562.chr15.nic	protein_coding	99249417,99245389,99241365,99228533,99221741,99218898,99218588,99199919,99175050,99161740,99156148,99139317,99136323	99249581,99245510,99241559,99228732,99221864,99219048,99218713,99200096,99175155,99161867,99156297,99139399,99138127	Gene ID= ENSG00000103852.12 TPM= 3.12 Transcript Type= NA
chr15	99136323	99249600	99136323	99249600	-	transcript4564.chr15.nic@TTC23	transcript4564.chr15.nic	protein_coding	99249417,99241365,99228533,99221741,99218898,99218588,99199919,99175050,99161740,99156148,99139317,99136323	99249600,99241559,99228732,99221864,99219048,99218713,99200096,99175155,99161867,99156297,99139399,99138127	Gene ID= ENSG00000103852.12 TPM= 4.29 Transcript Type= NA
chr15	99136323	99249560	99136323	99249560	-	transcript4568.chr15.nic@TTC23	transcript4568.chr15.nic	protein_coding	99249417,99228533,99221741,99218898,99218588,99199919,99175050,99161740,99156148,99139317,99136323	99249560,99228732,99221864,99219048,99218713,99200096,99175155,99161867,99156297,99139399,99138127	Gene ID= ENSG00000103852.12 TPM= 4.29 Transcript Type= NA
chr15	99251466	99386296	99251466	99386296	+	transcript4573.chr15.nic@LRRC28	transcript4573.chr15.nic	protein_coding	99251466,99255898,99276576,99287257,99287814,99317464,99333923,99352369,99361336,99363106,99386030	99251541,99255973,99276616,99287294,99287951,99317546,99334129,99352471,99361511,99363265,99386296	Gene ID= ENSG00000168904.14 TPM= 2.34 Transcript Type= NA
chr15	99251505	99386296	99251505	99386296	+	ENST00000447360.6@LRRC28	ENST00000447360.6	protein_coding	99251505,99255898,99276576,99287257,99287814,99333923,99352369,99361336,99386030	99251541,99256125,99276616,99287294,99287951,99334129,99352471,99361511,99386296	Gene ID= ENSG00000168904.14 TPM= 2.34 Transcript Type= protein_coding
chr15	99386612	99389526	99386612	99389526	+	transcript4588.chr15.nnic@NA	transcript4588.chr15.nnic	NA	99386612	99389526	Gene ID= novel_gene_chr15_4589 TPM= 3.5 Transcript Type= NA
chr15	99565993	99716341	99565993	99716341	+	transcript4596.chr15.nnic@MEF2A	transcript4596.chr15.nnic	protein_coding	99565993,99598430,99620864,99632978,99645561,99671520,99674393,99675399,99690241,99706729,99710634,99712390	99566104,99598511,99621080,99633173,99645764,99671657,99674612,99675458,99690428,99706855,99710760,99716341	Gene ID= ENSG00000068305.17 TPM= 2.72 Transcript Type= NA
chr15	99565993	99716399	99565993	99716399	+	transcript4599.chr15.nic@MEF2A	transcript4599.chr15.nic	protein_coding	99565993,99598430,99632978,99645561,99671323,99674393,99675399,99690241,99706729,99710634,99712390,99715468	99566104,99598511,99633173,99645764,99671657,99674612,99675458,99690428,99706855,99710760,99712835,99716399	Gene ID= ENSG00000068305.17 TPM= 2.34 Transcript Type= NA
chr15	99565301	99716406	99565301	99716406	+	transcript4613.chr15.nnic@MEF2A	transcript4613.chr15.nnic	protein_coding	99565301,99632978,99645561,99671323,99674393,99675399,99690241,99706729,99710634,99712390	99565669,99633173,99645764,99671454,99674612,99675458,99690428,99706855,99710760,99716406	Gene ID= ENSG00000068305.17 TPM= 11.48 Transcript Type= NA
chr15	99566014	99716406	99566014	99716406	+	transcript4618.chr15.nic@MEF2A	transcript4618.chr15.nic	protein_coding	99566014,99632978,99645561,99671520,99674393,99675399,99690241,99706729,99710634,99712390	99566104,99633173,99645764,99671657,99674612,99675458,99690428,99706855,99710760,99716406	Gene ID= ENSG00000068305.17 TPM= 13.81 Transcript Type= NA
chr15	99565980	99713782	99565980	99713782	+	ENST00000557785.5@MEF2A	ENST00000557785.5	protein_coding	99565980,99598430,99632978,99645561,99671323,99674393,99675399,99690241,99706729,99710634,99712390	99566104,99598511,99633173,99645764,99671454,99674612,99675458,99690428,99706855,99710760,99713782	Gene ID= ENSG00000068305.17 TPM= 1.17 Transcript Type= protein_coding
chr15	99637119	99641792	99637119	99641792	-	transcript4637.chr15.nnic@NA	transcript4637.chr15.nnic	NA	99637119	99641792	Gene ID= novel_gene_chr15_4638 TPM= 4.67 Transcript Type= NA
chr15	99662480	99662768	99662480	99662768	-	transcript4639.chr15.nnic@NA	transcript4639.chr15.nnic	NA	99662480	99662768	Gene ID= novel_gene_chr15_4640 TPM= 2.34 Transcript Type= NA
chr15	99727401	99733444	99727401	99733444	-	ENST00000332728.8@LYSMD4	ENST00000332728.8	protein_coding	99733345,99732929,99731718,99731173,99727401	99733444,99733028,99732007,99731198,99729731	Gene ID= ENSG00000183060.15 TPM= 2.34 Transcript Type= protein_coding
chr15	99727405	99733437	99727405	99733437	-	transcript4644.chr15.nic@LYSMD4	transcript4644.chr15.nic	protein_coding	99733345,99731718,99727405	99733437,99732007,99729731	Gene ID= ENSG00000183060.15 TPM= 9.34 Transcript Type= NA
chr15	99807027	99901309	99807027	99901309	+	transcript4650.chr15.nnic@AC090825.1	transcript4650.chr15.nnic	lincRNA	99807027,99808147,99812973,99876953,99896881	99807098,99808302,99813086,99877148,99901309	Gene ID= ENSG00000259363.5 TPM= 2.34 Transcript Type= NA
chr15	100569235	100602206	100569235	100602206	-	transcript4659.chr15.nnic@LINS1	transcript4659.chr15.nnic	protein_coding	100602121,100580444,100580263,100574987,100573651,100571894,100569235	100602206,100580945,100580352,100575128,100574241,100572009,100570117	Gene ID= ENSG00000140471.16 TPM= 2.72 Transcript Type= NA
chr15	100566914	100602240	100566914	100602240	-	ENST00000314742.12@LINS1	ENST00000314742.12	protein_coding	100602121,100580444,100580263,100574987,100573651,100571894,100566914	100602240,100580945,100580352,100575128,100574241,100572065,100570117	Gene ID= ENSG00000140471.16 TPM= 1.55 Transcript Type= protein_coding
chr15	100569235	100602206	100569235	100602206	-	transcript4663.chr15.nic@LINS1	transcript4663.chr15.nic	protein_coding	100602121,100580444,100580263,100574987,100571894,100569235	100602206,100580945,100580352,100575128,100574241,100570117	Gene ID= ENSG00000140471.16 TPM= 7.39 Transcript Type= NA
chr15	100602534	100651705	100602534	100651705	+	ENST00000332783.11@ASB7	ENST00000332783.11	protein_coding	100602534,100603215,100609707,100612166,100629437,100648323	100603046,100603313,100609828,100612427,100630042,100651705	Gene ID= ENSG00000183475.12 TPM= 12.84 Transcript Type= protein_coding
chr15	100602609	100630209	100602609	100630209	+	ENST00000343276.4@ASB7	ENST00000343276.4	protein_coding	100602609,100603215,100609707,100612166,100629437	100603046,100603313,100609828,100612427,100630209	Gene ID= ENSG00000183475.12 TPM= 2.34 Transcript Type= protein_coding
chr15	100879376	100916626	100879376	100916626	+	ENST00000329841.9@ALDH1A3	ENST00000329841.9	protein_coding	100879376,100885267,100887572,100892510,100892945,100893954,100895933,100898083,100900575,100905523,100907121,100908408,100914701	100880006,100885371,100887712,100892639,100893006,100894082,100896046,100898185,100900759,100905687,100907278,100908482,100916626	Gene ID= ENSG00000184254.16 TPM= 33.86 Transcript Type= protein_coding
chr15	100919215	101070112	100919215	101070112	+	ENST00000388948.7@LRRK1	ENST00000388948.7	protein_coding	100919215,100924511,100973804,100983528,100988634,100989250,101008837,101010450,101010674,101012008,101014316,101015326,101021053,101021845,101022383,101024803,101025965,101027261,101027638,101028956,101045981,101048494,101049644,101051711,101052922,101053223,101054946,101056856,101057990,101061171,101062574,101065352,101066640,101068671	100919451,100924729,100973967,100983699,100988813,100989398,101009063,101010577,101010837,101012145,101014428,101015402,101021182,101021957,101022597,101024967,101026137,101027381,101027797,101029232,101046152,101048657,101049783,101051960,101053088,101053420,101055223,101057050,101058141,101061288,101062690,101066205,101066741,101070112	Gene ID= ENSG00000154237.12 TPM= 10.51 Transcript Type= protein_coding
chr15	101071207	101072888	101071207	101072888	+	transcript4698.chr15.nnic@NA	transcript4698.chr15.nnic	NA	101071207	101072888	Gene ID= novel_gene_chr15_4699 TPM= 3.5 Transcript Type= NA
chr15	101175822	101251946	101175822	101251946	-	transcript4684.chr15.nnic@CHSY1	transcript4684.chr15.nnic	protein_coding	101251894,101251137,101235082,101175822	101251946,101251485,101235577,101178980	Gene ID= ENSG00000131873.5 TPM= 5.84 Transcript Type= NA
chr15	101175809	101251991	101175809	101251991	-	transcript4689.chr15.nnic@CHSY1	transcript4689.chr15.nnic	protein_coding	101251137,101235255,101175809	101251991,101235577,101178980	Gene ID= ENSG00000131873.5 TPM= 3.5 Transcript Type= NA
chr15	101175809	101251946	101175809	101251946	-	transcript4697.chr15.nnic@CHSY1	transcript4697.chr15.nnic	protein_coding	101251137,101175809	101251946,101178980	Gene ID= ENSG00000131873.5 TPM= 3.5 Transcript Type= NA
chr15	101175723	101251932	101175723	101251932	-	ENST00000254190.3@CHSY1	ENST00000254190.3	protein_coding	101251137,101235082,101175723	101251932,101235577,101178980	Gene ID= ENSG00000131873.5 TPM= 59.55 Transcript Type= protein_coding
chr15	101272182	101277446	101272182	101277446	-	ENST00000526049.5@SELENOS	ENST00000526049.5	protein_coding	101277342,101276541,101275255,101274592,101274420,101272182	101277446,101276675,101275361,101274681,101274495,101272856	Gene ID= ENSG00000131871.14 TPM= 235.85 Transcript Type= protein_coding
chr15	101281510	101295251	101281510	101295251	-	ENST00000254193.10@SNRPA1	ENST00000254193.10	protein_coding	101295097,101293025,101291962,101287656,101286908,101286214,101285726,101284967,101281510	101295251,101293172,101292040,101287702,101287010,101286293,101285801,101285060,101281782	Gene ID= ENSG00000131876.16 TPM= 43.78 Transcript Type= protein_coding
chr15	101281514	101295282	101281514	101295282	-	ENST00000558036.5@SNRPA1	ENST00000558036.5	protein_coding	101295097,101293025,101291962,101287656,101285726,101284967,101281514	101295282,101293172,101292040,101287702,101287010,101285060,101281782	Gene ID= ENSG00000131876.16 TPM= 7.01 Transcript Type= retained_intron
chr15	101281514	101295204	101281514	101295204	-	ENST00000559309.5@SNRPA1	ENST00000559309.5	protein_coding	101295097,101293025,101291962,101287656,101286908,101285726,101284967,101281514	101295204,101293172,101292040,101287702,101287010,101285801,101285060,101281782	Gene ID= ENSG00000131876.16 TPM= 28.61 Transcript Type= nonsense_mediated_decay
chr15	101303928	101489839	101303928	101489839	-	ENST00000611716.4@PCSK6	ENST00000611716.4	protein_coding	101489374,101443556,101431990,101431320,101429987,101427892,101398404,101393212,101389464,101384322,101382092,101370335,101366196,101331852,101331651,101326377,101324850,101322520,101318319,101313376,101307213,101303928	101489839,101443660,101432100,101431463,101430063,101427980,101398576,101393424,101389564,101384425,101382209,101370523,101366332,101332031,101331689,101326479,101325046,101322607,101318422,101313505,101307325,101305355	Gene ID= ENSG00000140479.16 TPM= 2.92 Transcript Type= protein_coding
chr15	101303934	101489744	101303934	101489744	-	ENST00000618548.4@PCSK6	ENST00000618548.4	protein_coding	101489374,101443556,101431990,101431320,101429987,101427892,101398404,101393212,101389464,101384322,101382092,101370335,101366196,101331852,101326377,101324850,101322520,101318319,101313376,101307213,101303934	101489744,101443660,101432100,101431463,101430063,101427980,101398576,101393424,101389564,101384425,101382209,101370523,101366332,101332031,101326479,101325046,101322607,101318422,101313505,101307325,101305355	Gene ID= ENSG00000140479.16 TPM= 11.09 Transcript Type= protein_coding
chr15	101632977	101652384	101632977	101652384	-	ENST00000559107.5@TM2D3	ENST00000559107.5	protein_coding	101652271,101651696,101650004,101646725,101645087,101632977	101652384,101651773,101650161,101646899,101645162,101633728	Gene ID= ENSG00000184277.12 TPM= 2.34 Transcript Type= protein_coding
chr15	101633259	101652395	101633259	101652395	-	transcript4726.chr15.nnic@TM2D3	transcript4726.chr15.nnic	protein_coding	101652271,101650004,101646725,101645087,101642410,101633259	101652395,101650161,101646899,101645162,101642644,101633907	Gene ID= ENSG00000184277.12 TPM= 2.34 Transcript Type= NA
chr15	101641846	101652391	101641846	101652391	-	ENST00000347970.7@TM2D3	ENST00000347970.7	protein_coding	101652271,101650004,101646725,101645087,101641846	101652391,101650161,101646899,101645162,101642644	Gene ID= ENSG00000184277.12 TPM= 50.79 Transcript Type= protein_coding
chr15	101641848	101652367	101641848	101652367	-	ENST00000333202.7@TM2D3	ENST00000333202.7	protein_coding	101652271,101651696,101650004,101646725,101645087,101641848	101652367,101651773,101650161,101646899,101645162,101642644	Gene ID= ENSG00000184277.12 TPM= 19.27 Transcript Type= protein_coding
chr15	101654213	101724489	101654213	101724489	-	transcript4735.chr15.nic@TARSL2	transcript4735.chr15.nic	protein_coding	101724091,101723093,101721126,101714840,101711880,101708793,101705683,101703859,101702239,101701086,101699331,101685896,101684075,101675600,101671671,101671486,101661712,101657785,101656922,101654213	101724489,101723164,101721322,101714963,101712001,101708910,101705747,101703937,101702385,101701184,101699435,101686062,101684237,101675737,101671748,101671586,101661816,101657857,101657036,101654730	Gene ID= ENSG00000185418.15 TPM= 4.67 Transcript Type= NA
chr15	101653598	101724604	101653598	101724604	-	ENST00000335968.7@TARSL2	ENST00000335968.7	protein_coding	101724091,101723093,101721126,101714840,101711880,101708793,101705683,101703859,101702239,101701086,101685896,101684075,101675600,101671671,101671486,101661712,101657785,101656922,101653598	101724604,101723164,101721322,101714963,101712001,101708910,101705747,101703937,101702385,101701184,101686062,101684237,101675737,101671748,101671586,101661816,101657857,101657036,101654730	Gene ID= ENSG00000185418.15 TPM= 4.67 Transcript Type= protein_coding
chr15	101720524	101724489	101720524	101724489	-	transcript4741.chr15.nic@TARSL2	transcript4741.chr15.nic	protein_coding	101724091,101723093,101720524	101724489,101723164,101721322	Gene ID= ENSG00000185418.15 TPM= 2.34 Transcript Type= NA
chr15	101961603	101966755	101961603	101966755	+	ENST00000559884.5@WASH3P	ENST00000559884.5	transcribed_unprocessed_pseudogene	101961603,101966070,101966522	101961641,101966223,101966755	Gene ID= ENSG00000185596.16 TPM= 3.5 Transcript Type= processed_transcript
chr16	53829	57668	53829	57668	+	ENST00000383018.7@SNRNP25	ENST00000383018.7	protein_coding	53829,55459,55777,56539,57086	54058,55549,55882,56613,57668	Gene ID= ENSG00000161981.10 TPM= 22.18 Transcript Type= protein_coding
chr16	58059	72666	58059	72666	-	transcript13.chr16.nic@RHBDF1	transcript13.chr16.nic	protein_coding	72513,64699,63587,62973,62775,62538,61798,61585,61385,61120,60439,60216,59732,59419,59249,58974,58059	72666,65039,63800,63182,62897,62695,62052,61696,61459,61281,60539,60279,59826,59494,59349,59127,58759	Gene ID= ENSG00000007384.15 TPM= 24.9 Transcript Type= NA
chr16	58059	72613	58059	72613	-	transcript16.chr16.nnic@RHBDF1	transcript16.chr16.nnic	protein_coding	72513,64899,64699,63587,62973,62775,62538,61798,61585,61385,61120,60439,60216,59732,59419,58974,58059	72613,65039,64829,63800,63182,62897,62695,62052,61696,61459,61281,60539,60279,59826,59494,59127,58759	Gene ID= ENSG00000007384.15 TPM= 3.89 Transcript Type= NA
chr16	58059	72666	58059	72666	-	transcript21.chr16.nic@RHBDF1	transcript21.chr16.nic	protein_coding	72513,64899,64699,63587,62973,62775,62538,61798,61585,60439,60216,59732,59419,59249,58974,58059	72666,65039,64829,63800,63182,62897,62695,62052,61696,61459,60279,59826,59494,59349,59127,58759	Gene ID= ENSG00000007384.15 TPM= 8.56 Transcript Type= NA
chr16	58059	72666	58059	72666	-	transcript25.chr16.nic@RHBDF1	transcript25.chr16.nic	protein_coding	72513,64899,64699,63587,62973,62775,62538,61798,61585,60439,59732,59419,59249,58974,58059	72666,65039,64829,63800,63182,62897,62695,62052,61696,61459,60279,59494,59349,59127,58759	Gene ID= ENSG00000007384.15 TPM= 7.39 Transcript Type= NA
chr16	58059	72631	58059	72631	-	ENST00000262316.10@RHBDF1	ENST00000262316.10	protein_coding	72513,64899,64699,63587,62973,62775,62538,61798,61585,61385,61120,60439,60216,59732,59419,59249,58974,58059	72631,65039,64829,63800,63182,62897,62695,62052,61696,61459,61281,60539,60279,59826,59494,59349,59127,58759	Gene ID= ENSG00000007384.15 TPM= 82.12 Transcript Type= protein_coding
chr16	78257	85842	78257	85842	+	ENST00000219431.4@MPG	ENST00000219431.4	protein_coding	78257,79139,79425,83052,85401	78333,79331,79700,83256,85842	Gene ID= ENSG00000103152.11 TPM= 12.84 Transcript Type= protein_coding
chr16	84271	138647	84271	138647	-	transcript30.chr16.nic@NPRL3	transcript30.chr16.nic	protein_coding	138150,130522,119126,117301,112622,110525,100372,98145,93219,92596,89713,88698,86668,84271	138647,130591,119255,117375,112775,110606,100509,98301,93325,92725,89902,88890,86870,84595	Gene ID= ENSG00000103148.15 TPM= 13.43 Transcript Type= NA
chr16	85801	138647	85801	138647	-	transcript33.chr16.nic@NPRL3	transcript33.chr16.nic	protein_coding	138150,130522,119126,117301,112622,110525,100372,98145,93219,92596,89713,88698,85801	138647,130591,119255,117375,112775,110606,100509,98301,93325,92725,89902,88890,86870	Gene ID= ENSG00000103148.15 TPM= 18.1 Transcript Type= NA
chr16	172847	173710	172847	173710	+	ENST00000251595.10@HBA2	ENST00000251595.10	protein_coding	172847,173125,173472	173007,173329,173710	Gene ID= ENSG00000188536.12 TPM= 74.73 Transcript Type= protein_coding
chr16	176680	177522	176680	177522	+	ENST00000320868.9@HBA1	ENST00000320868.9	protein_coding	176680,176929,177283	176811,177133,177522	Gene ID= ENSG00000206172.8 TPM= 35.03 Transcript Type= protein_coding
chr16	188990	229479	188990	229479	-	transcript45.chr16.nic@LUC7L	transcript45.chr16.nic	protein_coding	229279,227242,220649,208601,208078,206004,199062,192927,190541,189968,188990	229479,228402,220747,208664,208188,206147,199238,193015,190570,190135,189339	Gene ID= ENSG00000007392.16 TPM= 6.42 Transcript Type= NA
chr16	188971	229463	188971	229463	-	ENST00000397783.5@LUC7L	ENST00000397783.5	protein_coding	229279,227242,220649,208078,206004,199062,192927,190541,189931,188971	229463,227336,220747,208188,206147,199238,193015,190570,190135,189339	Gene ID= ENSG00000007392.16 TPM= 2.04 Transcript Type= protein_coding
chr16	188990	229449	188990	229449	-	transcript54.chr16.nic@LUC7L	transcript54.chr16.nic	protein_coding	227242,220649,208601,208078,206004,199062,192927,190541,189968,188990	229449,220747,208664,208188,206147,199238,193015,190570,190135,189339	Gene ID= ENSG00000007392.16 TPM= 7.01 Transcript Type= NA
chr16	188969	229450	188969	229450	-	ENST00000293872.12@LUC7L	ENST00000293872.12	protein_coding	229279,227242,220649,208078,206004,199062,192927,190541,189968,188969	229450,227336,220747,208188,206147,199238,193015,190570,190135,189339	Gene ID= ENSG00000007392.16 TPM= 6.71 Transcript Type= protein_coding
chr16	188990	229479	188990	229479	-	transcript56.chr16.nic@LUC7L	transcript56.chr16.nic	protein_coding	229279,227242,220649,208078,206004,199062,192927,190541,189968,188990	229479,228402,220747,208188,206147,199238,193015,190570,190135,189339	Gene ID= ENSG00000007392.16 TPM= 7.01 Transcript Type= NA
chr16	188990	229479	188990	229479	-	transcript57.chr16.nnic@LUC7L	transcript57.chr16.nnic	protein_coding	229279,227242,220681,208078,206004,199062,192927,190541,189968,188990	229479,228402,220747,208188,206147,199238,193015,190570,190135,189339	Gene ID= ENSG00000007392.16 TPM= 2.34 Transcript Type= NA
chr16	189523	229479	189523	229479	-	transcript61.chr16.nic@LUC7L	transcript61.chr16.nic	protein_coding	229279,227242,220649,208601,208078,206004,199062,192927,190541,189523	229479,228402,220747,208664,208188,206147,199238,193015,190570,190135	Gene ID= ENSG00000007392.16 TPM= 2.34 Transcript Type= NA
chr16	188990	229449	188990	229449	-	transcript62.chr16.nic@LUC7L	transcript62.chr16.nic	protein_coding	227242,220649,208078,206004,199062,192927,190541,189968,188990	229449,220747,208188,206147,199238,193015,190570,190135,189339	Gene ID= ENSG00000007392.16 TPM= 6.42 Transcript Type= NA
chr16	188969	229463	188969	229463	-	ENST00000337351.8@LUC7L	ENST00000337351.8	protein_coding	229279,227242,220649,208078,206004,199062,192927,190541,188969	229463,227336,220747,208188,206147,199238,193015,190570,190135	Gene ID= ENSG00000007392.16 TPM= 3.21 Transcript Type= protein_coding
chr16	188990	229451	188990	229451	-	ENST00000490762.5@LUC7L	ENST00000490762.5	protein_coding	229279,227242,220649,208078,206004,199062,192927,190662,190541,189968,188990	229451,228402,220747,208188,206147,199238,193015,190802,190570,190135,189339	Gene ID= ENSG00000007392.16 TPM= 2.34 Transcript Type= retained_intron
chr16	188975	229450	188975	229450	-	ENST00000629543.2@LUC7L	ENST00000629543.2	protein_coding	229279,228333,227242,220649,208078,206004,199062,192927,190541,189968,188975	229450,228402,227336,220747,208188,206147,199238,193015,190570,190135,189339	Gene ID= ENSG00000007392.16 TPM= 4.38 Transcript Type= protein_coding
chr16	189522	191753	189522	191753	-	transcript76.chr16.nnic@NA	transcript76.chr16.nnic	NA	189522	191753	Gene ID= novel_gene_chr16_77 TPM= 2.34 Transcript Type= NA
chr16	234813	266120	234813	266120	+	transcript88.chr16.nic@FAM234A	transcript88.chr16.nic	protein_coding	234813,248244,249549,254381,259483,259969,261384,262093,262424,263262,263700,264016,264614,264811	234857,248397,249654,254681,259599,260160,261514,262225,262553,263402,263775,264171,264716,266120	Gene ID= ENSG00000167930.15 TPM= 60.71 Transcript Type= NA
chr16	234546	266125	234546	266125	+	ENST00000399932.7@FAM234A	ENST00000399932.7	protein_coding	234546,249549,254381,259483,259969,261384,262093,262424,263262,263700,264016,264614,264811	234857,249654,254681,259599,260160,261514,262225,262553,263402,263775,264171,264716,266125	Gene ID= ENSG00000167930.15 TPM= 130.77 Transcript Type= protein_coding
chr16	268319	275958	268319	275958	-	transcript84.chr16.nic@RGS11	transcript84.chr16.nic	protein_coding	275849,275402,275283,274043,273760,273475,272863,271540,271399,271202,270984,270744,270523,269503,268319	275958,275498,275333,275082,273836,273556,272931,271569,271460,271315,271099,270831,270661,269585,269383	Gene ID= ENSG00000076344.15 TPM= 4.47 Transcript Type= NA
chr16	268319	272628	268319	272628	-	transcript103.chr16.nic@RGS11	transcript103.chr16.nic	protein_coding	271540,271399,271202,270984,270744,270523,269503,268319	272628,271460,271315,271099,270831,270661,269585,269383	Gene ID= ENSG00000076344.15 TPM= 3.3 Transcript Type= NA
chr16	268311	275914	268311	275914	-	ENST00000316163.9@RGS11	ENST00000316163.9	protein_coding	275838,275402,275283,274976,274214,274043,273760,273475,272863,271540,271399,271202,270984,270744,270523,269503,268311	275914,275498,275333,275082,274265,274101,273836,273556,272931,271569,271460,271315,271099,270831,270661,269585,269383	Gene ID= ENSG00000076344.15 TPM= 2.14 Transcript Type= protein_coding
chr16	268301	275929	268301	275929	-	ENST00000397770.7@RGS11	ENST00000397770.7	protein_coding	275849,275402,275283,274976,274214,274043,273760,273475,272863,271540,271399,271202,270984,270744,270523,269503,268301	275929,275498,275333,275082,274265,274101,273836,273556,272931,271569,271460,271315,271099,270831,270661,269585,269383	Gene ID= ENSG00000076344.15 TPM= 2.92 Transcript Type= protein_coding
chr16	287441	352730	287441	352730	-	transcript109.chr16.nnic@AXIN1	transcript109.chr16.nnic	protein_coding	352369,347083,314543,309973,304304,297722,297056,293488,291190,289440,287441	352730,347106,314683,310069,304441,298251,297226,293718,291297,289607,288248	Gene ID= ENSG00000103126.14 TPM= 3.5 Transcript Type= NA
chr16	287440	352659	287440	352659	-	ENST00000262320.7@AXIN1	ENST00000262320.7	protein_coding	352369,346148,314543,309973,304304,297722,297056,293488,291190,289440,287440	352659,347106,314683,310069,304441,298251,297226,293718,291297,289607,288248	Gene ID= ENSG00000103126.14 TPM= 26.85 Transcript Type= protein_coding
chr16	290961	294482	290961	294482	+	transcript124.chr16.nnic@NA	transcript124.chr16.nnic	NA	290961	294482	Gene ID= novel_gene_chr16_125 TPM= 3.5 Transcript Type= NA
chr16	340050	343453	340050	343453	-	transcript126.chr16.nnic@NA	transcript126.chr16.nnic	NA	340050	343453	Gene ID= novel_gene_chr16_127 TPM= 2.34 Transcript Type= NA
chr16	346197	351145	346197	351145	+	transcript122.chr16.nnic@NA	transcript122.chr16.nnic	NA	346197	351145	Gene ID= novel_gene_chr16_123 TPM= 4.67 Transcript Type= NA
chr16	367384	370527	367384	370527	-	ENST00000199706.12@MRPL28	ENST00000199706.12	protein_coding	370499,369931,369068,368501,368328,367384	370527,370225,369220,368635,368414,367782	Gene ID= ENSG00000086504.15 TPM= 48.46 Transcript Type= protein_coding
chr16	367384	370509	367384	370509	-	ENST00000483764.5@MRPL28	ENST00000483764.5	protein_coding	370499,369931,368501,368328,367384	370509,370225,369220,368414,367782	Gene ID= ENSG00000086504.15 TPM= 8.76 Transcript Type= retained_intron
chr16	370773	382005	370773	382005	-	transcript140.chr16.nic@TMEM8A	transcript140.chr16.nic	protein_coding	381701,377671,377378,377037,376136,375345,375133,374756,374221,374005,372611,370773	382005,377848,377585,377164,376812,375435,375256,374892,374399,374151,372727,372283	Gene ID= ENSG00000129925.10 TPM= 9.92 Transcript Type= NA
chr16	371864	381977	371864	381977	-	transcript149.chr16.nnic@TMEM8A	transcript149.chr16.nnic	protein_coding	381701,377378,377037,376544,376136,375345,375133,374756,374221,374005,372611,371864	381977,377585,377164,376812,376455,375435,375256,374892,374399,374151,372727,372283	Gene ID= ENSG00000129925.10 TPM= 7.88 Transcript Type= NA
chr16	370773	381982	370773	381982	-	ENST00000431232.6@TMEM8A	ENST00000431232.6	protein_coding	381701,377671,377378,377037,376544,376136,375345,375133,374756,374221,374005,372611,370773	381982,377848,377585,377164,376812,376455,375435,375256,374892,374399,374151,372727,372283	Gene ID= ENSG00000129925.10 TPM= 71.22 Transcript Type= protein_coding
chr16	380374	381974	380374	381974	-	transcript160.chr16.nnic@NA	transcript160.chr16.nnic	NA	380374	381974	Gene ID= novel_gene_chr16_161 TPM= 3.5 Transcript Type= NA
chr16	382106	400633	382106	400633	+	transcript175.chr16.nnic@NME4	transcript175.chr16.nnic	protein_coding	382106,383290,398990,399379,399627,400219	382477,383429,399123,399480,399739,400633	Gene ID= ENSG00000103202.12 TPM= 2.34 Transcript Type= NA
chr16	397192	400753	397192	400753	+	ENST00000620944.4@NME4	ENST00000620944.4	protein_coding	397192,398208,398990,399379,399627,400219	397313,398394,399123,399480,399739,400753	Gene ID= ENSG00000103202.12 TPM= 5.45 Transcript Type= protein_coding
chr16	397192	400753	397192	400753	+	ENST00000621774.4@NME4	ENST00000621774.4	protein_coding	397192,398990,399627,400219	397313,399123,399739,400753	Gene ID= ENSG00000103202.12 TPM= 1.95 Transcript Type= protein_coding
chr16	397209	400759	397209	400759	+	ENST00000219479.6@NME4	ENST00000219479.6	protein_coding	397209,398990,399379,399627,400219	397313,399123,399480,399739,400759	Gene ID= ENSG00000103202.12 TPM= 6.62 Transcript Type= protein_coding
chr16	397209	400506	397209	400506	+	ENST00000382940.8@NME4	ENST00000382940.8	protein_coding	397209,397879,398990,399379,399627,400219	397313,397902,399123,399480,399739,400506	Gene ID= ENSG00000103202.12 TPM= 3.5 Transcript Type= protein_coding
chr16	401826	412487	401826	412487	+	ENST00000219481.9@DECR2	ENST00000219481.9	protein_coding	401826,404956,406346,407425,410243,410691,410972,411361,411890	402043,405024,406397,407560,410367,410784,411076,411578,412487	Gene ID= ENSG00000242612.6 TPM= 7.59 Transcript Type= protein_coding
chr16	401858	412481	401858	412481	+	transcript170.chr16.nic@DECR2	transcript170.chr16.nic	protein_coding	401858,404956,406346,406834,410243,410691,410972,411361,411890	402043,405024,406777,407560,410367,410784,411076,411578,412481	Gene ID= ENSG00000242612.6 TPM= 5.25 Transcript Type= NA
chr16	425619	523011	425619	523011	+	ENST00000262305.8@RAB11FIP3	ENST00000262305.8	protein_coding	425619,461404,471295,482525,488851,496824,503004,505524,510660,518943,519754,520122,520459,520726	426720,461497,471389,482736,489000,496859,503097,505627,510800,519024,519891,520277,520599,523011	Gene ID= ENSG00000090565.15 TPM= 7.01 Transcript Type= protein_coding
chr16	527722	554636	527722	554636	+	transcript219.chr16.nic@CAPN15	transcript219.chr16.nic	protein_coding	527722,533946,546817,548993,549288,549615,551302,551512,552051,552301,552605,552863,553339	528029,533998,548287,549201,549471,549838,551427,551664,552212,552530,552771,553041,554636	Gene ID= ENSG00000103326.11 TPM= 14.59 Transcript Type= NA
chr16	527856	554636	527856	554636	+	ENST00000219611.6@CAPN15	ENST00000219611.6	protein_coding	527856,533946,536029,546817,548993,549288,549615,551302,551512,552051,552301,552605,552863,553339	528029,533998,536142,548287,549201,549471,549838,551427,551664,552212,552530,552771,553041,554636	Gene ID= ENSG00000103326.11 TPM= 50.79 Transcript Type= protein_coding
chr16	538948	544800	538948	544800	-	transcript227.chr16.nnic@NA	transcript227.chr16.nnic	NA	538948	544800	Gene ID= novel_gene_chr16_228 TPM= 22.18 Transcript Type= NA
chr16	569943	584108	569943	584108	+	transcript232.chr16.nic@PIGQ	transcript232.chr16.nic	protein_coding	569943,574066,575839,576134,578379,578785,579069,580183,580858,581199,582248,582883	570096,574763,575970,576254,578505,578938,579180,580263,580972,581341,582309,584108	Gene ID= ENSG00000007541.16 TPM= 11.97 Transcript Type= NA
chr16	569974	584108	569974	584108	+	transcript233.chr16.nic@PIGQ	transcript233.chr16.nic	protein_coding	569974,570648,574066,575839,576134,578379,578785,579069,580183,580858,582248,582883	570096,570760,574763,575970,576254,578505,578938,579180,580263,580972,582309,584108	Gene ID= ENSG00000007541.16 TPM= 7.59 Transcript Type= NA
chr16	569947	584136	569947	584136	+	ENST00000321878.9@PIGQ	ENST00000321878.9	protein_coding	569947,574066,575839,576134,578379,578785,579069,580183,580858,582248,582883	570096,574763,575970,576254,578505,578938,579180,580263,580972,582309,584136	Gene ID= ENSG00000007541.16 TPM= 87.28 Transcript Type= protein_coding
chr16	569943	584108	569943	584108	+	transcript241.chr16.nic@PIGQ	transcript241.chr16.nic	protein_coding	569943,574066,575839,576134,578379,578785,579069,580858,582248,582883	570096,574763,575970,576254,578505,578938,579180,580972,582309,584108	Gene ID= ENSG00000007541.16 TPM= 11.97 Transcript Type= NA
chr16	569943	584109	569943	584109	+	transcript245.chr16.nic@PIGQ	transcript245.chr16.nic	protein_coding	569943,574066,575839,576134,578379,578785,579069,580858,582883	570096,574763,575970,576254,578505,578938,579180,580972,584109	Gene ID= ENSG00000007541.16 TPM= 7.3 Transcript Type= NA
chr16	570018	584109	570018	584109	+	ENST00000026218.9@PIGQ	ENST00000026218.9	protein_coding	570018,574066,575839,576134,578379,578785,579069,580183,580858,582883	570096,574763,575970,576254,578505,578938,579180,580263,580972,584109	Gene ID= ENSG00000007541.16 TPM= 11.68 Transcript Type= protein_coding
chr16	569976	577234	569976	577234	+	ENST00000422307.6@PIGQ	ENST00000422307.6	protein_coding	569976,574066,575839,576134	570096,574763,575970,577234	Gene ID= ENSG00000007541.16 TPM= 8.17 Transcript Type= protein_coding
chr16	581761	584108	581761	584108	+	ENST00000476438.1@PIGQ	ENST00000476438.1	protein_coding	581761,582883	582309,584108	Gene ID= ENSG00000007541.16 TPM= 19.85 Transcript Type= retained_intron
chr16	581762	583742	581762	583742	-	transcript258.chr16.nnic@NA	transcript258.chr16.nnic	NA	581762	583742	Gene ID= novel_gene_chr16_259 TPM= 19.85 Transcript Type= NA
chr16	587772	589274	587772	589274	-	transcript286.chr16.nnic@NA	transcript286.chr16.nnic	NA	587772	589274	Gene ID= novel_gene_chr16_287 TPM= 5.84 Transcript Type= NA
chr16	590036	629271	590036	629271	+	transcript264.chr16.nic@RAB40C	transcript264.chr16.nic	protein_coding	590036,590261,617208,618200,625432,625956,627342	590119,590433,617268,618260,625509,626121,629271	Gene ID= ENSG00000197562.9 TPM= 7.45 Transcript Type= NA
chr16	590064	629271	590064	629271	+	transcript278.chr16.nic@RAB40C	transcript278.chr16.nic	protein_coding	590064,617208,618200,625432,627342	590433,617268,618260,626121,629271	Gene ID= ENSG00000197562.9 TPM= 12.52 Transcript Type= NA
chr16	616810	629271	616810	629271	+	transcript280.chr16.nic@RAB40C	transcript280.chr16.nic	protein_coding	616810,618200,625432,625899,627342	617268,618260,625509,626121,629271	Gene ID= ENSG00000197562.9 TPM= 17.42 Transcript Type= NA
chr16	590083	629271	590083	629271	+	transcript281.chr16.nnic@RAB40C	transcript281.chr16.nnic	protein_coding	590083,625432,625899,627342	590433,625509,626121,629271	Gene ID= ENSG00000197562.9 TPM= 15.09 Transcript Type= NA
chr16	590083	629271	590083	629271	+	transcript283.chr16.nnic@RAB40C	transcript283.chr16.nnic	protein_coding	590083,625432,627342	590433,626121,629271	Gene ID= ENSG00000197562.9 TPM= 11.35 Transcript Type= NA
chr16	590077	629271	590077	629271	+	ENST00000538492.5@RAB40C	ENST00000538492.5	protein_coding	590077,590261,617208,618200,625432,625899,627342	590119,590433,617268,618260,625509,626121,629271	Gene ID= ENSG00000197562.9 TPM= 26.18 Transcript Type= protein_coding
chr16	590089	629272	590089	629272	+	ENST00000248139.7@RAB40C	ENST00000248139.7	protein_coding	590089,617208,618200,625432,625899,627342	590433,617268,618260,625509,626121,629272	Gene ID= ENSG00000197562.9 TPM= 88.36 Transcript Type= protein_coding
chr16	634430	636359	634430	636359	-	transcript293.chr16.nic@METTL26	transcript293.chr16.nic	protein_coding	635612,635281,634889,634719,634430	636359,635340,634956,634797,634644	Gene ID= ENSG00000130731.15 TPM= 3.64 Transcript Type= NA
chr16	634430	636301	634430	636301	-	transcript298.chr16.nic@METTL26	transcript298.chr16.nic	protein_coding	636094,635612,634889,634719,634430	636301,635774,635340,634797,634644	Gene ID= ENSG00000130731.15 TPM= 2.48 Transcript Type= NA
chr16	634427	636366	634427	636366	-	ENST00000614890.4@METTL26	ENST00000614890.4	protein_coding	636094,635612,634889,634719,634427	636366,635774,634956,634797,634644	Gene ID= ENSG00000130731.15 TPM= 1.54 Transcript Type= protein_coding
chr16	634429	636342	634429	636342	-	ENST00000338401.8@METTL26	ENST00000338401.8	protein_coding	636094,634719,634429	636342,634797,634644	Gene ID= ENSG00000130731.15 TPM= 2.72 Transcript Type= protein_coding
chr16	634430	636302	634430	636302	-	ENST00000301686.12@METTL26	ENST00000301686.12	protein_coding	636094,635612,635281,634889,634719,634430	636302,635774,635340,634956,634797,634644	Gene ID= ENSG00000130731.15 TPM= 20.22 Transcript Type= protein_coding
chr16	634430	636302	634430	636302	-	ENST00000397666.6@METTL26	ENST00000397666.6	protein_coding	636094,635612,635281,634719,634430	636302,635774,635340,634797,634644	Gene ID= ENSG00000130731.15 TPM= 8.56 Transcript Type= protein_coding
chr16	634436	636310	634436	636310	-	ENST00000448973.6@METTL26	ENST00000448973.6	protein_coding	634889,634719,634436	636310,634797,634644	Gene ID= ENSG00000130731.15 TPM= 10.65 Transcript Type= retained_intron
chr16	634438	636351	634438	636351	-	ENST00000397664.8@METTL26	ENST00000397664.8	protein_coding	636094,635281,634719,634438	636351,635340,634797,634644	Gene ID= ENSG00000130731.15 TPM= 5.06 Transcript Type= protein_coding
chr16	640212	648474	640212	648474	+	transcript308.chr16.nic@MCRIP2	transcript308.chr16.nic	protein_coding	640212,642120,646472,647417,647783	642043,642249,646608,647544,648474	Gene ID= ENSG00000172366.19 TPM= 4.67 Transcript Type= NA
chr16	641779	648474	641779	648474	+	transcript313.chr16.nnic@MCRIP2	transcript313.chr16.nnic	protein_coding	641779,647417,647783,648120	642043,647544,647884,648474	Gene ID= ENSG00000172366.19 TPM= 3.74 Transcript Type= NA
chr16	642453	648474	642453	648474	+	transcript314.chr16.nnic@MCRIP2	transcript314.chr16.nnic	protein_coding	642453,647417,647783,648120	643144,647544,647884,648474	Gene ID= ENSG00000172366.19 TPM= 2.57 Transcript Type= NA
chr16	642858	648474	642858	648474	+	transcript315.chr16.nic@MCRIP2	transcript315.chr16.nic	protein_coding	642858,647417,647783,648120	646608,647544,647884,648474	Gene ID= ENSG00000172366.19 TPM= 31.76 Transcript Type= NA
chr16	646747	648474	646747	648474	+	ENST00000575894.1@MCRIP2	ENST00000575894.1	protein_coding	646747	648474	Gene ID= ENSG00000172366.19 TPM= 2.34 Transcript Type= retained_intron
chr16	641813	648474	641813	648474	+	ENST00000307650.8@MCRIP2	ENST00000307650.8	protein_coding	641813,642120,647417,647783,648120	642043,642249,647544,647884,648474	Gene ID= ENSG00000172366.19 TPM= 29.42 Transcript Type= protein_coding
chr16	641846	648474	641846	648474	+	ENST00000491999.5@MCRIP2	ENST00000491999.5	protein_coding	641846,642120,646472,647417,647783,648120	642043,642249,646608,647544,647884,648474	Gene ID= ENSG00000172366.19 TPM= 9.57 Transcript Type= nonsense_mediated_decay
chr16	642451	648437	642451	648437	+	ENST00000615744.4@MCRIP2	ENST00000615744.4	protein_coding	642451,646472,647417,647783,648120	643144,646608,647544,647884,648437	Gene ID= ENSG00000172366.19 TPM= 2.34 Transcript Type= processed_transcript
chr16	648473	649200	648473	649200	-	ENST00000455294.1@AL022341.1	ENST00000455294.1	antisense_RNA	648955,648473	649200,648615	Gene ID= ENSG00000228201.1 TPM= 1.17 Transcript Type= antisense_RNA
chr16	668086	674174	668086	674174	+	ENST00000315082.8@RHOT2	ENST00000315082.8	protein_coding	668086,668353,668488,668656,669553,670123,670249,670456,670675,670892,671083,671697,671860,672084,672254,672489,672703,672928,673480	668236,668411,668569,668699,669606,670175,670357,670557,670773,671000,671203,671781,672002,672181,672384,672566,672825,673130,674174	Gene ID= ENSG00000140983.13 TPM= 90.14 Transcript Type= protein_coding
chr16	668086	674125	668086	674125	+	transcript336.chr16.nic@RHOT2	transcript336.chr16.nic	protein_coding	668086,668353,668488,668656,669553,670123,670249,670456,670675,670892,671697,671860,672084,672254,672489,672703,672928,673480	668236,668411,668569,668699,669606,670175,670357,670557,670773,671203,671781,672002,672181,672384,672566,672825,673130,674125	Gene ID= ENSG00000140983.13 TPM= 57.27 Transcript Type= NA
chr16	668086	674125	668086	674125	+	transcript357.chr16.nic@RHOT2	transcript357.chr16.nic	protein_coding	668086,668353,668488,668656,669553,670123,670249,670456,670774,671697,671860,672084,672254,672489,672703,672928,673480	668236,668411,668569,668699,669606,670175,670357,670557,671203,671781,672002,672181,672384,672566,672825,673130,674125	Gene ID= ENSG00000140983.13 TPM= 12.72 Transcript Type= NA
chr16	675666	678268	675666	678268	+	ENST00000352681.7@RHBDL1	ENST00000352681.7	protein_coding	675666,676336,676672,676971,677276,677459,677639,677781	675829,676497,676896,677119,677388,677559,677699,678268	Gene ID= ENSG00000103269.13 TPM= 3.5 Transcript Type= protein_coding
chr16	680224	682746	680224	682746	+	ENST00000565677.5@STUB1	ENST00000565677.5	protein_coding	680224,681063,681438,681793,682020,682165,682364	680684,681350,681603,681880,682076,682281,682746	Gene ID= ENSG00000103266.10 TPM= 8.99 Transcript Type= protein_coding
chr16	680419	682717	680419	682717	+	ENST00000569248.5@STUB1	ENST00000569248.5	protein_coding	680419,681438,681793,682165,682364	681350,681603,682076,682281,682717	Gene ID= ENSG00000103266.10 TPM= 4.67 Transcript Type= retained_intron
chr16	680404	682745	680404	682745	+	transcript460.chr16.nnic@NA	transcript460.chr16.nnic	NA	680404	682745	Gene ID= novel_gene_chr16_461 TPM= 3.5 Transcript Type= NA
chr16	681671	684439	681671	684439	-	ENST00000412368.6@JMJD8	ENST00000412368.6	protein_coding	684234,684066,683861,683685,683530,683322,683167,682953,681671	684439,684155,683909,683781,683598,683441,683234,683087,682874	Gene ID= ENSG00000161999.11 TPM= 129.14 Transcript Type= protein_coding
chr16	681671	684356	681671	684356	-	transcript424.chr16.nic@JMJD8	transcript424.chr16.nic	protein_coding	684234,683861,683685,683530,683322,683167,682953,681671	684356,684155,683781,683598,683441,683234,683087,682874	Gene ID= ENSG00000161999.11 TPM= 17.05 Transcript Type= NA
chr16	681671	684356	681671	684356	-	transcript425.chr16.nic@JMJD8	transcript425.chr16.nic	protein_coding	684234,683910,683685,683530,683322,683167,682953,681671	684356,684155,683781,683598,683441,683234,683087,682874	Gene ID= ENSG00000161999.11 TPM= 11.21 Transcript Type= NA
chr16	681671	684356	681671	684356	-	transcript426.chr16.nic@JMJD8	transcript426.chr16.nic	protein_coding	684234,684066,683685,683530,683322,683167,682953,681671	684356,684155,683909,683598,683441,683234,683087,682874	Gene ID= ENSG00000161999.11 TPM= 10.04 Transcript Type= NA
chr16	681699	684344	681699	684344	-	ENST00000568689.5@JMJD8	ENST00000568689.5	protein_coding	684234,684066,683861,683685,683322,683167,682958,681699	684344,684155,683909,683781,683598,683234,683087,682874	Gene ID= ENSG00000161999.11 TPM= 9.34 Transcript Type= retained_intron
chr16	684622	690400	684622	690400	-	ENST00000293883.8@WDR24	ENST00000293883.8	protein_coding	689160,687562,686744,686068,685869,685679,685257,684992,684622	690400,687739,687416,686186,685990,685783,685597,685176,684902	Gene ID= ENSG00000127580.15 TPM= 81.73 Transcript Type= protein_coding
chr16	692500	695326	692500	695326	-	transcript463.chr16.nnic@FBXL16	transcript463.chr16.nnic	protein_coding	695241,694992,694634,692500	695326,695076,694697,694423	Gene ID= ENSG00000127585.11 TPM= 8.08 Transcript Type= NA
chr16	692500	705829	692500	705829	-	ENST00000397621.5@FBXL16	ENST00000397621.5	protein_coding	705512,696773,695415,694992,694634,692500	705829,697419,695923,695076,694697,694423	Gene ID= ENSG00000127585.11 TPM= 1.46 Transcript Type= protein_coding
chr16	692498	695532	692498	695532	-	ENST00000562648.2@FBXL16	ENST00000562648.2	protein_coding	694992,694634,692498	695532,694697,694423	Gene ID= ENSG00000127585.11 TPM= 4.58 Transcript Type= retained_intron
chr16	715115	719655	715115	719655	+	ENST00000568223.6@METRN	ENST00000568223.6	protein_coding	715115,715584,716933,717071	715393,715984,716992,719655	Gene ID= ENSG00000103260.8 TPM= 10.51 Transcript Type= protein_coding
chr16	721147	722590	721147	722590	+	transcript496.chr16.nic@FAM173A	transcript496.chr16.nic	protein_coding	721147,721801,722084,722309	721702,721941,722134,722590	Gene ID= ENSG00000103254.9 TPM= 4.67 Transcript Type= NA
chr16	721145	722590	721145	722590	+	transcript499.chr16.nic@FAM173A	transcript499.chr16.nic	protein_coding	721145,722084,722309	721941,722134,722590	Gene ID= ENSG00000103254.9 TPM= 2.34 Transcript Type= NA
chr16	721147	722590	721147	722590	+	transcript501.chr16.nic@FAM173A	transcript501.chr16.nic	protein_coding	721147,721801	721702,722590	Gene ID= ENSG00000103254.9 TPM= 2.34 Transcript Type= NA
chr16	721142	722573	721142	722573	+	ENST00000219535.7@FAM173A	ENST00000219535.7	protein_coding	721142,721598,721801,722309	721436,721702,721941,722573	Gene ID= ENSG00000103254.9 TPM= 11.68 Transcript Type= protein_coding
chr16	727107	729715	727107	729715	+	transcript482.chr16.nic@HAGHL	transcript482.chr16.nic	protein_coding	727107,727412,727965,728116,728316,728504,728794,729009,729288	727175,727614,728029,728233,728424,728604,728895,729088,729715	Gene ID= ENSG00000103253.17 TPM= 4.67 Transcript Type= NA
chr16	729766	741009	729766	741009	-	transcript485.chr16.nic@NARFL	transcript485.chr16.nic	protein_coding	740920,739643,737186,736266,733298,732301,731565,730843,729766	741009,739738,737329,736398,734871,732373,731702,731000,730655	Gene ID= ENSG00000103245.13 TPM= 4.09 Transcript Type= NA
chr16	729753	741002	729753	741002	-	ENST00000251588.6@NARFL	ENST00000251588.6	protein_coding	740920,739643,737186,736266,734737,734229,733298,732301,731565,730843,729753	741002,739738,737329,736398,734871,734347,733427,732373,731702,731000,730655	Gene ID= ENSG00000103245.13 TPM= 48.46 Transcript Type= protein_coding
chr16	760698	768862	760698	768862	+	transcript510.chr16.nnic@MSLN	transcript510.chr16.nnic	protein_coding	760698,761006,762672,763233,763642,764023,764647,764907,765110,765527,765691,766059,766335,766668,766885,767376,768379,768648	760821,761174,762765,763276,763691,764143,764726,765036,765303,765617,765790,766237,766490,766810,767012,767470,768565,768862	Gene ID= ENSG00000102854.15 TPM= 21.99 Transcript Type= NA
chr16	760734	768862	760734	768862	+	transcript511.chr16.nnic@MSLN	transcript511.chr16.nnic	protein_coding	760734,761073,762672,763233,763627,764023,764647,764907,765110,765527,765691,766059,766335,766668,766885,767376,768379,768648	760821,761174,762765,763276,763691,764143,764726,765036,765303,765617,765790,766237,766490,766810,767012,767470,768565,768862	Gene ID= ENSG00000102854.15 TPM= 9.31 Transcript Type= NA
chr16	760767	768865	760767	768865	+	ENST00000566549.5@MSLN	ENST00000566549.5	protein_coding	760767,762672,763233,763642,764023,764647,764907,765110,765527,765691,766059,766335,766668,766885,767376,768379,768648	761174,762765,763276,763691,764143,764726,765036,765303,765617,765790,766237,766490,766810,767012,767470,768565,768865	Gene ID= ENSG00000102854.15 TPM= 127.85 Transcript Type= protein_coding
chr16	760765	768858	760765	768858	+	ENST00000545450.6@MSLN	ENST00000545450.6	protein_coding	760765,761073,762672,763233,763642,764023,764647,764907,765110,765527,765691,766059,766335,766668,766885,767376,768379,768648	760821,761174,762765,763276,763691,764143,764726,765036,765303,765617,765790,766237,766490,766810,767012,767470,768565,768858	Gene ID= ENSG00000102854.15 TPM= 56 Transcript Type= protein_coding
chr16	760762	768862	760762	768862	+	ENST00000563941.5@MSLN	ENST00000563941.5	protein_coding	760762,761133,762672,763233,763642,764023,764647,764907,765110,765527,765691,766059,766335,766668,766885,767376,768379,768648	760821,761174,762765,763276,763691,764143,764726,765036,765303,765617,765790,766237,766490,766810,767012,767470,768565,768862	Gene ID= ENSG00000102854.15 TPM= 12.26 Transcript Type= protein_coding
chr16	775803	777653	775803	777653	+	transcript527.chr16.nnic@NA	transcript527.chr16.nnic	NA	775803	777653	Gene ID= novel_gene_chr16_528 TPM= 2.34 Transcript Type= NA
chr16	784974	788379	784974	788379	-	transcript536.chr16.nic@RPUSD1	transcript536.chr16.nic	protein_coding	787354,787077,786827,784974	788379,787179,786928,786377	Gene ID= ENSG00000007376.7 TPM= 11.68 Transcript Type= NA
chr16	784974	788383	784974	788383	-	ENST00000007264.6@RPUSD1	ENST00000007264.6	protein_coding	788256,787556,787354,787077,786827,784974	788383,787744,787477,787179,786928,786377	Gene ID= ENSG00000007376.7 TPM= 30.36 Transcript Type= protein_coding
chr16	784991	788371	784991	788371	-	ENST00000565809.5@RPUSD1	ENST00000565809.5	protein_coding	788256,787556,787354,786827,784991	788371,787744,787477,786928,786377	Gene ID= ENSG00000007376.7 TPM= 2.34 Transcript Type= protein_coding
chr16	788622	798074	788622	798074	+	ENST00000262315.13@CHTF18	ENST00000262315.13	protein_coding	788622,788931,789210,789547,790177,790347,790525,791161,791851,792224,792439,792718,792966,793144,794054,795132,795685,795947,796717,796961,797694,797839	788775,789125,789360,789715,790269,790399,790666,791370,791948,792347,792590,792811,793064,793274,794201,795356,795834,796077,796861,797092,797751,798074	Gene ID= ENSG00000127586.16 TPM= 14.59 Transcript Type= protein_coding
chr16	788620	798074	788620	798074	+	transcript544.chr16.nic@CHTF18	transcript544.chr16.nic	protein_coding	788620,788931,789210,789547,790177,790347,790525,792439,792718,792966,793144,794054,795132,795685,795947,796717,796961,797694,797839	788775,789125,789360,789715,790269,790399,792347,792590,792811,793064,793274,794201,795356,795834,796077,796861,797092,797751,798074	Gene ID= ENSG00000127586.16 TPM= 5.25 Transcript Type= NA
chr16	853634	970999	853634	970999	-	ENST00000262301.15@LMF1	ENST00000262301.15	protein_coding	970788,954357,934244,910931,893007,879570,871161,870729,869883,868944,853634	970999,954666,934254,911079,893072,879737,871341,870882,870066,869056,854706	Gene ID= ENSG00000103227.18 TPM= 8.17 Transcript Type= protein_coding
chr16	854500	970984	854500	970984	-	transcript549.chr16.nnic@LMF1	transcript549.chr16.nnic	protein_coding	970788,954357,934244,910931,893007,879570,871161,870729,869963,868944,854500	970984,954666,934254,911079,893072,879737,871341,870882,870066,869056,854706	Gene ID= ENSG00000103227.18 TPM= 2.34 Transcript Type= NA
chr16	982086	986978	982086	986978	+	ENST00000566034.1@SOX8	ENST00000566034.1	protein_coding	982086,984701	983960,986978	Gene ID= ENSG00000005513.9 TPM= 4.67 Transcript Type= retained_intron
chr16	1228336	1230199	1228336	1230199	-	transcript563.chr16.nnic@TPSB2	transcript563.chr16.nnic	protein_coding	1230162,1229891,1229566,1229191,1228900,1228336	1230199,1229951,1229737,1229429,1229063,1228814	Gene ID= ENSG00000197253.13 TPM= 22.53 Transcript Type= NA
chr16	1228336	1256952	1228336	1256952	-	transcript583.chr16.nnic@TPSB2	transcript583.chr16.nnic	protein_coding	1256835,1229566,1229191,1228900,1228336	1256952,1229611,1229456,1229063,1228814	Gene ID= ENSG00000197253.13 TPM= 14.16 Transcript Type= NA
chr16	1228336	1230184	1228336	1230184	-	ENST00000606293.5@TPSB2	ENST00000606293.5	protein_coding	1230162,1229891,1229566,1229191,1228900,1228336	1230184,1229951,1229737,1229456,1229063,1228814	Gene ID= ENSG00000197253.13 TPM= 230.75 Transcript Type= protein_coding
chr16	1228337	1230162	1228337	1230162	-	ENST00000612142.1@TPSB2	ENST00000612142.1	protein_coding	1229891,1229566,1229191,1228900,1228337	1230162,1229737,1229456,1229063,1228814	Gene ID= ENSG00000197253.13 TPM= 51.57 Transcript Type= protein_coding
chr16	1240691	1242554	1240691	1242554	+	transcript561.chr16.nic@TPSAB1	transcript561.chr16.nic	protein_coding	1240691,1240939,1241153,1241461,1241827,1242076	1240728,1240999,1241324,1241699,1241990,1242554	Gene ID= ENSG00000172236.16 TPM= 20.72 Transcript Type= NA
chr16	1240696	1242554	1240696	1242554	+	ENST00000338844.7@TPSAB1	ENST00000338844.7	protein_coding	1240696,1240939,1241153,1241434,1241827,1242076	1240728,1240999,1241324,1241699,1241990,1242554	Gene ID= ENSG00000172236.16 TPM= 194.11 Transcript Type= protein_coding
chr16	1240724	1242554	1240724	1242554	+	ENST00000461509.6@TPSAB1	ENST00000461509.6	protein_coding	1240724,1241153,1241434,1241827,1242076	1240999,1241324,1241699,1241990,1242554	Gene ID= ENSG00000172236.16 TPM= 78.52 Transcript Type= protein_coding
chr16	1241251	1242516	1241251	1242516	+	ENST00000561736.1@TPSAB1	ENST00000561736.1	protein_coding	1241251,1241461,1241827,1242076	1241324,1241699,1241990,1242516	Gene ID= ENSG00000172236.16 TPM= 1.17 Transcript Type= protein_coding
chr16	1309635	1327018	1309635	1327018	+	ENST00000397515.6@UBE2I	ENST00000397515.6	protein_coding	1309635,1312347,1314020,1314293,1315654,1320174,1320438,1324730	1309773,1312603,1314096,1314376,1315726,1320283,1320517,1327018	Gene ID= ENSG00000103275.19 TPM= 18.68 Transcript Type= protein_coding
chr16	1309636	1317125	1309636	1317125	+	ENST00000473256.6@UBE2I	ENST00000473256.6	protein_coding	1309636,1314020,1314293,1315654	1309773,1314096,1314376,1317125	Gene ID= ENSG00000103275.19 TPM= 2.34 Transcript Type= retained_intron
chr16	1309639	1313525	1309639	1313525	+	transcript609.chr16.nnic@NA	transcript609.chr16.nnic	NA	1309639	1313525	Gene ID= novel_gene_chr16_610 TPM= 22.18 Transcript Type= NA
chr16	1349240	1351911	1349240	1351911	-	ENST00000007390.2@TSR3	ENST00000007390.2	protein_coding	1351693,1351379,1350807,1350058,1349889,1349240	1351911,1351598,1351000,1350234,1349952,1349608	Gene ID= ENSG00000007520.3 TPM= 166.97 Transcript Type= protein_coding
chr16	1349240	1351914	1349240	1351914	-	transcript615.chr16.nic@TSR3	transcript615.chr16.nic	protein_coding	1351693,1351379,1350058,1349889,1349240	1351914,1351598,1351000,1349952,1349608	Gene ID= ENSG00000007520.3 TPM= 5.84 Transcript Type= NA
chr16	1349240	1351914	1349240	1351914	-	transcript616.chr16.nic@TSR3	transcript616.chr16.nic	protein_coding	1351693,1351379,1350807,1350058,1349240	1351914,1351598,1351000,1350234,1349608	Gene ID= ENSG00000007520.3 TPM= 31.53 Transcript Type= NA
chr16	1351940	1363350	1351940	1363350	+	transcript637.chr16.nic@GNPTG	transcript637.chr16.nic	protein_coding	1351940,1352239,1361743,1361872,1362038,1362206,1362452,1362611,1362825,1362997	1352159,1352306,1361797,1361955,1362131,1362320,1362534,1362742,1362906,1363350	Gene ID= ENSG00000090581.9 TPM= 28.49 Transcript Type= NA
chr16	1351951	1352499	1351951	1352499	+	ENST00000527137.2@GNPTG	ENST00000527137.2	protein_coding	1351951,1352102,1352239	1352017,1352159,1352499	Gene ID= ENSG00000090581.9 TPM= 1.17 Transcript Type= protein_coding
chr16	1362994	1364346	1362994	1364346	+	transcript648.chr16.nnic@NA	transcript648.chr16.nnic	NA	1362994	1364346	Gene ID= novel_gene_chr16_649 TPM= 2.34 Transcript Type= NA
chr16	1419744	1420800	1419744	1420800	-	ENST00000442039.2@C16orf91	ENST00000442039.2	protein_coding	1420692,1419744	1420800,1420612	Gene ID= ENSG00000174109.4 TPM= 16.35 Transcript Type= protein_coding
chr16	1419752	1420756	1419752	1420756	-	ENST00000563974.1@C16orf91	ENST00000563974.1	protein_coding	1419752	1420756	Gene ID= ENSG00000174109.4 TPM= 10.51 Transcript Type= retained_intron
chr16	1444935	1475580	1444935	1475580	-	ENST00000382745.8@CLCN7	ENST00000382745.8	protein_coding	1474834,1465267,1461603,1461405,1460816,1460418,1459107,1457694,1457254,1456113,1455731,1455134,1454411,1453834,1452755,1451623,1450497,1449276,1448966,1448681,1448355,1447655,1447392,1447006,1444935	1475580,1465338,1461674,1461470,1460948,1460527,1459187,1457756,1457337,1456206,1455795,1455250,1454465,1453894,1452893,1451716,1450666,1449327,1449093,1448766,1448484,1447714,1447568,1447086,1446717	Gene ID= ENSG00000103249.17 TPM= 61.98 Transcript Type= protein_coding
chr16	1444936	1475084	1444936	1475084	-	ENST00000448525.5@CLCN7	ENST00000448525.5	protein_coding	1474834,1461603,1461405,1460816,1460418,1459107,1457694,1457254,1456113,1455731,1455134,1454411,1453834,1452755,1451623,1450497,1449276,1448966,1448681,1448355,1447655,1447392,1447006,1444936	1475084,1461674,1461470,1460948,1460527,1459187,1457756,1457337,1456206,1455795,1455250,1454465,1453894,1452893,1451716,1450666,1449327,1449093,1448766,1448484,1447714,1447568,1447086,1446717	Gene ID= ENSG00000103249.17 TPM= 24.03 Transcript Type= protein_coding
chr16	1445344	1475057	1445344	1475057	-	ENST00000262318.12@CLCN7	ENST00000262318.12	protein_coding	1474834,1461603,1461405,1460816,1460418,1459107,1457694,1457254,1456113,1455731,1455134,1454411,1453834,1452755,1451623,1450497,1449276,1448966,1448681,1448355,1447655,1447388,1447006,1445344	1475057,1461674,1461470,1460948,1460527,1459187,1457756,1457337,1456206,1455795,1455250,1454465,1453894,1452893,1451716,1450666,1449327,1449093,1448766,1448484,1447714,1447568,1447083,1446717	Gene ID= ENSG00000103249.17 TPM= 79.69 Transcript Type= protein_coding
chr16	1493563	1510457	1493563	1510457	+	transcript687.chr16.nnic@TELO2	transcript687.chr16.nnic	protein_coding	1493563,1494246,1495346,1497036,1497361,1499231,1500096,1500347,1500563,1501420,1501663,1502047,1502313,1502645,1502931,1505410,1506238,1506484,1506952,1507306,1507601,1509830	1493605,1494616,1495623,1497104,1497508,1499333,1500164,1500488,1500699,1501499,1501773,1502135,1502404,1502761,1503002,1505601,1506329,1506665,1507051,1507370,1507716,1510457	Gene ID= ENSG00000100726.14 TPM= 4.67 Transcript Type= NA
chr16	1493351	1510457	1493351	1510457	+	transcript691.chr16.nic@TELO2	transcript691.chr16.nic	protein_coding	1493351,1494246,1495346,1497036,1497361,1499231,1500096,1500347,1500563,1501420,1501663,1502047,1502313,1502645,1502931,1505410,1506238,1506484,1507306,1507601,1509830	1493605,1494616,1495623,1497104,1497508,1499333,1500164,1500488,1500699,1501499,1501773,1502135,1502404,1502761,1503002,1505601,1506329,1507051,1507370,1507716,1510457	Gene ID= ENSG00000100726.14 TPM= 13.81 Transcript Type= NA
chr16	1493380	1510457	1493380	1510457	+	transcript696.chr16.nic@TELO2	transcript696.chr16.nic	protein_coding	1493380,1494281,1495346,1497036,1497361,1499231,1500096,1500347,1500563,1501420,1501663,1502047,1502313,1502645,1502931,1505410,1506238,1506484,1507306,1507601,1509830	1493605,1494616,1495623,1497104,1497508,1499333,1500164,1500488,1500699,1501499,1501773,1502135,1502404,1502761,1503002,1505601,1506329,1507051,1507370,1507716,1510457	Gene ID= ENSG00000100726.14 TPM= 4.47 Transcript Type= NA
chr16	1493380	1510457	1493380	1510457	+	transcript697.chr16.nic@TELO2	transcript697.chr16.nic	protein_coding	1493380,1494281,1495346,1497036,1497361,1499231,1500096,1500347,1500563,1501420,1501663,1502047,1502313,1502645,1502931,1505410,1506238,1506952,1507306,1507601,1509830	1493605,1494616,1495623,1497104,1497508,1499333,1500164,1500488,1500699,1501499,1501773,1502135,1502404,1502761,1503002,1505601,1506329,1507051,1507370,1507716,1510457	Gene ID= ENSG00000100726.14 TPM= 8.17 Transcript Type= NA
chr16	1493558	1510457	1493558	1510457	+	transcript705.chr16.nnic@TELO2	transcript705.chr16.nnic	protein_coding	1493558,1494246,1495346,1497036,1497361,1499231,1500096,1500347,1500563,1501663,1502047,1502313,1502645,1502931,1505410,1506238,1506484,1507306,1507601,1509830	1493605,1494616,1495623,1497104,1497508,1499333,1500164,1500488,1500699,1501773,1502135,1502404,1502761,1503002,1505601,1506329,1507051,1507370,1507716,1510457	Gene ID= ENSG00000100726.14 TPM= 5.06 Transcript Type= NA
chr16	1493363	1510457	1493363	1510457	+	ENST00000262319.10@TELO2	ENST00000262319.10	protein_coding	1493363,1494246,1495346,1497036,1497361,1499231,1500096,1500347,1500563,1501420,1501663,1502047,1502313,1502645,1502931,1505410,1506238,1506952,1507306,1507601,1509830	1493605,1494616,1495623,1497104,1497508,1499333,1500164,1500488,1500699,1501499,1501773,1502135,1502404,1502761,1503002,1505601,1506329,1507051,1507370,1507716,1510457	Gene ID= ENSG00000100726.14 TPM= 77.06 Transcript Type= protein_coding
chr16	1506534	1510457	1506534	1510457	+	ENST00000568240.1@TELO2	ENST00000568240.1	protein_coding	1506534,1507306,1507601,1509830	1507051,1507370,1507716,1510457	Gene ID= ENSG00000100726.14 TPM= 2.34 Transcript Type= retained_intron
chr16	1510427	1612110	1510427	1612110	-	ENST00000426508.6@IFT140	ENST00000426508.6	protein_coding	1611968,1610664,1607120,1602370,1592467,1592176,1589605,1587933,1587198,1586130,1584217,1583314,1580759,1571407,1568217,1566161,1563997,1561985,1557935,1526619,1525887,1525231,1524784,1524552,1523828,1523518,1520602,1520131,1519881,1518216,1510427	1612110,1610853,1607297,1602591,1592588,1592318,1589780,1588024,1587304,1586275,1584420,1583386,1580850,1571534,1568334,1566291,1564162,1562116,1558134,1526796,1526077,1525326,1524916,1524695,1523956,1523700,1520808,1520343,1520047,1518357,1511150	Gene ID= ENSG00000187535.13 TPM= 46.7 Transcript Type= protein_coding
chr16	1533573	1555580	1533573	1555580	+	ENST00000566264.1@TMEM204	ENST00000566264.1	protein_coding	1533573,1541921,1554782	1534555,1542076,1555580	Gene ID= ENSG00000131634.13 TPM= 319.92 Transcript Type= protein_coding
chr16	1536604	1539022	1536604	1539022	-	transcript737.chr16.nnic@NA	transcript737.chr16.nnic	NA	1536604	1539022	Gene ID= novel_gene_chr16_738 TPM= 2.34 Transcript Type= NA
chr16	1551249	1555566	1551249	1555566	+	transcript735.chr16.nnic@NA	transcript735.chr16.nnic	NA	1551249	1555566	Gene ID= novel_gene_chr16_736 TPM= 2.34 Transcript Type= NA
chr16	1678256	1702086	1678256	1702086	+	ENST00000248098.7@JPT2	ENST00000248098.7	protein_coding	1678256,1685439,1691843,1697812,1698811	1678356,1685587,1691985,1697860,1702086	Gene ID= ENSG00000206053.12 TPM= 12.84 Transcript Type= protein_coding
chr16	1770344	1771561	1770344	1771561	-	ENST00000563498.1@NME3	ENST00000563498.1	protein_coding	1771280,1771070,1770881,1770344	1771561,1771171,1770993,1770766	Gene ID= ENSG00000103024.7 TPM= 1.55 Transcript Type= protein_coding
chr16	1770335	1771538	1770335	1771538	-	ENST00000561637.5@NME3	ENST00000561637.5	protein_coding	1771070,1770881,1770335	1771538,1770993,1770766	Gene ID= ENSG00000103024.7 TPM= 9.73 Transcript Type= retained_intron
chr16	1770342	1771510	1770342	1771510	-	ENST00000568561.5@NME3	ENST00000568561.5	protein_coding	1771489,1771280,1771070,1770881,1770342	1771510,1771410,1771191,1770993,1770766	Gene ID= ENSG00000103024.7 TPM= 8.56 Transcript Type= nonsense_mediated_decay
chr16	1770377	1771557	1770377	1771557	-	ENST00000566600.1@NME3	ENST00000566600.1	protein_coding	1771489,1771070,1770881,1770377	1771557,1771410,1770993,1770766	Gene ID= ENSG00000103024.7 TPM= 4.67 Transcript Type= retained_intron
chr16	1770342	1773157	1770342	1773157	-	transcript752.chr16.nic@MRPS34	transcript752.chr16.nic	protein_coding	1772799,1772604,1770881,1770342	1773157,1772646,1772513,1770766	Gene ID= ENSG00000074071.14 TPM= 4.67 Transcript Type= NA
chr16	1771890	1773155	1771890	1773155	-	ENST00000397375.6@MRPS34	ENST00000397375.6	protein_coding	1772799,1772604,1771890	1773155,1772646,1772513	Gene ID= ENSG00000074071.14 TPM= 119.88 Transcript Type= protein_coding
chr16	1771895	1773157	1771895	1773157	-	transcript761.chr16.nic@MRPS34	transcript761.chr16.nic	protein_coding	1772799,1771895	1773157,1772646	Gene ID= ENSG00000074071.14 TPM= 8.96 Transcript Type= NA
chr16	1771890	1773150	1771890	1773150	-	ENST00000177742.7@MRPS34	ENST00000177742.7	protein_coding	1772799,1772604,1771890	1773150,1772646,1772534	Gene ID= ENSG00000074071.14 TPM= 8.96 Transcript Type= protein_coding
chr16	1776712	1782820	1776712	1782820	-	ENST00000566339.5@SPSB3	ENST00000566339.5	protein_coding	1782502,1781358,1778435,1778134,1777946,1777747,1776712	1782820,1781495,1778612,1778321,1778048,1777872,1777443	Gene ID= ENSG00000162032.15 TPM= 91.15 Transcript Type= protein_coding
chr16	1776722	1782594	1776722	1782594	-	ENST00000563741.5@SPSB3	ENST00000563741.5	protein_coding	1782502,1781358,1777946,1777747,1776722	1782594,1781495,1778612,1777872,1777443	Gene ID= ENSG00000162032.15 TPM= 14.44 Transcript Type= retained_intron
chr16	1776718	1782557	1776718	1782557	-	ENST00000567868.5@SPSB3	ENST00000567868.5	protein_coding	1782502,1781358,1778134,1777946,1777747,1776718	1782557,1781495,1778612,1778048,1777872,1777443	Gene ID= ENSG00000162032.15 TPM= 82.05 Transcript Type= retained_intron
chr16	1776718	1782552	1776718	1782552	-	ENST00000569380.5@SPSB3	ENST00000569380.5	protein_coding	1782502,1781358,1777747,1776718	1782552,1781495,1778612,1777443	Gene ID= ENSG00000162032.15 TPM= 10.24 Transcript Type= retained_intron
chr16	1782901	1789191	1782901	1789191	+	ENST00000262302.13@NUBP2	ENST00000262302.13	protein_coding	1782901,1786537,1786757,1787677,1787941,1788138,1788569	1783036,1786655,1786955,1787831,1788051,1788207,1789191	Gene ID= ENSG00000095906.16 TPM= 90.49 Transcript Type= protein_coding
chr16	1782932	1789181	1782932	1789181	+	ENST00000568834.5@NUBP2	ENST00000568834.5	protein_coding	1782932,1786537,1787677,1787941,1788138,1788569	1783036,1786655,1787831,1788051,1788207,1789181	Gene ID= ENSG00000095906.16 TPM= 17.51 Transcript Type= nonsense_mediated_decay
chr16	1782932	1789183	1782932	1789183	+	ENST00000567700.5@NUBP2	ENST00000567700.5	protein_coding	1782932,1786537,1787941,1788138,1788569	1783036,1787831,1788051,1788207,1789183	Gene ID= ENSG00000095906.16 TPM= 6.42 Transcript Type= retained_intron
chr16	1790413	1793763	1790413	1793763	-	ENST00000215539.3@IGFALS	ENST00000215539.3	protein_coding	1793637,1790413	1793763,1792401	Gene ID= ENSG00000099769.5 TPM= 5.84 Transcript Type= protein_coding
chr16	1807633	1827194	1807633	1827194	-	ENST00000397356.7@HAGH	ENST00000397356.7	protein_coding	1826712,1822865,1822300,1819897,1819115,1817168,1816893,1809754,1807633	1827194,1823037,1822364,1820014,1819223,1817271,1816994,1809833,1809382	Gene ID= ENSG00000063854.12 TPM= 35.32 Transcript Type= protein_coding
chr16	1809103	1827159	1809103	1827159	-	transcript770.chr16.nic@HAGH	transcript770.chr16.nic	protein_coding	1826712,1826507,1822865,1819897,1819115,1817168,1816893,1809754,1809103	1827159,1826602,1823037,1822364,1819223,1817271,1816994,1809833,1809382	Gene ID= ENSG00000063854.12 TPM= 6.13 Transcript Type= NA
chr16	1809103	1826841	1809103	1826841	-	ENST00000397353.6@HAGH	ENST00000397353.6	protein_coding	1826712,1826507,1822865,1822300,1819897,1819115,1817168,1816893,1809754,1809103	1826841,1826602,1823037,1822364,1820014,1819223,1817271,1816994,1809833,1809382	Gene ID= ENSG00000063854.12 TPM= 72.1 Transcript Type= protein_coding
chr16	1826967	1840207	1826967	1840207	+	ENST00000382666.5@FAHD1	ENST00000382666.5	protein_coding	1826967,1838016,1839262	1827865,1838134,1840207	Gene ID= ENSG00000180185.11 TPM= 1.17 Transcript Type= protein_coding
chr16	1826941	1828914	1826941	1828914	+	ENST00000427358.3@FAHD1	ENST00000427358.3	protein_coding	1826941	1828914	Gene ID= ENSG00000180185.11 TPM= 26.85 Transcript Type= protein_coding
chr16	1938210	1943326	1938210	1943326	-	ENST00000361871.7@MSRB1	ENST00000361871.7	protein_coding	1943102,1941257,1940778,1938210	1943326,1941405,1940892,1939143	Gene ID= ENSG00000198736.11 TPM= 88.74 Transcript Type= protein_coding
chr16	1959508	1961975	1959508	1961975	+	ENST00000268668.10@NDUFB10	ENST00000268668.10	protein_coding	1959508,1961153,1961497,1961797	1959754,1961291,1961636,1961975	Gene ID= ENSG00000140990.14 TPM= 49.04 Transcript Type= protein_coding
chr16	1959543	1961975	1959543	1961975	+	ENST00000543683.6@NDUFB10	ENST00000543683.6	protein_coding	1959543,1961153,1961497	1959754,1961291,1961975	Gene ID= ENSG00000140990.14 TPM= 1.17 Transcript Type= protein_coding
chr16	1962052	1964860	1962052	1964860	-	ENST00000343262.8@RPS2	ENST00000343262.8	protein_coding	1964807,1964449,1964276,1963149,1962736,1962497,1962052	1964860,1964628,1964365,1963256,1962909,1962656,1962270	Gene ID= ENSG00000140988.15 TPM= 2936.3 Transcript Type= protein_coding
chr16	1962061	1964631	1962061	1964631	-	ENST00000527871.5@RPS2	ENST00000527871.5	protein_coding	1964449,1964276,1962497,1962061	1964631,1964365,1963256,1962270	Gene ID= ENSG00000140988.15 TPM= 3.5 Transcript Type= retained_intron
chr16	1964959	1965509	1964959	1965509	+	ENST00000531523.1@SNHG9	ENST00000531523.1	lincRNA	1964959,1965406	1965129,1965509	Gene ID= ENSG00000255198.4 TPM= 16.35 Transcript Type= lincRNA
chr16	1971655	1971896	1971655	1971896	-	ENST00000618631.1@AC005363.2	ENST00000618631.1	lincRNA	1971655	1971896	Gene ID= ENSG00000277602.1 TPM= 1.17 Transcript Type= lincRNA
chr16	1972086	1978684	1972086	1978684	+	ENST00000569628.5@TBL3	ENST00000569628.5	protein_coding	1972086,1974056,1974376,1974538,1974763,1974928,1975187,1975345,1975529,1975808,1976056,1976211,1976814,1977054,1977356,1977514,1977742,1977958,1978149,1978313,1978552	1972205,1974292,1974423,1974679,1974847,1975098,1975262,1975438,1975710,1975949,1976114,1976314,1976961,1977284,1977426,1977670,1977800,1978061,1978220,1978471,1978684	Gene ID= ENSG00000183751.14 TPM= 24.52 Transcript Type= retained_intron
chr16	1984034	1986111	1984034	1986111	+	transcript860.chr16.nnic@NA	transcript860.chr16.nnic	NA	1984034	1986111	Gene ID= novel_gene_chr16_861 TPM= 4.67 Transcript Type= NA
chr16	1984213	1987749	1984213	1987749	+	ENST00000248114.6@GFER	ENST00000248114.6	protein_coding	1984213,1984747,1985866	1984476,1984943,1987749	Gene ID= ENSG00000127554.12 TPM= 14.01 Transcript Type= protein_coding
chr16	1997654	2009823	1997654	2009823	-	ENST00000563630.5@ZNF598	ENST00000563630.5	protein_coding	2009524,2003616,2002991,2002521,2002206,2001583,2001004,2000391,1999496,1998965,1998702,1997654	2009823,2003728,2003120,2002732,2002423,2001700,2001191,2000481,2000256,1999121,1998852,1998585	Gene ID= ENSG00000167962.13 TPM= 24.52 Transcript Type= protein_coding
chr16	2026868	2039026	2026868	2039026	+	ENST00000424542.6@SLC9A3R2	ENST00000424542.6	protein_coding	2026868,2029582,2036324,2036728,2036955,2037538,2037826	2027218,2029782,2036503,2036881,2036998,2037600,2039026	Gene ID= ENSG00000065054.13 TPM= 28.26 Transcript Type= protein_coding
chr16	2026928	2038489	2026928	2038489	+	ENST00000432365.6@SLC9A3R2	ENST00000432365.6	protein_coding	2026928,2029582,2036324,2036728,2036955,2037538,2037859	2027218,2029782,2036503,2036881,2036998,2037600,2038489	Gene ID= ENSG00000065054.13 TPM= 98.31 Transcript Type= protein_coding
chr16	2033271	2038421	2033271	2038421	+	ENST00000566198.1@SLC9A3R2	ENST00000566198.1	protein_coding	2033271,2036324,2036728,2036955,2037538,2037826	2033432,2036503,2036881,2036998,2037600,2038421	Gene ID= ENSG00000065054.13 TPM= 3.5 Transcript Type= protein_coding
chr16	2032011	2037326	2032011	2037326	-	transcript902.chr16.nnic@NA	transcript902.chr16.nnic	NA	2034402,2032011	2037326,2034328	Gene ID= novel_gene_chr16_903 TPM= 8.17 Transcript Type= NA
chr16	2039815	2047866	2039815	2047866	-	ENST00000219066.5@NTHL1	ENST00000219066.5	protein_coding	2047709,2046128,2044630,2043567,2040133,2039815	2047866,2046366,2044800,2043726,2040238,2040047	Gene ID= ENSG00000065057.7 TPM= 23.94 Transcript Type= protein_coding
chr16	2039820	2047826	2039820	2047826	-	transcript933.chr16.nic@NTHL1	transcript933.chr16.nic	protein_coding	2046128,2044630,2043567,2040133,2039820	2047826,2044800,2043726,2040238,2040047	Gene ID= ENSG00000065057.7 TPM= 4.09 Transcript Type= NA
chr16	2039820	2044051	2039820	2044051	-	transcript937.chr16.nnic@NTHL1	transcript937.chr16.nnic	protein_coding	2043822,2043567,2040133,2039820	2044051,2043726,2040238,2040047	Gene ID= ENSG00000065057.7 TPM= 2.34 Transcript Type= NA
chr16	2039823	2043803	2039823	2043803	-	ENST00000567727.5@NTHL1	ENST00000567727.5	protein_coding	2043567,2040133,2039823	2043803,2040238,2040047	Gene ID= ENSG00000065057.7 TPM= 1.17 Transcript Type= retained_intron
chr16	2039820	2047786	2039820	2047786	-	ENST00000566380.5@NTHL1	ENST00000566380.5	protein_coding	2047709,2046128,2043567,2040133,2039820	2047786,2046366,2043726,2040241,2040047	Gene ID= ENSG00000065057.7 TPM= 1.17 Transcript Type= protein_coding
chr16	2041445	2042184	2041445	2042184	-	transcript939.chr16.nnic@NA	transcript939.chr16.nnic	NA	2041445	2042184	Gene ID= novel_gene_chr16_940 TPM= 2.34 Transcript Type= NA
chr16	2047986	2088703	2047986	2088703	+	transcript904.chr16.nic@TSC2	transcript904.chr16.nic	protein_coding	2047986,2048587,2050400,2053342,2054296,2055402,2056196,2056644,2057105,2058747,2060670,2061871,2062497,2062972,2064272,2065519,2070456,2071510,2071784,2072241,2072849,2074200,2075799,2076068,2076491,2079032,2079276,2079557,2080165,2081595,2083695,2084228,2084951,2085230,2086193,2086732,2087863,2088048,2088227,2088446	2048065,2048753,2050486,2053452,2054440,2055519,2056244,2056769,2057178,2058873,2060813,2062008,2062600,2063053,2064427,2065635,2070578,2071616,2071934,2072363,2072983,2074389,2075892,2076170,2076585,2079196,2079428,2079669,2080377,2081798,2083816,2084715,2085026,2085322,2086379,2086871,2087941,2088139,2088325,2088703	Gene ID= ENSG00000103197.16 TPM= 21.02 Transcript Type= NA
chr16	2077149	2088703	2077149	2088703	+	transcript918.chr16.nic@TSC2	transcript918.chr16.nic	protein_coding	2077149,2079276,2079557,2080165,2081595,2083695,2084228,2084951,2085230,2086193,2086732,2087863,2088048,2088227,2088446	2079196,2079428,2079669,2080377,2081798,2083816,2084715,2085026,2085322,2086379,2086871,2087941,2088139,2088325,2088703	Gene ID= ENSG00000103197.16 TPM= 12.84 Transcript Type= NA
chr16	2078735	2088703	2078735	2088703	+	transcript919.chr16.nic@TSC2	transcript919.chr16.nic	protein_coding	2078735,2079276,2079557,2080165,2081595,2083695,2084228,2084951,2085230,2086193,2086732,2087863,2088048,2088227,2088446	2079196,2079428,2079669,2080377,2082504,2083816,2084715,2085026,2085322,2086379,2086871,2087941,2088139,2088325,2088703	Gene ID= ENSG00000103197.16 TPM= 12.65 Transcript Type= NA
chr16	2047989	2088702	2047989	2088702	+	ENST00000401874.6@TSC2	ENST00000401874.6	protein_coding	2047989,2048587,2050400,2053342,2054296,2055402,2056196,2056644,2057105,2058747,2060670,2061871,2062497,2062972,2064272,2065519,2070456,2071510,2071784,2072241,2072849,2074200,2075799,2076068,2076491,2079035,2079276,2079557,2080165,2081595,2083695,2084228,2084951,2085230,2086193,2086732,2087863,2088048,2088227,2088446	2048065,2048753,2050486,2053452,2054440,2055519,2056244,2056769,2057178,2058873,2060813,2062008,2062600,2063053,2064427,2065635,2070578,2071616,2071934,2072363,2072983,2074389,2075892,2076170,2076585,2079196,2079428,2079669,2080377,2081798,2083816,2084715,2085026,2085322,2086379,2086871,2087941,2088139,2088325,2088702	Gene ID= ENSG00000103197.16 TPM= 32.89 Transcript Type= protein_coding
chr16	2154797	2155358	2154797	2155358	-	ENST00000563192.1@SNHG19	ENST00000563192.1	lincRNA	2155143,2154797	2155358,2154922	Gene ID= ENSG00000260260.1 TPM= 12.84 Transcript Type= lincRNA
chr16	2170357	2178060	2170357	2178060	+	transcript963.chr16.nic@TRAF7	transcript963.chr16.nic	protein_coding	2170357,2171264,2171572,2172191,2172465,2173182,2173481,2173788,2173921,2174251,2175111,2175301,2175500,2175834,2176049,2176265,2176560	2170730,2171356,2171605,2172374,2172599,2173399,2173554,2173836,2174048,2174333,2175150,2175417,2175622,2175953,2176180,2176384,2178060	Gene ID= ENSG00000131653.12 TPM= 9.92 Transcript Type= NA
chr16	2155765	2178129	2155765	2178129	+	ENST00000326181.10@TRAF7	ENST00000326181.10	protein_coding	2155765,2163883,2165879,2168077,2170614,2171264,2171572,2172191,2172465,2173182,2173481,2173788,2173921,2174251,2175111,2175301,2175500,2175834,2176049,2176265,2176560	2155858,2164001,2165936,2168168,2170730,2171356,2171605,2172374,2172599,2173399,2173554,2173836,2174048,2174333,2175150,2175417,2175622,2175953,2176180,2176384,2178129	Gene ID= ENSG00000131653.12 TPM= 31.53 Transcript Type= protein_coding
chr16	2205741	2209397	2205741	2209397	+	ENST00000397124.5@MLST8	ENST00000397124.5	protein_coding	2205741,2206031,2206358,2206497,2207035,2207193,2208210,2208450,2208759	2205875,2206214,2206409,2206659,2207110,2207345,2208334,2208613,2209397	Gene ID= ENSG00000167965.17 TPM= 12.14 Transcript Type= protein_coding
chr16	2205743	2209397	2205743	2209397	+	transcript977.chr16.nic@MLST8	transcript977.chr16.nic	protein_coding	2205743,2206031,2206358,2206497,2207035,2207193,2208450,2208759	2205875,2206214,2206409,2206659,2207110,2207345,2208613,2209397	Gene ID= ENSG00000167965.17 TPM= 3.97 Transcript Type= NA
chr16	2205494	2209412	2205494	2209412	+	ENST00000301724.14@MLST8	ENST00000301724.14	protein_coding	2205494,2206031,2206358,2206497,2207035,2207193,2208210,2208450	2205512,2206214,2206409,2206659,2207110,2207345,2208334,2209412	Gene ID= ENSG00000167965.17 TPM= 5.14 Transcript Type= protein_coding
chr16	2205471	2209397	2205471	2209397	+	ENST00000568194.5@MLST8	ENST00000568194.5	protein_coding	2205471,2206358,2206497,2207035,2207193,2208210,2208450,2208759	2206214,2206409,2206659,2207110,2207345,2208334,2208613,2209397	Gene ID= ENSG00000167965.17 TPM= 15.65 Transcript Type= retained_intron
chr16	2205731	2209416	2205731	2209416	+	ENST00000566835.5@MLST8	ENST00000566835.5	protein_coding	2205731,2206061,2206358,2206497,2207035,2207193,2208450,2208759	2205875,2206214,2206409,2206659,2207110,2207345,2208613,2209416	Gene ID= ENSG00000167965.17 TPM= 6.31 Transcript Type= nonsense_mediated_decay
chr16	2209253	2214852	2209253	2214852	-	transcript987.chr16.nic@BRICD5	transcript987.chr16.nic	protein_coding	2214138,2210783,2210522,2210126,2209950,2209553,2209253	2214852,2214053,2210650,2210281,2210051,2209706,2209456	Gene ID= ENSG00000182685.7 TPM= 7.68 Transcript Type= NA
chr16	2209253	2214852	2209253	2214852	-	transcript992.chr16.nic@BRICD5	transcript992.chr16.nic	protein_coding	2214138,2210783,2210522,2209950,2209553,2209253	2214852,2214053,2210650,2210281,2209706,2209456	Gene ID= ENSG00000182685.7 TPM= 6.52 Transcript Type= NA
chr16	2211990	2214852	2211990	2214852	-	transcript994.chr16.nnic@PGP	transcript994.chr16.nnic	protein_coding	2214138,2213581,2211990	2214852,2214053,2213091	Gene ID= ENSG00000184207.8 TPM= 5.84 Transcript Type= NA
chr16	2211997	2214807	2211997	2214807	-	ENST00000333503.7@PGP	ENST00000333503.7	protein_coding	2214138,2211997	2214807,2214053	Gene ID= ENSG00000184207.8 TPM= 22.18 Transcript Type= protein_coding
chr16	2223605	2235742	2223605	2235742	+	transcript1000.chr16.nnic@E4F1	transcript1000.chr16.nnic	protein_coding	2223605,2228372,2229570,2232171,2232456,2232756,2233011,2233438,2233882,2234171,2234583,2234859,2235081,2235216	2223770,2228523,2229675,2232364,2232576,2232908,2233183,2233647,2233990,2234388,2234781,2234971,2235143,2235742	Gene ID= ENSG00000167967.15 TPM= 2.53 Transcript Type= NA
chr16	2223607	2235741	2223607	2235741	+	transcript1005.chr16.nic@E4F1	transcript1005.chr16.nic	protein_coding	2223607,2228372,2229570,2232171,2232456,2232756,2233011,2233438,2233882,2234171,2234583,2234859,2235081	2223770,2228523,2229675,2232364,2232576,2232908,2233183,2233647,2233990,2234388,2234781,2235001,2235741	Gene ID= ENSG00000167967.15 TPM= 3.7 Transcript Type= NA
chr16	2223560	2235742	2223560	2235742	+	transcript1006.chr16.nic@E4F1	transcript1006.chr16.nic	protein_coding	2223560,2228372,2229570,2232171,2232456,2232756,2233011,2233438,2233882,2234171,2234583,2234859,2235216	2223770,2228523,2229675,2232364,2232576,2232908,2233183,2233647,2233990,2234388,2234781,2235143,2235742	Gene ID= ENSG00000167967.15 TPM= 4.87 Transcript Type= NA
chr16	2223571	2235742	2223571	2235742	+	transcript1007.chr16.nic@E4F1	transcript1007.chr16.nic	protein_coding	2223571,2228372,2229570,2232171,2232456,2232756,2233011,2233438,2233882,2234171,2234583,2235081,2235216	2223770,2228523,2229675,2232364,2232576,2232908,2233183,2233647,2233990,2234388,2235001,2235143,2235742	Gene ID= ENSG00000167967.15 TPM= 4.29 Transcript Type= NA
chr16	2223566	2235742	2223566	2235742	+	ENST00000301727.8@E4F1	ENST00000301727.8	protein_coding	2223566,2228372,2229570,2232171,2232456,2232756,2233011,2233438,2233882,2234171,2234583,2234859,2235081,2235216	2223770,2228523,2229675,2232364,2232576,2232908,2233183,2233647,2233990,2234388,2234781,2235001,2235143,2235742	Gene ID= ENSG00000167967.15 TPM= 56.83 Transcript Type= protein_coding
chr16	2223594	2235742	2223594	2235742	+	ENST00000564139.5@E4F1	ENST00000564139.5	protein_coding	2223594,2228372,2229570,2232171,2232456,2232756,2233011,2233438,2233882,2234171,2234583,2234859,2235081,2235216	2223770,2228523,2229675,2232364,2232576,2232908,2233183,2233647,2233990,2234388,2234781,2234949,2235143,2235742	Gene ID= ENSG00000167967.15 TPM= 2.53 Transcript Type= protein_coding
chr16	2241680	2251634	2241680	2251634	-	transcript1048.chr16.nic@ECI1	transcript1048.chr16.nic	protein_coding	2251515,2251316,2246859,2244406,2243318,2241680	2251634,2251429,2246986,2244552,2243439,2243224	Gene ID= ENSG00000167969.12 TPM= 2.34 Transcript Type= NA
chr16	2253117	2267851	2253117	2267851	-	transcript1030.chr16.nic@RNPS1	transcript1030.chr16.nic	protein_coding	2267575,2264573,2264176,2263096,2262740,2262278,2255585,2253117	2267851,2264760,2264331,2263287,2262842,2262431,2255726,2254063	Gene ID= ENSG00000205937.11 TPM= 16.64 Transcript Type= NA
chr16	2253116	2268412	2253116	2268412	-	ENST00000320225.9@RNPS1	ENST00000320225.9	protein_coding	2268055,2264573,2264176,2263096,2262740,2262278,2255585,2253116	2268412,2264760,2264331,2263287,2262842,2262431,2255726,2254063	Gene ID= ENSG00000205937.11 TPM= 66.26 Transcript Type= protein_coding
chr16	2253117	2268397	2253117	2268397	-	ENST00000566458.5@RNPS1	ENST00000566458.5	protein_coding	2268055,2264176,2263096,2262740,2262278,2255585,2253117	2268397,2264331,2263287,2262842,2262431,2255726,2254063	Gene ID= ENSG00000205937.11 TPM= 101.87 Transcript Type= protein_coding
chr16	2253116	2267848	2253116	2267848	-	ENST00000397086.6@RNPS1	ENST00000397086.6	protein_coding	2267663,2264573,2264176,2263096,2262740,2262278,2255585,2253116	2267848,2264760,2264331,2263287,2262842,2262431,2255726,2254063	Gene ID= ENSG00000205937.11 TPM= 27.73 Transcript Type= protein_coding
chr16	2265488	2267839	2265488	2267839	-	transcript1068.chr16.nnic@NA	transcript1068.chr16.nnic	NA	2265488	2267839	Gene ID= novel_gene_chr16_1069 TPM= 2.34 Transcript Type= NA
chr16	2270742	2273115	2270742	2273115	+	transcript1064.chr16.nnic@NA	transcript1064.chr16.nnic	NA	2270742	2273115	Gene ID= novel_gene_chr16_1065 TPM= 5.84 Transcript Type= NA
chr16	2275881	2340735	2275881	2340735	-	ENST00000301732.9@ABCA3	ENST00000301732.9	protein_coding	2340573,2329648,2328453,2326413,2326010,2324404,2323523,2319581,2317648,2317283,2308450,2303969,2300005,2299403,2298386,2297766,2297329,2295590,2292140,2289434,2288026,2286694,2285442,2284779,2284279,2283186,2281381,2281027,2278943,2278288,2277879,2277597,2275881	2340735,2329854,2328757,2326492,2326274,2324531,2323688,2319840,2317764,2317403,2308623,2304150,2300148,2299532,2298540,2297921,2297539,2295740,2292238,2289620,2288329,2286967,2285646,2284998,2284437,2283358,2281509,2281221,2279130,2278458,2278069,2277670,2276805	Gene ID= ENSG00000167972.13 TPM= 1499.19 Transcript Type= protein_coding
chr16	2323339	2329724	2323339	2329724	-	ENST00000567910.1@ABCA3	ENST00000567910.1	protein_coding	2329648,2328453,2326413,2326010,2324404,2323339	2329724,2328757,2326492,2326274,2324531,2323688	Gene ID= ENSG00000167972.13 TPM= 2.34 Transcript Type= protein_coding
chr16	2429394	2458854	2429394	2458854	+	ENST00000397066.8@CCNF	ENST00000397066.8	protein_coding	2429394,2431130,2432961,2435806,2437129,2438070,2439353,2439749,2443649,2445458,2448855,2449282,2449828,2453210,2453410,2455395,2456545	2429497,2431284,2433067,2435873,2437322,2438123,2439457,2439826,2443800,2445622,2448978,2449462,2449915,2453309,2453537,2455564,2458854	Gene ID= ENSG00000162063.12 TPM= 8.17 Transcript Type= protein_coding
chr16	2475051	2505734	2475051	2505734	+	ENST00000567020.6@TBC1D24	ENST00000567020.6	protein_coding	2475051,2496034,2498238,2499357,2499835,2500268,2500804	2475170,2497113,2498396,2499420,2499930,2500490,2505734	Gene ID= ENSG00000162065.12 TPM= 24.52 Transcript Type= protein_coding
chr16	2513870	2520218	2513870	2520218	+	ENST00000330398.8@ATP6V0C	ENST00000330398.8	protein_coding	2513870,2519218,2519541	2514182,2519401,2520218	Gene ID= ENSG00000185883.11 TPM= 255.9 Transcript Type= protein_coding
chr16	2518999	2520218	2518999	2520218	+	ENST00000564973.1@ATP6V0C	ENST00000564973.1	protein_coding	2518999,2519541	2519401,2520218	Gene ID= ENSG00000185883.11 TPM= 11.87 Transcript Type= protein_coding
chr16	2513949	2514775	2513949	2514775	-	transcript1153.chr16.nnic@NA	transcript1153.chr16.nnic	NA	2513949	2514775	Gene ID= novel_gene_chr16_1154 TPM= 2.34 Transcript Type= NA
chr16	2516099	2518430	2516099	2518430	-	transcript1151.chr16.nnic@NA	transcript1151.chr16.nnic	NA	2516099	2518430	Gene ID= novel_gene_chr16_1152 TPM= 33.86 Transcript Type= NA
chr16	2520340	2531420	2520340	2531420	+	transcript1105.chr16.nic@AMDHD2	transcript1105.chr16.nic	protein_coding	2520340,2520769,2520984,2527561,2527773,2528060,2528236,2528452,2528650,2528994	2520541,2520905,2521123,2527615,2527985,2528148,2528380,2528559,2528718,2531420	Gene ID= ENSG00000162066.14 TPM= 7.94 Transcript Type= NA
chr16	2520340	2529731	2520340	2529731	+	transcript1106.chr16.nnic@AMDHD2	transcript1106.chr16.nnic	protein_coding	2520340,2520769,2520984,2527561,2527773,2528060,2528236,2528452,2528650,2529475	2520541,2520905,2521123,2527615,2527985,2528148,2528380,2528559,2528718,2529731	Gene ID= ENSG00000162066.14 TPM= 3.5 Transcript Type= NA
chr16	2520359	2531422	2520359	2531422	+	transcript1113.chr16.nic@AMDHD2	transcript1113.chr16.nic	protein_coding	2520359,2520984,2527561,2527773,2528060,2528236,2528452,2528650,2528994,2529475	2520541,2521123,2527615,2527985,2528148,2528380,2528559,2528718,2529095,2531422	Gene ID= ENSG00000162066.14 TPM= 7.94 Transcript Type= NA
chr16	2520365	2529698	2520365	2529698	+	ENST00000293971.10@AMDHD2	ENST00000293971.10	protein_coding	2520365,2520769,2520984,2527561,2527773,2528060,2528236,2528452,2528650,2528994,2529475	2520541,2520905,2521123,2527615,2527985,2528148,2528380,2528559,2528718,2529095,2529698	Gene ID= ENSG00000162066.14 TPM= 19.85 Transcript Type= protein_coding
chr16	2520365	2531422	2520365	2531422	+	ENST00000302956.8@AMDHD2	ENST00000302956.8	protein_coding	2520365,2520769,2520984,2527561,2527773,2528060,2528236,2528452,2528994,2529475	2520541,2520905,2521123,2527615,2527985,2528148,2528380,2528718,2529095,2531422	Gene ID= ENSG00000162066.14 TPM= 16.11 Transcript Type= protein_coding
chr16	2522846	2524522	2522846	2524522	-	transcript1155.chr16.nnic@NA	transcript1155.chr16.nnic	NA	2522846	2524522	Gene ID= novel_gene_chr16_1156 TPM= 3.5 Transcript Type= NA
chr16	2537982	2597928	2537982	2597928	+	transcript1086.chr16.nnic@PDPK1	transcript1086.chr16.nnic	protein_coding	2537982,2556110,2557703,2561480,2561771,2565553,2566356,2577425,2581295,2581607,2583412,2586676,2595793,2597123,2597651	2538136,2556186,2557963,2561522,2561908,2565697,2566453,2577500,2581363,2581703,2583585,2586893,2595850,2597275,2597928	Gene ID= ENSG00000140992.18 TPM= 2.34 Transcript Type= NA
chr16	2537985	2603188	2537985	2603188	+	transcript1088.chr16.nic@PDPK1	transcript1088.chr16.nic	protein_coding	2537985,2538619,2557703,2561480,2561771,2565553,2566356,2577425,2581295,2581607,2583412,2586676,2595793,2597123,2597651	2538136,2538771,2557963,2561522,2561908,2565697,2566453,2577500,2581363,2581703,2583585,2586893,2595850,2597275,2603188	Gene ID= ENSG00000140992.18 TPM= 29.97 Transcript Type= NA
chr16	2537964	2603188	2537964	2603188	+	ENST00000342085.8@PDPK1	ENST00000342085.8	protein_coding	2537964,2557703,2561480,2561771,2565553,2566356,2577425,2581295,2581607,2583412,2586676,2595793,2597123,2597651	2538136,2557963,2561522,2561908,2565697,2566453,2577500,2581363,2581703,2583585,2586893,2595850,2597275,2603188	Gene ID= ENSG00000140992.18 TPM= 33.47 Transcript Type= protein_coding
chr16	2550556	2603188	2550556	2603188	+	transcript1097.chr16.nic@PDPK1	transcript1097.chr16.nic	protein_coding	2550556,2557703,2561480,2561771,2565553,2566356,2577425,2581295,2581607,2583412,2586676,2595793,2597123,2597651	2550709,2557963,2561522,2561908,2565697,2566453,2577500,2581363,2581703,2583585,2586893,2595850,2597275,2603188	Gene ID= ENSG00000140992.18 TPM= 31.14 Transcript Type= NA
chr16	2603350	2630494	2603350	2630494	+	ENST00000399702.5@AC141586.1	ENST00000399702.5	transcribed_unprocessed_pseudogene	2603350,2610462,2613960,2628825	2603727,2611052,2614068,2630494	Gene ID= ENSG00000215154.6 TPM= 2.34 Transcript Type= processed_transcript
chr16	2661149	2673441	2661149	2673441	-	ENST00000568395.1@ERVK13-1	ENST00000568395.1	processed_transcript	2673283,2669411,2661149	2673441,2672570,2663407	Gene ID= ENSG00000260565.6 TPM= 3.5 Transcript Type= lincRNA
chr16	2682475	2709030	2682475	2709030	+	ENST00000301738.8@KCTD5	ENST00000301738.8	protein_coding	2682475,2695935,2697906,2699821,2702353,2707298	2682800,2696043,2697997,2699916,2702478,2709030	Gene ID= ENSG00000167977.8 TPM= 59.55 Transcript Type= protein_coding
chr16	2712418	2720215	2712418	2720215	-	ENST00000302641.7@PRSS27	ENST00000302641.7	protein_coding	2720115,2716500,2715718,2714065,2713529,2712418	2720215,2716526,2715880,2714336,2713698,2712814	Gene ID= ENSG00000172382.9 TPM= 1.17 Transcript Type= protein_coding
chr16	2752329	2771412	2752329	2771412	+	ENST00000301740.12@SRRM2	ENST00000301740.12	protein_coding	2752329,2756334,2757472,2757781,2758470,2758985,2759140,2759352,2759569,2760301,2761561,2768997,2770352,2770604,2770858	2752846,2756606,2757579,2757945,2758547,2759047,2759172,2759402,2759661,2760499,2768261,2769284,2770465,2770717,2771412	Gene ID= ENSG00000167978.16 TPM= 315.83 Transcript Type= protein_coding
chr16	2752638	2761707	2752638	2761707	+	ENST00000575009.5@SRRM2	ENST00000575009.5	protein_coding	2752638,2757472,2757781,2758470,2758985,2759140,2759352,2759569,2760301,2761561	2752846,2757579,2757945,2758547,2759047,2759172,2759402,2759661,2760499,2761707	Gene ID= ENSG00000167978.16 TPM= 6.42 Transcript Type= protein_coding
chr16	2752714	2758524	2752714	2758524	+	ENST00000576415.5@SRRM2	ENST00000576415.5	protein_coding	2752714,2757472,2757781,2758470	2752846,2757579,2757945,2758524	Gene ID= ENSG00000167978.16 TPM= 3.5 Transcript Type= protein_coding
chr16	2771414	2777297	2771414	2777297	-	ENST00000409906.8@ELOB	ENST00000409906.8	protein_coding	2777237,2776993,2775451,2771414	2777297,2777127,2775556,2772102	Gene ID= ENSG00000103363.14 TPM= 14.01 Transcript Type= protein_coding
chr16	2771943	2777272	2771943	2777272	-	ENST00000572954.1@ELOB	ENST00000572954.1	protein_coding	2777237,2776993,2771943	2777272,2777127,2772102	Gene ID= ENSG00000103363.14 TPM= 5.84 Transcript Type= protein_coding
chr16	2817180	2821719	2817180	2821719	+	ENST00000450020.7@PRSS21	ENST00000450020.7	protein_coding	2817180,2817430,2817801,2818677,2820955,2821366	2817332,2817456,2817966,2818969,2821067,2821719	Gene ID= ENSG00000007038.10 TPM= 5.84 Transcript Type= protein_coding
chr16	2817227	2821719	2817227	2821719	+	ENST00000005995.7@PRSS21	ENST00000005995.7	protein_coding	2817227,2817430,2817801,2818677,2820955,2821366	2817332,2817456,2817966,2818969,2821109,2821719	Gene ID= ENSG00000007038.10 TPM= 23.35 Transcript Type= protein_coding
chr16	2819891	2821717	2819891	2821717	+	transcript1190.chr16.nnic@NA	transcript1190.chr16.nnic	NA	2819891	2821717	Gene ID= novel_gene_chr16_1191 TPM= 4.67 Transcript Type= NA
chr16	2830169	2832284	2830169	2832284	+	ENST00000382280.7@ZG16B	ENST00000382280.7	protein_coding	2830169,2830415,2830694,2831796	2830328,2830493,2830796,2832284	Gene ID= ENSG00000162078.11 TPM= 1.17 Transcript Type= protein_coding
chr16	2852727	2858170	2852727	2858170	-	ENST00000161006.7@PRSS22	ENST00000161006.7	protein_coding	2858023,2856822,2856082,2855574,2853865,2852727	2858170,2856848,2856253,2855851,2854022,2853329	Gene ID= ENSG00000005001.9 TPM= 1.17 Transcript Type= protein_coding
chr16	2883257	2899382	2883257	2899382	+	transcript1207.chr16.nic@FLYWCH2	transcript1207.chr16.nic	protein_coding	2883257,2896352,2899049	2883366,2896771,2899382	Gene ID= ENSG00000162076.12 TPM= 3.89 Transcript Type= NA
chr16	2883186	2899382	2883186	2899382	+	ENST00000396958.7@FLYWCH2	ENST00000396958.7	protein_coding	2883186,2895220,2896352,2899049	2883366,2895320,2896771,2899382	Gene ID= ENSG00000162076.12 TPM= 26.07 Transcript Type= protein_coding
chr16	2883213	2899382	2883213	2899382	+	ENST00000293981.10@FLYWCH2	ENST00000293981.10	protein_coding	2883213,2895220,2896352,2899049	2883272,2895320,2896771,2899382	Gene ID= ENSG00000162076.12 TPM= 2.72 Transcript Type= protein_coding
chr16	2911817	2949809	2911817	2949809	+	transcript1212.chr16.nnic@FLYWCH1	transcript1212.chr16.nnic	protein_coding	2911817,2914176,2915411,2929613,2930410,2933130,2933716,2937121,2938184,2940032,2948688	2912154,2914289,2915476,2930010,2930880,2933582,2933979,2937384,2938456,2940092,2949809	Gene ID= ENSG00000059122.16 TPM= 25.69 Transcript Type= NA
chr16	2936525	2949811	2936525	2949811	+	ENST00000574985.1@FLYWCH1	ENST00000574985.1	protein_coding	2936525,2938184,2940032,2948688	2937384,2938456,2940092,2949811	Gene ID= ENSG00000059122.16 TPM= 19.85 Transcript Type= retained_intron
chr16	2972791	2980539	2972791	2980539	-	ENST00000262300.12@PKMYT1	ENST00000262300.12	protein_coding	2980286,2979648,2976664,2975319,2974550,2974245,2974000,2973138,2972791	2980539,2979912,2977031,2975812,2974656,2974417,2974157,2973215,2973064	Gene ID= ENSG00000127564.16 TPM= 1.17 Transcript Type= protein_coding
chr16	2972849	2980439	2972849	2980439	-	ENST00000574730.5@PKMYT1	ENST00000574730.5	protein_coding	2980286,2979648,2976664,2975319,2974550,2974245,2974000,2973138,2972849	2980439,2979912,2976824,2975812,2974656,2974417,2974157,2973215,2973064	Gene ID= ENSG00000127564.16 TPM= 1.17 Transcript Type= protein_coding
chr16	2969245	2973489	2969245	2973489	+	ENST00000318782.8@PAQR4	ENST00000318782.8	protein_coding	2969245,2971157,2971515	2969840,2971378,2973489	Gene ID= ENSG00000162073.13 TPM= 33.86 Transcript Type= protein_coding
chr16	3004184	3006649	3004184	3006649	+	transcript1234.chr16.nnic@AC004233.3	transcript1234.chr16.nnic	lincRNA	3004184,3006220	3004879,3006649	Gene ID= ENSG00000272079.2 TPM= 2.34 Transcript Type= NA
chr16	3004184	3007388	3004184	3007388	+	transcript1236.chr16.nnic@AC004233.3	transcript1236.chr16.nnic	lincRNA	3004184,3006220	3004879,3007388	Gene ID= ENSG00000272079.2 TPM= 8.17 Transcript Type= NA
chr16	3006120	3007388	3006120	3007388	+	ENST00000607794.2@AC004233.3	ENST00000607794.2	lincRNA	3006120	3007388	Gene ID= ENSG00000272079.2 TPM= 1.17 Transcript Type= lincRNA
chr16	3020312	3022383	3020312	3022383	+	ENST00000326577.8@TNFRSF12A	ENST00000326577.8	protein_coding	3020312,3021215,3021555,3021771	3020491,3021319,3021689,3022383	Gene ID= ENSG00000006327.13 TPM= 143.61 Transcript Type= protein_coding
chr16	3020390	3022383	3020390	3022383	+	ENST00000571351.1@TNFRSF12A	ENST00000571351.1	protein_coding	3020390,3021555,3021771	3021319,3021689,3022383	Gene ID= ENSG00000006327.13 TPM= 15.18 Transcript Type= retained_intron
chr16	3020359	3022383	3020359	3022383	+	ENST00000341627.5@TNFRSF12A	ENST00000341627.5	protein_coding	3020359,3021555,3021771	3020491,3021689,3022383	Gene ID= ENSG00000006327.13 TPM= 10.51 Transcript Type= protein_coding
chr16	3020368	3022381	3020368	3022381	+	transcript1279.chr16.nnic@NA	transcript1279.chr16.nnic	NA	3020368	3022381	Gene ID= novel_gene_chr16_1280 TPM= 4.67 Transcript Type= NA
chr16	3022625	3024269	3022625	3024269	-	ENST00000576921.1@HCFC1R1	ENST00000576921.1	protein_coding	3024181,3023233,3022625	3024269,3023968,3022998	Gene ID= ENSG00000103145.10 TPM= 2.63 Transcript Type= retained_intron
chr16	3022620	3024246	3022620	3024246	-	ENST00000248089.7@HCFC1R1	ENST00000248089.7	protein_coding	3023847,3023474,3023233,3022620	3024246,3023530,3023361,3022998	Gene ID= ENSG00000103145.10 TPM= 28.31 Transcript Type= protein_coding
chr16	3022625	3023961	3022625	3023961	-	ENST00000574151.5@HCFC1R1	ENST00000574151.5	protein_coding	3023847,3023233,3022625	3023961,3023361,3022998	Gene ID= ENSG00000103145.10 TPM= 4.38 Transcript Type= protein_coding
chr16	3022626	3024215	3022626	3024215	-	ENST00000573095.1@HCFC1R1	ENST00000573095.1	protein_coding	3024181,3023847,3023233,3022626	3024215,3023968,3023530,3022998	Gene ID= ENSG00000103145.10 TPM= 9.05 Transcript Type= retained_intron
chr16	3024022	3027754	3024022	3027754	+	transcript1242.chr16.nic@THOC6	transcript1242.chr16.nic	protein_coding	3024022,3025708,3025924,3026365,3026516,3026679,3026867,3027011,3027170,3027366,3027577	3024365,3025823,3026288,3026413,3026587,3026781,3026916,3027073,3027280,3027500,3027754	Gene ID= ENSG00000131652.13 TPM= 9.34 Transcript Type= NA
chr16	3024022	3027754	3024022	3027754	+	transcript1245.chr16.nic@THOC6	transcript1245.chr16.nic	protein_coding	3024022,3025708,3025924,3026516,3026679,3026867,3027011,3027170,3027366,3027577	3024365,3025823,3026413,3026587,3026781,3026916,3027073,3027280,3027500,3027754	Gene ID= ENSG00000131652.13 TPM= 5.84 Transcript Type= NA
chr16	3027682	3036957	3027682	3036957	-	transcript1247.chr16.nnic@BICDL2	transcript1247.chr16.nnic	protein_coding	3036894,3035215,3030935,3030696,3030449,3029545,3029280,3028700,3028348,3027682	3036957,3035510,3031150,3030812,3030595,3029739,3029429,3028830,3028468,3028273	Gene ID= ENSG00000162069.14 TPM= 10.51 Transcript Type= NA
chr16	3027684	3033002	3027684	3033002	-	ENST00000573514.5@BICDL2	ENST00000573514.5	protein_coding	3030935,3030696,3030449,3029545,3029280,3028700,3028348,3027684	3033002,3030812,3030595,3029739,3029429,3028830,3028468,3028273	Gene ID= ENSG00000162069.14 TPM= 11.68 Transcript Type= protein_coding
chr16	3027712	3036926	3027712	3036926	-	ENST00000572449.5@BICDL2	ENST00000572449.5	protein_coding	3036894,3035215,3030935,3030696,3030449,3029545,3029280,3028700,3028348,3027712	3036926,3035526,3031150,3030812,3030595,3029739,3029429,3028830,3028468,3028273	Gene ID= ENSG00000162069.14 TPM= 23.35 Transcript Type= protein_coding
chr16	3056378	3060726	3056378	3060726	+	transcript1281.chr16.nnic@MMP25	transcript1281.chr16.nnic	protein_coding	3056378,3057308,3057531,3058179,3058412,3058827	3057209,3057394,3057613,3058333,3058669,3060726	Gene ID= ENSG00000008516.16 TPM= 12.84 Transcript Type= NA
chr16	3052123	3054050	3052123	3054050	-	transcript1285.chr16.nnic@NA	transcript1285.chr16.nnic	NA	3052123	3054050	Gene ID= novel_gene_chr16_1286 TPM= 5.84 Transcript Type= NA
chr16	3065297	3069667	3065297	3069667	+	ENST00000325568.9@IL32	ENST00000325568.9	protein_coding	3065297,3065784,3067377,3067554,3067984,3068180,3068990	3065494,3065826,3067415,3067613,3068010,3068239,3069667	Gene ID= ENSG00000008517.16 TPM= 10.51 Transcript Type= protein_coding
chr16	3065384	3069728	3065384	3069728	+	ENST00000525643.6@IL32	ENST00000525643.6	protein_coding	3065384,3065784,3067377,3067554,3067984,3068180,3068990	3065687,3065826,3067415,3067613,3068010,3068239,3069728	Gene ID= ENSG00000008517.16 TPM= 19.85 Transcript Type= protein_coding
chr16	3065369	3069551	3065369	3069551	+	ENST00000440815.7@IL32	ENST00000440815.7	protein_coding	3065369,3065781,3067377,3067554,3067984,3068180,3068990	3065494,3065826,3067415,3067613,3068010,3068239,3069551	Gene ID= ENSG00000008517.16 TPM= 16.35 Transcript Type= protein_coding
chr16	3065369	3069543	3065369	3069543	+	ENST00000526464.6@IL32	ENST00000526464.6	protein_coding	3065369,3067377,3067554,3067984,3068180,3068990	3065826,3067415,3067613,3068010,3068239,3069543	Gene ID= ENSG00000008517.16 TPM= 3.5 Transcript Type= protein_coding
chr16	3065614	3069532	3065614	3069532	+	ENST00000533097.6@IL32	ENST00000533097.6	protein_coding	3065614,3065784,3067377,3067554,3067984,3068180,3068990	3065655,3065826,3067415,3067613,3068010,3068239,3069532	Gene ID= ENSG00000008517.16 TPM= 3.5 Transcript Type= protein_coding
chr16	3065662	3069514	3065662	3069514	+	ENST00000548476.5@IL32	ENST00000548476.5	protein_coding	3065662,3067377,3067984,3068180,3068990	3065826,3067613,3068010,3068239,3069514	Gene ID= ENSG00000008517.16 TPM= 1.17 Transcript Type= protein_coding
chr16	3112560	3120517	3112560	3120517	+	ENST00000382192.7@ZNF205	ENST00000382192.7	protein_coding	3112560,3113349,3115355,3115829,3116427,3118905,3119256	3112682,3113487,3115568,3115920,3116547,3119015,3120517	Gene ID= ENSG00000122386.10 TPM= 14.01 Transcript Type= protein_coding
chr16	3131296	3133729	3131296	3133729	+	transcript1308.chr16.nnic@NA	transcript1308.chr16.nnic	NA	3131296	3133729	Gene ID= novel_gene_chr16_1309 TPM= 4.67 Transcript Type= NA
chr16	3135028	3142805	3135028	3142805	+	ENST00000396878.7@ZNF213	ENST00000396878.7	protein_coding	3135028,3137166,3138418,3138745,3138975,3140689	3135387,3137679,3138541,3138818,3139098,3142805	Gene ID= ENSG00000085644.13 TPM= 12.84 Transcript Type= protein_coding
chr16	3222325	3235456	3222325	3235456	-	ENST00000414144.6@ZNF200	ENST00000414144.6	protein_coding	3234987,3233506,3232833,3232421,3222325	3235456,3233836,3232921,3232547,3224613	Gene ID= ENSG00000010539.11 TPM= 2.34 Transcript Type= protein_coding
chr16	3222342	3235457	3222342	3235457	-	ENST00000396871.8@ZNF200	ENST00000396871.8	protein_coding	3235112,3233506,3232833,3232421,3222342	3235457,3233836,3232921,3232547,3224610	Gene ID= ENSG00000010539.11 TPM= 1.17 Transcript Type= protein_coding
chr16	3223336	3235186	3223336	3235186	-	ENST00000396870.8@ZNF200	ENST00000396870.8	protein_coding	3234636,3233506,3232833,3232421,3223336	3235186,3233836,3232921,3232547,3224610	Gene ID= ENSG00000010539.11 TPM= 1.17 Transcript Type= protein_coding
chr16	3242028	3256627	3242028	3256627	-	ENST00000219596.5@MEFV	ENST00000219596.5	protein_coding	3256311,3254158,3249431,3248909,3247016,3246525,3244473,3244254,3243860,3242028	3256627,3254790,3249780,3249004,3247246,3246547,3244588,3244286,3243892,3243694	Gene ID= ENSG00000103313.12 TPM= 4.67 Transcript Type= protein_coding
chr16	3263743	3267567	3263743	3267567	+	ENST00000573951.1@LINC00921	ENST00000573951.1	lincRNA	3263743,3267126	3265768,3267567	Gene ID= ENSG00000281005.1 TPM= 4.67 Transcript Type= lincRNA
chr16	3283013	3301401	3283013	3301401	+	transcript1325.chr16.nic@ZNF263	transcript1325.chr16.nic	protein_coding	3283013,3285059,3285681,3286023,3288454,3289393,3299106,3300913	3284205,3285239,3285754,3286149,3288570,3290553,3299156,3301401	Gene ID= ENSG00000006194.9 TPM= 2.34 Transcript Type= NA
chr16	3282943	3291460	3282943	3291460	+	ENST00000219069.5@ZNF263	ENST00000219069.5	protein_coding	3282943,3285059,3285681,3286023,3288454,3289393	3284205,3285239,3285754,3286149,3288570,3291460	Gene ID= ENSG00000006194.9 TPM= 14.4 Transcript Type= protein_coding
chr16	3283463	3291460	3283463	3291460	+	transcript1343.chr16.nnic@ZNF263	transcript1343.chr16.nnic	protein_coding	3283463,3285059,3286023,3288454,3289393	3284205,3285239,3286149,3288570,3291460	Gene ID= ENSG00000006194.9 TPM= 3.89 Transcript Type= NA
chr16	3283504	3301401	3283504	3301401	+	transcript1349.chr16.nic@ZNF263	transcript1349.chr16.nic	protein_coding	3283504,3289393,3299106,3300913	3284205,3290553,3299156,3301401	Gene ID= ENSG00000006194.9 TPM= 2.34 Transcript Type= NA
chr16	3283470	3291460	3283470	3291460	+	transcript1350.chr16.nic@ZNF263	transcript1350.chr16.nic	protein_coding	3283470,3286023,3288454,3289393	3284205,3286149,3288570,3291460	Gene ID= ENSG00000006194.9 TPM= 3.89 Transcript Type= NA
chr16	3283503	3301400	3283503	3301400	+	transcript1354.chr16.nic@ZNF263	transcript1354.chr16.nic	protein_coding	3283503,3289393,3299106	3284205,3290553,3301400	Gene ID= ENSG00000006194.9 TPM= 2.34 Transcript Type= NA
chr16	3298832	3305411	3298832	3305411	-	transcript1363.chr16.nnic@TIGD7	transcript1363.chr16.nnic	protein_coding	3305212,3298832	3305411,3300627	Gene ID= ENSG00000140993.10 TPM= 2.34 Transcript Type= NA
chr16	3298832	3305645	3298832	3305645	-	ENST00000396862.1@TIGD7	ENST00000396862.1	protein_coding	3305212,3298832	3305645,3302009	Gene ID= ENSG00000140993.10 TPM= 10.51 Transcript Type= protein_coding
chr16	3305464	3318574	3305464	3318574	+	transcript1326.chr16.nic@ZNF75A	transcript1326.chr16.nic	protein_coding	3305464,3308313,3311753,3312677,3313049,3316912,3317190	3305643,3308836,3311948,3312768,3313175,3317022,3318574	Gene ID= ENSG00000162086.14 TPM= 8.17 Transcript Type= NA
chr16	3305406	3318574	3305406	3318574	+	ENST00000498240.6@ZNF75A	ENST00000498240.6	protein_coding	3305406,3308313,3311753,3312677,3316912,3317190	3305643,3308836,3311948,3312768,3317022,3318574	Gene ID= ENSG00000162086.14 TPM= 1.17 Transcript Type= processed_transcript
chr16	3305493	3318574	3305493	3318574	+	transcript1339.chr16.nnic@ZNF75A	transcript1339.chr16.nnic	protein_coding	3305493,3308313,3311753,3312677,3316912,3317190	3306406,3308836,3311948,3312768,3317022,3318574	Gene ID= ENSG00000162086.14 TPM= 2.34 Transcript Type= NA
chr16	3305486	3318852	3305486	3318852	+	ENST00000574298.5@ZNF75A	ENST00000574298.5	protein_coding	3305486,3311753,3312677,3313049,3316912,3317190	3305643,3311948,3312768,3313175,3317022,3318852	Gene ID= ENSG00000162086.14 TPM= 2.34 Transcript Type= protein_coding
chr16	3305464	3309313	3305464	3309313	+	transcript1360.chr16.nic@ZNF75A	transcript1360.chr16.nic	protein_coding	3305464,3308313	3305643,3309313	Gene ID= ENSG00000162086.14 TPM= 2.34 Transcript Type= NA
chr16	3305464	3309481	3305464	3309481	+	transcript1361.chr16.nic@ZNF75A	transcript1361.chr16.nic	protein_coding	3305464,3308313	3305643,3309481	Gene ID= ENSG00000162086.14 TPM= 11.68 Transcript Type= NA
chr16	3382085	3401029	3382085	3401029	-	transcript1368.chr16.nic@ZSCAN32	transcript1368.chr16.nic	protein_coding	3400945,3397192,3393649,3390423,3390010,3384459,3382085	3401029,3397744,3393814,3390517,3390183,3384941,3383711	Gene ID= ENSG00000140987.19 TPM= 3.74 Transcript Type= NA
chr16	3382085	3401029	3382085	3401029	-	transcript1369.chr16.nic@ZSCAN32	transcript1369.chr16.nic	protein_coding	3400945,3397192,3390423,3390010,3384459,3382085	3401029,3397744,3390517,3390133,3384941,3383711	Gene ID= ENSG00000140987.19 TPM= 2.57 Transcript Type= NA
chr16	3382085	3401029	3382085	3401029	-	transcript1370.chr16.nic@ZSCAN32	transcript1370.chr16.nic	protein_coding	3400945,3397192,3393649,3390423,3390010,3382085	3401029,3397744,3393814,3390517,3390133,3384941	Gene ID= ENSG00000140987.19 TPM= 2.57 Transcript Type= NA
chr16	3382081	3401065	3382081	3401065	-	ENST00000618425.4@ZSCAN32	ENST00000618425.4	protein_coding	3400945,3397192,3384459,3382081	3401065,3397744,3384941,3383711	Gene ID= ENSG00000140987.19 TPM= 1.4 Transcript Type= protein_coding
chr16	3382085	3401029	3382085	3401029	-	transcript1376.chr16.nic@ZSCAN32	transcript1376.chr16.nic	protein_coding	3400945,3397192,3393649,3382085	3401029,3397744,3393814,3384941	Gene ID= ENSG00000140987.19 TPM= 2.57 Transcript Type= NA
chr16	3401244	3405079	3401244	3405079	+	ENST00000344823.9@ZNF174	ENST00000344823.9	protein_coding	3401244,3404426,3404909	3402406,3404648,3405079	Gene ID= ENSG00000103343.12 TPM= 4.67 Transcript Type= protein_coding
chr16	3432422	3443542	3432422	3443542	-	ENST00000301744.5@ZNF597	ENST00000301744.5	protein_coding	3443360,3443121,3440807,3432422	3443542,3443206,3440933,3437538	Gene ID= ENSG00000167981.5 TPM= 1.17 Transcript Type= protein_coding
chr16	3443611	3486963	3443611	3486963	+	ENST00000407558.8@NAA60	ENST00000407558.8	protein_coding	3443611,3448471,3476222,3479471,3482502,3483363,3484699,3485467	3443837,3448540,3476337,3479600,3482598,3483597,3485061,3486963	Gene ID= ENSG00000122390.17 TPM= 20.9 Transcript Type= protein_coding
chr16	3458016	3486953	3458016	3486953	+	transcript1407.chr16.nic@NAA60	transcript1407.chr16.nic	protein_coding	3458016,3476222,3479471,3482502,3483363,3484699	3458181,3476337,3479600,3482598,3483597,3486953	Gene ID= ENSG00000122390.17 TPM= 17.98 Transcript Type= NA
chr16	3457993	3486952	3457993	3486952	+	ENST00000360862.9@NAA60	ENST00000360862.9	protein_coding	3457993,3479471,3482502,3483363,3484699,3485467	3458181,3479600,3482598,3483597,3485083,3486952	Gene ID= ENSG00000122390.17 TPM= 7.47 Transcript Type= protein_coding
chr16	3458012	3486952	3458012	3486952	+	ENST00000414063.6@NAA60	ENST00000414063.6	protein_coding	3458012,3476222,3479471,3482502,3483363,3484699,3485467	3458181,3476337,3479600,3482598,3483597,3485083,3486952	Gene ID= ENSG00000122390.17 TPM= 31.99 Transcript Type= protein_coding
chr16	3458078	3486952	3458078	3486952	+	ENST00000575076.5@NAA60	ENST00000575076.5	protein_coding	3458078,3476222,3479471,3482502,3483363,3484699,3485467	3458181,3476337,3479600,3482598,3483597,3485061,3486952	Gene ID= ENSG00000122390.17 TPM= 11.56 Transcript Type= protein_coding
chr16	3500924	3539048	3500924	3539048	+	ENST00000576634.5@CLUAP1	ENST00000576634.5	protein_coding	3500924,3504720,3506331,3508289,3512383,3515508,3519903,3523158,3526412,3530568,3532786,3536122	3501089,3504831,3506415,3508468,3512478,3515591,3520036,3523299,3526484,3530675,3532841,3539048	Gene ID= ENSG00000103351.12 TPM= 4.67 Transcript Type= protein_coding
chr16	3539033	3577391	3539033	3577391	-	ENST00000359128.9@NLRC3	ENST00000359128.9	protein_coding	3577149,3567243,3565319,3564859,3563009,3561702,3557593,3556911,3554242,3552196,3550414,3549697,3549142,3548670,3548135,3544246,3543425,3542692,3542191,3539033	3577391,3567324,3565380,3565060,3564758,3561788,3557676,3556994,3554325,3552279,3550497,3549780,3549225,3548753,3548218,3544329,3543508,3542775,3542274,3541915	Gene ID= ENSG00000167984.17 TPM= 2.34 Transcript Type= protein_coding
chr16	3658037	3717597	3658037	3717597	-	ENST00000246957.9@TRAP1	ENST00000246957.9	protein_coding	3717421,3690827,3689055,3685996,3679719,3677498,3676036,3675324,3674339,3672700,3671722,3665971,3664274,3663424,3662882,3661987,3658793,3658037	3717597,3690985,3689137,3686136,3679790,3677658,3676145,3675397,3674494,3672820,3671791,3666118,3664459,3663562,3662967,3662132,3658865,3658230	Gene ID= ENSG00000126602.10 TPM= 123.76 Transcript Type= protein_coding
chr16	3790367	3880758	3790367	3880758	-	transcript1438.chr16.nic@CREBBP	transcript1438.chr16.nic	protein_coding	3879832,3850297,3810603,3790367	3880758,3851009,3810779,3793626	Gene ID= ENSG00000005339.14 TPM= 4.67 Transcript Type= NA
chr16	3849526	3880758	3849526	3880758	-	transcript1439.chr16.nic@CREBBP	transcript1439.chr16.nic	protein_coding	3879832,3849526	3880758,3851009	Gene ID= ENSG00000005339.14 TPM= 5.84 Transcript Type= NA
chr16	3725054	3880726	3725054	3880726	-	ENST00000262367.9@CREBBP	ENST00000262367.9	protein_coding	3879832,3850297,3810603,3793386,3791981,3782684,3781204,3780732,3778700,3778011,3777613,3774569,3773751,3770570,3769174,3767720,3758854,3757809,3757288,3751726,3749627,3745277,3744894,3740399,3739578,3738559,3736650,3736036,3731776,3731192,3725054	3880726,3851009,3810779,3793626,3792094,3782926,3781306,3780878,3778817,3778182,3777657,3774693,3773930,3770986,3769353,3767909,3758972,3758048,3757376,3751806,3749683,3745354,3744961,3740549,3739724,3738672,3736815,3736203,3731937,3731473,3729874	Gene ID= ENSG00000005339.14 TPM= 162.3 Transcript Type= protein_coding
chr16	3953387	4116542	3953387	4116542	-	transcript1446.chr16.nic@ADCY9	transcript1446.chr16.nic	protein_coding	4115690,4113750,4007368,3993406,3992146,3988994,3983232,3979116,3977482,3974669,3953387	4116542,4115485,4007558,3993510,3992363,3989096,3983440,3979275,3977630,3974710,3953516	Gene ID= ENSG00000162104.9 TPM= 10.51 Transcript Type= NA
chr16	4110377	4116542	4110377	4116542	-	transcript1456.chr16.nic@ADCY9	transcript1456.chr16.nic	protein_coding	4115690,4110377	4116542,4115485	Gene ID= ENSG00000162104.9 TPM= 7.01 Transcript Type= NA
chr16	3962651	4116185	3962651	4116185	-	ENST00000294016.7@ADCY9	ENST00000294016.7	protein_coding	4115690,4113750,4007368,3993406,3992146,3988994,3983232,3979116,3977482,3974669,3962651	4116185,4115485,4007558,3993510,3992363,3989096,3983440,3979275,3977630,3974710,3966966	Gene ID= ENSG00000162104.9 TPM= 40.87 Transcript Type= protein_coding
chr16	4257186	4273075	4257186	4273075	-	ENST00000204517.10@TFAP4	ENST00000204517.10	protein_coding	4272658,4262536,4262324,4261779,4260455,4260090,4257186	4273075,4262701,4262422,4261949,4260595,4260245,4258249	Gene ID= ENSG00000090447.11 TPM= 4.67 Transcript Type= protein_coding
chr16	4316067	4339593	4316067	4339593	+	transcript1462.chr16.nnic@GLIS2	transcript1462.chr16.nnic	protein_coding	4316067,4332215,4333342,4334796,4335058,4335273,4336723	4316254,4332447,4333515,4334977,4335193,4335393,4339593	Gene ID= ENSG00000126603.8 TPM= 49.04 Transcript Type= NA
chr16	4334239	4339593	4334239	4339593	+	transcript1467.chr16.nnic@GLIS2	transcript1467.chr16.nnic	protein_coding	4334239,4335273,4336723	4335193,4335393,4339593	Gene ID= ENSG00000126603.8 TPM= 46.7 Transcript Type= NA
chr16	4340248	4351372	4340248	4351372	-	ENST00000318059.7@PAM16	ENST00000318059.7	protein_coding	4351232,4343207,4341368,4340920,4340248	4351372,4343291,4341504,4340985,4340405	Gene ID= ENSG00000217930.7 TPM= 12.06 Transcript Type= protein_coding
chr16	4340251	4351270	4340251	4351270	-	ENST00000573614.5@PAM16	ENST00000573614.5	protein_coding	4351232,4343207,4341368,4340920,4340251	4351270,4343291,4341672,4340985,4340405	Gene ID= ENSG00000217930.7 TPM= 1.55 Transcript Type= processed_transcript
chr16	4340251	4351315	4340251	4351315	-	ENST00000571986.5@PAM16	ENST00000571986.5	protein_coding	4351232,4343207,4341368,4340920,4340251	4351315,4343291,4341583,4340985,4340405	Gene ID= ENSG00000217930.7 TPM= 1.55 Transcript Type= nonsense_mediated_decay
chr16	4340251	4416587	4340251	4416587	-	ENST00000572467.5@CORO7-PAM16	ENST00000572467.5	protein_coding	4416459,4413308,4412356,4408181,4407501,4405491,4395289,4388545,4387986,4365491,4365003,4364775,4364597,4364276,4362612,4361985,4361361,4361162,4360943,4360444,4360278,4359480,4359296,4358367,4357968,4357168,4355286,4343207,4341368,4340920,4340251	4416587,4413404,4412430,4408251,4407684,4405567,4395339,4388631,4388068,4365545,4365060,4364920,4364689,4364413,4362738,4362160,4361469,4361248,4361085,4360548,4360363,4359621,4359385,4358483,4358103,4357259,4355372,4343291,4341504,4340985,4340405	Gene ID= ENSG00000103426.12 TPM= 3.5 Transcript Type= protein_coding
chr16	4352817	4356922	4352817	4356922	-	transcript1502.chr16.nnic@NA	transcript1502.chr16.nnic	NA	4352817	4356922	Gene ID= novel_gene_chr16_1503 TPM= 2.34 Transcript Type= NA
chr16	4354544	4416596	4354544	4416596	-	transcript1482.chr16.nic@CORO7	transcript1482.chr16.nic	protein_coding	4416459,4413308,4412356,4408181,4407501,4405491,4395289,4388545,4387986,4365491,4365003,4364775,4364597,4364276,4362612,4361361,4361162,4360943,4360444,4360278,4359480,4359296,4358367,4357968,4357168,4355286,4354544	4416596,4413404,4412430,4408251,4407684,4405567,4395339,4388631,4388068,4365545,4365060,4364920,4364689,4364413,4362738,4362160,4361248,4361085,4360548,4360363,4359621,4359385,4358483,4358103,4357259,4355372,4355163	Gene ID= ENSG00000262246.5 TPM= 6.04 Transcript Type= NA
chr16	4354544	4416596	4354544	4416596	-	transcript1485.chr16.nic@CORO7	transcript1485.chr16.nic	protein_coding	4416459,4413308,4412356,4408181,4407501,4405491,4395289,4388545,4387986,4365491,4365003,4364775,4364597,4364276,4362612,4361361,4361162,4360943,4360444,4360278,4359296,4358367,4357968,4357168,4355286,4354544	4416596,4413404,4412430,4408251,4407684,4405567,4395339,4388631,4388068,4365545,4365060,4364920,4364689,4364413,4362738,4362160,4361248,4361085,4360548,4360363,4359621,4358483,4358103,4357259,4355372,4355163	Gene ID= ENSG00000262246.5 TPM= 3.7 Transcript Type= NA
chr16	4354542	4416664	4354542	4416664	-	ENST00000251166.8@CORO7	ENST00000251166.8	protein_coding	4416459,4413308,4412356,4408181,4407501,4405491,4395289,4388545,4387986,4365491,4365003,4364775,4364597,4364276,4362612,4361985,4361361,4361162,4360943,4360444,4360278,4359480,4359296,4358367,4357968,4357168,4355286,4354542	4416664,4413404,4412430,4408251,4407684,4405567,4395339,4388631,4388068,4365545,4365060,4364920,4364689,4364413,4362738,4362160,4361469,4361248,4361085,4360548,4360363,4359621,4359385,4358483,4358103,4357259,4355372,4355163	Gene ID= ENSG00000262246.5 TPM= 57.99 Transcript Type= protein_coding
chr16	4371848	4383528	4371848	4383528	+	ENST00000304735.3@VASN	ENST00000304735.3	protein_coding	4371848,4380869	4371993,4383528	Gene ID= ENSG00000168140.4 TPM= 137.78 Transcript Type= protein_coding
chr16	4383372	4387149	4383372	4387149	-	transcript1504.chr16.nnic@NA	transcript1504.chr16.nnic	NA	4383372	4387149	Gene ID= novel_gene_chr16_1505 TPM= 2.34 Transcript Type= NA
chr16	4425805	4456775	4425805	4456775	+	ENST00000262375.10@DNAJA3	ENST00000262375.10	protein_coding	4425805,4434384,4437402,4441375,4442268,4443017,4444664,4446886,4448733,4450400,4454811,4455546	4426092,4434517,4437485,4441575,4442420,4443164,4444728,4447014,4448848,4450497,4454927,4456775	Gene ID= ENSG00000103423.13 TPM= 23.94 Transcript Type= protein_coding
chr16	4425860	4456775	4425860	4456775	+	ENST00000355296.8@DNAJA3	ENST00000355296.8	protein_coding	4425860,4434384,4437402,4441375,4442268,4443017,4444664,4446886,4448733,4450400,4455546	4426092,4434517,4437485,4441575,4442420,4443164,4444728,4447014,4448848,4450497,4456775	Gene ID= ENSG00000103423.13 TPM= 67.14 Transcript Type= protein_coding
chr16	4461695	4474643	4461695	4474643	-	ENST00000574425.5@NMRAL1	ENST00000574425.5	protein_coding	4474423,4474093,4469227,4466153,4463660,4461695	4474643,4474166,4469465,4466402,4463850,4461959	Gene ID= ENSG00000153406.13 TPM= 6.36 Transcript Type= protein_coding
chr16	4461680	4474895	4461680	4474895	-	ENST00000283429.10@NMRAL1	ENST00000283429.10	protein_coding	4474554,4474093,4469227,4466153,4463660,4461680	4474895,4474166,4469465,4466402,4463850,4461959	Gene ID= ENSG00000153406.13 TPM= 12.59 Transcript Type= protein_coding
chr16	4461694	4474672	4461694	4474672	-	transcript1531.chr16.nic@NMRAL1	transcript1531.chr16.nic	protein_coding	4474554,4474093,4469504,4466153,4463660,4461694	4474672,4474166,4469698,4466402,4463850,4461959	Gene ID= ENSG00000153406.13 TPM= 2.57 Transcript Type= NA
chr16	4461694	4474622	4461694	4474622	-	ENST00000404295.7@NMRAL1	ENST00000404295.7	protein_coding	4474410,4474093,4469227,4466153,4463660,4461694	4474622,4474166,4469465,4466402,4463850,4461959	Gene ID= ENSG00000153406.13 TPM= 18.42 Transcript Type= protein_coding
chr16	4461691	4476306	4461691	4476306	-	ENST00000574733.5@NMRAL1	ENST00000574733.5	protein_coding	4476237,4474093,4469227,4466153,4463660,4461691	4476306,4474792,4469465,4466402,4463850,4461959	Gene ID= ENSG00000153406.13 TPM= 7.92 Transcript Type= protein_coding
chr16	4476340	4510295	4476340	4510295	+	ENST00000458134.7@HMOX2	ENST00000458134.7	protein_coding	4476340,4483637,4505484,4506895,4507713,4509412,4509629	4476487,4483754,4505610,4507012,4508204,4509538,4510295	Gene ID= ENSG00000103415.11 TPM= 3.5 Transcript Type= protein_coding
chr16	4476361	4509901	4476361	4509901	+	transcript1540.chr16.nnic@HMOX2	transcript1540.chr16.nnic	protein_coding	4476361,4496146,4505484,4506895,4507713,4509412,4509629	4476487,4499394,4505610,4507012,4508204,4509538,4509901	Gene ID= ENSG00000103415.11 TPM= 3.5 Transcript Type= NA
chr16	4475924	4510347	4475924	4510347	+	ENST00000570646.5@HMOX2	ENST00000570646.5	protein_coding	4475924,4505484,4506895,4507713,4509412,4509629	4476487,4505610,4507012,4508204,4509538,4510347	Gene ID= ENSG00000103415.11 TPM= 99.25 Transcript Type= protein_coding
chr16	4476340	4510346	4476340	4510346	+	ENST00000619913.4@HMOX2	ENST00000619913.4	protein_coding	4476340,4505484,4506895,4507713,4509412,4509629	4476665,4505610,4507012,4508204,4509538,4510346	Gene ID= ENSG00000103415.11 TPM= 1.17 Transcript Type= protein_coding
chr16	4510675	4538470	4510675	4538470	-	ENST00000563332.6@CDIP1	ENST00000563332.6	protein_coding	4538325,4514575,4514046,4513696,4512791,4510675	4538470,4514664,4514144,4513851,4513064,4512683	Gene ID= ENSG00000089486.16 TPM= 18.1 Transcript Type= protein_coding
chr16	4511324	4538784	4511324	4538784	-	ENST00000567695.5@CDIP1	ENST00000567695.5	protein_coding	4538702,4514575,4514046,4513696,4512791,4511324	4538784,4514664,4514144,4513851,4513064,4512683	Gene ID= ENSG00000089486.16 TPM= 23.94 Transcript Type= protein_coding
chr16	4608883	4614926	4608883	4614926	-	ENST00000283474.11@UBALD1	ENST00000283474.11	protein_coding	4614678,4610493,4608883	4614926,4610555,4609983	Gene ID= ENSG00000153443.12 TPM= 28.02 Transcript Type= protein_coding
chr16	4608883	4612280	4608883	4612280	-	transcript1559.chr16.nic@UBALD1	transcript1559.chr16.nic	protein_coding	4610493,4608883	4612280,4609983	Gene ID= ENSG00000153443.12 TPM= 2.34 Transcript Type= NA
chr16	4624790	4690974	4624790	4690974	+	ENST00000262370.11@MGRN1	ENST00000262370.11	protein_coding	4624790,4650365,4651963,4652678,4657246,4664709,4665102,4668265,4671391,4673498,4677463,4680032,4681550,4682823,4683224,4683843,4688796	4625048,4650483,4652051,4652824,4657363,4664775,4665151,4668312,4671459,4673657,4677572,4680097,4681776,4682946,4683269,4683932,4690974	Gene ID= ENSG00000102858.12 TPM= 21.02 Transcript Type= protein_coding
chr16	4658511	4662339	4658511	4662339	-	transcript1572.chr16.nnic@NA	transcript1572.chr16.nnic	NA	4658511	4662339	Gene ID= novel_gene_chr16_1573 TPM= 8.17 Transcript Type= NA
chr16	4677838	4680132	4677838	4680132	-	transcript1574.chr16.nnic@NA	transcript1574.chr16.nnic	NA	4677838	4680132	Gene ID= novel_gene_chr16_1575 TPM= 8.17 Transcript Type= NA
chr16	4693694	4695859	4693694	4695859	+	ENST00000304301.10@NUDT16L1	ENST00000304301.10	protein_coding	4693694,4693978,4694958	4693879,4694238,4695859	Gene ID= ENSG00000168101.14 TPM= 61.88 Transcript Type= protein_coding
chr16	4693707	4695859	4693707	4695859	+	ENST00000586536.1@NUDT16L1	ENST00000586536.1	protein_coding	4693707,4693978,4694958	4693879,4694308,4695859	Gene ID= ENSG00000168101.14 TPM= 10.51 Transcript Type= protein_coding
chr16	4693718	4695855	4693718	4695855	+	ENST00000405142.1@NUDT16L1	ENST00000405142.1	protein_coding	4693718,4693978	4693879,4695855	Gene ID= ENSG00000168101.14 TPM= 1.17 Transcript Type= protein_coding
chr16	4696510	4734355	4696510	4734355	-	transcript1584.chr16.nic@ANKS3	transcript1584.chr16.nic	protein_coding	4734156,4729980,4726979,4726659,4724750,4714051,4705095,4702102,4701434,4700970,4699052,4698800,4698427,4697977,4697333,4697017,4696510	4734355,4730151,4727177,4726780,4724831,4714186,4705253,4702242,4701543,4701134,4699176,4698941,4698599,4698062,4697416,4697104,4696896	Gene ID= ENSG00000168096.14 TPM= 7.71 Transcript Type= NA
chr16	4696510	4734253	4696510	4734253	-	transcript1585.chr16.nic@ANKS3	transcript1585.chr16.nic	protein_coding	4734156,4729980,4726979,4726659,4724750,4714051,4705095,4702102,4701434,4700970,4699052,4698800,4698427,4697977,4697333,4697017,4696510	4734253,4730151,4727177,4726854,4724831,4714186,4705253,4702242,4701543,4701134,4699176,4698941,4698599,4698062,4697416,4697104,4696896	Gene ID= ENSG00000168096.14 TPM= 6.54 Transcript Type= NA
chr16	4696510	4734251	4696510	4734251	-	transcript1588.chr16.nic@ANKS3	transcript1588.chr16.nic	protein_coding	4734156,4729980,4726659,4724750,4714051,4705095,4702102,4701434,4700970,4699052,4698800,4698427,4697977,4697333,4697017,4696510	4734251,4730151,4726780,4724831,4714186,4705253,4702242,4701543,4701134,4699176,4698941,4698599,4698062,4697416,4697104,4696896	Gene ID= ENSG00000168096.14 TPM= 7.71 Transcript Type= NA
chr16	4696510	4734377	4696510	4734377	-	ENST00000450067.6@ANKS3	ENST00000450067.6	protein_coding	4734156,4729980,4724750,4714051,4705095,4702102,4701434,4700970,4699052,4698800,4698427,4697977,4697333,4697017,4696510	4734377,4730151,4724831,4714186,4705253,4702242,4701543,4701134,4699176,4698941,4698599,4698062,4697416,4697104,4696896	Gene ID= ENSG00000168096.14 TPM= 3.04 Transcript Type= protein_coding
chr16	4696512	4734199	4696512	4734199	-	ENST00000590193.5@ANKS3	ENST00000590193.5	protein_coding	4734156,4729980,4726979,4724750,4714051,4705095,4702102,4701434,4700970,4699052,4698800,4698427,4697977,4697333,4697017,4696512	4734199,4730151,4727177,4724831,4714186,4705253,4702242,4701543,4701134,4699176,4698941,4698599,4698062,4697416,4697104,4696896	Gene ID= ENSG00000168096.14 TPM= 3.04 Transcript Type= nonsense_mediated_decay
chr16	4734510	4743839	4734510	4743839	+	transcript1602.chr16.nic@C16orf71	transcript1602.chr16.nic	protein_coding	4734510,4736464,4737800,4740153,4743043	4734698,4736643,4737946,4740659,4743839	Gene ID= ENSG00000166246.13 TPM= 2.34 Transcript Type= NA
chr16	4748239	4767218	4748239	4767218	-	ENST00000219478.10@ZNF500	ENST00000219478.10	protein_coding	4767017,4765565,4762573,4762271,4760492,4748239	4767218,4766076,4762756,4762335,4760588,4753058	Gene ID= ENSG00000103199.13 TPM= 1.17 Transcript Type= protein_coding
chr16	4750792	4753188	4750792	4753188	-	ENST00000591026.1@ZNF500	ENST00000591026.1	protein_coding	4750792	4753188	Gene ID= ENSG00000103199.13 TPM= 2.34 Transcript Type= processed_transcript
chr16	4795378	4796281	4795378	4796281	+	ENST00000588606.5@SMIM22	ENST00000588606.5	protein_coding	4795378,4795715,4795948,4796190	4795449,4795858,4796033,4796281	Gene ID= ENSG00000267795.5 TPM= 4.67 Transcript Type= protein_coding
chr16	4795421	4796281	4795421	4796281	+	ENST00000586005.5@SMIM22	ENST00000586005.5	protein_coding	4795421,4795715,4795948,4796190	4795449,4795858,4796048,4796281	Gene ID= ENSG00000267795.5 TPM= 2.34 Transcript Type= protein_coding
chr16	4796968	4802950	4796968	4802950	-	ENST00000322048.11@ROGDI	ENST00000322048.11	protein_coding	4802527,4802382,4801503,4801267,4800498,4799686,4798569,4798071,4797938,4797714,4796968	4802950,4802453,4801585,4801321,4800578,4799781,4798667,4798184,4797987,4797840,4797501	Gene ID= ENSG00000067836.12 TPM= 45.15 Transcript Type= protein_coding
chr16	4796968	4802926	4796968	4802926	-	transcript1642.chr16.nnic@ROGDI	transcript1642.chr16.nnic	protein_coding	4802527,4802382,4801503,4801267,4800498,4799686,4798569,4798071,4797938,4797714,4796968	4802926,4802453,4801585,4801321,4800578,4799781,4798667,4798184,4797987,4797861,4797501	Gene ID= ENSG00000067836.12 TPM= 7.79 Transcript Type= NA
chr16	4796968	4802872	4796968	4802872	-	transcript1643.chr16.nic@ROGDI	transcript1643.chr16.nic	protein_coding	4802382,4801503,4801267,4800498,4799686,4798569,4798071,4797938,4797714,4796968	4802872,4801585,4801321,4800578,4799781,4798667,4798184,4797987,4797840,4797501	Gene ID= ENSG00000067836.12 TPM= 6.62 Transcript Type= NA
chr16	4803203	4847284	4803203	4847284	-	transcript1619.chr16.nic@GLYR1	transcript1619.chr16.nic	protein_coding	4847228,4846174,4845074,4832774,4831979,4823821,4822875,4821547,4821380,4817598,4814537,4813737,4812086,4811623,4811170,4804522,4803203	4847284,4846210,4845153,4832912,4832221,4823907,4822931,4821597,4821453,4817697,4814629,4813838,4812248,4811802,4811294,4805310,4804148	Gene ID= ENSG00000140632.16 TPM= 6.7 Transcript Type= NA
chr16	4803203	4847283	4803203	4847283	-	transcript1622.chr16.nic@GLYR1	transcript1622.chr16.nic	protein_coding	4847228,4846174,4845074,4832774,4823821,4822875,4821547,4821380,4817598,4814537,4813737,4812086,4811623,4811170,4804522,4803203	4847283,4846210,4845153,4832912,4823907,4822931,4821597,4821453,4817697,4814629,4813838,4812248,4811802,4811294,4805310,4804148	Gene ID= ENSG00000140632.16 TPM= 4.37 Transcript Type= NA
chr16	4803203	4847286	4803203	4847286	-	transcript1624.chr16.nic@GLYR1	transcript1624.chr16.nic	protein_coding	4847228,4846174,4845074,4832774,4831979,4823821,4822875,4821547,4821380,4817598,4813737,4812086,4811623,4811170,4804522,4803203	4847286,4846210,4845153,4832912,4832221,4823907,4822931,4821597,4821453,4817697,4814647,4812248,4811802,4811294,4805310,4804148	Gene ID= ENSG00000140632.16 TPM= 4.07 Transcript Type= NA
chr16	4803203	4847288	4803203	4847288	-	transcript1632.chr16.nic@GLYR1	transcript1632.chr16.nic	protein_coding	4847228,4846174,4845074,4832774,4823821,4822875,4821547,4821380,4817598,4814537,4813737,4812086,4811623,4811170,4803203	4847288,4846210,4845153,4832912,4823907,4822931,4821597,4821453,4817697,4814629,4813838,4812248,4811802,4811294,4805310	Gene ID= ENSG00000140632.16 TPM= 20.77 Transcript Type= NA
chr16	4803203	4847279	4803203	4847279	-	ENST00000436648.9@GLYR1	ENST00000436648.9	protein_coding	4847228,4846174,4845074,4832774,4823821,4822875,4821547,4821380,4817598,4814537,4813737,4812086,4811623,4811170,4803203	4847279,4846210,4845153,4832912,4823907,4822931,4821597,4821453,4817697,4814647,4813838,4812248,4811802,4811294,4805310	Gene ID= ENSG00000140632.16 TPM= 28.94 Transcript Type= protein_coding
chr16	4818760	4823757	4818760	4823757	+	transcript1666.chr16.nnic@NA	transcript1666.chr16.nnic	NA	4818760	4823757	Gene ID= novel_gene_chr16_1667 TPM= 7.01 Transcript Type= NA
chr16	4847440	4882360	4847440	4882360	+	transcript1614.chr16.nnic@UBN1	transcript1614.chr16.nnic	protein_coding	4847440,4852879,4857990,4858568,4859025,4859865,4860664,4868833,4870212,4870516,4870844,4871155,4872884,4873031,4874211,4876871,4877385,4880083	4848210,4853139,4858076,4858663,4859159,4859968,4861102,4868903,4870341,4870634,4870972,4871301,4872934,4873073,4875434,4877111,4877474,4882360	Gene ID= ENSG00000118900.14 TPM= 13.86 Transcript Type= NA
chr16	4847443	4882360	4847443	4882360	+	transcript1616.chr16.nnic@UBN1	transcript1616.chr16.nnic	protein_coding	4847443,4852958,4857990,4858568,4859025,4859865,4860664,4868833,4870212,4870516,4870844,4871155,4872884,4873031,4874211,4876871,4877385,4880083	4848210,4853166,4858076,4858663,4859159,4859968,4861102,4868903,4870341,4870634,4870972,4871301,4872934,4873073,4875434,4877111,4877474,4882360	Gene ID= ENSG00000118900.14 TPM= 12.17 Transcript Type= NA
chr16	4847440	4882360	4847440	4882360	+	transcript1617.chr16.nic@UBN1	transcript1617.chr16.nic	protein_coding	4847440,4852879,4857990,4858568,4859025,4859865,4860664,4868833,4870212,4870516,4870844,4872884,4873031,4874211,4876871,4877385,4880083	4848210,4853166,4858076,4858663,4859159,4859968,4861102,4868903,4870341,4870634,4870972,4872934,4873073,4875434,4877111,4877474,4882360	Gene ID= ENSG00000118900.14 TPM= 13.08 Transcript Type= NA
chr16	4847440	4862341	4847440	4862341	+	transcript1653.chr16.nic@UBN1	transcript1653.chr16.nic	protein_coding	4847440,4852879,4857990,4858568,4859025,4859865,4860664	4848210,4853166,4858076,4858663,4859159,4859968,4862341	Gene ID= ENSG00000118900.14 TPM= 5.2 Transcript Type= NA
chr16	4847631	4882360	4847631	4882360	+	ENST00000262376.10@UBN1	ENST00000262376.10	protein_coding	4847631,4852879,4857990,4858568,4859025,4859865,4860664,4868833,4870212,4870516,4870844,4871155,4872884,4873031,4874211,4876871,4877385,4880083	4848210,4853166,4858076,4858663,4859159,4859968,4861102,4868903,4870341,4870634,4870972,4871301,4872934,4873073,4875434,4877111,4877474,4882360	Gene ID= ENSG00000118900.14 TPM= 24.08 Transcript Type= protein_coding
chr16	4847502	4849127	4847502	4849127	+	transcript1668.chr16.nnic@NA	transcript1668.chr16.nnic	NA	4847502	4849127	Gene ID= novel_gene_chr16_1669 TPM= 4.67 Transcript Type= NA
chr16	4882507	4937142	4882507	4937142	-	transcript1608.chr16.nnic@PPL	transcript1608.chr16.nnic	protein_coding	4936984,4903886,4902406,4900964,4900830,4899223,4899013,4897675,4895594,4895261,4894467,4893541,4893213,4892035,4891811,4890728,4890184,4888978,4888102,4887135,4882507	4937142,4904040,4902526,4901089,4900871,4899384,4899120,4897770,4895716,4895407,4894618,4893638,4893370,4892213,4891949,4890921,4890334,4889061,4888218,4887227,4886047	Gene ID= ENSG00000118898.15 TPM= 5.84 Transcript Type= NA
chr16	4891443	4937143	4891443	4937143	-	transcript1631.chr16.nic@PPL	transcript1631.chr16.nic	protein_coding	4936984,4910850,4903886,4902406,4900964,4900830,4899223,4899013,4897675,4895594,4895261,4894467,4893541,4893213,4892035,4891443	4937143,4910949,4904040,4902526,4901089,4900871,4899384,4899120,4897770,4895716,4895407,4894618,4893638,4893370,4892213,4891949	Gene ID= ENSG00000118898.15 TPM= 7.01 Transcript Type= NA
chr16	4882507	4937135	4882507	4937135	-	ENST00000345988.6@PPL	ENST00000345988.6	protein_coding	4936984,4910850,4903886,4902406,4900964,4900830,4899223,4899013,4897675,4895594,4895261,4894467,4893541,4893213,4892035,4891811,4890728,4890184,4888978,4888102,4887135,4882507	4937135,4910949,4904040,4902526,4901089,4900871,4899384,4899120,4897770,4895716,4895407,4894618,4893638,4893370,4892213,4891949,4890921,4890334,4889061,4888218,4887227,4886047	Gene ID= ENSG00000118898.15 TPM= 168.13 Transcript Type= protein_coding
chr16	5033702	5043999	5033702	5043999	+	ENST00000632058.1@NAGPA-AS1	ENST00000632058.1	lincRNA	5033702,5042095	5034061,5043999	Gene ID= ENSG00000267072.2 TPM= 1.17 Transcript Type= lincRNA
chr16	5024871	5033953	5024871	5033953	-	transcript1675.chr16.nnic@NAGPA	transcript1675.chr16.nnic	protein_coding	5033829,5033273,5031745,5030385,5028880,5027980,5027846,5027278,5027135,5024871	5033953,5033728,5031884,5030493,5029008,5028185,5027893,5027379,5027198,5025601	Gene ID= ENSG00000103174.11 TPM= 2.63 Transcript Type= NA
chr16	5024872	5033935	5024872	5033935	-	transcript1680.chr16.nic@NAGPA	transcript1680.chr16.nic	protein_coding	5033273,5031745,5030385,5028880,5027980,5027846,5027278,5027135,5024872	5033935,5031884,5030493,5029008,5028185,5027893,5027379,5027198,5025685	Gene ID= ENSG00000103174.11 TPM= 8.47 Transcript Type= NA
chr16	5024872	5033953	5024872	5033953	-	transcript1682.chr16.nic@NAGPA	transcript1682.chr16.nic	protein_coding	5033829,5033273,5031745,5030385,5028880,5027980,5027846,5027135,5024872	5033953,5033728,5031884,5030493,5029008,5028185,5027893,5027379,5025685	Gene ID= ENSG00000103174.11 TPM= 2.63 Transcript Type= NA
chr16	5024844	5033934	5024844	5033934	-	ENST00000312251.7@NAGPA	ENST00000312251.7	protein_coding	5033829,5033273,5031745,5030385,5028880,5027980,5027846,5027278,5027135,5024844	5033934,5033728,5031884,5030493,5029008,5028185,5027893,5027379,5027198,5025685	Gene ID= ENSG00000103174.11 TPM= 30.65 Transcript Type= protein_coding
chr16	5044122	5066028	5044122	5066028	-	transcript1683.chr16.nnic@C16orf89	transcript1683.chr16.nnic	protein_coding	5065701,5062425,5060286,5058493,5056053,5055246,5054617,5047878,5044122	5066028,5062574,5060436,5058610,5056188,5055350,5054711,5047964,5044478	Gene ID= ENSG00000153446.15 TPM= 22.01 Transcript Type= NA
chr16	5044122	5066110	5044122	5066110	-	ENST00000315997.5@C16orf89	ENST00000315997.5	protein_coding	5065701,5062425,5060286,5058493,5056053,5055246,5047878,5044122	5066110,5062574,5060436,5058610,5056188,5055350,5047964,5044836	Gene ID= ENSG00000153446.15 TPM= 22.88 Transcript Type= protein_coding
chr16	5044122	5066040	5044122	5066040	-	ENST00000472572.7@C16orf89	ENST00000472572.7	protein_coding	5065701,5062425,5060286,5058493,5056053,5055246,5047878,5044122	5066040,5062574,5060436,5058610,5056188,5055350,5047964,5044478	Gene ID= ENSG00000153446.15 TPM= 256.7 Transcript Type= protein_coding
chr16	5060224	5065919	5060224	5065919	-	ENST00000591875.1@C16orf89	ENST00000591875.1	protein_coding	5065701,5062425,5060224	5065919,5062574,5060436	Gene ID= ENSG00000153446.15 TPM= 1.17 Transcript Type= retained_intron
chr16	5071819	5085587	5071819	5085587	+	ENST00000262374.9@ALG1	ENST00000262374.9	protein_coding	5071819,5072951,5073153,5075388,5077445,5077907,5078757,5079064,5079748,5080946,5082559,5083682,5084750	5072057,5073028,5073256,5075536,5077534,5078017,5078878,5079102,5079807,5081056,5082673,5083757,5085587	Gene ID= ENSG00000033011.11 TPM= 22.18 Transcript Type= protein_coding
chr16	5084304	5097753	5084304	5097753	-	transcript1711.chr16.nic@EEF2KMT	transcript1711.chr16.nic	protein_coding	5097644,5097280,5095452,5093484,5091794,5090432,5090084,5089107,5084304	5097753,5097353,5095514,5093564,5091895,5090565,5090349,5089256,5085732	Gene ID= ENSG00000118894.14 TPM= 2.57 Transcript Type= NA
chr16	5084304	5097754	5084304	5097754	-	transcript1712.chr16.nic@EEF2KMT	transcript1712.chr16.nic	protein_coding	5097280,5095452,5093484,5091794,5090432,5090084,5089107,5084304	5097754,5095514,5093564,5091895,5090565,5090349,5089256,5085732	Gene ID= ENSG00000118894.14 TPM= 4.9 Transcript Type= NA
chr16	5084304	5097808	5084304	5097808	-	ENST00000427587.8@EEF2KMT	ENST00000427587.8	protein_coding	5097644,5095452,5093484,5091794,5090432,5090084,5089107,5084304	5097808,5095514,5093564,5091895,5090565,5090349,5089256,5085732	Gene ID= ENSG00000118894.14 TPM= 16.58 Transcript Type= protein_coding
chr16	5084304	5097764	5084304	5097764	-	transcript1719.chr16.nic@EEF2KMT	transcript1719.chr16.nic	protein_coding	5097644,5095452,5091794,5090432,5090084,5089107,5084304	5097764,5095514,5091895,5090565,5090349,5089256,5085732	Gene ID= ENSG00000118894.14 TPM= 2.57 Transcript Type= NA
chr16	5084304	5097788	5084304	5097788	-	ENST00000458008.8@EEF2KMT	ENST00000458008.8	protein_coding	5097644,5095452,5093484,5090432,5090084,5089107,5084304	5097788,5095514,5093564,5090565,5090349,5089256,5085732	Gene ID= ENSG00000118894.14 TPM= 2.57 Transcript Type= protein_coding
chr16	8621691	8646224	8621691	8646224	+	ENST00000163678.11@METTL22	ENST00000163678.11	protein_coding	8621691,8625496,8628730,8635168,8639091,8641131,8642127,8642463,8644557,8646108	8621775,8625798,8629110,8635312,8639162,8641184,8642207,8642565,8644725,8646224	Gene ID= ENSG00000067365.14 TPM= 4.67 Transcript Type= nonsense_mediated_decay
chr16	8674565	8784575	8674565	8784575	+	ENST00000268251.12@ABAT	ENST00000268251.12	protein_coding	8674565,8735699,8746001,8748108,8750422,8757757,8764069,8764738,8766208,8768193,8768825,8772780,8774890,8776344,8779479,8781309	8674711,8735809,8746098,8748137,8750539,8757806,8764149,8764830,8766270,8768256,8768973,8772917,8775057,8776490,8779590,8784575	Gene ID= ENSG00000183044.11 TPM= 14.01 Transcript Type= protein_coding
chr16	8795180	8797648	8795180	8797648	-	ENST00000333050.6@TMEM186	ENST00000333050.6	protein_coding	8797612,8795180	8797648,8796590	Gene ID= ENSG00000184857.7 TPM= 3.5 Transcript Type= protein_coding
chr16	8807164	8815386	8807164	8815386	+	transcript1770.chr16.nic@PMM2	transcript1770.chr16.nic	protein_coding	8807164,8811638,8812991	8811178,8811713,8815386	Gene ID= ENSG00000140650.11 TPM= 24.52 Transcript Type= NA
chr16	8797817	8849331	8797817	8849331	+	ENST00000268261.8@PMM2	ENST00000268261.8	protein_coding	8797817,8801799,8804767,8806316,8811079,8811638,8812991,8847724	8797948,8801910,8804843,8806407,8811178,8811713,8813106,8849331	Gene ID= ENSG00000140650.11 TPM= 46.7 Transcript Type= protein_coding
chr16	8845797	8849886	8845797	8849886	-	transcript1778.chr16.nnic@NA	transcript1778.chr16.nnic	NA	8845797	8849886	Gene ID= novel_gene_chr16_1779 TPM= 8.17 Transcript Type= NA
chr16	8852943	8869012	8852943	8869012	-	ENST00000611932.4@CARHSP1	ENST00000611932.4	protein_coding	8868966,8860105,8859171,8858350,8852943	8869012,8860218,8859335,8858472,8855326	Gene ID= ENSG00000153048.10 TPM= 12.26 Transcript Type= protein_coding
chr16	8854913	8869009	8854913	8869009	-	ENST00000311052.9@CARHSP1	ENST00000311052.9	protein_coding	8868966,8859171,8858350,8854913	8869009,8859335,8858472,8855326	Gene ID= ENSG00000153048.10 TPM= 50.79 Transcript Type= protein_coding
chr16	8852942	8868401	8852942	8868401	-	ENST00000396593.6@CARHSP1	ENST00000396593.6	protein_coding	8868049,8859171,8858350,8852942	8868401,8859335,8858472,8855326	Gene ID= ENSG00000153048.10 TPM= 14.59 Transcript Type= protein_coding
chr16	8892772	8963921	8892772	8963921	-	transcript1782.chr16.nic@USP7	transcript1782.chr16.nic	protein_coding	8963207,8930293,8929369,8923215,8921157,8920359,8919031,8917026,8916502,8915445,8915254,8910745,8908341,8906426,8905187,8904435,8903268,8902381,8902082,8901142,8900990,8900530,8899604,8899121,8898531,8898360,8896999,8895642,8895031,8894784,8894550,8892772	8963921,8930397,8929543,8923413,8921295,8920447,8919139,8917156,8916556,8915525,8915344,8910827,8908450,8906582,8905331,8904565,8903402,8902482,8902187,8901234,8901057,8900630,8899757,8899188,8898639,8898437,8897099,8895741,8895150,8894855,8894640,8894104	Gene ID= ENSG00000187555.14 TPM= 5.25 Transcript Type= NA
chr16	8915256	8963978	8915256	8963978	-	transcript1808.chr16.nic@USP7	transcript1808.chr16.nic	protein_coding	8963207,8930293,8923215,8921157,8920359,8919031,8917026,8916502,8915445,8915256	8963978,8930397,8923413,8921295,8920447,8919139,8917156,8916556,8915525,8915344	Gene ID= ENSG00000187555.14 TPM= 2.34 Transcript Type= NA
chr16	8892094	8963484	8892094	8963484	-	ENST00000344836.8@USP7	ENST00000344836.8	protein_coding	8963207,8930293,8923215,8921157,8920359,8919031,8917026,8916502,8915445,8915254,8910745,8908341,8906426,8905187,8904435,8903268,8902381,8902082,8901142,8900990,8900530,8899604,8899121,8898531,8898360,8896999,8895642,8895031,8894784,8894550,8892094	8963484,8930397,8923413,8921295,8920447,8919139,8917156,8916556,8915525,8915344,8910827,8908450,8906582,8905331,8904565,8903402,8902482,8902187,8901234,8901057,8900630,8899757,8899188,8898639,8898437,8897099,8895741,8895150,8894855,8894640,8894104	Gene ID= ENSG00000187555.14 TPM= 4.09 Transcript Type= protein_coding
chr16	10386058	10387741	10386058	10387741	+	ENST00000566316.5@ATF7IP2	ENST00000566316.5	protein_coding	10386058,10387144,10387378	10386122,10387290,10387741	Gene ID= ENSG00000166669.13 TPM= 1.17 Transcript Type= retained_intron
chr16	10448256	10453690	10448256	10453690	+	transcript1831.chr16.nnic@NA	transcript1831.chr16.nnic	NA	10448256	10453690	Gene ID= novel_gene_chr16_1832 TPM= 4.67 Transcript Type= NA
chr16	10455984	10457943	10455984	10457943	-	transcript1833.chr16.nnic@NA	transcript1833.chr16.nnic	NA	10455984	10457943	Gene ID= novel_gene_chr16_1834 TPM= 3.5 Transcript Type= NA
chr16	10510751	10514167	10510751	10514167	-	transcript1885.chr16.nnic@NA	transcript1885.chr16.nnic	NA	10510751	10514167	Gene ID= novel_gene_chr16_1886 TPM= 2.34 Transcript Type= NA
chr16	10514207	10529962	10514207	10529962	+	transcript1864.chr16.nnic@AC027277.1	transcript1864.chr16.nnic	antisense_RNA	10514207,10525959,10528092	10515232,10526140,10529962	Gene ID= ENSG00000256013.1 TPM= 13.43 Transcript Type= NA
chr16	10523525	10524912	10523525	10524912	+	transcript1877.chr16.nnic@NA	transcript1877.chr16.nnic	NA	10523525	10524912	Gene ID= novel_gene_chr16_1878 TPM= 5.84 Transcript Type= NA
chr16	10528577	10580657	10528577	10580657	-	transcript1837.chr16.nnic@EMP2	transcript1837.chr16.nnic	protein_coding	10580549,10547540,10543570,10537928,10531624,10528577	10580657,10547677,10543660,10538074,10533092,10529678	Gene ID= ENSG00000213853.9 TPM= 24.06 Transcript Type= NA
chr16	10544180	10580632	10544180	10580632	-	ENST00000342147.4@EMP2	ENST00000342147.4	protein_coding	10580549,10544180	10580632,10547677	Gene ID= ENSG00000213853.9 TPM= 11.68 Transcript Type= retained_intron
chr16	10529075	10532031	10529075	10532031	-	transcript1883.chr16.nnic@NA	transcript1883.chr16.nnic	NA	10529075	10532031	Gene ID= novel_gene_chr16_1884 TPM= 174.56 Transcript Type= NA
chr16	10539258	10539883	10539258	10539883	-	transcript1889.chr16.nnic@NA	transcript1889.chr16.nnic	NA	10539258	10539883	Gene ID= novel_gene_chr16_1890 TPM= 2.34 Transcript Type= NA
chr16	10555588	10558806	10555588	10558806	-	transcript1891.chr16.nnic@NA	transcript1891.chr16.nnic	NA	10555588	10558806	Gene ID= novel_gene_chr16_1892 TPM= 3.5 Transcript Type= NA
chr16	10560847	10563223	10560847	10563223	+	transcript1881.chr16.nnic@NA	transcript1881.chr16.nnic	NA	10560847	10563223	Gene ID= novel_gene_chr16_1882 TPM= 3.5 Transcript Type= NA
chr16	10743845	10769351	10743845	10769351	+	ENST00000283027.9@NUBP1	ENST00000283027.9	protein_coding	10743845,10743961,10747143,10752610,10755721,10756690,10757873,10761364,10761757,10767949,10769047	10743882,10744065,10747276,10752678,10755753,10756780,10758027,10761474,10761859,10768032,10769351	Gene ID= ENSG00000103274.10 TPM= 36.78 Transcript Type= protein_coding
chr16	10743855	10769351	10743855	10769351	+	ENST00000433392.6@NUBP1	ENST00000433392.6	protein_coding	10743855,10743961,10747143,10752610,10756690,10757873,10761364,10761757,10767949,10769047	10743882,10744065,10747276,10752678,10756780,10758027,10761474,10761859,10768032,10769351	Gene ID= ENSG00000103274.10 TPM= 1.75 Transcript Type= protein_coding
chr16	10766676	10818785	10766676	10818785	-	ENST00000299866.12@TVP23A	ENST00000299866.12	protein_coding	10818485,10818103,10774952,10774039,10773313,10771670,10770272,10766676	10818785,10818182,10775096,10774128,10773441,10771798,10770331,10769101	Gene ID= ENSG00000166676.14 TPM= 1.17 Transcript Type= protein_coding
chr16	10766676	10818651	10766676	10818651	-	ENST00000573360.5@TVP23A	ENST00000573360.5	protein_coding	10818485,10818103,10774952,10774039,10773313,10771670,10770272,10766676	10818651,10818182,10775547,10774128,10773441,10771798,10770331,10769101	Gene ID= ENSG00000166676.14 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr16	10923372	10927447	10923372	10927447	+	transcript1924.chr16.nnic@NA	transcript1924.chr16.nnic	NA	10923372	10927447	Gene ID= novel_gene_chr16_1925 TPM= 2.34 Transcript Type= NA
chr16	10928891	10942468	10928891	10942468	-	transcript1921.chr16.nnic@DEXI	transcript1921.chr16.nnic	protein_coding	10941569,10933900,10928891	10942468,10934004,10929559	Gene ID= ENSG00000182108.9 TPM= 4.09 Transcript Type= NA
chr16	10928891	10942460	10928891	10942460	-	ENST00000331808.4@DEXI	ENST00000331808.4	protein_coding	10941569,10928891	10942460,10929559	Gene ID= ENSG00000182108.9 TPM= 63.63 Transcript Type= protein_coding
chr16	10933903	10936280	10933903	10936280	+	ENST00000625054.1@AC133065.6	ENST00000625054.1	TEC	10933903	10936280	Gene ID= ENSG00000280153.1 TPM= 2.34 Transcript Type= TEC
chr16	10935990	10939286	10935990	10939286	-	transcript1928.chr16.nnic@NA	transcript1928.chr16.nnic	NA	10935990	10939286	Gene ID= novel_gene_chr16_1929 TPM= 3.5 Transcript Type= NA
chr16	10944488	11182189	10944488	11182189	+	ENST00000409790.5@CLEC16A	ENST00000409790.5	protein_coding	10944488,10957782,10962455,10969161,10971125,10972554,10972938,10977225,10979329,10982878,11003074,11020193,11024821,11039754,11042254,11044028,11047292,11051513,11060902,11120615,11123742,11125979,11166388,11178335	10944797,10957910,10962588,10969309,10971230,10972559,10973061,10977399,10979382,10982991,11003305,11020325,11024921,11039876,11042363,11044072,11047342,11051641,11061022,11120766,11123946,11126146,11166552,11182189	Gene ID= ENSG00000038532.14 TPM= 5.84 Transcript Type= protein_coding
chr16	10944561	11003989	10944561	11003989	+	transcript1936.chr16.nic@CLEC16A	transcript1936.chr16.nic	protein_coding	10944561,10957782,10962455,10969161,10971125,10972938,10977225,10979329,10982878,11003074	10944797,10957910,10962588,10969309,10971230,10973061,10977399,10979382,10982991,11003989	Gene ID= ENSG00000038532.14 TPM= 9.34 Transcript Type= NA
chr16	11123900	11182181	11123900	11182181	+	ENST00000261657.5@CLEC16A	ENST00000261657.5	protein_coding	11123900,11125979,11166388,11174154,11178335	11123946,11126146,11166552,11174277,11182181	Gene ID= ENSG00000038532.14 TPM= 31.53 Transcript Type= protein_coding
chr16	10969359	10972280	10969359	10972280	-	transcript1943.chr16.nnic@NA	transcript1943.chr16.nnic	NA	10969359	10972280	Gene ID= novel_gene_chr16_1944 TPM= 3.5 Transcript Type= NA
chr16	10973888	10978952	10973888	10978952	-	transcript1940.chr16.nnic@NA	transcript1940.chr16.nnic	NA	10978527,10975912,10973888	10978952,10976012,10975056	Gene ID= novel_gene_chr16_1941 TPM= 2.34 Transcript Type= NA
chr16	11254405	11256179	11254405	11256179	-	ENST00000332029.2@SOCS1	ENST00000332029.2	protein_coding	11256079,11254405	11256179,11255528	Gene ID= ENSG00000185338.4 TPM= 39.7 Transcript Type= protein_coding
chr16	11345431	11351762	11345431	11351762	+	ENST00000312499.5@RMI2	ENST00000312499.5	protein_coding	11345431,11350642	11345766,11351762	Gene ID= ENSG00000175643.8 TPM= 1.17 Transcript Type= protein_coding
chr16	11547722	11587563	11547722	11587563	-	ENST00000571688.5@LITAF	ENST00000571688.5	protein_coding	11587338,11556511,11553533,11547722	11587563,11556735,11553689,11549745	Gene ID= ENSG00000189067.12 TPM= 7.79 Transcript Type= protein_coding
chr16	11547726	11586950	11547726	11586950	-	ENST00000622633.4@LITAF	ENST00000622633.4	protein_coding	11586886,11556511,11553533,11547726	11586950,11556735,11553689,11549745	Gene ID= ENSG00000189067.12 TPM= 17.13 Transcript Type= protein_coding
chr16	11548603	11556736	11548603	11556736	-	ENST00000381810.7@LITAF	ENST00000381810.7	protein_coding	11556511,11553533,11548603	11556736,11553689,11549746	Gene ID= ENSG00000189067.12 TPM= 45.54 Transcript Type= protein_coding
chr16	11668414	11679159	11668414	11679159	+	ENST00000329565.5@SNN	ENST00000329565.5	protein_coding	11668414,11675975	11668540,11679159	Gene ID= ENSG00000184602.5 TPM= 196.16 Transcript Type= protein_coding
chr16	11679083	11742806	11679083	11742806	-	transcript1970.chr16.nnic@TXNDC11	transcript1970.chr16.nnic	protein_coding	11742477,11736017,11733982,11730645,11721577,11714354,11700452,11698125,11691290,11688303,11687857,11684165,11679083	11742806,11736233,11734079,11730774,11721670,11714473,11700564,11698325,11692082,11688445,11687966,11684245,11679837	Gene ID= ENSG00000153066.12 TPM= 8.15 Transcript Type= NA
chr16	11679083	11742919	11679083	11742919	-	transcript1979.chr16.nic@TXNDC11	transcript1979.chr16.nic	protein_coding	11742477,11736017,11733982,11721577,11700452,11698125,11691290,11688303,11687857,11684165,11679083	11742919,11736233,11734079,11721670,11700564,11698325,11692082,11688445,11687966,11684245,11679837	Gene ID= ENSG00000153066.12 TPM= 19.83 Transcript Type= NA
chr16	11679083	11742862	11679083	11742862	-	transcript1980.chr16.nic@TXNDC11	transcript1980.chr16.nic	protein_coding	11742477,11736017,11733982,11730645,11721577,11698125,11691290,11688303,11687857,11684165,11679083	11742862,11736233,11734079,11730774,11721670,11698325,11692082,11688445,11687966,11684245,11679837	Gene ID= ENSG00000153066.12 TPM= 14.37 Transcript Type= NA
chr16	11679083	11742860	11679083	11742860	-	transcript1984.chr16.nic@TXNDC11	transcript1984.chr16.nic	protein_coding	11742477,11736017,11733982,11721577,11698125,11691290,11688303,11687857,11684165,11679083	11742860,11736233,11734079,11721670,11698325,11692082,11688445,11687966,11684245,11679837	Gene ID= ENSG00000153066.12 TPM= 9.7 Transcript Type= NA
chr16	11679080	11742878	11679080	11742878	-	ENST00000283033.9@TXNDC11	ENST00000283033.9	protein_coding	11742477,11736017,11733982,11730645,11721577,11700452,11698125,11691290,11688303,11687857,11684165,11679080	11742878,11736233,11734079,11730774,11721670,11700564,11698325,11692082,11688445,11687966,11684245,11679837	Gene ID= ENSG00000153066.12 TPM= 256.85 Transcript Type= protein_coding
chr16	11679083	11742838	11679083	11742838	-	ENST00000356957.7@TXNDC11	ENST00000356957.7	protein_coding	11742477,11736017,11733982,11730645,11721577,11703670,11700452,11698125,11691290,11688303,11687857,11684165,11679083	11742838,11736233,11734079,11730774,11721670,11703750,11700564,11698325,11692082,11688445,11687966,11684245,11679837	Gene ID= ENSG00000153066.12 TPM= 3.48 Transcript Type= protein_coding
chr16	11750595	11797281	11750595	11797281	-	transcript2007.chr16.nic@ZC3H7A	transcript2007.chr16.nic	protein_coding	11797124,11782287,11781425,11779166,11776751,11776452,11776320,11774980,11774236,11770783,11769031,11768315,11767417,11765489,11765053,11763478,11762671,11761910,11761468,11758431,11756237,11752669,11750595	11797281,11782388,11781464,11779363,11776909,11776532,11776358,11775013,11774519,11770987,11769095,11768501,11767578,11765685,11765153,11763659,11762747,11762043,11761511,11758539,11756370,11752832,11751506	Gene ID= ENSG00000122299.11 TPM= 3.5 Transcript Type= NA
chr16	11750595	11797281	11750595	11797281	-	transcript2009.chr16.nic@ZC3H7A	transcript2009.chr16.nic	protein_coding	11797124,11782287,11781425,11779166,11776751,11776452,11774980,11774236,11770783,11769031,11768315,11767417,11765489,11765053,11763478,11762671,11761910,11761406,11758431,11756237,11752669,11750595	11797281,11782388,11781464,11779363,11776909,11776532,11776358,11774519,11770987,11769095,11768501,11767578,11765685,11765153,11763659,11762747,11762043,11761511,11758539,11756370,11752832,11751506	Gene ID= ENSG00000122299.11 TPM= 6.42 Transcript Type= NA
chr16	11750586	11797267	11750586	11797267	-	ENST00000355758.8@ZC3H7A	ENST00000355758.8	protein_coding	11797124,11782287,11781425,11779166,11776751,11776452,11776320,11774980,11774236,11770783,11769031,11768315,11767417,11765489,11765053,11763478,11762671,11761910,11761406,11758431,11756237,11752669,11750586	11797267,11782388,11781464,11779363,11776909,11776532,11776358,11775013,11774519,11770987,11769095,11768501,11767578,11765685,11765153,11763659,11762747,11762043,11761511,11758539,11756370,11752832,11751506	Gene ID= ENSG00000122299.11 TPM= 79.98 Transcript Type= protein_coding
chr16	11797468	11798275	11797468	11798275	+	ENST00000615722.1@AC010654.1	ENST00000615722.1	lincRNA	11797468	11798275	Gene ID= ENSG00000277369.1 TPM= 1.17 Transcript Type= lincRNA
chr16	11833850	11851585	11833850	11851585	-	ENST00000571133.5@RSL1D1	ENST00000571133.5	protein_coding	11851408,11850279,11847668,11846695,11846501,11841907,11841695,11839695,11833850	11851585,11850418,11847806,11846843,11846602,11842000,11841820,11839985,11838113	Gene ID= ENSG00000171490.12 TPM= 218.34 Transcript Type= protein_coding
chr16	11872679	11915878	11872679	11915878	-	ENST00000439887.6@GSPT1	ENST00000439887.6	protein_coding	11915369,11897994,11897840,11896558,11894954,11891062,11887570,11886777,11886471,11885181,11883015,11877407,11876086,11875761,11872679	11915878,11898035,11897881,11896782,11894987,11891139,11887750,11886931,11886611,11885274,11883095,11877580,11876175,11875929,11873171	Gene ID= ENSG00000103342.12 TPM= 53.13 Transcript Type= protein_coding
chr16	11901071	11902099	11901071	11902099	+	transcript2053.chr16.nnic@NA	transcript2053.chr16.nnic	NA	11901071	11902099	Gene ID= novel_gene_chr16_2054 TPM= 3.5 Transcript Type= NA
chr16	11976723	12525344	11976723	12525344	+	transcript2056.chr16.nnic@SNX29	transcript2056.chr16.nnic	protein_coding	11976723,11999297,12002991,12027320,12042897,12046384,12048372,12051847,12061528,12069057,12078833,12083345,12126633,12129630,12199601,12277933,12356163,12398446,12403448,12477719,12524702	11976813,11999358,12003043,12027444,12043077,12046454,12048620,12052222,12061646,12069132,12078915,12083394,12126696,12129758,12199683,12278036,12356279,12398501,12403529,12477859,12525344	Gene ID= ENSG00000048471.13 TPM= 2.72 Transcript Type= NA
chr16	11976723	12525344	11976723	12525344	+	transcript2057.chr16.nic@SNX29	transcript2057.chr16.nic	protein_coding	11976723,11999297,12002991,12027320,12042897,12046384,12048372,12051847,12061528,12069057,12078833,12126633,12129630,12199601,12277933,12356163,12398446,12403448,12477719,12524702	11976813,11999358,12003043,12027444,12043077,12046454,12048620,12052222,12061646,12069132,12078915,12126696,12129758,12199683,12278036,12356279,12398501,12403529,12477859,12525344	Gene ID= ENSG00000048471.13 TPM= 5.06 Transcript Type= NA
chr16	11976723	12135737	11976723	12135737	+	transcript2059.chr16.nic@SNX29	transcript2059.chr16.nic	protein_coding	11976723,11999297,12002991,12027320,12042897,12046384,12048372,12051847,12061528,12069057,12078833,12126633,12129630,12135551	11976813,11999358,12003043,12027444,12043077,12046454,12048620,12052222,12061646,12069132,12078915,12126696,12129758,12135737	Gene ID= ENSG00000048471.13 TPM= 2.72 Transcript Type= NA
chr16	12571240	12574194	12571240	12574194	+	transcript2061.chr16.nnic@NA	transcript2061.chr16.nnic	NA	12571240	12574194	Gene ID= novel_gene_chr16_2062 TPM= 3.5 Transcript Type= NA
chr16	12659799	12804017	12659799	12804017	-	ENST00000381774.8@CPPED1	ENST00000381774.8	protein_coding	12803707,12781185,12704624,12659799	12804017,12781403,12705049,12665115	Gene ID= ENSG00000103381.11 TPM= 2.34 Transcript Type= protein_coding
chr16	14007037	14016027	14007037	14016027	-	transcript2073.chr16.nnic@LINC02185	transcript2073.chr16.nnic	lincRNA	14015862,14013372,14009968,14007037	14016027,14013458,14010145,14009797	Gene ID= ENSG00000262097.1 TPM= 4.67 Transcript Type= NA
chr16	14071314	14248783	14071314	14248783	+	transcript2081.chr16.nic@MKL2	transcript2081.chr16.nic	protein_coding	14071314,14079290,14140544,14210243,14212354,14213545,14217126,14218820,14234146,14240237,14245528,14246473	14071365,14079354,14140760,14210308,14212409,14213620,14217287,14218998,14234283,14240484,14245660,14248783	Gene ID= ENSG00000186260.16 TPM= 2.34 Transcript Type= NA
chr16	14071322	14266771	14071322	14266771	+	ENST00000571589.5@MKL2	ENST00000571589.5	protein_coding	14071322,14079290,14140544,14210243,14212354,14213545,14217126,14218820,14234146,14240237,14245528,14246473,14248926,14251862,14252365,14258101,14260909	14071365,14079354,14140760,14210308,14212409,14213620,14217287,14218998,14234283,14240484,14245660,14247507,14249081,14252023,14252502,14258161,14266771	Gene ID= ENSG00000186260.16 TPM= 16.35 Transcript Type= protein_coding
chr16	14243866	14247246	14243866	14247246	-	transcript2085.chr16.nnic@NA	transcript2085.chr16.nnic	NA	14243866	14247246	Gene ID= novel_gene_chr16_2086 TPM= 3.5 Transcript Type= NA
chr16	14302238	14303239	14302238	14303239	+	transcript2087.chr16.nnic@NA	transcript2087.chr16.nnic	NA	14302238	14303239	Gene ID= novel_gene_chr16_2088 TPM= 2.34 Transcript Type= NA
chr16	14435701	14630267	14435701	14630267	-	ENST00000437198.6@PARN	ENST00000437198.6	protein_coding	14630107,14629597,14628172,14627269,14627106,14617590,14610644,14609058,14608281,14606484,14604146,14599904,14593301,14586318,14584749,14584347,14582181,14580874,14555654,14554065,14552021,14482638,14446888,14435701	14630267,14629674,14628251,14627336,14627187,14617650,14610809,14609123,14608319,14606526,14604226,14599960,14593378,14586361,14584791,14584422,14582291,14580943,14555709,14554151,14552095,14482827,14447081,14436772	Gene ID= ENSG00000140694.16 TPM= 31.53 Transcript Type= protein_coding
chr16	14435701	14630262	14435701	14630262	-	transcript2099.chr16.nnic@PARN	transcript2099.chr16.nnic	protein_coding	14630107,14629597,14628172,14627269,14627106,14617590,14610644,14609058,14608281,14606484,14604146,14599904,14593301,14586318,14584749,14584347,14582181,14580874,14555654,14552021,14482638,14446888,14435701	14630262,14629674,14628251,14627336,14627187,14617650,14610809,14609123,14608319,14606526,14604226,14599960,14593378,14586361,14584791,14584422,14582291,14580943,14555709,14552095,14482827,14447081,14436772	Gene ID= ENSG00000140694.16 TPM= 4.67 Transcript Type= NA
chr16	14632815	14669236	14632815	14669236	+	ENST00000261658.6@BFAR	ENST00000261658.6	protein_coding	14632815,14644274,14648388,14649804,14655066,14661892,14664869,14667635	14633018,14644609,14648592,14649973,14655210,14662065,14665071,14669236	Gene ID= ENSG00000103429.10 TPM= 44.95 Transcript Type= protein_coding
chr16	14632811	14669236	14632811	14669236	+	transcript2113.chr16.nic@BFAR	transcript2113.chr16.nic	protein_coding	14632811,14644274,14649804,14655066,14661892,14664869,14667635	14633018,14644609,14649973,14655210,14662065,14665071,14669236	Gene ID= ENSG00000103429.10 TPM= 7.59 Transcript Type= NA
chr16	14632932	14650589	14632932	14650589	+	ENST00000562442.5@BFAR	ENST00000562442.5	protein_coding	14632932,14644274,14648388,14649804	14633018,14644609,14648592,14650589	Gene ID= ENSG00000103429.10 TPM= 22.18 Transcript Type= protein_coding
chr16	14632931	14650556	14632931	14650556	+	ENST00000566520.5@BFAR	ENST00000566520.5	protein_coding	14632931,14644274,14649804	14633018,14644609,14650556	Gene ID= ENSG00000103429.10 TPM= 2.34 Transcript Type= retained_intron
chr16	14632931	14668350	14632931	14668350	+	ENST00000563971.5@BFAR	ENST00000563971.5	protein_coding	14632931,14644274,14655066,14661892,14664869,14667635	14633018,14644609,14655210,14662065,14665071,14668350	Gene ID= ENSG00000103429.10 TPM= 3.5 Transcript Type= protein_coding
chr16	14672545	14694669	14672545	14694669	-	ENST00000438167.7@PLA2G10	ENST00000438167.7	protein_coding	14694133,14690495,14688165,14672545	14694669,14690645,14688271,14672749	Gene ID= ENSG00000069764.9 TPM= 4.67 Transcript Type= protein_coding
chr16	14833681	14896160	14833681	14896160	+	ENST00000287667.11@NOMO1	ENST00000287667.11	protein_coding	14833681,14838407,14841362,14844674,14846577,14848899,14852430,14853467,14853937,14857217,14857505,14863013,14864585,14865024,14866555,14868548,14871621,14872234,14875036,14875340,14876359,14876664,14878721,14880015,14881544,14882594,14884372,14886761,14889096,14894998,14895514	14834016,14838496,14841407,14844774,14846683,14848971,14852582,14853604,14854026,14857322,14857655,14863187,14864726,14865155,14866691,14868635,14871684,14872329,14875254,14875422,14876518,14876790,14878834,14880142,14881685,14882677,14884482,14886862,14889215,14895090,14896160	Gene ID= ENSG00000103512.14 TPM= 239.36 Transcript Type= protein_coding
chr16	14833794	14856000	14833794	14856000	+	transcript2138.chr16.nic@NOMO1	transcript2138.chr16.nic	protein_coding	14833794,14838407,14841362,14844674,14846577,14848899,14852430,14853467,14853937	14834016,14838496,14841407,14844774,14846683,14848971,14852582,14853604,14856000	Gene ID= ENSG00000103512.14 TPM= 4.67 Transcript Type= NA
chr16	14975105	15037687	14975105	15037687	+	transcript2166.chr16.nnic@PDXDC1	transcript2166.chr16.nnic	protein_coding	14975105,14997753,14998340,15001776,15004187,15006394,15008779,15009681,15016129,15017120,15017321,15018840,15022704,15026643,15028878,15029951,15031735,15032861,15033278,15034286,15034457,15035449,15035951	14975220,14997826,14998405,15001856,15004333,15006583,15008847,15009759,15016213,15017168,15017422,15018965,15022754,15026706,15028966,15030056,15031906,15032979,15033399,15034378,15034553,15035553,15037687	Gene ID= ENSG00000179889.18 TPM= 6.07 Transcript Type= NA
chr16	14983305	15037687	14983305	15037687	+	transcript2169.chr16.nnic@PDXDC1	transcript2169.chr16.nnic	protein_coding	14983305,14997753,14998340,15001776,15004187,15006394,15008779,15009681,15016129,15017120,15017321,15018840,15022704,15026643,15028878,15029951,15031735,15032861,15033278,15034286,15034457,15035449,15036016	14984658,14997826,14998405,15001856,15004333,15006583,15008847,15009759,15016213,15017168,15017422,15018965,15022754,15026706,15028966,15030056,15031906,15032979,15033399,15034378,15034553,15035553,15037687	Gene ID= ENSG00000179889.18 TPM= 24.17 Transcript Type= NA
chr16	14975062	15151527	14975062	15151527	+	transcript2185.chr16.nnic@PDXDC1	transcript2185.chr16.nnic	protein_coding	14975062,14997753,14998340,15001776,15004187,15006394,15008779,15009681,15016129,15017120,15017321,15018840,15022704,15026643,15028878,15029951,15138879,15150199	14975220,14997826,14998405,15001856,15004333,15006583,15008847,15009759,15016213,15017168,15017422,15018965,15022754,15026706,15028966,15030056,15139950,15151527	Gene ID= ENSG00000179889.18 TPM= 20.28 Transcript Type= NA
chr16	15027875	15151953	15027875	15151953	+	transcript2223.chr16.nnic@PDXDC1	transcript2223.chr16.nnic	protein_coding	15027875,15138817,15150199	15030406,15139950,15151953	Gene ID= ENSG00000179889.18 TPM= 24.9 Transcript Type= NA
chr16	14975105	15037687	14975105	15037687	+	ENST00000570001.5@PDXDC1	ENST00000570001.5	protein_coding	14975105,14997753,14998340,15001776,15004187,15006394,15008779,15009681,15016129,15017120,15017321,15018840,15022704,15026643,15028878,15029951,15031735,15033278,15034286,15034457,15035449,15036016	14975220,14997826,14998405,15001856,15004333,15006583,15008847,15009759,15016213,15017168,15017422,15018965,15022754,15026706,15028966,15030056,15032979,15033399,15034378,15034553,15035553,15037687	Gene ID= ENSG00000179889.18 TPM= 4.32 Transcript Type= retained_intron
chr16	14991528	14994090	14991528	14994090	-	transcript2230.chr16.nnic@NA	transcript2230.chr16.nnic	NA	14991528	14994090	Gene ID= novel_gene_chr16_2231 TPM= 3.5 Transcript Type= NA
chr16	15037854	15056079	15037854	15056079	-	ENST00000622833.4@NTAN1	ENST00000622833.4	protein_coding	15055891,15047442,15044334,15041623,15041068,15039969,15038574,15037854	15056079,15047550,15044407,15041676,15041121,15040066,15038687,15038210	Gene ID= ENSG00000157045.8 TPM= 1.75 Transcript Type= protein_coding
chr16	15037853	15056064	15037853	15056064	-	ENST00000287706.7@NTAN1	ENST00000287706.7	protein_coding	15055891,15047997,15047855,15047442,15044334,15041623,15041068,15039969,15038574,15037853	15056064,15048099,15047920,15047550,15044407,15041676,15041121,15040066,15038687,15038210	Gene ID= ENSG00000157045.8 TPM= 48.46 Transcript Type= protein_coding
chr16	15045341	15046722	15045341	15046722	+	transcript2228.chr16.nnic@NA	transcript2228.chr16.nnic	NA	15045341	15046722	Gene ID= novel_gene_chr16_2229 TPM= 7.01 Transcript Type= NA
chr16	15060022	15094317	15060022	15094317	-	ENST00000198767.10@RRN3	ENST00000198767.10	protein_coding	15094145,15092509,15091315,15086365,15086129,15085639,15084642,15083513,15079998,15076558,15074723,15072950,15071121,15070070,15068169,15065219,15063196,15060022	15094317,15092614,15091371,15086454,15086258,15085698,15084705,15083582,15080096,15076650,15074861,15073080,15071251,15070254,15068277,15065371,15063283,15061905	Gene ID= ENSG00000085721.12 TPM= 44.37 Transcript Type= protein_coding
chr16	15126657	15129243	15126657	15129243	-	transcript2232.chr16.nnic@NA	transcript2232.chr16.nnic	NA	15126657	15129243	Gene ID= novel_gene_chr16_2233 TPM= 5.84 Transcript Type= NA
chr16	15434295	15588259	15434295	15588259	+	ENST00000300006.8@C16orf45	ENST00000300006.8	protein_coding	15434295,15515305,15567983,15581217,15583156,15586717	15434759,15515428,15568056,15581331,15583238,15588259	Gene ID= ENSG00000166780.10 TPM= 51.37 Transcript Type= protein_coding
chr16	15434475	15587972	15434475	15587972	+	ENST00000566490.5@C16orf45	ENST00000566490.5	protein_coding	15434475,15515305,15567983,15581217,15586717	15434759,15515428,15568056,15581331,15587972	Gene ID= ENSG00000166780.10 TPM= 1.17 Transcript Type= protein_coding
chr16	15594386	15643166	15594386	15643166	-	ENST00000396368.7@MARF1	ENST00000396368.7	protein_coding	15643018,15639090,15635656,15634757,15633617,15631381,15630332,15625372,15625016,15624769,15622934,15621733,15620451,15617299,15617052,15615830,15612557,15611592,15610975,15609523,15608291,15604168,15601991,15600641,15600428,15598854,15594386	15643166,15639291,15636342,15634931,15633843,15631498,15630504,15625800,15625173,15624927,15623123,15621911,15620531,15617535,15617171,15616005,15612777,15611734,15611108,15609725,15608518,15604398,15602203,15600701,15600553,15599024,15596937	Gene ID= ENSG00000166783.21 TPM= 23.35 Transcript Type= protein_coding
chr16	15594388	15601863	15594388	15601863	-	ENST00000552771.5@MARF1	ENST00000552771.5	protein_coding	15600428,15598854,15594388	15601863,15599024,15596937	Gene ID= ENSG00000166783.21 TPM= 14.01 Transcript Type= retained_intron
chr16	15650257	15725149	15650257	15725149	+	transcript2257.chr16.nic@NDE1	transcript2257.chr16.nic	protein_coding	15650257,15664736,15667286,15677801,15687375,15691144,15694165,15696709,15699729,15724191	15650294,15664861,15667439,15677949,15687511,15691323,15694256,15696860,15699854,15725149	Gene ID= ENSG00000072864.14 TPM= 2.92 Transcript Type= NA
chr16	15650202	15725149	15650202	15725149	+	transcript2264.chr16.nnic@NDE1	transcript2264.chr16.nnic	protein_coding	15650202,15664736,15667286,15677801,15687375,15691144,15694165,15724191	15650294,15664861,15667439,15677949,15687511,15691323,15694256,15725149	Gene ID= ENSG00000072864.14 TPM= 2.92 Transcript Type= NA
chr16	15738635	15857029	15738635	15857029	-	transcript2253.chr16.nic@MYH11	transcript2253.chr16.nic	protein_coding	15856941,15837908,15823255,15798660,15786630,15782385,15778780,15776078,15771569,15763796,15760540,15759576,15757827,15756341,15753394,15750138,15748047,15747874,15747570,15745129,15741760,15741463,15740051,15738635	15857029,15838269,15823411,15798687,15786732,15782477,15778843,15776176,15771712,15763891,15760658,15759728,15758000,15756514,15753508,15750331,15748168,15747943,15747730,15745237,15741891,15741669,15740188,15738688	Gene ID= ENSG00000133392.17 TPM= 6.42 Transcript Type= NA
chr16	15726361	15748504	15726361	15748504	-	transcript2266.chr16.nnic@MYH11	transcript2266.chr16.nnic	protein_coding	15747650,15743190,15734316,15732485,15726361	15748504,15743311,15734462,15732950,15727002	Gene ID= ENSG00000133392.17 TPM= 5.84 Transcript Type= NA
chr16	15726361	15748436	15726361	15748436	-	transcript2269.chr16.nnic@MYH11	transcript2269.chr16.nnic	protein_coding	15747650,15743190,15732485,15726361	15748436,15743311,15734462,15727002	Gene ID= ENSG00000133392.17 TPM= 4.67 Transcript Type= NA
chr16	15703172	15857011	15703172	15857011	-	ENST00000396324.7@MYH11	ENST00000396324.7	protein_coding	15856941,15837908,15823255,15798660,15786630,15784698,15782385,15778780,15776078,15771569,15763796,15760540,15759576,15757827,15756341,15753394,15750138,15748047,15747874,15747570,15745129,15741760,15741463,15740051,15738565,15737449,15735366,15732564,15726848,15724888,15724647,15724161,15721422,15720839,15720151,15719585,15719220,15718315,15717140,15715164,15714909,15703172	15857011,15838269,15823411,15798687,15786732,15784718,15782477,15778843,15776176,15771712,15763891,15760658,15759728,15758000,15756514,15753508,15750331,15748168,15747943,15747730,15745237,15741891,15741669,15740188,15738688,15737620,15735578,15732708,15727054,15724992,15724799,15724409,15721634,15721051,15720312,15719713,15719308,15718438,15717348,15715272,15715081,15704123	Gene ID= ENSG00000133392.17 TPM= 161.91 Transcript Type= protein_coding
chr16	15703172	15857011	15703172	15857011	-	ENST00000452625.6@MYH11	ENST00000452625.6	protein_coding	15856941,15837908,15823255,15798660,15786630,15784698,15782385,15778780,15776078,15771569,15763796,15760540,15759576,15757827,15756341,15753394,15750138,15748047,15747874,15747570,15745129,15741760,15741463,15740051,15738565,15737449,15735366,15732564,15726848,15724888,15724647,15724161,15721422,15720839,15720151,15719585,15719220,15718315,15717140,15715164,15714909,15708803,15703172	15857011,15838269,15823411,15798687,15786732,15784718,15782477,15778843,15776176,15771712,15763891,15760658,15759728,15758000,15756514,15753508,15750331,15748168,15747943,15747730,15745237,15741891,15741669,15740188,15738688,15737620,15735578,15732708,15727054,15724992,15724799,15724409,15721634,15721051,15720312,15719713,15719308,15718438,15717348,15715272,15715081,15708841,15704123	Gene ID= ENSG00000133392.17 TPM= 53.32 Transcript Type= protein_coding
chr16	15703991	15857033	15703991	15857033	-	ENST00000300036.5@MYH11	ENST00000300036.5	protein_coding	15856941,15837908,15823255,15798660,15786630,15782385,15778780,15776078,15771569,15763796,15760540,15759576,15757827,15756341,15753394,15750138,15748047,15747874,15747570,15745129,15741760,15741463,15740051,15738565,15737449,15735366,15732564,15726848,15724888,15724647,15724161,15721422,15720839,15720151,15719585,15719220,15718315,15717140,15715164,15714909,15703991	15857033,15838269,15823411,15798687,15786732,15782477,15778843,15776176,15771712,15763891,15760658,15759728,15758000,15756514,15753508,15750331,15748168,15747943,15747730,15745237,15741891,15741669,15740188,15738688,15737620,15735578,15732708,15727054,15724992,15724799,15724409,15721634,15721051,15720312,15719713,15719308,15718438,15717348,15715272,15715081,15704123	Gene ID= ENSG00000133392.17 TPM= 11.87 Transcript Type= protein_coding
chr16	15785015	15857028	15785015	15857028	-	ENST00000571505.1@MYH11	ENST00000571505.1	protein_coding	15856941,15837908,15823255,15798660,15785015	15857028,15838269,15823411,15798687,15786732	Gene ID= ENSG00000133392.17 TPM= 1.17 Transcript Type= retained_intron
chr16	15865720	15888615	15865720	15888615	-	ENST00000255759.10@FOPNL	ENST00000255759.10	protein_coding	15888558,15884008,15879804,15873491,15865720	15888615,15884205,15879888,15873627,15867516	Gene ID= ENSG00000133393.12 TPM= 53.71 Transcript Type= protein_coding
chr16	15867307	15888623	15867307	15888623	-	ENST00000572415.5@FOPNL	ENST00000572415.5	protein_coding	15888558,15884008,15882949,15879804,15873491,15867307	15888623,15884205,15883048,15879888,15873627,15867516	Gene ID= ENSG00000133393.12 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr16	15949577	16143062	15949577	16143062	+	ENST00000399410.7@ABCC1	ENST00000399410.7	protein_coding	15949577,16007816,16009776,16014491,16016496,16033109,16036472,16044450,16045836,16048142,16052724,16056092,16068156,16071642,16076326,16079352,16083366,16086824,16090405,16102627,16106738,16111375,16114766,16121975,16124789,16125810,16131789,16134350,16136478,16138364,16141173	15949799,16007992,16009901,16014628,16016621,16033170,16036603,16044680,16046013,16048303,16052816,16056295,16068302,16071729,16076401,16079478,16083542,16086991,16090588,16102717,16106873,16111582,16115076,16122174,16124915,16125911,16131935,16134508,16136644,16138558,16143062	Gene ID= ENSG00000103222.18 TPM= 54.88 Transcript Type= protein_coding
chr16	16108601	16110874	16108601	16110874	-	transcript2297.chr16.nnic@NA	transcript2297.chr16.nnic	NA	16108601	16110874	Gene ID= novel_gene_chr16_2298 TPM= 2.34 Transcript Type= NA
chr16	16143532	16148093	16143532	16148093	-	transcript2316.chr16.nnic@NA	transcript2316.chr16.nnic	NA	16143532	16148093	Gene ID= novel_gene_chr16_2317 TPM= 10.51 Transcript Type= NA
chr16	16170087	16223522	16170087	16223522	-	transcript2309.chr16.nnic@ABCC6	transcript2309.chr16.nnic	protein_coding	16223399,16221649,16219822,16219554,16214324,16212185,16208728,16203410,16202001,16198021,16192830,16190164,16188831,16187124,16184959,16182804,16182412,16178798,16177452,16175911,16173284,16170087	16223522,16221831,16219947,16219682,16214449,16212246,16208859,16203613,16202178,16198182,16192922,16190367,16188974,16187211,16185034,16182930,16182588,16178965,16177626,16175986,16173404,16170912	Gene ID= ENSG00000091262.15 TPM= 2.34 Transcript Type= NA
chr16	16149566	16164187	16149566	16164187	-	transcript2310.chr16.nic@ABCC6	transcript2310.chr16.nic	protein_coding	16162993,16161438,16159482,16157663,16154873,16154628,16150578,16149566	16164187,16161564,16159583,16157809,16155031,16154794,16150772,16150241	Gene ID= ENSG00000091262.15 TPM= 4.67 Transcript Type= NA
chr16	16221187	16223467	16221187	16223467	-	ENST00000575728.1@ABCC6	ENST00000575728.1	protein_coding	16223399,16221187	16223467,16221831	Gene ID= ENSG00000091262.15 TPM= 9.34 Transcript Type= protein_coding
chr16	16232495	16294814	16232495	16294814	+	ENST00000399336.8@NOMO3	ENST00000399336.8	protein_coding	16232495,16236901,16239851,16243161,16245068,16247395,16250928,16251963,16252433,16255720,16256008,16261502,16263074,16263513,16265043,16267044,16270121,16270733,16273689,16273993,16275012,16275317,16277370,16278662,16280189,16281239,16283016,16285405,16287743,16293652,16294168	16232831,16236990,16239896,16243261,16245174,16247467,16251080,16252100,16252522,16255825,16256158,16261676,16263215,16263644,16265179,16267131,16270184,16270828,16273907,16274075,16275171,16275443,16277483,16278789,16280330,16281322,16283126,16285506,16287862,16293744,16294814	Gene ID= ENSG00000103226.17 TPM= 155.87 Transcript Type= protein_coding
chr16	16232526	16254501	16232526	16254501	+	transcript2320.chr16.nic@NOMO3	transcript2320.chr16.nic	protein_coding	16232526,16236901,16239851,16243161,16245068,16247395,16250928,16251963,16252433	16232831,16236990,16239896,16243261,16245174,16247467,16251080,16252100,16254501	Gene ID= ENSG00000103226.17 TPM= 5.25 Transcript Type= NA
chr16	17227023	17470634	17227023	17470634	-	transcript2339.chr16.nnic@XYLT1	transcript2339.chr16.nnic	protein_coding	17470434,17358012,17258988,17227023	17470634,17358050,17259498,17228747	Gene ID= ENSG00000103489.11 TPM= 3.5 Transcript Type= NA
chr16	17312027	17316889	17312027	17316889	+	transcript2341.chr16.nnic@NA	transcript2341.chr16.nnic	NA	17312027	17316889	Gene ID= novel_gene_chr16_2342 TPM= 3.5 Transcript Type= NA
chr16	18358095	18380765	18358095	18380765	-	transcript2353.chr16.nnic@AC126755.2	transcript2353.chr16.nnic	protein_coding	18379908,18379493,18379155,18377488,18377258,18376953,18376736,18374832,18368258,18364535,18364227,18361170,18360093,18359948,18358095	18380765,18379727,18379350,18377658,18377401,18377163,18376862,18375069,18368386,18364634,18364371,18361277,18360153,18359983,18358588	Gene ID= ENSG00000233024.7 TPM= 8.17 Transcript Type= NA
chr16	18499925	18562112	18499925	18562112	-	ENST00000622306.4@NOMO2	ENST00000622306.4	protein_coding	18561876,18557702,18554807,18551439,18549521,18547228,18543617,18542594,18542172,18538859,18538526,18533005,18531466,18531037,18529501,18527537,18524489,18523844,18520765,18520597,18519501,18519229,18517189,18515883,18514342,18513350,18511546,18509166,18506873,18500991,18499925	18562112,18557791,18554852,18551539,18549627,18547300,18543769,18542731,18542261,18538964,18538676,18533179,18531607,18531168,18529637,18527624,18524552,18523939,18520983,18520679,18519660,18519355,18517302,18516010,18514483,18513433,18511656,18509267,18506992,18501083,18500567	Gene ID= ENSG00000185164.14 TPM= 216.2 Transcript Type= protein_coding
chr16	18499925	18562112	18499925	18562112	-	ENST00000621364.4@NOMO2	ENST00000621364.4	protein_coding	18561876,18557702,18554807,18551439,18549521,18547228,18543617,18542594,18542172,18538859,18538526,18533005,18531466,18531037,18529501,18527537,18524489,18523844,18520765,18520597,18519501,18519229,18517189,18515883,18514342,18513350,18511546,18509166,18506873,18500991,18500440,18499925	18562112,18557791,18554852,18551539,18549627,18547300,18543769,18542731,18542261,18538964,18538676,18533179,18531607,18531168,18529637,18527624,18524552,18523939,18520983,18520679,18519660,18519355,18517302,18516010,18514483,18513433,18511656,18509267,18506992,18501083,18500567,18500108	Gene ID= ENSG00000185164.14 TPM= 6.04 Transcript Type= protein_coding
chr16	18571188	18598328	18571188	18598328	+	ENST00000546162.6@ABCC6P1	ENST00000546162.6	transcribed_unprocessed_pseudogene	18571188,18572877,18574320,18574761,18575026,18580210,18582406,18585806,18591104,18592539,18596767	18571311,18573060,18574435,18574886,18575154,18580335,18582467,18585937,18591307,18592716,18598328	Gene ID= ENSG00000256340.8 TPM= 1.17 Transcript Type= processed_transcript
chr16	18571162	18573522	18571162	18573522	+	ENST00000565118.1@ABCC6P1	ENST00000565118.1	transcribed_unprocessed_pseudogene	18571162,18572877	18571311,18573522	Gene ID= ENSG00000256340.8 TPM= 5.84 Transcript Type= processed_transcript
chr16	18782968	18790362	18782968	18790362	-	ENST00000576008.5@RPS15A	ENST00000576008.5	protein_coding	18790310,18788981,18788063,18786240,18784738,18782968	18790362,18789118,18788142,18786336,18784823,18783102	Gene ID= ENSG00000134419.15 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr16	18781295	18790334	18781295	18790334	-	ENST00000322989.8@RPS15A	ENST00000322989.8	protein_coding	18790244,18788981,18788063,18784738,18781295	18790334,18789118,18788142,18784823,18783102	Gene ID= ENSG00000134419.15 TPM= 47.87 Transcript Type= protein_coding
chr16	18782956	18790383	18782956	18790383	-	ENST00000563390.5@RPS15A	ENST00000563390.5	protein_coding	18790310,18788981,18788063,18784738,18782956	18790383,18789118,18788142,18784823,18783102	Gene ID= ENSG00000134419.15 TPM= 513.74 Transcript Type= protein_coding
chr16	18782962	18790362	18782962	18790362	-	ENST00000574723.5@RPS15A	ENST00000574723.5	protein_coding	18790310,18788981,18784738,18782962	18790362,18789118,18784823,18783102	Gene ID= ENSG00000134419.15 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr16	18782968	18790334	18782968	18790334	-	ENST00000562935.5@RPS15A	ENST00000562935.5	protein_coding	18790310,18788981,18788063,18784738,18782968	18790334,18789118,18788105,18784823,18783102	Gene ID= ENSG00000134419.15 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr16	18791667	18801678	18791667	18801678	-	ENST00000304414.11@ARL6IP1	ENST00000304414.11	protein_coding	18801431,18798701,18797925,18795464,18794599,18791667	18801678,18798834,18798044,18795581,18794683,18793370	Gene ID= ENSG00000170540.14 TPM= 484.55 Transcript Type= protein_coding
chr16	18804853	18926454	18804853	18926454	-	ENST00000446231.6@SMG1	ENST00000446231.6	protein_coding	18925950,18896793,18896052,18892218,18890863,18889372,18885541,18885090,18884070,18882165,18879495,18877131,18876124,18872494,18872184,18871364,18870801,18870610,18869854,18869104,18868523,18868190,18866621,18864002,18863650,18860667,18859556,18859022,18858170,18854656,18853583,18852318,18852067,18850237,18849949,18849217,18847816,18847453,18845429,18842208,18841565,18839698,18838551,18838357,18838014,18837253,18836360,18835933,18834892,18834204,18832940,18830219,18829926,18829286,18828031,18819502,18817291,18816302,18815440,18815175,18811948,18811761,18804853	18926454,18896956,18896207,18892354,18890921,18889585,18885666,18885162,18884167,18882338,18879719,18877232,18876393,18872624,18872345,18871482,18870888,18870711,18869994,18869303,18868719,18868354,18866775,18864144,18863851,18860776,18859703,18859181,18858290,18854904,18853867,18852462,18852205,18850467,18850126,18849378,18848033,18847607,18845651,18842454,18841794,18839946,18838689,18838466,18838232,18837443,18836532,18836212,18835164,18834438,18833166,18830369,18830115,18829755,18828168,18819654,18817470,18816529,18815651,18815281,18812127,18811867,18809646	Gene ID= ENSG00000157106.16 TPM= 7.01 Transcript Type= protein_coding
chr16	18983934	19063181	18983934	19063181	+	ENST00000304381.9@TMC7	ENST00000304381.9	protein_coding	18983934,19009172,19016450,19021629,19023113,19030224,19035676,19037874,19040289,19044884,19045341,19047063,19051686,19056542,19059416,19061778	18984130,19009415,19016598,19021796,19023195,19030369,19035823,19038047,19040446,19045001,19045438,19047249,19051816,19056697,19059494,19063181	Gene ID= ENSG00000170537.12 TPM= 1.17 Transcript Type= protein_coding
chr16	19067599	19080095	19067599	19080095	+	ENST00000321998.9@COQ7	ENST00000321998.9	protein_coding	19067599,19071928,19073921,19075721,19077306,19078081	19067737,19072106,19074035,19075860,19077374,19080095	Gene ID= ENSG00000167186.10 TPM= 4.67 Transcript Type= protein_coding
chr16	19077592	19082608	19077592	19082608	-	transcript2421.chr16.nnic@NA	transcript2421.chr16.nnic	NA	19077592	19082608	Gene ID= novel_gene_chr16_2422 TPM= 8.17 Transcript Type= NA
chr16	19114383	19121629	19114383	19121629	+	ENST00000381440.4@ITPRIPL2	ENST00000381440.4	protein_coding	19114383	19121629	Gene ID= ENSG00000205730.6 TPM= 23.35 Transcript Type= protein_coding
chr16	19168238	19250078	19168238	19250078	+	transcript2426.chr16.nic@SYT17	transcript2426.chr16.nic	protein_coding	19168238,19172760,19173430,19180391,19183528,19223045,19224683,19249941	19168661,19172777,19173578,19180539,19184147,19223165,19224838,19250078	Gene ID= ENSG00000103528.16 TPM= 9.92 Transcript Type= NA
chr16	19168238	19268334	19168238	19268334	+	transcript2432.chr16.nnic@SYT17	transcript2432.chr16.nnic	protein_coding	19168238,19172760,19173444,19180391,19183528,19223045,19224683,19266880	19168661,19172777,19173578,19180539,19184147,19223165,19224838,19268334	Gene ID= ENSG00000103528.16 TPM= 2.34 Transcript Type= NA
chr16	19168249	19268334	19168249	19268334	+	ENST00000355377.6@SYT17	ENST00000355377.6	protein_coding	19168249,19172760,19173430,19180391,19183528,19223045,19224683,19266880	19168661,19172777,19173578,19180539,19184147,19223165,19224838,19268334	Gene ID= ENSG00000103528.16 TPM= 9.34 Transcript Type= protein_coding
chr16	19352291	19353762	19352291	19353762	+	transcript2471.chr16.nnic@NA	transcript2471.chr16.nnic	NA	19352291	19353762	Gene ID= novel_gene_chr16_2472 TPM= 4.67 Transcript Type= NA
chr16	19410503	19498397	19410503	19498397	+	transcript2440.chr16.nic@TMC5	transcript2440.chr16.nic	protein_coding	19410503,19430413,19439960,19444081,19449542,19460235,19463280,19463776,19466082,19469681,19472088,19474125,19477440,19479431,19481370,19486945,19487193,19490395,19492150,19494262,19497121,19497920	19410773,19430640,19440826,19444250,19449631,19460334,19463367,19464024,19466233,19469825,19472243,19474276,19477518,19479528,19481465,19487020,19487326,19490568,19492228,19494366,19497163,19498397	Gene ID= ENSG00000103534.16 TPM= 6.22 Transcript Type= NA
chr16	19410735	19499113	19410735	19499113	+	ENST00000396229.6@TMC5	ENST00000396229.6	protein_coding	19410735,19430413,19439960,19444081,19449542,19460235,19463280,19463776,19466082,19469681,19472088,19474125,19477440,19479431,19481370,19486945,19487193,19490395,19492150,19494262,19497121,19497920	19411176,19430640,19440826,19444250,19449631,19460334,19463367,19464024,19466233,19469825,19472243,19474276,19477518,19479528,19481465,19487020,19487326,19490568,19492228,19494366,19497163,19499113	Gene ID= ENSG00000103534.16 TPM= 7.97 Transcript Type= protein_coding
chr16	19417696	19499113	19417696	19499113	+	ENST00000542583.6@TMC5	ENST00000542583.6	protein_coding	19417696,19430413,19439960,19444081,19449542,19460235,19463280,19463776,19466082,19469681,19472088,19474125,19477440,19479431,19481370,19486945,19487193,19490395,19492150,19494262,19497121,19497920	19418092,19430640,19440826,19444250,19449631,19460334,19463367,19464024,19466233,19469825,19472243,19474276,19477518,19479528,19481465,19487020,19487326,19490568,19492228,19494366,19497163,19499113	Gene ID= ENSG00000103534.16 TPM= 6.81 Transcript Type= protein_coding
chr16	19501689	19522145	19501689	19522145	-	ENST00000353258.7@GDE1	ENST00000353258.7	protein_coding	19521704,19517014,19510839,19507687,19504881,19501689	19522145,19517189,19510944,19507779,19505092,19503617	Gene ID= ENSG00000006007.11 TPM= 18.68 Transcript Type= protein_coding
chr16	19502383	19522123	19502383	19522123	-	ENST00000564172.1@GDE1	ENST00000564172.1	protein_coding	19521704,19517014,19510839,19507687,19504881,19502383	19522123,19517185,19510944,19507779,19505092,19503617	Gene ID= ENSG00000006007.11 TPM= 67.72 Transcript Type= nonsense_mediated_decay
chr16	19523900	19553408	19523900	19553408	+	transcript2486.chr16.nic@CCP110	transcript2486.chr16.nic	protein_coding	19523900,19525719,19527867,19532416,19535940,19540657,19541887,19542621,19542878,19544797,19545094,19545817,19546412,19547955,19548515,19551196	19524088,19525861,19528022,19532544,19537587,19540787,19542064,19542760,19542994,19544898,19545210,19545890,19546474,19548014,19548600,19553408	Gene ID= ENSG00000103540.16 TPM= 5.84 Transcript Type= NA
chr16	19523811	19553408	19523811	19553408	+	ENST00000396212.6@CCP110	ENST00000396212.6	protein_coding	19523811,19525719,19527867,19532416,19535940,19540657,19541887,19542621,19542878,19544797,19545094,19545817,19546412,19547955,19551196	19524088,19525861,19528022,19532544,19537587,19540787,19542064,19542760,19542994,19544898,19545210,19545890,19546474,19548014,19553408	Gene ID= ENSG00000103540.16 TPM= 4.67 Transcript Type= protein_coding
chr16	19523940	19553408	19523940	19553408	+	transcript2490.chr16.nic@CCP110	transcript2490.chr16.nic	protein_coding	19523940,19527867,19532416,19535940,19540657,19541887,19542621,19542878,19544797,19545094,19545817,19546412,19547955,19551196	19524088,19528022,19532544,19537587,19540787,19542064,19542760,19542994,19544898,19545210,19545890,19546474,19548014,19553408	Gene ID= ENSG00000103540.16 TPM= 6.42 Transcript Type= NA
chr16	19523857	19553408	19523857	19553408	+	ENST00000381396.9@CCP110	ENST00000381396.9	protein_coding	19523857,19527867,19532416,19535940,19540657,19541887,19542621,19542878,19544797,19545094,19545817,19546412,19547955,19548515,19551196	19524088,19528022,19532544,19537587,19540787,19542064,19542760,19542994,19544898,19545210,19545890,19546474,19548014,19548600,19553408	Gene ID= ENSG00000103540.16 TPM= 8.76 Transcript Type= protein_coding
chr16	19555712	19700687	19555712	19700687	+	transcript2499.chr16.nic@C16orf62	transcript2499.chr16.nic	protein_coding	19555712,19564851,19569424,19573119,19575098,19579052,19581525,19591790,19601664,19608178,19608974,19610322,19626177,19627694,19628637,19629767,19633092,19637594,19640015,19642396,19644886,19647784,19650382,19651976,19669160,19682225,19691353,19699502,19700378	19555746,19564950,19569591,19573241,19575122,19579128,19581653,19591874,19601723,19608274,19609021,19610415,19626223,19627805,19628753,19629820,19633172,19637656,19640100,19642476,19644949,19647882,19650459,19652090,19669299,19682390,19691471,19699648,19700687	Gene ID= ENSG00000103544.14 TPM= 7.01 Transcript Type= NA
chr16	19555720	19700689	19555720	19700689	+	ENST00000417362.6@C16orf62	ENST00000417362.6	protein_coding	19555720,19564851,19569424,19573119,19575098,19579052,19581525,19591790,19601664,19608178,19608974,19610322,19616114,19616686,19626177,19627694,19628637,19629767,19633092,19637594,19640015,19642396,19644886,19647784,19650382,19651976,19669160,19682225,19691353,19699502,19700378	19555746,19564950,19569591,19573241,19575122,19579128,19581653,19591874,19601723,19608274,19609021,19610415,19616191,19616808,19626223,19627805,19628753,19629820,19633172,19637656,19640100,19642476,19644949,19647882,19650459,19652090,19669299,19682390,19691471,19699648,19700689	Gene ID= ENSG00000103544.14 TPM= 65.39 Transcript Type= protein_coding
chr16	19701934	19718234	19701934	19718234	-	ENST00000219837.11@KNOP1	ENST00000219837.11	protein_coding	19718158,19714118,19711372,19710509,19701934	19718234,19715037,19711440,19710586,19707221	Gene ID= ENSG00000103550.13 TPM= 9.34 Transcript Type= protein_coding
chr16	19706356	19718227	19706356	19718227	-	transcript2508.chr16.nic@KNOP1	transcript2508.chr16.nic	protein_coding	19718158,19714118,19710509,19706356	19718227,19715037,19710586,19707221	Gene ID= ENSG00000103550.13 TPM= 5.84 Transcript Type= NA
chr16	19716456	19858467	19716456	19858467	+	ENST00000320394.10@IQCK	ENST00000320394.10	protein_coding	19716456,19717695,19730430,19733698,19735353,19763848,19764035,19788838,19827026,19856487	19716542,19718487,19730494,19733827,19735450,19763900,19764112,19788922,19827137,19858467	Gene ID= ENSG00000174628.16 TPM= 4.67 Transcript Type= protein_coding
chr16	19856691	19884917	19856691	19884917	-	ENST00000300571.6@GPRC5B	ENST00000300571.6	protein_coding	19884727,19871816,19861837,19856691	19884917,19872846,19861973,19860544	Gene ID= ENSG00000167191.11 TPM= 9.34 Transcript Type= protein_coding
chr16	19868103	19870070	19868103	19870070	+	transcript2520.chr16.nnic@NA	transcript2520.chr16.nnic	NA	19868103	19870070	Gene ID= novel_gene_chr16_2521 TPM= 2.34 Transcript Type= NA
chr16	20409534	20441336	20409534	20441336	+	ENST00000331849.8@ACSM5	ENST00000331849.8	protein_coding	20409534,20411470,20418059,20419228,20421258,20423916,20427788,20429678,20430993,20431220,20437052,20437268,20439800,20440344	20409665,20411688,20418269,20419435,20421401,20424069,20427867,20429801,20431073,20431321,20437179,20437367,20439919,20441336	Gene ID= ENSG00000183549.10 TPM= 5.84 Transcript Type= protein_coding
chr16	20409534	20419795	20409534	20419795	+	ENST00000575584.5@ACSM5	ENST00000575584.5	protein_coding	20409534,20411470,20418059,20419228	20409665,20411688,20418269,20419795	Gene ID= ENSG00000183549.10 TPM= 1.17 Transcript Type= protein_coding
chr16	20674531	20682176	20674531	20682176	+	ENST00000614721.1@ACSM3	ENST00000614721.1	protein_coding	20674531,20679158	20674822,20682176	Gene ID= ENSG00000005187.11 TPM= 1.17 Transcript Type= processed_transcript
chr16	20733664	20742084	20733664	20742084	-	ENST00000381337.6@THUMPD1	ENST00000381337.6	protein_coding	20741509,20738897,20737708,20736860,20733664	20742084,20739071,20737956,20737286,20736358	Gene ID= ENSG00000066654.13 TPM= 11.68 Transcript Type= protein_coding
chr16	20735375	20741811	20735375	20741811	-	transcript2541.chr16.nic@THUMPD1	transcript2541.chr16.nic	protein_coding	20741509,20737708,20735375	20741811,20739071,20737286	Gene ID= ENSG00000066654.13 TPM= 2.34 Transcript Type= NA
chr16	20735375	20741796	20735375	20741796	-	ENST00000396083.6@THUMPD1	ENST00000396083.6	protein_coding	20741509,20738897,20737708,20735375	20741796,20739071,20737956,20737286	Gene ID= ENSG00000066654.13 TPM= 4.67 Transcript Type= protein_coding
chr16	20763706	20797156	20763706	20797156	+	transcript2542.chr16.nic@ACSM3	transcript2542.chr16.nic	protein_coding	20763706,20769984,20775839,20777373,20779797,20780714,20780974,20781708,20784984,20786078,20790587,20792002,20792236,20796370,20796886	20764125,20770253,20776049,20777580,20779907,20780857,20781130,20781787,20785107,20786158,20790688,20792129,20792335,20796489,20797156	Gene ID= ENSG00000005187.11 TPM= 4.67 Transcript Type= NA
chr16	20763702	20797581	20763702	20797581	+	ENST00000289416.9@ACSM3	ENST00000289416.9	protein_coding	20763702,20769984,20775839,20777373,20780714,20780974,20781708,20784984,20786078,20790587,20792002,20792236,20796370,20796886	20764125,20770253,20776049,20777580,20780857,20781130,20781787,20785107,20786158,20790688,20792129,20792335,20796489,20797581	Gene ID= ENSG00000005187.11 TPM= 5.84 Transcript Type= protein_coding
chr16	20764040	20786314	20764040	20786314	+	ENST00000440284.6@ACSM3	ENST00000440284.6	protein_coding	20764040,20769984,20775839,20777373,20780714,20780974,20781708,20784984,20786078	20764125,20770253,20776049,20777580,20780857,20781130,20781787,20785107,20786314	Gene ID= ENSG00000005187.11 TPM= 2.34 Transcript Type= protein_coding
chr16	20796344	20806472	20796344	20806472	-	transcript2548.chr16.nic@ERI2	transcript2548.chr16.nic	protein_coding	20806408,20805715,20803603,20803433,20802796,20801203,20800302,20799957,20799263,20796344	20806472,20805945,20803670,20803516,20802923,20801359,20800402,20800038,20799351,20798211	Gene ID= ENSG00000196678.13 TPM= 2.34 Transcript Type= NA
chr16	20796344	20806457	20796344	20806457	-	transcript2552.chr16.nic@ERI2	transcript2552.chr16.nic	protein_coding	20805715,20803603,20803433,20802796,20801203,20800302,20799957,20799263,20796344	20806457,20803670,20803516,20802923,20801359,20800402,20800038,20799351,20798211	Gene ID= ENSG00000196678.13 TPM= 3.5 Transcript Type= NA
chr16	20796344	20806476	20796344	20806476	-	ENST00000569729.5@ERI2	ENST00000569729.5	protein_coding	20806408,20803603,20803433,20802796,20801203,20800302,20799957,20799263,20796344	20806476,20803670,20803516,20802923,20801359,20800402,20800038,20799351,20798211	Gene ID= ENSG00000196678.13 TPM= 2.34 Transcript Type= protein_coding
chr16	20796344	20806473	20796344	20806473	-	ENST00000357967.8@ERI2	ENST00000357967.8	protein_coding	20806408,20803603,20803433,20802796,20801203,20800302,20799957,20799263,20796344	20806473,20803670,20803516,20802923,20801359,20800402,20800038,20799351,20799067	Gene ID= ENSG00000196678.13 TPM= 2.34 Transcript Type= protein_coding
chr16	20900753	20925004	20900753	20925004	+	ENST00000219168.8@LYRM1	ENST00000219168.8	protein_coding	20900753,20902486,20915556,20920122,20924000	20900889,20902717,20915714,20920214,20925004	Gene ID= ENSG00000102897.9 TPM= 2.72 Transcript Type= protein_coding
chr16	20900235	20925004	20900235	20925004	+	ENST00000412082.6@LYRM1	ENST00000412082.6	protein_coding	20900235,20920122,20924000	20900535,20920214,20925004	Gene ID= ENSG00000102897.9 TPM= 1.55 Transcript Type= protein_coding
chr16	20900812	20925004	20900812	20925004	+	transcript2571.chr16.nnic@LYRM1	transcript2571.chr16.nnic	protein_coding	20900812,20920122,20924000	20900889,20920214,20925004	Gene ID= ENSG00000102897.9 TPM= 2.72 Transcript Type= NA
chr16	21158667	21180616	21158667	21180616	+	transcript2576.chr16.nic@TMEM159	transcript2576.chr16.nic	protein_coding	21158667,21160978,21166840,21170437,21174010,21179475	21158746,21161278,21166911,21170605,21174148,21180616	Gene ID= ENSG00000011638.10 TPM= 3.5 Transcript Type= NA
chr16	21158679	21180609	21158679	21180609	+	ENST00000261388.7@TMEM159	ENST00000261388.7	protein_coding	21158679,21160978,21170437,21174010,21179475	21158746,21161278,21170605,21174148,21180609	Gene ID= ENSG00000011638.10 TPM= 31.53 Transcript Type= protein_coding
chr16	21258521	21278329	21258521	21278329	-	transcript2584.chr16.nic@CRYM	transcript2584.chr16.nic	protein_coding	21278082,21277431,21275532,21269790,21267554,21262037,21261254,21258521	21278329,21277584,21275594,21269891,21267737,21262158,21261338,21258845	Gene ID= ENSG00000103316.10 TPM= 7.01 Transcript Type= NA
chr16	21463537	21520455	21463537	21520455	-	transcript2590.chr16.nic@SMG1P3	transcript2590.chr16.nic	transcribed_unprocessed_pseudogene	21519828,21487578,21484372,21479442,21478091,21476599,21473124,21472673,21471654,21469747,21467092,21464716,21463537	21520455,21487616,21484535,21479578,21478146,21476812,21473249,21472745,21471751,21469919,21467316,21464817,21463993	Gene ID= ENSG00000180747.15 TPM= 5.84 Transcript Type= NA
chr16	21502651	21504901	21502651	21504901	+	transcript2597.chr16.nnic@NA	transcript2597.chr16.nnic	NA	21502651	21504901	Gene ID= novel_gene_chr16_2598 TPM= 3.5 Transcript Type= NA
chr16	21599498	21627567	21599498	21627567	+	transcript2604.chr16.nnic@METTL9	transcript2604.chr16.nnic	protein_coding	21599498,21612645,21617865,21624931,21626947	21599898,21612835,21618074,21625115,21627567	Gene ID= ENSG00000197006.13 TPM= 3.5 Transcript Type= NA
chr16	21599476	21657473	21599476	21657473	+	ENST00000358154.7@METTL9	ENST00000358154.7	protein_coding	21599476,21612645,21617865,21624931,21655227	21599898,21612835,21618074,21625115,21657473	Gene ID= ENSG00000197006.13 TPM= 147.7 Transcript Type= protein_coding
chr16	21639537	21652660	21639537	21652660	-	ENST00000268389.5@IGSF6	ENST00000268389.5	protein_coding	21652532,21647133,21644290,21643548,21643074,21639537	21652660,21647492,21644396,21643598,21643154,21641593	Gene ID= ENSG00000140749.8 TPM= 9.34 Transcript Type= protein_coding
chr16	21756723	21760726	21756723	21760726	+	transcript2617.chr16.nic@OTOA	transcript2617.chr16.nic	protein_coding	21756723,21760470	21757277,21760726	Gene ID= ENSG00000155719.16 TPM= 3.5 Transcript Type= NA
chr16	21950219	21953039	21950219	21953039	-	transcript2635.chr16.nnic@NA	transcript2635.chr16.nnic	NA	21950219	21953039	Gene ID= novel_gene_chr16_2636 TPM= 2.34 Transcript Type= NA
chr16	21952660	21983660	21952660	21983660	+	ENST00000268379.8@UQCRC2	ENST00000268379.8	protein_coding	21952660,21957235,21957417,21958535,21962460,21962761,21965408,21968628,21971525,21971923,21973896,21976167,21980547,21983088	21953456,21957318,21957566,21958599,21962516,21962885,21965505,21968685,21971620,21972122,21973976,21976243,21980700,21983660	Gene ID= ENSG00000140740.10 TPM= 47.87 Transcript Type= protein_coding
chr16	22229066	22233538	22229066	22233538	+	transcript2657.chr16.nnic@EEF2K	transcript2657.chr16.nnic	protein_coding	22229066,22230425,22231947	22229486,22231114,22233538	Gene ID= ENSG00000103319.11 TPM= 2.34 Transcript Type= NA
chr16	22206282	22288732	22206282	22288732	+	ENST00000263026.9@EEF2K	ENST00000263026.9	protein_coding	22206282,22225654,22244630,22248755,22250654,22251151,22256748,22257253,22257643,22258494,22260462,22263110,22264818,22266390,22266688,22273626,22280198,22283887	22206679,22225975,22244730,22248815,22250691,22251322,22256897,22257385,22257770,22258695,22260529,22263187,22264880,22266524,22266876,22273750,22280376,22288732	Gene ID= ENSG00000103319.11 TPM= 12.84 Transcript Type= protein_coding
chr16	22297402	22334203	22297402	22334203	+	transcript2663.chr16.nnic@POLR3E	transcript2663.chr16.nnic	protein_coding	22297402,22302958,22305156,22308148,22308925,22309428,22313620,22314079,22315089,22316601,22316995,22317115,22318826,22322850,22324354,22324503,22325205,22325761,22328510,22332060,22333644	22297425,22303004,22305206,22308225,22309040,22309510,22313727,22314128,22315208,22316686,22317039,22317206,22318946,22322931,22324413,22324660,22325266,22326278,22328587,22332185,22334203	Gene ID= ENSG00000058600.15 TPM= 3.5 Transcript Type= NA
chr16	22345936	22437570	22345936	22437570	-	transcript2679.chr16.nnic@CDR2	transcript2679.chr16.nnic	protein_coding	22437005,22435682,22434627,22432726,22429796,22426213,22364902,22349701,22349279,22345936	22437570,22435812,22434811,22432834,22429948,22426366,22365014,22349849,22349443,22347823	Gene ID= ENSG00000140743.7 TPM= 7.01 Transcript Type= NA
chr16	22345936	22437372	22345936	22437372	-	transcript2681.chr16.nic@CDR2	transcript2681.chr16.nic	protein_coding	22437005,22435682,22434627,22432726,22429796,22364902,22349701,22349279,22345936	22437372,22435812,22434811,22432834,22429948,22365014,22349849,22349443,22347823	Gene ID= ENSG00000140743.7 TPM= 7.01 Transcript Type= NA
chr16	22345936	22374617	22345936	22374617	-	ENST00000268383.6@CDR2	ENST00000268383.6	protein_coding	22374231,22364902,22349701,22349279,22345936	22374617,22365014,22349849,22349443,22347823	Gene ID= ENSG00000140743.7 TPM= 71.22 Transcript Type= protein_coding
chr16	22398098	22401264	22398098	22401264	-	transcript2701.chr16.nnic@NA	transcript2701.chr16.nnic	NA	22398098	22401264	Gene ID= novel_gene_chr16_2702 TPM= 2.34 Transcript Type= NA
chr16	22408289	22411043	22408289	22411043	-	transcript2699.chr16.nnic@NA	transcript2699.chr16.nnic	NA	22408289	22411043	Gene ID= novel_gene_chr16_2700 TPM= 2.34 Transcript Type= NA
chr16	22419515	22437870	22419515	22437870	-	transcript2689.chr16.nnic@RRN3P3	transcript2689.chr16.nnic	transcribed_unprocessed_pseudogene	22437005,22435682,22434627,22432726,22429796,22419515	22437870,22435812,22434811,22432834,22429948,22420594	Gene ID= ENSG00000257122.5 TPM= 3.5 Transcript Type= NA
chr16	22424054	22437364	22424054	22437364	-	transcript2693.chr16.nic@RRN3P3	transcript2693.chr16.nic	transcribed_unprocessed_pseudogene	22437005,22435682,22434627,22432726,22429796,22424054	22437364,22435812,22434811,22432834,22429948,22426366	Gene ID= ENSG00000257122.5 TPM= 2.34 Transcript Type= NA
chr16	22572836	22576865	22572836	22576865	+	transcript2703.chr16.nic@AC106788.1	transcript2703.chr16.nic	transcribed_unprocessed_pseudogene	22572836,22576612	22573417,22576865	Gene ID= ENSG00000257838.5 TPM= 5.84 Transcript Type= NA
chr16	22814162	22916330	22814162	22916330	+	transcript2714.chr16.nnic@HS3ST2	transcript2714.chr16.nnic	protein_coding	22814162,22833276,22914944	22815095,22833448,22916330	Gene ID= ENSG00000122254.6 TPM= 4.67 Transcript Type= NA
chr16	22814162	22916319	22814162	22916319	+	transcript2715.chr16.nnic@HS3ST2	transcript2715.chr16.nnic	protein_coding	22814162,22854664,22914944	22815095,22854781,22916319	Gene ID= ENSG00000122254.6 TPM= 18.68 Transcript Type= NA
chr16	22814177	22916338	22814177	22916338	+	ENST00000261374.3@HS3ST2	ENST00000261374.3	protein_coding	22814177,22914944	22815095,22916338	Gene ID= ENSG00000122254.6 TPM= 10.51 Transcript Type= protein_coding
chr16	23067979	23149450	23067979	23149450	-	transcript2718.chr16.nnic@USP31	transcript2718.chr16.nnic	protein_coding	23148638,23108046,23107331,23106399,23106213,23105441,23102319,23090624,23087724,23087092,23085585,23084860,23082438,23079946,23073722,23072045,23067979	23149450,23108183,23107414,23106487,23106305,23105576,23102463,23090804,23087835,23087186,23085662,23084989,23082557,23080171,23073880,23072197,23069616	Gene ID= ENSG00000103404.14 TPM= 4.67 Transcript Type= NA
chr16	23078979	23149450	23078979	23149450	-	transcript2722.chr16.nic@USP31	transcript2722.chr16.nic	protein_coding	23148638,23108046,23106399,23106213,23105441,23102319,23090624,23087724,23087092,23085585,23084860,23082438,23078979	23149450,23108183,23106487,23106305,23105576,23102463,23090804,23087835,23087186,23085662,23084989,23082557,23080171	Gene ID= ENSG00000103404.14 TPM= 3.5 Transcript Type= NA
chr16	23182715	23216883	23182715	23216883	+	ENST00000300061.2@SCNN1G	ENST00000300061.2	protein_coding	23182715,23186228,23189371,23192352,23194171,23197264,23209750,23212034,23212678,23212837,23213102,23214712,23215089	23182813,23186588,23189671,23192542,23194274,23197427,23209848,23212151,23212756,23212894,23213163,23214787,23216883	Gene ID= ENSG00000166828.2 TPM= 25.69 Transcript Type= protein_coding
chr16	23302301	23381299	23302301	23381299	+	transcript2731.chr16.nnic@SCNN1B	transcript2731.chr16.nnic	protein_coding	23302301,23323554,23348592,23352801,23355299,23367856,23371299,23371776,23375738,23377165,23377329,23378706,23380094,23380421	23302437,23323578,23348910,23353074,23355489,23367959,23371462,23371883,23375855,23377240,23377386,23378767,23380169,23381299	Gene ID= ENSG00000168447.10 TPM= 20.43 Transcript Type= NA
chr16	23302270	23381299	23302270	23381299	+	ENST00000343070.6@SCNN1B	ENST00000343070.6	protein_coding	23302270,23348592,23352801,23355299,23367856,23371299,23371776,23375738,23377165,23377329,23378706,23380094,23380421	23302437,23348910,23353074,23355489,23367959,23371462,23371883,23375855,23377240,23377386,23378767,23380169,23381299	Gene ID= ENSG00000168447.10 TPM= 85.82 Transcript Type= protein_coding
chr16	23420911	23453205	23420911	23453205	-	transcript2747.chr16.nic@COG7	transcript2747.chr16.nic	protein_coding	23452826,23445813,23445048,23442477,23434636,23433545,23420911	23453205,23445961,23445164,23442645,23434718,23433667,23424947	Gene ID= ENSG00000168434.12 TPM= 8.17 Transcript Type= NA
chr16	23388493	23453156	23388493	23453156	-	transcript2748.chr16.nnic@COG7	transcript2748.chr16.nnic	protein_coding	23451244,23440086,23388493	23453156,23440108,23390233	Gene ID= ENSG00000168434.12 TPM= 3.5 Transcript Type= NA
chr16	23388493	23453180	23388493	23453180	-	ENST00000307149.9@COG7	ENST00000307149.9	protein_coding	23452826,23445813,23445048,23442477,23434636,23433545,23424749,23418700,23416967,23413448,23410295,23406076,23403694,23398046,23393233,23392380,23388493	23453180,23445961,23445164,23442645,23434718,23433667,23424947,23418827,23417121,23413564,23410360,23406262,23403834,23398129,23393347,23392523,23389086	Gene ID= ENSG00000168434.12 TPM= 14.01 Transcript Type= protein_coding
chr16	23453007	23455789	23453007	23455789	+	ENST00000565747.5@AC008915.2	ENST00000565747.5	lincRNA	23453007,23455470	23453265,23455789	Gene ID= ENSG00000260136.5 TPM= 1.17 Transcript Type= lincRNA
chr16	23453007	23457606	23453007	23457606	+	ENST00000562842.1@AC008915.2	ENST00000562842.1	lincRNA	23453007,23457428	23453265,23457606	Gene ID= ENSG00000260136.5 TPM= 1.17 Transcript Type= lincRNA
chr16	23463542	23510494	23463542	23510494	-	ENST00000309859.8@GGA2	ENST00000309859.8	protein_coding	23510321,23495694,23494303,23493360,23491677,23488606,23486710,23486015,23482923,23480645,23479765,23478883,23478368,23474904,23469996,23468886,23463542	23510494,23495778,23494378,23493458,23491800,23488709,23486790,23486152,23483004,23480770,23479887,23478911,23478501,23475061,23470165,23468996,23467700	Gene ID= ENSG00000103365.15 TPM= 6.56 Transcript Type= protein_coding
chr16	23466165	23494439	23466165	23494439	-	transcript2776.chr16.nic@GGA2	transcript2776.chr16.nic	protein_coding	23494303,23493360,23491677,23488606,23486710,23486015,23482923,23480645,23479765,23478883,23478368,23474904,23469996,23468886,23466165	23494439,23493458,23491800,23488709,23486790,23486152,23483004,23480770,23479887,23478911,23478501,23475061,23470165,23468996,23467700	Gene ID= ENSG00000103365.15 TPM= 14.15 Transcript Type= NA
chr16	23502393	23504095	23502393	23504095	+	transcript2783.chr16.nnic@NA	transcript2783.chr16.nnic	NA	23502393	23504095	Gene ID= novel_gene_chr16_2784 TPM= 2.34 Transcript Type= NA
chr16	23522014	23557375	23522014	23557375	-	ENST00000449606.5@EARS2	ENST00000449606.5	protein_coding	23557205,23552149,23544514,23534888,23532657,23529744,23529502,23525244,23522014	23557375,23552304,23544703,23535360,23532765,23529897,23529632,23525379,23524454	Gene ID= ENSG00000103356.15 TPM= 12.84 Transcript Type= protein_coding
chr16	23523047	23523645	23523047	23523645	-	ENST00000564759.1@EARS2	ENST00000564759.1	protein_coding	23523047	23523645	Gene ID= ENSG00000103356.15 TPM= 1.17 Transcript Type= processed_transcript
chr16	23557362	23574389	23557362	23574389	+	ENST00000395878.7@UBFD1	ENST00000395878.7	protein_coding	23557362,23557950,23559468,23562206,23562625,23566987,23570480	23557767,23558279,23559676,23562271,23562730,23567069,23574389	Gene ID= ENSG00000103353.15 TPM= 24.52 Transcript Type= protein_coding
chr16	23581002	23596356	23581002	23596356	-	ENST00000007516.7@NDUFAB1	ENST00000007516.7	protein_coding	23596123,23587197,23585336,23582276,23581002	23596356,23587319,23585423,23582375,23581173	Gene ID= ENSG00000004779.9 TPM= 64.22 Transcript Type= protein_coding
chr16	23603170	23641310	23603170	23641310	-	ENST00000261584.8@PALB2	ENST00000261584.8	protein_coding	23641110,23638070,23637850,23634862,23629640,23629204,23626236,23624009,23622969,23621362,23614004,23607864,23603170	23641310,23638129,23637952,23636334,23630469,23629275,23626397,23624094,23623130,23621478,23614091,23608012,23603669	Gene ID= ENSG00000083093.9 TPM= 14.01 Transcript Type= protein_coding
chr16	23603160	23641311	23603160	23641311	-	transcript2804.chr16.nic@PALB2	transcript2804.chr16.nic	protein_coding	23641110,23638070,23637850,23634862,23629640,23629204,23626236,23624009,23622969,23621362,23614004,23603160	23641311,23638129,23637952,23636334,23630469,23629275,23626397,23624094,23623130,23621478,23614091,23603669	Gene ID= ENSG00000083093.9 TPM= 2.34 Transcript Type= NA
chr16	23666468	23669872	23666468	23669872	+	ENST00000563614.1@DCTN5	ENST00000563614.1	protein_coding	23666468	23669872	Gene ID= ENSG00000166847.9 TPM= 3.5 Transcript Type= retained_intron
chr16	23645139	23645552	23645139	23645552	-	transcript2815.chr16.nnic@NA	transcript2815.chr16.nnic	NA	23645139	23645552	Gene ID= novel_gene_chr16_2816 TPM= 2.34 Transcript Type= NA
chr16	23678822	23690367	23678822	23690367	+	ENST00000300093.8@PLK1	ENST00000300093.8	protein_coding	23678822,23680084,23680914,23682064,23683870,23687469,23688668,23689238,23689494,23689860	23679340,23680252,23681058,23682157,23684089,23687624,23688745,23689392,23689676,23690367	Gene ID= ENSG00000166851.14 TPM= 3.5 Transcript Type= protein_coding
chr16	23835954	24215667	23835954	24215667	+	transcript2822.chr16.nnic@PRKCB	transcript2822.chr16.nnic	protein_coding	23835954,23988508,24032136,24035419,24092791,24094163,24112973,24123835,24154684,24172270,24174518,24180790,24185111,24185460,24191090,24214658	23836348,23988590,24032247,24035547,24092947,24094297,24113069,24123981,24154857,24172361,24174580,24180928,24185191,24185567,24191230,24215667	Gene ID= ENSG00000166501.12 TPM= 8.17 Transcript Type= NA
chr16	23839281	23843186	23839281	23843186	-	transcript2825.chr16.nnic@NA	transcript2825.chr16.nnic	NA	23839281	23843186	Gene ID= novel_gene_chr16_2826 TPM= 3.5 Transcript Type= NA
chr16	24539552	24559805	24539552	24559805	+	transcript2829.chr16.nic@RBBP6	transcript2829.chr16.nic	protein_coding	24539552,24546163,24548945,24553513,24555615,24555821,24556308,24559505	24540792,24546262,24548981,24553557,24555703,24555917,24556447,24559805	Gene ID= ENSG00000122257.18 TPM= 4.09 Transcript Type= NA
chr16	24539552	24554936	24539552	24554936	+	transcript2832.chr16.nic@RBBP6	transcript2832.chr16.nic	protein_coding	24539552,24546163,24548945,24553513	24540792,24546262,24548981,24554936	Gene ID= ENSG00000122257.18 TPM= 6.42 Transcript Type= NA
chr16	24550723	24555811	24550723	24555811	+	transcript2839.chr16.nic@RBBP6	transcript2839.chr16.nic	protein_coding	24550723,24555615	24553557,24555811	Gene ID= ENSG00000122257.18 TPM= 3.5 Transcript Type= NA
chr16	24540195	24572863	24540195	24572863	+	ENST00000319715.8@RBBP6	ENST00000319715.8	protein_coding	24540195,24546163,24548945,24553513,24555615,24555821,24556308,24559505,24561612,24561824,24563199,24563423,24563610,24564797,24567143,24567792,24568745,24570876	24540792,24546262,24548981,24553557,24555703,24555917,24556447,24559677,24561715,24562161,24563295,24563501,24563664,24564865,24567505,24567893,24570499,24572863	Gene ID= ENSG00000122257.18 TPM= 12.84 Transcript Type= protein_coding
chr16	24729665	24750777	24729665	24750777	+	transcript2847.chr16.nic@TNRC6A	transcript2847.chr16.nic	protein_coding	24729665,24730253,24750726	24729846,24730300,24750777	Gene ID= ENSG00000090905.18 TPM= 4.67 Transcript Type= NA
chr16	24729713	24734182	24729713	24734182	+	transcript2849.chr16.nnic@NA	transcript2849.chr16.nnic	NA	24729713	24734182	Gene ID= novel_gene_chr16_2850 TPM= 3.5 Transcript Type= NA
chr16	24972938	25015370	24972938	25015370	-	transcript2853.chr16.nic@ARHGAP17	transcript2853.chr16.nic	protein_coding	25015209,24978966,24972938	25015370,24979005,24977319	Gene ID= ENSG00000140750.16 TPM= 2.34 Transcript Type= NA
chr16	24919385	25015331	24919385	25015331	-	ENST00000289968.10@ARHGAP17	ENST00000289968.10	protein_coding	25015209,24978966,24977215,24970507,24968661,24968351,24964197,24959911,24959671,24954603,24952931,24952289,24949404,24947482,24943771,24941987,24939364,24935470,24930784,24919385	25015331,24979005,24977319,24970580,24968772,24968427,24964308,24959979,24959752,24954730,24953042,24952370,24949484,24947595,24943862,24942143,24939597,24935639,24931404,24920260	Gene ID= ENSG00000140750.16 TPM= 5.84 Transcript Type= protein_coding
chr16	25106569	25107102	25106569	25107102	-	ENST00000613406.1@AC133552.6	ENST00000613406.1	sense_intronic	25106569	25107102	Gene ID= ENSG00000275494.1 TPM= 2.34 Transcript Type= sense_intronic
chr16	25111711	25178228	25111711	25178228	+	transcript2857.chr16.nnic@LCMT1	transcript2857.chr16.nnic	protein_coding	25111711,25125964,25128475,25132402,25140171,25151554,25161102,25164598,25169112,25170714,25174937,25178001	25111996,25126130,25128566,25132523,25140247,25151615,25161204,25164718,25169213,25170805,25175034,25178228	Gene ID= ENSG00000205629.11 TPM= 3.79 Transcript Type= NA
chr16	25111739	25178228	25111739	25178228	+	transcript2859.chr16.nic@LCMT1	transcript2859.chr16.nic	protein_coding	25111739,25128475,25132402,25140171,25151554,25161102,25164598,25169112,25170714,25174937,25178001	25111768,25128566,25132523,25140247,25151615,25161204,25164718,25169213,25170805,25175034,25178228	Gene ID= ENSG00000205629.11 TPM= 3.79 Transcript Type= NA
chr16	25111731	25178231	25111731	25178231	+	ENST00000380962.9@LCMT1	ENST00000380962.9	protein_coding	25111731,25125964,25128475,25132402,25140171,25151554,25161102,25164598,25169112,25170714,25174937,25178001	25111996,25126126,25128566,25132523,25140247,25151615,25161204,25164718,25169213,25170805,25175034,25178231	Gene ID= ENSG00000205629.11 TPM= 18.97 Transcript Type= nonsense_mediated_decay
chr16	25111729	25178231	25111729	25178231	+	ENST00000399069.7@LCMT1	ENST00000399069.7	protein_coding	25111729,25128475,25132402,25140171,25151554,25161102,25164598,25169112,25170714,25174937,25178001	25111996,25128566,25132523,25140247,25151615,25161204,25164718,25169213,25170805,25175034,25178231	Gene ID= ENSG00000205629.11 TPM= 37.65 Transcript Type= protein_coding
chr16	25111735	25178198	25111735	25178198	+	ENST00000564011.5@LCMT1	ENST00000564011.5	protein_coding	25111735,25128475,25132402,25140171,25164598,25169112,25170714,25174937,25178001	25111996,25128570,25132523,25140247,25164718,25169213,25170805,25175034,25178198	Gene ID= ENSG00000205629.11 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr16	25236001	25257931	25236001	25257931	-	ENST00000328086.11@ZKSCAN2	ENST00000328086.11	protein_coding	25256729,25255206,25252946,25251909,25246707,25243785,25236001	25257931,25255392,25253037,25252035,25247390,25244276,25240738	Gene ID= ENSG00000155592.15 TPM= 7.01 Transcript Type= protein_coding
chr16	27203495	27221768	27203495	27221768	+	ENST00000286096.8@KDM8	ENST00000286096.8	protein_coding	27203495,27210093,27213585,27214876,27215945,27218961,27220393,27220566	27203636,27210621,27213751,27215008,27215989,27219110,27220485,27221768	Gene ID= ENSG00000155666.11 TPM= 7.01 Transcript Type= protein_coding
chr16	27224995	27268732	27224995	27268732	-	transcript2873.chr16.nic@NSMCE1	transcript2873.chr16.nic	protein_coding	27268706,27268163,27257435,27235178,27234188,27233001,27226720,27225726,27224995	27268732,27268374,27257581,27235299,27234265,27233147,27226836,27225846,27225236	Gene ID= ENSG00000169189.16 TPM= 2.92 Transcript Type= NA
chr16	27224991	27268794	27224991	27268794	-	ENST00000361439.8@NSMCE1	ENST00000361439.8	protein_coding	27268706,27257435,27235178,27234188,27233001,27226720,27225726,27224991	27268794,27257581,27235299,27234265,27233147,27226836,27225846,27225236	Gene ID= ENSG00000169189.16 TPM= 25.1 Transcript Type= protein_coding
chr16	27224998	27268794	27224998	27268794	-	transcript2876.chr16.nic@NSMCE1	transcript2876.chr16.nic	protein_coding	27268706,27257435,27235178,27234188,27233001,27226720,27224998	27268794,27257581,27235299,27234265,27233147,27226836,27225236	Gene ID= ENSG00000169189.16 TPM= 3.5 Transcript Type= NA
chr16	27224995	27235445	27224995	27235445	-	transcript2877.chr16.nic@NSMCE1	transcript2877.chr16.nic	protein_coding	27235178,27234188,27233001,27226720,27225726,27224995	27235445,27234265,27233147,27226836,27225846,27225236	Gene ID= ENSG00000169189.16 TPM= 2.34 Transcript Type= NA
chr16	27313581	27364778	27313581	27364778	+	transcript2884.chr16.nnic@IL4R	transcript2884.chr16.nnic	protein_coding	27313581,27330066,27340186,27342121,27344869,27346467,27352540,27355808,27358916,27360766,27362252	27313817,27330198,27340273,27342259,27345020,27346618,27352696,27355907,27358994,27360815,27364778	Gene ID= ENSG00000077238.13 TPM= 18.09 Transcript Type= NA
chr16	27313502	27364778	27313502	27364778	+	transcript2888.chr16.nic@IL4R	transcript2888.chr16.nic	protein_coding	27313502,27340186,27342121,27344869,27346467,27352540,27355808,27358916,27360766,27362252	27313817,27340273,27342259,27345020,27346618,27352696,27355907,27358994,27360815,27364778	Gene ID= ENSG00000077238.13 TPM= 16.92 Transcript Type= NA
chr16	27313905	27364778	27313905	27364778	+	transcript2889.chr16.nnic@IL4R	transcript2889.chr16.nnic	protein_coding	27313905,27330066,27340186,27342121,27344869,27346467,27355808,27358916,27360766,27362252	27314020,27330198,27340273,27342259,27345020,27346618,27355907,27358994,27360815,27364778	Gene ID= ENSG00000077238.13 TPM= 13.18 Transcript Type= NA
chr16	27313566	27364778	27313566	27364778	+	transcript2890.chr16.nic@IL4R	transcript2890.chr16.nic	protein_coding	27313566,27330066,27340186,27342121,27344869,27352540,27355808,27358916,27360766,27362252	27314020,27330198,27340273,27342259,27345020,27352696,27355907,27358994,27360815,27364778	Gene ID= ENSG00000077238.13 TPM= 12.01 Transcript Type= NA
chr16	27313900	27364778	27313900	27364778	+	transcript2894.chr16.nic@IL4R	transcript2894.chr16.nic	protein_coding	27313900,27340186,27342121,27344869,27346467,27352540,27355808,27358916,27360766,27362252	27314231,27340273,27342259,27345020,27346618,27352696,27355907,27358994,27360815,27364778	Gene ID= ENSG00000077238.13 TPM= 15.75 Transcript Type= NA
chr16	27313913	27364778	27313913	27364778	+	ENST00000395762.6@IL4R	ENST00000395762.6	protein_coding	27313913,27330066,27340186,27342121,27344869,27346467,27352540,27355808,27358916,27360766,27362252	27314020,27330198,27340273,27342259,27345020,27346618,27352696,27355907,27358994,27360815,27364778	Gene ID= ENSG00000077238.13 TPM= 33.26 Transcript Type= protein_coding
chr16	27313926	27364778	27313926	27364778	+	ENST00000543915.6@IL4R	ENST00000543915.6	protein_coding	27313926,27340186,27342121,27344869,27346467,27352540,27355808,27358916,27360766,27362252	27314020,27340273,27342259,27345020,27346618,27352696,27355907,27358994,27360815,27364778	Gene ID= ENSG00000077238.13 TPM= 16.92 Transcript Type= protein_coding
chr16	27322105	27325779	27322105	27325779	-	transcript2912.chr16.nnic@NA	transcript2912.chr16.nnic	NA	27322105	27325779	Gene ID= novel_gene_chr16_2913 TPM= 4.67 Transcript Type= NA
chr16	27402174	27450073	27402174	27450073	+	ENST00000564089.5@IL21R	ENST00000564089.5	protein_coding	27402174,27403080,27430056,27434347,27437488,27442962,27444542,27445177,27446007,27448534	27402618,27403220,27430120,27434449,27437687,27443116,27444719,27445276,27446088,27450073	Gene ID= ENSG00000103522.15 TPM= 1.17 Transcript Type= protein_coding
chr16	27402162	27452042	27402162	27452042	+	ENST00000337929.7@IL21R	ENST00000337929.7	protein_coding	27402162,27430056,27434347,27437488,27442962,27444542,27445177,27446007,27448534	27402618,27430120,27434449,27437687,27443116,27444719,27445276,27446088,27452042	Gene ID= ENSG00000103522.15 TPM= 4.67 Transcript Type= protein_coding
chr16	27427244	27450485	27427244	27450485	+	ENST00000395754.4@IL21R	ENST00000395754.4	protein_coding	27427244,27430056,27434347,27437488,27442962,27444542,27445177,27446007,27448534	27427361,27430120,27434449,27437687,27443116,27444719,27445276,27446088,27450485	Gene ID= ENSG00000103522.15 TPM= 1.17 Transcript Type= protein_coding
chr16	27460613	27464916	27460613	27464916	-	transcript2923.chr16.nic@GTF3C1	transcript2923.chr16.nic	protein_coding	27462294,27460613	27464916,27461562	Gene ID= ENSG00000077235.17 TPM= 2.34 Transcript Type= NA
chr16	27460613	27549913	27460613	27549913	-	ENST00000561623.5@GTF3C1	ENST00000561623.5	protein_coding	27549670,27545314,27538180,27537784,27533291,27528598,27511749,27508540,27506847,27505899,27502859,27501191,27498630,27497637,27495211,27494763,27493199,27492617,27492338,27489602,27489043,27488554,27488227,27485997,27484211,27483044,27481079,27478469,27476451,27471748,27470108,27469291,27465260,27464395,27463541,27462294,27460613	27549913,27545523,27538356,27537927,27533387,27528721,27511901,27508655,27507156,27506116,27502995,27501344,27498733,27497821,27495492,27494908,27493296,27492713,27492515,27489743,27489178,27488635,27488415,27486154,27484353,27483125,27481191,27478531,27476544,27471920,27470395,27469550,27465540,27464836,27463592,27462486,27461562	Gene ID= ENSG00000077235.17 TPM= 24.52 Transcript Type= protein_coding
chr16	27460678	27549906	27460678	27549906	-	ENST00000356183.8@GTF3C1	ENST00000356183.8	protein_coding	27549670,27545314,27538180,27537784,27533291,27528598,27511749,27508540,27506847,27505899,27502859,27501191,27498630,27497637,27495211,27494763,27493199,27492617,27492338,27489602,27489043,27488554,27488227,27485997,27484211,27483044,27481079,27478469,27476451,27471748,27470108,27469291,27465260,27464320,27463541,27462294,27460678	27549906,27545523,27538356,27537927,27533387,27528721,27511901,27508655,27507156,27506116,27502995,27501344,27498733,27497821,27495492,27494908,27493296,27492713,27492515,27489743,27489178,27488635,27488415,27486154,27484353,27483125,27481191,27478531,27476544,27471920,27470395,27469550,27465540,27464836,27463592,27462486,27461562	Gene ID= ENSG00000077235.17 TPM= 11.68 Transcript Type= protein_coding
chr16	28097979	28211950	28097979	28211950	-	transcript2934.chr16.nnic@XPO6	transcript2934.chr16.nnic	protein_coding	28211366,28180941,28175898,28169750,28166508,28156074,28152659,28146094,28135216,28133841,28132334,28125689,28121670,28117318,28112904,28111817,28107522,28106383,28106043,28104546,28101847,28101458,28097979	28211950,28181031,28176095,28169909,28166585,28156527,28152785,28146203,28135324,28133933,28132403,28125848,28121762,28117462,28113050,28112006,28107677,28106497,28106214,28104707,28101945,28101688,28098639	Gene ID= ENSG00000169180.11 TPM= 50.01 Transcript Type= NA
chr16	28097976	28154279	28097976	28154279	-	transcript2938.chr16.nnic@XPO6	transcript2938.chr16.nnic	protein_coding	28152659,28146086,28135216,28133841,28132329,28125689,28121670,28117318,28112904,28111817,28107522,28106383,28106043,28104546,28101847,28097976	28154279,28146203,28135320,28133935,28132406,28125843,28121762,28117462,28113050,28112006,28107677,28106497,28106214,28104707,28101945,28101688	Gene ID= ENSG00000169180.11 TPM= 29.58 Transcript Type= NA
chr16	28097995	28211869	28097995	28211869	-	ENST00000304658.9@XPO6	ENST00000304658.9	protein_coding	28211366,28180941,28177220,28175898,28169750,28166508,28156074,28152659,28146094,28135216,28133841,28132334,28125689,28121670,28117318,28112904,28111817,28107522,28106383,28106043,28104546,28101847,28101458,28097995	28211869,28181031,28177332,28176095,28169909,28166585,28156527,28152785,28146203,28135324,28133933,28132403,28125848,28121762,28117462,28113050,28112006,28107677,28106497,28106214,28104707,28101945,28101688,28098639	Gene ID= ENSG00000169180.11 TPM= 20.82 Transcript Type= protein_coding
chr16	28292519	28323849	28292519	28323849	+	ENST00000341901.4@SBK1	ENST00000341901.4	protein_coding	28292519,28317385,28318995,28320076	28293300,28317617,28319197,28323849	Gene ID= ENSG00000188322.4 TPM= 2.34 Transcript Type= protein_coding
chr16	28477280	28494265	28477280	28494265	-	transcript2945.chr16.nic@CLN3	transcript2945.chr16.nic	protein_coding	28493495,28492020,28491714,28491482,28489290,28488591,28487662,28487456,28486578,28486347,28484006,28482626,28482477,28482327,28482105,28477737,28477280	28494265,28492195,28491835,28491560,28489386,28488662,28487741,28487541,28486650,28486490,28484118,28482672,28482545,28482382,28482198,28477877,28477635	Gene ID= ENSG00000188603.18 TPM= 7.01 Transcript Type= NA
chr16	28475351	28492293	28475351	28492293	-	ENST00000636147.1@CLN3	ENST00000636147.1	protein_coding	28492020,28491714,28491482,28489290,28488591,28487662,28487456,28486578,28486347,28484006,28482626,28482477,28482327,28482105,28477737,28475351	28492293,28491835,28491560,28489386,28488662,28487741,28487541,28486650,28486490,28484118,28482672,28482545,28482382,28482198,28477877,28477635	Gene ID= ENSG00000188603.18 TPM= 9.34 Transcript Type= protein_coding
chr16	28477272	28492074	28477272	28492074	-	ENST00000359984.12@CLN3	ENST00000359984.12	protein_coding	28491714,28491482,28489290,28488591,28487662,28487456,28486578,28486347,28484006,28482626,28482477,28482327,28482105,28477737,28477272	28492074,28491560,28489386,28488662,28487741,28487541,28486650,28486490,28484118,28482672,28482545,28482382,28482198,28477877,28477635	Gene ID= ENSG00000188603.18 TPM= 61.88 Transcript Type= protein_coding
chr16	28477294	28495550	28477294	28495550	-	ENST00000569430.6@CLN3	ENST00000569430.6	protein_coding	28493495,28492020,28491714,28491482,28489290,28488591,28487662,28487456,28486578,28486347,28484006,28482626,28482477,28482327,28482105,28477737,28477294	28495550,28492215,28491835,28491560,28489386,28488662,28487741,28487541,28486650,28486490,28484118,28482672,28482545,28482382,28482198,28477877,28477635	Gene ID= ENSG00000188603.18 TPM= 54.88 Transcript Type= protein_coding
chr16	28477280	28492005	28477280	28492005	-	ENST00000357857.14@CLN3	ENST00000357857.14	protein_coding	28491714,28489290,28488591,28487662,28487456,28486578,28486347,28484006,28482626,28482477,28482327,28482105,28477737,28477280	28492005,28489386,28488662,28487741,28487541,28486650,28486490,28484118,28482672,28482545,28482382,28482198,28477877,28477635	Gene ID= ENSG00000188603.18 TPM= 5.84 Transcript Type= protein_coding
chr16	28494649	28498970	28494649	28498970	+	ENST00000431282.2@APOBR	ENST00000431282.2	protein_coding	28494649,28495099,28496117,28498081,28498436	28494738,28496089,28497996,28498349,28498970	Gene ID= ENSG00000184730.10 TPM= 14.59 Transcript Type= protein_coding
chr16	28494649	28498970	28494649	28498970	+	ENST00000564831.5@APOBR	ENST00000564831.5	protein_coding	28494649,28495099,28498081,28498436	28494738,28497996,28498349,28498970	Gene ID= ENSG00000184730.10 TPM= 18.1 Transcript Type= protein_coding
chr16	28537372	28538986	28537372	28538986	-	transcript2963.chr16.nic@NUPR1	transcript2963.chr16.nic	protein_coding	28538526,28538006,28537372	28538986,28538155,28537669	Gene ID= ENSG00000176046.8 TPM= 32.69 Transcript Type= NA
chr16	28532708	28539174	28532708	28539174	-	ENST00000324873.7@NUPR1	ENST00000324873.7	protein_coding	28538796,28538006,28532708	28539174,28538155,28537669	Gene ID= ENSG00000176046.8 TPM= 428.51 Transcript Type= protein_coding
chr16	28553709	28554140	28553709	28554140	-	ENST00000613454.1@AC020765.2	ENST00000613454.1	antisense_RNA	28553709	28554140	Gene ID= ENSG00000275441.1 TPM= 1.17 Transcript Type= antisense_RNA
chr16	28553926	28591790	28553926	28591790	+	ENST00000317058.7@SGF29	ENST00000317058.7	protein_coding	28553926,28581055,28584913,28585648,28589100,28590096,28590296,28590631,28590773,28591590	28554097,28581144,28584988,28585720,28589164,28590225,28590442,28590666,28590935,28591790	Gene ID= ENSG00000176476.8 TPM= 23.35 Transcript Type= protein_coding
chr16	28591943	28597109	28591943	28597109	-	ENST00000335715.8@SULT1A2	ENST00000335715.8	protein_coding	28596997,28595783,28595550,28595367,28593442,28593252,28592263,28591943	28597109,28595934,28595675,28595464,28593568,28593346,28592443,28592140	Gene ID= ENSG00000197165.10 TPM= 5.84 Transcript Type= protein_coding
chr16	28594093	28596122	28594093	28596122	-	transcript2994.chr16.nic@SULT1A2	transcript2994.chr16.nic	protein_coding	28595783,28594093	28596122,28595675	Gene ID= ENSG00000197165.10 TPM= 2.34 Transcript Type= NA
chr16	28605592	28623585	28605592	28623585	-	transcript2979.chr16.nnic@SULT1A1	transcript2979.chr16.nnic	protein_coding	28623131,28620063,28610130,28609931,28608708,28608478,28608291,28606951,28606761,28606056,28605592	28623585,28620133,28610191,28609989,28608859,28608603,28608388,28607077,28606855,28606236,28605933	Gene ID= ENSG00000196502.11 TPM= 39.7 Transcript Type= NA
chr16	28605592	28623585	28605592	28623585	-	transcript2983.chr16.nnic@SULT1A1	transcript2983.chr16.nnic	protein_coding	28623131,28620063,28610130,28609931,28608708,28608478,28606951,28606761,28606056,28605592	28623585,28620133,28610191,28609989,28608859,28608603,28608388,28606855,28606236,28605933	Gene ID= ENSG00000196502.11 TPM= 3.5 Transcript Type= NA
chr16	28605592	28609999	28605592	28609999	-	transcript2985.chr16.nnic@SULT1A1	transcript2985.chr16.nnic	protein_coding	28609931,28609059,28608708,28608478,28608291,28606951,28606761,28606056,28605592	28609999,28609222,28608859,28608603,28608388,28607077,28606855,28606236,28605933	Gene ID= ENSG00000196502.11 TPM= 4.67 Transcript Type= NA
chr16	28605587	28623252	28605587	28623252	-	ENST00000564818.5@SULT1A1	ENST00000564818.5	protein_coding	28623131,28620063,28609931,28609363,28608708,28608478,28608291,28606951,28606761,28606056,28605587	28623252,28620133,28610191,28609435,28608859,28608603,28608388,28607077,28606855,28606236,28605933	Gene ID= ENSG00000196502.11 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr16	28688558	28735598	28688558	28735598	+	ENST00000566501.5@EIF3C	ENST00000566501.5	protein_coding	28688558,28711657,28713701,28713909,28714321,28714636,28714819,28715307,28723164,28723448,28724322,28724658,28724919,28726605,28727021,28731829,28734520,28734778,28734932,28735173,28735431	28688828,28711787,28713766,28714098,28714446,28714690,28714928,28715434,28723323,28723551,28724463,28724783,28725012,28726795,28727245,28732192,28734679,28734843,28735019,28735335,28735598	Gene ID= ENSG00000184110.14 TPM= 32.98 Transcript Type= protein_coding
chr16	28711363	28735730	28711363	28735730	+	ENST00000331666.10@EIF3C	ENST00000331666.10	protein_coding	28711363,28711657,28713701,28713909,28714321,28714636,28714819,28715307,28723164,28723448,28724322,28724658,28724919,28726605,28727021,28731829,28734520,28734778,28734932,28735173,28735431	28711518,28711787,28713766,28714098,28714446,28714690,28714928,28715434,28723323,28723551,28724463,28724783,28725012,28726795,28727245,28732192,28734679,28734843,28735019,28735335,28735730	Gene ID= ENSG00000184110.14 TPM= 858.47 Transcript Type= protein_coding
chr16	28711474	28735596	28711474	28735596	+	ENST00000564243.5@EIF3C	ENST00000564243.5	protein_coding	28711474,28711657,28713701,28713909,28714351,28714636,28714819,28715307,28723164,28723448,28724322,28724658,28724919,28726605,28727021,28731829,28734520,28734778,28734932,28735173,28735431	28711518,28711787,28713766,28714098,28714446,28714690,28714928,28715434,28723323,28723551,28724463,28724783,28725012,28726795,28727245,28732192,28734679,28734843,28735019,28735335,28735596	Gene ID= ENSG00000184110.14 TPM= 818.78 Transcript Type= protein_coding
chr16	28711527	28735597	28711527	28735597	+	ENST00000566866.5@EIF3C	ENST00000566866.5	protein_coding	28711527,28713701,28713909,28714321,28714636,28714819,28715307,28723164,28723448,28724322,28724658,28724919,28726605,28727021,28731829,28734520,28734778,28734932,28735173,28735431	28711787,28713766,28714098,28714446,28714690,28714928,28715434,28723323,28723551,28724463,28724783,28725012,28726795,28727245,28732192,28734679,28734843,28735019,28735335,28735597	Gene ID= ENSG00000184110.14 TPM= 25.98 Transcript Type= protein_coding
chr16	28822431	28823969	28822431	28823969	-	ENST00000614819.1@AC145285.7	ENST00000614819.1	antisense_RNA	28822431	28823969	Gene ID= ENSG00000275807.1 TPM= 1.17 Transcript Type= antisense_RNA
chr16	28822999	28828069	28822999	28828069	+	transcript3014.chr16.nic@ATXN2L	transcript3014.chr16.nic	protein_coding	28822999,28825366,28825624,28825770,28826240,28826862	28823558,28825402,28825680,28825841,28826390,28828069	Gene ID= ENSG00000168488.18 TPM= 2.34 Transcript Type= NA
chr16	28823048	28837237	28823048	28837237	+	ENST00000340394.12@ATXN2L	ENST00000340394.12	protein_coding	28823048,28825366,28825624,28825770,28826240,28826862,28829401,28829858,28830615,28830962,28832205,28832496,28832817,28833059,28833439,28834065,28834343,28834506,28835058,28835278,28835549,28835933,28836728	28823558,28825402,28825680,28825841,28826390,28826986,28829492,28830058,28830790,28831072,28832399,28832567,28832887,28833354,28833508,28834211,28834415,28834693,28835187,28835399,28835758,28836122,28837237	Gene ID= ENSG00000168488.18 TPM= 36.2 Transcript Type= protein_coding
chr16	28823099	28825052	28823099	28825052	+	transcript3019.chr16.nnic@NA	transcript3019.chr16.nnic	NA	28823099	28825052	Gene ID= novel_gene_chr16_3020 TPM= 2.34 Transcript Type= NA
chr16	28842787	28846366	28842787	28846366	-	transcript3009.chr16.nic@TUFM	transcript3009.chr16.nic	protein_coding	28846218,28845912,28845314,28844951,28844698,28844419,28843950,28843736,28842787	28846366,28846106,28845480,28845055,28844862,28844551,28844334,28843855,28843148	Gene ID= ENSG00000178952.10 TPM= 14.01 Transcript Type= NA
chr16	28863826	28874205	28863826	28874205	+	transcript3056.chr16.nic@SH2B1	transcript3056.chr16.nic	protein_coding	28863826,28866012,28867331,28869006,28869208,28871780,28872190,28872534,28873170,28873447	28863945,28867033,28867432,28869097,28869383,28871983,28872401,28872705,28873269,28874205	Gene ID= ENSG00000178188.14 TPM= 21.02 Transcript Type= NA
chr16	28863805	28874205	28863805	28874205	+	ENST00000359285.9@SH2B1	ENST00000359285.9	protein_coding	28863805,28866012,28867331,28869006,28869208,28871780,28872190,28872534,28873170,28873447	28863945,28867033,28867432,28869097,28869383,28871983,28872401,28872758,28873269,28874205	Gene ID= ENSG00000178188.14 TPM= 5.84 Transcript Type= protein_coding
chr16	28863826	28874205	28863826	28874205	+	transcript3067.chr16.nnic@SH2B1	transcript3067.chr16.nnic	protein_coding	28863826,28866012,28867331,28869006,28869208,28872190,28872534,28873170,28873447	28863945,28867033,28867432,28869097,28869383,28872401,28872705,28873269,28874205	Gene ID= ENSG00000178188.14 TPM= 5.45 Transcript Type= NA
chr16	28862804	28874201	28862804	28874201	+	ENST00000337120.9@SH2B1	ENST00000337120.9	protein_coding	28862804,28867331,28869006,28869208,28871780,28872190,28872534,28873170,28873447	28867033,28867432,28869097,28869383,28871983,28872401,28872705,28873269,28874201	Gene ID= ENSG00000178188.14 TPM= 28.41 Transcript Type= protein_coding
chr16	28904421	28924711	28904421	28924711	-	transcript3048.chr16.nic@RABEP2	transcript3048.chr16.nic	protein_coding	28924403,28919786,28914672,28914236,28911084,28910888,28908609,28906019,28905867,28905704,28905397,28904421	28924711,28919943,28914782,28914586,28911179,28910986,28908764,28906196,28905878,28905759,28905513,28905044	Gene ID= ENSG00000177548.12 TPM= 2.92 Transcript Type= NA
chr16	28904421	28925752	28904421	28925752	-	ENST00000358201.8@RABEP2	ENST00000358201.8	protein_coding	28925103,28924403,28919786,28914672,28914236,28911084,28910888,28908609,28906019,28905867,28905704,28905397,28904421	28925752,28924615,28919943,28914782,28914586,28911179,28910986,28908764,28906196,28905878,28905759,28905513,28905044	Gene ID= ENSG00000177548.12 TPM= 54.29 Transcript Type= protein_coding
chr16	28936801	28939346	28936801	28939346	+	transcript3073.chr16.nic@CD19	transcript3073.chr16.nic	protein_coding	28936801,28937271,28937455,28937624,28937769,28938676,28938872,28939141	28937136,28937375,28937523,28937680,28937825,28938768,28938978,28939346	Gene ID= ENSG00000177455.12 TPM= 2.34 Transcript Type= NA
chr16	28950937	28967097	28950937	28967097	+	ENST00000320805.8@NFATC2IP	ENST00000320805.8	protein_coding	28950937,28952132,28954565,28955978,28956151,28958717,28958991,28963705	28951398,28952204,28954682,28956058,28956337,28958861,28959100,28967097	Gene ID= ENSG00000176953.12 TPM= 28.02 Transcript Type= protein_coding
chr16	28950969	28964670	28950969	28964670	+	transcript3079.chr16.nic@NFATC2IP	transcript3079.chr16.nic	protein_coding	28950969,28952132,28954565,28956151,28958717,28958991,28963705	28951398,28952204,28956058,28956337,28958861,28959100,28964670	Gene ID= ENSG00000176953.12 TPM= 7.01 Transcript Type= NA
chr16	28952744	28955879	28952744	28955879	-	transcript3104.chr16.nnic@NA	transcript3104.chr16.nnic	NA	28952744	28955879	Gene ID= novel_gene_chr16_3105 TPM= 7.01 Transcript Type= NA
chr16	28974774	28984543	28974774	28984543	+	transcript3031.chr16.nic@SPNS1	transcript3031.chr16.nic	protein_coding	28974774,28975184,28975492,28977908,28979155,28979405,28981470,28981901,28982356,28982857,28983192,28983786,28984205	28975100,28975392,28975557,28978044,28979306,28979471,28981615,28982056,28982545,28982922,28983290,28983957,28984543	Gene ID= ENSG00000169682.17 TPM= 14.31 Transcript Type= NA
chr16	28974772	28984548	28974772	28984548	+	ENST00000565975.5@SPNS1	ENST00000565975.5	protein_coding	28974772,28975101,28975492,28977908,28979155,28979405,28981470,28981901,28982356,28982857,28983192,28983786,28984205	28974863,28975392,28975557,28978044,28979306,28979471,28981615,28982056,28982545,28982922,28983290,28983957,28984548	Gene ID= ENSG00000169682.17 TPM= 20.06 Transcript Type= protein_coding
chr16	28974748	28984543	28974748	28984543	+	transcript3039.chr16.nnic@SPNS1	transcript3039.chr16.nnic	protein_coding	28974748,28975492,28977908,28978946,28979405,28981470,28981901,28982356,28982857,28983192,28983786,28984205	28975392,28975557,28978044,28979306,28979471,28981615,28982056,28982545,28982922,28983290,28983957,28984543	Gene ID= ENSG00000169682.17 TPM= 11.1 Transcript Type= NA
chr16	28974748	28984517	28974748	28984517	+	transcript3051.chr16.nic@SPNS1	transcript3051.chr16.nic	protein_coding	28974748,28975492,28977908,28979155,28979405,28981470,28981901,28982356,28982857,28983192,28984205	28975392,28975557,28978044,28979306,28979471,28981615,28982056,28982545,28982922,28983290,28984517	Gene ID= ENSG00000169682.17 TPM= 5.84 Transcript Type= NA
chr16	28974775	28984543	28974775	28984543	+	ENST00000311008.15@SPNS1	ENST00000311008.15	protein_coding	28974775,28975492,28977908,28979155,28979405,28981470,28981901,28982356,28982857,28983192,28983786,28984205	28975392,28975557,28978044,28979306,28979471,28981615,28982056,28982545,28982922,28983290,28983957,28984543	Gene ID= ENSG00000169682.17 TPM= 122.9 Transcript Type= protein_coding
chr16	28974794	28984543	28974794	28984543	+	ENST00000323081.12@SPNS1	ENST00000323081.12	protein_coding	28974794,28975188,28975492,28977908,28979155,28979405,28981470,28981901,28982356,28982857,28983192,28983786,28984205	28975100,28975392,28975557,28978044,28979306,28979471,28981615,28982056,28982545,28982922,28983290,28983957,28984543	Gene ID= ENSG00000169682.17 TPM= 24.82 Transcript Type= protein_coding
chr16	28974801	28984544	28974801	28984544	+	ENST00000334536.12@SPNS1	ENST00000334536.12	protein_coding	28974801,28975492,28977908,28979155,28979405,28981470,28982356,28982857,28983192,28983786,28984205	28975392,28975557,28978044,28979306,28979471,28981615,28982545,28982922,28983290,28983957,28984544	Gene ID= ENSG00000169682.17 TPM= 11.98 Transcript Type= protein_coding
chr16	28985123	28990449	28985123	28990449	+	ENST00000454369.6@LAT	ENST00000454369.6	protein_coding	28985123,28985713,28985854,28986135,28986385,28986540,28986657,28986799,28989527,28989774,28989933,28990189	28985517,28985740,28985888,28986216,28986446,28986569,28986714,28986893,28989589,28989839,28990019,28990449	Gene ID= ENSG00000213658.11 TPM= 2.34 Transcript Type= protein_coding
chr16	28985066	28990783	28985066	28990783	+	ENST00000354453.7@LAT	ENST00000354453.7	protein_coding	28985066,28985713,28985854,28986135,28986382,28986430,28986540,28986799,28989527,28989774,28989933,28990189	28985517,28985740,28985888,28986216,28986399,28986446,28986714,28986893,28989589,28989839,28990019,28990783	Gene ID= ENSG00000213658.11 TPM= 3.5 Transcript Type= protein_coding
chr16	29104512	29108156	29104512	29108156	-	transcript3108.chr16.nic@AC009093.3	transcript3108.chr16.nic	transcribed_unprocessed_pseudogene	29108029,29107355,29104512	29108156,29107697,29105139	Gene ID= ENSG00000260908.1 TPM= 10.51 Transcript Type= NA
chr16	29116009	29217860	29116009	29217860	+	transcript3110.chr16.nic@AC009093.8	transcript3110.chr16.nic	transcribed_unprocessed_pseudogene	29116009,29217481	29116326,29217860	Gene ID= ENSG00000284649.1 TPM= 3.5 Transcript Type= NA
chr16	29443230	29454347	29443230	29454347	-	ENST00000569622.5@BOLA2-SMG1P6	ENST00000569622.5	protein_coding	29454191,29454016,29446802,29444398,29443230	29454347,29454113,29446922,29444499,29443688	Gene ID= ENSG00000261740.6 TPM= 10.51 Transcript Type= protein_coding
chr16	29454501	29458219	29454501	29458219	+	ENST00000330181.9@SLX1B	ENST00000330181.9	protein_coding	29454501,29455398,29455544,29457632,29457928,29458095	29454930,29455449,29455885,29457759,29458015,29458219	Gene ID= ENSG00000181625.17 TPM= 21.02 Transcript Type= protein_coding
chr16	29545011	29595402	29545011	29595402	-	transcript3115.chr16.nnic@SMG1P2	transcript3115.chr16.nnic	unprocessed_pseudogene	29594887,29569271,29566086,29565351,29561515,29560157,29558665,29554867,29554416,29553086,29551189,29548538,29546166,29545011	29595402,29569328,29566249,29565506,29561651,29560215,29558878,29554992,29554488,29553183,29551361,29548762,29546267,29545450	Gene ID= ENSG00000205534.6 TPM= 2.34 Transcript Type= NA
chr16	29663219	29670490	29663219	29670490	+	ENST00000360121.4@SPN	ENST00000360121.4	protein_coding	29663219,29663695	29663316,29670490	Gene ID= ENSG00000197471.11 TPM= 15.18 Transcript Type= protein_coding
chr16	29663255	29670876	29663255	29670876	+	ENST00000563039.2@SPN	ENST00000563039.2	protein_coding	29663255,29663695,29670473	29663316,29665081,29670876	Gene ID= ENSG00000197471.11 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr16	29742463	29746006	29742463	29746006	-	ENST00000329410.3@C16orf54	ENST00000329410.3	protein_coding	29745911,29742463	29746006,29744951	Gene ID= ENSG00000185905.3 TPM= 17.51 Transcript Type= protein_coding
chr16	29790736	29805384	29790736	29805384	+	transcript3169.chr16.nic@KIF22	transcript3169.chr16.nic	protein_coding	29790736,29796893,29798374,29798593,29798975,29799264,29799628,29799913,29802769,29803449,29803998,29805115,29805263	29790829,29797088,29798501,29798747,29799184,29799494,29799781,29800048,29802937,29803608,29805026,29805174,29805384	Gene ID= ENSG00000079616.12 TPM= 19.27 Transcript Type= NA
chr16	29790720	29805385	29790720	29805385	+	ENST00000160827.8@KIF22	ENST00000160827.8	protein_coding	29790720,29796893,29798374,29798593,29798975,29799264,29799628,29799913,29802769,29803449,29803998,29804814,29805115,29805263	29790829,29797088,29798501,29798747,29799184,29799494,29799781,29800048,29802937,29803608,29804065,29805026,29805174,29805385	Gene ID= ENSG00000079616.12 TPM= 25.1 Transcript Type= protein_coding
chr16	29806106	29811160	29806106	29811160	+	ENST00000545521.5@MAZ	ENST00000545521.5	protein_coding	29806106,29806807,29806978,29808230,29808570,29810077	29806180,29806893,29807828,29808293,29808741,29811160	Gene ID= ENSG00000103495.13 TPM= 46.12 Transcript Type= protein_coding
chr16	29806537	29811164	29806537	29811164	+	ENST00000322945.10@MAZ	ENST00000322945.10	protein_coding	29806537,29806978,29808230,29808570,29810077	29806893,29807828,29808293,29808741,29811164	Gene ID= ENSG00000103495.13 TPM= 119.68 Transcript Type= protein_coding
chr16	29806596	29811164	29806596	29811164	+	ENST00000219782.10@MAZ	ENST00000219782.10	protein_coding	29806596,29806978,29808230,29808570,29809540,29810077	29806893,29807828,29808293,29808741,29809764,29811164	Gene ID= ENSG00000103495.13 TPM= 83.75 Transcript Type= protein_coding
chr16	29808051	29811125	29808051	29811125	+	ENST00000568544.5@MAZ	ENST00000568544.5	protein_coding	29808051,29808570,29810077	29808293,29808741,29811125	Gene ID= ENSG00000103495.13 TPM= 18.68 Transcript Type= protein_coding
chr16	29808146	29811128	29808146	29811128	+	ENST00000568282.1@MAZ	ENST00000568282.1	protein_coding	29808146,29808570,29809540,29810088	29808293,29808741,29809771,29811128	Gene ID= ENSG00000103495.13 TPM= 4.67 Transcript Type= protein_coding
chr16	29808636	29811985	29808636	29811985	-	ENST00000569981.2@AC009133.1	ENST00000569981.2	antisense_RNA	29810035,29808636	29811985,29809133	Gene ID= ENSG00000238045.9 TPM= 9.26 Transcript Type= antisense_RNA
chr16	29808644	29811107	29808644	29811107	-	transcript3211.chr16.nnic@NA	transcript3211.chr16.nnic	NA	29808644	29811107	Gene ID= novel_gene_chr16_3212 TPM= 2.34 Transcript Type= NA
chr16	29815952	29820117	29815952	29820117	+	ENST00000320330.7@PAGR1	ENST00000320330.7	protein_coding	29815952,29817210,29819555	29817007,29817292,29820117	Gene ID= ENSG00000280789.1 TPM= 64.22 Transcript Type= protein_coding
chr16	29820394	29848039	29820394	29848039	+	ENST00000395353.5@MVP	ENST00000395353.5	protein_coding	29820394,29830474,29830878,29833733,29833935,29835704,29836722,29840178,29841596,29841915,29844493,29845863,29846158,29847197,29847762	29820510,29830674,29831073,29833856,29834066,29835798,29836958,29840459,29841840,29842112,29844879,29845979,29846284,29847385,29848039	Gene ID= ENSG00000013364.18 TPM= 157.04 Transcript Type= protein_coding
chr16	29820408	29848039	29820408	29848039	+	ENST00000357402.9@MVP	ENST00000357402.9	protein_coding	29820408,29830515,29830878,29833733,29833935,29835704,29836722,29840178,29841596,29841915,29844493,29845863,29846158,29847197,29847762	29820510,29830674,29831073,29833856,29834066,29835798,29836958,29840459,29841840,29842112,29844879,29845979,29846284,29847385,29848039	Gene ID= ENSG00000013364.18 TPM= 377.72 Transcript Type= protein_coding
chr16	29858357	29863736	29858357	29863736	-	ENST00000219789.10@CDIPT	ENST00000219789.10	protein_coding	29862815,29862586,29861106,29860581,29859442,29858357	29863736,29862720,29861259,29860662,29859523,29859334	Gene ID= ENSG00000103502.13 TPM= 211.92 Transcript Type= protein_coding
chr16	29858358	29863265	29858358	29863265	-	transcript3228.chr16.nic@CDIPT	transcript3228.chr16.nic	protein_coding	29862586,29861106,29860581,29859442,29858358	29863265,29861259,29860662,29859523,29859334	Gene ID= ENSG00000103502.13 TPM= 29.77 Transcript Type= NA
chr16	29858372	29863204	29858372	29863204	-	ENST00000566113.5@CDIPT	ENST00000566113.5	protein_coding	29862815,29861106,29860581,29859442,29858372	29863204,29861259,29860662,29859523,29859334	Gene ID= ENSG00000103502.13 TPM= 9.92 Transcript Type= protein_coding
chr16	29871159	29899547	29871159	29899547	-	ENST00000308713.9@SEZ6L2	ENST00000308713.9	protein_coding	29898941,29897853,29896822,29895721,29895259,29888540,29887649,29885586,29879864,29878287,29877271,29876756,29873538,29873240,29872409,29872187,29871159	29899547,29897984,29897121,29895860,29895460,29888725,29887817,29885749,29880064,29878425,29877467,29876950,29873729,29873431,29872526,29872283,29871728	Gene ID= ENSG00000174938.14 TPM= 8.17 Transcript Type= protein_coding
chr16	29906336	29926228	29906336	29926228	-	transcript3234.chr16.nnic@KCTD13	transcript3234.chr16.nnic	protein_coding	29925790,29923190,29911960,29911815,29911478,29910978,29906336	29926228,29923359,29912049,29911867,29911557,29911173,29907108	Gene ID= ENSG00000174943.9 TPM= 6.62 Transcript Type= NA
chr16	29906336	29926228	29906336	29926228	-	transcript3237.chr16.nnic@KCTD13	transcript3237.chr16.nnic	protein_coding	29925790,29923136,29911960,29911815,29910978,29906336	29926228,29923359,29912049,29911867,29911173,29907108	Gene ID= ENSG00000174943.9 TPM= 3.12 Transcript Type= NA
chr16	29906336	29927035	29906336	29927035	-	ENST00000568000.5@KCTD13	ENST00000568000.5	protein_coding	29925790,29923190,29911960,29911815,29910978,29906336	29927035,29923359,29912049,29911867,29911173,29907108	Gene ID= ENSG00000174943.9 TPM= 21.8 Transcript Type= protein_coding
chr16	29922034	29926236	29922034	29926236	-	ENST00000561540.1@KCTD13	ENST00000561540.1	protein_coding	29925790,29922034	29926236,29923359	Gene ID= ENSG00000174943.9 TPM= 1.17 Transcript Type= protein_coding
chr16	29962030	29973052	29962030	29973052	+	ENST00000279396.10@TMEM219	ENST00000279396.10	protein_coding	29962030,29963107,29963400,29968025,29971408,29972950	29962132,29963308,29963589,29968254,29971578,29973052	Gene ID= ENSG00000149932.16 TPM= 158.21 Transcript Type= protein_coding
chr16	29962093	29973047	29962093	29973047	+	transcript3276.chr16.nnic@TMEM219	transcript3276.chr16.nnic	protein_coding	29962093,29962391,29963400,29968025,29971408,29972950	29962132,29963308,29963589,29968254,29971578,29973047	Gene ID= ENSG00000149932.16 TPM= 34.44 Transcript Type= NA
chr16	29962109	29973048	29962109	29973048	+	transcript3294.chr16.nic@TMEM219	transcript3294.chr16.nic	protein_coding	29962109,29963400,29968025,29971408	29963308,29963589,29968254,29973048	Gene ID= ENSG00000149932.16 TPM= 12.84 Transcript Type= NA
chr16	29962104	29972005	29962104	29972005	+	ENST00000561899.6@TMEM219	ENST00000561899.6	protein_coding	29962104,29963107,29963400,29968025,29971408	29962132,29963308,29963589,29968254,29972005	Gene ID= ENSG00000149932.16 TPM= 1.17 Transcript Type= protein_coding
chr16	29973855	29988390	29973855	29988390	+	transcript3254.chr16.nnic@TAOK2	transcript3254.chr16.nnic	protein_coding	29973855,29977738,29978089,29978252,29978799,29978974,29979195,29979417,29981661,29981859,29982734,29983072,29983503,29985213,29985658,29986265,29988359	29974648,29977904,29978160,29978353,29978844,29979070,29979308,29979508,29981754,29981940,29982901,29983332,29983664,29985578,29985861,29986504,29988390	Gene ID= ENSG00000149930.17 TPM= 14.59 Transcript Type= NA
chr16	29973641	29988398	29973641	29988398	+	ENST00000308893.8@TAOK2	ENST00000308893.8	protein_coding	29973641,29977738,29978089,29978252,29978799,29978974,29979195,29979417,29981661,29981859,29982734,29983072,29983503,29985213,29985658,29986265	29974648,29977904,29978160,29978353,29978844,29979070,29979308,29979508,29981754,29981940,29982901,29983332,29983664,29985578,29985861,29988398	Gene ID= ENSG00000149930.17 TPM= 55.46 Transcript Type= protein_coding
chr16	29988267	29989453	29988267	29989453	-	transcript3299.chr16.nnic@NA	transcript3299.chr16.nnic	NA	29988267	29989453	Gene ID= novel_gene_chr16_3300 TPM= 3.5 Transcript Type= NA
chr16	29992321	29996436	29992321	29996436	-	ENST00000279392.7@HIRIP3	ENST00000279392.7	protein_coding	29995541,29995343,29995103,29993906,29993640,29993459,29992321	29996436,29995463,29995217,29994843,29993808,29993557,29993370	Gene ID= ENSG00000149929.15 TPM= 2.34 Transcript Type= protein_coding
chr16	29992996	29996108	29992996	29996108	-	transcript3283.chr16.nic@HIRIP3	transcript3283.chr16.nic	protein_coding	29995541,29995343,29995103,29993906,29993459,29992996	29996108,29995463,29995217,29994843,29993808,29993370	Gene ID= ENSG00000149929.15 TPM= 3.5 Transcript Type= NA
chr16	29992990	29995643	29992990	29995643	-	ENST00000564026.1@HIRIP3	ENST00000564026.1	protein_coding	29995541,29995343,29995103,29993640,29993459,29992990	29995643,29995463,29995217,29993808,29993557,29993370	Gene ID= ENSG00000149929.15 TPM= 8.17 Transcript Type= protein_coding
chr16	29996242	30005790	29996242	30005790	+	transcript3262.chr16.nic@INO80E	transcript3262.chr16.nic	protein_coding	29996242,29996547,29996808,30000758,30000929,30001414,30004568,30005221	29996391,29996617,29996860,30000836,30001040,30001530,30004657,30005790	Gene ID= ENSG00000169592.14 TPM= 4.09 Transcript Type= NA
chr16	29995294	30005793	29995294	30005793	+	ENST00000563197.5@INO80E	ENST00000563197.5	protein_coding	29995294,29996547,29996808,30000758,30000929,30001414,30005221	29996391,29996617,29996860,30000836,30001040,30001530,30005793	Gene ID= ENSG00000169592.14 TPM= 8.76 Transcript Type= protein_coding
chr16	29996238	30005774	29996238	30005774	+	ENST00000569957.5@INO80E	ENST00000569957.5	protein_coding	29996238,29996547,29996808,30000758,30000929,30001212,30005221	29996391,29996617,29996860,30000836,30001040,30004657,30005774	Gene ID= ENSG00000169592.14 TPM= 3.5 Transcript Type= retained_intron
chr16	30053090	30070414	30053090	30070414	+	ENST00000338110.9@ALDOA	ENST00000338110.9	protein_coding	30053090,30053464,30054784,30055172,30063729,30064424,30067234,30067450,30068646,30068818,30069306,30069499,30069830,30070117	30053217,30053499,30054927,30055327,30064248,30064505,30067366,30067661,30068700,30068978,30069389,30069673,30070029,30070414	Gene ID= ENSG00000149925.17 TPM= 98.31 Transcript Type= protein_coding
chr16	30065734	30070411	30065734	30070411	+	ENST00000564595.6@ALDOA	ENST00000564595.6	protein_coding	30065734,30066885,30067234,30067450,30068646,30068818,30069306,30069499,30069830,30070117	30065927,30067038,30067366,30067661,30068700,30068978,30069389,30069673,30070029,30070411	Gene ID= ENSG00000149925.17 TPM= 22.03 Transcript Type= protein_coding
chr16	30065148	30070420	30065148	30070420	+	ENST00000564546.5@ALDOA	ENST00000564546.5	protein_coding	30065148,30067234,30067450,30068646,30068818,30069306,30069499,30069830,30070117	30065927,30067366,30067661,30068700,30068978,30069389,30069673,30070029,30070420	Gene ID= ENSG00000149925.17 TPM= 1009.65 Transcript Type= protein_coding
chr16	30064274	30070414	30064274	30070414	+	ENST00000563060.6@ALDOA	ENST00000563060.6	protein_coding	30064274,30067234,30067450,30068646,30068818,30069306,30069499,30069830,30070117	30064505,30067366,30067661,30068700,30068978,30069389,30069673,30070029,30070414	Gene ID= ENSG00000149925.17 TPM= 56.51 Transcript Type= protein_coding
chr16	30075990	30085377	30075990	30085377	+	ENST00000279387.11@PPP4C	ENST00000279387.11	protein_coding	30075990,30076315,30081259,30082484,30082746,30083394,30083655,30084666,30084933	30076094,30076475,30081310,30082534,30082847,30083567,30083781,30084855,30085377	Gene ID= ENSG00000149923.13 TPM= 255.7 Transcript Type= protein_coding
chr16	30076007	30085347	30076007	30085347	+	ENST00000563200.5@PPP4C	ENST00000563200.5	protein_coding	30076007,30076315,30081259,30082484,30082746,30083394,30084666,30084933	30076094,30076475,30081310,30082534,30082847,30083781,30084855,30085347	Gene ID= ENSG00000149923.13 TPM= 4.67 Transcript Type= retained_intron
chr16	30076023	30085356	30076023	30085356	+	ENST00000627746.2@PPP4C	ENST00000627746.2	protein_coding	30076023,30076315,30082484,30082746,30083394,30083655,30084666,30084933	30076094,30076475,30082534,30082847,30083567,30083781,30084855,30085356	Gene ID= ENSG00000149923.13 TPM= 14.01 Transcript Type= protein_coding
chr16	30092349	30096244	30092349	30096244	-	ENST00000398838.8@YPEL3	ENST00000398838.8	protein_coding	30096097,30095252,30095103,30094789,30092349	30096244,30095434,30095146,30094897,30092799	Gene ID= ENSG00000090238.11 TPM= 80.56 Transcript Type= protein_coding
chr16	30092314	30096200	30092314	30096200	-	ENST00000398841.5@YPEL3	ENST00000398841.5	protein_coding	30095252,30095103,30094789,30092314	30096200,30095146,30094897,30092799	Gene ID= ENSG00000090238.11 TPM= 43.2 Transcript Type= protein_coding
chr16	30096430	30104116	30096430	30104116	+	ENST00000515455.2@AC012645.1	ENST00000515455.2	antisense_RNA	30096430,30103457	30097419,30104116	Gene ID= ENSG00000250616.2 TPM= 1.17 Transcript Type= antisense_RNA
chr16	30104810	30113856	30104810	30113856	-	ENST00000406256.7@GDPD3	ENST00000406256.7	protein_coding	30113340,30113022,30112658,30112523,30112306,30112132,30111388,30108373,30108213,30104810	30113856,30113064,30112793,30112568,30112424,30112221,30111521,30108432,30108264,30105009	Gene ID= ENSG00000102886.14 TPM= 5.84 Transcript Type= protein_coding
chr16	30114108	30123286	30114108	30123286	-	transcript3345.chr16.nic@MAPK3	transcript3345.chr16.nic	protein_coding	30123040,30121824,30118349,30118047,30117670,30117154,30116894,30116636,30115595,30114108	30123286,30122006,30118538,30118163,30117784,30117285,30117003,30116790,30115645,30114708	Gene ID= ENSG00000102882.11 TPM= 28.02 Transcript Type= NA
chr16	30114105	30123294	30114105	30123294	-	ENST00000263025.8@MAPK3	ENST00000263025.8	protein_coding	30123040,30121824,30118349,30118047,30117670,30117154,30116894,30116636,30114105	30123294,30122006,30118538,30118163,30117784,30117285,30117003,30116790,30114708	Gene ID= ENSG00000102882.11 TPM= 136.61 Transcript Type= protein_coding
chr16	30183422	30189076	30183422	30189076	+	ENST00000219150.9@CORO1A	ENST00000219150.9	protein_coding	30183422,30185209,30186598,30186816,30187039,30187382,30187725,30187942,30188192,30188361,30188860	30183725,30185407,30186720,30186945,30187223,30187501,30187829,30188087,30188249,30188576,30189076	Gene ID= ENSG00000102879.15 TPM= 94.58 Transcript Type= protein_coding
chr16	30183605	30189075	30183605	30189075	+	ENST00000568763.1@CORO1A	ENST00000568763.1	protein_coding	30183605,30185209,30186816,30187039,30187382,30187725,30187942,30188192,30188361,30188860	30183725,30186720,30186945,30187223,30187501,30187829,30188087,30188249,30188576,30189075	Gene ID= ENSG00000102879.15 TPM= 7.01 Transcript Type= retained_intron
chr16	30192935	30194306	30192935	30194306	-	ENST00000305321.4@BOLA2B	ENST00000305321.4	protein_coding	30193533,30193358,30192935	30194306,30193455,30193074	Gene ID= ENSG00000169627.7 TPM= 12.84 Transcript Type= protein_coding
chr16	30192935	30193524	30192935	30193524	-	ENST00000565525.1@BOLA2B	ENST00000565525.1	protein_coding	30193358,30192935	30193524,30193074	Gene ID= ENSG00000169627.7 TPM= 2.34 Transcript Type= retained_intron
chr16	30193895	30197561	30193895	30197561	+	transcript3379.chr16.nic@SLX1A	transcript3379.chr16.nic	protein_coding	30193895,30196974,30197270,30197437	30195227,30197101,30197357,30197561	Gene ID= ENSG00000132207.17 TPM= 5.25 Transcript Type= NA
chr16	30193917	30197561	30193917	30197561	+	ENST00000251303.10@SLX1A	ENST00000251303.10	protein_coding	30193917,30194740,30194886,30196974,30197270,30197437	30194272,30194791,30195227,30197101,30197357,30197561	Gene ID= ENSG00000132207.17 TPM= 41.45 Transcript Type= protein_coding
chr16	30193887	30197531	30193887	30197531	+	ENST00000565081.1@SLX1A	ENST00000565081.1	protein_coding	30193887,30194886,30196974,30197270,30197437	30194791,30195227,30197101,30197357,30197531	Gene ID= ENSG00000132207.17 TPM= 15.18 Transcript Type= retained_intron
chr16	30193892	30204310	30193892	30204310	+	ENST00000568997.5@SLX1A-SULT1A3	ENST00000568997.5	processed_transcript	30193892,30196974,30197270,30200725,30200981,30201196,30202690,30202912,30203505,30203808	30195227,30197101,30197357,30200876,30201106,30201293,30202816,30203006,30203685,30204310	Gene ID= ENSG00000213599.10 TPM= 6.04 Transcript Type= retained_intron
chr16	30193938	30204310	30193938	30204310	+	transcript3366.chr16.nic@SLX1A-SULT1A3	transcript3366.chr16.nic	processed_transcript	30193938,30196974,30197270,30200725,30200981,30201196,30202690,30202912,30203505,30203808	30194791,30197101,30197357,30200876,30201106,30201293,30202816,30203006,30203685,30204310	Gene ID= ENSG00000213599.10 TPM= 4.87 Transcript Type= NA
chr16	30195790	30204008	30195790	30204008	+	ENST00000566712.2@SLX1A-SULT1A3	ENST00000566712.2	processed_transcript	30195790,30197270,30200725,30200981,30201196,30202690,30202912,30203505,30203808	30197101,30197357,30200876,30201106,30201293,30202816,30203006,30203685,30204008	Gene ID= ENSG00000213599.10 TPM= 8.56 Transcript Type= retained_intron
chr16	30199231	30204028	30199231	30204028	+	ENST00000338971.9@SULT1A3	ENST00000338971.9	protein_coding	30199231,30200725,30200981,30201196,30202690,30202912,30203505,30203808	30199327,30200876,30201106,30201293,30202816,30203006,30203685,30204028	Gene ID= ENSG00000261052.5 TPM= 7.01 Transcript Type= protein_coding
chr16	30198532	30204310	30198532	30204310	+	transcript3374.chr16.nic@SULT1A3	transcript3374.chr16.nic	protein_coding	30198532,30200981,30201196,30202690,30202912,30203505,30203808	30200876,30201106,30201293,30202816,30203006,30203685,30204310	Gene ID= ENSG00000261052.5 TPM= 7.39 Transcript Type= NA
chr16	30281267	30335430	30281267	30335430	-	transcript3387.chr16.nnic@SMG1P5	transcript3387.chr16.nnic	transcribed_unprocessed_pseudogene	30334975,30305790,30305055,30301222,30299869,30298377,30294566,30294115,30293099,30291203,30288561,30286167,30285383,30281575,30281267	30335430,30305953,30305210,30301358,30299927,30298590,30294691,30294187,30293196,30291375,30288785,30286268,30285457,30281703,30281425	Gene ID= ENSG00000183604.14 TPM= 3.5 Transcript Type= NA
chr16	30350777	30355283	30350777	30355283	-	transcript3407.chr16.nic@CD2BP2	transcript3407.chr16.nic	protein_coding	30355212,30354604,30354184,30353901,30353368,30350777	30355283,30354707,30354322,30354058,30353800,30353287	Gene ID= ENSG00000169217.8 TPM= 5.84 Transcript Type= NA
chr16	30350766	30355361	30350766	30355361	-	ENST00000305596.7@CD2BP2	ENST00000305596.7	protein_coding	30355212,30354604,30354184,30353901,30353368,30353181,30350766	30355361,30354707,30354322,30354058,30353800,30353287,30353095	Gene ID= ENSG00000169217.8 TPM= 85.23 Transcript Type= protein_coding
chr16	30355904	30360754	30355904	30360754	+	transcript3418.chr16.nnic@AC106782.2	transcript3418.chr16.nnic	lincRNA	30355904,30356366	30355999,30360754	Gene ID= ENSG00000260219.2 TPM= 2.92 Transcript Type= NA
chr16	30357102	30370264	30357102	30370264	-	ENST00000409939.7@TBC1D10B	ENST00000409939.7	protein_coding	30369228,30365495,30365105,30364900,30359727,30359538,30359172,30358663,30357102	30370264,30365594,30365212,30365006,30359841,30359603,30359361,30358817,30358573	Gene ID= ENSG00000169221.13 TPM= 44.95 Transcript Type= protein_coding
chr16	30377563	30377991	30377563	30377991	+	ENST00000563728.1@MYLPF	ENST00000563728.1	protein_coding	30377563,30377796	30377702,30377991	Gene ID= ENSG00000180209.11 TPM= 2.34 Transcript Type= retained_intron
chr16	30395112	30400107	30395112	30400107	+	ENST00000613509.1@ZNF48	ENST00000613509.1	protein_coding	30395112,30395780,30397330	30395578,30395873,30400107	Gene ID= ENSG00000180035.12 TPM= 11.09 Transcript Type= protein_coding
chr16	30395419	30400108	30395419	30400108	+	ENST00000320159.2@ZNF48	ENST00000320159.2	protein_coding	30395419,30397330	30395873,30400108	Gene ID= ENSG00000180035.12 TPM= 4.09 Transcript Type= protein_coding
chr16	30423619	30430075	30423619	30430075	-	ENST00000319285.4@DCTPP1	ENST00000319285.4	protein_coding	30429880,30429057,30423619	30430075,30429167,30424533	Gene ID= ENSG00000179958.8 TPM= 53.71 Transcript Type= protein_coding
chr16	30424034	30429992	30424034	30429992	-	ENST00000565758.1@DCTPP1	ENST00000565758.1	protein_coding	30429855,30429057,30424034	30429992,30429167,30424533	Gene ID= ENSG00000179958.8 TPM= 1.17 Transcript Type= protein_coding
chr16	30443631	30446181	30443631	30446181	-	ENST00000478753.4@SEPHS2	ENST00000478753.4	protein_coding	30443631	30446181	Gene ID= ENSG00000179918.18 TPM= 220.68 Transcript Type= protein_coding
chr16	30472658	30523185	30472658	30523185	+	ENST00000356798.10@ITGAL	ENST00000356798.10	protein_coding	30472658,30474196,30475306,30475513,30479091,30479331,30481439,30483827,30484113,30489082,30489254,30494212,30494713,30496097,30496436,30499074,30499338,30504175,30505244,30505389,30506715,30510361,30510881,30511050,30513771,30516973,30517649,30517797,30518624,30519857,30521492	30472898,30474298,30475400,30475580,30479208,30479461,30481584,30483959,30484263,30489155,30489386,30494363,30494850,30496294,30496566,30499234,30499489,30504264,30505300,30505462,30506856,30510471,30510960,30511136,30513846,30517086,30517705,30517895,30518719,30519967,30523185	Gene ID= ENSG00000005844.17 TPM= 46.7 Transcript Type= protein_coding
chr16	30524001	30526589	30524001	30526589	-	ENST00000380412.6@ZNF768	ENST00000380412.6	protein_coding	30526326,30524001	30526589,30526051	Gene ID= ENSG00000169957.9 TPM= 24.52 Transcript Type= protein_coding
chr16	30530367	30534918	30530367	30534918	-	ENST00000395094.3@ZNF747	ENST00000395094.3	protein_coding	30534197,30530367	30534918,30533148	Gene ID= ENSG00000169955.7 TPM= 8.17 Transcript Type= protein_coding
chr16	30534752	30537144	30534752	30537144	+	ENST00000457283.3@AC002310.1	ENST00000457283.3	antisense_RNA	30534752,30536429	30535480,30537144	Gene ID= ENSG00000235560.3 TPM= 1.17 Transcript Type= antisense_RNA
chr16	30553764	30558498	30553764	30558498	-	ENST00000395091.2@ZNF764	ENST00000395091.2	protein_coding	30557987,30557733,30553764	30558498,30557846,30556107	Gene ID= ENSG00000169951.9 TPM= 14.01 Transcript Type= protein_coding
chr16	30569346	30572734	30569346	30572734	-	ENST00000223459.10@ZNF688	ENST00000223459.10	protein_coding	30571434,30571010,30569346	30572734,30571123,30570436	Gene ID= ENSG00000229809.8 TPM= 17.51 Transcript Type= protein_coding
chr16	30569672	30572734	30569672	30572734	-	ENST00000563276.5@ZNF688	ENST00000563276.5	protein_coding	30572122,30571010,30569672	30572734,30571123,30570436	Gene ID= ENSG00000229809.8 TPM= 7.01 Transcript Type= protein_coding
chr16	30602558	30610379	30602558	30610379	-	ENST00000287461.7@ZNF689	ENST00000287461.7	protein_coding	30609837,30609525,30602558	30610379,30609638,30605447	Gene ID= ENSG00000156853.12 TPM= 7.01 Transcript Type= protein_coding
chr16	30650867	30656440	30650867	30656440	+	ENST00000300835.8@PRR14	ENST00000300835.8	protein_coding	30650867,30651596,30651796,30652721,30652914,30653365,30654230,30654629,30655351,30655502,30655868,30656032	30651127,30651668,30651964,30652842,30653103,30653408,30654339,30655214,30655420,30655593,30655939,30656440	Gene ID= ENSG00000156858.11 TPM= 23.35 Transcript Type= protein_coding
chr16	30655141	30656408	30655141	30656408	+	ENST00000567989.1@PRR14	ENST00000567989.1	protein_coding	30655141,30655868,30656032	30655593,30655939,30656408	Gene ID= ENSG00000156858.11 TPM= 3.5 Transcript Type= retained_intron
chr16	30658431	30670814	30658431	30670814	+	ENST00000356166.10@FBRS	ENST00000356166.10	protein_coding	30658431,30660263,30661180,30661304,30662420,30662559,30664215,30664715,30665035,30665306,30665638,30666512,30666919,30667320,30667542,30668560,30668772,30669069	30659977,30660442,30661215,30661333,30662468,30662859,30664516,30664920,30665079,30665401,30665706,30666541,30666990,30667437,30667622,30668643,30668979,30670814	Gene ID= ENSG00000156860.15 TPM= 12.84 Transcript Type= protein_coding
chr16	30664457	30670810	30664457	30670810	+	ENST00000287468.5@FBRS	ENST00000287468.5	protein_coding	30664457,30664715,30665035,30665306,30665638,30666512,30666919,30667320,30667542,30668560,30668772,30669069	30664516,30664920,30665079,30665401,30665706,30666541,30666990,30667437,30667622,30668643,30668979,30670810	Gene ID= ENSG00000156860.15 TPM= 94.58 Transcript Type= protein_coding
chr16	30697703	30699019	30697703	30699019	-	transcript3492.chr16.nnic@NA	transcript3492.chr16.nnic	NA	30697703	30699019	Gene ID= novel_gene_chr16_3493 TPM= 2.34 Transcript Type= NA
chr16	30737137	30740126	30737137	30740126	+	transcript3484.chr16.nnic@SRCAP	transcript3484.chr16.nnic	protein_coding	30737137,30738036	30737955,30740126	Gene ID= ENSG00000080603.16 TPM= 16.35 Transcript Type= NA
chr16	30704067	30745169	30704067	30745169	+	ENST00000380361.7@AC106886.5	ENST00000380361.7	protein_coding	30704067,30707183,30707572,30709513,30709851,30710754,30710999,30711571,30711835,30712262,30712679,30713208,30713519,30716066,30716293,30720162,30720713,30722122,30722963,30723584,30728966,30729370,30733280,30733602,30733894,30734496,30736200,30736541,30737049,30741741,30743782	30704315,30707368,30707712,30709735,30710128,30710847,30711088,30711744,30712157,30712439,30712815,30713377,30713711,30716202,30716479,30720331,30720978,30722286,30723229,30725082,30729231,30729572,30733449,30733798,30734008,30734615,30736394,30736624,30740707,30741908,30745169	Gene ID= ENSG00000282034.1 TPM= 31.53 Transcript Type= nonsense_mediated_decay
chr16	30714509	30714956	30714509	30714956	-	transcript3488.chr16.nnic@NA	transcript3488.chr16.nnic	NA	30714509	30714956	Gene ID= novel_gene_chr16_3489 TPM= 3.5 Transcript Type= NA
chr16	30718477	30723101	30718477	30723101	-	transcript3490.chr16.nnic@NA	transcript3490.chr16.nnic	NA	30718477	30723101	Gene ID= novel_gene_chr16_3491 TPM= 11.68 Transcript Type= NA
chr16	30748443	30757334	30748443	30757334	+	ENST00000563913.5@PHKG2	ENST00000563913.5	protein_coding	30748443,30748803,30751106,30753232,30753394,30756182,30756367,30756590,30756804	30748490,30748915,30751603,30753297,30753557,30756272,30756520,30756715,30757334	Gene ID= ENSG00000156873.15 TPM= 8.17 Transcript Type= retained_intron
chr16	30748440	30757331	30748440	30757331	+	ENST00000328273.11@PHKG2	ENST00000328273.11	protein_coding	30748440,30748803,30751106,30751549,30753232,30753394,30756182,30756355,30756590,30756804	30748490,30748915,30751281,30751603,30753297,30753557,30756272,30756520,30756715,30757331	Gene ID= ENSG00000156873.15 TPM= 23.35 Transcript Type= protein_coding
chr16	30757424	30761983	30757424	30761983	-	ENST00000544643.5@CCDC189	ENST00000544643.5	protein_coding	30761198,30760284,30759654,30759342,30759178,30757424	30761983,30760668,30759724,30759557,30759247,30757654	Gene ID= ENSG00000196118.11 TPM= 1.17 Transcript Type= retained_intron
chr16	30762309	30775215	30762309	30775215	+	transcript3497.chr16.nic@RNF40	transcript3497.chr16.nic	protein_coding	30762309,30762475,30763118,30763418,30764179,30764938,30765181,30765425,30766163,30766379,30766741,30767894,30768103,30768619,30768838,30769186,30769475,30771833,30772089,30773938	30762398,30762677,30763285,30763559,30764385,30765059,30765327,30765499,30766282,30766558,30766876,30768015,30768530,30768736,30768987,30769398,30769600,30771973,30772190,30775215	Gene ID= ENSG00000103549.21 TPM= 59.55 Transcript Type= NA
chr16	30778449	30787202	30778449	30787202	-	ENST00000262525.5@ZNF629	ENST00000262525.5	protein_coding	30787028,30784410,30778449	30787202,30784515,30784254	Gene ID= ENSG00000102870.5 TPM= 26.85 Transcript Type= protein_coding
chr16	30833626	30894302	30833626	30894302	-	ENST00000380317.8@BCL7C	ENST00000380317.8	protein_coding	30893853,30893212,30892840,30892586,30888860,30833626	30894302,30893290,30892948,30892747,30888945,30835148	Gene ID= ENSG00000099385.11 TPM= 1.75 Transcript Type= protein_coding
chr16	30887795	30894960	30887795	30894960	-	ENST00000215115.4@BCL7C	ENST00000215115.4	protein_coding	30893853,30893212,30892840,30892586,30888860,30887795	30894960,30893290,30892948,30892747,30888945,30887990	Gene ID= ENSG00000099385.11 TPM= 75.31 Transcript Type= protein_coding
chr16	30896610	30903547	30896610	30903547	+	transcript3523.chr16.nnic@CTF1	transcript3523.chr16.nnic	protein_coding	30896610,30899307,30902078	30896668,30899533,30903547	Gene ID= ENSG00000150281.6 TPM= 13.43 Transcript Type= NA
chr16	30896607	30903560	30896607	30903560	+	ENST00000279804.2@CTF1	ENST00000279804.2	protein_coding	30896607,30899415,30902078	30896668,30899533,30903560	Gene ID= ENSG00000150281.6 TPM= 13.43 Transcript Type= protein_coding
chr16	30949063	30956511	30949063	30956511	+	transcript3525.chr16.nic@AC135048.1	transcript3525.chr16.nic	processed_transcript	30949063,30953185,30956200	30949517,30953460,30956511	Gene ID= ENSG00000261487.1 TPM= 10.51 Transcript Type= NA
chr16	30949066	30954938	30949066	30954938	+	ENST00000318663.4@ORAI3	ENST00000318663.4	protein_coding	30949066,30953185	30949517,30954938	Gene ID= ENSG00000175938.6 TPM= 82.9 Transcript Type= protein_coding
chr16	30957294	30984664	30957294	30984664	+	ENST00000262519.13@SETD1A	ENST00000262519.13	protein_coding	30957294,30958717,30959091,30961267,30963433,30964094,30964612,30965601,30966884,30967501,30969305,30969602,30971378,30979145,30980485,30980739,30981061,30983635,30983850	30957964,30958881,30959186,30961537,30963554,30964323,30965461,30966386,30967060,30967588,30969462,30969689,30971719,30980194,30980657,30980849,30981180,30983772,30984664	Gene ID= ENSG00000099381.17 TPM= 11.68 Transcript Type= protein_coding
chr16	30985164	30989152	30985164	30989152	+	transcript3527.chr16.nnic@HSD3B7	transcript3527.chr16.nnic	protein_coding	30985164,30985484,30986049,30986423,30986605,30986840,30987768	30985297,30985824,30986204,30986531,30986704,30987002,30989152	Gene ID= ENSG00000099377.13 TPM= 16.35 Transcript Type= NA
chr16	30984573	30989152	30984573	30989152	+	transcript3531.chr16.nic@HSD3B7	transcript3531.chr16.nic	protein_coding	30984573,30986049,30986423,30986605,30986840,30987768	30985824,30986204,30986531,30986704,30987002,30989152	Gene ID= ENSG00000099377.13 TPM= 4.67 Transcript Type= NA
chr16	30985187	30989146	30985187	30989146	+	transcript3532.chr16.nic@HSD3B7	transcript3532.chr16.nic	protein_coding	30985187,30985653,30986049,30986423,30986605,30987768	30985297,30985824,30986204,30986531,30986704,30989146	Gene ID= ENSG00000099377.13 TPM= 5.84 Transcript Type= NA
chr16	30985211	30989152	30985211	30989152	+	ENST00000297679.9@HSD3B7	ENST00000297679.9	protein_coding	30985211,30985653,30986049,30986423,30986605,30986840,30987768	30985297,30985824,30986204,30986531,30986704,30987002,30989152	Gene ID= ENSG00000099377.13 TPM= 46.7 Transcript Type= protein_coding
chr16	31033555	31042975	31033555	31042975	+	transcript3540.chr16.nnic@STX4	transcript3540.chr16.nnic	protein_coding	31033555,31034013,31034226,31034462,31034970,31037926,31038114,31038510,31039541,31039723,31039912,31041891,31042142	31033835,31034114,31034325,31034536,31035040,31038034,31038190,31038647,31039651,31039818,31041141,31042027,31042975	Gene ID= ENSG00000103496.14 TPM= 2.34 Transcript Type= NA
chr16	31033582	31042975	31033582	31042975	+	transcript3541.chr16.nic@STX4	transcript3541.chr16.nic	protein_coding	31033582,31034013,31034226,31034462,31034970,31037926,31038114,31038510,31039541,31039723,31039912,31042142	31033835,31034114,31034325,31034536,31035040,31038034,31038190,31038647,31039651,31039818,31042027,31042975	Gene ID= ENSG00000103496.14 TPM= 3.5 Transcript Type= NA
chr16	31033527	31040168	31033527	31040168	+	transcript3543.chr16.nic@STX4	transcript3543.chr16.nic	protein_coding	31033527,31034013,31034204,31034462,31034970,31037926,31038114,31038510,31039541,31039723,31039912	31033835,31034114,31034325,31034536,31035040,31038034,31038190,31038647,31039651,31039818,31040168	Gene ID= ENSG00000103496.14 TPM= 6.62 Transcript Type= NA
chr16	31033550	31040168	31033550	31040168	+	transcript3546.chr16.nic@STX4	transcript3546.chr16.nic	protein_coding	31033550,31034013,31034226,31034970,31037926,31038114,31038510,31039541,31039723,31039912	31033835,31034114,31034536,31035040,31038034,31038190,31038647,31039651,31039818,31040168	Gene ID= ENSG00000103496.14 TPM= 10.12 Transcript Type= NA
chr16	31041710	31043831	31041710	31043831	+	transcript3552.chr16.nic@STX4	transcript3552.chr16.nic	protein_coding	31041710,31042142	31042027,31043831	Gene ID= ENSG00000103496.14 TPM= 2.34 Transcript Type= NA
chr16	31033491	31040168	31033491	31040168	+	ENST00000313843.7@STX4	ENST00000313843.7	protein_coding	31033491,31034013,31034226,31034462,31034970,31037926,31038114,31038510,31039541,31039723,31039912	31033835,31034114,31034325,31034536,31035040,31038034,31038190,31038647,31039651,31039818,31040168	Gene ID= ENSG00000103496.14 TPM= 48.65 Transcript Type= protein_coding
chr16	31033588	31034877	31033588	31034877	+	ENST00000461455.5@STX4	ENST00000461455.5	protein_coding	31033588,31034013,31034226	31033835,31034114,31034877	Gene ID= ENSG00000103496.14 TPM= 2.34 Transcript Type= retained_intron
chr16	31033606	31034853	31033606	31034853	+	ENST00000565483.1@STX4	ENST00000565483.1	protein_coding	31033606,31034013,31034204,31034462	31033835,31034114,31034325,31034853	Gene ID= ENSG00000103496.14 TPM= 3.5 Transcript Type= retained_intron
chr16	31060843	31065088	31060843	31065088	-	ENST00000535577.5@ZNF668	ENST00000535577.5	protein_coding	31064800,31063813,31060843	31065088,31064481,31062280	Gene ID= ENSG00000167394.12 TPM= 9.34 Transcript Type= protein_coding
chr16	31060850	31074320	31060850	31074320	-	ENST00000300849.4@ZNF668	ENST00000300849.4	protein_coding	31073659,31063813,31060850	31074320,31064481,31062280	Gene ID= ENSG00000167394.12 TPM= 30.36 Transcript Type= protein_coding
chr16	31079947	31083507	31079947	31083507	+	transcript3569.chr16.nnic@NA	transcript3569.chr16.nnic	NA	31079947	31083507	Gene ID= novel_gene_chr16_3570 TPM= 8.17 Transcript Type= NA
chr16	31083439	31094761	31083439	31094761	-	transcript3554.chr16.nnic@AC135050.2	transcript3554.chr16.nnic	protein_coding	31094557,31093312,31087806,31087537,31086633,31086337,31085964,31085110,31084780,31084558,31083439	31094761,31093421,31087826,31087699,31086898,31086491,31086183,31085260,31085024,31084703,31083809	Gene ID= ENSG00000255439.6 TPM= 3.5 Transcript Type= NA
chr16	31090842	31094957	31090842	31094957	-	ENST00000394975.2@VKORC1	ENST00000394975.2	protein_coding	31094557,31093312,31090842	31094957,31093421,31091342	Gene ID= ENSG00000167397.14 TPM= 78.61 Transcript Type= protein_coding
chr16	31090842	31094956	31090842	31094956	-	ENST00000354895.4@VKORC1	ENST00000354895.4	protein_coding	31094557,31090842	31094956,31091342	Gene ID= ENSG00000167397.14 TPM= 16.73 Transcript Type= protein_coding
chr16	31090842	31094940	31090842	31094940	-	ENST00000319788.11@VKORC1	ENST00000319788.11	protein_coding	31094557,31093312,31092783,31090842	31094940,31093421,31092864,31091342	Gene ID= ENSG00000167397.14 TPM= 3.89 Transcript Type= protein_coding
chr16	31108294	31112791	31108294	31112791	+	ENST00000219794.10@BCKDK	ENST00000219794.10	protein_coding	31108294,31109047,31109511,31109673,31110077,31110205,31110401,31110688,31111091,31111300,31111869,31112121	31108479,31109418,31109579,31109783,31110124,31110324,31110499,31110761,31111219,31111389,31112027,31112791	Gene ID= ENSG00000103507.13 TPM= 94.58 Transcript Type= protein_coding
chr16	31108294	31112567	31108294	31112567	+	ENST00000394950.7@BCKDK	ENST00000394950.7	protein_coding	31108294,31109047,31109511,31109673,31110077,31110205,31110401,31110688,31111091,31111300,31111869	31108479,31109418,31109579,31109783,31110124,31110324,31110499,31110761,31111219,31111389,31112567	Gene ID= ENSG00000103507.13 TPM= 41.45 Transcript Type= protein_coding
chr16	31129911	31131359	31129911	31131359	+	transcript3589.chr16.nic@KAT8	transcript3589.chr16.nic	protein_coding	31129911,31130267,31130456,31130746,31131195	31130157,31130360,31130606,31130900,31131359	Gene ID= ENSG00000103510.19 TPM= 5.84 Transcript Type= NA
chr16	31118881	31122320	31118881	31122320	+	transcript3593.chr16.nic@KAT8	transcript3593.chr16.nic	protein_coding	31118881,31120339	31120260,31122320	Gene ID= ENSG00000103510.19 TPM= 14.59 Transcript Type= NA
chr16	31117664	31131389	31117664	31131389	+	ENST00000219797.8@KAT8	ENST00000219797.8	protein_coding	31117664,31120186,31120339,31127035,31127189,31128050,31130017,31130267,31130456,31130746,31131195	31117892,31120260,31120514,31127088,31127353,31128139,31130157,31130360,31130606,31130900,31131389	Gene ID= ENSG00000103510.19 TPM= 35.03 Transcript Type= protein_coding
chr16	31117664	31131359	31117664	31131359	+	ENST00000448516.6@KAT8	ENST00000448516.6	protein_coding	31117664,31120186,31120339,31127035,31127189,31128050,31130017,31130267,31130456,31130746	31117892,31120260,31120514,31127088,31127353,31128139,31130157,31130360,31130606,31131359	Gene ID= ENSG00000103510.19 TPM= 5.84 Transcript Type= protein_coding
chr16	31131433	31135762	31131433	31135762	-	ENST00000317508.10@PRSS8	ENST00000317508.10	protein_coding	31135414,31135154,31133226,31132682,31132429,31131433	31135762,31135171,31133388,31132953,31132595,31132335	Gene ID= ENSG00000052344.15 TPM= 216 Transcript Type= protein_coding
chr16	31180110	31194871	31180110	31194871	+	ENST00000254108.11@FUS	ENST00000254108.11	protein_coding	31180110,31182398,31182513,31183858,31184209,31184939,31186802,31188325,31189123,31189665,31190040,31190275,31190742,31190963,31191399	31180227,31182422,31182664,31184002,31184396,31185179,31186836,31188357,31189226,31189794,31190141,31190398,31190842,31191110,31194871	Gene ID= ENSG00000089280.18 TPM= 42.03 Transcript Type= protein_coding
chr16	31180139	31191602	31180139	31191602	+	ENST00000380244.7@FUS	ENST00000380244.7	protein_coding	31180139,31182398,31182513,31183861,31184209,31184939,31186802,31188325,31189123,31189665,31190040,31190275,31190742,31190963,31191399	31180227,31182422,31182664,31184002,31184396,31185179,31186836,31188357,31189226,31189794,31190141,31190398,31190842,31191110,31191602	Gene ID= ENSG00000089280.18 TPM= 28.31 Transcript Type= protein_coding
chr16	31180138	31191602	31180138	31191602	+	ENST00000566605.5@FUS	ENST00000566605.5	protein_coding	31180138,31182398,31182513,31183858,31184209,31184939,31188325,31189123,31189665,31190040,31190275,31190742,31190963,31191399	31180227,31182422,31182664,31184002,31184396,31185179,31188357,31189226,31189794,31190141,31190398,31190842,31191110,31191602	Gene ID= ENSG00000089280.18 TPM= 2.63 Transcript Type= nonsense_mediated_decay
chr16	31180135	31191605	31180135	31191605	+	transcript3613.chr16.nic@FUS	transcript3613.chr16.nic	protein_coding	31180135,31182398,31182513,31183861,31184209,31184939,31189123,31189665,31190040,31190275,31190742,31190963,31191399	31180227,31182422,31182664,31184002,31184396,31188357,31189226,31189794,31190141,31190398,31190842,31191110,31191605	Gene ID= ENSG00000089280.18 TPM= 2.63 Transcript Type= NA
chr16	31180150	31191602	31180150	31191602	+	ENST00000487509.6@FUS	ENST00000487509.6	protein_coding	31180150,31182398,31182513,31183858,31184209,31184939,31189123,31189665,31190040,31190275,31190742,31190963,31191399	31180227,31182422,31182664,31184002,31184396,31188357,31189226,31189794,31190141,31190398,31190842,31191110,31191602	Gene ID= ENSG00000089280.18 TPM= 14.3 Transcript Type= retained_intron
chr16	31201485	31202992	31201485	31202992	-	ENST00000247470.9@PYCARD	ENST00000247470.9	protein_coding	31202417,31202147,31201485	31202992,31202203,31201841	Gene ID= ENSG00000103490.13 TPM= 69.47 Transcript Type= protein_coding
chr16	31201486	31202756	31201486	31202756	-	ENST00000350605.4@PYCARD	ENST00000350605.4	protein_coding	31202417,31201486	31202756,31201841	Gene ID= ENSG00000103490.13 TPM= 7.59 Transcript Type= protein_coding
chr16	31201487	31202741	31201487	31202741	-	transcript3624.chr16.nnic@NA	transcript3624.chr16.nnic	NA	31201487	31202741	Gene ID= novel_gene_chr16_3625 TPM= 2.34 Transcript Type= NA
chr16	31259928	31327436	31259928	31327436	+	transcript3637.chr16.nic@ITGAM	transcript3637.chr16.nic	protein_coding	31259928,31261692,31265395,31265811,31266030,31270954,31271847,31273365,31275549,31276671,31276920,31277967,31297514,31297745,31321241,31321464,31324399,31324651,31324958,31325263,31325500,31326856	31260092,31261797,31265498,31265881,31266147,31271084,31271992,31273518,31275699,31276744,31277049,31278109,31297654,31297954,31321371,31321627,31324553,31324782,31325031,31325404,31325622,31327436	Gene ID= ENSG00000169896.16 TPM= 3.89 Transcript Type= NA
chr16	31259928	31327436	31259928	31327436	+	transcript3638.chr16.nic@ITGAM	transcript3638.chr16.nic	protein_coding	31259928,31261692,31265395,31265811,31266030,31270954,31271847,31273365,31275549,31276671,31276920,31277967,31297514,31297745,31321241,31321464,31324399,31324958,31325263,31325500,31326856	31260092,31261797,31265498,31265881,31266147,31271084,31271992,31273518,31275699,31276744,31277049,31278109,31297654,31297954,31321371,31321627,31324782,31325031,31325404,31325622,31327436	Gene ID= ENSG00000169896.16 TPM= 2.72 Transcript Type= NA
chr16	31259994	31332892	31259994	31332892	+	ENST00000544665.7@ITGAM	ENST00000544665.7	protein_coding	31259994,31261692,31265395,31265811,31266030,31270954,31271847,31273365,31275549,31276671,31276920,31277967,31297514,31297742,31321241,31321464,31324399,31324651,31324958,31325263,31325500,31326856,31328147,31329228,31329798,31330081,31330308,31330504,31331165,31331636	31260092,31261797,31265498,31265881,31266147,31271084,31271992,31273518,31275699,31276744,31277049,31278109,31297654,31297954,31321371,31321627,31324553,31324782,31325031,31325404,31325622,31326935,31328230,31329303,31329905,31330164,31330421,31330605,31331275,31332892	Gene ID= ENSG00000169896.16 TPM= 62.27 Transcript Type= protein_coding
chr16	31355134	31382997	31355134	31382997	+	ENST00000268296.8@ITGAX	ENST00000268296.8	protein_coding	31355134,31355893,31356625,31357031,31357253,31359700,31359920,31360310,31361063,31361836,31362075,31362611,31362935,31363165,31371084,31371334,31371630,31372378,31372597,31373249,31376799,31377000,31377182,31379568,31379757,31379982,31380266,31380523,31380897,31381803	31355291,31355998,31356728,31357101,31357364,31359830,31360065,31360463,31361213,31361909,31362204,31362753,31363075,31363374,31371214,31371497,31371784,31372509,31372670,31373390,31376915,31377079,31377265,31379646,31379864,31380065,31380379,31380624,31381007,31382997	Gene ID= ENSG00000140678.16 TPM= 28.02 Transcript Type= protein_coding
chr16	31355172	31368514	31355172	31368514	+	transcript3652.chr16.nnic@ITGAX	transcript3652.chr16.nnic	protein_coding	31355172,31355893,31356625,31357031,31357253,31359700,31359920,31360310,31361836,31362075,31362611,31362935,31363165,31368167	31355291,31355998,31356728,31357101,31357364,31359830,31360065,31361213,31361909,31362204,31362753,31363075,31363374,31368514	Gene ID= ENSG00000140678.16 TPM= 3.5 Transcript Type= NA
chr16	31355172	31358455	31355172	31358455	+	transcript3657.chr16.nic@ITGAX	transcript3657.chr16.nic	protein_coding	31355172,31355893,31356625,31357031,31357253	31355291,31355998,31356728,31357101,31358455	Gene ID= ENSG00000140678.16 TPM= 8.17 Transcript Type= NA
chr16	31456711	31459736	31456711	31459736	-	ENST00000564629.1@AC026471.1	ENST00000564629.1	antisense_RNA	31456711	31459736	Gene ID= ENSG00000260267.1 TPM= 1.17 Transcript Type= antisense_RNA
chr16	31458304	31467165	31458304	31467165	+	transcript3659.chr16.nic@ARMC5	transcript3659.chr16.nic	protein_coding	31458304,31458854,31461922,31462131,31464394,31465850,31466079	31458501,31459999,31462029,31462917,31464887,31465982,31467165	Gene ID= ENSG00000140691.16 TPM= 19.27 Transcript Type= NA
chr16	31458996	31467164	31458996	31467164	+	ENST00000268314.8@ARMC5	ENST00000268314.8	protein_coding	31458996,31461922,31462131,31464394,31465850,31466079	31459999,31462029,31462917,31464887,31465982,31467164	Gene ID= ENSG00000140691.16 TPM= 23.94 Transcript Type= protein_coding
chr16	31472059	31477958	31472059	31477958	+	ENST00000394863.7@TGFB1I1	ENST00000394863.7	protein_coding	31472059,31473441,31473682,31473835,31474152,31474350,31474563,31476012,31476481,31476862,31477310	31472201,31473556,31473734,31473977,31474239,31474455,31474757,31476185,31476562,31477010,31477958	Gene ID= ENSG00000140682.18 TPM= 130.09 Transcript Type= protein_coding
chr16	31472371	31477958	31472371	31477958	+	transcript3666.chr16.nnic@TGFB1I1	transcript3666.chr16.nnic	protein_coding	31472371,31473441,31473682,31473835,31474152,31474350,31474563,31476012,31476481,31476862,31477310	31472449,31473556,31473734,31473977,31474239,31474455,31474757,31476185,31476562,31477010,31477958	Gene ID= ENSG00000140682.18 TPM= 11 Transcript Type= NA
chr16	31472155	31477958	31472155	31477958	+	transcript3668.chr16.nic@TGFB1I1	transcript3668.chr16.nic	protein_coding	31472155,31473441,31473835,31474152,31474350,31474563,31476012,31476481,31476862,31477310	31472201,31473734,31473977,31474239,31474455,31474757,31476185,31476562,31477010,31477958	Gene ID= ENSG00000140682.18 TPM= 10.22 Transcript Type= NA
chr16	31473426	31477958	31473426	31477958	+	ENST00000567607.5@TGFB1I1	ENST00000567607.5	protein_coding	31473426,31473682,31473835,31474152,31474350,31474563,31476012,31476481,31476862,31477310	31473556,31473734,31473977,31474239,31474455,31474757,31476185,31476562,31477010,31477958	Gene ID= ENSG00000140682.18 TPM= 19.17 Transcript Type= protein_coding
chr16	31487195	31488027	31487195	31488027	-	transcript3672.chr16.nnic@NA	transcript3672.chr16.nnic	NA	31487195	31488027	Gene ID= novel_gene_chr16_3673 TPM= 8.17 Transcript Type= NA
chr16	31488020	31490769	31488020	31490769	+	ENST00000568188.1@SLC5A2	ENST00000568188.1	protein_coding	31488020,31488383,31489123	31488173,31489048,31490769	Gene ID= ENSG00000140675.12 TPM= 1.17 Transcript Type= retained_intron
chr16	31489489	31508413	31489489	31508413	-	ENST00000327237.6@C16orf58	ENST00000327237.6	protein_coding	31508074,31507764,31500686,31499493,31499302,31496849,31493866,31493603,31493467,31492978,31492197,31492009,31489489	31508413,31507878,31500731,31499525,31499407,31496950,31493936,31493787,31493524,31493048,31492340,31492086,31490932	Gene ID= ENSG00000140688.16 TPM= 98.66 Transcript Type= protein_coding
chr16	31489489	31508429	31489489	31508429	-	transcript3681.chr16.nic@C16orf58	transcript3681.chr16.nic	protein_coding	31508074,31507764,31500686,31499493,31499302,31496849,31493866,31492978,31492197,31492009,31489489	31508429,31507878,31500731,31499525,31499407,31496950,31493936,31493787,31492340,31492086,31490932	Gene ID= ENSG00000140688.16 TPM= 46.51 Transcript Type= NA
chr16	31489489	31508429	31489489	31508429	-	transcript3686.chr16.nic@C16orf58	transcript3686.chr16.nic	protein_coding	31508074,31507764,31500686,31499493,31499302,31496849,31492978,31492197,31492009,31489489	31508429,31507878,31500731,31499525,31499407,31496950,31493936,31492340,31492086,31490932	Gene ID= ENSG00000140688.16 TPM= 10.31 Transcript Type= NA
chr16	31700590	31707437	31700590	31707437	+	ENST00000254109.9@CLUHP3	ENST00000254109.9	transcribed_unprocessed_pseudogene	31700590,31701663,31702535,31703156,31704220,31705349,31705672,31705890,31706891	31700738,31701858,31702681,31703367,31704390,31705472,31705792,31706034,31707437	Gene ID= ENSG00000131797.12 TPM= 1.17 Transcript Type= processed_transcript
chr16	31709980	31715536	31709980	31715536	+	transcript3698.chr16.nnic@NA	transcript3698.chr16.nnic	NA	31709980	31715536	Gene ID= novel_gene_chr16_3699 TPM= 4.67 Transcript Type= NA
chr16	31713234	31761565	31713234	31761565	+	ENST00000316491.13@ZNF720	ENST00000316491.13	protein_coding	31713234,31722626,31723258,31753766,31759357	31713435,31722752,31723353,31753900,31761565	Gene ID= ENSG00000197302.10 TPM= 5.84 Transcript Type= protein_coding
chr16	31873766	31917298	31873766	31917298	+	transcript3700.chr16.nnic@ZNF267	transcript3700.chr16.nnic	protein_coding	31873766,31880725,31884498,31885161,31914476	31873969,31880821,31884624,31885256,31917298	Gene ID= ENSG00000185947.14 TPM= 2.92 Transcript Type= NA
chr16	31873758	31917357	31873758	31917357	+	ENST00000300870.14@ZNF267	ENST00000300870.14	protein_coding	31873758,31884498,31885161,31914476	31873969,31884624,31885256,31917357	Gene ID= ENSG00000185947.14 TPM= 16.93 Transcript Type= protein_coding
chr16	46580554	46621626	46580554	46621626	-	ENST00000303383.7@SHCBP1	ENST00000303383.7	protein_coding	46621257,46618205,46617634,46615946,46608297,46604228,46603975,46603539,46599831,46595552,46584003,46583516,46580554	46621626,46618372,46617749,46616154,46608389,46604461,46604143,46603659,46599962,46595670,46584089,46583657,46582054	Gene ID= ENSG00000171241.8 TPM= 1.17 Transcript Type= protein_coding
chr16	46622861	46624451	46622861	46624451	-	ENST00000574180.1@AC092368.3	ENST00000574180.1	lincRNA	46622861	46624451	Gene ID= ENSG00000261512.2 TPM= 32.69 Transcript Type= lincRNA
chr16	46660192	46689223	46660192	46689223	-	transcript3713.chr16.nic@VPS35	transcript3713.chr16.nic	protein_coding	46689131,46683508,46681377,46680671,46678943,46677315,46676583,46674564,46674314,46672265,46671705,46668930,46662983,46662243,46661718,46660192	46689223,46683606,46681520,46680853,46679156,46677398,46676692,46674660,46674462,46672472,46671860,46669052,46663162,46662482,46661861,46660651	Gene ID= ENSG00000069329.16 TPM= 14.01 Transcript Type= NA
chr16	46884332	46931288	46884332	46931288	+	transcript3721.chr16.nnic@GPT2	transcript3721.chr16.nnic	protein_coding	46884332,46884694,46885467,46897648,46900682,46906842,46909684,46916628,46918621,46922242,46924389,46926925,46928907	46884467,46884958,46885577,46897737,46900790,46906975,46909927,46916707,46918757,46922416,46924544,46927037,46931288	Gene ID= ENSG00000166123.13 TPM= 6.42 Transcript Type= NA
chr16	46884378	46931297	46884378	46931297	+	ENST00000340124.8@GPT2	ENST00000340124.8	protein_coding	46884378,46884694,46897648,46900682,46906842,46909684,46916628,46918621,46922242,46924389,46926925,46928907	46884467,46884958,46897737,46900790,46906975,46909927,46916707,46918757,46922416,46924544,46927037,46931297	Gene ID= ENSG00000166123.13 TPM= 9.92 Transcript Type= protein_coding
chr16	46955362	46973788	46955362	46973788	-	ENST00000317089.9@DNAJA2	ENST00000317089.9	protein_coding	46973495,46971896,46971349,46968084,46967513,46964611,46959275,46959003,46955362	46973788,46971955,46971572,46968164,46967646,46964807,46959419,46959130,46957220	Gene ID= ENSG00000069345.11 TPM= 50.21 Transcript Type= protein_coding
chr16	46956385	46973671	46956385	46973671	-	transcript3732.chr16.nnic@DNAJA2	transcript3732.chr16.nnic	protein_coding	46973495,46971349,46968084,46967513,46964611,46959275,46959003,46956385	46973671,46971572,46968164,46967646,46964807,46959419,46959130,46957220	Gene ID= ENSG00000069345.11 TPM= 4.67 Transcript Type= NA
chr16	47081793	47143973	47081793	47143973	-	transcript3744.chr16.nic@NETO2	transcript3744.chr16.nic	protein_coding	47143579,47131969,47129224,47128325,47122868,47122657,47109483,47081793	47143973,47132025,47129364,47128573,47122912,47122784,47109711,47083801	Gene ID= ENSG00000171208.9 TPM= 3.5 Transcript Type= NA
chr16	47154387	47461220	47154387	47461220	-	transcript3748.chr16.nnic@ITFG1	transcript3748.chr16.nnic	protein_coding	47460838,47459103,47454013,47452733,47451396,47428804,47376844,47375876,47365788,47313729,47311240,47260545,47258632,47237965,47218868,47162540,47161750,47158873,47154387	47461220,47459175,47454158,47452790,47451470,47428898,47376954,47375940,47365869,47313823,47311412,47260695,47258740,47238008,47218946,47162664,47161832,47158990,47155778	Gene ID= ENSG00000129636.12 TPM= 4.67 Transcript Type= NA
chr16	47154387	47461274	47154387	47461274	-	ENST00000320640.10@ITFG1	ENST00000320640.10	protein_coding	47460838,47459103,47454013,47452733,47451396,47428804,47375876,47365788,47313729,47311240,47260545,47258632,47237965,47218868,47162540,47161750,47158873,47154387	47461274,47459175,47454158,47452790,47451470,47428898,47375940,47365869,47313823,47311412,47260695,47258740,47238008,47218946,47162664,47161832,47158990,47155778	Gene ID= ENSG00000129636.12 TPM= 28.02 Transcript Type= protein_coding
chr16	47461295	47699745	47461295	47699745	+	ENST00000566044.5@PHKB	ENST00000566044.5	protein_coding	47461295,47463882,47497399,47499756,47502991,47511665,47515521,47547433,47580295,47587668,47588905,47593500,47594137,47596373,47610826,47641035,47641599,47648533,47649100,47650544,47650831,47660506,47660657,47661719,47663677,47665942,47669215,47689041,47693378,47696381,47698448,47699229	47461426,47463993,47497488,47499894,47503090,47511772,47515601,47547548,47580358,47587763,47589102,47593557,47594214,47596531,47610920,47641090,47641692,47648616,47649204,47650626,47650921,47660567,47660819,47661800,47663734,47666032,47669417,47689175,47693507,47696488,47698588,47699745	Gene ID= ENSG00000102893.15 TPM= 12.84 Transcript Type= protein_coding
chr16	47461297	47700458	47461297	47700458	+	transcript3777.chr16.nic@PHKB	transcript3777.chr16.nic	protein_coding	47461297,47463899,47497399,47499756,47502991,47511665,47515521,47547433,47580295,47587668,47588905,47593500,47594137,47596373,47610826,47641035,47641599,47648533,47649100,47650544,47650831,47660506,47660657,47661719,47663677,47665942,47669215,47689041,47693378,47696381,47698448,47699229	47461426,47463993,47497488,47499894,47503090,47511772,47515601,47547548,47580358,47587763,47589102,47593557,47594214,47596531,47610920,47641090,47641692,47648616,47649204,47650626,47650921,47660567,47660819,47661800,47663734,47666032,47669417,47689175,47693507,47696488,47698588,47700458	Gene ID= ENSG00000102893.15 TPM= 4.67 Transcript Type= NA
chr16	47461302	47700000	47461302	47700000	+	transcript3780.chr16.nnic@PHKB	transcript3780.chr16.nnic	protein_coding	47461302,47497399,47499756,47502991,47511665,47515521,47547433,47580295,47587668,47588905,47590305,47593500,47594137,47596373,47610826,47641035,47641599,47648533,47649100,47650544,47650831,47660506,47660657,47661719,47663677,47665942,47669215,47689041,47693378,47696381,47698448,47699229	47461426,47497488,47499894,47503090,47511772,47515601,47547548,47580358,47587763,47589102,47590434,47593557,47594214,47596531,47610920,47641090,47641692,47648616,47649204,47650626,47650921,47660567,47660819,47661800,47663734,47666032,47669417,47689175,47693507,47696488,47698588,47700000	Gene ID= ENSG00000102893.15 TPM= 3.5 Transcript Type= NA
chr16	47596428	47619429	47596428	47619429	+	ENST00000568439.1@PHKB	ENST00000568439.1	protein_coding	47596428,47610826,47619130	47596531,47610920,47619429	Gene ID= ENSG00000102893.15 TPM= 1.17 Transcript Type= protein_coding
chr16	48244296	48357349	48244296	48357349	+	ENST00000285737.8@LONP2	ENST00000285737.8	protein_coding	48244296,48252131,48256610,48258618,48261424,48262778,48270016,48277338,48296015,48299662,48303172,48334216,48347507,48348100,48351581	48244621,48252365,48256741,48258740,48261587,48262872,48270274,48277479,48296165,48299788,48303305,48334358,48347714,48348290,48357349	Gene ID= ENSG00000102910.13 TPM= 23.35 Transcript Type= protein_coding
chr16	48360531	48363882	48360531	48363882	-	ENST00000380006.2@SIAH1	ENST00000380006.2	protein_coding	48360531	48363882	Gene ID= ENSG00000196470.11 TPM= 1.17 Transcript Type= protein_coding
chr16	48360531	48385450	48360531	48385450	-	ENST00000394725.2@SIAH1	ENST00000394725.2	protein_coding	48385204,48360531	48385450,48362430	Gene ID= ENSG00000196470.11 TPM= 46.7 Transcript Type= protein_coding
chr16	48542504	48610225	48542504	48610225	-	transcript3835.chr16.nic@N4BP1	transcript3835.chr16.nic	protein_coding	48609775,48560754,48553539,48551386,48548007,48542504	48610225,48562444,48553669,48551482,48548114,48543261	Gene ID= ENSG00000102921.7 TPM= 2.34 Transcript Type= NA
chr16	48542492	48610225	48542492	48610225	-	transcript3838.chr16.nnic@N4BP1	transcript3838.chr16.nnic	protein_coding	48609775,48560754,48553539,48551386,48542492	48610225,48562444,48553669,48551482,48543261	Gene ID= ENSG00000102921.7 TPM= 3.5 Transcript Type= NA
chr16	48538726	48610209	48538726	48610209	-	ENST00000262384.3@N4BP1	ENST00000262384.3	protein_coding	48609775,48560754,48553539,48551386,48548007,48546147,48538726	48610209,48562444,48553669,48551482,48548114,48546254,48543261	Gene ID= ENSG00000102921.7 TPM= 31.53 Transcript Type= protein_coding
chr16	48554127	48558307	48554127	48558307	+	transcript3844.chr16.nnic@NA	transcript3844.chr16.nnic	NA	48554127	48558307	Gene ID= novel_gene_chr16_3845 TPM= 10.51 Transcript Type= NA
chr16	48608423	48614762	48608423	48614762	+	transcript3839.chr16.nnic@NA	transcript3839.chr16.nnic	NA	48608423,48609308,48613706	48608519,48609542,48614762	Gene ID= novel_gene_chr16_3840 TPM= 3.5 Transcript Type= NA
chr16	49675528	49736777	49675528	49736777	+	transcript3847.chr16.nnic@AC027348.2	transcript3847.chr16.nnic	TEC	49675528,49707488,49736734	49677084,49707555,49736777	Gene ID= ENSG00000280131.1 TPM= 2.34 Transcript Type= NA
chr16	50025222	50037085	50025222	50037085	+	transcript3850.chr16.nnic@CNEP1R1	transcript3850.chr16.nnic	protein_coding	50025222,50025651,50026396,50026699,50029725,50033397,50034102,50035417	50025340,50025701,50026467,50026876,50029798,50033506,50034156,50037085	Gene ID= ENSG00000205423.11 TPM= 3.21 Transcript Type= NA
chr16	50024410	50037088	50024410	50037088	+	ENST00000458059.7@CNEP1R1	ENST00000458059.7	protein_coding	50024410,50025651,50026396,50029725,50033397,50034102,50035417	50025340,50025701,50026467,50029798,50033506,50034156,50037088	Gene ID= ENSG00000205423.11 TPM= 23.64 Transcript Type= protein_coding
chr16	50025206	50037087	50025206	50037087	+	ENST00000427478.6@CNEP1R1	ENST00000427478.6	protein_coding	50025206,50026396,50029725,50033397,50034102,50035417	50025340,50026467,50029798,50033506,50034156,50037087	Gene ID= ENSG00000205423.11 TPM= 32.98 Transcript Type= protein_coding
chr16	50025255	50037085	50025255	50037085	+	transcript3855.chr16.nic@CNEP1R1	transcript3855.chr16.nic	protein_coding	50025255,50029725,50033397,50034102,50035417	50026467,50029798,50033506,50034156,50037085	Gene ID= ENSG00000205423.11 TPM= 4.38 Transcript Type= NA
chr16	50274131	50318132	50274131	50318132	+	transcript3873.chr16.nnic@ADCY7	transcript3873.chr16.nnic	protein_coding	50274131,50287912,50290457,50291736,50292676,50293354,50294640,50298904,50300715,50301082,50304360,50304925,50305503,50305777,50307050,50308327,50308667,50309548,50310687,50311693,50312036,50312890,50313958,50314292,50315014,50315359	50274198,50288350,50290660,50291897,50292825,50293502,50294751,50299031,50300873,50301214,50304551,50304959,50305586,50305849,50307147,50308411,50308792,50309646,50310880,50311786,50312191,50313036,50314062,50314406,50315138,50318132	Gene ID= ENSG00000121281.12 TPM= 20.43 Transcript Type= NA
chr16	50246152	50310515	50246152	50310515	+	transcript3876.chr16.nic@ADCY7	transcript3876.chr16.nic	protein_coding	50246152,50287912,50290457,50291736,50292676,50293354,50294640,50298904,50300715,50301082,50304360,50304925,50305503,50305777,50307050,50308327,50308667,50309548,50310454	50246203,50288350,50290660,50291897,50292825,50293502,50294751,50299031,50300873,50301214,50304551,50304959,50305586,50305849,50307147,50308411,50308792,50309646,50310515	Gene ID= ENSG00000121281.12 TPM= 5.25 Transcript Type= NA
chr16	50319030	50368779	50319030	50368779	-	ENST00000394689.2@BRD7	ENST00000394689.2	protein_coding	50368726,50368090,50354793,50354425,50350023,50339976,50334711,50333574,50328669,50326284,50325748,50323587,50321982,50320663,50320248,50319887,50319030	50368779,50368298,50354922,50354482,50350167,50340086,50334895,50333697,50328744,50326391,50325883,50323698,50322038,50320777,50320391,50320030,50319266	Gene ID= ENSG00000166164.15 TPM= 5.84 Transcript Type= protein_coding
chr16	50319924	50321595	50319924	50321595	+	transcript3899.chr16.nnic@NA	transcript3899.chr16.nnic	NA	50319924,50320669	50320395,50321595	Gene ID= novel_gene_chr16_3900 TPM= 2.34 Transcript Type= NA
chr16	50548330	50649249	50548330	50649249	+	ENST00000268459.5@NKD1	ENST00000268459.5	protein_coding	50548330,50548717,50549422,50608294,50621602,50625485,50630186,50630826,50632281,50633192	50548578,50548749,50549555,50608360,50621708,50625580,50630333,50630910,50632408,50649249	Gene ID= ENSG00000140807.6 TPM= 4.67 Transcript Type= protein_coding
chr16	50637963	50640840	50637963	50640840	+	transcript3907.chr16.nnic@NA	transcript3907.chr16.nnic	NA	50637963	50640840	Gene ID= novel_gene_chr16_3908 TPM= 3.5 Transcript Type= NA
chr16	50666300	50681353	50666300	50681353	-	ENST00000300590.7@SNX20	ENST00000300590.7	protein_coding	50681190,50677397,50675770,50666300	50681353,50677535,50675921,50669148	Gene ID= ENSG00000167208.14 TPM= 3.5 Transcript Type= protein_coding
chr16	50671625	50681352	50671625	50681352	-	ENST00000330943.8@SNX20	ENST00000330943.8	protein_coding	50681190,50677397,50675770,50671625	50681352,50677535,50675921,50674074	Gene ID= ENSG00000167208.14 TPM= 22.18 Transcript Type= protein_coding
chr16	50693583	50733077	50693583	50733077	+	transcript3914.chr16.nic@NOD2	transcript3914.chr16.nic	protein_coding	50693583,50699488,50707855,50710558,50716587,50716891,50719925,50722622,50723301,50725489,50729818,50731747	50693662,50699954,50707960,50712373,50716670,50716974,50720008,50722705,50723384,50725572,50729901,50733077	Gene ID= ENSG00000167207.12 TPM= 5.84 Transcript Type= NA
chr16	50742116	50796882	50742116	50796882	+	transcript3919.chr16.nnic@CYLD	transcript3919.chr16.nnic	protein_coding	50742116,50742762,50744730,50749576,50751604,50754319,50775166,50776179,50777825,50779665,50781246,50782325,50784329,50786855,50787786,50791558,50792597,50793546,50794212,50796324	50742662,50742841,50744866,50750202,50751906,50754424,50775174,50776277,50777941,50780044,50781411,50782466,50784451,50786946,50787852,50791690,50792705,50793664,50794428,50796882	Gene ID= ENSG00000083799.17 TPM= 4.67 Transcript Type= NA
chr16	50742118	50796711	50742118	50796711	+	transcript3920.chr16.nic@CYLD	transcript3920.chr16.nic	protein_coding	50742118,50742762,50744730,50749576,50751604,50754319,50775166,50776179,50777825,50779665,50781246,50782325,50784329,50786855,50787786,50791558,50792597,50793546,50794212,50796324	50742216,50742841,50744866,50750202,50751906,50754424,50775174,50776277,50777941,50780044,50781411,50782466,50784451,50786946,50787852,50791690,50792705,50793664,50794428,50796711	Gene ID= ENSG00000083799.17 TPM= 2.34 Transcript Type= NA
chr16	50742118	50796882	50742118	50796882	+	transcript3924.chr16.nic@CYLD	transcript3924.chr16.nic	protein_coding	50742118,50742762,50744730,50749576,50751604,50754319,50776179,50777825,50779665,50781246,50782325,50784329,50786855,50787786,50791558,50792597,50793546,50794212,50796324	50742216,50742841,50744866,50750202,50751906,50754424,50776277,50777941,50780044,50781411,50782466,50784451,50786946,50787852,50791690,50792705,50793664,50794428,50796882	Gene ID= ENSG00000083799.17 TPM= 10.51 Transcript Type= NA
chr16	50742120	50796882	50742120	50796882	+	ENST00000398568.6@CYLD	ENST00000398568.6	protein_coding	50742120,50742762,50749576,50751604,50754319,50776179,50777825,50779665,50781246,50782325,50784329,50786855,50787786,50791558,50792597,50793546,50794212,50796324	50742216,50742841,50750202,50751906,50754424,50776277,50777941,50780044,50781411,50782466,50784451,50786946,50787852,50791690,50792705,50793664,50794428,50796882	Gene ID= ENSG00000083799.17 TPM= 14.01 Transcript Type= protein_coding
chr16	50742050	50796881	50742050	50796881	+	ENST00000569418.5@CYLD	ENST00000569418.5	protein_coding	50742050,50742762,50749576,50751604,50754319,50776179,50777825,50779665,50781246,50782325,50784329,50786855,50787786,50791558,50792597,50793546,50794212,50796324	50742124,50742841,50750202,50751906,50754424,50776277,50777941,50780044,50781411,50782466,50784451,50786946,50787852,50791690,50792705,50793664,50794428,50796881	Gene ID= ENSG00000083799.17 TPM= 17.51 Transcript Type= protein_coding
chr16	53130921	53327451	53130921	53327451	+	ENST00000564845.5@CHD9	ENST00000564845.5	protein_coding	53130921,53155926,53209482,53222644,53226366,53227396,53227548,53228983,53231419,53231647,53235185,53238343,53242840,53245336,53245595,53247293,53249871,53254438,53255600,53262987,53267294,53267927,53273626,53274213,53285596,53286226,53287957,53291725,53292833,53296956,53303720,53306237,53307681,53308686,53314377,53314823,53318212,53321526,53324020	53131058,53157541,53209813,53222755,53226512,53227464,53227603,53229100,53231505,53231784,53235306,53238586,53243016,53245479,53245850,53247503,53250066,53254605,53255779,53263097,53267490,53268126,53273785,53274302,53285699,53286343,53288014,53291767,53293052,53297158,53304625,53306397,53307905,53308854,53314516,53315044,53318340,53321630,53327451	Gene ID= ENSG00000177200.16 TPM= 1.55 Transcript Type= protein_coding
chr16	53054991	53226387	53054991	53226387	+	transcript3957.chr16.nic@CHD9	transcript3957.chr16.nic	protein_coding	53054991,53155926,53209482,53222644,53226366	53055077,53157541,53209813,53222755,53226387	Gene ID= ENSG00000177200.16 TPM= 2.72 Transcript Type= NA
chr16	53055033	53327501	53055033	53327501	+	ENST00000447540.5@CHD9	ENST00000447540.5	protein_coding	53055033,53155926,53209482,53222644,53226366,53227396,53227548,53228983,53231419,53231647,53235185,53238343,53242840,53245336,53245595,53247293,53249871,53254438,53255600,53262987,53267294,53267927,53273626,53274213,53285596,53286226,53287957,53291725,53292833,53296956,53303720,53306237,53307681,53308686,53314377,53314823,53318212,53321526,53324020	53055077,53157541,53209813,53222755,53226512,53227464,53227603,53229100,53231505,53231784,53235306,53238586,53243016,53245479,53245850,53247503,53250066,53254605,53255779,53263097,53267490,53268126,53273785,53274302,53285699,53286343,53288014,53291767,53293052,53297158,53304625,53306397,53307953,53308854,53314516,53315044,53318340,53321630,53327501	Gene ID= ENSG00000177200.16 TPM= 3.89 Transcript Type= protein_coding
chr16	53131019	53136570	53131019	53136570	+	transcript3966.chr16.nnic@NA	transcript3966.chr16.nnic	NA	53131019	53136570	Gene ID= novel_gene_chr16_3967 TPM= 8.17 Transcript Type= NA
chr16	53361461	53365812	53361461	53365812	-	transcript3968.chr16.nnic@NA	transcript3968.chr16.nnic	NA	53361461	53365812	Gene ID= novel_gene_chr16_3969 TPM= 2.34 Transcript Type= NA
chr16	53379897	53382373	53379897	53382373	-	transcript3971.chr16.nnic@NA	transcript3971.chr16.nnic	NA	53379897	53382373	Gene ID= novel_gene_chr16_3972 TPM= 2.34 Transcript Type= NA
chr16	53434420	53491649	53434420	53491649	+	ENST00000262133.10@RBL2	ENST00000262133.10	protein_coding	53434420,53439016,53442658,53447042,53451703,53453452,53453705,53454656,53459451,53461741,53462552,53464226,53465438,53467058,53469916,53470383,53470746,53479154,53479886,53480567,53481671,53490130	53434796,53439146,53442858,53447106,53451831,53453612,53453769,53454842,53459617,53461850,53462655,53464363,53465602,53467169,53470185,53470663,53470922,53479225,53479991,53480769,53481835,53491649	Gene ID= ENSG00000103479.15 TPM= 251.73 Transcript Type= protein_coding
chr16	53491040	53503251	53491040	53503251	-	ENST00000394657.11@AKTIP	ENST00000394657.11	protein_coding	53503147,53500218,53498391,53495262,53495073,53494517,53494339,53494138,53492693,53491040	53503251,53500329,53498596,53495326,53495173,53494605,53494437,53494245,53492753,53492519	Gene ID= ENSG00000166971.16 TPM= 7.01 Transcript Type= protein_coding
chr16	53600778	53703846	53600778	53703846	-	ENST00000379925.7@RPGRIP1L	ENST00000379925.7	protein_coding	53703803,53700639,53696151,53692066,53687863,53686433,53675017,53672870,53671510,53664870,53658772,53658414,53657453,53656472,53652535,53648964,53645625,53641285,53641033,53638310,53637695,53636439,53622219,53619025,53610967,53605481,53600778	53703846,53700730,53696295,53692364,53687965,53686576,53675122,53673016,53671583,53665009,53658878,53658464,53657632,53656589,53652987,53649115,53646003,53641475,53641116,53638411,53637854,53636512,53622356,53619208,53611051,53605614,53602188	Gene ID= ENSG00000103494.12 TPM= 1.17 Transcript Type= protein_coding
chr16	53703963	54121941	53703963	54121941	+	ENST00000471389.5@FTO	ENST00000471389.5	protein_coding	53703963,53810140,53825864,53844155,53873786,53879844,53888832,53933985,54111762	53704229,53810217,53826491,53844298,53873865,53879987,53888951,53934109,54121941	Gene ID= ENSG00000140718.20 TPM= 32.69 Transcript Type= protein_coding
chr16	54283304	54286827	54283304	54286827	-	transcript4062.chr16.nic@IRX3	transcript4062.chr16.nic	protein_coding	54285784,54284497,54283304	54286827,54285613,54284312	Gene ID= ENSG00000177508.11 TPM= 14.3 Transcript Type= NA
chr16	54283304	54286754	54283304	54286754	-	transcript4064.chr16.nic@IRX3	transcript4064.chr16.nic	protein_coding	54285784,54283304	54286754,54285613	Gene ID= ENSG00000177508.11 TPM= 15.47 Transcript Type= NA
chr16	54283304	54286763	54283304	54286763	-	ENST00000329734.3@IRX3	ENST00000329734.3	protein_coding	54285784,54284497,54284246,54283304	54286763,54285613,54284312,54283740	Gene ID= ENSG00000177508.11 TPM= 138.07 Transcript Type= protein_coding
chr16	54918931	54929193	54918931	54929193	-	transcript4073.chr16.nic@CRNDE	transcript4073.chr16.nic	lincRNA	54928770,54925101,54923585,54920298,54918931	54929193,54925213,54923650,54920327,54919209	Gene ID= ENSG00000245694.9 TPM= 7.01 Transcript Type= NA
chr16	54918863	54929117	54918863	54929117	-	transcript4080.chr16.nic@CRNDE	transcript4080.chr16.nic	lincRNA	54928770,54925101,54920298,54918863	54929117,54925213,54923650,54919209	Gene ID= ENSG00000245694.9 TPM= 3.5 Transcript Type= NA
chr16	54918931	54929193	54918931	54929193	-	transcript4087.chr16.nic@CRNDE	transcript4087.chr16.nic	lincRNA	54928770,54920298,54918931	54929193,54925213,54919209	Gene ID= ENSG00000245694.9 TPM= 4.67 Transcript Type= NA
chr16	54930862	54934485	54930862	54934485	+	ENST00000394636.8@IRX5	ENST00000394636.8	protein_coding	54930862,54932498,54933077	54931447,54932903,54934485	Gene ID= ENSG00000176842.14 TPM= 9.34 Transcript Type= protein_coding
chr16	54936017	54937450	54936017	54937450	-	transcript4100.chr16.nnic@NA	transcript4100.chr16.nnic	NA	54936017	54937450	Gene ID= novel_gene_chr16_4101 TPM= 3.5 Transcript Type= NA
chr16	55323760	55330760	55323760	55330760	+	ENST00000290552.7@IRX6	ENST00000290552.7	protein_coding	55323760,55326336,55327296,55327586,55328700,55330298	55325136,55326593,55327405,55327893,55329311,55330760	Gene ID= ENSG00000159387.7 TPM= 23.55 Transcript Type= protein_coding
chr16	55324533	55330752	55324533	55330752	+	transcript4104.chr16.nnic@IRX6	transcript4104.chr16.nnic	protein_coding	55324533,55326336,55327296,55327586,55328700,55330298	55325136,55326593,55327405,55327893,55329623,55330752	Gene ID= ENSG00000159387.7 TPM= 5.25 Transcript Type= NA
chr16	55324536	55330760	55324536	55330760	+	transcript4107.chr16.nic@IRX6	transcript4107.chr16.nic	protein_coding	55324536,55326336,55327296,55327586,55330298	55325136,55326593,55327405,55329311,55330760	Gene ID= ENSG00000159387.7 TPM= 8.96 Transcript Type= NA
chr16	55324161	55330760	55324161	55330760	+	transcript4111.chr16.nic@IRX6	transcript4111.chr16.nic	protein_coding	55324161,55326336,55327296,55330298	55325136,55326593,55329311,55330760	Gene ID= ENSG00000159387.7 TPM= 10.12 Transcript Type= NA
chr16	55479018	55506237	55479018	55506237	+	transcript4122.chr16.nnic@MMP2	transcript4122.chr16.nnic	protein_coding	55479018,55479562,55482909,55484016,55485299,55485604,55488543,55489651,55491801,55493158,55496926,55498289,55502779,55505339	55479275,55479632,55483135,55484164,55485427,55485777,55488716,55489824,55491956,55493293,55497062,55498448,55502888,55506237	Gene ID= ENSG00000087245.12 TPM= 143.51 Transcript Type= NA
chr16	55508998	55586670	55508998	55586670	+	ENST00000262134.9@LPCAT2	ENST00000262134.9	protein_coding	55508998,55525508,55528377,55529835,55531914,55532824,55534443,55537578,55545735,55549277,55550949,55574631,55579109,55582914	55509352,55525647,55528594,55529947,55531974,55532882,55534477,55537632,55545817,55549402,55551102,55574729,55579244,55586670	Gene ID= ENSG00000087253.12 TPM= 15.18 Transcript Type= protein_coding
chr16	55509070	55542028	55509070	55542028	+	transcript4153.chr16.nic@LPCAT2	transcript4153.chr16.nic	protein_coding	55509070,55525508,55528377,55529835,55531914,55532824,55534443,55537578,55541838	55509352,55525647,55528594,55529947,55531974,55532882,55534477,55537632,55542028	Gene ID= ENSG00000087253.12 TPM= 2.34 Transcript Type= NA
chr16	55802854	55833337	55802854	55833337	-	ENST00000422046.6@CES1	ENST00000422046.6	protein_coding	55833004,55828767,55826151,55823550,55821368,55820372,55819535,55816924,55812903,55810927,55810517,55806333,55803529,55802854	55833337,55828971,55826295,55823683,55821521,55820479,55819639,55816962,55813043,55811007,55810664,55806464,55803601,55803232	Gene ID= ENSG00000198848.12 TPM= 239.52 Transcript Type= protein_coding
chr16	55802853	55833158	55802853	55833158	-	ENST00000360526.7@CES1	ENST00000360526.7	protein_coding	55833004,55828767,55826151,55823550,55821368,55820372,55819535,55816924,55812903,55810927,55810517,55806333,55803529,55802853	55833158,55828974,55826295,55823683,55821521,55820479,55819639,55816962,55813043,55811010,55810664,55806464,55803601,55803232	Gene ID= ENSG00000198848.12 TPM= 177.64 Transcript Type= protein_coding
chr16	56361452	56425538	56361452	56425538	-	ENST00000290649.9@AMFR	ENST00000290649.9	protein_coding	56425073,56414252,56409424,56407964,56405204,56404909,56402985,56401733,56389185,56385919,56369193,56367444,56363921,56361452	56425538,56414344,56409588,56408116,56405244,56405041,56403118,56401843,56389375,56386022,56369327,56367527,56364105,56363056	Gene ID= ENSG00000159461.14 TPM= 154.12 Transcript Type= protein_coding
chr16	56362023	56364116	56362023	56364116	-	ENST00000568325.1@AMFR	ENST00000568325.1	protein_coding	56363921,56362023	56364116,56363056	Gene ID= ENSG00000159461.14 TPM= 1.17 Transcript Type= retained_intron
chr16	56429133	56451375	56429133	56451375	-	ENST00000300291.9@NUDT21	ENST00000300291.9	protein_coding	56451087,56447789,56446626,56439657,56434754,56434331,56429133	56451375,56447989,56446689,56439746,56434829,56434445,56432733	Gene ID= ENSG00000167005.13 TPM= 110.92 Transcript Type= protein_coding
chr16	56451490	56479100	56451490	56479100	+	ENST00000566157.5@OGFOD1	ENST00000566157.5	protein_coding	56451490,56453263,56458548,56462534,56466152,56466876,56467165,56467905,56470003,56470487,56474828,56475507,56476044	56451766,56453408,56458594,56462634,56466268,56466967,56467293,56468018,56470082,56470791,56474950,56475565,56479100	Gene ID= ENSG00000087263.16 TPM= 3.5 Transcript Type= protein_coding
chr16	56470403	56520064	56470403	56520064	-	transcript4198.chr16.nic@BBS2	transcript4198.chr16.nic	protein_coding	56519746,56514453,56511159,56510859,56509957,56506120,56505950,56502673,56502317,56501353,56500854,56499778,56498437,56497743,56496967,56485590,56484761,56470403	56520064,56514680,56511284,56510921,56510034,56506224,56506036,56502808,56502456,56501497,56501025,56499907,56498568,56497880,56497079,56485738,56484867,56470614	Gene ID= ENSG00000125124.11 TPM= 3.5 Transcript Type= NA
chr16	56484385	56520283	56484385	56520283	-	ENST00000245157.9@BBS2	ENST00000245157.9	protein_coding	56519746,56514453,56511159,56510859,56509957,56506120,56505950,56502673,56502317,56501353,56500854,56499778,56498437,56497743,56496967,56485590,56484385	56520283,56514680,56511284,56510921,56510034,56506224,56506036,56502808,56502456,56501497,56501025,56499907,56498568,56497880,56497079,56485738,56484867	Gene ID= ENSG00000125124.11 TPM= 37.36 Transcript Type= protein_coding
chr16	56484385	56520087	56484385	56520087	-	ENST00000565781.5@BBS2	ENST00000565781.5	protein_coding	56519957,56514453,56511159,56510859,56509957,56506120,56505950,56498437,56497743,56496967,56485590,56484385	56520087,56514680,56511284,56510921,56510034,56506224,56506036,56502808,56497880,56497079,56485738,56484867	Gene ID= ENSG00000125124.11 TPM= 2.34 Transcript Type= retained_intron
chr16	56608690	56609497	56608690	56609497	+	ENST00000567300.1@MT2A	ENST00000567300.1	protein_coding	56608690,56608992,56609263	56608804,56609057,56609497	Gene ID= ENSG00000125148.6 TPM= 4.67 Transcript Type= processed_transcript
chr16	56608595	56609497	56608595	56609497	+	ENST00000562017.1@MT2A	ENST00000562017.1	protein_coding	56608595	56609497	Gene ID= ENSG00000125148.6 TPM= 3.5 Transcript Type= retained_intron
chr16	56608199	56609497	56608199	56609497	+	ENST00000245185.5@MT2A	ENST00000245185.5	protein_coding	56608199,56608992,56609263	56608683,56609057,56609497	Gene ID= ENSG00000125148.6 TPM= 74.73 Transcript Type= protein_coding
chr16	56617476	56618818	56617476	56618818	+	ENST00000565768.1@MT1L	ENST00000565768.1	transcribed_unitary_pseudogene	56617476,56618179,56618589	56617590,56618244,56618818	Gene ID= ENSG00000260549.1 TPM= 7.01 Transcript Type= processed_transcript
chr16	56625475	56627112	56625475	56627112	+	ENST00000306061.10@MT1E	ENST00000306061.10	protein_coding	56625475,56626466,56626880	56625879,56626531,56627112	Gene ID= ENSG00000169715.14 TPM= 35.03 Transcript Type= protein_coding
chr16	56632233	56633986	56632233	56633986	+	ENST00000379818.3@MT1M	ENST00000379818.3	protein_coding	56632233,56633340,56633751	56632759,56633405,56633986	Gene ID= ENSG00000205364.3 TPM= 14.01 Transcript Type= protein_coding
chr16	56633136	56633979	56633136	56633979	+	transcript4231.chr16.nnic@NA	transcript4231.chr16.nnic	NA	56633136	56633979	Gene ID= novel_gene_chr16_4232 TPM= 4.67 Transcript Type= NA
chr16	56657694	56659303	56657694	56659303	+	ENST00000334350.6@MT1F	ENST00000334350.6	protein_coding	56657694,56658675,56659073	56658086,56658740,56659303	Gene ID= ENSG00000198417.6 TPM= 4.67 Transcript Type= protein_coding
chr16	56666735	56668065	56666735	56668065	-	ENST00000379811.3@MT1G	ENST00000379811.3	protein_coding	56667966,56667312,56666735	56668065,56667380,56666970	Gene ID= ENSG00000125144.13 TPM= 3.5 Transcript Type= protein_coding
chr16	56669814	56671129	56669814	56671129	+	ENST00000332374.4@MT1H	ENST00000332374.4	protein_coding	56669814,56670506,56670898	56669912,56670571,56671129	Gene ID= ENSG00000205358.3 TPM= 3.5 Transcript Type= protein_coding
chr16	56682424	56684196	56682424	56684196	+	ENST00000394485.4@MT1X	ENST00000394485.4	protein_coding	56682424,56683165,56683958	56682568,56683230,56684196	Gene ID= ENSG00000187193.8 TPM= 15.76 Transcript Type= protein_coding
chr16	56682470	56684196	56682470	56684196	+	ENST00000568370.1@MT1X	ENST00000568370.1	protein_coding	56682470	56684196	Gene ID= ENSG00000187193.8 TPM= 2.34 Transcript Type= retained_intron
chr16	56682481	56684196	56682481	56684196	+	ENST00000564974.1@MT1X	ENST00000564974.1	protein_coding	56682481,56683165,56683958	56682568,56683386,56684196	Gene ID= ENSG00000187193.8 TPM= 1.75 Transcript Type= nonsense_mediated_decay
chr16	56730105	56844769	56730105	56844769	+	ENST00000308159.9@NUP93	ENST00000308159.9	protein_coding	56730105,56748234,56758538,56798476,56805504,56818664,56821504,56823707,56828977,56830528,56831842,56832295,56833215,56834128,56834370,56834734,56836601,56837608,56838952,56839521,56841705,56844499	56730211,56748426,56758655,56798538,56805632,56818738,56821593,56823846,56829109,56830685,56832007,56832388,56833406,56834254,56834442,56834778,56836717,56837726,56839069,56839604,56841833,56844769	Gene ID= ENSG00000102900.12 TPM= 65.39 Transcript Type= protein_coding
chr16	56932048	56944863	56932048	56944863	+	ENST00000439977.6@HERPUD1	ENST00000439977.6	protein_coding	56932048,56935235,56935401,56936687,56939237,56939895,56942132,56943126	56932391,56935312,56935475,56936817,56939359,56940245,56942237,56944863	Gene ID= ENSG00000051108.14 TPM= 461.2 Transcript Type= protein_coding
chr16	56932147	56943881	56932147	56943881	+	ENST00000300302.9@HERPUD1	ENST00000300302.9	protein_coding	56932147,56935235,56935404,56936687,56939237,56939895,56942132,56943126	56932391,56935312,56935475,56936817,56939359,56940245,56942237,56943881	Gene ID= ENSG00000051108.14 TPM= 458.13 Transcript Type= protein_coding
chr16	56932147	56943881	56932147	56943881	+	ENST00000344114.8@HERPUD1	ENST00000344114.8	protein_coding	56932147,56935235,56935404,56936687,56942132,56943126	56932391,56935312,56935475,56936817,56942237,56943881	Gene ID= ENSG00000051108.14 TPM= 2.57 Transcript Type= protein_coding
chr16	56932160	56943886	56932160	56943886	+	ENST00000379792.6@HERPUD1	ENST00000379792.6	protein_coding	56932160,56935235,56936687,56939237,56939895,56942132,56943126	56932391,56935312,56936817,56939359,56940245,56942237,56943886	Gene ID= ENSG00000051108.14 TPM= 3.35 Transcript Type= protein_coding
chr16	56932144	56937048	56932144	56937048	+	transcript4274.chr16.nnic@NA	transcript4274.chr16.nnic	NA	56932144	56937048	Gene ID= novel_gene_chr16_4275 TPM= 9.34 Transcript Type= NA
chr16	56961850	56983845	56961850	56983845	+	ENST00000200676.7@CETP	ENST00000200676.7	protein_coding	56961850,56963010,56969386,56969611,56969914,56971033,56971321,56971992,56973331,56975101,56978091,56981158,56981647,56982165,56983326,56983592	56962097,56963124,56969520,56969681,56970001,56971102,56971381,56972083,56973510,56975151,56978255,56981225,56981680,56982237,56983411,56983845	Gene ID= ENSG00000087237.10 TPM= 7.01 Transcript Type= protein_coding
chr16	56989498	57083524	56989498	57083524	+	ENST00000262510.10@NLRC5	ENST00000262510.10	protein_coding	56989498,57017074,57020701,57022256,57023785,57025368,57028072,57028302,57029773,57029995,57031404,57033604,57034168,57036100,57037195,57039781,57040650,57041485,57041982,57043515,57045448,57046552,57047545,57051538,57054751,57055032,57055433,57058065,57058972,57059467,57061448,57061618,57065212,57066534,57067387,57067736,57069836,57070535,57074600,57076819,57077296,57077719,57077943,57079050,57079221,57079546,57081098,57081527,57082417	56989595,57017188,57021007,57022315,57023853,57027018,57028155,57028385,57029856,57030084,57031463,57033669,57034251,57036183,57037284,57039849,57040718,57041574,57042065,57043604,57045492,57046641,57047628,57051621,57054840,57055094,57055519,57058148,57059061,57059532,57061531,57061701,57065298,57066614,57067470,57067828,57069919,57070618,57074683,57076902,57077379,57077802,57078020,57079133,57079292,57079629,57081181,57081610,57083524	Gene ID= ENSG00000140853.15 TPM= 19.85 Transcript Type= protein_coding
chr16	57092544	57147966	57092544	57147966	+	transcript4294.chr16.nnic@CPNE2	transcript4294.chr16.nnic	protein_coding	57092544,57110708,57113288,57115476,57117496,57119195,57119561,57121093,57121674,57123414,57125860,57127849,57137149,57146085,57147551	57092790,57110922,57113467,57115550,57117567,57119278,57119650,57121191,57121760,57123473,57125993,57127903,57137282,57146321,57147966	Gene ID= ENSG00000140848.16 TPM= 9.73 Transcript Type= NA
chr16	57092550	57147966	57092550	57147966	+	transcript4298.chr16.nnic@CPNE2	transcript4298.chr16.nnic	protein_coding	57092550,57113288,57115476,57117496,57119195,57119561,57121093,57121674,57123414,57125860,57127849,57134775,57137149,57146085,57147551	57092790,57113467,57115550,57117567,57119278,57119650,57121191,57121760,57123473,57125993,57127903,57134826,57137282,57146321,57147966	Gene ID= ENSG00000140848.16 TPM= 12.06 Transcript Type= NA
chr16	57140896	57144586	57140896	57144586	-	ENST00000623921.1@AC009090.4	ENST00000623921.1	TEC	57140896	57144586	Gene ID= ENSG00000279019.1 TPM= 45.54 Transcript Type= TEC
chr16	57153533	57186060	57153533	57186060	-	transcript4304.chr16.nnic@FAM192A	transcript4304.chr16.nnic	protein_coding	57186031,57174620,57173728,57172776,57172251,57167093,57164001,57153533	57186060,57174688,57173869,57172874,57172372,57167226,57164065,57154507	Gene ID= ENSG00000172775.16 TPM= 3.5 Transcript Type= NA
chr16	57152466	57186064	57152466	57186064	-	ENST00000309137.12@FAM192A	ENST00000309137.12	protein_coding	57185821,57173728,57172776,57172251,57167093,57164001,57152466	57186064,57173869,57172874,57172372,57167226,57164065,57154507	Gene ID= ENSG00000172775.16 TPM= 12.84 Transcript Type= protein_coding
chr16	57153736	57186061	57153736	57186061	-	transcript4314.chr16.nic@FAM192A	transcript4314.chr16.nic	protein_coding	57185545,57173728,57172776,57172251,57167093,57164001,57153736	57186061,57173869,57172874,57172372,57167226,57164065,57154507	Gene ID= ENSG00000172775.16 TPM= 2.34 Transcript Type= NA
chr16	57154200	57186040	57154200	57186040	-	ENST00000567439.5@FAM192A	ENST00000567439.5	protein_coding	57185825,57173728,57172776,57172251,57167093,57164001,57154200	57186040,57173869,57172874,57172372,57167226,57164065,57154507	Gene ID= ENSG00000172775.16 TPM= 1.17 Transcript Type= protein_coding
chr16	57186301	57239046	57186301	57239046	+	transcript4321.chr16.nic@RSPRY1	transcript4321.chr16.nic	protein_coding	57186301,57204504,57208058,57209075,57212972,57213888,57216107,57216904,57220732,57221272,57227342,57230711,57231167,57235124,57238879	57186785,57205008,57208110,57209187,57213098,57213946,57216173,57217035,57220847,57221415,57227453,57230813,57231319,57235228,57239046	Gene ID= ENSG00000159579.13 TPM= 7.01 Transcript Type= NA
chr16	57186291	57240475	57186291	57240475	+	ENST00000394420.8@RSPRY1	ENST00000394420.8	protein_coding	57186291,57204504,57208058,57209075,57212972,57213888,57216107,57216904,57220732,57221272,57227342,57230711,57231167,57235124,57238879	57186451,57205008,57208110,57209187,57213098,57213946,57216173,57217035,57220847,57221415,57227453,57230813,57231319,57235228,57240475	Gene ID= ENSG00000159579.13 TPM= 53.71 Transcript Type= protein_coding
chr16	57186333	57239957	57186333	57239957	+	ENST00000537866.5@RSPRY1	ENST00000537866.5	protein_coding	57186333,57204504,57208058,57209075,57212972,57213888,57216107,57216904,57220732,57221272,57227342,57230711,57231167,57235124,57238879	57187050,57205008,57208110,57209187,57213098,57213946,57216173,57217035,57220847,57221415,57227453,57230813,57231319,57235228,57239957	Gene ID= ENSG00000159579.13 TPM= 1.17 Transcript Type= protein_coding
chr16	57245157	57253596	57245157	57253596	+	transcript4343.chr16.nnic@ARL2BP	transcript4343.chr16.nnic	protein_coding	57245157,57246080,57248537,57249767,57252313	57245405,57246141,57248643,57249852,57253596	Gene ID= ENSG00000102931.7 TPM= 4.67 Transcript Type= NA
chr16	57245098	57253635	57245098	57253635	+	ENST00000219204.7@ARL2BP	ENST00000219204.7	protein_coding	57245098,57246080,57248537,57249767,57250411,57252166	57245405,57246141,57248643,57249852,57250507,57253635	Gene ID= ENSG00000102931.7 TPM= 106.25 Transcript Type= protein_coding
chr16	57256097	57284687	57256097	57284687	-	ENST00000219207.9@PLLP	ENST00000219207.9	protein_coding	57284406,57261897,57258462,57256097	57284687,57262070,57258584,57257029	Gene ID= ENSG00000102934.9 TPM= 205.5 Transcript Type= protein_coding
chr16	57276452	57279690	57276452	57279690	+	transcript4351.chr16.nnic@NA	transcript4351.chr16.nnic	NA	57276452	57279690	Gene ID= novel_gene_chr16_4352 TPM= 7.01 Transcript Type= NA
chr16	57358772	57366190	57358772	57366190	+	ENST00000219235.4@CCL22	ENST00000219235.4	protein_coding	57358772,57360437,57363504	57358889,57360560,57366190	Gene ID= ENSG00000102962.4 TPM= 10.51 Transcript Type= protein_coding
chr16	57372458	57385048	57372458	57385048	+	ENST00000006053.6@CX3CL1	ENST00000006053.6	protein_coding	57372458,57379634,57382030	57372638,57379754,57385048	Gene ID= ENSG00000006210.6 TPM= 168.13 Transcript Type= protein_coding
chr16	57413869	57416062	57413869	57416062	+	ENST00000616880.1@CCL17	ENST00000616880.1	protein_coding	57413869,57415081,57415765	57414002,57415198,57416062	Gene ID= ENSG00000102970.10 TPM= 7.01 Transcript Type= protein_coding
chr16	57428187	57447419	57428187	57447419	-	ENST00000567518.5@CIAPIN1	ENST00000567518.5	protein_coding	57447342,57440772,57439182,57436656,57434044,57432487,57431151,57430258,57428187	57447419,57440983,57439295,57436732,57434212,57432560,57431266,57430339,57429280	Gene ID= ENSG00000005194.14 TPM= 4.67 Transcript Type= protein_coding
chr16	57428169	57447528	57428169	57447528	-	ENST00000394391.8@CIAPIN1	ENST00000394391.8	protein_coding	57447342,57440772,57439182,57436656,57434044,57432487,57431151,57430258,57428169	57447528,57440983,57439334,57436732,57434212,57432560,57431266,57430339,57429280	Gene ID= ENSG00000005194.14 TPM= 26.85 Transcript Type= protein_coding
chr16	57447437	57461275	57447437	57461275	+	ENST00000262507.10@COQ9	ENST00000262507.10	protein_coding	57447437,57451040,57452801,57456504,57456931,57458246,57459565,57460051,57460589	57447578,57451208,57452936,57456646,57457015,57458350,57459720,57460104,57461275	Gene ID= ENSG00000088682.13 TPM= 117.93 Transcript Type= protein_coding
chr16	57447492	57461270	57447492	57461270	+	transcript4390.chr16.nic@COQ9	transcript4390.chr16.nic	protein_coding	57447492,57451040,57452801,57456504,57456931,57459565,57460051,57460589	57447578,57451208,57452936,57456646,57458350,57459720,57460104,57461270	Gene ID= ENSG00000088682.13 TPM= 3.5 Transcript Type= NA
chr16	57471958	57480403	57471958	57480403	-	transcript4382.chr16.nic@DOK4	transcript4382.chr16.nic	protein_coding	57480295,57479442,57475850,57475506,57475100,57474793,57473901,57473613,57471958	57480403,57479688,57475957,57475620,57475219,57474982,57474039,57473736,57473495	Gene ID= ENSG00000125170.10 TPM= 10.89 Transcript Type= NA
chr16	57471958	57486495	57471958	57486495	-	ENST00000340099.8@DOK4	ENST00000340099.8	protein_coding	57486305,57479442,57475850,57475506,57475100,57474793,57473901,57473613,57471958	57486495,57479688,57475957,57475620,57475219,57474982,57474039,57473736,57473495	Gene ID= ENSG00000125170.10 TPM= 86.2 Transcript Type= protein_coding
chr16	57471922	57486543	57471922	57486543	-	transcript4392.chr16.nic@DOK4	transcript4392.chr16.nic	protein_coding	57486305,57479442,57475850,57475506,57475100,57474793,57473901,57471922	57486543,57479688,57475957,57475620,57475219,57474982,57474039,57473736	Gene ID= ENSG00000125170.10 TPM= 46.12 Transcript Type= NA
chr16	57471922	57479805	57471922	57479805	-	ENST00000566936.5@DOK4	ENST00000566936.5	protein_coding	57479442,57475850,57475506,57475100,57474793,57473901,57471922	57479805,57475957,57475620,57475219,57474982,57474039,57473736	Gene ID= ENSG00000125170.10 TPM= 15.18 Transcript Type= protein_coding
chr16	57512178	57536599	57512178	57536599	-	ENST00000258214.2@CCDC102A	ENST00000258214.2	protein_coding	57536500,57528593,57525901,57521068,57518625,57518068,57516293,57515341,57512178	57536599,57529324,57526127,57521176,57518741,57518277,57516463,57515444,57512870	Gene ID= ENSG00000135736.5 TPM= 11.68 Transcript Type= protein_coding
chr16	57628605	57665025	57628605	57665025	+	ENST00000562558.5@ADGRG1	ENST00000562558.5	protein_coding	57628605,57641591,57650253,57651200,57653203,57653986,57655399,57655876,57656226,57656514,57657373,57659413,57660768,57661697,57663452	57628802,57641708,57650351,57651622,57653335,57654133,57655530,57655992,57656271,57656617,57657491,57659681,57660876,57661965,57665025	Gene ID= ENSG00000205336.11 TPM= 27.23 Transcript Type= protein_coding
chr16	57619998	57665580	57619998	57665580	+	ENST00000568909.5@ADGRG1	ENST00000568909.5	protein_coding	57619998,57650253,57651200,57653203,57653986,57655399,57655876,57656226,57656514,57657373,57659395,57660768,57661697,57663452	57620136,57650351,57651622,57653335,57654133,57655530,57655992,57656271,57656617,57657491,57659681,57660876,57661965,57665580	Gene ID= ENSG00000205336.11 TPM= 7.64 Transcript Type= protein_coding
chr16	57628507	57665032	57628507	57665032	+	ENST00000456916.5@ADGRG1	ENST00000456916.5	protein_coding	57628507,57650253,57651185,57653203,57653986,57655399,57655876,57656226,57656514,57657373,57659413,57660768,57661697,57663452	57628802,57650351,57651622,57653335,57654133,57655530,57655992,57656271,57656617,57657491,57659681,57660876,57661965,57665032	Gene ID= ENSG00000205336.11 TPM= 10.65 Transcript Type= protein_coding
chr16	57628306	57665028	57628306	57665028	+	ENST00000562631.5@ADGRG1	ENST00000562631.5	protein_coding	57628306,57650253,57651200,57653203,57653986,57655399,57655876,57656226,57656514,57657373,57659413,57660768,57661697,57663452	57628802,57650351,57651622,57653335,57654133,57655530,57655992,57656271,57656617,57657491,57659681,57660876,57661965,57665028	Gene ID= ENSG00000205336.11 TPM= 27.81 Transcript Type= protein_coding
chr16	57620077	57665028	57620077	57665028	+	ENST00000567835.5@ADGRG1	ENST00000567835.5	protein_coding	57620077,57641591,57650253,57651200,57653203,57653986,57655399,57655876,57656226,57656514,57657373,57659395,57660768,57661697,57663452	57620136,57641708,57650351,57651622,57653335,57654133,57655530,57655992,57656271,57656617,57657491,57659681,57660876,57661965,57665028	Gene ID= ENSG00000205336.11 TPM= 17.6 Transcript Type= protein_coding
chr16	57650711	57654414	57650711	57654414	-	transcript4438.chr16.nnic@NA	transcript4438.chr16.nnic	NA	57650711	57654414	Gene ID= novel_gene_chr16_4439 TPM= 9.34 Transcript Type= NA
chr16	57735721	57757250	57735721	57757250	+	transcript4466.chr16.nic@KATNB1	transcript4466.chr16.nic	protein_coding	57735721,57736978,57741687,57744394,57750827,57751261,57751641,57751940,57752530,57752778,57753077,57753389,57753945,57754930,57755119,57755345,57755790,57755992,57756356,57756814	57735855,57737283,57741817,57744511,57750927,57751302,57751724,57752055,57752601,57752928,57753267,57753519,57753995,57754997,57755238,57755494,57755917,57756066,57756472,57757250	Gene ID= ENSG00000140854.12 TPM= 15.18 Transcript Type= NA
chr16	57735721	57757250	57735721	57757250	+	transcript4478.chr16.nic@KATNB1	transcript4478.chr16.nic	protein_coding	57735721,57736978,57741687,57744394,57750827,57751261,57751641,57751940,57752530,57752778,57753077,57753389,57753945,57754930,57755119,57755345,57755841,57756356,57756814	57735855,57737283,57741817,57744511,57750927,57751302,57751724,57752055,57752601,57752928,57753267,57753519,57753995,57754997,57755238,57755494,57756066,57756472,57757250	Gene ID= ENSG00000140854.12 TPM= 4.67 Transcript Type= NA
chr16	57735730	57757250	57735730	57757250	+	ENST00000379661.7@KATNB1	ENST00000379661.7	protein_coding	57735730,57736978,57741687,57744394,57750827,57751261,57751641,57751940,57752530,57752778,57753077,57753389,57753945,57754930,57755119,57755345,57755841,57755992,57756356,57756814	57735855,57737283,57741817,57744511,57750927,57751302,57751724,57752055,57752601,57752928,57753267,57753519,57753995,57754997,57755238,57755494,57755917,57756066,57756472,57757250	Gene ID= ENSG00000140854.12 TPM= 33.86 Transcript Type= protein_coding
chr16	57758217	57802600	57758217	57802600	-	transcript4448.chr16.nnic@KIFC3	transcript4448.chr16.nnic	protein_coding	57802370,57798072,57794999,57790930,57788575,57785464,57772223,57771543,57771198,57770527,57769808,57769595,57766874,57765459,57764143,57762140,57761413,57761042,57760726,57760282,57759728,57759125,57758217	57802600,57798282,57795141,57791066,57788713,57785666,57772288,57771686,57771437,57770700,57769955,57769725,57766985,57765640,57764247,57762270,57761536,57761171,57760955,57760416,57759836,57759153,57758909	Gene ID= ENSG00000140859.15 TPM= 11.38 Transcript Type= NA
chr16	57758217	57802658	57758217	57802658	-	transcript4451.chr16.nnic@KIFC3	transcript4451.chr16.nnic	protein_coding	57802370,57798072,57794999,57788575,57785464,57772223,57771543,57771198,57770527,57769808,57769595,57766874,57765459,57764143,57762140,57761413,57761042,57760726,57760282,57759728,57759125,57758217	57802658,57798282,57795141,57788713,57785666,57772288,57771686,57771437,57770700,57769955,57769725,57766985,57765640,57764247,57762270,57761536,57761171,57760955,57760416,57759836,57759153,57758909	Gene ID= ENSG00000140859.15 TPM= 52.25 Transcript Type= NA
chr16	57758217	57802487	57758217	57802487	-	transcript4459.chr16.nic@KIFC3	transcript4459.chr16.nic	protein_coding	57802370,57798072,57794999,57785464,57772223,57771543,57771198,57770527,57769808,57769595,57766874,57765459,57764143,57762140,57761413,57761042,57760726,57760282,57759728,57759125,57758217	57802487,57798282,57795141,57785666,57772288,57771686,57771437,57770700,57769955,57769725,57766985,57765640,57764247,57762270,57761536,57761171,57760955,57760416,57759836,57759153,57758909	Gene ID= ENSG00000140859.15 TPM= 16.05 Transcript Type= NA
chr16	57758217	57802467	57758217	57802467	-	transcript4462.chr16.nic@KIFC3	transcript4462.chr16.nic	protein_coding	57802370,57798072,57794999,57790930,57772223,57771543,57771198,57770527,57769808,57769595,57766874,57765459,57764143,57762140,57761413,57761042,57760726,57760282,57759728,57759125,57758217	57802467,57798282,57795141,57791066,57772288,57771686,57771437,57770700,57769955,57769725,57766985,57765640,57764247,57762270,57761536,57761171,57760955,57760416,57759836,57759153,57758909	Gene ID= ENSG00000140859.15 TPM= 10.41 Transcript Type= NA
chr16	57758217	57802488	57758217	57802488	-	transcript4486.chr16.nnic@KIFC3	transcript4486.chr16.nnic	protein_coding	57802370,57798072,57794999,57772223,57771543,57771198,57770527,57769808,57769595,57766874,57765459,57764143,57762140,57761413,57761042,57760726,57759728,57759125,57758217	57802488,57798282,57795141,57772288,57771686,57771437,57770700,57769955,57769725,57766985,57765640,57764247,57762270,57761536,57761171,57760955,57759836,57759153,57758909	Gene ID= ENSG00000140859.15 TPM= 11.58 Transcript Type= NA
chr16	57758219	57802513	57758219	57802513	-	ENST00000445690.6@KIFC3	ENST00000445690.6	protein_coding	57802370,57798072,57794999,57772223,57771543,57771198,57770527,57769808,57769595,57766874,57765459,57764143,57762140,57761413,57761042,57760726,57760282,57759728,57759125,57758219	57802513,57798282,57795141,57772288,57771686,57771437,57770700,57769955,57769725,57766985,57765640,57764247,57762270,57761536,57761171,57760955,57760416,57759836,57759153,57758909	Gene ID= ENSG00000140859.15 TPM= 109.66 Transcript Type= protein_coding
chr16	57758217	57797764	57758217	57797764	-	ENST00000465878.6@KIFC3	ENST00000465878.6	protein_coding	57797705,57794999,57788575,57772223,57771543,57771198,57770527,57769808,57769595,57766874,57765459,57764143,57762140,57761413,57761042,57760726,57760282,57759728,57759125,57758217	57797764,57795141,57788713,57772288,57771686,57771437,57770700,57769955,57769725,57766985,57765640,57764247,57762270,57761536,57761171,57760955,57760416,57759836,57759153,57758909	Gene ID= ENSG00000140859.15 TPM= 19.76 Transcript Type= protein_coding
chr16	57985167	57987571	57985167	57987571	+	transcript4500.chr16.nic@TEPP	transcript4500.chr16.nic	protein_coding	57985167,57985482,57985909,57987396	57985267,57985546,57985941,57987571	Gene ID= ENSG00000159648.11 TPM= 7.01 Transcript Type= NA
chr16	57985181	57988116	57985181	57988116	+	ENST00000562915.1@TEPP	ENST00000562915.1	protein_coding	57985181,57985482,57985909	57985267,57985546,57988116	Gene ID= ENSG00000159648.11 TPM= 1.17 Transcript Type= retained_intron
chr16	57987439	57989517	57987439	57989517	+	transcript4509.chr16.nnic@NA	transcript4509.chr16.nnic	NA	57987439	57989517	Gene ID= novel_gene_chr16_4510 TPM= 2.34 Transcript Type= NA
chr16	57994428	57996469	57994428	57996469	-	transcript4511.chr16.nnic@NA	transcript4511.chr16.nnic	NA	57994428	57996469	Gene ID= novel_gene_chr16_4512 TPM= 2.34 Transcript Type= NA
chr16	58001373	58021618	58001373	58021618	+	ENST00000219281.7@USB1	ENST00000219281.7	protein_coding	58001373,58002479,58009929,58014273,58017334,58018972,58020141	58001581,58002645,58010112,58014326,58017439,58019055,58021618	Gene ID= ENSG00000103005.11 TPM= 88.74 Transcript Type= protein_coding
chr16	58001401	58006380	58001401	58006380	+	transcript4506.chr16.nic@USB1	transcript4506.chr16.nic	protein_coding	58001401,58002479	58001581,58006380	Gene ID= ENSG00000103005.11 TPM= 4.67 Transcript Type= NA
chr16	58025566	58046901	58025566	58046901	+	ENST00000219271.3@MMP15	ENST00000219271.3	protein_coding	58025566,58037472,58038266,58039875,58040537,58041617,58042231,58043210,58043512,58045007	58026512,58037620,58038394,58040182,58040698,58041870,58042369,58043360,58043627,58046901	Gene ID= ENSG00000102996.4 TPM= 42.03 Transcript Type= protein_coding
chr16	58113588	58129450	58113588	58129450	-	ENST00000262498.7@CFAP20	ENST00000262498.7	protein_coding	58129032,58116872,58116041,58115269,58114810,58113588	58129450,58116951,58116152,58115457,58114920,58114030	Gene ID= ENSG00000070761.7 TPM= 42.62 Transcript Type= protein_coding
chr16	58113588	58129406	58113588	58129406	-	transcript4518.chr16.nic@CFAP20	transcript4518.chr16.nic	protein_coding	58129032,58116872,58115269,58114810,58113588	58129406,58116951,58116152,58114920,58114030	Gene ID= ENSG00000070761.7 TPM= 4.09 Transcript Type= NA
chr16	58113606	58129371	58113606	58129371	-	ENST00000562622.5@CFAP20	ENST00000562622.5	protein_coding	58129032,58116872,58116041,58114810,58113606	58129371,58116951,58116152,58115457,58114030	Gene ID= ENSG00000070761.7 TPM= 1.17 Transcript Type= retained_intron
chr16	58159875	58198187	58159875	58198187	-	transcript4523.chr16.nic@CSNK2A2	transcript4523.chr16.nic	protein_coding	58197633,58196733,58186755,58184260,58174451,58168610,58167685,58167207,58166584,58165560,58159875	58198187,58196844,58186856,58184310,58174510,58168693,58167795,58167308,58166684,58165708,58164147	Gene ID= ENSG00000070770.8 TPM= 197.32 Transcript Type= NA
chr16	58157907	58197920	58157907	58197920	-	ENST00000262506.7@CSNK2A2	ENST00000262506.7	protein_coding	58197633,58196733,58186755,58184260,58174451,58168610,58167685,58167207,58166584,58165560,58164054,58157907	58197920,58196844,58186856,58184310,58174510,58168693,58167795,58167308,58166684,58165708,58164147,58158353	Gene ID= ENSG00000070770.8 TPM= 11.68 Transcript Type= protein_coding
chr16	58392394	58406144	58392394	58406144	+	ENST00000318129.5@GINS3	ENST00000318129.5	protein_coding	58392394,58403098,58404499	58392787,58403331,58406144	Gene ID= ENSG00000181938.13 TPM= 1.17 Transcript Type= protein_coding
chr16	58463681	58513415	58463681	58513415	+	transcript4542.chr16.nic@NDRG4	transcript4542.chr16.nic	protein_coding	58463681,58487756,58494964,58500988,58503798,58504154,58504359,58504589,58506387,58506558,58506912,58507808,58507948,58508962,58509154,58509301,58511422	58463797,58487850,58495008,58501077,58503903,58504274,58504421,58504649,58506473,58506614,58507015,58507864,58507999,58509009,58509189,58509352,58513415	Gene ID= ENSG00000103034.14 TPM= 3.67 Transcript Type= NA
chr16	58464024	58513619	58464024	58513619	+	ENST00000394282.8@NDRG4	ENST00000394282.8	protein_coding	58464024,58487756,58494964,58503798,58504154,58504359,58504589,58506387,58506558,58506912,58507808,58507948,58508962,58509154,58509301,58511422	58464467,58487850,58495008,58503903,58504274,58504421,58504649,58506473,58506614,58507015,58507864,58507999,58509009,58509189,58509352,58513619	Gene ID= ENSG00000103034.14 TPM= 26.43 Transcript Type= protein_coding
chr16	58465083	58513415	58465083	58513415	+	transcript4554.chr16.nic@NDRG4	transcript4554.chr16.nic	protein_coding	58465083,58487756,58494964,58503798,58504154,58504359,58504589,58506387,58506558,58506912,58507808,58507948,58508962,58509154,58509301,58511422	58465235,58487850,58495008,58503903,58504274,58504421,58504649,58506473,58506614,58507015,58507864,58507999,58509009,58509189,58509352,58513415	Gene ID= ENSG00000103034.14 TPM= 7.17 Transcript Type= NA
chr16	58510711	58513410	58510711	58513410	+	ENST00000563209.1@NDRG4	ENST00000563209.1	protein_coding	58510711	58513410	Gene ID= ENSG00000103034.14 TPM= 1.33 Transcript Type= retained_intron
chr16	58463665	58513628	58463665	58513628	+	ENST00000258187.9@NDRG4	ENST00000258187.9	protein_coding	58463665,58487756,58494964,58503798,58504154,58504359,58504589,58506387,58506558,58506912,58507808,58507948,58508962,58509154,58509301,58511422	58463797,58487850,58495008,58503903,58504274,58504421,58504649,58506473,58506614,58507015,58507864,58507999,58509009,58509189,58509352,58513628	Gene ID= ENSG00000103034.14 TPM= 32.27 Transcript Type= protein_coding
chr16	58514879	58516127	58514879	58516127	-	transcript4590.chr16.nnic@NA	transcript4590.chr16.nnic	NA	58514879	58516127	Gene ID= novel_gene_chr16_4591 TPM= 4.67 Transcript Type= NA
chr16	58515479	58519662	58515479	58519662	+	ENST00000310682.6@SETD6	ENST00000310682.6	protein_coding	58515479,58515791,58515953,58516202,58516478,58516808,58518051,58518401,58518724	58515564,58515880,58516097,58516343,58516672,58516928,58518231,58518543,58519662	Gene ID= ENSG00000103037.11 TPM= 1.17 Transcript Type= protein_coding
chr16	58515488	58519110	58515488	58519110	+	ENST00000219315.8@SETD6	ENST00000219315.8	protein_coding	58515488,58515791,58516202,58516478,58516808,58518051,58518401,58518724	58515564,58516097,58516343,58516672,58516928,58518231,58518543,58519110	Gene ID= ENSG00000103037.11 TPM= 3.5 Transcript Type= protein_coding
chr16	58519951	58629886	58519951	58629886	-	ENST00000317147.9@CNOT1	ENST00000317147.9	protein_coding	58629728,58599236,58588799,58587780,58587345,58587201,58586545,58585338,58583056,58582793,58581345,58580633,58578699,58576463,58575007,58574609,58560212,58558473,58556847,58555784,58555251,58553782,58551589,58551132,58549719,58547566,58547186,58546672,58546321,58545361,58543607,58542428,58542231,58541501,58539768,58538772,58538158,58537891,58536989,58534147,58532232,58531958,58530246,58528475,58525989,58525179,58523370,58521183,58519951	58629886,58599511,58588906,58587878,58587413,58587255,58586748,58585506,58583182,58582903,58581515,58580760,58578939,58576582,58575129,58574760,58560362,58558674,58556993,58555908,58555537,58553860,58551819,58551272,58549898,58547682,58547296,58546749,58546498,58545491,58543903,58542568,58542335,58541620,58539959,58538914,58538266,58538060,58537220,58534395,58532395,58532075,58530347,58528648,58526138,58525359,58523502,58521317,58521036	Gene ID= ENSG00000125107.17 TPM= 13.43 Transcript Type= protein_coding
chr16	58543327	58629857	58543327	58629857	-	transcript4538.chr16.nic@CNOT1	transcript4538.chr16.nic	protein_coding	58629728,58599236,58588799,58587780,58587345,58587201,58586545,58585338,58583056,58582793,58581345,58580633,58578699,58576463,58575007,58574609,58560212,58558473,58556862,58555784,58555251,58553782,58551589,58551132,58549719,58547566,58547186,58546672,58546321,58545361,58543327	58629857,58599511,58588906,58587878,58587413,58587255,58586748,58585506,58583182,58582903,58581515,58580760,58578939,58576582,58575129,58574760,58560362,58558674,58556993,58555908,58555537,58553860,58551819,58551272,58549898,58547682,58547296,58546749,58546498,58545491,58543903	Gene ID= ENSG00000125107.17 TPM= 5.84 Transcript Type= NA
chr16	58520695	58629834	58520695	58629834	-	ENST00000569240.5@CNOT1	ENST00000569240.5	protein_coding	58629728,58599236,58588799,58587780,58587345,58587201,58586545,58585338,58583056,58582793,58581345,58580633,58578699,58576463,58575007,58574609,58560212,58558473,58556862,58555784,58555251,58553782,58551589,58551132,58549719,58547566,58547186,58546672,58546321,58545361,58543607,58542428,58542231,58541501,58539768,58538772,58538158,58537891,58536989,58534147,58532232,58531958,58530246,58528475,58525989,58525179,58523370,58521183,58520695	58629834,58599511,58588906,58587878,58587413,58587255,58586748,58585506,58583182,58582903,58581515,58580760,58578939,58576582,58575129,58574760,58560362,58558674,58556993,58555908,58555537,58553860,58551819,58551272,58549898,58547682,58547296,58546749,58546498,58545491,58543903,58542568,58542335,58541620,58539959,58538914,58538266,58538060,58537220,58534395,58532395,58532075,58530347,58528648,58526138,58525359,58523502,58521317,58521036	Gene ID= ENSG00000125107.17 TPM= 16.93 Transcript Type= protein_coding
chr16	58543327	58629838	58543327	58629838	-	ENST00000441024.6@CNOT1	ENST00000441024.6	protein_coding	58629728,58599236,58588799,58587780,58587345,58587201,58586545,58585338,58583056,58582793,58581345,58580633,58578699,58576463,58575007,58574609,58560212,58558473,58556847,58555784,58555251,58553782,58551589,58551132,58549719,58547566,58547186,58546672,58546321,58545361,58543327	58629838,58599511,58588906,58587878,58587413,58587255,58586748,58585506,58583182,58582903,58581515,58580760,58578939,58576582,58575129,58574760,58560362,58558674,58556993,58555908,58555537,58553860,58551819,58551272,58549898,58547682,58547296,58546749,58546498,58545491,58543903	Gene ID= ENSG00000125107.17 TPM= 9.34 Transcript Type= protein_coding
chr16	58665109	58685104	58665109	58685104	-	ENST00000219320.8@SLC38A7	ENST00000219320.8	protein_coding	58684717,58683955,58679857,58678696,58678333,58677326,58676289,58675940,58672096,58671045,58670113,58665109	58685104,58684178,58680241,58678894,58678474,58677424,58676346,58676054,58672243,58671244,58670167,58667487	Gene ID= ENSG00000103042.8 TPM= 12.26 Transcript Type= protein_coding
chr16	58665109	58684723	58665109	58684723	-	ENST00000570101.5@SLC38A7	ENST00000570101.5	protein_coding	58683955,58679857,58678696,58678333,58677326,58676289,58675940,58672096,58671045,58670113,58665109	58684723,58680241,58678894,58678474,58677424,58676346,58676054,58672243,58671244,58670167,58667487	Gene ID= ENSG00000103042.8 TPM= 8.76 Transcript Type= protein_coding
chr16	58666372	58684751	58666372	58684751	-	transcript4566.chr16.nic@SLC38A7	transcript4566.chr16.nic	protein_coding	58684717,58683955,58679857,58678696,58678333,58677326,58675940,58672096,58671045,58670113,58666372	58684751,58684178,58680241,58678894,58678474,58677424,58676346,58672243,58671244,58670167,58667487	Gene ID= ENSG00000103042.8 TPM= 2.34 Transcript Type= NA
chr16	58707131	58734357	58707131	58734357	-	ENST00000245206.9@GOT2	ENST00000245206.9	protein_coding	58734140,58723746,58722150,58719196,58718527,58718196,58716663,58716014,58709417,58707131	58734357,58723902,58722278,58719255,58718688,58718300,58716813,58716179,58709567,58708293	Gene ID= ENSG00000125166.12 TPM= 107.42 Transcript Type= protein_coding
chr16	61055399	61055964	61055399	61055964	-	ENST00000591758.1@RPS27AP16	ENST00000591758.1	transcribed_processed_pseudogene	61055399	61055964	Gene ID= ENSG00000224631.4 TPM= 516.08 Transcript Type= processed_transcript
chr16	64943753	65122198	64943753	65122198	-	ENST00000268603.8@CDH11	ENST00000268603.8	protein_coding	65121880,65053804,65004642,64998562,64992915,64991768,64988157,64982048,64972904,64971931,64971579,64950767,64943753	65122198,65053928,65005041,64998856,64993034,64991935,64988344,64982301,64973040,64972064,64971696,64951018,64948099	Gene ID= ENSG00000140937.13 TPM= 15.18 Transcript Type= protein_coding
chr16	64946780	65123810	64946780	65123810	-	transcript4601.chr16.nic@CDH11	transcript4601.chr16.nic	protein_coding	65123674,65053804,65004642,64998562,64992915,64991768,64988157,64982048,64972904,64971931,64971579,64950767,64946780	65123810,65053928,65005041,64998856,64993034,64991935,64988344,64982301,64973040,64972064,64971696,64951018,64948099	Gene ID= ENSG00000140937.13 TPM= 11.68 Transcript Type= NA
chr16	66128442	66133717	66128442	66133717	-	transcript4619.chr16.nnic@NA	transcript4619.chr16.nnic	NA	66133515,66128442	66133717,66132031	Gene ID= novel_gene_chr16_4620 TPM= 3.5 Transcript Type= NA
chr16	66395019	66404782	66395019	66404782	+	transcript4636.chr16.nic@CDH5	transcript4636.chr16.nic	protein_coding	66395019,66397982,66398456,66400771,66402652	66396201,66398106,66398561,66401016,66404782	Gene ID= ENSG00000179776.17 TPM= 57.21 Transcript Type= NA
chr16	66366630	66404786	66366630	66404786	+	ENST00000341529.7@CDH5	ENST00000341529.7	protein_coding	66366630,66379319,66386809,66388324,66389358,66390403,66392136,66396059,66397982,66398456,66400771,66402652	66366758,66379547,66387097,66388440,66389522,66390590,66392383,66396201,66398106,66398561,66401016,66404786	Gene ID= ENSG00000179776.17 TPM= 288.4 Transcript Type= protein_coding
chr16	66552567	66566072	66552567	66566072	+	ENST00000264001.8@CKLF	ENST00000264001.8	protein_coding	66552567,66558190,66563122,66565886	66552793,66558348,66563217,66566072	Gene ID= ENSG00000217555.12 TPM= 21.02 Transcript Type= protein_coding
chr16	66552569	66566072	66552569	66566072	+	ENST00000345436.8@CKLF	ENST00000345436.8	protein_coding	66552569,66558190,66565886	66552793,66558348,66566072	Gene ID= ENSG00000217555.12 TPM= 3.5 Transcript Type= protein_coding
chr16	66552569	66566072	66552569	66566072	+	ENST00000351137.8@CKLF	ENST00000351137.8	protein_coding	66552569,66563122,66565886	66552793,66563217,66566072	Gene ID= ENSG00000217555.12 TPM= 15.18 Transcript Type= protein_coding
chr16	66586909	66588275	66586909	66588275	+	ENST00000532362.1@CMTM2	ENST00000532362.1	protein_coding	66586909,66587919	66587098,66588275	Gene ID= ENSG00000140932.9 TPM= 1.17 Transcript Type= retained_intron
chr16	66579457	66588275	66579457	66588275	+	ENST00000268595.2@CMTM2	ENST00000268595.2	protein_coding	66579457,66580026,66586997,66587919	66579892,66580184,66587098,66588275	Gene ID= ENSG00000140932.9 TPM= 1.17 Transcript Type= protein_coding
chr16	66604161	66613742	66604161	66613742	+	transcript4656.chr16.nic@CMTM3	transcript4656.chr16.nic	protein_coding	66604161,66604731,66608309,66609435,66609883,66612609	66604449,66604952,66608464,66609530,66610003,66613742	Gene ID= ENSG00000140931.19 TPM= 16.35 Transcript Type= NA
chr16	66604032	66613892	66604032	66613892	+	ENST00000424011.6@CMTM3	ENST00000424011.6	protein_coding	66604032,66604731,66608309,66609435,66609883,66612609	66604482,66604952,66608464,66609530,66610003,66613892	Gene ID= ENSG00000140931.19 TPM= 11.09 Transcript Type= protein_coding
chr16	66604276	66613892	66604276	66613892	+	ENST00000361909.8@CMTM3	ENST00000361909.8	protein_coding	66604276,66604731,66608309,66609435,66609883,66612609	66604555,66604952,66608464,66609530,66610003,66613892	Gene ID= ENSG00000140931.19 TPM= 9.92 Transcript Type= protein_coding
chr16	66604664	66613880	66604664	66613880	+	ENST00000567572.5@CMTM3	ENST00000567572.5	protein_coding	66604664,66608309,66609435,66609883,66612609	66604952,66608464,66609530,66610003,66613880	Gene ID= ENSG00000140931.19 TPM= 12.84 Transcript Type= protein_coding
chr16	66614750	66696745	66614750	66696745	-	transcript4658.chr16.nic@CMTM4	transcript4658.chr16.nic	protein_coding	66696340,66636405,66623404,66622062,66617231,66614750	66696745,66636581,66623502,66622222,66617358,66616715	Gene ID= ENSG00000183723.12 TPM= 8.17 Transcript Type= NA
chr16	66614750	66621775	66614750	66621775	-	ENST00000581487.1@CMTM4	ENST00000581487.1	protein_coding	66614750	66621775	Gene ID= ENSG00000183723.12 TPM= 8.17 Transcript Type= retained_intron
chr16	66723585	66751596	66723585	66751596	-	transcript4692.chr16.nic@DYNC1LI2	transcript4692.chr16.nic	protein_coding	66751485,66751273,66749197,66742438,66736075,66732339,66730112,66729040,66728201,66727688,66725828,66723585	66751596,66751346,66749313,66742668,66736244,66734311,66730223,66729099,66728242,66727805,66725944,66723822	Gene ID= ENSG00000135720.12 TPM= 3.5 Transcript Type= NA
chr16	66720893	66751798	66720893	66751798	-	ENST00000258198.6@DYNC1LI2	ENST00000258198.6	protein_coding	66751485,66751273,66749197,66742438,66736075,66734218,66732339,66730112,66729040,66728201,66727688,66725828,66720893	66751798,66751346,66749313,66742668,66736244,66734311,66732474,66730223,66729099,66728242,66727805,66725944,66723822	Gene ID= ENSG00000135720.12 TPM= 103.92 Transcript Type= protein_coding
chr16	66802880	66830976	66802880	66830976	-	ENST00000379463.6@NAE1	ENST00000379463.6	protein_coding	66830847,66827980,66826677,66826523,66824855,66823529,66823227,66821450,66818528,66817425,66816965,66816581,66813787,66813564,66810697,66810374,66808989,66808521,66805912,66805777,66802880	66830976,66828077,66826780,66826583,66824885,66823600,66823306,66821559,66818637,66817487,66817028,66816672,66813846,66813697,66810772,66810413,66809075,66808613,66806026,66805826,66803118	Gene ID= ENSG00000159593.14 TPM= 2.34 Transcript Type= protein_coding
chr16	66802875	66830997	66802875	66830997	-	ENST00000290810.7@NAE1	ENST00000290810.7	protein_coding	66830847,66826677,66826523,66824855,66823529,66823227,66821450,66818528,66817425,66816965,66816581,66813787,66813564,66810697,66810374,66808989,66808521,66805912,66805777,66802875	66830997,66826780,66826583,66824885,66823600,66823306,66821559,66818637,66817487,66817028,66816672,66813846,66813697,66810772,66810413,66809075,66808613,66806026,66805826,66803118	Gene ID= ENSG00000159593.14 TPM= 37.36 Transcript Type= protein_coding
chr16	66880361	66891096	66880361	66891096	+	ENST00000311765.3@PDP2	ENST00000311765.3	protein_coding	66880361,66884231	66880640,66891096	Gene ID= ENSG00000172840.6 TPM= 2.34 Transcript Type= protein_coding
chr16	66921685	66925644	66921685	66925644	-	ENST00000299759.10@RRAD	ENST00000299759.10	protein_coding	66925409,66924810,66923846,66923516,66921685	66925644,66925194,66923919,66923720,66922353	Gene ID= ENSG00000166592.11 TPM= 56.04 Transcript Type= protein_coding
chr16	66921685	66927879	66921685	66927879	-	transcript4714.chr16.nic@RRAD	transcript4714.chr16.nic	protein_coding	66924810,66923846,66923516,66921685	66927879,66923919,66923720,66922353	Gene ID= ENSG00000166592.11 TPM= 5.84 Transcript Type= NA
chr16	66932055	66934400	66932055	66934400	-	ENST00000422424.6@FAM96B	ENST00000422424.6	protein_coding	66934223,66933987,66933614,66932780,66932055	66934400,66934066,66933739,66932825,66932300	Gene ID= ENSG00000166595.11 TPM= 77.06 Transcript Type= protein_coding
chr16	66934442	66945096	66934442	66945096	+	transcript4734.chr16.nic@CES2	transcript4734.chr16.nic	protein_coding	66934442,66938037,66939217,66940222,66940437,66941124,66941506,66941768,66942105,66942648,66943299	66935976,66938241,66939358,66940355,66940695,66941222,66941646,66941848,66942249,66942785,66945096	Gene ID= ENSG00000172831.11 TPM= 3.5 Transcript Type= NA
chr16	66934460	66945096	66934460	66945096	+	ENST00000317091.8@CES2	ENST00000317091.8	protein_coding	66934460,66938037,66939217,66940222,66940437,66941124,66941506,66941768,66942105,66942648,66943299,66943839	66935711,66938241,66939358,66940355,66940695,66941222,66941646,66941848,66942249,66942785,66943371,66945096	Gene ID= ENSG00000172831.11 TPM= 20.05 Transcript Type= protein_coding
chr16	66934444	66945069	66934444	66945069	+	ENST00000417689.5@CES2	ENST00000417689.5	protein_coding	66934444,66938037,66939217,66940222,66940437,66941124,66941506,66941768,66942105,66942648,66943299,66943839	66935711,66938241,66939358,66940355,66940695,66941222,66941646,66941848,66942249,66942737,66943371,66945069	Gene ID= ENSG00000172831.11 TPM= 2.53 Transcript Type= protein_coding
chr16	66934471	66944306	66934471	66944306	+	ENST00000568470.5@CES2	ENST00000568470.5	protein_coding	66934471,66938037,66939217,66940222,66940437,66941124,66941506,66941768,66942105,66942648,66943299,66943839	66935976,66938241,66939358,66940355,66940695,66941222,66941646,66941848,66942249,66942785,66943371,66944306	Gene ID= ENSG00000172831.11 TPM= 8.37 Transcript Type= nonsense_mediated_decay
chr16	66941985	66944405	66941985	66944405	+	transcript4746.chr16.nnic@NA	transcript4746.chr16.nnic	NA	66941985	66944405	Gene ID= novel_gene_chr16_4747 TPM= 2.34 Transcript Type= NA
chr16	67000519	67009735	67000519	67009735	+	transcript4750.chr16.nic@CES4A	transcript4750.chr16.nic	protein_coding	67000519,67000857,67001308,67003070,67003256,67003515,67004084,67004793,67006391,67006745,67008974	67000779,67000990,67001461,67003174,67003360,67003553,67004224,67005393,67006519,67006817,67009735	Gene ID= ENSG00000172824.14 TPM= 2.34 Transcript Type= NA
chr16	67000601	67009735	67000601	67009735	+	ENST00000543561.1@CES4A	ENST00000543561.1	protein_coding	67000601,67000857,67001308,67003070,67003256,67003515,67004084,67004793,67006745,67008974	67000779,67000990,67001461,67003174,67003360,67003553,67004224,67006519,67006817,67009735	Gene ID= ENSG00000172824.14 TPM= 1.17 Transcript Type= retained_intron
chr16	67029096	67101022	67029096	67101022	+	transcript4772.chr16.nic@CBFB	transcript4772.chr16.nic	protein_coding	67029096,67029727,67066682,67082213,67098710	67029485,67029813,67066798,67082308,67101022	Gene ID= ENSG00000067955.13 TPM= 3.5 Transcript Type= NA
chr16	67029204	67101058	67029204	67101058	+	transcript4774.chr16.nic@CBFB	transcript4774.chr16.nic	protein_coding	67029204,67029727,67066682,67082213,67098710	67029485,67029813,67066798,67082339,67101058	Gene ID= ENSG00000067955.13 TPM= 3.5 Transcript Type= NA
chr16	67029147	67101058	67029147	67101058	+	ENST00000290858.10@CBFB	ENST00000290858.10	protein_coding	67029147,67029727,67036639,67066682,67082213,67098710	67029485,67029813,67036755,67066798,67082339,67101058	Gene ID= ENSG00000067955.13 TPM= 73.56 Transcript Type= protein_coding
chr16	67029245	67101022	67029245	67101022	+	ENST00000412916.6@CBFB	ENST00000412916.6	protein_coding	67029245,67029727,67036639,67066682,67082213,67098710	67029485,67029813,67036755,67066798,67082308,67101022	Gene ID= ENSG00000067955.13 TPM= 7.01 Transcript Type= protein_coding
chr16	67109939	67148539	67109939	67148539	+	transcript4784.chr16.nic@C16orf70	transcript4784.chr16.nic	protein_coding	67109939,67110119,67120112,67125959,67131286,67132446,67132817,67134168,67134355,67139984,67140511,67144294,67144834,67145376,67145570,67146278,67147045	67110004,67110239,67120194,67126042,67131329,67132525,67132911,67134265,67134467,67140117,67140594,67144376,67144877,67145419,67145628,67146350,67148539	Gene ID= ENSG00000125149.11 TPM= 9.34 Transcript Type= NA
chr16	67148105	67151214	67148105	67151214	-	ENST00000449549.3@B3GNT9	ENST00000449549.3	protein_coding	67150865,67148105	67151214,67150671	Gene ID= ENSG00000237172.3 TPM= 39.7 Transcript Type= protein_coding
chr16	67154180	67160298	67154180	67160298	-	ENST00000345057.8@TRADD	ENST00000345057.8	protein_coding	67159838,67156510,67155377,67155096,67154180	67160298,67156668,67155654,67155294,67154959	Gene ID= ENSG00000102871.15 TPM= 92.24 Transcript Type= protein_coding
chr16	67154199	67160306	67154199	67160306	-	transcript4844.chr16.nnic@TRADD	transcript4844.chr16.nnic	protein_coding	67159838,67155377,67155096,67154199	67160306,67155654,67155294,67154959	Gene ID= ENSG00000102871.15 TPM= 15.18 Transcript Type= NA
chr16	67159931	67164176	67159931	67164176	+	ENST00000258200.7@FBXL8	ENST00000258200.7	protein_coding	67159931,67161735,67162848	67160056,67161937,67164176	Gene ID= ENSG00000135722.8 TPM= 21.6 Transcript Type= protein_coding
chr16	67159961	67164174	67159961	67164174	+	ENST00000519917.5@FBXL8	ENST00000519917.5	protein_coding	67159961,67161735,67162848,67164019	67160056,67161937,67163852,67164174	Gene ID= ENSG00000135722.8 TPM= 4.09 Transcript Type= protein_coding
chr16	67159974	67169939	67159974	67169939	+	transcript4798.chr16.nic@HSF4	transcript4798.chr16.nic	protein_coding	67159974,67161735,67162848,67164019,67164441,67165719,67165946,67166558,67167120,67167475,67167824,67168831,67169036,67169279,67169631	67160056,67161937,67163852,67164144,67165630,67165846,67166395,67166622,67167222,67167599,67167947,67168936,67169101,67169348,67169939	Gene ID= ENSG00000102878.16 TPM= 8.17 Transcript Type= NA
chr16	67170497	67175735	67170497	67175735	+	ENST00000268605.11@NOL3	ENST00000268605.11	protein_coding	67170497,67174162,67174621,67175047	67170574,67174464,67174944,67175735	Gene ID= ENSG00000140939.14 TPM= 23.94 Transcript Type= protein_coding
chr16	67173951	67175199	67173951	67175199	+	ENST00000566871.5@NOL3	ENST00000566871.5	protein_coding	67173951,67174162,67174621,67175047	67174046,67174340,67174944,67175199	Gene ID= ENSG00000140939.14 TPM= 1.17 Transcript Type= protein_coding
chr16	67174002	67175735	67174002	67175735	+	ENST00000568146.1@NOL3	ENST00000568146.1	protein_coding	67174002,67174162,67174621,67175047	67174046,67174454,67174944,67175735	Gene ID= ENSG00000140939.14 TPM= 9.92 Transcript Type= protein_coding
chr16	67175604	67179552	67175604	67179552	-	ENST00000561679.5@KIAA0895L	ENST00000561679.5	protein_coding	67178199,67178010,67175604	67179552,67178107,67176975	Gene ID= ENSG00000196123.12 TPM= 21.02 Transcript Type= retained_intron
chr16	67183739	67185847	67183739	67185847	+	transcript4850.chr16.nnic@NA	transcript4850.chr16.nnic	NA	67183739	67185847	Gene ID= novel_gene_chr16_4851 TPM= 3.5 Transcript Type= NA
chr16	67184366	67190204	67184366	67190204	-	ENST00000314586.10@EXOC3L1	ENST00000314586.10	protein_coding	67189971,67189631,67189020,67188721,67187225,67187021,67186759,67186557,67186237,67185361,67185136,67184902,67184686,67184366	67190204,67189683,67189180,67188940,67187837,67187138,67186884,67186657,67186347,67185490,67185258,67185057,67184810,67184604	Gene ID= ENSG00000179044.15 TPM= 8.96 Transcript Type= protein_coding
chr16	67184379	67190248	67184379	67190248	-	transcript4808.chr16.nnic@EXOC3L1	transcript4808.chr16.nnic	protein_coding	67189971,67189631,67189020,67188721,67187225,67187021,67186759,67186557,67186237,67185361,67185136,67184902,67184686,67184379	67190248,67189877,67189180,67188940,67187837,67187138,67186884,67186657,67186347,67185490,67185258,67185057,67184810,67184604	Gene ID= ENSG00000179044.15 TPM= 6.62 Transcript Type= NA
chr16	67184379	67190136	67184379	67190136	-	transcript4812.chr16.nic@EXOC3L1	transcript4812.chr16.nic	protein_coding	67189631,67189020,67188721,67187225,67187021,67186759,67186557,67186237,67185361,67185136,67184902,67184686,67184379	67190136,67189180,67188940,67187837,67187138,67186884,67186657,67186347,67185490,67185258,67185057,67184810,67184604	Gene ID= ENSG00000179044.15 TPM= 4.29 Transcript Type= NA
chr16	67184379	67190165	67184379	67190165	-	transcript4817.chr16.nic@EXOC3L1	transcript4817.chr16.nic	protein_coding	67189971,67189631,67189020,67188721,67187225,67187021,67186759,67186557,67186237,67185361,67185136,67184686,67184379	67190165,67189683,67189180,67188940,67187837,67187138,67186884,67186657,67186347,67185490,67185258,67185057,67184604	Gene ID= ENSG00000179044.15 TPM= 8.17 Transcript Type= NA
chr16	67185156	67188303	67185156	67188303	+	transcript4852.chr16.nnic@NA	transcript4852.chr16.nnic	NA	67185156	67188303	Gene ID= novel_gene_chr16_4853 TPM= 2.34 Transcript Type= NA
chr16	67192135	67198918	67192135	67198918	+	transcript4864.chr16.nic@E2F4	transcript4864.chr16.nic	protein_coding	67192135,67192761,67193472,67194398,67194686,67195782,67197599,67197867,67198008	67192362,67193170,67193515,67194459,67194980,67196006,67197646,67197911,67198918	Gene ID= ENSG00000205250.8 TPM= 33.78 Transcript Type= NA
chr16	67192135	67198916	67192135	67198916	+	transcript4867.chr16.nic@E2F4	transcript4867.chr16.nic	protein_coding	67192135,67192761,67193472,67194398,67194686,67195782,67197599,67197867	67192362,67193170,67193515,67194459,67194980,67196006,67197646,67198916	Gene ID= ENSG00000205250.8 TPM= 7.71 Transcript Type= NA
chr16	67192169	67198918	67192169	67198918	+	ENST00000379378.7@E2F4	ENST00000379378.7	protein_coding	67192169,67192761,67193009,67193472,67194398,67194686,67195782,67197599,67197867,67198008	67192362,67192870,67193170,67193515,67194459,67194980,67196006,67197646,67197911,67198918	Gene ID= ENSG00000205250.8 TPM= 124.85 Transcript Type= protein_coding
chr16	67192185	67198917	67192185	67198917	+	ENST00000567007.5@E2F4	ENST00000567007.5	protein_coding	67192185,67193472,67194398,67194686,67195782,67197599,67197867,67198008	67193170,67193515,67194459,67194980,67196006,67197646,67197911,67198917	Gene ID= ENSG00000205250.8 TPM= 9.26 Transcript Type= retained_intron
chr16	67199111	67204029	67199111	67204029	+	ENST00000393997.6@ELMO3	ENST00000393997.6	protein_coding	67199111,67199553,67199684,67199951,67200192,67200451,67200657,67200890,67201385,67201520,67201742,67201977,67202176,67202397,67202627,67202892,67203119,67203327,67203497,67203665	67199404,67199593,67199756,67200001,67200361,67200550,67200808,67200968,67201435,67201642,67201873,67202078,67202284,67202533,67202790,67203004,67203223,67203409,67203583,67204029	Gene ID= ENSG00000102890.14 TPM= 19.85 Transcript Type= protein_coding
chr16	67207140	67226998	67207140	67226998	-	ENST00000629962.2@LRRC29	ENST00000629962.2	protein_coding	67226975,67223826,67210048,67208312,67207873,67207599,67207140	67226998,67223927,67210322,67208455,67208090,67207773,67207504	Gene ID= ENSG00000125122.15 TPM= 2.34 Transcript Type= protein_coding
chr16	67227113	67229278	67227113	67229278	+	ENST00000304800.13@TMEM208	ENST00000304800.13	protein_coding	67227113,67227836,67228355,67228495,67228797,67228976	67227224,67227931,67228414,67228631,67228881,67229278	Gene ID= ENSG00000168701.18 TPM= 30.36 Transcript Type= protein_coding
chr16	67227120	67229262	67227120	67229262	+	ENST00000563953.5@TMEM208	ENST00000563953.5	protein_coding	67227120,67227719,67228355,67228495,67228797,67228976	67227224,67227931,67228414,67228631,67228881,67229262	Gene ID= ENSG00000168701.18 TPM= 3.5 Transcript Type= protein_coding
chr16	67227168	67229278	67227168	67229278	+	ENST00000565201.1@TMEM208	ENST00000565201.1	protein_coding	67227168,67227836,67228355,67228495,67228797	67227224,67227931,67228414,67228631,67229278	Gene ID= ENSG00000168701.18 TPM= 1.17 Transcript Type= protein_coding
chr16	67229389	67247658	67229389	67247658	-	ENST00000258201.8@FHOD1	ENST00000258201.8	protein_coding	67247210,67239348,67238903,67238380,67238202,67238034,67237657,67237475,67237239,67236966,67236557,67234357,67233657,67232039,67231637,67231430,67231188,67230601,67230314,67230066,67229793,67229389	67247658,67239454,67238967,67238447,67238307,67238128,67237768,67237569,67237382,67237114,67236733,67234472,67234267,67232194,67231819,67231549,67231349,67230791,67230506,67230228,67229990,67229718	Gene ID= ENSG00000135723.13 TPM= 65.39 Transcript Type= protein_coding
chr16	67229391	67247522	67229391	67247522	-	transcript4891.chr16.nic@FHOD1	transcript4891.chr16.nic	protein_coding	67247210,67239348,67238903,67238380,67238202,67238034,67237657,67237475,67237239,67236966,67236557,67234357,67233657,67232039,67231637,67231430,67230601,67230314,67230066,67229793,67229391	67247522,67239454,67238967,67238447,67238307,67238128,67237768,67237569,67237382,67237114,67236733,67234472,67234267,67232194,67231819,67231549,67230791,67230506,67230228,67229990,67229718	Gene ID= ENSG00000135723.13 TPM= 12.84 Transcript Type= NA
chr16	67277510	67289479	67277510	67289479	+	ENST00000360461.9@PLEKHG4	ENST00000360461.9	protein_coding	67277510,67280711,67280882,67281091,67281567,67281724,67282009,67282201,67282503,67282742,67284275,67284713,67285290,67286274,67286445,67286749,67287000,67287898,67288167,67288489,67288803	67280543,67280806,67281005,67281184,67281644,67281837,67282107,67282349,67282641,67282858,67284457,67285215,67285536,67286363,67286666,67286919,67287177,67288014,67288400,67288604,67289479	Gene ID= ENSG00000196155.12 TPM= 14.59 Transcript Type= protein_coding
chr16	67277510	67289479	67277510	67289479	+	ENST00000563969.5@PLEKHG4	ENST00000563969.5	protein_coding	67277510,67280882,67281091,67281567,67281724,67282009,67282201,67282503,67282742,67284275,67284713,67285290,67286274,67286445,67286749,67287000,67287898,67288167,67288489,67288803	67280806,67281005,67281184,67281644,67281837,67282107,67282349,67282641,67282858,67284457,67285215,67285536,67286363,67286666,67286919,67287177,67288014,67288400,67288604,67289479	Gene ID= ENSG00000196155.12 TPM= 14.59 Transcript Type= nonsense_mediated_decay
chr16	67389809	67393535	67389809	67393535	-	ENST00000393957.6@TPPP3	ENST00000393957.6	protein_coding	67393380,67390924,67390479,67389809	67393535,67391117,67390632,67390362	Gene ID= ENSG00000159713.10 TPM= 9.34 Transcript Type= protein_coding
chr16	67394419	67416502	67394419	67416502	-	transcript4931.chr16.nic@ZDHHC1	transcript4931.chr16.nic	protein_coding	67416171,67407767,67406200,67400957,67399355,67398820,67398573,67398212,67395484,67395187,67395002,67394419	67416502,67407813,67406442,67401132,67399456,67398944,67398731,67398324,67395566,67395280,67395062,67394893	Gene ID= ENSG00000159714.10 TPM= 10.51 Transcript Type= NA
chr16	67438019	67481237	67438019	67481237	-	ENST00000290949.7@ATP6V0D1	ENST00000290949.7	protein_coding	67480957,67453544,67444528,67443099,67439274,67438971,67438793,67438019	67481237,67453715,67444706,67443178,67439351,67439147,67438870,67438689	Gene ID= ENSG00000159720.11 TPM= 417.41 Transcript Type= protein_coding
chr16	67461735	67462841	67461735	67462841	+	transcript4962.chr16.nnic@NA	transcript4962.chr16.nnic	NA	67461735	67462841	Gene ID= novel_gene_chr16_4963 TPM= 2.34 Transcript Type= NA
chr16	67481384	67484669	67481384	67484669	+	ENST00000602596.1@AC009061.2	ENST00000602596.1	antisense_RNA	67481384,67484110	67481519,67484669	Gene ID= ENSG00000270049.2 TPM= 1.17 Transcript Type= antisense_RNA
chr16	67482571	67483222	67482571	67483222	-	transcript4966.chr16.nic@AGRP	transcript4966.chr16.nic	protein_coding	67483025,67482571	67483222,67482818	Gene ID= ENSG00000159723.4 TPM= 2.34 Transcript Type= NA
chr16	67482571	67483813	67482571	67483813	-	ENST00000290953.2@AGRP	ENST00000290953.2	protein_coding	67483517,67483269,67483025,67482571	67483813,67483401,67483110,67482818	Gene ID= ENSG00000159723.4 TPM= 2.34 Transcript Type= protein_coding
chr16	67517950	67528675	67517950	67528675	-	ENST00000621378.1@AC027682.6	ENST00000621378.1	antisense_RNA	67528317,67517950	67528675,67518385	Gene ID= ENSG00000276075.1 TPM= 1.17 Transcript Type= antisense_RNA
chr16	67537454	67546788	67537454	67546788	+	ENST00000428437.6@RIPOR1	ENST00000428437.6	protein_coding	67537454,67538424,67538672,67538990,67539728,67539846,67540053,67540300,67540458,67540579,67541430,67541653,67541867,67543348,67544299,67544695,67544956,67545376,67545664,67545949,67546141,67546366	67537597,67538550,67538824,67539068,67539751,67539899,67540205,67540363,67540501,67540704,67541578,67541782,67543264,67543469,67544431,67544830,67545117,67545534,67545860,67546032,67546231,67546788	Gene ID= ENSG00000039523.19 TPM= 101.58 Transcript Type= protein_coding
chr16	67562407	67639183	67562407	67639183	+	ENST00000264010.8@CTCF	ENST00000264010.8	protein_coding	67562407,67571148,67610824,67611951,67616745,67620697,67621442,67626555,67628370,67629398,67636690,67637688	67562724,67571264,67611613,67612121,67616878,67620817,67621591,67626715,67628552,67629533,67636851,67639183	Gene ID= ENSG00000102974.14 TPM= 87.57 Transcript Type= protein_coding
chr16	67657532	67660279	67657532	67660279	-	transcript4983.chr16.nic@ACD	transcript4983.chr16.nic	protein_coding	67659903,67659702,67659537,67659375,67659229,67658928,67658720,67658555,67657986,67657762,67657532	67660279,67659795,67659613,67659419,67659263,67659079,67658816,67658641,67658362,67657853,67657684	Gene ID= ENSG00000102977.13 TPM= 7.01 Transcript Type= NA
chr16	67657563	67660281	67657563	67660281	-	ENST00000602860.5@ACD	ENST00000602860.5	protein_coding	67660122,67659903,67659702,67658928,67658720,67658555,67657986,67657762,67657563	67660281,67660045,67659795,67659613,67658816,67658641,67658362,67657853,67657684	Gene ID= ENSG00000102977.13 TPM= 1.17 Transcript Type= retained_intron
chr16	67660928	67662774	67660928	67662774	+	transcript4993.chr16.nnic@PARD6A	transcript4993.chr16.nnic	protein_coding	67660928,67661455,67661896	67661101,67661710,67662774	Gene ID= ENSG00000102981.9 TPM= 2.34 Transcript Type= NA
chr16	67660959	67662774	67660959	67662774	+	ENST00000219255.3@PARD6A	ENST00000219255.3	protein_coding	67660959,67661455,67661893	67661101,67661677,67662774	Gene ID= ENSG00000102981.9 TPM= 24.52 Transcript Type= protein_coding
chr16	67662945	67666745	67662945	67666745	-	transcript4994.chr16.nnic@ENKD1	transcript4994.chr16.nnic	protein_coding	67666553,67666358,67666071,67664996,67663937,67663657,67663420,67662945	67666745,67666371,67666265,67665168,67664062,67663820,67663556,67663321	Gene ID= ENSG00000124074.11 TPM= 2.92 Transcript Type= NA
chr16	67662945	67666764	67662945	67666764	-	ENST00000243878.8@ENKD1	ENST00000243878.8	protein_coding	67666358,67666071,67664996,67663937,67663657,67663420,67662945	67666764,67666265,67665168,67664062,67663820,67663556,67663321	Gene ID= ENSG00000124074.11 TPM= 18.1 Transcript Type= protein_coding
chr16	67666816	67668758	67666816	67668758	+	ENST00000403458.8@C16orf86	ENST00000403458.8	protein_coding	67666816,67667296,67667878,67668200	67667072,67667525,67668098,67668758	Gene ID= ENSG00000159761.14 TPM= 4.09 Transcript Type= protein_coding
chr16	67666816	67668757	67666816	67668757	+	ENST00000459925.1@C16orf86	ENST00000459925.1	protein_coding	67666816,67667296	67667072,67668757	Gene ID= ENSG00000159761.14 TPM= 1.75 Transcript Type= retained_intron
chr16	67674533	67719421	67674533	67719421	-	ENST00000268797.11@GFOD2	ENST00000268797.11	protein_coding	67719163,67685457,67674533	67719421,67685802,67676053	Gene ID= ENSG00000141098.12 TPM= 25.69 Transcript Type= protein_coding
chr16	67680434	67719300	67680434	67719300	-	ENST00000602279.2@GFOD2	ENST00000602279.2	protein_coding	67719163,67680434	67719300,67685802	Gene ID= ENSG00000141098.12 TPM= 3.5 Transcript Type= protein_coding
chr16	67723066	67806652	67723066	67806652	-	ENST00000317506.7@RANBP10	ENST00000317506.7	protein_coding	67806302,67805428,67772034,67744288,67738013,67734858,67731472,67729938,67729680,67729280,67728390,67727751,67727327,67723066	67806652,67805539,67772086,67744455,67738035,67735042,67731584,67730046,67729828,67729484,67728511,67727896,67727438,67726558	Gene ID= ENSG00000141084.10 TPM= 16.35 Transcript Type= protein_coding
chr16	67828159	67833897	67828159	67833897	-	ENST00000565157.5@CENPT	ENST00000565157.5	protein_coding	67833750,67832455,67832228,67832012,67831754,67831576,67831216,67829765,67829423,67828667,67828474,67828159	67833897,67832545,67832315,67832108,67831890,67831612,67831358,67830548,67829516,67828843,67828578,67828390	Gene ID= ENSG00000102901.12 TPM= 35.41 Transcript Type= retained_intron
chr16	67828157	67833913	67828157	67833913	-	ENST00000569862.5@CENPT	ENST00000569862.5	protein_coding	67833750,67832228,67832012,67831754,67831576,67829765,67829423,67828667,67828474,67828157	67833913,67832545,67832108,67831890,67831612,67831358,67829516,67828843,67828578,67828390	Gene ID= ENSG00000102901.12 TPM= 14.4 Transcript Type= retained_intron
chr16	67828187	67833880	67828187	67833880	-	ENST00000563885.5@CENPT	ENST00000563885.5	protein_coding	67833750,67832455,67832228,67832012,67831754,67831576,67831216,67829922,67829423,67828667,67828474,67828187	67833880,67832545,67832315,67832108,67831890,67831612,67831358,67830548,67829516,67828843,67828578,67828390	Gene ID= ENSG00000102901.12 TPM= 2.34 Transcript Type= retained_intron
chr16	67828165	67833896	67828165	67833896	-	ENST00000626059.2@CENPT	ENST00000626059.2	protein_coding	67833750,67832455,67832012,67831754,67831576,67831216,67830390,67829765,67829423,67828667,67828474,67828165	67833896,67832545,67832108,67831890,67831612,67831358,67830548,67830088,67829516,67828843,67828578,67828390	Gene ID= ENSG00000102901.12 TPM= 2.72 Transcript Type= protein_coding
chr16	67842082	67844195	67842082	67844195	+	ENST00000303596.2@THAP11	ENST00000303596.2	protein_coding	67842082	67844195	Gene ID= ENSG00000168286.2 TPM= 140.11 Transcript Type= protein_coding
chr16	67846732	67872567	67846732	67872567	+	ENST00000219169.8@NUTF2	ENST00000219169.8	protein_coding	67846732,67865102,67868340,67868501,67870800	67846985,67865229,67868411,67868599,67872567	Gene ID= ENSG00000102898.11 TPM= 55.46 Transcript Type= protein_coding
chr16	67847161	67871323	67847161	67871323	+	ENST00000569436.6@NUTF2	ENST00000569436.6	protein_coding	67847161,67865102,67868340,67868501,67870800	67847456,67865229,67868411,67868599,67871323	Gene ID= ENSG00000102898.11 TPM= 8.17 Transcript Type= protein_coding
chr16	67846882	67872562	67846882	67872562	+	transcript5047.chr16.nnic@NUTF2	transcript5047.chr16.nnic	protein_coding	67846882,67865102,67868340,67871229	67846985,67865229,67868415,67872562	Gene ID= ENSG00000102898.11 TPM= 2.92 Transcript Type= NA
chr16	67846919	67871323	67846919	67871323	+	transcript5048.chr16.nnic@NUTF2	transcript5048.chr16.nnic	protein_coding	67846919,67868340,67868501,67870800	67846985,67868411,67868599,67871323	Gene ID= ENSG00000102898.11 TPM= 4.67 Transcript Type= NA
chr16	67873051	67884497	67873051	67884497	+	transcript5017.chr16.nnic@EDC4	transcript5017.chr16.nnic	protein_coding	67873051,67875945,67876488,67876873,67877217,67877509,67877741,67878166,67878360,67878536,67878737,67878957,67879237,67879412,67879587,67879850,67880063,67880557,67881076,67881265,67881497,67881668,67881954,67882212,67882429,67882679,67882958,67883568,67883956	67873343,67876101,67876599,67876972,67877406,67877656,67877845,67878275,67878443,67878631,67878839,67879137,67879309,67879503,67879774,67879971,67880141,67880990,67881180,67881417,67881533,67881845,67882109,67882327,67882594,67882865,67883177,67883731,67884497	Gene ID= ENSG00000038358.14 TPM= 9.25 Transcript Type= NA
chr16	67873023	67884503	67873023	67884503	+	ENST00000358933.9@EDC4	ENST00000358933.9	protein_coding	67873023,67875945,67876488,67876873,67877217,67877509,67877741,67878166,67878360,67878536,67878737,67878957,67879237,67879412,67879587,67879850,67880063,67880557,67881076,67881265,67881497,67881668,67881954,67882212,67882429,67882679,67882958,67883568,67883956	67873343,67876101,67876599,67876972,67877406,67877656,67877845,67878275,67878443,67878631,67878839,67879137,67879309,67879503,67879774,67879971,67880216,67880990,67881180,67881417,67881533,67881845,67882109,67882327,67882594,67882865,67883177,67883731,67884503	Gene ID= ENSG00000038358.14 TPM= 70.73 Transcript Type= protein_coding
chr16	67873051	67884497	67873051	67884497	+	transcript5022.chr16.nic@EDC4	transcript5022.chr16.nic	protein_coding	67873051,67875945,67876488,67876873,67877217,67877509,67877741,67878166,67878360,67878536,67878737,67878957,67879237,67879412,67879587,67879850,67880063,67880557,67881076,67881265,67881497,67881668,67882212,67882429,67882679,67882958,67883568,67883956	67873343,67876101,67876599,67876972,67877406,67877656,67877845,67878275,67878443,67878631,67878839,67879137,67879309,67879503,67879774,67879971,67880216,67880990,67881180,67881417,67881533,67882109,67882327,67882594,67882865,67883177,67883731,67884497	Gene ID= ENSG00000038358.14 TPM= 9.83 Transcript Type= NA
chr16	67893272	67929678	67893272	67929678	+	ENST00000291041.5@PSKH1	ENST00000291041.5	protein_coding	67893272,67908680,67927325	67893371,67909706,67929678	Gene ID= ENSG00000159792.9 TPM= 25.69 Transcript Type= protein_coding
chr16	67934502	67937087	67934502	67937087	-	ENST00000358514.8@PSMB10	ENST00000358514.8	protein_coding	67936694,67936398,67936215,67935963,67935582,67935420,67934797,67934502	67937087,67936485,67936312,67936103,67935697,67935478,67934948,67934671	Gene ID= ENSG00000205220.11 TPM= 57.8 Transcript Type= protein_coding
chr16	67934506	67935795	67934506	67935795	-	ENST00000570985.1@PSMB10	ENST00000570985.1	protein_coding	67935582,67935420,67934797,67934506	67935795,67935478,67934948,67934671	Gene ID= ENSG00000205220.11 TPM= 2.92 Transcript Type= retained_intron
chr16	67939882	67943715	67939882	67943715	-	transcript5097.chr16.nnic@NA	transcript5097.chr16.nnic	NA	67939882	67943715	Gene ID= novel_gene_chr16_5098 TPM= 5.84 Transcript Type= NA
chr16	67943474	67968694	67943474	67968694	-	ENST00000316341.7@SLC12A4	ENST00000316341.7	protein_coding	67968439,67963465,67961575,67957898,67957742,67954643,67952184,67951823,67951140,67950962,67950654,67950319,67949800,67948061,67947669,67947331,67946937,67946438,67946171,67945951,67945764,67945369,67945087,67943474	67968694,67963559,67961706,67958044,67957796,67954773,67952425,67952037,67951304,67951060,67950711,67950493,67949918,67948159,67947788,67947435,67947105,67946633,67946340,67946082,67945871,67945553,67945220,67944931	Gene ID= ENSG00000124067.16 TPM= 10.51 Transcript Type= protein_coding
chr16	67944328	67968619	67944328	67968619	-	transcript5078.chr16.nnic@SLC12A4	transcript5078.chr16.nnic	protein_coding	67967837,67963465,67961575,67957898,67957742,67954643,67952184,67951823,67951140,67950962,67950654,67950319,67949800,67948061,67947669,67947331,67946937,67946438,67946171,67945951,67945764,67945369,67945087,67944328	67968619,67963559,67961706,67958044,67957796,67954773,67952425,67952037,67951304,67951060,67950711,67950493,67949918,67948159,67947788,67947435,67947105,67946633,67946340,67946082,67945871,67945553,67945220,67944931	Gene ID= ENSG00000124067.16 TPM= 58.38 Transcript Type= NA
chr16	67987394	67994294	67987394	67994294	-	transcript5101.chr16.nic@DPEP2	transcript5101.chr16.nic	protein_coding	67994158,67992950,67992510,67992064,67991838,67991115,67990821,67990047,67989323,67987852,67987394	67994294,67993257,67992636,67992193,67991979,67991184,67990997,67990131,67989398,67987987,67987760	Gene ID= ENSG00000167261.13 TPM= 2.72 Transcript Type= NA
chr16	67987394	67994361	67987394	67994361	-	transcript5102.chr16.nnic@DPEP2	transcript5102.chr16.nnic	protein_coding	67994206,67992950,67992510,67992064,67991838,67991115,67990821,67990047,67989323,67987852,67987394	67994361,67993257,67992636,67992193,67991979,67991184,67990997,67990131,67989398,67987987,67987760	Gene ID= ENSG00000167261.13 TPM= 3.89 Transcript Type= NA
chr16	67987394	67999453	67987394	67999453	-	ENST00000393847.5@DPEP2	ENST00000393847.5	protein_coding	67999375,67992950,67992510,67992064,67991838,67991115,67990821,67990047,67989323,67987852,67987394	67999453,67993257,67992636,67992193,67991979,67991184,67990997,67990131,67989398,67987987,67987760	Gene ID= ENSG00000167261.13 TPM= 13.23 Transcript Type= protein_coding
chr16	67991372	67995823	67991372	67995823	-	transcript5118.chr16.nnic@NA	transcript5118.chr16.nnic	NA	67991372	67995823	Gene ID= novel_gene_chr16_5119 TPM= 5.84 Transcript Type= NA
chr16	68022956	68079320	68022956	68079320	+	ENST00000565263.5@DUS2	ENST00000565263.5	protein_coding	68022956,68025415,68038006,68049505,68053564,68054574,68056364,68061066,68066317,68066566,68070134,68070940,68074034,68075355,68076632,68078445,68078749	68023351,68025494,68038149,68049550,68053655,68054617,68056424,68061113,68066382,68066636,68070220,68071108,68074155,68075504,68076719,68078518,68079320	Gene ID= ENSG00000167264.17 TPM= 15.18 Transcript Type= protein_coding
chr16	68023253	68079320	68023253	68079320	+	ENST00000358896.10@DUS2	ENST00000358896.10	protein_coding	68023253,68038006,68049505,68053564,68054574,68056364,68061066,68066317,68066566,68070134,68070940,68074034,68075355,68076632,68078445,68078749	68023351,68038149,68049550,68053655,68054617,68056424,68061113,68066382,68066636,68070220,68071108,68074155,68075504,68076719,68078518,68079320	Gene ID= ENSG00000167264.17 TPM= 2.34 Transcript Type= protein_coding
chr16	68021274	68023442	68021274	68023442	-	ENST00000332395.6@DDX28	ENST00000332395.6	protein_coding	68021274	68023442	Gene ID= ENSG00000182810.6 TPM= 35.03 Transcript Type= protein_coding
chr16	68084751	68226934	68084751	68226934	+	ENST00000563319.5@NFATC3	ENST00000563319.5	protein_coding	68084751,68121987,68126448,68157869,68166843,68174374,68181475,68183240,68190768,68214329,68226350	68085180,68123121,68126610,68158068,68167015,68174514,68181530,68183366,68191775,68214432,68226934	Gene ID= ENSG00000072736.18 TPM= 4.29 Transcript Type= processed_transcript
chr16	68084754	68226923	68084754	68226923	+	transcript5153.chr16.nnic@NFATC3	transcript5153.chr16.nnic	protein_coding	68084754,68121987,68126448,68157869,68166843,68174374,68181475,68190768,68226350	68085180,68123121,68126610,68158068,68167015,68174514,68181530,68191775,68226923	Gene ID= ENSG00000072736.18 TPM= 5.45 Transcript Type= NA
chr16	68085344	68218090	68085344	68218090	+	ENST00000575270.5@NFATC3	ENST00000575270.5	protein_coding	68085344,68121987,68126448,68157869,68166843,68174374,68181475,68183240,68190768,68217711	68085784,68123121,68126610,68158068,68167015,68174514,68181530,68183366,68191775,68218090	Gene ID= ENSG00000072736.18 TPM= 6.62 Transcript Type= protein_coding
chr16	68229126	68236584	68229126	68236584	-	ENST00000473183.6@ESRP2	ENST00000473183.6	protein_coding	68235848,68235634,68233994,68233768,68233327,68232761,68232577,68232371,68232246,68231802,68231482,68231178,68230841,68230389,68229126	68236584,68235762,68234107,68233882,68233425,68232815,68232687,68232503,68232288,68232103,68231694,68231376,68231027,68230554,68230315	Gene ID= ENSG00000103067.13 TPM= 14.59 Transcript Type= protein_coding
chr16	68229111	68236132	68229111	68236132	-	ENST00000565858.5@ESRP2	ENST00000565858.5	protein_coding	68235848,68235634,68233994,68233768,68233327,68232761,68232577,68232371,68232246,68231802,68231482,68231178,68230841,68230389,68229111	68236132,68235762,68234107,68233882,68233425,68232815,68232717,68232503,68232288,68232103,68231694,68231376,68231027,68230554,68230315	Gene ID= ENSG00000103067.13 TPM= 8.76 Transcript Type= protein_coding
chr16	68245326	68261056	68245326	68261056	+	transcript5166.chr16.nic@PLA2G15	transcript5166.chr16.nic	protein_coding	68245326,68249290,68253422,68254919,68255282,68255766,68259146	68245553,68249446,68253517,68255037,68255380,68255990,68261056	Gene ID= ENSG00000103066.12 TPM= 4.67 Transcript Type= NA
chr16	68251353	68261056	68251353	68261056	+	transcript5175.chr16.nnic@PLA2G15	transcript5175.chr16.nnic	protein_coding	68251353,68253653,68255891,68259146	68251535,68255380,68255990,68261056	Gene ID= ENSG00000103066.12 TPM= 3.97 Transcript Type= NA
chr16	68245344	68261062	68245344	68261062	+	ENST00000219345.9@PLA2G15	ENST00000219345.9	protein_coding	68245344,68249290,68254919,68255282,68255766,68259146	68245553,68249446,68255037,68255380,68255990,68261062	Gene ID= ENSG00000103066.12 TPM= 114.42 Transcript Type= protein_coding
chr16	68256276	68258794	68256276	68258794	+	transcript5176.chr16.nnic@NA	transcript5176.chr16.nnic	NA	68256276	68258794	Gene ID= novel_gene_chr16_5177 TPM= 2.34 Transcript Type= NA
chr16	68264532	68288986	68264532	68288986	+	transcript5195.chr16.nnic@SLC7A6	transcript5195.chr16.nnic	protein_coding	68264532,68274691,68287746	68264576,68275249,68288986	Gene ID= ENSG00000103064.13 TPM= 2.34 Transcript Type= NA
chr16	68264530	68301819	68264530	68301819	+	ENST00000219343.10@SLC7A6	ENST00000219343.10	protein_coding	68264530,68266593,68274691,68287746,68290396,68291209,68291558,68294705,68296364,68296627,68297234	68264576,68266721,68275249,68287871,68290540,68291332,68291661,68294801,68296513,68296810,68301819	Gene ID= ENSG00000103064.13 TPM= 19.85 Transcript Type= protein_coding
chr16	68266199	68267178	68266199	68267178	-	transcript5197.chr16.nnic@NA	transcript5197.chr16.nnic	NA	68266199	68267178	Gene ID= novel_gene_chr16_5198 TPM= 2.34 Transcript Type= NA
chr16	68278454	68285774	68278454	68285774	-	transcript5199.chr16.nnic@NA	transcript5199.chr16.nnic	NA	68278454	68285774	Gene ID= novel_gene_chr16_5200 TPM= 4.67 Transcript Type= NA
chr16	68310984	68357259	68310984	68357259	+	transcript5211.chr16.nic@PRMT7	transcript5211.chr16.nic	protein_coding	68310984,68312042,68315897,68321426,68324683,68329066,68337459,68339322,68339788,68345675,68346145,68347211,68347631,68348342,68352248,68353492,68355723,68356701,68357054	68311099,68312176,68316074,68321462,68324832,68329174,68337571,68339563,68339968,68345802,68346280,68347294,68347678,68348431,68352409,68353566,68355883,68356797,68357259	Gene ID= ENSG00000132600.16 TPM= 9.92 Transcript Type= NA
chr16	68310984	68357259	68310984	68357259	+	transcript5217.chr16.nic@PRMT7	transcript5217.chr16.nic	protein_coding	68310984,68312042,68315897,68324683,68329066,68337459,68339322,68339788,68345675,68346145,68347211,68347631,68348342,68352248,68353492,68355723,68356701,68357054	68311099,68312176,68316074,68324832,68329174,68337571,68339563,68339968,68345802,68346280,68347294,68347678,68348431,68352409,68353566,68355883,68356797,68357259	Gene ID= ENSG00000132600.16 TPM= 2.34 Transcript Type= NA
chr16	68311019	68357259	68311019	68357259	+	transcript5220.chr16.nic@PRMT7	transcript5220.chr16.nic	protein_coding	68311019,68315897,68321426,68324683,68329066,68337459,68339322,68339788,68345675,68346145,68347211,68347631,68348342,68352248,68353492,68355723,68356701,68357054	68311099,68316074,68321462,68324832,68329174,68337571,68339563,68339968,68345802,68346280,68347294,68347678,68348431,68352409,68353566,68355883,68356797,68357259	Gene ID= ENSG00000132600.16 TPM= 4.67 Transcript Type= NA
chr16	68310984	68357259	68310984	68357259	+	transcript5224.chr16.nic@PRMT7	transcript5224.chr16.nic	protein_coding	68310984,68312042,68315897,68321426,68324683,68329066,68337459,68339322,68339788,68345675,68346145,68352248,68353492,68355723,68356701,68357054	68311099,68312176,68316074,68321462,68324832,68329174,68337571,68339563,68339968,68345802,68346280,68352409,68353566,68355883,68356797,68357259	Gene ID= ENSG00000132600.16 TPM= 2.34 Transcript Type= NA
chr16	68358325	68448688	68358325	68448688	-	ENST00000219334.9@SMPD3	ENST00000219334.9	protein_coding	68448353,68386598,68370859,68365017,68364751,68363777,68363496,68361603,68358325	68448688,68386659,68372387,68365092,68364906,68363866,68363559,68361759,68361307	Gene ID= ENSG00000103056.11 TPM= 14.01 Transcript Type= protein_coding
chr16	68539213	68567131	68539213	68567131	+	ENST00000570495.5@ZFP90	ENST00000570495.5	protein_coding	68539213,68539758,68557998,68558473,68563044	68539469,68539825,68558124,68558568,68567131	Gene ID= ENSG00000184939.15 TPM= 5.25 Transcript Type= protein_coding
chr16	68539297	68567135	68539297	68567135	+	ENST00000564558.5@ZFP90	ENST00000564558.5	protein_coding	68539297,68539758,68557998,68558375,68563044	68539479,68539825,68558124,68558568,68567135	Gene ID= ENSG00000184939.15 TPM= 4.09 Transcript Type= nonsense_mediated_decay
chr16	68644836	68700295	68644836	68700295	+	ENST00000264012.8@CDH3	ENST00000264012.8	protein_coding	68644836,68645636,68676385,68678134,68678501,68678762,68679799,68680968,68682302,68684583,68685205,68687512,68691720,68695255,68695777,68698191	68645424,68645750,68676470,68678277,68678656,68678906,68679974,68681096,68682487,68684824,68685350,68687736,68691926,68695385,68695923,68700295	Gene ID= ENSG00000062038.13 TPM= 8.17 Transcript Type= protein_coding
chr16	68645298	68699039	68645298	68699039	+	transcript5240.chr16.nnic@CDH3	transcript5240.chr16.nnic	protein_coding	68645298,68645636,68676385,68678134,68678501,68678762,68679799,68682302,68684583,68685205,68687512,68691720,68695255,68695777,68698191	68645424,68645750,68676470,68678277,68678656,68678906,68679974,68682487,68684824,68685350,68687736,68691926,68695385,68695923,68699039	Gene ID= ENSG00000062038.13 TPM= 2.34 Transcript Type= NA
chr16	68737225	68835548	68737225	68835548	+	ENST00000261769.9@CDH1	ENST00000261769.9	protein_coding	68737225,68738297,68801670,68808424,68808693,68810197,68811684,68812135,68813313,68815515,68819280,68822001,68823399,68828174,68829654,68833290	68737463,68738411,68801893,68808567,68808848,68810341,68811859,68812263,68813495,68815759,68819425,68822225,68823626,68828304,68829797,68835548	Gene ID= ENSG00000039068.18 TPM= 89.9 Transcript Type= protein_coding
chr16	68750152	68751071	68750152	68751071	-	transcript5252.chr16.nnic@NA	transcript5252.chr16.nnic	NA	68750152	68751071	Gene ID= novel_gene_chr16_5253 TPM= 3.5 Transcript Type= NA
chr16	68843606	69085180	68843606	69085180	+	ENST00000261778.1@TANGO6	ENST00000261778.1	protein_coding	68843606,68859884,68862945,68867079,68875154,68878118,68880548,68900434,68902328,68907443,68909211,68919085,68927568,68930238,68974028,69022828,69040308,69083485	68843711,68860524,68863061,68867220,68875290,68878280,68880630,68900546,68902504,68907575,68909402,68919219,68928083,68930295,68974168,69022979,69040421,69085180	Gene ID= ENSG00000103047.7 TPM= 2.34 Transcript Type= protein_coding
chr16	69083096	69087343	69083096	69087343	-	transcript5259.chr16.nnic@NA	transcript5259.chr16.nnic	NA	69087103,69083096	69087343,69083855	Gene ID= novel_gene_chr16_5260 TPM= 4.67 Transcript Type= NA
chr16	69118010	69132570	69118010	69132570	-	ENST00000448552.6@CHTF8	ENST00000448552.6	protein_coding	69132484,69121436,69121053,69118010	69132570,69121493,69121170,69120649	Gene ID= ENSG00000168802.12 TPM= 106.25 Transcript Type= protein_coding
chr16	69132624	69169021	69132624	69169021	+	transcript5265.chr16.nnic@UTP4	transcript5265.chr16.nnic	protein_coding	69132624,69133458,69136696,69137801,69139825,69143178,69150537,69150813,69153584,69154393,69155871,69157084,69160356,69163083,69165341,69167075,69168882	69132689,69133618,69136887,69137885,69139914,69143389,69150708,69150904,69153680,69154457,69155993,69157240,69160462,69163178,69165526,69167123,69169021	Gene ID= ENSG00000141076.17 TPM= 14.01 Transcript Type= NA
chr16	69132596	69169020	69132596	69169020	+	ENST00000562237.5@UTP4	ENST00000562237.5	protein_coding	69132596,69133512,69136696,69137801,69139825,69143178,69150537,69150813,69153584,69154393,69155871,69157084,69160356,69163083,69165341,69167075,69168821	69132689,69133618,69136887,69137885,69139914,69143389,69150708,69150904,69153680,69154457,69155993,69157240,69160462,69163178,69165526,69167185,69169020	Gene ID= ENSG00000141076.17 TPM= 9.34 Transcript Type= protein_coding
chr16	69187121	69325046	69187121	69325046	+	transcript5290.chr16.nic@AC026464.4	transcript5290.chr16.nic	protein_coding	69187121,69245602,69260050,69270143,69284048,69299590,69316008,69316225,69318650,69318823,69319387,69320141,69320688,69321051,69322560,69324208	69187746,69245815,69260260,69270285,69284244,69299774,69316119,69316372,69318711,69318942,69319543,69320289,69320769,69321270,69322700,69325046	Gene ID= ENSG00000260914.3 TPM= 19.27 Transcript Type= NA
chr16	69187129	69309052	69187129	69309052	+	ENST00000336278.8@SNTB2	ENST00000336278.8	protein_coding	69187129,69245602,69260050,69270143,69284048,69299590,69300832	69187746,69245815,69260260,69270285,69284244,69299774,69309052	Gene ID= ENSG00000168807.16 TPM= 33.86 Transcript Type= protein_coding
chr16	69187140	69191236	69187140	69191236	+	transcript5335.chr16.nnic@NA	transcript5335.chr16.nnic	NA	69187140	69191236	Gene ID= novel_gene_chr16_5336 TPM= 5.84 Transcript Type= NA
chr16	69311313	69325046	69311313	69325046	+	transcript5295.chr16.nic@VPS4A	transcript5295.chr16.nic	protein_coding	69311313,69316008,69316225,69318650,69318823,69319387,69320141,69320688,69321051,69324208	69311532,69316119,69316372,69318711,69318942,69319543,69320289,69320769,69322700,69325046	Gene ID= ENSG00000132612.15 TPM= 15.18 Transcript Type= NA
chr16	69332596	69339583	69332596	69339583	-	ENST00000562081.2@COG8	ENST00000562081.2	protein_coding	69339176,69336505,69334521,69332596	69339583,69336712,69335348,69332882	Gene ID= ENSG00000213380.14 TPM= 16.35 Transcript Type= protein_coding
chr16	69325595	69327234	69325595	69327234	+	transcript5337.chr16.nnic@NA	transcript5337.chr16.nnic	NA	69325595	69327234	Gene ID= novel_gene_chr16_5338 TPM= 5.84 Transcript Type= NA
chr16	69326913	69339667	69326913	69339667	-	ENST00000306875.8@COG8	ENST00000306875.8	protein_coding	69339176,69336505,69334521,69332714,69330813,69326913	69339667,69336712,69335348,69332882,69331095,69329179	Gene ID= ENSG00000272617.2 TPM= 9.34 Transcript Type= protein_coding
chr16	69328621	69339564	69328621	69339564	-	transcript5311.chr16.nnic@COG8	transcript5311.chr16.nnic	protein_coding	69339025,69336505,69334521,69332714,69330813,69328621	69339564,69336712,69335348,69332882,69331095,69329179	Gene ID= ENSG00000272617.2 TPM= 2.34 Transcript Type= NA
chr16	69333167	69339581	69333167	69339581	-	transcript5326.chr16.nic@COG8	transcript5326.chr16.nic	protein_coding	69339176,69336505,69333167	69339581,69336712,69335348	Gene ID= ENSG00000272617.2 TPM= 2.34 Transcript Type= NA
chr16	69328621	69330595	69328621	69330595	-	ENST00000288022.1@PDF	ENST00000288022.1	protein_coding	69329997,69328621	69330595,69329179	Gene ID= ENSG00000258429.1 TPM= 15.18 Transcript Type= protein_coding
chr16	69339430	69343111	69339430	69343111	+	ENST00000254940.9@NIP7	ENST00000254940.9	protein_coding	69339430,69340006,69340194,69341180,69341533	69339885,69340092,69340332,69341320,69343111	Gene ID= ENSG00000132603.13 TPM= 26.85 Transcript Type= protein_coding
chr16	69339797	69343104	69339797	69343104	+	ENST00000254941.6@NIP7	ENST00000254941.6	protein_coding	69339797,69340006,69340194,69341533	69339885,69340092,69340332,69343104	Gene ID= ENSG00000132603.13 TPM= 1.17 Transcript Type= protein_coding
chr16	69343248	69351809	69343248	69351809	-	ENST00000288025.3@TMED6	ENST00000288025.3	protein_coding	69351541,69349525,69347788,69343248	69351809,69349651,69347936,69343640	Gene ID= ENSG00000157315.4 TPM= 1.17 Transcript Type= protein_coding
chr16	69366436	69386029	69366436	69386029	-	transcript5349.chr16.nic@TERF2	transcript5349.chr16.nic	protein_coding	69385593,69385391,69384580,69372269,69370483,69368376,69366436	69386029,69385486,69384710,69372355,69370629,69368482,69367199	Gene ID= ENSG00000132604.10 TPM= 9.34 Transcript Type= NA
chr16	69355561	69385988	69355561	69385988	-	ENST00000254942.7@TERF2	ENST00000254942.7	protein_coding	69385593,69385391,69384580,69372269,69370483,69368376,69366807,69361404,69357518,69355561	69385988,69385486,69384710,69372355,69370629,69368482,69367199,69361489,69357561,69357056	Gene ID= ENSG00000132604.10 TPM= 16.35 Transcript Type= protein_coding
chr16	69424525	69466266	69424525	69466266	+	ENST00000512062.5@CYB5B	ENST00000512062.5	protein_coding	69424525,69447150,69448115,69459093,69462430	69424857,69447278,69448144,69459121,69466266	Gene ID= ENSG00000103018.16 TPM= 11.68 Transcript Type= protein_coding
chr16	69424619	69450238	69424619	69450238	+	ENST00000514123.5@CYB5B	ENST00000514123.5	protein_coding	69424619,69447150,69448115	69424857,69447278,69450238	Gene ID= ENSG00000103018.16 TPM= 2.34 Transcript Type= retained_intron
chr16	69709401	69726951	69709401	69726951	-	ENST00000320623.9@NQO1	ENST00000320623.9	protein_coding	69726433,69718370,69718123,69714964,69713028,69709401	69726951,69718534,69718253,69715077,69713129,69711281	Gene ID= ENSG00000181019.12 TPM= 32.11 Transcript Type= protein_coding
chr16	69709401	69726668	69709401	69726668	-	ENST00000379047.7@NQO1	ENST00000379047.7	protein_coding	69726433,69718370,69718123,69714964,69709401	69726668,69718534,69718253,69715077,69711281	Gene ID= ENSG00000181019.12 TPM= 2.92 Transcript Type= protein_coding
chr16	69741867	69754940	69741867	69754940	-	ENST00000268802.9@NOB1	ENST00000268802.9	protein_coding	69754848,69754594,69752241,69749559,69749213,69748918,69748232,69744873,69741867	69754940,69754726,69752371,69749630,69749338,69749118,69748329,69745017,69742601	Gene ID= ENSG00000141101.12 TPM= 42.03 Transcript Type= protein_coding
chr16	69762292	69941738	69762292	69941738	+	transcript5383.chr16.nic@WWP2	transcript5383.chr16.nic	protein_coding	69762292,69776189,69783032,69786996,69798682,69799174,69840126,69842024,69871804,69888039,69908761,69917709,69925430,69929448,69930130,69931152,69931509,69931802,69933970,69935853,69936312,69937118,69937548,69939027,69939341,69939841	69762391,69776241,69783152,69787080,69798829,69799295,69840263,69842120,69871931,69888249,69908850,69917883,69925484,69929529,69930258,69931227,69931580,69931890,69934129,69935986,69936452,69937238,69937652,69939123,69939413,69941738	Gene ID= ENSG00000198373.12 TPM= 16.02 Transcript Type= NA
chr16	69762292	69941738	69762292	69941738	+	transcript5384.chr16.nic@WWP2	transcript5384.chr16.nic	protein_coding	69762292,69776189,69786996,69798682,69799174,69840126,69842024,69871804,69888039,69908761,69917709,69925430,69929448,69930130,69931152,69931509,69931802,69933970,69935853,69936312,69937118,69937548,69939027,69939341,69939841	69762391,69776241,69787080,69798829,69799295,69840263,69842120,69871931,69888249,69908850,69917883,69925484,69929529,69930258,69931227,69931580,69931890,69934129,69935986,69936452,69937238,69937652,69939123,69939413,69941738	Gene ID= ENSG00000198373.12 TPM= 16.02 Transcript Type= NA
chr16	69762306	69941741	69762306	69941741	+	ENST00000359154.6@WWP2	ENST00000359154.6	protein_coding	69762306,69786996,69798682,69799174,69840126,69842024,69871804,69888039,69908761,69917709,69925430,69929448,69930130,69931152,69931509,69931802,69933970,69935853,69936312,69937118,69937548,69939027,69939341,69939841	69762391,69787080,69798829,69799295,69840263,69842120,69871931,69888249,69908850,69917883,69925484,69929529,69930258,69931227,69931580,69931890,69934129,69935986,69936452,69937238,69937652,69939123,69939413,69941741	Gene ID= ENSG00000198373.12 TPM= 21.27 Transcript Type= protein_coding
chr16	69762322	69941738	69762322	69941738	+	transcript5388.chr16.nnic@WWP2	transcript5388.chr16.nnic	protein_coding	69762322,69786996,69798682,69799159,69871813,69888039,69908761,69917709,69925430,69929448,69930130,69931152,69931509,69931802,69933970,69935853,69936312,69937118,69937548,69939027,69939341,69939841	69762391,69787080,69798829,69799190,69871931,69888249,69908850,69917883,69925484,69929529,69930258,69931227,69931580,69931890,69934129,69935986,69936452,69937238,69937652,69939123,69939413,69941738	Gene ID= ENSG00000198373.12 TPM= 10.57 Transcript Type= NA
chr16	69924990	69941738	69924990	69941738	+	ENST00000568684.1@WWP2	ENST00000568684.1	protein_coding	69924990,69929448,69930130,69931152,69931509,69931802,69933970,69935853,69936312,69937118,69937548,69939027,69939341,69939841	69925484,69929529,69930258,69931227,69931580,69931890,69934129,69935986,69936452,69937238,69937652,69939123,69939413,69941738	Gene ID= ENSG00000198373.12 TPM= 9.11 Transcript Type= protein_coding
chr16	69762292	69910250	69762292	69910250	+	transcript5392.chr16.nic@WWP2	transcript5392.chr16.nic	protein_coding	69762292,69776189,69786996,69798682,69799174,69840126,69842024,69871804,69888039,69908761	69762391,69776241,69787080,69798829,69799295,69840263,69842120,69871931,69888249,69910250	Gene ID= ENSG00000198373.12 TPM= 4.09 Transcript Type= NA
chr16	69762322	69910250	69762322	69910250	+	transcript5393.chr16.nic@WWP2	transcript5393.chr16.nic	protein_coding	69762322,69786996,69798682,69799174,69840126,69842024,69871804,69888039,69908761	69762391,69787080,69798829,69799295,69840263,69842120,69871931,69888249,69910250	Gene ID= ENSG00000198373.12 TPM= 4.67 Transcript Type= NA
chr16	69812479	69814551	69812479	69814551	-	transcript5395.chr16.nnic@NA	transcript5395.chr16.nnic	NA	69812479	69814551	Gene ID= novel_gene_chr16_5396 TPM= 2.34 Transcript Type= NA
chr16	69965409	69968472	69965409	69968472	+	transcript5398.chr16.nnic@NA	transcript5398.chr16.nnic	NA	69965409	69968472	Gene ID= novel_gene_chr16_5399 TPM= 2.34 Transcript Type= NA
chr16	69976297	70065870	69976297	70065870	-	transcript5408.chr16.nic@PDXDC2P-NPIPB14P	transcript5408.chr16.nic	processed_transcript	70065756,70042930,70042351,70038905,70036432,70034171,70031900,70030988,70024586,70023630,70023379,70021824,70018047,70014104,70011841,70010751,69996390,69996069,69990597,69986381,69982658,69982350,69978222,69976297	70065870,70043003,70042416,70038985,70036578,70034360,70031968,70031066,70024670,70023678,70023477,70021949,70018097,70014167,70011929,70010856,69996468,69996226,69990683,69986509,69982757,69982494,69978282,69978112	Gene ID= ENSG00000196696.12 TPM= 5.84 Transcript Type= NA
chr16	69976293	70015513	69976293	70015513	-	transcript5411.chr16.nic@PDXDC2P-NPIPB14P	transcript5411.chr16.nic	processed_transcript	70014104,70011841,70010751,69996390,69996069,69990597,69986381,69982658,69982350,69978222,69978077,69976293	70015513,70011929,70010856,69996468,69996226,69990683,69986509,69982757,69982494,69978282,69978112,69976732	Gene ID= ENSG00000196696.12 TPM= 2.34 Transcript Type= NA
chr16	69976293	69992740	69976293	69992740	-	transcript5414.chr16.nic@PDXDC2P-NPIPB14P	transcript5414.chr16.nic	processed_transcript	69990597,69986381,69982658,69982350,69978222,69978077,69976293	69992740,69986509,69982757,69982494,69978282,69978112,69976732	Gene ID= ENSG00000196696.12 TPM= 15.18 Transcript Type= NA
chr16	69976297	70065948	69976297	70065948	-	ENST00000531894.5@PDXDC2P-NPIPB14P	ENST00000531894.5	processed_transcript	70065756,70042930,70042351,70038905,70036432,70034171,70031900,70030988,70024586,70023630,70023379,70021824,70018047,70014104,70011841,70010751,69996390,69996069,69990597,69989956,69986381,69982658,69982350,69978077,69976811,69976297	70065948,70043003,70042416,70038985,70036578,70034360,70031968,70031066,70024670,70023678,70023477,70021949,70018097,70014167,70011929,70010856,69996468,69996226,69990683,69990208,69986509,69982757,69982494,69978112,69978003,69976732	Gene ID= ENSG00000196696.12 TPM= 3.5 Transcript Type= processed_transcript
chr16	69976297	69981637	69976297	69981637	-	transcript5417.chr16.nic@NPIPB14P	transcript5417.chr16.nic	transcribed_unprocessed_pseudogene	69978222,69976297	69981637,69978112	Gene ID= ENSG00000226232.8 TPM= 3.5 Transcript Type= NA
chr16	70246778	70251930	70246778	70251930	-	ENST00000435634.2@EXOSC6	ENST00000435634.2	protein_coding	70246778	70251930	Gene ID= ENSG00000223496.2 TPM= 22.18 Transcript Type= protein_coding
chr16	70252295	70289543	70252295	70289543	-	ENST00000261772.12@AARS	ENST00000261772.12	protein_coding	70289421,70282620,70276966,70276486,70271781,70270196,70269618,70268271,70267659,70265538,70264958,70262346,70261044,70258980,70258033,70255728,70254621,70253919,70253714,70253268,70252295	70289543,70282784,70277154,70276631,70271972,70270340,70269763,70268379,70267809,70265662,70265102,70262524,70261157,70259186,70258217,70255836,70254734,70254038,70253800,70253381,70252906	Gene ID= ENSG00000090861.15 TPM= 117.93 Transcript Type= protein_coding
chr16	70299053	70335283	70299053	70335283	+	ENST00000288071.10@DDX19B	ENST00000288071.10	protein_coding	70299053,70312609,70314902,70315969,70317496,70324585,70325574,70329292,70329831,70331722,70332968,70333521	70299354,70312657,70314955,70316104,70317588,70324687,70325688,70329469,70330068,70331884,70333159,70335283	Gene ID= ENSG00000157349.16 TPM= 19.85 Transcript Type= protein_coding
chr16	70299168	70333823	70299168	70333823	+	transcript5456.chr16.nic@DDX19B	transcript5456.chr16.nic	protein_coding	70299168,70314902,70315969,70317496,70324585,70325574,70329292,70329831,70331722,70332968,70333521	70299354,70314955,70316104,70317588,70324687,70325688,70329469,70330068,70331884,70333159,70333823	Gene ID= ENSG00000157349.16 TPM= 2.63 Transcript Type= NA
chr16	70299162	70333826	70299162	70333826	+	ENST00000393657.6@DDX19B	ENST00000393657.6	protein_coding	70299162,70315969,70317496,70324585,70325574,70329292,70329831,70331722,70332968,70333521	70299354,70316104,70317588,70324687,70325688,70329469,70330068,70331884,70333159,70333826	Gene ID= ENSG00000157349.16 TPM= 3.79 Transcript Type= protein_coding
chr16	70299142	70333972	70299142	70333972	+	ENST00000562519.5@DDX19B	ENST00000562519.5	protein_coding	70299142,70315969,70324585,70325574,70329292,70329831,70331722,70332968,70333521	70299354,70316104,70324687,70325688,70329469,70330068,70331884,70333159,70333972	Gene ID= ENSG00000157349.16 TPM= 1.46 Transcript Type= nonsense_mediated_decay
chr16	70299194	70333823	70299194	70333823	+	ENST00000355992.7@DDX19B	ENST00000355992.7	protein_coding	70299194,70312609,70314902,70315969,70324585,70325574,70329292,70329831,70331722,70332968,70333521	70299354,70312657,70314955,70316104,70324687,70325688,70329469,70330068,70331884,70333159,70333823	Gene ID= ENSG00000157349.16 TPM= 2.63 Transcript Type= protein_coding
chr16	70346829	70373383	70346829	70373383	+	ENST00000302243.11@DDX19A	ENST00000302243.11	protein_coding	70346829,70350557,70355485,70356112,70361418,70364543,70365017,70366085,70366624,70370223,70371372,70371925	70347048,70350605,70355535,70356247,70361510,70364645,70365131,70366262,70366861,70370385,70371563,70373383	Gene ID= ENSG00000168872.16 TPM= 65.39 Transcript Type= protein_coding
chr16	70454421	70480274	70454421	70480274	+	ENST00000288078.10@FUK	ENST00000288078.10	protein_coding	70454421,70463169,70463623,70465126,70466132,70466882,70467374,70467886,70468849,70469152,70470314,70470971,70471182,70472541,70472983,70474129,70474528,70474790,70475350,70475648,70478272,70478551,70479180,70479579	70454630,70463272,70463774,70465176,70466257,70466954,70467471,70467966,70468968,70469323,70470426,70471072,70471352,70472605,70473353,70474339,70474694,70475011,70475493,70475767,70478459,70478650,70479403,70480274	Gene ID= ENSG00000157353.16 TPM= 31.53 Transcript Type= protein_coding
chr16	70477358	70480274	70477358	70480274	+	ENST00000485034.1@FUK	ENST00000485034.1	protein_coding	70477358,70478551,70479579	70478459,70479403,70480274	Gene ID= ENSG00000157353.16 TPM= 5.84 Transcript Type= retained_intron
chr16	70480568	70523558	70480568	70523558	-	ENST00000564415.5@COG4	ENST00000564415.5	protein_coding	70523373,70519649,70517626,70515868,70514335,70512239,70509916,70509231,70508406,70500958,70497937,70497221,70496266,70490330,70483853,70482729,70482092,70481764,70481359,70480568	70523558,70519731,70517740,70516040,70514509,70512432,70510021,70509388,70508464,70501091,70498055,70497387,70496431,70490392,70483969,70482821,70482175,70481865,70481487,70481144	Gene ID= ENSG00000103051.18 TPM= 4.13 Transcript Type= nonsense_mediated_decay
chr16	70480569	70523565	70480569	70523565	-	ENST00000323786.9@COG4	ENST00000323786.9	protein_coding	70523373,70519649,70517626,70514335,70512239,70509916,70509231,70508406,70500958,70497937,70497221,70496266,70490330,70483853,70482729,70482092,70481764,70481359,70480569	70523565,70519731,70517740,70514509,70512432,70510021,70509388,70508464,70501091,70498055,70497387,70496431,70490392,70483969,70482821,70482175,70481865,70481487,70481144	Gene ID= ENSG00000103051.18 TPM= 140.74 Transcript Type= protein_coding
chr16	70480571	70523562	70480571	70523562	-	transcript5507.chr16.nic@COG4	transcript5507.chr16.nic	protein_coding	70523373,70519649,70517626,70514335,70512239,70509916,70508406,70500958,70497937,70497221,70496266,70490330,70483853,70482729,70482092,70481764,70481359,70480571	70523562,70519731,70517740,70514509,70512432,70510021,70509388,70501091,70498055,70497387,70496431,70490392,70483969,70482821,70482175,70481865,70481487,70481144	Gene ID= ENSG00000103051.18 TPM= 19.9 Transcript Type= NA
chr16	70480572	70523554	70480572	70523554	-	ENST00000393612.8@COG4	ENST00000393612.8	protein_coding	70523373,70519649,70517626,70514335,70512239,70509916,70509231,70508406,70500958,70497937,70497221,70496266,70483853,70482729,70482092,70481764,70481359,70480572	70523554,70519731,70517740,70514509,70512432,70510021,70509388,70508464,70501091,70498055,70497387,70496431,70483969,70482821,70482175,70481865,70481487,70481144	Gene ID= ENSG00000103051.18 TPM= 3.64 Transcript Type= protein_coding
chr16	70480571	70523539	70480571	70523539	-	ENST00000530314.5@COG4	ENST00000530314.5	protein_coding	70523373,70517626,70514335,70512239,70509916,70508406,70500958,70497937,70497221,70496266,70490330,70483853,70482729,70482092,70481764,70481359,70480571	70523539,70517740,70514509,70512432,70510021,70509388,70501091,70498055,70497387,70496431,70490392,70483969,70482821,70482175,70481865,70481487,70481144	Gene ID= ENSG00000103051.18 TPM= 3.55 Transcript Type= retained_intron
chr16	70523788	70577668	70523788	70577668	+	ENST00000302516.9@SF3B3	ENST00000302516.9	protein_coding	70523788,70526587,70528873,70530745,70532479,70535308,70538323,70539104,70541669,70544438,70548370,70554446,70555051,70556179,70556886,70560469,70561630,70563876,70565065,70565368,70567411,70568283,70569043,70570006,70571095,70571673	70523928,70526726,70529199,70530917,70532620,70535420,70538460,70539207,70541834,70544533,70548442,70554597,70555206,70556334,70557029,70560591,70561784,70564050,70565270,70565524,70567536,70568495,70569141,70570149,70571199,70577668	Gene ID= ENSG00000189091.12 TPM= 28.02 Transcript Type= protein_coding
chr16	70523788	70572299	70523788	70572299	+	transcript5526.chr16.nic@SF3B3	transcript5526.chr16.nic	protein_coding	70523788,70526587,70528873,70530745,70532479,70535308,70538323,70539104,70541669,70544438,70548370,70554446,70555051,70556179,70556886,70560469,70561630,70563876,70565065,70565368,70567411,70568283,70569043,70570006,70571095,70571673	70523928,70526726,70529199,70530917,70532620,70535420,70538460,70539207,70541834,70544533,70550678,70554597,70555206,70556334,70557029,70560591,70561784,70564050,70565270,70565524,70567536,70568495,70569141,70570149,70571199,70572299	Gene ID= ENSG00000189091.12 TPM= 4.67 Transcript Type= NA
chr16	70590295	70660682	70590295	70660682	+	transcript5531.chr16.nnic@IL34	transcript5531.chr16.nnic	protein_coding	70590295,70646548,70654538,70656602,70656963,70659618,70659997	70590400,70646975,70654671,70656679,70657121,70659753,70660682	Gene ID= ENSG00000157368.10 TPM= 2.34 Transcript Type= NA
chr16	70579895	70660682	70579895	70660682	+	ENST00000429149.6@IL34	ENST00000429149.6	protein_coding	70579895,70646548,70654538,70656602,70656960,70659618,70659997	70580049,70646975,70654671,70656679,70657121,70659753,70660682	Gene ID= ENSG00000157368.10 TPM= 2.34 Transcript Type= protein_coding
chr16	70730595	70801192	70730595	70801192	-	transcript5542.chr16.nic@VAC14	transcript5542.chr16.nic	protein_coding	70800797,70786215,70785702,70784776,70784113,70783445,70783033,70781869,70780790,70772109,70762881,70762540,70744423,70730595	70801192,70786365,70785869,70784838,70784220,70783554,70783139,70782003,70780939,70772172,70763025,70762605,70744579,70731627	Gene ID= ENSG00000103043.14 TPM= 5.84 Transcript Type= NA
chr16	70687441	70691049	70687441	70691049	-	ENST00000571759.1@VAC14	ENST00000571759.1	protein_coding	70687441	70691049	Gene ID= ENSG00000103043.14 TPM= 11.38 Transcript Type= processed_transcript
chr16	70687439	70801161	70687439	70801161	-	ENST00000261776.9@VAC14	ENST00000261776.9	protein_coding	70800797,70786215,70785702,70784776,70784113,70783445,70783033,70781869,70780790,70772109,70762881,70762540,70744423,70731495,70698637,70697139,70695544,70692821,70687439	70801161,70786365,70785869,70784838,70784220,70783554,70783139,70782003,70780939,70772172,70763025,70762605,70744579,70731627,70698811,70697257,70695623,70692971,70688090	Gene ID= ENSG00000103043.14 TPM= 102.46 Transcript Type= protein_coding
chr16	71282300	71289412	71282300	71289412	-	transcript5548.chr16.nnic@CMTR2	transcript5548.chr16.nnic	protein_coding	71289086,71288878,71282300	71289412,71288937,71285939	Gene ID= ENSG00000180917.17 TPM= 4.67 Transcript Type= NA
chr16	71282300	71289539	71282300	71289539	-	ENST00000434935.6@CMTR2	ENST00000434935.6	protein_coding	71289136,71288878,71282300	71289539,71288937,71285939	Gene ID= ENSG00000180917.17 TPM= 19.85 Transcript Type= protein_coding
chr16	71358716	71390438	71358716	71390438	+	ENST00000302628.8@CALB2	ENST00000302628.8	protein_coding	71358716,71372153,71374745,71377667,71382719,71383367,71383970,71384339,71384783,71385577,71389749	71358886,71372229,71374834,71377747,71382775,71383444,71384025,71384378,71384836,71385648,71390438	Gene ID= ENSG00000172137.18 TPM= 8.17 Transcript Type= protein_coding
chr16	71447597	71462239	71447597	71462239	-	transcript5563.chr16.nnic@ZNF23	transcript5563.chr16.nnic	protein_coding	71461659,71461154,71456764,71454042,71453243,71450590,71447597	71462239,71461169,71456828,71454168,71453350,71450715,71449885	Gene ID= ENSG00000167377.17 TPM= 2.72 Transcript Type= NA
chr16	71447597	71462759	71447597	71462759	-	ENST00000357254.8@ZNF23	ENST00000357254.8	protein_coding	71462210,71456764,71454042,71453243,71447597	71462759,71456828,71454218,71453350,71449882	Gene ID= ENSG00000167377.17 TPM= 1.55 Transcript Type= protein_coding
chr16	71447619	71456830	71447619	71456830	-	ENST00000358700.6@ZNF23	ENST00000358700.6	protein_coding	71456764,71454042,71453243,71450590,71447619	71456830,71454168,71453350,71450715,71449882	Gene ID= ENSG00000167377.17 TPM= 1.17 Transcript Type= protein_coding
chr16	71447636	71462252	71447636	71462252	-	ENST00000539742.5@ZNF23	ENST00000539742.5	protein_coding	71462210,71456764,71447636	71462252,71456828,71449885	Gene ID= ENSG00000167377.17 TPM= 1.17 Transcript Type= processed_transcript
chr16	71447597	71564940	71447597	71564940	-	transcript5558.chr16.nnic@ZNF19	transcript5558.chr16.nnic	protein_coding	71564893,71546277,71514004,71494954,71484589,71482016,71478879,71478228,71463546,71462210,71461869,71456764,71454042,71453243,71447597	71564940,71546333,71514157,71495018,71484748,71482143,71479005,71478341,71463648,71463148,71462004,71456828,71454168,71453350,71449885	Gene ID= ENSG00000157429.15 TPM= 2.72 Transcript Type= NA
chr16	71563653	71564938	71563653	71564938	-	ENST00000617615.1@ZNF19	ENST00000617615.1	protein_coding	71563653	71564938	Gene ID= ENSG00000157429.15 TPM= 1.17 Transcript Type= processed_transcript
chr16	71626161	71629680	71626161	71629680	+	ENST00000567566.1@MARVELD3	ENST00000567566.1	protein_coding	71626161,71629367	71626696,71629680	Gene ID= ENSG00000140832.9 TPM= 3.5 Transcript Type= protein_coding
chr16	71626187	71641965	71626187	71641965	+	ENST00000299952.4@MARVELD3	ENST00000299952.4	protein_coding	71626187,71629367,71640390	71626696,71629494,71641965	Gene ID= ENSG00000140832.9 TPM= 9.34 Transcript Type= protein_coding
chr16	71644928	71655416	71644928	71655416	-	transcript5573.chr16.nnic@PHLPP2	transcript5573.chr16.nnic	protein_coding	71655240,71652790,71644928	71655416,71653023,71650044	Gene ID= ENSG00000040199.18 TPM= 11.68 Transcript Type= NA
chr16	71665865	71723907	71665865	71723907	-	transcript5574.chr16.nnic@PHLPP2	transcript5574.chr16.nnic	protein_coding	71723769,71702598,71690519,71684476,71681751,71679389,71678755,71676447,71672262,71669275,71665865	71723907,71702731,71690709,71684601,71681905,71679535,71678985,71676649,71672322,71669370,71667333	Gene ID= ENSG00000040199.18 TPM= 2.34 Transcript Type= NA
chr16	71731883	71809150	71731883	71809150	-	transcript5579.chr16.nic@AP1G1	transcript5579.chr16.nic	protein_coding	71808763,71808505,71807801,71789279,71774468,71773221,71771156,71769623,71765489,71764646,71764350,71761512,71758808,71756019,71753833,71750210,71749894,71748251,71746588,71745473,71745144,71739234,71738942,71734609,71731883	71809150,71808677,71808150,71789482,71774592,71773362,71771252,71769699,71765584,71764726,71764448,71761567,71758921,71756159,71753887,71750332,71749983,71748378,71746692,71745614,71745270,71739341,71739102,71734707,71733159	Gene ID= ENSG00000166747.12 TPM= 2.92 Transcript Type= NA
chr16	71729000	71808833	71729000	71808833	-	transcript5584.chr16.nic@AP1G1	transcript5584.chr16.nic	protein_coding	71808505,71789279,71774468,71773221,71771156,71769623,71765489,71764646,71764350,71761512,71758808,71756019,71753833,71750210,71749894,71748251,71746588,71745473,71745144,71739234,71738942,71734609,71729000	71808833,71789482,71774592,71773362,71771252,71769699,71765584,71764726,71764448,71761567,71758921,71756159,71753887,71750332,71749983,71748378,71746692,71745614,71745270,71739341,71739102,71734707,71733159	Gene ID= ENSG00000166747.12 TPM= 9.34 Transcript Type= NA
chr16	71729000	71809201	71729000	71809201	-	ENST00000299980.8@AP1G1	ENST00000299980.8	protein_coding	71808763,71789279,71774468,71773221,71771156,71769623,71765489,71764646,71764350,71761512,71758808,71756019,71753833,71750210,71749894,71748251,71746588,71745473,71745144,71739234,71738942,71734609,71729000	71809201,71789482,71774592,71773362,71771252,71769699,71765584,71764726,71764448,71761567,71758921,71756159,71753887,71750332,71749983,71748378,71746692,71745614,71745270,71739341,71739102,71734707,71733159	Gene ID= ENSG00000166747.12 TPM= 28.02 Transcript Type= protein_coding
chr16	71765117	71768511	71765117	71768511	+	transcript5591.chr16.nnic@NA	transcript5591.chr16.nnic	NA	71765117	71768511	Gene ID= novel_gene_chr16_5592 TPM= 5.84 Transcript Type= NA
chr16	71845986	71929002	71845986	71929002	+	transcript5594.chr16.nic@IST1	transcript5594.chr16.nic	protein_coding	71845986,71848010,71883117,71885247,71894721,71915626,71916462,71917047,71920739,71921343,71922474,71923288,71924769,71927614	71846104,71848071,71883403,71885376,71894858,71915728,71916642,71917134,71920822,71921453,71922680,71923380,71924817,71929002	Gene ID= ENSG00000182149.20 TPM= 14.63 Transcript Type= NA
chr16	71895249	71931199	71895249	71931199	+	ENST00000378799.10@IST1	ENST00000378799.10	protein_coding	71895249,71915626,71916462,71917047,71920739,71921343,71922474,71923288,71924769,71927614	71895589,71915728,71916642,71917134,71920822,71921453,71922680,71923380,71924817,71931199	Gene ID= ENSG00000182149.20 TPM= 4.67 Transcript Type= protein_coding
chr16	71895495	71928974	71895495	71928974	+	transcript5604.chr16.nic@IST1	transcript5604.chr16.nic	protein_coding	71895495,71915626,71916462,71917047,71920739,71921343,71922474,71923288,71927614	71895589,71915728,71916642,71917134,71920822,71921453,71922680,71923384,71928974	Gene ID= ENSG00000182149.20 TPM= 9.87 Transcript Type= NA
chr16	71895495	71929002	71895495	71929002	+	transcript5606.chr16.nic@IST1	transcript5606.chr16.nic	protein_coding	71895495,71915626,71916462,71917047,71920739,71921343,71922474,71923288,71927614	71895589,71915728,71916642,71917134,71920822,71921453,71922680,71924817,71929002	Gene ID= ENSG00000182149.20 TPM= 21.11 Transcript Type= NA
chr16	71895543	71929010	71895543	71929010	+	ENST00000329908.12@IST1	ENST00000329908.12	protein_coding	71895543,71915626,71916462,71917047,71920739,71921343,71922474,71923288,71924773,71927614	71895589,71915728,71916642,71917134,71920822,71921453,71922680,71923380,71924817,71929010	Gene ID= ENSG00000182149.20 TPM= 187.43 Transcript Type= protein_coding
chr16	71895553	71929008	71895553	71929008	+	ENST00000378798.9@IST1	ENST00000378798.9	protein_coding	71895553,71915626,71916462,71917047,71920739,71921343,71922474,71924769,71927614	71895589,71915728,71916642,71917134,71920822,71921453,71922680,71924817,71929008	Gene ID= ENSG00000182149.20 TPM= 14.63 Transcript Type= protein_coding
chr16	71845991	71857333	71845991	71857333	+	ENST00000427980.6@ATXN1L	ENST00000427980.6	protein_coding	71845991,71848010,71849624	71846104,71848071,71857333	Gene ID= ENSG00000224470.7 TPM= 38.53 Transcript Type= protein_coding
chr16	71859680	71884190	71859680	71884190	-	ENST00000425432.5@ZNF821	ENST00000425432.5	protein_coding	71883908,71883211,71879907,71867912,71864903,71864138,71861776,71859680	71884190,71883273,71880023,71868037,71865048,71864242,71861942,71860672	Gene ID= ENSG00000102984.14 TPM= 7.01 Transcript Type= protein_coding
chr16	71859680	71884190	71859680	71884190	-	ENST00000611294.4@ZNF821	ENST00000611294.4	protein_coding	71883908,71883211,71879907,71867912,71864903,71864138,71859680	71884190,71883273,71880023,71868037,71865048,71864242,71860672	Gene ID= ENSG00000102984.14 TPM= 3.5 Transcript Type= protein_coding
chr16	71859685	71884183	71859685	71884183	-	transcript5623.chr16.nic@ZNF821	transcript5623.chr16.nic	protein_coding	71883908,71883211,71879907,71867912,71864138,71861776,71859685	71884183,71883273,71880023,71868037,71864242,71861942,71860672	Gene ID= ENSG00000102984.14 TPM= 3.5 Transcript Type= NA
chr16	72008744	72025416	72008744	72025416	+	ENST00000219240.8@DHODH	ENST00000219240.8	protein_coding	72008744,72012050,72014473,72017024,72021124,72022362,72023165,72023474,72024145	72008785,72012262,72014672,72017106,72021311,72022475,72023318,72023633,72025416	Gene ID= ENSG00000102967.11 TPM= 8.17 Transcript Type= protein_coding
chr16	72084853	72093651	72084853	72093651	-	ENST00000268483.7@TXNL4B	ENST00000268483.7	protein_coding	72093367,72090618,72088987,72084853	72093651,72090786,72089138,72086802	Gene ID= ENSG00000140830.8 TPM= 9.34 Transcript Type= protein_coding
chr16	72054595	72061054	72054595	72061054	+	ENST00000355906.9@HP	ENST00000355906.9	protein_coding	72054595,72056161,72056530,72057392,72058254,72059114,72060112	72054657,72056243,72056631,72057466,72058355,72059188,72061054	Gene ID= ENSG00000257017.8 TPM= 85.82 Transcript Type= protein_coding
chr16	72054592	72061055	72054592	72061055	+	ENST00000570083.5@HP	ENST00000570083.5	protein_coding	72054592,72056161,72058254,72059114,72060112	72054657,72056243,72058355,72059188,72061055	Gene ID= ENSG00000257017.8 TPM= 39.11 Transcript Type= protein_coding
chr16	72063224	72077246	72063224	72077246	+	ENST00000540303.6@HPR	ENST00000540303.6	protein_coding	72063224,72073892,72074284,72075145,72076303	72063260,72073977,72074385,72075219,72077246	Gene ID= ENSG00000261701.6 TPM= 5.84 Transcript Type= protein_coding
chr16	72093835	72112909	72093835	72112909	+	transcript5645.chr16.nic@DHX38	transcript5645.chr16.nic	protein_coding	72093835,72096139,72096822,72097677,72098645,72098927,72099204,72099732,72100436,72101086,72101500,72103074,72103602,72103946,72104486,72105027,72105232,72105517,72106005,72107340,72107645,72108227,72108473,72108800,72109415,72110956,72112413,72112625	72094051,72096480,72097009,72097781,72098792,72099045,72099280,72099887,72100597,72101193,72101612,72103211,72103788,72104131,72104626,72105137,72105348,72105624,72106117,72107548,72107799,72108382,72108607,72108925,72109510,72111077,72112529,72112909	Gene ID= ENSG00000140829.11 TPM= 4.9 Transcript Type= NA
chr16	72093562	72112912	72093562	72112912	+	ENST00000268482.7@DHX38	ENST00000268482.7	protein_coding	72093562,72096139,72096822,72097677,72098645,72098927,72099204,72099732,72100436,72101086,72101500,72103074,72103602,72103946,72104486,72105027,72105232,72105517,72106005,72107340,72107645,72108227,72108473,72108800,72109415,72110956,72112413	72094051,72096480,72097009,72097781,72098792,72099045,72099280,72099887,72100597,72101193,72101612,72103211,72103788,72104131,72104626,72105137,72105348,72105624,72106117,72107548,72107799,72108382,72108607,72108925,72109510,72111077,72112912	Gene ID= ENSG00000140829.11 TPM= 58.23 Transcript Type= protein_coding
chr16	72093788	72112909	72093788	72112909	+	transcript5648.chr16.nic@DHX38	transcript5648.chr16.nic	protein_coding	72093788,72096139,72096822,72097677,72098645,72098927,72099204,72099732,72100436,72101086,72101500,72103074,72103602,72103946,72105027,72105232,72105517,72106005,72107340,72107645,72108227,72108473,72108800,72109415,72110956,72112413,72112625	72094051,72096480,72097009,72097781,72098792,72099045,72099280,72099887,72100597,72101193,72101612,72103211,72103788,72104626,72105137,72105348,72105624,72106117,72107548,72107799,72108382,72108607,72108925,72109510,72111077,72112529,72112909	Gene ID= ENSG00000140829.11 TPM= 2.57 Transcript Type= NA
chr16	72093846	72112912	72093846	72112912	+	transcript5649.chr16.nnic@DHX38	transcript5649.chr16.nnic	protein_coding	72093846,72096139,72096822,72097677,72098645,72098927,72099204,72099732,72100436,72101086,72101500,72103074,72103602,72103946,72105027,72105232,72105517,72106005,72107340,72107645,72108227,72108473,72108800,72109415,72110956,72112413	72094051,72096480,72097009,72097781,72098792,72099045,72099280,72099887,72100597,72101193,72101612,72103211,72103788,72104626,72105137,72105348,72105624,72106104,72107548,72107799,72108382,72108607,72108925,72109510,72111077,72112912	Gene ID= ENSG00000140829.11 TPM= 9.19 Transcript Type= NA
chr16	73043977	73045801	73043977	73045801	+	transcript5668.chr16.nnic@NA	transcript5668.chr16.nnic	NA	73043977	73045801	Gene ID= novel_gene_chr16_5669 TPM= 4.67 Transcript Type= NA
chr16	74296775	74306288	74296775	74306288	+	ENST00000219313.8@PSMD7	ENST00000219313.8	protein_coding	74296775,74300115,74301052,74301555,74302212,74304303,74305289	74296988,74300206,74301144,74301652,74302292,74304394,74306288	Gene ID= ENSG00000103035.10 TPM= 70.06 Transcript Type= protein_coding
chr16	74330418	74331569	74330418	74331569	+	transcript5680.chr16.nnic@NA	transcript5680.chr16.nnic	NA	74330418	74331569	Gene ID= novel_gene_chr16_5681 TPM= 8.17 Transcript Type= NA
chr16	74447427	74607114	74447427	74607114	-	ENST00000205061.9@GLG1	ENST00000205061.9	protein_coding	74606657,74532121,74508839,74503531,74496441,74494760,74492957,74491001,74485796,74483023,74480241,74477396,74474546,74472349,74471173,74469985,74468946,74467756,74465676,74463356,74462488,74462094,74459682,74457874,74456649,74453171,74447427	74607114,74532153,74508925,74503746,74496644,74494831,74493140,74491215,74485917,74483124,74480394,74477533,74474632,74472411,74471286,74470073,74469063,74467848,74465813,74463479,74462630,74462195,74459789,74457994,74456755,74453334,74452131	Gene ID= ENSG00000090863.11 TPM= 33.86 Transcript Type= protein_coding
chr16	74451959	74607094	74451959	74607094	-	ENST00000422840.6@GLG1	ENST00000422840.6	protein_coding	74606657,74532121,74508839,74503531,74496441,74494760,74492957,74491001,74485796,74483023,74480241,74477396,74474546,74472349,74471173,74469985,74468946,74467756,74465676,74463356,74462488,74462094,74459682,74457874,74456649,74451959	74607094,74532153,74508925,74503746,74496644,74494831,74493140,74491215,74485917,74483124,74480394,74477533,74474632,74472411,74471286,74470073,74469063,74467848,74465813,74463479,74462630,74462195,74459789,74457994,74456755,74453334	Gene ID= ENSG00000090863.11 TPM= 100.41 Transcript Type= protein_coding
chr16	74621394	74666881	74621394	74666881	-	ENST00000361070.8@RFWD3	ENST00000361070.8	protein_coding	74666786,74660932,74651920,74649132,74644541,74644362,74637856,74636346,74632523,74630781,74628452,74626343,74621394	74666881,74661451,74652122,74649202,74644735,74644453,74637970,74636577,74632673,74630957,74628666,74626554,74624071	Gene ID= ENSG00000168411.13 TPM= 7.01 Transcript Type= protein_coding
chr16	74671855	74701155	74671855	74701155	-	transcript5713.chr16.nnic@MLKL	transcript5713.chr16.nnic	protein_coding	74700683,74695298,74692342,74691277,74685486,74682651,74678899,74675613,74675355,74674960,74671855	74701155,74695759,74692416,74691463,74685583,74682786,74678980,74675764,74675404,74675100,74672538	Gene ID= ENSG00000168404.12 TPM= 4.09 Transcript Type= NA
chr16	74671861	74700914	74671861	74700914	-	ENST00000308807.11@MLKL	ENST00000308807.11	protein_coding	74700453,74695298,74692342,74691277,74685486,74682651,74678899,74675613,74675355,74674960,74671861	74700914,74695759,74692416,74691463,74685583,74682786,74678980,74675764,74675404,74675100,74672538	Gene ID= ENSG00000168404.12 TPM= 19.27 Transcript Type= protein_coding
chr16	74712955	74774825	74712955	74774825	-	ENST00000219368.7@FA2H	ENST00000219368.7	protein_coding	74774486,74740023,74727244,74726225,74718988,74716347,74712955	74774825,74740115,74727386,74726331,74719160,74716599,74714269	Gene ID= ENSG00000103089.8 TPM= 3.5 Transcript Type= protein_coding
chr16	74871367	74985148	74871367	74985148	-	ENST00000262144.10@WDR59	ENST00000262144.10	protein_coding	74984964,74965773,74956475,74951458,74949718,74948519,74942738,74938150,74923926,74921947,74917929,74916127,74915870,74912198,74909822,74909501,74908908,74903947,74893679,74892484,74889703,74888169,74887683,74886270,74885653,74871367	74985148,74965822,74956610,74951543,74949798,74948556,74942826,74938266,74924003,74922103,74918008,74916259,74915994,74912362,74909917,74909657,74908977,74904100,74893812,74892565,74889815,74888319,74887755,74886396,74885795,74874444	Gene ID= ENSG00000103091.14 TPM= 1.17 Transcript Type= protein_coding
chr16	74873587	74985136	74873587	74985136	-	transcript5724.chr16.nnic@WDR59	transcript5724.chr16.nnic	protein_coding	74984964,74965773,74951458,74949718,74948519,74942738,74938150,74923926,74921947,74917929,74916127,74915870,74912198,74909822,74909501,74908908,74903947,74893679,74892484,74889703,74888169,74887683,74886270,74885653,74873587	74985136,74965822,74951543,74949798,74948556,74942826,74938266,74924003,74922103,74918008,74916259,74915994,74912362,74909917,74909657,74908977,74904100,74893812,74892565,74889815,74888319,74887755,74886396,74885795,74874444	Gene ID= ENSG00000103091.14 TPM= 5.84 Transcript Type= NA
chr16	74873587	74985136	74873587	74985136	-	transcript5725.chr16.nic@WDR59	transcript5725.chr16.nic	protein_coding	74984964,74965773,74956475,74951458,74949718,74948519,74942738,74938150,74923926,74921947,74917929,74916127,74915870,74912198,74909501,74908908,74903947,74893679,74892484,74889703,74888169,74887683,74886270,74885653,74873587	74985136,74965822,74956610,74951543,74949798,74948556,74942826,74938266,74924003,74922103,74918008,74916259,74915994,74912362,74909917,74908977,74904100,74893812,74892565,74889815,74888319,74887755,74886396,74885795,74874444	Gene ID= ENSG00000103091.14 TPM= 2.34 Transcript Type= NA
chr16	74908733	74985083	74908733	74985083	-	ENST00000616369.4@WDR59	ENST00000616369.4	protein_coding	74984964,74965773,74956475,74951458,74949718,74948519,74942738,74938150,74923926,74921947,74917929,74916127,74915870,74912198,74909822,74909501,74908733	74985083,74965822,74956610,74951543,74949798,74948556,74942826,74938266,74924003,74922103,74918008,74916259,74915994,74912362,74909917,74909657,74908977	Gene ID= ENSG00000103091.14 TPM= 2.34 Transcript Type= protein_coding
chr16	74999281	75108711	74999281	75108711	+	transcript5747.chr16.nic@ZNRF1	transcript5747.chr16.nic	protein_coding	74999281,75093572,75104784,75106482	75000095,75093667,75104889,75108711	Gene ID= ENSG00000186187.11 TPM= 3.5 Transcript Type= NA
chr16	75105383	75110713	75105383	75110713	+	ENST00000568844.1@ZNRF1	ENST00000568844.1	protein_coding	75105383	75110713	Gene ID= ENSG00000186187.11 TPM= 8.17 Transcript Type= retained_intron
chr16	75111896	75116771	75111896	75116771	-	ENST00000450168.2@LDHD	ENST00000450168.2	protein_coding	75116649,75115548,75115198,75114827,75114526,75113966,75113742,75113535,75112834,75112602,75111896	75116771,75115660,75115339,75114968,75114685,75114165,75113870,75113662,75112924,75112713,75112521	Gene ID= ENSG00000166816.13 TPM= 5.84 Transcript Type= protein_coding
chr16	75111860	75116767	75111860	75116767	-	ENST00000300051.8@LDHD	ENST00000300051.8	protein_coding	75116649,75115548,75115198,75114827,75114526,75113966,75113742,75113535,75112834,75112602,75111860	75116767,75115660,75115339,75114968,75114685,75114234,75113870,75113662,75112924,75112713,75112521	Gene ID= ENSG00000166816.13 TPM= 9.34 Transcript Type= protein_coding
chr16	75148524	75172236	75148524	75172236	+	transcript5751.chr16.nic@ZFP1	transcript5751.chr16.nic	protein_coding	75148524,75148901,75152909,75166770,75169253	75148643,75149267,75152966,75166896,75172236	Gene ID= ENSG00000184517.11 TPM= 2.34 Transcript Type= NA
chr16	75148582	75172236	75148582	75172236	+	ENST00000393430.6@ZFP1	ENST00000393430.6	protein_coding	75148582,75152909,75166770,75169253	75148662,75152966,75166896,75172236	Gene ID= ENSG00000184517.11 TPM= 2.34 Transcript Type= protein_coding
chr16	75229037	75251645	75229037	75251645	-	transcript5762.chr16.nnic@BCAR1	transcript5762.chr16.nnic	protein_coding	75251458,75242470,75237183,75236882,75234889,75233846,75229037	75251645,75243090,75237344,75236998,75235986,75233935,75230023	Gene ID= ENSG00000050820.16 TPM= 34.19 Transcript Type= NA
chr16	75229030	75251609	75229030	75251609	-	ENST00000162330.9@BCAR1	ENST00000162330.9	protein_coding	75251471,75242470,75237183,75236882,75234889,75233846,75229030	75251609,75243090,75237344,75236998,75235986,75233935,75230023	Gene ID= ENSG00000050820.16 TPM= 110.48 Transcript Type= protein_coding
chr16	75229103	75266007	75229103	75266007	-	ENST00000538440.6@BCAR1	ENST00000538440.6	protein_coding	75265825,75242470,75237183,75236882,75234889,75233846,75229103	75266007,75243090,75237344,75236998,75235986,75233935,75230023	Gene ID= ENSG00000050820.16 TPM= 3.74 Transcript Type= protein_coding
chr16	75245994	75250077	75245994	75250077	-	ENST00000624205.1@AC009078.3	ENST00000624205.1	TEC	75245994	75250077	Gene ID= ENSG00000280152.1 TPM= 4.67 Transcript Type= TEC
chr16	75263875	75265967	75263875	75265967	-	transcript5775.chr16.nnic@NA	transcript5775.chr16.nnic	NA	75263875	75265967	Gene ID= novel_gene_chr16_5776 TPM= 4.67 Transcript Type= NA
chr16	75293710	75433495	75293710	75433495	-	transcript5781.chr16.nic@CFDP1	transcript5781.chr16.nic	protein_coding	75433289,75412535,75411825,75395090,75305024,75293710	75433495,75412754,75411952,75395209,75305182,75294042	Gene ID= ENSG00000153774.8 TPM= 2.92 Transcript Type= NA
chr16	75379801	75433495	75379801	75433495	-	transcript5782.chr16.nnic@CFDP1	transcript5782.chr16.nnic	protein_coding	75433289,75414578,75412535,75411825,75395090,75379801	75433495,75414695,75412754,75411952,75395209,75380134	Gene ID= ENSG00000153774.8 TPM= 2.34 Transcript Type= NA
chr16	75293710	75433485	75293710	75433485	-	ENST00000283882.3@CFDP1	ENST00000283882.3	protein_coding	75433289,75414578,75412535,75411825,75395090,75305024,75293710	75433485,75414695,75412754,75411952,75395209,75305182,75294042	Gene ID= ENSG00000153774.8 TPM= 58.96 Transcript Type= protein_coding
chr16	75394682	75433461	75394682	75433461	-	ENST00000566901.5@CFDP1	ENST00000566901.5	protein_coding	75433289,75414578,75412535,75411825,75394682	75433461,75414695,75412754,75411952,75395209	Gene ID= ENSG00000153774.8 TPM= 3.5 Transcript Type= retained_intron
chr16	75443238	75464708	75443238	75464708	-	transcript5787.chr16.nnic@TMEM170A	transcript5787.chr16.nnic	protein_coding	75464468,75451669,75445960,75443238	75464708,75451839,75447688,75445572	Gene ID= ENSG00000166822.12 TPM= 4.67 Transcript Type= NA
chr16	75445693	75464431	75445693	75464431	-	transcript5792.chr16.nic@TMEM170A	transcript5792.chr16.nic	protein_coding	75464232,75451738,75445693	75464431,75451839,75447688	Gene ID= ENSG00000166822.12 TPM= 3.5 Transcript Type= NA
chr16	75445714	75464416	75445714	75464416	-	ENST00000569540.5@TMEM170A	ENST00000569540.5	protein_coding	75464232,75451669,75445714	75464416,75451839,75447688	Gene ID= ENSG00000166822.12 TPM= 3.5 Transcript Type= protein_coding
chr16	75447019	75464698	75447019	75464698	-	ENST00000561878.1@TMEM170A	ENST00000561878.1	protein_coding	75464468,75451669,75447019	75464698,75451839,75447688	Gene ID= ENSG00000166822.12 TPM= 1.17 Transcript Type= protein_coding
chr16	75536744	75556286	75536744	75556286	-	ENST00000258173.10@TMEM231	ENST00000258173.10	protein_coding	75556071,75555804,75545826,75545352,75542602,75541350,75536744	75556286,75555973,75545954,75545495,75542683,75541455,75540174	Gene ID= ENSG00000205084.10 TPM= 5.84 Transcript Type= protein_coding
chr16	75538136	75556268	75538136	75556268	-	ENST00000562410.5@TMEM231	ENST00000562410.5	protein_coding	75556071,75555804,75545826,75545352,75542602,75541350,75538136	75556268,75555973,75546077,75545495,75542683,75541455,75540174	Gene ID= ENSG00000205084.10 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr16	75538151	75556238	75538151	75556238	-	ENST00000568377.5@TMEM231	ENST00000568377.5	protein_coding	75555804,75545826,75545352,75542602,75541350,75538151	75556238,75545954,75545495,75542683,75541455,75540174	Gene ID= ENSG00000205084.10 TPM= 2.34 Transcript Type= protein_coding
chr16	75566351	75577881	75566351	75577881	+	ENST00000037243.6@GABARAPL2	ENST00000037243.6	protein_coding	75566351,75566852,75568037,75577279	75566520,75566907,75568209,75577881	Gene ID= ENSG00000034713.7 TPM= 112.09 Transcript Type= protein_coding
chr16	75599100	75623307	75599100	75623307	-	transcript5812.chr16.nic@ADAT1	transcript5812.chr16.nic	protein_coding	75623238,75622403,75620631,75620266,75618586,75617142,75612243,75608843,75608224,75603085,75599100	75623307,75622464,75620820,75620334,75618698,75617272,75612861,75608988,75608323,75603171,75600348	Gene ID= ENSG00000065457.10 TPM= 2.34 Transcript Type= NA
chr16	75599100	75623286	75599100	75623286	-	transcript5814.chr16.nic@ADAT1	transcript5814.chr16.nic	protein_coding	75622403,75620631,75620266,75618586,75617142,75612243,75608843,75608224,75603085,75599100	75623286,75620820,75620334,75618640,75617272,75612861,75608988,75608323,75603171,75600348	Gene ID= ENSG00000065457.10 TPM= 7.01 Transcript Type= NA
chr16	75627724	75647714	75627724	75647714	-	transcript5820.chr16.nnic@KARS	transcript5820.chr16.nnic	protein_coding	75647578,75645722,75641564,75640184,75636454,75635912,75635680,75634173,75631693,75631416,75631168,75630423,75629415,75628569,75627724	75647714,75645839,75641723,75640349,75636547,75636098,75635805,75634292,75631855,75631589,75631253,75630508,75629541,75628712,75627993	Gene ID= ENSG00000065427.14 TPM= 4.29 Transcript Type= NA
chr16	75627724	75648650	75627724	75648650	-	transcript5824.chr16.nic@KARS	transcript5824.chr16.nic	protein_coding	75648468,75641564,75640184,75636454,75635912,75635680,75634173,75631693,75631416,75631168,75630423,75629415,75628569,75627724	75648650,75641723,75640349,75636547,75636098,75635805,75634292,75631855,75631589,75631253,75630508,75629541,75628712,75627993	Gene ID= ENSG00000065427.14 TPM= 3.12 Transcript Type= NA
chr16	75627724	75647679	75627724	75647679	-	ENST00000302445.7@KARS	ENST00000302445.7	protein_coding	75647578,75641564,75640184,75636454,75635912,75635680,75634173,75631693,75631416,75631168,75630423,75629415,75628569,75627724	75647679,75641723,75640349,75636547,75636098,75635805,75634292,75631855,75631589,75631253,75630508,75629541,75628712,75627993	Gene ID= ENSG00000065427.14 TPM= 76.68 Transcript Type= protein_coding
chr16	75627770	75647648	75627770	75647648	-	ENST00000564578.5@KARS	ENST00000564578.5	protein_coding	75647578,75644283,75641564,75636454,75635912,75635680,75634173,75631693,75631416,75631168,75630423,75629415,75628569,75627770	75647648,75644462,75641723,75636547,75636098,75635805,75634292,75631855,75631589,75631253,75630508,75629541,75628712,75627993	Gene ID= ENSG00000065427.14 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr16	75647781	75651699	75647781	75651699	+	transcript5839.chr16.nnic@NA	transcript5839.chr16.nnic	NA	75647781	75651699	Gene ID= novel_gene_chr16_5840 TPM= 4.67 Transcript Type= NA
chr16	75647786	75657432	75647786	75657432	+	ENST00000300086.4@TERF2IP	ENST00000300086.4	protein_coding	75647786,75654273,75656207	75648552,75654397,75657432	Gene ID= ENSG00000166848.5 TPM= 196.16 Transcript Type= protein_coding
chr16	75647788	75649556	75647788	75649556	+	transcript5837.chr16.nnic@NA	transcript5837.chr16.nnic	NA	75647788	75649556	Gene ID= novel_gene_chr16_5838 TPM= 4.67 Transcript Type= NA
chr16	77190962	77200772	77190962	77200772	+	transcript5855.chr16.nic@MON1B	transcript5855.chr16.nic	protein_coding	77190962,77193451,77194335,77195535,77198108	77191633,77193777,77195154,77195682,77200772	Gene ID= ENSG00000103111.14 TPM= 4.87 Transcript Type= NA
chr16	77190962	77199636	77190962	77199636	+	transcript5857.chr16.nic@MON1B	transcript5857.chr16.nic	protein_coding	77190962,77193451,77195535,77198108	77191633,77195154,77195682,77199636	Gene ID= ENSG00000103111.14 TPM= 4.87 Transcript Type= NA
chr16	77190919	77202405	77190919	77202405	+	ENST00000248248.7@MON1B	ENST00000248248.7	protein_coding	77190919,77191476,77193451,77194335,77195535,77198108	77191258,77191633,77193777,77195154,77195682,77202405	Gene ID= ENSG00000103111.14 TPM= 7.2 Transcript Type= protein_coding
chr16	77722519	77742258	77722519	77742258	+	ENST00000437314.3@NUDT7	ENST00000437314.3	protein_coding	77722519,77725431,77741582	77722617,77725584,77742258	Gene ID= ENSG00000140876.11 TPM= 5.84 Transcript Type= protein_coding
chr16	77753188	77756717	77753188	77756717	+	transcript5867.chr16.nnic@NA	transcript5867.chr16.nnic	NA	77753188	77756717	Gene ID= novel_gene_chr16_5868 TPM= 2.34 Transcript Type= NA
chr16	78101348	78104106	78101348	78104106	-	transcript5873.chr16.nnic@NA	transcript5873.chr16.nnic	NA	78101348	78104106	Gene ID= novel_gene_chr16_5874 TPM= 9.34 Transcript Type= NA
chr16	78312383	78314229	78312383	78314229	-	transcript5875.chr16.nnic@NA	transcript5875.chr16.nnic	NA	78312383	78314229	Gene ID= novel_gene_chr16_5876 TPM= 2.34 Transcript Type= NA
chr16	78449899	78452832	78449899	78452832	-	transcript5877.chr16.nnic@NA	transcript5877.chr16.nnic	NA	78449899	78452832	Gene ID= novel_gene_chr16_5878 TPM= 2.34 Transcript Type= NA
chr16	78718095	78721795	78718095	78721795	-	transcript5879.chr16.nnic@NA	transcript5879.chr16.nnic	NA	78718095	78721795	Gene ID= novel_gene_chr16_5880 TPM= 2.34 Transcript Type= NA
chr16	79593838	79600714	79593838	79600714	-	ENST00000326043.4@MAF	ENST00000326043.4	protein_coding	79598785,79593838	79600714,79594553	Gene ID= ENSG00000178573.6 TPM= 3.5 Transcript Type= protein_coding
chr16	79596478	79600737	79596478	79600737	-	transcript5885.chr16.nnic@NA	transcript5885.chr16.nnic	NA	79596478	79600737	Gene ID= novel_gene_chr16_5886 TPM= 44.37 Transcript Type= NA
chr16	80975802	81006897	80975802	81006897	-	transcript5904.chr16.nic@CMC2	transcript5904.chr16.nic	protein_coding	81006734,80997314,80981806,80980770,80975802	81006897,80997429,80981877,80980879,80976179	Gene ID= ENSG00000103121.8 TPM= 11.68 Transcript Type= NA
chr16	80966448	81007114	80966448	81007114	-	ENST00000219400.7@CMC2	ENST00000219400.7	protein_coding	81006734,80997314,80981806,80966448	81007114,80997429,80981877,80976179	Gene ID= ENSG00000103121.8 TPM= 23.35 Transcript Type= protein_coding
chr16	81006498	81029322	81006498	81029322	+	ENST00000305850.9@CENPN	ENST00000305850.9	protein_coding	81006498,81011930,81014136,81017326,81017758,81020100,81022597,81024715,81026526,81028171,81028569	81007277,81012110,81014181,81017385,81017834,81020276,81022698,81024778,81026638,81028297,81029322	Gene ID= ENSG00000166451.13 TPM= 1.17 Transcript Type= protein_coding
chr16	81035818	81045177	81035818	81045177	+	transcript5917.chr16.nic@ATMIN	transcript5917.chr16.nic	protein_coding	81035818,81041356,81043161	81036206,81042480,81045177	Gene ID= ENSG00000166454.9 TPM= 2.34 Transcript Type= NA
chr16	81035847	81047358	81035847	81047358	+	ENST00000299575.4@ATMIN	ENST00000299575.4	protein_coding	81035847,81041356,81042281,81043161	81036206,81041481,81042480,81047358	Gene ID= ENSG00000166454.9 TPM= 17.51 Transcript Type= protein_coding
chr16	81074813	81077237	81074813	81077237	-	transcript5930.chr16.nnic@NA	transcript5930.chr16.nnic	NA	81074813	81077237	Gene ID= novel_gene_chr16_5931 TPM= 2.34 Transcript Type= NA
chr16	81081938	81096425	81081938	81096425	-	ENST00000315467.8@GCSH	ENST00000315467.8	protein_coding	81096131,81090601,81087601,81084463,81081938	81096425,81090680,81087664,81084594,81082963	Gene ID= ENSG00000140905.10 TPM= 5.84 Transcript Type= protein_coding
chr16	81082336	81096265	81082336	81096265	-	ENST00000564386.6@GCSH	ENST00000564386.6	protein_coding	81096131,81090601,81084463,81082336	81096265,81090680,81084594,81082963	Gene ID= ENSG00000140905.10 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr16	81314952	81390884	81314952	81390884	+	ENST00000568107.2@GAN	ENST00000568107.2	protein_coding	81314952,81351583,81354405,81356785,81357810,81362499,81363794,81364974,81365350,81377219,81377415	81315280,81351697,81354755,81357002,81357931,81362611,81363943,81365110,81365478,81377328,81390884	Gene ID= ENSG00000261609.5 TPM= 3.5 Transcript Type= protein_coding
chr16	81447238	81451217	81447238	81451217	-	transcript5936.chr16.nnic@NA	transcript5936.chr16.nnic	NA	81447238	81451217	Gene ID= novel_gene_chr16_5937 TPM= 8.17 Transcript Type= NA
chr16	81779258	81962693	81779258	81962693	+	ENST00000564138.5@PLCG2	ENST00000564138.5	protein_coding	81779258,81785943,81854444,81858263,81859116,81869214,81870852,81880910,81883269,81889172,81891472,81893709,81895807,81900612,81905403,81907685,81908416,81910520,81912597,81919484,81921198,81923485,81927082,81928558,81931497,81934429,81936169,81937758,81938801,81939892,81946175,81956695,81957956	81779424,81786182,81854587,81858356,81859163,81869298,81870935,81880953,81883341,81889273,81891590,81893794,81895927,81900780,81905507,81907774,81908591,81910720,81912716,81919664,81921269,81923594,81927178,81928624,81931654,81934531,81936378,81937903,81938915,81940059,81946263,81956879,81962693	Gene ID= ENSG00000197943.9 TPM= 41.45 Transcript Type= protein_coding
chr16	81889063	81958294	81889063	81958294	+	transcript5940.chr16.nic@PLCG2	transcript5940.chr16.nic	protein_coding	81889063,81891472,81893709,81895807,81900612,81905403,81907685,81908416,81910520,81912597,81919484,81921198,81923485,81927082,81928558,81931497,81934429,81936169,81937758,81938801,81939892,81946175,81956695,81957956	81889273,81891590,81893794,81895927,81900780,81905507,81907774,81908591,81910720,81912716,81919664,81921269,81923594,81927178,81928624,81931654,81934531,81936378,81937903,81938915,81940059,81946263,81956879,81958294	Gene ID= ENSG00000197943.9 TPM= 4.09 Transcript Type= NA
chr16	82148162	82170226	82148162	82170226	-	ENST00000258169.8@MPHOSPH6	ENST00000258169.8	protein_coding	82170125,82164082,82151424,82149309,82148162	82170226,82164194,82151514,82149403,82148863	Gene ID= ENSG00000135698.9 TPM= 22.18 Transcript Type= protein_coding
chr16	82148162	82170228	82148162	82170228	-	transcript5954.chr16.nic@MPHOSPH6	transcript5954.chr16.nic	protein_coding	82170125,82164082,82149309,82148162	82170228,82164194,82151514,82148863	Gene ID= ENSG00000135698.9 TPM= 2.34 Transcript Type= NA
chr16	82626803	83800640	82626803	83800640	+	ENST00000567109.5@CDH13	ENST00000567109.5	protein_coding	82626803,82858362,83032010,83125385,83217345,83344862,83486477,83602454,83670790,83678208,83748108,83779968,83783254,83795023	82627137,82858473,83032218,83125501,83217497,83345006,83486655,83602594,83670972,83678461,83748250,83780201,83783472,83800640	Gene ID= ENSG00000140945.16 TPM= 4.67 Transcript Type= protein_coding
chr16	82626970	83181094	82626970	83181094	+	ENST00000431540.7@CDH13	ENST00000431540.7	protein_coding	82626970,82858362,83032010,83125385,83180870	82627137,82858473,83032218,83125501,83181094	Gene ID= ENSG00000140945.16 TPM= 1.17 Transcript Type= protein_coding
chr16	83807843	83819737	83807843	83819737	+	ENST00000433866.6@HSBP1	ENST00000433866.6	protein_coding	83807843,83808680,83809305,83811421	83808121,83808746,83809425,83819737	Gene ID= ENSG00000230989.6 TPM= 54.88 Transcript Type= protein_coding
chr16	83899084	83966332	83899084	83966332	+	transcript5970.chr16.nnic@OSGIN1	transcript5970.chr16.nnic	protein_coding	83899084,83906987,83908126,83912218,83957640,83959260,83960569,83960981,83965062	83899672,83907099,83908282,83912367,83957738,83959396,83960760,83961072,83966332	Gene ID= ENSG00000140961.12 TPM= 9.92 Transcript Type= NA
chr16	83953222	83966332	83953222	83966332	+	ENST00000393306.5@OSGIN1	ENST00000393306.5	protein_coding	83953222,83957640,83959260,83960569,83960981,83965062	83953370,83957738,83959396,83960760,83961072,83966332	Gene ID= ENSG00000140961.12 TPM= 16.93 Transcript Type= protein_coding
chr16	83899126	83927026	83899126	83927026	+	ENST00000262430.5@MLYCD	ENST00000262430.5	protein_coding	83899126,83906987,83908126,83912218,83914956	83899672,83907099,83908282,83912367,83927026	Gene ID= ENSG00000103150.5 TPM= 3.5 Transcript Type= protein_coding
chr16	83968632	84002776	83968632	84002776	+	ENST00000305202.8@NECAB2	ENST00000305202.8	protein_coding	83968632,83972151,83978444,83980839,83981030,83990494,83994302,83994609,83997216,83998205,84000724,84001825,84002318	83968849,83972175,83978552,83980864,83981127,83990630,83994420,83994688,83997269,83998317,84000801,84001916,84002776	Gene ID= ENSG00000103154.9 TPM= 1.17 Transcript Type= protein_coding
chr16	84053766	84116906	84053766	84116906	-	ENST00000343411.7@MBTPS1	ENST00000343411.7	protein_coding	84116735,84101621,84099053,84095602,84093711,84093188,84091732,84090875,84087358,84084983,84081747,84074597,84070588,84069866,84068339,84067667,84066489,84065690,84063305,84060682,84059302,84056005,84053766	84116906,84102107,84099310,84095805,84093821,84093297,84091848,84090942,84087460,84085134,84081908,84074741,84070776,84070038,84068454,84067823,84066613,84065767,84063445,84060813,84059428,84056135,84054645	Gene ID= ENSG00000140943.16 TPM= 142.45 Transcript Type= protein_coding
chr16	84117051	84117571	84117051	84117571	+	ENST00000565382.1@AC040169.1	ENST00000565382.1	antisense_RNA	84117051	84117571	Gene ID= ENSG00000260018.1 TPM= 2.34 Transcript Type= antisense_RNA
chr16	84122281	84145212	84122281	84145212	-	transcript6005.chr16.nic@HSDL1	transcript6005.chr16.nic	protein_coding	84145080,84135544,84129986,84129548,84122281	84145212,84135605,84131327,84129775,84124728	Gene ID= ENSG00000103160.11 TPM= 3.5 Transcript Type= NA
chr16	84122146	84125204	84122146	84125204	-	ENST00000619773.1@HSDL1	ENST00000619773.1	protein_coding	84122146	84125204	Gene ID= ENSG00000103160.11 TPM= 1.17 Transcript Type= retained_intron
chr16	84122281	84145188	84122281	84145188	-	ENST00000219439.8@HSDL1	ENST00000219439.8	protein_coding	84145080,84135544,84131102,84129986,84129548,84122281	84145188,84135605,84131327,84130431,84129775,84124728	Gene ID= ENSG00000103160.11 TPM= 29.19 Transcript Type= protein_coding
chr16	84177855	84187058	84177855	84187058	-	transcript6013.chr16.nnic@TAF1C	transcript6013.chr16.nnic	protein_coding	84186901,84184851,84183697,84183410,84183244,84183076,84182202,84181942,84181746,84181592,84181328,84181043,84180170,84179946,84177855	84187058,84185060,84183778,84183507,84183333,84183149,84182440,84182058,84181863,84181663,84181463,84181186,84180328,84180083,84179851	Gene ID= ENSG00000103168.16 TPM= 7.11 Transcript Type= NA
chr16	84177855	84187057	84177855	84187057	-	transcript6015.chr16.nic@TAF1C	transcript6015.chr16.nic	protein_coding	84186901,84184851,84183697,84183410,84183244,84183076,84182202,84181942,84181746,84181592,84181328,84181043,84180170,84179946,84177855	84187057,84184989,84183778,84183507,84183333,84183149,84182440,84182058,84181863,84181663,84181463,84181186,84180344,84180083,84179851	Gene ID= ENSG00000103168.16 TPM= 9.2 Transcript Type= NA
chr16	84177855	84187058	84177855	84187058	-	transcript6023.chr16.nic@TAF1C	transcript6023.chr16.nic	protein_coding	84186901,84184851,84183697,84183410,84183244,84183076,84181942,84181746,84181592,84181328,84181043,84180170,84179946,84177855	84187058,84185060,84183778,84183507,84183333,84183149,84182440,84181863,84181663,84181463,84181186,84180344,84180083,84179851	Gene ID= ENSG00000103168.16 TPM= 6.87 Transcript Type= NA
chr16	84178379	84187058	84178379	84187058	-	transcript6044.chr16.nic@TAF1C	transcript6044.chr16.nic	protein_coding	84186901,84184851,84183697,84183410,84183244,84183076,84182202,84181746,84181328,84181043,84180170,84179946,84178379	84187058,84185060,84183778,84183507,84183333,84183149,84182440,84182058,84181663,84181186,84180344,84180083,84179851	Gene ID= ENSG00000103168.16 TPM= 4.6 Transcript Type= NA
chr16	84177854	84187020	84177854	84187020	-	ENST00000564774.5@TAF1C	ENST00000564774.5	protein_coding	84186901,84184851,84183697,84183410,84183244,84183076,84182202,84181942,84181746,84181328,84180170,84179946,84177854	84187020,84185060,84183778,84183507,84183333,84183149,84182440,84182058,84181863,84181663,84181186,84180083,84179851	Gene ID= ENSG00000103168.16 TPM= 23.46 Transcript Type= retained_intron
chr16	84177852	84187049	84177852	84187049	-	ENST00000341690.10@TAF1C	ENST00000341690.10	protein_coding	84186901,84184851,84183697,84183410,84183244,84183076,84182202,84181942,84181746,84181592,84181328,84181043,84180170,84179946,84177852	84187049,84184899,84183778,84183507,84183333,84183149,84182440,84182058,84181863,84181663,84181463,84181186,84180344,84180080,84179851	Gene ID= ENSG00000103168.16 TPM= 10.27 Transcript Type= protein_coding
chr16	84177854	84187052	84177854	84187052	-	ENST00000564208.5@TAF1C	ENST00000564208.5	protein_coding	84186901,84184851,84183697,84183410,84183244,84183076,84182202,84181942,84181746,84181328,84181043,84180170,84179946,84177854	84187052,84184899,84183778,84183507,84183333,84183149,84182440,84182058,84181863,84181663,84181186,84180344,84180083,84179851	Gene ID= ENSG00000103168.16 TPM= 9.2 Transcript Type= retained_intron
chr16	84178712	84187039	84178712	84187039	-	ENST00000566732.5@TAF1C	ENST00000566732.5	protein_coding	84186901,84184851,84183697,84183410,84183244,84183076,84182202,84181942,84181746,84181592,84181328,84181043,84180170,84179946,84178712	84187039,84185060,84183778,84183507,84183333,84183149,84182440,84182058,84181863,84181663,84181463,84181186,84180344,84180083,84179851	Gene ID= ENSG00000103168.16 TPM= 2.42 Transcript Type= protein_coding
chr16	84294846	84329840	84294846	84329840	+	ENST00000568638.1@WFDC1	ENST00000568638.1	protein_coding	84294846,84312961,84318272,84319431,84324419,84326882,84329326	84295115,84313153,84318355,84319571,84324460,84326955,84329840	Gene ID= ENSG00000103175.10 TPM= 21.02 Transcript Type= protein_coding
chr16	84368534	84464002	84368534	84464002	+	transcript6084.chr16.nnic@ATP2C2	transcript6084.chr16.nnic	protein_coding	84368534,84398499,84405128,84408405,84410568,84410704,84415483,84422390,84422629,84423188,84425735,84439166,84439427,84440857,84442510,84446329,84448533,84451921,84453138,84453321,84454818,84459120,84459270,84460654,84461714,84461988,84463063	84368714,84398609,84405244,84408494,84410603,84410765,84415591,84422539,84422697,84423263,84425801,84439290,84439524,84440958,84442599,84446430,84448689,84452091,84453235,84453371,84454984,84459188,84459386,84460801,84461812,84462129,84464002	Gene ID= ENSG00000064270.12 TPM= 5.84 Transcript Type= NA
chr16	84396784	84464187	84396784	84464187	+	transcript6091.chr16.nnic@ATP2C2	transcript6091.chr16.nnic	protein_coding	84396784,84398499,84405128,84408405,84410568,84410704,84415483,84422390,84422629,84423188,84425735,84439166,84439427,84440857,84442510,84446329,84448533,84451921,84453138,84453321,84454818,84459120,84459270,84460654,84461714,84461988,84463614	84396901,84398609,84405244,84408494,84410603,84410765,84415591,84422539,84422697,84423263,84425801,84439290,84439524,84440958,84442599,84446430,84448689,84452091,84453235,84453371,84454984,84459188,84459386,84460801,84461812,84462129,84464187	Gene ID= ENSG00000064270.12 TPM= 11.29 Transcript Type= NA
chr16	84396856	84464000	84396856	84464000	+	transcript6094.chr16.nnic@ATP2C2	transcript6094.chr16.nnic	protein_coding	84396856,84398499,84405128,84408405,84410568,84410704,84415483,84422390,84422629,84423188,84425735,84439166,84439427,84440857,84442510,84446329,84448533,84451921,84453138,84453321,84454818,84459120,84459270,84460654,84461714,84461988,84463614	84396901,84398609,84405244,84408494,84410603,84410765,84415591,84422539,84422697,84423263,84425801,84439290,84439524,84440958,84442599,84446430,84448689,84452091,84453235,84453371,84454984,84459188,84459386,84461600,84461812,84462129,84464000	Gene ID= ENSG00000064270.12 TPM= 3.5 Transcript Type= NA
chr16	84368527	84464178	84368527	84464178	+	ENST00000262429.8@ATP2C2	ENST00000262429.8	protein_coding	84368527,84398499,84405128,84408405,84410568,84410704,84415483,84422390,84422629,84423188,84425735,84439166,84439427,84440857,84442510,84446329,84448533,84451921,84453138,84453321,84454818,84459120,84459270,84460654,84461714,84461988,84463614	84368714,84398609,84405244,84408494,84410603,84410765,84415591,84422539,84422697,84423263,84425801,84439290,84439524,84440958,84442599,84446430,84448689,84452091,84453235,84453371,84454984,84459188,84459386,84460801,84461812,84462129,84464178	Gene ID= ENSG00000064270.12 TPM= 31.14 Transcript Type= protein_coding
chr16	84368527	84464187	84368527	84464187	+	ENST00000416219.6@ATP2C2	ENST00000416219.6	protein_coding	84368527,84398499,84405128,84408405,84410568,84410704,84415483,84422390,84422629,84423188,84425735,84439166,84439427,84440857,84442510,84446329,84448533,84451921,84453138,84453321,84454818,84459120,84459270,84459506,84460654,84461714,84461988,84463614	84368714,84398609,84405244,84408494,84410603,84410765,84415591,84422539,84422697,84423263,84425801,84439290,84439524,84440958,84442599,84446430,84448689,84452091,84453235,84453371,84454984,84459188,84459386,84459592,84460801,84461812,84462129,84464187	Gene ID= ENSG00000064270.12 TPM= 4.29 Transcript Type= protein_coding
chr16	84436765	84438195	84436765	84438195	-	transcript6126.chr16.nnic@NA	transcript6126.chr16.nnic	NA	84436765	84438195	Gene ID= novel_gene_chr16_6127 TPM= 3.5 Transcript Type= NA
chr16	84478050	84504651	84478050	84504651	-	transcript6111.chr16.nnic@TLDC1	transcript6111.chr16.nnic	protein_coding	84504601,84502721,84497934,84495683,84489278,84486631,84482592,84480529,84479429,84478050	84504651,84502842,84498111,84495913,84489422,84487059,84482710,84480708,84480026,84479390	Gene ID= ENSG00000140950.15 TPM= 4.09 Transcript Type= NA
chr16	84477195	84504656	84477195	84504656	-	transcript6115.chr16.nnic@TLDC1	transcript6115.chr16.nnic	protein_coding	84504601,84497934,84495683,84489278,84486631,84482592,84480529,84477578,84477195	84504656,84498111,84495913,84489422,84487059,84482710,84480708,84480026,84477490	Gene ID= ENSG00000140950.15 TPM= 4.67 Transcript Type= NA
chr16	84478050	84504656	84478050	84504656	-	transcript6116.chr16.nnic@TLDC1	transcript6116.chr16.nnic	protein_coding	84504601,84497934,84495683,84489278,84486631,84482592,84480529,84479429,84478050	84504656,84498111,84495913,84489422,84487059,84482710,84480708,84480026,84479390	Gene ID= ENSG00000140950.15 TPM= 2.92 Transcript Type= NA
chr16	84476421	84504758	84476421	84504758	-	ENST00000343629.10@TLDC1	ENST00000343629.10	protein_coding	84504601,84497934,84495683,84489278,84486631,84482592,84480529,84476421	84504758,84498111,84495913,84489422,84487059,84482710,84480708,84480026	Gene ID= ENSG00000140950.15 TPM= 2.34 Transcript Type= protein_coding
chr16	84565594	84618080	84565594	84618080	-	transcript6129.chr16.nic@COTL1	transcript6129.chr16.nic	protein_coding	84617501,84590105,84565594	84618080,84590262,84566955	Gene ID= ENSG00000103187.7 TPM= 21.8 Transcript Type= NA
chr16	84565594	84618077	84565594	84618077	-	ENST00000262428.4@COTL1	ENST00000262428.4	protein_coding	84617838,84617501,84590105,84565594	84618077,84617583,84590262,84566955	Gene ID= ENSG00000103187.7 TPM= 478.33 Transcript Type= protein_coding
chr16	84616009	84617877	84616009	84617877	-	transcript6132.chr16.nnic@NA	transcript6132.chr16.nnic	NA	84616009	84617877	Gene ID= novel_gene_chr16_6133 TPM= 2.34 Transcript Type= NA
chr16	84648490	84662309	84648490	84662309	+	transcript6137.chr16.nic@KLHL36	transcript6137.chr16.nic	protein_coding	84648490,84650852,84656871,84659760,84661578	84648887,84650930,84657944,84659917,84662309	Gene ID= ENSG00000135686.12 TPM= 7.01 Transcript Type= NA
chr16	84648495	84662309	84648495	84662309	+	transcript6147.chr16.nic@KLHL36	transcript6147.chr16.nic	protein_coding	84648495,84650852,84656871,84661578	84648649,84650930,84659917,84662309	Gene ID= ENSG00000135686.12 TPM= 3.5 Transcript Type= NA
chr16	84657903	84662309	84657903	84662309	+	ENST00000564159.1@KLHL36	ENST00000564159.1	protein_coding	84657903,84659760,84661578	84659630,84659917,84662309	Gene ID= ENSG00000135686.12 TPM= 1.17 Transcript Type= retained_intron
chr16	84648525	84662314	84648525	84662314	+	ENST00000564996.5@KLHL36	ENST00000564996.5	protein_coding	84648525,84650852,84656871,84659760,84661578	84648649,84650930,84657944,84659917,84662314	Gene ID= ENSG00000135686.12 TPM= 32.69 Transcript Type= protein_coding
chr16	84723148	84727171	84723148	84727171	-	transcript6160.chr16.nnic@NA	transcript6160.chr16.nnic	NA	84723148	84727171	Gene ID= novel_gene_chr16_6161 TPM= 4.67 Transcript Type= NA
chr16	84819984	84909510	84819984	84909510	+	ENST00000262424.9@CRISPLD2	ENST00000262424.9	protein_coding	84819984,84838422,84845786,84849385,84850568,84854729,84866897,84868851,84872442,84872992,84873920,84877438,84880509,84889230,84906588	84820133,84838735,84845904,84849517,84850683,84854829,84867040,84868911,84872508,84873122,84873963,84877510,84880584,84889363,84909510	Gene ID= ENSG00000103196.11 TPM= 52.54 Transcript Type= protein_coding
chr16	84822407	84825794	84822407	84825794	+	transcript6164.chr16.nnic@NA	transcript6164.chr16.nnic	NA	84822407	84825794	Gene ID= novel_gene_chr16_6165 TPM= 2.34 Transcript Type= NA
chr16	84827875	84829089	84827875	84829089	+	transcript6166.chr16.nnic@NA	transcript6166.chr16.nnic	NA	84827875	84829089	Gene ID= novel_gene_chr16_6167 TPM= 2.34 Transcript Type= NA
chr16	84974460	85011488	84974460	85011488	-	transcript6181.chr16.nnic@ZDHHC7	transcript6181.chr16.nnic	protein_coding	85011286,84995922,84990304,84981870,84979189,84977924,84977095,84974460	85011488,84996007,84990635,84981994,84979322,84978005,84977225,84976519	Gene ID= ENSG00000153786.12 TPM= 10.22 Transcript Type= NA
chr16	84974460	85011522	84974460	85011522	-	ENST00000344861.9@ZDHHC7	ENST00000344861.9	protein_coding	85011286,84995922,84990304,84988763,84981870,84979189,84977924,84977095,84975413,84974460	85011522,84996007,84990635,84988873,84981994,84979285,84978005,84977225,84976519,84974878	Gene ID= ENSG00000153786.12 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr16	85027751	85094220	85027751	85094220	+	ENST00000538274.5@KIAA0513	ENST00000538274.5	protein_coding	85027751,85066900,85071783,85072925,85075844,85077425,85078415,85078925,85081315,85086644,85087072,85088276	85027858,85067400,85071882,85072998,85075914,85077632,85078455,85079003,85081392,85086724,85087166,85094220	Gene ID= ENSG00000135709.12 TPM= 52.54 Transcript Type= protein_coding
chr16	85027789	85030756	85027789	85030756	+	transcript6201.chr16.nnic@NA	transcript6201.chr16.nnic	NA	85027789	85030756	Gene ID= novel_gene_chr16_6202 TPM= 3.5 Transcript Type= NA
chr16	85170262	85309523	85170262	85309523	+	transcript6204.chr16.nnic@GSE1	transcript6204.chr16.nnic	protein_coding	85170262,85308162	85171807,85309523	Gene ID= ENSG00000131149.18 TPM= 3.5 Transcript Type= NA
chr16	85613216	85676204	85613216	85676204	+	ENST00000253458.11@GSE1	ENST00000253458.11	protein_coding	85613216,85633914,85648552,85654278,85654794,85655726,85656343,85657277,85661146,85662981,85663344,85665015,85665976,85668140,85670995,85672405	85613398,85634132,85648751,85654450,85654991,85655917,85656665,85657604,85661765,85663093,85663614,85665128,85666347,85668424,85671098,85676204	Gene ID= ENSG00000131149.18 TPM= 52.54 Transcript Type= protein_coding
chr16	85555806	85559539	85555806	85559539	-	transcript6214.chr16.nnic@NA	transcript6214.chr16.nnic	NA	85555806	85559539	Gene ID= novel_gene_chr16_6215 TPM= 3.5 Transcript Type= NA
chr16	85563191	85566560	85563191	85566560	-	transcript6212.chr16.nnic@NA	transcript6212.chr16.nnic	NA	85563191	85566560	Gene ID= novel_gene_chr16_6213 TPM= 10.51 Transcript Type= NA
chr16	85623217	85625218	85623217	85625218	-	transcript6216.chr16.nnic@NA	transcript6216.chr16.nnic	NA	85623217	85625218	Gene ID= novel_gene_chr16_6217 TPM= 4.67 Transcript Type= NA
chr16	85676198	85688999	85676198	85688999	-	ENST00000253462.7@GINS2	ENST00000253462.7	protein_coding	85688809,85687460,85681582,85678540,85676198	85688999,85687574,85681681,85678666,85678337	Gene ID= ENSG00000131153.8 TPM= 1.17 Transcript Type= protein_coding
chr16	85707517	85751091	85707517	85751091	-	ENST00000284245.8@C16orf74	ENST00000284245.8	protein_coding	85750926,85735190,85710164,85707517	85751091,85735235,85710307,85708066	Gene ID= ENSG00000154102.10 TPM= 3.5 Transcript Type= protein_coding
chr16	85707532	85751105	85707532	85751105	-	ENST00000602914.1@C16orf74	ENST00000602914.1	protein_coding	85750926,85735190,85707532	85751105,85735235,85708066	Gene ID= ENSG00000154102.10 TPM= 1.17 Transcript Type= protein_coding
chr16	85778624	85799540	85778624	85799540	-	ENST00000253457.7@EMC8	ENST00000253457.7	protein_coding	85799065,85788974,85781211,85780379,85778624	85799540,85789050,85781280,85780473,85779867	Gene ID= ENSG00000131148.8 TPM= 19.85 Transcript Type= protein_coding
chr16	85799697	85807002	85799697	85807002	+	ENST00000561569.5@COX4I1	ENST00000561569.5	protein_coding	85799697,85801184,85804937,85805733,85806738	85799752,85801278,85805104,85805864,85807002	Gene ID= ENSG00000131143.8 TPM= 26.27 Transcript Type= protein_coding
chr16	85898803	85922609	85898803	85922609	+	ENST00000268638.9@IRF8	ENST00000268638.9	protein_coding	85898803,85903015,85908990,85911570,85913131,85914473,85918417,85920109,85921106	85899223,85903189,85909173,85911658,85913236,85914520,85918803,85920224,85922609	Gene ID= ENSG00000140968.10 TPM= 142.45 Transcript Type= protein_coding
chr16	85899159	85922609	85899159	85922609	+	transcript6240.chr16.nic@IRF8	transcript6240.chr16.nic	protein_coding	85899159,85903015,85908990,85911570,85914473,85918417,85920109,85921106	85899223,85903189,85909173,85913236,85914520,85918803,85920224,85922609	Gene ID= ENSG00000140968.10 TPM= 5.84 Transcript Type= NA
chr16	85904814	85906700	85904814	85906700	-	transcript6245.chr16.nnic@NA	transcript6245.chr16.nnic	NA	85904814	85906700	Gene ID= novel_gene_chr16_6246 TPM= 4.67 Transcript Type= NA
chr16	86196181	86199720	86196181	86199720	+	ENST00000601250.1@LINC01082	ENST00000601250.1	lincRNA	86196181,86199512	86196412,86199720	Gene ID= ENSG00000269186.1 TPM= 4.67 Transcript Type= lincRNA
chr16	86474525	86508903	86474525	86508903	-	transcript6255.chr16.nnic@FENDRR	transcript6255.chr16.nnic	lincRNA	86508655,86490853,86490264,86478701,86476656,86474525	86508903,86491004,86490513,86478756,86477199,86476024	Gene ID= ENSG00000268388.5 TPM= 7.51 Transcript Type= NA
chr16	86474529	86508897	86474529	86508897	-	transcript6262.chr16.nnic@FENDRR	transcript6262.chr16.nnic	lincRNA	86508655,86490853,86490264,86478701,86477886,86474529	86508897,86491004,86490513,86478756,86478051,86477199	Gene ID= ENSG00000268388.5 TPM= 11.01 Transcript Type= NA
chr16	86474528	86508961	86474528	86508961	-	transcript6268.chr16.nnic@FENDRR	transcript6268.chr16.nnic	lincRNA	86508655,86490853,86490264,86478701,86474528	86508961,86491004,86490513,86478756,86477199	Gene ID= ENSG00000268388.5 TPM= 13.35 Transcript Type= NA
chr16	86474525	86508961	86474525	86508961	-	transcript6274.chr16.nic@FENDRR	transcript6274.chr16.nic	lincRNA	86508655,86490853,86490264,86474525	86508961,86491004,86490513,86477199	Gene ID= ENSG00000268388.5 TPM= 15.68 Transcript Type= NA
chr16	86487706	86508961	86487706	86508961	-	transcript6285.chr16.nic@FENDRR	transcript6285.chr16.nic	lincRNA	86508655,86490853,86487706	86508961,86491004,86490513	Gene ID= ENSG00000268388.5 TPM= 57.21 Transcript Type= NA
chr16	86483147	86484617	86483147	86484617	-	transcript6307.chr16.nnic@NA	transcript6307.chr16.nnic	NA	86483147	86484617	Gene ID= novel_gene_chr16_6308 TPM= 2.34 Transcript Type= NA
chr16	86491859	86496772	86491859	86496772	+	transcript6299.chr16.nnic@NA	transcript6299.chr16.nnic	NA	86491859	86496772	Gene ID= novel_gene_chr16_6300 TPM= 3.5 Transcript Type= NA
chr16	86503854	86508948	86503854	86508948	-	transcript6305.chr16.nnic@NA	transcript6305.chr16.nnic	NA	86503854	86508948	Gene ID= novel_gene_chr16_6306 TPM= 14.01 Transcript Type= NA
chr16	86510527	86515418	86510527	86515418	+	ENST00000262426.5@FOXF1	ENST00000262426.5	protein_coding	86510527,86512925	86511548,86515418	Gene ID= ENSG00000103241.6 TPM= 18.68 Transcript Type= protein_coding
chr16	86511373	86514348	86511373	86514348	+	transcript6297.chr16.nnic@NA	transcript6297.chr16.nnic	NA	86511373	86514348	Gene ID= novel_gene_chr16_6298 TPM= 7.01 Transcript Type= NA
chr16	86515786	86518995	86515786	86518995	+	transcript6303.chr16.nnic@NA	transcript6303.chr16.nnic	NA	86515786	86518995	Gene ID= novel_gene_chr16_6304 TPM= 2.34 Transcript Type= NA
chr16	86567251	86569728	86567251	86569728	+	ENST00000320354.5@FOXC2	ENST00000320354.5	protein_coding	86567251	86569728	Gene ID= ENSG00000176692.5 TPM= 3.5 Transcript Type= protein_coding
chr16	87216455	87219012	87216455	87219012	+	transcript6316.chr16.nnic@NA	transcript6316.chr16.nnic	NA	87216455	87219012	Gene ID= novel_gene_chr16_6317 TPM= 3.5 Transcript Type= NA
chr16	87302814	87383805	87302814	87383805	-	transcript6319.chr16.nic@FBXO31	transcript6319.chr16.nic	protein_coding	87383405,87360295,87347174,87343598,87342877,87336155,87335304,87333886,87315772,87314971,87305719,87302814	87383805,87360366,87347250,87343765,87342951,87336264,87335457,87334286,87315823,87315096,87305905,87303075	Gene ID= ENSG00000103264.17 TPM= 3.5 Transcript Type= NA
chr16	87329336	87383805	87329336	87383805	-	transcript6321.chr16.nic@FBXO31	transcript6321.chr16.nic	protein_coding	87383405,87360295,87358411,87347174,87343598,87342877,87336155,87335304,87333886,87329336	87383805,87360366,87358497,87347250,87343765,87342951,87336264,87335457,87334286,87331510	Gene ID= ENSG00000103264.17 TPM= 4.09 Transcript Type= NA
chr16	87329337	87383805	87329337	87383805	-	transcript6324.chr16.nnic@FBXO31	transcript6324.chr16.nnic	protein_coding	87383405,87360295,87347174,87343598,87342877,87336155,87335304,87334167,87329337	87383805,87360366,87347250,87343765,87342951,87336264,87335457,87334286,87331510	Gene ID= ENSG00000103264.17 TPM= 4.09 Transcript Type= NA
chr16	87326987	87383757	87326987	87383757	-	ENST00000311635.11@FBXO31	ENST00000311635.11	protein_coding	87383405,87360295,87347174,87343598,87342877,87336155,87335304,87333886,87326987	87383757,87360366,87347250,87343765,87342951,87336264,87335457,87334286,87331510	Gene ID= ENSG00000103264.17 TPM= 5.84 Transcript Type= protein_coding
chr16	87391800	87404779	87391800	87404779	+	ENST00000268607.9@MAP1LC3B	ENST00000268607.9	protein_coding	87391800,87398815,87402175,87402923	87392467,87398870,87402281,87404779	Gene ID= ENSG00000140941.12 TPM= 131.94 Transcript Type= protein_coding
chr16	87406257	87491859	87406257	87491859	-	ENST00000568020.5@ZCCHC14	ENST00000568020.5	protein_coding	87491669,87460008,87433128,87423810,87420607,87419783,87418847,87417460,87415276,87414414,87413055,87411516,87407678,87406257	87491859,87460131,87433201,87423881,87420716,87419877,87418901,87417742,87415367,87414541,87413195,87412976,87410335,87407014	Gene ID= ENSG00000140948.11 TPM= 8.17 Transcript Type= nonsense_mediated_decay
chr16	87406246	87492045	87406246	87492045	-	ENST00000268616.8@ZCCHC14	ENST00000268616.8	protein_coding	87491669,87460008,87433128,87423810,87420607,87419783,87418847,87417460,87415276,87414414,87413055,87411516,87406246	87492045,87460131,87433201,87423881,87420716,87419877,87418901,87417742,87415367,87414541,87413195,87412976,87410335	Gene ID= ENSG00000140948.11 TPM= 18.68 Transcript Type= protein_coding
chr16	87707812	87765991	87707812	87765991	-	transcript6346.chr16.nic@KLHDC4	transcript6346.chr16.nic	protein_coding	87765792,87761949,87756399,87755194,87748673,87730552,87726765,87714498,87711235,87709265,87708350,87707812	87765991,87762040,87756477,87755292,87748809,87730644,87726924,87714573,87711443,87709667,87708466,87708072	Gene ID= ENSG00000104731.13 TPM= 5.84 Transcript Type= NA
chr16	87707813	87765949	87707813	87765949	-	ENST00000270583.9@KLHDC4	ENST00000270583.9	protein_coding	87765792,87761949,87756399,87755194,87748673,87730552,87726765,87714498,87711235,87709265,87708350,87707813	87765949,87762040,87756477,87755292,87748809,87730644,87726924,87714573,87711443,87709667,87708466,87708075	Gene ID= ENSG00000104731.13 TPM= 21.02 Transcript Type= protein_coding
chr16	87951432	88077317	87951432	88077317	+	ENST00000286122.11@BANP	ENST00000286122.11	protein_coding	87951432,87975048,87981036,87984084,88004295,88006090,88018428,88027483,88033109,88035332,88037973,88065267,88072069,88076590	87951515,87975185,87981127,87984259,88004411,88006265,88018667,88027650,88033245,88035394,88038011,88065332,88072212,88077317	Gene ID= ENSG00000172530.20 TPM= 3.89 Transcript Type= protein_coding
chr16	87951432	88077317	87951432	88077317	+	transcript6360.chr16.nic@BANP	transcript6360.chr16.nic	protein_coding	87951432,87975048,87981036,87984060,88004295,88006090,88018428,88027483,88033109,88035323,88037973,88072069,88076590	87951515,87975185,87981127,87984259,88004411,88006265,88018667,88027650,88033245,88035394,88038011,88072212,88077317	Gene ID= ENSG00000172530.20 TPM= 6.22 Transcript Type= NA
chr16	87951434	88077318	87951434	88077318	+	ENST00000393208.6@BANP	ENST00000393208.6	protein_coding	87951434,87975048,87981036,87984060,88006090,88018428,88027483,88033109,88035323,88037973,88065267,88072069,88076590	87951515,87975185,87981127,87984259,88006265,88018667,88027650,88033245,88035394,88038011,88065332,88072212,88077318	Gene ID= ENSG00000172530.20 TPM= 3.89 Transcript Type= protein_coding
chr16	87951455	88077317	87951455	88077317	+	transcript6374.chr16.nnic@BANP	transcript6374.chr16.nnic	protein_coding	87951455,87981036,87984060,88006090,88018428,88027483,88033109,88035323,88037973,88072069,88076590	87951515,87981127,87984259,88006265,88018667,88027650,88033245,88035394,88038011,88072212,88077317	Gene ID= ENSG00000172530.20 TPM= 2.72 Transcript Type= NA
chr16	87951487	88077318	87951487	88077318	+	ENST00000355022.8@BANP	ENST00000355022.8	protein_coding	87951487,87975048,87981036,87984060,88006090,88018428,88027483,88033109,88035323,88037973,88072069,88076590	87951515,87975185,87981127,87984259,88006265,88018667,88027650,88033245,88035394,88038011,88072212,88077318	Gene ID= ENSG00000172530.20 TPM= 7.39 Transcript Type= protein_coding
chr16	87951617	87952750	87951617	87952750	+	transcript6379.chr16.nnic@NA	transcript6379.chr16.nnic	NA	87951617	87952750	Gene ID= novel_gene_chr16_6380 TPM= 2.34 Transcript Type= NA
chr16	88533933	88535164	88533933	88535164	+	transcript6382.chr16.nnic@NA	transcript6382.chr16.nnic	NA	88533933	88535164	Gene ID= novel_gene_chr16_6383 TPM= 9.34 Transcript Type= NA
chr16	88570381	88631966	88570381	88631966	+	ENST00000301011.9@ZC3H18	ENST00000301011.9	protein_coding	88570381,88577110,88586600,88598178,88598620,88599791,88608934,88611268,88622197,88623219,88623958,88624602,88625202,88627622,88627920,88628758,88630485,88631101	88570566,88577726,88586684,88598326,88598712,88599948,88609051,88611536,88622388,88623344,88624062,88624745,88625267,88627782,88628119,88628854,88630581,88631966	Gene ID= ENSG00000158545.15 TPM= 44.95 Transcript Type= protein_coding
chr16	88570403	88631398	88570403	88631398	+	ENST00000452588.6@ZC3H18	ENST00000452588.6	protein_coding	88570403,88577110,88586600,88587542,88598178,88598620,88599791,88608934,88611268,88622197,88623219,88623958,88624602,88625202,88627622,88627920,88628758,88630485,88631101	88570566,88577726,88586684,88587613,88598326,88598712,88599948,88609051,88611536,88622388,88623344,88624062,88624745,88625267,88627782,88628119,88628854,88630581,88631398	Gene ID= ENSG00000158545.15 TPM= 2.92 Transcript Type= protein_coding
chr16	88590566	88596378	88590566	88596378	-	transcript6394.chr16.nnic@NA	transcript6394.chr16.nnic	NA	88590566	88596378	Gene ID= novel_gene_chr16_6395 TPM= 7.01 Transcript Type= NA
chr16	88643283	88651152	88643283	88651152	-	ENST00000261623.7@CYBA	ENST00000261623.7	protein_coding	88650956,88648045,88647101,88646755,88646116,88643283	88651152,88648114,88647175,88646838,88646197,88643571	Gene ID= ENSG00000051523.10 TPM= 286.26 Transcript Type= protein_coding
chr16	88648939	88651053	88648939	88651053	-	transcript6435.chr16.nnic@NA	transcript6435.chr16.nnic	NA	88648939	88651053	Gene ID= novel_gene_chr16_6436 TPM= 12.84 Transcript Type= NA
chr16	88651935	88663152	88651935	88663152	-	transcript6400.chr16.nic@MVD	transcript6400.chr16.nic	protein_coding	88663011,88660748,88660520,88658650,88657915,88657436,88656105,88655656,88655199,88654692,88653300,88651935	88663152,88660841,88660637,88658720,88658029,88657582,88656304,88655730,88655417,88654807,88653408,88652605	Gene ID= ENSG00000167508.11 TPM= 40.38 Transcript Type= NA
chr16	88651935	88663170	88651935	88663170	-	transcript6415.chr16.nic@MVD	transcript6415.chr16.nic	protein_coding	88663011,88658650,88657436,88656105,88655656,88655199,88654692,88653300,88651935	88663170,88658720,88658029,88656304,88655730,88655417,88654807,88653408,88652605	Gene ID= ENSG00000167508.11 TPM= 25.2 Transcript Type= NA
chr16	88662102	88663161	88662102	88663161	-	ENST00000562741.1@MVD	ENST00000562741.1	protein_coding	88663011,88662102	88663161,88662167	Gene ID= ENSG00000167508.11 TPM= 1.17 Transcript Type= processed_transcript
chr16	88651935	88663110	88651935	88663110	-	ENST00000301012.7@MVD	ENST00000301012.7	protein_coding	88663011,88658650,88657915,88657436,88656105,88655656,88655199,88654692,88653300,88651935	88663110,88658720,88658029,88657582,88656304,88655730,88655417,88654807,88653408,88652605	Gene ID= ENSG00000167508.11 TPM= 133.78 Transcript Type= protein_coding
chr16	88662098	88663137	88662098	88663137	-	transcript6437.chr16.nnic@NA	transcript6437.chr16.nnic	NA	88662098	88663137	Gene ID= novel_gene_chr16_6438 TPM= 5.84 Transcript Type= NA
chr16	88665271	88676266	88665271	88676266	+	transcript6442.chr16.nnic@SNAI3-AS1	transcript6442.chr16.nnic	antisense_RNA	88665271,88671277,88671813,88673604,88675055	88667939,88671465,88672122,88673759,88676266	Gene ID= ENSG00000260630.6 TPM= 2.34 Transcript Type= NA
chr16	88677682	88686493	88677682	88686493	-	ENST00000332281.5@SNAI3	ENST00000332281.5	protein_coding	88686331,88681094,88677682	88686493,88681714,88678629	Gene ID= ENSG00000185669.5 TPM= 29.19 Transcript Type= protein_coding
chr16	88696502	88706426	88696502	88706426	-	transcript6445.chr16.nnic@RNF166	transcript6445.chr16.nnic	protein_coding	88706171,88701262,88700618,88699620,88698971,88698502,88696502	88706426,88701418,88700940,88699732,88699085,88698609,88697633	Gene ID= ENSG00000158717.10 TPM= 13.08 Transcript Type= NA
chr16	88696502	88706426	88696502	88706426	-	transcript6450.chr16.nic@RNF166	transcript6450.chr16.nic	protein_coding	88706171,88699620,88698971,88698502,88696502	88706426,88701418,88699085,88698609,88697633	Gene ID= ENSG00000158717.10 TPM= 14.24 Transcript Type= NA
chr16	88696495	88706421	88696495	88706421	-	ENST00000312838.8@RNF166	ENST00000312838.8	protein_coding	88706171,88701262,88699620,88698971,88698502,88696495	88706421,88701418,88699732,88699085,88698609,88697633	Gene ID= ENSG00000158717.10 TPM= 90.14 Transcript Type= protein_coding
chr16	88696536	88703617	88696536	88703617	-	ENST00000541206.6@RNF166	ENST00000541206.6	protein_coding	88702790,88701262,88699620,88698971,88698502,88696536	88703617,88701418,88699732,88699085,88698609,88697633	Gene ID= ENSG00000158717.10 TPM= 3.5 Transcript Type= protein_coding
chr16	88706463	88715386	88706463	88715386	+	ENST00000453996.6@CTU2	ENST00000453996.6	protein_coding	88706463,88707136,88709938,88710223,88711635,88712274,88712622,88713312,88713647,88714136,88714383,88714587,88714860,88715048,88715182	88706598,88707210,88710016,88710282,88711695,88712383,88712905,88713447,88713778,88714227,88714486,88714737,88714926,88715106,88715386	Gene ID= ENSG00000174177.12 TPM= 15.18 Transcript Type= protein_coding
chr16	88706500	88715386	88706500	88715386	+	transcript6463.chr16.nnic@CTU2	transcript6463.chr16.nnic	protein_coding	88706500,88709938,88710223,88711635,88712274,88712622,88713312,88713647,88714136,88714383,88714587,88714860,88715048,88715182	88706598,88710016,88710282,88711695,88712383,88712905,88713447,88713778,88714227,88714486,88714737,88714926,88715106,88715386	Gene ID= ENSG00000174177.12 TPM= 2.34 Transcript Type= NA
chr16	88706483	88715386	88706483	88715386	+	ENST00000312060.9@CTU2	ENST00000312060.9	protein_coding	88706483,88707136,88709938,88710223,88711635,88712274,88712622,88713312,88713647,88714136,88714383,88714587,88714860,88715182	88706598,88707210,88710016,88710282,88711695,88712383,88712905,88713447,88713778,88714227,88714486,88714737,88714926,88715386	Gene ID= ENSG00000174177.12 TPM= 2.34 Transcript Type= protein_coding
chr16	88708956	88714336	88708956	88714336	-	transcript6471.chr16.nnic@AC138028.6	transcript6471.chr16.nnic	antisense_RNA	88713319,88708956	88714336,88710709	Gene ID= ENSG00000278341.1 TPM= 3.5 Transcript Type= NA
chr16	88715346	88785211	88715346	88785211	-	ENST00000301015.13@PIEZO1	ENST00000301015.13	protein_coding	88784901,88749384,88742300,88742053,88741478,88738568,88738227,88737934,88737728,88737559,88736639,88736148,88735135,88734875,88734650,88734356,88733906,88733588,88733278,88732607,88732335,88731706,88727557,88727039,88726715,88726547,88726284,88725595,88725416,88725009,88723871,88723226,88723095,88722837,88722583,88722218,88721808,88721538,88721166,88720616,88720385,88720069,88719802,88719574,88717023,88716806,88716559,88716361,88716198,88715933,88715346	88785211,88749479,88742422,88742095,88741616,88738736,88738440,88738105,88737814,88737646,88736739,88736408,88735246,88735053,88734798,88734538,88734054,88733745,88733454,88732732,88732535,88731910,88727661,88727192,88726958,88726643,88726455,88725684,88725519,88725080,88723971,88723328,88723151,88723009,88722689,88722397,88722066,88721726,88721430,88720748,88720532,88720283,88719960,88719721,88717211,88716898,88716731,88716483,88716277,88716119,88715854	Gene ID= ENSG00000103335.21 TPM= 265.63 Transcript Type= protein_coding
chr16	88769244	88772790	88769244	88772790	+	transcript6472.chr16.nnic@NA	transcript6472.chr16.nnic	NA	88769244	88772790	Gene ID= novel_gene_chr16_6473 TPM= 22.18 Transcript Type= NA
chr16	88803213	88809258	88803213	88809258	+	ENST00000301019.8@CDT1	ENST00000301019.8	protein_coding	88803213,88804545,88804762,88805440,88805724,88806021,88806486,88807051,88807281,88808115	88804059,88804667,88804898,88805637,88805869,88806121,88806674,88807203,88807482,88809258	Gene ID= ENSG00000167513.8 TPM= 1.17 Transcript Type= protein_coding
chr16	88809469	88811958	88809469	88811958	-	transcript6498.chr16.nic@APRT	transcript6498.chr16.nic	protein_coding	88811820,88810070,88809469	88811958,88811656,88809840	Gene ID= ENSG00000198931.10 TPM= 10.51 Transcript Type= NA
chr16	88809469	88811925	88809469	88811925	-	ENST00000426324.6@APRT	ENST00000426324.6	protein_coding	88811820,88811550,88810423,88810070,88809469	88811925,88811656,88810556,88810148,88809706	Gene ID= ENSG00000198931.10 TPM= 14.59 Transcript Type= protein_coding
chr16	88809469	88811928	88809469	88811928	-	ENST00000567391.5@APRT	ENST00000567391.5	protein_coding	88811820,88811550,88810070,88809469	88811928,88811656,88810148,88809840	Gene ID= ENSG00000198931.10 TPM= 8.76 Transcript Type= nonsense_mediated_decay
chr16	88809518	88811897	88809518	88811897	-	ENST00000569616.1@APRT	ENST00000569616.1	protein_coding	88811820,88811550,88810423,88810070,88809518	88811897,88811656,88810556,88810148,88809907	Gene ID= ENSG00000198931.10 TPM= 1.17 Transcript Type= protein_coding
chr16	88811535	88814151	88811535	88814151	+	transcript6501.chr16.nnic@NA	transcript6501.chr16.nnic	NA	88811535	88814151	Gene ID= novel_gene_chr16_6502 TPM= 2.34 Transcript Type= NA
chr16	88813734	88856966	88813734	88856966	-	ENST00000268695.9@GALNS	ENST00000268695.9	protein_coding	88856758,88842706,88841897,88840992,88837622,88836201,88835725,88835213,88831998,88826702,88824767,88822589,88818007,88813734	88856966,88842829,88841971,88841094,88837765,88836267,88835849,88835352,88832101,88826838,88824869,88822710,88818124,88814525	Gene ID= ENSG00000141012.12 TPM= 70.64 Transcript Type= protein_coding
chr16	88813734	88856970	88813734	88856970	-	transcript6479.chr16.nnic@GALNS	transcript6479.chr16.nnic	protein_coding	88856758,88842706,88841897,88840992,88837622,88836201,88835725,88835213,88831998,88826702,88824767,88822589,88818007,88813734	88856970,88842829,88841971,88841094,88837765,88836267,88835849,88835352,88832101,88826838,88824869,88822710,88818124,88817417	Gene ID= ENSG00000141012.12 TPM= 7.01 Transcript Type= NA
chr16	88813734	88856961	88813734	88856961	-	transcript6481.chr16.nic@GALNS	transcript6481.chr16.nic	protein_coding	88856758,88841897,88840992,88837622,88836201,88835725,88835213,88831998,88826702,88824767,88822589,88818007,88813734	88856961,88841971,88841094,88837765,88836267,88835849,88835352,88832101,88826838,88824869,88822710,88818124,88814525	Gene ID= ENSG00000141012.12 TPM= 12.26 Transcript Type= NA
chr16	88813734	88856961	88813734	88856961	-	transcript6483.chr16.nnic@GALNS	transcript6483.chr16.nnic	protein_coding	88856758,88841897,88840992,88837622,88836201,88835725,88835213,88831998,88826702,88824767,88822589,88818007,88813734	88856961,88841971,88841094,88837765,88836267,88835849,88835352,88832101,88826838,88824869,88822710,88818124,88817417	Gene ID= ENSG00000141012.12 TPM= 8.17 Transcript Type= NA
chr16	88857086	88861112	88857086	88861112	+	transcript6508.chr16.nic@TRAPPC2L	transcript6508.chr16.nic	protein_coding	88857086,88858619,88859345,88859893,88860911	88857183,88858789,88859750,88859972,88861112	Gene ID= ENSG00000167515.10 TPM= 2.92 Transcript Type= NA
chr16	88857086	88862686	88857086	88862686	+	ENST00000301021.7@TRAPPC2L	ENST00000301021.7	protein_coding	88857086,88858619,88859663,88859893,88860911	88857183,88858791,88859750,88859972,88862686	Gene ID= ENSG00000167515.10 TPM= 16.93 Transcript Type= protein_coding
chr16	88857086	88862678	88857086	88862678	+	transcript6521.chr16.nic@TRAPPC2L	transcript6521.chr16.nic	protein_coding	88857086,88858619,88859893,88860914	88857183,88859750,88859972,88862678	Gene ID= ENSG00000167515.10 TPM= 2.92 Transcript Type= NA
chr16	88857086	88861112	88857086	88861112	+	transcript6523.chr16.nic@TRAPPC2L	transcript6523.chr16.nic	protein_coding	88857086,88858619,88860911	88857183,88859972,88861112	Gene ID= ENSG00000167515.10 TPM= 2.34 Transcript Type= NA
chr16	88857144	88861110	88857144	88861110	+	ENST00000564404.5@TRAPPC2L	ENST00000564404.5	protein_coding	88857144,88858619,88859345,88859893,88860893	88857183,88858789,88859750,88859972,88861110	Gene ID= ENSG00000167515.10 TPM= 2.92 Transcript Type= nonsense_mediated_decay
chr16	88875276	88941337	88875276	88941337	-	transcript6525.chr16.nic@CBFA2T3	transcript6525.chr16.nic	protein_coding	88941020,88901504,88898078,88892244,88891882,88885961,88885046,88882676,88881291,88880720,88879270,88875276	88941337,88901656,88898152,88892485,88891971,88886142,88885269,88882761,88881489,88880788,88879460,88877275	Gene ID= ENSG00000129993.14 TPM= 5.25 Transcript Type= NA
chr16	88874858	88977204	88874858	88977204	-	ENST00000268679.8@CBFA2T3	ENST00000268679.8	protein_coding	88976657,88901504,88898078,88892244,88891882,88885961,88885046,88882676,88881291,88880720,88879270,88874858	88977204,88901656,88898152,88892485,88891971,88886142,88885269,88882761,88881489,88880788,88879460,88877275	Gene ID= ENSG00000129993.14 TPM= 12.26 Transcript Type= protein_coding
chr16	88940067	88951524	88940067	88951524	+	transcript6533.chr16.nnic@AC092384.1	transcript6533.chr16.nnic	antisense_RNA	88940067,88950257,88951242	88940332,88951041,88951524	Gene ID= ENSG00000205018.2 TPM= 5.84 Transcript Type= NA
chr16	89093809	89155846	89093809	89155846	+	ENST00000614302.4@ACSF3	ENST00000614302.4	protein_coding	89093809,89098591,89100662,89102604,89112092,89114339,89120801,89133136,89145267,89145938,89154090	89093996,89098763,89101347,89102759,89112246,89114487,89120913,89133262,89145401,89146049,89155846	Gene ID= ENSG00000176715.15 TPM= 52.54 Transcript Type= protein_coding
chr16	89147567	89154586	89147567	89154586	+	ENST00000393145.5@ACSF3	ENST00000393145.5	protein_coding	89147567	89154586	Gene ID= ENSG00000176715.15 TPM= 15.18 Transcript Type= retained_intron
chr16	89093883	89154589	89093883	89154589	+	ENST00000406948.7@ACSF3	ENST00000406948.7	protein_coding	89093883,89100662,89102604,89112092,89114339,89120801,89133136,89145267,89145938,89154090	89093996,89101347,89102759,89112246,89114487,89120913,89133262,89145401,89146049,89154589	Gene ID= ENSG00000176715.15 TPM= 26.85 Transcript Type= protein_coding
chr16	89171767	89195492	89171767	89195492	+	ENST00000289746.2@CDH15	ENST00000289746.2	protein_coding	89171767,89179416,89180200,89183548,89185173,89187429,89188100,89190243,89191330,89191655,89192205,89193470,89193755,89194862	89171873,89179574,89180355,89183692,89185333,89187557,89188285,89190496,89191472,89191894,89192444,89193606,89193913,89195492	Gene ID= ENSG00000129910.7 TPM= 5.84 Transcript Type= protein_coding
chr16	89195761	89201709	89195761	89201709	-	transcript6560.chr16.nnic@SLC22A31	transcript6560.chr16.nnic	protein_coding	89201262,89199713,89199413,89199023,89198652,89198442,89198122,89197298,89195761	89201709,89199816,89199567,89199191,89198797,89198550,89198336,89197409,89196305	Gene ID= ENSG00000259803.6 TPM= 188.81 Transcript Type= NA
chr16	89195761	89201709	89195761	89201709	-	transcript6574.chr16.nnic@SLC22A31	transcript6574.chr16.nnic	protein_coding	89201262,89199713,89199413,89198652,89198442,89198122,89197298,89195761	89201709,89199816,89199567,89199191,89198550,89198336,89197409,89196305	Gene ID= ENSG00000259803.6 TPM= 39.85 Transcript Type= NA
chr16	89195761	89201709	89195761	89201709	-	transcript6587.chr16.nnic@SLC22A31	transcript6587.chr16.nnic	protein_coding	89201262,89199713,89198652,89198442,89198122,89197298,89195761	89201709,89199816,89199567,89198550,89198336,89197409,89196305	Gene ID= ENSG00000259803.6 TPM= 34.01 Transcript Type= NA
chr16	89195761	89201685	89195761	89201685	-	transcript6600.chr16.nic@SLC22A31	transcript6600.chr16.nic	protein_coding	89199713,89198652,89198442,89198122,89197298,89195761	89201685,89199567,89198550,89198336,89197409,89196305	Gene ID= ENSG00000259803.6 TPM= 18.84 Transcript Type= NA
chr16	89195761	89201629	89195761	89201629	-	transcript6619.chr16.nic@SLC22A31	transcript6619.chr16.nic	protein_coding	89198652,89195761	89201629,89198550	Gene ID= ENSG00000259803.6 TPM= 12.49 Transcript Type= NA
chr16	89215211	89217653	89215211	89217653	-	ENST00000570267.2@AC009113.1	ENST00000570267.2	antisense_RNA	89215211	89217653	Gene ID= ENSG00000259877.2 TPM= 4.67 Transcript Type= antisense_RNA
chr16	89217706	89228884	89217706	89228884	+	transcript6596.chr16.nic@ZNF778	transcript6596.chr16.nic	protein_coding	89217706,89220997,89223157,89224719,89225555,89226694	89217910,89221152,89223283,89224802,89225631,89228884	Gene ID= ENSG00000170100.13 TPM= 2.34 Transcript Type= NA
chr16	89267625	89270720	89267625	89270720	-	transcript6659.chr16.nnic@NA	transcript6659.chr16.nnic	NA	89267625	89270720	Gene ID= novel_gene_chr16_6660 TPM= 4.67 Transcript Type= NA
chr16	89285175	89490561	89285175	89490561	-	transcript6629.chr16.nic@ANKRD11	transcript6629.chr16.nic	protein_coding	89490245,89418284,89316933,89305206,89291013,89290625,89288528,89286039,89285564,89285175	89490561,89418368,89317075,89305344,89291183,89290828,89288670,89286186,89285649,89285562	Gene ID= ENSG00000167522.14 TPM= 2.34 Transcript Type= NA
chr16	89286663	89490596	89286663	89490596	-	transcript6636.chr16.nic@ANKRD11	transcript6636.chr16.nic	protein_coding	89490245,89418284,89316933,89305206,89291013,89290625,89286663	89490596,89418368,89317075,89305344,89291183,89290828,89288670	Gene ID= ENSG00000167522.14 TPM= 11.09 Transcript Type= NA
chr16	89298876	89490589	89298876	89490589	-	transcript6639.chr16.nic@ANKRD11	transcript6639.chr16.nic	protein_coding	89490245,89418284,89316933,89313317,89305206,89298876	89490589,89418368,89317078,89313589,89305344,89300962	Gene ID= ENSG00000167522.14 TPM= 3.89 Transcript Type= NA
chr16	89298876	89490580	89298876	89490580	-	transcript6643.chr16.nic@ANKRD11	transcript6643.chr16.nic	protein_coding	89490245,89418284,89316933,89305206,89298876	89490580,89418368,89317075,89305344,89300962	Gene ID= ENSG00000167522.14 TPM= 9.73 Transcript Type= NA
chr16	89267630	89490561	89267630	89490561	-	ENST00000301030.8@ANKRD11	ENST00000301030.8	protein_coding	89490245,89418284,89316933,89305206,89291013,89290625,89288528,89286039,89279072,89275093,89274814,89270817,89267630	89490561,89418368,89317078,89305344,89291183,89290828,89288670,89286186,89285649,89275191,89274957,89270909,89268663	Gene ID= ENSG00000167522.14 TPM= 19.85 Transcript Type= protein_coding
chr16	89295987	89299763	89295987	89299763	-	transcript6661.chr16.nnic@NA	transcript6661.chr16.nnic	NA	89295987	89299763	Gene ID= novel_gene_chr16_6662 TPM= 16.35 Transcript Type= NA
chr16	89382104	89384053	89382104	89384053	+	transcript6657.chr16.nnic@NA	transcript6657.chr16.nnic	NA	89382104	89384053	Gene ID= novel_gene_chr16_6658 TPM= 2.34 Transcript Type= NA
chr16	89404533	89406127	89404533	89406127	+	transcript6653.chr16.nnic@NA	transcript6653.chr16.nnic	NA	89404533	89406127	Gene ID= novel_gene_chr16_6654 TPM= 4.67 Transcript Type= NA
chr16	89482805	89485340	89482805	89485340	+	transcript6655.chr16.nnic@NA	transcript6655.chr16.nnic	NA	89482805	89485340	Gene ID= novel_gene_chr16_6656 TPM= 11.68 Transcript Type= NA
chr16	89520605	89557762	89520605	89557762	+	transcript6677.chr16.nic@SPG7	transcript6677.chr16.nic	protein_coding	89520605,89526329,89529477,89530683,89531904,89532463,89544648,89546658,89548003,89550494,89552979,89553794,89554486,89556887	89524247,89526468,89529579,89530808,89532066,89532636,89544772,89546760,89548113,89550609,89553135,89553960,89554563,89557762	Gene ID= ENSG00000197912.14 TPM= 5.57 Transcript Type= NA
chr16	89543348	89557762	89543348	89557762	+	transcript6685.chr16.nic@SPG7	transcript6685.chr16.nic	protein_coding	89543348,89546658,89548003,89550494,89552979,89553794,89554486,89556887	89544772,89546760,89548113,89550609,89553135,89553960,89554563,89557762	Gene ID= ENSG00000197912.14 TPM= 12.28 Transcript Type= NA
chr16	89508403	89557766	89508403	89557766	+	ENST00000268704.6@SPG7	ENST00000268704.6	protein_coding	89508403,89510490,89512948,89524006,89526329,89529477,89530683,89531904,89532463,89544648,89546658,89548003,89550494,89552979,89553794,89554486,89556887	89508600,89510592,89513037,89524247,89526468,89529579,89530808,89532066,89532636,89544772,89546760,89548113,89550609,89553135,89553960,89554563,89557766	Gene ID= ENSG00000197912.14 TPM= 116.67 Transcript Type= protein_coding
chr16	89508411	89537721	89508411	89537721	+	ENST00000341316.6@SPG7	ENST00000341316.6	protein_coding	89508411,89510490,89512948,89524006,89526329,89529477,89530683,89531904,89532463,89536765	89508600,89510592,89513037,89524247,89526468,89529579,89530808,89532066,89532636,89537721	Gene ID= ENSG00000197912.14 TPM= 8.17 Transcript Type= protein_coding
chr16	89560657	89566828	89560657	89566828	+	ENST00000311528.9@RPL13	ENST00000311528.9	protein_coding	89560657,89560940,89561227,89561578,89562335,89562884	89560712,89561063,89561368,89561751,89562391,89566828	Gene ID= ENSG00000167526.13 TPM= 865.35 Transcript Type= protein_coding
chr16	89560681	89563080	89560681	89563080	+	ENST00000567815.5@RPL13	ENST00000567815.5	protein_coding	89560681,89560954,89561227,89561578,89562335,89562884	89560712,89561063,89561368,89561751,89562391,89563080	Gene ID= ENSG00000167526.13 TPM= 56.5 Transcript Type= protein_coding
chr16	89560679	89563067	89560679	89563067	+	ENST00000484610.5@RPL13	ENST00000484610.5	protein_coding	89560679,89560940,89561227,89562335,89562884	89560712,89561063,89561751,89562391,89563067	Gene ID= ENSG00000167526.13 TPM= 9.8 Transcript Type= retained_intron
chr16	89560681	89563032	89560681	89563032	+	ENST00000563270.5@RPL13	ENST00000563270.5	protein_coding	89560681,89561227,89561578,89562335,89562884	89560712,89561368,89561751,89562391,89563032	Gene ID= ENSG00000167526.13 TPM= 1.33 Transcript Type= protein_coding
chr16	89560904	89563066	89560904	89563066	+	ENST00000399461.8@RPL13	ENST00000399461.8	protein_coding	89560904,89561578,89562335,89562884	89561368,89561751,89562391,89563066	Gene ID= ENSG00000167526.13 TPM= 12.13 Transcript Type= retained_intron
chr16	89575791	89597246	89575791	89597246	+	ENST00000319518.12@CPNE7	ENST00000319518.12	protein_coding	89575791,89577539,89583697,89584028,89584774,89585464,89585687,89586670,89587043,89588675,89589897,89591007,89591127,89595367,89596484	89576071,89577721,89583771,89584102,89584857,89585553,89585785,89586756,89587102,89588808,89589951,89591058,89591260,89595603,89597246	Gene ID= ENSG00000178773.14 TPM= 9.34 Transcript Type= protein_coding
chr16	89613636	89638430	89613636	89638430	+	transcript6704.chr16.nic@DPEP1	transcript6704.chr16.nic	protein_coding	89613636,89630305,89635908,89636264,89636533,89636866,89637204,89637468,89637632,89637836,89638052	89613719,89630514,89636040,89636396,89636683,89636935,89637380,89637552,89637707,89637971,89638430	Gene ID= ENSG00000015413.9 TPM= 2.34 Transcript Type= NA
chr16	89620592	89638429	89620592	89638429	+	ENST00000393092.7@DPEP1	ENST00000393092.7	protein_coding	89620592,89630305,89635908,89636264,89636533,89636866,89637204,89637468,89637632,89637836,89638052	89620776,89630514,89636040,89636396,89636683,89636935,89637380,89637552,89637707,89637971,89638429	Gene ID= ENSG00000015413.9 TPM= 2.34 Transcript Type= protein_coding
chr16	89644435	89657723	89644435	89657723	-	transcript6709.chr16.nnic@CHMP1A	transcript6709.chr16.nnic	protein_coding	89657582,89653904,89651569,89649351,89648072,89647203,89646527,89644435	89657723,89653923,89651646,89649497,89648478,89647609,89646714,89646087	Gene ID= ENSG00000131165.14 TPM= 20.43 Transcript Type= NA
chr16	89644431	89657845	89644431	89657845	-	ENST00000397901.7@CHMP1A	ENST00000397901.7	protein_coding	89657582,89653904,89651569,89649351,89647203,89646527,89644431	89657845,89653923,89651646,89649497,89647331,89646714,89646087	Gene ID= ENSG00000131165.14 TPM= 248.7 Transcript Type= protein_coding
chr16	89644463	89657709	89644463	89657709	-	ENST00000535997.6@CHMP1A	ENST00000535997.6	protein_coding	89657582,89651569,89649351,89647203,89646527,89644463	89657709,89651646,89649497,89647331,89646714,89646087	Gene ID= ENSG00000131165.14 TPM= 5.25 Transcript Type= protein_coding
chr16	89657829	89671272	89657829	89671272	+	ENST00000565890.1@SPATA33	ENST00000565890.1	protein_coding	89657829,89669286	89658209,89671272	Gene ID= ENSG00000167523.13 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr16	89658102	89661483	89658102	89661483	+	ENST00000568929.1@SPATA33	ENST00000568929.1	protein_coding	89658102,89660540	89658421,89661483	Gene ID= ENSG00000167523.13 TPM= 2.34 Transcript Type= protein_coding
chr16	89658047	89670456	89658047	89670456	+	ENST00000611218.1@SPATA33	ENST00000611218.1	protein_coding	89658047,89669286	89658421,89670456	Gene ID= ENSG00000167523.13 TPM= 2.34 Transcript Type= protein_coding
chr16	89686690	89696354	89686690	89696354	+	transcript6745.chr16.nic@CDK10	transcript6745.chr16.nic	protein_coding	89686690,89689252,89690553,89691443,89691806,89692449,89693274,89693398,89694173,89694931,89695293,89695595	89686797,89689324,89690624,89691545,89691887,89692516,89693326,89693467,89694788,89695070,89695345,89696354	Gene ID= ENSG00000185324.21 TPM= 4.26 Transcript Type= NA
chr16	89686680	89696354	89686680	89696354	+	transcript6747.chr16.nic@CDK10	transcript6747.chr16.nic	protein_coding	89686680,89689252,89690553,89691443,89691806,89692449,89693274,89694173,89694665,89694931,89695293,89695595	89686797,89689324,89690624,89691545,89691887,89692516,89693467,89694232,89694788,89695070,89695345,89696354	Gene ID= ENSG00000185324.21 TPM= 9.52 Transcript Type= NA
chr16	89686691	89696354	89686691	89696354	+	transcript6755.chr16.nic@CDK10	transcript6755.chr16.nic	protein_coding	89686691,89690553,89691443,89691806,89692449,89693274,89693398,89694173,89694665,89694931,89695293,89695595	89689324,89690624,89691545,89691887,89692516,89693326,89693467,89694232,89694788,89695070,89695345,89696354	Gene ID= ENSG00000185324.21 TPM= 4.26 Transcript Type= NA
chr16	89686677	89696354	89686677	89696354	+	transcript6766.chr16.nic@CDK10	transcript6766.chr16.nic	protein_coding	89686677,89689252,89690553,89691443,89691806,89692449,89693274,89694173,89694931,89695293,89695595	89686797,89689324,89690624,89691545,89691887,89692516,89693467,89694788,89695070,89695345,89696354	Gene ID= ENSG00000185324.21 TPM= 6.01 Transcript Type= NA
chr16	89686680	89696354	89686680	89696354	+	transcript6800.chr16.nic@CDK10	transcript6800.chr16.nic	protein_coding	89686680,89689252,89690553,89691443,89691806,89692449,89693274,89694931,89695293,89695595	89686797,89689324,89690624,89691545,89691887,89692516,89694788,89695070,89695345,89696354	Gene ID= ENSG00000185324.21 TPM= 10.1 Transcript Type= NA
chr16	89686692	89696354	89686692	89696354	+	transcript6822.chr16.nic@CDK10	transcript6822.chr16.nic	protein_coding	89686692,89690553,89691443,89691806,89692449,89693274,89694931,89695293,89695595	89686797,89690624,89691545,89691887,89692516,89694788,89695070,89695345,89696354	Gene ID= ENSG00000185324.21 TPM= 6.6 Transcript Type= NA
chr16	89686668	89696364	89686668	89696364	+	ENST00000353379.11@CDK10	ENST00000353379.11	protein_coding	89686668,89689252,89690553,89691443,89691806,89692449,89693274,89693398,89694173,89694665,89694931,89695293,89695595	89686797,89689324,89690624,89691545,89691887,89692516,89693326,89693467,89694232,89694788,89695070,89695345,89696364	Gene ID= ENSG00000185324.21 TPM= 21.08 Transcript Type= protein_coding
chr16	89696357	89701685	89696357	89701685	-	transcript6851.chr16.nnic@SPATA2L	transcript6851.chr16.nnic	protein_coding	89701628,89700930,89700423,89696357	89701685,89701233,89700576,89698305	Gene ID= ENSG00000158792.15 TPM= 5.25 Transcript Type= NA
chr16	89696343	89701695	89696343	89701695	-	ENST00000289805.9@SPATA2L	ENST00000289805.9	protein_coding	89701628,89700930,89696343	89701695,89701233,89698305	Gene ID= ENSG00000158792.15 TPM= 62.47 Transcript Type= protein_coding
chr16	89718703	89721339	89718703	89721339	-	transcript6856.chr16.nic@VPS9D1	transcript6856.chr16.nic	protein_coding	89720763,89718703	89721339,89719102	Gene ID= ENSG00000075399.13 TPM= 3.5 Transcript Type= NA
chr16	89721001	89738571	89721001	89738571	+	transcript6781.chr16.nic@ZNF276	transcript6781.chr16.nic	protein_coding	89721001,89722531,89723137,89723260,89727279,89729235,89733302,89733482,89733921,89737806,89737976	89721276,89722834,89723183,89723709,89727325,89729318,89733412,89733557,89734038,89737905,89738571	Gene ID= ENSG00000158805.11 TPM= 3.5 Transcript Type= NA
chr16	89720985	89740903	89720985	89740903	+	ENST00000289816.9@ZNF276	ENST00000289816.9	protein_coding	89720985,89722531,89723137,89723260,89727279,89729235,89733302,89733482,89733921,89737806,89737976	89721276,89722834,89723183,89723709,89727357,89729318,89733412,89733557,89734038,89737905,89740903	Gene ID= ENSG00000158805.11 TPM= 2.34 Transcript Type= protein_coding
chr16	89721542	89738571	89721542	89738571	+	transcript6796.chr16.nic@ZNF276	transcript6796.chr16.nic	protein_coding	89721542,89722531,89723137,89723279,89727279,89729235,89733302,89733482,89733921,89737806,89737976	89721845,89722834,89723183,89723709,89727325,89729318,89733412,89733557,89734038,89737905,89738571	Gene ID= ENSG00000158805.11 TPM= 2.34 Transcript Type= NA
chr16	89721000	89738571	89721000	89738571	+	transcript6808.chr16.nic@ZNF276	transcript6808.chr16.nic	protein_coding	89721000,89723137,89723260,89727279,89729235,89733302,89733482,89733921,89737806,89737976	89722834,89723183,89723709,89727325,89729318,89733412,89733557,89734038,89737905,89738571	Gene ID= ENSG00000158805.11 TPM= 3.5 Transcript Type= NA
chr16	89721964	89738571	89721964	89738571	+	transcript6842.chr16.nic@ZNF276	transcript6842.chr16.nic	protein_coding	89721964,89727279,89729235,89733302,89733482,89733921,89737806,89737976	89723709,89727325,89729318,89733412,89733557,89734038,89737905,89738571	Gene ID= ENSG00000158805.11 TPM= 2.34 Transcript Type= NA
chr16	89721964	89740903	89721964	89740903	+	transcript6848.chr16.nic@ZNF276	transcript6848.chr16.nic	protein_coding	89721964,89727279,89729235,89733302,89733921,89737806	89723709,89727325,89729318,89733557,89734038,89740903	Gene ID= ENSG00000158805.11 TPM= 2.34 Transcript Type= NA
chr16	89721573	89738571	89721573	89738571	+	ENST00000568295.5@ZNF276	ENST00000568295.5	protein_coding	89721573,89722531,89723137,89723260,89727279,89729235,89733302,89733482,89733921,89737806,89737976	89721845,89722834,89723183,89723709,89727325,89729318,89733412,89733557,89734038,89737905,89738571	Gene ID= ENSG00000158805.11 TPM= 7.01 Transcript Type= nonsense_mediated_decay
chr16	89721544	89738571	89721544	89738571	+	ENST00000443381.6@ZNF276	ENST00000443381.6	protein_coding	89721544,89722531,89723137,89723260,89727279,89729235,89733302,89733482,89733921,89737806,89737976	89721845,89722834,89723183,89723709,89727357,89729318,89733412,89733557,89734038,89737905,89738571	Gene ID= ENSG00000158805.11 TPM= 5.84 Transcript Type= protein_coding
chr16	89798385	89816635	89798385	89816635	-	ENST00000563673.5@FANCA	ENST00000563673.5	protein_coding	89816537,89815877,89814520,89810929,89810707,89808294,89805280,89803259,89799605,89798385	89816635,89815986,89814613,89811071,89810802,89808367,89805392,89803341,89799638,89799232	Gene ID= ENSG00000187741.14 TPM= 1.17 Transcript Type= protein_coding
chr16	89828508	89871319	89828508	89871319	+	ENST00000378247.7@SPIRE2	ENST00000378247.7	protein_coding	89828508,89845322,89850304,89854286,89854487,89855600,89856113,89858338,89859165,89860683,89863476,89863794,89868189,89869567,89870050	89828794,89845365,89850660,89854366,89854651,89855686,89856236,89858507,89859354,89860795,89863610,89863861,89868216,89869682,89871319	Gene ID= ENSG00000204991.10 TPM= 2.34 Transcript Type= protein_coding
chr16	89832994	89835248	89832994	89835248	-	transcript6864.chr16.nnic@NA	transcript6864.chr16.nnic	NA	89832994	89835248	Gene ID= novel_gene_chr16_6865 TPM= 2.34 Transcript Type= NA
chr16	89873572	89911379	89873572	89911379	+	transcript6869.chr16.nic@TCF25	transcript6869.chr16.nic	protein_coding	89873572,89883351,89884582,89885848,89887652,89892193,89893728,89895038,89895990,89898557,89898767,89900635,89904118,89904938,89906194,89907243,89908966,89910591,89911080	89873859,89883512,89884656,89885966,89887717,89892275,89893858,89895137,89896083,89898649,89898872,89900794,89904205,89905096,89906284,89907322,89909107,89910663,89911379	Gene ID= ENSG00000141002.19 TPM= 21.54 Transcript Type= NA
chr16	89873577	89911379	89873577	89911379	+	transcript6874.chr16.nic@TCF25	transcript6874.chr16.nic	protein_coding	89873577,89878461,89883351,89884582,89885848,89887652,89892193,89893728,89895038,89895990,89898557,89898767,89900635,89904118,89904938,89906194,89907243,89910591,89911080	89873859,89878627,89883512,89884656,89885966,89887717,89892275,89893858,89895137,89896083,89898649,89898872,89900794,89904205,89905096,89906284,89907322,89910663,89911379	Gene ID= ENSG00000141002.19 TPM= 6.76 Transcript Type= NA
chr16	89873585	89911379	89873585	89911379	+	transcript6880.chr16.nic@TCF25	transcript6880.chr16.nic	protein_coding	89873585,89883351,89884582,89885848,89887652,89892193,89893728,89895083,89895990,89898557,89898767,89900635,89904118,89904938,89906194,89907243,89910591,89911080	89873859,89883512,89884656,89885966,89887717,89892275,89893858,89895137,89896083,89898649,89898872,89900794,89904205,89905096,89906284,89907322,89910663,89911379	Gene ID= ENSG00000141002.19 TPM= 15.96 Transcript Type= NA
chr16	89873150	89911379	89873150	89911379	+	transcript6885.chr16.nic@TCF25	transcript6885.chr16.nic	protein_coding	89873150,89883351,89884582,89885848,89887652,89892193,89893728,89895990,89898557,89898767,89900635,89904118,89904938,89906194,89907243,89910591,89911080	89873859,89883512,89884656,89885966,89887717,89892275,89895137,89896083,89898649,89898872,89900794,89904205,89905096,89906284,89907322,89910663,89911379	Gene ID= ENSG00000141002.19 TPM= 8.37 Transcript Type= NA
chr16	89873612	89911384	89873612	89911384	+	ENST00000263346.12@TCF25	ENST00000263346.12	protein_coding	89873612,89883351,89884582,89885848,89887652,89892193,89893728,89895038,89895990,89898557,89898767,89900635,89904118,89904938,89906194,89907243,89910591,89911080	89873859,89883512,89884656,89885966,89887717,89892275,89893858,89895137,89896083,89898649,89898872,89900794,89904205,89905096,89906284,89907322,89910663,89911384	Gene ID= ENSG00000141002.19 TPM= 127.61 Transcript Type= protein_coding
chr16	89873586	89911384	89873586	89911384	+	ENST00000263347.11@TCF25	ENST00000263347.11	protein_coding	89873586,89883351,89884582,89885848,89887652,89892193,89893728,89895038,89895990,89898557,89898767,89900635,89904118,89904938,89906194,89907243,89908966,89910591,89911080	89873859,89883512,89884656,89885966,89887717,89892275,89893858,89895137,89896083,89898649,89898872,89900794,89904205,89905096,89906284,89907322,89909083,89910663,89911384	Gene ID= ENSG00000141002.19 TPM= 29.13 Transcript Type= protein_coding
chr16	89923279	89936097	89923279	89936097	+	ENST00000315491.11@TUBB3	ENST00000315491.11	protein_coding	89923279,89932571,89933468,89934729	89923458,89932679,89933578,89936097	Gene ID= ENSG00000258947.6 TPM= 2.34 Transcript Type= protein_coding
chr16	89947925	89968060	89947925	89968060	+	ENST00000563594.5@DEF8	ENST00000563594.5	protein_coding	89947925,89949417,89954243,89955169,89957511,89959014,89960931,89961737,89962012,89963363,89964170,89964466,89965861	89948814,89949513,89954376,89955266,89957660,89959155,89961095,89961864,89962125,89963443,89964310,89964575,89968060	Gene ID= ENSG00000140995.16 TPM= 38.44 Transcript Type= protein_coding
chr16	89948756	89968060	89948756	89968060	+	transcript6906.chr16.nic@DEF8	transcript6906.chr16.nic	protein_coding	89948756,89954243,89955169,89957511,89959014,89960931,89961737,89962012,89963363,89964170,89964466,89965861	89948814,89954376,89955266,89957660,89959155,89961095,89961864,89962125,89963443,89964310,89964575,89968060	Gene ID= ENSG00000140995.16 TPM= 18 Transcript Type= NA
chr16	89948756	89968060	89948756	89968060	+	transcript6907.chr16.nic@DEF8	transcript6907.chr16.nic	protein_coding	89948756,89954243,89955169,89957511,89959014,89960931,89961737,89962012,89963363,89964221,89964466,89965861	89948814,89954376,89955266,89957660,89959155,89961095,89961864,89962125,89963443,89964310,89964575,89968060	Gene ID= ENSG00000140995.16 TPM= 13.72 Transcript Type= NA
chr16	89949395	89968060	89949395	89968060	+	transcript6910.chr16.nic@DEF8	transcript6910.chr16.nic	protein_coding	89949395,89954243,89955169,89957511,89959014,89960931,89961737,89962012,89963363,89964170,89964466,89965861	89949513,89954376,89955266,89957660,89959155,89961095,89961864,89962125,89963443,89964310,89964575,89968060	Gene ID= ENSG00000140995.16 TPM= 16.25 Transcript Type= NA
chr16	89948731	89959363	89948731	89959363	+	ENST00000610455.4@DEF8	ENST00000610455.4	protein_coding	89948731,89954243,89955169,89957511,89959014	89948814,89954376,89955266,89957660,89959363	Gene ID= ENSG00000140995.16 TPM= 1.17 Transcript Type= protein_coding
chr16	89969791	89972534	89969791	89972534	-	ENST00000314994.4@CENPBD1	ENST00000314994.4	protein_coding	89969791	89972534	Gene ID= ENSG00000177946.5 TPM= 4.67 Transcript Type= protein_coding
chr16	89972597	89996610	89972597	89996610	+	transcript6922.chr16.nic@AFG3L1P	transcript6922.chr16.nic	transcribed_unitary_pseudogene	89972597,89977639,89978810,89980242,89981773,89984531,89988852,89990866,89992721,89993768,89994759	89972765,89977802,89978878,89980336,89981923,89984599,89988951,89991003,89992828,89993893,89996610	Gene ID= ENSG00000223959.8 TPM= 3.5 Transcript Type= NA
chr16	90004865	90019473	90004865	90019473	-	ENST00000002501.10@DBNDD1	ENST00000002501.10	protein_coding	90019311,90009284,90008784,90004865	90019473,90009430,90008924,90006492	Gene ID= ENSG00000003249.13 TPM= 23.35 Transcript Type= protein_coding
chr16	90019521	90044961	90019521	90044961	+	transcript6936.chr16.nic@GAS8	transcript6936.chr16.nic	protein_coding	90019521,90027636,90031176,90032718,90035633,90036381,90037232,90037762,90040300,90042470,90043196	90019768,90027722,90031496,90032924,90035687,90036586,90037399,90037848,90040509,90042535,90044961	Gene ID= ENSG00000141013.16 TPM= 6.07 Transcript Type= NA
chr16	90022600	90044971	90022600	90044971	+	ENST00000620723.4@GAS8	ENST00000620723.4	protein_coding	90022600,90027636,90031176,90032718,90035633,90036381,90037232,90037762,90040300,90042470,90043196	90022724,90027722,90031496,90032924,90035687,90036586,90037399,90037848,90040509,90042535,90044971	Gene ID= ENSG00000141013.16 TPM= 3.35 Transcript Type= protein_coding
chr16	90022600	90044971	90022600	90044971	+	ENST00000268699.8@GAS8	ENST00000268699.8	protein_coding	90022600,90027636,90031299,90032718,90035633,90036381,90037232,90037762,90040300,90042470,90043196	90022724,90027722,90031496,90032924,90035687,90036586,90037399,90037848,90040509,90042535,90044971	Gene ID= ENSG00000141013.16 TPM= 17.36 Transcript Type= protein_coding
chr16	90030508	90037735	90030508	90037735	+	transcript6953.chr16.nnic@GAS8	transcript6953.chr16.nnic	protein_coding	90030508,90032718,90036378	90031496,90032924,90037735	Gene ID= ENSG00000141013.16 TPM= 3.5 Transcript Type= NA
chr16	90022683	90044975	90022683	90044975	+	ENST00000566266.5@GAS8	ENST00000566266.5	protein_coding	90022683,90027636,90031176,90032718,90036381,90037232,90037762,90040300,90042470,90043196	90022724,90027722,90031496,90032924,90036586,90037399,90037848,90040509,90042535,90044975	Gene ID= ENSG00000141013.16 TPM= 2.18 Transcript Type= nonsense_mediated_decay
chr16	90137782	90166535	90137782	90166535	+	transcript6963.chr16.nnic@FAM157C	transcript6963.chr16.nnic	lincRNA	90137782,90143803,90146648,90155968,90159427,90162593,90163764,90166016,90166167	90138214,90143886,90146712,90156085,90159493,90162654,90163954,90166073,90166535	Gene ID= ENSG00000260528.4 TPM= 16.35 Transcript Type= NA
chr17	212502	352807	212502	352807	-	ENST00000331302.11@RPH3AL	ENST00000331302.11	protein_coding	352712,333759,327467,321272,319420,281768,247111,219623,215654,212502	352807,333934,327579,321415,319549,281854,247285,219736,215802,213923	Gene ID= ENSG00000181031.15 TPM= 1.46 Transcript Type= protein_coding
chr17	212502	386315	212502	386315	-	transcript13.chr17.nic@RPH3AL	transcript13.chr17.nic	protein_coding	386197,333759,327467,321272,319420,281768,247111,219623,215654,212502	386315,333934,327579,321415,319549,281854,247285,219736,215802,213923	Gene ID= ENSG00000181031.15 TPM= 3.79 Transcript Type= NA
chr17	212502	351263	212502	351263	-	transcript16.chr17.nnic@RPH3AL	transcript16.chr17.nnic	protein_coding	351133,327467,321272,319420,281768,247111,219623,215654,212502	351263,327579,321415,319549,281854,247285,219736,215802,213923	Gene ID= ENSG00000181031.15 TPM= 2.63 Transcript Type= NA
chr17	212502	352797	212502	352797	-	transcript17.chr17.nic@RPH3AL	transcript17.chr17.nic	protein_coding	352593,327467,321272,319420,281768,247111,219623,215654,212502	352797,327579,321415,319549,281854,247285,219736,215802,213923	Gene ID= ENSG00000181031.15 TPM= 2.63 Transcript Type= NA
chr17	212389	352842	212389	352842	-	ENST00000618002.4@RPH3AL	ENST00000618002.4	protein_coding	352712,327467,321272,319420,281768,247111,219623,215654,212389	352842,327579,321415,319549,281854,247285,219736,215802,213923	Gene ID= ENSG00000181031.15 TPM= 15.18 Transcript Type= protein_coding
chr17	410337	421097	410337	421097	+	ENST00000571106.1@C17orf97	ENST00000571106.1	protein_coding	410337,420672	410646,421097	Gene ID= ENSG00000187624.8 TPM= 1.17 Transcript Type= protein_coding
chr17	439978	445940	439978	445940	-	transcript32.chr17.nnic@RFLNB	transcript32.chr17.nnic	protein_coding	445836,443287,439978	445940,443494,442270	Gene ID= ENSG00000183688.4 TPM= 8.17 Transcript Type= NA
chr17	439978	445939	439978	445939	-	ENST00000329099.4@RFLNB	ENST00000329099.4	protein_coding	445836,439978	445939,443494	Gene ID= ENSG00000183688.4 TPM= 147.12 Transcript Type= protein_coding
chr17	667610	669606	667610	669606	+	transcript50.chr17.nnic@NA	transcript50.chr17.nnic	NA	667610	669606	Gene ID= novel_gene_chr17_51 TPM= 2.34 Transcript Type= NA
chr17	732412	742972	732412	742972	+	ENST00000308278.12@FAM57A	ENST00000308278.12	protein_coding	732412,733098,737846,740505,741301	732769,733181,738047,740600,742972	Gene ID= ENSG00000167695.14 TPM= 15.18 Transcript Type= protein_coding
chr17	744618	752806	744618	752806	-	transcript63.chr17.nnic@GEMIN4	transcript63.chr17.nnic	protein_coding	752618,744618	752806,748032	Gene ID= ENSG00000179409.10 TPM= 14.01 Transcript Type= NA
chr17	759330	782279	759330	782279	-	ENST00000301328.9@GLOD4	ENST00000301328.9	protein_coding	782166,780684,778622,776868,775775,771325,770421,770044,769869,759330	782279,780738,778661,776988,775919,771461,770507,770157,769955,760238	Gene ID= ENSG00000167699.13 TPM= 2.14 Transcript Type= protein_coding
chr17	759097	782341	759097	782341	-	ENST00000301329.10@GLOD4	ENST00000301329.10	protein_coding	782166,778695,776868,775775,771325,770421,770044,769869,759097	782341,778744,776988,775919,771461,770507,770157,769955,760238	Gene ID= ENSG00000167699.13 TPM= 65.39 Transcript Type= protein_coding
chr17	759452	779348	759452	779348	-	transcript88.chr17.nic@GLOD4	transcript88.chr17.nic	protein_coding	776868,775775,770044,769869,759452	779348,775919,771461,769955,760238	Gene ID= ENSG00000167699.13 TPM= 23.35 Transcript Type= NA
chr17	782273	792509	782273	792509	+	ENST00000304478.8@MRM3	ENST00000304478.8	protein_coding	782273,783083,787965,791534	782692,783327,788132,792509	Gene ID= ENSG00000171861.10 TPM= 12.84 Transcript Type= protein_coding
chr17	799313	979770	799313	979770	-	ENST00000336868.7@NXN	ENST00000336868.7	protein_coding	979319,825961,823632,822357,819439,805068,803682,799313	979770,826078,823765,822457,819545,805247,803806,801131	Gene ID= ENSG00000167693.16 TPM= 177.47 Transcript Type= protein_coding
chr17	997117	1003671	997117	1003671	+	ENST00000327158.4@TIMM22	ENST00000327158.4	protein_coding	997117,998779,999512,1001012	997380,998975,999584,1003671	Gene ID= ENSG00000177370.4 TPM= 2.34 Transcript Type= protein_coding
chr17	1003527	1229734	1003527	1229734	-	transcript99.chr17.nic@ABR	transcript99.chr17.nic	protein_coding	1228793,1125183,1100637,1091665,1083520,1079330,1073625,1072614,1069969,1067077,1058745,1057970,1056998,1056035,1050537,1050050,1013105,1012688,1011846,1010729,1009679,1007165,1003527	1229734,1125367,1100735,1091850,1083627,1079390,1073677,1072754,1070090,1067242,1058867,1058045,1057102,1056109,1050634,1050181,1013164,1012797,1011985,1010863,1009784,1007312,1006169	Gene ID= ENSG00000159842.14 TPM= 47.87 Transcript Type= NA
chr17	1003527	1011632	1003527	1011632	-	transcript115.chr17.nic@ABR	transcript115.chr17.nic	protein_coding	1010729,1009679,1007165,1003527	1011632,1009784,1007312,1006169	Gene ID= ENSG00000159842.14 TPM= 63.05 Transcript Type= NA
chr17	1227864	1231595	1227864	1231595	-	transcript121.chr17.nnic@ABR	transcript121.chr17.nnic	protein_coding	1231480,1228793,1227864	1231595,1230493,1228298	Gene ID= ENSG00000159842.14 TPM= 2.34 Transcript Type= NA
chr17	1003527	1187322	1003527	1187322	-	ENST00000544583.6@ABR	ENST00000544583.6	protein_coding	1186800,1125183,1100637,1091665,1083520,1079330,1073625,1072614,1069969,1067077,1058745,1057970,1056998,1056035,1050537,1050050,1013105,1012688,1011846,1010729,1009679,1007165,1003527	1187322,1125367,1100735,1091850,1083627,1079390,1073677,1072754,1070090,1067242,1058867,1058045,1057102,1056109,1050634,1050181,1013164,1012797,1011985,1010863,1009784,1007312,1006169	Gene ID= ENSG00000159842.14 TPM= 95.74 Transcript Type= protein_coding
chr17	1026214	1028153	1026214	1028153	+	transcript123.chr17.nnic@NA	transcript123.chr17.nnic	NA	1026214	1028153	Gene ID= novel_gene_chr17_124 TPM= 2.34 Transcript Type= NA
chr17	1106529	1109367	1106529	1109367	-	transcript125.chr17.nnic@NA	transcript125.chr17.nnic	NA	1106529	1109367	Gene ID= novel_gene_chr17_126 TPM= 2.34 Transcript Type= NA
chr17	1199920	1201135	1199920	1201135	-	transcript127.chr17.nnic@NA	transcript127.chr17.nnic	NA	1199920	1201135	Gene ID= novel_gene_chr17_128 TPM= 2.34 Transcript Type= NA
chr17	1227864	1231595	1227864	1231595	-	transcript129.chr17.nnic@NA	transcript129.chr17.nnic	NA	1231480,1228793,1227864	1231595,1230493,1228298	Gene ID= novel_gene_chr17_130 TPM= 2.34 Transcript Type= NA
chr17	1279663	1300987	1279663	1300987	+	ENST00000333813.3@TUSC5	ENST00000333813.3	protein_coding	1279663,1295491,1298251	1280388,1295623,1300987	Gene ID= ENSG00000184811.3 TPM= 1.17 Transcript Type= protein_coding
chr17	1344540	1400220	1344540	1400220	-	ENST00000571732.5@YWHAE	ENST00000571732.5	protein_coding	1400047,1369709,1364859,1361902,1361092,1354211,1344540	1400220,1369741,1365058,1362008,1361298,1354347,1345499	Gene ID= ENSG00000108953.16 TPM= 51.76 Transcript Type= protein_coding
chr17	1344272	1400378	1344272	1400378	-	ENST00000264335.12@YWHAE	ENST00000264335.12	protein_coding	1400047,1364859,1361902,1361092,1354211,1344272	1400378,1365058,1362008,1361298,1354347,1345499	Gene ID= ENSG00000108953.16 TPM= 36.58 Transcript Type= protein_coding
chr17	1420689	1456258	1420689	1456258	-	ENST00000300574.2@CRK	ENST00000300574.2	protein_coding	1455877,1436620,1420689	1456258,1437155,1423650	Gene ID= ENSG00000167193.7 TPM= 16.93 Transcript Type= protein_coding
chr17	1420689	1456223	1420689	1456223	-	ENST00000398970.5@CRK	ENST00000398970.5	protein_coding	1455877,1436790,1420689	1456223,1437155,1423650	Gene ID= ENSG00000167193.7 TPM= 15.76 Transcript Type= protein_coding
chr17	1464186	1486201	1464186	1486201	-	ENST00000575158.5@MYO1C	ENST00000575158.5	protein_coding	1486055,1484148,1483610,1482861,1482478,1480706,1480527,1479592,1479431,1478616,1478410,1478087,1477891,1477505,1474938,1474812,1474610,1472123,1471907,1471223,1471071,1470621,1470435,1470175,1469531,1468403,1468253,1467988,1467840,1467480,1467242,1464186	1486201,1484303,1483725,1483059,1482558,1480885,1480625,1479705,1479502,1478735,1478492,1478192,1477971,1477596,1475032,1474858,1474690,1472228,1472024,1471336,1471147,1470689,1470519,1470334,1469614,1468496,1468308,1468123,1467910,1467577,1467341,1465752	Gene ID= ENSG00000197879.14 TPM= 74.03 Transcript Type= protein_coding
chr17	1464188	1491678	1464188	1491678	-	ENST00000361007.6@MYO1C	ENST00000361007.6	protein_coding	1491600,1484148,1483610,1482861,1482478,1480706,1480527,1479592,1479431,1478616,1478410,1478087,1477891,1477505,1474938,1474812,1474610,1472123,1471907,1471223,1471071,1470621,1470435,1470175,1469531,1468403,1468253,1467988,1467840,1467480,1467242,1464188	1491678,1484303,1483725,1483059,1482558,1480885,1480625,1479705,1479502,1478735,1478492,1478192,1477971,1477596,1475032,1474858,1474690,1472228,1472024,1471336,1471147,1470689,1470519,1470334,1469614,1468496,1468308,1468123,1467910,1467577,1467341,1465752	Gene ID= ENSG00000197879.14 TPM= 95.63 Transcript Type= protein_coding
chr17	1488014	1490052	1488014	1490052	+	transcript198.chr17.nnic@NA	transcript198.chr17.nnic	NA	1488014	1490052	Gene ID= novel_gene_chr17_199 TPM= 17.51 Transcript Type= NA
chr17	1494757	1516735	1494757	1516735	-	ENST00000320345.10@INPP5K	ENST00000320345.10	protein_coding	1516456,1515888,1513872,1513453,1509683,1509178,1508115,1506980,1497936,1496666,1496319,1496060,1494757	1516735,1516118,1513979,1513561,1509799,1509353,1508226,1507089,1498122,1496803,1496402,1496164,1495879	Gene ID= ENSG00000132376.19 TPM= 3.5 Transcript Type= protein_coding
chr17	1494571	1516888	1494571	1516888	-	ENST00000421807.6@INPP5K	ENST00000421807.6	protein_coding	1516456,1513872,1513453,1509683,1509178,1508115,1506980,1497936,1496666,1496319,1496060,1494571	1516888,1513979,1513561,1509799,1509353,1508226,1507089,1498122,1496803,1496402,1496164,1495879	Gene ID= ENSG00000132376.19 TPM= 102.75 Transcript Type= protein_coding
chr17	1494571	1516613	1494571	1516613	-	transcript210.chr17.nic@INPP5K	transcript210.chr17.nic	protein_coding	1516456,1513872,1509683,1509178,1508115,1506980,1497936,1496666,1496319,1496060,1494571	1516613,1513979,1509799,1509353,1508226,1507089,1498122,1496803,1496402,1496164,1495879	Gene ID= ENSG00000132376.19 TPM= 16.35 Transcript Type= NA
chr17	1516931	1518096	1516931	1518096	+	ENST00000425081.2@PITPNA-AS1	ENST00000425081.2	antisense_RNA	1516931,1517718	1517093,1518096	Gene ID= ENSG00000236618.2 TPM= 5.84 Transcript Type= antisense_RNA
chr17	1517993	1562775	1517993	1562775	-	transcript227.chr17.nic@PITPNA	transcript227.chr17.nic	protein_coding	1562541,1553004,1548296,1541642,1541566,1538869,1535441,1535182,1534099,1521579,1517993	1562775,1553149,1548387,1541649,1541640,1538952,1535518,1535292,1534221,1521645,1520538	Gene ID= ENSG00000174238.14 TPM= 5.25 Transcript Type= NA
chr17	1517993	1562791	1517993	1562791	-	ENST00000539476.5@PITPNA	ENST00000539476.5	protein_coding	1562541,1558529,1553004,1548296,1541642,1541566,1538869,1535441,1535182,1534099,1521579,1517993	1562791,1558559,1553149,1548387,1541649,1541640,1538952,1535518,1535292,1534221,1521645,1520538	Gene ID= ENSG00000174238.14 TPM= 60.13 Transcript Type= protein_coding
chr17	1520213	1562746	1520213	1562746	-	ENST00000575288.5@PITPNA	ENST00000575288.5	protein_coding	1562541,1558529,1553004,1548296,1538869,1535441,1535182,1534099,1521579,1520213	1562746,1558559,1553149,1548387,1538952,1535518,1535292,1534221,1521645,1520538	Gene ID= ENSG00000174238.14 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr17	1555389	1558246	1555389	1558246	+	transcript237.chr17.nnic@NA	transcript237.chr17.nnic	NA	1555389	1558246	Gene ID= novel_gene_chr17_238 TPM= 4.67 Transcript Type= NA
chr17	1574372	1628425	1574372	1628425	-	transcript240.chr17.nic@SLC43A2	transcript240.chr17.nic	protein_coding	1628114,1627715,1616562,1614979,1613195,1593187,1591566,1591269,1590802,1586949,1585913,1583204,1578250,1576597,1574372	1628425,1627920,1616769,1615034,1613271,1593279,1591699,1591471,1590948,1586960,1586051,1583336,1578323,1576720,1575765	Gene ID= ENSG00000167703.14 TPM= 7.01 Transcript Type= NA
chr17	1569267	1628836	1569267	1628836	-	ENST00000301335.9@SLC43A2	ENST00000301335.9	protein_coding	1628794,1627715,1616562,1614979,1613195,1593187,1591566,1591269,1590802,1585913,1583204,1578250,1576597,1569267	1628836,1627920,1616769,1615034,1613271,1593279,1591699,1591471,1590948,1586051,1583336,1578323,1576720,1575765	Gene ID= ENSG00000167703.14 TPM= 16.35 Transcript Type= protein_coding
chr17	1574372	1628341	1574372	1628341	-	ENST00000571650.5@SLC43A2	ENST00000571650.5	protein_coding	1628081,1627715,1616562,1614979,1613195,1593187,1591566,1591269,1590802,1586949,1585913,1583204,1578250,1576597,1574372	1628341,1627920,1616769,1615034,1613271,1593279,1591699,1591471,1590948,1586960,1586051,1583336,1578323,1576720,1575765	Gene ID= ENSG00000167703.14 TPM= 31.53 Transcript Type= protein_coding
chr17	1633858	1645747	1633858	1645747	-	ENST00000263071.8@SCARF1	ENST00000263071.8	protein_coding	1645597,1645178,1644834,1643442,1640448,1639912,1639639,1638806,1636941,1636709,1633858	1645747,1645239,1644935,1643967,1640666,1640040,1639742,1638926,1637062,1636855,1635617	Gene ID= ENSG00000074660.15 TPM= 188.47 Transcript Type= protein_coding
chr17	1633865	1645723	1633865	1645723	-	ENST00000434376.6@SCARF1	ENST00000434376.6	protein_coding	1645597,1645178,1644834,1643442,1640448,1639912,1639639,1638806,1636941,1636709,1633865	1645723,1645239,1644935,1643967,1640666,1639970,1639742,1638926,1637062,1636855,1635617	Gene ID= ENSG00000074660.15 TPM= 8.66 Transcript Type= nonsense_mediated_decay
chr17	1646145	1650101	1646145	1650101	-	transcript267.chr17.nic@RILP	transcript267.chr17.nic	protein_coding	1649577,1649412,1649200,1648799,1648350,1647835,1646145	1650101,1649505,1649306,1649044,1648495,1647957,1646619	Gene ID= ENSG00000167705.11 TPM= 7.01 Transcript Type= NA
chr17	1646150	1650077	1646150	1650077	-	ENST00000301336.6@RILP	ENST00000301336.6	protein_coding	1649577,1649412,1649200,1648799,1648350,1647835,1646906,1646150	1650077,1649505,1649306,1649044,1648495,1647957,1646989,1646619	Gene ID= ENSG00000167705.11 TPM= 68.89 Transcript Type= protein_coding
chr17	1650629	1684882	1650629	1684882	-	ENST00000304992.10@PRPF8	ENST00000304992.10	protein_coding	1684780,1684472,1683533,1682129,1681820,1681478,1680929,1680726,1679609,1679291,1679017,1678762,1678518,1677565,1676976,1676505,1676207,1675928,1675620,1675152,1674442,1673746,1673357,1673081,1661906,1661611,1661271,1660993,1660698,1660432,1659841,1659357,1658526,1658253,1656648,1656392,1655350,1653777,1653542,1651648,1651414,1651108,1650629	1684882,1684582,1683701,1682293,1682038,1681690,1681054,1680831,1679799,1679410,1679206,1678881,1678652,1677694,1677172,1676711,1676370,1676054,1675812,1675339,1674680,1673892,1673567,1673197,1662153,1661790,1661406,1661162,1660827,1660578,1660001,1659548,1658763,1658381,1656761,1656565,1655543,1654016,1653683,1651788,1651553,1651310,1650956	Gene ID= ENSG00000174231.16 TPM= 110.92 Transcript Type= protein_coding
chr17	1650631	1684837	1650631	1684837	-	ENST00000572621.5@PRPF8	ENST00000572621.5	protein_coding	1684472,1683533,1682129,1681820,1681478,1680929,1680726,1679609,1679291,1679017,1678762,1678518,1677565,1676976,1676505,1676207,1675928,1675620,1675152,1674442,1673746,1673357,1673081,1661906,1661611,1661271,1660993,1660698,1660432,1659841,1659357,1658526,1658253,1656648,1656392,1655350,1653777,1653542,1651648,1651414,1651108,1650631	1684837,1683701,1682293,1682038,1681690,1681054,1680831,1679799,1679410,1679206,1678881,1678652,1677694,1677172,1676711,1676370,1676054,1675812,1675339,1674680,1673892,1673567,1673197,1662153,1661790,1661406,1661162,1660827,1660578,1660001,1659548,1658763,1658381,1656761,1656565,1655543,1654016,1653683,1651788,1651553,1651310,1650956	Gene ID= ENSG00000174231.16 TPM= 31.53 Transcript Type= protein_coding
chr17	1702816	1710401	1702816	1710401	-	transcript279.chr17.nnic@TLCD2	transcript279.chr17.nnic	protein_coding	1710067,1709804,1709499,1707203,1702816	1710401,1709886,1709581,1708222,1703443	Gene ID= ENSG00000185561.9 TPM= 2.34 Transcript Type= NA
chr17	1702790	1710438	1702790	1710438	-	ENST00000330676.7@TLCD2	ENST00000330676.7	protein_coding	1710067,1709804,1709499,1702790	1710438,1709886,1709581,1708222	Gene ID= ENSG00000185561.9 TPM= 5.84 Transcript Type= protein_coding
chr17	1711504	1717119	1711504	1717119	-	transcript291.chr17.nnic@MIR22HG	transcript291.chr17.nnic	lincRNA	1717037,1716130,1714371,1713703,1711504	1717119,1716272,1714453,1714014,1712646	Gene ID= ENSG00000186594.14 TPM= 2.34 Transcript Type= NA
chr17	1711511	1716251	1711511	1716251	-	ENST00000574306.1@MIR22HG	ENST00000574306.1	lincRNA	1716130,1711511	1716251,1714014	Gene ID= ENSG00000186594.14 TPM= 5.84 Transcript Type= lincRNA
chr17	1711717	1716210	1711717	1716210	-	transcript296.chr17.nic@MIR22HG	transcript296.chr17.nic	lincRNA	1714371,1711717	1716210,1714014	Gene ID= ENSG00000186594.14 TPM= 4.67 Transcript Type= NA
chr17	1724683	1738584	1724683	1738584	+	transcript301.chr17.nnic@WDR81	transcript301.chr17.nnic	protein_coding	1724683,1730380,1730755,1731068,1732325,1732666,1733527,1735572,1736136,1737365	1728626,1730487,1730945,1731258,1732490,1732831,1734216,1735717,1736218,1738584	Gene ID= ENSG00000167716.18 TPM= 14.01 Transcript Type= NA
chr17	1724683	1738584	1724683	1738584	+	transcript307.chr17.nic@WDR81	transcript307.chr17.nic	protein_coding	1724683,1730380,1730755,1731068,1732325,1732666,1735572,1736039,1737365	1728626,1730487,1730945,1731258,1732490,1734216,1735717,1736218,1738584	Gene ID= ENSG00000167716.18 TPM= 23.55 Transcript Type= NA
chr17	1730477	1738584	1730477	1738584	+	transcript310.chr17.nic@WDR81	transcript310.chr17.nic	protein_coding	1730477,1731068,1732325,1732666,1733527,1735572,1736039,1737365	1730945,1731258,1732490,1732831,1734216,1735717,1736218,1738584	Gene ID= ENSG00000167716.18 TPM= 21.22 Transcript Type= NA
chr17	1724960	1738592	1724960	1738592	+	ENST00000409644.5@WDR81	ENST00000409644.5	protein_coding	1724960,1730380,1730755,1731068,1732325,1732666,1733527,1735572,1736039,1737365	1728626,1730487,1730945,1731258,1732490,1732831,1734216,1735717,1736218,1738592	Gene ID= ENSG00000167716.18 TPM= 96.52 Transcript Type= protein_coding
chr17	1742836	1755265	1742836	1755265	+	ENST00000324015.7@SERPINF2	ENST00000324015.7	protein_coding	1742836,1744992,1745175,1745333,1745708,1747019,1747309,1748598,1752586,1754122	1742908,1745058,1745213,1745395,1745909,1747162,1747512,1748740,1752790,1755265	Gene ID= ENSG00000167711.13 TPM= 28.8 Transcript Type= protein_coding
chr17	1743026	1755268	1743026	1755268	+	ENST00000382061.4@SERPINF2	ENST00000382061.4	protein_coding	1743026,1744992,1745175,1745333,1745708,1747019,1747309,1748598,1752586,1754122	1743076,1745058,1745213,1745395,1745909,1747162,1747512,1748740,1752790,1755268	Gene ID= ENSG00000167711.13 TPM= 28.8 Transcript Type= protein_coding
chr17	1752706	1755269	1752706	1755269	+	transcript320.chr17.nnic@NA	transcript320.chr17.nnic	NA	1752706	1755269	Gene ID= novel_gene_chr17_321 TPM= 12.46 Transcript Type= NA
chr17	1761959	1777574	1761959	1777574	+	ENST00000254722.8@SERPINF1	ENST00000254722.8	protein_coding	1761959,1766903,1769852,1771029,1771872,1775058,1776532,1777187	1762113,1766994,1770050,1771184,1772075,1775200,1776742,1777574	Gene ID= ENSG00000132386.10 TPM= 143.61 Transcript Type= protein_coding
chr17	1779539	1787019	1779539	1787019	-	transcript334.chr17.nic@SMYD4	transcript334.chr17.nic	protein_coding	1786810,1784326,1783360,1783035,1779539	1787019,1784461,1783476,1783158,1781439	Gene ID= ENSG00000186532.11 TPM= 2.92 Transcript Type= NA
chr17	1779539	1783932	1779539	1783932	-	transcript335.chr17.nnic@SMYD4	transcript335.chr17.nnic	protein_coding	1783616,1783360,1783035,1779539	1783932,1783476,1783158,1781439	Gene ID= ENSG00000186532.11 TPM= 2.92 Transcript Type= NA
chr17	1779485	1829881	1779485	1829881	-	ENST00000305513.11@SMYD4	ENST00000305513.11	protein_coding	1829726,1827861,1811971,1804626,1799857,1787422,1786810,1784326,1783360,1783035,1779485	1829881,1828006,1812115,1804715,1801024,1787604,1786973,1784461,1783476,1783158,1781439	Gene ID= ENSG00000186532.11 TPM= 4.67 Transcript Type= protein_coding
chr17	1829952	1898071	1829952	1898071	+	transcript344.chr17.nnic@RPA1	transcript344.chr17.nnic	protein_coding	1829952,1842803,1843920,1844578,1853101,1875661,1877212,1878993,1879215,1879560,1880543,1883812,1888675,1891833,1895009,1897071	1830126,1842853,1843998,1844686,1853189,1875793,1877314,1879061,1879407,1879699,1880691,1883944,1888851,1891940,1895095,1898071	Gene ID= ENSG00000132383.11 TPM= 4.67 Transcript Type= NA
chr17	1829984	1899554	1829984	1899554	+	ENST00000254719.9@RPA1	ENST00000254719.9	protein_coding	1829984,1842803,1843920,1844578,1853101,1872434,1875661,1877212,1878993,1879215,1879560,1880543,1883812,1888675,1891833,1895009,1897071	1830126,1842853,1843998,1844686,1853189,1872526,1875793,1877314,1879061,1879407,1879699,1880691,1883944,1888851,1891940,1895095,1899554	Gene ID= ENSG00000132383.11 TPM= 2.34 Transcript Type= protein_coding
chr17	1934679	2025365	1934679	2025365	-	transcript345.chr17.nnic@RTN4RL1	transcript345.chr17.nnic	protein_coding	2024853,2014150,1934679	2025365,2014294,1937808	Gene ID= ENSG00000185924.6 TPM= 6.42 Transcript Type= NA
chr17	1934677	2025345	1934677	2025345	-	ENST00000331238.6@RTN4RL1	ENST00000331238.6	protein_coding	2024853,1934677	2025345,1937808	Gene ID= ENSG00000185924.6 TPM= 8.76 Transcript Type= protein_coding
chr17	2030110	2043430	2030110	2043430	+	ENST00000263083.10@DPH1	ENST00000263083.10	protein_coding	2030110,2033505,2033779,2035970,2036529,2036835,2039755,2040218,2040505,2041103,2041481,2041768,2042605	2030230,2033657,2033842,2036091,2036686,2036956,2039823,2040374,2040605,2041181,2041621,2041875,2043430	Gene ID= ENSG00000108963.17 TPM= 26.85 Transcript Type= protein_coding
chr17	2055103	2059687	2055103	2059687	+	transcript355.chr17.nnic@HIC1	transcript355.chr17.nnic	protein_coding	2055103,2056671,2057221	2055238,2057094,2059687	Gene ID= ENSG00000177374.12 TPM= 20.43 Transcript Type= NA
chr17	2055099	2059686	2055099	2059686	+	ENST00000399849.4@HIC1	ENST00000399849.4	protein_coding	2055099,2056671	2055238,2059686	Gene ID= ENSG00000177374.12 TPM= 46.12 Transcript Type= protein_coding
chr17	2059846	2303568	2059846	2303568	-	transcript353.chr17.nnic@SMG6	transcript353.chr17.nnic	protein_coding	2303014,2298906,2297863,2297243,2292871,2292552,2283625,2282647,2244658,2236492,2188399,2186663,2172658,2085725,2081810,2068778,2065468,2065073,2059846	2303568,2300664,2298055,2297353,2292977,2292630,2283735,2282859,2244719,2236637,2188515,2186831,2172859,2085901,2081956,2068931,2065679,2065154,2061622	Gene ID= ENSG00000070366.13 TPM= 13.43 Transcript Type= NA
chr17	2059843	2303771	2059843	2303771	-	ENST00000263073.10@SMG6	ENST00000263073.10	protein_coding	2303633,2298906,2297863,2297243,2292871,2292552,2283625,2282647,2244658,2236492,2188399,2186663,2172658,2085725,2081810,2068778,2065468,2065073,2059843	2303771,2300664,2298055,2297353,2292977,2292630,2283735,2282859,2244719,2236637,2188515,2186831,2172859,2085901,2081956,2068931,2065679,2065154,2061622	Gene ID= ENSG00000070366.13 TPM= 26.27 Transcript Type= protein_coding
chr17	2303704	2325260	2303704	2325260	+	ENST00000344595.9@SRR	ENST00000344595.9	protein_coding	2303704,2315557,2317870,2318826,2321306,2321542,2323136,2323655	2304017,2315728,2317996,2318929,2321425,2321616,2323345,2325260	Gene ID= ENSG00000167720.12 TPM= 16.35 Transcript Type= protein_coding
chr17	2322503	2337507	2322503	2337507	-	ENST00000301364.9@TSR1	ENST00000301364.9	protein_coding	2336331,2336037,2335511,2335260,2334472,2333557,2332961,2332169,2330947,2330515,2329343,2325304,2324689,2324504,2322503	2337507,2336140,2335730,2335394,2334896,2333716,2333124,2332359,2331109,2330625,2329475,2325420,2324829,2324578,2324374	Gene ID= ENSG00000167721.10 TPM= 8.17 Transcript Type= protein_coding
chr17	2337487	2381050	2337487	2381050	+	transcript377.chr17.nnic@SGSM2	transcript377.chr17.nnic	protein_coding	2337487,2343545,2361637,2362109,2362838,2362989,2363465,2364059,2364311,2364596,2364897,2365215,2371262,2372190,2372343,2372953,2373331,2375492,2376137,2376733,2376959,2377857,2379036,2379432	2337745,2343620,2361799,2362270,2362905,2363134,2363599,2364183,2364376,2364663,2365057,2365341,2371415,2372254,2372488,2373081,2373513,2375875,2376261,2376815,2377068,2377953,2379203,2381050	Gene ID= ENSG00000141258.12 TPM= 10.51 Transcript Type= NA
chr17	2337487	2381050	2337487	2381050	+	transcript393.chr17.nic@SGSM2	transcript393.chr17.nic	protein_coding	2337487,2343545,2361637,2362109,2362838,2363465,2364059,2364596,2364897,2365215,2371262,2372190,2372343,2372953,2373331,2375492,2376137,2376733,2376959,2377857,2379036,2379432	2337745,2343620,2361799,2362270,2363134,2363599,2364183,2364663,2365057,2365341,2371415,2372254,2372488,2373081,2373513,2375875,2376261,2376815,2377068,2377953,2379203,2381050	Gene ID= ENSG00000141258.12 TPM= 17.51 Transcript Type= NA
chr17	2337514	2381058	2337514	2381058	+	ENST00000426855.6@SGSM2	ENST00000426855.6	protein_coding	2337514,2343545,2361637,2362109,2362838,2362989,2363465,2364059,2364596,2364897,2365215,2371262,2372190,2372343,2372953,2373331,2375492,2376137,2376733,2376959,2377857,2379036,2379432	2337745,2343620,2361799,2362270,2362905,2363134,2363599,2364183,2364663,2365057,2365341,2371415,2372254,2372488,2373081,2373513,2375875,2376261,2376815,2377068,2377953,2379203,2381058	Gene ID= ENSG00000141258.12 TPM= 33.86 Transcript Type= protein_coding
chr17	2337512	2381050	2337512	2381050	+	ENST00000268989.7@SGSM2	ENST00000268989.7	protein_coding	2337512,2343545,2361637,2362109,2362838,2362989,2363465,2364059,2364596,2364897,2365215,2367271,2371262,2372190,2372343,2372953,2373331,2375492,2376137,2376733,2376959,2377857,2379036,2379432	2337745,2343620,2361799,2362270,2362905,2363134,2363599,2364183,2364663,2365057,2365341,2367405,2371415,2372254,2372488,2373081,2373513,2375875,2376261,2376815,2377068,2377953,2379203,2381050	Gene ID= ENSG00000141258.12 TPM= 26.85 Transcript Type= protein_coding
chr17	2384241	2386633	2384241	2386633	-	transcript403.chr17.nnic@NA	transcript403.chr17.nnic	NA	2384241	2386633	Gene ID= novel_gene_chr17_404 TPM= 8.17 Transcript Type= NA
chr17	2675196	2685615	2675196	2685615	+	transcript424.chr17.nic@PAFAH1B1	transcript424.chr17.nic	protein_coding	2675196,2680164,2681729	2676606,2680320,2685615	Gene ID= ENSG00000007168.12 TPM= 24.52 Transcript Type= NA
chr17	2640453	2642964	2640453	2642964	-	transcript430.chr17.nnic@NA	transcript430.chr17.nnic	NA	2640453	2642964	Gene ID= novel_gene_chr17_431 TPM= 5.84 Transcript Type= NA
chr17	2671571	2673362	2671571	2673362	-	transcript428.chr17.nnic@NA	transcript428.chr17.nnic	NA	2671571	2673362	Gene ID= novel_gene_chr17_429 TPM= 8.17 Transcript Type= NA
chr17	3476002	3503419	3476002	3503419	+	ENST00000263080.2@ASPA	ENST00000263080.2	protein_coding	3476002,3481603,3483499,3489235,3494350,3498891	3476395,3481798,3483592,3489342,3494459,3503419	Gene ID= ENSG00000108381.10 TPM= 2.34 Transcript Type= protein_coding
chr17	3636436	3661538	3636436	3661538	+	transcript442.chr17.nnic@CTNS	transcript442.chr17.nnic	protein_coding	3636436,3637107,3640188,3647444,3648847,3654998,3655221,3656487,3656676,3658005,3659858,3660236	3636703,3637316,3640267,3647522,3648931,3655101,3655352,3656586,3656795,3658175,3659975,3661538	Gene ID= ENSG00000040531.14 TPM= 13.63 Transcript Type= NA
chr17	3636468	3661538	3636468	3661538	+	ENST00000046640.7@CTNS	ENST00000046640.7	protein_coding	3636468,3637107,3640188,3647444,3648847,3654998,3655221,3656487,3656676,3658005,3659858,3660236	3636831,3637316,3640267,3647522,3648931,3655101,3655352,3656586,3656795,3658175,3659975,3661538	Gene ID= ENSG00000040531.14 TPM= 22.97 Transcript Type= protein_coding
chr17	3636496	3661538	3636496	3661538	+	transcript446.chr17.nic@CTNS	transcript446.chr17.nic	protein_coding	3636496,3637107,3647444,3648847,3654998,3655221,3656487,3656676,3658005,3659858,3660236	3636831,3637316,3647522,3648931,3655101,3655352,3656586,3656795,3658175,3659975,3661538	Gene ID= ENSG00000040531.14 TPM= 7.79 Transcript Type= NA
chr17	3656883	3659010	3656883	3659010	-	transcript470.chr17.nnic@NA	transcript470.chr17.nnic	NA	3656883	3659010	Gene ID= novel_gene_chr17_471 TPM= 2.34 Transcript Type= NA
chr17	3662895	3668626	3662895	3668626	-	transcript457.chr17.nnic@TAX1BP3	transcript457.chr17.nnic	protein_coding	3668488,3664679,3664195,3663648,3662895	3668626,3664798,3664272,3663885,3663562	Gene ID= ENSG00000213977.7 TPM= 5.84 Transcript Type= NA
chr17	3662902	3668682	3662902	3668682	-	ENST00000225525.3@TAX1BP3	ENST00000225525.3	protein_coding	3668488,3664679,3664195,3662902	3668682,3664798,3664272,3663885	Gene ID= ENSG00000213977.7 TPM= 31.53 Transcript Type= protein_coding
chr17	3668815	3669665	3668815	3669665	+	ENST00000248378.5@EMC6	ENST00000248378.5	protein_coding	3668815,3669098	3668899,3669665	Gene ID= ENSG00000127774.6 TPM= 30.94 Transcript Type= protein_coding
chr17	3668822	3669668	3668822	3669668	+	ENST00000397133.2@EMC6	ENST00000397133.2	protein_coding	3668822,3669098	3669012,3669668	Gene ID= ENSG00000127774.6 TPM= 12.26 Transcript Type= protein_coding
chr17	3714628	3801243	3714628	3801243	-	ENST00000263087.8@ITGAE	ENST00000263087.8	protein_coding	3801111,3777540,3763869,3761915,3761403,3761013,3760172,3759402,3757706,3756984,3755830,3755117,3753783,3753290,3751650,3750352,3747922,3745764,3743489,3739805,3734817,3732368,3731104,3729478,3728105,3727919,3723688,3723288,3720307,3716688,3714628	3801243,3777660,3763960,3761982,3761520,3761177,3760287,3759553,3757859,3757134,3755897,3755261,3753925,3753430,3751874,3750482,3748052,3745927,3743617,3739878,3734949,3732466,3731183,3729555,3728168,3728026,3723744,3723383,3720402,3716798,3714942	Gene ID= ENSG00000083457.11 TPM= 12.84 Transcript Type= protein_coding
chr17	3714628	3723837	3714628	3723837	-	ENST00000572179.5@ITGAE	ENST00000572179.5	protein_coding	3723688,3720307,3716688,3714628	3723837,3720402,3716798,3714942	Gene ID= ENSG00000083457.11 TPM= 17.51 Transcript Type= processed_transcript
chr17	3714692	3723854	3714692	3723854	-	ENST00000570360.1@ITGAE	ENST00000570360.1	protein_coding	3723688,3723288,3720307,3716688,3714692	3723854,3723383,3720402,3716798,3714942	Gene ID= ENSG00000083457.11 TPM= 1.17 Transcript Type= processed_transcript
chr17	3723903	3726699	3723903	3726699	+	ENST00000325418.5@HASPIN	ENST00000325418.5	protein_coding	3723903	3726699	Gene ID= ENSG00000177602.5 TPM= 1.17 Transcript Type= protein_coding
chr17	3806749	3810375	3806749	3810375	-	transcript481.chr17.nnic@NA	transcript481.chr17.nnic	NA	3806749	3810375	Gene ID= novel_gene_chr17_482 TPM= 11.68 Transcript Type= NA
chr17	3839104	3846286	3839104	3846286	-	transcript498.chr17.nic@NCBP3	transcript498.chr17.nic	protein_coding	3846041,3843086,3839104	3846286,3843151,3840205	Gene ID= ENSG00000074356.16 TPM= 3.5 Transcript Type= NA
chr17	3860315	3893044	3860315	3893044	-	ENST00000348335.6@CAMKK1	ENST00000348335.6	protein_coding	3892939,3885328,3884380,3883884,3883429,3883042,3882528,3881627,3880346,3876223,3873409,3872554,3869801,3869487,3865908,3860315	3893044,3885730,3884427,3883937,3883480,3883175,3882564,3881648,3880434,3876422,3873462,3872627,3869888,3869615,3866011,3862283	Gene ID= ENSG00000004660.14 TPM= 16.35 Transcript Type= protein_coding
chr17	3896592	3916500	3896592	3916500	-	ENST00000225538.3@P2RX1	ENST00000225538.3	protein_coding	3916089,3905220,3904858,3904330,3903928,3903551,3903202,3899634,3898934,3898484,3898009,3896592	3916500,3905367,3904929,3904399,3904024,3903631,3903343,3899761,3899024,3898549,3898110,3897879	Gene ID= ENSG00000108405.3 TPM= 3.5 Transcript Type= protein_coding
chr17	3896592	3916452	3896592	3916452	-	ENST00000572418.1@P2RX1	ENST00000572418.1	protein_coding	3916089,3905220,3904858,3904330,3903551,3903202,3899634,3898934,3898484,3898009,3896592	3916452,3905367,3904929,3904399,3904024,3903343,3899761,3899024,3898549,3898110,3897879	Gene ID= ENSG00000108405.3 TPM= 5.84 Transcript Type= retained_intron
chr17	3923875	3964492	3923875	3964492	-	transcript521.chr17.nnic@ATP2A3	transcript521.chr17.nnic	protein_coding	3964174,3953693,3951581,3951251,3950693,3950511,3947391,3945060,3944704,3943391,3942606,3941436,3940971,3937416,3936267,3935192,3930301,3929328,3928663,3923875	3964492,3953710,3951685,3951389,3950773,3950596,3947855,3945148,3944806,3943522,3942731,3941654,3941306,3937636,3936469,3935277,3930434,3929445,3928780,3925441	Gene ID= ENSG00000074370.17 TPM= 24.32 Transcript Type= NA
chr17	3923875	3964437	3923875	3964437	-	transcript523.chr17.nic@ATP2A3	transcript523.chr17.nic	protein_coding	3964174,3953693,3953347,3951581,3951251,3950693,3950511,3947391,3945060,3944704,3943391,3942606,3941436,3940971,3936267,3935192,3930301,3929328,3928663,3923875	3964437,3953710,3953429,3951685,3951389,3950773,3950596,3947855,3945148,3944806,3943522,3942731,3941654,3941306,3937636,3935277,3930434,3929445,3928780,3925441	Gene ID= ENSG00000074370.17 TPM= 17.9 Transcript Type= NA
chr17	3923870	3964464	3923870	3964464	-	ENST00000309890.11@ATP2A3	ENST00000309890.11	protein_coding	3964174,3953693,3953347,3951581,3951251,3950693,3950511,3947391,3945060,3944704,3943391,3942606,3941436,3940971,3937416,3936267,3935192,3930301,3929328,3928663,3928227,3923870	3964464,3953710,3953429,3951685,3951389,3950773,3950596,3947855,3945148,3944806,3943522,3942731,3941654,3941306,3937636,3936469,3935277,3930434,3929445,3928780,3928327,3925441	Gene ID= ENSG00000074370.17 TPM= 13.81 Transcript Type= protein_coding
chr17	4143256	4157697	4143256	4157697	+	ENST00000301391.7@CYB5D2	ENST00000301391.7	protein_coding	4143256,4149891,4154674,4156866	4144005,4150031,4154860,4157697	Gene ID= ENSG00000167740.9 TPM= 8.17 Transcript Type= protein_coding
chr17	4163907	4263977	4163907	4263977	-	ENST00000341657.8@ANKFY1	ENST00000341657.8	protein_coding	4263932,4242256,4235772,4216983,4209824,4207933,4206321,4197373,4195403,4194978,4189382,4184818,4183812,4183398,4182181,4181254,4179721,4178857,4177126,4173909,4173354,4172556,4170715,4169198,4163907	4263977,4242448,4235890,4217118,4209947,4208082,4206486,4197577,4195471,4195177,4189479,4185046,4183910,4183551,4182349,4181372,4179877,4179057,4177302,4174056,4173444,4172680,4170861,4169288,4167911	Gene ID= ENSG00000185722.16 TPM= 16.35 Transcript Type= protein_coding
chr17	4269259	4366482	4269259	4366482	-	ENST00000396981.6@UBE2G1	ENST00000396981.6	protein_coding	4366271,4307021,4296717,4289230,4282798,4269259	4366482,4307123,4296814,4289408,4282921,4272516	Gene ID= ENSG00000132388.12 TPM= 16.35 Transcript Type= protein_coding
chr17	4283240	4284172	4283240	4284172	+	transcript549.chr17.nnic@NA	transcript549.chr17.nnic	NA	4283240	4284172	Gene ID= novel_gene_chr17_550 TPM= 2.34 Transcript Type= NA
chr17	4498845	4539035	4498845	4539035	+	transcript564.chr17.nnic@SPNS2	transcript564.chr17.nnic	protein_coding	4498845,4513247,4525057,4530632,4531053,4532542,4532977,4533243,4533788,4536076,4536263,4536786,4537453	4499417,4513312,4525193,4530783,4531119,4532684,4533129,4533432,4533853,4536174,4536426,4536946,4539035	Gene ID= ENSG00000183018.8 TPM= 8.64 Transcript Type= NA
chr17	4498838	4539035	4498838	4539035	+	ENST00000329078.7@SPNS2	ENST00000329078.7	protein_coding	4498838,4513247,4525057,4530632,4531053,4532542,4532977,4533243,4533788,4536076,4536263,4536900,4537453	4499417,4513312,4525193,4530783,4531119,4532684,4533129,4533432,4533853,4536174,4536426,4536946,4539035	Gene ID= ENSG00000183018.8 TPM= 159.84 Transcript Type= protein_coding
chr17	4498845	4539035	4498845	4539035	+	transcript571.chr17.nic@SPNS2	transcript571.chr17.nic	protein_coding	4498845,4513247,4525057,4530632,4531053,4532542,4532977,4533243,4533788,4536076,4536263,4537453	4499417,4513312,4525193,4530783,4531119,4532684,4533129,4533432,4533853,4536174,4536946,4539035	Gene ID= ENSG00000183018.8 TPM= 9.81 Transcript Type= NA
chr17	4536762	4539035	4536762	4539035	+	ENST00000570979.1@SPNS2	ENST00000570979.1	protein_coding	4536762,4537453	4536946,4539035	Gene ID= ENSG00000183018.8 TPM= 33.86 Transcript Type= retained_intron
chr17	4503984	4506383	4503984	4506383	-	transcript588.chr17.nnic@NA	transcript588.chr17.nnic	NA	4503984	4506383	Gene ID= novel_gene_chr17_589 TPM= 2.34 Transcript Type= NA
chr17	4538897	4555386	4538897	4555386	-	ENST00000381556.6@MYBBP1A	ENST00000381556.6	protein_coding	4555127,4554861,4554195,4554019,4553810,4552451,4552125,4551880,4550058,4549332,4548524,4548143,4547958,4545846,4545610,4545259,4545026,4544751,4544489,4542913,4542616,4542464,4541784,4541463,4540348,4539439,4538897	4555386,4554956,4554278,4554093,4553917,4552626,4552292,4551997,4550353,4549442,4548649,4548310,4548057,4545942,4545761,4545345,4545175,4544921,4544646,4543165,4542741,4542532,4541891,4541564,4540484,4539967,4538975	Gene ID= ENSG00000132382.14 TPM= 6.81 Transcript Type= protein_coding
chr17	4538902	4555631	4538902	4555631	-	ENST00000254718.8@MYBBP1A	ENST00000254718.8	protein_coding	4555127,4554861,4554195,4554019,4553810,4552451,4552125,4551880,4550058,4549332,4548524,4548143,4547958,4545846,4545610,4545259,4545026,4544751,4544489,4542913,4542616,4542464,4541784,4541463,4540348,4538902	4555631,4554956,4554278,4554093,4553917,4552626,4552292,4551997,4550353,4549442,4548649,4548310,4548057,4545942,4545761,4545345,4545175,4544921,4544646,4543165,4542741,4542532,4541891,4541564,4540484,4539967	Gene ID= ENSG00000132382.14 TPM= 26.07 Transcript Type= protein_coding
chr17	4538902	4555389	4538902	4555389	-	transcript554.chr17.nic@MYBBP1A	transcript554.chr17.nic	protein_coding	4555127,4554861,4554195,4554019,4553810,4552451,4552125,4551880,4550058,4549332,4548524,4548143,4547958,4545846,4545610,4545259,4545026,4544751,4544489,4542913,4542616,4541784,4541463,4540348,4538902	4555389,4554956,4554278,4554093,4553917,4552626,4552292,4551997,4550353,4549442,4548649,4548310,4548057,4545942,4545761,4545345,4545175,4544921,4544646,4543165,4542741,4542532,4541564,4540484,4539967	Gene ID= ENSG00000132382.14 TPM= 6.81 Transcript Type= NA
chr17	4538902	4540729	4538902	4540729	-	transcript585.chr17.nnic@MYBBP1A	transcript585.chr17.nnic	protein_coding	4540648,4540348,4538902	4540729,4540484,4539967	Gene ID= ENSG00000132382.14 TPM= 3.5 Transcript Type= NA
chr17	4538904	4540698	4538904	4540698	-	transcript586.chr17.nnic@MYBBP1A	transcript586.chr17.nnic	protein_coding	4540648,4538904	4540698,4539967	Gene ID= ENSG00000132382.14 TPM= 3.5 Transcript Type= NA
chr17	4557312	4560818	4557312	4560818	-	ENST00000574154.5@GGT6	ENST00000574154.5	protein_coding	4560382,4559558,4559343,4557312	4560818,4559760,4559438,4559057	Gene ID= ENSG00000167741.10 TPM= 1.17 Transcript Type= protein_coding
chr17	4584505	4608319	4584505	4608319	+	transcript595.chr17.nic@SMTNL2	transcript595.chr17.nic	protein_coding	4584505,4592361,4593822,4595145,4596860,4597172,4607361	4585004,4592448,4593897,4595327,4596977,4597323,4608319	Gene ID= ENSG00000188176.11 TPM= 2.92 Transcript Type= NA
chr17	4583999	4608319	4583999	4608319	+	ENST00000338859.8@SMTNL2	ENST00000338859.8	protein_coding	4583999,4592361,4592929,4593822,4595145,4596860,4597172,4607361	4584098,4592448,4593171,4593897,4595327,4596977,4597323,4608319	Gene ID= ENSG00000188176.11 TPM= 1.75 Transcript Type= protein_coding
chr17	4610449	4617650	4610449	4617650	+	ENST00000573270.1@LINC01996	ENST00000573270.1	lincRNA	4610449,4616763	4610833,4617650	Gene ID= ENSG00000261863.1 TPM= 2.34 Transcript Type= lincRNA
chr17	4696921	4698650	4696921	4698650	+	transcript604.chr17.nnic@NA	transcript604.chr17.nnic	NA	4696921	4698650	Gene ID= novel_gene_chr17_605 TPM= 2.34 Transcript Type= NA
chr17	4710633	4721496	4710633	4721496	+	transcript613.chr17.nic@ARRB2	transcript613.chr17.nic	protein_coding	4710633,4715973,4716147,4716412,4717217,4717685,4717888,4718261,4718612,4719283,4720216,4720393,4720550,4720946	4710744,4716033,4716191,4716608,4717276,4717752,4718023,4718345,4718684,4719420,4720299,4720472,4720640,4721496	Gene ID= ENSG00000141480.17 TPM= 5.1 Transcript Type= NA
chr17	4710600	4721496	4710600	4721496	+	transcript619.chr17.nic@ARRB2	transcript619.chr17.nic	protein_coding	4710600,4715013,4715973,4716147,4716412,4717217,4717685,4717888,4719283,4720216,4720393,4720586,4720946	4710744,4715043,4716033,4716191,4716608,4717276,4717752,4718684,4719420,4720299,4720472,4720640,4721496	Gene ID= ENSG00000141480.17 TPM= 10.01 Transcript Type= NA
chr17	4710489	4721471	4710489	4721471	+	ENST00000269260.6@ARRB2	ENST00000269260.6	protein_coding	4710489,4715013,4715973,4716147,4716412,4717217,4717685,4717888,4718261,4718612,4719283,4720216,4720393,4720586,4720946	4710744,4715043,4716033,4716191,4716608,4717276,4717752,4718023,4718345,4718684,4719420,4720299,4720472,4720640,4721471	Gene ID= ENSG00000141480.17 TPM= 67.95 Transcript Type= protein_coding
chr17	4710643	4721482	4710643	4721482	+	ENST00000572457.5@ARRB2	ENST00000572457.5	protein_coding	4710643,4716147,4716412,4717217,4717685,4717888,4718261,4718612,4719283,4720216,4720393,4720586,4720946	4710744,4716191,4716608,4717276,4717752,4718023,4718345,4718684,4719420,4720299,4720472,4720640,4721482	Gene ID= ENSG00000141480.17 TPM= 2.77 Transcript Type= protein_coding
chr17	4710693	4721496	4710693	4721496	+	ENST00000412477.7@ARRB2	ENST00000412477.7	protein_coding	4710693,4715013,4715973,4716147,4716412,4717217,4717685,4717888,4718261,4718612,4719283,4720216,4720393,4720586,4720946	4710744,4715043,4716033,4716191,4716671,4717276,4717752,4718023,4718345,4718684,4719420,4720299,4720472,4720640,4721496	Gene ID= ENSG00000141480.17 TPM= 7.67 Transcript Type= protein_coding
chr17	4710661	4713804	4710661	4713804	+	transcript627.chr17.nnic@NA	transcript627.chr17.nnic	NA	4710661	4713804	Gene ID= novel_gene_chr17_628 TPM= 2.34 Transcript Type= NA
chr17	4731431	4732433	4731431	4732433	+	ENST00000573708.1@MED11	ENST00000573708.1	protein_coding	4731431,4731776	4731574,4732433	Gene ID= ENSG00000161920.9 TPM= 1.17 Transcript Type= protein_coding
chr17	4731434	4733610	4731434	4733610	+	ENST00000293777.5@MED11	ENST00000293777.5	protein_coding	4731434,4731776,4733050	4731574,4731906,4733610	Gene ID= ENSG00000161920.9 TPM= 7.01 Transcript Type= protein_coding
chr17	4733526	4739819	4733526	4739819	-	ENST00000293778.10@CXCL16	ENST00000293778.10	protein_coding	4739261,4738782,4738408,4735092,4734583,4733526	4739819,4738920,4738490,4735508,4734652,4734479	Gene ID= ENSG00000161921.14 TPM= 272.05 Transcript Type= protein_coding
chr17	4733575	4736380	4733575	4736380	-	ENST00000576153.5@CXCL16	ENST00000576153.5	protein_coding	4736289,4735092,4734583,4733575	4736380,4735508,4734652,4734479	Gene ID= ENSG00000161921.14 TPM= 19.85 Transcript Type= processed_transcript
chr17	4739653	4746113	4739653	4746113	+	transcript630.chr17.nnic@ZMYND15	transcript630.chr17.nnic	protein_coding	4739653,4740519,4741582,4741915,4742331,4743303,4743767,4743991,4744190,4744369,4744625,4744870,4745215,4745819	4740017,4741140,4741816,4742070,4742491,4743455,4743847,4744107,4744278,4744467,4744778,4744928,4745375,4746113	Gene ID= ENSG00000141497.13 TPM= 3.5 Transcript Type= NA
chr17	4739650	4746113	4739650	4746113	+	transcript631.chr17.nic@ZMYND15	transcript631.chr17.nic	protein_coding	4739650,4741582,4741915,4742331,4743303,4743767,4743991,4744190,4744369,4744625,4744870,4745215,4745819	4741140,4741816,4742070,4742491,4743455,4743847,4744107,4744278,4744467,4744778,4744928,4745375,4746113	Gene ID= ENSG00000141497.13 TPM= 2.34 Transcript Type= NA
chr17	4739650	4746113	4739650	4746113	+	transcript637.chr17.nnic@ZMYND15	transcript637.chr17.nnic	protein_coding	4739650,4743303,4743767,4743991,4744190,4744369,4744625,4744870,4745215,4745819	4740050,4743455,4743847,4744107,4744278,4744467,4744778,4744928,4745375,4746113	Gene ID= ENSG00000141497.13 TPM= 5.25 Transcript Type= NA
chr17	4739794	4746113	4739794	4746113	+	transcript638.chr17.nnic@ZMYND15	transcript638.chr17.nnic	protein_coding	4739794,4743303,4743767,4744190,4744369,4744625,4744870,4745215,4745819	4740017,4743455,4743847,4744278,4744467,4744778,4744928,4745375,4746113	Gene ID= ENSG00000141497.13 TPM= 2.92 Transcript Type= NA
chr17	4785285	4786432	4785285	4786432	-	ENST00000328739.5@VMO1	ENST00000328739.5	protein_coding	4786158,4785937,4785285	4786432,4786052,4785659	Gene ID= ENSG00000182853.11 TPM= 5.84 Transcript Type= protein_coding
chr17	4796144	4798503	4796144	4798503	+	ENST00000270586.7@PSMB6	ENST00000270586.7	protein_coding	4796144,4796728,4797438,4797682,4798009,4798280	4796296,4796795,4797569,4797811,4798153,4798503	Gene ID= ENSG00000142507.9 TPM= 281.39 Transcript Type= protein_coding
chr17	4807096	4823434	4807096	4823434	+	ENST00000263088.10@PLD2	ENST00000263088.10	protein_coding	4807096,4807772,4807984,4808274,4809100,4809298,4809493,4809691,4809877,4810802,4814418,4814633,4815476,4815764,4816620,4816937,4817146,4818002,4818297,4818494,4818774,4819084,4819429,4821793,4822640	4807225,4807881,4808114,4808416,4809205,4809363,4809551,4809783,4810029,4810951,4814501,4814711,4815586,4815934,4816746,4817055,4817259,4818106,4818385,4818607,4818823,4819218,4819582,4821907,4823434	Gene ID= ENSG00000129219.13 TPM= 23.94 Transcript Type= protein_coding
chr17	4807169	4823428	4807169	4823428	+	ENST00000572940.5@PLD2	ENST00000572940.5	protein_coding	4807169,4807772,4807984,4808274,4809100,4809298,4809493,4809691,4809877,4810802,4814418,4814633,4815476,4815764,4816620,4816937,4817146,4818002,4818297,4818494,4818774,4819084,4819429,4821793,4822640	4807225,4807881,4808114,4808416,4809205,4809363,4809551,4809783,4810029,4810951,4814501,4814711,4815586,4815934,4816746,4817055,4817259,4818106,4818385,4818607,4818823,4819218,4819549,4821907,4823428	Gene ID= ENSG00000129219.13 TPM= 21.6 Transcript Type= protein_coding
chr17	4833400	4898054	4833400	4898054	+	ENST00000347992.11@MINK1	ENST00000347992.11	protein_coding	4833400,4878317,4880984,4881132,4884363,4884912,4885483,4885911,4886120,4886451,4887110,4887580,4889647,4890517,4890951,4891456,4892149,4892656,4892979,4893286,4893434,4893988,4894174,4894525,4895075,4895350,4895698,4896003,4896193,4896429,4896674,4897204	4833640,4878382,4881040,4881257,4884473,4885002,4885613,4885965,4886198,4886626,4887179,4887790,4889763,4890735,4891124,4891716,4892234,4892768,4893067,4893309,4893597,4894093,4894311,4894633,4895242,4895493,4895832,4896103,4896342,4896588,4896813,4898054	Gene ID= ENSG00000141503.15 TPM= 32.11 Transcript Type= protein_coding
chr17	4833388	4898053	4833388	4898053	+	ENST00000355280.10@MINK1	ENST00000355280.10	protein_coding	4833388,4878317,4880984,4881132,4884363,4884912,4885483,4885911,4886120,4886451,4887110,4887580,4889647,4890517,4890951,4891456,4892149,4892402,4892656,4892979,4893434,4893988,4894174,4894525,4895075,4895350,4895698,4896003,4896193,4896429,4896674,4897204	4833640,4878382,4881040,4881257,4884473,4885002,4885613,4885965,4886198,4886626,4887179,4887790,4889763,4890735,4891124,4891716,4892234,4892512,4892768,4893067,4893597,4894093,4894311,4894633,4895242,4895493,4895832,4896103,4896342,4896588,4896813,4898053	Gene ID= ENSG00000141503.15 TPM= 106.83 Transcript Type= protein_coding
chr17	4899536	4902932	4899536	4902932	+	ENST00000381365.3@C17orf107	ENST00000381365.3	protein_coding	4899536,4899936,4900237	4899828,4900145,4902932	Gene ID= ENSG00000205710.3 TPM= 1.17 Transcript Type= protein_coding
chr17	4937130	4940251	4937130	4940251	-	ENST00000225665.11@SLC25A11	ENST00000225665.11	protein_coding	4939816,4939060,4938769,4938512,4938339,4938154,4938023,4937130	4940251,4939212,4938975,4938602,4938429,4938253,4938074,4937896	Gene ID= ENSG00000108528.13 TPM= 161.13 Transcript Type= protein_coding
chr17	4937317	4940091	4937317	4940091	-	transcript709.chr17.nic@SLC25A11	transcript709.chr17.nic	protein_coding	4939816,4938769,4938512,4938339,4938154,4938023,4937317	4940091,4939212,4938602,4938429,4938253,4938074,4937896	Gene ID= ENSG00000108528.13 TPM= 5.84 Transcript Type= NA
chr17	4937317	4940030	4937317	4940030	-	ENST00000574710.1@SLC25A11	ENST00000574710.1	protein_coding	4938769,4938512,4938339,4938154,4938023,4937317	4940030,4938602,4938429,4938253,4938074,4937896	Gene ID= ENSG00000108528.13 TPM= 25.69 Transcript Type= retained_intron
chr17	4940230	4945222	4940230	4945222	+	transcript696.chr17.nic@RNF167	transcript696.chr17.nic	protein_coding	4940230,4940487,4940873,4941077,4942341,4942577,4942851,4943179,4943426,4944558,4944715	4940360,4940726,4940993,4941157,4942466,4942664,4942941,4943284,4943519,4944638,4945222	Gene ID= ENSG00000108523.15 TPM= 6.13 Transcript Type= NA
chr17	4940062	4945222	4940062	4945222	+	transcript699.chr17.nic@RNF167	transcript699.chr17.nic	protein_coding	4940062,4940487,4941077,4942341,4942577,4942851,4943179,4943426,4944558,4944715	4940230,4940993,4941157,4942466,4942664,4942941,4943284,4943519,4944638,4945222	Gene ID= ENSG00000108523.15 TPM= 3.79 Transcript Type= NA
chr17	4940102	4945222	4940102	4945222	+	transcript702.chr17.nic@RNF167	transcript702.chr17.nic	protein_coding	4940102,4940873,4941077,4942341,4942577,4942851,4943179,4943426,4944558,4944715	4940360,4940993,4941157,4942466,4942664,4942941,4943284,4943519,4944638,4945222	Gene ID= ENSG00000108523.15 TPM= 4.96 Transcript Type= NA
chr17	4940128	4945222	4940128	4945222	+	ENST00000262482.10@RNF167	ENST00000262482.10	protein_coding	4940128,4940487,4941077,4942341,4942577,4942851,4943179,4943426,4944558,4944715	4940360,4940993,4941157,4942466,4942664,4942941,4943284,4943519,4944638,4945222	Gene ID= ENSG00000108523.15 TPM= 34.15 Transcript Type= protein_coding
chr17	4940381	4945191	4940381	4945191	+	ENST00000575111.5@RNF167	ENST00000575111.5	protein_coding	4940381,4941077,4942341,4942577,4942851,4943179,4943426,4944558,4944715	4940993,4941157,4942466,4942664,4942941,4943284,4943519,4944638,4945191	Gene ID= ENSG00000108523.15 TPM= 2.34 Transcript Type= protein_coding
chr17	4945652	4949014	4945652	4949014	-	ENST00000225655.5@PFN1	ENST00000225655.5	protein_coding	4948263,4946628,4945652	4949014,4946820,4945997	Gene ID= ENSG00000108518.7 TPM= 661.44 Transcript Type= protein_coding
chr17	4950115	4957129	4950115	4957129	+	transcript753.chr17.nic@ENO3	transcript753.chr17.nic	protein_coding	4950115,4951828,4952795,4953051,4953272,4953712,4955075,4955407,4955942,4956573,4956831,4956978	4950630,4951914,4952890,4953109,4953341,4953845,4955297,4955604,4956143,4956681,4956889,4957129	Gene ID= ENSG00000108515.17 TPM= 4.67 Transcript Type= NA
chr17	4959228	4967872	4959228	4967872	-	ENST00000206020.7@SPAG7	ENST00000206020.7	protein_coding	4967720,4960786,4960459,4960234,4960022,4959760,4959228	4967872,4960853,4960547,4960318,4960111,4959916,4959643	Gene ID= ENSG00000091640.7 TPM= 60.13 Transcript Type= protein_coding
chr17	4959226	4967790	4959226	4967790	-	ENST00000575142.5@SPAG7	ENST00000575142.5	protein_coding	4967720,4960786,4960459,4960234,4960022,4959226	4967790,4960853,4960547,4960318,4960111,4959916	Gene ID= ENSG00000091640.7 TPM= 4.09 Transcript Type= protein_coding
chr17	4967998	4987652	4967998	4987652	-	ENST00000348066.7@CAMTA2	ENST00000348066.7	protein_coding	4987593,4986192,4985880,4982976,4982757,4982089,4981678,4981225,4979684,4978504,4977058,4974385,4973585,4973175,4972769,4972232,4970340,4969902,4969630,4969500,4969150,4968907,4967998	4987652,4986286,4985983,4983043,4982892,4982160,4981831,4981359,4980621,4978630,4977192,4974500,4973769,4973253,4972991,4972536,4970536,4970085,4969701,4969520,4969337,4968981,4968819	Gene ID= ENSG00000108509.20 TPM= 51.37 Transcript Type= protein_coding
chr17	4988130	4998174	4988130	4998174	-	transcript761.chr17.nnic@INCA1	transcript761.chr17.nnic	protein_coding	4997496,4994394,4990152,4989890,4989428,4988779,4988130	4998174,4994475,4990265,4989929,4989624,4988944,4988554	Gene ID= ENSG00000196388.8 TPM= 3.5 Transcript Type= NA
chr17	4997691	5024703	4997691	5024703	+	transcript724.chr17.nic@KIF1C	transcript724.chr17.nic	protein_coding	4997691,4999013,4999850,5000220,5000772,5001222,5002059,5002464,5002731,5003612,5003851,5003998,5004567,5004855,5006915,5007263,5007467,5013653,5014743,5019996,5020492,5020806,5022092,5023468	4998156,4999046,4999970,5000352,5000848,5001401,5002124,5002642,5002842,5003689,5003916,5004073,5004645,5005000,5007084,5007342,5007542,5013732,5014837,5020079,5020678,5020878,5022709,5024703	Gene ID= ENSG00000129250.11 TPM= 43.2 Transcript Type= NA
chr17	4997948	5028401	4997948	5028401	+	ENST00000320785.9@KIF1C	ENST00000320785.9	protein_coding	4997948,4999850,5000220,5000772,5001222,5002059,5002464,5002731,5003612,5003851,5003998,5004567,5004855,5006915,5007263,5007467,5013653,5014743,5019996,5020492,5020806,5022092,5023468	4998156,4999970,5000352,5000848,5001401,5002124,5002642,5002842,5003689,5003916,5004073,5004645,5005000,5007084,5007342,5007542,5013732,5014837,5020079,5020678,5020878,5022709,5028401	Gene ID= ENSG00000129250.11 TPM= 9.92 Transcript Type= protein_coding
chr17	5078248	5096374	5078248	5096374	+	ENST00000318833.3@ZFP3	ENST00000318833.3	protein_coding	5078248,5091497	5078575,5096374	Gene ID= ENSG00000180787.5 TPM= 16.35 Transcript Type= protein_coding
chr17	5105635	5123102	5105635	5123102	-	ENST00000250076.7@ZNF232	ENST00000250076.7	protein_coding	5122977,5111800,5109394,5108926,5105635	5123102,5112351,5109868,5109052,5106533	Gene ID= ENSG00000167840.13 TPM= 2.34 Transcript Type= protein_coding
chr17	5105735	5112064	5105735	5112064	-	ENST00000574735.1@ZNF232	ENST00000574735.1	protein_coding	5111800,5108926,5105735	5112064,5109768,5106533	Gene ID= ENSG00000167840.13 TPM= 1.17 Transcript Type= retained_intron
chr17	5111932	5114377	5111932	5114377	+	ENST00000413077.1@AC012146.1	ENST00000413077.1	processed_transcript	5111932,5113386,5114158	5112118,5113452,5114377	Gene ID= ENSG00000234327.7 TPM= 5.84 Transcript Type= antisense_RNA
chr17	5208961	5234860	5208961	5234860	-	ENST00000574081.5@SCIMP	ENST00000574081.5	protein_coding	5234735,5223333,5221287,5214925,5208961	5234860,5223456,5221350,5214998,5210955	Gene ID= ENSG00000161929.14 TPM= 3.5 Transcript Type= protein_coding
chr17	5210150	5234860	5210150	5234860	-	ENST00000399600.8@SCIMP	ENST00000399600.8	protein_coding	5234735,5223354,5221287,5214925,5210150	5234860,5223456,5221350,5214998,5210955	Gene ID= ENSG00000161929.14 TPM= 4.67 Transcript Type= protein_coding
chr17	5282300	5385812	5282300	5385812	+	ENST00000537505.5@RABEP1	ENST00000537505.5	protein_coding	5282300,5308694,5331949,5335184,5338019,5346790,5350451,5354359,5361208,5362912,5365122,5368370,5373314,5377116,5378177,5380364,5381389,5383122	5282520,5308822,5332152,5335344,5338138,5346925,5350629,5354490,5361675,5363016,5365238,5368468,5373454,5377305,5378232,5380462,5381505,5385812	Gene ID= ENSG00000029725.16 TPM= 52.54 Transcript Type= protein_coding
chr17	5386026	5420160	5386026	5420160	-	ENST00000573584.5@NUP88	ENST00000573584.5	protein_coding	5419354,5416513,5414009,5410703,5408733,5405057,5404099,5399552,5394891,5391561,5388802,5387779,5387605,5387386,5386984,5386708,5386026	5420160,5416682,5414134,5410789,5408909,5405243,5404246,5399650,5394981,5391662,5388960,5387904,5387670,5387466,5387110,5386826,5386269	Gene ID= ENSG00000108559.11 TPM= 9.92 Transcript Type= protein_coding
chr17	5386102	5419662	5386102	5419662	-	transcript819.chr17.nnic@NUP88	transcript819.chr17.nnic	protein_coding	5419354,5416513,5414009,5410703,5408733,5405057,5404099,5399552,5394891,5391561,5387779,5387605,5387386,5386984,5386708,5386102	5419662,5416682,5414134,5410789,5408909,5405243,5404246,5399650,5394981,5391662,5387904,5387670,5387466,5387110,5386826,5386269	Gene ID= ENSG00000108559.11 TPM= 2.92 Transcript Type= NA
chr17	5386102	5419466	5386102	5419466	-	ENST00000225696.8@NUP88	ENST00000225696.8	protein_coding	5419354,5416513,5414009,5410703,5408733,5405057,5404099,5399552,5394891,5391561,5388802,5387779,5387605,5387386,5386984,5386708,5386102	5419466,5416682,5414134,5410789,5408909,5405243,5404246,5399650,5394981,5391662,5388960,5387952,5387670,5387466,5387110,5386826,5386269	Gene ID= ENSG00000108559.11 TPM= 1.17 Transcript Type= protein_coding
chr17	5419641	5432876	5419641	5432876	+	ENST00000381209.7@RPAIN	ENST00000381209.7	protein_coding	5419641,5421296,5422769,5425971,5426236,5428071,5432542	5420291,5421466,5422829,5426082,5426299,5428211,5432876	Gene ID= ENSG00000129197.14 TPM= 21.89 Transcript Type= protein_coding
chr17	5419641	5432876	5419641	5432876	+	ENST00000381208.9@RPAIN	ENST00000381208.9	protein_coding	5419641,5421296,5422769,5425971,5426236,5432542	5420291,5421466,5422829,5426082,5426299,5432876	Gene ID= ENSG00000129197.14 TPM= 9.05 Transcript Type= protein_coding
chr17	5419641	5432876	5419641	5432876	+	ENST00000571613.5@RPAIN	ENST00000571613.5	protein_coding	5419641,5421296,5422769,5425971,5428071,5432542	5420291,5421466,5422829,5426299,5428211,5432876	Gene ID= ENSG00000129197.14 TPM= 11.38 Transcript Type= retained_intron
chr17	5419641	5432876	5419641	5432876	+	ENST00000571558.5@RPAIN	ENST00000571558.5	protein_coding	5419641,5421296,5422769,5426236,5428071,5432542	5420291,5421466,5422829,5426299,5428211,5432876	Gene ID= ENSG00000129197.14 TPM= 7.88 Transcript Type= nonsense_mediated_decay
chr17	5419641	5432715	5419641	5432715	+	ENST00000536255.6@RPAIN	ENST00000536255.6	protein_coding	5419641,5421296,5422769,5432542	5420291,5421466,5422829,5432715	Gene ID= ENSG00000129197.14 TPM= 3.5 Transcript Type= protein_coding
chr17	5420200	5432704	5420200	5432704	+	ENST00000573126.1@RPAIN	ENST00000573126.1	protein_coding	5420200,5421296,5422769,5425971,5432542	5420291,5421466,5422829,5428211,5432704	Gene ID= ENSG00000129197.14 TPM= 3.5 Transcript Type= retained_intron
chr17	5432777	5439155	5432777	5439155	-	ENST00000225698.8@C1QBP	ENST00000225698.8	protein_coding	5438842,5438123,5434873,5433669,5433293,5432777	5439155,5438273,5434966,5433767,5433415,5433164	Gene ID= ENSG00000108561.8 TPM= 203.16 Transcript Type= protein_coding
chr17	5471251	5486217	5471251	5486217	-	ENST00000158771.8@DERL2	ENST00000158771.8	protein_coding	5486069,5485151,5482809,5481296,5480387,5480054,5471251	5486217,5485216,5482882,5481389,5480582,5480144,5474789	Gene ID= ENSG00000072849.10 TPM= 8.76 Transcript Type= protein_coding
chr17	5474309	5486194	5474309	5486194	-	transcript863.chr17.nic@DERL2	transcript863.chr17.nic	protein_coding	5486069,5485151,5482809,5481101,5480387,5480054,5474309	5486194,5485216,5482882,5481389,5480543,5480144,5474789	Gene ID= ENSG00000072849.10 TPM= 2.34 Transcript Type= NA
chr17	5471251	5486194	5471251	5486194	-	transcript866.chr17.nic@DERL2	transcript866.chr17.nic	protein_coding	5486069,5485151,5482809,5481101,5480054,5471251	5486194,5485216,5482882,5481389,5480144,5474789	Gene ID= ENSG00000072849.10 TPM= 5.25 Transcript Type= NA
chr17	5486374	5490808	5486374	5490808	+	ENST00000611091.4@MIS12	ENST00000611091.4	protein_coding	5486374,5488196,5488823	5486684,5488589,5490808	Gene ID= ENSG00000167842.15 TPM= 9.34 Transcript Type= protein_coding
chr17	5499426	5500574	5499426	5500574	-	transcript911.chr17.nnic@NA	transcript911.chr17.nnic	NA	5499426	5500574	Gene ID= novel_gene_chr17_912 TPM= 3.5 Transcript Type= NA
chr17	5499439	5584511	5499439	5584511	-	transcript883.chr17.nnic@NLRP1	transcript883.chr17.nnic	protein_coding	5583687,5582670,5581859,5558339,5553386,5541857,5539415,5536851,5533897,5533304,5532822,5530481,5521524,5520881,5517746,5501737,5500031,5499439	5584511,5582846,5582062,5560043,5553556,5542027,5539585,5536940,5533988,5533384,5532984,5530704,5521786,5521012,5517887,5501872,5500112,5499950	Gene ID= ENSG00000091592.15 TPM= 2.72 Transcript Type= NA
chr17	5514123	5584511	5514123	5584511	-	transcript894.chr17.nnic@NLRP1	transcript894.chr17.nnic	protein_coding	5583687,5582670,5581859,5558339,5553386,5541857,5539415,5536851,5533897,5533304,5532822,5530481,5521524,5520881,5517746,5515473,5514123	5584511,5582846,5582062,5560043,5553556,5542027,5539585,5536940,5533988,5533384,5532984,5530704,5521786,5521012,5517887,5515517,5515044	Gene ID= ENSG00000091592.15 TPM= 8.56 Transcript Type= NA
chr17	5501385	5584531	5501385	5584531	-	ENST00000262467.9@NLRP1	ENST00000262467.9	protein_coding	5583687,5582670,5581859,5558339,5553386,5541857,5539415,5536851,5533897,5533292,5532822,5530481,5521524,5520881,5517746,5501385	5584531,5582846,5582062,5560043,5553556,5542027,5539585,5536940,5533988,5533384,5532984,5530704,5521786,5521012,5517887,5501872	Gene ID= ENSG00000091592.15 TPM= 1.55 Transcript Type= protein_coding
chr17	5499439	5501145	5499439	5501145	-	ENST00000568641.1@NLRP1	ENST00000568641.1	protein_coding	5500031,5499439	5501145,5499950	Gene ID= ENSG00000091592.15 TPM= 4.67 Transcript Type= processed_transcript
chr17	6444415	6451469	6444415	6451469	+	ENST00000572447.5@PIMREG	ENST00000572447.5	protein_coding	6444415,6445076,6447463,6449312,6450028,6450362	6444488,6445404,6447758,6449407,6450072,6451469	Gene ID= ENSG00000129195.15 TPM= 2.34 Transcript Type= protein_coding
chr17	6578151	6640927	6578151	6640927	-	ENST00000361413.7@KIAA0753	ENST00000361413.7	protein_coding	6640637,6635011,6628117,6624755,6623509,6622882,6620788,6611919,6609994,6608348,6607181,6606873,6600380,6599237,6596158,6594972,6590510,6589779,6578151	6640927,6635171,6628741,6624861,6623571,6623097,6620998,6612148,6610160,6608464,6607270,6606962,6600458,6599320,6596343,6595053,6590630,6590003,6579864	Gene ID= ENSG00000198920.9 TPM= 5.84 Transcript Type= protein_coding
chr17	6640758	6644541	6640758	6644541	+	ENST00000250101.9@TXNDC17	ENST00000250101.9	protein_coding	6640758,6641753,6642249,6642951	6641227,6641834,6642324,6644541	Gene ID= ENSG00000129235.10 TPM= 30.36 Transcript Type= protein_coding
chr17	6641024	6643123	6641024	6643123	+	ENST00000574429.1@TXNDC17	ENST00000574429.1	protein_coding	6641024	6643123	Gene ID= ENSG00000129235.10 TPM= 1.17 Transcript Type= retained_intron
chr17	6640985	6643067	6640985	6643067	+	ENST00000576020.5@TXNDC17	ENST00000576020.5	protein_coding	6640985,6641753,6642249,6642951	6641100,6641834,6642324,6643067	Gene ID= ENSG00000129235.10 TPM= 1.17 Transcript Type= processed_transcript
chr17	6641016	6643114	6641016	6643114	+	ENST00000570330.5@TXNDC17	ENST00000570330.5	protein_coding	6641016,6641753,6642249,6642951	6641152,6641834,6642324,6643114	Gene ID= ENSG00000129235.10 TPM= 3.5 Transcript Type= protein_coding
chr17	6649207	6654931	6649207	6654931	-	transcript928.chr17.nnic@MED31	transcript928.chr17.nnic	protein_coding	6654891,6651501,6649207	6654931,6652352,6650433	Gene ID= ENSG00000108590.10 TPM= 4.67 Transcript Type= NA
chr17	6651730	6653296	6651730	6653296	+	transcript933.chr17.nnic@NA	transcript933.chr17.nnic	NA	6651730	6653296	Gene ID= novel_gene_chr17_934 TPM= 3.5 Transcript Type= NA
chr17	6994757	7012528	6994757	7012528	-	transcript967.chr17.nnic@ALOX12-AS1	transcript967.chr17.nnic	antisense_RNA	7012196,7009796,7002484,6994757	7012528,7009889,7002620,6997081	Gene ID= ENSG00000215067.9 TPM= 11.68 Transcript Type= NA
chr17	7012417	7014532	7012417	7014532	+	ENST00000548577.5@RNASEK	ENST00000548577.5	protein_coding	7012417,7013666,7014145	7012761,7013742,7014532	Gene ID= ENSG00000219200.11 TPM= 221.26 Transcript Type= protein_coding
chr17	7012632	7014532	7012632	7014532	+	ENST00000552039.2@RNASEK	ENST00000552039.2	protein_coding	7012632,7013666,7014145	7012757,7013742,7014532	Gene ID= ENSG00000219200.11 TPM= 35.61 Transcript Type= protein_coding
chr17	7012646	7014532	7012646	7014532	+	ENST00000552176.2@RNASEK	ENST00000552176.2	protein_coding	7012646,7014145	7013742,7014532	Gene ID= ENSG00000219200.11 TPM= 7.01 Transcript Type= retained_intron
chr17	7012622	7014330	7012622	7014330	+	ENST00000570898.1@RNASEK	ENST00000570898.1	protein_coding	7012622,7013644,7014145	7012761,7013742,7014330	Gene ID= ENSG00000219200.11 TPM= 3.5 Transcript Type= protein_coding
chr17	7012660	7017520	7012660	7017520	+	ENST00000547863.5@RNASEK-C17orf49	ENST00000547863.5	protein_coding	7012660,7013666,7014145,7015062,7015774,7016495,7016910,7017261	7012757,7013742,7014878,7015156,7015875,7016685,7017014,7017520	Gene ID= ENSG00000161939.19 TPM= 34.25 Transcript Type= retained_intron
chr17	7014769	7017519	7014769	7017519	+	ENST00000552402.5@C17orf49	ENST00000552402.5	protein_coding	7014769,7015062,7016495,7016910,7017261	7014878,7015156,7016685,7017014,7017519	Gene ID= ENSG00000258315.5 TPM= 3.3 Transcript Type= protein_coding
chr17	7014753	7017506	7014753	7017506	+	ENST00000546760.5@C17orf49	ENST00000546760.5	protein_coding	7014753,7015062,7015774,7016495,7017257	7014878,7015156,7015875,7016685,7017506	Gene ID= ENSG00000258315.5 TPM= 2.34 Transcript Type= protein_coding
chr17	7014782	7017520	7014782	7017520	+	ENST00000439424.6@C17orf49	ENST00000439424.6	protein_coding	7014782,7015062,7015774,7016495,7016910,7017261	7014878,7015156,7015875,7016685,7017014,7017520	Gene ID= ENSG00000258315.5 TPM= 18.48 Transcript Type= protein_coding
chr17	7015818	7019630	7015818	7019630	-	ENST00000443997.1@MIR497HG	ENST00000443997.1	antisense_RNA	7019378,7017069,7015818	7019630,7017388,7016014	Gene ID= ENSG00000267532.5 TPM= 7.01 Transcript Type= antisense_RNA
chr17	7023020	7029642	7023020	7029642	+	ENST00000293805.9@BCL6B	ENST00000293805.9	protein_coding	7023020,7023660,7024083,7024401,7025076,7026457,7026705,7026950,7027503	7023099,7023850,7024304,7024763,7025200,7026621,7026835,7027087,7029642	Gene ID= ENSG00000161940.10 TPM= 26.85 Transcript Type= protein_coding
chr17	7041630	7043935	7041630	7043935	-	transcript980.chr17.nic@SLC16A11	transcript980.chr17.nic	protein_coding	7043775,7043312,7042930,7041996,7041630	7043935,7043519,7043073,7042763,7041908	Gene ID= ENSG00000174326.11 TPM= 9.34 Transcript Type= NA
chr17	7041630	7043912	7041630	7043912	-	transcript985.chr17.nic@SLC16A11	transcript985.chr17.nic	protein_coding	7041996,7041630	7043912,7041908	Gene ID= ENSG00000174326.11 TPM= 3.5 Transcript Type= NA
chr17	7074796	7080251	7074796	7080251	-	transcript993.chr17.nnic@CLEC10A	transcript993.chr17.nnic	protein_coding	7080052,7078746,7077997,7076892,7076733,7075976,7075731,7075360,7074796	7080251,7078885,7078113,7076987,7076804,7076152,7075885,7075454,7075222	Gene ID= ENSG00000132514.13 TPM= 2.34 Transcript Type= NA
chr17	7074537	7080307	7074537	7080307	-	ENST00000254868.8@CLEC10A	ENST00000254868.8	protein_coding	7080052,7078746,7077997,7076892,7076733,7075985,7075731,7075360,7074537	7080307,7078885,7078113,7076987,7076804,7076152,7075885,7075466,7075222	Gene ID= ENSG00000132514.13 TPM= 1.17 Transcript Type= protein_coding
chr17	7074566	7080266	7074566	7080266	-	ENST00000416562.6@CLEC10A	ENST00000416562.6	protein_coding	7080052,7078746,7077997,7076892,7076733,7075985,7075731,7075360,7074566	7080266,7078885,7078113,7076987,7076804,7076071,7075885,7075466,7075222	Gene ID= ENSG00000132514.13 TPM= 1.17 Transcript Type= protein_coding
chr17	7074796	7080283	7074796	7080283	-	ENST00000571664.1@CLEC10A	ENST00000571664.1	protein_coding	7080052,7078746,7077997,7076892,7076733,7075976,7075731,7075360,7074796	7080283,7078885,7078113,7076987,7076804,7076071,7075885,7075466,7075222	Gene ID= ENSG00000132514.13 TPM= 10.51 Transcript Type= protein_coding
chr17	7074795	7080248	7074795	7080248	-	ENST00000576617.5@CLEC10A	ENST00000576617.5	protein_coding	7080052,7078746,7077997,7076892,7076733,7075985,7074795	7080248,7078885,7078113,7076987,7076804,7076071,7075885	Gene ID= ENSG00000132514.13 TPM= 1.17 Transcript Type= protein_coding
chr17	7101322	7114823	7101322	7114823	-	ENST00000254850.11@ASGR2	ENST00000254850.11	protein_coding	7114615,7114174,7108772,7108462,7107836,7107231,7107000,7102090,7101322	7114823,7114310,7108888,7108557,7107907,7107317,7107151,7102196,7101740	Gene ID= ENSG00000161944.16 TPM= 1.17 Transcript Type= protein_coding
chr17	7173431	7179564	7173431	7179564	-	ENST00000269299.7@ASGR1	ENST00000269299.7	protein_coding	7179190,7178494,7177210,7176981,7176830,7174374,7174138,7173961,7173431	7179564,7178588,7177326,7177076,7176901,7174460,7174289,7174067,7173833	Gene ID= ENSG00000141505.11 TPM= 1.17 Transcript Type= protein_coding
chr17	7189890	7217339	7189890	7217339	-	ENST00000399506.6@DLG4	ENST00000399506.6	protein_coding	7217118,7208174,7204199,7204008,7203692,7203424,7203193,7202903,7196757,7196473,7196220,7194319,7193964,7193844,7193667,7193483,7192945,7191893,7191267,7189890	7217339,7208239,7204252,7204067,7203816,7203593,7203329,7203047,7197052,7196575,7196334,7194495,7194000,7193871,7193714,7193584,7193117,7192002,7191358,7190814	Gene ID= ENSG00000132535.18 TPM= 12.84 Transcript Type= protein_coding
chr17	7219806	7225273	7219806	7225273	+	ENST00000356839.9@ACADVL	ENST00000356839.9	protein_coding	7219806,7220122,7220464,7220604,7220766,7220924,7221538,7221952,7222177,7222667,7223133,7223644,7223813,7223968,7224146,7224321,7224480,7224642,7224809,7224957	7220046,7220197,7220529,7220676,7220830,7221058,7221682,7222081,7222302,7222865,7223237,7223730,7223875,7224069,7224243,7224393,7224552,7224714,7224884,7225273	Gene ID= ENSG00000072778.19 TPM= 391.89 Transcript Type= protein_coding
chr17	7219846	7225266	7219846	7225266	+	transcript1024.chr17.nic@ACADVL	transcript1024.chr17.nic	protein_coding	7219846,7220122,7220464,7220604,7220766,7220924,7221538,7221952,7222177,7222667,7223644,7223813,7223968,7224146,7224321,7224480,7224642,7224809,7224957	7220046,7220197,7220529,7220676,7220830,7221058,7221682,7222081,7222302,7223237,7223730,7223875,7224069,7224243,7224393,7224552,7224714,7224884,7225266	Gene ID= ENSG00000072778.19 TPM= 120.37 Transcript Type= NA
chr17	7219846	7225266	7219846	7225266	+	transcript1035.chr17.nic@ACADVL	transcript1035.chr17.nic	protein_coding	7219846,7220122,7220464,7220604,7220766,7220924,7221538,7221952,7222667,7223644,7223813,7223968,7224146,7224321,7224480,7224642,7224809,7224957	7220046,7220197,7220529,7220676,7220830,7221058,7221682,7222302,7223237,7223730,7223875,7224069,7224243,7224393,7224552,7224714,7224884,7225266	Gene ID= ENSG00000072778.19 TPM= 80.09 Transcript Type= NA
chr17	7219846	7225266	7219846	7225266	+	transcript1047.chr17.nic@ACADVL	transcript1047.chr17.nic	protein_coding	7219846,7220122,7220464,7220604,7220766,7220924,7221538,7221952,7223644,7223813,7223968,7224146,7224321,7224480,7224642,7224809,7224957	7220046,7220197,7220529,7220676,7220830,7221058,7221682,7223237,7223730,7223875,7224069,7224243,7224393,7224552,7224714,7224884,7225266	Gene ID= ENSG00000072778.19 TPM= 119.2 Transcript Type= NA
chr17	7219863	7225264	7219863	7225264	+	ENST00000350303.9@ACADVL	ENST00000350303.9	protein_coding	7219863,7220122,7220604,7220766,7220924,7221538,7221952,7222177,7222667,7223133,7223644,7223813,7223968,7224146,7224321,7224480,7224642,7224809,7224957	7220046,7220197,7220676,7220830,7221058,7221682,7222081,7222302,7222865,7223237,7223730,7223875,7224069,7224243,7224393,7224552,7224714,7224884,7225264	Gene ID= ENSG00000072778.19 TPM= 13.57 Transcript Type= protein_coding
chr17	7219844	7225265	7219844	7225265	+	ENST00000322910.9@ACADVL	ENST00000322910.9	protein_coding	7219844,7220464,7220604,7220766,7220924,7221538,7221952,7222177,7222667,7223133,7223644,7223813,7223968,7224146,7224321,7224480,7224642,7224809,7224957	7220197,7220529,7220676,7220830,7221058,7221682,7222081,7222302,7222865,7223237,7223730,7223875,7224069,7224243,7224393,7224552,7224714,7224884,7225265	Gene ID= ENSG00000072778.19 TPM= 30.88 Transcript Type= nonsense_mediated_decay
chr17	7224489	7225266	7224489	7225266	+	ENST00000583848.5@ACADVL	ENST00000583848.5	protein_coding	7224489,7224662,7224809,7224957	7224552,7224714,7224884,7225266	Gene ID= ENSG00000072778.19 TPM= 6.67 Transcript Type= nonsense_mediated_decay
chr17	7224633	7225266	7224633	7225266	+	ENST00000578033.1@ACADVL	ENST00000578033.1	protein_coding	7224633,7224957	7224884,7225266	Gene ID= ENSG00000072778.19 TPM= 2.34 Transcript Type= retained_intron
chr17	7225341	7234545	7225341	7234545	-	ENST00000005340.9@DVL2	ENST00000005340.9	protein_coding	7234069,7230728,7230285,7230046,7229808,7229588,7229378,7229135,7228969,7227977,7227655,7227404,7227090,7226421,7225341	7234545,7230797,7230430,7230155,7229943,7229678,7229447,7229274,7229045,7228044,7227783,7227535,7227269,7226639,7226313	Gene ID= ENSG00000004975.11 TPM= 79.35 Transcript Type= protein_coding
chr17	7235038	7238292	7235038	7238292	-	transcript1101.chr17.nic@PHF23	transcript1101.chr17.nic	protein_coding	7238053,7237629,7237385,7235930,7235038	7238292,7237660,7237477,7236767,7235840	Gene ID= ENSG00000040633.12 TPM= 10.51 Transcript Type= NA
chr17	7235028	7239506	7235028	7239506	-	ENST00000320316.7@PHF23	ENST00000320316.7	protein_coding	7239246,7237629,7237385,7235930,7235028	7239506,7237660,7237477,7236767,7235840	Gene ID= ENSG00000040633.12 TPM= 24.52 Transcript Type= protein_coding
chr17	7235029	7239439	7235029	7239439	-	ENST00000571362.5@PHF23	ENST00000571362.5	protein_coding	7239246,7237629,7237385,7235930,7235029	7239439,7237660,7237477,7236566,7235840	Gene ID= ENSG00000040633.12 TPM= 4.67 Transcript Type= protein_coding
chr17	7240014	7242770	7240014	7242770	-	ENST00000302386.9@GABARAP	ENST00000302386.9	protein_coding	7242241,7241601,7241342,7240014	7242770,7241679,7241460,7240919	Gene ID= ENSG00000170296.9 TPM= 329.26 Transcript Type= protein_coding
chr17	7243591	7251512	7243591	7251512	-	transcript1110.chr17.nic@CTDNEP1	transcript1110.chr17.nic	protein_coding	7251195,7247277,7247064,7246791,7246254,7246026,7244551,7244189,7243591	7251512,7247343,7247182,7246862,7246370,7246137,7244635,7244245,7243951	Gene ID= ENSG00000175826.11 TPM= 3.89 Transcript Type= NA
chr17	7243618	7252081	7243618	7252081	-	ENST00000573600.5@CTDNEP1	ENST00000573600.5	protein_coding	7251965,7251195,7247277,7247064,7246791,7246254,7246026,7244551,7243618	7252081,7251601,7247343,7247182,7246862,7246370,7246137,7244635,7244245	Gene ID= ENSG00000175826.11 TPM= 1.55 Transcript Type= protein_coding
chr17	7243591	7251675	7243591	7251675	-	ENST00000574322.5@CTDNEP1	ENST00000574322.5	protein_coding	7251195,7247277,7247064,7246791,7246254,7246026,7244551,7243591	7251675,7247343,7247182,7246862,7246370,7246137,7244635,7244245	Gene ID= ENSG00000175826.11 TPM= 77.45 Transcript Type= protein_coding
chr17	7252232	7259940	7252232	7259940	+	ENST00000396627.6@ELP5	ENST00000396627.6	protein_coding	7252232,7252426,7252770,7252918,7254583,7256857,7258588,7258826,7259571	7252337,7252596,7252830,7252998,7254803,7257038,7258683,7258926,7259940	Gene ID= ENSG00000170291.14 TPM= 4.67 Transcript Type= protein_coding
chr17	7252286	7259940	7252286	7259940	+	ENST00000396628.6@ELP5	ENST00000396628.6	protein_coding	7252286,7252770,7252918,7254583,7256857,7258588,7258826,7259571	7252596,7252830,7252998,7254803,7257038,7258683,7258926,7259940	Gene ID= ENSG00000170291.14 TPM= 7.01 Transcript Type= protein_coding
chr17	7252286	7259940	7252286	7259940	+	ENST00000574993.5@ELP5	ENST00000574993.5	protein_coding	7252286,7252770,7252918,7254583,7256857,7258588	7252596,7252830,7252998,7254803,7257038,7259940	Gene ID= ENSG00000170291.14 TPM= 4.67 Transcript Type= protein_coding
chr17	7259903	7262478	7259903	7262478	-	ENST00000360325.11@CLDN7	ENST00000360325.11	protein_coding	7261821,7260821,7260642,7259903	7262478,7260985,7260726,7260536	Gene ID= ENSG00000181885.18 TPM= 36.78 Transcript Type= protein_coding
chr17	7259903	7262474	7259903	7262474	-	transcript1149.chr17.nic@CLDN7	transcript1149.chr17.nic	protein_coding	7260821,7259903	7262474,7260726	Gene ID= ENSG00000181885.18 TPM= 3.5 Transcript Type= NA
chr17	7260137	7263213	7260137	7263213	-	ENST00000397317.8@CLDN7	ENST00000397317.8	protein_coding	7263159,7261821,7260821,7260642,7260137	7263213,7262343,7260985,7260726,7260536	Gene ID= ENSG00000181885.18 TPM= 23.35 Transcript Type= protein_coding
chr17	7281667	7288257	7281667	7288257	+	ENST00000317370.12@SLC2A4	ENST00000317370.12	protein_coding	7281667,7283245,7283473,7283738,7283974,7284217,7284485,7284835,7285088,7285705,7286426	7281967,7283361,7283645,7283862,7284089,7284379,7284672,7284939,7285189,7285908,7288257	Gene ID= ENSG00000181856.14 TPM= 2.34 Transcript Type= protein_coding
chr17	7307373	7312455	7307373	7312455	+	ENST00000336458.12@EIF5A	ENST00000336458.12	protein_coding	7307373,7309615,7311018,7311350,7311578,7311822	7307752,7309800,7311122,7311481,7311651,7312455	Gene ID= ENSG00000132507.17 TPM= 326.83 Transcript Type= protein_coding
chr17	7306999	7312463	7306999	7312463	+	ENST00000336452.11@EIF5A	ENST00000336452.11	protein_coding	7306999,7309615,7311018,7311350,7311578,7311822	7307115,7309800,7311122,7311481,7311651,7312463	Gene ID= ENSG00000132507.17 TPM= 31.82 Transcript Type= protein_coding
chr17	7307974	7312455	7307974	7312455	+	ENST00000419711.6@EIF5A	ENST00000419711.6	protein_coding	7307974,7309615,7311018,7311350,7311578,7311822	7308113,7309800,7311122,7311481,7311651,7312455	Gene ID= ENSG00000132507.17 TPM= 43.11 Transcript Type= protein_coding
chr17	7312659	7315353	7312659	7315353	-	transcript1156.chr17.nic@GPS2	transcript1156.chr17.nic	protein_coding	7315252,7314959,7314488,7314291,7314080,7313906,7313568,7313380,7313212,7313029,7312659	7315353,7315119,7314597,7314403,7314159,7313988,7313721,7313469,7313291,7313124,7312839	Gene ID= ENSG00000132522.15 TPM= 17.42 Transcript Type= NA
chr17	7312662	7315564	7312662	7315564	-	ENST00000380728.6@GPS2	ENST00000380728.6	protein_coding	7315331,7314959,7314488,7314291,7314080,7313906,7313568,7313380,7313212,7313029,7312662	7315564,7315119,7314597,7314403,7314159,7313988,7313721,7313469,7313291,7313124,7312839	Gene ID= ENSG00000132522.15 TPM= 78.14 Transcript Type= protein_coding
chr17	7312660	7315343	7312660	7315343	-	ENST00000389167.9@GPS2	ENST00000389167.9	protein_coding	7314959,7314488,7314291,7314080,7313906,7313568,7313380,7313212,7313029,7312660	7315343,7314597,7314403,7314159,7313988,7313721,7313469,7313291,7313124,7312839	Gene ID= ENSG00000132522.15 TPM= 37.27 Transcript Type= protein_coding
chr17	7312659	7315321	7312659	7315321	-	ENST00000572172.5@GPS2	ENST00000572172.5	protein_coding	7314959,7314488,7314291,7314080,7313568,7313380,7313212,7313029,7312659	7315321,7314597,7314403,7314159,7313988,7313469,7313291,7313124,7312839	Gene ID= ENSG00000132522.15 TPM= 3.5 Transcript Type= retained_intron
chr17	7312659	7315388	7312659	7315388	-	transcript1160.chr17.nic@AC026954.2	transcript1160.chr17.nic	protein_coding	7315331,7314488,7314291,7314080,7313906,7313568,7313380,7313212,7313029,7312659	7315388,7315119,7314403,7314159,7313988,7313721,7313469,7313291,7313124,7312839	Gene ID= ENSG00000261915.6 TPM= 7.3 Transcript Type= NA
chr17	7315628	7329328	7315628	7329328	-	ENST00000399464.6@NEURL4	ENST00000399464.6	protein_coding	7329031,7327440,7327165,7326711,7326437,7326255,7325641,7325209,7324799,7324395,7324108,7323814,7323647,7323485,7322948,7322735,7321865,7321560,7321361,7321112,7320759,7319050,7318495,7318269,7318065,7317788,7317461,7317205,7315628	7329328,7327884,7327230,7327009,7326548,7326343,7325713,7325473,7324980,7324480,7324270,7324012,7323723,7323563,7323123,7322866,7322010,7321787,7321459,7321273,7320923,7319208,7318674,7318356,7318172,7317932,7317573,7317370,7316327	Gene ID= ENSG00000215041.9 TPM= 14.01 Transcript Type= protein_coding
chr17	7336529	7351478	7336529	7351478	+	ENST00000158762.7@ACAP1	ENST00000158762.7	protein_coding	7336529,7337312,7341948,7342275,7342416,7343379,7343706,7343861,7344049,7344539,7346244,7346391,7346808,7347031,7347922,7348127,7348306,7348995,7349945,7350127,7350950,7351295	7336787,7337369,7342067,7342328,7342474,7343562,7343750,7343956,7344123,7344648,7346295,7346491,7346931,7347242,7347991,7348221,7348475,7349167,7350054,7350237,7350999,7351478	Gene ID= ENSG00000072818.11 TPM= 18.68 Transcript Type= protein_coding
chr17	7349736	7352070	7349736	7352070	-	transcript1209.chr17.nnic@NA	transcript1209.chr17.nnic	NA	7349736	7352070	Gene ID= novel_gene_chr17_1210 TPM= 3.5 Transcript Type= NA
chr17	7352162	7354944	7352162	7354944	+	ENST00000333751.4@KCTD11	ENST00000333751.4	protein_coding	7352162	7354944	Gene ID= ENSG00000213859.4 TPM= 21.02 Transcript Type= protein_coding
chr17	7380837	7389737	7380837	7389737	+	ENST00000576812.5@TNK1	ENST00000576812.5	protein_coding	7380837,7382836,7383250,7383425,7383709,7383970,7384484,7386561,7386975,7387378,7388406,7388788,7388971	7381114,7383089,7383320,7383616,7383864,7384253,7384754,7386655,7387154,7387457,7388704,7388883,7389737	Gene ID= ENSG00000174292.12 TPM= 1.75 Transcript Type= protein_coding
chr17	7380534	7389774	7380534	7389774	+	ENST00000570896.5@TNK1	ENST00000570896.5	protein_coding	7380534,7380974,7382836,7383250,7383425,7383709,7383970,7384484,7386561,7386990,7387378,7388406,7388788,7388971	7380747,7381114,7383089,7383320,7383616,7383864,7384253,7384754,7386655,7387154,7387457,7388704,7388883,7389774	Gene ID= ENSG00000174292.12 TPM= 14.59 Transcript Type= protein_coding
chr17	7389727	7394570	7389727	7394570	-	ENST00000324822.15@PLSCR3	ENST00000324822.15	protein_coding	7394477,7394104,7393601,7393467,7393144,7392791,7390634,7389727	7394570,7394159,7393836,7393509,7393364,7392952,7390795,7390441	Gene ID= ENSG00000187838.16 TPM= 8.47 Transcript Type= protein_coding
chr17	7389727	7394842	7389727	7394842	-	ENST00000573070.5@PLSCR3	ENST00000573070.5	protein_coding	7394477,7394104,7393601,7393467,7392791,7390634,7389727	7394842,7394159,7393836,7393509,7392952,7390795,7390441	Gene ID= ENSG00000187838.16 TPM= 3.21 Transcript Type= nonsense_mediated_decay
chr17	7389727	7394544	7389727	7394544	-	transcript1224.chr17.nic@PLSCR3	transcript1224.chr17.nic	protein_coding	7394477,7394104,7393467,7392791,7390634,7389727	7394544,7394267,7393509,7392952,7390795,7390441	Gene ID= ENSG00000187838.16 TPM= 4.38 Transcript Type= NA
chr17	7389730	7394508	7389730	7394508	-	ENST00000571541.5@PLSCR3	ENST00000571541.5	protein_coding	7393601,7393144,7392791,7390634,7389730	7394508,7393509,7392952,7390795,7390441	Gene ID= ENSG00000187838.16 TPM= 7.3 Transcript Type= retained_intron
chr17	7402975	7404137	7402975	7404137	-	ENST00000302422.3@TMEM256	ENST00000302422.3	protein_coding	7404000,7403658,7403310,7402975	7404137,7403689,7403390,7403209	Gene ID= ENSG00000205544.3 TPM= 14.59 Transcript Type= protein_coding
chr17	7402978	7403480	7402978	7403480	-	ENST00000575427.1@TMEM256	ENST00000575427.1	protein_coding	7403310,7402978	7403480,7403209	Gene ID= ENSG00000205544.3 TPM= 1.75 Transcript Type= retained_intron
chr17	7435454	7437523	7435454	7437523	+	ENST00000396568.1@TMEM102	ENST00000396568.1	protein_coding	7435454,7436194	7436085,7437523	Gene ID= ENSG00000181284.2 TPM= 33.86 Transcript Type= protein_coding
chr17	7455594	7457329	7455594	7457329	+	ENST00000575379.1@CHRNB1	ENST00000575379.1	protein_coding	7455594,7456583	7455941,7457329	Gene ID= ENSG00000170175.10 TPM= 1.17 Transcript Type= protein_coding
chr17	7459366	7484263	7459366	7484263	-	ENST00000311403.4@ZBTB4	ENST00000311403.4	protein_coding	7484004,7467257,7465711,7459366	7484263,7467327,7466810,7463890	Gene ID= ENSG00000174282.11 TPM= 74.14 Transcript Type= protein_coding
chr17	7459366	7479625	7459366	7479625	-	ENST00000380599.8@ZBTB4	ENST00000380599.8	protein_coding	7479456,7467257,7465711,7459366	7479625,7467327,7466810,7463890	Gene ID= ENSG00000174282.11 TPM= 91.66 Transcript Type= protein_coding
chr17	7484332	7513552	7484332	7513552	+	transcript1229.chr17.nnic@POLR2A	transcript1229.chr17.nnic	protein_coding	7484332,7495941,7496210,7496440,7496764,7497356,7497650,7498078,7499031,7499276,7500637,7500940,7501289,7501526,7501885,7502515,7503121,7503385,7503586,7508251,7508944,7509529,7511213,7511404,7511811,7512158,7512477,7512774,7513021	7484857,7496073,7496346,7496613,7497045,7497517,7497870,7498203,7499158,7499491,7500848,7501108,7501383,7501722,7502122,7502701,7503292,7503490,7503791,7508475,7509190,7509632,7511319,7511588,7512014,7512344,7512590,7512923,7513552	Gene ID= ENSG00000181222.15 TPM= 4.09 Transcript Type= NA
chr17	7484366	7514616	7484366	7514616	+	ENST00000617998.4@POLR2A	ENST00000617998.4	protein_coding	7484366,7495941,7496210,7496440,7496764,7497356,7497650,7498078,7499039,7499281,7500639,7500940,7501289,7501526,7501900,7502518,7503121,7503385,7503586,7508251,7508944,7509532,7511215,7511406,7511811,7512158,7512477,7512774,7513021	7484857,7496073,7496346,7496613,7497045,7497517,7497870,7498210,7499163,7499491,7500848,7501108,7501383,7501729,7502122,7502701,7503292,7503490,7503791,7508475,7509190,7509632,7511319,7511588,7512014,7512344,7512590,7512923,7514616	Gene ID= ENSG00000181222.15 TPM= 67.14 Transcript Type= processed_transcript
chr17	7548891	7557890	7548891	7557890	+	ENST00000293825.10@TNFSF12	ENST00000293825.10	protein_coding	7548891,7549474,7550120,7550799,7550943,7556778,7557099	7549312,7549521,7550195,7550852,7550978,7556902,7557890	Gene ID= ENSG00000239697.10 TPM= 103.92 Transcript Type= protein_coding
chr17	7549058	7557890	7549058	7557890	+	ENST00000322272.11@TNFSF12	ENST00000322272.11	protein_coding	7549058,7549474,7550120,7550799,7550943,7553587,7556778,7557099	7549312,7549521,7550195,7550852,7550978,7553825,7556902,7557890	Gene ID= ENSG00000239697.10 TPM= 23.35 Transcript Type= nonsense_mediated_decay
chr17	7558281	7561601	7558281	7561601	+	transcript1293.chr17.nic@TNFSF13	transcript1293.chr17.nic	protein_coding	7558281,7559068,7559624,7559846,7560049,7560350,7560724	7558375,7559297,7559702,7559893,7560167,7560488,7561601	Gene ID= ENSG00000161955.16 TPM= 14.71 Transcript Type= NA
chr17	7558787	7561601	7558787	7561601	+	ENST00000396545.4@TNFSF13	ENST00000396545.4	protein_coding	7558787,7559624,7559846,7560049,7560350,7560724,7560999	7559297,7559702,7559893,7560167,7560488,7560817,7561601	Gene ID= ENSG00000161955.16 TPM= 11.68 Transcript Type= protein_coding
chr17	7555974	7561601	7555974	7561601	+	transcript1301.chr17.nnic@TNFSF13	transcript1301.chr17.nnic	protein_coding	7555974,7558898,7559624,7559846,7560049,7560350,7560724	7558798,7559297,7559702,7559893,7560167,7560488,7561601	Gene ID= ENSG00000161955.16 TPM= 54.02 Transcript Type= NA
chr17	7558292	7561608	7558292	7561608	+	ENST00000380535.8@TNFSF13	ENST00000380535.8	protein_coding	7558292,7559848,7560049,7560350,7560724	7559297,7559893,7560167,7560488,7561608	Gene ID= ENSG00000161955.16 TPM= 11.59 Transcript Type= protein_coding
chr17	7561875	7571969	7561875	7571969	+	ENST00000321337.11@SENP3	ENST00000321337.11	protein_coding	7561875,7563066,7564625,7564959,7565440,7565717,7566927,7570356,7570681,7570883,7571373	7562263,7563791,7564864,7565070,7565587,7565764,7567004,7570493,7570764,7570933,7571969	Gene ID= ENSG00000161956.12 TPM= 50.21 Transcript Type= protein_coding
chr17	7563287	7578715	7563287	7578715	+	ENST00000614237.1@SENP3-EIF4A1	ENST00000614237.1	protein_coding	7563287,7564625,7564959,7565440,7565717,7566927,7570356,7570681,7570883,7571373,7572284,7574260,7574546,7575119,7576524,7577056,7577344,7577569,7577827,7578165,7578342	7563791,7564864,7565070,7565587,7565764,7567004,7570493,7570764,7570933,7571479,7572864,7574308,7574678,7575258,7576692,7577165,7577487,7577706,7577916,7578244,7578715	Gene ID= ENSG00000277957.1 TPM= 314.08 Transcript Type= nonsense_mediated_decay
chr17	7572826	7579005	7572826	7579005	+	ENST00000293831.12@EIF4A1	ENST00000293831.12	protein_coding	7572826,7574260,7574546,7575119,7576524,7577056,7577344,7577569,7577827,7578165,7578342	7572864,7574308,7574678,7575258,7576692,7577165,7577487,7577706,7577916,7578244,7579005	Gene ID= ENSG00000161960.14 TPM= 252.59 Transcript Type= protein_coding
chr17	7572837	7578641	7572837	7578641	+	ENST00000577269.5@EIF4A1	ENST00000577269.5	protein_coding	7572837,7574260,7574546,7575119,7576524,7577056,7577344,7577569,7577827,7578227,7578342	7572864,7574308,7574678,7575258,7576692,7577165,7577487,7577706,7577916,7578244,7578641	Gene ID= ENSG00000161960.14 TPM= 1.55 Transcript Type= protein_coding
chr17	7574103	7578625	7574103	7578625	+	transcript1343.chr17.nnic@NA	transcript1343.chr17.nnic	NA	7574103	7578625	Gene ID= novel_gene_chr17_1344 TPM= 3.5 Transcript Type= NA
chr17	7579467	7582113	7579467	7582113	+	ENST00000250092.10@CD68	ENST00000250092.10	protein_coding	7579467,7579810,7580466,7580711,7580896,7581378	7579726,7580327,7580585,7580783,7581066,7582113	Gene ID= ENSG00000129226.13 TPM= 1010.05 Transcript Type= protein_coding
chr17	7579491	7582111	7579491	7582111	+	ENST00000380498.10@CD68	ENST00000380498.10	protein_coding	7579491,7579891,7580466,7580711,7580896,7581378	7579726,7580327,7580585,7580783,7581066,7582111	Gene ID= ENSG00000129226.13 TPM= 114.31 Transcript Type= protein_coding
chr17	7583850	7588192	7583850	7588192	+	transcript1321.chr17.nic@MPDU1	transcript1321.chr17.nic	protein_coding	7583850,7585732,7585946,7586692,7587161,7587426	7583965,7585797,7586078,7586777,7587271,7588192	Gene ID= ENSG00000129255.15 TPM= 7.01 Transcript Type= NA
chr17	7583852	7588177	7583852	7588177	+	ENST00000577088.5@MPDU1	ENST00000577088.5	protein_coding	7583852,7585732,7585946,7586692,7587426	7583965,7585797,7586078,7587271,7588177	Gene ID= ENSG00000129255.15 TPM= 4.09 Transcript Type= retained_intron
chr17	7583852	7588176	7583852	7588176	+	ENST00000572836.5@MPDU1	ENST00000572836.5	protein_coding	7583852,7585732,7585946,7586692,7586899,7587426	7583965,7585797,7586078,7586777,7587271,7588176	Gene ID= ENSG00000129255.15 TPM= 4.09 Transcript Type= retained_intron
chr17	7591230	7614882	7591230	7614882	-	transcript1347.chr17.nic@FXR2	transcript1347.chr17.nic	protein_coding	7614452,7606097,7605645,7604009,7603757,7602909,7601409,7595824,7594679,7594238,7593918,7593403,7592984,7592694,7592504,7592254,7592071,7591230	7614882,7606149,7605738,7604080,7603905,7603002,7601525,7595994,7594757,7594347,7594004,7593625,7593181,7592894,7592599,7592354,7592157,7591925	Gene ID= ENSG00000129245.11 TPM= 3.5 Transcript Type= NA
chr17	7591230	7614897	7591230	7614897	-	transcript1352.chr17.nic@FXR2	transcript1352.chr17.nic	protein_coding	7614452,7606097,7605645,7604009,7603757,7602909,7601409,7595824,7594679,7594238,7593918,7593403,7592984,7592694,7592504,7592254,7591230	7614897,7606149,7605738,7604080,7603905,7603002,7601525,7595994,7594757,7594347,7594004,7593625,7593181,7592894,7592599,7592354,7592157	Gene ID= ENSG00000129245.11 TPM= 3.5 Transcript Type= NA
chr17	7591230	7615039	7591230	7615039	-	transcript1355.chr17.nic@FXR2	transcript1355.chr17.nic	protein_coding	7614452,7606097,7605645,7604009,7603757,7602909,7601409,7595824,7594679,7594238,7593918,7593403,7592984,7592504,7592254,7591230	7615039,7606149,7605738,7604080,7603905,7603002,7601525,7595994,7594757,7594347,7594004,7593625,7593181,7592894,7592354,7591925	Gene ID= ENSG00000129245.11 TPM= 3.5 Transcript Type= NA
chr17	7591230	7614867	7591230	7614867	-	ENST00000250113.11@FXR2	ENST00000250113.11	protein_coding	7614452,7606097,7605645,7604009,7603757,7602909,7601409,7595824,7594679,7594238,7593918,7593403,7592984,7592694,7592504,7592254,7591230	7614867,7606149,7605738,7604080,7603905,7603002,7601525,7595994,7594757,7594347,7594004,7593625,7593181,7592894,7592599,7592354,7591925	Gene ID= ENSG00000129245.11 TPM= 110.92 Transcript Type= protein_coding
chr17	7626238	7627866	7626238	7627866	-	transcript1374.chr17.nic@SAT2	transcript1374.chr17.nic	protein_coding	7627363,7627143,7626943,7626753,7626238	7627866,7627226,7627044,7626793,7626614	Gene ID= ENSG00000141504.11 TPM= 3.5 Transcript Type= NA
chr17	7626238	7627874	7626238	7627874	-	transcript1378.chr17.nic@SAT2	transcript1378.chr17.nic	protein_coding	7627553,7627363,7627143,7626753,7626238	7627874,7627414,7627226,7627044,7626614	Gene ID= ENSG00000141504.11 TPM= 2.34 Transcript Type= NA
chr17	7626234	7627796	7626234	7627796	-	ENST00000576846.1@SAT2	ENST00000576846.1	protein_coding	7626234	7627796	Gene ID= ENSG00000141504.11 TPM= 3.5 Transcript Type= retained_intron
chr17	7626234	7627855	7626234	7627855	-	ENST00000269298.9@SAT2	ENST00000269298.9	protein_coding	7627570,7627363,7627143,7626943,7626753,7626234	7627855,7627414,7627226,7627044,7626793,7626614	Gene ID= ENSG00000141504.11 TPM= 7.01 Transcript Type= protein_coding
chr17	7687600	7703501	7687600	7703501	+	ENST00000498311.5@WRAP53	ENST00000498311.5	protein_coding	7687600,7688648,7689224,7689590,7700741,7701427,7701657,7702344,7702743,7702993,7703243	7688561,7689079,7689322,7689701,7700829,7701549,7701789,7702552,7702846,7703127,7703501	Gene ID= ENSG00000141499.16 TPM= 1.75 Transcript Type= nonsense_mediated_decay
chr17	7686301	7703502	7686301	7703502	+	ENST00000316024.9@WRAP53	ENST00000316024.9	protein_coding	7686301,7689224,7689590,7700741,7701459,7701657,7702344,7702743,7702993,7703243	7689079,7689322,7689701,7700829,7701549,7701789,7702552,7702846,7703127,7703502	Gene ID= ENSG00000141499.16 TPM= 4.09 Transcript Type= protein_coding
chr17	7688321	7703502	7688321	7703502	+	ENST00000396463.6@WRAP53	ENST00000396463.6	protein_coding	7688321,7688648,7689224,7689590,7700741,7701459,7701657,7702344,7702743,7702993,7703243	7688561,7689079,7689322,7689701,7700829,7701549,7701789,7702552,7702846,7703127,7703502	Gene ID= ENSG00000141499.16 TPM= 3.5 Transcript Type= protein_coding
chr17	7705202	7711378	7705202	7711378	+	ENST00000226091.2@EFNB3	ENST00000226091.2	protein_coding	7705202,7707958,7708435,7708635,7709167	7705720,7708250,7708527,7708739,7711378	Gene ID= ENSG00000108947.4 TPM= 1.17 Transcript Type= protein_coding
chr17	7839962	7853680	7839962	7853680	+	ENST00000448097.6@KDM6B	ENST00000448097.6	protein_coding	7839962,7844901,7845314,7845550,7845872,7846078,7846400,7846579,7846819,7847105,7847546,7849821,7850072,7851021,7851330,7851478,7851648,7851951,7852149,7852495,7853000,7853210,7853498	7840024,7845020,7845456,7845691,7845970,7846297,7846492,7846740,7847016,7847452,7849728,7849947,7850177,7851226,7851394,7851549,7851796,7852065,7852336,7852636,7853126,7853380,7853680	Gene ID= ENSG00000132510.10 TPM= 4.47 Transcript Type= protein_coding
chr17	7848756	7854432	7848756	7854432	+	transcript1386.chr17.nic@KDM6B	transcript1386.chr17.nic	protein_coding	7848756,7849821,7850072,7851021,7851330,7851478,7851648,7851951,7852149,7852495,7853000,7853210,7853498	7849728,7849947,7850177,7851226,7851394,7851549,7851796,7852065,7852336,7852636,7853126,7853380,7854432	Gene ID= ENSG00000132510.10 TPM= 7.39 Transcript Type= NA
chr17	7839904	7854796	7839904	7854796	+	ENST00000254846.9@KDM6B	ENST00000254846.9	protein_coding	7839904,7844901,7845314,7845550,7845872,7846078,7846400,7846579,7846819,7847105,7847546,7849821,7850072,7851021,7851330,7851478,7851648,7851951,7852149,7852495,7853000,7853210	7840024,7845020,7845456,7845691,7845970,7846297,7846492,7846740,7847016,7847452,7849728,7849947,7850177,7851226,7851394,7851549,7851796,7852065,7852336,7852636,7853126,7854796	Gene ID= ENSG00000132510.10 TPM= 14.98 Transcript Type= protein_coding
chr17	7855066	7856061	7855066	7856061	+	ENST00000574668.1@TMEM88	ENST00000574668.1	protein_coding	7855066,7855771	7855284,7856061	Gene ID= ENSG00000167874.6 TPM= 3.5 Transcript Type= protein_coding
chr17	7855065	7856099	7855065	7856099	+	ENST00000301599.6@TMEM88	ENST00000301599.6	protein_coding	7855065,7855445	7855284,7856099	Gene ID= ENSG00000167874.6 TPM= 8.17 Transcript Type= protein_coding
chr17	7856685	7857891	7856685	7857891	-	ENST00000575771.5@NAA38	ENST00000575771.5	protein_coding	7857383,7857015,7856685	7857891,7857198,7856843	Gene ID= ENSG00000183011.13 TPM= 14.01 Transcript Type= protein_coding
chr17	7856699	7857263	7856699	7857263	-	ENST00000576384.1@NAA38	ENST00000576384.1	protein_coding	7856985,7856699	7857263,7856843	Gene ID= ENSG00000183011.13 TPM= 4.67 Transcript Type= protein_coding
chr17	7856685	7857562	7856685	7857562	-	ENST00000575071.5@NAA38	ENST00000575071.5	protein_coding	7857383,7856985,7856685	7857562,7857198,7856843	Gene ID= ENSG00000183011.13 TPM= 2.34 Transcript Type= protein_coding
chr17	7857983	7862282	7857983	7862282	+	ENST00000332439.4@CYB5D1	ENST00000332439.4	protein_coding	7857983,7858403,7858606,7859382	7858294,7858479,7858824,7862282	Gene ID= ENSG00000182224.11 TPM= 5.84 Transcript Type= protein_coding
chr17	7913339	7916289	7913339	7916289	-	transcript1411.chr17.nnic@AC104581.1	transcript1411.chr17.nnic	protein_coding	7916184,7913339	7916289,7915577	Gene ID= ENSG00000179859.9 TPM= 7.59 Transcript Type= NA
chr17	7913340	7915957	7913340	7915957	-	ENST00000635932.1@AC104581.1	ENST00000635932.1	protein_coding	7913340	7915957	Gene ID= ENSG00000179859.9 TPM= 1.75 Transcript Type= protein_coding
chr17	7922184	7929183	7922184	7929183	-	transcript1415.chr17.nic@KCNAB3	transcript1415.chr17.nic	protein_coding	7927783,7927657,7927344,7926059,7925931,7925683,7925097,7924415,7924145,7923968,7923711,7923456,7922184	7929183,7927694,7927423,7926103,7925975,7925726,7925183,7924500,7924265,7924062,7923831,7923544,7923179	Gene ID= ENSG00000170049.9 TPM= 3.5 Transcript Type= NA
chr17	7930349	7931945	7930349	7931945	-	ENST00000303731.8@TRAPPC1	ENST00000303731.8	protein_coding	7931731,7931506,7931011,7930349	7931945,7931576,7931149,7930734	Gene ID= ENSG00000170043.11 TPM= 27.44 Transcript Type= protein_coding
chr17	7930345	7931999	7930345	7931999	-	ENST00000540486.5@TRAPPC1	ENST00000540486.5	protein_coding	7931940,7931731,7931506,7931011,7930345	7931999,7931829,7931576,7931149,7930734	Gene ID= ENSG00000170043.11 TPM= 8.76 Transcript Type= protein_coding
chr17	7932269	7949578	7932269	7949578	+	transcript1421.chr17.nic@CNTROB	transcript1421.chr17.nic	protein_coding	7932269,7932928,7934138,7934465,7934989,7936366,7936701,7937164,7939513,7940096,7943391,7944123,7944476,7945728,7947571,7947916,7948157,7948487,7949085,7949385	7932800,7933349,7934222,7934546,7935145,7936482,7936817,7937262,7939749,7940242,7943524,7944248,7944638,7945986,7947722,7947979,7948327,7948619,7949157,7949578	Gene ID= ENSG00000170037.13 TPM= 2.63 Transcript Type= NA
chr17	7932218	7949578	7932218	7949578	+	transcript1428.chr17.nic@CNTROB	transcript1428.chr17.nic	protein_coding	7932218,7934138,7934465,7934989,7936366,7936701,7937164,7939513,7940096,7943391,7944123,7945728,7947571,7947916,7948157,7948487,7949082,7949385	7933349,7934222,7934546,7935145,7936482,7936817,7937262,7939749,7940242,7943524,7944638,7945986,7947722,7947979,7948327,7948619,7949157,7949578	Gene ID= ENSG00000170037.13 TPM= 3.41 Transcript Type= NA
chr17	7932155	7949578	7932155	7949578	+	ENST00000563694.5@CNTROB	ENST00000563694.5	protein_coding	7932155,7934138,7934465,7934989,7936366,7936701,7937164,7939513,7940096,7943391,7944123,7944476,7945728,7947571,7947916,7948157,7948487,7949085,7949385	7933349,7934222,7934546,7935145,7936482,7936817,7937262,7939749,7940242,7943524,7944248,7944638,7945986,7947722,7947979,7948327,7948619,7949157,7949578	Gene ID= ENSG00000170037.13 TPM= 54.78 Transcript Type= protein_coding
chr17	7932155	7949576	7932155	7949576	+	ENST00000380262.7@CNTROB	ENST00000380262.7	protein_coding	7932155,7934138,7934465,7934989,7936366,7936701,7937164,7939513,7940096,7943391,7944123,7944476,7945728,7947571,7947916,7948157,7948487,7949085,7949385	7933349,7934222,7934546,7935145,7936482,7936817,7937262,7939749,7940242,7943524,7944248,7944638,7945986,7947722,7947979,7948327,7948685,7949157,7949576	Gene ID= ENSG00000170037.13 TPM= 2.24 Transcript Type= protein_coding
chr17	8016076	8020341	8016076	8020341	+	transcript1451.chr17.nnic@GUCY2D	transcript1451.chr17.nnic	protein_coding	8016076,8016443,8017028	8016290,8016554,8020341	Gene ID= ENSG00000132518.6 TPM= 3.5 Transcript Type= NA
chr17	8039011	8044441	8039011	8044441	+	transcript1449.chr17.nic@ALOX15B	transcript1449.chr17.nic	protein_coding	8039011,8039386,8039902,8042369	8039302,8039605,8039983,8044441	Gene ID= ENSG00000179593.15 TPM= 4.67 Transcript Type= NA
chr17	8039011	8040634	8039011	8040634	+	transcript1452.chr17.nic@ALOX15B	transcript1452.chr17.nic	protein_coding	8039011,8039386,8039902	8039302,8039605,8040634	Gene ID= ENSG00000179593.15 TPM= 3.5 Transcript Type= NA
chr17	8039017	8049134	8039017	8049134	+	ENST00000380183.8@ALOX15B	ENST00000380183.8	protein_coding	8039017,8039386,8039902,8042369,8042781,8044829,8045238,8045483,8046668,8046907,8047258,8047564,8047745,8048386	8039302,8039605,8039983,8042491,8042884,8045001,8045384,8045686,8046754,8047076,8047379,8047664,8047915,8049134	Gene ID= ENSG00000179593.15 TPM= 71.22 Transcript Type= protein_coding
chr17	8039040	8049110	8039040	8049110	+	ENST00000380173.6@ALOX15B	ENST00000380173.6	protein_coding	8039040,8039386,8039902,8042369,8042781,8044829,8045238,8045483,8046907,8047258,8047564,8047745,8048386	8039302,8039605,8039983,8042491,8042884,8045001,8045384,8045686,8047076,8047379,8047664,8047915,8049110	Gene ID= ENSG00000179593.15 TPM= 12.84 Transcript Type= protein_coding
chr17	8039725	8041305	8039725	8041305	+	transcript1458.chr17.nnic@NA	transcript1458.chr17.nnic	NA	8039725	8041305	Gene ID= novel_gene_chr17_1459 TPM= 2.34 Transcript Type= NA
chr17	8046588	8049127	8046588	8049127	+	transcript1460.chr17.nnic@NA	transcript1460.chr17.nnic	NA	8046588	8049127	Gene ID= novel_gene_chr17_1461 TPM= 5.84 Transcript Type= NA
chr17	8056884	8058782	8056884	8058782	+	transcript1462.chr17.nnic@NA	transcript1462.chr17.nnic	NA	8056884	8058782	Gene ID= novel_gene_chr17_1463 TPM= 23.35 Transcript Type= NA
chr17	8056886	8062252	8056886	8062252	+	transcript1464.chr17.nnic@NA	transcript1464.chr17.nnic	NA	8056886	8062252	Gene ID= novel_gene_chr17_1465 TPM= 8.17 Transcript Type= NA
chr17	8140470	8143582	8140470	8143582	-	transcript1490.chr17.nnic@NA	transcript1490.chr17.nnic	NA	8140470	8143582	Gene ID= novel_gene_chr17_1491 TPM= 53.71 Transcript Type= NA
chr17	8145325	8156360	8145325	8156360	-	transcript1471.chr17.nic@PER1	transcript1471.chr17.nic	protein_coding	8156307,8150432,8150219,8149971,8149755,8149462,8149259,8148644,8148181,8147997,8147674,8147470,8147250,8146897,8146594,8146372,8145325	8156360,8150845,8150317,8150125,8149876,8149663,8149310,8148786,8148259,8148103,8147827,8147578,8147381,8147002,8146765,8146502,8146137	Gene ID= ENSG00000179094.15 TPM= 12.84 Transcript Type= NA
chr17	8140472	8152435	8140472	8152435	-	ENST00000317276.8@PER1	ENST00000317276.8	protein_coding	8152337,8150432,8150219,8149971,8149755,8149462,8149259,8148644,8148181,8147997,8147674,8147470,8147250,8146897,8146594,8146372,8145958,8144751,8143266,8142649,8142269,8141805,8140472	8152435,8150845,8150317,8150125,8149876,8149663,8149310,8148786,8148259,8148103,8147827,8147578,8147381,8147002,8146765,8146502,8146137,8144993,8143876,8142835,8142458,8141955,8141340	Gene ID= ENSG00000179094.15 TPM= 172.8 Transcript Type= protein_coding
chr17	8146539	8149187	8146539	8149187	+	transcript1486.chr17.nnic@NA	transcript1486.chr17.nnic	NA	8146539	8149187	Gene ID= novel_gene_chr17_1487 TPM= 10.51 Transcript Type= NA
chr17	8152026	8153998	8152026	8153998	+	transcript1484.chr17.nnic@NA	transcript1484.chr17.nnic	NA	8152026	8153998	Gene ID= novel_gene_chr17_1485 TPM= 10.51 Transcript Type= NA
chr17	8153439	8156329	8153439	8156329	-	transcript1488.chr17.nnic@NA	transcript1488.chr17.nnic	NA	8153439	8156329	Gene ID= novel_gene_chr17_1489 TPM= 4.67 Transcript Type= NA
chr17	8159149	8162975	8159149	8162975	-	ENST00000316509.10@VAMP2	ENST00000316509.10	protein_coding	8162878,8162249,8161608,8161473,8159149	8162975,8162369,8161766,8161524,8160871	Gene ID= ENSG00000220205.8 TPM= 18.68 Transcript Type= protein_coding
chr17	8173237	8176373	8173237	8176373	-	ENST00000449985.6@TMEM107	ENST00000449985.6	protein_coding	8176200,8173237	8176373,8174272	Gene ID= ENSG00000179029.14 TPM= 1.17 Transcript Type= protein_coding
chr17	8173967	8176374	8173967	8176374	-	ENST00000437139.6@TMEM107	ENST00000437139.6	protein_coding	8176200,8175959,8175757,8174520,8173967	8176374,8176026,8175857,8174616,8174272	Gene ID= ENSG00000179029.14 TPM= 2.34 Transcript Type= protein_coding
chr17	8188333	8190907	8188333	8190907	-	ENST00000389017.5@BORCS6	ENST00000389017.5	protein_coding	8188333	8190907	Gene ID= ENSG00000196544.7 TPM= 39.7 Transcript Type= protein_coding
chr17	8220642	8224043	8220642	8224043	-	ENST00000315707.3@LINC00324	ENST00000315707.3	lincRNA	8223812,8222293,8220642	8224043,8223274,8221509	Gene ID= ENSG00000178977.3 TPM= 1.17 Transcript Type= lincRNA
chr17	8227820	8248059	8227820	8248059	-	transcript1511.chr17.nnic@CTC1	transcript1511.chr17.nnic	protein_coding	8248004,8242985,8238392,8237375,8236058,8235831,8235053,8234749,8234455,8232361,8231903,8231726,8231276,8230563,8230294,8229891,8229302,8229142,8228727,8228503,8227820	8248059,8243148,8238629,8237519,8236342,8235959,8235285,8234926,8234655,8233456,8232227,8231815,8231469,8230651,8230468,8229968,8229446,8229206,8228892,8228629,8228319	Gene ID= ENSG00000178971.13 TPM= 3.5 Transcript Type= NA
chr17	8224821	8248044	8224821	8248044	-	ENST00000315684.12@CTC1	ENST00000315684.12	protein_coding	8248004,8242985,8238392,8238031,8237375,8236058,8235831,8235053,8234749,8234455,8232906,8232361,8231903,8231726,8231276,8230563,8230294,8229891,8229302,8229142,8228727,8228503,8224821	8248044,8243148,8238629,8238242,8237519,8236342,8235959,8235285,8234926,8234655,8233032,8232475,8232227,8231815,8231469,8230651,8230468,8229968,8229446,8229206,8228892,8228629,8228319	Gene ID= ENSG00000178971.13 TPM= 8.17 Transcript Type= protein_coding
chr17	8249286	8270485	8249286	8270485	+	ENST00000314666.10@PFAS	ENST00000314666.10	protein_coding	8249286,8253859,8254166,8255027,8255502,8255805,8256267,8256524,8256835,8257807,8258071,8262920,8263109,8263575,8263775,8264212,8264470,8264895,8265288,8265556,8265862,8266234,8266753,8267028,8267372,8267551,8268533,8268954	8249339,8254079,8254301,8255132,8255691,8255910,8256407,8256648,8256963,8257938,8258199,8262993,8263265,8263636,8263936,8264337,8264601,8265125,8265468,8265639,8266017,8266353,8266898,8267235,8267463,8267665,8268856,8270485	Gene ID= ENSG00000178921.13 TPM= 24.52 Transcript Type= protein_coding
chr17	8290059	8295400	8290059	8295400	-	transcript1531.chr17.nnic@SLC25A35	transcript1531.chr17.nnic	protein_coding	8294433,8292523,8290842,8290059	8295400,8292588,8290976,8290678	Gene ID= ENSG00000125434.10 TPM= 2.92 Transcript Type= NA
chr17	8290059	8295318	8290059	8295318	-	ENST00000577745.1@SLC25A35	ENST00000577745.1	protein_coding	8294433,8292523,8291333,8290842,8290059	8295318,8292588,8291485,8290976,8290678	Gene ID= ENSG00000125434.10 TPM= 2.92 Transcript Type= protein_coding
chr17	8288497	8290092	8288497	8290092	+	ENST00000226105.10@RANGRF	ENST00000226105.10	protein_coding	8288497,8288956,8289258,8289503,8289813	8288865,8289072,8289414,8289588,8290092	Gene ID= ENSG00000108961.13 TPM= 21.4 Transcript Type= protein_coding
chr17	8288654	8290090	8288654	8290090	+	ENST00000407006.8@RANGRF	ENST00000407006.8	protein_coding	8288654,8288956,8289258,8289503	8288865,8289072,8289414,8290090	Gene ID= ENSG00000108961.13 TPM= 34.25 Transcript Type= protein_coding
chr17	8288678	8290092	8288678	8290092	+	ENST00000439238.3@RANGRF	ENST00000439238.3	protein_coding	8288678,8288956,8289258	8288865,8289072,8290092	Gene ID= ENSG00000108961.13 TPM= 2.34 Transcript Type= protein_coding
chr17	8288671	8290092	8288671	8290092	+	ENST00000580434.5@RANGRF	ENST00000580434.5	protein_coding	8288671,8288956,8289258,8289813	8288865,8289072,8289414,8290092	Gene ID= ENSG00000108961.13 TPM= 1.55 Transcript Type= protein_coding
chr17	8310822	8322514	8310822	8322514	+	ENST00000421050.2@ARHGEF15	ENST00000421050.2	protein_coding	8310822,8311991,8312922,8313501,8314906,8315066,8315414,8315755,8316019,8318387,8318570,8318750,8319007,8319312,8319499,8320842	8310863,8312640,8313254,8313555,8314964,8315277,8315574,8315907,8316148,8318461,8318662,8318910,8319159,8319394,8319603,8322514	Gene ID= ENSG00000198844.10 TPM= 43.2 Transcript Type= protein_coding
chr17	8310283	8322516	8310283	8322516	+	ENST00000361926.7@ARHGEF15	ENST00000361926.7	protein_coding	8310283,8311991,8312922,8313501,8314906,8315066,8315414,8315755,8316019,8318387,8318570,8318750,8319007,8319312,8319499,8320842	8310343,8312640,8313254,8313555,8314964,8315277,8315574,8315907,8316148,8318461,8318662,8318910,8319159,8319394,8319603,8322516	Gene ID= ENSG00000198844.10 TPM= 17.51 Transcript Type= protein_coding
chr17	8368637	8376711	8368637	8376711	-	ENST00000396267.1@KRBA2	ENST00000396267.1	protein_coding	8375900,8368637	8376711,8370386	Gene ID= ENSG00000184619.3 TPM= 1.17 Transcript Type= protein_coding
chr17	8377521	8383167	8377521	8383167	-	ENST00000584164.5@RPL26	ENST00000584164.5	protein_coding	8382781,8382143,8379796,8377521	8383167,8382315,8379936,8377692	Gene ID= ENSG00000161970.12 TPM= 17.51 Transcript Type= protein_coding
chr17	8377520	8383193	8377520	8383193	-	ENST00000293842.9@RPL26	ENST00000293842.9	protein_coding	8383157,8382143,8379796,8377520	8383193,8382315,8379936,8377692	Gene ID= ENSG00000161970.12 TPM= 389.98 Transcript Type= protein_coding
chr17	8377549	8383166	8377549	8383166	-	ENST00000582556.5@RPL26	ENST00000582556.5	protein_coding	8382862,8382143,8379796,8377549	8383166,8382315,8379936,8377692	Gene ID= ENSG00000161970.12 TPM= 2.34 Transcript Type= protein_coding
chr17	8442778	8467344	8442778	8467344	+	transcript1562.chr17.nic@NDEL1	transcript1562.chr17.nic	protein_coding	8442778,8445711,8446754,8448550,8450780,8454796,8460009,8466930	8444357,8445864,8446902,8448686,8450953,8454887,8460160,8467344	Gene ID= ENSG00000166579.15 TPM= 2.34 Transcript Type= NA
chr17	8435861	8468160	8435861	8468160	+	ENST00000334527.11@NDEL1	ENST00000334527.11	protein_coding	8435861,8444260,8445711,8446754,8448550,8450780,8454796,8460009,8466930	8436045,8444357,8445864,8446902,8448686,8450953,8454887,8460160,8468160	Gene ID= ENSG00000166579.15 TPM= 38.53 Transcript Type= protein_coding
chr17	8469863	8473791	8469863	8473791	-	transcript1584.chr17.nnic@NA	transcript1584.chr17.nnic	NA	8469863	8473791	Gene ID= novel_gene_chr17_1585 TPM= 10.51 Transcript Type= NA
chr17	8474212	8630724	8474212	8630724	-	transcript1564.chr17.nic@MYH10	transcript1564.chr17.nic	protein_coding	8630654,8623424,8622902,8604826,8589081,8577236,8569720,8553955,8552046,8548644,8548313,8546544,8545448,8542107,8535758,8535387,8521092,8520878,8518881,8518631,8513786,8513538,8512451,8509812,8508554,8506318,8504694,8500826,8499270,8495137,8493733,8492776,8492297,8490340,8487433,8484138,8481322,8480402,8480110,8478338,8476876,8474212	8630724,8623497,8623277,8604982,8589108,8577338,8569812,8554018,8552144,8548787,8548408,8546662,8545600,8542280,8535931,8535501,8521285,8520999,8518950,8518791,8513894,8513669,8512657,8509949,8508677,8506489,8504906,8500970,8499476,8495241,8493885,8493024,8492509,8490552,8487594,8484266,8481410,8480525,8480318,8478446,8477048,8475948	Gene ID= ENSG00000133026.12 TPM= 7.97 Transcript Type= NA
chr17	8512468	8630727	8512468	8630727	-	transcript1579.chr17.nic@MYH10	transcript1579.chr17.nic	protein_coding	8630654,8622902,8604826,8589081,8577236,8569720,8553955,8552046,8548644,8548313,8546544,8545448,8542107,8535758,8535387,8521092,8520878,8518881,8518631,8513786,8513538,8512468	8630727,8623277,8604982,8589108,8577338,8569812,8554018,8552144,8548787,8548408,8546662,8545600,8542280,8535931,8535501,8521285,8520999,8518950,8518791,8513894,8513669,8512657	Gene ID= ENSG00000133026.12 TPM= 4.67 Transcript Type= NA
chr17	8474212	8630761	8474212	8630761	-	ENST00000269243.8@MYH10	ENST00000269243.8	protein_coding	8630654,8622902,8604826,8589081,8577236,8569720,8553955,8552046,8548644,8548313,8546544,8545448,8542107,8535758,8535387,8521092,8520878,8518881,8518631,8513786,8513538,8512451,8509812,8508554,8506318,8504694,8500826,8499270,8495137,8493733,8492776,8492297,8490340,8487433,8484138,8481322,8480402,8480110,8478338,8476876,8474212	8630761,8623277,8604982,8589108,8577338,8569812,8554018,8552144,8548787,8548408,8546662,8545600,8542280,8535931,8535501,8521285,8520999,8518950,8518791,8513894,8513669,8512657,8509949,8508677,8506489,8504906,8500970,8499476,8495241,8493885,8493024,8492509,8490552,8487594,8484266,8481410,8480525,8480318,8478446,8477048,8475948	Gene ID= ENSG00000133026.12 TPM= 54.09 Transcript Type= protein_coding
chr17	8797162	8799349	8797162	8799349	-	ENST00000329805.5@MFSD6L	ENST00000329805.5	protein_coding	8797162	8799349	Gene ID= ENSG00000185156.5 TPM= 1.17 Transcript Type= protein_coding
chr17	8802737	8867677	8802737	8867677	-	ENST00000619866.4@PIK3R6	ENST00000619866.4	protein_coding	8867529,8849782,8839614,8838564,8837803,8836791,8836547,8835273,8832889,8829706,8828567,8828112,8827172,8823387,8822996,8822587,8821846,8819083,8804041,8802737	8867677,8849885,8839697,8838655,8837871,8836923,8836616,8835456,8833045,8829792,8828990,8828190,8827294,8823497,8823086,8822657,8821936,8819198,8804153,8803429	Gene ID= ENSG00000276231.4 TPM= 1.17 Transcript Type= protein_coding
chr17	8878917	8965712	8878917	8965712	-	ENST00000447110.5@PIK3R5	ENST00000447110.5	protein_coding	8965596,8911392,8909074,8905669,8904777,8893586,8890738,8889973,8889139,8888171,8887521,8887096,8886477,8886229,8884707,8881788,8881630,8880905,8878917	8965712,8911507,8909174,8905737,8904915,8893655,8890912,8890126,8889222,8888891,8887683,8887221,8886605,8886322,8884783,8881881,8881712,8881017,8880786	Gene ID= ENSG00000141506.13 TPM= 65.39 Transcript Type= protein_coding
chr17	8963528	8965715	8963528	8965715	-	transcript1599.chr17.nnic@NA	transcript1599.chr17.nnic	NA	8963528	8965715	Gene ID= novel_gene_chr17_1600 TPM= 8.17 Transcript Type= NA
chr17	9243876	9245184	9243876	9245184	-	transcript1602.chr17.nnic@NA	transcript1602.chr17.nnic	NA	9243876	9245184	Gene ID= novel_gene_chr17_1603 TPM= 8.17 Transcript Type= NA
chr17	9250471	9576236	9250471	9576236	-	ENST00000306357.8@STX8	ENST00000306357.8	protein_coding	9575792,9568371,9557434,9545172,9505038,9491829,9378552,9250471	9576236,9568470,9557528,9545282,9505162,9491921,9378653,9250645	Gene ID= ENSG00000170310.14 TPM= 24.52 Transcript Type= protein_coding
chr17	9645537	9729691	9645537	9729691	+	ENST00000285199.11@USP43	ENST00000285199.11	protein_coding	9645537,9656403,9666648,9674891,9676746,9680231,9682823,9686798,9693127,9700172,9701119,9701352,9709956,9711968,9727954	9646136,9656534,9666751,9674983,9676881,9680366,9682958,9686909,9693230,9700249,9701245,9701700,9710114,9712132,9729691	Gene ID= ENSG00000154914.16 TPM= 8.17 Transcript Type= protein_coding
chr17	9825551	9892102	9825551	9892102	+	ENST00000262441.9@GLP2R	ENST00000262441.9	protein_coding	9825551,9833807,9836371,9842495,9854495,9857423,9859942,9861139,9862021,9870747,9880378,9887932,9889370	9826252,9833894,9836475,9842616,9854601,9857576,9860101,9861199,9862090,9870835,9880516,9887973,9892102	Gene ID= ENSG00000065325.12 TPM= 3.5 Transcript Type= protein_coding
chr17	9896320	9905621	9896320	9905621	-	ENST00000226193.5@RCVRN	ENST00000226193.5	protein_coding	9904800,9900989,9896320	9905621,9901100,9898204	Gene ID= ENSG00000109047.7 TPM= 1.17 Transcript Type= protein_coding
chr17	9910671	9916463	9910671	9916463	-	transcript1630.chr17.nnic@NA	transcript1630.chr17.nnic	NA	9910671	9916463	Gene ID= novel_gene_chr17_1631 TPM= 9.34 Transcript Type= NA
chr17	10672474	10697568	10672474	10697568	-	ENST00000255390.9@SCO1	ENST00000255390.9	protein_coding	10697235,10695741,10692764,10691872,10686727,10672474	10697568,10695831,10692961,10691964,10686842,10681253	Gene ID= ENSG00000133028.10 TPM= 3.5 Transcript Type= protein_coding
chr17	10697594	10711233	10697594	10711233	+	ENST00000379774.4@ADPRM	ENST00000379774.4	protein_coding	10697594,10704910,10706438,10710834	10697667,10705527,10706554,10711233	Gene ID= ENSG00000170222.11 TPM= 2.34 Transcript Type= protein_coding
chr17	10710069	10730005	10710069	10730005	-	transcript1639.chr17.nnic@TMEM220	transcript1639.chr17.nnic	protein_coding	10729780,10729031,10726204,10725011,10723270,10713126,10710069	10730005,10729060,10726264,10725134,10723329,10713267,10712390	Gene ID= ENSG00000187824.8 TPM= 2.34 Transcript Type= NA
chr17	10713295	10730316	10713295	10730316	-	ENST00000341871.7@TMEM220	ENST00000341871.7	protein_coding	10729780,10729031,10726204,10725011,10723270,10713295	10730316,10729060,10726264,10725134,10723329,10715588	Gene ID= ENSG00000187824.8 TPM= 2.34 Transcript Type= protein_coding
chr17	10705835	10708448	10705835	10708448	+	transcript1648.chr17.nnic@NA	transcript1648.chr17.nnic	NA	10705835	10708448	Gene ID= novel_gene_chr17_1649 TPM= 2.34 Transcript Type= NA
chr17	11598470	11612833	11598470	11612833	+	ENST00000579828.5@DNAH9	ENST00000579828.5	protein_coding	11598470,11608129,11610396,11611650	11598915,11608325,11610554,11612833	Gene ID= ENSG00000007174.17 TPM= 1.17 Transcript Type= protein_coding
chr17	11977445	11997372	11977445	11997372	-	ENST00000322748.7@ZNF18	ENST00000322748.7	protein_coding	11997273,11996810,11995558,11992443,11990974,11990462,11984113,11983297,11977445	11997372,11997110,11995679,11992911,11991163,11990550,11984197,11983407,11978744	Gene ID= ENSG00000154957.13 TPM= 1.17 Transcript Type= protein_coding
chr17	11977439	11997510	11977439	11997510	-	ENST00000580306.6@ZNF18	ENST00000580306.6	protein_coding	11997431,11992443,11990974,11990462,11984113,11983297,11977439	11997510,11992911,11991163,11990550,11984197,11983407,11978744	Gene ID= ENSG00000154957.13 TPM= 8.17 Transcript Type= protein_coding
chr17	12020824	12143823	12020824	12143823	+	ENST00000353533.9@MAP2K4	ENST00000353533.9	protein_coding	12020824,12054889,12081356,12095575,12107790,12110375,12113233,12125294,12129139,12139839,12141147	12021001,12054991,12081530,12095694,12107909,12110426,12113360,12125371,12129287,12139884,12143823	Gene ID= ENSG00000065559.14 TPM= 7.01 Transcript Type= protein_coding
chr17	12789463	12991642	12789463	12991642	+	transcript1680.chr17.nic@ARHGAP44	transcript1680.chr17.nic	protein_coding	12789463,12894940,12896407,12908897,12915900,12919755,12928929,12941056,12943588,12944069,12949140,12949649,12952501,12955867,12956655,12958717,12974089,12980058,12984531,12987101,12990032	12789891,12894979,12896511,12908973,12916011,12919831,12929046,12941124,12943669,12944196,12949251,12949730,12952581,12955980,12956746,12958897,12974310,12980233,12984908,12987152,12991642	Gene ID= ENSG00000006740.16 TPM= 13.43 Transcript Type= NA
chr17	12789463	12991643	12789463	12991643	+	transcript1683.chr17.nnic@ARHGAP44	transcript1683.chr17.nnic	protein_coding	12789463,12894940,12896407,12908897,12915900,12919755,12928929,12941056,12943588,12944069,12949140,12949649,12952501,12955867,12956655,12958717,12974089,12980058,12990032	12789891,12894979,12896511,12908973,12916011,12919831,12929046,12941124,12943669,12944196,12949251,12949730,12952581,12955980,12956746,12958897,12974310,12980233,12991643	Gene ID= ENSG00000006740.16 TPM= 3.5 Transcript Type= NA
chr17	12789463	12991643	12789463	12991643	+	transcript1685.chr17.nnic@ARHGAP44	transcript1685.chr17.nnic	protein_coding	12789463,12894940,12896407,12908897,12915900,12919755,12928929,12941056,12943588,12944069,12949140,12949649,12952501,12955867,12956655,12958717,12974089,12990032	12789891,12894979,12896511,12908973,12916011,12919831,12929046,12941124,12943669,12944196,12949251,12949730,12952581,12955980,12956746,12958897,12974310,12991643	Gene ID= ENSG00000006740.16 TPM= 3.5 Transcript Type= NA
chr17	12789539	12991643	12789539	12991643	+	ENST00000340825.7@ARHGAP44	ENST00000340825.7	protein_coding	12789539,12894940,12896407,12908897,12915900,12919755,12928929,12941056,12943588,12944069,12949140,12949649,12952501,12955867,12956655,12958717,12974089,12980058,12984531,12990032	12789891,12894979,12896511,12908973,12916011,12919831,12929046,12941124,12943669,12944196,12949251,12949730,12952581,12955980,12956746,12958897,12974310,12980233,12984908,12991643	Gene ID= ENSG00000006740.16 TPM= 30.94 Transcript Type= protein_coding
chr17	12992391	13017680	12992391	13017680	-	transcript1669.chr17.nic@ELAC2	transcript1669.chr17.nic	protein_coding	13017567,13017071,13016862,13015768,13014439,13013207,13011663,13010613,13005921,13005753,13004989,13003479,13002441,13002274,13000156,12998412,12996547,12995940,12995703,12994963,12994764,12994425,12993687,12992391	13017680,13017121,13016932,13015832,13014496,13013275,13011782,13010671,13005979,13005825,13005101,13003574,13002579,13002359,13000274,12998508,12996685,12995978,12995812,12995062,12994884,12994503,12993831,12993045	Gene ID= ENSG00000006744.18 TPM= 12.26 Transcript Type= NA
chr17	12992391	13018187	12992391	13018187	-	ENST00000338034.8@ELAC2	ENST00000338034.8	protein_coding	13017703,13017071,13016862,13015768,13014439,13013207,13011663,13010613,13005921,13005753,13004989,13003479,13002441,13002274,13000156,12998412,12996547,12995940,12995703,12994963,12994764,12994425,12993687,12992391	13018187,13017121,13016932,13015832,13014496,13013275,13011782,13010671,13005979,13005825,13005101,13003574,13002579,13002359,13000274,12998508,12996685,12995978,12995812,12995062,12994884,12994503,12993831,12993045	Gene ID= ENSG00000006744.18 TPM= 115.01 Transcript Type= protein_coding
chr17	12992391	13018038	12992391	13018038	-	transcript1677.chr17.nic@ELAC2	transcript1677.chr17.nic	protein_coding	13017703,13017071,13016862,13015768,13014439,13013207,13011663,13010613,13005921,13005753,13004989,13003479,13002441,13002274,13000156,12998412,12996547,12995940,12995703,12994764,12994425,12993687,12992391	13018038,13017121,13016932,13015832,13014496,13013275,13011782,13010671,13005979,13005825,13005101,13003574,13002579,13002359,13000274,12998508,12996685,12995978,12995812,12995062,12994503,12993831,12993045	Gene ID= ENSG00000006744.18 TPM= 4.67 Transcript Type= NA
chr17	14069496	14077322	14069496	14077322	+	ENST00000429152.6@COX10	ENST00000429152.6	protein_coding	14069496,14074323,14076735	14069648,14074456,14077322	Gene ID= ENSG00000006695.10 TPM= 1.17 Transcript Type= protein_coding
chr17	14069529	14208677	14069529	14208677	+	ENST00000261643.7@COX10	ENST00000261643.7	protein_coding	14069529,14074323,14076735,14102118,14159877,14191989,14206810	14069648,14074456,14077056,14102242,14159947,14192221,14208677	Gene ID= ENSG00000006695.10 TPM= 28.02 Transcript Type= protein_coding
chr17	15229778	15262551	15229778	15262551	-	transcript1708.chr17.nnic@PMP22	transcript1708.chr17.nnic	protein_coding	15262429,15260650,15259094,15239471,15229778	15262551,15260983,15259193,15239611,15231080	Gene ID= ENSG00000109099.13 TPM= 44.75 Transcript Type= NA
chr17	15229778	15262589	15229778	15262589	-	ENST00000395938.6@PMP22	ENST00000395938.6	protein_coding	15262429,15260650,15259094,15239471,15229778	15262589,15260761,15259193,15239611,15231080	Gene ID= ENSG00000109099.13 TPM= 211.72 Transcript Type= protein_coding
chr17	15229778	15265307	15229778	15265307	-	ENST00000312280.7@PMP22	ENST00000312280.7	protein_coding	15265154,15260650,15259094,15239471,15229778	15265307,15260761,15259193,15239611,15231080	Gene ID= ENSG00000109099.13 TPM= 40.08 Transcript Type= protein_coding
chr17	15229783	15233704	15229783	15233704	-	transcript1716.chr17.nnic@NA	transcript1716.chr17.nnic	NA	15229783	15233704	Gene ID= novel_gene_chr17_1717 TPM= 2.34 Transcript Type= NA
chr17	15243981	15247085	15243981	15247085	+	transcript1714.chr17.nnic@NA	transcript1714.chr17.nnic	NA	15243981	15247085	Gene ID= novel_gene_chr17_1715 TPM= 4.67 Transcript Type= NA
chr17	15436021	15563610	15436021	15563610	-	transcript1719.chr17.nnic@TVP23C-CDRT4	transcript1719.chr17.nnic	protein_coding	15563437,15555282,15553685,15547059,15545785,15540433,15440208,15436021	15563610,15555364,15553829,15547148,15545916,15540561,15440285,15438200	Gene ID= ENSG00000259024.6 TPM= 3.5 Transcript Type= NA
chr17	15627967	15651881	15627967	15651881	-	transcript1729.chr17.nic@AC005324.3	transcript1729.chr17.nic	protein_coding	15651091,15642721,15636036,15632509,15631619,15627967	15651881,15642816,15636269,15632674,15631714,15629198	Gene ID= ENSG00000251537.4 TPM= 46.12 Transcript Type= NA
chr17	15627960	15642964	15627960	15642964	-	ENST00000577886.5@TRIM16	ENST00000577886.5	protein_coding	15642721,15636036,15632509,15631619,15627960	15642964,15636269,15632674,15631714,15629198	Gene ID= ENSG00000221926.11 TPM= 6.42 Transcript Type= protein_coding
chr17	15786176	15789703	15786176	15789703	+	transcript1738.chr17.nnic@NA	transcript1738.chr17.nnic	NA	15786176	15789703	Gene ID= novel_gene_chr17_1739 TPM= 24.52 Transcript Type= NA
chr17	15944917	15975746	15944917	15975746	+	ENST00000304222.2@ADORA2B	ENST00000304222.2	protein_coding	15944917,15974679	15945583,15975746	Gene ID= ENSG00000170425.3 TPM= 8.17 Transcript Type= protein_coding
chr17	15976560	15999717	15976560	15999717	-	transcript1779.chr17.nic@ZSWIM7	transcript1779.chr17.nic	protein_coding	15999519,15993757,15987266,15981040,15978044,15977800,15977579,15976560	15999717,15993778,15987368,15981144,15978163,15977913,15977700,15977092	Gene ID= ENSG00000214941.7 TPM= 2.72 Transcript Type= NA
chr17	15976560	15999717	15976560	15999717	-	transcript1793.chr17.nic@ZSWIM7	transcript1793.chr17.nic	protein_coding	15999519,15993757,15987266,15981040,15978044,15976560	15999717,15993778,15987368,15981144,15978163,15977092	Gene ID= ENSG00000214941.7 TPM= 6.22 Transcript Type= NA
chr17	15977727	15999717	15977727	15999717	-	ENST00000491631.5@ZSWIM7	ENST00000491631.5	protein_coding	15999506,15993757,15987266,15981040,15977727	15999717,15993778,15987368,15981144,15978163	Gene ID= ENSG00000214941.7 TPM= 9.34 Transcript Type= nonsense_mediated_decay
chr17	15976560	15999692	15976560	15999692	-	ENST00000399277.5@ZSWIM7	ENST00000399277.5	protein_coding	15999519,15993757,15987266,15981040,15976560	15999692,15993778,15987368,15981144,15978163	Gene ID= ENSG00000214941.7 TPM= 4.09 Transcript Type= protein_coding
chr17	15976560	15999694	15976560	15999694	-	ENST00000399280.6@ZSWIM7	ENST00000399280.6	protein_coding	15999660,15993757,15987266,15981040,15976560	15999694,15993778,15987368,15981144,15978163	Gene ID= ENSG00000214941.7 TPM= 1.75 Transcript Type= processed_transcript
chr17	15976560	15999650	15976560	15999650	-	ENST00000490395.5@ZSWIM7	ENST00000490395.5	protein_coding	15999506,15993757,15987266,15981040,15978044,15977800,15977579,15976560	15999650,15993778,15987368,15981144,15978163,15977913,15977700,15977092	Gene ID= ENSG00000214941.7 TPM= 1.55 Transcript Type= nonsense_mediated_decay
chr17	15977727	15999684	15977727	15999684	-	ENST00000472495.5@ZSWIM7	ENST00000472495.5	protein_coding	15999519,15993757,15987266,15981040,15978044,15977727	15999684,15993778,15987368,15981144,15978163,15977913	Gene ID= ENSG00000214941.7 TPM= 1.75 Transcript Type= protein_coding
chr17	15977730	15999683	15977730	15999683	-	ENST00000495825.6@ZSWIM7	ENST00000495825.6	protein_coding	15999660,15993757,15987266,15981040,15978044,15977730	15999683,15993778,15987368,15981144,15978163,15977913	Gene ID= ENSG00000214941.7 TPM= 1.75 Transcript Type= processed_transcript
chr17	15999380	16028912	15999380	16028912	+	ENST00000261647.9@TTC19	ENST00000261647.9	protein_coding	15999380,16000118,16001915,16002793,16003831,16004201,16006474,16025017,16026540,16027374	16000032,16000245,16002025,16002831,16003887,16004262,16006568,16025171,16026702,16028912	Gene ID= ENSG00000011295.15 TPM= 40.87 Transcript Type= protein_coding
chr17	15999822	16047065	15999822	16047065	+	transcript1767.chr17.nic@TTC19	transcript1767.chr17.nic	protein_coding	15999822,16000118,16001915,16002793,16003831,16004201,16006474,16025017,16026540,16044503	16000032,16000245,16002025,16002831,16003887,16004262,16006568,16025171,16026702,16047065	Gene ID= ENSG00000011295.15 TPM= 2.34 Transcript Type= NA
chr17	15999824	16028786	15999824	16028786	+	transcript1774.chr17.nic@TTC19	transcript1774.chr17.nic	protein_coding	15999824,16001915,16002793,16003831,16004201,16006474,16025017,16026540,16027374	16000245,16002025,16002831,16003887,16004262,16006568,16025171,16026702,16028786	Gene ID= ENSG00000011295.15 TPM= 3.5 Transcript Type= NA
chr17	15999802	16028786	15999802	16028786	+	ENST00000475723.5@TTC19	ENST00000475723.5	protein_coding	15999802,16000118,16001915,16002793,16003831,16004201,16006474,16025017,16026540,16027374	16000032,16000382,16002025,16002831,16003887,16004262,16006568,16025171,16026702,16028786	Gene ID= ENSG00000011295.15 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr17	16126107	16215553	16126107	16215553	-	transcript1748.chr17.nic@NCOR1	transcript1748.chr17.nic	protein_coding	16215362,16198601,16194462,16186554,16171803,16164979,16158760,16153339,16151946,16151590,16149451,16146376,16143606,16139008,16138158,16137311,16126107	16215553,16198719,16194639,16186687,16171995,16165161,16158873,16153395,16151998,16151616,16149517,16146548,16143696,16139186,16138212,16137412,16126209	Gene ID= ENSG00000141027.20 TPM= 17.51 Transcript Type= NA
chr17	16126132	16215553	16126132	16215553	-	transcript1751.chr17.nnic@NCOR1	transcript1751.chr17.nnic	protein_coding	16215362,16198098,16194462,16186554,16171803,16164979,16158760,16153339,16151946,16151590,16149451,16146376,16143606,16139008,16138158,16137311,16126132	16215553,16198719,16194639,16186687,16171995,16165161,16158873,16153395,16151998,16151616,16149517,16146548,16143696,16139186,16138212,16137412,16126206	Gene ID= ENSG00000141027.20 TPM= 10.51 Transcript Type= NA
chr17	16126132	16215583	16126132	16215583	-	transcript1755.chr17.nic@NCOR1	transcript1755.chr17.nic	protein_coding	16215362,16194462,16186554,16171803,16164979,16158760,16153339,16151946,16151590,16149451,16146376,16143606,16139008,16138158,16137311,16126132	16215583,16194639,16186687,16171995,16165161,16158873,16153395,16151998,16151616,16149517,16146548,16143696,16139186,16138212,16137412,16126206	Gene ID= ENSG00000141027.20 TPM= 7.01 Transcript Type= NA
chr17	16029157	16215549	16029157	16215549	-	ENST00000268712.7@NCOR1	ENST00000268712.7	protein_coding	16215362,16194462,16186554,16171803,16164979,16158760,16153339,16151946,16149451,16146376,16143606,16139008,16138158,16137311,16126082,16121052,16119423,16117888,16108786,16101250,16098367,16091863,16086282,16080607,16080408,16079964,16075534,16073429,16072145,16071409,16070165,16067894,16065485,16064870,16064068,16062105,16061401,16058471,16057907,16057514,16048845,16046951,16040441,16039433,16034765,16029157	16215549,16194639,16186687,16171995,16165161,16158873,16153395,16151998,16149517,16146548,16143696,16139186,16138212,16137412,16126206,16121269,16119485,16118027,16108912,16101757,16098496,16092058,16086442,16080727,16080509,16080064,16075702,16073569,16072228,16071665,16070525,16068121,16065694,16065019,16064187,16062270,16061894,16058599,16058064,16057737,16048988,16047093,16040494,16039654,16034944,16032483	Gene ID= ENSG00000141027.20 TPM= 19.85 Transcript Type= protein_coding
chr17	16126132	16215530	16126132	16215530	-	ENST00000436828.5@NCOR1	ENST00000436828.5	protein_coding	16215362,16198601,16194462,16186554,16171803,16164979,16158760,16153339,16151946,16151590,16149451,16146376,16143606,16139008,16138158,16137311,16126132	16215530,16198719,16194639,16186687,16171995,16165161,16158873,16153395,16151998,16151616,16149517,16146548,16143696,16139186,16138212,16137412,16126206	Gene ID= ENSG00000141027.20 TPM= 53.71 Transcript Type= protein_coding
chr17	16126082	16215537	16126082	16215537	-	ENST00000411510.5@NCOR1	ENST00000411510.5	protein_coding	16215362,16194462,16186554,16171803,16164979,16158760,16153339,16151946,16149451,16146376,16143606,16139008,16138158,16137311,16126082	16215537,16194639,16186687,16171995,16165161,16158873,16153395,16151998,16149517,16146548,16143696,16139186,16138212,16137412,16126209	Gene ID= ENSG00000141027.20 TPM= 10.51 Transcript Type= protein_coding
chr17	16126107	16215529	16126107	16215529	-	ENST00000582357.5@NCOR1	ENST00000582357.5	protein_coding	16215362,16194462,16186554,16171803,16164979,16158760,16153339,16151946,16151590,16149451,16146376,16143606,16139008,16138158,16137311,16126107	16215529,16194639,16186687,16171995,16165161,16158873,16153395,16151998,16151616,16149517,16146548,16143696,16139186,16138212,16137412,16126209	Gene ID= ENSG00000141027.20 TPM= 31.53 Transcript Type= protein_coding
chr17	16126132	16215530	16126132	16215530	-	ENST00000460276.5@NCOR1	ENST00000460276.5	protein_coding	16215362,16194462,16186554,16171803,16164979,16158760,16153339,16151946,16149451,16146376,16143606,16139008,16138158,16137311,16126132	16215530,16194639,16186687,16172020,16165161,16158873,16153395,16151998,16149517,16146548,16143696,16139186,16138212,16137412,16126206	Gene ID= ENSG00000141027.20 TPM= 10.51 Transcript Type= nonsense_mediated_decay
chr17	16169212	16175385	16169212	16175385	+	transcript1810.chr17.nnic@NA	transcript1810.chr17.nnic	NA	16169212	16175385	Gene ID= novel_gene_chr17_1811 TPM= 4.67 Transcript Type= NA
chr17	16217246	16218219	16217246	16218219	+	ENST00000463810.2@PIGL	ENST00000463810.2	protein_coding	16217246,16217548	16217461,16218219	Gene ID= ENSG00000108474.16 TPM= 2.34 Transcript Type= protein_coding
chr17	16342534	16353499	16342534	16353499	-	ENST00000299736.4@CENPV	ENST00000299736.4	protein_coding	16353027,16349931,16348616,16344597,16342534	16353499,16350029,16348685,16344711,16342941	Gene ID= ENSG00000166582.9 TPM= 10.51 Transcript Type= protein_coding
chr17	16342534	16353456	16342534	16353456	-	ENST00000476243.5@CENPV	ENST00000476243.5	protein_coding	16353027,16349931,16348616,16344597,16342534	16353456,16350029,16349333,16344711,16342941	Gene ID= ENSG00000166582.9 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr17	16380799	16382740	16380799	16382740	+	ENST00000302182.7@UBB	ENST00000302182.7	protein_coding	16380799,16381902	16381184,16382740	Gene ID= ENSG00000170315.13 TPM= 461.2 Transcript Type= protein_coding
chr17	16415542	16437003	16415542	16437003	+	ENST00000338560.11@TRPV2	ENST00000338560.11	protein_coding	16415542,16417562,16420115,16422599,16423469,16426099,16426722,16427449,16428317,16428817,16431784,16431966,16433574,16434890,16436789	16415833,16417868,16420248,16422889,16423767,16426269,16426877,16427547,16428387,16428982,16431850,16432300,16433698,16434969,16437003	Gene ID= ENSG00000187688.14 TPM= 177.28 Transcript Type= protein_coding
chr17	16415542	16437003	16415542	16437003	+	transcript1826.chr17.nic@TRPV2	transcript1826.chr17.nic	protein_coding	16415542,16417562,16420115,16422599,16423469,16426099,16426722,16427449,16428317,16428817,16431784,16431966,16434890,16436789	16415833,16417868,16420248,16422889,16423767,16426269,16426877,16427547,16428387,16428982,16431850,16432300,16434969,16437003	Gene ID= ENSG00000187688.14 TPM= 30.16 Transcript Type= NA
chr17	16415542	16437003	16415542	16437003	+	transcript1833.chr17.nnic@TRPV2	transcript1833.chr17.nnic	protein_coding	16415542,16417562,16420115,16422599,16423469,16426099,16426722,16427449,16428317,16428817,16433574,16434890,16436789	16415833,16417868,16420248,16422889,16423767,16426269,16426877,16427547,16428387,16428982,16433698,16434969,16437003	Gene ID= ENSG00000187688.14 TPM= 13.23 Transcript Type= NA
chr17	16422306	16425398	16422306	16425398	-	transcript1840.chr17.nnic@NA	transcript1840.chr17.nnic	NA	16422306	16425398	Gene ID= novel_gene_chr17_1841 TPM= 2.34 Transcript Type= NA
chr17	16432807	16435723	16432807	16435723	-	transcript1842.chr17.nnic@NA	transcript1842.chr17.nnic	NA	16432807	16435723	Gene ID= novel_gene_chr17_1843 TPM= 2.34 Transcript Type= NA
chr17	16438977	16442012	16438977	16442012	+	transcript1846.chr17.nic@LRRC75A-AS1	transcript1846.chr17.nic	processed_transcript	16438977,16439327,16439528,16440185,16441074,16441368	16439060,16439414,16439703,16440253,16441130,16442012	Gene ID= ENSG00000175061.17 TPM= 29.89 Transcript Type= NA
chr17	16438977	16442012	16438977	16442012	+	transcript1848.chr17.nic@LRRC75A-AS1	transcript1848.chr17.nic	processed_transcript	16438977,16439327,16439581,16440185,16441074,16441368	16439060,16439414,16439703,16440253,16441130,16442012	Gene ID= ENSG00000175061.17 TPM= 25.22 Transcript Type= NA
chr17	16439020	16442012	16439020	16442012	+	ENST00000582911.5@LRRC75A-AS1	ENST00000582911.5	processed_transcript	16439020,16439327,16440185,16441074,16441368	16439060,16439393,16440253,16441130,16442012	Gene ID= ENSG00000175061.17 TPM= 191.02 Transcript Type= antisense_RNA
chr17	16438987	16442028	16438987	16442028	+	ENST00000481898.5@LRRC75A-AS1	ENST00000481898.5	processed_transcript	16438987,16439327,16439660,16440185,16441074,16441368	16439060,16439414,16439703,16440253,16441130,16442028	Gene ID= ENSG00000175061.17 TPM= 12.61 Transcript Type= antisense_RNA
chr17	16439059	16441999	16439059	16441999	+	ENST00000470491.6@LRRC75A-AS1	ENST00000470491.6	processed_transcript	16439059,16440185,16441368	16439414,16440253,16441999	Gene ID= ENSG00000175061.17 TPM= 7.41 Transcript Type= antisense_RNA
chr17	16439011	16441995	16439011	16441995	+	ENST00000497774.5@LRRC75A-AS1	ENST00000497774.5	processed_transcript	16439011,16439327,16441074,16441368	16439060,16440253,16441130,16441995	Gene ID= ENSG00000175061.17 TPM= 2.34 Transcript Type= retained_intron
chr17	16439327	16442023	16439327	16442023	+	ENST00000483140.5@LRRC75A-AS1	ENST00000483140.5	processed_transcript	16439327,16439581,16440185,16441368	16439414,16439703,16440253,16442023	Gene ID= ENSG00000175061.17 TPM= 2.1 Transcript Type= antisense_RNA
chr17	16439321	16441987	16439321	16441987	+	ENST00000481027.5@LRRC75A-AS1	ENST00000481027.5	processed_transcript	16439321,16439528,16440185,16441074,16441368	16439414,16439703,16440253,16441130,16441987	Gene ID= ENSG00000175061.17 TPM= 3.76 Transcript Type= antisense_RNA
chr17	16440804	16442135	16440804	16442135	-	transcript1861.chr17.nnic@NA	transcript1861.chr17.nnic	NA	16440804	16442135	Gene ID= novel_gene_chr17_1862 TPM= 2.86 Transcript Type= NA
chr17	16551387	16569206	16551387	16569206	-	ENST00000395825.3@ZNF287	ENST00000395825.3	protein_coding	16568952,16567329,16566525,16563699,16563146,16551387	16569206,16567929,16566622,16563825,16563232,16553426	Gene ID= ENSG00000141040.14 TPM= 2.34 Transcript Type= protein_coding
chr17	16620737	16653847	16620737	16653847	-	transcript1868.chr17.nic@ZNF624	transcript1868.chr17.nic	protein_coding	16653568,16649658,16647329,16634630,16633862,16620737	16653847,16649746,16647394,16634756,16633957,16624509	Gene ID= ENSG00000197566.9 TPM= 2.34 Transcript Type= NA
chr17	16620737	16653853	16620737	16653853	-	ENST00000311331.11@ZNF624	ENST00000311331.11	protein_coding	16653764,16649658,16647329,16634630,16633862,16620737	16653853,16649746,16647394,16634756,16633957,16624509	Gene ID= ENSG00000197566.9 TPM= 3.5 Transcript Type= protein_coding
chr17	16829843	16832834	16829843	16832834	-	transcript1873.chr17.nnic@KRT16P2	transcript1873.chr17.nnic	transcribed_unprocessed_pseudogene	16832221,16831702,16831408,16831133,16830885,16830395,16830254,16829843	16832834,16831784,16831564,16831293,16831043,16830615,16830300,16830093	Gene ID= ENSG00000227300.12 TPM= 2.34 Transcript Type= NA
chr17	17042436	17185560	17042436	17185560	+	transcript1880.chr17.nic@MPRIP	transcript1880.chr17.nic	protein_coding	17042436,17075710,17078011,17126702,17131617,17136219,17137916,17142627,17143556,17146036,17147319,17150144,17154306,17158432,17161240,17171718,17172698,17173916,17175293,17176426,17177250,17180003,17180607,17184823	17042971,17075787,17078076,17126853,17131701,17136450,17138429,17142765,17143669,17146092,17147387,17150233,17154415,17159002,17161356,17171865,17172815,17174075,17175412,17176512,17177412,17180088,17180669,17185560	Gene ID= ENSG00000133030.20 TPM= 104.07 Transcript Type= NA
chr17	17042436	17185560	17042436	17185560	+	transcript1883.chr17.nic@MPRIP	transcript1883.chr17.nic	protein_coding	17042436,17075710,17078011,17126702,17131617,17136219,17137916,17142627,17143556,17146036,17147319,17150144,17154306,17158432,17161240,17171718,17172698,17173916,17176426,17177250,17180003,17180607,17184823	17042971,17075787,17078076,17126853,17131701,17136450,17138075,17142765,17143669,17146092,17147387,17150233,17154415,17159002,17161356,17171865,17172815,17174075,17176512,17177412,17180088,17180669,17185560	Gene ID= ENSG00000133030.20 TPM= 20.4 Transcript Type= NA
chr17	17042436	17185560	17042436	17185560	+	transcript1886.chr17.nic@MPRIP	transcript1886.chr17.nic	protein_coding	17042436,17075710,17078011,17126702,17131617,17136219,17137916,17142627,17143556,17146036,17147319,17150144,17154306,17158432,17161240,17171718,17172698,17173916,17175293,17176426,17177250,17180003,17184823	17042971,17075787,17078076,17126853,17131701,17136450,17138429,17142765,17143669,17146092,17147387,17150233,17154415,17159002,17161356,17171865,17172815,17174075,17175412,17176512,17177412,17180088,17185560	Gene ID= ENSG00000133030.20 TPM= 26.24 Transcript Type= NA
chr17	17042436	17185560	17042436	17185560	+	transcript1887.chr17.nic@MPRIP	transcript1887.chr17.nic	protein_coding	17042436,17075710,17078011,17126702,17131617,17136219,17137916,17142627,17143556,17146036,17147319,17150144,17154306,17158432,17161240,17171718,17172698,17173916,17176426,17177250,17180003,17180607,17184823	17042971,17075787,17078076,17126853,17131701,17136450,17138429,17142765,17143669,17146092,17147387,17150233,17154415,17159002,17161356,17171865,17172815,17174075,17176512,17177412,17180088,17180669,17185560	Gene ID= ENSG00000133030.20 TPM= 14.16 Transcript Type= NA
chr17	17042760	17097337	17042760	17097337	+	ENST00000395807.2@MPRIP	ENST00000395807.2	protein_coding	17042760,17075710,17078011,17096768	17042971,17075787,17078076,17097337	Gene ID= ENSG00000133030.20 TPM= 1.17 Transcript Type= processed_transcript
chr17	17180947	17185555	17180947	17185555	+	transcript1900.chr17.nnic@NA	transcript1900.chr17.nnic	NA	17180947	17185555	Gene ID= novel_gene_chr17_1901 TPM= 5.6 Transcript Type= NA
chr17	17185212	17189511	17185212	17189511	+	transcript1898.chr17.nnic@NA	transcript1898.chr17.nnic	NA	17185212	17189511	Gene ID= novel_gene_chr17_1899 TPM= 5.84 Transcript Type= NA
chr17	17200995	17206315	17200995	17206315	-	ENST00000321560.3@PLD6	ENST00000321560.3	protein_coding	17205860,17200995	17206315,17203098	Gene ID= ENSG00000179598.5 TPM= 10.51 Transcript Type= protein_coding
chr17	17212212	17237179	17212212	17237179	-	transcript1907.chr17.nnic@FLCN	transcript1907.chr17.nnic	protein_coding	17236912,17236476,17232788,17231794,17227889,17226176,17223922,17222501,17221537,17219019,17217069,17216380,17215185,17214985,17212212	17237179,17236683,17232901,17231882,17228161,17226322,17224143,17222661,17221628,17219209,17217182,17216503,17215316,17215090,17213856	Gene ID= ENSG00000154803.12 TPM= 4.67 Transcript Type= NA
chr17	17212212	17237187	17212212	17237187	-	transcript1915.chr17.nnic@FLCN	transcript1915.chr17.nnic	protein_coding	17236912,17232788,17231794,17227889,17226176,17222501,17221537,17219019,17217069,17216380,17215185,17214985,17212212	17237187,17232901,17231882,17228161,17226322,17222661,17221628,17219209,17217182,17216503,17215316,17215090,17213856	Gene ID= ENSG00000154803.12 TPM= 4.67 Transcript Type= NA
chr17	17212212	17237139	17212212	17237139	-	ENST00000285071.8@FLCN	ENST00000285071.8	protein_coding	17236912,17232788,17231794,17227889,17226176,17223922,17222501,17221537,17219019,17217069,17216380,17215185,17214985,17212212	17237139,17232901,17231882,17228161,17226322,17224143,17222661,17221628,17219209,17217182,17216503,17215316,17215090,17213856	Gene ID= ENSG00000154803.12 TPM= 82.9 Transcript Type= protein_coding
chr17	17221171	17237139	17221171	17237139	-	ENST00000389169.9@FLCN	ENST00000389169.9	protein_coding	17236912,17232788,17231794,17227889,17226176,17223922,17222501,17221171	17237139,17232901,17231882,17228161,17226322,17224143,17222661,17221628	Gene ID= ENSG00000154803.12 TPM= 7.01 Transcript Type= protein_coding
chr17	17246835	17281299	17246835	17281299	-	transcript1922.chr17.nic@COPS3	transcript1922.chr17.nic	protein_coding	17281132,17276035,17270896,17270758,17267885,17264802,17261966,17260301,17254859,17248926,17247480,17246835	17281299,17276183,17271008,17270807,17267977,17264981,17262106,17260474,17254945,17249039,17247560,17247151	Gene ID= ENSG00000141030.12 TPM= 8.17 Transcript Type= NA
chr17	17246835	17281302	17246835	17281302	-	transcript1923.chr17.nic@COPS3	transcript1923.chr17.nic	protein_coding	17281132,17276035,17270896,17270758,17267885,17264802,17261966,17260301,17254859,17248926,17247480,17246835	17281302,17276164,17271008,17270807,17268045,17264981,17262106,17260474,17254945,17249039,17247560,17247151	Gene ID= ENSG00000141030.12 TPM= 2.34 Transcript Type= NA
chr17	17246835	17281297	17246835	17281297	-	transcript1929.chr17.nic@COPS3	transcript1929.chr17.nic	protein_coding	17281132,17270896,17270758,17267885,17264802,17261966,17260301,17254859,17248926,17247480,17246835	17281297,17271008,17270807,17267977,17264981,17262106,17260474,17254945,17249039,17247560,17247151	Gene ID= ENSG00000141030.12 TPM= 3.5 Transcript Type= NA
chr17	17246835	17281302	17246835	17281302	-	transcript1930.chr17.nic@COPS3	transcript1930.chr17.nic	protein_coding	17281132,17276035,17270896,17270758,17267885,17264802,17260301,17254859,17248926,17247480,17246835	17281302,17276164,17271008,17270807,17267977,17264981,17262106,17254945,17249039,17247560,17247151	Gene ID= ENSG00000141030.12 TPM= 2.34 Transcript Type= NA
chr17	17246837	17281191	17246837	17281191	-	ENST00000578317.5@COPS3	ENST00000578317.5	protein_coding	17281132,17276035,17270896,17270758,17267885,17264802,17261966,17260301,17254859,17248926,17247480,17246837	17281191,17276183,17271008,17270807,17268045,17264981,17262106,17260474,17254945,17249039,17247560,17247151	Gene ID= ENSG00000141030.12 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr17	17246836	17281293	17246836	17281293	-	ENST00000268717.9@COPS3	ENST00000268717.9	protein_coding	17281132,17276035,17270896,17270758,17267885,17264802,17261966,17260301,17254859,17248926,17247480,17246836	17281293,17276164,17271008,17270807,17267977,17264981,17262106,17260474,17254945,17249039,17247560,17247151	Gene ID= ENSG00000141030.12 TPM= 72.39 Transcript Type= protein_coding
chr17	17303335	17347661	17303335	17347661	+	ENST00000389022.8@NT5M	ENST00000389022.8	protein_coding	17303335,17306543,17323185,17344794,17346805	17303817,17306643,17323245,17344908,17347661	Gene ID= ENSG00000205309.13 TPM= 1.17 Transcript Type= protein_coding
chr17	17303335	17347661	17303335	17347661	+	ENST00000616989.1@NT5M	ENST00000616989.1	protein_coding	17303335,17306543,17323185,17344794,17346805	17303817,17306643,17323245,17344926,17347661	Gene ID= ENSG00000205309.13 TPM= 2.34 Transcript Type= protein_coding
chr17	17383377	17384012	17383377	17384012	-	ENST00000392730.2@AC073621.1	ENST00000392730.2	processed_pseudogene	17383377	17384012	Gene ID= ENSG00000215030.5 TPM= 91.07 Transcript Type= processed_pseudogene
chr17	17476986	17493226	17476986	17493226	+	ENST00000268711.3@MED9	ENST00000268711.3	protein_coding	17476986,17491279	17477265,17493226	Gene ID= ENSG00000141026.5 TPM= 49.04 Transcript Type= protein_coding
chr17	17494437	17496393	17494437	17496393	-	ENST00000225688.3@RASD1	ENST00000225688.3	protein_coding	17495896,17494437	17496393,17495684	Gene ID= ENSG00000108551.4 TPM= 169.3 Transcript Type= protein_coding
chr17	17505563	17591700	17505563	17591700	-	ENST00000255389.9@PEMT	ENST00000255389.9	protein_coding	17591531,17576920,17522280,17512509,17509434,17506227,17505563	17591700,17577027,17522395,17512654,17509545,17506301,17505848	Gene ID= ENSG00000133027.17 TPM= 35.03 Transcript Type= protein_coding
chr17	17505565	17591708	17505565	17591708	-	ENST00000395781.6@PEMT	ENST00000395781.6	protein_coding	17591531,17576920,17522280,17512509,17509434,17507169,17506227,17505565	17591708,17577027,17522395,17512654,17509545,17507199,17506301,17505848	Gene ID= ENSG00000133027.17 TPM= 1.17 Transcript Type= protein_coding
chr17	17681317	17685049	17681317	17685049	+	transcript1980.chr17.nnic@RAI1	transcript1980.chr17.nnic	protein_coding	17681317,17683546,17684065	17681793,17683703,17685049	Gene ID= ENSG00000108557.18 TPM= 5.84 Transcript Type= NA
chr17	17681399	17754676	17681399	17754676	+	transcript1981.chr17.nnic@RAI1	transcript1981.chr17.nnic	protein_coding	17681399,17724028,17754229	17681793,17724159,17754676	Gene ID= ENSG00000108557.18 TPM= 2.34 Transcript Type= NA
chr17	17681473	17811453	17681473	17811453	+	ENST00000353383.5@RAI1	ENST00000353383.5	protein_coding	17681473,17724028,17792933,17803756,17809390,17809970	17681793,17724159,17798513,17803849,17809439,17811453	Gene ID= ENSG00000108557.18 TPM= 81.73 Transcript Type= protein_coding
chr17	17724408	17728135	17724408	17728135	-	transcript1985.chr17.nnic@NA	transcript1985.chr17.nnic	NA	17724408	17728135	Gene ID= novel_gene_chr17_1986 TPM= 10.51 Transcript Type= NA
chr17	17776686	17779529	17776686	17779529	-	ENST00000543475.1@SMCR5	ENST00000543475.1	antisense_RNA	17776686	17779529	Gene ID= ENSG00000226746.2 TPM= 8.17 Transcript Type= antisense_RNA
chr17	17812073	17836987	17812073	17836987	-	ENST00000355815.8@SREBF1	ENST00000355815.8	protein_coding	17836727,17823518,17820090,17819538,17819320,17819013,17818260,17817696,17817256,17816958,17816457,17816207,17815860,17815221,17814835,17814615,17814245,17813569,17813368,17812073	17836987,17823607,17820521,17819725,17819454,17819234,17818374,17817916,17817457,17817136,17816718,17816373,17816028,17815329,17814944,17814747,17814410,17813769,17813479,17812851	Gene ID= ENSG00000072310.16 TPM= 24.79 Transcript Type= protein_coding
chr17	17812073	17823667	17812073	17823667	-	transcript1961.chr17.nic@SREBF1	transcript1961.chr17.nic	protein_coding	17823518,17820090,17819538,17819320,17819013,17818260,17817696,17817256,17816958,17816457,17816207,17815860,17815221,17814835,17814615,17814245,17813569,17813368,17812073	17823667,17820521,17819725,17819454,17819234,17818374,17817916,17817457,17817136,17816718,17816373,17816028,17815329,17814944,17814747,17814410,17813769,17813479,17812851	Gene ID= ENSG00000072310.16 TPM= 27.12 Transcript Type= NA
chr17	17812073	17820864	17812073	17820864	-	ENST00000395751.8@SREBF1	ENST00000395751.8	protein_coding	17819538,17819320,17819013,17818260,17817696,17817548,17817256,17816958,17816457,17816207,17815860,17815221,17814835,17814615,17814245,17813569,17813368,17812073	17820864,17819454,17819234,17818374,17817916,17817591,17817457,17817136,17816718,17816373,17816028,17815329,17814944,17814747,17814410,17813769,17813479,17812851	Gene ID= ENSG00000072310.16 TPM= 10.98 Transcript Type= nonsense_mediated_decay
chr17	17812073	17819951	17812073	17819951	-	ENST00000395757.5@SREBF1	ENST00000395757.5	protein_coding	17819538,17819320,17819013,17818260,17817696,17817256,17816958,17816457,17816207,17815860,17815221,17814835,17814615,17814245,17813569,17813368,17812073	17819951,17819454,17819234,17818374,17817916,17817457,17817136,17816718,17816373,17816028,17815329,17814944,17814747,17814410,17813769,17813479,17812851	Gene ID= ENSG00000072310.16 TPM= 15.65 Transcript Type= protein_coding
chr17	17812073	17837002	17812073	17837002	-	ENST00000261646.9@SREBF1	ENST00000261646.9	protein_coding	17836727,17820090,17819538,17819320,17819013,17818260,17817696,17817256,17816958,17816457,17816207,17815860,17815221,17814835,17814615,17814245,17813569,17813368,17812073	17837002,17820521,17819725,17819454,17819234,17818374,17817916,17817457,17817136,17816718,17816373,17816028,17815329,17814944,17814747,17814410,17813769,17813479,17812851	Gene ID= ENSG00000072310.16 TPM= 45.22 Transcript Type= protein_coding
chr17	17827181	17829204	17827181	17829204	+	transcript1983.chr17.nnic@NA	transcript1983.chr17.nnic	NA	17827181	17829204	Gene ID= novel_gene_chr17_1984 TPM= 5.84 Transcript Type= NA
chr17	17858227	17972446	17858227	17972446	-	transcript1996.chr17.nic@TOM1L2	transcript1996.chr17.nic	protein_coding	17972262,17907447,17898596,17893661,17884634,17882705,17879627,17869340,17866876,17866296,17862731,17858227	17972446,17907531,17898674,17893810,17884768,17882863,17879743,17869473,17866924,17866419,17862848,17861551	Gene ID= ENSG00000175662.17 TPM= 8.17 Transcript Type= NA
chr17	17911646	17972410	17911646	17972410	-	transcript2014.chr17.nnic@TOM1L2	transcript2014.chr17.nnic	protein_coding	17972262,17911646	17972410,17913609	Gene ID= ENSG00000175662.17 TPM= 3.5 Transcript Type= NA
chr17	17846825	17972397	17846825	17972397	-	ENST00000379504.7@TOM1L2	ENST00000379504.7	protein_coding	17972262,17907447,17898596,17893661,17884634,17882705,17879627,17869340,17866876,17866296,17862731,17861476,17850893,17848823,17846825	17972397,17907531,17898674,17893810,17884768,17882863,17879743,17869473,17866924,17866419,17862848,17861551,17850952,17848859,17847783	Gene ID= ENSG00000175662.17 TPM= 11.68 Transcript Type= protein_coding
chr17	17867600	17869321	17867600	17869321	+	transcript2015.chr17.nnic@NA	transcript2015.chr17.nnic	NA	17867600	17869321	Gene ID= novel_gene_chr17_2016 TPM= 3.5 Transcript Type= NA
chr17	18018010	18039168	18018010	18039168	-	ENST00000474627.7@ATPAF2	ENST00000474627.7	protein_coding	18038881,18028615,18028232,18026319,18024624,18021745,18021123,18018010	18039168,18028659,18028377,18026416,18024704,18021857,18021238,18018686	Gene ID= ENSG00000171953.15 TPM= 4.67 Transcript Type= protein_coding
chr17	18007734	18009434	18007734	18009434	+	transcript2017.chr17.nnic@NA	transcript2017.chr17.nnic	NA	18007734	18009434	Gene ID= novel_gene_chr17_2018 TPM= 2.34 Transcript Type= NA
chr17	18039292	18068404	18039292	18068404	+	ENST00000268719.8@GID4	ENST00000268719.8	protein_coding	18039292,18045147,18054127,18058868,18061845,18065180	18039902,18045206,18054234,18058969,18061975,18068404	Gene ID= ENSG00000141034.9 TPM= 19.27 Transcript Type= protein_coding
chr17	18039389	18068402	18039389	18068402	+	transcript2008.chr17.nnic@GID4	transcript2008.chr17.nnic	protein_coding	18039389,18045147,18054127,18058868,18065180	18039902,18045206,18054234,18058969,18068402	Gene ID= ENSG00000141034.9 TPM= 2.92 Transcript Type= NA
chr17	18039445	18057467	18039445	18057467	+	ENST00000376345.3@GID4	ENST00000376345.3	protein_coding	18039445,18045147,18054127,18056703	18039902,18045206,18054234,18057467	Gene ID= ENSG00000141034.9 TPM= 1.17 Transcript Type= protein_coding
chr17	18087886	18107971	18087886	18107971	+	ENST00000225729.7@DRG2	ENST00000225729.7	protein_coding	18087886,18093813,18098270,18099017,18099633,18100363,18100569,18101493,18101921,18103801,18104623,18106433,18107154	18088087,18093973,18098359,18099077,18099723,18100435,18100659,18101590,18101997,18103889,18104681,18106486,18107971	Gene ID= ENSG00000108591.9 TPM= 50.59 Transcript Type= protein_coding
chr17	18087977	18107969	18087977	18107969	+	transcript2026.chr17.nic@DRG2	transcript2026.chr17.nic	protein_coding	18087977,18093813,18098270,18099017,18099633,18100569,18101493,18101921,18103801,18104623,18106433,18107154	18088087,18093973,18098359,18099077,18100435,18100659,18101590,18101997,18103889,18104681,18106486,18107969	Gene ID= ENSG00000108591.9 TPM= 4.47 Transcript Type= NA
chr17	18087887	18107969	18087887	18107969	+	transcript2028.chr17.nic@DRG2	transcript2028.chr17.nic	protein_coding	18087887,18093813,18098270,18099017,18099633,18100569,18101493,18101921,18103801,18106433,18107154	18088087,18093973,18098359,18099077,18100435,18100659,18101590,18101997,18104681,18106486,18107969	Gene ID= ENSG00000108591.9 TPM= 2.34 Transcript Type= NA
chr17	18087968	18107970	18087968	18107970	+	ENST00000467099.6@DRG2	ENST00000467099.6	protein_coding	18087968,18093813,18098270,18099017,18099633,18100569,18101493,18101921,18103801,18104623,18106433,18107154	18088087,18093968,18098359,18099093,18100435,18100659,18101590,18101997,18103889,18104681,18106486,18107970	Gene ID= ENSG00000108591.9 TPM= 5.64 Transcript Type= nonsense_mediated_decay
chr17	18183988	18209954	18183988	18209954	+	transcript2045.chr17.nnic@ALKBH5	transcript2045.chr17.nnic	protein_coding	18183988,18184096,18194955,18206815,18208219	18184050,18185013,18195035,18206970,18209954	Gene ID= ENSG00000091542.8 TPM= 73.15 Transcript Type= NA
chr17	18184239	18209954	18184239	18209954	+	ENST00000399138.4@ALKBH5	ENST00000399138.4	protein_coding	18184239,18194955,18206815,18208219	18185013,18195035,18206970,18209954	Gene ID= ENSG00000091542.8 TPM= 50.97 Transcript Type= protein_coding
chr17	18244836	18258916	18244836	18258916	-	ENST00000327031.8@FLII	ENST00000327031.8	protein_coding	18258628,18256909,18256526,18255183,18254769,18254521,18254079,18253544,18253301,18252472,18251999,18251680,18251265,18250838,18249326,18249127,18248800,18248550,18247929,18247657,18247169,18246913,18246594,18246308,18246162,18245934,18245744,18245555,18245354,18244836	18258916,18257019,18256597,18255263,18254854,18254682,18254182,18253719,18253458,18252556,18252146,18251816,18251477,18251017,18249408,18249201,18248883,18248721,18248033,18247848,18247357,18247052,18246828,18246462,18246222,18246062,18245850,18245660,18245419,18245272	Gene ID= ENSG00000177731.15 TPM= 198.48 Transcript Type= protein_coding
chr17	18244841	18258723	18244841	18258723	-	ENST00000545457.6@FLII	ENST00000545457.6	protein_coding	18258628,18256909,18256526,18255183,18254769,18254079,18253544,18253301,18252472,18251999,18251680,18251265,18250838,18249326,18249127,18248800,18248550,18247929,18247657,18247169,18246913,18246594,18246308,18246162,18245934,18245744,18245555,18245354,18244841	18258723,18257019,18256597,18255263,18254854,18254182,18253719,18253458,18252556,18252146,18251813,18251477,18251017,18249408,18249201,18248883,18248721,18248033,18247848,18247357,18247052,18246828,18246462,18246222,18246062,18245850,18245660,18245419,18245272	Gene ID= ENSG00000177731.15 TPM= 18.09 Transcript Type= protein_coding
chr17	18260534	18266552	18260534	18266552	+	ENST00000323019.8@MIEF2	ENST00000323019.8	protein_coding	18260534,18262714,18263086,18263710	18260737,18262867,18263248,18266552	Gene ID= ENSG00000177427.12 TPM= 8.17 Transcript Type= protein_coding
chr17	18315310	18328055	18315310	18328055	+	ENST00000406438.4@SMCR8	ENST00000406438.4	protein_coding	18315310,18322617	18318149,18328055	Gene ID= ENSG00000176994.10 TPM= 16.35 Transcript Type= protein_coding
chr17	18327873	18363562	18327873	18363562	-	transcript2117.chr17.nic@SHMT1	transcript2117.chr17.nic	protein_coding	18363372,18360414,18355886,18353672,18348325,18347496,18340732,18340043,18335559,18333166,18330555,18329278,18327873	18363562,18360552,18356000,18353817,18348440,18347656,18340813,18340255,18335675,18333288,18330671,18329388,18328919	Gene ID= ENSG00000176974.19 TPM= 10.51 Transcript Type= NA
chr17	18327873	18363487	18327873	18363487	-	ENST00000316694.7@SHMT1	ENST00000316694.7	protein_coding	18363372,18355886,18353672,18348325,18347496,18340732,18340043,18335559,18333166,18330555,18329278,18327873	18363487,18356000,18353817,18348440,18347656,18340813,18340255,18335675,18333288,18330671,18329388,18328919	Gene ID= ENSG00000176974.19 TPM= 33.86 Transcript Type= protein_coding
chr17	18439905	18442892	18439905	18442892	+	ENST00000584962.5@KRT16P1	ENST00000584962.5	transcribed_unprocessed_pseudogene	18439905,18440954,18441174,18441445,18441695,18442438,18442645	18440517,18441036,18441330,18441605,18442343,18442484,18442892	Gene ID= ENSG00000214856.11 TPM= 2.34 Transcript Type= retained_intron
chr17	18590859	18625619	18590859	18625619	-	transcript2135.chr17.nic@CCDC144B	transcript2135.chr17.nic	transcribed_unprocessed_pseudogene	18625104,18622499,18610044,18607897,18605780,18603604,18595148,18594721,18590859	18625619,18622569,18610292,18607970,18606619,18603740,18595181,18594862,18591122	Gene ID= ENSG00000154874.15 TPM= 5.84 Transcript Type= NA
chr17	18697996	18736118	18697996	18736118	+	transcript2139.chr17.nic@TRIM16L	transcript2139.chr17.nic	protein_coding	18697996,18699154,18699360,18701357,18704619,18705063,18722237,18727525,18731070,18732039,18734877	18698114,18699275,18699457,18701445,18704765,18705164,18722332,18727758,18731235,18732134,18736118	Gene ID= ENSG00000108448.21 TPM= 7.01 Transcript Type= NA
chr17	18698017	18705912	18698017	18705912	+	transcript2140.chr17.nic@TRIM16L	transcript2140.chr17.nic	protein_coding	18698017,18699360,18701357,18704619	18699275,18699457,18701445,18705912	Gene ID= ENSG00000108448.21 TPM= 2.34 Transcript Type= NA
chr17	18780995	18806714	18780995	18806714	+	ENST00000307767.12@TVP23B	ENST00000307767.12	protein_coding	18780995,18789353,18790896,18797579,18798812,18804138,18805541	18781305,18789435,18791040,18797668,18798943,18804266,18806714	Gene ID= ENSG00000171928.13 TPM= 56.04 Transcript Type= protein_coding
chr17	18858107	18931215	18858107	18931215	+	ENST00000268835.6@PRPSAP2	ENST00000268835.6	protein_coding	18858107,18865469,18865802,18867282,18872583,18877698,18882568,18889822,18911103,18923914,18928811,18930540	18858261,18865564,18865952,18867334,18872649,18877870,18882683,18889877,18911251,18923984,18928957,18931215	Gene ID= ENSG00000141127.14 TPM= 8.17 Transcript Type= protein_coding
chr17	18858132	18931268	18858132	18931268	+	transcript2156.chr17.nic@PRPSAP2	transcript2156.chr17.nic	protein_coding	18858132,18865802,18867282,18872583,18877698,18882568,18889822,18911103,18923914,18928811,18930540	18858261,18865952,18867334,18872649,18877870,18882683,18889877,18911251,18923984,18928957,18931268	Gene ID= ENSG00000141127.14 TPM= 3.5 Transcript Type= NA
chr17	18968789	19004804	18968789	19004804	-	ENST00000388995.10@FAM83G	ENST00000388995.10	protein_coding	19004709,19003520,18988247,18979549,18977584,18968789	19004804,19004169,18988414,18979673,18978850,18971748	Gene ID= ENSG00000188522.14 TPM= 28.02 Transcript Type= protein_coding
chr17	19020673	19047637	19020673	19047637	-	ENST00000284154.9@GRAP	ENST00000284154.9	protein_coding	19046849,19041807,19035958,19024215,19020673	19047637,19041904,19036080,19024383,19022144	Gene ID= ENSG00000154016.13 TPM= 38.53 Transcript Type= protein_coding
chr17	19237401	19336715	19237401	19336715	+	transcript2167.chr17.nnic@EPN2	transcript2167.chr17.nnic	protein_coding	19237401,19274051,19281955,19282950,19309885,19312052,19313123,19328711,19329561,19331853,19333956	19237531,19274318,19282077,19283714,19309997,19312144,19313279,19328887,19329647,19332068,19336715	Gene ID= ENSG00000072134.15 TPM= 7.01 Transcript Type= NA
chr17	19237364	19336715	19237364	19336715	+	transcript2179.chr17.nic@EPN2	transcript2179.chr17.nic	protein_coding	19237364,19281955,19282950,19309885,19312052,19313123,19328711,19329561,19331853,19333956	19237531,19282077,19283714,19309997,19312144,19313279,19328887,19329647,19332068,19336715	Gene ID= ENSG00000072134.15 TPM= 13.43 Transcript Type= NA
chr17	19237377	19336715	19237377	19336715	+	ENST00000347697.6@EPN2	ENST00000347697.6	protein_coding	19237377,19281955,19282950,19309885,19312052,19313105,19328711,19329561,19331853,19333956	19237531,19282077,19283714,19309997,19312144,19313279,19328887,19329647,19332068,19336715	Gene ID= ENSG00000072134.15 TPM= 26.27 Transcript Type= protein_coding
chr17	19237364	19331531	19237364	19331531	+	transcript2182.chr17.nic@EPN2	transcript2182.chr17.nic	protein_coding	19237364,19281955,19282950,19309885,19312052,19313105,19328711,19329561,19330614	19237531,19282077,19283714,19309997,19312144,19313279,19328887,19329647,19331531	Gene ID= ENSG00000072134.15 TPM= 2.92 Transcript Type= NA
chr17	19237341	19336715	19237341	19336715	+	ENST00000314728.9@EPN2	ENST00000314728.9	protein_coding	19237341,19281955,19282950,19285620,19309885,19312052,19313105,19328711,19329561,19331853,19333956	19237531,19282077,19283714,19285790,19309997,19312144,19313279,19328887,19329647,19332068,19336715	Gene ID= ENSG00000072134.15 TPM= 5.84 Transcript Type= protein_coding
chr17	19237396	19283404	19237396	19283404	+	ENST00000577692.5@EPN2	ENST00000577692.5	protein_coding	19237396,19282950	19237531,19283404	Gene ID= ENSG00000072134.15 TPM= 1.17 Transcript Type= protein_coding
chr17	19343170	19362713	19343170	19362713	-	ENST00000261499.8@B9D1	ENST00000261499.8	protein_coding	19362507,19360320,19357840,19347784,19347269,19343790,19343170	19362713,19360388,19357951,19347880,19347331,19343857,19343461	Gene ID= ENSG00000108641.14 TPM= 2.34 Transcript Type= protein_coding
chr17	19340921	19362614	19340921	19362614	-	ENST00000461069.6@B9D1	ENST00000461069.6	protein_coding	19362507,19360320,19357840,19347784,19347269,19343790,19340921	19362614,19360388,19357951,19347880,19347331,19343857,19341326	Gene ID= ENSG00000108641.14 TPM= 1.17 Transcript Type= protein_coding
chr17	19346950	19362542	19346950	19362542	-	ENST00000440841.1@B9D1	ENST00000440841.1	protein_coding	19362507,19360320,19357840,19347784,19347269,19346950	19362542,19360388,19357951,19347880,19347331,19347173	Gene ID= ENSG00000108641.14 TPM= 1.17 Transcript Type= protein_coding
chr17	19378323	19383544	19378323	19383544	+	ENST00000395604.7@MAPK7	ENST00000395604.7	protein_coding	19378323,19378896,19379782,19380608,19381781,19382813,19383078	19378630,19379132,19379947,19381686,19382466,19382946,19383544	Gene ID= ENSG00000166484.19 TPM= 9.34 Transcript Type= protein_coding
chr17	19378253	19383544	19378253	19383544	+	ENST00000395602.8@MAPK7	ENST00000395602.8	protein_coding	19378253,19378896,19379782,19380608,19381781,19382813,19383078	19378542,19379132,19379947,19381686,19382466,19382946,19383544	Gene ID= ENSG00000166484.19 TPM= 12.84 Transcript Type= protein_coding
chr17	19383442	19387240	19383442	19387240	-	ENST00000299610.4@MFAP4	ENST00000299610.4	protein_coding	19387150,19386760,19386310,19385358,19385099,19383442	19387240,19386838,19386464,19385454,19385281,19384709	Gene ID= ENSG00000166482.11 TPM= 398.53 Transcript Type= protein_coding
chr17	19383442	19387190	19383442	19387190	-	ENST00000395592.6@MFAP4	ENST00000395592.6	protein_coding	19387041,19386760,19386310,19385358,19385099,19383442	19387190,19386838,19386464,19385454,19385281,19384709	Gene ID= ENSG00000166482.11 TPM= 155.68 Transcript Type= protein_coding
chr17	19445970	19446852	19445970	19446852	-	ENST00000458332.1@AC004448.1	ENST00000458332.1	processed_pseudogene	19445970	19446852	Gene ID= ENSG00000189343.7 TPM= 1.17 Transcript Type= processed_pseudogene
chr17	19533810	19579034	19533810	19579034	+	transcript2219.chr17.nic@SLC47A1	transcript2219.chr17.nic	protein_coding	19533810,19542393,19546435,19547985,19549635,19551424,19555212,19555593,19555796,19555995,19560188,19560418,19566790,19567096,19572780,19577327	19534074,19542494,19546503,19548133,19549677,19551468,19555309,19555690,19555909,19556062,19560296,19560493,19566859,19567228,19572861,19579034	Gene ID= ENSG00000142494.13 TPM= 2.34 Transcript Type= NA
chr17	19533867	19578902	19533867	19578902	+	transcript2221.chr17.nic@SLC47A1	transcript2221.chr17.nic	protein_coding	19533867,19542393,19546435,19547985,19549635,19551424,19555212,19555593,19555796,19555995,19560188,19560418,19566790,19567096,19577327	19534074,19542494,19546503,19548133,19549677,19551468,19555309,19555690,19555909,19556062,19560296,19560493,19566859,19567228,19578902	Gene ID= ENSG00000142494.13 TPM= 2.34 Transcript Type= NA
chr17	19533863	19578902	19533863	19578902	+	transcript2223.chr17.nic@SLC47A1	transcript2223.chr17.nic	protein_coding	19533863,19542393,19546435,19547985,19549635,19551424,19555212,19555593,19560188,19560418,19566790,19567096,19577327	19534074,19542494,19546503,19548133,19549677,19551468,19555309,19556062,19560296,19560493,19566859,19567228,19578902	Gene ID= ENSG00000142494.13 TPM= 2.34 Transcript Type= NA
chr17	19533854	19579034	19533854	19579034	+	ENST00000270570.8@SLC47A1	ENST00000270570.8	protein_coding	19533854,19542393,19546435,19547985,19549635,19551424,19555212,19555593,19555796,19555995,19560188,19560418,19566790,19567096,19571478,19572780,19577327	19534074,19542494,19546503,19548133,19549677,19551468,19555309,19555690,19555909,19556062,19560296,19560493,19566859,19567228,19571572,19572861,19579034	Gene ID= ENSG00000142494.13 TPM= 16.35 Transcript Type= protein_coding
chr17	19648723	19677596	19648723	19677596	+	ENST00000395575.6@ALDH3A2	ENST00000395575.6	protein_coding	19648723,19648935,19651547,19652547,19656366,19657745,19661127,19663333,19664948,19671721,19675558	19648843,19649124,19651778,19652632,19656574,19657862,19661268,19663499,19665047,19671956,19677596	Gene ID= ENSG00000072210.18 TPM= 12.94 Transcript Type= protein_coding
chr17	19648751	19677598	19648751	19677598	+	ENST00000579855.5@ALDH3A2	ENST00000579855.5	protein_coding	19648751,19648953,19651547,19652547,19656366,19657745,19661127,19663333,19664948,19671721,19675558	19648830,19649124,19651778,19652632,19656574,19657862,19661268,19663499,19665047,19671956,19677598	Gene ID= ENSG00000072210.18 TPM= 4.96 Transcript Type= protein_coding
chr17	19648526	19677596	19648526	19677596	+	ENST00000176643.10@ALDH3A2	ENST00000176643.10	protein_coding	19648526,19651547,19652547,19656366,19657745,19661127,19663333,19664948,19671721,19675558	19649124,19651778,19652632,19656574,19657862,19661268,19663499,19665047,19671956,19677596	Gene ID= ENSG00000072210.18 TPM= 79.49 Transcript Type= protein_coding
chr17	19648751	19677596	19648751	19677596	+	ENST00000339618.8@ALDH3A2	ENST00000339618.8	protein_coding	19648751,19651547,19652547,19656366,19657745,19661127,19663333,19664948,19671721,19673151,19675558	19649124,19651778,19652632,19656574,19657862,19661268,19663499,19665047,19671956,19673275,19677596	Gene ID= ENSG00000072210.18 TPM= 11.29 Transcript Type= protein_coding
chr17	19648806	19675742	19648806	19675742	+	ENST00000630662.2@ALDH3A2	ENST00000630662.2	protein_coding	19648806,19651547,19652547,19656366,19657745,19661127,19663333,19664948,19675558	19649124,19651778,19652632,19656574,19657862,19661268,19663499,19665047,19675742	Gene ID= ENSG00000072210.18 TPM= 1.17 Transcript Type= protein_coding
chr17	19737984	19748433	19737984	19748433	-	ENST00000225740.10@ALDH3A1	ENST00000225740.10	protein_coding	19748259,19744968,19743232,19742545,19742004,19741093,19740336,19739508,19738996,19738323,19737984	19748433,19745134,19743463,19742630,19742212,19741210,19740477,19739674,19739095,19738453,19738235	Gene ID= ENSG00000108602.17 TPM= 14.01 Transcript Type= protein_coding
chr17	19737984	19748341	19737984	19748341	-	ENST00000468746.5@ALDH3A1	ENST00000468746.5	protein_coding	19748259,19744968,19743232,19742545,19742004,19741093,19740336,19739508,19738323,19737984	19748341,19745134,19743463,19742630,19742212,19741210,19740477,19739674,19738453,19738235	Gene ID= ENSG00000108602.17 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr17	19770830	19867936	19770830	19867936	-	ENST00000361658.6@ULK2	ENST00000361658.6	protein_coding	19867328,19865736,19864803,19849742,19849369,19846737,19845304,19843121,19841489,19838501,19826139,19825094,19816749,19810378,19804693,19801777,19799495,19797396,19796095,19795622,19785937,19783697,19781889,19780986,19780472,19777581,19776309,19770830	19867936,19865828,19864844,19849774,19849405,19846910,19845377,19843222,19841547,19838583,19826186,19825182,19816920,19810438,19804830,19801922,19799575,19797682,19796282,19795725,19786086,19783905,19782067,19781104,19780629,19777716,19776407,19771067	Gene ID= ENSG00000083290.19 TPM= 17.51 Transcript Type= protein_coding
chr17	19896589	19900341	19896589	19900341	-	transcript2278.chr17.nnic@NA	transcript2278.chr17.nnic	NA	19896589	19900341	Gene ID= novel_gene_chr17_2279 TPM= 2.34 Transcript Type= NA
chr17	19904475	19977822	19904475	19977822	-	transcript2288.chr17.nic@AKAP10	transcript2288.chr17.nic	protein_coding	19977592,19968414,19962840,19958014,19947407,19941826,19939713,19936286,19931805,19924408,19920036,19909926,19909181,19904475	19977822,19968461,19963022,19958571,19947505,19941910,19939849,19936430,19931978,19924517,19920118,19909978,19909276,19906232	Gene ID= ENSG00000108599.14 TPM= 2.34 Transcript Type= NA
chr17	19904761	19913500	19904761	19913500	-	transcript2295.chr17.nnic@AKAP10	transcript2295.chr17.nnic	protein_coding	19912412,19909926,19909181,19904761	19913500,19909978,19909276,19906232	Gene ID= ENSG00000108599.14 TPM= 2.34 Transcript Type= NA
chr17	19966882	19968220	19966882	19968220	+	transcript2297.chr17.nnic@NA	transcript2297.chr17.nnic	NA	19966882	19968220	Gene ID= novel_gene_chr17_2298 TPM= 3.5 Transcript Type= NA
chr17	20156022	20237179	20156022	20237179	+	transcript2306.chr17.nic@SPECC1	transcript2306.chr17.nic	protein_coding	20156022,20227413,20231758,20232200,20236860	20156236,20227620,20231831,20232405,20237179	Gene ID= ENSG00000128487.16 TPM= 2.34 Transcript Type= NA
chr17	20156089	20237179	20156089	20237179	+	ENST00000395525.7@SPECC1	ENST00000395525.7	protein_coding	20156089,20204333,20227413,20231758,20232200,20236860	20156236,20205912,20227620,20231831,20232405,20237179	Gene ID= ENSG00000128487.16 TPM= 3.5 Transcript Type= protein_coding
chr17	20921045	20930046	20921045	20930046	+	ENST00000443508.6@CCDC144NL-AS1	ENST00000443508.6	antisense_RNA	20921045,20924359,20929431	20921169,20924833,20930046	Gene ID= ENSG00000233098.8 TPM= 3.5 Transcript Type= antisense_RNA
chr17	20999593	21043039	20999593	21043039	-	ENST00000261497.8@USP22	ENST00000261497.8	protein_coding	21042665,21028542,21021113,21019084,21017942,21015752,21012830,21011151,21007870,21006896,21004928,21004202,20999593	21043039,21028674,21021226,21019185,21018111,21015899,21012935,21011309,21007996,21006987,21004990,21004351,21003073	Gene ID= ENSG00000124422.11 TPM= 70.06 Transcript Type= protein_coding
chr17	21028933	21032953	21028933	21032953	+	transcript2320.chr17.nnic@NA	transcript2320.chr17.nnic	NA	21028933,21031610	21031565,21032953	Gene ID= novel_gene_chr17_2321 TPM= 3.5 Transcript Type= NA
chr17	21126652	21192030	21126652	21192030	+	ENST00000395511.7@DHRS7B	ENST00000395511.7	protein_coding	21126652,21172018,21178233,21183594,21184371,21188711,21190948	21126991,21172196,21178342,21183810,21184463,21188863,21192030	Gene ID= ENSG00000109016.17 TPM= 37.36 Transcript Type= protein_coding
chr17	21126964	21128873	21126964	21128873	+	ENST00000581020.1@DHRS7B	ENST00000581020.1	protein_coding	21126964	21128873	Gene ID= ENSG00000109016.17 TPM= 3.5 Transcript Type= retained_intron
chr17	21197958	21214161	21197958	21214161	-	ENST00000577419.5@TMEM11	ENST00000577419.5	protein_coding	21214091,21210936,21197958	21214161,21211227,21198840	Gene ID= ENSG00000178307.9 TPM= 35.03 Transcript Type= processed_transcript
chr17	21238870	21253410	21238870	21253410	-	ENST00000611551.1@NATD1	ENST00000611551.1	protein_coding	21253159,21244106,21238870	21253410,21244224,21243429	Gene ID= ENSG00000274180.1 TPM= 64.22 Transcript Type= protein_coding
chr17	21284710	21315228	21284710	21315228	+	transcript2335.chr17.nic@MAP2K3	transcript2335.chr17.nic	protein_coding	21284710,21295675,21296086,21298413,21298878,21300545,21300874,21302143,21303183,21304426,21305051,21312142,21313492,21314147	21284969,21295769,21296210,21298479,21298926,21300658,21300993,21302259,21303234,21304553,21305128,21312281,21313537,21315228	Gene ID= ENSG00000034152.18 TPM= 21.11 Transcript Type= NA
chr17	21284672	21315240	21284672	21315240	+	ENST00000342679.8@MAP2K3	ENST00000342679.8	protein_coding	21284672,21298413,21298878,21300545,21300874,21302143,21303183,21304426,21305051,21312142,21313492,21314147	21284969,21298479,21298926,21300658,21300993,21302259,21303234,21304553,21305128,21312281,21313537,21315240	Gene ID= ENSG00000034152.18 TPM= 102.84 Transcript Type= protein_coding
chr17	21284672	21315213	21284672	21315213	+	ENST00000395491.6@MAP2K3	ENST00000395491.6	protein_coding	21284672,21296086,21298413,21298878,21300545,21300874,21302143,21303183,21304426,21305051,21312142,21313492,21314147	21284969,21296210,21298479,21298926,21300658,21300993,21302259,21303234,21304553,21305128,21312281,21313537,21315213	Gene ID= ENSG00000034152.18 TPM= 15.47 Transcript Type= nonsense_mediated_decay
chr17	21288036	21315213	21288036	21315213	+	ENST00000361818.9@MAP2K3	ENST00000361818.9	protein_coding	21288036,21298413,21298878,21300545,21300874,21302143,21303183,21304426,21305051,21312142,21313492,21314147	21288091,21298479,21298926,21300658,21300993,21302259,21303234,21304553,21305128,21312281,21313537,21315213	Gene ID= ENSG00000034152.18 TPM= 2.34 Transcript Type= protein_coding
chr17	21308157	21312281	21308157	21312281	-	transcript2347.chr17.nnic@NA	transcript2347.chr17.nnic	NA	21308157	21312281	Gene ID= novel_gene_chr17_2348 TPM= 9.34 Transcript Type= NA
chr17	21376197	21419872	21376197	21419872	+	ENST00000583088.5@KCNJ12	ENST00000583088.5	protein_coding	21376197,21408519,21415287	21376913,21408640,21419872	Gene ID= ENSG00000184185.9 TPM= 4.67 Transcript Type= protein_coding
chr17	27294068	27313631	27294068	27313631	+	transcript2380.chr17.nic@WSB1	transcript2380.chr17.nic	protein_coding	27294068,27301788,27303367,27304780,27306782,27310061,27311509,27312210	27294435,27301956,27303635,27304911,27309272,27310174,27311616,27313631	Gene ID= ENSG00000109046.14 TPM= 17.13 Transcript Type= NA
chr17	27294093	27313631	27294093	27313631	+	ENST00000467843.6@WSB1	ENST00000467843.6	protein_coding	27294093,27301788,27303367,27304780,27306782,27307744,27310061,27311509,27312210	27294435,27301956,27303635,27304911,27306882,27309272,27310174,27311616,27313631	Gene ID= ENSG00000109046.14 TPM= 187.98 Transcript Type= retained_intron
chr17	27294131	27312887	27294131	27312887	+	ENST00000348811.6@WSB1	ENST00000348811.6	protein_coding	27294131,27304780,27306782,27309100,27310061,27311509,27312210	27294435,27304911,27306882,27309272,27310174,27311616,27312887	Gene ID= ENSG00000109046.14 TPM= 1.75 Transcript Type= protein_coding
chr17	27294115	27295557	27294115	27295557	+	transcript2396.chr17.nnic@NA	transcript2396.chr17.nnic	NA	27294115	27295557	Gene ID= novel_gene_chr17_2397 TPM= 7.59 Transcript Type= NA
chr17	27456452	27579908	27456452	27579908	+	transcript2422.chr17.nic@KSR1	transcript2422.chr17.nic	protein_coding	27456452,27550568,27577492	27456874,27550708,27579908	Gene ID= ENSG00000141068.13 TPM= 3.5 Transcript Type= NA
chr17	27620480	27626278	27620480	27626278	+	transcript2424.chr17.nnic@NA	transcript2424.chr17.nnic	NA	27620480	27626278	Gene ID= novel_gene_chr17_2425 TPM= 2.34 Transcript Type= NA
chr17	27629798	27649560	27629798	27649560	+	ENST00000395473.6@LGALS9	ENST00000395473.6	protein_coding	27629798,27638263,27640572,27642238,27643525,27645314,27645861,27646547,27647030,27647270,27648836	27631304,27638354,27640773,27642348,27643620,27645349,27645911,27646588,27647118,27647432,27649560	Gene ID= ENSG00000168961.16 TPM= 33.18 Transcript Type= protein_coding
chr17	27629798	27649560	27629798	27649560	+	ENST00000302228.9@LGALS9	ENST00000302228.9	protein_coding	27629798,27638263,27640572,27642238,27645314,27645861,27646547,27647030,27647270,27648836	27631304,27638354,27640773,27642348,27645349,27645911,27646588,27647118,27647432,27649560	Gene ID= ENSG00000168961.16 TPM= 57.7 Transcript Type= protein_coding
chr17	27631185	27649560	27631185	27649560	+	transcript2417.chr17.nic@LGALS9	transcript2417.chr17.nic	protein_coding	27631185,27638263,27640572,27642238,27645861,27646547,27647030,27647270,27648836	27631304,27638354,27640773,27642348,27645911,27646588,27647118,27647432,27649560	Gene ID= ENSG00000168961.16 TPM= 26.18 Transcript Type= NA
chr17	27631214	27649541	27631214	27649541	+	ENST00000467111.5@LGALS9	ENST00000467111.5	protein_coding	27631214,27638263,27640643,27642238,27645314,27645861,27646547,27647030,27647270,27648836	27631304,27638354,27640773,27642348,27645349,27645911,27646588,27647118,27647432,27649541	Gene ID= ENSG00000168961.16 TPM= 10.22 Transcript Type= nonsense_mediated_decay
chr17	27878314	27883869	27878314	27883869	-	transcript2429.chr17.nnic@LYRM9	transcript2429.chr17.nnic	protein_coding	27882569,27880274,27878314	27883869,27880368,27879490	Gene ID= ENSG00000232859.9 TPM= 9.34 Transcript Type= NA
chr17	28041714	28134101	28041714	28134101	+	transcript2440.chr17.nic@NLK	transcript2440.chr17.nic	protein_coding	28041714,28122603,28132620	28043331,28122732,28134101	Gene ID= ENSG00000087095.12 TPM= 3.5 Transcript Type= NA
chr17	28071436	28073776	28071436	28073776	-	transcript2445.chr17.nnic@NA	transcript2445.chr17.nnic	NA	28071436	28073776	Gene ID= novel_gene_chr17_2446 TPM= 2.34 Transcript Type= NA
chr17	28319095	28328685	28319095	28328685	+	ENST00000226230.7@TMEM97	ENST00000226230.7	protein_coding	28319095,28325503,28326534	28319365,28325647,28328685	Gene ID= ENSG00000109084.13 TPM= 11.68 Transcript Type= protein_coding
chr17	28328325	28335489	28328325	28335489	-	ENST00000588477.5@IFT20	ENST00000588477.5	protein_coding	28335340,28331859,28330443,28328325	28335489,28331987,28330528,28328733	Gene ID= ENSG00000109083.13 TPM= 1.95 Transcript Type= protein_coding
chr17	28328329	28335489	28328329	28335489	-	transcript2472.chr17.nic@IFT20	transcript2472.chr17.nic	protein_coding	28335340,28331859,28330443,28328329	28335489,28331987,28330528,28329276	Gene ID= ENSG00000109083.13 TPM= 5.84 Transcript Type= NA
chr17	28328329	28335440	28328329	28335440	-	ENST00000395418.7@IFT20	ENST00000395418.7	protein_coding	28335340,28331859,28330443,28329173,28328329	28335440,28331987,28330528,28329276,28328733	Gene ID= ENSG00000109083.13 TPM= 7.2 Transcript Type= protein_coding
chr17	28328329	28335449	28328329	28335449	-	ENST00000585089.5@IFT20	ENST00000585089.5	protein_coding	28335340,28332146,28331859,28330443,28329173,28328329	28335449,28332382,28331987,28330528,28329276,28328733	Gene ID= ENSG00000109083.13 TPM= 10.71 Transcript Type= protein_coding
chr17	28335704	28347009	28335704	28347009	+	ENST00000226225.6@TNFAIP1	ENST00000226225.6	protein_coding	28335704,28339408,28340309,28341237,28341404,28342247,28344364	28335856,28339726,28340478,28341326,28341456,28342442,28347009	Gene ID= ENSG00000109079.9 TPM= 301.24 Transcript Type= protein_coding
chr17	28347177	28357531	28347177	28357531	-	transcript2450.chr17.nnic@POLDIP2	transcript2450.chr17.nnic	protein_coding	28357288,28355795,28354488,28353695,28353241,28352912,28351664,28350766,28350438,28349497,28349083,28347177	28357531,28355876,28354585,28353791,28353316,28353019,28351800,28350792,28350563,28349626,28349162,28348231	Gene ID= ENSG00000004142.11 TPM= 4.67 Transcript Type= NA
chr17	28347177	28357522	28347177	28357522	-	ENST00000540200.5@POLDIP2	ENST00000540200.5	protein_coding	28357288,28355795,28354488,28353695,28353241,28352912,28351664,28350766,28350438,28349083,28347177	28357522,28355876,28354585,28353791,28353316,28353019,28351800,28350792,28350563,28349162,28348231	Gene ID= ENSG00000004142.11 TPM= 159.96 Transcript Type= protein_coding
chr17	28357581	28363683	28357581	28363683	+	ENST00000292114.7@TMEM199	ENST00000292114.7	protein_coding	28357581,28358916,28359315,28360529,28360735,28361157	28357881,28358989,28359404,28360571,28360847,28363683	Gene ID= ENSG00000244045.12 TPM= 14.01 Transcript Type= protein_coding
chr17	28367276	28370822	28367276	28370822	-	ENST00000226218.8@VTN	ENST00000226218.8	protein_coding	28370140,28369927,28369507,28369289,28368872,28368521,28367715,28367276	28370822,28370046,28369851,28369428,28369028,28368673,28368059,28367481	Gene ID= ENSG00000109072.13 TPM= 1.17 Transcript Type= protein_coding
chr17	28371662	28404049	28371662	28404049	+	ENST00000585482.5@SARM1	ENST00000585482.5	protein_coding	28371662,28381203,28384357,28384839,28385040,28388174,28388350,28395905,28396157	28372502,28381821,28384569,28384930,28385275,28388276,28388539,28396026,28404049	Gene ID= ENSG00000004139.13 TPM= 3.5 Transcript Type= protein_coding
chr17	28384670	28398163	28384670	28398163	+	ENST00000585453.5@SARM1	ENST00000585453.5	protein_coding	28384670,28385040,28388174,28388350,28395905,28396157	28384930,28385275,28388276,28388539,28396026,28398163	Gene ID= ENSG00000004139.13 TPM= 3.5 Transcript Type= retained_intron
chr17	28404316	28406168	28404316	28406168	-	ENST00000582590.1@SLC46A1	ENST00000582590.1	protein_coding	28405887,28404316	28406168,28405468	Gene ID= ENSG00000076351.12 TPM= 2.34 Transcript Type= retained_intron
chr17	28467822	28468406	28467822	28468406	+	ENST00000571702.1@RPS7P1	ENST00000571702.1	processed_pseudogene	28467822	28468406	Gene ID= ENSG00000263266.2 TPM= 8.17 Transcript Type= processed_pseudogene
chr17	28473293	28497778	28473293	28497778	+	ENST00000444914.7@SLC13A2	ENST00000444914.7	protein_coding	28473293,28489214,28490307,28490701,28491437,28491730,28493571,28494017,28494391,28495655,28496450,28497099	28473814,28489342,28490590,28490906,28491617,28491852,28493789,28494105,28494512,28495816,28496587,28497778	Gene ID= ENSG00000007216.14 TPM= 1.17 Transcript Type= protein_coding
chr17	28546707	28552668	28546707	28552668	-	ENST00000335765.8@UNC119	ENST00000335765.8	protein_coding	28552338,28548592,28547999,28547677,28546707	28552668,28548705,28548101,28547849,28547409	Gene ID= ENSG00000109103.11 TPM= 25.1 Transcript Type= protein_coding
chr17	28546708	28552631	28546708	28552631	-	ENST00000301032.8@UNC119	ENST00000301032.8	protein_coding	28552338,28548592,28547999,28546708	28552631,28548705,28548101,28547849	Gene ID= ENSG00000109103.11 TPM= 15.76 Transcript Type= protein_coding
chr17	28553387	28571872	28553387	28571872	-	ENST00000308360.7@PIGS	ENST00000308360.7	protein_coding	28571463,28571049,28570852,28563818,28563431,28561422,28560049,28558476,28556827,28556166,28554851,28553387	28571872,28571188,28570963,28563907,28563522,28561629,28560191,28558590,28556972,28556266,28555061,28554495	Gene ID= ENSG00000087111.20 TPM= 112.67 Transcript Type= protein_coding
chr17	28553387	28571536	28553387	28571536	-	ENST00000395346.6@PIGS	ENST00000395346.6	protein_coding	28571049,28570852,28563818,28563431,28561422,28560049,28558476,28556827,28556166,28554851,28553387	28571536,28570963,28563907,28563522,28561629,28560191,28558590,28556972,28556266,28555061,28554495	Gene ID= ENSG00000087111.20 TPM= 34.44 Transcript Type= protein_coding
chr17	28573115	28577264	28573115	28577264	-	ENST00000226253.8@ALDOC	ENST00000226253.8	protein_coding	28576801,28575421,28575123,28574952,28574696,28574494,28574067,28573735,28573115	28577264,28575544,28575334,28575006,28574856,28574577,28574241,28573934,28573621	Gene ID= ENSG00000109107.13 TPM= 5.84 Transcript Type= protein_coding
chr17	28577574	28599279	28577574	28599279	-	ENST00000321765.9@SPAG5	ENST00000321765.9	protein_coding	28598896,28598510,28591982,28591698,28586425,28586090,28585864,28585534,28585319,28585102,28584652,28584333,28584150,28583853,28583511,28580009,28579751,28579365,28579141,28578672,28578373,28578218,28578010,28577574	28599279,28598635,28593066,28591872,28586499,28586182,28585998,28585653,28585411,28585215,28584745,28584480,28584252,28583986,28583649,28580120,28579837,28579485,28579252,28578752,28578528,28578292,28578090,28577770	Gene ID= ENSG00000076382.16 TPM= 1.17 Transcript Type= protein_coding
chr17	28614440	28645131	28614440	28645131	-	ENST00000528896.6@KIAA0100	ENST00000528896.6	protein_coding	28644989,28644058,28643610,28643164,28642869,28642275,28641889,28640560,28639901,28639575,28639315,28638524,28638252,28637836,28636965,28634517,28633895,28633549,28633283,28632942,28632049,28631820,28631479,28628265,28624233,28623760,28621399,28620988,28620509,28619860,28619654,28618791,28617232,28616889,28616618,28616379,28616096,28615664,28614440	28645131,28644187,28643659,28643311,28642987,28642335,28642078,28640683,28640025,28639642,28639460,28638642,28638415,28638094,28637170,28635609,28634086,28633751,28633401,28633162,28632239,28631919,28631681,28628559,28624390,28623966,28621498,28621170,28620630,28620015,28619775,28618971,28617318,28616999,28616753,28616509,28616197,28615798,28615246	Gene ID= ENSG00000007202.14 TPM= 85.23 Transcript Type= protein_coding
chr17	28648589	28662185	28648589	28662185	-	ENST00000592250.5@SDF2	ENST00000592250.5	protein_coding	28662046,28655287,28648589	28662185,28655483,28649276	Gene ID= ENSG00000132581.9 TPM= 10.51 Transcript Type= processed_transcript
chr17	28662198	28701735	28662198	28701735	+	ENST00000347486.8@SUPT6H	ENST00000347486.8	protein_coding	28662198,28672757,28673371,28674283,28674537,28674970,28675401,28676157,28677715,28678076,28678545,28678821,28681256,28681882,28682727,28682942,28683268,28683621,28684586,28684844,28686339,28686654,28687088,28687304,28688091,28689354,28690082,28690921,28693696,28695352,28696844,28697620,28697906,28699781,28700173,28700346,28700941,28701439	28662342,28672858,28673510,28674441,28674613,28675162,28675485,28676430,28677816,28678192,28678634,28678963,28681404,28681980,28682856,28683092,28683422,28683816,28684725,28684961,28686415,28686789,28687225,28687471,28688218,28689561,28690229,28691063,28693836,28695547,28697082,28697733,28698030,28699893,28700250,28700512,28701128,28701735	Gene ID= ENSG00000109111.14 TPM= 2.92 Transcript Type= protein_coding
chr17	28662091	28702684	28662091	28702684	+	ENST00000314616.10@SUPT6H	ENST00000314616.10	protein_coding	28662091,28673371,28674283,28674537,28674970,28675401,28676157,28677715,28678076,28678545,28678821,28681256,28681882,28682727,28682942,28683268,28683621,28684586,28684844,28686339,28686654,28687088,28687304,28688091,28689354,28690082,28690921,28693696,28695352,28696844,28697620,28697906,28699781,28700173,28700346,28700941,28701439	28662342,28673510,28674441,28674613,28675162,28675485,28676430,28677816,28678192,28678634,28678963,28681404,28681980,28682856,28683092,28683422,28683816,28684725,28684961,28686415,28686789,28687225,28687471,28688218,28689561,28690229,28691063,28693836,28695547,28697082,28697733,28698030,28699893,28700250,28700512,28701128,28702684	Gene ID= ENSG00000109111.14 TPM= 18.1 Transcript Type= protein_coding
chr17	28663830	28667185	28663830	28667185	-	transcript2548.chr17.nnic@NA	transcript2548.chr17.nnic	NA	28663830	28667185	Gene ID= novel_gene_chr17_2549 TPM= 40.87 Transcript Type= NA
chr17	28703197	28712312	28703197	28712312	-	transcript2550.chr17.nnic@PROCA1	transcript2550.chr17.nnic	protein_coding	28712226,28706680,28704708,28704307,28703197	28712312,28706763,28704843,28704616,28704212	Gene ID= ENSG00000167525.13 TPM= 2.34 Transcript Type= NA
chr17	28714284	28718415	28714284	28718415	-	ENST00000301043.10@RAB34	ENST00000301043.10	protein_coding	28718122,28717213,28716903,28715993,28715800,28715641,28715456,28715195,28715032,28714793,28714284	28718415,28717425,28716994,28716058,28715901,28715705,28715507,28715276,28715122,28714900,28714710	Gene ID= ENSG00000109113.19 TPM= 38.18 Transcript Type= protein_coding
chr17	28714284	28718194	28714284	28718194	-	transcript2565.chr17.nic@RAB34	transcript2565.chr17.nic	protein_coding	28718122,28717213,28716903,28715993,28715800,28715641,28715456,28715219,28715032,28714793,28714284	28718194,28717425,28716994,28716058,28715901,28715705,28715507,28715276,28715122,28714900,28714710	Gene ID= ENSG00000109113.19 TPM= 11.52 Transcript Type= NA
chr17	28714281	28717890	28714281	28717890	-	ENST00000395245.8@RAB34	ENST00000395245.8	protein_coding	28717213,28716903,28715993,28715800,28715641,28715456,28715195,28715032,28714793,28714281	28717890,28716994,28716058,28715901,28715705,28715507,28715276,28715122,28714900,28714710	Gene ID= ENSG00000109113.19 TPM= 65.03 Transcript Type= protein_coding
chr17	28714285	28718183	28714285	28718183	-	ENST00000415040.6@RAB34	ENST00000415040.6	protein_coding	28718122,28717213,28716903,28715800,28715641,28715456,28715195,28715032,28714793,28714285	28718183,28717425,28716994,28715901,28715705,28715507,28715276,28715122,28714900,28714710	Gene ID= ENSG00000109113.19 TPM= 1.79 Transcript Type= protein_coding
chr17	28714285	28718166	28714285	28718166	-	ENST00000450529.5@RAB34	ENST00000450529.5	protein_coding	28718122,28717213,28716903,28715993,28715800,28715641,28715456,28715219,28715032,28714793,28714285	28718166,28717291,28716994,28716058,28715901,28715705,28715507,28715276,28715122,28714900,28714710	Gene ID= ENSG00000109113.19 TPM= 1.4 Transcript Type= protein_coding
chr17	28719393	28724359	28719393	28724359	+	ENST00000422514.6@RPL23A	ENST00000422514.6	protein_coding	28719393,28720707,28722723,28723571,28723867	28720030,28720890,28722899,28723640,28724359	Gene ID= ENSG00000198242.13 TPM= 261.54 Transcript Type= protein_coding
chr17	28724348	28726208	28724348	28726208	-	ENST00000292090.7@TLCD1	ENST00000292090.7	protein_coding	28725904,28725481,28725304,28724348	28726208,28725563,28725386,28724893	Gene ID= ENSG00000160606.10 TPM= 11.68 Transcript Type= protein_coding
chr17	28728758	28742575	28728758	28742575	+	transcript2560.chr17.nic@NEK8	transcript2560.chr17.nic	protein_coding	28728758,28733983,28734772,28737306,28737819,28738095,28738671,28739084,28740463,28740822,28741078,28741413,28741959	28728860,28734188,28735371,28737736,28738000,28738245,28738747,28739201,28740613,28740985,28741236,28741571,28742575	Gene ID= ENSG00000160602.13 TPM= 4.67 Transcript Type= NA
chr17	28743984	28750958	28743984	28750958	+	ENST00000262395.9@TRAF4	ENST00000262395.9	protein_coding	28743984,28747213,28747843,28748017,28748262,28748511,28748945	28744255,28747264,28747947,28748178,28748423,28748666,28750958	Gene ID= ENSG00000076604.14 TPM= 17.51 Transcript Type= protein_coding
chr17	28755980	28842823	28755980	28842823	-	ENST00000581407.5@FAM222B	ENST00000581407.5	protein_coding	28842682,28766586,28755980	28842823,28766707,28759876	Gene ID= ENSG00000173065.13 TPM= 4.67 Transcript Type= protein_coding
chr17	28854938	28861067	28854938	28861067	+	ENST00000254928.9@ERAL1	ENST00000254928.9	protein_coding	28854938,28856264,28856505,28857939,28858146,28858374,28858576,28858964,28859203,28860431	28855317,28856391,28856582,28857985,28858207,28858486,28858824,28859113,28859283,28861067	Gene ID= ENSG00000132591.11 TPM= 60.71 Transcript Type= protein_coding
chr17	28879335	28897679	28879335	28897679	-	ENST00000394908.8@FLOT2	ENST00000394908.8	protein_coding	28897526,28888945,28884225,28883108,28882573,28882337,28882118,28881814,28881192,28880713,28879335	28897679,28889026,28884315,28883231,28882691,28882450,28882237,28882028,28881375,28880862,28880599	Gene ID= ENSG00000132589.15 TPM= 279.28 Transcript Type= protein_coding
chr17	28879339	28897736	28879339	28897736	-	transcript2628.chr17.nic@FLOT2	transcript2628.chr17.nic	protein_coding	28897526,28888945,28883108,28882573,28882337,28882118,28881814,28881192,28880713,28879339	28897736,28889026,28883231,28882691,28882450,28882237,28882028,28881375,28880862,28880599	Gene ID= ENSG00000132589.15 TPM= 31.36 Transcript Type= NA
chr17	28879341	28897652	28879341	28897652	-	ENST00000585169.5@FLOT2	ENST00000585169.5	protein_coding	28897526,28888945,28885857,28883108,28882573,28882337,28882118,28881814,28881192,28880713,28879341	28897652,28889026,28885947,28883231,28882691,28882450,28882237,28882028,28881375,28880862,28880599	Gene ID= ENSG00000132589.15 TPM= 28.47 Transcript Type= protein_coding
chr17	28879339	28897653	28879339	28897653	-	ENST00000580805.5@FLOT2	ENST00000580805.5	protein_coding	28897526,28888945,28885857,28884225,28883108,28882573,28882337,28882118,28881814,28881192,28880713,28879339	28897653,28889026,28885947,28884315,28883231,28882691,28882450,28882237,28882028,28881375,28880862,28880599	Gene ID= ENSG00000132589.15 TPM= 10.73 Transcript Type= nonsense_mediated_decay
chr17	28897781	28903071	28897781	28903071	-	ENST00000394901.7@DHRS13	ENST00000394901.7	protein_coding	28902583,28901493,28900990,28897781	28903071,28901616,28901301,28898892	Gene ID= ENSG00000167536.13 TPM= 9.92 Transcript Type= protein_coding
chr17	28897781	28903071	28897781	28903071	-	ENST00000378895.8@DHRS13	ENST00000378895.8	protein_coding	28902818,28902583,28901493,28900990,28897781	28903071,28902701,28901616,28901301,28898892	Gene ID= ENSG00000167536.13 TPM= 25.1 Transcript Type= protein_coding
chr17	28905250	28951771	28905250	28951771	-	ENST00000332830.8@PHF12	ENST00000332830.8	protein_coding	28950895,28950065,28926991,28923909,28921688,28919143,28917285,28913879,28912482,28911112,28910226,28908783,28907590,28906856,28905250	28951771,28950246,28927063,28924302,28921808,28919275,28917449,28914037,28913277,28911237,28910369,28908881,28907672,28906994,28906517	Gene ID= ENSG00000109118.13 TPM= 18.68 Transcript Type= protein_coding
chr17	29073521	29140421	29073521	29140421	-	transcript2647.chr17.nic@MYO18A	transcript2647.chr17.nic	protein_coding	29140340,29122166,29121851,29121547,29120998,29120616,29119335,29118377,29118045,29116444,29115664,29115351,29114907,29114011,29111722,29111424,29110436,29109858,29107080,29103599,29099634,29098826,29098356,29098105,29097788,29097223,29096761,29094936,29094650,29093980,29093323,29092855,29092343,29090810,29090532,29089961,29086936,29086438,29085604,29082316,29073521	29140421,29122253,29121957,29121723,29121211,29120758,29119435,29118440,29118189,29116455,29115840,29115441,29115099,29114097,29111863,29111583,29110622,29110101,29107189,29103664,29099762,29098969,29098445,29098224,29097899,29097350,29096915,29095059,29094850,29094090,29093427,29093001,29092456,29090926,29090615,29090098,29087121,29086577,29085648,29082438,29074914	Gene ID= ENSG00000196535.15 TPM= 6.42 Transcript Type= NA
chr17	29095890	29107627	29095890	29107627	-	transcript2654.chr17.nic@MYO18A	transcript2654.chr17.nic	protein_coding	29107080,29103599,29099634,29098826,29098356,29098105,29097788,29095890	29107627,29103664,29099762,29098969,29098445,29098224,29097899,29097350	Gene ID= ENSG00000196535.15 TPM= 2.34 Transcript Type= NA
chr17	29073521	29084657	29073521	29084657	-	transcript2657.chr17.nic@MYO18A	transcript2657.chr17.nic	protein_coding	29082316,29073521	29084657,29074914	Gene ID= ENSG00000196535.15 TPM= 12.84 Transcript Type= NA
chr17	29071124	29180412	29071124	29180412	-	ENST00000527372.6@MYO18A	ENST00000527372.6	protein_coding	29180313,29165942,29122166,29121851,29121547,29120998,29120616,29119335,29118377,29118045,29116444,29115664,29115351,29114907,29114011,29111722,29111424,29110436,29109858,29107080,29103599,29099634,29098826,29098356,29098105,29097788,29097223,29096761,29094936,29094650,29093980,29093323,29092855,29092343,29090810,29090532,29089961,29086936,29086438,29085604,29082316,29071124	29180412,29167021,29122253,29121957,29121723,29121211,29120758,29119435,29118440,29118189,29116455,29115840,29115441,29115099,29114097,29111863,29111583,29110622,29110101,29107189,29103664,29099762,29098969,29098445,29098224,29097899,29097350,29096915,29095059,29094850,29094090,29093427,29093001,29092456,29090926,29090615,29090098,29087121,29086577,29085648,29082438,29074914	Gene ID= ENSG00000196535.15 TPM= 7.59 Transcript Type= protein_coding
chr17	29170525	29171917	29170525	29171917	+	transcript2658.chr17.nnic@NA	transcript2658.chr17.nnic	NA	29170525	29171917	Gene ID= novel_gene_chr17_2659 TPM= 3.5 Transcript Type= NA
chr17	29255836	29294118	29255836	29294118	-	ENST00000225388.8@NUFIP2	ENST00000225388.8	protein_coding	29293783,29285992,29267498,29255836	29294118,29287716,29267530,29264591	Gene ID= ENSG00000108256.8 TPM= 14.01 Transcript Type= protein_coding
chr17	29468137	29469476	29468137	29469476	-	transcript2674.chr17.nnic@NA	transcript2674.chr17.nnic	NA	29468137	29469476	Gene ID= novel_gene_chr17_2675 TPM= 3.5 Transcript Type= NA
chr17	29544555	29551021	29544555	29551021	+	transcript2672.chr17.nnic@NA	transcript2672.chr17.nnic	NA	29544555	29551021	Gene ID= novel_gene_chr17_2673 TPM= 4.67 Transcript Type= NA
chr17	29560547	29567137	29560547	29567137	-	ENST00000307201.4@ABHD15	ENST00000307201.4	protein_coding	29566086,29560547	29567137,29563086	Gene ID= ENSG00000168792.4 TPM= 15.18 Transcript Type= protein_coding
chr17	29566262	29573157	29566262	29573157	+	transcript2687.chr17.nnic@TP53I13	transcript2687.chr17.nnic	protein_coding	29566262,29568278,29569018,29569318,29571591,29571857,29572142,29572812	29567980,29568548,29569086,29569359,29571719,29572057,29572697,29573157	Gene ID= ENSG00000167543.15 TPM= 7.01 Transcript Type= NA
chr17	29567168	29573157	29567168	29573157	+	transcript2695.chr17.nic@TP53I13	transcript2695.chr17.nic	protein_coding	29567168,29568278,29569018,29569318,29571591,29571857,29572142,29572812	29567411,29568548,29569086,29569359,29571719,29572057,29572697,29573157	Gene ID= ENSG00000167543.15 TPM= 9.63 Transcript Type= NA
chr17	29566355	29573157	29566355	29573157	+	transcript2700.chr17.nnic@TP53I13	transcript2700.chr17.nnic	protein_coding	29566355,29568278,29569318,29571591,29571857,29572142,29572812	29567980,29569086,29569359,29571719,29572057,29572697,29573157	Gene ID= ENSG00000167543.15 TPM= 11.68 Transcript Type= NA
chr17	29567168	29573157	29567168	29573157	+	transcript2704.chr17.nic@TP53I13	transcript2704.chr17.nic	protein_coding	29567168,29568278,29569318,29571591,29571857,29572142,29572812	29567411,29569086,29569359,29571719,29572057,29572697,29573157	Gene ID= ENSG00000167543.15 TPM= 28.02 Transcript Type= NA
chr17	29568047	29573157	29568047	29573157	+	transcript2706.chr17.nic@TP53I13	transcript2706.chr17.nic	protein_coding	29568047,29569018,29569318,29571591,29571857,29572142,29572812	29568548,29569086,29569359,29571719,29572057,29572697,29573157	Gene ID= ENSG00000167543.15 TPM= 7.3 Transcript Type= NA
chr17	29570689	29573156	29570689	29573156	+	ENST00000579674.1@TP53I13	ENST00000579674.1	protein_coding	29570689	29573156	Gene ID= ENSG00000167543.15 TPM= 1.17 Transcript Type= retained_intron
chr17	29568644	29573157	29568644	29573157	+	ENST00000301057.7@TP53I13	ENST00000301057.7	protein_coding	29568644,29569018,29569318,29571591,29571857,29572142,29572812	29568830,29569086,29569359,29571719,29572057,29572697,29573157	Gene ID= ENSG00000167543.15 TPM= 97.2 Transcript Type= protein_coding
chr17	29573475	29589628	29573475	29589628	-	transcript2677.chr17.nnic@GIT1	transcript2677.chr17.nnic	protein_coding	29589550,29589327,29583483,29582925,29582698,29581927,29581742,29581338,29578731,29578299,29577645,29577136,29576863,29576522,29576220,29576078,29575812,29575630,29575288,29575079,29573475	29589628,29589437,29583616,29583037,29582803,29582144,29581836,29581380,29578779,29578371,29577742,29577247,29576996,29576674,29576450,29576131,29575898,29575703,29575470,29575142,29574914	Gene ID= ENSG00000108262.15 TPM= 30.94 Transcript Type= NA
chr17	29573469	29589627	29573469	29589627	-	ENST00000225394.7@GIT1	ENST00000225394.7	protein_coding	29589327,29583483,29582925,29582698,29581927,29581742,29581338,29578731,29578299,29577645,29577136,29576863,29576522,29576220,29576078,29575812,29575630,29575288,29575079,29573469	29589627,29583616,29583037,29582803,29582144,29581836,29581380,29578779,29578371,29577742,29577247,29576996,29576674,29576450,29576131,29575898,29575703,29575470,29575142,29574914	Gene ID= ENSG00000108262.15 TPM= 88.15 Transcript Type= protein_coding
chr17	29614978	29622912	29614978	29622912	-	transcript2726.chr17.nic@CORO6	transcript2726.chr17.nic	protein_coding	29622688,29621224,29619651,29619060,29618790,29617242,29616938,29616702,29616279,29615945,29614978	29622912,29621484,29619773,29619189,29618971,29618632,29617042,29616847,29616336,29616175,29615854	Gene ID= ENSG00000167549.18 TPM= 2.34 Transcript Type= NA
chr17	29614763	29622899	29614763	29622899	-	ENST00000459686.5@CORO6	ENST00000459686.5	protein_coding	29622688,29621224,29619651,29619060,29618790,29616938,29616702,29616279,29615945,29614763	29622899,29621423,29619773,29619189,29618971,29618632,29616847,29616336,29616175,29615854	Gene ID= ENSG00000167549.18 TPM= 5.84 Transcript Type= retained_intron
chr17	29757800	29760736	29757800	29760736	+	transcript2737.chr17.nnic@NA	transcript2737.chr17.nnic	NA	29757800	29760736	Gene ID= novel_gene_chr17_2738 TPM= 8.17 Transcript Type= NA
chr17	30116808	30186474	30116808	30186474	+	transcript2746.chr17.nnic@NSRP1	transcript2746.chr17.nnic	protein_coding	30116808,30118080,30163067,30172542,30178071,30179090,30180908,30184615	30116863,30118173,30163162,30172598,30178199,30179297,30181016,30186474	Gene ID= ENSG00000126653.17 TPM= 3.01 Transcript Type= NA
chr17	30116781	30186475	30116781	30186475	+	ENST00000247026.9@NSRP1	ENST00000247026.9	protein_coding	30116781,30118080,30172542,30178071,30179090,30180908,30184615	30116863,30118173,30172598,30178199,30179297,30181016,30186475	Gene ID= ENSG00000126653.17 TPM= 35.32 Transcript Type= protein_coding
chr17	30116815	30186474	30116815	30186474	+	transcript2753.chr17.nic@NSRP1	transcript2753.chr17.nic	protein_coding	30116815,30163067,30172542,30178071,30179090,30180908,30184615	30116863,30163162,30172598,30178199,30179297,30181016,30186474	Gene ID= ENSG00000126653.17 TPM= 3.01 Transcript Type= NA
chr17	30116807	30186474	30116807	30186474	+	ENST00000612959.4@NSRP1	ENST00000612959.4	protein_coding	30116807,30172542,30178071,30179090,30180908,30184615	30116863,30172598,30178199,30179297,30181016,30186474	Gene ID= ENSG00000126653.17 TPM= 10.02 Transcript Type= protein_coding
chr17	30117761	30120241	30117761	30120241	-	transcript2762.chr17.nnic@NA	transcript2762.chr17.nnic	NA	30117761	30120241	Gene ID= novel_gene_chr17_2763 TPM= 10.51 Transcript Type= NA
chr17	30194319	30236002	30194319	30236002	-	ENST00000401766.6@SLC6A4	ENST00000401766.6	protein_coding	30235613,30221616,30218797,30218118,30217166,30216082,30215611,30212740,30211312,30210515,30209143,30207732,30203172,30194319	30236002,30222081,30218931,30218337,30217304,30216216,30215714,30212867,30211424,30210646,30209242,30207832,30203339,30198530	Gene ID= ENSG00000108576.9 TPM= 26.85 Transcript Type= protein_coding
chr17	30248195	30291994	30248195	30291994	-	ENST00000261714.10@BLMH	ENST00000261714.10	protein_coding	30291807,30291311,30289373,30287806,30286814,30285388,30274042,30272741,30272561,30271271,30266885,30248195	30291994,30291508,30289482,30287947,30286902,30285480,30274197,30272899,30272628,30271388,30266954,30249168	Gene ID= ENSG00000108578.14 TPM= 38.53 Transcript Type= protein_coding
chr17	30477377	30522805	30477377	30522805	+	ENST00000451249.6@GOSR1	ENST00000451249.6	protein_coding	30477377,30481143,30484214,30484663,30490126,30492679,30510880,30519939,30522254	30477464,30481257,30484301,30484770,30490217,30492753,30510909,30520021,30522805	Gene ID= ENSG00000108587.15 TPM= 3.5 Transcript Type= protein_coding
chr17	30477362	30527592	30477362	30527592	+	ENST00000225724.9@GOSR1	ENST00000225724.9	protein_coding	30477362,30481143,30484214,30484663,30490126,30492679,30510880,30519939,30522254	30477464,30481263,30484301,30484770,30490217,30492753,30510909,30520021,30527592	Gene ID= ENSG00000108587.15 TPM= 9.34 Transcript Type= protein_coding
chr17	30477442	30522558	30477442	30522558	+	ENST00000414833.2@GOSR1	ENST00000414833.2	protein_coding	30477442,30481143,30484214,30484663,30490126,30492679,30510880,30519939,30522254	30477486,30481263,30484301,30484770,30490217,30492753,30510909,30520021,30522558	Gene ID= ENSG00000108587.15 TPM= 1.17 Transcript Type= protein_coding
chr17	30600375	30634323	30600375	30634323	+	transcript2816.chr17.nnic@AC005562.1	transcript2816.chr17.nnic	processed_transcript	30600375,30607552,30608430,30610889,30631755,30633098,30633994	30600916,30607665,30608562,30610942,30631979,30633390,30634323	Gene ID= ENSG00000214719.11 TPM= 3.5 Transcript Type= NA
chr17	30731930	30770050	30731930	30770050	+	transcript2828.chr17.nnic@SUZ12P1	transcript2828.chr17.nnic	transcribed_unprocessed_pseudogene	30731930,30734897,30735033,30743301,30759491,30766503,30768834,30769001,30769872	30732123,30734943,30735097,30743369,30759539,30766588,30768853,30769064,30770050	Gene ID= ENSG00000264538.6 TPM= 2.34 Transcript Type= NA
chr17	30731643	30770050	30731643	30770050	+	transcript2830.chr17.nic@SUZ12P1	transcript2830.chr17.nic	transcribed_unprocessed_pseudogene	30731643,30734897,30735033,30743301,30759491,30766503,30768834,30769872	30732123,30734943,30735097,30743369,30759539,30766588,30769064,30770050	Gene ID= ENSG00000264538.6 TPM= 4.67 Transcript Type= NA
chr17	30731643	30770050	30731643	30770050	+	transcript2831.chr17.nnic@SUZ12P1	transcript2831.chr17.nnic	transcribed_unprocessed_pseudogene	30731643,30734897,30735033,30759491,30766503,30768834,30769001,30769872	30732123,30734943,30735097,30759539,30766588,30768867,30769064,30770050	Gene ID= ENSG00000264538.6 TPM= 2.34 Transcript Type= NA
chr17	30782684	30824776	30782684	30824776	-	ENST00000324238.6@CRLF3	ENST00000324238.6	protein_coding	30824523,30803901,30797311,30796160,30793450,30792440,30785919,30782684	30824776,30804108,30797398,30796337,30793672,30792572,30786031,30784443	Gene ID= ENSG00000176390.11 TPM= 52.54 Transcript Type= protein_coding
chr17	30898983	30906820	30898983	30906820	-	ENST00000581216.5@TEFM	ENST00000581216.5	protein_coding	30906168,30904066,30900413,30898983	30906820,30904529,30900562,30899606	Gene ID= ENSG00000172171.10 TPM= 5.84 Transcript Type= protein_coding
chr17	30898986	30906235	30898986	30906235	-	ENST00000580840.1@TEFM	ENST00000580840.1	protein_coding	30906168,30904066,30898986	30906235,30904529,30900562	Gene ID= ENSG00000172171.10 TPM= 1.17 Transcript Type= protein_coding
chr17	30921680	30959322	30921680	30959322	+	ENST00000330889.7@ADAP2	ENST00000330889.7	protein_coding	30921680,30922940,30926827,30931889,30934185,30944907,30949287,30953288,30954478,30956241,30957835	30922108,30923070,30926918,30931968,30934297,30945053,30949370,30953350,30954555,30956469,30959322	Gene ID= ENSG00000184060.10 TPM= 3.5 Transcript Type= protein_coding
chr17	30921932	30958220	30921932	30958220	+	ENST00000580525.5@ADAP2	ENST00000580525.5	protein_coding	30921932,30922940,30926809,30931889,30934185,30944907,30949287,30953288,30954478,30956241,30957835	30922108,30923070,30926918,30931968,30934297,30945053,30949370,30953350,30954555,30956469,30958220	Gene ID= ENSG00000184060.10 TPM= 2.34 Transcript Type= protein_coding
chr17	30966664	30969259	30966664	30969259	-	transcript2868.chr17.nnic@NA	transcript2868.chr17.nnic	NA	30966664	30969259	Gene ID= novel_gene_chr17_2869 TPM= 2.34 Transcript Type= NA
chr17	30970201	30999911	30970201	30999911	+	ENST00000328381.9@RNF135	ENST00000328381.9	protein_coding	30970201,30984617,30987944,30997242,30998662	30971445,30984760,30988106,30997331,30999911	Gene ID= ENSG00000181481.13 TPM= 40.87 Transcript Type= protein_coding
chr17	30971020	30999911	30971020	30999911	+	transcript2857.chr17.nnic@RNF135	transcript2857.chr17.nnic	protein_coding	30971020,30984617,30987986,30997242,30998662	30971445,30984760,30988106,30997331,30999911	Gene ID= ENSG00000181481.13 TPM= 2.34 Transcript Type= NA
chr17	30971048	30999911	30971048	30999911	+	transcript2859.chr17.nnic@RNF135	transcript2859.chr17.nnic	protein_coding	30971048,30984617,30987944,30997242,30998662	30971746,30984760,30988106,30997331,30999911	Gene ID= ENSG00000181481.13 TPM= 2.34 Transcript Type= NA
chr17	30971023	30999909	30971023	30999909	+	ENST00000324689.8@RNF135	ENST00000324689.8	protein_coding	30971023,30984617,30997242,30998662	30971445,30984760,30997331,30999909	Gene ID= ENSG00000181481.13 TPM= 15.18 Transcript Type= protein_coding
chr17	30971054	30999911	30971054	30999911	+	transcript2863.chr17.nic@RNF135	transcript2863.chr17.nic	protein_coding	30971054,30987944,30997242,30998662	30971445,30988106,30997331,30999911	Gene ID= ENSG00000181481.13 TPM= 2.34 Transcript Type= NA
chr17	30971060	30999911	30971060	30999911	+	ENST00000535306.6@RNF135	ENST00000535306.6	protein_coding	30971060,30984617,30987944,30993840,30997242,30998662	30971445,30984760,30988106,30993904,30997331,30999911	Gene ID= ENSG00000181481.13 TPM= 12.84 Transcript Type= protein_coding
chr17	31008569	31035654	31008569	31035654	+	transcript2870.chr17.nnic@AC138207.8	transcript2870.chr17.nnic	transcribed_unprocessed_pseudogene	31008569,31021049,31021910,31023606,31024366,31031560,31032426,31033295,31033924	31008803,31021162,31022042,31023760,31024426,31031682,31032506,31033365,31035654	Gene ID= ENSG00000266865.6 TPM= 4.67 Transcript Type= NA
chr17	31303766	31314112	31303766	31314112	-	ENST00000330927.4@EVI2B	ENST00000330927.4	protein_coding	31313979,31303766	31314112,31305630	Gene ID= ENSG00000185862.6 TPM= 36.2 Transcript Type= protein_coding
chr17	31317560	31321884	31317560	31321884	-	ENST00000462804.2@EVI2A	ENST00000462804.2	protein_coding	31321495,31317560	31321884,31319023	Gene ID= ENSG00000126860.11 TPM= 1.17 Transcript Type= protein_coding
chr17	31851864	31859337	31851864	31859337	-	ENST00000302362.10@COPRS	ENST00000302362.10	protein_coding	31859101,31856799,31852812,31851864	31859337,31856865,31853030,31852308	Gene ID= ENSG00000172301.10 TPM= 56.04 Transcript Type= protein_coding
chr17	31863173	31901756	31863173	31901756	-	transcript2901.chr17.nic@UTP6	transcript2901.chr17.nic	protein_coding	31901536,31899646,31894970,31894645,31892747,31892260,31889285,31887236,31885980,31884424,31880573,31878702,31878250,31875234,31873673,31873378,31868046,31866655,31865366,31863173	31901756,31899730,31895011,31894737,31892794,31892323,31889403,31887313,31886061,31884505,31880754,31878781,31878327,31875413,31873753,31873487,31868112,31866715,31865438,31863516	Gene ID= ENSG00000108651.9 TPM= 8.17 Transcript Type= NA
chr17	31860899	31901765	31860899	31901765	-	ENST00000261708.8@UTP6	ENST00000261708.8	protein_coding	31901536,31899646,31894970,31894645,31892747,31892260,31889285,31887236,31885980,31884424,31880573,31878702,31878250,31875234,31873673,31873378,31868046,31865366,31860899	31901765,31899730,31895011,31894737,31892794,31892323,31889403,31887313,31886061,31884505,31880754,31878781,31878327,31875413,31873753,31873487,31868112,31865438,31863516	Gene ID= ENSG00000108651.9 TPM= 59.55 Transcript Type= protein_coding
chr17	31863173	31901756	31863173	31901756	-	transcript2906.chr17.nnic@UTP6	transcript2906.chr17.nnic	protein_coding	31901536,31899646,31894970,31894645,31892747,31892260,31889285,31887236,31885980,31880573,31878702,31878250,31875234,31873673,31873378,31868046,31865366,31863173	31901756,31899730,31895011,31894737,31892794,31892323,31889403,31887313,31886061,31880754,31878781,31878327,31875413,31873753,31873487,31868112,31865438,31863516	Gene ID= ENSG00000108651.9 TPM= 2.34 Transcript Type= NA
chr17	31863173	31901756	31863173	31901756	-	transcript2911.chr17.nic@UTP6	transcript2911.chr17.nic	protein_coding	31901536,31899646,31894970,31894645,31892747,31892260,31889285,31887236,31885980,31884424,31878250,31875234,31873673,31873378,31868046,31865366,31863173	31901756,31899730,31895011,31894737,31892794,31892323,31889403,31887313,31886061,31884505,31880754,31875413,31873753,31873487,31868112,31865438,31863516	Gene ID= ENSG00000108651.9 TPM= 5.84 Transcript Type= NA
chr17	31937018	32001045	31937018	32001045	+	ENST00000322652.9@SUZ12	ENST00000322652.9	protein_coding	31937018,31940286,31940422,31947617,31966147,31973146,31975482,31976521,31982999,31988320,31993242,31993865,31994564,31995564,31996798,31998658	31937520,31940332,31940486,31947685,31966196,31973231,31975713,31976614,31983104,31988497,31993333,31994008,31994721,31995762,31996877,32001045	Gene ID= ENSG00000178691.10 TPM= 33.28 Transcript Type= protein_coding
chr17	31937067	32000649	31937067	32000649	+	ENST00000580398.1@SUZ12	ENST00000580398.1	protein_coding	31937067,31940286,31940422,31966147,31973146,31975482,31976521,31982999,31988320,31993242,31993865,31994564,31995564,31996798,31998658	31937520,31940332,31940486,31966196,31973231,31975713,31976614,31983104,31988497,31993333,31994008,31994721,31995762,31996877,32000649	Gene ID= ENSG00000178691.10 TPM= 1.75 Transcript Type= protein_coding
chr17	32007383	32053498	32007383	32053498	+	transcript2932.chr17.nic@LRRC37B	transcript2932.chr17.nic	protein_coding	32007383,32020697,32021393,32024711,32027769,32030656,32031378,32034910,32035565,32045700,32047761,32049102,32050003,32053266	32008132,32020803,32022825,32024782,32027840,32030727,32031458,32034981,32035639,32045818,32047901,32049394,32050107,32053498	Gene ID= ENSG00000185158.12 TPM= 3.5 Transcript Type= NA
chr17	32141973	32143211	32141973	32143211	-	transcript2957.chr17.nnic@AC116407.1	transcript2957.chr17.nnic	antisense_RNA	32143114,32141973	32143211,32142713	Gene ID= ENSG00000214708.4 TPM= 2.34 Transcript Type= NA
chr17	32142466	32225727	32142466	32225727	+	ENST00000358365.7@RHOT1	ENST00000358365.7	protein_coding	32142466,32171043,32173831,32175319,32175962,32176161,32182757,32183171,32192201,32193136,32193987,32198947,32199405,32200956,32202770,32203890,32206910,32208107,32209350,32211116,32224616	32142729,32171101,32173912,32175362,32176015,32176213,32182865,32183272,32192299,32193244,32194107,32199031,32199550,32201056,32202900,32203973,32207029,32208309,32209445,32211238,32225727	Gene ID= ENSG00000126858.16 TPM= 4.67 Transcript Type= protein_coding
chr17	32142454	32225770	32142454	32225770	+	ENST00000333942.10@RHOT1	ENST00000333942.10	protein_coding	32142454,32171043,32173831,32175319,32175962,32176161,32182757,32183171,32192201,32193136,32193987,32198947,32199405,32200956,32202770,32203890,32206910,32208107,32224616	32142729,32171101,32173912,32175362,32176015,32176213,32182865,32183272,32192299,32193244,32194107,32199031,32199550,32201056,32202900,32203973,32207029,32208309,32225770	Gene ID= ENSG00000126858.16 TPM= 23.35 Transcript Type= protein_coding
chr17	32142560	32225666	32142560	32225666	+	ENST00000354266.7@RHOT1	ENST00000354266.7	protein_coding	32142560,32171047,32173831,32175319,32175962,32176161,32182757,32183171,32192201,32193136,32193987,32198947,32199405,32200956,32202770,32203890,32206910,32208107,32224616	32142729,32171101,32173912,32175362,32176015,32176213,32182865,32183272,32192299,32193244,32194107,32199031,32199550,32201056,32202900,32203973,32207029,32208309,32225666	Gene ID= ENSG00000126858.16 TPM= 3.5 Transcript Type= protein_coding
chr17	32159620	32163736	32159620	32163736	+	transcript2959.chr17.nnic@NA	transcript2959.chr17.nnic	NA	32159620	32163736	Gene ID= novel_gene_chr17_2960 TPM= 3.5 Transcript Type= NA
chr17	32331362	32342189	32331362	32342189	-	ENST00000577809.5@C17orf75	ENST00000577809.5	protein_coding	32342000,32341204,32339813,32338208,32337897,32335323,32334775,32334469,32333417,32331362	32342189,32341284,32339938,32338351,32337954,32335442,32334839,32334605,32333520,32331978	Gene ID= ENSG00000108666.9 TPM= 2.34 Transcript Type= protein_coding
chr17	32350125	32380981	32350125	32380981	+	transcript2970.chr17.nnic@ZNF207	transcript2970.chr17.nnic	protein_coding	32350125,32351786,32358503,32360598,32360892,32361468,32362914,32365330,32366665,32367772,32369295,32369599,32373399,32377915	32350326,32351912,32358641,32360765,32360967,32361515,32362984,32365487,32366757,32368014,32369454,32369782,32373453,32380981	Gene ID= ENSG00000010244.18 TPM= 4.76 Transcript Type= NA
chr17	32350117	32381886	32350117	32381886	+	ENST00000394670.8@ZNF207	ENST00000394670.8	protein_coding	32350117,32351786,32358503,32360598,32360892,32361468,32362914,32365330,32366665,32367772,32369295,32369599	32350326,32351912,32358641,32360765,32360967,32361515,32362984,32365487,32366757,32368014,32369454,32381886	Gene ID= ENSG00000010244.18 TPM= 28.12 Transcript Type= protein_coding
chr17	32350125	32370343	32350125	32370343	+	transcript2984.chr17.nic@ZNF207	transcript2984.chr17.nic	protein_coding	32350125,32351786,32358503,32360598,32360892,32362914,32365330,32367772,32369295,32369599	32350326,32351912,32358641,32360765,32360967,32362984,32365487,32368014,32369454,32370343	Gene ID= ENSG00000010244.18 TPM= 2.63 Transcript Type= NA
chr17	32350180	32367656	32350180	32367656	+	transcript2985.chr17.nic@ZNF207	transcript2985.chr17.nic	protein_coding	32350180,32351786,32358503,32360598,32360892,32365330	32350326,32351912,32358641,32360765,32362984,32367656	Gene ID= ENSG00000010244.18 TPM= 11.68 Transcript Type= NA
chr17	32350138	32370343	32350138	32370343	+	ENST00000394673.6@ZNF207	ENST00000394673.6	protein_coding	32350138,32351786,32358503,32360598,32360892,32361468,32362914,32365330,32367772,32369295,32369599	32350326,32351912,32358641,32360765,32360967,32361515,32362984,32365487,32368014,32369454,32370343	Gene ID= ENSG00000010244.18 TPM= 13.52 Transcript Type= protein_coding
chr17	32444261	32483318	32444261	32483318	+	ENST00000261712.7@PSMD11	ENST00000261712.7	protein_coding	32444261,32446945,32454495,32464049,32464521,32468999,32473801,32474764,32477521,32479251,32479851,32480146,32480489,32480753	32444614,32447046,32454619,32464120,32464578,32469193,32473945,32474824,32477583,32479376,32479886,32480197,32480631,32483318	Gene ID= ENSG00000108671.9 TPM= 113.84 Transcript Type= protein_coding
chr17	32486619	32491256	32486619	32491256	+	ENST00000313401.3@CDK5R1	ENST00000313401.3	protein_coding	32486619,32487476	32487162,32491256	Gene ID= ENSG00000176749.8 TPM= 2.34 Transcript Type= protein_coding
chr17	32492522	32877177	32492522	32877177	-	ENST00000318217.9@MYO1D	ENST00000318217.9	protein_coding	32876778,32780576,32778480,32775864,32772789,32771125,32767636,32764878,32760482,32760290,32755492,32748936,32745211,32738253,32721023,32711988,32659115,32654477,32653843,32638722,32605087,32492522	32877177,32780784,32778573,32776029,32772842,32771220,32767752,32765081,32760627,32760404,32755662,32749006,32745285,32738385,32721189,32712195,32659338,32654621,32653947,32638835,32605241,32494915	Gene ID= ENSG00000176658.16 TPM= 28.02 Transcript Type= protein_coding
chr17	32603522	32877117	32603522	32877117	-	transcript3006.chr17.nic@MYO1D	transcript3006.chr17.nic	protein_coding	32876778,32780576,32778480,32775864,32772789,32771125,32767636,32764878,32760482,32760290,32755492,32748936,32745211,32738253,32721023,32711988,32659115,32654477,32653843,32638722,32603522	32877117,32780784,32778573,32776029,32772842,32771220,32767752,32765081,32760627,32760404,32755662,32749006,32745285,32738385,32721189,32712195,32659338,32654621,32653947,32638835,32605241	Gene ID= ENSG00000176658.16 TPM= 5.84 Transcript Type= NA
chr17	32927848	32941649	32927848	32941649	+	transcript3011.chr17.nnic@TMEM98	transcript3011.chr17.nnic	protein_coding	32927848,32931327,32931475,32933174,32934291,32936332,32939477,32940786	32928237,32931402,32931659,32933305,32934324,32936447,32939548,32941649	Gene ID= ENSG00000006042.11 TPM= 4.67 Transcript Type= NA
chr17	32927910	32941613	32927910	32941613	+	ENST00000394642.7@TMEM98	ENST00000394642.7	protein_coding	32927910,32931475,32933174,32934291,32936332,32939477,32940786	32928237,32931659,32933305,32934324,32936447,32939536,32941613	Gene ID= ENSG00000006042.11 TPM= 31.53 Transcript Type= protein_coding
chr17	33013087	33292988	33013087	33292988	-	ENST00000225823.6@ASIC2	ENST00000225823.6	protein_coding	33291408,33111917,33088863,33028242,33025926,33023861,33021219,33017605,33015971,33013087	33292988,33112067,33088990,33028392,33025982,33024014,33021310,33017684,33016039,33014066	Gene ID= ENSG00000108684.14 TPM= 2.34 Transcript Type= protein_coding
chr17	34255285	34257203	34255285	34257203	+	ENST00000225831.4@CCL2	ENST00000225831.4	protein_coding	34255285,34256222,34256722	34255425,34256339,34257203	Gene ID= ENSG00000108691.9 TPM= 35.03 Transcript Type= protein_coding
chr17	34255279	34257200	34255279	34257200	+	transcript3019.chr17.nnic@NA	transcript3019.chr17.nnic	NA	34255279	34257200	Gene ID= novel_gene_chr17_3020 TPM= 3.5 Transcript Type= NA
chr17	34319036	34321402	34319036	34321402	+	ENST00000394620.1@CCL8	ENST00000394620.1	protein_coding	34319036,34320269,34320802	34319577,34320386,34321402	Gene ID= ENSG00000108700.4 TPM= 2.34 Transcript Type= protein_coding
chr17	34356452	34358610	34356452	34358610	+	ENST00000225844.6@CCL13	ENST00000225844.6	protein_coding	34356452,34357475,34358026	34356602,34357589,34358610	Gene ID= ENSG00000181374.7 TPM= 2.34 Transcript Type= protein_coding
chr17	34961530	34963775	34961530	34963775	+	ENST00000361952.4@ZNF830	ENST00000361952.4	protein_coding	34961530	34963775	Gene ID= ENSG00000198783.5 TPM= 1.17 Transcript Type= protein_coding
chr17	34980512	35004805	34980512	35004805	+	transcript3030.chr17.nic@LIG3	transcript3030.chr17.nic	protein_coding	34980512,34983232,34985988,34989466,34990963,34991671,34991958,34992524,34994276,34996064,34996574,34997738,34998219,34998604,34999307,34999782,35001257,35001909,35002668,35004273	34980622,34983552,34986131,34989663,34991114,34991837,34992035,34992692,34994431,34996195,34996653,34997825,34998296,34998727,34999449,34999856,35001403,35002104,35002789,35004805	Gene ID= ENSG00000005156.11 TPM= 4.67 Transcript Type= NA
chr17	34980494	35009743	34980494	35009743	+	ENST00000378526.8@LIG3	ENST00000378526.8	protein_coding	34980494,34983002,34985988,34989466,34990963,34991671,34991958,34992524,34994276,34996064,34996574,34997738,34998219,34998604,34999307,34999782,35001257,35001909,35002668,35004273	34980622,34983552,34986131,34989663,34991114,34991837,34992035,34992692,34994431,34996195,34996653,34997825,34998296,34998727,34999449,34999856,35001403,35002104,35002789,35009743	Gene ID= ENSG00000005156.11 TPM= 3.5 Transcript Type= protein_coding
chr17	35009118	35089291	35009118	35089291	-	transcript3048.chr17.nnic@RFFL	transcript3048.chr17.nnic	protein_coding	35089105,35063576,35026374,35021371,35017523,35016370,35014740,35009118	35089291,35063850,35026561,35021781,35017606,35016580,35014763,35012149	Gene ID= ENSG00000092871.16 TPM= 9.92 Transcript Type= NA
chr17	35009118	35089284	35009118	35089284	-	transcript3052.chr17.nic@RFFL	transcript3052.chr17.nic	protein_coding	35089105,35026374,35017523,35016370,35014740,35009118	35089284,35026561,35017606,35016580,35014763,35012149	Gene ID= ENSG00000092871.16 TPM= 8.76 Transcript Type= NA
chr17	35092208	35119869	35092208	35119869	-	ENST00000345365.10@RAD51D	ENST00000345365.10	protein_coding	35119532,35119111,35118501,35107366,35106988,35106386,35103454,35103254,35101201,35092208	35119869,35119172,35118619,35107447,35107122,35106481,35103544,35103324,35101365,35101036	Gene ID= ENSG00000185379.20 TPM= 3.5 Transcript Type= protein_coding
chr17	35131347	35142315	35131347	35142315	-	ENST00000442241.8@NLE1	ENST00000442241.8	protein_coding	35142258,35141979,35139849,35139235,35137814,35137543,35137001,35136362,35136169,35135249,35133339,35133171,35131347	35142315,35142122,35140066,35139314,35137890,35137640,35137193,35136497,35136215,35135451,35133498,35133241,35132449	Gene ID= ENSG00000073536.17 TPM= 2.34 Transcript Type= protein_coding
chr17	35241323	35242900	35241323	35242900	-	transcript3067.chr17.nnic@NA	transcript3067.chr17.nnic	NA	35241323	35242900	Gene ID= novel_gene_chr17_3068 TPM= 4.67 Transcript Type= NA
chr17	35243036	35273655	35243036	35273655	+	ENST00000299977.8@SLFN5	ENST00000299977.8	protein_coding	35243036,35258651,35260971,35264183,35265072	35243143,35259702,35261096,35264903,35273655	Gene ID= ENSG00000166750.9 TPM= 17.51 Transcript Type= protein_coding
chr17	35243076	35245799	35243076	35245799	+	transcript3078.chr17.nnic@NA	transcript3078.chr17.nnic	NA	35243076	35245799	Gene ID= novel_gene_chr17_3079 TPM= 2.34 Transcript Type= NA
chr17	35350305	35373623	35350305	35373623	-	transcript3080.chr17.nic@SLFN11	transcript3080.chr17.nic	protein_coding	35373474,35367603,35366947,35362739,35360243,35353336,35350305	35373623,35367700,35367043,35363826,35360371,35354059,35353139	Gene ID= ENSG00000172716.16 TPM= 7.9 Transcript Type= NA
chr17	35350305	35373620	35350305	35373620	-	ENST00000394566.5@SLFN11	ENST00000394566.5	protein_coding	35373582,35367603,35366947,35362739,35360243,35353336,35350305	35373620,35367700,35367063,35363826,35360371,35354059,35353139	Gene ID= ENSG00000172716.16 TPM= 7.32 Transcript Type= protein_coding
chr17	35350305	35373621	35350305	35373621	-	transcript3088.chr17.nic@SLFN11	transcript3088.chr17.nic	protein_coding	35373474,35366947,35362739,35360243,35353336,35350305	35373621,35367063,35363826,35360371,35354059,35353139	Gene ID= ENSG00000172716.16 TPM= 10.24 Transcript Type= NA
chr17	35350305	35373607	35350305	35373607	-	ENST00000308377.8@SLFN11	ENST00000308377.8	protein_coding	35373474,35362739,35360243,35353336,35350305	35373607,35363826,35360371,35354059,35353139	Gene ID= ENSG00000172716.16 TPM= 9.07 Transcript Type= protein_coding
chr17	35409349	35433191	35409349	35433191	-	transcript3095.chr17.nic@SLFN12	transcript3095.chr17.nic	protein_coding	35432905,35432188,35421990,35420274,35409349	35433191,35432257,35423068,35420381,35411927	Gene ID= ENSG00000172123.12 TPM= 4.67 Transcript Type= NA
chr17	35587431	35724089	35587431	35724089	+	transcript3106.chr17.nic@AP2B1	transcript3106.chr17.nic	protein_coding	35587431,35594008,35598230,35605705,35608142,35624397,35626621,35627385,35627631,35636341,35639595,35641877,35650530,35657599,35670857,35671754,35674176,35682695,35709224,35710234,35717195,35723625	35587597,35594067,35598335,35605840,35608387,35624587,35626842,35627505,35627726,35636456,35639760,35641975,35650789,35657791,35670898,35671900,35674321,35682824,35709308,35710320,35717349,35724089	Gene ID= ENSG00000006125.17 TPM= 4.67 Transcript Type= NA
chr17	35587334	35724089	35587334	35724089	+	transcript3112.chr17.nic@AP2B1	transcript3112.chr17.nic	protein_coding	35587334,35594008,35598230,35605705,35608142,35624397,35626621,35627385,35627631,35636341,35639595,35641877,35650530,35657599,35671754,35674176,35682695,35709224,35710234,35717195,35723625	35587597,35594067,35598335,35605840,35608387,35624587,35626842,35627505,35627726,35636456,35639760,35641975,35650789,35657791,35671900,35674321,35682824,35709308,35710320,35717349,35724089	Gene ID= ENSG00000006125.17 TPM= 4.67 Transcript Type= NA
chr17	35587251	35660120	35587251	35660120	+	transcript3116.chr17.nic@AP2B1	transcript3116.chr17.nic	protein_coding	35587251,35594008,35598230,35605705,35608142,35624397,35626621,35627385,35627631,35636341,35639595,35641877,35650530,35657599,35659764	35587428,35594067,35598335,35605840,35608387,35624587,35626842,35627505,35627726,35636456,35639760,35641975,35650789,35657791,35660120	Gene ID= ENSG00000006125.17 TPM= 4.67 Transcript Type= NA
chr17	35587274	35726409	35587274	35726409	+	ENST00000621914.4@AP2B1	ENST00000621914.4	protein_coding	35587274,35594008,35598230,35605705,35608142,35624397,35626621,35627385,35627631,35636341,35639595,35641877,35650530,35657599,35671754,35674176,35682695,35709224,35710234,35717195,35723625	35587428,35594067,35598335,35605840,35608387,35624587,35626842,35627505,35627726,35636456,35639760,35641975,35650789,35657791,35671900,35674321,35682824,35709308,35710320,35717349,35726409	Gene ID= ENSG00000006125.17 TPM= 15.18 Transcript Type= protein_coding
chr17	35665128	35666788	35665128	35666788	-	transcript3120.chr17.nnic@NA	transcript3120.chr17.nnic	NA	35665128	35666788	Gene ID= novel_gene_chr17_3121 TPM= 3.5 Transcript Type= NA
chr17	35731649	35743521	35731649	35743521	+	ENST00000603017.1@RASL10B	ENST00000603017.1	protein_coding	35731649,35735038,35740409,35741035	35731878,35735400,35740533,35743521	Gene ID= ENSG00000270885.1 TPM= 12.84 Transcript Type= protein_coding
chr17	35765865	35795761	35765865	35795761	-	transcript3141.chr17.nic@MMP28	transcript3141.chr17.nic	protein_coding	35795267,35779244,35778888,35770067,35768230,35767752,35765865	35795761,35779323,35779075,35770312,35768379,35767919,35766894	Gene ID= ENSG00000271447.5 TPM= 19.07 Transcript Type= NA
chr17	35767062	35795652	35767062	35795652	-	transcript3146.chr17.nic@MMP28	transcript3146.chr17.nic	protein_coding	35795267,35779244,35778888,35773180,35770067,35768230,35767062	35795652,35779323,35779075,35773404,35770312,35768379,35767919	Gene ID= ENSG00000271447.5 TPM= 6.42 Transcript Type= NA
chr17	35766340	35795582	35766340	35795582	-	ENST00000605424.5@MMP28	ENST00000605424.5	protein_coding	35795267,35779244,35778888,35773180,35770067,35768230,35767752,35766340	35795582,35779323,35779075,35773404,35770312,35768379,35767919,35766894	Gene ID= ENSG00000271447.5 TPM= 17.51 Transcript Type= protein_coding
chr17	35778505	35795707	35778505	35795707	-	ENST00000612672.1@MMP28	ENST00000612672.1	protein_coding	35795267,35779244,35778505	35795707,35779323,35779075	Gene ID= ENSG00000271447.5 TPM= 32.69 Transcript Type= protein_coding
chr17	35840757	35843340	35840757	35843340	-	transcript3171.chr17.nnic@NA	transcript3171.chr17.nnic	NA	35840757	35843340	Gene ID= novel_gene_chr17_3172 TPM= 2.34 Transcript Type= NA
chr17	35871491	35880508	35871491	35880508	-	ENST00000603197.5@CCL5	ENST00000603197.5	protein_coding	35880230,35878528,35871491	35880508,35878639,35872464	Gene ID= ENSG00000271503.5 TPM= 35.03 Transcript Type= protein_coding
chr17	35983656	36001621	35983656	36001621	-	ENST00000616694.1@CCL15-CCL14	ENST00000616694.1	protein_coding	36001417,35998866,35998280,35997721,35986571,35984338,35983656	36001621,35998925,35998391,35997860,35986704,35984452,35983888	Gene ID= ENSG00000275688.4 TPM= 8.17 Transcript Type= nonsense_mediated_decay
chr17	35997582	36002038	35997582	36002038	-	ENST00000617897.1@CCL15	ENST00000617897.1	protein_coding	36001417,35998866,35998280,35997582	36002038,35998925,35998391,35997860	Gene ID= ENSG00000275718.1 TPM= 2.34 Transcript Type= protein_coding
chr17	36013058	36017968	36013058	36017968	-	ENST00000615050.1@CCL23	ENST00000615050.1	protein_coding	36017822,36014334,36013744,36013058	36017968,36014393,36013909,36013308	Gene ID= ENSG00000274736.4 TPM= 10.51 Transcript Type= protein_coding
chr17	36013056	36017962	36013056	36017962	-	ENST00000612516.4@CCL23	ENST00000612516.4	protein_coding	36017822,36014334,36013744,36013056	36017962,36014393,36013858,36013308	Gene ID= ENSG00000274736.4 TPM= 5.84 Transcript Type= protein_coding
chr17	36013057	36013781	36013057	36013781	-	ENST00000613876.1@CCL23	ENST00000613876.1	protein_coding	36013632,36013057	36013781,36013308	Gene ID= ENSG00000274736.4 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr17	36088256	36090141	36088256	36090141	-	ENST00000613922.1@CCL3	ENST00000613922.1	protein_coding	36089986,36089183,36088256	36090141,36089297,36088762	Gene ID= ENSG00000277632.1 TPM= 9.34 Transcript Type= protein_coding
chr17	36088256	36090169	36088256	36090169	-	ENST00000614051.1@CCL3	ENST00000614051.1	protein_coding	36089183,36088256	36090169,36088762	Gene ID= ENSG00000277632.1 TPM= 1.17 Transcript Type= retained_intron
chr17	36194869	36196758	36194869	36196758	-	ENST00000619989.1@CCL3L3	ENST00000619989.1	protein_coding	36196598,36195798,36194869	36196758,36195912,36195376	Gene ID= ENSG00000276085.1 TPM= 2.34 Transcript Type= protein_coding
chr17	36211063	36212878	36211063	36212878	+	ENST00000620250.1@CCL4L2	ENST00000620250.1	protein_coding	36211063,36211776,36212482	36211217,36211890,36212878	Gene ID= ENSG00000276070.4 TPM= 2.34 Transcript Type= protein_coding
chr17	36486635	36495822	36486635	36495822	+	ENST00000617429.4@ZNHIT3	ENST00000617429.4	protein_coding	36486635,36486935,36492813,36493926,36495223	36486785,36486966,36492899,36494006,36495822	Gene ID= ENSG00000273611.4 TPM= 10.51 Transcript Type= protein_coding
chr17	36486695	36498148	36486695	36498148	+	ENST00000620324.4@ZNHIT3	ENST00000620324.4	protein_coding	36486695,36486935,36492813,36493926,36497606	36486785,36486966,36492899,36494006,36498148	Gene ID= ENSG00000273611.4 TPM= 2.34 Transcript Type= protein_coding
chr17	36486629	36495823	36486629	36495823	+	ENST00000619730.4@ZNHIT3	ENST00000619730.4	protein_coding	36486629,36492813,36493926,36495223	36486785,36492899,36494006,36495823	Gene ID= ENSG00000273611.4 TPM= 1.17 Transcript Type= protein_coding
chr17	36535555	36539310	36535555	36539310	+	ENST00000620233.1@PIGW	ENST00000620233.1	protein_coding	36535555,36537094	36535601,36539310	Gene ID= ENSG00000277161.1 TPM= 4.67 Transcript Type= protein_coding
chr17	36544888	36589848	36544888	36589848	+	ENST00000613102.4@GGNBP2	ENST00000613102.4	protein_coding	36544888,36545619,36554820,36557083,36560773,36567663,36577983,36579245,36581344,36585300,36585840,36586050,36586997,36589208	36545097,36545817,36554900,36557336,36560871,36567776,36578186,36579419,36581538,36585450,36585965,36586198,36587245,36589848	Gene ID= ENSG00000278311.4 TPM= 21.02 Transcript Type= protein_coding
chr17	36545476	36589848	36545476	36589848	+	transcript3220.chr17.nic@GGNBP2	transcript3220.chr17.nic	protein_coding	36545476,36554820,36557083,36560773,36567663,36577983,36579245,36581344,36585300,36585840,36586050,36586997,36589208	36545817,36554900,36557336,36560871,36567776,36578186,36579419,36581538,36585450,36585965,36586198,36587245,36589848	Gene ID= ENSG00000278311.4 TPM= 10.51 Transcript Type= NA
chr17	36544912	36547747	36544912	36547747	+	ENST00000611219.1@GGNBP2	ENST00000611219.1	protein_coding	36544912,36545619	36545097,36547747	Gene ID= ENSG00000278311.4 TPM= 4.67 Transcript Type= protein_coding
chr17	36591798	36600806	36591798	36600806	+	ENST00000618403.4@DHRS11	ENST00000618403.4	protein_coding	36591798,36594971,36598163,36598921,36599671,36599972,36600162	36592156,36595180,36598257,36599050,36599763,36600037,36600806	Gene ID= ENSG00000278535.4 TPM= 8.17 Transcript Type= protein_coding
chr17	36601572	36608971	36601572	36608971	+	ENST00000614766.4@MRM1	ENST00000614766.4	protein_coding	36601572,36602553,36607670,36607899,36608243	36602352,36602646,36607802,36608018,36608971	Gene ID= ENSG00000278619.4 TPM= 1.17 Transcript Type= protein_coding
chr17	36948875	37056871	36948875	37056871	+	ENST00000619387.4@AATF	ENST00000619387.4	protein_coding	36948875,36950214,36952886,36953770,36986617,36988519,36989247,36990774,37019005,37020934,37031614,37056601	36949216,36950405,36953296,36953907,36986731,36988720,36989411,36990857,37019072,37021014,37031685,37056871	Gene ID= ENSG00000275700.4 TPM= 85.23 Transcript Type= protein_coding
chr17	36948939	37056869	36948939	37056869	+	transcript3240.chr17.nnic@AATF	transcript3240.chr17.nnic	protein_coding	36948939,36950214,36952886,36953770,36986617,36988519,36989247,36990774,37056601	36949216,36950405,36953296,36953907,36986731,36988720,36989411,36990857,37056869	Gene ID= ENSG00000275700.4 TPM= 2.34 Transcript Type= NA
chr17	37084994	37359116	37084994	37359116	-	ENST00000614428.4@ACACA	ENST00000614428.4	protein_coding	37358999,37339804,37330173,37284838,37283267,37277896,37277033,37275951,37274193,37270751,37263685,37259360,37258212,37257703,37252886,37252005,37248593,37248011,37246826,37245080,37244588,37243371,37241953,37240476,37234975,37226339,37224992,37223512,37221724,37210467,37207657,37206783,37205765,37200427,37200139,37193374,37192090,37191120,37188277,37181201,37179260,37161781,37155683,37151301,37149864,37130075,37129365,37125698,37122531,37121355,37113088,37111531,37097830,37096996,37088938,37084994	37359116,37339850,37330425,37284970,37283405,37278005,37277114,37276049,37274299,37270861,37263894,37259530,37258373,37257866,37253036,37252108,37248674,37248156,37246976,37245214,37244734,37243559,37242053,37240564,37235099,37226452,37225105,37223601,37221842,37210490,37207800,37206879,37205872,37200483,37200183,37193415,37192305,37191275,37188480,37181356,37179406,37162050,37155780,37151421,37149974,37130218,37129485,37125794,37122627,37121490,37113265,37111643,37097984,37097166,37089074,37087439	Gene ID= ENSG00000278540.4 TPM= 39.7 Transcript Type= protein_coding
chr17	37406874	37479730	37406874	37479730	+	ENST00000615182.4@TADA2A	ENST00000615182.4	protein_coding	37406874,37411269,37423509,37426950,37437738,37440505,37442564,37444696,37458524,37462078,37465431,37467454,37470400,37471094,37474556,37476797	37406949,37411390,37423615,37427009,37437829,37440662,37442652,37444768,37458587,37462121,37465541,37467525,37470532,37471137,37474629,37479730	Gene ID= ENSG00000276234.4 TPM= 1.17 Transcript Type= protein_coding
chr17	37446105	37449565	37446105	37449565	-	transcript3249.chr17.nnic@NA	transcript3249.chr17.nnic	NA	37446105	37449565	Gene ID= novel_gene_chr17_3250 TPM= 9.34 Transcript Type= NA
chr17	37489831	37513501	37489831	37513501	+	ENST00000617516.4@DUSP14	ENST00000617516.4	protein_coding	37489831,37510677,37512181	37489958,37510764,37513501	Gene ID= ENSG00000276023.4 TPM= 29.19 Transcript Type= protein_coding
chr17	37514797	37609496	37514797	37609496	-	ENST00000612223.4@SYNRG	ENST00000612223.4	protein_coding	37609279,37600363,37596223,37586419,37585325,37584648,37577380,37576341,37571791,37570637,37568791,37561471,37561195,37553115,37541972,37540380,37539192,37538324,37535979,37520538,37520179,37514797	37609496,37600403,37596344,37586549,37585430,37584759,37577613,37576418,37571987,37570885,37568924,37561589,37561257,37554059,37542565,37540543,37539245,37538420,37536127,37520648,37520214,37519071	Gene ID= ENSG00000275066.4 TPM= 3.79 Transcript Type= protein_coding
chr17	37518461	37609433	37518461	37609433	-	transcript3257.chr17.nic@SYNRG	transcript3257.chr17.nic	protein_coding	37609279,37600363,37596223,37586419,37585325,37584648,37577380,37576341,37571791,37570637,37568791,37561471,37561195,37553115,37541972,37540380,37539192,37538324,37535979,37520538,37520179,37518461	37609433,37600403,37596344,37586549,37585430,37584759,37577613,37576418,37571987,37570885,37568924,37561589,37561257,37554059,37542430,37540543,37539245,37538420,37536127,37520648,37520214,37519071	Gene ID= ENSG00000275066.4 TPM= 2.63 Transcript Type= NA
chr17	37518461	37609433	37518461	37609433	-	transcript3263.chr17.nic@SYNRG	transcript3263.chr17.nic	protein_coding	37609279,37600363,37596223,37586419,37585325,37584648,37577380,37576341,37571791,37570637,37568791,37561471,37561195,37553115,37541972,37540380,37539192,37538324,37535979,37520538,37518461	37609433,37600403,37596344,37586549,37585430,37584759,37577613,37576418,37571987,37570885,37568924,37561589,37561257,37554059,37542427,37540543,37539245,37538420,37536127,37520648,37519071	Gene ID= ENSG00000275066.4 TPM= 4.96 Transcript Type= NA
chr17	37518461	37609433	37518461	37609433	-	transcript3264.chr17.nic@SYNRG	transcript3264.chr17.nic	protein_coding	37609279,37600363,37596223,37586419,37585325,37584648,37577380,37576341,37571791,37570637,37568791,37561471,37561195,37553115,37541972,37540380,37539192,37538324,37535979,37520538,37518461	37609433,37600403,37596344,37586549,37585430,37584759,37577613,37576418,37571987,37570885,37568924,37561589,37561257,37554059,37542565,37540543,37539245,37538420,37536127,37520648,37519071	Gene ID= ENSG00000275066.4 TPM= 4.96 Transcript Type= NA
chr17	37609778	37643464	37609778	37643464	-	ENST00000617633.4@DDX52	ENST00000617633.4	protein_coding	37643334,37642110,37633288,37632113,37630030,37628561,37626788,37625895,37624344,37621398,37621127,37620873,37619768,37618292,37609778	37643464,37642308,37633418,37632298,37630173,37628672,37626860,37626098,37624434,37621520,37621277,37620948,37619839,37618384,37614353	Gene ID= ENSG00000278053.4 TPM= 2.34 Transcript Type= protein_coding
chr17	37686432	37745247	37686432	37745247	-	ENST00000617811.4@HNF1B	ENST00000617811.4	protein_coding	37744541,37739440,37733557,37731595,37710503,37704917,37700983,37699076,37686432	37745247,37739639,37733821,37731830,37710663,37705049,37701177,37699194,37687392	Gene ID= ENSG00000275410.4 TPM= 12.84 Transcript Type= protein_coding
chr17	37740988	37745036	37740988	37745036	-	transcript3282.chr17.nnic@NA	transcript3282.chr17.nnic	NA	37740988	37745036	Gene ID= novel_gene_chr17_3283 TPM= 2.34 Transcript Type= NA
chr17	38181659	38257110	38181659	38257110	-	transcript3301.chr17.nnic@TBC1D3	transcript3301.chr17.nnic	protein_coding	38256898,38242201,38219046,38209051,38205635,38202072,38201105,38197546,38196367,38195880,38190958,38190710,38189387,38188824,38188273,38187834,38186532,38185868,38185060,38184610,38184047,38183524,38181659	38257110,38242285,38219123,38209116,38205742,38202981,38201219,38197710,38196471,38195940,38191030,38190795,38189426,38188904,38188380,38187943,38186580,38185988,38185154,38184675,38184146,38183676,38182542	Gene ID= ENSG00000274611.3 TPM= 2.84 Transcript Type= NA
chr17	38181659	38257184	38181659	38257184	-	transcript3307.chr17.nnic@TBC1D3	transcript3307.chr17.nnic	protein_coding	38256898,38242201,38219046,38208995,38205635,38201105,38197546,38196367,38195880,38190958,38190710,38189387,38188824,38188273,38187834,38186532,38185868,38185060,38184610,38184047,38183524,38181659	38257184,38242285,38219123,38209116,38205742,38202981,38197710,38196471,38195940,38191030,38190795,38189609,38188904,38188380,38187943,38186580,38185988,38185154,38184675,38184146,38183676,38182542	Gene ID= ENSG00000274611.3 TPM= 4 Transcript Type= NA
chr17	38195740	38257381	38195740	38257381	-	transcript3315.chr17.nnic@AC244154.1	transcript3315.chr17.nnic	unprocessed_pseudogene	38256898,38242201,38219046,38208995,38205635,38202781,38202238,38202072,38201105,38197546,38196367,38195740	38257381,38242285,38219123,38209116,38205742,38202981,38202334,38202105,38201219,38197710,38196471,38195940	Gene ID= ENSG00000274487.1 TPM= 3.22 Transcript Type= NA
chr17	38195740	38257303	38195740	38257303	-	transcript3316.chr17.nic@AC244154.1	transcript3316.chr17.nic	unprocessed_pseudogene	38256898,38242201,38219046,38209051,38205635,38202072,38201105,38197546,38196367,38195740	38257303,38242285,38219123,38209116,38205742,38202981,38201219,38197710,38196471,38195940	Gene ID= ENSG00000274487.1 TPM= 3.22 Transcript Type= NA
chr17	38195740	38257157	38195740	38257157	-	transcript3319.chr17.nic@AC244154.1	transcript3319.chr17.nic	unprocessed_pseudogene	38256898,38242201,38219046,38209051,38205635,38201105,38197546,38196367,38195740	38257157,38242285,38219123,38209116,38205742,38202981,38197710,38196471,38195940	Gene ID= ENSG00000274487.1 TPM= 4 Transcript Type= NA
chr17	38197952	38257183	38197952	38257183	-	transcript3324.chr17.nic@AC244154.1	transcript3324.chr17.nic	unprocessed_pseudogene	38256898,38242201,38219046,38209051,38205635,38197952	38257183,38242285,38219123,38209116,38205742,38202981	Gene ID= ENSG00000274487.1 TPM= 4 Transcript Type= NA
chr17	38195740	38257152	38195740	38257152	-	ENST00000620148.1@AC244154.1	ENST00000620148.1	unprocessed_pseudogene	38256898,38242201,38219046,38209051,38205635,38202736,38202238,38202072,38201105,38197546,38196367,38195740	38257152,38242285,38219123,38209116,38205742,38202981,38202334,38202105,38201219,38197710,38196471,38195940	Gene ID= ENSG00000274487.1 TPM= 3.22 Transcript Type= unprocessed_pseudogene
chr17	38297023	38323218	38297023	38323218	+	ENST00000613675.4@MRPL45	ENST00000613675.4	protein_coding	38297023,38298449,38299351,38306533,38318687,38320618,38322126,38322509	38297249,38298626,38299468,38306631,38318735,38320767,38322299,38323218	Gene ID= ENSG00000278845.4 TPM= 50.21 Transcript Type= protein_coding
chr17	38297023	38323217	38297023	38323217	+	ENST00000619548.1@MRPL45	ENST00000619548.1	protein_coding	38297023,38298449,38299351,38306533,38318687,38322126,38322509	38297249,38298626,38299468,38306631,38318735,38322299,38323217	Gene ID= ENSG00000278845.4 TPM= 1.17 Transcript Type= protein_coding
chr17	38450394	38452399	38450394	38452399	-	ENST00000617990.4@AC244153.1	ENST00000617990.4	processed_transcript	38452318,38451626,38451306,38450394	38452399,38451827,38451393,38450723	Gene ID= ENSG00000276170.4 TPM= 1.17 Transcript Type= antisense_RNA
chr17	38453677	38512392	38453677	38512392	+	transcript3339.chr17.nic@ARHGAP23	transcript3339.chr17.nic	protein_coding	38453677,38458102,38460905,38462846,38463118,38463328,38466167,38469144,38469524,38469847,38471863,38477579,38479436,38479753,38482022,38482523,38486062,38490102,38490462,38491407,38497785,38498414,38500597,38509944	38454140,38458263,38460932,38462941,38463196,38463382,38467331,38469299,38469635,38469904,38472006,38477896,38479497,38479883,38482143,38482678,38486140,38490175,38490551,38491532,38497826,38498510,38500628,38512392	Gene ID= ENSG00000275832.4 TPM= 116.18 Transcript Type= NA
chr17	38453677	38512392	38453677	38512392	+	transcript3340.chr17.nic@ARHGAP23	transcript3340.chr17.nic	protein_coding	38453677,38458102,38460905,38462846,38463118,38463328,38466167,38469144,38469524,38469847,38471863,38477579,38479436,38479753,38482022,38482523,38486062,38490102,38490462,38491407,38497785,38500597,38509944	38454140,38458263,38460932,38462941,38463196,38463382,38467331,38469299,38469635,38469904,38472006,38477896,38479497,38479883,38482143,38482678,38486140,38490175,38490551,38491532,38497826,38500628,38512392	Gene ID= ENSG00000275832.4 TPM= 53.13 Transcript Type= NA
chr17	38462248	38466253	38462248	38466253	-	transcript3345.chr17.nnic@NA	transcript3345.chr17.nnic	NA	38463328,38463123,38462248	38466253,38463196,38462946	Gene ID= novel_gene_chr17_3346 TPM= 7.01 Transcript Type= NA
chr17	38671703	38675421	38671703	38675421	-	ENST00000621654.1@EPOP	ENST00000621654.1	protein_coding	38671703	38675421	Gene ID= ENSG00000273604.1 TPM= 9.34 Transcript Type= protein_coding
chr17	38681427	38706121	38681427	38706121	-	transcript3368.chr17.nnic@AC006449.2	transcript3368.chr17.nnic	antisense_RNA	38706054,38686794,38681427	38706121,38686901,38682122	Gene ID= ENSG00000275532.1 TPM= 3.5 Transcript Type= NA
chr17	38701633	38703535	38701633	38703535	+	transcript3370.chr17.nnic@NA	transcript3370.chr17.nnic	NA	38701633	38703535	Gene ID= novel_gene_chr17_3371 TPM= 4.67 Transcript Type= NA
chr17	38718583	38727192	38718583	38727192	+	ENST00000619356.1@MLLT6	ENST00000619356.1	protein_coding	38718583,38719750,38720372,38720659,38721878,38722678,38724620,38725557	38719583,38719895,38720569,38720747,38722227,38722768,38724976,38727192	Gene ID= ENSG00000275023.4 TPM= 43.2 Transcript Type= retained_intron
chr17	38730235	38735021	38730235	38735021	+	ENST00000613478.1@CISD3	ENST00000613478.1	protein_coding	38730235,38730760,38731320,38733276	38730406,38730795,38731439,38735021	Gene ID= ENSG00000277972.1 TPM= 8.17 Transcript Type= protein_coding
chr17	38730359	38735044	38730359	38735044	+	ENST00000619858.1@CISD3	ENST00000619858.1	protein_coding	38730359,38731320,38733276	38730795,38731439,38735044	Gene ID= ENSG00000277972.1 TPM= 5.84 Transcript Type= processed_transcript
chr17	38752736	38764231	38752736	38764231	+	ENST00000619426.4@PSMB3	ENST00000619426.4	protein_coding	38752736,38753150,38755883,38760431,38762411,38764119	38752829,38753334,38755990,38760608,38762505,38764231	Gene ID= ENSG00000277791.4 TPM= 64.22 Transcript Type= protein_coding
chr17	38765689	38799905	38765689	38799905	-	ENST00000619039.4@PIP4K2B	ENST00000619039.4	protein_coding	38799266,38786823,38784243,38780452,38779383,38778334,38777687,38771014,38770436,38765689	38799905,38786920,38784339,38780604,38779529,38778372,38777800,38771272,38770539,38769771	Gene ID= ENSG00000276293.4 TPM= 43.2 Transcript Type= protein_coding
chr17	38765689	38799591	38765689	38799591	-	transcript3380.chr17.nnic@PIP4K2B	transcript3380.chr17.nnic	protein_coding	38799266,38786823,38780452,38779383,38778334,38777687,38771014,38770436,38765689	38799591,38786920,38780604,38779529,38778372,38777800,38771272,38770539,38769771	Gene ID= ENSG00000276293.4 TPM= 22.18 Transcript Type= NA
chr17	38801471	38825345	38801471	38825345	-	transcript3385.chr17.nic@CWC25	transcript3385.chr17.nic	protein_coding	38825166,38820901,38814861,38812795,38810468,38810276,38809702,38806765,38806297,38802700,38801471	38825345,38821073,38815097,38812864,38810595,38810400,38809765,38806976,38806395,38802861,38802206	Gene ID= ENSG00000273559.4 TPM= 2.34 Transcript Type= NA
chr17	38800434	38825345	38800434	38825345	-	transcript3386.chr17.nic@CWC25	transcript3386.chr17.nic	protein_coding	38825166,38820901,38814861,38812795,38810276,38809702,38806765,38806297,38802700,38800434	38825345,38821073,38815097,38812864,38810595,38809765,38806976,38806395,38802861,38802206	Gene ID= ENSG00000273559.4 TPM= 3.5 Transcript Type= NA
chr17	38800434	38825481	38800434	38825481	-	ENST00000614790.4@CWC25	ENST00000614790.4	protein_coding	38825166,38820901,38814861,38812795,38810468,38809702,38806765,38806297,38802700,38800434	38825481,38821073,38815097,38812864,38810595,38809765,38806976,38806395,38802861,38802206	Gene ID= ENSG00000273559.4 TPM= 17.51 Transcript Type= protein_coding
chr17	38801471	38825345	38801471	38825345	-	transcript3393.chr17.nic@CWC25	transcript3393.chr17.nic	protein_coding	38825166,38820901,38814861,38812795,38810468,38809702,38806297,38802700,38801471	38825345,38821073,38815097,38812864,38810595,38809765,38806976,38802861,38802206	Gene ID= ENSG00000273559.4 TPM= 2.34 Transcript Type= NA
chr17	38847867	38853843	38847867	38853843	-	ENST00000479035.6@RPL23	ENST00000479035.6	protein_coding	38853698,38853022,38852604,38850362,38847867	38853843,38853105,38852732,38850475,38850214	Gene ID= ENSG00000125691.12 TPM= 88.74 Transcript Type= protein_coding
chr17	38869950	38921766	38869950	38921766	+	transcript3402.chr17.nnic@LASP1	transcript3402.chr17.nnic	protein_coding	38869950,38878086,38890420,38898412,38914325,38915043,38918605,38921214	38870258,38878180,38890504,38898519,38914475,38915146,38921106,38921766	Gene ID= ENSG00000002834.17 TPM= 32.89 Transcript Type= NA
chr17	38870143	38921761	38870143	38921761	+	ENST00000435347.7@LASP1	ENST00000435347.7	protein_coding	38870143,38878086,38890420,38898412,38914325,38915043,38918605,38920307	38870258,38878180,38890504,38898519,38914475,38915146,38919982,38921761	Gene ID= ENSG00000002834.17 TPM= 16.54 Transcript Type= protein_coding
chr17	39067130	39151603	39067130	39151603	-	transcript3417.chr17.nic@PLXDC1	transcript3417.chr17.nic	protein_coding	39151362,39139654,39109248,39108904,39108123,39107407,39105854,39087607,39083459,39079104,39077913,39069856,39067130	39151603,39139832,39109391,39108973,39108245,39107525,39105953,39087702,39083540,39079164,39078048,39070016,39067959	Gene ID= ENSG00000161381.13 TPM= 4.67 Transcript Type= NA
chr17	39067130	39153027	39067130	39153027	-	ENST00000578517.5@PLXDC1	ENST00000578517.5	protein_coding	39152924,39139654,39109248,39108904,39108123,39107407,39105854,39087607,39083459,39079104,39077913,39072450,39069856,39067130	39153027,39139832,39109391,39108973,39108245,39107525,39105953,39087702,39083540,39079528,39078048,39072485,39070016,39067959	Gene ID= ENSG00000161381.13 TPM= 1.17 Transcript Type= retained_intron
chr17	39173801	39197670	39173801	39197670	-	transcript3423.chr17.nic@CACNB1	transcript3423.chr17.nic	protein_coding	39197412,39194884,39193648,39191474,39187479,39186793,39186496,39184784,39184325,39184031,39183713,39177984,39177350,39173801	39197670,39194970,39193797,39192094,39187601,39186929,39186572,39184864,39184383,39184140,39183864,39178079,39177535,39175657	Gene ID= ENSG00000067191.15 TPM= 6.62 Transcript Type= NA
chr17	39173801	39197700	39173801	39197700	-	transcript3429.chr17.nnic@CACNB1	transcript3429.chr17.nnic	protein_coding	39197412,39194884,39191474,39187479,39186793,39186496,39184784,39184325,39184031,39183713,39177984,39177350,39173801	39197700,39194970,39192094,39187601,39186929,39186572,39184864,39184383,39184140,39183864,39178079,39177535,39175657	Gene ID= ENSG00000067191.15 TPM= 6.62 Transcript Type= NA
chr17	39173801	39179303	39173801	39179303	-	transcript3434.chr17.nic@CACNB1	transcript3434.chr17.nic	protein_coding	39177984,39177350,39173801	39179303,39177535,39175657	Gene ID= ENSG00000067191.15 TPM= 10.12 Transcript Type= NA
chr17	39200283	39204727	39200283	39204727	+	ENST00000225430.8@RPL19	ENST00000225430.8	protein_coding	39200283,39201213,39202317,39202989,39204077,39204525	39200349,39201319,39202439,39203109,39204187,39204727	Gene ID= ENSG00000108298.9 TPM= 665.33 Transcript Type= protein_coding
chr17	39200342	39204711	39200342	39204711	+	ENST00000579260.5@RPL19	ENST00000579260.5	protein_coding	39200342,39201213,39202317,39202989,39204077,39204525	39200743,39201319,39202439,39203109,39204187,39204711	Gene ID= ENSG00000108298.9 TPM= 9.73 Transcript Type= protein_coding
chr17	39200316	39204727	39200316	39204727	+	ENST00000579374.5@RPL19	ENST00000579374.5	protein_coding	39200316,39201222,39202317,39202989,39204077,39204525	39200349,39201319,39202439,39203109,39204187,39204727	Gene ID= ENSG00000108298.9 TPM= 16.15 Transcript Type= protein_coding
chr17	39210536	39225872	39210536	39225872	-	ENST00000333461.5@STAC2	ENST00000333461.5	protein_coding	39225413,39217867,39217076,39216810,39215118,39214951,39214791,39214233,39213507,39212995,39210536	39225872,39218173,39217173,39216900,39215230,39215023,39214861,39214330,39213558,39213132,39212396	Gene ID= ENSG00000141750.6 TPM= 1.17 Transcript Type= protein_coding
chr17	39252644	39401663	39252644	39401663	-	ENST00000264658.10@FBXL20	ENST00000264658.10	protein_coding	39401361,39343180,39303585,39301001,39298990,39297127,39285478,39282729,39281389,39274970,39270796,39268827,39265397,39264175,39252644	39401663,39343241,39303639,39301075,39299084,39297195,39285573,39282855,39281463,39275100,39270856,39268871,39265453,39264387,39261567	Gene ID= ENSG00000108306.11 TPM= 65.39 Transcript Type= protein_coding
chr17	39340998	39401662	39340998	39401662	-	transcript3450.chr17.nic@FBXL20	transcript3450.chr17.nic	protein_coding	39401361,39340998	39401662,39343241	Gene ID= ENSG00000108306.11 TPM= 2.34 Transcript Type= NA
chr17	39527777	39534028	39527777	39534028	+	transcript3452.chr17.nnic@NA	transcript3452.chr17.nnic	NA	39527777	39534028	Gene ID= novel_gene_chr17_3453 TPM= 5.84 Transcript Type= NA
chr17	39559604	39562513	39559604	39562513	-	transcript3456.chr17.nnic@NA	transcript3456.chr17.nnic	NA	39559604	39562513	Gene ID= novel_gene_chr17_3457 TPM= 2.34 Transcript Type= NA
chr17	39629369	39636624	39629369	39636624	+	transcript3492.chr17.nic@PPP1R1B	transcript3492.chr17.nic	protein_coding	39629369,39629972,39633883,39635607,39635816	39629562,39630047,39634086,39635726,39636624	Gene ID= ENSG00000131771.13 TPM= 3.5 Transcript Type= NA
chr17	39626924	39636626	39626924	39636626	+	ENST00000254079.8@PPP1R1B	ENST00000254079.8	protein_coding	39626924,39629170,39629540,39629972,39633883,39635607,39635816	39627473,39629230,39629562,39630047,39634086,39635726,39636626	Gene ID= ENSG00000131771.13 TPM= 21.02 Transcript Type= protein_coding
chr17	39637123	39663484	39637123	39663484	+	transcript3462.chr17.nic@STARD3	transcript3462.chr17.nic	protein_coding	39637123,39653481,39657008,39657775,39657973,39658405,39658722,39659051,39659461,39660211,39660431,39660810,39660981,39662251,39662804	39637231,39653750,39657085,39657839,39658026,39658522,39658820,39659106,39659553,39660273,39660526,39660889,39661085,39662344,39663484	Gene ID= ENSG00000131748.15 TPM= 14.5 Transcript Type= NA
chr17	39637047	39663484	39637047	39663484	+	transcript3474.chr17.nic@STARD3	transcript3474.chr17.nic	protein_coding	39637047,39653481,39657008,39657775,39657973,39658405,39659051,39659461,39660211,39660431,39660810,39660981,39662251,39662804	39637231,39653750,39657085,39657852,39658026,39658522,39659106,39659553,39660273,39660526,39660889,39661085,39662344,39663484	Gene ID= ENSG00000131748.15 TPM= 16.05 Transcript Type= NA
chr17	39637047	39663484	39637047	39663484	+	transcript3475.chr17.nic@STARD3	transcript3475.chr17.nic	protein_coding	39637047,39653481,39657008,39657775,39657973,39658405,39659051,39659461,39660211,39660431,39660810,39660981,39662251,39662804	39637231,39653750,39657085,39657852,39658026,39658820,39659106,39659553,39660273,39660526,39660889,39661085,39662344,39663484	Gene ID= ENSG00000131748.15 TPM= 10.22 Transcript Type= NA
chr17	39637110	39663484	39637110	39663484	+	transcript3481.chr17.nic@STARD3	transcript3481.chr17.nic	protein_coding	39637110,39653481,39657008,39657775,39657973,39659051,39659461,39660211,39660431,39660810,39660981,39662251,39662804	39637231,39653750,39657085,39657852,39658820,39659106,39659553,39660273,39660526,39660889,39661085,39662344,39663484	Gene ID= ENSG00000131748.15 TPM= 6.71 Transcript Type= NA
chr17	39656841	39663484	39656841	39663484	+	transcript3485.chr17.nic@STARD3	transcript3485.chr17.nic	protein_coding	39656841,39657775,39657973,39658405,39658722,39659051,39659461,39660211,39660431,39660810,39660981,39662251,39662804	39657085,39657852,39658026,39658522,39658820,39659106,39659553,39660273,39660526,39660889,39661085,39662344,39663484	Gene ID= ENSG00000131748.15 TPM= 7.5 Transcript Type= NA
chr17	39637153	39663484	39637153	39663484	+	ENST00000580611.5@STARD3	ENST00000580611.5	protein_coding	39637153,39653481,39657775,39657973,39658405,39658722,39659051,39659461,39660211,39660431,39660810,39660981,39662251,39662804	39637231,39653750,39657852,39658026,39658522,39658820,39659106,39659553,39660273,39660526,39660889,39661085,39662367,39663484	Gene ID= ENSG00000131748.15 TPM= 1.69 Transcript Type= protein_coding
chr17	39637065	39663484	39637065	39663484	+	ENST00000336308.9@STARD3	ENST00000336308.9	protein_coding	39637065,39653481,39657008,39657775,39657973,39658405,39658722,39659051,39659461,39660211,39660431,39660810,39660981,39662251,39662804	39637231,39653750,39657085,39657852,39658026,39658522,39658820,39659106,39659553,39660273,39660526,39660889,39661085,39662344,39663484	Gene ID= ENSG00000131748.15 TPM= 90.4 Transcript Type= protein_coding
chr17	39637144	39663434	39637144	39663434	+	ENST00000394250.8@STARD3	ENST00000394250.8	protein_coding	39637144,39653481,39657008,39657775,39658405,39658722,39659051,39659461,39660211,39660431,39660810,39660981,39662251,39662804	39637231,39653750,39657085,39657852,39658522,39658820,39659106,39659553,39660273,39660526,39660889,39661085,39662344,39663434	Gene ID= ENSG00000131748.15 TPM= 1.17 Transcript Type= protein_coding
chr17	39661019	39664199	39661019	39664199	+	transcript3495.chr17.nnic@NA	transcript3495.chr17.nnic	NA	39661019	39664199	Gene ID= novel_gene_chr17_3496 TPM= 5.84 Transcript Type= NA
chr17	39663826	39666547	39663826	39666547	+	transcript3497.chr17.nnic@NA	transcript3497.chr17.nnic	NA	39663826	39666547	Gene ID= novel_gene_chr17_3498 TPM= 8.17 Transcript Type= NA
chr17	39668158	39670475	39668158	39670475	+	ENST00000269582.2@PNMT	ENST00000269582.2	protein_coding	39668158,39669629,39669951	39668677,39669836,39670475	Gene ID= ENSG00000141744.3 TPM= 4.67 Transcript Type= protein_coding
chr17	39671122	39688107	39671122	39688107	-	ENST00000300658.8@PGAP3	ENST00000300658.8	protein_coding	39687834,39685922,39684597,39674617,39673993,39673514,39673051,39671122	39688107,39686019,39684749,39674679,39674054,39673650,39673255,39672866	Gene ID= ENSG00000161395.13 TPM= 33.57 Transcript Type= protein_coding
chr17	39671122	39688043	39671122	39688043	-	transcript3503.chr17.nic@PGAP3	transcript3503.chr17.nic	protein_coding	39687834,39685922,39684597,39676614,39674617,39673514,39673051,39671122	39688043,39686019,39684749,39676755,39674679,39674054,39673255,39672866	Gene ID= ENSG00000161395.13 TPM= 16.05 Transcript Type= NA
chr17	39671123	39688057	39671123	39688057	-	ENST00000309862.10@PGAP3	ENST00000309862.10	protein_coding	39687834,39685922,39684597,39674617,39673514,39673051,39671123	39688057,39686019,39684749,39674679,39674054,39673255,39672866	Gene ID= ENSG00000161395.13 TPM= 7.88 Transcript Type= retained_intron
chr17	39671122	39688057	39671122	39688057	-	ENST00000579146.5@PGAP3	ENST00000579146.5	protein_coding	39687834,39685922,39684597,39671122	39688057,39686019,39684749,39672866	Gene ID= ENSG00000161395.13 TPM= 3.21 Transcript Type= protein_coding
chr17	39700080	39728662	39700080	39728662	+	ENST00000269571.9@ERBB2	ENST00000269571.9	protein_coding	39700080,39706990,39708321,39709318,39709813,39710086,39710340,39711928,39712322,39715286,39715446,39715740,39716301,39716515,39717320,39719787,39723319,39723538,39723912,39724726,39725049,39725327,39725707,39726562,39726815,39727295,39727689	39700311,39707141,39708534,39709452,39709881,39710201,39710481,39712047,39712448,39715359,39715536,39715939,39716433,39716605,39717480,39719834,39723457,39723660,39724010,39724911,39725204,39725402,39725853,39726659,39727003,39727547,39728662	Gene ID= ENSG00000141736.13 TPM= 75.89 Transcript Type= protein_coding
chr17	39700080	39728577	39700080	39728577	+	ENST00000578373.5@ERBB2	ENST00000578373.5	protein_coding	39700080,39706990,39708321,39709318,39709813,39710086,39710340,39711928,39712322,39715286,39715446,39715740,39716301,39716515,39717320,39719787,39723319,39723538,39723912,39724726,39725049,39725327,39725707,39726562,39726815,39727295,39727689	39700311,39707204,39708534,39709452,39709881,39710201,39710481,39712047,39712448,39715359,39715536,39715939,39716433,39716605,39717480,39719834,39723457,39723660,39724010,39724911,39725204,39725402,39725853,39726659,39727003,39727547,39728577	Gene ID= ENSG00000141736.13 TPM= 66.55 Transcript Type= nonsense_mediated_decay
chr17	39729156	39730787	39729156	39730787	-	ENST00000394231.7@MIEN1	ENST00000394231.7	protein_coding	39730407,39730194,39729685,39729156	39730787,39730291,39729761,39729605	Gene ID= ENSG00000141741.11 TPM= 49.42 Transcript Type= protein_coding
chr17	39729160	39730516	39729160	39730516	-	ENST00000498164.2@MIEN1	ENST00000498164.2	protein_coding	39730194,39729160	39730516,39729761	Gene ID= ENSG00000141741.11 TPM= 2.72 Transcript Type= retained_intron
chr17	39729156	39730491	39729156	39730491	-	ENST00000469568.5@MIEN1	ENST00000469568.5	protein_coding	39730194,39729685,39729156	39730491,39729761,39729605	Gene ID= ENSG00000141741.11 TPM= 6.22 Transcript Type= retained_intron
chr17	39737927	39747284	39737927	39747284	+	ENST00000309156.8@GRB7	ENST00000309156.8	protein_coding	39737927,39742252,39742566,39742898,39743180,39743393,39744070,39744553,39744886,39745243,39745422,39745728,39745913,39746109,39746751	39738133,39742456,39742716,39743054,39743301,39743470,39744207,39744663,39744984,39745323,39745538,39745788,39746000,39746202,39747284	Gene ID= ENSG00000141738.13 TPM= 15.18 Transcript Type= protein_coding
chr17	39738318	39747285	39738318	39747285	+	transcript3534.chr17.nic@GRB7	transcript3534.chr17.nic	protein_coding	39738318,39742252,39742566,39742898,39743180,39743393,39744070,39744553,39744886,39745243,39745422,39745728,39746109,39746751	39738392,39742456,39742716,39743054,39743301,39743470,39744207,39744663,39744984,39745323,39745538,39745788,39746202,39747285	Gene ID= ENSG00000141738.13 TPM= 3.5 Transcript Type= NA
chr17	39738318	39747285	39738318	39747285	+	transcript3537.chr17.nic@GRB7	transcript3537.chr17.nic	protein_coding	39738318,39742252,39742566,39743180,39743393,39744070,39744553,39744886,39745243,39745422,39745728,39746109,39746751	39738392,39742456,39743054,39743301,39743470,39744207,39744663,39744984,39745323,39745538,39745788,39746202,39747285	Gene ID= ENSG00000141738.13 TPM= 3.5 Transcript Type= NA
chr17	39738337	39747285	39738337	39747285	+	ENST00000394211.7@GRB7	ENST00000394211.7	protein_coding	39738337,39742252,39742566,39742898,39743180,39743393,39744070,39744553,39744886,39745243,39745422,39745728,39745913,39746109,39746751	39738392,39742456,39742716,39743054,39743301,39743470,39744207,39744663,39744984,39745323,39745538,39745788,39746000,39746202,39747285	Gene ID= ENSG00000141738.13 TPM= 18.68 Transcript Type= protein_coding
chr17	39921041	39927601	39921041	39927601	-	ENST00000579695.5@ORMDL3	ENST00000579695.5	protein_coding	39927484,39924030,39923112,39921041	39927601,39924220,39923263,39922685	Gene ID= ENSG00000172057.9 TPM= 5.25 Transcript Type= protein_coding
chr17	39921041	39927601	39921041	39927601	-	ENST00000304046.6@ORMDL3	ENST00000304046.6	protein_coding	39927484,39924030,39923112,39921041	39927601,39924225,39923263,39922685	Gene ID= ENSG00000172057.9 TPM= 7.59 Transcript Type= protein_coding
chr17	39980797	39997960	39980797	39997960	+	ENST00000264639.8@PSMD3	ENST00000264639.8	protein_coding	39980797,39984294,39986575,39988683,39989739,39990094,39994954,39995176,39995424,39996183,39997330,39997504	39981190,39984484,39986712,39988819,39989929,39990197,39995068,39995295,39995527,39996338,39997380,39997960	Gene ID= ENSG00000108344.14 TPM= 136.02 Transcript Type= protein_coding
chr17	40019102	40054416	40019102	40054416	-	transcript3560.chr17.nic@MED24	transcript3560.chr17.nic	protein_coding	40054361,40053469,40053298,40036116,40035722,40035117,40034916,40033345,40033056,40032649,40032043,40031538,40031159,40029748,40028826,40027909,40027383,40026856,40026647,40026156,40023131,40022645,40022394,40021955,40020273,40019785,40019102	40054416,40053635,40053380,40036154,40035795,40035349,40034972,40033456,40033206,40032762,40032090,40031620,40031245,40029859,40028968,40027946,40027465,40027034,40026746,40026331,40023395,40022826,40022484,40022054,40020353,40019933,40019645	Gene ID= ENSG00000008838.19 TPM= 8.15 Transcript Type= NA
chr17	40019102	40054416	40019102	40054416	-	transcript3569.chr17.nic@MED24	transcript3569.chr17.nic	protein_coding	40054361,40053469,40053298,40036116,40035722,40035117,40033345,40033056,40032649,40032043,40031538,40031159,40029748,40028826,40027909,40027383,40026856,40026647,40026156,40023131,40022645,40022394,40021955,40020273,40019785,40019102	40054416,40053657,40053380,40036154,40035795,40035349,40033456,40033206,40032762,40032090,40031620,40031245,40029859,40028968,40027946,40027465,40027034,40026746,40026331,40023395,40022826,40022484,40022054,40020353,40019933,40019645	Gene ID= ENSG00000008838.19 TPM= 33.25 Transcript Type= NA
chr17	40019102	40054426	40019102	40054426	-	transcript3570.chr17.nic@MED24	transcript3570.chr17.nic	protein_coding	40054361,40053469,40053298,40036116,40035722,40035117,40033345,40033056,40032649,40032043,40031538,40031159,40029748,40028826,40027909,40027383,40026856,40026647,40026156,40023131,40022645,40022394,40021955,40020273,40019785,40019102	40054426,40053768,40053380,40036154,40035795,40035349,40033456,40033206,40032762,40032090,40031620,40031245,40029859,40028968,40027946,40027465,40027034,40026746,40026331,40023395,40022826,40022484,40022054,40020353,40019933,40019645	Gene ID= ENSG00000008838.19 TPM= 15.74 Transcript Type= NA
chr17	40019102	40054405	40019102	40054405	-	ENST00000394128.6@MED24	ENST00000394128.6	protein_coding	40054361,40053469,40053298,40036116,40035722,40035117,40033345,40033056,40032649,40032043,40031538,40031159,40029748,40028826,40027909,40027383,40026856,40026647,40026156,40023131,40022645,40022394,40021955,40020273,40019785,40019102	40054405,40053635,40053380,40036154,40035795,40035349,40033456,40033206,40032762,40032090,40031620,40031245,40029859,40028968,40027946,40027465,40027034,40026746,40026331,40023395,40022826,40022484,40022054,40020353,40019933,40019645	Gene ID= ENSG00000008838.19 TPM= 54.27 Transcript Type= protein_coding
chr17	40019108	40054405	40019108	40054405	-	ENST00000394127.6@MED24	ENST00000394127.6	protein_coding	40054361,40053469,40053298,40035722,40035117,40033345,40033056,40032649,40032043,40031538,40031159,40029748,40028826,40027909,40027383,40026856,40026647,40026156,40023131,40022645,40022394,40021955,40020273,40019785,40019108	40054405,40053657,40053380,40035795,40035349,40033456,40033206,40032762,40032090,40031620,40031245,40029859,40028968,40027946,40027465,40027034,40026746,40026331,40023395,40022826,40022484,40022054,40020353,40019933,40019645	Gene ID= ENSG00000008838.19 TPM= 3.77 Transcript Type= protein_coding
chr17	40062810	40093867	40062810	40093867	+	ENST00000264637.8@THRA	ENST00000264637.8	protein_coding	40062810,40074192,40076871,40077508,40083835,40084610,40086707,40088242,40089206,40093020	40063092,40074541,40076938,40077608,40083982,40084815,40086853,40088500,40089333,40093867	Gene ID= ENSG00000126351.12 TPM= 47.87 Transcript Type= protein_coding
chr17	40090113	40092570	40090113	40092570	+	transcript3596.chr17.nnic@NA	transcript3596.chr17.nnic	NA	40090113	40092570	Gene ID= novel_gene_chr17_3597 TPM= 7.01 Transcript Type= NA
chr17	40092787	40100725	40092787	40100725	-	ENST00000246672.3@NR1D1	ENST00000246672.3	protein_coding	40100064,40097065,40096691,40096443,40095444,40094935,40093912,40092787	40100725,40097403,40096779,40096587,40096087,40095120,40094122,40093282	Gene ID= ENSG00000126368.5 TPM= 37.36 Transcript Type= protein_coding
chr17	40093548	40094751	40093548	40094751	+	transcript3598.chr17.nnic@NA	transcript3598.chr17.nnic	NA	40093548	40094751	Gene ID= novel_gene_chr17_3599 TPM= 2.34 Transcript Type= NA
chr17	40122229	40130293	40122229	40130293	+	transcript3616.chr17.nic@MSL1	transcript3616.chr17.nic	protein_coding	40122229,40123285,40126183,40129245	40122760,40123380,40126406,40130293	Gene ID= ENSG00000188895.11 TPM= 3.5 Transcript Type= NA
chr17	40122573	40130293	40122573	40130293	+	ENST00000577454.5@MSL1	ENST00000577454.5	protein_coding	40122573,40126183,40129245	40123380,40126406,40130293	Gene ID= ENSG00000188895.11 TPM= 26.85 Transcript Type= protein_coding
chr17	40166942	40172164	40166942	40172164	+	transcript3612.chr17.nic@CASC3	transcript3612.chr17.nic	protein_coding	40166942,40167850,40168203,40169324,40169598,40170447	40167612,40167948,40168417,40169446,40169662,40172164	Gene ID= ENSG00000108349.16 TPM= 11.68 Transcript Type= NA
chr17	40167850	40172164	40167850	40172164	+	transcript3613.chr17.nnic@CASC3	transcript3613.chr17.nnic	protein_coding	40167850,40168245,40169324,40169598,40170447	40167948,40168417,40169446,40169662,40172164	Gene ID= ENSG00000108349.16 TPM= 7.01 Transcript Type= NA
chr17	40140323	40172183	40140323	40172183	+	ENST00000264645.11@CASC3	ENST00000264645.11	protein_coding	40140323,40141207,40141570,40161753,40162002,40162725,40163481,40166797,40167498,40167850,40168203,40169324,40169598,40170447	40140779,40141234,40141607,40161911,40162153,40162901,40164166,40166861,40167612,40167948,40168417,40169446,40169662,40172183	Gene ID= ENSG00000108349.16 TPM= 60.71 Transcript Type= protein_coding
chr17	40164752	40168254	40164752	40168254	-	transcript3625.chr17.nnic@NA	transcript3625.chr17.nnic	NA	40164752	40168254	Gene ID= novel_gene_chr17_3626 TPM= 10.51 Transcript Type= NA
chr17	40166943	40171532	40166943	40171532	-	transcript3627.chr17.nnic@NA	transcript3627.chr17.nnic	NA	40166943	40171532	Gene ID= novel_gene_chr17_3628 TPM= 2.34 Transcript Type= NA
chr17	40179208	40195654	40179208	40195654	+	transcript3605.chr17.nic@RAPGEFL1	transcript3605.chr17.nic	protein_coding	40179208,40184214,40184581,40188866,40189208,40190434,40190640,40191316,40191582,40192213,40192606,40192926,40193363,40193664	40181694,40184349,40184678,40188978,40189375,40190531,40190762,40191494,40191672,40192263,40192693,40192990,40193417,40195654	Gene ID= ENSG00000108352.11 TPM= 8.17 Transcript Type= NA
chr17	40279995	40282690	40279995	40282690	+	transcript3635.chr17.nnic@NA	transcript3635.chr17.nnic	NA	40279995	40282690	Gene ID= novel_gene_chr17_3636 TPM= 5.84 Transcript Type= NA
chr17	40287633	40304657	40287633	40304657	+	ENST00000209728.8@CDC6	ENST00000209728.8	protein_coding	40287633,40289408,40291058,40291469,40293456,40293950,40294364,40295356,40296703,40300828,40301468,40301912	40288090,40289598,40291339,40291668,40293631,40294056,40294503,40295456,40296767,40301030,40301608,40304657	Gene ID= ENSG00000094804.9 TPM= 1.17 Transcript Type= protein_coding
chr17	40342363	40356795	40342363	40356795	+	ENST00000394081.7@RARA	ENST00000394081.7	protein_coding	40342363,40348316,40349784,40351910,40352331,40354302,40355263,40356009	40342867,40348464,40349925,40352070,40352507,40354506,40355421,40356795	Gene ID= ENSG00000131759.17 TPM= 42.03 Transcript Type= protein_coding
chr17	40340867	40343136	40340867	40343136	-	ENST00000581080.1@RARA-AS1	ENST00000581080.1	antisense_RNA	40342876,40341996,40340867	40343136,40342690,40341700	Gene ID= ENSG00000265666.1 TPM= 1.17 Transcript Type= antisense_RNA
chr17	40362779	40365452	40362779	40365452	+	transcript3648.chr17.nnic@NA	transcript3648.chr17.nnic	NA	40362779	40365452	Gene ID= novel_gene_chr17_3649 TPM= 25.69 Transcript Type= NA
chr17	40388516	40417950	40388516	40417950	-	ENST00000423485.5@TOP2A	ENST00000423485.5	protein_coding	40417771,40416740,40416422,40416005,40413480,40413195,40412759,40411645,40411354,40411109,40408492,40407967,40407549,40406832,40406584,40406384,40404791,40404377,40404152,40402906,40400850,40400529,40400209,40399872,40399040,40398773,40398558,40396283,40395449,40392585,40392218,40392068,40391506,40389965,40388516	40417950,40416895,40416512,40416068,40413625,40413292,40412971,40411818,40411455,40411246,40408630,40408124,40407674,40406942,40406689,40406493,40404883,40404491,40404273,40403054,40401081,40400663,40400409,40400067,40399131,40398937,40398641,40396465,40395539,40392737,40392341,40392111,40391640,40390164,40389647	Gene ID= ENSG00000131747.14 TPM= 4.67 Transcript Type= protein_coding
chr17	40443461	40457731	40443461	40457731	+	ENST00000269593.4@IGFBP4	ENST00000269593.4	protein_coding	40443461,40452985,40453928,40456449	40444084,40453142,40454062,40457731	Gene ID= ENSG00000141753.6 TPM= 1945.21 Transcript Type= protein_coding
chr17	40553769	40565472	40553769	40565472	-	ENST00000246657.2@CCR7	ENST00000246657.2	protein_coding	40565400,40558893,40553769	40565472,40558942,40555818	Gene ID= ENSG00000126353.3 TPM= 3.5 Transcript Type= protein_coding
chr17	40627710	40647817	40627710	40647817	-	transcript3675.chr17.nic@SMARCE1	transcript3675.chr17.nic	protein_coding	40647773,40645796,40645576,40642455,40637492,40636395,40635931,40632195,40631592,40630714,40630208,40627710	40647817,40645847,40645619,40642559,40637572,40636526,40636102,40632367,40631693,40630924,40630286,40628993	Gene ID= ENSG00000073584.18 TPM= 2.34 Transcript Type= NA
chr17	40628468	40647839	40628468	40647839	-	ENST00000431889.6@SMARCE1	ENST00000431889.6	protein_coding	40647773,40642455,40637492,40636395,40635931,40632195,40631592,40630714,40628468	40647839,40642559,40637572,40636526,40636102,40632367,40631693,40630924,40628993	Gene ID= ENSG00000073584.18 TPM= 1.17 Transcript Type= protein_coding
chr17	40640574	40647814	40640574	40647814	-	ENST00000474246.1@SMARCE1	ENST00000474246.1	protein_coding	40647773,40645796,40645576,40640574	40647814,40645847,40645619,40642559	Gene ID= ENSG00000073584.18 TPM= 1.17 Transcript Type= protein_coding
chr17	40819125	40836270	40819125	40836270	+	ENST00000301665.7@TMEM99	ENST00000301665.7	protein_coding	40819125,40833115,40834382	40819208,40833199,40836270	Gene ID= ENSG00000167920.8 TPM= 10.51 Transcript Type= protein_coding
chr17	40819106	40835085	40819106	40835085	+	ENST00000436612.5@TMEM99	ENST00000436612.5	protein_coding	40819106,40833115,40834382	40819170,40833199,40835085	Gene ID= ENSG00000167920.8 TPM= 3.5 Transcript Type= protein_coding
chr17	40922696	40937420	40922696	40937420	-	ENST00000209718.7@KRT23	ENST00000209718.7	protein_coding	40937346,40936208,40931373,40929940,40928446,40928238,40925354,40924472,40922696	40937420,40936953,40931455,40930096,40928607,40928360,40925574,40924503,40923083	Gene ID= ENSG00000108244.16 TPM= 2.34 Transcript Type= protein_coding
chr17	41500981	41505597	41500981	41505597	-	ENST00000246635.7@KRT13	ENST00000246635.7	protein_coding	41505056,41503643,41503287,41502937,41502687,41502374,41501719,41500981	41505597,41503725,41503443,41503098,41502812,41502594,41501744,41501362	Gene ID= ENSG00000171401.14 TPM= 5.84 Transcript Type= protein_coding
chr17	41513743	41522413	41513743	41522413	-	ENST00000254043.7@KRT15	ENST00000254043.7	protein_coding	41518330,41517083,41516808,41516104,41515885,41515472,41514649,41513743	41522413,41517165,41516964,41516265,41516010,41515692,41514674,41514120	Gene ID= ENSG00000171346.15 TPM= 29.19 Transcript Type= protein_coding
chr17	41523617	41528308	41523617	41528308	-	ENST00000361566.7@KRT19	ENST00000361566.7	protein_coding	41527828,41525191,41524843,41524379,41524143,41523617	41528308,41525273,41524999,41524540,41524268,41523997	Gene ID= ENSG00000171345.13 TPM= 1455.99 Transcript Type= protein_coding
chr17	41526451	41528375	41526451	41528375	-	transcript3728.chr17.nnic@NA	transcript3728.chr17.nnic	NA	41526451	41528375	Gene ID= novel_gene_chr17_3729 TPM= 22.18 Transcript Type= NA
chr17	41619437	41624577	41619437	41624577	-	ENST00000311208.12@KRT17	ENST00000311208.12	protein_coding	41624078,41622950,41622355,41621593,41620966,41620659,41620536,41619437	41624577,41623032,41622511,41621754,41621091,41620879,41620558,41619688	Gene ID= ENSG00000128422.15 TPM= 17.51 Transcript Type= protein_coding
chr17	41626327	41639021	41626327	41639021	-	transcript3733.chr17.nnic@KRT42P	transcript3733.chr17.nnic	transcribed_unprocessed_pseudogene	41638687,41635293,41634536,41630419,41629054,41628355,41627887,41627685,41626790,41626327	41639021,41635402,41634654,41630630,41629237,41628469,41628106,41627762,41626839,41626631	Gene ID= ENSG00000214514.7 TPM= 2.34 Transcript Type= NA
chr17	41688885	41691642	41688885	41691642	+	transcript3743.chr17.nnic@NA	transcript3743.chr17.nnic	NA	41688885	41691642	Gene ID= novel_gene_chr17_3744 TPM= 8.17 Transcript Type= NA
chr17	41688885	41691646	41688885	41691646	+	transcript3737.chr17.nnic@EIF1	transcript3737.chr17.nnic	protein_coding	41688885,41688988,41689778,41690088,41690782	41688894,41689069,41689941,41690189,41691646	Gene ID= ENSG00000173812.10 TPM= 37.36 Transcript Type= NA
chr17	41688893	41692668	41688893	41692668	+	ENST00000469257.1@EIF1	ENST00000469257.1	protein_coding	41688893,41689778,41690088,41690782	41689069,41689941,41690189,41692668	Gene ID= ENSG00000173812.10 TPM= 53.71 Transcript Type= protein_coding
chr17	41688885	41691646	41688885	41691646	+	ENST00000462917.1@EIF1	ENST00000462917.1	protein_coding	41688885,41690782	41690189,41691646	Gene ID= ENSG00000173812.10 TPM= 25.69 Transcript Type= retained_intron
chr17	41688895	41691622	41688895	41691622	+	ENST00000482111.1@EIF1	ENST00000482111.1	protein_coding	41688895,41689778,41690782	41689069,41690189,41691622	Gene ID= ENSG00000173812.10 TPM= 5.84 Transcript Type= retained_intron
chr17	41688901	41691630	41688901	41691630	+	ENST00000310837.8@EIF1	ENST00000310837.8	protein_coding	41688901,41690088,41690782	41689069,41690189,41691630	Gene ID= ENSG00000173812.10 TPM= 5.84 Transcript Type= processed_transcript
chr17	41722640	41734644	41722640	41734644	-	ENST00000347901.8@HAP1	ENST00000347901.8	protein_coding	41734166,41732719,41732230,41731937,41731638,41731493,41728201,41727762,41727053,41725859,41722640	41734644,41732798,41732394,41732118,41731743,41731559,41728331,41727836,41727144,41725897,41725154	Gene ID= ENSG00000173805.15 TPM= 3.5 Transcript Type= protein_coding
chr17	41754604	41786729	41754604	41786729	-	transcript3748.chr17.nnic@JUP	transcript3748.chr17.nnic	protein_coding	41786566,41771647,41769418,41768969,41767379,41764923,41764713,41762983,41758715,41758399,41757634,41757415,41756175,41755730,41754604	41786729,41771862,41769677,41769207,41767580,41765067,41764816,41763321,41758870,41758518,41757784,41757536,41756214,41755895,41755432	Gene ID= ENSG00000173801.16 TPM= 71.22 Transcript Type= NA
chr17	41754604	41786698	41754604	41786698	-	ENST00000310706.9@JUP	ENST00000310706.9	protein_coding	41786588,41771647,41769418,41768969,41767379,41764923,41764713,41762983,41758715,41758399,41757634,41757415,41756175,41755730,41754604	41786698,41771862,41769677,41769207,41767580,41765067,41764816,41763321,41758870,41758518,41757784,41757536,41756214,41755895,41755432	Gene ID= ENSG00000173801.16 TPM= 112.67 Transcript Type= protein_coding
chr17	41754604	41786698	41754604	41786698	-	ENST00000393931.7@JUP	ENST00000393931.7	protein_coding	41786588,41771647,41769418,41768969,41767379,41764923,41764713,41762983,41758715,41758399,41757634,41757415,41756175,41754604	41786698,41771862,41769677,41769207,41767580,41765067,41764816,41763321,41758870,41758518,41757784,41757536,41756214,41755895	Gene ID= ENSG00000173801.16 TPM= 102.16 Transcript Type= protein_coding
chr17	41801947	41812603	41801947	41812603	-	ENST00000355468.7@P3H4	ENST00000355468.7	protein_coding	41812364,41811454,41811132,41810863,41809706,41807859,41806796,41803287,41801947	41812603,41812142,41811284,41811034,41809834,41808004,41806879,41803431,41802979	Gene ID= ENSG00000141696.12 TPM= 28.02 Transcript Type= protein_coding
chr17	41812931	41823217	41812931	41823217	+	ENST00000321562.8@FKBP10	ENST00000321562.8	protein_coding	41812931,41817058,41818089,41818382,41819210,41819530,41820269,41820947,41821654,41822223	41813279,41817203,41818278,41818527,41819399,41819675,41820461,41821089,41821817,41823217	Gene ID= ENSG00000141756.18 TPM= 17.51 Transcript Type= protein_coding
chr17	41825181	41836236	41825181	41836236	-	transcript3759.chr17.nic@NT5C3B	transcript3759.chr17.nic	protein_coding	41836182,41835859,41835588,41835203,41835070,41832392,41830801,41828790,41827426,41825181	41836236,41835957,41835682,41835272,41835116,41832477,41830890,41828952,41827626,41825657	Gene ID= ENSG00000141698.16 TPM= 2.92 Transcript Type= NA
chr17	41825181	41836228	41825181	41836228	-	transcript3762.chr17.nic@NT5C3B	transcript3762.chr17.nic	protein_coding	41836079,41835859,41835203,41835070,41832392,41830801,41828790,41827426,41825181	41836228,41835957,41835272,41835116,41832477,41830890,41828952,41827626,41825657	Gene ID= ENSG00000141698.16 TPM= 4.09 Transcript Type= NA
chr17	41825181	41836258	41825181	41836258	-	ENST00000523903.5@NT5C3B	ENST00000523903.5	protein_coding	41835859,41835203,41835070,41832392,41830801,41828790,41827426,41825181	41836258,41835272,41835116,41832477,41830890,41828952,41827626,41825657	Gene ID= ENSG00000141698.16 TPM= 40.28 Transcript Type= retained_intron
chr17	41825181	41836202	41825181	41836202	-	ENST00000469698.5@NT5C3B	ENST00000469698.5	protein_coding	41835859,41835588,41835203,41835070,41832392,41830801,41828790,41827426,41825181	41836202,41835682,41835272,41835116,41832477,41830890,41828952,41827626,41825657	Gene ID= ENSG00000141698.16 TPM= 4.09 Transcript Type= retained_intron
chr17	41848518	41851447	41848518	41851447	-	ENST00000560400.1@AC125257.1	ENST00000560400.1	sense_overlapping	41848518	41851447	Gene ID= ENSG00000259623.1 TPM= 2.34 Transcript Type= sense_overlapping
chr17	41866917	41918962	41866917	41918962	-	ENST00000590151.5@ACLY	ENST00000590151.5	protein_coding	41918880,41913715,41912420,41910222,41909510,41908989,41907442,41906528,41905522,41904729,41901696,41898631,41897749,41896620,41893033,41892279,41887599,41886112,41884193,41883122,41878797,41878103,41873811,41872032,41871689,41869474,41869043,41868709,41866917	41918962,41913900,41912542,41910284,41909700,41909068,41907572,41906646,41905658,41904790,41901813,41898785,41897839,41896649,41893174,41892447,41887703,41886308,41884274,41883232,41878924,41878196,41873965,41872182,41871832,41869587,41869125,41868785,41867904	Gene ID= ENSG00000131473.16 TPM= 47.5 Transcript Type= protein_coding
chr17	41866908	41918987	41866908	41918987	-	ENST00000352035.6@ACLY	ENST00000352035.6	protein_coding	41918880,41913715,41912420,41910222,41909510,41908989,41907442,41906528,41905522,41904729,41901696,41898631,41897749,41896620,41893033,41892279,41887599,41886112,41884193,41883122,41878797,41878103,41873811,41872032,41871689,41869474,41869043,41868709,41866908	41918987,41913896,41912542,41910284,41909700,41909068,41907572,41906646,41905658,41904790,41901813,41898785,41897839,41896649,41893174,41892447,41887703,41886308,41884274,41883232,41878924,41878196,41873965,41872182,41871832,41869587,41869125,41868785,41867904	Gene ID= ENSG00000131473.16 TPM= 137.4 Transcript Type= protein_coding
chr17	41866931	41919019	41866931	41919019	-	ENST00000353196.5@ACLY	ENST00000353196.5	protein_coding	41918880,41913715,41912420,41910222,41909510,41908989,41907442,41906528,41905522,41904729,41901696,41898631,41897749,41893033,41892279,41887599,41886112,41884193,41883122,41878797,41878103,41873811,41872032,41871689,41869474,41869043,41868709,41866931	41919019,41913896,41912542,41910284,41909700,41909068,41907572,41906646,41905658,41904790,41901813,41898785,41897839,41893174,41892447,41887703,41886308,41884274,41883232,41878924,41878196,41873965,41872182,41871832,41869587,41869125,41868785,41867904	Gene ID= ENSG00000131473.16 TPM= 78.81 Transcript Type= protein_coding
chr17	41867574	41919022	41867574	41919022	-	ENST00000393896.6@ACLY	ENST00000393896.6	protein_coding	41918880,41913715,41912420,41910222,41909510,41908989,41907442,41906528,41905522,41904729,41901696,41898631,41897749,41893033,41892279,41887599,41886112,41884193,41883122,41878797,41878103,41873811,41872032,41871689,41869474,41869043,41868709,41867574	41919022,41913900,41912542,41910284,41909700,41909068,41907572,41906646,41905658,41904790,41901813,41898785,41897839,41893174,41892447,41887703,41886308,41884274,41883232,41878924,41878196,41873965,41872182,41871832,41869587,41869125,41868785,41867904	Gene ID= ENSG00000131473.16 TPM= 8.17 Transcript Type= protein_coding
chr17	41966815	41975176	41966815	41975176	+	ENST00000393888.1@CNP	ENST00000393888.1	protein_coding	41966815,41968073,41971892,41973475	41966887,41968740,41972031,41975176	Gene ID= ENSG00000173786.16 TPM= 123.18 Transcript Type= protein_coding
chr17	41976433	42017653	41976433	42017653	-	ENST00000457167.8@DNAJC7	ENST00000457167.8	protein_coding	42017340,42000482,41997115,41996311,41994870,41990264,41989404,41988732,41987819,41983563,41982255,41981855,41977261,41976433	42017653,42000570,41997239,41996424,41994944,41990382,41989557,41988896,41987910,41983636,41982401,41982007,41977323,41976770	Gene ID= ENSG00000168259.14 TPM= 37.36 Transcript Type= protein_coding
chr17	41986531	42017427	41986531	42017427	-	transcript3817.chr17.nic@DNAJC7	transcript3817.chr17.nic	protein_coding	42017340,42000482,41997115,41996311,41994870,41990264,41989404,41988732,41986531	42017427,42000570,41997239,41996424,41994944,41990382,41989557,41988896,41987910	Gene ID= ENSG00000168259.14 TPM= 2.34 Transcript Type= NA
chr17	41986531	42017436	41986531	42017436	-	transcript3819.chr17.nic@DNAJC7	transcript3819.chr17.nic	protein_coding	42017340,42000482,41997115,41996311,41994870,41990264,41989404,41986531	42017436,42000570,41997239,41996424,41994944,41990382,41989557,41988896	Gene ID= ENSG00000168259.14 TPM= 4.67 Transcript Type= NA
chr17	41976479	42017151	41976479	42017151	-	ENST00000426588.7@DNAJC7	ENST00000426588.7	protein_coding	42017040,42000482,41997115,41996311,41994870,41990264,41989404,41988732,41987819,41983563,41982255,41981855,41977261,41976479	42017151,42000570,41997239,41996424,41994944,41990382,41989557,41988896,41987910,41983636,41982401,41982007,41977323,41976770	Gene ID= ENSG00000168259.14 TPM= 1.17 Transcript Type= protein_coding
chr17	42038232	42050614	42038232	42050614	-	ENST00000587304.2@C17orf113	ENST00000587304.2	protein_coding	42050557,42042834,42038232	42050614,42043563,42041189	Gene ID= ENSG00000267221.2 TPM= 1.17 Transcript Type= protein_coding
chr17	42101404	42112745	42101404	42112745	-	transcript3838.chr17.nnic@DHX58	transcript3838.chr17.nnic	protein_coding	42112605,42112113,42111725,42111296,42110723,42109270,42107982,42107604,42105736,42105018,42104766,42103608,42102216,42101404	42112745,42112205,42111893,42111497,42110913,42109386,42108108,42107795,42105989,42105167,42104927,42103798,42102291,42101946	Gene ID= ENSG00000108771.12 TPM= 2.34 Transcript Type= NA
chr17	42101404	42112722	42101404	42112722	-	transcript3841.chr17.nic@DHX58	transcript3841.chr17.nic	protein_coding	42112113,42111725,42111296,42110723,42109270,42107982,42107604,42105736,42105018,42104766,42103608,42102216,42101404	42112722,42111893,42111497,42110913,42109386,42108108,42107795,42105989,42105167,42104927,42103798,42102312,42101946	Gene ID= ENSG00000108771.12 TPM= 5.84 Transcript Type= NA
chr17	42101404	42112722	42101404	42112722	-	transcript3844.chr17.nnic@DHX58	transcript3844.chr17.nnic	protein_coding	42112113,42111725,42111296,42110723,42109270,42107982,42107604,42105736,42105018,42104766,42102216,42101404	42112722,42111893,42111497,42110913,42109386,42108108,42107795,42105989,42105167,42104927,42102291,42101946	Gene ID= ENSG00000108771.12 TPM= 2.34 Transcript Type= NA
chr17	42101404	42112733	42101404	42112733	-	ENST00000251642.7@DHX58	ENST00000251642.7	protein_coding	42112605,42112113,42111725,42111296,42110723,42109270,42107982,42107604,42105736,42105018,42104766,42103608,42102216,42101404	42112733,42112205,42111893,42111497,42110913,42109386,42108108,42107795,42105989,42105167,42104927,42103798,42102312,42101946	Gene ID= ENSG00000108771.12 TPM= 17.51 Transcript Type= protein_coding
chr17	42113118	42121058	42113118	42121058	-	ENST00000465682.5@KAT2A	ENST00000465682.5	protein_coding	42120966,42120706,42120225,42120030,42119537,42119054,42118297,42117907,42117678,42117388,42117035,42115723,42114892,42114490,42114358,42114219,42114000,42113118	42121058,42120829,42120370,42120119,42119718,42119436,42118403,42118017,42117814,42117596,42117161,42115833,42115035,42114604,42114394,42114282,42114084,42113842	Gene ID= ENSG00000108773.10 TPM= 74.14 Transcript Type= nonsense_mediated_decay
chr17	42113108	42121358	42113108	42121358	-	ENST00000225916.9@KAT2A	ENST00000225916.9	protein_coding	42120966,42120706,42120225,42120030,42119537,42119245,42118297,42117907,42117678,42117388,42117035,42115723,42114892,42114490,42114358,42114219,42114000,42113108	42121358,42120829,42120370,42120119,42119718,42119436,42118403,42118017,42117814,42117596,42117161,42115833,42115035,42114604,42114394,42114282,42114084,42113842	Gene ID= ENSG00000108773.10 TPM= 41.45 Transcript Type= protein_coding
chr17	42124978	42154989	42124978	42154989	-	transcript3858.chr17.nic@RAB5C	transcript3858.chr17.nic	protein_coding	42154893,42137762,42130337,42128649,42128261,42126755,42124978	42154989,42137878,42130590,42128800,42128383,42126848,42125898	Gene ID= ENSG00000108774.14 TPM= 67.72 Transcript Type= NA
chr17	42124976	42155017	42124976	42155017	-	ENST00000346213.8@RAB5C	ENST00000346213.8	protein_coding	42154893,42130337,42128649,42128261,42126755,42124976	42155017,42130590,42128800,42128383,42126848,42125898	Gene ID= ENSG00000108774.14 TPM= 428.51 Transcript Type= protein_coding
chr17	42189088	42194195	42189088	42194195	-	ENST00000301671.12@GHDC	ENST00000301671.12	protein_coding	42193767,42193317,42192906,42192241,42191018,42190832,42190624,42190185,42189088	42194195,42193594,42193027,42192742,42191210,42190903,42190757,42190270,42189921	Gene ID= ENSG00000167925.15 TPM= 50.79 Transcript Type= protein_coding
chr17	42189089	42194484	42189089	42194484	-	ENST00000587427.5@GHDC	ENST00000587427.5	protein_coding	42194393,42193767,42193317,42192906,42192241,42191018,42190832,42190624,42190185,42189089	42194484,42193850,42193594,42193027,42192742,42191210,42190903,42190757,42190270,42189921	Gene ID= ENSG00000167925.15 TPM= 37.95 Transcript Type= protein_coding
chr17	42199168	42276396	42199168	42276396	-	transcript3914.chr17.nnic@STAT5B	transcript3914.chr17.nnic	protein_coding	42276248,42232000,42227529,42224779,42223382,42219712,42219312,42218723,42218151,42217377,42217160,42216014,42211984,42210403,42210171,42207558,42202757,42202340,42199168	42276396,42232137,42227657,42224868,42223556,42219842,42219463,42218878,42218330,42217464,42217282,42216106,42212190,42210497,42210301,42207728,42202808,42202447,42201864	Gene ID= ENSG00000173757.9 TPM= 4.67 Transcript Type= NA
chr17	42199168	42276461	42199168	42276461	-	transcript3923.chr17.nnic@STAT5B	transcript3923.chr17.nnic	protein_coding	42276248,42232000,42224779,42223382,42219712,42219312,42218723,42218151,42217377,42217160,42216014,42211984,42210403,42210171,42207558,42202757,42202340,42199168	42276461,42232137,42224868,42223556,42219842,42219463,42218878,42218330,42217464,42217282,42216106,42212190,42210497,42210301,42207728,42202808,42202447,42201864	Gene ID= ENSG00000173757.9 TPM= 7.01 Transcript Type= NA
chr17	42199168	42276406	42199168	42276406	-	ENST00000293328.7@STAT5B	ENST00000293328.7	protein_coding	42276248,42232000,42227529,42224779,42223382,42219712,42219312,42218723,42218151,42217377,42217160,42216014,42211984,42210403,42210171,42207558,42202757,42202340,42199168	42276406,42232137,42227685,42224868,42223556,42219842,42219463,42218878,42218330,42217464,42217282,42216106,42212190,42210497,42210301,42207728,42202808,42202447,42201864	Gene ID= ENSG00000173757.9 TPM= 155.87 Transcript Type= protein_coding
chr17	42217690	42276406	42217690	42276406	-	ENST00000468312.1@STAT5B	ENST00000468312.1	protein_coding	42276248,42232000,42227529,42224779,42223382,42219712,42219312,42218723,42217690	42276406,42232137,42227685,42224868,42223556,42219842,42219463,42218878,42218330	Gene ID= ENSG00000173757.9 TPM= 2.92 Transcript Type= retained_intron
chr17	42313324	42388568	42313324	42388568	-	ENST00000264657.9@STAT3	ENST00000264657.9	protein_coding	42388279,42348389,42346569,42345559,42339314,42338731,42337763,42337435,42333891,42333673,42331472,42329747,42329554,42329410,42326116,42324963,42324711,42323573,42323260,42323004,42322282,42317182,42316789,42313324	42388568,42348539,42346713,42345657,42339409,42338812,42337857,42337586,42334049,42333765,42331531,42329776,42329647,42329457,42326199,42325061,42324846,42323625,42323354,42323143,42322494,42317224,42316901,42315800	Gene ID= ENSG00000168610.14 TPM= 80.65 Transcript Type= protein_coding
chr17	42314854	42388439	42314854	42388439	-	ENST00000585517.5@STAT3	ENST00000585517.5	protein_coding	42388279,42348389,42346569,42345559,42339314,42338731,42337763,42337435,42333891,42333673,42331472,42329747,42329554,42329410,42326116,42324963,42324711,42323573,42323260,42323004,42322282,42317182,42316789,42314854	42388439,42348520,42346713,42345657,42339409,42338812,42337857,42337586,42334049,42333765,42331531,42329776,42329647,42329457,42326199,42325061,42324846,42323625,42323354,42323143,42322494,42317224,42316851,42315800	Gene ID= ENSG00000168610.14 TPM= 58.48 Transcript Type= protein_coding
chr17	42315559	42388414	42315559	42388414	-	ENST00000404395.3@STAT3	ENST00000404395.3	protein_coding	42388279,42348389,42346569,42345559,42339314,42338731,42337763,42337435,42333891,42333673,42331472,42329747,42329554,42329410,42326116,42324963,42324711,42323573,42323260,42323004,42322285,42317182,42316789,42315559	42388414,42348517,42346713,42345657,42339409,42338812,42337857,42337586,42334049,42333765,42331531,42329776,42329647,42329457,42326199,42325061,42324846,42323625,42323354,42323143,42322494,42317224,42316901,42315800	Gene ID= ENSG00000168610.14 TPM= 12.95 Transcript Type= protein_coding
chr17	42386525	42388463	42386525	42388463	-	transcript3940.chr17.nnic@NA	transcript3940.chr17.nnic	NA	42386525	42388463	Gene ID= novel_gene_chr17_3941 TPM= 3.5 Transcript Type= NA
chr17	42402452	42423313	42402452	42423313	-	transcript3946.chr17.nnic@CAVIN1	transcript3946.chr17.nnic	protein_coding	42422627,42404536,42402452	42423313,42405388,42404373	Gene ID= ENSG00000177469.12 TPM= 148.87 Transcript Type= NA
chr17	42402452	42423517	42402452	42423517	-	ENST00000357037.5@CAVIN1	ENST00000357037.5	protein_coding	42422627,42402452	42423517,42405388	Gene ID= ENSG00000177469.12 TPM= 1427.38 Transcript Type= protein_coding
chr17	42458880	42522582	42458880	42522582	+	ENST00000264649.10@ATP6V0A1	ENST00000264649.10	protein_coding	42458880,42460848,42466429,42468010,42470090,42477639,42478463,42480667,42483038,42487155,42490487,42494334,42495034,42495626,42498924,42500707,42501197,42507520,42513861,42514289,42521027	42458963,42461011,42466507,42468107,42470218,42477742,42478589,42480749,42483131,42487367,42490637,42494473,42495188,42495716,42499042,42500923,42501304,42507627,42513978,42514460,42522582	Gene ID= ENSG00000033627.16 TPM= 25.69 Transcript Type= protein_coding
chr17	42536172	42544449	42536172	42544449	+	ENST00000225927.6@NAGLU	ENST00000225927.6	protein_coding	42536172,42537398,42538339,42538670,42540950,42543028	42536655,42537545,42538485,42538755,42541206,42544449	Gene ID= ENSG00000108784.9 TPM= 112.65 Transcript Type= protein_coding
chr17	42536244	42544449	42536244	42544449	+	transcript3974.chr17.nnic@NAGLU	transcript3974.chr17.nnic	protein_coding	42536244,42536817,42538339,42538670,42540950,42543028	42536655,42537545,42538485,42538755,42541206,42544449	Gene ID= ENSG00000108784.9 TPM= 8.15 Transcript Type= NA
chr17	42536216	42544449	42536216	42544449	+	transcript3980.chr17.nic@NAGLU	transcript3980.chr17.nic	protein_coding	42536216,42538339,42538670,42540950,42543028	42537545,42538485,42538755,42541206,42544449	Gene ID= ENSG00000108784.9 TPM= 15.16 Transcript Type= NA
chr17	42536233	42544449	42536233	42544449	+	transcript3984.chr17.nic@NAGLU	transcript3984.chr17.nic	protein_coding	42536233,42537398,42538339,42538670,42543028	42536655,42537545,42538485,42538755,42544449	Gene ID= ENSG00000108784.9 TPM= 13.81 Transcript Type= NA
chr17	42536243	42544449	42536243	42544449	+	transcript3985.chr17.nic@NAGLU	transcript3985.chr17.nic	protein_coding	42536243,42538339,42538670,42540950,42543028	42536655,42538485,42538755,42541206,42544449	Gene ID= ENSG00000108784.9 TPM= 12.24 Transcript Type= NA
chr17	42536216	42544449	42536216	42544449	+	transcript3988.chr17.nic@NAGLU	transcript3988.chr17.nic	protein_coding	42536216,42538339,42538670,42543028	42537545,42538485,42538755,42544449	Gene ID= ENSG00000108784.9 TPM= 6.81 Transcript Type= NA
chr17	42541907	42545620	42541907	42545620	-	transcript3994.chr17.nnic@NA	transcript3994.chr17.nnic	NA	42541907	42545620	Gene ID= novel_gene_chr17_3995 TPM= 3.5 Transcript Type= NA
chr17	42545447	42549838	42545447	42549838	-	transcript3996.chr17.nnic@NA	transcript3996.chr17.nnic	NA	42545447	42549838	Gene ID= novel_gene_chr17_3997 TPM= 2.34 Transcript Type= NA
chr17	42549214	42555213	42549214	42555213	+	ENST00000585807.5@HSD17B1	ENST00000585807.5	protein_coding	42549214,42553124,42553439,42553794,42554405,42554669	42553030,42553291,42553618,42553887,42554582,42555213	Gene ID= ENSG00000108786.10 TPM= 2.34 Transcript Type= protein_coding
chr17	42552436	42554748	42552436	42554748	-	ENST00000590513.2@AC067852.2	ENST00000590513.2	antisense_RNA	42552436	42554748	Gene ID= ENSG00000266962.2 TPM= 19.85 Transcript Type= antisense_RNA
chr17	42562132	42566274	42562132	42566274	+	transcript3962.chr17.nic@COASY	transcript3962.chr17.nic	protein_coding	42562132,42562933,42563961,42564446,42564709,42564983,42565227,42565471,42565659,42565906	42562219,42563322,42564175,42564577,42564898,42565047,42565311,42565568,42565805,42566274	Gene ID= ENSG00000068120.14 TPM= 3.5 Transcript Type= NA
chr17	42562167	42566275	42562167	42566275	+	ENST00000393818.2@COASY	ENST00000393818.2	protein_coding	42562167,42563961,42564446,42564709,42564983,42565227,42565471,42565659,42565906	42563322,42564175,42564577,42564898,42565047,42565311,42565568,42565805,42566275	Gene ID= ENSG00000068120.14 TPM= 56.04 Transcript Type= protein_coding
chr17	42562147	42566260	42562147	42566260	+	ENST00000421097.6@COASY	ENST00000421097.6	protein_coding	42562147,42562612,42563961,42564446,42564709,42564983,42565227,42565471,42565659,42565906	42562219,42563322,42564175,42564577,42564898,42565047,42565311,42565568,42565805,42566260	Gene ID= ENSG00000068120.14 TPM= 5.84 Transcript Type= protein_coding
chr17	42567072	42573239	42567072	42573239	+	ENST00000246912.8@MLX	ENST00000246912.8	protein_coding	42567072,42567619,42568470,42568837,42569204,42569507,42569982,42571547	42567328,42567655,42568559,42568943,42569303,42569606,42570183,42573239	Gene ID= ENSG00000108788.11 TPM= 3.5 Transcript Type= protein_coding
chr17	42567055	42572705	42567055	42572705	+	transcript4073.chr17.nic@MLX	transcript4073.chr17.nic	protein_coding	42567055,42567619,42568470,42569204,42569507,42569982,42571547	42567166,42567655,42568943,42569303,42569606,42570183,42572705	Gene ID= ENSG00000108788.11 TPM= 8.56 Transcript Type= NA
chr17	42567055	42572705	42567055	42572705	+	transcript4081.chr17.nic@MLX	transcript4081.chr17.nic	protein_coding	42567055,42567619,42568470,42569204,42569982,42571547	42567166,42567655,42568943,42569606,42570183,42572705	Gene ID= ENSG00000108788.11 TPM= 9.14 Transcript Type= NA
chr17	42567068	42573239	42567068	42573239	+	ENST00000435881.6@MLX	ENST00000435881.6	protein_coding	42567068,42567619,42568470,42568837,42569204,42569507,42569982,42571547	42567166,42567655,42568559,42568943,42569303,42569606,42570183,42573239	Gene ID= ENSG00000108788.11 TPM= 14.01 Transcript Type= protein_coding
chr17	42567072	42573239	42567072	42573239	+	ENST00000346833.8@MLX	ENST00000346833.8	protein_coding	42567072,42567619,42568837,42569204,42569507,42569982,42571547	42567166,42567655,42568943,42569303,42569606,42570183,42573239	Gene ID= ENSG00000108788.11 TPM= 2.34 Transcript Type= protein_coding
chr17	42572315	42577795	42572315	42577795	-	ENST00000393795.7@PSMC3IP	ENST00000393795.7	protein_coding	42577653,42577461,42577213,42574099,42573478,42573311,42573107,42572315	42577795,42577561,42577302,42574210,42573623,42573364,42573166,42573024	Gene ID= ENSG00000131470.14 TPM= 1.17 Transcript Type= protein_coding
chr17	42572343	42577697	42572343	42577697	-	ENST00000587209.5@PSMC3IP	ENST00000587209.5	protein_coding	42577461,42577213,42574099,42573478,42573311,42573107,42572343	42577697,42577302,42574210,42573623,42573364,42573166,42573024	Gene ID= ENSG00000131470.14 TPM= 1.17 Transcript Type= protein_coding
chr17	42579515	42609386	42579515	42609386	-	transcript4047.chr17.nnic@RETREG3	transcript4047.chr17.nnic	protein_coding	42609086,42596533,42592056,42587834,42586765,42586053,42585125,42583498,42582674,42579515	42609386,42596627,42592162,42587864,42586891,42586137,42585262,42583580,42582806,42582270	Gene ID= ENSG00000141699.10 TPM= 19.27 Transcript Type= NA
chr17	42579515	42609384	42579515	42609384	-	ENST00000309428.9@RETREG3	ENST00000309428.9	protein_coding	42609086,42592056,42587834,42586765,42586053,42585125,42583498,42582674,42579515	42609384,42592162,42587864,42586891,42586137,42585262,42583580,42582806,42582270	Gene ID= ENSG00000141699.10 TPM= 83.48 Transcript Type= protein_coding
chr17	42609676	42615234	42609676	42615234	+	ENST00000251413.7@TUBG1	ENST00000251413.7	protein_coding	42609676,42610108,42610423,42612075,42612427,42612947,42613647,42613849,42614260,42614496,42614844	42609786,42610220,42610590,42612143,42612506,42613073,42613733,42613998,42614412,42614657,42615234	Gene ID= ENSG00000131462.7 TPM= 119.09 Transcript Type= protein_coding
chr17	42659305	42667006	42659305	42667006	+	ENST00000251412.7@TUBG2	ENST00000251412.7	protein_coding	42659305,42659834,42660149,42660639,42662973,42663377,42665476,42665678,42666087,42666323,42666603	42659552,42659946,42660316,42660707,42663052,42663503,42665562,42665827,42666239,42666484,42667006	Gene ID= ENSG00000037042.8 TPM= 40.87 Transcript Type= protein_coding
chr17	42667914	42676995	42667914	42676995	-	transcript4006.chr17.nic@PLEKHH3	transcript4006.chr17.nic	protein_coding	42676402,42674741,42674354,42673934,42673643,42673399,42673176,42672086,42671351,42671003,42670573,42669943,42669430,42667914	42676995,42674875,42674409,42674013,42673834,42673556,42673296,42672392,42671558,42671130,42670705,42670376,42669621,42668303	Gene ID= ENSG00000068137.14 TPM= 5.95 Transcript Type= NA
chr17	42667914	42676016	42667914	42676016	-	transcript4007.chr17.nnic@PLEKHH3	transcript4007.chr17.nnic	protein_coding	42675834,42674354,42673934,42673643,42673399,42673176,42672086,42671351,42670994,42670573,42669918,42669430,42667914	42676016,42674409,42674013,42673834,42673556,42673296,42672392,42671558,42671130,42670705,42670376,42669621,42668303	Gene ID= ENSG00000068137.14 TPM= 3.04 Transcript Type= NA
chr17	42667914	42677029	42667914	42677029	-	transcript4011.chr17.nic@PLEKHH3	transcript4011.chr17.nic	protein_coding	42676402,42674354,42673934,42673643,42673399,42673176,42672086,42671351,42671003,42670573,42669943,42669430,42667914	42677029,42674409,42674013,42673834,42673556,42673296,42672392,42671558,42671130,42670705,42670376,42669621,42668303	Gene ID= ENSG00000068137.14 TPM= 8.29 Transcript Type= NA
chr17	42667914	42675582	42667914	42675582	-	transcript4014.chr17.nic@PLEKHH3	transcript4014.chr17.nic	protein_coding	42674354,42673934,42673643,42673399,42673176,42672086,42671351,42670994,42670573,42669918,42669430,42667914	42675582,42674013,42673834,42673556,42673296,42672392,42671558,42671130,42670705,42670376,42669621,42668303	Gene ID= ENSG00000068137.14 TPM= 4.2 Transcript Type= NA
chr17	42667944	42676994	42667944	42676994	-	ENST00000293349.10@PLEKHH3	ENST00000293349.10	protein_coding	42676402,42674354,42673934,42673643,42673399,42673176,42672086,42671351,42671003,42670573,42669918,42669430,42667944	42676994,42674409,42674013,42673834,42673556,42673296,42672392,42671558,42671130,42670705,42670376,42669621,42668303	Gene ID= ENSG00000068137.14 TPM= 19.85 Transcript Type= protein_coding
chr17	42667914	42676951	42667914	42676951	-	ENST00000591022.5@PLEKHH3	ENST00000591022.5	protein_coding	42676402,42674354,42673934,42673643,42673399,42673176,42672086,42671351,42670994,42670573,42669918,42669430,42667914	42676951,42674409,42674013,42673834,42673556,42673296,42672392,42671558,42671130,42670705,42670376,42669621,42668303	Gene ID= ENSG00000068137.14 TPM= 11.21 Transcript Type= protein_coding
chr17	42700275	42745030	42700275	42745030	-	ENST00000428826.6@EZH1	ENST00000428826.6	protein_coding	42745011,42730828,42728825,42727635,42724305,42722795,42720273,42719105,42718454,42717976,42713209,42712289,42709846,42708876,42707958,42706007,42705088,42704602,42703740,42702877,42700275	42745030,42730918,42728952,42727763,42724424,42722915,42720449,42719207,42718617,42718067,42713389,42712485,42709937,42708916,42708083,42706185,42705183,42704683,42703820,42702961,42702592	Gene ID= ENSG00000108799.12 TPM= 36.2 Transcript Type= protein_coding
chr17	42751358	42753887	42751358	42753887	-	transcript4141.chr17.nnic@NA	transcript4141.chr17.nnic	NA	42751358	42753887	Gene ID= novel_gene_chr17_4142 TPM= 2.34 Transcript Type= NA
chr17	42760775	42763041	42760775	42763041	+	ENST00000589683.5@RAMP2	ENST00000589683.5	protein_coding	42760775,42761834,42762355,42762597	42761012,42761899,42762463,42763041	Gene ID= ENSG00000131477.10 TPM= 4.09 Transcript Type= protein_coding
chr17	42761194	42763036	42761194	42763036	+	ENST00000253796.9@RAMP2	ENST00000253796.9	protein_coding	42761194,42761834,42762355,42762597	42761358,42761899,42762463,42763036	Gene ID= ENSG00000131477.10 TPM= 47.29 Transcript Type= protein_coding
chr17	42773436	42779599	42773436	42779599	+	ENST00000253794.6@VPS25	ENST00000253794.6	protein_coding	42773436,42773733,42774646,42775381,42776245,42778957	42773528,42773878,42774699,42775469,42776320,42779599	Gene ID= ENSG00000131475.6 TPM= 56.04 Transcript Type= protein_coding
chr17	42797634	42798704	42797634	42798704	-	ENST00000328434.7@COA3	ENST00000328434.7	protein_coding	42798468,42797634	42798704,42798167	Gene ID= ENSG00000183978.7 TPM= 57.21 Transcript Type= protein_coding
chr17	42810134	42824263	42810134	42824263	-	ENST00000361523.8@BECN1	ENST00000361523.8	protein_coding	42824133,42823748,42820774,42819548,42818787,42818544,42818221,42815908,42814524,42813948,42811655,42810134	42824263,42823879,42820841,42819609,42818877,42818680,42818415,42816054,42814673,42814008,42811797,42810928	Gene ID= ENSG00000126581.12 TPM= 67.34 Transcript Type= protein_coding
chr17	42810137	42824263	42810137	42824263	-	ENST00000590099.5@BECN1	ENST00000590099.5	protein_coding	42824155,42823748,42820774,42819548,42818787,42818544,42818221,42815908,42814524,42813948,42811655,42810137	42824263,42823879,42820841,42819609,42818877,42818680,42818415,42816054,42814673,42814008,42811797,42810928	Gene ID= ENSG00000126581.12 TPM= 90.69 Transcript Type= protein_coding
chr17	42833418	42843239	42833418	42843239	+	transcript4037.chr17.nic@PSME3	transcript4037.chr17.nic	protein_coding	42833418,42834344,42834515,42834772,42837649,42838093,42838731,42838945,42839112,42839294,42841498	42833939,42834376,42834577,42834876,42837697,42838205,42838799,42839012,42839166,42839380,42843239	Gene ID= ENSG00000131467.10 TPM= 3.5 Transcript Type= NA
chr17	42833142	42843758	42833142	42843758	+	ENST00000541124.5@PSME3	ENST00000541124.5	protein_coding	42833142,42834344,42834515,42834772,42837649,42838093,42838945,42839112,42839294,42841498	42833673,42834376,42834577,42834876,42837697,42838205,42839012,42839166,42839380,42843758	Gene ID= ENSG00000131467.10 TPM= 7.01 Transcript Type= protein_coding
chr17	42844600	42850707	42844600	42850707	+	ENST00000253799.7@AOC2	ENST00000253799.7	protein_coding	42844600,42849086,42849601,42850082	42846214,42849371,42849730,42850707	Gene ID= ENSG00000131480.8 TPM= 2.34 Transcript Type= protein_coding
chr17	42851152	42858124	42851152	42858124	+	transcript4099.chr17.nnic@AOC3	transcript4099.chr17.nnic	protein_coding	42851152,42854448,42855444,42856275,42856643	42852943,42854733,42855573,42856424,42858124	Gene ID= ENSG00000131471.6 TPM= 28.49 Transcript Type= NA
chr17	42851341	42858124	42851341	42858124	+	transcript4105.chr17.nnic@AOC3	transcript4105.chr17.nnic	protein_coding	42851341,42853272,42854448,42855444,42856275	42852943,42853364,42854733,42855573,42858124	Gene ID= ENSG00000131471.6 TPM= 77.14 Transcript Type= NA
chr17	42851184	42858124	42851184	42858124	+	ENST00000308423.6@AOC3	ENST00000308423.6	protein_coding	42851184,42854448,42855444,42856275	42852943,42854733,42855573,42858124	Gene ID= ENSG00000131471.6 TPM= 498.06 Transcript Type= protein_coding
chr17	42851184	42858128	42851184	42858128	+	ENST00000613571.1@AOC3	ENST00000613571.1	protein_coding	42851184,42854448,42856275	42852943,42854733,42858128	Gene ID= ENSG00000131471.6 TPM= 60.8 Transcript Type= protein_coding
chr17	42851769	42858120	42851769	42858120	+	transcript4137.chr17.nnic@NA	transcript4137.chr17.nnic	NA	42851769	42858120	Gene ID= novel_gene_chr17_4138 TPM= 5.84 Transcript Type= NA
chr17	42950546	42964476	42950546	42964476	-	ENST00000427569.6@AARSD1	ENST00000427569.6	protein_coding	42964402,42964106,42961192,42957138,42956404,42956204,42955842,42955158,42954876,42953724,42951800,42950546	42964476,42964237,42961351,42957195,42956560,42956320,42955972,42955224,42954967,42953778,42951894,42950728	Gene ID= ENSG00000266967.6 TPM= 14.01 Transcript Type= protein_coding
chr17	42980565	42993690	42980565	42993690	+	ENST00000361677.5@RUNDC1	ENST00000361677.5	protein_coding	42980565,42987256,42989341,42990317,42990851	42981074,42987414,42989539,42990436,42993690	Gene ID= ENSG00000198863.7 TPM= 10.51 Transcript Type= protein_coding
chr17	42998434	43002959	42998434	43002959	+	ENST00000253788.9@RPL27	ENST00000253788.9	protein_coding	42998434,42998749,42999933,43002673,43002872	42998471,42998831,43000102,43002783,43002959	Gene ID= ENSG00000131469.12 TPM= 293.07 Transcript Type= protein_coding
chr17	42998477	43002932	42998477	43002932	+	ENST00000589913.5@RPL27	ENST00000589913.5	protein_coding	42998477,42999933,43002673,43002872	42998831,43000102,43002783,43002932	Gene ID= ENSG00000131469.12 TPM= 8.17 Transcript Type= protein_coding
chr17	43006725	43014456	43006725	43014456	+	ENST00000415816.6@IFI35	ENST00000415816.6	protein_coding	43006725,43012179,43013047,43013267,43013476,43013776,43014108	43006968,43012277,43013194,43013373,43013662,43013882,43014456	Gene ID= ENSG00000068079.7 TPM= 21.99 Transcript Type= protein_coding
chr17	43006815	43014456	43006815	43014456	+	transcript4176.chr17.nic@IFI35	transcript4176.chr17.nic	protein_coding	43006815,43012179,43013047,43013267,43013476	43006968,43012277,43013194,43013379,43014456	Gene ID= ENSG00000068079.7 TPM= 2.72 Transcript Type= NA
chr17	43006740	43014456	43006740	43014456	+	ENST00000438323.2@IFI35	ENST00000438323.2	protein_coding	43006740,43012179,43013047,43013267,43013476,43013776,43014108	43006968,43012277,43013194,43013379,43013662,43013882,43014456	Gene ID= ENSG00000068079.7 TPM= 30.16 Transcript Type= protein_coding
chr17	43014605	43022418	43014605	43022418	-	ENST00000355653.7@VAT1	ENST00000355653.7	protein_coding	43021936,43018592,43018036,43017841,43016307,43014605	43022418,43018799,43018206,43017930,43016548,43016144	Gene ID= ENSG00000108828.15 TPM= 643.34 Transcript Type= protein_coding
chr17	43044295	43125370	43044295	43125370	-	ENST00000357654.7@BRCA1	ENST00000357654.7	protein_coding	43125271,43124017,43115726,43106456,43104868,43104122,43099775,43097244,43095846,43091435,43090944,43082404,43076488,43074331,43070928,43067608,43063874,43063333,43057052,43051063,43049121,43047643,43044295	43125370,43124115,43115779,43106533,43104956,43104261,43099880,43097289,43095922,43094860,43091032,43082575,43076614,43074521,43071238,43067695,43063951,43063373,43057135,43051117,43049194,43047703,43045802	Gene ID= ENSG00000012048.20 TPM= 1.17 Transcript Type= protein_coding
chr17	43125562	43140330	43125562	43140330	+	transcript4211.chr17.nic@NBR2	transcript4211.chr17.nic	transcribed_unprocessed_pseudogene	43125562,43131208,43138657	43125770,43131270,43140330	Gene ID= ENSG00000198496.10 TPM= 9.34 Transcript Type= NA
chr17	43133639	43136117	43133639	43136117	-	transcript4217.chr17.nnic@NA	transcript4217.chr17.nnic	NA	43133639	43136117	Gene ID= novel_gene_chr17_4218 TPM= 2.34 Transcript Type= NA
chr17	43160290	43170403	43160290	43170403	-	ENST00000590740.2@AC060780.1	ENST00000590740.2	lincRNA	43170126,43166980,43160290	43170403,43167262,43164812	Gene ID= ENSG00000267002.2 TPM= 2.34 Transcript Type= lincRNA
chr17	43170488	43211471	43170488	43211471	+	transcript4187.chr17.nic@NBR1	transcript4187.chr17.nic	protein_coding	43170488,43175791,43177936,43179394,43180795,43186250,43189042,43189588,43190609,43191372,43193094,43193348,43194350,43194964,43196481,43196942,43200167,43201686,43202655,43203681,43209901	43170943,43175901,43177998,43179412,43180817,43186444,43189119,43189802,43190776,43191581,43193253,43193638,43194499,43195039,43196591,43197106,43200608,43201780,43202712,43203786,43211471	Gene ID= ENSG00000188554.13 TPM= 15.76 Transcript Type= NA
chr17	43170968	43211471	43170968	43211471	+	transcript4198.chr17.nnic@NBR1	transcript4198.chr17.nnic	protein_coding	43170968,43175791,43177936,43179394,43180795,43186250,43189042,43189588,43190609,43193094,43193348,43194350,43194964,43196481,43196942,43200167,43201686,43202655,43203681,43209901	43171302,43175901,43177998,43179412,43180817,43186444,43189119,43189802,43190776,43193253,43193638,43194499,43195039,43196591,43197106,43200608,43201780,43202712,43203786,43211471	Gene ID= ENSG00000188554.13 TPM= 16.93 Transcript Type= NA
chr17	43211875	43220041	43211875	43220041	+	ENST00000612339.4@TMEM106A	ENST00000612339.4	protein_coding	43211875,43212227,43213021,43213828,43215788,43216449,43216697,43217259,43217681	43211922,43212394,43213252,43213891,43215941,43216589,43216740,43217312,43220041	Gene ID= ENSG00000184988.8 TPM= 8.17 Transcript Type= protein_coding
chr17	43360041	43361361	43360041	43361361	-	ENST00000624705.1@AC109326.1	ENST00000624705.1	TEC	43360041	43361361	Gene ID= ENSG00000279602.1 TPM= 1.17 Transcript Type= TEC
chr17	43375928	43388312	43375928	43388312	-	ENST00000592135.5@LINC00910	ENST00000592135.5	lincRNA	43388289,43381273,43379123,43375928	43388312,43381660,43379262,43377813	Gene ID= ENSG00000188825.13 TPM= 1.17 Transcript Type= lincRNA
chr17	43388386	43389829	43388386	43389829	+	transcript4225.chr17.nnic@NA	transcript4225.chr17.nnic	NA	43388386	43389829	Gene ID= novel_gene_chr17_4226 TPM= 2.34 Transcript Type= NA
chr17	43398959	43401137	43398959	43401137	+	ENST00000320033.4@ARL4D	ENST00000320033.4	protein_coding	43398959,43399661	43399093,43401137	Gene ID= ENSG00000175906.4 TPM= 14.01 Transcript Type= protein_coding
chr17	43483984	43544463	43483984	43544463	+	transcript4231.chr17.nic@DHX8	transcript4231.chr17.nic	protein_coding	43483984,43489449,43490391,43491165,43492183,43492681,43493445,43493683,43496181,43498862,43499956,43504644,43507003,43507503,43507809,43508339,43513362,43517167,43520130,43520751,43521369,43522047,43536412,43544162	43484185,43489534,43490463,43491250,43492292,43493040,43493589,43493886,43496268,43498959,43500103,43504825,43507197,43507688,43508019,43508520,43513502,43517322,43520267,43520879,43521565,43522226,43536498,43544463	Gene ID= ENSG00000067596.10 TPM= 4.67 Transcript Type= NA
chr17	43483995	43524321	43483995	43524321	+	transcript4239.chr17.nic@DHX8	transcript4239.chr17.nic	protein_coding	43483995,43489449,43490391,43491165,43493445,43493683,43496181,43498862,43499956,43504644,43507003,43507503,43507809,43508339,43513362,43517167,43520130,43520751,43521369,43522047,43523628	43484185,43489534,43490463,43493040,43493589,43493886,43496268,43498959,43500103,43504825,43507197,43507688,43508019,43508520,43513502,43517322,43520267,43520879,43521565,43522226,43524321	Gene ID= ENSG00000067596.10 TPM= 5.84 Transcript Type= NA
chr17	43483963	43526786	43483963	43526786	+	ENST00000540306.5@DHX8	ENST00000540306.5	protein_coding	43483963,43489449,43490391,43491165,43492183,43492681,43493445,43493683,43496181,43498862,43499956,43504644,43507003,43507503,43507809,43508339,43513362,43517167,43520130,43520751,43521369,43522047,43526496	43484185,43489534,43490463,43491250,43492292,43493040,43493589,43493886,43496268,43498959,43500103,43504825,43507197,43507688,43508019,43508520,43513502,43517322,43520267,43520879,43521565,43522226,43526786	Gene ID= ENSG00000067596.10 TPM= 1.17 Transcript Type= protein_coding
chr17	43524958	43527180	43524958	43527180	-	transcript4247.chr17.nnic@NA	transcript4247.chr17.nnic	NA	43524958	43527180	Gene ID= novel_gene_chr17_4248 TPM= 5.84 Transcript Type= NA
chr17	43527844	43546432	43527844	43546432	-	ENST00000319349.9@ETV4	ENST00000319349.9	protein_coding	43546185,43545558,43545274,43544975,43536426,43533859,43533187,43532674,43530107,43529884,43529504,43529135,43527844	43546432,43545668,43545367,43545022,43536479,43533985,43533348,43532939,43530181,43529952,43529676,43529236,43528743	Gene ID= ENSG00000175832.12 TPM= 7.01 Transcript Type= protein_coding
chr17	43640388	43661954	43640388	43661954	-	ENST00000318579.8@MEOX1	ENST00000318579.8	protein_coding	43661066,43643488,43640388	43661954,43643660,43642032	Gene ID= ENSG00000005102.12 TPM= 2.34 Transcript Type= protein_coding
chr17	43766131	43778977	43766131	43778977	-	transcript4251.chr17.nic@DUSP3	transcript4251.chr17.nic	protein_coding	43778800,43774712,43769582,43766131	43778977,43774938,43769814,43766784	Gene ID= ENSG00000108861.8 TPM= 4.67 Transcript Type= NA
chr17	43766121	43778988	43766121	43778988	-	ENST00000226004.7@DUSP3	ENST00000226004.7	protein_coding	43778800,43774712,43766121	43778988,43774938,43769814	Gene ID= ENSG00000108861.8 TPM= 120.26 Transcript Type= protein_coding
chr17	43801418	43833170	43801418	43833170	-	ENST00000496503.5@MPP3	ENST00000496503.5	protein_coding	43833101,43832761,43831882,43831559,43831244,43830027,43829654,43827751,43825756,43823931,43820862,43818046,43816038,43814197,43814011,43811112,43810807,43808956,43801418	43833170,43832819,43831943,43831677,43831321,43830107,43829791,43827832,43825841,43824005,43821058,43818110,43816079,43814361,43814091,43811205,43810915,43809078,43801877	Gene ID= ENSG00000161647.18 TPM= 9.34 Transcript Type= nonsense_mediated_decay
chr17	43801418	43816146	43801418	43816146	-	transcript4266.chr17.nic@MPP3	transcript4266.chr17.nic	protein_coding	43814197,43814011,43811112,43810807,43808956,43801418	43816146,43814091,43811205,43810915,43809078,43801877	Gene ID= ENSG00000161647.18 TPM= 5.84 Transcript Type= NA
chr17	43801418	43813990	43801418	43813990	-	transcript4268.chr17.nic@MPP3	transcript4268.chr17.nic	protein_coding	43811112,43810807,43808956,43801418	43813990,43810915,43809078,43801877	Gene ID= ENSG00000161647.18 TPM= 3.5 Transcript Type= NA
chr17	43815988	43822692	43815988	43822692	+	transcript4269.chr17.nnic@NA	transcript4269.chr17.nnic	NA	43815988	43822692	Gene ID= novel_gene_chr17_4270 TPM= 3.5 Transcript Type= NA
chr17	44004546	44009060	44004546	44009060	+	ENST00000293404.7@NAGS	ENST00000293404.7	protein_coding	44004546,44005637,44006024,44006529,44007323,44007591,44008448	44005089,44005911,44006237,44006709,44007494,44007773,44009060	Gene ID= ENSG00000161653.10 TPM= 13.43 Transcript Type= protein_coding
chr17	44006048	44009063	44006048	44009063	+	ENST00000592915.1@NAGS	ENST00000592915.1	protein_coding	44006048,44006529,44007591,44008448	44006237,44007494,44007773,44009063	Gene ID= ENSG00000161653.10 TPM= 2.92 Transcript Type= retained_intron
chr17	44011188	44023151	44011188	44023151	-	ENST00000589334.5@TMEM101	ENST00000589334.5	protein_coding	44023039,44014816,44014357,44013009,44011188	44023151,44015155,44014537,44013155,44012236	Gene ID= ENSG00000091947.9 TPM= 57.21 Transcript Type= protein_coding
chr17	44034635	44067619	44034635	44067619	-	ENST00000591247.5@LSM12	ENST00000591247.5	protein_coding	44067443,44066464,44063801,44040147,44037412,44034635	44067619,44066733,44063934,44040256,44037538,44036300	Gene ID= ENSG00000161654.9 TPM= 33.86 Transcript Type= protein_coding
chr17	44034636	44066735	44034636	44066735	-	ENST00000293406.7@LSM12	ENST00000293406.7	protein_coding	44066464,44063801,44040147,44037412,44034636	44066735,44063934,44040256,44037538,44036300	Gene ID= ENSG00000161654.9 TPM= 23.35 Transcript Type= protein_coding
chr17	44070741	44076344	44070741	44076344	+	transcript4340.chr17.nic@G6PC3	transcript4340.chr17.nic	protein_coding	44070741,44074160,44074680,44075310,44075680	44071183,44074266,44074770,44075451,44076344	Gene ID= ENSG00000141349.8 TPM= 14.01 Transcript Type= NA
chr17	44070751	44076300	44070751	44076300	+	ENST00000585361.5@G6PC3	ENST00000585361.5	protein_coding	44070751,44074160,44074680,44074969,44075310,44075680	44071242,44074266,44074770,44075087,44075451,44076300	Gene ID= ENSG00000141349.8 TPM= 4.67 Transcript Type= nonsense_mediated_decay
chr17	44070735	44076304	44070735	44076304	+	ENST00000269097.8@G6PC3	ENST00000269097.8	protein_coding	44070735,44074160,44074680,44074969,44075310,44075680	44071183,44074266,44074770,44075087,44075451,44076304	Gene ID= ENSG00000141349.8 TPM= 38.53 Transcript Type= protein_coding
chr17	44072629	44076247	44072629	44076247	-	transcript4343.chr17.nnic@NA	transcript4343.chr17.nnic	NA	44072629	44076247	Gene ID= novel_gene_chr17_4344 TPM= 12.84 Transcript Type= NA
chr17	44078294	44123660	44078294	44123660	-	transcript4305.chr17.nic@HDAC5	transcript4305.chr17.nic	protein_coding	44123504,44117494,44110729,44093575,44093314,44093092,44092676,44092381,44092172,44091700,44091270,44088387,44087412,44086572,44085022,44084555,44083805,44083545,44082765,44082585,44080763,44080401,44080107,44079144,44078795,44078500,44078294	44123660,44117704,44110800,44093834,44093485,44093206,44092806,44092527,44092284,44091831,44091492,44088598,44087696,44086737,44085155,44084675,44083854,44083652,44082820,44082672,44080882,44080498,44080225,44079277,44078879,44078665,44078415	Gene ID= ENSG00000108840.15 TPM= 46.7 Transcript Type= NA
chr17	44078294	44123663	44078294	44123663	-	transcript4307.chr17.nic@HDAC5	transcript4307.chr17.nic	protein_coding	44123254,44117494,44110729,44093575,44093314,44093092,44092676,44092381,44092172,44091700,44091270,44088387,44087412,44086572,44085022,44084555,44083805,44083545,44082765,44082585,44080763,44080401,44080107,44079144,44078795,44078500,44078294	44123663,44117704,44110803,44093834,44093485,44093206,44092806,44092527,44092284,44091831,44091492,44088598,44087696,44086737,44085155,44084675,44083854,44083652,44082820,44082672,44080882,44080498,44080225,44079277,44078879,44078665,44078415	Gene ID= ENSG00000108840.15 TPM= 9.34 Transcript Type= NA
chr17	44078294	44111236	44078294	44111236	-	transcript4323.chr17.nic@HDAC5	transcript4323.chr17.nic	protein_coding	44110729,44093575,44093314,44093092,44092676,44092381,44092172,44091700,44091270,44088387,44087412,44086572,44085022,44084555,44083805,44083545,44082765,44082585,44080763,44080401,44080107,44079144,44078795,44078500,44078294	44111236,44093834,44093485,44093206,44092806,44092527,44092284,44091831,44091492,44088598,44087696,44086737,44085155,44084675,44083854,44083652,44082820,44082672,44080882,44080498,44080225,44079277,44078879,44078665,44078415	Gene ID= ENSG00000108840.15 TPM= 9.34 Transcript Type= NA
chr17	44078294	44123663	44078294	44123663	-	transcript4325.chr17.nnic@HDAC5	transcript4325.chr17.nnic	protein_coding	44123254,44117494,44110729,44093575,44093314,44093092,44092676,44092381,44092172,44091700,44091270,44088387,44087412,44086572,44085022,44084555,44083805,44083545,44080763,44080401,44080107,44079144,44078795,44078500,44078294	44123663,44117704,44110800,44093834,44093485,44093206,44092806,44092527,44092284,44091831,44091492,44088598,44087696,44086737,44085155,44084675,44083854,44083652,44080882,44080498,44080225,44079277,44078879,44078665,44078415	Gene ID= ENSG00000108840.15 TPM= 7.01 Transcript Type= NA
chr17	44076746	44123638	44076746	44123638	-	ENST00000225983.10@HDAC5	ENST00000225983.10	protein_coding	44123504,44117494,44110729,44093575,44093314,44093092,44092676,44092381,44092172,44091700,44091270,44088387,44087412,44086572,44085022,44084555,44083805,44083545,44082765,44082585,44080763,44080401,44080107,44079144,44078795,44078500,44076746	44123638,44117704,44110803,44093834,44093485,44093206,44092806,44092527,44092284,44091831,44091492,44088598,44087696,44086737,44085155,44084675,44083854,44083652,44082820,44082672,44080882,44080498,44080225,44079277,44078879,44078665,44078415	Gene ID= ENSG00000108840.15 TPM= 14.59 Transcript Type= protein_coding
chr17	44076754	44123618	44076754	44123618	-	ENST00000336057.9@HDAC5	ENST00000336057.9	protein_coding	44123504,44117494,44110729,44093575,44093314,44093092,44092676,44092381,44092172,44091700,44091270,44088387,44087412,44086572,44083805,44083545,44082765,44082585,44080763,44080401,44080107,44079144,44078795,44078500,44076754	44123618,44117704,44110800,44093834,44093485,44093206,44092806,44092527,44092284,44091831,44091492,44088598,44087696,44086737,44083854,44083652,44082820,44082672,44080882,44080498,44080225,44079277,44078879,44078665,44078415	Gene ID= ENSG00000108840.15 TPM= 2.92 Transcript Type= protein_coding
chr17	44078294	44123275	44078294	44123275	-	ENST00000586802.5@HDAC5	ENST00000586802.5	protein_coding	44123254,44117494,44110729,44093575,44093314,44093092,44092676,44092381,44092172,44091700,44091270,44088387,44087412,44086572,44085022,44084555,44083805,44083545,44082765,44082585,44080763,44080401,44080107,44079144,44078795,44078500,44078294	44123275,44117704,44110800,44093834,44093485,44093206,44092806,44092527,44092284,44091831,44091492,44088598,44087696,44086737,44085155,44084675,44083854,44083652,44082820,44082672,44080882,44080498,44080225,44079277,44078879,44078665,44078415	Gene ID= ENSG00000108840.15 TPM= 117.93 Transcript Type= protein_coding
chr17	44141906	44162476	44141906	44162476	+	ENST00000319977.8@C17orf53	ENST00000319977.8	protein_coding	44141906,44145203,44147858,44150961,44152637,44154553,44154853,44155286,44157833,44161871	44142145,44145253,44149027,44151044,44152777,44154664,44154938,44155411,44157941,44162476	Gene ID= ENSG00000125319.14 TPM= 1.17 Transcript Type= protein_coding
chr17	44175973	44186671	44175973	44186671	-	ENST00000585457.5@ASB16-AS1	ENST00000585457.5	antisense_RNA	44186565,44182930,44181623,44175973	44186671,44183093,44181720,44177816	Gene ID= ENSG00000267080.5 TPM= 5.84 Transcript Type= antisense_RNA
chr17	44186983	44191725	44186983	44191725	+	transcript4392.chr17.nic@TMUB2	transcript4392.chr17.nic	protein_coding	44186983,44187907,44188935,44189424,44190501	44187743,44188009,44189299,44189588,44191725	Gene ID= ENSG00000168591.15 TPM= 4.09 Transcript Type= NA
chr17	44187218	44191691	44187218	44191691	+	transcript4393.chr17.nic@TMUB2	transcript4393.chr17.nic	protein_coding	44187218,44187907,44188935,44190501,44191106	44187743,44188009,44189588,44190886,44191691	Gene ID= ENSG00000168591.15 TPM= 2.48 Transcript Type= NA
chr17	44186984	44191725	44186984	44191725	+	transcript4394.chr17.nic@TMUB2	transcript4394.chr17.nic	protein_coding	44186984,44187676,44187907,44188935,44190501	44187109,44187743,44188009,44189588,44191725	Gene ID= ENSG00000168591.15 TPM= 5.64 Transcript Type= NA
chr17	44187209	44191691	44187209	44191691	+	transcript4401.chr17.nic@TMUB2	transcript4401.chr17.nic	protein_coding	44187209,44189022,44190501,44191106	44187431,44189588,44190886,44191691	Gene ID= ENSG00000168591.15 TPM= 2.48 Transcript Type= NA
chr17	44186986	44191730	44186986	44191730	+	ENST00000357984.7@TMUB2	ENST00000357984.7	protein_coding	44186986,44189022,44190501	44187109,44189588,44191730	Gene ID= ENSG00000168591.15 TPM= 9.73 Transcript Type= protein_coding
chr17	44187223	44191731	44187223	44191731	+	transcript4411.chr17.nic@TMUB2	transcript4411.chr17.nic	protein_coding	44187223,44188935,44190501	44187743,44189299,44191731	Gene ID= ENSG00000168591.15 TPM= 2.34 Transcript Type= NA
chr17	44187209	44191725	44187209	44191725	+	transcript4413.chr17.nic@TMUB2	transcript4413.chr17.nic	protein_coding	44187209,44189022,44190501	44187431,44189588,44191725	Gene ID= ENSG00000168591.15 TPM= 9.14 Transcript Type= NA
chr17	44187210	44191928	44187210	44191928	+	transcript4414.chr17.nic@TMUB2	transcript4414.chr17.nic	protein_coding	44187210,44189022,44190501	44187743,44189299,44191928	Gene ID= ENSG00000168591.15 TPM= 2.34 Transcript Type= NA
chr17	44187210	44191725	44187210	44191725	+	transcript4415.chr17.nic@TMUB2	transcript4415.chr17.nic	protein_coding	44187210,44189022,44190501	44187743,44189588,44191725	Gene ID= ENSG00000168591.15 TPM= 9.14 Transcript Type= NA
chr17	44187206	44191726	44187206	44191726	+	ENST00000319511.6@TMUB2	ENST00000319511.6	protein_coding	44187206,44188935,44190501	44187743,44189588,44191726	Gene ID= ENSG00000168591.15 TPM= 14.38 Transcript Type= protein_coding
chr17	44187262	44191712	44187262	44191712	+	ENST00000589785.1@TMUB2	ENST00000589785.1	protein_coding	44187262,44189022,44190501	44187400,44189588,44191712	Gene ID= ENSG00000168591.15 TPM= 1.31 Transcript Type= protein_coding
chr17	44191807	44199726	44191807	44199726	-	transcript4381.chr17.nnic@ATXN7L3	transcript4381.chr17.nnic	protein_coding	44199496,44198020,44197598,44197228,44196929,44196396,44196034,44195800,44195419,44195097,44194768,44194517,44192618,44191807	44199726,44198130,44197730,44197399,44197026,44196418,44196079,44195828,44195487,44195140,44194839,44194674,44194411,44192435	Gene ID= ENSG00000087152.15 TPM= 7.3 Transcript Type= NA
chr17	44191805	44199369	44191805	44199369	-	transcript4382.chr17.nnic@ATXN7L3	transcript4382.chr17.nnic	protein_coding	44198020,44197598,44197228,44196929,44196396,44196034,44195800,44195419,44195097,44194768,44194517,44193316,44191805	44199369,44197730,44197399,44197026,44196418,44196079,44195828,44195487,44195140,44194839,44194674,44194411,44192435	Gene ID= ENSG00000087152.15 TPM= 3.79 Transcript Type= NA
chr17	44191805	44199884	44191805	44199884	-	transcript4385.chr17.nic@ATXN7L3	transcript4385.chr17.nic	protein_coding	44199496,44198020,44197598,44197228,44196929,44196396,44196034,44195800,44195419,44195097,44194768,44194517,44191805	44199884,44198130,44197730,44197399,44197026,44196418,44196100,44195828,44195487,44195140,44194839,44194674,44194411	Gene ID= ENSG00000087152.15 TPM= 19.56 Transcript Type= NA
chr17	44191805	44199652	44191805	44199652	-	transcript4386.chr17.nic@ATXN7L3	transcript4386.chr17.nic	protein_coding	44199496,44198020,44197598,44197228,44196929,44196396,44196034,44195800,44195419,44195097,44194768,44194517,44191805	44199652,44198130,44197730,44197399,44197026,44196418,44196100,44195885,44195487,44195140,44194839,44194674,44194411	Gene ID= ENSG00000087152.15 TPM= 18.39 Transcript Type= NA
chr17	44199679	44201042	44199679	44201042	+	transcript4421.chr17.nnic@NA	transcript4421.chr17.nnic	NA	44199679	44201042	Gene ID= novel_gene_chr17_4422 TPM= 2.34 Transcript Type= NA
chr17	44206594	44219159	44206594	44219159	-	transcript4363.chr17.nnic@UBTF	transcript4363.chr17.nnic	protein_coding	44218965,44218172,44216529,44215906,44215654,44213218,44212819,44212344,44211873,44211606,44211290,44211039,44210792,44210318,44210124,44209645,44209352,44207864,44207699,44207454,44206594	44219159,44218296,44216704,44215989,44215809,44213282,44212939,44212454,44212006,44211747,44211331,44211152,44210947,44210473,44210234,44209733,44209541,44207911,44207770,44207597,44207367	Gene ID= ENSG00000108312.14 TPM= 3.5 Transcript Type= NA
chr17	44206594	44221035	44206594	44221035	-	transcript4365.chr17.nic@UBTF	transcript4365.chr17.nic	protein_coding	44220740,44218172,44216529,44215906,44215654,44213218,44212819,44212344,44211873,44211606,44211290,44211039,44210792,44210318,44210124,44209645,44209352,44207864,44207699,44207454,44206594	44221035,44218296,44216704,44215989,44215809,44213282,44212939,44212454,44212006,44211747,44211331,44211152,44210947,44210473,44210234,44209733,44209541,44207911,44207770,44207597,44207367	Gene ID= ENSG00000108312.14 TPM= 8.17 Transcript Type= NA
chr17	44205033	44221626	44205033	44221626	-	ENST00000302904.8@UBTF	ENST00000302904.8	protein_coding	44221201,44218172,44216529,44215906,44215654,44213218,44212819,44212344,44211873,44211606,44211290,44211039,44210792,44210318,44210124,44209645,44209352,44207864,44207699,44207454,44205033	44221626,44218296,44216704,44215989,44215809,44213282,44212939,44212454,44212006,44211747,44211331,44211152,44210947,44210473,44210234,44209733,44209541,44207911,44207770,44207597,44207367	Gene ID= ENSG00000108312.14 TPM= 11.68 Transcript Type= protein_coding
chr17	44206594	44219081	44206594	44219081	-	transcript4368.chr17.nnic@UBTF	transcript4368.chr17.nnic	protein_coding	44218965,44218172,44216529,44215906,44215654,44213218,44212819,44211873,44211606,44211290,44211039,44210792,44210318,44210124,44209645,44209352,44207864,44207699,44207454,44206594	44219081,44218296,44216704,44215989,44215809,44213282,44212939,44212006,44211747,44211331,44211152,44210947,44210473,44210234,44209733,44209541,44207911,44207770,44207597,44207367	Gene ID= ENSG00000108312.14 TPM= 8.96 Transcript Type= NA
chr17	44206594	44221311	44206594	44221311	-	transcript4373.chr17.nic@UBTF	transcript4373.chr17.nic	protein_coding	44221201,44218172,44216529,44215906,44215654,44213218,44212819,44211873,44211606,44211290,44211039,44210792,44210318,44210124,44209645,44209352,44207864,44207699,44207454,44206594	44221311,44218296,44216704,44215989,44215809,44213282,44212939,44212006,44211747,44211331,44211152,44210947,44210473,44210234,44209733,44209541,44207911,44207770,44207597,44207367	Gene ID= ENSG00000108312.14 TPM= 8.96 Transcript Type= NA
chr17	44206594	44220854	44206594	44220854	-	ENST00000527034.5@UBTF	ENST00000527034.5	protein_coding	44220740,44218172,44216529,44215906,44215654,44213218,44212819,44211873,44211606,44211290,44211039,44210792,44210318,44210124,44209645,44209352,44207864,44207703,44207454,44206594	44220854,44218296,44216704,44215989,44215809,44213282,44212939,44212006,44211747,44211331,44211152,44210947,44210473,44210234,44209733,44209541,44207911,44207770,44207597,44207367	Gene ID= ENSG00000108312.14 TPM= 29.19 Transcript Type= protein_coding
chr17	44207116	44219750	44207116	44219750	-	ENST00000393606.7@UBTF	ENST00000393606.7	protein_coding	44219445,44218172,44216529,44215906,44215654,44213218,44212819,44211873,44211606,44211290,44211039,44210792,44210318,44210124,44209645,44209352,44207864,44207699,44207454,44207116	44219750,44218296,44216704,44215989,44215809,44213282,44212939,44212006,44211747,44211331,44211152,44210947,44210473,44210234,44209733,44209541,44207911,44207770,44207597,44207367	Gene ID= ENSG00000108312.14 TPM= 4.67 Transcript Type= protein_coding
chr17	44319625	44324870	44319625	44324870	-	ENST00000225308.12@SLC25A39	ENST00000225308.12	protein_coding	44324711,44323478,44323284,44322808,44322419,44321700,44321434,44321058,44320622,44320355,44320196,44319625	44324870,44323577,44323343,44322852,44322528,44321767,44321558,44321231,44320731,44320436,44320276,44320116	Gene ID= ENSG00000013306.15 TPM= 160.1 Transcript Type= protein_coding
chr17	44319627	44324859	44319627	44324859	-	transcript4432.chr17.nic@SLC25A39	transcript4432.chr17.nic	protein_coding	44323478,44323284,44322808,44322419,44321700,44321434,44321058,44320622,44320355,44320196,44319627	44324859,44323343,44322852,44322528,44321767,44321558,44321231,44320731,44320436,44320276,44320116	Gene ID= ENSG00000013306.15 TPM= 18.24 Transcript Type= NA
chr17	44319627	44324147	44319627	44324147	-	ENST00000591006.5@SLC25A39	ENST00000591006.5	protein_coding	44323478,44323284,44322808,44322419,44321700,44321058,44320622,44320355,44320196,44319627	44324147,44323343,44322852,44322528,44321767,44321558,44320731,44320436,44320276,44320116	Gene ID= ENSG00000013306.15 TPM= 7.64 Transcript Type= retained_intron
chr17	44319636	44324815	44319636	44324815	-	ENST00000377095.9@SLC25A39	ENST00000377095.9	protein_coding	44324711,44323478,44323284,44322808,44322419,44321700,44321434,44321058,44320622,44320355,44320196,44319636	44324815,44323577,44323343,44322852,44322552,44321767,44321558,44321231,44320731,44320436,44320276,44320116	Gene ID= ENSG00000013306.15 TPM= 33.08 Transcript Type= protein_coding
chr17	44319642	44324809	44319642	44324809	-	ENST00000590194.5@SLC25A39	ENST00000590194.5	protein_coding	44324711,44323478,44323284,44322808,44322419,44321700,44321434,44321058,44320622,44320355,44320196,44319642	44324809,44323590,44323343,44322852,44322528,44321767,44321558,44321231,44320731,44320436,44320276,44320116	Gene ID= ENSG00000013306.15 TPM= 4.96 Transcript Type= protein_coding
chr17	44345086	44353102	44345086	44353102	+	ENST00000053867.7@GRN	ENST00000053867.7	protein_coding	44345086,44349158,44349426,44349667,44350228,44350442,44350691,44351037,44351363,44351550,44352015,44352341,44352661	44345334,44349302,44349551,44349751,44350340,44350577,44350800,44351163,44351460,44351795,44352248,44352571,44353102	Gene ID= ENSG00000030582.17 TPM= 1711.74 Transcript Type= protein_coding
chr17	44353215	44363875	44353215	44363875	-	ENST00000293443.11@FAM171A2	ENST00000293443.11	protein_coding	44363597,44359905,44359579,44356430,44356173,44355958,44355715,44353215	44363875,44360132,44359671,44356588,44356352,44356074,44355841,44355191	Gene ID= ENSG00000161682.14 TPM= 3.5 Transcript Type= protein_coding
chr17	44557459	44559570	44557459	44559570	+	ENST00000315323.4@FZD2	ENST00000315323.4	protein_coding	44557459	44559570	Gene ID= ENSG00000180340.6 TPM= 9.34 Transcript Type= protein_coding
chr17	44677440	44689779	44677440	44689779	-	ENST00000457422.6@CCDC43	ENST00000457422.6	protein_coding	44689550,44683872,44682003,44677440	44689779,44683959,44682138,44679043	Gene ID= ENSG00000180329.13 TPM= 9.34 Transcript Type= protein_coding
chr17	44677458	44689762	44677458	44689762	-	ENST00000315286.12@CCDC43	ENST00000315286.12	protein_coding	44689550,44683872,44682003,44680585,44677458	44689762,44683959,44682138,44680643,44679043	Gene ID= ENSG00000180329.13 TPM= 25.69 Transcript Type= protein_coding
chr17	44749942	44750538	44749942	44750538	+	transcript4554.chr17.nnic@NA	transcript4554.chr17.nnic	NA	44749942	44750538	Gene ID= novel_gene_chr17_4555 TPM= 2.34 Transcript Type= NA
chr17	44798448	44830811	44798448	44830811	-	ENST00000426548.5@GJC1	ENST00000426548.5	protein_coding	44830638,44807394,44798448	44830811,44807469,44805837	Gene ID= ENSG00000182963.9 TPM= 3.5 Transcript Type= protein_coding
chr17	44804247	44830231	44804247	44830231	-	ENST00000592524.5@GJC1	ENST00000592524.5	protein_coding	44830062,44807394,44804247	44830231,44807469,44805837	Gene ID= ENSG00000182963.9 TPM= 1.17 Transcript Type= protein_coding
chr17	44823718	44824693	44823718	44824693	-	transcript4567.chr17.nnic@NA	transcript4567.chr17.nnic	NA	44823718	44824693	Gene ID= novel_gene_chr17_4568 TPM= 2.34 Transcript Type= NA
chr17	44846327	44850476	44846327	44850476	+	transcript4577.chr17.nnic@HIGD1B	transcript4577.chr17.nnic	protein_coding	44846327,44848102,44849254,44850332	44846426,44848252,44849388,44850476	Gene ID= ENSG00000131097.6 TPM= 2.34 Transcript Type= NA
chr17	44847892	44850476	44847892	44850476	+	transcript4579.chr17.nnic@HIGD1B	transcript4579.chr17.nnic	protein_coding	44847892,44848102,44849106,44850332	44848017,44848252,44849388,44850476	Gene ID= ENSG00000131097.6 TPM= 2.34 Transcript Type= NA
chr17	44846353	44850476	44846353	44850476	+	ENST00000591513.5@HIGD1B	ENST00000591513.5	protein_coding	44846353,44848060,44849254,44850332	44846426,44848252,44849388,44850476	Gene ID= ENSG00000131097.6 TPM= 2.34 Transcript Type= protein_coding
chr17	44847902	44850480	44847902	44850480	+	ENST00000253410.2@HIGD1B	ENST00000253410.2	protein_coding	44847902,44849254,44850332	44848252,44849388,44850480	Gene ID= ENSG00000131097.6 TPM= 1.17 Transcript Type= protein_coding
chr17	44849943	44899662	44849943	44899662	-	ENST00000426333.6@EFTUD2	ENST00000426333.6	protein_coding	44899369,44894417,44886585,44885256,44883649,44883093,44881687,44880554,44879556,44875934,44872446,44868287,44867807,44864930,44863655,44862713,44860432,44859905,44859080,44857075,44854918,44854556,44854269,44853517,44853296,44852409,44851710,44849943	44899662,44894525,44886750,44885334,44883724,44883158,44881722,44880644,44879638,44876100,44872570,44868350,44867897,44865065,44863782,44862906,44860543,44860045,44859181,44857157,44855004,44854682,44854356,44853635,44853390,44852562,44851817,44851369	Gene ID= ENSG00000108883.12 TPM= 15.18 Transcript Type= protein_coding
chr17	44850916	44899451	44850916	44899451	-	transcript4573.chr17.nic@EFTUD2	transcript4573.chr17.nic	protein_coding	44899369,44894417,44886585,44885256,44883649,44883093,44881687,44880554,44879556,44875934,44872446,44868287,44867807,44864930,44863655,44862713,44860432,44859905,44859080,44857075,44854918,44854556,44853517,44853296,44852409,44851710,44850916	44899451,44894525,44886750,44885334,44883724,44883158,44881722,44880644,44879638,44876100,44872570,44868350,44867897,44865065,44863782,44862906,44860543,44860045,44859181,44857157,44855004,44854682,44854356,44853390,44852562,44851817,44851369	Gene ID= ENSG00000108883.12 TPM= 5.84 Transcript Type= NA
chr17	44850866	44899431	44850866	44899431	-	ENST00000592576.5@EFTUD2	ENST00000592576.5	protein_coding	44899369,44894417,44886585,44885256,44883649,44883093,44881687,44880554,44879556,44875934,44872446,44868287,44867807,44864930,44863655,44862713,44860432,44859905,44859080,44857075,44854918,44854556,44854269,44853517,44853296,44852409,44851710,44850866	44899431,44894525,44886750,44885334,44883724,44883128,44881722,44880644,44879638,44876100,44872570,44868350,44867897,44865065,44863782,44862906,44860543,44860045,44859181,44857157,44855004,44854682,44854356,44853635,44853390,44852562,44851817,44851369	Gene ID= ENSG00000108883.12 TPM= 142.45 Transcript Type= protein_coding
chr17	45023346	45051661	45023346	45051661	-	transcript4585.chr17.nnic@DCAKD	transcript4585.chr17.nnic	protein_coding	45051553,45034774,45034187,45033935,45030092,45023346	45051661,45034999,45034390,45034042,45030179,45024724	Gene ID= ENSG00000172992.11 TPM= 6.42 Transcript Type= NA
chr17	45023346	45061109	45023346	45061109	-	ENST00000310604.8@DCAKD	ENST00000310604.8	protein_coding	45060888,45034774,45034187,45030092,45023346	45061109,45035002,45034390,45030179,45024724	Gene ID= ENSG00000172992.11 TPM= 15.76 Transcript Type= protein_coding
chr17	45061304	45105986	45061304	45105986	+	transcript4590.chr17.nnic@NMT1	transcript4590.chr17.nnic	protein_coding	45061304,45081644,45086508,45093685,45096194,45097128,45098382,45099405,45102951,45103709,45104121,45104859,45105619	45061460,45081752,45086652,45093803,45096285,45097244,45098552,45099513,45103121,45103876,45104224,45104996,45105986	Gene ID= ENSG00000136448.11 TPM= 3.12 Transcript Type= NA
chr17	45051610	45109016	45051610	45109016	+	ENST00000592782.5@NMT1	ENST00000592782.5	protein_coding	45051610,45061283,45081644,45086508,45093685,45096194,45097128,45098382,45099405,45102951,45103709,45104859,45105619	45051693,45061460,45081752,45086652,45093803,45096285,45097244,45098552,45099513,45103121,45103876,45104996,45109016	Gene ID= ENSG00000136448.11 TPM= 102.36 Transcript Type= protein_coding
chr17	45061304	45105986	45061304	45105986	+	transcript4594.chr17.nic@NMT1	transcript4594.chr17.nic	protein_coding	45061304,45081644,45086508,45093685,45096194,45097128,45098382,45099405,45102951,45103709,45105619	45061460,45081752,45086652,45093803,45096285,45097244,45098552,45099513,45103121,45104996,45105986	Gene ID= ENSG00000136448.11 TPM= 3.12 Transcript Type= NA
chr17	45132600	45144172	45132600	45144172	+	ENST00000431281.5@ACBD4	ENST00000431281.5	protein_coding	45132600,45135341,45135842,45136108,45136500,45136692,45137019,45137368,45137722,45137913,45139021,45143443	45132663,45135596,45135953,45136232,45136620,45136776,45137139,45137454,45137830,45137988,45139160,45144172	Gene ID= ENSG00000181513.14 TPM= 4.67 Transcript Type= protein_coding
chr17	45132613	45144176	45132613	45144176	+	transcript4605.chr17.nic@ACBD4	transcript4605.chr17.nic	protein_coding	45132613,45135341,45135839,45136108,45136500,45136692,45137019,45137368,45137760,45137913,45139021,45143443	45132663,45135592,45135953,45136232,45136620,45136776,45137139,45137454,45137830,45137988,45139160,45144176	Gene ID= ENSG00000181513.14 TPM= 4.09 Transcript Type= NA
chr17	45136069	45142963	45136069	45142963	+	transcript4608.chr17.nnic@ACBD4	transcript4608.chr17.nnic	protein_coding	45136069,45136500,45136692,45137019,45137368,45137722,45137913,45139021,45142577	45136232,45136620,45136776,45137139,45137454,45137830,45137988,45139160,45142963	Gene ID= ENSG00000181513.14 TPM= 2.34 Transcript Type= NA
chr17	45135694	45142959	45135694	45142959	+	ENST00000376955.8@ACBD4	ENST00000376955.8	protein_coding	45135694,45136108,45136500,45136692,45137019,45137368,45137760,45137923,45139021,45142583	45135953,45136232,45136620,45136776,45137139,45137454,45137830,45137988,45139160,45142959	Gene ID= ENSG00000181513.14 TPM= 1.17 Transcript Type= protein_coding
chr17	45135708	45144176	45135708	45144176	+	ENST00000321854.12@ACBD4	ENST00000321854.12	protein_coding	45135708,45136108,45136500,45136692,45137019,45137368,45137760,45137913,45139021,45143443	45135953,45136232,45136620,45136776,45137139,45137454,45137830,45137988,45139160,45144176	Gene ID= ENSG00000181513.14 TPM= 11.09 Transcript Type= protein_coding
chr17	45148502	45152101	45148502	45152101	+	ENST00000332499.3@HEXIM1	ENST00000332499.3	protein_coding	45148502	45152101	Gene ID= ENSG00000186834.3 TPM= 86.4 Transcript Type= protein_coding
chr17	45160204	45161538	45160204	45161538	-	transcript4627.chr17.nnic@NA	transcript4627.chr17.nnic	NA	45160204	45161538	Gene ID= novel_gene_chr17_4628 TPM= 2.34 Transcript Type= NA
chr17	45160700	45170040	45160700	45170040	+	ENST00000307275.7@HEXIM2	ENST00000307275.7	protein_coding	45160700,45162488,45162750,45169015	45160943,45162635,45162859,45170040	Gene ID= ENSG00000168517.10 TPM= 3.5 Transcript Type= protein_coding
chr17	45161883	45170035	45161883	45170035	+	transcript4616.chr17.nic@HEXIM2	transcript4616.chr17.nic	protein_coding	45161883,45162750,45169015	45162635,45162859,45170035	Gene ID= ENSG00000168517.10 TPM= 2.34 Transcript Type= NA
chr17	45216799	45222265	45216799	45222265	-	transcript4642.chr17.nnic@AC008105.3	transcript4642.chr17.nnic	antisense_RNA	45220268,45218948,45216799	45222265,45219174,45217403	Gene ID= ENSG00000267121.5 TPM= 4.67 Transcript Type= NA
chr17	45219350	45222222	45219350	45222222	-	ENST00000591365.1@AC008105.3	ENST00000591365.1	antisense_RNA	45220268,45219350	45222222,45219632	Gene ID= ENSG00000267121.5 TPM= 1.17 Transcript Type= antisense_RNA
chr17	45219730	45222036	45219730	45222036	-	transcript4646.chr17.nnic@AC008105.3	transcript4646.chr17.nnic	antisense_RNA	45220268,45219730	45222036,45220075	Gene ID= ENSG00000267121.5 TPM= 2.34 Transcript Type= NA
chr17	45221885	45247318	45221885	45247318	+	transcript4632.chr17.nic@FMNL1	transcript4632.chr17.nic	protein_coding	45221885,45230604,45232367,45233224,45233648,45234072,45236136,45237281,45237546,45238564,45238955,45240476,45241129,45241382,45241847,45242341,45243118,45243791,45244176,45244819,45244979,45245253,45245632,45245878,45246210,45246867	45222253,45230687,45232480,45233297,45233731,45234200,45236244,45237357,45237639,45238638,45239065,45240625,45241230,45241634,45242146,45242465,45243320,45244025,45244244,45244899,45245108,45245416,45245733,45245973,45246330,45247318	Gene ID= ENSG00000184922.13 TPM= 35.03 Transcript Type= NA
chr17	45222067	45234687	45222067	45234687	+	transcript4636.chr17.nic@FMNL1	transcript4636.chr17.nic	protein_coding	45222067,45230604,45232367,45233224,45233648	45222253,45230687,45232450,45233297,45234687	Gene ID= ENSG00000184922.13 TPM= 4.67 Transcript Type= NA
chr17	45288380	45317062	45288380	45317062	-	transcript4658.chr17.nic@MAP3K14	transcript4658.chr17.nic	protein_coding	45316960,45288380	45317062,45290765	Gene ID= ENSG00000006062.14 TPM= 3.5 Transcript Type= NA
chr17	45263121	45317040	45263121	45317040	-	ENST00000344686.6@MAP3K14	ENST00000344686.6	protein_coding	45316960,45290490,45289236,45287154,45286431,45284812,45274464,45274123,45273503,45271058,45270413,45267406,45267092,45266537,45265163,45263121	45317040,45290765,45289305,45287364,45287045,45284949,45274593,45274254,45273607,45271221,45270563,45267759,45267198,45266681,45265263,45264800	Gene ID= ENSG00000006062.14 TPM= 21.02 Transcript Type= protein_coding
chr17	45393909	45431954	45393909	45431954	-	transcript4663.chr17.nic@ARHGAP27	transcript4663.chr17.nic	protein_coding	45431621,45429623,45405676,45404924,45404601,45404445,45404269,45404029,45403619,45402714,45397949,45396916,45396668,45396487,45396207,45395983,45395744,45393909	45431954,45430297,45406083,45405106,45404681,45404528,45404334,45404096,45403709,45402818,45398047,45397024,45396790,45396585,45396284,45396117,45395849,45395633	Gene ID= ENSG00000159314.11 TPM= 11.16 Transcript Type= NA
chr17	45393909	45410420	45393909	45410420	-	transcript4665.chr17.nic@ARHGAP27	transcript4665.chr17.nic	protein_coding	45410232,45405676,45404924,45404601,45404445,45404269,45404029,45403619,45402714,45397949,45396916,45396668,45396487,45396207,45395983,45395744,45393909	45410420,45406083,45405106,45404681,45404528,45404334,45404096,45403709,45402818,45398047,45397024,45396790,45396585,45396284,45396117,45395849,45395633	Gene ID= ENSG00000159314.11 TPM= 14.66 Transcript Type= NA
chr17	45393902	45410424	45393902	45410424	-	ENST00000532038.5@ARHGAP27	ENST00000532038.5	protein_coding	45410232,45405676,45404924,45404601,45404445,45404029,45403619,45402714,45397949,45396916,45396668,45396487,45396207,45395983,45395744,45393902	45410424,45406083,45405106,45404681,45404528,45404096,45403709,45402818,45398047,45397024,45396790,45396585,45396284,45396117,45395849,45395633	Gene ID= ENSG00000159314.11 TPM= 21.16 Transcript Type= protein_coding
chr17	45393902	45430297	45393902	45430297	-	ENST00000428638.5@ARHGAP27	ENST00000428638.5	protein_coding	45429623,45405676,45404924,45404601,45404445,45404269,45404029,45403619,45402714,45397949,45396916,45396668,45396487,45396207,45395983,45395744,45393902	45430297,45406083,45405106,45404681,45404528,45404334,45404096,45403709,45402818,45398047,45397024,45396790,45396585,45396284,45396117,45395849,45395633	Gene ID= ENSG00000159314.11 TPM= 17 Transcript Type= protein_coding
chr17	45393909	45425631	45393909	45425631	-	ENST00000376922.6@ARHGAP27	ENST00000376922.6	protein_coding	45425564,45405676,45404924,45404601,45404445,45404269,45404029,45403619,45402714,45397949,45396916,45396668,45396487,45396207,45395983,45395744,45393909	45425631,45406083,45405106,45404681,45404528,45404334,45404096,45403709,45402818,45398047,45397024,45396790,45396585,45396284,45396117,45395849,45395633	Gene ID= ENSG00000159314.11 TPM= 18.17 Transcript Type= protein_coding
chr17	45429353	45432916	45429353	45432916	-	ENST00000290470.3@ARHGAP27	ENST00000290470.3	protein_coding	45432752,45432216,45431621,45429353	45432916,45432349,45431752,45430297	Gene ID= ENSG00000159314.11 TPM= 5.84 Transcript Type= protein_coding
chr17	45505176	45507180	45505176	45507180	-	transcript4694.chr17.nnic@NA	transcript4694.chr17.nnic	NA	45505176	45507180	Gene ID= novel_gene_chr17_4695 TPM= 3.5 Transcript Type= NA
chr17	45620610	45637959	45620610	45637959	+	ENST00000455565.5@LINC02210	ENST00000455565.5	transcribed_unitary_pseudogene	45620610,45621908,45629904,45636283	45621152,45622041,45630158,45637959	Gene ID= ENSG00000204650.14 TPM= 3.5 Transcript Type= processed_transcript
chr17	46049241	46193382	46049241	46193382	-	transcript4704.chr17.nic@KANSL1	transcript4704.chr17.nic	protein_coding	46192823,46170855,46094560,46082441,46067549,46066537,46049241	46193382,46172232,46094701,46082542,46067667,46066732,46050704	Gene ID= ENSG00000120071.13 TPM= 5.25 Transcript Type= NA
chr17	46168352	46192889	46168352	46192889	-	transcript4709.chr17.nic@KANSL1	transcript4709.chr17.nic	protein_coding	46192823,46168352	46192889,46172232	Gene ID= ENSG00000120071.13 TPM= 2.92 Transcript Type= NA
chr17	46295131	46337794	46295131	46337794	+	ENST00000320254.5@LRRC37A	ENST00000320254.5	protein_coding	46295131,46299794,46302638,46305509,46306229,46322322,46322953,46328392,46330450,46332552,46335545,46337296,46337429,46337675	46297742,46299865,46302709,46305580,46306309,46322393,46323027,46328510,46331981,46332656,46335594,46337350,46337568,46337794	Gene ID= ENSG00000176681.14 TPM= 2.34 Transcript Type= protein_coding
chr17	46372803	46555643	46372803	46555643	+	transcript4716.chr17.nnic@AC217777.1	transcript4716.chr17.nnic	unprocessed_pseudogene	46372803,46406664,46409034,46412831,46419798,46422477,46423066,46425527,46456707,46475200,46476144,46476772,46487045,46511511,46517362,46520212,46523084,46523804,46540176,46540807,46546255,46548312,46550415,46553400,46555152,46555285,46555531	46372866,46406749,46409133,46412870,46419964,46422584,46423141,46425682,46456906,46475365,46476218,46476959,46487140,46511608,46517433,46520283,46523155,46523884,46540247,46540881,46546373,46549843,46550519,46553449,46555206,46555424,46555643	Gene ID= ENSG00000260075.1 TPM= 9.73 Transcript Type= NA
chr17	46372813	46555643	46372813	46555643	+	transcript4720.chr17.nnic@AC217777.1	transcript4720.chr17.nnic	unprocessed_pseudogene	46372813,46406664,46409034,46412831,46419798,46422477,46423066,46425527,46456707,46475200,46476144,46476772,46487045,46517362,46520212,46523084,46523804,46540176,46540807,46546255,46548312,46550415,46553400,46555152,46555285,46555531	46372866,46406749,46409133,46412870,46419964,46422584,46423141,46425682,46456906,46475365,46476218,46476959,46487140,46517433,46520283,46523155,46523884,46540247,46540881,46546373,46549843,46550519,46553449,46555206,46555424,46555643	Gene ID= ENSG00000260075.1 TPM= 2.72 Transcript Type= NA
chr17	46372825	46555643	46372825	46555643	+	transcript4722.chr17.nnic@AC217777.1	transcript4722.chr17.nnic	unprocessed_pseudogene	46372825,46406664,46409034,46412831,46419798,46422477,46423066,46425527,46456707,46475200,46476144,46476772,46487045,46511511,46517362,46540176,46540807,46546255,46548312,46550415,46553400,46555152,46555285,46555531	46372866,46406749,46409133,46412870,46419964,46422584,46423141,46425682,46456906,46475365,46476218,46476959,46487140,46511608,46517433,46540247,46540881,46546373,46549843,46550519,46553449,46555206,46555424,46555643	Gene ID= ENSG00000260075.1 TPM= 2.72 Transcript Type= NA
chr17	46372855	46487141	46372855	46487141	+	ENST00000570034.1@AC217777.1	ENST00000570034.1	unprocessed_pseudogene	46372855,46406664,46409034,46412831,46419798,46422477,46423066,46425527,46456707,46475200,46476144,46476772,46487045	46372866,46406749,46409133,46412870,46419964,46422584,46423141,46425682,46456906,46475365,46476218,46476959,46487141	Gene ID= ENSG00000260075.1 TPM= 2.34 Transcript Type= unprocessed_pseudogene
chr17	46590669	46757464	46590669	46757464	+	ENST00000398238.8@NSF	ENST00000398238.8	protein_coding	46590669,46624244,46626613,46630411,46637376,46640054,46640643,46643104,46674414,46692903,46693847,46694475,46704759,46710963,46713853,46726549,46728855,46749773,46751503,46755314,46755802	46590787,46624329,46626712,46630450,46637542,46640161,46640718,46643259,46674613,46693068,46693921,46694662,46704854,46711119,46713986,46726615,46728934,46749907,46751616,46755369,46757464	Gene ID= ENSG00000073969.18 TPM= 117.93 Transcript Type= protein_coding
chr17	46762566	46771802	46762566	46771802	-	transcript4745.chr17.nic@WNT3	transcript4745.chr17.nic	protein_coding	46769783,46768312,46762566	46771802,46768799,46764621	Gene ID= ENSG00000108379.9 TPM= 3.5 Transcript Type= NA
chr17	46851586	46886730	46851586	46886730	+	ENST00000393461.2@WNT9B	ENST00000393461.2	protein_coding	46851586,46872517,46875101,46876245,46885034	46851715,46872773,46875366,46876548,46886730	Gene ID= ENSG00000158955.10 TPM= 1.17 Transcript Type= protein_coding
chr17	46923075	46942015	46923075	46942015	+	ENST00000640608.1@GOSR2	ENST00000640608.1	protein_coding	46923075,46929520,46931099,46932067,46938599	46923221,46929584,46931207,46932199,46942015	Gene ID= ENSG00000108433.16 TPM= 9.34 Transcript Type= protein_coding
chr17	46923164	46940779	46923164	46940779	+	ENST00000638374.1@GOSR2	ENST00000638374.1	protein_coding	46923164,46929524,46931099,46932067,46935029,46938599	46923221,46929584,46931207,46932199,46935169,46940779	Gene ID= ENSG00000108433.16 TPM= 3.5 Transcript Type= protein_coding
chr17	46923139	46941336	46923139	46941336	+	ENST00000638838.1@GOSR2	ENST00000638838.1	protein_coding	46923139,46929520,46931102,46932067,46935029,46938599	46923221,46929584,46931207,46932199,46935169,46941336	Gene ID= ENSG00000108433.16 TPM= 14.01 Transcript Type= protein_coding
chr17	46923153	46933267	46923153	46933267	+	ENST00000575949.6@GOSR2	ENST00000575949.6	protein_coding	46923153,46929520,46931099,46932067	46923221,46929584,46931207,46933267	Gene ID= ENSG00000108433.16 TPM= 1.17 Transcript Type= protein_coding
chr17	46923160	46936801	46923160	46936801	+	ENST00000640269.1@GOSR2	ENST00000640269.1	protein_coding	46923160,46929520,46931099,46932067,46935029	46923269,46929584,46931207,46932199,46936801	Gene ID= ENSG00000108433.16 TPM= 1.17 Transcript Type= protein_coding
chr17	46923128	46936801	46923128	46936801	+	ENST00000415811.7@GOSR2	ENST00000415811.7	protein_coding	46923128,46929520,46931102,46932067,46935029	46923221,46929584,46931207,46932199,46936801	Gene ID= ENSG00000108433.16 TPM= 1.17 Transcript Type= protein_coding
chr17	46933633	46937571	46933633	46937571	-	transcript4780.chr17.nnic@NA	transcript4780.chr17.nnic	NA	46933633	46937571	Gene ID= novel_gene_chr17_4781 TPM= 3.5 Transcript Type= NA
chr17	46978156	46979248	46978156	46979248	-	ENST00000322329.4@RPRML	ENST00000322329.4	protein_coding	46978156	46979248	Gene ID= ENSG00000179673.4 TPM= 1.17 Transcript Type= protein_coding
chr17	47047307	47051778	47047307	47051778	-	transcript4788.chr17.nnic@NA	transcript4788.chr17.nnic	NA	47047307	47051778	Gene ID= novel_gene_chr17_4789 TPM= 2.34 Transcript Type= NA
chr17	47177160	47180967	47177160	47180967	+	transcript4799.chr17.nnic@NA	transcript4799.chr17.nnic	NA	47177160	47180967	Gene ID= novel_gene_chr17_4800 TPM= 16.35 Transcript Type= NA
chr17	47397607	47398875	47397607	47398875	+	transcript4815.chr17.nnic@NA	transcript4815.chr17.nnic	NA	47397607	47398875	Gene ID= novel_gene_chr17_4816 TPM= 5.84 Transcript Type= NA
chr17	47531064	47623276	47531064	47623276	+	ENST00000322157.8@NPEPPS	ENST00000322157.8	protein_coding	47531064,47545909,47569417,47579390,47582742,47585500,47586148,47586365,47587230,47590717,47591956,47592485,47596353,47599676,47601608,47603915,47605333,47612460,47613669,47618350,47619009,47619737,47621768	47531555,47545993,47569494,47579511,47582849,47585700,47586244,47586398,47587344,47590881,47592060,47592545,47596462,47599739,47601747,47604049,47605552,47612602,47613725,47618457,47619164,47619784,47623276	Gene ID= ENSG00000141279.15 TPM= 161.13 Transcript Type= protein_coding
chr17	47621527	47649568	47621527	47649568	-	transcript4853.chr17.nnic@AC025682.1	transcript4853.chr17.nnic	antisense_RNA	47649396,47636512,47621527	47649568,47636601,47622087	Gene ID= ENSG00000263766.5 TPM= 2.34 Transcript Type= NA
chr17	47683306	47684658	47683306	47684658	+	transcript4854.chr17.nnic@NA	transcript4854.chr17.nnic	NA	47683306	47684658	Gene ID= novel_gene_chr17_4855 TPM= 4.67 Transcript Type= NA
chr17	47733244	47746119	47733244	47746119	+	ENST00000177694.1@TBX21	ENST00000177694.1	protein_coding	47733244,47742610,47743071,47744195,47744482,47744748	47733945,47742764,47743192,47744353,47744543,47746119	Gene ID= ENSG00000073861.2 TPM= 2.34 Transcript Type= protein_coding
chr17	47823272	47831517	47823272	47831517	-	ENST00000351111.6@MRPL10	ENST00000351111.6	protein_coding	47831460,47828501,47827040,47826637,47823272	47831517,47828670,47827204,47826781,47824458	Gene ID= ENSG00000159111.12 TPM= 1.17 Transcript Type= protein_coding
chr17	47823490	47831534	47823490	47831534	-	ENST00000414011.1@MRPL10	ENST00000414011.1	protein_coding	47831460,47829139,47828501,47827040,47826637,47823490	47831534,47829236,47828670,47827204,47826781,47824458	Gene ID= ENSG00000159111.12 TPM= 1.17 Transcript Type= protein_coding
chr17	47837700	47841333	47837700	47841333	-	ENST00000290216.13@SCRN2	ENST00000290216.13	protein_coding	47841208,47840670,47840191,47839444,47838791,47838531,47838270,47837700	47841333,47840843,47840372,47839643,47839006,47838696,47838450,47838002	Gene ID= ENSG00000141295.13 TPM= 19.56 Transcript Type= protein_coding
chr17	47837700	47841247	47837700	47841247	-	transcript4877.chr17.nic@SCRN2	transcript4877.chr17.nic	protein_coding	47841208,47840670,47839444,47838791,47838531,47838270,47837700	47841247,47840843,47840372,47839006,47838696,47838450,47838002	Gene ID= ENSG00000141295.13 TPM= 3.21 Transcript Type= NA
chr17	47837692	47841330	47837692	47841330	-	transcript4883.chr17.nic@SCRN2	transcript4883.chr17.nic	protein_coding	47841208,47840670,47839444,47838791,47838531,47837692	47841330,47840843,47840372,47839006,47838696,47838450	Gene ID= ENSG00000141295.13 TPM= 3.5 Transcript Type= NA
chr17	47837692	47841273	47837692	47841273	-	transcript4891.chr17.nic@SCRN2	transcript4891.chr17.nic	protein_coding	47841208,47840670,47839444,47838791,47837692	47841273,47840843,47840372,47839006,47838696	Gene ID= ENSG00000141295.13 TPM= 3.5 Transcript Type= NA
chr17	47837692	47841289	47837692	47841289	-	ENST00000407215.7@SCRN2	ENST00000407215.7	protein_coding	47841208,47840670,47840191,47839444,47838791,47838531,47837692	47841289,47840843,47840372,47839643,47839006,47838696,47838450	Gene ID= ENSG00000141295.13 TPM= 14.3 Transcript Type= protein_coding
chr17	47837707	47841173	47837707	47841173	-	ENST00000584123.5@SCRN2	ENST00000584123.5	protein_coding	47840670,47840191,47839444,47838791,47838531,47838270,47837707	47841173,47840372,47839643,47839006,47838696,47838450,47838002	Gene ID= ENSG00000141295.13 TPM= 3.79 Transcript Type= protein_coding
chr17	47844908	47855874	47844908	47855874	-	ENST00000342234.3@SP6	ENST00000342234.3	protein_coding	47855654,47844908	47855874,47848486	Gene ID= ENSG00000189120.4 TPM= 8.17 Transcript Type= protein_coding
chr17	47844914	47851193	47844914	47851193	-	ENST00000536300.1@SP6	ENST00000536300.1	protein_coding	47850919,47844914	47851193,47848486	Gene ID= ENSG00000189120.4 TPM= 9.34 Transcript Type= protein_coding
chr17	47891255	47895812	47891255	47895812	-	ENST00000582787.1@AC018521.5	ENST00000582787.1	processed_transcript	47895703,47893900,47891255	47895812,47893958,47891581	Gene ID= ENSG00000264920.1 TPM= 1.17 Transcript Type= lincRNA
chr17	47896150	47928957	47896150	47928957	+	ENST00000376741.4@SP2	ENST00000376741.4	protein_coding	47896150,47915312,47916156,47922962,47924919,47925348,47927724	47896293,47915388,47917130,47923274,47925093,47925541,47928957	Gene ID= ENSG00000167182.14 TPM= 20.43 Transcript Type= protein_coding
chr17	47896213	47928957	47896213	47928957	+	transcript4914.chr17.nnic@SP2	transcript4914.chr17.nnic	protein_coding	47896213,47915312,47922962,47924919,47925348,47927724	47896293,47915388,47923274,47925093,47925541,47928957	Gene ID= ENSG00000167182.14 TPM= 4.09 Transcript Type= NA
chr17	47941523	47949308	47941523	47949308	+	ENST00000642017.1@PNPO	ENST00000642017.1	protein_coding	47941523,47943306,47944616,47945559,47945861,47946323,47946614	47941813,47943430,47944715,47945612,47945989,47946393,47949308	Gene ID= ENSG00000108439.10 TPM= 56.04 Transcript Type= protein_coding
chr17	47951967	47957878	47951967	47957878	-	ENST00000300557.2@PRR15L	ENST00000300557.2	protein_coding	47957657,47951967	47957878,47953263	Gene ID= ENSG00000167183.2 TPM= 39.7 Transcript Type= protein_coding
chr17	47971013	47981768	47971013	47981768	+	transcript4923.chr17.nic@CDK5RAP3	transcript4923.chr17.nic	protein_coding	47971013,47971362,47973519,47973931,47974400,47975159,47975514,47975869,47976712,47977832,47978829,47980593,47981163,47981437,47981587	47971152,47971407,47973650,47974031,47974448,47975337,47975653,47976013,47976822,47977910,47978917,47980798,47981334,47981459,47981768	Gene ID= ENSG00000108465.14 TPM= 4.67 Transcript Type= NA
chr17	47971125	47981768	47971125	47981768	+	ENST00000585163.5@CDK5RAP3	ENST00000585163.5	protein_coding	47971125,47971362,47973519,47973931,47974400,47975514,47975869,47976712,47977832,47978829,47980593,47981163,47981437	47971152,47971407,47973650,47974031,47975337,47975653,47976013,47976822,47977910,47978917,47980798,47981334,47981768	Gene ID= ENSG00000108465.14 TPM= 7.47 Transcript Type= retained_intron
chr17	47971104	47981772	47971104	47981772	+	ENST00000584063.5@CDK5RAP3	ENST00000584063.5	protein_coding	47971104,47971362,47973519,47973931,47974400,47975514,47976712,47977832,47978829,47980593,47981163,47981437	47971152,47971407,47973650,47974031,47975337,47976013,47976822,47977910,47978917,47980798,47981334,47981772	Gene ID= ENSG00000108465.14 TPM= 28.23 Transcript Type= retained_intron
chr17	48026167	48037838	48026167	48037838	-	transcript4956.chr17.nic@COPZ2	transcript4956.chr17.nic	protein_coding	48037667,48036851,48033863,48033211,48032686,48032156,48029125,48028472,48027676,48026167	48037838,48036925,48033944,48033302,48032741,48032233,48029176,48028510,48027789,48026475	Gene ID= ENSG00000005243.9 TPM= 3.5 Transcript Type= NA
chr17	48030358	48037838	48030358	48037838	-	transcript4960.chr17.nnic@COPZ2	transcript4960.chr17.nnic	protein_coding	48037667,48036851,48033863,48033211,48032686,48032156,48030358	48037838,48036925,48033944,48033302,48032741,48032233,48031448	Gene ID= ENSG00000005243.9 TPM= 2.34 Transcript Type= NA
chr17	48031646	48037838	48031646	48037838	-	transcript4963.chr17.nic@COPZ2	transcript4963.chr17.nic	protein_coding	48037667,48036851,48033863,48033211,48032686,48031646	48037838,48036925,48033944,48033302,48032741,48032233	Gene ID= ENSG00000005243.9 TPM= 5.84 Transcript Type= NA
chr17	48026171	48037782	48026171	48037782	-	ENST00000621465.4@COPZ2	ENST00000621465.4	protein_coding	48037667,48036851,48033863,48033211,48032686,48032156,48029125,48028472,48026171	48037782,48036925,48033944,48033302,48032741,48032233,48029176,48028510,48026475	Gene ID= ENSG00000005243.9 TPM= 14.01 Transcript Type= protein_coding
chr17	48048751	48061487	48048751	48061487	+	transcript4974.chr17.nic@NFE2L1	transcript4974.chr17.nic	protein_coding	48048751,48050607,48056386,48057032,48057344,48058295	48048864,48051628,48056598,48057121,48057502,48061487	Gene ID= ENSG00000082641.15 TPM= 27.93 Transcript Type= NA
chr17	48048751	48061487	48048751	48061487	+	transcript4980.chr17.nic@NFE2L1	transcript4980.chr17.nic	protein_coding	48048751,48050607,48056386,48057344,48058295	48048864,48051628,48056598,48057502,48061487	Gene ID= ENSG00000082641.15 TPM= 33.77 Transcript Type= NA
chr17	48048359	48061480	48048359	48061480	+	ENST00000362042.7@NFE2L1	ENST00000362042.7	protein_coding	48048359,48050607,48056386,48057032,48057344,48058295	48048462,48051628,48056598,48057121,48057502,48061480	Gene ID= ENSG00000082641.15 TPM= 53.03 Transcript Type= protein_coding
chr17	48048370	48061479	48048370	48061479	+	ENST00000357480.9@NFE2L1	ENST00000357480.9	protein_coding	48048370,48050607,48056386,48057344,48058295	48048462,48051628,48056598,48057502,48061479	Gene ID= ENSG00000082641.15 TPM= 46.41 Transcript Type= protein_coding
chr17	48070052	48101521	48070052	48101521	-	ENST00000225603.8@CBX1	ENST00000225603.8	protein_coding	48101268,48076865,48076001,48075006,48070052	48101521,48077041,48076178,48075100,48071579	Gene ID= ENSG00000108468.14 TPM= 15.18 Transcript Type= protein_coding
chr17	48107513	48122743	48107513	48122743	+	transcript4990.chr17.nic@SNX11	transcript4990.chr17.nic	protein_coding	48107513,48112031,48112574,48113301,48118704,48118974,48121235	48107596,48112085,48112660,48113401,48118799,48119186,48122743	Gene ID= ENSG00000002919.14 TPM= 2.34 Transcript Type= NA
chr17	48107585	48122743	48107585	48122743	+	ENST00000359238.6@SNX11	ENST00000359238.6	protein_coding	48107585,48112031,48112574,48113301,48118704,48118974,48121235	48107838,48112085,48112660,48113401,48118799,48119186,48122743	Gene ID= ENSG00000002919.14 TPM= 29.19 Transcript Type= protein_coding
chr17	48133440	48430190	48133440	48430190	-	ENST00000336915.10@SKAP1	ENST00000336915.10	protein_coding	48430075,48396680,48363789,48345905,48189423,48187843,48184723,48182394,48180054,48170609,48162469,48137229,48133440	48430190,48396785,48363814,48346006,48189500,48187926,48184847,48182457,48180248,48170659,48162569,48137337,48133816	Gene ID= ENSG00000141293.15 TPM= 8.17 Transcript Type= protein_coding
chr17	48542655	48544989	48542655	48544989	-	ENST00000330070.5@HOXB2	ENST00000330070.5	protein_coding	48544521,48542655	48544989,48543747	Gene ID= ENSG00000173917.10 TPM= 5.84 Transcript Type= protein_coding
chr17	48575513	48580111	48575513	48580111	-	ENST00000332503.5@HOXB4	ENST00000332503.5	protein_coding	48577863,48575513	48580111,48577020	Gene ID= ENSG00000182742.5 TPM= 4.67 Transcript Type= protein_coding
chr17	48591260	48592698	48591260	48592698	-	transcript5014.chr17.nnic@HOXB3	transcript5014.chr17.nnic	protein_coding	48592568,48591260	48592698,48592456	Gene ID= ENSG00000120093.11 TPM= 4.09 Transcript Type= NA
chr17	48592292	48602337	48592292	48602337	+	ENST00000429755.8@HOXB-AS3	ENST00000429755.8	antisense_RNA	48592292,48600447,48602075	48592364,48600545,48602337	Gene ID= ENSG00000233101.10 TPM= 1.17 Transcript Type= antisense_RNA
chr17	48591257	48593961	48591257	48593961	-	ENST00000239151.5@HOXB5	ENST00000239151.5	protein_coding	48593121,48591257	48593961,48592456	Gene ID= ENSG00000120075.5 TPM= 5.25 Transcript Type= protein_coding
chr17	48595753	48598207	48595753	48598207	-	transcript5015.chr17.nic@HOXB6	transcript5015.chr17.nic	protein_coding	48597736,48595753	48598207,48596672	Gene ID= ENSG00000108511.9 TPM= 9.34 Transcript Type= NA
chr17	48607227	48611020	48607227	48611020	-	ENST00000239165.8@HOXB7	ENST00000239165.8	protein_coding	48610519,48607227	48611020,48608095	Gene ID= ENSG00000260027.4 TPM= 4.67 Transcript Type= protein_coding
chr17	48830988	48865245	48830988	48865245	+	ENST00000258947.7@CALCOCO2	ENST00000258947.7	protein_coding	48830988,48841698,48848064,48848322,48849252,48851089,48851559,48852506,48852926,48856092,48860314,48862276,48862838	48831078,48841887,48848166,48848455,48849377,48851177,48851628,48852628,48853012,48856187,48860449,48862304,48865245	Gene ID= ENSG00000136436.14 TPM= 17.51 Transcript Type= protein_coding
chr17	48839672	48842882	48839672	48842882	-	transcript5034.chr17.nnic@NA	transcript5034.chr17.nnic	NA	48839672	48842882	Gene ID= novel_gene_chr17_5035 TPM= 9.34 Transcript Type= NA
chr17	48842648	48844397	48842648	48844397	-	transcript5032.chr17.nnic@NA	transcript5032.chr17.nnic	NA	48842648	48844397	Gene ID= novel_gene_chr17_5033 TPM= 4.67 Transcript Type= NA
chr17	48892765	48895871	48892765	48895871	+	ENST00000355938.9@ATP5G1	ENST00000355938.9	protein_coding	48892765,48893409,48894372,48895156,48895655	48892840,48893456,48894449,48895334,48895871	Gene ID= ENSG00000159199.13 TPM= 29.77 Transcript Type= protein_coding
chr17	48892817	48895869	48892817	48895869	+	ENST00000393366.6@ATP5G1	ENST00000393366.6	protein_coding	48892817,48893409,48894372,48895156,48895655	48892910,48893456,48894449,48895334,48895869	Gene ID= ENSG00000159199.13 TPM= 6.42 Transcript Type= protein_coding
chr17	48892782	48895867	48892782	48895867	+	transcript5040.chr17.nic@ATP5G1	transcript5040.chr17.nic	protein_coding	48892782,48893409	48892840,48895867	Gene ID= ENSG00000159199.13 TPM= 8.17 Transcript Type= NA
chr17	48908417	48929054	48908417	48929054	+	transcript5044.chr17.nnic@UBE2Z	transcript5044.chr17.nnic	protein_coding	48908417,48908704,48910808,48912834,48916076,48921160,48922847,48926964	48908644,48908820,48910880,48913021,48916187,48921272,48922937,48929054	Gene ID= ENSG00000159202.17 TPM= 12.84 Transcript Type= NA
chr17	48908369	48929056	48908369	48929056	+	ENST00000360943.9@UBE2Z	ENST00000360943.9	protein_coding	48908369,48910808,48912834,48916076,48921160,48922847,48926964	48908820,48910880,48913021,48916187,48921272,48922937,48929056	Gene ID= ENSG00000159202.17 TPM= 74.73 Transcript Type= protein_coding
chr17	48929316	48945117	48929316	48945117	-	ENST00000502492.5@SNF8	ENST00000502492.5	protein_coding	48944681,48943925,48940924,48937020,48936170,48933205,48931643,48929316	48945117,48943975,48941062,48937124,48936242,48933346,48931717,48930612	Gene ID= ENSG00000159210.9 TPM= 91.07 Transcript Type= protein_coding
chr17	48930374	48944810	48930374	48944810	-	ENST00000290330.7@SNF8	ENST00000290330.7	protein_coding	48944681,48943925,48940924,48937020,48936170,48933205,48931643,48930374	48944810,48943975,48941062,48937124,48936242,48933346,48931714,48930612	Gene ID= ENSG00000159210.9 TPM= 94.58 Transcript Type= protein_coding
chr17	49132769	49176840	49132769	49176840	+	ENST00000393354.6@B4GALNT2	ENST00000393354.6	protein_coding	49132769,49141247,49142035,49152800,49156566,49159037,49160555,49164088,49166114,49168681,49169523	49132806,49141447,49142172,49152906,49156603,49159217,49160641,49164275,49166254,49168900,49176840	Gene ID= ENSG00000167080.8 TPM= 1.17 Transcript Type= protein_coding
chr17	49203096	49210271	49203096	49210271	-	transcript5056.chr17.nnic@GNGT2	transcript5056.chr17.nnic	protein_coding	49209880,49208845,49207339,49203096	49210271,49208954,49207444,49206882	Gene ID= ENSG00000167083.6 TPM= 2.34 Transcript Type= NA
chr17	49210227	49223225	49210227	49223225	+	ENST00000225941.5@ABI3	ENST00000225941.5	protein_coding	49210227,49216531,49217739,49219540,49219858,49220169,49222091,49222552	49210841,49216698,49217915,49219625,49219953,49220326,49222225,49223225	Gene ID= ENSG00000108798.8 TPM= 37.36 Transcript Type= protein_coding
chr17	49210411	49223036	49210411	49223036	+	ENST00000419580.6@ABI3	ENST00000419580.6	protein_coding	49210411,49216531,49217739,49219540,49219858,49220169,49222091,49222552	49210841,49216680,49217915,49219625,49219953,49220326,49222225,49223036	Gene ID= ENSG00000108798.8 TPM= 21.02 Transcript Type= protein_coding
chr17	49315499	49362108	49315499	49362108	-	transcript5069.chr17.nic@ZNF652	transcript5069.chr17.nic	protein_coding	49361909,49315499	49362108,49317983	Gene ID= ENSG00000198740.8 TPM= 3.5 Transcript Type= NA
chr17	49290021	49293683	49290021	49293683	+	transcript5070.chr17.nnic@NA	transcript5070.chr17.nnic	NA	49290021	49293683	Gene ID= novel_gene_chr17_5071 TPM= 81.73 Transcript Type= NA
chr17	49404049	49414905	49404049	49414905	-	ENST00000614445.4@PHB	ENST00000614445.4	protein_coding	49414835,49414242,49413177,49411678,49409331,49409042,49406759,49404049	49414905,49414333,49413291,49411839,49409473,49409158,49406854,49405204	Gene ID= ENSG00000167085.11 TPM= 14.01 Transcript Type= protein_coding
chr17	49404052	49414880	49404052	49414880	-	ENST00000300408.7@PHB	ENST00000300408.7	protein_coding	49414835,49413177,49411678,49409331,49409042,49406759,49404052	49414880,49413291,49411839,49409473,49409158,49406854,49405204	Gene ID= ENSG00000167085.11 TPM= 77.06 Transcript Type= protein_coding
chr17	49495293	49515017	49495293	49515017	+	ENST00000172229.7@NGFR	ENST00000172229.7	protein_coding	49495293,49502063,49506299,49510412,49511892,49512708	49495483,49502204,49506658,49510664,49512052,49515017	Gene ID= ENSG00000064300.8 TPM= 2.34 Transcript Type= protein_coding
chr17	49575858	49580358	49575858	49580358	+	ENST00000328741.5@NXPH3	ENST00000328741.5	protein_coding	49575858,49578596	49576273,49580358	Gene ID= ENSG00000182575.7 TPM= 3.5 Transcript Type= protein_coding
chr17	49599284	49678105	49599284	49678105	-	transcript5086.chr17.nic@SPOP	transcript5086.chr17.nic	protein_coding	49677933,49675895,49668027,49622733,49621946,49619234,49618981,49611280,49607874,49607250,49601865,49599284	49678105,49676016,49668078,49622876,49622067,49619385,49619108,49611457,49607929,49607372,49602007,49600522	Gene ID= ENSG00000121067.17 TPM= 4.9 Transcript Type= NA
chr17	49600006	49678039	49600006	49678039	-	transcript5088.chr17.nic@SPOP	transcript5088.chr17.nic	protein_coding	49677933,49668027,49636759,49622733,49621946,49619234,49618981,49611280,49607874,49607250,49601865,49600006	49678039,49668078,49636809,49622876,49622067,49619385,49619108,49611457,49607929,49607372,49602007,49600522	Gene ID= ENSG00000121067.17 TPM= 3.5 Transcript Type= NA
chr17	49600006	49678105	49600006	49678105	-	transcript5089.chr17.nic@SPOP	transcript5089.chr17.nic	protein_coding	49677933,49675895,49636759,49622733,49621946,49619234,49618981,49611280,49607874,49607250,49601865,49600006	49678105,49676016,49636809,49622876,49622067,49619385,49619108,49611457,49607929,49607372,49602007,49600522	Gene ID= ENSG00000121067.17 TPM= 4.67 Transcript Type= NA
chr17	49598886	49678163	49598886	49678163	-	ENST00000347630.6@SPOP	ENST00000347630.6	protein_coding	49677933,49636759,49622733,49621946,49619234,49618981,49611280,49607874,49607250,49601865,49598886	49678163,49636809,49622876,49622067,49619385,49619108,49611457,49607929,49607372,49602007,49600522	Gene ID= ENSG00000121067.17 TPM= 4.9 Transcript Type= protein_coding
chr17	49599284	49678132	49599284	49678132	-	transcript5093.chr17.nic@SPOP	transcript5093.chr17.nic	protein_coding	49677933,49668027,49622733,49621946,49619234,49618981,49611280,49607874,49607250,49601865,49599284	49678132,49668078,49622876,49622067,49619385,49619108,49611457,49607929,49607372,49602007,49600522	Gene ID= ENSG00000121067.17 TPM= 4.9 Transcript Type= NA
chr17	49598884	49678110	49598884	49678110	-	ENST00000393328.6@SPOP	ENST00000393328.6	protein_coding	49677933,49675895,49622733,49621946,49619234,49618981,49611280,49607874,49607250,49601865,49598884	49678110,49676016,49622876,49622067,49619385,49619108,49611457,49607929,49607372,49602007,49600522	Gene ID= ENSG00000121067.17 TPM= 6.07 Transcript Type= protein_coding
chr17	49600006	49678234	49600006	49678234	-	ENST00000504102.5@SPOP	ENST00000504102.5	protein_coding	49677933,49622733,49621946,49619234,49618981,49611280,49607874,49607250,49601865,49600006	49678234,49622876,49622067,49619385,49619108,49611457,49607929,49607372,49602007,49600522	Gene ID= ENSG00000121067.17 TPM= 56.04 Transcript Type= protein_coding
chr17	49700943	49708199	49700943	49708199	-	ENST00000240333.10@SLC35B1	ENST00000240333.10	protein_coding	49707730,49706965,49706204,49705866,49705124,49704100,49703188,49702858,49700943	49708199,49707068,49706334,49705896,49705281,49704226,49703294,49703011,49701510	Gene ID= ENSG00000121073.13 TPM= 2.34 Transcript Type= protein_coding
chr17	49701321	49708170	49701321	49708170	-	transcript5114.chr17.nic@SLC35B1	transcript5114.chr17.nic	protein_coding	49708076,49706965,49706204,49705866,49705124,49704100,49703188,49702858,49701321	49708170,49707068,49706334,49705896,49705281,49704226,49703294,49703011,49701510	Gene ID= ENSG00000121073.13 TPM= 2.34 Transcript Type= NA
chr17	49706103	49707967	49706103	49707967	-	transcript5119.chr17.nic@SLC35B1	transcript5119.chr17.nic	protein_coding	49707730,49706103	49707967,49707068	Gene ID= ENSG00000121073.13 TPM= 2.34 Transcript Type= NA
chr17	49710332	49764167	49710332	49764167	-	ENST00000240364.6@FAM117A	ENST00000240364.6	protein_coding	49763892,49732551,49722499,49720326,49719760,49717513,49716165,49710332	49764167,49732720,49722594,49720436,49719894,49717714,49716315,49711555	Gene ID= ENSG00000121104.7 TPM= 28.02 Transcript Type= protein_coding
chr17	49788555	49835030	49788555	49835030	+	ENST00000259021.8@KAT7	ENST00000259021.8	protein_coding	49788555,49791886,49796750,49798319,49805363,49809119,49811476,49815803,49817820,49821337,49821650,49823202,49826000,49826693,49827401	49788849,49792033,49796926,49798558,49805445,49809208,49811574,49815913,49818011,49821426,49821790,49823295,49826146,49826799,49835030	Gene ID= ENSG00000136504.11 TPM= 39.7 Transcript Type= protein_coding
chr17	49788706	49829096	49788706	49829096	+	ENST00000424009.6@KAT7	ENST00000424009.6	protein_coding	49788706,49791886,49796750,49798319,49805363,49811476,49815803,49817820,49821337,49821650,49823202,49826000,49826693,49827401	49788849,49792033,49796926,49798558,49805445,49811574,49815913,49818011,49821426,49821790,49823295,49826146,49826799,49829096	Gene ID= ENSG00000136504.11 TPM= 8.17 Transcript Type= protein_coding
chr17	50050350	50055708	50050350	50055708	-	transcript5138.chr17.nnic@PICART1	transcript5138.chr17.nnic	lincRNA	50055629,50053493,50050350	50055708,50053627,50052589	Gene ID= ENSG00000246640.1 TPM= 3.5 Transcript Type= NA
chr17	50055276	50090481	50055276	50090481	+	transcript5132.chr17.nic@ITGA3	transcript5132.chr17.nic	protein_coding	50055276,50064077,50064528,50068056,50070844,50071311,50071986,50073916,50074144,50074448,50075459,50076326,50076584,50076974,50077379,50078046,50078207,50078824,50079076,50079435,50080262,50081310,50087744,50088225,50089110	50056645,50064204,50064607,50068305,50070930,50071518,50072182,50074004,50074280,50074534,50075735,50076475,50076681,50077121,50077447,50078125,50078284,50078926,50079258,50079557,50080375,50081408,50087869,50088366,50090481	Gene ID= ENSG00000005884.17 TPM= 65 Transcript Type= NA
chr17	50056110	50090480	50056110	50090480	+	ENST00000320031.12@ITGA3	ENST00000320031.12	protein_coding	50056110,50064077,50064528,50068056,50070844,50071311,50071986,50073916,50074144,50074448,50075459,50075599,50076326,50076584,50076974,50077379,50078046,50078207,50078824,50079076,50079435,50080262,50081310,50087744,50088225,50089110	50056645,50064204,50064607,50068305,50070930,50071518,50072182,50074004,50074280,50074534,50075526,50075735,50076475,50076681,50077121,50077447,50078125,50078284,50078926,50079258,50079557,50080375,50081408,50087869,50088366,50090480	Gene ID= ENSG00000005884.17 TPM= 160.74 Transcript Type= protein_coding
chr17	50056068	50090480	50056068	50090480	+	ENST00000505306.5@ITGA3	ENST00000505306.5	protein_coding	50056068,50064077,50064528,50068056,50070844,50071311,50071986,50073916,50074144,50074448,50075459,50075599,50076326,50076584,50078046,50078207,50078824,50079076,50079435,50080262,50081310,50087744,50088225,50089110	50056645,50064204,50064607,50068305,50070930,50071518,50072182,50074004,50074280,50074534,50075526,50075735,50076475,50077447,50078125,50078284,50078926,50079258,50079557,50080375,50081408,50087869,50088366,50090480	Gene ID= ENSG00000005884.17 TPM= 33.47 Transcript Type= retained_intron
chr17	50095355	50111054	50095355	50111054	+	transcript5153.chr17.nic@PDK2	transcript5153.chr17.nic	protein_coding	50095355,50097423,50105371,50105885,50106794,50107076,50108156,50108319,50108612,50109287	50095553,50097564,50105442,50106069,50106883,50107153,50108232,50108417,50108719,50111054	Gene ID= ENSG00000005882.11 TPM= 4.09 Transcript Type= NA
chr17	50095359	50111058	50095359	50111058	+	transcript5154.chr17.nic@PDK2	transcript5154.chr17.nic	protein_coding	50095359,50097423,50105371,50105885,50106794,50107076,50108156,50108612,50109287,50109957	50095553,50097564,50105442,50106069,50106883,50107153,50108417,50108719,50109400,50111058	Gene ID= ENSG00000005882.11 TPM= 4.09 Transcript Type= NA
chr17	50095387	50106368	50095387	50106368	+	ENST00000505897.5@PDK2	ENST00000505897.5	protein_coding	50095387,50097423,50105371,50105885	50095553,50097564,50105442,50106368	Gene ID= ENSG00000005882.11 TPM= 1.17 Transcript Type= retained_intron
chr17	50111309	50129893	50111309	50129893	-	transcript5148.chr17.nic@SAMD14	transcript5148.chr17.nic	protein_coding	50129517,50125091,50124917,50118161,50117407,50116003,50115830,50115564,50114187,50113924,50111309	50129893,50125325,50124971,50118327,50117695,50116090,50115904,50115723,50114306,50114079,50113048	Gene ID= ENSG00000167100.14 TPM= 24.52 Transcript Type= NA
chr17	50135227	50150703	50135227	50150703	-	transcript5176.chr17.nnic@PPP1R9B	transcript5176.chr17.nnic	protein_coding	50149143,50145113,50143598,50140093,50139429,50139263,50135968,50135553,50135227	50150703,50145245,50143720,50141373,50139583,50139318,50136197,50135649,50135384	Gene ID= ENSG00000108819.10 TPM= 30.36 Transcript Type= NA
chr17	50133735	50150630	50133735	50150630	-	ENST00000612501.1@PPP1R9B	ENST00000612501.1	protein_coding	50149143,50145113,50143598,50141269,50140093,50139429,50139263,50135968,50135553,50133735	50150630,50145245,50143718,50141373,50140228,50139581,50139316,50136197,50135649,50135384	Gene ID= ENSG00000108819.10 TPM= 54.88 Transcript Type= protein_coding
chr17	50165989	50175900	50165989	50175900	+	transcript5179.chr17.nic@SGCA	transcript5179.chr17.nic	protein_coding	50165989,50167368,50167582,50167947,50168374,50169092,50170143,50170640,50175257,50175712	50166077,50167487,50167736,50168019,50168572,50169104,50170351,50170666,50175449,50175900	Gene ID= ENSG00000108823.15 TPM= 2.72 Transcript Type= NA
chr17	50165989	50175928	50165989	50175928	+	transcript5180.chr17.nic@SGCA	transcript5180.chr17.nic	protein_coding	50165989,50167368,50167582,50167947,50168374,50169092,50170143,50170640,50175257,50175712	50166077,50167487,50167736,50168019,50168572,50169254,50170351,50170666,50175375,50175928	Gene ID= ENSG00000108823.15 TPM= 2.72 Transcript Type= NA
chr17	50165989	50175900	50165989	50175900	+	transcript5183.chr17.nic@SGCA	transcript5183.chr17.nic	protein_coding	50165989,50167368,50167582,50167947,50168374,50169092,50170640,50175257,50175712	50166077,50167487,50167736,50168019,50168572,50170351,50170666,50175449,50175900	Gene ID= ENSG00000108823.15 TPM= 2.72 Transcript Type= NA
chr17	50166005	50175931	50166005	50175931	+	ENST00000262018.7@SGCA	ENST00000262018.7	protein_coding	50166005,50167368,50167582,50167947,50168374,50169092,50170143,50170640,50175257,50175712	50166077,50167487,50167736,50168019,50168572,50169254,50170351,50170666,50175449,50175931	Gene ID= ENSG00000108823.15 TPM= 26.07 Transcript Type= protein_coding
chr17	50166005	50175928	50166005	50175928	+	ENST00000344627.10@SGCA	ENST00000344627.10	protein_coding	50166005,50167368,50167582,50167947,50168374,50170640,50175257,50175712	50166077,50167487,50167736,50168019,50168572,50170666,50175449,50175928	Gene ID= ENSG00000108823.15 TPM= 3.12 Transcript Type= protein_coding
chr17	50185258	50201632	50185258	50201632	-	transcript5185.chr17.nnic@COL1A1	transcript5185.chr17.nnic	protein_coding	50201612,50201411,50199753,50199556,50199418,50199226,50198433,50198161,50197949,50197732,50197180,50197010,50196617,50196484,50196314,50196155,50195923,50195567,50195434,50195232,50195047,50194721,50194573,50194349,50194130,50193943,50192994,50192797,50192640,50192475,50191980,50191788,50191383,50190817,50190543,50190327,50190001,50189859,50189679,50189377,50189168,50188903,50188742,50188530,50188096,50187876,50187484,50187015,50186640,50186317,50185778,50185258	50201632,50201477,50199947,50199590,50199453,50199327,50198504,50198205,50198002,50197785,50197233,50197063,50196670,50196528,50196367,50196199,50195976,50195665,50195478,50195330,50195100,50194828,50194626,50194447,50194183,50194041,50193047,50192850,50192693,50192528,50192024,50191886,50191490,50190924,50190596,50190380,50190108,50189912,50189732,50189538,50189275,50189010,50188795,50188637,50188149,50187983,50187537,50187122,50186922,50186507,50186020,50185648	Gene ID= ENSG00000108821.13 TPM= 48.84 Transcript Type= NA
chr17	50184096	50185165	50184096	50185165	-	transcript5194.chr17.nnic@NA	transcript5194.chr17.nnic	NA	50184096	50185165	Gene ID= novel_gene_chr17_5195 TPM= 9.34 Transcript Type= NA
chr17	50346092	50361151	50346092	50361151	+	ENST00000017003.6@XYLT2	ENST00000017003.6	protein_coding	50346092,50353630,50354408,50354854,50355501,50355781,50356085,50356511,50357057,50358207,50359969	50346275,50354122,50354583,50355056,50355581,50355997,50356261,50356773,50357252,50358540,50361151	Gene ID= ENSG00000015532.9 TPM= 18.68 Transcript Type= protein_coding
chr17	50367867	50373214	50367867	50373214	-	ENST00000225969.8@MRPL27	ENST00000225969.8	protein_coding	50373131,50370455,50370032,50367867	50373214,50370586,50370099,50368298	Gene ID= ENSG00000108826.15 TPM= 39.7 Transcript Type= protein_coding
chr17	50367868	50373207	50367868	50373207	-	ENST00000442592.3@MRPL27	ENST00000442592.3	protein_coding	50373131,50370455,50367868	50373207,50370586,50370099	Gene ID= ENSG00000108826.15 TPM= 4.67 Transcript Type= protein_coding
chr17	50381238	50397553	50381238	50397553	-	ENST00000225972.7@LRRC59	ENST00000225972.7	protein_coding	50397213,50394929,50392739,50392398,50388060,50385118,50381238	50397553,50394988,50392897,50392502,50388132,50385291,50383235	Gene ID= ENSG00000108829.9 TPM= 151.79 Transcript Type= protein_coding
chr17	50426158	50474835	50426158	50474835	+	ENST00000300441.8@ACSF2	ENST00000300441.8	protein_coding	50426158,50460677,50461242,50461633,50462184,50462420,50463156,50463395,50463818,50464218,50471028,50472428,50473665,50473894,50474199,50474502	50426389,50460872,50461370,50461686,50462302,50462585,50463251,50463552,50463909,50464294,50471135,50472579,50473806,50474004,50474267,50474835	Gene ID= ENSG00000167107.12 TPM= 33.86 Transcript Type= protein_coding
chr17	50469533	50474837	50469533	50474837	+	transcript5219.chr17.nic@ACSF2	transcript5219.chr17.nic	protein_coding	50469533,50473665,50474502	50472579,50474267,50474837	Gene ID= ENSG00000167107.12 TPM= 2.34 Transcript Type= NA
chr17	50430568	50432801	50430568	50432801	-	transcript5220.chr17.nnic@NA	transcript5220.chr17.nnic	NA	50430568	50432801	Gene ID= novel_gene_chr17_5221 TPM= 2.34 Transcript Type= NA
chr17	50478800	50485975	50478800	50485975	+	ENST00000258955.6@RSAD1	ENST00000258955.6	protein_coding	50478800,50479629,50479880,50482091,50482643,50483340,50483706,50484442,50484744	50479019,50479762,50480084,50482456,50482706,50483487,50483760,50484545,50485975	Gene ID= ENSG00000136444.9 TPM= 57.21 Transcript Type= protein_coding
chr17	50532543	50543750	50532543	50543750	+	ENST00000268933.7@EPN3	ENST00000268933.7	protein_coding	50532543,50536421,50538079,50538884,50539187,50540247,50540793,50541229,50541464,50541844	50532985,50537118,50538197,50538964,50539315,50540334,50541062,50541333,50541694,50543750	Gene ID= ENSG00000049283.17 TPM= 1.17 Transcript Type= protein_coding
chr17	50547127	50555850	50547127	50555850	+	ENST00000503127.5@SPATA20	ENST00000503127.5	protein_coding	50547127,50547665,50548283,50548554,50548810,50549043,50549286,50549985,50550208,50550536,50550708,50550998,50551511,50551969,50554251,50555232,50555492	50547285,50547767,50548453,50548618,50548964,50549186,50549487,50550115,50550312,50550610,50550917,50551190,50551679,50552180,50554450,50555312,50555850	Gene ID= ENSG00000006282.20 TPM= 42.06 Transcript Type= nonsense_mediated_decay
chr17	50547089	50555852	50547089	50555852	+	ENST00000006658.10@SPATA20	ENST00000006658.10	protein_coding	50547089,50547720,50548283,50548554,50548810,50549043,50549286,50549985,50550208,50550536,50550708,50550998,50551511,50551969,50554251,50555232,50555492	50547285,50547767,50548453,50548618,50548964,50549186,50549487,50550115,50550312,50550610,50550917,50551190,50551679,50552180,50554450,50555312,50555852	Gene ID= ENSG00000006282.20 TPM= 23.96 Transcript Type= protein_coding
chr17	50547129	50555852	50547129	50555852	+	transcript5236.chr17.nic@SPATA20	transcript5236.chr17.nic	protein_coding	50547129,50547665,50548283,50548554,50548810,50549043,50549286,50549985,50550208,50550536,50550708,50550998,50551511,50554251,50555232,50555492	50547285,50547767,50548453,50548618,50548964,50549186,50549487,50550115,50550312,50550610,50550917,50551190,50552180,50554450,50555312,50555852	Gene ID= ENSG00000006282.20 TPM= 4.5 Transcript Type= NA
chr17	50543058	50555850	50543058	50555850	+	ENST00000504334.5@SPATA20	ENST00000504334.5	protein_coding	50543058,50546306,50547068,50547665,50548283,50548554,50548810,50549043,50549286,50549985,50550536,50550708,50550998,50551511,50551969,50554251,50555232,50555492	50543535,50546481,50547285,50547767,50548453,50548618,50548964,50549186,50549487,50550312,50550610,50550917,50551190,50551679,50552180,50554450,50555312,50555850	Gene ID= ENSG00000006282.20 TPM= 5.08 Transcript Type= nonsense_mediated_decay
chr17	50547126	50555852	50547126	50555852	+	ENST00000356488.8@SPATA20	ENST00000356488.8	protein_coding	50547126,50548283,50548554,50548810,50549043,50549286,50549985,50550208,50550536,50550708,50550998,50551511,50551969,50554251,50555232,50555492	50547285,50548453,50548618,50548964,50549186,50549487,50550115,50550312,50550610,50550917,50551190,50551679,50552180,50554450,50555312,50555852	Gene ID= ENSG00000006282.20 TPM= 8.78 Transcript Type= protein_coding
chr17	50547163	50555852	50547163	50555852	+	transcript5248.chr17.nic@SPATA20	transcript5248.chr17.nic	protein_coding	50547163,50547720,50548283,50548554,50548810,50549043,50549286,50549985,50550536,50550708,50550998,50554251,50555232,50555492	50547285,50547767,50548453,50548618,50548964,50549186,50549487,50550312,50550610,50550917,50552180,50554450,50555312,50555852	Gene ID= ENSG00000006282.20 TPM= 4.2 Transcript Type= NA
chr17	50634825	50661350	50634825	50661350	+	transcript5285.chr17.nic@ABCC3	transcript5285.chr17.nic	protein_coding	50634825,50655832,50656702,50657046,50658082,50658435,50659237,50660923	50634981,50656008,50656827,50657183,50658207,50658496,50659368,50661350	Gene ID= ENSG00000108846.15 TPM= 3.5 Transcript Type= NA
chr17	50634857	50667923	50634857	50667923	+	ENST00000427699.5@ABCC3	ENST00000427699.5	protein_coding	50634857,50655832,50656702,50657046,50658082,50658435,50659237,50660923,50663681,50663950,50665153,50667554	50634981,50656008,50656827,50657183,50658207,50658496,50659368,50661114,50663858,50664111,50665245,50667923	Gene ID= ENSG00000108846.15 TPM= 7.01 Transcript Type= protein_coding
chr17	50634901	50691702	50634901	50691702	+	ENST00000505699.5@ABCC3	ENST00000505699.5	protein_coding	50634901,50655832,50656702,50657046,50658082,50658435,50659237,50660923,50663681,50663950,50665153,50667554,50667863,50668430,50668853,50669140,50669352,50672971,50673469,50675362,50675631,50675883,50676278,50677744,50679798,50683610,50683949,50684709,50687536,50691092	50634981,50656008,50656827,50657183,50658207,50658496,50659368,50661114,50663858,50664111,50665245,50667757,50668009,50668517,50668919,50669266,50669528,50673138,50673658,50675476,50675775,50676090,50676588,50678219,50679899,50683756,50684107,50684875,50687730,50691702	Gene ID= ENSG00000108846.15 TPM= 10.51 Transcript Type= nonsense_mediated_decay
chr17	50693190	50707924	50693190	50707924	-	ENST00000285243.6@ANKRD40	ENST00000285243.6	protein_coding	50707521,50700568,50699399,50696940,50693190	50707924,50700716,50699893,50697121,50696143	Gene ID= ENSG00000154945.6 TPM= 44.37 Transcript Type= protein_coding
chr17	50719559	50752640	50719559	50752640	+	transcript5295.chr17.nic@LUC7L3	transcript5295.chr17.nic	protein_coding	50719559,50736960,50737287,50738137,50740306,50741102,50741657,50743706,50744652,50745720,50746542,50750501	50719831,50737026,50737479,50738199,50740345,50741246,50741731,50743810,50744813,50746003,50746702,50752640	Gene ID= ENSG00000108848.15 TPM= 6.42 Transcript Type= NA
chr17	50719544	50756213	50719544	50756213	+	ENST00000505658.5@LUC7L3	ENST00000505658.5	protein_coding	50719544,50736960,50740306,50741102,50741657,50743706,50744652,50745720,50746542,50750501	50719831,50737026,50740345,50741246,50741731,50743810,50744813,50746003,50746702,50756213	Gene ID= ENSG00000108848.15 TPM= 5.25 Transcript Type= protein_coding
chr17	50719603	50752709	50719603	50752709	+	ENST00000240304.5@LUC7L3	ENST00000240304.5	protein_coding	50719603,50736960,50740306,50741102,50741657,50743706,50744652,50745720,50746542,50750501,50752200	50719831,50737026,50740345,50741246,50741731,50743810,50744813,50746003,50746702,50750694,50752709	Gene ID= ENSG00000108848.15 TPM= 7.01 Transcript Type= protein_coding
chr17	50817104	50821043	50817104	50821043	+	transcript5325.chr17.nnic@NA	transcript5325.chr17.nnic	NA	50817104	50821043	Gene ID= novel_gene_chr17_5326 TPM= 2.34 Transcript Type= NA
chr17	50835410	50842348	50835410	50842348	+	ENST00000311378.4@WFIKKN2	ENST00000311378.4	protein_coding	50835410,50839499	50836147,50842348	Gene ID= ENSG00000173714.7 TPM= 2.34 Transcript Type= protein_coding
chr17	50862223	50866345	50862223	50866345	-	ENST00000499247.2@TOB1	ENST00000499247.2	protein_coding	50866058,50862223	50866345,50864163	Gene ID= ENSG00000141232.4 TPM= 141.28 Transcript Type= protein_coding
chr17	50866679	50868307	50866679	50868307	+	ENST00000416263.3@TOB1-AS1	ENST00000416263.3	processed_transcript	50866679,50867496	50867217,50868307	Gene ID= ENSG00000229980.4 TPM= 2.34 Transcript Type= antisense_RNA
chr17	50934989	50944713	50934989	50944713	-	ENST00000501718.2@AC005920.1	ENST00000501718.2	lincRNA	50943397,50934989	50944713,50935725	Gene ID= ENSG00000247011.2 TPM= 1.17 Transcript Type= lincRNA
chr17	50965644	51120891	50965644	51120891	-	transcript5341.chr17.nic@SPAG9	transcript5341.chr17.nic	protein_coding	51120354,51079584,51056412,51047375,51041501,51031681,51021158,51020159,51014232,51007269,51006085,51005212,51001715,50999661,50998444,50996565,50995444,50995057,50993764,50990450,50989677,50987112,50985698,50984923,50982524,50979746,50977108,50975863,50974771,50970707,50965644	51120891,51079704,51056482,51047469,51041651,51031722,51021365,51020258,51014353,51007326,51006237,51005263,51001845,50999717,50998617,50996694,50995533,50995224,50993935,50990668,50989872,50987237,50985778,50984990,50982672,50979917,50977221,50975901,50974947,50970856,50966387	Gene ID= ENSG00000008294.20 TPM= 14.4 Transcript Type= NA
chr17	50965075	51120891	50965075	51120891	-	transcript5344.chr17.nic@SPAG9	transcript5344.chr17.nic	protein_coding	51120354,51079584,51056412,51047375,51041501,51021158,51020159,51014232,51007269,51006085,51005212,51001715,50999661,50998444,50996565,50995444,50995057,50993764,50990450,50989677,50987112,50985698,50984923,50982524,50979746,50977108,50975863,50974771,50970707,50965075	51120891,51079704,51056482,51047469,51041651,51021365,51020258,51014353,51007326,51006237,51005263,51001845,50999717,50998617,50996694,50995533,50995224,50993935,50990668,50989872,50987237,50985778,50984990,50982672,50979917,50977221,50975901,50974947,50970856,50966387	Gene ID= ENSG00000008294.20 TPM= 5.76 Transcript Type= NA
chr17	50965644	51120891	50965644	51120891	-	transcript5345.chr17.nic@SPAG9	transcript5345.chr17.nic	protein_coding	51120354,51079584,51056412,51047375,51041501,51021158,51020159,51014232,51007269,51006085,51005212,51001715,50999661,50998444,50996565,50995444,50995057,50993764,50990450,50989677,50987112,50985698,50984923,50982524,50979746,50977108,50975863,50974771,50970707,50965644	51120891,51079704,51056482,51047469,51041651,51021365,51020258,51014353,51007326,51006237,51005263,51001845,50999717,50998617,50996694,50995533,50995224,50993935,50990668,50989827,50987237,50985778,50984990,50982672,50979917,50977221,50975901,50974947,50970856,50966387	Gene ID= ENSG00000008294.20 TPM= 3.22 Transcript Type= NA
chr17	50965644	51120891	50965644	51120891	-	transcript5350.chr17.nic@SPAG9	transcript5350.chr17.nic	protein_coding	51120354,51079584,51056412,51047375,51041501,51021158,51020159,51014232,51007269,51006085,51005212,51001715,50999661,50998444,50996565,50995444,50995057,50993764,50990450,50989677,50987112,50985698,50984923,50982524,50979746,50975863,50974771,50970707,50965644	51120891,51079704,51056482,51047469,51041651,51021365,51020258,51014353,51007326,51006237,51005263,51001845,50999717,50998617,50996694,50995533,50995224,50993935,50990668,50989872,50987237,50985778,50984990,50982672,50979917,50977221,50974947,50970856,50966387	Gene ID= ENSG00000008294.20 TPM= 2.84 Transcript Type= NA
chr17	50965644	51120891	50965644	51120891	-	transcript5351.chr17.nic@SPAG9	transcript5351.chr17.nic	protein_coding	51120354,51079584,51056412,51047375,51041501,51021158,51020159,51014232,51007269,51006085,51005212,51001715,50999661,50998444,50996565,50995444,50995057,50993764,50990450,50989677,50987112,50985698,50984923,50982524,50979746,50977108,50974771,50970707,50965644	51120891,51079704,51056482,51047469,51041651,51021365,51020258,51014353,51007326,51006237,51005263,51001845,50999717,50998617,50996694,50995533,50995224,50993935,50990668,50989827,50987237,50985778,50984990,50982672,50979917,50977221,50974947,50970856,50966387	Gene ID= ENSG00000008294.20 TPM= 5.17 Transcript Type= NA
chr17	50965644	51120865	50965644	51120865	-	ENST00000357122.8@SPAG9	ENST00000357122.8	protein_coding	51120354,51079584,51056412,51047375,51041501,51021158,51020159,51014232,51007269,51006085,51005212,51001715,50999661,50998444,50996565,50995444,50995057,50993764,50990450,50989677,50987112,50985698,50984923,50982524,50979746,50977108,50974771,50970707,50965644	51120865,51079704,51056482,51047469,51041651,51021365,51020258,51014353,51007326,51006237,51005263,51001845,50999717,50998617,50996694,50995533,50995224,50993935,50990668,50989872,50987237,50985778,50984990,50982672,50979917,50977221,50974947,50970856,50966387	Gene ID= ENSG00000008294.20 TPM= 19.18 Transcript Type= protein_coding
chr17	51153576	51162061	51153576	51162061	+	ENST00000336097.7@NME1	ENST00000336097.7	protein_coding	51153576,51154225,51155651,51159980,51161160,51161728	51153662,51154444,51155780,51160081,51161272,51162061	Gene ID= ENSG00000239672.7 TPM= 2.92 Transcript Type= protein_coding
chr17	51153536	51162195	51153536	51162195	+	ENST00000393196.7@NME1	ENST00000393196.7	protein_coding	51153536,51155651,51159980,51161160,51161728	51153662,51155780,51160081,51161272,51162195	Gene ID= ENSG00000239672.7 TPM= 24.52 Transcript Type= protein_coding
chr17	51153590	51171744	51153590	51171744	+	ENST00000393193.6@NME1-NME2	ENST00000393193.6	protein_coding	51153590,51155651,51159980,51161160,51166827,51168242,51169937,51171487	51153662,51155780,51160081,51161272,51166956,51168343,51170049,51171744	Gene ID= ENSG00000011052.21 TPM= 8.37 Transcript Type= protein_coding
chr17	51166278	51171747	51166278	51171747	+	ENST00000512737.5@NME2	ENST00000512737.5	protein_coding	51166278,51166827,51168242,51169937,51171487	51166497,51166956,51168343,51170049,51171747	Gene ID= ENSG00000243678.11 TPM= 195.19 Transcript Type= protein_coding
chr17	51166420	51171744	51166420	51171744	+	ENST00000393183.7@NME2	ENST00000393183.7	protein_coding	51166420,51166827,51168242,51171487	51166497,51166956,51168343,51171744	Gene ID= ENSG00000243678.11 TPM= 1.75 Transcript Type= protein_coding
chr17	51166564	51171744	51166564	51171744	+	ENST00000393190.4@NME2	ENST00000393190.4	protein_coding	51166564,51168242,51169937,51171487	51166956,51168343,51170049,51171744	Gene ID= ENSG00000243678.11 TPM= 11.87 Transcript Type= protein_coding
chr17	51177425	51260066	51177425	51260066	-	ENST00000586178.5@MBTD1	ENST00000586178.5	protein_coding	51259835,51259143,51225008,51220330,51218930,51217334,51206888,51203791,51203140,51202701,51202022,51201592,51195214,51193428,51192782,51192203,51177425	51260066,51259206,51225209,51220463,51219044,51217416,51207005,51203925,51203228,51202935,51202077,51201696,51195361,51193510,51193016,51192280,51180694	Gene ID= ENSG00000011258.15 TPM= 1.17 Transcript Type= protein_coding
chr17	51183191	51186403	51183191	51186403	-	ENST00000624148.1@AC005839.1	ENST00000624148.1	TEC	51183191	51186403	Gene ID= ENSG00000279089.1 TPM= 1.17 Transcript Type= TEC
chr17	51260528	51297933	51260528	51297933	+	ENST00000225298.11@UTP18	ENST00000225298.11	protein_coding	51260528,51263274,51266182,51268837,51273362,51275866,51277130,51280005,51280389,51285245,51288029,51293903,51296965,51297782	51260926,51263386,51266280,51268904,51273450,51275991,51277304,51280105,51280479,51285368,51288203,51294045,51297003,51297933	Gene ID= ENSG00000011260.13 TPM= 66.55 Transcript Type= protein_coding
chr17	54900513	54961956	54900513	54961956	+	ENST00000575882.5@TOM1L1	ENST00000575882.5	protein_coding	54900513,54903708,54905489,54912666,54913748,54914639,54915746,54930073,54936649,54937109,54938924,54947261,54949518,54950045,54960566,54961235	54900923,54903792,54905567,54912815,54913873,54914743,54915862,54930206,54936709,54937226,54939020,54947312,54949623,54950126,54960627,54961956	Gene ID= ENSG00000141198.15 TPM= 19.85 Transcript Type= protein_coding
chr17	54899387	54937316	54899387	54937316	+	ENST00000570371.5@TOM1L1	ENST00000570371.5	protein_coding	54899387,54900394,54903708,54905489,54912666,54913748,54914639,54915746,54930073,54936649,54937109	54900233,54900923,54903792,54905567,54912815,54913873,54914743,54915862,54930206,54936709,54937316	Gene ID= ENSG00000141198.15 TPM= 3.5 Transcript Type= protein_coding
chr17	54900857	54938033	54900857	54938033	+	ENST00000575333.5@TOM1L1	ENST00000575333.5	protein_coding	54900857,54903708,54905489,54912666,54913748,54914639,54915746,54930073,54936649,54937109	54900923,54903792,54905567,54912815,54913873,54914743,54915862,54930206,54936709,54938033	Gene ID= ENSG00000141198.15 TPM= 2.34 Transcript Type= protein_coding
chr17	54961206	54968785	54961206	54968785	-	ENST00000299335.7@COX11	ENST00000299335.7	protein_coding	54968281,54964697,54963306,54961206	54968785,54964852,54963431,54962915	Gene ID= ENSG00000166260.11 TPM= 10.51 Transcript Type= protein_coding
chr17	54951935	54963414	54951935	54963414	-	ENST00000574821.1@COX11	ENST00000574821.1	protein_coding	54963306,54961119,54951935	54963414,54961326,54952112	Gene ID= ENSG00000166260.11 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr17	54951902	54968653	54951902	54968653	-	ENST00000576370.5@COX11	ENST00000576370.5	protein_coding	54968281,54964697,54963306,54961119,54951902	54968653,54964852,54963431,54962915,54952112	Gene ID= ENSG00000166260.11 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr17	54951903	54957051	54951903	54957051	-	transcript5408.chr17.nnic@NA	transcript5408.chr17.nnic	NA	54951903	54957051	Gene ID= novel_gene_chr17_5409 TPM= 2.34 Transcript Type= NA
chr17	54956800	54958746	54956800	54958746	+	transcript5406.chr17.nnic@NA	transcript5406.chr17.nnic	NA	54956800	54958746	Gene ID= novel_gene_chr17_5407 TPM= 5.84 Transcript Type= NA
chr17	55265012	55325065	55265012	55325065	+	ENST00000226067.9@HLF	ENST00000226067.9	protein_coding	55265012,55267751,55315227,55320664	55265599,55268086,55315447,55325065	Gene ID= ENSG00000108924.13 TPM= 15.18 Transcript Type= protein_coding
chr17	55392613	55421992	55392613	55421992	-	ENST00000262065.7@MMD	ENST00000262065.7	protein_coding	55421670,55414151,55411257,55407746,55403767,55401469,55392613	55421992,55414232,55411417,55407820,55403868,55401538,55394534	Gene ID= ENSG00000108960.7 TPM= 30.36 Transcript Type= protein_coding
chr17	55719627	55725667	55719627	55725667	-	transcript5434.chr17.nnic@TMEM100	transcript5434.chr17.nnic	protein_coding	55725488,55722619,55719627	55725667,55722729,55721135	Gene ID= ENSG00000166292.11 TPM= 9.34 Transcript Type= NA
chr17	55719905	55722864	55719905	55722864	-	transcript5437.chr17.nic@TMEM100	transcript5437.chr17.nic	protein_coding	55722619,55721532,55719905	55722864,55721818,55721135	Gene ID= ENSG00000166292.11 TPM= 2.34 Transcript Type= NA
chr17	55719627	55722856	55719627	55722856	-	ENST00000424486.2@TMEM100	ENST00000424486.2	protein_coding	55722619,55719627	55722856,55721135	Gene ID= ENSG00000166292.11 TPM= 31.53 Transcript Type= protein_coding
chr17	55750979	55777374	55750979	55777374	+	ENST00000268896.9@PCTP	ENST00000268896.9	protein_coding	55750979,55767335,55771106,55773724,55774792,55776035	55751244,55767452,55771185,55773895,55774859,55777374	Gene ID= ENSG00000141179.13 TPM= 40.28 Transcript Type= protein_coding
chr17	55751400	55777374	55751400	55777374	+	ENST00000325214.10@PCTP	ENST00000325214.10	protein_coding	55751400,55767335,55771106,55773724,55774792,55776035	55751477,55767452,55771185,55773895,55774859,55777374	Gene ID= ENSG00000141179.13 TPM= 1.75 Transcript Type= protein_coding
chr17	56593384	56595610	56593384	56595610	+	transcript5450.chr17.nnic@NA	transcript5450.chr17.nnic	NA	56593384	56595610	Gene ID= novel_gene_chr17_5451 TPM= 2.34 Transcript Type= NA
chr17	56827245	56830216	56827245	56830216	-	transcript5454.chr17.nnic@NA	transcript5454.chr17.nnic	NA	56827245	56830216	Gene ID= novel_gene_chr17_5455 TPM= 3.5 Transcript Type= NA
chr17	56828888	56830368	56828888	56830368	+	transcript5452.chr17.nnic@NA	transcript5452.chr17.nnic	NA	56828888	56830368	Gene ID= novel_gene_chr17_5453 TPM= 2.34 Transcript Type= NA
chr17	56832904	56833682	56832904	56833682	-	transcript5458.chr17.nnic@NA	transcript5458.chr17.nnic	NA	56832904	56833682	Gene ID= novel_gene_chr17_5459 TPM= 2.34 Transcript Type= NA
chr17	56834099	56869567	56834099	56869567	+	ENST00000284061.7@DGKE	ENST00000284061.7	protein_coding	56834099,56834778,56844019,56845690,56847922,56848696,56849181,56856512,56858594,56861791,56862140,56862612	56834260,56835259,56844178,56845809,56848065,56848853,56849232,56856625,56858665,56861918,56862251,56869567	Gene ID= ENSG00000153933.9 TPM= 2.34 Transcript Type= protein_coding
chr17	56834169	56865827	56834169	56865827	+	transcript5462.chr17.nic@DGKE	transcript5462.chr17.nic	protein_coding	56834169,56834778,56844019,56845690,56847922,56848696,56849181,56856512,56858594,56861791,56862140	56834260,56835259,56844178,56845809,56848065,56848853,56849232,56856625,56858665,56861918,56865827	Gene ID= ENSG00000153933.9 TPM= 2.34 Transcript Type= NA
chr17	56888499	56891423	56888499	56891423	-	transcript5472.chr17.nic@TRIM25	transcript5472.chr17.nic	protein_coding	56891364,56888499	56891423,56891300	Gene ID= ENSG00000121060.16 TPM= 3.5 Transcript Type= NA
chr17	56887909	56914038	56887909	56914038	-	ENST00000316881.8@TRIM25	ENST00000316881.8	protein_coding	56913392,56908468,56904255,56901419,56899115,56895926,56895521,56895343,56887909	56914038,56908563,56904488,56901578,56899180,56895952,56895604,56895441,56892229	Gene ID= ENSG00000121060.16 TPM= 31.53 Transcript Type= protein_coding
chr17	56894979	56896356	56894979	56896356	+	transcript5473.chr17.nnic@NA	transcript5473.chr17.nnic	NA	56894979	56896356	Gene ID= novel_gene_chr17_5474 TPM= 3.5 Transcript Type= NA
chr17	56914186	56914533	56914186	56914533	+	ENST00000619432.1@AC015912.3	ENST00000619432.1	lincRNA	56914186	56914533	Gene ID= ENSG00000274213.1 TPM= 1.17 Transcript Type= lincRNA
chr17	56938187	56961054	56938187	56961054	-	ENST00000240316.4@COIL	ENST00000240316.4	protein_coding	56960775,56949889,56949681,56949387,56946442,56942035,56938187	56961054,56950996,56949767,56949434,56946511,56942123,56939154	Gene ID= ENSG00000121058.4 TPM= 53.71 Transcript Type= protein_coding
chr17	56938187	56961052	56938187	56961052	-	transcript5476.chr17.nic@COIL	transcript5476.chr17.nic	protein_coding	56960775,56949387,56946442,56942035,56938187	56961052,56950996,56946511,56942123,56939154	Gene ID= ENSG00000121058.4 TPM= 2.34 Transcript Type= NA
chr17	56948133	56961052	56948133	56961052	-	transcript5477.chr17.nic@COIL	transcript5477.chr17.nic	protein_coding	56960775,56948133	56961052,56950996	Gene ID= ENSG00000121058.4 TPM= 2.34 Transcript Type= NA
chr17	56978096	57006763	56978096	57006763	+	transcript5484.chr17.nic@SCPEP1	transcript5484.chr17.nic	protein_coding	56978096,56981082,56985378,56987695,56988216,56991099,56994981,56995507,56996962,57000855,57002018,57006173	56978235,56981230,56985467,56987850,56988290,56991171,56995018,56995635,56997055,57000992,57002181,57006763	Gene ID= ENSG00000121064.12 TPM= 9.1 Transcript Type= NA
chr17	56978105	57006763	56978105	57006763	+	ENST00000262288.7@SCPEP1	ENST00000262288.7	protein_coding	56978105,56981082,56985378,56987695,56988216,56991099,56994981,56995507,56996962,56998385,57000855,57002018,57006173	56978235,56981230,56985467,56987850,56988290,56991171,56995018,56995635,56997055,56998498,57000992,57002181,57006763	Gene ID= ENSG00000121064.12 TPM= 231.13 Transcript Type= protein_coding
chr17	57085225	57121342	57085225	57121342	+	transcript5496.chr17.nnic@AKAP1	transcript5496.chr17.nnic	protein_coding	57085225,57086373,57105441,57110025,57111798,57112491,57114459,57116111,57116860,57118381,57118982,57120250	57085398,57086537,57107178,57110158,57111924,57112618,57114636,57116261,57116927,57118454,57119044,57121342	Gene ID= ENSG00000121057.12 TPM= 8.17 Transcript Type= NA
chr17	57085241	57121248	57085241	57121248	+	transcript5504.chr17.nic@AKAP1	transcript5504.chr17.nic	protein_coding	57085241,57105441,57111798,57112491,57114459,57116111,57116860,57118381,57118982,57120250	57085398,57110158,57111924,57112618,57114636,57116261,57116927,57118454,57119044,57121248	Gene ID= ENSG00000121057.12 TPM= 9.34 Transcript Type= NA
chr17	57085190	57121349	57085190	57121349	+	ENST00000337714.7@AKAP1	ENST00000337714.7	protein_coding	57085190,57105441,57110025,57111798,57112491,57114459,57116111,57116860,57118381,57118982,57120250	57085398,57107178,57110158,57111924,57112618,57114636,57116261,57116927,57118454,57119044,57121349	Gene ID= ENSG00000121057.12 TPM= 64.22 Transcript Type= protein_coding
chr17	57287133	57290542	57287133	57290542	-	transcript5507.chr17.nnic@NA	transcript5507.chr17.nnic	NA	57287133	57290542	Gene ID= novel_gene_chr17_5508 TPM= 2.34 Transcript Type= NA
chr17	57478047	57483279	57478047	57483279	+	transcript5509.chr17.nnic@NA	transcript5509.chr17.nnic	NA	57478047	57483279	Gene ID= novel_gene_chr17_5510 TPM= 2.34 Transcript Type= NA
chr17	57682754	57684607	57682754	57684607	+	transcript5511.chr17.nnic@NA	transcript5511.chr17.nnic	NA	57682754	57684607	Gene ID= novel_gene_chr17_5512 TPM= 2.34 Transcript Type= NA
chr17	57861604	57955412	57861604	57955412	-	transcript5519.chr17.nic@CUEDC1	transcript5519.chr17.nic	protein_coding	57955225,57885229,57879611,57873591,57872663,57871286,57869122,57866474,57861604	57955412,57885879,57879738,57873717,57872855,57871369,57869193,57868243,57863285	Gene ID= ENSG00000180891.12 TPM= 64.22 Transcript Type= NA
chr17	57874279	57877591	57874279	57877591	+	transcript5530.chr17.nnic@NA	transcript5530.chr17.nnic	NA	57874279	57877591	Gene ID= novel_gene_chr17_5531 TPM= 2.34 Transcript Type= NA
chr17	57971547	57988431	57971547	57988431	-	transcript5537.chr17.nic@VEZF1	transcript5537.chr17.nic	protein_coding	57988079,57982699,57981873,57980603,57979152,57971547	57988431,57983393,57981936,57980804,57979313,57974900	Gene ID= ENSG00000136451.8 TPM= 9.34 Transcript Type= NA
chr17	57973759	57988152	57973759	57988152	-	ENST00000581208.1@VEZF1	ENST00000581208.1	protein_coding	57988079,57982699,57981873,57980603,57979152,57973759	57988152,57983393,57981936,57980786,57979313,57974900	Gene ID= ENSG00000136451.8 TPM= 2.34 Transcript Type= protein_coding
chr17	58003493	58007346	58003493	58007346	-	transcript5543.chr17.nic@SRSF1	transcript5543.chr17.nic	protein_coding	58006944,58006343,58005801,58004923,58003493	58007346,58006527,58005973,58005600,58004001	Gene ID= ENSG00000136450.12 TPM= 16.35 Transcript Type= NA
chr17	58003360	58007261	58003360	58007261	-	ENST00000582730.6@SRSF1	ENST00000582730.6	protein_coding	58006944,58006343,58003360	58007261,58006527,58005973	Gene ID= ENSG00000136450.12 TPM= 5.84 Transcript Type= protein_coding
chr17	58083415	58095536	58083415	58095536	+	ENST00000579991.2@DYNLL2	ENST00000579991.2	protein_coding	58083415,58087082,58089142	58083683,58087222,58095536	Gene ID= ENSG00000264364.2 TPM= 1.17 Transcript Type= protein_coding
chr17	58205437	58219305	58205437	58219305	-	ENST00000393119.6@MKS1	ENST00000393119.6	protein_coding	58219151,58218620,58216666,58216088,58214741,58214259,58213765,58212982,58212378,58210980,58210659,58208513,58208105,58207894,58207085,58206465,58206283,58205437	58219305,58218729,58216736,58216243,58214838,58214387,58213869,58213090,58212434,58211022,58210724,58208583,58208174,58208001,58207218,58206547,58206380,58206170	Gene ID= ENSG00000011143.16 TPM= 7.01 Transcript Type= protein_coding
chr17	58205437	58219255	58205437	58219255	-	transcript5559.chr17.nic@MKS1	transcript5559.chr17.nic	protein_coding	58219151,58218620,58216666,58216088,58214741,58214259,58213765,58212982,58212378,58210980,58210659,58208513,58208105,58207894,58207085,58206465,58206283,58205437	58219255,58218729,58216736,58216243,58214898,58214387,58213869,58213090,58212434,58211022,58210724,58208583,58208174,58208001,58207218,58206547,58206380,58206170	Gene ID= ENSG00000011143.16 TPM= 2.34 Transcript Type= NA
chr17	58330884	58332508	58330884	58332508	-	ENST00000579003.1@AC004687.1	ENST00000579003.1	antisense_RNA	58330884	58332508	Gene ID= ENSG00000265206.5 TPM= 3.5 Transcript Type= antisense_RNA
chr17	58353676	58417581	58353676	58417581	-	transcript5577.chr17.nic@RNF43	transcript5577.chr17.nic	protein_coding	58417017,58370911,58363526,58363275,58362544,58360783,58360149,58357468,58353676	58417581,58371033,58363600,58363406,58362648,58360944,58360251,58358823,58354986	Gene ID= ENSG00000108375.12 TPM= 9.34 Transcript Type= NA
chr17	58489537	58517905	58489537	58517905	-	ENST00000323456.9@MTMR4	ENST00000323456.9	protein_coding	58517817,58516580,58512852,58512390,58511429,58508681,58508468,58508161,58507123,58506743,58505472,58504779,58504303,58504050,58503744,58494932,58492842,58492511,58489537	58517905,58516618,58512941,58512506,58511511,58508841,58508564,58508274,58507319,58506871,58505583,58504974,58504488,58504220,58503898,58496330,58492952,58492599,58491840	Gene ID= ENSG00000108389.9 TPM= 58.38 Transcript Type= protein_coding
chr17	58489537	58514607	58489537	58514607	-	transcript5582.chr17.nic@MTMR4	transcript5582.chr17.nic	protein_coding	58514363,58512852,58512390,58511429,58508681,58508468,58508161,58507123,58506743,58505472,58504779,58504303,58504050,58503744,58494932,58492842,58492511,58489537	58514607,58512941,58512506,58511511,58508841,58508564,58508274,58507319,58506871,58505583,58504974,58504488,58504220,58503898,58496330,58492952,58492599,58491840	Gene ID= ENSG00000108389.9 TPM= 53.71 Transcript Type= NA
chr17	58520256	58532078	58520256	58532078	-	transcript5589.chr17.nic@SEPT4	transcript5589.chr17.nic	protein_coding	58531961,58531480,58526682,58526220,58525695,58525078,58521967,58521736,58521545,58521254,58520998,58520743,58520256	58532078,58531551,58526978,58526313,58525781,58525201,58522101,58521853,58521646,58521350,58521160,58520842,58520485	Gene ID= ENSG00000108387.14 TPM= 7.47 Transcript Type= NA
chr17	58520256	58529351	58520256	58529351	-	ENST00000317268.7@SEPT4	ENST00000317268.7	protein_coding	58529115,58526682,58526220,58525695,58525078,58521967,58521736,58521545,58521254,58520998,58520743,58520256	58529351,58526978,58526313,58525781,58525201,58522101,58521853,58521646,58521350,58521160,58520842,58520485	Gene ID= ENSG00000108387.14 TPM= 15.65 Transcript Type= protein_coding
chr17	58520256	58532112	58520256	58532112	-	transcript5593.chr17.nic@SEPT4	transcript5593.chr17.nic	protein_coding	58531961,58526932,58526220,58525695,58525078,58521967,58521736,58521545,58521254,58520998,58520743,58520256	58532112,58526978,58526313,58525781,58525201,58522101,58521853,58521646,58521350,58521160,58520842,58520485	Gene ID= ENSG00000108387.14 TPM= 7.47 Transcript Type= NA
chr17	58520256	58532078	58520256	58532078	-	transcript5595.chr17.nic@SEPT4	transcript5595.chr17.nic	protein_coding	58531961,58531480,58526220,58525695,58525078,58521967,58521736,58521545,58521254,58520998,58520743,58520256	58532078,58531551,58526313,58525781,58525201,58522101,58521853,58521646,58521350,58521160,58520842,58520485	Gene ID= ENSG00000108387.14 TPM= 12.14 Transcript Type= NA
chr17	58520256	58532078	58520256	58532078	-	transcript5596.chr17.nnic@SEPT4	transcript5596.chr17.nnic	protein_coding	58531961,58531480,58526220,58525695,58525078,58521736,58521545,58521254,58520942,58520743,58520256	58532078,58531551,58526410,58525781,58525217,58522101,58521646,58521350,58521160,58520842,58520485	Gene ID= ENSG00000108387.14 TPM= 2.34 Transcript Type= NA
chr17	58520256	58532060	58520256	58532060	-	transcript5599.chr17.nic@SEPT4	transcript5599.chr17.nic	protein_coding	58531961,58526220,58525695,58525078,58521967,58521736,58521545,58521254,58520998,58520743,58520256	58532060,58526313,58525781,58525201,58522101,58521853,58521646,58521350,58521160,58520842,58520485	Gene ID= ENSG00000108387.14 TPM= 22.65 Transcript Type= NA
chr17	58520299	58529303	58520299	58529303	-	ENST00000580844.5@SEPT4	ENST00000580844.5	protein_coding	58529115,58526220,58525695,58525078,58521967,58521736,58521545,58521254,58520998,58520743,58520299	58529303,58526313,58525781,58525201,58522101,58521853,58521646,58521350,58521160,58520842,58520485	Gene ID= ENSG00000108387.14 TPM= 14.01 Transcript Type= protein_coding
chr17	58529804	58532064	58529804	58532064	-	transcript5613.chr17.nnic@NA	transcript5613.chr17.nnic	NA	58529804	58532064	Gene ID= novel_gene_chr17_5614 TPM= 3.5 Transcript Type= NA
chr17	58692573	58735611	58692573	58735611	+	ENST00000337432.8@RAD51C	ENST00000337432.8	protein_coding	58692573,58694931,58696693,58703196,58709859,58720746,58724040,58732484,58734118	58692788,58695189,58696859,58703329,58709990,58720812,58724100,58732544,58735611	Gene ID= ENSG00000108384.14 TPM= 4.67 Transcript Type= protein_coding
chr17	58692628	58695336	58692628	58695336	+	ENST00000421782.3@RAD51C	ENST00000421782.3	protein_coding	58692628,58694931	58692788,58695336	Gene ID= ENSG00000108384.14 TPM= 3.5 Transcript Type= protein_coding
chr17	58982651	59106921	58982651	59106921	-	ENST00000393066.7@TRIM37	ENST00000393066.7	protein_coding	59106441,59104293,59091300,59088291,59084002,59081097,59079754,59075647,59070823,59064355,59062567,59061032,59056875,59051214,59049178,59047683,59041813,59031896,59028415,59017296,59015610,59012328,59001598,58999381,58982651	59106921,59104394,59091340,59088407,59084089,59081219,59079877,59075714,59070947,59064405,59062648,59061108,59057054,59051328,59049393,59047819,59041898,59032090,59028723,59017424,59015799,59012446,59001714,58999459,58982921	Gene ID= ENSG00000108395.13 TPM= 3.5 Transcript Type= protein_coding
chr17	58998202	59106885	58998202	59106885	-	transcript5628.chr17.nic@TRIM37	transcript5628.chr17.nic	protein_coding	59106441,59104293,59091300,59088291,59084002,59081097,59079754,59075647,59070823,59064355,59062567,59061032,59056875,59051214,59049178,59047683,59041813,59031896,59028415,59017296,59015610,59012328,59001598,58998202	59106885,59104394,59091340,59088407,59084089,59081219,59079877,59075714,59070947,59064405,59062648,59061108,59057054,59051328,59049393,59047819,59041898,59032090,59028723,59017424,59015799,59012446,59001741,58999459	Gene ID= ENSG00000108395.13 TPM= 4.67 Transcript Type= NA
chr17	58998200	59106885	58998200	59106885	-	transcript5629.chr17.nic@TRIM37	transcript5629.chr17.nic	protein_coding	59106441,59104293,59091300,59088291,59084002,59081097,59079754,59075647,59070823,59064355,59062567,59061032,59056875,59051214,59049178,59047683,59041813,59031896,59028415,59017296,59015610,59012328,58998200	59106885,59104394,59091340,59088407,59084089,59081219,59079877,59075714,59070947,59064405,59062648,59061108,59057054,59051328,59049393,59047819,59041898,59032090,59028723,59017424,59015799,59012446,58999459	Gene ID= ENSG00000108395.13 TPM= 3.5 Transcript Type= NA
chr17	58998202	59106721	58998202	59106721	-	ENST00000262294.11@TRIM37	ENST00000262294.11	protein_coding	59106441,59104293,59091300,59088291,59084002,59081097,59079754,59075647,59070823,59064355,59062567,59061032,59056875,59051214,59049178,59047683,59041813,59031896,59028415,59017296,59015610,59012328,59001598,58998202	59106721,59104394,59091340,59088407,59084089,59081219,59079877,59075714,59070947,59064405,59062648,59061108,59057054,59051328,59049393,59047819,59041898,59032090,59028723,59017424,59015799,59012446,59001714,58999459	Gene ID= ENSG00000108395.13 TPM= 23.35 Transcript Type= protein_coding
chr17	59109951	59155269	59109951	59155269	-	ENST00000330137.11@SKA2	ENST00000330137.11	protein_coding	59155131,59131281,59119319,59109951	59155269,59131367,59119495,59112345	Gene ID= ENSG00000182628.12 TPM= 4.67 Transcript Type= protein_coding
chr17	59111943	59155260	59111943	59155260	-	ENST00000583927.1@SKA2	ENST00000583927.1	protein_coding	59155131,59111943	59155260,59112345	Gene ID= ENSG00000182628.12 TPM= 1.17 Transcript Type= processed_transcript
chr17	59220473	59274512	59220473	59274512	+	ENST00000284116.8@GDPD1	ENST00000284116.8	protein_coding	59220473,59234492,59245414,59248740,59257122,59257751,59267041,59270936,59272785,59273651	59220751,59234534,59245549,59248785,59257240,59257840,59267174,59270995,59272836,59274512	Gene ID= ENSG00000153982.10 TPM= 1.17 Transcript Type= protein_coding
chr17	59331702	59401729	59331702	59401729	+	ENST00000312655.8@YPEL2	ENST00000312655.8	protein_coding	59331702,59353215,59388327,59389360,59397101	59331824,59353526,59388370,59389468,59401729	Gene ID= ENSG00000175155.8 TPM= 18.68 Transcript Type= protein_coding
chr17	59331721	59356303	59331721	59356303	+	ENST00000582192.1@YPEL2	ENST00000582192.1	protein_coding	59331721,59353215	59331824,59356303	Gene ID= ENSG00000175155.8 TPM= 2.34 Transcript Type= retained_intron
chr17	59565525	59608345	59565525	59608345	+	ENST00000251241.8@DHX40	ENST00000251241.8	protein_coding	59565525,59566627,59570518,59573116,59573740,59574188,59575340,59577266,59579472,59579697,59586153,59587896,59598737,59599375,59602522,59605115,59605446,59607033	59565783,59566794,59570663,59573235,59573967,59574254,59575471,59577365,59579558,59579879,59586233,59588053,59598851,59599483,59602616,59605184,59605674,59608345	Gene ID= ENSG00000108406.9 TPM= 54.88 Transcript Type= protein_coding
chr17	59565589	59607559	59565589	59607559	+	transcript5674.chr17.nic@DHX40	transcript5674.chr17.nic	protein_coding	59565589,59566627,59573116,59573740,59574188,59575340,59577266,59579472,59579697,59586153,59587896,59598737,59599375,59602522,59605115,59605446,59607033	59565783,59566794,59573235,59573967,59574254,59575471,59577365,59579558,59579879,59586233,59588053,59598851,59599483,59602616,59605184,59605674,59607559	Gene ID= ENSG00000108406.9 TPM= 2.34 Transcript Type= NA
chr17	59619676	59695112	59619676	59695112	+	transcript5658.chr17.nic@CLTC	transcript5658.chr17.nic	protein_coding	59619676,59644276,59647398,59648240,59651203,59655854,59660391,59661443,59663842,59664787,59666103,59666480,59666797,59668777,59673647,59674701,59676954,59679397,59680912,59681295,59681647,59682271,59682629,59682907,59683095,59683387,59683625,59683875,59685056,59685587,59687001,59690636,59693728	59620173,59644483,59647666,59648401,59651316,59656027,59660588,59661643,59663994,59664909,59666240,59666644,59666977,59668940,59673772,59674843,59677188,59679519,59681057,59681478,59681839,59682428,59682793,59683014,59683262,59683536,59683756,59683985,59685226,59685808,59687021,59690711,59695112	Gene ID= ENSG00000141367.11 TPM= 21.02 Transcript Type= NA
chr17	59697308	59707626	59697308	59707626	-	ENST00000409433.2@PTRH2	ENST00000409433.2	protein_coding	59707371,59698871,59697308	59707626,59700189,59697978	Gene ID= ENSG00000141378.14 TPM= 1.17 Transcript Type= protein_coding
chr17	59697306	59707598	59697306	59707598	-	ENST00000393038.2@PTRH2	ENST00000393038.2	protein_coding	59707371,59697306	59707598,59697978	Gene ID= ENSG00000141378.14 TPM= 17.51 Transcript Type= protein_coding
chr17	59707654	59840593	59707654	59840593	+	transcript5678.chr17.nic@VMP1	transcript5678.chr17.nic	protein_coding	59707654,59731421,59735338,59737453,59738837,59764971,59773754,59808796,59811670,59817712,59834012,59838295,59839768	59707748,59731522,59735473,59737543,59738947,59765138,59773885,59808876,59811786,59817773,59834050,59838397,59840593	Gene ID= ENSG00000062716.12 TPM= 4.67 Transcript Type= NA
chr17	59707465	59841092	59707465	59841092	+	ENST00000262291.8@VMP1	ENST00000262291.8	protein_coding	59707465,59731421,59735338,59737453,59738837,59764971,59773754,59808796,59811670,59817712,59838295,59839768	59707748,59731522,59735473,59737543,59738947,59765138,59773885,59808876,59811786,59817773,59838397,59841092	Gene ID= ENSG00000062716.12 TPM= 88.74 Transcript Type= protein_coding
chr17	59707665	59840593	59707665	59840593	+	transcript5684.chr17.nnic@VMP1	transcript5684.chr17.nnic	protein_coding	59707665,59731421,59735338,59737453,59738837,59764971,59773754,59811670,59817712,59838295,59839768	59707748,59731522,59735473,59737543,59738947,59765138,59773885,59811786,59817773,59838397,59840593	Gene ID= ENSG00000062716.12 TPM= 3.5 Transcript Type= NA
chr17	59837888	59840591	59837888	59840591	+	transcript5703.chr17.nnic@NA	transcript5703.chr17.nnic	NA	59837888	59840591	Gene ID= novel_gene_chr17_5704 TPM= 340.94 Transcript Type= NA
chr17	59859482	59892897	59859482	59892897	-	transcript5724.chr17.nic@TUBD1	transcript5724.chr17.nic	protein_coding	59892697,59886083,59878103,59874539,59866609,59863664,59859482	59892897,59886230,59878334,59874703,59866749,59863847,59860424	Gene ID= ENSG00000108423.14 TPM= 3.5 Transcript Type= NA
chr17	59893094	59950421	59893094	59950421	+	transcript5707.chr17.nic@RPS6KB1	transcript5707.chr17.nic	protein_coding	59893094,59910562,59912684,59914635,59926435,59930117,59930358,59931622,59934170,59934434,59935193,59936215,59936464,59940836,59945406,59946551	59893325,59910611,59912804,59914703,59926582,59930174,59930432,59931722,59934260,59934524,59935300,59936277,59936541,59940943,59945518,59950421	Gene ID= ENSG00000108443.13 TPM= 2.34 Transcript Type= NA
chr17	59893046	59950421	59893046	59950421	+	ENST00000393021.7@RPS6KB1	ENST00000393021.7	protein_coding	59893046,59893796,59910562,59912684,59914635,59926435,59930117,59931622,59934170,59934434,59935193,59936215,59936464,59940836,59945406,59946551	59893325,59893924,59910611,59912804,59914703,59926582,59930174,59931722,59934260,59934524,59935300,59936277,59936541,59940943,59945518,59950421	Gene ID= ENSG00000108443.13 TPM= 2.34 Transcript Type= protein_coding
chr17	59938140	59940743	59938140	59940743	-	transcript5735.chr17.nnic@NA	transcript5735.chr17.nnic	NA	59938140	59940743	Gene ID= novel_gene_chr17_5736 TPM= 2.34 Transcript Type= NA
chr17	59952362	59964786	59952362	59964786	-	transcript5723.chr17.nic@RNFT1	transcript5723.chr17.nic	protein_coding	59964608,59962827,59962540,59958291,59957224,59956488,59954045,59952362	59964786,59963284,59962616,59960168,59957382,59956553,59954146,59953111	Gene ID= ENSG00000189050.15 TPM= 14.01 Transcript Type= NA
chr17	59952240	59964719	59952240	59964719	-	ENST00000305783.12@RNFT1	ENST00000305783.12	protein_coding	59964608,59962827,59962540,59960068,59958291,59957224,59956488,59954045,59952240	59964719,59963284,59962616,59960168,59958444,59957382,59956553,59954146,59953111	Gene ID= ENSG00000189050.15 TPM= 7.01 Transcript Type= protein_coding
chr17	59952362	59964734	59952362	59964734	-	ENST00000482446.5@RNFT1	ENST00000482446.5	protein_coding	59964608,59962827,59962540,59958291,59957224,59956488,59954045,59952362	59964734,59963284,59962616,59958444,59957382,59956553,59954146,59953111	Gene ID= ENSG00000189050.15 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr17	59952396	59964761	59952396	59964761	-	ENST00000466544.5@RNFT1	ENST00000466544.5	protein_coding	59964608,59962827,59958291,59957224,59956488,59954045,59952396	59964761,59963284,59958444,59957382,59956553,59954146,59953111	Gene ID= ENSG00000189050.15 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr17	60043194	60078927	60043194	60078927	-	transcript5739.chr17.nic@HEATR6	transcript5739.chr17.nic	protein_coding	60078696,60076130,60073746,60073164,60072215,60070706,60069711,60067434,60066209,60059890,60059422,60057048,60056115,60055515,60050843,60049580,60048264,60047309,60046025,60043194	60078927,60076237,60074159,60073279,60072329,60070807,60069848,60067732,60066386,60060096,60059521,60057403,60056237,60055601,60050977,60049702,60048388,60047405,60046229,60044134	Gene ID= ENSG00000068097.14 TPM= 3.5 Transcript Type= NA
chr17	60043194	60078931	60043194	60078931	-	ENST00000184956.10@HEATR6	ENST00000184956.10	protein_coding	60078696,60076130,60073746,60073164,60072215,60070706,60069711,60067434,60066209,60059890,60059422,60057048,60056115,60055515,60050843,60049580,60048264,60047309,60046025,60043194	60078931,60076237,60073886,60073279,60072329,60070807,60069848,60067732,60066386,60060096,60059521,60057403,60056237,60055601,60050977,60049702,60048388,60047405,60046229,60044134	Gene ID= ENSG00000068097.14 TPM= 15.18 Transcript Type= protein_coding
chr17	60083566	60088372	60083566	60088372	-	transcript5747.chr17.nic@WFDC21P	transcript5747.chr17.nic	processed_transcript	60088197,60085113,60083566	60088372,60085203,60083766	Gene ID= ENSG00000261040.6 TPM= 2.34 Transcript Type= NA
chr17	60126535	60135682	60126535	60135682	-	transcript5748.chr17.nnic@AC025048.2	transcript5748.chr17.nnic	processed_transcript	60134756,60132436,60126535	60135682,60132512,60126865	Gene ID= ENSG00000267248.1 TPM= 2.34 Transcript Type= NA
chr17	60122646	60134911	60122646	60134911	-	transcript5749.chr17.nnic@AC025048.2	transcript5749.chr17.nnic	processed_transcript	60134756,60122646	60134911,60123568	Gene ID= ENSG00000267248.1 TPM= 3.5 Transcript Type= NA
chr17	60127263	60129793	60127263	60129793	+	transcript5750.chr17.nnic@NA	transcript5750.chr17.nnic	NA	60127263	60129793	Gene ID= novel_gene_chr17_5751 TPM= 3.5 Transcript Type= NA
chr17	60149936	60172559	60149936	60172559	+	transcript5759.chr17.nnic@CA4	transcript5759.chr17.nnic	protein_coding	60149936,60155314,60156560,60157427,60157690,60158061,60158283,60159230,60170551	60150092,60155367,60156715,60157572,60157788,60158127,60158446,60159500,60172559	Gene ID= ENSG00000167434.9 TPM= 2.34 Transcript Type= NA
chr17	60149973	60159546	60149973	60159546	+	transcript5761.chr17.nic@CA4	transcript5761.chr17.nic	protein_coding	60149973,60155314,60156560,60157427,60157690,60157989,60158283,60159230	60150092,60155367,60156715,60157572,60157788,60158127,60158446,60159546	Gene ID= ENSG00000167434.9 TPM= 5.25 Transcript Type= NA
chr17	60149936	60159540	60149936	60159540	+	ENST00000300900.8@CA4	ENST00000300900.8	protein_coding	60149936,60155314,60156560,60157427,60157690,60158061,60158283,60159230	60150092,60155367,60156715,60157572,60157788,60158127,60158446,60159540	Gene ID= ENSG00000167434.9 TPM= 55.46 Transcript Type= protein_coding
chr17	60179094	60392134	60179094	60392134	-	ENST00000300896.8@USP32	ENST00000300896.8	protein_coding	60391882,60345481,60301599,60294683,60288523,60271350,60269450,60265976,60265412,60255175,60252381,60236138,60226039,60223411,60222409,60219670,60214620,60213581,60212024,60211376,60211013,60209370,60208654,60208059,60207021,60205447,60198260,60192844,60190563,60185460,60183165,60181324,60180545,60179094	60392134,60345608,60301704,60294801,60288682,60271481,60269557,60266091,60265474,60255258,60252442,60236240,60226231,60223586,60222549,60219787,60214774,60213662,60212098,60211514,60211118,60209543,60208828,60208210,60207132,60205658,60198444,60192930,60190683,60185651,60183453,60181748,60180637,60179428	Gene ID= ENSG00000170832.12 TPM= 5.84 Transcript Type= protein_coding
chr17	60297449	60298585	60297449	60298585	-	transcript5774.chr17.nnic@NA	transcript5774.chr17.nnic	NA	60297449	60298585	Gene ID= novel_gene_chr17_5775 TPM= 2.34 Transcript Type= NA
chr17	60421208	60422337	60421208	60422337	-	ENST00000590297.1@USP32	ENST00000590297.1	protein_coding	60422246,60421208	60422337,60421551	Gene ID= ENSG00000170832.12 TPM= 1.17 Transcript Type= protein_coding
chr17	60443149	60526219	60443149	60526219	-	ENST00000083182.7@APPBP2	ENST00000083182.7	protein_coding	60525794,60500399,60494466,60479148,60466291,60464021,60461994,60461810,60460663,60456296,60454302,60451880,60443149	60526219,60500487,60494617,60479271,60466459,60464110,60462061,60461915,60460787,60456381,60454492,60452045,60447834	Gene ID= ENSG00000062725.9 TPM= 8.17 Transcript Type= protein_coding
chr17	60600214	60666280	60600214	60666280	+	transcript5798.chr17.nnic@PPM1D	transcript5798.chr17.nnic	protein_coding	60600214,60623521,60647892,60656599,60662995	60600886,60623749,60648082,60656841,60666280	Gene ID= ENSG00000170836.11 TPM= 2.34 Transcript Type= NA
chr17	60600300	60666280	60600300	60666280	+	transcript5799.chr17.nnic@PPM1D	transcript5799.chr17.nnic	protein_coding	60600300,60647892,60656599,60662995	60600886,60648082,60656841,60666280	Gene ID= ENSG00000170836.11 TPM= 2.34 Transcript Type= NA
chr17	60600183	60666280	60600183	60666280	+	ENST00000305921.7@PPM1D	ENST00000305921.7	protein_coding	60600183,60623521,60633853,60647892,60656599,60662995	60600886,60623749,60633977,60648082,60656841,60666280	Gene ID= ENSG00000170836.11 TPM= 12.84 Transcript Type= protein_coding
chr17	61393457	61396365	61393457	61396365	-	transcript5826.chr17.nnic@AC005746.2	transcript5826.chr17.nnic	antisense_RNA	61396009,61393457	61396365,61393747	Gene ID= ENSG00000267131.1 TPM= 4.67 Transcript Type= NA
chr17	61393456	61396366	61393456	61396366	-	transcript5831.chr17.nnic@NA	transcript5831.chr17.nnic	NA	61393456	61396366	Gene ID= novel_gene_chr17_5832 TPM= 7.01 Transcript Type= NA
chr17	61393458	61399588	61393458	61399588	-	ENST00000591313.5@TBX2-AS1	ENST00000591313.5	antisense_RNA	61399239,61393458	61399588,61393747	Gene ID= ENSG00000267280.5 TPM= 1.17 Transcript Type= antisense_RNA
chr17	61393457	61399606	61393457	61399606	-	ENST00000590421.1@TBX2-AS1	ENST00000590421.1	antisense_RNA	61399037,61393457	61399606,61393747	Gene ID= ENSG00000267280.5 TPM= 4.67 Transcript Type= antisense_RNA
chr17	61399910	61409466	61399910	61409466	+	ENST00000419047.5@TBX2	ENST00000419047.5	protein_coding	61399910,61401706,61403061,61404421,61404606,61405202,61408054	61400571,61401951,61403207,61404497,61404769,61405836,61409466	Gene ID= ENSG00000121068.13 TPM= 17.32 Transcript Type= nonsense_mediated_decay
chr17	61399896	61409425	61399896	61409425	+	ENST00000240328.3@TBX2	ENST00000240328.3	protein_coding	61399896,61401684,61403061,61404421,61404606,61405202,61408054	61400571,61401951,61403207,61404497,61404769,61405836,61409425	Gene ID= ENSG00000121068.13 TPM= 64.6 Transcript Type= protein_coding
chr17	61452418	61485110	61452418	61485110	+	ENST00000393853.8@TBX4	ENST00000393853.8	protein_coding	61452418,61456488,61457537,61465819,61467510,61478627,61479881,61480090,61482897	61452577,61456676,61457631,61465938,61467657,61478779,61479969,61480319,61485110	Gene ID= ENSG00000121075.9 TPM= 58.38 Transcript Type= protein_coding
chr17	61453241	61456211	61453241	61456211	-	transcript5838.chr17.nnic@NA	transcript5838.chr17.nnic	NA	61453241	61456211	Gene ID= novel_gene_chr17_5839 TPM= 2.34 Transcript Type= NA
chr17	61865370	61928016	61865370	61928016	-	ENST00000444766.7@INTS2	ENST00000444766.7	protein_coding	61927935,61926352,61924961,61921725,61919400,61911940,61911520,61907408,61904460,61897668,61897469,61895315,61893765,61891513,61889786,61884901,61881007,61877887,61874913,61872265,61869737,61869273,61869034,61867833,61865370	61928016,61926662,61925099,61921827,61919513,61912070,61911693,61907634,61904585,61897739,61897583,61895383,61893899,61891689,61889894,61885005,61881171,61878088,61875038,61872460,61869988,61869380,61869139,61868009,61867726	Gene ID= ENSG00000108506.11 TPM= 8.17 Transcript Type= protein_coding
chr17	61942605	62065282	61942605	62065282	-	ENST00000397786.6@MED13	ENST00000397786.6	protein_coding	62065140,62063067,62052537,62035463,62033787,62031444,62029851,62029541,62010550,61995152,61992540,61987007,61985000,61984651,61984171,61982198,61972727,61968035,61966462,61965006,61962752,61961588,61960867,61956339,61955680,61955382,61952965,61950825,61946917,61942605	62065282,62063301,62052705,62035608,62033984,62031638,62030013,62029651,62011233,61995365,61992621,61987128,61985090,61984865,61984367,61983114,61972888,61968258,61966651,61965468,61962971,61961779,61961090,61956481,61955838,61955567,61953113,61950998,61947017,61946600	Gene ID= ENSG00000108510.9 TPM= 7.01 Transcript Type= protein_coding
chr17	62006968	62008341	62006968	62008341	+	transcript5846.chr17.nnic@NA	transcript5846.chr17.nnic	NA	62006968	62008341	Gene ID= novel_gene_chr17_5847 TPM= 12.84 Transcript Type= NA
chr17	62423867	62450093	62423867	62450093	+	ENST00000311506.9@METTL2A	ENST00000311506.9	protein_coding	62423867,62424219,62426299,62427788,62435232,62440617,62444837,62447701,62448575	62424012,62424310,62426654,62427837,62435292,62440756,62444943,62447766,62450093	Gene ID= ENSG00000087995.15 TPM= 4.67 Transcript Type= protein_coding
chr17	62423875	62448914	62423875	62448914	+	ENST00000333483.14@METTL2A	ENST00000333483.14	protein_coding	62423875,62426299,62427788,62435232,62440617,62444837,62447701,62448575	62424310,62426654,62427837,62435292,62440756,62444943,62447766,62448914	Gene ID= ENSG00000087995.15 TPM= 2.34 Transcript Type= retained_intron
chr17	62478786	62613664	62478786	62613664	+	transcript5860.chr17.nic@TLK2	transcript5860.chr17.nic	protein_coding	62478786,62481124,62520773,62522204,62523134,62524236,62536170,62552302,62553663,62560016,62565001,62573215,62576709,62578477,62580111,62586135,62596585,62600651,62602042,62606130,62608041,62612392	62479290,62481206,62520844,62522273,62523177,62524331,62536337,62552397,62553755,62560126,62565137,62573367,62576775,62578574,62580192,62586226,62596674,62600820,62602180,62606241,62608148,62613664	Gene ID= ENSG00000146872.17 TPM= 5.25 Transcript Type= NA
chr17	62478786	62613490	62478786	62613490	+	transcript5866.chr17.nnic@TLK2	transcript5866.chr17.nnic	protein_coding	62478786,62481124,62520773,62522204,62536170,62552302,62553663,62560016,62565001,62573215,62576709,62578477,62580111,62586135,62596585,62600651,62602042,62606130,62608041,62612392	62479290,62481206,62520844,62522273,62536337,62552397,62553755,62560126,62565137,62573367,62576775,62578574,62580192,62586226,62596674,62600820,62602180,62606241,62608148,62613490	Gene ID= ENSG00000146872.17 TPM= 2.34 Transcript Type= NA
chr17	62626437	62627590	62626437	62627590	-	ENST00000611274.1@AC080038.1	ENST00000611274.1	antisense_RNA	62626437	62627590	Gene ID= ENSG00000274565.1 TPM= 5.84 Transcript Type= antisense_RNA
chr17	62627401	62693597	62627401	62693597	+	ENST00000303375.9@MRC2	ENST00000303375.9	protein_coding	62627401,62664548,62666094,62666455,62666757,62667390,62671649,62671998,62674063,62675790,62676383,62677269,62678504,62679800,62680170,62680418,62680800,62681062,62681837,62682235,62688289,62688501,62688852,62689522,62689894,62690156,62690642,62690949,62692112,62692231	62627920,62664949,62666267,62666619,62666870,62667533,62671837,62672152,62674170,62675905,62676531,62677486,62678646,62679902,62680308,62680453,62680960,62681129,62681937,62682377,62688403,62688664,62688960,62689760,62690062,62690305,62690761,62691128,62692138,62693597	Gene ID= ENSG00000011028.13 TPM= 335.68 Transcript Type= protein_coding
chr17	62664547	62693553	62664547	62693553	+	transcript5876.chr17.nnic@MRC2	transcript5876.chr17.nnic	protein_coding	62664547,62664586,62666094,62666455,62666757,62667390,62671649,62671998,62674063,62675790,62676383,62677269,62678504,62679800,62680170,62680418,62680800,62681062,62681837,62682235,62688289,62688501,62688852,62689522,62689894,62690156,62690642,62690949,62692112,62692231	62664553,62664949,62666267,62666619,62666870,62667533,62671837,62672152,62674170,62675905,62676531,62677486,62678646,62679902,62680308,62680453,62680960,62681129,62681937,62682377,62688403,62688664,62688960,62689760,62690062,62690305,62690761,62691128,62692138,62693553	Gene ID= ENSG00000011028.13 TPM= 28.61 Transcript Type= NA
chr17	62668283	62669712	62668283	62669712	-	transcript5892.chr17.nnic@NA	transcript5892.chr17.nnic	NA	62668283	62669712	Gene ID= novel_gene_chr17_5893 TPM= 2.34 Transcript Type= NA
chr17	62689975	62691792	62689975	62691792	+	transcript5888.chr17.nnic@NA	transcript5888.chr17.nnic	NA	62689975	62691792	Gene ID= novel_gene_chr17_5889 TPM= 3.5 Transcript Type= NA
chr17	62966212	63239164	62966212	63239164	+	transcript5895.chr17.nnic@TANC2	transcript5895.chr17.nnic	protein_coding	62966212,63009537,63073943,63099175,63193991,63200771,63237814	62966749,63009626,63074014,63099357,63194139,63200957,63239164	Gene ID= ENSG00000170921.15 TPM= 5.84 Transcript Type= NA
chr17	62966212	63076441	62966212	63076441	+	transcript5898.chr17.nnic@TANC2	transcript5898.chr17.nnic	protein_coding	62966212,63009537,63073943	62966749,63009626,63076441	Gene ID= ENSG00000170921.15 TPM= 2.34 Transcript Type= NA
chr17	63010464	63015632	63010464	63015632	-	transcript5900.chr17.nnic@NA	transcript5900.chr17.nnic	NA	63010464	63015632	Gene ID= novel_gene_chr17_5901 TPM= 5.84 Transcript Type= NA
chr17	63391727	63394631	63391727	63394631	-	transcript5904.chr17.nnic@NA	transcript5904.chr17.nnic	NA	63391727	63394631	Gene ID= novel_gene_chr17_5905 TPM= 4.67 Transcript Type= NA
chr17	63432307	63446184	63432307	63446184	-	ENST00000392976.5@CYB561	ENST00000392976.5	protein_coding	63445898,63437346,63436054,63435688,63435086,63432307	63446184,63437560,63436152,63435791,63435243,63434594	Gene ID= ENSG00000008283.15 TPM= 12.06 Transcript Type= protein_coding
chr17	63432306	63446329	63432306	63446329	-	transcript5913.chr17.nnic@CYB561	transcript5913.chr17.nnic	protein_coding	63446245,63437346,63436054,63435688,63435159,63432306	63446329,63437560,63436152,63435791,63435243,63434515	Gene ID= ENSG00000008283.15 TPM= 13.23 Transcript Type= NA
chr17	63432304	63446378	63432304	63446378	-	ENST00000360793.7@CYB561	ENST00000360793.7	protein_coding	63446245,63437346,63436054,63435688,63435086,63432304	63446378,63437560,63436152,63435791,63435243,63434594	Gene ID= ENSG00000008283.15 TPM= 89.12 Transcript Type= protein_coding
chr17	63477071	63498380	63477071	63498380	+	ENST00000290866.9@ACE	ENST00000290866.9	protein_coding	63477071,63477931,63479007,63479769,63480337,63481091,63481566,63482466,63483029,63483460,63483849,63484330,63485236,63486557,63486986,63488648,63488941,63490954,63491209,63493436,63493922,63494372,63496394,63496798,63497137	63477343,63478098,63479100,63479912,63480528,63481188,63481738,63482689,63483173,63483558,63483971,63484541,63485372,63486715,63487073,63488791,63489132,63491051,63491381,63493659,63494066,63494470,63496516,63496985,63498380	Gene ID= ENSG00000159640.15 TPM= 51.96 Transcript Type= protein_coding
chr17	63477061	63498380	63477061	63498380	+	ENST00000428043.5@ACE	ENST00000428043.5	protein_coding	63477061,63477931,63479007,63479769,63480337,63481091,63481566,63482466,63483029,63483460,63483849,63484330,63485236,63486557,63486986,63488648,63488941,63490954,63491209,63493436,63493922,63494372,63496394,63496798	63477343,63478098,63479100,63479912,63480528,63481188,63481738,63482689,63483173,63483558,63483971,63484541,63485372,63486715,63487073,63488791,63489132,63491051,63491381,63493659,63494066,63494470,63496516,63498380	Gene ID= ENSG00000159640.15 TPM= 9.92 Transcript Type= protein_coding
chr17	63550482	63594266	63550482	63594266	+	ENST00000431926.5@DCAF7	ENST00000431926.5	protein_coding	63550482,63578470,63579337,63579825,63583502,63585211,63589000,63594203	63550815,63578628,63579448,63579943,63583711,63585328,63589237,63594266	Gene ID= ENSG00000136485.14 TPM= 12.26 Transcript Type= nonsense_mediated_decay
chr17	63550461	63594266	63550461	63594266	+	ENST00000614556.4@DCAF7	ENST00000614556.4	protein_coding	63550461,63578470,63579337,63579825,63583502,63585211,63589000	63550815,63578628,63579448,63579943,63583711,63585328,63594266	Gene ID= ENSG00000136485.14 TPM= 147.7 Transcript Type= protein_coding
chr17	63600882	63608364	63600882	63608364	+	ENST00000581120.1@TACO1	ENST00000581120.1	protein_coding	63600882,63604534,63606313,63607802	63601363,63604640,63607464,63608364	Gene ID= ENSG00000136463.7 TPM= 1.17 Transcript Type= retained_intron
chr17	63600872	63608365	63600872	63608365	+	ENST00000258975.6@TACO1	ENST00000258975.6	protein_coding	63600872,63604534,63606313,63607287,63607802	63601363,63604640,63606440,63607464,63608365	Gene ID= ENSG00000136463.7 TPM= 11.68 Transcript Type= protein_coding
chr17	63622440	63695105	63622440	63695105	+	ENST00000361733.7@MAP3K3	ENST00000361733.7	protein_coding	63622440,63632681,63646034,63652557,63657794,63666940,63681766,63685517,63688527,63688789,63689544,63690264,63691102,63691733,63692242,63693549	63622763,63632802,63646074,63652656,63657907,63667060,63681899,63685590,63688594,63688881,63689735,63690412,63691233,63691862,63692419,63695105	Gene ID= ENSG00000198909.7 TPM= 51.96 Transcript Type= protein_coding
chr17	63622442	63696303	63622442	63696303	+	ENST00000361357.7@MAP3K3	ENST00000361357.7	protein_coding	63622442,63632681,63634709,63646034,63652557,63657794,63666940,63681766,63685517,63688527,63688789,63689544,63690264,63691102,63691733,63692242,63693549	63622763,63632802,63634801,63646074,63652656,63657907,63667060,63681899,63685590,63688594,63688881,63689735,63690412,63691233,63691862,63692419,63696303	Gene ID= ENSG00000198909.7 TPM= 26.27 Transcript Type= protein_coding
chr17	63697816	63700695	63697816	63700695	-	transcript5965.chr17.nic@LIMD2	transcript5965.chr17.nic	protein_coding	63699257,63699028,63698799,63697816	63700695,63699069,63698938,63698711	Gene ID= ENSG00000136490.8 TPM= 16.35 Transcript Type= NA
chr17	63697816	63700108	63697816	63700108	-	ENST00000578067.5@LIMD2	ENST00000578067.5	protein_coding	63699257,63698799,63697816	63700108,63699069,63698711	Gene ID= ENSG00000136490.8 TPM= 5.84 Transcript Type= retained_intron
chr17	63700052	63702671	63700052	63702671	+	transcript5973.chr17.nnic@NA	transcript5973.chr17.nnic	NA	63700052	63702671	Gene ID= novel_gene_chr17_5974 TPM= 2.34 Transcript Type= NA
chr17	63702835	63741874	63702835	63741874	-	ENST00000375840.9@STRADA	ENST00000375840.9	protein_coding	63741741,63728334,63726638,63714006,63713406,63710728,63710491,63707247,63706635,63704341,63704005,63702835	63741874,63728413,63726695,63714108,63713527,63710836,63710614,63707418,63706739,63704582,63704047,63703751	Gene ID= ENSG00000266173.6 TPM= 7.3 Transcript Type= protein_coding
chr17	63702819	63741860	63702819	63741860	-	ENST00000638708.1@STRADA	ENST00000638708.1	protein_coding	63741741,63728334,63714006,63713406,63710728,63710491,63707247,63706635,63704341,63704005,63702819	63741860,63728413,63714108,63713527,63710836,63710614,63707418,63706739,63704582,63704047,63703751	Gene ID= ENSG00000266173.6 TPM= 6.13 Transcript Type= protein_coding
chr17	63702819	63741861	63702819	63741861	-	ENST00000639835.1@STRADA	ENST00000639835.1	protein_coding	63741741,63728358,63714006,63713406,63710728,63710491,63707247,63706635,63704341,63704005,63702819	63741861,63728413,63714108,63713527,63710836,63710614,63707418,63706739,63704582,63704047,63703751	Gene ID= ENSG00000266173.6 TPM= 4.96 Transcript Type= protein_coding
chr17	63702842	63741986	63702842	63741986	-	ENST00000392950.9@STRADA	ENST00000392950.9	protein_coding	63741741,63728358,63714006,63713406,63710728,63710491,63707247,63706635,63702842	63741986,63728413,63714108,63713527,63710836,63710614,63707418,63706739,63704582	Gene ID= ENSG00000266173.6 TPM= 3.79 Transcript Type= protein_coding
chr17	63745250	63773775	63745250	63773775	-	ENST00000225726.9@CCDC47	ENST00000225726.9	protein_coding	63773412,63765912,63764740,63764016,63761230,63760914,63756469,63756240,63754433,63752741,63752320,63751940,63745250	63773775,63766194,63764847,63764190,63761351,63760979,63756570,63756350,63754518,63752799,63752429,63752107,63746961	Gene ID= ENSG00000108588.13 TPM= 116.76 Transcript Type= protein_coding
chr17	63773863	63819317	63773863	63819317	+	ENST00000578681.5@DDX42	ENST00000578681.5	protein_coding	63773863,63775108,63787034,63792412,63798038,63799589,63800468,63805071,63806535,63807724,63808820,63809560,63810513,63811076,63811932,63813228,63815563,63816868,63817694	63774376,63775178,63787270,63792562,63798099,63799625,63800617,63805175,63806654,63807900,63808948,63809659,63810560,63811173,63812208,63813454,63815673,63816966,63819317	Gene ID= ENSG00000198231.12 TPM= 9.92 Transcript Type= protein_coding
chr17	63774205	63819317	63774205	63819317	+	transcript6000.chr17.nnic@DDX42	transcript6000.chr17.nnic	protein_coding	63774205,63774249,63787034,63792412,63798038,63799589,63800468,63805071,63806535,63807724,63808820,63809560,63810513,63811076,63811932,63813228,63815563,63816868,63817694	63774224,63774376,63787270,63792562,63798099,63799625,63800617,63805175,63806654,63807900,63808948,63809659,63810560,63811173,63812208,63813454,63815673,63816966,63819317	Gene ID= ENSG00000198231.12 TPM= 9.92 Transcript Type= NA
chr17	63817073	63819316	63817073	63819316	+	ENST00000581767.1@DDX42	ENST00000581767.1	protein_coding	63817073	63819316	Gene ID= ENSG00000198231.12 TPM= 4.67 Transcript Type= retained_intron
chr17	63819433	63827064	63819433	63827064	-	transcript5997.chr17.nic@FTSJ3	transcript5997.chr17.nic	protein_coding	63826836,63826567,63826258,63826056,63825536,63825242,63825048,63824825,63824637,63824331,63824084,63823817,63821984,63821723,63821354,63821030,63820839,63820255,63820079,63819433	63827064,63826672,63826304,63826135,63825635,63825436,63825163,63824929,63824737,63824411,63824239,63823952,63822168,63821843,63821643,63821115,63820938,63820438,63820173,63819994	Gene ID= ENSG00000108592.16 TPM= 44.37 Transcript Type= NA
chr17	63827183	63832019	63827183	63832019	+	ENST00000310144.10@PSMC5	ENST00000310144.10	protein_coding	63827183,63828138,63829494,63829852,63830133,63830271,63830809,63831036,63831327,63831506,63831724,63831916	63827514,63828209,63829563,63829949,63830189,63830501,63830935,63831226,63831425,63831616,63831810,63832019	Gene ID= ENSG00000087191.12 TPM= 146.51 Transcript Type= protein_coding
chr17	63827490	63832018	63827490	63832018	+	ENST00000578570.5@PSMC5	ENST00000578570.5	protein_coding	63827490,63828138,63829494,63829852,63830133,63830271,63830809,63831036,63831327,63831506,63831724,63831916	63827923,63828209,63829563,63829949,63830189,63830501,63830935,63831226,63831425,63831616,63831810,63832018	Gene ID= ENSG00000087191.12 TPM= 5.14 Transcript Type= retained_intron
chr17	63827460	63832019	63827460	63832019	+	ENST00000579147.5@PSMC5	ENST00000579147.5	protein_coding	63827460,63828138,63829852,63830133,63830271,63830809,63831036,63831327,63831506,63831724,63831916	63827514,63829563,63829949,63830189,63830501,63830935,63831226,63831425,63831616,63831810,63832019	Gene ID= ENSG00000087191.12 TPM= 2.51 Transcript Type= retained_intron
chr17	63827460	63832019	63827460	63832019	+	ENST00000580864.5@PSMC5	ENST00000580864.5	protein_coding	63827460,63827674,63828138,63829494,63829852,63830133,63830271,63830809,63831036,63831327,63831506,63831724,63831916	63827514,63827923,63828209,63829563,63829949,63830189,63830501,63830935,63831226,63831425,63831616,63831810,63832019	Gene ID= ENSG00000087191.12 TPM= 6.98 Transcript Type= protein_coding
chr17	63827684	63832026	63827684	63832026	+	ENST00000375812.8@PSMC5	ENST00000375812.8	protein_coding	63827684,63828138,63829494,63829852,63830133,63830271,63830809,63831036,63831327,63831506,63831724,63831916	63827923,63828209,63829563,63829949,63830189,63830501,63830935,63831226,63831425,63831616,63831810,63832026	Gene ID= ENSG00000087191.12 TPM= 6.98 Transcript Type= protein_coding
chr17	63832084	63842940	63832084	63842940	-	ENST00000448276.6@SMARCD2	ENST00000448276.6	protein_coding	63842459,63837441,63837195,63836922,63835412,63834705,63834474,63834167,63833909,63833587,63833298,63833069,63832084	63842940,63837625,63837237,63837044,63835567,63834800,63834575,63834328,63834006,63833722,63833420,63833170,63832991	Gene ID= ENSG00000108604.15 TPM= 136.61 Transcript Type= protein_coding
chr17	63928740	63932354	63928740	63932354	-	ENST00000006750.7@CD79B	ENST00000006750.7	protein_coding	63932195,63931335,63930074,63929770,63929434,63928740	63932354,63931385,63930385,63929888,63929475,63929324	Gene ID= ENSG00000007312.12 TPM= 3.5 Transcript Type= protein_coding
chr17	63928768	63930514	63928768	63930514	-	ENST00000559358.1@CD79B	ENST00000559358.1	protein_coding	63930074,63929770,63929434,63928768	63930514,63929888,63929475,63929324	Gene ID= ENSG00000007312.12 TPM= 1.17 Transcript Type= retained_intron
chr17	64000317	64002404	64000317	64002404	-	transcript6040.chr17.nnic@NA	transcript6040.chr17.nnic	NA	64000317	64002404	Gene ID= novel_gene_chr17_6041 TPM= 3.5 Transcript Type= NA
chr17	64002594	64005000	64002594	64005000	-	transcript6044.chr17.nnic@NA	transcript6044.chr17.nnic	NA	64002594	64005000	Gene ID= novel_gene_chr17_6045 TPM= 2.34 Transcript Type= NA
chr17	64002596	64020634	64002596	64020634	-	ENST00000418105.5@ICAM2	ENST00000418105.5	protein_coding	64020406,64006631,64005107,64003644,64002596	64020634,64006735,64005373,64003964,64002925	Gene ID= ENSG00000108622.10 TPM= 4.67 Transcript Type= protein_coding
chr17	64002595	64006932	64002595	64006932	-	ENST00000449662.6@ICAM2	ENST00000449662.6	protein_coding	64006631,64005107,64003644,64002595	64006932,64005373,64003964,64002925	Gene ID= ENSG00000108622.10 TPM= 29.19 Transcript Type= protein_coding
chr17	64002596	64020602	64002596	64020602	-	ENST00000579788.5@ICAM2	ENST00000579788.5	protein_coding	64020523,64006631,64005107,64003644,64002596	64020602,64006735,64005373,64003964,64002925	Gene ID= ENSG00000108622.10 TPM= 75.89 Transcript Type= protein_coding
chr17	64039142	64130125	64039142	64130125	-	ENST00000433197.3@ERN1	ENST00000433197.3	protein_coding	64129976,64098121,64080775,64079662,64075175,64071981,64068190,64066671,64065209,64063986,64060469,64057802,64055675,64054738,64054250,64053272,64052780,64049055,64047858,64045359,64044860,64039142	64130125,64098241,64080808,64079734,64075247,64072103,64068291,64066932,64065287,64064151,64060587,64057993,64055948,64054828,64054439,64053371,64052979,64049202,64047985,64045482,64044927,64044200	Gene ID= ENSG00000178607.15 TPM= 9.34 Transcript Type= protein_coding
chr17	64128805	64130160	64128805	64130160	-	transcript6052.chr17.nnic@NA	transcript6052.chr17.nnic	NA	64128805	64130160	Gene ID= novel_gene_chr17_6053 TPM= 2.34 Transcript Type= NA
chr17	64145970	64146307	64145970	64146307	+	transcript6056.chr17.nnic@NA	transcript6056.chr17.nnic	NA	64145970	64146307	Gene ID= novel_gene_chr17_6057 TPM= 11.68 Transcript Type= NA
chr17	64145970	64146309	64145970	64146309	+	ENST00000580828.1@SNHG25	ENST00000580828.1	lincRNA	64145970,64146230	64145995,64146309	Gene ID= ENSG00000266402.3 TPM= 29.19 Transcript Type= lincRNA
chr17	64145970	64146476	64145970	64146476	+	ENST00000582965.1@SNHG25	ENST00000582965.1	lincRNA	64145970,64146230	64146000,64146476	Gene ID= ENSG00000266402.3 TPM= 31.53 Transcript Type= lincRNA
chr17	64147674	64263299	64147674	64263299	-	transcript6062.chr17.nnic@TEX2	transcript6062.chr17.nnic	protein_coding	64263168,64212574,64194895,64193559,64188168,64177325,64171100,64160853,64154842,64152945,64150841,64147674	64263299,64214242,64195095,64193889,64188415,64177471,64171199,64160933,64154967,64153154,64150961,64149091	Gene ID= ENSG00000136478.7 TPM= 7.39 Transcript Type= NA
chr17	64147674	64156885	64147674	64156885	-	transcript6066.chr17.nic@TEX2	transcript6066.chr17.nic	protein_coding	64154842,64152945,64150841,64147674	64156885,64153154,64150961,64149091	Gene ID= ENSG00000136478.7 TPM= 5.64 Transcript Type= NA
chr17	64147687	64263301	64147687	64263301	-	ENST00000584379.5@TEX2	ENST00000584379.5	protein_coding	64263168,64212574,64194895,64193559,64188168,64177325,64171100,64160801,64154842,64152945,64150841,64147687	64263301,64214242,64195095,64193889,64188415,64177471,64171199,64160933,64154967,64153154,64150961,64149091	Gene ID= ENSG00000136478.7 TPM= 28.99 Transcript Type= protein_coding
chr17	64319415	64390878	64319415	64390878	-	ENST00000563924.5@PECAM1	ENST00000563924.5	protein_coding	64390602,64390489,64377824,64375051,64369750,64363149,64360140,64356111,64354933,64353491,64352390,64350380,64348260,64341634,64329700,64319415	64390878,64390515,64378117,64375356,64370025,64363397,64360415,64356398,64355040,64353518,64352463,64350433,64348322,64341690,64329722,64323845	Gene ID= ENSG00000261371.5 TPM= 70.06 Transcript Type= protein_coding
chr17	64363384	64367019	64363384	64367019	+	transcript6084.chr17.nnic@NA	transcript6084.chr17.nnic	NA	64363384	64367019	Gene ID= novel_gene_chr17_6085 TPM= 7.01 Transcript Type= NA
chr17	64411612	64413794	64411612	64413794	+	transcript6082.chr17.nnic@NA	transcript6082.chr17.nnic	NA	64411612	64413794	Gene ID= novel_gene_chr17_6083 TPM= 10.51 Transcript Type= NA
chr17	64449115	64468642	64449115	64468642	+	ENST00000619286.4@MILR1	ENST00000619286.4	protein_coding	64449115,64449314,64452597,64457400,64460822,64465452,64466442,64466594,64467565,64468310	64449223,64449355,64452866,64457684,64460932,64465541,64466498,64466662,64467645,64468642	Gene ID= ENSG00000271605.5 TPM= 4.67 Transcript Type= protein_coding
chr17	64477785	64497054	64477785	64497054	-	transcript6098.chr17.nic@POLG2	transcript6098.chr17.nic	protein_coding	64496532,64492895,64492667,64490796,64485728,64482919,64480289,64477785	64497054,64493021,64492772,64490969,64485868,64482999,64480389,64477988	Gene ID= ENSG00000256525.6 TPM= 2.92 Transcript Type= NA
chr17	64477785	64497036	64477785	64497036	-	ENST00000539111.6@POLG2	ENST00000539111.6	protein_coding	64496407,64492895,64492667,64490796,64485728,64482919,64480289,64477785	64497036,64493021,64492772,64490969,64485868,64482999,64480389,64477988	Gene ID= ENSG00000256525.6 TPM= 6.42 Transcript Type= protein_coding
chr17	64499616	64506521	64499616	64506521	-	ENST00000225792.9@DDX5	ENST00000225792.9	protein_coding	64506076,64504677,64504222,64503983,64503803,64503430,64503188,64502926,64502439,64502162,64502010,64500549,64499616	64506521,64504842,64504318,64504116,64503868,64503571,64503348,64503098,64502549,64502223,64502069,64500773,64500326	Gene ID= ENSG00000108654.13 TPM= 655.43 Transcript Type= protein_coding
chr17	64499624	64506290	64499624	64506290	-	transcript6139.chr17.nic@DDX5	transcript6139.chr17.nic	protein_coding	64506076,64504677,64504222,64503983,64503803,64503430,64503188,64502926,64502439,64502162,64499624	64506290,64504842,64504318,64504116,64503868,64503571,64503348,64503098,64502549,64502223,64502069	Gene ID= ENSG00000108654.13 TPM= 57.71 Transcript Type= NA
chr17	64499616	64506289	64499616	64506289	-	ENST00000581230.5@DDX5	ENST00000581230.5	protein_coding	64506076,64504677,64504222,64503983,64503803,64503430,64503188,64502926,64502439,64502162,64500549,64499616	64506289,64504842,64504318,64504116,64503868,64503571,64503348,64503098,64502549,64502223,64502069,64500326	Gene ID= ENSG00000108654.13 TPM= 84.48 Transcript Type= retained_intron
chr17	64506588	64537942	64506588	64537942	+	ENST00000556440.6@CEP95	ENST00000556440.6	protein_coding	64506588,64508592,64510173,64514248,64516723,64519321,64521402,64522702,64525770,64526071,64527111,64529288,64530926,64531890,64532839,64533117,64534585,64536602,64537041,64537603	64507116,64508720,64510280,64514358,64516828,64519436,64521527,64522895,64525882,64526200,64527264,64529427,64531018,64532022,64533008,64533191,64534737,64536748,64537112,64537942	Gene ID= ENSG00000258890.6 TPM= 4.67 Transcript Type= protein_coding
chr17	64506906	64537946	64506906	64537946	+	transcript6109.chr17.nic@CEP95	transcript6109.chr17.nic	protein_coding	64506906,64508592,64510173,64514248,64519321,64521402,64522702,64525770,64526071,64527111,64529288,64530926,64531890,64532839,64533117,64534585,64536602,64537041,64537603	64507116,64508720,64510280,64514358,64519436,64521527,64522895,64525882,64526200,64527264,64529427,64531018,64532022,64533008,64533191,64534737,64536748,64537112,64537946	Gene ID= ENSG00000258890.6 TPM= 2.34 Transcript Type= NA
chr17	64545365	64662364	64545365	64662364	-	transcript6166.chr17.nic@SMURF2	transcript6166.chr17.nic	protein_coding	64661829,64598382,64593440,64591084,64586086,64583461,64580789,64578492,64571798,64562771,64561500,64557608,64555820,64554856,64551584,64547600,64546263,64545365	64662364,64598490,64593573,64591149,64586170,64583544,64580991,64578576,64571956,64562966,64561603,64557722,64555998,64554993,64551704,64547801,64546338,64545947	Gene ID= ENSG00000108854.15 TPM= 5.84 Transcript Type= NA
chr17	64776325	64777826	64776325	64777826	+	transcript6220.chr17.nnic@NA	transcript6220.chr17.nnic	NA	64776325	64777826	Gene ID= novel_gene_chr17_6221 TPM= 32.69 Transcript Type= NA
chr17	64784870	64837200	64784870	64837200	-	transcript6185.chr17.nic@PLEKHM1P1	transcript6185.chr17.nic	transcribed_unprocessed_pseudogene	64837056,64829161,64824625,64822254,64821767,64804830,64800000,64797264,64792349,64787248,64786567,64784870	64837200,64829249,64824872,64822393,64822052,64805100,64800917,64797409,64792542,64787311,64786724,64785367	Gene ID= ENSG00000214176.9 TPM= 21.8 Transcript Type= NA
chr17	64784870	64837200	64784870	64837200	-	transcript6186.chr17.nnic@PLEKHM1P1	transcript6186.chr17.nnic	transcribed_unprocessed_pseudogene	64837056,64829161,64824826,64822254,64821767,64804830,64800000,64797264,64792349,64787248,64786567,64784870	64837200,64829249,64824872,64822393,64822052,64805100,64800917,64797409,64792542,64787311,64786724,64785367	Gene ID= ENSG00000214176.9 TPM= 3.12 Transcript Type= NA
chr17	64778139	64781355	64778139	64781355	-	transcript6197.chr17.nnic@PLEKHM1P1	transcript6197.chr17.nnic	transcribed_unprocessed_pseudogene	64781240,64780981,64780343,64779415,64779263,64778139	64781355,64781039,64780464,64780205,64779334,64779079	Gene ID= ENSG00000214176.9 TPM= 16.35 Transcript Type= NA
chr17	64782719	64837154	64782719	64837154	-	ENST00000582986.5@PLEKHM1P1	ENST00000582986.5	transcribed_unprocessed_pseudogene	64837056,64829161,64822254,64821767,64804830,64800000,64797264,64792349,64787248,64786567,64782719	64837154,64829249,64822393,64822052,64805100,64800917,64797409,64792542,64787311,64786724,64785367	Gene ID= ENSG00000214176.9 TPM= 5.45 Transcript Type= processed_transcript
chr17	64968038	64975580	64968038	64975580	-	transcript6200.chr17.nnic@AMZ2P1	transcript6200.chr17.nnic	transcribed_unprocessed_pseudogene	64975560,64974555,64973242,64972754,64972534,64968038	64975580,64974641,64973517,64972927,64972662,64968381	Gene ID= ENSG00000214174.8 TPM= 3.5 Transcript Type= NA
chr17	64966550	64975568	64966550	64975568	-	ENST00000430983.5@AMZ2P1	ENST00000430983.5	transcribed_unprocessed_pseudogene	64974555,64973242,64972754,64972534,64966550	64975568,64973517,64972927,64972662,64968381	Gene ID= ENSG00000214174.8 TPM= 1.17 Transcript Type= processed_transcript
chr17	65010715	65056839	65010715	65056839	-	ENST00000439174.6@GNA13	ENST00000439174.6	protein_coding	65056311,65053502,65018253,65010715	65056839,65053728,65018303,65014829	Gene ID= ENSG00000120063.9 TPM= 57.21 Transcript Type= protein_coding
chr17	65100812	65113130	65100812	65113130	+	ENST00000638125.1@RGS9	ENST00000638125.1	protein_coding	65100812,65101207,65110716	65101042,65101296,65113130	Gene ID= ENSG00000108370.16 TPM= 1.17 Transcript Type= processed_transcript
chr17	65137454	65227678	65137454	65227678	+	ENST00000584234.5@RGS9	ENST00000584234.5	protein_coding	65137454,65153422,65158295,65160233,65160536,65160851,65163013,65168200,65177732,65189286,65190175,65193543,65197126,65201993,65204163,65207922,65210488,65225002,65227275	65137597,65153518,65158345,65160339,65160587,65160909,65163089,65168281,65177803,65189315,65190236,65193656,65197241,65202080,65204301,65208011,65210605,65225486,65227678	Gene ID= ENSG00000108370.16 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr17	65528563	65561080	65528563	65561080	-	transcript6228.chr17.nic@AXIN2	transcript6228.chr17.nic	protein_coding	65560825,65557806,65549520,65541455,65538203,65537324,65536869,65536320,65535626,65533912,65528563	65561080,65558736,65549660,65541557,65538343,65537835,65537063,65536553,65535721,65534079,65530102	Gene ID= ENSG00000168646.12 TPM= 10.02 Transcript Type= NA
chr17	65528563	65560365	65528563	65560365	-	transcript6229.chr17.nic@AXIN2	transcript6229.chr17.nic	protein_coding	65559954,65557806,65549520,65541455,65538203,65537324,65536320,65535626,65533912,65528563	65560365,65558736,65549660,65541557,65538343,65537835,65536553,65535721,65534079,65530102	Gene ID= ENSG00000168646.12 TPM= 8.08 Transcript Type= NA
chr17	65528563	65561162	65528563	65561162	-	transcript6230.chr17.nic@AXIN2	transcript6230.chr17.nic	protein_coding	65560825,65557806,65549520,65541455,65538203,65537324,65536320,65535626,65533912,65528563	65561162,65558736,65549660,65541557,65538343,65537835,65536553,65535721,65534079,65530102	Gene ID= ENSG00000168646.12 TPM= 5.74 Transcript Type= NA
chr17	65528567	65561647	65528567	65561647	-	ENST00000618960.4@AXIN2	ENST00000618960.4	protein_coding	65561450,65557806,65549520,65541455,65538203,65537324,65536320,65535626,65533912,65528567	65561647,65558736,65549660,65541557,65538343,65537835,65536553,65535721,65534079,65530102	Gene ID= ENSG00000168646.12 TPM= 5.35 Transcript Type= protein_coding
chr17	65635541	66191921	65635541	66191921	-	transcript6235.chr17.nnic@CEP112	transcript6235.chr17.nnic	protein_coding	66191659,66183194,66176830,66175044,66132670,66129746,66096585,66096251,66069915,66066778,66062963,66053736,66043096,66029869,66029123,66028313,66027501,66005690,65961463,65927582,65902152,65851804,65750662,65743068,65689129,65640964,65637124,65635541	66191921,66183307,66177020,66175216,66132763,66129823,66096632,66096328,66070001,66066877,66063081,66053879,66043250,66030023,66029252,66028405,66027560,66005769,65961598,65927689,65902334,65852034,65750724,65743217,65689218,65641065,65637188,65635974	Gene ID= ENSG00000154240.16 TPM= 2.34 Transcript Type= NA
chr17	65635541	66191921	65635541	66191921	-	transcript6238.chr17.nnic@CEP112	transcript6238.chr17.nnic	protein_coding	66191659,66183194,66176830,66175044,66139486,66132670,66129746,66096585,66096251,66069915,66066778,66062963,66053736,66029869,66029123,66028313,66027501,66005690,65961463,65927582,65902152,65851804,65750662,65743068,65689129,65640964,65637124,65635541	66191921,66183307,66177020,66175216,66139600,66132763,66129823,66096632,66096328,66070001,66066877,66063081,66053879,66030023,66029252,66028405,66027560,66005769,65961598,65927689,65902334,65852034,65750724,65743217,65689218,65641065,65637188,65635974	Gene ID= ENSG00000154240.16 TPM= 2.34 Transcript Type= NA
chr17	65635540	66191921	65635540	66191921	-	transcript6241.chr17.nnic@CEP112	transcript6241.chr17.nnic	protein_coding	66191659,66183194,66176830,66175044,66132670,66129746,66096585,66096251,66069915,66066778,66062963,66053736,66029869,66029123,66028313,66027501,66005690,65961463,65927582,65902152,65851804,65750662,65743068,65689129,65640964,65637107,65635540	66191921,66183307,66177020,66175216,66132763,66129823,66096632,66096328,66070001,66066877,66063081,66053879,66030023,66029252,66028405,66027560,66005769,65961598,65927689,65902334,65852034,65750724,65743217,65689218,65641065,65637188,65635974	Gene ID= ENSG00000154240.16 TPM= 3.5 Transcript Type= NA
chr17	65635541	66191869	65635541	66191869	-	ENST00000392769.6@CEP112	ENST00000392769.6	protein_coding	66191659,66183194,66176830,66175044,66132670,66129746,66096585,66096251,66069915,66066778,66062963,66053736,66029869,66029123,66028313,66027501,66005690,65961463,65927582,65902152,65851804,65750662,65743068,65689129,65640964,65637124,65635541	66191869,66183307,66177020,66175216,66132763,66129823,66096632,66096328,66070001,66066877,66063081,66053879,66030023,66029252,66028405,66027560,66005769,65961598,65927689,65902334,65852034,65750724,65743217,65689218,65641065,65637188,65635974	Gene ID= ENSG00000154240.16 TPM= 7.01 Transcript Type= protein_coding
chr17	65635538	66192079	65635538	66192079	-	ENST00000535342.6@CEP112	ENST00000535342.6	protein_coding	66191997,66183194,66176830,66175044,66132670,66129746,66096585,66096251,66069915,66066778,66062963,66053736,66029869,66029123,66028313,66027501,66005690,65961463,65927582,65902152,65851804,65750662,65743068,65689129,65640964,65637124,65635538	66192079,66183307,66177020,66175216,66132763,66129823,66096632,66096328,66070001,66066877,66063081,66053879,66030023,66029252,66028405,66027560,66005769,65961598,65927689,65902334,65852034,65750724,65743217,65689218,65641065,65637188,65635974	Gene ID= ENSG00000154240.16 TPM= 2.34 Transcript Type= protein_coding
chr17	66212033	66229417	66212033	66229417	-	ENST00000205948.10@APOH	ENST00000205948.10	protein_coding	66229316,66228020,66226028,66223698,66220554,66216788,66214453,66212033	66229417,66228196,66226124,66223774,66220742,66216967,66214650,66212188	Gene ID= ENSG00000091583.10 TPM= 21.02 Transcript Type= protein_coding
chr17	67337916	67366590	67337916	67366590	-	transcript6269.chr17.nnic@PSMD12	transcript6269.chr17.nnic	protein_coding	67366412,67357519,67357303,67350229,67348550,67347336,67347116,67345745,67344606,67342186,67339398,67337916	67366590,67357578,67357431,67350336,67348654,67347485,67347250,67345857,67344780,67342263,67341052,67338624	Gene ID= ENSG00000197170.9 TPM= 5.84 Transcript Type= NA
chr17	67337917	67366590	67337917	67366590	-	transcript6270.chr17.nnic@PSMD12	transcript6270.chr17.nnic	protein_coding	67366412,67357519,67357303,67350229,67348550,67347336,67347116,67345745,67344606,67342186,67339437,67337917	67366590,67357578,67357431,67350336,67348654,67347485,67347250,67345857,67344780,67342263,67341052,67338626	Gene ID= ENSG00000197170.9 TPM= 3.5 Transcript Type= NA
chr17	67337916	67366627	67337916	67366627	-	ENST00000356126.7@PSMD12	ENST00000356126.7	protein_coding	67366412,67357519,67357303,67350229,67348550,67347336,67347116,67345745,67344606,67342186,67337916	67366627,67357578,67357431,67350336,67348654,67347485,67347250,67345857,67344780,67342263,67341052	Gene ID= ENSG00000197170.9 TPM= 10.51 Transcript Type= protein_coding
chr17	67377259	67693527	67377259	67693527	+	transcript6285.chr17.nic@PITPNC1	transcript6285.chr17.nic	protein_coding	67377259,67532802,67552257,67578186,67632143,67669508,67675479,67687066,67692572	67378202,67532950,67552345,67578257,67632238,67669663,67675542,67687184,67693527	Gene ID= ENSG00000154217.14 TPM= 8.17 Transcript Type= NA
chr17	67410839	67414109	67410839	67414109	+	transcript6292.chr17.nnic@NA	transcript6292.chr17.nnic	NA	67410839	67414109	Gene ID= novel_gene_chr17_6293 TPM= 3.5 Transcript Type= NA
chr17	67825510	67903825	67825510	67903825	+	transcript6298.chr17.nic@BPTF	transcript6298.chr17.nic	protein_coding	67825510,67853940,67866464,67874817,67875556,67891844,67893370,67893680,67894034,67903789	67826337,67854762,67866687,67875020,67875744,67892034,67893678,67893725,67894165,67903825	Gene ID= ENSG00000171634.16 TPM= 2.34 Transcript Type= NA
chr17	67886488	67887811	67886488	67887811	-	transcript6305.chr17.nnic@NA	transcript6305.chr17.nnic	NA	67886488	67887811	Gene ID= novel_gene_chr17_6306 TPM= 2.34 Transcript Type= NA
chr17	67991098	67993596	67991098	67993596	-	transcript6310.chr17.nnic@NA	transcript6310.chr17.nnic	NA	67991098	67993596	Gene ID= novel_gene_chr17_6311 TPM= 2.34 Transcript Type= NA
chr17	67991101	67996431	67991101	67996431	-	ENST00000580729.2@C17orf58	ENST00000580729.2	protein_coding	67996123,67993424,67993044,67991101	67996431,67993984,67993235,67992103	Gene ID= ENSG00000186665.9 TPM= 17.51 Transcript Type= protein_coding
chr17	67991101	67993623	67991101	67993623	-	transcript6308.chr17.nic@C17orf58	transcript6308.chr17.nic	protein_coding	67993044,67991101	67993623,67992103	Gene ID= ENSG00000186665.9 TPM= 3.5 Transcript Type= NA
chr17	67991102	67993552	67991102	67993552	-	ENST00000536693.1@C17orf58	ENST00000536693.1	protein_coding	67992901,67991102	67993552,67992103	Gene ID= ENSG00000186665.9 TPM= 4.67 Transcript Type= retained_intron
chr17	68035519	68046842	68035519	68046842	+	ENST00000330459.7@KPNA2	ENST00000330459.7	protein_coding	68035519,68037110,68037358,68040678,68042085,68042905,68043100,68043838,68044321,68045772,68046504	68035840,68037207,68037495,68040766,68042353,68042999,68043363,68044071,68044503,68045921,68046842	Gene ID= ENSG00000182481.8 TPM= 30.36 Transcript Type= protein_coding
chr17	68101704	68125908	68101704	68125908	+	transcript6319.chr17.nnic@LINC00674	transcript6319.chr17.nnic	transcribed_unprocessed_pseudogene	68101704,68102943,68106422,68114422,68125390,68125585	68101959,68103058,68106553,68114525,68125480,68125908	Gene ID= ENSG00000237854.3 TPM= 5.06 Transcript Type= NA
chr17	68101647	68129586	68101647	68129586	+	transcript6323.chr17.nnic@LINC00674	transcript6323.chr17.nnic	transcribed_unprocessed_pseudogene	68101647,68102943,68114422,68125390,68125585	68101959,68103058,68114525,68125480,68129586	Gene ID= ENSG00000237854.3 TPM= 5.06 Transcript Type= NA
chr17	68101558	68129586	68101558	68129586	+	transcript6326.chr17.nnic@LINC00674	transcript6326.chr17.nnic	transcribed_unprocessed_pseudogene	68101558,68114422,68125390,68125585	68101959,68114525,68125480,68129586	Gene ID= ENSG00000237854.3 TPM= 6.22 Transcript Type= NA
chr17	68101647	68115518	68101647	68115518	+	transcript6327.chr17.nnic@LINC00674	transcript6327.chr17.nnic	transcribed_unprocessed_pseudogene	68101647,68102943,68114422,68115061	68101959,68103058,68114525,68115518	Gene ID= ENSG00000237854.3 TPM= 2.34 Transcript Type= NA
chr17	68126666	68129586	68126666	68129586	+	ENST00000620266.1@AC005332.9	ENST00000620266.1	lincRNA	68126666	68129586	Gene ID= ENSG00000278730.1 TPM= 9.34 Transcript Type= lincRNA
chr17	68131293	68132783	68131293	68132783	-	transcript6337.chr17.nnic@NA	transcript6337.chr17.nnic	NA	68131293	68132783	Gene ID= novel_gene_chr17_6338 TPM= 28.02 Transcript Type= NA
chr17	68133201	68135935	68133201	68135935	+	ENST00000622750.1@AC005332.8	ENST00000622750.1	lincRNA	68133201	68135935	Gene ID= ENSG00000277476.1 TPM= 7.01 Transcript Type= lincRNA
chr17	68205489	68207493	68205489	68207493	+	ENST00000614046.1@AC005332.7	ENST00000614046.1	lincRNA	68205489	68207493	Gene ID= ENSG00000274712.1 TPM= 8.17 Transcript Type= lincRNA
chr17	68211375	68215566	68211375	68215566	+	transcript6339.chr17.nnic@NA	transcript6339.chr17.nnic	NA	68211375	68215566	Gene ID= novel_gene_chr17_6340 TPM= 4.67 Transcript Type= NA
chr17	68248021	68257153	68248021	68257153	+	transcript6344.chr17.nic@AMZ2	transcript6344.chr17.nic	protein_coding	68248021,68248640,68250188,68250794,68251050,68254404,68255700,68256814	68248086,68248705,68250480,68250967,68251178,68254567,68255876,68257153	Gene ID= ENSG00000196704.11 TPM= 3.89 Transcript Type= NA
chr17	68248043	68257154	68248043	68257154	+	ENST00000392720.6@AMZ2	ENST00000392720.6	protein_coding	68248043,68248640,68250188,68250794,68251050,68254404,68255700,68256814	68248086,68248705,68250470,68250967,68251178,68254567,68255876,68257154	Gene ID= ENSG00000196704.11 TPM= 17.9 Transcript Type= protein_coding
chr17	68247574	68257156	68247574	68257156	+	ENST00000359904.7@AMZ2	ENST00000359904.7	protein_coding	68247574,68250188,68250794,68251050,68254404,68255700,68256814	68248705,68250470,68250967,68251178,68254567,68255876,68257156	Gene ID= ENSG00000196704.11 TPM= 73.94 Transcript Type= protein_coding
chr17	68248035	68257139	68248035	68257139	+	ENST00000580753.5@AMZ2	ENST00000580753.5	protein_coding	68248035,68248644,68250188,68250794,68251050,68254404,68255700,68256814	68248058,68248705,68250470,68250967,68251178,68254567,68255876,68257139	Gene ID= ENSG00000196704.11 TPM= 4.67 Transcript Type= protein_coding
chr17	68268197	68291266	68268197	68291266	-	ENST00000580666.5@SLC16A6	ENST00000580666.5	protein_coding	68291086,68278089,68273927,68272639,68270839,68268197	68291266,68278327,68274070,68272767,68271654,68269346	Gene ID= ENSG00000108932.11 TPM= 1.17 Transcript Type= protein_coding
chr17	68421282	68457519	68421282	68457519	-	transcript6374.chr17.nic@WIPI1	transcript6374.chr17.nic	protein_coding	68457342,68452910,68450728,68444493,68436382,68435620,68433468,68429996,68428829,68427135,68426075,68421282	68457519,68452992,68450897,68444589,68436479,68435712,68433575,68430160,68428936,68427253,68426175,68421820	Gene ID= ENSG00000070540.12 TPM= 2.34 Transcript Type= NA
chr17	68425371	68457519	68425371	68457519	-	transcript6377.chr17.nic@WIPI1	transcript6377.chr17.nic	protein_coding	68457342,68452910,68450728,68444493,68436382,68435620,68434556,68433468,68429996,68428829,68427135,68425371	68457519,68452992,68450897,68444589,68436479,68435712,68434626,68433575,68430160,68428936,68427253,68426175	Gene ID= ENSG00000070540.12 TPM= 3.5 Transcript Type= NA
chr17	68421310	68457499	68421310	68457499	-	ENST00000589316.5@WIPI1	ENST00000589316.5	protein_coding	68457342,68452910,68450728,68444493,68436382,68435620,68434556,68433464,68429996,68428829,68427135,68426075,68421310	68457499,68452992,68450897,68444589,68436479,68435712,68434626,68433575,68430160,68428936,68427253,68426175,68421820	Gene ID= ENSG00000070540.12 TPM= 56.04 Transcript Type= nonsense_mediated_decay
chr17	68421309	68457499	68421309	68457499	-	ENST00000589459.5@WIPI1	ENST00000589459.5	protein_coding	68457342,68450728,68444493,68436382,68435620,68434556,68433464,68429996,68428829,68427135,68426075,68421309	68457499,68450897,68444589,68436479,68435712,68434626,68433575,68430160,68428936,68427253,68426175,68421820	Gene ID= ENSG00000070540.12 TPM= 1.17 Transcript Type= processed_transcript
chr17	68421282	68457421	68421282	68457421	-	ENST00000262139.9@WIPI1	ENST00000262139.9	protein_coding	68457342,68452910,68450728,68444493,68436382,68435620,68434556,68433468,68429996,68428829,68427135,68426075,68421282	68457421,68452992,68450897,68444589,68436479,68435712,68434626,68433575,68430160,68428936,68427253,68426175,68421820	Gene ID= ENSG00000070540.12 TPM= 1.17 Transcript Type= protein_coding
chr17	68421280	68422704	68421280	68422704	-	transcript6385.chr17.nnic@NA	transcript6385.chr17.nnic	NA	68421280	68422704	Gene ID= novel_gene_chr17_6386 TPM= 3.5 Transcript Type= NA
chr17	68512379	68533423	68512379	68533423	+	ENST00000392711.5@PRKAR1A	ENST00000392711.5	protein_coding	68512379,68515394,68522756,68523725,68524016,68524912,68525754,68527840,68528870,68529920,68530277	68512579,68515576,68522926,68523816,68524077,68524958,68525912,68527900,68528991,68530001,68533423	Gene ID= ENSG00000108946.14 TPM= 26.85 Transcript Type= protein_coding
chr17	68512675	68532762	68512675	68532762	+	transcript6410.chr17.nnic@PRKAR1A	transcript6410.chr17.nnic	protein_coding	68512675,68515394,68522756,68523725,68524016,68524912,68525754,68527840,68528870,68529920,68530277	68512970,68515576,68522926,68523816,68524077,68524958,68525912,68527900,68528991,68530001,68532762	Gene ID= ENSG00000108946.14 TPM= 75.31 Transcript Type= NA
chr17	68512032	68532762	68512032	68532762	+	ENST00000358598.6@PRKAR1A	ENST00000358598.6	protein_coding	68512032,68515394,68522756,68523725,68524016,68524912,68525754,68527840,68528870,68529920,68530277	68512142,68515576,68522926,68523816,68524077,68524958,68525912,68527900,68528991,68530001,68532762	Gene ID= ENSG00000108946.14 TPM= 203.75 Transcript Type= protein_coding
chr17	68512450	68532759	68512450	68532759	+	ENST00000392710.8@PRKAR1A	ENST00000392710.8	protein_coding	68512450,68515394,68522756,68523725,68524016,68524912,68525754,68527840,68528870,68529920,68530277	68512548,68515566,68522926,68523816,68524077,68524958,68525912,68527900,68528991,68530001,68532759	Gene ID= ENSG00000108946.14 TPM= 618.24 Transcript Type= nonsense_mediated_decay
chr17	68512427	68533431	68512427	68533431	+	ENST00000589228.5@PRKAR1A	ENST00000589228.5	protein_coding	68512427,68515394,68522756,68523725,68524016,68524912,68525754,68527840,68528870,68529920,68530277	68512548,68515576,68522926,68523816,68524077,68524958,68525912,68527900,68528991,68530001,68533431	Gene ID= ENSG00000108946.14 TPM= 28.02 Transcript Type= protein_coding
chr17	68512450	68532762	68512450	68532762	+	ENST00000536854.6@PRKAR1A	ENST00000536854.6	protein_coding	68512450,68514987,68515394,68522756,68523725,68524016,68524912,68525754,68527840,68528870,68529920,68530277	68512548,68515119,68515576,68522926,68523816,68524077,68524958,68525912,68527900,68528991,68530001,68532762	Gene ID= ENSG00000108946.14 TPM= 7.59 Transcript Type= protein_coding
chr17	68512415	68515815	68512415	68515815	+	ENST00000592194.1@PRKAR1A	ENST00000592194.1	protein_coding	68512415,68515394	68512548,68515815	Gene ID= ENSG00000108946.14 TPM= 1.17 Transcript Type= retained_intron
chr17	68537123	68601368	68537123	68601368	-	transcript6394.chr17.nic@FAM20A	transcript6394.chr17.nic	protein_coding	68600263,68555559,68554777,68551873,68543629,68542694,68541985,68540849,68540547,68539885,68539337,68537123	68601368,68555743,68554827,68551951,68543721,68542809,68542165,68540958,68540723,68539966,68539396,68537741	Gene ID= ENSG00000108950.11 TPM= 4.67 Transcript Type= NA
chr17	68537123	68601369	68537123	68601369	-	transcript6396.chr17.nnic@FAM20A	transcript6396.chr17.nnic	protein_coding	68600263,68555559,68554777,68551873,68543629,68542694,68541985,68540849,68540547,68539885,68539337,68537123	68601369,68555743,68554827,68551951,68543721,68542809,68542165,68541495,68540723,68539966,68539396,68537741	Gene ID= ENSG00000108950.11 TPM= 2.34 Transcript Type= NA
chr17	68537123	68600966	68537123	68600966	-	transcript6397.chr17.nnic@FAM20A	transcript6397.chr17.nnic	protein_coding	68600263,68555559,68554777,68551873,68543629,68542694,68541985,68540849,68540630,68539885,68539337,68537123	68600966,68555743,68554827,68551951,68543721,68542809,68542165,68540958,68540723,68539966,68539396,68537741	Gene ID= ENSG00000108950.11 TPM= 2.34 Transcript Type= NA
chr17	68536871	68601274	68536871	68601274	-	transcript6413.chr17.nic@FAM20A	transcript6413.chr17.nic	protein_coding	68600263,68555559,68554777,68551873,68543629,68542694,68540849,68540547,68539885,68539337,68536871	68601274,68555743,68554827,68551951,68543721,68542809,68542165,68540723,68539966,68539396,68537741	Gene ID= ENSG00000108950.11 TPM= 2.34 Transcript Type= NA
chr17	68537123	68601272	68537123	68601272	-	transcript6431.chr17.nic@FAM20A	transcript6431.chr17.nic	protein_coding	68600263,68555559,68554777,68551873,68543629,68542694,68540849,68539885,68539337,68537123	68601272,68555743,68554827,68551951,68543721,68542809,68542165,68539966,68539396,68537741	Gene ID= ENSG00000108950.11 TPM= 3.5 Transcript Type= NA
chr17	68550370	68600937	68550370	68600937	-	transcript6443.chr17.nic@FAM20A	transcript6443.chr17.nic	protein_coding	68600263,68555559,68554777,68550370	68600937,68555743,68554827,68551951	Gene ID= ENSG00000108950.11 TPM= 3.5 Transcript Type= NA
chr17	68550370	68600499	68550370	68600499	-	transcript6446.chr17.nic@FAM20A	transcript6446.chr17.nic	protein_coding	68600263,68555559,68550370	68600499,68555743,68554827	Gene ID= ENSG00000108950.11 TPM= 2.34 Transcript Type= NA
chr17	68589724	68601367	68589724	68601367	-	transcript6450.chr17.nic@FAM20A	transcript6450.chr17.nic	protein_coding	68600263,68589724	68601367,68590349	Gene ID= ENSG00000108950.11 TPM= 8.17 Transcript Type= NA
chr17	68536871	68601389	68536871	68601389	-	ENST00000592554.1@FAM20A	ENST00000592554.1	protein_coding	68600263,68555559,68554777,68551873,68543629,68542694,68541985,68540849,68539885,68539337,68536871	68601389,68555743,68554827,68551951,68543721,68542809,68542165,68540958,68539966,68539396,68537741	Gene ID= ENSG00000108950.11 TPM= 21.02 Transcript Type= protein_coding
chr17	68598005	68600539	68598005	68600539	-	transcript6453.chr17.nnic@NA	transcript6453.chr17.nnic	NA	68598005	68600539	Gene ID= novel_gene_chr17_6454 TPM= 3.5 Transcript Type= NA
chr17	68867292	68955407	68867292	68955407	-	transcript6455.chr17.nic@ABCA8	transcript6455.chr17.nic	protein_coding	68955219,68941939,68940758,68936951,68933168,68932288,68929561,68929049,68927916,68924701,68922242,68921382,68919301,68918427,68918047,68917361,68907740,68906044,68903301,68902713,68894880,68894173,68891489,68887336,68887017,68885196,68884331,68883791,68882599,68881863,68881120,68877519,68876628,68876460,68875614,68875260,68869700,68868301,68867292	68955407,68942039,68940962,68937115,68933271,68932514,68929702,68929234,68928063,68924869,68922300,68921492,68919476,68918546,68918185,68917451,68907879,68906163,68903499,68902879,68895013,68894310,68891596,68887506,68887130,68885315,68884396,68883882,68882719,68881980,68881211,68877679,68876703,68876554,68875733,68875400,68869779,68868356,68868183	Gene ID= ENSG00000141338.13 TPM= 7.01 Transcript Type= NA
chr17	68867292	68955392	68867292	68955392	-	ENST00000430352.6@ABCA8	ENST00000430352.6	protein_coding	68955219,68941939,68940758,68936951,68933168,68932288,68929561,68929049,68927916,68924701,68922242,68921382,68919301,68918427,68918047,68917361,68907740,68906044,68903301,68902713,68894880,68894173,68891489,68887336,68887017,68885196,68884331,68883791,68882599,68881863,68881120,68877519,68876628,68876460,68875614,68875260,68869700,68868301,68867292	68955392,68942039,68940962,68937115,68933271,68932514,68929702,68929234,68928063,68924869,68922300,68921492,68919476,68918546,68918185,68917451,68907879,68906163,68903499,68902879,68895013,68894310,68891596,68887506,68887130,68885315,68884396,68883882,68882704,68881980,68881211,68877679,68876703,68876554,68875733,68875400,68869779,68868356,68868183	Gene ID= ENSG00000141338.13 TPM= 8.17 Transcript Type= protein_coding
chr17	69078917	69098592	69078917	69098592	-	transcript6462.chr17.nic@ABCA6	transcript6462.chr17.nic	protein_coding	69097920,69096628,69096240,69091143,69089465,69088167,69087353,69086618,69085625,69085028,69084432,69084261,69083212,69082873,69081066,69079210,69078917	69098592,69096801,69096353,69091262,69089542,69088258,69087473,69086735,69085716,69085182,69084507,69084355,69083331,69083013,69081145,69079265,69079074	Gene ID= ENSG00000154262.12 TPM= 2.34 Transcript Type= NA
chr17	69273971	69327182	69273971	69327182	-	ENST00000593153.5@ABCA5	ENST00000593153.5	protein_coding	69327052,69325699,69314314,69313092,69309262,69308280,69306725,69304669,69302718,69301139,69297191,69294655,69291216,69289862,69289177,69287613,69286221,69285898,69283953,69277641,69273971	69327182,69325817,69314430,69313296,69309423,69308368,69306954,69304810,69302906,69301286,69297359,69294713,69291326,69290037,69289296,69287751,69286311,69286037,69284072,69277842,69274128	Gene ID= ENSG00000154265.15 TPM= 1.17 Transcript Type= protein_coding
chr17	69306865	69317422	69306865	69317422	-	transcript6465.chr17.nnic@ABCA5	transcript6465.chr17.nnic	protein_coding	69314314,69313092,69309262,69308280,69306865	69317422,69313296,69309425,69308368,69306954	Gene ID= ENSG00000154265.15 TPM= 8.17 Transcript Type= NA
chr17	69414698	69543331	69414698	69543331	+	ENST00000590474.5@MAP2K6	ENST00000590474.5	protein_coding	69414698,69505780,69516855,69517500,69519313,69520270,69521049,69523514,69524901,69526570,69536115,69541676	69415000,69505846,69516903,69517613,69519432,69520386,69521100,69523641,69524978,69526709,69536160,69543331	Gene ID= ENSG00000108984.13 TPM= 1.17 Transcript Type= protein_coding
chr17	70167014	70169004	70167014	70169004	-	transcript6471.chr17.nnic@NA	transcript6471.chr17.nnic	NA	70167014	70169004	Gene ID= novel_gene_chr17_6472 TPM= 2.34 Transcript Type= NA
chr17	70169535	70180048	70169535	70180048	+	ENST00000243457.3@KCNJ2	ENST00000243457.3	protein_coding	70169535,70174824	70169701,70180048	Gene ID= ENSG00000123700.4 TPM= 5.84 Transcript Type= protein_coding
chr17	72121020	72126420	72121020	72126420	+	ENST00000245479.2@SOX9	ENST00000245479.2	protein_coding	72121020,72122719,72123543	72121822,72122972,72126420	Gene ID= ENSG00000125398.5 TPM= 9.34 Transcript Type= protein_coding
chr17	72645950	73092688	72645950	73092688	-	ENST00000542342.6@SLC39A11	ENST00000542342.6	protein_coding	73092611,73088657,73084808,73031556,72947731,72849634,72736650,72649170,72648803,72645950	73092688,73088775,73084846,73031714,72947875,72849804,72736719,72649268,72648961,72647662	Gene ID= ENSG00000133195.11 TPM= 8.76 Transcript Type= protein_coding
chr17	72645949	73092693	72645949	73092693	-	ENST00000255559.7@SLC39A11	ENST00000255559.7	protein_coding	73092611,73088657,73084808,73031556,72947752,72849634,72736650,72649170,72648803,72645949	73092693,73088775,73084846,73031714,72947875,72849804,72736719,72649268,72648961,72647662	Gene ID= ENSG00000133195.11 TPM= 13.43 Transcript Type= protein_coding
chr17	73192632	73208503	73192632	73208503	+	ENST00000618996.4@COG1	ENST00000618996.4	protein_coding	73192632,73192934,73196507,73196900,73197226,73199865,73200566,73201109,73203000,73203632,73205553,73206154,73206708,73207181,73207702,73208314	73192831,73193384,73196751,73197081,73197396,73200021,73200776,73201900,73203146,73203793,73205680,73206262,73206817,73207256,73207739,73208503	Gene ID= ENSG00000166685.11 TPM= 1.75 Transcript Type= protein_coding
chr17	73192990	73208507	73192990	73208507	+	ENST00000299886.8@COG1	ENST00000299886.8	protein_coding	73192990,73196507,73196900,73197226,73199865,73200566,73201109,73203000,73203632,73205553,73206154,73206708,73207181,73208314	73193384,73196751,73197081,73197396,73200021,73200776,73201900,73203146,73203793,73205680,73206262,73206817,73207256,73208507	Gene ID= ENSG00000166685.11 TPM= 64.8 Transcript Type= protein_coding
chr17	73205106	73207447	73205106	73207447	-	transcript6523.chr17.nnic@NA	transcript6523.chr17.nnic	NA	73205106	73207447	Gene ID= novel_gene_chr17_6524 TPM= 4.67 Transcript Type= NA
chr17	73207353	73232371	73207353	73232371	-	ENST00000405159.7@FAM104A	ENST00000405159.7	protein_coding	73232086,73227165,73212678,73207353	73232371,73227264,73212740,73209768	Gene ID= ENSG00000133193.12 TPM= 22.77 Transcript Type= protein_coding
chr17	73207353	73232367	73207353	73232367	-	ENST00000403627.7@FAM104A	ENST00000403627.7	protein_coding	73232086,73227165,73207353	73232367,73227264,73209768	Gene ID= ENSG00000133193.12 TPM= 44.95 Transcript Type= protein_coding
chr17	73232381	73248947	73232381	73248947	+	transcript6503.chr17.nic@C17orf80	transcript6503.chr17.nic	protein_coding	73232381,73233220,73235476,73242244,73242896,73247241	73232489,73233325,73236995,73242351,73243003,73248947	Gene ID= ENSG00000141219.15 TPM= 4.09 Transcript Type= NA
chr17	73232622	73248947	73232622	73248947	+	ENST00000359042.6@C17orf80	ENST00000359042.6	protein_coding	73232622,73233220,73235476,73242244,73242896,73247241	73232717,73233325,73236995,73242351,73243003,73248947	Gene ID= ENSG00000141219.15 TPM= 12.84 Transcript Type= protein_coding
chr17	73232637	73248874	73232637	73248874	+	ENST00000268942.12@C17orf80	ENST00000268942.12	protein_coding	73232637,73233220,73235476,73242896,73247241	73232717,73233325,73236995,73243003,73248874	Gene ID= ENSG00000141219.15 TPM= 8.17 Transcript Type= protein_coding
chr17	73232662	73245344	73232662	73245344	+	ENST00000426147.6@C17orf80	ENST00000426147.6	protein_coding	73232662,73233220,73235476,73242244,73242896,73245168	73232717,73233325,73236995,73242351,73243003,73245344	Gene ID= ENSG00000141219.15 TPM= 1.17 Transcript Type= protein_coding
chr17	73283624	73312175	73283624	73312175	-	ENST00000335793.3@CDC42EP4	ENST00000335793.3	protein_coding	73311893,73283624	73312175,73286612	Gene ID= ENSG00000179604.9 TPM= 197.32 Transcript Type= protein_coding
chr17	73334384	73644089	73334384	73644089	-	ENST00000392650.7@SDK2	ENST00000392650.7	protein_coding	73644025,73507438,73472112,73455906,73447615,73440812,73437964,73437739,73435450,73433732,73431502,73430511,73423916,73423386,73422287,73419166,73415811,73414644,73401946,73401654,73401020,73399168,73398320,73398035,73395155,73394209,73393560,73391440,73390287,73387836,73386445,73385847,73383876,73380894,73379448,73379177,73368407,73365258,73361684,73358079,73352473,73350650,73350237,73348599,73334384	73644089,73507597,73472218,73456053,73447748,73440923,73438154,73437822,73435644,73433848,73431669,73430613,73424092,73423522,73422434,73419306,73415992,73414759,73402141,73401752,73401211,73399289,73398429,73398185,73395392,73394324,73393749,73391538,73390481,73388037,73386548,73385917,73384011,73380950,73379549,73379292,73368593,73365395,73361845,73358204,73352637,73350790,73350375,73348725,73338940	Gene ID= ENSG00000069188.16 TPM= 5.84 Transcript Type= protein_coding
chr17	74203653	74210655	74203653	74210655	+	ENST00000311111.10@RPL38	ENST00000311111.10	protein_coding	74203653,74203918,74204130,74209187,74209804	74203745,74203958,74204190,74209309,74210655	Gene ID= ENSG00000172809.12 TPM= 114.42 Transcript Type= protein_coding
chr17	74203582	74209880	74203582	74209880	+	ENST00000439590.6@RPL38	ENST00000439590.6	protein_coding	74203582,74203918,74204130,74209187,74209804	74203710,74203958,74204190,74209309,74209880	Gene ID= ENSG00000172809.12 TPM= 26.85 Transcript Type= protein_coding
chr17	74203693	74209878	74203693	74209878	+	ENST00000584577.5@RPL38	ENST00000584577.5	protein_coding	74203693,74203918,74204130,74209187,74209813	74203745,74203958,74204190,74209309,74209878	Gene ID= ENSG00000172809.12 TPM= 113.26 Transcript Type= protein_coding
chr17	74203704	74209896	74203704	74209896	+	ENST00000533498.1@RPL38	ENST00000533498.1	protein_coding	74203704,74204130,74209187,74209804	74203958,74204190,74209309,74209896	Gene ID= ENSG00000172809.12 TPM= 7.01 Transcript Type= protein_coding
chr17	74209980	74213321	74209980	74213321	-	ENST00000499670.2@MGC16275	ENST00000499670.2	antisense_RNA	74212524,74209980	74213321,74211682	Gene ID= ENSG00000246731.2 TPM= 1.17 Transcript Type= antisense_RNA
chr17	74247958	74262016	74247958	74262016	+	ENST00000441391.6@TTYH2	ENST00000441391.6	protein_coding	74247958,74249344,74249936,74250265,74252234,74253081,74253755,74260129	74249080,74249399,74250028,74250357,74252376,74253266,74253833,74262016	Gene ID= ENSG00000141540.10 TPM= 2.92 Transcript Type= protein_coding
chr17	74213514	74262020	74213514	74262020	+	ENST00000269346.8@TTYH2	ENST00000269346.8	protein_coding	74213514,74222485,74230888,74237294,74243374,74243977,74249011,74249344,74249936,74250265,74252234,74253081,74253755,74260129	74213716,74222657,74230999,74237514,74243469,74244049,74249080,74249399,74250028,74250357,74252376,74253266,74253833,74262020	Gene ID= ENSG00000141540.10 TPM= 18.1 Transcript Type= protein_coding
chr17	74432135	74451651	74432135	74451651	+	transcript6539.chr17.nic@GPRC5C	transcript6539.chr17.nic	protein_coding	74432135,74439745,74443818,74446849,74448823,74449335	74432523,74440827,74443912,74446998,74448915,74451651	Gene ID= ENSG00000170412.16 TPM= 2.34 Transcript Type= NA
chr17	74430913	74447429	74430913	74447429	+	ENST00000392627.5@GPRC5C	ENST00000392627.5	protein_coding	74430913,74439745,74443818,74446849	74432141,74440827,74443912,74447429	Gene ID= ENSG00000170412.16 TPM= 31.53 Transcript Type= protein_coding
chr17	74432135	74447429	74432135	74447429	+	transcript6544.chr17.nic@GPRC5C	transcript6544.chr17.nic	protein_coding	74432135,74439745,74443818,74446849	74432523,74440827,74443912,74447429	Gene ID= ENSG00000170412.16 TPM= 21.6 Transcript Type= NA
chr17	74443095	74447429	74443095	74447429	+	transcript6545.chr17.nic@GPRC5C	transcript6545.chr17.nic	protein_coding	74443095,74446849	74443912,74447429	Gene ID= ENSG00000170412.16 TPM= 3.5 Transcript Type= NA
chr17	74431528	74447429	74431528	74447429	+	ENST00000481232.1@GPRC5C	ENST00000481232.1	protein_coding	74431528,74439745,74443818,74446849	74432141,74440046,74443912,74447429	Gene ID= ENSG00000170412.16 TPM= 4.09 Transcript Type= protein_coding
chr17	74466363	74484796	74466363	74484796	+	transcript6546.chr17.nnic@CD300A	transcript6546.chr17.nnic	protein_coding	74466363,74473536,74474532,74477436,74481289,74481726,74484001	74466655,74473874,74474685,74477530,74481326,74481833,74484796	Gene ID= ENSG00000167851.13 TPM= 4.09 Transcript Type= NA
chr17	74469623	74484796	74469623	74484796	+	transcript6548.chr17.nic@CD300A	transcript6548.chr17.nic	protein_coding	74469623,74473536,74474532,74477436,74481289,74481726,74484001	74470242,74473874,74474685,74477530,74481326,74481833,74484796	Gene ID= ENSG00000167851.13 TPM= 4.09 Transcript Type= NA
chr17	74466649	74484790	74466649	74484790	+	transcript6549.chr17.nic@CD300A	transcript6549.chr17.nic	protein_coding	74466649,74473536,74474532,74477436,74481289,74484001	74466743,74473874,74474685,74477530,74481326,74484790	Gene ID= ENSG00000167851.13 TPM= 5.25 Transcript Type= NA
chr17	74466416	74484796	74466416	74484796	+	ENST00000360141.7@CD300A	ENST00000360141.7	protein_coding	74466416,74473536,74474532,74477436,74481289,74481726,74484001	74466743,74473874,74474685,74477530,74481326,74481833,74484796	Gene ID= ENSG00000167851.13 TPM= 21.6 Transcript Type= protein_coding
chr17	74541108	74546143	74541108	74546143	-	ENST00000330793.1@CD300C	ENST00000330793.1	protein_coding	74545722,74544609,74542861,74541108	74546143,74544947,74542987,74541736	Gene ID= ENSG00000167850.3 TPM= 12.84 Transcript Type= protein_coding
chr17	74609887	74623738	74609887	74623738	-	ENST00000392619.1@CD300E	ENST00000392619.1	protein_coding	74623582,74617118,74613925,74609887	74623738,74617465,74614033,74612773	Gene ID= ENSG00000186407.6 TPM= 10.51 Transcript Type= protein_coding
chr17	74694317	74712978	74694317	74712978	-	ENST00000326165.10@CD300LF	ENST00000326165.10	protein_coding	74712824,74704478,74703035,74698369,74696195,74695725,74694317	74712978,74704816,74703098,74698481,74696217,74695859,74695251	Gene ID= ENSG00000186074.18 TPM= 53.71 Transcript Type= protein_coding
chr17	74694318	74712954	74694318	74712954	-	ENST00000301573.13@CD300LF	ENST00000301573.13	protein_coding	74712824,74704478,74703035,74698576,74698369,74696195,74695725,74694318	74712954,74704816,74703098,74698621,74698481,74696217,74695859,74695251	Gene ID= ENSG00000186074.18 TPM= 2.34 Transcript Type= protein_coding
chr17	74694814	74712941	74694814	74712941	-	ENST00000583937.5@CD300LF	ENST00000583937.5	protein_coding	74712824,74704478,74703035,74698369,74696195,74695725,74694814	74712941,74704816,74703143,74698481,74696217,74695859,74695251	Gene ID= ENSG00000186074.18 TPM= 1.17 Transcript Type= protein_coding
chr17	74737230	74747335	74737230	74747335	+	ENST00000392612.7@RAB37	ENST00000392612.7	protein_coding	74737230,74742254,74743129,74743288,74744308,74744873,74745008,74745306	74737365,74742295,74743195,74743340,74744373,74744929,74745084,74747335	Gene ID= ENSG00000172794.19 TPM= 8.17 Transcript Type= protein_coding
chr17	74737217	74747300	74737217	74747300	+	ENST00000392613.9@RAB37	ENST00000392613.9	protein_coding	74737217,74740768,74742254,74743129,74743288,74744308,74744873,74745008,74745306	74737365,74740878,74742295,74743195,74743340,74744373,74744929,74745084,74747300	Gene ID= ENSG00000172794.19 TPM= 4.67 Transcript Type= protein_coding
chr17	74763824	74769353	74763824	74769353	+	transcript6577.chr17.nnic@SLC9A3R1	transcript6577.chr17.nnic	protein_coding	74763824,74766936,74768147,74768468	74764646,74766976,74768236,74769353	Gene ID= ENSG00000109062.11 TPM= 3.5 Transcript Type= NA
chr17	74766745	74769353	74766745	74769353	+	transcript6578.chr17.nic@SLC9A3R1	transcript6578.chr17.nic	protein_coding	74766745,74768147,74768468	74766976,74768236,74769353	Gene ID= ENSG00000109062.11 TPM= 2.34 Transcript Type= NA
chr17	74748652	74769353	74748652	74769353	+	ENST00000262613.9@SLC9A3R1	ENST00000262613.9	protein_coding	74748652,74762012,74763367,74766936,74768147,74768468	74749287,74762173,74763520,74766976,74768236,74769353	Gene ID= ENSG00000109062.11 TPM= 49.04 Transcript Type= protein_coding
chr17	74750724	74752360	74750724	74752360	-	transcript6579.chr17.nnic@NA	transcript6579.chr17.nnic	NA	74750724	74752360	Gene ID= novel_gene_chr17_6580 TPM= 3.5 Transcript Type= NA
chr17	74770547	74776341	74770547	74776341	-	transcript6595.chr17.nic@NAT9	transcript6595.chr17.nic	protein_coding	74776267,74775622,74773576,74772896,74771960,74770547	74776341,74775707,74773685,74773039,74772395,74771858	Gene ID= ENSG00000109065.11 TPM= 15.18 Transcript Type= NA
chr17	74770547	74776337	74770547	74776337	-	transcript6598.chr17.nic@NAT9	transcript6598.chr17.nic	protein_coding	74776267,74775622,74772896,74771960,74770547	74776337,74775707,74773685,74772277,74771858	Gene ID= ENSG00000109065.11 TPM= 4.67 Transcript Type= NA
chr17	74770547	74776341	74770547	74776341	-	transcript6601.chr17.nic@NAT9	transcript6601.chr17.nic	protein_coding	74776267,74775622,74773576,74771960,74770547	74776341,74775707,74773685,74773039,74771858	Gene ID= ENSG00000109065.11 TPM= 7.01 Transcript Type= NA
chr17	74770547	74776340	74770547	74776340	-	transcript6602.chr17.nic@NAT9	transcript6602.chr17.nic	protein_coding	74776267,74775622,74771960,74770547	74776340,74775707,74773685,74771858	Gene ID= ENSG00000109065.11 TPM= 7.01 Transcript Type= NA
chr17	74770567	74776339	74770567	74776339	-	ENST00000580301.5@NAT9	ENST00000580301.5	protein_coding	74776267,74775622,74773576,74772896,74772218,74771960,74770567	74776339,74775707,74773685,74773039,74772277,74772054,74771858	Gene ID= ENSG00000109065.11 TPM= 14.01 Transcript Type= protein_coding
chr17	74770581	74776323	74770581	74776323	-	ENST00000583834.5@NAT9	ENST00000583834.5	protein_coding	74776267,74775622,74773576,74772896,74771960,74770581	74776323,74775707,74773685,74773039,74772277,74771858	Gene ID= ENSG00000109065.11 TPM= 23.35 Transcript Type= retained_intron
chr17	74776483	74839779	74776483	74839779	+	ENST00000335464.9@TMEM104	ENST00000335464.9	protein_coding	74776483,74777264,74785482,74788789,74790200,74790956,74795012,74795524,74819750,74835927	74776577,74777375,74785603,74788870,74790296,74791036,74795111,74795632,74819843,74839779	Gene ID= ENSG00000109066.13 TPM= 40.87 Transcript Type= protein_coding
chr17	74776500	74839751	74776500	74839751	+	ENST00000582773.5@TMEM104	ENST00000582773.5	protein_coding	74776500,74777264,74785482,74788789,74790200,74790956,74795012,74795524,74819750,74838887	74776577,74777375,74785603,74788870,74790296,74791036,74795111,74795632,74819843,74839751	Gene ID= ENSG00000109066.13 TPM= 2.34 Transcript Type= protein_coding
chr17	74862497	74873023	74862497	74873023	-	ENST00000293195.9@FDXR	ENST00000293195.9	protein_coding	74872866,74872036,74866784,74866446,74866131,74865719,74864824,74864480,74864148,74863896,74863076,74862497	74873023,74872133,74866876,74866568,74866244,74865820,74864931,74864564,74864347,74864067,74863246,74862947	Gene ID= ENSG00000161513.11 TPM= 17.51 Transcript Type= protein_coding
chr17	74862499	74873006	74862499	74873006	-	ENST00000578473.5@FDXR	ENST00000578473.5	protein_coding	74872243,74872036,74866784,74866446,74866131,74865719,74864824,74864480,74864148,74863896,74863076,74862499	74873006,74872133,74866879,74866568,74866244,74865820,74864931,74864564,74864347,74864067,74863246,74862947	Gene ID= ENSG00000161513.11 TPM= 1.75 Transcript Type= retained_intron
chr17	74862505	74872968	74862505	74872968	-	ENST00000577509.5@FDXR	ENST00000577509.5	protein_coding	74872769,74872036,74866784,74866446,74866131,74865719,74864824,74864480,74864148,74863896,74863076,74862505	74872968,74872133,74866879,74866568,74866244,74865820,74864931,74864564,74864347,74864067,74863246,74862947	Gene ID= ENSG00000161513.11 TPM= 4.09 Transcript Type= nonsense_mediated_decay
chr17	74862501	74872961	74862501	74872961	-	ENST00000581530.5@FDXR	ENST00000581530.5	protein_coding	74872866,74872036,74866784,74866446,74866131,74865719,74864824,74864480,74864148,74863896,74863076,74862501	74872961,74872133,74866876,74866568,74866244,74865820,74864949,74864564,74864347,74864067,74863246,74862947	Gene ID= ENSG00000161513.11 TPM= 1.17 Transcript Type= protein_coding
chr17	74950744	74972757	74950744	74972757	-	transcript6622.chr17.nnic@HID1	transcript6622.chr17.nnic	protein_coding	74972591,74964483,74963740,74962965,74962234,74961873,74960026,74959881,74958911,74958673,74958327,74958141,74955792,74954138,74953545,74953006,74952269,74951905,74950744	74972757,74964632,74963910,74963081,74962340,74961989,74960248,74959937,74959051,74958763,74958478,74958219,74955956,74955332,74953651,74953086,74952360,74952063,74951633	Gene ID= ENSG00000167861.15 TPM= 6.62 Transcript Type= NA
chr17	74950744	74972757	74950744	74972757	-	transcript6626.chr17.nic@HID1	transcript6626.chr17.nic	protein_coding	74972591,74964483,74963740,74962965,74962234,74961873,74960026,74959881,74958911,74958327,74958141,74955792,74954138,74953545,74953006,74952269,74951905,74950744	74972757,74964632,74963910,74963081,74962340,74961989,74960248,74959937,74959051,74958763,74958219,74955956,74954365,74953651,74953086,74952360,74952063,74951633	Gene ID= ENSG00000167861.15 TPM= 10.12 Transcript Type= NA
chr17	74950744	74972734	74950744	74972734	-	ENST00000425042.6@HID1	ENST00000425042.6	protein_coding	74972591,74964483,74963740,74962965,74962234,74961873,74960026,74959881,74958911,74958673,74958327,74958141,74955792,74954138,74953545,74953006,74952269,74951905,74950744	74972734,74964632,74963910,74963081,74962340,74961989,74960248,74959937,74959051,74958763,74958478,74958219,74955956,74954365,74953651,74953086,74952360,74952063,74951633	Gene ID= ENSG00000167861.15 TPM= 38.15 Transcript Type= protein_coding
chr17	74987632	75005800	74987632	75005800	+	ENST00000337231.5@CDR2L	ENST00000337231.5	protein_coding	74987632,74999504,75001341,75002064,75003183	74988122,74999616,75001489,75002228,75005800	Gene ID= ENSG00000109089.7 TPM= 40.87 Transcript Type= protein_coding
chr17	75012674	75021261	75012674	75021261	+	ENST00000301585.9@MRPL58	ENST00000301585.9	protein_coding	75012674,75017078,75019700,75020313,75020488,75020921	75012872,75017114,75019759,75020395,75020657,75021261	Gene ID= ENSG00000167862.9 TPM= 16.35 Transcript Type= protein_coding
chr17	75038863	75046963	75038863	75046963	-	ENST00000301587.8@ATP5H	ENST00000301587.8	protein_coding	75046925,75042529,75042181,75040092,75039209,75038863	75046963,75042659,75042277,75040163,75039271,75039063	Gene ID= ENSG00000167863.11 TPM= 67.72 Transcript Type= protein_coding
chr17	75047245	75065884	75047245	75065884	+	ENST00000322444.6@KCTD2	ENST00000322444.6	protein_coding	75047245,75049220,75053014,75059510,75062120,75063018	75047589,75049328,75053105,75059605,75062245,75065884	Gene ID= ENSG00000180901.10 TPM= 57.21 Transcript Type= protein_coding
chr17	75087841	75106162	75087841	75106162	+	transcript6642.chr17.nic@SLC16A5	transcript6642.chr17.nic	protein_coding	75087841,75089151,75093589,75098038,75099957,75103970,75105880	75088044,75089304,75093835,75098181,75100816,75104180,75106162	Gene ID= ENSG00000170190.15 TPM= 3.12 Transcript Type= NA
chr17	75087841	75106162	75087841	75106162	+	transcript6644.chr17.nnic@SLC16A5	transcript6644.chr17.nnic	protein_coding	75087841,75089151,75093589,75098038,75100007,75104022,75105880	75088044,75089304,75093835,75098181,75100816,75104180,75106162	Gene ID= ENSG00000170190.15 TPM= 4.29 Transcript Type= NA
chr17	75087921	75106162	75087921	75106162	+	transcript6646.chr17.nic@SLC16A5	transcript6646.chr17.nic	protein_coding	75087921,75089114,75093589,75098038,75100007,75103970,75105880	75088044,75089304,75093835,75098181,75100816,75104180,75106162	Gene ID= ENSG00000170190.15 TPM= 4.47 Transcript Type= NA
chr17	75087939	75106162	75087939	75106162	+	transcript6649.chr17.nnic@SLC16A5	transcript6649.chr17.nnic	protein_coding	75087939,75089151,75093589,75098038,75100007,75103970,75105880	75088169,75089304,75093835,75098181,75100816,75104180,75106162	Gene ID= ENSG00000170190.15 TPM= 7.97 Transcript Type= NA
chr17	75087841	75106162	75087841	75106162	+	transcript6655.chr17.nic@SLC16A5	transcript6655.chr17.nic	protein_coding	75087841,75089151,75093589,75098038,75100007,75103970	75088044,75089304,75093835,75098181,75100816,75106162	Gene ID= ENSG00000170190.15 TPM= 15.56 Transcript Type= NA
chr17	75087765	75106162	75087765	75106162	+	transcript6657.chr17.nic@SLC16A5	transcript6657.chr17.nic	protein_coding	75087765,75093589,75098038,75100007,75103970	75089304,75093835,75098181,75100816,75106162	Gene ID= ENSG00000170190.15 TPM= 19.85 Transcript Type= NA
chr17	75093478	75106162	75093478	75106162	+	transcript6661.chr17.nic@SLC16A5	transcript6661.chr17.nic	protein_coding	75093478,75098038,75100007,75103970,75105880	75093835,75098181,75100816,75104180,75106162	Gene ID= ENSG00000170190.15 TPM= 4.47 Transcript Type= NA
chr17	75093478	75106162	75093478	75106162	+	transcript6663.chr17.nic@SLC16A5	transcript6663.chr17.nic	protein_coding	75093478,75098038,75100007,75103970	75093835,75098181,75100816,75106162	Gene ID= ENSG00000170190.15 TPM= 15.18 Transcript Type= NA
chr17	75087960	75106162	75087960	75106162	+	ENST00000329783.8@SLC16A5	ENST00000329783.8	protein_coding	75087960,75089151,75093589,75098038,75100007,75103970,75105880	75088044,75089304,75093835,75098181,75100816,75104180,75106162	Gene ID= ENSG00000170190.15 TPM= 19.65 Transcript Type= protein_coding
chr17	75110181	75114830	75110181	75114830	+	ENST00000584947.1@ARMC7	ENST00000584947.1	protein_coding	75110181,75110463,75114729	75110379,75110606,75114830	Gene ID= ENSG00000125449.6 TPM= 1.17 Transcript Type= protein_coding
chr17	75109987	75130265	75109987	75130265	+	ENST00000245543.5@ARMC7	ENST00000245543.5	protein_coding	75109987,75110463,75128677	75110379,75110606,75130265	Gene ID= ENSG00000125449.6 TPM= 29.19 Transcript Type= protein_coding
chr17	75109978	75114826	75109978	75114826	+	ENST00000582136.5@ARMC7	ENST00000582136.5	protein_coding	75109978,75110463,75114169	75110379,75110606,75114826	Gene ID= ENSG00000125449.6 TPM= 3.5 Transcript Type= protein_coding
chr17	75130228	75131809	75130228	75131809	-	transcript6670.chr17.nic@NT5C	transcript6670.chr17.nic	protein_coding	75131534,75131181,75130965,75130753,75130228	75131809,75131281,75131105,75130867,75130642	Gene ID= ENSG00000125458.6 TPM= 9.63 Transcript Type= NA
chr17	75130228	75131809	75130228	75131809	-	transcript6683.chr17.nic@NT5C	transcript6683.chr17.nic	protein_coding	75131534,75130965,75130228	75131809,75131281,75130867	Gene ID= ENSG00000125458.6 TPM= 7.88 Transcript Type= NA
chr17	75130228	75131809	75130228	75131809	-	transcript6688.chr17.nic@NT5C	transcript6688.chr17.nic	protein_coding	75131534,75130228	75131809,75131281	Gene ID= ENSG00000125458.6 TPM= 7.88 Transcript Type= NA
chr17	75130228	75131749	75130228	75131749	-	ENST00000583655.5@NT5C	ENST00000583655.5	protein_coding	75130965,75130753,75130228	75131749,75130867,75130642	Gene ID= ENSG00000125458.6 TPM= 11.97 Transcript Type= retained_intron
chr17	75130271	75131473	75130271	75131473	-	ENST00000582744.5@NT5C	ENST00000582744.5	protein_coding	75131181,75130965,75130753,75130271	75131473,75131105,75130867,75130642	Gene ID= ENSG00000125458.6 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr17	75135248	75154683	75135248	75154683	-	ENST00000409753.7@JPT1	ENST00000409753.7	protein_coding	75154342,75148529,75147556,75146666,75135248	75154683,75148671,75147653,75146684,75136250	Gene ID= ENSG00000189159.15 TPM= 31.53 Transcript Type= protein_coding
chr17	75180440	75180715	75180440	75180715	+	transcript6698.chr17.nnic@NA	transcript6698.chr17.nnic	NA	75180440	75180715	Gene ID= novel_gene_chr17_6699 TPM= 2.34 Transcript Type= NA
chr17	75205688	75235758	75205688	75235758	+	transcript6705.chr17.nic@NUP85	transcript6705.chr17.nic	protein_coding	75205688,75208527,75209823,75211992,75213076,75215754,75218185,75225103,75225342,75225698,75226051,75228998,75231340,75231573,75231828,75232851,75233058,75234637,75235100,75235578	75205794,75208620,75209985,75212062,75213119,75215823,75218306,75225237,75225464,75225829,75226157,75229131,75231423,75231638,75231979,75232968,75233158,75234788,75235201,75235758	Gene ID= ENSG00000125450.10 TPM= 7.01 Transcript Type= NA
chr17	75205679	75235758	75205679	75235758	+	transcript6710.chr17.nic@NUP85	transcript6710.chr17.nic	protein_coding	75205679,75208527,75209823,75211992,75213076,75215754,75218185,75225103,75225342,75225698,75226051,75231340,75231573,75231828,75232851,75233058,75234637,75235578	75205794,75208620,75209985,75212062,75213119,75215823,75218306,75225237,75225464,75225829,75226157,75231423,75231638,75231979,75232968,75233158,75235201,75235758	Gene ID= ENSG00000125450.10 TPM= 4.67 Transcript Type= NA
chr17	75205691	75235758	75205691	75235758	+	ENST00000245544.8@NUP85	ENST00000245544.8	protein_coding	75205691,75208527,75209823,75211992,75213076,75215754,75218185,75225103,75225342,75225698,75226051,75231340,75231573,75231828,75232851,75233058,75234637,75235100,75235578	75205794,75208620,75209985,75212062,75213119,75215823,75218306,75225237,75225464,75225829,75226157,75231423,75231638,75231979,75232968,75233158,75234788,75235201,75235758	Gene ID= ENSG00000125450.10 TPM= 38.53 Transcript Type= protein_coding
chr17	75236599	75261600	75236599	75261600	-	ENST00000621870.4@GGA3	ENST00000621870.4	protein_coding	75261548,75248840,75246712,75246509,75244619,75243447,75243063,75242831,75242336,75241615,75241400,75240812,75240342,75239789,75239375,75238914,75238652,75236599	75261600,75249008,75246796,75246584,75244717,75243570,75243166,75242911,75242473,75241696,75241516,75241057,75240412,75240108,75239571,75239083,75238762,75238389	Gene ID= ENSG00000125447.16 TPM= 10.06 Transcript Type= nonsense_mediated_decay
chr17	75236599	75261618	75236599	75261618	-	transcript6725.chr17.nic@GGA3	transcript6725.chr17.nic	protein_coding	75261548,75246712,75246509,75244619,75243447,75243063,75242831,75242336,75241615,75241400,75240812,75240342,75239789,75239375,75238914,75238652,75236599	75261618,75246796,75246584,75244717,75243570,75243166,75242911,75242473,75241696,75241516,75241057,75240412,75240108,75239571,75239083,75238762,75237532	Gene ID= ENSG00000125447.16 TPM= 3.15 Transcript Type= NA
chr17	75236599	75261804	75236599	75261804	-	ENST00000537686.5@GGA3	ENST00000537686.5	protein_coding	75261548,75246712,75246509,75244619,75243447,75243063,75242831,75242336,75241615,75241400,75240812,75240342,75239789,75239375,75238914,75238652,75236599	75261804,75246796,75246584,75244717,75243570,75243166,75242911,75242473,75241696,75241516,75241057,75240412,75240108,75239571,75239083,75238762,75238389	Gene ID= ENSG00000125447.16 TPM= 25.83 Transcript Type= protein_coding
chr17	75236599	75261618	75236599	75261618	-	transcript6740.chr17.nic@GGA3	transcript6740.chr17.nic	protein_coding	75261548,75246712,75246509,75244619,75243447,75243063,75242831,75242336,75241400,75240812,75240342,75239789,75239375,75238914,75236599	75261618,75246796,75246584,75244717,75243570,75243166,75242911,75242473,75241696,75241057,75240412,75240108,75239571,75239083,75238762	Gene ID= ENSG00000125447.16 TPM= 5.2 Transcript Type= NA
chr17	75236599	75261600	75236599	75261600	-	ENST00000538886.5@GGA3	ENST00000538886.5	protein_coding	75261548,75246712,75246509,75243447,75243063,75242831,75242336,75241615,75241400,75240812,75240342,75239789,75239375,75238914,75238652,75236599	75261600,75246796,75246584,75243570,75243166,75242911,75242473,75241696,75241516,75241057,75240412,75240108,75239571,75239083,75238762,75238389	Gene ID= ENSG00000125447.16 TPM= 9.48 Transcript Type= protein_coding
chr17	75261872	75266363	75261872	75266363	+	transcript6762.chr17.nic@MRPS7	transcript6762.chr17.nic	protein_coding	75261872,75262497,75262804,75263340,75265702,75266193	75261983,75262688,75262867,75263507,75265966,75266363	Gene ID= ENSG00000125445.10 TPM= 4.67 Transcript Type= NA
chr17	75261674	75266373	75261674	75266373	+	ENST00000245539.10@MRPS7	ENST00000245539.10	protein_coding	75261674,75262497,75262804,75263340,75265702	75261983,75262688,75262867,75263507,75266373	Gene ID= ENSG00000125445.10 TPM= 59.55 Transcript Type= protein_coding
chr17	75261912	75266330	75261912	75266330	+	ENST00000579002.5@MRPS7	ENST00000579002.5	protein_coding	75261912,75262804,75263340,75265702	75262688,75262867,75263507,75266330	Gene ID= ENSG00000125445.10 TPM= 5.84 Transcript Type= protein_coding
chr17	75266228	75271218	75266228	75271218	-	ENST00000325102.12@MIF4GD	ENST00000325102.12	protein_coding	75271144,75270114,75268083,75267746,75267538,75266228	75271218,75270245,75268192,75267901,75267630,75266967	Gene ID= ENSG00000125457.13 TPM= 26.66 Transcript Type= protein_coding
chr17	75266233	75271173	75266233	75271173	-	ENST00000245551.9@MIF4GD	ENST00000245551.9	protein_coding	75271144,75270114,75269347,75268083,75267746,75267538,75266233	75271173,75270245,75269448,75268192,75267901,75267630,75266967	Gene ID= ENSG00000125457.13 TPM= 5.06 Transcript Type= protein_coding
chr17	75266247	75271227	75266247	75271227	-	ENST00000579297.5@MIF4GD	ENST00000579297.5	protein_coding	75271144,75270114,75269347,75268083,75267746,75267538,75266247	75271227,75270245,75269469,75268192,75267901,75267630,75266967	Gene ID= ENSG00000125457.13 TPM= 3.5 Transcript Type= protein_coding
chr17	75266232	75270248	75266232	75270248	-	ENST00000618645.4@MIF4GD	ENST00000618645.4	protein_coding	75270114,75268083,75267746,75267538,75266232	75270248,75268192,75267901,75267630,75266967	Gene ID= ENSG00000125457.13 TPM= 4.47 Transcript Type= protein_coding
chr17	75271227	75274929	75271227	75274929	+	transcript6783.chr17.nnic@NA	transcript6783.chr17.nnic	NA	75271227	75274929	Gene ID= novel_gene_chr17_6784 TPM= 5.84 Transcript Type= NA
chr17	75272981	75289419	75272981	75289419	-	transcript6759.chr17.nic@SLC25A19	transcript6759.chr17.nic	protein_coding	75289354,75286633,75286304,75283423,75278152,75277353,75272981	75289419,75288591,75286459,75283593,75278335,75277483,75273639	Gene ID= ENSG00000125454.11 TPM= 5.06 Transcript Type= NA
chr17	75272992	75289390	75272992	75289390	-	ENST00000416858.6@SLC25A19	ENST00000416858.6	protein_coding	75289354,75288502,75286633,75286304,75283423,75278152,75277353,75272992	75289390,75288591,75286802,75286459,75283593,75278335,75277483,75273639	Gene ID= ENSG00000125454.11 TPM= 21.4 Transcript Type= protein_coding
chr17	75272993	75289390	75272993	75289390	-	ENST00000442286.6@SLC25A19	ENST00000442286.6	protein_coding	75289354,75286633,75286304,75283423,75278152,75277353,75272993	75289390,75286802,75286459,75283593,75278335,75277483,75273639	Gene ID= ENSG00000125454.11 TPM= 6.22 Transcript Type= protein_coding
chr17	75273030	75289411	75273030	75289411	-	ENST00000580994.5@SLC25A19	ENST00000580994.5	protein_coding	75289354,75288388,75286633,75286304,75283423,75278152,75277353,75273030	75289411,75288461,75286802,75286459,75283593,75278335,75277483,75273639	Gene ID= ENSG00000125454.11 TPM= 9.34 Transcript Type= protein_coding
chr17	75318076	75405653	75318076	75405653	-	ENST00000316804.9@GRB2	ENST00000316804.9	protein_coding	75405489,75393551,75332700,75325898,75321659,75318076	75405653,75393765,75332797,75326020,75321827,75320553	Gene ID= ENSG00000177885.13 TPM= 289.56 Transcript Type= protein_coding
chr17	75318076	75393864	75318076	75393864	-	ENST00000392564.5@GRB2	ENST00000392564.5	protein_coding	75393551,75332700,75325898,75321659,75318076	75393864,75332797,75326020,75321827,75320553	Gene ID= ENSG00000177885.13 TPM= 52.54 Transcript Type= protein_coding
chr17	75363585	75366514	75363585	75366514	+	transcript6799.chr17.nnic@NA	transcript6799.chr17.nnic	NA	75363585	75366514	Gene ID= novel_gene_chr17_6800 TPM= 4.67 Transcript Type= NA
chr17	75500261	75515583	75500261	75515583	-	ENST00000321617.7@CASKIN2	ENST00000321617.7	protein_coding	75515401,75513711,75508234,75507584,75506984,75506799,75506583,75506305,75505821,75505557,75504812,75504572,75504420,75504215,75503852,75503659,75503389,75501779,75501468,75500261	75515583,75514208,75508285,75507681,75507129,75506894,75506713,75506413,75505929,75505651,75505073,75504693,75504480,75504306,75503962,75503760,75503527,75503254,75501690,75501170	Gene ID= ENSG00000177303.9 TPM= 154.12 Transcript Type= protein_coding
chr17	75516519	75524733	75516519	75524733	+	transcript6851.chr17.nic@TSEN54	transcript6851.chr17.nic	protein_coding	75516519,75516746,75517009,75517161,75517557,75518995,75521409,75521705,75523275,75523663,75524262	75516616,75516910,75517072,75517244,75517655,75519047,75521510,75522521,75523335,75523779,75524733	Gene ID= ENSG00000182173.12 TPM= 5.84 Transcript Type= NA
chr17	75516519	75524733	75516519	75524733	+	transcript6856.chr17.nic@TSEN54	transcript6856.chr17.nic	protein_coding	75516519,75516746,75517009,75517161,75517557,75518995,75521409,75521705,75523663,75524262	75516616,75516910,75517072,75517244,75517655,75519047,75521510,75523335,75523779,75524733	Gene ID= ENSG00000182173.12 TPM= 4.67 Transcript Type= NA
chr17	75516519	75524733	75516519	75524733	+	transcript6857.chr17.nic@TSEN54	transcript6857.chr17.nic	protein_coding	75516519,75516746,75517009,75517161,75517557,75518995,75521409,75523275,75523663,75524262	75516616,75516910,75517072,75517244,75517655,75519047,75522333,75523335,75523779,75524733	Gene ID= ENSG00000182173.12 TPM= 3.5 Transcript Type= NA
chr17	75516519	75524733	75516519	75524733	+	transcript6859.chr17.nic@TSEN54	transcript6859.chr17.nic	protein_coding	75516519,75516746,75517161,75517557,75518995,75521409,75521705,75523275,75523663,75524262	75516616,75517072,75517244,75517655,75519047,75521510,75522333,75523335,75523779,75524733	Gene ID= ENSG00000182173.12 TPM= 4.67 Transcript Type= NA
chr17	75516525	75524739	75516525	75524739	+	ENST00000333213.10@TSEN54	ENST00000333213.10	protein_coding	75516525,75516746,75517009,75517161,75517557,75518995,75521409,75521705,75523275,75523663,75524262	75516616,75516910,75517072,75517244,75517655,75519047,75521510,75522333,75523335,75523779,75524739	Gene ID= ENSG00000182173.12 TPM= 57.21 Transcript Type= protein_coding
chr17	75521150	75525394	75521150	75525394	-	transcript6874.chr17.nnic@NA	transcript6874.chr17.nnic	NA	75524311,75523253,75521150	75525394,75523368,75522211	Gene ID= novel_gene_chr17_6875 TPM= 4.09 Transcript Type= NA
chr17	75521150	75525536	75521150	75525536	-	transcript6878.chr17.nnic@NA	transcript6878.chr17.nnic	NA	75524311,75523253,75521150	75525536,75523368,75522498	Gene ID= novel_gene_chr17_6879 TPM= 8.76 Transcript Type= NA
chr17	75521150	75525536	75521150	75525536	-	transcript6884.chr17.nnic@NA	transcript6884.chr17.nnic	NA	75524311,75521150	75525536,75523368	Gene ID= novel_gene_chr17_6885 TPM= 6.42 Transcript Type= NA
chr17	75525677	75575207	75525677	75575207	+	transcript6828.chr17.nic@LLGL2	transcript6828.chr17.nic	protein_coding	75525677,75543397,75556046,75558155,75558512,75559252,75563016,75563331,75563752,75564353,75568476,75568772,75568978,75569221,75569963,75570348,75570950,75571667,75571898,75573014,75573481,75573952,75574213,75574453,75574610,75574874	75525825,75543501,75556143,75558236,75558627,75559410,75563178,75563463,75563806,75564507,75568693,75568839,75569131,75569325,75570255,75570498,75571100,75571783,75572064,75573278,75573631,75573980,75574260,75574495,75574668,75575207	Gene ID= ENSG00000073350.13 TPM= 57.31 Transcript Type= NA
chr17	75525697	75575209	75525697	75575209	+	transcript6837.chr17.nic@LLGL2	transcript6837.chr17.nic	protein_coding	75525697,75543397,75556046,75558155,75558512,75559252,75563016,75563331,75563752,75564353,75568476,75568772,75568978,75569221,75569963,75570348,75570950,75571667,75571898,75573014,75573481,75573952,75574213,75574453,75574610	75525825,75543501,75556143,75558236,75558627,75559410,75563178,75563463,75563806,75564507,75568693,75568839,75569131,75569325,75570255,75570498,75571100,75571783,75572064,75573278,75573631,75573980,75574260,75574495,75575209	Gene ID= ENSG00000073350.13 TPM= 10.6 Transcript Type= NA
chr17	75525694	75575207	75525694	75575207	+	transcript6840.chr17.nic@LLGL2	transcript6840.chr17.nic	protein_coding	75525694,75543397,75556046,75558155,75558512,75559252,75563016,75563331,75563752,75564353,75568476,75568772,75568978,75569221,75569963,75570348,75570950,75571667,75571898,75573014,75573481,75573952,75574213,75574610,75574874	75525825,75543501,75556143,75558236,75558627,75559410,75563178,75563463,75563806,75564507,75568693,75568839,75569131,75569325,75570255,75570498,75571100,75571783,75572064,75573278,75573631,75573980,75574260,75574668,75575207	Gene ID= ENSG00000073350.13 TPM= 16.44 Transcript Type= NA
chr17	75525739	75575207	75525739	75575207	+	ENST00000392550.7@LLGL2	ENST00000392550.7	protein_coding	75525739,75543397,75556046,75558155,75558512,75559252,75563016,75563331,75563752,75564353,75568476,75568772,75568978,75569221,75569963,75570348,75570950,75571667,75571898,75573014,75573481,75573952,75574213,75574453,75574610,75574871	75525825,75543501,75556143,75558236,75558627,75559410,75563178,75563463,75563806,75564507,75568693,75568839,75569131,75569325,75570255,75570498,75571100,75571783,75572064,75573278,75573631,75573980,75574260,75574495,75574668,75575207	Gene ID= ENSG00000073350.13 TPM= 181.5 Transcript Type= protein_coding
chr17	75525732	75564721	75525732	75564721	+	ENST00000375227.8@LLGL2	ENST00000375227.8	protein_coding	75525732,75543397,75556046,75558155,75558512,75559252,75563016,75563331,75563752,75564353	75525825,75543501,75556143,75558236,75558627,75559410,75563178,75563463,75563806,75564721	Gene ID= ENSG00000073350.13 TPM= 34 Transcript Type= protein_coding
chr17	75525726	75575208	75525726	75575208	+	ENST00000167462.9@LLGL2	ENST00000167462.9	protein_coding	75525726,75543397,75556046,75558155,75558512,75559252,75563016,75563331,75563752,75564353,75568476,75568772,75568978,75569221,75569963,75570348,75570950,75571667,75571898,75573014,75573481,75573952,75574213,75574610,75574871	75525825,75543501,75556143,75558236,75558627,75559410,75563178,75563463,75563806,75564507,75568693,75568839,75569131,75569325,75570255,75570498,75571100,75571783,75572064,75573278,75573631,75573980,75574260,75574668,75575208	Gene ID= ENSG00000073350.13 TPM= 38.62 Transcript Type= protein_coding
chr17	75626854	75667198	75626854	75667198	-	transcript6890.chr17.nic@RECQL5	transcript6890.chr17.nic	protein_coding	75667044,75666428,75665051,75662479,75661606,75660955,75658298,75651186,75631450,75631150,75630974,75630779,75630619,75630184,75629708,75628934,75628672,75628218,75627623,75626854	75667198,75666571,75665172,75662997,75661708,75661066,75658460,75651265,75631668,75631249,75631010,75630837,75630692,75630277,75629842,75629475,75628825,75628442,75627692,75627522	Gene ID= ENSG00000108469.14 TPM= 7.3 Transcript Type= NA
chr17	75626854	75667188	75626854	75667188	-	transcript6892.chr17.nic@RECQL5	transcript6892.chr17.nic	protein_coding	75666428,75665051,75662479,75661606,75660955,75658298,75651186,75631450,75631150,75630974,75630779,75630619,75630184,75629708,75628934,75628672,75628218,75627623,75626854	75667188,75665172,75662997,75661708,75661066,75658460,75651265,75631668,75631249,75631010,75630837,75630692,75630277,75629842,75629475,75628762,75628442,75627692,75627522	Gene ID= ENSG00000108469.14 TPM= 10.02 Transcript Type= NA
chr17	75626854	75667198	75626854	75667198	-	transcript6893.chr17.nic@RECQL5	transcript6893.chr17.nic	protein_coding	75667044,75666428,75665051,75662479,75661606,75660955,75658298,75651186,75631450,75631150,75630974,75630779,75630619,75630184,75628934,75628672,75628218,75627623,75626854	75667198,75666571,75665172,75662997,75661708,75661066,75658460,75651265,75631668,75631249,75631010,75630837,75630692,75630277,75629842,75628762,75628442,75627692,75627522	Gene ID= ENSG00000108469.14 TPM= 6.52 Transcript Type= NA
chr17	75626854	75667189	75626854	75667189	-	ENST00000317905.9@RECQL5	ENST00000317905.9	protein_coding	75667044,75666428,75665051,75662479,75661606,75660955,75658298,75651186,75631450,75631150,75630974,75630779,75630619,75630184,75629708,75628934,75628672,75628218,75627623,75626854	75667189,75666571,75665172,75662997,75661708,75661066,75658460,75651265,75631668,75631249,75631010,75630837,75630692,75630277,75629842,75629475,75628762,75628442,75627692,75627522	Gene ID= ENSG00000108469.14 TPM= 14.69 Transcript Type= protein_coding
chr17	75633434	75641404	75633434	75641404	+	ENST00000375215.3@SMIM5	ENST00000375215.3	protein_coding	75633434,75640166,75640791	75634202,75640328,75641404	Gene ID= ENSG00000204323.5 TPM= 1.17 Transcript Type= protein_coding
chr17	75636595	75641400	75636595	75641400	+	ENST00000537494.1@SMIM5	ENST00000537494.1	protein_coding	75636595,75640791	75640328,75641400	Gene ID= ENSG00000204323.5 TPM= 1.17 Transcript Type= protein_coding
chr17	75646243	75647975	75646243	75647975	+	ENST00000556126.2@SMIM6	ENST00000556126.2	protein_coding	75646243,75646655,75647371	75646371,75646786,75647975	Gene ID= ENSG00000259120.2 TPM= 1.17 Transcript Type= protein_coding
chr17	75667116	75708059	75667116	75708059	+	ENST00000584667.5@SAP30BP	ENST00000584667.5	protein_coding	75667116,75668516,75671816,75693440,75699783,75702480,75703311,75703808,75704756,75706008,75706340	75667478,75668625,75671863,75693482,75699871,75702571,75703371,75703859,75704814,75706092,75708059	Gene ID= ENSG00000161526.14 TPM= 44.37 Transcript Type= protein_coding
chr17	75667325	75706757	75667325	75706757	+	transcript6921.chr17.nic@SAP30BP	transcript6921.chr17.nic	protein_coding	75667325,75668516,75671816,75693440,75699783,75702480,75703311,75703808,75704756,75706340	75667478,75668625,75671863,75693482,75699871,75702571,75703371,75703859,75706092,75706757	Gene ID= ENSG00000161526.14 TPM= 9.34 Transcript Type= NA
chr17	75667374	75706756	75667374	75706756	+	ENST00000580322.5@SAP30BP	ENST00000580322.5	protein_coding	75667374,75668516,75671816,75693440,75699783,75702480,75703311,75703808,75704756,75705611,75706340	75667478,75668625,75671863,75693482,75699871,75702571,75703371,75703859,75704814,75706092,75706756	Gene ID= ENSG00000161526.14 TPM= 4.67 Transcript Type= nonsense_mediated_decay
chr17	75721166	75757818	75721166	75757818	+	transcript6931.chr17.nic@ITGB4	transcript6931.chr17.nic	protein_coding	75721166,75724694,75727195,75727404,75727651,75728377,75729265,75730241,75730875,75731246,75731812,75732163,75733490,75736051,75736288,75736565,75737322,75737538,75739672,75739880,75740358,75740793,75740982,75742341,75742582,75743713,75748841,75750111,75750680,75750974,75752174,75752446,75754576,75755055,75755701,75756429,75756704,75756943,75757200,75757416	75721563,75724782,75727277,75727505,75727855,75728473,75729436,75730504,75730964,75731368,75731973,75732239,75733692,75736154,75736386,75736694,75737444,75737644,75739705,75740071,75740461,75740851,75741005,75742489,75742761,75743861,75749045,75750268,75750860,75751111,75752356,75752577,75754815,75755213,75755850,75756617,75756859,75757107,75757310,75757818	Gene ID= ENSG00000132470.13 TPM= 36.63 Transcript Type= NA
chr17	75721177	75757818	75721177	75757818	+	transcript6932.chr17.nic@ITGB4	transcript6932.chr17.nic	protein_coding	75721177,75724694,75727195,75727404,75727651,75728377,75729265,75730241,75730875,75731246,75731812,75732163,75733490,75736051,75736288,75736565,75737322,75737538,75739672,75739880,75740358,75740793,75740982,75742341,75742582,75743713,75748841,75750111,75750680,75750974,75752174,75752446,75754576,75755055,75755701,75756429,75756704,75756943,75757200,75757416	75721612,75724782,75727277,75727505,75727855,75728473,75729436,75730504,75730964,75731368,75731973,75732239,75733692,75736154,75736386,75736694,75737444,75737644,75739705,75740071,75740461,75740851,75741005,75742489,75742761,75743861,75749045,75750268,75750860,75751111,75752356,75752577,75754815,75755213,75755850,75756617,75756859,75757107,75757310,75757818	Gene ID= ENSG00000132470.13 TPM= 24.95 Transcript Type= NA
chr17	75721497	75757815	75721497	75757815	+	ENST00000450894.7@ITGB4	ENST00000450894.7	protein_coding	75721497,75724694,75727195,75727404,75727651,75728377,75729265,75730241,75730875,75731246,75731812,75732163,75733490,75736051,75736288,75736565,75737322,75737538,75739672,75739880,75740358,75740793,75740982,75742341,75742582,75743713,75748841,75750111,75750680,75750974,75752174,75752446,75754576,75755701,75756429,75756704,75756943,75757200,75757416	75721612,75724782,75727277,75727505,75727855,75728473,75729436,75730504,75730964,75731368,75731973,75732239,75733692,75736154,75736386,75736694,75737444,75737644,75739705,75740071,75740461,75740851,75741005,75742489,75742761,75743861,75749045,75750268,75750860,75751111,75752356,75752577,75754815,75755850,75756617,75756859,75757107,75757310,75757815	Gene ID= ENSG00000132470.13 TPM= 26.5 Transcript Type= protein_coding
chr17	75757944	75765711	75757944	75765711	-	ENST00000588479.5@GALK1	ENST00000588479.5	protein_coding	75764972,75763897,75763320,75763014,75762704,75758449,75758210,75757944	75765711,75764086,75763439,75763149,75762885,75758599,75758372,75758127	Gene ID= ENSG00000108479.11 TPM= 56.04 Transcript Type= protein_coding
chr17	75778072	75779772	75778072	75779772	-	ENST00000586518.1@H3F3B	ENST00000586518.1	protein_coding	75778072	75779772	Gene ID= ENSG00000132475.10 TPM= 5.84 Transcript Type= retained_intron
chr17	75776434	75779779	75776434	75779779	-	ENST00000254810.8@H3F3B	ENST00000254810.8	protein_coding	75779657,75779047,75778810,75776434	75779779,75779184,75778963,75778723	Gene ID= ENSG00000132475.10 TPM= 107.42 Transcript Type= protein_coding
chr17	75778574	75779780	75778574	75779780	-	ENST00000589599.5@H3F3B	ENST00000589599.5	protein_coding	75779647,75779047,75778810,75778574	75779780,75779184,75778963,75778723	Gene ID= ENSG00000132475.10 TPM= 11.68 Transcript Type= protein_coding
chr17	75784855	75794198	75784855	75794198	+	ENST00000586527.1@UNK	ENST00000586527.1	protein_coding	75784855,75791760,75792313,75793443	75784984,75792019,75792478,75794198	Gene ID= ENSG00000132478.9 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr17	75827225	75846098	75827225	75846098	-	transcript6974.chr17.nic@UNC13D	transcript6974.chr17.nic	protein_coding	75844221,75843484,75843159,75843014,75842857,75842433,75840957,75840762,75840507,75840225,75840018,75839839,75836801,75836572,75836339,75836200,75836012,75835855,75835647,75835409,75834920,75834618,75834325,75834075,75832966,75831243,75831098,75830578,75830362,75830028,75828787,75827957,75827225	75846098,75843519,75843266,75843073,75842923,75842613,75841001,75840830,75840576,75840329,75840110,75839942,75836918,75836696,75836429,75836256,75836109,75835906,75835777,75835529,75835063,75834716,75834531,75834143,75833045,75831348,75831169,75830661,75830482,75830151,75828983,75828086,75827445	Gene ID= ENSG00000092929.11 TPM= 10.26 Transcript Type= NA
chr17	75827225	75844203	75827225	75844203	-	transcript6981.chr17.nic@UNC13D	transcript6981.chr17.nic	protein_coding	75843663,75843484,75843159,75843014,75842857,75842433,75840957,75840762,75840507,75840225,75840018,75839839,75836801,75836572,75836339,75836200,75836012,75835855,75835647,75835409,75834920,75834618,75834325,75834075,75832966,75831243,75831098,75830578,75830362,75830028,75828787,75827225	75844203,75843519,75843266,75843073,75842923,75842613,75841001,75840830,75840576,75840329,75840110,75839942,75836918,75836696,75836429,75836256,75836109,75835906,75835777,75835529,75835063,75834716,75834531,75834143,75833045,75831348,75831169,75830661,75830482,75830151,75828983,75828086	Gene ID= ENSG00000092929.11 TPM= 10.85 Transcript Type= NA
chr17	75841136	75846471	75841136	75846471	-	transcript7015.chr17.nic@UNC13D	transcript7015.chr17.nic	protein_coding	75843484,75843159,75843014,75841136	75846471,75843266,75843073,75842923	Gene ID= ENSG00000092929.11 TPM= 11.68 Transcript Type= NA
chr17	75827225	75844717	75827225	75844717	-	ENST00000207549.8@UNC13D	ENST00000207549.8	protein_coding	75844221,75843484,75843159,75843014,75842857,75842433,75840957,75840762,75840507,75840225,75840018,75839839,75836801,75836572,75836339,75836200,75836012,75835855,75835647,75835409,75834920,75834618,75834325,75834075,75832966,75831243,75831098,75830578,75830362,75830028,75828787,75827225	75844717,75843519,75843266,75843073,75842923,75842613,75841001,75840830,75840576,75840329,75840110,75839942,75836918,75836696,75836429,75836256,75836109,75835906,75835777,75835529,75835063,75834716,75834531,75834143,75833045,75831348,75831169,75830661,75830482,75830151,75828983,75828086	Gene ID= ENSG00000092929.11 TPM= 237.36 Transcript Type= protein_coding
chr17	75845709	75855322	75845709	75855322	-	ENST00000585462.5@WBP2	ENST00000585462.5	protein_coding	75855180,75851568,75849604,75848570,75847796,75847487,75846908,75845709	75855322,75851676,75849739,75848662,75847930,75847609,75846984,75846787	Gene ID= ENSG00000132471.11 TPM= 68.3 Transcript Type= protein_coding
chr17	75845744	75855325	75845744	75855325	-	transcript7007.chr17.nic@WBP2	transcript7007.chr17.nic	protein_coding	75855239,75851568,75849604,75847796,75847487,75846908,75845744	75855325,75851676,75849739,75848662,75847609,75846984,75846787	Gene ID= ENSG00000132471.11 TPM= 9.92 Transcript Type= NA
chr17	75845744	75847234	75845744	75847234	-	transcript7019.chr17.nnic@WBP2	transcript7019.chr17.nnic	protein_coding	75847179,75846908,75845744	75847234,75846984,75846787	Gene ID= ENSG00000132471.11 TPM= 95.74 Transcript Type= NA
chr17	75845699	75855420	75845699	75855420	-	ENST00000254806.7@WBP2	ENST00000254806.7	protein_coding	75855239,75851568,75849604,75848570,75847796,75847487,75846908,75845699	75855420,75851676,75849739,75848662,75847930,75847609,75846984,75846787	Gene ID= ENSG00000132471.11 TPM= 193.82 Transcript Type= protein_coding
chr17	75874164	75878553	75874164	75878553	-	transcript7027.chr17.nnic@TRIM47	transcript7027.chr17.nnic	protein_coding	75877721,75876718,75876262,75875901,75875400,75874164	75878553,75876813,75876492,75876099,75875474,75875123	Gene ID= ENSG00000132481.6 TPM= 4.05 Transcript Type= NA
chr17	75874164	75878643	75874164	75878643	-	transcript7045.chr17.nic@TRIM47	transcript7045.chr17.nic	protein_coding	75877874,75876718,75875901,75875400,75874164	75878643,75876813,75876492,75875474,75875123	Gene ID= ENSG00000132481.6 TPM= 4.44 Transcript Type= NA
chr17	75874161	75878575	75874161	75878575	-	ENST00000254816.5@TRIM47	ENST00000254816.5	protein_coding	75877874,75876718,75876262,75875901,75875400,75874161	75878575,75876813,75876492,75876099,75875474,75875123	Gene ID= ENSG00000132481.6 TPM= 83.45 Transcript Type= protein_coding
chr17	75874164	75878196	75874164	75878196	-	ENST00000587339.2@TRIM47	ENST00000587339.2	protein_coding	75877851,75876718,75876262,75875901,75875400,75874164	75878196,75876813,75876492,75876099,75875474,75875123	Gene ID= ENSG00000132481.6 TPM= 6.39 Transcript Type= nonsense_mediated_decay
chr17	75879732	75896951	75879732	75896951	-	transcript7021.chr17.nnic@TRIM65	transcript7021.chr17.nnic	protein_coding	75896524,75892755,75892267,75892011,75891813,75891172,75879732	75896951,75892850,75892500,75892185,75891878,75891347,75880629	Gene ID= ENSG00000141569.10 TPM= 2.34 Transcript Type= NA
chr17	75888960	75896957	75888960	75896957	-	transcript7037.chr17.nnic@TRIM65	transcript7037.chr17.nnic	protein_coding	75896524,75892755,75892267,75892011,75891813,75888960	75896957,75892850,75892539,75892185,75891878,75891347	Gene ID= ENSG00000141569.10 TPM= 2.34 Transcript Type= NA
chr17	75888963	75896969	75888963	75896969	-	transcript7039.chr17.nnic@TRIM65	transcript7039.chr17.nnic	protein_coding	75896524,75892755,75892267,75892011,75889223,75888963	75896969,75892850,75892500,75892185,75891347,75889074	Gene ID= ENSG00000141569.10 TPM= 2.34 Transcript Type= NA
chr17	75888960	75896969	75888960	75896969	-	transcript7046.chr17.nnic@TRIM65	transcript7046.chr17.nnic	protein_coding	75896524,75892267,75892011,75891813,75888960	75896969,75892500,75892185,75891878,75891347	Gene ID= ENSG00000141569.10 TPM= 2.34 Transcript Type= NA
chr17	75888963	75896969	75888963	75896969	-	transcript7048.chr17.nnic@TRIM65	transcript7048.chr17.nnic	protein_coding	75896524,75892755,75892267,75892011,75888963	75896969,75892850,75892539,75892185,75891347	Gene ID= ENSG00000141569.10 TPM= 3.5 Transcript Type= NA
chr17	75888960	75897003	75888960	75897003	-	ENST00000269383.7@TRIM65	ENST00000269383.7	protein_coding	75896524,75892755,75892267,75892011,75891813,75888960	75897003,75892850,75892500,75892185,75891878,75891347	Gene ID= ENSG00000141569.10 TPM= 63.05 Transcript Type= protein_coding
chr17	75898644	75904916	75898644	75904916	-	transcript7064.chr17.nic@MRPL38	transcript7064.chr17.nic	protein_coding	75904809,75904540,75902020,75901201,75900982,75899516,75899158,75898644	75904916,75904719,75902154,75901920,75901027,75899674,75899294,75898986	Gene ID= ENSG00000204316.12 TPM= 8.17 Transcript Type= NA
chr17	75898643	75905413	75898643	75905413	-	ENST00000309352.3@MRPL38	ENST00000309352.3	protein_coding	75904809,75904540,75902020,75901712,75901201,75900982,75899516,75899158,75898643	75905413,75904719,75902154,75901920,75901273,75901027,75899674,75899294,75898986	Gene ID= ENSG00000204316.12 TPM= 131.94 Transcript Type= protein_coding
chr17	75909844	75941034	75909844	75941034	-	transcript7075.chr17.nnic@FBF1	transcript7075.chr17.nnic	protein_coding	75940848,75938147,75937566,75935632,75932995,75931229,75929997,75928076,75927455,75926758,75926030,75925347,75923186,75921945,75921472,75921244,75920355,75920007,75919668,75918162,75917931,75917732,75915017,75914747,75914122,75913913,75913702,75912192,75909844	75941034,75938232,75937593,75935673,75933088,75931289,75930047,75928193,75927532,75926877,75926163,75925446,75923638,75922046,75921560,75921302,75920429,75920107,75919874,75918269,75918070,75917850,75915139,75914932,75914298,75914050,75913819,75912307,75910806	Gene ID= ENSG00000188878.19 TPM= 2.34 Transcript Type= NA
chr17	75909574	75941038	75909574	75941038	-	ENST00000586717.5@FBF1	ENST00000586717.5	protein_coding	75940848,75938147,75937566,75932995,75931229,75929997,75928076,75927455,75926758,75926288,75926030,75925347,75923186,75921945,75921472,75921244,75920274,75920007,75919668,75918162,75917931,75917732,75915017,75914747,75914122,75913913,75913702,75912192,75909574	75941038,75938232,75937593,75933088,75931289,75930047,75928193,75927532,75926877,75926426,75926163,75925446,75923641,75922046,75921560,75921302,75920429,75920107,75919874,75918269,75918070,75917850,75915139,75914932,75914295,75914050,75913819,75912307,75910806	Gene ID= ENSG00000188878.19 TPM= 1.17 Transcript Type= protein_coding
chr17	75942878	75979202	75942878	75979202	-	transcript7089.chr17.nic@ACOX1	transcript7089.chr17.nic	protein_coding	75978965,75978534,75960215,75957459,75955828,75955566,75953451,75951415,75950774,75949718,75949495,75949217,75948251,75946707,75942878	75979202,75978693,75960375,75957566,75955947,75955681,75953620,75951577,75950964,75949897,75949600,75949360,75948457,75946795,75943213	Gene ID= ENSG00000161533.11 TPM= 4.67 Transcript Type= NA
chr17	75946577	75979134	75946577	75979134	-	ENST00000301608.8@ACOX1	ENST00000301608.8	protein_coding	75978965,75978534,75973625,75957459,75955828,75955566,75953451,75951415,75950774,75949718,75949495,75949217,75948251,75946577	75979134,75978693,75973785,75957566,75955947,75955681,75953620,75951577,75950964,75949897,75949600,75949360,75948457,75946795	Gene ID= ENSG00000161533.11 TPM= 1.17 Transcript Type= protein_coding
chr17	75979216	76005998	75979216	76005998	+	transcript7102.chr17.nnic@TEN1-CDK3	transcript7102.chr17.nnic	protein_coding	75979216,75986187,75991466,76000141,76001412,76001874,76002022,76002248,76002511,76003195,76005298	75979511,75986284,75991623,76000389,76001541,76001951,76002142,76002418,76002612,76003398,76005998	Gene ID= ENSG00000261408.6 TPM= 3.21 Transcript Type= NA
chr17	75979269	76005998	75979269	76005998	+	transcript7103.chr17.nnic@TEN1-CDK3	transcript7103.chr17.nnic	protein_coding	75979269,75986187,75991466,76000141,76001412,76001874,76002022,76002248,76002511,76003195,76005298	75979511,75986284,75991623,76000489,76001541,76001951,76002142,76002418,76002612,76003398,76005998	Gene ID= ENSG00000261408.6 TPM= 3.21 Transcript Type= NA
chr17	75979216	76005998	75979216	76005998	+	transcript7108.chr17.nnic@TEN1-CDK3	transcript7108.chr17.nnic	protein_coding	75979216,75986187,75991466,76000141,76001412,76002022,76002263,76002511,76003195,76005298	75979511,75986284,75991623,76000489,76001951,76002142,76002418,76002612,76003398,76005998	Gene ID= ENSG00000261408.6 TPM= 3.21 Transcript Type= NA
chr17	75979216	76005998	75979216	76005998	+	transcript7113.chr17.nic@TEN1-CDK3	transcript7113.chr17.nic	protein_coding	75979216,75986187,75991466,76000141,76002022,76002248,76002511,76003195,76005298	75979511,75986284,75991623,76001951,76002142,76002418,76002612,76003398,76005998	Gene ID= ENSG00000261408.6 TPM= 10.51 Transcript Type= NA
chr17	75979260	76005999	75979260	76005999	+	ENST00000569284.1@TEN1-CDK3	ENST00000569284.1	protein_coding	75979260,75986187,75991466,76000141,76001874,76002022,76002248,76002511,76003195,76005298	75979511,75986284,75991623,76001541,76001951,76002142,76002418,76002612,76003398,76005999	Gene ID= ENSG00000261408.6 TPM= 10.22 Transcript Type= protein_coding
chr17	75979231	76005998	75979231	76005998	+	ENST00000567351.5@TEN1-CDK3	ENST00000567351.5	protein_coding	75979231,75986187,75991466,76000141,76001874,76002022,76002248,76002511,76005298	75979511,75986284,75991623,76001541,76001951,76002142,76002418,76003398,76005998	Gene ID= ENSG00000261408.6 TPM= 2.34 Transcript Type= retained_intron
chr17	75979220	76000586	75979220	76000586	+	ENST00000397640.5@TEN1	ENST00000397640.5	protein_coding	75979220,75986187,75991466,76000141	75979511,75986284,75991623,76000586	Gene ID= ENSG00000257949.6 TPM= 16.35 Transcript Type= protein_coding
chr17	76006845	76027452	76006845	76027452	-	ENST00000301607.7@EVPL	ENST00000301607.7	protein_coding	76027101,76024021,76023500,76023292,76022413,76022189,76021867,76021674,76021468,76019528,76018914,76018446,76018161,76017739,76015450,76015227,76014916,76014426,76012006,76011772,76011576,76006845	76027452,76024120,76023654,76023418,76022538,76022227,76022028,76021781,76021563,76019653,76019060,76018600,76018258,76017911,76015628,76015365,76015109,76014576,76012089,76011882,76011668,76010543	Gene ID= ENSG00000167880.7 TPM= 103.92 Transcript Type= protein_coding
chr17	76038775	76053648	76038775	76053648	-	ENST00000602720.5@SRP68	ENST00000602720.5	protein_coding	76053449,76050428,76047906,76046038,76045292,76043829,76040903,76040419,76038775	76053648,76050526,76047970,76046194,76045386,76043958,76040978,76040474,76039933	Gene ID= ENSG00000167881.14 TPM= 1.17 Transcript Type= protein_coding
chr17	76039106	76072507	76039106	76072507	-	ENST00000539137.5@SRP68	ENST00000539137.5	protein_coding	76072308,76070378,76063976,76061492,76061110,76060308,76057403,76050428,76047906,76046038,76045292,76043829,76040903,76040419,76039106	76072507,76070444,76064171,76061574,76061219,76060390,76057543,76050526,76047970,76046194,76045386,76043958,76040978,76040474,76039933	Gene ID= ENSG00000167881.14 TPM= 4.67 Transcript Type= protein_coding
chr17	76039106	76053656	76039106	76053656	-	ENST00000542536.6@SRP68	ENST00000542536.6	protein_coding	76053449,76050428,76047906,76046038,76045292,76043829,76040903,76040419,76039106	76053656,76050526,76047970,76046194,76045386,76043958,76040978,76040474,76039933	Gene ID= ENSG00000167881.14 TPM= 1.17 Transcript Type= processed_transcript
chr17	76083577	76103787	76083577	76103787	-	transcript7148.chr17.nic@EXOC7	transcript7148.chr17.nic	protein_coding	76103633,76103361,76101679,76101271,76097796,76094414,76089175,76088771,76088060,76087654,76086080,76085677,76085314,76084517,76084248,76084006,76083577	76103787,76103426,76101863,76101376,76098018,76094581,76089320,76088923,76088562,76087720,76086145,76085797,76085409,76084580,76084289,76084139,76083750	Gene ID= ENSG00000182473.21 TPM= 11.38 Transcript Type= NA
chr17	76081017	76103695	76081017	76103695	-	ENST00000332065.9@EXOC7	ENST00000332065.9	protein_coding	76103633,76103361,76101679,76101271,76097796,76094414,76089175,76088771,76088464,76088060,76087654,76086080,76085677,76085314,76084517,76084248,76084006,76081017	76103695,76103426,76101863,76101376,76098018,76094581,76089320,76088923,76088562,76088122,76087720,76086145,76085797,76085409,76084580,76084289,76084139,76083750	Gene ID= ENSG00000182473.21 TPM= 112.67 Transcript Type= protein_coding
chr17	76092315	76103743	76092315	76103743	-	ENST00000405068.3@EXOC7	ENST00000405068.3	protein_coding	76103633,76103361,76101679,76101271,76097796,76092315	76103743,76103426,76101863,76101376,76098018,76094581	Gene ID= ENSG00000182473.21 TPM= 23.64 Transcript Type= retained_intron
chr17	76265202	76271299	76265202	76271299	+	ENST00000327490.7@UBALD2	ENST00000327490.7	protein_coding	76265202,76265907,76270194	76265625,76265969,76271299	Gene ID= ENSG00000185262.8 TPM= 25.69 Transcript Type= protein_coding
chr17	76309486	76354149	76309486	76354149	-	ENST00000446526.7@PRPSAP1	ENST00000446526.7	protein_coding	76353534,76348529,76344671,76332263,76330551,76330043,76328717,76313821,76312870,76309486	76354149,76348581,76344737,76332435,76330666,76330098,76328862,76313891,76313016,76311700	Gene ID= ENSG00000161542.16 TPM= 5.84 Transcript Type= protein_coding
chr17	76310934	76353933	76310934	76353933	-	transcript7181.chr17.nic@PRPSAP1	transcript7181.chr17.nic	protein_coding	76353534,76348529,76344671,76332263,76330551,76330043,76328717,76312870,76310934	76353933,76348581,76344737,76332435,76330666,76330098,76328862,76313891,76311700	Gene ID= ENSG00000161542.16 TPM= 4.67 Transcript Type= NA
chr17	76310934	76353933	76310934	76353933	-	transcript7185.chr17.nic@PRPSAP1	transcript7185.chr17.nic	protein_coding	76353534,76348529,76344671,76332263,76330043,76328717,76312870,76310934	76353933,76348581,76344737,76332435,76330666,76328862,76313891,76311700	Gene ID= ENSG00000161542.16 TPM= 4.67 Transcript Type= NA
chr17	76310934	76353933	76310934	76353933	-	transcript7188.chr17.nic@PRPSAP1	transcript7188.chr17.nic	protein_coding	76353534,76348529,76344671,76332263,76328717,76312870,76310934	76353933,76348581,76344737,76332435,76330666,76313891,76311700	Gene ID= ENSG00000161542.16 TPM= 3.5 Transcript Type= NA
chr17	76383244	76387855	76383244	76387855	+	transcript7190.chr17.nic@SPHK1	transcript7190.chr17.nic	protein_coding	76383244,76385451,76385985,76386221,76386393,76386806	76383529,76385654,76386137,76386315,76386508,76387855	Gene ID= ENSG00000176170.13 TPM= 2.34 Transcript Type= NA
chr17	76384631	76387855	76384631	76387855	+	transcript7194.chr17.nic@SPHK1	transcript7194.chr17.nic	protein_coding	76384631,76385451,76386221,76386393,76386806	76384806,76386137,76386315,76386508,76387855	Gene ID= ENSG00000176170.13 TPM= 3.5 Transcript Type= NA
chr17	76384612	76387855	76384612	76387855	+	transcript7195.chr17.nic@SPHK1	transcript7195.chr17.nic	protein_coding	76384612,76385451,76386221,76386393,76386806	76385169,76386137,76386315,76386508,76387855	Gene ID= ENSG00000176170.13 TPM= 4.67 Transcript Type= NA
chr17	76385292	76387857	76385292	76387857	+	ENST00000392496.3@SPHK1	ENST00000392496.3	protein_coding	76385292,76385985,76386221,76386393,76386806	76385654,76386137,76386315,76386508,76387857	Gene ID= ENSG00000176170.13 TPM= 2.34 Transcript Type= protein_coding
chr17	76383245	76387855	76383245	76387855	+	transcript7199.chr17.nic@SPHK1	transcript7199.chr17.nic	protein_coding	76383245,76386221,76386806	76386137,76386508,76387855	Gene ID= ENSG00000176170.13 TPM= 3.5 Transcript Type= NA
chr17	76384609	76387860	76384609	76387860	+	ENST00000592299.5@SPHK1	ENST00000592299.5	protein_coding	76384609,76385451,76385985,76386221,76386393,76386806	76384806,76385654,76386137,76386315,76386508,76387860	Gene ID= ENSG00000176170.13 TPM= 15.18 Transcript Type= protein_coding
chr17	76384650	76387855	76384650	76387855	+	ENST00000323374.8@SPHK1	ENST00000323374.8	protein_coding	76384650,76385451,76385985,76386221,76386393,76386806	76385169,76385654,76386137,76386315,76386508,76387855	Gene ID= ENSG00000176170.13 TPM= 2.34 Transcript Type= protein_coding
chr17	76389451	76453206	76389451	76453206	-	ENST00000319380.11@UBE2O	ENST00000319380.11	protein_coding	76452725,76405513,76405206,76402602,76402064,76401011,76400441,76400147,76399449,76398837,76398472,76398255,76397799,76396128,76395725,76391910,76391756,76389451	76453206,76405572,76405316,76402699,76402127,76401154,76400550,76400297,76399921,76398991,76398584,76398383,76397888,76396821,76395861,76392113,76391813,76391613	Gene ID= ENSG00000175931.12 TPM= 9.73 Transcript Type= protein_coding
chr17	76389532	76453210	76389532	76453210	-	transcript7201.chr17.nic@UBE2O	transcript7201.chr17.nic	protein_coding	76452725,76405513,76405206,76402602,76402064,76401011,76400441,76400222,76399449,76398837,76398472,76398255,76397799,76396128,76395725,76391910,76391756,76389532	76453210,76405572,76405316,76402699,76402127,76401154,76400550,76400297,76399921,76398991,76398584,76398383,76397888,76396821,76395861,76392113,76391813,76391613	Gene ID= ENSG00000175931.12 TPM= 3.89 Transcript Type= NA
chr17	76395358	76453210	76395358	76453210	-	transcript7204.chr17.nnic@UBE2O	transcript7204.chr17.nnic	protein_coding	76452725,76405513,76405206,76402602,76402064,76401011,76400441,76400222,76399449,76398837,76398443,76398255,76397799,76395358	76453210,76405572,76405316,76402699,76402127,76401154,76400550,76400297,76399921,76398991,76398584,76398324,76397891,76396821	Gene ID= ENSG00000175931.12 TPM= 2.72 Transcript Type= NA
chr17	76470896	76501434	76470896	76501434	-	transcript7212.chr17.nic@RHBDF2	transcript7212.chr17.nic	protein_coding	76500936,76487712,76481375,76479733,76479082,76478806,76477657,76477180,76476830,76475030,76474730,76474373,76474033,76473839,76473648,76473252,76473005,76472686,76470896	76501434,76487909,76481545,76479854,76479277,76479009,76477785,76477298,76477024,76475141,76474804,76474534,76474142,76473902,76473742,76473327,76473105,76472839,76472052	Gene ID= ENSG00000129667.12 TPM= 7.01 Transcript Type= NA
chr17	76470896	76501434	76470896	76501434	-	transcript7213.chr17.nic@RHBDF2	transcript7213.chr17.nic	protein_coding	76501353,76487712,76481375,76479733,76479082,76478806,76477657,76477180,76476830,76475030,76474730,76474373,76474033,76473839,76473648,76473252,76473005,76472686,76470896	76501434,76487909,76481545,76479854,76479277,76479009,76477785,76477298,76477024,76475141,76474804,76474534,76474142,76473902,76473742,76473327,76473105,76472839,76472052	Gene ID= ENSG00000129667.12 TPM= 18.68 Transcript Type= NA
chr17	76470896	76501434	76470896	76501434	-	transcript7219.chr17.nic@RHBDF2	transcript7219.chr17.nic	protein_coding	76501353,76487712,76481375,76479733,76479082,76478806,76477657,76477180,76476830,76475030,76474730,76474373,76474033,76473839,76473648,76473005,76472686,76470896	76501434,76487909,76481545,76479854,76479277,76479009,76477785,76477298,76477024,76475141,76474804,76474534,76474142,76473902,76473742,76473327,76472839,76472052	Gene ID= ENSG00000129667.12 TPM= 5.25 Transcript Type= NA
chr17	76470896	76501407	76470896	76501407	-	ENST00000313080.8@RHBDF2	ENST00000313080.8	protein_coding	76501353,76487712,76481375,76479733,76479082,76478806,76477657,76477180,76476830,76475030,76474730,76474373,76474033,76473839,76473648,76473252,76473005,76472686,76470896	76501407,76487909,76481545,76479941,76479277,76479009,76477785,76477298,76477024,76475141,76474804,76474534,76474142,76473902,76473742,76473327,76473105,76472839,76472052	Gene ID= ENSG00000129667.12 TPM= 48.46 Transcript Type= protein_coding
chr17	76496759	76501428	76496759	76501428	-	transcript7220.chr17.nnic@NA	transcript7220.chr17.nnic	NA	76496759	76501428	Gene ID= novel_gene_chr17_7221 TPM= 8.17 Transcript Type= NA
chr17	76527356	76537905	76527356	76537905	-	ENST00000293230.9@CYGB	ENST00000293230.9	protein_coding	76537400,76531460,76530979,76527356	76537905,76531691,76531142,76528611	Gene ID= ENSG00000161544.9 TPM= 37.36 Transcript Type= protein_coding
chr17	76534119	76535759	76534119	76535759	-	transcript7263.chr17.nnic@NA	transcript7263.chr17.nnic	NA	76534119	76535759	Gene ID= novel_gene_chr17_7264 TPM= 2.34 Transcript Type= NA
chr17	76557764	76565343	76557764	76565343	+	transcript7248.chr17.nic@SNHG16	transcript7248.chr17.nic	processed_transcript	76557764,76558945,76561288,76563119	76557857,76559043,76561398,76565343	Gene ID= ENSG00000163597.14 TPM= 65 Transcript Type= NA
chr17	76557769	76565343	76557769	76565343	+	transcript7251.chr17.nnic@SNHG16	transcript7251.chr17.nnic	processed_transcript	76557769,76561288,76563119,76563778	76557857,76561398,76563752,76565343	Gene ID= ENSG00000163597.14 TPM= 32.14 Transcript Type= NA
chr17	76557770	76565343	76557770	76565343	+	ENST00000493536.5@SNHG16	ENST00000493536.5	processed_transcript	76557770,76561288,76563119	76557857,76561398,76565343	Gene ID= ENSG00000163597.14 TPM= 43.63 Transcript Type= lincRNA
chr17	76557792	76565279	76557792	76565279	+	ENST00000590435.5@SNHG16	ENST00000590435.5	processed_transcript	76557792,76558945,76561288,76563119,76563973	76557857,76559043,76561398,76563482,76565279	Gene ID= ENSG00000163597.14 TPM= 3.74 Transcript Type= lincRNA
chr17	76565379	76585850	76565379	76585850	-	transcript7224.chr17.nnic@ST6GALNAC2	transcript7224.chr17.nnic	protein_coding	76585684,76578756,76574365,76573195,76572637,76570787,76570565,76568713,76567453,76565379	76585850,76578816,76574539,76573363,76572775,76570923,76570668,76568796,76567552,76566271	Gene ID= ENSG00000070731.10 TPM= 4.67 Transcript Type= NA
chr17	76565379	76585846	76565379	76585846	-	transcript7232.chr17.nnic@ST6GALNAC2	transcript7232.chr17.nnic	protein_coding	76585684,76578756,76574365,76573195,76572637,76570565,76568713,76567453,76565379	76585846,76578816,76574539,76573363,76572802,76570668,76568796,76567552,76566271	Gene ID= ENSG00000070731.10 TPM= 2.34 Transcript Type= NA
chr17	76565379	76585842	76565379	76585842	-	transcript7235.chr17.nic@ST6GALNAC2	transcript7235.chr17.nic	protein_coding	76585684,76574365,76573195,76572637,76570565,76568713,76567453,76565379	76585842,76574539,76573363,76572775,76570668,76568796,76567552,76566271	Gene ID= ENSG00000070731.10 TPM= 3.5 Transcript Type= NA
chr17	76565379	76586128	76565379	76586128	-	ENST00000225276.9@ST6GALNAC2	ENST00000225276.9	protein_coding	76585684,76578756,76574365,76573195,76572637,76570565,76568713,76567453,76565379	76586128,76578816,76574539,76573363,76572775,76570668,76568796,76567552,76566271	Gene ID= ENSG00000070731.10 TPM= 44.37 Transcript Type= protein_coding
chr17	76584195	76586146	76584195	76586146	-	transcript7261.chr17.nnic@NA	transcript7261.chr17.nnic	NA	76584195	76586146	Gene ID= novel_gene_chr17_7262 TPM= 8.17 Transcript Type= NA
chr17	76624763	76643838	76624763	76643838	-	ENST00000156626.11@ST6GALNAC1	ENST00000156626.11	protein_coding	76643508,76629012,76627415,76627067,76626651,76626289,76626006,76625819,76624763	76643838,76629711,76627583,76627238,76626789,76626392,76626095,76625918,76625527	Gene ID= ENSG00000070526.14 TPM= 13.43 Transcript Type= protein_coding
chr17	76624763	76643693	76624763	76643693	-	ENST00000359088.9@ST6GALNAC1	ENST00000359088.9	protein_coding	76643508,76629012,76627415,76627067,76626651,76626006,76625819,76624763	76643693,76629711,76627583,76627238,76626789,76626095,76625918,76625527	Gene ID= ENSG00000070526.14 TPM= 1.75 Transcript Type= nonsense_mediated_decay
chr17	76679569	76711016	76679569	76711016	-	ENST00000449428.6@MXRA7	ENST00000449428.6	protein_coding	76710605,76688113,76685072,76679569	76711016,76688176,76685165,76680879	Gene ID= ENSG00000182534.13 TPM= 657.74 Transcript Type= protein_coding
chr17	76679569	76711004	76679569	76711004	-	ENST00000375036.6@MXRA7	ENST00000375036.6	protein_coding	76710605,76688113,76685072,76683847,76679569	76711004,76688176,76685165,76683927,76680879	Gene ID= ENSG00000182534.13 TPM= 100.41 Transcript Type= protein_coding
chr17	76718446	76726784	76718446	76726784	-	ENST00000542934.5@JMJD6	ENST00000542934.5	protein_coding	76726347,76725467,76723772,76721798,76721263,76720360,76718446	76726784,76725855,76724058,76721933,76721356,76720498,76718860	Gene ID= ENSG00000070495.14 TPM= 5.84 Transcript Type= nonsense_mediated_decay
chr17	76718453	76726782	76718453	76726782	-	transcript7319.chr17.nic@JMJD6	transcript7319.chr17.nic	protein_coding	76726347,76725467,76723772,76721263,76720360,76718453	76726782,76725855,76724058,76721933,76720498,76718860	Gene ID= ENSG00000070495.14 TPM= 2.34 Transcript Type= NA
chr17	76718451	76726595	76718451	76726595	-	transcript7336.chr17.nnic@JMJD6	transcript7336.chr17.nnic	protein_coding	76726347,76725467,76718451	76726595,76725855,76721933	Gene ID= ENSG00000070495.14 TPM= 2.34 Transcript Type= NA
chr17	76718453	76726590	76718453	76726590	-	ENST00000397625.8@JMJD6	ENST00000397625.8	protein_coding	76726347,76725467,76723772,76721798,76720360,76718453	76726590,76725855,76724058,76721933,76720498,76718860	Gene ID= ENSG00000070495.14 TPM= 35.03 Transcript Type= protein_coding
chr17	76726830	76733879	76726830	76733879	+	ENST00000615984.4@METTL23	ENST00000615984.4	protein_coding	76726830,76729690,76732978,76733293,76733521	76727213,76729794,76733215,76733377,76733879	Gene ID= ENSG00000181038.13 TPM= 5.84 Transcript Type= protein_coding
chr17	76726868	76733936	76726868	76733936	+	ENST00000341249.10@METTL23	ENST00000341249.10	protein_coding	76726868,76729690,76732978,76733293,76733521	76727178,76729794,76733215,76733377,76733936	Gene ID= ENSG00000181038.13 TPM= 1.17 Transcript Type= protein_coding
chr17	76726854	76733878	76726854	76733878	+	ENST00000590964.5@METTL23	ENST00000590964.5	protein_coding	76726854,76732978,76733293,76733521	76727178,76733215,76733377,76733878	Gene ID= ENSG00000181038.13 TPM= 7.01 Transcript Type= protein_coding
chr17	76734147	76737457	76734147	76737457	-	transcript7333.chr17.nic@SRSF2	transcript7333.chr17.nic	protein_coding	76736799,76736154,76735772,76734147	76737457,76736464,76735875,76735158	Gene ID= ENSG00000161547.16 TPM= 16.54 Transcript Type= NA
chr17	76734121	76737332	76734121	76737332	-	transcript7338.chr17.nnic@SRSF2	transcript7338.chr17.nnic	protein_coding	76736799,76735772,76734121	76737332,76736464,76735590	Gene ID= ENSG00000161547.16 TPM= 5.06 Transcript Type= NA
chr17	76734115	76737333	76734115	76737333	-	ENST00000392485.2@SRSF2	ENST00000392485.2	protein_coding	76736799,76734115	76737333,76736464	Gene ID= ENSG00000161547.16 TPM= 27.24 Transcript Type= protein_coding
chr17	76734119	76737374	76734119	76737374	-	ENST00000359995.9@SRSF2	ENST00000359995.9	protein_coding	76736799,76736154,76734119	76737374,76736464,76735158	Gene ID= ENSG00000161547.16 TPM= 69.47 Transcript Type= protein_coding
chr17	76734123	76737308	76734123	76737308	-	ENST00000585202.5@SRSF2	ENST00000585202.5	protein_coding	76736799,76736154,76735061,76734123	76737308,76736464,76735158,76734562	Gene ID= ENSG00000161547.16 TPM= 5.25 Transcript Type= nonsense_mediated_decay
chr17	76734147	76736555	76734147	76736555	-	ENST00000582449.5@SRSF2	ENST00000582449.5	protein_coding	76736154,76735772,76734147	76736555,76735875,76735158	Gene ID= ENSG00000161547.16 TPM= 2.34 Transcript Type= retained_intron
chr17	76735865	76778817	76735865	76778817	+	ENST00000586622.5@MFSD11	ENST00000586622.5	protein_coding	76735865,76736190,76738282,76738938,76740957,76741969,76742177,76743398,76744322,76754047,76767386,76769746,76774997,76776406,76778188	76736028,76737091,76738448,76738993,76741064,76742048,76742273,76743456,76744466,76754087,76767451,76769871,76775171,76776541,76778817	Gene ID= ENSG00000092931.11 TPM= 3.5 Transcript Type= protein_coding
chr17	76736620	76778727	76736620	76778727	+	transcript7297.chr17.nnic@MFSD11	transcript7297.chr17.nnic	protein_coding	76736620,76738282,76738938,76740957,76741969,76742177,76743398,76744322,76754047,76767386,76769746,76774997,76776406,76778188	76737086,76738448,76738993,76741064,76742048,76742273,76743456,76744466,76754087,76767451,76769871,76775171,76776541,76778727	Gene ID= ENSG00000092931.11 TPM= 4.67 Transcript Type= NA
chr17	76738001	76779286	76738001	76779286	+	transcript7312.chr17.nic@MFSD11	transcript7312.chr17.nic	protein_coding	76738001,76738282,76738938,76740957,76741994,76742177,76744322,76754047,76767386,76769746,76774997,76776406,76778188	76738165,76738448,76738993,76741064,76742048,76742273,76744466,76754087,76767451,76769871,76775171,76776541,76779286	Gene ID= ENSG00000092931.11 TPM= 2.92 Transcript Type= NA
chr17	76736853	76738488	76736853	76738488	+	ENST00000591864.1@MFSD11	ENST00000591864.1	protein_coding	76736853,76738282	76737091,76738488	Gene ID= ENSG00000092931.11 TPM= 1.17 Transcript Type= protein_coding
chr17	76738071	76778727	76738071	76778727	+	ENST00000590514.5@MFSD11	ENST00000590514.5	protein_coding	76738071,76738282,76738938,76740957,76741969,76742177,76743398,76744322,76754047,76767386,76769746,76774997,76776406,76778188	76738165,76738448,76738993,76741064,76742048,76742273,76743456,76744466,76754087,76767451,76769871,76775171,76776541,76778727	Gene ID= ENSG00000092931.11 TPM= 5.25 Transcript Type= protein_coding
chr17	76872647	76950382	76872647	76950382	+	ENST00000428789.6@MGAT5B	ENST00000428789.6	protein_coding	76872647,76882151,76902555,76903303,76904252,76905169,76906018,76924966,76926597,76932645,76937988,76940402,76940732,76946376,76947830,76948640	76872963,76882298,76902670,76903376,76904422,76905333,76906187,76925097,76926730,76932775,76938143,76940548,76940848,76946450,76948086,76950382	Gene ID= ENSG00000167889.12 TPM= 1.17 Transcript Type= protein_coding
chr17	76943551	76948898	76943551	76948898	-	transcript7345.chr17.nnic@NA	transcript7345.chr17.nnic	NA	76948722,76943551	76948898,76945118	Gene ID= novel_gene_chr17_7346 TPM= 2.34 Transcript Type= NA
chr17	77088673	77094990	77088673	77094990	+	ENST00000434411.5@SNHG20	ENST00000434411.5	processed_transcript	77088673,77089153,77093244	77088949,77089271,77094990	Gene ID= ENSG00000234912.11 TPM= 19.85 Transcript Type= sense_overlapping
chr17	77140977	77217101	77140977	77217101	+	transcript7349.chr17.nnic@SEC14L1	transcript7349.chr17.nnic	protein_coding	77140977,77142646,77143567,77190803,77191181,77193421,77194677,77196202,77200484,77203570,77205276,77206229,77206728,77209342,77211950,77213314,77213918,77216167,77216414	77141107,77142750,77143659,77190952,77191312,77193549,77194911,77196311,77200673,77203658,77205346,77206400,77206862,77209476,77212201,77213492,77216127,77216387,77217101	Gene ID= ENSG00000129657.14 TPM= 34.83 Transcript Type= NA
chr17	77140992	77217097	77140992	77217097	+	transcript7355.chr17.nnic@SEC14L1	transcript7355.chr17.nnic	protein_coding	77140992,77142646,77143567,77190803,77191181,77193421,77194677,77196202,77200484,77203570,77205276,77206229,77206728,77209342,77211950,77213314,77213918,77216167	77141107,77142750,77143659,77190952,77191312,77193549,77194911,77196311,77200673,77203658,77205346,77206400,77206862,77209476,77212201,77213492,77216127,77217097	Gene ID= ENSG00000129657.14 TPM= 7.97 Transcript Type= NA
chr17	77214651	77217101	77214651	77217101	+	transcript7361.chr17.nnic@SEC14L1	transcript7361.chr17.nnic	protein_coding	77214651,77216115,77216414	77216075,77216387,77217101	Gene ID= ENSG00000129657.14 TPM= 3.5 Transcript Type= NA
chr17	77214651	77217096	77214651	77217096	+	transcript7363.chr17.nnic@SEC14L1	transcript7363.chr17.nnic	protein_coding	77214651,77216115	77216075,77217096	Gene ID= ENSG00000129657.14 TPM= 4.67 Transcript Type= NA
chr17	77141032	77217101	77141032	77217101	+	ENST00000443798.8@SEC14L1	ENST00000443798.8	protein_coding	77141032,77142646,77143567,77190803,77191181,77193421,77194677,77196202,77200484,77203570,77205276,77206229,77206728,77209342,77211950,77213314,77213918,77216549	77141107,77142750,77143659,77190952,77191312,77193549,77194911,77196311,77200673,77203658,77205346,77206400,77206862,77209476,77212201,77213492,77214019,77217101	Gene ID= ENSG00000129657.14 TPM= 14.4 Transcript Type= protein_coding
chr17	77141070	77143860	77141070	77143860	+	ENST00000588696.5@SEC14L1	ENST00000588696.5	protein_coding	77141070,77142646,77143567	77141107,77142750,77143860	Gene ID= ENSG00000129657.14 TPM= 1.17 Transcript Type= retained_intron
chr17	77162772	77165227	77162772	77165227	-	transcript7364.chr17.nnic@NA	transcript7364.chr17.nnic	NA	77162772	77165227	Gene ID= novel_gene_chr17_7365 TPM= 2.34 Transcript Type= NA
chr17	77281410	77500592	77281410	77500592	+	ENST00000427177.5@SEPT9	ENST00000427177.5	protein_coding	77281410,77307141,77402059,77482144,77487424,77488240,77488727,77490742,77492621,77492980,77497315,77498523	77281554,77307197,77402703,77482335,77487552,77488321,77488864,77490859,77492716,77493076,77497366,77500592	Gene ID= ENSG00000184640.17 TPM= 57.21 Transcript Type= protein_coding
chr17	77319515	77500592	77319515	77500592	+	ENST00000329047.12@SEPT9	ENST00000329047.12	protein_coding	77319515,77402059,77482144,77487424,77488240,77488727,77490742,77492621,77492980,77497315,77498523	77320348,77402703,77482335,77487552,77488321,77488864,77490859,77492716,77493076,77497366,77500592	Gene ID= ENSG00000184640.17 TPM= 65.39 Transcript Type= protein_coding
chr17	77373190	77500594	77373190	77500594	+	ENST00000423034.6@SEPT9	ENST00000423034.6	protein_coding	77373190,77402059,77482144,77487424,77488240,77488727,77490742,77492621,77492980,77497315,77498523	77373552,77402703,77482335,77487552,77488321,77488864,77490859,77492716,77493076,77497366,77500594	Gene ID= ENSG00000184640.17 TPM= 56.04 Transcript Type= protein_coding
chr17	77316687	77319475	77316687	77319475	-	transcript7382.chr17.nnic@NA	transcript7382.chr17.nnic	NA	77316687	77319475	Gene ID= novel_gene_chr17_7383 TPM= 2.34 Transcript Type= NA
chr17	77415571	77420892	77415571	77420892	-	transcript7384.chr17.nnic@NA	transcript7384.chr17.nnic	NA	77415571	77420892	Gene ID= novel_gene_chr17_7385 TPM= 3.5 Transcript Type= NA
chr17	78108782	78112255	78108782	78112255	-	transcript7471.chr17.nnic@NA	transcript7471.chr17.nnic	NA	78108782	78112255	Gene ID= novel_gene_chr17_7472 TPM= 18.68 Transcript Type= NA
chr17	78112919	78128809	78112919	78128809	-	transcript7393.chr17.nnic@TMC6	transcript7393.chr17.nnic	protein_coding	78128612,78126777,78126524,78126277,78125726,78125158,78124889,78124524,78123989,78122605,78121556,78121013,78120653,78119297,78118971,78117802,78117468,78117269,78113548,78112919	78128809,78126906,78126648,78126366,78125884,78125263,78124985,78124655,78124179,78122749,78121711,78121164,78120832,78119392,78119046,78117935,78117644,78117347,78113624,78113211	Gene ID= ENSG00000141524.15 TPM= 9.89 Transcript Type= NA
chr17	78112919	78128798	78112919	78128798	-	transcript7398.chr17.nic@TMC6	transcript7398.chr17.nic	protein_coding	78128659,78126777,78126524,78126277,78125726,78125158,78124889,78124524,78123989,78122605,78121556,78121013,78120653,78119297,78118971,78117802,78117468,78117269,78113548,78112919	78128798,78126906,78126648,78126366,78125884,78125263,78124985,78124781,78124179,78122749,78121711,78121164,78120832,78119392,78119046,78117935,78117644,78117347,78113624,78113211	Gene ID= ENSG00000141524.15 TPM= 53.52 Transcript Type= NA
chr17	78112919	78128809	78112919	78128809	-	transcript7421.chr17.nic@TMC6	transcript7421.chr17.nic	protein_coding	78128612,78126777,78126524,78126277,78125726,78125158,78124889,78124524,78123989,78122605,78121556,78121013,78119297,78118971,78117802,78117468,78117269,78113548,78112919	78128809,78126906,78126648,78126366,78125884,78125263,78124985,78124781,78124179,78122749,78121711,78121164,78119392,78119046,78117935,78117644,78117347,78113624,78113211	Gene ID= ENSG00000141524.15 TPM= 29.01 Transcript Type= NA
chr17	78112921	78132407	78112921	78132407	-	ENST00000322914.7@TMC6	ENST00000322914.7	protein_coding	78132341,78126777,78126524,78126277,78125726,78125158,78124889,78124524,78123989,78122605,78121556,78121013,78120653,78119297,78118971,78117802,78117468,78117269,78113548,78112921	78132407,78126906,78126648,78126366,78125884,78125263,78124985,78124781,78124179,78122749,78121711,78121164,78120832,78119392,78119046,78117935,78117644,78117347,78113624,78113211	Gene ID= ENSG00000141524.15 TPM= 25.21 Transcript Type= protein_coding
chr17	78130760	78139753	78130760	78139753	+	transcript7446.chr17.nic@TMC8	transcript7446.chr17.nic	protein_coding	78130760,78131281,78131882,78132359,78132788,78133406,78133853,78134394,78134870,78137235,78137717,78138005,78138349,78138574	78130851,78131737,78132030,78132508,78132870,78133542,78134000,78134564,78135009,78137358,78137814,78138188,78138479,78139753	Gene ID= ENSG00000167895.14 TPM= 3.5 Transcript Type= NA
chr17	78130786	78142968	78130786	78142968	+	ENST00000318430.9@TMC8	ENST00000318430.9	protein_coding	78130786,78131281,78131882,78132359,78132788,78133406,78133853,78134394,78134870,78137235,78137717,78138005,78138349,78138574,78139162,78140834	78130851,78131737,78132030,78132508,78132870,78133542,78134000,78134564,78135009,78137358,78137814,78138188,78138479,78138732,78139240,78142968	Gene ID= ENSG00000167895.14 TPM= 26.85 Transcript Type= protein_coding
chr17	78168558	78173527	78168558	78173527	+	ENST00000225777.7@SYNGR2	ENST00000225777.7	protein_coding	78168558,78170817,78171510,78171739	78168715,78171054,78171649,78173527	Gene ID= ENSG00000108639.7 TPM= 15.56 Transcript Type= protein_coding
chr17	78168611	78172719	78168611	78172719	+	ENST00000588282.5@SYNGR2	ENST00000588282.5	protein_coding	78168611,78170817,78171510	78168715,78171054,78172719	Gene ID= ENSG00000108639.7 TPM= 40.67 Transcript Type= protein_coding
chr17	78168594	78172726	78168594	78172726	+	transcript7499.chr17.nnic@NA	transcript7499.chr17.nnic	NA	78168594	78172726	Gene ID= novel_gene_chr17_7500 TPM= 5.84 Transcript Type= NA
chr17	78174075	78187233	78174075	78187233	-	ENST00000301634.11@TK1	ENST00000301634.11	protein_coding	78186929,78186787,78185055,78182589,78175529,78175050,78174075	78187233,78186818,78185165,78182682,78175618,78175169,78174950	Gene ID= ENSG00000167900.11 TPM= 11.68 Transcript Type= protein_coding
chr17	78187317	78207701	78187317	78207701	+	ENST00000409257.9@AFMID	ENST00000409257.9	protein_coding	78187317,78190970,78202499,78202703,78204656,78204828,78205093,78205440,78205603,78205946,78206911	78187433,78191060,78202603,78202751,78204741,78204900,78205190,78205518,78205738,78206050,78207701	Gene ID= ENSG00000183077.15 TPM= 12.84 Transcript Type= protein_coding
chr17	78187329	78207701	78187329	78207701	+	transcript7480.chr17.nic@AFMID	transcript7480.chr17.nic	protein_coding	78187329,78190970,78202499,78202703,78205946,78206911	78187433,78191060,78202603,78202751,78206050,78207701	Gene ID= ENSG00000183077.15 TPM= 7.01 Transcript Type= NA
chr17	78187362	78207701	78187362	78207701	+	ENST00000327898.9@AFMID	ENST00000327898.9	protein_coding	78187362,78190970,78202499,78202703,78204656,78204828,78205093,78205440,78205603,78205946,78206911	78187433,78191060,78202603,78202751,78204741,78204900,78205190,78205518,78205753,78206050,78207701	Gene ID= ENSG00000183077.15 TPM= 4.67 Transcript Type= protein_coding
chr17	78214198	78225636	78214198	78225636	+	ENST00000350051.7@BIRC5	ENST00000350051.7	protein_coding	78214198,78214680,78216664,78223465	78214427,78214789,78216781,78225636	Gene ID= ENSG00000089685.14 TPM= 1.17 Transcript Type= protein_coding
chr17	78254941	78258003	78254941	78258003	-	transcript7503.chr17.nnic@NA	transcript7503.chr17.nnic	NA	78254941	78258003	Gene ID= novel_gene_chr17_7504 TPM= 2.34 Transcript Type= NA
chr17	78356778	78360077	78356778	78360077	-	ENST00000330871.3@SOCS3	ENST00000330871.3	protein_coding	78359750,78356778	78360077,78359183	Gene ID= ENSG00000184557.4 TPM= 729.75 Transcript Type= protein_coding
chr17	78378637	78424659	78378637	78424659	+	transcript7515.chr17.nnic@PGS1	transcript7515.chr17.nnic	protein_coding	78378637,78392476,78396308,78398252,78399348,78400677,78403568,78414879,78419546,78420214,78424061	78378808,78392665,78396385,78398351,78399537,78400855,78404089,78415027,78419675,78420323,78424659	Gene ID= ENSG00000087157.18 TPM= 4.67 Transcript Type= NA
chr17	78378637	78424559	78378637	78424559	+	transcript7517.chr17.nnic@PGS1	transcript7517.chr17.nnic	protein_coding	78378637,78392476,78396308,78398252,78399348,78400677,78403568,78414952,78419546,78420214,78424061	78378808,78392665,78396385,78398351,78399537,78400855,78404089,78415027,78419675,78420323,78424559	Gene ID= ENSG00000087157.18 TPM= 4.67 Transcript Type= NA
chr17	78378639	78424554	78378639	78424554	+	transcript7520.chr17.nic@PGS1	transcript7520.chr17.nic	protein_coding	78378639,78382664,78392476,78396308,78398252,78399348,78400677,78403568,78414879,78419546,78424061	78378808,78382785,78392665,78396385,78398351,78399537,78400855,78404089,78415027,78419675,78424554	Gene ID= ENSG00000087157.18 TPM= 4.67 Transcript Type= NA
chr17	78378640	78424554	78378640	78424554	+	ENST00000262764.10@PGS1	ENST00000262764.10	protein_coding	78378640,78392476,78396308,78398252,78399348,78400677,78403568,78414879,78419546,78424061	78378808,78392665,78396385,78398351,78399537,78400855,78404089,78415027,78419675,78424554	Gene ID= ENSG00000087157.18 TPM= 42.03 Transcript Type= protein_coding
chr17	78378637	78424659	78378637	78424659	+	transcript7534.chr17.nic@PGS1	transcript7534.chr17.nic	protein_coding	78378637,78392476,78396308,78398252,78399348,78400677,78403568,78414952,78419546,78424061	78378808,78392665,78396385,78398351,78399537,78400855,78404089,78415027,78419675,78424659	Gene ID= ENSG00000087157.18 TPM= 7.01 Transcript Type= NA
chr17	78378637	78424659	78378637	78424659	+	transcript7536.chr17.nic@PGS1	transcript7536.chr17.nic	protein_coding	78378637,78392476,78396308,78398252,78399348,78400677,78403568,78414952,78419546,78424061	78378808,78392665,78396385,78398351,78399537,78400855,78404089,78415027,78419725,78424659	Gene ID= ENSG00000087157.18 TPM= 7.01 Transcript Type= NA
chr17	78378637	78423119	78378637	78423119	+	transcript7548.chr17.nic@PGS1	transcript7548.chr17.nic	protein_coding	78378637,78392476,78396308,78398252,78399348,78400677,78403568,78414952,78419546	78378808,78392665,78396385,78398351,78399537,78400855,78404089,78415027,78423119	Gene ID= ENSG00000087157.18 TPM= 10.51 Transcript Type= NA
chr17	78674048	78782331	78674048	78782331	-	transcript7580.chr17.nic@CYTH1	transcript7580.chr17.nic	protein_coding	78782202,78709650,78708197,78702538,78702122,78701671,78700331,78698820,78698269,78692417,78680971,78680190,78676995,78674048	78782331,78709732,78708261,78702604,78702240,78701751,78700443,78698968,78698380,78692493,78681042,78680344,78677050,78676169	Gene ID= ENSG00000108669.16 TPM= 13.72 Transcript Type= NA
chr17	78674048	78736894	78674048	78736894	-	transcript7582.chr17.nic@CYTH1	transcript7582.chr17.nic	protein_coding	78736692,78709650,78708197,78702538,78702122,78701671,78700331,78698820,78698269,78692417,78680971,78680190,78674048	78736894,78709732,78708261,78702604,78702240,78701751,78700443,78698968,78698380,78692493,78681042,78680344,78676169	Gene ID= ENSG00000108669.16 TPM= 15.47 Transcript Type= NA
chr17	78674049	78678471	78674049	78678471	-	ENST00000586299.1@CYTH1	ENST00000586299.1	protein_coding	78674049	78678471	Gene ID= ENSG00000108669.16 TPM= 19.56 Transcript Type= retained_intron
chr17	78674048	78782272	78674048	78782272	-	ENST00000591455.5@CYTH1	ENST00000591455.5	protein_coding	78782202,78709650,78708197,78702538,78702122,78701671,78700331,78698820,78698269,78692417,78680971,78680190,78674048	78782272,78709732,78708261,78702604,78702240,78701751,78700443,78698968,78698380,78692493,78681042,78680344,78676169	Gene ID= ENSG00000108669.16 TPM= 31.82 Transcript Type= protein_coding
chr17	78695986	78697342	78695986	78697342	+	transcript7590.chr17.nnic@NA	transcript7590.chr17.nnic	NA	78695986	78697342	Gene ID= novel_gene_chr17_7591 TPM= 15.18 Transcript Type= NA
chr17	78764740	78766107	78764740	78766107	+	transcript7592.chr17.nnic@NA	transcript7592.chr17.nnic	NA	78764740	78766107	Gene ID= novel_gene_chr17_7593 TPM= 5.84 Transcript Type= NA
chr17	78776902	78778659	78776902	78778659	+	transcript7594.chr17.nnic@NA	transcript7594.chr17.nnic	NA	78776902	78778659	Gene ID= novel_gene_chr17_7595 TPM= 10.51 Transcript Type= NA
chr17	78852977	78925387	78852977	78925387	-	ENST00000262768.11@TIMP2	ENST00000262768.11	protein_coding	78924959,78873819,78870898,78857522,78852977	78925387,78873919,78871006,78857646,78855864	Gene ID= ENSG00000035862.12 TPM= 171.64 Transcript Type= protein_coding
chr17	78868758	78870422	78868758	78870422	+	transcript7606.chr17.nnic@NA	transcript7606.chr17.nnic	NA	78868758	78870422	Gene ID= novel_gene_chr17_7607 TPM= 2.34 Transcript Type= NA
chr17	78971238	78980109	78971238	78980109	-	ENST00000262776.7@LGALS3BP	ENST00000262776.7	protein_coding	78979824,78977140,78975965,78974688,78972970,78971238	78980109,78977214,78976156,78974819,78973222,78972704	Gene ID= ENSG00000108679.12 TPM= 670.88 Transcript Type= protein_coding
chr17	78991717	79009792	78991717	79009792	-	transcript7623.chr17.nic@CANT1	transcript7623.chr17.nic	protein_coding	79009664,79000100,78997840,78996992,78995018,78991717	79009792,79000270,78997963,78997644,78995221,78993920	Gene ID= ENSG00000171302.16 TPM= 12.06 Transcript Type= NA
chr17	78991717	79009817	78991717	79009817	-	ENST00000302345.6@CANT1	ENST00000302345.6	protein_coding	79009664,78996992,78995018,78991717	79009817,78997963,78995221,78993920	Gene ID= ENSG00000171302.16 TPM= 15.56 Transcript Type= protein_coding
chr17	78991717	79009730	78991717	79009730	-	ENST00000392446.9@CANT1	ENST00000392446.9	protein_coding	79009664,78997840,78996992,78995018,78991717	79009730,78997963,78997644,78995221,78993920	Gene ID= ENSG00000171302.16 TPM= 27.24 Transcript Type= protein_coding
chr17	79024171	79049787	79024171	79049787	+	ENST00000339142.6@C1QTNF1	ENST00000339142.6	protein_coding	79024171,79034317,79043955,79046555,79047538	79024494,79034533,79044123,79046694,79049787	Gene ID= ENSG00000173918.14 TPM= 9.34 Transcript Type= protein_coding
chr17	79024070	79048475	79024070	79048475	+	ENST00000579760.5@C1QTNF1	ENST00000579760.5	protein_coding	79024070,79043955,79046555,79047538	79024494,79044123,79046694,79048475	Gene ID= ENSG00000173918.14 TPM= 4.67 Transcript Type= protein_coding
chr17	79024261	79049787	79024261	79049787	+	ENST00000311661.4@C1QTNF1	ENST00000311661.4	protein_coding	79024261,79046555,79047538	79024494,79046694,79049787	Gene ID= ENSG00000173918.14 TPM= 9.34 Transcript Type= protein_coding
chr17	79074916	79088592	79074916	79088592	+	transcript7640.chr17.nic@ENGASE	transcript7640.chr17.nic	protein_coding	79074916,79077430,79077663,79079489,79080207,79080925,79081898,79083020,79083482,79083761,79084538,79085234,79085620	79075090,79077497,79077864,79079637,79080364,79081073,79082063,79083123,79083590,79083951,79084686,79085342,79088592	Gene ID= ENSG00000167280.16 TPM= 39.7 Transcript Type= NA
chr17	79074945	79086696	79074945	79086696	+	ENST00000579016.5@ENGASE	ENST00000579016.5	protein_coding	79074945,79077430,79077663,79079489,79080207,79080925,79081898,79083020,79083482,79083761,79084538,79085234,79085620,79085933	79075090,79077497,79077864,79079637,79080364,79081073,79082063,79083123,79083590,79083951,79084686,79085342,79085734,79086696	Gene ID= ENSG00000167280.16 TPM= 14.01 Transcript Type= protein_coding
chr17	79088625	79091970	79088625	79091970	+	transcript7645.chr17.nnic@NA	transcript7645.chr17.nnic	NA	79088625	79091970	Gene ID= novel_gene_chr17_7646 TPM= 2.34 Transcript Type= NA
chr17	79778132	79787983	79778132	79787983	+	ENST00000310942.8@CBX2	ENST00000310942.8	protein_coding	79778132,79778384,79779362,79781696,79783732	79778307,79778427,79779427,79781801,79787983	Gene ID= ENSG00000173894.10 TPM= 5.84 Transcript Type= protein_coding
chr17	79833156	79839429	79833156	79839429	-	ENST00000269397.8@CBX4	ENST00000269397.8	protein_coding	79839183,79839011,79837837,79835646,79833156	79839429,79839054,79837902,79835712,79835395	Gene ID= ENSG00000141582.14 TPM= 38.53 Transcript Type= protein_coding
chr17	79834597	79837948	79834597	79837948	+	transcript7663.chr17.nnic@NA	transcript7663.chr17.nnic	NA	79834597	79837948	Gene ID= novel_gene_chr17_7664 TPM= 2.34 Transcript Type= NA
chr17	80036639	80059507	80036639	80059507	+	transcript7672.chr17.nic@CCDC40	transcript7672.chr17.nic	protein_coding	80036639,80038123,80039812,80047279,80048583,80049906,80050064,80058494,80058858	80036691,80038186,80040270,80047402,80048761,80049989,80050283,80058651,80059507	Gene ID= ENSG00000141519.14 TPM= 2.34 Transcript Type= NA
chr17	80101561	80119877	80101561	80119877	+	transcript7677.chr17.nic@GAA	transcript7677.chr17.nic	protein_coding	80101561,80101811,80104555,80105749,80107557,80107800,80108290,80108489,80108697,80109945,80110727,80110941,80111983,80112578,80112876,80113218,80116968,80117600,80118193,80118653,80119272	80101625,80101925,80105132,80105894,80107722,80107896,80108409,80108607,80108828,80110055,80110840,80111025,80112100,80112711,80113027,80113366,80117109,80117749,80118357,80118805,80119877	Gene ID= ENSG00000171298.12 TPM= 65.03 Transcript Type= NA
chr17	80101522	80119877	80101522	80119877	+	transcript7684.chr17.nic@GAA	transcript7684.chr17.nic	protein_coding	80101522,80104555,80105749,80107557,80107800,80108290,80108489,80108697,80109945,80110727,80110941,80111983,80112578,80112876,80113218,80116968,80117600,80118193,80118653,80119272	80101625,80105132,80105894,80107722,80107896,80108409,80108607,80108828,80110055,80110840,80111025,80112100,80112711,80113027,80113366,80117109,80117749,80118357,80118805,80119877	Gene ID= ENSG00000171298.12 TPM= 145.6 Transcript Type= NA
chr17	80101594	80119877	80101594	80119877	+	ENST00000390015.7@GAA	ENST00000390015.7	protein_coding	80101594,80101811,80104555,80105749,80107557,80107800,80108290,80108489,80108697,80109945,80110727,80110941,80111983,80112578,80112876,80113218,80116968,80117600,80118193,80118653,80119272	80101625,80101890,80105132,80105894,80107722,80107896,80108409,80108607,80108828,80110055,80110840,80111025,80112100,80112711,80113027,80113366,80117109,80117749,80118357,80118805,80119877	Gene ID= ENSG00000171298.12 TPM= 203.78 Transcript Type= protein_coding
chr17	80101597	80102733	80101597	80102733	+	ENST00000574376.1@GAA	ENST00000574376.1	protein_coding	80101597,80101811	80101625,80102733	Gene ID= ENSG00000171298.12 TPM= 3.5 Transcript Type= processed_transcript
chr17	80135264	80147203	80135264	80147203	-	transcript7698.chr17.nic@EIF4A3	transcript7698.chr17.nic	protein_coding	80146793,80144172,80141319,80140008,80139670,80139021,80138142,80137386,80136228,80136004,80135264	80147203,80144244,80141848,80140140,80139750,80139162,80138280,80137501,80136335,80136131,80135506	Gene ID= ENSG00000141543.9 TPM= 2.92 Transcript Type= NA
chr17	80135214	80147183	80135214	80147183	-	ENST00000269349.7@EIF4A3	ENST00000269349.7	protein_coding	80146793,80144172,80141782,80141319,80140008,80139670,80139021,80138142,80137386,80136228,80136004,80135214	80147183,80144244,80141848,80141381,80140140,80139750,80139162,80138280,80137501,80136335,80136131,80135506	Gene ID= ENSG00000141543.9 TPM= 102.16 Transcript Type= protein_coding
chr17	80200673	80206442	80200673	80206442	-	transcript7734.chr17.nic@AC087741.1	transcript7734.chr17.nic	antisense_RNA	80205333,80203778,80200673	80206442,80203965,80201849	Gene ID= ENSG00000262580.5 TPM= 9.34 Transcript Type= NA
chr17	80209290	80220383	80209290	80220383	-	transcript7716.chr17.nic@SGSH	transcript7716.chr17.nic	protein_coding	80220226,80217032,80215033,80214615,80214172,80213804,80212071,80211869,80209290	80220383,80217192,80215138,80214765,80214328,80213885,80212274,80211923,80211011	Gene ID= ENSG00000181523.12 TPM= 4.26 Transcript Type= NA
chr17	80209264	80220400	80209264	80220400	-	ENST00000326317.10@SGSH	ENST00000326317.10	protein_coding	80220226,80217032,80215033,80214615,80214172,80213804,80212071,80209264	80220400,80217192,80215138,80214765,80214328,80213885,80212274,80211011	Gene ID= ENSG00000181523.12 TPM= 76.65 Transcript Type= protein_coding
chr17	80209290	80220383	80209290	80220383	-	transcript7721.chr17.nic@SGSH	transcript7721.chr17.nic	protein_coding	80220226,80217032,80215033,80214615,80214172,80213804,80212071,80209290	80220383,80217192,80215138,80214765,80214328,80213885,80212274,80211923	Gene ID= ENSG00000181523.12 TPM= 6.6 Transcript Type= NA
chr17	80209290	80220383	80209290	80220383	-	transcript7724.chr17.nic@SGSH	transcript7724.chr17.nic	protein_coding	80220226,80217032,80215033,80214615,80214172,80213804,80209290	80220383,80217192,80215138,80214765,80214328,80213885,80212274	Gene ID= ENSG00000181523.12 TPM= 23.04 Transcript Type= NA
chr17	80209290	80220383	80209290	80220383	-	transcript7732.chr17.nic@SGSH	transcript7732.chr17.nic	protein_coding	80220226,80217032,80213804,80209290	80220383,80217192,80215138,80212274	Gene ID= ENSG00000181523.12 TPM= 6.81 Transcript Type= NA
chr17	80219736	80253500	80219736	80253500	+	transcript7706.chr17.nic@SLC26A11	transcript7706.chr17.nic	protein_coding	80219736,80220916,80221548,80222655,80223180,80225837,80227818,80236928,80237522,80241771,80245196,80246154,80246509,80248130,80248575,80249154,80251329,80252625	80220496,80221115,80221794,80222847,80223337,80225916,80227960,80237103,80237594,80241821,80245256,80246209,80246649,80248257,80248674,80249287,80251401,80253500	Gene ID= ENSG00000181045.14 TPM= 59.55 Transcript Type= NA
chr17	80260866	80395312	80260866	80395312	+	ENST00000508628.6@RNF213	ENST00000508628.6	protein_coding	80260866,80263574,80273241,80278764,80287815,80288633,80289659,80290570,80291628,80294720,80295557,80298321,80306252,80307128,80309018,80313012,80317188,80319190,80325030,80327816,80328328,80332006,80334105,80336161,80337586,80337833,80339201,80343132,80343857,80344678,80349770,80350301,80351685,80352940,80353512,80354019,80354441,80358288,80360061,80361734,80363102,80363609,80364433,80367748,80367961,80369502,80369768,80371874,80372521,80372975,80374458,80375760,80376301,80376882,80377762,80379620,80380831,80381547,80382979,80383677,80385039,80385538,80386250,80386690,80388612,80389173,80389828,80390012,80393345	80260902,80263778,80273404,80278910,80288363,80288755,80289837,80290728,80291827,80295003,80295813,80298518,80306468,80307201,80309171,80313167,80317277,80319312,80325198,80327989,80328477,80332631,80334270,80336378,80337726,80337997,80340356,80343325,80344015,80348286,80349906,80350396,80351803,80353059,80353666,80354166,80354576,80358479,80360206,80361888,80363314,80363790,80364553,80367848,80368143,80369671,80369867,80371985,80372734,80373165,80374589,80375870,80376543,80376963,80377796,80379714,80380987,80381727,80383070,80383928,80385171,80385621,80386430,80386891,80388689,80389367,80389917,80390196,80395312	Gene ID= ENSG00000173821.19 TPM= 109.75 Transcript Type= protein_coding
chr17	80285676	80287635	80285676	80287635	-	transcript7749.chr17.nnic@NA	transcript7749.chr17.nnic	NA	80285676	80287635	Gene ID= novel_gene_chr17_7750 TPM= 3.5 Transcript Type= NA
chr17	80415443	80438086	80415443	80438086	+	transcript7756.chr17.nic@ENDOV	transcript7756.chr17.nic	protein_coding	80415443,80415650,80422206,80423520,80425032,80425492,80428596,80429773,80436133	80415518,80415821,80422245,80423632,80425100,80425620,80428660,80429831,80438086	Gene ID= ENSG00000173818.16 TPM= 5.35 Transcript Type= NA
chr17	80415152	80438086	80415152	80438086	+	transcript7757.chr17.nnic@ENDOV	transcript7757.chr17.nnic	protein_coding	80415152,80415650,80422206,80423520,80425032,80425492,80429773,80436133	80415250,80415821,80422245,80423632,80425100,80425620,80429831,80438086	Gene ID= ENSG00000173818.16 TPM= 2.63 Transcript Type= NA
chr17	80415463	80438086	80415463	80438086	+	transcript7758.chr17.nic@ENDOV	transcript7758.chr17.nic	protein_coding	80415463,80422206,80423520,80425032,80425492,80428596,80429773,80436133	80415821,80422245,80423632,80425100,80425620,80428660,80429831,80438086	Gene ID= ENSG00000173818.16 TPM= 4.18 Transcript Type= NA
chr17	80415653	80417145	80415653	80417145	+	ENST00000523165.1@ENDOV	ENST00000523165.1	protein_coding	80415653,80416940	80415821,80417145	Gene ID= ENSG00000173818.16 TPM= 1.17 Transcript Type= processed_transcript
chr17	80415167	80438081	80415167	80438081	+	ENST00000520367.5@ENDOV	ENST00000520367.5	protein_coding	80415167,80415650,80422206,80423520,80425032,80425492,80428596,80429773,80436133	80415250,80415821,80422245,80423632,80425100,80425620,80428660,80429831,80438081	Gene ID= ENSG00000173818.16 TPM= 10.02 Transcript Type= protein_coding
chr17	80415165	80416253	80415165	80416253	+	ENST00000520537.1@ENDOV	ENST00000520537.1	protein_coding	80415165,80415650	80415250,80416253	Gene ID= ENSG00000173818.16 TPM= 2.34 Transcript Type= retained_intron
chr17	80416137	80418064	80416137	80418064	-	transcript7763.chr17.nnic@NA	transcript7763.chr17.nnic	NA	80416137	80418064	Gene ID= novel_gene_chr17_7764 TPM= 2.34 Transcript Type= NA
chr17	80467148	80476604	80467148	80476604	-	ENST00000306773.4@NPTX1	ENST00000306773.4	protein_coding	80476003,80475511,80473200,80471732,80467148	80476604,80475718,80473444,80471911,80471034	Gene ID= ENSG00000171246.5 TPM= 2.34 Transcript Type= protein_coding
chr17	80644309	80646946	80644309	80646946	-	transcript7769.chr17.nnic@NA	transcript7769.chr17.nnic	NA	80644309	80646946	Gene ID= novel_gene_chr17_7770 TPM= 2.34 Transcript Type= NA
chr17	80711746	80714348	80711746	80714348	-	transcript7767.chr17.nnic@NA	transcript7767.chr17.nnic	NA	80711746	80714348	Gene ID= novel_gene_chr17_7768 TPM= 3.5 Transcript Type= NA
chr17	80991841	81000133	80991841	81000133	+	transcript7774.chr17.nic@CHMP6	transcript7774.chr17.nic	protein_coding	80991841,80994581,80995019,80995672,80997007,80997261,80998366	80991981,80994690,80995106,80995758,80997072,80997341,81000133	Gene ID= ENSG00000176108.9 TPM= 3.5 Transcript Type= NA
chr17	80991841	81000133	80991841	81000133	+	ENST00000325167.9@CHMP6	ENST00000325167.9	protein_coding	80991841,80994581,80995019,80995672,80997007,80997261,80998366,80999098	80991981,80994690,80995106,80995758,80997072,80997341,80998420,81000133	Gene ID= ENSG00000176108.9 TPM= 116.76 Transcript Type= protein_coding
chr17	81029131	81034855	81029131	81034855	-	transcript7777.chr17.nnic@BAIAP2-AS1	transcript7777.chr17.nnic	lincRNA	81034565,81031786,81029131	81034855,81033398,81031197	Gene ID= ENSG00000226137.5 TPM= 7.01 Transcript Type= NA
chr17	81029702	81034881	81029702	81034881	-	ENST00000573167.2@BAIAP2-AS1	ENST00000573167.2	lincRNA	81034565,81029702	81034881,81033398	Gene ID= ENSG00000226137.5 TPM= 3.5 Transcript Type= lincRNA
chr17	81029130	81034573	81029130	81034573	-	ENST00000577066.2@BAIAP2-AS1	ENST00000577066.2	lincRNA	81034378,81029130	81034573,81033398	Gene ID= ENSG00000226137.5 TPM= 25.69 Transcript Type= lincRNA
chr17	81035151	81109372	81035151	81109372	+	ENST00000572329.5@BAIAP2	ENST00000572329.5	protein_coding	81035151,81036863,81053668,81057881,81084832,81085654,81086443,81099928,81103502,81103907,81104514,81106078,81106745,81108475,81108968	81035308,81036961,81053743,81057967,81084893,81085715,81086580,81100080,81103723,81104108,81104715,81106146,81106907,81108509,81109372	Gene ID= ENSG00000175866.15 TPM= 1.31 Transcript Type= nonsense_mediated_decay
chr17	81035151	81116225	81035151	81116225	+	ENST00000428708.6@BAIAP2	ENST00000428708.6	protein_coding	81035151,81053668,81057881,81084832,81085654,81086443,81099928,81103502,81103907,81104514,81106078,81106745,81108475,81115770	81035308,81053743,81057967,81084893,81085725,81086580,81100080,81103723,81104108,81104715,81106146,81106907,81108509,81116225	Gene ID= ENSG00000175866.15 TPM= 21.01 Transcript Type= protein_coding
chr17	81035158	81116225	81035158	81116225	+	ENST00000575245.5@BAIAP2	ENST00000575245.5	protein_coding	81035158,81036863,81053668,81057881,81084832,81085654,81086443,81099928,81103502,81103907,81104514,81106078,81106745,81108475,81110914,81115770	81035308,81036961,81053743,81057967,81084893,81085725,81086580,81100080,81103723,81104108,81104715,81106146,81106907,81108509,81110955,81116225	Gene ID= ENSG00000175866.15 TPM= 9.73 Transcript Type= protein_coding
chr17	81035162	81116224	81035162	81116224	+	ENST00000435091.7@BAIAP2	ENST00000435091.7	protein_coding	81035162,81053668,81057881,81084832,81085654,81086443,81099928,81103502,81103907,81104514,81106078,81106745,81108475,81110914,81115770	81035308,81053743,81057967,81084893,81085725,81086580,81100080,81103723,81104108,81104715,81106146,81106907,81108509,81110959,81116224	Gene ID= ENSG00000175866.15 TPM= 35.4 Transcript Type= protein_coding
chr17	81035156	81109387	81035156	81109387	+	ENST00000575712.5@BAIAP2	ENST00000575712.5	protein_coding	81035156,81053668,81057881,81084832,81085654,81086443,81099928,81103502,81103907,81104514,81106078,81106745,81108475	81035308,81053743,81057967,81084893,81085725,81086580,81100080,81103723,81104108,81104715,81106146,81106907,81109387	Gene ID= ENSG00000175866.15 TPM= 7.15 Transcript Type= protein_coding
chr17	81035162	81117432	81035162	81117432	+	ENST00000321300.10@BAIAP2	ENST00000321300.10	protein_coding	81035162,81053668,81057881,81084832,81085654,81086443,81099928,81103502,81103907,81104514,81106078,81106745,81108475,81115770,81116230	81035308,81053743,81057967,81084893,81085725,81086580,81100080,81103723,81104108,81104715,81106146,81106907,81108509,81115817,81117432	Gene ID= ENSG00000175866.15 TPM= 3.64 Transcript Type= protein_coding
chr17	81055576	81059032	81055576	81059032	-	transcript7821.chr17.nnic@NA	transcript7821.chr17.nnic	NA	81055576	81059032	Gene ID= novel_gene_chr17_7822 TPM= 9.34 Transcript Type= NA
chr17	81109259	81110467	81109259	81110467	-	transcript7823.chr17.nnic@NA	transcript7823.chr17.nnic	NA	81109259	81110467	Gene ID= novel_gene_chr17_7824 TPM= 14.01 Transcript Type= NA
chr17	81117295	81132879	81117295	81132879	-	transcript7807.chr17.nic@AATK	transcript7807.chr17.nic	protein_coding	81132656,81131061,81128470,81127792,81127583,81126427,81124930,81124727,81123194,81120201,81119936,81119380,81117295	81132879,81131205,81128549,81127910,81127670,81126560,81125014,81124848,81123343,81122823,81120083,81119580,81118442	Gene ID= ENSG00000181409.11 TPM= 25.89 Transcript Type= NA
chr17	81117295	81121711	81117295	81121711	-	transcript7814.chr17.nnic@AATK	transcript7814.chr17.nnic	protein_coding	81121248,81120201,81119936,81119380,81117295	81121711,81120937,81120083,81119580,81118442	Gene ID= ENSG00000181409.11 TPM= 23.15 Transcript Type= NA
chr17	81117298	81166072	81117298	81166072	-	ENST00000374792.6@AATK	ENST00000374792.6	protein_coding	81165938,81134368,81131061,81128470,81127792,81127583,81126427,81124930,81124727,81123194,81122535,81121248,81120201,81119936,81119380,81117298	81166072,81134501,81131205,81128549,81127910,81127670,81126560,81125014,81124848,81123343,81122823,81122426,81120984,81120083,81119580,81118442	Gene ID= ENSG00000181409.11 TPM= 15.96 Transcript Type= nonsense_mediated_decay
chr17	81117304	81131948	81117304	81131948	-	ENST00000417379.5@AATK	ENST00000417379.5	protein_coding	81131902,81131061,81128470,81127792,81127583,81126427,81124930,81124727,81123194,81120201,81119936,81119380,81117304	81131948,81131205,81128549,81127910,81127670,81126560,81125014,81124848,81123343,81122823,81120083,81119580,81118442	Gene ID= ENSG00000181409.11 TPM= 28.41 Transcript Type= protein_coding
chr17	81189596	81222999	81189596	81222999	-	ENST00000269392.8@CEP131	ENST00000269392.8	protein_coding	81222769,81219880,81208928,81207125,81206744,81203494,81202240,81200329,81199719,81199381,81198877,81198106,81197712,81196930,81196701,81195835,81194870,81193926,81192736,81192476,81192318,81191193,81190907,81190639,81189915,81189596	81222999,81220073,81209022,81207239,81206871,81203607,81202398,81200446,81199835,81199549,81198971,81198297,81197888,81197055,81196826,81195951,81194972,81194127,81192843,81192593,81192392,81191335,81191084,81190802,81189975,81189843	Gene ID= ENSG00000141577.13 TPM= 12.84 Transcript Type= protein_coding
chr17	81228277	81239075	81228277	81239075	-	transcript7858.chr17.nic@TEPSIN	transcript7858.chr17.nic	protein_coding	81237551,81237387,81236980,81236708,81233981,81233638,81233432,81232315,81231847,81231578,81231398,81230544,81228277	81239075,81237459,81237071,81236801,81234048,81233716,81233503,81232518,81232021,81231691,81231476,81230678,81229476	Gene ID= ENSG00000167302.10 TPM= 4.67 Transcript Type= NA
chr17	81228277	81239091	81228277	81239091	-	ENST00000300714.7@TEPSIN	ENST00000300714.7	protein_coding	81238986,81237387,81236980,81236708,81233981,81233638,81233432,81231847,81231578,81231398,81230544,81228277	81239091,81237459,81237071,81236801,81234048,81233716,81233503,81232021,81231691,81231476,81230678,81229476	Gene ID= ENSG00000167302.10 TPM= 4.09 Transcript Type= protein_coding
chr17	81228277	81239075	81228277	81239075	-	transcript7866.chr17.nic@TEPSIN	transcript7866.chr17.nic	protein_coding	81237551,81237387,81236980,81236708,81233981,81233638,81233432,81232315,81231847,81231398,81230544,81228277	81239075,81237459,81237071,81236801,81234048,81233716,81233503,81232518,81232021,81231691,81230678,81229476	Gene ID= ENSG00000167302.10 TPM= 3.12 Transcript Type= NA
chr17	81228277	81239060	81228277	81239060	-	transcript7868.chr17.nic@TEPSIN	transcript7868.chr17.nic	protein_coding	81238986,81237387,81236980,81236708,81233981,81233638,81233432,81232315,81231847,81231398,81230544,81228277	81239060,81237459,81237071,81236801,81234048,81233716,81233503,81232518,81232021,81231691,81230678,81229476	Gene ID= ENSG00000167302.10 TPM= 6.04 Transcript Type= NA
chr17	81228277	81239060	81228277	81239060	-	transcript7874.chr17.nic@TEPSIN	transcript7874.chr17.nic	protein_coding	81236980,81236708,81233981,81233638,81233432,81232315,81231847,81231398,81230544,81228277	81239060,81236801,81234048,81233716,81233503,81232518,81232021,81231691,81230678,81229476	Gene ID= ENSG00000167302.10 TPM= 3.12 Transcript Type= NA
chr17	81228277	81239057	81228277	81239057	-	transcript7875.chr17.nic@TEPSIN	transcript7875.chr17.nic	protein_coding	81237387,81236980,81236708,81233981,81233638,81233432,81231847,81231398,81230544,81228277	81239057,81237071,81236801,81234048,81233716,81233503,81232021,81231691,81230678,81229476	Gene ID= ENSG00000167302.10 TPM= 2.34 Transcript Type= NA
chr17	81239239	81241281	81239239	81241281	+	ENST00000431388.2@NDUFAF8	ENST00000431388.2	protein_coding	81239239,81239568,81240987	81239447,81239678,81241281	Gene ID= ENSG00000224877.3 TPM= 21.02 Transcript Type= protein_coding
chr17	81245000	81295307	81245000	81295307	-	transcript7837.chr17.nic@SLC38A10	transcript7837.chr17.nic	protein_coding	81294823,81289691,81284850,81283409,81282189,81280609,81277031,81275969,81272516,81270918,81260238,81253073,81252195,81251493,81250070,81246885,81245000	81295307,81289808,81284895,81283502,81282332,81280733,81277133,81276151,81272627,81271024,81260394,81253240,81252683,81251612,81250093,81247061,81246673	Gene ID= ENSG00000157637.12 TPM= 23.85 Transcript Type= NA
chr17	81245000	81295305	81245000	81295305	-	ENST00000374759.7@SLC38A10	ENST00000374759.7	protein_coding	81294823,81289691,81284850,81283409,81282189,81280609,81277031,81275969,81272516,81270918,81260238,81253073,81252195,81251493,81246885,81245000	81295305,81289808,81284895,81283502,81282332,81280733,81277133,81276151,81272627,81271024,81260394,81253240,81252683,81251612,81247061,81246673	Gene ID= ENSG00000157637.12 TPM= 476.88 Transcript Type= protein_coding
chr17	81251196	81295267	81251196	81295267	-	ENST00000288439.9@SLC38A10	ENST00000288439.9	protein_coding	81294823,81289691,81284850,81283409,81282189,81280609,81277031,81275969,81272516,81270918,81260238,81253073,81252195,81251196	81295267,81289808,81284895,81283502,81282332,81280733,81277133,81276151,81272627,81271024,81260394,81253240,81252683,81251612	Gene ID= ENSG00000157637.12 TPM= 2.34 Transcript Type= protein_coding
chr17	81272225	81275738	81272225	81275738	+	transcript7885.chr17.nnic@NA	transcript7885.chr17.nnic	NA	81272225	81275738	Gene ID= novel_gene_chr17_7886 TPM= 7.01 Transcript Type= NA
chr17	81345533	81346049	81345533	81346049	-	transcript7893.chr17.nnic@NA	transcript7893.chr17.nnic	NA	81345533	81346049	Gene ID= novel_gene_chr17_7894 TPM= 4.67 Transcript Type= NA
chr17	81389710	81393097	81389710	81393097	-	transcript7896.chr17.nnic@NA	transcript7896.chr17.nnic	NA	81389710	81393097	Gene ID= novel_gene_chr17_7897 TPM= 10.51 Transcript Type= NA
chr17	81509971	81512874	81509971	81512874	-	ENST00000331925.6@ACTG1	ENST00000331925.6	protein_coding	81512734,81512232,81511903,81511188,81510927,81509971	81512874,81512360,81512142,81511626,81511108,81510833	Gene ID= ENSG00000184009.9 TPM= 3460.41 Transcript Type= protein_coding
chr17	81510008	81512790	81510008	81512790	-	ENST00000575087.5@ACTG1	ENST00000575087.5	protein_coding	81512606,81512232,81511903,81511188,81510927,81510008	81512790,81512360,81512142,81511626,81511108,81510833	Gene ID= ENSG00000184009.9 TPM= 4.12 Transcript Type= protein_coding
chr17	81509988	81512780	81509988	81512780	-	ENST00000573283.5@ACTG1	ENST00000573283.5	protein_coding	81512615,81512232,81511903,81511188,81510927,81509988	81512780,81512360,81512142,81511626,81511108,81510833	Gene ID= ENSG00000184009.9 TPM= 38.99 Transcript Type= protein_coding
chr17	81509989	81512781	81509989	81512781	-	ENST00000575842.5@ACTG1	ENST00000575842.5	protein_coding	81512232,81511903,81511188,81510927,81509989	81512781,81512142,81511626,81511108,81510833	Gene ID= ENSG00000184009.9 TPM= 6.91 Transcript Type= protein_coding
chr17	81509992	81512780	81509992	81512780	-	ENST00000576917.5@ACTG1	ENST00000576917.5	protein_coding	81512734,81512232,81511903,81510927,81509992	81512780,81512360,81512142,81511626,81510833	Gene ID= ENSG00000184009.9 TPM= 2.44 Transcript Type= retained_intron
chr17	81510013	81512791	81510013	81512791	-	ENST00000576544.5@ACTG1	ENST00000576544.5	protein_coding	81512734,81512232,81511903,81511188,81510927,81510479,81510013	81512791,81512360,81512142,81511626,81511108,81510833,81510329	Gene ID= ENSG00000184009.9 TPM= 4.41 Transcript Type= nonsense_mediated_decay
chr17	81538576	81542415	81538576	81542415	+	transcript7966.chr17.nnic@NA	transcript7966.chr17.nnic	NA	81538576	81542415	Gene ID= novel_gene_chr17_7967 TPM= 6.62 Transcript Type= NA
chr17	81539885	81552377	81539885	81552377	-	ENST00000327787.12@FAAP100	ENST00000327787.12	protein_coding	81552166,81551928,81550248,81549206,81546909,81545746,81544004,81541309,81539885	81552377,81552052,81551203,81549362,81547678,81545882,81544120,81541395,81540950	Gene ID= ENSG00000185504.16 TPM= 23.55 Transcript Type= protein_coding
chr17	81539885	81552376	81539885	81552376	-	ENST00000443656.6@FAAP100	ENST00000443656.6	protein_coding	81552166,81551732,81550248,81549206,81546909,81545746,81544004,81541309,81539885	81552376,81552052,81551203,81549362,81547678,81545882,81544120,81541395,81540950	Gene ID= ENSG00000185504.16 TPM= 18.88 Transcript Type= nonsense_mediated_decay
chr17	81556887	81637146	81556887	81637146	-	ENST00000331134.10@NPLOC4	ENST00000331134.10	protein_coding	81636916,81629725,81622166,81613318,81610210,81608728,81606691,81604548,81600341,81597245,81596116,81588944,81572017,81569016,81567417,81565505,81556887	81637146,81629805,81622278,81613494,81610258,81608822,81606814,81604727,81600427,81597316,81596242,81589104,81572088,81569111,81567533,81565607,81559416	Gene ID= ENSG00000182446.13 TPM= 120.26 Transcript Type= protein_coding
chr17	81665036	81666635	81665036	81666635	-	ENST00000575963.1@OXLD1	ENST00000575963.1	protein_coding	81665036	81666635	Gene ID= ENSG00000204237.4 TPM= 26.85 Transcript Type= retained_intron
chr17	81665036	81666588	81665036	81666588	-	ENST00000374741.3@OXLD1	ENST00000374741.3	protein_coding	81666518,81665036	81666588,81665584	Gene ID= ENSG00000204237.4 TPM= 12.84 Transcript Type= protein_coding
chr17	81666364	81673899	81666364	81673899	+	ENST00000329214.12@CCDC137	ENST00000329214.12	protein_coding	81666364,81667729,81670225,81671744,81672076,81672495	81666900,81667862,81670453,81671826,81672155,81673899	Gene ID= ENSG00000185298.12 TPM= 53.13 Transcript Type= protein_coding
chr17	81666750	81673899	81666750	81673899	+	transcript7977.chr17.nic@CCDC137	transcript7977.chr17.nic	protein_coding	81666750,81667729,81670225,81671744,81672076,81672495	81667007,81667862,81670453,81671826,81672155,81673899	Gene ID= ENSG00000185298.12 TPM= 7.59 Transcript Type= NA
chr17	81681174	81683924	81681174	81683924	-	ENST00000397498.8@ARL16	ENST00000397498.8	protein_coding	81683693,81683536,81683013,81682034,81681174	81683924,81683594,81683126,81682149,81681879	Gene ID= ENSG00000214087.8 TPM= 7.01 Transcript Type= protein_coding
chr17	81681187	81683781	81681187	81683781	-	ENST00000577142.1@ARL16	ENST00000577142.1	protein_coding	81683693,81682034,81681187	81683781,81683594,81681879	Gene ID= ENSG00000214087.8 TPM= 1.17 Transcript Type= retained_intron
chr17	81681220	81683743	81681220	81683743	-	ENST00000571082.5@ARL16	ENST00000571082.5	protein_coding	81683693,81683536,81683013,81682034,81681220	81683743,81683594,81683126,81682675,81681879	Gene ID= ENSG00000214087.8 TPM= 10.51 Transcript Type= retained_intron
chr17	81681222	81683738	81681222	81683738	-	ENST00000570910.1@ARL16	ENST00000570910.1	protein_coding	81683693,81683536,81682034,81681222	81683738,81683594,81683126,81681879	Gene ID= ENSG00000214087.8 TPM= 4.67 Transcript Type= retained_intron
chr17	81683932	81702119	81683932	81702119	+	ENST00000329138.8@HGS	ENST00000329138.8	protein_coding	81683932,81685605,81686312,81687003,81688704,81690182,81690674,81691447,81693503,81693654,81693870,81694815,81694924,81695164,81695786,81696357,81696607,81696824,81700467,81700695,81701045,81701508	81684103,81685689,81686387,81687095,81688827,81690234,81690742,81691571,81693581,81693752,81693965,81694853,81695067,81695223,81695999,81696529,81696747,81696998,81700600,81700814,81701131,81702119	Gene ID= ENSG00000185359.12 TPM= 193.74 Transcript Type= protein_coding
chr17	81683966	81702119	81683966	81702119	+	transcript8002.chr17.nic@HGS	transcript8002.chr17.nic	protein_coding	81683966,81685605,81686312,81687003,81688704,81690182,81690674,81691447,81693503,81693654,81693870,81694815,81695164,81695786,81696357,81696607,81696824,81700467,81700695,81701045,81701508	81684103,81685689,81686387,81687095,81688827,81690234,81690742,81691571,81693581,81693752,81693965,81695067,81695223,81695999,81696529,81696747,81696998,81700600,81700814,81701131,81702119	Gene ID= ENSG00000185359.12 TPM= 11.21 Transcript Type= NA
chr17	81701324	81703300	81701324	81703300	-	ENST00000575312.1@AC139530.1	ENST00000575312.1	antisense_RNA	81701324	81703300	Gene ID= ENSG00000262049.1 TPM= 7.01 Transcript Type= antisense_RNA
chr17	81703357	81707526	81703357	81707526	+	ENST00000333676.7@MRPL12	ENST00000333676.7	protein_coding	81703357,81704244,81704633,81706906,81707124	81703575,81704430,81704716,81707040,81707526	Gene ID= ENSG00000262814.7 TPM= 59.55 Transcript Type= protein_coding
chr17	81711992	81721012	81711992	81721012	+	transcript8022.chr17.nnic@AC139530.2	transcript8022.chr17.nnic	protein_coding	81711992,81714965,81715478,81715693,81716009,81716812,81717002,81717399,81717784,81719831,81719976	81712519,81715072,81715592,81715741,81716050,81716855,81717072,81717491,81717861,81719887,81721012	Gene ID= ENSG00000262660.1 TPM= 4.09 Transcript Type= NA
chr17	81709317	81712205	81709317	81712205	-	transcript8026.chr17.nnic@NA	transcript8026.chr17.nnic	NA	81709317	81712205	Gene ID= novel_gene_chr17_8027 TPM= 3.5 Transcript Type= NA
chr17	81712341	81721012	81712341	81721012	+	ENST00000350690.9@SLC25A10	ENST00000350690.9	protein_coding	81712341,81714953,81715478,81715693,81716009,81716812,81717002,81717399,81717784,81719831,81719976	81712519,81715072,81715592,81715741,81716050,81716855,81717072,81717491,81717861,81719887,81721012	Gene ID= ENSG00000183048.11 TPM= 7.59 Transcript Type= protein_coding
chr17	81822411	81833268	81822411	81833268	-	ENST00000455127.6@MCRIP1	ENST00000455127.6	protein_coding	81833238,81824499,81824287,81823412,81822411	81833268,81824554,81824405,81823513,81823311	Gene ID= ENSG00000225663.7 TPM= 129.99 Transcript Type= protein_coding
chr17	81822429	81833302	81822429	81833302	-	ENST00000573478.5@MCRIP1	ENST00000573478.5	protein_coding	81833238,81824499,81824287,81822429	81833302,81824554,81824405,81823311	Gene ID= ENSG00000225663.7 TPM= 2.14 Transcript Type= protein_coding
chr17	81822417	81833291	81822417	81833291	-	ENST00000538396.5@MCRIP1	ENST00000538396.5	protein_coding	81833238,81824499,81824287,81823412,81823209,81822417	81833291,81824554,81824405,81823513,81823311,81822907	Gene ID= ENSG00000225663.7 TPM= 13.81 Transcript Type= protein_coding
chr17	81828669	81831421	81828669	81831421	+	transcript8063.chr17.nnic@NA	transcript8063.chr17.nnic	NA	81828669	81831421	Gene ID= novel_gene_chr17_8064 TPM= 14.01 Transcript Type= NA
chr17	81843159	81860694	81843159	81860694	-	ENST00000331483.8@P4HB	ENST00000331483.8	protein_coding	81860327,81859181,81855453,81855142,81847243,81846947,81846429,81845871,81845561,81845144,81843159	81860694,81859387,81855586,81855279,81847347,81847072,81846629,81845991,81845742,81845230,81844092	Gene ID= ENSG00000185624.14 TPM= 1804.38 Transcript Type= protein_coding
chr17	81843161	81860566	81843161	81860566	-	ENST00000575069.5@P4HB	ENST00000575069.5	protein_coding	81860347,81859181,81855453,81855142,81847243,81846947,81846429,81845871,81845561,81845144,81843161	81860566,81859387,81855586,81855279,81847347,81847072,81846629,81845991,81845742,81845230,81844092	Gene ID= ENSG00000185624.14 TPM= 70.79 Transcript Type= nonsense_mediated_decay
chr17	81867728	81871406	81867728	81871406	-	transcript8069.chr17.nnic@ARHGDIA	transcript8069.chr17.nnic	protein_coding	81871298,81869741,81869542,81869330,81869173,81869048,81867728	81871406,81869957,81869625,81869406,81869236,81869075,81868969	Gene ID= ENSG00000141522.11 TPM= 61.3 Transcript Type= NA
chr17	81867721	81871406	81867721	81871406	-	ENST00000269321.11@ARHGDIA	ENST00000269321.11	protein_coding	81871298,81869741,81869542,81869330,81869173,81867721	81871406,81869957,81869625,81869406,81869236,81869075	Gene ID= ENSG00000141522.11 TPM= 230.6 Transcript Type= protein_coding
chr17	81878425	81881106	81878425	81881106	-	ENST00000582866.1@AC145207.5	ENST00000582866.1	lincRNA	81878425	81881106	Gene ID= ENSG00000263731.1 TPM= 7.01 Transcript Type= lincRNA
chr17	81883705	81887986	81883705	81887986	+	transcript8089.chr17.nnic@NA	transcript8089.chr17.nnic	NA	81883705,81885008,81887403	81884049,81886925,81887986	Gene ID= novel_gene_chr17_8090 TPM= 3.5 Transcript Type= NA
chr17	81887844	81891621	81887844	81891621	-	transcript8071.chr17.nic@ALYREF	transcript8071.chr17.nic	protein_coding	81891323,81890689,81889182,81888876,81888520,81888241,81887844	81891621,81890820,81889329,81888989,81888583,81888418,81888145	Gene ID= ENSG00000183684.7 TPM= 3.5 Transcript Type= NA
chr17	81887835	81891621	81887835	81891621	-	transcript8079.chr17.nic@ALYREF	transcript8079.chr17.nic	protein_coding	81891323,81890689,81889182,81888520,81887835	81891621,81890820,81889329,81888583,81888418	Gene ID= ENSG00000183684.7 TPM= 2.34 Transcript Type= NA
chr17	81887844	81891586	81887844	81891586	-	ENST00000505490.2@ALYREF	ENST00000505490.2	protein_coding	81891323,81890689,81889182,81888520,81888241,81887844	81891586,81890820,81889329,81888583,81888418,81888145	Gene ID= ENSG00000183684.7 TPM= 72.39 Transcript Type= protein_coding
chr17	81891713	81900533	81891713	81900533	+	ENST00000612413.4@ANAPC11	ENST00000612413.4	protein_coding	81891713,81893552,81894467,81899920	81891841,81893614,81894624,81900533	Gene ID= ENSG00000141552.17 TPM= 1.17 Transcript Type= protein_coding
chr17	81891721	81900533	81891721	81900533	+	ENST00000344877.9@ANAPC11	ENST00000344877.9	protein_coding	81891721,81893552,81894467,81899920	81891841,81893614,81894586,81900533	Gene ID= ENSG00000141552.17 TPM= 26.85 Transcript Type= protein_coding
chr17	81891938	81900254	81891938	81900254	+	ENST00000392376.7@ANAPC11	ENST00000392376.7	protein_coding	81891938,81893552,81894467,81899920	81892106,81893614,81894586,81900254	Gene ID= ENSG00000141552.17 TPM= 1.17 Transcript Type= protein_coding
chr17	81891723	81900356	81891723	81900356	+	ENST00000571024.6@ANAPC11	ENST00000571024.6	protein_coding	81891723,81894467,81899920	81891833,81894586,81900356	Gene ID= ENSG00000141552.17 TPM= 29.19 Transcript Type= protein_coding
chr17	81891720	81900252	81891720	81900252	+	ENST00000579978.5@ANAPC11	ENST00000579978.5	protein_coding	81891720,81894467,81899920	81891841,81894586,81900252	Gene ID= ENSG00000141552.17 TPM= 21.02 Transcript Type= protein_coding
chr17	81891735	81900356	81891735	81900356	+	ENST00000572851.6@ANAPC11	ENST00000572851.6	protein_coding	81891735,81894467,81899920	81891863,81894586,81900356	Gene ID= ENSG00000141552.17 TPM= 7.01 Transcript Type= protein_coding
chr17	81891746	81900254	81891746	81900254	+	ENST00000571874.6@ANAPC11	ENST00000571874.6	protein_coding	81891746,81893552,81894467,81899920	81891863,81893614,81894586,81900254	Gene ID= ENSG00000141552.17 TPM= 54.88 Transcript Type= protein_coding
chr17	81891732	81900356	81891732	81900356	+	ENST00000574924.6@ANAPC11	ENST00000574924.6	protein_coding	81891732,81893552,81894467,81899920	81891833,81893614,81894586,81900356	Gene ID= ENSG00000141552.17 TPM= 1.17 Transcript Type= protein_coding
chr17	81891739	81900254	81891739	81900254	+	ENST00000357385.7@ANAPC11	ENST00000357385.7	protein_coding	81891739,81894467,81899242,81899920	81891863,81894586,81899542,81900254	Gene ID= ENSG00000141552.17 TPM= 1.17 Transcript Type= protein_coding
chr17	81897722	81900255	81897722	81900255	+	transcript8098.chr17.nnic@NA	transcript8098.chr17.nnic	NA	81897722	81900255	Gene ID= novel_gene_chr17_8099 TPM= 3.5 Transcript Type= NA
chr17	81900965	81911464	81900965	81911464	-	ENST00000538936.6@PCYT2	ENST00000538936.6	protein_coding	81911267,81909514,81908876,81908568,81907773,81907554,81906760,81906464,81906100,81905670,81905382,81905066,81900965	81911464,81909602,81909037,81908634,81907857,81907598,81906898,81906546,81906177,81905735,81905447,81905154,81904944	Gene ID= ENSG00000185813.10 TPM= 11.68 Transcript Type= protein_coding
chr17	81904343	81911406	81904343	81911406	-	ENST00000538721.6@PCYT2	ENST00000538721.6	protein_coding	81911267,81909514,81908876,81908568,81907773,81907554,81907204,81906760,81906464,81906100,81905670,81905382,81905066,81904343	81911406,81909602,81909037,81908634,81907857,81907598,81907257,81906898,81906546,81906177,81905735,81905447,81905154,81904944	Gene ID= ENSG00000185813.10 TPM= 25.69 Transcript Type= protein_coding
chr17	81911939	81918190	81911939	81918190	-	transcript8148.chr17.nnic@SIRT7	transcript8148.chr17.nnic	protein_coding	81918039,81917830,81917615,81915611,81915440,81914604,81914294,81914087,81913774,81911939	81918190,81917967,81917719,81915681,81915512,81914702,81914456,81914167,81913880,81912614	Gene ID= ENSG00000187531.13 TPM= 4.2 Transcript Type= NA
chr17	81911939	81918194	81911939	81918194	-	ENST00000328666.10@SIRT7	ENST00000328666.10	protein_coding	81918039,81917830,81917615,81915611,81915440,81914604,81914294,81914087,81913774,81911939	81918194,81917967,81917719,81915681,81915512,81914702,81914530,81914167,81913880,81912614	Gene ID= ENSG00000187531.13 TPM= 31.84 Transcript Type= protein_coding
chr17	81911939	81918167	81911939	81918167	-	transcript8154.chr17.nic@SIRT7	transcript8154.chr17.nic	protein_coding	81917830,81917615,81915611,81915440,81914604,81914294,81914087,81913774,81911939	81918167,81917719,81915681,81915512,81914702,81914530,81914167,81913880,81912614	Gene ID= ENSG00000187531.13 TPM= 11.99 Transcript Type= NA
chr17	81911939	81918190	81911939	81918190	-	transcript8155.chr17.nic@SIRT7	transcript8155.chr17.nic	protein_coding	81918039,81917615,81915611,81915440,81914604,81914294,81914087,81913774,81911939	81918190,81917967,81915681,81915512,81914702,81914530,81914167,81913880,81912614	Gene ID= ENSG00000187531.13 TPM= 4.99 Transcript Type= NA
chr17	81911939	81918152	81911939	81918152	-	ENST00000571832.5@SIRT7	ENST00000571832.5	protein_coding	81918039,81917830,81917615,81915611,81914294,81914087,81913774,81911939	81918152,81917967,81917719,81915681,81915512,81914167,81913880,81912614	Gene ID= ENSG00000187531.13 TPM= 3.04 Transcript Type= retained_intron
chr17	81921680	81927166	81921680	81927166	-	transcript8177.chr17.nnic@MAFG	transcript8177.chr17.nnic	protein_coding	81926957,81923150,81921680	81927166,81923214,81923057	Gene ID= ENSG00000197063.10 TPM= 7.01 Transcript Type= NA
chr17	81918270	81927714	81918270	81927714	-	ENST00000357736.8@MAFG	ENST00000357736.8	protein_coding	81927528,81923150,81918270	81927714,81923214,81923057	Gene ID= ENSG00000197063.10 TPM= 29.19 Transcript Type= protein_coding
chr17	81927829	81930753	81927829	81930753	+	ENST00000582106.1@MAFG-AS1	ENST00000582106.1	antisense_RNA	81927829,81929476	81928445,81930753	Gene ID= ENSG00000265688.1 TPM= 11.68 Transcript Type= antisense_RNA
chr17	81932384	81937328	81932384	81937328	-	ENST00000619204.4@PYCR1	ENST00000619204.4	protein_coding	81937262,81936748,81936123,81935337,81934926,81934653,81934326,81932384	81937328,81936861,81936193,81935516,81935147,81934745,81934489,81933376	Gene ID= ENSG00000183010.16 TPM= 51.37 Transcript Type= protein_coding
chr17	81932384	81937328	81932384	81937328	-	ENST00000403172.8@PYCR1	ENST00000403172.8	protein_coding	81937262,81936748,81936123,81935337,81934926,81934326,81932384	81937328,81936861,81936193,81935516,81935147,81934489,81933376	Gene ID= ENSG00000183010.16 TPM= 2.34 Transcript Type= protein_coding
chr17	81932384	81937328	81932384	81937328	-	ENST00000629768.2@PYCR1	ENST00000629768.2	protein_coding	81937262,81936748,81936123,81935337,81934926,81934653,81932384	81937328,81936861,81936193,81935516,81935147,81934745,81933376	Gene ID= ENSG00000183010.16 TPM= 11.68 Transcript Type= protein_coding
chr17	81952507	81961293	81952507	81961293	-	ENST00000409678.7@NOTUM	ENST00000409678.7	protein_coding	81960587,81959640,81959471,81958935,81958335,81957806,81956883,81956650,81955397,81954256,81952507	81961293,81959692,81959566,81958995,81958393,81957908,81957074,81956750,81955544,81954303,81953267	Gene ID= ENSG00000185269.11 TPM= 12.84 Transcript Type= protein_coding
chr17	81977550	82017406	81977550	82017406	+	ENST00000306739.8@ASPSCR1	ENST00000306739.8	protein_coding	81977550,81979184,81983554,81985507,81994821,81995992,81996420,82009037,82009486,82010802,82011543,82012231,82016476,82016800,82016941,82017309	81977748,81979239,81983668,81985607,81994878,81996065,81996846,82009191,82009567,82010868,82011605,82012283,82016527,82016869,82017113,82017406	Gene ID= ENSG00000169696.15 TPM= 68.3 Transcript Type= protein_coding
chr17	81977629	82017406	81977629	82017406	+	transcript8214.chr17.nic@ASPSCR1	transcript8214.chr17.nic	protein_coding	81977629,81979184,81983554,81985507,81994821,81995992,81996420,82009037,82009486,82010802,82011543,82012231,82016476,82016800,82017309	81977748,81979239,81983668,81985607,81994878,81996065,81996846,82009191,82009567,82010868,82011605,82012283,82016527,82017113,82017406	Gene ID= ENSG00000169696.15 TPM= 7.01 Transcript Type= NA
chr17	81977629	82017406	81977629	82017406	+	transcript8217.chr17.nic@ASPSCR1	transcript8217.chr17.nic	protein_coding	81977629,81983554,81985507,81994821,81995992,81996420,82009037,82009486,82010802,82011543,82012231,82016476,82016800,82016941,82017309	81977748,81983668,81985607,81994878,81996065,81996846,82009191,82009567,82010868,82011605,82012283,82016527,82016869,82017113,82017406	Gene ID= ENSG00000169696.15 TPM= 5.25 Transcript Type= NA
chr17	81977622	81999644	81977622	81999644	+	transcript8222.chr17.nic@ASPSCR1	transcript8222.chr17.nic	protein_coding	81977622,81979184,81983554,81985507,81994821,81995992,81996420	81977748,81979239,81983668,81985607,81994878,81996065,81999644	Gene ID= ENSG00000169696.15 TPM= 4.67 Transcript Type= NA
chr17	81977619	81986469	81977619	81986469	+	transcript8226.chr17.nic@ASPSCR1	transcript8226.chr17.nic	protein_coding	81977619,81979184,81983554,81985507	81977748,81979239,81983668,81986469	Gene ID= ENSG00000169696.15 TPM= 3.5 Transcript Type= NA
chr17	81977631	81995150	81977631	81995150	+	ENST00000581647.5@ASPSCR1	ENST00000581647.5	protein_coding	81977631,81979184,81983554,81985507,81994821	81977748,81979239,81983668,81985607,81995150	Gene ID= ENSG00000169696.15 TPM= 1.17 Transcript Type= protein_coding
chr17	82018702	82022876	82018702	82022876	-	transcript8370.chr17.nnic@NA	transcript8370.chr17.nnic	NA	82018702	82022876	Gene ID= novel_gene_chr17_8371 TPM= 5.84 Transcript Type= NA
chr17	82018703	82022918	82018703	82022918	-	ENST00000392359.7@CENPX	ENST00000392359.7	protein_coding	82022826,82019858,82019641,82019293,82018703	82022918,82019909,82019694,82019381,82019219	Gene ID= ENSG00000169689.14 TPM= 28.61 Transcript Type= protein_coding
chr17	82018703	82022918	82018703	82022918	-	ENST00000306704.10@CENPX	ENST00000306704.10	protein_coding	82022826,82019858,82019293,82018703	82022918,82019909,82019381,82019219	Gene ID= ENSG00000169689.14 TPM= 16.93 Transcript Type= protein_coding
chr17	82018703	82022898	82018703	82022898	-	transcript8355.chr17.nic@CENPX	transcript8355.chr17.nic	protein_coding	82022826,82019858,82019641,82018703	82022898,82019909,82019694,82019381	Gene ID= ENSG00000169689.14 TPM= 3.5 Transcript Type= NA
chr17	82018703	82022870	82018703	82022870	-	transcript8363.chr17.nic@CENPX	transcript8363.chr17.nic	protein_coding	82022639,82019858,82018703	82022870,82019909,82019381	Gene ID= ENSG00000169689.14 TPM= 2.34 Transcript Type= NA
chr17	82018703	82022892	82018703	82022892	-	ENST00000580435.5@CENPX	ENST00000580435.5	protein_coding	82022826,82019858,82019308,82018703	82022892,82019909,82019381,82019219	Gene ID= ENSG00000169689.14 TPM= 2.34 Transcript Type= protein_coding
chr17	82026102	82031151	82026102	82031151	+	transcript8282.chr17.nic@LRRC45	transcript8282.chr17.nic	protein_coding	82026102,82027386,82027674,82028011,82028234,82028397,82028613,82029543,82030065,82030319,82030609	82027011,82027444,82027751,82028146,82028311,82028508,82029185,82029635,82030238,82030466,82031151	Gene ID= ENSG00000169683.7 TPM= 4.67 Transcript Type= NA
chr17	82023302	82031151	82023302	82031151	+	ENST00000306688.7@LRRC45	ENST00000306688.7	protein_coding	82023302,82024278,82024693,82025000,82025379,82026899,82027386,82027674,82028011,82028234,82028397,82028613,82029093,82029543,82030065,82030319,82030609	82023863,82024339,82024763,82025178,82025507,82027011,82027444,82027751,82028146,82028311,82028508,82028683,82029185,82029635,82030238,82030466,82031151	Gene ID= ENSG00000169683.7 TPM= 46.7 Transcript Type= protein_coding
chr17	82031624	82034202	82031624	82034202	+	ENST00000306897.8@RAC3	ENST00000306897.8	protein_coding	82031624,82032387,82032711,82032947,82033440,82033699	82031796,82032458,82032828,82033009,82033599,82034202	Gene ID= ENSG00000169750.8 TPM= 2.34 Transcript Type= protein_coding
chr17	82035858	82037732	82035858	82037732	-	ENST00000306869.6@DCXR	ENST00000306869.6	protein_coding	82037631,82037450,82036859,82036721,82036544,82036384,82036191,82035858	82037732,82037547,82037013,82036763,82036643,82036448,82036308,82036063	Gene ID= ENSG00000169738.7 TPM= 129.64 Transcript Type= protein_coding
chr17	82035879	82037698	82035879	82037698	-	ENST00000580320.5@DCXR	ENST00000580320.5	protein_coding	82037450,82036859,82036721,82036544,82036384,82036191,82035879	82037698,82037013,82036763,82036643,82036448,82036308,82036063	Gene ID= ENSG00000169738.7 TPM= 15.21 Transcript Type= retained_intron
chr17	82035881	82037732	82035881	82037732	-	transcript8329.chr17.nic@DCXR	transcript8329.chr17.nic	protein_coding	82037631,82037450,82036859,82036384,82036191,82035881	82037732,82037547,82037013,82036763,82036308,82036063	Gene ID= ENSG00000169738.7 TPM= 4.12 Transcript Type= NA
chr17	82035881	82037736	82035881	82037736	-	transcript8365.chr17.nic@DCXR	transcript8365.chr17.nic	protein_coding	82036859,82036191,82035881	82037736,82036763,82036063	Gene ID= ENSG00000169738.7 TPM= 3.74 Transcript Type= NA
chr17	82035896	82037681	82035896	82037681	-	ENST00000578885.5@DCXR	ENST00000578885.5	protein_coding	82037631,82037450,82036859,82036721,82036191,82035896	82037681,82037547,82037013,82036763,82036643,82036063	Gene ID= ENSG00000169738.7 TPM= 1.17 Transcript Type= retained_intron
chr17	82047906	82051877	82047906	82051877	-	transcript8306.chr17.nnic@RFNG	transcript8306.chr17.nnic	protein_coding	82051500,82051294,82050927,82050662,82050402,82049918,82049677,82049031,82047906	82051877,82051342,82051016,82050764,82050555,82050006,82049842,82049116,82048807	Gene ID= ENSG00000169733.11 TPM= 6.47 Transcript Type= NA
chr17	82047906	82051877	82047906	82051877	-	transcript8307.chr17.nnic@RFNG	transcript8307.chr17.nnic	protein_coding	82051500,82051294,82051012,82050662,82050402,82049918,82049677,82049031,82047906	82051877,82051342,82051189,82050764,82050555,82050006,82049842,82049116,82048807	Gene ID= ENSG00000169733.11 TPM= 5.3 Transcript Type= NA
chr17	82047906	82051877	82047906	82051877	-	transcript8314.chr17.nic@RFNG	transcript8314.chr17.nic	protein_coding	82051500,82051012,82050662,82050402,82049918,82049677,82049031,82047906	82051877,82051342,82050764,82050555,82050006,82049842,82049116,82048807	Gene ID= ENSG00000169733.11 TPM= 6.47 Transcript Type= NA
chr17	82047906	82051808	82047906	82051808	-	transcript8323.chr17.nic@RFNG	transcript8323.chr17.nic	protein_coding	82051500,82050662,82050402,82049918,82049677,82049031,82047906	82051808,82051342,82050555,82050006,82049842,82049116,82048807	Gene ID= ENSG00000169733.11 TPM= 7.64 Transcript Type= NA
chr17	82047906	82051877	82047906	82051877	-	transcript8325.chr17.nic@RFNG	transcript8325.chr17.nic	protein_coding	82051500,82051294,82050662,82049918,82049677,82049031,82047906	82051877,82051342,82050764,82050555,82049842,82049116,82048807	Gene ID= ENSG00000169733.11 TPM= 7.64 Transcript Type= NA
chr17	82047906	82051877	82047906	82051877	-	transcript8331.chr17.nic@RFNG	transcript8331.chr17.nic	protein_coding	82051500,82050662,82049918,82049677,82049031,82047906	82051877,82051342,82050555,82049842,82049116,82048807	Gene ID= ENSG00000169733.11 TPM= 7.47 Transcript Type= NA
chr17	82047906	82051877	82047906	82051877	-	transcript8348.chr17.nic@RFNG	transcript8348.chr17.nic	protein_coding	82051500,82050662,82049677,82049031,82047906	82051877,82051342,82050555,82049116,82048807	Gene ID= ENSG00000169733.11 TPM= 9.81 Transcript Type= NA
chr17	82047906	82051810	82047906	82051810	-	transcript8359.chr17.nic@RFNG	transcript8359.chr17.nic	protein_coding	82051500,82049677,82049031,82047906	82051810,82051342,82049116,82048807	Gene ID= ENSG00000169733.11 TPM= 6.31 Transcript Type= NA
chr17	82047902	82051774	82047902	82051774	-	ENST00000310496.8@RFNG	ENST00000310496.8	protein_coding	82051500,82051294,82050662,82050402,82049918,82049677,82049031,82047902	82051774,82051342,82050764,82050555,82050006,82049842,82049116,82048807	Gene ID= ENSG00000169733.11 TPM= 36.83 Transcript Type= protein_coding
chr17	82051875	82057470	82051875	82057470	+	ENST00000320548.8@GPS1	ENST00000320548.8	protein_coding	82051875,82052375,82053274,82053868,82054510,82054898,82055162,82055740,82056001,82056286,82056470,82056629,82056840,82057053	82051964,82052459,82053366,82054049,82054810,82054975,82055222,82055825,82056095,82056391,82056550,82056766,82056974,82057470	Gene ID= ENSG00000169727.12 TPM= 7.59 Transcript Type= protein_coding
chr17	82051892	82057470	82051892	82057470	+	transcript8237.chr17.nic@GPS1	transcript8237.chr17.nic	protein_coding	82051892,82052256,82053274,82053868,82054510,82054898,82055162,82055740,82056001,82056286,82056470,82056629,82056840,82057053	82051964,82052459,82053366,82054049,82054810,82054975,82055222,82055825,82056095,82056391,82056550,82056766,82056974,82057470	Gene ID= ENSG00000169727.12 TPM= 9.92 Transcript Type= NA
chr17	82051865	82057470	82051865	82057470	+	ENST00000578552.5@GPS1	ENST00000578552.5	protein_coding	82051865,82053274,82053868,82054510,82054898,82055162,82055740,82056001,82056286,82056470,82056629,82056840,82057053	82051964,82053366,82054049,82054810,82054975,82055222,82055825,82056095,82056391,82056550,82056766,82056974,82057470	Gene ID= ENSG00000169727.12 TPM= 131.35 Transcript Type= protein_coding
chr17	82051909	82057470	82051909	82057470	+	ENST00000306823.10@GPS1	ENST00000306823.10	protein_coding	82051909,82053274,82053868,82054498,82054898,82055162,82055740,82056001,82056286,82056470,82056629,82056840,82057053	82051964,82053366,82054049,82054810,82054975,82055222,82055825,82056095,82056391,82056550,82056766,82056974,82057470	Gene ID= ENSG00000169727.12 TPM= 18.97 Transcript Type= protein_coding
chr17	82051897	82057470	82051897	82057470	+	ENST00000623691.3@GPS1	ENST00000623691.3	protein_coding	82051897,82053274,82053868,82054510,82054898,82055165,82055740,82056001,82056286,82056470,82056629,82056840,82057053	82051964,82053366,82054049,82054810,82054975,82055222,82055825,82056095,82056391,82056550,82056766,82056974,82057470	Gene ID= ENSG00000169727.12 TPM= 15.72 Transcript Type= protein_coding
chr17	82051929	82057463	82051929	82057463	+	ENST00000584460.5@GPS1	ENST00000584460.5	protein_coding	82051929,82053234,82053868,82054498,82054898,82055162,82055740,82056001,82056286,82056470,82056629,82056840,82057053	82051964,82053366,82054049,82054810,82054975,82055222,82055825,82056095,82056391,82056550,82056766,82056974,82057463	Gene ID= ENSG00000169727.12 TPM= 2.97 Transcript Type= nonsense_mediated_decay
chr17	82057880	82065848	82057880	82065848	-	transcript8280.chr17.nic@DUS1L	transcript8280.chr17.nic	protein_coding	82065613,82064823,82064126,82063468,82062861,82061901,82061618,82061209,82060865,82060701,82058341,82057880	82065848,82065069,82064234,82063518,82062973,82061983,82061721,82061353,82060961,82060783,82060093,82058254	Gene ID= ENSG00000169718.17 TPM= 14.83 Transcript Type= NA
chr17	82078336	82081218	82078336	82081218	-	transcript8376.chr17.nnic@NA	transcript8376.chr17.nnic	NA	82078336	82081218	Gene ID= novel_gene_chr17_8377 TPM= 40.87 Transcript Type= NA
chr17	82101470	82212867	82101470	82212867	-	transcript8382.chr17.nnic@CCDC57	transcript8382.chr17.nnic	protein_coding	82212785,82201672,82198337,82195263,82193982,82193756,82188219,82183774,82179027,82178474,82172638,82171701,82163200,82157748,82151560,82134073,82128493,82127692,82101470	82212867,82201952,82198422,82195364,82194139,82193830,82188419,82183932,82179189,82178605,82172860,82171853,82163357,82157948,82151773,82134194,82128597,82127908,82101866	Gene ID= ENSG00000176155.18 TPM= 5.25 Transcript Type= NA
chr17	82101470	82157806	82101470	82157806	-	transcript8387.chr17.nic@CCDC57	transcript8387.chr17.nic	protein_coding	82151560,82134073,82128493,82127692,82101470	82157806,82134194,82128597,82127908,82101866	Gene ID= ENSG00000176155.18 TPM= 12.26 Transcript Type= NA
chr17	82101460	82106375	82101460	82106375	-	ENST00000584717.1@CCDC57	ENST00000584717.1	protein_coding	82106270,82101460	82106375,82101866	Gene ID= ENSG00000176155.18 TPM= 5.84 Transcript Type= processed_transcript
chr17	82104532	82108434	82104532	82108434	-	transcript8394.chr17.nnic@NA	transcript8394.chr17.nnic	NA	82104532	82108434	Gene ID= novel_gene_chr17_8395 TPM= 5.84 Transcript Type= NA
chr17	82228406	82239498	82228406	82239498	+	ENST00000392341.5@SLC16A3	ENST00000392341.5	protein_coding	82228406,82235983,82236729,82237138,82238702	82228545,82236231,82236872,82237893,82239498	Gene ID= ENSG00000141526.16 TPM= 16.05 Transcript Type= protein_coding
chr17	82228991	82261129	82228991	82261129	+	transcript8414.chr17.nic@SLC16A3	transcript8414.chr17.nic	protein_coding	82228991,82235983,82236729,82237138,82260899	82229106,82236231,82236872,82237893,82261129	Gene ID= ENSG00000141526.16 TPM= 2.63 Transcript Type= NA
chr17	82229042	82239476	82229042	82239476	+	transcript8415.chr17.nic@SLC16A3	transcript8415.chr17.nic	protein_coding	82229042,82235983,82236729,82237138	82229106,82236231,82236872,82239476	Gene ID= ENSG00000141526.16 TPM= 3.79 Transcript Type= NA
chr17	82229032	82239479	82229032	82239479	+	ENST00000582743.5@SLC16A3	ENST00000582743.5	protein_coding	82229032,82235983,82236729,82237138,82238702	82229106,82236231,82236872,82237893,82239479	Gene ID= ENSG00000141526.16 TPM= 65.09 Transcript Type= protein_coding
chr17	82244362	82273737	82244362	82273737	-	transcript8402.chr17.nic@CSNK1D	transcript8402.chr17.nic	protein_coding	82273306,82265686,82255429,82253016,82252434,82251379,82249431,82248875,82245976,82244362	82273737,82265796,82255577,82253244,82252604,82251527,82250179,82249014,82246039,82244831	Gene ID= ENSG00000141551.14 TPM= 4.18 Transcript Type= NA
chr17	82244362	82273697	82244362	82273697	-	transcript8407.chr17.nic@CSNK1D	transcript8407.chr17.nic	protein_coding	82273306,82255429,82253016,82252434,82251379,82249431,82248875,82245976,82244362	82273697,82255577,82253244,82252604,82251527,82249602,82249014,82246039,82244831	Gene ID= ENSG00000141551.14 TPM= 4.18 Transcript Type= NA
chr17	82239727	82273428	82239727	82273428	-	ENST00000398519.9@CSNK1D	ENST00000398519.9	protein_coding	82273306,82265686,82255429,82253016,82252434,82251379,82249431,82248875,82239727	82273428,82265796,82255577,82253244,82252604,82251527,82249602,82249014,82240062	Gene ID= ENSG00000141551.14 TPM= 2.63 Transcript Type= protein_coding
chr17	82244362	82273697	82244362	82273697	-	ENST00000392334.6@CSNK1D	ENST00000392334.6	protein_coding	82273306,82265686,82255429,82253016,82252434,82251379,82249431,82248875,82245976,82244362	82273697,82265796,82255577,82253244,82252604,82251527,82249602,82249014,82246039,82244831	Gene ID= ENSG00000141551.14 TPM= 29.87 Transcript Type= protein_coding
chr17	82242671	82246083	82242671	82246083	-	transcript8426.chr17.nnic@NA	transcript8426.chr17.nnic	NA	82242671	82246083	Gene ID= novel_gene_chr17_8427 TPM= 38.53 Transcript Type= NA
chr17	82244349	82251128	82244349	82251128	-	transcript8428.chr17.nnic@NA	transcript8428.chr17.nnic	NA	82244349	82251128	Gene ID= novel_gene_chr17_8429 TPM= 5.84 Transcript Type= NA
chr17	82314870	82317602	82314870	82317602	-	ENST00000312648.7@CD7	ENST00000312648.7	protein_coding	82317414,82316667,82316195,82314870	82317602,82316981,82316409,82315431	Gene ID= ENSG00000173762.7 TPM= 4.67 Transcript Type= protein_coding
chr17	82353353	82357193	82353353	82357193	-	transcript8440.chr17.nnic@NA	transcript8440.chr17.nnic	NA	82353353	82357193	Gene ID= novel_gene_chr17_8441 TPM= 2.34 Transcript Type= NA
chr17	82389223	82418637	82389223	82418637	-	ENST00000313056.9@OGFOD3	ENST00000313056.9	protein_coding	82418412,82415398,82411455,82409368,82406418,82405324,82403937,82398196,82389223	82418637,82415627,82411530,82409410,82406482,82405380,82404090,82398319,82392534	Gene ID= ENSG00000181396.12 TPM= 10.51 Transcript Type= protein_coding
chr17	82418347	82442645	82418347	82442645	+	transcript8447.chr17.nic@HEXDC	transcript8447.chr17.nic	protein_coding	82418347,82419749,82424394,82428558,82433658,82435689,82436667,82437168,82439631,82440473,82440997,82441165,82441800,82442177	82418740,82419883,82424503,82428645,82433822,82435872,82436738,82437363,82439713,82440613,82441075,82441266,82441889,82442645	Gene ID= ENSG00000169660.15 TPM= 6.12 Transcript Type= NA
chr17	82418347	82442645	82418347	82442645	+	transcript8448.chr17.nic@HEXDC	transcript8448.chr17.nic	protein_coding	82418347,82419749,82424394,82428558,82433658,82435689,82436667,82437168,82439631,82440473,82440997,82441165,82441800,82442177	82418740,82419883,82424503,82428645,82433822,82435872,82436738,82437363,82440334,82440613,82441075,82441266,82441889,82442645	Gene ID= ENSG00000169660.15 TPM= 8.45 Transcript Type= NA
chr17	82418347	82442645	82418347	82442645	+	transcript8453.chr17.nic@HEXDC	transcript8453.chr17.nic	protein_coding	82418347,82419749,82424394,82428558,82433658,82435689,82436667,82437168,82439631,82440997,82441165,82441800,82442177	82418740,82419883,82424503,82428645,82433822,82435872,82436738,82437363,82439713,82441075,82441266,82441889,82442645	Gene ID= ENSG00000169660.15 TPM= 25.78 Transcript Type= NA
chr17	82418347	82442645	82418347	82442645	+	transcript8454.chr17.nic@HEXDC	transcript8454.chr17.nic	protein_coding	82418347,82419749,82424394,82428558,82433658,82435689,82436667,82437168,82439631,82440997,82441165,82441800,82442177	82418740,82419883,82424503,82428645,82433822,82435872,82436738,82437363,82440334,82441075,82441266,82441889,82442645	Gene ID= ENSG00000169660.15 TPM= 12.35 Transcript Type= NA
chr17	82418347	82442645	82418347	82442645	+	transcript8455.chr17.nic@HEXDC	transcript8455.chr17.nic	protein_coding	82418347,82419749,82424394,82428558,82433658,82435689,82436667,82437168,82439631,82440997,82441165,82441800,82442177	82418740,82419883,82424503,82428645,82433822,82435872,82436738,82437363,82440613,82441075,82441266,82441889,82442645	Gene ID= ENSG00000169660.15 TPM= 5.35 Transcript Type= NA
chr17	82418347	82442645	82418347	82442645	+	transcript8456.chr17.nic@HEXDC	transcript8456.chr17.nic	protein_coding	82418347,82419749,82424394,82428558,82433658,82435689,82436667,82439631,82440473,82440997,82441165,82441800,82442177	82418740,82419883,82424503,82428645,82433822,82435872,82437363,82440334,82440613,82441075,82441266,82441889,82442645	Gene ID= ENSG00000169660.15 TPM= 8.45 Transcript Type= NA
chr17	82418318	82442645	82418318	82442645	+	ENST00000337014.10@HEXDC	ENST00000337014.10	protein_coding	82418318,82419749,82424394,82428558,82433658,82435689,82436667,82437168,82439631,82440997,82441800,82442177	82418740,82419883,82424503,82428645,82433822,82435872,82436738,82437363,82439713,82441266,82441889,82442645	Gene ID= ENSG00000169660.15 TPM= 3.6 Transcript Type= protein_coding
chr17	82418347	82442645	82418347	82442645	+	transcript8461.chr17.nic@HEXDC	transcript8461.chr17.nic	protein_coding	82418347,82419749,82424394,82428558,82433658,82435689,82436667,82439631,82440997,82441165,82441800,82442177	82418740,82419883,82424503,82428645,82433822,82435872,82437363,82440613,82441075,82441266,82441889,82442645	Gene ID= ENSG00000169660.15 TPM= 6.52 Transcript Type= NA
chr17	82418347	82442645	82418347	82442645	+	transcript8465.chr17.nic@HEXDC	transcript8465.chr17.nic	protein_coding	82418347,82419749,82424394,82428558,82433658,82435689,82436667,82439631,82440997,82441800,82442177	82418740,82419883,82424503,82428645,82433822,82435872,82437363,82440334,82441266,82441889,82442645	Gene ID= ENSG00000169660.15 TPM= 3.6 Transcript Type= NA
chr17	82418697	82442641	82418697	82442641	+	ENST00000577944.5@HEXDC	ENST00000577944.5	protein_coding	82418697,82419749,82424394,82428558,82433658,82435689,82436667,82437168,82439631,82440997,82441153,82441800,82442177	82418740,82419883,82424503,82428645,82433822,82435872,82436738,82437363,82439713,82441070,82441266,82441889,82442641	Gene ID= ENSG00000169660.15 TPM= 2.34 Transcript Type= protein_coding
chr17	82440428	82443626	82440428	82443626	-	transcript8517.chr17.nnic@NA	transcript8517.chr17.nnic	NA	82440428	82443626	Gene ID= novel_gene_chr17_8518 TPM= 3.5 Transcript Type= NA
chr17	82442644	82450709	82442644	82450709	-	ENST00000437807.6@C17orf62	ENST00000437807.6	protein_coding	82450480,82449431,82449170,82447580,82446623,82445864,82444447,82442644	82450709,82449480,82449292,82447621,82446696,82445960,82444591,82444124	Gene ID= ENSG00000178927.17 TPM= 18.45 Transcript Type= protein_coding
chr17	82442643	82450829	82442643	82450829	-	ENST00000306645.9@C17orf62	ENST00000306645.9	protein_coding	82450700,82449170,82447580,82446623,82445864,82444447,82442643	82450829,82449292,82447621,82446696,82445960,82444591,82444124	Gene ID= ENSG00000178927.17 TPM= 153.89 Transcript Type= protein_coding
chr17	82442644	82450829	82442644	82450829	-	ENST00000434650.6@C17orf62	ENST00000434650.6	protein_coding	82450700,82449170,82446623,82445864,82444447,82442644	82450829,82449292,82446696,82445960,82444591,82444124	Gene ID= ENSG00000178927.17 TPM= 14.95 Transcript Type= protein_coding
chr17	82442643	82450776	82442643	82450776	-	transcript8507.chr17.nic@C17orf62	transcript8507.chr17.nic	protein_coding	82450700,82449170,82447580,82446623,82444447,82442643	82450776,82449292,82447621,82446696,82445960,82444124	Gene ID= ENSG00000178927.17 TPM= 7.24 Transcript Type= NA
chr17	82442589	82450770	82442589	82450770	-	ENST00000342572.12@C17orf62	ENST00000342572.12	protein_coding	82450700,82445864,82444447,82442589	82450770,82445960,82444591,82444124	Gene ID= ENSG00000178927.17 TPM= 9.89 Transcript Type= protein_coding
chr17	82442642	82447403	82442642	82447403	-	transcript8519.chr17.nnic@NA	transcript8519.chr17.nnic	NA	82442642	82447403	Gene ID= novel_gene_chr17_8520 TPM= 15.18 Transcript Type= NA
chr17	82453170	82458491	82453170	82458491	-	transcript8553.chr17.nic@AC132938.3	transcript8553.chr17.nic	antisense_RNA	82457673,82457438,82453170	82458491,82457548,82454413	Gene ID= ENSG00000265458.1 TPM= 4.67 Transcript Type= NA
chr17	82458185	82488255	82458185	82488255	+	ENST00000390006.8@NARF	ENST00000390006.8	protein_coding	82458185,82459992,82464287,82468764,82472564,82478800,82481082,82483716,82484813,82485497,82487916	82458508,82460072,82464430,82468896,82472698,82478918,82481211,82483779,82484950,82485654,82488255	Gene ID= ENSG00000141562.17 TPM= 12.84 Transcript Type= protein_coding
chr17	82458181	82488259	82458181	82488259	+	transcript8541.chr17.nic@NARF	transcript8541.chr17.nic	protein_coding	82458181,82459992,82464287,82468764,82472564,82478800,82481082,82483716,82485497,82487916	82458508,82460072,82464430,82468896,82472698,82478918,82481211,82484950,82485654,82488259	Gene ID= ENSG00000141562.17 TPM= 4.67 Transcript Type= NA
chr17	82458200	82488259	82458200	82488259	+	transcript8548.chr17.nic@NARF	transcript8548.chr17.nic	protein_coding	82458200,82464287,82468764,82472564,82478800,82481082,82483716,82485497,82487916	82460072,82464430,82468896,82472698,82478918,82481211,82484950,82485654,82488259	Gene ID= ENSG00000141562.17 TPM= 3.5 Transcript Type= NA
chr17	82458703	82488215	82458703	82488215	+	ENST00000457415.7@NARF	ENST00000457415.7	protein_coding	82458703,82459992,82464287,82468764,82472564,82478800,82480407,82481082,82483716,82484813,82485497,82487916	82458830,82460072,82464430,82468896,82472698,82478918,82480544,82481211,82483779,82484950,82485654,82488215	Gene ID= ENSG00000141562.17 TPM= 1.17 Transcript Type= protein_coding
chr17	82458712	82488259	82458712	82488259	+	ENST00000577812.5@NARF	ENST00000577812.5	protein_coding	82458712,82459992,82464287,82468764,82472564,82478800,82481082,82483716,82485497,82487916	82458830,82460072,82464430,82468896,82472698,82478918,82481211,82484950,82485654,82488259	Gene ID= ENSG00000141562.17 TPM= 11.68 Transcript Type= retained_intron
chr17	82622058	82626556	82622058	82626556	+	transcript8578.chr17.nnic@FOXK2	transcript8578.chr17.nnic	protein_coding	82622058,82624925,82626505	82623430,82625940,82626556	Gene ID= ENSG00000141568.20 TPM= 2.34 Transcript Type= NA
chr17	82598939	82603182	82598939	82603182	+	ENST00000624186.1@FOXK2	ENST00000624186.1	protein_coding	82598939	82603182	Gene ID= ENSG00000141568.20 TPM= 5.84 Transcript Type= TEC
chr17	82519715	82604607	82519715	82604607	+	ENST00000335255.9@FOXK2	ENST00000335255.9	protein_coding	82519715,82563354,82568054,82571724,82582741,82584013,82585904,82587063,82601303	82520307,82563548,82568201,82571870,82582934,82584188,82586200,82587272,82604607	Gene ID= ENSG00000141568.20 TPM= 38.53 Transcript Type= protein_coding
chr17	82586130	82587562	82586130	82587562	+	ENST00000575578.1@FOXK2	ENST00000575578.1	protein_coding	82586130,82587063	82586200,82587562	Gene ID= ENSG00000141568.20 TPM= 1.17 Transcript Type= protein_coding
chr17	82581480	82582340	82581480	82582340	-	transcript8585.chr17.nnic@NA	transcript8585.chr17.nnic	NA	82581480	82582340	Gene ID= novel_gene_chr17_8586 TPM= 4.67 Transcript Type= NA
chr17	82614576	82648443	82614576	82648443	-	transcript8567.chr17.nic@WDR45B	transcript8567.chr17.nic	protein_coding	82648274,82643949,82627204,82625389,82621609,82619043,82617296,82616524,82614576	82648443,82644023,82627291,82625483,82621799,82619128,82617397,82616645,82616025	Gene ID= ENSG00000141580.15 TPM= 19.27 Transcript Type= NA
chr17	82614576	82626558	82614576	82626558	-	transcript8573.chr17.nic@WDR45B	transcript8573.chr17.nic	protein_coding	82625587,82625389,82621609,82619043,82617296,82616524,82614576	82626558,82625483,82621799,82619128,82617397,82616645,82616025	Gene ID= ENSG00000141580.15 TPM= 19.27 Transcript Type= NA
chr17	82654973	82698728	82654973	82698728	-	ENST00000571995.5@RAB40B	ENST00000571995.5	protein_coding	82698455,82664496,82660987,82659580,82658491,82654973	82698728,82664556,82661047,82659657,82658713,82658134	Gene ID= ENSG00000141542.10 TPM= 14.01 Transcript Type= protein_coding
chr17	82716683	82728017	82716683	82728017	+	ENST00000269373.10@FN3KRP	ENST00000269373.10	protein_coding	82716683,82718906,82720272,82722804,82726480,82726833	82716896,82719057,82720363,82722886,82726602,82728017	Gene ID= ENSG00000141560.14 TPM= 80.56 Transcript Type= protein_coding
chr17	82752063	82942704	82752063	82942704	+	transcript8608.chr17.nnic@TBCD	transcript8608.chr17.nnic	protein_coding	82752063,82756165,82763965,82766267,82768420,82772452,82781589,82783461,82797757,82800864,82805875,82807608,82809708,82814840,82870224,82884145,82889668,82893547,82900651,82903405,82905936,82907761,82909285,82911758,82920556,82921501,82923652,82924939,82926400,82927186,82927905,82929113,82929362,82930522,82932658,82937271,82938049,82939367,82941399,82942449	82752377,82756215,82764062,82766368,82768566,82772507,82781721,82783714,82797802,82800996,82806011,82807668,82809782,82814934,82870380,82884202,82889697,82893632,82900731,82903478,82906053,82907821,82909307,82911789,82920618,82921577,82923733,82925057,82926491,82927323,82927988,82929271,82929500,82930643,82932735,82937360,82938136,82939476,82941483,82942704	Gene ID= ENSG00000141556.20 TPM= 7.47 Transcript Type= NA
chr17	82752062	82942704	82752062	82942704	+	transcript8620.chr17.nic@TBCD	transcript8620.chr17.nic	protein_coding	82752062,82756165,82763965,82766267,82768420,82772452,82781589,82797757,82800864,82805875,82807608,82809708,82814840,82870224,82884145,82889668,82893547,82900651,82903405,82905936,82907761,82909285,82911758,82920556,82921501,82923652,82924939,82926400,82927186,82927905,82929113,82929362,82932658,82937271,82938049,82939367,82941399,82942449	82752377,82756215,82764062,82766368,82768566,82772507,82781721,82797802,82800996,82806011,82807668,82809782,82814934,82870380,82884202,82889697,82893632,82900731,82903478,82906053,82907821,82909307,82911789,82920618,82921577,82923733,82925057,82926491,82927323,82927988,82929271,82930643,82932735,82937360,82938136,82939476,82941483,82942704	Gene ID= ENSG00000141556.20 TPM= 6.56 Transcript Type= NA
chr17	82875535	82942704	82875535	82942704	+	transcript8638.chr17.nnic@TBCD	transcript8638.chr17.nnic	protein_coding	82875535,82876781,82884145,82889668,82893547,82900651,82903405,82905936,82907761,82909285,82911758,82920556,82921501,82923652,82924939,82926400,82927186,82927905,82929113,82929362,82930522,82932658,82937271,82938049,82939367,82941399,82942449	82875850,82876981,82884202,82889697,82893632,82900731,82903478,82906053,82907821,82909307,82911789,82920618,82921577,82923733,82925057,82926491,82927323,82927988,82929271,82929500,82930643,82932735,82937360,82938136,82939476,82941483,82942704	Gene ID= ENSG00000141556.20 TPM= 12.14 Transcript Type= NA
chr17	82883219	82942704	82883219	82942704	+	transcript8645.chr17.nnic@TBCD	transcript8645.chr17.nnic	protein_coding	82883219,82884145,82889668,82893547,82900651,82903405,82905936,82907761,82909285,82911758,82920556,82921501,82923652,82924939,82926400,82927186,82927905,82929113,82929362,82930522,82932658,82937271,82938049,82939367,82941399,82942449	82883627,82884202,82889697,82893632,82900731,82903478,82906053,82907821,82909307,82911789,82920618,82921577,82923733,82925057,82926491,82927323,82927988,82929271,82929500,82930643,82932735,82937360,82938136,82939476,82941483,82942704	Gene ID= ENSG00000141556.20 TPM= 6.31 Transcript Type= NA
chr17	82890553	82942704	82890553	82942704	+	transcript8652.chr17.nnic@TBCD	transcript8652.chr17.nnic	protein_coding	82890553,82893547,82900651,82903405,82905936,82907761,82909285,82911758,82920556,82921501,82923652,82924939,82926400,82927186,82927905,82929113,82929362,82930522,82932658,82937271,82938049,82939367,82941399,82942449	82891490,82893632,82900731,82903478,82906053,82907821,82909307,82911789,82920618,82921577,82923733,82925057,82926491,82927323,82927988,82929271,82929500,82930643,82932735,82937360,82938136,82939476,82941483,82942704	Gene ID= ENSG00000141556.20 TPM= 6.07 Transcript Type= NA
chr17	82890689	82942704	82890689	82942704	+	transcript8654.chr17.nnic@TBCD	transcript8654.chr17.nnic	protein_coding	82890689,82893547,82900651,82903405,82905936,82907761,82909285,82911758,82920556,82921501,82923652,82924939,82926400,82927186,82927905,82929113,82929362,82930522,82932658,82937271,82938049,82939367,82941399,82942449	82891713,82893632,82900731,82903478,82906053,82907821,82909307,82911789,82920618,82921577,82923733,82925057,82926491,82927323,82927988,82929271,82929500,82930643,82932735,82937360,82938136,82939476,82941483,82942704	Gene ID= ENSG00000141556.20 TPM= 7.24 Transcript Type= NA
chr17	82829435	82840578	82829435	82840578	-	ENST00000269394.3@ZNF750	ENST00000269394.3	protein_coding	82839927,82831019,82829435	82840578,82832636,82830877	Gene ID= ENSG00000141579.6 TPM= 7.01 Transcript Type= protein_coding
chr17	82857748	82861043	82857748	82861043	-	transcript8673.chr17.nnic@NA	transcript8673.chr17.nnic	NA	82857748	82861043	Gene ID= novel_gene_chr17_8674 TPM= 3.5 Transcript Type= NA
chr17	82917026	82922117	82917026	82922117	-	transcript8671.chr17.nnic@NA	transcript8671.chr17.nnic	NA	82917026	82922117	Gene ID= novel_gene_chr17_8672 TPM= 3.5 Transcript Type= NA
chr17	82943791	83051810	82943791	83051810	-	ENST00000320865.3@B3GNTL1	ENST00000320865.3	protein_coding	83051737,83048669,83048471,83035035,83014454,83005115,82965651,82961057,82957359,82957181,82956695,82946879,82943791	83051810,83048785,83048570,83035099,83014519,83005210,82965746,82961181,82957494,82957249,82956769,82946983,82944049	Gene ID= ENSG00000175711.8 TPM= 2.34 Transcript Type= protein_coding
chr17	83079691	83095119	83079691	83095119	+	ENST00000320095.11@METRNL	ENST00000320095.11	protein_coding	83079691,83084938,83093167,83094256	83079985,83085323,83093226,83095119	Gene ID= ENSG00000176845.12 TPM= 2.34 Transcript Type= protein_coding
chr17	83104866	83106828	83104866	83106828	+	transcript8685.chr17.nnic@NA	transcript8685.chr17.nnic	NA	83104866	83106828	Gene ID= novel_gene_chr17_8686 TPM= 3.5 Transcript Type= NA
chr18	158568	212048	158568	212048	+	transcript17.chr18.nic@USP14	transcript17.chr18.nic	protein_coding	158568,163308,166787,178933,180236,192842,196637,197616,198047,199202,202880,203098,204564,209971,211133	158714,163453,166819,179037,180339,192900,196767,197696,198132,199316,202945,203190,204692,210493,212048	Gene ID= ENSG00000101557.14 TPM= 3.5 Transcript Type= NA
chr18	158608	214629	158608	214629	+	ENST00000261601.7@USP14	ENST00000261601.7	protein_coding	158608,163308,166787,178933,180236,192842,196637,197616,198047,199202,202880,203098,204564,209971,210386,211133	158714,163453,166819,179037,180339,192900,196767,197696,198132,199316,202945,203190,204692,210031,210493,214629	Gene ID= ENSG00000101557.14 TPM= 18.68 Transcript Type= protein_coding
chr18	214521	268027	214521	268027	-	ENST00000261600.10@THOC1	ENST00000261600.10	protein_coding	267966,265457,265303,264026,260186,259682,259180,254273,252539,247849,246324,226801,225337,225089,224924,224084,223440,218886,216486,215429,214521	268027,265530,265363,264092,260304,259730,259275,254355,252612,247957,246455,226901,225403,225139,224994,224179,223505,218969,216633,215504,214921	Gene ID= ENSG00000079134.11 TPM= 11.68 Transcript Type= protein_coding
chr18	319361	500722	319361	500722	-	ENST00000582147.1@COLEC12	ENST00000582147.1	protein_coding	500508,480707,357400,348065,346295,333007,331668,321662,319361	500722,480757,357522,348163,347341,335230,331777,321807,320064	Gene ID= ENSG00000158270.11 TPM= 11.68 Transcript Type= retained_intron
chr18	657604	673578	657604	673578	+	ENST00000323274.14@TYMS	ENST00000323274.14	protein_coding	657604,659641,662146,669072,670692,671380,672860	657947,659714,662320,669173,670867,671451,673578	Gene ID= ENSG00000176890.15 TPM= 1.17 Transcript Type= protein_coding
chr18	673859	712676	673859	712676	-	ENST00000251101.11@ENOSF1	ENST00000251101.11	protein_coding	712504,706470,697240,694248,693882,691204,691068,690549,688574,685921,683246,678696,677743,677345,675321,673859	712676,706578,697355,694334,693908,691276,691106,690631,688608,686008,683380,678737,677872,677444,675402,674406	Gene ID= ENSG00000132199.18 TPM= 8.17 Transcript Type= protein_coding
chr18	693326	712674	693326	712674	-	transcript84.chr18.nic@ENOSF1	transcript84.chr18.nic	protein_coding	712504,706470,697240,694248,693326	712674,706578,697355,694334,693908	Gene ID= ENSG00000132199.18 TPM= 2.34 Transcript Type= NA
chr18	691895	694640	691895	694640	+	transcript91.chr18.nnic@NA	transcript91.chr18.nnic	NA	691895	694640	Gene ID= novel_gene_chr18_92 TPM= 10.51 Transcript Type= NA
chr18	699748	702284	699748	702284	+	transcript93.chr18.nnic@NA	transcript93.chr18.nnic	NA	699748	702284	Gene ID= novel_gene_chr18_94 TPM= 7.01 Transcript Type= NA
chr18	721588	812546	721588	812546	-	ENST00000584307.5@YES1	ENST00000584307.5	protein_coding	812384,756557,751705,747920,745948,745708,743260,742918,739735,736808,732834,721588	812546,756835,751804,748018,746051,745857,743415,743097,739811,736961,732965,724632	Gene ID= ENSG00000176105.13 TPM= 7.01 Transcript Type= protein_coding
chr18	721748	812238	721748	812238	-	ENST00000314574.4@YES1	ENST00000314574.4	protein_coding	812114,756557,751705,747920,745948,745708,743260,742918,739735,736808,732834,721748	812238,756835,751804,748018,746051,745857,743415,743097,739811,736961,732965,724632	Gene ID= ENSG00000176105.13 TPM= 75.89 Transcript Type= protein_coding
chr18	905109	912172	905109	912172	+	ENST00000579794.1@ADCYAP1	ENST00000579794.1	protein_coding	905109,907659,908265,909446	905496,907790,908363,912172	Gene ID= ENSG00000141433.12 TPM= 1.17 Transcript Type= protein_coding
chr18	2537525	2571509	2537525	2571509	-	ENST00000319888.10@METTL4	ENST00000319888.10	protein_coding	2571149,2566821,2563797,2554669,2552695,2547355,2544653,2537525	2571509,2567654,2563859,2555038,2552764,2547529,2544759,2539145	Gene ID= ENSG00000101574.14 TPM= 1.17 Transcript Type= protein_coding
chr18	2655738	2805017	2655738	2805017	+	ENST00000320876.10@SMCHD1	ENST00000320876.10	protein_coding	2655738,2666157,2666870,2673281,2674015,2688394,2688628,2694527,2697032,2697831,2700539,2700735,2703692,2705694,2706364,2707563,2707807,2718158,2718315,2722519,2724899,2726452,2728457,2729275,2732265,2738397,2739432,2740703,2743761,2747522,2750043,2750350,2751278,2752488,2760652,2762105,2763637,2769694,2769989,2771533,2772250,2775734,2777806,2778169,2784450,2795949,2796407,2802528	2656261,2666232,2667031,2673363,2674145,2688508,2688747,2694693,2697122,2698041,2700659,2700918,2703886,2705807,2706470,2707645,2707920,2718235,2718434,2722663,2724995,2726524,2728596,2729409,2732492,2738545,2739520,2740821,2743928,2747647,2750122,2750507,2751393,2752552,2760739,2762236,2763789,2769820,2770108,2771618,2772372,2775924,2777915,2778239,2784621,2796107,2796521,2805017	Gene ID= ENSG00000101596.14 TPM= 7.01 Transcript Type= protein_coding
chr18	2846959	2914041	2846959	2914041	+	transcript108.chr18.nnic@EMILIN2	transcript108.chr18.nnic	protein_coding	2846959,2847809,2884964,2890561,2892242,2906783,2908943,2909691,2913067	2847322,2847931,2885139,2892062,2892486,2907085,2908975,2909819,2914041	Gene ID= ENSG00000132205.10 TPM= 5.84 Transcript Type= NA
chr18	2847030	2915993	2847030	2915993	+	ENST00000254528.3@EMILIN2	ENST00000254528.3	protein_coding	2847030,2847809,2884964,2890561,2906783,2908943,2909691,2913067	2847322,2847931,2885139,2892486,2907085,2908975,2909819,2915993	Gene ID= ENSG00000132205.10 TPM= 7.01 Transcript Type= protein_coding
chr18	2916994	3013340	2916994	3013340	-	transcript107.chr18.nic@LPIN2	transcript107.chr18.nic	protein_coding	3013087,2960649,2954504,2951055,2940605,2939480,2937692,2934351,2931256,2929065,2928591,2927722,2926723,2925224,2924398,2923775,2922047,2921533,2920778,2916994	3013340,2960849,2954599,2951356,2940712,2939603,2938037,2934450,2931443,2929158,2928660,2927811,2926805,2925368,2924546,2923861,2922199,2921647,2920881,2920437	Gene ID= ENSG00000101577.9 TPM= 40.87 Transcript Type= NA
chr18	2918596	2922365	2918596	2922365	+	transcript125.chr18.nnic@NA	transcript125.chr18.nnic	NA	2918596	2922365	Gene ID= novel_gene_chr18_126 TPM= 2.34 Transcript Type= NA
chr18	2981299	2986561	2981299	2986561	+	transcript123.chr18.nnic@NA	transcript123.chr18.nnic	NA	2981299	2986561	Gene ID= novel_gene_chr18_124 TPM= 2.34 Transcript Type= NA
chr18	3118904	3137968	3118904	3137968	+	transcript131.chr18.nnic@NA	transcript131.chr18.nnic	NA	3118904,3119807,3135568	3119107,3120034,3137968	Gene ID= novel_gene_chr18_132 TPM= 2.34 Transcript Type= NA
chr18	3246400	3247381	3246400	3247381	-	transcript133.chr18.nnic@NA	transcript133.chr18.nnic	NA	3246400	3247381	Gene ID= novel_gene_chr18_134 TPM= 4.67 Transcript Type= NA
chr18	3247813	3256211	3247813	3256211	+	ENST00000578611.5@MYL12A	ENST00000578611.5	protein_coding	3247813,3249361,3253233,3253889,3255746	3247909,3249443,3253428,3254050,3256211	Gene ID= ENSG00000101608.12 TPM= 1.46 Transcript Type= protein_coding
chr18	3247530	3256236	3247530	3256236	+	ENST00000217652.7@MYL12A	ENST00000217652.7	protein_coding	3247530,3253233,3253889,3255746	3247909,3253428,3254050,3256236	Gene ID= ENSG00000101608.12 TPM= 681.38 Transcript Type= protein_coding
chr18	3247481	3256227	3247481	3256227	+	ENST00000579226.5@MYL12A	ENST00000579226.5	protein_coding	3247481,3253233,3253889,3255746	3247587,3253428,3254050,3256227	Gene ID= ENSG00000101608.12 TPM= 8.85 Transcript Type= protein_coding
chr18	3262956	3278284	3262956	3278284	+	ENST00000584539.1@MYL12B	ENST00000584539.1	protein_coding	3262956,3272884,3277253,3277765	3263138,3273082,3277414,3278284	Gene ID= ENSG00000118680.12 TPM= 5.84 Transcript Type= protein_coding
chr18	3262417	3278284	3262417	3278284	+	ENST00000581193.5@MYL12B	ENST00000581193.5	protein_coding	3262417,3272884,3277253,3277765	3262784,3273082,3277414,3278284	Gene ID= ENSG00000118680.12 TPM= 7.01 Transcript Type= protein_coding
chr18	3447609	3459978	3447609	3459978	+	ENST00000618001.4@TGIF1	ENST00000618001.4	protein_coding	3447609,3456354,3457365	3447797,3456580,3459978	Gene ID= ENSG00000177426.20 TPM= 1.17 Transcript Type= protein_coding
chr18	3449704	3458411	3449704	3458411	+	ENST00000343820.9@TGIF1	ENST00000343820.9	protein_coding	3449704,3456354,3457365	3450505,3456580,3458411	Gene ID= ENSG00000177426.20 TPM= 45.54 Transcript Type= protein_coding
chr18	3466276	3478978	3466276	3478978	+	transcript167.chr18.nic@GAPLINC	transcript167.chr18.nic	lincRNA	3466276,3467127,3473954,3478756	3466357,3467270,3474142,3478978	Gene ID= ENSG00000266835.5 TPM= 2.34 Transcript Type= NA
chr18	3466250	3473203	3466250	3473203	+	ENST00000581029.5@GAPLINC	ENST00000581029.5	lincRNA	3466250,3467127,3472843	3466357,3467270,3473203	Gene ID= ENSG00000266835.5 TPM= 1.17 Transcript Type= lincRNA
chr18	3466297	3478978	3466297	3478978	+	ENST00000579007.5@GAPLINC	ENST00000579007.5	lincRNA	3466297,3467127,3473954,3478756	3466357,3467296,3474142,3478978	Gene ID= ENSG00000266835.5 TPM= 2.34 Transcript Type= lincRNA
chr18	3466250	3478927	3466250	3478927	+	ENST00000581442.5@GAPLINC	ENST00000581442.5	lincRNA	3466250,3467127,3478756	3466357,3467296,3478927	Gene ID= ENSG00000266835.5 TPM= 3.5 Transcript Type= lincRNA
chr18	3594113	3597369	3594113	3597369	+	transcript171.chr18.nic@DLGAP1-AS1	transcript171.chr18.nic	antisense_RNA	3594113,3596579	3594484,3597369	Gene ID= ENSG00000177337.7 TPM= 2.34 Transcript Type= NA
chr18	3594454	3597375	3594454	3597375	+	transcript172.chr18.nnic@NA	transcript172.chr18.nnic	NA	3594454	3597375	Gene ID= novel_gene_chr18_173 TPM= 3.5 Transcript Type= NA
chr18	5238090	5245192	5238090	5245192	+	transcript198.chr18.nnic@LINC00667	transcript198.chr18.nnic	lincRNA	5238090,5241699,5243594	5239196,5241889,5245192	Gene ID= ENSG00000263753.6 TPM= 2.92 Transcript Type= NA
chr18	5237826	5239859	5237826	5239859	+	ENST00000581471.2@LINC00667	ENST00000581471.2	lincRNA	5237826	5239859	Gene ID= ENSG00000263753.6 TPM= 7.59 Transcript Type= lincRNA
chr18	5238100	5246508	5238100	5246508	+	ENST00000582008.5@LINC00667	ENST00000582008.5	lincRNA	5238100,5241699,5243594	5239049,5241812,5246508	Gene ID= ENSG00000263753.6 TPM= 1.17 Transcript Type= lincRNA
chr18	5238101	5243315	5238101	5243315	+	transcript206.chr18.nnic@NA	transcript206.chr18.nnic	NA	5238101	5243315	Gene ID= novel_gene_chr18_207 TPM= 3.5 Transcript Type= NA
chr18	5289813	5295702	5289813	5295702	-	transcript224.chr18.nic@ZBTB14	transcript224.chr18.nic	protein_coding	5293972,5293244,5289813	5295702,5293327,5292204	Gene ID= ENSG00000198081.10 TPM= 3.5 Transcript Type= NA
chr18	5289019	5296040	5289019	5296040	-	ENST00000357006.8@ZBTB14	ENST00000357006.8	protein_coding	5295813,5293972,5293244,5289019	5296040,5294001,5293327,5292204	Gene ID= ENSG00000198081.10 TPM= 1.17 Transcript Type= protein_coding
chr18	5392386	5543997	5392386	5543997	-	transcript235.chr18.nic@EPB41L3	transcript235.chr18.nic	protein_coding	5543913,5489001,5478241,5445140,5443838,5438035,5433903,5433469,5428313,5424262,5423378,5419711,5410566,5406777,5397058,5396201,5395609,5395067,5394677,5392386	5543997,5489194,5478438,5445244,5443880,5438110,5434121,5433556,5428465,5424359,5423553,5419877,5410619,5406968,5397426,5396332,5395707,5395147,5394793,5393478	Gene ID= ENSG00000082397.17 TPM= 4.67 Transcript Type= NA
chr18	5392386	5630687	5392386	5630687	-	transcript236.chr18.nic@EPB41L3	transcript236.chr18.nic	protein_coding	5630377,5489001,5478241,5445140,5443838,5438035,5433903,5433469,5428313,5424262,5423378,5419711,5410566,5406777,5397058,5396201,5395609,5395067,5394677,5392386	5630687,5489161,5478438,5445244,5443880,5438110,5434121,5433556,5428465,5424359,5423553,5419931,5410619,5406968,5397426,5396332,5395707,5395147,5394793,5393478	Gene ID= ENSG00000082397.17 TPM= 21.02 Transcript Type= NA
chr18	5392381	5630687	5392381	5630687	-	transcript240.chr18.nic@EPB41L3	transcript240.chr18.nic	protein_coding	5630377,5489001,5478241,5445140,5443838,5438035,5433903,5433469,5428313,5424262,5423378,5419711,5410566,5406777,5397058,5396201,5395609,5395067,5392381	5630687,5489161,5478438,5445244,5443880,5438110,5434121,5433556,5428465,5424359,5423553,5419931,5410619,5406968,5397426,5396332,5395707,5395147,5393478	Gene ID= ENSG00000082397.17 TPM= 16.15 Transcript Type= NA
chr18	5392381	5544051	5392381	5544051	-	transcript241.chr18.nic@EPB41L3	transcript241.chr18.nic	protein_coding	5543913,5489001,5478241,5445140,5443838,5438035,5433903,5433469,5428313,5424262,5423378,5419711,5410566,5406777,5397058,5396201,5395609,5395067,5392381	5544051,5489194,5478438,5445244,5443880,5438110,5434121,5433556,5428465,5424359,5423553,5419931,5410619,5406968,5397426,5396332,5395707,5395147,5393478	Gene ID= ENSG00000082397.17 TPM= 9.14 Transcript Type= NA
chr18	5392386	5544216	5392386	5544216	-	transcript246.chr18.nnic@EPB41L3	transcript246.chr18.nnic	protein_coding	5543913,5489001,5478241,5445140,5443838,5438035,5433903,5433469,5428313,5424262,5423378,5419711,5410566,5406777,5397058,5396201,5395609,5394677,5392386	5544216,5489194,5478438,5445244,5443880,5438110,5434121,5433556,5428465,5424359,5423553,5419931,5410619,5406968,5397426,5396332,5395707,5394793,5393478	Gene ID= ENSG00000082397.17 TPM= 5.84 Transcript Type= NA
chr18	5542866	5544960	5542866	5544960	+	transcript252.chr18.nnic@NA	transcript252.chr18.nnic	NA	5542866	5544960	Gene ID= novel_gene_chr18_253 TPM= 3.5 Transcript Type= NA
chr18	5954706	6415300	5954706	6415300	-	transcript257.chr18.nnic@L3MBTL4	transcript257.chr18.nnic	protein_coding	6415203,6311998,6311554,6301903,6263947,6244484,6243294,6241358,6239718,6237964,6215750,6213149,6171828,6138194,6093355,6080881,5969393,5960094,5954706	6415300,6312056,6311656,6301957,6264038,6244588,6243429,6241449,6239872,6238040,6215835,6213259,6171942,6138296,6093528,6080951,5969562,5960156,5956387	Gene ID= ENSG00000154655.15 TPM= 2.34 Transcript Type= NA
chr18	5954706	6414911	5954706	6414911	-	ENST00000317931.11@L3MBTL4	ENST00000317931.11	protein_coding	6414801,6311998,6311554,6301903,6263947,6244484,6243294,6241358,6239718,6237964,6215750,6213149,6171828,6138194,6093355,6080881,5969393,5960094,5954706	6414911,6312056,6311656,6301957,6264038,6244588,6243429,6241449,6239872,6238040,6215835,6213259,6171942,6138296,6093528,6080951,5969562,5960156,5956387	Gene ID= ENSG00000154655.15 TPM= 4.67 Transcript Type= protein_coding
chr18	6462088	6463029	6462088	6463029	-	transcript268.chr18.nnic@AP005202.1	transcript268.chr18.nnic	transcribed_processed_pseudogene	6462774,6462088	6463029,6462512	Gene ID= ENSG00000235552.4 TPM= 17.51 Transcript Type= NA
chr18	6462144	6463010	6462144	6463010	-	ENST00000489915.1@AP005202.1	ENST00000489915.1	transcribed_processed_pseudogene	6462144	6463010	Gene ID= ENSG00000235552.4 TPM= 82.9 Transcript Type= transcribed_processed_pseudogene
chr18	7609522	7615935	7609522	7615935	-	transcript273.chr18.nnic@NA	transcript273.chr18.nnic	NA	7609522	7615935	Gene ID= novel_gene_chr18_274 TPM= 3.5 Transcript Type= NA
chr18	7774147	8406856	7774147	8406856	+	transcript276.chr18.nnic@PTPRM	transcript276.chr18.nnic	protein_coding	7774147,7838336,7888106,7906505,7926568,7949181,7955121,8069686,8076455,8085671,8088749,8113486,8114791,8143647,8244058,8247845,8253227,8296368,8314781,8319178,8343423,8370890,8376046,8376462,8378265,8379167,8380296,8384561,8387072,8394476,8406109	7774271,7838473,7888377,7906583,7926683,7949355,7955414,8069994,8076564,8085872,8088851,8113759,8114827,8143779,8244209,8247919,8253414,8296455,8314857,8319214,8343520,8371006,8376200,8376597,8378414,8379340,8380427,8384686,8387235,8394611,8406856	Gene ID= ENSG00000173482.16 TPM= 64.22 Transcript Type= NA
chr18	8609445	8639381	8609445	8639381	+	ENST00000329286.6@RAB12	ENST00000329286.6	protein_coding	8609445,8624938,8633189,8635533,8636253,8638149	8609953,8624998,8633327,8635622,8636357,8639381	Gene ID= ENSG00000206418.3 TPM= 10.51 Transcript Type= protein_coding
chr18	8620141	8622946	8620141	8622946	-	transcript283.chr18.nnic@NA	transcript283.chr18.nnic	NA	8620141	8622946	Gene ID= novel_gene_chr18_284 TPM= 15.18 Transcript Type= NA
chr18	8789674	8832778	8789674	8832778	+	ENST00000518815.1@MTCL1	ENST00000518815.1	protein_coding	8789674,8796232,8798097,8806893,8809448,8812979,8819047,8821467,8824699,8831607	8789722,8796462,8798291,8807060,8809561,8813233,8819259,8821498,8826232,8832778	Gene ID= ENSG00000168502.17 TPM= 3.5 Transcript Type= protein_coding
chr18	9102713	9134341	9102713	9134341	+	transcript288.chr18.nic@NDUFV2	transcript288.chr18.nic	protein_coding	9102713,9117838,9119326,9119474,9122513,9124874,9126831,9134186	9102797,9117903,9119388,9119590,9122681,9124996,9126907,9134341	Gene ID= ENSG00000178127.12 TPM= 3.5 Transcript Type= NA
chr18	9102630	9134345	9102630	9134345	+	ENST00000318388.10@NDUFV2	ENST00000318388.10	protein_coding	9102630,9117838,9119326,9119474,9122513,9124874,9126831,9134186	9102797,9117903,9119388,9119590,9122681,9124983,9126907,9134345	Gene ID= ENSG00000178127.12 TPM= 131.94 Transcript Type= protein_coding
chr18	9118816	9121753	9118816	9121753	+	transcript292.chr18.nic@AP005263.1	transcript292.chr18.nic	processed_transcript	9118816,9119474	9119388,9121753	Gene ID= ENSG00000265257.5 TPM= 7.01 Transcript Type= NA
chr18	9127498	9134330	9127498	9134330	+	transcript293.chr18.nnic@NA	transcript293.chr18.nnic	NA	9127498	9134330	Gene ID= novel_gene_chr18_294 TPM= 3.5 Transcript Type= NA
chr18	9135711	9137446	9135711	9137446	-	transcript328.chr18.nnic@NA	transcript328.chr18.nnic	NA	9135711	9137446	Gene ID= novel_gene_chr18_329 TPM= 4.67 Transcript Type= NA
chr18	9136751	9255236	9136751	9255236	+	transcript301.chr18.nic@ANKRD12	transcript301.chr18.nic	protein_coding	9136751,9182382,9195551,9204476,9208657,9211584,9216758,9221852,9254211	9136965,9182519,9195698,9204544,9208803,9211784,9216900,9221999,9255236	Gene ID= ENSG00000101745.16 TPM= 2.34 Transcript Type= NA
chr18	9136763	9256318	9136763	9256318	+	transcript318.chr18.nic@ANKRD12	transcript318.chr18.nic	protein_coding	9136763,9182382,9195551,9208657,9211584,9216758,9221852,9254211	9136965,9182519,9195698,9208803,9211784,9216900,9221999,9256318	Gene ID= ENSG00000101745.16 TPM= 2.72 Transcript Type= NA
chr18	9136989	9255236	9136989	9255236	+	transcript321.chr18.nic@ANKRD12	transcript321.chr18.nic	protein_coding	9136989,9182382,9195551,9208657,9211584,9216758,9221852,9254211	9137096,9182519,9195698,9208803,9211784,9216900,9221999,9255236	Gene ID= ENSG00000101745.16 TPM= 2.34 Transcript Type= NA
chr18	9334767	9402420	9334767	9402420	+	ENST00000262120.9@TWSG1	ENST00000262120.9	protein_coding	9334767,9337193,9359972,9396280,9399346	9334920,9337352,9360071,9396546,9402420	Gene ID= ENSG00000128791.11 TPM= 121.43 Transcript Type= protein_coding
chr18	9475516	9537603	9475516	9537603	+	transcript344.chr18.nnic@RALBP1	transcript344.chr18.nnic	protein_coding	9475516,9516845,9522160,9524594,9525720,9530834,9533335,9533703,9535671	9475691,9517303,9522509,9524755,9525851,9530941,9533456,9533826,9537603	Gene ID= ENSG00000017797.12 TPM= 25.69 Transcript Type= NA
chr18	9474970	9517097	9474970	9517097	+	transcript350.chr18.nic@RALBP1	transcript350.chr18.nic	protein_coding	9474970,9512991,9516845	9475176,9513289,9517097	Gene ID= ENSG00000017797.12 TPM= 3.5 Transcript Type= NA
chr18	9487174	9492168	9487174	9492168	-	transcript355.chr18.nnic@NA	transcript355.chr18.nnic	NA	9487174	9492168	Gene ID= novel_gene_chr18_356 TPM= 4.67 Transcript Type= NA
chr18	9546910	9614874	9546910	9614874	-	transcript363.chr18.nic@PPP4R1	transcript363.chr18.nic	protein_coding	9614478,9614226,9595018,9593768,9588711,9588089,9584721,9584515,9583117,9577064,9570157,9563378,9562922,9561980,9559419,9557221,9553322,9550278,9550052,9549197,9546910	9614874,9614270,9595102,9593874,9588853,9588235,9584828,9584580,9583275,9577191,9570683,9563550,9563046,9562075,9559604,9557382,9553422,9550398,9550186,9549338,9547952	Gene ID= ENSG00000154845.15 TPM= 14.01 Transcript Type= NA
chr18	9546910	9614841	9546910	9614841	-	transcript391.chr18.nic@PPP4R1	transcript391.chr18.nic	protein_coding	9614478,9614226,9595018,9588711,9588089,9584721,9584515,9583117,9577064,9570157,9563378,9561980,9559419,9557221,9553322,9550278,9550052,9549197,9546910	9614841,9614270,9595102,9588853,9588235,9584828,9584580,9583275,9577191,9570683,9563550,9562075,9559604,9557382,9553422,9550398,9550186,9549338,9547952	Gene ID= ENSG00000154845.15 TPM= 7.39 Transcript Type= NA
chr18	9546791	9614569	9546791	9614569	-	ENST00000400555.7@PPP4R1	ENST00000400555.7	protein_coding	9614478,9614226,9595018,9593768,9588711,9588089,9584721,9584515,9583117,9577064,9570157,9563378,9561980,9559419,9557221,9553322,9550278,9550052,9549197,9546791	9614569,9614270,9595102,9593874,9588853,9588235,9584828,9584580,9583275,9577191,9570683,9563550,9562075,9559604,9557382,9553422,9550398,9550186,9549338,9547952	Gene ID= ENSG00000154845.15 TPM= 35.41 Transcript Type= protein_coding
chr18	9546791	9614558	9546791	9614558	-	ENST00000400556.7@PPP4R1	ENST00000400556.7	protein_coding	9614478,9614226,9595018,9593768,9588711,9588089,9584721,9584515,9583117,9577064,9570157,9563378,9561980,9559419,9557221,9553322,9550278,9550052,9549197,9546791	9614558,9614270,9595153,9593874,9588853,9588235,9584828,9584580,9583275,9577191,9570683,9563550,9562075,9559604,9557382,9553422,9550398,9550186,9549338,9547952	Gene ID= ENSG00000154845.15 TPM= 15.56 Transcript Type= protein_coding
chr18	9708165	9862551	9708165	9862551	+	ENST00000578921.5@RAB31	ENST00000578921.5	protein_coding	9708165,9775278,9792154,9814020,9815116,9845582,9859228	9708444,9775357,9792235,9814091,9815222,9845691,9862551	Gene ID= ENSG00000168461.12 TPM= 87.57 Transcript Type= protein_coding
chr18	9708303	9710857	9708303	9710857	+	transcript412.chr18.nnic@NA	transcript412.chr18.nnic	NA	9708303	9710857	Gene ID= novel_gene_chr18_413 TPM= 7.01 Transcript Type= NA
chr18	9715416	9718011	9715416	9718011	-	transcript416.chr18.nnic@NA	transcript416.chr18.nnic	NA	9715416	9718011	Gene ID= novel_gene_chr18_417 TPM= 2.34 Transcript Type= NA
chr18	9782167	9786157	9782167	9786157	+	transcript414.chr18.nnic@NA	transcript414.chr18.nnic	NA	9782167	9786157	Gene ID= novel_gene_chr18_415 TPM= 2.34 Transcript Type= NA
chr18	9864437	9866817	9864437	9866817	-	transcript418.chr18.nnic@NA	transcript418.chr18.nnic	NA	9864437	9866817	Gene ID= novel_gene_chr18_419 TPM= 3.5 Transcript Type= NA
chr18	9914002	9960021	9914002	9960021	+	ENST00000400000.6@VAPA	ENST00000400000.6	protein_coding	9914002,9931810,9936110,9936986,9950395,9954053	9914335,9931962,9936213,9937066,9950568,9960021	Gene ID= ENSG00000101558.13 TPM= 8.17 Transcript Type= protein_coding
chr18	9937220	9943534	9937220	9943534	-	transcript437.chr18.nnic@NA	transcript437.chr18.nnic	NA	9937220	9943534	Gene ID= novel_gene_chr18_438 TPM= 5.84 Transcript Type= NA
chr18	10454613	10488697	10454613	10488697	+	transcript451.chr18.nic@APCDD1	transcript451.chr18.nic	protein_coding	10454613,10471530,10485462,10487590	10455039,10472061,10485783,10488697	Gene ID= ENSG00000154856.12 TPM= 23.35 Transcript Type= NA
chr18	10526026	10552760	10526026	10552760	+	transcript453.chr18.nnic@NAPG	transcript453.chr18.nnic	protein_coding	10526026,10529001,10530770,10532711,10533536,10534466,10539762,10539988,10540329,10546326,10548299,10548967,10550077	10526158,10529045,10530837,10532795,10533553,10534496,10539871,10540054,10540399,10546404,10548378,10549096,10552760	Gene ID= ENSG00000134265.12 TPM= 8.17 Transcript Type= NA
chr18	10526034	10552760	10526034	10552760	+	ENST00000322897.10@NAPG	ENST00000322897.10	protein_coding	10526034,10530770,10532711,10533536,10534466,10539762,10539988,10540329,10546326,10548299,10548967,10550077	10526158,10530837,10532795,10533553,10534496,10539871,10540054,10540399,10546404,10548378,10549096,10552760	Gene ID= ENSG00000134265.12 TPM= 44.37 Transcript Type= protein_coding
chr18	11689233	11885678	11689233	11885678	+	transcript468.chr18.nnic@GNAL	transcript468.chr18.nnic	protein_coding	11689233,11752853,11753628,11753826,11824918,11862395,11864533,11867168,11868543,11872268,11876621,11880989,11883969	11689939,11752925,11753682,11753945,11825015,11862449,11864606,11867226,11868663,11872398,11876688,11882403,11885678	Gene ID= ENSG00000141404.15 TPM= 2.34 Transcript Type= NA
chr18	11688956	11885685	11688956	11885685	+	ENST00000334049.10@GNAL	ENST00000334049.10	protein_coding	11688956,11752853,11753628,11753826,11824918,11862395,11864533,11867168,11868543,11872268,11876621,11880989	11689939,11752925,11753682,11753945,11825015,11862449,11864606,11867226,11868663,11872398,11876688,11885685	Gene ID= ENSG00000141404.15 TPM= 3.5 Transcript Type= protein_coding
chr18	11851396	11854449	11851396	11854449	+	ENST00000526991.2@CHMP1B	ENST00000526991.2	protein_coding	11851396	11854449	Gene ID= ENSG00000255112.2 TPM= 19.85 Transcript Type= protein_coding
chr18	11883471	11908355	11883471	11908355	-	transcript471.chr18.nic@MPPE1	transcript471.chr18.nic	protein_coding	11908201,11906203,11905738,11897526,11896984,11893468,11889387,11888669,11886917,11886713,11886499,11885676,11883471	11908355,11906309,11905953,11897620,11897356,11893576,11889490,11888743,11887025,11886778,11886621,11885816,11884627	Gene ID= ENSG00000154889.16 TPM= 3.5 Transcript Type= NA
chr18	11884053	11908355	11884053	11908355	-	transcript473.chr18.nic@MPPE1	transcript473.chr18.nic	protein_coding	11908201,11906203,11897526,11896984,11893468,11889387,11888669,11886917,11886713,11886499,11885676,11884879,11884053	11908355,11906309,11897620,11897356,11893576,11889490,11888743,11887025,11886778,11886621,11885816,11885043,11884627	Gene ID= ENSG00000154889.16 TPM= 6.04 Transcript Type= NA
chr18	11884053	11908355	11884053	11908355	-	transcript474.chr18.nic@MPPE1	transcript474.chr18.nic	protein_coding	11908201,11906203,11905738,11896984,11893468,11889387,11888669,11886917,11886713,11886499,11885676,11884879,11884053	11908355,11906309,11905953,11897356,11893576,11889490,11888743,11887025,11886778,11886621,11885816,11885043,11884627	Gene ID= ENSG00000154889.16 TPM= 2.53 Transcript Type= NA
chr18	11884053	11908355	11884053	11908355	-	transcript476.chr18.nnic@MPPE1	transcript476.chr18.nnic	protein_coding	11908201,11906234,11905738,11897526,11896984,11893468,11889387,11888669,11886917,11886713,11886499,11885676,11884053	11908355,11906309,11905953,11897620,11897356,11893576,11889490,11888743,11887025,11886778,11886621,11885816,11884627	Gene ID= ENSG00000154889.16 TPM= 3.12 Transcript Type= NA
chr18	11883471	11908355	11883471	11908355	-	transcript483.chr18.nic@MPPE1	transcript483.chr18.nic	protein_coding	11908201,11906203,11897526,11896984,11893468,11889387,11888669,11886917,11886713,11886499,11885676,11883471	11908355,11906309,11897620,11897356,11893576,11889490,11888743,11887025,11886778,11886621,11885816,11884627	Gene ID= ENSG00000154889.16 TPM= 4.67 Transcript Type= NA
chr18	11884053	11908355	11884053	11908355	-	transcript489.chr18.nic@MPPE1	transcript489.chr18.nic	protein_coding	11908201,11906203,11905738,11896984,11893468,11889387,11888669,11886917,11886713,11886499,11885676,11884053	11908355,11906309,11905953,11897356,11893576,11889490,11888743,11887025,11886778,11886621,11885816,11884627	Gene ID= ENSG00000154889.16 TPM= 2.53 Transcript Type= NA
chr18	11882622	11909223	11882622	11909223	-	ENST00000588072.5@MPPE1	ENST00000588072.5	protein_coding	11908201,11906203,11896984,11893468,11889387,11888669,11886917,11886713,11886499,11885676,11882622	11909223,11906309,11897356,11893576,11889490,11888743,11887025,11886778,11886621,11885816,11884627	Gene ID= ENSG00000154889.16 TPM= 9.34 Transcript Type= protein_coding
chr18	11883471	11908349	11883471	11908349	-	ENST00000317235.11@MPPE1	ENST00000317235.11	protein_coding	11908201,11906203,11896984,11893468,11889387,11888669,11886917,11885676,11883471	11908349,11906309,11897356,11893576,11889490,11888743,11887025,11885816,11884627	Gene ID= ENSG00000154889.16 TPM= 2.34 Transcript Type= protein_coding
chr18	11897186	11908301	11897186	11908301	-	ENST00000593001.5@MPPE1	ENST00000593001.5	protein_coding	11908201,11906203,11897186	11908301,11906309,11897356	Gene ID= ENSG00000154889.16 TPM= 1.17 Transcript Type= non_stop_decay
chr18	11981428	12030883	11981428	12030883	+	ENST00000269159.7@IMPA2	ENST00000269159.7	protein_coding	11981428,11999054,12009883,12012170,12014265,12028043,12028842,12030343	11981765,11999187,12009987,12012215,12014373,12028151,12028993,12030883	Gene ID= ENSG00000141401.11 TPM= 104.88 Transcript Type= protein_coding
chr18	11981508	12030875	11981508	12030875	+	transcript530.chr18.nic@IMPA2	transcript530.chr18.nic	protein_coding	11981508,11999054,12009883,12012170,12014265,12028043,12030343	11981765,11999187,12009987,12012215,12014373,12028993,12030875	Gene ID= ENSG00000141401.11 TPM= 4.47 Transcript Type= NA
chr18	11981508	12030875	11981508	12030875	+	transcript531.chr18.nic@IMPA2	transcript531.chr18.nic	protein_coding	11981508,11999054,12009883,12012170,12028043,12028842,12030343	11981765,11999187,12009987,12014373,12028151,12028993,12030875	Gene ID= ENSG00000141401.11 TPM= 5.06 Transcript Type= NA
chr18	12305598	12308503	12305598	12308503	-	transcript573.chr18.nnic@NA	transcript573.chr18.nnic	NA	12305598	12308503	Gene ID= novel_gene_chr18_574 TPM= 5.84 Transcript Type= NA
chr18	12308241	12326563	12308241	12326563	+	ENST00000417736.2@TUBB6	ENST00000417736.2	protein_coding	12308241,12310943,12325067	12308795,12311053,12326563	Gene ID= ENSG00000176014.12 TPM= 12.84 Transcript Type= retained_intron
chr18	12308590	12331478	12308590	12331478	+	transcript568.chr18.nic@TUBB6	transcript568.chr18.nic	protein_coding	12308590,12310943,12329146	12308795,12311053,12331478	Gene ID= ENSG00000176014.12 TPM= 3.5 Transcript Type= NA
chr18	12308059	12326619	12308059	12326619	+	ENST00000317702.9@TUBB6	ENST00000317702.9	protein_coding	12308059,12308687,12310943,12325067	12308349,12308795,12311053,12326619	Gene ID= ENSG00000176014.12 TPM= 33.86 Transcript Type= protein_coding
chr18	12308234	12329826	12308234	12329826	+	ENST00000591909.5@TUBB6	ENST00000591909.5	protein_coding	12308234,12308687,12310943,12329146	12308349,12308795,12311053,12329826	Gene ID= ENSG00000176014.12 TPM= 9.34 Transcript Type= protein_coding
chr18	12341266	12377259	12341266	12377259	-	transcript550.chr18.nic@AFG3L2	transcript550.chr18.nic	protein_coding	12376969,12371592,12370849,12367276,12366965,12363782,12359927,12358670,12356694,12353005,12351306,12351085,12348273,12341266	12377259,12371691,12370926,12367382,12367117,12363856,12360051,12358943,12356831,12353158,12351413,12351210,12348383,12344247	Gene ID= ENSG00000141385.9 TPM= 3.5 Transcript Type= NA
chr18	12328944	12377314	12328944	12377314	-	ENST00000269143.7@AFG3L2	ENST00000269143.7	protein_coding	12376969,12371592,12370849,12367276,12366965,12363782,12359927,12358670,12356694,12353005,12351306,12351085,12348273,12344132,12340201,12337341,12328944	12377314,12371691,12370926,12367382,12367117,12363856,12360051,12358943,12356831,12353158,12351413,12351210,12348383,12344247,12340401,12337535,12329783	Gene ID= ENSG00000141385.9 TPM= 96.91 Transcript Type= protein_coding
chr18	12407896	12432233	12407896	12432233	+	ENST00000440960.5@PRELID3A	ENST00000440960.5	protein_coding	12407896,12420325,12421540,12427041,12427221,12429350,12431150	12408007,12420493,12421629,12427111,12427323,12429436,12432233	Gene ID= ENSG00000141391.13 TPM= 1.17 Transcript Type= protein_coding
chr18	12407899	12408932	12407899	12408932	+	transcript594.chr18.nnic@NA	transcript594.chr18.nnic	NA	12407899	12408932	Gene ID= novel_gene_chr18_595 TPM= 2.34 Transcript Type= NA
chr18	12446512	12658130	12446512	12658130	-	transcript577.chr18.nic@SPIRE1	transcript577.chr18.nic	protein_coding	12657530,12635062,12546674,12535476,12512454,12506477,12496016,12493072,12479699,12464868,12463351,12459755,12454346,12453068,12452485,12452255,12446512	12658130,12635096,12546904,12535601,12512531,12506641,12496102,12493201,12479871,12464958,12463493,12459928,12454483,12453138,12452512,12452391,12449896	Gene ID= ENSG00000134278.15 TPM= 20.43 Transcript Type= NA
chr18	12446513	12658045	12446513	12658045	-	ENST00000410092.7@SPIRE1	ENST00000410092.7	protein_coding	12657530,12635062,12546674,12535476,12512454,12506477,12496016,12493072,12479699,12464868,12463351,12454346,12453068,12452485,12452255,12446513	12658045,12635096,12546904,12535601,12512531,12506641,12496102,12493201,12479871,12464958,12463493,12454483,12453138,12452512,12452391,12449896	Gene ID= ENSG00000134278.15 TPM= 28.61 Transcript Type= protein_coding
chr18	12702426	12725740	12702426	12725740	+	ENST00000317615.10@PSMG2	ENST00000317615.10	protein_coding	12702426,12706550,12712702,12718517,12720510,12724499,12725439	12703164,12706721,12712760,12718635,12720683,12724619,12725740	Gene ID= ENSG00000128789.20 TPM= 86.4 Transcript Type= protein_coding
chr18	12672632	12702774	12672632	12702774	-	ENST00000262127.6@CEP76	ENST00000262127.6	protein_coding	12702486,12700958,12699830,12698979,12697223,12695254,12691359,12686262,12680662,12678109,12674536,12672632	12702774,12701113,12699905,12699203,12697408,12695351,12691487,12686450,12680828,12678442,12674753,12673503	Gene ID= ENSG00000101624.10 TPM= 1.17 Transcript Type= protein_coding
chr18	12714489	12716549	12714489	12716549	-	transcript609.chr18.nnic@NA	transcript609.chr18.nnic	NA	12714489	12716549	Gene ID= novel_gene_chr18_610 TPM= 4.67 Transcript Type= NA
chr18	12785478	12884338	12785478	12884338	-	ENST00000327283.7@PTPN2	ENST00000327283.7	protein_coding	12884073,12859164,12836791,12830943,12825810,12817156,12814203,12801970,12794384,12785478	12884338,12859254,12836891,12831041,12825944,12817365,12814355,12802151,12794485,12785844	Gene ID= ENSG00000175354.18 TPM= 45.54 Transcript Type= protein_coding
chr18	12792302	12884211	12792302	12884211	-	transcript631.chr18.nic@PTPN2	transcript631.chr18.nic	protein_coding	12884073,12859164,12836791,12830943,12825810,12817156,12814203,12801970,12792302	12884211,12859254,12836891,12831041,12825944,12817265,12814355,12802151,12794485	Gene ID= ENSG00000175354.18 TPM= 2.34 Transcript Type= NA
chr18	12785481	12884214	12785481	12884214	-	ENST00000591115.5@PTPN2	ENST00000591115.5	protein_coding	12884073,12859164,12836791,12830943,12825810,12819214,12817156,12814203,12801970,12794384,12785481	12884214,12859254,12836891,12831041,12825944,12819282,12817365,12814355,12802151,12794485,12785844	Gene ID= ENSG00000175354.18 TPM= 1.17 Transcript Type= protein_coding
chr18	12792153	12884235	12792153	12884235	-	ENST00000309660.9@PTPN2	ENST00000309660.9	protein_coding	12884073,12859164,12836791,12830943,12825810,12817156,12814203,12801970,12792153	12884235,12859254,12836891,12831041,12825944,12817365,12814355,12802151,12794485	Gene ID= ENSG00000175354.18 TPM= 3.5 Transcript Type= protein_coding
chr18	12947995	12987536	12947995	12987536	+	ENST00000262124.15@SEH1L	ENST00000262124.15	protein_coding	12947995,12951855,12955463,12963160,12971153,12978752,12982518,12984040,12985240	12948232,12951905,12955609,12963371,12971251,12978892,12982675,12984190,12987536	Gene ID= ENSG00000085415.15 TPM= 58.38 Transcript Type= protein_coding
chr18	13068130	13125036	13068130	13125036	+	transcript644.chr18.nic@CEP192	transcript644.chr18.nic	protein_coding	13068130,13068359,13068852,13069089,13069738,13071039,13072755,13073009,13087017,13087531,13089456,13092377,13095503,13096184,13099476,13100305,13103509,13104984,13113586,13114130,13116377,13117585,13124632	13068237,13068422,13068991,13069181,13069856,13071212,13072845,13073185,13087277,13087646,13089565,13092527,13095681,13096307,13099581,13100512,13103588,13105079,13113705,13114251,13116503,13117643,13125036	Gene ID= ENSG00000101639.18 TPM= 7.01 Transcript Type= NA
chr18	13271895	13275702	13271895	13275702	-	transcript653.chr18.nnic@NA	transcript653.chr18.nnic	NA	13271895	13275702	Gene ID= novel_gene_chr18_654 TPM= 2.34 Transcript Type= NA
chr18	13419421	13427480	13419421	13427480	-	ENST00000588672.1@LDLRAD4-AS1	ENST00000588672.1	antisense_RNA	13427380,13425932,13423575,13419421	13427480,13426113,13423693,13421208	Gene ID= ENSG00000267690.1 TPM= 1.17 Transcript Type= antisense_RNA
chr18	13464981	13466486	13464981	13466486	+	transcript649.chr18.nnic@NA	transcript649.chr18.nnic	NA	13464981	13466486	Gene ID= novel_gene_chr18_650 TPM= 2.34 Transcript Type= NA
chr18	13476537	13479624	13476537	13479624	+	transcript651.chr18.nnic@NA	transcript651.chr18.nnic	NA	13476537	13479624	Gene ID= novel_gene_chr18_652 TPM= 2.34 Transcript Type= NA
chr18	13663351	13726592	13663351	13726592	-	ENST00000402563.5@FAM210A	ENST00000402563.5	protein_coding	13726329,13681605,13671862,13663351	13726592,13682105,13671973,13666713	Gene ID= ENSG00000177150.12 TPM= 4.67 Transcript Type= protein_coding
chr18	13726661	13764558	13726661	13764558	+	ENST00000383314.6@RNMT	ENST00000383314.6	protein_coding	13726661,13730627,13731476,13734464,13737010,13740167,13741510,13742488,13746220,13752326,13754114,13759942	13726729,13730755,13731934,13734599,13737135,13740279,13741691,13742652,13746337,13752427,13754147,13764558	Gene ID= ENSG00000101654.17 TPM= 2.34 Transcript Type= protein_coding
chr18	13726704	13764556	13726704	13764556	+	ENST00000592764.5@RNMT	ENST00000592764.5	protein_coding	13726704,13730627,13731476,13734464,13737010,13740167,13741510,13742488,13746220,13752326,13754114,13762039	13726729,13730755,13731934,13734599,13737135,13740279,13741691,13742652,13746337,13752427,13754147,13764556	Gene ID= ENSG00000101654.17 TPM= 7.01 Transcript Type= protein_coding
chr18	14103863	14132430	14103863	14132430	-	ENST00000590202.2@ZNF519	ENST00000590202.2	protein_coding	14132275,14124350,14103863	14132430,14124476,14106409	Gene ID= ENSG00000175322.11 TPM= 1.17 Transcript Type= protein_coding
chr18	20946906	21111851	20946906	21111851	-	ENST00000399799.2@ROCK1	ENST00000399799.2	protein_coding	21110818,21070532,21049780,21049092,21045292,21044102,21042565,21042097,21039472,21028776,21023620,21020151,21015431,21008059,21006699,21006351,20992831,20991176,20986950,20984351,20982763,20979910,20970348,20969115,20968772,20967752,20966917,20960136,20959840,20955167,20954783,20953578,20946906	21111851,21070613,21049880,21049229,21045467,21044186,21042709,21042235,21039563,21028935,21023680,21020239,21015479,21008194,21006790,21006597,20992937,20991326,20987110,20984535,20982832,20980004,20970513,20969208,20968860,20967940,20967076,20960206,20959928,20955245,20955044,20953785,20951387	Gene ID= ENSG00000067900.7 TPM= 6.42 Transcript Type= protein_coding
chr18	20949952	21111823	20949952	21111823	-	transcript681.chr18.nic@ROCK1	transcript681.chr18.nic	protein_coding	21110818,21070532,21049780,21049092,21045292,21044102,21042565,21042097,21039472,21028776,21023620,21020151,21015431,21008059,21006699,21006351,20992831,20991176,20986950,20984351,20982763,20979910,20969115,20968772,20967752,20966917,20960136,20959840,20955167,20954783,20953578,20949952	21111823,21070613,21049880,21049229,21045467,21044186,21042709,21042235,21039563,21028935,21023680,21020239,21015479,21008194,21006790,21006597,20992937,20991326,20987110,20984535,20982832,20980004,20970513,20968860,20967940,20967076,20960206,20959928,20955245,20955044,20953785,20951387	Gene ID= ENSG00000067900.7 TPM= 2.92 Transcript Type= NA
chr18	20979952	21111742	20979952	21111742	-	transcript684.chr18.nnic@ROCK1	transcript684.chr18.nnic	protein_coding	21110818,21070532,21049780,21049092,21045292,21044102,21042565,21042097,21039472,21028776,21023620,21020151,21015431,21015271,21008059,21006699,21006351,20992831,20991176,20986950,20984351,20982763,20979952	21111742,21070613,21049880,21049229,21045467,21044186,21042709,21042235,21039563,21028935,21023680,21020239,21015479,21015336,21008194,21006790,21006597,20992937,20991326,20987110,20984535,20982832,20980004	Gene ID= ENSG00000067900.7 TPM= 2.34 Transcript Type= NA
chr18	21080986	21085355	21080986	21085355	+	transcript694.chr18.nnic@NA	transcript694.chr18.nnic	NA	21080986	21085355	Gene ID= novel_gene_chr18_695 TPM= 3.5 Transcript Type= NA
chr18	21529281	21600736	21529281	21600736	-	ENST00000269214.9@ESCO1	ENST00000269214.9	protein_coding	21600623,21584310,21575672,21573314,21567980,21566146,21564203,21560859,21539920,21536042,21532473,21529281	21600736,21584440,21575777,21575430,21568094,21566206,21564317,21560990,21540009,21536185,21532660,21530490	Gene ID= ENSG00000141446.10 TPM= 14.01 Transcript Type= protein_coding
chr18	21650897	21704822	21650897	21704822	-	transcript715.chr18.nnic@ABHD3	transcript715.chr18.nnic	protein_coding	21704504,21703584,21702316,21683920,21681761,21663678,21659170,21657104,21656861,21650897	21704822,21703747,21702498,21683965,21681956,21664230,21659343,21657152,21657026,21651763	Gene ID= ENSG00000158201.9 TPM= 4.09 Transcript Type= NA
chr18	21650897	21704822	21650897	21704822	-	transcript716.chr18.nnic@ABHD3	transcript716.chr18.nnic	protein_coding	21704504,21703584,21702316,21683920,21681816,21663678,21659170,21657104,21656861,21650897	21704822,21703747,21702498,21683965,21681956,21664230,21659343,21657152,21657026,21651763	Gene ID= ENSG00000158201.9 TPM= 2.92 Transcript Type= NA
chr18	21650897	21704822	21650897	21704822	-	transcript719.chr18.nic@ABHD3	transcript719.chr18.nic	protein_coding	21704504,21703584,21702316,21683920,21663678,21659170,21657104,21656861,21650897	21704822,21703747,21702498,21683965,21664230,21659343,21657152,21657026,21651763	Gene ID= ENSG00000158201.9 TPM= 7.59 Transcript Type= NA
chr18	21650897	21704822	21650897	21704822	-	transcript723.chr18.nic@ABHD3	transcript723.chr18.nic	protein_coding	21704504,21703584,21702316,21663678,21659170,21657104,21656861,21650897	21704822,21703747,21702498,21664230,21659343,21657152,21657026,21651763	Gene ID= ENSG00000158201.9 TPM= 4.09 Transcript Type= NA
chr18	21677362	21704822	21677362	21704822	-	transcript726.chr18.nnic@ABHD3	transcript726.chr18.nnic	protein_coding	21704504,21703584,21702316,21683920,21677362	21704822,21703747,21702498,21683965,21681956	Gene ID= ENSG00000158201.9 TPM= 2.34 Transcript Type= NA
chr18	21650897	21704805	21650897	21704805	-	ENST00000289119.6@ABHD3	ENST00000289119.6	protein_coding	21704504,21703584,21702316,21683920,21664118,21659170,21657104,21656861,21650897	21704805,21703747,21702498,21683965,21664230,21659343,21657152,21657026,21651763	Gene ID= ENSG00000158201.9 TPM= 30.36 Transcript Type= protein_coding
chr18	21650928	21704767	21650928	21704767	-	ENST00000580981.5@ABHD3	ENST00000580981.5	protein_coding	21704504,21703584,21702316,21659170,21657104,21656861,21650928	21704767,21703747,21702498,21659343,21657152,21657026,21651763	Gene ID= ENSG00000158201.9 TPM= 5.84 Transcript Type= protein_coding
chr18	22170267	22201978	22170267	22201978	+	transcript740.chr18.nnic@GATA6	transcript740.chr18.nnic	protein_coding	22170267,22171108,22176955,22181453,22182757,22182940,22200656	22170357,22172279,22177121,22181578,22182844,22183043,22201978	Gene ID= ENSG00000141448.8 TPM= 6.42 Transcript Type= NA
chr18	22169443	22202528	22169443	22202528	+	ENST00000269216.7@GATA6	ENST00000269216.7	protein_coding	22169443,22171108,22176955,22181453,22182757,22182940,22200656	22169682,22172279,22177121,22181578,22182844,22183043,22202528	Gene ID= ENSG00000141448.8 TPM= 20.43 Transcript Type= protein_coding
chr18	22933315	23026486	22933315	23026486	+	ENST00000327155.9@RBBP8	ENST00000327155.9	protein_coding	22933315,22936754,22946444,22949618,22968806,22975153,22982218,22984886,22989221,22990937,22992748,22993721,22996374,22997620,23001586,23006363,23016828,23022129,23026143	22933564,22936960,22946486,22949713,22968918,22975219,22982393,22984990,22989318,22991049,22993639,22993847,22996462,22997734,23001729,23006432,23016924,23022270,23026486	Gene ID= ENSG00000101773.18 TPM= 19.85 Transcript Type= protein_coding
chr18	23016796	23026488	23016796	23026488	+	ENST00000581687.1@RBBP8	ENST00000581687.1	protein_coding	23016796,23022129,23026143	23016924,23022270,23026488	Gene ID= ENSG00000101773.18 TPM= 1.17 Transcript Type= protein_coding
chr18	23135487	23258653	23135487	23258653	+	transcript781.chr18.nnic@CABLES1	transcript781.chr18.nnic	protein_coding	23135487,23136524,23188838,23194448,23213977,23234608,23235895,23237142,23252960,23253729,23257227	23136416,23136607,23188909,23194540,23214054,23234704,23236051,23237245,23253066,23253936,23258653	Gene ID= ENSG00000134508.12 TPM= 4.67 Transcript Type= NA
chr18	23296013	23437965	23296013	23437965	-	transcript772.chr18.nic@TMEM241	transcript772.chr18.nic	protein_coding	23437781,23430631,23421367,23399566,23384990,23377646,23373712,23371422,23368715,23365634,23356594,23352196,23309680,23296013	23437965,23430677,23421444,23399647,23385067,23377671,23373763,23371470,23368750,23365668,23356663,23352289,23309744,23298067	Gene ID= ENSG00000134490.13 TPM= 3.89 Transcript Type= NA
chr18	23296017	23437905	23296017	23437905	-	ENST00000383233.7@TMEM241	ENST00000383233.7	protein_coding	23437781,23430631,23421367,23399566,23384990,23377646,23373712,23371422,23370216,23368715,23365634,23356594,23352196,23309680,23296017	23437905,23430677,23421444,23399647,23385067,23377671,23373763,23371470,23370261,23368750,23365668,23356663,23352289,23309744,23298067	Gene ID= ENSG00000134490.13 TPM= 6.22 Transcript Type= protein_coding
chr18	23296013	23331259	23296013	23331259	-	ENST00000475185.5@TMEM241	ENST00000475185.5	protein_coding	23331030,23309680,23296013	23331259,23309744,23298067	Gene ID= ENSG00000134490.13 TPM= 8.56 Transcript Type= processed_transcript
chr18	23293371	23296414	23293371	23296414	-	transcript797.chr18.nnic@NA	transcript797.chr18.nnic	NA	23293371	23296414	Gene ID= novel_gene_chr18_798 TPM= 2.34 Transcript Type= NA
chr18	23452823	23483140	23452823	23483140	+	ENST00000339486.7@RIOK3	ENST00000339486.7	protein_coding	23452823,23462964,23463967,23464206,23464519,23466133,23467399,23473429,23474948,23477006,23477179,23479317,23481172	23453502,23463079,23464112,23464313,23464628,23466276,23467526,23473626,23475107,23477086,23477268,23479424,23483140	Gene ID= ENSG00000101782.14 TPM= 88.15 Transcript Type= protein_coding
chr18	23453244	23483137	23453244	23483137	+	transcript804.chr18.nic@RIOK3	transcript804.chr18.nic	protein_coding	23453244,23462964,23463967,23464206,23464519,23466133,23467399,23473429,23474948,23477006,23479317,23481172	23453502,23463079,23464112,23464313,23464628,23466276,23467526,23473483,23475107,23477268,23479424,23483137	Gene ID= ENSG00000101782.14 TPM= 2.92 Transcript Type= NA
chr18	23453308	23481500	23453308	23481500	+	ENST00000577501.5@RIOK3	ENST00000577501.5	protein_coding	23453308,23462964,23463967,23464206,23464519,23466133,23467399,23473429,23474948,23477006,23477179,23479326,23481172	23453502,23463079,23464112,23464313,23464628,23466276,23467526,23473626,23475107,23477086,23477268,23479424,23481500	Gene ID= ENSG00000101782.14 TPM= 4.67 Transcript Type= protein_coding
chr18	23503458	23531782	23503458	23531782	+	transcript839.chr18.nic@C18orf8	transcript839.chr18.nic	protein_coding	23503458,23504371,23506970,23507985,23509193,23515856,23516320,23518890,23519069,23520202,23524130,23524429,23526637,23527795,23529179,23529635,23530028,23530229,23530511,23531625	23503720,23504447,23507054,23508041,23509279,23515996,23516423,23518979,23519174,23520313,23524174,23524482,23526765,23527901,23529298,23529712,23530132,23530297,23530612,23531782	Gene ID= ENSG00000141452.9 TPM= 2.34 Transcript Type= NA
chr18	23503523	23531782	23503523	23531782	+	transcript843.chr18.nic@C18orf8	transcript843.chr18.nic	protein_coding	23503523,23504371,23507985,23509193,23515856,23516320,23518890,23519069,23520202,23524130,23524429,23526637,23527795,23529179,23529635,23530028,23530229,23530387,23531625	23503720,23504447,23508041,23509279,23515996,23516423,23518979,23519174,23520313,23524174,23524482,23526765,23527901,23529298,23529712,23530132,23530297,23530612,23531782	Gene ID= ENSG00000141452.9 TPM= 5.25 Transcript Type= NA
chr18	23503509	23531782	23503509	23531782	+	ENST00000269221.7@C18orf8	ENST00000269221.7	protein_coding	23503509,23504371,23506970,23507985,23509193,23515856,23516320,23518890,23519069,23520202,23524130,23524429,23526637,23527795,23529179,23529635,23530028,23530229,23530387,23531625	23503720,23504447,23507054,23508041,23509279,23515996,23516423,23518979,23519174,23520313,23524174,23524482,23526765,23527901,23529298,23529712,23530132,23530297,23530612,23531782	Gene ID= ENSG00000141452.9 TPM= 26.27 Transcript Type= protein_coding
chr18	23503488	23506181	23503488	23506181	+	transcript849.chr18.nnic@NA	transcript849.chr18.nnic	NA	23503488	23506181	Gene ID= novel_gene_chr18_850 TPM= 2.34 Transcript Type= NA
chr18	23506184	23586912	23506184	23586912	-	transcript815.chr18.nic@NPC1	transcript815.chr18.nic	protein_coding	23586287,23573452,23572074,23568823,23561360,23560231,23557117,23556243,23554758,23551627,23548006,23544960,23544344,23543455,23541306,23541068,23540448,23539811,23539355,23538542,23536673,23535469,23534446,23533355,23506184	23586912,23573574,23572180,23568998,23561527,23560480,23557190,23556613,23554984,23551727,23548108,23545149,23544526,23543569,23541433,23541208,23540537,23540001,23539470,23538671,23536876,23535700,23534559,23533517,23506642	Gene ID= ENSG00000141458.12 TPM= 9.05 Transcript Type= NA
chr18	23531437	23586898	23531437	23586898	-	ENST00000269228.9@NPC1	ENST00000269228.9	protein_coding	23586287,23573452,23572074,23568823,23561360,23560231,23557117,23556243,23554758,23551627,23548006,23544960,23544344,23543455,23541306,23541068,23540448,23539811,23539355,23538542,23536673,23535469,23534446,23533355,23531437	23586898,23573574,23572180,23568998,23561527,23560480,23557190,23556613,23554984,23551727,23548108,23545149,23544526,23543569,23541433,23541208,23540537,23540001,23539470,23538671,23536876,23535700,23534559,23533517,23532284	Gene ID= ENSG00000141458.12 TPM= 6.13 Transcript Type= protein_coding
chr18	23531499	23586887	23531499	23586887	-	transcript822.chr18.nic@NPC1	transcript822.chr18.nic	protein_coding	23586287,23573452,23572074,23568823,23561360,23560231,23557117,23556243,23554758,23551627,23548006,23544960,23544344,23543455,23541306,23541068,23540448,23539811,23539355,23538542,23536673,23535469,23534446,23533355,23531499	23586887,23573574,23572180,23568998,23561527,23560480,23557190,23556664,23554984,23551727,23548108,23545149,23544526,23543569,23541433,23541208,23540537,23540001,23539470,23538671,23536876,23535700,23534559,23533517,23532284	Gene ID= ENSG00000141458.12 TPM= 14.3 Transcript Type= NA
chr18	23533202	23586912	23533202	23586912	-	transcript831.chr18.nic@NPC1	transcript831.chr18.nic	protein_coding	23586287,23573452,23572074,23568823,23561360,23560231,23557117,23556243,23554758,23551627,23548006,23544960,23544344,23543455,23541306,23541068,23540448,23539811,23539355,23538542,23536673,23535469,23534446,23533202	23586912,23573574,23572180,23568998,23561527,23560480,23557190,23556613,23554984,23551727,23548108,23545149,23544526,23543569,23541433,23541208,23540537,23540001,23539470,23538671,23536876,23535700,23534559,23533517	Gene ID= ENSG00000141458.12 TPM= 7.88 Transcript Type= NA
chr18	23600010	23662926	23600010	23662926	-	transcript867.chr18.nnic@ANKRD29	transcript867.chr18.nnic	protein_coding	23662710,23649083,23646189,23638849,23629853,23619531,23617732,23612092,23600010	23662926,23649193,23646287,23638947,23629951,23619629,23617827,23612190,23601309	Gene ID= ENSG00000154065.16 TPM= 3.5 Transcript Type= NA
chr18	23600459	23662926	23600459	23662926	-	transcript873.chr18.nic@ANKRD29	transcript873.chr18.nic	protein_coding	23662710,23649083,23646189,23634051,23629853,23619531,23617732,23612092,23600459	23662926,23649193,23646287,23634149,23629951,23619629,23617827,23612190,23601309	Gene ID= ENSG00000154065.16 TPM= 2.34 Transcript Type= NA
chr18	23600010	23662926	23600010	23662926	-	transcript879.chr18.nnic@ANKRD29	transcript879.chr18.nnic	protein_coding	23662710,23649083,23646189,23617732,23612092,23600010	23662926,23649193,23646287,23617827,23612190,23601309	Gene ID= ENSG00000154065.16 TPM= 2.34 Transcript Type= NA
chr18	23598926	23662885	23598926	23662885	-	ENST00000592179.5@ANKRD29	ENST00000592179.5	protein_coding	23662710,23649083,23646189,23638849,23634051,23629853,23619531,23617732,23612092,23598926	23662885,23649193,23646287,23638947,23634149,23629951,23619629,23617827,23612190,23601309	Gene ID= ENSG00000154065.16 TPM= 28.02 Transcript Type= protein_coding
chr18	23648411	23662772	23648411	23662772	-	ENST00000585908.2@ANKRD29	ENST00000585908.2	protein_coding	23662710,23648411	23662772,23649193	Gene ID= ENSG00000154065.16 TPM= 2.34 Transcript Type= protein_coding
chr18	23872840	23954939	23872840	23954939	+	ENST00000269217.10@LAMA3	ENST00000269217.10	protein_coding	23872840,23876294,23881936,23884773,23890011,23894298,23894907,23898738,23898954,23899288,23901127,23903009,23903933,23904553,23905522,23907550,23907756,23909153,23912711,23914410,23914698,23915289,23916551,23920935,23921452,23928123,23928625,23931062,23932160,23933782,23939223,23943788,23946144,23949765,23950029,23951684,23952990,23954503	23873215,23876407,23882045,23884853,23890117,23894348,23895058,23898848,23899065,23899455,23901323,23903125,23904087,23904694,23905624,23907666,23907935,23909295,23912881,23914561,23914860,23915422,23916695,23921054,23921585,23928240,23928765,23931201,23932291,23933935,23939386,23943971,23946284,23949924,23950159,23951777,23953109,23954939	Gene ID= ENSG00000053747.15 TPM= 14.01 Transcript Type= protein_coding
chr18	23689584	23748436	23689584	23748436	+	transcript893.chr18.nic@LAMA3	transcript893.chr18.nic	protein_coding	23689584,23713920,23747943	23689977,23714072,23748436	Gene ID= ENSG00000053747.15 TPM= 4.67 Transcript Type= NA
chr18	23717722	23719381	23717722	23719381	-	transcript895.chr18.nnic@NA	transcript895.chr18.nnic	NA	23717722	23719381	Gene ID= novel_gene_chr18_896 TPM= 5.84 Transcript Type= NA
chr18	24014636	24133028	24014636	24133028	+	ENST00000317571.7@TTC39C	ENST00000317571.7	protein_coding	24014636,24064140,24066012,24069157,24080585,24082913,24114554,24118125,24123834,24125427,24128886,24130313,24131882,24132485	24015038,24064188,24066140,24069271,24080939,24083081,24114647,24118232,24123943,24125550,24128983,24130417,24131920,24133028	Gene ID= ENSG00000168234.12 TPM= 1.17 Transcript Type= protein_coding
chr18	24014420	24020288	24014420	24020288	+	ENST00000584250.1@TTC39C	ENST00000584250.1	protein_coding	24014420,24019860	24015038,24020288	Gene ID= ENSG00000168234.12 TPM= 2.34 Transcript Type= protein_coding
chr18	24162045	24397885	24162045	24397885	-	transcript910.chr18.nic@OSBPL1A	transcript910.chr18.nic	protein_coding	24397655,24377413,24368287,24366892,24334245,24332942,24318748,24318601,24317327,24317149,24314249,24311984,24303637,24280842,24239220,24225042,24196125,24181145,24179738,24178013,24172376,24171409,24170327,24167329,24166579,24165065,24162045	24397885,24377535,24368372,24366966,24334330,24333086,24318809,24318645,24317400,24317212,24314347,24312106,24303718,24280948,24239382,24225198,24196200,24181279,24179835,24178195,24172483,24171498,24170453,24167445,24166702,24165155,24163281	Gene ID= ENSG00000141447.17 TPM= 3.93 Transcript Type= NA
chr18	24162045	24272232	24162045	24272232	-	ENST00000399443.7@OSBPL1A	ENST00000399443.7	protein_coding	24271622,24239220,24225042,24196125,24181145,24179738,24178013,24172376,24171409,24170327,24167329,24166579,24165065,24162045	24272232,24239382,24225198,24196200,24181279,24179835,24178195,24172483,24171498,24170453,24167445,24166702,24165155,24163281	Gene ID= ENSG00000141447.17 TPM= 57.64 Transcript Type= protein_coding
chr18	24162045	24272236	24162045	24272236	-	transcript922.chr18.nnic@OSBPL1A	transcript922.chr18.nnic	protein_coding	24271622,24239220,24225042,24196125,24179738,24178013,24172376,24171409,24170327,24167329,24166579,24165065,24162045	24272236,24239382,24225198,24196200,24179835,24178195,24172483,24171498,24170453,24167445,24166702,24165155,24163281	Gene ID= ENSG00000141447.17 TPM= 9.77 Transcript Type= NA
chr18	24162044	24397859	24162044	24397859	-	ENST00000319481.7@OSBPL1A	ENST00000319481.7	protein_coding	24397655,24377413,24368287,24366892,24341547,24334245,24332942,24318748,24318601,24317327,24317149,24314249,24311984,24303637,24280842,24239220,24225042,24196125,24181145,24179738,24178013,24172376,24171409,24170327,24167329,24166579,24165065,24162044	24397859,24377535,24368372,24366966,24341658,24334330,24333086,24318809,24318645,24317400,24317212,24314347,24312106,24303718,24280948,24239382,24225198,24196200,24181279,24179835,24178195,24172483,24171498,24170453,24167445,24166702,24165155,24163281	Gene ID= ENSG00000141447.17 TPM= 17.71 Transcript Type= protein_coding
chr18	24426616	24453535	24426616	24453535	+	ENST00000284202.8@IMPACT	ENST00000284202.8	protein_coding	24426616,24427919,24428869,24430322,24437955,24440496,24443049,24445393,24448093,24449819,24450779	24426792,24428047,24428921,24430384,24438040,24440618,24443152,24445466,24448183,24449953,24453535	Gene ID= ENSG00000154059.9 TPM= 45.54 Transcript Type= protein_coding
chr18	25061926	25351740	25061926	25351740	-	transcript953.chr18.nic@ZNF521	transcript953.chr18.nic	protein_coding	25350907,25322008,25224345,25195160,25091950,25089465,25061926	25351740,25322187,25227697,25195244,25092081,25089580,25062741	Gene ID= ENSG00000198795.10 TPM= 5.25 Transcript Type= NA
chr18	25061926	25352152	25061926	25352152	-	ENST00000361524.7@ZNF521	ENST00000361524.7	protein_coding	25352005,25350907,25322008,25224345,25195160,25091950,25089465,25061926	25352152,25350947,25322187,25227697,25195244,25092081,25089580,25062741	Gene ID= ENSG00000198795.10 TPM= 13.43 Transcript Type= protein_coding
chr18	26016253	26090668	26016253	26090668	-	transcript963.chr18.nic@SS18	transcript963.chr18.nic	protein_coding	26090501,26087501,26078076,26057589,26052624,26039289,26035005,26032399,26016253	26090668,26087577,26078160,26057742,26052845,26039456,26038659,26032532,26018380	Gene ID= ENSG00000141380.13 TPM= 4.67 Transcript Type= NA
chr18	26016253	26090625	26016253	26090625	-	ENST00000415083.6@SS18	ENST00000415083.6	protein_coding	26090501,26087501,26078076,26057589,26052624,26039289,26038555,26035831,26035005,26032399,26016253	26090625,26087577,26078160,26057742,26052845,26039456,26038659,26035923,26035127,26032532,26018380	Gene ID= ENSG00000141380.13 TPM= 43.2 Transcript Type= protein_coding
chr18	26225936	26391685	26225936	26391685	+	ENST00000269142.9@TAF4B	ENST00000269142.9	protein_coding	26225936,26265170,26267516,26274663,26274931,26281971,26285882,26292246,26293426,26315229,26321070,26327015,26335175,26357690,26389845	26227276,26265315,26267623,26274824,26275053,26282060,26286499,26292381,26293531,26315398,26321200,26327140,26335231,26357794,26391685	Gene ID= ENSG00000141384.12 TPM= 3.5 Transcript Type= protein_coding
chr18	26852038	26865818	26852038	26865818	-	ENST00000383168.8@AQP4	ENST00000383168.8	protein_coding	26865658,26862182,26861131,26860772,26852038	26865818,26862596,26861295,26860852,26856489	Gene ID= ENSG00000171885.13 TPM= 378.3 Transcript Type= protein_coding
chr18	27950966	28177446	27950966	28177446	-	ENST00000269141.7@CDH2	ENST00000269141.7	protein_coding	28176963,28147673,28013683,28011846,28009717,28005849,28002997,27993500,27992655,27990097,27988524,27985528,27985000,27982944,27963357,27950966	28177446,28147784,28013909,28011992,28009872,28005993,28003169,27993637,27992840,27990350,27988666,27985761,27985233,27983083,27963521,27952359	Gene ID= ENSG00000170558.8 TPM= 4.67 Transcript Type= protein_coding
chr18	31065974	31102004	31065974	31102004	-	ENST00000251081.6@DSC2	ENST00000251081.6	protein_coding	31101903,31093559,31092101,31091028,31089439,31087669,31086576,31082926,31082238,31080096,31079847,31074683,31071605,31070726,31068894,31068299,31065974	31102004,31093643,31092300,31091147,31089594,31087813,31086742,31083060,31082423,31080352,31079989,31074907,31071841,31070850,31069151,31068344,31068212	Gene ID= ENSG00000134755.14 TPM= 9.34 Transcript Type= protein_coding
chr18	31498043	31549008	31498043	31549008	+	ENST00000261590.12@DSG2	ENST00000261590.12	protein_coding	31498043,31518239,31519803,31520803,31521099,31522083,31524448,31524703,31530987,31535270,31536202,31538751,31541193,31542520,31545721	31498296,31518274,31519937,31520964,31521243,31522249,31524585,31524888,31531252,31535412,31536429,31538978,31541314,31542852,31549008	Gene ID= ENSG00000046604.12 TPM= 4.67 Transcript Type= protein_coding
chr18	31829938	31943238	31829938	31943238	-	transcript1013.chr18.nnic@TRAPPC8	transcript1013.chr18.nnic	protein_coding	31942608,31931329,31917578,31916272,31909667,31908754,31908303,31907460,31900925,31897786,31890735,31874480,31873430,31870926,31870372,31867402,31866849,31864627,31857540,31855660,31853849,31852595,31852446,31849566,31846716,31839312,31832084,31829938	31943238,31931523,31917667,31916446,31909760,31909010,31908418,31907610,31901025,31897891,31890866,31874704,31873538,31871120,31870502,31867476,31866975,31864781,31857982,31855807,31853945,31852663,31852504,31849739,31846817,31839457,31832173,31830989	Gene ID= ENSG00000153339.13 TPM= 2.34 Transcript Type= NA
chr18	31829938	31943101	31829938	31943101	-	transcript1016.chr18.nnic@TRAPPC8	transcript1016.chr18.nnic	protein_coding	31942608,31931329,31917578,31916272,31913369,31909667,31908754,31908303,31907460,31900925,31897786,31890735,31874480,31873430,31870926,31870372,31867402,31866849,31864627,31853849,31852595,31852446,31849566,31846716,31839312,31832084,31829938	31943101,31931523,31917667,31916446,31913522,31909760,31909010,31908418,31907610,31901025,31897891,31890866,31874704,31873538,31871120,31870502,31867476,31866975,31864781,31853945,31852663,31852504,31849739,31846817,31839457,31832173,31830989	Gene ID= ENSG00000153339.13 TPM= 2.34 Transcript Type= NA
chr18	32018372	32073213	32018372	32073213	+	ENST00000217740.3@RNF125	ENST00000217740.3	protein_coding	32018372,32037116,32042179,32045642,32065902,32068298	32019027,32037269,32042273,32045732,32066009,32073213	Gene ID= ENSG00000101695.8 TPM= 11.68 Transcript Type= protein_coding
chr18	32018742	32046237	32018742	32046237	+	transcript1024.chr18.nic@AC011825.3	transcript1024.chr18.nic	processed_transcript	32018742,32037116,32042179,32045642	32019027,32037269,32042273,32046237	Gene ID= ENSG00000263917.1 TPM= 2.34 Transcript Type= NA
chr18	32091855	32131561	32091855	32131561	+	transcript1027.chr18.nnic@RNF138	transcript1027.chr18.nnic	protein_coding	32091855,32092700,32111754,32113745,32123518,32124734,32126693,32129119,32131025	32092235,32092886,32111919,32113860,32123574,32124845,32126800,32130976,32131561	Gene ID= ENSG00000134758.13 TPM= 8.17 Transcript Type= NA
chr18	32091855	32131561	32091855	32131561	+	transcript1029.chr18.nnic@RNF138	transcript1029.chr18.nnic	protein_coding	32091855,32092700,32111754,32113745,32123518,32124734,32126693,32129119,32131074	32092235,32092886,32111919,32113860,32123574,32124845,32126800,32131026,32131561	Gene ID= ENSG00000134758.13 TPM= 4.67 Transcript Type= NA
chr18	32091855	32131561	32091855	32131561	+	ENST00000261593.7@RNF138	ENST00000261593.7	protein_coding	32091855,32092700,32111754,32113745,32123518,32124734,32126693,32129119	32092235,32092886,32111919,32113860,32123574,32124845,32126800,32131561	Gene ID= ENSG00000134758.13 TPM= 15.18 Transcript Type= protein_coding
chr18	32092558	32131561	32092558	32131561	+	transcript1031.chr18.nnic@RNF138	transcript1031.chr18.nnic	protein_coding	32092558,32111754,32113745,32123518,32124734,32126693,32129119,32131025	32092886,32111919,32113860,32123574,32124845,32126800,32130976,32131561	Gene ID= ENSG00000134758.13 TPM= 7.01 Transcript Type= NA
chr18	32091855	32130715	32091855	32130715	+	transcript1036.chr18.nic@RNF138	transcript1036.chr18.nic	protein_coding	32091855,32092700,32123518,32124734,32126693,32129119	32092235,32092886,32123574,32124845,32126800,32130715	Gene ID= ENSG00000134758.13 TPM= 2.34 Transcript Type= NA
chr18	35041360	35143470	35041360	35143470	+	ENST00000300249.9@MAPRE2	ENST00000300249.9	protein_coding	35041360,35070195,35097446,35101946,35126948,35132032,35140295	35041661,35070322,35097591,35102159,35127087,35132190,35143470	Gene ID= ENSG00000166974.12 TPM= 63.05 Transcript Type= protein_coding
chr18	35241037	35249803	35241037	35249803	+	ENST00000330501.11@ZNF397	ENST00000330501.11	protein_coding	35241037,35242391,35243152,35245262	35241109,35242884,35243293,35249803	Gene ID= ENSG00000186812.12 TPM= 7.01 Transcript Type= protein_coding
chr18	35241056	35246723	35241056	35246723	+	transcript1057.chr18.nic@ZNF397	transcript1057.chr18.nic	protein_coding	35241056,35242391,35243152,35245262	35241690,35242884,35243293,35246723	Gene ID= ENSG00000186812.12 TPM= 3.5 Transcript Type= NA
chr18	35251061	35290246	35251061	35290246	-	transcript1058.chr18.nnic@ZSCAN30	transcript1058.chr18.nnic	protein_coding	35290131,35263945,35263476,35251061	35290246,35264455,35263657,35254381	Gene ID= ENSG00000186814.13 TPM= 2.34 Transcript Type= NA
chr18	35290282	35310766	35290282	35310766	+	ENST00000399070.3@ZNF271P	ENST00000399070.3	transcribed_unitary_pseudogene	35290282,35291010,35305976	35290391,35291232,35310766	Gene ID= ENSG00000257267.3 TPM= 3.5 Transcript Type= processed_transcript
chr18	35294473	35298140	35294473	35298140	-	transcript1077.chr18.nnic@NA	transcript1077.chr18.nnic	NA	35294473	35298140	Gene ID= novel_gene_chr18_1078 TPM= 5.84 Transcript Type= NA
chr18	35332212	35344456	35332212	35344456	-	ENST00000261332.10@ZNF24	ENST00000261332.10	protein_coding	35344360,35340231,35339829,35332212	35344456,35340733,35339976,35337770	Gene ID= ENSG00000172466.15 TPM= 2.34 Transcript Type= protein_coding
chr18	35332227	35344456	35332227	35344456	-	ENST00000399061.3@ZNF24	ENST00000399061.3	protein_coding	35344370,35340231,35339829,35332227	35344456,35340733,35339976,35337770	Gene ID= ENSG00000172466.15 TPM= 16.35 Transcript Type= protein_coding
chr18	35368471	35377337	35368471	35377337	-	ENST00000589332.5@ZNF396	ENST00000589332.5	protein_coding	35377278,35373876,35373456,35368471	35377337,35374364,35373600,35369660	Gene ID= ENSG00000186496.10 TPM= 2.34 Transcript Type= protein_coding
chr18	35445743	35467081	35445743	35467081	-	ENST00000591141.1@AC007998.3	ENST00000591141.1	lincRNA	35466624,35446875,35445743	35467081,35446955,35445900	Gene ID= ENSG00000267583.5 TPM= 2.34 Transcript Type= lincRNA
chr18	35468333	35497991	35468333	35497991	-	ENST00000334598.11@INO80C	ENST00000334598.11	protein_coding	35497719,35480453,35479300,35478282,35468333	35497991,35480563,35479411,35478349,35468742	Gene ID= ENSG00000153391.15 TPM= 12.84 Transcript Type= protein_coding
chr18	35466402	35468460	35466402	35468460	+	transcript1096.chr18.nnic@NA	transcript1096.chr18.nnic	NA	35466402	35468460	Gene ID= novel_gene_chr18_1097 TPM= 3.5 Transcript Type= NA
chr18	35581498	35711834	35581498	35711834	+	transcript1105.chr18.nnic@GALNT1	transcript1105.chr18.nnic	protein_coding	35581498,35627431,35654560,35663628,35677591,35683391,35687016,35689173,35691012,35692181,35702897,35703509,35709624	35581862,35627484,35654801,35663802,35677757,35683598,35687186,35689290,35691192,35692320,35702995,35703643,35711834	Gene ID= ENSG00000141429.13 TPM= 3.5 Transcript Type= NA
chr18	35580949	35711834	35580949	35711834	+	transcript1110.chr18.nic@GALNT1	transcript1110.chr18.nic	protein_coding	35580949,35654560,35663628,35677591,35683391,35687016,35689173,35691012,35692181,35702897,35703509,35709624	35581862,35654801,35663802,35677757,35683598,35687186,35689290,35691192,35692320,35702995,35703643,35711834	Gene ID= ENSG00000141429.13 TPM= 15.18 Transcript Type= NA
chr18	35654560	35711834	35654560	35711834	+	ENST00000269195.5@GALNT1	ENST00000269195.5	protein_coding	35654560,35663628,35677591,35683391,35687016,35689173,35691012,35692181,35702897,35703509,35709624	35654801,35663802,35677757,35683598,35687186,35689290,35691192,35692320,35702995,35703643,35711834	Gene ID= ENSG00000141429.13 TPM= 5.84 Transcript Type= protein_coding
chr18	35972083	35979278	35972083	35979278	+	ENST00000592875.5@C18orf21	ENST00000592875.5	protein_coding	35972083,35972885,35974896,35977410,35978835	35972805,35972907,35975095,35977600,35979278	Gene ID= ENSG00000141428.16 TPM= 4.67 Transcript Type= protein_coding
chr18	35972625	35979286	35972625	35979286	+	ENST00000610527.4@C18orf21	ENST00000610527.4	protein_coding	35972625,35974896,35977410,35978835	35972840,35975095,35977600,35979286	Gene ID= ENSG00000141428.16 TPM= 1.17 Transcript Type= protein_coding
chr18	35980139	35982205	35980139	35982205	-	transcript1129.chr18.nnic@NA	transcript1129.chr18.nnic	NA	35980139	35982205	Gene ID= novel_gene_chr18_1130 TPM= 17.51 Transcript Type= NA
chr18	35989824	36067576	35989824	36067576	-	ENST00000399022.8@RPRD1A	ENST00000399022.8	protein_coding	36067254,36033708,36030991,36030808,36027184,36026900,35989824	36067576,36033837,36031097,36030905,36027310,36027075,35993300	Gene ID= ENSG00000141425.17 TPM= 51.37 Transcript Type= protein_coding
chr18	36024314	36067579	36024314	36067579	-	transcript1138.chr18.nic@RPRD1A	transcript1138.chr18.nic	protein_coding	36067254,36033708,36030991,36030808,36027184,36024314	36067579,36033837,36031097,36030905,36027310,36027075	Gene ID= ENSG00000141425.17 TPM= 2.34 Transcript Type= NA
chr18	36111000	36129407	36111000	36129407	-	transcript1147.chr18.nic@SLC39A6	transcript1147.chr18.nic	protein_coding	36129114,36126219,36124520,36123495,36122052,36116674,36114097,36112501,36111000	36129407,36127016,36124700,36123664,36122270,36116779,36114474,36112581,36111249	Gene ID= ENSG00000141424.12 TPM= 3.5 Transcript Type= NA
chr18	36108532	36129318	36108532	36129318	-	ENST00000269187.9@SLC39A6	ENST00000269187.9	protein_coding	36129114,36126219,36124520,36123495,36122052,36116674,36114097,36112501,36111059,36108532	36129318,36127016,36124700,36123664,36122270,36116779,36114474,36112581,36111249,36109745	Gene ID= ENSG00000141424.12 TPM= 53.71 Transcript Type= protein_coding
chr18	36129871	36180556	36129871	36180556	+	ENST00000358232.10@ELP2	ENST00000358232.10	protein_coding	36129871,36133238,36136307,36138270,36138795,36141137,36142281,36142826,36144939,36145948,36146250,36154850,36156466,36158835,36159735,36159958,36160932,36164475,36167101,36170063,36171047,36174485	36130071,36133316,36136377,36138426,36138872,36141201,36142347,36142966,36145034,36146048,36146381,36154999,36156654,36158904,36159830,36160015,36161004,36164667,36167222,36170196,36171160,36180556	Gene ID= ENSG00000134759.13 TPM= 42.03 Transcript Type= protein_coding
chr18	36129891	36174648	36129891	36174648	+	ENST00000351393.10@ELP2	ENST00000351393.10	protein_coding	36129891,36133238,36136307,36138270,36141137,36142281,36142826,36144939,36145948,36146250,36154850,36156466,36158835,36159735,36159958,36160932,36164475,36167101,36170063,36171047,36174485	36130071,36133316,36136377,36138426,36141201,36142347,36142966,36145034,36146048,36146381,36154999,36156654,36158904,36159830,36160015,36161004,36164667,36167222,36170196,36171160,36174648	Gene ID= ENSG00000134759.13 TPM= 1.17 Transcript Type= protein_coding
chr18	36129898	36174651	36129898	36174651	+	ENST00000442325.6@ELP2	ENST00000442325.6	protein_coding	36129898,36133238,36136307,36138270,36138795,36139419,36141137,36142281,36142826,36144939,36145948,36146250,36154850,36156466,36158835,36159735,36159958,36160932,36164475,36167101,36170063,36171047,36174485	36130071,36133316,36136377,36138426,36138872,36139613,36141201,36142347,36142966,36145034,36146048,36146381,36154999,36156654,36158904,36159830,36160015,36161004,36164667,36167222,36170196,36171160,36174651	Gene ID= ENSG00000134759.13 TPM= 11.68 Transcript Type= protein_coding
chr18	36186903	36190271	36186903	36190271	+	transcript1185.chr18.nnic@NA	transcript1185.chr18.nnic	NA	36186903	36190271	Gene ID= novel_gene_chr18_1186 TPM= 4.67 Transcript Type= NA
chr18	36780024	36829027	36780024	36829027	-	transcript1189.chr18.nic@TPGS2	transcript1189.chr18.nic	protein_coding	36828683,36818894,36807847,36805374,36800198,36798449,36781799,36780024	36829027,36818973,36807934,36805502,36800311,36798609,36781922,36780188	Gene ID= ENSG00000134779.14 TPM= 3.5 Transcript Type= NA
chr18	36780027	36829216	36780027	36829216	-	ENST00000614939.4@TPGS2	ENST00000614939.4	protein_coding	36828683,36818894,36807847,36805374,36800198,36798449,36780027	36829216,36818973,36807934,36805502,36800311,36798609,36780188	Gene ID= ENSG00000134779.14 TPM= 2.34 Transcript Type= protein_coding
chr18	36786573	36828982	36786573	36828982	-	transcript1197.chr18.nic@TPGS2	transcript1197.chr18.nic	protein_coding	36828683,36818894,36807847,36805374,36800198,36798449,36786573	36828982,36818973,36807934,36805502,36800311,36798609,36786982	Gene ID= ENSG00000134779.14 TPM= 2.34 Transcript Type= NA
chr18	36794106	36829195	36794106	36829195	-	ENST00000334295.8@TPGS2	ENST00000334295.8	protein_coding	36828683,36818894,36807847,36805374,36800198,36798449,36794106	36829195,36818973,36807934,36805502,36800311,36798609,36797050	Gene ID= ENSG00000134779.14 TPM= 64.22 Transcript Type= protein_coding
chr18	36796072	36828986	36796072	36828986	-	ENST00000383056.7@TPGS2	ENST00000383056.7	protein_coding	36828683,36818894,36807847,36800198,36798449,36796072	36828986,36818973,36807934,36800311,36798609,36797050	Gene ID= ENSG00000134779.14 TPM= 2.34 Transcript Type= protein_coding
chr18	36788693	36791820	36788693	36791820	-	transcript1211.chr18.nnic@NA	transcript1211.chr18.nnic	NA	36788693	36791820	Gene ID= novel_gene_chr18_1212 TPM= 2.34 Transcript Type= NA
chr18	43267878	43277650	43267878	43277650	-	ENST00000255224.7@SYT4	ENST00000255224.7	protein_coding	43277248,43273580,43271712,43267878	43277650,43274394,43271832,43270648	Gene ID= ENSG00000132872.11 TPM= 1.17 Transcript Type= protein_coding
chr18	45983536	46042961	45983536	46042961	-	transcript1224.chr18.nnic@PSTPIP2	transcript1224.chr18.nnic	protein_coding	46042830,46039947,46024609,46015903,46011181,46005469,45999436,45998794,45997749,45993605,45992106,45991902,45990722,45988702,45983536	46042961,46040047,46024686,46015937,46011287,46005531,45999534,45998839,45997828,45993703,45992202,45991983,45990756,45988759,45985450	Gene ID= ENSG00000152229.18 TPM= 3.12 Transcript Type= NA
chr18	45983536	46072311	45983536	46072311	-	transcript1226.chr18.nnic@PSTPIP2	transcript1226.chr18.nnic	protein_coding	46072156,46039947,46015903,46011181,46005469,45999436,45998794,45997749,45993605,45992106,45991902,45990722,45988702,45983536	46072311,46040047,46015937,46011287,46005531,45999534,45998839,45997828,45993703,45992202,45991983,45990756,45988759,45985450	Gene ID= ENSG00000152229.18 TPM= 3.12 Transcript Type= NA
chr18	45983536	46072260	45983536	46072260	-	ENST00000409746.5@PSTPIP2	ENST00000409746.5	protein_coding	46072156,46039947,46024609,46015903,46011181,46005469,45999436,45998794,45997749,45993605,45992106,45991902,45990722,45988702,45983536	46072260,46040047,46024686,46015937,46011287,46005531,45999534,45998839,45997828,45993703,45992202,45991983,45990756,45988759,45985450	Gene ID= ENSG00000152229.18 TPM= 24.13 Transcript Type= protein_coding
chr18	46080248	46098353	46080248	46098353	-	ENST00000398752.10@ATP5A1	ENST00000398752.10	protein_coding	46098172,46095053,46091682,46089823,46089566,46088109,46087341,46087008,46086387,46086113,46084504,46080248	46098353,46095131,46091851,46089996,46089732,46088257,46087492,46087232,46086494,46086257,46084654,46084363	Gene ID= ENSG00000152234.15 TPM= 458.08 Transcript Type= protein_coding
chr18	46084150	46098295	46084150	46098295	-	ENST00000590156.5@ATP5A1	ENST00000590156.5	protein_coding	46098172,46094980,46091682,46089823,46089566,46088109,46087341,46087008,46086387,46086113,46084504,46084150	46098295,46095131,46091851,46089996,46089732,46088257,46087492,46087232,46086494,46086257,46084654,46084363	Gene ID= ENSG00000152234.15 TPM= 1.55 Transcript Type= nonsense_mediated_decay
chr18	46104332	46128333	46104332	46128333	+	ENST00000282058.10@HAUS1	ENST00000282058.10	protein_coding	46104332,46105194,46118181,46119926,46122467,46123299,46124822,46125744,46128075	46104441,46105368,46118316,46120060,46122590,46123364,46124893,46125791,46128333	Gene ID= ENSG00000152240.12 TPM= 10.51 Transcript Type= protein_coding
chr18	46174034	46266983	46174034	46266983	+	ENST00000619301.4@C18orf25	ENST00000619301.4	protein_coding	46174034,46215811,46253697,46262929	46174330,46216595,46253823,46266983	Gene ID= ENSG00000152242.10 TPM= 25.69 Transcript Type= protein_coding
chr18	46174027	46266991	46174027	46266991	+	ENST00000615052.4@C18orf25	ENST00000615052.4	protein_coding	46174027,46215811,46240005,46253697,46262929	46174330,46216595,46240187,46253823,46266991	Gene ID= ENSG00000152242.10 TPM= 5.84 Transcript Type= protein_coding
chr18	46810442	46917503	46810442	46917503	-	transcript1259.chr18.nic@PIAS2	transcript1259.chr18.nic	protein_coding	46917322,46903527,46890580,46864164,46855565,46855345,46846707,46844734,46844054,46836357,46829734,46827959,46820933,46815312,46810442	46917503,46903635,46891054,46864248,46855615,46855435,46846841,46844839,46844127,46836517,46829867,46828130,46821072,46815349,46812612	Gene ID= ENSG00000078043.15 TPM= 4.67 Transcript Type= NA
chr18	46815711	46917503	46815711	46917503	-	ENST00000324794.11@PIAS2	ENST00000324794.11	protein_coding	46917322,46890580,46864164,46855565,46855345,46846707,46844734,46844054,46836357,46829734,46827959,46820933,46815711	46917503,46891054,46864248,46855615,46855435,46846841,46844839,46844127,46836517,46829867,46828130,46821072,46818447	Gene ID= ENSG00000078043.15 TPM= 3.5 Transcript Type= protein_coding
chr18	46827758	46917474	46827758	46917474	-	ENST00000590127.5@PIAS2	ENST00000590127.5	protein_coding	46917322,46890580,46864164,46855565,46855345,46846707,46844734,46844054,46836357,46829734,46827758	46917474,46891054,46864248,46855615,46855435,46846841,46844839,46844127,46836517,46829867,46828130	Gene ID= ENSG00000078043.15 TPM= 1.17 Transcript Type= retained_intron
chr18	46821093	46823086	46821093	46823086	+	transcript1276.chr18.nnic@NA	transcript1276.chr18.nnic	NA	46821093	46823086	Gene ID= novel_gene_chr18_1277 TPM= 3.5 Transcript Type= NA
chr18	47107408	47150494	47107408	47150494	-	transcript1284.chr18.nic@HDHD2	transcript1284.chr18.nic	protein_coding	47150378,47149049,47136339,47134496,47130244,47115132,47112977,47107408	47150494,47149108,47136449,47134704,47130328,47115348,47113040,47108785	Gene ID= ENSG00000167220.11 TPM= 2.63 Transcript Type= NA
chr18	47107403	47150520	47107403	47150520	-	ENST00000300605.10@HDHD2	ENST00000300605.10	protein_coding	47150378,47136339,47134496,47130244,47115132,47112977,47107403	47150520,47136449,47134704,47130328,47115348,47113040,47108785	Gene ID= ENSG00000167220.11 TPM= 37.65 Transcript Type= protein_coding
chr18	47107408	47150516	47107408	47150516	-	transcript1294.chr18.nnic@HDHD2	transcript1294.chr18.nnic	protein_coding	47150378,47136339,47130244,47115132,47112977,47107408	47150516,47136449,47130328,47115348,47113040,47108785	Gene ID= ENSG00000167220.11 TPM= 2.63 Transcript Type= NA
chr18	47107408	47150500	47107408	47150500	-	ENST00000588183.5@HDHD2	ENST00000588183.5	protein_coding	47150378,47136302,47134496,47130244,47115132,47112977,47107408	47150500,47136449,47134704,47130328,47115348,47113040,47108785	Gene ID= ENSG00000167220.11 TPM= 17.81 Transcript Type= nonsense_mediated_decay
chr18	47841225	47931149	47841225	47931149	-	transcript1300.chr18.nic@SMAD2	transcript1300.chr18.nic	protein_coding	47930800,47930361,47920072,47896521,47870475,47869243,47868323,47865059,47851274,47848475,47845663,47845340,47841225	47931149,47930446,47920169,47896809,47870564,47869436,47868457,47865133,47851327,47848687,47845800,47845484,47841950	Gene ID= ENSG00000175387.15 TPM= 3.5 Transcript Type= NA
chr18	47840255	47931149	47840255	47931149	-	transcript1303.chr18.nic@SMAD2	transcript1303.chr18.nic	protein_coding	47930800,47930361,47896521,47870475,47869243,47868323,47865059,47851274,47848475,47845663,47845340,47840255	47931149,47930446,47896809,47870564,47869436,47868457,47865133,47851327,47848687,47845800,47845484,47841950	Gene ID= ENSG00000175387.15 TPM= 14.01 Transcript Type= NA
chr18	48027362	48040710	48027362	48040710	-	transcript1331.chr18.nic@ZBTB7C	transcript1331.chr18.nic	protein_coding	48039900,48027362	48040710,48029911	Gene ID= ENSG00000184828.9 TPM= 12.84 Transcript Type= NA
chr18	48342829	48353073	48342829	48353073	+	transcript1332.chr18.nnic@NA	transcript1332.chr18.nnic	NA	48342829,48343516,48351259	48343118,48343615,48353073	Gene ID= novel_gene_chr18_1333 TPM= 3.5 Transcript Type= NA
chr18	48539046	48863217	48539046	48863217	+	ENST00000256413.7@CTIF	ENST00000256413.7	protein_coding	48539046,48619538,48636614,48663752,48664447,48670669,48711619,48757919,48761390,48817221,48857588,48859344	48539312,48619745,48636685,48663825,48664551,48670744,48711695,48758405,48761689,48817376,48857641,48863217	Gene ID= ENSG00000134030.13 TPM= 18.68 Transcript Type= protein_coding
chr18	48760182	48860565	48760182	48860565	+	ENST00000587860.1@CTIF	ENST00000587860.1	protein_coding	48760182,48817221,48857588,48859344	48761689,48817376,48857641,48860565	Gene ID= ENSG00000134030.13 TPM= 2.34 Transcript Type= retained_intron
chr18	48539158	48861906	48539158	48861906	+	ENST00000382998.8@CTIF	ENST00000382998.8	protein_coding	48539158,48539758,48619538,48636614,48663752,48664447,48670669,48711619,48757919,48761390,48817221,48857588,48859344	48539312,48539831,48619745,48636685,48663825,48664551,48670744,48711695,48758411,48761689,48817376,48857641,48861906	Gene ID= ENSG00000134030.13 TPM= 24.52 Transcript Type= protein_coding
chr18	48760186	48860346	48760186	48860346	-	transcript1345.chr18.nnic@AC093567.1	transcript1345.chr18.nnic	antisense_RNA	48859342,48857586,48817219,48760186	48860346,48857641,48817376,48761689	Gene ID= ENSG00000267764.1 TPM= 28.02 Transcript Type= NA
chr18	48919948	48950796	48919948	48950796	-	transcript1350.chr18.nnic@SMAD7	transcript1350.chr18.nnic	protein_coding	48950230,48949812,48948384,48942481,48919948	48950796,48950172,48948437,48942555,48921910	Gene ID= ENSG00000101665.8 TPM= 12.84 Transcript Type= NA
chr18	48947299	48951345	48947299	48951345	+	transcript1356.chr18.nnic@NA	transcript1356.chr18.nnic	NA	48947299	48951345	Gene ID= novel_gene_chr18_1357 TPM= 29.19 Transcript Type= NA
chr18	49041474	49460802	49041474	49460802	-	ENST00000269445.10@DYM	ENST00000269445.10	protein_coding	49460398,49430255,49391593,49379665,49378567,49363161,49333728,49331864,49286434,49281997,49272178,49258380,49257010,49163685,49118744,49097402,49041474	49460802,49430447,49391645,49379758,49378700,49363233,49333853,49332006,49286616,49282175,49272303,49258493,49257104,49163787,49118926,49097515,49044204	Gene ID= ENSG00000141627.13 TPM= 9.34 Transcript Type= protein_coding
chr18	49481660	49487231	49481660	49487231	-	ENST00000318240.7@C18orf32	ENST00000318240.7	protein_coding	49487043,49483584,49481660	49487231,49483771,49482410	Gene ID= ENSG00000177576.11 TPM= 47.87 Transcript Type= protein_coding
chr18	49488453	49492482	49488453	49492482	-	ENST00000618619.4@RPL17	ENST00000618619.4	protein_coding	49492458,49491746,49491532,49491405,49490793,49490454,49489359,49488453	49492482,49491833,49491584,49491445,49490927,49490552,49489550,49488566	Gene ID= ENSG00000265681.7 TPM= 5.84 Transcript Type= protein_coding
chr18	49488484	49492523	49488484	49492523	-	ENST00000580261.5@RPL17	ENST00000580261.5	protein_coding	49492458,49491532,49491405,49490793,49490454,49489359,49488484	49492523,49491584,49491445,49490927,49490552,49489550,49488566	Gene ID= ENSG00000265681.7 TPM= 350.57 Transcript Type= protein_coding
chr18	49488484	49492486	49488484	49492486	-	transcript1388.chr18.nic@RPL17	transcript1388.chr18.nic	protein_coding	49492458,49491532,49491405,49490793,49490454,49489359,49488484	49492486,49491833,49491445,49490927,49490552,49489550,49488566	Gene ID= ENSG00000265681.7 TPM= 17.81 Transcript Type= NA
chr18	49488484	49492444	49488484	49492444	-	ENST00000579248.5@RPL17	ENST00000579248.5	protein_coding	49492258,49491532,49491405,49490793,49490454,49489359,49488484	49492444,49491584,49491445,49490927,49490552,49489550,49488566	Gene ID= ENSG00000265681.7 TPM= 25.98 Transcript Type= protein_coding
chr18	49562031	49599182	49562031	49599182	+	ENST00000261292.8@LIPG	ENST00000261292.8	protein_coding	49562031,49565317,49567442,49569437,49575369,49581415,49582362,49583556,49586746,49590501	49562405,49565498,49567621,49569548,49575590,49581657,49582482,49583774,49586850,49599182	Gene ID= ENSG00000101670.11 TPM= 3.5 Transcript Type= protein_coding
chr18	49562087	49581852	49562087	49581852	+	ENST00000580036.5@LIPG	ENST00000580036.5	protein_coding	49562087,49565317,49567442,49569437,49575369,49581415	49562405,49565498,49567621,49569548,49575590,49581852	Gene ID= ENSG00000101670.11 TPM= 1.17 Transcript Type= protein_coding
chr18	49782167	49813960	49782167	49813960	-	ENST00000285093.14@ACAA2	ENST00000285093.14	protein_coding	49813469,49802687,49797466,49795765,49794280,49792152,49791470,49787291,49785197,49782167	49813960,49802853,49797594,49795881,49794427,49792327,49791599,49787361,49785351,49783931	Gene ID= ENSG00000167315.17 TPM= 78.23 Transcript Type= protein_coding
chr18	49826260	50195208	49826260	50195208	-	transcript1409.chr18.nic@MYO5B	transcript1409.chr18.nic	protein_coding	50194767,50055268,50040143,50036850,50001255,49992288,49990439,49984718,49980444,49974350,49962949,49962266,49954313,49953260,49937245,49936252,49929512,49912062,49906419,49904672,49902594,49894941,49880371,49878945,49877763,49875687,49872167,49864141,49863227,49853449,49849567,49847146,49843241,49841365,49839144,49837517,49836711,49835344,49826260	50195208,50055378,50040314,50036994,50001411,49992431,49990520,49984825,49980553,49974615,49963030,49962406,49954435,49953343,49937397,49936349,49929598,49912173,49906630,49904828,49902833,49895174,49880455,49879090,49877882,49875827,49872232,49864380,49863327,49853647,49849660,49847289,49843392,49841454,49839294,49837802,49836885,49835424,49826623	Gene ID= ENSG00000167306.19 TPM= 19.85 Transcript Type= NA
chr18	49950675	49957165	49950675	49957165	-	transcript1416.chr18.nic@MYO5B	transcript1416.chr18.nic	protein_coding	49954313,49950675	49957165,49953343	Gene ID= ENSG00000167306.19 TPM= 2.34 Transcript Type= NA
chr18	49822813	50195093	49822813	50195093	-	ENST00000285039.11@MYO5B	ENST00000285039.11	protein_coding	50194767,50055268,50040143,50036850,50001255,49992288,49990439,49984718,49980444,49974350,49962949,49962266,49954313,49953260,49937245,49936252,49929512,49912062,49906419,49904672,49902594,49894941,49880371,49878945,49877763,49875687,49872167,49864141,49863227,49856813,49853449,49849567,49847146,49843241,49841365,49839144,49837517,49836711,49835344,49822813	50195093,50055378,50040314,50036994,50001411,49992431,49990520,49984825,49980553,49974615,49963030,49962406,49954435,49953343,49937397,49936349,49929598,49912173,49906630,49904828,49902833,49895174,49880455,49879090,49877882,49875827,49872232,49864380,49863327,49856890,49853647,49849660,49847289,49843392,49841454,49839294,49837802,49836885,49835424,49826623	Gene ID= ENSG00000167306.19 TPM= 9.34 Transcript Type= protein_coding
chr18	49826290	49849846	49826290	49849846	-	ENST00000592688.1@MYO5B	ENST00000592688.1	protein_coding	49849567,49847146,49843241,49841365,49839144,49837517,49836711,49835344,49826290	49849846,49847289,49843392,49841454,49839294,49837802,49836885,49835424,49826623	Gene ID= ENSG00000167306.19 TPM= 2.34 Transcript Type= protein_coding
chr18	50268847	50281479	50268847	50281479	-	transcript1418.chr18.nic@MBD1	transcript1418.chr18.nic	protein_coding	50281363,50279883,50277090,50276832,50276662,50276378,50275835,50275600,50275129,50274977,50274186,50273564,50273334,50272824,50272677,50271469,50268847	50281479,50280017,50277204,50276998,50276744,50276418,50275981,50275728,50275245,50275045,50274353,50273863,50273426,50272955,50272738,50271540,50269818	Gene ID= ENSG00000141644.17 TPM= 5.64 Transcript Type= NA
chr18	50268847	50281797	50268847	50281797	-	transcript1429.chr18.nic@MBD1	transcript1429.chr18.nic	protein_coding	50281363,50279883,50277090,50276832,50276662,50276378,50275835,50275600,50275129,50274977,50274186,50273564,50272824,50272677,50271469,50268847	50281797,50280017,50277204,50276998,50276744,50276418,50275981,50275728,50275245,50275045,50274353,50273863,50272955,50272738,50271540,50269818	Gene ID= ENSG00000141644.17 TPM= 5.64 Transcript Type= NA
chr18	50268847	50281525	50268847	50281525	-	transcript1430.chr18.nic@MBD1	transcript1430.chr18.nic	protein_coding	50281363,50279883,50277090,50276832,50276662,50276378,50275835,50275600,50275129,50274977,50274186,50273564,50273334,50272824,50272677,50268847	50281525,50280017,50277204,50276998,50276744,50276418,50275981,50275728,50275245,50275045,50274353,50273863,50273426,50272955,50272738,50269818	Gene ID= ENSG00000141644.17 TPM= 6.81 Transcript Type= NA
chr18	50268847	50281528	50268847	50281528	-	transcript1443.chr18.nic@MBD1	transcript1443.chr18.nic	protein_coding	50281363,50279883,50277090,50276832,50276662,50276378,50275835,50275600,50275129,50274977,50273564,50273334,50272824,50272677,50268847	50281528,50280017,50277204,50276998,50276744,50276418,50275981,50275728,50275245,50275045,50273863,50273471,50272955,50272738,50269818	Gene ID= ENSG00000141644.17 TPM= 6.42 Transcript Type= NA
chr18	50282347	50287842	50282347	50287842	-	transcript1471.chr18.nnic@CXXC1	transcript1471.chr18.nnic	protein_coding	50287587,50286740,50286539,50286022,50285749,50285325,50284924,50284732,50284378,50283894,50283705,50283515,50283265,50282854,50282347	50287842,50286858,50286639,50286257,50285928,50285351,50285247,50284839,50284562,50284101,50283815,50283564,50283361,50283006,50282739	Gene ID= ENSG00000154832.14 TPM= 5.28 Transcript Type= NA
chr18	50282347	50287848	50282347	50287848	-	transcript1482.chr18.nic@CXXC1	transcript1482.chr18.nic	protein_coding	50287587,50286740,50286539,50285749,50285325,50285002,50284732,50284378,50283894,50283705,50283515,50283265,50282854,50282347	50287848,50286858,50286639,50286257,50285351,50285247,50284839,50284562,50284101,50283815,50283564,50283361,50283006,50282739	Gene ID= ENSG00000154832.14 TPM= 6.45 Transcript Type= NA
chr18	50282347	50288330	50282347	50288330	-	transcript1483.chr18.nic@CXXC1	transcript1483.chr18.nic	protein_coding	50287587,50286740,50286539,50286022,50285749,50285325,50285002,50284732,50284378,50283894,50283515,50283265,50282854,50282347	50288330,50286858,50286639,50286257,50285928,50285351,50285247,50284839,50284562,50284101,50283815,50283361,50283006,50282739	Gene ID= ENSG00000154832.14 TPM= 5.8 Transcript Type= NA
chr18	50282347	50287685	50282347	50287685	-	transcript1488.chr18.nic@CXXC1	transcript1488.chr18.nic	protein_coding	50287587,50286740,50286539,50286022,50285002,50284732,50284378,50283894,50283705,50283515,50283265,50282854,50282347	50287685,50286858,50286639,50286257,50285928,50284839,50284562,50284101,50283815,50283564,50283361,50283006,50282739	Gene ID= ENSG00000154832.14 TPM= 6.15 Transcript Type= NA
chr18	50282343	50288304	50282343	50288304	-	ENST00000285106.10@CXXC1	ENST00000285106.10	protein_coding	50287587,50286740,50286539,50286022,50285749,50285325,50285002,50284732,50284378,50283894,50283705,50283515,50283265,50282854,50282343	50288304,50286858,50286639,50286257,50285928,50285351,50285247,50284839,50284562,50284101,50283815,50283564,50283361,50283006,50282739	Gene ID= ENSG00000154832.14 TPM= 68.04 Transcript Type= protein_coding
chr18	50282347	50287651	50282347	50287651	-	ENST00000589940.5@CXXC1	ENST00000589940.5	protein_coding	50287587,50286740,50286539,50286022,50285749,50285325,50285002,50284732,50284378,50283894,50283705,50283515,50283265,50282854,50282347	50287651,50286858,50286639,50286257,50285928,50285351,50285247,50284839,50284562,50284101,50283815,50283564,50283324,50283006,50282739	Gene ID= ENSG00000154832.14 TPM= 1.46 Transcript Type= protein_coding
chr18	50650042	50731824	50650042	50731824	+	transcript1503.chr18.nnic@MAPK4	transcript1503.chr18.nnic	protein_coding	50650042,50663089,50715079,50729158	50650279,50664504,50715223,50731824	Gene ID= ENSG00000141639.11 TPM= 3.5 Transcript Type= NA
chr18	50560078	50731824	50560078	50731824	+	ENST00000400384.6@MAPK4	ENST00000400384.6	protein_coding	50560078,50663089,50715079,50721938,50725962,50729158	50560243,50664504,50715223,50722099,50726175,50731824	Gene ID= ENSG00000141639.11 TPM= 11.68 Transcript Type= protein_coding
chr18	50878734	50954257	50878734	50954257	+	ENST00000321341.10@ME2	ENST00000321341.10	protein_coding	50878734,50895809,50908063,50912801,50916168,50917347,50918110,50920456,50920661,50921074,50924098,50925756,50932258,50939570,50940288,50947017	50879308,50895928,50908196,50912950,50916243,50917508,50918213,50920565,50920758,50921187,50924212,50925898,50932360,50939640,50940386,50954257	Gene ID= ENSG00000082212.12 TPM= 33.28 Transcript Type= protein_coding
chr18	50879120	50947890	50879120	50947890	+	ENST00000382927.3@ME2	ENST00000382927.3	protein_coding	50879120,50895809,50908063,50912801,50916168,50917347,50918110,50920456,50920661,50921074,50924098,50925756,50932258,50947017	50879308,50895928,50908196,50912950,50916243,50917508,50918213,50920565,50920758,50921187,50924212,50925898,50932360,50947890	Gene ID= ENSG00000082212.12 TPM= 1.75 Transcript Type= protein_coding
chr18	50968016	50988121	50968016	50988121	+	ENST00000269466.7@ELAC1	ENST00000269466.7	protein_coding	50968016,50974397,50984096,50986619	50968114,50974561,50984563,50988121	Gene ID= ENSG00000141642.8 TPM= 5.84 Transcript Type= protein_coding
chr18	50968027	51079777	50968027	51079777	+	transcript1510.chr18.nic@SMAD4	transcript1510.chr18.nic	protein_coding	50968027,50974397,51046920,51048686,51049295,51054781,51058125,51058340,51059866,51065423,51067019,51076638,51078256	50968114,50974561,51047295,51048860,51049324,51054993,51058244,51058456,51059916,51065606,51067187,51076776,51079777	Gene ID= ENSG00000141646.13 TPM= 10.89 Transcript Type= NA
chr18	51030196	51079777	51030196	51079777	+	transcript1512.chr18.nic@SMAD4	transcript1512.chr18.nic	protein_coding	51030196,51046920,51048686,51049295,51054781,51058125,51058340,51059866,51065423,51067019,51076638,51077307,51078256	51030623,51047295,51048860,51049324,51054993,51058244,51058456,51059916,51065606,51067187,51076776,51077419,51079777	Gene ID= ENSG00000141646.13 TPM= 5.45 Transcript Type= NA
chr18	51030196	51079777	51030196	51079777	+	transcript1518.chr18.nnic@SMAD4	transcript1518.chr18.nnic	protein_coding	51030196,51046920,51048686,51049295,51054781,51059866,51065423,51067019,51076638,51078256	51030623,51047295,51048860,51049324,51054993,51059916,51065606,51067187,51076776,51079777	Gene ID= ENSG00000141646.13 TPM= 8.96 Transcript Type= NA
chr18	51026198	51028049	51026198	51028049	+	transcript1525.chr18.nnic@NA	transcript1525.chr18.nnic	NA	51026198	51028049	Gene ID= novel_gene_chr18_1526 TPM= 5.84 Transcript Type= NA
chr18	51174552	51197591	51174552	51197591	-	transcript1527.chr18.nnic@MEX3C	transcript1527.chr18.nnic	protein_coding	51197270,51196567,51174552	51197591,51196764,51177576	Gene ID= ENSG00000176624.10 TPM= 7.01 Transcript Type= NA
chr18	54154840	54224663	54154840	54224663	-	transcript1531.chr18.nic@MBD2	transcript1531.chr18.nic	protein_coding	54224018,54204998,54188874,54187714,54166076,54164523,54159765,54154840	54224663,54205157,54189011,54187837,54166166,54164700,54159903,54155311	Gene ID= ENSG00000134046.11 TPM= 10.89 Transcript Type= NA
chr18	54151601	54224788	54151601	54224788	-	ENST00000256429.7@MBD2	ENST00000256429.7	protein_coding	54224018,54204998,54188874,54166076,54164523,54159765,54151601	54224788,54205157,54189011,54166166,54164700,54159903,54155311	Gene ID= ENSG00000134046.11 TPM= 240.91 Transcript Type= protein_coding
chr18	54269404	54298234	54269404	54298234	+	ENST00000579534.5@POLI	ENST00000579534.5	protein_coding	54269404,54271360,54273926,54277703,54280667,54282837,54283922,54287281,54291833,54293649	54269661,54271485,54274090,54277855,54280903,54283015,54284013,54287411,54292038,54298234	Gene ID= ENSG00000101751.10 TPM= 19.85 Transcript Type= protein_coding
chr18	54269558	54294724	54269558	54294724	+	transcript1540.chr18.nnic@POLI	transcript1540.chr18.nnic	protein_coding	54269558,54271360,54273926,54277703,54280667,54282837,54283922,54287281,54291833,54293649	54269699,54271485,54274090,54277855,54280903,54283015,54284013,54287411,54292038,54294724	Gene ID= ENSG00000101751.10 TPM= 2.34 Transcript Type= NA
chr18	54269572	54298234	54269572	54298234	+	transcript1542.chr18.nic@POLI	transcript1542.chr18.nic	protein_coding	54269572,54271360,54273926,54277703,54280667,54282837,54283922,54287281,54291833,54293649	54270032,54271485,54274090,54277855,54280903,54283015,54284013,54287411,54292038,54298234	Gene ID= ENSG00000101751.10 TPM= 3.5 Transcript Type= NA
chr18	54269749	54294724	54269749	54294724	+	transcript1546.chr18.nic@POLI	transcript1546.chr18.nic	protein_coding	54269749,54273926,54277703,54280667,54282837,54283922,54287281,54291833,54293649	54271485,54274090,54277855,54280903,54283015,54284013,54287411,54292038,54294724	Gene ID= ENSG00000101751.10 TPM= 3.5 Transcript Type= NA
chr18	54828199	54895516	54828199	54895516	+	ENST00000262094.9@RAB27B	ENST00000262094.9	protein_coding	54828199,54877567,54879369,54884333,54887995,54889224	54828700,54877738,54879454,54884436,54888118,54895516	Gene ID= ENSG00000041353.9 TPM= 12.84 Transcript Type= protein_coding
chr18	54901509	54959508	54901509	54959508	-	ENST00000591504.5@CCDC68	ENST00000591504.5	protein_coding	54959336,54945388,54942675,54940997,54937957,54936833,54934820,54928800,54919271,54917913,54907786,54901509	54959508,54945477,54942803,54941083,54938097,54936958,54934948,54928882,54919376,54917996,54907862,54904415	Gene ID= ENSG00000166510.13 TPM= 18.97 Transcript Type= protein_coding
chr18	54901509	54959472	54901509	54959472	-	transcript1563.chr18.nnic@CCDC68	transcript1563.chr18.nnic	protein_coding	54959336,54945426,54942675,54940997,54937957,54936833,54934820,54928800,54919271,54917913,54907786,54901509	54959472,54945477,54942799,54941083,54938097,54936958,54934948,54928882,54919376,54917996,54907862,54904415	Gene ID= ENSG00000166510.13 TPM= 2.63 Transcript Type= NA
chr18	54901563	54959461	54901563	54959461	-	transcript1567.chr18.nnic@CCDC68	transcript1567.chr18.nnic	protein_coding	54959183,54945426,54942675,54940997,54937957,54936833,54934820,54928800,54919271,54917913,54907786,54901563	54959461,54945477,54942799,54941083,54938097,54936958,54934948,54928882,54919376,54917996,54907862,54904415	Gene ID= ENSG00000166510.13 TPM= 2.63 Transcript Type= NA
chr18	54901563	54959461	54901563	54959461	-	transcript1568.chr18.nic@CCDC68	transcript1568.chr18.nic	protein_coding	54959183,54945388,54942675,54940997,54937957,54936833,54934820,54928800,54919271,54917913,54907786,54901563	54959461,54945477,54942803,54941083,54938097,54936958,54934948,54928882,54919376,54917996,54907862,54904415	Gene ID= ENSG00000166510.13 TPM= 2.63 Transcript Type= NA
chr18	55226784	55588232	55226784	55588232	-	ENST00000354452.7@TCF4	ENST00000354452.7	protein_coding	55588038,55587045,55585280,55464076,55461019,55403454,55350874,55350359,55279551,55275619,55269831,55261466,55259949,55257315,55254497,55234548,55232509,55228847,55228221,55226784	55588232,55587136,55585352,55464137,55461115,55403518,55351003,55350408,55279656,55275752,55269963,55261533,55260027,55257391,55254700,55234683,55232671,55229076,55228361,55228030	Gene ID= ENSG00000196628.15 TPM= 2.34 Transcript Type= protein_coding
chr18	55222334	55588629	55222334	55588629	-	ENST00000356073.8@TCF4	ENST00000356073.8	protein_coding	55588038,55587045,55585280,55464076,55461019,55403454,55350874,55350359,55279551,55275619,55269831,55261466,55259949,55257315,55254497,55234548,55232521,55228847,55228221,55222334	55588629,55587136,55585352,55464137,55461115,55403518,55351003,55350408,55279656,55275752,55269963,55261533,55260027,55257391,55254700,55234683,55232671,55229076,55228361,55228030	Gene ID= ENSG00000196628.15 TPM= 8.17 Transcript Type= protein_coding
chr18	55226793	55589807	55226793	55589807	-	ENST00000629387.2@TCF4	ENST00000629387.2	protein_coding	55589297,55587045,55585280,55464076,55461019,55403454,55350874,55350359,55279551,55275619,55269831,55261466,55259949,55257315,55254497,55234548,55232509,55228847,55228221,55226793	55589807,55587136,55585352,55464137,55461115,55403518,55351003,55350408,55279656,55275752,55269963,55261533,55260027,55257391,55254700,55234683,55232671,55229076,55228361,55228030	Gene ID= ENSG00000196628.15 TPM= 4.67 Transcript Type= protein_coding
chr18	55226646	55588625	55226646	55588625	-	ENST00000564999.5@TCF4	ENST00000564999.5	protein_coding	55588449,55587045,55585280,55464076,55461019,55403454,55350874,55350359,55279551,55275619,55269831,55261466,55259949,55257315,55254497,55234548,55232521,55228847,55228221,55226646	55588625,55587136,55585352,55464137,55461115,55403518,55351003,55350408,55279656,55275752,55269963,55261533,55260027,55257391,55254700,55234683,55232671,55229076,55228361,55228030	Gene ID= ENSG00000196628.15 TPM= 2.34 Transcript Type= protein_coding
chr18	55227690	55586105	55227690	55586105	-	ENST00000540999.5@TCF4	ENST00000540999.5	protein_coding	55585811,55585280,55464076,55461019,55403454,55350874,55350359,55279551,55275619,55269831,55261466,55259949,55257315,55254497,55234548,55232521,55228847,55228221,55227690	55586105,55585352,55464137,55461115,55403518,55351003,55350408,55279656,55275752,55269963,55261533,55260027,55257391,55254700,55234683,55232671,55229076,55228361,55228030	Gene ID= ENSG00000196628.15 TPM= 2.34 Transcript Type= protein_coding
chr18	55227841	55588230	55227841	55588230	-	transcript1595.chr18.nic@TCF4	transcript1595.chr18.nic	protein_coding	55588038,55585280,55464076,55461019,55403454,55350874,55350359,55279551,55275619,55269831,55261466,55259949,55257315,55254497,55234548,55232509,55228847,55228221,55227841	55588230,55585352,55464137,55461115,55403518,55351003,55350408,55279656,55275752,55269963,55261533,55260027,55257391,55254700,55234683,55232671,55229076,55228361,55228030	Gene ID= ENSG00000196628.15 TPM= 3.89 Transcript Type= NA
chr18	55227689	55510772	55227689	55510772	-	ENST00000543082.5@TCF4	ENST00000543082.5	protein_coding	55510579,55464076,55461019,55403454,55350874,55350359,55279551,55275619,55269831,55261466,55259949,55257315,55254497,55234548,55232521,55228847,55228221,55227689	55510772,55464137,55461115,55403518,55351003,55350408,55279656,55275752,55269963,55261533,55260027,55257391,55254700,55234683,55232671,55229076,55228361,55228030	Gene ID= ENSG00000196628.15 TPM= 1.17 Transcript Type= protein_coding
chr18	55222335	55321640	55222335	55321640	-	ENST00000637169.2@TCF4	ENST00000637169.2	protein_coding	55321255,55279551,55275619,55269831,55261466,55259949,55257315,55254497,55234548,55232509,55228847,55228221,55222335	55321640,55279656,55275752,55269963,55261533,55260027,55257391,55254700,55234683,55232671,55229076,55228361,55228030	Gene ID= ENSG00000196628.15 TPM= 2.34 Transcript Type= protein_coding
chr18	56602824	56651274	56602824	56651274	-	ENST00000587807.5@TXNL1	ENST00000587807.5	protein_coding	56651017,56638343,56626361,56626162,56624288,56618004,56616245,56614424,56610993,56602824	56651274,56639039,56626457,56626266,56624461,56618126,56616314,56614596,56611097,56603056	Gene ID= ENSG00000091164.12 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr18	56651361	57029811	56651361	57029811	+	ENST00000357574.7@WDR7	ENST00000357574.7	protein_coding	56651361,56672497,56679332,56681313,56682679,56685956,56686855,56691216,56691715,56694619,56694950,56696242,56717964,56731383,56756583,56758865,56779431,56781533,56816031,56879944,56923922,56935788,56938533,56939311,56962430,57020745,57027004	56651576,56672674,56679438,56681391,56682853,56686032,56686974,56691361,56691817,56694760,56695198,56696462,56718159,56731597,56757352,56758953,56779549,56781656,56816144,56880165,56924108,56935905,56938682,56939393,56962529,57020849,57029811	Gene ID= ENSG00000091157.13 TPM= 4.67 Transcript Type= protein_coding
chr18	56651676	57029805	56651676	57029805	+	transcript1629.chr18.nic@WDR7	transcript1629.chr18.nic	protein_coding	56651676,56672497,56679332,56681313,56682679,56685956,56686855,56691216,56691715,56694619,56694950,56696242,56717964,56731383,56756583,56758865,56779431,56781533,56816031,56879944,56923922,56935788,56938533,56939311,56962430,57020745,57027004	56651798,56672674,56679438,56681391,56682853,56686032,56686974,56691361,56691817,56694760,56695198,56696462,56718159,56731597,56757352,56758953,56779549,56781656,56816144,56880165,56924108,56935905,56938682,56939393,56962529,57020849,57029805	Gene ID= ENSG00000091157.13 TPM= 9.34 Transcript Type= NA
chr18	57548283	57586772	57548283	57586772	-	ENST00000262093.9@FECH	ENST00000262093.9	protein_coding	57586554,57580073,57573246,57571392,57566447,57562874,57559145,57554845,57554260,57551315,57548283	57586772,57580199,57573365,57571540,57566581,57562980,57559243,57554952,57554424,57551374,57550846	Gene ID= ENSG00000066926.10 TPM= 5.84 Transcript Type= protein_coding
chr18	57549510	57586654	57549510	57586654	-	ENST00000382873.7@FECH	ENST00000382873.7	protein_coding	57586554,57580055,57573246,57571392,57566447,57562874,57559145,57554845,57554260,57551315,57549510	57586654,57580199,57573365,57571540,57566581,57562980,57559243,57554952,57554424,57551374,57550846	Gene ID= ENSG00000066926.10 TPM= 9.34 Transcript Type= protein_coding
chr18	57600656	57621800	57600656	57621800	-	transcript1649.chr18.nic@NARS	transcript1649.chr18.nic	protein_coding	57621708,57620569,57615817,57615641,57613602,57611637,57609357,57607444,57607134,57606616,57605857,57602355,57600656	57621800,57620651,57615975,57615730,57613680,57611707,57609443,57607665,57607333,57606751,57605970,57602943,57601783	Gene ID= ENSG00000134440.11 TPM= 7.01 Transcript Type= NA
chr18	57600656	57622173	57600656	57622173	-	ENST00000256854.9@NARS	ENST00000256854.9	protein_coding	57621708,57620569,57615817,57615641,57613602,57611637,57609357,57607444,57607134,57606616,57605857,57602812,57602355,57600656	57622173,57620651,57615975,57615730,57613680,57611707,57609443,57607665,57607333,57606751,57605970,57602943,57602486,57601783	Gene ID= ENSG00000134440.11 TPM= 162.3 Transcript Type= protein_coding
chr18	57630350	57669296	57630350	57669296	+	ENST00000592201.1@AC027097.1	ENST00000592201.1	antisense_RNA	57630350,57641559,57668006	57630518,57642052,57669296	Gene ID= ENSG00000267040.6 TPM= 1.17 Transcript Type= antisense_RNA
chr18	57648353	57803320	57648353	57803320	-	transcript1661.chr18.nnic@ATP8B1	transcript1661.chr18.nnic	protein_coding	57802998,57761825,57731627,57706490,57704555,57701215,57701039,57697795,57697618,57695450,57695171,57694582,57691807,57688299,57685072,57684036,57674834,57671468,57669318,57668429,57667092,57662483,57661174,57655194,57653992,57652484,57652034,57650367,57648353	57803320,57761939,57731829,57706587,57704668,57701313,57701100,57697867,57697688,57695532,57695329,57694670,57691997,57688507,57685115,57684192,57675022,57671580,57669482,57668540,57667167,57662615,57661462,57655417,57654075,57652729,57652172,57650497,57648712	Gene ID= ENSG00000081923.11 TPM= 3.5 Transcript Type= NA
chr18	57646426	57803374	57646426	57803374	-	transcript1663.chr18.nic@ATP8B1	transcript1663.chr18.nic	protein_coding	57802998,57731627,57706490,57704555,57701215,57701039,57697795,57697618,57695450,57695171,57694582,57691807,57688299,57685072,57684036,57674834,57671468,57669318,57668429,57667092,57662483,57661174,57655194,57653992,57652484,57652034,57650367,57646426	57803374,57731829,57706587,57704668,57701313,57701100,57697867,57697688,57695532,57695329,57694670,57691997,57688507,57685115,57684192,57675022,57671580,57669482,57668540,57667167,57662615,57661462,57655417,57654075,57652729,57652172,57650497,57648712	Gene ID= ENSG00000081923.11 TPM= 11.09 Transcript Type= NA
chr18	58044387	58045477	58044387	58045477	+	ENST00000617539.1@NEDD4L	ENST00000617539.1	protein_coding	58044387,58045072	58044708,58045477	Gene ID= ENSG00000049759.17 TPM= 7.01 Transcript Type= protein_coding
chr18	58044378	58396705	58044378	58396705	+	ENST00000400345.7@NEDD4L	ENST00000400345.7	protein_coding	58044378,58165788,58245427,58248899,58252001,58315982,58322425,58323232,58324996,58328995,58330738,58333818,58335478,58341038,58341678,58342906,58349537,58350991,58357194,58364268,58365999,58367746,58370397,58373174,58383246,58385526,58387439,58389085,58390646,58391487,58396167	58044708,58165861,58245508,58248937,58252054,58316032,58322486,58323334,58325162,58329127,58330914,58333892,58335537,58341169,58341797,58343103,58349614,58351045,58357252,58364333,58366228,58367867,58370467,58373269,58383319,58385586,58387498,58389192,58390742,58391559,58396705	Gene ID= ENSG00000049759.17 TPM= 9.34 Transcript Type= protein_coding
chr18	58221535	58396578	58221535	58396578	+	ENST00000431212.6@NEDD4L	ENST00000431212.6	protein_coding	58221535,58245427,58248899,58252001,58315982,58322425,58323232,58324996,58328995,58330738,58333818,58335478,58341038,58341678,58342906,58349537,58350991,58357194,58364268,58365999,58367746,58370397,58373174,58383246,58385526,58387439,58389085,58390646,58391487,58396167	58221757,58245508,58248937,58252054,58316032,58322486,58323334,58325162,58329127,58330914,58333892,58335537,58341169,58341797,58343103,58349614,58351045,58357252,58364333,58366228,58367867,58370467,58373269,58383319,58385586,58387498,58389192,58390742,58391559,58396578	Gene ID= ENSG00000049759.17 TPM= 10.51 Transcript Type= protein_coding
chr18	58056896	58059394	58056896	58059394	-	transcript1701.chr18.nnic@NA	transcript1701.chr18.nnic	NA	58056896	58059394	Gene ID= novel_gene_chr18_1702 TPM= 9.34 Transcript Type= NA
chr18	58196712	58198442	58196712	58198442	-	transcript1703.chr18.nnic@NA	transcript1703.chr18.nnic	NA	58196712	58198442	Gene ID= novel_gene_chr18_1704 TPM= 9.34 Transcript Type= NA
chr18	58671386	58754477	58671386	58754477	+	ENST00000348428.7@MALT1	ENST00000348428.7	protein_coding	58671386,58681170,58696366,58700441,58709378,58709976,58710921,58714083,58715935,58723048,58733397,58734307,58735202,58741865,58744338,58745666,58747405	58671852,58681336,58696487,58700591,58709556,58710072,58710953,58714109,58715967,58723251,58733574,58734381,58735329,58742014,58744495,58745791,58754477	Gene ID= ENSG00000172175.12 TPM= 8.17 Transcript Type= protein_coding
chr18	58671535	58702238	58671535	58702238	+	transcript1729.chr18.nic@MALT1	transcript1729.chr18.nic	protein_coding	58671535,58681170,58696366,58700441	58671852,58681336,58696487,58702238	Gene ID= ENSG00000172175.12 TPM= 2.34 Transcript Type= NA
chr18	58863613	58985944	58863613	58985944	+	ENST00000589288.5@ZNF532	ENST00000589288.5	protein_coding	58863613,58865470,58918271,58934433,58939445,58948067,58953518,58979055,58981470,58983972	58863686,58865579,58920633,58934614,58939621,58948229,58953799,58979167,58981617,58985944	Gene ID= ENSG00000074657.13 TPM= 14.01 Transcript Type= protein_coding
chr18	59139477	59158836	59139477	59158836	+	ENST00000587834.5@SEC11C	ENST00000587834.5	protein_coding	59139477,59149513,59152536,59155688,59157608,59158632	59140035,59149622,59152685,59155807,59157665,59158836	Gene ID= ENSG00000166562.8 TPM= 39.7 Transcript Type= protein_coding
chr18	59139899	59158832	59139899	59158832	+	ENST00000588875.2@SEC11C	ENST00000588875.2	protein_coding	59139899,59149513,59152536,59155688,59158632	59140035,59149622,59152685,59155807,59158832	Gene ID= ENSG00000166562.8 TPM= 1.17 Transcript Type= protein_coding
chr18	59139875	59158832	59139875	59158832	+	ENST00000299714.7@SEC11C	ENST00000299714.7	protein_coding	59139875,59149513,59152536,59155688,59157608,59158632	59140035,59149622,59152612,59155807,59157665,59158832	Gene ID= ENSG00000166562.8 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr18	59139866	59157311	59139866	59157311	+	ENST00000509791.7@SEC11C	ENST00000509791.7	protein_coding	59139866,59149513,59152536,59155688	59140035,59149622,59152685,59157311	Gene ID= ENSG00000166562.8 TPM= 3.5 Transcript Type= protein_coding
chr18	59150745	59153201	59150745	59153201	-	transcript1747.chr18.nnic@NA	transcript1747.chr18.nnic	NA	59150745	59153201	Gene ID= novel_gene_chr18_1748 TPM= 3.5 Transcript Type= NA
chr18	59327823	59359962	59327823	59359962	-	ENST00000251047.5@LMAN1	ENST00000251047.5	protein_coding	59359031,59355504,59355313,59354519,59353202,59349113,59347513,59345919,59338760,59338557,59333091,59331418,59327823	59359962,59355658,59355420,59354580,59353301,59349236,59347571,59346051,59338953,59338627,59333244,59331539,59331129	Gene ID= ENSG00000074695.5 TPM= 117.34 Transcript Type= protein_coding
chr18	59433892	59697730	59433892	59697730	-	transcript1755.chr18.nnic@CCBE1	transcript1755.chr18.nnic	protein_coding	59697577,59697212,59696629,59480186,59469473,59466739,59454851,59447983,59439677,59439543,59438111,59433892	59697730,59697469,59696709,59480238,59469607,59466891,59454951,59448103,59439816,59439578,59438146,59436141	Gene ID= ENSG00000183287.13 TPM= 31.53 Transcript Type= NA
chr18	59698648	59701379	59698648	59701379	-	transcript1760.chr18.nnic@NA	transcript1760.chr18.nnic	NA	59698648	59701379	Gene ID= novel_gene_chr18_1761 TPM= 5.84 Transcript Type= NA
chr18	59899948	59904306	59899948	59904306	+	ENST00000316660.6@PMAIP1	ENST00000316660.6	protein_coding	59899948,59902647	59900235,59904306	Gene ID= ENSG00000141682.11 TPM= 7.01 Transcript Type= protein_coding
chr18	61606068	61606916	61606068	61606916	-	ENST00000586949.1@AC090409.1	ENST00000586949.1	lincRNA	61606851,61606068	61606916,61606654	Gene ID= ENSG00000267279.1 TPM= 3.5 Transcript Type= lincRNA
chr18	62041164	62187044	62041164	62187044	-	ENST00000640252.1@PIGN	ENST00000640252.1	protein_coding	62186844,62163531,62162253,62161133,62157687,62157129,62154545,62148214,62146971,62145909,62143306,62140420,62138983,62138243,62114561,62113134,62109834,62106986,62106789,62105543,62102794,62101075,62095848,62090476,62088756,62085209,62084531,62082673,62074779,62072673,62041164	62187044,62163656,62162329,62161385,62157808,62157227,62154651,62148338,62147101,62146025,62143346,62140479,62139075,62138298,62114639,62113316,62109973,62107085,62106881,62105634,62102902,62101183,62095950,62090578,62088842,62085264,62084606,62082746,62074821,62072725,62045979	Gene ID= ENSG00000197563.10 TPM= 2.34 Transcript Type= protein_coding
chr18	62044549	62187038	62044549	62187038	-	ENST00000400334.7@PIGN	ENST00000400334.7	protein_coding	62186844,62163531,62161133,62157687,62157129,62154545,62148214,62146971,62145909,62143306,62140420,62138983,62138243,62114561,62113134,62109834,62106986,62106789,62105543,62102794,62101075,62095848,62090476,62088756,62085209,62084531,62082673,62074779,62072673,62044549	62187038,62163656,62161385,62157808,62157227,62154651,62148338,62147101,62146025,62143346,62140479,62139075,62138298,62114639,62113316,62109973,62107085,62106881,62105634,62102902,62101183,62095950,62090578,62088842,62085264,62084606,62082746,62074821,62072725,62045979	Gene ID= ENSG00000197563.10 TPM= 2.34 Transcript Type= protein_coding
chr18	62044634	62187079	62044634	62187079	-	ENST00000638936.1@PIGN	ENST00000638936.1	protein_coding	62187023,62163531,62161133,62157687,62157129,62154545,62148214,62146971,62145909,62143306,62140420,62138983,62138243,62114561,62113134,62109834,62106986,62106789,62105543,62102794,62101075,62095848,62090476,62088756,62085209,62084531,62082673,62074779,62072673,62044634	62187079,62163656,62161385,62157808,62157227,62154651,62148338,62147101,62146025,62143346,62140479,62139075,62138298,62114639,62113316,62109973,62107085,62106881,62105634,62102902,62101183,62095950,62090578,62088842,62085264,62084606,62082746,62074821,62072725,62045979	Gene ID= ENSG00000197563.10 TPM= 1.17 Transcript Type= protein_coding
chr18	62042852	62187056	62042852	62187056	-	ENST00000640876.1@PIGN	ENST00000640876.1	protein_coding	62186844,62161133,62157687,62157129,62154545,62148214,62146971,62145909,62143306,62140420,62138983,62138243,62114561,62113134,62109834,62106986,62106789,62105543,62102794,62101075,62095848,62090476,62088756,62085209,62084531,62082673,62074779,62072673,62042852	62187056,62161385,62157808,62157227,62154651,62148338,62147101,62146025,62143346,62140479,62139075,62138298,62114639,62113316,62109973,62107085,62106881,62105634,62102902,62101183,62095950,62090578,62088842,62085264,62084606,62082746,62074821,62072725,62045979	Gene ID= ENSG00000197563.10 TPM= 5.84 Transcript Type= protein_coding
chr18	62044236	62187056	62044236	62187056	-	ENST00000638977.1@PIGN	ENST00000638977.1	protein_coding	62186844,62161133,62157687,62157129,62154545,62148214,62146971,62145909,62143306,62138983,62138243,62114561,62113134,62109834,62106986,62106789,62105543,62102794,62101075,62095848,62090476,62088756,62085209,62084531,62082673,62074779,62072673,62044236	62187056,62161385,62157808,62157227,62154651,62148338,62147101,62146025,62143346,62139075,62138298,62114639,62113316,62109973,62107085,62106881,62105634,62102902,62101183,62095950,62090578,62088842,62085264,62084606,62082746,62074821,62072725,62045979	Gene ID= ENSG00000197563.10 TPM= 2.34 Transcript Type= protein_coding
chr18	62112565	62187049	62112565	62187049	-	ENST00000638329.1@PIGN	ENST00000638329.1	protein_coding	62186844,62163531,62161133,62157687,62157129,62154545,62148214,62146971,62145909,62143306,62140420,62138983,62138243,62114561,62112565	62187049,62163656,62161385,62157808,62157227,62154651,62148338,62147101,62146025,62143346,62140479,62139075,62138298,62114639,62113316	Gene ID= ENSG00000197563.10 TPM= 1.17 Transcript Type= protein_coding
chr18	62044242	62186998	62044242	62186998	-	ENST00000638167.1@PIGN	ENST00000638167.1	protein_coding	62186844,62161133,62157687,62157129,62154545,62148214,62146971,62145909,62143306,62140420,62138983,62138243,62106986,62106789,62105543,62102794,62101075,62095848,62090476,62088756,62085209,62084531,62082673,62074779,62072673,62044242	62186998,62161385,62157808,62157227,62154651,62148338,62147101,62146025,62143346,62140479,62139075,62138298,62107085,62106881,62105634,62102902,62101183,62095950,62090578,62088842,62085264,62084606,62082746,62074821,62072725,62045979	Gene ID= ENSG00000197563.10 TPM= 1.17 Transcript Type= protein_coding
chr18	62187264	62307112	62187264	62307112	+	transcript1804.chr18.nic@KIAA1468	transcript1804.chr18.nic	protein_coding	62187264,62211153,62221037,62221219,62221384,62227289,62227598,62228305,62231194,62232332,62244764,62252664,62255407,62257948,62258512,62261511,62263989,62264729,62266701,62268869,62273980,62275374,62279774,62280646,62282306,62287351,62291543,62298790,62305414	62188031,62211242,62221108,62221274,62221497,62227492,62227689,62228598,62231269,62232427,62244876,62252754,62255478,62258088,62258676,62261658,62264145,62264852,62266749,62268948,62274086,62275473,62279856,62280709,62282444,62287467,62291631,62298860,62307112	Gene ID= ENSG00000134444.13 TPM= 4.67 Transcript Type= NA
chr18	62187291	62275571	62187291	62275571	+	ENST00000587725.5@KIAA1468	ENST00000587725.5	protein_coding	62187291,62211153,62221037,62221219,62221384,62227289,62227598,62228305,62231194,62232332,62244764,62252664,62255407,62257948,62258512,62261511,62263989,62264729,62266701,62268881,62273980,62275374	62188031,62211242,62221108,62221274,62221497,62227492,62227689,62228598,62231269,62232427,62244876,62252754,62255478,62258088,62258676,62261658,62264145,62264852,62266749,62268948,62274086,62275571	Gene ID= ENSG00000134444.13 TPM= 1.17 Transcript Type= non_stop_decay
chr18	62523007	62578583	62523007	62578583	+	ENST00000269499.9@ZCCHC2	ENST00000269499.9	protein_coding	62523007,62539681,62542498,62544802,62550348,62556203,62558687,62560587,62563009,62564571,62565002,62570103,62574057,62576512	62524363,62539792,62542574,62544873,62550460,62556297,62558770,62560644,62563144,62564635,62565096,62570231,62575550,62578583	Gene ID= ENSG00000141664.9 TPM= 8.17 Transcript Type= protein_coding
chr18	62523069	62576040	62523069	62576040	+	transcript1819.chr18.nic@ZCCHC2	transcript1819.chr18.nic	protein_coding	62523069,62539681,62542498,62544802,62550348,62556203,62558687,62560587,62563009,62564571,62565002,62570103,62574057	62524363,62539792,62542574,62544873,62550460,62556297,62558770,62560644,62563144,62564635,62565096,62570231,62576040	Gene ID= ENSG00000141664.9 TPM= 4.67 Transcript Type= NA
chr18	62715450	62980433	62715450	62980433	+	ENST00000262719.9@PHLPP1	ENST00000262719.9	protein_coding	62715450,62830035,62838784,62860435,62895011,62895781,62902964,62905224,62914913,62919959,62941718,62945109,62958629,62963368,62972514,62975397,62978262	62717259,62830231,62838909,62860601,62895157,62896011,62903166,62905284,62915008,62920114,62941918,62945271,62958759,62963472,62972708,62975625,62980433	Gene ID= ENSG00000081913.13 TPM= 12.84 Transcript Type= protein_coding
chr18	63330810	63367213	63330810	63367213	-	transcript1836.chr18.nic@KDSR	transcript1836.chr18.nic	protein_coding	63367011,63362779,63359736,63355498,63355204,63350888,63344410,63338800,63330810	63367213,63362868,63359792,63355563,63355299,63351079,63344493,63338883,63331901	Gene ID= ENSG00000119537.15 TPM= 7.01 Transcript Type= NA
chr18	63327726	63367510	63327726	63367510	-	ENST00000406396.7@KDSR	ENST00000406396.7	protein_coding	63367011,63362779,63359736,63355498,63355204,63350888,63344410,63338800,63335257,63327726	63367510,63362868,63359792,63355563,63355299,63351079,63344493,63338883,63335358,63331901	Gene ID= ENSG00000119537.15 TPM= 10.51 Transcript Type= protein_coding
chr18	63389190	63422463	63389190	63422463	-	ENST00000238497.9@VPS4B	ENST00000238497.9	protein_coding	63422233,63411467,63410290,63407432,63403707,63400547,63400048,63399242,63397034,63393409,63389190	63422463,63411578,63410446,63407499,63403826,63400703,63400196,63399323,63397253,63393549,63391076	Gene ID= ENSG00000119541.9 TPM= 40.87 Transcript Type= protein_coding
chr18	63969925	63989374	63969925	63989374	+	ENST00000397985.6@SERPINB8	ENST00000397985.6	protein_coding	63969925,63978299,63979801,63981721,63983579,63985093,63986874	63970170,63978476,63979938,63981838,63983721,63985245,63989374	Gene ID= ENSG00000166401.14 TPM= 2.34 Transcript Type= protein_coding
chr18	63970029	63989371	63970029	63989371	+	ENST00000353706.6@SERPINB8	ENST00000353706.6	protein_coding	63970029,63978299,63979801,63981721,63983579,63985093,63986874	63970187,63978476,63979938,63981838,63983721,63985245,63989371	Gene ID= ENSG00000166401.14 TPM= 1.17 Transcript Type= protein_coding
chr18	63983050	63987395	63983050	63987395	+	transcript1849.chr18.nnic@NA	transcript1849.chr18.nnic	NA	63983050	63987395	Gene ID= novel_gene_chr18_1850 TPM= 2.34 Transcript Type= NA
chr18	66501083	66604134	66501083	66604134	-	ENST00000262150.6@CDH19	ENST00000262150.6	protein_coding	66603954,66572010,66568416,66554405,66551094,66544719,66543971,66534986,66529845,66511568,66508995,66501083	66604134,66572316,66568710,66554524,66551258,66544903,66544224,66535107,66529966,66511685,66509246,66505302	Gene ID= ENSG00000071991.8 TPM= 2.34 Transcript Type= protein_coding
chr18	67506582	67516980	67506582	67516980	-	ENST00000310045.7@DSEL	ENST00000310045.7	protein_coding	67516361,67506582	67516980,67515492	Gene ID= ENSG00000171451.13 TPM= 7.01 Transcript Type= protein_coding
chr18	68673688	68715298	68673688	68715298	-	ENST00000299608.6@TMX3	ENST00000299608.6	protein_coding	68714936,68713846,68711364,68710021,68701745,68700405,68697932,68697226,68691295,68687667,68684428,68684190,68682925,68680981,68679463,68673688	68715298,68713900,68711403,68710144,68701790,68700485,68698031,68697303,68691361,68687765,68684485,68684243,68682981,68681110,68679531,68677193	Gene ID= ENSG00000166479.9 TPM= 99.25 Transcript Type= protein_coding
chr18	68707195	68715075	68707195	68715075	-	transcript1873.chr18.nic@TMX3	transcript1873.chr18.nic	protein_coding	68714936,68713846,68711364,68707195	68715075,68713900,68711403,68710144	Gene ID= ENSG00000166479.9 TPM= 3.5 Transcript Type= NA
chr18	68715204	69055189	68715204	69055189	+	transcript1875.chr18.nnic@CCDC102B	transcript1875.chr18.nnic	protein_coding	68715204,68734734,68798082,68836749,68838706,68846313,68874669,68897219,69010934,69054030	68715356,68734766,68798181,68837369,68838926,68846421,68874785,68897428,69011104,69055189	Gene ID= ENSG00000150636.17 TPM= 2.34 Transcript Type= NA
chr18	68798080	69055189	68798080	69055189	+	ENST00000360242.9@CCDC102B	ENST00000360242.9	protein_coding	68798080,68836749,68838706,68846313,68874669,68897219,69010934,69054030	68798181,68837369,68838926,68846421,68874785,68897428,69011104,69055189	Gene ID= ENSG00000150636.17 TPM= 8.17 Transcript Type= protein_coding
chr18	69400847	69760111	69400847	69760111	+	transcript1892.chr18.nic@DOK6	transcript1892.chr18.nic	protein_coding	69400847,69564487,69599384,69677734,69698404,69738965,69757756	69401310,69564594,69599498,69677853,69698593,69739103,69760111	Gene ID= ENSG00000206052.10 TPM= 3.5 Transcript Type= NA
chr18	69400844	69403538	69400844	69403538	+	transcript1893.chr18.nnic@DOK6	transcript1893.chr18.nnic	protein_coding	69400844,69402865	69401310,69403538	Gene ID= ENSG00000206052.10 TPM= 2.34 Transcript Type= NA
chr18	70170813	70174161	70170813	70174161	+	transcript1894.chr18.nnic@NA	transcript1894.chr18.nnic	NA	70170813	70174161	Gene ID= novel_gene_chr18_1895 TPM= 2.34 Transcript Type= NA
chr18	70288901	70330200	70288901	70330200	+	ENST00000397942.3@SOCS6	ENST00000397942.3	protein_coding	70288901,70324543	70289090,70330200	Gene ID= ENSG00000170677.5 TPM= 15.18 Transcript Type= protein_coding
chr18	70289045	70294102	70289045	70294102	+	transcript1901.chr18.nnic@NA	transcript1901.chr18.nnic	NA	70289045	70294102	Gene ID= novel_gene_chr18_1902 TPM= 2.34 Transcript Type= NA
chr18	70470152	70556804	70470152	70556804	+	transcript1904.chr18.nnic@AC091305.2	transcript1904.chr18.nnic	TEC	70470152,70490055,70531696,70553691	70470363,70490257,70531787,70556804	Gene ID= ENSG00000278971.1 TPM= 3.5 Transcript Type= NA
chr18	74148511	74160530	74148511	74160530	+	ENST00000169551.10@TIMM21	ENST00000169551.10	protein_coding	74148511,74155145,74155306,74158014,74158171,74158376	74149109,74155207,74155403,74158087,74158276,74160530	Gene ID= ENSG00000075336.11 TPM= 17.51 Transcript Type= protein_coding
chr18	74148513	74158786	74148513	74158786	+	transcript1917.chr18.nic@TIMM21	transcript1917.chr18.nic	protein_coding	74148513,74155145,74155306,74158014,74158171	74149109,74155207,74155403,74158087,74158786	Gene ID= ENSG00000075336.11 TPM= 5.84 Transcript Type= NA
chr18	74253296	74291989	74253296	74291989	-	transcript1928.chr18.nic@CYB5A	transcript1928.chr18.nic	protein_coding	74291747,74260915,74256830,74255741,74253296	74291989,74263477,74256853,74255775,74253665	Gene ID= ENSG00000166347.18 TPM= 22.18 Transcript Type= NA
chr18	74250847	74292016	74250847	74292016	-	ENST00000340533.8@CYB5A	ENST00000340533.8	protein_coding	74291747,74263349,74260915,74255741,74250847	74292016,74263477,74260944,74255775,74253665	Gene ID= ENSG00000166347.18 TPM= 4.67 Transcript Type= protein_coding
chr18	74253297	74291935	74253297	74291935	-	ENST00000494131.6@CYB5A	ENST00000494131.6	protein_coding	74291747,74263349,74260915,74256830,74255741,74253297	74291935,74263477,74260944,74256853,74255775,74253665	Gene ID= ENSG00000166347.18 TPM= 564.53 Transcript Type= protein_coding
chr18	74496208	74523454	74496208	74523454	+	ENST00000324262.8@CNDP2	ENST00000324262.8	protein_coding	74496208,74499882,74501329,74505849,74508840,74510813,74512448,74513559,74516228,74518499,74518949,74519999	74496431,74500033,74501472,74506011,74508928,74511013,74512532,74513719,74516392,74518640,74519096,74523454	Gene ID= ENSG00000133313.14 TPM= 222.59 Transcript Type= protein_coding
chr18	74496361	74521128	74496361	74521128	+	transcript1951.chr18.nic@CNDP2	transcript1951.chr18.nic	protein_coding	74496361,74497509,74501329,74505849,74508840,74510813,74512448,74513559,74516228,74518499,74518949,74519999	74496431,74500033,74501472,74506011,74508928,74511013,74512532,74513719,74516392,74518640,74519096,74521128	Gene ID= ENSG00000133313.14 TPM= 24.38 Transcript Type= NA
chr18	74496362	74498024	74496362	74498024	+	ENST00000580229.1@CNDP2	ENST00000580229.1	protein_coding	74496362,74497509	74496431,74498024	Gene ID= ENSG00000133313.14 TPM= 2.34 Transcript Type= processed_transcript
chr18	74496307	74521131	74496307	74521131	+	ENST00000579847.5@CNDP2	ENST00000579847.5	protein_coding	74496307,74499937,74501329,74505849,74508840,74510813,74512448,74513559,74516228,74518499,74518949,74519999	74496431,74500033,74501472,74506011,74508928,74511013,74512532,74513719,74516392,74518640,74519096,74521131	Gene ID= ENSG00000133313.14 TPM= 208 Transcript Type= protein_coding
chr18	74508845	74521121	74508845	74521121	+	ENST00000584581.5@CNDP2	ENST00000584581.5	protein_coding	74508845,74510813,74512448,74513559,74516228,74519999	74508928,74511013,74512532,74513719,74519096,74521121	Gene ID= ENSG00000133313.14 TPM= 2.34 Transcript Type= retained_intron
chr18	74591774	74597824	74591774	74597824	-	ENST00000580048.1@LINC00909	ENST00000580048.1	lincRNA	74596428,74591774	74597824,74593839	Gene ID= ENSG00000264247.1 TPM= 2.34 Transcript Type= lincRNA
chr18	74594675	74597617	74594675	74597617	-	transcript1973.chr18.nnic@NA	transcript1973.chr18.nnic	NA	74594675	74597617	Gene ID= novel_gene_chr18_1974 TPM= 2.34 Transcript Type= NA
chr18	74631020	75065669	74631020	75065669	+	ENST00000299687.9@ZNF407	ENST00000299687.9	protein_coding	74631020,74641008,74781428,74877197,74881036,74889918,74920514,75063150	74635706,74641122,74781502,74877363,74881119,74890038,74920692,75065669	Gene ID= ENSG00000215421.9 TPM= 4.67 Transcript Type= protein_coding
chr18	75071195	75074219	75071195	75074219	+	transcript1978.chr18.nnic@NA	transcript1978.chr18.nnic	NA	75071195	75074219	Gene ID= novel_gene_chr18_1979 TPM= 2.34 Transcript Type= NA
chr18	76340355	76495212	76340355	76495212	-	transcript1993.chr18.nnic@ZNF516	transcript1993.chr18.nnic	protein_coding	76495144,76441245,76378855,76371467,76370528,76340355	76495212,76443211,76380303,76371571,76370595,76340972	Gene ID= ENSG00000101493.10 TPM= 3.5 Transcript Type= NA
chr18	76486878	76489605	76486878	76489605	+	transcript2000.chr18.nnic@NA	transcript2000.chr18.nnic	NA	76486878	76489605	Gene ID= novel_gene_chr18_2001 TPM= 8.17 Transcript Type= NA
chr18	76824160	76970727	76824160	76970727	+	ENST00000543926.6@ZNF236	ENST00000543926.6	protein_coding	76824160,76849526,76851775,76868685,76871701,76875492,76878009,76880113,76881284,76895013,76899019,76904380,76905155,76908320,76910068,76910660,76912244,76913747,76915647,76919776,76923071,76925189,76927037,76927277,76927927,76935980,76937156,76947521,76955985,76959687,76960679,76968215	76824406,76849668,76851939,76868863,76871825,76875664,76878152,76880316,76881512,76895285,76899222,76904521,76905415,76908573,76910169,76910811,76912347,76913898,76915859,76920058,76923174,76925554,76927182,76927517,76928106,76936061,76937343,76947652,76956182,76959816,76960855,76970727	Gene ID= ENSG00000130856.15 TPM= 1.75 Transcript Type= nonsense_mediated_decay
chr18	76822557	76877518	76822557	76877518	+	transcript2008.chr18.nic@ZNF236	transcript2008.chr18.nic	protein_coding	76822557,76849526,76851775,76868685,76871701,76875492	76822662,76849668,76851939,76868863,76871825,76877518	Gene ID= ENSG00000130856.15 TPM= 2.34 Transcript Type= NA
chr18	76822607	76969918	76822607	76969918	+	ENST00000320610.13@ZNF236	ENST00000320610.13	protein_coding	76822607,76849526,76851775,76868685,76871701,76875492,76878009,76880113,76881284,76895013,76899019,76904380,76905155,76908320,76910068,76910660,76912244,76913747,76915647,76919776,76923071,76925189,76927037,76927277,76927927,76937156,76947521,76955985,76959687,76960679,76968215	76822662,76849668,76851939,76868863,76871825,76875664,76878152,76880316,76881512,76895285,76899222,76904521,76905415,76908573,76910169,76910811,76912347,76913898,76915859,76920058,76923174,76925554,76927182,76927517,76928106,76937343,76947652,76956182,76959816,76960855,76969918	Gene ID= ENSG00000130856.15 TPM= 2.92 Transcript Type= protein_coding
chr18	77012779	77132769	77012779	77132769	-	ENST00000397860.7@MBP	ENST00000397860.7	protein_coding	77132580,77105211,77066298,77012779	77132769,77105286,77066385,77017268	Gene ID= ENSG00000197971.14 TPM= 56.04 Transcript Type= protein_coding
chr18	77057826	77060029	77057826	77060029	-	transcript2026.chr18.nnic@NA	transcript2026.chr18.nnic	NA	77057826	77060029	Gene ID= novel_gene_chr18_2027 TPM= 2.34 Transcript Type= NA
chr18	79071401	79076247	79071401	79076247	-	transcript2055.chr18.nnic@NA	transcript2055.chr18.nnic	NA	79071401	79076247	Gene ID= novel_gene_chr18_2056 TPM= 3.5 Transcript Type= NA
chr18	79376698	79379517	79376698	79379517	-	transcript2057.chr18.nnic@NA	transcript2057.chr18.nnic	NA	79376698	79379517	Gene ID= novel_gene_chr18_2058 TPM= 3.5 Transcript Type= NA
chr18	79395930	79470014	79395930	79470014	+	ENST00000591814.5@NFATC1	ENST00000591814.5	protein_coding	79395930,79410403,79433579,79448782,79450954,79451676,79461311,79467450	79396351,79411501,79433738,79448984,79451126,79451816,79461366,79470014	Gene ID= ENSG00000131196.17 TPM= 5.06 Transcript Type= protein_coding
chr18	79400322	79529323	79400322	79529323	+	ENST00000318065.9@NFATC1	ENST00000318065.9	protein_coding	79400322,79410403,79433579,79448782,79450954,79451676,79461311,79467450,79486248,79527528	79400479,79411501,79433738,79448984,79451126,79451816,79461366,79467582,79486630,79529323	Gene ID= ENSG00000131196.17 TPM= 17.9 Transcript Type= protein_coding
chr18	79400333	79468001	79400333	79468001	+	ENST00000592223.5@NFATC1	ENST00000592223.5	protein_coding	79400333,79410403,79433579,79448782,79450954,79451676,79461311,79467450	79400479,79411501,79433738,79448984,79451126,79451816,79461366,79468001	Gene ID= ENSG00000131196.17 TPM= 9.73 Transcript Type= protein_coding
chr18	79677287	79679358	79677287	79679358	-	ENST00000616428.1@AC068473.5	ENST00000616428.1	lincRNA	79677287	79679358	Gene ID= ENSG00000274828.1 TPM= 9.34 Transcript Type= lincRNA
chr18	79679793	79754503	79679793	79754503	+	transcript2074.chr18.nnic@CTDP1	transcript2074.chr18.nnic	protein_coding	79679793,79695225,79695977,79697860,79704767,79710346,79712972,79714491,79717535,79717810,79753652	79680261,79695308,79696070,79697988,79704917,79710436,79713138,79715528,79717676,79718016,79754503	Gene ID= ENSG00000060069.16 TPM= 2.34 Transcript Type= NA
chr18	79679846	79754503	79679846	79754503	+	ENST00000075430.11@CTDP1	ENST00000075430.11	protein_coding	79679846,79695225,79695977,79697860,79704767,79710346,79712972,79714491,79717535,79717810,79736355,79753652	79680261,79695308,79696070,79697988,79704917,79710436,79713138,79715528,79717676,79718016,79736521,79754503	Gene ID= ENSG00000060069.16 TPM= 12.84 Transcript Type= protein_coding
chr18	79735610	79754501	79735610	79754501	+	ENST00000590599.1@CTDP1	ENST00000590599.1	protein_coding	79735610,79753652	79736521,79754501	Gene ID= ENSG00000060069.16 TPM= 4.67 Transcript Type= retained_intron
chr18	79900554	79902952	79900554	79902952	-	transcript2127.chr18.nnic@NA	transcript2127.chr18.nnic	NA	79900554	79902952	Gene ID= novel_gene_chr18_2128 TPM= 2.34 Transcript Type= NA
chr18	79902420	79951653	79902420	79951653	-	transcript2112.chr18.nic@PQLC1	transcript2112.chr18.nic	protein_coding	79950724,79943329,79919184,79902420	79951653,79943462,79919400,79904183	Gene ID= ENSG00000122490.18 TPM= 8.44 Transcript Type= NA
chr18	79902420	79951638	79902420	79951638	-	ENST00000357575.8@PQLC1	ENST00000357575.8	protein_coding	79951581,79950724,79943329,79919184,79902420	79951638,79951025,79943462,79919400,79904183	Gene ID= ENSG00000122490.18 TPM= 49.31 Transcript Type= protein_coding
chr18	79902420	79951664	79902420	79951664	-	ENST00000397778.6@PQLC1	ENST00000397778.6	protein_coding	79951581,79950724,79943329,79933969,79919184,79902420	79951664,79951025,79943462,79934022,79919400,79904183	Gene ID= ENSG00000122490.18 TPM= 98.35 Transcript Type= protein_coding
chr18	79902515	79951657	79902515	79951657	-	ENST00000474967.5@PQLC1	ENST00000474967.5	protein_coding	79951581,79950724,79949519,79943329,79902515	79951657,79951025,79949655,79943462,79904183	Gene ID= ENSG00000122490.18 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr18	79964635	79970805	79964635	79970805	+	transcript2137.chr18.nic@HSBP1L1	transcript2137.chr18.nic	protein_coding	79964635,79966612,79970440	79964786,79968183,79970805	Gene ID= ENSG00000226742.3 TPM= 7.01 Transcript Type= NA
chr18	79964561	79970822	79964561	79970822	+	ENST00000451882.2@HSBP1L1	ENST00000451882.2	protein_coding	79964561,79966612,79968089,79970440	79964786,79966678,79968183,79970822	Gene ID= ENSG00000226742.3 TPM= 18.68 Transcript Type= protein_coding
chr18	79973406	79988575	79973406	79988575	-	transcript2133.chr18.nic@TXNL4A	transcript2133.chr18.nic	protein_coding	79988240,79986602,79977598,79973406	79988575,79986750,79977701,79973856	Gene ID= ENSG00000141759.14 TPM= 2.34 Transcript Type= NA
chr18	79970811	79988593	79970811	79988593	-	ENST00000269601.9@TXNL4A	ENST00000269601.9	protein_coding	79988240,79977598,79970811	79988593,79977701,79973856	Gene ID= ENSG00000141759.14 TPM= 8.17 Transcript Type= protein_coding
chr18	80034358	80046392	80034358	80046392	+	ENST00000306735.9@RBFA	ENST00000306735.9	protein_coding	80034358,80036668,80037330,80038505,80042135,80044212,80045774	80034653,80036710,80037506,80038617,80042219,80044285,80046392	Gene ID= ENSG00000101546.12 TPM= 25.69 Transcript Type= protein_coding
chr18	80034466	80046397	80034466	80046397	+	ENST00000262197.7@RBFA	ENST00000262197.7	protein_coding	80034466,80036668,80037330,80038505,80044212,80045774	80034653,80036710,80037506,80038617,80044285,80046397	Gene ID= ENSG00000101546.12 TPM= 7.01 Transcript Type= protein_coding
chr18	80034459	80037030	80034459	80037030	+	transcript2152.chr18.nnic@NA	transcript2152.chr18.nnic	NA	80034459	80037030	Gene ID= novel_gene_chr18_2153 TPM= 2.34 Transcript Type= NA
chr18	80109031	80140351	80109031	80140351	+	ENST00000262198.8@ADNP2	ENST00000262198.8	protein_coding	80109031,80117530,80133103,80135612	80109472,80117650,80133192,80140351	Gene ID= ENSG00000101544.8 TPM= 31.53 Transcript Type= protein_coding
chr18	80182856	80247526	80182856	80247526	-	transcript2161.chr18.nic@PARD6G	transcript2161.chr18.nic	protein_coding	80247277,80202710,80201964,80182856	80247526,80202932,80202018,80183150	Gene ID= ENSG00000178184.15 TPM= 2.34 Transcript Type= NA
chr19	281040	291504	281040	291504	-	ENST00000434325.6@PLPP2	ENST00000434325.6	protein_coding	291285,288020,287474,282752,282134,281040	291504,288171,287751,282809,282310,281537	Gene ID= ENSG00000141934.9 TPM= 9.34 Transcript Type= protein_coding
chr19	405438	409170	405438	409170	-	ENST00000332235.7@C2CD4C	ENST00000332235.7	protein_coding	409006,405438	409170,408401	Gene ID= ENSG00000183186.7 TPM= 22.18 Transcript Type= protein_coding
chr19	416589	461096	416589	461096	-	transcript37.chr19.nic@SHC2	transcript37.chr19.nic	protein_coding	460529,440862,438970,438718,436380,436165,434709,430684,425097,422146,418923,416589	461096,440932,439030,438837,436683,436291,434865,430747,425231,422456,419056,417322	Gene ID= ENSG00000129946.10 TPM= 28.9 Transcript Type= NA
chr19	416589	461019	416589	461019	-	transcript38.chr19.nnic@SHC2	transcript38.chr19.nnic	protein_coding	460529,440862,438970,438718,436630,436380,436165,434709,430684,422146,418923,416589	461019,440932,439030,438837,436683,436431,436291,434865,430747,422456,419056,417322	Gene ID= ENSG00000129946.10 TPM= 7.88 Transcript Type= NA
chr19	416589	461096	416589	461096	-	transcript39.chr19.nnic@SHC2	transcript39.chr19.nnic	protein_coding	460529,440862,438970,438718,436380,436165,434709,430684,423598,422146,418923,416589	461096,440932,439030,438837,436683,436291,434865,430747,425231,423109,419056,417322	Gene ID= ENSG00000129946.10 TPM= 23.06 Transcript Type= NA
chr19	416583	460996	416583	460996	-	ENST00000264554.10@SHC2	ENST00000264554.10	protein_coding	460529,440862,438970,438718,436630,436380,436165,434709,430684,425097,422146,418923,416583	460996,440932,439030,438837,436683,436431,436291,434865,430747,425231,422456,419056,417322	Gene ID= ENSG00000129946.10 TPM= 55.75 Transcript Type= protein_coding
chr19	489169	490469	489169	490469	+	transcript49.chr19.nnic@NA	transcript49.chr19.nnic	NA	489169	490469	Gene ID= novel_gene_chr19_50 TPM= 3.5 Transcript Type= NA
chr19	507497	519654	507497	519654	+	ENST00000359315.6@TPGS1	ENST00000359315.6	protein_coding	507497,518889	507844,519654	Gene ID= ENSG00000141933.9 TPM= 78.23 Transcript Type= protein_coding
chr19	531674	542092	531674	542092	+	transcript55.chr19.nic@CDC34	transcript55.chr19.nic	protein_coding	531674,535837,536243,541339	532108,535923,537147,542092	Gene ID= ENSG00000099804.8 TPM= 11.68 Transcript Type= NA
chr19	538646	542086	538646	542086	+	transcript60.chr19.nnic@NA	transcript60.chr19.nnic	NA	538646	542086	Gene ID= novel_gene_chr19_61 TPM= 10.51 Transcript Type= NA
chr19	544035	549920	544035	549920	+	ENST00000264553.5@GZMM	ENST00000264553.5	protein_coding	544035,547280,548542,548922,549630	544126,547436,548677,549185,549920	Gene ID= ENSG00000197540.7 TPM= 3.5 Transcript Type= protein_coding
chr19	572578	583493	572578	583493	+	ENST00000353555.8@BSG	ENST00000353555.8	protein_coding	572578,579500,580379,580646,581315,582306,582514,582750	572701,579656,580461,580782,581591,582330,582582,583493	Gene ID= ENSG00000172270.18 TPM= 360.2 Transcript Type= protein_coding
chr19	572565	583490	572565	583490	+	ENST00000333511.7@BSG	ENST00000333511.7	protein_coding	572565,577774,579500,580379,580646,581315,582306,582514,582750	572701,578121,579656,580461,580782,581591,582330,582582,583490	Gene ID= ENSG00000172270.18 TPM= 42.62 Transcript Type= protein_coding
chr19	617224	633604	617224	633604	-	ENST00000588649.6@POLRMT	ENST00000588649.6	protein_coding	633425,632834,629540,625124,624719,623454,622821,622582,622149,621058,620365,619958,619586,619210,618997,618705,618488,617777,617570,617419,617224	633604,632938,630168,625254,624905,623603,622985,622752,622373,621846,620487,620080,619765,619296,619110,618760,618586,617849,617655,617480,617323	Gene ID= ENSG00000099821.13 TPM= 163.46 Transcript Type= protein_coding
chr19	617224	633563	617224	633563	-	transcript86.chr19.nic@POLRMT	transcript86.chr19.nic	protein_coding	633425,632834,629540,625124,624719,623454,622821,622582,622149,621058,620365,619958,619586,619210,618997,618705,618488,617570,617419,617224	633563,632938,630168,625254,624905,623603,622985,622752,622373,621846,620487,620080,619765,619296,619110,618760,618586,617849,617480,617323	Gene ID= ENSG00000099821.13 TPM= 5.84 Transcript Type= NA
chr19	647529	663198	647529	663198	-	transcript99.chr19.nnic@RNF126	transcript99.chr19.nnic	protein_coding	663047,652826,652233,651692,650234,649679,648882,648372,647529	663198,652884,652296,651855,650296,649748,649052,648487,648277	Gene ID= ENSG00000070423.17 TPM= 7.97 Transcript Type= NA
chr19	647529	663203	647529	663203	-	transcript103.chr19.nic@RNF126	transcript103.chr19.nic	protein_coding	663047,652826,652233,650234,649679,648882,648372,647529	663203,652884,652296,651855,649748,648975,648487,648277	Gene ID= ENSG00000070423.17 TPM= 2.72 Transcript Type= NA
chr19	647526	663277	647526	663277	-	ENST00000292363.9@RNF126	ENST00000292363.9	protein_coding	663047,652826,652233,651611,650234,649679,648882,648372,647526	663277,652884,652296,651855,650296,649748,648975,648487,648277	Gene ID= ENSG00000070423.17 TPM= 62.85 Transcript Type= protein_coding
chr19	676351	683385	676351	683385	+	transcript111.chr19.nnic@FSTL3	transcript111.chr19.nnic	protein_coding	676351,677792,680274,681333,681650,682288	676526,677977,680489,681560,682263,683385	Gene ID= ENSG00000070404.9 TPM= 47.17 Transcript Type= NA
chr19	676365	683399	676365	683399	+	ENST00000166139.8@FSTL3	ENST00000166139.8	protein_coding	676365,677792,680274,681333,681650	676526,677977,680489,681560,683399	Gene ID= ENSG00000070404.9 TPM= 89.2 Transcript Type= protein_coding
chr19	676351	683385	676351	683385	+	transcript122.chr19.nic@FSTL3	transcript122.chr19.nic	protein_coding	676351,677792,680274,681333	676526,677977,680489,683385	Gene ID= ENSG00000070404.9 TPM= 26.94 Transcript Type= NA
chr19	678500	683392	678500	683392	+	transcript128.chr19.nic@FSTL3	transcript128.chr19.nic	protein_coding	678500,681333,681650	680489,681560,683392	Gene ID= ENSG00000070404.9 TPM= 43.59 Transcript Type= NA
chr19	680707	683392	680707	683392	+	ENST00000592947.5@FSTL3	ENST00000592947.5	protein_coding	680707,681333,681650	680879,681560,683392	Gene ID= ENSG00000070404.9 TPM= 27.32 Transcript Type= protein_coding
chr19	685546	695498	685546	695498	-	ENST00000613411.4@PRSS57	ENST00000613411.4	protein_coding	695352,694814,691858,686925,685546	695498,694970,692002,687188,685922	Gene ID= ENSG00000185198.11 TPM= 1.17 Transcript Type= protein_coding
chr19	719274	748329	719274	748329	+	transcript136.chr19.nic@PALM	transcript136.chr19.nic	protein_coding	719274,726138,727008,727564,731095,734173,736019,740352,746285	719657,726189,727088,727694,731245,734194,736078,740483,748329	Gene ID= ENSG00000099864.17 TPM= 21.02 Transcript Type= NA
chr19	709101	748329	709101	748329	+	ENST00000338448.9@PALM	ENST00000338448.9	protein_coding	709101,726138,727008,727564,731095,734173,736019,740352,746285	709151,726189,727088,727694,731245,734194,736078,740483,748329	Gene ID= ENSG00000099864.17 TPM= 37.36 Transcript Type= protein_coding
chr19	741538	744412	741538	744412	+	transcript137.chr19.nnic@NA	transcript137.chr19.nnic	NA	741538	744412	Gene ID= novel_gene_chr19_138 TPM= 2.34 Transcript Type= NA
chr19	751126	764318	751126	764318	+	ENST00000215582.7@MISP	ENST00000215582.7	protein_coding	751126,756890,759909,761625,763501	751171,758726,760039,761663,764318	Gene ID= ENSG00000099812.8 TPM= 80.56 Transcript Type= protein_coding
chr19	797075	812327	797075	812327	+	ENST00000356948.10@PTBP1	ENST00000356948.10	protein_coding	797075,799413,803561,804036,804292,804532,804829,805013,805492,806408,807869,808360,808546,810543,810694	797505,799443,803636,804208,804438,804702,804939,805187,805569,806556,807902,808452,808762,810620,812327	Gene ID= ENSG00000011304.19 TPM= 141.14 Transcript Type= protein_coding
chr19	797425	812312	797425	812312	+	ENST00000349038.8@PTBP1	ENST00000349038.8	protein_coding	797425,799413,803561,804036,804292,804532,804829,805013,806408,807869,808360,808546,810543,810694	797505,799443,803636,804208,804438,804702,804939,805187,806556,807902,808452,808762,810620,812312	Gene ID= ENSG00000011304.19 TPM= 78.87 Transcript Type= protein_coding
chr19	827836	832018	827836	832018	+	ENST00000233997.3@AZU1	ENST00000233997.3	protein_coding	827836,828230,829562,830708,831716	827904,828386,829706,830941,832018	Gene ID= ENSG00000172232.9 TPM= 1.17 Transcript Type= protein_coding
chr19	859643	863630	859643	863630	+	ENST00000327726.10@CFD	ENST00000327726.10	protein_coding	859643,860617,860861,861699,863092	859744,860773,861005,861956,863630	Gene ID= ENSG00000197766.7 TPM= 86.4 Transcript Type= protein_coding
chr19	867964	893218	867964	893218	-	ENST00000325464.5@MED16	ENST00000325464.5	protein_coding	893086,890963,890137,889638,885770,884903,881559,879937,876974,875244,873449,871926,871037,868863,868416,867964	893218,891149,890244,889807,886201,885008,881714,880148,877180,875454,873582,872118,871253,868946,868499,868251	Gene ID= ENSG00000175221.14 TPM= 4.67 Transcript Type= protein_coding
chr19	867630	893218	867630	893218	-	ENST00000395808.7@MED16	ENST00000395808.7	protein_coding	893086,890963,890137,889638,885770,884903,881559,879937,876974,875244,873449,871926,871037,868863,867630	893218,891149,890244,889807,886201,885008,881714,880148,877180,875454,873582,872118,871253,868946,868499	Gene ID= ENSG00000175221.14 TPM= 3.5 Transcript Type= protein_coding
chr19	867963	872436	867963	872436	-	transcript199.chr19.nnic@MED16	transcript199.chr19.nnic	protein_coding	872398,871926,871037,868863,867963	872436,872118,871253,868946,868499	Gene ID= ENSG00000175221.14 TPM= 7.01 Transcript Type= NA
chr19	896502	898957	896502	898957	-	transcript205.chr19.nnic@NA	transcript205.chr19.nnic	NA	896502	898957	Gene ID= novel_gene_chr19_206 TPM= 19.85 Transcript Type= NA
chr19	896503	913225	896503	913225	-	transcript201.chr19.nic@R3HDM4	transcript201.chr19.nic	protein_coding	913087,902519,902242,901976,901422,900829,900061,899601,899440,896503	913225,902627,902434,902130,901546,900952,900146,899686,899495,897540	Gene ID= ENSG00000198858.9 TPM= 12.84 Transcript Type= NA
chr19	896503	913231	896503	913231	-	ENST00000361574.9@R3HDM4	ENST00000361574.9	protein_coding	913087,901976,901422,900829,900061,899601,899440,896503	913231,902130,901546,900952,900146,899686,899495,897540	Gene ID= ENSG00000198858.9 TPM= 44.37 Transcript Type= protein_coding
chr19	971978	972294	971978	972294	+	transcript281.chr19.nnic@NA	transcript281.chr19.nnic	NA	971978	972294	Gene ID= novel_gene_chr19_282 TPM= 3.5 Transcript Type= NA
chr19	974879	975605	974879	975605	+	transcript279.chr19.nnic@NA	transcript279.chr19.nnic	NA	974879	975605	Gene ID= novel_gene_chr19_280 TPM= 3.5 Transcript Type= NA
chr19	1009650	1021180	1009650	1021180	-	transcript213.chr19.nic@TMEM259	transcript213.chr19.nic	protein_coding	1020772,1014192,1013241,1012463,1012066,1011892,1011741,1011580,1011367,1011096,1009650	1021180,1014473,1013340,1012573,1012188,1011992,1011798,1011612,1011499,1011195,1010895	Gene ID= ENSG00000182087.12 TPM= 54.33 Transcript Type= NA
chr19	1009648	1021179	1009648	1021179	-	ENST00000356663.7@TMEM259	ENST00000356663.7	protein_coding	1020772,1014192,1013241,1012463,1012066,1011892,1011741,1011580,1011367,1011096,1009648	1021179,1014473,1013340,1012573,1012188,1011992,1011798,1011663,1011499,1011195,1010895	Gene ID= ENSG00000182087.12 TPM= 204.07 Transcript Type= protein_coding
chr19	1009650	1021180	1009650	1021180	-	transcript225.chr19.nic@TMEM259	transcript225.chr19.nic	protein_coding	1020772,1014192,1013241,1012066,1011892,1011741,1011580,1011367,1011096,1009650	1021180,1014473,1013340,1012573,1011992,1011798,1011612,1011499,1011195,1010895	Gene ID= ENSG00000182087.12 TPM= 30.39 Transcript Type= NA
chr19	1009650	1021180	1009650	1021180	-	transcript229.chr19.nic@TMEM259	transcript229.chr19.nic	protein_coding	1020772,1014192,1013241,1012066,1011892,1011741,1011580,1011367,1011096,1009650	1021180,1014473,1013340,1012573,1011992,1011798,1011663,1011499,1011195,1010895	Gene ID= ENSG00000182087.12 TPM= 76.22 Transcript Type= NA
chr19	1009650	1021180	1009650	1021180	-	transcript234.chr19.nic@TMEM259	transcript234.chr19.nic	protein_coding	1020772,1014192,1013241,1012463,1012066,1011892,1011741,1011580,1011096,1009650	1021180,1014473,1013340,1012573,1012188,1011992,1011798,1011663,1011499,1010895	Gene ID= ENSG00000182087.12 TPM= 42.62 Transcript Type= NA
chr19	1009653	1021127	1009653	1021127	-	transcript239.chr19.nic@TMEM259	transcript239.chr19.nic	protein_coding	1020772,1014192,1013241,1012066,1011892,1011741,1011580,1011367,1010991,1009653	1021127,1014473,1013340,1012573,1011992,1011798,1011663,1011499,1011095,1010895	Gene ID= ENSG00000182087.12 TPM= 30.25 Transcript Type= NA
chr19	1009650	1021180	1009650	1021180	-	transcript252.chr19.nic@TMEM259	transcript252.chr19.nic	protein_coding	1020772,1014192,1013241,1012066,1011892,1011741,1011580,1011096,1009650	1021180,1014473,1013340,1012573,1011992,1011798,1011663,1011499,1010895	Gene ID= ENSG00000182087.12 TPM= 49.62 Transcript Type= NA
chr19	1009650	1021180	1009650	1021180	-	transcript265.chr19.nic@TMEM259	transcript265.chr19.nic	protein_coding	1020772,1014192,1013241,1012066,1011892,1011580,1011096,1009650	1021180,1014473,1013340,1012573,1011992,1011798,1011499,1010895	Gene ID= ENSG00000182087.12 TPM= 27.44 Transcript Type= NA
chr19	1009651	1021115	1009651	1021115	-	ENST00000333175.9@TMEM259	ENST00000333175.9	protein_coding	1020772,1014192,1013241,1012463,1012066,1011892,1011741,1011580,1011367,1009651	1021115,1014473,1013340,1012573,1012188,1011992,1011798,1011663,1011499,1010895	Gene ID= ENSG00000182087.12 TPM= 4.81 Transcript Type= protein_coding
chr19	1026581	1039068	1026581	1039068	+	ENST00000263097.8@CNN2	ENST00000263097.8	protein_coding	1026581,1031071,1032392,1032559,1036130,1036416,1037625	1026724,1031192,1032458,1032696,1036246,1036562,1039068	Gene ID= ENSG00000064666.14 TPM= 241.11 Transcript Type= protein_coding
chr19	1026610	1039068	1026610	1039068	+	ENST00000348419.7@CNN2	ENST00000348419.7	protein_coding	1026610,1031071,1032392,1032559,1036416,1037625	1026724,1031192,1032458,1032696,1036562,1039068	Gene ID= ENSG00000064666.14 TPM= 25.1 Transcript Type= protein_coding
chr19	1026618	1039068	1026618	1039068	+	ENST00000565096.6@CNN2	ENST00000565096.6	protein_coding	1026618,1031071,1032392,1032559,1036130,1036416,1037625	1026724,1031192,1032458,1032663,1036246,1036562,1039068	Gene ID= ENSG00000064666.14 TPM= 26.27 Transcript Type= protein_coding
chr19	1064793	1065572	1064793	1065572	+	transcript336.chr19.nic@ABCA7	transcript336.chr19.nic	protein_coding	1064793,1065270	1065171,1065572	Gene ID= ENSG00000064687.12 TPM= 22.18 Transcript Type= NA
chr19	1040103	1065569	1040103	1065569	+	ENST00000263094.10@ABCA7	ENST00000263094.10	protein_coding	1040103,1041225,1041510,1041831,1042064,1042315,1042746,1043041,1043334,1043725,1044577,1045002,1046230,1046802,1047157,1047453,1048895,1049266,1050921,1051155,1051449,1051942,1052214,1053329,1053788,1054006,1054193,1054570,1054780,1055097,1055907,1056066,1056330,1056907,1057314,1057915,1058146,1058618,1058820,1059023,1061782,1062172,1063544,1063760,1064161,1064931,1065270	1040196,1041427,1041603,1041972,1042176,1042397,1042826,1043251,1043473,1043841,1044744,1045231,1046406,1047024,1047378,1047654,1049005,1049437,1051052,1051294,1051586,1052126,1052286,1053531,1053836,1054110,1054341,1054694,1054878,1055351,1055939,1056243,1056499,1057084,1057429,1058059,1058269,1058747,1058940,1059085,1061888,1062313,1063678,1063863,1064253,1065171,1065569	Gene ID= ENSG00000064687.12 TPM= 16.35 Transcript Type= protein_coding
chr19	1056934	1065569	1056934	1065569	+	ENST00000525073.6@ABCA7	ENST00000525073.6	protein_coding	1056934,1057314,1057969,1058146,1058618,1058820,1059023,1061782,1062172,1063544,1063760,1064161,1064931,1065270	1057084,1057429,1058059,1058269,1058747,1058940,1059085,1061888,1062313,1063678,1063863,1064253,1065171,1065569	Gene ID= ENSG00000064687.12 TPM= 7.01 Transcript Type= protein_coding
chr19	1067498	1086628	1067498	1086628	+	ENST00000586866.5@ARHGAP45	ENST00000586866.5	protein_coding	1067498,1068414,1073149,1073506,1073674,1073948,1074104,1074343,1074614,1074799,1077857,1079703,1079928,1080255,1080464,1080682,1080892,1081550,1081824,1082840,1083143,1084238,1085660	1067674,1068744,1073292,1073590,1073746,1074014,1074241,1074407,1074724,1074879,1078045,1079840,1080118,1080379,1080547,1080786,1081064,1081738,1081961,1083066,1083353,1084346,1086628	Gene ID= ENSG00000180448.10 TPM= 25.18 Transcript Type= protein_coding
chr19	1065923	1086628	1065923	1086628	+	ENST00000539243.6@ARHGAP45	ENST00000539243.6	protein_coding	1065923,1068414,1073149,1073506,1073674,1073948,1074104,1074343,1074614,1074799,1077857,1079703,1079928,1080255,1080464,1080682,1080892,1081550,1081824,1082840,1083143,1084238,1085660	1066163,1068744,1073292,1073590,1073746,1074014,1074241,1074407,1074724,1074879,1078045,1079840,1080118,1080379,1080547,1080786,1081064,1081738,1081961,1083066,1083353,1084346,1086628	Gene ID= ENSG00000180448.10 TPM= 46.2 Transcript Type= protein_coding
chr19	1067166	1086628	1067166	1086628	+	ENST00000313093.6@ARHGAP45	ENST00000313093.6	protein_coding	1067166,1068414,1073149,1073506,1073674,1073948,1074104,1074343,1074614,1074799,1077857,1079703,1079928,1080255,1080464,1080682,1080892,1081550,1081824,1082840,1083143,1084238,1085660	1067495,1068744,1073292,1073590,1073746,1074014,1074241,1074407,1074724,1074879,1078045,1079840,1080118,1080379,1080547,1080786,1081064,1081738,1081961,1083066,1083353,1084346,1086628	Gene ID= ENSG00000180448.10 TPM= 104.58 Transcript Type= protein_coding
chr19	1077487	1086628	1077487	1086628	+	ENST00000590577.2@ARHGAP45	ENST00000590577.2	protein_coding	1077487,1079703,1079928,1080255,1080464,1080682,1080892,1081550,1081824,1082840,1083143,1084238,1085660	1078045,1079840,1080118,1080379,1080547,1080786,1081064,1081738,1081961,1083066,1083353,1084346,1086628	Gene ID= ENSG00000180448.10 TPM= 21.1 Transcript Type= protein_coding
chr19	1069818	1071994	1069818	1071994	-	transcript339.chr19.nnic@NA	transcript339.chr19.nnic	NA	1069818	1071994	Gene ID= novel_gene_chr19_340 TPM= 21.02 Transcript Type= NA
chr19	1075238	1076401	1075238	1076401	-	transcript341.chr19.nnic@NA	transcript341.chr19.nnic	NA	1075238	1076401	Gene ID= novel_gene_chr19_342 TPM= 9.34 Transcript Type= NA
chr19	1086579	1095357	1086579	1095357	-	ENST00000615234.4@POLR2E	ENST00000615234.4	protein_coding	1095259,1093904,1091792,1090908,1090087,1089884,1089472,1086579	1095357,1094078,1091907,1090988,1090145,1089962,1089551,1088720	Gene ID= ENSG00000099817.11 TPM= 14.01 Transcript Type= protein_coding
chr19	1088163	1095374	1088163	1095374	-	ENST00000215587.11@POLR2E	ENST00000215587.11	protein_coding	1095259,1093904,1091792,1090908,1090087,1089884,1089472,1088163	1095374,1094078,1091907,1090988,1090145,1089962,1089573,1088720	Gene ID= ENSG00000099817.11 TPM= 260.37 Transcript Type= nonsense_mediated_decay
chr19	1103937	1106790	1103937	1106790	+	ENST00000354171.12@GPX4	ENST00000354171.12	protein_coding	1103937,1105186,1105366,1105658,1106242,1106400,1106540	1104127,1105280,1105510,1105809,1106266,1106459,1106790	Gene ID= ENSG00000167468.16 TPM= 65.29 Transcript Type= protein_coding
chr19	1104054	1106779	1104054	1106779	+	transcript365.chr19.nic@GPX4	transcript365.chr19.nic	protein_coding	1104054,1105186,1105366,1105658,1106242,1106400,1106540	1104929,1105280,1105510,1105809,1106266,1106459,1106779	Gene ID= ENSG00000167468.16 TPM= 34.93 Transcript Type= NA
chr19	1104052	1106779	1104052	1106779	+	ENST00000611653.4@GPX4	ENST00000611653.4	protein_coding	1104052,1105186,1105366,1105658,1106242,1106400,1106540	1104127,1105280,1105510,1105809,1106266,1106459,1106779	Gene ID= ENSG00000167468.16 TPM= 337.53 Transcript Type= protein_coding
chr19	1104650	1106787	1104650	1106787	+	ENST00000622390.4@GPX4	ENST00000622390.4	protein_coding	1104650,1105186,1105366,1105406,1105658,1106242,1106400,1106540	1104929,1105280,1105402,1105510,1105809,1106266,1106459,1106787	Gene ID= ENSG00000167468.16 TPM= 40.38 Transcript Type= protein_coding
chr19	1107641	1155164	1107641	1155164	-	transcript344.chr19.nic@SBNO2	transcript344.chr19.nic	protein_coding	1155086,1154184,1149369,1147309,1127604,1123942,1123534,1122894,1122658,1122468,1122139,1119906,1119516,1119011,1117323,1116829,1116021,1114231,1113535,1112818,1112402,1112189,1111996,1111506,1111019,1110745,1109683,1109506,1109292,1109135,1108779,1107641	1155164,1154402,1149442,1147420,1127765,1124022,1123639,1123045,1122791,1122558,1122282,1120023,1119621,1119164,1117499,1116926,1116103,1114422,1113704,1112949,1112537,1112301,1112067,1111614,1111093,1110888,1109777,1109598,1109423,1109211,1108969,1108704	Gene ID= ENSG00000064932.15 TPM= 29.77 Transcript Type= NA
chr19	1107636	1174283	1107636	1174283	-	ENST00000361757.7@SBNO2	ENST00000361757.7	protein_coding	1174172,1154184,1149369,1147309,1127604,1123942,1123534,1122894,1122658,1122468,1122139,1119906,1119516,1119011,1117323,1116829,1116021,1114231,1113535,1112818,1112402,1112189,1111996,1111506,1111019,1110745,1109683,1109506,1109292,1109135,1108779,1107636	1174283,1154402,1149442,1147420,1127765,1124022,1123639,1123045,1122791,1122558,1122282,1120023,1119621,1119164,1117499,1116926,1116103,1114422,1113704,1112949,1112537,1112301,1112067,1111614,1111093,1110888,1109777,1109598,1109423,1109211,1108969,1108704	Gene ID= ENSG00000064932.15 TPM= 60.13 Transcript Type= protein_coding
chr19	1107637	1132221	1107637	1132221	-	ENST00000438103.6@SBNO2	ENST00000438103.6	protein_coding	1132090,1127604,1123942,1123534,1122894,1122658,1122468,1122139,1119906,1119516,1119011,1117323,1116829,1116021,1114231,1113535,1112818,1112402,1112189,1111996,1111506,1111019,1110745,1109683,1109506,1109292,1109135,1108779,1107637	1132221,1127765,1124022,1123639,1123045,1122791,1122558,1122282,1120023,1119621,1119164,1117499,1116926,1116103,1114422,1113704,1112949,1112537,1112301,1112067,1111614,1111093,1110888,1109777,1109598,1109423,1109211,1108969,1108704	Gene ID= ENSG00000064932.15 TPM= 43.2 Transcript Type= protein_coding
chr19	1205706	1228095	1205706	1228095	+	transcript382.chr19.nic@STK11	transcript382.chr19.nic	protein_coding	1205706,1218417,1219324,1220373,1220581,1221213,1221949,1222985,1226454,1226603,1227593	1207203,1218500,1219413,1220505,1220717,1221340,1222006,1223172,1226600,1226663,1228095	Gene ID= ENSG00000118046.14 TPM= 113.86 Transcript Type= NA
chr19	1206464	1228435	1206464	1228435	+	ENST00000326873.11@STK11	ENST00000326873.11	protein_coding	1206464,1218417,1219324,1220373,1220581,1221213,1221949,1222985,1226454,1227593	1207203,1218500,1219413,1220505,1220717,1221340,1222006,1223172,1226663,1228435	Gene ID= ENSG00000118046.14 TPM= 27.15 Transcript Type= protein_coding
chr19	1225463	1228094	1225463	1228094	+	transcript412.chr19.nnic@NA	transcript412.chr19.nnic	NA	1225463	1228094	Gene ID= novel_gene_chr19_413 TPM= 2.34 Transcript Type= NA
chr19	1241750	1244826	1241750	1244826	+	ENST00000215375.6@ATP5D	ENST00000215375.6	protein_coding	1241750,1242456,1244097,1244315	1241991,1242609,1244185,1244826	Gene ID= ENSG00000099624.7 TPM= 65.97 Transcript Type= protein_coding
chr19	1241746	1244825	1241746	1244825	+	ENST00000395633.5@ATP5D	ENST00000395633.5	protein_coding	1241746,1242456,1244097,1244315,1244737	1241991,1242609,1244185,1244440,1244825	Gene ID= ENSG00000099624.7 TPM= 116.18 Transcript Type= protein_coding
chr19	1241820	1244786	1241820	1244786	+	ENST00000591660.5@ATP5D	ENST00000591660.5	protein_coding	1241820,1242456,1244097,1244315,1244691	1241991,1242609,1244185,1244440,1244786	Gene ID= ENSG00000099624.7 TPM= 1.17 Transcript Type= protein_coding
chr19	1244058	1244825	1244058	1244825	+	ENST00000614837.1@ATP5D	ENST00000614837.1	protein_coding	1244058,1244315,1244737	1244185,1244440,1244825	Gene ID= ENSG00000099624.7 TPM= 10.51 Transcript Type= retained_intron
chr19	1248553	1259140	1248553	1259140	+	ENST00000300952.6@MIDN	ENST00000300952.6	protein_coding	1248553,1249890,1251562,1251839,1254167,1254902,1255422,1256995	1248660,1250529,1251649,1251901,1254478,1255061,1255694,1259140	Gene ID= ENSG00000167470.12 TPM= 67.72 Transcript Type= protein_coding
chr19	1269326	1274810	1269326	1274810	+	transcript434.chr19.nic@CIRBP	transcript434.chr19.nic	protein_coding	1269326,1270928,1271140,1271329,1271551,1271981,1274307,1274649	1269410,1271036,1271246,1271467,1271632,1273715,1274440,1274810	Gene ID= ENSG00000099622.13 TPM= 49.54 Transcript Type= NA
chr19	1269264	1274810	1269264	1274810	+	transcript441.chr19.nic@CIRBP	transcript441.chr19.nic	protein_coding	1269264,1270928,1271140,1271329,1271551,1271981,1274649	1269410,1271036,1271246,1271467,1271632,1274440,1274810	Gene ID= ENSG00000099622.13 TPM= 85.54 Transcript Type= NA
chr19	1269331	1274807	1269331	1274807	+	transcript455.chr19.nic@CIRBP	transcript455.chr19.nic	protein_coding	1269331,1270928,1271329,1271551,1271981	1269410,1271036,1271467,1271632,1274807	Gene ID= ENSG00000099622.13 TPM= 13.43 Transcript Type= NA
chr19	1269337	1273172	1269337	1273172	+	ENST00000320936.9@CIRBP	ENST00000320936.9	protein_coding	1269337,1270928,1271140,1271329,1271551,1271981,1272427	1269410,1271036,1271246,1271467,1271632,1272051,1273172	Gene ID= ENSG00000099622.13 TPM= 147.7 Transcript Type= protein_coding
chr19	1269350	1274810	1269350	1274810	+	ENST00000589235.5@CIRBP	ENST00000589235.5	protein_coding	1269350,1270928,1271140,1271329,1271551,1271981,1274307	1269410,1271036,1271246,1271467,1271632,1272051,1274810	Gene ID= ENSG00000099622.13 TPM= 28.61 Transcript Type= protein_coding
chr19	1269352	1274773	1269352	1274773	+	ENST00000585914.5@CIRBP	ENST00000585914.5	protein_coding	1269352,1270928,1271140,1271329,1271551,1271981,1273494,1274307,1274649	1269410,1271036,1271246,1271467,1271632,1272051,1273715,1274444,1274773	Gene ID= ENSG00000099622.13 TPM= 4.67 Transcript Type= nonsense_mediated_decay
chr19	1276021	1279244	1276021	1279244	+	ENST00000469144.5@C19orf24	ENST00000469144.5	protein_coding	1276021,1277183,1278777	1276103,1277299,1279244	Gene ID= ENSG00000228300.13 TPM= 21.02 Transcript Type= protein_coding
chr19	1276093	1279244	1276093	1279244	+	ENST00000485191.5@C19orf24	ENST00000485191.5	protein_coding	1276093,1278777	1277299,1279244	Gene ID= ENSG00000228300.13 TPM= 1.17 Transcript Type= retained_intron
chr19	1354966	1378431	1354966	1378431	+	transcript463.chr19.nic@MUM1	transcript463.chr19.nic	protein_coding	1354966,1356324,1357009,1358394,1358588,1360136,1362250,1364509,1366305,1367160,1369265,1369596,1370642,1373072,1376519	1355020,1356449,1357094,1358464,1358700,1361032,1362351,1364579,1366381,1367220,1369340,1369646,1371078,1373160,1378431	Gene ID= ENSG00000160953.15 TPM= 9.18 Transcript Type= NA
chr19	1354968	1378431	1354968	1378431	+	transcript466.chr19.nic@MUM1	transcript466.chr19.nic	protein_coding	1354968,1356324,1357009,1358394,1358588,1360136,1362250,1364509,1366305,1367160,1369265,1369596,1370642,1373072,1376519	1355135,1356449,1357094,1358464,1358700,1361032,1362351,1364579,1366381,1367220,1369340,1369646,1371078,1373160,1378431	Gene ID= ENSG00000160953.15 TPM= 5.67 Transcript Type= NA
chr19	1354966	1378429	1354966	1378429	+	transcript470.chr19.nnic@MUM1	transcript470.chr19.nnic	protein_coding	1354966,1356324,1357009,1358394,1360136,1362250,1364509,1366305,1367160,1369265,1369596,1370642,1373072,1376145	1355020,1356449,1357094,1358464,1361032,1362351,1364579,1366381,1367220,1369340,1369646,1371078,1373160,1378429	Gene ID= ENSG00000160953.15 TPM= 8.39 Transcript Type= NA
chr19	1354966	1378431	1354966	1378431	+	transcript472.chr19.nic@MUM1	transcript472.chr19.nic	protein_coding	1354966,1356324,1357009,1358394,1360136,1362250,1364509,1366305,1367160,1369265,1369596,1370642,1373072,1376519	1355020,1356449,1357094,1358464,1361032,1362351,1364579,1366381,1367220,1369340,1369646,1371078,1373160,1378431	Gene ID= ENSG00000160953.15 TPM= 23.57 Transcript Type= NA
chr19	1354968	1378429	1354968	1378429	+	transcript474.chr19.nnic@MUM1	transcript474.chr19.nnic	protein_coding	1354968,1356324,1357009,1358394,1360136,1362250,1364509,1366305,1367160,1369265,1369596,1370642,1373072,1376145	1355135,1356449,1357094,1358464,1361032,1362351,1364579,1366381,1367220,1369340,1369646,1371078,1373160,1378429	Gene ID= ENSG00000160953.15 TPM= 6.84 Transcript Type= NA
chr19	1354968	1378431	1354968	1378431	+	transcript476.chr19.nic@MUM1	transcript476.chr19.nic	protein_coding	1354968,1356324,1357009,1358394,1360136,1362250,1364509,1366305,1367160,1369265,1369596,1370642,1373072,1376519	1355135,1356449,1357094,1358464,1361032,1362351,1364579,1366381,1367220,1369340,1369646,1371078,1373160,1378431	Gene ID= ENSG00000160953.15 TPM= 8.01 Transcript Type= NA
chr19	1354966	1376917	1354966	1376917	+	transcript480.chr19.nic@MUM1	transcript480.chr19.nic	protein_coding	1354966,1356324,1357009,1360136,1362250,1364509,1366305,1367160,1369265,1369596,1370642,1373072,1376519	1355020,1356449,1358464,1361032,1362351,1364579,1366381,1367220,1369340,1369646,1371078,1373160,1376917	Gene ID= ENSG00000160953.15 TPM= 5.84 Transcript Type= NA
chr19	1354966	1359894	1354966	1359894	+	transcript509.chr19.nic@MUM1	transcript509.chr19.nic	protein_coding	1354966,1356324,1357009,1358394,1358588	1355020,1356449,1357094,1358464,1359894	Gene ID= ENSG00000160953.15 TPM= 2.34 Transcript Type= NA
chr19	1354968	1359894	1354968	1359894	+	transcript510.chr19.nic@MUM1	transcript510.chr19.nic	protein_coding	1354968,1356324,1357009,1358394,1358588	1355135,1356449,1357094,1358464,1359894	Gene ID= ENSG00000160953.15 TPM= 2.34 Transcript Type= NA
chr19	1354922	1360631	1354922	1360631	+	ENST00000590695.2@MUM1	ENST00000590695.2	protein_coding	1354922,1356324,1357009,1358588,1360136	1355020,1356449,1358464,1358700,1360631	Gene ID= ENSG00000160953.15 TPM= 3.5 Transcript Type= retained_intron
chr19	1356314	1378431	1356314	1378431	+	ENST00000591806.5@MUM1	ENST00000591806.5	protein_coding	1356314,1357009,1358394,1360136,1362250,1364509,1366305,1367160,1369265,1369596,1370642,1373072,1376519	1356449,1357094,1358464,1361032,1362351,1364579,1366381,1367220,1369340,1369646,1371078,1373160,1378431	Gene ID= ENSG00000160953.15 TPM= 18.52 Transcript Type= protein_coding
chr19	1383631	1395589	1383631	1395589	+	ENST00000233627.13@NDUFS7	ENST00000233627.13	protein_coding	1383631,1387811,1388525,1388833,1390871,1391119,1393242,1395391	1383942,1387847,1388593,1388938,1391050,1391165,1393330,1395589	Gene ID= ENSG00000115286.19 TPM= 140.11 Transcript Type= protein_coding
chr19	1383900	1395589	1383900	1395589	+	ENST00000539480.5@NDUFS7	ENST00000539480.5	protein_coding	1383900,1387811,1388525,1388833,1390871,1391119,1393242,1394418	1383942,1387847,1388593,1388938,1391050,1391165,1393330,1395589	Gene ID= ENSG00000115286.19 TPM= 10.51 Transcript Type= protein_coding
chr19	1383904	1395581	1383904	1395581	+	ENST00000313408.11@NDUFS7	ENST00000313408.11	protein_coding	1383904,1387811,1388525,1388833,1390871,1391119,1393242	1383942,1387847,1388593,1388938,1391050,1391165,1395581	Gene ID= ENSG00000115286.19 TPM= 8.17 Transcript Type= protein_coding
chr19	1397026	1401553	1397026	1401553	-	ENST00000252288.7@GAMT	ENST00000252288.7	protein_coding	1401296,1399793,1399524,1399128,1398916,1397026	1401553,1399938,1399587,1399195,1399026,1397499	Gene ID= ENSG00000130005.12 TPM= 12.84 Transcript Type= protein_coding
chr19	1407529	1435684	1407529	1435684	+	transcript482.chr19.nnic@DAZAP1	transcript482.chr19.nnic	protein_coding	1407529,1417500,1418204,1418666,1421148,1422348,1425878,1428842,1429967,1430222,1432514,1434737,1435050	1407802,1417540,1418370,1418731,1421258,1422396,1425960,1428995,1429996,1430362,1432690,1434988,1435684	Gene ID= ENSG00000071626.16 TPM= 4.96 Transcript Type= NA
chr19	1407529	1435684	1407529	1435684	+	transcript492.chr19.nic@DAZAP1	transcript492.chr19.nic	protein_coding	1407529,1417500,1418204,1418666,1421148,1422348,1428842,1429967,1430222,1432514,1434737	1407802,1417540,1418370,1418731,1421258,1422396,1428995,1429996,1430362,1432690,1435684	Gene ID= ENSG00000071626.16 TPM= 8.47 Transcript Type= NA
chr19	1420194	1435684	1420194	1435684	+	transcript499.chr19.nnic@DAZAP1	transcript499.chr19.nnic	protein_coding	1420194,1421151,1422348,1428842,1429967,1430222,1432514,1434737	1420423,1421258,1422396,1428995,1429996,1430362,1432690,1435684	Gene ID= ENSG00000071626.16 TPM= 7.3 Transcript Type= NA
chr19	1424362	1435684	1424362	1435684	+	transcript506.chr19.nic@DAZAP1	transcript506.chr19.nic	protein_coding	1424362,1428842,1429967,1430222,1432514,1434737	1425960,1428995,1429996,1430362,1432690,1435684	Gene ID= ENSG00000071626.16 TPM= 4.29 Transcript Type= NA
chr19	1432043	1435684	1432043	1435684	+	ENST00000589874.2@DAZAP1	ENST00000589874.2	protein_coding	1432043	1435684	Gene ID= ENSG00000071626.16 TPM= 1.17 Transcript Type= retained_intron
chr19	1407569	1435684	1407569	1435684	+	ENST00000336761.10@DAZAP1	ENST00000336761.10	protein_coding	1407569,1417500,1418204,1418666,1421148,1422348,1425878,1428842,1429967,1430222,1432514,1433739,1434737	1407802,1417540,1418370,1418731,1421258,1422396,1425960,1428995,1429996,1430362,1432690,1433827,1435684	Gene ID= ENSG00000071626.16 TPM= 7.68 Transcript Type= protein_coding
chr19	1415396	1420174	1415396	1420174	-	transcript520.chr19.nnic@NA	transcript520.chr19.nnic	NA	1415396	1420174	Gene ID= novel_gene_chr19_521 TPM= 7.01 Transcript Type= NA
chr19	1438358	1440494	1438358	1440494	+	ENST00000233609.8@RPS15	ENST00000233609.8	protein_coding	1438358,1438811,1440019,1440349	1438428,1438892,1440253,1440494	Gene ID= ENSG00000115268.9 TPM= 518.18 Transcript Type= protein_coding
chr19	1438386	1440494	1438386	1440494	+	ENST00000592588.6@RPS15	ENST00000592588.6	protein_coding	1438386,1438807,1440019,1440349	1438428,1438892,1440253,1440494	Gene ID= ENSG00000115268.9 TPM= 518.18 Transcript Type= protein_coding
chr19	1438385	1440494	1438385	1440494	+	ENST00000586686.6@RPS15	ENST00000586686.6	protein_coding	1438385,1438807,1439968,1440349	1438428,1438892,1440253,1440494	Gene ID= ENSG00000115268.9 TPM= 2.1 Transcript Type= protein_coding
chr19	1438406	1440494	1438406	1440494	+	ENST00000591804.6@RPS15	ENST00000591804.6	protein_coding	1438406,1438807,1439606,1440019,1440349	1438428,1438892,1439826,1440253,1440494	Gene ID= ENSG00000115268.9 TPM= 2.1 Transcript Type= protein_coding
chr19	1438401	1440494	1438401	1440494	+	ENST00000592623.5@RPS15	ENST00000592623.5	protein_coding	1438401,1440019,1440349	1438892,1440253,1440494	Gene ID= ENSG00000115268.9 TPM= 2.1 Transcript Type= protein_coding
chr19	1473948	1479556	1473948	1479556	-	ENST00000585675.5@C19orf25	ENST00000585675.5	protein_coding	1479163,1478774,1473948	1479556,1478905,1475258	Gene ID= ENSG00000119559.15 TPM= 15.18 Transcript Type= protein_coding
chr19	1476995	1479229	1476995	1479229	-	transcript541.chr19.nic@C19orf25	transcript541.chr19.nic	protein_coding	1479163,1476995	1479229,1478905	Gene ID= ENSG00000119559.15 TPM= 3.5 Transcript Type= NA
chr19	1474174	1479183	1474174	1479183	-	ENST00000592872.5@C19orf25	ENST00000592872.5	protein_coding	1479114,1478774,1474174	1479183,1478905,1475258	Gene ID= ENSG00000119559.15 TPM= 2.92 Transcript Type= protein_coding
chr19	1474168	1479181	1474168	1479181	-	ENST00000586564.5@C19orf25	ENST00000586564.5	protein_coding	1479140,1478774,1474168	1479181,1478905,1475258	Gene ID= ENSG00000119559.15 TPM= 16.93 Transcript Type= protein_coding
chr19	1490747	1497927	1490747	1497927	+	ENST00000233596.7@REEP6	ENST00000233596.7	protein_coding	1490747,1495294,1495469,1496285,1497174	1491384,1495387,1495607,1496453,1497927	Gene ID= ENSG00000115255.10 TPM= 8.17 Transcript Type= protein_coding
chr19	1505018	1513019	1505018	1513019	-	transcript545.chr19.nic@ADAMTSL5	transcript545.chr19.nic	protein_coding	1512963,1511625,1510845,1510639,1510368,1510150,1508443,1507998,1507557,1507242,1506739,1506590,1505018	1513019,1511727,1510917,1510730,1510428,1510258,1508570,1508109,1507643,1507405,1506928,1506661,1506316	Gene ID= ENSG00000185761.10 TPM= 4.67 Transcript Type= NA
chr19	1554669	1568058	1554669	1568058	-	ENST00000402693.4@MEX3D	ENST00000402693.4	protein_coding	1567464,1554669	1568058,1556923	Gene ID= ENSG00000181588.16 TPM= 9.34 Transcript Type= protein_coding
chr19	1576640	1592899	1576640	1592899	-	transcript557.chr19.nic@MBD3	transcript557.chr19.nic	protein_coding	1592618,1585055,1584540,1582622,1581092,1576640	1592899,1585214,1584677,1582712,1581269,1578538	Gene ID= ENSG00000071655.17 TPM= 15.47 Transcript Type= NA
chr19	1573596	1592801	1573596	1592801	-	ENST00000156825.5@MBD3	ENST00000156825.5	protein_coding	1592618,1585055,1584540,1582622,1581092,1578335,1573596	1592801,1585214,1584677,1582712,1581269,1578538,1578158	Gene ID= ENSG00000071655.17 TPM= 9.34 Transcript Type= protein_coding
chr19	1576678	1592708	1576678	1592708	-	ENST00000434436.7@MBD3	ENST00000434436.7	protein_coding	1592522,1585055,1584540,1582622,1581092,1578335,1576678	1592708,1585214,1584677,1582712,1581269,1578538,1578158	Gene ID= ENSG00000071655.17 TPM= 41.74 Transcript Type= protein_coding
chr19	1576640	1585307	1576640	1585307	-	ENST00000592012.5@MBD3	ENST00000592012.5	protein_coding	1585055,1584540,1582622,1581092,1578335,1576640	1585307,1584677,1582712,1581269,1578534,1578158	Gene ID= ENSG00000071655.17 TPM= 12.55 Transcript Type= nonsense_mediated_decay
chr19	1597172	1605490	1597172	1605490	-	ENST00000591899.7@UQCR11	ENST00000591899.7	protein_coding	1605360,1599412,1597172	1605490,1599560,1598215	Gene ID= ENSG00000127540.11 TPM= 23.35 Transcript Type= protein_coding
chr19	1611038	1652646	1611038	1652646	-	transcript573.chr19.nic@TCF3	transcript573.chr19.nic	protein_coding	1652300,1650177,1646355,1632332,1632038,1627359,1625576,1623951,1622313,1622054,1621838,1621133,1620968,1619780,1619316,1619111,1615686,1612207,1611704,1611038	1652646,1650287,1646427,1632405,1632116,1627426,1625708,1624000,1622415,1622223,1621970,1621191,1621046,1619853,1619474,1619234,1615821,1612433,1611849,1611369	Gene ID= ENSG00000071564.14 TPM= 3.89 Transcript Type= NA
chr19	1611168	1652646	1611168	1652646	-	transcript577.chr19.nic@TCF3	transcript577.chr19.nic	protein_coding	1652300,1650177,1646355,1632332,1632038,1627359,1625576,1623951,1622313,1622054,1621838,1621133,1620968,1619780,1619316,1619111,1615686,1615285,1611704,1611168	1652646,1650287,1646427,1632405,1632116,1627426,1625708,1624000,1622415,1622223,1621970,1621191,1621046,1619853,1619474,1619234,1615821,1615520,1611849,1611369	Gene ID= ENSG00000071564.14 TPM= 4.67 Transcript Type= NA
chr19	1610965	1652646	1610965	1652646	-	transcript580.chr19.nic@TCF3	transcript580.chr19.nic	protein_coding	1652300,1650177,1646355,1632332,1632038,1627359,1625576,1623951,1622313,1622054,1621838,1621133,1620968,1619780,1619316,1619111,1615686,1612207,1610965	1652646,1650287,1646427,1632405,1632116,1627426,1625708,1624000,1622415,1622223,1621970,1621191,1621046,1619853,1619474,1619234,1615821,1612433,1611849	Gene ID= ENSG00000071564.14 TPM= 10.89 Transcript Type= NA
chr19	1815246	1819909	1815246	1819909	-	transcript595.chr19.nic@REXO1	transcript595.chr19.nic	protein_coding	1819018,1818706,1818482,1817707,1817219,1816698,1816431,1816225,1815246	1819909,1818843,1818595,1817780,1817329,1816813,1816569,1816345,1816154	Gene ID= ENSG00000079313.13 TPM= 3.5 Transcript Type= NA
chr19	1815246	1848463	1815246	1848463	-	ENST00000170168.8@REXO1	ENST00000170168.8	protein_coding	1848202,1826878,1825839,1823572,1821519,1820264,1819934,1819018,1818706,1818482,1817707,1817219,1816698,1816431,1816225,1815246	1848463,1828631,1825943,1823785,1821682,1820395,1820057,1819131,1818843,1818595,1817780,1817329,1816813,1816569,1816345,1816154	Gene ID= ENSG00000079313.13 TPM= 18.68 Transcript Type= protein_coding
chr19	1834609	1836765	1834609	1836765	+	transcript597.chr19.nnic@NA	transcript597.chr19.nnic	NA	1834609	1836765	Gene ID= novel_gene_chr19_598 TPM= 9.34 Transcript Type= NA
chr19	1852399	1863568	1852399	1863568	-	ENST00000250916.5@KLF16	ENST00000250916.5	protein_coding	1863041,1852399	1863568,1854760	Gene ID= ENSG00000129911.8 TPM= 77.06 Transcript Type= protein_coding
chr19	1874871	1876169	1874871	1876169	-	ENST00000565797.2@AC012615.1	ENST00000565797.2	lincRNA	1874871	1876169	Gene ID= ENSG00000261526.2 TPM= 9.34 Transcript Type= lincRNA
chr19	1876976	1885474	1876976	1885474	-	transcript613.chr19.nnic@ABHD17A	transcript613.chr19.nnic	protein_coding	1885352,1879921,1877508,1876976	1885474,1880115,1877687,1877425	Gene ID= ENSG00000129968.15 TPM= 23.94 Transcript Type= NA
chr19	1876976	1885502	1876976	1885502	-	transcript614.chr19.nic@ABHD17A	transcript614.chr19.nic	protein_coding	1885352,1881235,1877508,1876976	1885502,1881804,1880115,1877425	Gene ID= ENSG00000129968.15 TPM= 55.46 Transcript Type= NA
chr19	1905214	1926011	1905214	1926011	+	ENST00000316097.12@SCAMP4	ENST00000316097.12	protein_coding	1905214,1914979,1917694,1918127,1918889,1923070,1924108	1905439,1915026,1917822,1918283,1918990,1923187,1926011	Gene ID= ENSG00000227500.9 TPM= 96.91 Transcript Type= protein_coding
chr19	1905377	1913447	1905377	1913447	+	transcript642.chr19.nnic@SCAMP4	transcript642.chr19.nnic	protein_coding	1905377,1912081	1905439,1913447	Gene ID= ENSG00000227500.9 TPM= 2.92 Transcript Type= NA
chr19	1905404	1926013	1905404	1926013	+	ENST00000409472.5@SCAMP4	ENST00000409472.5	protein_coding	1905404,1914979,1917694,1918127,1923070,1924108	1905439,1915026,1917822,1918283,1923187,1926013	Gene ID= ENSG00000227500.9 TPM= 15.18 Transcript Type= protein_coding
chr19	1905378	1913447	1905378	1913447	+	ENST00000329478.3@ADAT3	ENST00000329478.3	protein_coding	1905378,1911890	1905439,1913447	Gene ID= ENSG00000213638.5 TPM= 2.92 Transcript Type= protein_coding
chr19	1941138	1981338	1941138	1981338	+	transcript622.chr19.nic@CSNK1G2	transcript622.chr19.nic	protein_coding	1941138,1969508,1978305,1978442,1978602,1978859,1979319,1979495,1979752,1979911,1980149	1941418,1969959,1978345,1978511,1978750,1979248,1979403,1979643,1979835,1980017,1981338	Gene ID= ENSG00000133275.15 TPM= 11.38 Transcript Type= NA
chr19	1941145	1981338	1941145	1981338	+	transcript625.chr19.nic@CSNK1G2	transcript625.chr19.nic	protein_coding	1941145,1969508,1978305,1978442,1978859,1979163,1979319,1979495,1979752,1979911,1980149	1941418,1969959,1978345,1978750,1979093,1979248,1979403,1979643,1979835,1980017,1981338	Gene ID= ENSG00000133275.15 TPM= 9.05 Transcript Type= NA
chr19	1941160	1981338	1941160	1981338	+	transcript626.chr19.nic@CSNK1G2	transcript626.chr19.nic	protein_coding	1941160,1969508,1978305,1978442,1978859,1979319,1979495,1979752,1979911,1980149	1941418,1969959,1978345,1978750,1979248,1979403,1979643,1979835,1980017,1981338	Gene ID= ENSG00000133275.15 TPM= 5.55 Transcript Type= NA
chr19	1941149	1981338	1941149	1981338	+	ENST00000255641.12@CSNK1G2	ENST00000255641.12	protein_coding	1941149,1969508,1978305,1978442,1978602,1978859,1979163,1979319,1979495,1979752,1979911,1980149	1941418,1969959,1978345,1978511,1978750,1979093,1979248,1979403,1979643,1979835,1980017,1981338	Gene ID= ENSG00000133275.15 TPM= 77.94 Transcript Type= protein_coding
chr19	1984716	1990370	1984716	1990370	+	transcript657.chr19.nnic@AC005306.1	transcript657.chr19.nnic	processed_transcript	1984716,1987583	1987304,1990370	Gene ID= ENSG00000267283.1 TPM= 8.17 Transcript Type= NA
chr19	1985438	2015733	1985438	2015733	-	transcript647.chr19.nic@BTBD2	transcript647.chr19.nic	protein_coding	2015297,1997344,1993020,1991877,1990717,1990004,1987500,1987166,1986830,1985438	2015733,1997463,1993176,1992056,1990822,1990201,1987692,1987253,1986976,1986649	Gene ID= ENSG00000133243.8 TPM= 13.14 Transcript Type= NA
chr19	1985438	2015723	1985438	2015723	-	transcript653.chr19.nnic@BTBD2	transcript653.chr19.nnic	protein_coding	2015362,1997344,1993020,1990717,1990004,1987500,1987166,1986830,1985438	2015723,1997463,1993176,1990822,1990201,1987692,1987253,1986976,1986649	Gene ID= ENSG00000133243.8 TPM= 13.14 Transcript Type= NA
chr19	1985438	2015724	1985438	2015724	-	ENST00000255608.8@BTBD2	ENST00000255608.8	protein_coding	2015297,1997344,1993020,1990717,1990004,1987500,1987166,1986830,1985438	2015724,1997463,1993176,1990822,1990201,1987692,1987253,1986976,1986649	Gene ID= ENSG00000133243.8 TPM= 129.89 Transcript Type= protein_coding
chr19	2037632	2055975	2037632	2055975	-	transcript660.chr19.nnic@MKNK2	transcript660.chr19.nnic	protein_coding	2055907,2051096,2050801,2046604,2046367,2046186,2043503,2043124,2042766,2042607,2042427,2041840,2041040,2040134,2037632	2055975,2051223,2050947,2046691,2046468,2046283,2043582,2043197,2042870,2042662,2042522,2042034,2041204,2040177,2037829	Gene ID= ENSG00000099875.14 TPM= 8.34 Transcript Type= NA
chr19	2037465	2051249	2037465	2051249	-	transcript673.chr19.nic@MKNK2	transcript673.chr19.nic	protein_coding	2051096,2050801,2046367,2046186,2043503,2043124,2042766,2042607,2042427,2041840,2041040,2040134,2037465	2051249,2050947,2046691,2046283,2043582,2043197,2042870,2042662,2042522,2042034,2041204,2040177,2037829	Gene ID= ENSG00000099875.14 TPM= 39.48 Transcript Type= NA
chr19	2037465	2051249	2037465	2051249	-	transcript675.chr19.nic@MKNK2	transcript675.chr19.nic	protein_coding	2051096,2050801,2046367,2046186,2043503,2043124,2042766,2042607,2042427,2041840,2041040,2040134,2037465	2051249,2050947,2046691,2046283,2043582,2043197,2042870,2042662,2042522,2042034,2041204,2040177,2039856	Gene ID= ENSG00000099875.14 TPM= 84.14 Transcript Type= NA
chr19	2037465	2051224	2037465	2051224	-	ENST00000309340.11@MKNK2	ENST00000309340.11	protein_coding	2051096,2050801,2046604,2046367,2046186,2043503,2043124,2042766,2042607,2042427,2041840,2041040,2040134,2037465	2051224,2050947,2046691,2046468,2046283,2043582,2043197,2042870,2042662,2042522,2042034,2041204,2040177,2037829	Gene ID= ENSG00000099875.14 TPM= 130.55 Transcript Type= protein_coding
chr19	2037482	2051244	2037482	2051244	-	ENST00000250896.7@MKNK2	ENST00000250896.7	protein_coding	2051096,2050801,2046604,2046367,2046186,2043503,2043124,2042766,2042607,2042427,2041840,2041040,2040134,2037482	2051244,2050947,2046691,2046468,2046283,2043582,2043197,2042870,2042662,2042522,2042034,2041204,2040177,2039856	Gene ID= ENSG00000099875.14 TPM= 60.59 Transcript Type= protein_coding
chr19	2037465	2050887	2037465	2050887	-	ENST00000591601.5@MKNK2	ENST00000591601.5	protein_coding	2050801,2046604,2046367,2046186,2043503,2043124,2042766,2042607,2042427,2041840,2041040,2040134,2037465	2050887,2046691,2046468,2046283,2043582,2043197,2042870,2042662,2042522,2042034,2041204,2040177,2039856	Gene ID= ENSG00000099875.14 TPM= 74.8 Transcript Type= protein_coding
chr19	2037465	2042140	2037465	2042140	-	ENST00000591142.5@MKNK2	ENST00000591142.5	protein_coding	2041840,2041040,2040134,2037465	2042140,2041204,2040177,2037829	Gene ID= ENSG00000099875.14 TPM= 12.46 Transcript Type= protein_coding
chr19	2040176	2044002	2040176	2044002	+	transcript684.chr19.nnic@NA	transcript684.chr19.nnic	NA	2040176	2044002	Gene ID= novel_gene_chr19_685 TPM= 42.62 Transcript Type= NA
chr19	2071038	2085339	2071038	2085339	-	transcript723.chr19.nic@MOB3A	transcript723.chr19.nic	protein_coding	2085175,2078140,2076811,2071038	2085339,2078679,2077013,2073424	Gene ID= ENSG00000172081.13 TPM= 2.34 Transcript Type= NA
chr19	2071038	2096332	2071038	2096332	-	ENST00000357066.7@MOB3A	ENST00000357066.7	protein_coding	2096226,2085175,2078140,2076811,2071038	2096332,2085328,2078679,2077013,2073424	Gene ID= ENSG00000172081.13 TPM= 107.42 Transcript Type= protein_coding
chr19	2096882	2099580	2096882	2099580	+	ENST00000395307.6@IZUMO4	ENST00000395307.6	protein_coding	2096882,2097252,2097424,2097929,2098052,2098287,2098436,2098787,2099255	2097162,2097332,2097495,2097955,2098127,2098334,2098450,2098804,2099580	Gene ID= ENSG00000099840.13 TPM= 1.17 Transcript Type= protein_coding
chr19	2100994	2151625	2100994	2151625	-	transcript689.chr19.nnic@AP3D1	transcript689.chr19.nnic	protein_coding	2151239,2138619,2137727,2137011,2132471,2130408,2129318,2129090,2127152,2123830,2123358,2121734,2121163,2120862,2118601,2117222,2116605,2116207,2115538,2115219,2114748,2114125,2113336,2112860,2111679,2111285,2110707,2110136,2109873,2109086,2108687,2100994	2151625,2138714,2137807,2137091,2132578,2130537,2129457,2129163,2127201,2123879,2123406,2121879,2121311,2121092,2118832,2117367,2116746,2116278,2115613,2115418,2114821,2114302,2113413,2112931,2111828,2111332,2110896,2110224,2109958,2109207,2108766,2102268	Gene ID= ENSG00000065000.15 TPM= 33.45 Transcript Type= NA
chr19	2100988	2151557	2100988	2151557	-	ENST00000345016.9@AP3D1	ENST00000345016.9	protein_coding	2151239,2138619,2137727,2137011,2132471,2130408,2129318,2129090,2127152,2123830,2123358,2121734,2121163,2120862,2118601,2117222,2116605,2116207,2115538,2115219,2114748,2114125,2111679,2111285,2110707,2110136,2109873,2109086,2108687,2100988	2151557,2138714,2137807,2137091,2132578,2130537,2129457,2129163,2127201,2123879,2123406,2121879,2121311,2121092,2118832,2117367,2116746,2116278,2115613,2115418,2114821,2114302,2111828,2111332,2110896,2110224,2109958,2109207,2108766,2102268	Gene ID= ENSG00000065000.15 TPM= 20.61 Transcript Type= protein_coding
chr19	2100994	2151541	2100994	2151541	-	ENST00000355272.10@AP3D1	ENST00000355272.10	protein_coding	2151239,2138619,2137727,2137011,2132471,2130408,2129318,2129090,2127152,2123830,2123358,2121734,2121163,2120862,2118601,2117222,2116605,2116207,2115538,2115219,2114748,2114125,2113336,2112860,2111679,2111285,2110707,2110136,2109873,2109086,2108687,2100994	2151541,2138714,2137807,2137091,2132578,2130537,2129457,2129163,2127201,2123879,2123406,2121879,2121311,2121092,2118832,2117367,2116746,2116278,2115613,2115418,2114821,2114302,2113413,2112967,2111828,2111332,2110896,2110224,2109958,2109207,2108766,2102268	Gene ID= ENSG00000065000.15 TPM= 41.04 Transcript Type= protein_coding
chr19	2164149	2232578	2164149	2232578	+	ENST00000398665.7@DOT1L	ENST00000398665.7	protein_coding	2164149,2180713,2185855,2189732,2191012,2193689,2194515,2199884,2202700,2206729,2207574,2208935,2210400,2210621,2211099,2211751,2213539,2213849,2214471,2216281,2216955,2217772,2220108,2221976,2223281,2225388,2226183,2229785	2164265,2180756,2185929,2189795,2191240,2193783,2194577,2199939,2202779,2206797,2207680,2208976,2210510,2210855,2211212,2211842,2213640,2213986,2214596,2216765,2217090,2217918,2220222,2222559,2223486,2225452,2227127,2232578	Gene ID= ENSG00000104885.17 TPM= 31.53 Transcript Type= protein_coding
chr19	2227561	2230015	2227561	2230015	+	transcript730.chr19.nnic@NA	transcript730.chr19.nnic	NA	2227561	2230015	Gene ID= novel_gene_chr19_731 TPM= 5.84 Transcript Type= NA
chr19	2233153	2236336	2233153	2236336	-	transcript712.chr19.nnic@PLEKHJ1	transcript712.chr19.nnic	protein_coding	2236155,2235923,2235762,2234150,2233998,2233153	2236336,2235933,2235828,2234240,2234061,2233905	Gene ID= ENSG00000104886.11 TPM= 13.45 Transcript Type= NA
chr19	2233153	2237704	2233153	2237704	-	ENST00000589097.5@PLEKHJ1	ENST00000589097.5	protein_coding	2237295,2236155,2235923,2235762,2234150,2233998,2233153	2237704,2236952,2235990,2235828,2234240,2234061,2233905	Gene ID= ENSG00000104886.11 TPM= 90.98 Transcript Type= protein_coding
chr19	2233149	2236326	2233149	2236326	-	ENST00000587962.6@PLEKHJ1	ENST00000587962.6	protein_coding	2236155,2235923,2235762,2234150,2233149	2236326,2235990,2235828,2234240,2234061	Gene ID= ENSG00000104886.11 TPM= 5.37 Transcript Type= protein_coding
chr19	2233153	2236294	2233153	2236294	-	ENST00000591099.6@PLEKHJ1	ENST00000591099.6	protein_coding	2236155,2235923,2235762,2233998,2233153	2236294,2235990,2235828,2234061,2233905	Gene ID= ENSG00000104886.11 TPM= 3.71 Transcript Type= protein_coding
chr19	2233156	2236320	2233156	2236320	-	ENST00000326631.6@PLEKHJ1	ENST00000326631.6	protein_coding	2236155,2235923,2235762,2234150,2233998,2233156	2236320,2235990,2235828,2234240,2234061,2233905	Gene ID= ENSG00000104886.11 TPM= 14.22 Transcript Type= protein_coding
chr19	2236504	2248679	2236504	2248679	+	ENST00000221494.9@SF3A2	ENST00000221494.9	protein_coding	2236504,2243382,2244544,2244733,2245446,2246753,2246882,2247594,2247767	2236901,2243544,2244615,2244779,2245555,2246802,2247022,2247662,2248679	Gene ID= ENSG00000104897.9 TPM= 46.7 Transcript Type= protein_coding
chr19	2252252	2256417	2252252	2256417	-	ENST00000300961.10@JSRP1	ENST00000300961.10	protein_coding	2256383,2255206,2254445,2254187,2253620,2252912,2252252	2256417,2255344,2254482,2254301,2253793,2253003,2252796	Gene ID= ENSG00000167476.10 TPM= 1.17 Transcript Type= protein_coding
chr19	2269509	2273488	2269509	2273488	+	ENST00000590943.6@OAZ1	ENST00000590943.6	protein_coding	2269509,2271782,2272735,2272972	2269744,2271954,2272820,2273488	Gene ID= ENSG00000104904.12 TPM= 24.52 Transcript Type= nonsense_mediated_decay
chr19	2269534	2273331	2269534	2273331	+	ENST00000582888.8@OAZ1	ENST00000582888.8	protein_coding	2269534,2271391,2271444,2271782,2272735,2272972	2269744,2271442,2271530,2271954,2272820,2273331	Gene ID= ENSG00000104904.12 TPM= 339.77 Transcript Type= protein_coding
chr19	2269520	2273221	2269520	2273221	+	ENST00000581150.6@OAZ1	ENST00000581150.6	protein_coding	2269520,2271385,2272735,2272972	2269744,2271954,2272820,2273221	Gene ID= ENSG00000104904.12 TPM= 1.17 Transcript Type= retained_intron
chr19	2274622	2282176	2274622	2282176	-	ENST00000342063.4@C19orf35	ENST00000342063.4	protein_coding	2282087,2280850,2278584,2274622	2282176,2280935,2279113,2276489	Gene ID= ENSG00000188305.5 TPM= 5.84 Transcript Type= protein_coding
chr19	2299725	2301450	2299725	2301450	-	transcript762.chr19.nnic@NA	transcript762.chr19.nnic	NA	2299725	2301450	Gene ID= novel_gene_chr19_763 TPM= 2.34 Transcript Type= NA
chr19	2321521	2328611	2321521	2328611	-	ENST00000585409.2@LSM7	ENST00000585409.2	protein_coding	2328561,2328387,2324125,2321521	2328611,2328477,2324192,2321822	Gene ID= ENSG00000130332.14 TPM= 14.01 Transcript Type= protein_coding
chr19	2321517	2328620	2321517	2328620	-	ENST00000252622.14@LSM7	ENST00000252622.14	protein_coding	2328561,2328387,2324125,2321517	2328620,2328477,2324196,2321822	Gene ID= ENSG00000130332.14 TPM= 21.02 Transcript Type= protein_coding
chr19	2328630	2354806	2328630	2354806	+	ENST00000613503.4@SPPL2B	ENST00000613503.4	protein_coding	2328630,2334602,2337443,2338752,2339069,2339824,2340076,2340898,2343211,2343965,2344362,2344553,2345253,2351434,2352946	2328775,2334721,2337625,2338841,2339208,2339966,2340172,2341014,2343292,2344039,2344424,2344652,2345330,2351594,2354806	Gene ID= ENSG00000005206.16 TPM= 52.54 Transcript Type= protein_coding
chr19	2328647	2353928	2328647	2353928	+	transcript772.chr19.nic@SPPL2B	transcript772.chr19.nic	protein_coding	2328647,2334602,2337443,2339069,2339824,2340076,2340898,2343211,2343965,2344362,2344553,2345253,2351434,2352946	2328775,2334721,2338841,2339208,2339966,2340172,2341014,2343292,2344039,2344424,2344652,2345330,2351594,2353928	Gene ID= ENSG00000005206.16 TPM= 6.42 Transcript Type= NA
chr19	2328647	2353928	2328647	2353928	+	transcript775.chr19.nnic@SPPL2B	transcript775.chr19.nnic	protein_coding	2328647,2337443,2338752,2339069,2339824,2340076,2340898,2343211,2343965,2344362,2344553,2345253,2351434,2352946	2328775,2337625,2338841,2339208,2339966,2340172,2341014,2343292,2344039,2344424,2344652,2345330,2351594,2353928	Gene ID= ENSG00000005206.16 TPM= 4.09 Transcript Type= NA
chr19	2330277	2332474	2330277	2332474	-	transcript778.chr19.nnic@NA	transcript778.chr19.nnic	NA	2330277	2332474	Gene ID= novel_gene_chr19_779 TPM= 8.17 Transcript Type= NA
chr19	2425624	2427894	2425624	2427894	-	ENST00000215570.7@TIMM13	ENST00000215570.7	protein_coding	2427414,2427256,2425624	2427894,2427324,2427046	Gene ID= ENSG00000099800.7 TPM= 14.01 Transcript Type= protein_coding
chr19	2426565	2456986	2426565	2456986	-	transcript780.chr19.nic@LMNB2	transcript780.chr19.nic	protein_coding	2456670,2444404,2438375,2438163,2435001,2434788,2434295,2433826,2432416,2431783,2431548,2427414,2427256,2426565	2456986,2444540,2438531,2438288,2435171,2434913,2434515,2434105,2432523,2431902,2431658,2427993,2427324,2427046	Gene ID= ENSG00000176619.12 TPM= 8.17 Transcript Type= NA
chr19	2428166	2456996	2428166	2456996	-	ENST00000325327.3@LMNB2	ENST00000325327.3	protein_coding	2456670,2444404,2438375,2438163,2435001,2434788,2434295,2433826,2432416,2431783,2431548,2428166	2456996,2444540,2438531,2438288,2435171,2434913,2434515,2434105,2432523,2431902,2431658,2430952	Gene ID= ENSG00000176619.12 TPM= 49.04 Transcript Type= protein_coding
chr19	2476127	2478259	2476127	2478259	+	ENST00000215631.8@GADD45B	ENST00000215631.8	protein_coding	2476127,2476529,2477029,2477488	2476402,2476630,2477251,2478259	Gene ID= ENSG00000099860.8 TPM= 29.19 Transcript Type= protein_coding
chr19	2476132	2478260	2476132	2478260	+	transcript792.chr19.nnic@NA	transcript792.chr19.nnic	NA	2476132	2478260	Gene ID= novel_gene_chr19_793 TPM= 2.34 Transcript Type= NA
chr19	2714567	2721418	2714567	2721418	-	ENST00000323469.4@DIRAS1	ENST00000323469.4	protein_coding	2721304,2714567	2721418,2717875	Gene ID= ENSG00000176490.4 TPM= 1.17 Transcript Type= protein_coding
chr19	2732524	2740152	2732524	2740152	-	ENST00000269740.8@SLC39A3	ENST00000269740.8	protein_coding	2739945,2737048,2732524	2740152,2737379,2733485	Gene ID= ENSG00000141873.10 TPM= 107.42 Transcript Type= protein_coding
chr19	2734524	2740028	2734524	2740028	-	ENST00000455372.2@SLC39A3	ENST00000455372.2	protein_coding	2739945,2734524	2740028,2737379	Gene ID= ENSG00000141873.10 TPM= 7.01 Transcript Type= protein_coding
chr19	2754714	2783371	2754714	2783371	-	ENST00000221566.6@SGTA	ENST00000221566.6	protein_coding	2783233,2768969,2767580,2767136,2765186,2763653,2762506,2761460,2759257,2757693,2757337,2754714	2783371,2769091,2767686,2767220,2765285,2763757,2762644,2761522,2759294,2757782,2757457,2755933	Gene ID= ENSG00000104969.9 TPM= 142.45 Transcript Type= protein_coding
chr19	2785460	2815807	2785460	2815807	+	ENST00000307741.10@THOP1	ENST00000307741.10	protein_coding	2785460,2790421,2794764,2796081,2799689,2805016,2806917,2807442,2808243,2810304,2810640,2811598,2813115	2785678,2790633,2794912,2796188,2799791,2805176,2807052,2807808,2808444,2810490,2810768,2811734,2815807	Gene ID= ENSG00000172009.14 TPM= 4.67 Transcript Type= protein_coding
chr19	2785487	2813599	2785487	2813599	+	transcript818.chr19.nic@THOP1	transcript818.chr19.nic	protein_coding	2785487,2790421,2794764,2796081,2799689,2805016,2806917,2807442,2808243,2810304,2810640,2811634,2813115	2785678,2790633,2794912,2796188,2799791,2805176,2807052,2807808,2808444,2810490,2810768,2811734,2813599	Gene ID= ENSG00000172009.14 TPM= 2.72 Transcript Type= NA
chr19	2785487	2813599	2785487	2813599	+	transcript819.chr19.nic@THOP1	transcript819.chr19.nic	protein_coding	2785487,2790421,2794764,2796081,2799689,2805016,2806917,2807442,2808243,2810304,2811598,2813115	2785678,2790633,2794912,2796188,2799791,2805176,2807052,2807808,2808444,2810768,2811734,2813599	Gene ID= ENSG00000172009.14 TPM= 5.06 Transcript Type= NA
chr19	2785487	2813599	2785487	2813599	+	transcript821.chr19.nic@THOP1	transcript821.chr19.nic	protein_coding	2785487,2790421,2794764,2796081,2799689,2805016,2806917,2807442,2810304,2810640,2811598,2813115	2785678,2790633,2794912,2796188,2799791,2805176,2807052,2808444,2810490,2810768,2811734,2813599	Gene ID= ENSG00000172009.14 TPM= 5.06 Transcript Type= NA
chr19	2786767	2789470	2786767	2789470	-	transcript824.chr19.nnic@NA	transcript824.chr19.nnic	NA	2786767	2789470	Gene ID= novel_gene_chr19_825 TPM= 4.67 Transcript Type= NA
chr19	2830558	2835772	2830558	2835772	+	ENST00000588534.1@ZNF554	ENST00000588534.1	protein_coding	2830558,2833681	2832494,2835772	Gene ID= ENSG00000172006.11 TPM= 1.17 Transcript Type= retained_intron
chr19	2819874	2835773	2819874	2835773	+	ENST00000317243.9@ZNF554	ENST00000317243.9	protein_coding	2819874,2823040,2827617,2832303,2833681	2820124,2823112,2827743,2832494,2835773	Gene ID= ENSG00000172006.11 TPM= 2.34 Transcript Type= protein_coding
chr19	2820686	2823197	2820686	2823197	-	transcript833.chr19.nnic@NA	transcript833.chr19.nnic	NA	2820686	2823197	Gene ID= novel_gene_chr19_834 TPM= 3.5 Transcript Type= NA
chr19	2826207	2828377	2826207	2828377	-	transcript835.chr19.nnic@NA	transcript835.chr19.nnic	NA	2826207	2828377	Gene ID= novel_gene_chr19_836 TPM= 3.5 Transcript Type= NA
chr19	2841435	2860484	2841435	2860484	+	ENST00000334241.8@ZNF555	ENST00000334241.8	protein_coding	2841435,2850587,2851468,2852380	2841575,2850713,2851651,2860484	Gene ID= ENSG00000186300.11 TPM= 1.17 Transcript Type= protein_coding
chr19	2841444	2854209	2841444	2854209	+	ENST00000591539.1@ZNF555	ENST00000591539.1	protein_coding	2841444,2850587,2851468,2852383	2841575,2850713,2851651,2854209	Gene ID= ENSG00000186300.11 TPM= 1.17 Transcript Type= protein_coding
chr19	2900898	2918476	2900898	2918476	+	ENST00000306908.9@ZNF57	ENST00000306908.9	protein_coding	2900898,2915522,2916078,2916924	2901048,2915648,2916249,2918476	Gene ID= ENSG00000171970.12 TPM= 14.01 Transcript Type= protein_coding
chr19	2933218	2944933	2933218	2944933	-	ENST00000314531.4@ZNF77	ENST00000314531.4	protein_coding	2944838,2939281,2936524,2933218	2944933,2939407,2936704,2934815	Gene ID= ENSG00000175691.8 TPM= 2.34 Transcript Type= protein_coding
chr19	2977446	2995184	2977446	2995184	+	ENST00000246112.8@TLE6	ENST00000246112.8	protein_coding	2977446,2978198,2980100,2981538,2982148,2986829,2986983,2987356,2987724,2987898,2988091,2989061,2989535,2991843,2993432,2994019,2994900	2977610,2978284,2980182,2981583,2982189,2986891,2987238,2987372,2987790,2987974,2988128,2989313,2989785,2991984,2993582,2994095,2995184	Gene ID= ENSG00000104953.19 TPM= 4.67 Transcript Type= protein_coding
chr19	2977565	2995179	2977565	2995179	+	transcript852.chr19.nic@TLE6	transcript852.chr19.nic	protein_coding	2977565,2978198,2980100,2981538,2982148,2986829,2986983,2987356,2987724,2989535,2991843,2993432,2994019,2994900	2977619,2978284,2980182,2981583,2982189,2986891,2987238,2987372,2989313,2989785,2991984,2993582,2994095,2995179	Gene ID= ENSG00000104953.19 TPM= 3.5 Transcript Type= NA
chr19	2997639	3029363	2997639	3029363	-	transcript870.chr19.nnic@TLE2	transcript870.chr19.nnic	protein_coding	3028881,3028706,3028319,3027829,3025020,3019699,3019283,3017840,3015653,3014570,3013669,3011022,3009578,3008869,3006420,3005721,3005437,3002353,3000647,2997639	3029363,3028803,3028382,3027873,3025082,3019773,3019466,3017859,3015760,3014614,3013818,3011160,3009702,3008945,3006669,3005968,3005584,3002503,3000723,2997955	Gene ID= ENSG00000065717.14 TPM= 25.45 Transcript Type= NA
chr19	2997639	3029299	2997639	3029299	-	transcript874.chr19.nnic@TLE2	transcript874.chr19.nnic	protein_coding	3028881,3028706,3028319,3027829,3025020,3019699,3019283,3017840,3015653,3014570,3013669,3011022,3009542,3008869,3006420,3005721,3005437,3002353,3000647,2997639	3029299,3028803,3028382,3027873,3025082,3019773,3019466,3017859,3015760,3014614,3013818,3011160,3009702,3008945,3006720,3005968,3005584,3002503,3000723,2997955	Gene ID= ENSG00000065717.14 TPM= 54.55 Transcript Type= NA
chr19	2997639	3029287	2997639	3029287	-	transcript875.chr19.nnic@TLE2	transcript875.chr19.nnic	protein_coding	3028881,3028706,3028319,3027829,3025020,3019699,3019283,3017840,3015653,3014570,3013669,3011022,3009578,3008869,3006420,3005721,3005437,3002353,3000647,2997639	3029287,3028803,3028382,3027873,3025082,3019773,3019466,3017859,3015760,3014614,3013818,3011160,3009702,3008945,3006720,3005968,3005584,3002503,3000723,2997955	Gene ID= ENSG00000065717.14 TPM= 12.22 Transcript Type= NA
chr19	2997639	3029276	2997639	3029276	-	transcript880.chr19.nic@TLE2	transcript880.chr19.nic	protein_coding	3028881,3028706,3028319,3027829,3025020,3019283,3017840,3015653,3014570,3013669,3011022,3009542,3008869,3006420,3005721,3005437,3002353,3000647,2997639	3029276,3028803,3028382,3027873,3025082,3019773,3017859,3015760,3014614,3013818,3011160,3009702,3008945,3006669,3005968,3005584,3002503,3000723,2997955	Gene ID= ENSG00000065717.14 TPM= 41.19 Transcript Type= NA
chr19	2997639	3029248	2997639	3029248	-	transcript883.chr19.nnic@TLE2	transcript883.chr19.nnic	protein_coding	3028881,3028706,3028319,3027829,3025020,3019283,3017840,3015653,3014570,3013669,3011022,3009542,3008869,3006420,3005721,3005437,3002353,3000647,2997639	3029248,3028803,3028382,3027873,3025082,3019773,3017859,3015760,3014614,3013818,3011160,3009702,3008945,3006720,3005968,3005584,3002503,3000723,2997955	Gene ID= ENSG00000065717.14 TPM= 17.44 Transcript Type= NA
chr19	2997646	3029281	2997646	3029281	-	transcript888.chr19.nic@TLE2	transcript888.chr19.nic	protein_coding	3028881,3028706,3028319,3027829,3025020,3019699,3019283,3017840,3015653,3014570,3013669,3011022,3009542,3008869,3006420,3005721,3005437,3002353,2997646	3029281,3028803,3028382,3027873,3025082,3019773,3019466,3017859,3015760,3014614,3013818,3011160,3009702,3008945,3006669,3005968,3005584,3002503,2997955	Gene ID= ENSG00000065717.14 TPM= 12.1 Transcript Type= NA
chr19	3052910	3063107	3052910	3063107	-	ENST00000221561.12@AES	ENST00000221561.12	protein_coding	3062700,3061160,3057679,3056312,3055664,3054120,3052910	3063107,3061257,3057742,3056356,3055726,3054194,3054040	Gene ID= ENSG00000104964.14 TPM= 57.21 Transcript Type= protein_coding
chr19	3053162	3062557	3053162	3062557	-	ENST00000327141.8@AES	ENST00000327141.8	protein_coding	3062174,3061160,3057679,3056312,3055664,3054120,3053162	3062557,3061257,3057742,3056356,3055726,3054194,3054040	Gene ID= ENSG00000104964.14 TPM= 195.37 Transcript Type= protein_coding
chr19	3094410	3124004	3094410	3124004	+	ENST00000078429.8@GNA11	ENST00000078429.8	protein_coding	3094410,3110149,3113330,3114944,3118924,3119206,3120989	3094787,3110333,3113484,3115072,3119053,3119359,3124004	Gene ID= ENSG00000088256.8 TPM= 171.64 Transcript Type= protein_coding
chr19	3117150	3121454	3117150	3121454	+	ENST00000590534.1@GNA11	ENST00000590534.1	protein_coding	3117150,3120989	3119359,3121454	Gene ID= ENSG00000088256.8 TPM= 7.01 Transcript Type= retained_intron
chr19	3136193	3163769	3136193	3163769	+	ENST00000262958.3@GNA15	ENST00000262958.3	protein_coding	3136193,3148591,3150131,3151707,3155823,3157728,3162793	3136595,3148775,3150285,3151835,3155952,3157881,3163769	Gene ID= ENSG00000060558.3 TPM= 28.02 Transcript Type= protein_coding
chr19	3178768	3180332	3178768	3180332	+	ENST00000246115.4@S1PR4	ENST00000246115.4	protein_coding	3178768	3180332	Gene ID= ENSG00000125910.5 TPM= 51.37 Transcript Type= protein_coding
chr19	3176528	3180331	3176528	3180331	+	transcript958.chr19.nnic@NA	transcript958.chr19.nnic	NA	3176528	3180331	Gene ID= novel_gene_chr19_959 TPM= 16.35 Transcript Type= NA
chr19	3178772	3181919	3178772	3181919	+	transcript960.chr19.nnic@NA	transcript960.chr19.nnic	NA	3178772	3181919	Gene ID= novel_gene_chr19_961 TPM= 4.67 Transcript Type= NA
chr19	3185651	3209575	3185651	3209575	+	transcript971.chr19.nic@NCLN	transcript971.chr19.nic	protein_coding	3185651,3192470,3193284,3196183,3198817,3201523,3203756,3204005,3204573,3205939,3206152,3206265,3207198,3207391,3207629	3186214,3192660,3193428,3196277,3198897,3201626,3203844,3204144,3204751,3206026,3206190,3206425,3207251,3207469,3209575	Gene ID= ENSG00000125912.10 TPM= 73.94 Transcript Type= NA
chr19	3359405	3462967	3359405	3462967	+	transcript994.chr19.nic@NFIC	transcript994.chr19.nic	protein_coding	3359405,3381712,3425106,3433518,3434277,3435083,3449014,3452482,3462752	3359685,3382243,3425177,3433592,3434400,3435207,3449139,3452666,3462967	Gene ID= ENSG00000141905.18 TPM= 13.63 Transcript Type= NA
chr19	3366549	3462967	3366549	3462967	+	ENST00000341919.7@NFIC	ENST00000341919.7	protein_coding	3366549,3381712,3425106,3433518,3434277,3435083,3449014,3452482,3462752	3366666,3382243,3425177,3433592,3434400,3435207,3449139,3452666,3462967	Gene ID= ENSG00000141905.18 TPM= 10.12 Transcript Type= protein_coding
chr19	3366586	3462907	3366586	3462907	+	ENST00000443272.2@NFIC	ENST00000443272.2	protein_coding	3366586,3381712,3425106,3433518,3434277,3435083,3449014,3452482,3453763,3456550,3462752	3366666,3382243,3425177,3433592,3434400,3435207,3449139,3452666,3453916,3456635,3462907	Gene ID= ENSG00000141905.18 TPM= 8.96 Transcript Type= protein_coding
chr19	3372851	3373699	3372851	3373699	-	transcript1006.chr19.nnic@NA	transcript1006.chr19.nnic	NA	3372851	3373699	Gene ID= novel_gene_chr19_1007 TPM= 2.34 Transcript Type= NA
chr19	3411330	3414419	3411330	3414419	-	transcript1008.chr19.nnic@NA	transcript1008.chr19.nnic	NA	3411330	3414419	Gene ID= novel_gene_chr19_1009 TPM= 9.34 Transcript Type= NA
chr19	3414526	3416176	3414526	3416176	+	transcript1000.chr19.nnic@NA	transcript1000.chr19.nnic	NA	3414526	3416176	Gene ID= novel_gene_chr19_1001 TPM= 3.5 Transcript Type= NA
chr19	3416888	3417930	3416888	3417930	-	transcript1004.chr19.nnic@NA	transcript1004.chr19.nnic	NA	3416888	3417930	Gene ID= novel_gene_chr19_1005 TPM= 4.67 Transcript Type= NA
chr19	3443390	3445664	3443390	3445664	-	transcript1010.chr19.nnic@NA	transcript1010.chr19.nnic	NA	3443390	3445664	Gene ID= novel_gene_chr19_1011 TPM= 2.34 Transcript Type= NA
chr19	3462813	3463664	3462813	3463664	-	transcript1012.chr19.nnic@NA	transcript1012.chr19.nnic	NA	3462813	3463664	Gene ID= novel_gene_chr19_1013 TPM= 4.67 Transcript Type= NA
chr19	3464610	3465372	3464610	3465372	+	transcript1002.chr19.nnic@NA	transcript1002.chr19.nnic	NA	3464610	3465372	Gene ID= novel_gene_chr19_1003 TPM= 5.84 Transcript Type= NA
chr19	3490822	3500940	3490822	3500940	-	ENST00000427575.5@DOHH	ENST00000427575.5	protein_coding	3500561,3496541,3494028,3492262,3490822	3500940,3496886,3494104,3492499,3491811	Gene ID= ENSG00000129932.8 TPM= 66.55 Transcript Type= protein_coding
chr19	3490824	3500689	3490824	3500689	-	transcript1018.chr19.nic@DOHH	transcript1018.chr19.nic	protein_coding	3500561,3496541,3494028,3490824	3500689,3496886,3494104,3492499	Gene ID= ENSG00000129932.8 TPM= 5.84 Transcript Type= NA
chr19	3506313	3536187	3506313	3536187	+	transcript1028.chr19.nic@FZR1	transcript1028.chr19.nic	protein_coding	3506313,3522956,3525868,3526120,3526259,3526980,3530792,3531714,3531911,3532417,3533294,3534421,3534795	3506474,3523058,3525993,3526183,3526386,3527814,3530857,3531816,3532095,3532650,3533398,3534513,3536187	Gene ID= ENSG00000105325.13 TPM= 2.34 Transcript Type= NA
chr19	3506273	3538330	3506273	3538330	+	ENST00000441788.6@FZR1	ENST00000441788.6	protein_coding	3506273,3522956,3525868,3526120,3526259,3526980,3527631,3530792,3531714,3531911,3532417,3533294,3534421,3534795	3506474,3523058,3525993,3526183,3526386,3527062,3527814,3530857,3531816,3532095,3532650,3533398,3534513,3538330	Gene ID= ENSG00000105325.13 TPM= 4.67 Transcript Type= protein_coding
chr19	3538275	3557614	3538275	3557614	-	transcript1031.chr19.nic@MFSD12	transcript1031.chr19.nic	protein_coding	3557106,3550984,3548123,3547848,3547455,3547272,3546255,3546074,3544809,3542776,3538275	3557614,3551194,3548267,3548030,3547547,3547364,3546425,3546168,3544939,3542977,3538756	Gene ID= ENSG00000161091.12 TPM= 24.52 Transcript Type= NA
chr19	3538275	3557614	3538275	3557614	-	transcript1033.chr19.nic@MFSD12	transcript1033.chr19.nic	protein_coding	3557106,3550984,3548123,3547848,3547455,3547272,3546255,3546074,3544809,3542776,3538275	3557614,3551194,3548267,3548030,3547547,3547364,3546425,3546168,3544939,3544732,3538756	Gene ID= ENSG00000161091.12 TPM= 15.76 Transcript Type= NA
chr19	3538261	3557614	3538261	3557614	-	transcript1034.chr19.nic@MFSD12	transcript1034.chr19.nic	protein_coding	3557106,3550984,3548123,3547848,3547455,3547272,3546255,3546074,3544809,3538261	3557614,3551194,3548267,3548030,3547547,3547364,3546425,3546168,3544939,3538756	Gene ID= ENSG00000161091.12 TPM= 35.03 Transcript Type= NA
chr19	3544199	3557573	3544199	3557573	-	ENST00000355415.6@MFSD12	ENST00000355415.6	protein_coding	3557106,3550984,3548123,3547848,3547455,3547272,3546255,3546074,3544809,3544199	3557573,3551194,3548267,3548030,3547547,3547364,3546425,3546168,3544939,3544732	Gene ID= ENSG00000161091.12 TPM= 153.54 Transcript Type= protein_coding
chr19	3572914	3579088	3572914	3579088	+	transcript1085.chr19.nic@HMG20B	transcript1085.chr19.nic	protein_coding	3572914,3573292,3573692,3575540,3576261,3576553,3576892,3577981,3578509	3572994,3573347,3574586,3575660,3576307,3576625,3577107,3578113,3579088	Gene ID= ENSG00000064961.18 TPM= 30.65 Transcript Type= NA
chr19	3572944	3579088	3572944	3579088	+	transcript1086.chr19.nic@HMG20B	transcript1086.chr19.nic	protein_coding	3572944,3573692,3574383,3575540,3576261,3576553,3576892,3577981,3578509	3573347,3573800,3574586,3575660,3576307,3576625,3577107,3578113,3579088	Gene ID= ENSG00000064961.18 TPM= 18.97 Transcript Type= NA
chr19	3572938	3579088	3572938	3579088	+	ENST00000333651.10@HMG20B	ENST00000333651.10	protein_coding	3572938,3573292,3573692,3574383,3575540,3576261,3576553,3576892,3577981,3578509	3572994,3573347,3573800,3574586,3575660,3576307,3576625,3577107,3578113,3579088	Gene ID= ENSG00000064961.18 TPM= 168.43 Transcript Type= protein_coding
chr19	3585553	3593541	3585553	3593541	+	ENST00000322315.5@GIPC3	ENST00000322315.5	protein_coding	3585553,3586495,3586814,3589443,3589831,3590039	3585822,3586680,3586994,3589555,3589912,3593541	Gene ID= ENSG00000179855.5 TPM= 15.18 Transcript Type= protein_coding
chr19	3594506	3606840	3594506	3606840	-	ENST00000375190.8@TBXA2R	ENST00000375190.8	protein_coding	3606530,3599849,3594506	3606840,3600717,3595933	Gene ID= ENSG00000006638.11 TPM= 5.84 Transcript Type= protein_coding
chr19	3610641	3626815	3610641	3626815	-	ENST00000429344.6@CACTIN	ENST00000429344.6	protein_coding	3626596,3623688,3620707,3620127,3619080,3618875,3614397,3613464,3613058,3610641	3626815,3624162,3620802,3620272,3619242,3618989,3614589,3613586,3613365,3612413	Gene ID= ENSG00000105298.13 TPM= 40.87 Transcript Type= protein_coding
chr19	3610650	3626815	3610650	3626815	-	ENST00000248420.9@CACTIN	ENST00000248420.9	protein_coding	3626596,3623688,3620707,3620127,3619080,3618875,3614397,3613464,3613058,3611904,3610650	3626815,3624162,3620802,3620272,3619242,3618989,3614589,3613586,3613365,3612413,3610971	Gene ID= ENSG00000105298.13 TPM= 5.84 Transcript Type= protein_coding
chr19	3651056	3660074	3651056	3660074	-	transcript1105.chr19.nic@PIP5K1C	transcript1105.chr19.nic	protein_coding	3656405,3653290,3651056	3660074,3653589,3652031	Gene ID= ENSG00000186111.9 TPM= 2.34 Transcript Type= NA
chr19	3630183	3700479	3630183	3700479	-	ENST00000335312.7@PIP5K1C	ENST00000335312.7	protein_coding	3700297,3667322,3664822,3661871,3660966,3656405,3653290,3651826,3648625,3647338,3645974,3644087,3643243,3642907,3641705,3638884,3633437,3630183	3700479,3667353,3664914,3662001,3661083,3656557,3653589,3652031,3648708,3647386,3646058,3644251,3643381,3642939,3641809,3639016,3633520,3633169	Gene ID= ENSG00000186111.9 TPM= 81.73 Transcript Type= protein_coding
chr19	3708109	3750812	3708109	3750812	+	ENST00000541714.6@TJP3	ENST00000541714.6	protein_coding	3708109,3728424,3728604,3730028,3730355,3731935,3733753,3734327,3735566,3735869,3736165,3738555,3738897,3740552,3743939,3746011,3746485,3746776,3747794,3750138,3750582	3708561,3728480,3728713,3730130,3730706,3732038,3733912,3734435,3735639,3735935,3736321,3738663,3739134,3740763,3744034,3746081,3746695,3746876,3748081,3750184,3750812	Gene ID= ENSG00000105289.14 TPM= 43.78 Transcript Type= protein_coding
chr19	3721737	3750809	3721737	3750809	+	ENST00000589378.5@TJP3	ENST00000589378.5	protein_coding	3721737,3728424,3728604,3730028,3730355,3731935,3733753,3734327,3735566,3735869,3736165,3738555,3738897,3740552,3743939,3746011,3746485,3746776,3747794,3750138,3750582	3721910,3728480,3728713,3730130,3730706,3732038,3733912,3734435,3735639,3735935,3736321,3738663,3739134,3740763,3744034,3746081,3746695,3746876,3748081,3750184,3750809	Gene ID= ENSG00000105289.14 TPM= 8.76 Transcript Type= protein_coding
chr19	3750880	3761699	3750880	3761699	-	ENST00000316757.3@APBA3	ENST00000316757.3	protein_coding	3761536,3759689,3759561,3754195,3754019,3753765,3752820,3752508,3751434,3751189,3750880	3761699,3760301,3759600,3754340,3754105,3753926,3752990,3752720,3751553,3751329,3751097	Gene ID= ENSG00000011132.11 TPM= 36.78 Transcript Type= protein_coding
chr19	3750880	3761688	3750880	3761688	-	transcript1082.chr19.nic@APBA3	transcript1082.chr19.nic	protein_coding	3761536,3759689,3759561,3754195,3754019,3753765,3752820,3751434,3751189,3750880	3761688,3760301,3759600,3754340,3754105,3753926,3752990,3752720,3751329,3751097	Gene ID= ENSG00000011132.11 TPM= 2.92 Transcript Type= NA
chr19	3762664	3767565	3762664	3767565	+	ENST00000330133.4@MRPL54	ENST00000330133.4	protein_coding	3762664,3765166,3767261	3762818,3765331,3767565	Gene ID= ENSG00000183617.4 TPM= 26.85 Transcript Type= protein_coding
chr19	3777973	3786416	3777973	3786416	-	ENST00000310132.10@MATK	ENST00000310132.10	protein_coding	3786169,3785064,3784825,3784338,3784124,3783814,3783126,3781607,3779698,3779533,3779378,3778992,3778509,3777973	3786416,3785286,3784884,3784451,3784239,3784033,3783219,3781672,3779797,3779617,3779451,3779187,3778595,3778422	Gene ID= ENSG00000007264.14 TPM= 74.73 Transcript Type= protein_coding
chr19	3777973	3786410	3777973	3786410	-	transcript1120.chr19.nic@MATK	transcript1120.chr19.nic	protein_coding	3786169,3785064,3784825,3784338,3784124,3783814,3783126,3781607,3779533,3779378,3778992,3778509,3777973	3786410,3785286,3784884,3784451,3784239,3784033,3783219,3781672,3779797,3779451,3779187,3778595,3778422	Gene ID= ENSG00000007264.14 TPM= 4.67 Transcript Type= NA
chr19	3782441	3786289	3782441	3786289	-	transcript1128.chr19.nic@MATK	transcript1128.chr19.nic	protein_coding	3786169,3785064,3784825,3784338,3784124,3783814,3782441	3786289,3785286,3784884,3784451,3784239,3784033,3783219	Gene ID= ENSG00000007264.14 TPM= 5.25 Transcript Type= NA
chr19	3782441	3786432	3782441	3786432	-	transcript1130.chr19.nic@MATK	transcript1130.chr19.nic	protein_coding	3786169,3784825,3784338,3784124,3783814,3782441	3786432,3784884,3784451,3784239,3784033,3783219	Gene ID= ENSG00000007264.14 TPM= 4.09 Transcript Type= NA
chr19	3777973	3786413	3777973	3786413	-	ENST00000395040.6@MATK	ENST00000395040.6	protein_coding	3786169,3784825,3784338,3784124,3783814,3783126,3781607,3779698,3779533,3779378,3778992,3778509,3777973	3786413,3784884,3784451,3784239,3784033,3783219,3781672,3779797,3779617,3779451,3779187,3778595,3778422	Gene ID= ENSG00000007264.14 TPM= 15.18 Transcript Type= protein_coding
chr19	3958454	3971143	3958454	3971143	-	transcript1167.chr19.nic@DAPK3	transcript1167.chr19.nic	protein_coding	3971022,3969674,3964631,3964244,3963871,3963643,3961009,3960059,3958454	3971143,3969829,3964991,3964373,3963919,3963669,3961161,3960104,3959637	Gene ID= ENSG00000167657.13 TPM= 231.18 Transcript Type= NA
chr19	3958453	3971070	3958453	3971070	-	ENST00000545797.6@DAPK3	ENST00000545797.6	protein_coding	3970921,3969674,3964631,3964244,3963871,3963643,3961009,3960059,3958453	3971070,3969829,3964991,3964373,3963919,3963669,3961161,3960104,3959637	Gene ID= ENSG00000167657.13 TPM= 26.85 Transcript Type= protein_coding
chr19	3976056	3985469	3976056	3985469	-	ENST00000309311.6@EEF2	ENST00000309311.6	protein_coding	3985378,3984136,3983110,3982807,3982246,3981947,3981339,3980841,3980514,3979808,3979329,3977819,3977428,3977215,3976056	3985469,3984350,3983291,3983018,3982424,3982052,3981452,3980979,3980709,3980066,3979436,3978172,3977610,3977347,3976747	Gene ID= ENSG00000167658.15 TPM= 2365.7 Transcript Type= protein_coding
chr19	4007646	4039386	4007646	4039386	+	ENST00000262971.2@PIAS4	ENST00000262971.2	protein_coding	4007646,4012923,4024036,4028146,4028510,4028720,4028931,4033100,4033420,4037374,4037616	4007787,4013349,4024120,4028187,4028600,4028848,4029036,4033173,4033580,4037504,4039386	Gene ID= ENSG00000105229.6 TPM= 56.04 Transcript Type= protein_coding
chr19	4017682	4021265	4017682	4021265	-	transcript1208.chr19.nnic@NA	transcript1208.chr19.nnic	NA	4017682	4021265	Gene ID= novel_gene_chr19_1209 TPM= 17.51 Transcript Type= NA
chr19	4043950	4045283	4043950	4045283	-	transcript1214.chr19.nnic@NA	transcript1214.chr19.nnic	NA	4043950	4045283	Gene ID= novel_gene_chr19_1215 TPM= 7.01 Transcript Type= NA
chr19	4044673	4046678	4044673	4046678	-	transcript1210.chr19.nnic@NA	transcript1210.chr19.nnic	NA	4044673	4046678	Gene ID= novel_gene_chr19_1211 TPM= 23.35 Transcript Type= NA
chr19	4046344	4047991	4046344	4047991	-	transcript1206.chr19.nnic@NA	transcript1206.chr19.nnic	NA	4046344	4047991	Gene ID= novel_gene_chr19_1207 TPM= 16.35 Transcript Type= NA
chr19	4090321	4124141	4090321	4124141	-	transcript1225.chr19.nic@MAP2K2	transcript1225.chr19.nic	protein_coding	4123784,4117419,4110509,4102376,4101229,4101019,4095388,4094453,4090321	4124141,4117629,4110655,4102453,4101280,4101143,4095449,4094498,4090708	Gene ID= ENSG00000126934.13 TPM= 25.69 Transcript Type= NA
chr19	4090321	4100455	4090321	4100455	-	transcript1229.chr19.nic@MAP2K2	transcript1229.chr19.nic	protein_coding	4099201,4097279,4095388,4094453,4090321	4100455,4097343,4095449,4094498,4090708	Gene ID= ENSG00000126934.13 TPM= 42.03 Transcript Type= NA
chr19	4090324	4100679	4090324	4100679	-	ENST00000600584.5@MAP2K2	ENST00000600584.5	protein_coding	4099201,4097279,4094453,4090324	4100679,4097343,4095449,4090708	Gene ID= ENSG00000126934.13 TPM= 2.34 Transcript Type= retained_intron
chr19	4090321	4124129	4090321	4124129	-	ENST00000262948.9@MAP2K2	ENST00000262948.9	protein_coding	4123784,4117419,4110509,4102376,4101229,4101019,4099201,4097279,4095388,4094453,4090321	4124129,4117629,4110655,4102453,4101280,4101143,4099414,4097343,4095449,4094498,4090708	Gene ID= ENSG00000126934.13 TPM= 272.05 Transcript Type= protein_coding
chr19	4174109	4182604	4174109	4182604	-	ENST00000337491.6@SIRT6	ENST00000337491.6	protein_coding	4182474,4180782,4179104,4177079,4175842,4175680,4175028,4174109	4182604,4180909,4179286,4177138,4175937,4175760,4175151,4174946	Gene ID= ENSG00000077463.14 TPM= 5.84 Transcript Type= protein_coding
chr19	4229498	4237531	4229498	4237531	+	ENST00000221847.5@EBI3	ENST00000221847.5	protein_coding	4229498,4231191,4233129,4234667,4236936	4229617,4231323,4233307,4234824,4237531	Gene ID= ENSG00000105246.5 TPM= 2.34 Transcript Type= protein_coding
chr19	4247079	4269090	4247079	4269090	+	ENST00000262962.11@CCDC94	ENST00000262962.11	protein_coding	4247079,4249228,4251027,4254355,4258242,4261994,4267624,4268584	4247170,4249328,4251171,4254489,4258423,4262114,4267774,4269090	Gene ID= ENSG00000105248.15 TPM= 28.02 Transcript Type= protein_coding
chr19	4292232	4302393	4292232	4302393	-	ENST00000595645.5@TMIGD2	ENST00000595645.5	protein_coding	4302340,4297986,4294775,4294579,4292232	4302393,4298345,4294816,4294680,4292885	Gene ID= ENSG00000167664.8 TPM= 1.17 Transcript Type= protein_coding
chr19	4324043	4338877	4324043	4338877	-	ENST00000594605.5@STAP2	ENST00000594605.5	protein_coding	4338652,4333973,4333694,4332022,4329961,4328675,4327316,4327124,4326942,4325396,4325216,4324455,4324043	4338877,4334044,4333816,4332078,4330061,4328809,4327385,4327226,4327007,4325545,4325308,4324529,4324197	Gene ID= ENSG00000178078.11 TPM= 12.84 Transcript Type= protein_coding
chr19	4324043	4338879	4324043	4338879	-	transcript1250.chr19.nic@STAP2	transcript1250.chr19.nic	protein_coding	4338652,4333973,4333694,4332022,4329961,4328675,4327316,4327124,4326942,4325396,4325216,4324455,4324043	4338879,4334044,4333816,4332078,4330061,4328809,4327385,4327226,4327007,4325545,4325308,4324664,4324197	Gene ID= ENSG00000178078.11 TPM= 3.5 Transcript Type= NA
chr19	4324043	4338879	4324043	4338879	-	transcript1253.chr19.nic@STAP2	transcript1253.chr19.nic	protein_coding	4338652,4333973,4333694,4332022,4329961,4328675,4327316,4327124,4326942,4325396,4325216,4324043	4338879,4334044,4333816,4332078,4330061,4328809,4327385,4327226,4327007,4325545,4325308,4324197	Gene ID= ENSG00000178078.11 TPM= 2.34 Transcript Type= NA
chr19	4324043	4338821	4324043	4338821	-	ENST00000600324.5@STAP2	ENST00000600324.5	protein_coding	4338652,4333973,4333694,4332022,4329961,4328675,4327316,4327124,4326942,4325396,4325216,4324455,4324043	4338821,4334044,4333816,4332078,4330061,4328809,4327385,4327226,4327007,4325545,4325308,4324667,4324197	Gene ID= ENSG00000178078.11 TPM= 5.84 Transcript Type= protein_coding
chr19	4354995	4360079	4354995	4360079	+	transcript1265.chr19.nic@MPND	transcript1265.chr19.nic	protein_coding	4354995,4357253,4357515,4358083,4359163,4359916	4355173,4357421,4357585,4358172,4359255,4360079	Gene ID= ENSG00000008382.15 TPM= 2.34 Transcript Type= NA
chr19	4343559	4360072	4343559	4360072	+	ENST00000599840.5@MPND	ENST00000599840.5	protein_coding	4343559,4343708,4345745,4352897,4354045,4354324,4354949,4355097,4357253,4357515,4358083,4359163,4359916	4343600,4343994,4345981,4353029,4354129,4354420,4355021,4355173,4357421,4357585,4358172,4359255,4360072	Gene ID= ENSG00000008382.15 TPM= 28.02 Transcript Type= protein_coding
chr19	4343554	4360081	4343554	4360081	+	ENST00000359935.8@MPND	ENST00000359935.8	protein_coding	4343554,4343708,4345745,4352897,4354045,4354324,4357253,4357515,4358083,4359163,4359916	4343600,4343994,4345981,4353029,4354129,4354420,4357421,4357585,4358172,4359255,4360081	Gene ID= ENSG00000008382.15 TPM= 3.5 Transcript Type= protein_coding
chr19	4360370	4400587	4360370	4400587	-	transcript1255.chr19.nnic@SH3GL1	transcript1255.chr19.nnic	protein_coding	4400324,4390052,4366926,4366501,4365482,4364088,4363720,4363370,4362612,4362329,4360370	4400587,4390213,4366994,4366573,4365625,4364221,4363878,4363473,4362736,4362385,4361796	Gene ID= ENSG00000141985.9 TPM= 21.6 Transcript Type= NA
chr19	4360370	4400547	4360370	4400547	-	ENST00000269886.7@SH3GL1	ENST00000269886.7	protein_coding	4400324,4366926,4366501,4365482,4364088,4363720,4363370,4362612,4362329,4360370	4400547,4366994,4366573,4365625,4364221,4363878,4363473,4362736,4362385,4361796	Gene ID= ENSG00000141985.9 TPM= 171.05 Transcript Type= protein_coding
chr19	4361480	4364719	4361480	4364719	+	transcript1270.chr19.nnic@NA	transcript1270.chr19.nnic	NA	4361480	4364719	Gene ID= novel_gene_chr19_1271 TPM= 2.34 Transcript Type= NA
chr19	4364918	4366678	4364918	4366678	-	transcript1272.chr19.nnic@NA	transcript1272.chr19.nnic	NA	4364918	4366678	Gene ID= novel_gene_chr19_1273 TPM= 3.5 Transcript Type= NA
chr19	4402662	4443392	4402662	4443392	+	ENST00000301280.9@CHAF1A	ENST00000301280.9	protein_coding	4402662,4405912,4408903,4418020,4422566,4423335,4423806,4428664,4429438,4429708,4430549,4431952,4433070,4442245,4442925	4402814,4405962,4409759,4418076,4422795,4423395,4423874,4428890,4429606,4429788,4430641,4432207,4433539,4442341,4443392	Gene ID= ENSG00000167670.15 TPM= 5.84 Transcript Type= protein_coding
chr19	4445010	4455298	4445010	4455298	-	ENST00000394765.7@UBXN6	ENST00000394765.7	protein_coding	4455221,4453930,4453458,4452364,4448318,4447550,4446836,4446500,4446283,4446049,4445010	4455298,4454093,4453522,4452492,4448415,4447625,4446920,4446719,4446413,4446197,4445623	Gene ID= ENSG00000167671.11 TPM= 12.84 Transcript Type= protein_coding
chr19	4445006	4457822	4445006	4457822	-	ENST00000301281.10@UBXN6	ENST00000301281.10	protein_coding	4457615,4453930,4453458,4452364,4448318,4447550,4446836,4446500,4446283,4446049,4445006	4457822,4454093,4453522,4452492,4448415,4447625,4446920,4446719,4446413,4446197,4445623	Gene ID= ENSG00000167671.11 TPM= 52.54 Transcript Type= protein_coding
chr19	4472244	4502208	4472244	4502208	+	transcript1290.chr19.nic@HDGFL2	transcript1290.chr19.nic	protein_coding	4472244,4475275,4475445,4488676,4491566,4491764,4493703,4493982,4494166,4496302,4497958,4498306,4498814,4499491,4501191	4472422,4475351,4475583,4488876,4491682,4491835,4493862,4494057,4494475,4496405,4498031,4498376,4498915,4499704,4502208	Gene ID= ENSG00000167674.14 TPM= 17.51 Transcript Type= NA
chr19	4523079	4535256	4523079	4535256	-	transcript1304.chr19.nnic@PLIN5	transcript1304.chr19.nnic	protein_coding	4535165,4534015,4531627,4529784,4529073,4525633,4524963,4523079	4535256,4534095,4531751,4529866,4529253,4525832,4525076,4524085	Gene ID= ENSG00000214456.8 TPM= 2.34 Transcript Type= NA
chr19	4522531	4535224	4522531	4535224	-	ENST00000381848.7@PLIN5	ENST00000381848.7	protein_coding	4535165,4534015,4531627,4529784,4529073,4525633,4524963,4522531	4535224,4534095,4531822,4529866,4529253,4525832,4525076,4524085	Gene ID= ENSG00000214456.8 TPM= 16.35 Transcript Type= protein_coding
chr19	4536409	4540474	4536409	4540474	-	ENST00000306390.6@LRG1	ENST00000306390.6	protein_coding	4539982,4536409	4540474,4538951	Gene ID= ENSG00000171236.9 TPM= 10.51 Transcript Type= protein_coding
chr19	4542593	4559808	4542593	4559808	-	ENST00000586582.5@SEMA6B	ENST00000586582.5	protein_coding	4559530,4558337,4558026,4557163,4556951,4555988,4555474,4554976,4554388,4552422,4550799,4550123,4548263,4548027,4546392,4546216,4542593	4559808,4558489,4558149,4557223,4557013,4556089,4555564,4555095,4554476,4552639,4550930,4550272,4548445,4548173,4546469,4546274,4544529	Gene ID= ENSG00000167680.15 TPM= 19.85 Transcript Type= protein_coding
chr19	4639480	4655520	4639480	4655520	+	transcript1317.chr19.nnic@TNFAIP8L1	transcript1317.chr19.nnic	protein_coding	4639480,4651867,4654553	4639629,4653090,4655520	Gene ID= ENSG00000185361.8 TPM= 7.01 Transcript Type= NA
chr19	4639537	4642482	4639537	4642482	+	ENST00000598107.1@TNFAIP8L1	ENST00000598107.1	protein_coding	4639537	4642482	Gene ID= ENSG00000185361.8 TPM= 2.34 Transcript Type= processed_transcript
chr19	4657545	4670370	4657545	4670370	-	ENST00000262947.7@MYDGF	ENST00000262947.7	protein_coding	4670161,4668595,4664876,4660669,4659931,4657545	4670370,4668645,4664937,4660750,4660003,4658084	Gene ID= ENSG00000074842.7 TPM= 309.41 Transcript Type= protein_coding
chr19	4675340	4717918	4675340	4717918	-	transcript1329.chr19.nic@DPP9	transcript1329.chr19.nic	protein_coding	4717615,4714081,4705858,4704131,4703886,4702603,4702027,4700216,4697551,4695378,4694661,4690878,4689570,4688757,4685626,4684663,4683477,4682696,4679835,4675340	4717918,4714337,4705970,4704304,4704054,4702716,4702155,4700277,4697651,4695555,4694823,4690957,4689722,4688892,4685771,4684809,4683629,4682838,4679946,4676656	Gene ID= ENSG00000142002.16 TPM= 4.09 Transcript Type= NA
chr19	4675226	4723863	4675226	4723863	-	ENST00000262960.13@DPP9	ENST00000262960.13	protein_coding	4723674,4722499,4719851,4714081,4705858,4704131,4703886,4702603,4702027,4700216,4697551,4695378,4694661,4690878,4689570,4688757,4685626,4684663,4683477,4682696,4679835,4675226	4723863,4722551,4719941,4714337,4705970,4704304,4704054,4702716,4702155,4700277,4697651,4695555,4694823,4690957,4689722,4688892,4685771,4684809,4683629,4682838,4679946,4676656	Gene ID= ENSG00000142002.16 TPM= 71.81 Transcript Type= protein_coding
chr19	4694317	4723750	4694317	4723750	-	ENST00000597849.5@DPP9	ENST00000597849.5	protein_coding	4723674,4722499,4719851,4714081,4705858,4704131,4703886,4702603,4702027,4700216,4697551,4695378,4694317	4723750,4722551,4719941,4714337,4705970,4704304,4704054,4702716,4702155,4700277,4697651,4695555,4694823	Gene ID= ENSG00000142002.16 TPM= 2.34 Transcript Type= protein_coding
chr19	4791714	4795557	4791714	4795557	+	transcript1338.chr19.nnic@NA	transcript1338.chr19.nnic	NA	4791714	4795557	Gene ID= novel_gene_chr19_1339 TPM= 109.75 Transcript Type= NA
chr19	4815932	4831704	4815932	4831704	-	ENST00000248244.5@TICAM1	ENST00000248244.5	protein_coding	4831614,4815932	4831704,4818516	Gene ID= ENSG00000127666.9 TPM= 26.85 Transcript Type= protein_coding
chr19	4838341	4867768	4838341	4867768	-	ENST00000221957.8@PLIN3	ENST00000221957.8	protein_coding	4867609,4861329,4859826,4859590,4852016,4847691,4844668,4838341	4867768,4861411,4860024,4859672,4852301,4847890,4844793,4839536	Gene ID= ENSG00000105355.8 TPM= 114.42 Transcript Type= protein_coding
chr19	4909430	4962150	4909430	4962150	+	ENST00000620565.4@UHRF1	ENST00000620565.4	protein_coding	4909430,4910876,4929222,4930716,4932741,4941528,4941745,4944132,4944343,4945861,4947105,4950611,4950859,4954350,4954650,4956709,4960657	4909655,4911038,4929476,4930876,4932956,4941628,4941931,4944255,4944450,4945965,4947211,4950773,4950996,4954488,4954822,4956813,4962150	Gene ID= ENSG00000276043.4 TPM= 2.34 Transcript Type= protein_coding
chr19	4909498	4962151	4909498	4962151	+	ENST00000624301.3@UHRF1	ENST00000624301.3	protein_coding	4909498,4910876,4929222,4930716,4932741,4941528,4941745,4944132,4944343,4945861,4947105,4950611,4950859,4954350,4954650,4956709,4960657	4909655,4911038,4929476,4930876,4932956,4941628,4941931,4944255,4944450,4945965,4947211,4950773,4950996,4954488,4954822,4956813,4962151	Gene ID= ENSG00000276043.4 TPM= 3.5 Transcript Type= protein_coding
chr19	4969113	5153595	4969113	5153595	+	ENST00000611640.4@KDM4B	ENST00000611640.4	protein_coding	4969113,5016257,5032866,5039836,5041137,5047476,5071010,5077367,5082367,5110622,5119118,5119653,5131076,5131887,5133883,5135339,5137262,5137621,5137962,5143967,5144248,5144783,5150358,5151335	4969230,5016339,5033031,5040011,5041251,5047669,5071059,5077470,5082504,5110818,5119219,5119852,5131545,5132007,5134061,5135561,5137338,5137676,5138070,5144152,5144412,5144902,5150450,5153595	Gene ID= ENSG00000127663.14 TPM= 27.44 Transcript Type= protein_coding
chr19	4969111	5079168	4969111	5079168	+	transcript1357.chr19.nic@KDM4B	transcript1357.chr19.nic	protein_coding	4969111,5016257,5032866,5039836,5041137,5047476,5071010,5077367	4969230,5016339,5033031,5040011,5041251,5047669,5071059,5079168	Gene ID= ENSG00000127663.14 TPM= 4.67 Transcript Type= NA
chr19	4969111	5042515	4969111	5042515	+	transcript1360.chr19.nic@KDM4B	transcript1360.chr19.nic	protein_coding	4969111,5016257,5032866,5039836	4969230,5016339,5033031,5042515	Gene ID= ENSG00000127663.14 TPM= 5.84 Transcript Type= NA
chr19	4969121	5153595	4969121	5153595	+	ENST00000159111.8@KDM4B	ENST00000159111.8	protein_coding	4969121,5016257,5032866,5039836,5041137,5047476,5071010,5077367,5082367,5110622,5119653,5131076,5131887,5133883,5135339,5137262,5137621,5137962,5143967,5144248,5144783,5150358,5151335	4969230,5016339,5033031,5040011,5041251,5047669,5071059,5077470,5082504,5110818,5119852,5131545,5132007,5134061,5135561,5137338,5137676,5138070,5144152,5144412,5144902,5150450,5153595	Gene ID= ENSG00000127663.14 TPM= 29.77 Transcript Type= protein_coding
chr19	5023760	5026102	5023760	5026102	-	transcript1361.chr19.nnic@NA	transcript1361.chr19.nnic	NA	5023760	5026102	Gene ID= novel_gene_chr19_1362 TPM= 14.01 Transcript Type= NA
chr19	5062777	5064850	5062777	5064850	-	transcript1363.chr19.nnic@NA	transcript1363.chr19.nnic	NA	5062777	5064850	Gene ID= novel_gene_chr19_1364 TPM= 8.17 Transcript Type= NA
chr19	5234944	5246192	5234944	5246192	-	transcript1368.chr19.nnic@PTPRS	transcript1368.chr19.nnic	protein_coding	5245776,5243901,5240199,5234944	5246192,5244484,5240334,5239063	Gene ID= ENSG00000105426.16 TPM= 5.84 Transcript Type= NA
chr19	5215659	5218212	5215659	5218212	+	transcript1369.chr19.nnic@NA	transcript1369.chr19.nnic	NA	5215659	5218212	Gene ID= novel_gene_chr19_1370 TPM= 3.5 Transcript Type= NA
chr19	5558167	5568034	5558167	5568034	-	ENST00000448587.5@TINCR	ENST00000448587.5	protein_coding	5567665,5562082,5558167	5568034,5562211,5561399	Gene ID= ENSG00000223573.6 TPM= 10.51 Transcript Type= protein_coding
chr19	5586998	5590967	5586998	5590967	-	transcript1384.chr19.nnic@NA	transcript1384.chr19.nnic	NA	5586998	5590967	Gene ID= novel_gene_chr19_1385 TPM= 3.5 Transcript Type= NA
chr19	5586999	5622980	5586999	5622980	-	ENST00000252542.8@SAFB2	ENST00000252542.8	protein_coding	5622530,5621309,5616422,5616132,5613465,5612540,5611120,5610639,5609995,5604787,5604583,5600130,5598793,5595361,5593891,5592747,5591748,5590278,5587868,5587701,5586999	5622980,5621396,5616486,5616335,5613527,5612567,5611630,5610688,5610095,5604936,5604695,5600260,5598884,5595497,5594178,5592887,5591793,5590408,5587980,5587767,5587399	Gene ID= ENSG00000130254.11 TPM= 32.69 Transcript Type= protein_coding
chr19	5623070	5668478	5623070	5668478	+	transcript1393.chr19.nic@SAFB	transcript1393.chr19.nic	protein_coding	5623070,5626405,5641594,5641740,5645337,5648016,5649926,5650978,5653115,5653338,5654061,5654368,5657241,5661518,5664022,5664397,5667046,5667347,5667820,5668162	5623394,5626489,5641658,5641946,5645399,5648043,5649975,5651072,5653264,5653420,5654200,5654456,5657347,5661808,5664159,5664439,5667164,5667450,5667886,5668478	Gene ID= ENSG00000160633.12 TPM= 10.51 Transcript Type= NA
chr19	5623118	5668466	5623118	5668466	+	ENST00000592224.5@SAFB	ENST00000592224.5	protein_coding	5623118,5626405,5641594,5641740,5645337,5648016,5648989,5649926,5650978,5653115,5653338,5654061,5654368,5657241,5661521,5664022,5664397,5667046,5667347,5667820,5668162	5623394,5626489,5641658,5641946,5645399,5648043,5649499,5649975,5651072,5653264,5653420,5654200,5654456,5657347,5661808,5664159,5664439,5667164,5667450,5667886,5668466	Gene ID= ENSG00000160633.12 TPM= 132.32 Transcript Type= protein_coding
chr19	5678422	5680896	5678422	5680896	-	ENST00000309324.8@C19orf70	ENST00000309324.8	protein_coding	5680458,5679586,5679345,5678422	5680896,5679763,5679396,5678648	Gene ID= ENSG00000174917.8 TPM= 63.05 Transcript Type= protein_coding
chr19	5678915	5680488	5678915	5680488	-	ENST00000587589.1@C19orf70	ENST00000587589.1	protein_coding	5680458,5679586,5679345,5678915	5680488,5679763,5679396,5679230	Gene ID= ENSG00000174917.8 TPM= 1.17 Transcript Type= protein_coding
chr19	5681009	5688522	5681009	5688522	+	ENST00000581893.5@HSD11B1L	ENST00000581893.5	protein_coding	5681009,5684965,5686900,5687282,5687503,5687753	5681271,5685119,5686991,5687375,5687668,5688522	Gene ID= ENSG00000167733.13 TPM= 1.75 Transcript Type= protein_coding
chr19	5681048	5685589	5681048	5685589	+	ENST00000422535.6@HSD11B1L	ENST00000422535.6	protein_coding	5681048,5684819,5684989,5685302	5681271,5684905,5685119,5685589	Gene ID= ENSG00000167733.13 TPM= 1.17 Transcript Type= protein_coding
chr19	5681064	5688522	5681064	5688522	+	ENST00000339423.6@HSD11B1L	ENST00000339423.6	protein_coding	5681064,5684819,5684989,5686416,5686900,5687282,5687503,5687753	5681271,5684905,5685119,5686527,5686991,5687375,5687668,5688522	Gene ID= ENSG00000167733.13 TPM= 4.09 Transcript Type= protein_coding
chr19	5690196	5691876	5690196	5691876	+	ENST00000347512.7@RPL36	ENST00000347512.7	protein_coding	5690196,5690506,5691319,5691532	5690327,5690600,5691453,5691876	Gene ID= ENSG00000130255.12 TPM= 286.06 Transcript Type= protein_coding
chr19	5690306	5691653	5690306	5691653	+	ENST00000579446.1@RPL36	ENST00000579446.1	protein_coding	5690306,5690506,5691319	5690327,5690600,5691653	Gene ID= ENSG00000130255.12 TPM= 1.17 Transcript Type= protein_coding
chr19	5690316	5691667	5690316	5691667	+	ENST00000394580.2@RPL36	ENST00000394580.2	protein_coding	5690316,5691319,5691532	5690600,5691453,5691667	Gene ID= ENSG00000130255.12 TPM= 26.27 Transcript Type= protein_coding
chr19	5691834	5720290	5691834	5720290	-	ENST00000360614.7@LONP1	ENST00000360614.7	protein_coding	5719704,5714183,5713134,5711771,5708342,5707697,5707060,5705772,5700789,5699027,5696670,5696249,5696054,5694761,5694387,5693552,5693298,5691834	5720290,5714271,5713253,5712002,5708403,5707826,5707143,5705992,5700927,5699205,5696757,5696371,5696170,5694901,5694552,5693769,5693462,5692208	Gene ID= ENSG00000196365.11 TPM= 260.96 Transcript Type= protein_coding
chr19	5702549	5705173	5702549	5705173	+	transcript1442.chr19.nnic@NA	transcript1442.chr19.nnic	NA	5702549	5705173	Gene ID= novel_gene_chr19_1443 TPM= 4.67 Transcript Type= NA
chr19	5785140	5791238	5785140	5791238	-	ENST00000309061.11@DUS3L	ENST00000309061.11	protein_coding	5791044,5790047,5789207,5788357,5788024,5787589,5787296,5787061,5786749,5786467,5785603,5785383,5785140	5791238,5790335,5789719,5788398,5788176,5787705,5787361,5787171,5786845,5786542,5785791,5785511,5785275	Gene ID= ENSG00000141994.15 TPM= 42.03 Transcript Type= protein_coding
chr19	5785140	5791173	5785140	5791173	-	transcript1447.chr19.nic@DUS3L	transcript1447.chr19.nic	protein_coding	5791044,5790047,5789207,5788357,5788024,5787589,5787296,5787061,5786749,5786467,5785603,5785383,5785140	5791173,5790335,5789719,5788398,5788176,5787705,5787361,5787171,5786919,5786542,5785791,5785511,5785275	Gene ID= ENSG00000141994.15 TPM= 3.5 Transcript Type= NA
chr19	5785140	5791173	5785140	5791173	-	transcript1450.chr19.nic@DUS3L	transcript1450.chr19.nic	protein_coding	5791044,5790047,5789207,5788357,5788024,5787589,5787296,5786749,5786467,5785603,5785383,5785140	5791173,5790335,5789719,5788398,5788176,5787705,5787361,5787171,5786542,5785791,5785511,5785275	Gene ID= ENSG00000141994.15 TPM= 2.34 Transcript Type= NA
chr19	5785140	5791171	5785140	5791171	-	transcript1451.chr19.nic@DUS3L	transcript1451.chr19.nic	protein_coding	5791044,5790047,5789207,5788357,5788024,5787589,5787296,5787061,5786467,5785603,5785383,5785140	5791171,5790335,5789719,5788398,5788176,5787705,5787361,5787171,5786542,5785791,5785511,5785275	Gene ID= ENSG00000141994.15 TPM= 2.34 Transcript Type= NA
chr19	5785138	5791227	5785138	5791227	-	transcript1453.chr19.nic@DUS3L	transcript1453.chr19.nic	protein_coding	5791044,5790047,5789207,5788357,5788024,5787589,5787296,5787061,5786467,5785603,5785138	5791227,5790335,5789719,5788398,5788176,5787705,5787361,5787171,5786542,5785791,5785511	Gene ID= ENSG00000141994.15 TPM= 2.34 Transcript Type= NA
chr19	5785140	5791210	5785140	5791210	-	ENST00000589085.5@DUS3L	ENST00000589085.5	protein_coding	5791044,5790043,5789207,5788357,5788024,5787589,5787296,5786749,5786467,5785603,5785383,5785140	5791210,5790335,5789716,5788398,5788176,5787705,5787361,5787171,5786542,5785791,5785511,5785275	Gene ID= ENSG00000141994.15 TPM= 4.67 Transcript Type= retained_intron
chr19	5805024	5828324	5805024	5828324	+	transcript1458.chr19.nnic@NRTN	transcript1458.chr19.nnic	protein_coding	5805024,5823768,5827749	5805451,5824334,5828324	Gene ID= ENSG00000171119.2 TPM= 15.18 Transcript Type= NA
chr19	5842891	5851471	5842891	5851471	-	ENST00000589918.5@FUT3	ENST00000589918.5	protein_coding	5851390,5846426,5842891	5851471,5846564,5844851	Gene ID= ENSG00000171124.12 TPM= 8.17 Transcript Type= protein_coding
chr19	5842891	5851474	5842891	5851474	-	ENST00000589620.5@FUT3	ENST00000589620.5	protein_coding	5851390,5846426,5842891	5851474,5846618,5844851	Gene ID= ENSG00000171124.12 TPM= 11.68 Transcript Type= protein_coding
chr19	5842888	5851449	5842888	5851449	-	ENST00000458379.6@FUT3	ENST00000458379.6	protein_coding	5851390,5842888	5851449,5844851	Gene ID= ENSG00000171124.12 TPM= 3.5 Transcript Type= protein_coding
chr19	5894677	5903754	5894677	5903754	-	ENST00000593233.1@NDUFA11	ENST00000593233.1	protein_coding	5903612,5901335,5896905,5896453,5894677	5903754,5901454,5896997,5896575,5894854	Gene ID= ENSG00000174886.12 TPM= 11.68 Transcript Type= nonsense_mediated_decay
chr19	5894677	5903756	5894677	5903756	-	ENST00000308961.4@NDUFA11	ENST00000308961.4	protein_coding	5903612,5896905,5896453,5894677	5903756,5896997,5896575,5894854	Gene ID= ENSG00000174886.12 TPM= 96.91 Transcript Type= protein_coding
chr19	5894675	5903771	5894675	5903771	-	ENST00000592634.5@NDUFA11	ENST00000592634.5	protein_coding	5903612,5896905,5894675	5903771,5896997,5896575	Gene ID= ENSG00000174886.12 TPM= 19.85 Transcript Type= protein_coding
chr19	5904847	5909860	5904847	5909860	+	transcript1479.chr19.nnic@AC104532.1	transcript1479.chr19.nnic	protein_coding	5904847,5908824	5905120,5909860	Gene ID= ENSG00000267314.1 TPM= 2.34 Transcript Type= NA
chr19	5904858	5910853	5904858	5910853	+	ENST00000339485.3@VMAC	ENST00000339485.3	protein_coding	5904858,5908824	5905081,5910853	Gene ID= ENSG00000187650.3 TPM= 1.17 Transcript Type= protein_coding
chr19	5911707	5915877	5911707	5915877	+	ENST00000588776.6@CAPS	ENST00000588776.6	protein_coding	5911707,5914385,5914563,5914940,5915221	5914309,5914489,5914740,5915146,5915877	Gene ID= ENSG00000105519.15 TPM= 9.34 Transcript Type= protein_coding
chr19	5916139	5978140	5916139	5978140	-	ENST00000340578.10@RANBP3	ENST00000340578.10	protein_coding	5978061,5957918,5951393,5941799,5941621,5933414,5932452,5931404,5927968,5925634,5924827,5923812,5923194,5921201,5918496,5917794,5916139	5978140,5957973,5951596,5941835,5941707,5933479,5932544,5931531,5928087,5925737,5924905,5923914,5923303,5921321,5918638,5917980,5917653	Gene ID= ENSG00000031823.14 TPM= 8.17 Transcript Type= protein_coding
chr19	5917352	5978086	5917352	5978086	-	ENST00000034275.12@RANBP3	ENST00000034275.12	protein_coding	5978061,5957918,5941799,5941621,5933414,5932452,5931404,5927968,5925634,5924827,5923812,5923194,5921201,5918496,5917794,5917352	5978086,5957973,5941835,5941707,5933479,5932544,5931531,5928087,5925737,5924905,5923914,5923303,5921321,5918638,5917980,5917653	Gene ID= ENSG00000031823.14 TPM= 5.84 Transcript Type= protein_coding
chr19	5917323	5978093	5917323	5978093	-	ENST00000591092.5@RANBP3	ENST00000591092.5	protein_coding	5978061,5957918,5941799,5941621,5933414,5932452,5931419,5927968,5925634,5924827,5923812,5923194,5921201,5918496,5917794,5917323	5978093,5957973,5941835,5941707,5933479,5932544,5931531,5928087,5925737,5924905,5923914,5923303,5921321,5918638,5917980,5917653	Gene ID= ENSG00000031823.14 TPM= 5.84 Transcript Type= protein_coding
chr19	5932874	5937082	5932874	5937082	+	transcript1502.chr19.nnic@NA	transcript1502.chr19.nnic	NA	5932874	5937082	Gene ID= novel_gene_chr19_1503 TPM= 35.03 Transcript Type= NA
chr19	6212465	6218616	6212465	6218616	-	transcript1519.chr19.nic@MLLT1	transcript1519.chr19.nic	protein_coding	6217954,6216405,6213939,6213726,6213337,6212465	6218616,6216513,6214038,6213797,6213408,6213170	Gene ID= ENSG00000130382.8 TPM= 2.34 Transcript Type= NA
chr19	6210379	6279948	6210379	6279948	-	ENST00000252674.8@MLLT1	ENST00000252674.8	protein_coding	6279773,6270579,6262228,6230570,6226977,6222121,6217954,6216405,6213939,6213726,6213337,6210379	6279948,6270759,6262310,6230713,6227102,6222684,6218041,6216513,6214038,6213797,6213408,6213170	Gene ID= ENSG00000130382.8 TPM= 209 Transcript Type= protein_coding
chr19	6361452	6368908	6361452	6368908	+	ENST00000245816.8@CLPP	ENST00000245816.8	protein_coding	6361452,6361869,6362446,6364452,6366258,6368538	6361772,6361940,6362542,6364639,6366363,6368908	Gene ID= ENSG00000125656.8 TPM= 64.22 Transcript Type= protein_coding
chr19	6372433	6375251	6372433	6375251	+	ENST00000245812.7@ALKBH7	ENST00000245812.7	protein_coding	6372433,6374203,6374465,6374811	6373024,6374376,6374589,6375251	Gene ID= ENSG00000125652.7 TPM= 61.88 Transcript Type= protein_coding
chr19	6372731	6375031	6372731	6375031	+	transcript1537.chr19.nic@ALKBH7	transcript1537.chr19.nic	protein_coding	6372731,6374203,6374465	6373024,6374376,6375031	Gene ID= ENSG00000125652.7 TPM= 3.5 Transcript Type= NA
chr19	6375148	6393464	6375148	6393464	-	transcript1525.chr19.nnic@GTF2F1	transcript1525.chr19.nnic	protein_coding	6392984,6392857,6391902,6389444,6387389,6383311,6381697,6381554,6381359,6381122,6380904,6380573,6380285,6375148	6393464,6392903,6391974,6389637,6387559,6383495,6381850,6381615,6381478,6381195,6381042,6380690,6380485,6375616	Gene ID= ENSG00000125651.13 TPM= 5.25 Transcript Type= NA
chr19	6379569	6393460	6379569	6393460	-	ENST00000394456.9@GTF2F1	ENST00000394456.9	protein_coding	6392984,6392857,6391902,6389444,6387389,6383311,6381697,6381554,6381359,6381122,6380904,6380573,6379569	6393460,6392903,6391974,6389637,6387559,6383495,6381850,6381615,6381478,6381195,6381042,6380690,6380485	Gene ID= ENSG00000125651.13 TPM= 90.49 Transcript Type= protein_coding
chr19	6413641	6424822	6413641	6424822	-	transcript1545.chr19.nnic@KHSRP	transcript1545.chr19.nnic	protein_coding	6424682,6424453,6422340,6421650,6421278,6420422,6420073,6419203,6418702,6418483,6417981,6417739,6416987,6416738,6416490,6416298,6415808,6415534,6415380,6413641	6424822,6424549,6422436,6421688,6421317,6420471,6420144,6419260,6418876,6418581,6418079,6417841,6417087,6416882,6416650,6416407,6415896,6415734,6415457,6415301	Gene ID= ENSG00000088247.17 TPM= 30.36 Transcript Type= NA
chr19	6436081	6459803	6436081	6459803	-	transcript1551.chr19.nic@SLC25A23	transcript1551.chr19.nic	protein_coding	6459473,6458198,6457503,6456420,6454559,6454323,6453981,6452312,6444151,6438724,6438447,6436081	6459803,6458324,6457590,6456531,6454717,6454475,6454088,6452479,6444301,6438821,6438534,6436464	Gene ID= ENSG00000125648.14 TPM= 2.34 Transcript Type= NA
chr19	6436081	6459803	6436081	6459803	-	transcript1557.chr19.nic@SLC25A23	transcript1557.chr19.nic	protein_coding	6459473,6458198,6457503,6456420,6454559,6454323,6453981,6452312,6444151,6438447,6436081	6459803,6458324,6457590,6456531,6454717,6454475,6454088,6452479,6444301,6438534,6436464	Gene ID= ENSG00000125648.14 TPM= 2.34 Transcript Type= NA
chr19	6436079	6459803	6436079	6459803	-	transcript1561.chr19.nic@SLC25A23	transcript1561.chr19.nic	protein_coding	6459473,6458198,6457503,6456420,6454559,6454323,6453981,6452312,6444151,6436079	6459803,6458324,6457590,6456531,6454717,6454475,6454088,6452479,6444301,6436464	Gene ID= ENSG00000125648.14 TPM= 4.67 Transcript Type= NA
chr19	6440064	6459803	6440064	6459803	-	transcript1566.chr19.nic@SLC25A23	transcript1566.chr19.nic	protein_coding	6459473,6458198,6457503,6456420,6454559,6454323,6453981,6444151,6440064	6459803,6458324,6457590,6456531,6454717,6454475,6454088,6444301,6442159	Gene ID= ENSG00000125648.14 TPM= 5.84 Transcript Type= NA
chr19	6443562	6459803	6443562	6459803	-	transcript1568.chr19.nic@SLC25A23	transcript1568.chr19.nic	protein_coding	6459473,6458198,6457503,6456420,6454559,6454323,6453981,6452312,6443562	6459803,6458324,6457590,6456531,6454717,6454475,6454088,6452479,6444301	Gene ID= ENSG00000125648.14 TPM= 4.67 Transcript Type= NA
chr19	6440064	6459735	6440064	6459735	-	ENST00000301454.8@SLC25A23	ENST00000301454.8	protein_coding	6459473,6458198,6457503,6456420,6454559,6454323,6453981,6452312,6444151,6440064	6459735,6458324,6457590,6456531,6454717,6454475,6454088,6452479,6444301,6442159	Gene ID= ENSG00000125648.14 TPM= 40.87 Transcript Type= protein_coding
chr19	6464283	6467221	6464283	6467221	+	ENST00000356762.7@CRB3	ENST00000356762.7	protein_coding	6464283,6464608,6465545,6466466,6466951	6464350,6464783,6465618,6466609,6467221	Gene ID= ENSG00000130545.15 TPM= 18.1 Transcript Type= protein_coding
chr19	6464279	6467221	6464279	6467221	+	ENST00000600229.5@CRB3	ENST00000600229.5	protein_coding	6464279,6464608,6465545,6466466	6464350,6464783,6465618,6467221	Gene ID= ENSG00000130545.15 TPM= 2.92 Transcript Type= protein_coding
chr19	6467207	6481808	6467207	6481808	-	ENST00000381480.6@DENND1C	ENST00000381480.6	protein_coding	6481679,6479987,6479859,6479669,6478937,6478783,6477378,6477218,6477074,6476857,6475837,6475706,6475484,6475274,6472889,6471406,6471265,6470295,6469596,6468846,6468578,6468234,6467207	6481808,6480051,6479902,6479718,6479056,6478852,6477458,6477283,6477127,6476967,6475937,6475751,6475585,6475399,6472993,6471496,6471305,6470366,6469640,6468953,6468645,6468441,6468118	Gene ID= ENSG00000205744.9 TPM= 8.17 Transcript Type= protein_coding
chr19	6494319	6502584	6494319	6502584	-	ENST00000264071.6@TUBB4A	ENST00000264071.6	protein_coding	6502156,6501515,6501287,6494319	6502584,6501623,6501397,6496221	Gene ID= ENSG00000104833.11 TPM= 1.17 Transcript Type= protein_coding
chr19	6530999	6535928	6530999	6535928	+	ENST00000245817.4@TNFSF9	ENST00000245817.4	protein_coding	6530999,6532786,6534600	6531303,6532816,6535928	Gene ID= ENSG00000125657.4 TPM= 7.01 Transcript Type= protein_coding
chr19	6661253	6670117	6661253	6670117	-	ENST00000245912.7@TNFSF14	ENST00000245912.7	protein_coding	6669959,6667413,6667113,6661253	6670117,6667449,6667154,6665350	Gene ID= ENSG00000125735.10 TPM= 1.17 Transcript Type= protein_coding
chr19	6664555	6670588	6664555	6670588	-	ENST00000599359.1@TNFSF14	ENST00000599359.1	protein_coding	6670296,6669851,6667413,6667113,6664555	6670588,6670158,6667449,6667154,6665350	Gene ID= ENSG00000125735.10 TPM= 2.34 Transcript Type= protein_coding
chr19	6677835	6720687	6677835	6720687	-	transcript1590.chr19.nnic@C3	transcript1590.chr19.nnic	protein_coding	6720516,6719211,6718247,6718094,6714352,6714166,6713992,6713407,6713189,6712508,6712257,6710987,6710639,6709684,6707800,6707466,6707076,6702471,6702127,6697652,6697344,6696593,6696379,6694431,6693412,6692924,6686746,6686124,6684988,6684775,6684560,6684388,6682142,6681941,6680158,6679407,6679125,6678372,6678152,6677835	6720687,6719403,6718412,6718164,6714446,6714248,6714082,6713509,6713315,6712623,6712406,6711196,6710845,6709842,6707929,6707537,6707273,6702579,6702212,6697794,6697556,6696659,6696465,6694634,6693487,6693083,6686902,6686287,6685146,6684834,6684650,6684439,6682229,6682030,6680263,6679496,6679208,6678455,6678287,6678023	Gene ID= ENSG00000125730.16 TPM= 121.43 Transcript Type= NA
chr19	6730055	6737640	6730055	6737640	-	transcript1604.chr19.nic@GPR108	transcript1604.chr19.nic	protein_coding	6737457,6736592,6735908,6735622,6734183,6734005,6733845,6733570,6733168,6732987,6732476,6732263,6732025,6731891,6731473,6731199,6730987,6730055	6737640,6736711,6735958,6735704,6734307,6734054,6733913,6733674,6733301,6733062,6732549,6732380,6732155,6731934,6731522,6731282,6731054,6730384	Gene ID= ENSG00000125734.15 TPM= 7.01 Transcript Type= NA
chr19	6729914	6737603	6729914	6737603	-	ENST00000264080.11@GPR108	ENST00000264080.11	protein_coding	6737457,6736592,6735908,6735622,6734183,6734005,6733845,6733570,6733168,6732987,6732476,6732263,6732025,6731891,6731473,6731199,6730987,6729914	6737603,6736711,6735958,6735704,6734307,6734054,6733913,6733674,6733301,6733062,6732549,6732380,6732155,6731934,6731522,6731282,6731111,6730384	Gene ID= ENSG00000125734.15 TPM= 3.5 Transcript Type= protein_coding
chr19	6730098	6737560	6730098	6737560	-	ENST00000597706.5@GPR108	ENST00000597706.5	protein_coding	6737457,6736592,6735908,6735622,6734183,6734005,6733845,6733570,6733168,6732987,6732472,6732263,6732025,6731891,6731473,6731199,6730987,6730098	6737560,6736711,6735958,6735704,6734307,6734054,6733913,6733674,6733301,6733062,6732549,6732380,6732155,6731934,6731522,6731282,6731111,6730384	Gene ID= ENSG00000125734.15 TPM= 122.6 Transcript Type= nonsense_mediated_decay
chr19	6730086	6737260	6730086	6737260	-	ENST00000430424.8@GPR108	ENST00000430424.8	protein_coding	6736990,6736592,6735908,6735622,6734183,6734005,6733845,6733570,6733168,6732987,6732476,6732263,6732025,6731891,6731473,6731199,6730987,6730086	6737260,6736711,6735958,6735704,6734307,6734054,6733913,6733674,6733301,6733062,6732549,6732380,6732155,6731934,6731522,6731282,6731111,6730384	Gene ID= ENSG00000125734.15 TPM= 4.67 Transcript Type= protein_coding
chr19	6739676	6751509	6739676	6751509	+	transcript1620.chr19.nic@TRIP10	transcript1620.chr19.nic	protein_coding	6739676,6741010,6741225,6742967,6743194,6743494,6743708,6744554,6744800,6746178,6746452,6749934,6750292,6750512,6751063	6739785,6741125,6741281,6743114,6743256,6743598,6743836,6744700,6744994,6746196,6746561,6750066,6750431,6750633,6751509	Gene ID= ENSG00000125733.17 TPM= 11.77 Transcript Type= NA
chr19	6739680	6751526	6739680	6751526	+	ENST00000313285.12@TRIP10	ENST00000313285.12	protein_coding	6739680,6741010,6741225,6742967,6743194,6743494,6743708,6744554,6744800,6746452,6749934,6750292,6750512,6751063	6739785,6741125,6741281,6743114,6743256,6743598,6743836,6744700,6744994,6746561,6750066,6750431,6750633,6751526	Gene ID= ENSG00000125733.17 TPM= 119.19 Transcript Type= protein_coding
chr19	6739676	6751509	6739676	6751509	+	transcript1629.chr19.nic@TRIP10	transcript1629.chr19.nic	protein_coding	6739676,6741010,6742967,6743194,6743494,6743708,6744554,6744800,6746452,6749934,6750292,6750512,6751063	6739785,6741281,6743114,6743256,6743598,6743836,6744700,6744994,6746561,6750066,6750431,6750633,6751509	Gene ID= ENSG00000125733.17 TPM= 5.64 Transcript Type= NA
chr19	6739727	6751523	6739727	6751523	+	ENST00000313244.13@TRIP10	ENST00000313244.13	protein_coding	6739727,6741010,6741225,6742967,6743194,6743494,6743708,6744554,6744800,6746029,6746452,6749934,6750292,6750512,6751063	6739785,6741125,6741281,6743114,6743256,6743598,6743836,6744700,6744994,6746196,6746561,6750066,6750431,6750633,6751523	Gene ID= ENSG00000125733.17 TPM= 21.99 Transcript Type= protein_coding
chr19	6739714	6751509	6739714	6751509	+	ENST00000600677.5@TRIP10	ENST00000600677.5	protein_coding	6739714,6741010,6741225,6742967,6743194,6743494,6743708,6744554,6744800,6746178,6746433,6749934,6750292,6750512,6751063	6739785,6741125,6741281,6743114,6743256,6743598,6743836,6744700,6744994,6746196,6746561,6750066,6750431,6750633,6751509	Gene ID= ENSG00000125733.17 TPM= 11.77 Transcript Type= nonsense_mediated_decay
chr19	6739762	6751464	6739762	6751464	+	ENST00000596758.5@TRIP10	ENST00000596758.5	protein_coding	6739762,6741010,6741225,6742967,6743194,6743494,6743708,6744554,6744800,6746452,6749934,6750292,6750512,6751034	6739785,6741125,6741281,6743114,6743256,6743598,6743836,6744700,6744994,6746561,6750066,6750431,6750633,6751464	Gene ID= ENSG00000125733.17 TPM= 2.34 Transcript Type= protein_coding
chr19	6752165	6767504	6752165	6767504	-	transcript1637.chr19.nnic@SH2D3A	transcript1637.chr19.nnic	protein_coding	6767387,6763680,6760638,6759594,6754831,6754616,6754251,6754052,6753456,6752165	6767504,6763816,6760987,6759670,6754932,6754731,6754448,6754163,6753641,6752753	Gene ID= ENSG00000125731.12 TPM= 7.01 Transcript Type= NA
chr19	6752165	6767504	6752165	6767504	-	transcript1640.chr19.nnic@SH2D3A	transcript1640.chr19.nnic	protein_coding	6767387,6763680,6759594,6754831,6754616,6754251,6754052,6753456,6752165	6767504,6763816,6759670,6754932,6754731,6754448,6754163,6753641,6752753	Gene ID= ENSG00000125731.12 TPM= 5.84 Transcript Type= NA
chr19	6752165	6767504	6752165	6767504	-	transcript1641.chr19.nic@SH2D3A	transcript1641.chr19.nic	protein_coding	6767387,6763680,6760638,6759594,6754831,6754251,6754052,6753456,6752165	6767504,6763816,6760987,6759670,6754932,6754731,6754163,6753641,6752753	Gene ID= ENSG00000125731.12 TPM= 3.5 Transcript Type= NA
chr19	6772705	6857360	6772705	6857360	+	transcript1648.chr19.nnic@VAV1	transcript1648.chr19.nnic	protein_coding	6772705,6820702,6821622,6821791,6822221,6822419,6825053,6825303,6826612,6828076,6828419,6828622,6828815,6829786,6832091,6833184,6833528,6833711,6833908,6836432,6836985,6843135,6847998,6850670,6853947,6857054	6773011,6820818,6821680,6821859,6822329,6822514,6825121,6825406,6826711,6828171,6828487,6828708,6828900,6829918,6832200,6833285,6833625,6833733,6833953,6836568,6837050,6843166,6848114,6850757,6854098,6857360	Gene ID= ENSG00000141968.7 TPM= 2.34 Transcript Type= NA
chr19	6772728	6857360	6772728	6857360	+	ENST00000596764.5@VAV1	ENST00000596764.5	protein_coding	6772728,6820702,6821622,6821791,6822221,6825053,6825303,6826612,6828076,6828419,6828622,6828815,6829786,6832091,6833184,6833528,6833711,6833908,6836432,6836985,6843135,6847998,6850670,6852965,6853947,6857054	6773011,6820818,6821680,6821859,6822329,6825121,6825406,6826711,6828171,6828487,6828708,6828900,6829918,6832200,6833285,6833625,6833733,6833953,6836568,6837050,6843166,6848114,6850757,6853079,6854098,6857360	Gene ID= ENSG00000141968.7 TPM= 3.5 Transcript Type= protein_coding
chr19	7069444	7084218	7069444	7084218	+	ENST00000252840.10@ZNF557	ENST00000252840.10	protein_coding	7069444,7070562,7074996,7075655,7076381,7081360,7081970,7082878	7069773,7070653,7075105,7075743,7076507,7081455,7082052,7084218	Gene ID= ENSG00000130544.11 TPM= 3.5 Transcript Type= protein_coding
chr19	7069705	7087968	7069705	7087968	+	ENST00000414706.2@ZNF557	ENST00000414706.2	protein_coding	7069705,7070562,7074996,7075676,7076381,7081360,7081970,7082878	7069773,7070653,7075105,7075743,7076507,7081455,7082052,7087968	Gene ID= ENSG00000130544.11 TPM= 2.34 Transcript Type= protein_coding
chr19	7266384	7294329	7266384	7294329	-	transcript1666.chr19.nic@INSR	transcript1666.chr19.nic	protein_coding	7293792,7266384	7294329,7267896	Gene ID= ENSG00000171105.13 TPM= 3.5 Transcript Type= NA
chr19	7395113	7472477	7395113	7472477	+	ENST00000319670.13@ARHGEF18	ENST00000319670.13	protein_coding	7395113,7440344,7441653,7441912,7444204,7447043,7451149,7453467,7456327,7458512,7459903,7462152,7463818,7464560,7466918,7467071,7467214,7468825,7469904,7470126,7470537	7395247,7440482,7441765,7442052,7444454,7447168,7451266,7453715,7456403,7458690,7459994,7462334,7463955,7464690,7466974,7467118,7467684,7469131,7470029,7470315,7472477	Gene ID= ENSG00000104880.17 TPM= 28.99 Transcript Type= protein_coding
chr19	7395120	7472477	7395120	7472477	+	transcript1669.chr19.nic@ARHGEF18	transcript1669.chr19.nic	protein_coding	7395120,7440344,7441653,7441912,7444204,7447043,7451149,7453467,7456327,7458512,7459903,7462152,7463818,7464560,7466918,7467071,7467214,7468825,7469904,7470126	7395247,7440482,7441765,7442052,7444454,7447168,7451266,7453715,7456403,7458690,7459994,7462334,7463955,7464690,7466974,7467118,7467684,7469131,7470029,7472477	Gene ID= ENSG00000104880.17 TPM= 67.52 Transcript Type= NA
chr19	7395121	7472477	7395121	7472477	+	transcript1670.chr19.nic@ARHGEF18	transcript1670.chr19.nic	protein_coding	7395121,7440189,7441653,7441912,7444204,7447043,7451149,7453467,7456327,7458512,7459903,7462152,7463818,7464560,7466918,7467071,7467214,7468825,7469904,7470126	7395247,7440482,7441765,7442052,7444454,7447168,7451266,7453715,7456403,7458690,7459994,7462334,7463955,7464690,7466974,7467118,7467684,7469131,7470029,7472477	Gene ID= ENSG00000104880.17 TPM= 57.6 Transcript Type= NA
chr19	7395120	7396723	7395120	7396723	+	transcript1678.chr19.nnic@NA	transcript1678.chr19.nnic	NA	7395120	7396723	Gene ID= novel_gene_chr19_1679 TPM= 2.34 Transcript Type= NA
chr19	7399775	7403349	7399775	7403349	-	transcript1680.chr19.nnic@NA	transcript1680.chr19.nnic	NA	7399775	7403349	Gene ID= novel_gene_chr19_1681 TPM= 4.67 Transcript Type= NA
chr19	7416607	7419226	7416607	7419226	-	transcript1682.chr19.nnic@NA	transcript1682.chr19.nnic	NA	7416607	7419226	Gene ID= novel_gene_chr19_1683 TPM= 2.34 Transcript Type= NA
chr19	7476875	7489036	7476875	7489036	-	transcript1674.chr19.nnic@PEX11G	transcript1674.chr19.nnic	protein_coding	7488951,7485838,7482033,7476875	7489036,7486026,7482211,7477436	Gene ID= ENSG00000104883.7 TPM= 2.34 Transcript Type= NA
chr19	7476875	7489019	7476875	7489019	-	ENST00000221480.5@PEX11G	ENST00000221480.5	protein_coding	7488951,7485838,7482033,7478314,7476875	7489019,7486026,7482211,7478376,7477436	Gene ID= ENSG00000104883.7 TPM= 10.51 Transcript Type= protein_coding
chr19	7506795	7508447	7506795	7508447	+	ENST00000601292.1@TEX45	ENST00000601292.1	protein_coding	7506795,7508206	7507141,7508447	Gene ID= ENSG00000198723.10 TPM= 1.17 Transcript Type= retained_intron
chr19	7516118	7521026	7516118	7521026	+	ENST00000597229.1@ZNF358	ENST00000597229.1	protein_coding	7516118,7519205	7516249,7521026	Gene ID= ENSG00000198816.6 TPM= 126.1 Transcript Type= protein_coding
chr19	7522598	7533990	7522598	7533990	+	transcript1712.chr19.nic@MCOLN1	transcript1712.chr19.nic	protein_coding	7522598,7524961,7526439,7526761,7527520,7527864,7528158,7528597,7528821,7529101,7529590,7530435,7533523,7533759	7522781,7525166,7526606,7526926,7527628,7527960,7528257,7528703,7528970,7529202,7529712,7530501,7533653,7533990	Gene ID= ENSG00000090674.15 TPM= 8.17 Transcript Type= NA
chr19	7522598	7533990	7522598	7533990	+	transcript1718.chr19.nic@MCOLN1	transcript1718.chr19.nic	protein_coding	7522598,7524961,7526439,7526761,7527864,7528158,7528597,7528821,7529101,7529590,7530286,7533523,7533759	7522781,7525166,7526606,7526926,7527960,7528257,7528703,7528970,7529202,7529712,7530501,7533653,7533990	Gene ID= ENSG00000090674.15 TPM= 4.67 Transcript Type= NA
chr19	7522598	7533990	7522598	7533990	+	transcript1723.chr19.nic@MCOLN1	transcript1723.chr19.nic	protein_coding	7522598,7524961,7526439,7526761,7528158,7528597,7528821,7529101,7529590,7530286,7533523,7533759	7522781,7525166,7526606,7527960,7528257,7528703,7528970,7529202,7529712,7530501,7533653,7533990	Gene ID= ENSG00000090674.15 TPM= 4.67 Transcript Type= NA
chr19	7522626	7534009	7522626	7534009	+	ENST00000264079.10@MCOLN1	ENST00000264079.10	protein_coding	7522626,7524961,7526439,7526761,7527520,7527864,7528158,7528597,7528821,7529101,7529590,7530286,7533523,7533759	7522781,7525166,7526606,7526926,7527628,7527960,7528257,7528703,7528970,7529202,7529712,7530501,7533653,7534009	Gene ID= ENSG00000090674.15 TPM= 148.28 Transcript Type= protein_coding
chr19	7522671	7533990	7522671	7533990	+	ENST00000394321.9@MCOLN1	ENST00000394321.9	protein_coding	7522671,7524961,7526439,7526761,7527520,7528158,7528597,7528821,7529101,7529590,7530286,7533523,7533759	7522781,7525166,7526606,7526926,7527960,7528257,7528703,7528970,7529202,7529712,7530501,7533653,7533990	Gene ID= ENSG00000090674.15 TPM= 10.51 Transcript Type= retained_intron
chr19	7532732	7535874	7532732	7535874	-	transcript1734.chr19.nnic@NA	transcript1734.chr19.nnic	NA	7532732	7535874	Gene ID= novel_gene_chr19_1735 TPM= 3.5 Transcript Type= NA
chr19	7534004	7561764	7534004	7561764	+	ENST00000221249.10@PNPLA6	ENST00000221249.10	protein_coding	7534004,7534750,7535509,7535933,7536191,7536449,7539918,7540149,7540630,7540923,7541354,7541522,7541984,7542561,7542761,7543007,7549907,7550298,7550517,7550994,7551362,7553872,7554209,7554555,7554893,7555249,7555607,7556453,7556655,7557168,7558850,7560648,7561014,7561208,7561488	7534239,7534902,7535577,7536020,7536273,7536546,7540058,7540308,7540710,7541051,7541434,7541684,7542067,7542670,7542928,7543084,7550112,7550429,7550640,7551107,7551437,7554015,7554272,7554723,7555075,7555367,7555763,7556569,7556724,7557284,7559151,7560764,7561110,7561317,7561764	Gene ID= ENSG00000032444.15 TPM= 34.97 Transcript Type= protein_coding
chr19	7535695	7561764	7535695	7561764	+	transcript1695.chr19.nic@PNPLA6	transcript1695.chr19.nic	protein_coding	7535695,7536191,7536449,7539918,7540149,7540630,7540923,7541354,7541522,7541984,7542561,7542761,7543007,7549907,7550298,7550517,7550994,7551362,7553872,7554209,7554555,7554893,7555249,7555607,7556453,7556655,7557168,7558850,7560648,7561014,7561208,7561488	7536020,7536273,7536546,7540058,7540308,7540710,7541051,7541434,7541684,7542067,7542670,7542928,7543084,7550112,7550429,7550640,7551107,7551437,7554015,7554272,7554723,7555075,7555367,7555763,7556569,7556724,7557284,7559151,7560764,7561110,7561317,7561764	Gene ID= ENSG00000032444.15 TPM= 57.45 Transcript Type= NA
chr19	7595836	7618304	7595836	7618304	+	transcript1736.chr19.nnic@CAMSAP3	transcript1736.chr19.nnic	protein_coding	7595836,7605226,7606271,7606476,7606777,7608126,7610476,7610700,7610877,7611095,7611517,7611687,7613145,7615183,7615418,7616523,7617326,7617543,7617752	7596150,7605479,7606393,7606571,7606809,7608264,7610615,7610793,7610931,7611168,7611586,7612752,7613163,7615322,7615719,7616622,7617438,7617661,7618304	Gene ID= ENSG00000076826.9 TPM= 9.73 Transcript Type= NA
chr19	7595836	7618304	7595836	7618304	+	transcript1741.chr19.nnic@CAMSAP3	transcript1741.chr19.nnic	protein_coding	7595836,7605226,7606271,7606476,7608126,7610476,7610700,7610877,7611095,7611517,7611687,7613145,7615183,7615418,7616523,7617326,7617543,7617752	7596150,7605479,7606393,7606571,7608264,7610615,7610793,7610931,7611168,7611586,7612752,7613163,7615322,7615719,7616622,7617438,7617661,7618304	Gene ID= ENSG00000076826.9 TPM= 12.65 Transcript Type= NA
chr19	7595836	7618304	7595836	7618304	+	transcript1744.chr19.nnic@CAMSAP3	transcript1744.chr19.nnic	protein_coding	7595836,7605226,7606271,7606476,7608126,7610476,7610700,7610877,7611095,7611517,7611738,7615183,7615418,7616523,7617326,7617543,7617752	7596150,7605479,7606393,7606571,7608264,7610615,7610793,7610931,7611168,7611586,7613163,7615322,7615719,7616622,7617438,7617661,7618304	Gene ID= ENSG00000076826.9 TPM= 37.16 Transcript Type= NA
chr19	7619525	7629565	7619525	7629565	-	ENST00000358368.4@XAB2	ENST00000358368.4	protein_coding	7629477,7628150,7627728,7627243,7626136,7625880,7624301,7623731,7623170,7622762,7622530,7622331,7621135,7620846,7620547,7620275,7619946,7619747,7619525	7629565,7628298,7627851,7627440,7626270,7626044,7624445,7623882,7623289,7622893,7622661,7622444,7621297,7621036,7620669,7620446,7620075,7619856,7619647	Gene ID= ENSG00000076924.11 TPM= 51.37 Transcript Type= protein_coding
chr19	7629696	7631620	7629696	7631620	+	transcript1750.chr19.nic@PET100	transcript1750.chr19.nic	protein_coding	7629696,7630573,7630823,7631232	7629860,7630659,7630846,7631620	Gene ID= ENSG00000229833.9 TPM= 15.18 Transcript Type= NA
chr19	7629809	7631623	7629809	7631623	+	ENST00000623154.1@PET100	ENST00000623154.1	protein_coding	7629809	7631623	Gene ID= ENSG00000229833.9 TPM= 2.34 Transcript Type= TEC
chr19	7629839	7631624	7629839	7631624	+	ENST00000598540.6@PET100	ENST00000598540.6	protein_coding	7629839,7630573,7630823,7631232,7631473	7629860,7630659,7630846,7631321,7631624	Gene ID= ENSG00000229833.9 TPM= 8.17 Transcript Type= nonsense_mediated_decay
chr19	7631611	7637002	7631611	7637002	-	transcript1752.chr19.nnic@PCP2	transcript1752.chr19.nnic	protein_coding	7636406,7632716,7632393,7631611	7637002,7632830,7632517,7631808	Gene ID= ENSG00000174788.9 TPM= 2.34 Transcript Type= NA
chr19	7637087	7647873	7637087	7647873	+	transcript1770.chr19.nic@STXBP2	transcript1770.chr19.nic	protein_coding	7637087,7638726,7639019,7639731,7640731,7640900,7641705,7642034,7642203,7642429,7642766,7642983,7643165,7644614,7645197,7646249,7647162,7647725	7637186,7638775,7639100,7639807,7640809,7641003,7641853,7642118,7642333,7642536,7642823,7643048,7643245,7644752,7645306,7646344,7647511,7647873	Gene ID= ENSG00000076944.15 TPM= 13.71 Transcript Type= NA
chr19	7637087	7647873	7637087	7647873	+	transcript1780.chr19.nic@STXBP2	transcript1780.chr19.nic	protein_coding	7637087,7638726,7639019,7639731,7640731,7640900,7641705,7642034,7642203,7642429,7642766,7642983,7643165,7644614,7645197,7646249,7647162	7637186,7638775,7639100,7639807,7640809,7641003,7641853,7642118,7642333,7642536,7642823,7643048,7643245,7644752,7645306,7646344,7647873	Gene ID= ENSG00000076944.15 TPM= 9.47 Transcript Type= NA
chr19	7637127	7647873	7637127	7647873	+	ENST00000414284.6@STXBP2	ENST00000414284.6	protein_coding	7637127,7638726,7639019,7639731,7640740,7640900,7641705,7642034,7642203,7642429,7642766,7642983,7643165,7644614,7645197,7646249,7647162,7647354,7647725	7637186,7638775,7639100,7639807,7640809,7641003,7641853,7642118,7642333,7642536,7642823,7643048,7643245,7644752,7645306,7646344,7647247,7647511,7647873	Gene ID= ENSG00000076944.15 TPM= 12.11 Transcript Type= protein_coding
chr19	7637113	7647872	7637113	7647872	+	ENST00000441779.6@STXBP2	ENST00000441779.6	protein_coding	7637113,7638726,7639019,7639731,7640698,7640900,7641705,7642034,7642203,7642429,7642766,7642983,7643165,7644614,7645197,7646249,7647162,7647354,7647725	7637186,7638775,7639100,7639807,7640809,7641003,7641853,7642118,7642333,7642536,7642823,7643048,7643245,7644752,7645306,7646344,7647247,7647511,7647872	Gene ID= ENSG00000076944.15 TPM= 5.53 Transcript Type= protein_coding
chr19	7637124	7638617	7637124	7638617	+	transcript1789.chr19.nnic@NA	transcript1789.chr19.nnic	NA	7637124	7638617	Gene ID= novel_gene_chr19_1790 TPM= 2.34 Transcript Type= NA
chr19	7669044	7670454	7669044	7670454	+	ENST00000221515.5@RETN	ENST00000221515.5	protein_coding	7669044,7669317,7669821,7670219	7669121,7669444,7669898,7670454	Gene ID= ENSG00000104918.7 TPM= 15.18 Transcript Type= protein_coding
chr19	7676628	7679826	7676628	7679826	+	ENST00000333598.7@MCEMP1	ENST00000333598.7	protein_coding	7676628,7677637,7678104,7678350,7678491,7678924,7679098	7677175,7677726,7678241,7678400,7678604,7678983,7679826	Gene ID= ENSG00000183019.7 TPM= 444.85 Transcript Type= protein_coding
chr19	7677088	7682854	7677088	7682854	+	transcript1796.chr19.nic@MCEMP1	transcript1796.chr19.nic	protein_coding	7677088,7677637,7678104,7678350,7678491,7678924,7682242	7677175,7677726,7678241,7678400,7678604,7678983,7682854	Gene ID= ENSG00000183019.7 TPM= 26.85 Transcript Type= NA
chr19	7680879	7682858	7680879	7682858	+	ENST00000426877.2@TRAPPC5	ENST00000426877.2	protein_coding	7680879,7682242	7681026,7682858	Gene ID= ENSG00000181029.8 TPM= 16.93 Transcript Type= protein_coding
chr19	7680875	7682856	7680875	7682856	+	ENST00000317378.5@TRAPPC5	ENST00000317378.5	protein_coding	7680875,7682242	7681049,7682856	Gene ID= ENSG00000181029.8 TPM= 14.59 Transcript Type= protein_coding
chr19	7739994	7747534	7739994	7747534	-	ENST00000315599.11@CD209	ENST00000315599.11	protein_coding	7747466,7747306,7746460,7745518,7744941,7744107,7739994	7747534,7747365,7746531,7746087,7745092,7744219,7743240	Gene ID= ENSG00000090659.17 TPM= 4.67 Transcript Type= protein_coding
chr19	7763149	7769605	7763149	7769605	+	ENST00000327325.9@CLEC4M	ENST00000327325.9	protein_coding	7763149,7763393,7765185,7765638,7766656,7767516,7768838	7763312,7763476,7765268,7766207,7766807,7767628,7769605	Gene ID= ENSG00000104938.16 TPM= 2.34 Transcript Type= protein_coding
chr19	7763217	7769604	7763217	7769604	+	ENST00000596363.5@CLEC4M	ENST00000596363.5	protein_coding	7763217,7765185,7765638,7766656,7768838	7763312,7765268,7766207,7766807,7769604	Gene ID= ENSG00000104938.16 TPM= 1.17 Transcript Type= protein_coding
chr19	7830176	7864976	7830176	7864976	+	transcript1819.chr19.nic@EVI5L	transcript1819.chr19.nic	protein_coding	7830176,7846496,7847732,7848921,7849256,7849997,7851434,7851681,7853086,7853273,7856015,7857092,7858191,7860561,7861878,7862122,7862388,7862972,7863185,7863424	7830381,7846679,7847921,7849145,7849330,7850122,7851577,7851770,7853183,7853333,7856068,7857124,7858331,7860689,7862018,7862277,7862534,7863067,7863280,7864976	Gene ID= ENSG00000142459.8 TPM= 12.84 Transcript Type= NA
chr19	7830244	7864973	7830244	7864973	+	transcript1821.chr19.nic@EVI5L	transcript1821.chr19.nic	protein_coding	7830244,7846496,7847732,7848921,7849256,7849997,7851434,7851681,7853086,7853273,7856015,7857092,7858191,7860561,7861878,7862122,7862388,7862972,7863185	7830381,7846679,7847921,7849145,7849330,7850122,7851577,7851770,7853183,7853333,7856068,7857124,7858331,7860689,7862018,7862277,7862534,7863067,7864973	Gene ID= ENSG00000142459.8 TPM= 2.92 Transcript Type= NA
chr19	7830176	7864973	7830176	7864973	+	transcript1824.chr19.nic@EVI5L	transcript1824.chr19.nic	protein_coding	7830176,7846496,7847732,7848921,7849256,7849997,7851434,7851681,7853086,7853273,7856015,7858191,7860561,7861878,7862122,7862388,7862972,7863185	7830381,7846679,7847921,7849145,7849330,7850122,7851577,7851770,7853183,7853333,7856068,7858331,7860689,7862018,7862277,7862534,7863067,7864973	Gene ID= ENSG00000142459.8 TPM= 9.92 Transcript Type= NA
chr19	7856585	7864976	7856585	7864976	+	transcript1829.chr19.nic@EVI5L	transcript1829.chr19.nic	protein_coding	7856585,7860561,7861878,7862122,7862388,7862972,7863185,7863424	7858331,7860689,7862018,7862277,7862534,7863067,7863280,7864976	Gene ID= ENSG00000142459.8 TPM= 2.34 Transcript Type= NA
chr19	7830233	7864976	7830233	7864976	+	ENST00000270530.8@EVI5L	ENST00000270530.8	protein_coding	7830233,7846496,7847732,7848921,7849256,7849997,7851434,7851681,7853086,7853273,7856015,7858191,7860561,7861878,7862122,7862388,7862972,7863185,7863424	7830381,7846679,7847921,7849145,7849330,7850122,7851577,7851770,7853183,7853333,7856068,7858331,7860689,7862018,7862277,7862534,7863067,7863280,7864976	Gene ID= ENSG00000142459.8 TPM= 31.53 Transcript Type= protein_coding
chr19	7868719	7874379	7868719	7874379	-	ENST00000618550.4@PRR36	ENST00000618550.4	protein_coding	7874286,7873419,7873197,7872849,7869715,7868719	7874379,7873696,7873299,7872961,7872756,7869544	Gene ID= ENSG00000183248.11 TPM= 2.34 Transcript Type= protein_coding
chr19	7888505	7902016	7888505	7902016	+	ENST00000306708.10@LRRC8E	ENST00000306708.10	protein_coding	7888505,7895599,7898661	7888600,7895741,7902016	Gene ID= ENSG00000171017.10 TPM= 15.18 Transcript Type= protein_coding
chr19	7903891	7914478	7903891	7914478	+	ENST00000397979.3@MAP2K7	ENST00000397979.3	protein_coding	7903891,7909755,7910063,7910260,7910453,7910696,7910980,7911250,7911436,7912149,7912297	7904068,7909896,7910129,7910373,7910572,7910803,7911159,7911330,7911578,7912194,7914478	Gene ID= ENSG00000076984.17 TPM= 39.7 Transcript Type= protein_coding
chr19	7917004	7919090	7917004	7919090	+	transcript1835.chr19.nnic@TGFBR3L	transcript1835.chr19.nnic	protein_coding	7917004,7917473,7917701,7918057,7918917	7917034,7917599,7917859,7918129,7919090	Gene ID= ENSG00000260001.6 TPM= 2.34 Transcript Type= NA
chr19	7920316	7923250	7920316	7923250	+	ENST00000221573.10@SNAPC2	ENST00000221573.10	protein_coding	7920316,7921423,7921705,7922035,7922445	7920549,7921542,7921773,7922347,7923250	Gene ID= ENSG00000104976.11 TPM= 21.6 Transcript Type= protein_coding
chr19	7921015	7923250	7921015	7923250	+	ENST00000597584.5@SNAPC2	ENST00000597584.5	protein_coding	7921015,7921423,7921705,7922035,7922445	7921119,7921542,7921773,7922347,7923250	Gene ID= ENSG00000104976.11 TPM= 16.93 Transcript Type= protein_coding
chr19	7924485	7926166	7924485	7926166	-	ENST00000318978.5@CTXN1	ENST00000318978.5	protein_coding	7925967,7924485	7926166,7925558	Gene ID= ENSG00000178531.5 TPM= 3.5 Transcript Type= protein_coding
chr19	7926717	7929498	7926717	7929498	-	transcript1860.chr19.nnic@NA	transcript1860.chr19.nnic	NA	7926717	7929498	Gene ID= novel_gene_chr19_1861 TPM= 10.51 Transcript Type= NA
chr19	7926721	7943662	7926721	7943662	-	transcript1849.chr19.nic@TIMM44	transcript1849.chr19.nic	protein_coding	7943607,7941102,7938027,7935065,7934089,7933485,7932840,7931138,7928077,7927657,7926721	7943662,7941197,7938197,7935145,7934238,7934003,7932932,7932751,7928166,7927767,7927306	Gene ID= ENSG00000104980.7 TPM= 3.5 Transcript Type= NA
chr19	7926740	7943920	7926740	7943920	-	ENST00000270538.7@TIMM44	ENST00000270538.7	protein_coding	7943607,7941102,7938027,7935065,7934089,7933864,7933485,7932840,7932627,7931138,7928077,7927657,7926740	7943920,7941197,7938197,7935145,7934238,7934003,7933570,7932932,7932751,7931188,7928166,7927767,7927306	Gene ID= ENSG00000104980.7 TPM= 2.34 Transcript Type= protein_coding
chr19	7926721	7928948	7926721	7928948	-	transcript1858.chr19.nic@TIMM44	transcript1858.chr19.nic	protein_coding	7927657,7926721	7928948,7927306	Gene ID= ENSG00000104980.7 TPM= 4.67 Transcript Type= NA
chr19	7962273	8005618	7962273	8005618	-	transcript1865.chr19.nnic@ELAVL1	transcript1865.chr19.nnic	protein_coding	8005592,8005495,7991644,7981083,7973725,7967565,7962273	8005618,8005552,7991831,7981186,7973878,7967790,7963807	Gene ID= ENSG00000066044.14 TPM= 10.22 Transcript Type= NA
chr19	7962273	8006015	7962273	8006015	-	transcript1875.chr19.nnic@ELAVL1	transcript1875.chr19.nnic	protein_coding	8005495,7991644,7981083,7973725,7962273	8006015,7991831,7981186,7973878,7963807	Gene ID= ENSG00000066044.14 TPM= 6.71 Transcript Type= NA
chr19	8131812	8145700	8131812	8145700	-	transcript1879.chr19.nnic@FBN3	transcript1879.chr19.nnic	protein_coding	8144877,8141940,8141717,8138412,8138134,8135961,8131812	8145700,8142139,8141844,8138566,8138323,8136529,8133106	Gene ID= ENSG00000142449.12 TPM= 2.34 Transcript Type= NA
chr19	8209371	8262421	8209371	8262421	+	transcript1884.chr19.nnic@CERS4	transcript1884.chr19.nnic	protein_coding	8209371,8210706,8241341,8251076,8254499,8255607,8255822,8256236,8256618,8256949,8257879,8261688,8261930	8209494,8210862,8241457,8251249,8254616,8255725,8255879,8256286,8256710,8257077,8257985,8261844,8262421	Gene ID= ENSG00000090661.11 TPM= 3.63 Transcript Type= NA
chr19	8209307	8262421	8209307	8262421	+	transcript1887.chr19.nnic@CERS4	transcript1887.chr19.nnic	protein_coding	8209307,8210706,8247445,8251076,8254499,8255607,8255822,8256236,8256618,8256949,8257879,8261688,8261930	8209494,8210862,8247562,8251249,8254616,8255725,8255879,8256286,8256710,8257077,8257985,8261844,8262421	Gene ID= ENSG00000090661.11 TPM= 16.47 Transcript Type= NA
chr19	8209307	8262421	8209307	8262421	+	transcript1894.chr19.nic@CERS4	transcript1894.chr19.nic	protein_coding	8209307,8210706,8251044,8254499,8255607,8255822,8256236,8256618,8256949,8257879,8261688,8261930	8209494,8210862,8251249,8254616,8255725,8255879,8256286,8256710,8257077,8257985,8261844,8262421	Gene ID= ENSG00000090661.11 TPM= 15.31 Transcript Type= NA
chr19	8209308	8262421	8209308	8262421	+	transcript1901.chr19.nnic@CERS4	transcript1901.chr19.nnic	protein_coding	8209308,8247445,8251076,8254499,8255607,8255822,8256236,8256618,8256949,8257879,8261688,8261930	8209494,8247562,8251249,8254616,8255725,8255879,8256286,8256710,8257077,8257985,8261844,8262421	Gene ID= ENSG00000090661.11 TPM= 5.97 Transcript Type= NA
chr19	8209307	8262421	8209307	8262421	+	transcript1908.chr19.nic@CERS4	transcript1908.chr19.nic	protein_coding	8209307,8210706,8254499,8255607,8255822,8256236,8256618,8256949,8257879,8261688,8261930	8209494,8210862,8254616,8255725,8255879,8256286,8256710,8257077,8257985,8261844,8262421	Gene ID= ENSG00000090661.11 TPM= 4.67 Transcript Type= NA
chr19	8209356	8262421	8209356	8262421	+	ENST00000559450.5@CERS4	ENST00000559450.5	protein_coding	8209356,8251076,8254499,8255607,8255822,8256236,8256618,8256949,8257879,8261688,8261930	8209494,8251249,8254616,8255725,8255879,8256286,8256710,8257077,8257985,8261844,8262421	Gene ID= ENSG00000090661.11 TPM= 5.97 Transcript Type= protein_coding
chr19	8209353	8262421	8209353	8262421	+	ENST00000251363.9@CERS4	ENST00000251363.9	protein_coding	8209353,8210706,8251076,8254499,8255607,8255822,8256236,8256618,8256949,8257879,8261688,8261930	8209494,8210862,8251249,8254616,8255725,8255879,8256286,8256710,8257077,8257985,8261844,8262421	Gene ID= ENSG00000090661.11 TPM= 31.65 Transcript Type= protein_coding
chr19	8302127	8308355	8302127	8308355	-	ENST00000301458.9@CD320	ENST00000301458.9	protein_coding	8308149,8305031,8303855,8302777,8302127	8308355,8305156,8304088,8302980,8302605	Gene ID= ENSG00000167775.10 TPM= 197.32 Transcript Type= protein_coding
chr19	8311284	8321396	8311284	8321396	-	ENST00000301457.2@NDUFA7	ENST00000301457.2	protein_coding	8321308,8320857,8316496,8311284	8321396,8320906,8316645,8311595	Gene ID= ENSG00000267855.5 TPM= 33.86 Transcript Type= protein_coding
chr19	8311366	8321353	8311366	8321353	-	transcript1923.chr19.nic@NDUFA7	transcript1923.chr19.nic	protein_coding	8320857,8316496,8311366	8321353,8316645,8311595	Gene ID= ENSG00000267855.5 TPM= 2.34 Transcript Type= NA
chr19	8321500	8323340	8321500	8323340	+	ENST00000600659.2@RPS28	ENST00000600659.2	protein_coding	8321500,8321656,8321953,8322272	8321569,8321703,8322091,8323340	Gene ID= ENSG00000233927.4 TPM= 732.67 Transcript Type= protein_coding
chr19	8321158	8322946	8321158	8322946	+	ENST00000449223.3@RPS28	ENST00000449223.3	protein_coding	8321158,8321656,8322272	8321569,8322091,8322946	Gene ID= ENSG00000233927.4 TPM= 21.6 Transcript Type= retained_intron
chr19	8322584	8343264	8322584	8343264	-	transcript1963.chr19.nic@KANK3	transcript1963.chr19.nic	protein_coding	8343225,8337795,8334500,8333910,8333724,8333014,8324951,8324630,8324449,8322584	8343264,8337856,8335792,8334419,8333808,8333230,8325096,8324830,8324547,8322922	Gene ID= ENSG00000186994.11 TPM= 41.25 Transcript Type= NA
chr19	8322584	8343262	8322584	8343262	-	ENST00000330915.7@KANK3	ENST00000330915.7	protein_coding	8343225,8337795,8334500,8334320,8333910,8333724,8333014,8324951,8324630,8324449,8322584	8343262,8337856,8335792,8334419,8334116,8333808,8333230,8325096,8324830,8324547,8322922	Gene ID= ENSG00000186994.11 TPM= 587.58 Transcript Type= protein_coding
chr19	8323315	8343262	8323315	8343262	-	ENST00000593649.5@KANK3	ENST00000593649.5	protein_coding	8343225,8337795,8334500,8334320,8333910,8333724,8333014,8324951,8324630,8324449,8323315	8343262,8337856,8335792,8334419,8334116,8333808,8333230,8325096,8324830,8324547,8323538	Gene ID= ENSG00000186994.11 TPM= 24.8 Transcript Type= protein_coding
chr19	8364155	8374362	8364155	8374362	+	transcript2000.chr19.nnic@ANGPTL4	transcript2000.chr19.nnic	protein_coding	8364155,8365954,8366202,8369219,8371056,8371241,8373651	8364639,8366064,8366319,8369332,8371151,8371522,8374362	Gene ID= ENSG00000167772.11 TPM= 2.34 Transcript Type= NA
chr19	8364151	8374373	8364151	8374373	+	ENST00000301455.6@ANGPTL4	ENST00000301455.6	protein_coding	8364151,8365954,8366202,8369219,8371056,8371241,8373705	8364639,8366064,8366319,8369332,8371151,8371522,8374373	Gene ID= ENSG00000167772.11 TPM= 22.18 Transcript Type= protein_coding
chr19	8364169	8374331	8364169	8374331	+	ENST00000393962.6@ANGPTL4	ENST00000393962.6	protein_coding	8364169,8365954,8366202,8371056,8371241,8373705	8364639,8366064,8366319,8371151,8371522,8374331	Gene ID= ENSG00000167772.11 TPM= 2.34 Transcript Type= protein_coding
chr19	8374379	8390685	8374379	8390685	-	ENST00000593581.5@RAB11B-AS1	ENST00000593581.5	antisense_RNA	8390009,8376962,8374379	8390685,8377067,8374608	Gene ID= ENSG00000269386.5 TPM= 5.84 Transcript Type= antisense_RNA
chr19	8390199	8404434	8390199	8404434	+	ENST00000328024.10@RAB11B	ENST00000328024.10	protein_coding	8390199,8399863,8402086,8402485,8403413	8390456,8400058,8402279,8402565,8404434	Gene ID= ENSG00000185236.11 TPM= 206.66 Transcript Type= protein_coding
chr19	8413278	8439017	8413278	8439017	+	transcript2006.chr19.nic@MARCH2	transcript2006.chr19.nic	protein_coding	8413278,8418537,8421789,8426609,8430658,8438388	8413420,8418807,8422016,8426804,8430867,8439017	Gene ID= ENSG00000099785.10 TPM= 34.71 Transcript Type= NA
chr19	8413301	8439017	8413301	8439017	+	transcript2009.chr19.nic@MARCH2	transcript2009.chr19.nic	protein_coding	8413301,8418742,8421789,8426609,8430658,8438388	8413420,8418807,8422016,8426804,8430867,8439017	Gene ID= ENSG00000099785.10 TPM= 5.52 Transcript Type= NA
chr19	8413270	8439004	8413270	8439004	+	ENST00000381035.8@MARCH2	ENST00000381035.8	protein_coding	8413270,8421789,8426609,8438388	8413420,8422016,8426804,8439004	Gene ID= ENSG00000099785.10 TPM= 1.55 Transcript Type= protein_coding
chr19	8413303	8439011	8413303	8439011	+	ENST00000215555.6@MARCH2	ENST00000215555.6	protein_coding	8413303,8421789,8426609,8430658,8438388	8413420,8422016,8426804,8430867,8439011	Gene ID= ENSG00000099785.10 TPM= 34.71 Transcript Type= protein_coding
chr19	8418405	8439017	8418405	8439017	+	ENST00000602117.1@MARCH2	ENST00000602117.1	protein_coding	8418405,8421789,8426609,8430658,8438388	8418807,8422016,8426804,8430867,8439017	Gene ID= ENSG00000099785.10 TPM= 7.86 Transcript Type= protein_coding
chr19	8413294	8415408	8413294	8415408	+	transcript2037.chr19.nnic@NA	transcript2037.chr19.nnic	NA	8413294	8415408	Gene ID= novel_gene_chr19_2038 TPM= 2.34 Transcript Type= NA
chr19	8444767	8489114	8444767	8489114	+	ENST00000348943.7@HNRNPM	ENST00000348943.7	protein_coding	8444767,8455405,8462529,8463497,8463593,8465324,8465480,8466235,8467535,8468774,8471326,8473664,8474167,8483158,8485603,8487024,8488691	8445111,8455574,8462581,8463504,8463686,8465362,8465515,8466388,8467584,8468834,8471427,8473708,8474244,8483211,8486405,8487075,8489114	Gene ID= ENSG00000099783.11 TPM= 67.65 Transcript Type= protein_coding
chr19	8444925	8489114	8444925	8489114	+	transcript1991.chr19.nic@HNRNPM	transcript1991.chr19.nic	protein_coding	8444925,8455405,8462529,8463497,8463593,8465324,8465480,8466235,8467535,8468774,8471326,8473664,8474167,8485603,8487024,8488691	8445111,8455574,8462581,8463504,8463686,8465362,8465515,8466388,8467584,8468834,8471427,8473708,8474244,8486405,8487075,8489114	Gene ID= ENSG00000099783.11 TPM= 13.42 Transcript Type= NA
chr19	8444925	8489114	8444925	8489114	+	transcript1995.chr19.nic@HNRNPM	transcript1995.chr19.nic	protein_coding	8444925,8455405,8462529,8463497,8463593,8465324,8466235,8467535,8468774,8471326,8473664,8474167,8485603,8487024,8488691	8445111,8455574,8462581,8463504,8463686,8465515,8466388,8467584,8468834,8471427,8473708,8474244,8486405,8487075,8489114	Gene ID= ENSG00000099783.11 TPM= 14.58 Transcript Type= NA
chr19	8487302	8489110	8487302	8489110	+	ENST00000602219.1@HNRNPM	ENST00000602219.1	protein_coding	8487302	8489110	Gene ID= ENSG00000099783.11 TPM= 1.3 Transcript Type= processed_transcript
chr19	8444958	8489114	8444958	8489114	+	ENST00000325495.8@HNRNPM	ENST00000325495.8	protein_coding	8444958,8455405,8462529,8463497,8463593,8465324,8466235,8467535,8468774,8471326,8473664,8474167,8483158,8485603,8487024,8488691	8445111,8455574,8462581,8463504,8463686,8465515,8466388,8467584,8468834,8471427,8473708,8474244,8483211,8486405,8487075,8489114	Gene ID= ENSG00000099783.11 TPM= 92.75 Transcript Type= protein_coding
chr19	8455946	8459565	8455946	8459565	-	transcript2039.chr19.nnic@NA	transcript2039.chr19.nnic	NA	8455946	8459565	Gene ID= novel_gene_chr19_2040 TPM= 26.85 Transcript Type= NA
chr19	8490056	8503112	8490056	8503112	-	ENST00000423345.4@PRAM1	ENST00000423345.4	protein_coding	8502565,8498376,8498223,8497764,8491100,8490887,8490594,8490476,8490338,8490056	8503112,8499780,8498289,8497840,8491157,8490995,8490756,8490509,8490372,8490226	Gene ID= ENSG00000133246.11 TPM= 86.99 Transcript Type= protein_coding
chr19	8490056	8494216	8490056	8494216	-	transcript2045.chr19.nnic@PRAM1	transcript2045.chr19.nnic	protein_coding	8492854,8490594,8490476,8490338,8490056	8494216,8492124,8490509,8490372,8490226	Gene ID= ENSG00000133246.11 TPM= 4.09 Transcript Type= NA
chr19	8511335	8514148	8511335	8514148	-	ENST00000255616.8@ZNF414	ENST00000255616.8	protein_coding	8514044,8513029,8512604,8512387,8511617,8511335	8514148,8513341,8512711,8512492,8511960,8511536	Gene ID= ENSG00000133250.13 TPM= 3.5 Transcript Type= protein_coding
chr19	8520790	8577577	8520790	8577577	-	ENST00000338257.12@MYO1F	ENST00000338257.12	protein_coding	8577307,8555659,8554654,8554477,8553350,8553139,8552033,8551740,8550562,8550160,8548237,8548036,8545650,8544297,8541906,8539947,8536949,8536499,8536252,8530459,8530196,8527338,8526789,8526453,8525479,8522634,8522377,8520790	8577577,8555796,8554743,8554571,8553437,8553228,8552164,8551874,8550694,8550356,8548317,8548122,8545736,8544464,8541991,8540028,8537055,8536597,8536396,8530573,8530365,8527483,8526935,8526601,8525562,8522829,8522546,8521604	Gene ID= ENSG00000142347.16 TPM= 5.25 Transcript Type= protein_coding
chr19	8521112	8577464	8521112	8577464	-	transcript2060.chr19.nnic@MYO1F	transcript2060.chr19.nnic	protein_coding	8577307,8555659,8554654,8554477,8553350,8553139,8552033,8551740,8550562,8550160,8548237,8548036,8544297,8541906,8539947,8536949,8536499,8536252,8530459,8530196,8527338,8526789,8526453,8525479,8522634,8522377,8521112	8577464,8555796,8554743,8554571,8553437,8553228,8552164,8551874,8550694,8550356,8548317,8548122,8544464,8541991,8540028,8537055,8536597,8536396,8530573,8530365,8527483,8526935,8526601,8525562,8522829,8522546,8521604	Gene ID= ENSG00000142347.16 TPM= 4.09 Transcript Type= NA
chr19	8545443	8577435	8545443	8577435	-	ENST00000594977.5@MYO1F	ENST00000594977.5	protein_coding	8577307,8555659,8554654,8554477,8553350,8553139,8552033,8551740,8550562,8550156,8548237,8548036,8545443	8577435,8555796,8554743,8554571,8553437,8553228,8552164,8551874,8550694,8550356,8548317,8548122,8545736	Gene ID= ENSG00000142347.16 TPM= 2.34 Transcript Type= retained_intron
chr19	8580242	8594235	8580242	8594235	-	transcript2080.chr19.nic@ADAMTS10	transcript2080.chr19.nic	protein_coding	8592763,8591958,8591800,8589889,8589452,8589242,8586816,8586558,8586344,8586122,8585456,8585132,8584895,8580242	8594235,8592103,8591863,8589991,8589585,8589365,8586896,8586721,8586470,8586251,8585660,8585308,8585054,8581002	Gene ID= ENSG00000142303.13 TPM= 18.68 Transcript Type= NA
chr19	8809706	8832309	8809706	8832309	-	transcript2091.chr19.nnic@ZNF558	transcript2091.chr19.nnic	protein_coding	8832209,8831318,8830770,8825002,8824082,8822629,8822003,8821180,8813127,8812561,8809706	8832309,8831401,8830867,8825108,8824417,8822724,8822091,8821306,8813222,8812643,8812063	Gene ID= ENSG00000167785.8 TPM= 2.34 Transcript Type= NA
chr19	8809706	8832304	8809706	8832304	-	transcript2092.chr19.nic@ZNF558	transcript2092.chr19.nic	protein_coding	8832079,8831318,8830770,8825002,8824082,8822629,8822003,8821180,8813127,8812561,8809706	8832304,8831401,8830891,8825108,8824417,8822724,8822091,8821306,8813222,8812643,8812063	Gene ID= ENSG00000167785.8 TPM= 3.5 Transcript Type= NA
chr19	8809706	8832304	8809706	8832304	-	transcript2093.chr19.nic@ZNF558	transcript2093.chr19.nic	protein_coding	8832079,8831318,8825002,8824082,8822629,8821442,8821180,8813127,8812561,8809706	8832304,8831401,8825108,8824417,8822724,8822091,8821306,8813222,8812643,8812063	Gene ID= ENSG00000167785.8 TPM= 2.92 Transcript Type= NA
chr19	8809706	8832309	8809706	8832309	-	transcript2094.chr19.nic@ZNF558	transcript2094.chr19.nic	protein_coding	8832209,8831318,8825002,8824082,8822629,8821442,8821180,8813127,8812561,8809706	8832309,8831401,8825108,8824417,8822724,8822091,8821306,8813222,8812643,8812063	Gene ID= ENSG00000167785.8 TPM= 2.92 Transcript Type= NA
chr19	8809706	8832304	8809706	8832304	-	transcript2095.chr19.nic@ZNF558	transcript2095.chr19.nic	protein_coding	8832079,8831318,8825002,8824082,8822629,8822003,8821180,8813127,8812561,8809706	8832304,8831401,8825108,8824417,8822724,8822091,8821306,8813222,8812643,8812063	Gene ID= ENSG00000167785.8 TPM= 3.5 Transcript Type= NA
chr19	8806170	8832328	8806170	8832328	-	ENST00000601372.5@ZNF558	ENST00000601372.5	protein_coding	8832209,8831318,8825002,8824082,8822629,8822003,8821180,8813127,8812561,8806170	8832328,8831401,8825108,8824417,8822724,8822091,8821306,8813222,8812643,8812063	Gene ID= ENSG00000167785.8 TPM= 3.5 Transcript Type= protein_coding
chr19	9140380	9163413	9140380	9163413	+	ENST00000247956.10@ZNF317	ENST00000247956.10	protein_coding	9140380,9155925,9156612,9157268,9157980,9158826,9160114	9140592,9156041,9156748,9157394,9158075,9158908,9163413	Gene ID= ENSG00000130803.14 TPM= 18.68 Transcript Type= protein_coding
chr19	9140382	9163413	9140382	9163413	+	transcript2099.chr19.nic@ZNF317	transcript2099.chr19.nic	protein_coding	9140382,9155925,9156612,9157980,9158826,9160114	9140592,9156041,9157394,9158075,9158908,9163413	Gene ID= ENSG00000130803.14 TPM= 5.84 Transcript Type= NA
chr19	9156864	9163413	9156864	9163413	+	transcript2102.chr19.nic@ZNF317	transcript2102.chr19.nic	protein_coding	9156864,9158826,9160114	9158075,9158908,9163413	Gene ID= ENSG00000130803.14 TPM= 8.17 Transcript Type= NA
chr19	9157682	9163413	9157682	9163413	+	transcript2103.chr19.nic@ZNF317	transcript2103.chr19.nic	protein_coding	9157682,9160114	9158908,9163413	Gene ID= ENSG00000130803.14 TPM= 15.18 Transcript Type= NA
chr19	9140397	9163408	9140397	9163408	+	ENST00000360385.7@ZNF317	ENST00000360385.7	protein_coding	9140397,9155925,9156612,9157268,9158826,9160114	9140592,9156041,9156748,9157394,9158908,9163408	Gene ID= ENSG00000130803.14 TPM= 3.5 Transcript Type= protein_coding
chr19	9324231	9343843	9324231	9343843	+	transcript2111.chr19.nic@ZNF559	transcript2111.chr19.nic	protein_coding	9324231,9324695,9337796,9338494,9339193,9341102,9341617	9324404,9324780,9338017,9338582,9339319,9341184,9343843	Gene ID= ENSG00000188321.13 TPM= 2.34 Transcript Type= NA
chr19	9323772	9343843	9323772	9343843	+	ENST00000603380.5@ZNF559	ENST00000603380.5	protein_coding	9323772,9324695,9337796,9338494,9339193,9341102,9341695	9324228,9324780,9337858,9338582,9339319,9341184,9343843	Gene ID= ENSG00000188321.13 TPM= 2.34 Transcript Type= protein_coding
chr19	9412427	9435514	9412427	9435514	-	transcript2129.chr19.nnic@ZNF266	transcript2129.chr19.nnic	protein_coding	9435284,9435108,9434798,9433668,9420065,9419217,9418505,9417828,9415654,9412427	9435514,9435193,9434859,9433786,9420218,9419289,9418631,9417908,9415742,9414720	Gene ID= ENSG00000174652.17 TPM= 2.34 Transcript Type= NA
chr19	9412598	9435573	9412598	9435573	-	transcript2140.chr19.nic@ZNF266	transcript2140.chr19.nic	protein_coding	9435284,9435108,9434798,9420065,9418505,9417828,9415654,9412598	9435573,9435193,9434859,9420218,9419299,9417908,9415742,9414720	Gene ID= ENSG00000174652.17 TPM= 4.67 Transcript Type= NA
chr19	9528007	9538645	9528007	9538645	-	transcript2144.chr19.nic@ZNF426	transcript2144.chr19.nic	protein_coding	9538259,9536208,9535188,9533840,9532845,9530985,9528007	9538645,9536356,9535279,9533966,9532925,9531067,9529636	Gene ID= ENSG00000130818.11 TPM= 8.17 Transcript Type= NA
chr19	9523224	9538627	9523224	9538627	-	ENST00000253115.6@ZNF426	ENST00000253115.6	protein_coding	9538575,9538259,9536208,9535188,9533840,9532845,9530985,9523224	9538627,9538345,9536356,9535279,9533966,9532925,9531067,9529636	Gene ID= ENSG00000130818.11 TPM= 5.84 Transcript Type= protein_coding
chr19	9528007	9538590	9528007	9538590	-	ENST00000593003.5@ZNF426	ENST00000593003.5	protein_coding	9538259,9536208,9533840,9532845,9530985,9528007	9538590,9536356,9533966,9532925,9531067,9529636	Gene ID= ENSG00000130818.11 TPM= 2.34 Transcript Type= protein_coding
chr19	9560331	9584533	9560331	9584533	-	transcript2164.chr19.nnic@ZNF121	transcript2164.chr19.nnic	protein_coding	9584461,9569002,9568095,9565540,9560331	9584533,9569082,9568175,9567109,9562354	Gene ID= ENSG00000197961.11 TPM= 4.67 Transcript Type= NA
chr19	9565782	9584533	9565782	9584533	-	ENST00000320451.6@ZNF121	ENST00000320451.6	protein_coding	9584461,9569002,9568095,9565782	9584533,9569082,9568175,9567109	Gene ID= ENSG00000197961.11 TPM= 1.17 Transcript Type= protein_coding
chr19	9621505	9634721	9621505	9634721	+	ENST00000585797.4@ZNF561-AS1	ENST00000585797.4	processed_transcript	9621505,9632228,9633460	9621645,9632417,9634721	Gene ID= ENSG00000267106.5 TPM= 1.17 Transcript Type= antisense_RNA
chr19	9621547	9645489	9621547	9645489	+	ENST00000592851.5@ZNF561-AS1	ENST00000592851.5	processed_transcript	9621547,9626784,9632228,9645074	9621645,9626860,9632417,9645489	Gene ID= ENSG00000267106.5 TPM= 1.17 Transcript Type= antisense_RNA
chr19	9652620	9675055	9652620	9675055	-	transcript2161.chr19.nic@ZNF562	transcript2161.chr19.nic	protein_coding	9674632,9660720,9659379,9658009,9656547,9652620	9675055,9660874,9659467,9658135,9656653,9653878	Gene ID= ENSG00000171466.9 TPM= 2.34 Transcript Type= NA
chr19	9648301	9650047	9648301	9650047	-	transcript2185.chr19.nnic@NA	transcript2185.chr19.nnic	NA	9648301	9650047	Gene ID= novel_gene_chr19_2186 TPM= 2.34 Transcript Type= NA
chr19	9810271	9819076	9810271	9819076	-	ENST00000588922.5@FBXL12	ENST00000588922.5	protein_coding	9818754,9818545,9810271	9819076,9818617,9811717	Gene ID= ENSG00000127452.8 TPM= 15.56 Transcript Type= protein_coding
chr19	9810267	9819055	9810267	9819055	-	ENST00000247977.8@FBXL12	ENST00000247977.8	protein_coding	9818728,9818545,9810267	9819055,9818617,9811717	Gene ID= ENSG00000127452.8 TPM= 16.73 Transcript Type= protein_coding
chr19	9810267	9818829	9810267	9818829	-	ENST00000586651.5@FBXL12	ENST00000586651.5	protein_coding	9818545,9810267	9818829,9811717	Gene ID= ENSG00000127452.8 TPM= 6.22 Transcript Type= protein_coding
chr19	9827892	9830115	9827892	9830115	+	ENST00000358666.7@UBL5	ENST00000358666.7	protein_coding	9827892,9828327,9828592,9828837,9829965	9828064,9828393,9828675,9828874,9830115	Gene ID= ENSG00000198258.10 TPM= 26.66 Transcript Type= protein_coding
chr19	9827886	9830115	9827886	9830115	+	transcript2205.chr19.nic@UBL5	transcript2205.chr19.nic	protein_coding	9827886,9828327,9828837,9829965	9827984,9828675,9828874,9830115	Gene ID= ENSG00000198258.10 TPM= 6.22 Transcript Type= NA
chr19	9827892	9830114	9827892	9830114	+	ENST00000586895.5@UBL5	ENST00000586895.5	protein_coding	9827892,9828327,9828592,9828837,9829965	9827984,9828393,9828675,9828874,9830114	Gene ID= ENSG00000198258.10 TPM= 82.7 Transcript Type= protein_coding
chr19	9835323	9849682	9835323	9849682	+	ENST00000247970.8@PIN1	ENST00000247970.8	protein_coding	9835323,9838436,9848030,9849090	9835402,9838648,9848140,9849682	Gene ID= ENSG00000127445.13 TPM= 163.46 Transcript Type= protein_coding
chr19	9853718	9936552	9853718	9936552	-	ENST00000264833.8@OLFM2	ENST00000264833.8	protein_coding	9936304,9860645,9857715,9857263,9856807,9853718	9936552,9860794,9857861,9857482,9856913,9854863	Gene ID= ENSG00000105088.8 TPM= 35.03 Transcript Type= protein_coding
chr19	9855539	9858232	9855539	9858232	-	transcript2216.chr19.nnic@NA	transcript2216.chr19.nnic	NA	9855539	9858232	Gene ID= novel_gene_chr19_2217 TPM= 3.5 Transcript Type= NA
chr19	9959561	10010471	9959561	10010471	-	ENST00000264828.3@COL5A3	ENST00000264828.3	protein_coding	10010298,10006073,10005796,10005558,10004041,10003565,10001768,10001524,9998102,9997984,9997371,9996615,9996433,9996206,9996066,9995564,9993753,9993619,9993380,9993023,9992827,9992004,9991788,9991610,9989469,9989322,9989124,9986714,9986553,9986315,9985842,9982065,9981088,9980806,9980648,9979994,9979839,9979364,9979132,9978891,9978574,9977594,9977365,9977229,9976558,9974301,9974171,9973919,9973756,9973570,9972919,9971205,9970975,9970622,9969869,9969575,9969349,9968675,9968385,9968026,9967904,9967347,9966536,9966314,9962819,9960651,9959561	10010471,10006231,10005985,10005714,10004145,10003714,10001881,10001670,9998149,9998025,9997433,9996689,9996516,9996262,9996119,9995617,9993806,9993672,9993433,9993067,9992880,9992048,9991841,9991654,9989522,9989366,9989177,9986758,9986606,9986422,9985895,9982118,9981132,9980859,9980692,9980047,9979892,9979417,9979239,9978980,9978627,9977701,9977472,9977282,9976611,9974408,9974224,9973972,9973809,9973623,9973026,9971258,9971028,9970675,9969922,9969682,9969402,9968728,9968492,9968079,9967939,9967400,9966746,9966426,9962887,9960890,9960557	Gene ID= ENSG00000080573.6 TPM= 14.01 Transcript Type= protein_coding
chr19	10086197	10093242	10086197	10093242	+	transcript2244.chr19.nic@C19orf66	transcript2244.chr19.nic	protein_coding	10086197,10086929,10087251,10089111,10089307,10089657,10089898,10091250,10091476,10092070	10086448,10087052,10087300,10089208,10089378,10089695,10090047,10091353,10091630,10093242	Gene ID= ENSG00000130813.17 TPM= 6.15 Transcript Type= NA
chr19	10086130	10093245	10086130	10093245	+	ENST00000253110.15@C19orf66	ENST00000253110.15	protein_coding	10086130,10086929,10087251,10089657,10089898,10091250,10091476,10092070	10086448,10087052,10087300,10089695,10090047,10091353,10091630,10093245	Gene ID= ENSG00000130813.17 TPM= 75.04 Transcript Type= protein_coding
chr19	10086297	10093252	10086297	10093252	+	ENST00000585919.5@C19orf66	ENST00000585919.5	protein_coding	10086297,10086929,10087251,10089657,10089898,10091250,10092070	10086448,10087052,10087300,10089695,10090047,10091630,10093252	Gene ID= ENSG00000130813.17 TPM= 39.23 Transcript Type= retained_intron
chr19	10092338	10096598	10092338	10096598	-	ENST00000589181.5@ANGPTL6	ENST00000589181.5	protein_coding	10095982,10094758,10093813,10093349,10092338	10096598,10094938,10093880,10093619,10092779	Gene ID= ENSG00000130812.10 TPM= 1.17 Transcript Type= protein_coding
chr19	10106328	10111294	10106328	10111294	+	transcript2237.chr19.nic@PPAN-P2RY11	transcript2237.chr19.nic	protein_coding	10106328,10106501,10107505,10107804,10107964,10109631,10109913,10110123,10110324,10110697,10110945	10106412,10106671,10107606,10107854,10108134,10109707,10110020,10110246,10110614,10110866,10111294	Gene ID= ENSG00000243207.6 TPM= 6.22 Transcript Type= NA
chr19	10106328	10111296	10106328	10111296	+	transcript2231.chr19.nic@PPAN	transcript2231.chr19.nic	protein_coding	10106328,10106501,10107505,10107804,10107964,10109631,10109913,10110123,10110324,10110485,10110697,10110945	10106412,10106671,10107606,10107854,10108134,10109707,10110020,10110246,10110402,10110614,10110791,10111296	Gene ID= ENSG00000130810.19 TPM= 4.67 Transcript Type= NA
chr19	10106289	10111294	10106289	10111294	+	ENST00000253107.11@PPAN	ENST00000253107.11	protein_coding	10106289,10106501,10107505,10107804,10107964,10109631,10109913,10110123,10110324,10110485,10110697,10110945	10106412,10106671,10107606,10107854,10108134,10109707,10110020,10110246,10110402,10110614,10110866,10111294	Gene ID= ENSG00000130810.19 TPM= 60.52 Transcript Type= protein_coding
chr19	10106419	10111254	10106419	10111254	+	ENST00000393793.5@PPAN	ENST00000393793.5	protein_coding	10106419,10107505,10107804,10107964,10109631,10109913,10110123,10110324,10110485,10110697,10110945	10106671,10107606,10107854,10108134,10109707,10110020,10110246,10110402,10110614,10110866,10111254	Gene ID= ENSG00000130810.19 TPM= 2.34 Transcript Type= protein_coding
chr19	10115017	10119902	10115017	10119902	-	ENST00000253108.8@EIF3G	ENST00000253108.8	protein_coding	10119840,10119654,10119088,10118868,10118668,10117084,10116800,10115967,10115684,10115479,10115017	10119902,10119700,10119171,10118956,10118727,10117188,10116989,10116074,10115820,10115585,10115129	Gene ID= ENSG00000130811.11 TPM= 170.27 Transcript Type= protein_coding
chr19	10115017	10119927	10115017	10119927	-	transcript2249.chr19.nic@EIF3G	transcript2249.chr19.nic	protein_coding	10119840,10119654,10119088,10118868,10118668,10117084,10115967,10115684,10115479,10115017	10119927,10119700,10119171,10118956,10118727,10117188,10116989,10115820,10115585,10115129	Gene ID= ENSG00000130811.11 TPM= 13.23 Transcript Type= NA
chr19	10115017	10119927	10115017	10119927	-	transcript2256.chr19.nic@EIF3G	transcript2256.chr19.nic	protein_coding	10119840,10119654,10118868,10117084,10116800,10115967,10115684,10115479,10115017	10119927,10119700,10119171,10118727,10116989,10116074,10115820,10115585,10115129	Gene ID= ENSG00000130811.11 TPM= 17.32 Transcript Type= NA
chr19	10133346	10195135	10133346	10195135	-	ENST00000340748.8@DNMT1	ENST00000340748.8	protein_coding	10194820,10182041,10180778,10180350,10177292,10175540,10173871,10173090,10168330,10166598,10163326,10162667,10160384,10160018,10159842,10159658,10156391,10155853,10154905,10154586,10154293,10151750,10151398,10149853,10149453,10148884,10146351,10143766,10142028,10141105,10140781,10140046,10139676,10138439,10137832,10137085,10136121,10135736,10134217,10133346	10195135,10182077,10180885,10180569,10177367,10175618,10173905,10173174,10168364,10166685,10163360,10162748,10160418,10160063,10159922,10159767,10156509,10155945,10155056,10154773,10154479,10151847,10151545,10149968,10149657,10149017,10146524,10143987,10142220,10141189,10140909,10140328,10139817,10138605,10138009,10137280,10136287,10135852,10134307,10133701	Gene ID= ENSG00000130816.14 TPM= 26.47 Transcript Type= protein_coding
chr19	10133346	10142873	10133346	10142873	-	transcript2230.chr19.nic@DNMT1	transcript2230.chr19.nic	protein_coding	10142819,10142028,10141105,10140781,10140046,10139676,10138439,10137832,10137085,10136121,10135736,10134217,10133346	10142873,10142220,10141189,10140909,10140328,10139817,10138605,10138009,10137280,10136287,10135852,10134307,10133701	Gene ID= ENSG00000130816.14 TPM= 6.62 Transcript Type= NA
chr19	10133346	10140809	10133346	10140809	-	transcript2269.chr19.nic@DNMT1	transcript2269.chr19.nic	protein_coding	10139676,10138439,10137832,10137085,10136121,10135736,10134217,10133346	10140809,10138605,10138009,10137280,10136287,10135852,10134307,10133701	Gene ID= ENSG00000130816.14 TPM= 5.84 Transcript Type= NA
chr19	10133346	10194934	10133346	10194934	-	ENST00000592705.5@DNMT1	ENST00000592705.5	protein_coding	10194820,10182041,10180778,10180350,10180187,10177292,10175540,10173871,10173090,10168330,10166598,10163326,10162667,10160384,10160018,10159842,10159658,10156391,10155853,10154905,10154586,10154293,10151750,10151398,10149853,10149453,10148884,10146351,10143766,10142028,10141105,10140781,10140046,10139676,10138439,10137832,10137085,10136121,10135736,10134217,10133346	10194934,10182077,10180885,10180529,10180234,10177367,10175618,10173905,10173174,10168364,10166685,10163360,10162748,10160418,10160063,10159922,10159767,10156509,10155945,10155056,10154773,10154479,10151847,10151545,10149968,10149657,10149017,10146524,10143987,10142220,10141189,10140909,10140328,10139817,10138605,10138009,10137280,10136287,10135852,10134307,10133701	Gene ID= ENSG00000130816.14 TPM= 10.12 Transcript Type= nonsense_mediated_decay
chr19	10140374	10142394	10140374	10142394	-	transcript2290.chr19.nnic@NA	transcript2290.chr19.nnic	NA	10140374	10142394	Gene ID= novel_gene_chr19_2291 TPM= 4.67 Transcript Type= NA
chr19	10221435	10231272	10221435	10231272	-	ENST00000590320.2@S1PR2	ENST00000590320.2	protein_coding	10231204,10221435	10231272,10224947	Gene ID= ENSG00000267534.2 TPM= 68.89 Transcript Type= protein_coding
chr19	10230319	10231801	10230319	10231801	+	transcript2288.chr19.nnic@NA	transcript2288.chr19.nnic	NA	10230319	10231801	Gene ID= novel_gene_chr19_2289 TPM= 2.34 Transcript Type= NA
chr19	10251983	10260045	10251983	10260045	+	transcript2297.chr19.nic@MRPL4	transcript2297.chr19.nic	protein_coding	10251983,10252397,10252551,10254589,10256708,10258222,10258413,10259617	10252310,10252463,10252701,10254640,10256825,10258328,10258685,10260045	Gene ID= ENSG00000105364.13 TPM= 5.25 Transcript Type= NA
chr19	10251918	10259125	10251918	10259125	+	transcript2300.chr19.nic@MRPL4	transcript2300.chr19.nic	protein_coding	10251918,10252397,10252551,10254589,10256708,10258222,10258413	10252310,10252463,10252701,10254640,10256825,10258328,10259125	Gene ID= ENSG00000105364.13 TPM= 2.92 Transcript Type= NA
chr19	10251983	10259125	10251983	10259125	+	transcript2301.chr19.nnic@MRPL4	transcript2301.chr19.nnic	protein_coding	10251983,10252397,10252551,10254589,10256708,10258413	10252310,10252463,10252701,10254640,10256825,10259125	Gene ID= ENSG00000105364.13 TPM= 2.92 Transcript Type= NA
chr19	10251967	10260045	10251967	10260045	+	ENST00000253099.10@MRPL4	ENST00000253099.10	protein_coding	10251967,10252397,10252551,10254589,10256708,10258222,10258413,10258609,10259617	10252310,10252463,10252701,10254640,10256825,10258328,10258522,10258685,10260045	Gene ID= ENSG00000105364.13 TPM= 71.81 Transcript Type= protein_coding
chr19	10270479	10286615	10270479	10286615	+	transcript2325.chr19.nic@ICAM1	transcript2325.chr19.nic	protein_coding	10270479,10274765,10283481,10284033,10284403,10284783	10271226,10275028,10283786,10284320,10284657,10286615	Gene ID= ENSG00000090339.8 TPM= 42.82 Transcript Type= NA
chr19	10271120	10286615	10271120	10286615	+	transcript2329.chr19.nnic@ICAM1	transcript2329.chr19.nnic	protein_coding	10271120,10283481,10284033,10284403,10284783,10285115	10271226,10283786,10284320,10284657,10285028,10286615	Gene ID= ENSG00000090339.8 TPM= 143.81 Transcript Type= NA
chr19	10286974	10288502	10286974	10288502	+	ENST00000340992.4@ICAM4	ENST00000340992.4	protein_coding	10286974,10287613,10287986	10287406,10287838,10288502	Gene ID= ENSG00000105371.8 TPM= 3.5 Transcript Type= protein_coding
chr19	10286967	10288453	10286967	10288453	+	ENST00000380770.3@ICAM4	ENST00000380770.3	protein_coding	10286967,10287536,10287986	10287406,10287838,10288453	Gene ID= ENSG00000105371.8 TPM= 7.01 Transcript Type= protein_coding
chr19	10289979	10296778	10289979	10296778	+	transcript2304.chr19.nic@ICAM5	transcript2304.chr19.nic	protein_coding	10289979,10291072,10291489,10292035,10292612,10292998,10293698,10294040,10294401,10295346	10290125,10291341,10291809,10292322,10292866,10293246,10293943,10294318,10294640,10296778	Gene ID= ENSG00000105376.4 TPM= 21.8 Transcript Type= NA
chr19	10291033	10296778	10291033	10296778	+	transcript2306.chr19.nic@ICAM5	transcript2306.chr19.nic	protein_coding	10291033,10291489,10292035,10292612,10292998,10293698,10294040,10294401,10295346	10291341,10291809,10292322,10292866,10293246,10293943,10294318,10294640,10296778	Gene ID= ENSG00000105376.4 TPM= 16.9 Transcript Type= NA
chr19	10291446	10296778	10291446	10296778	+	transcript2312.chr19.nic@ICAM5	transcript2312.chr19.nic	protein_coding	10291446,10292035,10292612,10292998,10293698,10294040,10294401,10295346	10291809,10292322,10292866,10293246,10293943,10294318,10294640,10296778	Gene ID= ENSG00000105376.4 TPM= 16.9 Transcript Type= NA
chr19	10291446	10296778	10291446	10296778	+	transcript2323.chr19.nic@ICAM5	transcript2323.chr19.nic	protein_coding	10291446,10292035,10292612,10292998,10293698,10294040,10295346	10291809,10292322,10292866,10293246,10293943,10294640,10296778	Gene ID= ENSG00000105376.4 TPM= 6.39 Transcript Type= NA
chr19	10289981	10296778	10289981	10296778	+	ENST00000221980.4@ICAM5	ENST00000221980.4	protein_coding	10289981,10291072,10291489,10292035,10292612,10292998,10293698,10294040,10294401,10295346,10296339	10290125,10291341,10291809,10292322,10292866,10293246,10293943,10294318,10294640,10295612,10296778	Gene ID= ENSG00000105376.4 TPM= 25.07 Transcript Type= protein_coding
chr19	10291473	10296776	10291473	10296776	+	ENST00000586480.1@ICAM5	ENST00000586480.1	protein_coding	10291473,10292035,10292612,10292998,10293698,10294040,10294401,10295346,10296339	10291809,10292322,10292866,10293246,10293943,10294318,10294640,10295612,10296776	Gene ID= ENSG00000105376.4 TPM= 8.72 Transcript Type= retained_intron
chr19	10304803	10316647	10304803	10316647	-	transcript2354.chr19.nic@AC011511.1	transcript2354.chr19.nic	protein_coding	10315705,10315386,10310853,10310327,10309557,10309349,10308185,10305846,10305390,10304803	10316647,10315492,10310940,10310642,10310283,10309448,10308550,10305952,10305483,10305208	Gene ID= ENSG00000167807.15 TPM= 4.67 Transcript Type= NA
chr19	10304803	10316019	10304803	10316019	-	transcript2355.chr19.nic@AC011511.1	transcript2355.chr19.nic	protein_coding	10315852,10315705,10315386,10310853,10310327,10309349,10308185,10305846,10305390,10304803	10316019,10315759,10315492,10310940,10310642,10310283,10308550,10305952,10305483,10305208	Gene ID= ENSG00000167807.15 TPM= 4.67 Transcript Type= NA
chr19	10310045	10316015	10310045	10316015	-	ENST00000393708.3@FDX2	ENST00000393708.3	protein_coding	10315852,10315705,10315386,10310853,10310045	10316015,10315759,10315492,10310940,10310642	Gene ID= ENSG00000267673.6 TPM= 15.18 Transcript Type= protein_coding
chr19	10316212	10333640	10316212	10333640	-	ENST00000293677.10@RAVER1	ENST00000293677.10	protein_coding	10333289,10330460,10328642,10323375,10323145,10322645,10321531,10321048,10320655,10319166,10318229,10317690,10316212	10333640,10330526,10329111,10323566,10323274,10322739,10321618,10321259,10320951,10319240,10318372,10317773,10317600	Gene ID= ENSG00000161847.13 TPM= 22.18 Transcript Type= protein_coding
chr19	10333776	10339823	10333776	10339823	-	ENST00000160262.9@ICAM3	ENST00000160262.9	protein_coding	10339539,10338682,10335671,10335066,10334528,10334160,10333776	10339823,10338948,10335976,10335353,10334782,10334408,10334059	Gene ID= ENSG00000076662.9 TPM= 33.86 Transcript Type= protein_coding
chr19	10333776	10339674	10333776	10339674	-	transcript2358.chr19.nic@ICAM3	transcript2358.chr19.nic	protein_coding	10339539,10338682,10335671,10334528,10334160,10333776	10339674,10338948,10335976,10335353,10334408,10334059	Gene ID= ENSG00000076662.9 TPM= 6.42 Transcript Type= NA
chr19	10333776	10339674	10333776	10339674	-	transcript2362.chr19.nic@ICAM3	transcript2362.chr19.nic	protein_coding	10339539,10338682,10334528,10334160,10333776	10339674,10338948,10335976,10334408,10334059	Gene ID= ENSG00000076662.9 TPM= 9.92 Transcript Type= NA
chr19	10350533	10380676	10350533	10380676	-	ENST00000525621.5@TYK2	ENST00000525621.5	protein_coding	10380380,10379615,10378214,10368295,10368055,10366417,10365517,10364851,10364614,10362549,10362264,10362078,10361770,10361511,10359175,10358003,10357764,10356568,10354512,10354042,10353528,10352926,10352434,10351052,10350533	10380676,10379779,10378426,10368418,10368202,10366580,10365898,10365048,10364771,10362657,10362456,10362181,10361955,10361598,10359302,10358138,10357918,10356718,10354609,10354234,10353646,10353098,10352551,10351162,10350968	Gene ID= ENSG00000105397.13 TPM= 92.92 Transcript Type= protein_coding
chr19	10350533	10380598	10350533	10380598	-	transcript2377.chr19.nnic@TYK2	transcript2377.chr19.nnic	protein_coding	10380380,10379615,10378214,10368295,10368055,10366417,10365517,10364851,10364614,10362549,10362264,10362078,10361770,10361511,10359175,10358003,10357764,10356568,10354512,10353528,10352926,10352434,10351052,10350533	10380598,10379779,10378426,10368418,10368202,10366580,10365898,10365048,10364771,10362657,10362456,10362181,10361836,10361598,10359302,10358138,10357918,10356718,10354609,10354234,10353098,10352551,10351162,10350968	Gene ID= ENSG00000105397.13 TPM= 15.86 Transcript Type= NA
chr19	10350533	10380598	10350533	10380598	-	transcript2378.chr19.nic@TYK2	transcript2378.chr19.nic	protein_coding	10380380,10379615,10378214,10368295,10368055,10366417,10365517,10364851,10364614,10362549,10362264,10362078,10361770,10361511,10359175,10358003,10357764,10356568,10354512,10353528,10352926,10352434,10351052,10350533	10380598,10379779,10378426,10368418,10368202,10366580,10365898,10365048,10364771,10362657,10362456,10362181,10361955,10361598,10359302,10358138,10357918,10356718,10354609,10354234,10353098,10352551,10351162,10350968	Gene ID= ENSG00000105397.13 TPM= 33.37 Transcript Type= NA
chr19	10391134	10403592	10391134	10403592	-	transcript2398.chr19.nic@CDC37	transcript2398.chr19.nic	protein_coding	10403378,10395928,10395435,10395228,10395021,10393259,10393086,10391134	10403592,10396203,10395696,10395343,10395143,10393441,10393157,10391706	Gene ID= ENSG00000105401.8 TPM= 8.96 Transcript Type= NA
chr19	10391134	10403533	10391134	10403533	-	ENST00000222005.6@CDC37	ENST00000222005.6	protein_coding	10403378,10395928,10395435,10395228,10395021,10393259,10393086,10391134	10403533,10396203,10395543,10395343,10395143,10393441,10393157,10391706	Gene ID= ENSG00000105401.8 TPM= 321.87 Transcript Type= protein_coding
chr19	10430715	10467931	10430715	10467931	+	transcript2406.chr19.nnic@PDE4A	transcript2406.chr19.nnic	protein_coding	10430715,10446218,10448917,10449080,10450603,10450829,10454829,10457650,10457879,10459400,10459595,10461004,10461526,10461877,10463793,10466887	10431086,10446409,10448953,10449150,10450652,10450941,10454922,10457780,10458102,10459498,10459759,10461103,10461680,10461999,10463975,10467931	Gene ID= ENSG00000065989.15 TPM= 15.18 Transcript Type= NA
chr19	10430790	10469630	10430790	10469630	+	transcript2412.chr19.nic@PDE4A	transcript2412.chr19.nic	protein_coding	10430790,10446218,10448917,10449080,10450603,10450829,10454829,10457879,10459400,10459595,10461004,10461526,10461877,10463793,10466887	10431086,10446409,10448953,10449150,10450652,10450941,10454922,10458102,10459498,10459759,10461103,10461680,10461999,10464009,10469630	Gene ID= ENSG00000065989.15 TPM= 33.86 Transcript Type= NA
chr19	10486120	10503741	10486120	10503741	-	ENST00000171111.9@KEAP1	ENST00000171111.9	protein_coding	10503241,10499395,10491577,10489648,10489192,10486120	10503741,10500080,10492262,10489853,10489368,10486818	Gene ID= ENSG00000079999.13 TPM= 73.94 Transcript Type= protein_coding
chr19	10486126	10502896	10486126	10502896	-	ENST00000393623.6@KEAP1	ENST00000393623.6	protein_coding	10502697,10499395,10491577,10489648,10489192,10486126	10502896,10500080,10492262,10489853,10489368,10486818	Gene ID= ENSG00000079999.13 TPM= 135.83 Transcript Type= protein_coding
chr19	10512947	10517931	10512947	10517931	-	ENST00000439028.3@S1PR5	ENST00000439028.3	protein_coding	10517824,10512947	10517931,10515029	Gene ID= ENSG00000180739.13 TPM= 2.34 Transcript Type= protein_coding
chr19	10512742	10517450	10512742	10517450	-	ENST00000333430.5@S1PR5	ENST00000333430.5	protein_coding	10517398,10512742	10517450,10515029	Gene ID= ENSG00000180739.13 TPM= 1.17 Transcript Type= protein_coding
chr19	10543904	10553418	10543904	10553418	+	transcript2455.chr19.nic@ATG4D	transcript2455.chr19.nic	protein_coding	10543904,10544783,10544957,10546839,10548904,10551897,10552045,10552205,10552885	10544325,10544866,10545130,10547253,10549034,10551975,10552121,10552324,10553418	Gene ID= ENSG00000130734.9 TPM= 8.47 Transcript Type= NA
chr19	10543903	10553418	10543903	10553418	+	transcript2457.chr19.nic@ATG4D	transcript2457.chr19.nic	protein_coding	10543903,10544709,10544957,10548904,10551897,10552045,10552205,10552885	10544325,10544866,10545130,10549034,10551975,10552121,10552324,10553418	Gene ID= ENSG00000130734.9 TPM= 2.63 Transcript Type= NA
chr19	10543905	10553418	10543905	10553418	+	transcript2459.chr19.nic@ATG4D	transcript2459.chr19.nic	protein_coding	10543905,10544783,10544957,10548904,10551897,10552045,10552205,10552885	10544325,10544866,10545130,10549034,10551975,10552121,10552324,10553418	Gene ID= ENSG00000130734.9 TPM= 4.96 Transcript Type= NA
chr19	10543918	10553418	10543918	10553418	+	ENST00000309469.8@ATG4D	ENST00000309469.8	protein_coding	10543918,10544783,10544957,10546839,10547189,10548904,10551897,10552045,10552205,10552885	10544325,10544866,10545130,10547115,10547253,10549034,10551975,10552121,10552324,10553418	Gene ID= ENSG00000130734.9 TPM= 25.98 Transcript Type= protein_coding
chr19	10553078	10566037	10553078	10566037	-	ENST00000312962.10@KRI1	ENST00000312962.10	protein_coding	10565906,10565717,10564929,10562729,10561791,10561667,10561169,10561003,10560312,10559810,10559613,10559359,10558164,10557972,10557769,10557552,10555285,10555087,10553078	10566037,10565790,10565034,10562837,10561845,10561716,10561265,10561080,10560448,10559936,10559708,10559529,10558239,10558060,10557895,10557682,10555349,10555185,10554281	Gene ID= ENSG00000129347.19 TPM= 7.01 Transcript Type= protein_coding
chr19	10553576	10565673	10553576	10565673	-	transcript2444.chr19.nic@KRI1	transcript2444.chr19.nic	protein_coding	10564929,10562729,10561791,10561667,10561169,10561003,10560312,10559810,10559359,10558164,10557972,10557552,10555285,10555087,10553576	10565673,10562837,10561845,10561716,10561265,10561080,10560448,10559936,10559708,10558239,10558060,10557895,10555349,10555185,10554281	Gene ID= ENSG00000129347.19 TPM= 3.5 Transcript Type= NA
chr19	10553576	10565971	10553576	10565971	-	ENST00000478863.5@KRI1	ENST00000478863.5	protein_coding	10565906,10565717,10564929,10562729,10561791,10561667,10561169,10561003,10560312,10559810,10559613,10559359,10558164,10557972,10557552,10555285,10555087,10553576	10565971,10565790,10565034,10562837,10561845,10561716,10561265,10561080,10560448,10559936,10559708,10559529,10558239,10558060,10557895,10555349,10555185,10554281	Gene ID= ENSG00000129347.19 TPM= 5.84 Transcript Type= retained_intron
chr19	10572671	10587313	10572671	10587313	-	transcript2447.chr19.nic@AP1M2	transcript2447.chr19.nic	protein_coding	10587155,10583914,10583606,10581748,10581487,10581266,10579716,10578892,10577198,10574904,10574417,10572671	10587313,10584070,10583673,10581878,10581634,10581392,10579858,10578963,10577356,10575029,10574492,10573088	Gene ID= ENSG00000129354.11 TPM= 10.51 Transcript Type= NA
chr19	10572672	10587314	10572672	10587314	-	ENST00000250244.10@AP1M2	ENST00000250244.10	protein_coding	10587190,10583914,10583606,10581748,10581487,10581266,10579716,10578892,10577198,10574904,10574417,10572672	10587314,10584070,10583673,10581878,10581634,10581392,10579858,10578963,10577356,10575029,10574492,10573088	Gene ID= ENSG00000129354.11 TPM= 59.55 Transcript Type= protein_coding
chr19	10625258	10644559	10625258	10644559	+	ENST00000335757.9@SLC44A2	ENST00000335757.9	protein_coding	10625258,10626253,10627722,10627920,10631057,10631275,10631475,10631626,10631868,10632044,10634756,10634974,10635163,10635431,10636323,10636662,10637644,10637856,10638023,10638227,10642367,10643279	10625670,10626301,10627795,10628004,10631141,10631385,10631535,10631749,10631951,10632156,10634887,10635073,10635255,10635515,10636585,10636756,10637747,10637929,10638093,10638315,10642451,10644559	Gene ID= ENSG00000129353.14 TPM= 262.72 Transcript Type= protein_coding
chr19	10602510	10644550	10602510	10644550	+	ENST00000407327.8@SLC44A2	ENST00000407327.8	protein_coding	10602510,10626253,10627722,10627920,10631057,10631275,10631475,10631626,10631868,10632044,10634756,10634974,10635163,10635431,10636323,10636662,10637644,10637856,10638023,10638227,10642367,10643279	10602561,10626301,10627795,10628004,10631141,10631385,10631535,10631749,10631951,10632156,10634887,10635073,10635255,10635515,10636585,10636756,10637747,10637929,10638093,10638315,10642451,10644550	Gene ID= ENSG00000129353.14 TPM= 258.44 Transcript Type= protein_coding
chr19	10625525	10644557	10625525	10644557	+	ENST00000586078.5@SLC44A2	ENST00000586078.5	protein_coding	10625525,10626253,10627722,10627920,10631057,10631275,10631475,10631626,10631868,10632044,10634756,10634974,10635163,10635431,10636323,10636662,10637644,10637856,10638023,10638227,10642367,10642897	10625670,10626301,10627795,10628004,10631141,10631385,10631535,10631749,10631951,10632156,10634887,10635073,10635255,10635515,10636585,10636756,10637747,10637929,10638093,10638315,10642451,10644557	Gene ID= ENSG00000129353.14 TPM= 16.24 Transcript Type= protein_coding
chr19	10635804	10644555	10635804	10644555	+	ENST00000589561.5@SLC44A2	ENST00000589561.5	protein_coding	10635804,10636662,10637644,10637856,10638023,10638227,10642367,10643279	10636585,10636756,10637747,10637929,10638093,10638315,10642451,10644555	Gene ID= ENSG00000129353.14 TPM= 13.93 Transcript Type= retained_intron
chr19	10651862	10653844	10651862	10653844	-	ENST00000591501.1@ILF3-AS1	ENST00000591501.1	lincRNA	10651862	10653844	Gene ID= ENSG00000267100.1 TPM= 17.51 Transcript Type= lincRNA
chr19	10654277	10692398	10654277	10692398	+	transcript2514.chr19.nic@ILF3	transcript2514.chr19.nic	protein_coding	10654277,10670516,10670974,10671358,10677163,10678613,10679097,10679816,10680346,10681019,10681219,10681993,10682537,10683137,10683366,10683636,10683917,10687346,10688550,10689179	10654487,10670608,10671203,10671535,10677310,10678704,10679192,10679927,10680443,10681130,10681329,10682192,10682704,10683262,10683542,10683789,10683970,10687708,10688678,10692398	Gene ID= ENSG00000129351.17 TPM= 66.75 Transcript Type= NA
chr19	10654310	10685765	10654310	10685765	+	transcript2519.chr19.nic@ILF3	transcript2519.chr19.nic	protein_coding	10654310,10670516,10670974,10671358,10677163,10678613,10679097,10679816,10680346,10681019,10681219,10682537,10683125,10683366,10683636,10683917,10684416	10654487,10670608,10671203,10671535,10677310,10678704,10679192,10679927,10680443,10681130,10682192,10682704,10683262,10683542,10683789,10683970,10685765	Gene ID= ENSG00000129351.17 TPM= 5.45 Transcript Type= NA
chr19	10653913	10685765	10653913	10685765	+	transcript2521.chr19.nic@ILF3	transcript2521.chr19.nic	protein_coding	10653913,10670516,10670974,10671358,10677163,10679097,10679816,10680346,10681019,10681219,10682537,10683137,10683366,10683636,10683917,10684416	10654487,10670608,10671203,10671535,10677310,10679192,10679927,10680443,10681130,10682192,10682704,10683262,10683542,10683789,10683970,10685765	Gene ID= ENSG00000129351.17 TPM= 3.5 Transcript Type= NA
chr19	10654261	10692417	10654261	10692417	+	ENST00000449870.5@ILF3	ENST00000449870.5	protein_coding	10654261,10670516,10670974,10671358,10677163,10678613,10679097,10679816,10680346,10681019,10681219,10681993,10682537,10683125,10683366,10683636,10683917,10687346,10688550,10689179	10654487,10670608,10671203,10671535,10677310,10678704,10679192,10679927,10680443,10681130,10681329,10682192,10682704,10683262,10683542,10683789,10683970,10687708,10688678,10692417	Gene ID= ENSG00000129351.17 TPM= 91.27 Transcript Type= protein_coding
chr19	10654328	10685765	10654328	10685765	+	ENST00000407004.7@ILF3	ENST00000407004.7	protein_coding	10654328,10670516,10670974,10671358,10677163,10678613,10679097,10679816,10680346,10681019,10681219,10681993,10682537,10683125,10683366,10683636,10683917,10684416	10654487,10670608,10671203,10671535,10677310,10678704,10679192,10679927,10680443,10681130,10681329,10682192,10682704,10683262,10683542,10683789,10683970,10685765	Gene ID= ENSG00000129351.17 TPM= 25.3 Transcript Type= protein_coding
chr19	10701451	10713365	10701451	10713365	+	ENST00000250237.9@QTRT1	ENST00000250237.9	protein_coding	10701451,10701950,10702116,10707302,10707500,10712161,10712553,10712758,10712953,10713118	10701703,10702018,10702254,10707380,10707615,10712299,10712628,10712867,10713040,10713365	Gene ID= ENSG00000213339.8 TPM= 33.86 Transcript Type= protein_coding
chr19	10701430	10713345	10701430	10713345	+	ENST00000589488.5@QTRT1	ENST00000589488.5	protein_coding	10701430,10701950,10702116,10707302,10707500,10712161,10712758,10712953,10713118	10701703,10702018,10702254,10707380,10707615,10712628,10712867,10713040,10713345	Gene ID= ENSG00000213339.8 TPM= 18.68 Transcript Type= retained_intron
chr19	10717974	10831903	10717974	10831903	+	transcript2544.chr19.nic@DNM2	transcript2544.chr19.nic	protein_coding	10717974,10759738,10772479,10775703,10777118,10782960,10786564,10793720,10795372,10798486,10802288,10805916,10808569,10812264,10819980,10823788,10825057,10829036,10830127,10830978	10718403,10759811,10772628,10775906,10777216,10783120,10786706,10793855,10796199,10798572,10802358,10805967,10808580,10812377,10820089,10823899,10825221,10829268,10830378,10831903	Gene ID= ENSG00000079805.16 TPM= 45.3 Transcript Type= NA
chr19	10718093	10831884	10718093	10831884	+	ENST00000359692.10@DNM2	ENST00000359692.10	protein_coding	10718093,10759738,10772479,10775703,10777118,10782960,10786564,10793720,10795372,10796061,10798486,10802288,10805916,10812264,10819980,10823788,10825057,10829036,10830127,10830978	10718403,10759811,10772628,10775906,10777216,10783120,10786706,10793855,10795439,10796199,10798572,10802358,10805967,10812377,10820089,10823899,10825221,10829268,10830378,10831884	Gene ID= ENSG00000079805.16 TPM= 88.02 Transcript Type= protein_coding
chr19	10718131	10831903	10718131	10831903	+	ENST00000389253.8@DNM2	ENST00000389253.8	protein_coding	10718131,10759738,10772479,10775703,10777118,10782960,10786564,10793720,10795372,10797380,10798486,10802288,10805916,10808569,10812264,10819980,10823788,10825057,10829036,10830127,10830978	10718403,10759811,10772628,10775906,10777216,10783120,10786706,10793855,10795439,10797518,10798572,10802358,10805967,10808580,10812377,10820089,10823899,10825221,10829268,10830378,10831903	Gene ID= ENSG00000079805.16 TPM= 141.34 Transcript Type= protein_coding
chr19	10718163	10831895	10718163	10831895	+	ENST00000355667.10@DNM2	ENST00000355667.10	protein_coding	10718163,10759738,10772479,10775703,10777118,10782960,10786564,10793720,10795372,10796061,10798486,10802288,10805916,10808569,10812264,10819980,10823788,10825057,10829036,10830127,10830978	10718403,10759811,10772628,10775906,10777216,10783120,10786706,10793855,10795439,10796199,10798572,10802358,10805967,10808580,10812377,10820089,10823899,10825221,10829268,10830378,10831895	Gene ID= ENSG00000079805.16 TPM= 81.4 Transcript Type= protein_coding
chr19	10760829	10762330	10760829	10762330	-	transcript2571.chr19.nnic@NA	transcript2571.chr19.nnic	NA	10760829	10762330	Gene ID= novel_gene_chr19_2572 TPM= 33.86 Transcript Type= NA
chr19	10810652	10813838	10810652	10813838	+	transcript2567.chr19.nnic@NA	transcript2567.chr19.nnic	NA	10810652	10813838	Gene ID= novel_gene_chr19_2568 TPM= 4.67 Transcript Type= NA
chr19	10832438	10836290	10832438	10836290	-	ENST00000214869.6@TMED1	ENST00000214869.6	protein_coding	10836009,10835256,10834934,10832438	10836290,10835353,10835117,10833213	Gene ID= ENSG00000099203.6 TPM= 45.54 Transcript Type= protein_coding
chr19	10848402	10869790	10848402	10869790	+	ENST00000397820.4@C19orf38	ENST00000397820.4	protein_coding	10848402,10850259,10856265,10858316,10859915,10863170,10869218	10848539,10850567,10856357,10858343,10859958,10863207,10869790	Gene ID= ENSG00000214212.8 TPM= 9.34 Transcript Type= protein_coding
chr19	10871513	10923070	10871513	10923070	+	ENST00000327064.8@CARM1	ENST00000327064.8	protein_coding	10871513,10904951,10908039,10909103,10912184,10913877,10916407,10916696,10919595,10919877,10920436,10920659,10920834,10921050,10921375,10921615	10871922,10905076,10908145,10909207,10912294,10914054,10916497,10916777,10919680,10919966,10920573,10920748,10920946,10921127,10921443,10923070	Gene ID= ENSG00000142453.11 TPM= 5.84 Transcript Type= protein_coding
chr19	10871703	10922721	10871703	10922721	+	ENST00000344150.8@CARM1	ENST00000344150.8	protein_coding	10871703,10904951,10908039,10909103,10912184,10913877,10916407,10916696,10919595,10919877,10920436,10920659,10920834,10921050,10921615	10871922,10905076,10908145,10909207,10912294,10914054,10916497,10916777,10919680,10919966,10920573,10920748,10920946,10921127,10922721	Gene ID= ENSG00000142453.11 TPM= 4.67 Transcript Type= protein_coding
chr19	10922196	10928662	10922196	10928662	-	transcript2590.chr19.nic@YIPF2	transcript2590.chr19.nic	protein_coding	10928585,10928380,10927799,10927630,10925686,10924076,10923833,10923495,10923272,10922196	10928662,10928440,10927959,10927716,10925773,10924192,10923999,10923677,10923407,10923191	Gene ID= ENSG00000130733.10 TPM= 2.92 Transcript Type= NA
chr19	10922768	10928653	10922768	10928653	-	ENST00000586748.5@YIPF2	ENST00000586748.5	protein_coding	10928511,10928380,10927799,10927630,10925686,10924076,10923833,10923495,10923272,10922768	10928653,10928440,10927959,10927716,10925773,10924192,10923999,10923677,10923407,10923174	Gene ID= ENSG00000130733.10 TPM= 7.01 Transcript Type= protein_coding
chr19	10923038	10928634	10923038	10928634	-	transcript2604.chr19.nic@YIPF2	transcript2604.chr19.nic	protein_coding	10928511,10928380,10927799,10925686,10924076,10923833,10923495,10923272,10923038	10928634,10928440,10927959,10925773,10924192,10923999,10923677,10923407,10923174	Gene ID= ENSG00000130733.10 TPM= 2.34 Transcript Type= NA
chr19	10922185	10928681	10922185	10928681	-	ENST00000253031.6@YIPF2	ENST00000253031.6	protein_coding	10928585,10928380,10927799,10927630,10925686,10924076,10923833,10923495,10923272,10922185	10928681,10928440,10927959,10927716,10925773,10924192,10923999,10923677,10923407,10923174	Gene ID= ENSG00000130733.10 TPM= 29.77 Transcript Type= protein_coding
chr19	10928733	10930254	10928733	10930254	+	ENST00000270502.6@TIMM29	ENST00000270502.6	protein_coding	10928733,10929014	10928916,10930254	Gene ID= ENSG00000142444.6 TPM= 22.18 Transcript Type= protein_coding
chr19	10960877	11062276	10960877	11062276	+	transcript2620.chr19.nic@SMARCA4	transcript2620.chr19.nic	protein_coding	10960877,10984121,10985273,10986189,10986905,10987666,10989317,10991150,10994828,10996213,10996494,11003029,11003340,11007902,11010381,11012949,11018957,11019591,11021725,11023518,11024331,11025422,11026300,11027784,11030730,11033290,11034123,11034914,11041307,11058255,11058788,11059753,11060045,11061784	10961174,10984373,10985405,10986593,10987003,10987924,10989443,10991323,10995001,10996380,10996544,11003159,11003397,11008023,11010531,11013112,11019023,11019701,11021967,11023631,11024438,11025508,11026346,11027950,11030893,11033517,11034200,11035132,11041560,11058363,11058889,11059885,11060187,11062276	Gene ID= ENSG00000127616.17 TPM= 20.63 Transcript Type= NA
chr19	10961001	11062282	10961001	11062282	+	ENST00000429416.7@SMARCA4	ENST00000429416.7	protein_coding	10961001,10980777,10984121,10985273,10986189,10986905,10987666,10989317,10991150,10994828,10996213,10996494,11003029,11003340,11007902,11010381,11012949,11018957,11019591,11021725,11023518,11024331,11025422,11026300,11027784,11030730,11033290,11033767,11034123,11034914,11041307,11058255,11058788,11059753,11060045,11061784	10961174,10980852,10984373,10985405,10986593,10987003,10987924,10989443,10991323,10995001,10996380,10996544,11003159,11003397,11008023,11010531,11013112,11019023,11019701,11021967,11023631,11024438,11025508,11026346,11027950,11030893,11033517,11033865,11034200,11035132,11041560,11058363,11058889,11059885,11060187,11062282	Gene ID= ENSG00000127616.17 TPM= 7.79 Transcript Type= protein_coding
chr19	10961001	11062059	10961001	11062059	+	ENST00000344626.8@SMARCA4	ENST00000344626.8	protein_coding	10961001,10984121,10985273,10986189,10986905,10987666,10989317,10991150,10994828,10996213,10996494,11003029,11003340,11007902,11010381,11012949,11018957,11019591,11021725,11023518,11024331,11025422,11026300,11027784,11030730,11033290,11033767,11034123,11034914,11041307,11058255,11058788,11059753,11060045,11061784	10961174,10984373,10985405,10986593,10987003,10987924,10989443,10991323,10995001,10996380,10996544,11003159,11003397,11008023,11010531,11013112,11019023,11019701,11021967,11023631,11024438,11025508,11026346,11027950,11030893,11033517,11033865,11034200,11035132,11041560,11058363,11058889,11059885,11060187,11062059	Gene ID= ENSG00000127616.17 TPM= 15.38 Transcript Type= protein_coding
chr19	11093418	11095363	11093418	11095363	-	transcript2644.chr19.nnic@NA	transcript2644.chr19.nnic	NA	11093418	11095363	Gene ID= novel_gene_chr19_2645 TPM= 2.34 Transcript Type= NA
chr19	11127240	11127856	11127240	11127856	-	transcript2642.chr19.nnic@NA	transcript2642.chr19.nnic	NA	11127240	11127856	Gene ID= novel_gene_chr19_2643 TPM= 7.01 Transcript Type= NA
chr19	11131637	11133559	11131637	11133559	+	transcript2640.chr19.nnic@NA	transcript2640.chr19.nnic	NA	11131637	11133559	Gene ID= novel_gene_chr19_2641 TPM= 8.17 Transcript Type= NA
chr19	11164267	11197577	11164267	11197577	-	transcript2657.chr19.nic@KANK2	transcript2657.chr19.nic	protein_coding	11197485,11195556,11194475,11192831,11178553,11178345,11176578,11175902,11174473,11172981,11170048,11169877,11164267	11197577,11195820,11194590,11194042,11178720,11178447,11176817,11175989,11174692,11173123,11170248,11169966,11166611	Gene ID= ENSG00000197256.10 TPM= 59.69 Transcript Type= NA
chr19	11164267	11197555	11164267	11197555	-	transcript2659.chr19.nic@KANK2	transcript2659.chr19.nic	protein_coding	11197485,11195556,11194475,11192831,11178553,11178345,11176578,11175902,11174473,11172981,11170048,11169877,11164267	11197555,11195881,11194590,11194042,11178720,11178447,11176817,11175989,11174692,11173123,11170248,11169966,11166611	Gene ID= ENSG00000197256.10 TPM= 15.9 Transcript Type= NA
chr19	11164267	11197560	11164267	11197560	-	transcript2672.chr19.nnic@KANK2	transcript2672.chr19.nnic	protein_coding	11197485,11194475,11192831,11178553,11178345,11176578,11175902,11174473,11172981,11170048,11169877,11164267	11197560,11194590,11194042,11178720,11178447,11176817,11175989,11174692,11173123,11170248,11169966,11166611	Gene ID= ENSG00000197256.10 TPM= 17.07 Transcript Type= NA
chr19	11164267	11197521	11164267	11197521	-	ENST00000586659.5@KANK2	ENST00000586659.5	protein_coding	11197485,11195622,11194475,11192831,11178553,11178345,11176578,11175902,11174473,11172981,11170048,11169877,11164267	11197521,11195820,11194590,11194042,11178720,11178447,11176817,11175989,11174692,11173123,11170248,11169966,11166611	Gene ID= ENSG00000197256.10 TPM= 150.76 Transcript Type= protein_coding
chr19	11199295	11262452	11199295	11262452	-	ENST00000294618.11@DOCK6	ENST00000294618.11	protein_coding	11262397,11253639,11252783,11252482,11252119,11250874,11248066,11245812,11245563,11243802,11243557,11243258,11243059,11242045,11238187,11238045,11237641,11237456,11236793,11236346,11235598,11233203,11228940,11227337,11222993,11222735,11222109,11221851,11217231,11216914,11215801,11215387,11214553,11214275,11213176,11211993,11211776,11208911,11208686,11204200,11204081,11202584,11202394,11201889,11200909,11200716,11200308,11199295	11262452,11253726,11252958,11252550,11252248,11251086,11248151,11245878,11245712,11243882,11243710,11243385,11243152,11242207,11238304,11238115,11237779,11237557,11236879,11236577,11235759,11233366,11229035,11227477,11223106,11222905,11222248,11222020,11217391,11217096,11215927,11215471,11214649,11214409,11213328,11212151,11211876,11209103,11208829,11204331,11204095,11202709,11202483,11202125,11201052,11200822,11200469,11199539	Gene ID= ENSG00000130158.13 TPM= 138.94 Transcript Type= protein_coding
chr19	11229387	11230063	11229387	11230063	+	transcript2684.chr19.nnic@NA	transcript2684.chr19.nnic	NA	11229387	11230063	Gene ID= novel_gene_chr19_2685 TPM= 9.34 Transcript Type= NA
chr19	11322046	11339668	11322046	11339668	-	ENST00000222120.7@RAB3D	ENST00000222120.7	protein_coding	11339469,11337172,11335665,11335447,11322046	11339668,11337460,11335783,11335571,11325585	Gene ID= ENSG00000105514.7 TPM= 88.74 Transcript Type= protein_coding
chr19	11342776	11346305	11342776	11346305	-	ENST00000447337.5@TMEM205	ENST00000447337.5	protein_coding	11346008,11345520,11345252,11342776	11346305,11345628,11345415,11343120	Gene ID= ENSG00000105518.13 TPM= 2.6 Transcript Type= protein_coding
chr19	11342779	11346406	11342779	11346406	-	ENST00000587948.5@TMEM205	ENST00000587948.5	protein_coding	11346334,11345520,11345252,11342779	11346406,11345628,11345415,11343120	Gene ID= ENSG00000105518.13 TPM= 2.6 Transcript Type= protein_coding
chr19	11342778	11346300	11342778	11346300	-	transcript2701.chr19.nnic@TMEM205	transcript2701.chr19.nnic	protein_coding	11346127,11345540,11345252,11342778	11346300,11345737,11345415,11343120	Gene ID= ENSG00000105518.13 TPM= 3.3 Transcript Type= NA
chr19	11342810	11346256	11342810	11346256	-	ENST00000588321.1@TMEM205	ENST00000588321.1	protein_coding	11345238,11342810	11346256,11343100	Gene ID= ENSG00000105518.13 TPM= 9.34 Transcript Type= retained_intron
chr19	11342776	11346300	11342776	11346300	-	ENST00000593256.6@TMEM205	ENST00000593256.6	protein_coding	11346127,11345520,11345252,11342776	11346300,11345628,11345415,11343120	Gene ID= ENSG00000105518.13 TPM= 30.63 Transcript Type= protein_coding
chr19	11342785	11346248	11342785	11346248	-	ENST00000588560.5@TMEM205	ENST00000588560.5	protein_coding	11346127,11345520,11345252,11342785	11346248,11345737,11345415,11343120	Gene ID= ENSG00000105518.13 TPM= 11.94 Transcript Type= protein_coding
chr19	11342778	11346268	11342778	11346268	-	ENST00000586590.5@TMEM205	ENST00000586590.5	protein_coding	11346208,11345520,11345252,11342778	11346268,11345628,11345415,11343120	Gene ID= ENSG00000105518.13 TPM= 8.44 Transcript Type= protein_coding
chr19	11345301	11354944	11345301	11354944	+	ENST00000588790.5@CCDC159	ENST00000588790.5	protein_coding	11345301,11345962,11346483,11349654,11349938,11350118,11350808,11351906,11352057,11353451,11353792,11354580,11354873	11345381,11346203,11346627,11349687,11350026,11350199,11351003,11351973,11352133,11353572,11353874,11354696,11354944	Gene ID= ENSG00000183401.11 TPM= 7.01 Transcript Type= protein_coding
chr19	11346501	11354943	11346501	11354943	+	transcript2729.chr19.nic@CCDC159	transcript2729.chr19.nic	protein_coding	11346501,11349654,11349938,11350118,11350808,11351906,11352057,11353451,11353792,11354580	11346627,11349687,11350026,11350199,11351003,11351973,11352133,11353572,11353874,11354943	Gene ID= ENSG00000183401.11 TPM= 4.67 Transcript Type= NA
chr19	11355386	11365698	11355386	11365698	+	ENST00000251473.9@PLPPR2	ENST00000251473.9	protein_coding	11355386,11356802,11357660,11359532,11359821,11361217,11362513,11363713,11364161,11364347	11355572,11356976,11357739,11359720,11359956,11361488,11362689,11363819,11364212,11365698	Gene ID= ENSG00000105520.10 TPM= 21.6 Transcript Type= protein_coding
chr19	11355498	11365694	11355498	11365694	+	ENST00000591608.1@PLPPR2	ENST00000591608.1	protein_coding	11355498,11356802,11357660,11359607,11359821,11361217,11362513,11363713,11364161,11364347	11355572,11356976,11357739,11359720,11359956,11361488,11362689,11363835,11364212,11365694	Gene ID= ENSG00000105520.10 TPM= 15.76 Transcript Type= protein_coding
chr19	11374685	11376951	11374685	11376951	+	ENST00000312423.2@SWSAP1	ENST00000312423.2	protein_coding	11374685,11375513	11374929,11376951	Gene ID= ENSG00000173928.2 TPM= 1.17 Transcript Type= protein_coding
chr19	11377205	11384312	11377205	11384312	-	ENST00000222139.10@EPOR	ENST00000222139.10	protein_coding	11384093,11383097,11381930,11381692,11381056,11380884,11378691,11377205	11384312,11383232,11382105,11381849,11381209,11380971,11378778,11378595	Gene ID= ENSG00000187266.13 TPM= 1.17 Transcript Type= protein_coding
chr19	11396663	11419349	11396663	11419349	-	transcript2720.chr19.nic@RGL3	transcript2720.chr19.nic	protein_coding	11419246,11418671,11416836,11416614,11415937,11406722,11406419,11405323,11405147,11402650,11402455,11402215,11402011,11400202,11400040,11399855,11397445,11396663	11419349,11418784,11417059,11416667,11416148,11406864,11406634,11405426,11405231,11402706,11402541,11402247,11402132,11400297,11400108,11399951,11397597,11397358	Gene ID= ENSG00000205517.12 TPM= 2.34 Transcript Type= NA
chr19	11394057	11419342	11394057	11419342	-	ENST00000380456.7@RGL3	ENST00000380456.7	protein_coding	11419246,11418671,11416836,11416614,11415937,11406722,11406419,11405323,11405147,11402650,11402455,11402215,11402011,11400202,11400040,11399855,11397445,11397244,11394057	11419342,11418784,11417059,11416667,11416148,11406864,11406634,11405426,11405231,11402706,11402541,11402247,11402132,11400297,11400108,11399951,11397597,11397358,11394520	Gene ID= ENSG00000205517.12 TPM= 9.34 Transcript Type= protein_coding
chr19	11435606	11450968	11435606	11450968	+	transcript2748.chr19.nic@PRKCSH	transcript2748.chr19.nic	protein_coding	11435606,11436041,11436389,11437876,11438067,11441240,11442386,11445389,11446272,11447074,11447439,11447693,11448222,11448540,11448914,11449076,11449266,11450646	11435706,11436196,11436505,11437971,11438124,11441357,11442515,11445473,11446350,11447160,11447597,11447789,11448291,11448629,11448988,11449175,11449428,11450968	Gene ID= ENSG00000130175.9 TPM= 91.04 Transcript Type= NA
chr19	11435606	11450968	11435606	11450968	+	transcript2762.chr19.nnic@PRKCSH	transcript2762.chr19.nnic	protein_coding	11435606,11436041,11436389,11437876,11438067,11441240,11442386,11445389,11446272,11447074,11447439,11447693,11448222,11448540,11448914,11449266,11450646	11435706,11436196,11436505,11437971,11438124,11441357,11442515,11445473,11446350,11447160,11447597,11447789,11448291,11448629,11448980,11449428,11450968	Gene ID= ENSG00000130175.9 TPM= 7.58 Transcript Type= NA
chr19	11435635	11450968	11435635	11450968	+	ENST00000592741.5@PRKCSH	ENST00000592741.5	protein_coding	11435635,11436041,11436389,11437876,11438067,11441240,11442386,11445389,11446272,11447074,11447439,11447693,11448222,11448540,11448914,11449076,11449266,11450646	11435710,11436196,11436505,11437971,11438124,11441357,11442515,11445473,11446350,11447160,11447618,11447789,11448291,11448629,11448988,11449175,11449428,11450968	Gene ID= ENSG00000130175.9 TPM= 47.05 Transcript Type= protein_coding
chr19	11447565	11450968	11447565	11450968	+	ENST00000586486.1@PRKCSH	ENST00000586486.1	protein_coding	11447565,11447723,11448222,11448540,11448914,11449076,11449266,11450429	11447618,11447789,11448291,11448629,11448988,11449175,11449882,11450968	Gene ID= ENSG00000130175.9 TPM= 9.07 Transcript Type= nonsense_mediated_decay
chr19	11483427	11505923	11483427	11505923	-	ENST00000293771.9@ZNF653	ENST00000293771.9	protein_coding	11505488,11498296,11495950,11487292,11486987,11486769,11485656,11484042,11483427	11505923,11498339,11496165,11487903,11487158,11486880,11485770,11484141,11483859	Gene ID= ENSG00000161914.9 TPM= 10.51 Transcript Type= protein_coding
chr19	11483427	11505780	11483427	11505780	-	transcript2776.chr19.nic@ZNF653	transcript2776.chr19.nic	protein_coding	11505488,11498296,11495950,11487292,11486987,11486769,11485656,11483427	11505780,11498339,11496165,11487903,11487158,11486880,11485770,11484141	Gene ID= ENSG00000161914.9 TPM= 2.34 Transcript Type= NA
chr19	11505916	11529174	11505916	11529174	-	ENST00000270517.11@ECSIT	ENST00000270517.11	protein_coding	11529062,11519075,11513804,11513056,11507991,11507702,11507457,11505916	11529174,11519193,11514221,11513279,11508048,11507850,11507562,11506428	Gene ID= ENSG00000130159.13 TPM= 86.69 Transcript Type= protein_coding
chr19	11505929	11529150	11505929	11529150	-	transcript2780.chr19.nic@ECSIT	transcript2780.chr19.nic	protein_coding	11529062,11513804,11513056,11507991,11507702,11507457,11505929	11529150,11514221,11513279,11508048,11507850,11507562,11506428	Gene ID= ENSG00000130159.13 TPM= 13.14 Transcript Type= NA
chr19	11505929	11529163	11505929	11529163	-	transcript2781.chr19.nic@ECSIT	transcript2781.chr19.nic	protein_coding	11529062,11519075,11513804,11513056,11507702,11507457,11505929	11529163,11519193,11514221,11513279,11508048,11507562,11506428	Gene ID= ENSG00000130159.13 TPM= 2.63 Transcript Type= NA
chr19	11505929	11529137	11505929	11529137	-	ENST00000252440.11@ECSIT	ENST00000252440.11	protein_coding	11529062,11519075,11513804,11513056,11507991,11507457,11505929	11529137,11519193,11514221,11513279,11508048,11507562,11506428	Gene ID= ENSG00000130159.13 TPM= 1.46 Transcript Type= protein_coding
chr19	11538717	11550323	11538717	11550323	+	ENST00000252456.6@CNN1	ENST00000252456.6	protein_coding	11538717,11541076,11546675,11546832,11547797,11549323,11549550	11538990,11541197,11546741,11546969,11547907,11549469,11550323	Gene ID= ENSG00000130176.7 TPM= 41.45 Transcript Type= protein_coding
chr19	11540243	11550323	11540243	11550323	+	transcript2792.chr19.nic@CNN1	transcript2792.chr19.nic	protein_coding	11540243,11541076,11546675,11546832,11547797,11549323,11549550	11540686,11541197,11546741,11546969,11547907,11549469,11550323	Gene ID= ENSG00000130176.7 TPM= 6.42 Transcript Type= NA
chr19	11553043	11559236	11553043	11559236	-	ENST00000252445.7@ELOF1	ENST00000252445.7	protein_coding	11559191,11554232,11554011,11553043	11559236,11554365,11554081,11553810	Gene ID= ENSG00000130165.10 TPM= 37.36 Transcript Type= protein_coding
chr19	11574660	11578985	11574660	11578985	-	ENST00000218758.9@ACP5	ENST00000218758.9	protein_coding	11578844,11578585,11577593,11577057,11576716,11576243,11574660	11578985,11578657,11577679,11577317,11576843,11576588,11575252	Gene ID= ENSG00000102575.10 TPM= 364.72 Transcript Type= protein_coding
chr19	11574691	11578986	11574691	11578986	-	ENST00000412435.6@ACP5	ENST00000412435.6	protein_coding	11578844,11577593,11577057,11576716,11576243,11574691	11578986,11577679,11577317,11576843,11576588,11575252	Gene ID= ENSG00000102575.10 TPM= 75.16 Transcript Type= protein_coding
chr19	11574692	11578979	11574692	11578979	-	ENST00000592828.5@ACP5	ENST00000592828.5	protein_coding	11578844,11578585,11577593,11577057,11576716,11576243,11574692	11578979,11578764,11577679,11577317,11576843,11576588,11575252	Gene ID= ENSG00000102575.10 TPM= 9.77 Transcript Type= protein_coding
chr19	11597420	11619135	11597420	11619135	+	ENST00000361113.9@ZNF627	ENST00000361113.9	protein_coding	11597420,11614527,11614827,11616695	11597630,11614653,11614887,11619135	Gene ID= ENSG00000198551.9 TPM= 35.03 Transcript Type= protein_coding
chr19	11721265	11738973	11721265	11738973	-	ENST00000341191.10@ZNF823	ENST00000341191.10	protein_coding	11738817,11725201,11724194,11721265	11738973,11725327,11724254,11723342	Gene ID= ENSG00000197933.12 TPM= 18.68 Transcript Type= protein_coding
chr19	11766993	11784078	11766993	11784078	+	transcript2827.chr19.nic@ZNF441	transcript2827.chr19.nic	protein_coding	11766993,11777611,11780019	11767196,11778393,11784078	Gene ID= ENSG00000197044.10 TPM= 3.5 Transcript Type= NA
chr19	11767092	11784078	11767092	11784078	+	ENST00000357901.4@ZNF441	ENST00000357901.4	protein_coding	11767092,11777611,11778330,11780019	11767196,11777737,11778393,11784078	Gene ID= ENSG00000197044.10 TPM= 8.17 Transcript Type= protein_coding
chr19	11848731	11869482	11848731	11869482	+	transcript2833.chr19.nnic@ZNF439	transcript2833.chr19.nnic	protein_coding	11848731,11866205,11866537,11867306	11848930,11866331,11866597,11869482	Gene ID= ENSG00000171291.8 TPM= 7.01 Transcript Type= NA
chr19	11848742	11869482	11848742	11869482	+	transcript2835.chr19.nnic@ZNF439	transcript2835.chr19.nnic	protein_coding	11848742,11866205,11866537,11867306	11849313,11866331,11866597,11869482	Gene ID= ENSG00000171291.8 TPM= 3.5 Transcript Type= NA
chr19	11848726	11851110	11848726	11851110	+	ENST00000592495.1@ZNF439	ENST00000592495.1	protein_coding	11848726	11851110	Gene ID= ENSG00000171291.8 TPM= 2.34 Transcript Type= retained_intron
chr19	11887784	11906267	11887784	11906267	+	ENST00000429654.6@ZNF69	ENST00000429654.6	protein_coding	11887784,11903573,11903905,11904649	11887986,11903699,11903965,11906267	Gene ID= ENSG00000198429.9 TPM= 1.17 Transcript Type= protein_coding
chr19	11925068	11950763	11925068	11950763	+	ENST00000254321.9@ZNF700	ENST00000254321.9	protein_coding	11925068,11947181,11947514,11948276	11925273,11947307,11947574,11950763	Gene ID= ENSG00000196757.7 TPM= 2.34 Transcript Type= protein_coding
chr19	11965054	11980381	11965054	11980381	+	ENST00000343949.9@ZNF763	ENST00000343949.9	protein_coding	11965054,11977029,11977371,11978116	11965211,11977164,11977431,11980381	Gene ID= ENSG00000197054.11 TPM= 1.17 Transcript Type= protein_coding
chr19	12014732	12035688	12014732	12035688	-	ENST00000419886.6@ZNF433	ENST00000419886.6	protein_coding	12035537,12034828,12018166,12017876,12014732	12035688,12034874,12018292,12017936,12016666	Gene ID= ENSG00000197647.11 TPM= 3.5 Transcript Type= protein_coding
chr19	12064699	12081565	12064699	12081565	+	ENST00000439326.7@ZNF844	ENST00000439326.7	protein_coding	12064699,12074031,12074361,12075312	12064876,12074157,12074421,12081565	Gene ID= ENSG00000223547.9 TPM= 2.34 Transcript Type= protein_coding
chr19	12092263	12114851	12092263	12114851	+	ENST00000430298.6@ZNF788	ENST00000430298.6	protein_coding	12092263,12110305,12111246	12092470,12110431,12114851	Gene ID= ENSG00000214189.8 TPM= 2.34 Transcript Type= protein_coding
chr19	12131350	12140407	12131350	12140407	-	ENST00000334213.9@ZNF20	ENST00000334213.9	protein_coding	12140180,12135769,12135500,12131350	12140407,12135904,12135560,12133985	Gene ID= ENSG00000132010.15 TPM= 1.17 Transcript Type= protein_coding
chr19	12163064	12189881	12163064	12189881	+	ENST00000343979.5@ZNF136	ENST00000343979.5	protein_coding	12163064,12185785,12186114,12186570	12163206,12185911,12186174,12189881	Gene ID= ENSG00000196646.11 TPM= 9.34 Transcript Type= protein_coding
chr19	12243131	12246511	12243131	12246511	-	transcript2881.chr19.nnic@NA	transcript2881.chr19.nnic	NA	12243131	12246511	Gene ID= novel_gene_chr19_2882 TPM= 2.34 Transcript Type= NA
chr19	12271812	12294813	12271812	12294813	-	ENST00000356109.9@ZNF44	ENST00000356109.9	protein_coding	12294692,12293232,12275956,12274973,12271812	12294813,12293375,12276082,12275033,12274063	Gene ID= ENSG00000197857.13 TPM= 2.34 Transcript Type= protein_coding
chr19	12292857	12294833	12292857	12294833	-	transcript2887.chr19.nnic@NA	transcript2887.chr19.nnic	NA	12292857	12294833	Gene ID= novel_gene_chr19_2888 TPM= 4.67 Transcript Type= NA
chr19	12318515	12333699	12318515	12333699	-	transcript2889.chr19.nic@ZNF563	transcript2889.chr19.nic	protein_coding	12333480,12322585,12321272,12319430,12318515	12333699,12322711,12321332,12319665,12319311	Gene ID= ENSG00000188868.13 TPM= 2.34 Transcript Type= NA
chr19	12390016	12401271	12390016	12401271	-	ENST00000430385.3@ZNF799	ENST00000430385.3	protein_coding	12401068,12393297,12392603,12390016	12401271,12393423,12392663,12392206	Gene ID= ENSG00000196466.10 TPM= 15.18 Transcript Type= protein_coding
chr19	12429707	12441112	12429707	12441112	-	ENST00000301547.9@ZNF443	ENST00000301547.9	protein_coding	12440912,12433071,12432377,12429707	12441112,12433197,12432437,12431980	Gene ID= ENSG00000180855.15 TPM= 2.34 Transcript Type= protein_coding
chr19	12428226	12433864	12428226	12433864	-	transcript2897.chr19.nnic@ZNF443	transcript2897.chr19.nnic	protein_coding	12433071,12432377,12428226	12433864,12432437,12431982	Gene ID= ENSG00000180855.15 TPM= 2.34 Transcript Type= NA
chr19	12461184	12484829	12461184	12484829	-	ENST00000397732.7@ZNF709	ENST00000397732.7	protein_coding	12484655,12466724,12466462,12461184	12484829,12466850,12466519,12465733	Gene ID= ENSG00000242852.6 TPM= 3.5 Transcript Type= protein_coding
chr19	12525720	12551506	12525720	12551506	-	transcript2916.chr19.nic@ZNF564	transcript2916.chr19.nic	protein_coding	12550463,12528570,12528304,12525720	12551506,12528696,12528364,12527916	Gene ID= ENSG00000249709.7 TPM= 2.34 Transcript Type= NA
chr19	12525370	12551529	12525370	12551529	-	ENST00000339282.11@ZNF564	ENST00000339282.11	protein_coding	12551330,12528570,12528304,12525370	12551529,12528696,12528364,12527916	Gene ID= ENSG00000249709.7 TPM= 1.17 Transcript Type= protein_coding
chr19	12577961	12610803	12577961	12610803	-	ENST00000311437.10@ZNF490	ENST00000311437.10	protein_coding	12610564,12609158,12583430,12582850,12577961	12610803,12609202,12583556,12582910,12581724	Gene ID= ENSG00000188033.9 TPM= 5.84 Transcript Type= protein_coding
chr19	12646513	12666742	12646513	12666742	-	ENST00000456935.6@MAN2B1	ENST00000456935.6	protein_coding	12666543,12665703,12665352,12664792,12663703,12663317,12661260,12658428,12658224,12658063,12657446,12656949,12656571,12655694,12652363,12652153,12650104,12649913,12649341,12649136,12648175,12647443,12647233,12646513	12666742,12665805,12665525,12664985,12663835,12663462,12661376,12658510,12658344,12658141,12657555,12657056,12656687,12655879,12652460,12652270,12650222,12650014,12649428,12649216,12648402,12647598,12647335,12646732	Gene ID= ENSG00000104774.12 TPM= 282.56 Transcript Type= protein_coding
chr19	12666800	12675832	12666800	12675832	+	ENST00000418543.7@WDR83	ENST00000418543.7	protein_coding	12666800,12668508,12669755,12669977,12670180,12670563,12670695,12672847,12673008,12673202,12675523	12666992,12668627,12669893,12670097,12670285,12670611,12670821,12672914,12673116,12673316,12675832	Gene ID= ENSG00000123154.11 TPM= 9.34 Transcript Type= protein_coding
chr19	12669724	12675832	12669724	12675832	+	transcript2937.chr19.nic@WDR83	transcript2937.chr19.nic	protein_coding	12669724,12669977,12670180,12670563,12670695,12672847,12673008,12673202,12675523	12669893,12670097,12670285,12670611,12670821,12672914,12673116,12673316,12675832	Gene ID= ENSG00000123154.11 TPM= 2.34 Transcript Type= NA
chr19	12666802	12675791	12666802	12675791	+	ENST00000546754.5@WDR83	ENST00000546754.5	protein_coding	12666802,12668508,12669755,12670180,12670563,12670695,12672847,12673008,12673202,12675523	12666992,12668627,12670080,12670285,12670611,12670821,12672914,12673116,12673316,12675791	Gene ID= ENSG00000123154.11 TPM= 1.17 Transcript Type= retained_intron
chr19	12668071	12671356	12668071	12671356	-	ENST00000596731.5@WDR83OS	ENST00000596731.5	protein_coding	12669354,12669128,12668520,12668071	12671356,12669233,12668617,12668425	Gene ID= ENSG00000105583.9 TPM= 120.26 Transcript Type= protein_coding
chr19	12675721	12681902	12675721	12681902	-	ENST00000210060.11@DHPS	ENST00000210060.11	protein_coding	12681560,12680161,12679801,12679623,12679457,12677291,12677108,12676017,12675721	12681902,12680325,12679922,12679719,12679543,12677396,12677211,12676142,12675933	Gene ID= ENSG00000095059.15 TPM= 66.35 Transcript Type= protein_coding
chr19	12675717	12681891	12675717	12681891	-	transcript2946.chr19.nic@DHPS	transcript2946.chr19.nic	protein_coding	12681560,12680161,12679801,12679623,12679457,12677291,12676017,12675717	12681891,12680325,12679922,12679719,12679543,12677396,12677211,12675933	Gene ID= ENSG00000095059.15 TPM= 3.89 Transcript Type= NA
chr19	12675717	12681891	12675717	12681891	-	transcript2952.chr19.nic@DHPS	transcript2952.chr19.nic	protein_coding	12681560,12680161,12679801,12679623,12679457,12676017,12675717	12681891,12680325,12679922,12679719,12679543,12677396,12675933	Gene ID= ENSG00000095059.15 TPM= 9.73 Transcript Type= NA
chr19	12675762	12681860	12675762	12681860	-	ENST00000601537.5@DHPS	ENST00000601537.5	protein_coding	12681560,12680161,12679801,12679623,12679457,12677291,12676017,12675762	12681860,12680325,12679922,12679719,12679543,12677396,12676142,12675933	Gene ID= ENSG00000095059.15 TPM= 10.51 Transcript Type= nonsense_mediated_decay
chr19	12675743	12681206	12675743	12681206	-	ENST00000594424.5@DHPS	ENST00000594424.5	protein_coding	12681033,12680161,12679801,12679623,12679457,12677291,12677108,12676017,12675743	12681206,12680325,12679922,12679719,12679543,12677396,12677211,12676142,12675933	Gene ID= ENSG00000095059.15 TPM= 1.75 Transcript Type= protein_coding
chr19	12688917	12696643	12688917	12696643	-	ENST00000393261.7@FBXW9	ENST00000393261.7	protein_coding	12696173,12694799,12694594,12691342,12691166,12689962,12689761,12689541,12689372,12688917	12696643,12694938,12694722,12691454,12691257,12690110,12689874,12689630,12689437,12689290	Gene ID= ENSG00000132004.12 TPM= 18.68 Transcript Type= protein_coding
chr19	12700746	12722572	12700746	12722572	-	transcript2971.chr19.nnic@TNPO2	transcript2971.chr19.nnic	protein_coding	12722477,12720879,12719261,12719029,12715633,12715405,12715243,12715047,12714821,12711553,12711296,12710621,12706570,12706196,12705682,12705492,12705240,12703714,12703428,12702823,12702072,12701752,12701598,12701326,12700746	12722572,12720990,12719336,12719178,12715739,12715542,12715324,12715171,12714941,12711613,12711461,12710773,12706795,12706370,12705768,12705599,12705398,12703801,12703529,12702918,12702147,12701853,12701672,12701455,12701245	Gene ID= ENSG00000105576.15 TPM= 16.73 Transcript Type= NA
chr19	12701153	12722572	12701153	12722572	-	ENST00000592287.5@TNPO2	ENST00000592287.5	protein_coding	12722477,12720879,12719261,12719029,12715633,12715405,12715243,12715047,12714821,12711553,12711296,12710621,12706570,12706196,12705682,12705492,12705240,12703714,12703428,12702823,12702072,12701752,12701598,12701326,12701153	12722572,12720990,12719336,12719178,12715739,12715538,12715324,12715169,12714939,12711613,12711461,12710773,12706795,12706367,12705768,12705599,12705398,12703801,12703526,12702918,12702177,12701851,12701672,12701453,12701243	Gene ID= ENSG00000105576.15 TPM= 136.99 Transcript Type= protein_coding
chr19	12730640	12734775	12730640	12734775	-	ENST00000242784.4@TRIR	ENST00000242784.4	protein_coding	12734313,12731344,12730640	12734775,12731421,12731068	Gene ID= ENSG00000123144.10 TPM= 235.85 Transcript Type= protein_coding
chr19	12730640	12734657	12730640	12734657	-	ENST00000591254.1@TRIR	ENST00000591254.1	protein_coding	12734313,12731344,12730640	12734657,12731557,12731068	Gene ID= ENSG00000123144.10 TPM= 21.02 Transcript Type= nonsense_mediated_decay
chr19	12733082	12734675	12733082	12734675	-	transcript3004.chr19.nnic@NA	transcript3004.chr19.nnic	NA	12733082	12734675	Gene ID= novel_gene_chr19_3005 TPM= 2.34 Transcript Type= NA
chr19	12763004	12775620	12763004	12775620	-	ENST00000264827.9@HOOK2	ENST00000264827.9	protein_coding	12775405,12774812,12774669,12772994,12772780,12772613,12772190,12771397,12771159,12770932,12769881,12768013,12767816,12767395,12766103,12765927,12765690,12764999,12764814,12763668,12763528,12763004	12775620,12774897,12774741,12773044,12772912,12772680,12772252,12771477,12771319,12771072,12770082,12768123,12767903,12767464,12766240,12766014,12765724,12765081,12764917,12763778,12763599,12763431	Gene ID= ENSG00000095066.11 TPM= 83.77 Transcript Type= protein_coding
chr19	12774078	12775544	12774078	12775544	-	ENST00000589134.5@HOOK2	ENST00000589134.5	protein_coding	12775405,12774812,12774078	12775544,12774897,12774741	Gene ID= ENSG00000095066.11 TPM= 8.17 Transcript Type= retained_intron
chr19	12791496	12793315	12791496	12793315	+	ENST00000302754.5@JUNB	ENST00000302754.5	protein_coding	12791496	12793315	Gene ID= ENSG00000171223.5 TPM= 714.57 Transcript Type= protein_coding
chr19	12796820	12801859	12796820	12801859	-	ENST00000301522.2@PRDX2	ENST00000301522.2	protein_coding	12801740,12801159,12800916,12800177,12799859,12796820	12801859,12801270,12801069,12800299,12799989,12797166	Gene ID= ENSG00000167815.11 TPM= 262.71 Transcript Type= protein_coding
chr19	12806580	12813637	12806580	12813637	+	ENST00000221486.4@RNASEH2A	ENST00000221486.4	protein_coding	12806580,12807008,12807206,12807419,12810071,12810317,12813083,12813328	12806800,12807079,12807329,12807506,12810208,12810404,12813206,12813637	Gene ID= ENSG00000104889.5 TPM= 8.17 Transcript Type= protein_coding
chr19	12838534	12874951	12838534	12874951	+	ENST00000251472.8@MAST1	ENST00000251472.8	protein_coding	12838534,12840446,12840991,12843529,12847290,12847612,12847848,12851934,12852115,12852328,12858362,12858531,12864809,12865046,12865316,12865717,12865980,12866653,12867474,12867730,12868643,12869066,12870824,12871036,12873324,12873609	12838655,12840534,12841066,12843607,12847450,12847687,12848057,12852035,12852247,12852395,12858441,12858739,12864947,12865178,12865481,12865818,12866102,12866762,12867652,12867977,12868849,12869295,12870946,12871172,12873511,12874951	Gene ID= ENSG00000105613.9 TPM= 1.17 Transcript Type= protein_coding
chr19	12875211	12881468	12875211	12881468	-	ENST00000222219.7@DNASE2	ENST00000222219.7	protein_coding	12881290,12880972,12880802,12878670,12878382,12875211	12881468,12881152,12880880,12878834,12878579,12876363	Gene ID= ENSG00000105612.8 TPM= 45.54 Transcript Type= protein_coding
chr19	12891026	12899969	12891026	12899969	+	ENST00000222214.9@GCDH	ENST00000222214.9	protein_coding	12891026,12891271,12891487,12891831,12892116,12893483,12895992,12896205,12896910,12897303,12897703,12899468	12891202,12891395,12891522,12891974,12892178,12893653,12896121,12896421,12897013,12897428,12897863,12899969	Gene ID= ENSG00000105607.12 TPM= 26.66 Transcript Type= protein_coding
chr19	12891157	12899969	12891157	12899969	+	transcript3065.chr19.nnic@GCDH	transcript3065.chr19.nnic	protein_coding	12891157,12891271,12891487,12891831,12892116,12893483,12895992,12896205,12896910,12897303,12897703,12899700	12891202,12891395,12891522,12891974,12892178,12893653,12896121,12896421,12897013,12897428,12897863,12899969	Gene ID= ENSG00000105607.12 TPM= 2.72 Transcript Type= NA
chr19	12891157	12899969	12891157	12899969	+	transcript3067.chr19.nic@GCDH	transcript3067.chr19.nic	protein_coding	12891157,12891271,12891487,12891831,12892116,12893483,12895992,12896205,12897303,12897703,12899468	12891202,12891395,12891522,12891974,12892178,12893653,12896121,12897013,12897428,12897863,12899969	Gene ID= ENSG00000105607.12 TPM= 3.3 Transcript Type= NA
chr19	12922480	12933715	12922480	12933715	-	ENST00000314606.8@FARSA	ENST00000314606.8	protein_coding	12933550,12930612,12930429,12930223,12928755,12928535,12928342,12925090,12924904,12924639,12924449,12924151,12922480	12933715,12930749,12930527,12930341,12928847,12928663,12928457,12925174,12925003,12924807,12924526,12924265,12922886	Gene ID= ENSG00000179115.10 TPM= 94.58 Transcript Type= protein_coding
chr19	12938607	12944489	12938607	12944489	+	ENST00000316448.9@CALR	ENST00000316448.9	protein_coding	12938607,12939134,12939428,12940053,12940243,12940541,12940744,12943537,12943713	12938770,12939235,12939631,12940147,12940452,12940654,12940887,12943629,12944489	Gene ID= ENSG00000179218.13 TPM= 1062.31 Transcript Type= protein_coding
chr19	12945833	12953642	12945833	12953642	+	transcript3094.chr19.nic@RAD23A	transcript3094.chr19.nic	protein_coding	12945833,12947848,12948177,12948497,12948686,12952689,12952936	12946020,12948009,12948358,12948552,12949408,12952853,12953642	Gene ID= ENSG00000179262.9 TPM= 8.61 Transcript Type= NA
chr19	12945876	12953623	12945876	12953623	+	ENST00000316856.7@RAD23A	ENST00000316856.7	protein_coding	12945876,12947848,12948177,12948497,12948686,12949081,12949278,12952689,12952936	12946020,12948009,12948358,12948552,12948813,12949159,12949408,12952853,12953623	Gene ID= ENSG00000179262.9 TPM= 75.16 Transcript Type= protein_coding
chr19	12945894	12953613	12945894	12953613	+	ENST00000593114.5@RAD23A	ENST00000593114.5	protein_coding	12945894,12947848,12948177,12948514,12948686,12949081,12949278,12952689,12952936	12946020,12948009,12948358,12948552,12948813,12949159,12949408,12952853,12953613	Gene ID= ENSG00000179262.9 TPM= 1.37 Transcript Type= nonsense_mediated_decay
chr19	12945888	12953642	12945888	12953642	+	ENST00000586534.5@RAD23A	ENST00000586534.5	protein_coding	12945888,12947848,12948177,12948497,12948686,12949081,12949275,12952689,12952936	12946020,12948009,12948358,12948552,12948813,12949159,12949408,12952853,12953642	Gene ID= ENSG00000179262.9 TPM= 28.45 Transcript Type= protein_coding
chr19	12953119	12957236	12953119	12957236	-	ENST00000316939.2@GADD45GIP1	ENST00000316939.2	protein_coding	12956863,12953119	12957236,12954526	Gene ID= ENSG00000179271.2 TPM= 5.84 Transcript Type= protein_coding
chr19	13056183	13058704	13056183	13058704	+	transcript3114.chr19.nnic@NA	transcript3114.chr19.nnic	NA	13056183	13058704	Gene ID= novel_gene_chr19_3115 TPM= 2.34 Transcript Type= NA
chr19	13095770	13097051	13095770	13097051	+	transcript3116.chr19.nnic@NA	transcript3116.chr19.nnic	NA	13095770	13097051	Gene ID= novel_gene_chr19_3117 TPM= 2.34 Transcript Type= NA
chr19	13099033	13102867	13099033	13102867	-	ENST00000264824.4@LYL1	ENST00000264824.4	protein_coding	13102531,13100837,13100657,13099033	13102867,13101195,13100748,13099734	Gene ID= ENSG00000104903.4 TPM= 38.53 Transcript Type= protein_coding
chr19	13104939	13116725	13104939	13116725	-	ENST00000588511.5@TRMT1	ENST00000588511.5	protein_coding	13116653,13115997,13115626,13115279,13112909,13112705,13110158,13109915,13109769,13109550,13109381,13107751,13107574,13105267,13104939	13116725,13116431,13115768,13115466,13113011,13112817,13110306,13110001,13109838,13109684,13109466,13107859,13107650,13105606,13105081	Gene ID= ENSG00000104907.12 TPM= 7.01 Transcript Type= retained_intron
chr19	13118337	13141141	13118337	13141141	+	ENST00000292431.4@NACC1	ENST00000292431.4	protein_coding	13118337,13135200,13136232,13137271,13137478,13138147	13118454,13136153,13136405,13137376,13137575,13141141	Gene ID= ENSG00000160877.5 TPM= 22.18 Transcript Type= protein_coding
chr19	13144062	13150495	13144062	13150495	-	transcript3131.chr19.nnic@STX10	transcript3131.chr19.nnic	protein_coding	13149728,13149499,13149029,13145524,13145288,13144764,13144577,13144062	13150495,13149593,13149091,13145587,13145395,13144870,13144671,13144486	Gene ID= ENSG00000104915.14 TPM= 7.88 Transcript Type= NA
chr19	13144062	13150380	13144062	13150380	-	transcript3138.chr19.nic@STX10	transcript3138.chr19.nic	protein_coding	13149728,13149499,13149029,13145288,13144764,13144577,13144062	13150380,13149593,13149091,13145395,13144870,13144671,13144486	Gene ID= ENSG00000104915.14 TPM= 49.33 Transcript Type= NA
chr19	13144062	13150373	13144062	13150373	-	transcript3142.chr19.nic@STX10	transcript3142.chr19.nic	protein_coding	13149728,13149499,13149029,13145288,13144764,13144062	13150373,13149593,13149091,13145395,13144870,13144671	Gene ID= ENSG00000104915.14 TPM= 12.84 Transcript Type= NA
chr19	13144089	13150238	13144089	13150238	-	ENST00000587230.5@STX10	ENST00000587230.5	protein_coding	13150139,13149728,13149499,13149029,13145288,13144764,13144577,13144089	13150238,13149897,13149593,13149091,13145395,13144870,13144671,13144486	Gene ID= ENSG00000104915.14 TPM= 51.37 Transcript Type= protein_coding
chr19	13144062	13150226	13144062	13150226	-	ENST00000589083.5@STX10	ENST00000589083.5	protein_coding	13150139,13149728,13149499,13149029,13145288,13144764,13144062	13150226,13149897,13149593,13149091,13145395,13144870,13144671	Gene ID= ENSG00000104915.14 TPM= 4.38 Transcript Type= protein_coding
chr19	13151975	13154908	13151975	13154908	+	ENST00000588173.1@IER2	ENST00000588173.1	protein_coding	13151975	13154908	Gene ID= ENSG00000160888.6 TPM= 332.76 Transcript Type= protein_coding
chr19	13731760	13763296	13731760	13763296	+	ENST00000586600.5@CCDC130	ENST00000586600.5	protein_coding	13731760,13732175,13751608,13754289,13756197,13757418,13757786,13758868,13759100,13762299,13762590	13731950,13732285,13751811,13754342,13756279,13757473,13757846,13759010,13759272,13762437,13763296	Gene ID= ENSG00000104957.13 TPM= 5.06 Transcript Type= protein_coding
chr19	13747779	13763292	13747779	13763292	+	ENST00000221554.12@CCDC130	ENST00000221554.12	protein_coding	13747779,13751608,13754289,13756197,13757418,13757786,13758868,13759100,13762299,13762590	13747954,13751811,13754342,13756279,13757473,13757846,13759010,13759272,13762437,13763292	Gene ID= ENSG00000104957.13 TPM= 15.56 Transcript Type= protein_coding
chr19	13747864	13763279	13747864	13763279	+	ENST00000593174.5@CCDC130	ENST00000593174.5	protein_coding	13747864,13751608,13754289,13756197,13757418,13757786,13758868,13762299,13762590	13747954,13751811,13754342,13756279,13757473,13757846,13759272,13762437,13763279	Gene ID= ENSG00000104957.13 TPM= 6.22 Transcript Type= retained_intron
chr19	13764492	13774282	13764492	13774282	+	transcript3169.chr19.nnic@MRI1	transcript3169.chr19.nnic	protein_coding	13764492,13764871,13765954,13768561,13768824,13772121,13773262	13764720,13765109,13766129,13768737,13769048,13772477,13774282	Gene ID= ENSG00000037757.13 TPM= 3.5 Transcript Type= NA
chr19	13764492	13773001	13764492	13773001	+	transcript3175.chr19.nic@MRI1	transcript3175.chr19.nic	protein_coding	13764492,13764871,13765954,13768359,13768824,13772121	13764720,13765109,13766129,13768737,13769048,13773001	Gene ID= ENSG00000037757.13 TPM= 2.34 Transcript Type= NA
chr19	13767038	13773249	13767038	13773249	+	transcript3186.chr19.nic@MRI1	transcript3186.chr19.nic	protein_coding	13767038,13768824,13772121	13768737,13769048,13773249	Gene ID= ENSG00000037757.13 TPM= 9.34 Transcript Type= NA
chr19	13774518	13778461	13774518	13778461	+	ENST00000588858.5@C19orf53	ENST00000588858.5	protein_coding	13774518,13774652,13775471,13778052	13774574,13774707,13775613,13778461	Gene ID= ENSG00000104979.8 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr19	13835367	13837819	13835367	13837819	+	transcript3192.chr19.nnic@NA	transcript3192.chr19.nnic	NA	13835367	13837819	Gene ID= novel_gene_chr19_3193 TPM= 4.67 Transcript Type= NA
chr19	13837774	13841199	13837774	13841199	-	transcript3196.chr19.nnic@NA	transcript3196.chr19.nnic	NA	13837774	13841199	Gene ID= novel_gene_chr19_3197 TPM= 42.03 Transcript Type= NA
chr19	13906201	13930879	13906201	13930879	+	ENST00000318003.11@CC2D1A	ENST00000318003.11	protein_coding	13906201,13909823,13912323,13912528,13913168,13913404,13918070,13918504,13918746,13918912,13919130,13919818,13920557,13920750,13923333,13923548,13923695,13926517,13926667,13926821,13926978,13927175,13927893,13928124,13929379,13929534,13930078,13930242,13930375	13906501,13909958,13912438,13912593,13913302,13913638,13918194,13918576,13918817,13919042,13919202,13919951,13920668,13920922,13923455,13923606,13923811,13926590,13926725,13926872,13927077,13927265,13928030,13928188,13929442,13929660,13930154,13930289,13930879	Gene ID= ENSG00000132024.17 TPM= 78.23 Transcript Type= protein_coding
chr19	13932355	13938390	13932355	13938390	-	transcript3216.chr19.nic@PODNL1	transcript3216.chr19.nic	protein_coding	13938179,13937785,13936367,13933878,13932355	13938390,13938006,13936460,13933993,13933455	Gene ID= ENSG00000132000.11 TPM= 2.34 Transcript Type= NA
chr19	13952472	13961449	13952472	13961449	+	transcript3221.chr19.nnic@DCAF15	transcript3221.chr19.nnic	protein_coding	13952472,13954340,13954526,13955912,13956123,13956352,13959045,13959582,13959767,13959984,13960465,13960940	13952644,13954437,13954661,13956018,13956262,13956522,13959479,13959673,13959895,13960069,13960580,13961449	Gene ID= ENSG00000132017.10 TPM= 3.5 Transcript Type= NA
chr19	13952472	13961449	13952472	13961449	+	transcript3222.chr19.nic@DCAF15	transcript3222.chr19.nic	protein_coding	13952472,13954340,13954526,13955912,13956123,13956352,13959045,13959767,13959984,13960287,13960465,13960940	13952644,13954437,13954661,13956018,13956262,13956522,13959673,13959895,13960069,13960391,13960580,13961449	Gene ID= ENSG00000132017.10 TPM= 2.34 Transcript Type= NA
chr19	13952492	13961449	13952492	13961449	+	ENST00000254337.10@DCAF15	ENST00000254337.10	protein_coding	13952492,13954340,13954526,13955912,13956123,13956352,13959045,13959582,13959767,13959984,13960287,13960465,13960940	13952644,13954437,13954661,13956018,13956262,13956522,13959479,13959673,13959895,13960069,13960391,13960580,13961449	Gene ID= ENSG00000132017.10 TPM= 29.19 Transcript Type= protein_coding
chr19	13961538	14006285	13961538	14006285	-	ENST00000254325.8@RFX1	ENST00000254325.8	protein_coding	14006103,13993525,13983486,13983187,13982121,13980573,13979447,13977992,13972743,13969994,13968775,13968565,13966633,13966421,13965626,13965449,13963858,13963538,13963122,13962994,13961538	14006285,13993895,13983595,13983270,13982228,13980689,13979542,13978086,13973127,13970175,13968894,13968680,13966751,13966530,13965777,13965546,13964007,13963746,13963275,13963039,13962864	Gene ID= ENSG00000132005.8 TPM= 16.35 Transcript Type= protein_coding
chr19	14031748	14053216	14031748	14053216	+	ENST00000263379.3@IL27RA	ENST00000263379.3	protein_coding	14031748,14032386,14039508,14039753,14042453,14042716,14046154,14046430,14048981,14049156,14050758,14051607,14051880,14052096	14031972,14032503,14039665,14039910,14042612,14042789,14046337,14046618,14049082,14049314,14050883,14051700,14051973,14053216	Gene ID= ENSG00000104998.3 TPM= 24.52 Transcript Type= protein_coding
chr19	14072187	14075061	14072187	14075061	+	transcript3246.chr19.nnic@NA	transcript3246.chr19.nnic	NA	14072187	14075061	Gene ID= novel_gene_chr19_3247 TPM= 10.51 Transcript Type= NA
chr19	14072746	14075062	14072746	14075062	+	transcript3244.chr19.nic@MISP3	transcript3244.chr19.nic	protein_coding	14072746,14074390	14073877,14075062	Gene ID= ENSG00000141854.9 TPM= 6.42 Transcript Type= NA
chr19	14072774	14075062	14072774	14075062	+	ENST00000587086.2@MISP3	ENST00000587086.2	protein_coding	14072774,14074390,14074706	14073877,14074463,14075062	Gene ID= ENSG00000141854.9 TPM= 5.25 Transcript Type= protein_coding
chr19	14087840	14091013	14087840	14091013	-	transcript3268.chr19.nic@SAMD1	transcript3268.chr19.nic	protein_coding	14090938,14089785,14089068,14088880,14088671,14087840	14091013,14090575,14089362,14088976,14088782,14088575	Gene ID= ENSG00000141858.11 TPM= 97.49 Transcript Type= NA
chr19	14087840	14090708	14087840	14090708	-	ENST00000533683.6@SAMD1	ENST00000533683.6	protein_coding	14089785,14089068,14088880,14088671,14087840	14090708,14089362,14088976,14088782,14088575	Gene ID= ENSG00000141858.11 TPM= 113.84 Transcript Type= protein_coding
chr19	14091688	14117744	14091688	14117744	-	ENST00000308677.8@PRKACA	ENST00000308677.8	protein_coding	14117502,14107348,14106760,14102816,14100826,14097764,14097579,14097361,14093628,14091688	14117744,14107409,14106888,14102914,14100908,14097890,14097674,14097483,14093792,14093237	Gene ID= ENSG00000072062.13 TPM= 70.06 Transcript Type= protein_coding
chr19	14149953	14206169	14149953	14206169	-	ENST00000361434.7@ADGRL1	ENST00000361434.7	protein_coding	14205985,14183533,14177531,14170682,14162606,14161312,14160593,14160112,14159735,14159401,14159090,14158338,14157882,14157251,14156925,14156658,14156110,14155359,14152784,14152517,14152309,14152133,14149953	14206169,14183697,14177744,14170791,14163406,14161626,14160696,14160297,14159773,14159584,14159215,14158552,14158052,14157460,14157145,14156724,14156201,14155527,14152912,14152613,14152437,14152150,14151615	Gene ID= ENSG00000072071.16 TPM= 35.03 Transcript Type= protein_coding
chr19	14381424	14408725	14381424	14408725	+	transcript3295.chr19.nnic@ADGRE5	transcript3295.chr19.nnic	protein_coding	14381424,14388450,14388702,14390924,14397658,14397889,14398062,14401386,14401653,14402597,14404383,14405748,14406382,14406700,14406869,14407061,14407908,14408092	14381545,14388500,14388818,14391079,14397804,14397935,14398139,14401563,14401760,14402862,14404562,14405912,14406557,14406766,14406960,14407229,14408009,14408725	Gene ID= ENSG00000123146.19 TPM= 14.01 Transcript Type= NA
chr19	14381444	14408721	14381444	14408721	+	ENST00000242786.5@ADGRE5	ENST00000242786.5	protein_coding	14381444,14388450,14388702,14390924,14396342,14397077,14397658,14397889,14398062,14401386,14401653,14402597,14404383,14405748,14406331,14406700,14406869,14407061,14407908,14408092	14381545,14388500,14388818,14391079,14396473,14397223,14397804,14397935,14398139,14401563,14401760,14402862,14404562,14405939,14406557,14406766,14406960,14407229,14408009,14408721	Gene ID= ENSG00000123146.19 TPM= 36.49 Transcript Type= protein_coding
chr19	14381435	14408725	14381435	14408725	+	ENST00000357355.7@ADGRE5	ENST00000357355.7	protein_coding	14381435,14388450,14388702,14390924,14396342,14397658,14397889,14398062,14401386,14401653,14402597,14404383,14405748,14406331,14406700,14406869,14407061,14407908,14408092	14381545,14388500,14388818,14391079,14396473,14397804,14397935,14398139,14401563,14401760,14402862,14404562,14405939,14406557,14406766,14406960,14407229,14408009,14408725	Gene ID= ENSG00000123146.19 TPM= 50.5 Transcript Type= protein_coding
chr19	14404868	14406317	14404868	14406317	-	transcript3348.chr19.nnic@NA	transcript3348.chr19.nnic	NA	14404868	14406317	Gene ID= novel_gene_chr19_3349 TPM= 3.5 Transcript Type= NA
chr19	14408819	14419371	14408819	14419371	-	transcript3307.chr19.nic@DDX39A	transcript3307.chr19.nic	protein_coding	14419270,14413013,14412551,14411506,14410989,14410548,14410216,14409742,14409536,14409303,14409037,14408819	14419371,14413224,14412678,14411598,14411172,14410605,14410334,14409873,14409645,14409447,14409184,14408952	Gene ID= ENSG00000123136.14 TPM= 8.31 Transcript Type= NA
chr19	14408819	14419371	14408819	14419371	-	transcript3312.chr19.nic@DDX39A	transcript3312.chr19.nic	protein_coding	14419270,14413013,14412551,14411506,14410989,14410421,14409742,14409536,14409303,14409037,14408819	14419371,14413224,14412678,14411598,14411172,14410605,14410334,14409645,14409447,14409184,14408952	Gene ID= ENSG00000123136.14 TPM= 9.26 Transcript Type= NA
chr19	14408819	14419371	14408819	14419371	-	transcript3316.chr19.nic@DDX39A	transcript3316.chr19.nic	protein_coding	14419270,14413013,14412551,14411506,14410989,14409742,14409536,14409303,14409037,14408819	14419371,14413224,14412678,14411598,14411172,14410334,14409645,14409447,14409184,14408952	Gene ID= ENSG00000123136.14 TPM= 6.92 Transcript Type= NA
chr19	14408819	14419371	14408819	14419371	-	transcript3320.chr19.nic@DDX39A	transcript3320.chr19.nic	protein_coding	14419270,14413013,14412551,14411506,14410989,14410216,14409742,14409303,14409037,14408819	14419371,14413224,14412678,14411598,14411172,14410334,14409873,14409645,14409184,14408952	Gene ID= ENSG00000123136.14 TPM= 5.98 Transcript Type= NA
chr19	14408819	14419337	14408819	14419337	-	ENST00000589318.5@DDX39A	ENST00000589318.5	protein_coding	14419270,14413013,14412551,14411506,14410989,14409742,14409303,14409037,14408819	14419337,14413224,14412678,14411598,14411172,14410334,14409645,14409184,14408952	Gene ID= ENSG00000123136.14 TPM= 3.89 Transcript Type= retained_intron
chr19	14408851	14419367	14408851	14419367	-	ENST00000242776.8@DDX39A	ENST00000242776.8	protein_coding	14419270,14413013,14412551,14411506,14410989,14410216,14409742,14409536,14409303,14409037,14408851	14419367,14413224,14412678,14411598,14411172,14410334,14409873,14409645,14409447,14409184,14408952	Gene ID= ENSG00000123136.14 TPM= 72.39 Transcript Type= protein_coding
chr19	14408819	14410929	14408819	14410929	-	ENST00000587730.5@DDX39A	ENST00000587730.5	protein_coding	14409742,14409303,14409037,14408819	14410929,14409645,14409184,14408952	Gene ID= ENSG00000123136.14 TPM= 1.54 Transcript Type= retained_intron
chr19	14440260	14471866	14440260	14471866	+	ENST00000342216.8@PKN1	ENST00000342216.8	protein_coding	14440260,14441143,14443470,14446426,14450318,14450896,14451829,14458031,14458232,14463667,14463828,14464060,14467565,14467718,14467876,14469341,14469752,14469912,14470163,14470575,14470771,14471581	14440329,14441443,14443621,14446561,14450463,14451109,14452023,14458140,14458375,14463742,14463969,14464153,14467641,14467793,14467967,14469517,14469814,14469988,14470305,14470682,14470851,14471866	Gene ID= ENSG00000123143.12 TPM= 22.2 Transcript Type= protein_coding
chr19	14433357	14471859	14433357	14471859	+	ENST00000242783.10@PKN1	ENST00000242783.10	protein_coding	14433357,14441143,14443470,14446426,14450318,14450896,14451829,14458031,14458232,14463667,14463828,14464060,14467565,14467718,14467876,14469341,14469752,14469912,14470163,14470575,14470771,14471581	14433542,14441443,14443621,14446561,14450463,14451109,14452023,14458140,14458375,14463742,14463969,14464153,14467641,14467793,14467967,14469517,14469814,14469988,14470305,14470682,14470851,14471859	Gene ID= ENSG00000123143.12 TPM= 573.3 Transcript Type= protein_coding
chr19	14433323	14471867	14433323	14471867	+	ENST00000585839.5@PKN1	ENST00000585839.5	protein_coding	14433323,14441143,14443470,14446426,14450318,14450896,14451829,14458031,14458232,14463667,14463828,14464060,14467565,14467876,14469341,14470163,14470575,14470771,14471581	14433542,14441443,14443621,14446561,14450463,14451109,14452023,14458140,14458375,14463742,14463969,14464153,14467793,14467967,14469988,14470305,14470682,14470851,14471867	Gene ID= ENSG00000123143.12 TPM= 5.17 Transcript Type= retained_intron
chr19	14472466	14475362	14472466	14475362	-	ENST00000292513.3@PTGER1	ENST00000292513.3	protein_coding	14475262,14473379,14472466	14475362,14474337,14472826	Gene ID= ENSG00000160951.3 TPM= 10.51 Transcript Type= protein_coding
chr19	14477762	14496137	14477762	14496137	-	transcript3388.chr19.nic@GIPC1	transcript3388.chr19.nic	protein_coding	14496037,14492857,14491656,14480593,14480305,14479412,14478684,14477762	14496137,14492912,14491743,14480778,14480485,14479524,14478765,14478567	Gene ID= ENSG00000123159.15 TPM= 35.49 Transcript Type= NA
chr19	14477762	14496132	14477762	14496132	-	ENST00000345425.6@GIPC1	ENST00000345425.6	protein_coding	14496037,14482689,14480593,14480305,14479412,14478684,14477762	14496132,14483006,14480778,14480485,14479524,14478765,14478567	Gene ID= ENSG00000123159.15 TPM= 11.68 Transcript Type= protein_coding
chr19	14477762	14496132	14477762	14496132	-	ENST00000393033.8@GIPC1	ENST00000393033.8	protein_coding	14496037,14492857,14491656,14482689,14480593,14480305,14479412,14478684,14477762	14496132,14492912,14491743,14483006,14480778,14480485,14479524,14478765,14478567	Gene ID= ENSG00000123159.15 TPM= 218.34 Transcript Type= protein_coding
chr19	14477760	14496149	14477760	14496149	-	ENST00000393028.5@GIPC1	ENST00000393028.5	protein_coding	14496037,14480593,14480305,14479412,14478684,14477760	14496149,14480778,14480485,14479524,14478765,14478567	Gene ID= ENSG00000123159.15 TPM= 12.14 Transcript Type= protein_coding
chr19	14488883	14489904	14488883	14489904	+	transcript3400.chr19.nnic@NA	transcript3400.chr19.nnic	NA	14488883	14489904	Gene ID= novel_gene_chr19_3401 TPM= 5.84 Transcript Type= NA
chr19	14514770	14518420	14514770	14518420	-	ENST00000254322.2@DNAJB1	ENST00000254322.2	protein_coding	14518139,14516466,14514770	14518420,14517046,14516170	Gene ID= ENSG00000132002.7 TPM= 366.62 Transcript Type= protein_coding
chr19	14529595	14565977	14529595	14565977	+	ENST00000598987.5@TECR	ENST00000598987.5	protein_coding	14529595,14545114,14562525,14563206,14563658,14563800,14563982,14564182,14564786,14564949,14565066,14565202,14565618,14565744	14529711,14545180,14562575,14563257,14563702,14563903,14564097,14564287,14564858,14564992,14565123,14565290,14565663,14565977	Gene ID= ENSG00000099797.13 TPM= 13.43 Transcript Type= nonsense_mediated_decay
chr19	14529560	14565978	14529560	14565978	+	ENST00000215567.9@TECR	ENST00000215567.9	protein_coding	14529560,14562525,14563206,14563658,14563800,14563982,14564182,14564786,14564949,14565066,14565202,14565618,14565744	14529711,14562575,14563257,14563702,14563903,14564097,14564287,14564858,14564992,14565123,14565290,14565663,14565978	Gene ID= ENSG00000099797.13 TPM= 144.82 Transcript Type= protein_coding
chr19	14529594	14565980	14529594	14565980	+	ENST00000600083.5@TECR	ENST00000600083.5	protein_coding	14529594,14562525,14563141,14563658,14563800,14563982,14564182,14564786,14564949,14565066,14565202,14565618,14565744	14529711,14562575,14563257,14563702,14563903,14564097,14564287,14564858,14564992,14565123,14565290,14565663,14565980	Gene ID= ENSG00000099797.13 TPM= 38.09 Transcript Type= protein_coding
chr19	14529592	14565977	14529592	14565977	+	ENST00000596073.5@TECR	ENST00000596073.5	protein_coding	14529592,14562525,14563174,14563658,14563800,14563982,14564182,14564786,14564949,14565066,14565202,14565618,14565744	14529711,14562575,14563257,14563702,14563903,14564097,14564287,14564858,14564992,14565123,14565290,14565663,14565977	Gene ID= ENSG00000099797.13 TPM= 15.76 Transcript Type= protein_coding
chr19	14566078	14572062	14566078	14572062	-	ENST00000215565.2@NDUFB7	ENST00000215565.2	protein_coding	14571889,14566765,14566078	14572062,14566933,14566265	Gene ID= ENSG00000099795.6 TPM= 70.06 Transcript Type= protein_coding
chr19	14619239	14674871	14619239	14674871	-	ENST00000253673.5@ADGRE3	ENST00000253673.5	protein_coding	14674746,14668802,14663418,14661963,14658513,14654982,14651085,14647181,14644108,14641419,14638105,14633236,14632921,14630039,14625492,14619239	14674871,14668852,14663540,14662118,14658550,14655165,14651204,14647365,14644275,14641616,14638340,14633302,14633012,14630207,14625599,14619471	Gene ID= ENSG00000131355.14 TPM= 9.34 Transcript Type= protein_coding
chr19	14690047	14720522	14690047	14720522	+	transcript3444.chr19.nic@ZNF333	transcript3444.chr19.nic	protein_coding	14690047,14693451,14695010,14695566,14699199,14705054,14706686,14715382,14716112,14716994,14717657	14690150,14693494,14695133,14695661,14701897,14705170,14706773,14715470,14716238,14717089,14720522	Gene ID= ENSG00000160961.11 TPM= 2.34 Transcript Type= NA
chr19	14732393	14778537	14732393	14778537	-	ENST00000315576.7@ADGRE2	ENST00000315576.7	protein_coding	14778257,14776726,14774256,14773938,14772342,14766978,14766235,14765658,14765524,14765320,14764433,14756238,14755654,14754954,14752329,14751436,14746896,14746232,14743616,14743420,14732393	14778537,14776927,14774306,14774054,14772497,14767109,14766381,14765804,14765570,14765397,14764610,14756345,14755877,14755127,14752526,14751671,14746962,14746323,14743784,14743530,14736244	Gene ID= ENSG00000127507.17 TPM= 2.34 Transcript Type= protein_coding
chr19	15107403	15114988	15107403	15114988	+	ENST00000342784.6@SYDE1	ENST00000342784.6	protein_coding	15107403,15109056,15109704,15110521,15111313,15111632,15112346,15113560	15107521,15109397,15110348,15110735,15111439,15111792,15112571,15114988	Gene ID= ENSG00000105137.12 TPM= 21.6 Transcript Type= protein_coding
chr19	15107405	15114985	15107405	15114985	+	ENST00000600440.5@SYDE1	ENST00000600440.5	protein_coding	15107405,15109257,15109704,15110521,15111313,15111632,15112346,15113560	15107521,15109397,15110348,15110735,15111439,15111792,15112571,15114985	Gene ID= ENSG00000105137.12 TPM= 11.09 Transcript Type= protein_coding
chr19	15114982	15117871	15114982	15117871	-	transcript3477.chr19.nnic@NA	transcript3477.chr19.nnic	NA	15114982	15117871	Gene ID= novel_gene_chr19_3478 TPM= 2.34 Transcript Type= NA
chr19	15114987	15125670	15114987	15125670	-	transcript3457.chr19.nic@ILVBL	transcript3457.chr19.nic	protein_coding	15125380,15124925,15123375,15123116,15122892,15122693,15119982,15119418,15119166,15117881,15116408,15116152,15116001,15115850,15115566,15114987	15125670,15125069,15123576,15123243,15123030,15122804,15120081,15119515,15119302,15118015,15116522,15116321,15116071,15115921,15115671,15115430	Gene ID= ENSG00000105135.15 TPM= 19.85 Transcript Type= NA
chr19	15114987	15125357	15114987	15125357	-	transcript3461.chr19.nic@ILVBL	transcript3461.chr19.nic	protein_coding	15124925,15123375,15123116,15122892,15122693,15119982,15119418,15119166,15117881,15116408,15116152,15116001,15115850,15115566,15114987	15125357,15123576,15123243,15123030,15122804,15120081,15119515,15119302,15118015,15116522,15116321,15116071,15115921,15115671,15115430	Gene ID= ENSG00000105135.15 TPM= 11.68 Transcript Type= NA
chr19	15114987	15125785	15114987	15125785	-	ENST00000263383.7@ILVBL	ENST00000263383.7	protein_coding	15125656,15124925,15123375,15123116,15122892,15122693,15119982,15119418,15119166,15117881,15116408,15116152,15116001,15115850,15115566,15114987	15125785,15125069,15123576,15123243,15123030,15122804,15120081,15119515,15119302,15118015,15116522,15116321,15116071,15115921,15115671,15115430	Gene ID= ENSG00000105135.15 TPM= 142.45 Transcript Type= protein_coding
chr19	15159038	15200981	15159038	15200981	-	ENST00000263388.6@NOTCH3	ENST00000263388.6	protein_coding	15200788,15197500,15192377,15191960,15191745,15191424,15189273,15188989,15188235,15187881,15187105,15186878,15185487,15185257,15184906,15184295,15181576,15180961,15180681,15180072,15179364,15179025,15178823,15177525,15174068,15170671,15170331,15170086,15167249,15165787,15165368,15162465,15159038	15200981,15197578,15192519,15192298,15191867,15191657,15189428,15189174,15188348,15187994,15187338,15186988,15185679,15185408,15185019,15184450,15181801,15181162,15180828,15180256,15179496,15179282,15178941,15178090,15174400,15170825,15170553,15170170,15167411,15166091,15165515,15162562,15161714	Gene ID= ENSG00000074181.8 TPM= 112.09 Transcript Type= protein_coding
chr19	15226919	15232432	15226919	15232432	-	ENST00000221730.7@EPHX3	ENST00000221730.7	protein_coding	15231969,15231776,15231239,15230962,15227997,15227771,15226919	15232432,15231861,15231396,15231090,15228100,15227907,15227662	Gene ID= ENSG00000105131.7 TPM= 5.84 Transcript Type= protein_coding
chr19	15232977	15234073	15232977	15234073	+	transcript3488.chr19.nnic@NA	transcript3488.chr19.nnic	NA	15232977	15234073	Gene ID= novel_gene_chr19_3489 TPM= 2.34 Transcript Type= NA
chr19	15235519	15280451	15235519	15280451	-	ENST00000263377.6@BRD4	ENST00000263377.6	protein_coding	15280264,15272815,15268905,15267416,15265354,15264404,15263420,15256964,15256064,15255297,15254152,15244710,15244231,15242900,15239910,15239659,15239392,15239059,15238743,15235519	15280451,15273133,15269042,15267551,15265643,15264766,15263548,15257173,15256263,15255592,15254262,15244762,15244600,15243487,15240022,15239821,15239522,15239264,15238980,15238445	Gene ID= ENSG00000141867.17 TPM= 42.03 Transcript Type= protein_coding
chr19	15252992	15332545	15252992	15332545	-	ENST00000360016.9@BRD4	ENST00000360016.9	protein_coding	15332290,15272815,15268905,15267416,15265354,15264404,15263420,15256964,15256064,15255297,15254152,15252992	15332545,15273133,15269042,15267551,15265643,15264766,15263548,15257173,15256263,15255592,15254262,15253783	Gene ID= ENSG00000141867.17 TPM= 33.86 Transcript Type= protein_coding
chr19	15258619	15262191	15258619	15262191	-	transcript3537.chr19.nnic@NA	transcript3537.chr19.nnic	NA	15258619	15262191	Gene ID= novel_gene_chr19_3538 TPM= 4.67 Transcript Type= NA
chr19	15353385	15379792	15353385	15379792	-	ENST00000269701.6@AKAP8	ENST00000269701.6	protein_coding	15379713,15376976,15374603,15373786,15372851,15372218,15371952,15370146,15368235,15362110,15361729,15360848,15358967,15353385	15379792,15377014,15374635,15374065,15373340,15372347,15371998,15370179,15368322,15362251,15361822,15360978,15359062,15355370	Gene ID= ENSG00000105127.8 TPM= 4.67 Transcript Type= protein_coding
chr19	15353521	15373151	15353521	15373151	-	ENST00000598597.6@AKAP8	ENST00000598597.6	protein_coding	15372851,15372218,15371952,15370146,15369067,15368235,15362110,15361729,15360848,15358967,15353521	15373151,15372347,15371998,15370179,15369224,15368322,15362251,15361822,15360978,15359062,15355370	Gene ID= ENSG00000105127.8 TPM= 5.84 Transcript Type= nonsense_mediated_decay
chr19	15380050	15419030	15380050	15419030	-	transcript3495.chr19.nic@AKAP8L	transcript3495.chr19.nic	protein_coding	15418911,15410520,15404010,15403475,15401150,15400947,15400794,15400295,15399302,15398630,15397714,15397520,15397150,15380517,15380050	15419030,15410594,15404042,15403715,15401603,15401043,15400864,15400358,15399410,15398766,15397855,15397625,15397280,15380612,15380430	Gene ID= ENSG00000011243.17 TPM= 7.88 Transcript Type= NA
chr19	15380050	15419030	15380050	15419030	-	transcript3496.chr19.nic@AKAP8L	transcript3496.chr19.nic	protein_coding	15418911,15410520,15404010,15403658,15403475,15401150,15400947,15400794,15400295,15399302,15397714,15397520,15397150,15380517,15380050	15419030,15410594,15404042,15403715,15403555,15401603,15401043,15400864,15400358,15399410,15397855,15397625,15397280,15380612,15380430	Gene ID= ENSG00000011243.17 TPM= 19.56 Transcript Type= NA
chr19	15380048	15419054	15380048	15419054	-	ENST00000397410.9@AKAP8L	ENST00000397410.9	protein_coding	15418911,15410520,15404010,15403475,15401150,15400947,15400794,15400295,15399302,15397714,15397520,15397150,15380517,15380048	15419054,15410594,15404042,15403715,15401603,15401043,15400864,15400358,15399410,15397855,15397625,15397280,15380612,15380430	Gene ID= ENSG00000011243.17 TPM= 65.09 Transcript Type= protein_coding
chr19	15380050	15419030	15380050	15419030	-	transcript3515.chr19.nic@AKAP8L	transcript3515.chr19.nic	protein_coding	15418911,15410520,15404010,15403475,15401150,15400947,15400794,15398630,15397714,15397520,15397150,15380517,15380050	15419030,15410594,15404042,15403715,15401603,15401043,15400864,15400358,15397855,15397625,15397280,15380612,15380430	Gene ID= ENSG00000011243.17 TPM= 5.25 Transcript Type= NA
chr19	15380050	15419030	15380050	15419030	-	transcript3517.chr19.nic@AKAP8L	transcript3517.chr19.nic	protein_coding	15418911,15410520,15404010,15403475,15401150,15400947,15400794,15400295,15397714,15397520,15397150,15380517,15380050	15419030,15410594,15404042,15403715,15401603,15401043,15400864,15400358,15399410,15397625,15397280,15380612,15380430	Gene ID= ENSG00000011243.17 TPM= 35.03 Transcript Type= NA
chr19	15380051	15418988	15380051	15418988	-	ENST00000593845.5@AKAP8L	ENST00000593845.5	protein_coding	15418911,15410520,15404010,15403475,15401150,15400947,15400794,15400295,15398630,15397714,15397520,15397150,15380517,15380051	15418988,15410594,15404042,15403715,15401603,15401043,15400864,15400358,15399410,15397855,15397625,15397280,15380612,15380430	Gene ID= ENSG00000011243.17 TPM= 4.96 Transcript Type= retained_intron
chr19	15422087	15432734	15422087	15432734	-	transcript3540.chr19.nic@WIZ	transcript3540.chr19.nic	protein_coding	15432434,15431012,15429586,15428110,15426982,15425241,15424613,15424183,15422087	15432734,15431182,15430089,15428508,15427533,15425768,15425032,15424378,15423235	Gene ID= ENSG00000011451.17 TPM= 10.51 Transcript Type= NA
chr19	15422087	15432557	15422087	15432557	-	ENST00000599686.3@WIZ	ENST00000599686.3	protein_coding	15432434,15431012,15429586,15426982,15425241,15424613,15424183,15422087	15432557,15431182,15430089,15427533,15425768,15425032,15424378,15423235	Gene ID= ENSG00000011451.17 TPM= 32.69 Transcript Type= protein_coding
chr19	15451630	15464543	15451630	15464543	-	transcript3557.chr19.nnic@RASAL3	transcript3557.chr19.nnic	protein_coding	15464505,15464031,15461471,15461218,15461060,15460203,15458529,15458328,15457292,15456502,15456104,15454657,15454361,15454149,15453107,15452658,15451630	15464543,15464377,15461607,15461296,15461121,15460258,15458655,15458426,15457834,15456646,15456248,15454893,15454562,15454267,15453497,15452815,15451938	Gene ID= ENSG00000105122.12 TPM= 3.5 Transcript Type= NA
chr19	15451624	15464571	15451624	15464571	-	ENST00000343625.11@RASAL3	ENST00000343625.11	protein_coding	15464505,15464031,15461471,15461218,15461060,15460203,15458529,15458328,15457292,15456502,15456104,15454657,15454361,15454149,15453107,15452658,15452045,15451624	15464571,15464377,15461607,15461296,15461121,15460258,15458655,15458426,15457834,15456646,15456248,15454893,15454562,15454267,15453497,15452815,15452108,15451938	Gene ID= ENSG00000105122.12 TPM= 43.2 Transcript Type= protein_coding
chr19	15640900	15662825	15640900	15662825	+	ENST00000221307.12@CYP4F3	ENST00000221307.12	protein_coding	15640900,15641415,15645719,15647052,15647197,15649160,15649913,15652569,15652823,15658264,15658491,15658727,15659220	15640945,15641613,15645863,15647105,15647324,15649281,15650183,15652635,15652952,15658397,15658555,15658809,15662825	Gene ID= ENSG00000186529.15 TPM= 1.17 Transcript Type= protein_coding
chr19	15912367	15934867	15912367	15934867	-	ENST00000248041.12@CYP4F11	ENST00000248041.12	protein_coding	15934832,15934211,15929457,15927430,15927212,15924761,15923812,15922364,15922037,15914762,15914602,15914305,15912367	15934867,15934409,15929601,15927483,15927339,15924882,15924082,15922430,15922166,15914895,15914666,15914387,15913909	Gene ID= ENSG00000171903.16 TPM= 2.34 Transcript Type= protein_coding
chr19	16076306	16103005	16076306	16103005	+	ENST00000300933.8@TPM4	ENST00000300933.8	protein_coding	16076306,16081913,16086423,16088027,16089045,16093536,16093684,16101264	16076697,16082046,16086540,16088097,16089120,16093598,16093753,16103005	Gene ID= ENSG00000167460.14 TPM= 849.37 Transcript Type= protein_coding
chr19	16067507	16101790	16067507	16101790	+	ENST00000344824.10@TPM4	ENST00000344824.10	protein_coding	16067507,16076047,16081913,16086423,16088027,16089045,16093536,16093684,16101264	16067738,16076172,16082046,16086540,16088097,16089120,16093598,16093753,16101790	Gene ID= ENSG00000167460.14 TPM= 2.34 Transcript Type= protein_coding
chr19	16111629	16134234	16111629	16134234	+	ENST00000300935.7@RAB8A	ENST00000300935.7	protein_coding	16111629,16118226,16121750,16125470,16127437,16128026,16129554,16132212	16112025,16118286,16121810,16125547,16127526,16128091,16129604,16134234	Gene ID= ENSG00000167461.11 TPM= 141.28 Transcript Type= protein_coding
chr19	16185418	16192046	16185418	16192046	+	ENST00000263384.11@FAM32A	ENST00000263384.11	protein_coding	16185418,16185624,16190520,16190887	16185516,16185765,16190573,16192046	Gene ID= ENSG00000105058.11 TPM= 141.28 Transcript Type= protein_coding
chr19	16197578	16245907	16197578	16245907	+	ENST00000291439.7@AP1M1	ENST00000291439.7	protein_coding	16197578,16203459,16206341,16208019,16209030,16226421,16227548,16228137,16228770,16233493,16234199,16234413	16198068,16203615,16206408,16208149,16209177,16226547,16227690,16228208,16228928,16233618,16234274,16245907	Gene ID= ENSG00000072958.8 TPM= 4.67 Transcript Type= protein_coding
chr19	16197934	16235345	16197934	16235345	+	ENST00000444449.6@AP1M1	ENST00000444449.6	protein_coding	16197934,16203459,16206341,16208019,16209030,16210360,16226421,16227548,16228137,16228770,16233493,16234199,16234413	16198068,16203615,16206408,16208149,16209177,16210395,16226547,16227690,16228208,16228928,16233618,16234274,16235345	Gene ID= ENSG00000072958.8 TPM= 9.92 Transcript Type= protein_coding
chr19	16324817	16327874	16324817	16327874	+	ENST00000248071.5@KLF2	ENST00000248071.5	protein_coding	16324817,16325216,16326856	16324998,16326032,16327874	Gene ID= ENSG00000127528.5 TPM= 287.03 Transcript Type= protein_coding
chr19	16324822	16327534	16324822	16327534	+	transcript3669.chr19.nic@KLF2	transcript3669.chr19.nic	protein_coding	16324822,16326856	16326032,16327534	Gene ID= ENSG00000127528.5 TPM= 65.97 Transcript Type= NA
chr19	16324822	16327874	16324822	16327874	+	transcript3670.chr19.nic@KLF2	transcript3670.chr19.nic	protein_coding	16324822,16326856	16326032,16327874	Gene ID= ENSG00000127528.5 TPM= 129.4 Transcript Type= NA
chr19	16355239	16472012	16355239	16472012	-	ENST00000455140.6@EPS15L1	ENST00000455140.6	protein_coding	16471913,16442178,16441892,16440862,16437770,16436937,16434365,16428702,16425083,16421319,16417948,16417552,16413773,16404588,16403733,16402321,16395344,16393951,16392304,16386171,16385129,16377122,16361779,16355239	16472012,16442219,16441981,16440909,16437865,16436999,16434490,16428761,16425316,16421476,16418104,16417637,16413845,16404749,16403930,16402485,16395467,16394001,16392440,16386231,16385211,16377254,16361984,16355851	Gene ID= ENSG00000127527.13 TPM= 9.73 Transcript Type= protein_coding
chr19	16355239	16471984	16355239	16471984	-	transcript3625.chr19.nic@EPS15L1	transcript3625.chr19.nic	protein_coding	16471913,16442178,16441892,16440862,16437770,16436937,16434365,16428702,16425083,16421319,16417948,16417552,16413773,16404588,16403733,16402321,16395344,16393951,16392304,16386171,16385129,16377122,16361886,16355239	16471984,16442219,16441981,16440909,16437865,16436999,16434490,16428761,16425316,16421476,16418104,16417637,16413845,16404749,16403930,16402485,16395467,16394001,16392440,16386231,16385211,16377254,16361984,16355851	Gene ID= ENSG00000127527.13 TPM= 3.89 Transcript Type= NA
chr19	16361581	16472085	16361581	16472085	-	ENST00000248070.10@EPS15L1	ENST00000248070.10	protein_coding	16471913,16442178,16441892,16440862,16437770,16436937,16434365,16428702,16425083,16421319,16417948,16417552,16413773,16404588,16403733,16402321,16395344,16393951,16392304,16386171,16385129,16377122,16361581	16472085,16442219,16441981,16440909,16437865,16436999,16434490,16428761,16425316,16421476,16418104,16417637,16413845,16404749,16403930,16402485,16395467,16394001,16392440,16386231,16385211,16377254,16361984	Gene ID= ENSG00000127527.13 TPM= 4.67 Transcript Type= protein_coding
chr19	16355247	16471984	16355247	16471984	-	transcript3631.chr19.nnic@EPS15L1	transcript3631.chr19.nnic	protein_coding	16471913,16442178,16441892,16440862,16437770,16436937,16434365,16428702,16425083,16421319,16417948,16417552,16413773,16404588,16403733,16402321,16395344,16393951,16392304,16386171,16385129,16355247	16471984,16442219,16441981,16440909,16437865,16436999,16434490,16428761,16425316,16421476,16418104,16417637,16413845,16404749,16403930,16402485,16395467,16394001,16392440,16386231,16385211,16355851	Gene ID= ENSG00000127527.13 TPM= 8.56 Transcript Type= NA
chr19	16361597	16471984	16361597	16471984	-	transcript3634.chr19.nic@EPS15L1	transcript3634.chr19.nic	protein_coding	16471913,16442178,16441892,16440885,16437770,16436937,16434365,16428702,16425083,16421319,16417948,16417552,16413773,16404588,16403733,16402321,16395344,16393951,16392304,16386171,16385129,16361597	16471984,16442219,16441981,16440909,16437865,16436999,16434490,16428761,16425316,16421476,16418104,16417637,16413845,16404749,16403930,16402485,16395467,16394001,16392440,16386231,16385211,16361984	Gene ID= ENSG00000127527.13 TPM= 2.34 Transcript Type= NA
chr19	16361597	16471976	16361597	16471976	-	ENST00000535753.6@EPS15L1	ENST00000535753.6	protein_coding	16471913,16442178,16441892,16440862,16437770,16436937,16434365,16428702,16425083,16421319,16417948,16417552,16413773,16404588,16403733,16402321,16395344,16393951,16392304,16386171,16385129,16361597	16471976,16442219,16441981,16440909,16437865,16436999,16434490,16428761,16425316,16421476,16418104,16417637,16413845,16404749,16403930,16402485,16395467,16394001,16392440,16386231,16385211,16361984	Gene ID= ENSG00000127527.13 TPM= 11.68 Transcript Type= protein_coding
chr19	16400631	16471950	16400631	16471950	-	ENST00000597937.5@EPS15L1	ENST00000597937.5	protein_coding	16471913,16442178,16441892,16440862,16437770,16436937,16434365,16428702,16425083,16421319,16417948,16417552,16413773,16404588,16403733,16400631	16471950,16442219,16441981,16440909,16437865,16436999,16434490,16428761,16425316,16421476,16418104,16417637,16413845,16404749,16403930,16402485	Gene ID= ENSG00000127527.13 TPM= 22.18 Transcript Type= protein_coding
chr19	16356329	16358327	16356329	16358327	-	ENST00000623994.1@AC020917.4	ENST00000623994.1	TEC	16356329	16358327	Gene ID= ENSG00000280332.1 TPM= 1.17 Transcript Type= TEC
chr19	16517889	16542530	16517889	16542530	-	ENST00000546361.6@CHERP	ENST00000546361.6	protein_coding	16542354,16541870,16535452,16533011,16532598,16530769,16530585,16529648,16528080,16525242,16523052,16521521,16520826,16520364,16520149,16519621,16517889	16542530,16542043,16535636,16533148,16532749,16530880,16530674,16529900,16528255,16525677,16523290,16521654,16520912,16520507,16520265,16519715,16519352	Gene ID= ENSG00000085872.14 TPM= 32.11 Transcript Type= protein_coding
chr19	16531984	16542457	16531984	16542457	-	transcript3681.chr19.nic@CHERP	transcript3681.chr19.nic	protein_coding	16542354,16541870,16535452,16533011,16531984	16542457,16542043,16535636,16533148,16532749	Gene ID= ENSG00000085872.14 TPM= 2.34 Transcript Type= NA
chr19	16517896	16542415	16517896	16542415	-	ENST00000198939.6@CHERP	ENST00000198939.6	protein_coding	16542354,16541870,16535452,16533011,16532598,16530769,16530585,16529648,16528080,16525242,16523052,16521521,16520826,16520364,16520149,16519621,16517896	16542415,16542043,16535636,16533148,16532749,16530913,16530674,16529900,16528255,16525677,16523290,16521654,16520912,16520507,16520265,16519715,16519352	Gene ID= ENSG00000085872.14 TPM= 26.27 Transcript Type= protein_coding
chr19	16549837	16572424	16549837	16572424	-	transcript3688.chr19.nnic@SLC35E1	transcript3688.chr19.nnic	protein_coding	16571944,16571512,16568032,16566532,16555152,16552638,16549837	16572424,16571582,16568169,16566657,16555397,16553909,16550463	Gene ID= ENSG00000127526.14 TPM= 4.09 Transcript Type= NA
chr19	16549831	16572382	16549831	16572382	-	ENST00000595753.5@SLC35E1	ENST00000595753.5	protein_coding	16571944,16571512,16568032,16566532,16555152,16549831	16572382,16571582,16568169,16566657,16555397,16553909	Gene ID= ENSG00000127526.14 TPM= 15.18 Transcript Type= protein_coding
chr19	16572624	16575340	16572624	16575340	+	ENST00000623966.1@AC008764.8	ENST00000623966.1	antisense_RNA	16572624	16575340	Gene ID= ENSG00000279529.1 TPM= 3.5 Transcript Type= antisense_RNA
chr19	16574907	16578777	16574907	16578777	-	ENST00000597244.1@MED26	ENST00000597244.1	protein_coding	16574907	16578777	Gene ID= ENSG00000105085.10 TPM= 9.34 Transcript Type= retained_intron
chr19	16574919	16628206	16574919	16628206	-	ENST00000263390.7@MED26	ENST00000263390.7	protein_coding	16627872,16578335,16574919	16628206,16578409,16577682	Gene ID= ENSG00000105085.10 TPM= 14.01 Transcript Type= protein_coding
chr19	16646364	16660442	16646364	16660442	-	ENST00000599310.5@SMIM7	ENST00000599310.5	protein_coding	16660085,16659959,16659395,16654035,16647120,16646364	16660442,16660000,16659447,16654125,16647261,16646800	Gene ID= ENSG00000214046.8 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr19	16646559	16660165	16646559	16660165	-	transcript3727.chr19.nic@SMIM7	transcript3727.chr19.nic	protein_coding	16660085,16659959,16659395,16647120,16646559	16660165,16660000,16659447,16647261,16646800	Gene ID= ENSG00000214046.8 TPM= 2.34 Transcript Type= NA
chr19	16646588	16660144	16646588	16660144	-	ENST00000602194.5@SMIM7	ENST00000602194.5	protein_coding	16660085,16659959,16659395,16647096,16646588	16660144,16660000,16659447,16647261,16646800	Gene ID= ENSG00000214046.8 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr19	16652356	16660142	16652356	16660142	-	ENST00000358726.6@SMIM7	ENST00000358726.6	protein_coding	16660085,16659959,16659395,16654035,16652356	16660142,16660000,16659447,16654125,16652961	Gene ID= ENSG00000214046.8 TPM= 3.5 Transcript Type= protein_coding
chr19	16656432	16659302	16656432	16659302	+	transcript3735.chr19.nnic@NA	transcript3735.chr19.nnic	NA	16656432	16659302	Gene ID= novel_gene_chr19_3736 TPM= 36.2 Transcript Type= NA
chr19	16661127	16690029	16661127	16690029	+	ENST00000187762.6@TMEM38A	ENST00000187762.6	protein_coding	16661127,16679984,16680397,16682421,16686288,16688144	16661341,16680140,16680581,16682508,16686405,16690029	Gene ID= ENSG00000072954.6 TPM= 14.01 Transcript Type= protein_coding
chr19	16829400	16880350	16829400	16880350	+	ENST00000248054.9@SIN3B	ENST00000248054.9	protein_coding	16829400,16829791,16831494,16841768,16846970,16851412,16853069,16854143,16862352,16863680,16865410,16866373,16869460,16871229,16876055,16876486,16877545,16878183,16878497	16829540,16829897,16831647,16841968,16847113,16851534,16853158,16854261,16862559,16863796,16865648,16866556,16870075,16871398,16876228,16876578,16877639,16878390,16880350	Gene ID= ENSG00000127511.9 TPM= 42.03 Transcript Type= protein_coding
chr19	16835497	16840163	16835497	16840163	-	transcript3751.chr19.nnic@NA	transcript3751.chr19.nnic	NA	16835497	16840163	Gene ID= novel_gene_chr19_3752 TPM= 5.84 Transcript Type= NA
chr19	16888936	16892019	16888936	16892019	+	transcript3764.chr19.nnic@F2RL3	transcript3764.chr19.nnic	protein_coding	16888936,16889573,16891758	16889298,16891598,16892019	Gene ID= ENSG00000127533.3 TPM= 7.59 Transcript Type= NA
chr19	16888860	16892606	16888860	16892606	+	ENST00000248076.3@F2RL3	ENST00000248076.3	protein_coding	16888860,16889573	16889298,16892606	Gene ID= ENSG00000127533.3 TPM= 2.92 Transcript Type= protein_coding
chr19	16892135	16895395	16892135	16895395	+	transcript3773.chr19.nnic@NA	transcript3773.chr19.nnic	NA	16892135	16895395	Gene ID= novel_gene_chr19_3774 TPM= 16.93 Transcript Type= NA
chr19	16957547	17026821	16957547	17026821	-	transcript3758.chr19.nic@CPAMD8	transcript3758.chr19.nic	protein_coding	17026551,17022030,17020331,17011592,17011464,17009303,17008505,17004273,17002266,17000414,16997111,16993416,16989643,16980497,16977368,16976002,16975097,16970891,16957547	17026821,17022181,17020353,17011757,17011516,17009320,17008559,17004386,17002350,17000522,16997338,16993586,16989771,16980686,16977540,16976151,16975258,16971033,16957915	Gene ID= ENSG00000160111.12 TPM= 5.84 Transcript Type= NA
chr19	16892951	16903598	16892951	16903598	-	ENST00000594249.5@CPAMD8	ENST00000594249.5	protein_coding	16903561,16902649,16901210,16899475,16897889,16897691,16896456,16896176,16892951	16903598,16902863,16901297,16899549,16897994,16897801,16896665,16896326,16894437	Gene ID= ENSG00000160111.12 TPM= 18.1 Transcript Type= protein_coding
chr19	16892947	17026815	16892947	17026815	-	ENST00000443236.5@CPAMD8	ENST00000443236.5	protein_coding	17026551,17022030,17020331,17011592,17011464,17009303,17008505,17004273,17002266,17000414,16997111,16993416,16989643,16980497,16977368,16976002,16975097,16970891,16957853,16951969,16947074,16945549,16938395,16928942,16928009,16925196,16921905,16914657,16914424,16906952,16904466,16904226,16903702,16903561,16902649,16901210,16899475,16897889,16897691,16896456,16896176,16892947	17026815,17022181,17020353,17011757,17011516,17009320,17008559,17004386,17002350,17000522,16997338,16993586,16989771,16980686,16977540,16976151,16975258,16971033,16957915,16952200,16947227,16945679,16938446,16929240,16928234,16925372,16921986,16914813,16914498,16907117,16904552,16904362,16903857,16903623,16902863,16901297,16899549,16897994,16897801,16896665,16896326,16893339	Gene ID= ENSG00000160111.12 TPM= 18.68 Transcript Type= protein_coding
chr19	17049729	17075613	17049729	17075613	-	ENST00000253669.9@HAUS8	ENST00000253669.9	protein_coding	17075394,17073274,17069031,17062698,17059997,17059557,17058811,17058549,17055861,17052825,17049729	17075613,17073335,17069086,17062779,17060092,17059651,17058876,17058707,17056002,17052966,17050176	Gene ID= ENSG00000131351.14 TPM= 12.84 Transcript Type= protein_coding
chr19	17075740	17213284	17075740	17213284	+	transcript3780.chr19.nic@MYO9B	transcript3780.chr19.nic	protein_coding	17075740,17101660,17145397,17152644,17153967,17154315,17156909,17159395,17162350,17162988,17167943,17172336,17172759,17175663,17180927,17183829,17184865,17185921,17187935,17191097,17192746,17194556,17197792,17198184,17200293,17200639,17201926,17202130,17202845,17203147,17205263,17205960,17206248,17206679,17207113,17209586,17210715,17211647,17211895	17075874,17102557,17145491,17152706,17154066,17154415,17157038,17159484,17162466,17163122,17168064,17172477,17172963,17175741,17181040,17183868,17184987,17186001,17188045,17191219,17193062,17195473,17197858,17198308,17200426,17200829,17202024,17202303,17202883,17203258,17205336,17206152,17206376,17206784,17207244,17209709,17210848,17211774,17213284	Gene ID= ENSG00000099331.13 TPM= 53.71 Transcript Type= NA
chr19	17075740	17103070	17075740	17103070	+	transcript3817.chr19.nic@MYO9B	transcript3817.chr19.nic	protein_coding	17075740,17101660	17075874,17103070	Gene ID= ENSG00000099331.13 TPM= 3.5 Transcript Type= NA
chr19	17075740	17104071	17075740	17104071	+	transcript3818.chr19.nic@MYO9B	transcript3818.chr19.nic	protein_coding	17075740,17101660	17075874,17104071	Gene ID= ENSG00000099331.13 TPM= 3.5 Transcript Type= NA
chr19	17075740	17105345	17075740	17105345	+	transcript3819.chr19.nic@MYO9B	transcript3819.chr19.nic	protein_coding	17075740,17101660	17075874,17105345	Gene ID= ENSG00000099331.13 TPM= 4.67 Transcript Type= NA
chr19	17177288	17179409	17177288	17179409	-	transcript3820.chr19.nnic@NA	transcript3820.chr19.nnic	NA	17177288	17179409	Gene ID= novel_gene_chr19_3821 TPM= 4.67 Transcript Type= NA
chr19	17182072	17183481	17182072	17183481	-	transcript3822.chr19.nnic@NA	transcript3822.chr19.nnic	NA	17182072	17183481	Gene ID= novel_gene_chr19_3823 TPM= 3.5 Transcript Type= NA
chr19	17215359	17219829	17215359	17219829	+	ENST00000263897.9@USE1	ENST00000263897.9	protein_coding	17215359,17215802,17215992,17216169,17217453,17218364,17219213,17219631	17215507,17215851,17216070,17216321,17217462,17218391,17219387,17219829	Gene ID= ENSG00000053501.12 TPM= 39.11 Transcript Type= protein_coding
chr19	17215398	17219819	17215398	17219819	+	ENST00000594724.5@USE1	ENST00000594724.5	protein_coding	17215398,17215992,17216169,17217453,17218364,17219213,17219631	17215507,17216070,17216321,17217462,17218391,17219387,17219819	Gene ID= ENSG00000053501.12 TPM= 2.92 Transcript Type= nonsense_mediated_decay
chr19	17226573	17229215	17226573	17229215	+	transcript3809.chr19.nic@OCEL1	transcript3809.chr19.nic	protein_coding	17226573,17227840,17228256,17228803	17227199,17228005,17228309,17229215	Gene ID= ENSG00000099330.8 TPM= 5.84 Transcript Type= NA
chr19	17226204	17229219	17226204	17229219	+	ENST00000215061.8@OCEL1	ENST00000215061.8	protein_coding	17226204,17226693,17226994,17227840,17228256,17228803	17226316,17226869,17227199,17228005,17228309,17229219	Gene ID= ENSG00000099330.8 TPM= 17.51 Transcript Type= protein_coding
chr19	17226253	17229219	17226253	17229219	+	ENST00000600232.5@OCEL1	ENST00000600232.5	protein_coding	17226253,17226693,17226994,17227840,17228256,17229009	17226316,17226869,17227199,17228005,17228309,17229219	Gene ID= ENSG00000099330.8 TPM= 14.01 Transcript Type= protein_coding
chr19	17226225	17229215	17226225	17229215	+	ENST00000601529.5@OCEL1	ENST00000601529.5	protein_coding	17226225,17226693,17226994,17228256,17228803	17226316,17226869,17227199,17228309,17229215	Gene ID= ENSG00000099330.8 TPM= 1.17 Transcript Type= protein_coding
chr19	17231883	17245940	17231883	17245940	-	ENST00000291442.3@NR2F6	ENST00000291442.3	protein_coding	17244943,17240671,17235499,17231883	17245940,17240765,17236065,17232626	Gene ID= ENSG00000160113.5 TPM= 274.38 Transcript Type= protein_coding
chr19	17249176	17264796	17249176	17264796	-	ENST00000252597.7@USHBP1	ENST00000252597.7	protein_coding	17264671,17264246,17264002,17262552,17259897,17259596,17259289,17258212,17256471,17255385,17251911,17251582,17249176	17264796,17264347,17264150,17262990,17260022,17259732,17259429,17258385,17256720,17255606,17252017,17251704,17250414	Gene ID= ENSG00000130307.11 TPM= 7.01 Transcript Type= protein_coding
chr19	17250159	17264728	17250159	17264728	-	ENST00000324554.9@USHBP1	ENST00000324554.9	protein_coding	17264671,17264246,17264002,17262552,17259897,17259596,17259289,17258584,17258212,17256471,17255385,17251911,17251582,17250159	17264728,17264347,17264150,17262990,17260022,17259732,17259429,17258701,17258385,17256720,17255606,17252017,17251704,17250414	Gene ID= ENSG00000130307.11 TPM= 6.42 Transcript Type= nonsense_mediated_decay
chr19	17250154	17264724	17250154	17264724	-	ENST00000431146.6@USHBP1	ENST00000431146.6	protein_coding	17264671,17264246,17262552,17259897,17259596,17259289,17258212,17256471,17255385,17251911,17251582,17250154	17264724,17264347,17262990,17260022,17259732,17259429,17258385,17256720,17255606,17252017,17251704,17250414	Gene ID= ENSG00000130307.11 TPM= 4.09 Transcript Type= protein_coding
chr19	17267350	17279337	17267350	17279337	+	ENST00000598188.5@BABAM1	ENST00000598188.5	protein_coding	17267350,17268794,17271597,17273904,17274107,17275801,17276495,17276823,17278845	17267527,17269091,17271655,17274024,17274185,17275825,17276624,17276909,17279337	Gene ID= ENSG00000105393.15 TPM= 45.42 Transcript Type= protein_coding
chr19	17267386	17279337	17267386	17279337	+	ENST00000359435.8@BABAM1	ENST00000359435.8	protein_coding	17267386,17268756,17271597,17273904,17274107,17275801,17276495,17276823,17278845	17267527,17269091,17271655,17274024,17274185,17275825,17276624,17276909,17279337	Gene ID= ENSG00000105393.15 TPM= 17.98 Transcript Type= protein_coding
chr19	17267443	17279337	17267443	17279337	+	ENST00000601043.5@BABAM1	ENST00000601043.5	protein_coding	17267443,17268794,17271597,17273904,17274107,17275801,17276495,17276823,17278845	17267516,17269091,17271655,17274024,17274185,17275825,17276624,17276909,17279337	Gene ID= ENSG00000105393.15 TPM= 4.55 Transcript Type= protein_coding
chr19	17267438	17279337	17267438	17279337	+	transcript3845.chr19.nic@BABAM1	transcript3845.chr19.nic	protein_coding	17267438,17271597,17273904,17274107,17275801,17276495,17276823,17278845	17269091,17271655,17274024,17274185,17275825,17276624,17276909,17279337	Gene ID= ENSG00000105393.15 TPM= 15.65 Transcript Type= NA
chr19	17267435	17279337	17267435	17279337	+	transcript3849.chr19.nic@BABAM1	transcript3849.chr19.nic	protein_coding	17267435,17268794,17273904,17274107,17275801,17276495,17278845	17267527,17269091,17274024,17274185,17275825,17276909,17279337	Gene ID= ENSG00000105393.15 TPM= 3.5 Transcript Type= NA
chr19	17292131	17303473	17292131	17303473	-	ENST00000247706.3@ABHD8	ENST00000247706.3	protein_coding	17303242,17300856,17294675,17294288,17292131	17303473,17301624,17294845,17294504,17292831	Gene ID= ENSG00000127220.5 TPM= 68.89 Transcript Type= protein_coding
chr19	17305668	17306843	17305668	17306843	+	ENST00000252602.1@MRPL34	ENST00000252602.1	protein_coding	17305668,17306166	17305957,17306843	Gene ID= ENSG00000130312.6 TPM= 68.89 Transcript Type= protein_coding
chr19	17309531	17323301	17309531	17323301	+	ENST00000359866.8@DDA1	ENST00000359866.8	protein_coding	17309531,17314023,17314338,17315934,17319546	17309657,17314103,17314389,17315995,17323301	Gene ID= ENSG00000130311.10 TPM= 37.36 Transcript Type= protein_coding
chr19	17337555	17342723	17337555	17342723	+	ENST00000600625.5@GTPBP3	ENST00000600625.5	protein_coding	17337555,17338008,17338365,17338539,17338954,17339123,17339434,17341107,17341478	17337664,17338255,17338451,17338741,17339026,17339266,17339599,17341322,17342723	Gene ID= ENSG00000130299.16 TPM= 1.75 Transcript Type= protein_coding
chr19	17337544	17342735	17337544	17342735	+	ENST00000324894.12@GTPBP3	ENST00000324894.12	protein_coding	17337544,17338008,17338365,17338539,17338954,17339123,17339434,17341044,17341478	17337664,17338255,17338451,17338741,17339026,17339266,17339599,17341322,17342735	Gene ID= ENSG00000130299.16 TPM= 5.25 Transcript Type= protein_coding
chr19	17351448	17377350	17351448	17377350	-	ENST00000252590.8@PLVAP	ENST00000252590.8	protein_coding	17376920,17366099,17365286,17360772,17360528,17351448	17377350,17366195,17365998,17360832,17360609,17352368	Gene ID= ENSG00000130300.8 TPM= 340.94 Transcript Type= protein_coding
chr19	17351451	17354771	17351451	17354771	-	transcript3902.chr19.nnic@NA	transcript3902.chr19.nnic	NA	17351451	17354771	Gene ID= novel_gene_chr19_3903 TPM= 9.34 Transcript Type= NA
chr19	17402939	17405648	17402939	17405648	-	ENST00000252593.6@BST2	ENST00000252593.6	protein_coding	17405291,17404371,17404129,17403680,17402939	17405648,17404437,17404189,17403824,17403326	Gene ID= ENSG00000130303.12 TPM= 141.28 Transcript Type= protein_coding
chr19	17405683	17415738	17405683	17415738	+	transcript3911.chr19.nnic@BISPR	transcript3911.chr19.nnic	lincRNA	17405683,17406077,17413221,17414391	17405771,17406296,17413305,17415738	Gene ID= ENSG00000282851.1 TPM= 2.34 Transcript Type= NA
chr19	17468752	17506168	17468752	17506168	+	transcript3918.chr19.nic@SLC27A1	transcript3918.chr19.nic	protein_coding	17468752,17470540,17486563,17487174,17487460,17488848,17489008,17497255,17500278,17500495,17500712,17501273,17504455	17469010,17470707,17486957,17487335,17487529,17488939,17489117,17497464,17500404,17500632,17500876,17501419,17506168	Gene ID= ENSG00000130304.16 TPM= 11.68 Transcript Type= NA
chr19	17469597	17506168	17469597	17506168	+	transcript3919.chr19.nnic@SLC27A1	transcript3919.chr19.nnic	protein_coding	17469597,17470540,17486563,17487174,17487460,17488848,17489008,17497255,17500278,17500495,17500712,17501273,17504455	17469692,17470707,17486957,17487335,17487529,17488939,17489117,17497464,17500404,17500632,17500876,17501419,17506168	Gene ID= ENSG00000130304.16 TPM= 9.34 Transcript Type= NA
chr19	17470444	17506168	17470444	17506168	+	ENST00000252595.11@SLC27A1	ENST00000252595.11	protein_coding	17470444,17486563,17487174,17487460,17488848,17489008,17497255,17500278,17500495,17500712,17501273,17504455	17470707,17486957,17487335,17487529,17488939,17489117,17497464,17500404,17500632,17500876,17501419,17506168	Gene ID= ENSG00000130304.16 TPM= 44.37 Transcript Type= protein_coding
chr19	17511629	17521288	17511629	17521288	+	ENST00000252603.6@PGLS	ENST00000252603.6	protein_coding	17511629,17516173,17517288,17517710,17520944	17511960,17516280,17517389,17517850,17521288	Gene ID= ENSG00000130313.6 TPM= 79.4 Transcript Type= protein_coding
chr19	17555594	17583159	17555594	17583159	+	ENST00000252599.8@COLGALT1	ENST00000252599.8	protein_coding	17555594,17559311,17560348,17567406,17568509,17572483,17577195,17577361,17577957,17579482,17580699,17581177	17555973,17559421,17560465,17567540,17568713,17572602,17577271,17577467,17578089,17579609,17580905,17583159	Gene ID= ENSG00000130309.10 TPM= 179.23 Transcript Type= protein_coding
chr19	17719352	17734516	17719352	17734516	+	ENST00000324096.8@MAP1S	ENST00000324096.8	protein_coding	17719352,17720936,17724126,17725049,17725829,17733193,17734273	17719620,17721037,17724208,17725189,17728172,17733428,17734516	Gene ID= ENSG00000130479.10 TPM= 125.52 Transcript Type= protein_coding
chr19	17719477	17734510	17719477	17734510	+	transcript3972.chr19.nic@MAP1S	transcript3972.chr19.nic	protein_coding	17719477,17720936,17724126,17725049,17725829,17733193	17719620,17721037,17724208,17725189,17728172,17734510	Gene ID= ENSG00000130479.10 TPM= 21.6 Transcript Type= NA
chr19	17747745	17788568	17747745	17788568	+	ENST00000600676.5@FCHO1	ENST00000600676.5	protein_coding	17747745,17754317,17755118,17762762,17764375,17766669,17770425,17770792,17772457,17772645,17774239,17774394,17775056,17775456,17775983,17776247,17776635,17778137,17778609,17781231,17781452,17781712,17783017,17784103,17784725,17786574,17787682,17788284	17747814,17754361,17755191,17762853,17764449,17766810,17770577,17770896,17772555,17772741,17774283,17774478,17775080,17775513,17776161,17776271,17776686,17778228,17778884,17781343,17781539,17781820,17783172,17784235,17784924,17786629,17787846,17788568	Gene ID= ENSG00000130475.14 TPM= 1.79 Transcript Type= protein_coding
chr19	17778442	17788562	17778442	17788562	+	transcript3965.chr19.nic@FCHO1	transcript3965.chr19.nic	protein_coding	17778442,17781231,17781452,17781712,17783017,17784103,17784725,17786574,17787682,17788284	17778884,17781343,17781539,17781820,17783172,17784235,17784924,17786629,17787846,17788562	Gene ID= ENSG00000130475.14 TPM= 2.95 Transcript Type= NA
chr19	17783684	17788562	17783684	17788562	+	transcript3975.chr19.nnic@FCHO1	transcript3975.chr19.nnic	protein_coding	17783684,17784103,17784725,17786574,17787682,17788284	17783978,17784235,17784924,17786629,17787846,17788562	Gene ID= ENSG00000130475.14 TPM= 3.74 Transcript Type= NA
chr19	17783866	17788562	17783866	17788562	+	transcript3977.chr19.nic@FCHO1	transcript3977.chr19.nic	protein_coding	17783866,17784725,17786574,17787682,17788284	17784235,17784924,17786629,17787846,17788562	Gene ID= ENSG00000130475.14 TPM= 2.57 Transcript Type= NA
chr19	17751477	17788557	17751477	17788557	+	ENST00000596536.5@FCHO1	ENST00000596536.5	protein_coding	17751477,17754317,17754592,17755122,17762762,17764375,17766669,17770425,17770792,17772457,17772645,17774239,17774394,17775056,17775456,17775983,17776247,17776635,17778137,17778609,17781231,17781452,17781712,17783017,17784103,17784725,17786574,17787682,17788284	17751577,17754361,17754685,17755191,17762853,17764449,17766810,17770577,17770896,17772555,17772741,17774283,17774478,17775080,17775513,17776161,17776271,17776686,17778228,17778884,17781343,17781539,17781820,17783172,17784235,17784924,17786629,17787846,17788557	Gene ID= ENSG00000130475.14 TPM= 1.79 Transcript Type= protein_coding
chr19	17795110	17813082	17795110	17813082	+	ENST00000318683.6@B3GNT3	ENST00000318683.6	protein_coding	17795110,17807758,17811571	17795206,17808374,17813082	Gene ID= ENSG00000179913.10 TPM= 2.34 Transcript Type= protein_coding
chr19	17824786	17848032	17824786	17848032	-	ENST00000458235.5@JAK3	ENST00000458235.5	protein_coding	17847946,17844234,17843777,17843380,17843027,17842316,17841640,17841389,17840230,17839477,17838263,17837932,17837129,17835924,17835083,17834852,17834571,17832790,17832519,17831674,17831228,17830503,17830108,17824786	17848032,17844430,17843900,17843491,17843172,17842610,17841762,17841546,17840341,17839663,17838390,17838063,17837213,17836051,17835215,17835003,17834721,17832929,17832708,17831798,17831400,17830620,17830218,17826910	Gene ID= ENSG00000105639.18 TPM= 21.02 Transcript Type= protein_coding
chr19	17859876	17863316	17859876	17863316	+	ENST00000222247.9@RPL18A	ENST00000222247.9	protein_coding	17859876,17861293,17862094,17862918,17863171	17859974,17861472,17862223,17863027,17863316	Gene ID= ENSG00000105640.12 TPM= 758.94 Transcript Type= protein_coding
chr19	17933016	17943937	17933016	17943937	+	ENST00000445755.6@CCDC124	ENST00000445755.6	protein_coding	17933016,17936410,17942656,17943261,17943508	17933048,17936579,17942845,17943375,17943937	Gene ID= ENSG00000007080.10 TPM= 60.71 Transcript Type= protein_coding
chr19	17935096	17943991	17935096	17943991	+	ENST00000597436.5@CCDC124	ENST00000597436.5	protein_coding	17935096,17936410,17942656,17943261,17943508	17935191,17936579,17942845,17943375,17943991	Gene ID= ENSG00000007080.10 TPM= 28.02 Transcript Type= protein_coding
chr19	18008168	18014102	18008168	18014102	+	ENST00000222250.4@ARRDC2	ENST00000222250.4	protein_coding	18008168,18008711,18008971,18009592,18009783,18010196,18010572,18012913	18008584,18008777,18009118,18009694,18010039,18010358,18010729,18014102	Gene ID= ENSG00000105643.9 TPM= 46.7 Transcript Type= protein_coding
chr19	18001132	18014102	18001132	18014102	+	ENST00000379656.7@ARRDC2	ENST00000379656.7	protein_coding	18001132,18008711,18008971,18009592,18009783,18010196,18010572,18012913	18001573,18008777,18009118,18009694,18010039,18010358,18010729,18014102	Gene ID= ENSG00000105643.9 TPM= 124.93 Transcript Type= protein_coding
chr19	18058995	18087003	18058995	18087003	-	ENST00000593993.6@IL12RB1	ENST00000593993.6	protein_coding	18086760,18083432,18082150,18080832,18077516,18076297,18075749,18073517,18072112,18069546,18068389,18066542,18063876,18062181,18061122,18059894,18058995	18087003,18083491,18082264,18081001,18077655,18076327,18075868,18073599,18072349,18069713,18068526,18066697,18064010,18062277,18061197,18060085,18059613	Gene ID= ENSG00000096996.15 TPM= 1.17 Transcript Type= protein_coding
chr19	18070562	18086932	18070562	18086932	-	ENST00000322153.11@IL12RB1	ENST00000322153.11	protein_coding	18086760,18083432,18082150,18080832,18077516,18076297,18075749,18073517,18072112,18070562	18086932,18083491,18082264,18081001,18077655,18076327,18075868,18073599,18072349,18071333	Gene ID= ENSG00000096996.15 TPM= 3.5 Transcript Type= protein_coding
chr19	18153118	18170540	18153118	18170540	+	ENST00000222254.12@PIK3R2	ENST00000222254.12	protein_coding	18153118,18155457,18160471,18160919,18161054,18161279,18161966,18162202,18162408,18162967,18163263,18166160,18167130,18168475,18168726,18169087	18153294,18156201,18160563,18160969,18161185,18161495,18162051,18162310,18162506,18163147,18163388,18166302,18167306,18168546,18168896,18170540	Gene ID= ENSG00000105647.16 TPM= 43.2 Transcript Type= protein_coding
chr19	18173170	18178117	18173170	18178117	+	transcript4018.chr19.nic@IFI30	transcript4018.chr19.nic	protein_coding	18173170,18173804,18175040,18175311,18175605,18177140,18177711,18177849	18173219,18173973,18175222,18175385,18175697,18177292,18177764,18178117	Gene ID= ENSG00000216490.3 TPM= 984.28 Transcript Type= NA
chr19	18193182	18196742	18193182	18196742	+	ENST00000599612.2@MPV17L2	ENST00000599612.2	protein_coding	18193182,18193864,18194777,18194958,18195999	18193468,18194034,18194853,18195086,18196742	Gene ID= ENSG00000254858.9 TPM= 26.85 Transcript Type= protein_coding
chr19	18196784	18204074	18196784	18204074	-	ENST00000222256.8@RAB3A	ENST00000222256.8	protein_coding	18203896,18202513,18200327,18198725,18196784	18204074,18202740,18200445,18198849,18197660	Gene ID= ENSG00000105649.9 TPM= 2.34 Transcript Type= protein_coding
chr19	18279760	18281622	18279760	18281622	-	ENST00000252818.4@JUND	ENST00000252818.4	protein_coding	18279760	18281622	Gene ID= ENSG00000130522.5 TPM= 1035.66 Transcript Type= protein_coding
chr19	18291800	18292612	18291800	18292612	+	transcript4040.chr19.nnic@NA	transcript4040.chr19.nnic	NA	18291800	18292612	Gene ID= novel_gene_chr19_4041 TPM= 2.34 Transcript Type= NA
chr19	18306916	18323177	18306916	18323177	-	transcript4050.chr19.nic@LSM4	transcript4050.chr19.nic	protein_coding	18323018,18316024,18310110,18309678,18306916	18323177,18316065,18312702,18309861,18307555	Gene ID= ENSG00000130520.10 TPM= 4.67 Transcript Type= NA
chr19	18306230	18323274	18306230	18323274	-	ENST00000593829.5@LSM4	ENST00000593829.5	protein_coding	18323018,18316024,18312604,18309678,18306230	18323274,18316065,18312702,18309861,18307555	Gene ID= ENSG00000130520.10 TPM= 120.26 Transcript Type= protein_coding
chr19	18306907	18323071	18306907	18323071	-	ENST00000252816.10@LSM4	ENST00000252816.10	protein_coding	18323018,18312604,18309678,18306907	18323071,18312702,18309861,18307555	Gene ID= ENSG00000130520.10 TPM= 3.5 Transcript Type= protein_coding
chr19	18340587	18369950	18340587	18369950	+	ENST00000269919.10@PGPEP1	ENST00000269919.10	protein_coding	18340587,18342859,18355895,18357383,18363391	18340715,18342911,18356011,18357615,18369950	Gene ID= ENSG00000130517.13 TPM= 15.18 Transcript Type= protein_coding
chr19	18382169	18389176	18382169	18389176	+	transcript4060.chr19.nnic@GDF15	transcript4060.chr19.nnic	protein_coding	18382169,18385917,18388286	18382629,18386466,18389176	Gene ID= ENSG00000130513.6 TPM= 8.17 Transcript Type= NA
chr19	18386158	18389176	18386158	18389176	+	ENST00000252809.3@GDF15	ENST00000252809.3	protein_coding	18386158,18388286	18386466,18389176	Gene ID= ENSG00000130513.6 TPM= 54.88 Transcript Type= protein_coding
chr19	18391149	18397611	18391149	18397611	-	ENST00000595840.1@LRRC25	ENST00000595840.1	protein_coding	18397453,18396185,18391149	18397611,18396972,18392125	Gene ID= ENSG00000175489.9 TPM= 22.77 Transcript Type= protein_coding
chr19	18391144	18397617	18391144	18397617	-	ENST00000339007.3@LRRC25	ENST00000339007.3	protein_coding	18396185,18391144	18397617,18392125	Gene ID= ENSG00000175489.9 TPM= 37.95 Transcript Type= protein_coding
chr19	18419282	18434562	18419282	18434562	+	transcript4073.chr19.nic@SSBP4	transcript4073.chr19.nic	protein_coding	18419282,18427351,18427752,18427898,18430841,18431353,18431647,18431793,18432000,18432147,18432559,18432700,18432829,18432973,18433135,18433585,18433710,18434217	18419707,18427423,18427813,18427982,18430930,18431418,18431706,18431862,18432070,18432214,18432604,18432735,18432883,18433043,18433213,18433613,18433932,18434562	Gene ID= ENSG00000130511.15 TPM= 17.16 Transcript Type= NA
chr19	18419282	18434562	18419282	18434562	+	transcript4079.chr19.nic@SSBP4	transcript4079.chr19.nic	protein_coding	18419282,18427351,18427752,18427898,18430841,18431647,18431793,18432000,18432147,18432559,18432700,18432829,18432973,18433135,18433585,18433710,18434217	18419707,18427423,18427813,18427982,18430930,18431706,18431862,18432070,18432214,18432604,18432735,18432883,18433043,18433213,18433613,18433932,18434562	Gene ID= ENSG00000130511.15 TPM= 32.34 Transcript Type= NA
chr19	18419388	18434562	18419388	18434562	+	transcript4081.chr19.nic@SSBP4	transcript4081.chr19.nic	protein_coding	18419388,18427351,18427752,18427898,18430841,18431647,18431793,18432000,18432147,18432559,18432700,18432829,18432973,18433135,18433585,18433710	18419707,18427423,18427813,18427982,18430930,18431706,18431862,18432070,18432214,18432604,18432735,18432883,18433043,18433213,18433613,18434562	Gene ID= ENSG00000130511.15 TPM= 14.24 Transcript Type= NA
chr19	18419355	18434562	18419355	18434562	+	ENST00000270061.11@SSBP4	ENST00000270061.11	protein_coding	18419355,18427351,18427752,18427898,18430841,18431353,18431647,18431793,18432000,18432147,18432559,18432700,18432829,18432973,18433135,18433585,18433710,18434217	18419707,18427423,18427813,18427982,18430930,18431418,18431706,18431862,18432070,18432214,18432604,18432735,18432883,18433043,18433213,18433613,18433817,18434562	Gene ID= ENSG00000130511.15 TPM= 23 Transcript Type= protein_coding
chr19	18419336	18434562	18419336	18434562	+	ENST00000348495.10@SSBP4	ENST00000348495.10	protein_coding	18419336,18427351,18427752,18427898,18430841,18431647,18431793,18432000,18432147,18432559,18432700,18432829,18432973,18433135,18433585,18433710,18434217	18419707,18427423,18427813,18427982,18430930,18431706,18431862,18432070,18432214,18432604,18432735,18432883,18433043,18433213,18433613,18433817,18434562	Gene ID= ENSG00000130511.15 TPM= 33.51 Transcript Type= protein_coding
chr19	18434388	18438301	18434388	18438301	-	ENST00000338128.12@ISYNA1	ENST00000338128.12	protein_coding	18438093,18437860,18437599,18436973,18436684,18436330,18436032,18435757,18435563,18435266,18434388	18438301,18437988,18437760,18437105,18436877,18436479,18436247,18435921,18435676,18435483,18435117	Gene ID= ENSG00000105655.18 TPM= 62.47 Transcript Type= protein_coding
chr19	18434821	18438180	18434821	18438180	-	transcript4088.chr19.nic@ISYNA1	transcript4088.chr19.nic	protein_coding	18438093,18437860,18437599,18436684,18436330,18436032,18435757,18435563,18435266,18434821	18438180,18437988,18437760,18437105,18436479,18436247,18435921,18435676,18435483,18435117	Gene ID= ENSG00000105655.18 TPM= 16.93 Transcript Type= NA
chr19	18434821	18438180	18434821	18438180	-	transcript4093.chr19.nic@ISYNA1	transcript4093.chr19.nic	protein_coding	18438093,18437860,18437599,18436330,18436032,18435563,18435266,18434821	18438180,18437988,18437760,18437105,18436247,18435921,18435483,18435117	Gene ID= ENSG00000105655.18 TPM= 4.67 Transcript Type= NA
chr19	18442663	18522127	18442663	18522127	-	ENST00000262809.8@ELL	ENST00000262809.8	protein_coding	18521921,18472835,18465797,18465412,18461578,18458205,18451552,18450477,18446748,18446309,18445224,18442663	18522127,18472882,18465918,18465575,18461852,18458329,18451648,18450975,18446814,18446480,18445268,18444868	Gene ID= ENSG00000105656.12 TPM= 30.36 Transcript Type= protein_coding
chr19	18450928	18454856	18450928	18454856	+	transcript4104.chr19.nnic@NA	transcript4104.chr19.nnic	NA	18450928	18454856	Gene ID= novel_gene_chr19_4105 TPM= 5.84 Transcript Type= NA
chr19	18452999	18456974	18452999	18456974	+	transcript4106.chr19.nnic@NA	transcript4106.chr19.nnic	NA	18452999	18456974	Gene ID= novel_gene_chr19_4107 TPM= 5.84 Transcript Type= NA
chr19	18531762	18543660	18531762	18543660	-	ENST00000608443.5@FKBP8	ENST00000608443.5	protein_coding	18543486,18541679,18539551,18539371,18538216,18537601,18533270,18532664,18531762	18543660,18541995,18539720,18539459,18538436,18537773,18533347,18532795,18532255	Gene ID= ENSG00000105701.15 TPM= 449.07 Transcript Type= protein_coding
chr19	18531762	18543524	18531762	18543524	-	ENST00000222308.8@FKBP8	ENST00000222308.8	protein_coding	18543486,18541679,18539551,18539371,18538216,18537601,18533270,18532664,18531762	18543524,18541995,18539720,18539459,18538433,18537773,18533347,18532795,18532255	Gene ID= ENSG00000105701.15 TPM= 33.76 Transcript Type= protein_coding
chr19	18531762	18542972	18531762	18542972	-	ENST00000596558.6@FKBP8	ENST00000596558.6	protein_coding	18542888,18541679,18539551,18539371,18538216,18537601,18533270,18532664,18531762	18542972,18541995,18539720,18539459,18538433,18537773,18533347,18532795,18532255	Gene ID= ENSG00000105701.15 TPM= 17.41 Transcript Type= protein_coding
chr19	18557762	18569387	18557762	18569387	+	ENST00000540691.5@KXD1	ENST00000540691.5	protein_coding	18557762,18560420,18562036,18564869,18567132,18568402	18557914,18560550,18562157,18565021,18567178,18569387	Gene ID= ENSG00000105700.10 TPM= 9.22 Transcript Type= protein_coding
chr19	18557762	18569387	18557762	18569387	+	ENST00000539106.5@KXD1	ENST00000539106.5	protein_coding	18557762,18562036,18564869,18567132,18568402	18557949,18562157,18565021,18567178,18569387	Gene ID= ENSG00000105700.10 TPM= 6.89 Transcript Type= protein_coding
chr19	18557788	18569378	18557788	18569378	+	ENST00000222307.8@KXD1	ENST00000222307.8	protein_coding	18557788,18562036,18564869,18567132,18568402	18557914,18562157,18565021,18567178,18569378	Gene ID= ENSG00000105700.10 TPM= 82.98 Transcript Type= protein_coding
chr19	18571802	18575241	18571802	18575241	+	ENST00000430157.6@UBA52	ENST00000430157.6	protein_coding	18571802,18573293,18573662,18574870,18575057	18571887,18573403,18573748,18574972,18575241	Gene ID= ENSG00000221983.7 TPM= 118.51 Transcript Type= protein_coding
chr19	18571872	18575241	18571872	18575241	+	transcript4161.chr19.nic@UBA52	transcript4161.chr19.nic	protein_coding	18571872,18573293,18573662,18574870,18575057	18572607,18573403,18573748,18574972,18575241	Gene ID= ENSG00000221983.7 TPM= 19.27 Transcript Type= NA
chr19	18593237	18606850	18593237	18606850	-	ENST00000392386.7@CRLF1	ENST00000392386.7	protein_coding	18606542,18599565,18598772,18598432,18596892,18596622,18594247,18594065,18593237	18606850,18599846,18598901,18598601,18597049,18596790,18594434,18594107,18593579	Gene ID= ENSG00000006016.10 TPM= 28.02 Transcript Type= protein_coding
chr19	18588796	18592336	18588796	18592336	+	ENST00000450195.6@C19orf60	ENST00000450195.6	protein_coding	18588796,18588995,18589479,18590854,18592108	18588900,18589077,18589683,18590933,18592336	Gene ID= ENSG00000006015.17 TPM= 34.25 Transcript Type= protein_coding
chr19	18588725	18592336	18588725	18592336	+	ENST00000358607.10@C19orf60	ENST00000358607.10	protein_coding	18588725,18588995,18589413,18590854,18592108	18588900,18589077,18589683,18590933,18592336	Gene ID= ENSG00000006015.17 TPM= 25.49 Transcript Type= protein_coding
chr19	18588809	18592327	18588809	18592327	+	ENST00000597371.1@C19orf60	ENST00000597371.1	protein_coding	18588809,18588995,18590854,18592108	18588900,18589683,18590933,18592327	Gene ID= ENSG00000006015.17 TPM= 31.33 Transcript Type= retained_intron
chr19	18588798	18592336	18588798	18592336	+	ENST00000600997.5@C19orf60	ENST00000600997.5	protein_coding	18588798,18588995,18590854	18588900,18589683,18592336	Gene ID= ENSG00000006015.17 TPM= 1.17 Transcript Type= retained_intron
chr19	18637033	18670490	18637033	18670490	+	transcript4185.chr19.nnic@KLHL26	transcript4185.chr19.nnic	protein_coding	18637033,18664261,18667664	18637137,18664368,18670490	Gene ID= ENSG00000167487.11 TPM= 12.84 Transcript Type= NA
chr19	18683677	18777952	18683677	18777952	+	ENST00000321949.12@CRTC1	ENST00000321949.12	protein_coding	18683677,18742910,18745823,18747053,18749781,18753500,18759551,18760008,18765404,18768485,18771442,18774900,18775641,18777171	18683828,18743026,18745960,18747114,18749875,18753585,18759591,18760228,18765528,18768793,18771546,18774986,18775821,18777952	Gene ID= ENSG00000105662.15 TPM= 5.84 Transcript Type= protein_coding
chr19	18716259	18719997	18716259	18719997	-	transcript4195.chr19.nnic@NA	transcript4195.chr19.nnic	NA	18716259	18719997	Gene ID= novel_gene_chr19_4196 TPM= 2.34 Transcript Type= NA
chr19	18748640	18752162	18748640	18752162	+	transcript4193.chr19.nnic@NA	transcript4193.chr19.nnic	NA	18748640	18752162	Gene ID= novel_gene_chr19_4194 TPM= 2.34 Transcript Type= NA
chr19	18782773	18791314	18782773	18791314	-	ENST00000222271.6@COMP	ENST00000222271.6	protein_coding	18791191,18790850,18790562,18789942,18789160,18788839,18788592,18788410,18788212,18787491,18786532,18786239,18785965,18785673,18785498,18784896,18784191,18783054,18782773	18791314,18790935,18790613,18790114,18789297,18788913,18788750,18788514,18788319,18787650,18786650,18786291,18786146,18785851,18785546,18785092,18784363,18783193,18782961	Gene ID= ENSG00000105664.10 TPM= 33.86 Transcript Type= protein_coding
chr19	18831938	18868236	18831938	18868236	+	ENST00000262803.9@UPF1	ENST00000262803.9	protein_coding	18831938,18845980,18847744,18850075,18850688,18852135,18852987,18853252,18854601,18854879,18855124,18855925,18856186,18856877,18857320,18860321,18860826,18862010,18863438,18864170,18865289,18865561,18866044,18866521	18832440,18846119,18847833,18850242,18850868,18852296,18853071,18853350,18854709,18855038,18855242,18856089,18856300,18857020,18857533,18860438,18860982,18862152,18863612,18864251,18865450,18865778,18866166,18868236	Gene ID= ENSG00000005007.12 TPM= 119.09 Transcript Type= protein_coding
chr19	18832001	18868229	18832001	18868229	+	ENST00000599848.5@UPF1	ENST00000599848.5	protein_coding	18832001,18845980,18847744,18850075,18850688,18852135,18852987,18853252,18854601,18854879,18855124,18855925,18856186,18856877,18857320,18860321,18860826,18862010,18863438,18864170,18865289,18865561,18866044,18866521	18832440,18846119,18847833,18850242,18850868,18852296,18853104,18853350,18854709,18855038,18855242,18856089,18856300,18857020,18857533,18860438,18860982,18862152,18863612,18864251,18865450,18865778,18866166,18868229	Gene ID= ENSG00000005007.12 TPM= 44.37 Transcript Type= protein_coding
chr19	18899514	18919405	18899514	18919405	-	transcript4209.chr19.nic@COPE	transcript4209.chr19.nic	protein_coding	18919223,18912984,18910971,18906960,18905576,18904771,18903268,18900381,18899873,18899514	18919405,18913046,18911071,18907112,18905629,18904852,18903423,18900449,18899947,18899709	Gene ID= ENSG00000105669.13 TPM= 12.84 Transcript Type= NA
chr19	18899514	18919397	18899514	18919397	-	ENST00000262812.8@COPE	ENST00000262812.8	protein_coding	18919223,18912984,18910971,18906960,18905576,18904771,18903268,18900381,18899873,18899514	18919397,18913046,18911071,18907112,18905629,18904852,18903423,18900449,18899947,18899726	Gene ID= ENSG00000105669.13 TPM= 286.06 Transcript Type= protein_coding
chr19	18899517	18919363	18899517	18919363	-	ENST00000349893.8@COPE	ENST00000349893.8	protein_coding	18919223,18912984,18910971,18906960,18905576,18904771,18900381,18899873,18899517	18919363,18913046,18911071,18907112,18905629,18904852,18900449,18899947,18899726	Gene ID= ENSG00000105669.13 TPM= 9.34 Transcript Type= protein_coding
chr19	18899563	18919380	18899563	18919380	-	ENST00000600932.5@COPE	ENST00000600932.5	protein_coding	18919223,18912984,18910971,18906960,18905867,18905576,18904771,18903268,18900381,18899873,18899563	18919380,18913046,18911071,18907112,18905935,18905629,18904852,18903423,18900449,18899947,18899726	Gene ID= ENSG00000105669.13 TPM= 2.34 Transcript Type= protein_coding
chr19	18899573	18919375	18899573	18919375	-	ENST00000351079.8@COPE	ENST00000351079.8	protein_coding	18919223,18912984,18910971,18905576,18904771,18903268,18900381,18899873,18899573	18919375,18913046,18911071,18905629,18904852,18903423,18900449,18899947,18899726	Gene ID= ENSG00000105669.13 TPM= 1.17 Transcript Type= protein_coding
chr19	18919675	18928633	18919675	18928633	+	ENST00000629999.2@DDX49	ENST00000629999.2	protein_coding	18919675,18920580,18920834,18921663,18921843,18922326,18922604,18924233,18924623,18924882,18926303,18927766,18927965,18928128	18919856,18920703,18920909,18921748,18921964,18922513,18922744,18924308,18924699,18924979,18926377,18927854,18928036,18928633	Gene ID= ENSG00000105671.11 TPM= 6.22 Transcript Type= protein_coding
chr19	18919675	18928622	18919675	18928622	+	transcript4229.chr19.nnic@DDX49	transcript4229.chr19.nnic	protein_coding	18919675,18920580,18921663,18921843,18922326,18922604,18923990,18924623,18924882,18926303,18927766,18927965,18928128	18919856,18920703,18921748,18921964,18922513,18922744,18924308,18924699,18924979,18926377,18927854,18928036,18928622	Gene ID= ENSG00000105671.11 TPM= 3.3 Transcript Type= NA
chr19	18919675	18928627	18919675	18928627	+	ENST00000247003.8@DDX49	ENST00000247003.8	protein_coding	18919675,18920580,18921663,18921843,18922326,18922604,18924233,18924623,18924882,18926303,18927766,18927965,18928128	18919856,18920703,18921748,18921964,18922513,18922744,18924308,18924699,18924979,18926377,18927854,18928036,18928627	Gene ID= ENSG00000105671.11 TPM= 42.23 Transcript Type= protein_coding
chr19	18919738	18928622	18919738	18928622	+	ENST00000602113.5@DDX49	ENST00000602113.5	protein_coding	18919738,18920651,18921663,18921843,18922326,18922604,18924233,18924623,18924882,18926303,18927766,18927965,18928128	18919856,18920703,18921748,18921964,18922513,18922744,18924308,18924699,18924979,18926377,18927854,18928036,18928622	Gene ID= ENSG00000105671.11 TPM= 8.96 Transcript Type= nonsense_mediated_decay
chr19	18929203	18941266	18929203	18941266	-	transcript4241.chr19.nic@HOMER3	transcript4241.chr19.nic	protein_coding	18941193,18938969,18938728,18938353,18934303,18932924,18931976,18931509,18931325,18929203	18941266,18939049,18938884,18938484,18934410,18933045,18932132,18931625,18931411,18929634	Gene ID= ENSG00000051128.18 TPM= 10.51 Transcript Type= NA
chr19	18929203	18941214	18929203	18941214	-	ENST00000392351.7@HOMER3	ENST00000392351.7	protein_coding	18941051,18938969,18938728,18938353,18934303,18932924,18931976,18931509,18931325,18929203	18941214,18939049,18938884,18938484,18934410,18933045,18932132,18931625,18931411,18929634	Gene ID= ENSG00000051128.18 TPM= 71.22 Transcript Type= protein_coding
chr19	18990888	19033521	18990888	19033521	-	transcript4247.chr19.nic@SUGP2	transcript4247.chr19.nic	protein_coding	19033437,19030951,19024619,19019109,19009855,19008317,19004168,19001613,18995144,18994366,18993638,18990888	19033521,19031082,19026226,19019229,19010342,19008428,19004646,19001674,18995280,18994486,18993740,18991149	Gene ID= ENSG00000064607.16 TPM= 18.97 Transcript Type= NA
chr19	18990888	19033510	18990888	19033510	-	transcript4253.chr19.nic@SUGP2	transcript4253.chr19.nic	protein_coding	19033437,19030951,19024619,19019109,19009855,19008317,19004168,19001613,18994366,18993638,18990888	19033510,19031082,19026226,19019229,19010342,19008428,19004646,19001674,18995280,18993740,18991149	Gene ID= ENSG00000064607.16 TPM= 20.14 Transcript Type= NA
chr19	18990890	19034040	18990890	19034040	-	transcript4258.chr19.nic@SUGP2	transcript4258.chr19.nic	protein_coding	19033762,19030951,19024619,19019109,19009855,19008317,19004168,19001613,18994366,18993648,18990890	19034040,19031082,19026226,19019229,19010342,19008428,19004646,19001674,18995280,18993740,18991149	Gene ID= ENSG00000064607.16 TPM= 4.22 Transcript Type= NA
chr19	18990888	19033499	18990888	19033499	-	ENST00000452918.6@SUGP2	ENST00000452918.6	protein_coding	19033437,19030951,19024619,19019109,19009855,19008317,19004168,19001613,18995144,18994366,18990888	19033499,19031082,19026226,19019229,19010342,19008428,19004646,19001674,18995280,18994486,18993740	Gene ID= ENSG00000064607.16 TPM= 14.3 Transcript Type= protein_coding
chr19	19002978	19033506	19002978	19033506	-	transcript4285.chr19.nic@SUGP2	transcript4285.chr19.nic	protein_coding	19033437,19030951,19024619,19019109,19009855,19008317,19002978	19033506,19031082,19026226,19019229,19010342,19008428,19004646	Gene ID= ENSG00000064607.16 TPM= 2.63 Transcript Type= NA
chr19	18990893	19033559	18990893	19033559	-	ENST00000337018.10@SUGP2	ENST00000337018.10	protein_coding	19033437,19030951,19024619,19019109,19009855,19008317,19004168,19001613,18995144,18994366,18990893	19033559,19031082,19026226,19019229,19010342,19008428,19004646,19001674,18995280,18994486,18991149	Gene ID= ENSG00000064607.16 TPM= 15.47 Transcript Type= protein_coding
chr19	18990890	19033816	18990890	19033816	-	ENST00000594773.5@SUGP2	ENST00000594773.5	protein_coding	19033762,19030951,19024619,19019109,19009855,19008317,19004430,19004168,19001613,18994366,18993648,18990890	19033816,19031082,19026226,19019229,19010342,19008428,19004646,19004273,19001674,18995280,18993740,18991149	Gene ID= ENSG00000064607.16 TPM= 2.46 Transcript Type= nonsense_mediated_decay
chr19	19033611	19058178	19033611	19058178	+	transcript4286.chr19.nic@ARMC6	transcript4286.chr19.nic	protein_coding	19033611,19051622,19054152,19055265,19055791,19057416	19033930,19052195,19054321,19055396,19055928,19058178	Gene ID= ENSG00000105676.13 TPM= 4.87 Transcript Type= NA
chr19	19033578	19058178	19033578	19058178	+	ENST00000535612.5@ARMC6	ENST00000535612.5	protein_coding	19033578,19034131,19042711,19043992,19051622,19054152,19055265,19055791,19057416	19033930,19034238,19042877,19044074,19052195,19054321,19055396,19055928,19058178	Gene ID= ENSG00000105676.13 TPM= 23.55 Transcript Type= protein_coding
chr19	19033575	19058178	19033575	19058178	+	ENST00000392335.6@ARMC6	ENST00000392335.6	protein_coding	19033575,19042711,19043992,19051622,19054152,19055265,19055791,19057416	19033930,19042877,19044074,19052195,19054321,19055396,19055928,19058178	Gene ID= ENSG00000105676.13 TPM= 56.24 Transcript Type= protein_coding
chr19	19033610	19058159	19033610	19058159	+	ENST00000269932.10@ARMC6	ENST00000269932.10	protein_coding	19033610,19042711,19043992,19051622,19054152,19055265,19055791,19057416	19034013,19042877,19044074,19052195,19054321,19055396,19055928,19058159	Gene ID= ENSG00000105676.13 TPM= 6.42 Transcript Type= protein_coding
chr19	19063994	19112883	19063994	19112883	+	transcript4288.chr19.nnic@SLC25A42	transcript4288.chr19.nnic	protein_coding	19063994,19096091,19101781,19104913,19105561,19106269,19107894,19110569,19112179	19064046,19096205,19101886,19104938,19105727,19106385,19108045,19111698,19112883	Gene ID= ENSG00000181035.13 TPM= 2.34 Transcript Type= NA
chr19	19063994	19112888	19063994	19112888	+	transcript4295.chr19.nic@SLC25A42	transcript4295.chr19.nic	protein_coding	19063994,19096091,19101781,19104913,19105561,19106269,19107894,19110569	19064046,19096205,19101886,19104938,19105727,19106385,19108045,19112888	Gene ID= ENSG00000181035.13 TPM= 2.34 Transcript Type= NA
chr19	19063999	19112888	19063999	19112888	+	ENST00000318596.7@SLC25A42	ENST00000318596.7	protein_coding	19063999,19096091,19101781,19104913,19105561,19106269,19107894,19110569	19064115,19096205,19101886,19104938,19105727,19106385,19108045,19112888	Gene ID= ENSG00000181035.13 TPM= 46.7 Transcript Type= protein_coding
chr19	19119615	19138493	19119615	19138493	-	ENST00000162044.13@TMEM161A	ENST00000162044.13	protein_coding	19138426,19134784,19133130,19132657,19132352,19130156,19121759,19121525,19121308,19120992,19120765,19119615	19138493,19134887,19133210,19132754,19132508,19130307,19121819,19121668,19121421,19121166,19120861,19120183	Gene ID= ENSG00000064545.14 TPM= 37.65 Transcript Type= protein_coding
chr19	19119615	19138493	19119615	19138493	-	ENST00000587406.5@TMEM161A	ENST00000587406.5	protein_coding	19138426,19134784,19133130,19132657,19132352,19130156,19121759,19121308,19120992,19120765,19119615	19138493,19134887,19133210,19132754,19132508,19130307,19121819,19121668,19121166,19120861,19120183	Gene ID= ENSG00000064545.14 TPM= 7.88 Transcript Type= retained_intron
chr19	19119615	19138493	19119615	19138493	-	transcript4306.chr19.nic@TMEM161A	transcript4306.chr19.nic	protein_coding	19138426,19134784,19133130,19132352,19130156,19121759,19121308,19120992,19120765,19119615	19138493,19134887,19133210,19132754,19130307,19121819,19121668,19121166,19120861,19120183	Gene ID= ENSG00000064545.14 TPM= 5.55 Transcript Type= NA
chr19	19119660	19138447	19119660	19138447	-	ENST00000587583.6@TMEM161A	ENST00000587583.6	protein_coding	19138426,19134784,19133130,19132657,19132352,19130156,19121759,19121525,19121308,19120992,19120765,19119660	19138447,19134887,19133210,19132754,19132433,19130307,19121819,19121668,19121421,19121166,19120861,19120183	Gene ID= ENSG00000064545.14 TPM= 2.63 Transcript Type= protein_coding
chr19	19145572	19192158	19145572	19192158	-	ENST00000602804.5@BORCS8-MEF2B	ENST00000602804.5	protein_coding	19192081,19186893,19186034,19182573,19180686,19150682,19149226,19147698,19147036,19146742,19146555,19146273,19145572	19192158,19187005,19186098,19182683,19180761,19150764,19149429,19147832,19147183,19146875,19146648,19146384,19146022	Gene ID= ENSG00000064489.22 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr19	19176906	19192589	19176906	19192589	-	ENST00000462790.7@BORCS8	ENST00000462790.7	protein_coding	19192081,19186893,19186034,19182573,19180686,19176906	19192589,19187005,19186098,19182683,19180761,19177460	Gene ID= ENSG00000254901.7 TPM= 28.61 Transcript Type= protein_coding
chr19	19181882	19192589	19181882	19192589	-	ENST00000477565.3@BORCS8	ENST00000477565.3	protein_coding	19192081,19186893,19186034,19181882	19192589,19187005,19186098,19182683	Gene ID= ENSG00000254901.7 TPM= 10.51 Transcript Type= protein_coding
chr19	19176906	19192139	19176906	19192139	-	ENST00000585679.1@BORCS8	ENST00000585679.1	protein_coding	19192081,19182573,19180686,19176906	19192139,19182683,19180761,19177460	Gene ID= ENSG00000254901.7 TPM= 11.09 Transcript Type= protein_coding
chr19	19192734	19201866	19192734	19201866	+	transcript4321.chr19.nic@RFXANK	transcript4321.chr19.nic	protein_coding	19192734,19193939,19196966,19197186,19197521,19198107,19198657,19199154,19201649	19193100,19194133,19197046,19197251,19197621,19198232,19198723,19199234,19201866	Gene ID= ENSG00000064490.13 TPM= 20.23 Transcript Type= NA
chr19	19192902	19201866	19192902	19201866	+	transcript4324.chr19.nic@RFXANK	transcript4324.chr19.nic	protein_coding	19192902,19193939,19196963,19198107,19198657,19199154,19201649	19193100,19194133,19197621,19198232,19198723,19199234,19201866	Gene ID= ENSG00000064490.13 TPM= 3.5 Transcript Type= NA
chr19	19192230	19201869	19192230	19201869	+	ENST00000303088.8@RFXANK	ENST00000303088.8	protein_coding	19192230,19192960,19193939,19196963,19197186,19197521,19198107,19198657,19199154,19201649	19192554,19193100,19194133,19197046,19197251,19197621,19198232,19198723,19199234,19201869	Gene ID= ENSG00000064490.13 TPM= 23.74 Transcript Type= protein_coding
chr19	19192911	19201866	19192911	19201866	+	ENST00000392324.8@RFXANK	ENST00000392324.8	protein_coding	19192911,19193939,19196966,19197521,19198107,19198657,19199154,19201649	19193100,19194133,19197046,19197621,19198232,19198723,19199234,19201866	Gene ID= ENSG00000064490.13 TPM= 2.72 Transcript Type= protein_coding
chr19	19201415	19203412	19201415	19203412	-	transcript4338.chr19.nnic@NA	transcript4338.chr19.nnic	NA	19201415	19203412	Gene ID= novel_gene_chr19_4339 TPM= 4.67 Transcript Type= NA
chr19	19201416	19203424	19201416	19203424	-	ENST00000331552.11@NR2C2AP	ENST00000331552.11	protein_coding	19203023,19202791,19202470,19202331,19201416	19203424,19202881,19202575,19202398,19202041	Gene ID= ENSG00000184162.14 TPM= 18.68 Transcript Type= protein_coding
chr19	19276515	19304738	19276515	19304738	-	transcript4352.chr19.nic@SUGP1	transcript4352.chr19.nic	protein_coding	19303348,19302265,19296989,19280185,19279213,19278690,19277734,19276947,19276515	19304738,19302388,19297344,19280291,19279390,19278796,19277879,19277076,19276674	Gene ID= ENSG00000105705.15 TPM= 7.01 Transcript Type= NA
chr19	19320681	19358755	19320681	19358755	+	ENST00000262815.12@MAU2	ENST00000262815.12	protein_coding	19320681,19335718,19336122,19337170,19338845,19340846,19341252,19342535,19342776,19343837,19344849,19345304,19347280,19348889,19349155,19349325,19354355,19355264,19355708	19321135,19335735,19336187,19337265,19338939,19340873,19341407,19342681,19342866,19343940,19344926,19345369,19347366,19348938,19349232,19349436,19354445,19355391,19358755	Gene ID= ENSG00000129933.20 TPM= 37.36 Transcript Type= protein_coding
chr19	19405710	19506973	19405710	19506973	+	transcript4357.chr19.nic@GATAD2A	transcript4357.chr19.nic	protein_coding	19405710,19465340,19492306,19492581,19494294,19495754,19496052,19498443,19501118,19501969,19502331,19505344	19406019,19465614,19492438,19492712,19494383,19495885,19496219,19498722,19501416,19502043,19502526,19506973	Gene ID= ENSG00000167491.17 TPM= 8.37 Transcript Type= NA
chr19	19465340	19507341	19465340	19507341	+	ENST00000418032.3@GATAD2A	ENST00000418032.3	protein_coding	19465340,19492581,19495754,19496052,19498443,19501118,19502331,19505344	19465614,19492712,19495885,19496219,19498722,19501416,19502526,19507341	Gene ID= ENSG00000167491.17 TPM= 4.29 Transcript Type= nonsense_mediated_decay
chr19	19515755	19528198	19515755	19528198	+	ENST00000507754.8@NDUFA13	ENST00000507754.8	protein_coding	19515755,19526182,19527281,19527701,19528007	19516332,19526260,19527352,19527770,19528198	Gene ID= ENSG00000186010.18 TPM= 143.61 Transcript Type= protein_coding
chr19	19535731	19537578	19535731	19537578	+	transcript4377.chr19.nnic@NA	transcript4377.chr19.nnic	NA	19535731	19537578	Gene ID= novel_gene_chr19_4378 TPM= 5.84 Transcript Type= NA
chr19	19623669	19629387	19623669	19629387	-	transcript4416.chr19.nic@LPAR2	transcript4416.chr19.nic	protein_coding	19628092,19627754,19627397,19626543,19623669	19629387,19627969,19627504,19627284,19624569	Gene ID= ENSG00000064547.13 TPM= 3.5 Transcript Type= NA
chr19	19623669	19629387	19623669	19629387	-	transcript4419.chr19.nic@LPAR2	transcript4419.chr19.nic	protein_coding	19628092,19627397,19626543,19623669	19629387,19627969,19627284,19624569	Gene ID= ENSG00000064547.13 TPM= 9.34 Transcript Type= NA
chr19	19623669	19628239	19623669	19628239	-	ENST00000407877.7@LPAR2	ENST00000407877.7	protein_coding	19628092,19626543,19623669	19628239,19627284,19624569	Gene ID= ENSG00000064547.13 TPM= 21.02 Transcript Type= protein_coding
chr19	19623669	19628769	19623669	19628769	-	transcript4424.chr19.nic@LPAR2	transcript4424.chr19.nic	protein_coding	19626543,19623669	19628769,19624569	Gene ID= ENSG00000064547.13 TPM= 3.5 Transcript Type= NA
chr19	19629476	19643667	19629476	19643667	-	ENST00000203556.8@GMIP	ENST00000203556.8	protein_coding	19643511,19642535,19641976,19641810,19640446,19640296,19640085,19638402,19638159,19637920,19637365,19636917,19636707,19635644,19635415,19635025,19634792,19634507,19633803,19630471,19629476	19643667,19642619,19642051,19641867,19640571,19640360,19640192,19638482,19638329,19638057,19637561,19637029,19636796,19635721,19635569,19635213,19634929,19634703,19634190,19630537,19630336	Gene ID= ENSG00000089639.10 TPM= 35.03 Transcript Type= protein_coding
chr19	19645203	19663693	19645203	19663693	-	ENST00000357324.10@ATP13A1	ENST00000357324.10	protein_coding	19663271,19659898,19659601,19657336,19656994,19656847,19656660,19656054,19655878,19655528,19655316,19655119,19654543,19653969,19653784,19652595,19651689,19649741,19649567,19647599,19647414,19647129,19646205,19645874,19645647,19645203	19663693,19659987,19659791,19657408,19657149,19656916,19656766,19656183,19655933,19655654,19655453,19655239,19654700,19654144,19653894,19652720,19651797,19649940,19649663,19647759,19647528,19647325,19646347,19645985,19645790,19645532	Gene ID= ENSG00000105726.16 TPM= 65.39 Transcript Type= protein_coding
chr19	19645200	19663693	19645200	19663693	-	transcript4389.chr19.nnic@ATP13A1	transcript4389.chr19.nnic	protein_coding	19663271,19659898,19659601,19657336,19656994,19656847,19656660,19656054,19655878,19655528,19655316,19655119,19654543,19653969,19653784,19652595,19651689,19649741,19649567,19647599,19647414,19647129,19646205,19645874,19645647,19645200	19663693,19659987,19659824,19657408,19657149,19656916,19656766,19656183,19655933,19655654,19655453,19655239,19654700,19654144,19653894,19652720,19651797,19649940,19649663,19647759,19647528,19647325,19646347,19645985,19645790,19645532	Gene ID= ENSG00000105726.16 TPM= 70.06 Transcript Type= NA
chr19	19668796	19680952	19668796	19680952	+	ENST00000318110.9@ZNF101	ENST00000318110.9	protein_coding	19668796,19677864,19678726,19679181,19680856	19668966,19677990,19678786,19680554,19680952	Gene ID= ENSG00000181896.11 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr19	19668854	19683506	19668854	19683506	+	ENST00000592502.1@ZNF101	ENST00000592502.1	protein_coding	19668854,19677864,19678726,19679181	19668966,19677990,19678786,19683506	Gene ID= ENSG00000181896.11 TPM= 2.34 Transcript Type= protein_coding
chr19	19710471	19733097	19710471	19733097	-	ENST00000344099.3@ZNF14	ENST00000344099.3	protein_coding	19732956,19714361,19714091,19710471	19733097,19714487,19714151,19713089	Gene ID= ENSG00000105708.8 TPM= 10.51 Transcript Type= protein_coding
chr19	19748559	19751432	19748559	19751432	-	transcript4429.chr19.nnic@NA	transcript4429.chr19.nnic	NA	19748559	19751432	Gene ID= novel_gene_chr19_4430 TPM= 2.34 Transcript Type= NA
chr19	19785839	19788596	19785839	19788596	-	transcript4461.chr19.nnic@NA	transcript4461.chr19.nnic	NA	19785839	19788596	Gene ID= novel_gene_chr19_4462 TPM= 2.34 Transcript Type= NA
chr19	19798780	19821765	19798780	19821765	-	transcript4448.chr19.nnic@ZNF506	transcript4448.chr19.nnic	protein_coding	19821601,19806942,19806031,19798780	19821765,19807068,19806126,19799697	Gene ID= ENSG00000081665.13 TPM= 2.34 Transcript Type= NA
chr19	19806455	19807208	19806455	19807208	+	transcript4459.chr19.nnic@NA	transcript4459.chr19.nnic	NA	19806455	19807208	Gene ID= novel_gene_chr19_4460 TPM= 2.34 Transcript Type= NA
chr19	19865905	19894674	19865905	19894674	+	ENST00000589717.1@ZNF253	ENST00000589717.1	protein_coding	19865905,19878481,19880051,19891474	19865999,19878607,19880146,19894674	Gene ID= ENSG00000256771.3 TPM= 1.17 Transcript Type= protein_coding
chr19	20004418	20039506	20004418	20039506	-	ENST00000397165.6@ZNF682	ENST00000397165.6	protein_coding	20039343,20024250,20023004,20004418	20039506,20024376,20023099,20007275	Gene ID= ENSG00000197124.11 TPM= 2.34 Transcript Type= protein_coding
chr19	20037220	20038625	20037220	20038625	+	transcript4457.chr19.nnic@NA	transcript4457.chr19.nnic	NA	20037220	20038625	Gene ID= novel_gene_chr19_4458 TPM= 5.84 Transcript Type= NA
chr19	20247555	20258309	20247555	20258309	+	transcript4467.chr19.nnic@AC078899.3	transcript4467.chr19.nnic	unprocessed_pseudogene	20247555,20248282,20257251,20257643	20247699,20248447,20257430,20258309	Gene ID= ENSG00000268620.1 TPM= 2.34 Transcript Type= NA
chr19	20394552	20424968	20394552	20424968	-	transcript4473.chr19.nic@ZNF826P	transcript4473.chr19.nic	transcribed_unprocessed_pseudogene	20424786,20408950,20394552	20424968,20409045,20399038	Gene ID= ENSG00000231205.11 TPM= 3.5 Transcript Type= NA
chr19	20404967	20424969	20404967	20424969	-	ENST00000597334.1@ZNF826P	ENST00000597334.1	transcribed_unprocessed_pseudogene	20424786,20408950,20404967	20424969,20409045,20406132	Gene ID= ENSG00000231205.11 TPM= 1.17 Transcript Type= processed_transcript
chr19	20395955	20424956	20395955	20424956	-	ENST00000615684.4@ZNF826P	ENST00000615684.4	transcribed_unprocessed_pseudogene	20424786,20408950,20395955	20424956,20409024,20399038	Gene ID= ENSG00000231205.11 TPM= 1.17 Transcript Type= processed_transcript
chr19	20534932	20565803	20534932	20565803	-	transcript4479.chr19.nnic@ZNF737	transcript4479.chr19.nnic	protein_coding	20565638,20553709,20552475,20544619,20534932	20565803,20553835,20552570,20545976,20536133	Gene ID= ENSG00000237440.8 TPM= 2.34 Transcript Type= NA
chr19	20622249	20661595	20622249	20661595	-	transcript4485.chr19.nnic@ZNF626	transcript4485.chr19.nnic	protein_coding	20661444,20646279,20645684,20624505,20622249	20661595,20646405,20645779,20625650,20624337	Gene ID= ENSG00000188171.15 TPM= 5.84 Transcript Type= NA
chr19	20644702	20661596	20644702	20661596	-	ENST00000291750.6@ZNF626	ENST00000291750.6	protein_coding	20661444,20646279,20645684,20644702	20661596,20646405,20645779,20645448	Gene ID= ENSG00000188171.15 TPM= 2.34 Transcript Type= protein_coding
chr19	20746862	20750382	20746862	20750382	-	transcript4490.chr19.nnic@AC010329.1	transcript4490.chr19.nnic	lincRNA	20750238,20749987,20746862	20750382,20750132,20749604	Gene ID= ENSG00000268416.1 TPM= 3.5 Transcript Type= NA
chr19	20799067	20801715	20799067	20801715	-	transcript4555.chr19.nnic@NA	transcript4555.chr19.nnic	NA	20799067	20801715	Gene ID= novel_gene_chr19_4556 TPM= 2.34 Transcript Type= NA
chr19	20923288	20950697	20923288	20950697	+	ENST00000328178.12@ZNF85	ENST00000328178.12	protein_coding	20923288,20934024,20934949,20948744	20923403,20934150,20935047,20950697	Gene ID= ENSG00000105750.14 TPM= 2.34 Transcript Type= protein_coding
chr19	21020620	21060050	21020620	21060050	+	ENST00000261560.9@ZNF430	ENST00000261560.9	protein_coding	21020620,21022789,21033456,21034086,21056631	21020803,21022881,21033582,21034184,21060050	Gene ID= ENSG00000118620.12 TPM= 12.84 Transcript Type= protein_coding
chr19	21142011	21146427	21142011	21146427	+	transcript4543.chr19.nnic@ZNF431	transcript4543.chr19.nnic	protein_coding	21142011,21143551,21145275	21142186,21144347,21146427	Gene ID= ENSG00000196705.8 TPM= 2.34 Transcript Type= NA
chr19	21172328	21175582	21172328	21175582	-	transcript4557.chr19.nnic@NA	transcript4557.chr19.nnic	NA	21172328	21175582	Gene ID= novel_gene_chr19_4558 TPM= 3.5 Transcript Type= NA
chr19	21292604	21329425	21292604	21329425	-	ENST00000598046.5@ZNF708	ENST00000598046.5	protein_coding	21329210,21327960,21309246,21292604	21329425,21328141,21309341,21294739	Gene ID= ENSG00000182141.10 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr19	21358930	21379300	21358930	21379300	+	ENST00000311015.7@ZNF738	ENST00000311015.7	protein_coding	21358930,21361766,21375238,21375869,21377389	21359143,21361858,21375364,21375964,21379300	Gene ID= ENSG00000172687.13 TPM= 2.34 Transcript Type= protein_coding
chr19	21358992	21379302	21358992	21379302	+	ENST00000380870.8@ZNF738	ENST00000380870.8	protein_coding	21358992,21361766,21375238,21375869,21378629	21359143,21361858,21375364,21375964,21379302	Gene ID= ENSG00000172687.13 TPM= 1.17 Transcript Type= protein_coding
chr19	21397166	21398934	21397166	21398934	+	ENST00000599461.1@ZNF493	ENST00000599461.1	protein_coding	21397166	21398934	Gene ID= ENSG00000196268.11 TPM= 1.17 Transcript Type= protein_coding
chr19	21397133	21414643	21397133	21414643	+	ENST00000594390.5@ZNF493	ENST00000594390.5	protein_coding	21397133,21405129,21405761,21413466	21397267,21405255,21405856,21414643	Gene ID= ENSG00000196268.11 TPM= 2.34 Transcript Type= protein_coding
chr19	21505601	21538299	21505601	21538299	+	transcript4523.chr19.nnic@ZNF429	transcript4523.chr19.nnic	protein_coding	21505601,21529084,21529658,21530589,21536280	21505774,21529172,21529784,21530684,21538299	Gene ID= ENSG00000197013.9 TPM= 2.34 Transcript Type= NA
chr19	21538042	21540666	21538042	21540666	+	transcript4553.chr19.nnic@NA	transcript4553.chr19.nnic	NA	21538042	21540666	Gene ID= novel_gene_chr19_4554 TPM= 2.34 Transcript Type= NA
chr19	21722766	21767628	21722766	21767628	-	ENST00000358296.10@ZNF100	ENST00000358296.10	protein_coding	21767427,21765694,21744941,21744017,21722766	21767628,21765786,21745067,21744115,21727989	Gene ID= ENSG00000197020.10 TPM= 4.67 Transcript Type= protein_coding
chr19	21807326	21836208	21807326	21836208	-	ENST00000354959.8@ZNF43	ENST00000354959.8	protein_coding	21836036,21819095,21817888,21807326	21836208,21819221,21817986,21809807	Gene ID= ENSG00000198521.11 TPM= 2.34 Transcript Type= protein_coding
chr19	21834037	21834955	21834037	21834955	+	transcript4584.chr19.nnic@NA	transcript4584.chr19.nnic	NA	21834037	21834955	Gene ID= novel_gene_chr19_4585 TPM= 3.5 Transcript Type= NA
chr19	23269886	23274247	23269886	23274247	-	ENST00000638919.1@AC092329.4	ENST00000638919.1	processed_transcript	23274076,23269886	23274247,23270292	Gene ID= ENSG00000284428.1 TPM= 5.84 Transcript Type= lincRNA
chr19	23357696	23395560	23357696	23395560	-	ENST00000300619.11@ZNF91	ENST00000300619.11	protein_coding	23395325,23374638,23373742,23357696	23395560,23374764,23373837,23362725	Gene ID= ENSG00000167232.13 TPM= 2.34 Transcript Type= protein_coding
chr19	23739920	23758890	23739920	23758890	-	transcript4612.chr19.nnic@ZNF681	transcript4612.chr19.nnic	protein_coding	23758747,23739920	23758890,23745323	Gene ID= ENSG00000196172.9 TPM= 2.34 Transcript Type= NA
chr19	23939864	23944663	23939864	23944663	-	transcript4623.chr19.nnic@NA	transcript4623.chr19.nnic	NA	23939864	23944663	Gene ID= novel_gene_chr19_4624 TPM= 4.67 Transcript Type= NA
chr19	24033457	24129960	24033457	24129960	+	transcript4644.chr19.nnic@AC092279.1	transcript4644.chr19.nnic	lincRNA	24033457,24046184,24049405,24126254	24033621,24046279,24049548,24129960	Gene ID= ENSG00000268362.5 TPM= 2.34 Transcript Type= NA
chr19	24033402	24055232	24033402	24055232	+	transcript4650.chr19.nic@AC092279.1	transcript4650.chr19.nic	lincRNA	24033402,24046184,24049405	24033621,24046279,24055232	Gene ID= ENSG00000268362.5 TPM= 5.84 Transcript Type= NA
chr19	24033402	24128380	24033402	24128380	+	transcript4632.chr19.nnic@ZNF254	transcript4632.chr19.nnic	protein_coding	24033402,24046184,24048937,24105940,24106548,24126254	24033621,24046279,24049014,24106066,24106643,24128380	Gene ID= ENSG00000213096.10 TPM= 2.34 Transcript Type= NA
chr19	24033402	24129852	24033402	24129852	+	transcript4636.chr19.nnic@ZNF254	transcript4636.chr19.nnic	protein_coding	24033402,24046184,24049405,24105940,24106548,24126254	24033621,24046279,24049548,24106066,24106643,24129852	Gene ID= ENSG00000213096.10 TPM= 2.34 Transcript Type= NA
chr19	24033405	24129961	24033405	24129961	+	ENST00000613065.4@ZNF254	ENST00000613065.4	protein_coding	24033405,24046184,24105940,24106548,24126254	24033621,24046279,24106066,24106643,24129961	Gene ID= ENSG00000213096.10 TPM= 1.17 Transcript Type= protein_coding
chr19	24087160	24129961	24087160	24129961	+	ENST00000611359.3@ZNF254	ENST00000611359.3	protein_coding	24087160,24106548,24126254	24087337,24106643,24129961	Gene ID= ENSG00000213096.10 TPM= 1.17 Transcript Type= protein_coding
chr19	24087193	24129852	24087193	24129852	+	ENST00000357002.4@ZNF254	ENST00000357002.4	protein_coding	24087193,24105940,24106548,24126254	24087337,24106066,24106643,24129852	Gene ID= ENSG00000213096.10 TPM= 7.01 Transcript Type= protein_coding
chr19	27794040	27806782	27794040	27806782	+	transcript4659.chr19.nic@AC006504.5	transcript4659.chr19.nic	lincRNA	27794040,27797754,27805605	27794122,27798176,27806782	Gene ID= ENSG00000267575.6 TPM= 3.5 Transcript Type= NA
chr19	29207270	29213170	29207270	29213170	-	transcript4670.chr19.nnic@UQCRFS1	transcript4670.chr19.nnic	protein_coding	29213066,29212905,29207270	29213170,29213008,29208158	Gene ID= ENSG00000169021.5 TPM= 5.84 Transcript Type= NA
chr19	29205321	29213541	29205321	29213541	-	ENST00000304863.5@UQCRFS1	ENST00000304863.5	protein_coding	29212905,29205321	29213541,29208158	Gene ID= ENSG00000169021.5 TPM= 68.89 Transcript Type= protein_coding
chr19	29604017	29615800	29604017	29615800	+	ENST00000585603.5@POP4	ENST00000585603.5	protein_coding	29604017,29608657,29610409,29611862,29612117,29613871,29615244	29606325,29608709,29610632,29611939,29612178,29613972,29615800	Gene ID= ENSG00000105171.9 TPM= 25.69 Transcript Type= protein_coding
chr19	29665056	29675457	29665056	29675457	+	ENST00000436066.3@PLEKHF1	ENST00000436066.3	protein_coding	29665056,29673824	29665505,29675457	Gene ID= ENSG00000166289.5 TPM= 58.38 Transcript Type= protein_coding
chr19	29698886	29715056	29698886	29715056	-	ENST00000623113.1@C19orf12	ENST00000623113.1	protein_coding	29714907,29698886	29715056,29702977	Gene ID= ENSG00000131943.17 TPM= 2.34 Transcript Type= protein_coding
chr19	29701163	29715221	29701163	29715221	-	ENST00000392276.1@C19orf12	ENST00000392276.1	protein_coding	29715125,29701163	29715221,29702977	Gene ID= ENSG00000131943.17 TPM= 7.01 Transcript Type= protein_coding
chr19	29942212	30015695	29942212	30015695	+	transcript4697.chr19.nic@URI1	transcript4697.chr19.nic	protein_coding	29942212,29971193,29985223,29986282,30005361,30005651,30007470,30009005,30011094,30012285,30015536	29942664,29971227,29985301,29986417,30005452,30005708,30007638,30009353,30011236,30012531,30015695	Gene ID= ENSG00000105176.17 TPM= 8.17 Transcript Type= NA
chr19	29942212	30015709	29942212	30015709	+	transcript4704.chr19.nic@URI1	transcript4704.chr19.nic	protein_coding	29942212,29971193,29985223,29986282,30005361,30005651,30007470,30009005,30011094,30012285	29942664,29971227,29985301,29986417,30005452,30005708,30007638,30009353,30011236,30015709	Gene ID= ENSG00000105176.17 TPM= 3.5 Transcript Type= NA
chr19	29942261	30015704	29942261	30015704	+	ENST00000574110.5@URI1	ENST00000574110.5	protein_coding	29942261,29985223,29986282,30005361,30005651,30007470,30009005,30011094,30012285,30014887	29942664,29985301,29986417,30005452,30005708,30007638,30009353,30011236,30012531,30015704	Gene ID= ENSG00000105176.17 TPM= 24.52 Transcript Type= nonsense_mediated_decay
chr19	29942251	30016608	29942251	30016608	+	ENST00000392271.5@URI1	ENST00000392271.5	protein_coding	29942251,29971193,29985223,29986282,30005361,30005651,30007470,30009005,30011094,30012285,30014887	29942664,29971227,29985301,29986417,30005452,30005708,30007638,30009353,30011236,30012531,30016608	Gene ID= ENSG00000105176.17 TPM= 2.34 Transcript Type= protein_coding
chr19	31347081	31348481	31347081	31348481	+	transcript4717.chr19.nnic@NA	transcript4717.chr19.nnic	NA	31347081	31348481	Gene ID= novel_gene_chr19_4718 TPM= 2.34 Transcript Type= NA
chr19	32406091	32485889	32406091	32485889	+	transcript4728.chr19.nnic@DPY19L3	transcript4728.chr19.nnic	protein_coding	32406091,32408217,32411239,32432716,32436446,32437194,32439112,32439776,32453145,32458100,32458351,32463366,32463869,32464728,32468731,32477522,32480399,32482079	32406302,32408356,32411372,32432806,32436567,32437339,32439235,32439910,32453276,32458173,32458509,32463488,32463980,32464784,32468813,32477654,32480557,32485889	Gene ID= ENSG00000178904.18 TPM= 3.89 Transcript Type= NA
chr19	32405543	32413187	32405543	32413187	+	ENST00000587077.6@DPY19L3	ENST00000587077.6	protein_coding	32405543,32408217,32411239	32405909,32408356,32413187	Gene ID= ENSG00000178904.18 TPM= 1.17 Transcript Type= protein_coding
chr19	32405749	32485889	32405749	32485889	+	ENST00000392250.6@DPY19L3	ENST00000392250.6	protein_coding	32405749,32408217,32411239,32432716,32436446,32437194,32439112,32439776,32453145,32454939,32458100,32458351,32463366,32463869,32464728,32468731,32477522,32480399,32482079	32405909,32408356,32411372,32432806,32436567,32437339,32439235,32439910,32453276,32455040,32458173,32458509,32463488,32463980,32464784,32468813,32477654,32480557,32485889	Gene ID= ENSG00000178904.18 TPM= 2.72 Transcript Type= protein_coding
chr19	32406125	32485889	32406125	32485889	+	ENST00000342179.9@DPY19L3	ENST00000342179.9	protein_coding	32406125,32408217,32411239,32432716,32436446,32437194,32439112,32439776,32453145,32454939,32458100,32458351,32463366,32463869,32464728,32468731,32477522,32480399,32482079	32406302,32408356,32411372,32432806,32436567,32437339,32439235,32439910,32453276,32455040,32458173,32458509,32463488,32463980,32464784,32468813,32477654,32480557,32485889	Gene ID= ENSG00000178904.18 TPM= 6.22 Transcript Type= protein_coding
chr19	32581068	32587427	32581068	32587427	+	ENST00000590247.6@PDCD5	ENST00000590247.6	protein_coding	32581068,32582195,32584950,32585816,32586858,32587253	32581327,32582232,32585011,32585907,32586929,32587427	Gene ID= ENSG00000105185.11 TPM= 35.03 Transcript Type= protein_coding
chr19	32581201	32587387	32581201	32587387	+	ENST00000419343.7@PDCD5	ENST00000419343.7	protein_coding	32581201,32582195,32584950,32585816	32581327,32582232,32585011,32587387	Gene ID= ENSG00000105185.11 TPM= 1.17 Transcript Type= protein_coding
chr19	32597007	32675199	32597007	32675199	-	ENST00000306065.8@ANKRD27	ENST00000306065.8	protein_coding	32675071,32658914,32649682,32646459,32644325,32643572,32643431,32643287,32643123,32642024,32640307,32639356,32631402,32628722,32628083,32626712,32625874,32622422,32619494,32619260,32617589,32615658,32607635,32605835,32604263,32602015,32599972,32599704,32597007	32675199,32659045,32649792,32646615,32644479,32643631,32643484,32643352,32643199,32642145,32640385,32639488,32631494,32628849,32628165,32626827,32625966,32622619,32619553,32619379,32617633,32615780,32607832,32605954,32604424,32602126,32600050,32599776,32598378	Gene ID= ENSG00000105186.15 TPM= 68.69 Transcript Type= protein_coding
chr19	32597007	32675166	32597007	32675166	-	transcript4740.chr19.nic@ANKRD27	transcript4740.chr19.nic	protein_coding	32675071,32649682,32646459,32644325,32643572,32643431,32643287,32643123,32642024,32640307,32639356,32631402,32628722,32628083,32626712,32625874,32622422,32619494,32619260,32617589,32615658,32607635,32605835,32604263,32602015,32599972,32599704,32597007	32675166,32649792,32646615,32644479,32643631,32643484,32643352,32643199,32642145,32640385,32639488,32631494,32628849,32628165,32626827,32625966,32622619,32619553,32619379,32617633,32615780,32607832,32605954,32604424,32602126,32600050,32599776,32598378	Gene ID= ENSG00000105186.15 TPM= 6.81 Transcript Type= NA
chr19	32597007	32675202	32597007	32675202	-	transcript4741.chr19.nic@ANKRD27	transcript4741.chr19.nic	protein_coding	32675071,32658914,32649682,32644325,32643572,32643431,32643287,32643123,32642024,32640307,32639356,32631402,32628722,32628083,32626712,32625874,32622422,32619494,32619260,32617589,32615658,32607635,32605835,32604263,32602015,32599972,32599704,32597007	32675202,32659045,32649792,32644479,32643631,32643484,32643352,32643199,32642145,32640385,32639488,32631494,32628849,32628165,32626827,32625966,32622619,32619553,32619379,32617633,32615780,32607832,32605954,32604424,32602126,32600050,32599776,32598378	Gene ID= ENSG00000105186.15 TPM= 22.57 Transcript Type= NA
chr19	32629845	32675202	32629845	32675202	-	transcript4747.chr19.nic@ANKRD27	transcript4747.chr19.nic	protein_coding	32675071,32658914,32649682,32646459,32644325,32643572,32643431,32643287,32643123,32642024,32640307,32639356,32629845	32675202,32659045,32649792,32646615,32644479,32643631,32643484,32643352,32643199,32642145,32640385,32639488,32631494	Gene ID= ENSG00000105186.15 TPM= 2.34 Transcript Type= NA
chr19	32968909	32971991	32968909	32971991	-	ENST00000591863.1@CEP89	ENST00000591863.1	protein_coding	32971836,32968909	32971991,32971655	Gene ID= ENSG00000121289.17 TPM= 14.01 Transcript Type= protein_coding
chr19	32875925	32971963	32875925	32971963	-	ENST00000305768.9@CEP89	ENST00000305768.9	protein_coding	32971836,32966360,32959900,32953615,32948266,32939857,32937631,32933451,32931429,32926934,32926190,32923439,32918224,32915337,32901245,32899857,32887752,32881844,32875925	32971963,32966466,32960058,32953801,32948368,32939885,32937673,32933669,32931571,32926984,32926273,32923542,32918339,32915517,32901412,32899998,32887841,32882013,32879378	Gene ID= ENSG00000121289.17 TPM= 7.01 Transcript Type= protein_coding
chr19	32879009	32971955	32879009	32971955	-	ENST00000586984.6@CEP89	ENST00000586984.6	protein_coding	32971836,32966360,32959900,32953615,32948266,32939857,32937631,32933451,32931429,32926934,32926190,32918224,32915337,32901245,32899857,32887752,32881844,32879009	32971955,32966466,32960058,32953801,32948368,32939885,32937673,32933669,32931571,32926984,32926273,32918339,32915517,32901412,32899998,32887841,32882013,32879378	Gene ID= ENSG00000121289.17 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr19	33080880	33130542	33080880	33130542	+	ENST00000170564.6@GPATCH1	ENST00000170564.6	protein_coding	33080880,33088134,33090780,33093359,33094172,33095762,33096207,33097755,33101495,33106695,33109717,33111724,33112486,33113767,33114253,33117825,33119010,33125105,33126588,33130130	33081266,33088268,33090865,33093519,33094269,33095820,33096446,33097902,33101574,33106899,33110016,33111902,33112613,33113903,33114419,33118041,33119117,33125202,33126733,33130542	Gene ID= ENSG00000076650.6 TPM= 14.01 Transcript Type= protein_coding
chr19	33194273	33207639	33194273	33207639	+	transcript4785.chr19.nnic@LRP3	transcript4785.chr19.nnic	protein_coding	33194273,33196730,33202848,33204638,33205246,33206556,33206988	33194858,33196777,33202986,33204852,33206362,33206733,33207639	Gene ID= ENSG00000130881.13 TPM= 4.67 Transcript Type= NA
chr19	33207129	33207639	33207129	33207639	+	ENST00000609744.1@AC008738.7	ENST00000609744.1	3prime_overlapping_ncRNA	33207129	33207639	Gene ID= ENSG00000273420.1 TPM= 2.34 Transcript Type= 3prime_overlapping_ncRNA
chr19	33208664	33225850	33208664	33225850	-	ENST00000253188.8@SLC7A10	ENST00000253188.8	protein_coding	33225553,33215769,33212851,33212514,33212292,33211414,33211225,33210802,33210467,33209308,33208664	33225850,33215973,33213002,33212639,33212445,33211537,33211328,33210898,33210616,33209485,33209021	Gene ID= ENSG00000130876.11 TPM= 1.17 Transcript Type= protein_coding
chr19	33299934	33302564	33299934	33302564	-	ENST00000498907.2@CEBPA	ENST00000498907.2	protein_coding	33299934	33302564	Gene ID= ENSG00000245848.2 TPM= 258.04 Transcript Type= protein_coding
chr19	33303036	33305052	33303036	33305052	+	transcript4804.chr19.nnic@CEBPA-AS1	transcript4804.chr19.nnic	antisense_RNA	33303036,33304378	33303912,33305052	Gene ID= ENSG00000267296.2 TPM= 2.34 Transcript Type= NA
chr19	33302857	33305054	33302857	33305054	+	ENST00000592982.2@CEBPA-AS1	ENST00000592982.2	antisense_RNA	33302857	33305054	Gene ID= ENSG00000267296.2 TPM= 3.5 Transcript Type= antisense_RNA
chr19	33373330	33382686	33373330	33382686	+	ENST00000284000.8@CEBPG	ENST00000284000.8	protein_coding	33373330,33379144	33373895,33382686	Gene ID= ENSG00000153879.8 TPM= 105.08 Transcript Type= protein_coding
chr19	33386950	33521794	33386950	33521794	-	ENST00000244137.11@PEPD	ENST00000244137.11	protein_coding	33521744,33512593,33511028,33500938,33493290,33489996,33478046,33463987,33462995,33413575,33411672,33401721,33391295,33387890,33386950	33521794,33512776,33511155,33501001,33493337,33490057,33478090,33464062,33463041,33413643,33411749,33401869,33391479,33388081,33387481	Gene ID= ENSG00000124299.13 TPM= 230.02 Transcript Type= protein_coding
chr19	33386955	33395148	33386955	33395148	-	ENST00000591968.1@PEPD	ENST00000591968.1	protein_coding	33395110,33391295,33387890,33386955	33395148,33391479,33388081,33387481	Gene ID= ENSG00000124299.13 TPM= 10.51 Transcript Type= processed_transcript
chr19	33386980	33521791	33386980	33521791	-	ENST00000397032.8@PEPD	ENST00000397032.8	protein_coding	33521744,33512593,33511028,33500938,33493290,33489996,33478046,33413575,33411672,33401721,33391295,33387890,33386980	33521791,33512776,33511155,33501001,33493337,33490057,33478090,33413643,33411749,33401869,33391479,33388081,33387481	Gene ID= ENSG00000124299.13 TPM= 1.17 Transcript Type= protein_coding
chr19	33796422	33815761	33796422	33815761	+	transcript4829.chr19.nic@KCTD15	transcript4829.chr19.nic	protein_coding	33796422,33798668,33800428,33801167,33806863,33811247,33812790	33796525,33798766,33800520,33801342,33807007,33811552,33815761	Gene ID= ENSG00000153885.14 TPM= 12.26 Transcript Type= NA
chr19	33796820	33815761	33796820	33815761	+	transcript4832.chr19.nic@KCTD15	transcript4832.chr19.nic	protein_coding	33796820,33798668,33800428,33801167,33806863,33811247,33812790	33796987,33798766,33800520,33801342,33807007,33811552,33815761	Gene ID= ENSG00000153885.14 TPM= 21.6 Transcript Type= NA
chr19	33797995	33815761	33797995	33815761	+	transcript4837.chr19.nic@KCTD15	transcript4837.chr19.nic	protein_coding	33797995,33798671,33800428,33801167,33806863,33811247,33812790	33798390,33798766,33800520,33801342,33807007,33811552,33815761	Gene ID= ENSG00000153885.14 TPM= 16.35 Transcript Type= NA
chr19	33906352	33908391	33906352	33908391	+	ENST00000610908.1@AC008556.1	ENST00000610908.1	lincRNA	33906352	33908391	Gene ID= ENSG00000277013.1 TPM= 2.34 Transcript Type= lincRNA
chr19	34172490	34229279	34172490	34229279	+	transcript4860.chr19.nic@LSM14A	transcript4860.chr19.nic	protein_coding	34172490,34194478,34196634,34208929,34215596,34219391,34219706,34221507,34227365	34172763,34194641,34196763,34209051,34215661,34219573,34219877,34221738,34229279	Gene ID= ENSG00000257103.8 TPM= 7.01 Transcript Type= NA
chr19	34172568	34229288	34172568	34229288	+	ENST00000433627.9@LSM14A	ENST00000433627.9	protein_coding	34172568,34194478,34196634,34208929,34215124,34215596,34219391,34219706,34221507,34226408,34227365	34172763,34194641,34196763,34209051,34215300,34215661,34219573,34219877,34221738,34226464,34229288	Gene ID= ENSG00000257103.8 TPM= 7.01 Transcript Type= protein_coding
chr19	34254537	34355586	34254537	34355586	+	ENST00000299505.6@KIAA0355	ENST00000299505.6	protein_coding	34254537,34299679,34319907,34327421,34327771,34327990,34330189,34333704,34339867,34341422,34347877,34349016,34351514,34352647	34254614,34300968,34320116,34327561,34327866,34328151,34330347,34333801,34339992,34342455,34348042,34349153,34351592,34355586	Gene ID= ENSG00000166398.12 TPM= 15.18 Transcript Type= protein_coding
chr19	34263138	34264688	34263138	34264688	-	transcript4869.chr19.nnic@NA	transcript4869.chr19.nnic	NA	34263138	34264688	Gene ID= novel_gene_chr19_4870 TPM= 2.34 Transcript Type= NA
chr19	34308240	34311903	34308240	34311903	-	transcript4871.chr19.nnic@NA	transcript4871.chr19.nnic	NA	34308240	34311903	Gene ID= novel_gene_chr19_4872 TPM= 7.01 Transcript Type= NA
chr19	34364982	34400335	34364982	34400335	+	ENST00000588991.6@GPI	ENST00000588991.6	protein_coding	34364982,34365260,34366345,34366783,34368583,34377503,34377735,34378934,34379518,34381466,34393248,34393728,34393914,34396301,34396581,34399207,34399556,34399719,34399901	34365019,34365388,34366435,34366851,34368702,34377586,34377881,34379005,34379562,34381519,34393308,34393771,34394066,34396430,34396657,34399335,34399631,34399785,34400335	Gene ID= ENSG00000105220.14 TPM= 32.11 Transcript Type= protein_coding
chr19	34365026	34400328	34365026	34400328	+	ENST00000356487.9@GPI	ENST00000356487.9	protein_coding	34365026,34366345,34366783,34368583,34377503,34377735,34378934,34379518,34381466,34393248,34393728,34393914,34396301,34396581,34399207,34399556,34399719,34399901	34365388,34366435,34366851,34368702,34377586,34377881,34379005,34379562,34381519,34393308,34393771,34394066,34396430,34396657,34399335,34399631,34399785,34400328	Gene ID= ENSG00000105220.14 TPM= 223.59 Transcript Type= protein_coding
chr19	34404384	34426167	34404384	34426167	+	ENST00000246535.3@PDCD2L	ENST00000246535.3	protein_coding	34404384,34404649,34404930,34409161,34413737,34421519,34425990	34404538,34404815,34404990,34409510,34413847,34421667,34426167	Gene ID= ENSG00000126249.7 TPM= 7.01 Transcript Type= protein_coding
chr19	34428367	34469890	34428367	34469890	+	transcript4890.chr19.nic@UBA2	transcript4890.chr19.nic	protein_coding	34428367,34430093,34430576,34431861,34433348,34434868,34438645,34443844,34445000,34450265,34451981,34454260,34454444,34458769,34460470,34464026,34466878,34469040	34428570,34430186,34430659,34431931,34433412,34434968,34438766,34443911,34445121,34450364,34452147,34454353,34454556,34458924,34460566,34464131,34467014,34469890	Gene ID= ENSG00000126261.12 TPM= 16.54 Transcript Type= NA
chr19	34481689	34501171	34481689	34501171	+	transcript4900.chr19.nnic@WTIP	transcript4900.chr19.nnic	protein_coding	34481689,34483030,34490376,34493037,34493263,34493492,34494586,34495703,34500129	34482641,34483147,34490477,34493104,34493325,34493622,34494637,34495771,34501171	Gene ID= ENSG00000142279.12 TPM= 7.59 Transcript Type= NA
chr19	34492109	34493907	34492109	34493907	-	transcript4913.chr19.nnic@NA	transcript4913.chr19.nnic	NA	34492109	34493907	Gene ID= novel_gene_chr19_4914 TPM= 3.5 Transcript Type= NA
chr19	34504138	34506346	34504138	34506346	+	transcript4911.chr19.nnic@NA	transcript4911.chr19.nnic	NA	34504138	34506346	Gene ID= novel_gene_chr19_4912 TPM= 3.5 Transcript Type= NA
chr19	34677950	34686392	34677950	34686392	+	transcript4919.chr19.nic@ZNF302	transcript4919.chr19.nic	protein_coding	34677950,34678737,34679828,34682777,34683155,34684252	34678103,34678813,34679959,34682897,34683238,34686392	Gene ID= ENSG00000089335.20 TPM= 2.53 Transcript Type= NA
chr19	34677639	34685237	34677639	34685237	+	ENST00000627982.2@ZNF302	ENST00000627982.2	protein_coding	34677639,34678737,34682777,34683152,34683992,34684192,34684308	34677856,34678813,34682897,34683238,34684169,34684303,34685237	Gene ID= ENSG00000089335.20 TPM= 1.17 Transcript Type= protein_coding
chr19	34677662	34686397	34677662	34686397	+	ENST00000457781.6@ZNF302	ENST00000457781.6	protein_coding	34677662,34678737,34682777,34683155,34684252	34677833,34678813,34682897,34683238,34686397	Gene ID= ENSG00000089335.20 TPM= 13.04 Transcript Type= protein_coding
chr19	34677678	34686392	34677678	34686392	+	ENST00000505242.5@ZNF302	ENST00000505242.5	protein_coding	34677678,34678737,34682777,34683155,34684252	34678103,34678813,34682897,34683238,34686392	Gene ID= ENSG00000089335.20 TPM= 8.37 Transcript Type= protein_coding
chr19	34677689	34686392	34677689	34686392	+	transcript4926.chr19.nic@ZNF302	transcript4926.chr19.nic	protein_coding	34677689,34678737,34682777,34683155,34684252	34677796,34678813,34682897,34683238,34686392	Gene ID= ENSG00000089335.20 TPM= 2.53 Transcript Type= NA
chr19	34677670	34686392	34677670	34686392	+	transcript4928.chr19.nic@ZNF302	transcript4928.chr19.nic	protein_coding	34677670,34682777,34683155,34684252	34678813,34682897,34683238,34686392	Gene ID= ENSG00000089335.20 TPM= 7.2 Transcript Type= NA
chr19	34677689	34686391	34677689	34686391	+	ENST00000423823.6@ZNF302	ENST00000423823.6	protein_coding	34677689,34678737,34682777,34683155,34684252	34677856,34678813,34682897,34683238,34686391	Gene ID= ENSG00000089335.20 TPM= 18.88 Transcript Type= protein_coding
chr19	34677654	34684172	34677654	34684172	+	ENST00000506901.5@ZNF302	ENST00000506901.5	protein_coding	34677654,34678737,34682777,34683152,34683992	34677862,34678813,34682897,34683238,34684172	Gene ID= ENSG00000089335.20 TPM= 1.17 Transcript Type= protein_coding
chr19	34677717	34686332	34677717	34686332	+	ENST00000446502.6@ZNF302	ENST00000446502.6	protein_coding	34677717,34678737,34679828,34682777,34683155,34684252	34677856,34678813,34679959,34682897,34683238,34686332	Gene ID= ENSG00000089335.20 TPM= 1.17 Transcript Type= protein_coding
chr19	34733309	34734493	34733309	34734493	-	transcript4939.chr19.nnic@NA	transcript4939.chr19.nnic	NA	34733309	34734493	Gene ID= novel_gene_chr19_4940 TPM= 2.34 Transcript Type= NA
chr19	34734179	34742872	34734179	34742872	+	transcript4932.chr19.nic@ZNF181	transcript4932.chr19.nic	protein_coding	34734179,34734970,34739148,34739523,34740611	34734360,34735046,34739268,34739621,34742872	Gene ID= ENSG00000197841.14 TPM= 10.51 Transcript Type= NA
chr19	34762795	34773229	34762795	34773229	-	ENST00000587354.6@ZNF599	ENST00000587354.6	protein_coding	34772824,34769429,34767316,34762795	34773229,34769555,34767411,34765641	Gene ID= ENSG00000153896.17 TPM= 1.17 Transcript Type= protein_coding
chr19	34766968	34773200	34766968	34773200	-	ENST00000588760.1@ZNF599	ENST00000588760.1	protein_coding	34772824,34769429,34766968	34773200,34769555,34767411	Gene ID= ENSG00000153896.17 TPM= 2.34 Transcript Type= protein_coding
chr19	34926902	34945168	34926902	34945168	+	transcript4950.chr19.nic@ZNF30	transcript4950.chr19.nic	protein_coding	34926902,34929884,34931843,34933625,34942594,34943223	34927216,34929956,34931993,34933723,34942673,34945168	Gene ID= ENSG00000168661.14 TPM= 2.34 Transcript Type= NA
chr19	34926903	34945164	34926903	34945164	+	ENST00000303586.11@ZNF30	ENST00000303586.11	protein_coding	34926903,34929884,34931843,34933625,34943223	34927216,34929956,34931993,34933723,34945164	Gene ID= ENSG00000168661.14 TPM= 2.34 Transcript Type= protein_coding
chr19	34926980	34945168	34926980	34945168	+	ENST00000601957.5@ZNF30	ENST00000601957.5	protein_coding	34926980,34929884,34931843,34933628,34942594,34943223	34927216,34929956,34931993,34933723,34942673,34945168	Gene ID= ENSG00000168661.14 TPM= 3.5 Transcript Type= protein_coding
chr19	34956353	34964275	34956353	34964275	-	transcript4959.chr19.nnic@ZNF792	transcript4959.chr19.nnic	protein_coding	34963630,34956353	34964275,34959571	Gene ID= ENSG00000180884.9 TPM= 2.34 Transcript Type= NA
chr19	34956354	34964049	34956354	34964049	-	ENST00000404801.1@ZNF792	ENST00000404801.1	protein_coding	34963630,34960868,34960235,34956354	34964049,34960994,34960357,34959571	Gene ID= ENSG00000180884.9 TPM= 5.84 Transcript Type= protein_coding
chr19	35000266	35026469	35000266	35026469	+	transcript4968.chr19.nic@GRAMD1A	transcript4968.chr19.nic	protein_coding	35000266,35009119,35009423,35009888,35010092,35010284,35011474,35013256,35013541,35014189,35015824,35019191,35019391,35021502,35021691,35021951,35023427,35026049	35000486,35009329,35009443,35009972,35010195,35010379,35011554,35013368,35013691,35014387,35015967,35019309,35019533,35021605,35021864,35023343,35023547,35026469	Gene ID= ENSG00000089351.14 TPM= 10.33 Transcript Type= NA
chr19	35000287	35026469	35000287	35026469	+	ENST00000317991.9@GRAMD1A	ENST00000317991.9	protein_coding	35000287,35009119,35009423,35009888,35010092,35010284,35011474,35013256,35013541,35014189,35015824,35019191,35019391,35021502,35021691,35021951,35022900,35023236,35023427,35026049	35000486,35009329,35009443,35009972,35010195,35010379,35011554,35013368,35013691,35014387,35015967,35019309,35019533,35021605,35021864,35022038,35022911,35023343,35023547,35026469	Gene ID= ENSG00000089351.14 TPM= 125.92 Transcript Type= protein_coding
chr19	35000323	35026469	35000323	35026469	+	ENST00000600231.5@GRAMD1A	ENST00000600231.5	protein_coding	35000323,35009119,35009423,35009888,35010092,35010284,35011474,35013541,35014189,35015824,35019191,35019391,35021502,35021691,35021951,35023236,35023427,35026049	35000486,35009329,35009443,35009972,35010195,35010379,35011554,35013691,35014387,35015967,35019309,35019533,35021605,35021864,35022038,35023343,35023547,35026469	Gene ID= ENSG00000089351.14 TPM= 32.52 Transcript Type= nonsense_mediated_decay
chr19	35000456	35010639	35000456	35010639	+	ENST00000424536.2@GRAMD1A	ENST00000424536.2	protein_coding	35000456,35009119,35009423,35009888,35010092,35010284	35000486,35009329,35009443,35009972,35010195,35010639	Gene ID= ENSG00000089351.14 TPM= 1.17 Transcript Type= protein_coding
chr19	35030423	35040449	35030423	35040449	+	transcript4982.chr19.nnic@SCN1B	transcript4982.chr19.nnic	protein_coding	35030423,35032528,35033499,35039117,35039635,35039797,35040086	35030860,35032694,35033739,35039258,35039706,35040014,35040449	Gene ID= ENSG00000105711.11 TPM= 8.17 Transcript Type= NA
chr19	35036899	35040449	35036899	35040449	+	ENST00000602150.2@SCN1B	ENST00000602150.2	protein_coding	35036899,35039797	35039706,35040449	Gene ID= ENSG00000105711.11 TPM= 3.5 Transcript Type= retained_intron
chr19	35030466	35040449	35030466	35040449	+	ENST00000262631.10@SCN1B	ENST00000262631.10	protein_coding	35030466,35032528,35033499,35039117,35039635,35039797	35030860,35032694,35033739,35039258,35039706,35040449	Gene ID= ENSG00000105711.11 TPM= 19.85 Transcript Type= protein_coding
chr19	35041260	35066571	35041260	35066571	+	transcript4989.chr19.nic@HPN	transcript4989.chr19.nic	protein_coding	35041260,35042453,35049290,35049475,35059673,35059874,35060129,35060347,35060627,35065250,35065539,35065868,35066249	35041872,35042522,35049391,35049516,35059802,35059996,35060169,35060512,35060817,35065345,35065681,35066032,35066571	Gene ID= ENSG00000105707.13 TPM= 19.27 Transcript Type= NA
chr19	35041260	35066571	35041260	35066571	+	transcript4993.chr19.nic@HPN	transcript4993.chr19.nic	protein_coding	35041260,35042453,35049290,35049475,35059673,35059874,35060129,35060347,35060627,35065250,35065539,35065868	35041872,35042522,35049391,35049516,35059802,35059996,35060169,35060512,35060817,35065345,35065681,35066571	Gene ID= ENSG00000105707.13 TPM= 2.92 Transcript Type= NA
chr19	35041706	35066571	35041706	35066571	+	transcript4995.chr19.nic@HPN	transcript4995.chr19.nic	protein_coding	35041706,35049290,35049475,35059673,35059874,35060129,35060347,35060627,35065250,35065539,35065868,35066249	35042522,35049391,35049516,35059802,35059996,35060169,35060512,35060817,35065345,35065681,35066032,35066571	Gene ID= ENSG00000105707.13 TPM= 14.01 Transcript Type= NA
chr19	35046118	35048029	35046118	35048029	+	transcript5003.chr19.nnic@NA	transcript5003.chr19.nnic	NA	35046118	35048029	Gene ID= novel_gene_chr19_5004 TPM= 2.34 Transcript Type= NA
chr19	35116262	35123655	35116262	35123655	+	ENST00000604255.5@FXYD3	ENST00000604255.5	protein_coding	35116262,35117257,35119168,35119363,35121078,35121222,35122765,35122918,35123271,35123441	35116359,35117378,35119251,35119416,35121110,35121245,35122839,35122954,35123308,35123655	Gene ID= ENSG00000089356.18 TPM= 1.17 Transcript Type= protein_coding
chr19	35115941	35123657	35115941	35123657	+	ENST00000603181.5@FXYD3	ENST00000603181.5	protein_coding	35115941,35116264,35119168,35119363,35121078,35121222,35122765,35122918,35123271,35123441	35116040,35116359,35119251,35119416,35121110,35121245,35122839,35122954,35123308,35123657	Gene ID= ENSG00000089356.18 TPM= 9.34 Transcript Type= protein_coding
chr19	35118462	35123657	35118462	35123657	+	transcript5009.chr19.nnic@FXYD3	transcript5009.chr19.nnic	protein_coding	35118462,35119168,35119363,35121078,35121222,35122765,35122918,35123271,35123441	35118599,35119251,35119416,35121110,35121245,35122839,35122954,35123308,35123657	Gene ID= ENSG00000089356.18 TPM= 3.5 Transcript Type= NA
chr19	35116096	35124324	35116096	35124324	+	transcript5013.chr19.nic@FXYD3	transcript5013.chr19.nic	protein_coding	35116096,35119363,35121078,35121222,35122765,35122918,35123271,35123441	35116359,35119416,35121110,35121245,35122839,35122954,35123308,35124324	Gene ID= ENSG00000089356.18 TPM= 16.35 Transcript Type= NA
chr19	35116319	35123615	35116319	35123615	+	ENST00000604804.5@FXYD3	ENST00000604804.5	protein_coding	35116319,35119363,35121078,35121222,35122678,35122918,35123271,35123441	35116359,35119416,35121110,35121245,35122839,35122954,35123308,35123615	Gene ID= ENSG00000089356.18 TPM= 1.17 Transcript Type= protein_coding
chr19	35118530	35123657	35118530	35123657	+	ENST00000604621.5@FXYD3	ENST00000604621.5	protein_coding	35118530,35119363,35121078,35121222,35122765,35122918,35123271,35123441	35118599,35119416,35121110,35121245,35122839,35122954,35123308,35123657	Gene ID= ENSG00000089356.18 TPM= 5.84 Transcript Type= protein_coding
chr19	35116318	35117762	35116318	35117762	+	transcript5023.chr19.nnic@NA	transcript5023.chr19.nnic	NA	35116318	35117762	Gene ID= novel_gene_chr19_5024 TPM= 5.84 Transcript Type= NA
chr19	35124513	35135200	35124513	35135200	-	ENST00000310123.7@LGI4	ENST00000310123.7	protein_coding	35134511,35134033,35133693,35131971,35131789,35131386,35126853,35126270,35124513	35135200,35134104,35133764,35132042,35131860,35131555,35127017,35126775,35125507	Gene ID= ENSG00000153902.13 TPM= 17.51 Transcript Type= protein_coding
chr19	35139441	35143050	35139441	35143050	+	ENST00000455515.6@FXYD1	ENST00000455515.6	protein_coding	35139441,35140076,35140597,35141132,35141536,35142472,35142720,35142917	35139588,35140140,35140629,35141206,35141572,35142521,35142771,35143050	Gene ID= ENSG00000266964.5 TPM= 5.45 Transcript Type= protein_coding
chr19	35140105	35143052	35140105	35143052	+	ENST00000589121.1@FXYD1	ENST00000589121.1	protein_coding	35140105,35140597,35141132,35141443,35142472,35142720,35142917	35140140,35140629,35141206,35141572,35142521,35142771,35143052	Gene ID= ENSG00000266964.5 TPM= 8.96 Transcript Type= protein_coding
chr19	35139726	35143048	35139726	35143048	+	ENST00000588715.5@FXYD1	ENST00000588715.5	protein_coding	35139726,35140076,35140597,35141132,35141536,35142472,35142720,35142917	35139767,35140140,35140629,35141206,35141572,35142521,35142771,35143048	Gene ID= ENSG00000266964.5 TPM= 3.12 Transcript Type= protein_coding
chr19	35154718	35169881	35154718	35169881	+	transcript5042.chr19.nnic@FXYD5	transcript5042.chr19.nnic	protein_coding	35154718,35155551,35157421,35158344,35164156,35166142,35166251,35169566	35154809,35155611,35157501,35158400,35164245,35166171,35166325,35169881	Gene ID= ENSG00000089327.14 TPM= 10.51 Transcript Type= NA
chr19	35154753	35169859	35154753	35169859	+	ENST00000541435.6@FXYD5	ENST00000541435.6	protein_coding	35154753,35155551,35157421,35158344,35160709,35164156,35166142,35166251,35169566	35154869,35155611,35157501,35158400,35160801,35164245,35166171,35166325,35169859	Gene ID= ENSG00000089327.14 TPM= 12.84 Transcript Type= protein_coding
chr19	35154743	35169883	35154743	35169883	+	ENST00000392219.6@FXYD5	ENST00000392219.6	protein_coding	35154743,35155551,35157421,35158344,35160709,35164156,35166142,35166251,35169566	35154809,35155611,35157501,35158400,35160801,35164245,35166171,35166325,35169883	Gene ID= ENSG00000089327.14 TPM= 82.9 Transcript Type= protein_coding
chr19	35248765	35267962	35248765	35267962	+	ENST00000360798.7@LSR	ENST00000360798.7	protein_coding	35248765,35250315,35258945,35266359,35266679,35266836,35267109,35267824	35249131,35250659,35259064,35266532,35266738,35266967,35267734,35267962	Gene ID= ENSG00000105699.16 TPM= 65.77 Transcript Type= protein_coding
chr19	35248772	35267964	35248772	35267964	+	ENST00000354900.7@LSR	ENST00000354900.7	protein_coding	35248772,35250315,35258945,35262546,35266359,35266679,35266836,35267109,35267824	35249131,35250659,35259064,35262692,35266532,35266738,35266967,35267734,35267964	Gene ID= ENSG00000105699.16 TPM= 152.17 Transcript Type= protein_coding
chr19	35267875	35268974	35267875	35268974	-	transcript5073.chr19.nnic@NA	transcript5073.chr19.nnic	NA	35267875	35268974	Gene ID= novel_gene_chr19_5074 TPM= 3.5 Transcript Type= NA
chr19	35269126	35279810	35269126	35279810	+	transcript5057.chr19.nic@USF2	transcript5057.chr19.nic	protein_coding	35269126,35269581,35269803,35270447,35270718,35271083,35278698,35278946,35279167	35269492,35269699,35270003,35270597,35270805,35271141,35278792,35279074,35279810	Gene ID= ENSG00000105698.15 TPM= 11.68 Transcript Type= NA
chr19	35269065	35279812	35269065	35279812	+	ENST00000222305.7@USF2	ENST00000222305.7	protein_coding	35269065,35269446,35269581,35269803,35270447,35270718,35271083,35278698,35278946,35279167	35269163,35269492,35269699,35270003,35270597,35270805,35271141,35278792,35279074,35279812	Gene ID= ENSG00000105698.15 TPM= 86.4 Transcript Type= protein_coding
chr19	35276071	35278464	35276071	35278464	-	transcript5071.chr19.nnic@NA	transcript5071.chr19.nnic	NA	35276071	35278464	Gene ID= novel_gene_chr19_5072 TPM= 23.35 Transcript Type= NA
chr19	35497220	35510527	35497220	35510527	-	transcript5093.chr19.nic@DMKN	transcript5093.chr19.nic	protein_coding	35510379,35510184,35509911,35505939,35505718,35502830,35502136,35500533,35499958,35498874,35498716,35497647,35497220	35510527,35510252,35509961,35505986,35505765,35502886,35502183,35500580,35500029,35498897,35498763,35497681,35497538	Gene ID= ENSG00000161249.20 TPM= 2.34 Transcript Type= NA
chr19	35497220	35510527	35497220	35510527	-	transcript5103.chr19.nic@DMKN	transcript5103.chr19.nic	protein_coding	35510379,35510184,35509911,35505939,35505718,35502830,35502136,35500533,35499958,35498874,35498716,35497220	35510527,35510252,35509961,35505986,35505765,35502886,35502183,35500580,35500029,35498897,35498763,35497538	Gene ID= ENSG00000161249.20 TPM= 2.34 Transcript Type= NA
chr19	35497220	35510431	35497220	35510431	-	ENST00000402589.6@DMKN	ENST00000402589.6	protein_coding	35510371,35510184,35509911,35505939,35505718,35502830,35502136,35500533,35500378,35499958,35498874,35498716,35497220	35510431,35510252,35509961,35505986,35505765,35502886,35502183,35500580,35500419,35500029,35498897,35498763,35497538	Gene ID= ENSG00000161249.20 TPM= 2.34 Transcript Type= protein_coding
chr19	35497220	35497933	35497220	35497933	-	ENST00000472365.6@DMKN	ENST00000472365.6	protein_coding	35497647,35497220	35497933,35497538	Gene ID= ENSG00000161249.20 TPM= 2.34 Transcript Type= retained_intron
chr19	35497220	35513652	35497220	35513652	-	ENST00000339686.7@DMKN	ENST00000339686.7	protein_coding	35513050,35512590,35512421,35511763,35511411,35510184,35509911,35505939,35505718,35502830,35502136,35500533,35499958,35498874,35498716,35497220	35513652,35512790,35512477,35511813,35511593,35510252,35509961,35505986,35505765,35502886,35502183,35500580,35500029,35498897,35498763,35497538	Gene ID= ENSG00000161249.20 TPM= 3.5 Transcript Type= protein_coding
chr19	35497220	35510439	35497220	35510439	-	ENST00000462721.5@DMKN	ENST00000462721.5	protein_coding	35510379,35510184,35509911,35505939,35505718,35502830,35502136,35500533,35500378,35499958,35498874,35498716,35497647,35497220	35510439,35510252,35509961,35505986,35505765,35502886,35502183,35500580,35500419,35500029,35498897,35498763,35497681,35497538	Gene ID= ENSG00000161249.20 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr19	35503306	35510470	35503306	35510470	-	ENST00000392206.6@DMKN	ENST00000392206.6	protein_coding	35510371,35510184,35509911,35505939,35505718,35503306	35510470,35510252,35509961,35505986,35505765,35503447	Gene ID= ENSG00000161249.20 TPM= 2.34 Transcript Type= protein_coding
chr19	35545595	35547526	35545595	35547526	+	ENST00000222284.9@TMEM147	ENST00000222284.9	protein_coding	35545595,35545888,35546526,35546672,35546945,35547119,35547324	35545816,35545957,35546585,35546808,35547029,35547240,35547526	Gene ID= ENSG00000105677.11 TPM= 119.09 Transcript Type= protein_coding
chr19	35545630	35547526	35545630	35547526	+	ENST00000392204.6@TMEM147	ENST00000392204.6	protein_coding	35545630,35546526,35546672,35546945,35547119,35547324	35545957,35546585,35546808,35547029,35547240,35547526	Gene ID= ENSG00000105677.11 TPM= 16.35 Transcript Type= protein_coding
chr19	35545674	35547526	35545674	35547526	+	ENST00000599895.1@TMEM147	ENST00000599895.1	protein_coding	35545674,35545888,35546526,35546672,35547324	35545816,35545957,35546585,35547240,35547526	Gene ID= ENSG00000105677.11 TPM= 12.84 Transcript Type= retained_intron
chr19	35612770	35625349	35612770	35625349	+	ENST00000203166.9@HAUS5	ENST00000203166.9	protein_coding	35612770,35613730,35613868,35614035,35615042,35615227,35617124,35617287,35617855,35618071,35618402,35618569,35618887,35619424,35619613,35620012,35620195,35622601,35622876	35612892,35613792,35613900,35614059,35615147,35615386,35617193,35617369,35617912,35618195,35618465,35618699,35619049,35619504,35619758,35620123,35620327,35622733,35625349	Gene ID= ENSG00000249115.8 TPM= 7.01 Transcript Type= protein_coding
chr19	35629016	35637686	35629016	35637686	+	transcript5141.chr19.nic@RBM42	transcript5141.chr19.nic	protein_coding	35629016,35629520,35631140,35631331,35633098,35633687,35634256,35637158,35637442	35629281,35629673,35631224,35631405,35633252,35634019,35634373,35637352,35637686	Gene ID= ENSG00000126254.11 TPM= 65.15 Transcript Type= NA
chr19	35629049	35637686	35629049	35637686	+	ENST00000262633.8@RBM42	ENST00000262633.8	protein_coding	35629049,35629520,35631140,35631331,35632936,35633077,35633687,35634256,35637158,35637442	35629281,35629673,35631224,35631405,35633001,35633252,35634019,35634373,35637352,35637686	Gene ID= ENSG00000126254.11 TPM= 110.69 Transcript Type= protein_coding
chr19	35629030	35637686	35629030	35637686	+	ENST00000588161.5@RBM42	ENST00000588161.5	protein_coding	35629030,35629520,35631140,35631331,35633101,35633687,35634256,35637158,35637442	35629281,35629673,35631224,35631405,35633252,35634019,35634373,35637352,35637686	Gene ID= ENSG00000126254.11 TPM= 67.49 Transcript Type= protein_coding
chr19	35648223	35658861	35648223	35658861	+	ENST00000246554.7@COX6B1	ENST00000246554.7	protein_coding	35648223,35651233,35654571,35658594	35648403,35651349,35654671,35658861	Gene ID= ENSG00000126267.8 TPM= 85.23 Transcript Type= protein_coding
chr19	35739252	35742459	35739252	35742459	-	transcript5179.chr19.nnic@IGFLR1	transcript5179.chr19.nnic	protein_coding	35742396,35741024,35739710,35739252	35742459,35741223,35740088,35739626	Gene ID= ENSG00000126246.9 TPM= 7.01 Transcript Type= NA
chr19	35739234	35742459	35739234	35742459	-	transcript5184.chr19.nic@IGFLR1	transcript5184.chr19.nic	protein_coding	35742396,35741024,35739234	35742459,35741223,35739626	Gene ID= ENSG00000126246.9 TPM= 5.84 Transcript Type= NA
chr19	35738801	35741313	35738801	35741313	-	transcript5177.chr19.nic@AD000671.2	transcript5177.chr19.nic	protein_coding	35741024,35740380,35739710,35738801	35741313,35740564,35740088,35739626	Gene ID= ENSG00000267120.3 TPM= 4.67 Transcript Type= NA
chr19	35745591	35747002	35745591	35747002	+	transcript5164.chr19.nnic@PSENEN	transcript5164.chr19.nnic	protein_coding	35745591,35745835,35746419,35746708,35746924	35745700,35745991,35746523,35746763,35747002	Gene ID= ENSG00000205155.7 TPM= 2.34 Transcript Type= NA
chr19	35745114	35747519	35745114	35747519	+	ENST00000587708.6@PSENEN	ENST00000587708.6	protein_coding	35745114,35745835,35746419,35746708	35745700,35745991,35746523,35747519	Gene ID= ENSG00000205155.7 TPM= 26.85 Transcript Type= protein_coding
chr19	35745600	35746993	35745600	35746993	+	ENST00000591949.1@PSENEN	ENST00000591949.1	protein_coding	35745600,35745835,35746419	35745700,35745991,35746993	Gene ID= ENSG00000205155.7 TPM= 2.34 Transcript Type= protein_coding
chr19	35745619	35747004	35745619	35747004	+	ENST00000222266.2@PSENEN	ENST00000222266.2	protein_coding	35745619,35745873,35746419,35746708	35745700,35745991,35746523,35747004	Gene ID= ENSG00000205155.7 TPM= 3.5 Transcript Type= protein_coding
chr19	35748361	35754519	35748361	35754519	+	ENST00000301159.13@LIN37	ENST00000301159.13	protein_coding	35748361,35752176,35752434,35752804,35752914,35753087,35754017,35754246,35754393	35748758,35752251,35752484,35752833,35752999,35753253,35754157,35754319,35754519	Gene ID= ENSG00000267796.7 TPM= 9.34 Transcript Type= protein_coding
chr19	35754569	35757029	35754569	35757029	-	ENST00000004982.5@HSPB6	ENST00000004982.5	protein_coding	35756811,35755772,35754569	35757029,35755894,35755683	Gene ID= ENSG00000004776.12 TPM= 56.04 Transcript Type= protein_coding
chr19	35758194	35762563	35758194	35762563	+	ENST00000537459.5@PROSER3	ENST00000537459.5	protein_coding	35758194,35759374,35759789,35762019,35762253	35758226,35759470,35759991,35762146,35762563	Gene ID= ENSG00000167595.14 TPM= 2.34 Transcript Type= protein_coding
chr19	35868445	35879788	35868445	35879788	+	ENST00000221891.8@APLP1	ENST00000221891.8	protein_coding	35868445,35869667,35870896,35871237,35871612,35871858,35872483,35873639,35874504,35874741,35876517,35877718,35878082,35878584,35878890,35879074,35879343	35868783,35869810,35871028,35871349,35871745,35872036,35872613,35873713,35874662,35874869,35876616,35877825,35878108,35878654,35878952,35879217,35879788	Gene ID= ENSG00000105290.11 TPM= 14.01 Transcript Type= protein_coding
chr19	35902538	35904270	35902538	35904270	+	ENST00000437550.2@HCST	ENST00000437550.2	protein_coding	35902538,35903351,35903772,35904123	35902636,35903416,35903903,35904270	Gene ID= ENSG00000126264.9 TPM= 14.01 Transcript Type= protein_coding
chr19	35904403	35908275	35904403	35908275	-	ENST00000544690.6@TYROBP	ENST00000544690.6	protein_coding	35908168,35907446,35907218,35904403	35908275,35907580,35907264,35904634	Gene ID= ENSG00000011600.11 TPM= 101.58 Transcript Type= protein_coding
chr19	35995199	35996315	35995199	35996315	+	ENST00000378887.3@SDHAF1	ENST00000378887.3	protein_coding	35995199	35996315	Gene ID= ENSG00000205138.3 TPM= 45.54 Transcript Type= protein_coding
chr19	36003310	36008827	36003310	36008827	-	transcript5231.chr19.nnic@SYNE4	transcript5231.chr19.nnic	protein_coding	36008554,36007125,36006750,36006423,36005333,36003613,36003310	36008827,36007268,36006944,36006671,36005437,36003671,36003520	Gene ID= ENSG00000181392.14 TPM= 3.5 Transcript Type= NA
chr19	36003310	36008776	36003310	36008776	-	transcript5235.chr19.nic@SYNE4	transcript5235.chr19.nic	protein_coding	36008217,36007125,36006750,36005333,36003613,36003310	36008776,36007268,36006944,36006671,36003671,36003520	Gene ID= ENSG00000181392.14 TPM= 2.34 Transcript Type= NA
chr19	36003310	36008793	36003310	36008793	-	ENST00000324444.7@SYNE4	ENST00000324444.7	protein_coding	36008554,36008217,36007125,36006750,36006423,36005333,36003613,36003310	36008793,36008367,36007268,36006944,36006671,36005437,36003671,36003520	Gene ID= ENSG00000181392.14 TPM= 7.01 Transcript Type= protein_coding
chr19	36003310	36008793	36003310	36008793	-	ENST00000490730.1@SYNE4	ENST00000490730.1	protein_coding	36008554,36008217,36007125,36006750,36006602,36005333,36003613,36003310	36008793,36008367,36007268,36006944,36006671,36005437,36003671,36003520	Gene ID= ENSG00000181392.14 TPM= 4.67 Transcript Type= protein_coding
chr19	36003310	36008793	36003310	36008793	-	ENST00000465425.1@SYNE4	ENST00000465425.1	protein_coding	36008554,36008217,36007125,36006750,36005333,36003613,36003310	36008793,36008367,36007268,36006944,36006671,36003671,36003520	Gene ID= ENSG00000181392.14 TPM= 4.67 Transcript Type= retained_intron
chr19	36009122	36014252	36009122	36014252	-	transcript5240.chr19.nic@ALKBH6	transcript5240.chr19.nic	protein_coding	36014175,36013344,36013021,36011404,36010894,36010567,36009122	36014252,36013422,36013089,36011464,36011045,36010645,36009553	Gene ID= ENSG00000239382.10 TPM= 2.34 Transcript Type= NA
chr19	36009122	36014252	36009122	36014252	-	transcript5245.chr19.nic@ALKBH6	transcript5245.chr19.nic	protein_coding	36014175,36013344,36013021,36011404,36010567,36009122	36014252,36013422,36013089,36011464,36011045,36009553	Gene ID= ENSG00000239382.10 TPM= 9.14 Transcript Type= NA
chr19	36009124	36014239	36009124	36014239	-	ENST00000378875.7@ALKBH6	ENST00000378875.7	protein_coding	36014175,36013344,36013021,36011404,36010894,36010567,36009124	36014239,36013422,36013089,36011464,36011045,36010683,36009553	Gene ID= ENSG00000239382.10 TPM= 9.73 Transcript Type= protein_coding
chr19	36009122	36014212	36009122	36014212	-	ENST00000471323.1@ALKBH6	ENST00000471323.1	protein_coding	36014175,36010567,36009122	36014212,36013422,36009553	Gene ID= ENSG00000239382.10 TPM= 5.64 Transcript Type= retained_intron
chr19	36009175	36014239	36009175	36014239	-	ENST00000485128.5@ALKBH6	ENST00000485128.5	protein_coding	36014175,36013514,36013344,36013021,36011404,36010894,36010567,36009175	36014239,36013588,36013422,36013089,36011464,36011045,36010645,36009553	Gene ID= ENSG00000239382.10 TPM= 1.17 Transcript Type= protein_coding
chr19	36014660	36032893	36014660	36032893	-	ENST00000360535.8@CLIP3	ENST00000360535.8	protein_coding	36032724,36032192,36027132,36026952,36026586,36026147,36024396,36019171,36018898,36017848,36017655,36017386,36016907,36014660	36032893,36032415,36027271,36027045,36026747,36026265,36024632,36019306,36019026,36017991,36017778,36017450,36016979,36016212	Gene ID= ENSG00000105270.14 TPM= 5.84 Transcript Type= protein_coding
chr19	36034985	36054762	36034985	36054762	-	ENST00000292894.1@THAP8	ENST00000292894.1	protein_coding	36054135,36039944,36039323,36034985	36054762,36040136,36039718,36035592	Gene ID= ENSG00000161277.10 TPM= 9.34 Transcript Type= protein_coding
chr19	36034985	36054398	36034985	36054398	-	transcript5256.chr19.nic@THAP8	transcript5256.chr19.nic	protein_coding	36054349,36039944,36039323,36034985	36054398,36040136,36039718,36035592	Gene ID= ENSG00000161277.10 TPM= 4.67 Transcript Type= NA
chr19	36113710	36115346	36113710	36115346	-	ENST00000221859.8@POLR2I	ENST00000221859.8	protein_coding	36114798,36114659,36114339,36114177,36114015,36113710	36115346,36114713,36114412,36114251,36114066,36113817	Gene ID= ENSG00000105258.8 TPM= 24.52 Transcript Type= protein_coding
chr19	36113716	36114906	36113716	36114906	-	ENST00000592962.5@POLR2I	ENST00000592962.5	protein_coding	36114798,36114659,36114339,36114151,36114015,36113716	36114906,36114713,36114412,36114251,36114066,36113817	Gene ID= ENSG00000105258.8 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr19	36114959	36125945	36114959	36125945	+	transcript5273.chr19.nic@TBCB	transcript5273.chr19.nic	protein_coding	36114959,36116041,36120710,36121527,36125451,36125668	36115674,36116184,36120806,36122173,36125523,36125945	Gene ID= ENSG00000105254.11 TPM= 10.31 Transcript Type= NA
chr19	36115771	36125945	36115771	36125945	+	transcript5280.chr19.nic@TBCB	transcript5280.chr19.nic	protein_coding	36115771,36120710,36121527,36125451,36125668	36116184,36120806,36122173,36125523,36125945	Gene ID= ENSG00000105254.11 TPM= 4.47 Transcript Type= NA
chr19	36114986	36125945	36114986	36125945	+	ENST00000221855.7@TBCB	ENST00000221855.7	protein_coding	36114986,36116041,36120710,36121527,36125451,36125668	36115674,36116184,36120806,36121718,36125523,36125945	Gene ID= ENSG00000105254.11 TPM= 92.63 Transcript Type= protein_coding
chr19	36139575	36150352	36139575	36150352	+	ENST00000246533.7@CAPNS1	ENST00000246533.7	protein_coding	36139575,36140997,36142300,36142652,36142909,36143064,36145806,36145976,36146196,36149578,36149813	36140157,36141220,36142333,36142741,36142966,36143128,36145874,36146054,36146312,36149636,36150352	Gene ID= ENSG00000126247.10 TPM= 283.92 Transcript Type= protein_coding
chr19	36141039	36150353	36141039	36150353	+	transcript5267.chr19.nnic@CAPNS1	transcript5267.chr19.nnic	protein_coding	36141039,36141148,36142300,36142652,36142909,36143064,36145806,36145976,36146196,36149578,36149813	36141051,36141220,36142333,36142741,36142966,36143128,36145874,36146054,36146312,36149636,36150353	Gene ID= ENSG00000126247.10 TPM= 32.89 Transcript Type= NA
chr19	36140127	36150352	36140127	36150352	+	ENST00000588815.5@CAPNS1	ENST00000588815.5	protein_coding	36140127,36141000,36142300,36142652,36142909,36143064,36145806,36145976,36146196,36149578,36149813	36140265,36141220,36142333,36142741,36142966,36143128,36145874,36146054,36146312,36149636,36150352	Gene ID= ENSG00000126247.10 TPM= 68.5 Transcript Type= protein_coding
chr19	36150922	36152869	36150922	36152869	-	ENST00000292907.7@COX7A1	ENST00000292907.7	protein_coding	36152393,36151669,36151462,36150922	36152869,36151755,36151546,36151034	Gene ID= ENSG00000161281.10 TPM= 58.38 Transcript Type= protein_coding
chr19	36150922	36152449	36150922	36152449	-	ENST00000481297.1@COX7A1	ENST00000481297.1	protein_coding	36152393,36151462,36150922	36152449,36151755,36151034	Gene ID= ENSG00000161281.10 TPM= 16.35 Transcript Type= retained_intron
chr19	36215106	36238771	36215106	36238771	+	transcript5282.chr19.nnic@ZNF146	transcript5282.chr19.nnic	protein_coding	36215106,36218122,36225954,36228748,36235659	36215155,36218195,36226073,36228819,36238771	Gene ID= ENSG00000167635.11 TPM= 2.84 Transcript Type= NA
chr19	36215099	36238771	36215099	36238771	+	transcript5283.chr19.nnic@ZNF146	transcript5283.chr19.nnic	protein_coding	36215099,36218122,36225954,36228748,36235659	36215196,36218195,36226073,36228819,36238771	Gene ID= ENSG00000167635.11 TPM= 6.34 Transcript Type= NA
chr19	36214736	36238771	36214736	36238771	+	transcript5291.chr19.nnic@ZNF146	transcript5291.chr19.nnic	protein_coding	36214736,36218122,36228748,36235659	36215155,36218195,36228819,36238771	Gene ID= ENSG00000167635.11 TPM= 2.84 Transcript Type= NA
chr19	36215106	36238771	36215106	36238771	+	transcript5294.chr19.nnic@ZNF146	transcript5294.chr19.nnic	protein_coding	36215106,36225954,36228748,36235659	36215196,36226073,36228819,36238771	Gene ID= ENSG00000167635.11 TPM= 4 Transcript Type= NA
chr19	36215099	36238765	36215099	36238765	+	transcript5300.chr19.nnic@ZNF146	transcript5300.chr19.nnic	protein_coding	36215099,36218122,36235659	36215196,36218195,36238765	Gene ID= ENSG00000167635.11 TPM= 2.84 Transcript Type= NA
chr19	36214602	36238771	36214602	36238771	+	ENST00000456324.5@ZNF146	ENST00000456324.5	protein_coding	36214602,36228748,36235659	36215196,36228819,36238771	Gene ID= ENSG00000167635.11 TPM= 8.68 Transcript Type= protein_coding
chr19	36215133	36238774	36215133	36238774	+	ENST00000443387.2@ZNF146	ENST00000443387.2	protein_coding	36215133,36218122,36228748,36235659	36215196,36218195,36228819,36238774	Gene ID= ENSG00000167635.11 TPM= 27.36 Transcript Type= protein_coding
chr19	36271598	36312660	36271598	36312660	+	transcript5305.chr19.nnic@AC012617.1	transcript5305.chr19.nnic	lincRNA	36271598,36311623,36312522	36271889,36311792,36312660	Gene ID= ENSG00000267053.6 TPM= 3.5 Transcript Type= NA
chr19	36334453	36379199	36334453	36379199	-	ENST00000270001.11@ZFP14	ENST00000270001.11	protein_coding	36379163,36367884,36362112,36360435,36334453	36379199,36367971,36362238,36360533,36341590	Gene ID= ENSG00000142065.13 TPM= 2.34 Transcript Type= protein_coding
chr19	36391960	36418664	36391960	36418664	-	transcript5313.chr19.nnic@ZFP82	transcript5313.chr19.nnic	protein_coding	36418492,36409781,36407887,36405580,36391960	36418664,36409867,36408013,36405651,36394110	Gene ID= ENSG00000181007.8 TPM= 2.34 Transcript Type= NA
chr19	36391960	36418656	36391960	36418656	-	ENST00000392161.3@ZFP82	ENST00000392161.3	protein_coding	36418492,36409781,36407887,36405580,36391960	36418656,36409867,36408013,36405672,36394110	Gene ID= ENSG00000181007.8 TPM= 8.17 Transcript Type= protein_coding
chr19	36510695	36528660	36510695	36528660	-	ENST00000523638.5@ZNF260	ENST00000523638.5	protein_coding	36528219,36525155,36510695	36528660,36525373,36515699	Gene ID= ENSG00000254004.6 TPM= 11.68 Transcript Type= protein_coding
chr19	36544386	36573252	36544386	36573252	-	ENST00000591340.5@ZNF529	ENST00000591340.5	protein_coding	36573140,36572333,36556104,36554670,36544386	36573252,36572392,36556197,36554796,36548322	Gene ID= ENSG00000186020.12 TPM= 3.5 Transcript Type= protein_coding
chr19	36637989	36666837	36637989	36666837	-	ENST00000588268.5@ZNF461	ENST00000588268.5	protein_coding	36666690,36664698,36658299,36656448,36643794,36637989	36666837,36664786,36658425,36656543,36643862,36640043	Gene ID= ENSG00000197808.11 TPM= 1.17 Transcript Type= protein_coding
chr19	36687596	36721326	36687596	36721326	+	transcript5343.chr19.nnic@ZNF567	transcript5343.chr19.nnic	protein_coding	36687596,36689397,36694802,36712386,36712781,36718948	36687634,36689497,36694876,36712512,36712867,36721326	Gene ID= ENSG00000189042.13 TPM= 2.34 Transcript Type= NA
chr19	36689400	36721326	36689400	36721326	+	ENST00000360729.8@ZNF567	ENST00000360729.8	protein_coding	36689400,36712386,36712781,36718948	36689497,36712512,36712867,36721326	Gene ID= ENSG00000189042.13 TPM= 2.34 Transcript Type= protein_coding
chr19	36817428	36838384	36817428	36838384	-	ENST00000356725.8@ZNF790	ENST00000356725.8	protein_coding	36838337,36825611,36823667,36823285,36817428	36838384,36825692,36823790,36823380,36820114	Gene ID= ENSG00000197863.8 TPM= 2.34 Transcript Type= protein_coding
chr19	36850876	36879574	36850876	36879574	+	ENST00000614069.4@ZNF345	ENST00000614069.4	protein_coding	36850876,36851830,36854450,36876785	36850968,36851904,36854594,36879574	Gene ID= ENSG00000251247.10 TPM= 1.17 Transcript Type= protein_coding
chr19	37078480	37130311	37078480	37130311	+	ENST00000337995.3@ZNF420	ENST00000337995.3	protein_coding	37078480,37080345,37089039,37090995,37127128	37078570,37080388,37089127,37091121,37130311	Gene ID= ENSG00000197050.10 TPM= 10.51 Transcript Type= protein_coding
chr19	37145540	37172741	37145540	37172741	-	ENST00000292841.9@ZNF585A	ENST00000292841.9	protein_coding	37172627,37169839,37156229,37155865,37145540	37172741,37170054,37156355,37155957,37153606	Gene ID= ENSG00000196967.10 TPM= 3.5 Transcript Type= protein_coding
chr19	37165385	37172694	37165385	37172694	-	ENST00000588354.1@ZNF585A	ENST00000588354.1	protein_coding	37172627,37169839,37165385	37172694,37170054,37165696	Gene ID= ENSG00000196967.10 TPM= 5.84 Transcript Type= protein_coding
chr19	37181579	37210549	37181579	37210549	-	ENST00000532828.6@ZNF585B	ENST00000532828.6	protein_coding	37210441,37207040,37190024,37189661,37181579	37210549,37207254,37190150,37189753,37187244	Gene ID= ENSG00000245680.9 TPM= 2.34 Transcript Type= protein_coding
chr19	37217926	37243921	37217926	37243921	+	transcript5386.chr19.nic@ZNF383	transcript5386.chr19.nic	protein_coding	37217926,37224818,37230409,37235549,37235979,37242469	37218274,37224939,37230462,37235675,37236074,37243921	Gene ID= ENSG00000188283.11 TPM= 4.67 Transcript Type= NA
chr19	37317887	37364447	37317887	37364447	+	transcript5392.chr19.nnic@HKR1	transcript5392.chr19.nnic	protein_coding	37317887,37322185,37323533,37324208,37324796,37347190,37347777,37362109	37318186,37322232,37323570,37324265,37325274,37347316,37347872,37364447	Gene ID= ENSG00000181666.17 TPM= 3.3 Transcript Type= NA
chr19	37317887	37364447	37317887	37364447	+	transcript5394.chr19.nic@HKR1	transcript5394.chr19.nic	protein_coding	37317887,37322185,37323533,37324208,37347190,37347777,37362109	37318186,37322232,37323570,37324265,37347316,37347872,37364447	Gene ID= ENSG00000181666.17 TPM= 7.97 Transcript Type= NA
chr19	37334666	37364451	37334666	37364451	+	ENST00000392153.7@HKR1	ENST00000392153.7	protein_coding	37334666,37335169,37347190,37347777,37362109	37334782,37335257,37347316,37347872,37364451	Gene ID= ENSG00000181666.17 TPM= 5.06 Transcript Type= protein_coding
chr19	37324796	37326371	37324796	37326371	-	transcript5408.chr19.nnic@NA	transcript5408.chr19.nnic	NA	37324796	37326371	Gene ID= novel_gene_chr19_5409 TPM= 2.34 Transcript Type= NA
chr19	37339546	37342950	37339546	37342950	-	transcript5410.chr19.nnic@NA	transcript5410.chr19.nnic	NA	37339546	37342950	Gene ID= novel_gene_chr19_5411 TPM= 11.68 Transcript Type= NA
chr19	37371161	37390770	37371161	37390770	+	ENST00000436120.6@ZNF527	ENST00000436120.6	protein_coding	37371161,37374158,37379120,37380277,37388306	37371226,37374231,37379246,37380372,37390770	Gene ID= ENSG00000189164.14 TPM= 4.67 Transcript Type= protein_coding
chr19	37411155	37467437	37411155	37467437	-	ENST00000316950.10@ZNF569	ENST00000316950.10	protein_coding	37467084,37465313,37444907,37426252,37425868,37411155	37467437,37465473,37444964,37426378,37425963,37414419	Gene ID= ENSG00000196437.10 TPM= 3.5 Transcript Type= protein_coding
chr19	37564264	37594772	37564264	37594772	-	ENST00000451802.6@ZNF571	ENST00000451802.6	protein_coding	37594741,37586668,37583971,37564264	37594772,37586745,37584097,37566291	Gene ID= ENSG00000180479.13 TPM= 4.67 Transcript Type= protein_coding
chr19	37594886	37614097	37594886	37614097	+	ENST00000316433.8@ZNF540	ENST00000316433.8	protein_coding	37594886,37598376,37599626,37601010,37611513	37595095,37598456,37599752,37601105,37614097	Gene ID= ENSG00000171817.16 TPM= 2.34 Transcript Type= protein_coding
chr19	37667751	37692322	37667751	37692322	-	ENST00000358582.8@ZNF781	ENST00000358582.8	protein_coding	37692152,37691521,37686451,37667751	37692322,37691618,37686522,37670556	Gene ID= ENSG00000196381.10 TPM= 1.17 Transcript Type= protein_coding
chr19	37696363	37719790	37696363	37719790	-	ENST00000355202.8@ZNF607	ENST00000355202.8	protein_coding	37719269,37711610,37709696,37707914,37696363	37719790,37711692,37709822,37708012,37699895	Gene ID= ENSG00000198182.12 TPM= 9.34 Transcript Type= protein_coding
chr19	37696368	37719757	37696368	37719757	-	transcript5449.chr19.nnic@ZNF607	transcript5449.chr19.nnic	protein_coding	37719269,37696368	37719757,37699895	Gene ID= ENSG00000198182.12 TPM= 2.34 Transcript Type= NA
chr19	37738302	37779585	37738302	37779585	-	ENST00000586155.5@ZNF573	ENST00000586155.5	protein_coding	37779544,37773661,37771564,37770407,37770005,37738302	37779585,37773751,37771696,37770597,37770097,37740194	Gene ID= ENSG00000189144.13 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr19	37738302	37779590	37738302	37779590	-	ENST00000536220.5@ZNF573	ENST00000536220.5	protein_coding	37779544,37773661,37771564,37770005,37738302	37779590,37773751,37771696,37770097,37740194	Gene ID= ENSG00000189144.13 TPM= 1.17 Transcript Type= protein_coding
chr19	37907228	38208372	37907228	38208372	+	ENST00000222345.10@SIPA1L3	ENST00000222345.10	protein_coding	37907228,38029089,38081256,38088721,38099962,38101052,38106537,38110227,38119306,38130498,38141184,38142573,38152840,38162253,38164479,38182519,38192145,38193537,38198389,38201862,38204127,38206097	37907358,38029156,38083099,38088851,38100150,38101226,38106640,38110384,38119882,38130772,38141435,38142710,38152967,38162371,38164906,38182740,38192310,38193780,38198532,38201997,38204208,38208372	Gene ID= ENSG00000105738.10 TPM= 74.73 Transcript Type= protein_coding
chr19	38029858	38033193	38029858	38033193	-	transcript5460.chr19.nnic@NA	transcript5460.chr19.nnic	NA	38029858	38033193	Gene ID= novel_gene_chr19_5461 TPM= 4.67 Transcript Type= NA
chr19	38036827	38038604	38036827	38038604	+	transcript5458.chr19.nnic@NA	transcript5458.chr19.nnic	NA	38036827	38038604	Gene ID= novel_gene_chr19_5459 TPM= 2.34 Transcript Type= NA
chr19	38264576	38292451	38264576	38292451	+	ENST00000587090.5@SPINT2	ENST00000587090.5	protein_coding	38264576,38283627,38287876,38289138,38290119,38290537,38291840	38264723,38283797,38287935,38289191,38290280,38290575,38292451	Gene ID= ENSG00000167642.12 TPM= 24.13 Transcript Type= protein_coding
chr19	38264576	38292468	38264576	38292468	+	ENST00000454580.7@SPINT2	ENST00000454580.7	protein_coding	38264576,38287876,38289138,38290119,38290537,38291840	38264998,38287935,38289191,38290280,38290575,38292468	Gene ID= ENSG00000167642.12 TPM= 22.38 Transcript Type= protein_coding
chr19	38251237	38256591	38251237	38256591	-	ENST00000301242.8@PPP1R14A	ENST00000301242.8	protein_coding	38256139,38252894,38252306,38251237	38256591,38252974,38252338,38251446	Gene ID= ENSG00000167641.10 TPM= 136.02 Transcript Type= protein_coding
chr19	38251237	38253257	38251237	38253257	-	ENST00000587515.5@PPP1R14A	ENST00000587515.5	protein_coding	38252894,38252306,38251237	38253257,38252338,38251446	Gene ID= ENSG00000167641.10 TPM= 8.76 Transcript Type= protein_coding
chr19	38303561	38305020	38303561	38305020	-	transcript5502.chr19.nnic@NA	transcript5502.chr19.nnic	NA	38303561	38305020	Gene ID= novel_gene_chr19_5503 TPM= 5.84 Transcript Type= NA
chr19	38304164	38305006	38304164	38305006	+	ENST00000588605.5@C19orf33	ENST00000588605.5	protein_coding	38304164,38304375,38304565,38304845	38304283,38304490,38304686,38305006	Gene ID= ENSG00000167644.11 TPM= 9.92 Transcript Type= protein_coding
chr19	38304161	38305009	38304161	38305009	+	ENST00000301246.9@C19orf33	ENST00000301246.9	protein_coding	38304161,38304375,38304624,38304845	38304283,38304490,38304686,38305009	Gene ID= ENSG00000167644.11 TPM= 40.28 Transcript Type= protein_coding
chr19	38305114	38315923	38305114	38315923	-	ENST00000337679.12@YIF1B	ENST00000337679.12	protein_coding	38315869,38309405,38309224,38308979,38308792,38307597,38307428,38306914,38305114	38315923,38309643,38309328,38309057,38308849,38307752,38307521,38306990,38305507	Gene ID= ENSG00000167645.16 TPM= 10.51 Transcript Type= protein_coding
chr19	38305118	38315963	38305118	38315963	-	ENST00000339413.10@YIF1B	ENST00000339413.10	protein_coding	38315860,38309405,38309224,38308979,38308792,38307597,38307428,38305118	38315963,38309643,38309328,38309057,38308849,38307752,38307521,38305507	Gene ID= ENSG00000167645.16 TPM= 23.35 Transcript Type= protein_coding
chr19	38306697	38315920	38306697	38315920	-	ENST00000591755.5@YIF1B	ENST00000591755.5	protein_coding	38315869,38309405,38309224,38308979,38308792,38307597,38307428,38306697	38315920,38309643,38309328,38309057,38308849,38307752,38307521,38306990	Gene ID= ENSG00000167645.16 TPM= 1.17 Transcript Type= protein_coding
chr19	38319814	38333548	38319814	38333548	+	transcript5494.chr19.nnic@KCNK6	transcript5494.chr19.nnic	protein_coding	38319814,38326593,38327180,38333400	38320272,38326988,38327399,38333548	Gene ID= ENSG00000099337.4 TPM= 2.34 Transcript Type= NA
chr19	38319844	38332076	38319844	38332076	+	ENST00000263372.4@KCNK6	ENST00000263372.4	protein_coding	38319844,38326593,38327180	38320272,38326988,38332076	Gene ID= ENSG00000099337.4 TPM= 5.84 Transcript Type= protein_coding
chr19	38403115	38409084	38403115	38409084	+	transcript5508.chr19.nnic@FAM98C	transcript5508.chr19.nnic	protein_coding	38403115,38403338,38403560,38404908,38405375,38405519,38406910,38408751	38403218,38403486,38403694,38405113,38405421,38405635,38407077,38409084	Gene ID= ENSG00000130244.12 TPM= 6.62 Transcript Type= NA
chr19	38403173	38409084	38403173	38409084	+	transcript5513.chr19.nic@FAM98C	transcript5513.chr19.nic	protein_coding	38403173,38403560,38404908,38405344,38405519,38406910,38408751	38403486,38403694,38405113,38405421,38405635,38407077,38409084	Gene ID= ENSG00000130244.12 TPM= 6.62 Transcript Type= NA
chr19	38403135	38409084	38403135	38409084	+	ENST00000252530.9@FAM98C	ENST00000252530.9	protein_coding	38403135,38403338,38403560,38404908,38405344,38405519,38406910,38408751	38403218,38403486,38403694,38405113,38405421,38405635,38407077,38409084	Gene ID= ENSG00000130244.12 TPM= 20.63 Transcript Type= protein_coding
chr19	38409058	38426305	38409058	38426305	-	ENST00000587753.5@RASGRP4	ENST00000587753.5	protein_coding	38426069,38421969,38421095,38420908,38420131,38419860,38418391,38417052,38414848,38413394,38413193,38412931,38412672,38411345,38411115,38410886,38409058	38426305,38422153,38421200,38420970,38420262,38420013,38418564,38417168,38414916,38413474,38413297,38413049,38412816,38411381,38411249,38410998,38410096	Gene ID= ENSG00000171777.15 TPM= 4.09 Transcript Type= protein_coding
chr19	38409059	38426305	38409059	38426305	-	ENST00000615439.4@RASGRP4	ENST00000615439.4	protein_coding	38426069,38421969,38421095,38420908,38420131,38419860,38418391,38417052,38414848,38413394,38413193,38412931,38412672,38411345,38411115,38410886,38409059	38426305,38422153,38421200,38420970,38420262,38420013,38418564,38417168,38415123,38413474,38413297,38413049,38412816,38411381,38411249,38410998,38410096	Gene ID= ENSG00000171777.15 TPM= 8.76 Transcript Type= protein_coding
chr19	38433699	38587564	38433699	38587564	+	ENST00000355481.8@RYR1	ENST00000355481.8	protein_coding	38433699,38440745,38442349,38443558,38443718,38444149,38444584,38446472,38446694,38448355,38448649,38451764,38452819,38455235,38455451,38455633,38457497,38458051,38459146,38460375,38463423,38463747,38464639,38466091,38467610,38468966,38469305,38473377,38475318,38477710,38478435,38483027,38483290,38485590,38489177,38490076,38490621,38492490,38494352,38496215,38496409,38496860,38499108,38499635,38499908,38500606,38500821,38502507,38502880,38504220,38504748,38505003,38505309,38505806,38506303,38506471,38506829,38507712,38510498,38510660,38511561,38512072,38512245,38515026,38516087,38517359,38519214,38523028,38523217,38525332,38526993,38527647,38528306,38528599,38528951,38532490,38532671,38534720,38535141,38535316,38535997,38536750,38537880,38543347,38543532,38543771,38546445,38548233,38561113,38564959,38566911,38567773,38570607,38572019,38573177,38575919,38577918,38578144,38579982,38580370,38584943,38585938,38586091,38586525,38587325	38433874,38440864,38442453,38443632,38443796,38444261,38444677,38446565,38446768,38448511,38448813,38451885,38453014,38455370,38455546,38455751,38457630,38458292,38459338,38460591,38463527,38463850,38464722,38466398,38467812,38469140,38469513,38473771,38475450,38477870,38478600,38483113,38483516,38486202,38489443,38490276,38490732,38492636,38494625,38496329,38496541,38496954,38499243,38499821,38500016,38500726,38500990,38502727,38502970,38504360,38504911,38505081,38505398,38505946,38506377,38506546,38506952,38507827,38510565,38510781,38511610,38512132,38512483,38515107,38516217,38517691,38519454,38523115,38523309,38525502,38527052,38527784,38528418,38528695,38529057,38532541,38532736,38534819,38535220,38535392,38536070,38536767,38537960,38543435,38543660,38543875,38546526,38548420,38561454,38565771,38566987,38567917,38570693,38572270,38573307,38575961,38578048,38578204,38580128,38580504,38585099,38586002,38586191,38586576,38587564	Gene ID= ENSG00000196218.12 TPM= 21.02 Transcript Type= protein_coding
chr19	38587669	38618003	38587669	38618003	-	ENST00000396857.6@MAP4K1	ENST00000396857.6	protein_coding	38617797,38617568,38617354,38616195,38614390,38614245,38614043,38613880,38612611,38611243,38611051,38609909,38609596,38608112,38607990,38607864,38606173,38605568,38605409,38601441,38600077,38599925,38597486,38597326,38597034,38596312,38595939,38595640,38595485,38593282,38587669	38618003,38617625,38617444,38616259,38614445,38614292,38614085,38613952,38612742,38611305,38611132,38610025,38609674,38608170,38608033,38607911,38606215,38605730,38605491,38601525,38600153,38599985,38597594,38597384,38597137,38596486,38596001,38595729,38595555,38593337,38587817	Gene ID= ENSG00000104814.12 TPM= 8.17 Transcript Type= protein_coding
chr19	38619097	38636955	38619097	38636955	+	ENST00000248342.8@EIF3K	ENST00000248342.8	protein_coding	38619097,38620337,38624077,38626028,38632430,38632601,38634993,38636889	38619327,38620435,38624197,38626102,38632496,38632678,38635118,38636955	Gene ID= ENSG00000178982.9 TPM= 142.45 Transcript Type= protein_coding
chr19	38619196	38636953	38619196	38636953	+	transcript5536.chr19.nnic@EIF3K	transcript5536.chr19.nnic	protein_coding	38619196,38620337,38624077,38626028,38634993	38619327,38620435,38624197,38626102,38636953	Gene ID= ENSG00000178982.9 TPM= 2.34 Transcript Type= NA
chr19	38627907	38630917	38627907	38630917	-	transcript5541.chr19.nnic@NA	transcript5541.chr19.nnic	NA	38627907	38630917	Gene ID= novel_gene_chr19_5542 TPM= 2.34 Transcript Type= NA
chr19	38630781	38632393	38630781	38632393	+	transcript5539.chr19.nnic@NA	transcript5539.chr19.nnic	NA	38630781	38632393	Gene ID= novel_gene_chr19_5540 TPM= 2.34 Transcript Type= NA
chr19	38659067	38665990	38659067	38665990	-	transcript5564.chr19.nnic@NA	transcript5564.chr19.nnic	NA	38659067	38665990	Gene ID= novel_gene_chr19_5565 TPM= 8.17 Transcript Type= NA
chr19	38729550	38730194	38729550	38730194	+	transcript5562.chr19.nnic@NA	transcript5562.chr19.nnic	NA	38729550	38730194	Gene ID= novel_gene_chr19_5563 TPM= 3.5 Transcript Type= NA
chr19	38730187	38736428	38730187	38736428	-	transcript5559.chr19.nic@CAPN12	transcript5559.chr19.nic	protein_coding	38736110,38735502,38735370,38734813,38734319,38734142,38733703,38731107,38730965,38730187	38736428,38735544,38735429,38734870,38734389,38734204,38733781,38731223,38731023,38730878	Gene ID= ENSG00000182472.8 TPM= 22.18 Transcript Type= NA
chr19	38770971	38773492	38770971	38773492	-	ENST00000378626.4@LGALS7	ENST00000378626.4	protein_coding	38773487,38773015,38771829,38770971	38773492,38773103,38772030,38771139	Gene ID= ENSG00000205076.4 TPM= 1.17 Transcript Type= protein_coding
chr19	38815422	38832005	38815422	38832005	-	ENST00000221418.8@ECH1	ENST00000221418.8	protein_coding	38831721,38831309,38831078,38817451,38817316,38817065,38816453,38816284,38815857,38815422	38832005,38831516,38831166,38817575,38817364,38817129,38816523,38816355,38816007,38815717	Gene ID= ENSG00000104823.8 TPM= 333.35 Transcript Type= protein_coding
chr19	38836395	38850000	38836395	38850000	-	transcript5581.chr19.nic@HNRNPL	transcript5581.chr19.nic	protein_coding	38849700,38847316,38845853,38845650,38844008,38843842,38841613,38840488,38840096,38838894,38838397,38837594,38837384,38836395	38850000,38847434,38846090,38845735,38844104,38843914,38841682,38840559,38840376,38839015,38838598,38837651,38837479,38836780	Gene ID= ENSG00000104824.16 TPM= 18.39 Transcript Type= NA
chr19	38836388	38850333	38836388	38850333	-	ENST00000221419.9@HNRNPL	ENST00000221419.9	protein_coding	38849700,38847316,38845853,38845650,38844008,38843842,38840488,38840096,38838894,38838397,38837594,38837384,38836388	38850333,38847434,38846090,38845735,38844104,38843914,38840559,38840376,38839015,38838598,38837651,38837479,38836780	Gene ID= ENSG00000104824.16 TPM= 249.48 Transcript Type= protein_coding
chr19	38836395	38850000	38836395	38850000	-	transcript5588.chr19.nic@HNRNPL	transcript5588.chr19.nic	protein_coding	38849700,38847316,38845853,38845650,38844008,38843842,38840096,38838894,38838397,38837594,38837384,38836395	38850000,38847434,38846090,38845735,38844104,38843914,38840559,38839015,38838598,38837651,38837479,38836780	Gene ID= ENSG00000104824.16 TPM= 20.92 Transcript Type= NA
chr19	38842106	38850000	38842106	38850000	-	transcript5597.chr19.nic@HNRNPL	transcript5597.chr19.nic	protein_coding	38849700,38847316,38845853,38845650,38844008,38842106	38850000,38847434,38846090,38845735,38844104,38843914	Gene ID= ENSG00000104824.16 TPM= 38.53 Transcript Type= NA
chr19	38878557	38899823	38878557	38899823	-	ENST00000249396.11@SIRT2	ENST00000249396.11	protein_coding	38899506,38898379,38893819,38893414,38890103,38889855,38889689,38889087,38883627,38881432,38881100,38880821,38880685,38879632,38879434,38878557	38899823,38898425,38893867,38893527,38890144,38889961,38889745,38889155,38883756,38881491,38881155,38880897,38880736,38879702,38879500,38879310	Gene ID= ENSG00000068903.19 TPM= 28.49 Transcript Type= protein_coding
chr19	38878557	38899862	38878557	38899862	-	ENST00000392081.6@SIRT2	ENST00000392081.6	protein_coding	38899506,38893819,38893414,38890103,38889855,38889689,38889087,38883627,38881432,38881100,38880821,38880685,38879632,38879434,38878557	38899862,38893867,38893527,38890144,38889961,38889745,38889155,38883756,38881491,38881155,38880897,38880736,38879702,38879500,38879310	Gene ID= ENSG00000068903.19 TPM= 109.05 Transcript Type= protein_coding
chr19	38878557	38899588	38878557	38899588	-	transcript5617.chr19.nic@SIRT2	transcript5617.chr19.nic	protein_coding	38899506,38893819,38893414,38890103,38889855,38889689,38889087,38883627,38881432,38881100,38880821,38880685,38879632,38879434,38878557	38899588,38893971,38893527,38890144,38889961,38889745,38889155,38883756,38881491,38881155,38880897,38880736,38879702,38879500,38879310	Gene ID= ENSG00000068903.19 TPM= 7.47 Transcript Type= NA
chr19	38878557	38899608	38878557	38899608	-	transcript5620.chr19.nnic@SIRT2	transcript5620.chr19.nnic	protein_coding	38899506,38890103,38889855,38889689,38889087,38883627,38881432,38881100,38880821,38880685,38879632,38879434,38878557	38899608,38890144,38889961,38889745,38889155,38883756,38881491,38881155,38880897,38880736,38879702,38879500,38879310	Gene ID= ENSG00000068903.19 TPM= 6.31 Transcript Type= NA
chr19	38899980	38908893	38899980	38908893	+	ENST00000509705.3@NFKBIB	ENST00000509705.3	protein_coding	38899980,38905071,38905202,38907221,38907399	38900211,38905120,38905535,38907309,38908893	Gene ID= ENSG00000104825.16 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr19	38899952	38908538	38899952	38908538	+	ENST00000572515.5@NFKBIB	ENST00000572515.5	protein_coding	38899952,38905015,38905202,38907221,38907399	38900211,38905120,38905535,38907309,38908538	Gene ID= ENSG00000104825.16 TPM= 25.69 Transcript Type= protein_coding
chr19	38899999	38908886	38899999	38908886	+	ENST00000313582.5@NFKBIB	ENST00000313582.5	protein_coding	38899999,38905015,38905202,38907221,38907399,38908731	38900211,38905120,38905535,38907309,38907659,38908886	Gene ID= ENSG00000104825.16 TPM= 7.01 Transcript Type= protein_coding
chr19	38915266	38930896	38915266	38930896	-	ENST00000221431.10@SARS2	ENST00000221431.10	protein_coding	38930470,38926205,38922238,38921527,38921392,38920086,38919762,38918766,38918422,38918094,38917921,38917724,38916221,38916037,38915841,38915266	38930896,38926300,38922267,38921667,38921446,38920149,38919867,38918813,38918530,38918139,38918008,38917833,38916314,38916129,38915906,38915749	Gene ID= ENSG00000104835.14 TPM= 15.76 Transcript Type= protein_coding
chr19	38915266	38930768	38915266	38930768	-	transcript5640.chr19.nic@SARS2	transcript5640.chr19.nic	protein_coding	38930470,38926205,38921527,38921392,38920086,38919762,38918766,38918422,38918094,38917921,38917724,38916221,38916037,38915841,38915266	38930768,38926300,38922267,38921446,38920149,38919867,38918813,38918530,38918139,38918008,38917833,38916314,38916129,38915906,38915749	Gene ID= ENSG00000104835.14 TPM= 5.25 Transcript Type= NA
chr19	38930548	38933020	38930548	38933020	+	ENST00000308018.8@MRPS12	ENST00000308018.8	protein_coding	38930548,38931276,38932333	38930998,38931343,38933020	Gene ID= ENSG00000128626.11 TPM= 19.27 Transcript Type= protein_coding
chr19	38930999	38933020	38930999	38933020	+	ENST00000402029.3@MRPS12	ENST00000402029.3	protein_coding	38930999,38931276,38932333	38931171,38931343,38933020	Gene ID= ENSG00000128626.11 TPM= 6.42 Transcript Type= protein_coding
chr19	38943575	38975739	38943575	38975739	-	transcript5657.chr19.nic@FBXO17	transcript5657.chr19.nic	protein_coding	38975586,38949971,38948567,38946472,38943575	38975739,38950336,38948678,38946567,38945104	Gene ID= ENSG00000269190.5 TPM= 3.5 Transcript Type= NA
chr19	38941401	38975910	38941401	38975910	-	ENST00000292852.8@FBXO17	ENST00000292852.8	protein_coding	38975586,38949971,38948567,38946472,38944969,38941401	38975910,38950336,38948678,38946567,38945104,38942751	Gene ID= ENSG00000269190.5 TPM= 7.01 Transcript Type= protein_coding
chr19	39024053	39032596	39024053	39032596	-	ENST00000292853.8@FBXO27	ENST00000292853.8	protein_coding	39032503,39031864,39031209,39031029,39026870,39024053	39032596,39032253,39031320,39031124,39027005,39025554	Gene ID= ENSG00000161243.8 TPM= 3.5 Transcript Type= protein_coding
chr19	39024053	39032268	39024053	39032268	-	transcript5660.chr19.nic@FBXO27	transcript5660.chr19.nic	protein_coding	39031864,39031209,39031029,39026870,39024053	39032268,39031320,39031124,39027005,39025554	Gene ID= ENSG00000161243.8 TPM= 10.51 Transcript Type= NA
chr19	39125778	39179402	39125778	39179402	+	transcript5662.chr19.nic@PAK4	transcript5662.chr19.nic	protein_coding	39125778,39168230,39169532,39172918,39173576,39174931,39175312,39176590,39177675,39178424	39125919,39168302,39169757,39173376,39174010,39175064,39175438,39176715,39177809,39179402	Gene ID= ENSG00000130669.17 TPM= 14.44 Transcript Type= NA
chr19	39136882	39179402	39136882	39179402	+	transcript5664.chr19.nnic@PAK4	transcript5664.chr19.nnic	protein_coding	39136882,39168230,39169532,39172918,39173576,39174931,39175312,39176590,39177675,39178424	39136982,39168302,39169757,39173376,39174010,39175064,39175438,39176715,39177809,39179402	Gene ID= ENSG00000130669.17 TPM= 9.77 Transcript Type= NA
chr19	39167292	39179402	39167292	39179402	+	transcript5666.chr19.nnic@PAK4	transcript5666.chr19.nnic	protein_coding	39167292,39168230,39169532,39172918,39173576,39174931,39175312,39176590,39177675,39178424	39167386,39168302,39169757,39173376,39174010,39175064,39175438,39176715,39177809,39179402	Gene ID= ENSG00000130669.17 TPM= 13.28 Transcript Type= NA
chr19	39136888	39179402	39136888	39179402	+	transcript5673.chr19.nnic@PAK4	transcript5673.chr19.nnic	protein_coding	39136888,39169532,39172918,39173576,39174931,39175312,39176590,39177675,39178424	39136982,39169757,39173376,39174010,39175064,39175438,39176715,39177809,39179402	Gene ID= ENSG00000130669.17 TPM= 6.27 Transcript Type= NA
chr19	39167292	39179402	39167292	39179402	+	transcript5675.chr19.nnic@PAK4	transcript5675.chr19.nnic	protein_coding	39167292,39168230,39169532,39173576,39174931,39175312,39176590,39177675,39178424	39167386,39168312,39169757,39174010,39175064,39175438,39176715,39177809,39179402	Gene ID= ENSG00000130669.17 TPM= 5.53 Transcript Type= NA
chr19	39170360	39179402	39170360	39179402	+	transcript5681.chr19.nic@PAK4	transcript5681.chr19.nic	protein_coding	39170360,39173576,39174931,39175312,39176590,39177675,39178424	39173376,39174010,39175064,39175438,39176715,39177809,39179402	Gene ID= ENSG00000130669.17 TPM= 24.87 Transcript Type= NA
chr19	39125802	39179402	39125802	39179402	+	ENST00000358301.7@PAK4	ENST00000358301.7	protein_coding	39125802,39169532,39172918,39173576,39174931,39175312,39176590,39177675,39178424	39125919,39169757,39173376,39174010,39175064,39175438,39176715,39177809,39179402	Gene ID= ENSG00000130669.17 TPM= 14.44 Transcript Type= protein_coding
chr19	39137985	39141600	39137985	39141600	-	transcript5686.chr19.nnic@NA	transcript5686.chr19.nnic	NA	39137985	39141600	Gene ID= novel_gene_chr19_5687 TPM= 4.67 Transcript Type= NA
chr19	39306818	39320873	39306818	39320873	-	transcript5689.chr19.nic@AC011445.1	transcript5689.chr19.nic	sense_overlapping	39320793,39318326,39316082,39313931,39306818	39320873,39318358,39316136,39315373,39308542	Gene ID= ENSG00000268262.1 TPM= 5.84 Transcript Type= NA
chr19	39328357	39336185	39328357	39336185	-	ENST00000597595.5@GMFG	ENST00000597595.5	protein_coding	39335974,39335435,39335261,39333077,39329544,39329000,39328357	39336185,39335531,39335310,39333126,39329626,39329073,39328548	Gene ID= ENSG00000130755.12 TPM= 33.08 Transcript Type= protein_coding
chr19	39328359	39336005	39328359	39336005	-	ENST00000595207.5@GMFG	ENST00000595207.5	protein_coding	39335974,39335435,39333077,39329544,39329000,39328359	39336005,39335531,39333126,39329626,39329073,39328548	Gene ID= ENSG00000130755.12 TPM= 2.14 Transcript Type= nonsense_mediated_decay
chr19	39328359	39336006	39328359	39336006	-	ENST00000598034.5@GMFG	ENST00000598034.5	protein_coding	39335974,39335435,39335261,39333077,39329544,39328359	39336006,39335531,39335310,39333126,39329626,39329073	Gene ID= ENSG00000130755.12 TPM= 2.34 Transcript Type= protein_coding
chr19	39328353	39336017	39328353	39336017	-	ENST00000601387.5@GMFG	ENST00000601387.5	protein_coding	39335974,39335261,39333077,39329544,39329000,39328353	39336017,39335310,39333126,39329626,39329073,39328548	Gene ID= ENSG00000130755.12 TPM= 2.14 Transcript Type= protein_coding
chr19	39341773	39341945	39341773	39341945	-	ENST00000599274.1@AC011445.2	ENST00000599274.1	lincRNA	39341773	39341945	Gene ID= ENSG00000269246.1 TPM= 2.34 Transcript Type= lincRNA
chr19	39342424	39385696	39342424	39385696	+	transcript5702.chr19.nic@SAMD4B	transcript5702.chr19.nic	protein_coding	39342424,39354006,39356689,39369655,39375650,39376437,39376705,39377485,39378504,39379966,39380587,39380990,39383208,39383499	39342576,39354066,39357089,39370125,39375889,39376546,39376791,39377824,39378589,39380084,39380785,39381113,39383291,39385696	Gene ID= ENSG00000179134.15 TPM= 22.32 Transcript Type= NA
chr19	39342424	39385697	39342424	39385697	+	transcript5710.chr19.nic@SAMD4B	transcript5710.chr19.nic	protein_coding	39342424,39354006,39356689,39369655,39375650,39376437,39376705,39377485,39378504,39379966,39380587,39380990,39383208	39342576,39354066,39357089,39370125,39375889,39376546,39376791,39377824,39378589,39380084,39380785,39381113,39385697	Gene ID= ENSG00000179134.15 TPM= 11.58 Transcript Type= NA
chr19	39342442	39384188	39342442	39384188	+	ENST00000598913.5@SAMD4B	ENST00000598913.5	protein_coding	39342442,39356689,39369655,39375650,39376437,39376705,39377485,39378504,39379966,39380587,39380990,39383208,39383708	39342576,39357089,39370125,39375889,39376546,39376791,39377824,39378589,39380084,39380785,39381113,39383291,39384188	Gene ID= ENSG00000179134.15 TPM= 3.71 Transcript Type= protein_coding
chr19	39368163	39373788	39368163	39373788	-	transcript5736.chr19.nnic@NA	transcript5736.chr19.nnic	NA	39368163	39373788	Gene ID= novel_gene_chr19_5737 TPM= 7.01 Transcript Type= NA
chr19	39391396	39399559	39391396	39399559	+	ENST00000599213.6@MED29	ENST00000599213.6	protein_coding	39391396,39392464,39393553,39397457	39391638,39392522,39393637,39399559	Gene ID= ENSG00000063322.13 TPM= 10.51 Transcript Type= protein_coding
chr19	39394862	39398134	39394862	39398134	-	transcript5734.chr19.nnic@NA	transcript5734.chr19.nnic	NA	39394862	39398134	Gene ID= novel_gene_chr19_5735 TPM= 3.5 Transcript Type= NA
chr19	39405041	39406618	39405041	39406618	-	transcript5738.chr19.nnic@NA	transcript5738.chr19.nnic	NA	39405041	39406618	Gene ID= novel_gene_chr19_5739 TPM= 2.34 Transcript Type= NA
chr19	39406813	39409412	39406813	39409412	+	ENST00000597629.1@ZFP36	ENST00000597629.1	protein_coding	39406813,39407743	39406928,39409412	Gene ID= ENSG00000128016.5 TPM= 578.74 Transcript Type= protein_coding
chr19	39406858	39409368	39406858	39409368	+	ENST00000594442.1@ZFP36	ENST00000594442.1	protein_coding	39406858,39407745	39406932,39409368	Gene ID= ENSG00000128016.5 TPM= 29.97 Transcript Type= protein_coding
chr19	39433207	39435948	39433207	39435948	-	ENST00000251453.7@RPS16	ENST00000251453.7	protein_coding	39435848,39435607,39433665,39433522,39433207	39435948,39435708,39433761,39433569,39433418	Gene ID= ENSG00000105193.8 TPM= 586.72 Transcript Type= protein_coding
chr19	39433217	39435941	39433217	39435941	-	ENST00000601655.5@RPS16	ENST00000601655.5	protein_coding	39435848,39435658,39433665,39433522,39433217	39435941,39435708,39433761,39433569,39433418	Gene ID= ENSG00000105193.8 TPM= 14.59 Transcript Type= protein_coding
chr19	39433223	39435948	39433223	39435948	-	ENST00000601390.1@RPS16	ENST00000601390.1	protein_coding	39435848,39433665,39433522,39433223	39435948,39435708,39433569,39433418	Gene ID= ENSG00000105193.8 TPM= 2.34 Transcript Type= retained_intron
chr19	39441643	39476670	39441643	39476670	+	ENST00000599117.5@SUPT5H	ENST00000599117.5	protein_coding	39441643,39445441,39445804,39453356,39457675,39458294,39458818,39459005,39459184,39459559,39459892,39464798,39466480,39466675,39468756,39469079,39469262,39470119,39470377,39471357,39471605,39472409,39472810,39473012,39473203,39473416,39473963,39474234,39474515,39476081,39476256	39441725,39445637,39445965,39453521,39457740,39458305,39458887,39459073,39459249,39459589,39459960,39465049,39466569,39466745,39468861,39469172,39469398,39470274,39470523,39471503,39471730,39472493,39472929,39473114,39473330,39473521,39474121,39474402,39474718,39476176,39476670	Gene ID= ENSG00000196235.13 TPM= 128.14 Transcript Type= protein_coding
chr19	39445578	39476670	39445578	39476670	+	transcript5750.chr19.nic@SUPT5H	transcript5750.chr19.nic	protein_coding	39445578,39445882,39453356,39457675,39458294,39458818,39459005,39459184,39459559,39459892,39464798,39466480,39466675,39468756,39469079,39469262,39470119,39470377,39471357,39471605,39472409,39472810,39473012,39473203,39473416,39473963,39474234,39474515,39476081,39476256	39445637,39445965,39453521,39457740,39458305,39458887,39459073,39459249,39459589,39459960,39465049,39466569,39466745,39468861,39469172,39469398,39470274,39470523,39471503,39471730,39472493,39472929,39473114,39473330,39473521,39474121,39474402,39474718,39476176,39476670	Gene ID= ENSG00000196235.13 TPM= 21.31 Transcript Type= NA
chr19	39445546	39476666	39445546	39476666	+	ENST00000402194.6@SUPT5H	ENST00000402194.6	protein_coding	39445546,39445804,39453356,39457675,39458818,39459005,39459184,39459559,39459892,39464798,39466480,39466675,39468756,39469079,39469262,39470119,39470377,39471357,39471605,39472409,39472810,39473012,39473203,39473416,39473963,39474234,39474515,39476081,39476256	39445637,39445965,39453521,39457740,39458887,39459073,39459249,39459589,39459960,39465049,39466569,39466745,39468861,39469172,39469398,39470274,39470523,39471503,39471730,39472493,39472929,39473114,39473330,39473521,39474121,39474402,39474718,39476176,39476666	Gene ID= ENSG00000196235.13 TPM= 15.76 Transcript Type= protein_coding
chr19	39445684	39476670	39445684	39476670	+	ENST00000598725.5@SUPT5H	ENST00000598725.5	protein_coding	39445684,39453356,39457675,39458294,39458818,39459005,39459184,39459559,39459892,39464798,39466480,39466675,39468756,39469079,39469262,39470119,39470377,39471357,39471605,39472409,39472810,39473012,39473203,39473416,39473963,39474234,39474515,39476081,39476256	39445965,39453521,39457740,39458305,39458887,39459073,39459249,39459589,39459960,39465049,39466569,39466745,39468861,39469172,39469398,39470274,39470523,39471503,39471730,39472493,39472929,39473114,39473330,39473521,39474121,39474402,39474718,39476176,39476670	Gene ID= ENSG00000196235.13 TPM= 30.07 Transcript Type= protein_coding
chr19	39445644	39476670	39445644	39476670	+	ENST00000359191.10@SUPT5H	ENST00000359191.10	protein_coding	39445644,39453356,39457675,39458818,39459005,39459184,39459559,39459892,39464798,39466480,39466675,39468756,39469079,39469262,39470119,39470377,39471357,39471605,39472409,39472810,39473012,39473203,39473416,39473963,39474234,39474515,39476081,39476256	39445965,39453521,39457740,39458887,39459073,39459249,39459589,39459960,39465049,39466569,39466745,39468861,39469172,39469398,39470274,39470523,39471503,39471730,39472493,39472929,39473114,39473330,39473521,39474121,39474402,39474718,39476176,39476670	Gene ID= ENSG00000196235.13 TPM= 19.56 Transcript Type= protein_coding
chr19	39480412	39489928	39480412	39489928	+	ENST00000314349.8@TIMM50	ENST00000314349.8	protein_coding	39480412,39481883,39482885,39483135,39485544,39485688,39486187,39486397,39488061,39488539,39489719	39480961,39482033,39482916,39483156,39485602,39485807,39486291,39486495,39488217,39488645,39489928	Gene ID= ENSG00000105197.10 TPM= 60.71 Transcript Type= protein_coding
chr19	39480412	39490888	39480412	39490888	+	ENST00000544017.5@TIMM50	ENST00000544017.5	protein_coding	39480412,39481883,39482885,39483135,39485544,39485688,39486187,39486397,39488061,39488539,39489719	39480961,39482033,39482916,39483156,39485602,39485807,39486291,39486495,39488217,39488645,39490888	Gene ID= ENSG00000105197.10 TPM= 4.67 Transcript Type= protein_coding
chr19	39480832	39490074	39480832	39490074	+	ENST00000607714.5@TIMM50	ENST00000607714.5	protein_coding	39480832,39481883,39482885,39483135,39485544,39485688,39486187,39486397,39488061,39488539,39489719	39480961,39482033,39482916,39483156,39485602,39485807,39486291,39486495,39488217,39488645,39490074	Gene ID= ENSG00000105197.10 TPM= 5.84 Transcript Type= protein_coding
chr19	39531540	39532845	39531540	39532845	-	transcript5779.chr19.nnic@NA	transcript5779.chr19.nnic	NA	39531540	39532845	Gene ID= novel_gene_chr19_5780 TPM= 3.5 Transcript Type= NA
chr19	39538705	39540333	39538705	39540333	-	ENST00000390658.3@EID2	ENST00000390658.3	protein_coding	39538705	39540333	Gene ID= ENSG00000176396.10 TPM= 9.34 Transcript Type= protein_coding
chr19	39825350	39834201	39825350	39834201	-	ENST00000323039.9@DYRK1B	ENST00000323039.9	protein_coding	39834023,39831805,39830664,39830375,39829880,39828297,39827510,39827285,39826672,39826180,39825350	39834201,39831968,39830783,39830563,39830027,39828583,39827656,39827425,39826987,39826286,39826086	Gene ID= ENSG00000105204.13 TPM= 14.01 Transcript Type= protein_coding
chr19	39834458	39846414	39834458	39846414	-	ENST00000221801.7@FBL	ENST00000221801.7	protein_coding	39846291,39840617,39840414,39840233,39839035,39837711,39836556,39834668,39834458	39846414,39840787,39840515,39840327,39839205,39837843,39836668,39834813,39834562	Gene ID= ENSG00000105202.8 TPM= 110.92 Transcript Type= protein_coding
chr19	39863323	39906323	39863323	39906323	-	ENST00000616721.5@FCGBP	ENST00000616721.5	protein_coding	39905731,39902243,39901925,39899556,39895806,39893922,39892911,39891643,39889479,39885991,39885673,39883305,39879555,39877663,39876658,39875388,39873224,39872078,39870216,39866737,39863621,39863323	39906323,39902837,39902124,39899697,39896143,39894495,39893527,39892186,39890071,39886585,39885872,39883446,39879892,39878236,39877274,39875931,39873795,39872651,39870415,39867120,39863892,39863496	Gene ID= ENSG00000275395.5 TPM= 11.68 Transcript Type= protein_coding
chr19	39971005	39981441	39971005	39981441	+	ENST00000157812.6@PSMC4	ENST00000157812.6	protein_coding	39971005,39972146,39972369,39974294,39974524,39974735,39979817,39980070,39980286,39980662,39981192	39971238,39972244,39972555,39974440,39974633,39974828,39979984,39980146,39980454,39980717,39981441	Gene ID= ENSG00000013275.7 TPM= 72.39 Transcript Type= protein_coding
chr19	39971170	39981408	39971170	39981408	+	ENST00000593455.5@PSMC4	ENST00000593455.5	protein_coding	39971170,39972146,39972369,39974294,39974524,39974735,39979817,39980070,39980662,39981192	39971238,39972244,39972555,39974440,39974633,39974828,39979984,39980454,39980717,39981408	Gene ID= ENSG00000013275.7 TPM= 4.67 Transcript Type= retained_intron
chr19	40075974	40090938	40075974	40090938	-	ENST00000595773.5@ZNF780A	ENST00000595773.5	protein_coding	40090906,40084745,40083111,40081819,40075974	40090938,40084798,40083237,40081914,40076209	Gene ID= ENSG00000197782.14 TPM= 1.17 Transcript Type= protein_coding
chr19	40076123	40090938	40076123	40090938	-	ENST00000601688.5@ZNF780A	ENST00000601688.5	protein_coding	40090906,40090166,40084745,40083111,40081819,40076123	40090938,40090235,40084798,40083237,40081914,40076209	Gene ID= ENSG00000197782.14 TPM= 2.34 Transcript Type= non_stop_decay
chr19	40230317	40285395	40230317	40285395	-	ENST00000392038.6@AKT2	ENST00000392038.6	protein_coding	40285181,40265222,40256926,40255158,40242534,40241938,40240045,40238905,40237969,40236257,40235890,40235263,40235045,40230317	40285395,40265351,40257054,40255269,40242687,40242069,40240110,40238973,40238091,40236385,40236104,40235350,40235147,40233951	Gene ID= ENSG00000105221.16 TPM= 16.35 Transcript Type= protein_coding
chr19	40273477	40275249	40273477	40275249	-	transcript5833.chr19.nnic@NA	transcript5833.chr19.nnic	NA	40273477	40275249	Gene ID= novel_gene_chr19_5834 TPM= 3.5 Transcript Type= NA
chr19	40321063	40348420	40321063	40348420	-	transcript5859.chr19.nic@C19orf47	transcript5859.chr19.nic	protein_coding	40348324,40341839,40336320,40336110,40333851,40328413,40326334,40324006,40321063	40348420,40341890,40336407,40336224,40333929,40328550,40326486,40324076,40322376	Gene ID= ENSG00000160392.13 TPM= 7.01 Transcript Type= NA
chr19	40348653	40378483	40348653	40378483	+	transcript5840.chr19.nic@PLD3	transcript5840.chr19.nic	protein_coding	40348653,40365553,40366384,40366610,40366773,40367696,40369908,40370110,40371673,40374481,40376609,40377786,40377986	40348768,40365930,40366510,40366684,40366915,40367879,40370028,40370237,40371873,40374620,40376774,40377885,40378483	Gene ID= ENSG00000105223.19 TPM= 41.34 Transcript Type= NA
chr19	40348653	40378483	40348653	40378483	+	transcript5842.chr19.nic@PLD3	transcript5842.chr19.nic	protein_coding	40348653,40365553,40366419,40366610,40366773,40367696,40369908,40370110,40371673,40374481,40376609,40377786,40377986	40348768,40365930,40366510,40366684,40366915,40367879,40370028,40370237,40371873,40374620,40376774,40377885,40378483	Gene ID= ENSG00000105223.19 TPM= 135.6 Transcript Type= NA
chr19	40348685	40378483	40348685	40378483	+	ENST00000409587.5@PLD3	ENST00000409587.5	protein_coding	40348685,40365718,40366384,40366610,40366773,40367696,40369908,40370110,40371673,40374481,40376609,40377786,40377986	40348768,40365930,40366510,40366684,40366915,40367879,40370028,40370237,40371873,40374620,40376774,40377885,40378483	Gene ID= ENSG00000105223.19 TPM= 32 Transcript Type= protein_coding
chr19	40348690	40378483	40348690	40378483	+	ENST00000409735.8@PLD3	ENST00000409735.8	protein_coding	40348690,40365718,40366419,40366610,40366773,40367696,40369908,40370110,40371673,40374481,40376609,40377786,40377986	40348768,40365930,40366510,40366684,40366915,40367879,40370028,40370237,40371873,40374620,40376774,40377885,40378483	Gene ID= ENSG00000105223.19 TPM= 90.47 Transcript Type= protein_coding
chr19	40348695	40378483	40348695	40378483	+	transcript5849.chr19.nic@PLD3	transcript5849.chr19.nic	protein_coding	40348695,40365662,40366419,40366610,40366773,40367696,40369908,40370110,40371673,40374481,40376609,40377786,40377986	40348768,40365930,40366510,40366684,40366915,40367879,40370028,40370237,40371873,40374620,40376774,40377885,40378483	Gene ID= ENSG00000105223.19 TPM= 77.22 Transcript Type= NA
chr19	40348700	40378483	40348700	40378483	+	ENST00000356508.9@PLD3	ENST00000356508.9	protein_coding	40348700,40365553,40366419,40366610,40366773,40367696,40369908,40370110,40371673,40374481,40376609,40377786,40377986	40348724,40365585,40366510,40366684,40366915,40367879,40370028,40370237,40371873,40374620,40376774,40377885,40378483	Gene ID= ENSG00000105223.19 TPM= 47.96 Transcript Type= protein_coding
chr19	40348678	40378475	40348678	40378475	+	ENST00000409419.5@PLD3	ENST00000409419.5	protein_coding	40348678,40366384,40366610,40366773,40367696,40369908,40370110,40371673,40374481,40376609,40377786,40377986	40348768,40366510,40366684,40366915,40367879,40370028,40370237,40371873,40374620,40376774,40377885,40378475	Gene ID= ENSG00000105223.19 TPM= 11.87 Transcript Type= protein_coding
chr19	40355842	40360606	40355842	40360606	+	ENST00000622968.1@AC118344.2	ENST00000622968.1	TEC	40355842	40360606	Gene ID= ENSG00000279759.1 TPM= 7.01 Transcript Type= TEC
chr19	40407266	40413396	40407266	40413396	-	transcript5868.chr19.nic@PRX	transcript5868.chr19.nic	protein_coding	40413338,40408340,40408158,40407906,40407266	40413396,40408383,40408256,40408031,40407719	Gene ID= ENSG00000105227.14 TPM= 11.68 Transcript Type= NA
chr19	40393768	40404298	40393768	40404298	-	transcript5871.chr19.nic@PRX	transcript5871.chr19.nic	protein_coding	40403706,40398620,40393768	40404298,40398816,40397970	Gene ID= ENSG00000105227.14 TPM= 28.02 Transcript Type= NA
chr19	40393768	40413366	40393768	40413366	-	ENST00000324001.7@PRX	ENST00000324001.7	protein_coding	40413338,40408340,40408158,40407906,40403706,40398620,40393768	40413366,40408383,40408256,40408031,40403862,40398816,40397970	Gene ID= ENSG00000105227.14 TPM= 47.87 Transcript Type= protein_coding
chr19	40393768	40413364	40393768	40413364	-	ENST00000291825.11@PRX	ENST00000291825.11	protein_coding	40413338,40408340,40408158,40407906,40403706,40393768	40413364,40408383,40408256,40408031,40403862,40398816	Gene ID= ENSG00000105227.14 TPM= 23.35 Transcript Type= protein_coding
chr19	40421592	40426025	40421592	40426025	-	ENST00000357949.4@SERTAD1	ENST00000357949.4	protein_coding	40425867,40421592	40426025,40423546	Gene ID= ENSG00000197019.4 TPM= 56.04 Transcript Type= protein_coding
chr19	40440843	40444346	40440843	40444346	-	transcript5875.chr19.nnic@SERTAD3	transcript5875.chr19.nnic	protein_coding	40444215,40442323,40440843	40444346,40442488,40442086	Gene ID= ENSG00000167565.12 TPM= 3.5 Transcript Type= NA
chr19	40440844	40444705	40440844	40444705	-	ENST00000322354.3@SERTAD3	ENST00000322354.3	protein_coding	40444215,40440844	40444705,40442086	Gene ID= ENSG00000167565.12 TPM= 45.54 Transcript Type= protein_coding
chr19	40447789	40465840	40447789	40465840	-	ENST00000263368.8@BLVRB	ENST00000263368.8	protein_coding	40465610,40458381,40458155,40451364,40447789	40465840,40458545,40458244,40451492,40448046	Gene ID= ENSG00000090013.9 TPM= 108.59 Transcript Type= protein_coding
chr19	40461077	40462343	40461077	40462343	+	transcript5879.chr19.nnic@NA	transcript5879.chr19.nnic	NA	40461077	40462343	Gene ID= novel_gene_chr19_5880 TPM= 2.34 Transcript Type= NA
chr19	40576844	40591397	40576844	40591397	+	transcript5893.chr19.nnic@SHKBP1	transcript5893.chr19.nnic	protein_coding	40576844,40577231,40577396,40577557,40578154,40578462,40580324,40580566,40580746,40586774,40588624,40589082,40590244,40590730,40590976	40576985,40577284,40577441,40577630,40578212,40578542,40580485,40580656,40580936,40586944,40588779,40589178,40590422,40590853,40591397	Gene ID= ENSG00000160410.14 TPM= 15.76 Transcript Type= NA
chr19	40576851	40591397	40576851	40591397	+	ENST00000291842.9@SHKBP1	ENST00000291842.9	protein_coding	40576851,40577231,40577396,40577557,40578154,40578462,40580324,40580566,40580746,40582351,40583398,40583601,40586774,40588624,40589082,40590244,40590730,40590976	40576985,40577284,40577441,40577630,40578212,40578542,40580485,40580656,40580936,40582466,40583485,40583717,40586944,40588779,40589178,40590422,40590853,40591397	Gene ID= ENSG00000160410.14 TPM= 186.82 Transcript Type= protein_coding
chr19	40601327	40629818	40601327	40629818	+	transcript5902.chr19.nic@LTBP4	transcript5902.chr19.nic	protein_coding	40601327,40605035,40605405,40605729,40606233,40606404,40607365,40608220,40608484,40609530,40609746,40610532,40611152,40611859,40612073,40613065,40613404,40613916,40614315,40616889,40619347,40622401,40622950,40623604,40623936,40625857,40626975,40627705,40629396	40601637,40605226,40605652,40605831,40606307,40606526,40607529,40608369,40608603,40609661,40609871,40610657,40611394,40611984,40612192,40613196,40613529,40614038,40614446,40617020,40619493,40622667,40623021,40623732,40624082,40626009,40627355,40627857,40629818	Gene ID= ENSG00000090006.17 TPM= 70.77 Transcript Type= NA
chr19	40601321	40629818	40601321	40629818	+	transcript5903.chr19.nic@LTBP4	transcript5903.chr19.nic	protein_coding	40601321,40605035,40605405,40605729,40606233,40606404,40607365,40608220,40608484,40609530,40609746,40610532,40611152,40611859,40612073,40613065,40613404,40613916,40614315,40617100,40619347,40622401,40622950,40623604,40623936,40625857,40626975,40627705,40629396	40601637,40605226,40605652,40605831,40606307,40606526,40607529,40608369,40608603,40609661,40609871,40610657,40611394,40611984,40612192,40613196,40613529,40614038,40614446,40617225,40619493,40622667,40623021,40623732,40624082,40626009,40627355,40627857,40629818	Gene ID= ENSG00000090006.17 TPM= 150.75 Transcript Type= NA
chr19	40601307	40629818	40601307	40629818	+	transcript5907.chr19.nic@LTBP4	transcript5907.chr19.nic	protein_coding	40601307,40605035,40605405,40605729,40606233,40606404,40607365,40608220,40608484,40609530,40609746,40610532,40611152,40611859,40612073,40613065,40613404,40613916,40614315,40616889,40617100,40619347,40623604,40623936,40625857,40626975,40627705,40629396	40601637,40605226,40605652,40605831,40606307,40606526,40607529,40608369,40608603,40609661,40609871,40610657,40611394,40611984,40612192,40613196,40613529,40614038,40614446,40617020,40617225,40619493,40623732,40624082,40626009,40627355,40627857,40629818	Gene ID= ENSG00000090006.17 TPM= 43.04 Transcript Type= NA
chr19	40601163	40629818	40601163	40629818	+	transcript5909.chr19.nic@LTBP4	transcript5909.chr19.nic	protein_coding	40601163,40605035,40605405,40605729,40606233,40606404,40607365,40608220,40608484,40609530,40609746,40610532,40611152,40611859,40612073,40613065,40613404,40613916,40614315,40619347,40622401,40622950,40623604,40623936,40625857,40626975,40627705,40629396	40601637,40605226,40605652,40605831,40606307,40606526,40607529,40608369,40608603,40609661,40609871,40610657,40611394,40611984,40612192,40613196,40613529,40614038,40614446,40619493,40622667,40623021,40623732,40624082,40626009,40627355,40627857,40629818	Gene ID= ENSG00000090006.17 TPM= 94.12 Transcript Type= NA
chr19	40691530	40718242	40691530	40718242	-	transcript5933.chr19.nnic@COQ8B	transcript5933.chr19.nnic	protein_coding	40718078,40716862,40716587,40714531,40714278,40714067,40710059,40705325,40705096,40703715,40703541,40702600,40700310,40700067,40695989,40692951,40691530	40718242,40716979,40716703,40714635,40714397,40714133,40710136,40705447,40705181,40703855,40703622,40702693,40700451,40700174,40696054,40693037,40692373	Gene ID= ENSG00000123815.11 TPM= 3.35 Transcript Type= NA
chr19	40691530	40715122	40691530	40715122	-	transcript5937.chr19.nic@COQ8B	transcript5937.chr19.nic	protein_coding	40715057,40714531,40714278,40714067,40710059,40705325,40705096,40703715,40703541,40702600,40700310,40700067,40695989,40692951,40691530	40715122,40714635,40714397,40714133,40710136,40705447,40705181,40703855,40703622,40702693,40700451,40700174,40696054,40693037,40692373	Gene ID= ENSG00000123815.11 TPM= 5.69 Transcript Type= NA
chr19	40691530	40715607	40691530	40715607	-	transcript5938.chr19.nic@COQ8B	transcript5938.chr19.nic	protein_coding	40715325,40714531,40714278,40714067,40710059,40705325,40705096,40703715,40703541,40702600,40700310,40700067,40695989,40692951,40691530	40715607,40714635,40714397,40714133,40710136,40705447,40705181,40703855,40703622,40702693,40700451,40700174,40696054,40693037,40692373	Gene ID= ENSG00000123815.11 TPM= 3.35 Transcript Type= NA
chr19	40691530	40716920	40691530	40716920	-	transcript5941.chr19.nic@COQ8B	transcript5941.chr19.nic	protein_coding	40716862,40714531,40714278,40714067,40710059,40705325,40705096,40703715,40703541,40702600,40700310,40700067,40695989,40692951,40691530	40716920,40714635,40714397,40714133,40710136,40705447,40705181,40703855,40703622,40702693,40700451,40700174,40696054,40693037,40692373	Gene ID= ENSG00000123815.11 TPM= 10.36 Transcript Type= NA
chr19	40691530	40715122	40691530	40715122	-	transcript5946.chr19.nic@COQ8B	transcript5946.chr19.nic	protein_coding	40715057,40714531,40714278,40714067,40710059,40705096,40703715,40703541,40702600,40700310,40700067,40695989,40692951,40691530	40715122,40714635,40714397,40714133,40710136,40705447,40703855,40703622,40702693,40700451,40700174,40696054,40693037,40692373	Gene ID= ENSG00000123815.11 TPM= 4.29 Transcript Type= NA
chr19	40716961	40740860	40716961	40740860	+	transcript5961.chr19.nnic@ITPKC	transcript5961.chr19.nnic	protein_coding	40716961,40725340,40729202,40733160,40736986,40737698,40739357,40740088	40718290,40725439,40729415,40733364,40737087,40737769,40739579,40740860	Gene ID= ENSG00000086544.2 TPM= 4.67 Transcript Type= NA
chr19	40717013	40738145	40717013	40738145	+	transcript5969.chr19.nic@ITPKC	transcript5969.chr19.nic	protein_coding	40717013,40725340,40729202,40733160,40736986,40737698	40718290,40725439,40729415,40733364,40737087,40738145	Gene ID= ENSG00000086544.2 TPM= 4.67 Transcript Type= NA
chr19	40716961	40740860	40716961	40740860	+	transcript5971.chr19.nic@ITPKC	transcript5971.chr19.nic	protein_coding	40716961,40725340,40729202,40736986,40737698,40739357	40718290,40725439,40729415,40737087,40737769,40740860	Gene ID= ENSG00000086544.2 TPM= 8.17 Transcript Type= NA
chr19	40717103	40740860	40717103	40740860	+	ENST00000263370.2@ITPKC	ENST00000263370.2	protein_coding	40717103,40725340,40729202,40733160,40736986,40737698,40739357	40718290,40725439,40729415,40733364,40737087,40737769,40740860	Gene ID= ENSG00000086544.2 TPM= 164.63 Transcript Type= protein_coding
chr19	40740856	40750553	40740856	40750553	-	ENST00000469741.6@C19orf54	ENST00000469741.6	protein_coding	40750285,40749481,40745130,40744559,40744067,40743915,40742515,40741694,40740856	40750553,40749607,40745198,40744683,40744196,40743975,40742770,40741864,40741439	Gene ID= ENSG00000188493.14 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr19	40740856	40744845	40740856	40744845	-	transcript5982.chr19.nic@C19orf54	transcript5982.chr19.nic	protein_coding	40744559,40744067,40743905,40740856	40744845,40744196,40743975,40742770	Gene ID= ENSG00000188493.14 TPM= 21.02 Transcript Type= NA
chr19	40750859	40765389	40750859	40765389	+	ENST00000243563.7@SNRPA	ENST00000243563.7	protein_coding	40750859,40757332,40759431,40762901,40763587,40765008	40751481,40757504,40759610,40763074,40763675,40765389	Gene ID= ENSG00000077312.8 TPM= 39.7 Transcript Type= protein_coding
chr19	40778216	40792572	40778216	40792572	+	ENST00000594800.5@RAB4B	ENST00000594800.5	protein_coding	40778216,40780019,40780385,40783778,40783921,40786665,40786848,40792217	40778391,40780099,40780499,40783840,40784075,40786760,40786978,40792572	Gene ID= ENSG00000167578.17 TPM= 1.55 Transcript Type= protein_coding
chr19	40778213	40796938	40778213	40796938	+	transcript5993.chr19.nic@RAB4B	transcript5993.chr19.nic	protein_coding	40778213,40780019,40783778,40783921,40786665,40786848,40796570	40778391,40780499,40783840,40784075,40786760,40786978,40796938	Gene ID= ENSG00000167578.17 TPM= 23.74 Transcript Type= NA
chr19	40778266	40796935	40778266	40796935	+	ENST00000357052.7@RAB4B	ENST00000357052.7	protein_coding	40778266,40780019,40780385,40783778,40783921,40786665,40786848,40796570	40778391,40780099,40780499,40783840,40784075,40786760,40786978,40796935	Gene ID= ENSG00000167578.17 TPM= 77.45 Transcript Type= protein_coding
chr19	40790666	40793173	40790666	40793173	-	transcript6025.chr19.nnic@NA	transcript6025.chr19.nnic	NA	40790666	40793173	Gene ID= novel_gene_chr19_6026 TPM= 9.34 Transcript Type= NA
chr19	40799515	40808432	40799515	40808432	+	ENST00000406058.6@EGLN2	ENST00000406058.6	protein_coding	40799515,40800339,40806555,40807138,40807484,40807809	40799638,40801415,40806674,40807274,40807551,40808432	Gene ID= ENSG00000269858.5 TPM= 66.42 Transcript Type= protein_coding
chr19	40799187	40808432	40799187	40808432	+	ENST00000303961.8@EGLN2	ENST00000303961.8	protein_coding	40799187,40800339,40806555,40807138,40807484,40807809	40799262,40801415,40806674,40807274,40807551,40808432	Gene ID= ENSG00000269858.5 TPM= 487.93 Transcript Type= protein_coding
chr19	40803140	40808378	40803140	40808378	+	ENST00000594140.5@EGLN2	ENST00000594140.5	protein_coding	40803140,40806555,40807138,40807484,40807809	40803235,40806674,40807274,40807551,40808378	Gene ID= ENSG00000269858.5 TPM= 1.17 Transcript Type= protein_coding
chr19	40808448	40810811	40808448	40810811	-	transcript6027.chr19.nnic@NA	transcript6027.chr19.nnic	NA	40808448	40810811	Gene ID= novel_gene_chr19_6028 TPM= 4.67 Transcript Type= NA
chr19	40924219	40950660	40924219	40950660	+	ENST00000599198.5@CYP2B7P	ENST00000599198.5	transcribed_unprocessed_pseudogene	40924219,40936097,40936392,40938969,40941296,40942065,40944331,40944711,40949053	40924443,40936259,40936541,40939129,40941472,40942206,40944518,40944852,40950660	Gene ID= ENSG00000256612.7 TPM= 56.42 Transcript Type= processed_transcript
chr19	40924243	40945282	40924243	40945282	+	transcript6038.chr19.nic@CYP2B7P	transcript6038.chr19.nic	transcribed_unprocessed_pseudogene	40924243,40936097,40936392,40938969,40941296,40942065,40944331,40944711	40924443,40936259,40936541,40939129,40941472,40942206,40944518,40945282	Gene ID= ENSG00000256612.7 TPM= 21.02 Transcript Type= NA
chr19	40939523	40950660	40939523	40950660	+	transcript6047.chr19.nic@CYP2B7P	transcript6047.chr19.nic	transcribed_unprocessed_pseudogene	40939523,40942065,40944331,40944711,40949053	40941472,40942206,40944518,40944852,40950660	Gene ID= ENSG00000256612.7 TPM= 126.86 Transcript Type= NA
chr19	40935531	40936144	40935531	40936144	-	transcript6070.chr19.nnic@NA	transcript6070.chr19.nnic	NA	40935531	40936144	Gene ID= novel_gene_chr19_6071 TPM= 3.5 Transcript Type= NA
chr19	40946348	40950041	40946348	40950041	-	transcript6068.chr19.nnic@NA	transcript6068.chr19.nnic	NA	40946348	40950041	Gene ID= novel_gene_chr19_6069 TPM= 4.87 Transcript Type= NA
chr19	41219235	41260294	41219235	41260294	+	ENST00000359092.7@AXL	ENST00000359092.7	protein_coding	41219235,41220636,41221146,41221880,41230967,41231183,41237944,41238470,41239164,41242883,41243616,41248514,41248743,41252351,41252846,41253599,41256452,41257493,41259553	41219477,41220858,41221246,41222056,41231047,41231298,41238154,41238609,41239314,41243015,41243707,41248609,41248820,41252443,41252967,41253708,41256611,41257629,41260294	Gene ID= ENSG00000167601.11 TPM= 25.69 Transcript Type= protein_coding
chr19	41219203	41261766	41219203	41261766	+	ENST00000301178.8@AXL	ENST00000301178.8	protein_coding	41219203,41220636,41221146,41221880,41230967,41231183,41237944,41238470,41239164,41239694,41242883,41243616,41248514,41248743,41252351,41252846,41253599,41256452,41257493,41259553	41219477,41220858,41221246,41222056,41231047,41231298,41238154,41238609,41239314,41239720,41243015,41243707,41248609,41248820,41252443,41252967,41253708,41256611,41257629,41261766	Gene ID= ENSG00000167601.11 TPM= 87.57 Transcript Type= protein_coding
chr19	41262496	41307598	41262496	41307598	+	ENST00000352456.7@HNRNPUL1	ENST00000352456.7	protein_coding	41262496,41268223,41272082,41273982,41276159,41279077,41281163,41292245,41294338,41294558,41301536,41302665,41303972,41305646,41306449	41262582,41268345,41272235,41274055,41276298,41279176,41281275,41292511,41294460,41294686,41301704,41302949,41304261,41305867,41307598	Gene ID= ENSG00000105323.16 TPM= 8.34 Transcript Type= protein_coding
chr19	41264331	41307376	41264331	41307376	+	ENST00000392006.7@HNRNPUL1	ENST00000392006.7	protein_coding	41264331,41268223,41272082,41273982,41276159,41279077,41281163,41292245,41294338,41294558,41301536,41302665,41303972,41305676,41306449	41264798,41268345,41272235,41274055,41276298,41279176,41281275,41292511,41294460,41294686,41301704,41302949,41304261,41305867,41307376	Gene ID= ENSG00000105323.16 TPM= 55.86 Transcript Type= protein_coding
chr19	41262519	41307019	41262519	41307019	+	ENST00000595018.5@HNRNPUL1	ENST00000595018.5	protein_coding	41262519,41268223,41272082,41273982,41276159,41279077,41281163,41292245,41294338,41294558,41301536,41302665,41303972,41305676,41306449	41262582,41268345,41272235,41274055,41276298,41279176,41281275,41292511,41294460,41294686,41301704,41302949,41304261,41305867,41307019	Gene ID= ENSG00000105323.16 TPM= 2.73 Transcript Type= protein_coding
chr19	41264411	41307050	41264411	41307050	+	ENST00000595196.5@HNRNPUL1	ENST00000595196.5	protein_coding	41264411,41268223,41272082,41273982,41276159,41279077,41281163,41292245,41294338,41294558,41301536,41302665,41303972,41305676,41306449	41264692,41268345,41272235,41274055,41276298,41279176,41281275,41292511,41294460,41294686,41301704,41302949,41304261,41305867,41307050	Gene ID= ENSG00000105323.16 TPM= 27.25 Transcript Type= nonsense_mediated_decay
chr19	41265122	41307019	41265122	41307019	+	ENST00000263367.7@HNRNPUL1	ENST00000263367.7	protein_coding	41265122,41268223,41272082,41273982,41276159,41279077,41281163,41292245,41294338,41294558,41301536,41302665,41303972,41305676,41306449	41265343,41268345,41272235,41274055,41276298,41279176,41281275,41292511,41294460,41294686,41301704,41302949,41304261,41305867,41307019	Gene ID= ENSG00000105323.16 TPM= 1.56 Transcript Type= protein_coding
chr19	41310217	41320997	41310217	41320997	+	transcript6136.chr19.nic@CCDC97	transcript6136.chr19.nic	protein_coding	41310217,41316384,41319574,41320341	41310356,41316839,41319852,41320997	Gene ID= ENSG00000142039.3 TPM= 4.67 Transcript Type= NA
chr19	41310189	41324883	41310189	41324883	+	ENST00000269967.3@CCDC97	ENST00000269967.3	protein_coding	41310189,41316384,41319574,41320341,41322595	41310356,41316839,41319852,41320470,41324883	Gene ID= ENSG00000142039.3 TPM= 59.55 Transcript Type= protein_coding
chr19	41350911	41384083	41350911	41384083	+	ENST00000539627.5@TMEM91	ENST00000539627.5	protein_coding	41350911,41378281,41382772	41351202,41378519,41384083	Gene ID= ENSG00000142046.14 TPM= 4.67 Transcript Type= protein_coding
chr19	41376578	41384083	41376578	41384083	+	ENST00000436170.6@TMEM91	ENST00000436170.6	protein_coding	41376578,41378281,41382772,41383886	41376854,41378519,41382921,41384083	Gene ID= ENSG00000142046.14 TPM= 1.75 Transcript Type= protein_coding
chr19	41376773	41384060	41376773	41384060	+	ENST00000542945.5@TMEM91	ENST00000542945.5	protein_coding	41376773,41378281,41382772	41376854,41378519,41384060	Gene ID= ENSG00000142046.14 TPM= 5.84 Transcript Type= protein_coding
chr19	41376733	41384083	41376733	41384083	+	ENST00000447302.6@TMEM91	ENST00000447302.6	protein_coding	41376733,41378281,41382772,41383874	41376854,41378519,41382921,41384083	Gene ID= ENSG00000142046.14 TPM= 1.75 Transcript Type= protein_coding
chr19	41354421	41364173	41354421	41364173	-	ENST00000243578.7@B9D2	ENST00000243578.7	protein_coding	41363958,41363432,41357897,41354421	41364173,41363523,41358022,41355013	Gene ID= ENSG00000123810.7 TPM= 9.34 Transcript Type= protein_coding
chr19	41386374	41397479	41386374	41397479	-	ENST00000221233.8@EXOSC5	ENST00000221233.8	protein_coding	41397181,41392867,41391841,41389765,41387514,41386374	41397479,41392980,41391962,41389905,41387603,41386725	Gene ID= ENSG00000077348.8 TPM= 22.18 Transcript Type= protein_coding
chr19	41397460	41425005	41397460	41425005	+	ENST00000269980.6@BCKDHA	ENST00000269980.6	protein_coding	41397460,41410637,41410923,41414049,41419135,41422164,41422629,41422998,41424438	41397935,41410816,41411009,41414157,41419296,41422370,41422770,41423169,41425005	Gene ID= ENSG00000248098.11 TPM= 85.23 Transcript Type= protein_coding
chr19	41421358	41424004	41421358	41424004	+	transcript6162.chr19.nnic@NA	transcript6162.chr19.nnic	NA	41421358	41424004	Gene ID= novel_gene_chr19_6163 TPM= 7.01 Transcript Type= NA
chr19	41422875	41427400	41422875	41427400	-	transcript6156.chr19.nic@B3GNT8	transcript6156.chr19.nic	protein_coding	41427284,41422875	41427400,41426810	Gene ID= ENSG00000177191.2 TPM= 5.84 Transcript Type= NA
chr19	41424254	41427458	41424254	41427458	-	transcript6159.chr19.nic@B3GNT8	transcript6159.chr19.nic	protein_coding	41427284,41424254	41427458,41426810	Gene ID= ENSG00000177191.2 TPM= 25.1 Transcript Type= NA
chr19	41425359	41428730	41425359	41428730	-	ENST00000321702.2@B3GNT8	ENST00000321702.2	protein_coding	41428596,41427284,41425359	41428730,41427570,41426810	Gene ID= ENSG00000177191.2 TPM= 58.96 Transcript Type= protein_coding
chr19	41431319	41447832	41431319	41447832	-	transcript6171.chr19.nnic@DMAC2	transcript6171.chr19.nnic	protein_coding	41447715,41438218,41436392,41433537,41433272,41431319	41447832,41438414,41436472,41433673,41433434,41432408	Gene ID= ENSG00000105341.18 TPM= 7.01 Transcript Type= NA
chr19	41431319	41447814	41431319	41447814	-	transcript6172.chr19.nnic@DMAC2	transcript6172.chr19.nnic	protein_coding	41447715,41433537,41433272,41431319	41447814,41433673,41433434,41432408	Gene ID= ENSG00000105341.18 TPM= 4.67 Transcript Type= NA
chr19	41431319	41439905	41431319	41439905	-	ENST00000221943.13@DMAC2	ENST00000221943.13	protein_coding	41439882,41438218,41436392,41433537,41433272,41431319	41439905,41438414,41436472,41433673,41433434,41432408	Gene ID= ENSG00000105341.18 TPM= 39.7 Transcript Type= protein_coding
chr19	41431339	41439936	41431339	41439936	-	ENST00000592922.6@DMAC2	ENST00000592922.6	protein_coding	41439882,41438218,41433537,41433272,41431339	41439936,41438414,41433673,41433434,41432408	Gene ID= ENSG00000105341.18 TPM= 2.34 Transcript Type= protein_coding
chr19	41431318	41439910	41431318	41439910	-	ENST00000438807.7@DMAC2	ENST00000438807.7	protein_coding	41439882,41438218,41433537,41431318	41439910,41438414,41433673,41432408	Gene ID= ENSG00000105341.18 TPM= 4.67 Transcript Type= protein_coding
chr19	41479128	41500655	41479128	41500655	-	transcript6180.chr19.nnic@PCAT19	transcript6180.chr19.nnic	lincRNA	41500584,41495302,41479128	41500655,41495427,41479284	Gene ID= ENSG00000267107.6 TPM= 8.17 Transcript Type= NA
chr19	41576157	41586844	41576157	41586844	+	transcript6186.chr19.nic@CEACAM21	transcript6186.chr19.nic	protein_coding	41576157,41577200,41579353,41584350,41585443,41585840,41586154,41586464	41576338,41577559,41579628,41584443,41585495,41585871,41586195,41586844	Gene ID= ENSG00000007129.17 TPM= 5.84 Transcript Type= NA
chr19	41576235	41586844	41576235	41586844	+	ENST00000187608.13@CEACAM21	ENST00000187608.13	protein_coding	41576235,41577200,41579353,41584350,41585443,41585840,41586464	41576338,41577559,41579628,41584443,41585495,41585871,41586844	Gene ID= ENSG00000007129.17 TPM= 2.34 Transcript Type= protein_coding
chr19	41618971	41627074	41618971	41627074	-	ENST00000221954.6@CEACAM4	ENST00000221954.6	protein_coding	41626900,41625601,41621651,41620575,41620211,41619670,41618971	41627074,41625960,41621768,41620627,41620242,41619711,41619395	Gene ID= ENSG00000105352.10 TPM= 2.34 Transcript Type= protein_coding
chr19	41755421	41772208	41755421	41772208	+	ENST00000199764.6@CEACAM6	ENST00000199764.6	protein_coding	41755421,41756600,41761249,41761969,41766183,41770802	41755702,41756959,41761527,41762223,41766299,41772208	Gene ID= ENSG00000086548.8 TPM= 1536.94 Transcript Type= protein_coding
chr19	41796437	41811553	41796437	41811553	+	ENST00000357396.7@CEACAM3	ENST00000357396.7	protein_coding	41796437,41797589,41808813,41809965,41810323,41810832,41811172	41796741,41797948,41808930,41810017,41810354,41810897,41811553	Gene ID= ENSG00000170956.16 TPM= 2.34 Transcript Type= protein_coding
chr19	41859918	41872926	41859918	41872926	+	ENST00000598742.5@RPS19	ENST00000598742.5	protein_coding	41859918,41860775,41861112,41869031,41869699,41871351	41860289,41860845,41861212,41869214,41869753,41872926	Gene ID= ENSG00000105372.6 TPM= 94.77 Transcript Type= protein_coding
chr19	41860257	41871416	41860257	41871416	+	ENST00000221975.6@RPS19	ENST00000221975.6	protein_coding	41860257,41860785,41861112,41869031,41869699,41871351	41860289,41860845,41861212,41869214,41869753,41871416	Gene ID= ENSG00000105372.6 TPM= 901 Transcript Type= protein_coding
chr19	41860446	41871416	41860446	41871416	+	ENST00000593863.5@RPS19	ENST00000593863.5	protein_coding	41860446,41860775,41861112,41869031,41869699,41871351	41860494,41860845,41861212,41869214,41869753,41871416	Gene ID= ENSG00000105372.6 TPM= 56.24 Transcript Type= protein_coding
chr19	41877120	41881372	41877120	41881372	+	ENST00000221972.7@CD79A	ENST00000221972.7	protein_coding	41877120,41878990,41879535,41880670,41880867	41877383,41879289,41879653,41880738,41881372	Gene ID= ENSG00000105369.9 TPM= 1.17 Transcript Type= protein_coding
chr19	41883079	41907452	41883079	41907452	+	transcript6242.chr19.nic@ARHGEF1	transcript6242.chr19.nic	protein_coding	41883079,41888064,41888192,41888752,41892025,41892331,41892603,41893274,41894207,41894451,41894626,41895349,41896377,41897315,41897946,41898442,41901887,41902274,41902533,41902784,41903307,41903707,41904035,41904216,41904949,41905175,41905760,41905939,41906457,41906703,41907105	41883289,41888106,41888278,41888865,41892123,41892373,41892849,41893303,41894306,41894547,41894661,41895486,41896482,41897326,41898113,41898587,41902033,41902356,41902658,41902898,41903407,41903784,41904110,41904383,41905036,41905261,41905827,41906025,41906620,41906803,41907452	Gene ID= ENSG00000076928.17 TPM= 40.7 Transcript Type= NA
chr19	41883161	41907443	41883161	41907443	+	ENST00000354532.7@ARHGEF1	ENST00000354532.7	protein_coding	41883161,41888064,41888192,41888752,41892025,41892331,41892603,41893274,41894207,41894451,41894626,41895349,41896377,41898442,41901887,41902274,41902533,41902784,41903307,41903707,41904035,41904216,41904949,41905175,41905760,41905939,41906457,41906703,41907105	41883289,41888106,41888278,41888865,41892123,41892373,41892849,41893303,41894306,41894547,41894661,41895486,41896482,41898587,41902033,41902356,41902658,41902898,41903407,41903784,41904110,41904383,41905036,41905261,41905827,41906025,41906620,41906803,41907443	Gene ID= ENSG00000076928.17 TPM= 129.7 Transcript Type= protein_coding
chr19	41883183	41907454	41883183	41907454	+	ENST00000600274.5@ARHGEF1	ENST00000600274.5	protein_coding	41883183,41888064,41888192,41888752,41892025,41892603,41893274,41894207,41894451,41894626,41895349,41896377,41898442,41901887,41902274,41902533,41902784,41903307,41903707,41904035,41904216,41904949,41905175,41905760,41905939,41906457,41906703,41907105	41883289,41888106,41888278,41888865,41892373,41892849,41893303,41894306,41894547,41894661,41895486,41896482,41898587,41902033,41902356,41902658,41902898,41903407,41903784,41904110,41904383,41905036,41905261,41905827,41906025,41906620,41906803,41907454	Gene ID= ENSG00000076928.17 TPM= 11.5 Transcript Type= retained_intron
chr19	41883184	41907448	41883184	41907448	+	ENST00000599846.5@ARHGEF1	ENST00000599846.5	protein_coding	41883184,41888064,41888192,41888752,41892025,41892331,41892603,41893274,41894207,41894451,41894626,41895349,41896377,41897946,41898442,41901887,41902274,41902533,41902784,41903307,41903707,41904035,41904216,41904949,41905175,41905760,41905939,41906457,41906703,41907105	41883289,41888106,41888278,41888865,41892123,41892373,41892849,41893303,41894306,41894547,41894661,41895486,41896482,41898113,41898587,41902033,41902356,41902658,41902898,41903407,41903784,41904110,41904383,41905036,41905261,41905827,41906025,41906620,41906803,41907448	Gene ID= ENSG00000076928.17 TPM= 26.03 Transcript Type= protein_coding
chr19	41884448	41907454	41884448	41907454	+	ENST00000337665.8@ARHGEF1	ENST00000337665.8	protein_coding	41884448,41888064,41888192,41888752,41892025,41892331,41892603,41893274,41894207,41894451,41894626,41895349,41896377,41898442,41901887,41902274,41902533,41902784,41903307,41903707,41904035,41904216,41904949,41905175,41905760,41905939,41906457,41906703,41907105	41884493,41888106,41888278,41888865,41892123,41892373,41892849,41893303,41894306,41894547,41894661,41895486,41896482,41898587,41902033,41902356,41902658,41902898,41903407,41903784,41904110,41904383,41905036,41905261,41905827,41906025,41906620,41906803,41907454	Gene ID= ENSG00000076928.17 TPM= 23.76 Transcript Type= protein_coding
chr19	41906670	41907445	41906670	41907445	+	transcript6260.chr19.nnic@NA	transcript6260.chr19.nnic	NA	41906670	41907445	Gene ID= novel_gene_chr19_6261 TPM= 5.25 Transcript Type= NA
chr19	41956681	41959390	41956681	41959390	-	ENST00000222008.10@RABAC1	ENST00000222008.10	protein_coding	41959237,41958736,41958286,41957018,41956681	41959390,41958948,41958383,41957119,41956934	Gene ID= ENSG00000105404.10 TPM= 200.83 Transcript Type= protein_coding
chr19	42076105	42081547	42076105	42081547	+	transcript6270.chr19.nnic@ZNF574	transcript6270.chr19.nnic	protein_coding	42076105,42078587,42081489	42076286,42081404,42081547	Gene ID= ENSG00000105732.12 TPM= 4.67 Transcript Type= NA
chr19	42091095	42132449	42091095	42132449	-	transcript6273.chr19.nic@POU2F2	transcript6273.chr19.nic	protein_coding	42132384,42122511,42122344,42122126,42117250,42099716,42099527,42096082,42095788,42095545,42095286,42093829,42092069,42091867,42091095	42132449,42122576,42122378,42122182,42117366,42099821,42099618,42096243,42095929,42095693,42095462,42093895,42092270,42091940,42091591	Gene ID= ENSG00000028277.21 TPM= 3.5 Transcript Type= NA
chr19	42198598	42217715	42198598	42217715	-	transcript6287.chr19.nic@DEDD2	transcript6287.chr19.nic	protein_coding	42215133,42209700,42198598	42217715,42209840,42199829	Gene ID= ENSG00000160570.13 TPM= 2.57 Transcript Type= NA
chr19	42198598	42217744	42198598	42217744	-	transcript6288.chr19.nnic@DEDD2	transcript6288.chr19.nnic	protein_coding	42217632,42209700,42198598	42217744,42209840,42199829	Gene ID= ENSG00000160570.13 TPM= 2.57 Transcript Type= NA
chr19	42198616	42217742	42198616	42217742	-	ENST00000593804.5@DEDD2	ENST00000593804.5	protein_coding	42217632,42215133,42209700,42198616	42217742,42215252,42209840,42199829	Gene ID= ENSG00000160570.13 TPM= 8.41 Transcript Type= processed_transcript
chr19	42198598	42217669	42198598	42217669	-	ENST00000336034.8@DEDD2	ENST00000336034.8	protein_coding	42217632,42216680,42215148,42209700,42198598	42217669,42217045,42215252,42209840,42199829	Gene ID= ENSG00000160570.13 TPM= 15.41 Transcript Type= protein_coding
chr19	42198613	42220123	42198613	42220123	-	ENST00000595337.5@DEDD2	ENST00000595337.5	protein_coding	42220074,42216680,42215133,42209700,42198613	42220123,42217045,42215252,42209840,42199829	Gene ID= ENSG00000160570.13 TPM= 1.4 Transcript Type= protein_coding
chr19	42220271	42228201	42220271	42228201	+	ENST00000301215.7@ZNF526	ENST00000301215.7	protein_coding	42220271,42224215,42224387	42220387,42224305,42228201	Gene ID= ENSG00000167625.10 TPM= 5.84 Transcript Type= protein_coding
chr19	42230186	42242593	42230186	42242593	-	ENST00000222330.7@GSK3A	ENST00000222330.7	protein_coding	42242183,42239955,42236858,42236606,42234548,42234353,42233286,42233110,42232496,42232057,42230186	42242593,42240142,42236941,42236716,42234678,42234459,42233383,42233205,42232682,42232149,42230867	Gene ID= ENSG00000105723.11 TPM= 39.7 Transcript Type= protein_coding
chr19	42230222	42242625	42230222	42242625	-	ENST00000453535.1@GSK3A	ENST00000453535.1	protein_coding	42242183,42239955,42236858,42236606,42234548,42234353,42233286,42233110,42232496,42232057,42230679,42230222	42242625,42240142,42236941,42236716,42234678,42234459,42233383,42233205,42232682,42232149,42230867,42230391	Gene ID= ENSG00000105723.11 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr19	42297033	42302777	42297033	42302777	-	ENST00000538771.5@PAFAH1B3	ENST00000538771.5	protein_coding	42302437,42302232,42301950,42300171,42299970,42297033	42302777,42302325,42302039,42300287,42300092,42297365	Gene ID= ENSG00000079462.7 TPM= 8.76 Transcript Type= protein_coding
chr19	42297033	42302571	42297033	42302571	-	ENST00000262890.7@PAFAH1B3	ENST00000262890.7	protein_coding	42302232,42301950,42300171,42299970,42297033	42302571,42302039,42300287,42300092,42297365	Gene ID= ENSG00000079462.7 TPM= 6.42 Transcript Type= protein_coding
chr19	42397128	42408452	42397128	42408452	+	ENST00000593491.2@LIPE-AS1	ENST00000593491.2	antisense_RNA	42397128,42408258	42397224,42408452	Gene ID= ENSG00000213904.8 TPM= 2.34 Transcript Type= antisense_RNA
chr19	42428731	42442922	42428731	42442922	-	transcript6318.chr19.nnic@CXCL17	transcript6318.chr19.nnic	protein_coding	42442754,42433788,42432976,42428731	42442922,42433856,42433077,42428981	Gene ID= ENSG00000189377.8 TPM= 2.34 Transcript Type= NA
chr19	42428533	42442852	42428533	42442852	-	ENST00000341918.4@CXCL17	ENST00000341918.4	protein_coding	42442754,42433776,42432976,42428533	42442852,42433856,42433094,42428981	Gene ID= ENSG00000189377.8 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr19	42507314	42528478	42507314	42528478	-	ENST00000403444.7@CEACAM1	ENST00000403444.7	protein_coding	42528311,42527041,42521924,42521267,42518948,42512350,42510889,42507314	42528478,42527400,42522202,42521521,42519235,42512479,42510920,42509228	Gene ID= ENSG00000079385.21 TPM= 4.67 Transcript Type= protein_coding
chr19	43353659	43363172	43353659	43363172	+	ENST00000618265.4@CD177	ENST00000618265.4	protein_coding	43353659,43353853,43354207,43355661,43355992,43360265,43361143,43361445,43362088	43353766,43353993,43354392,43355783,43356108,43360405,43361328,43361579,43363172	Gene ID= ENSG00000204936.9 TPM= 4.67 Transcript Type= protein_coding
chr19	43355105	43357896	43355105	43357896	+	transcript6329.chr19.nic@CD177	transcript6329.chr19.nic	protein_coding	43355105,43355992	43355783,43357896	Gene ID= ENSG00000204936.9 TPM= 2.34 Transcript Type= NA
chr19	43506719	43527212	43506719	43527212	-	transcript6332.chr19.nic@ETHE1	transcript6332.chr19.nic	protein_coding	43526937,43526515,43526201,43511437,43508775,43507944,43506719	43527212,43526659,43526349,43511566,43508864,43508060,43506902	Gene ID= ENSG00000105755.7 TPM= 5.84 Transcript Type= NA
chr19	43506719	43527244	43506719	43527244	-	ENST00000292147.6@ETHE1	ENST00000292147.6	protein_coding	43527097,43526515,43526201,43511437,43508775,43507944,43506719	43527244,43526659,43526349,43511566,43508864,43508060,43506902	Gene ID= ENSG00000105755.7 TPM= 30.36 Transcript Type= protein_coding
chr19	43543040	43576006	43543040	43576006	-	ENST00000262887.9@XRCC1	ENST00000262887.9	protein_coding	43575408,43574910,43560910,43554646,43553609,43553401,43552982,43552797,43552017,43551571,43546884,43546595,43546052,43545818,43544144,43543612,43543040	43576006,43575002,43561020,43554804,43553683,43553512,43553091,43552908,43552275,43551687,43546977,43546727,43546106,43545957,43544234,43543687,43543505	Gene ID= ENSG00000073050.11 TPM= 29.19 Transcript Type= protein_coding
chr19	43580638	43582098	43580638	43582098	+	ENST00000569031.6@PINLYP	ENST00000569031.6	protein_coding	43580638,43581212,43581563,43581868	43580669,43581364,43581703,43582098	Gene ID= ENSG00000234465.10 TPM= 1.17 Transcript Type= protein_coding
chr19	43584369	43596135	43584369	43596135	-	ENST00000422989.5@IRGQ	ENST00000422989.5	protein_coding	43595982,43594809,43584369	43596135,43595340,43593367	Gene ID= ENSG00000167378.8 TPM= 93.41 Transcript Type= protein_coding
chr19	43585936	43589687	43585936	43589687	-	ENST00000596409.1@IRGQ	ENST00000596409.1	protein_coding	43585936	43589687	Gene ID= ENSG00000167378.8 TPM= 5.84 Transcript Type= retained_intron
chr19	43596575	43599525	43596575	43599525	+	ENST00000528387.5@ZNF576	ENST00000528387.5	protein_coding	43596575,43597094,43598831	43596638,43597193,43599525	Gene ID= ENSG00000124444.15 TPM= 1.17 Transcript Type= protein_coding
chr19	43596605	43601157	43596605	43601157	+	ENST00000336564.4@ZNF576	ENST00000336564.4	protein_coding	43596605,43597094,43598831	43596743,43597193,43601157	Gene ID= ENSG00000124444.15 TPM= 3.5 Transcript Type= protein_coding
chr19	43596595	43599414	43596595	43599414	+	ENST00000529930.1@ZNF576	ENST00000529930.1	protein_coding	43596595,43597097,43598831	43596743,43597193,43599414	Gene ID= ENSG00000124444.15 TPM= 8.17 Transcript Type= protein_coding
chr19	43607219	43619874	43607219	43619874	-	ENST00000300811.7@ZNF428	ENST00000300811.7	protein_coding	43619558,43614229,43607219	43619874,43614434,43608107	Gene ID= ENSG00000131116.11 TPM= 38.53 Transcript Type= protein_coding
chr19	43624836	43639850	43624836	43639850	-	transcript6353.chr19.nic@CADM4	transcript6353.chr19.nic	protein_coding	43639727,43627644,43627166,43626784,43626124,43625911,43625078,43624836	43639850,43627790,43627318,43626918,43626288,43626001,43625250,43624903	Gene ID= ENSG00000105767.2 TPM= 2.34 Transcript Type= NA
chr19	43622368	43639839	43622368	43639839	-	ENST00000222374.2@CADM4	ENST00000222374.2	protein_coding	43639727,43627644,43627166,43626784,43626124,43625911,43625078,43624114,43622368	43639839,43627790,43627318,43626918,43626288,43626001,43625250,43624242,43623439	Gene ID= ENSG00000105767.2 TPM= 2.34 Transcript Type= protein_coding
chr19	43648580	43670350	43648580	43670350	-	ENST00000340093.7@PLAUR	ENST00000340093.7	protein_coding	43670066,43667581,43665316,43656479,43655439,43652225,43648580	43670350,43667691,43665459,43656640,43655573,43652371,43649143	Gene ID= ENSG00000011422.11 TPM= 166.58 Transcript Type= protein_coding
chr19	43648580	43670547	43648580	43670547	-	ENST00000221264.8@PLAUR	ENST00000221264.8	protein_coding	43670066,43667581,43665316,43656479,43652225,43648580	43670547,43667691,43665459,43656640,43652371,43649143	Gene ID= ENSG00000011422.11 TPM= 7.79 Transcript Type= protein_coding
chr19	43646095	43670166	43646095	43670166	-	ENST00000339082.7@PLAUR	ENST00000339082.7	protein_coding	43670066,43667581,43665316,43656479,43655439,43652225,43646095	43670166,43667691,43665459,43656640,43655573,43652371,43646548	Gene ID= ENSG00000011422.11 TPM= 15.18 Transcript Type= protein_coding
chr19	43648579	43670153	43648579	43670153	-	ENST00000601723.5@PLAUR	ENST00000601723.5	protein_coding	43670066,43667581,43665316,43656479,43655439,43648579	43670153,43667691,43665459,43656640,43655573,43649143	Gene ID= ENSG00000011422.11 TPM= 4.29 Transcript Type= protein_coding
chr19	43731310	43735639	43731310	43735639	+	transcript6372.chr19.nnic@NA	transcript6372.chr19.nnic	NA	43731310,43734393	43733739,43735639	Gene ID= novel_gene_chr19_6373 TPM= 2.34 Transcript Type= NA
chr19	43747906	43752914	43747906	43752914	+	transcript6375.chr19.nnic@NA	transcript6375.chr19.nnic	NA	43747906	43752914	Gene ID= novel_gene_chr19_6376 TPM= 3.5 Transcript Type= NA
chr19	43766533	43780987	43766533	43780987	-	transcript6379.chr19.nnic@KCNN4	transcript6379.chr19.nnic	protein_coding	43780703,43774192,43772000,43769719,43769442,43768963,43767540,43766533	43780987,43774619,43772135,43769829,43769560,43769032,43767707,43767089	Gene ID= ENSG00000104783.11 TPM= 2.34 Transcript Type= NA
chr19	43766533	43781257	43766533	43781257	-	ENST00000262888.7@KCNN4	ENST00000262888.7	protein_coding	43780703,43776541,43774192,43772000,43769719,43769442,43768963,43767540,43766533	43781257,43776636,43774619,43772135,43769829,43769560,43769032,43767707,43767089	Gene ID= ENSG00000104783.11 TPM= 16.35 Transcript Type= protein_coding
chr19	43872367	43901809	43872367	43901809	-	transcript6392.chr19.nnic@ZNF404	transcript6392.chr19.nnic	protein_coding	43901037,43900868,43883956,43881622,43880593,43880010,43872367	43901809,43900954,43884051,43881792,43880674,43880136,43874077	Gene ID= ENSG00000176222.8 TPM= 2.92 Transcript Type= NA
chr19	43872367	43901809	43872367	43901809	-	transcript6393.chr19.nic@ZNF404	transcript6393.chr19.nic	protein_coding	43901037,43900868,43883956,43880010,43872367	43901809,43900954,43884051,43880136,43874077	Gene ID= ENSG00000176222.8 TPM= 2.92 Transcript Type= NA
chr19	43912631	43935282	43912631	43935282	-	transcript6398.chr19.nnic@ZNF45	transcript6398.chr19.nnic	protein_coding	43934924,43934426,43932604,43931247,43929918,43925325,43924402,43924238,43922171,43919573,43918870,43912631	43935282,43934694,43932690,43931365,43930000,43925458,43924561,43924310,43922217,43919699,43918962,43915200	Gene ID= ENSG00000124459.11 TPM= 4.29 Transcript Type= NA
chr19	43912631	43935282	43912631	43935282	-	transcript6407.chr19.nic@ZNF45	transcript6407.chr19.nic	protein_coding	43935230,43934426,43932604,43925325,43924402,43924238,43922171,43919573,43918870,43912631	43935282,43934694,43932690,43925458,43924561,43924310,43922217,43919699,43918962,43915200	Gene ID= ENSG00000124459.11 TPM= 4.29 Transcript Type= NA
chr19	43912629	43935259	43912629	43935259	-	ENST00000269973.9@ZNF45	ENST00000269973.9	protein_coding	43934924,43934426,43932604,43925325,43924402,43924238,43922171,43919573,43918870,43912629	43935259,43934694,43932690,43925458,43924561,43924310,43922217,43919699,43918962,43915200	Gene ID= ENSG00000124459.11 TPM= 4.29 Transcript Type= protein_coding
chr19	43984170	43998325	43984170	43998325	+	ENST00000611002.4@ZNF155	ENST00000611002.4	protein_coding	43984170,43988459,43991548,43991842,43996093	43984348,43988558,43991674,43991934,43998325	Gene ID= ENSG00000204920.10 TPM= 1.17 Transcript Type= protein_coding
chr19	43984203	43998325	43984203	43998325	+	ENST00000270014.6@ZNF155	ENST00000270014.6	protein_coding	43984203,43988459,43991548,43991842,43996093	43984245,43988558,43991674,43991934,43998325	Gene ID= ENSG00000204920.10 TPM= 2.34 Transcript Type= protein_coding
chr19	43996896	44002836	43996896	44002836	-	ENST00000586860.1@AC006213.1	ENST00000586860.1	antisense_RNA	44002624,43996896	44002836,43999232	Gene ID= ENSG00000266921.1 TPM= 1.17 Transcript Type= antisense_RNA
chr19	44002948	44013926	44002948	44013926	+	ENST00000429154.6@ZNF230	ENST00000429154.6	protein_coding	44002948,44007011,44008790,44009084,44010269	44003107,44007093,44008916,44009170,44013926	Gene ID= ENSG00000159882.12 TPM= 3.5 Transcript Type= protein_coding
chr19	44002959	44004752	44002959	44004752	+	ENST00000589275.1@ZNF230	ENST00000589275.1	protein_coding	44002959	44004752	Gene ID= ENSG00000159882.12 TPM= 1.17 Transcript Type= retained_intron
chr19	44025400	44033112	44025400	44033112	+	ENST00000391960.3@ZNF222	ENST00000391960.3	protein_coding	44025400,44027023,44027398,44031817	44025478,44027149,44027490,44033112	Gene ID= ENSG00000159885.13 TPM= 3.5 Transcript Type= protein_coding
chr19	44029188	44030217	44029188	44030217	-	transcript6423.chr19.nnic@NA	transcript6423.chr19.nnic	NA	44029188	44030217	Gene ID= novel_gene_chr19_6424 TPM= 4.67 Transcript Type= NA
chr19	44052029	44067418	44052029	44067418	+	transcript6426.chr19.nnic@ZNF223	transcript6426.chr19.nnic	protein_coding	44052029,44055109,44060455,44060749,44061845,44066064	44052195,44055191,44060581,44060841,44063566,44067418	Gene ID= ENSG00000178386.12 TPM= 2.34 Transcript Type= NA
chr19	44052029	44070058	44052029	44070058	+	transcript6427.chr19.nnic@ZNF223	transcript6427.chr19.nnic	protein_coding	44052029,44055109,44060455,44060749,44066064,44069111	44052195,44055191,44060581,44060841,44068734,44070058	Gene ID= ENSG00000178386.12 TPM= 2.34 Transcript Type= NA
chr19	44052009	44067991	44052009	44067991	+	ENST00000434772.7@ZNF223	ENST00000434772.7	protein_coding	44052009,44055109,44060455,44060749,44066064	44052195,44055191,44060581,44060841,44067991	Gene ID= ENSG00000178386.12 TPM= 1.17 Transcript Type= protein_coding
chr19	44072144	44089613	44072144	44089613	+	ENST00000421176.3@ZNF284	ENST00000421176.3	protein_coding	44072144,44076322,44081015,44082013,44085714	44072291,44076404,44081141,44082105,44089613	Gene ID= ENSG00000186026.6 TPM= 7.01 Transcript Type= protein_coding
chr19	44094361	44109826	44094361	44109826	+	transcript6434.chr19.nic@ZNF224	transcript6434.chr19.nic	protein_coding	44094361,44096343,44097806,44100801,44101133,44106396	44094530,44096431,44097888,44100927,44101225,44109826	Gene ID= ENSG00000267680.5 TPM= 9.34 Transcript Type= NA
chr19	44094362	44109826	44094362	44109826	+	transcript6436.chr19.nic@ZNF224	transcript6436.chr19.nic	protein_coding	44094362,44097806,44100801,44101133,44106396	44096431,44097888,44100927,44101225,44109826	Gene ID= ENSG00000267680.5 TPM= 4.67 Transcript Type= NA
chr19	44113358	44134816	44113358	44134816	+	ENST00000262894.10@ZNF225	ENST00000262894.10	protein_coding	44113358,44115760,44118188,44118482,44130850	44113569,44115842,44118314,44118574,44134816	Gene ID= ENSG00000256294.7 TPM= 2.34 Transcript Type= protein_coding
chr19	44141606	44160309	44141606	44160309	+	ENST00000426739.6@ZNF234	ENST00000426739.6	protein_coding	44141606,44142314,44144557,44148771,44150413,44156252	44141733,44142367,44144647,44148897,44150505,44160309	Gene ID= ENSG00000263002.7 TPM= 3.5 Transcript Type= protein_coding
chr19	44165096	44177683	44165096	44177683	+	ENST00000337433.9@ZNF226	ENST00000337433.9	protein_coding	44165096,44165757,44170035,44172088,44172860,44175498	44165142,44165807,44170095,44172214,44172952,44177683	Gene ID= ENSG00000167380.16 TPM= 5.84 Transcript Type= protein_coding
chr19	44165101	44178381	44165101	44178381	+	ENST00000588883.5@ZNF226	ENST00000588883.5	protein_coding	44165101,44165588,44170035,44172088,44172860	44165142,44165807,44170095,44172214,44178381	Gene ID= ENSG00000167380.16 TPM= 1.17 Transcript Type= protein_coding
chr19	44165107	44175712	44165107	44175712	+	ENST00000585678.5@ZNF226	ENST00000585678.5	protein_coding	44165107,44165757,44170035,44172092,44172860,44175498	44165142,44165807,44170095,44172214,44172952,44175712	Gene ID= ENSG00000167380.16 TPM= 1.17 Transcript Type= protein_coding
chr19	44212528	44237267	44212528	44237267	+	ENST00000621083.4@ZNF227	ENST00000621083.4	protein_coding	44212528,44213087,44217791,44228446,44229733,44234702	44212585,44213244,44217852,44228572,44229816,44237267	Gene ID= ENSG00000131115.15 TPM= 5.84 Transcript Type= protein_coding
chr19	44212538	44237268	44212538	44237268	+	ENST00000313040.11@ZNF227	ENST00000313040.11	protein_coding	44212538,44213090,44217791,44228446,44229733,44234702	44212585,44213244,44217852,44228572,44229816,44237268	Gene ID= ENSG00000131115.15 TPM= 2.34 Transcript Type= protein_coding
chr19	44212528	44237267	44212528	44237267	+	ENST00000391961.6@ZNF227	ENST00000391961.6	protein_coding	44212528,44213087,44228446,44229733,44234702	44212585,44213244,44228572,44229816,44237267	Gene ID= ENSG00000131115.15 TPM= 1.17 Transcript Type= protein_coding
chr19	44286350	44305025	44286350	44305025	-	ENST00000291182.8@ZNF235	ENST00000291182.8	protein_coding	44304971,44303390,44299606,44298808,44286350	44305025,44303452,44299732,44298903,44289196	Gene ID= ENSG00000159917.15 TPM= 8.17 Transcript Type= protein_coding
chr19	44326555	44356674	44326555	44356674	-	ENST00000354340.8@ZNF112	ENST00000354340.8	protein_coding	44356626,44340416,44336623,44326555	44356674,44340542,44336718,44329936	Gene ID= ENSG00000062370.16 TPM= 3.5 Transcript Type= protein_coding
chr19	44475644	44500523	44475644	44500523	-	ENST00000592529.5@ZNF180	ENST00000592529.5	protein_coding	44500275,44497284,44484361,44479283,44475644	44500523,44497377,44484435,44479409,44478146	Gene ID= ENSG00000167384.10 TPM= 2.34 Transcript Type= protein_coding
chr19	44475639	44500524	44475639	44500524	-	ENST00000590088.5@ZNF180	ENST00000590088.5	protein_coding	44500198,44497284,44484361,44479283,44475639	44500524,44497377,44484435,44479409,44478146	Gene ID= ENSG00000167384.10 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr19	44643798	44663583	44643798	44663583	+	ENST00000425690.7@PVR	ENST00000425690.7	protein_coding	44643798,44647223,44649809,44653900,44657762,44658742,44661292,44661740	44644175,44647570,44650105,44654017,44657910,44658900,44661323,44663583	Gene ID= ENSG00000073008.14 TPM= 72.78 Transcript Type= protein_coding
chr19	44643798	44663583	44643798	44663583	+	ENST00000344956.8@PVR	ENST00000344956.8	protein_coding	44643798,44647223,44649809,44653900,44657762,44661292,44661740	44644175,44647570,44650105,44654017,44657910,44661323,44663583	Gene ID= ENSG00000073008.14 TPM= 29.58 Transcript Type= protein_coding
chr19	44655864	44660507	44655864	44660507	+	transcript6492.chr19.nnic@PVR	transcript6492.chr19.nnic	protein_coding	44655864,44656864,44658742	44656000,44657910,44660507	Gene ID= ENSG00000073008.14 TPM= 2.92 Transcript Type= NA
chr19	44655864	44660507	44655864	44660507	+	transcript6493.chr19.nic@PVR	transcript6493.chr19.nic	protein_coding	44655864,44658742	44657910,44660507	Gene ID= ENSG00000073008.14 TPM= 19.27 Transcript Type= NA
chr19	44643910	44663583	44643910	44663583	+	ENST00000403059.8@PVR	ENST00000403059.8	protein_coding	44643910,44647223,44649809,44653900,44657762,44658742,44661292,44661740	44644175,44647570,44650105,44654017,44657910,44658765,44661323,44663583	Gene ID= ENSG00000073008.14 TPM= 19.07 Transcript Type= protein_coding
chr19	44748547	44760044	44748547	44760044	+	ENST00000164227.9@BCL3	ENST00000164227.9	protein_coding	44748547,44751227,44756232,44757017,44757327,44757646,44758246,44758724,44759428	44749046,44751380,44756340,44757221,44757415,44757723,44758413,44758841,44760044	Gene ID= ENSG00000069399.14 TPM= 156.46 Transcript Type= protein_coding
chr19	44777869	44800634	44777869	44800634	+	ENST00000270279.7@CBLC	ENST00000270279.7	protein_coding	44777869,44780905,44781207,44782370,44784264,44790004,44792383,44793474,44794204,44800381,44800551	44778284,44781051,44781363,44782491,44784401,44790091,44792514,44793620,44794281,44800450,44800634	Gene ID= ENSG00000142273.10 TPM= 1.17 Transcript Type= protein_coding
chr19	44809103	44821414	44809103	44821414	+	ENST00000270233.10@BCAM	ENST00000270233.10	protein_coding	44809103,44811225,44812163,44812478,44813250,44813438,44814152,44814604,44818522,44818741,44819056,44819346,44819582,44820705,44820916	44809206,44811346,44812391,44812548,44813346,44813620,44814288,44814760,44818637,44818882,44819192,44819490,44819726,44820822,44821414	Gene ID= ENSG00000187244.10 TPM= 169.3 Transcript Type= protein_coding
chr19	44846290	44878938	44846290	44878938	+	transcript6535.chr19.nic@NECTIN2	transcript6535.chr19.nic	protein_coding	44846290,44865271,44871853,44873916,44874330,44878553	44846613,44865660,44872149,44874033,44874478,44878938	Gene ID= ENSG00000130202.9 TPM= 20.14 Transcript Type= NA
chr19	44846526	44889228	44846526	44889228	+	ENST00000252483.9@NECTIN2	ENST00000252483.9	protein_coding	44846526,44865271,44871853,44873916,44874330,44882211,44885937,44886133,44888110	44846613,44865660,44872149,44874033,44874478,44882364,44886000,44886219,44889228	Gene ID= ENSG00000130202.9 TPM= 21.31 Transcript Type= protein_coding
chr19	44875270	44877382	44875270	44877382	-	transcript6542.chr19.nnic@NA	transcript6542.chr19.nnic	NA	44875270	44877382	Gene ID= novel_gene_chr19_6543 TPM= 4.67 Transcript Type= NA
chr19	44891220	44903688	44891220	44903688	+	ENST00000405636.6@TOMM40	ENST00000405636.6	protein_coding	44891220,44891407,44892393,44892837,44893780,44893961,44900730,44901028,44901208,44903030	44891314,44891689,44892460,44892929,44893881,44894066,44900852,44901104,44901310,44903688	Gene ID= ENSG00000130204.12 TPM= 166.97 Transcript Type= protein_coding
chr19	44891236	44903628	44891236	44903628	+	ENST00000426677.6@TOMM40	ENST00000426677.6	protein_coding	44891236,44892393,44892837,44893780,44893961,44900730,44901028,44901208,44903030	44891689,44892460,44892929,44893881,44894066,44900852,44901104,44901310,44903628	Gene ID= ENSG00000130204.12 TPM= 26.85 Transcript Type= protein_coding
chr19	44891231	44903686	44891231	44903686	+	ENST00000592434.5@TOMM40	ENST00000592434.5	protein_coding	44891231,44891407,44892393,44892837,44893780,44893961,44900730,44901028,44901208	44891314,44891689,44892460,44892929,44893881,44894066,44900852,44901104,44903686	Gene ID= ENSG00000130204.12 TPM= 1.17 Transcript Type= protein_coding
chr19	44905754	44909393	44905754	44909393	+	ENST00000252486.8@APOE	ENST00000252486.8	protein_coding	44905754,44906602,44907760,44908533	44905841,44906667,44907952,44909393	Gene ID= ENSG00000130203.9 TPM= 872.78 Transcript Type= protein_coding
chr19	44914247	44919342	44914247	44919342	+	ENST00000588750.5@APOC1	ENST00000588750.5	protein_coding	44914247,44914672,44914872,44916190,44919173	44914489,44914733,44914949,44916325,44919342	Gene ID= ENSG00000130208.9 TPM= 140.11 Transcript Type= protein_coding
chr19	44914753	44919346	44914753	44919346	+	transcript6570.chr19.nic@APOC1	transcript6570.chr19.nic	protein_coding	44914753,44916190,44919173	44914949,44916325,44919346	Gene ID= ENSG00000130208.9 TPM= 11.68 Transcript Type= NA
chr19	44914325	44919346	44914325	44919346	+	ENST00000588802.5@APOC1	ENST00000588802.5	protein_coding	44914325,44914872,44916190,44919173	44914489,44914949,44916325,44919346	Gene ID= ENSG00000130208.9 TPM= 8.17 Transcript Type= protein_coding
chr19	44914710	44919343	44914710	44919343	+	ENST00000589781.1@APOC1	ENST00000589781.1	protein_coding	44914710,44914872,44919173	44914733,44914949,44919343	Gene ID= ENSG00000130208.9 TPM= 3.5 Transcript Type= protein_coding
chr19	44942238	44949565	44942238	44949565	+	ENST00000585685.5@APOC4-APOC2	ENST00000585685.5	protein_coding	44942238,44944749,44945140,44948466,44948701,44949159	44942353,44944890,44946075,44948533,44948860,44949565	Gene ID= ENSG00000224916.9 TPM= 39.7 Transcript Type= nonsense_mediated_decay
chr19	44955246	44993341	44955246	44993341	+	ENST00000337392.9@CLPTM1	ENST00000337392.9	protein_coding	44955246,44961963,44973087,44974439,44977343,44985218,44986455,44987179,44988080,44990395,44990850,44991238,44992233,44992611	44955467,44962075,44973210,44974597,44977460,44985303,44986575,44987423,44988173,44990585,44990945,44991373,44992400,44993341	Gene ID= ENSG00000104853.15 TPM= 246.95 Transcript Type= protein_coding
chr19	45001430	45038194	45001430	45038194	+	ENST00000221452.12@RELB	ENST00000221452.12	protein_coding	45001430,45002949,45009814,45011936,45022053,45025329,45025606,45028888,45032534,45034244,45034451,45037405	45001685,45002996,45009822,45012276,45022210,45025420,45025737,45028992,45032749,45034312,45034528,45038194	Gene ID= ENSG00000104856.13 TPM= 14.01 Transcript Type= protein_coding
chr19	45001461	45038159	45001461	45038159	+	ENST00000505236.1@RELB	ENST00000505236.1	protein_coding	45001461,45002949,45011936,45022053,45025329,45025606,45028888,45032534,45034244,45034451,45037405	45001685,45002996,45012276,45022210,45025420,45025737,45028992,45032749,45034312,45034528,45038159	Gene ID= ENSG00000104856.13 TPM= 11.68 Transcript Type= protein_coding
chr19	45039040	45070956	45039040	45070956	+	ENST00000221455.7@CLASRP	ENST00000221455.7	protein_coding	45039040,45040184,45052071,45052791,45053098,45056450,45057750,45059268,45060389,45060554,45062154,45064012,45064343,45067337,45068015,45068420,45069066,45069202,45070022,45070537,45070803	45039108,45040311,45052168,45052892,45053177,45056534,45057898,45059364,45060467,45060627,45062195,45064227,45064630,45067594,45068054,45068480,45069124,45069248,45070104,45070561,45070956	Gene ID= ENSG00000104859.14 TPM= 16.64 Transcript Type= protein_coding
chr19	45039042	45070956	45039042	45070956	+	transcript6584.chr19.nic@CLASRP	transcript6584.chr19.nic	protein_coding	45039042,45040184,45052071,45052791,45053098,45056450,45057750,45059268,45060389,45060554,45062154,45064012,45064343,45067337,45068015,45068420,45069066,45070022,45070537,45070803	45039108,45040311,45052168,45052892,45053177,45056534,45057898,45059364,45060467,45060627,45062195,45064227,45064630,45067594,45068058,45068480,45069248,45070104,45070561,45070956	Gene ID= ENSG00000104859.14 TPM= 2.63 Transcript Type= NA
chr19	45039042	45070956	45039042	45070956	+	transcript6587.chr19.nic@CLASRP	transcript6587.chr19.nic	protein_coding	45039042,45040184,45052071,45052791,45053098,45056450,45057750,45059268,45060389,45060554,45062154,45064012,45067337,45068015,45068420,45069066,45069202,45070022,45070537,45070803	45039108,45040311,45052168,45052892,45053177,45056534,45057898,45059364,45060467,45060627,45062195,45064630,45067594,45068058,45068480,45069124,45069248,45070104,45070561,45070956	Gene ID= ENSG00000104859.14 TPM= 3.79 Transcript Type= NA
chr19	45039042	45065411	45039042	45065411	+	transcript6594.chr19.nic@CLASRP	transcript6594.chr19.nic	protein_coding	45039042,45040184,45052071,45052791,45053098,45056450,45057750,45059268,45060389,45060554,45062154,45064012	45039108,45040311,45052168,45052892,45053177,45056534,45057898,45059364,45060467,45060627,45062195,45065411	Gene ID= ENSG00000104859.14 TPM= 4.67 Transcript Type= NA
chr19	45039065	45070956	45039065	45070956	+	ENST00000391952.7@CLASRP	ENST00000391952.7	protein_coding	45039065,45040184,45052071,45052791,45053098,45056450,45057750,45059268,45060389,45060554,45062154,45064012,45064343,45067337,45068015,45068420,45069066,45069202,45070022,45070537,45070803	45039108,45040311,45052168,45052892,45053177,45056534,45057898,45059364,45060467,45060627,45062195,45064227,45064630,45067594,45068058,45068480,45069124,45069248,45070104,45070561,45070956	Gene ID= ENSG00000104859.14 TPM= 22.48 Transcript Type= nonsense_mediated_decay
chr19	45071500	45076588	45071500	45076588	-	ENST00000303809.6@ZNF296	ENST00000303809.6	protein_coding	45076076,45075713,45071500	45076588,45075862,45072580	Gene ID= ENSG00000170684.8 TPM= 2.34 Transcript Type= protein_coding
chr19	45079262	45091524	45079262	45091524	+	ENST00000270257.8@GEMIN7	ENST00000270257.8	protein_coding	45079262,45079907,45090107	45079377,45080029,45091524	Gene ID= ENSG00000142252.10 TPM= 2.34 Transcript Type= protein_coding
chr19	45079195	45090869	45079195	45090869	+	ENST00000591607.1@GEMIN7	ENST00000591607.1	protein_coding	45079195,45090107	45079279,45090869	Gene ID= ENSG00000142252.10 TPM= 4.67 Transcript Type= protein_coding
chr19	45078098	45090918	45078098	45090918	+	transcript6604.chr19.nic@GEMIN7	transcript6604.chr19.nic	protein_coding	45078098,45090107	45080029,45090918	Gene ID= ENSG00000142252.10 TPM= 2.34 Transcript Type= NA
chr19	45092962	45147285	45092962	45147285	+	ENST00000221462.8@PPP1R37	ENST00000221462.8	protein_coding	45092962,45138514,45140236,45140506,45141322,45142061,45142303,45143521,45144854,45145094,45145353,45146390,45146571	45093527,45138611,45140281,45140606,45141441,45142211,45142458,45143633,45144995,45145260,45146049,45146480,45147285	Gene ID= ENSG00000104866.10 TPM= 19.85 Transcript Type= protein_coding
chr19	45120016	45122850	45120016	45122850	-	transcript6616.chr19.nnic@NA	transcript6616.chr19.nnic	NA	45120016	45122850	Gene ID= novel_gene_chr19_6617 TPM= 2.34 Transcript Type= NA
chr19	45162928	45178237	45162928	45178237	-	ENST00000006275.8@TRAPPC6A	ENST00000006275.8	protein_coding	45178093,45165127,45164853,45164164,45163916,45162928	45178237,45165194,45164970,45164247,45164009,45163223	Gene ID= ENSG00000007255.10 TPM= 4.87 Transcript Type= protein_coding
chr19	45162933	45178237	45162933	45178237	-	ENST00000585934.1@TRAPPC6A	ENST00000585934.1	protein_coding	45178135,45165127,45164853,45164164,45163916,45162933	45178237,45165194,45164970,45164247,45164009,45163223	Gene ID= ENSG00000007255.10 TPM= 4.87 Transcript Type= protein_coding
chr19	45162928	45178237	45162928	45178237	-	ENST00000588062.5@TRAPPC6A	ENST00000588062.5	protein_coding	45178135,45164853,45164164,45163916,45162928	45178237,45164970,45164247,45164009,45163223	Gene ID= ENSG00000007255.10 TPM= 1.95 Transcript Type= protein_coding
chr19	45178773	45181795	45178773	45181795	+	transcript6624.chr19.nnic@NA	transcript6624.chr19.nnic	NA	45178773	45181795	Gene ID= novel_gene_chr19_6625 TPM= 53.71 Transcript Type= NA
chr19	45212621	45245431	45212621	45245431	-	ENST00000413988.2@EXOC3L2	ENST00000413988.2	protein_coding	45245341,45238523,45234193,45231763,45228165,45227974,45227662,45224778,45218197,45217528,45216073,45212621	45245431,45239061,45234826,45231874,45228266,45228074,45227772,45224913,45218319,45217683,45216194,45213357	Gene ID= ENSG00000283632.2 TPM= 26.85 Transcript Type= protein_coding
chr19	45251258	45303693	45251258	45303693	+	ENST00000262891.8@MARK4	ENST00000262891.8	protein_coding	45251258,45258989,45263113,45263319,45264684,45264840,45266225,45271472,45277923,45278516,45280374,45280575,45287447,45294349,45297676,45299811,45302374	45251639,45259189,45263166,45263367,45264749,45264910,45266281,45271708,45278042,45278615,45280483,45280734,45287664,45294452,45297954,45299855,45303693	Gene ID= ENSG00000007047.14 TPM= 19.85 Transcript Type= protein_coding
chr19	45251292	45305283	45251292	45305283	+	ENST00000300843.8@MARK4	ENST00000300843.8	protein_coding	45251292,45258989,45263113,45263319,45264684,45264840,45266225,45271472,45277923,45278516,45280374,45280575,45287447,45294349,45297676,45298143,45299811,45302374	45251639,45259189,45263166,45263367,45264749,45264910,45266281,45271708,45278042,45278615,45280483,45280734,45287664,45294452,45297954,45298222,45299855,45305283	Gene ID= ENSG00000007047.14 TPM= 1.17 Transcript Type= protein_coding
chr19	45340753	45351520	45340753	45351520	+	ENST00000391946.6@KLC3	ENST00000391946.6	protein_coding	45340753,45345534,45346544,45347447,45347941,45348646,45348820,45349429,45350341,45350514,45350641,45350954,45351286	45340846,45345799,45346774,45347516,45348160,45348733,45348921,45349602,45350431,45350551,45350747,45351017,45351520	Gene ID= ENSG00000104892.16 TPM= 9.34 Transcript Type= protein_coding
chr19	45349837	45370618	45349837	45370618	-	ENST00000391945.8@ERCC2	ENST00000391945.8	protein_coding	45370536,45370133,45369070,45368930,45368630,45365042,45364838,45364424,45364235,45363986,45363743,45361524,45357630,45357474,45357270,45355665,45354730,45353242,45353083,45352746,45352506,45352209,45349837	45370618,45370232,45369147,45368992,45368743,45365158,45364954,45364547,45364331,45364119,45363911,45361642,45357699,45357543,45357371,45355728,45354851,45353334,45353155,45352816,45352649,45352352,45351721	Gene ID= ENSG00000104884.14 TPM= 2.34 Transcript Type= protein_coding
chr19	45379638	45395728	45379638	45395728	-	transcript6657.chr19.nnic@PPP1R13L	transcript6657.chr19.nnic	protein_coding	45395436,45392906,45391880,45386049,45385824,45385562,45382527,45379638	45395728,45393001,45392340,45386180,45385957,45385728,45382726,45380228	Gene ID= ENSG00000104881.15 TPM= 16.54 Transcript Type= NA
chr19	45379638	45393167	45379638	45393167	-	ENST00000587270.5@PPP1R13L	ENST00000587270.5	protein_coding	45391880,45386049,45385824,45385562,45382527,45379638	45393167,45386180,45385957,45385728,45382726,45380228	Gene ID= ENSG00000104881.15 TPM= 27.05 Transcript Type= retained_intron
chr19	45379634	45405038	45379634	45405038	-	ENST00000360957.9@PPP1R13L	ENST00000360957.9	protein_coding	45404999,45398264,45398005,45396545,45396338,45396168,45395436,45391880,45386049,45385824,45385562,45382527,45379634	45405038,45398339,45398147,45397058,45396436,45396259,45395886,45392340,45386180,45385957,45385728,45382726,45380228	Gene ID= ENSG00000104881.15 TPM= 25.3 Transcript Type= protein_coding
chr19	45406209	45410766	45406209	45410766	+	ENST00000309424.7@CD3EAP	ENST00000309424.7	protein_coding	45406209,45407094,45408133	45406718,45407235,45410766	Gene ID= ENSG00000117877.10 TPM= 18.68 Transcript Type= protein_coding
chr19	45406691	45409786	45406691	45409786	+	ENST00000589804.1@CD3EAP	ENST00000589804.1	protein_coding	45406691,45407094,45408133	45406724,45407235,45409786	Gene ID= ENSG00000117877.10 TPM= 2.34 Transcript Type= protein_coding
chr19	45407333	45424365	45407333	45424365	-	ENST00000300853.7@ERCC1	ENST00000300853.7	protein_coding	45423781,45423270,45421178,45420324,45419098,45416821,45414861,45413963,45413677,45407333	45424365,45423381,45421393,45420427,45419197,45416897,45414960,45414034,45413745,45409725	Gene ID= ENSG00000012061.15 TPM= 30.36 Transcript Type= protein_coding
chr19	45409616	45423530	45409616	45423530	-	transcript6650.chr19.nic@ERCC1	transcript6650.chr19.nic	protein_coding	45423270,45421178,45420324,45419098,45416821,45414861,45413963,45413677,45409616	45423530,45421393,45420427,45419197,45416897,45414960,45414034,45413745,45409725	Gene ID= ENSG00000012061.15 TPM= 10.51 Transcript Type= NA
chr19	45409616	45423905	45409616	45423905	-	transcript6653.chr19.nic@ERCC1	transcript6653.chr19.nic	protein_coding	45423823,45423270,45421178,45420324,45419098,45416821,45414861,45413677,45409616	45423905,45423381,45421393,45420427,45419197,45416897,45414960,45413745,45409725	Gene ID= ENSG00000012061.15 TPM= 2.34 Transcript Type= NA
chr19	45413436	45423922	45413436	45423922	-	transcript6655.chr19.nic@ERCC1	transcript6655.chr19.nic	protein_coding	45423781,45423270,45421178,45420324,45419098,45416821,45414861,45413963,45413436	45423922,45423381,45421393,45420427,45419197,45416897,45414960,45414034,45413745	Gene ID= ENSG00000012061.15 TPM= 7.59 Transcript Type= NA
chr19	45413434	45423566	45413434	45423566	-	ENST00000013807.9@ERCC1	ENST00000013807.9	protein_coding	45423270,45421178,45420324,45419098,45416821,45414861,45413963,45413434	45423566,45421393,45420427,45419197,45416897,45414960,45414034,45413745	Gene ID= ENSG00000012061.15 TPM= 1.75 Transcript Type= protein_coding
chr19	45409614	45423839	45409614	45423839	-	ENST00000340192.11@ERCC1	ENST00000340192.11	protein_coding	45423781,45423270,45421178,45420324,45419098,45416821,45414861,45413677,45409614	45423839,45423381,45421393,45420427,45419197,45416897,45414960,45413745,45409725	Gene ID= ENSG00000012061.15 TPM= 1.17 Transcript Type= protein_coding
chr19	45485289	45497061	45485289	45497061	-	ENST00000245923.8@RTN2	ENST00000245923.8	protein_coding	45496792,45495095,45494526,45494166,45493160,45489346,45488848,45488637,45488471,45486055,45485289	45497061,45495139,45495005,45494420,45493378,45489553,45488986,45488706,45488517,45486113,45485789	Gene ID= ENSG00000125744.11 TPM= 3.5 Transcript Type= protein_coding
chr19	45485294	45497055	45485294	45497055	-	ENST00000344680.8@RTN2	ENST00000344680.8	protein_coding	45496792,45495095,45494526,45494166,45489346,45488848,45488637,45488471,45486055,45485294	45497055,45495139,45495005,45494420,45489553,45488986,45488706,45488517,45486113,45485789	Gene ID= ENSG00000125744.11 TPM= 5.25 Transcript Type= protein_coding
chr19	45485294	45493267	45485294	45493267	-	ENST00000430715.6@RTN2	ENST00000430715.6	protein_coding	45493160,45489346,45488848,45488637,45488471,45486055,45485294	45493267,45489553,45488986,45488706,45488517,45486113,45485789	Gene ID= ENSG00000125744.11 TPM= 4.09 Transcript Type= protein_coding
chr19	45507416	45526983	45507416	45526983	+	ENST00000245932.10@VASP	ENST00000245932.10	protein_coding	45507416,45517663,45517929,45521322,45522168,45522340,45522718,45523644,45523841,45524097,45524570,45525946,45526140	45507776,45517834,45518094,45521406,45522217,45522581,45522818,45523695,45523877,45524142,45524660,45526003,45526983	Gene ID= ENSG00000125753.13 TPM= 256.87 Transcript Type= protein_coding
chr19	45546281	45584819	45546281	45584819	-	ENST00000263275.4@OPA3	ENST00000263275.4	protein_coding	45584623,45546281	45584819,45553911	Gene ID= ENSG00000125741.4 TPM= 9.34 Transcript Type= protein_coding
chr19	45589764	45602208	45589764	45602208	-	ENST00000323040.4@GPR4	ENST00000323040.4	protein_coding	45602095,45589764	45602208,45592697	Gene ID= ENSG00000177464.4 TPM= 47.87 Transcript Type= protein_coding
chr19	45609402	45643727	45609402	45643727	-	ENST00000536630.5@EML2	ENST00000536630.5	protein_coding	45643579,45642134,45641918,45641641,45638845,45638505,45634322,45633070,45632861,45629951,45626705,45624719,45621483,45621207,45619060,45617630,45616765,45616461,45615802,45614605,45613541,45609402	45643727,45642352,45642041,45641748,45638873,45638634,45634471,45633139,45632971,45630046,45626839,45624818,45621637,45621332,45619191,45617697,45616853,45616558,45615889,45614700,45613671,45609788	Gene ID= ENSG00000125746.16 TPM= 8.17 Transcript Type= protein_coding
chr19	45609400	45639427	45609400	45639427	-	ENST00000245925.7@EML2	ENST00000245925.7	protein_coding	45639357,45638845,45638505,45634322,45633070,45632861,45629951,45626705,45624719,45621483,45621207,45619060,45617630,45616765,45616461,45615802,45614605,45613541,45609400	45639427,45638873,45638634,45634471,45633139,45632971,45630046,45626839,45624818,45621637,45621332,45619191,45617697,45616853,45616558,45615889,45614700,45613671,45609788	Gene ID= ENSG00000125746.16 TPM= 31.53 Transcript Type= protein_coding
chr19	45687463	45691941	45687463	45691941	-	ENST00000391932.7@SNRPD2	ENST00000391932.7	protein_coding	45691887,45689233,45688387,45687463	45691941,45689347,45688566,45687727	Gene ID= ENSG00000125743.10 TPM= 13.43 Transcript Type= protein_coding
chr19	45687454	45692333	45687454	45692333	-	ENST00000342669.7@SNRPD2	ENST00000342669.7	protein_coding	45691887,45688387,45687454	45692333,45688566,45687727	Gene ID= ENSG00000125743.10 TPM= 118.51 Transcript Type= protein_coding
chr19	45692483	45703989	45692483	45703989	+	ENST00000012049.9@QPCTL	ENST00000012049.9	protein_coding	45692483,45693413,45695437,45698547,45698801,45701798,45702904	45692910,45693556,45695718,45698699,45698900,45701914,45703989	Gene ID= ENSG00000011478.11 TPM= 5.84 Transcript Type= protein_coding
chr19	45710629	45730904	45710629	45730904	-	ENST00000317683.3@FBXO46	ENST00000317683.3	protein_coding	45730849,45710629	45730904,45713573	Gene ID= ENSG00000177051.5 TPM= 21.02 Transcript Type= protein_coding
chr19	45764784	45768861	45764784	45768861	-	transcript6777.chr19.nnic@NA	transcript6777.chr19.nnic	NA	45764784	45768861	Gene ID= novel_gene_chr19_6778 TPM= 9.92 Transcript Type= NA
chr19	45764785	45769226	45764785	45769226	-	ENST00000317578.6@SIX5	ENST00000317578.6	protein_coding	45768042,45766350,45764785	45769226,45767155,45766111	Gene ID= ENSG00000177045.7 TPM= 12.26 Transcript Type= protein_coding
chr19	45768387	45769806	45768387	45769806	+	ENST00000592217.2@AC074212.1	ENST00000592217.2	processed_transcript	45768387	45769806	Gene ID= ENSG00000259605.3 TPM= 3.5 Transcript Type= retained_intron
chr19	45768991	45772503	45768991	45772503	+	transcript6775.chr19.nnic@NA	transcript6775.chr19.nnic	NA	45768991	45772503	Gene ID= novel_gene_chr19_6776 TPM= 5.84 Transcript Type= NA
chr19	45769717	45782375	45769717	45782375	-	transcript6722.chr19.nic@DMPK	transcript6722.chr19.nic	protein_coding	45782193,45780214,45779778,45779439,45779264,45778493,45778127,45777667,45777327,45774949,45772641,45771771,45771568,45771350,45770971,45769717	45782375,45780381,45779869,45779522,45779359,45778641,45778220,45777873,45777590,45775034,45772752,45771928,45771665,45771396,45771056,45770640	Gene ID= ENSG00000104936.17 TPM= 2.92 Transcript Type= NA
chr19	45769717	45783868	45769717	45783868	-	transcript6726.chr19.nic@DMPK	transcript6726.chr19.nic	protein_coding	45782193,45779778,45779439,45779264,45778493,45778127,45777667,45777327,45774949,45772641,45771771,45771568,45771350,45770971,45769717	45783868,45779869,45779522,45779359,45778641,45778220,45777873,45777590,45775034,45772752,45771928,45771665,45771396,45771056,45770640	Gene ID= ENSG00000104936.17 TPM= 7.59 Transcript Type= NA
chr19	45769717	45780934	45769717	45780934	-	transcript6732.chr19.nic@DMPK	transcript6732.chr19.nic	protein_coding	45779778,45779439,45779264,45778493,45778127,45777667,45777327,45774949,45772641,45771771,45771568,45771350,45770971,45769717	45780934,45779522,45779359,45778641,45778220,45777873,45777590,45775034,45772752,45771928,45771665,45771396,45771056,45770640	Gene ID= ENSG00000104936.17 TPM= 2.92 Transcript Type= NA
chr19	45769717	45782921	45769717	45782921	-	transcript6743.chr19.nic@DMPK	transcript6743.chr19.nic	protein_coding	45782193,45779778,45779439,45779264,45778493,45778127,45777667,45777327,45774949,45772641,45771771,45771568,45769717	45782921,45779869,45779522,45779359,45778641,45778220,45777873,45777590,45775034,45772752,45771928,45771665,45770640	Gene ID= ENSG00000104936.17 TPM= 13.43 Transcript Type= NA
chr19	45769717	45780847	45769717	45780847	-	transcript6747.chr19.nic@DMPK	transcript6747.chr19.nic	protein_coding	45779778,45779439,45779264,45778493,45778127,45777667,45777327,45774949,45772641,45771771,45771568,45769717	45780847,45779522,45779359,45778641,45778220,45777873,45777590,45775034,45772752,45771928,45771665,45770640	Gene ID= ENSG00000104936.17 TPM= 6.42 Transcript Type= NA
chr19	45769717	45782478	45769717	45782478	-	ENST00000291270.8@DMPK	ENST00000291270.8	protein_coding	45782193,45779778,45779439,45779264,45778493,45778127,45777667,45777327,45774949,45772641,45771771,45771568,45771350,45770971,45769717	45782478,45779869,45779522,45779359,45778641,45778220,45777873,45777590,45775034,45772752,45771928,45771665,45771396,45771060,45770640	Gene ID= ENSG00000104936.17 TPM= 24.81 Transcript Type= protein_coding
chr19	45769720	45779619	45769720	45779619	-	ENST00000596686.5@DMPK	ENST00000596686.5	protein_coding	45779439,45779264,45778493,45778127,45777667,45777327,45774949,45772641,45771771,45771568,45771350,45770971,45769720	45779619,45779359,45778641,45778220,45777873,45777590,45775034,45772752,45771928,45771665,45771396,45771056,45770640	Gene ID= ENSG00000104936.17 TPM= 8.47 Transcript Type= retained_intron
chr19	45769736	45782479	45769736	45782479	-	ENST00000447742.6@DMPK	ENST00000447742.6	protein_coding	45782193,45779778,45779439,45779264,45778493,45778127,45777667,45777342,45774949,45772641,45771771,45771568,45771350,45770971,45769736	45782479,45779869,45779522,45779359,45778641,45778220,45777873,45777590,45775034,45772752,45771928,45771665,45771396,45771060,45770640	Gene ID= ENSG00000104936.17 TPM= 4.67 Transcript Type= protein_coding
chr19	45782984	45792835	45782984	45792835	-	transcript6767.chr19.nic@DMWD	transcript6767.chr19.nic	protein_coding	45792316,45790905,45782984	45792835,45791087,45786871	Gene ID= ENSG00000185800.11 TPM= 9.34 Transcript Type= NA
chr19	45782947	45792802	45782947	45792802	-	ENST00000377735.7@DMWD	ENST00000377735.7	protein_coding	45792316,45790905,45785594,45782947	45792802,45791087,45786871,45784290	Gene ID= ENSG00000185800.11 TPM= 8.17 Transcript Type= protein_coding
chr19	45783009	45792802	45783009	45792802	-	ENST00000270223.6@DMWD	ENST00000270223.6	protein_coding	45792316,45790905,45785594,45784641,45783009	45792802,45791087,45786871,45784715,45784290	Gene ID= ENSG00000185800.11 TPM= 29.19 Transcript Type= protein_coding
chr19	45815435	45863290	45815435	45863290	-	ENST00000245934.11@SYMPK	ENST00000245934.11	protein_coding	45863058,45854391,45854175,45852482,45852312,45848750,45847752,45844030,45842250,45838461,45835078,45831384,45830054,45828970,45827837,45827510,45826226,45825171,45823767,45823372,45822756,45821384,45817959,45816798,45816482,45815851,45815435	45863290,45854507,45854240,45852535,45852385,45848876,45848001,45844200,45842489,45838615,45835228,45831588,45830204,45829205,45827918,45827623,45826373,45825331,45823875,45823472,45822846,45821485,45818146,45816974,45816577,45816183,45815697	Gene ID= ENSG00000125755.18 TPM= 54.29 Transcript Type= protein_coding
chr19	45831170	45863132	45831170	45863132	-	ENST00000598896.5@SYMPK	ENST00000598896.5	protein_coding	45863058,45854391,45854175,45852482,45852312,45848750,45847752,45844030,45842250,45838461,45835078,45831170	45863132,45854507,45854240,45852535,45852385,45848876,45848001,45844200,45842489,45838615,45835228,45831588	Gene ID= ENSG00000125755.18 TPM= 4.09 Transcript Type= retained_intron
chr19	45864260	45873797	45864260	45873797	+	ENST00000302177.2@FOXA3	ENST00000302177.2	protein_coding	45864260,45872075	45864525,45873797	Gene ID= ENSG00000170608.2 TPM= 1.17 Transcript Type= protein_coding
chr19	45883607	45886170	45883607	45886170	-	ENST00000302165.4@IRF2BP1	ENST00000302165.4	protein_coding	45883607	45886170	Gene ID= ENSG00000170604.4 TPM= 64.22 Transcript Type= protein_coding
chr19	45890020	45902604	45890020	45902604	-	ENST00000322217.5@MYPOP	ENST00000322217.5	protein_coding	45902570,45901275,45890020	45902604,45901825,45891323	Gene ID= ENSG00000176182.5 TPM= 3.5 Transcript Type= protein_coding
chr19	45936367	45939425	45936367	45939425	-	transcript6796.chr19.nnic@NA	transcript6796.chr19.nnic	NA	45936367	45939425	Gene ID= novel_gene_chr19_6797 TPM= 5.84 Transcript Type= NA
chr19	45995451	46018616	45995451	46018616	+	transcript6798.chr19.nic@CCDC61	transcript6798.chr19.nic	protein_coding	45995451,45996245,46003008,46003419,46006559,46008140,46015049,46015345,46016054,46016318,46016694,46016991,46017247,46018078,46018290	45995504,45996401,46003166,46003501,46006716,46008301,46015259,46015427,46016223,46016393,46016833,46017069,46017304,46018150,46018616	Gene ID= ENSG00000104983.8 TPM= 7.79 Transcript Type= NA
chr19	45995467	46018616	45995467	46018616	+	ENST00000595358.5@CCDC61	ENST00000595358.5	protein_coding	45995467,46003008,46003419,46006559,46008140,46015049,46015345,46016054,46016318,46016694,46016991,46017247,46018078,46018290	45995504,46003166,46003501,46006716,46008301,46015259,46015427,46016223,46016393,46016833,46017069,46017304,46018150,46018616	Gene ID= ENSG00000104983.8 TPM= 17.13 Transcript Type= protein_coding
chr19	46002095	46018616	46002095	46018616	+	transcript6804.chr19.nic@CCDC61	transcript6804.chr19.nic	protein_coding	46002095,46003419,46006559,46008140,46015049,46015345,46016054,46016318,46016694,46016991,46017247,46018078,46018290	46003166,46003501,46006716,46008301,46015259,46015427,46016223,46016393,46016833,46017069,46017304,46018150,46018616	Gene ID= ENSG00000104983.8 TPM= 6.62 Transcript Type= NA
chr19	46020107	46021864	46020107	46021864	-	transcript6808.chr19.nnic@NA	transcript6808.chr19.nnic	NA	46020107	46021864	Gene ID= novel_gene_chr19_6809 TPM= 5.84 Transcript Type= NA
chr19	46298389	46338538	46298389	46338538	+	transcript6812.chr19.nic@HIF3A	transcript6812.chr19.nic	protein_coding	46298389,46303898,46305245,46308221,46308663,46309151,46312161,46312506,46320443,46321776,46325535,46329207,46331156,46334905,46338227	46298514,46304088,46305390,46308305,46308775,46309359,46312267,46312653,46320561,46321966,46325639,46329478,46331273,46334986,46338538	Gene ID= ENSG00000124440.15 TPM= 5.84 Transcript Type= NA
chr19	46346994	46390852	46346994	46390852	+	ENST00000012443.8@PPP5C	ENST00000012443.8	protein_coding	46346994,46353748,46375604,46376453,46383411,46383780,46384804,46387093,46387366,46388408,46388553,46390051,46390284	46347217,46353989,46375751,46376574,46383476,46383878,46384909,46387235,46387453,46388448,46388731,46390132,46390852	Gene ID= ENSG00000011485.14 TPM= 133.49 Transcript Type= protein_coding
chr19	46410372	46413584	46410372	46413584	-	ENST00000307522.3@CCDC8	ENST00000307522.3	protein_coding	46410372	46413584	Gene ID= ENSG00000169515.5 TPM= 12.84 Transcript Type= protein_coding
chr19	46466498	46471563	46466498	46471563	-	ENST00000313683.14@PNMA8A	ENST00000313683.14	protein_coding	46471337,46469733,46466498	46471563,46471114,46468577	Gene ID= ENSG00000182013.17 TPM= 1.17 Transcript Type= protein_coding
chr19	46491841	46495896	46491841	46495896	-	transcript6834.chr19.nnic@NA	transcript6834.chr19.nnic	NA	46491841	46495896	Gene ID= novel_gene_chr19_6835 TPM= 2.34 Transcript Type= NA
chr19	46601249	46610781	46601249	46610781	+	transcript6837.chr19.nnic@CALM3	transcript6837.chr19.nnic	protein_coding	46601249,46601385,46605827,46608197,46608482,46608846,46609125	46601286,46601437,46605857,46608340,46608588,46608981,46610781	Gene ID= ENSG00000160014.16 TPM= 64.22 Transcript Type= NA
chr19	46601074	46609305	46601074	46609305	+	ENST00000391918.6@CALM3	ENST00000391918.6	protein_coding	46601074,46605827,46608197,46608482,46608846,46609125	46601176,46605857,46608340,46608588,46608981,46609305	Gene ID= ENSG00000160014.16 TPM= 1.17 Transcript Type= protein_coding
chr19	46601309	46609275	46601309	46609275	+	ENST00000477244.5@CALM3	ENST00000477244.5	protein_coding	46601309,46605827,46608199,46608482,46608846,46609125	46601437,46605857,46608340,46608588,46608981,46609275	Gene ID= ENSG00000160014.16 TPM= 37.36 Transcript Type= processed_transcript
chr19	46620469	46625142	46620469	46625142	-	transcript6852.chr19.nnic@PTGIR	transcript6852.chr19.nnic	protein_coding	46624997,46623458,46620469	46625142,46624237,46621634	Gene ID= ENSG00000160013.8 TPM= 5.84 Transcript Type= NA
chr19	46622963	46625142	46622963	46625142	-	transcript6854.chr19.nic@PTGIR	transcript6854.chr19.nic	protein_coding	46624997,46622963	46625142,46624237	Gene ID= ENSG00000160013.8 TPM= 2.34 Transcript Type= NA
chr19	46620468	46625118	46620468	46625118	-	ENST00000291294.6@PTGIR	ENST00000291294.6	protein_coding	46624997,46623458,46620468	46625118,46624237,46621672	Gene ID= ENSG00000160013.8 TPM= 25.69 Transcript Type= protein_coding
chr19	46647612	46661138	46647612	46661138	-	ENST00000391916.6@DACT3	ENST00000391916.6	protein_coding	46660816,46652979,46652660,46647612	46661138,46653075,46652812,46649872	Gene ID= ENSG00000197380.10 TPM= 19.85 Transcript Type= protein_coding
chr19	46674317	46717127	46674317	46717127	-	ENST00000433867.5@PRKD2	ENST00000433867.5	protein_coding	46716815,46716131,46713863,46710907,46704495,46704169,46701035,46700799,46697733,46697157,46693875,46691933,46691735,46690600,46689537,46681650,46678396,46675033,46674317	46717127,46716535,46714001,46711038,46704649,46704391,46701112,46700952,46697850,46697234,46694133,46691985,46691807,46690706,46689698,46681748,46678663,46675118,46674735	Gene ID= ENSG00000105287.12 TPM= 23.74 Transcript Type= protein_coding
chr19	46674319	46717102	46674319	46717102	-	transcript6859.chr19.nic@PRKD2	transcript6859.chr19.nic	protein_coding	46716951,46716131,46713863,46710907,46704495,46704169,46701035,46700799,46697733,46697157,46693875,46691933,46691735,46690600,46689537,46681650,46678396,46675033,46674319	46717102,46716535,46714001,46711038,46704649,46704391,46701112,46700952,46697850,46697234,46694133,46691985,46691807,46690706,46689698,46681748,46678663,46675118,46674735	Gene ID= ENSG00000105287.12 TPM= 18.48 Transcript Type= NA
chr19	46674320	46714324	46674320	46714324	-	ENST00000600194.5@PRKD2	ENST00000600194.5	protein_coding	46713863,46710907,46704495,46704169,46701035,46700799,46697733,46697157,46693875,46691933,46691735,46690600,46689537,46681650,46678396,46675033,46674320	46714324,46711038,46704649,46704391,46701112,46700952,46697850,46697234,46694133,46691985,46691807,46690706,46689698,46681748,46678663,46675118,46674735	Gene ID= ENSG00000105287.12 TPM= 16.93 Transcript Type= protein_coding
chr19	46674316	46716596	46674316	46716596	-	ENST00000291281.8@PRKD2	ENST00000291281.8	protein_coding	46716131,46713863,46710907,46704495,46704169,46701035,46700799,46697733,46697157,46693875,46691933,46691735,46690600,46689537,46681650,46678396,46675033,46674316	46716596,46714001,46711038,46704649,46704391,46701112,46700952,46697850,46697234,46694133,46691985,46691807,46690706,46689698,46681748,46678663,46675118,46674735	Gene ID= ENSG00000105287.12 TPM= 23.74 Transcript Type= protein_coding
chr19	46719511	46746483	46719511	46746483	-	transcript6870.chr19.nic@STRN4	transcript6870.chr19.nic	protein_coding	46746149,46738785,46738164,46736823,46733816,46733039,46730732,46728618,46727894,46727452,46725473,46725332,46724807,46723114,46722810,46722242,46721986,46720536,46719511	46746483,46738888,46738237,46736901,46733875,46733236,46730873,46728777,46728007,46727546,46725648,46725379,46724928,46723284,46722950,46722340,46722072,46720771,46720338	Gene ID= ENSG00000090372.14 TPM= 12.8 Transcript Type= NA
chr19	46719507	46746480	46719507	46746480	-	ENST00000263280.10@STRN4	ENST00000263280.10	protein_coding	46746149,46738785,46738164,46736823,46733039,46730732,46728618,46727894,46727452,46725473,46725332,46724807,46723114,46722810,46722242,46721986,46720536,46719507	46746480,46738888,46738237,46736901,46733236,46730873,46728777,46728007,46727546,46725648,46725379,46724928,46723284,46722950,46722340,46722072,46720771,46720338	Gene ID= ENSG00000090372.14 TPM= 111.46 Transcript Type= protein_coding
chr19	46719511	46746881	46719511	46746881	-	ENST00000391910.7@STRN4	ENST00000391910.7	protein_coding	46746149,46738785,46738164,46736823,46733039,46730732,46728618,46727894,46727452,46725473,46725332,46724807,46723114,46722810,46722242,46721986,46720536,46719511	46746881,46738888,46738237,46736901,46733236,46730873,46728777,46728007,46727567,46725648,46725379,46724928,46723284,46722950,46722340,46722072,46720771,46720338	Gene ID= ENSG00000090372.14 TPM= 36.64 Transcript Type= protein_coding
chr19	46719511	46746483	46719511	46746483	-	transcript6883.chr19.nic@STRN4	transcript6883.chr19.nic	protein_coding	46746149,46738785,46738164,46736823,46733039,46730732,46728618,46727894,46727452,46725473,46725332,46724807,46723114,46722810,46722242,46721986,46719511	46746483,46738888,46738237,46736901,46733236,46730873,46728777,46728007,46727546,46725648,46725379,46724928,46723284,46722950,46722340,46722072,46720771	Gene ID= ENSG00000090372.14 TPM= 9.27 Transcript Type= NA
chr19	46719511	46728315	46719511	46728315	-	transcript6893.chr19.nic@STRN4	transcript6893.chr19.nic	protein_coding	46727894,46727452,46725473,46725332,46724807,46723114,46722810,46722242,46721986,46720536,46719511	46728315,46727546,46725648,46725379,46724928,46723284,46722950,46722340,46722072,46720771,46720338	Gene ID= ENSG00000090372.14 TPM= 14.75 Transcript Type= NA
chr19	46719511	46726499	46719511	46726499	-	transcript6894.chr19.nic@STRN4	transcript6894.chr19.nic	protein_coding	46725473,46725332,46724807,46723114,46722810,46722242,46721986,46720536,46719511	46726499,46725379,46724928,46723284,46722950,46722340,46722072,46720771,46720338	Gene ID= ENSG00000090372.14 TPM= 10.84 Transcript Type= NA
chr19	46746046	46758485	46746046	46758485	+	ENST00000318584.9@FKRP	ENST00000318584.9	protein_coding	46746046,46748027,46748515,46755412	46746090,46748088,46748665,46758485	Gene ID= ENSG00000181027.10 TPM= 17.51 Transcript Type= protein_coding
chr19	46774883	46788594	46774883	46788594	-	ENST00000542575.6@SLC1A5	ENST00000542575.6	protein_coding	46787400,46784517,46784097,46782383,46778675,46777211,46776975,46774883	46788594,46784559,46784144,46782549,46778908,46777405,46777109,46775747	Gene ID= ENSG00000105281.12 TPM= 272.43 Transcript Type= protein_coding
chr19	46774924	46787342	46774924	46787342	-	ENST00000412532.6@SLC1A5	ENST00000412532.6	protein_coding	46787239,46784517,46784097,46782383,46778675,46777211,46776975,46774924	46787342,46784559,46784144,46782549,46778908,46777405,46777109,46775747	Gene ID= ENSG00000105281.12 TPM= 4.67 Transcript Type= protein_coding
chr19	46774885	46784905	46774885	46784905	-	ENST00000594991.5@SLC1A5	ENST00000594991.5	protein_coding	46784517,46784097,46782383,46778675,46777211,46776975,46774885	46784905,46784144,46782549,46778908,46777405,46777109,46775747	Gene ID= ENSG00000105281.12 TPM= 16.73 Transcript Type= protein_coding
chr19	46786481	46789101	46786481	46789101	+	transcript6922.chr19.nnic@NA	transcript6922.chr19.nnic	NA	46786481	46789101	Gene ID= novel_gene_chr19_6923 TPM= 4.67 Transcript Type= NA
chr19	46838158	46850316	46838158	46850316	-	ENST00000601498.5@AP2S1	ENST00000601498.5	protein_coding	46850134,46845993,46839465,46838740,46838158	46850316,46846142,46839578,46838799,46838548	Gene ID= ENSG00000042753.11 TPM= 10.51 Transcript Type= protein_coding
chr19	46838167	46850992	46838167	46850992	-	ENST00000263270.10@AP2S1	ENST00000263270.10	protein_coding	46850764,46845993,46839465,46838740,46838167	46850992,46846142,46839578,46838799,46838548	Gene ID= ENSG00000042753.11 TPM= 85.23 Transcript Type= protein_coding
chr19	46838158	46850834	46838158	46850834	-	ENST00000593442.5@AP2S1	ENST00000593442.5	protein_coding	46850764,46839465,46838740,46838158	46850834,46839578,46838799,46838548	Gene ID= ENSG00000042753.11 TPM= 4.67 Transcript Type= protein_coding
chr19	46863054	46867710	46863054	46867710	-	transcript6931.chr19.nnic@NA	transcript6931.chr19.nnic	NA	46863054	46867710	Gene ID= novel_gene_chr19_6932 TPM= 2.34 Transcript Type= NA
chr19	47045907	47048630	47045907	47048630	-	ENST00000253047.6@TMEM160	ENST00000253047.6	protein_coding	47048407,47046593,47045907	47048630,47046685,47046252	Gene ID= ENSG00000130748.6 TPM= 28.02 Transcript Type= protein_coding
chr19	47064187	47113752	47064187	47113752	-	ENST00000253048.9@ZC3H4	ENST00000253048.9	protein_coding	47113720,47112424,47094389,47093970,47089967,47086384,47085318,47085056,47084345,47082184,47081513,47072352,47071778,47069092,47064187	47113752,47112589,47094608,47094080,47090189,47086538,47085414,47085195,47084455,47082295,47081622,47072713,47072121,47069343,47067869	Gene ID= ENSG00000130749.9 TPM= 75.89 Transcript Type= protein_coding
chr19	47130907	47210191	47130907	47210191	+	transcript6940.chr19.nnic@SAE1	transcript6940.chr19.nnic	protein_coding	47130907,47143494,47150202,47152898,47155114,47169818,47197233,47203671,47205062,47209159	47131028,47143605,47150375,47153040,47155213,47169923,47197377,47203740,47205129,47210191	Gene ID= ENSG00000142230.11 TPM= 4.9 Transcript Type= NA
chr19	47130829	47210191	47130829	47210191	+	transcript6941.chr19.nnic@SAE1	transcript6941.chr19.nnic	protein_coding	47130829,47143494,47150202,47152898,47155114,47169818,47197233,47203671,47205104,47209159	47131028,47143605,47150375,47153040,47155213,47169923,47197377,47203740,47205129,47210191	Gene ID= ENSG00000142230.11 TPM= 6.07 Transcript Type= NA
chr19	47130826	47210191	47130826	47210191	+	transcript6944.chr19.nic@SAE1	transcript6944.chr19.nic	protein_coding	47130826,47143494,47150202,47152898,47155114,47169818,47197233,47203671,47209159	47130858,47143605,47150375,47153040,47155213,47169923,47197377,47203740,47210191	Gene ID= ENSG00000142230.11 TPM= 8.79 Transcript Type= NA
chr19	47130829	47176494	47130829	47176494	+	transcript6949.chr19.nnic@SAE1	transcript6949.chr19.nnic	protein_coding	47130829,47143494,47150202,47152898,47155114,47169818,47176215	47131028,47143605,47150375,47153040,47155213,47169923,47176494	Gene ID= ENSG00000142230.11 TPM= 2.34 Transcript Type= NA
chr19	47130863	47210191	47130863	47210191	+	ENST00000270225.11@SAE1	ENST00000270225.11	protein_coding	47130863,47143494,47150202,47152898,47155114,47169818,47197233,47203671,47209159	47131028,47143605,47150375,47153040,47155213,47169923,47197377,47203740,47210191	Gene ID= ENSG00000142230.11 TPM= 88.19 Transcript Type= protein_coding
chr19	47130895	47210170	47130895	47210170	+	ENST00000392776.3@SAE1	ENST00000392776.3	protein_coding	47130895,47143494,47150202,47152898,47155114,47169818,47203671,47209159	47131028,47143605,47150375,47153040,47155213,47169923,47203740,47210170	Gene ID= ENSG00000142230.11 TPM= 8.17 Transcript Type= protein_coding
chr19	47130889	47210190	47130889	47210190	+	ENST00000596995.1@SAE1	ENST00000596995.1	protein_coding	47130889,47143494,47150202,47152898,47155114,47169818,47197233,47203671,47209159	47131112,47143605,47150375,47153040,47155213,47169923,47197377,47203740,47210190	Gene ID= ENSG00000142230.11 TPM= 5.29 Transcript Type= nonsense_mediated_decay
chr19	47220824	47232766	47220824	47232766	-	ENST00000449228.5@BBC3	ENST00000449228.5	protein_coding	47232515,47228158,47226564,47220824	47232766,47228446,47226754,47221918	Gene ID= ENSG00000105327.17 TPM= 11.33 Transcript Type= protein_coding
chr19	47220824	47231206	47220824	47231206	-	transcript6954.chr19.nnic@BBC3	transcript6954.chr19.nnic	protein_coding	47230929,47226564,47220824	47231206,47226754,47221918	Gene ID= ENSG00000105327.17 TPM= 18.92 Transcript Type= NA
chr19	47220824	47231226	47220824	47231226	-	transcript6956.chr19.nnic@BBC3	transcript6956.chr19.nnic	protein_coding	47230929,47220824	47231226,47221918	Gene ID= ENSG00000105327.17 TPM= 9.57 Transcript Type= NA
chr19	47220822	47222568	47220822	47222568	-	ENST00000601438.2@BBC3	ENST00000601438.2	protein_coding	47220822	47222568	Gene ID= ENSG00000105327.17 TPM= 6.07 Transcript Type= retained_intron
chr19	47220827	47231194	47220827	47231194	-	ENST00000439096.2@BBC3	ENST00000439096.2	protein_coding	47230929,47228158,47226564,47220827	47231194,47228446,47226754,47221918	Gene ID= ENSG00000105327.17 TPM= 17.16 Transcript Type= protein_coding
chr19	47256459	47271953	47256459	47271953	+	ENST00000221922.10@CCDC9	ENST00000221922.10	protein_coding	47256459,47258330,47258559,47260321,47260588,47264603,47264773,47266611,47270407,47270553,47271082,47271274	47256609,47258403,47258663,47260422,47260839,47264686,47264946,47266792,47270453,47270688,47271187,47271953	Gene ID= ENSG00000105321.12 TPM= 28.02 Transcript Type= protein_coding
chr19	47265986	47268197	47265986	47268197	-	transcript6974.chr19.nnic@NA	transcript6974.chr19.nnic	NA	47265986	47268197	Gene ID= novel_gene_chr19_6975 TPM= 22.18 Transcript Type= NA
chr19	47274383	47275696	47274383	47275696	+	transcript6971.chr19.nnic@INAFM1	transcript6971.chr19.nnic	protein_coding	47274383,47275047	47274498,47275696	Gene ID= ENSG00000257704.3 TPM= 5.84 Transcript Type= NA
chr19	47274453	47275707	47274453	47275707	+	ENST00000552360.3@INAFM1	ENST00000552360.3	protein_coding	47274453	47275707	Gene ID= ENSG00000257704.3 TPM= 11.68 Transcript Type= protein_coding
chr19	47309874	47322066	47309874	47322066	+	ENST00000355085.3@C5AR1	ENST00000355085.3	protein_coding	47309874,47319781	47309898,47322066	Gene ID= ENSG00000197405.7 TPM= 54.88 Transcript Type= protein_coding
chr19	47349302	47382645	47349302	47382645	+	transcript6980.chr19.nnic@DHX34	transcript6980.chr19.nnic	protein_coding	47349302,47352754,47355034,47357866,47359968,47362476,47366981,47372730,47373599,47375466,47375924,47376443,47376915,47377100,47379710,47380816,47381186,47381980	47349352,47353730,47355350,47358120,47360070,47362693,47367155,47372923,47373700,47375708,47376097,47376560,47376989,47377206,47379985,47380992,47381324,47382645	Gene ID= ENSG00000134815.18 TPM= 8.17 Transcript Type= NA
chr19	47405429	47406377	47405429	47406377	-	transcript6989.chr19.nnic@NA	transcript6989.chr19.nnic	NA	47405429	47406377	Gene ID= novel_gene_chr19_6990 TPM= 2.34 Transcript Type= NA
chr19	47475150	47484261	47475150	47484261	-	transcript6992.chr19.nnic@KPTN	transcript6992.chr19.nnic	protein_coding	47483935,47483502,47483295,47483161,47480958,47480760,47480298,47479863,47477706,47476803,47476532,47476115,47475150	47484261,47483584,47483379,47483215,47481033,47480833,47480407,47479940,47477781,47476938,47476714,47476231,47475544	Gene ID= ENSG00000118162.13 TPM= 2.34 Transcript Type= NA
chr19	47475144	47484268	47475144	47484268	-	ENST00000338134.7@KPTN	ENST00000338134.7	protein_coding	47483935,47483502,47483295,47483161,47480958,47480760,47480298,47479863,47477706,47476803,47476532,47475144	47484268,47483584,47483379,47483215,47481033,47480833,47480407,47479940,47477781,47476938,47476714,47475544	Gene ID= ENSG00000118162.13 TPM= 12.26 Transcript Type= protein_coding
chr19	47475150	47484261	47475150	47484261	-	transcript6994.chr19.nnic@KPTN	transcript6994.chr19.nnic	protein_coding	47483935,47483502,47483295,47483161,47480958,47480298,47479863,47477706,47476803,47476532,47476115,47475150	47484261,47483584,47483379,47483215,47481033,47480833,47479940,47477781,47476938,47476714,47476301,47475544	Gene ID= ENSG00000118162.13 TPM= 3.5 Transcript Type= NA
chr19	47475144	47484261	47475144	47484261	-	transcript6995.chr19.nic@KPTN	transcript6995.chr19.nic	protein_coding	47483935,47483502,47483295,47483161,47480958,47480298,47479863,47477706,47476803,47476532,47475144	47484261,47483584,47483379,47483215,47481033,47480833,47479940,47477781,47476938,47476714,47475544	Gene ID= ENSG00000118162.13 TPM= 8.76 Transcript Type= NA
chr19	47484282	47496382	47484282	47496382	+	ENST00000593284.5@NAPA-AS1	ENST00000593284.5	antisense_RNA	47484282,47493447,47495028	47484524,47493601,47496382	Gene ID= ENSG00000268061.5 TPM= 4.67 Transcript Type= antisense_RNA
chr19	47487642	47515097	47487642	47515097	-	transcript7001.chr19.nic@NAPA	transcript7001.chr19.nic	protein_coding	47514843,47503423,47500633,47495550,47493416,47493119,47492961,47492015,47490788,47489711,47488235,47487642	47515097,47503502,47500749,47495596,47493493,47493174,47493045,47492119,47490856,47489761,47488389,47487890	Gene ID= ENSG00000105402.7 TPM= 12.65 Transcript Type= NA
chr19	47487637	47515240	47487637	47515240	-	ENST00000263354.7@NAPA	ENST00000263354.7	protein_coding	47514843,47503423,47500633,47495550,47493416,47493119,47492961,47492015,47490788,47489711,47487637	47515240,47503502,47500749,47495596,47493493,47493174,47493045,47492119,47490856,47489761,47488389	Gene ID= ENSG00000105402.7 TPM= 240.17 Transcript Type= protein_coding
chr19	47487680	47515058	47487680	47515058	-	ENST00000594001.5@NAPA	ENST00000594001.5	protein_coding	47514843,47495550,47493416,47493119,47492961,47492015,47490788,47489711,47487680	47515058,47495596,47493493,47493174,47493045,47492119,47490856,47489761,47488389	Gene ID= ENSG00000105402.7 TPM= 9.57 Transcript Type= nonsense_mediated_decay
chr19	47625300	47629151	47625300	47629151	-	transcript7022.chr19.nnic@NA	transcript7022.chr19.nnic	NA	47625300	47629151	Gene ID= novel_gene_chr19_7023 TPM= 5.84 Transcript Type= NA
chr19	47608196	47703277	47608196	47703277	+	ENST00000396720.7@BICRA	ENST00000396720.7	protein_coding	47608196,47670443,47673570,47673720,47675851,47679321,47681976,47694115,47694900,47695365,47696451,47698634,47698965,47699303,47701328	47608282,47670544,47673615,47673762,47675916,47681276,47682152,47694726,47695080,47695474,47696512,47698782,47699059,47699405,47703277	Gene ID= ENSG00000063169.10 TPM= 12.84 Transcript Type= protein_coding
chr19	47713343	47743134	47713343	47743134	+	ENST00000263277.7@EHD2	ENST00000263277.7	protein_coding	47713343,47716558,47718509,47725812,47736369,47740881	47713538,47717016,47718606,47726224,47736533,47743134	Gene ID= ENSG00000024422.11 TPM= 234.69 Transcript Type= protein_coding
chr19	47741879	47745094	47741879	47745094	+	transcript7050.chr19.nnic@NA	transcript7050.chr19.nnic	NA	47741879	47745094	Gene ID= novel_gene_chr19_7051 TPM= 11.68 Transcript Type= NA
chr19	47745522	47757058	47745522	47757058	+	ENST00000246802.9@NOP53	ENST00000246802.9	protein_coding	47745522,47746967,47750178,47750908,47751520,47752512,47754527,47754709,47755348,47755756,47756528,47756688,47756999	47745783,47747031,47750286,47751107,47751590,47752607,47754631,47754891,47755523,47755822,47756604,47756744,47757058	Gene ID= ENSG00000105373.18 TPM= 600.53 Transcript Type= protein_coding
chr19	47778572	47784681	47778572	47784681	+	ENST00000601048.5@SELENOW	ENST00000601048.5	protein_coding	47778572,47780725,47780864,47781108,47781290,47784290	47778814,47780749,47780917,47781182,47781388,47784681	Gene ID= ENSG00000178980.14 TPM= 230.02 Transcript Type= protein_coding
chr19	47778933	47784681	47778933	47784681	+	ENST00000598273.5@SELENOW	ENST00000598273.5	protein_coding	47778933,47780864,47781108,47781290,47784290	47780749,47780917,47781182,47781388,47784681	Gene ID= ENSG00000178980.14 TPM= 8.17 Transcript Type= retained_intron
chr19	48047846	48055059	48047846	48055059	-	ENST00000594790.1@PLA2G4C	ENST00000594790.1	protein_coding	48054878,48052997,48047846	48055059,48053147,48048388	Gene ID= ENSG00000105499.13 TPM= 2.34 Transcript Type= retained_intron
chr19	48115449	48170368	48115449	48170368	-	transcript7065.chr19.nnic@LIG1	transcript7065.chr19.nnic	protein_coding	48170241,48165550,48162262,48161372,48157014,48153872,48151232,48150088,48149763,48143883,48143543,48139971,48137522,48137008,48136034,48135680,48133981,48132982,48131076,48127910,48127277,48123174,48122934,48120167,48119137,48117638,48115873,48115449	48170368,48165623,48162351,48161507,48157140,48153967,48151339,48150210,48149841,48143963,48143599,48140143,48137688,48137084,48136254,48135779,48134066,48133097,48131171,48128020,48127348,48123318,48123016,48121322,48119190,48117781,48115965,48115732	Gene ID= ENSG00000105486.13 TPM= 5.84 Transcript Type= NA
chr19	48115445	48170603	48115445	48170603	-	ENST00000263274.11@LIG1	ENST00000263274.11	protein_coding	48170241,48165550,48162262,48161372,48157014,48153872,48151232,48150088,48149763,48143883,48143543,48139971,48137522,48137008,48136034,48135680,48133981,48132982,48131076,48127910,48127277,48123174,48122934,48121170,48119137,48117638,48115873,48115445	48170603,48165623,48162351,48161507,48157140,48153967,48151339,48150210,48149841,48143963,48143599,48140143,48137688,48137084,48136125,48135779,48134066,48133097,48131171,48128020,48127348,48123318,48123016,48121322,48119190,48117781,48115965,48115732	Gene ID= ENSG00000105486.13 TPM= 9.34 Transcript Type= protein_coding
chr19	48170692	48197620	48170692	48197620	+	ENST00000614654.1@C19orf68	ENST00000614654.1	protein_coding	48170692,48171794,48182455,48194653	48170714,48172077,48182767,48197620	Gene ID= ENSG00000185453.12 TPM= 14.01 Transcript Type= protein_coding
chr19	48209644	48249668	48209644	48249668	-	ENST00000518979.5@CARD8	ENST00000518979.5	protein_coding	48249523,48240962,48234403,48231660,48230777,48230438,48221730,48215340,48209644	48249668,48241063,48234543,48231810,48231006,48230697,48221855,48215384,48211975	Gene ID= ENSG00000105483.17 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr19	48255675	48258199	48255675	48258199	+	ENST00000602172.1@CARD8-AS1	ENST00000602172.1	antisense_RNA	48255675,48256351	48255794,48258199	Gene ID= ENSG00000268001.1 TPM= 12.84 Transcript Type= antisense_RNA
chr19	48325373	48330553	48325373	48330553	+	transcript7091.chr19.nnic@EMP3	transcript7091.chr19.nnic	protein_coding	48325373,48326830,48329352,48330301	48325610,48326922,48329492,48330553	Gene ID= ENSG00000142227.10 TPM= 5.06 Transcript Type= NA
chr19	48325347	48330553	48325347	48330553	+	ENST00000596315.5@EMP3	ENST00000596315.5	protein_coding	48325347,48327521,48329352,48330301	48325610,48327623,48329492,48330553	Gene ID= ENSG00000142227.10 TPM= 3.3 Transcript Type= protein_coding
chr19	48325325	48330553	48325325	48330553	+	ENST00000270221.10@EMP3	ENST00000270221.10	protein_coding	48325325,48326830,48327521,48329352,48330301	48325610,48326922,48327623,48329492,48330553	Gene ID= ENSG00000142227.10 TPM= 104.88 Transcript Type= protein_coding
chr19	48332356	48364237	48332356	48364237	-	ENST00000293261.7@TMEM143	ENST00000293261.7	protein_coding	48363898,48363291,48360072,48345160,48343321,48342530,48334008,48332356	48364237,48363531,48360176,48345354,48343451,48342809,48334197,48333433	Gene ID= ENSG00000161558.10 TPM= 6.42 Transcript Type= protein_coding
chr19	48332357	48363989	48332357	48363989	-	transcript7088.chr19.nic@TMEM143	transcript7088.chr19.nic	protein_coding	48363898,48363291,48360072,48345160,48342530,48334008,48332357	48363989,48363531,48360176,48345354,48343451,48334197,48333433	Gene ID= ENSG00000161558.10 TPM= 2.92 Transcript Type= NA
chr19	48378122	48378726	48378122	48378726	-	transcript7094.chr19.nnic@NA	transcript7094.chr19.nnic	NA	48378122	48378726	Gene ID= novel_gene_chr19_7095 TPM= 2.34 Transcript Type= NA
chr19	48382570	48391553	48382570	48391553	-	ENST00000330720.6@KDELR1	ENST00000330720.6	protein_coding	48391268,48390424,48389553,48384230,48382570	48391553,48390524,48389711,48384482,48383327	Gene ID= ENSG00000105438.8 TPM= 126.68 Transcript Type= protein_coding
chr19	48382578	48390855	48382578	48390855	-	ENST00000597017.5@KDELR1	ENST00000597017.5	protein_coding	48390424,48389553,48384230,48382578	48390855,48389711,48384482,48383327	Gene ID= ENSG00000105438.8 TPM= 14.59 Transcript Type= protein_coding
chr19	48445984	48453897	48445984	48453897	+	transcript7112.chr19.nnic@GRWD1	transcript7112.chr19.nnic	protein_coding	48445984,48446385,48446681,48450168,48450666,48451034,48452708	48446192,48446502,48446843,48450526,48450808,48451231,48453897	Gene ID= ENSG00000105447.12 TPM= 4.67 Transcript Type= NA
chr19	48445773	48457022	48445773	48457022	+	ENST00000253237.9@GRWD1	ENST00000253237.9	protein_coding	48445773,48446385,48446681,48450313,48450666,48451034,48452708	48446192,48446502,48446843,48450526,48450808,48451231,48457022	Gene ID= ENSG00000105447.12 TPM= 5.84 Transcript Type= protein_coding
chr19	48469310	48482311	48469310	48482311	+	transcript7101.chr19.nnic@CYTH2	transcript7101.chr19.nnic	protein_coding	48469310,48470353,48470603,48472325,48473298,48473905,48474182,48474838,48478069,48478275,48478438,48479123,48480750	48469526,48470500,48470669,48472443,48473378,48474017,48474330,48474949,48478145,48478346,48478592,48479359,48482311	Gene ID= ENSG00000105443.14 TPM= 3.12 Transcript Type= NA
chr19	48469325	48482314	48469325	48482314	+	transcript7102.chr19.nic@CYTH2	transcript7102.chr19.nic	protein_coding	48469325,48470353,48470603,48472325,48473298,48473905,48474182,48474838,48478069,48478275,48478438,48479123,48480750	48469526,48470500,48470669,48472443,48473378,48474017,48474330,48474949,48478145,48478346,48478592,48480088,48482314	Gene ID= ENSG00000105443.14 TPM= 7.79 Transcript Type= NA
chr19	48469032	48482314	48469032	48482314	+	ENST00000452733.6@CYTH2	ENST00000452733.6	protein_coding	48469032,48470353,48470603,48472325,48473298,48473905,48474182,48474838,48478069,48478275,48478438,48479123	48469526,48470500,48470669,48472443,48473378,48474017,48474330,48474949,48478145,48478346,48478592,48482314	Gene ID= ENSG00000105443.14 TPM= 79.01 Transcript Type= protein_coding
chr19	48469321	48479365	48469321	48479365	+	ENST00000391881.7@CYTH2	ENST00000391881.7	protein_coding	48469321,48470353,48470603,48472325,48473298,48473905,48474182,48474838,48478069,48478275,48478438,48479123	48469526,48470500,48470669,48472443,48473378,48474017,48474330,48474953,48478145,48478346,48478592,48479365	Gene ID= ENSG00000105443.14 TPM= 46.12 Transcript Type= nonsense_mediated_decay
chr19	48469347	48479382	48469347	48479382	+	ENST00000493260.5@CYTH2	ENST00000493260.5	protein_coding	48469347,48470353,48470603,48472325,48473298,48473905,48474182,48474838,48478275,48478438,48479123	48469526,48470500,48470669,48472443,48473378,48474017,48474330,48478145,48478346,48478592,48479382	Gene ID= ENSG00000105443.14 TPM= 8.76 Transcript Type= retained_intron
chr19	48552075	48599425	48552075	48599425	+	ENST00000201586.6@SULT2B1	ENST00000201586.6	protein_coding	48552075,48575941,48587229,48591609,48592722,48596739,48599135	48552323,48576083,48587437,48591735,48592816,48596919,48599425	Gene ID= ENSG00000088002.11 TPM= 45.54 Transcript Type= protein_coding
chr19	48600638	48615093	48600638	48615093	-	transcript7126.chr19.nnic@FAM83E	transcript7126.chr19.nnic	protein_coding	48614937,48614708,48612908,48610680,48609876,48603494,48600638	48615093,48614839,48614627,48610847,48610000,48603911,48601369	Gene ID= ENSG00000105523.3 TPM= 12.26 Transcript Type= NA
chr19	48600638	48615034	48600638	48615034	-	transcript7129.chr19.nnic@FAM83E	transcript7129.chr19.nnic	protein_coding	48614937,48612908,48610680,48609876,48603494,48600638	48615034,48614839,48610847,48610000,48603911,48601369	Gene ID= ENSG00000105523.3 TPM= 5.25 Transcript Type= NA
chr19	48608438	48614886	48608438	48614886	-	transcript7133.chr19.nic@FAM83E	transcript7133.chr19.nic	protein_coding	48612908,48610680,48608438	48614886,48610847,48610000	Gene ID= ENSG00000105523.3 TPM= 2.34 Transcript Type= NA
chr19	48615328	48619536	48615328	48619536	-	ENST00000549920.5@RPL18	ENST00000549920.5	protein_coding	48619141,48617791,48617316,48616726,48616079,48615877,48615328	48619536,48617877,48617423,48616824,48616202,48615946,48615447	Gene ID= ENSG00000063177.12 TPM= 193.24 Transcript Type= protein_coding
chr19	48615332	48619175	48615332	48619175	-	ENST00000547892.1@RPL18	ENST00000547892.1	protein_coding	48615332	48619175	Gene ID= ENSG00000063177.12 TPM= 2.34 Transcript Type= retained_intron
chr19	48615331	48617884	48615331	48617884	-	ENST00000084795.9@RPL18	ENST00000084795.9	protein_coding	48617791,48617316,48616726,48616079,48615877,48615331	48617884,48617423,48616824,48616202,48615946,48615447	Gene ID= ENSG00000063177.12 TPM= 40.28 Transcript Type= protein_coding
chr19	48615331	48619183	48615331	48619183	-	ENST00000551749.5@RPL18	ENST00000551749.5	protein_coding	48619141,48617791,48616079,48615331	48619183,48617877,48617423,48615946	Gene ID= ENSG00000063177.12 TPM= 2.34 Transcript Type= retained_intron
chr19	48619291	48630405	48619291	48630405	+	ENST00000245222.8@SPHK2	ENST00000245222.8	protein_coding	48619291,48620402,48625891,48627692,48627975,48628162,48628681	48619543,48620553,48626362,48627841,48628069,48628277,48630405	Gene ID= ENSG00000063176.15 TPM= 12.65 Transcript Type= protein_coding
chr19	48619421	48630717	48619421	48630717	+	transcript7137.chr19.nic@SPHK2	transcript7137.chr19.nic	protein_coding	48619421,48620402,48625891,48627692,48627975,48628162,48630434	48619543,48620553,48626362,48627841,48628069,48628277,48630717	Gene ID= ENSG00000063176.15 TPM= 6.22 Transcript Type= NA
chr19	48619534	48630405	48619534	48630405	+	ENST00000598088.5@SPHK2	ENST00000598088.5	protein_coding	48619534,48620402,48625891,48627692,48627975,48628162,48628681	48619689,48620553,48626362,48627841,48628069,48628277,48630405	Gene ID= ENSG00000063176.15 TPM= 11.48 Transcript Type= protein_coding
chr19	48625029	48626814	48625029	48626814	+	ENST00000598574.1@SPHK2	ENST00000598574.1	protein_coding	48625029	48626814	Gene ID= ENSG00000063176.15 TPM= 2.34 Transcript Type= retained_intron
chr19	48623200	48625504	48623200	48625504	-	transcript7152.chr19.nnic@NA	transcript7152.chr19.nnic	NA	48623200	48625504	Gene ID= novel_gene_chr19_7153 TPM= 3.5 Transcript Type= NA
chr19	48748011	48753676	48748011	48753676	-	transcript7165.chr19.nic@FUT1	transcript7165.chr19.nic	protein_coding	48753325,48752892,48752490,48748011	48753676,48753122,48752725,48751283	Gene ID= ENSG00000174951.10 TPM= 35.41 Transcript Type= NA
chr19	48748011	48753676	48748011	48753676	-	transcript7169.chr19.nic@FUT1	transcript7169.chr19.nic	protein_coding	48753325,48752490,48748011	48753676,48753122,48751283	Gene ID= ENSG00000174951.10 TPM= 36 Transcript Type= NA
chr19	48795066	48811020	48795066	48811020	-	ENST00000316273.10@BCAT2	ENST00000316273.10	protein_coding	48810984,48807000,48806517,48800187,48799981,48799675,48797191,48796937,48796578,48796428,48795066	48811020,48807074,48806717,48800297,48800100,48799838,48797333,48797022,48796718,48796502,48795464	Gene ID= ENSG00000105552.14 TPM= 26.66 Transcript Type= protein_coding
chr19	48795065	48811027	48795065	48811027	-	ENST00000402551.5@BCAT2	ENST00000402551.5	protein_coding	48810984,48807756,48807000,48806517,48800187,48799981,48799675,48797191,48796937,48796578,48796428,48795065	48811027,48808236,48807074,48806717,48800297,48800100,48799838,48797333,48797022,48796718,48796502,48795464	Gene ID= ENSG00000105552.14 TPM= 19.65 Transcript Type= protein_coding
chr19	48795062	48811012	48795062	48811012	-	ENST00000545387.6@BCAT2	ENST00000545387.6	protein_coding	48810984,48800187,48799981,48799675,48797191,48796937,48796578,48796428,48795062	48811012,48800297,48800100,48799838,48797333,48797022,48796718,48796502,48795464	Gene ID= ENSG00000105552.14 TPM= 12.06 Transcript Type= protein_coding
chr19	48813018	48836704	48813018	48836704	-	transcript7188.chr19.nic@HSD17B14	transcript7188.chr19.nic	protein_coding	48836324,48835805,48834276,48832666,48831668,48815037,48813663,48813018	48836704,48835843,48834358,48832732,48831759,48815141,48813730,48813348	Gene ID= ENSG00000087076.8 TPM= 11.09 Transcript Type= NA
chr19	48813017	48836678	48813017	48836678	-	ENST00000263278.8@HSD17B14	ENST00000263278.8	protein_coding	48836324,48835805,48834276,48832666,48831668,48815037,48813663,48813456,48813017	48836678,48835843,48834358,48832732,48831759,48815141,48813730,48813552,48813348	Gene ID= ENSG00000087076.8 TPM= 25.1 Transcript Type= protein_coding
chr19	48837097	48868639	48837097	48868639	-	transcript7177.chr19.nic@PLEKHA4	transcript7177.chr19.nic	protein_coding	48868083,48867537,48865503,48861620,48861401,48860350,48859469,48858860,48857422,48854217,48854007,48853682,48852228,48847900,48845517,48845370,48841149,48838017,48837097	48868639,48867626,48865610,48861692,48861501,48860459,48859684,48859139,48857496,48854264,48854087,48853831,48852326,48848040,48845616,48845446,48841310,48838129,48837551	Gene ID= ENSG00000105559.11 TPM= 7.01 Transcript Type= NA
chr19	48837097	48868632	48837097	48868632	-	ENST00000263265.10@PLEKHA4	ENST00000263265.10	protein_coding	48868083,48867537,48865503,48861620,48861401,48860350,48859469,48858860,48857422,48854217,48854007,48853682,48852228,48847900,48845517,48845370,48841149,48839205,48838017,48837097	48868632,48867626,48865610,48861692,48861501,48860459,48859684,48859139,48857496,48854264,48854087,48853831,48852326,48848040,48845616,48845446,48841310,48839263,48838129,48837551	Gene ID= ENSG00000105559.11 TPM= 21.02 Transcript Type= protein_coding
chr19	48872421	48876058	48872421	48876058	+	transcript7236.chr19.nic@PPP1R15A	transcript7236.chr19.nic	protein_coding	48872421,48873225	48872651,48876058	Gene ID= ENSG00000087074.7 TPM= 16.35 Transcript Type= NA
chr19	48872392	48876057	48872392	48876057	+	ENST00000200453.5@PPP1R15A	ENST00000200453.5	protein_coding	48872392,48873225,48875614	48872651,48874898,48876057	Gene ID= ENSG00000087074.7 TPM= 493.89 Transcript Type= protein_coding
chr19	48900050	48923372	48900050	48923372	+	ENST00000405315.8@NUCB1	ENST00000405315.8	protein_coding	48900050,48900786,48904347,48905753,48911149,48913011,48913474,48918726,48919030,48919194,48921154,48921827,48922318	48900372,48900931,48904454,48905885,48911252,48913196,48913564,48918784,48919122,48919286,48921324,48921932,48923372	Gene ID= ENSG00000104805.15 TPM= 6.62 Transcript Type= protein_coding
chr19	48900375	48923268	48900375	48923268	+	transcript7212.chr19.nic@NUCB1	transcript7212.chr19.nic	protein_coding	48900375,48900786,48904347,48905753,48911149,48913011,48913474,48918726,48919030,48919194,48921154,48921827,48922318	48900658,48900931,48904454,48905885,48911252,48913196,48913564,48918784,48919122,48919286,48921324,48921932,48923268	Gene ID= ENSG00000104805.15 TPM= 32.49 Transcript Type= NA
chr19	48933682	48944969	48933682	48944969	+	ENST00000221403.6@DHDH	ENST00000221403.6	protein_coding	48933682,48935000,48936032,48939449,48942440,48944357,48944824	48933811,48935111,48936195,48939701,48942564,48944507,48944969	Gene ID= ENSG00000104808.7 TPM= 2.34 Transcript Type= protein_coding
chr19	48954794	48961796	48954794	48961796	+	transcript7239.chr19.nnic@BAX	transcript7239.chr19.nnic	protein_coding	48954794,48955548,48955687,48956198,48960810,48961483	48954962,48955599,48955833,48956333,48960914,48961796	Gene ID= ENSG00000087088.19 TPM= 2.92 Transcript Type= NA
chr19	48954894	48961798	48954894	48961798	+	transcript7241.chr19.nic@BAX	transcript7241.chr19.nic	protein_coding	48954894,48955687,48955715,48956198,48960810,48961532	48954962,48955713,48955833,48956333,48960914,48961798	Gene ID= ENSG00000087088.19 TPM= 3.5 Transcript Type= NA
chr19	48954863	48961426	48954863	48961426	+	transcript7249.chr19.nic@BAX	transcript7249.chr19.nic	protein_coding	48954863,48955548,48956198,48960810	48954962,48955833,48956333,48961426	Gene ID= ENSG00000087088.19 TPM= 2.34 Transcript Type= NA
chr19	48954877	48961798	48954877	48961798	+	ENST00000345358.11@BAX	ENST00000345358.11	protein_coding	48954877,48955548,48955687,48956198,48960810,48961532	48954962,48955599,48955833,48956333,48960914,48961798	Gene ID= ENSG00000087088.19 TPM= 43.2 Transcript Type= protein_coding
chr19	48954929	48961795	48954929	48961795	+	ENST00000391871.4@BAX	ENST00000391871.4	protein_coding	48954929,48955687,48955715,48956198,48960810,48961532	48954964,48955713,48955833,48956333,48960914,48961795	Gene ID= ENSG00000087088.19 TPM= 2.92 Transcript Type= protein_coding
chr19	48954929	48961798	48954929	48961798	+	ENST00000293288.12@BAX	ENST00000293288.12	protein_coding	48954929,48955548,48955687,48956198,48960810	48954962,48955599,48955833,48956333,48961798	Gene ID= ENSG00000087088.19 TPM= 14.01 Transcript Type= protein_coding
chr19	48965301	48966878	48965301	48966878	+	ENST00000331825.10@FTL	ENST00000331825.10	protein_coding	48965301,48965770,48966281,48966583	48965609,48965916,48966406,48966878	Gene ID= ENSG00000087086.14 TPM= 10324.06 Transcript Type= protein_coding
chr19	48968125	48993309	48968125	48993309	-	ENST00000323798.7@GYS1	ENST00000323798.7	protein_coding	48992995,48991302,48987194,48985850,48985461,48982720,48982255,48981530,48978098,48977924,48974620,48974213,48970928,48970546,48969775,48968125	48993309,48991483,48987385,48986035,48985605,48982837,48982375,48981636,48978157,48978002,48974733,48974339,48971023,48970709,48969855,48969611	Gene ID= ENSG00000104812.14 TPM= 16.35 Transcript Type= protein_coding
chr19	48993448	49015995	48993448	49015995	+	ENST00000595090.5@RUVBL2	ENST00000595090.5	protein_coding	48993448,48999319,49003279,49004277,49007018,49007302,49009776,49009973,49010488,49010999,49011192,49014484,49015021,49015572,49015817	48993923,48999373,49003334,49004418,49007147,49007368,49009882,49010066,49010611,49011093,49011310,49014603,49015150,49015686,49015995	Gene ID= ENSG00000183207.13 TPM= 10.51 Transcript Type= protein_coding
chr19	49061076	49064972	49061076	49064972	-	transcript7312.chr19.nic@AC008687.8	transcript7312.chr19.nic	protein_coding	49063739,49061076	49064972,49062009	Gene ID= ENSG00000283663.1 TPM= 5.84 Transcript Type= NA
chr19	49061128	49064859	49061128	49064859	-	transcript7313.chr19.nic@AC008687.8	transcript7313.chr19.nic	protein_coding	49063739,49061128	49064859,49062009	Gene ID= ENSG00000283663.1 TPM= 3.5 Transcript Type= NA
chr19	49085421	49108602	49085421	49108602	+	transcript7291.chr19.nic@SNRNP70	transcript7291.chr19.nic	protein_coding	49085421,49086405,49090291,49090466,49098427,49098642,49101390,49102114,49107625,49107795	49085636,49086561,49090353,49090520,49098491,49098704,49101471,49104735,49107712,49108602	Gene ID= ENSG00000104852.14 TPM= 175.96 Transcript Type= NA
chr19	49085422	49108605	49085422	49108605	+	transcript7292.chr19.nic@SNRNP70	transcript7292.chr19.nic	protein_coding	49085422,49086405,49090291,49090466,49098427,49098642,49101390,49102114,49107625,49107822	49085636,49086561,49090353,49090520,49098491,49098704,49101471,49104735,49107712,49108605	Gene ID= ENSG00000104852.14 TPM= 91.07 Transcript Type= NA
chr19	49085419	49108598	49085419	49108598	+	ENST00000601065.5@SNRNP70	ENST00000601065.5	protein_coding	49085419,49086405,49090291,49090466,49098427,49098642,49101390,49102114,49104634,49107625,49107795	49085636,49086561,49090353,49090520,49098491,49098704,49101471,49102173,49104735,49107712,49108598	Gene ID= ENSG00000104852.14 TPM= 26.27 Transcript Type= nonsense_mediated_decay
chr19	49085451	49108563	49085451	49108563	+	ENST00000221448.9@SNRNP70	ENST00000221448.9	protein_coding	49085451,49086405,49090291,49090466,49098427,49098642,49101390,49104634,49107625,49107822	49085636,49086561,49090353,49090520,49098491,49098704,49101471,49104735,49107712,49108563	Gene ID= ENSG00000104852.14 TPM= 40.87 Transcript Type= protein_coding
chr19	49085451	49108603	49085451	49108603	+	ENST00000401730.5@SNRNP70	ENST00000401730.5	protein_coding	49085451,49086405,49090291,49090466,49098427,49098642,49101390,49102114,49104634,49107625,49107795	49085636,49086561,49090353,49090520,49098491,49098704,49101471,49103587,49104735,49107712,49108603	Gene ID= ENSG00000104852.14 TPM= 16.58 Transcript Type= nonsense_mediated_decay
chr19	49085495	49108605	49085495	49108605	+	ENST00000595231.5@SNRNP70	ENST00000595231.5	protein_coding	49085495,49086405,49090291,49090466,49098427,49098642,49101390,49102114,49104634,49107625,49107822	49085636,49086561,49090353,49090520,49098491,49098704,49101471,49102185,49104735,49107712,49108605	Gene ID= ENSG00000104852.14 TPM= 28.61 Transcript Type= nonsense_mediated_decay
chr19	49114361	49118460	49114361	49118460	+	ENST00000221459.6@LIN7B	ENST00000221459.6	protein_coding	49114361,49114849,49115260,49116263,49117855,49118352	49114441,49114967,49115331,49116472,49118018,49118460	Gene ID= ENSG00000104863.11 TPM= 1.17 Transcript Type= protein_coding
chr19	49114380	49118460	49114380	49118460	+	transcript7319.chr19.nic@LIN7B	transcript7319.chr19.nic	protein_coding	49114380,49114849,49115260,49116263,49117855	49114441,49114967,49115331,49116472,49118460	Gene ID= ENSG00000104863.11 TPM= 2.34 Transcript Type= NA
chr19	49118397	49119140	49118397	49119140	-	ENST00000408991.3@C19orf73	ENST00000408991.3	protein_coding	49118397	49119140	Gene ID= ENSG00000221916.3 TPM= 1.17 Transcript Type= protein_coding
chr19	49151198	49155424	49151198	49155424	-	ENST00000252825.8@HRC	ENST00000252825.8	protein_coding	49153407,49153261,49152310,49152004,49151517,49151198	49155424,49153331,49152378,49152058,49151553,49151332	Gene ID= ENSG00000130528.11 TPM= 3.5 Transcript Type= protein_coding
chr19	49157741	49211836	49157741	49211836	+	ENST00000252826.9@TRPM4	ENST00000252826.9	protein_coding	49157741,49158192,49166041,49167917,49168260,49168553,49171357,49171578,49172009,49181349,49182578,49183078,49188641,49188946,49190208,49190696,49196440,49200300,49200611,49201964,49210209,49210710,49211015,49211164,49211494	49157890,49158259,49166215,49168097,49168423,49168736,49171418,49171769,49172108,49181461,49182922,49183212,49188770,49189091,49190320,49190773,49196874,49200432,49200785,49202141,49210405,49210842,49211087,49211269,49211836	Gene ID= ENSG00000130529.15 TPM= 88.74 Transcript Type= protein_coding
chr19	49157792	49159921	49157792	49159921	+	ENST00000599628.5@TRPM4	ENST00000599628.5	protein_coding	49157792,49158192	49157890,49159921	Gene ID= ENSG00000130529.15 TPM= 3.5 Transcript Type= protein_coding
chr19	49335400	49340606	49335400	49340606	+	ENST00000323906.8@CD37	ENST00000323906.8	protein_coding	49335400,49335714,49336909,49337147,49337925,49338700,49339330,49340251	49335609,49335786,49337033,49337221,49338029,49338936,49339413,49340606	Gene ID= ENSG00000104894.11 TPM= 98.08 Transcript Type= protein_coding
chr19	49335414	49340606	49335414	49340606	+	transcript7362.chr19.nic@CD37	transcript7362.chr19.nic	protein_coding	49335414,49337147,49337925,49338700,49339330	49337033,49337221,49338029,49338936,49340606	Gene ID= ENSG00000104894.11 TPM= 19.85 Transcript Type= NA
chr19	49335396	49340575	49335396	49340575	+	ENST00000426897.6@CD37	ENST00000426897.6	protein_coding	49335396,49335714,49336909,49337147,49337925,49338700,49339330,49340251	49335575,49335786,49337033,49337221,49338029,49338936,49339413,49340575	Gene ID= ENSG00000104894.11 TPM= 2.34 Transcript Type= protein_coding
chr19	49340595	49362416	49340595	49362416	-	transcript7344.chr19.nic@TEAD2	transcript7344.chr19.nic	protein_coding	49362373,49359844,49359435,49357252,49355959,49355303,49355148,49351301,49348703,49347190,49343231,49342438,49340595	49362416,49360081,49359499,49357314,49355970,49355419,49355206,49351365,49348845,49347363,49343398,49342590,49341437	Gene ID= ENSG00000074219.13 TPM= 14.01 Transcript Type= NA
chr19	49340595	49362457	49340595	49362457	-	ENST00000311227.6@TEAD2	ENST00000311227.6	protein_coding	49362373,49359844,49359435,49357252,49355312,49355148,49351301,49348703,49347190,49343231,49342438,49340595	49362457,49360081,49359499,49357314,49355419,49355206,49351365,49348845,49347363,49343398,49342590,49341437	Gene ID= ENSG00000074219.13 TPM= 28.41 Transcript Type= protein_coding
chr19	49340595	49362382	49340595	49362382	-	ENST00000593945.5@TEAD2	ENST00000593945.5	protein_coding	49362333,49359844,49359435,49357252,49355959,49355312,49355148,49351301,49348703,49347190,49343231,49342438,49340595	49362382,49360081,49359499,49357314,49355970,49355419,49355206,49351365,49348845,49347363,49343398,49342590,49341437	Gene ID= ENSG00000074219.13 TPM= 7.39 Transcript Type= protein_coding
chr19	49446299	49451831	49446299	49451831	-	transcript7389.chr19.nic@PIH1D1	transcript7389.chr19.nic	protein_coding	49451485,49450782,49447827,49447338,49447024,49446551,49446299	49451831,49450848,49449654,49447467,49447099,49446694,49446423	Gene ID= ENSG00000104872.10 TPM= 7.01 Transcript Type= NA
chr19	49446299	49451832	49446299	49451832	-	transcript7390.chr19.nic@PIH1D1	transcript7390.chr19.nic	protein_coding	49451485,49450782,49447827,49447338,49447024,49446551,49446299	49451832,49450939,49449654,49447467,49447099,49446694,49446423	Gene ID= ENSG00000104872.10 TPM= 4.67 Transcript Type= NA
chr19	49446299	49451814	49446299	49451814	-	transcript7394.chr19.nic@PIH1D1	transcript7394.chr19.nic	protein_coding	49451485,49450782,49447024,49446551,49446299	49451814,49450939,49449654,49446694,49446423	Gene ID= ENSG00000104872.10 TPM= 2.92 Transcript Type= NA
chr19	49446299	49451810	49446299	49451810	-	ENST00000262265.9@PIH1D1	ENST00000262265.9	protein_coding	49451485,49450782,49449475,49448001,49447827,49447338,49447024,49446551,49446299	49451810,49450848,49449654,49448062,49447908,49447467,49447099,49446694,49446423	Gene ID= ENSG00000104872.10 TPM= 48.46 Transcript Type= protein_coding
chr19	49453169	49471048	49453169	49471048	+	ENST00000293350.8@ALDH16A1	ENST00000293350.8	protein_coding	49453169,49458486,49458960,49459670,49460822,49461619,49461884,49462570,49463854,49464127,49464417,49464632,49465738,49466082,49468381,49468864,49470306	49453421,49458588,49459086,49459848,49460899,49461800,49462036,49462755,49463949,49464263,49464522,49464762,49465905,49466283,49468566,49468986,49471048	Gene ID= ENSG00000161618.9 TPM= 106.83 Transcript Type= protein_coding
chr19	49453236	49470585	49453236	49470585	+	ENST00000455361.6@ALDH16A1	ENST00000455361.6	protein_coding	49453236,49458486,49458960,49459670,49460822,49461619,49462570,49463854,49464127,49464417,49464632,49465738,49466082,49468381,49468864,49470306	49453421,49458588,49459086,49459848,49460899,49461800,49462755,49463949,49464263,49464522,49464762,49465905,49466283,49468566,49468986,49470585	Gene ID= ENSG00000161618.9 TPM= 2.34 Transcript Type= protein_coding
chr19	49474561	49486231	49474561	49486231	+	ENST00000594009.5@FLT3LG	ENST00000594009.5	protein_coding	49474561,49475691,49476145,49476423,49478909,49480298,49480552,49485964	49474672,49475801,49476198,49476566,49479047,49480476,49480620,49486231	Gene ID= ENSG00000090554.12 TPM= 1.17 Transcript Type= protein_coding
chr19	49487603	49492308	49487603	49492308	+	ENST00000624069.3@RPL13A	ENST00000624069.3	protein_coding	49487603,49489850,49490232,49490475,49490779,49491040,49491425,49491729	49487644,49489912,49490297,49490576,49490864,49491099,49491547,49492308	Gene ID= ENSG00000142541.16 TPM= 27.24 Transcript Type= nonsense_mediated_decay
chr19	49487554	49492308	49487554	49492308	+	ENST00000391857.8@RPL13A	ENST00000391857.8	protein_coding	49487554,49489850,49490232,49490475,49490779,49491040,49491425,49491729	49487644,49489922,49490297,49490576,49490864,49491099,49491547,49492308	Gene ID= ENSG00000142541.16 TPM= 451.08 Transcript Type= protein_coding
chr19	49487634	49491843	49487634	49491843	+	ENST00000467825.2@RPL13A	ENST00000467825.2	protein_coding	49487634,49489850,49490232,49490475,49490779,49491040,49491425,49491729	49487644,49489922,49490297,49490600,49490864,49491099,49491547,49491843	Gene ID= ENSG00000142541.16 TPM= 724.29 Transcript Type= protein_coding
chr19	49496374	49499689	49496374	49499689	+	ENST00000270625.6@RPS11	ENST00000270625.6	protein_coding	49496374,49497194,49497520,49497917,49499512	49496471,49497325,49497595,49498046,49499689	Gene ID= ENSG00000142534.6 TPM= 107.62 Transcript Type= protein_coding
chr19	49496370	49499689	49496370	49499689	+	ENST00000599167.5@RPS11	ENST00000599167.5	protein_coding	49496370,49497194,49499512	49496471,49498046,49499689	Gene ID= ENSG00000142534.6 TPM= 8.96 Transcript Type= retained_intron
chr19	49496388	49499689	49496388	49499689	+	transcript7409.chr19.nic@RPS11	transcript7409.chr19.nic	protein_coding	49496388,49497194	49496471,49499689	Gene ID= ENSG00000142534.6 TPM= 4.67 Transcript Type= NA
chr19	49496431	49499689	49496431	49499689	+	ENST00000602252.5@RPS11	ENST00000602252.5	protein_coding	49496431,49497194,49497917,49499512	49496471,49497595,49498046,49499689	Gene ID= ENSG00000142534.6 TPM= 21.22 Transcript Type= retained_intron
chr19	49512279	49526333	49512279	49526333	+	ENST00000221466.9@FCGRT	ENST00000221466.9	protein_coding	49512279,49513387,49513882,49514211,49524507,49525457,49526010	49512750,49513473,49514133,49514486,49524776,49525573,49526333	Gene ID= ENSG00000104870.12 TPM= 356.47 Transcript Type= protein_coding
chr19	49513154	49526333	49513154	49526333	+	ENST00000426395.7@FCGRT	ENST00000426395.7	protein_coding	49513154,49513882,49514211,49524507,49525457,49526010	49513473,49514133,49514486,49524776,49525573,49526333	Gene ID= ENSG00000104870.12 TPM= 96.09 Transcript Type= protein_coding
chr19	49514999	49515990	49514999	49515990	-	transcript7456.chr19.nnic@NA	transcript7456.chr19.nnic	NA	49514999	49515990	Gene ID= novel_gene_chr19_7457 TPM= 7.01 Transcript Type= NA
chr19	49521669	49522687	49521669	49522687	-	transcript7458.chr19.nnic@NA	transcript7458.chr19.nnic	NA	49521669	49522687	Gene ID= novel_gene_chr19_7459 TPM= 3.5 Transcript Type= NA
chr19	49524284	49526331	49524284	49526331	+	transcript7454.chr19.nnic@NA	transcript7454.chr19.nnic	NA	49524284	49526331	Gene ID= novel_gene_chr19_7455 TPM= 5.84 Transcript Type= NA
chr19	49555711	49580535	49555711	49580535	-	ENST00000598820.5@NOSIP	ENST00000598820.5	protein_coding	49580515,49560622,49559934,49557090,49556875,49556549,49556317,49555711	49580535,49560692,49560039,49558978,49556993,49556736,49556425,49555822	Gene ID= ENSG00000142546.13 TPM= 3.5 Transcript Type= retained_intron
chr19	49555711	49580572	49555711	49580572	-	ENST00000596358.5@NOSIP	ENST00000596358.5	protein_coding	49580515,49560622,49559934,49558897,49557090,49556875,49556549,49556317,49555711	49580572,49560692,49560039,49558978,49557249,49556993,49556736,49556425,49555822	Gene ID= ENSG00000142546.13 TPM= 15.76 Transcript Type= protein_coding
chr19	49555718	49557295	49555718	49557295	-	ENST00000596477.1@NOSIP	ENST00000596477.1	protein_coding	49557090,49556549,49556317,49555718	49557295,49556993,49556425,49555822	Gene ID= ENSG00000142546.13 TPM= 1.75 Transcript Type= retained_intron
chr19	49581326	49591015	49581326	49591015	+	ENST00000246794.9@PRRG2	ENST00000246794.9	protein_coding	49581326,49583207,49583542,49583913,49588497,49589900,49590371	49581481,49583304,49583717,49583952,49588632,49590052,49591015	Gene ID= ENSG00000126460.10 TPM= 2.34 Transcript Type= protein_coding
chr19	49635292	49640201	49635292	49640201	-	ENST00000246792.3@RRAS	ENST00000246792.3	protein_coding	49639946,49637043,49636824,49636619,49635734,49635292	49640201,49637130,49636926,49636727,49635852,49635660	Gene ID= ENSG00000126458.3 TPM= 243.83 Transcript Type= protein_coding
chr19	49635292	49640142	49635292	49640142	-	transcript7470.chr19.nic@RRAS	transcript7470.chr19.nic	protein_coding	49639946,49636824,49636619,49635734,49635292	49640142,49637130,49636727,49635852,49635660	Gene ID= ENSG00000126458.3 TPM= 15.56 Transcript Type= NA
chr19	49642125	49658642	49642125	49658642	+	ENST00000360565.7@SCAF1	ENST00000360565.7	protein_coding	49642125,49645021,49645354,49646108,49646526,49646715,49650868,49654349,49654652,49657761,49658208	49642242,49645134,49645411,49646202,49646626,49646830,49653705,49654431,49654870,49657889,49658642	Gene ID= ENSG00000126461.14 TPM= 109.75 Transcript Type= protein_coding
chr19	49659572	49665830	49659572	49665830	-	transcript7477.chr19.nnic@IRF3	transcript7477.chr19.nnic	protein_coding	49665672,49664553,49663343,49663188,49662425,49661948,49660713,49659572	49665830,49664673,49663514,49663258,49662617,49662328,49660828,49659833	Gene ID= ENSG00000126456.15 TPM= 4.44 Transcript Type= NA
chr19	49659572	49665850	49659572	49665850	-	transcript7480.chr19.nic@IRF3	transcript7480.chr19.nic	protein_coding	49665672,49664674,49663343,49663188,49662425,49661948,49660713,49659572	49665850,49664846,49663514,49663258,49662617,49662328,49660828,49659833	Gene ID= ENSG00000126456.15 TPM= 9.11 Transcript Type= NA
chr19	49659575	49665857	49659575	49665857	-	ENST00000597636.5@IRF3	ENST00000597636.5	protein_coding	49664674,49663343,49663188,49662425,49661450,49660713,49659575	49665857,49663514,49663258,49662617,49662328,49660828,49659833	Gene ID= ENSG00000126456.15 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr19	49659572	49664530	49659572	49664530	-	transcript7487.chr19.nic@IRF3	transcript7487.chr19.nic	protein_coding	49664443,49663343,49663188,49662425,49661948,49660713,49659572	49664530,49663514,49663258,49662617,49662328,49660828,49659833	Gene ID= ENSG00000126456.15 TPM= 4.44 Transcript Type= NA
chr19	49659572	49665875	49659572	49665875	-	ENST00000377139.7@IRF3	ENST00000377139.7	protein_coding	49665631,49664674,49663343,49663188,49662425,49661948,49660713,49659572	49665875,49664846,49663514,49663258,49662617,49662328,49660828,49659833	Gene ID= ENSG00000126456.15 TPM= 28.96 Transcript Type= protein_coding
chr19	49659572	49665169	49659572	49665169	-	ENST00000309877.11@IRF3	ENST00000309877.11	protein_coding	49664674,49663343,49663188,49662425,49661948,49660713,49659572	49665169,49663514,49663258,49662617,49662328,49660828,49659833	Gene ID= ENSG00000126456.15 TPM= 4.44 Transcript Type= protein_coding
chr19	49665566	49673916	49665566	49673916	+	ENST00000246785.7@BCL2L12	ENST00000246785.7	protein_coding	49665566,49666685,49667019,49668851,49669024,49670216,49673698	49666067,49666799,49667161,49668937,49669115,49670488,49673916	Gene ID= ENSG00000126453.9 TPM= 8.17 Transcript Type= protein_coding
chr19	49677226	49688447	49677226	49688447	+	transcript7495.chr19.nic@PRMT1	transcript7495.chr19.nic	protein_coding	49677226,49679872,49680140,49680487,49681910,49682196,49683927,49684754,49684922,49686093,49686605,49688162	49677316,49679929,49680238,49680588,49682065,49682259,49684069,49684841,49685037,49686243,49686726,49688447	Gene ID= ENSG00000126457.21 TPM= 8.76 Transcript Type= NA
chr19	49677152	49688447	49677152	49688447	+	ENST00000391851.8@PRMT1	ENST00000391851.8	protein_coding	49677152,49680487,49681910,49682196,49683927,49684754,49684922,49686093,49686605,49688162	49677316,49680588,49682065,49682259,49684069,49684841,49685037,49686243,49686726,49688447	Gene ID= ENSG00000126457.21 TPM= 96.33 Transcript Type= protein_coding
chr19	49677272	49688447	49677272	49688447	+	ENST00000454376.6@PRMT1	ENST00000454376.6	protein_coding	49677272,49679872,49680487,49681910,49682196,49683927,49684754,49684922,49686093,49686605,49688162	49677316,49679925,49680588,49682065,49682259,49684069,49684841,49685037,49686243,49686726,49688447	Gene ID= ENSG00000126457.21 TPM= 7.59 Transcript Type= protein_coding
chr19	49688664	49690575	49688664	49690575	+	ENST00000420022.3@ADM5	ENST00000420022.3	protein_coding	49688664,49690106	49689911,49690575	Gene ID= ENSG00000224420.3 TPM= 1.17 Transcript Type= protein_coding
chr19	49739755	49763330	49739755	49763330	-	ENST00000246801.7@TSKS	ENST00000246801.7	protein_coding	49763078,49762004,49748374,49748085,49747389,49746470,49745202,49744231,49741885,49740059,49739755	49763330,49762232,49748469,49748168,49747472,49746798,49745396,49744404,49742020,49740183,49739932	Gene ID= ENSG00000126467.10 TPM= 1.17 Transcript Type= protein_coding
chr19	49766968	49807112	49766968	49807112	+	ENST00000354293.9@AP2A1	ENST00000354293.9	protein_coding	49766968,49781757,49781947,49782531,49791935,49792991,49795630,49798802,49799327,49799629,49799968,49800961,49801390,49801722,49801981,49802949,49803107,49803287,49805453,49805661,49805872,49806119,49806681	49767200,49781825,49782089,49782724,49792064,49793092,49795738,49798952,49799495,49799766,49800150,49801058,49801621,49801889,49802141,49803005,49803189,49803376,49805576,49805777,49805941,49806253,49807112	Gene ID= ENSG00000196961.12 TPM= 103.92 Transcript Type= protein_coding
chr19	49767134	49807110	49767134	49807110	+	ENST00000359032.9@AP2A1	ENST00000359032.9	protein_coding	49767134,49781757,49781947,49782531,49791935,49792991,49795630,49798802,49799327,49799629,49799968,49800961,49801390,49801722,49801981,49802534,49802949,49803107,49803287,49805453,49805661,49805872,49806119,49806681	49767200,49781825,49782089,49782724,49792064,49793092,49795738,49798952,49799495,49799766,49800150,49801058,49801621,49801889,49802141,49802599,49803005,49803189,49803376,49805576,49805777,49805941,49806253,49807110	Gene ID= ENSG00000196961.12 TPM= 3.5 Transcript Type= protein_coding
chr19	49806885	49813325	49806885	49813325	-	transcript7512.chr19.nic@FUZ	transcript7512.chr19.nic	protein_coding	49812996,49812615,49812251,49811631,49811363,49809378,49809163,49808717,49808574,49808414,49808115,49806885	49813325,49812736,49812335,49811699,49811467,49809575,49809258,49808823,49808638,49808488,49808159,49807374	Gene ID= ENSG00000010361.13 TPM= 2.34 Transcript Type= NA
chr19	49806869	49813325	49806869	49813325	-	transcript7515.chr19.nic@FUZ	transcript7515.chr19.nic	protein_coding	49812996,49812447,49812251,49811631,49811363,49809378,49809163,49808717,49808574,49808414,49806869	49813325,49812736,49812335,49811699,49811467,49809575,49809258,49808823,49808638,49808488,49807374	Gene ID= ENSG00000010361.13 TPM= 3.5 Transcript Type= NA
chr19	49806869	49813324	49806869	49813324	-	transcript7519.chr19.nic@FUZ	transcript7519.chr19.nic	protein_coding	49812615,49812251,49811631,49811363,49809378,49809163,49808717,49808574,49808414,49806869	49813324,49812335,49811699,49811467,49809575,49809258,49808823,49808638,49808488,49807374	Gene ID= ENSG00000010361.13 TPM= 2.34 Transcript Type= NA
chr19	49806897	49813270	49806897	49813270	-	ENST00000313777.8@FUZ	ENST00000313777.8	protein_coding	49812996,49812615,49812251,49811631,49811363,49809378,49809163,49808717,49808574,49808414,49806897	49813270,49812736,49812335,49811699,49811467,49809575,49809258,49808823,49808638,49808488,49807374	Gene ID= ENSG00000010361.13 TPM= 12.26 Transcript Type= protein_coding
chr19	49806890	49813249	49806890	49813249	-	ENST00000533418.5@FUZ	ENST00000533418.5	protein_coding	49813133,49812615,49812251,49811631,49811363,49809378,49809163,49808717,49808574,49808414,49806890	49813249,49812736,49812335,49811699,49811467,49809575,49809258,49808823,49808638,49808488,49807374	Gene ID= ENSG00000010361.13 TPM= 2.92 Transcript Type= protein_coding
chr19	49806920	49813273	49806920	49813273	-	ENST00000377092.8@FUZ	ENST00000377092.8	protein_coding	49812996,49812638,49812251,49811631,49811363,49809378,49809163,49808717,49808574,49808414,49806920	49813273,49812736,49812335,49811699,49811467,49809575,49809258,49808823,49808638,49808488,49807374	Gene ID= ENSG00000010361.13 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr19	49818289	49836979	49818289	49836979	+	ENST00000312865.10@MED25	ENST00000312865.10	protein_coding	49818289,49818571,49819172,49828449,49828970,49829786,49830088,49830511,49830694,49831333,49831936,49832100,49832308,49834986,49835534,49835727,49836226,49836847	49818475,49818616,49819296,49828547,49829090,49829948,49830218,49830598,49830887,49831461,49832021,49832157,49832415,49835177,49835605,49835945,49836406,49836979	Gene ID= ENSG00000104973.16 TPM= 26.85 Transcript Type= protein_coding
chr19	49835388	49840381	49835388	49840381	+	transcript7530.chr19.nic@MED25	transcript7530.chr19.nic	protein_coding	49835388,49836226	49835945,49840381	Gene ID= ENSG00000104973.16 TPM= 3.5 Transcript Type= NA
chr19	49848489	49851059	49848489	49851059	-	transcript7565.chr19.nnic@NA	transcript7565.chr19.nnic	NA	49848489	49851059	Gene ID= novel_gene_chr19_7566 TPM= 2.34 Transcript Type= NA
chr19	49851034	49860740	49851034	49860740	+	transcript7544.chr19.nic@PTOV1	transcript7544.chr19.nic	protein_coding	49851034,49854406,49854652,49854831,49854970,49856975,49857693,49857904,49858057,49858549,49860056,49860268,49860614	49851499,49854543,49854734,49854888,49855077,49857130,49857782,49857977,49858114,49858653,49860183,49860336,49860740	Gene ID= ENSG00000104960.15 TPM= 6.81 Transcript Type= NA
chr19	49851034	49860740	49851034	49860740	+	transcript7548.chr19.nic@PTOV1	transcript7548.chr19.nic	protein_coding	49851034,49854406,49854652,49854831,49854970,49857693,49857904,49858057,49858549,49859986,49860268,49860614	49851499,49854543,49854734,49854888,49857130,49857782,49857977,49858114,49858653,49860183,49860336,49860740	Gene ID= ENSG00000104960.15 TPM= 8.56 Transcript Type= NA
chr19	49851191	49860744	49851191	49860744	+	ENST00000599732.5@PTOV1	ENST00000599732.5	protein_coding	49851191,49854406,49854652,49854831,49854970,49856975,49857693,49857904,49858057,49858549,49859986,49860268,49860614	49851499,49854543,49854734,49854888,49855077,49857130,49857782,49857977,49858114,49858653,49860183,49860336,49860744	Gene ID= ENSG00000104960.15 TPM= 114.23 Transcript Type= protein_coding
chr19	49851159	49860733	49851159	49860733	+	ENST00000391842.5@PTOV1	ENST00000391842.5	protein_coding	49851159,49854406,49854652,49854831,49854970,49856975,49857693,49857904,49858057,49858549,49859986,49860268	49851499,49854543,49854734,49854888,49855077,49857130,49857782,49857977,49858114,49858653,49860183,49860733	Gene ID= ENSG00000104960.15 TPM= 6.42 Transcript Type= protein_coding
chr19	49851225	49860740	49851225	49860740	+	ENST00000601675.5@PTOV1	ENST00000601675.5	protein_coding	49851225,49854406,49854652,49854831,49854970,49856975,49857693,49857904,49858057,49858549,49859986,49860268,49860566	49851499,49854543,49854734,49854888,49855077,49857130,49857782,49857977,49858114,49858653,49860183,49860336,49860740	Gene ID= ENSG00000104960.15 TPM= 7.59 Transcript Type= protein_coding
chr19	49857547	49859585	49857547	49859585	+	transcript7561.chr19.nnic@NA	transcript7561.chr19.nnic	NA	49857547	49859585	Gene ID= novel_gene_chr19_7562 TPM= 4.67 Transcript Type= NA
chr19	49858473	49860724	49858473	49860724	+	transcript7563.chr19.nnic@NA	transcript7563.chr19.nnic	NA	49858473	49860724	Gene ID= novel_gene_chr19_7564 TPM= 2.34 Transcript Type= NA
chr19	49861204	49867886	49861204	49867886	-	ENST00000322344.7@PNKP	ENST00000322344.7	protein_coding	49867469,49867054,49866399,49865127,49864324,49864179,49863964,49863689,49862690,49862538,49862371,49862185,49862044,49861772,49861608,49861449,49861204	49867886,49867217,49866445,49865426,49864403,49864236,49864071,49863760,49862738,49862608,49862463,49862281,49862105,49861881,49861695,49861510,49861365	Gene ID= ENSG00000039650.11 TPM= 27.82 Transcript Type= protein_coding
chr19	49861204	49867581	49861204	49867581	-	transcript7534.chr19.nic@PNKP	transcript7534.chr19.nic	protein_coding	49867469,49867054,49866399,49865127,49864324,49864179,49863964,49863689,49862690,49862538,49862371,49862185,49862044,49861772,49861608,49861449,49861204	49867581,49867217,49866528,49865426,49864403,49864236,49864071,49863760,49862738,49862608,49862463,49862281,49862105,49861881,49861695,49861510,49861365	Gene ID= ENSG00000039650.11 TPM= 4.47 Transcript Type= NA
chr19	49865602	49867581	49865602	49867581	-	transcript7560.chr19.nic@PNKP	transcript7560.chr19.nic	protein_coding	49867469,49865602	49867581,49867217	Gene ID= ENSG00000039650.11 TPM= 4.67 Transcript Type= NA
chr19	49861231	49867286	49861231	49867286	-	ENST00000596014.5@PNKP	ENST00000596014.5	protein_coding	49867054,49866399,49865127,49864324,49864179,49863964,49863689,49862690,49862538,49862371,49862185,49862044,49861772,49861608,49861449,49861231	49867286,49866445,49865426,49864403,49864236,49864071,49863760,49862738,49862608,49862463,49862281,49862105,49861881,49861695,49861510,49861365	Gene ID= ENSG00000039650.11 TPM= 3.89 Transcript Type= protein_coding
chr19	49869039	49877326	49869039	49877326	-	transcript7571.chr19.nnic@AKT1S1	transcript7571.chr19.nnic	protein_coding	49876603,49872917,49871812,49871547,49869039	49877326,49873302,49871891,49871716,49870060	Gene ID= ENSG00000204673.10 TPM= 25.69 Transcript Type= NA
chr19	49877425	49888744	49877425	49888744	+	ENST00000221543.9@TBC1D17	ENST00000221543.9	protein_coding	49877425,49878143,49878498,49880279,49881268,49882041,49882242,49882764,49882973,49883651,49884253,49884459,49884659,49887476,49887718,49888231,49888424	49877744,49878241,49878572,49880402,49881475,49882152,49882400,49882892,49883076,49883745,49884369,49884559,49884758,49887573,49887834,49888317,49888744	Gene ID= ENSG00000104946.12 TPM= 27.47 Transcript Type= protein_coding
chr19	49877687	49888743	49877687	49888743	+	transcript7578.chr19.nic@TBC1D17	transcript7578.chr19.nic	protein_coding	49877687,49878143,49878498,49880279,49881268,49882041,49882242,49882764,49882973,49883651,49884253,49884459,49884659,49887476,49887718,49888157,49888424	49877744,49878241,49879504,49880402,49881475,49882152,49882400,49882892,49883076,49883745,49884369,49884559,49884758,49887573,49887834,49888317,49888743	Gene ID= ENSG00000104946.12 TPM= 3.74 Transcript Type= NA
chr19	49878068	49888743	49878068	49888743	+	transcript7582.chr19.nic@TBC1D17	transcript7582.chr19.nic	protein_coding	49878068,49878498,49880279,49881268,49882041,49882242,49882764,49882973,49883651,49884253,49884459,49884659,49887476,49887718,49888157,49888424	49878241,49878572,49880402,49881475,49882152,49882400,49882892,49883076,49883745,49884369,49884559,49884758,49887573,49887834,49888317,49888743	Gene ID= ENSG00000104946.12 TPM= 5.29 Transcript Type= NA
chr19	49877515	49885534	49877515	49885534	+	transcript7583.chr19.nic@TBC1D17	transcript7583.chr19.nic	protein_coding	49877515,49878143,49878498,49880279,49881268,49882041,49882242,49882764,49882973,49883651,49884253,49884459,49884659,49885172	49877744,49878241,49878572,49880402,49881475,49882152,49882400,49882892,49883076,49883745,49884369,49884559,49884758,49885534	Gene ID= ENSG00000104946.12 TPM= 5.87 Transcript Type= NA
chr19	49878550	49888748	49878550	49888748	+	ENST00000596243.5@TBC1D17	ENST00000596243.5	protein_coding	49878550,49880279,49881268,49882041,49882242,49882764,49882973,49883651,49884253,49884459,49884659,49887476,49887718,49888231,49888424	49879504,49880402,49881475,49882152,49882400,49882892,49883076,49883745,49884369,49884559,49884758,49887573,49887834,49888317,49888748	Gene ID= ENSG00000104946.12 TPM= 11.33 Transcript Type= retained_intron
chr19	49889654	49896955	49889654	49896955	-	ENST00000391826.6@IL4I1	ENST00000391826.6	protein_coding	49896835,49896148,49895815,49895068,49894268,49891405,49890971,49889654	49896955,49896182,49896053,49895180,49894469,49891473,49891107,49890600	Gene ID= ENSG00000104951.15 TPM= 7.01 Transcript Type= protein_coding
chr19	49906825	49929538	49906825	49929538	-	transcript7591.chr19.nic@NUP62	transcript7591.chr19.nic	protein_coding	49929417,49927694,49906825	49929538,49927815,49909884	Gene ID= ENSG00000213024.11 TPM= 9.92 Transcript Type= NA
chr19	49907543	49929731	49907543	49929731	-	ENST00000352066.7@NUP62	ENST00000352066.7	protein_coding	49929326,49927694,49907543	49929731,49927815,49909884	Gene ID= ENSG00000213024.11 TPM= 5.25 Transcript Type= protein_coding
chr19	49906825	49929744	49906825	49929744	-	ENST00000422090.2@NUP62	ENST00000422090.2	protein_coding	49929326,49906825	49929744,49909884	Gene ID= ENSG00000213024.11 TPM= 16.93 Transcript Type= protein_coding
chr19	49906825	49929515	49906825	49929515	-	transcript7600.chr19.nnic@NUP62	transcript7600.chr19.nnic	protein_coding	49929417,49906825	49929515,49909884	Gene ID= ENSG00000213024.11 TPM= 14.59 Transcript Type= NA
chr19	49908106	49929504	49908106	49929504	-	ENST00000596217.1@NUP62	ENST00000596217.1	protein_coding	49927694,49908106	49929504,49909884	Gene ID= ENSG00000213024.11 TPM= 1.17 Transcript Type= protein_coding
chr19	49929143	49933935	49929143	49933935	+	ENST00000423777.6@ATF5	ENST00000423777.6	protein_coding	49929143,49930732,49932422	49929400,49931028,49933935	Gene ID= ENSG00000169136.10 TPM= 18.68 Transcript Type= protein_coding
chr19	49948985	49961172	49948985	49961172	-	ENST00000447370.6@SIGLEC11	ENST00000447370.6	protein_coding	49961006,49960552,49960137,49959773,49959360,49959030,49958643,49958283,49952298,49951891,49948985	49961172,49960935,49960421,49959820,49959623,49959077,49958900,49958570,49952394,49951972,49950236	Gene ID= ENSG00000161640.15 TPM= 1.17 Transcript Type= protein_coding
chr19	49976467	50025386	49976467	50025386	-	ENST00000316763.7@VRK3	ENST00000316763.7	protein_coding	50025267,50020585,50016024,50009236,50007569,50000790,49997504,49995191,49994814,49992860,49989639,49988372,49980955,49979083,49976467	50025386,50020647,50016163,50009385,50007826,50000854,49997570,49995275,49994919,49992952,49989771,49988492,49981013,49979242,49976784	Gene ID= ENSG00000105053.10 TPM= 11.68 Transcript Type= protein_coding
chr19	49981700	50025371	49981700	50025371	-	transcript7611.chr19.nic@VRK3	transcript7611.chr19.nic	protein_coding	50025346,50020585,50016024,50009236,50007569,50000790,49997504,49995191,49994814,49992860,49989639,49988372,49981700	50025371,50020647,50016163,50009385,50007826,50000854,49997570,49995275,49994919,49992952,49989771,49988492,49982188	Gene ID= ENSG00000105053.10 TPM= 3.5 Transcript Type= NA
chr19	50025806	50048772	50025806	50048772	+	ENST00000391821.6@ZNF473	ENST00000391821.6	protein_coding	50025806,50031014,50039161,50041730,50044670	50026122,50031091,50039287,50041819,50048772	Gene ID= ENSG00000142528.15 TPM= 11.09 Transcript Type= protein_coding
chr19	50025722	50048776	50025722	50048776	+	ENST00000595661.5@ZNF473	ENST00000595661.5	protein_coding	50025722,50025893,50030892,50039161,50041730,50044670	50025795,50026122,50031091,50039287,50041819,50048776	Gene ID= ENSG00000142528.15 TPM= 2.92 Transcript Type= protein_coding
chr19	50205390	50310539	50205390	50310539	+	transcript7628.chr19.nnic@MYH14	transcript7628.chr19.nnic	protein_coding	50205390,50210363,50217615,50223083,50223247,50225585,50226903,50230525,50231930,50244242,50247004,50248987,50249650,50250515,50252639,50257299,50259144,50260646,50261475,50263312,50266877,50268161,50271409,50271849,50272560,50275991,50276757,50278083,50280037,50280231,50281594,50286482,50289436,50290887,50292261,50293233,50293564,50301661,50307049,50309005,50309640	50205554,50210770,50217771,50223110,50223349,50225677,50226966,50230623,50232070,50244337,50247122,50249139,50249823,50250688,50252753,50257486,50259265,50260715,50261635,50263420,50267008,50268367,50271546,50271972,50272731,50276203,50276901,50278289,50280141,50280383,50281842,50286694,50289648,50291048,50292389,50293321,50293687,50301869,50307157,50309177,50310539	Gene ID= ENSG00000105357.15 TPM= 96.91 Transcript Type= NA
chr19	50203628	50310542	50203628	50310542	+	ENST00000376970.6@MYH14	ENST00000376970.6	protein_coding	50203628,50210363,50217615,50223083,50223247,50225585,50226903,50230525,50231930,50244242,50247004,50248987,50249650,50250515,50252639,50257299,50259144,50260646,50261475,50263312,50266877,50268161,50271409,50271849,50272560,50275991,50276757,50278083,50280037,50280231,50281594,50286482,50289436,50290887,50292261,50293233,50293564,50301661,50307049,50309005,50309640	50203671,50210770,50217771,50223110,50223349,50225677,50226966,50230623,50232070,50244337,50247122,50249139,50249823,50250688,50252753,50257486,50259265,50260715,50261635,50263420,50267008,50268367,50271546,50271972,50272731,50276203,50276901,50278289,50280141,50280383,50281842,50286694,50289648,50291048,50292389,50293321,50293687,50301869,50307157,50309177,50310542	Gene ID= ENSG00000105357.15 TPM= 61.88 Transcript Type= protein_coding
chr19	50203628	50310542	50203628	50310542	+	ENST00000425460.5@MYH14	ENST00000425460.5	protein_coding	50203628,50210363,50217615,50223083,50223247,50224154,50225585,50226903,50230525,50231930,50244242,50247004,50248987,50249650,50250515,50252639,50257299,50259144,50260646,50261475,50263312,50266877,50268161,50271409,50271849,50272560,50275991,50276757,50278083,50280037,50280231,50281594,50286482,50289436,50290887,50292261,50293233,50293564,50301661,50307049,50309005,50309640	50203671,50210770,50217771,50223110,50223349,50224177,50225677,50226966,50230623,50232070,50244337,50247122,50249139,50249823,50250688,50252753,50257486,50259265,50260715,50261635,50263420,50267008,50268367,50271546,50271972,50272731,50276203,50276901,50278289,50280141,50280383,50281842,50286694,50289648,50291048,50292389,50293321,50293687,50301869,50307157,50309177,50310542	Gene ID= ENSG00000105357.15 TPM= 47.87 Transcript Type= protein_coding
chr19	50203637	50271482	50203637	50271482	+	ENST00000599920.5@MYH14	ENST00000599920.5	protein_coding	50203637,50210363,50217615,50223083,50223247,50224154,50225585,50226903,50230525,50231930,50244242,50247004,50248987,50249650,50250515,50252639,50257299,50259144,50260646,50261475,50263312,50266877,50268161,50271409	50203671,50210770,50217771,50223110,50223349,50224177,50225677,50226966,50230623,50232070,50244337,50247122,50249139,50249823,50250688,50252753,50257486,50259265,50260715,50261635,50263420,50267008,50268367,50271482	Gene ID= ENSG00000105357.15 TPM= 1.17 Transcript Type= protein_coding
chr19	50316808	50318235	50316808	50318235	+	transcript7641.chr19.nnic@NA	transcript7641.chr19.nnic	NA	50316808	50318235	Gene ID= novel_gene_chr19_7642 TPM= 2.34 Transcript Type= NA
chr19	50358477	50365830	50358477	50365830	-	ENST00000253719.6@NAPSA	ENST00000253719.6	protein_coding	50365539,50362172,50361969,50361663,50360941,50359740,50359503,50359011,50358477	50365830,50362313,50362092,50361781,50361140,50359862,50359647,50359109,50358780	Gene ID= ENSG00000131400.7 TPM= 976.35 Transcript Type= protein_coding
chr19	50376457	50382982	50376457	50382982	+	transcript7688.chr19.nic@NR1H2	transcript7688.chr19.nic	protein_coding	50376457,50376719,50377587,50377733,50378149,50379002,50379780,50381966,50382456	50376576,50376826,50377648,50377870,50378796,50379181,50379879,50382174,50382982	Gene ID= ENSG00000131408.13 TPM= 7.46 Transcript Type= NA
chr19	50376469	50382982	50376469	50382982	+	ENST00000253727.9@NR1H2	ENST00000253727.9	protein_coding	50376469,50376719,50377587,50377733,50378149,50378522,50379002,50379780,50381966,50382456	50376576,50376826,50377648,50377870,50378439,50378796,50379181,50379879,50382174,50382982	Gene ID= ENSG00000131408.13 TPM= 270.17 Transcript Type= protein_coding
chr19	50376473	50382950	50376473	50382950	+	ENST00000599105.5@NR1H2	ENST00000599105.5	protein_coding	50376473,50376719,50377587,50377733,50378149,50378522,50379134,50379780,50381966,50382456	50376576,50376826,50377648,50377870,50378439,50378796,50379181,50379879,50382174,50382950	Gene ID= ENSG00000131408.13 TPM= 5.84 Transcript Type= protein_coding
chr19	50376458	50382978	50376458	50382978	+	ENST00000598168.5@NR1H2	ENST00000598168.5	protein_coding	50376458,50376719,50377587,50377733,50378149,50378522,50379092,50379780,50381966,50382456	50376576,50376826,50377648,50377870,50378439,50378796,50379181,50379879,50382174,50382978	Gene ID= ENSG00000131408.13 TPM= 2.65 Transcript Type= protein_coding
chr19	50384339	50418012	50384339	50418012	+	transcript7699.chr19.nic@POLD1	transcript7699.chr19.nic	protein_coding	50384339,50395025,50398851,50399371,50401778,50401999,50402205,50402454,50402612,50403053,50403493,50406182,50406407,50406983,50407327,50408785,50409122,50409519,50413426,50413742,50414815,50415438,50415724,50416396,50416610,50417045,50417172,50417842	50384390,50395150,50399053,50399484,50401924,50402124,50402373,50402535,50402741,50403219,50403597,50406322,50406517,50407174,50407415,50408901,50409235,50409666,50413521,50413879,50414990,50415590,50415826,50416528,50416723,50417097,50417269,50418012	Gene ID= ENSG00000062822.12 TPM= 16.44 Transcript Type= NA
chr19	50384347	50418012	50384347	50418012	+	transcript7704.chr19.nnic@POLD1	transcript7704.chr19.nnic	protein_coding	50384347,50398851,50399371,50401778,50401999,50402205,50402454,50402612,50403091,50403493,50406182,50406407,50406983,50407327,50408785,50409122,50409519,50413426,50413742,50414815,50415438,50415724,50416396,50416610,50417045,50417172,50417842	50384390,50399053,50399484,50401924,50402124,50402373,50402535,50402741,50403219,50403597,50406322,50406517,50407174,50407415,50408901,50409235,50409666,50413521,50413879,50414990,50415590,50415826,50416528,50416723,50417097,50417269,50418012	Gene ID= ENSG00000062822.12 TPM= 11.77 Transcript Type= NA
chr19	50384339	50418012	50384339	50418012	+	transcript7707.chr19.nnic@POLD1	transcript7707.chr19.nnic	protein_coding	50384339,50395025,50401778,50401999,50402205,50402454,50402612,50403053,50403493,50406182,50406407,50406983,50407327,50408785,50409122,50409519,50413426,50413742,50414815,50415438,50415724,50416396,50416610,50417045,50417172,50417842	50384390,50395150,50401924,50402124,50402373,50402535,50402741,50403219,50403597,50406322,50406517,50407174,50407415,50408901,50409235,50409666,50413521,50413879,50414990,50415590,50415826,50416528,50416723,50417097,50417269,50418012	Gene ID= ENSG00000062822.12 TPM= 12.94 Transcript Type= NA
chr19	50384323	50418018	50384323	50418018	+	ENST00000613923.4@POLD1	ENST00000613923.4	protein_coding	50384323,50398851,50399371,50401778,50401999,50402205,50402454,50402612,50403053,50403493,50406182,50406407,50406983,50407327,50408707,50409122,50409519,50413426,50413742,50414815,50415438,50415724,50416396,50416610,50417045,50417172,50417842	50384390,50399053,50399484,50401924,50402124,50402373,50402535,50402741,50403219,50403597,50406322,50406517,50407174,50407415,50408901,50409235,50409666,50413521,50413879,50414990,50415590,50415826,50416528,50416723,50417097,50417269,50418018	Gene ID= ENSG00000062822.12 TPM= 5.55 Transcript Type= protein_coding
chr19	50418938	50431313	50418938	50431313	+	ENST00000595883.5@SPIB	ENST00000595883.5	protein_coding	50418938,50419946,50422473,50422823,50423605,50428038	50418985,50419973,50422545,50423037,50423755,50431313	Gene ID= ENSG00000269404.6 TPM= 1.17 Transcript Type= protein_coding
chr19	50466788	50476746	50466788	50476746	-	ENST00000595790.5@FAM71E1	ENST00000595790.5	protein_coding	50476130,50475833,50475325,50467622,50466788	50476746,50475933,50475455,50467829,50466955	Gene ID= ENSG00000142530.10 TPM= 2.34 Transcript Type= protein_coding
chr19	50476487	50484605	50476487	50484605	+	transcript7722.chr19.nnic@EMC10	transcript7722.chr19.nnic	protein_coding	50476487,50477929,50478957,50480111,50480581,50480884,50484053	50476658,50478001,50479066,50480215,50480762,50480977,50484605	Gene ID= ENSG00000161671.16 TPM= 2.34 Transcript Type= NA
chr19	50482259	50484474	50482259	50484474	+	transcript7732.chr19.nnic@NA	transcript7732.chr19.nnic	NA	50482259	50484474	Gene ID= novel_gene_chr19_7733 TPM= 2.34 Transcript Type= NA
chr19	50505998	50511353	50505998	50511353	-	ENST00000598418.5@JOSD2	ENST00000598418.5	protein_coding	50511117,50510286,50507574,50506378,50505998	50511353,50510448,50507699,50506572,50506272	Gene ID= ENSG00000161677.11 TPM= 23.35 Transcript Type= protein_coding
chr19	50506002	50511220	50506002	50511220	-	ENST00000595669.5@JOSD2	ENST00000595669.5	protein_coding	50511117,50510286,50506378,50506002	50511220,50510448,50506572,50506272	Gene ID= ENSG00000161677.11 TPM= 7.01 Transcript Type= protein_coding
chr19	50621977	50639818	50621977	50639818	-	ENST00000600079.5@SYT3	ENST00000600079.5	protein_coding	50639790,50639025,50637264,50632286,50629784,50629294,50625897,50625393,50625162,50622687,50621977	50639818,50639162,50637426,50632811,50630171,50629512,50626017,50625564,50625294,50622755,50622481	Gene ID= ENSG00000213023.10 TPM= 4.67 Transcript Type= protein_coding
chr19	50621977	50639827	50621977	50639827	-	ENST00000593901.5@SYT3	ENST00000593901.5	protein_coding	50639790,50639025,50637264,50632286,50629784,50629294,50625897,50625393,50625162,50622687,50621977	50639827,50639162,50637790,50632811,50630171,50629512,50626017,50625564,50625294,50622755,50622481	Gene ID= ENSG00000213023.10 TPM= 1.17 Transcript Type= protein_coding
chr19	50723328	50725717	50723328	50725717	+	transcript7745.chr19.nic@CLEC11A	transcript7745.chr19.nic	protein_coding	50723328,50724410,50725022	50724091,50724601,50725717	Gene ID= ENSG00000105472.12 TPM= 2.34 Transcript Type= NA
chr19	50723329	50725717	50723329	50725717	+	ENST00000250340.8@CLEC11A	ENST00000250340.8	protein_coding	50723329,50723905,50724410,50725022	50723672,50724091,50724601,50725717	Gene ID= ENSG00000105472.12 TPM= 26.85 Transcript Type= protein_coding
chr19	50797705	50804717	50797705	50804717	-	ENST00000391812.5@C19orf48	ENST00000391812.5	protein_coding	50804572,50802454,50802217,50799294,50797705	50804717,50802614,50802257,50799357,50798958	Gene ID= ENSG00000167747.14 TPM= 6.22 Transcript Type= protein_coding
chr19	50797704	50804929	50797704	50804929	-	ENST00000641834.1@C19orf48	ENST00000641834.1	protein_coding	50804572,50802217,50799294,50797704	50804929,50802257,50799357,50798958	Gene ID= ENSG00000167747.14 TPM= 36.58 Transcript Type= processed_transcript
chr19	50797704	50804610	50797704	50804610	-	transcript7750.chr19.nic@C19orf48	transcript7750.chr19.nic	protein_coding	50804572,50802217,50797704	50804610,50802257,50799357	Gene ID= ENSG00000167747.14 TPM= 9.73 Transcript Type= NA
chr19	51012739	51020026	51012739	51020026	-	ENST00000309958.7@KLK10	ENST00000309958.7	protein_coding	51019820,51019043,51017110,51015882,51015417,51012739	51020026,51019142,51017290,51016156,51015550,51014952	Gene ID= ENSG00000129451.11 TPM= 1.17 Transcript Type= protein_coding
chr19	51022231	51026646	51022231	51026646	-	transcript7762.chr19.nic@KLK11	transcript7762.chr19.nic	protein_coding	51026538,51025592,51024634,51024045,51023092,51022231	51026646,51025666,51024794,51024310,51023228,51022697	Gene ID= ENSG00000167757.13 TPM= 5.45 Transcript Type= NA
chr19	51022233	51027703	51022233	51027703	-	ENST00000594768.5@KLK11	ENST00000594768.5	protein_coding	51027457,51025592,51024638,51024045,51023092,51022233	51027703,51025666,51024794,51024310,51023228,51022697	Gene ID= ENSG00000167757.13 TPM= 3.12 Transcript Type= protein_coding
chr19	51022236	51026614	51022236	51026614	-	ENST00000453757.7@KLK11	ENST00000453757.7	protein_coding	51026538,51025592,51024638,51024045,51023092,51022236	51026614,51025666,51024794,51024310,51023228,51022697	Gene ID= ENSG00000167757.13 TPM= 13.63 Transcript Type= protein_coding
chr19	51078910	51080790	51078910	51080790	+	transcript7768.chr19.nnic@NA	transcript7768.chr19.nnic	NA	51078910	51080790	Gene ID= novel_gene_chr19_7769 TPM= 2.34 Transcript Type= NA
chr19	51097606	51108370	51097606	51108370	-	ENST00000421832.2@CTU1	ENST00000421832.2	protein_coding	51108347,51104062,51097606	51108370,51104590,51099139	Gene ID= ENSG00000142544.6 TPM= 4.67 Transcript Type= protein_coding
chr19	51124908	51130310	51124908	51130310	+	ENST00000250360.7@SIGLEC9	ENST00000250360.7	protein_coding	51124908,51125597,51126081,51127030,51127949,51128414,51129891	51125395,51125875,51126128,51127296,51128039,51128510,51130310	Gene ID= ENSG00000129450.8 TPM= 12.84 Transcript Type= protein_coding
chr19	51124908	51136651	51124908	51136651	+	ENST00000440804.7@SIGLEC9	ENST00000440804.7	protein_coding	51124908,51125597,51126081,51127030,51127949,51128414,51135962	51125395,51125875,51126128,51127296,51128039,51128510,51136651	Gene ID= ENSG00000129450.8 TPM= 3.5 Transcript Type= protein_coding
chr19	51142301	51153526	51142301	51153526	+	ENST00000317643.10@SIGLEC7	ENST00000317643.10	protein_coding	51142301,51144406,51144912,51145855,51146754,51147221,51153063	51142802,51144684,51144959,51146121,51146850,51147317,51153526	Gene ID= ENSG00000168995.13 TPM= 14.59 Transcript Type= protein_coding
chr19	51142301	51153526	51142301	51153526	+	transcript7777.chr19.nnic@SIGLEC7	transcript7777.chr19.nnic	protein_coding	51142301,51144912,51145855,51147221,51153063	51142802,51144959,51146121,51147317,51153526	Gene ID= ENSG00000168995.13 TPM= 4.09 Transcript Type= NA
chr19	51167330	51173500	51167330	51173500	+	ENST00000611992.4@SIGLEC17P	ENST00000611992.4	transcribed_unprocessed_pseudogene	51167330,51167504,51168089,51172066,51172517,51172976	51167441,51167883,51168367,51172159,51172591,51173500	Gene ID= ENSG00000171101.13 TPM= 1.17 Transcript Type= processed_transcript
chr19	51225098	51240016	51225098	51240016	+	ENST00000262262.4@CD33	ENST00000262262.4	protein_coding	51225098,51225218,51225803,51226309,51235157,51235595,51239518	51225155,51225598,51226081,51226356,51235253,51235676,51240016	Gene ID= ENSG00000105383.14 TPM= 4.67 Transcript Type= protein_coding
chr19	51225131	51239988	51225131	51239988	+	ENST00000601785.5@CD33	ENST00000601785.5	protein_coding	51225131,51225803,51226309,51235157,51235518,51239518	51225598,51226081,51226356,51235253,51235676,51239988	Gene ID= ENSG00000105383.14 TPM= 1.17 Transcript Type= retained_intron
chr19	51345171	51366418	51345171	51366418	-	ENST00000309244.8@ETFB	ENST00000309244.8	protein_coding	51366270,51354150,51353132,51350329,51346900,51345171	51366418,51354308,51353290,51350391,51347058,51345381	Gene ID= ENSG00000105379.9 TPM= 88.74 Transcript Type= protein_coding
chr19	51371612	51372715	51371612	51372715	-	ENST00000221978.9@NKG7	ENST00000221978.9	protein_coding	51372379,51372161,51371940,51371612	51372715,51372307,51372074,51371835	Gene ID= ENSG00000105374.9 TPM= 21.02 Transcript Type= protein_coding
chr19	51388289	51390574	51388289	51390574	-	ENST00000574814.1@C19orf84	ENST00000574814.1	protein_coding	51390478,51388289	51390574,51389509	Gene ID= ENSG00000262874.1 TPM= 1.17 Transcript Type= protein_coding
chr19	51410021	51417803	51410021	51417803	-	ENST00000353836.9@SIGLEC10	ENST00000353836.9	protein_coding	51417545,51417082,51416666,51416310,51415898,51415568,51415181,51414422,51413712,51410021	51417803,51417465,51416950,51416357,51416167,51415615,51415438,51414515,51413823,51411371	Gene ID= ENSG00000142512.14 TPM= 1.75 Transcript Type= protein_coding
chr19	51410021	51417636	51410021	51417636	-	ENST00000441969.7@SIGLEC10	ENST00000441969.7	protein_coding	51417545,51417082,51416666,51416310,51415898,51415568,51415181,51414422,51413712,51410021	51417636,51417465,51416776,51416357,51416167,51415615,51415438,51414515,51413823,51411371	Gene ID= ENSG00000142512.14 TPM= 1.75 Transcript Type= protein_coding
chr19	51450997	51458454	51450997	51458454	-	ENST00000321424.7@SIGLEC8	ENST00000321424.7	protein_coding	51457934,51457461,51457184,51455418,51454684,51454219,51450997	51458454,51457739,51457231,51455687,51454780,51454315,51452633	Gene ID= ENSG00000105366.15 TPM= 2.34 Transcript Type= protein_coding
chr19	51450997	51458454	51450997	51458454	-	transcript7809.chr19.nic@SIGLEC8	transcript7809.chr19.nic	protein_coding	51457934,51455418,51454684,51454219,51450997	51458454,51455687,51454780,51454315,51452633	Gene ID= ENSG00000105366.15 TPM= 3.5 Transcript Type= NA
chr19	51491193	51501801	51491193	51501801	-	transcript7810.chr19.nnic@SIGLEC12	transcript7810.chr19.nnic	protein_coding	51501307,51499920,51499438,51499170,51498018,51497349,51496880,51491193	51501801,51500400,51499716,51499217,51498287,51497445,51496976,51491829	Gene ID= ENSG00000254521.6 TPM= 2.34 Transcript Type= NA
chr19	51491364	51501789	51491364	51501789	-	ENST00000291707.7@SIGLEC12	ENST00000291707.7	protein_coding	51501307,51499920,51499438,51499170,51498018,51497349,51496880,51491364	51501789,51500300,51499716,51499217,51498287,51497445,51496976,51491829	Gene ID= ENSG00000254521.6 TPM= 3.5 Transcript Type= protein_coding
chr19	51589692	51594396	51589692	51594396	-	transcript7818.chr19.nnic@NA	transcript7818.chr19.nnic	NA	51593949,51589692	51594396,51593051	Gene ID= novel_gene_chr19_7819 TPM= 2.34 Transcript Type= NA
chr19	51594561	51601788	51594561	51601788	+	ENST00000598755.1@AC018755.3	ENST00000598755.1	transcribed_processed_pseudogene	51594561,51601211	51594646,51601788	Gene ID= ENSG00000269388.1 TPM= 1.17 Transcript Type= processed_transcript
chr19	51610960	51630450	51610960	51630450	-	transcript7821.chr19.nic@SIGLEC5	transcript7821.chr19.nic	protein_coding	51630299,51629833,51629358,51629038,51627834,51627462,51627149,51626032,51610960	51630450,51630216,51629636,51629076,51628091,51627746,51627248,51626113,51612422	Gene ID= ENSG00000105501.12 TPM= 8.17 Transcript Type= NA
chr19	51611927	51645545	51611927	51645545	-	ENST00000534261.3@SIGLEC5	ENST00000534261.3	protein_coding	51645477,51630299,51629833,51629358,51629038,51627834,51627462,51627149,51626032,51611927	51645545,51630666,51630216,51629636,51629076,51628091,51627746,51627248,51626113,51612422	Gene ID= ENSG00000105501.12 TPM= 10.51 Transcript Type= protein_coding
chr19	51640281	51643043	51640281	51643043	+	transcript7829.chr19.nnic@NA	transcript7829.chr19.nnic	NA	51640281	51643043	Gene ID= novel_gene_chr19_7830 TPM= 30.36 Transcript Type= NA
chr19	51642556	51646820	51642556	51646820	-	transcript7827.chr19.nnic@SIGLEC14	transcript7827.chr19.nnic	protein_coding	51646723,51646257,51645782,51645477,51643615,51642556	51646820,51646640,51646060,51645530,51644036,51643459	Gene ID= ENSG00000254415.3 TPM= 4.67 Transcript Type= NA
chr19	51642553	51646801	51642553	51646801	-	ENST00000360844.6@SIGLEC14	ENST00000360844.6	protein_coding	51646723,51646257,51645782,51645477,51643779,51643537,51642553	51646801,51646640,51646060,51645530,51644036,51643672,51643397	Gene ID= ENSG00000254415.3 TPM= 2.34 Transcript Type= protein_coding
chr19	51689389	51705190	51689389	51705190	+	transcript7833.chr19.nnic@SPACA6	transcript7833.chr19.nnic	protein_coding	51689389,51694478,51701658,51702629,51703021,51703228,51704030,51704270,51705090	51689582,51694555,51701726,51702652,51703098,51703335,51704186,51704480,51705190	Gene ID= ENSG00000182310.13 TPM= 8.17 Transcript Type= NA
chr19	51713112	51723994	51713112	51723994	-	ENST00000540069.6@HAS1	ENST00000540069.6	protein_coding	51723925,51719206,51716968,51716256,51713112	51723994,51719895,51717193,51716388,51714102	Gene ID= ENSG00000105509.10 TPM= 7.01 Transcript Type= protein_coding
chr19	51745172	51751893	51745172	51751893	-	ENST00000595042.5@FPR1	ENST00000595042.5	protein_coding	51751814,51750203,51745172	51751893,51750253,51747005	Gene ID= ENSG00000171051.8 TPM= 5.84 Transcript Type= protein_coding
chr19	51760851	51770526	51760851	51770526	+	ENST00000340023.6@FPR2	ENST00000340023.6	protein_coding	51760851,51768645	51761230,51770526	Gene ID= ENSG00000171049.8 TPM= 10.51 Transcript Type= protein_coding
chr19	51795163	51826189	51795163	51826189	+	ENST00000339223.4@FPR3	ENST00000339223.4	protein_coding	51795163,51823739	51795331,51826189	Gene ID= ENSG00000187474.4 TPM= 10.51 Transcript Type= protein_coding
chr19	51889224	51905011	51889224	51905011	-	ENST00000354957.7@ZNF649	ENST00000354957.7	protein_coding	51904914,51900093,51896852,51896472,51889224	51905011,51900294,51896978,51896567,51891897	Gene ID= ENSG00000198093.10 TPM= 10.51 Transcript Type= protein_coding
chr19	51927220	51946623	51927220	51946623	+	ENST00000293471.10@ZNF613	ENST00000293471.10	protein_coding	51927220,51929732,51936028,51940209,51940617,51944119	51927540,51929896,51936235,51940335,51940709,51946623	Gene ID= ENSG00000176024.17 TPM= 7.01 Transcript Type= protein_coding
chr19	51964343	51986826	51964343	51986826	-	ENST00000243644.8@ZNF350	ENST00000243644.8	protein_coding	51986770,51974346,51969005,51968578,51964343	51986826,51974531,51969131,51968673,51966214	Gene ID= ENSG00000256683.6 TPM= 12.84 Transcript Type= protein_coding
chr19	51991334	52008196	51991334	52008196	-	ENST00000594083.5@ZNF615	ENST00000594083.5	protein_coding	52008141,52003697,52002155,52001813,52000346,51991334	52008196,52003900,52002281,52001908,52000378,51994837	Gene ID= ENSG00000197619.13 TPM= 4.67 Transcript Type= protein_coding
chr19	52013325	52028570	52013325	52028570	-	ENST00000270649.10@ZNF614	ENST00000270649.10	protein_coding	52028242,52025731,52018368,52018008,52013325	52028570,52025961,52018494,52018103,52017359	Gene ID= ENSG00000142556.18 TPM= 15.18 Transcript Type= protein_coding
chr19	52033420	52048820	52033420	52048820	-	ENST00000221315.9@ZNF432	ENST00000221315.9	protein_coding	52048695,52046854,52041480,52040488,52033420	52048820,52047060,52041606,52040583,52035440	Gene ID= ENSG00000256087.6 TPM= 2.34 Transcript Type= protein_coding
chr19	52113091	52139917	52113091	52139917	-	ENST00000600228.5@ZNF616	ENST00000600228.5	protein_coding	52139732,52130501,52123923,52113091	52139917,52130588,52124049,52117024	Gene ID= ENSG00000204611.6 TPM= 3.5 Transcript Type= protein_coding
chr19	52190060	52226417	52190060	52226417	+	transcript7902.chr19.nic@PPP2R1A	transcript7902.chr19.nic	protein_coding	52190060,52201944,52205963,52211260,52212686,52212955,52215779,52216004,52216529,52219691,52220189,52220979,52222099,52225717,52225965	52190294,52202034,52206063,52211492,52212833,52213110,52215893,52216074,52216663,52219864,52220249,52221133,52222241,52225808,52226417	Gene ID= ENSG00000105568.17 TPM= 81.73 Transcript Type= NA
chr19	52269587	52292719	52269587	52292719	+	transcript7908.chr19.nnic@ZNF766	transcript7908.chr19.nnic	protein_coding	52269587,52282111,52283285,52290066,52291763	52269631,52282237,52283413,52291612,52292719	Gene ID= ENSG00000196214.10 TPM= 4.67 Transcript Type= NA
chr19	52269571	52296046	52269571	52296046	+	ENST00000439461.5@ZNF766	ENST00000439461.5	protein_coding	52269571,52282111,52283285,52290066	52269631,52282237,52283413,52296046	Gene ID= ENSG00000196214.10 TPM= 30.36 Transcript Type= protein_coding
chr19	52269587	52292716	52269587	52292716	+	transcript7912.chr19.nic@ZNF766	transcript7912.chr19.nic	protein_coding	52269587,52282111,52290066	52269631,52283413,52292716	Gene ID= ENSG00000196214.10 TPM= 2.34 Transcript Type= NA
chr19	52336308	52367113	52336308	52367113	+	ENST00000403906.7@ZNF610	ENST00000403906.7	protein_coding	52336308,52347707,52349154,52353682,52354251,52365698	52336506,52347944,52349235,52353808,52354379,52367113	Gene ID= ENSG00000167554.14 TPM= 2.34 Transcript Type= protein_coding
chr19	52369921	52386188	52369921	52386188	+	transcript7921.chr19.nnic@ZNF880	transcript7921.chr19.nnic	protein_coding	52369921,52373111,52374299,52383849,52384780	52369977,52373237,52374427,52384605,52386188	Gene ID= ENSG00000221923.8 TPM= 5.84 Transcript Type= NA
chr19	52369951	52385795	52369951	52385795	+	ENST00000422689.2@ZNF880	ENST00000422689.2	protein_coding	52369951,52373111,52374299,52383849	52369977,52373237,52374427,52385795	Gene ID= ENSG00000221923.8 TPM= 4.67 Transcript Type= protein_coding
chr19	52369939	52374717	52369939	52374717	+	ENST00000344085.9@ZNF880	ENST00000344085.9	protein_coding	52369939,52373111,52374299,52374484	52369977,52373237,52374394,52374717	Gene ID= ENSG00000221923.8 TPM= 1.17 Transcript Type= protein_coding
chr19	52376511	52381461	52376511	52381461	-	transcript7936.chr19.nnic@NA	transcript7936.chr19.nnic	NA	52376511	52381461	Gene ID= novel_gene_chr19_7937 TPM= 2.34 Transcript Type= NA
chr19	52397868	52418404	52397868	52418404	+	ENST00000360465.7@ZNF528	ENST00000360465.7	protein_coding	52397868,52398367,52401685,52401947,52405907,52406515,52415124	52397904,52398619,52401753,52402028,52406033,52406643,52418404	Gene ID= ENSG00000167555.13 TPM= 1.17 Transcript Type= protein_coding
chr19	52570275	52584566	52570275	52584566	+	ENST00000391785.7@ZNF701	ENST00000391785.7	protein_coding	52570275,52574077,52575895,52582202	52570330,52574162,52576021,52584566	Gene ID= ENSG00000167562.12 TPM= 4.67 Transcript Type= protein_coding
chr19	52558269	52559498	52558269	52559498	+	transcript7947.chr19.nnic@NA	transcript7947.chr19.nnic	NA	52558269	52559498	Gene ID= novel_gene_chr19_7948 TPM= 2.34 Transcript Type= NA
chr19	52567056	52568744	52567056	52568744	+	transcript7945.chr19.nnic@NA	transcript7945.chr19.nnic	NA	52567056	52568744	Gene ID= novel_gene_chr19_7946 TPM= 3.5 Transcript Type= NA
chr19	52612377	52690569	52612377	52690569	-	transcript7950.chr19.nnic@ZNF83	transcript7950.chr19.nnic	protein_coding	52690443,52660762,52655561,52635066,52618936,52613769,52612377	52690569,52660843,52655687,52635153,52619062,52614797,52613685	Gene ID= ENSG00000167766.18 TPM= 4.67 Transcript Type= NA
chr19	52612378	52618040	52612378	52618040	-	ENST00000541777.6@ZNF83	ENST00000541777.6	protein_coding	52616718,52612378	52618040,52614797	Gene ID= ENSG00000167766.18 TPM= 18.68 Transcript Type= protein_coding
chr19	52647305	52650137	52647305	52650137	-	transcript7966.chr19.nnic@NA	transcript7966.chr19.nnic	NA	52647305	52650137	Gene ID= novel_gene_chr19_7967 TPM= 2.34 Transcript Type= NA
chr19	52703590	52735054	52703590	52735054	-	transcript7972.chr19.nic@ZNF611	transcript7972.chr19.nic	protein_coding	52735001,52728730,52715832,52714015,52707469,52703590	52735054,52728831,52715913,52714141,52707538,52706864	Gene ID= ENSG00000213020.9 TPM= 2.34 Transcript Type= NA
chr19	52702813	52735054	52702813	52735054	-	ENST00000540744.5@ZNF611	ENST00000540744.5	protein_coding	52735001,52728730,52715832,52714015,52702813	52735054,52728831,52715913,52714141,52706864	Gene ID= ENSG00000213020.9 TPM= 3.5 Transcript Type= protein_coding
chr19	52765500	52786783	52765500	52786783	-	transcript7974.chr19.nnic@ZNF600	transcript7974.chr19.nnic	protein_coding	52786595,52781317,52780581,52778826,52774575,52765500	52786783,52781464,52781055,52778907,52774701,52767772	Gene ID= ENSG00000189190.9 TPM= 2.72 Transcript Type= NA
chr19	52765500	52786778	52765500	52786778	-	transcript7982.chr19.nnic@ZNF600	transcript7982.chr19.nnic	protein_coding	52786595,52780581,52778826,52774575,52765500	52786778,52780725,52778907,52774701,52767772	Gene ID= ENSG00000189190.9 TPM= 2.72 Transcript Type= NA
chr19	52765500	52786817	52765500	52786817	-	transcript7991.chr19.nnic@ZNF600	transcript7991.chr19.nnic	protein_coding	52786595,52778826,52774575,52765500	52786817,52778907,52774701,52767772	Gene ID= ENSG00000189190.9 TPM= 3.89 Transcript Type= NA
chr19	52796945	52821634	52796945	52821634	-	transcript7984.chr19.nic@ZNF28	transcript7984.chr19.nic	protein_coding	52821586,52817944,52808007,52805145,52796945	52821634,52818031,52808133,52805262,52801702	Gene ID= ENSG00000198538.10 TPM= 3.5 Transcript Type= NA
chr19	52797409	52821632	52797409	52821632	-	ENST00000457749.6@ZNF28	ENST00000457749.6	protein_coding	52821586,52817944,52808007,52797409	52821632,52818031,52808133,52801702	Gene ID= ENSG00000198538.10 TPM= 4.67 Transcript Type= protein_coding
chr19	52797408	52821634	52797408	52821634	-	transcript7999.chr19.nnic@ZNF28	transcript7999.chr19.nnic	protein_coding	52821586,52817944,52797408	52821634,52818031,52801660	Gene ID= ENSG00000198538.10 TPM= 2.34 Transcript Type= NA
chr19	52814284	52818028	52814284	52818028	-	ENST00000542421.1@ZNF28	ENST00000542421.1	protein_coding	52817944,52814284	52818028,52814426	Gene ID= ENSG00000198538.10 TPM= 1.17 Transcript Type= processed_transcript
chr19	52838535	52857648	52838535	52857648	-	transcript7987.chr19.nic@ZNF468	transcript7987.chr19.nic	protein_coding	52857572,52854258,52853872,52849087,52838535	52857648,52854345,52854126,52849213,52842151	Gene ID= ENSG00000204604.9 TPM= 10.51 Transcript Type= NA
chr19	52838536	52857649	52838536	52857649	-	ENST00000243639.8@ZNF468	ENST00000243639.8	protein_coding	52857572,52854258,52849087,52845179,52838536	52857649,52854345,52849213,52845296,52842151	Gene ID= ENSG00000204604.9 TPM= 4.67 Transcript Type= protein_coding
chr19	52904417	52923481	52904417	52923481	-	ENST00000638862.1@ZNF888	ENST00000638862.1	protein_coding	52923369,52918819,52917859,52915196,52904417	52923481,52918937,52917931,52915322,52908179	Gene ID= ENSG00000213793.5 TPM= 3.5 Transcript Type= protein_coding
chr19	52949442	52962882	52949442	52962882	-	ENST00000444460.6@ZNF816	ENST00000444460.6	protein_coding	52962727,52956027,52952751,52949442	52962882,52956104,52952877,52951584	Gene ID= ENSG00000180257.13 TPM= 3.5 Transcript Type= protein_coding
chr19	52968251	52993524	52968251	52993524	-	ENST00000270443.8@ZNF702P	ENST00000270443.8	transcribed_processed_pseudogene	52993480,52986575,52980892,52968251	52993524,52986846,52980972,52970842	Gene ID= ENSG00000242779.6 TPM= 3.5 Transcript Type= processed_transcript
chr19	53066614	53103464	53066614	53103464	-	transcript8039.chr19.nnic@ZNF160	transcript8039.chr19.nnic	protein_coding	53103265,53091637,53091413,53086262,53085163,53075057,53074140,53066614	53103464,53091720,53091529,53086321,53085218,53075183,53074268,53070262	Gene ID= ENSG00000170949.17 TPM= 6.36 Transcript Type= NA
chr19	53066614	53103464	53066614	53103464	-	transcript8048.chr19.nic@ZNF160	transcript8048.chr19.nic	protein_coding	53103265,53091637,53091413,53086262,53075057,53074140,53066614	53103464,53091720,53091553,53086321,53075183,53074268,53070262	Gene ID= ENSG00000170949.17 TPM= 4.03 Transcript Type= NA
chr19	53066614	53103464	53066614	53103464	-	transcript8055.chr19.nic@ZNF160	transcript8055.chr19.nic	protein_coding	53103265,53091413,53086262,53075057,53074140,53066614	53103464,53091720,53086321,53075183,53074268,53070262	Gene ID= ENSG00000170949.17 TPM= 5.2 Transcript Type= NA
chr19	53066614	53103464	53066614	53103464	-	transcript8059.chr19.nnic@ZNF160	transcript8059.chr19.nnic	protein_coding	53103265,53091637,53086262,53075057,53066614	53103464,53091720,53086321,53075183,53070262	Gene ID= ENSG00000170949.17 TPM= 2.57 Transcript Type= NA
chr19	53066614	53103434	53066614	53103434	-	ENST00000429604.5@ZNF160	ENST00000429604.5	protein_coding	53103265,53091637,53091413,53086262,53075057,53074140,53066614	53103434,53091720,53091529,53086321,53075183,53074268,53070262	Gene ID= ENSG00000170949.17 TPM= 4.03 Transcript Type= protein_coding
chr19	53072886	53103403	53072886	53103403	-	ENST00000355147.9@ZNF160	ENST00000355147.9	protein_coding	53103265,53091637,53091413,53086262,53075057,53074140,53072886	53103403,53091720,53091553,53086321,53075183,53074268,53073509	Gene ID= ENSG00000170949.17 TPM= 1.17 Transcript Type= protein_coding
chr19	53107880	53132918	53107880	53132918	-	ENST00000421033.5@ZNF415	ENST00000421033.5	protein_coding	53132749,53122662,53116313,53107880	53132918,53122743,53116433,53109908	Gene ID= ENSG00000170954.11 TPM= 1.17 Transcript Type= protein_coding
chr19	53138705	53159060	53138705	53159060	-	ENST00000452676.6@ZNF347	ENST00000452676.6	protein_coding	53158680,53153733,53149241,53148681,53138705	53159060,53153793,53149367,53148812,53142556	Gene ID= ENSG00000197937.12 TPM= 3.5 Transcript Type= protein_coding
chr19	53152790	53155031	53152790	53155031	+	transcript8067.chr19.nnic@NA	transcript8067.chr19.nnic	NA	53152790	53155031	Gene ID= novel_gene_chr19_8068 TPM= 2.34 Transcript Type= NA
chr19	53235381	53254858	53235381	53254858	-	ENST00000598513.5@ZNF677	ENST00000598513.5	protein_coding	53254834,53253086,53251536,53243744,53235381	53254858,53253156,53251605,53243897,53238557	Gene ID= ENSG00000197928.10 TPM= 2.34 Transcript Type= protein_coding
chr19	53333749	53354869	53333749	53354869	+	ENST00000458035.1@ZNF845	ENST00000458035.1	protein_coding	53333749,53341235,53345506,53350818	53333792,53341322,53345632,53354869	Gene ID= ENSG00000213799.11 TPM= 8.17 Transcript Type= protein_coding
chr19	53365720	53386581	53365720	53386581	+	transcript8113.chr19.nnic@ZNF525	transcript8113.chr19.nnic	protein_coding	53365720,53372215,53380722	53365759,53372296,53386581	Gene ID= ENSG00000203326.11 TPM= 2.34 Transcript Type= NA
chr19	53395150	53412007	53395150	53412007	+	ENST00000396408.7@ZNF765	ENST00000396408.7	protein_coding	53395150,53397943,53402065,53407698	53395193,53398030,53402191,53412007	Gene ID= ENSG00000196417.12 TPM= 9.34 Transcript Type= protein_coding
chr19	53431975	53458250	53431975	53458250	+	transcript8088.chr19.nnic@ZNF761	transcript8088.chr19.nnic	protein_coding	53431975,53445001,53446227,53447196,53449512,53451774,53454650	53432028,53445123,53446337,53447283,53449638,53451864,53458250	Gene ID= ENSG00000160336.14 TPM= 2.34 Transcript Type= NA
chr19	53431975	53458260	53431975	53458260	+	transcript8089.chr19.nic@ZNF761	transcript8089.chr19.nic	protein_coding	53431975,53445001,53446227,53447196,53449512,53454650	53432028,53445123,53446337,53447283,53449638,53458260	Gene ID= ENSG00000160336.14 TPM= 3.5 Transcript Type= NA
chr19	53431983	53458260	53431983	53458260	+	transcript8102.chr19.nnic@ZNF761	transcript8102.chr19.nnic	protein_coding	53431983,53446227,53447196,53449512,53454650	53432028,53446337,53447283,53449638,53458260	Gene ID= ENSG00000160336.14 TPM= 3.5 Transcript Type= NA
chr19	53431984	53444670	53431984	53444670	+	ENST00000424846.3@TPM3P9	ENST00000424846.3	transcribed_processed_pseudogene	53431984,53441796	53432028,53444670	Gene ID= ENSG00000241015.2 TPM= 3.5 Transcript Type= processed_transcript
chr19	53467735	53496255	53467735	53496255	+	ENST00000396403.8@ZNF813	ENST00000396403.8	protein_coding	53467735,53483750,53486632,53490375	53467789,53483837,53486758,53496255	Gene ID= ENSG00000198346.10 TPM= 1.17 Transcript Type= protein_coding
chr19	53521024	53580269	53521024	53580269	+	ENST00000253144.13@ZNF331	ENST00000253144.13	protein_coding	53521024,53522617,53539216,53555845,53569304,53571604,53576697	53522084,53522684,53539282,53555908,53569385,53571730,53580269	Gene ID= ENSG00000130844.16 TPM= 10.51 Transcript Type= protein_coding
chr19	53538079	53578386	53538079	53578386	+	ENST00000411977.6@ZNF331	ENST00000411977.6	protein_coding	53538079,53539216,53555845,53569304,53571604,53576697	53538296,53539282,53555908,53569385,53571730,53578386	Gene ID= ENSG00000130844.16 TPM= 3.5 Transcript Type= protein_coding
chr19	53554530	53578389	53554530	53578389	+	ENST00000512387.5@ZNF331	ENST00000512387.5	protein_coding	53554530,53555845,53569304,53571604,53576697	53554693,53555908,53569385,53571730,53578389	Gene ID= ENSG00000130844.16 TPM= 2.34 Transcript Type= protein_coding
chr19	53793603	53824343	53793603	53824343	-	ENST00000324134.10@NLRP12	ENST00000324134.10	protein_coding	53823886,53814908,53809587,53807495,53805280,53803952,53801227,53798243,53795859,53793603	53824343,53814988,53811288,53807665,53805450,53804122,53801397,53798413,53796029,53794136	Gene ID= ENSG00000142405.21 TPM= 1.17 Transcript Type= protein_coding
chr19	53867880	53876435	53867880	53876435	+	transcript8150.chr19.nnic@MYADM	transcript8150.chr19.nnic	protein_coding	53867880,53869754,53873528,53875813	53867943,53869838,53874811,53876435	Gene ID= ENSG00000179820.15 TPM= 35.03 Transcript Type= NA
chr19	53867883	53876437	53867883	53876437	+	ENST00000391770.8@MYADM	ENST00000391770.8	protein_coding	53867883,53869754,53873528	53867943,53869838,53876437	Gene ID= ENSG00000179820.15 TPM= 50.79 Transcript Type= protein_coding
chr19	53867883	53876428	53867883	53876428	+	ENST00000391771.1@MYADM	ENST00000391771.1	protein_coding	53867883,53869690,53873528	53867943,53869838,53876428	Gene ID= ENSG00000179820.15 TPM= 39.11 Transcript Type= protein_coding
chr19	54040825	54063953	54040825	54063953	-	ENST00000338372.6@VSTM1	ENST00000338372.6	protein_coding	54063744,54058697,54058306,54051410,54042277,54042169,54041916,54041779,54040825	54063953,54058732,54058590,54051448,54042369,54042196,54041953,54041816,54041080	Gene ID= ENSG00000189068.9 TPM= 1.17 Transcript Type= protein_coding
chr19	54094670	54102686	54094670	54102686	-	ENST00000617140.4@OSCAR	ENST00000617140.4	protein_coding	54102654,54100756,54099748,54099590,54096862,54095872,54094670	54102686,54100951,54099780,54099601,54097164,54096153,54095357	Gene ID= ENSG00000170909.13 TPM= 3.34 Transcript Type= protein_coding
chr19	54094670	54102686	54094670	54102686	-	ENST00000611261.4@OSCAR	ENST00000611261.4	protein_coding	54102654,54100756,54099748,54099590,54096862,54094670	54102686,54100951,54099780,54099601,54097164,54096153	Gene ID= ENSG00000170909.13 TPM= 9.47 Transcript Type= protein_coding
chr19	54094670	54102692	54094670	54102692	-	ENST00000284648.10@OSCAR	ENST00000284648.10	protein_coding	54102654,54100756,54099748,54096862,54094670	54102692,54100951,54099780,54097164,54096153	Gene ID= ENSG00000170909.13 TPM= 33.99 Transcript Type= protein_coding
chr19	54094670	54102686	54094670	54102686	-	ENST00000616215.4@OSCAR	ENST00000616215.4	protein_coding	54102654,54100756,54096862,54094670	54102686,54100951,54097164,54096153	Gene ID= ENSG00000170909.13 TPM= 15.31 Transcript Type= protein_coding
chr19	54094670	54097890	54094670	54097890	-	transcript8183.chr19.nic@OSCAR	transcript8183.chr19.nic	protein_coding	54096862,54095872,54094670	54097890,54096153,54095357	Gene ID= ENSG00000170909.13 TPM= 8.01 Transcript Type= NA
chr19	54094668	54097890	54094668	54097890	-	transcript8184.chr19.nic@OSCAR	transcript8184.chr19.nic	protein_coding	54096862,54094668	54097890,54096153	Gene ID= ENSG00000170909.13 TPM= 9.63 Transcript Type= NA
chr19	54094670	54100838	54094670	54100838	-	ENST00000358375.8@OSCAR	ENST00000358375.8	protein_coding	54100756,54099748,54096862,54095872,54094670	54100838,54099780,54097164,54096153,54095357	Gene ID= ENSG00000170909.13 TPM= 12.68 Transcript Type= protein_coding
chr19	54094670	54100857	54094670	54100857	-	ENST00000351806.8@OSCAR	ENST00000351806.8	protein_coding	54100756,54096862,54095872,54094670	54100857,54097164,54096153,54095357	Gene ID= ENSG00000170909.13 TPM= 5.67 Transcript Type= protein_coding
chr19	54099815	54100846	54099815	54100846	-	transcript8185.chr19.nnic@NA	transcript8185.chr19.nnic	NA	54099815	54100846	Gene ID= novel_gene_chr19_8186 TPM= 3.5 Transcript Type= NA
chr19	54102869	54106965	54102869	54106965	+	ENST00000391763.3@NDUFA3	ENST00000391763.3	protein_coding	54102869,54103114,54105934,54106811	54102898,54103188,54106011,54106965	Gene ID= ENSG00000170906.15 TPM= 98.66 Transcript Type= protein_coding
chr19	54102852	54106961	54102852	54106961	+	ENST00000391762.5@NDUFA3	ENST00000391762.5	protein_coding	54102852,54103114,54105934,54106353,54106811	54102888,54103188,54106011,54106446,54106961	Gene ID= ENSG00000170906.15 TPM= 20.43 Transcript Type= protein_coding
chr19	54107013	54115675	54107013	54115675	-	ENST00000391759.5@TFPT	ENST00000391759.5	protein_coding	54115247,54114442,54110051,54108326,54108026,54107013	54115675,54114700,54110121,54108395,54108244,54107169	Gene ID= ENSG00000105619.13 TPM= 23.35 Transcript Type= protein_coding
chr19	54115457	54131709	54115457	54131709	+	ENST00000321030.8@PRPF31	ENST00000321030.8	protein_coding	54115457,54118271,54118573,54121860,54122497,54123454,54123749,54124499,54126528,54128073,54128305,54129057,54129272,54131307	54115797,54118455,54118633,54121943,54122594,54123560,54123918,54124656,54126617,54128200,54128377,54129185,54129370,54131709	Gene ID= ENSG00000105618.13 TPM= 94.58 Transcript Type= protein_coding
chr19	54137728	54155681	54137728	54155681	+	ENST00000221232.9@CNOT3	ENST00000221232.9	protein_coding	54137728,54142929,54143119,54143442,54143660,54144006,54144237,54145598,54145910,54146601,54148148,54148620,54149560,54152226,54152428,54152867,54153715,54155309	54137993,54143003,54143186,54143516,54143749,54144134,54144332,54145817,54146043,54146657,54148535,54148743,54149758,54152325,54152626,54152999,54153840,54155681	Gene ID= ENSG00000088038.17 TPM= 24.52 Transcript Type= protein_coding
chr19	54155161	54159882	54155161	54159882	-	ENST00000222224.3@LENG1	ENST00000222224.3	protein_coding	54159564,54158282,54156763,54155161	54159882,54158461,54157025,54155940	Gene ID= ENSG00000105617.3 TPM= 17.51 Transcript Type= protein_coding
chr19	54160108	54173171	54160108	54173171	-	ENST00000619895.4@TMC4	ENST00000619895.4	protein_coding	54173039,54171870,54169512,54168448,54168171,54165419,54164434,54163724,54163033,54162673,54162102,54161130,54160878,54160467,54160108	54173171,54172083,54169660,54168680,54168292,54165566,54164601,54163887,54163159,54162770,54162285,54161260,54161033,54160545,54160374	Gene ID= ENSG00000167608.11 TPM= 45.54 Transcript Type= protein_coding
chr19	54173415	54189815	54173415	54189815	-	ENST00000245615.5@MBOAT7	ENST00000245615.5	protein_coding	54189338,54188433,54188217,54187161,54183521,54180773,54178765,54173415	54189815,54188511,54188346,54187287,54183680,54181133,54178941,54174431	Gene ID= ENSG00000125505.16 TPM= 90.4 Transcript Type= protein_coding
chr19	54173413	54189882	54173413	54189882	-	ENST00000431666.6@MBOAT7	ENST00000431666.6	protein_coding	54189338,54188433,54188217,54183521,54180773,54178765,54173413	54189882,54188511,54188346,54183680,54181133,54178941,54174431	Gene ID= ENSG00000125505.16 TPM= 37.56 Transcript Type= protein_coding
chr19	54173415	54189441	54173415	54189441	-	transcript8204.chr19.nic@MBOAT7	transcript8204.chr19.nic	protein_coding	54189338,54188433,54188217,54187161,54183521,54178765,54173415	54189441,54188511,54188346,54187287,54183680,54181133,54174431	Gene ID= ENSG00000125505.16 TPM= 18.59 Transcript Type= NA
chr19	54189451	54193666	54189451	54193666	+	transcript8209.chr19.nnic@TSEN34	transcript8209.chr19.nnic	protein_coding	54189451,54191361,54191721,54192116,54193175	54189596,54191607,54191964,54192373,54193666	Gene ID= ENSG00000170892.10 TPM= 3.97 Transcript Type= NA
chr19	54189978	54193666	54189978	54193666	+	transcript8210.chr19.nic@TSEN34	transcript8210.chr19.nic	protein_coding	54189978,54191361,54191721,54192116,54193175	54190162,54191607,54191964,54192373,54193666	Gene ID= ENSG00000170892.10 TPM= 6.31 Transcript Type= NA
chr19	54190241	54193666	54190241	54193666	+	transcript8211.chr19.nic@TSEN34	transcript8211.chr19.nic	protein_coding	54190241,54191361,54191721,54192116,54193175	54190371,54191607,54191964,54192373,54193666	Gene ID= ENSG00000170892.10 TPM= 5.14 Transcript Type= NA
chr19	54190268	54194536	54190268	54194536	+	ENST00000302937.8@TSEN34	ENST00000302937.8	protein_coding	54190268,54191361,54191721,54192116,54193175	54190450,54191607,54191964,54192373,54194536	Gene ID= ENSG00000170892.10 TPM= 2.34 Transcript Type= protein_coding
chr19	54190731	54193666	54190731	54193666	+	ENST00000396383.5@TSEN34	ENST00000396383.5	protein_coding	54190731,54191361,54191721,54192116,54193175	54191037,54191607,54191964,54192373,54193666	Gene ID= ENSG00000170892.10 TPM= 2.8 Transcript Type= protein_coding
chr19	54191253	54193666	54191253	54193666	+	ENST00000396388.2@TSEN34	ENST00000396388.2	protein_coding	54191253,54191721,54192116,54193175	54191607,54191964,54192373,54193666	Gene ID= ENSG00000170892.10 TPM= 49.51 Transcript Type= protein_coding
chr19	54200742	54207647	54200742	54207647	+	ENST00000302907.8@RPS9	ENST00000302907.8	protein_coding	54200742,54201160,54201487,54206276,54207398	54200888,54201281,54201609,54206462,54207647	Gene ID= ENSG00000170889.13 TPM= 466.14 Transcript Type= protein_coding
chr19	54200872	54207647	54200872	54207647	+	ENST00000391752.5@RPS9	ENST00000391752.5	protein_coding	54200872,54201160,54201487,54206276,54207398	54200961,54201281,54201609,54206462,54207647	Gene ID= ENSG00000170889.13 TPM= 66.82 Transcript Type= protein_coding
chr19	54200872	54207647	54200872	54207647	+	ENST00000445961.5@RPS9	ENST00000445961.5	protein_coding	54200872,54201160,54201487,54206276,54206553,54207398	54200961,54201281,54201609,54206462,54206724,54207647	Gene ID= ENSG00000170889.13 TPM= 22.85 Transcript Type= nonsense_mediated_decay
chr19	54200879	54207644	54200879	54207644	+	ENST00000495002.5@RPS9	ENST00000495002.5	protein_coding	54200879,54201160,54201487,54206276,54207398	54200893,54201281,54201609,54206724,54207644	Gene ID= ENSG00000170889.13 TPM= 17.01 Transcript Type= retained_intron
chr19	54201133	54207647	54201133	54207647	+	ENST00000391753.6@RPS9	ENST00000391753.6	protein_coding	54201133,54201487,54206276,54207398	54201281,54201609,54206462,54207647	Gene ID= ENSG00000170889.13 TPM= 58.65 Transcript Type= protein_coding
chr19	54201160	54207630	54201160	54207630	+	ENST00000441429.1@RPS9	ENST00000441429.1	protein_coding	54201160,54201487,54206276	54201281,54201609,54207630	Gene ID= ENSG00000170889.13 TPM= 4.87 Transcript Type= protein_coding
chr19	54216135	54242830	54216135	54242830	-	transcript8232.chr19.nnic@LILRA6	transcript8232.chr19.nnic	protein_coding	54242718,54242519,54242026,54241576,54240831,54240274,54239901,54219129,54218763,54218645,54218361,54217319,54216135	54242830,54242554,54242310,54241878,54241127,54240576,54239951,54219245,54218838,54218682,54218413,54217474,54217239	Gene ID= ENSG00000244482.10 TPM= 4.83 Transcript Type= NA
chr19	54236592	54242894	54236592	54242894	-	transcript8246.chr19.nic@LILRA6	transcript8246.chr19.nic	protein_coding	54242718,54242519,54242026,54241576,54240831,54240274,54239901,54238486,54236592	54242894,54242554,54242310,54241878,54241127,54240576,54239951,54239089,54237193	Gene ID= ENSG00000244482.10 TPM= 3.67 Transcript Type= NA
chr19	54216884	54242820	54216884	54242820	-	transcript8225.chr19.nnic@LILRB3	transcript8225.chr19.nnic	protein_coding	54242718,54242519,54242026,54241576,54240831,54240348,54220528,54220155,54219869,54219129,54218763,54218645,54218361,54217319,54216884	54242820,54242554,54242310,54241878,54241127,54240576,54220601,54220205,54219919,54219245,54218838,54218682,54218413,54217474,54217239	Gene ID= ENSG00000204577.11 TPM= 3.67 Transcript Type= NA
chr19	54216278	54242824	54216278	54242824	-	transcript8227.chr19.nnic@LILRB3	transcript8227.chr19.nnic	protein_coding	54242718,54242519,54242026,54241576,54240831,54240348,54220528,54220155,54219129,54218763,54218645,54218361,54217319,54216278	54242824,54242554,54242310,54241878,54241127,54240576,54220601,54220205,54219245,54218838,54218682,54218413,54217474,54217239	Gene ID= ENSG00000204577.11 TPM= 8.34 Transcript Type= NA
chr19	54216884	54219856	54216884	54219856	-	transcript8256.chr19.nic@LILRB3	transcript8256.chr19.nic	protein_coding	54219129,54218763,54218645,54218361,54217319,54216884	54219856,54218866,54218682,54218413,54217474,54217239	Gene ID= ENSG00000204577.11 TPM= 4.67 Transcript Type= NA
chr19	54216928	54222978	54216928	54222978	-	ENST00000245620.13@LILRB3	ENST00000245620.13	protein_coding	54222943,54222747,54222278,54221828,54221083,54220528,54220155,54219129,54218763,54218645,54218361,54217319,54216928	54222978,54222782,54222562,54222130,54221379,54220830,54220205,54219245,54218838,54218682,54218413,54217477,54217239	Gene ID= ENSG00000204577.11 TPM= 3.5 Transcript Type= protein_coding
chr19	54216884	54223039	54216884	54223039	-	ENST00000346401.10@LILRB3	ENST00000346401.10	protein_coding	54222943,54222747,54222278,54221828,54221083,54220528,54219869,54219488,54219129,54218763,54218645,54218361,54217319,54216884	54223039,54222782,54222562,54222130,54221379,54220830,54219916,54219526,54219245,54218838,54218682,54218413,54217474,54217239	Gene ID= ENSG00000204577.11 TPM= 4.67 Transcript Type= protein_coding
chr19	54250496	54257264	54250496	54257264	-	ENST00000449561.2@LILRB5	ENST00000449561.2	protein_coding	54257160,54256961,54256489,54256043,54255286,54254735,54254365,54254018,54252871,54252486,54252366,54252054,54250496	54257264,54256996,54256773,54256342,54255582,54255037,54254415,54254068,54252987,54252549,54252403,54252106,54250932	Gene ID= ENSG00000105609.16 TPM= 2.34 Transcript Type= protein_coding
chr19	54274352	54281184	54274352	54281184	-	ENST00000314446.9@LILRB2	ENST00000314446.9	protein_coding	54280961,54280463,54280264,54279791,54279345,54278812,54278260,54277889,54277550,54276807,54276381,54276264,54275951,54274352	54281184,54280544,54280299,54280075,54279647,54279108,54278562,54277939,54277597,54276929,54276456,54276301,54276003,54274829	Gene ID= ENSG00000131042.14 TPM= 1.17 Transcript Type= protein_coding
chr19	54274466	54281184	54274466	54281184	-	ENST00000391749.4@LILRB2	ENST00000391749.4	protein_coding	54280961,54280463,54280264,54279791,54279345,54278812,54278260,54277889,54277550,54276807,54276381,54276264,54275951,54274466	54281184,54280544,54280299,54280075,54279647,54279108,54278562,54277939,54277600,54276929,54276456,54276301,54276003,54274829	Gene ID= ENSG00000131042.14 TPM= 2.34 Transcript Type= protein_coding
chr19	54274466	54281097	54274466	54281097	-	ENST00000493242.1@LILRB2	ENST00000493242.1	protein_coding	54280961,54280463,54280264,54279791,54279345,54278812,54278260,54277889,54276807,54276381,54276264,54275951,54274466	54281097,54280544,54280299,54280075,54279647,54279108,54278562,54277939,54277600,54276456,54276301,54276003,54274829	Gene ID= ENSG00000131042.14 TPM= 7.01 Transcript Type= retained_intron
chr19	54307070	54313139	54307070	54313139	-	ENST00000432233.7@LILRA5	ENST00000432233.7	protein_coding	54313017,54312537,54312335,54311864,54311414,54307698,54307070	54313139,54312621,54312370,54312148,54311716,54307748,54307549	Gene ID= ENSG00000187116.13 TPM= 21.02 Transcript Type= protein_coding
chr19	54353624	54365089	54353624	54365089	-	transcript8314.chr19.nic@LAIR1	transcript8314.chr19.nic	protein_coding	54365030,54364295,54360916,54360022,54356928,54356491,54356356,54356230,54355954,54353624	54365089,54364330,54361209,54360072,54356966,54356619,54356398,54356267,54356006,54355414	Gene ID= ENSG00000167613.15 TPM= 8.76 Transcript Type= NA
chr19	54353624	54365039	54353624	54365039	-	transcript8317.chr19.nic@LAIR1	transcript8317.chr19.nic	protein_coding	54364771,54364295,54361010,54360022,54356928,54356491,54356356,54356230,54355954,54353624	54365039,54364486,54361209,54360072,54356966,54356619,54356398,54356267,54356006,54355414	Gene ID= ENSG00000167613.15 TPM= 5.25 Transcript Type= NA
chr19	54358006	54365030	54358006	54365030	-	transcript8343.chr19.nic@LAIR1	transcript8343.chr19.nic	protein_coding	54364771,54364295,54360916,54360022,54358006	54365030,54364330,54361209,54360072,54358625	Gene ID= ENSG00000167613.15 TPM= 4.67 Transcript Type= NA
chr19	54354675	54364995	54354675	54364995	-	ENST00000434277.6@LAIR1	ENST00000434277.6	protein_coding	54364771,54364295,54360916,54360022,54356928,54356491,54356356,54356230,54355954,54354675	54364995,54364330,54361206,54360072,54356966,54356619,54356398,54356267,54356006,54355414	Gene ID= ENSG00000167613.15 TPM= 26.85 Transcript Type= protein_coding
chr19	54444778	54446051	54444778	54446051	+	transcript8353.chr19.nnic@NA	transcript8353.chr19.nnic	NA	54444778	54446051	Gene ID= novel_gene_chr19_8354 TPM= 3.5 Transcript Type= NA
chr19	54448887	54462037	54448887	54462037	+	ENST00000326764.9@LENG8	ENST00000326764.9	protein_coding	54448887,54451290,54452093,54452651,54453546,54454430,54454951,54455364,54455967,54456325,54456636,54457747,54457934,54458103,54458314,54460766	54449310,54451382,54452267,54452752,54453656,54454682,54455092,54455567,54456245,54456465,54456921,54457848,54458002,54458232,54458521,54462037	Gene ID= ENSG00000167615.16 TPM= 88.15 Transcript Type= protein_coding
chr19	54449134	54462015	54449134	54462015	+	transcript8304.chr19.nic@LENG8	transcript8304.chr19.nic	protein_coding	54449134,54451290,54452093,54452651,54453546,54454430,54454951,54455364,54455967,54456325,54456636,54457747,54457934,54458103,54458314	54449306,54451382,54452267,54452752,54453656,54454682,54455092,54455567,54456245,54456465,54456921,54457848,54458002,54458232,54462015	Gene ID= ENSG00000167615.16 TPM= 81.15 Transcript Type= NA
chr19	54450619	54454517	54450619	54454517	+	transcript8352.chr19.nic@LENG8	transcript8352.chr19.nic	protein_coding	54450619,54452651	54452267,54454517	Gene ID= ENSG00000167615.16 TPM= 5.84 Transcript Type= NA
chr19	54465026	54473264	54465026	54473264	-	ENST00000301200.2@CDC42EP5	ENST00000301200.2	protein_coding	54473064,54471545,54465026	54473264,54471685,54465547	Gene ID= ENSG00000167617.2 TPM= 33.86 Transcript Type= protein_coding
chr19	54572957	54587556	54572957	54587556	+	transcript8368.chr19.nic@LILRA2	transcript8368.chr19.nic	protein_coding	54572957,54574301,54574731,54575256,54575807,54587201	54574111,54574582,54575033,54575552,54576109,54587556	Gene ID= ENSG00000239998.5 TPM= 9.34 Transcript Type= NA
chr19	54573790	54587556	54573790	54587556	+	transcript8369.chr19.nnic@LILRA2	transcript8369.chr19.nnic	protein_coding	54573790,54574076,54574301,54574731,54575807,54587201	54573912,54574111,54574582,54575033,54576109,54587556	Gene ID= ENSG00000239998.5 TPM= 3.5 Transcript Type= NA
chr19	54593632	54602090	54593632	54602090	+	transcript8356.chr19.nic@LILRA1	transcript8356.chr19.nic	protein_coding	54593632,54594441,54594665,54595100,54595639,54596189,54599236,54600512,54600699	54593781,54594476,54594952,54595402,54595935,54596491,54599286,54600550,54602090	Gene ID= ENSG00000104974.11 TPM= 2.34 Transcript Type= NA
chr19	54593582	54601877	54593582	54601877	+	ENST00000473156.5@LILRA1	ENST00000473156.5	protein_coding	54593582,54594441,54594665,54595100,54595755,54596189,54599236,54600512,54600699	54593781,54594476,54594952,54595402,54595935,54596491,54599286,54600550,54601877	Gene ID= ENSG00000104974.11 TPM= 1.17 Transcript Type= processed_transcript
chr19	54617148	54638022	54617148	54638022	+	transcript8373.chr19.nic@LILRB1	transcript8373.chr19.nic	protein_coding	54617148,54630517,54631026,54631271,54631500,54631935,54632464,54633016,54633638,54633971,54634641,54635104,54635259,54635557,54636494,54636732	54617349,54630633,54631107,54631306,54631787,54632237,54632760,54633318,54633688,54634021,54634763,54635179,54635296,54635609,54636652,54638022	Gene ID= ENSG00000104972.15 TPM= 2.34 Transcript Type= NA
chr19	54630410	54637528	54630410	54637528	+	ENST00000396327.7@LILRB1	ENST00000396327.7	protein_coding	54630410,54631026,54631271,54631500,54631935,54632464,54633016,54633638,54633971,54634641,54635104,54635259,54635557,54636497,54636732	54630633,54631107,54631306,54631787,54632237,54632760,54633318,54633688,54634021,54634763,54635179,54635296,54635609,54636652,54637528	Gene ID= ENSG00000104972.15 TPM= 2.34 Transcript Type= protein_coding
chr19	54617158	54637528	54617158	54637528	+	ENST00000396331.5@LILRB1	ENST00000396331.5	protein_coding	54617158,54630517,54631026,54631271,54631500,54631935,54632464,54633016,54633638,54633974,54634641,54635104,54635259,54635557,54636497,54636732	54617349,54630633,54631107,54631306,54631787,54632237,54632760,54633318,54633688,54634021,54634763,54635179,54635296,54635609,54636652,54637528	Gene ID= ENSG00000104972.15 TPM= 5.84 Transcript Type= protein_coding
chr19	54662128	54670359	54662128	54670359	+	ENST00000391736.5@LILRB4	ENST00000391736.5	protein_coding	54662128,54662509,54662819,54663532,54663754,54664186,54664799,54665130,54665815,54666240,54666399,54666697,54667635,54667873	54662188,54662547,54663067,54663567,54664038,54664485,54664849,54665180,54665931,54666315,54666436,54666749,54667793,54670359	Gene ID= ENSG00000186818.12 TPM= 10.51 Transcript Type= protein_coding
chr19	54662995	54668397	54662995	54668397	+	ENST00000430952.6@LILRB4	ENST00000430952.6	protein_coding	54662995,54663532,54663754,54664186,54664799,54665130,54665815,54666240,54666399,54666697,54667638,54667873	54663067,54663567,54664038,54664485,54664849,54665180,54665931,54666315,54666436,54666749,54667793,54668397	Gene ID= ENSG00000186818.12 TPM= 4.67 Transcript Type= protein_coding
chr19	54832676	54848569	54832676	54848569	+	ENST00000339924.12@KIR2DS4	ENST00000339924.12	polymorphic_pseudogene	54832676,54835079,54837576,54839428,54842868,54847184,54847751,54847902	54832798,54835114,54837875,54839699,54842918,54847288,54847803,54848569	Gene ID= ENSG00000221957.8 TPM= 1.17 Transcript Type= polymorphic_pseudogene
chr19	54850443	54867207	54850443	54867207	+	ENST00000326321.7@KIR3DL2	ENST00000326321.7	protein_coding	54850443,54851220,54851998,54853747,54855619,54859079,54865805,54866370,54866522	54850509,54851255,54852282,54854046,54855912,54859129,54865909,54866422,54867207	Gene ID= ENSG00000240403.5 TPM= 3.5 Transcript Type= protein_coding
chr19	54965252	55001142	54965252	55001142	+	ENST00000543010.5@NLRP2	ENST00000543010.5	protein_coding	54965252,54969999,54974500,54977752,54981617,54982162,54985047,54986151,54990022,54990502,54994269,54997317,55000760	54965377,54970295,54974544,54977823,54981682,54983728,54985217,54986315,54990192,54990672,54994439,54997487,55001142	Gene ID= ENSG00000022556.15 TPM= 4.09 Transcript Type= protein_coding
chr19	54966343	55001140	54966343	55001140	+	ENST00000448584.6@NLRP2	ENST00000448584.6	protein_coding	54966343,54969999,54974500,54977752,54981617,54982162,54985047,54986151,54990022,54990502,54994269,54997317,55000760	54966467,54970295,54974544,54977823,54981682,54983728,54985217,54986315,54990192,54990672,54994439,54997487,55001140	Gene ID= ENSG00000022556.15 TPM= 14.59 Transcript Type= protein_coding
chr19	54966371	55001135	54966371	55001135	+	transcript8409.chr19.nic@NLRP2	transcript8409.chr19.nic	protein_coding	54966371,54969999,54974500,54977752,54981617,54982162,54985047,54986151,54990022,54990502,54994269,54997317,55000760	54966467,54970295,54974544,54977823,54981682,54983728,54985217,54986315,54990393,54990672,54994439,54997487,55001135	Gene ID= ENSG00000022556.15 TPM= 2.34 Transcript Type= NA
chr19	55044343	55069529	55044343	55069529	-	ENST00000396247.7@RDH13	ENST00000396247.7	protein_coding	55069322,55064296,55059157,55056653,55048659,55048329,55047387,55044343	55069529,55064412,55059275,55056808,55048763,55048541,55047488,55045309	Gene ID= ENSG00000160439.15 TPM= 1.17 Transcript Type= protein_coding
chr19	55075856	55087920	55075856	55087920	+	transcript8441.chr19.nic@EPS8L1	transcript8441.chr19.nic	protein_coding	55075856,55076408,55078088,55078999,55079690,55080129,55080772,55081231,55081773,55082092,55082275,55082454,55083378,55085841,55086061,55086392,55086714,55087303,55087528	55075919,55076461,55078128,55079057,55079851,55080278,55080854,55081492,55081899,55082180,55082349,55082602,55083644,55085973,55086192,55086518,55086888,55087435,55087920	Gene ID= ENSG00000131037.14 TPM= 7.2 Transcript Type= NA
chr19	55075901	55087922	55075901	55087922	+	ENST00000201647.10@EPS8L1	ENST00000201647.10	protein_coding	55075901,55076408,55078088,55078999,55079690,55080129,55080772,55081231,55081773,55082092,55082275,55082454,55083378,55083616,55085841,55086061,55086392,55086714,55087303,55087528	55075919,55076461,55078128,55079057,55079851,55080278,55080854,55081492,55081899,55082180,55082349,55082602,55083519,55083644,55085973,55086192,55086518,55086888,55087435,55087922	Gene ID= ENSG00000131037.14 TPM= 18.88 Transcript Type= protein_coding
chr19	55080392	55087919	55080392	55087919	+	ENST00000245618.5@EPS8L1	ENST00000245618.5	protein_coding	55080392,55080772,55081231,55081773,55082092,55082275,55082454,55083378,55083616,55085841,55086061,55086392,55086714,55087303,55087528	55080541,55080854,55081492,55081899,55082180,55082349,55082602,55083519,55083644,55085973,55086192,55086518,55086888,55087435,55087919	Gene ID= ENSG00000131037.14 TPM= 4.29 Transcript Type= protein_coding
chr19	55090913	55117682	55090913	55117682	-	transcript8427.chr19.nic@PPP1R12C	transcript8427.chr19.nic	protein_coding	55117223,55112665,55112467,55103409,55098951,55098784,55096262,55096051,55095867,55095445,55095291,55094661,55094345,55093153,55093016,55092783,55092622,55092442,55092222,55091859,55091650,55090913	55117682,55112795,55112585,55103568,55099095,55098858,55096335,55096178,55095940,55095603,55095358,55094798,55094435,55093233,55093076,55092865,55092662,55092544,55092326,55091909,55091700,55091558	Gene ID= ENSG00000125503.12 TPM= 21.8 Transcript Type= NA
chr19	55090913	55117559	55090913	55117559	-	ENST00000263433.7@PPP1R12C	ENST00000263433.7	protein_coding	55117223,55112665,55112467,55103409,55098951,55098784,55096262,55096051,55095867,55095445,55095291,55094661,55094345,55093153,55093016,55092783,55092622,55092442,55092222,55091859,55091650,55090913	55117559,55112795,55112585,55103568,55099095,55098858,55096335,55096178,55095940,55095603,55095358,55094798,55094435,55093233,55093076,55092868,55092662,55092544,55092326,55091909,55091700,55091558	Gene ID= ENSG00000125503.12 TPM= 134.47 Transcript Type= protein_coding
chr19	55229780	55259052	55229780	55259052	-	transcript8459.chr19.nnic@PPP6R1	transcript8459.chr19.nnic	protein_coding	55258435,55246899,55245492,55245265,55245120,55242376,55242166,55241477,55241239,55240945,55240236,55239999,55239826,55239594,55239405,55236913,55236643,55232075,55231802,55231598,55231410,55230774,55230613,55229780	55259052,55247109,55245678,55245402,55245185,55242488,55242279,55241639,55241391,55241079,55240300,55240114,55239911,55239683,55239502,55236970,55236821,55232211,55231982,55231668,55231491,55230884,55230684,55230531	Gene ID= ENSG00000105063.18 TPM= 10.16 Transcript Type= NA
chr19	55229780	55259052	55229780	55259052	-	transcript8462.chr19.nic@PPP6R1	transcript8462.chr19.nic	protein_coding	55258435,55246877,55245492,55245265,55245120,55242376,55242166,55241239,55240945,55240236,55239999,55239826,55239594,55239405,55236913,55236643,55232075,55231802,55231598,55231410,55230774,55230613,55229780	55259052,55247109,55245678,55245402,55245185,55242488,55242279,55241639,55241079,55240300,55240114,55239911,55239683,55239502,55236970,55236821,55232211,55231982,55231668,55231491,55230884,55230684,55230531	Gene ID= ENSG00000105063.18 TPM= 12.49 Transcript Type= NA
chr19	55229780	55258995	55229780	55258995	-	ENST00000412770.6@PPP6R1	ENST00000412770.6	protein_coding	55258435,55246877,55245492,55245265,55245120,55242376,55242166,55241477,55241239,55240945,55240236,55239999,55239826,55239594,55239405,55236913,55236643,55232075,55231802,55231598,55231410,55230774,55230613,55229780	55258995,55247109,55245678,55245402,55245185,55242488,55242279,55241639,55241391,55241079,55240300,55240114,55239911,55239683,55239502,55236970,55236821,55232211,55231982,55231668,55231491,55230884,55230684,55230531	Gene ID= ENSG00000105063.18 TPM= 194.64 Transcript Type= protein_coding
chr19	55262231	55280360	55262231	55280360	-	ENST00000255631.9@HSPBP1	ENST00000255631.9	protein_coding	55280218,55280035,55279399,55277642,55274398,55266131,55265886,55265278,55262231	55280360,55280108,55279702,55277846,55274622,55266286,55265982,55265389,55262682	Gene ID= ENSG00000133265.10 TPM= 21.6 Transcript Type= protein_coding
chr19	55262353	55280126	55262353	55280126	-	transcript8480.chr19.nnic@HSPBP1	transcript8480.chr19.nnic	protein_coding	55280035,55279399,55277642,55274398,55266131,55265886,55265278,55262353	55280126,55279702,55277846,55274622,55266286,55265982,55265367,55262682	Gene ID= ENSG00000133265.10 TPM= 2.34 Transcript Type= NA
chr19	55262353	55280177	55262353	55280177	-	ENST00000433386.6@HSPBP1	ENST00000433386.6	protein_coding	55280035,55279399,55277642,55274398,55266131,55265886,55265278,55262353	55280177,55279702,55277846,55274622,55266286,55265982,55265389,55262682	Gene ID= ENSG00000133265.10 TPM= 44.95 Transcript Type= protein_coding
chr19	55339853	55348120	55339853	55348120	+	ENST00000255613.7@KMT5C	ENST00000255613.7	protein_coding	55339853,55341794,55342215,55342742,55343680,55343978,55346213,55346500,55346956	55339957,55342046,55342380,55342851,55343843,55343997,55346349,55346687,55348120	Gene ID= ENSG00000133247.13 TPM= 3.5 Transcript Type= protein_coding
chr19	55379245	55384598	55379245	55384598	-	ENST00000444469.3@TMEM238	ENST00000444469.3	protein_coding	55383722,55379245	55384598,55379367	Gene ID= ENSG00000233493.3 TPM= 80.56 Transcript Type= protein_coding
chr19	55385345	55392085	55385345	55392085	+	ENST00000344063.6@RPL28	ENST00000344063.6	protein_coding	55385345,55386350,55386570,55387930,55388243	55385965,55386438,55386693,55388048,55392085	Gene ID= ENSG00000108107.14 TPM= 24.52 Transcript Type= protein_coding
chr19	55385961	55388373	55385961	55388373	+	ENST00000559463.5@RPL28	ENST00000559463.5	protein_coding	55385961,55386570,55387930,55388243	55386438,55386693,55388048,55388373	Gene ID= ENSG00000108107.14 TPM= 220.68 Transcript Type= protein_coding
chr19	55386350	55388373	55386350	55388373	+	ENST00000558131.1@RPL28	ENST00000558131.1	protein_coding	55386350,55386570,55387930,55388243	55386438,55386674,55388048,55388373	Gene ID= ENSG00000108107.14 TPM= 2.34 Transcript Type= protein_coding
chr19	55452989	55461569	55452989	55461569	-	ENST00000425675.6@ISOC2	ENST00000425675.6	protein_coding	55461512,55456349,55455636,55455260,55454989,55452989	55461569,55456489,55455845,55455330,55455106,55453388	Gene ID= ENSG00000063241.7 TPM= 2.34 Transcript Type= protein_coding
chr19	55485004	55487568	55485004	55487568	+	ENST00000205194.4@NAT14	ENST00000205194.4	protein_coding	55485004,55485661,55486408	55485258,55485780,55487568	Gene ID= ENSG00000090971.4 TPM= 7.01 Transcript Type= protein_coding
chr19	55539139	55547357	55539139	55547357	-	transcript8522.chr19.nnic@SBK3	transcript8522.chr19.nnic	protein_coding	55547263,55544799,55544100,55539139	55547357,55544949,55544302,55541526	Gene ID= ENSG00000231274.5 TPM= 4.67 Transcript Type= NA
chr19	55591371	55599527	55591371	55599527	-	ENST00000221665.4@FIZ1	ENST00000221665.4	protein_coding	55599474,55597572,55591371	55599527,55597901,55593646	Gene ID= ENSG00000179943.7 TPM= 26.85 Transcript Type= protein_coding
chr19	55601879	55603138	55601879	55603138	+	ENST00000591046.1@ZNF524	ENST00000591046.1	protein_coding	55601879	55603138	Gene ID= ENSG00000171443.6 TPM= 7.59 Transcript Type= protein_coding
chr19	55600369	55603136	55600369	55603136	+	ENST00000301073.3@ZNF524	ENST00000301073.3	protein_coding	55600369,55602075	55600408,55603136	Gene ID= ENSG00000171443.6 TPM= 42.62 Transcript Type= protein_coding
chr19	55600254	55603136	55600254	55603136	+	transcript8532.chr19.nnic@NA	transcript8532.chr19.nnic	NA	55600254	55603136	Gene ID= novel_gene_chr19_8533 TPM= 5.84 Transcript Type= NA
chr19	55608314	55610079	55608314	55610079	-	transcript8571.chr19.nnic@NA	transcript8571.chr19.nnic	NA	55608314	55610079	Gene ID= novel_gene_chr19_8572 TPM= 5.84 Transcript Type= NA
chr19	55620742	55624601	55620742	55624601	-	ENST00000325351.4@ZNF784	ENST00000325351.4	protein_coding	55624484,55620742	55624601,55622644	Gene ID= ENSG00000179922.5 TPM= 22.18 Transcript Type= protein_coding
chr19	55640896	55643469	55640896	55643469	+	ENST00000325333.9@ZNF580	ENST00000325333.9	protein_coding	55640896,55642497	55641183,55643469	Gene ID= ENSG00000213015.8 TPM= 55.46 Transcript Type= protein_coding
chr19	55641763	55643469	55641763	55643469	+	ENST00000543039.2@ZNF580	ENST00000543039.2	protein_coding	55641763	55643469	Gene ID= ENSG00000213015.8 TPM= 20.43 Transcript Type= protein_coding
chr19	55643547	55645622	55643547	55645622	+	ENST00000270451.5@ZNF581	ENST00000270451.5	protein_coding	55643547,55644553	55643774,55645622	Gene ID= ENSG00000171425.9 TPM= 23.35 Transcript Type= protein_coding
chr19	55636119	55639033	55636119	55639033	+	transcript8569.chr19.nnic@NA	transcript8569.chr19.nnic	NA	55636119	55639033	Gene ID= novel_gene_chr19_8570 TPM= 5.84 Transcript Type= NA
chr19	55648233	55653161	55648233	55653161	+	ENST00000588740.5@CCDC106	ENST00000588740.5	protein_coding	55648233,55648946,55649205,55649408,55651283,55652430	55648277,55649077,55649309,55649584,55651495,55653161	Gene ID= ENSG00000173581.7 TPM= 3.89 Transcript Type= protein_coding
chr19	55648143	55653161	55648143	55653161	+	ENST00000586790.5@CCDC106	ENST00000586790.5	protein_coding	55648143,55649205,55649408,55651283,55652430	55649077,55649309,55649584,55651495,55653161	Gene ID= ENSG00000173581.7 TPM= 9.73 Transcript Type= protein_coding
chr19	55648035	55653161	55648035	55653161	+	ENST00000308964.7@CCDC106	ENST00000308964.7	protein_coding	55648035,55649002,55649205,55649408,55651283,55652430	55648277,55649077,55649309,55649584,55651495,55653161	Gene ID= ENSG00000173581.7 TPM= 8.56 Transcript Type= protein_coding
chr19	55655036	55674716	55655036	55674716	+	transcript8535.chr19.nnic@U2AF2	transcript8535.chr19.nnic	protein_coding	55655036,55659210,55660177,55660516,55661038,55662502,55663606,55668507,55668670,55669083,55669444,55673934,55674511	55655153,55659345,55660221,55660619,55661189,55662618,55663744,55668586,55668792,55669169,55669692,55673954,55674716	Gene ID= ENSG00000063244.12 TPM= 2.34 Transcript Type= NA
chr19	55654146	55674715	55654146	55674715	+	ENST00000450554.6@U2AF2	ENST00000450554.6	protein_coding	55654146,55659210,55660177,55660516,55661038,55662502,55663606,55668507,55668670,55669083,55669444,55673934	55655153,55659345,55660221,55660619,55661189,55662618,55663744,55668586,55668792,55669169,55669692,55674715	Gene ID= ENSG00000063244.12 TPM= 25.69 Transcript Type= protein_coding
chr19	55675189	55695766	55675189	55695766	+	transcript8544.chr19.nnic@EPN1	transcript8544.chr19.nnic	protein_coding	55675189,55677046,55678527,55685396,55688870,55689297,55689867,55691754,55692686,55692951,55694726,55695148	55675435,55677218,55678855,55685645,55688994,55689371,55689950,55692057,55692796,55693037,55694983,55695766	Gene ID= ENSG00000063245.14 TPM= 16.78 Transcript Type= NA
chr19	55675204	55695766	55675204	55695766	+	transcript8550.chr19.nic@EPN1	transcript8550.chr19.nic	protein_coding	55675204,55678527,55685396,55688870,55689297,55689867,55691754,55692686,55692954,55694726,55695148	55675435,55678855,55685645,55688994,55689371,55689950,55692057,55692796,55693037,55694983,55695766	Gene ID= ENSG00000063245.14 TPM= 37.04 Transcript Type= NA
chr19	55675226	55709533	55675226	55709533	+	ENST00000270460.10@EPN1	ENST00000270460.10	protein_coding	55675226,55678527,55685396,55688870,55689297,55689867,55691754,55692686,55692951,55694726,55695148	55675435,55678855,55685645,55688994,55689371,55689950,55692057,55692796,55693037,55694983,55709533	Gene ID= ENSG00000063245.14 TPM= 7.09 Transcript Type= protein_coding
chr19	55675245	55695766	55675245	55695766	+	ENST00000085079.11@EPN1	ENST00000085079.11	protein_coding	55675245,55678527,55685396,55688870,55689867,55691754,55692686,55692954,55694726,55695148	55675435,55678855,55685645,55688994,55689950,55692057,55692796,55693037,55694983,55695766	Gene ID= ENSG00000063245.14 TPM= 7.06 Transcript Type= protein_coding
chr19	56087366	56121280	56087366	56121280	-	ENST00000610935.1@ZNF787	ENST00000610935.1	protein_coding	56121172,56103139,56087366	56121280,56103227,56089092	Gene ID= ENSG00000142409.5 TPM= 47.87 Transcript Type= protein_coding
chr19	56096501	56099725	56096501	56099725	+	transcript8575.chr19.nnic@NA	transcript8575.chr19.nnic	NA	56096501,56098709	56098632,56099725	Gene ID= novel_gene_chr19_8576 TPM= 2.34 Transcript Type= NA
chr19	56141177	56160892	56141177	56160892	+	transcript8577.chr19.nic@ZNF444	transcript8577.chr19.nic	protein_coding	56141177,56142276,56146247,56146890,56158494,56159624	56141357,56142386,56146420,56147208,56158602,56160892	Gene ID= ENSG00000167685.14 TPM= 7.59 Transcript Type= NA
chr19	56140954	56160892	56140954	56160892	+	transcript8580.chr19.nic@ZNF444	transcript8580.chr19.nic	protein_coding	56140954,56146247,56146890,56158494,56159624	56141179,56146420,56147208,56158602,56160892	Gene ID= ENSG00000167685.14 TPM= 9.92 Transcript Type= NA
chr19	56141321	56160893	56141321	56160893	+	ENST00000592949.5@ZNF444	ENST00000592949.5	protein_coding	56141321,56146247,56146890,56158494,56159627	56141357,56146420,56147208,56158602,56160893	Gene ID= ENSG00000167685.14 TPM= 8.17 Transcript Type= protein_coding
chr19	56154301	56160886	56154301	56160886	+	ENST00000587236.1@ZNF444	ENST00000587236.1	protein_coding	56154301,56159624	56158602,56160886	Gene ID= ENSG00000167685.14 TPM= 5.84 Transcript Type= retained_intron
chr19	56152485	56155330	56152485	56155330	-	transcript8585.chr19.nnic@NA	transcript8585.chr19.nnic	NA	56152485	56155330	Gene ID= novel_gene_chr19_8586 TPM= 5.84 Transcript Type= NA
chr19	56368319	56378350	56368319	56378350	+	ENST00000488113.5@ZNF542P	ENST00000488113.5	transcribed_unprocessed_pseudogene	56368319,56368866,56373157,56373531,56374686,56376867	56368460,56368936,56373283,56373623,56374757,56378350	Gene ID= ENSG00000240225.10 TPM= 1.17 Transcript Type= processed_transcript
chr19	56368321	56379828	56368321	56379828	+	ENST00000495307.5@ZNF542P	ENST00000495307.5	transcribed_unprocessed_pseudogene	56368321,56368866,56373157,56373531,56376867	56368460,56368936,56373283,56373623,56379828	Gene ID= ENSG00000240225.10 TPM= 3.5 Transcript Type= processed_transcript
chr19	56375846	56393596	56375846	56393596	-	transcript8601.chr19.nic@ZNF582	transcript8601.chr19.nic	protein_coding	56393220,56391744,56390375,56390001,56375846	56393596,56391832,56390501,56390096,56376121	Gene ID= ENSG00000018869.16 TPM= 2.34 Transcript Type= NA
chr19	56404332	56427364	56404332	56427364	+	ENST00000333201.13@ZNF583	ENST00000333201.13	protein_coding	56404332,56407026,56413959,56414345,56422891	56404452,56407123,56414085,56414440,56427364	Gene ID= ENSG00000198440.9 TPM= 1.17 Transcript Type= protein_coding
chr19	56439325	56477374	56439325	56477374	-	ENST00000292069.10@ZNF667	ENST00000292069.10	protein_coding	56477272,56462338,56460689,56458155,56439325	56477374,56462429,56460815,56458247,56442741	Gene ID= ENSG00000198046.11 TPM= 3.5 Transcript Type= protein_coding
chr19	56478131	56495432	56478131	56495432	+	ENST00000585445.1@ZNF667-AS1	ENST00000585445.1	lincRNA	56478131,56494163	56478381,56495432	Gene ID= ENSG00000166770.10 TPM= 19.85 Transcript Type= lincRNA
chr19	56478183	56495441	56478183	56495441	+	ENST00000592146.2@ZNF667-AS1	ENST00000592146.2	lincRNA	56478183,56494163,56495048	56478276,56494342,56495441	Gene ID= ENSG00000166770.10 TPM= 1.17 Transcript Type= lincRNA
chr19	56507843	56530221	56507843	56530221	+	ENST00000308031.9@ZNF471	ENST00000308031.9	protein_coding	56507843,56511517,56516275,56518482,56524324	56507920,56511604,56516401,56518577,56530221	Gene ID= ENSG00000196263.7 TPM= 2.34 Transcript Type= protein_coding
chr19	56630743	56630924	56630743	56630924	+	transcript8634.chr19.nnic@NA	transcript8634.chr19.nnic	NA	56630743	56630924	Gene ID= novel_gene_chr19_8635 TPM= 2.34 Transcript Type= NA
chr19	56661981	56671760	56661981	56671760	-	ENST00000537055.3@ZNF835	ENST00000537055.3	protein_coding	56671576,56661981	56671760,56665245	Gene ID= ENSG00000127903.13 TPM= 1.17 Transcript Type= protein_coding
chr19	57191501	57194969	57191501	57194969	+	ENST00000600531.5@ZNF264	ENST00000600531.5	protein_coding	57191501,57193875,57194769	57191946,57194001,57194969	Gene ID= ENSG00000083844.10 TPM= 1.17 Transcript Type= protein_coding
chr19	57298469	57304062	57298469	57304062	-	transcript8654.chr19.nnic@NA	transcript8654.chr19.nnic	NA	57298469	57304062	Gene ID= novel_gene_chr19_8655 TPM= 16.35 Transcript Type= NA
chr19	57304305	57308562	57304305	57308562	+	ENST00000593427.1@AC005261.2	ENST00000593427.1	lincRNA	57304305	57308562	Gene ID= ENSG00000268205.1 TPM= 3.5 Transcript Type= lincRNA
chr19	57320509	57330776	57320509	57330776	+	ENST00000321545.4@ZNF543	ENST00000321545.4	protein_coding	57320509,57323682,57326633,57327704	57320871,57323808,57326728,57330776	Gene ID= ENSG00000178229.7 TPM= 8.17 Transcript Type= protein_coding
chr19	57363511	57365353	57363511	57365353	+	ENST00000543226.1@AC003002.1	ENST00000543226.1	protein_coding	57363511,57364815	57363703,57365353	Gene ID= ENSG00000256060.2 TPM= 9.34 Transcript Type= protein_coding
chr19	57411164	57421939	57411164	57421939	+	ENST00000307658.11@ZNF17	ENST00000307658.11	protein_coding	57411164,57413596,57417912,57419635	57411406,57413636,57418038,57421939	Gene ID= ENSG00000186272.12 TPM= 7.01 Transcript Type= protein_coding
chr19	57487711	57494672	57487711	57494672	+	ENST00000426954.6@ZNF419	ENST00000426954.6	protein_coding	57487711,57491468,57492113,57492856	57487983,57491597,57492211,57494672	Gene ID= ENSG00000105136.20 TPM= 2.34 Transcript Type= protein_coding
chr19	57487722	57494648	57487722	57494648	+	ENST00000424930.6@ZNF419	ENST00000424930.6	protein_coding	57487722,57490147,57491468,57492113,57492856	57487983,57490185,57491597,57492211,57494648	Gene ID= ENSG00000105136.20 TPM= 2.34 Transcript Type= protein_coding
chr19	57499941	57508161	57499941	57508161	+	ENST00000282292.8@ZNF773	ENST00000282292.8	protein_coding	57499941,57504657,57505302,57506358	57500113,57504786,57505400,57508161	Gene ID= ENSG00000152439.12 TPM= 1.17 Transcript Type= protein_coding
chr19	57527393	57540876	57527393	57540876	+	ENST00000376233.7@ZNF549	ENST00000376233.7	protein_coding	57527393,57531070,57535144,57537204	57527606,57531108,57535270,57540876	Gene ID= ENSG00000121406.8 TPM= 12.84 Transcript Type= protein_coding
chr19	57541836	57559863	57541836	57559863	-	ENST00000457177.5@ZNF550	ENST00000457177.5	protein_coding	57559656,57556231,57552627,57546457,57541836	57559863,57556357,57552722,57547993,57543243	Gene ID= ENSG00000251369.8 TPM= 16.35 Transcript Type= protein_coding
chr19	57571566	57578927	57571566	57578927	-	ENST00000196489.3@ZNF416	ENST00000196489.3	protein_coding	57578672,57578057,57575804,57571566	57578927,57578098,57575930,57573701	Gene ID= ENSG00000083817.8 TPM= 12.84 Transcript Type= protein_coding
chr19	57599885	57612722	57599885	57612722	+	ENST00000600619.1@ZNF530	ENST00000600619.1	protein_coding	57599885,57604277,57605686,57612503	57600134,57604406,57607827,57612722	Gene ID= ENSG00000183647.10 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr19	57614251	57624723	57614251	57624723	+	ENST00000396161.9@ZNF134	ENST00000396161.9	protein_coding	57614251,57619412,57620160	57614503,57619508,57624723	Gene ID= ENSG00000213762.11 TPM= 8.17 Transcript Type= protein_coding
chr19	57633175	57644041	57633175	57644041	+	transcript8743.chr19.nic@ZNF211	transcript8743.chr19.nic	protein_coding	57633175,57633786,57634023,57634629,57640704	57633436,57633905,57634061,57634755,57644041	Gene ID= ENSG00000121417.13 TPM= 2.34 Transcript Type= NA
chr19	57633168	57642779	57633168	57642779	+	ENST00000347302.7@ZNF211	ENST00000347302.7	protein_coding	57633168,57634629,57640704	57633436,57634755,57642779	Gene ID= ENSG00000121417.13 TPM= 4.67 Transcript Type= protein_coding
chr19	57633169	57642768	57633169	57642768	+	transcript8763.chr19.nic@ZNF211	transcript8763.chr19.nic	protein_coding	57633169,57640704	57634755,57642768	Gene ID= ENSG00000121417.13 TPM= 3.5 Transcript Type= NA
chr19	57633216	57642764	57633216	57642764	+	ENST00000535785.1@ZNF211	ENST00000535785.1	protein_coding	57633216,57633713,57634023,57634629,57640704	57633436,57633905,57634061,57634755,57642764	Gene ID= ENSG00000121417.13 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr19	57681979	57690654	57681979	57690654	+	ENST00000282296.9@ZNF551	ENST00000282296.9	protein_coding	57681979,57685262,57686481	57682244,57685385,57690654	Gene ID= ENSG00000204519.10 TPM= 7.01 Transcript Type= protein_coding
chr19	57719751	57727624	57719751	57727624	-	ENST00000317398.10@ZNF671	ENST00000317398.10	protein_coding	57727391,57723214,57722316,57719751	57727624,57723340,57722438,57721697	Gene ID= ENSG00000083814.13 TPM= 17.51 Transcript Type= protein_coding
chr19	57746815	57758156	57746815	57758156	+	transcript8774.chr19.nic@ZNF776	transcript8774.chr19.nic	protein_coding	57746815,57750785,57753291,57756872	57747091,57750911,57755691,57758156	Gene ID= ENSG00000152443.12 TPM= 2.34 Transcript Type= NA
chr19	57746796	57758159	57746796	57758159	+	ENST00000317178.9@ZNF776	ENST00000317178.9	protein_coding	57746796,57750785,57753291	57747091,57750911,57758159	Gene ID= ENSG00000152443.12 TPM= 4.67 Transcript Type= protein_coding
chr19	57746815	57758145	57746815	57758145	+	transcript8779.chr19.nic@ZNF776	transcript8779.chr19.nic	protein_coding	57746815,57750785,57756872	57747091,57750911,57758145	Gene ID= ENSG00000152443.12 TPM= 4.67 Transcript Type= NA
chr19	57769670	57780577	57769670	57780577	+	ENST00000396154.6@ZNF586	ENST00000396154.6	protein_coding	57769670,57776543,57778751	57769878,57776669,57780577	Gene ID= ENSG00000083828.15 TPM= 4.67 Transcript Type= protein_coding
chr19	57787738	57790762	57787738	57790762	+	transcript8793.chr19.nnic@NA	transcript8793.chr19.nnic	NA	57787738	57790762	Gene ID= novel_gene_chr19_8794 TPM= 2.34 Transcript Type= NA
chr19	57807082	57814913	57807082	57814913	-	ENST00000391701.1@ZNF552	ENST00000391701.1	protein_coding	57814711,57813294,57807082	57814913,57813420,57809103	Gene ID= ENSG00000178935.5 TPM= 1.17 Transcript Type= protein_coding
chr19	57807909	57814913	57807909	57814913	-	ENST00000596248.1@ZNF552	ENST00000596248.1	protein_coding	57814533,57813294,57807909	57814913,57813420,57809103	Gene ID= ENSG00000178935.5 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr19	57849857	57865112	57849857	57865112	+	ENST00000339656.7@ZNF587	ENST00000339656.7	protein_coding	57849857,57856104,57858576	57850071,57856233,57865112	Gene ID= ENSG00000198466.11 TPM= 12.84 Transcript Type= protein_coding
chr19	57867580	57868609	57867580	57868609	+	transcript8795.chr19.nnic@NA	transcript8795.chr19.nnic	NA	57867580	57868609	Gene ID= novel_gene_chr19_8796 TPM= 3.5 Transcript Type= NA
chr19	57903416	57905067	57903416	57905067	+	transcript8804.chr19.nnic@NA	transcript8804.chr19.nnic	NA	57903416	57905067	Gene ID= novel_gene_chr19_8805 TPM= 5.84 Transcript Type= NA
chr19	57922263	57935255	57922263	57935255	-	transcript8803.chr19.nnic@ZNF418	transcript8803.chr19.nnic	protein_coding	57935161,57925623,57923192,57922263	57935255,57928047,57923289,57922557	Gene ID= ENSG00000196724.12 TPM= 2.34 Transcript Type= NA
chr19	57940833	57947671	57940833	57947671	-	ENST00000282308.3@ZNF256	ENST00000282308.3	protein_coding	57947442,57943934,57940833	57947671,57944060,57942647	Gene ID= ENSG00000152454.3 TPM= 5.84 Transcript Type= protein_coding
chr19	57977053	58003349	57977053	58003349	-	ENST00000341164.8@ZNF606	ENST00000341164.8	protein_coding	58002780,58001289,58000683,57999808,57988595,57988207,57977053	58003349,58001370,58000739,57999896,57988721,57988302,57980279	Gene ID= ENSG00000166704.11 TPM= 3.5 Transcript Type= protein_coding
chr19	57997396	58002819	57997396	58002819	-	ENST00000547828.5@ZNF606	ENST00000547828.5	protein_coding	58002780,58001289,58000683,57997396	58002819,58001370,58000739,57999896	Gene ID= ENSG00000166704.11 TPM= 1.17 Transcript Type= protein_coding
chr19	58002946	58007210	58002946	58007210	+	transcript8858.chr19.nnic@NA	transcript8858.chr19.nnic	NA	58002946	58007210	Gene ID= novel_gene_chr19_8859 TPM= 3.5 Transcript Type= NA
chr19	58059244	58069408	58059244	58069408	+	ENST00000313434.9@ZNF135	ENST00000313434.9	protein_coding	58059244,58059969,58061580,58063446,58066741	58059310,58060035,58061706,58063541,58069408	Gene ID= ENSG00000176293.19 TPM= 1.75 Transcript Type= protein_coding
chr19	58059267	58069408	58059267	58069408	+	transcript8842.chr19.nic@ZNF135	transcript8842.chr19.nic	protein_coding	58059267,58061580,58063446,58066741	58059310,58061706,58063541,58069408	Gene ID= ENSG00000176293.19 TPM= 4.09 Transcript Type= NA
chr19	58083859	58098234	58083859	58098234	-	transcript8829.chr19.nic@ZSCAN18	transcript8829.chr19.nic	protein_coding	58098115,58089865,58088688,58087316,58086906,58086174,58083859	58098234,58090386,58088837,58087404,58087008,58086266,58085379	Gene ID= ENSG00000121413.12 TPM= 11.09 Transcript Type= NA
chr19	58083839	58098210	58083839	58098210	-	ENST00000240727.10@ZSCAN18	ENST00000240727.10	protein_coding	58097930,58089865,58088688,58087316,58086906,58086174,58083839	58098210,58090386,58088837,58087404,58087008,58086266,58085379	Gene ID= ENSG00000121413.12 TPM= 7.59 Transcript Type= protein_coding
chr19	58183066	58213562	58183066	58213562	+	transcript8820.chr19.nic@ZNF274	transcript8820.chr19.nic	protein_coding	58183066,58183921,58186947,58206720,58209961,58211560,58212161	58183442,58183998,58187042,58207202,58210073,58211686,58213562	Gene ID= ENSG00000171606.17 TPM= 7.3 Transcript Type= NA
chr19	58183075	58213562	58183075	58213562	+	transcript8821.chr19.nnic@ZNF274	transcript8821.chr19.nnic	protein_coding	58183075,58185712,58186947,58206720,58209961,58211560,58212161	58183442,58185838,58187042,58207202,58210073,58211686,58213562	Gene ID= ENSG00000171606.17 TPM= 2.63 Transcript Type= NA
chr19	58183410	58213562	58183410	58213562	+	transcript8822.chr19.nic@ZNF274	transcript8822.chr19.nic	protein_coding	58183410,58185712,58186947,58206720,58209961,58211560,58212161	58183998,58185838,58187042,58207202,58210073,58211686,58213562	Gene ID= ENSG00000171606.17 TPM= 17.81 Transcript Type= NA
chr19	58183029	58213562	58183029	58213562	+	ENST00000424679.6@ZNF274	ENST00000424679.6	protein_coding	58183029,58206720,58209961,58211560,58212161	58183442,58207202,58210073,58211686,58213562	Gene ID= ENSG00000171606.17 TPM= 1.46 Transcript Type= protein_coding
chr19	58194898	58197358	58194898	58197358	-	transcript8860.chr19.nnic@NA	transcript8860.chr19.nnic	NA	58194898	58197358	Gene ID= novel_gene_chr19_8861 TPM= 2.34 Transcript Type= NA
chr19	58228894	58263644	58228894	58263644	+	transcript8864.chr19.nic@ZNF544	transcript8864.chr19.nic	protein_coding	58228894,58229468,58230394,58243965,58246301,58246711,58260851	58228946,58229570,58230462,58244056,58246427,58246794,58263644	Gene ID= ENSG00000198131.13 TPM= 7.01 Transcript Type= NA
chr19	58228594	58263644	58228594	58263644	+	ENST00000599227.5@ZNF544	ENST00000599227.5	protein_coding	58228594,58229468,58230394,58243965,58246301,58246746,58260851	58228946,58229570,58230462,58244056,58246427,58246794,58263644	Gene ID= ENSG00000198131.13 TPM= 8.17 Transcript Type= protein_coding
chr19	58229471	58231820	58229471	58231820	+	ENST00000599714.1@ZNF544	ENST00000599714.1	protein_coding	58229471,58230394,58231772	58229570,58230462,58231820	Gene ID= ENSG00000198131.13 TPM= 1.17 Transcript Type= processed_transcript
chr19	58245300	58248153	58245300	58248153	-	transcript8880.chr19.nnic@NA	transcript8880.chr19.nnic	NA	58245300	58248153	Gene ID= novel_gene_chr19_8881 TPM= 4.67 Transcript Type= NA
chr19	58257277	58278830	58257277	58278830	-	transcript8873.chr19.nnic@AC020915.4	transcript8873.chr19.nnic	antisense_RNA	58278523,58258585,58257277	58278830,58259691,58258479	Gene ID= ENSG00000268516.2 TPM= 3.5 Transcript Type= NA
chr19	58299731	58303609	58299731	58303609	+	transcript8878.chr19.nnic@NA	transcript8878.chr19.nnic	NA	58299731	58303609	Gene ID= novel_gene_chr19_8879 TPM= 2.34 Transcript Type= NA
chr19	58305319	58315663	58305319	58315663	+	ENST00000413518.5@AC020915.1	ENST00000413518.5	protein_coding	58305319,58306088,58312166,58314748	58305445,58306216,58312462,58315663	Gene ID= ENSG00000142396.10 TPM= 16.35 Transcript Type= protein_coding
chr19	58314780	58326933	58314780	58326933	-	transcript8887.chr19.nic@AC010642.2	transcript8887.chr19.nic	antisense_RNA	58326823,58325275,58314780	58326933,58325361,58315036	Gene ID= ENSG00000283103.1 TPM= 5.84 Transcript Type= NA
chr19	58327019	58342332	58327019	58342332	+	ENST00000329665.4@ZSCAN22	ENST00000329665.4	protein_coding	58327019,58334752,58338254	58327114,58335205,58342332	Gene ID= ENSG00000182318.5 TPM= 3.5 Transcript Type= protein_coding
chr19	58346860	58347657	58346860	58347657	-	ENST00000598345.1@A1BG	ENST00000598345.1	protein_coding	58347353,58346860	58347657,58347029	Gene ID= ENSG00000121410.11 TPM= 4.67 Transcript Type= retained_intron
chr19	58347721	58355183	58347721	58355183	+	transcript8896.chr19.nnic@A1BG-AS1	transcript8896.chr19.nnic	antisense_RNA	58347721,58352941,58353321,58353714	58347844,58353044,58353474,58355183	Gene ID= ENSG00000268895.5 TPM= 4.67 Transcript Type= NA
chr19	58350789	58355183	58350789	58355183	+	transcript8908.chr19.nic@A1BG-AS1	transcript8908.chr19.nic	antisense_RNA	58350789,58353714	58353474,58355183	Gene ID= ENSG00000268895.5 TPM= 4.67 Transcript Type= NA
chr19	58347768	58349738	58347768	58349738	+	transcript8910.chr19.nnic@NA	transcript8910.chr19.nnic	NA	58347768	58349738	Gene ID= novel_gene_chr19_8911 TPM= 2.34 Transcript Type= NA
chr19	58355641	58358251	58355641	58358251	-	transcript8914.chr19.nnic@NA	transcript8914.chr19.nnic	NA	58355641	58358251	Gene ID= novel_gene_chr19_8915 TPM= 4.67 Transcript Type= NA
chr19	58367618	58381022	58367618	58381022	-	ENST00000427624.2@ZNF837	ENST00000427624.2	protein_coding	58380941,58369717,58367618	58381022,58369928,58369361	Gene ID= ENSG00000152475.6 TPM= 2.34 Transcript Type= protein_coding
chr19	58367623	58381060	58367623	58381060	-	ENST00000597582.1@ZNF837	ENST00000597582.1	protein_coding	58380941,58369819,58367623	58381060,58369928,58369361	Gene ID= ENSG00000152475.6 TPM= 2.34 Transcript Type= protein_coding
chr19	58386400	58394806	58386400	58394806	+	ENST00000601521.5@RPS5	ENST00000601521.5	protein_coding	58386400,58387032,58388137,58392976,58393359,58394497,58394682	58386622,58387339,58388245,58393185,58393487,58394595,58394806	Gene ID= ENSG00000083845.8 TPM= 428.89 Transcript Type= protein_coding
chr19	58387269	58394803	58387269	58394803	+	ENST00000196551.7@RPS5	ENST00000196551.7	protein_coding	58387269,58388137,58392976,58393359,58394497,58394682	58387339,58388245,58393185,58393487,58394595,58394803	Gene ID= ENSG00000083845.8 TPM= 345.41 Transcript Type= protein_coding
chr19	58387264	58394804	58387264	58394804	+	ENST00000598098.5@RPS5	ENST00000598098.5	protein_coding	58387264,58388137,58393359,58394497,58394682	58387339,58388245,58393487,58394595,58394804	Gene ID= ENSG00000083845.8 TPM= 5.64 Transcript Type= protein_coding
chr19	58408625	58418327	58408625	58418327	+	ENST00000306910.8@ZNF584	ENST00000306910.8	protein_coding	58408625,58409941,58415524,58416811	58409165,58410091,58415646,58418327	Gene ID= ENSG00000171574.17 TPM= 4.67 Transcript Type= protein_coding
chr19	58408649	58418310	58408649	58418310	+	transcript8924.chr19.nic@ZNF584	transcript8924.chr19.nic	protein_coding	58408649,58415524,58416811	58409165,58415646,58418310	Gene ID= ENSG00000171574.17 TPM= 4.67 Transcript Type= NA
chr19	58408688	58418310	58408688	58418310	+	ENST00000593920.5@ZNF584	ENST00000593920.5	protein_coding	58408688,58410006,58415524,58416811	58409165,58410091,58415646,58418310	Gene ID= ENSG00000171574.17 TPM= 5.84 Transcript Type= protein_coding
chr19	58432814	58440222	58432814	58440222	-	ENST00000254166.3@ZNF132	ENST00000254166.3	protein_coding	58439759,58437047,58432814	58440222,58437215,58435211	Gene ID= ENSG00000131849.11 TPM= 7.01 Transcript Type= protein_coding
chr19	58440450	58444499	58440450	58444499	+	transcript8936.chr19.nnic@NA	transcript8936.chr19.nnic	NA	58440450	58444499	Gene ID= novel_gene_chr19_8937 TPM= 2.34 Transcript Type= NA
chr19	58451604	58457833	58451604	58457833	+	ENST00000336614.8@ZNF324B	ENST00000336614.8	protein_coding	58451604,58453696,58454228,58455183	58451704,58453822,58454344,58457833	Gene ID= ENSG00000249471.7 TPM= 5.84 Transcript Type= protein_coding
chr19	58459112	58460424	58459112	58460424	-	transcript8938.chr19.nnic@NA	transcript8938.chr19.nnic	NA	58459112	58460424	Gene ID= novel_gene_chr19_8939 TPM= 2.34 Transcript Type= NA
chr19	58467096	58473398	58467096	58473398	+	ENST00000196482.3@ZNF324	ENST00000196482.3	protein_coding	58467096,58469180,58469728,58470731	58467183,58469306,58469844,58473398	Gene ID= ENSG00000083812.11 TPM= 37.36 Transcript Type= protein_coding
chr19	58476115	58481230	58476115	58481230	+	transcript8940.chr19.nic@ZNF446	transcript8940.chr19.nic	protein_coding	58476115,58477179,58477637,58478087,58479643,58479930,58480176	58476196,58477560,58477826,58478181,58479727,58480019,58481230	Gene ID= ENSG00000083838.15 TPM= 11.48 Transcript Type= NA
chr19	58474017	58481228	58474017	58481228	+	ENST00000596341.5@ZNF446	ENST00000596341.5	protein_coding	58474017,58477179,58477637,58478087,58479643,58479930,58480329	58476196,58477560,58477826,58478181,58479727,58480019,58481228	Gene ID= ENSG00000083838.15 TPM= 3.5 Transcript Type= protein_coding
chr19	58476164	58481230	58476164	58481230	+	ENST00000594369.5@ZNF446	ENST00000594369.5	protein_coding	58476164,58477179,58477637,58478087,58479643,58479930,58480176	58476504,58477560,58477826,58478181,58479727,58480019,58481230	Gene ID= ENSG00000083838.15 TPM= 9.14 Transcript Type= protein_coding
chr19	58476115	58481230	58476115	58481230	+	transcript8944.chr19.nic@ZNF446	transcript8944.chr19.nic	protein_coding	58476115,58477179,58477637,58478087,58479643,58480176	58476196,58477560,58477826,58478181,58480019,58481230	Gene ID= ENSG00000083838.15 TPM= 6.22 Transcript Type= NA
chr19	58498333	58499275	58498333	58499275	-	ENST00000594786.1@SLC27A5	ENST00000594786.1	protein_coding	58499123,58498785,58498333	58499275,58498915,58498691	Gene ID= ENSG00000083807.9 TPM= 3.5 Transcript Type= protein_coding
chr19	58513530	58519554	58513530	58519554	-	ENST00000354590.7@ZBTB45	ENST00000354590.7	protein_coding	58519263,58516395,58513530	58519554,58517673,58514310	Gene ID= ENSG00000119574.12 TPM= 10.51 Transcript Type= protein_coding
chr19	58544455	58550715	58544455	58550715	+	transcript8972.chr19.nic@TRIM28	transcript8972.chr19.nic	protein_coding	58544455,58545425,58545764,58547376,58547597,58547792,58548034,58548294,58548486,58548740,58548988,58549331,58549737,58549949,58550147,58550377	58545097,58545537,58545896,58547511,58547713,58547906,58548180,58548408,58548592,58548910,58549240,58549650,58549860,58550035,58550284,58550715	Gene ID= ENSG00000130726.11 TPM= 12.26 Transcript Type= NA
chr19	58544469	58550716	58544469	58550716	+	ENST00000253024.9@TRIM28	ENST00000253024.9	protein_coding	58544469,58545425,58545764,58547376,58547597,58547792,58548034,58548294,58548486,58548740,58548862,58548988,58549331,58549737,58549949,58550147,58550377	58545097,58545537,58545896,58547511,58547713,58547906,58548180,58548408,58548592,58548776,58548910,58549240,58549650,58549860,58550035,58550284,58550716	Gene ID= ENSG00000130726.11 TPM= 287.81 Transcript Type= protein_coding
chr19	58544473	58550715	58544473	58550715	+	ENST00000341753.10@TRIM28	ENST00000341753.10	protein_coding	58544473,58547376,58547597,58547792,58548034,58548294,58548486,58548740,58548862,58548988,58549331,58549737,58549949,58550147,58550377	58545097,58547511,58547713,58547906,58548180,58548408,58548592,58548776,58548910,58549240,58549650,58549860,58550035,58550284,58550715	Gene ID= ENSG00000130726.11 TPM= 18.1 Transcript Type= protein_coding
chr19	58551566	58555162	58551566	58555162	-	transcript8978.chr19.nic@CHMP2A	transcript8978.chr19.nic	protein_coding	58554988,58554045,58552259,58552055,58551566	58555162,58554236,58552438,58552185,58551967	Gene ID= ENSG00000130724.8 TPM= 5.84 Transcript Type= NA
chr19	58551566	58555124	58551566	58555124	-	ENST00000312547.6@CHMP2A	ENST00000312547.6	protein_coding	58554988,58554045,58552259,58552055,58551906,58551566	58555124,58554236,58552438,58552185,58551967,58551776	Gene ID= ENSG00000130724.8 TPM= 62.47 Transcript Type= protein_coding
chr19	58551566	58554973	58551566	58554973	-	ENST00000601220.5@CHMP2A	ENST00000601220.5	protein_coding	58554865,58554045,58552259,58552055,58551906,58551566	58554973,58554236,58552438,58552185,58551967,58551776	Gene ID= ENSG00000130724.8 TPM= 9.92 Transcript Type= protein_coding
chr19	58555712	58558960	58555712	58558960	-	ENST00000253023.7@UBE2M	ENST00000253023.7	protein_coding	58558273,58557063,58556892,58556687,58556316,58555712	58558960,58557157,58556930,58556790,58556379,58556229	Gene ID= ENSG00000130725.7 TPM= 142.45 Transcript Type= protein_coding
chr19	58561933	58573059	58561933	58573059	-	transcript8985.chr19.nic@MZF1	transcript8985.chr19.nic	protein_coding	58572550,58570994,58570344,58569516,58569277,58561933	58573059,58571429,58570527,58569586,58569397,58563504	Gene ID= ENSG00000099326.8 TPM= 9.14 Transcript Type= NA
chr19	58561933	58573575	58561933	58573575	-	ENST00000215057.6@MZF1	ENST00000215057.6	protein_coding	58573055,58570994,58570344,58569516,58569277,58561933	58573575,58571429,58570527,58569586,58569397,58563504	Gene ID= ENSG00000099326.8 TPM= 11.48 Transcript Type= protein_coding
chr19	58561933	58573575	58561933	58573575	-	ENST00000599369.5@MZF1	ENST00000599369.5	protein_coding	58573373,58570994,58570344,58569516,58569277,58561933	58573575,58571429,58570527,58569586,58569397,58563504	Gene ID= ENSG00000099326.8 TPM= 9.14 Transcript Type= protein_coding
chr19	58561933	58573315	58561933	58573315	-	transcript8988.chr19.nnic@MZF1	transcript8988.chr19.nnic	protein_coding	58573055,58571162,58570344,58569516,58569277,58561933	58573315,58571429,58570527,58569586,58569397,58563504	Gene ID= ENSG00000099326.8 TPM= 5.64 Transcript Type= NA
chr19	58561933	58573544	58561933	58573544	-	transcript8996.chr19.nnic@MZF1	transcript8996.chr19.nnic	protein_coding	58573055,58570994,58569516,58569277,58561933	58573544,58571429,58569586,58569397,58563504	Gene ID= ENSG00000099326.8 TPM= 5.64 Transcript Type= NA
chr19	58561933	58573573	58561933	58573573	-	transcript9002.chr19.nic@MZF1	transcript9002.chr19.nic	protein_coding	58570344,58569516,58569277,58561933	58573573,58569586,58569397,58563504	Gene ID= ENSG00000099326.8 TPM= 20.05 Transcript Type= NA
chr19	58561931	58564613	58561931	58564613	-	ENST00000600004.1@MZF1	ENST00000600004.1	protein_coding	58561931	58564613	Gene ID= ENSG00000099326.8 TPM= 10.12 Transcript Type= retained_intron
chr19	58575460	58584397	58575460	58584397	+	ENST00000493504.1@CENPBD1P1	ENST00000493504.1	transcribed_processed_pseudogene	58575460,58581245	58575588,58584397	Gene ID= ENSG00000213753.10 TPM= 28.02 Transcript Type= processed_transcript
chr20	270863	290749	270863	290749	-	ENST00000360321.6@C20orf96	ENST00000360321.6	protein_coding	290591,290259,289559,283963,279172,278330,277226,277044,276793,275968,270863	290749,290307,289676,284081,279330,278429,277383,277145,276879,276086,271267	Gene ID= ENSG00000196476.11 TPM= 1.17 Transcript Type= protein_coding
chr20	270863	290454	270863	290454	-	transcript3.chr20.nic@C20orf96	transcript3.chr20.nic	protein_coding	290259,289559,283963,279172,278330,277226,277044,276793,275968,270863	290454,289676,284081,279330,278429,277383,277145,276879,276086,271267	Gene ID= ENSG00000196476.11 TPM= 7.01 Transcript Type= NA
chr20	270863	290454	270863	290454	-	transcript6.chr20.nic@C20orf96	transcript6.chr20.nic	protein_coding	290259,289559,283963,279172,278330,277226,277044,275968,270863	290454,289676,284081,279330,278429,277383,277145,276879,271267	Gene ID= ENSG00000196476.11 TPM= 2.34 Transcript Type= NA
chr20	270863	290454	270863	290454	-	transcript9.chr20.nic@C20orf96	transcript9.chr20.nic	protein_coding	290259,289559,283963,279172,278330,277226,275968,270863	290454,289676,284081,279330,278429,277383,277145,271267	Gene ID= ENSG00000196476.11 TPM= 2.34 Transcript Type= NA
chr20	288169	290454	288169	290454	-	transcript10.chr20.nic@C20orf96	transcript10.chr20.nic	protein_coding	290259,288169	290454,289676	Gene ID= ENSG00000196476.11 TPM= 2.34 Transcript Type= NA
chr20	270863	290429	270863	290429	-	ENST00000382369.9@C20orf96	ENST00000382369.9	protein_coding	290259,283963,279172,278330,277226,277044,276793,275968,270863	290429,284081,279330,278429,277383,277145,276879,276086,271267	Gene ID= ENSG00000196476.11 TPM= 1.17 Transcript Type= protein_coding
chr20	296968	300321	296968	300321	+	ENST00000500893.3@ZCCHC3	ENST00000500893.3	protein_coding	296968	300321	Gene ID= ENSG00000247315.3 TPM= 79.4 Transcript Type= protein_coding
chr20	317392	318959	317392	318959	+	transcript11.chr20.nnic@NA	transcript11.chr20.nnic	NA	317392	318959	Gene ID= novel_gene_chr20_12 TPM= 2.34 Transcript Type= NA
chr20	325595	330224	325595	330224	+	ENST00000342665.4@SOX12	ENST00000342665.4	protein_coding	325595	330224	Gene ID= ENSG00000177732.8 TPM= 5.84 Transcript Type= protein_coding
chr20	349249	359660	349249	359660	+	ENST00000608736.1@NRSN2	ENST00000608736.1	protein_coding	349249,349638,359259	349363,349832,359660	Gene ID= ENSG00000125841.12 TPM= 1.17 Transcript Type= protein_coding
chr20	380617	397559	380617	397559	+	ENST00000217233.7@TRIB3	ENST00000217233.7	protein_coding	380617,388011,391287,396198	381169,388301,391579,397559	Gene ID= ENSG00000101255.10 TPM= 105.08 Transcript Type= protein_coding
chr20	408171	430966	408171	430966	+	ENST00000353660.7@RBCK1	ENST00000353660.7	protein_coding	408171,417526,417732,419347,419558,420871,422127,427313,428491,428951,430350	408779,417619,417930,419468,419731,421031,422238,427492,428589,429094,430966	Gene ID= ENSG00000125826.20 TPM= 12.04 Transcript Type= protein_coding
chr20	408053	430966	408053	430966	+	ENST00000356286.9@RBCK1	ENST00000356286.9	protein_coding	408053,409881,417526,417732,419347,419558,420871,422127,427313,428491,428951,430350	408779,410025,417619,417930,419468,419731,421031,422238,427492,428589,429094,430966	Gene ID= ENSG00000125826.20 TPM= 196.81 Transcript Type= protein_coding
chr20	408078	410764	408078	410764	+	ENST00000475269.5@RBCK1	ENST00000475269.5	protein_coding	408078,409881,410412	408779,410025,410764	Gene ID= ENSG00000125826.20 TPM= 24.52 Transcript Type= protein_coding
chr20	408343	410764	408343	410764	+	ENST00000400247.3@RBCK1	ENST00000400247.3	protein_coding	408343,410412	408779,410764	Gene ID= ENSG00000125826.20 TPM= 2.34 Transcript Type= protein_coding
chr20	409468	413150	409468	413150	-	transcript80.chr20.nnic@NA	transcript80.chr20.nnic	NA	409468	413150	Gene ID= novel_gene_chr20_81 TPM= 4.67 Transcript Type= NA
chr20	427820	430968	427820	430968	+	transcript78.chr20.nnic@NA	transcript78.chr20.nnic	NA	427820	430968	Gene ID= novel_gene_chr20_79 TPM= 2.78 Transcript Type= NA
chr20	435480	462564	435480	462564	-	transcript50.chr20.nic@TBC1D20	transcript50.chr20.nic	protein_coding	462336,447889,445050,441857,441588,440248,439108,438550,435480	462564,448074,445130,442043,441689,440389,439295,438841,437598	Gene ID= ENSG00000125875.13 TPM= 5.06 Transcript Type= NA
chr20	435480	462557	435480	462557	-	transcript64.chr20.nnic@TBC1D20	transcript64.chr20.nnic	protein_coding	462336,445050,441857,441588,440248,439108,435480	462557,445130,442043,441689,440389,439295,438841	Gene ID= ENSG00000125875.13 TPM= 6.42 Transcript Type= NA
chr20	435480	462553	435480	462553	-	ENST00000354200.4@TBC1D20	ENST00000354200.4	protein_coding	462336,447889,445050,441857,441588,440248,439108,435480	462553,448074,445130,442043,441689,440389,439295,438841	Gene ID= ENSG00000125875.13 TPM= 39.5 Transcript Type= protein_coding
chr20	436283	462543	436283	462543	-	ENST00000494633.1@TBC1D20	ENST00000494633.1	protein_coding	462336,447889,445050,441588,440248,439108,436283	462543,448074,445130,442043,440389,439295,438841	Gene ID= ENSG00000125875.13 TPM= 11.68 Transcript Type= processed_transcript
chr20	481097	543821	481097	543821	-	ENST00000217244.7@CSNK2A1	ENST00000217244.7	protein_coding	543672,527933,508451,505118,499833,499255,497721,495719,492254,489780,488678,487427,486376,481097	543821,528049,508660,505229,499934,499305,497780,495802,492364,489881,488778,487575,486462,484076	Gene ID= ENSG00000101266.17 TPM= 8.76 Transcript Type= protein_coding
chr20	481097	543821	481097	543821	-	ENST00000349736.9@CSNK2A1	ENST00000349736.9	protein_coding	543672,508451,505118,499833,499255,497721,495719,492254,489780,488678,487427,486376,481097	543821,508660,505229,499934,499305,497780,495802,492364,489881,488778,487575,486462,484076	Gene ID= ENSG00000101266.17 TPM= 5.25 Transcript Type= protein_coding
chr20	603797	610398	603797	610398	-	ENST00000246080.3@TCF15	ENST00000246080.3	protein_coding	609713,603797	610398,604665	Gene ID= ENSG00000125878.6 TPM= 1.17 Transcript Type= protein_coding
chr20	646615	653370	646615	653370	-	ENST00000381962.3@SRXN1	ENST00000381962.3	protein_coding	652976,646615	653370,648917	Gene ID= ENSG00000271303.1 TPM= 463.53 Transcript Type= protein_coding
chr20	760081	768584	760081	768584	-	ENST00000632431.1@SLC52A3	ENST00000632431.1	protein_coding	768297,765208,763498,761701,760081	768584,765825,764003,761824,761238	Gene ID= ENSG00000101276.14 TPM= 10.51 Transcript Type= protein_coding
chr20	760080	768504	760080	768504	-	transcript93.chr20.nic@SLC52A3	transcript93.chr20.nic	protein_coding	768297,765208,760080	768504,765825,764003	Gene ID= ENSG00000101276.14 TPM= 3.5 Transcript Type= NA
chr20	833715	846279	833715	846279	+	ENST00000381941.7@FAM110A	ENST00000381941.7	protein_coding	833715,844708	833951,846279	Gene ID= ENSG00000125898.12 TPM= 14.4 Transcript Type= protein_coding
chr20	833777	846279	833777	846279	+	ENST00000304189.6@FAM110A	ENST00000304189.6	protein_coding	833777,839455,844708	833951,839563,846279	Gene ID= ENSG00000125898.12 TPM= 3.89 Transcript Type= protein_coding
chr20	841275	846279	841275	846279	+	ENST00000541082.2@FAM110A	ENST00000541082.2	protein_coding	841275,844708	841316,846279	Gene ID= ENSG00000125898.12 TPM= 9.73 Transcript Type= protein_coding
chr20	837909	844738	837909	844738	-	transcript100.chr20.nnic@NA	transcript100.chr20.nnic	NA	837909	844738	Gene ID= novel_gene_chr20_101 TPM= 4.67 Transcript Type= NA
chr20	841485	846279	841485	846279	+	transcript98.chr20.nnic@NA	transcript98.chr20.nnic	NA	841485	846279	Gene ID= novel_gene_chr20_99 TPM= 7.01 Transcript Type= NA
chr20	844677	849283	844677	849283	-	transcript102.chr20.nnic@NA	transcript102.chr20.nnic	NA	844677	849283	Gene ID= novel_gene_chr20_103 TPM= 5.84 Transcript Type= NA
chr20	1118598	1168378	1118598	1168378	+	ENST00000335877.10@PSMF1	ENST00000335877.10	protein_coding	1118598,1125498,1127426,1135121,1163130,1164318,1165029	1118902,1125650,1127508,1135306,1163183,1164476,1168378	Gene ID= ENSG00000125818.17 TPM= 132.52 Transcript Type= protein_coding
chr20	1118598	1167328	1118598	1167328	+	ENST00000246015.8@PSMF1	ENST00000246015.8	protein_coding	1118598,1125498,1127426,1135121,1163130,1164318,1166227	1118902,1125650,1127508,1135306,1163183,1164476,1167328	Gene ID= ENSG00000125818.17 TPM= 42.62 Transcript Type= protein_coding
chr20	1118600	1138536	1118600	1138536	+	transcript122.chr20.nic@PSMF1	transcript122.chr20.nic	protein_coding	1118600,1125498,1127426,1135121	1118902,1125650,1127508,1138536	Gene ID= ENSG00000125818.17 TPM= 12.84 Transcript Type= NA
chr20	1133571	1135944	1133571	1135944	-	transcript125.chr20.nnic@NA	transcript125.chr20.nnic	NA	1133571	1135944	Gene ID= novel_gene_chr20_126 TPM= 5.84 Transcript Type= NA
chr20	1266316	1309328	1266316	1309328	+	ENST00000381873.7@SNPH	ENST00000381873.7	protein_coding	1266316,1266654,1296325,1297145,1300562,1304878	1266397,1266760,1296421,1297252,1300711,1309328	Gene ID= ENSG00000101298.13 TPM= 15.18 Transcript Type= protein_coding
chr20	1309975	1329239	1309975	1329239	-	ENST00000360779.3@SDCBP2	ENST00000360779.3	protein_coding	1329085,1320363,1319590,1318318,1313340,1312587,1312337,1310800,1309975	1329239,1320435,1319659,1318418,1313498,1312762,1312508,1310891,1310495	Gene ID= ENSG00000125775.14 TPM= 14.59 Transcript Type= protein_coding
chr20	1368978	1393162	1368978	1393162	-	ENST00000400137.8@FKBP1A	ENST00000400137.8	protein_coding	1392962,1392834,1375491,1372076,1368978	1393162,1392881,1375603,1372240,1370072	Gene ID= ENSG00000088832.16 TPM= 417.32 Transcript Type= protein_coding
chr20	1368979	1393172	1368979	1393172	-	ENST00000618612.4@FKBP1A	ENST00000618612.4	protein_coding	1392962,1392834,1372076,1368979	1393172,1392881,1372240,1370072	Gene ID= ENSG00000088832.16 TPM= 15.09 Transcript Type= protein_coding
chr20	1379912	1383701	1379912	1383701	+	transcript159.chr20.nnic@NA	transcript159.chr20.nnic	NA	1379912	1383701	Gene ID= novel_gene_chr20_160 TPM= 19.85 Transcript Type= NA
chr20	1443511	1466848	1443511	1466848	-	transcript163.chr20.nnic@NSFL1C	transcript163.chr20.nnic	protein_coding	1466720,1464329,1460905,1458200,1454967,1454213,1453031,1452493,1445666,1443511	1466848,1464426,1461003,1458274,1455132,1454305,1453140,1452630,1445830,1443911	Gene ID= ENSG00000088833.17 TPM= 4.67 Transcript Type= NA
chr20	1442162	1466905	1442162	1466905	-	ENST00000555944.5@NSFL1C	ENST00000555944.5	protein_coding	1466720,1458200,1454967,1454213,1453031,1452493,1445666,1442162	1466905,1458274,1455037,1454305,1453140,1452630,1445830,1443911	Gene ID= ENSG00000088833.17 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr20	1549887	1620048	1549887	1620048	-	transcript194.chr20.nic@AL049634.2	transcript194.chr20.nic	protein_coding	1619869,1578338,1549887	1620048,1578694,1552038	Gene ID= ENSG00000260861.6 TPM= 3.5 Transcript Type= NA
chr20	1564383	1619996	1564383	1619996	-	ENST00000381603.7@SIRPB1	ENST00000381603.7	protein_coding	1619869,1578338,1566153,1564383	1619996,1578694,1566267,1565497	Gene ID= ENSG00000101307.15 TPM= 4.67 Transcript Type= protein_coding
chr20	1894167	1939894	1894167	1939894	+	ENST00000400068.7@SIRPA	ENST00000400068.7	protein_coding	1894167,1895439,1915099,1921395,1922313,1924764,1927875,1934715,1937320	1894517,1895526,1915455,1921712,1922645,1924877,1927899,1934754,1939894	Gene ID= ENSG00000198053.11 TPM= 66.17 Transcript Type= protein_coding
chr20	1894885	1939894	1894885	1939894	+	transcript205.chr20.nnic@SIRPA	transcript205.chr20.nnic	protein_coding	1894885,1895439,1915099,1921395,1922313,1924764,1927875,1934715,1937320	1894966,1895526,1915455,1921712,1922645,1924877,1927899,1934754,1939894	Gene ID= ENSG00000198053.11 TPM= 35.23 Transcript Type= NA
chr20	1895296	1939897	1895296	1939897	+	ENST00000358771.4@SIRPA	ENST00000358771.4	protein_coding	1895296,1915099,1921395,1922313,1924764,1927875,1934715,1937320	1895526,1915455,1921712,1922645,1924877,1927899,1934754,1939897	Gene ID= ENSG00000198053.11 TPM= 31.14 Transcript Type= protein_coding
chr20	2101611	2148555	2101611	2148555	+	ENST00000381482.7@STK35	ENST00000381482.7	protein_coding	2101611,2102768,2116666,2143784	2102175,2103365,2117415,2148555	Gene ID= ENSG00000125834.12 TPM= 25.69 Transcript Type= protein_coding
chr20	2461634	2470853	2461634	2470853	-	ENST00000438552.6@SNRPB	ENST00000438552.6	protein_coding	2470688,2467607,2465708,2463747,2463089,2462636,2461634	2470853,2467758,2465819,2463899,2463227,2462761,2461793	Gene ID= ENSG00000125835.18 TPM= 42.03 Transcript Type= protein_coding
chr20	2461634	2470853	2461634	2470853	-	ENST00000381342.6@SNRPB	ENST00000381342.6	protein_coding	2470688,2467607,2465708,2463747,2463089,2462636,2461634	2470853,2467758,2465819,2463899,2463227,2462761,2461939	Gene ID= ENSG00000125835.18 TPM= 89.32 Transcript Type= protein_coding
chr20	2481823	2508920	2481823	2508920	-	transcript224.chr20.nic@ZNF343	transcript224.chr20.nic	protein_coding	2508881,2500656,2493778,2493519,2492699,2486641,2481823	2508920,2500742,2494044,2493577,2492825,2486763,2484656	Gene ID= ENSG00000088876.11 TPM= 5.84 Transcript Type= NA
chr20	2481817	2508936	2481817	2508936	-	transcript228.chr20.nic@ZNF343	transcript228.chr20.nic	protein_coding	2508800,2500656,2493778,2493519,2492699,2481817	2508936,2500742,2494044,2493577,2492825,2484656	Gene ID= ENSG00000088876.11 TPM= 5.84 Transcript Type= NA
chr20	2481817	2509132	2481817	2509132	-	ENST00000278772.8@ZNF343	ENST00000278772.8	protein_coding	2508881,2500656,2493778,2493519,2492699,2481817	2509132,2500742,2494044,2493577,2492825,2484656	Gene ID= ENSG00000088876.11 TPM= 7.01 Transcript Type= protein_coding
chr20	2624469	2643580	2624469	2643580	+	transcript234.chr20.nnic@TMC2	transcript234.chr20.nnic	protein_coding	2624469,2635926,2637474,2641134	2624531,2636004,2637591,2643580	Gene ID= ENSG00000149488.12 TPM= 2.92 Transcript Type= NA
chr20	2624453	2643580	2624453	2643580	+	transcript235.chr20.nnic@TMC2	transcript235.chr20.nnic	protein_coding	2624453,2637474,2641134	2624531,2637591,2643580	Gene ID= ENSG00000149488.12 TPM= 8.76 Transcript Type= NA
chr20	2652145	2658393	2652145	2658393	+	ENST00000329276.9@NOP56	ENST00000329276.9	protein_coding	2652145,2652842,2653279,2654414,2654749,2655325,2655595,2655934,2656401,2656774,2657081,2657929	2652663,2652931,2653393,2654575,2654947,2655512,2655746,2656034,2656549,2656895,2657218,2658393	Gene ID= ENSG00000101361.16 TPM= 39.7 Transcript Type= protein_coding
chr20	2658395	2664219	2658395	2664219	-	transcript239.chr20.nic@IDH3B	transcript239.chr20.nic	protein_coding	2664153,2663925,2663660,2663446,2660909,2660697,2660457,2660263,2660068,2659699,2659525,2658759,2658395	2664219,2664005,2663758,2663566,2660969,2660829,2660590,2660365,2660176,2659793,2659585,2658837,2658522	Gene ID= ENSG00000101365.20 TPM= 2.34 Transcript Type= NA
chr20	2658395	2664219	2658395	2664219	-	ENST00000380851.9@IDH3B	ENST00000380851.9	protein_coding	2664153,2663925,2663660,2663446,2660909,2660697,2660457,2660263,2660030,2659699,2659525,2658395	2664219,2664005,2663758,2663566,2660969,2660829,2660590,2660365,2660176,2659793,2659585,2658522	Gene ID= ENSG00000101365.20 TPM= 1.17 Transcript Type= protein_coding
chr20	2658395	2664219	2658395	2664219	-	ENST00000380843.8@IDH3B	ENST00000380843.8	protein_coding	2664153,2663925,2663660,2663446,2660909,2660697,2660457,2660263,2660030,2659699,2659525,2658395	2664219,2664005,2663758,2663566,2660969,2660829,2660590,2660365,2660176,2659793,2659585,2658837	Gene ID= ENSG00000101365.20 TPM= 82.32 Transcript Type= protein_coding
chr20	2658395	2664219	2658395	2664219	-	transcript251.chr20.nic@IDH3B	transcript251.chr20.nic	protein_coding	2664153,2663925,2663660,2663446,2660263,2660030,2659699,2659525,2658395	2664219,2664005,2663758,2663566,2660969,2660176,2659793,2659585,2658837	Gene ID= ENSG00000101365.20 TPM= 4.09 Transcript Type= NA
chr20	2658395	2664219	2658395	2664219	-	transcript252.chr20.nic@IDH3B	transcript252.chr20.nic	protein_coding	2664153,2663925,2663660,2663446,2660697,2660457,2659699,2659525,2658395	2664219,2664005,2663758,2663566,2660969,2660590,2660365,2659585,2658837	Gene ID= ENSG00000101365.20 TPM= 3.5 Transcript Type= NA
chr20	2658395	2664189	2658395	2664189	-	ENST00000474315.5@IDH3B	ENST00000474315.5	protein_coding	2664153,2663925,2663660,2663446,2660909,2660697,2660457,2660263,2660030,2659699,2659525,2658759,2658395	2664189,2664005,2663758,2663566,2660969,2660829,2660590,2660365,2660176,2659793,2659585,2658837,2658522	Gene ID= ENSG00000101365.20 TPM= 14.01 Transcript Type= protein_coding
chr20	2692879	2760101	2692879	2760101	+	ENST00000342725.9@EBF4	ENST00000342725.9	protein_coding	2692879,2693661,2705577,2705974,2706209,2707947,2709574,2748549,2749401,2749620,2749847,2751700,2751922,2752086,2752357,2755627,2758909,2759268	2692950,2693782,2705733,2706037,2706264,2708020,2709642,2748630,2749518,2749753,2749973,2751788,2751987,2752263,2752545,2755824,2758984,2760101	Gene ID= ENSG00000088881.20 TPM= 1.17 Transcript Type= protein_coding
chr20	2692878	2760107	2692878	2760107	+	ENST00000380648.8@EBF4	ENST00000380648.8	protein_coding	2692878,2693661,2705577,2705974,2706209,2707947,2709574,2748549,2749401,2749620,2749847,2751700,2751922,2752086,2752357,2755627,2758909,2759268	2693148,2693782,2705733,2706037,2706264,2708020,2709642,2748630,2749518,2749753,2749973,2751788,2751987,2752263,2752545,2755824,2758984,2760107	Gene ID= ENSG00000088881.20 TPM= 5.84 Transcript Type= protein_coding
chr20	2829602	2832129	2829602	2832129	+	transcript266.chr20.nnic@NA	transcript266.chr20.nnic	NA	2829602	2832129	Gene ID= novel_gene_chr20_267 TPM= 2.34 Transcript Type= NA
chr20	2835314	2840702	2835314	2840702	-	transcript306.chr20.nic@PCED1A	transcript306.chr20.nic	protein_coding	2840211,2839789,2839192,2838844,2838596,2838232,2836039,2835314	2840702,2839933,2839271,2838929,2838746,2838478,2836314,2835709	Gene ID= ENSG00000132635.16 TPM= 5.17 Transcript Type= NA
chr20	2835314	2840702	2835314	2840702	-	transcript307.chr20.nnic@PCED1A	transcript307.chr20.nnic	protein_coding	2840211,2839789,2839192,2838844,2838596,2838232,2836039,2835314	2840702,2839933,2839271,2838992,2838746,2838478,2836314,2835709	Gene ID= ENSG00000132635.16 TPM= 4 Transcript Type= NA
chr20	2835314	2841183	2835314	2841183	-	transcript310.chr20.nic@PCED1A	transcript310.chr20.nic	protein_coding	2840866,2839789,2839192,2838844,2838596,2838232,2836039,2835314	2841183,2839933,2839271,2839082,2838746,2838478,2836314,2835709	Gene ID= ENSG00000132635.16 TPM= 4 Transcript Type= NA
chr20	2835314	2840702	2835314	2840702	-	transcript311.chr20.nic@PCED1A	transcript311.chr20.nic	protein_coding	2840211,2839789,2838844,2838596,2838232,2836039,2835314	2840702,2839933,2839271,2838746,2838478,2836314,2835709	Gene ID= ENSG00000132635.16 TPM= 5.17 Transcript Type= NA
chr20	2835314	2840702	2835314	2840702	-	transcript312.chr20.nic@PCED1A	transcript312.chr20.nic	protein_coding	2840211,2839789,2839192,2838844,2838596,2838232,2835314	2840702,2839933,2839271,2839082,2838746,2838478,2835709	Gene ID= ENSG00000132635.16 TPM= 4.51 Transcript Type= NA
chr20	2835314	2840662	2835314	2840662	-	transcript315.chr20.nic@PCED1A	transcript315.chr20.nic	protein_coding	2838844,2838596,2838232,2836039,2835314	2840662,2838746,2838478,2836314,2835709	Gene ID= ENSG00000132635.16 TPM= 4.17 Transcript Type= NA
chr20	2835314	2838273	2835314	2838273	-	transcript317.chr20.nic@PCED1A	transcript317.chr20.nic	protein_coding	2836039,2835314	2838273,2835709	Gene ID= ENSG00000132635.16 TPM= 4.67 Transcript Type= NA
chr20	2835314	2840692	2835314	2840692	-	ENST00000360652.6@PCED1A	ENST00000360652.6	protein_coding	2840211,2839789,2839192,2838844,2838596,2838232,2836039,2835314	2840692,2839933,2839271,2839082,2838746,2838478,2836314,2835709	Gene ID= ENSG00000132635.16 TPM= 43.7 Transcript Type= protein_coding
chr20	2840703	2866732	2840703	2866732	+	ENST00000380445.7@VPS16	ENST00000380445.7	protein_coding	2840703,2859719,2860054,2860239,2860449,2860748,2860970,2861225,2861615,2861805,2862054,2862579,2862807,2863065,2863290,2863949,2864179,2864365,2864547,2864978,2865148,2865399,2866212,2866430	2840827,2859807,2860151,2860367,2860593,2860863,2861092,2861280,2861704,2861899,2862130,2862710,2862934,2863100,2863398,2864083,2864287,2864462,2864654,2865055,2865317,2865495,2866315,2866732	Gene ID= ENSG00000215305.9 TPM= 79.4 Transcript Type= protein_coding
chr20	2840701	2866732	2840701	2866732	+	transcript273.chr20.nic@VPS16	transcript273.chr20.nic	protein_coding	2840701,2859719,2860054,2860239,2860449,2860748,2860970,2861225,2861615,2861805,2862054,2862579,2863065,2863290,2863949,2864179,2864365,2864547,2864978,2865148,2865399,2866212,2866430	2840827,2859807,2860151,2860367,2860593,2860863,2861092,2861280,2861704,2861899,2862130,2862934,2863100,2863398,2864083,2864287,2864462,2864654,2865055,2865317,2865495,2866315,2866732	Gene ID= ENSG00000215305.9 TPM= 9.34 Transcript Type= NA
chr20	2873466	3038668	2873466	3038668	+	transcript346.chr20.nnic@PTPRA	transcript346.chr20.nnic	protein_coding	2873466,2923207,2964272,2964861,2975215,2986765,2988032,2988338,3005056,3007344,3015849,3017816,3021309,3022054,3022689,3024472,3026687,3027121,3027707,3035585,3035790,3037154,3038059	2873760,2923285,2964350,2965202,2975241,2986849,2988105,2988474,3005146,3007420,3015885,3017913,3021428,3022220,3022824,3024621,3026780,3027197,3027841,3035710,3035941,3037289,3038668	Gene ID= ENSG00000132670.20 TPM= 33.31 Transcript Type= NA
chr20	2873496	3038668	2873496	3038668	+	ENST00000399903.6@PTPRA	ENST00000399903.6	protein_coding	2873496,2923207,2947982,2964272,2964861,2975215,2986765,2988032,2988338,3005056,3007344,3015849,3017816,3021309,3022054,3022689,3024472,3026687,3027121,3027707,3035585,3035790,3037154,3038059	2873760,2923285,2948024,2964350,2965202,2975241,2986849,2988105,2988474,3005146,3007420,3015885,3017913,3021428,3022220,3022824,3024621,3026780,3027197,3027841,3035710,3035941,3037289,3038668	Gene ID= ENSG00000132670.20 TPM= 89.36 Transcript Type= protein_coding
chr20	2873489	3039076	2873489	3039076	+	ENST00000216877.10@PTPRA	ENST00000216877.10	protein_coding	2873489,2923207,2947982,2964272,2964861,2986765,2988032,2988338,3005056,3007344,3015849,3017816,3021309,3022054,3022689,3024472,3026687,3027121,3027707,3035585,3035790,3037154,3038059	2873760,2923285,2948024,2964350,2965202,2986849,2988105,2988474,3005146,3007420,3015885,3017913,3021428,3022220,3022824,3024621,3026780,3027197,3027841,3035710,3035941,3037289,3039076	Gene ID= ENSG00000132670.20 TPM= 4.76 Transcript Type= protein_coding
chr20	2873683	3038674	2873683	3038674	+	ENST00000318266.9@PTPRA	ENST00000318266.9	protein_coding	2873683,2923207,2947982,2955609,2964272,2964861,2986765,2988032,2988338,3005056,3007344,3015849,3017816,3021309,3022054,3022689,3024472,3026687,3027121,3027707,3035585,3035790,3037154,3038059	2873760,2923285,2948024,2955698,2964350,2965202,2986849,2988105,2988474,3005146,3007420,3015885,3017913,3021428,3022220,3022824,3024621,3026780,3027197,3027841,3035710,3035941,3037289,3038674	Gene ID= ENSG00000132670.20 TPM= 4.38 Transcript Type= protein_coding
chr20	3046050	3048247	3046050	3048247	+	transcript379.chr20.nnic@MRPS26	transcript379.chr20.nnic	protein_coding	3046050,3046373,3046614,3047735	3046280,3046519,3046900,3048247	Gene ID= ENSG00000125901.5 TPM= 2.34 Transcript Type= NA
chr20	3046030	3048254	3046030	3048254	+	transcript381.chr20.nic@MRPS26	transcript381.chr20.nic	protein_coding	3046030,3046373,3047735	3046280,3046737,3048254	Gene ID= ENSG00000125901.5 TPM= 7.01 Transcript Type= NA
chr20	3046061	3048246	3046061	3048246	+	transcript382.chr20.nic@MRPS26	transcript382.chr20.nic	protein_coding	3046061,3046373	3046280,3048246	Gene ID= ENSG00000125901.5 TPM= 3.5 Transcript Type= NA
chr20	3107575	3159902	3107575	3159902	-	transcript383.chr20.nnic@UBOX5	transcript383.chr20.nnic	protein_coding	3159766,3123312,3121384,3115305,3108804,3107575	3159902,3123406,3122584,3115466,3110314,3108262	Gene ID= ENSG00000185019.16 TPM= 3.3 Transcript Type= NA
chr20	3107573	3160196	3107573	3160196	-	ENST00000217173.6@UBOX5	ENST00000217173.6	protein_coding	3159766,3123312,3121384,3115305,3107573	3160196,3123406,3122584,3115466,3110314	Gene ID= ENSG00000185019.16 TPM= 8.56 Transcript Type= protein_coding
chr20	3107573	3160196	3107573	3160196	-	ENST00000348031.6@UBOX5	ENST00000348031.6	protein_coding	3159766,3123312,3121384,3107573	3160196,3123406,3122584,3110314	Gene ID= ENSG00000185019.16 TPM= 5.64 Transcript Type= protein_coding
chr20	3146519	3159897	3146519	3159897	-	ENST00000380266.3@FASTKD5	ENST00000380266.3	protein_coding	3159766,3146519	3159897,3149260	Gene ID= ENSG00000215251.3 TPM= 21.02 Transcript Type= protein_coding
chr20	3162617	3168304	3162617	3168304	-	transcript404.chr20.nnic@LZTS3	transcript404.chr20.nnic	protein_coding	3168078,3167738,3166705,3165497,3162617	3168304,3167961,3167181,3166360,3165152	Gene ID= ENSG00000088899.14 TPM= 4.67 Transcript Type= NA
chr20	3162618	3173592	3162618	3173592	-	ENST00000337576.6@LZTS3	ENST00000337576.6	protein_coding	3173455,3167738,3166705,3165497,3162618	3173592,3167961,3167181,3166360,3165152	Gene ID= ENSG00000088899.14 TPM= 15.18 Transcript Type= protein_coding
chr20	3162617	3168533	3162617	3168533	-	transcript406.chr20.nnic@LZTS3	transcript406.chr20.nnic	protein_coding	3168498,3167777,3166705,3165497,3162617	3168533,3167961,3167181,3166360,3165152	Gene ID= ENSG00000088899.14 TPM= 4.67 Transcript Type= NA
chr20	3162617	3173595	3162617	3173595	-	transcript407.chr20.nnic@LZTS3	transcript407.chr20.nnic	protein_coding	3173455,3167777,3166705,3165497,3162617	3173595,3167961,3167181,3166360,3165152	Gene ID= ENSG00000088899.14 TPM= 4.67 Transcript Type= NA
chr20	3162617	3173590	3162617	3173590	-	transcript419.chr20.nnic@LZTS3	transcript419.chr20.nnic	protein_coding	3173455,3166705,3165497,3162617	3173590,3167181,3166360,3165152	Gene ID= ENSG00000088899.14 TPM= 5.84 Transcript Type= NA
chr20	3190350	3204685	3190350	3204685	-	ENST00000354488.7@DDRGK1	ENST00000354488.7	protein_coding	3204537,3203213,3200342,3200001,3195231,3194830,3191765,3191190,3190350	3204685,3203416,3200454,3200102,3195353,3194868,3191821,3191238,3190819	Gene ID= ENSG00000198171.12 TPM= 32.11 Transcript Type= protein_coding
chr20	3208868	3223870	3208868	3223870	+	ENST00000483354.5@ITPA	ENST00000483354.5	protein_coding	3208868,3213169,3213985,3215281,3218517,3221841,3223366	3209033,3213226,3214058,3215312,3218632,3221917,3223870	Gene ID= ENSG00000125877.12 TPM= 3.5 Transcript Type= processed_transcript
chr20	3209360	3223870	3209360	3223870	+	ENST00000380113.7@ITPA	ENST00000380113.7	protein_coding	3209360,3213169,3213319,3213985,3215281,3218517,3221841,3223366	3209617,3213226,3213383,3214058,3215312,3218632,3221917,3223870	Gene ID= ENSG00000125877.12 TPM= 28.02 Transcript Type= protein_coding
chr20	3216459	3219090	3216459	3219090	-	transcript430.chr20.nnic@NA	transcript430.chr20.nnic	NA	3216459	3219090	Gene ID= novel_gene_chr20_431 TPM= 5.84 Transcript Type= NA
chr20	3219706	3220949	3219706	3220949	-	transcript432.chr20.nnic@NA	transcript432.chr20.nnic	NA	3219706	3220949	Gene ID= novel_gene_chr20_433 TPM= 4.67 Transcript Type= NA
chr20	3239700	3241433	3239700	3241433	+	transcript446.chr20.nnic@NA	transcript446.chr20.nnic	NA	3239700	3241433	Gene ID= novel_gene_chr20_447 TPM= 2.34 Transcript Type= NA
chr20	3249305	3407625	3249305	3407625	-	ENST00000252032.9@C20orf194	ENST00000252032.9	protein_coding	3407475,3382427,3381379,3376178,3375030,3374048,3359516,3348525,3343676,3340504,3332280,3330646,3326197,3324892,3322652,3322217,3318289,3316723,3315735,3315033,3304440,3298029,3296861,3294528,3294139,3290129,3287632,3281641,3278912,3270427,3264438,3259922,3259480,3256006,3255219,3253726,3249305	3407625,3382506,3381498,3376302,3375126,3374154,3359593,3348623,3343731,3340639,3332361,3330682,3326284,3324968,3322696,3322262,3318400,3316793,3315785,3315120,3304543,3298175,3296949,3294629,3294256,3290217,3287790,3281766,3278949,3270562,3264524,3260028,3259554,3256211,3255284,3253819,3252684	Gene ID= ENSG00000088854.12 TPM= 18.68 Transcript Type= protein_coding
chr20	3667970	3682246	3667970	3682246	-	ENST00000379861.8@ADAM33	ENST00000379861.8	protein_coding	3681908,3679492,3677067,3675027,3674773,3674504,3674219,3674064,3673745,3673574,3673354,3672721,3672537,3672134,3671877,3671581,3671419,3671237,3671006,3669546,3669299,3667970	3682246,3679571,3677143,3675105,3674849,3674693,3674284,3674135,3673911,3673658,3673496,3672898,3672626,3672329,3671985,3671779,3671496,3671345,3671153,3669637,3669370,3668997	Gene ID= ENSG00000149451.17 TPM= 14.01 Transcript Type= protein_coding
chr20	3702186	3712579	3702186	3712579	-	transcript468.chr20.nnic@SIGLEC1	transcript468.chr20.nnic	protein_coding	3712470,3707080,3706347,3705744,3703825,3702186	3712579,3707234,3706706,3706040,3704091,3703451	Gene ID= ENSG00000088827.12 TPM= 3.5 Transcript Type= NA
chr20	3702946	3712600	3702946	3712600	-	transcript469.chr20.nnic@SIGLEC1	transcript469.chr20.nnic	protein_coding	3712438,3707080,3706347,3705744,3703825,3702946	3712600,3707234,3706706,3706040,3704091,3703451	Gene ID= ENSG00000088827.12 TPM= 3.5 Transcript Type= NA
chr20	3732550	3753111	3732550	3753111	+	transcript492.chr20.nnic@HSPA12B	transcript492.chr20.nnic	protein_coding	3732550,3738658,3740815,3742284,3744902,3745493,3745915,3748217,3749232,3749508,3749969,3750804,3751511	3732794,3738717,3740912,3742408,3745088,3745597,3746031,3748391,3749318,3749854,3750227,3750907,3753111	Gene ID= ENSG00000132622.10 TPM= 16.68 Transcript Type= NA
chr20	3732667	3753111	3732667	3753111	+	ENST00000254963.6@HSPA12B	ENST00000254963.6	protein_coding	3732667,3738658,3740815,3742284,3744902,3745493,3745915,3748217,3749232,3749750,3749969,3750804,3751511	3732794,3738717,3740912,3742408,3745088,3745597,3746031,3748391,3749318,3749854,3750227,3750907,3753111	Gene ID= ENSG00000132622.10 TPM= 141.71 Transcript Type= protein_coding
chr20	3732711	3753111	3732711	3753111	+	ENST00000399701.1@HSPA12B	ENST00000399701.1	protein_coding	3732711,3738658,3742284,3744902,3745493,3745915,3748217,3749232,3749750,3749969,3750804,3751511	3732794,3738717,3742408,3745088,3745597,3746031,3748391,3749318,3749854,3750227,3750907,3753111	Gene ID= ENSG00000132622.10 TPM= 35.46 Transcript Type= protein_coding
chr20	3735465	3737341	3735465	3737341	-	transcript520.chr20.nnic@NA	transcript520.chr20.nnic	NA	3735465	3737341	Gene ID= novel_gene_chr20_521 TPM= 2.34 Transcript Type= NA
chr20	3753508	3768387	3753508	3768387	-	ENST00000379772.3@C20orf27	ENST00000379772.3	protein_coding	3767663,3760082,3758536,3755469,3754397,3753508	3768387,3760186,3758678,3755607,3754519,3754158	Gene ID= ENSG00000101220.17 TPM= 61.3 Transcript Type= protein_coding
chr20	3753508	3767728	3753508	3767728	-	ENST00000217195.12@C20orf27	ENST00000217195.12	protein_coding	3767663,3760007,3758536,3755469,3754397,3753508	3767728,3760186,3758678,3755607,3754519,3754158	Gene ID= ENSG00000101220.17 TPM= 6.42 Transcript Type= protein_coding
chr20	3777504	3781448	3777504	3781448	-	ENST00000379756.3@SPEF1	ENST00000379756.3	protein_coding	3781179,3779664,3779196,3778951,3778746,3778421,3777504	3781448,3779775,3779352,3778990,3778806,3778544,3778319	Gene ID= ENSG00000101222.12 TPM= 1.17 Transcript Type= protein_coding
chr20	3783851	3786718	3783851	3786718	-	transcript539.chr20.nnic@CENPB	transcript539.chr20.nnic	protein_coding	3784512,3783851	3786718,3784075	Gene ID= ENSG00000125817.7 TPM= 2.34 Transcript Type= NA
chr20	3783851	3786690	3783851	3786690	-	ENST00000379751.4@CENPB	ENST00000379751.4	protein_coding	3783851	3786690	Gene ID= ENSG00000125817.7 TPM= 42.03 Transcript Type= protein_coding
chr20	3785986	3788143	3785986	3788143	+	transcript540.chr20.nnic@NA	transcript540.chr20.nnic	NA	3785986	3788143	Gene ID= novel_gene_chr20_541 TPM= 3.5 Transcript Type= NA
chr20	3786772	3806121	3786772	3806121	+	ENST00000344256.10@CDC25B	ENST00000344256.10	protein_coding	3786772,3797622,3798412,3800288,3800462,3800743,3800971,3801254,3801722,3801924,3802281,3802910,3803108,3803404,3804569,3804821	3787139,3797749,3798463,3800329,3800498,3800865,3801093,3801388,3801802,3802100,3802376,3802972,3803206,3803537,3804680,3806121	Gene ID= ENSG00000101224.17 TPM= 18.59 Transcript Type= protein_coding
chr20	3795835	3806118	3795835	3806118	+	ENST00000245960.9@CDC25B	ENST00000245960.9	protein_coding	3795835,3797622,3798412,3800288,3800462,3800743,3800971,3801254,3801722,3801924,3802281,3802910,3803108,3803404,3804569,3804821	3796731,3797749,3798463,3800329,3800498,3800865,3801093,3801388,3801802,3802100,3802376,3802972,3803206,3803537,3804680,3806118	Gene ID= ENSG00000101224.17 TPM= 55.31 Transcript Type= protein_coding
chr20	3796291	3806115	3796291	3806115	+	ENST00000439880.6@CDC25B	ENST00000439880.6	protein_coding	3796291,3797664,3798412,3800288,3800462,3800743,3800971,3801254,3801722,3801924,3802281,3802910,3803108,3803404,3804569,3804821	3796731,3797749,3798463,3800329,3800498,3800865,3801093,3801388,3801802,3802100,3802376,3802972,3803206,3803537,3804680,3806115	Gene ID= ENSG00000101224.17 TPM= 39.93 Transcript Type= protein_coding
chr20	3796827	3806115	3796827	3806115	+	transcript530.chr20.nic@CDC25B	transcript530.chr20.nic	protein_coding	3796827,3798412,3800288,3800462,3800743,3800971,3801254,3801722,3801924,3802281,3802730,3802910,3803108,3803404,3804569,3804821	3797749,3798463,3800329,3800498,3800865,3801093,3801388,3801802,3802100,3802376,3802808,3802972,3803206,3803537,3804680,3806115	Gene ID= ENSG00000101224.17 TPM= 15.03 Transcript Type= NA
chr20	3796619	3806115	3796619	3806115	+	transcript533.chr20.nic@CDC25B	transcript533.chr20.nic	protein_coding	3796619,3798412,3800288,3800462,3800743,3800971,3801254,3801722,3801924,3802281,3802910,3803108,3803404,3804569,3804821	3797749,3798463,3800329,3800498,3800865,3801093,3801388,3801802,3802100,3802376,3802972,3803206,3803537,3804680,3806115	Gene ID= ENSG00000101224.17 TPM= 52.19 Transcript Type= NA
chr20	3795739	3805237	3795739	3805237	+	ENST00000467519.5@CDC25B	ENST00000467519.5	protein_coding	3795739,3797622,3798412,3800288,3800462,3800743,3800971,3801254,3801722,3801924,3802281,3802910,3803108,3803404,3804569,3804821	3795879,3797749,3798463,3800329,3800498,3800865,3801093,3801388,3801802,3802100,3802376,3802972,3803206,3803537,3804680,3805237	Gene ID= ENSG00000101224.17 TPM= 1.37 Transcript Type= processed_transcript
chr20	3820524	3825307	3820524	3825307	+	ENST00000246041.6@AP5S1	ENST00000246041.6	protein_coding	3820524,3822102,3823871	3820854,3822293,3825307	Gene ID= ENSG00000125843.10 TPM= 1.55 Transcript Type= protein_coding
chr20	3820531	3825302	3820531	3825302	+	ENST00000379573.6@AP5S1	ENST00000379573.6	protein_coding	3820531,3822102,3823875	3820758,3822293,3825302	Gene ID= ENSG00000125843.10 TPM= 10.89 Transcript Type= protein_coding
chr20	3820536	3825302	3820536	3825302	+	ENST00000379567.6@AP5S1	ENST00000379567.6	protein_coding	3820536,3822102,3823871	3820702,3822293,3825302	Gene ID= ENSG00000125843.10 TPM= 5.06 Transcript Type= protein_coding
chr20	3853955	3856212	3853955	3856212	-	transcript589.chr20.nnic@NA	transcript589.chr20.nnic	NA	3853955	3856212	Gene ID= novel_gene_chr20_590 TPM= 3.5 Transcript Type= NA
chr20	3870254	3875451	3870254	3875451	+	transcript585.chr20.nnic@NA	transcript585.chr20.nnic	NA	3870254	3875451	Gene ID= novel_gene_chr20_586 TPM= 25.69 Transcript Type= NA
chr20	3889095	3923855	3889095	3923855	+	ENST00000316562.8@PANK2	ENST00000316562.8	protein_coding	3889095,3907926,3910577,3912458,3916927,3918671,3923244	3889728,3908278,3910830,3912634,3917050,3918796,3923855	Gene ID= ENSG00000125779.21 TPM= 5.84 Transcript Type= protein_coding
chr20	3889388	3912954	3889388	3912954	+	transcript579.chr20.nic@PANK2	transcript579.chr20.nic	protein_coding	3889388,3907926,3910577,3912458	3889728,3908135,3910830,3912954	Gene ID= ENSG00000125779.21 TPM= 2.34 Transcript Type= NA
chr20	3889334	3908646	3889334	3908646	+	transcript584.chr20.nic@PANK2	transcript584.chr20.nic	protein_coding	3889334,3907926	3889728,3908646	Gene ID= ENSG00000125779.21 TPM= 4.67 Transcript Type= NA
chr20	3889415	3923702	3889415	3923702	+	ENST00000610179.5@PANK2	ENST00000610179.5	protein_coding	3889415,3907926,3910577,3912458,3916927,3918671,3923244	3889728,3908278,3910830,3912634,3917050,3918796,3923702	Gene ID= ENSG00000125779.21 TPM= 15.18 Transcript Type= protein_coding
chr20	3933064	4015591	3933064	4015591	-	transcript591.chr20.nnic@RNF24	transcript591.chr20.nnic	protein_coding	4015437,3963875,3948237,3945177,3934994,3934852,3933064	4015591,3964024,3948279,3945218,3935073,3934920,3934201	Gene ID= ENSG00000101236.16 TPM= 2.72 Transcript Type= NA
chr20	3933064	4015595	3933064	4015595	-	transcript596.chr20.nnic@RNF24	transcript596.chr20.nnic	protein_coding	4015201,3963875,3948237,3945177,3934994,3933064	4015595,3964024,3948279,3945218,3935073,3934201	Gene ID= ENSG00000101236.16 TPM= 2.72 Transcript Type= NA
chr20	3933064	4015591	3933064	4015591	-	transcript598.chr20.nnic@RNF24	transcript598.chr20.nnic	protein_coding	4015437,3948237,3945177,3934994,3933064	4015591,3948279,3945218,3935073,3934201	Gene ID= ENSG00000101236.16 TPM= 2.72 Transcript Type= NA
chr20	3933567	4015545	3933567	4015545	-	ENST00000545616.2@RNF24	ENST00000545616.2	protein_coding	4015437,3974332,3963875,3948237,3945177,3934994,3933567	4015545,3974400,3964024,3948279,3945218,3935073,3934201	Gene ID= ENSG00000101236.16 TPM= 1.17 Transcript Type= protein_coding
chr20	4148779	4187747	4148779	4187747	+	ENST00000339123.10@SMOX	ENST00000339123.10	protein_coding	4148779,4175030,4177351,4181803,4182089,4182483,4183494,4187270	4148977,4175263,4177577,4181976,4182323,4182848,4183654,4187747	Gene ID= ENSG00000088826.17 TPM= 1.75 Transcript Type= protein_coding
chr20	4148779	4187747	4148779	4187747	+	ENST00000305958.8@SMOX	ENST00000305958.8	protein_coding	4148779,4175030,4177351,4181803,4182089,4183494,4187270	4148977,4175263,4177577,4181976,4182848,4183654,4187747	Gene ID= ENSG00000088826.17 TPM= 9.92 Transcript Type= protein_coding
chr20	4686236	4701590	4686236	4701590	+	ENST00000379440.8@PRNP	ENST00000379440.8	protein_coding	4686236,4699211	4686512,4701590	Gene ID= ENSG00000171867.16 TPM= 207.83 Transcript Type= protein_coding
chr20	4686350	4701590	4686350	4701590	+	ENST00000430350.2@PRNP	ENST00000430350.2	protein_coding	4686350,4699211	4686508,4701590	Gene ID= ENSG00000171867.16 TPM= 158.79 Transcript Type= protein_coding
chr20	4780026	4823557	4780026	4823557	-	transcript620.chr20.nnic@RASSF2	transcript620.chr20.nnic	protein_coding	4823315,4822329,4800972,4798010,4795815,4792539,4790451,4789596,4788217,4787633,4786231,4780026	4823557,4822403,4801062,4798085,4795966,4792627,4790611,4789697,4788268,4787754,4786328,4784342	Gene ID= ENSG00000101265.15 TPM= 31.53 Transcript Type= NA
chr20	4780023	4823645	4780023	4823645	-	ENST00000379400.7@RASSF2	ENST00000379400.7	protein_coding	4823557,4822329,4800972,4798010,4795815,4792539,4790451,4789596,4788217,4787633,4786231,4780023	4823645,4822403,4801062,4798085,4795966,4792627,4790611,4789697,4788268,4787754,4786328,4784342	Gene ID= ENSG00000101265.15 TPM= 23.35 Transcript Type= protein_coding
chr20	5099840	5113056	5099840	5113056	-	transcript634.chr20.nnic@TMEM230	transcript634.chr20.nnic	protein_coding	5112730,5111500,5109332,5106188,5099840	5113056,5111605,5109445,5106310,5100931	Gene ID= ENSG00000089063.14 TPM= 7.08 Transcript Type= NA
chr20	5099840	5113042	5099840	5113042	-	ENST00000379286.6@TMEM230	ENST00000379286.6	protein_coding	5112743,5111500,5109332,5106188,5099840	5113042,5111605,5109445,5106310,5100931	Gene ID= ENSG00000089063.14 TPM= 2.41 Transcript Type= protein_coding
chr20	5099840	5113087	5099840	5113087	-	ENST00000342308.9@TMEM230	ENST00000342308.9	protein_coding	5112961,5111500,5109332,5106188,5099840	5113087,5111605,5109445,5106310,5100931	Gene ID= ENSG00000089063.14 TPM= 7.08 Transcript Type= protein_coding
chr20	5099840	5113101	5099840	5113101	-	transcript638.chr20.nnic@TMEM230	transcript638.chr20.nnic	protein_coding	5112961,5109332,5106188,5099840	5113101,5109445,5106222,5100931	Gene ID= ENSG00000089063.14 TPM= 8.41 Transcript Type= NA
chr20	5099840	5113049	5099840	5113049	-	ENST00000379279.6@TMEM230	ENST00000379279.6	protein_coding	5112743,5109332,5106188,5099840	5113049,5109445,5106310,5100931	Gene ID= ENSG00000089063.14 TPM= 32.76 Transcript Type= protein_coding
chr20	5099840	5113103	5099840	5113103	-	ENST00000202834.11@TMEM230	ENST00000202834.11	protein_coding	5112961,5109332,5106188,5099840	5113103,5109445,5106310,5100931	Gene ID= ENSG00000089063.14 TPM= 158.86 Transcript Type= protein_coding
chr20	5099840	5113042	5099840	5113042	-	ENST00000379299.6@TMEM230	ENST00000379299.6	protein_coding	5112730,5109332,5106188,5099840	5113042,5109445,5106310,5100931	Gene ID= ENSG00000089063.14 TPM= 49.11 Transcript Type= protein_coding
chr20	5099840	5113050	5099840	5113050	-	ENST00000379283.6@TMEM230	ENST00000379283.6	protein_coding	5112720,5109332,5106188,5099840	5113050,5109445,5106310,5100931	Gene ID= ENSG00000089063.14 TPM= 10.58 Transcript Type= protein_coding
chr20	5114953	5126626	5114953	5126626	-	ENST00000379160.3@PCNA	ENST00000379160.3	protein_coding	5126500,5119578,5118769,5118610,5117470,5115449,5114953	5126626,5119914,5118866,5118677,5117664,5115572,5115362	Gene ID= ENSG00000132646.10 TPM= 14.01 Transcript Type= protein_coding
chr20	5114953	5120026	5114953	5120026	-	ENST00000379143.9@PCNA	ENST00000379143.9	protein_coding	5119578,5118769,5118610,5117470,5115449,5114953	5120026,5118866,5118677,5117664,5115572,5115362	Gene ID= ENSG00000132646.10 TPM= 25.69 Transcript Type= protein_coding
chr20	5126786	5197887	5126786	5197887	+	ENST00000460006.5@CDS2	ENST00000460006.5	protein_coding	5126786,5173523,5175183,5176648,5178817,5182387,5183061,5184858,5185758,5186687,5189067,5189735,5190102	5127149,5173659,5175279,5176745,5178956,5182445,5183143,5184945,5185826,5186839,5189186,5189838,5197887	Gene ID= ENSG00000101290.13 TPM= 49.04 Transcript Type= protein_coding
chr20	5206451	5210581	5206451	5210581	-	transcript672.chr20.nnic@NA	transcript672.chr20.nnic	NA	5206451	5210581	Gene ID= novel_gene_chr20_673 TPM= 3.5 Transcript Type= NA
chr20	5494303	5496594	5494303	5496594	-	transcript674.chr20.nnic@NA	transcript674.chr20.nnic	NA	5494303	5496594	Gene ID= novel_gene_chr20_675 TPM= 2.34 Transcript Type= NA
chr20	5496067	5504613	5496067	5504613	-	ENST00000379053.4@LINC00654	ENST00000379053.4	lincRNA	5504298,5496067	5504613,5501863	Gene ID= ENSG00000205181.5 TPM= 1.17 Transcript Type= lincRNA
chr20	5546458	5611023	5546458	5611023	-	transcript682.chr20.nnic@GPCPD1	transcript682.chr20.nnic	protein_coding	5610842,5609640,5604364,5598725,5593327,5586194,5584281,5580008,5578380,5575816,5575413,5573915,5570147,5567483,5566733,5565017,5561465,5559940,5558684,5557945,5546458	5611023,5609811,5604440,5598821,5593411,5586269,5584322,5580131,5578611,5575978,5575545,5573969,5570239,5567560,5566772,5565078,5561530,5560076,5558819,5558105,5547850	Gene ID= ENSG00000125772.12 TPM= 6.13 Transcript Type= NA
chr20	5544404	5611026	5544404	5611026	-	ENST00000379019.5@GPCPD1	ENST00000379019.5	protein_coding	5610842,5604364,5598725,5593327,5586194,5584281,5580008,5578380,5575816,5575413,5573915,5570147,5567483,5566733,5565017,5561465,5559940,5558684,5557945,5544404	5611026,5604440,5598821,5593411,5586269,5584322,5580131,5578611,5575978,5575545,5573969,5570239,5567560,5566772,5565078,5561530,5560076,5558819,5558105,5547850	Gene ID= ENSG00000125772.12 TPM= 19.27 Transcript Type= protein_coding
chr20	5546458	5611029	5546458	5611029	-	transcript691.chr20.nic@GPCPD1	transcript691.chr20.nic	protein_coding	5610842,5604364,5598725,5593327,5584281,5580008,5578380,5575816,5575413,5573915,5570147,5567483,5566733,5565017,5561465,5559940,5558684,5557945,5546458	5611029,5604440,5598821,5593411,5584322,5580131,5578611,5575978,5575545,5573969,5570239,5567560,5566772,5565078,5561530,5560076,5558819,5558105,5547850	Gene ID= ENSG00000125772.12 TPM= 6.13 Transcript Type= NA
chr20	5557851	5611029	5557851	5611029	-	transcript693.chr20.nic@GPCPD1	transcript693.chr20.nic	protein_coding	5610842,5604364,5598725,5593327,5586194,5584281,5580008,5578380,5575816,5575413,5573915,5570147,5567483,5566733,5565017,5561465,5559940,5558684,5557851	5611029,5604440,5598821,5593411,5586269,5584322,5580131,5578611,5575978,5575545,5573969,5570239,5567560,5566772,5565078,5561530,5560076,5558819,5558105	Gene ID= ENSG00000125772.12 TPM= 11.09 Transcript Type= NA
chr20	5584096	5590551	5584096	5590551	+	transcript696.chr20.nnic@NA	transcript696.chr20.nnic	NA	5584096	5590551	Gene ID= novel_gene_chr20_697 TPM= 72.39 Transcript Type= NA
chr20	5605638	5609861	5605638	5609861	+	transcript698.chr20.nnic@NA	transcript698.chr20.nnic	NA	5605638	5609861	Gene ID= novel_gene_chr20_699 TPM= 11.68 Transcript Type= NA
chr20	5750397	5863912	5750397	5863912	+	ENST00000303142.10@C20orf196	ENST00000303142.10	protein_coding	5750397,5772862,5863024	5750479,5773043,5863912	Gene ID= ENSG00000171984.14 TPM= 3.5 Transcript Type= protein_coding
chr20	5937833	5950536	5937833	5950536	-	ENST00000203001.6@TRMT6	ENST00000203001.6	protein_coding	5950278,5946406,5944805,5944162,5943948,5943559,5942428,5941951,5941243,5941053,5937833	5950536,5946533,5944914,5944253,5944031,5943683,5942786,5942036,5941345,5941139,5938726	Gene ID= ENSG00000089195.14 TPM= 18.68 Transcript Type= protein_coding
chr20	6006052	6038044	6006052	6038044	+	transcript720.chr20.nnic@CRLS1	transcript720.chr20.nnic	protein_coding	6006052,6009775,6015361,6026171,6031285,6032012,6034464,6037074	6006552,6009912,6015490,6026238,6031370,6032080,6034555,6038044	Gene ID= ENSG00000088766.11 TPM= 2.34 Transcript Type= NA
chr20	6006070	6038044	6006070	6038044	+	transcript728.chr20.nnic@CRLS1	transcript728.chr20.nnic	protein_coding	6006070,6009775,6015361,6031285,6032012,6034464,6037074	6006834,6009912,6015490,6031370,6032080,6034555,6038044	Gene ID= ENSG00000088766.11 TPM= 2.34 Transcript Type= NA
chr20	6006105	6037393	6006105	6037393	+	transcript733.chr20.nnic@CRLS1	transcript733.chr20.nnic	protein_coding	6006105,6009775,6031285,6032012,6034464,6037074	6006552,6009912,6031370,6032080,6034555,6037393	Gene ID= ENSG00000088766.11 TPM= 2.34 Transcript Type= NA
chr20	6006052	6018237	6006052	6018237	+	transcript751.chr20.nic@CRLS1	transcript751.chr20.nic	protein_coding	6006052,6009775,6015361	6006552,6009912,6018237	Gene ID= ENSG00000088766.11 TPM= 2.34 Transcript Type= NA
chr20	6006090	6040053	6006090	6040053	+	ENST00000378863.8@CRLS1	ENST00000378863.8	protein_coding	6006090,6009775,6015361,6031285,6032012,6034464,6037074	6006552,6009912,6015490,6031370,6032080,6034555,6040053	Gene ID= ENSG00000088766.11 TPM= 5.84 Transcript Type= protein_coding
chr20	6011574	6016577	6011574	6016577	-	transcript759.chr20.nnic@NA	transcript759.chr20.nnic	NA	6011574	6016577	Gene ID= novel_gene_chr20_760 TPM= 16.35 Transcript Type= NA
chr20	6040778	6054193	6040778	6054193	-	transcript745.chr20.nnic@LRRN4	transcript745.chr20.nnic	protein_coding	6053830,6052145,6050779,6044543,6040778	6054193,6052804,6050983,6044680,6041901	Gene ID= ENSG00000125872.7 TPM= 6.42 Transcript Type= NA
chr20	6050205	6054005	6050205	6054005	-	transcript753.chr20.nic@LRRN4	transcript753.chr20.nic	protein_coding	6053830,6052145,6050205	6054005,6052804,6050983	Gene ID= ENSG00000125872.7 TPM= 7.01 Transcript Type= NA
chr20	6040778	6054049	6040778	6054049	-	ENST00000378858.4@LRRN4	ENST00000378858.4	protein_coding	6053830,6052145,6050779,6044543,6040778	6054049,6052804,6050983,6044680,6042246	Gene ID= ENSG00000125872.7 TPM= 60.71 Transcript Type= protein_coding
chr20	6767687	6779959	6767687	6779959	+	transcript774.chr20.nnic@BMP2	transcript774.chr20.nnic	protein_coding	6767687,6778245	6768875,6779959	Gene ID= ENSG00000125845.6 TPM= 2.34 Transcript Type= NA
chr20	6767664	6780280	6767664	6780280	+	ENST00000378827.4@BMP2	ENST00000378827.4	protein_coding	6767664,6770120,6778245	6768875,6770472,6780280	Gene ID= ENSG00000125845.6 TPM= 24.52 Transcript Type= protein_coding
chr20	6780766	6782840	6780766	6782840	+	transcript776.chr20.nnic@NA	transcript776.chr20.nnic	NA	6780766	6782840	Gene ID= novel_gene_chr20_777 TPM= 2.34 Transcript Type= NA
chr20	7977348	8019829	7977348	8019829	-	ENST00000246024.6@TMX4	ENST00000246024.6	protein_coding	8019438,8010200,8001496,7999732,7996026,7987288,7983794,7977348	8019829,8010315,8001541,7999860,7996071,7987389,7983857,7982621	Gene ID= ENSG00000125827.8 TPM= 36.2 Transcript Type= protein_coding
chr20	8628288	8884896	8628288	8884896	+	ENST00000612075.4@PLCB1	ENST00000612075.4	protein_coding	8628288,8646102,8647900,8649374,8657184,8658538,8684932,8697626,8708670,8716264,8717671,8722354,8724656,8727309,8729050,8733238,8737028,8739261,8740344,8741464,8757046,8760407,8765139,8774539,8788449,8788633,8789518,8790175,8802056,8881622	8628431,8646181,8647953,8649449,8657284,8658704,8685078,8697783,8708752,8716348,8717848,8722421,8724752,8727393,8729174,8733392,8737192,8739360,8740448,8741573,8757178,8760460,8765358,8774719,8788525,8788722,8789575,8790261,8802173,8884896	Gene ID= ENSG00000182621.17 TPM= 5.84 Transcript Type= protein_coding
chr20	8132265	8884903	8132265	8884903	+	ENST00000338037.10@PLCB1	ENST00000338037.10	protein_coding	8132265,8150294,8371382,8628294,8646102,8647900,8649374,8657184,8658538,8684932,8697626,8708670,8716264,8717671,8722354,8724656,8727309,8729050,8733238,8737028,8739261,8740344,8741464,8757046,8760407,8765139,8774539,8788449,8788633,8789518,8790175,8881622	8132750,8150371,8371450,8628431,8646181,8647953,8649449,8657284,8658704,8685078,8697783,8708752,8716348,8717848,8722421,8724752,8727393,8729174,8733392,8737192,8739360,8740448,8741573,8757178,8760460,8765358,8774719,8788525,8788722,8789575,8790261,8884903	Gene ID= ENSG00000182621.17 TPM= 3.5 Transcript Type= protein_coding
chr20	8132270	8653531	8132270	8653531	+	ENST00000629992.2@PLCB1	ENST00000629992.2	protein_coding	8132270,8150294,8371382,8628294,8646102,8647900,8649374,8651413	8132750,8150371,8371450,8628431,8646181,8647953,8649449,8653531	Gene ID= ENSG00000182621.17 TPM= 1.17 Transcript Type= protein_coding
chr20	9068544	9480474	9068544	9480474	+	transcript791.chr20.nic@PLCB4	transcript791.chr20.nic	protein_coding	9068544,9096287,9217390,9307800,9337126,9338008,9338894,9362896,9365461,9371214,9372303,9373047,9380054,9384201,9387463,9389879,9390531,9393588,9395523,9401490,9407917,9408633,9409057,9411037,9419807,9421297,9423748,9435560,9437002,9443981,9444178,9453347,9457414,9459635,9468571,9472790,9473279,9476717,9478921	9068903,9096342,9217452,9307898,9337206,9338067,9339037,9362975,9365514,9371295,9372403,9373104,9380162,9384411,9387556,9389958,9390615,9393678,9395618,9401590,9408058,9408717,9409181,9411088,9419909,9421461,9423952,9435648,9437152,9444030,9444243,9453462,9457489,9459810,9468672,9472847,9473365,9476753,9480474	Gene ID= ENSG00000101333.16 TPM= 7.01 Transcript Type= NA
chr20	9068534	9366418	9068534	9366418	+	transcript795.chr20.nic@PLCB4	transcript795.chr20.nic	protein_coding	9068534,9217390,9307800,9337126,9338008,9338894,9362896,9365461	9068903,9217452,9307898,9337206,9338067,9339037,9362975,9366418	Gene ID= ENSG00000101333.16 TPM= 2.34 Transcript Type= NA
chr20	9514361	9530524	9514361	9530524	+	ENST00000246070.2@LAMP5	ENST00000246070.2	protein_coding	9514361,9515453,9516000,9516256,9518040,9529642	9514916,9515625,9516131,9516361,9518228,9530524	Gene ID= ENSG00000125869.9 TPM= 3.5 Transcript Type= protein_coding
chr20	9986088	10007116	9986088	10007116	+	ENST00000449270.1@AL109754.1	ENST00000449270.1	lincRNA	9986088,10006513	9986519,10007116	Gene ID= ENSG00000243961.2 TPM= 19.85 Transcript Type= lincRNA
chr20	10035049	10058303	10035049	10058303	+	ENST00000378380.4@ANKEF1	ENST00000378380.4	protein_coding	10035049,10038258,10043122,10044394,10045574,10049390,10051663,10053112,10054462,10055502	10035333,10038647,10043321,10044543,10045697,10050212,10051889,10053275,10054599,10058303	Gene ID= ENSG00000132623.15 TPM= 5.84 Transcript Type= protein_coding
chr20	10218833	10307418	10218833	10307418	+	ENST00000304886.6@SNAP25	ENST00000304886.6	protein_coding	10218833,10275429,10277685,10284724,10292882,10296925,10299268,10306129	10218977,10275563,10277726,10284772,10292999,10297050,10299412,10307418	Gene ID= ENSG00000132639.12 TPM= 2.34 Transcript Type= protein_coding
chr20	10413520	10434255	10413520	10434255	-	transcript814.chr20.nic@MKKS	transcript814.chr20.nic	protein_coding	10434108,10420528,10413520	10434255,10420758,10413931	Gene ID= ENSG00000125863.18 TPM= 3.5 Transcript Type= NA
chr20	10637684	10674107	10637684	10674107	-	ENST00000254958.9@JAG1	ENST00000254958.9	protein_coding	10673450,10672701,10663963,10658468,10656398,10652468,10652131,10651581,10650247,10649522,10649061,10648549,10647960,10646939,10645971,10645356,10645143,10644863,10644357,10643778,10642488,10641783,10641460,10641113,10640783,10637684	10674107,10673006,10664014,10658722,10656458,10652598,10652250,10651694,10650360,10649635,10649107,10648722,10648110,10647103,10646084,10645469,10645256,10644979,10644384,10643863,10642601,10641892,10641693,10641244,10640933,10639955	Gene ID= ENSG00000101384.11 TPM= 61.88 Transcript Type= protein_coding
chr20	11890723	11926609	11890723	11926609	+	ENST00000254977.7@BTBD3	ENST00000254977.7	protein_coding	11890723,11918334,11919086,11919718,11922634	11890954,11918601,11919176,11919836,11926609	Gene ID= ENSG00000132640.14 TPM= 15.18 Transcript Type= protein_coding
chr20	13008954	13166764	13008954	13166764	+	transcript824.chr20.nic@SPTLC3	transcript824.chr20.nic	protein_coding	13008954,13009201,13048945,13072256,13074349,13091083,13093484,13110112,13117506,13126591,13154003,13160003,13164754	13009072,13009384,13049130,13072410,13074497,13091207,13093577,13110217,13117725,13126717,13154138,13160132,13166764	Gene ID= ENSG00000172296.12 TPM= 3.5 Transcript Type= NA
chr20	13008994	13169103	13008994	13169103	+	ENST00000399002.6@SPTLC3	ENST00000399002.6	protein_coding	13008994,13048945,13072256,13074349,13091083,13093484,13110112,13117506,13126591,13154003,13160003,13164754	13009384,13049130,13072410,13074497,13091207,13093577,13110217,13117725,13126717,13154138,13160132,13169103	Gene ID= ENSG00000172296.12 TPM= 2.34 Transcript Type= protein_coding
chr20	13221271	13300651	13221271	13300651	+	transcript832.chr20.nnic@ISM1	transcript832.chr20.nnic	protein_coding	13221271,13270504,13288540,13292374,13298942	13221914,13270743,13288683,13292463,13300651	Gene ID= ENSG00000101230.5 TPM= 8.17 Transcript Type= NA
chr20	13389392	13638932	13389392	13638932	-	transcript834.chr20.nic@TASP1	transcript834.chr20.nic	protein_coding	13638894,13629934,13625185,13623446,13616857,13587250,13580897,13569507,13559008,13534022,13528446,13483227,13435044,13417448,13389392	13638932,13630152,13625252,13623514,13617123,13587370,13580981,13569586,13559114,13534141,13528511,13483337,13435154,13417521,13390452	Gene ID= ENSG00000089123.15 TPM= 2.34 Transcript Type= NA
chr20	13389392	13638900	13389392	13638900	-	transcript837.chr20.nnic@TASP1	transcript837.chr20.nnic	protein_coding	13638555,13629934,13625185,13623446,13587250,13580897,13569507,13559008,13534022,13528433,13483227,13435044,13417448,13389392	13638900,13630152,13625252,13623514,13587370,13580981,13569586,13559114,13534141,13528511,13483337,13435154,13417521,13390452	Gene ID= ENSG00000089123.15 TPM= 2.92 Transcript Type= NA
chr20	13389392	13638940	13389392	13638940	-	ENST00000337743.8@TASP1	ENST00000337743.8	protein_coding	13638894,13629934,13625185,13623446,13587250,13580897,13569507,13559008,13534022,13528433,13483227,13435044,13417448,13389392	13638940,13630152,13625252,13623514,13587370,13580981,13569586,13559114,13534141,13528511,13483337,13435154,13417521,13390452	Gene ID= ENSG00000089123.15 TPM= 6.42 Transcript Type= protein_coding
chr20	13714322	13784926	13714322	13784926	-	transcript841.chr20.nnic@ESF1	transcript841.chr20.nnic	protein_coding	13784880,13782504,13775873,13775157,13772515,13771331,13769907,13766777,13759692,13733721,13728378,13718908,13717368,13714322	13784926,13783183,13776270,13775270,13772615,13771483,13770021,13766924,13759853,13733842,13728465,13718984,13717514,13715167	Gene ID= ENSG00000089048.14 TPM= 21.02 Transcript Type= NA
chr20	13714322	13784877	13714322	13784877	-	transcript843.chr20.nic@ESF1	transcript843.chr20.nic	protein_coding	13782504,13775873,13775157,13772515,13771331,13769907,13766777,13759692,13733721,13728378,13718908,13717368,13714322	13784877,13776270,13775270,13772615,13771483,13770021,13766924,13759853,13733842,13728465,13718984,13717514,13715167	Gene ID= ENSG00000089048.14 TPM= 2.34 Transcript Type= NA
chr20	13771913	13784926	13771913	13784926	-	transcript846.chr20.nnic@ESF1	transcript846.chr20.nnic	protein_coding	13784880,13782504,13775873,13771913	13784926,13783183,13776270,13775270	Gene ID= ENSG00000089048.14 TPM= 2.34 Transcript Type= NA
chr20	14323999	14337649	14323999	14337649	-	transcript853.chr20.nnic@FLRT3	transcript853.chr20.nnic	protein_coding	14337404,14328580,14328064,14323999	14337649,14329327,14328200,14327558	Gene ID= ENSG00000125848.9 TPM= 4.67 Transcript Type= NA
chr20	14323999	14337649	14323999	14337649	-	transcript854.chr20.nnic@FLRT3	transcript854.chr20.nnic	protein_coding	14337404,14329134,14328064,14323999	14337649,14329327,14328200,14327558	Gene ID= ENSG00000125848.9 TPM= 7.01 Transcript Type= NA
chr20	14324132	14337649	14324132	14337649	-	transcript865.chr20.nnic@FLRT3	transcript865.chr20.nnic	protein_coding	14337404,14328580,14324132	14337649,14329327,14327558	Gene ID= ENSG00000125848.9 TPM= 2.34 Transcript Type= NA
chr20	14323995	14337616	14323995	14337616	-	ENST00000341420.4@FLRT3	ENST00000341420.4	protein_coding	14337404,14329134,14323995	14337616,14329327,14327558	Gene ID= ENSG00000125848.9 TPM= 23.35 Transcript Type= protein_coding
chr20	15234014	15239583	15234014	15239583	-	transcript877.chr20.nnic@NA	transcript877.chr20.nnic	NA	15234014	15239583	Gene ID= novel_gene_chr20_878 TPM= 12.84 Transcript Type= NA
chr20	15431405	15511285	15431405	15511285	+	transcript879.chr20.nnic@MACROD2	transcript879.chr20.nnic	protein_coding	15431405,15499774,15510604	15431435,15499847,15511285	Gene ID= ENSG00000172264.16 TPM= 2.34 Transcript Type= NA
chr20	15576554	15577495	15576554	15577495	-	transcript882.chr20.nnic@NA	transcript882.chr20.nnic	NA	15576554	15577495	Gene ID= novel_gene_chr20_883 TPM= 3.5 Transcript Type= NA
chr20	15589906	15591006	15589906	15591006	+	transcript884.chr20.nnic@NA	transcript884.chr20.nnic	NA	15589906	15591006	Gene ID= novel_gene_chr20_885 TPM= 2.34 Transcript Type= NA
chr20	15862743	16053197	15862743	16053197	+	ENST00000378058.7@MACROD2	ENST00000378058.7	protein_coding	15862743,15885764,15933276,15937476,15967553,15986727,15987066,16041201,16044571,16049830	15862826,15885811,15933338,15937544,15967630,15986801,15987158,16041278,16044639,16053197	Gene ID= ENSG00000172264.16 TPM= 41.83 Transcript Type= protein_coding
chr20	15862743	16053192	15862743	16053192	+	transcript888.chr20.nnic@MACROD2	transcript888.chr20.nnic	protein_coding	15862743,15885764,15933276,15937476,15967553,15986727,15987066,16041201,16044571,16049989	15862826,15885811,15933338,15937544,15967630,15986801,15987158,16041278,16044639,16053192	Gene ID= ENSG00000172264.16 TPM= 33.08 Transcript Type= NA
chr20	13995369	16053197	13995369	16053197	+	ENST00000217246.8@MACROD2	ENST00000217246.8	protein_coding	13995369,14002288,14085621,14493479,14684843,15229940,15431405,15499774,15862745,15885764,15933276,15937476,15967553,15986727,15987066,16041201,16049830	13995809,14002404,14085728,14493508,14684959,15230061,15431435,15499847,15862826,15885811,15933338,15937544,15967630,15986801,15987158,16041278,16053197	Gene ID= ENSG00000172264.16 TPM= 36 Transcript Type= protein_coding
chr20	15915044	15917838	15915044	15917838	+	transcript898.chr20.nnic@NA	transcript898.chr20.nnic	NA	15915044	15917838	Gene ID= novel_gene_chr20_899 TPM= 2.34 Transcript Type= NA
chr20	16379146	16573457	16379146	16573457	-	transcript910.chr20.nic@KIF16B	transcript910.chr20.nic	protein_coding	16573229,16528371,16526092,16515548,16512826,16511418,16507958,16506022,16505722,16504372,16497613,16494291,16429863,16428953,16427104,16406374,16404813,16381694,16379146	16573457,16528440,16526205,16515664,16512923,16511527,16508100,16506190,16505853,16504547,16497678,16494350,16429982,16429004,16427241,16406456,16404901,16381747,16380163	Gene ID= ENSG00000089177.18 TPM= 8.76 Transcript Type= NA
chr20	16272104	16573433	16272104	16573433	-	ENST00000354981.6@KIF16B	ENST00000354981.6	protein_coding	16573229,16528371,16526092,16515548,16512826,16511418,16507958,16506022,16505722,16504372,16497613,16494291,16429863,16428953,16427104,16406374,16404813,16381694,16378805,16374257,16371665,16370586,16356330,16335926,16312335,16272104	16573433,16528440,16526205,16515664,16512923,16511527,16508100,16506190,16505853,16504547,16497678,16494350,16429982,16429004,16427241,16406456,16404901,16381747,16380163,16374409,16371761,16370636,16356452,16336015,16312418,16273411	Gene ID= ENSG00000089177.18 TPM= 23.94 Transcript Type= protein_coding
chr20	16729961	16741776	16729961	16741776	+	ENST00000377943.9@SNRPB2	ENST00000377943.9	protein_coding	16729961,16731668,16732164,16737261,16738852,16740325,16740846	16730064,16731766,16732336,16737401,16738902,16740413,16741776	Gene ID= ENSG00000125870.10 TPM= 9.34 Transcript Type= protein_coding
chr20	16729984	16742563	16729984	16742563	+	ENST00000246071.7@SNRPB2	ENST00000246071.7	protein_coding	16729984,16731668,16732164,16737261,16738852,16740325,16740846	16730164,16731766,16732336,16737401,16738902,16740413,16742563	Gene ID= ENSG00000125870.10 TPM= 22.18 Transcript Type= protein_coding
chr20	17226991	17484578	17226991	17484578	+	ENST00000262545.6@PCSK2	ENST00000262545.6	protein_coding	17226991,17260240,17358327,17360532,17369240,17409263,17429435,17436708,17453742,17456348,17465326,17481584	17227482,17260344,17358440,17360640,17369277,17409339,17429523,17436883,17453957,17456448,17465553,17484578	Gene ID= ENSG00000125851.9 TPM= 25.69 Transcript Type= protein_coding
chr20	17493905	17558960	17493905	17558960	-	ENST00000377868.6@BFSP1	ENST00000377868.6	protein_coding	17558688,17524848,17514721,17511976,17508889,17498820,17496938,17493905	17558960,17524908,17514816,17512068,17508996,17499040,17497023,17495029	Gene ID= ENSG00000125864.13 TPM= 1.17 Transcript Type= protein_coding
chr20	17493905	17531369	17493905	17531369	-	ENST00000377873.7@BFSP1	ENST00000377873.7	protein_coding	17530953,17524848,17514721,17511976,17508889,17498820,17496938,17493905	17531369,17524908,17514816,17512068,17508996,17499040,17497023,17495029	Gene ID= ENSG00000125864.13 TPM= 4.67 Transcript Type= protein_coding
chr20	17570082	17608242	17570082	17608242	+	ENST00000474024.5@DSTN	ENST00000474024.5	protein_coding	17570082,17591932,17600738,17604555,17607037	17570211,17592063,17601045,17604631,17608242	Gene ID= ENSG00000125868.15 TPM= 31.53 Transcript Type= protein_coding
chr20	17570111	17573913	17570111	17573913	+	transcript950.chr20.nnic@NA	transcript950.chr20.nnic	NA	17570111	17573913	Gene ID= novel_gene_chr20_951 TPM= 5.84 Transcript Type= NA
chr20	17613678	17682434	17613678	17682434	-	transcript965.chr20.nic@RRBP1	transcript965.chr20.nic	protein_coding	17682028,17658596,17642979,17641797,17636577,17635546,17633460,17629823,17627504,17627348,17625512,17624576,17621855,17621690,17621458,17620715,17620299,17619633,17618596,17616732,17615926,17615431,17614737,17613678	17682434,17660528,17643127,17641919,17636729,17635664,17633613,17629961,17627682,17627382,17625602,17624668,17621947,17621773,17621547,17620807,17620370,17619728,17618679,17616839,17616009,17615529,17614880,17614220	Gene ID= ENSG00000125844.15 TPM= 85.2 Transcript Type= NA
chr20	17613678	17682233	17613678	17682233	-	ENST00000377813.5@RRBP1	ENST00000377813.5	protein_coding	17682028,17679999,17658596,17642979,17641797,17636577,17635546,17633460,17629823,17627504,17627348,17625512,17624576,17621855,17621690,17621458,17620715,17620299,17619633,17618596,17616732,17615926,17615431,17614737,17613678	17682233,17680075,17660528,17643127,17641919,17636729,17635664,17633613,17629961,17627682,17627382,17625602,17624668,17621947,17621773,17621547,17620807,17620370,17619728,17618679,17616839,17616009,17615529,17614880,17614220	Gene ID= ENSG00000125844.15 TPM= 68.27 Transcript Type= protein_coding
chr20	17613678	17682295	17613678	17682295	-	ENST00000360807.8@RRBP1	ENST00000360807.8	protein_coding	17682028,17659980,17658605,17642979,17641797,17636577,17635546,17633460,17629823,17627504,17627348,17625512,17624576,17621855,17621690,17621458,17620715,17620299,17619633,17618596,17616732,17615926,17615431,17614737,17613678	17682295,17660528,17658689,17643127,17641919,17636729,17635664,17633613,17629961,17627682,17627382,17625602,17624668,17621947,17621773,17621547,17620807,17620370,17619728,17618679,17616839,17616009,17615529,17614880,17614220	Gene ID= ENSG00000125844.15 TPM= 11.09 Transcript Type= protein_coding
chr20	17622299	17623942	17622299	17623942	+	transcript981.chr20.nnic@NA	transcript981.chr20.nnic	NA	17622299	17623942	Gene ID= novel_gene_chr20_982 TPM= 2.34 Transcript Type= NA
chr20	17941597	17968980	17941597	17968980	-	ENST00000377768.7@SNX5	ENST00000377768.7	protein_coding	17968700,17968375,17956933,17955365,17953996,17952587,17951500,17950291,17950132,17949064,17948890,17947486,17943110,17941597	17968980,17968457,17957037,17955475,17954117,17952710,17951595,17950396,17950207,17949103,17948976,17947645,17943195,17942407	Gene ID= ENSG00000089006.16 TPM= 38.53 Transcript Type= protein_coding
chr20	17966925	17968830	17966925	17968830	-	transcript994.chr20.nnic@NA	transcript994.chr20.nnic	NA	17966925	17968830	Gene ID= novel_gene_chr20_995 TPM= 3.5 Transcript Type= NA
chr20	17968913	17991122	17968913	17991122	+	ENST00000377710.9@MGME1	ENST00000377710.9	protein_coding	17968913,17969801,17975684,17988166,17989939	17969141,17970370,17975903,17988298,17991122	Gene ID= ENSG00000125871.13 TPM= 7.59 Transcript Type= protein_coding
chr20	17969057	17991122	17969057	17991122	+	transcript992.chr20.nic@MGME1	transcript992.chr20.nic	protein_coding	17969057,17975684,17988166,17989939	17970370,17975903,17988298,17991122	Gene ID= ENSG00000125871.13 TPM= 2.92 Transcript Type= NA
chr20	18024152	18057877	18024152	18057877	-	ENST00000278780.6@OVOL2	ENST00000278780.6	protein_coding	18057535,18056657,18041534,18024152	18057877,18056877,18041723,18024952	Gene ID= ENSG00000125850.10 TPM= 4.67 Transcript Type= protein_coding
chr20	18137849	18188387	18137849	18188387	+	transcript1003.chr20.nic@KAT14	transcript1003.chr20.nic	protein_coding	18137849,18142208,18145233,18150821,18159084,18161823,18162377,18181710,18183123,18184602,18187286	18138051,18142919,18145351,18150942,18159265,18162239,18162945,18181846,18183298,18184792,18188387	Gene ID= ENSG00000149474.13 TPM= 4.67 Transcript Type= NA
chr20	18137873	18143169	18137873	18143169	+	ENST00000432901.3@PET117	ENST00000432901.3	protein_coding	18137873,18142208	18138051,18143169	Gene ID= ENSG00000232838.3 TPM= 16.35 Transcript Type= protein_coding
chr20	18288283	18316994	18288283	18316994	+	ENST00000396026.7@ZNF133	ENST00000396026.7	protein_coding	18288283,18297985,18305008,18305681,18306298,18315072	18288604,18298062,18305178,18305807,18306393,18316994	Gene ID= ENSG00000125846.15 TPM= 2.34 Transcript Type= protein_coding
chr20	18288283	18316994	18288283	18316994	+	ENST00000622607.4@ZNF133	ENST00000622607.4	protein_coding	18288283,18289899,18305668,18306298,18315069	18288604,18290074,18305807,18306393,18316994	Gene ID= ENSG00000125846.15 TPM= 2.34 Transcript Type= protein_coding
chr20	18288529	18316996	18288529	18316996	+	transcript1023.chr20.nnic@ZNF133	transcript1023.chr20.nnic	protein_coding	18288529,18305681,18306298,18315069	18288604,18305807,18306393,18316996	Gene ID= ENSG00000125846.15 TPM= 3.5 Transcript Type= NA
chr20	18288511	18316991	18288511	18316991	+	ENST00000628216.2@ZNF133	ENST00000628216.2	protein_coding	18288511,18297985,18305681,18306298,18315069	18288604,18298062,18305807,18306393,18316991	Gene ID= ENSG00000125846.15 TPM= 2.34 Transcript Type= protein_coding
chr20	18383367	18466275	18383367	18466275	-	transcript1024.chr20.nnic@DZANK1	transcript1024.chr20.nnic	protein_coding	18465250,18460153,18455247,18453731,18452615,18448984,18433652,18427067,18415327,18414348,18412646,18398523,18396472,18394254,18393711,18390379,18389701,18385016,18383367	18466275,18460306,18455361,18453827,18452682,18449069,18433765,18427159,18415449,18414512,18412853,18398626,18396546,18394350,18393811,18390459,18389828,18385090,18384564	Gene ID= ENSG00000089091.16 TPM= 3.5 Transcript Type= NA
chr20	18467127	18484643	18467127	18484643	+	ENST00000377603.4@POLR3F	ENST00000377603.4	protein_coding	18467127,18468944,18472842,18473391,18475075,18480038,18480402,18481619,18483481	18467568,18469061,18472909,18473458,18475187,18480181,18480509,18481810,18484643	Gene ID= ENSG00000132664.11 TPM= 3.5 Transcript Type= protein_coding
chr20	18486540	18497243	18486540	18497243	-	ENST00000337227.8@RBBP9	ENST00000337227.8	protein_coding	18497069,18495838,18493958,18490395,18486540	18497243,18495880,18494063,18490480,18489990	Gene ID= ENSG00000089050.15 TPM= 5.84 Transcript Type= protein_coding
chr20	18507555	18561415	18507555	18561415	+	ENST00000336714.7@SEC23B	ENST00000336714.7	protein_coding	18507555,18510822,18512225,18515650,18524433,18524935,18525788,18526373,18527496,18530680,18532664,18535653,18542296,18543019,18545956,18548609,18551089,18554235,18555108,18560651	18507972,18511056,18512282,18515736,18524669,18525020,18525932,18526531,18527611,18530803,18532744,18535742,18542402,18543172,18546033,18548770,18551175,18554390,18555173,18561415	Gene ID= ENSG00000101310.14 TPM= 23.74 Transcript Type= protein_coding
chr20	18507579	18561415	18507579	18561415	+	ENST00000377475.7@SEC23B	ENST00000377475.7	protein_coding	18507579,18510822,18512225,18515650,18524433,18524935,18525788,18526373,18527496,18530680,18532664,18535653,18542296,18543019,18545956,18548609,18551089,18554235,18555108,18560651	18507990,18511056,18512282,18515736,18524669,18525020,18525932,18526531,18527611,18530803,18532744,18535742,18542402,18543172,18546033,18548770,18551175,18554390,18555173,18561415	Gene ID= ENSG00000101310.14 TPM= 10.89 Transcript Type= protein_coding
chr20	18567347	18569563	18567347	18569563	+	ENST00000435844.3@SMIM26	ENST00000435844.3	protein_coding	18567347,18569239	18567596,18569563	Gene ID= ENSG00000232388.4 TPM= 47.87 Transcript Type= protein_coding
chr20	18567420	18569563	18567420	18569563	+	ENST00000411646.1@SMIM26	ENST00000411646.1	protein_coding	18567420,18569236	18567596,18569563	Gene ID= ENSG00000232388.4 TPM= 12.84 Transcript Type= protein_coding
chr20	18587893	18763917	18587893	18763917	+	ENST00000377452.3@DTD1	ENST00000377452.3	protein_coding	18587893,18593731,18596006,18628127,18744100,18763360	18588115,18593821,18596241,18628233,18744271,18763917	Gene ID= ENSG00000125821.11 TPM= 15.18 Transcript Type= protein_coding
chr20	18587964	18632178	18587964	18632178	+	ENST00000494921.1@DTD1	ENST00000494921.1	protein_coding	18587964,18593731,18596006,18628127,18630381	18588115,18593821,18596241,18628233,18632178	Gene ID= ENSG00000125821.11 TPM= 1.17 Transcript Type= processed_transcript
chr20	19515486	19722899	19515486	19722899	+	transcript1065.chr20.nic@SLC24A3	transcript1065.chr20.nic	protein_coding	19515486,19580000,19584971,19585441,19654062,19665864,19673601,19681858,19684176,19685100,19693259,19696797,19698568,19717528,19720991	19515564,19580074,19585055,19585544,19654136,19665889,19673654,19681991,19684336,19685361,19693425,19696911,19698680,19717593,19722899	Gene ID= ENSG00000185052.11 TPM= 17.51 Transcript Type= NA
chr20	19758047	20002457	19758047	20002457	+	transcript1071.chr20.nnic@RIN2	transcript1071.chr20.nnic	protein_coding	19758047,19799622,19889566,19935099,19956615,19960700,19964952,19970838,19974654,19990006,19992168,19996679,20000613	19758327,19799747,19889658,19935199,19956807,19960811,19965024,19970929,19975787,19990311,19992299,19996842,20002457	Gene ID= ENSG00000132669.12 TPM= 35.61 Transcript Type= NA
chr20	19886521	20002457	19886521	20002457	+	ENST00000255006.10@RIN2	ENST00000255006.10	protein_coding	19886521,19889566,19935099,19956615,19960700,19964952,19970838,19974654,19990006,19992168,19996679,20000613	19886780,19889658,19935199,19956807,19960811,19965024,19970929,19975787,19990311,19992299,19996842,20002457	Gene ID= ENSG00000132669.12 TPM= 43.2 Transcript Type= protein_coding
chr20	19886506	19890703	19886506	19890703	+	transcript1084.chr20.nic@RIN2	transcript1084.chr20.nic	protein_coding	19886506,19889566	19886780,19890703	Gene ID= ENSG00000132669.12 TPM= 4.67 Transcript Type= NA
chr20	19998724	20001548	19998724	20001548	+	transcript1085.chr20.nnic@NA	transcript1085.chr20.nnic	NA	19998724	20001548	Gene ID= novel_gene_chr20_1086 TPM= 3.5 Transcript Type= NA
chr20	20017293	20033608	20017293	20033608	+	transcript1098.chr20.nnic@NAA20	transcript1098.chr20.nnic	protein_coding	20017293,20022456,20025677,20026784,20032508,20033102,20033520	20017449,20022480,20025767,20026919,20032653,20033190,20033608	Gene ID= ENSG00000173418.11 TPM= 2.34 Transcript Type= NA
chr20	20017116	20033629	20017116	20033629	+	ENST00000334982.8@NAA20	ENST00000334982.8	protein_coding	20017116,20022456,20025677,20026784,20032508,20033102	20017449,20022480,20025767,20026919,20032653,20033629	Gene ID= ENSG00000173418.11 TPM= 81.73 Transcript Type= protein_coding
chr20	20604673	20712668	20604673	20712668	-	transcript1102.chr20.nic@RALGAPA2	transcript1102.chr20.nic	protein_coding	20712375,20680691,20676236,20653530,20643506,20640701,20639785,20637363,20635418,20629363,20620463,20619277,20616043,20611315,20604673	20712668,20680801,20676288,20653587,20643549,20640878,20639900,20637501,20635617,20629590,20620630,20619414,20616191,20611426,20605412	Gene ID= ENSG00000188559.13 TPM= 3.5 Transcript Type= NA
chr20	20389552	20639900	20389552	20639900	-	ENST00000430436.5@RALGAPA2	ENST00000430436.5	protein_coding	20639785,20637363,20635418,20629363,20620463,20619277,20616043,20611315,20605175,20601682,20591177,20589268,20584865,20583050,20572875,20571848,20571458,20546704,20536656,20535745,20531687,20526252,20524830,20524406,20520917,20512513,20511254,20505411,20503351,20495117,20472829,20412027,20389552	20639900,20637501,20635617,20629590,20620630,20619414,20616191,20611426,20605412,20601846,20591314,20589365,20584955,20583226,20573068,20571946,20571613,20546832,20536784,20535803,20531795,20526362,20524898,20524543,20521100,20513284,20511325,20505534,20503506,20495275,20472956,20412148,20393253	Gene ID= ENSG00000188559.13 TPM= 40.87 Transcript Type= protein_coding
chr20	21126054	21246622	21126054	21246622	+	ENST00000619189.4@KIZ	ENST00000619189.4	protein_coding	21126054,21132097,21136390,21145565,21161871,21162850,21205491,21214535,21215583,21229011,21232734,21244245,21246479	21126204,21132159,21136552,21145654,21162507,21163159,21205584,21214700,21215648,21229115,21232830,21244288,21246622	Gene ID= ENSG00000088970.15 TPM= 9.34 Transcript Type= protein_coding
chr20	21302731	21303704	21302731	21303704	-	ENST00000622628.1@AL117332.1	ENST00000622628.1	antisense_RNA	21302731	21303704	Gene ID= ENSG00000275457.1 TPM= 4.67 Transcript Type= antisense_RNA
chr20	21303304	21389827	21303304	21389827	+	ENST00000377191.4@XRN2	ENST00000377191.4	protein_coding	21303304,21326279,21326490,21328559,21330481,21330616,21331561,21331768,21332283,21333544,21333704,21333937,21334078,21339044,21340721,21344090,21346415,21348146,21348341,21349389,21354789,21356080,21356586,21357736,21365421,21365573,21368463,21381994,21386868,21389273	21303473,21326406,21326601,21328670,21330539,21330705,21331633,21331818,21332440,21333618,21333837,21333994,21334185,21339088,21340852,21344208,21346550,21348253,21348430,21349461,21354872,21356177,21356665,21357792,21365489,21365704,21368590,21382057,21387006,21389827	Gene ID= ENSG00000088930.7 TPM= 194.99 Transcript Type= protein_coding
chr20	22581005	22584463	22581005	22584463	-	ENST00000419308.6@FOXA2	ENST00000419308.6	protein_coding	22584192,22581005	22584463,22583154	Gene ID= ENSG00000125798.14 TPM= 10.51 Transcript Type= protein_coding
chr20	23045633	23049741	23045633	23049741	-	ENST00000377103.2@THBD	ENST00000377103.2	protein_coding	23045633	23049741	Gene ID= ENSG00000178726.6 TPM= 57.21 Transcript Type= protein_coding
chr20	23079349	23086340	23079349	23086340	-	ENST00000246006.4@CD93	ENST00000246006.4	protein_coding	23084259,23079349	23086340,23083974	Gene ID= ENSG00000125810.9 TPM= 225.35 Transcript Type= protein_coding
chr20	23350736	23354777	23350736	23354777	+	ENST00000254998.2@NXT1	ENST00000254998.2	protein_coding	23350736,23353981	23351061,23354777	Gene ID= ENSG00000132661.3 TPM= 43.2 Transcript Type= protein_coding
chr20	23362158	23372261	23362158	23372261	+	transcript1176.chr20.nnic@GZF1	transcript1176.chr20.nnic	protein_coding	23362158,23364363,23367003,23368762,23369584,23370137	23362237,23365747,23367097,23368929,23369741,23372261	Gene ID= ENSG00000125812.15 TPM= 2.34 Transcript Type= NA
chr20	23362182	23373063	23362182	23373063	+	ENST00000338121.9@GZF1	ENST00000338121.9	protein_coding	23362182,23364363,23367003,23368762,23369584,23370091	23362237,23365747,23367097,23368929,23369741,23373063	Gene ID= ENSG00000125812.15 TPM= 1.17 Transcript Type= protein_coding
chr20	23374522	23421507	23374522	23421507	-	transcript1162.chr20.nnic@NAPB	transcript1162.chr20.nnic	protein_coding	23421305,23402993,23397072,23395139,23394922,23390209,23389946,23381213,23379867,23379445,23374522	23421507,23403072,23397188,23395262,23394999,23390264,23390030,23381317,23379935,23379495,23377486	Gene ID= ENSG00000125814.17 TPM= 6.07 Transcript Type= NA
chr20	23374522	23421507	23374522	23421507	-	transcript1163.chr20.nnic@NAPB	transcript1163.chr20.nnic	protein_coding	23421305,23402993,23397072,23395139,23394922,23390209,23389946,23381213,23379867,23379445,23374522	23421507,23403072,23397188,23395467,23394999,23390264,23390030,23381317,23379935,23379495,23377486	Gene ID= ENSG00000125814.17 TPM= 2.57 Transcript Type= NA
chr20	23374519	23421519	23374519	23421519	-	ENST00000398425.7@NAPB	ENST00000398425.7	protein_coding	23421305,23402993,23397072,23394922,23390209,23389946,23381213,23379867,23379445,23374519	23421519,23403072,23397188,23394999,23390264,23390030,23381317,23379935,23379495,23377486	Gene ID= ENSG00000125814.17 TPM= 6.07 Transcript Type= protein_coding
chr20	23374522	23421507	23374522	23421507	-	transcript1169.chr20.nic@NAPB	transcript1169.chr20.nic	protein_coding	23421305,23402993,23394922,23390209,23389946,23381213,23379867,23379445,23374522	23421507,23403072,23394999,23390264,23390030,23381317,23379935,23379495,23377486	Gene ID= ENSG00000125814.17 TPM= 4.9 Transcript Type= NA
chr20	23374522	23421488	23374522	23421488	-	ENST00000377026.4@NAPB	ENST00000377026.4	protein_coding	23421305,23402993,23397072,23395139,23394922,23390209,23389946,23381213,23379867,23379445,23374522	23421488,23403072,23397188,23395185,23394999,23390264,23390030,23381317,23379935,23379495,23377486	Gene ID= ENSG00000125814.17 TPM= 9.57 Transcript Type= protein_coding
chr20	23626706	23637945	23626706	23637945	-	ENST00000398411.5@CST3	ENST00000398411.5	protein_coding	23637620,23635254,23633914,23626706	23637945,23635367,23633999,23629465	Gene ID= ENSG00000101439.8 TPM= 4.67 Transcript Type= protein_coding
chr20	23633648	23638026	23633648	23638026	-	ENST00000376925.7@CST3	ENST00000376925.7	protein_coding	23637620,23635254,23633648	23638026,23635367,23633999	Gene ID= ENSG00000101439.8 TPM= 796.3 Transcript Type= protein_coding
chr20	23985053	23986875	23985053	23986875	-	ENST00000278765.8@GGTLC1	ENST00000278765.8	protein_coding	23986777,23986436,23986076,23985862,23985667,23985053	23986875,23986645,23986203,23985974,23985780,23985362	Gene ID= ENSG00000149435.12 TPM= 22.38 Transcript Type= protein_coding
chr20	23985050	23986795	23985050	23986795	-	ENST00000286890.8@GGTLC1	ENST00000286890.8	protein_coding	23986436,23986076,23985862,23985667,23985050	23986795,23986203,23985974,23985780,23985362	Gene ID= ENSG00000149435.12 TPM= 149.07 Transcript Type= protein_coding
chr20	23985053	23988779	23985053	23988779	-	ENST00000335694.4@GGTLC1	ENST00000335694.4	protein_coding	23988609,23986436,23986076,23985862,23985667,23985053	23988779,23986645,23986203,23985974,23985780,23985362	Gene ID= ENSG00000149435.12 TPM= 15.38 Transcript Type= protein_coding
chr20	24469199	24666616	24469199	24666616	+	ENST00000376862.3@SYNDIG1	ENST00000376862.3	protein_coding	24469199,24543020,24584856,24665346	24469753,24543577,24584993,24666616	Gene ID= ENSG00000101463.5 TPM= 1.17 Transcript Type= protein_coding
chr20	24949230	24959928	24949230	24959928	+	ENST00000480798.1@CST7	ENST00000480798.1	protein_coding	24949230,24957287,24958928,24959635	24949575,24957459,24959044,24959928	Gene ID= ENSG00000077984.5 TPM= 12.84 Transcript Type= protein_coding
chr20	24962925	24992979	24962925	24992979	-	ENST00000217456.2@APMAP	ENST00000217456.2	protein_coding	24992594,24983903,24978767,24973645,24971460,24970197,24969526,24968892,24962925	24992979,24984019,24978882,24973737,24971576,24970371,24969660,24969084,24964022	Gene ID= ENSG00000101474.11 TPM= 244.03 Transcript Type= protein_coding
chr20	24962946	24992797	24962946	24992797	-	transcript1226.chr20.nnic@APMAP	transcript1226.chr20.nnic	protein_coding	24992594,24983903,24978767,24973645,24971460,24970197,24969526,24962946	24992797,24984019,24978882,24973737,24971576,24970371,24969660,24964022	Gene ID= ENSG00000101474.11 TPM= 10.51 Transcript Type= NA
chr20	25006232	25058174	25006232	25058174	-	transcript1218.chr20.nic@ACSS1	transcript1218.chr20.nic	protein_coding	25057769,25048085,25030759,25023466,25022940,25021389,25020010,25015138,25013961,25013536,25012601,25009270,25006232	25058174,25048181,25030958,25023641,25023092,25021536,25020147,25015230,25014073,25013662,25012939,25009388,25007941	Gene ID= ENSG00000154930.14 TPM= 8.41 Transcript Type= NA
chr20	25006232	25058188	25006232	25058188	-	transcript1222.chr20.nnic@ACSS1	transcript1222.chr20.nnic	protein_coding	25057769,25048085,25030759,25015138,25013961,25013536,25012812,25012601,25009270,25006232	25058188,25048181,25030958,25015230,25014073,25013662,25012939,25012664,25009388,25007941	Gene ID= ENSG00000154930.14 TPM= 10.74 Transcript Type= NA
chr20	25006232	25058182	25006232	25058182	-	ENST00000323482.8@ACSS1	ENST00000323482.8	protein_coding	25057769,25048085,25030759,25023466,25022940,25021389,25020010,25015138,25013961,25013536,25012812,25012601,25009270,25006232	25058182,25048181,25030958,25023641,25023092,25021536,25020147,25015230,25014073,25013662,25012939,25012664,25009388,25007941	Gene ID= ENSG00000154930.14 TPM= 115.24 Transcript Type= protein_coding
chr20	25195693	25226729	25195693	25226729	+	transcript1239.chr20.nic@ENTPD6	transcript1239.chr20.nic	protein_coding	25195693,25206522,25207076,25209849,25213263,25214867,25215676,25216648,25217502,25218550,25221232,25222838,25224101,25225162,25225499	25195867,25206590,25207397,25209925,25213406,25214942,25215711,25216736,25217581,25218614,25221333,25222978,25224157,25225317,25226729	Gene ID= ENSG00000197586.12 TPM= 7.71 Transcript Type= NA
chr20	25195685	25226729	25195685	25226729	+	transcript1252.chr20.nic@ENTPD6	transcript1252.chr20.nic	protein_coding	25195685,25207076,25209849,25213263,25214867,25215676,25216648,25217502,25218550,25221232,25222838,25224101,25225162,25225499	25195867,25207397,25209925,25213406,25214942,25215711,25216736,25217581,25218614,25221333,25222978,25224157,25225317,25226729	Gene ID= ENSG00000197586.12 TPM= 11.21 Transcript Type= NA
chr20	25195693	25226729	25195693	25226729	+	transcript1256.chr20.nic@ENTPD6	transcript1256.chr20.nic	protein_coding	25195693,25206522,25207076,25209849,25213263,25214867,25215676,25216648,25217502,25218550,25221232,25224101,25225205,25225499	25195867,25206590,25207397,25209925,25213406,25214942,25215711,25216736,25217581,25218614,25222978,25224157,25225317,25226729	Gene ID= ENSG00000197586.12 TPM= 13.63 Transcript Type= NA
chr20	25195685	25226729	25195685	25226729	+	transcript1267.chr20.nic@ENTPD6	transcript1267.chr20.nic	protein_coding	25195685,25207076,25209849,25213263,25214867,25215676,25216648,25217502,25218550,25221232,25224101,25225205,25225499	25195867,25207397,25209925,25213406,25214942,25215711,25216736,25217581,25218614,25222978,25224157,25225317,25226729	Gene ID= ENSG00000197586.12 TPM= 18.3 Transcript Type= NA
chr20	25195685	25226729	25195685	25226729	+	transcript1269.chr20.nic@ENTPD6	transcript1269.chr20.nic	protein_coding	25195685,25207076,25209849,25213263,25214867,25215676,25216648,25217502,25218550,25222838,25224101,25225205,25225499	25195867,25207397,25209925,25213406,25214942,25215711,25216736,25217581,25218614,25222978,25224157,25225317,25226729	Gene ID= ENSG00000197586.12 TPM= 7.05 Transcript Type= NA
chr20	25195694	25226729	25195694	25226729	+	transcript1279.chr20.nic@ENTPD6	transcript1279.chr20.nic	protein_coding	25195694,25209849,25213263,25214867,25215676,25216648,25217502,25218550,25221232,25224101,25225205,25225499	25195867,25209925,25213406,25214942,25215711,25216736,25217581,25218614,25222978,25224157,25225317,25226729	Gene ID= ENSG00000197586.12 TPM= 13.04 Transcript Type= NA
chr20	25195693	25226729	25195693	25226729	+	ENST00000354989.9@ENTPD6	ENST00000354989.9	protein_coding	25195693,25207076,25209849,25213263,25214867,25215676,25216648,25217502,25218550,25221232,25222838,25224101,25225205,25225499	25195867,25207397,25209925,25213406,25214942,25215711,25216736,25217581,25218614,25221333,25222978,25224157,25225317,25226729	Gene ID= ENSG00000197586.12 TPM= 39.57 Transcript Type= protein_coding
chr20	25195701	25226729	25195701	25226729	+	ENST00000360031.6@ENTPD6	ENST00000360031.6	protein_coding	25195701,25206522,25207079,25209849,25213263,25214867,25215676,25216648,25217502,25218550,25221232,25222838,25224101,25225205,25225499	25195867,25206590,25207397,25209925,25213406,25214942,25215711,25216736,25217581,25218614,25221333,25222978,25224157,25225317,25226729	Gene ID= ENSG00000197586.12 TPM= 22.06 Transcript Type= protein_coding
chr20	25195720	25226729	25195720	25226729	+	ENST00000376652.8@ENTPD6	ENST00000376652.8	protein_coding	25195720,25206522,25207076,25209849,25213263,25214867,25215676,25216648,25217502,25218550,25221232,25222838,25224101,25225205,25225499	25195867,25206590,25207397,25209925,25213406,25214942,25215711,25216736,25217581,25218614,25221333,25222978,25224157,25225317,25226729	Gene ID= ENSG00000197586.12 TPM= 19.72 Transcript Type= protein_coding
chr20	25195757	25226729	25195757	25226729	+	ENST00000433259.6@ENTPD6	ENST00000433259.6	protein_coding	25195757,25206522,25207076,25209849,25213263,25214867,25215676,25216648,25217502,25218550,25222838,25224101,25225162,25225499	25195867,25206590,25207397,25209925,25213406,25214942,25215711,25216736,25217581,25218614,25222978,25224157,25225317,25226729	Gene ID= ENSG00000197586.12 TPM= 3.53 Transcript Type= protein_coding
chr20	25248069	25298014	25248069	25298014	+	ENST00000216962.8@PYGB	ENST00000216962.8	protein_coding	25248069,25259237,25269129,25271383,25274592,25276646,25277244,25278319,25279057,25280266,25280949,25282033,25283176,25284104,25288425,25290481,25292406,25294158,25295604,25296370	25248421,25259338,25269207,25271486,25274723,25276757,25277326,25278462,25279149,25280412,25281112,25282147,25283277,25284251,25288483,25290622,25292613,25294292,25295670,25298014	Gene ID= ENSG00000100994.11 TPM= 234.69 Transcript Type= protein_coding
chr20	25300214	25390835	25300214	25390835	-	transcript1302.chr20.nnic@ABHD12	transcript1302.chr20.nnic	protein_coding	25390513,25339227,25323325,25320199,25317048,25314925,25309446,25308457,25307966,25306833,25303550,25302219,25301332,25300214	25390835,25339351,25323430,25320318,25317078,25314970,25309575,25308494,25308045,25306915,25303628,25302346,25301378,25300884	Gene ID= ENSG00000100997.18 TPM= 12.38 Transcript Type= NA
chr20	25294743	25390983	25294743	25390983	-	ENST00000376542.7@ABHD12	ENST00000376542.7	protein_coding	25390513,25339227,25323325,25320199,25317048,25314925,25309446,25308457,25307966,25306833,25303550,25302219,25294743	25390983,25339351,25323430,25320318,25317078,25314970,25309575,25308494,25308045,25306915,25303628,25302346,25295030	Gene ID= ENSG00000100997.18 TPM= 39.7 Transcript Type= protein_coding
chr20	25300198	25390976	25300198	25390976	-	ENST00000339157.9@ABHD12	ENST00000339157.9	protein_coding	25390513,25339227,25323325,25320199,25317048,25314925,25309446,25308457,25307966,25306833,25303550,25302219,25300198	25390976,25339351,25323430,25320318,25317078,25314970,25309575,25308494,25308045,25306915,25303628,25302346,25300884	Gene ID= ENSG00000100997.18 TPM= 159.4 Transcript Type= protein_coding
chr20	25300198	25390916	25300198	25390916	-	transcript1307.chr20.nnic@ABHD12	transcript1307.chr20.nnic	protein_coding	25390513,25339227,25323325,25317048,25314925,25309446,25308457,25307966,25306833,25303550,25302219,25300198	25390916,25339351,25323430,25317078,25314970,25309575,25308494,25308045,25306915,25303628,25302346,25300884	Gene ID= ENSG00000100997.18 TPM= 12.28 Transcript Type= NA
chr20	25300216	25390817	25300216	25390817	-	transcript1311.chr20.nic@ABHD12	transcript1311.chr20.nic	protein_coding	25390513,25339227,25323325,25320199,25317048,25314925,25309446,25308457,25307966,25306833,25303550,25300216	25390817,25339351,25323430,25320318,25317078,25314970,25309575,25308494,25308045,25306915,25303628,25302346	Gene ID= ENSG00000100997.18 TPM= 11.68 Transcript Type= NA
chr20	25407727	25448555	25407727	25448555	+	ENST00000262460.4@GINS1	ENST00000262460.4	protein_coding	25407727,25413790,25417104,25418105,25425211,25441702,25445923	25407895,25413854,25417202,25418195,25425327,25441776,25448555	Gene ID= ENSG00000101003.9 TPM= 2.34 Transcript Type= protein_coding
chr20	25477955	25585591	25477955	25585591	-	transcript1330.chr20.nic@NINL	transcript1330.chr20.nic	protein_coding	25585455,25526408,25517753,25512834,25510674,25504888,25503952,25500840,25498210,25496663,25491351,25489875,25489244,25481968,25480161,25477955	25585591,25526598,25517849,25513006,25510740,25505078,25504104,25501010,25498346,25496803,25491525,25489985,25489324,25482100,25480267,25479206	Gene ID= ENSG00000101004.14 TPM= 2.34 Transcript Type= NA
chr20	25452705	25585517	25452705	25585517	-	ENST00000278886.10@NINL	ENST00000278886.10	protein_coding	25585455,25526408,25517753,25512834,25510674,25504888,25503952,25500840,25498210,25496663,25491351,25489875,25489244,25481968,25480161,25478923,25476043,25469991,25467389,25462383,25461522,25458383,25455673,25452705	25585517,25526598,25517849,25513006,25510740,25505078,25504104,25501010,25498346,25496803,25491525,25489985,25489324,25482100,25480267,25479206,25477089,25470095,25467458,25462541,25461635,25458529,25455786,25453642	Gene ID= ENSG00000101004.14 TPM= 10.51 Transcript Type= protein_coding
chr20	25612935	25624175	25612935	25624175	-	ENST00000304788.3@NANP	ENST00000304788.3	protein_coding	25623859,25612935	25624175,25616581	Gene ID= ENSG00000170191.4 TPM= 1.17 Transcript Type= protein_coding
chr20	25674215	25696865	25674215	25696865	-	transcript1347.chr20.nnic@ZNF337	transcript1347.chr20.nnic	protein_coding	25696759,25686391,25685996,25674215	25696865,25686466,25686122,25677037	Gene ID= ENSG00000130684.13 TPM= 4.67 Transcript Type= NA
chr20	25674215	25696841	25674215	25696841	-	ENST00000252979.5@ZNF337	ENST00000252979.5	protein_coding	25696759,25686391,25685996,25685567,25674215	25696841,25686466,25686122,25685662,25677037	Gene ID= ENSG00000130684.13 TPM= 21.02 Transcript Type= protein_coding
chr20	26009808	26023272	26009808	26023272	+	transcript1355.chr20.nnic@AL450124.1	transcript1355.chr20.nnic	unprocessed_pseudogene	26009808,26019076,26019829,26020877	26009889,26019202,26019924,26023272	Gene ID= ENSG00000204556.4 TPM= 4.67 Transcript Type= NA
chr20	26009808	26053303	26009808	26053303	+	transcript1356.chr20.nnic@AL450124.1	transcript1356.chr20.nnic	unprocessed_pseudogene	26009808,26019076,26019829,26050718	26009889,26019202,26019924,26053303	Gene ID= ENSG00000204556.4 TPM= 2.34 Transcript Type= NA
chr20	26250748	26254389	26250748	26254389	-	transcript1364.chr20.nnic@NA	transcript1364.chr20.nnic	NA	26250748	26254389	Gene ID= novel_gene_chr20_1365 TPM= 4.67 Transcript Type= NA
chr20	28580634	28602770	28580634	28602770	-	transcript1367.chr20.nnic@FRG1CP	transcript1367.chr20.nnic	unprocessed_pseudogene	28602609,28601657,28600591,28600392,28591394,28590557,28588643,28586299,28583019,28581919,28580634	28602770,28601756,28600719,28600461,28591519,28590614,28588757,28586403,28583110,28582029,28580744	Gene ID= ENSG00000282826.1 TPM= 2.34 Transcript Type= NA
chr20	28583028	28602770	28583028	28602770	-	transcript1371.chr20.nnic@FRG1CP	transcript1371.chr20.nnic	unprocessed_pseudogene	28602609,28601657,28600392,28591394,28590557,28588643,28586299,28583870,28583028	28602770,28601756,28600461,28591519,28590614,28588757,28586403,28583946,28583110	Gene ID= ENSG00000282826.1 TPM= 2.34 Transcript Type= NA
chr20	28580633	28602770	28580633	28602770	-	transcript1373.chr20.nnic@FRG1CP	transcript1373.chr20.nnic	unprocessed_pseudogene	28602609,28601657,28600392,28591394,28590557,28588643,28586299,28580633	28602770,28601756,28600461,28591519,28590614,28588757,28586403,28583110	Gene ID= ENSG00000282826.1 TPM= 5.84 Transcript Type= NA
chr20	28583028	28602747	28583028	28602747	-	transcript1374.chr20.nnic@FRG1CP	transcript1374.chr20.nnic	unprocessed_pseudogene	28602609,28600392,28591394,28590557,28588643,28586299,28583870,28583028	28602747,28600461,28591519,28590614,28588757,28586403,28583946,28583110	Gene ID= ENSG00000282826.1 TPM= 2.34 Transcript Type= NA
chr20	28580633	28602817	28580633	28602817	-	transcript1375.chr20.nic@FRG1CP	transcript1375.chr20.nic	unprocessed_pseudogene	28602609,28600392,28591394,28590557,28588643,28586299,28580633	28602817,28600461,28591519,28590614,28588757,28586403,28583110	Gene ID= ENSG00000282826.1 TPM= 3.5 Transcript Type= NA
chr20	29452638	29497348	29452638	29497348	-	transcript1380.chr20.nnic@FRG1EP	transcript1380.chr20.nnic	unprocessed_pseudogene	29496813,29494886,29490847,29485740,29482454,29481358,29459630,29456645,29452638	29497348,29494955,29490972,29485841,29482545,29481468,29459759,29456665,29455139	Gene ID= ENSG00000282995.1 TPM= 2.34 Transcript Type= NA
chr20	29457122	29497197	29457122	29497197	-	transcript1385.chr20.nnic@FRG1EP	transcript1385.chr20.nnic	unprocessed_pseudogene	29496813,29494886,29490847,29485740,29482454,29481358,29457122	29497197,29494955,29490972,29485841,29482545,29481468,29459759	Gene ID= ENSG00000282995.1 TPM= 3.5 Transcript Type= NA
chr20	29457122	29497320	29457122	29497320	-	transcript1386.chr20.nnic@FRG1EP	transcript1386.chr20.nnic	unprocessed_pseudogene	29497118,29494886,29490847,29485740,29482454,29481358,29457122	29497320,29494955,29490972,29485841,29482545,29481468,29459759	Gene ID= ENSG00000282995.1 TPM= 4.09 Transcript Type= NA
chr20	29477577	29497348	29477577	29497348	-	transcript1395.chr20.nnic@FRG1EP	transcript1395.chr20.nnic	unprocessed_pseudogene	29496813,29494886,29490847,29485740,29482454,29481358,29477577	29497348,29494955,29490972,29485841,29482545,29481468,29478690	Gene ID= ENSG00000282995.1 TPM= 3.5 Transcript Type= NA
chr20	29477577	29497316	29477577	29497316	-	transcript1396.chr20.nnic@FRG1EP	transcript1396.chr20.nnic	unprocessed_pseudogene	29497118,29494886,29490847,29485740,29482454,29481358,29477577	29497316,29494955,29490972,29485841,29482545,29481468,29478690	Gene ID= ENSG00000282995.1 TPM= 2.34 Transcript Type= NA
chr20	29480072	29497348	29480072	29497348	-	transcript1401.chr20.nnic@FRG1EP	transcript1401.chr20.nnic	unprocessed_pseudogene	29496813,29494886,29490847,29485740,29482454,29480072	29497348,29494955,29490972,29485841,29482545,29481468	Gene ID= ENSG00000282995.1 TPM= 7.01 Transcript Type= NA
chr20	29480072	29497261	29480072	29497261	-	transcript1402.chr20.nnic@FRG1EP	transcript1402.chr20.nnic	unprocessed_pseudogene	29497118,29494886,29490847,29485740,29482454,29480072	29497261,29494955,29490972,29485841,29482545,29481468	Gene ID= ENSG00000282995.1 TPM= 4.67 Transcript Type= NA
chr20	30377044	30406570	30377044	30406570	+	transcript1405.chr20.nnic@FRG1BP	transcript1405.chr20.nnic	unprocessed_pseudogene	30377044,30379585,30388453,30391197,30393551,30396862,30397935,30404268	30377721,30379651,30388578,30391308,30393655,30396953,30398045,30406570	Gene ID= ENSG00000149531.15 TPM= 35.61 Transcript Type= NA
chr20	30377168	30406570	30377168	30406570	+	transcript1406.chr20.nnic@FRG1BP	transcript1406.chr20.nnic	unprocessed_pseudogene	30377168,30379585,30388453,30391197,30393551,30396862,30397935,30404268	30377425,30379651,30388578,30391308,30393655,30396953,30398045,30406570	Gene ID= ENSG00000149531.15 TPM= 37.95 Transcript Type= NA
chr20	30377215	30399332	30377215	30399332	+	transcript1408.chr20.nnic@FRG1BP	transcript1408.chr20.nnic	unprocessed_pseudogene	30377215,30379585,30388453,30393551,30396862,30397935,30399222	30377721,30379651,30388578,30393655,30396953,30398045,30399332	Gene ID= ENSG00000149531.15 TPM= 4.67 Transcript Type= NA
chr20	30377235	30399332	30377235	30399332	+	transcript1410.chr20.nnic@FRG1BP	transcript1410.chr20.nnic	unprocessed_pseudogene	30377235,30379585,30388453,30393551,30396862,30397935,30399222	30377425,30379651,30388578,30393655,30396953,30398045,30399332	Gene ID= ENSG00000149531.15 TPM= 4.67 Transcript Type= NA
chr20	31475293	31484905	31475293	31484905	+	ENST00000201979.2@REM1	ENST00000201979.2	protein_coding	31475293,31476227,31477828,31482287,31484159	31475366,31476785,31477910,31482488,31484905	Gene ID= ENSG00000088320.3 TPM= 9.34 Transcript Type= protein_coding
chr20	31514422	31569567	31514422	31569567	+	transcript1425.chr20.nic@HM13	transcript1425.chr20.nic	protein_coding	31514422,31527484,31538179,31544947,31549029,31549207,31550064,31559611,31561634,31566210,31569120	31514734,31527582,31538261,31545035,31549114,31549332,31550121,31559647,31561736,31566295,31569567	Gene ID= ENSG00000101294.16 TPM= 12.47 Transcript Type= NA
chr20	31514428	31569567	31514428	31569567	+	ENST00000340852.9@HM13	ENST00000340852.9	protein_coding	31514428,31527484,31538179,31544947,31549029,31549207,31550064,31554746,31559611,31561634,31566210,31569120	31514734,31527582,31538261,31545035,31549114,31549332,31550121,31554829,31559647,31561736,31566295,31569567	Gene ID= ENSG00000101294.16 TPM= 359.83 Transcript Type= protein_coding
chr20	31514428	31569567	31514428	31569567	+	ENST00000335574.9@HM13	ENST00000335574.9	protein_coding	31514428,31527484,31538179,31544947,31549029,31549207,31550064,31554746,31559611,31561634,31566210,31568078,31569120	31514734,31527582,31538261,31545035,31549114,31549332,31550121,31554829,31559647,31561736,31566295,31568280,31569567	Gene ID= ENSG00000101294.16 TPM= 10.92 Transcript Type= protein_coding
chr20	31514457	31541733	31514457	31541733	+	ENST00000498035.5@HM13	ENST00000498035.5	protein_coding	31514457,31527484,31538179	31514734,31527582,31541733	Gene ID= ENSG00000101294.16 TPM= 5.84 Transcript Type= protein_coding
chr20	31605283	31606515	31605283	31606515	+	ENST00000376105.4@ID1	ENST00000376105.4	protein_coding	31605283	31606515	Gene ID= ENSG00000125968.8 TPM= 53.13 Transcript Type= protein_coding
chr20	31605283	31606515	31605283	31606515	+	ENST00000376112.3@ID1	ENST00000376112.3	protein_coding	31605283,31606053	31605813,31606515	Gene ID= ENSG00000125968.8 TPM= 183.9 Transcript Type= protein_coding
chr20	31637888	31645006	31637888	31645006	+	ENST00000376075.3@COX4I2	ENST00000376075.3	protein_coding	31637888,31639018,31639933,31643404,31644768	31637962,31639099,31640097,31643535,31645006	Gene ID= ENSG00000131055.4 TPM= 8.17 Transcript Type= protein_coding
chr20	31637899	31645006	31637899	31645006	+	transcript1454.chr20.nnic@COX4I2	transcript1454.chr20.nnic	protein_coding	31637899,31639933,31643404,31644768	31637962,31640097,31643535,31645006	Gene ID= ENSG00000131055.4 TPM= 2.34 Transcript Type= NA
chr20	31639560	31641998	31639560	31641998	-	transcript1456.chr20.nnic@NA	transcript1456.chr20.nnic	NA	31639560	31641998	Gene ID= novel_gene_chr20_1457 TPM= 2.34 Transcript Type= NA
chr20	31651149	31652381	31651149	31652381	-	transcript1458.chr20.nnic@NA	transcript1458.chr20.nnic	NA	31651149	31652381	Gene ID= novel_gene_chr20_1459 TPM= 2.34 Transcript Type= NA
chr20	31664452	31722566	31664452	31722566	-	transcript1464.chr20.nnic@BCL2L1	transcript1464.chr20.nnic	protein_coding	31722417,31721655,31664452	31722566,31722330,31666086	Gene ID= ENSG00000171552.12 TPM= 16.74 Transcript Type= NA
chr20	31664452	31723544	31664452	31723544	-	transcript1465.chr20.nic@BCL2L1	transcript1465.chr20.nic	protein_coding	31722618,31721655,31664452	31723544,31722330,31666086	Gene ID= ENSG00000171552.12 TPM= 69.29 Transcript Type= NA
chr20	31664452	31722597	31664452	31722597	-	ENST00000376062.6@BCL2L1	ENST00000376062.6	protein_coding	31721655,31664452	31722597,31666086	Gene ID= ENSG00000171552.12 TPM= 24.92 Transcript Type= protein_coding
chr20	31664452	31722898	31664452	31722898	-	ENST00000307677.4@BCL2L1	ENST00000307677.4	protein_coding	31722618,31721655,31664452	31722898,31722348,31666086	Gene ID= ENSG00000171552.12 TPM= 166.2 Transcript Type= protein_coding
chr20	31664452	31722860	31664452	31722860	-	ENST00000376055.8@BCL2L1	ENST00000376055.8	protein_coding	31722618,31721844,31664452	31722860,31722348,31666086	Gene ID= ENSG00000171552.12 TPM= 9.5 Transcript Type= protein_coding
chr20	31703685	31709427	31703685	31709427	+	transcript1477.chr20.nnic@NA	transcript1477.chr20.nnic	NA	31703685	31709427	Gene ID= novel_gene_chr20_1478 TPM= 16.35 Transcript Type= NA
chr20	31739271	31801805	31739271	31801805	+	ENST00000300403.10@TPX2	ENST00000300403.10	protein_coding	31739271,31742541,31757407,31760057,31766556,31770343,31771560,31775867,31777487,31778813,31782249,31783705,31792735,31793848,31794402,31797404,31798365,31800970	31739621,31742647,31757582,31760179,31766682,31770471,31771682,31775988,31777638,31778984,31782390,31783921,31792830,31794024,31794548,31797515,31798552,31801805	Gene ID= ENSG00000088325.15 TPM= 4.67 Transcript Type= protein_coding
chr20	31844301	31845619	31844301	31845619	-	ENST00000375978.4@FOXS1	ENST00000375978.4	protein_coding	31844301	31845619	Gene ID= ENSG00000179772.7 TPM= 7.01 Transcript Type= protein_coding
chr20	31944342	31952092	31944342	31952092	-	ENST00000202017.5@PDRG1	ENST00000202017.5	protein_coding	31951875,31950312,31948808,31946496,31944342	31952092,31950387,31948882,31946576,31945889	Gene ID= ENSG00000088356.5 TPM= 24.52 Transcript Type= protein_coding
chr20	32010383	32032180	32010383	32032180	+	transcript1484.chr20.nic@CCM2L	transcript1484.chr20.nic	protein_coding	32010383,32014904,32017800,32017979,32018943,32022660,32025856,32028995,32029700,32031001	32010484,32015071,32017883,32018162,32019409,32022795,32025919,32029124,32029838,32032180	Gene ID= ENSG00000101331.15 TPM= 34.44 Transcript Type= NA
chr20	32019218	32032180	32019218	32032180	+	ENST00000452892.1@CCM2L	ENST00000452892.1	protein_coding	32019218,32022660,32025856,32028995,32029700,32031001	32019409,32022795,32025919,32029124,32029838,32032180	Gene ID= ENSG00000101331.15 TPM= 2.92 Transcript Type= protein_coding
chr20	32052242	32101849	32052242	32101849	+	ENST00000262651.3@HCK	ENST00000262651.3	protein_coding	32052242,32054216,32071662,32073319,32073716,32074623,32079774,32083894,32084391,32086628,32088568,32093863,32099004,32101317	32052486,32054281,32071782,32073361,32073818,32074721,32079877,32084043,32084543,32086807,32088644,32094016,32099135,32101849	Gene ID= ENSG00000101336.13 TPM= 22.18 Transcript Type= nonsense_mediated_decay
chr20	32109506	32167258	32109506	32167258	+	ENST00000398022.6@TM9SF4	ENST00000398022.6	protein_coding	32109506,32133013,32136074,32141497,32141766,32142982,32145091,32145312,32146785,32149634,32150622,32150800,32155103,32157794,32158451,32159992,32161276,32165295	32109755,32133126,32136173,32141665,32141895,32143105,32145209,32145423,32146855,32149766,32150703,32150875,32155186,32157969,32158514,32160111,32161365,32167258	Gene ID= ENSG00000101337.15 TPM= 68.3 Transcript Type= protein_coding
chr20	32109736	32167258	32109736	32167258	+	ENST00000217315.9@TM9SF4	ENST00000217315.9	protein_coding	32109736,32133013,32136074,32141497,32141766,32142982,32145091,32145312,32146785,32149634,32150622,32150800,32155103,32157794,32158451,32159992,32161276,32165295	32110039,32133126,32136173,32141665,32141895,32143105,32145209,32145423,32146855,32149766,32150703,32150875,32155186,32157969,32158514,32160111,32161365,32167258	Gene ID= ENSG00000101337.15 TPM= 14.59 Transcript Type= protein_coding
chr20	32123868	32127304	32123868	32127304	-	transcript1522.chr20.nnic@NA	transcript1522.chr20.nnic	NA	32123868	32127304	Gene ID= novel_gene_chr20_1523 TPM= 3.5 Transcript Type= NA
chr20	32156944	32157543	32156944	32157543	-	transcript1520.chr20.nnic@NA	transcript1520.chr20.nnic	NA	32156944	32157543	Gene ID= novel_gene_chr20_1521 TPM= 2.34 Transcript Type= NA
chr20	32186477	32190360	32186477	32190360	-	ENST00000565928.1@TSPY26P	ENST00000565928.1	transcribed_processed_pseudogene	32186477	32190360	Gene ID= ENSG00000235217.6 TPM= 4.67 Transcript Type= processed_transcript
chr20	32207880	32238667	32207880	32238667	+	ENST00000375749.7@POFUT1	ENST00000375749.7	protein_coding	32207880,32210071,32215269,32216609,32228263,32230819,32234473	32208065,32210192,32215451,32216721,32228455,32231061,32238667	Gene ID= ENSG00000101346.13 TPM= 26.85 Transcript Type= protein_coding
chr20	32464780	32483582	32464780	32483582	-	ENST00000326071.8@NOL4L	ENST00000326071.8	protein_coding	32483362,32474601,32464780	32483582,32474742,32465117	Gene ID= ENSG00000197183.14 TPM= 2.34 Transcript Type= protein_coding
chr20	32444297	32446991	32444297	32446991	-	transcript1556.chr20.nnic@NA	transcript1556.chr20.nnic	NA	32444297	32446991	Gene ID= novel_gene_chr20_1557 TPM= 9.34 Transcript Type= NA
chr20	32702691	32743997	32702691	32743997	-	ENST00000278980.10@COMMD7	ENST00000278980.10	protein_coding	32743308,32728089,32727893,32706704,32706583,32704814,32704440,32704023,32702691	32743997,32728142,32727995,32706760,32706620,32704904,32704489,32704071,32703458	Gene ID= ENSG00000149600.11 TPM= 85.82 Transcript Type= protein_coding
chr20	32702703	32743567	32702703	32743567	-	transcript1565.chr20.nic@COMMD7	transcript1565.chr20.nic	protein_coding	32743308,32728089,32727893,32706704,32706583,32704814,32704440,32702703	32743567,32728142,32727995,32706760,32706620,32704904,32704489,32704071	Gene ID= ENSG00000149600.11 TPM= 4.67 Transcript Type= NA
chr20	32702703	32743455	32702703	32743455	-	ENST00000446419.6@COMMD7	ENST00000446419.6	protein_coding	32743308,32728089,32727893,32706704,32706583,32704814,32704440,32704023,32702703	32743455,32728139,32727995,32706760,32706620,32704904,32704489,32704071,32703458	Gene ID= ENSG00000149600.11 TPM= 6.42 Transcript Type= protein_coding
chr20	32762424	32809356	32762424	32809356	+	ENST00000348286.6@DNMT3B	ENST00000348286.6	protein_coding	32762424,32780318,32781353,32784758,32786502,32787230,32788854,32791601,32792626,32795409,32795650,32796790,32797187,32798460,32799244,32800153,32800835,32801278,32802385,32807762	32762699,32780465,32781414,32784859,32786627,32787451,32789012,32791708,32792770,32795534,32795694,32796869,32797299,32798643,32799328,32800298,32800925,32801426,32802470,32809356	Gene ID= ENSG00000088305.18 TPM= 1.17 Transcript Type= protein_coding
chr20	32819893	32850405	32819893	32850405	+	ENST00000375571.5@MAPRE1	ENST00000375571.5	protein_coding	32819893,32825925,32833717,32836634,32839735,32846618,32848672	32820028,32826048,32833862,32836841,32839856,32846770,32850405	Gene ID= ENSG00000101367.8 TPM= 169.3 Transcript Type= protein_coding
chr20	32819918	32850403	32819918	32850403	+	transcript1575.chr20.nic@MAPRE1	transcript1575.chr20.nic	protein_coding	32819918,32825925,32833717,32836634,32839735,32846618	32820028,32826048,32833862,32836841,32839856,32850403	Gene ID= ENSG00000101367.8 TPM= 5.84 Transcript Type= NA
chr20	32850567	32852917	32850567	32852917	-	transcript1584.chr20.nnic@NA	transcript1584.chr20.nnic	NA	32850567	32852917	Gene ID= novel_gene_chr20_1585 TPM= 4.67 Transcript Type= NA
chr20	33283135	33309878	33283135	33309878	+	ENST00000253354.1@BPIFB1	ENST00000253354.1	protein_coding	33283135,33286033,33288741,33289885,33290957,33291907,33297525,33299899,33301233,33302359,33302916,33303958,33304846,33306002,33306911,33309708	33283254,33286188,33288882,33289992,33291106,33291988,33297588,33299984,33301412,33302412,33303074,33304025,33304891,33306065,33306987,33309878	Gene ID= ENSG00000125999.10 TPM= 1.17 Transcript Type= protein_coding
chr20	33358839	33401527	33358839	33401527	-	transcript1592.chr20.nnic@CDK5RAP1	transcript1592.chr20.nnic	protein_coding	33401428,33396761,33395013,33394032,33392142,33387323,33385650,33379461,33374115,33372642,33370499,33366859,33360351,33358839	33401527,33396852,33395116,33394066,33392242,33387533,33385770,33379691,33374212,33372697,33370629,33367008,33360491,33359123	Gene ID= ENSG00000101391.20 TPM= 2.34 Transcript Type= NA
chr20	33358839	33401561	33358839	33401561	-	ENST00000346416.6@CDK5RAP1	ENST00000346416.6	protein_coding	33401428,33396761,33395013,33394032,33392142,33387323,33385650,33379461,33374115,33372642,33370499,33366859,33360351,33358839	33401561,33397084,33395116,33394066,33392242,33387533,33385770,33379691,33374212,33372697,33370629,33367008,33360491,33359123	Gene ID= ENSG00000101391.20 TPM= 26.85 Transcript Type= protein_coding
chr20	33358839	33401535	33358839	33401535	-	transcript1597.chr20.nic@CDK5RAP1	transcript1597.chr20.nic	protein_coding	33401428,33396761,33395013,33394032,33392142,33387323,33385650,33379461,33372642,33370499,33366859,33360351,33358839	33401535,33397084,33395116,33394066,33392242,33387533,33385770,33379691,33374212,33370629,33367008,33360491,33359123	Gene ID= ENSG00000101391.20 TPM= 4.67 Transcript Type= NA
chr20	33358839	33401517	33358839	33401517	-	ENST00000473997.5@CDK5RAP1	ENST00000473997.5	protein_coding	33401428,33396761,33395013,33394032,33392142,33387323,33385650,33379461,33374115,33372642,33370499,33366859,33360351,33358839	33401517,33396936,33395116,33394066,33392242,33387533,33385770,33379691,33374212,33372697,33370629,33367008,33360491,33359123	Gene ID= ENSG00000101391.20 TPM= 1.17 Transcript Type= protein_coding
chr20	33407955	33443892	33407955	33443892	-	ENST00000217381.2@SNTA1	ENST00000217381.2	protein_coding	33443311,33438841,33417719,33412575,33412296,33410135,33408701,33407955	33443892,33439026,33417923,33412782,33412426,33410331,33408888,33408599	Gene ID= ENSG00000101400.5 TPM= 30.36 Transcript Type= protein_coding
chr20	33490061	33623954	33490061	33623954	+	transcript1621.chr20.nic@CBFA2T2	transcript1621.chr20.nic	protein_coding	33490061,33606956,33611094,33619517,33623115,33623773	33490301,33607099,33611335,33619606,33623296,33623954	Gene ID= ENSG00000078699.21 TPM= 2.34 Transcript Type= NA
chr20	33490061	33624255	33490061	33624255	+	transcript1624.chr20.nic@CBFA2T2	transcript1624.chr20.nic	protein_coding	33490061,33606956,33611094,33619517,33623115	33490301,33607099,33611335,33619606,33624255	Gene ID= ENSG00000078699.21 TPM= 2.34 Transcript Type= NA
chr20	33490061	33614130	33490061	33614130	+	transcript1626.chr20.nic@CBFA2T2	transcript1626.chr20.nic	protein_coding	33490061,33606956,33611094	33490301,33607099,33614130	Gene ID= ENSG00000078699.21 TPM= 3.5 Transcript Type= NA
chr20	33657087	33674472	33657087	33674472	-	transcript1631.chr20.nic@NECAB3	transcript1631.chr20.nic	protein_coding	33674224,33672398,33670684,33669687,33669375,33659885,33659653,33659497,33658722,33658477,33657942,33657087	33674472,33672422,33670792,33669712,33669472,33660395,33659732,33659550,33658834,33658554,33658033,33657857	Gene ID= ENSG00000125967.16 TPM= 5.6 Transcript Type= NA
chr20	33657087	33674472	33657087	33674472	-	transcript1635.chr20.nic@NECAB3	transcript1635.chr20.nic	protein_coding	33674224,33670684,33669687,33669375,33659885,33659653,33659497,33658722,33658477,33657942,33657087	33674472,33672422,33669712,33669472,33660395,33659732,33659550,33658834,33658554,33658033,33657857	Gene ID= ENSG00000125967.16 TPM= 2.8 Transcript Type= NA
chr20	33657087	33674414	33657087	33674414	-	transcript1636.chr20.nic@NECAB3	transcript1636.chr20.nic	protein_coding	33674224,33672398,33670684,33669375,33659885,33659653,33659497,33658722,33658477,33657942,33657087	33674414,33672422,33670792,33669712,33660395,33659732,33659550,33658834,33658554,33658033,33657857	Gene ID= ENSG00000125967.16 TPM= 4.44 Transcript Type= NA
chr20	33657088	33674420	33657088	33674420	-	ENST00000488489.5@NECAB3	ENST00000488489.5	protein_coding	33674224,33672398,33670684,33669687,33669375,33659885,33659653,33659497,33658722,33658477,33657942,33657088	33674420,33672422,33670781,33669712,33669472,33660395,33659732,33659550,33658834,33658554,33658033,33657857	Gene ID= ENSG00000125967.16 TPM= 7.71 Transcript Type= nonsense_mediated_decay
chr20	33657087	33674463	33657087	33674463	-	ENST00000375238.8@NECAB3	ENST00000375238.8	protein_coding	33674224,33672398,33670684,33669687,33669375,33660259,33659885,33659653,33659497,33658722,33658477,33657942,33657087	33674463,33672422,33670792,33669712,33669472,33660395,33660003,33659732,33659550,33658834,33658554,33658033,33657857	Gene ID= ENSG00000125967.16 TPM= 24.29 Transcript Type= protein_coding
chr20	33657087	33674408	33657087	33674408	-	ENST00000246190.10@NECAB3	ENST00000246190.10	protein_coding	33674224,33672398,33670684,33669687,33669375,33660259,33659885,33659497,33658722,33658477,33657942,33657087	33674408,33672422,33670792,33669712,33669472,33660395,33660003,33659732,33658834,33658554,33658033,33657857	Gene ID= ENSG00000125967.16 TPM= 1.87 Transcript Type= protein_coding
chr20	33666498	33668525	33666498	33668525	+	ENST00000330271.4@ACTL10	ENST00000330271.4	protein_coding	33666498	33668525	Gene ID= ENSG00000182584.4 TPM= 3.5 Transcript Type= protein_coding
chr20	33675683	33686404	33675683	33686404	-	ENST00000343380.5@E2F1	ENST00000343380.5	protein_coding	33686004,33680326,33679755,33678201,33677426,33677105,33675683	33686404,33680416,33679974,33678353,33677540,33677330,33676979	Gene ID= ENSG00000101412.12 TPM= 8.17 Transcript Type= protein_coding
chr20	33705927	33720269	33705927	33720269	-	transcript1661.chr20.nnic@PXMP4	transcript1661.chr20.nnic	protein_coding	33720095,33714674,33710555,33707146,33705927	33720269,33714736,33710753,33707969,33706355	Gene ID= ENSG00000101417.11 TPM= 3.5 Transcript Type= NA
chr20	33731657	33792269	33731657	33792269	+	ENST00000342427.6@ZNF341	ENST00000342427.6	protein_coding	33731657,33740902,33745103,33748923,33753172,33757148,33758716,33761862,33766851,33770084,33781291,33783732,33788863,33789518,33790988	33732052,33741012,33745299,33749072,33753423,33757322,33758806,33762055,33767041,33770292,33781387,33783864,33788974,33789588,33792269	Gene ID= ENSG00000131061.13 TPM= 13.63 Transcript Type= protein_coding
chr20	33731760	33792269	33731760	33792269	+	ENST00000375200.5@ZNF341	ENST00000375200.5	protein_coding	33731760,33740902,33745103,33748923,33753172,33757148,33758716,33761862,33766851,33770084,33781291,33783732,33788863,33789518,33790988	33732052,33741012,33745299,33749072,33753423,33757343,33758806,33762055,33767041,33770292,33781387,33783864,33788974,33789588,33792269	Gene ID= ENSG00000131061.13 TPM= 4.29 Transcript Type= protein_coding
chr20	33787088	33792269	33787088	33792269	+	ENST00000493497.1@ZNF341	ENST00000493497.1	protein_coding	33787088,33789518,33790988	33788974,33789588,33792269	Gene ID= ENSG00000131061.13 TPM= 1.95 Transcript Type= retained_intron
chr20	33993617	34080271	33993617	34080271	+	transcript1676.chr20.nic@RALY	transcript1676.chr20.nic	protein_coding	33993617,34031522,34065044,34072066,34073563,34073819,34075874,34076702,34077028,34078505,34079910	33994131,34031604,34065160,34072330,34073635,34073866,34076040,34076815,34077245,34078553,34080271	Gene ID= ENSG00000125970.11 TPM= 10.51 Transcript Type= NA
chr20	33993756	34080271	33993756	34080271	+	transcript1684.chr20.nnic@RALY	transcript1684.chr20.nnic	protein_coding	33993756,33994042,34031522,34072066,34073563,34075874,34076702,34077028,34078505,34079910	33993957,33994131,34031604,34072330,34073635,34076040,34076815,34077245,34078553,34080271	Gene ID= ENSG00000125970.11 TPM= 15.18 Transcript Type= NA
chr20	33993722	34080271	33993722	34080271	+	ENST00000246194.7@RALY	ENST00000246194.7	protein_coding	33993722,34031522,34072066,34073563,34073819,34075874,34076702,34077028,34078505,34079910	33994131,34031604,34072330,34073635,34073866,34076040,34076815,34077245,34078553,34080271	Gene ID= ENSG00000125970.11 TPM= 237.02 Transcript Type= protein_coding
chr20	34088298	34112332	34088298	34112332	-	ENST00000374980.2@EIF2S2	ENST00000374980.2	protein_coding	34112096,34105368,34103462,34098498,34097416,34096657,34093675,34090517,34088298	34112332,34105545,34103565,34098633,34097516,34096805,34093731,34090602,34089905	Gene ID= ENSG00000125977.6 TPM= 19.46 Transcript Type= protein_coding
chr20	34089440	34112283	34089440	34112283	-	transcript1700.chr20.nnic@EIF2S2	transcript1700.chr20.nnic	protein_coding	34112096,34105368,34103462,34098498,34097416,34096657,34090517,34089440	34112283,34105545,34103565,34098633,34097516,34096805,34090602,34089905	Gene ID= ENSG00000125977.6 TPM= 10.12 Transcript Type= NA
chr20	34280268	34303348	34280268	34303348	-	ENST00000217426.6@AHCY	ENST00000217426.6	protein_coding	34303243,34295395,34294081,34292358,34291419,34290731,34290551,34290332,34285440,34280268	34303348,34295585,34294156,34292507,34291531,34290938,34290638,34290449,34285634,34281165	Gene ID= ENSG00000101444.12 TPM= 79.4 Transcript Type= protein_coding
chr20	34363235	34511393	34363235	34511393	+	ENST00000374864.8@ITCH	ENST00000374864.8	protein_coding	34363235,34369394,34393791,34408651,34412515,34413742,34424480,34438474,34440155,34442208,34445287,34449411,34457390,34462093,34470048,34471444,34477772,34479630,34480599,34481066,34489266,34489822,34492501,34504331,34507695	34363349,34369470,34393881,34408792,34412639,34413879,34424525,34438631,34440344,34442303,34445461,34449480,34457474,34462221,34470120,34471515,34477860,34479789,34480732,34481206,34489386,34489926,34492597,34504403,34511393	Gene ID= ENSG00000078747.14 TPM= 5.84 Transcript Type= protein_coding
chr20	34406537	34409146	34406537	34409146	-	transcript1738.chr20.nnic@NA	transcript1738.chr20.nnic	NA	34406537	34409146	Gene ID= novel_gene_chr20_1739 TPM= 2.34 Transcript Type= NA
chr20	34463797	34463922	34463797	34463922	-	transcript1740.chr20.nnic@NA	transcript1740.chr20.nnic	NA	34463797	34463922	Gene ID= novel_gene_chr20_1741 TPM= 2.34 Transcript Type= NA
chr20	34516409	34540958	34516409	34540958	+	ENST00000357156.6@DYNLRB1	ENST00000357156.6	protein_coding	34516409,34526268,34534628,34540581	34516461,34526343,34534795,34540958	Gene ID= ENSG00000125971.16 TPM= 77.06 Transcript Type= protein_coding
chr20	34526486	34531486	34526486	34531486	-	transcript1737.chr20.nnic@Y_RNA	transcript1737.chr20.nnic	misc_RNA	34528349,34526486	34531486,34528016	Gene ID= ENSG00000206582.1 TPM= 17.51 Transcript Type= NA
chr20	34558718	34560345	34558718	34560345	+	transcript1742.chr20.nnic@MAP1LC3A	transcript1742.chr20.nnic	protein_coding	34558718,34559208,34559347,34559736,34560172	34558908,34559263,34559453,34559796,34560345	Gene ID= ENSG00000101460.12 TPM= 2.34 Transcript Type= NA
chr20	34558108	34560345	34558108	34560345	+	ENST00000360668.7@MAP1LC3A	ENST00000360668.7	protein_coding	34558108,34559208,34559347,34559736	34558908,34559263,34559453,34560345	Gene ID= ENSG00000101460.12 TPM= 85.23 Transcript Type= protein_coding
chr20	34558718	34560335	34558718	34560335	+	transcript1751.chr20.nic@MAP1LC3A	transcript1751.chr20.nic	protein_coding	34558718,34559208,34559347	34558908,34559263,34560335	Gene ID= ENSG00000101460.12 TPM= 4.67 Transcript Type= NA
chr20	34558718	34560345	34558718	34560345	+	ENST00000397709.1@MAP1LC3A	ENST00000397709.1	protein_coding	34558718,34559208,34559347,34559736,34560172	34558908,34559263,34559453,34559905,34560345	Gene ID= ENSG00000101460.12 TPM= 4.67 Transcript Type= protein_coding
chr20	34560542	34677085	34560542	34677085	-	ENST00000217446.7@PIGU	ENST00000217446.7	protein_coding	34676956,34657180,34645275,34644164,34637876,34634615,34616042,34588453,34585437,34581548,34575104,34560542	34677085,34657244,34645334,34644226,34637985,34634715,34616139,34588607,34585580,34581672,34575246,34560979	Gene ID= ENSG00000101464.10 TPM= 15.18 Transcript Type= protein_coding
chr20	34704290	34713439	34704290	34713439	+	ENST00000374810.7@TP53INP2	ENST00000374810.7	protein_coding	34704290,34705358,34708691,34709236,34710058	34704512,34705474,34708863,34709524,34713439	Gene ID= ENSG00000078804.12 TPM= 21.02 Transcript Type= protein_coding
chr20	34844720	34872860	34844720	34872860	-	ENST00000336431.9@GGT7	ENST00000336431.9	protein_coding	34872647,34863313,34862814,34861445,34860254,34859969,34859443,34856806,34854796,34854531,34852389,34852155,34851231,34849961,34844720	34872860,34863548,34862965,34861562,34860321,34860042,34859639,34856893,34854923,34854619,34852538,34852272,34851368,34850060,34845491	Gene ID= ENSG00000131067.16 TPM= 3.5 Transcript Type= protein_coding
chr20	34874963	34927962	34874963	34927962	+	ENST00000481284.5@ACSS2	ENST00000481284.5	protein_coding	34874963,34882794,34913096,34913393,34913753,34914096,34914323,34919435,34920539,34921006,34921330,34921544,34921786,34923323,34925698,34926105,34926877,34927087	34875137,34882989,34913187,34913496,34913825,34914171,34914437,34919572,34920709,34921139,34921462,34921600,34921866,34923431,34925766,34926281,34926951,34927962	Gene ID= ENSG00000131069.19 TPM= 8.89 Transcript Type= nonsense_mediated_decay
chr20	34876435	34927962	34876435	34927962	+	ENST00000360596.6@ACSS2	ENST00000360596.6	protein_coding	34876435,34882794,34913096,34913393,34913753,34914096,34914323,34919435,34920539,34921006,34921330,34921544,34921786,34923323,34925698,34926105,34926877,34927087	34876823,34882989,34913187,34913496,34913825,34914171,34914437,34919572,34920709,34921139,34921462,34921600,34921866,34923431,34925766,34926281,34926951,34927962	Gene ID= ENSG00000131069.19 TPM= 129.15 Transcript Type= protein_coding
chr20	34876614	34927962	34876614	34927962	+	ENST00000253382.5@ACSS2	ENST00000253382.5	protein_coding	34876614,34882794,34913096,34913393,34913753,34914096,34914323,34915218,34919435,34920539,34921006,34921330,34921544,34921786,34923323,34925698,34926105,34926877,34927087	34876823,34882989,34913187,34913496,34913825,34914171,34914437,34915256,34919572,34920709,34921139,34921462,34921600,34921866,34923431,34925766,34926281,34926951,34927962	Gene ID= ENSG00000131069.19 TPM= 2.28 Transcript Type= protein_coding
chr20	34876622	34927962	34876622	34927962	+	ENST00000476922.5@ACSS2	ENST00000476922.5	protein_coding	34876622,34882794,34923323,34925698,34926877,34927087	34876823,34882989,34923431,34925766,34926951,34927962	Gene ID= ENSG00000131069.19 TPM= 7.01 Transcript Type= processed_transcript
chr20	34928430	34955817	34928430	34955817	-	ENST00000216951.6@GSS	ENST00000216951.6	protein_coding	34955727,34951724,34945953,34942931,34942488,34941713,34936943,34936763,34935576,34931939,34931336,34929401,34928430	34955817,34951860,34946098,34943006,34942627,34941829,34937023,34936840,34935642,34932133,34931417,34929590,34928951	Gene ID= ENSG00000100983.9 TPM= 50.79 Transcript Type= protein_coding
chr20	34928430	34955817	34928430	34955817	-	transcript1798.chr20.nic@GSS	transcript1798.chr20.nic	protein_coding	34955727,34951724,34945953,34942488,34941713,34936943,34936763,34935576,34931939,34931336,34929401,34928430	34955817,34951860,34946098,34943006,34941829,34937023,34936840,34935642,34932133,34931417,34929590,34928951	Gene ID= ENSG00000100983.9 TPM= 22.77 Transcript Type= NA
chr20	34928436	34955817	34928436	34955817	-	transcript1799.chr20.nic@GSS	transcript1799.chr20.nic	protein_coding	34955727,34951724,34945953,34942931,34942488,34941713,34936943,34936763,34935576,34931939,34931336,34928436	34955817,34951860,34946098,34943006,34942627,34941829,34937023,34936840,34935642,34932133,34931417,34929590	Gene ID= ENSG00000100983.9 TPM= 5.25 Transcript Type= NA
chr20	34928436	34955817	34928436	34955817	-	transcript1801.chr20.nic@GSS	transcript1801.chr20.nic	protein_coding	34955727,34951724,34945953,34942488,34941713,34936943,34936763,34935576,34931939,34931336,34928436	34955817,34951860,34946098,34943006,34941829,34937023,34936840,34935642,34932133,34931417,34929590	Gene ID= ENSG00000100983.9 TPM= 2.92 Transcript Type= NA
chr20	34975403	35002437	34975403	35002437	+	ENST00000262873.11@MYH7B	ENST00000262873.11	protein_coding	34975403,34977632,34977934,34979390,34979661,34980578,34981033,34982459,34984692,34984854,34985066,34986100,34986886,34987149,34987557,34987765,34988092,34989740,34990014,34990234,34990738,34991004,34993102,34993334,34994146,34995336,34996346,34996613,34997083,34997251,34998295,34998511,34998719,34999056,34999571,34999791,35000293,35000768,35000988,35001245,35001431,35001948,35002177	34975499,34977680,34978096,34979496,34979804,34980734,34981060,34982555,34984715,34984946,34985129,34986198,34986989,34987287,34987675,34987914,34988262,34989919,34990146,34990310,34990825,34991121,34993225,34993470,34994401,34995578,34996522,34996758,34997173,34997640,34998421,34998629,34998915,34999405,34999695,34999906,35000689,35000893,35001158,35001349,35001526,35002085,35002437	Gene ID= ENSG00000078814.15 TPM= 1.17 Transcript Type= protein_coding
chr20	35002404	35092871	35002404	35092871	-	ENST00000252015.2@TRPC4AP	ENST00000252015.2	protein_coding	35092614,35078046,35069296,35057514,35054976,35049866,35044505,35035123,35021190,35016008,35013008,35010187,35008664,35007550,35006435,35005695,35004458,35003410,35002404	35092871,35078174,35069412,35057571,35055031,35049994,35044712,35035308,35021356,35016139,35013066,35010288,35008747,35007640,35006575,35005803,35004570,35003616,35003283	Gene ID= ENSG00000100991.11 TPM= 120.53 Transcript Type= protein_coding
chr20	35002404	35092811	35002404	35092811	-	transcript1818.chr20.nic@TRPC4AP	transcript1818.chr20.nic	protein_coding	35092614,35078046,35069296,35057514,35054976,35049866,35044505,35035123,35021190,35016008,35013008,35010187,35008664,35007550,35006435,35005695,35003410,35002404	35092811,35078174,35069412,35057571,35055031,35049994,35044712,35035308,35021356,35016139,35013066,35010288,35008747,35007640,35006575,35005803,35004570,35003283	Gene ID= ENSG00000100991.11 TPM= 9.13 Transcript Type= NA
chr20	35002404	35092807	35002404	35092807	-	ENST00000451813.6@TRPC4AP	ENST00000451813.6	protein_coding	35092614,35078046,35069296,35057514,35054976,35049866,35044505,35035123,35021190,35016008,35013008,35010187,35008664,35007550,35006435,35005695,35004458,35003410,35002404	35092807,35078174,35069412,35057571,35055031,35049994,35044712,35035308,35021332,35016139,35013066,35010288,35008747,35007640,35006575,35005803,35004570,35003616,35003283	Gene ID= ENSG00000100991.11 TPM= 49.02 Transcript Type= protein_coding
chr20	35052684	35056996	35052684	35056996	+	transcript1831.chr20.nnic@NA	transcript1831.chr20.nnic	NA	35052684	35056996	Gene ID= novel_gene_chr20_1832 TPM= 2.34 Transcript Type= NA
chr20	35115364	35147353	35115364	35147353	-	transcript1834.chr20.nnic@EDEM2	transcript1834.chr20.nnic	protein_coding	35147152,35146825,35144979,35142373,35137880,35134738,35134105,35131642,35126251,35123890,35118598,35115364	35147353,35146935,35145018,35142478,35138005,35134949,35134155,35131783,35126375,35124034,35118719,35115933	Gene ID= ENSG00000088298.12 TPM= 6.42 Transcript Type= NA
chr20	35115357	35147364	35115357	35147364	-	ENST00000374492.7@EDEM2	ENST00000374492.7	protein_coding	35147152,35146825,35144979,35142373,35137880,35134738,35131642,35126251,35123890,35118598,35115357	35147364,35146935,35145018,35142478,35138005,35134949,35131783,35126375,35124034,35118719,35115933	Gene ID= ENSG00000088298.12 TPM= 96.33 Transcript Type= protein_coding
chr20	35115364	35147319	35115364	35147319	-	ENST00000374491.3@EDEM2	ENST00000374491.3	protein_coding	35147152,35144979,35142373,35137880,35134738,35131642,35126251,35123890,35118598,35115364	35147319,35145018,35142478,35138005,35134949,35131783,35126375,35124034,35118719,35115933	Gene ID= ENSG00000088298.12 TPM= 5.25 Transcript Type= protein_coding
chr20	35171975	35216240	35171975	35216240	+	transcript1860.chr20.nic@PROCR	transcript1860.chr20.nic	protein_coding	35171975,35174702,35176168,35215893	35172224,35174953,35176446,35216240	Gene ID= ENSG00000101000.5 TPM= 9.34 Transcript Type= NA
chr20	35172073	35177362	35172073	35177362	+	ENST00000216968.4@PROCR	ENST00000216968.4	protein_coding	35172073,35174702,35176168,35176698	35172224,35174953,35176446,35177362	Gene ID= ENSG00000101000.5 TPM= 21.02 Transcript Type= protein_coding
chr20	35276361	35278131	35276361	35278131	-	transcript1865.chr20.nic@MMP24-AS1	transcript1865.chr20.nic	protein_coding	35278046,35277390,35276361	35278131,35277932,35277297	Gene ID= ENSG00000126005.16 TPM= 2.34 Transcript Type= NA
chr20	35277150	35278129	35277150	35278129	-	ENST00000424358.1@MMP24-AS1	ENST00000424358.1	protein_coding	35278046,35277150	35278129,35277932	Gene ID= ENSG00000126005.16 TPM= 4.67 Transcript Type= protein_coding
chr20	35277342	35278129	35277342	35278129	-	ENST00000456790.1@MMP24-AS1	ENST00000456790.1	protein_coding	35278009,35277342	35278129,35277932	Gene ID= ENSG00000126005.16 TPM= 1.17 Transcript Type= protein_coding
chr20	35276361	35278027	35276361	35278027	-	ENST00000435366.2@MMP24-AS1	ENST00000435366.2	protein_coding	35278009,35277390,35276361	35278027,35277932,35277297	Gene ID= ENSG00000126005.16 TPM= 8.17 Transcript Type= nonsense_mediated_decay
chr20	35226654	35277000	35226654	35277000	+	ENST00000246186.7@MMP24	ENST00000246186.7	protein_coding	35226654,35246840,35251905,35254450,35263791,35267205,35269760,35271569,35274272	35226984,35246988,35252021,35254754,35263952,35267419,35269898,35271835,35277000	Gene ID= ENSG00000125966.9 TPM= 37.95 Transcript Type= protein_coding
chr20	35263426	35277000	35263426	35277000	+	transcript1856.chr20.nic@MMP24	transcript1856.chr20.nic	protein_coding	35263426,35267205,35269760,35271569,35274272	35263952,35267419,35269898,35271835,35277000	Gene ID= ENSG00000125966.9 TPM= 20.43 Transcript Type= NA
chr20	35262214	35265719	35262214	35265719	-	transcript1871.chr20.nnic@NA	transcript1871.chr20.nnic	NA	35262214	35265719	Gene ID= novel_gene_chr20_1872 TPM= 11.68 Transcript Type= NA
chr20	35278911	35284985	35278911	35284985	-	ENST00000374450.7@EIF6	ENST00000374450.7	protein_coding	35284726,35284381,35284176,35280654,35279942,35279566,35278911	35284985,35284492,35284261,35280829,35280118,35279747,35279206	Gene ID= ENSG00000242372.6 TPM= 112.67 Transcript Type= protein_coding
chr20	35278911	35284804	35278911	35284804	-	ENST00000447927.6@EIF6	ENST00000447927.6	protein_coding	35284726,35284381,35284176,35279942,35279566,35278911	35284804,35284492,35284261,35280118,35279747,35279206	Gene ID= ENSG00000242372.6 TPM= 4.67 Transcript Type= nonsense_mediated_decay
chr20	35278911	35284715	35278911	35284715	-	ENST00000374436.7@EIF6	ENST00000374436.7	protein_coding	35284381,35284176,35280654,35279942,35279566,35278911	35284715,35284261,35280829,35280118,35279747,35279206	Gene ID= ENSG00000242372.6 TPM= 18.1 Transcript Type= protein_coding
chr20	35302566	35412141	35302566	35412141	-	ENST00000374385.9@UQCC1	ENST00000374385.9	protein_coding	35411940,35394092,35384038,35381918,35374184,35366557,35347164,35314688,35306666,35302566	35412141,35394196,35384133,35382025,35374256,35366614,35347272,35314765,35306779,35304069	Gene ID= ENSG00000101019.21 TPM= 23.35 Transcript Type= protein_coding
chr20	35302566	35411991	35302566	35411991	-	transcript1886.chr20.nic@UQCC1	transcript1886.chr20.nic	protein_coding	35411940,35394092,35384038,35381918,35366557,35347164,35314688,35306666,35302566	35411991,35394196,35384133,35382025,35366614,35347272,35314765,35306779,35304069	Gene ID= ENSG00000101019.21 TPM= 3.5 Transcript Type= NA
chr20	35345690	35367121	35345690	35367121	-	transcript1893.chr20.nic@UQCC1	transcript1893.chr20.nic	protein_coding	35366557,35345690	35367121,35347272	Gene ID= ENSG00000101019.21 TPM= 2.34 Transcript Type= NA
chr20	35302566	35411963	35302566	35411963	-	ENST00000349714.9@UQCC1	ENST00000349714.9	protein_coding	35411940,35394092,35384038,35381926,35366557,35347164,35314688,35306666,35302566	35411963,35394196,35384133,35382025,35366614,35347272,35314765,35306779,35304069	Gene ID= ENSG00000101019.21 TPM= 3.5 Transcript Type= protein_coding
chr20	35344110	35411974	35344110	35411974	-	ENST00000397554.5@UQCC1	ENST00000397554.5	protein_coding	35411940,35394092,35384038,35381918,35374184,35366557,35344110	35411974,35394196,35384133,35382025,35374256,35366614,35347272	Gene ID= ENSG00000101019.21 TPM= 3.5 Transcript Type= protein_coding
chr20	35407452	35410722	35407452	35410722	+	transcript1894.chr20.nnic@NA	transcript1894.chr20.nnic	NA	35407452	35410722	Gene ID= novel_gene_chr20_1895 TPM= 9.34 Transcript Type= NA
chr20	35433347	35438243	35433347	35438243	-	ENST00000374369.7@GDF5	ENST00000374369.7	protein_coding	35437298,35433347	35438243,35434783	Gene ID= ENSG00000125965.8 TPM= 12.84 Transcript Type= protein_coding
chr20	35455135	35511974	35455135	35511974	+	transcript1897.chr20.nic@CEP250	transcript1897.chr20.nic	protein_coding	35455135,35458304,35459983,35462265,35463575,35465743,35466039,35466966,35467304,35469890,35472050,35472673,35473374,35473870,35475502,35476449,35477871,35479231,35479646,35479976,35490637,35491212,35493429,35494524,35496577,35497719,35498595,35500049,35501845,35502390,35507738,35508035,35508943,35509998,35511363	35455242,35458374,35460105,35462553,35463631,35465825,35466204,35467072,35467555,35469986,35472151,35472831,35473552,35474052,35475646,35476595,35478101,35479424,35479773,35480145,35490804,35491346,35493572,35494657,35496715,35498067,35498716,35500169,35501966,35505005,35507851,35508190,35509044,35510054,35511974	Gene ID= ENSG00000126001.15 TPM= 8.17 Transcript Type= NA
chr20	35491051	35511974	35491051	35511974	+	transcript1898.chr20.nic@CEP250	transcript1898.chr20.nic	protein_coding	35491051,35493429,35494524,35496577,35497719,35498595,35500049,35501845,35502390,35507738,35508035,35508943,35509998,35511363	35491346,35493572,35494657,35496715,35498067,35498716,35500169,35501966,35505005,35507851,35508190,35509044,35510054,35511974	Gene ID= ENSG00000126001.15 TPM= 11.68 Transcript Type= NA
chr20	35542021	35557634	35542021	35557634	+	ENST00000348547.6@ERGIC3	ENST00000348547.6	protein_coding	35542021,35542323,35542513,35542822,35547412,35548509,35548808,35555044,35556033,35556207,35556973,35557194,35557425	35542185,35542393,35542600,35542941,35547505,35548674,35548865,35555075,35556129,35556271,35557109,35557249,35557634	Gene ID= ENSG00000125991.19 TPM= 291.12 Transcript Type= protein_coding
chr20	35542038	35557634	35542038	35557634	+	ENST00000357394.8@ERGIC3	ENST00000357394.8	protein_coding	35542038,35542323,35542513,35542822,35547412,35548509,35548808,35554372,35555044,35556033,35556207,35556973,35557194,35557425	35542185,35542393,35542600,35542941,35547505,35548674,35548865,35554386,35555075,35556129,35556271,35557109,35557249,35557634	Gene ID= ENSG00000125991.19 TPM= 5.06 Transcript Type= protein_coding
chr20	35626044	35664932	35626044	35664932	-	transcript1916.chr20.nic@CPNE1	transcript1916.chr20.nic	protein_coding	35664760,35658930,35655202,35632795,35632517,35632311,35632163,35631945,35631688,35631492,35631268,35631114,35630901,35630741,35630439,35627280,35626567,35626044	35664932,35659014,35655344,35632923,35632696,35632385,35632234,35632025,35631777,35631578,35631354,35631173,35631034,35630795,35630490,35627413,35626803,35626381	Gene ID= ENSG00000214078.12 TPM= 6.38 Transcript Type= NA
chr20	35626044	35664932	35626044	35664932	-	transcript1927.chr20.nic@CPNE1	transcript1927.chr20.nic	protein_coding	35664802,35632795,35632517,35632311,35632163,35631945,35631688,35631492,35631268,35631114,35630901,35630741,35630439,35627280,35626567,35626044	35664932,35632923,35632696,35632385,35632234,35632025,35631777,35631578,35631354,35631173,35631034,35630795,35630490,35627413,35626803,35626381	Gene ID= ENSG00000214078.12 TPM= 25.06 Transcript Type= NA
chr20	35626044	35664931	35626044	35664931	-	transcript1930.chr20.nic@CPNE1	transcript1930.chr20.nic	protein_coding	35664760,35632795,35632517,35632311,35632163,35631945,35631688,35631492,35631268,35631114,35630901,35630741,35630439,35627280,35626735,35626044	35664931,35632923,35632696,35632385,35632234,35632025,35631777,35631578,35631354,35631173,35631034,35630795,35630490,35627413,35626803,35626381	Gene ID= ENSG00000214078.12 TPM= 4.67 Transcript Type= NA
chr20	35626044	35664876	35626044	35664876	-	ENST00000397443.6@CPNE1	ENST00000397443.6	protein_coding	35664760,35632795,35632517,35632311,35632163,35631945,35631688,35631492,35631268,35631114,35630901,35630741,35630439,35627280,35626567,35626044	35664876,35632923,35632696,35632385,35632234,35632025,35631777,35631578,35631354,35631173,35631034,35630795,35630490,35627413,35626803,35626381	Gene ID= ENSG00000214078.12 TPM= 43.74 Transcript Type= protein_coding
chr20	35626031	35664886	35626031	35664886	-	ENST00000352393.8@CPNE1	ENST00000352393.8	protein_coding	35664760,35658930,35655202,35632795,35632517,35632311,35632163,35631945,35631688,35631492,35631268,35631114,35630901,35630741,35630439,35627280,35626567,35626031	35664886,35658982,35655344,35632923,35632696,35632385,35632234,35632025,35631777,35631578,35631354,35631173,35631034,35630795,35630490,35627413,35626803,35626381	Gene ID= ENSG00000214078.12 TPM= 4.04 Transcript Type= protein_coding
chr20	35648925	35664916	35648925	35664916	-	ENST00000374114.7@RBM12	ENST00000374114.7	protein_coding	35664760,35658930,35648925	35664916,35659014,35655344	Gene ID= ENSG00000244462.7 TPM= 10.51 Transcript Type= protein_coding
chr20	35668983	35699349	35668983	35699349	-	ENST00000397425.5@NFS1	ENST00000397425.5	protein_coding	35699310,35698481,35697684,35696377,35690413,35681888,35680737,35675045,35674512,35674350,35673601,35672755,35668983	35699349,35698590,35697800,35696460,35690565,35681981,35680871,35675202,35674617,35674431,35673684,35672844,35669685	Gene ID= ENSG00000244005.12 TPM= 9.34 Transcript Type= protein_coding
chr20	35694572	35699304	35694572	35699304	-	ENST00000306750.3@NFS1	ENST00000306750.3	protein_coding	35699192,35698481,35697684,35696377,35694572	35699304,35698590,35697800,35696460,35694885	Gene ID= ENSG00000244005.12 TPM= 1.17 Transcript Type= protein_coding
chr20	35699353	35700984	35699353	35700984	+	ENST00000374077.7@ROMO1	ENST00000374077.7	protein_coding	35699353,35699633,35700798	35699456,35699763,35700984	Gene ID= ENSG00000125995.15 TPM= 60.71 Transcript Type= protein_coding
chr20	35699451	35700980	35699451	35700980	+	ENST00000336695.4@ROMO1	ENST00000336695.4	protein_coding	35699451,35700798	35699763,35700980	Gene ID= ENSG00000125995.15 TPM= 10.51 Transcript Type= protein_coding
chr20	35703610	35742312	35703610	35742312	-	ENST00000361162.10@RBM39	ENST00000361162.10	protein_coding	35741941,35740824,35738968,35731941,35729462,35729312,35725038,35724570,35721740,35716740,35714185,35713019,35709224,35707120,35705225,35704668,35703610	35742312,35740887,35739017,35732135,35729527,35729365,35725155,35724722,35721877,35716805,35714389,35713096,35709256,35707201,35705330,35704746,35704581	Gene ID= ENSG00000131051.22 TPM= 30.94 Transcript Type= protein_coding
chr20	35703611	35742221	35703611	35742221	-	transcript1976.chr20.nic@RBM39	transcript1976.chr20.nic	protein_coding	35741941,35740824,35738968,35731941,35729462,35729312,35725038,35724570,35721740,35716740,35714185,35713019,35709224,35707120,35705225,35704668,35703611	35742221,35740887,35740597,35732135,35729527,35729365,35725155,35724722,35721877,35716805,35714389,35713096,35709256,35707201,35705330,35704746,35704581	Gene ID= ENSG00000131051.22 TPM= 8.76 Transcript Type= NA
chr20	35703611	35742274	35703611	35742274	-	ENST00000403542.6@RBM39	ENST00000403542.6	protein_coding	35741941,35740824,35740525,35738968,35731941,35729462,35729312,35725038,35724570,35721740,35716740,35714185,35713019,35709224,35707120,35705225,35704668,35703611	35742274,35740887,35740597,35739017,35732135,35729527,35729365,35725155,35724722,35721877,35716805,35714389,35713096,35709274,35707201,35705330,35704746,35704581	Gene ID= ENSG00000131051.22 TPM= 30.88 Transcript Type= nonsense_mediated_decay
chr20	35703609	35742236	35703609	35742236	-	ENST00000463004.5@RBM39	ENST00000463004.5	protein_coding	35741941,35738968,35731941,35729462,35729312,35725038,35724570,35721740,35716740,35714185,35713019,35709224,35707120,35705225,35704668,35703609	35742236,35740887,35732135,35729527,35729365,35725155,35724722,35721877,35716805,35714389,35713096,35709274,35707201,35705330,35704746,35704581	Gene ID= ENSG00000131051.22 TPM= 7.3 Transcript Type= retained_intron
chr20	35704326	35742248	35704326	35742248	-	ENST00000444878.5@RBM39	ENST00000444878.5	protein_coding	35741941,35740824,35740525,35738968,35731941,35729462,35729312,35725038,35724570,35721740,35716740,35714185,35713019,35709224,35707120,35705225,35704668,35704326	35742248,35740887,35740597,35739017,35732135,35729527,35729365,35725155,35724722,35721877,35716805,35714389,35713096,35709256,35707201,35705330,35704746,35704581	Gene ID= ENSG00000131051.22 TPM= 39.93 Transcript Type= nonsense_mediated_decay
chr20	35704326	35742256	35704326	35742256	-	ENST00000429968.5@RBM39	ENST00000429968.5	protein_coding	35741941,35740824,35738968,35734186,35731941,35729462,35729312,35725038,35724570,35721740,35716740,35714185,35713019,35709224,35707120,35705225,35704668,35704326	35742256,35740887,35739017,35734257,35732135,35729527,35729365,35725155,35724722,35721877,35716805,35714389,35713096,35709274,35707201,35705330,35704746,35704581	Gene ID= ENSG00000131051.22 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr20	35705522	35707049	35705522	35707049	+	transcript2031.chr20.nnic@NA	transcript2031.chr20.nnic	NA	35705522	35707049	Gene ID= novel_gene_chr20_2032 TPM= 18.68 Transcript Type= NA
chr20	35706434	35712457	35706434	35712457	+	transcript2029.chr20.nnic@NA	transcript2029.chr20.nnic	NA	35706434	35712457	Gene ID= novel_gene_chr20_2030 TPM= 94.58 Transcript Type= NA
chr20	35771983	35950381	35771983	35950381	+	ENST00000374012.7@PHF20	ENST00000374012.7	protein_coding	35771983,35801491,35842573,35847350,35858302,35863013,35869438,35870955,35871650,35899370,35913249,35914033,35917484,35927780,35931249,35938697,35940864,35947485	35772079,35801605,35842744,35847434,35858381,35863400,35869551,35871134,35871829,35899648,35913347,35914197,35917662,35927879,35931444,35939108,35941047,35950381	Gene ID= ENSG00000025293.16 TPM= 14.01 Transcript Type= protein_coding
chr20	35771990	35913335	35771990	35913335	+	transcript2036.chr20.nnic@PHF20	transcript2036.chr20.nnic	protein_coding	35771990,35801491,35812623,35842573,35847350,35858302,35863013,35869438,35870955,35871650,35899370,35913249	35772079,35801605,35812719,35842744,35847434,35858381,35863400,35869551,35871134,35871829,35899648,35913335	Gene ID= ENSG00000025293.16 TPM= 2.34 Transcript Type= NA
chr20	35772033	35775058	35772033	35775058	+	ENST00000617560.1@PHF20	ENST00000617560.1	protein_coding	35772033,35774488	35772079,35775058	Gene ID= ENSG00000025293.16 TPM= 4.67 Transcript Type= processed_transcript
chr20	35772026	35913316	35772026	35913316	+	ENST00000339089.10@PHF20	ENST00000339089.10	protein_coding	35772026,35782328,35801491,35842573,35847350,35858302,35863013,35869438,35870955,35871650,35899370,35913249	35772079,35782609,35801605,35842744,35847434,35858381,35863400,35869551,35871134,35871829,35899648,35913316	Gene ID= ENSG00000025293.16 TPM= 2.34 Transcript Type= protein_coding
chr20	35772026	35913316	35772026	35913316	+	ENST00000481202.5@PHF20	ENST00000481202.5	protein_coding	35772026,35801491,35842573,35847350,35863013,35869438,35870955,35871650,35899370,35913249	35772079,35801605,35842744,35847434,35863400,35869551,35871134,35871829,35899648,35913316	Gene ID= ENSG00000025293.16 TPM= 1.17 Transcript Type= processed_transcript
chr20	35953617	35954626	35953617	35954626	-	ENST00000305978.6@SCAND1	ENST00000305978.6	protein_coding	35954448,35953617	35954626,35954339	Gene ID= ENSG00000171222.10 TPM= 44.37 Transcript Type= protein_coding
chr20	35953973	35955367	35953973	35955367	+	transcript2045.chr20.nnic@NA	transcript2045.chr20.nnic	NA	35953973	35955367	Gene ID= novel_gene_chr20_2046 TPM= 3.5 Transcript Type= NA
chr20	35954707	35955368	35954707	35955368	+	ENST00000614708.1@CNBD2	ENST00000614708.1	protein_coding	35954707	35955368	Gene ID= ENSG00000149646.12 TPM= 1.17 Transcript Type= protein_coding
chr20	36045622	36050960	36045622	36050960	-	ENST00000565493.1@NORAD	ENST00000565493.1	lincRNA	36045622	36050960	Gene ID= ENSG00000260032.1 TPM= 68.89 Transcript Type= lincRNA
chr20	36154604	36230327	36154604	36230327	+	transcript2056.chr20.nic@EPB41L1	transcript2056.chr20.nic	protein_coding	36154604,36175551,36177952,36178630,36182272,36185117,36187676,36188347,36190277,36190622,36194212,36197859,36209488,36212272,36218876,36219761,36221864,36222278,36229332	36154896,36175715,36178056,36178672,36182347,36185335,36187763,36188499,36190374,36190797,36194360,36198041,36209898,36212376,36218962,36219844,36221944,36222394,36230327	Gene ID= ENSG00000088367.21 TPM= 3.79 Transcript Type= NA
chr20	36154716	36230327	36154716	36230327	+	transcript2057.chr20.nic@EPB41L1	transcript2057.chr20.nic	protein_coding	36154716,36175551,36177952,36178630,36182272,36185117,36187676,36188347,36190277,36190622,36194212,36197859,36212272,36214357,36218876,36219761,36221864,36222278,36229332	36154896,36175715,36178056,36178672,36182347,36185335,36187763,36188499,36190374,36190797,36194360,36198041,36212376,36214440,36218962,36219844,36221944,36222394,36230327	Gene ID= ENSG00000088367.21 TPM= 4.96 Transcript Type= NA
chr20	36154604	36230327	36154604	36230327	+	transcript2060.chr20.nic@EPB41L1	transcript2060.chr20.nic	protein_coding	36154604,36175551,36177952,36178630,36182272,36185117,36187676,36188347,36190277,36190622,36194212,36197859,36212272,36218876,36219761,36221864,36222278,36229332	36154896,36175715,36178056,36178672,36182347,36185335,36187763,36188499,36190374,36190797,36194360,36198041,36212376,36218962,36219844,36221944,36222394,36230327	Gene ID= ENSG00000088367.21 TPM= 3.79 Transcript Type= NA
chr20	36137078	36138418	36137078	36138418	-	transcript2064.chr20.nnic@NA	transcript2064.chr20.nnic	NA	36137078	36138418	Gene ID= novel_gene_chr20_2065 TPM= 2.34 Transcript Type= NA
chr20	36236487	36256933	36236487	36256933	+	transcript2072.chr20.nnic@AAR2	transcript2072.chr20.nnic	protein_coding	36236487,36239821,36244697,36255578	36237037,36240625,36244926,36256933	Gene ID= ENSG00000131043.11 TPM= 10.8 Transcript Type= NA
chr20	36236465	36256933	36236465	36256933	+	ENST00000320849.8@AAR2	ENST00000320849.8	protein_coding	36236465,36239821,36244697,36255578	36236503,36240625,36244926,36256933	Gene ID= ENSG00000131043.11 TPM= 127.56 Transcript Type= protein_coding
chr20	36236485	36256933	36236485	36256933	+	ENST00000373932.3@AAR2	ENST00000373932.3	protein_coding	36236485,36239821,36244697,36255578	36236782,36240625,36244926,36256933	Gene ID= ENSG00000131043.11 TPM= 14.3 Transcript Type= protein_coding
chr20	36461338	36528637	36461338	36528637	+	ENST00000475894.5@DLGAP4	ENST00000475894.5	protein_coding	36461338,36496705,36499588,36500199,36524250,36525851,36526813	36461510,36497066,36499676,36500611,36524341,36526006,36528637	Gene ID= ENSG00000080845.17 TPM= 35.03 Transcript Type= protein_coding
chr20	36461747	36527239	36461747	36527239	+	ENST00000340491.8@DLGAP4	ENST00000340491.8	protein_coding	36461747,36496705,36499588,36500199,36524250,36525851,36526813	36462599,36497066,36499676,36500611,36524341,36526006,36527239	Gene ID= ENSG00000080845.17 TPM= 1.17 Transcript Type= protein_coding
chr20	36541497	36549825	36541497	36549825	+	ENST00000346786.2@MYL9	ENST00000346786.2	protein_coding	36541497,36544859,36549077	36541561,36545068,36549825	Gene ID= ENSG00000101335.9 TPM= 46.7 Transcript Type= protein_coding
chr20	36573445	36593945	36573445	36593945	+	transcript2092.chr20.nnic@TGIF2	transcript2092.chr20.nnic	protein_coding	36573445,36578741,36590910	36573524,36578966,36593945	Gene ID= ENSG00000118707.9 TPM= 11.29 Transcript Type= NA
chr20	36573488	36593950	36573488	36593950	+	ENST00000373874.6@TGIF2	ENST00000373874.6	protein_coding	36573488,36578741,36590910	36573652,36578966,36593950	Gene ID= ENSG00000118707.9 TPM= 3.12 Transcript Type= protein_coding
chr20	36573607	36593950	36573607	36593950	+	ENST00000373872.8@TGIF2	ENST00000373872.8	protein_coding	36573607,36578741,36590910	36573745,36578966,36593950	Gene ID= ENSG00000118707.9 TPM= 41.65 Transcript Type= protein_coding
chr20	36605734	36612557	36605734	36612557	+	ENST00000344795.7@C20orf24	ENST00000344795.7	protein_coding	36605734,36607715,36609601,36612010	36606065,36607818,36609730,36612557	Gene ID= ENSG00000101084.17 TPM= 96.91 Transcript Type= protein_coding
chr20	36605789	36612557	36605789	36612557	+	ENST00000483815.5@C20orf24	ENST00000483815.5	protein_coding	36605789,36607715,36607890,36609601,36612010	36606065,36607818,36608000,36609730,36612557	Gene ID= ENSG00000101084.17 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr20	36605822	36612557	36605822	36612557	+	ENST00000342422.3@C20orf24	ENST00000342422.3	protein_coding	36605822,36607715,36612010	36606065,36607818,36612557	Gene ID= ENSG00000101084.17 TPM= 3.5 Transcript Type= protein_coding
chr20	36605785	36612557	36605785	36612557	+	ENST00000492721.5@C20orf24	ENST00000492721.5	protein_coding	36605785,36607715,36607890,36612010	36606065,36607818,36608000,36612557	Gene ID= ENSG00000101084.17 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr20	36612318	36646216	36612318	36646216	-	ENST00000262866.8@SLA2	ENST00000262866.8	protein_coding	36645837,36641245,36634490,36633543,36632595,36615225,36614305,36612318	36646216,36641378,36634589,36633629,36632698,36615374,36614437,36613986	Gene ID= ENSG00000101082.13 TPM= 2.34 Transcript Type= protein_coding
chr20	36651766	36746133	36651766	36746133	-	transcript2120.chr20.nnic@NDRG3	transcript2120.chr20.nnic	protein_coding	36746045,36721679,36706972,36688679,36687492,36684413,36682518,36680816,36671341,36666289,36665236,36665046,36656497,36656360,36651766	36746133,36721783,36707007,36688784,36687612,36684475,36682578,36680902,36671397,36666392,36665301,36665097,36656532,36656411,36653701	Gene ID= ENSG00000101079.20 TPM= 3.79 Transcript Type= NA
chr20	36651766	36746133	36651766	36746133	-	transcript2122.chr20.nic@NDRG3	transcript2122.chr20.nic	protein_coding	36746045,36721679,36706972,36684413,36682518,36680816,36671341,36666289,36665236,36665046,36660337,36656497,36656360,36651766	36746133,36721783,36707007,36684475,36682578,36680902,36671397,36666392,36665301,36665097,36660384,36656532,36656411,36653701	Gene ID= ENSG00000101079.20 TPM= 4.38 Transcript Type= NA
chr20	36651766	36746078	36651766	36746078	-	ENST00000349004.5@NDRG3	ENST00000349004.5	protein_coding	36746045,36721679,36706972,36688679,36687492,36684413,36682518,36680816,36671341,36666289,36665236,36665046,36660337,36656497,36656360,36651766	36746078,36721783,36707007,36688784,36687612,36684475,36682578,36680902,36671397,36666392,36665301,36665097,36660384,36656532,36656411,36653701	Gene ID= ENSG00000101079.20 TPM= 53.42 Transcript Type= protein_coding
chr20	36651766	36746053	36651766	36746053	-	ENST00000373803.6@NDRG3	ENST00000373803.6	protein_coding	36746045,36721679,36706972,36688679,36687492,36684413,36682518,36680816,36671341,36666289,36665236,36665046,36660337,36656497,36656360,36654801,36651766	36746053,36721783,36707007,36688784,36687612,36684475,36682578,36680902,36671397,36666392,36665301,36665097,36660384,36656532,36656411,36654839,36653701	Gene ID= ENSG00000101079.20 TPM= 1.46 Transcript Type= protein_coding
chr20	36751795	36773815	36751795	36773815	-	ENST00000373750.8@DSN1	ENST00000373750.8	protein_coding	36773662,36771425,36770873,36767969,36766769,36762461,36758558,36758087,36755682,36754763,36751795	36773815,36771473,36771193,36768042,36766841,36762548,36758617,36758161,36755829,36754850,36752897	Gene ID= ENSG00000149636.15 TPM= 4.67 Transcript Type= protein_coding
chr20	36751795	36773760	36751795	36773760	-	ENST00000448110.6@DSN1	ENST00000448110.6	protein_coding	36773662,36770873,36767969,36766769,36762461,36758558,36758087,36755682,36754763,36751795	36773760,36771193,36768042,36766841,36762548,36758617,36758161,36755829,36754850,36752897	Gene ID= ENSG00000149636.15 TPM= 3.5 Transcript Type= protein_coding
chr20	36777442	36863686	36777442	36863686	-	ENST00000237536.8@SOGA1	ENST00000237536.8	protein_coding	36862658,36839217,36829054,36817407,36815126,36812704,36809982,36808513,36805853,36804735,36802856,36797502,36796882,36793249,36777442	36863686,36839441,36829212,36817469,36816307,36812844,36810107,36808743,36805957,36804902,36803107,36797573,36796952,36794599,36786637	Gene ID= ENSG00000149639.14 TPM= 22.18 Transcript Type= protein_coding
chr20	36827358	36863576	36827358	36863576	-	transcript2134.chr20.nic@SOGA1	transcript2134.chr20.nic	protein_coding	36862658,36839217,36827358	36863576,36839441,36829212	Gene ID= ENSG00000149639.14 TPM= 2.34 Transcript Type= NA
chr20	36890229	36951843	36890229	36951843	-	ENST00000262878.4@SAMHD1	ENST00000262878.4	protein_coding	36951436,36946738,36941039,36935029,36930760,36927182,36919364,36916949,36916722,36912461,36911218,36905364,36904157,36898440,36897822,36890229	36951843,36946804,36941111,36935189,36930875,36927252,36919519,36917049,36916830,36912552,36911333,36905503,36904249,36898544,36897959,36893066	Gene ID= ENSG00000101347.8 TPM= 51.37 Transcript Type= protein_coding
chr20	36996349	37095995	36996349	37095995	-	ENST00000373664.7@RBL1	ENST00000373664.7	protein_coding	37095773,37088989,37067986,37067233,37066993,37066724,37065424,37062084,37061103,37056146,37055553,37047053,37044086,37040153,37035242,37032665,37022650,37020659,37018279,37007411,37003702,36996349	37095995,37089122,37068186,37067297,37067121,37066884,37065473,37062270,37061269,37056258,37055656,37047190,37044250,37040285,37035508,37032876,37022826,37020730,37018369,37007559,37003866,36998929	Gene ID= ENSG00000080839.11 TPM= 3.5 Transcript Type= protein_coding
chr20	37179046	37241623	37179046	37241623	+	ENST00000237530.10@RPN2	ENST00000237530.10	protein_coding	37179046,37184180,37198397,37199050,37203885,37204767,37207273,37210047,37213760,37223878,37225688,37228550,37229973,37232296,37234020,37236580,37241303	37179369,37184373,37198492,37199225,37203960,37204901,37207449,37210165,37213865,37223969,37225802,37228744,37230059,37232391,37234095,37236709,37241623	Gene ID= ENSG00000118705.16 TPM= 719.35 Transcript Type= protein_coding
chr20	37179063	37241623	37179063	37241623	+	transcript2160.chr20.nic@RPN2	transcript2160.chr20.nic	protein_coding	37179063,37184180,37198397,37199050,37203885,37204767,37207273,37210047,37213760,37223878,37225688,37228550,37232296,37234020,37236580,37241303	37179369,37184373,37198492,37199225,37203960,37204901,37207449,37210165,37213865,37223969,37225802,37230059,37232391,37234095,37236709,37241623	Gene ID= ENSG00000118705.16 TPM= 24.25 Transcript Type= NA
chr20	37289651	37317260	37289651	37317260	+	transcript2169.chr20.nnic@MANBAL	transcript2169.chr20.nnic	protein_coding	37289651,37297347,37298763,37301208,37316308	37289686,37297534,37298879,37301413,37317260	Gene ID= ENSG00000101363.12 TPM= 11.29 Transcript Type= NA
chr20	37289663	37317260	37289663	37317260	+	ENST00000397152.7@MANBAL	ENST00000397152.7	protein_coding	37289663,37297296,37298763,37301208,37316308	37289686,37297534,37298879,37301413,37317260	Gene ID= ENSG00000101363.12 TPM= 8.96 Transcript Type= protein_coding
chr20	37289639	37317260	37289639	37317260	+	transcript2172.chr20.nnic@MANBAL	transcript2172.chr20.nnic	protein_coding	37289639,37298763,37301208,37316308	37289686,37298879,37301413,37317260	Gene ID= ENSG00000101363.12 TPM= 27.05 Transcript Type= NA
chr20	37289638	37317260	37289638	37317260	+	ENST00000373606.7@MANBAL	ENST00000373606.7	protein_coding	37289638,37301208,37316308	37289686,37301413,37317260	Gene ID= ENSG00000101363.12 TPM= 15.76 Transcript Type= protein_coding
chr20	37344729	37405422	37344729	37405422	+	transcript2175.chr20.nnic@SRC	transcript2175.chr20.nnic	protein_coding	37344729,37345049,37365204,37382619,37384150,37386075,37393895,37394174,37396162,37397699,37400115,37401602,37402435,37402749,37403171	37344887,37345229,37365277,37382786,37384403,37386174,37393993,37394277,37396311,37397854,37400294,37401678,37402588,37402880,37405422	Gene ID= ENSG00000197122.11 TPM= 8.56 Transcript Type= NA
chr20	37346114	37405422	37346114	37405422	+	transcript2176.chr20.nnic@SRC	transcript2176.chr20.nnic	protein_coding	37346114,37347118,37365204,37382619,37384150,37386075,37393895,37394174,37396162,37397699,37400115,37401602,37402435,37402749,37403171	37346255,37347236,37365277,37382786,37384403,37386174,37393993,37394277,37396311,37397854,37400294,37401678,37402588,37402880,37405422	Gene ID= ENSG00000197122.11 TPM= 9.73 Transcript Type= NA
chr20	37344685	37405422	37344685	37405422	+	transcript2178.chr20.nic@SRC	transcript2178.chr20.nic	protein_coding	37344685,37365204,37382619,37384150,37386075,37393895,37394174,37396162,37397699,37400115,37401602,37402435,37402749,37403171	37344887,37365277,37382786,37384403,37386174,37393993,37394277,37396311,37397854,37400294,37401678,37402588,37402880,37405422	Gene ID= ENSG00000197122.11 TPM= 10.89 Transcript Type= NA
chr20	37391753	37392904	37391753	37392904	-	transcript2183.chr20.nnic@NA	transcript2183.chr20.nnic	NA	37391753	37392904	Gene ID= novel_gene_chr20_2184 TPM= 3.5 Transcript Type= NA
chr20	37517418	37527931	37517418	37527931	-	ENST00000414542.6@BLCAP	ENST00000414542.6	protein_coding	37527793,37521319,37517418	37527931,37521451,37519350	Gene ID= ENSG00000166619.12 TPM= 12.26 Transcript Type= protein_coding
chr20	37517417	37527931	37517417	37527931	-	ENST00000373537.6@BLCAP	ENST00000373537.6	protein_coding	37527793,37517417	37527931,37519350	Gene ID= ENSG00000166619.12 TPM= 159.38 Transcript Type= protein_coding
chr20	37518383	37521915	37518383	37521915	+	transcript2196.chr20.nnic@NA	transcript2196.chr20.nnic	NA	37518383	37521915	Gene ID= novel_gene_chr20_2197 TPM= 2.34 Transcript Type= NA
chr20	37521219	37523690	37521219	37523690	+	ENST00000346199.2@NNAT	ENST00000346199.2	protein_coding	37521219,37522667	37521403,37523690	Gene ID= ENSG00000053438.8 TPM= 1.17 Transcript Type= protein_coding
chr20	37694052	37872117	37694052	37872117	+	transcript2198.chr20.nic@CTNNBL1	transcript2198.chr20.nic	protein_coding	37694052,37694927,37732879,37737378,37746468,37757559,37765197,37767953,37777345,37777654,37779187,37802867,37840102,37842339,37859899,37860272,37871925	37694152,37695033,37733067,37737484,37746607,37757656,37765290,37768044,37777417,37777712,37779335,37803048,37840199,37842419,37860036,37860344,37872117	Gene ID= ENSG00000132792.18 TPM= 3.5 Transcript Type= NA
chr20	37694074	37872117	37694074	37872117	+	transcript2199.chr20.nnic@CTNNBL1	transcript2199.chr20.nnic	protein_coding	37694074,37724937,37732879,37737378,37746468,37757559,37765197,37767953,37777345,37777654,37779187,37802867,37840102,37842339,37859899,37860272,37871925	37694152,37725048,37733067,37737484,37746607,37757656,37765290,37768044,37777417,37777712,37779335,37803048,37840199,37842419,37860036,37860344,37872117	Gene ID= ENSG00000132792.18 TPM= 3.5 Transcript Type= NA
chr20	37694006	37872129	37694006	37872129	+	ENST00000361383.10@CTNNBL1	ENST00000361383.10	protein_coding	37694006,37732879,37737378,37746468,37757559,37765197,37767953,37777345,37777654,37779187,37802867,37840102,37842339,37859899,37860272,37871925	37694152,37733067,37737484,37746607,37757656,37765290,37768044,37777417,37777712,37779335,37803048,37840199,37842419,37860036,37860344,37872129	Gene ID= ENSG00000132792.18 TPM= 95.74 Transcript Type= protein_coding
chr20	37870287	37872116	37870287	37872116	+	transcript2207.chr20.nnic@NA	transcript2207.chr20.nnic	NA	37870287	37872116	Gene ID= novel_gene_chr20_2208 TPM= 2.34 Transcript Type= NA
chr20	37903104	37945350	37903104	37945350	+	ENST00000373461.8@VSTM2L	ENST00000373461.8	protein_coding	37903104,37931635,37933539,37943981	37903471,37931804,37933589,37945350	Gene ID= ENSG00000132821.11 TPM= 30.36 Transcript Type= protein_coding
chr20	37914511	37917341	37914511	37917341	+	transcript2212.chr20.nnic@NA	transcript2212.chr20.nnic	NA	37914511	37917341	Gene ID= novel_gene_chr20_2213 TPM= 2.34 Transcript Type= NA
chr20	37983007	38033461	37983007	38033461	-	ENST00000373448.6@TTI1	ENST00000373448.6	protein_coding	38033404,38019005,38011515,38006197,38002628,37999188,37996749,37996375,37983007	38033461,38019144,38013857,38006397,38002776,37999328,37996953,37996462,37983639	Gene ID= ENSG00000101407.12 TPM= 1.55 Transcript Type= protein_coding
chr20	37983007	38033468	37983007	38033468	-	ENST00000373447.7@TTI1	ENST00000373447.7	protein_coding	38033404,38011515,38006197,38002628,37999188,37996749,37996375,37983007	38033468,38013857,38006397,38002776,37999328,37996953,37996462,37983639	Gene ID= ENSG00000101407.12 TPM= 20.82 Transcript Type= protein_coding
chr20	37983022	38033471	37983022	38033471	-	transcript2217.chr20.nnic@TTI1	transcript2217.chr20.nnic	protein_coding	38033404,38011515,38006197,38002628,37999188,37996375,37983022	38033471,38013857,38006397,38002776,37999328,37996462,37983639	Gene ID= ENSG00000101407.12 TPM= 4.47 Transcript Type= NA
chr20	38033765	38092361	38033765	38092361	+	transcript2218.chr20.nnic@RPRD1B	transcript2218.chr20.nnic	protein_coding	38033765,38040435,38048348,38057532,38059394,38066081,38089726,38091132	38034098,38040564,38048481,38057644,38059520,38066256,38091080,38092361	Gene ID= ENSG00000101413.11 TPM= 2.34 Transcript Type= NA
chr20	38033546	38092366	38033546	38092366	+	ENST00000373433.8@RPRD1B	ENST00000373433.8	protein_coding	38033546,38040435,38048348,38057532,38059394,38066081,38089726	38034098,38040564,38048481,38057644,38059520,38066256,38092366	Gene ID= ENSG00000101413.11 TPM= 37.36 Transcript Type= protein_coding
chr20	38127387	38165372	38127387	38165372	-	ENST00000361475.6@TGM2	ENST00000361475.6	protein_coding	38165189,38161420,38155847,38150939,38147961,38146717,38142064,38141282,38139412,38138113,38132340,38131093,38127387	38165372,38161599,38156089,38151057,38148089,38146894,38142199,38141385,38139654,38138385,38132500,38131229,38130369	Gene ID= ENSG00000198959.11 TPM= 130.95 Transcript Type= protein_coding
chr20	38137950	38165282	38137950	38165282	-	ENST00000468262.5@TGM2	ENST00000468262.5	protein_coding	38165189,38161420,38155847,38150939,38147961,38146717,38142064,38141282,38139412,38137950	38165282,38161599,38156089,38151057,38148089,38146894,38142199,38141385,38139654,38138385	Gene ID= ENSG00000198959.11 TPM= 5.23 Transcript Type= retained_intron
chr20	38346356	38377023	38346356	38377023	+	ENST00000217407.2@LBP	ENST00000217407.2	protein_coding	38346356,38349548,38350811,38354284,38355346,38360704,38363975,38364576,38366769,38368995,38370738,38371280,38373072,38373937,38376625	38346640,38349662,38350939,38354439,38355409,38360767,38364066,38364752,38366828,38369162,38370805,38371322,38373135,38374013,38377023	Gene ID= ENSG00000129988.5 TPM= 1.17 Transcript Type= protein_coding
chr20	38412183	38435377	38412183	38435377	-	transcript2242.chr20.nnic@SNHG17	transcript2242.chr20.nnic	processed_transcript	38435027,38434504,38431041,38427680,38426419,38422087,38421006,38419574,38415106,38412183	38435377,38434626,38431112,38427766,38426503,38422241,38421098,38420900,38415228,38413962	Gene ID= ENSG00000196756.11 TPM= 2.34 Transcript Type= NA
chr20	38420592	38435377	38420592	38435377	-	transcript2245.chr20.nnic@SNHG17	transcript2245.chr20.nnic	processed_transcript	38435027,38434504,38431041,38426419,38422087,38421006,38420592	38435377,38434626,38431112,38426503,38422241,38421098,38420900	Gene ID= ENSG00000196756.11 TPM= 2.92 Transcript Type= NA
chr20	38420592	38435377	38420592	38435377	-	transcript2248.chr20.nic@SNHG17	transcript2248.chr20.nic	processed_transcript	38435027,38434504,38431041,38426419,38421006,38420592	38435377,38434626,38431112,38426503,38421098,38420900	Gene ID= ENSG00000196756.11 TPM= 5.25 Transcript Type= NA
chr20	38446578	38450921	38446578	38450921	+	ENST00000453698.5@SNHG11	ENST00000453698.5	processed_transcript	38446578,38447466,38448662,38450262	38447012,38447623,38448730,38450921	Gene ID= ENSG00000174365.19 TPM= 1.17 Transcript Type= retained_intron
chr20	38446685	38450921	38446685	38450921	+	ENST00000483342.5@SNHG11	ENST00000483342.5	processed_transcript	38446685,38448662,38450336,38450533	38447623,38448730,38450447,38450921	Gene ID= ENSG00000174365.19 TPM= 4.67 Transcript Type= retained_intron
chr20	38446724	38450921	38446724	38450921	+	ENST00000432153.5@SNHG11	ENST00000432153.5	processed_transcript	38446724,38447466,38447930,38448662,38450336,38450533	38447012,38447623,38448093,38448730,38450447,38450921	Gene ID= ENSG00000174365.19 TPM= 2.34 Transcript Type= lincRNA
chr20	38446691	38450921	38446691	38450921	+	ENST00000421599.5@SNHG11	ENST00000421599.5	processed_transcript	38446691,38447466,38448666,38450336,38450533	38447012,38447623,38448730,38450447,38450921	Gene ID= ENSG00000174365.19 TPM= 1.17 Transcript Type= lincRNA
chr20	38446710	38450921	38446710	38450921	+	ENST00000359074.8@SNHG11	ENST00000359074.8	processed_transcript	38446710,38447466,38448662,38450336,38450533	38447012,38447623,38448730,38450447,38450921	Gene ID= ENSG00000174365.19 TPM= 1.17 Transcript Type= lincRNA
chr20	38472816	38578861	38472816	38578861	+	ENST00000262879.10@RALGAPB	ENST00000262879.10	protein_coding	38472816,38488403,38492930,38497353,38499447,38509077,38516192,38517506,38517784,38521497,38524778,38525404,38525895,38531167,38532730,38535074,38539776,38541041,38546243,38548689,38551071,38553867,38558295,38562532,38565359,38567096,38569888,38570769,38574150,38574774	38473069,38488618,38493132,38497516,38499633,38509208,38516370,38517654,38518000,38521698,38524945,38525518,38526042,38531231,38532859,38535207,38539958,38541192,38546430,38548795,38551223,38554076,38558453,38562697,38565478,38567232,38569996,38570847,38574298,38578861	Gene ID= ENSG00000170471.14 TPM= 9.34 Transcript Type= protein_coding
chr20	38472816	38578859	38472816	38578859	+	ENST00000397042.7@RALGAPB	ENST00000397042.7	protein_coding	38472816,38488403,38492930,38497353,38499447,38509077,38516192,38517506,38517784,38521497,38524778,38525404,38525895,38531167,38532730,38535086,38539776,38541041,38546243,38548689,38551071,38553867,38558295,38562532,38565356,38567096,38569888,38570769,38574150,38574774	38473069,38488618,38493132,38497516,38499633,38509208,38516370,38517654,38518000,38521698,38524945,38525518,38526042,38531231,38532859,38535207,38539958,38541192,38546430,38548795,38551223,38554076,38558453,38562697,38565478,38567232,38569996,38570847,38574298,38578859	Gene ID= ENSG00000170471.14 TPM= 5.84 Transcript Type= protein_coding
chr20	38480323	38481968	38480323	38481968	-	transcript2269.chr20.nnic@NA	transcript2269.chr20.nnic	NA	38480323	38481968	Gene ID= novel_gene_chr20_2270 TPM= 3.5 Transcript Type= NA
chr20	38748442	38772520	38748442	38772520	+	ENST00000243903.5@ACTR5	ENST00000243903.5	protein_coding	38748442,38750010,38752131,38754957,38755857,38765402,38766238,38767464,38771559	38748853,38750239,38752300,38755174,38756039,38765518,38766377,38767596,38772520	Gene ID= ENSG00000101442.9 TPM= 21.02 Transcript Type= protein_coding
chr20	38748457	38772191	38748457	38772191	+	transcript2276.chr20.nic@ACTR5	transcript2276.chr20.nic	protein_coding	38748457,38750010,38752131,38754957,38755857,38765402,38767464,38771559	38748853,38750239,38752300,38755174,38756039,38766377,38767596,38772191	Gene ID= ENSG00000101442.9 TPM= 4.67 Transcript Type= NA
chr20	38805705	38923024	38805705	38923024	+	ENST00000299824.5@PPP1R16B	ENST00000299824.5	protein_coding	38805705,38835825,38889595,38895565,38900581,38902668,38905969,38906979,38907806,38908028,38918157	38805792,38836175,38889665,38895710,38900684,38902792,38906094,38907054,38907935,38908193,38923024	Gene ID= ENSG00000101445.9 TPM= 56.04 Transcript Type= protein_coding
chr20	38926312	38953106	38926312	38953106	+	ENST00000619304.4@FAM83D	ENST00000619304.4	protein_coding	38926312,38941959,38947876,38951539	38926925,38942126,38948000,38953106	Gene ID= ENSG00000101447.14 TPM= 5.84 Transcript Type= protein_coding
chr20	38962335	39039723	38962335	39039723	+	ENST00000252011.7@DHX35	ENST00000252011.7	protein_coding	38962335,38969081,38972559,38983699,38988813,38991454,38992356,38994821,39001730,39002772,39003749,39006146,39010280,39014880,39018804,39021841,39023690,39025230,39028418,39030704,39034206,39038499	38962407,38969214,38972651,38983776,38988917,38991515,38992425,38994880,39001842,39002868,39003907,39006356,39010404,39014934,39018899,39021935,39023767,39025359,39028499,39030775,39034317,39039723	Gene ID= ENSG00000101452.14 TPM= 9.14 Transcript Type= protein_coding
chr20	38962339	39039721	38962339	39039721	+	transcript2290.chr20.nnic@DHX35	transcript2290.chr20.nnic	protein_coding	38962339,38969081,38972559,38983699,38988813,38991454,38992356,38994821,39001730,39002772,39003749,39006146,39010280,39014880,39018804,39021841,39023690,39028418,39030704,39034206,39038499	38962407,38969214,38972651,38983776,38988917,38991515,38992425,38994880,39001842,39002868,39003907,39006356,39010404,39014934,39018899,39021935,39023767,39028499,39030775,39034317,39039721	Gene ID= ENSG00000101452.14 TPM= 3.3 Transcript Type= NA
chr20	38962360	39039721	38962360	39039721	+	ENST00000484417.5@DHX35	ENST00000484417.5	protein_coding	38962360,38969081,38972559,38983699,38988793,38991454,38992356,38994821,39001730,39002772,39003749,39006146,39010280,39014880,39018804,39021841,39023690,39025230,39028418,39030704,39034206,39038499	38962407,38969214,38972651,38983776,38988917,38991515,38992425,38994880,39001842,39002868,39003907,39006356,39010404,39014934,39018899,39021935,39023767,39025359,39028499,39030775,39034317,39039721	Gene ID= ENSG00000101452.14 TPM= 2.72 Transcript Type= nonsense_mediated_decay
chr20	38989267	38991859	38989267	38991859	-	transcript2296.chr20.nnic@NA	transcript2296.chr20.nnic	NA	38989267	38991859	Gene ID= novel_gene_chr20_2297 TPM= 2.34 Transcript Type= NA
chr20	40685848	40689240	40685848	40689240	-	ENST00000373313.2@MAFB	ENST00000373313.2	protein_coding	40685848	40689240	Gene ID= ENSG00000204103.3 TPM= 43.2 Transcript Type= protein_coding
chr20	41028818	41124487	41028818	41124487	+	ENST00000361337.2@TOP1	ENST00000361337.2	protein_coding	41028818,41029431,41061394,41076171,41077582,41080085,41081165,41084462,41092472,41097220,41098215,41100056,41101209,41112782,41113970,41115371,41116278,41118169,41121696,41122006,41123195	41029100,41029455,41061490,41076294,41077637,41080180,41081240,41084568,41092587,41097341,41098337,41100243,41101353,41112925,41114155,41115439,41116392,41118296,41121790,41122155,41124487	Gene ID= ENSG00000198900.5 TPM= 67.72 Transcript Type= protein_coding
chr20	41030477	41032240	41030477	41032240	-	transcript2315.chr20.nnic@NA	transcript2315.chr20.nnic	NA	41030477	41032240	Gene ID= novel_gene_chr20_2316 TPM= 3.5 Transcript Type= NA
chr20	41077950	41083846	41077950	41083846	-	transcript2313.chr20.nnic@NA	transcript2313.chr20.nnic	NA	41077950	41083846	Gene ID= novel_gene_chr20_2314 TPM= 45.54 Transcript Type= NA
chr20	41136960	41175721	41136960	41175721	+	ENST00000244007.7@PLCG1	ENST00000244007.7	protein_coding	41136960,41137521,41159606,41159870,41160106,41162452,41162642,41162958,41163203,41163378,41163715,41163921,41164081,41164933,41165245,41165450,41165639,41166194,41166476,41166679,41167852,41168767,41169079,41169457,41170112,41172193,41172421,41172729,41173420,41173652,41173923,41174124,41174467	41137035,41137858,41159758,41159963,41160153,41162536,41162725,41162992,41163275,41163479,41163833,41164006,41164201,41165101,41165367,41165551,41165826,41166394,41166595,41166859,41167929,41168870,41169175,41169526,41170269,41172289,41172645,41172877,41173534,41173813,41174011,41174311,41175721	Gene ID= ENSG00000124181.14 TPM= 5.84 Transcript Type= protein_coding
chr20	41137507	41175721	41137507	41175721	+	transcript2318.chr20.nic@PLCG1	transcript2318.chr20.nic	protein_coding	41137507,41159606,41159870,41160106,41162452,41162642,41162958,41163203,41163378,41163715,41163921,41164081,41164933,41165245,41165450,41165639,41166194,41166476,41166679,41167852,41168767,41169079,41169457,41170112,41172193,41172421,41172729,41173420,41173652,41173923,41174124,41174467	41137858,41159758,41159963,41160153,41162536,41162725,41162992,41163275,41163479,41163833,41164006,41164201,41165101,41165367,41165551,41165826,41166394,41166595,41166859,41167929,41168870,41169175,41169526,41170269,41172289,41172645,41172877,41173534,41173813,41174011,41174311,41175721	Gene ID= ENSG00000124181.14 TPM= 8.17 Transcript Type= NA
chr20	41184830	41317731	41184830	41317731	-	transcript2324.chr20.nic@ZHX3	transcript2324.chr20.nic	protein_coding	41317509,41268990,41202057,41201286,41184830	41317731,41269083,41205066,41201384,41185201	Gene ID= ENSG00000174306.21 TPM= 5.84 Transcript Type= NA
chr20	41190544	41193947	41190544	41193947	-	transcript2331.chr20.nnic@NA	transcript2331.chr20.nnic	NA	41190544	41193947	Gene ID= novel_gene_chr20_2332 TPM= 2.34 Transcript Type= NA
chr20	41402101	41618494	41402101	41618494	-	ENST00000373233.7@CHD6	ENST00000373233.7	protein_coding	41618340,41551305,41533050,41514805,41512846,41499295,41498168,41497384,41493858,41493538,41491698,41489778,41488428,41487665,41484352,41483309,41473322,41457264,41455800,41454626,41452740,41451826,41450946,41447882,41445665,41440000,41437274,41426093,41425178,41423492,41420508,41417198,41416588,41415186,41413324,41412144,41402101	41618494,41551360,41533570,41514952,41512995,41499357,41498226,41497501,41493944,41493672,41491819,41490021,41488604,41487808,41484607,41483519,41473517,41457428,41455979,41454736,41452942,41452025,41451105,41447971,41445768,41440129,41437334,41426153,41425394,41423700,41422079,41417349,41416794,41415638,41413515,41412263,41405489	Gene ID= ENSG00000124177.14 TPM= 10.51 Transcript Type= protein_coding
chr20	43590927	43647222	43590927	43647222	+	transcript2353.chr20.nic@IFT52	transcript2353.chr20.nic	protein_coding	43590927,43594693,43596435,43603760,43604183,43605002,43613850,43618243,43618940,43620857,43623891,43635926,43637145,43642479,43646936	43591029,43594817,43596522,43603889,43604258,43605073,43613976,43618353,43619026,43620925,43624045,43636013,43637253,43642624,43647222	Gene ID= ENSG00000101052.12 TPM= 2.34 Transcript Type= NA
chr20	43590931	43647296	43590931	43647296	+	ENST00000373030.7@IFT52	ENST00000373030.7	protein_coding	43590931,43594693,43596435,43603760,43604183,43605002,43613850,43618940,43620857,43623891,43635926,43637145,43642479,43646936	43591054,43594817,43596522,43603889,43604258,43605073,43613976,43619026,43620925,43624045,43636013,43637253,43642624,43647296	Gene ID= ENSG00000101052.12 TPM= 14.01 Transcript Type= protein_coding
chr20	43590990	43647222	43590990	43647222	+	ENST00000373039.4@IFT52	ENST00000373039.4	protein_coding	43590990,43594693,43596435,43603760,43604183,43605002,43613850,43618940,43620857,43623891,43635926,43637145,43642479,43646936	43591029,43594817,43596522,43603889,43604258,43605073,43613976,43619026,43620925,43624045,43636013,43637253,43642624,43647222	Gene ID= ENSG00000101052.12 TPM= 23.35 Transcript Type= protein_coding
chr20	43667157	43716496	43667157	43716496	+	ENST00000217026.4@MYBL2	ENST00000217026.4	protein_coding	43667157,43673806,43681784,43682794,43686852,43692157,43699757,43702490,43705219,43709963,43711488,43713002,43715134,43715959	43667303,43673899,43681855,43682886,43687072,43692319,43700044,43702903,43705358,43710062,43711601,43713106,43715283,43716496	Gene ID= ENSG00000101057.15 TPM= 1.17 Transcript Type= protein_coding
chr20	44111695	44187578	44111695	44187578	-	ENST00000372980.3@JPH2	ENST00000372980.3	protein_coding	44186327,44159618,44118505,44115665,44114782,44111695	44187578,44160407,44118623,44116386,44114876,44113503	Gene ID= ENSG00000149596.6 TPM= 31.53 Transcript Type= protein_coding
chr20	44168332	44172260	44168332	44172260	-	transcript2371.chr20.nnic@NA	transcript2371.chr20.nnic	NA	44168332	44172260	Gene ID= novel_gene_chr20_2372 TPM= 2.34 Transcript Type= NA
chr20	44196496	44210791	44196496	44210791	-	ENST00000255174.2@OSER1	ENST00000255174.2	protein_coding	44210696,44206881,44202961,44196496	44210791,44206998,44203074,44197739	Gene ID= ENSG00000132823.10 TPM= 26.85 Transcript Type= protein_coding
chr20	44302840	44311226	44302840	44311226	-	transcript2383.chr20.nnic@FITM2	transcript2383.chr20.nnic	protein_coding	44310976,44306158,44302840	44311226,44307240,44305583	Gene ID= ENSG00000197296.5 TPM= 7.01 Transcript Type= NA
chr20	44302848	44311226	44302848	44311226	-	transcript2387.chr20.nnic@FITM2	transcript2387.chr20.nnic	protein_coding	44310976,44306251,44302848	44311226,44307240,44305580	Gene ID= ENSG00000197296.5 TPM= 2.34 Transcript Type= NA
chr20	44475886	44494603	44475886	44494603	+	ENST00000262605.8@TTPAL	ENST00000262605.8	protein_coding	44475886,44479985,44484337,44486596,44489263	44475991,44480444,44484530,44486706,44494603	Gene ID= ENSG00000124120.10 TPM= 1.17 Transcript Type= protein_coding
chr20	44497431	44522109	44497431	44522109	-	ENST00000342374.4@SERINC3	ENST00000342374.4	protein_coding	44521913,44513879,44512801,44511289,44509891,44506827,44504801,44503815,44501073,44497431	44522109,44514040,44512994,44511368,44510028,44506996,44504891,44503995,44501300,44500434	Gene ID= ENSG00000132824.13 TPM= 255.7 Transcript Type= protein_coding
chr20	44496224	44522085	44496224	44522085	-	ENST00000255175.5@SERINC3	ENST00000255175.5	protein_coding	44521913,44513879,44512801,44511289,44509891,44506827,44504801,44503815,44501073,44500258,44496224	44522085,44514040,44512994,44511368,44510028,44506996,44504891,44503995,44501300,44500434,44496355	Gene ID= ENSG00000132824.13 TPM= 3.5 Transcript Type= protein_coding
chr20	44531785	44619037	44531785	44619037	+	ENST00000372891.7@PKIG	ENST00000372891.7	protein_coding	44531785,44582585,44585100,44589797,44614534,44618285	44531978,44582731,44585204,44589866,44614707,44619037	Gene ID= ENSG00000168734.13 TPM= 4.67 Transcript Type= protein_coding
chr20	44531785	44619037	44531785	44619037	+	ENST00000372892.7@PKIG	ENST00000372892.7	protein_coding	44531785,44582585,44589797,44614534,44618285	44531978,44582731,44589866,44614707,44619037	Gene ID= ENSG00000168734.13 TPM= 32.11 Transcript Type= protein_coding
chr20	44531785	44619037	44531785	44619037	+	ENST00000372894.7@PKIG	ENST00000372894.7	protein_coding	44531785,44589797,44614534,44618285	44531978,44589866,44614707,44619037	Gene ID= ENSG00000168734.13 TPM= 39.7 Transcript Type= protein_coding
chr20	44582549	44619037	44582549	44619037	+	ENST00000372886.5@PKIG	ENST00000372886.5	protein_coding	44582549,44589797,44614534,44618285	44582731,44589866,44614707,44619037	Gene ID= ENSG00000168734.13 TPM= 36.78 Transcript Type= protein_coding
chr20	44619522	44651742	44619522	44651742	-	ENST00000372874.8@ADA	ENST00000372874.8	protein_coding	44651575,44636227,44629047,44626456,44625569,44624202,44623007,44622829,44622588,44621018,44620299,44619522	44651742,44636288,44629169,44626599,44625684,44624329,44623078,44622930,44622652,44621147,44620401,44619847	Gene ID= ENSG00000196839.12 TPM= 18.68 Transcript Type= protein_coding
chr20	44714283	44727811	44714283	44727811	+	transcript2430.chr20.nnic@WISP2	transcript2430.chr20.nnic	protein_coding	44714283,44715366,44719897,44724738,44727087	44714373,44715450,44720113,44724992,44727811	Gene ID= ENSG00000064205.10 TPM= 53.13 Transcript Type= NA
chr20	44714844	44727811	44714844	44727811	+	ENST00000372868.6@WISP2	ENST00000372868.6	protein_coding	44714844,44715366,44719897,44724738,44727087	44715161,44715450,44720113,44724992,44727811	Gene ID= ENSG00000064205.10 TPM= 57.8 Transcript Type= protein_coding
chr20	44728156	44730914	44728156	44730914	-	transcript2443.chr20.nnic@NA	transcript2443.chr20.nnic	NA	44728156	44730914	Gene ID= novel_gene_chr20_2444 TPM= 3.5 Transcript Type= NA
chr20	44745780	44752313	44745780	44752313	+	ENST00000372861.4@KCNK15	ENST00000372861.4	protein_coding	44745780,44750129	44746193,44752313	Gene ID= ENSG00000124249.6 TPM= 4.67 Transcript Type= protein_coding
chr20	44885676	44908532	44885676	44908532	+	ENST00000353703.8@YWHAB	ENST00000353703.8	protein_coding	44885676,44901531,44903993,44904968,44906001,44906382	44885886,44901833,44904116,44905131,44906096,44908532	Gene ID= ENSG00000166913.12 TPM= 172.22 Transcript Type= protein_coding
chr20	44885711	44908532	44885711	44908532	+	ENST00000372839.7@YWHAB	ENST00000372839.7	protein_coding	44885711,44887648,44901531,44903993,44904968,44906001,44906382	44885886,44887742,44901833,44904116,44905131,44906096,44908532	Gene ID= ENSG00000166913.12 TPM= 32.11 Transcript Type= protein_coding
chr20	44885702	44906520	44885702	44906520	+	ENST00000479421.5@YWHAB	ENST00000479421.5	protein_coding	44885702,44901531,44903036,44903993,44904968,44906001,44906382	44885886,44901833,44903121,44904116,44905131,44906096,44906520	Gene ID= ENSG00000166913.12 TPM= 8.17 Transcript Type= nonsense_mediated_decay
chr20	44910124	44939313	44910124	44939313	+	ENST00000537323.5@PABPC1L	ENST00000537323.5	protein_coding	44910124,44912660,44916756,44918906,44919183,44921594,44924161,44930518,44933072,44935391,44936637,44938061,44938674,44939126	44910336,44912853,44916871,44919045,44919277,44921731,44924256,44930726,44933185,44935497,44936730,44938191,44938748,44939313	Gene ID= ENSG00000101104.12 TPM= 3.5 Transcript Type= protein_coding
chr20	44942130	44960486	44942130	44960486	-	ENST00000372813.3@TOMM34	ENST00000372813.3	protein_coding	44960207,44956386,44955068,44951833,44948730,44943453,44942130	44960486,44956485,44955220,44952002,44948877,44943579,44943213	Gene ID= ENSG00000025772.7 TPM= 4.67 Transcript Type= protein_coding
chr20	44942217	44960376	44942217	44960376	-	transcript2488.chr20.nnic@TOMM34	transcript2488.chr20.nnic	protein_coding	44960207,44956386,44955068,44951833,44943453,44942217	44960376,44956485,44955220,44952002,44943579,44943213	Gene ID= ENSG00000025772.7 TPM= 2.34 Transcript Type= NA
chr20	44966474	45079959	44966474	45079959	+	ENST00000372806.7@STK4	ENST00000372806.7	protein_coding	44966474,44972078,44978443,44981829,44987132,44995090,44997169,45000392,45001167,45024973,45075018	44966603,44972158,44978571,44981943,44987296,44995257,44997306,45000520,45001353,45025130,45079959	Gene ID= ENSG00000101109.11 TPM= 25.69 Transcript Type= protein_coding
chr20	44966501	45027450	44966501	45027450	+	transcript2495.chr20.nic@STK4	transcript2495.chr20.nic	protein_coding	44966501,44972078,44978443,44981829,44987132,44995090,44997169,45000392,45001167,45024973	44966603,44972158,44978571,44981943,44987296,44995257,44997306,45000520,45001353,45027450	Gene ID= ENSG00000101109.11 TPM= 2.34 Transcript Type= NA
chr20	44966515	44972920	44966515	44972920	+	ENST00000488618.1@STK4	ENST00000488618.1	protein_coding	44966515,44972078	44966603,44972920	Gene ID= ENSG00000101109.11 TPM= 1.17 Transcript Type= processed_transcript
chr20	44966553	44975684	44966553	44975684	+	ENST00000487587.2@STK4	ENST00000487587.2	protein_coding	44966553,44972078,44973301,44974100	44966603,44972158,44973433,44975684	Gene ID= ENSG00000101109.11 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr20	45174876	45176544	45174876	45176544	+	ENST00000243924.3@PI3	ENST00000243924.3	protein_coding	45174876,45175861,45176370	45175001,45176136,45176544	Gene ID= ENSG00000124102.4 TPM= 1.17 Transcript Type= protein_coding
chr20	45252239	45254564	45252239	45254564	-	ENST00000338380.2@SLPI	ENST00000338380.2	protein_coding	45254459,45253575,45253002,45252239	45254564,45253733,45253151,45252419	Gene ID= ENSG00000124107.5 TPM= 147.12 Transcript Type= protein_coding
chr20	45325288	45348428	45325288	45348428	-	transcript2512.chr20.nnic@SDC4	transcript2512.chr20.nnic	protein_coding	45348325,45335782,45333023,45330366,45326808,45325288	45348428,45335920,45333069,45330564,45327415,45325488	Gene ID= ENSG00000124145.6 TPM= 10.51 Transcript Type= NA
chr20	45325288	45348428	45325288	45348428	-	transcript2513.chr20.nnic@SDC4	transcript2513.chr20.nnic	protein_coding	45348325,45335782,45333023,45330366,45326868,45325288	45348428,45335920,45333069,45330564,45327415,45326362	Gene ID= ENSG00000124145.6 TPM= 59.55 Transcript Type= NA
chr20	45325288	45348424	45325288	45348424	-	ENST00000372733.3@SDC4	ENST00000372733.3	protein_coding	45348325,45335782,45333023,45330366,45325288	45348424,45335920,45333069,45330564,45327415	Gene ID= ENSG00000124145.6 TPM= 370.13 Transcript Type= protein_coding
chr20	45363028	45369215	45363028	45369215	+	ENST00000243918.9@SYS1	ENST00000243918.9	protein_coding	45363028,45363529,45365619,45366875	45363315,45363693,45365686,45369215	Gene ID= ENSG00000204070.9 TPM= 53.71 Transcript Type= protein_coding
chr20	45363139	45376798	45363139	45376798	+	ENST00000426004.5@SYS1	ENST00000426004.5	protein_coding	45363139,45363529,45365619,45374294	45363315,45363693,45365686,45376798	Gene ID= ENSG00000204070.9 TPM= 1.17 Transcript Type= protein_coding
chr20	45406619	45410610	45406619	45410610	+	ENST00000360981.8@DBNDD2	ENST00000360981.8	protein_coding	45406619,45408460,45408801,45409932	45406732,45408606,45408938,45410610	Gene ID= ENSG00000244274.7 TPM= 89.52 Transcript Type= protein_coding
chr20	45406057	45410610	45406057	45410610	+	ENST00000372723.7@DBNDD2	ENST00000372723.7	protein_coding	45406057,45408460,45408801,45409932	45406210,45408606,45408938,45410610	Gene ID= ENSG00000244274.7 TPM= 12.46 Transcript Type= protein_coding
chr20	45406588	45410610	45406588	45410610	+	ENST00000372717.5@DBNDD2	ENST00000372717.5	protein_coding	45406588,45408460,45408801,45409932	45406732,45408606,45409036,45410610	Gene ID= ENSG00000244274.7 TPM= 4.67 Transcript Type= protein_coding
chr20	45416067	45426244	45416067	45426244	+	ENST00000279036.11@PIGT	ENST00000279036.11	protein_coding	45416067,45416517,45418852,45419295,45419504,45420136,45420332,45420528,45421383,45424216,45424496,45425574	45416343,45416694,45418979,45419395,45419590,45420223,45420429,45420693,45421583,45424381,45424579,45426244	Gene ID= ENSG00000124155.17 TPM= 83.39 Transcript Type= protein_coding
chr20	45416107	45426244	45416107	45426244	+	ENST00000543458.7@PIGT	ENST00000543458.7	protein_coding	45416107,45416517,45419295,45419504,45420136,45420332,45420528,45421383,45424216,45424496,45425574	45416343,45416654,45419395,45419590,45420223,45420429,45420693,45421583,45424381,45424579,45426244	Gene ID= ENSG00000124155.17 TPM= 11.77 Transcript Type= protein_coding
chr20	45416084	45426202	45416084	45426202	+	ENST00000279035.14@PIGT	ENST00000279035.14	protein_coding	45416084,45419295,45419504,45420136,45420332,45420528,45421383,45424216,45424496,45425574	45416343,45419395,45419590,45420223,45420429,45420693,45421583,45424381,45424579,45426202	Gene ID= ENSG00000124155.17 TPM= 2.72 Transcript Type= protein_coding
chr20	45416137	45426241	45416137	45426241	+	ENST00000372689.9@PIGT	ENST00000372689.9	protein_coding	45416137,45416517,45418852,45419295,45419504,45420136,45420332,45420528,45424216,45424496,45425574	45416343,45416694,45418979,45419395,45419590,45420223,45420429,45420693,45424381,45424579,45426241	Gene ID= ENSG00000124155.17 TPM= 3.41 Transcript Type= protein_coding
chr20	45416141	45426240	45416141	45426240	+	ENST00000640986.1@PIGT	ENST00000640986.1	protein_coding	45416141,45416517,45418852,45419295,45419504,45420136,45420332,45420508,45421383,45424216,45424496,45425574	45416343,45416694,45418979,45419395,45419590,45420223,45420429,45420693,45421583,45424381,45424579,45426240	Gene ID= ENSG00000124155.17 TPM= 3.79 Transcript Type= nonsense_mediated_decay
chr20	45469706	45481532	45469706	45481532	+	ENST00000372676.7@WFDC2	ENST00000372676.7	protein_coding	45469706,45470389,45479942,45481371	45469860,45470532,45480094,45481532	Gene ID= ENSG00000101443.17 TPM= 21.02 Transcript Type= protein_coding
chr20	45791937	45811427	45791937	45811427	+	ENST00000372622.7@DNTTIP1	ENST00000372622.7	protein_coding	45791937,45792677,45793921,45795345,45801074,45801402,45801999,45803333,45805146,45805306,45809114,45810885,45811057	45792109,45792747,45794017,45795443,45801142,45801458,45802057,45803378,45805204,45805366,45809185,45810940,45811427	Gene ID= ENSG00000101457.12 TPM= 64.22 Transcript Type= protein_coding
chr20	45812576	45816957	45812576	45816957	+	ENST00000356455.8@UBE2C	ENST00000356455.8	protein_coding	45812576,45813437,45814384,45815541,45815854,45816709	45812796,45813464,45814470,45815745,45815913,45816957	Gene ID= ENSG00000175063.16 TPM= 4.67 Transcript Type= protein_coding
chr20	45833807	45841724	45833807	45841724	+	transcript2588.chr20.nic@SNX21	transcript2588.chr20.nic	protein_coding	45833807,45834201,45834959,45840639	45833940,45834468,45835109,45841724	Gene ID= ENSG00000124104.18 TPM= 4.09 Transcript Type= NA
chr20	45833852	45841730	45833852	45841730	+	ENST00000491381.5@SNX21	ENST00000491381.5	protein_coding	45833852,45834201,45834959,45840639	45833940,45834468,45835116,45841730	Gene ID= ENSG00000124104.18 TPM= 5.25 Transcript Type= protein_coding
chr20	45839948	45842879	45839948	45842879	+	transcript2597.chr20.nnic@NA	transcript2597.chr20.nnic	NA	45839948	45842879	Gene ID= novel_gene_chr20_2598 TPM= 5.84 Transcript Type= NA
chr20	45841721	45857435	45841721	45857435	-	transcript2581.chr20.nic@ACOT8	transcript2581.chr20.nic	protein_coding	45857188,45855159,45848450,45844263,45843527,45841721	45857435,45855292,45848675,45844420,45843721,45843398	Gene ID= ENSG00000101473.16 TPM= 2.34 Transcript Type= NA
chr20	45841721	45857406	45841721	45857406	-	ENST00000217455.8@ACOT8	ENST00000217455.8	protein_coding	45857188,45855159,45848450,45844263,45843527,45841721	45857406,45855292,45848675,45844420,45843721,45841956	Gene ID= ENSG00000101473.16 TPM= 31.53 Transcript Type= protein_coding
chr20	45841738	45857402	45841738	45857402	-	ENST00000488679.5@ACOT8	ENST00000488679.5	protein_coding	45857188,45848450,45844263,45843527,45841738	45857402,45848675,45844420,45843721,45841956	Gene ID= ENSG00000101473.16 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr20	45841726	45857389	45841726	45857389	-	ENST00000461272.5@ACOT8	ENST00000461272.5	protein_coding	45857188,45855159,45848450,45844263,45843527,45841726	45857389,45855292,45848675,45844420,45843772,45841956	Gene ID= ENSG00000101473.16 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr20	45857617	45879122	45857617	45879122	+	ENST00000255152.2@ZSWIM3	ENST00000255152.2	protein_coding	45857617,45876714	45857980,45879122	Gene ID= ENSG00000132801.6 TPM= 5.84 Transcript Type= protein_coding
chr20	45881241	45885265	45881241	45885265	+	ENST00000372520.1@ZSWIM1	ENST00000372520.1	protein_coding	45881241,45882533,45884985	45881261,45884398,45885265	Gene ID= ENSG00000168612.4 TPM= 1.17 Transcript Type= protein_coding
chr20	45891044	45898820	45891044	45898820	+	ENST00000372484.7@CTSA	ENST00000372484.7	protein_coding	45891044,45891569,45891916,45892273,45892398,45892725,45893220,45893988,45894650,45894823,45894994,45896965,45897717,45898005,45898367	45891379,45891762,45892027,45892323,45892484,45892880,45893311,45894072,45894741,45894901,45895133,45897040,45897806,45898109,45898820	Gene ID= ENSG00000064601.16 TPM= 252 Transcript Type= protein_coding
chr20	45891341	45898820	45891341	45898820	+	ENST00000191018.9@CTSA	ENST00000191018.9	protein_coding	45891341,45891569,45891916,45892273,45892398,45892725,45893220,45893988,45894650,45894823,45894994,45896965,45897717,45898005,45898367	45891425,45891762,45892027,45892323,45892484,45892880,45893311,45894072,45894741,45894901,45895133,45897040,45897806,45898109,45898820	Gene ID= ENSG00000064601.16 TPM= 57.01 Transcript Type= protein_coding
chr20	45891322	45898820	45891322	45898820	+	ENST00000354880.9@CTSA	ENST00000354880.9	protein_coding	45891322,45891569,45891916,45892398,45892725,45893220,45893988,45894650,45894823,45894994,45896965,45897717,45898005,45898367	45891379,45891762,45892027,45892484,45892880,45893311,45894072,45894741,45894901,45895133,45897040,45897806,45898109,45898820	Gene ID= ENSG00000064601.16 TPM= 31.14 Transcript Type= protein_coding
chr20	45891376	45898786	45891376	45898786	+	ENST00000372459.6@CTSA	ENST00000372459.6	protein_coding	45891376,45891916,45892273,45892398,45892725,45893220,45893988,45894650,45894823,45894994,45896965,45897717,45898005,45898367	45891762,45892027,45892323,45892484,45892880,45893311,45894072,45894741,45894901,45895133,45897040,45897806,45898109,45898786	Gene ID= ENSG00000064601.16 TPM= 4.29 Transcript Type= protein_coding
chr20	45898621	45912152	45898621	45912152	-	ENST00000354050.8@PLTP	ENST00000354050.8	protein_coding	45912079,45911353,45911152,45909942,45907841,45907692,45906268,45904942,45904800,45902440,45902267,45899836,45899622,45899462,45898621	45912152,45911463,45911251,45910070,45907904,45907755,45906359,45905118,45904859,45902604,45902334,45899878,45899685,45899538,45899063	Gene ID= ENSG00000100979.14 TPM= 2.34 Transcript Type= protein_coding
chr20	45898760	45912147	45898760	45912147	-	ENST00000372431.7@PLTP	ENST00000372431.7	protein_coding	45912079,45911353,45911152,45909942,45909516,45907841,45907692,45906268,45904942,45904800,45902440,45902267,45899836,45899622,45899462,45898760	45912147,45911463,45911251,45910070,45909671,45907904,45907755,45906359,45905118,45904859,45902604,45902334,45899878,45899685,45899538,45899063	Gene ID= ENSG00000100979.14 TPM= 112.09 Transcript Type= protein_coding
chr20	45898806	45912155	45898806	45912155	-	ENST00000420868.2@PLTP	ENST00000420868.2	protein_coding	45912079,45911353,45911152,45907841,45907692,45906268,45904942,45904800,45902440,45902267,45899836,45899622,45899462,45898806	45912155,45911463,45911251,45907904,45907755,45906359,45905118,45904859,45902604,45902334,45899878,45899685,45899538,45899063	Gene ID= ENSG00000100979.14 TPM= 1.17 Transcript Type= protein_coding
chr20	45898760	45910937	45898760	45910937	-	ENST00000372420.5@PLTP	ENST00000372420.5	protein_coding	45910871,45909942,45909516,45907841,45907692,45906268,45904942,45904800,45902440,45902267,45899836,45899622,45899462,45898760	45910937,45910070,45909671,45907904,45907755,45906359,45905118,45904859,45902604,45902334,45899878,45899685,45899538,45899063	Gene ID= ENSG00000100979.14 TPM= 3.5 Transcript Type= protein_coding
chr20	45934673	45948023	45934673	45948023	+	transcript2634.chr20.nnic@PCIF1	transcript2634.chr20.nnic	protein_coding	45934673,45937418,45938981,45939215,45940475,45940809,45941053,45943097,45943340,45943666,45944245,45944868,45945711,45946029,45946200,45947073,45947263,45947524	45934804,45937585,45939123,45939339,45940612,45940939,45941207,45943244,45943423,45943765,45944320,45945030,45945883,45946115,45946384,45947166,45947438,45948023	Gene ID= ENSG00000100982.11 TPM= 5.25 Transcript Type= NA
chr20	45934628	45948023	45934628	45948023	+	ENST00000372409.7@PCIF1	ENST00000372409.7	protein_coding	45934628,45937418,45938981,45939215,45940475,45940809,45941053,45943097,45943340,45943666,45944868,45945711,45946029,45946200,45947073,45947263,45947524	45934804,45937585,45939123,45939339,45940612,45940939,45941207,45943244,45943423,45943765,45945030,45945883,45946115,45946384,45947166,45947438,45948023	Gene ID= ENSG00000100982.11 TPM= 98.46 Transcript Type= protein_coding
chr20	45934673	45948023	45934673	45948023	+	transcript2645.chr20.nic@PCIF1	transcript2645.chr20.nic	protein_coding	45934673,45937418,45938981,45939215,45940475,45940809,45941053,45943097,45943340,45943666,45944868,45945711,45946029,45946200,45947073,45947263	45934804,45937585,45939123,45939339,45940612,45940939,45941207,45943244,45943423,45943765,45945030,45945883,45946115,45946384,45947166,45948023	Gene ID= ENSG00000100982.11 TPM= 7.39 Transcript Type= NA
chr20	45934733	45937972	45934733	45937972	+	ENST00000616084.1@PCIF1	ENST00000616084.1	protein_coding	45934733,45937418	45934804,45937972	Gene ID= ENSG00000100982.11 TPM= 1.17 Transcript Type= processed_transcript
chr20	45948653	45971847	45948653	45971847	-	transcript2630.chr20.nic@ZNF335	transcript2630.chr20.nic	protein_coding	45971210,45969451,45968285,45967734,45967494,45965628,45963738,45963473,45962070,45960864,45960616,45960449,45960208,45959201,45957835,45957586,45953689,45952598,45952147,45950453,45950219,45949966,45949800,45949485,45949333,45949170,45948653	45971847,45969691,45968362,45968027,45967634,45965774,45963990,45963650,45962182,45960882,45960732,45960525,45960368,45959433,45957928,45957680,45953948,45952709,45952521,45950595,45950373,45950069,45949877,45949568,45949398,45949251,45949080	Gene ID= ENSG00000198026.7 TPM= 2.34 Transcript Type= NA
chr20	45948653	45972172	45948653	45972172	-	ENST00000322927.2@ZNF335	ENST00000322927.2	protein_coding	45972122,45971210,45969451,45968285,45967734,45967494,45965628,45963738,45963473,45962070,45960864,45960616,45960449,45960208,45959201,45957835,45957586,45953689,45952598,45952147,45950453,45950219,45949966,45949800,45949485,45949333,45949170,45948653	45972172,45971460,45969691,45968362,45968027,45967634,45965774,45963990,45963650,45962182,45960882,45960732,45960525,45960368,45959433,45957928,45957680,45953948,45952709,45952521,45950595,45950373,45950069,45949877,45949568,45949398,45949251,45949080	Gene ID= ENSG00000198026.7 TPM= 23.35 Transcript Type= protein_coding
chr20	45966860	45971777	45966860	45971777	-	transcript2664.chr20.nnic@NA	transcript2664.chr20.nnic	NA	45966860	45971777	Gene ID= novel_gene_chr20_2665 TPM= 3.5 Transcript Type= NA
chr20	46008908	46016561	46008908	46016561	+	ENST00000372330.3@MMP9	ENST00000372330.3	protein_coding	46008908,46009866,46010483,46010922,46011143,46011574,46012137,46012427,46013255,46013657,46014124,46014371,46016250	46009064,46010098,46010631,46011050,46011316,46011747,46012313,46012582,46013534,46013796,46014274,46014474,46016561	Gene ID= ENSG00000100985.7 TPM= 10.51 Transcript Type= protein_coding
chr20	46060991	46089981	46060991	46089981	-	transcript2668.chr20.nnic@NCOA5	transcript2668.chr20.nnic	protein_coding	46089817,46079387,46070210,46068502,46067055,46065029,46063337,46060991	46089981,46079453,46070536,46068638,46067181,46065228,46063680,46062889	Gene ID= ENSG00000124160.11 TPM= 8.17 Transcript Type= NA
chr20	46060985	46089950	46060985	46089950	-	transcript2669.chr20.nic@NCOA5	transcript2669.chr20.nic	protein_coding	46089817,46070210,46068502,46067055,46065029,46063360,46060985	46089950,46070536,46068638,46067181,46065228,46063680,46062889	Gene ID= ENSG00000124160.11 TPM= 4.67 Transcript Type= NA
chr20	46060985	46089952	46060985	46089952	-	ENST00000290231.10@NCOA5	ENST00000290231.10	protein_coding	46089817,46079387,46070210,46068502,46067055,46065029,46063360,46060985	46089952,46079453,46070536,46068638,46067181,46065228,46063680,46062889	Gene ID= ENSG00000124160.11 TPM= 42.03 Transcript Type= protein_coding
chr20	46125774	46129516	46125774	46129516	+	transcript2686.chr20.nic@CD40	transcript2686.chr20.nic	protein_coding	46125774,46128330,46128882	46128224,46128358,46129516	Gene ID= ENSG00000101017.13 TPM= 2.34 Transcript Type= NA
chr20	46118272	46129863	46118272	46129863	+	ENST00000372285.7@CD40	ENST00000372285.7	protein_coding	46118272,46121820,46122233,46122610,46123126,46126640,46128138,46128330,46128882	46118394,46121898,46122358,46122756,46123219,46126701,46128224,46128358,46129863	Gene ID= ENSG00000101017.13 TPM= 2.34 Transcript Type= protein_coding
chr20	46118316	46129863	46118316	46129863	+	ENST00000372276.7@CD40	ENST00000372276.7	protein_coding	46118316,46121820,46122233,46122610,46123126,46128138,46128330,46128882	46118394,46121898,46122358,46122756,46123219,46128224,46128358,46129863	Gene ID= ENSG00000101017.13 TPM= 1.17 Transcript Type= protein_coding
chr20	46349740	46364459	46349740	46364459	-	transcript2693.chr20.nic@SLC35C2	transcript2693.chr20.nic	protein_coding	46364371,46358387,46357623,46356574,46355802,46355073,46354882,46352051,46350761,46349740	46364459,46358763,46357702,46356637,46355874,46355241,46354965,46352226,46350890,46350524	Gene ID= ENSG00000080189.14 TPM= 2.92 Transcript Type= NA
chr20	46349946	46363981	46349946	46363981	-	transcript2702.chr20.nnic@SLC35C2	transcript2702.chr20.nnic	protein_coding	46363900,46358387,46357623,46356574,46355802,46355073,46354882,46352051,46350761,46349946	46363981,46358958,46357773,46356637,46355874,46355241,46354965,46352226,46350890,46350524	Gene ID= ENSG00000080189.14 TPM= 5.25 Transcript Type= NA
chr20	46349528	46364395	46349528	46364395	-	ENST00000372230.9@SLC35C2	ENST00000372230.9	protein_coding	46364371,46358387,46357623,46356574,46355802,46355073,46354882,46352051,46350761,46349528	46364395,46358763,46357773,46356637,46355874,46355241,46354965,46352226,46350890,46350524	Gene ID= ENSG00000080189.14 TPM= 2.34 Transcript Type= protein_coding
chr20	46366050	46406635	46366050	46406635	-	transcript2715.chr20.nic@ELMO2	transcript2715.chr20.nic	protein_coding	46406548,46398697,46394405,46394049,46393529,46393093,46389039,46387338,46386124,46383416,46380253,46375668,46375236,46374536,46374332,46373399,46371806,46371579,46371352,46370443,46368891,46366050	46406635,46398771,46394503,46394089,46393601,46393143,46389220,46387437,46386275,46383494,46380303,46375790,46375370,46374640,46374440,46373535,46371969,46371691,46371459,46370525,46368968,46367560	Gene ID= ENSG00000062598.17 TPM= 20.55 Transcript Type= NA
chr20	46366050	46406635	46366050	46406635	-	transcript2720.chr20.nic@ELMO2	transcript2720.chr20.nic	protein_coding	46406548,46394405,46394049,46393529,46393093,46389039,46387338,46386124,46383416,46380253,46375668,46375236,46374536,46374332,46373399,46371806,46371579,46371352,46370443,46368891,46366050	46406635,46394532,46394089,46393601,46393143,46389220,46387437,46386275,46383494,46380303,46375790,46375370,46374640,46374440,46373535,46371969,46371691,46371459,46370525,46368968,46367560	Gene ID= ENSG00000062598.17 TPM= 28.72 Transcript Type= NA
chr20	46366050	46406655	46366050	46406655	-	transcript2724.chr20.nic@ELMO2	transcript2724.chr20.nic	protein_coding	46406548,46394405,46394049,46393093,46389039,46387338,46386124,46383416,46380253,46375668,46375236,46374536,46374332,46373399,46371806,46371579,46371352,46370443,46368891,46366050	46406655,46394503,46394089,46393143,46389220,46387437,46386275,46383494,46380303,46375790,46375370,46374640,46374440,46373535,46371969,46371691,46371459,46370525,46368968,46367560	Gene ID= ENSG00000062598.17 TPM= 6.12 Transcript Type= NA
chr20	46366049	46406617	46366049	46406617	-	ENST00000290246.10@ELMO2	ENST00000290246.10	protein_coding	46406548,46398697,46394405,46394049,46393529,46393093,46389039,46387338,46386124,46383416,46380253,46375668,46375236,46374536,46374332,46373399,46371806,46371579,46371352,46370443,46368891,46366049	46406617,46398771,46394532,46394089,46393601,46393143,46389220,46387437,46386275,46383494,46380303,46375790,46375370,46374640,46374440,46373535,46371969,46371691,46371459,46370525,46368968,46367560	Gene ID= ENSG00000062598.17 TPM= 68.42 Transcript Type= protein_coding
chr20	46366055	46406632	46366055	46406632	-	ENST00000396391.5@ELMO2	ENST00000396391.5	protein_coding	46406548,46394405,46394049,46393529,46393093,46389039,46387338,46386124,46383416,46380253,46375668,46375236,46374536,46374332,46373399,46371806,46371579,46371352,46370443,46368891,46366055	46406632,46394503,46394089,46393601,46393143,46389220,46387437,46386275,46383494,46380303,46375790,46375370,46374640,46374440,46373535,46371969,46371691,46371459,46370525,46368968,46367560	Gene ID= ENSG00000062598.17 TPM= 44.7 Transcript Type= protein_coding
chr20	46366050	46406559	46366050	46406559	-	ENST00000372176.5@ELMO2	ENST00000372176.5	protein_coding	46406548,46398697,46394405,46393981,46393529,46393093,46389039,46387338,46386124,46383416,46380253,46375668,46375236,46374536,46374332,46373399,46371806,46371579,46371352,46370443,46368891,46366050	46406559,46398771,46394532,46394089,46393601,46393143,46389220,46387437,46386275,46383494,46380303,46375790,46375370,46374640,46374440,46373535,46371969,46371691,46371459,46370525,46368968,46367560	Gene ID= ENSG00000062598.17 TPM= 4.2 Transcript Type= protein_coding
chr20	46684365	46689779	46684365	46689779	-	ENST00000372114.3@TP53RK	ENST00000372114.3	protein_coding	46689132,46684365	46689779,46687231	Gene ID= ENSG00000172315.5 TPM= 11.68 Transcript Type= protein_coding
chr20	46685534	46689440	46685534	46689440	-	ENST00000372102.3@TP53RK	ENST00000372102.3	protein_coding	46689127,46685534	46689440,46687231	Gene ID= ENSG00000172315.5 TPM= 1.17 Transcript Type= protein_coding
chr20	46709487	46736347	46709487	46736347	+	ENST00000359271.3@SLC2A10	ENST00000359271.3	protein_coding	46709487,46725041,46726864,46729353,46733756	46709740,46726324,46726986,46729488,46736347	Gene ID= ENSG00000197496.5 TPM= 36.2 Transcript Type= protein_coding
chr20	46709555	46736347	46709555	46736347	+	transcript2744.chr20.nic@SLC2A10	transcript2744.chr20.nic	protein_coding	46709555,46725041,46729353,46733756	46709740,46726986,46729488,46736347	Gene ID= ENSG00000197496.5 TPM= 4.67 Transcript Type= NA
chr20	46709609	46710436	46709609	46710436	+	transcript2745.chr20.nnic@NA	transcript2745.chr20.nnic	NA	46709609	46710436	Gene ID= novel_gene_chr20_2746 TPM= 8.17 Transcript Type= NA
chr20	47210441	47356699	47210441	47356699	-	ENST00000352431.6@ZMYND8	ENST00000352431.6	protein_coding	47356657,47347856,47310056,47298729,47294666,47291796,47290187,47287229,47283571,47282102,47276314,47262288,47249287,47246008,47238896,47236326,47229726,47227203,47224317,47221314,47220258,47210441	47356699,47347926,47310204,47298947,47294779,47291888,47290274,47287284,47283648,47282217,47276795,47262428,47249439,47246517,47239138,47236516,47229806,47227281,47224556,47221474,47220324,47210897	Gene ID= ENSG00000101040.19 TPM= 10.51 Transcript Type= protein_coding
chr20	47286372	47288468	47286372	47288468	+	transcript2769.chr20.nnic@NA	transcript2769.chr20.nnic	NA	47286372	47288468	Gene ID= novel_gene_chr20_2770 TPM= 2.34 Transcript Type= NA
chr20	47352721	47356344	47352721	47356344	+	transcript2767.chr20.nnic@NA	transcript2767.chr20.nnic	NA	47352721	47356344	Gene ID= novel_gene_chr20_2768 TPM= 12.84 Transcript Type= NA
chr20	47501902	47656877	47501902	47656877	+	ENST00000372004.7@NCOA3	ENST00000372004.7	protein_coding	47501902,47583183,47622229,47623911,47625381,47627002,47627561,47627922,47633496,47634048,47635322,47635891,47637648,47639008,47639577,47639925,47642213,47647073,47649005,47650982,47652406,47652931,47653406	47502019,47583261,47622330,47624083,47625481,47627176,47627749,47628023,47633636,47634195,47635713,47636762,47637783,47639202,47639822,47640051,47642384,47647366,47649097,47651276,47652580,47653072,47656877	Gene ID= ENSG00000124151.18 TPM= 23.35 Transcript Type= protein_coding
chr20	47585928	47588532	47585928	47588532	-	transcript2793.chr20.nnic@NA	transcript2793.chr20.nnic	NA	47585928	47588532	Gene ID= novel_gene_chr20_2794 TPM= 7.01 Transcript Type= NA
chr20	47647888	47649925	47647888	47649925	-	transcript2795.chr20.nnic@NA	transcript2795.chr20.nnic	NA	47647888	47649925	Gene ID= novel_gene_chr20_2796 TPM= 2.34 Transcript Type= NA
chr20	47657406	47786099	47657406	47786099	-	transcript2774.chr20.nic@SULF2	transcript2774.chr20.nic	protein_coding	47785343,47757189,47736703,47702519,47690126,47684431,47682994,47678676,47677078,47676494,47672198,47666260,47665857,47665199,47664130,47663453,47663070,47661773,47659697,47659399,47657406	47786099,47757463,47736942,47702670,47690295,47684581,47683169,47678804,47677134,47676623,47672393,47666488,47665953,47665293,47664189,47663622,47663212,47661896,47659730,47659452,47658392	Gene ID= ENSG00000196562.14 TPM= 22.77 Transcript Type= NA
chr20	47656912	47786586	47656912	47786586	-	ENST00000359930.8@SULF2	ENST00000359930.8	protein_coding	47785835,47757189,47736703,47702519,47690126,47684431,47682994,47678676,47677078,47676494,47672198,47666260,47665857,47665199,47664130,47663453,47663070,47661773,47659697,47659399,47656912	47786586,47757463,47736942,47702670,47690295,47684581,47683169,47678804,47677134,47676623,47672393,47666488,47665953,47665293,47664189,47663622,47663212,47661896,47659730,47659452,47658392	Gene ID= ENSG00000196562.14 TPM= 9.34 Transcript Type= protein_coding
chr20	48692323	48828016	48692323	48828016	-	transcript2803.chr20.nic@PREX1	transcript2803.chr20.nic	protein_coding	48827642,48747809,48745025,48734546,48726290,48708260,48700753,48692323	48828016,48747880,48745147,48734650,48726391,48708421,48700886,48692790	Gene ID= ENSG00000124126.13 TPM= 5.84 Transcript Type= NA
chr20	48741337	48828016	48741337	48828016	-	transcript2807.chr20.nic@PREX1	transcript2807.chr20.nic	protein_coding	48827642,48747809,48741337	48828016,48747880,48745147	Gene ID= ENSG00000124126.13 TPM= 4.67 Transcript Type= NA
chr20	48741337	48828016	48741337	48828016	-	transcript2809.chr20.nic@PREX1	transcript2809.chr20.nic	protein_coding	48827642,48741337	48828016,48747880	Gene ID= ENSG00000124126.13 TPM= 2.34 Transcript Type= NA
chr20	48624252	48827883	48624252	48827883	-	ENST00000371941.3@PREX1	ENST00000371941.3	protein_coding	48827642,48747809,48745025,48734546,48726290,48708260,48700753,48692672,48690947,48688657,48681235,48679651,48679360,48676193,48666283,48659919,48658136,48657040,48655290,48653361,48652586,48651396,48650894,48649996,48649300,48645851,48644409,48642407,48642168,48639766,48637711,48636463,48634676,48632496,48632277,48630728,48629449,48627861,48627548,48624252	48827883,48747880,48745147,48734650,48726391,48708421,48700886,48692790,48691096,48688804,48681335,48679754,48679409,48676268,48666355,48660061,48658228,48657188,48655375,48653497,48652706,48651583,48651055,48650206,48649576,48646057,48644497,48642489,48642258,48639894,48637752,48636683,48634775,48632639,48632391,48630794,48629621,48627963,48627615,48625927	Gene ID= ENSG00000124126.13 TPM= 54.88 Transcript Type= protein_coding
chr20	48734033	48737242	48734033	48737242	+	transcript2811.chr20.nnic@NA	transcript2811.chr20.nnic	NA	48734033	48737242	Gene ID= novel_gene_chr20_2812 TPM= 21.02 Transcript Type= NA
chr20	48976937	48981044	48976937	48981044	-	transcript2821.chr20.nnic@NA	transcript2821.chr20.nnic	NA	48976937	48981044	Gene ID= novel_gene_chr20_2822 TPM= 2.34 Transcript Type= NA
chr20	49046312	49096952	49046312	49096952	+	ENST00000262982.2@CSE1L	ENST00000262982.2	protein_coding	49046312,49058453,49063202,49066192,49066365,49067190,49068715,49070205,49072286,49072568,49074785,49075318,49076980,49078561,49084026,49085283,49088009,49089247,49089538,49090742,49090937,49092046,49094140,49094732,49096349	49046423,49058548,49063344,49066293,49066510,49067280,49068822,49070297,49072453,49072697,49074850,49075520,49077064,49078622,49084162,49085386,49088106,49089397,49089746,49090839,49091022,49092127,49094286,49094963,49096952	Gene ID= ENSG00000124207.16 TPM= 10.51 Transcript Type= protein_coding
chr20	49113523	49188367	49113523	49188367	-	ENST00000340954.11@STAU1	ENST00000340954.11	protein_coding	49188116,49179122,49174195,49153933,49151582,49135833,49124375,49123092,49119982,49118333,49117777,49117126,49115782,49113523	49188367,49179244,49174269,49154071,49151747,49135931,49124587,49123235,49120128,49118408,49118096,49117248,49115867,49114893	Gene ID= ENSG00000124214.19 TPM= 10.25 Transcript Type= protein_coding
chr20	49113523	49188367	49113523	49188367	-	ENST00000347458.9@STAU1	ENST00000347458.9	protein_coding	49188116,49153933,49151582,49135833,49124375,49123092,49119982,49118333,49117777,49117126,49115782,49113523	49188367,49154071,49151747,49135931,49124587,49123235,49120128,49118408,49118096,49117248,49115867,49114893	Gene ID= ENSG00000124214.19 TPM= 13.75 Transcript Type= protein_coding
chr20	49113341	49188367	49113341	49188367	-	ENST00000371828.7@STAU1	ENST00000371828.7	protein_coding	49188116,49174195,49153933,49151582,49135833,49124375,49123092,49119982,49118333,49117777,49117126,49115782,49113341	49188367,49174269,49154071,49151747,49135931,49124605,49123235,49120128,49118408,49118096,49117248,49115867,49114893	Gene ID= ENSG00000124214.19 TPM= 49.07 Transcript Type= protein_coding
chr20	49113339	49188367	49113339	49188367	-	ENST00000371856.6@STAU1	ENST00000371856.6	protein_coding	49188116,49174195,49165997,49153933,49151582,49135833,49124375,49123092,49119982,49118333,49117777,49117126,49115782,49113339	49188367,49174269,49166285,49154071,49151747,49135931,49124587,49123235,49120128,49118408,49118096,49117248,49115867,49114893	Gene ID= ENSG00000124214.19 TPM= 27.18 Transcript Type= protein_coding
chr20	49113523	49188367	49113523	49188367	-	ENST00000360426.8@STAU1	ENST00000360426.8	protein_coding	49188116,49174195,49153933,49151582,49135833,49124375,49123092,49119982,49118333,49117777,49117126,49115782,49113523	49188367,49174269,49154071,49151747,49135931,49124587,49123235,49120128,49118408,49118096,49117248,49115867,49114893	Gene ID= ENSG00000124214.19 TPM= 56.18 Transcript Type= protein_coding
chr20	49125907	49126604	49125907	49126604	+	transcript2848.chr20.nnic@NA	transcript2848.chr20.nnic	NA	49125907	49126604	Gene ID= novel_gene_chr20_2849 TPM= 2.34 Transcript Type= NA
chr20	49130270	49134447	49130270	49134447	+	transcript2846.chr20.nnic@NA	transcript2846.chr20.nnic	NA	49130270	49134447	Gene ID= novel_gene_chr20_2847 TPM= 10.51 Transcript Type= NA
chr20	49219365	49244077	49219365	49244077	+	transcript2858.chr20.nic@DDX27	transcript2858.chr20.nic	protein_coding	49219365,49221452,49222957,49223268,49224945,49225113,49226430,49228715,49230199,49233306,49233568,49234935,49236150,49236333,49238949,49239236,49241893,49242083,49242594,49243629	49219541,49221598,49223016,49223433,49224991,49225199,49226535,49228888,49230349,49233405,49233709,49235088,49236231,49236510,49239055,49239338,49241987,49242206,49242681,49244077	Gene ID= ENSG00000124228.14 TPM= 4.29 Transcript Type= NA
chr20	49219428	49243950	49219428	49243950	+	transcript2859.chr20.nic@DDX27	transcript2859.chr20.nic	protein_coding	49219428,49221452,49222957,49223268,49224945,49225113,49226430,49228715,49230199,49233306,49233568,49234935,49236333,49238949,49239236,49241893,49242083,49242594,49243629,49243816	49219541,49221598,49223016,49223433,49224991,49225199,49226535,49228888,49230349,49233405,49233709,49236231,49236510,49239055,49239338,49241987,49242206,49242681,49243703,49243950	Gene ID= ENSG00000124228.14 TPM= 3.7 Transcript Type= NA
chr20	49219347	49244077	49219347	49244077	+	ENST00000484427.5@DDX27	ENST00000484427.5	protein_coding	49219347,49221452,49222957,49223268,49224945,49225113,49226430,49228715,49230199,49233306,49233568,49236333,49238949,49239236,49241893,49242083,49242594,49243629,49243816	49219541,49221598,49223016,49223433,49224991,49225199,49226535,49228888,49230349,49233405,49236231,49236510,49239055,49239338,49241987,49242206,49242681,49243703,49244077	Gene ID= ENSG00000124228.14 TPM= 4.87 Transcript Type= retained_intron
chr20	49219416	49244070	49219416	49244070	+	ENST00000618172.4@DDX27	ENST00000618172.4	protein_coding	49219416,49221452,49222957,49223268,49224945,49225113,49226430,49228715,49230199,49233306,49233568,49234935,49236150,49236333,49238949,49239236,49241893,49242083,49242594,49243629,49243816	49219541,49221598,49223016,49223433,49224991,49225199,49226535,49228888,49230349,49233405,49233709,49235088,49236231,49236510,49239055,49239338,49241987,49242206,49242681,49243703,49244070	Gene ID= ENSG00000124228.14 TPM= 53.91 Transcript Type= protein_coding
chr20	49245900	49278219	49245900	49278219	-	ENST00000396105.5@ZNFX1	ENST00000396105.5	protein_coding	49278021,49275779,49269942,49266135,49264716,49263334,49260463,49257417,49255808,49254495,49253666,49252720,49251527,49245900	49278219,49275887,49271750,49266266,49264864,49263483,49260577,49257664,49255947,49254649,49253811,49252830,49251622,49249711	Gene ID= ENSG00000124201.14 TPM= 61.5 Transcript Type= protein_coding
chr20	49252609	49278095	49252609	49278095	-	transcript2871.chr20.nic@ZNFX1	transcript2871.chr20.nic	protein_coding	49278021,49275779,49269942,49266135,49264716,49263334,49260463,49257417,49255808,49254495,49253666,49252609	49278095,49275887,49271750,49266266,49264864,49263483,49260577,49257664,49255947,49254649,49253811,49252830	Gene ID= ENSG00000124201.14 TPM= 5.45 Transcript Type= NA
chr20	49257417	49278047	49257417	49278047	-	transcript2875.chr20.nic@ZNFX1	transcript2875.chr20.nic	protein_coding	49277930,49275779,49269942,49266135,49264716,49263334,49260463,49257417	49278047,49275887,49271750,49266266,49264864,49263483,49260577,49257664	Gene ID= ENSG00000124201.14 TPM= 2.92 Transcript Type= NA
chr20	49278178	49289260	49278178	49289260	+	ENST00000371743.7@ZFAS1	ENST00000371743.7	antisense_RNA	49278178,49279104,49280485,49280903,49289045	49278716,49279208,49280570,49280964,49289260	Gene ID= ENSG00000177410.12 TPM= 22.18 Transcript Type= antisense_RNA
chr20	49278642	49289260	49278642	49289260	+	ENST00000428008.5@ZFAS1	ENST00000428008.5	antisense_RNA	49278642,49279104,49280485,49280903,49289045	49278738,49279208,49280570,49280964,49289260	Gene ID= ENSG00000177410.12 TPM= 2.34 Transcript Type= antisense_RNA
chr20	49278178	49289260	49278178	49289260	+	ENST00000441722.5@ZFAS1	ENST00000441722.5	antisense_RNA	49278178,49279104,49280485,49289045	49278716,49279208,49280570,49289260	Gene ID= ENSG00000177410.12 TPM= 21.02 Transcript Type= antisense_RNA
chr20	49278178	49289260	49278178	49289260	+	ENST00000417721.5@ZFAS1	ENST00000417721.5	antisense_RNA	49278178,49279104,49289045	49278716,49279208,49289260	Gene ID= ENSG00000177410.12 TPM= 2.34 Transcript Type= antisense_RNA
chr20	49278602	49279646	49278602	49279646	+	transcript2889.chr20.nic@ZFAS1	transcript2889.chr20.nic	antisense_RNA	49278602,49279104	49278716,49279646	Gene ID= ENSG00000177410.12 TPM= 2.34 Transcript Type= NA
chr20	49278271	49289260	49278271	49289260	+	ENST00000458653.5@ZFAS1	ENST00000458653.5	antisense_RNA	49278271,49279104,49280485,49280903,49289045	49278397,49279208,49280570,49280964,49289260	Gene ID= ENSG00000177410.12 TPM= 1.17 Transcript Type= antisense_RNA
chr20	49285198	49289251	49285198	49289251	+	transcript2890.chr20.nnic@NA	transcript2890.chr20.nnic	NA	49285198	49289251	Gene ID= novel_gene_chr20_2891 TPM= 2.34 Transcript Type= NA
chr20	49503874	49568146	49503874	49568146	-	ENST00000244043.4@PTGIS	ENST00000244043.4	protein_coding	49568043,49550066,49547841,49544305,49539570,49524058,49514227,49513080,49511028,49503874	49568146,49550189,49548019,49544448,49539721,49524239,49514395,49513261,49511179,49508064	Gene ID= ENSG00000124212.5 TPM= 29.19 Transcript Type= protein_coding
chr20	49632945	49713878	49632945	49713878	-	ENST00000371711.4@B4GALT5	ENST00000371711.4	protein_coding	49713576,49656568,49646965,49643526,49642468,49640478,49639678,49637341,49632945	49713878,49656702,49647078,49643650,49642584,49640665,49639800,49637442,49636459	Gene ID= ENSG00000158470.5 TPM= 59.55 Transcript Type= protein_coding
chr20	49704318	49706040	49704318	49706040	+	transcript2908.chr20.nnic@NA	transcript2908.chr20.nnic	NA	49704318	49706040	Gene ID= novel_gene_chr20_2909 TPM= 3.5 Transcript Type= NA
chr20	49904829	49915529	49904829	49915529	-	transcript2915.chr20.nnic@SPATA2	transcript2915.chr20.nnic	protein_coding	49915380,49904829	49915529,49906845	Gene ID= ENSG00000158480.10 TPM= 7.01 Transcript Type= NA
chr20	49903391	49915508	49903391	49915508	-	ENST00000289431.9@SPATA2	ENST00000289431.9	protein_coding	49915380,49908155,49903391	49915508,49908592,49906845	Gene ID= ENSG00000158480.10 TPM= 10.51 Transcript Type= protein_coding
chr20	49936348	49953892	49936348	49953892	+	ENST00000244061.5@RNF114	ENST00000244061.5	protein_coding	49936348,49941561,49945382,49946136,49949248,49952076	49936552,49941711,49945488,49946250,49949355,49953892	Gene ID= ENSG00000124226.10 TPM= 88.74 Transcript Type= protein_coding
chr20	49936399	49939764	49936399	49939764	+	transcript2925.chr20.nnic@NA	transcript2925.chr20.nnic	NA	49936399	49939764	Gene ID= novel_gene_chr20_2926 TPM= 2.34 Transcript Type= NA
chr20	49982999	49988886	49982999	49988886	+	ENST00000244050.2@SNAI1	ENST00000244050.2	protein_coding	49982999,49983824,49987872	49983141,49984351,49988886	Gene ID= ENSG00000124216.3 TPM= 1.17 Transcript Type= protein_coding
chr20	50081124	50113172	50081124	50113172	-	ENST00000396059.7@UBE2V1	ENST00000396059.7	protein_coding	50113107,50084129,50081124	50113172,50084254,50082914	Gene ID= ENSG00000244687.11 TPM= 5.84 Transcript Type= processed_transcript
chr20	50081124	50113173	50081124	50113173	-	ENST00000371674.7@UBE2V1	ENST00000371674.7	protein_coding	50113107,50096672,50084129,50081124	50113173,50096820,50084254,50082914	Gene ID= ENSG00000244687.11 TPM= 49.62 Transcript Type= protein_coding
chr20	50081124	50115954	50081124	50115954	-	ENST00000340309.7@UBE2V1	ENST00000340309.7	protein_coding	50115485,50096672,50084129,50081124	50115954,50096820,50084254,50082914	Gene ID= ENSG00000244687.11 TPM= 4.09 Transcript Type= protein_coding
chr20	50124044	50153734	50124044	50153734	-	ENST00000453505.6@TMEM189	ENST00000453505.6	protein_coding	50153517,50151212,50143502,50130856,50129546,50127975,50124044	50153734,50151315,50143621,50130947,50129690,50128187,50125179	Gene ID= ENSG00000240849.10 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr20	50127258	50153746	50127258	50153746	-	transcript2948.chr20.nic@TMEM189	transcript2948.chr20.nic	protein_coding	50153517,50143502,50130856,50129546,50127258	50153746,50143621,50130947,50129690,50128187	Gene ID= ENSG00000240849.10 TPM= 2.34 Transcript Type= NA
chr20	50127341	50153746	50127341	50153746	-	transcript2950.chr20.nic@TMEM189	transcript2950.chr20.nic	protein_coding	50153517,50143502,50130856,50127341	50153746,50143621,50130947,50129690	Gene ID= ENSG00000240849.10 TPM= 3.5 Transcript Type= NA
chr20	50123737	50153734	50123737	50153734	-	ENST00000371650.9@TMEM189	ENST00000371650.9	protein_coding	50153517,50143502,50130865,50129546,50127975,50123737	50153734,50143621,50130947,50129690,50128187,50125179	Gene ID= ENSG00000240849.10 TPM= 12.84 Transcript Type= protein_coding
chr20	50190830	50192587	50190830	50192587	+	transcript2955.chr20.nnic@CEBPB	transcript2955.chr20.nnic	protein_coding	50190830,50192368	50192209,50192587	Gene ID= ENSG00000172216.5 TPM= 16.73 Transcript Type= NA
chr20	50190830	50192666	50190830	50192666	+	transcript2956.chr20.nnic@CEBPB	transcript2956.chr20.nnic	protein_coding	50190830,50192368	50192209,50192666	Gene ID= ENSG00000172216.5 TPM= 16.73 Transcript Type= NA
chr20	50190734	50192689	50190734	50192689	+	ENST00000303004.4@CEBPB	ENST00000303004.4	protein_coding	50190734	50192689	Gene ID= ENSG00000172216.5 TPM= 823.54 Transcript Type= protein_coding
chr20	50253134	50267122	50253134	50267122	+	transcript2977.chr20.nnic@NA	transcript2977.chr20.nnic	NA	50253134,50258358,50264202	50253607,50258466,50267122	Gene ID= novel_gene_chr20_2978 TPM= 3.5 Transcript Type= NA
chr20	50267468	50280208	50267468	50280208	+	transcript2969.chr20.nnic@SMIM25	transcript2969.chr20.nnic	lincRNA	50267468,50275646,50276057,50277491,50278177	50267663,50275735,50276390,50277613,50280208	Gene ID= ENSG00000224397.5 TPM= 15.18 Transcript Type= NA
chr20	50267486	50279795	50267486	50279795	+	ENST00000425497.5@SMIM25	ENST00000425497.5	lincRNA	50267486,50275646,50277491,50278177	50267663,50275735,50277613,50279795	Gene ID= ENSG00000224397.5 TPM= 8.17 Transcript Type= lincRNA
chr20	50285401	50286177	50285401	50286177	+	transcript2981.chr20.nnic@NA	transcript2981.chr20.nnic	NA	50285401	50286177	Gene ID= novel_gene_chr20_2982 TPM= 2.34 Transcript Type= NA
chr20	50510354	50585241	50510354	50585241	+	ENST00000371621.4@PTPN1	ENST00000371621.4	protein_coding	50510354,50561363,50564969,50568380,50574517,50578420,50579168,50579703,50581265,50582692	50510590,50561453,50565069,50568478,50574654,50578629,50579329,50579926,50581460,50585241	Gene ID= ENSG00000196396.9 TPM= 7.01 Transcript Type= protein_coding
chr20	50510363	50581858	50510363	50581858	+	transcript2996.chr20.nic@PTPN1	transcript2996.chr20.nic	protein_coding	50510363,50561363,50564969,50568380,50574517,50578420,50579168,50579703,50581265	50510590,50561453,50565069,50568478,50574654,50578629,50579329,50579926,50581858	Gene ID= ENSG00000196396.9 TPM= 3.5 Transcript Type= NA
chr20	50524571	50525422	50524571	50525422	-	transcript3004.chr20.nnic@NA	transcript3004.chr20.nnic	NA	50524571	50525422	Gene ID= novel_gene_chr20_3005 TPM= 3.5 Transcript Type= NA
chr20	50586108	50691987	50586108	50691987	-	transcript2984.chr20.nnic@RIPOR3	transcript2984.chr20.nnic	protein_coding	50691882,50691126,50630738,50619986,50616002,50611181,50610853,50609573,50609293,50608912,50608613,50608389,50604645,50602072,50597580,50596140,50595369,50594553,50593035,50592344,50589686,50587802,50586108	50691987,50691404,50630856,50620132,50616080,50611204,50610906,50609722,50609356,50608955,50608738,50608534,50604774,50602644,50597710,50596263,50595504,50594714,50593196,50592546,50589769,50587892,50587332	Gene ID= ENSG00000042062.11 TPM= 3.5 Transcript Type= NA
chr20	50586108	50691502	50586108	50691502	-	transcript2988.chr20.nnic@RIPOR3	transcript2988.chr20.nnic	protein_coding	50691126,50630738,50619986,50616002,50611181,50610853,50609573,50609293,50608613,50608389,50604645,50602072,50597580,50595369,50594553,50593035,50592344,50589686,50587802,50586108	50691502,50630856,50620132,50616080,50611204,50610906,50609722,50609356,50608738,50608534,50604774,50602644,50597710,50596263,50594703,50593196,50592546,50589769,50587892,50587332	Gene ID= ENSG00000042062.11 TPM= 2.34 Transcript Type= NA
chr20	50731544	50753741	50731544	50753741	+	ENST00000371610.6@PARD6B	ENST00000371610.6	protein_coding	50731544,50737857,50749659	50731852,50738079,50753741	Gene ID= ENSG00000124171.8 TPM= 17.51 Transcript Type= protein_coding
chr20	50794894	50877177	50794894	50877177	+	ENST00000358791.9@BCAS4	ENST00000358791.9	protein_coding	50794894,50818211,50830279,50841766,50875997,50876486	50795173,50818282,50830380,50841900,50876093,50877177	Gene ID= ENSG00000124243.17 TPM= 1.17 Transcript Type= protein_coding
chr20	50889048	50931240	50889048	50931240	-	ENST00000396029.7@ADNP	ENST00000396029.7	protein_coding	50930826,50928651,50903889,50902017,50889048	50931240,50928825,50904001,50902109,50894512	Gene ID= ENSG00000101126.15 TPM= 8.17 Transcript Type= protein_coding
chr20	50890303	50930990	50890303	50930990	-	ENST00000396032.7@ADNP	ENST00000396032.7	protein_coding	50930826,50903889,50902017,50890303	50930990,50904001,50902109,50894512	Gene ID= ENSG00000101126.15 TPM= 21.02 Transcript Type= protein_coding
chr20	50927562	50930365	50927562	50930365	-	transcript3029.chr20.nnic@NA	transcript3029.chr20.nnic	NA	50927562	50930365	Gene ID= novel_gene_chr20_3030 TPM= 3.5 Transcript Type= NA
chr20	50931004	50945145	50931004	50945145	+	transcript3023.chr20.nnic@ADNP-AS1	transcript3023.chr20.nnic	antisense_RNA	50931004,50931375,50933720,50944357	50931054,50931449,50933827,50945145	Gene ID= ENSG00000259456.3 TPM= 2.34 Transcript Type= NA
chr20	50934867	50958555	50934867	50958555	-	ENST00000371582.8@DPM1	ENST00000371582.8	protein_coding	50958363,50955186,50948629,50945847,50945737,50942031,50941129,50940865,50936148,50934867	50958555,50955285,50948662,50945923,50945762,50942126,50941209,50940933,50936262,50935236	Gene ID= ENSG00000000419.12 TPM= 2.34 Transcript Type= protein_coding
chr20	50934867	50958550	50934867	50958550	-	ENST00000371588.9@DPM1	ENST00000371588.9	protein_coding	50958363,50955186,50948629,50945847,50945737,50942031,50940865,50936148,50934867	50958550,50955285,50948662,50945923,50945762,50942126,50940933,50936262,50935236	Gene ID= ENSG00000000419.12 TPM= 17.51 Transcript Type= protein_coding
chr20	50958812	50961089	50958812	50961089	+	transcript3031.chr20.nnic@NA	transcript3031.chr20.nnic	NA	50958812	50961089	Gene ID= novel_gene_chr20_3032 TPM= 21.02 Transcript Type= NA
chr20	51386957	51542719	51386957	51542719	-	ENST00000371564.7@NFATC2	ENST00000371564.7	protein_coding	51542370,51523081,51516784,51475458,51473980,51454548,51435706,51435188,51432067,51398643,51386957	51542719,51524110,51516955,51475660,51474152,51454688,51435761,51435314,51432756,51398730,51391451	Gene ID= ENSG00000101096.19 TPM= 2.34 Transcript Type= protein_coding
chr20	51386957	51542719	51386957	51542719	-	ENST00000396009.7@NFATC2	ENST00000396009.7	protein_coding	51542370,51523081,51516784,51475458,51473980,51454548,51435706,51435188,51432067,51386957	51542719,51524110,51516955,51475660,51474152,51454688,51435761,51435314,51432756,51391451	Gene ID= ENSG00000101096.19 TPM= 4.67 Transcript Type= protein_coding
chr20	51711853	51768381	51711853	51768381	-	transcript3043.chr20.nic@ATP9A	transcript3043.chr20.nic	protein_coding	51768302,51729834,51725819,51711853	51768381,51729978,51725932,51713074	Gene ID= ENSG00000054793.13 TPM= 2.34 Transcript Type= NA
chr20	52151278	52191768	52151278	52191768	-	ENST00000371515.8@ZFP64	ENST00000371515.8	protein_coding	52191591,52186832,52165864,52164695,52160123,52151278	52191768,52187065,52166025,52164757,52160374,52153428	Gene ID= ENSG00000020256.19 TPM= 4.67 Transcript Type= protein_coding
chr20	53943541	54070594	53943541	54070594	-	ENST00000395961.7@BCAS1	ENST00000395961.7	protein_coding	54070433,54058647,54058085,54028392,53995892,53995012,53985287,53975389,53966906,53957432,53953432,53943541	54070594,54058723,54058154,54028972,53996050,53995056,53985499,53975430,53967073,53957497,53953695,53944996	Gene ID= ENSG00000064787.13 TPM= 2.34 Transcript Type= protein_coding
chr20	54207847	54219953	54207847	54219953	+	ENST00000371419.6@PFDN4	ENST00000371419.6	protein_coding	54207847,54214351,54215300,54219019	54208124,54214458,54215440,54219953	Gene ID= ENSG00000101132.9 TPM= 7.01 Transcript Type= protein_coding
chr20	55997440	56005472	55997440	56005472	-	ENST00000064571.2@CBLN4	ENST00000064571.2	protein_coding	56003881,56000731,55997440	56005472,56000847,55998754	Gene ID= ENSG00000054803.3 TPM= 3.5 Transcript Type= protein_coding
chr20	56358915	56368663	56358915	56368663	+	ENST00000371384.3@FAM210B	ENST00000371384.3	protein_coding	56358915,56365087,56366071	56359191,56365262,56368663	Gene ID= ENSG00000124098.9 TPM= 122.6 Transcript Type= protein_coding
chr20	56369390	56392295	56369390	56392295	-	ENST00000312783.10@AURKA	ENST00000312783.10	protein_coding	56392168,56390556,56388156,56386257,56384270,56382985,56381433,56373408,56370485,56369390	56392295,56390665,56388202,56386533,56384324,56383176,56381571,56373556,56370659,56370340	Gene ID= ENSG00000087586.17 TPM= 1.17 Transcript Type= protein_coding
chr20	56392379	56404255	56392379	56404255	+	transcript3063.chr20.nic@CSTF1	transcript3063.chr20.nic	protein_coding	56392379,56395521,56397207,56397644,56398967,56403468	56392538,56395721,56397484,56397841,56399357,56404255	Gene ID= ENSG00000101138.11 TPM= 5.84 Transcript Type= NA
chr20	56392394	56406369	56392394	56406369	+	ENST00000217109.8@CSTF1	ENST00000217109.8	protein_coding	56392394,56395521,56397207,56397644,56398967,56403468	56392713,56395721,56397484,56397841,56399357,56406369	Gene ID= ENSG00000101138.11 TPM= 4.67 Transcript Type= protein_coding
chr20	56411923	56460382	56411923	56460382	+	transcript3076.chr20.nnic@CASS4	transcript3076.chr20.nnic	protein_coding	56411923,56412337,56437164,56445900,56450599,56451819,56458340	56412214,56412494,56437424,56446001,56450679,56453129,56460382	Gene ID= ENSG00000087589.16 TPM= 6.22 Transcript Type= NA
chr20	56412058	56460382	56412058	56460382	+	transcript3079.chr20.nnic@CASS4	transcript3079.chr20.nnic	protein_coding	56412058,56437164,56445900,56450599,56451819,56458340	56412494,56437424,56446001,56450679,56453129,56460382	Gene ID= ENSG00000087589.16 TPM= 5.06 Transcript Type= NA
chr20	56412058	56460382	56412058	56460382	+	transcript3080.chr20.nic@CASS4	transcript3080.chr20.nic	protein_coding	56412058,56437164,56445900,56450599,56451819,56458340	56412494,56437586,56446001,56450679,56453129,56460382	Gene ID= ENSG00000087589.16 TPM= 14.4 Transcript Type= NA
chr20	56468591	56519449	56468591	56519449	+	ENST00000357348.9@RTFDC1	ENST00000357348.9	protein_coding	56468591,56473301,56474678,56476985,56484111,56513315,56516935,56517106,56518087	56468766,56473395,56474771,56477124,56484189,56513428,56516989,56517201,56519449	Gene ID= ENSG00000022277.12 TPM= 155.29 Transcript Type= protein_coding
chr20	56468614	56518887	56468614	56518887	+	ENST00000395881.7@RTFDC1	ENST00000395881.7	protein_coding	56468614,56473301,56474678,56476985,56484111,56513315,56517106,56518087	56468766,56473395,56474771,56477124,56484189,56513428,56517201,56518887	Gene ID= ENSG00000022277.12 TPM= 5.84 Transcript Type= protein_coding
chr20	56629302	56639283	56629302	56639283	+	ENST00000201031.2@TFAP2C	ENST00000201031.2	protein_coding	56629302,56631205,56631805,56633353,56634150,56636610,56637728	56629592,56631690,56631856,56633569,56634268,56636754,56639283	Gene ID= ENSG00000087510.6 TPM= 18.68 Transcript Type= protein_coding
chr20	57351224	57378456	57351224	57378456	+	transcript3096.chr20.nnic@RAE1	transcript3096.chr20.nnic	protein_coding	57351224,57354032,57354712,57356446,57365356,57366807,57367008,57368705,57373475,57373663,57374607,57376179,57378013	57351422,57354128,57354816,57356538,57365442,57366893,57367079,57368812,57373581,57373738,57374801,57376266,57378456	Gene ID= ENSG00000101146.12 TPM= 2.34 Transcript Type= NA
chr20	57351010	57379211	57351010	57379211	+	ENST00000395841.6@RAE1	ENST00000395841.6	protein_coding	57351010,57354032,57354712,57356446,57365356,57366807,57367008,57368705,57373475,57373663,57374607,57378013	57351422,57354128,57354816,57356538,57365442,57366893,57367079,57368812,57373581,57373738,57374801,57379211	Gene ID= ENSG00000101146.12 TPM= 37.36 Transcript Type= protein_coding
chr20	57391407	57409333	57391407	57409333	+	ENST00000356208.9@RBM38	ENST00000356208.9	protein_coding	57391407,57392654,57393279,57407543	57391818,57392777,57393333,57409333	Gene ID= ENSG00000132819.16 TPM= 61.88 Transcript Type= protein_coding
chr20	57561080	57568112	57561080	57568112	+	ENST00000319441.5@PCK1	ENST00000319441.5	protein_coding	57561080,57561372,57562071,57562696,57563028,57563565,57564169,57564482,57565040,57565350	57561203,57561635,57562252,57562899,57563215,57563727,57564393,57564613,57565135,57568112	Gene ID= ENSG00000124253.10 TPM= 4.67 Transcript Type= protein_coding
chr20	57603846	57620576	57603846	57620576	-	ENST00000395822.7@ZBP1	ENST00000395822.7	protein_coding	57620262,57615512,57614887,57613163,57611727,57610149,57603846	57620576,57615580,57615060,57613330,57611930,57610367,57604769	Gene ID= ENSG00000124256.14 TPM= 3.5 Transcript Type= protein_coding
chr20	57648392	57709902	57648392	57709902	-	ENST00000341744.7@PMEPA1	ENST00000341744.7	protein_coding	57709474,57659543,57653033,57648392	57709902,57659697,57653086,57652598	Gene ID= ENSG00000124225.15 TPM= 28.02 Transcript Type= protein_coding
chr20	57710183	57712780	57710183	57712780	+	ENST00000614771.1@NKILA	ENST00000614771.1	antisense_RNA	57710183	57712780	Gene ID= ENSG00000278709.1 TPM= 3.5 Transcript Type= antisense_RNA
chr20	58309696	58367507	58309696	58367507	+	ENST00000244040.3@RAB22A	ENST00000244040.3	protein_coding	58309696,58311043,58343718,58353273,58353432,58354156,58359606	58310012,58311122,58343799,58353344,58353538,58354265,58367507	Gene ID= ENSG00000124209.3 TPM= 52.54 Transcript Type= protein_coding
chr20	58309710	58360670	58309710	58360670	+	transcript3125.chr20.nnic@RAB22A	transcript3125.chr20.nnic	protein_coding	58309710,58311043,58343718,58353432,58354156,58359606	58310012,58311122,58343799,58353538,58354265,58360670	Gene ID= ENSG00000124209.3 TPM= 2.34 Transcript Type= NA
chr20	58389122	58451101	58389122	58451101	+	ENST00000475243.5@VAPB	ENST00000475243.5	protein_coding	58389122,58418211,58434602,58438945,58440907,58444077	58389517,58418363,58434705,58439025,58441083,58451101	Gene ID= ENSG00000124164.15 TPM= 92.24 Transcript Type= protein_coding
chr20	58389313	58445552	58389313	58445552	+	ENST00000395802.7@VAPB	ENST00000395802.7	protein_coding	58389313,58418211,58444077	58389517,58418363,58445552	Gene ID= ENSG00000124164.15 TPM= 2.34 Transcript Type= protein_coding
chr20	58651237	58677717	58651237	58677717	+	transcript3148.chr20.nic@STX16	transcript3148.chr20.nic	protein_coding	58651237,58659623,58667490,58667987,58669291,58670512,58673631,58676187	58652138,58659634,58667597,58668127,58669453,58670603,58673711,58677717	Gene ID= ENSG00000124222.22 TPM= 2.34 Transcript Type= NA
chr20	58651237	58678657	58651237	58678657	+	transcript3149.chr20.nic@STX16	transcript3149.chr20.nic	protein_coding	58651237,58659623,58667490,58667987,58670512,58671154,58673631,58676187	58652138,58659634,58667597,58668127,58670603,58671297,58673711,58678657	Gene ID= ENSG00000124222.22 TPM= 5.06 Transcript Type= NA
chr20	58651218	58678657	58651218	58678657	+	transcript3151.chr20.nic@STX16	transcript3151.chr20.nic	protein_coding	58651218,58659623,58667490,58667987,58670512,58673631,58676187	58652087,58659634,58667597,58668127,58670603,58673711,58678657	Gene ID= ENSG00000124222.22 TPM= 2.72 Transcript Type= NA
chr20	58651272	58679526	58651272	58679526	+	ENST00000355957.9@STX16	ENST00000355957.9	protein_coding	58651272,58659623,58667490,58667987,58669291,58670512,58671154,58673631,58676187	58652087,58659634,58667597,58668127,58669453,58670603,58671297,58673711,58679526	Gene ID= ENSG00000124222.22 TPM= 17.9 Transcript Type= protein_coding
chr20	58653857	58656331	58653857	58656331	-	transcript3155.chr20.nnic@NA	transcript3155.chr20.nnic	NA	58653857	58656331	Gene ID= novel_gene_chr20_3156 TPM= 2.34 Transcript Type= NA
chr20	58692613	58715844	58692613	58715844	+	ENST00000356091.10@NPEPL1	ENST00000356091.10	protein_coding	58692613,58693737,58694422,58698684,58699197,58701016,58707123,58712479,58713420,58713917,58714560,58715168	58693050,58693922,58694592,58698773,58699278,58701158,58707200,58712579,58713543,58714093,58714670,58715844	Gene ID= ENSG00000215440.11 TPM= 103.92 Transcript Type= protein_coding
chr20	58710034	58713057	58710034	58713057	-	transcript3162.chr20.nnic@NA	transcript3162.chr20.nnic	NA	58710034	58713057	Gene ID= novel_gene_chr20_3163 TPM= 10.51 Transcript Type= NA
chr20	58889100	58911192	58889100	58911192	+	ENST00000477931.5@GNAS	ENST00000477931.5	protein_coding	58889100,58895612,58898941,58903531,58903672,58905383,58909162,58909350,58909521,58909684,58909951,58910334,58910683	58889353,58895684,58898985,58903585,58903791,58905480,58909216,58909423,58909579,58909804,58910081,58910401,58911192	Gene ID= ENSG00000087460.24 TPM= 24.53 Transcript Type= processed_transcript
chr20	58889171	58911179	58889171	58911179	+	ENST00000480975.5@GNAS	ENST00000480975.5	protein_coding	58889171,58895612,58903531,58903672,58905383,58909162,58909350,58909521,58909684,58909951,58910334,58910683	58889353,58895684,58903585,58903791,58905480,58909216,58909423,58909579,58909804,58910081,58910401,58911179	Gene ID= ENSG00000087460.24 TPM= 41.53 Transcript Type= processed_transcript
chr20	58891303	58911192	58891303	58911192	+	ENST00000371085.7@GNAS	ENST00000371085.7	protein_coding	58891303,58895612,58898941,58903531,58903672,58905383,58909162,58909350,58909521,58909684,58909951,58910334,58910683	58891865,58895684,58898985,58903585,58903791,58905480,58909216,58909423,58909579,58909804,58910081,58910401,58911192	Gene ID= ENSG00000087460.24 TPM= 566.67 Transcript Type= protein_coding
chr20	58891364	58911192	58891364	58911192	+	ENST00000265620.11@GNAS	ENST00000265620.11	protein_coding	58891364,58895612,58903531,58903672,58905383,58909162,58909350,58909521,58909684,58909951,58910334,58910683	58891865,58895684,58903585,58903791,58905480,58909216,58909423,58909579,58909804,58910081,58910401,58911192	Gene ID= ENSG00000087460.24 TPM= 1049.2 Transcript Type= protein_coding
chr20	58893068	58896304	58893068	58896304	-	transcript3261.chr20.nnic@NA	transcript3261.chr20.nnic	NA	58893068	58896304	Gene ID= novel_gene_chr20_3262 TPM= 44.37 Transcript Type= NA
chr20	58981247	58995133	58981247	58995133	+	transcript3265.chr20.nic@NELFCD	transcript3265.chr20.nic	protein_coding	58981247,58986093,58986754,58987708,58988914,58989488,58989858,58990910,58991312,58991881,58992998,58993449,58993624,58994110,58994642	58981369,58986208,58986863,58987817,58989021,58989640,58989988,58991075,58991446,58992020,58993112,58993544,58993675,58994239,58995133	Gene ID= ENSG00000101158.13 TPM= 7.01 Transcript Type= NA
chr20	58981208	58995133	58981208	58995133	+	ENST00000602795.5@NELFCD	ENST00000602795.5	protein_coding	58981208,58986093,58986754,58987708,58988914,58989488,58989858,58990910,58991312,58991881,58992998,58993449,58993624,58994110,58994642	58981369,58986208,58986863,58987817,58989021,58989640,58989988,58991075,58991446,58992020,58993112,58993544,58993764,58994239,58995133	Gene ID= ENSG00000101158.13 TPM= 68.89 Transcript Type= protein_coding
chr20	58981275	58990400	58981275	58990400	+	ENST00000482747.1@NELFCD	ENST00000482747.1	protein_coding	58981275,58986093,58986754,58987708,58988914,58989858	58981369,58986208,58986863,58987817,58989640,58990400	Gene ID= ENSG00000101158.13 TPM= 2.34 Transcript Type= retained_intron
chr20	58995187	59007246	58995187	59007246	-	transcript3274.chr20.nnic@CTSZ	transcript3274.chr20.nnic	protein_coding	59006986,59006322,59001465,58995187	59007246,59006485,59001644,58995219	Gene ID= ENSG00000101160.13 TPM= 2.34 Transcript Type= NA
chr20	58995185	59007247	58995185	59007247	-	ENST00000217131.5@CTSZ	ENST00000217131.5	protein_coding	59006986,59006322,59001465,58997603,58996639,58995185	59007247,59006485,59001644,58997753,58996801,58995759	Gene ID= ENSG00000101160.13 TPM= 8.17 Transcript Type= protein_coding
chr20	58996587	59007230	58996587	59007230	-	ENST00000503833.6@CTSZ	ENST00000503833.6	protein_coding	59006986,59006322,59001465,58997603,58996587	59007230,59006485,59001644,58997753,58996801	Gene ID= ENSG00000101160.13 TPM= 3.5 Transcript Type= retained_intron
chr20	59019254	59026654	59019254	59026654	+	ENST00000217133.1@TUBB1	ENST00000217133.1	protein_coding	59019254,59022845,59023490,59023705	59019579,59022953,59023600,59026654	Gene ID= ENSG00000101162.3 TPM= 4.67 Transcript Type= protein_coding
chr20	59025467	59032382	59025467	59032382	-	ENST00000243997.7@ATP5E	ENST00000243997.7	protein_coding	59032220,59030303,59025467	59032382,59030429,59028841	Gene ID= ENSG00000124172.9 TPM= 1.17 Transcript Type= protein_coding
chr20	59028678	59032345	59028678	59032345	-	ENST00000395659.1@ATP5E	ENST00000395659.1	protein_coding	59032220,59028678	59032345,59030429	Gene ID= ENSG00000124172.9 TPM= 3.5 Transcript Type= protein_coding
chr20	59033145	59042909	59033145	59042909	-	ENST00000355937.8@PRELID3B	ENST00000355937.8	protein_coding	59042699,59038466,59037191,59036690,59036471,59033145	59042909,59038634,59037280,59036760,59036573,59035126	Gene ID= ENSG00000101166.15 TPM= 100.41 Transcript Type= protein_coding
chr20	59300443	59325992	59300443	59325992	+	ENST00000311585.11@EDN3	ENST00000311585.11	protein_coding	59300443,59301410,59321017,59322372,59324331	59300864,59301722,59321193,59322452,59325992	Gene ID= ENSG00000124205.15 TPM= 2.34 Transcript Type= protein_coding
chr20	59577477	59847711	59577477	59847711	+	transcript3299.chr20.nnic@PHACTR3	transcript3299.chr20.nnic	protein_coding	59577477,59583469,59743107,59747758,59755182,59767186,59773279,59774243,59806041,59836505,59840369,59841395,59845189,59847115	59577617,59583688,59743268,59747835,59755364,59767395,59773453,59774490,59806194,59836560,59840430,59841535,59845265,59847711	Gene ID= ENSG00000087495.16 TPM= 3.3 Transcript Type= NA
chr20	59577438	59847711	59577438	59847711	+	transcript3305.chr20.nic@PHACTR3	transcript3305.chr20.nic	protein_coding	59577438,59743107,59747758,59755182,59773279,59774243,59806041,59836505,59840369,59841395,59845189,59847115	59577617,59743268,59747835,59755364,59773453,59774490,59806194,59836560,59840430,59841535,59845265,59847711	Gene ID= ENSG00000087495.16 TPM= 15.96 Transcript Type= NA
chr20	59835853	59847711	59835853	59847711	+	ENST00000492611.5@PHACTR3	ENST00000492611.5	protein_coding	59835853,59840369,59841395,59845189,59847115	59836560,59840430,59841535,59845265,59847711	Gene ID= ENSG00000087495.16 TPM= 12.06 Transcript Type= retained_intron
chr20	59577509	59847711	59577509	59847711	+	ENST00000359926.7@PHACTR3	ENST00000359926.7	protein_coding	59577509,59743107,59747758,59755182,59767186,59773279,59774243,59806041,59836505,59840369,59841395,59845189,59847115	59577617,59743268,59747835,59755364,59767395,59773453,59774490,59806194,59836560,59840430,59841535,59845265,59847711	Gene ID= ENSG00000087495.16 TPM= 37.56 Transcript Type= protein_coding
chr20	59835985	59839050	59835985	59839050	+	transcript3311.chr20.nnic@NA	transcript3311.chr20.nnic	NA	59835985	59839050	Gene ID= novel_gene_chr20_3312 TPM= 2.34 Transcript Type= NA
chr20	59936668	59940297	59936668	59940297	-	ENST00000370996.4@PPP1R3D	ENST00000370996.4	protein_coding	59936668	59940297	Gene ID= ENSG00000132825.6 TPM= 3.5 Transcript Type= protein_coding
chr20	59994178	60014461	59994178	60014461	+	transcript3324.chr20.nic@CDH26	transcript3324.chr20.nic	protein_coding	59994178,59995833,59996631,59999586,60001343,60002813,60006713,60012527	59994489,59996054,59996761,59999663,60001411,60002866,60006787,60014461	Gene ID= ENSG00000124215.16 TPM= 2.34 Transcript Type= NA
chr20	61974798	62065810	61974798	62065810	-	ENST00000252996.8@TAF4	ENST00000252996.8	protein_coding	62064451,62014547,62012815,62010046,62009052,62007547,62006510,62003731,62003160,62000552,62000124,61998983,61998136,61997550,61974798	62065810,62014707,62012934,62010165,62009174,62007636,62006758,62003878,62003274,62000721,62000254,61999108,61998192,61997669,61976335	Gene ID= ENSG00000130699.18 TPM= 5.84 Transcript Type= protein_coding
chr20	62136735	62143489	62136735	62143489	-	transcript3336.chr20.nic@PSMA7	transcript3336.chr20.nic	protein_coding	62143208,62140818,62139075,62138171,62137364,62136735	62143489,62140944,62139905,62138290,62137426,62136949	Gene ID= ENSG00000101182.14 TPM= 14.01 Transcript Type= NA
chr20	62136735	62143430	62136735	62143430	-	ENST00000370873.8@PSMA7	ENST00000370873.8	protein_coding	62143208,62140818,62139781,62139075,62138171,62137364,62136735	62143430,62140944,62139905,62139197,62138290,62137426,62136949	Gene ID= ENSG00000101182.14 TPM= 381.8 Transcript Type= protein_coding
chr20	62183016	62203568	62183016	62203568	+	transcript3349.chr20.nic@MTG2	transcript3349.chr20.nic	protein_coding	62183016,62193416,62195802,62197852,62198634,62199119,62200683,62203084	62183057,62193624,62195949,62197967,62198852,62199257,62202843,62203568	Gene ID= ENSG00000101181.17 TPM= 21.02 Transcript Type= NA
chr20	62238485	62296212	62238485	62296212	+	ENST00000313733.7@OSBPL2	ENST00000313733.7	protein_coding	62238485,62256057,62259981,62263616,62272125,62273309,62279157,62281058,62281790,62284046,62286583,62289207,62291703,62293785	62238597,62256221,62260125,62263691,62272259,62273406,62279339,62281165,62281879,62284169,62286711,62289330,62291793,62296212	Gene ID= ENSG00000130703.15 TPM= 23.94 Transcript Type= protein_coding
chr20	62238521	62296211	62238521	62296211	+	ENST00000358053.3@OSBPL2	ENST00000358053.3	protein_coding	62238521,62256057,62260017,62263616,62272125,62273309,62279157,62281058,62281790,62284046,62286583,62289207,62291703,62293785	62238597,62256221,62260125,62263691,62272259,62273406,62279339,62281165,62281879,62284169,62286711,62289330,62291793,62296211	Gene ID= ENSG00000130703.15 TPM= 7.59 Transcript Type= protein_coding
chr20	62302093	62308862	62302093	62308862	+	ENST00000491935.5@ADRM1	ENST00000491935.5	protein_coding	62302093,62302896,62303568,62304461,62306197,62306648,62307371,62307596,62308021,62308368,62308655	62302142,62303049,62303781,62304577,62306320,62306734,62307452,62307828,62308178,62308470,62308862	Gene ID= ENSG00000130706.12 TPM= 256.5 Transcript Type= protein_coding
chr20	62302948	62308862	62302948	62308862	+	transcript3376.chr20.nnic@ADRM1	transcript3376.chr20.nnic	protein_coding	62302948,62303568,62304461,62306197,62306648,62307371,62307596,62308021,62308655	62303049,62303781,62304577,62306320,62306734,62307452,62307828,62308178,62308862	Gene ID= ENSG00000130706.12 TPM= 13.86 Transcript Type= NA
chr20	62302896	62308860	62302896	62308860	+	ENST00000620230.4@ADRM1	ENST00000620230.4	protein_coding	62302896,62303568,62306197,62306648,62307371,62307596,62308021,62308368,62308655	62303049,62303781,62306320,62306734,62307452,62307828,62308178,62308470,62308860	Gene ID= ENSG00000130706.12 TPM= 21.33 Transcript Type= protein_coding
chr20	62309065	62367312	62309065	62367312	-	ENST00000252999.7@LAMA5	ENST00000252999.7	protein_coding	62366949,62362400,62353134,62352242,62351909,62351704,62346913,62346682,62346506,62346081,62345818,62338468,62338232,62338016,62337804,62337590,62336734,62336340,62335217,62335021,62334522,62334186,62333901,62333564,62333375,62333090,62332557,62332372,62331032,62330743,62330488,62329777,62329138,62328844,62328241,62327866,62327529,62327233,62326865,62326677,62325316,62324441,62324080,62323776,62323456,62322658,62322269,62322019,62320739,62320559,62319684,62318843,62318454,62317662,62317345,62316882,62316671,62315948,62315028,62314799,62314555,62314304,62313649,62313327,62313088,62312888,62312632,62312400,62312173,62311920,62311614,62311401,62311162,62310902,62310665,62310419,62310178,62309988,62309716,62309065	62367312,62362552,62353251,62352360,62352079,62351801,62347028,62346800,62346596,62346215,62345877,62338608,62338369,62338150,62337938,62337727,62336786,62336445,62335269,62335126,62334621,62334342,62334039,62333706,62333481,62333243,62332717,62332480,62331129,62330944,62330614,62329916,62329253,62329055,62328445,62328010,62327669,62327406,62326966,62326760,62325546,62324554,62324204,62323856,62323670,62322758,62322449,62322168,62320890,62320669,62319795,62319013,62318650,62317778,62317499,62317023,62316773,62316058,62315207,62314947,62314725,62314440,62313802,62313460,62313250,62313010,62312780,62312532,62312316,62312050,62311784,62311536,62311307,62311094,62310829,62310572,62310311,62310081,62309835,62309475	Gene ID= ENSG00000130702.15 TPM= 265.04 Transcript Type= protein_coding
chr20	62324571	62326243	62324571	62326243	+	transcript3398.chr20.nnic@NA	transcript3398.chr20.nnic	NA	62324571	62326243	Gene ID= novel_gene_chr20_3399 TPM= 5.84 Transcript Type= NA
chr20	62342540	62343786	62342540	62343786	+	transcript3396.chr20.nnic@NA	transcript3396.chr20.nnic	NA	62342540	62343786	Gene ID= novel_gene_chr20_3397 TPM= 17.51 Transcript Type= NA
chr20	62387116	62388519	62387116	62388519	+	ENST00000343986.8@RPS21	ENST00000343986.8	protein_coding	62387116,62387321,62387611,62387843,62388309,62388457	62387136,62387388,62387674,62387914,62388364,62388519	Gene ID= ENSG00000171858.17 TPM= 137.78 Transcript Type= protein_coding
chr20	62387123	62388519	62387123	62388519	+	ENST00000492356.2@RPS21	ENST00000492356.2	protein_coding	62387123,62387321,62387611,62387843,62388309	62387136,62387388,62387674,62387914,62388519	Gene ID= ENSG00000171858.17 TPM= 2.34 Transcript Type= processed_transcript
chr20	62388632	62407285	62388632	62407285	-	ENST00000279101.9@CABLES2	ENST00000279101.9	protein_coding	62406915,62396521,62396315,62394937,62394157,62393440,62392920,62392389,62391249,62388632	62407285,62396592,62396407,62395014,62394265,62393605,62393023,62392495,62391453,62391111	Gene ID= ENSG00000149679.11 TPM= 5.84 Transcript Type= protein_coding
chr20	62463497	62475682	62463497	62475682	-	transcript3412.chr20.nic@GATA5	transcript3412.chr20.nic	protein_coding	62474999,62473403,62466426,62465834,62465340,62463497	62475682,62473578,62466551,62465921,62465464,62464991	Gene ID= ENSG00000130700.6 TPM= 2.34 Transcript Type= NA
chr20	62463497	62475970	62463497	62475970	-	ENST00000252997.2@GATA5	ENST00000252997.2	protein_coding	62475930,62474999,62473403,62466426,62465834,62465340,62463497	62475970,62475542,62473578,62466551,62465921,62465464,62464991	Gene ID= ENSG00000130700.6 TPM= 4.67 Transcript Type= protein_coding
chr20	62642270	62672291	62642270	62672291	+	transcript3416.chr20.nnic@SLCO4A1	transcript3416.chr20.nnic	protein_coding	62642270,62656359,62658677,62660412,62661064,62664934,62666380,62667745,62668012,62668477,62668930,62669951,62671750	62642553,62657250,62658767,62660533,62661175,62665088,62666575,62667910,62668184,62668541,62669078,62670120,62672291	Gene ID= ENSG00000101187.15 TPM= 6.39 Transcript Type= NA
chr20	62642483	62672293	62642483	62672293	+	transcript3432.chr20.nic@SLCO4A1	transcript3432.chr20.nic	protein_coding	62642483,62656359,62658677,62660412,62661064,62664934,62666380,62667745,62668477,62668930,62671750	62642553,62657250,62658767,62660533,62661175,62665088,62666575,62667910,62668541,62669078,62672293	Gene ID= ENSG00000101187.15 TPM= 13.98 Transcript Type= NA
chr20	62642445	62672295	62642445	62672295	+	ENST00000217159.5@SLCO4A1	ENST00000217159.5	protein_coding	62642445,62656359,62658677,62660412,62661064,62664934,62666380,62667745,62668012,62668477,62668930,62671750	62642553,62657250,62658767,62660533,62661175,62665088,62666575,62667910,62668184,62668541,62669078,62672295	Gene ID= ENSG00000101187.15 TPM= 49 Transcript Type= protein_coding
chr20	62642520	62672293	62642520	62672293	+	ENST00000497209.5@SLCO4A1	ENST00000497209.5	protein_coding	62642520,62656359,62658677,62660412,62661064,62664934,62666380,62667745,62668930,62671750	62642553,62657250,62658767,62660533,62661175,62665088,62666575,62668541,62669078,62672293	Gene ID= ENSG00000101187.15 TPM= 8.14 Transcript Type= nonsense_mediated_decay
chr20	62656359	62672293	62656359	62672293	+	ENST00000370507.5@SLCO4A1	ENST00000370507.5	protein_coding	62656359,62658677,62660412,62661064,62664934,62666380,62667745,62668012,62668477,62668930,62671750	62657250,62658767,62660533,62661175,62665088,62666575,62667910,62668184,62668541,62669078,62672293	Gene ID= ENSG00000101187.15 TPM= 43.17 Transcript Type= protein_coding
chr20	62796430	62801738	62796430	62801738	+	transcript3448.chr20.nnic@MRGBP	transcript3448.chr20.nnic	protein_coding	62796430,62797110,62798587,62798853,62799456	62796671,62797231,62798668,62799049,62801738	Gene ID= ENSG00000101189.6 TPM= 2.34 Transcript Type= NA
chr20	62796430	62800593	62796430	62800593	+	transcript3454.chr20.nic@MRGBP	transcript3454.chr20.nic	protein_coding	62796430,62797110,62799456	62796671,62799049,62800593	Gene ID= ENSG00000101189.6 TPM= 2.34 Transcript Type= NA
chr20	62805341	62814000	62805341	62814000	+	transcript3443.chr20.nnic@OGFR	transcript3443.chr20.nnic	protein_coding	62805341,62807537,62808247,62809585,62810499,62811462,62812230	62805803,62807605,62808325,62809663,62810565,62811610,62814000	Gene ID= ENSG00000060491.16 TPM= 8.96 Transcript Type= NA
chr20	62804835	62814000	62804835	62814000	+	ENST00000290291.10@OGFR	ENST00000290291.10	protein_coding	62804835,62807537,62808247,62809585,62810499,62811462,62812230	62805030,62807605,62808325,62809663,62810565,62811610,62814000	Gene ID= ENSG00000060491.16 TPM= 243.64 Transcript Type= protein_coding
chr20	62817062	62841159	62817062	62841159	+	ENST00000343916.7@COL9A3	ENST00000343916.7	protein_coding	62817062,62817567,62818518,62819222,62819929,62821181,62821507,62821757,62822111,62822591,62824445,62824968,62825817,62826204,62826767,62827241,62827923,62828764,62828923,62829455,62829628,62829766,62830360,62830517,62832154,62833020,62835921,62836187,62836478,62837083,62838684,62840542	62817142,62817635,62818553,62819293,62819982,62821216,62821530,62821810,62822164,62822632,62824501,62825021,62825870,62826257,62826820,62827294,62827976,62828817,62828976,62829499,62829681,62829819,62830413,62830588,62832189,62833064,62835953,62836333,62836532,62837265,62838761,62841159	Gene ID= ENSG00000092758.15 TPM= 1.17 Transcript Type= protein_coding
chr20	62841115	62861822	62841115	62861822	-	transcript3463.chr20.nnic@TCFL5	transcript3463.chr20.nnic	protein_coding	62860830,62860125,62859364,62857395,62854016,62841115	62861822,62860308,62859526,62857638,62854157,62842097	Gene ID= ENSG00000101190.12 TPM= 2.34 Transcript Type= NA
chr20	62845138	62861822	62845138	62861822	-	transcript3467.chr20.nnic@TCFL5	transcript3467.chr20.nnic	protein_coding	62860830,62860125,62859364,62857395,62854016,62845138	62861822,62860308,62859526,62857638,62854157,62846117	Gene ID= ENSG00000101190.12 TPM= 2.34 Transcript Type= NA
chr20	62851493	62861822	62851493	62861822	-	transcript3469.chr20.nnic@TCFL5	transcript3469.chr20.nnic	protein_coding	62860830,62860125,62859364,62857395,62854016,62851493	62861822,62860308,62859526,62857638,62854157,62852888	Gene ID= ENSG00000101190.12 TPM= 2.34 Transcript Type= NA
chr20	62841115	62861763	62841115	62861763	-	ENST00000335351.7@TCFL5	ENST00000335351.7	protein_coding	62861024,62860125,62859364,62857395,62854016,62841115	62861763,62860308,62859526,62857638,62854157,62842097	Gene ID= ENSG00000101190.12 TPM= 5.84 Transcript Type= protein_coding
chr20	62845138	62861763	62845138	62861763	-	ENST00000217162.5@TCFL5	ENST00000217162.5	protein_coding	62861024,62860125,62859364,62857395,62854016,62845138	62861763,62860308,62859526,62857638,62854157,62846117	Gene ID= ENSG00000101190.12 TPM= 2.34 Transcript Type= protein_coding
chr20	62904998	62937952	62904998	62937952	-	ENST00000370371.8@DIDO1	ENST00000370371.8	protein_coding	62937796,62914210,62910774,62909699,62907147,62904998	62937952,62914406,62911614,62910020,62907359,62906100	Gene ID= ENSG00000101191.16 TPM= 15.18 Transcript Type= protein_coding
chr20	62905005	62926469	62905005	62926469	-	ENST00000354665.8@DIDO1	ENST00000354665.8	protein_coding	62926432,62914210,62910774,62909699,62907147,62905005	62926469,62914406,62911614,62910020,62907359,62906100	Gene ID= ENSG00000101191.16 TPM= 30.36 Transcript Type= protein_coding
chr20	62901133	62904805	62901133	62904805	+	transcript3486.chr20.nnic@NA	transcript3486.chr20.nnic	NA	62901133	62904805	Gene ID= novel_gene_chr20_3487 TPM= 14.01 Transcript Type= NA
chr20	62938119	62948475	62938119	62948475	+	ENST00000266069.4@GID8	ENST00000266069.4	protein_coding	62938119,62941491,62942987,62943495,62944739	62938253,62941620,62943183,62943692,62948475	Gene ID= ENSG00000101193.7 TPM= 28.02 Transcript Type= protein_coding
chr20	62952647	62969585	62952647	62969585	+	ENST00000370351.8@SLC17A9	ENST00000370351.8	protein_coding	62952647,62956765,62957441,62960504,62962624,62963273,62963584,62964228,62965132,62965610,62966525,62966703,62967337	62952889,62956962,62957580,62960603,62962754,62963369,62963680,62964315,62965166,62965725,62966580,62966732,62969585	Gene ID= ENSG00000101194.17 TPM= 2.57 Transcript Type= protein_coding
chr20	62952711	62968597	62952711	62968597	+	transcript3506.chr20.nic@SLC17A9	transcript3506.chr20.nic	protein_coding	62952711,62956765,62957441,62960504,62962624,62963273,62963584,62965132,62965610,62966525,62966703,62967337	62952889,62956962,62957580,62960603,62962734,62963369,62964315,62965166,62965725,62966580,62966732,62968597	Gene ID= ENSG00000101194.17 TPM= 4.32 Transcript Type= NA
chr20	62952757	62968597	62952757	62968597	+	transcript3510.chr20.nic@SLC17A9	transcript3510.chr20.nic	protein_coding	62952757,62956765,62957441,62960504,62962624,62963584,62964228,62965132,62965610,62966525,62966703,62967337	62952889,62956962,62957580,62960603,62963369,62963680,62964315,62965166,62965725,62966580,62966732,62968597	Gene ID= ENSG00000101194.17 TPM= 10.74 Transcript Type= NA
chr20	62952645	62968597	62952645	62968597	+	transcript3514.chr20.nic@SLC17A9	transcript3514.chr20.nic	protein_coding	62952645,62956765,62957441,62960504,62962624,62963584,62965132,62965610,62966525,62966703,62967337	62952889,62956962,62957580,62960603,62963369,62964315,62965166,62965725,62966580,62966732,62968597	Gene ID= ENSG00000101194.17 TPM= 16 Transcript Type= NA
chr20	62952707	62968597	62952707	62968597	+	ENST00000370349.7@SLC17A9	ENST00000370349.7	protein_coding	62952707,62953211,62956765,62957441,62960504,62962624,62963273,62963584,62964228,62965132,62965610,62966525,62966703,62967337	62952889,62953272,62956962,62957580,62960603,62962754,62963369,62963680,62964315,62965166,62965725,62966580,62966732,62968597	Gene ID= ENSG00000101194.17 TPM= 1.4 Transcript Type= protein_coding
chr20	63102205	63104386	63102205	63104386	+	ENST00000433161.1@HAR1A	ENST00000433161.1	lincRNA	63102205,63103555	63103254,63104386	Gene ID= ENSG00000225978.3 TPM= 1.17 Transcript Type= lincRNA
chr20	63195429	63216156	63195429	63216156	-	transcript3528.chr20.nic@YTHDF1	transcript3528.chr20.nic	protein_coding	63215577,63213864,63202287,63195429	63216156,63213943,63203807,63196734	Gene ID= ENSG00000149658.17 TPM= 17.51 Transcript Type= NA
chr20	63195429	63216234	63195429	63216234	-	ENST00000370339.7@YTHDF1	ENST00000370339.7	protein_coding	63215866,63215577,63213864,63202287,63195429	63216234,63215601,63213943,63203807,63196734	Gene ID= ENSG00000149658.17 TPM= 158.79 Transcript Type= protein_coding
chr20	63235435	63240495	63235435	63240495	+	transcript3531.chr20.nnic@BIRC7	transcript3531.chr20.nnic	protein_coding	63235435,63236549,63238396,63238569,63239162,63239358,63240256	63236445,63238002,63238477,63238614,63239233,63239610,63240495	Gene ID= ENSG00000101197.12 TPM= 2.92 Transcript Type= NA
chr20	63235883	63240507	63235883	63240507	+	ENST00000217169.7@BIRC7	ENST00000217169.7	protein_coding	63235883,63237903,63238396,63238569,63239162,63239358,63240256	63236445,63238002,63238477,63238614,63239233,63239610,63240507	Gene ID= ENSG00000101197.12 TPM= 4.67 Transcript Type= protein_coding
chr20	63235883	63240495	63235883	63240495	+	ENST00000342412.10@BIRC7	ENST00000342412.10	protein_coding	63235883,63237903,63238396,63238569,63239162,63239412,63240256	63236445,63238002,63238477,63238614,63239233,63239610,63240495	Gene ID= ENSG00000101197.12 TPM= 5.84 Transcript Type= protein_coding
chr20	63235930	63240495	63235930	63240495	+	transcript3537.chr20.nnic@BIRC7	transcript3537.chr20.nnic	protein_coding	63235930,63236549,63238396,63238569,63239162,63240256	63236445,63238002,63238477,63238614,63239610,63240495	Gene ID= ENSG00000101197.12 TPM= 6.42 Transcript Type= NA
chr20	63235893	63240495	63235893	63240495	+	transcript3538.chr20.nic@BIRC7	transcript3538.chr20.nic	protein_coding	63235893,63237903,63238396,63238569,63239162,63240256	63236445,63238002,63238477,63238614,63239610,63240495	Gene ID= ENSG00000101197.12 TPM= 7.01 Transcript Type= NA
chr20	63235911	63240495	63235911	63240495	+	transcript3543.chr20.nic@BIRC7	transcript3543.chr20.nic	protein_coding	63235911,63238396,63238569,63239162,63240256	63238002,63238477,63238614,63239610,63240495	Gene ID= ENSG00000101197.12 TPM= 6.42 Transcript Type= NA
chr20	63272787	63289788	63272787	63289788	+	transcript3547.chr20.nic@ARFGAP1	transcript3547.chr20.nic	protein_coding	63272787,63275577,63276091,63276480,63277205,63278117,63278899,63281291,63282819,63284866,63285654,63286366,63287564,63289678	63272920,63275640,63276200,63276651,63277305,63278203,63278995,63281347,63282851,63284922,63285713,63286442,63289496,63289788	Gene ID= ENSG00000101199.12 TPM= 7.94 Transcript Type= NA
chr20	63272785	63289793	63272785	63289793	+	ENST00000370283.8@ARFGAP1	ENST00000370283.8	protein_coding	63272785,63275577,63276091,63276480,63277205,63278117,63278899,63281291,63282819,63284866,63285654,63286366,63287564	63272920,63275640,63276200,63276651,63277305,63278203,63278995,63281347,63282851,63284922,63285713,63286442,63289793	Gene ID= ENSG00000101199.12 TPM= 78.29 Transcript Type= protein_coding
chr20	63272785	63289789	63272785	63289789	+	ENST00000519604.5@ARFGAP1	ENST00000519604.5	protein_coding	63272785,63275577,63276480,63277205,63278117,63278899,63281291,63282819,63283851,63284866,63285654,63286372,63287564	63272920,63275640,63276651,63277305,63278203,63278995,63281347,63282851,63283880,63284922,63285713,63286442,63289789	Gene ID= ENSG00000101199.12 TPM= 14.07 Transcript Type= protein_coding
chr20	63272787	63289788	63272787	63289788	+	transcript3556.chr20.nic@ARFGAP1	transcript3556.chr20.nic	protein_coding	63272787,63275577,63276091,63276480,63277205,63278117,63281291,63282819,63284866,63285654,63286366,63287564	63272920,63275640,63276200,63276651,63277305,63278995,63281347,63282851,63284922,63285713,63286442,63289788	Gene ID= ENSG00000101199.12 TPM= 14.07 Transcript Type= NA
chr20	63272833	63289788	63272833	63289788	+	ENST00000370275.8@ARFGAP1	ENST00000370275.8	protein_coding	63272833,63275577,63276091,63276480,63277205,63278117,63278899,63281291,63282819,63284866,63285654,63285980,63286366,63287564	63272920,63275640,63276200,63276651,63277305,63278203,63278995,63281347,63282851,63284922,63285713,63286218,63286442,63289788	Gene ID= ENSG00000101199.12 TPM= 10.57 Transcript Type= protein_coding
chr20	63488013	63499315	63488013	63499315	-	ENST00000217182.4@EEF1A2	ENST00000217182.4	protein_coding	63499058,63497620,63495856,63494805,63493137,63490479,63488918,63488013	63499315,63497834,63496035,63495101,63493287,63490735,63489152,63488425	Gene ID= ENSG00000101210.10 TPM= 2.34 Transcript Type= protein_coding
chr20	63517258	63520592	63517258	63520592	-	transcript3571.chr20.nnic@NA	transcript3571.chr20.nnic	NA	63518472,63517258	63520592,63517745	Gene ID= novel_gene_chr20_3572 TPM= 3.5 Transcript Type= NA
chr20	63520724	63522206	63520724	63522206	+	ENST00000370179.7@PPDPF	ENST00000370179.7	protein_coding	63520724,63521284,63521512,63521668	63520894,63521363,63521589,63522206	Gene ID= ENSG00000125534.9 TPM= 89.9 Transcript Type= protein_coding
chr20	63528001	63537354	63528001	63537354	-	ENST00000542869.2@PTK6	ENST00000542869.2	protein_coding	63537085,63534938,63534152,63533551,63532526,63530746,63530078,63528001	63537354,63535059,63534315,63533704,63532687,63530927,63530231,63529723	Gene ID= ENSG00000101213.6 TPM= 2.34 Transcript Type= protein_coding
chr20	63553715	63556668	63553715	63556668	+	ENST00000615526.1@FNDC11	ENST00000615526.1	protein_coding	63553715	63556668	Gene ID= ENSG00000125531.6 TPM= 2.34 Transcript Type= protein_coding
chr20	63558086	63565757	63558086	63565757	-	transcript3575.chr20.nnic@HELZ2	transcript3575.chr20.nnic	protein_coding	63562522,63562288,63562068,63561823,63561601,63561350,63561082,63560795,63560479,63560165,63559928,63558086	63565757,63562388,63562203,63561984,63561745,63561466,63561274,63560929,63560697,63560327,63560090,63559370	Gene ID= ENSG00000130589.16 TPM= 15.18 Transcript Type= NA
chr20	63570126	63574239	63570126	63574239	-	ENST00000479540.5@HELZ2	ENST00000479540.5	protein_coding	63574184,63570685,63570126	63574239,63573221,63570611	Gene ID= ENSG00000130589.16 TPM= 2.34 Transcript Type= processed_transcript
chr20	63587602	63627041	63587602	63627041	-	ENST00000370077.1@GMEB2	ENST00000370077.1	protein_coding	63626956,63619267,63604743,63602965,63597757,63595610,63593011,63592533,63592022,63587602	63627041,63619454,63604840,63603092,63597860,63595767,63593082,63592670,63592144,63590729	Gene ID= ENSG00000101216.10 TPM= 42.03 Transcript Type= protein_coding
chr20	63626857	63628707	63626857	63628707	+	transcript3582.chr20.nnic@NA	transcript3582.chr20.nnic	NA	63626857	63628707	Gene ID= novel_gene_chr20_3583 TPM= 16.35 Transcript Type= NA
chr20	63639708	63653427	63639708	63653427	-	ENST00000370053.2@STMN3	ENST00000370053.2	protein_coding	63653327,63644214,63643756,63642108,63639708	63653427,63644309,63643931,63642299,63641397	Gene ID= ENSG00000197457.9 TPM= 28.02 Transcript Type= protein_coding
chr20	63657810	63696253	63657810	63696253	+	ENST00000370018.7@RTEL1	ENST00000370018.7	protein_coding	63657810,63659233,63661298,63661850,63662546,63662829,63666004,63667469,63672556,63673940,63678145,63678268,63679849,63680664,63685523,63685791,63687638,63687937,63688139,63688301,63688528,63689055,63689502,63689750,63690087,63690294,63690805,63691742,63692805,63693143,63694372,63694741,63695066,63695328,63695778	63658466,63659504,63661496,63661943,63662627,63662889,63666079,63667553,63672621,63674093,63678183,63678346,63679946,63680719,63685597,63685872,63687770,63688050,63688179,63688386,63688605,63689132,63689648,63689865,63690210,63690441,63690947,63691837,63693003,63693283,63694488,63694974,63695221,63695480,63696253	Gene ID= ENSG00000258366.7 TPM= 2.34 Transcript Type= protein_coding
chr20	63658312	63696253	63658312	63696253	+	ENST00000360203.9@RTEL1	ENST00000360203.9	protein_coding	63658312,63659233,63661298,63661850,63662546,63662829,63666004,63667469,63672556,63673940,63678145,63678268,63679849,63680664,63685523,63685791,63687638,63687937,63688139,63688301,63688528,63689055,63689502,63689750,63690087,63690294,63690805,63691742,63692805,63693143,63694372,63694741,63695066,63695328,63695778	63658466,63659504,63661496,63661943,63662627,63662889,63666079,63667553,63672621,63674093,63678183,63678346,63679946,63680719,63685597,63685872,63687770,63688050,63688179,63688386,63688605,63689132,63689648,63689865,63690210,63690441,63690947,63691837,63693003,63693283,63694488,63694974,63695221,63695650,63696253	Gene ID= ENSG00000258366.7 TPM= 10.51 Transcript Type= protein_coding
chr20	63696652	63698655	63696652	63698655	+	transcript3642.chr20.nnic@RTEL1-TNFRSF6B	transcript3642.chr20.nnic	protein_coding	63696652,63698280	63697191,63698655	Gene ID= ENSG00000026036.21 TPM= 4.67 Transcript Type= NA
chr20	63696650	63698682	63696650	63698682	+	transcript3645.chr20.nnic@NA	transcript3645.chr20.nnic	NA	63696650	63698682	Gene ID= novel_gene_chr20_3646 TPM= 28.02 Transcript Type= NA
chr20	63696652	63698684	63696652	63698684	+	transcript3643.chr20.nic@TNFRSF6B	transcript3643.chr20.nic	protein_coding	63696652,63698280	63697522,63698684	Gene ID= ENSG00000243509.4 TPM= 6.42 Transcript Type= NA
chr20	63696668	63698684	63696668	63698684	+	ENST00000369996.1@TNFRSF6B	ENST00000369996.1	protein_coding	63696668,63697328,63698280	63697191,63697522,63698684	Gene ID= ENSG00000243509.4 TPM= 23.94 Transcript Type= protein_coding
chr20	63698643	63708013	63698643	63708013	-	ENST00000622789.4@ARFRP1	ENST00000622789.4	protein_coding	63707867,63706999,63706651,63706357,63702136,63701830,63700602,63698643	63708013,63707097,63706738,63706439,63702217,63701900,63700702,63700530	Gene ID= ENSG00000101246.19 TPM= 7.01 Transcript Type= protein_coding
chr20	63699497	63707879	63699497	63707879	-	transcript3606.chr20.nnic@ARFRP1	transcript3606.chr20.nnic	protein_coding	63707661,63706999,63706651,63706357,63702136,63701830,63700602,63699497	63707879,63707092,63706738,63706439,63702217,63701900,63700702,63700530	Gene ID= ENSG00000101246.19 TPM= 3.5 Transcript Type= NA
chr20	63699478	63707993	63699478	63707993	-	transcript3621.chr20.nic@ARFRP1	transcript3621.chr20.nic	protein_coding	63707867,63706999,63706651,63706357,63702136,63701830,63699478	63707993,63707092,63706738,63706439,63702217,63701900,63700702	Gene ID= ENSG00000101246.19 TPM= 3.5 Transcript Type= NA
chr20	63699456	63707838	63699456	63707838	-	ENST00000618838.4@ARFRP1	ENST00000618838.4	protein_coding	63707810,63706999,63706651,63706357,63702136,63701830,63700602,63699456	63707838,63707092,63706738,63706439,63702217,63701900,63700702,63700530	Gene ID= ENSG00000101246.19 TPM= 17.51 Transcript Type= protein_coding
chr20	63699478	63707916	63699478	63707916	-	ENST00000612157.4@ARFRP1	ENST00000612157.4	protein_coding	63707867,63706999,63706651,63706357,63702136,63701830,63699478	63707916,63707097,63706738,63706439,63702217,63701900,63700702	Gene ID= ENSG00000101246.19 TPM= 5.84 Transcript Type= protein_coding
chr20	63708035	63736142	63708035	63736142	+	ENST00000355969.10@ZGPAT	ENST00000355969.10	protein_coding	63708035,63708553,63733219,63733587,63734705,63735159,63735781	63708118,63709164,63733352,63733739,63734824,63735564,63736142	Gene ID= ENSG00000197114.11 TPM= 32.02 Transcript Type= protein_coding
chr20	63708053	63736142	63708053	63736142	+	ENST00000357119.8@ZGPAT	ENST00000357119.8	protein_coding	63708053,63708553,63733219,63733587,63734705,63735159,63735781	63708188,63709164,63733352,63733712,63734824,63735564,63736142	Gene ID= ENSG00000197114.11 TPM= 2.83 Transcript Type= protein_coding
chr20	63708038	63736142	63708038	63736142	+	transcript3626.chr20.nic@ZGPAT	transcript3626.chr20.nic	protein_coding	63708038,63708553,63733219,63733587,63735159,63735781	63708188,63709164,63733352,63734824,63735564,63736142	Gene ID= ENSG00000197114.11 TPM= 6.04 Transcript Type= NA
chr20	63708039	63736141	63708039	63736141	+	ENST00000477340.5@ZGPAT	ENST00000477340.5	protein_coding	63708039,63708553,63733219,63733587,63735159,63735781	63708118,63709164,63733352,63734824,63735564,63736141	Gene ID= ENSG00000197114.11 TPM= 10.51 Transcript Type= retained_intron
chr20	63708039	63736142	63708039	63736142	+	transcript3637.chr20.nic@ZGPAT	transcript3637.chr20.nic	protein_coding	63708039,63708553,63733219,63735781	63708118,63709164,63735564,63736142	Gene ID= ENSG00000197114.11 TPM= 4.87 Transcript Type= NA
chr20	63708086	63736142	63708086	63736142	+	ENST00000369967.7@ZGPAT	ENST00000369967.7	protein_coding	63708086,63708553,63733219,63733587,63734705,63735159,63735781	63708188,63709164,63733352,63733739,63734824,63735564,63736142	Gene ID= ENSG00000197114.11 TPM= 2.83 Transcript Type= protein_coding
chr20	63708052	63736142	63708052	63736142	+	transcript3629.chr20.nic@AL121845.3	transcript3629.chr20.nic	protein_coding	63708052,63733219,63733587,63734705,63735159,63735781	63709164,63733352,63733739,63734824,63735564,63736142	Gene ID= ENSG00000273154.3 TPM= 8.66 Transcript Type= NA
chr20	63736643	63739103	63736643	63739103	+	ENST00000309546.7@LIME1	ENST00000309546.7	protein_coding	63736643,63737533,63737821,63737973,63738183,63738598	63736712,63737647,63737902,63738060,63738499,63739103	Gene ID= ENSG00000203896.9 TPM= 5.84 Transcript Type= protein_coding
chr20	63740244	63745951	63740244	63745951	+	transcript3654.chr20.nic@SLC2A4RG	transcript3654.chr20.nic	protein_coding	63740244,63741370,63741869,63742130,63742336,63742699,63742879,63745528	63740531,63741479,63742056,63742230,63742615,63742790,63744728,63745951	Gene ID= ENSG00000125520.13 TPM= 2.34 Transcript Type= NA
chr20	63739778	63743505	63739778	63743505	+	transcript3656.chr20.nic@SLC2A4RG	transcript3656.chr20.nic	protein_coding	63739778,63740377,63741370,63741869,63742130,63742336,63742879	63740038,63740531,63741479,63742056,63742230,63742790,63743505	Gene ID= ENSG00000125520.13 TPM= 6.13 Transcript Type= NA
chr20	63739747	63743505	63739747	63743505	+	transcript3657.chr20.nic@SLC2A4RG	transcript3657.chr20.nic	protein_coding	63739747,63740377,63741370,63741869,63742130,63742699,63742879	63740038,63740531,63741479,63742056,63742615,63742790,63743505	Gene ID= ENSG00000125520.13 TPM= 5.35 Transcript Type= NA
chr20	63739861	63743505	63739861	63743505	+	ENST00000266077.4@SLC2A4RG	ENST00000266077.4	protein_coding	63739861,63740377,63741370,63741869,63742130,63742336,63742699,63742879	63740038,63740531,63741479,63742056,63742230,63742615,63742790,63743505	Gene ID= ENSG00000125520.13 TPM= 21.69 Transcript Type= protein_coding
chr20	63774692	63831298	63774692	63831298	-	transcript3670.chr20.nic@ZBTB46	transcript3670.chr20.nic	protein_coding	63831097,63789821,63774692	63831298,63790790,63775962	Gene ID= ENSG00000130584.10 TPM= 5.84 Transcript Type= NA
chr20	63861212	63864293	63861212	63864293	-	ENST00000601296.2@AL118506.1	ENST00000601296.2	antisense_RNA	63861212	63864293	Gene ID= ENSG00000268858.2 TPM= 22.18 Transcript Type= antisense_RNA
chr20	63865290	63891545	63865290	63891545	+	ENST00000346249.8@TPD52L2	ENST00000346249.8	protein_coding	63865290,63869296,63873668,63875816,63882719,63889190,63889850	63865384,63869441,63873816,63875875,63882820,63889238,63891545	Gene ID= ENSG00000101150.17 TPM= 208.22 Transcript Type= protein_coding
chr20	63865290	63891545	63865290	63891545	+	ENST00000348257.9@TPD52L2	ENST00000348257.9	protein_coding	63865290,63869296,63873668,63882719,63889190,63889850	63865384,63869441,63873816,63882820,63889238,63891545	Gene ID= ENSG00000101150.17 TPM= 42.42 Transcript Type= protein_coding
chr20	63886367	63889565	63886367	63889565	-	transcript3696.chr20.nnic@NA	transcript3696.chr20.nnic	NA	63886367	63889565	Gene ID= novel_gene_chr20_3697 TPM= 2.34 Transcript Type= NA
chr20	63895182	63936031	63895182	63936031	+	ENST00000360864.8@DNAJC5	ENST00000360864.8	protein_coding	63895182,63928335,63929312,63930851,63931465	63895323,63928452,63929525,63931022,63936031	Gene ID= ENSG00000101152.10 TPM= 98.08 Transcript Type= protein_coding
chr20	63939829	63956414	63939829	63956414	-	transcript3698.chr20.nnic@UCKL1	transcript3698.chr20.nnic	protein_coding	63956260,63946453,63946161,63945805,63945651,63944545,63944397,63942470,63941110,63940950,63940794,63940594,63940378,63940150,63939829	63956414,63946643,63946267,63945975,63945722,63944734,63944458,63942489,63941208,63941043,63940856,63940716,63940485,63940306,63940055	Gene ID= ENSG00000198276.15 TPM= 5.29 Transcript Type= NA
chr20	63939829	63941848	63939829	63941848	-	transcript3711.chr20.nnic@UCKL1	transcript3711.chr20.nnic	protein_coding	63941136,63940950,63940794,63940594,63940378,63940150,63939829	63941848,63941043,63940856,63940716,63940485,63940306,63940055	Gene ID= ENSG00000198276.15 TPM= 7.62 Transcript Type= NA
chr20	63939829	63941580	63939829	63941580	-	transcript3712.chr20.nic@UCKL1	transcript3712.chr20.nic	protein_coding	63940950,63940794,63940594,63940378,63940150,63939829	63941580,63940856,63940716,63940485,63940306,63940055	Gene ID= ENSG00000198276.15 TPM= 5.29 Transcript Type= NA
chr20	63939829	63941581	63939829	63941581	-	transcript3714.chr20.nic@UCKL1	transcript3714.chr20.nic	protein_coding	63940950,63940378,63940150,63939829	63941581,63940856,63940306,63940055	Gene ID= ENSG00000198276.15 TPM= 3.89 Transcript Type= NA
chr20	63939829	63956415	63939829	63956415	-	ENST00000354216.10@UCKL1	ENST00000354216.10	protein_coding	63956260,63946453,63946161,63945805,63945651,63944545,63944397,63943653,63941110,63940950,63940794,63940594,63940378,63940150,63939829	63956415,63946643,63946267,63945975,63945722,63944734,63944458,63943669,63941208,63941043,63940856,63940716,63940485,63940306,63940055	Gene ID= ENSG00000198276.15 TPM= 122.05 Transcript Type= protein_coding
chr20	63956702	63969865	63956702	63969865	-	ENST00000369888.5@ZNF512B	ENST00000369888.5	protein_coding	63969814,63967830,63967381,63966876,63966141,63964490,63964320,63964071,63963789,63963618,63963342,63963095,63962587,63962273,63961942,63961309,63956702	63969865,63967952,63967523,63967004,63966781,63964716,63964391,63964217,63963913,63963710,63963440,63963265,63962781,63962374,63962004,63961407,63960139	Gene ID= ENSG00000196700.8 TPM= 36.2 Transcript Type= protein_coding
chr20	63974113	63979631	63974113	63979631	-	transcript3739.chr20.nic@SAMD10	transcript3739.chr20.nic	protein_coding	63978245,63977225,63976971,63975692,63974113	63979631,63977406,63977142,63975832,63975532	Gene ID= ENSG00000130590.13 TPM= 3.5 Transcript Type= NA
chr20	63974113	63979642	63974113	63979642	-	ENST00000369886.7@SAMD10	ENST00000369886.7	protein_coding	63979377,63977225,63976971,63975692,63974113	63979642,63977406,63977142,63975832,63975532	Gene ID= ENSG00000130590.13 TPM= 3.5 Transcript Type= protein_coding
chr20	63981135	64033100	63981135	64033100	+	ENST00000266079.4@PRPF6	ENST00000266079.4	protein_coding	63981135,63983047,63984907,63993407,63994916,63995327,63999045,63999603,64001077,64010200,64011285,64016723,64022757,64024555,64025939,64026982,64027603,64028478,64029377,64031918,64032841	63981316,63983215,63985025,63993485,63995092,63995482,63999139,63999759,64001239,64010318,64011503,64016845,64022878,64024693,64026058,64027158,64027736,64028569,64029491,64032044,64033100	Gene ID= ENSG00000101161.7 TPM= 375.97 Transcript Type= protein_coding
chr20	64002647	64007369	64002647	64007369	-	transcript3741.chr20.nnic@NA	transcript3741.chr20.nnic	NA	64002647	64007369	Gene ID= novel_gene_chr20_3742 TPM= 2.34 Transcript Type= NA
chr20	64047582	64049641	64047582	64049641	-	ENST00000340356.8@SOX18	ENST00000340356.8	protein_coding	64049159,64047582	64049641,64048962	Gene ID= ENSG00000203883.6 TPM= 21.02 Transcript Type= protein_coding
chr20	64049787	64072347	64049787	64072347	+	transcript3748.chr20.nic@TCEA2	transcript3748.chr20.nic	protein_coding	64049787,64062430,64066476,64066915,64068047,64069361,64069765,64070260,64070489,64071870,64072172	64050052,64062503,64066538,64067020,64068134,64069491,64069821,64070414,64070635,64071941,64072347	Gene ID= ENSG00000171703.16 TPM= 4.67 Transcript Type= NA
chr20	64063082	64072347	64063082	64072347	+	transcript3752.chr20.nic@TCEA2	transcript3752.chr20.nic	protein_coding	64063082,64066476,64066915,64068047,64069361,64069765,64070260,64070489,64071870,64072172	64063949,64066538,64067020,64068134,64069491,64069821,64070414,64070635,64071941,64072347	Gene ID= ENSG00000171703.16 TPM= 3.5 Transcript Type= NA
chr20	64063196	64064123	64063196	64064123	+	ENST00000476113.1@TCEA2	ENST00000476113.1	protein_coding	64063196,64063892	64063384,64064123	Gene ID= ENSG00000171703.16 TPM= 1.17 Transcript Type= processed_transcript
chr20	64057293	64072346	64057293	64072346	+	ENST00000361317.6@TCEA2	ENST00000361317.6	protein_coding	64057293,64062430,64066476,64066915,64068047,64069361,64069765,64070260,64070489,64071870,64072172	64057651,64062503,64066538,64067020,64068134,64069491,64069821,64070414,64070635,64071941,64072346	Gene ID= ENSG00000171703.16 TPM= 1.75 Transcript Type= protein_coding
chr20	64063144	64072346	64063144	64072346	+	ENST00000343484.9@TCEA2	ENST00000343484.9	protein_coding	64063144,64066476,64066915,64068047,64069361,64069765,64070260,64070489,64071870,64072172	64063384,64066538,64067020,64068134,64069491,64069821,64070414,64070635,64071941,64072346	Gene ID= ENSG00000171703.16 TPM= 36.78 Transcript Type= protein_coding
chr20	64059137	64061130	64059137	64061130	-	transcript3768.chr20.nnic@NA	transcript3768.chr20.nnic	NA	64059137	64061130	Gene ID= novel_gene_chr20_3769 TPM= 4.67 Transcript Type= NA
chr20	64073181	64079907	64073181	64079907	-	transcript3778.chr20.nic@RGS19	transcript3778.chr20.nic	protein_coding	64079294,64076525,64074467,64074144,64073181	64079907,64076646,64074541,64074378,64074044	Gene ID= ENSG00000171700.13 TPM= 27.67 Transcript Type= NA
chr20	64073181	64079492	64073181	64079492	-	ENST00000395042.1@RGS19	ENST00000395042.1	protein_coding	64079294,64076857,64076525,64074467,64074144,64073181	64079492,64076954,64076646,64074541,64074378,64074044	Gene ID= ENSG00000171700.13 TPM= 58.61 Transcript Type= protein_coding
chr20	64073181	64079988	64073181	64079988	-	ENST00000332298.9@RGS19	ENST00000332298.9	protein_coding	64079873,64076857,64076525,64074467,64074144,64073181	64079988,64076954,64076646,64074541,64074378,64074044	Gene ID= ENSG00000171700.13 TPM= 23.59 Transcript Type= protein_coding
chr20	64255739	64276027	64255739	64276027	+	transcript3799.chr20.nic@PCMTD2	transcript3799.chr20.nic	protein_coding	64255739,64259942,64264429,64265258,64267887,64273221	64255924,64260272,64264531,64265429,64268010,64276027	Gene ID= ENSG00000203880.11 TPM= 3.5 Transcript Type= NA
chr20	64255801	64275653	64255801	64275653	+	transcript3801.chr20.nic@PCMTD2	transcript3801.chr20.nic	protein_coding	64255801,64259942,64264429,64265258,64267887,64273221	64257051,64260272,64264531,64265429,64268010,64275653	Gene ID= ENSG00000203880.11 TPM= 6.42 Transcript Type= NA
chr20	64255884	64275653	64255884	64275653	+	transcript3803.chr20.nic@PCMTD2	transcript3803.chr20.nic	protein_coding	64255884,64259942,64264429,64265258,64267968,64273221	64257051,64260272,64264531,64265429,64268010,64275653	Gene ID= ENSG00000203880.11 TPM= 2.34 Transcript Type= NA
chr20	64255768	64276230	64255768	64276230	+	ENST00000308824.10@PCMTD2	ENST00000308824.10	protein_coding	64255768,64259942,64264429,64265258,64267887,64273221	64255870,64260272,64264531,64265429,64268010,64276230	Gene ID= ENSG00000203880.11 TPM= 10.51 Transcript Type= protein_coding
chr20	64255741	64275653	64255741	64275653	+	ENST00000369758.8@PCMTD2	ENST00000369758.8	protein_coding	64255741,64259942,64264429,64265258,64267968,64273221	64255870,64260272,64264531,64265429,64268010,64275653	Gene ID= ENSG00000203880.11 TPM= 5.84 Transcript Type= protein_coding
chr21	5116343	5128462	5116343	5128462	-	transcript12.chr21.nnic@FP565260.6	transcript12.chr21.nnic	protein_coding	5128411,5127898,5125879,5124756,5121711,5118691,5116343	5128462,5127950,5125992,5124875,5121803,5118847,5117231	Gene ID= ENSG00000280071.3 TPM= 6.04 Transcript Type= NA
chr21	5116343	5128442	5116343	5128442	-	transcript15.chr21.nic@FP565260.6	transcript15.chr21.nic	protein_coding	5128214,5127898,5125879,5121711,5118691,5116343	5128442,5127950,5125992,5124875,5118847,5117231	Gene ID= ENSG00000280071.3 TPM= 20.63 Transcript Type= NA
chr21	5116343	5128442	5116343	5128442	-	transcript17.chr21.nic@FP565260.6	transcript17.chr21.nic	protein_coding	5128214,5127898,5125879,5124756,5121711,5116343	5128442,5127950,5125992,5124875,5121803,5118847	Gene ID= ENSG00000280071.3 TPM= 3.5 Transcript Type= NA
chr21	5116341	5128425	5116341	5128425	-	ENST00000620528.4@FP565260.6	ENST00000620528.4	protein_coding	5128214,5127898,5125879,5124756,5121711,5118691,5116341	5128425,5127950,5125992,5124875,5121803,5118847,5117231	Gene ID= ENSG00000280071.3 TPM= 55.08 Transcript Type= protein_coding
chr21	5130871	5154734	5130871	5154734	-	ENST00000617716.3@FP565260.1	ENST00000617716.3	protein_coding	5154623,5152961,5148210,5147779,5147289,5146658,5146137,5144091,5143222,5142532,5141559,5141277,5140953,5139698,5137327,5135935,5135089,5133902,5133655,5133426,5130871	5154734,5153073,5148304,5147878,5147432,5146793,5146366,5144234,5143292,5142668,5141707,5141424,5141103,5139878,5137474,5136043,5135154,5134120,5133805,5133500,5131455	Gene ID= ENSG00000275464.4 TPM= 37.36 Transcript Type= protein_coding
chr21	6119185	6123739	6119185	6123739	+	transcript25.chr21.nic@CU639417.2	transcript25.chr21.nic	protein_coding	6119185,6120487,6121144	6120001,6120718,6123739	Gene ID= ENSG00000275993.2 TPM= 2.92 Transcript Type= NA
chr21	6111134	6123739	6111134	6123739	+	ENST00000613488.2@CU639417.2	ENST00000613488.2	protein_coding	6111134,6112070,6112739,6116224,6116462,6116894,6117128,6117804,6118256,6118783,6119024,6119720,6120487,6121144	6111252,6112239,6112855,6116287,6116623,6117018,6117251,6118027,6118402,6118908,6119240,6120001,6120718,6123739	Gene ID= ENSG00000275993.2 TPM= 35.61 Transcript Type= protein_coding
chr21	6444869	6467532	6444869	6467532	-	ENST00000398168.5@CBSL	ENST00000398168.5	protein_coding	6467448,6464944,6463663,6460187,6457921,6457294,6457065,6456881,6455578,6454631,6453989,6452119,6450904,6450512,6449823,6448481,6444869	6467532,6465019,6463879,6460293,6458055,6457373,6457199,6456950,6455669,6454756,6454073,6452224,6450981,6450646,6449931,6448565,6445661	Gene ID= ENSG00000274276.4 TPM= 36.2 Transcript Type= protein_coding
chr21	6484624	6499256	6484624	6499256	-	ENST00000639996.1@U2AF1L5	ENST00000639996.1	protein_coding	6499129,6495993,6493044,6492131,6487363,6487107,6486322,6486138,6484624	6499256,6496080,6493110,6492197,6487412,6487205,6486455,6486230,6484916	Gene ID= ENSG00000275895.6 TPM= 4.67 Transcript Type= protein_coding
chr21	6484623	6499200	6484623	6499200	-	ENST00000610664.4@U2AF1L5	ENST00000610664.4	protein_coding	6499129,6495993,6492131,6487363,6487107,6486322,6486138,6484623	6499200,6496080,6492197,6487412,6487205,6486455,6486230,6484916	Gene ID= ENSG00000275895.6 TPM= 37.36 Transcript Type= protein_coding
chr21	6667304	6670695	6667304	6670695	-	ENST00000623324.1@CU638689.4	ENST00000623324.1	lincRNA	6670522,6668152,6667304	6670695,6668254,6667962	Gene ID= ENSG00000280145.3 TPM= 1.17 Transcript Type= lincRNA
chr21	7744971	7772246	7744971	7772246	+	ENST00000622934.3@SMIM11B	ENST00000622934.3	protein_coding	7744971,7748899,7754952,7769187,7771567	7745038,7748987,7755118,7769375,7772246	Gene ID= ENSG00000273590.4 TPM= 1.17 Transcript Type= protein_coding
chr21	7744975	7758627	7744975	7758627	+	ENST00000619874.4@SMIM11B	ENST00000619874.4	protein_coding	7744975,7748899,7754952,7758105	7745038,7748987,7755118,7758627	Gene ID= ENSG00000273590.4 TPM= 5.84 Transcript Type= protein_coding
chr21	8208016	8393188	8208016	8393188	+	transcript38.chr21.nnic@FP671120.1	transcript38.chr21.nnic	lincRNA	8208016,8253305,8392323	8209103,8253502,8393188	Gene ID= ENSG00000278996.1 TPM= 1719.87 Transcript Type= NA
chr21	8219894	8220535	8219894	8220535	-	transcript197.chr21.nnic@NA	transcript197.chr21.nnic	NA	8219894	8220535	Gene ID= novel_gene_chr21_198 TPM= 8.17 Transcript Type= NA
chr21	8395419	8441211	8395419	8441211	-	transcript78.chr21.nnic@FP236383.3	transcript78.chr21.nnic	lincRNA	8439709,8395419	8441211,8395654	Gene ID= ENSG00000281181.1 TPM= 477.55 Transcript Type= NA
chr21	8433222	8437396	8433222	8437396	+	transcript107.chr21.nnic@NA	transcript107.chr21.nnic	NA	8433222	8437396	Gene ID= novel_gene_chr21_108 TPM= 2174.64 Transcript Type= NA
chr21	9068360	9129772	9068360	9129772	-	transcript246.chr21.nnic@TEKT4P2	transcript246.chr21.nnic	transcribed_unprocessed_pseudogene	9129683,9127489,9070214,9069445,9068687,9068360	9129772,9127547,9070444,9069599,9068774,9068589	Gene ID= ENSG00000188681.11 TPM= 2.34 Transcript Type= NA
chr21	9068360	9129772	9068360	9129772	-	transcript251.chr21.nnic@TEKT4P2	transcript251.chr21.nnic	transcribed_unprocessed_pseudogene	9129683,9127489,9070214,9069445,9068360	9129772,9127547,9070444,9069599,9068659	Gene ID= ENSG00000188681.11 TPM= 7.01 Transcript Type= NA
chr21	9076424	9129772	9076424	9129772	-	transcript257.chr21.nnic@TEKT4P2	transcript257.chr21.nnic	transcribed_unprocessed_pseudogene	9129683,9127489,9124362,9076424	9129772,9127547,9124421,9077714	Gene ID= ENSG00000188681.11 TPM= 2.34 Transcript Type= NA
chr21	9117189	9129772	9117189	9129772	-	transcript259.chr21.nnic@TEKT4P2	transcript259.chr21.nnic	transcribed_unprocessed_pseudogene	9129683,9127489,9120855,9117189	9129772,9127547,9121378,9118225	Gene ID= ENSG00000188681.11 TPM= 2.34 Transcript Type= NA
chr21	9068360	9129772	9068360	9129772	-	transcript265.chr21.nic@TEKT4P2	transcript265.chr21.nic	transcribed_unprocessed_pseudogene	9129683,9127489,9068360	9129772,9127547,9070444	Gene ID= ENSG00000188681.11 TPM= 18.68 Transcript Type= NA
chr21	9076424	9129772	9076424	9129772	-	transcript266.chr21.nnic@TEKT4P2	transcript266.chr21.nnic	transcribed_unprocessed_pseudogene	9129683,9127489,9076424	9129772,9127547,9077714	Gene ID= ENSG00000188681.11 TPM= 21.02 Transcript Type= NA
chr21	9117174	9129772	9117174	9129772	-	transcript273.chr21.nnic@TEKT4P2	transcript273.chr21.nnic	transcribed_unprocessed_pseudogene	9129683,9127489,9117174	9129772,9127547,9121378	Gene ID= ENSG00000188681.11 TPM= 4.09 Transcript Type= NA
chr21	9068361	9129752	9068361	9129752	-	ENST00000416067.5@TEKT4P2	ENST00000416067.5	transcribed_unprocessed_pseudogene	9129683,9127489,9070214,9068361	9129752,9127547,9070444,9069599	Gene ID= ENSG00000188681.11 TPM= 11.68 Transcript Type= processed_transcript
chr21	9073826	9076522	9073826	9076522	+	transcript278.chr21.nnic@NA	transcript278.chr21.nnic	NA	9073826	9076522	Gene ID= novel_gene_chr21_279 TPM= 8.17 Transcript Type= NA
chr21	9080578	9082415	9080578	9082415	+	transcript280.chr21.nnic@NA	transcript280.chr21.nnic	NA	9080578	9082415	Gene ID= novel_gene_chr21_281 TPM= 3.5 Transcript Type= NA
chr21	13934254	13936376	13934254	13936376	-	transcript289.chr21.nnic@NA	transcript289.chr21.nnic	NA	13934254	13936376	Gene ID= novel_gene_chr21_290 TPM= 2.34 Transcript Type= NA
chr21	14216178	14228372	14216178	14228372	+	ENST00000400577.3@RBM11	ENST00000400577.3	protein_coding	14216178,14219563,14221097,14224438,14226880	14216282,14219725,14221169,14224537,14228372	Gene ID= ENSG00000185272.13 TPM= 1.17 Transcript Type= protein_coding
chr21	14371115	14383187	14371115	14383187	-	ENST00000285667.3@HSPA13	ENST00000285667.3	protein_coding	14383095,14381203,14378199,14375652,14371115	14383187,14381543,14378412,14375819,14374284	Gene ID= ENSG00000155304.5 TPM= 23.35 Transcript Type= protein_coding
chr21	14485228	14546343	14485228	14546343	-	ENST00000400566.5@SAMSN1	ENST00000400566.5	protein_coding	14546205,14521150,14516892,14512444,14510310,14500529,14498442,14485228	14546343,14521221,14517041,14512573,14510461,14500735,14498592,14486114	Gene ID= ENSG00000155307.17 TPM= 19.85 Transcript Type= protein_coding
chr21	14728396	14744604	14728396	14744604	-	transcript302.chr21.nnic@NA	transcript302.chr21.nnic	NA	14744454,14740253,14728396	14744604,14740398,14729335	Gene ID= novel_gene_chr21_303 TPM= 2.34 Transcript Type= NA
chr21	14818843	15014430	14818843	15014430	-	ENST00000432230.6@AF127577.4	ENST00000432230.6	lincRNA	15014344,14857542,14825523,14818843	15014430,14857708,14825624,14824415	Gene ID= ENSG00000235609.7 TPM= 1.17 Transcript Type= lincRNA
chr21	15012448	15064998	15012448	15064998	-	transcript315.chr21.nic@NRIP1	transcript315.chr21.nic	protein_coding	15064745,15043495,15012448	15064998,15043574,15014466	Gene ID= ENSG00000180530.10 TPM= 2.34 Transcript Type= NA
chr21	15008161	15010397	15008161	15010397	+	transcript316.chr21.nnic@NA	transcript316.chr21.nnic	NA	15008161	15010397	Gene ID= novel_gene_chr21_317 TPM= 3.5 Transcript Type= NA
chr21	15729921	15878911	15729921	15878911	+	transcript318.chr21.nnic@USP25	transcript318.chr21.nnic	protein_coding	15729921,15762891,15765997,15777904,15791502,15799757,15805121,15808809,15811137,15818698,15822288,15824039,15824966,15826204,15826977,15830531,15831401,15833348,15842398,15864268,15866266,15870068,15874403,15877796,15878303	15730438,15762968,15766141,15778027,15791664,15799843,15805258,15808885,15811210,15818846,15822411,15824166,15825061,15826365,15827203,15830601,15831629,15833548,15842540,15864446,15866344,15870147,15874526,15877991,15878911	Gene ID= ENSG00000155313.15 TPM= 3.5 Transcript Type= NA
chr21	15729962	15878911	15729962	15878911	+	transcript327.chr21.nnic@USP25	transcript327.chr21.nnic	protein_coding	15729962,15762891,15765997,15777904,15791502,15799757,15805121,15808809,15811137,15818698,15824039,15824966,15826204,15826977,15830531,15831401,15833348,15842398,15864268,15866266,15870068,15874403,15877796,15878303	15730688,15762968,15766141,15778027,15791664,15799843,15805258,15808885,15811210,15818846,15824166,15825061,15826365,15827203,15830601,15831629,15833548,15842540,15864446,15866344,15870147,15874526,15877991,15878911	Gene ID= ENSG00000155313.15 TPM= 3.5 Transcript Type= NA
chr21	15730025	15878911	15730025	15878911	+	ENST00000285679.10@USP25	ENST00000285679.10	protein_coding	15730025,15762891,15765997,15777904,15791502,15799757,15805121,15808809,15811137,15818698,15824039,15824966,15826204,15826977,15830531,15831401,15833348,15842398,15864268,15866266,15870068,15874403,15877796,15878303	15730438,15762968,15766141,15778027,15791664,15799843,15805258,15808885,15811210,15818846,15824166,15825061,15826365,15827203,15830601,15831629,15833548,15842540,15864446,15866344,15870147,15874526,15877991,15878911	Gene ID= ENSG00000155313.15 TPM= 24.52 Transcript Type= protein_coding
chr21	15730978	15735085	15730978	15735085	-	transcript341.chr21.nnic@NA	transcript341.chr21.nnic	NA	15730978	15735085	Gene ID= novel_gene_chr21_342 TPM= 32.69 Transcript Type= NA
chr21	15783945	15785814	15783945	15785814	+	transcript339.chr21.nnic@NA	transcript339.chr21.nnic	NA	15783945	15785814	Gene ID= novel_gene_chr21_340 TPM= 2.34 Transcript Type= NA
chr21	16632174	16636885	16632174	16636885	-	transcript343.chr21.nnic@NA	transcript343.chr21.nnic	NA	16632174	16636885	Gene ID= novel_gene_chr21_344 TPM= 2.34 Transcript Type= NA
chr21	17513047	17570096	17513047	17570096	+	transcript347.chr21.nnic@CXADR	transcript347.chr21.nnic	protein_coding	17513047,17547027,17551749,17558976,17560702,17561338,17565428,17568150	17513172,17547193,17551953,17559131,17560824,17561476,17565611,17570096	Gene ID= ENSG00000154639.18 TPM= 7.01 Transcript Type= NA
chr21	17512382	17570100	17512382	17570100	+	ENST00000284878.11@CXADR	ENST00000284878.11	protein_coding	17512382,17547027,17551749,17558976,17560702,17561338,17565428	17513172,17547193,17551953,17559131,17560824,17561476,17570100	Gene ID= ENSG00000154639.18 TPM= 101.58 Transcript Type= protein_coding
chr21	17513022	17550367	17513022	17550367	+	transcript366.chr21.nic@CXADR	transcript366.chr21.nic	protein_coding	17513022,17547027	17513172,17550367	Gene ID= ENSG00000154639.18 TPM= 2.34 Transcript Type= NA
chr21	17513130	17593579	17513130	17593579	+	ENST00000400169.1@CXADR	ENST00000400169.1	protein_coding	17513130,17547027,17551749,17558976,17560702,17561338,17565428,17593152	17513172,17547193,17551953,17559131,17560824,17561476,17565611,17593579	Gene ID= ENSG00000154639.18 TPM= 2.34 Transcript Type= protein_coding
chr21	17593653	17612897	17593653	17612897	-	transcript361.chr21.nic@BTG3	transcript361.chr21.nic	protein_coding	17612699,17611657,17608972,17604860,17598617,17593653	17612897,17611774,17609152,17604997,17598824,17594332	Gene ID= ENSG00000154640.14 TPM= 3.89 Transcript Type= NA
chr21	17593653	17612947	17593653	17612947	-	ENST00000348354.6@BTG3	ENST00000348354.6	protein_coding	17612699,17608972,17604860,17598617,17593653	17612947,17609152,17604997,17598824,17594332	Gene ID= ENSG00000154640.14 TPM= 72.78 Transcript Type= protein_coding
chr21	17593653	17612844	17593653	17612844	-	ENST00000339775.10@BTG3	ENST00000339775.10	protein_coding	17612699,17608972,17604860,17604145,17598617,17593653	17612844,17609152,17604997,17604276,17598824,17594332	Gene ID= ENSG00000154640.14 TPM= 8.56 Transcript Type= protein_coding
chr21	17611715	17614078	17611715	17614078	+	transcript369.chr21.nnic@NA	transcript369.chr21.nnic	NA	17611715	17614078	Gene ID= novel_gene_chr21_370 TPM= 2.34 Transcript Type= NA
chr21	17788967	17819386	17788967	17819386	-	ENST00000284881.8@C21orf91	ENST00000284881.8	protein_coding	17819303,17818192,17796582,17795208,17788967	17819386,17818325,17797118,17795270,17793581	Gene ID= ENSG00000154642.10 TPM= 18.68 Transcript Type= protein_coding
chr21	17792804	17819386	17792804	17819386	-	ENST00000400559.7@C21orf91	ENST00000400559.7	protein_coding	17819303,17818192,17796582,17795208,17792804	17819386,17818325,17797118,17795270,17793578	Gene ID= ENSG00000154642.10 TPM= 2.34 Transcript Type= protein_coding
chr21	21280576	21540195	21280576	21540195	+	ENST00000284894.8@NCAM2	ENST00000284894.8	protein_coding	21280576,21284194,21286269,21292104,21324383,21335505,21338389,21373863,21410274,21418473,21432108,21466606,21468662,21477291,21508851,21534537,21537846	21280652,21284400,21286412,21292241,21324500,21335665,21338534,21374013,21410461,21418569,21432281,21466725,21468783,21477471,21509055,21534656,21540195	Gene ID= ENSG00000154654.14 TPM= 6.42 Transcript Type= protein_coding
chr21	20998315	21543329	20998315	21543329	+	ENST00000400546.5@NCAM2	ENST00000400546.5	protein_coding	20998315,21280578,21284194,21286269,21292104,21324383,21335505,21338389,21373863,21410274,21418473,21432108,21466606,21468662,21477291,21508851,21534537,21537846	20998618,21280652,21284400,21286412,21292241,21324500,21335665,21338534,21374013,21410461,21418569,21432281,21466725,21468783,21477471,21509055,21534656,21543329	Gene ID= ENSG00000154654.14 TPM= 4.09 Transcript Type= protein_coding
chr21	25585656	25607517	25585656	25607517	-	ENST00000352957.8@MRPL39	ENST00000352957.8	protein_coding	25607403,25606449,25603796,25601368,25599799,25597302,25593893,25592812,25588835,25585656	25607517,25606655,25603935,25601467,25599866,25597414,25593958,25592965,25588882,25585754	Gene ID= ENSG00000154719.13 TPM= 40.87 Transcript Type= protein_coding
chr21	25639272	25717562	25639272	25717562	+	ENST00000480456.5@JAM2	ENST00000480456.5	protein_coding	25639272,25683883,25689866,25693756,25698677,25702170,25705979,25709434,25712340,25714640	25639888,25683948,25689973,25693908,25698879,25702269,25706086,25709449,25712382,25717562	Gene ID= ENSG00000154721.14 TPM= 11.68 Transcript Type= protein_coding
chr21	25639272	25714573	25639272	25714573	+	ENST00000400532.5@JAM2	ENST00000400532.5	protein_coding	25639272,25683883,25689866,25693756,25698677,25702170,25705979,25709434,25712340,25714231	25639888,25683948,25689973,25693908,25698879,25702269,25706086,25709449,25712382,25714573	Gene ID= ENSG00000154721.14 TPM= 1.17 Transcript Type= protein_coding
chr21	25724480	25734904	25724480	25734904	-	ENST00000400094.5@ATP5J	ENST00000400094.5	protein_coding	25734853,25734333,25729631,25725226,25724480	25734904,25734375,25729801,25725350,25724677	Gene ID= ENSG00000154723.12 TPM= 1.17 Transcript Type= protein_coding
chr21	25724480	25735033	25724480	25735033	-	ENST00000457143.6@ATP5J	ENST00000457143.6	protein_coding	25734939,25729631,25725226,25724480	25735033,25729801,25725350,25724677	Gene ID= ENSG00000154723.12 TPM= 1.17 Transcript Type= protein_coding
chr21	25724480	25735639	25724480	25735639	-	ENST00000400090.7@ATP5J	ENST00000400090.7	protein_coding	25735487,25729631,25725226,25724480	25735639,25729801,25725350,25724677	Gene ID= ENSG00000154723.12 TPM= 3.5 Transcript Type= protein_coding
chr21	25724480	25734972	25724480	25734972	-	ENST00000284971.7@ATP5J	ENST00000284971.7	protein_coding	25734853,25729631,25725226,25724480	25734972,25729801,25725350,25724677	Gene ID= ENSG00000154723.12 TPM= 42.03 Transcript Type= protein_coding
chr21	25724480	25735646	25724480	25735646	-	ENST00000400087.7@ATP5J	ENST00000400087.7	protein_coding	25735315,25729631,25725226,25724480	25735646,25729801,25725350,25724677	Gene ID= ENSG00000154723.12 TPM= 1.17 Transcript Type= protein_coding
chr21	25724480	25735673	25724480	25735673	-	ENST00000400093.3@ATP5J	ENST00000400093.3	protein_coding	25734989,25729631,25725226,25724480	25735673,25729801,25725350,25724677	Gene ID= ENSG00000154723.12 TPM= 2.34 Transcript Type= protein_coding
chr21	25734570	25772460	25734570	25772460	+	ENST00000354828.7@GABPA	ENST00000354828.7	protein_coding	25734570,25741573,25745210,25749036,25751989,25758010,25762312,25764210,25764595,25769004	25735070,25741675,25745354,25749120,25752234,25758204,25762365,25764350,25764787,25772460	Gene ID= ENSG00000154727.10 TPM= 18.68 Transcript Type= protein_coding
chr21	25735384	25772460	25735384	25772460	+	ENST00000400075.3@GABPA	ENST00000400075.3	protein_coding	25735384,25741573,25745210,25749036,25751989,25758010,25762312,25764210,25764595,25769004	25735578,25741675,25745354,25749120,25752234,25758204,25762365,25764350,25764787,25772460	Gene ID= ENSG00000154727.10 TPM= 44.37 Transcript Type= protein_coding
chr21	25945524	26170819	25945524	26170819	-	transcript437.chr21.nic@APP	transcript437.chr21.nic	protein_coding	26170564,26111979,26089943,26053236,26051000,26021840,26000015,25997360,25982344,25975954,25975070,25955627,25954590,25945524	26170819,26112146,26090072,26053348,26051193,26022042,26000182,25997416,25982477,25976028,25975228,25955755,25954689,25945975	Gene ID= ENSG00000142192.20 TPM= 7.2 Transcript Type= NA
chr21	25952379	26170819	25952379	26170819	-	transcript440.chr21.nic@APP	transcript440.chr21.nic	protein_coding	26170564,26111979,26089943,26053236,26051000,26021840,26000015,25997360,25982344,25975954,25975070,25955627,25952379	26170819,26112146,26090072,26053348,26051193,26022042,26000182,25997416,25982477,25976028,25975228,25955755,25954689	Gene ID= ENSG00000142192.20 TPM= 6.04 Transcript Type= NA
chr21	26021047	26170768	26021047	26170768	-	transcript446.chr21.nic@APP	transcript446.chr21.nic	protein_coding	26170564,26111979,26089943,26053236,26051000,26021047	26170768,26112146,26090072,26053348,26051193,26022042	Gene ID= ENSG00000142192.20 TPM= 3.5 Transcript Type= NA
chr21	25880550	26170654	25880550	26170654	-	ENST00000346798.7@APP	ENST00000346798.7	protein_coding	26170564,26111979,26089943,26053236,26051000,26021840,26000015,25997360,25982344,25975954,25975070,25955627,25954590,25911741,25905024,25897573,25891722,25880550	26170654,26112146,26090072,26053348,26051193,26022042,26000182,25997416,25982477,25976028,25975228,25955755,25954689,25911962,25905077,25897673,25891868,25881771	Gene ID= ENSG00000142192.20 TPM= 26.47 Transcript Type= protein_coding
chr21	26466209	26573284	26466209	26573284	-	ENST00000299340.8@CYYR1	ENST00000299340.8	protein_coding	26572868,26566266,26480272,26466209	26573284,26566368,26480429,26468631	Gene ID= ENSG00000166265.11 TPM= 280.22 Transcript Type= protein_coding
chr21	26835747	26845409	26835747	26845409	-	ENST00000284984.7@ADAMTS1	ENST00000284984.7	protein_coding	26844225,26842339,26841858,26840998,26840276,26839875,26839587,26838439,26835747	26845409,26842685,26841990,26841165,26840562,26840061,26839762,26838614,26838278	Gene ID= ENSG00000154734.14 TPM= 34.64 Transcript Type= protein_coding
chr21	28872191	28885371	28872191	28885371	-	ENST00000303775.9@N6AMT1	ENST00000303775.9	protein_coding	28885212,28882985,28882160,28879870,28878192,28872191	28885371,28883071,28882250,28879953,28878333,28876491	Gene ID= ENSG00000156239.11 TPM= 3.5 Transcript Type= protein_coding
chr21	28872191	28885371	28872191	28885371	-	ENST00000351429.7@N6AMT1	ENST00000351429.7	protein_coding	28885212,28882985,28882160,28878192,28872191	28885371,28883071,28882250,28878333,28876491	Gene ID= ENSG00000156239.11 TPM= 1.17 Transcript Type= protein_coding
chr21	29005759	29019350	29005759	29019350	-	ENST00000486719.5@RWDD2B	ENST00000486719.5	protein_coding	29019211,29009595,29008395,29008240,29007761,29005759	29019350,29009692,29008621,29008307,29008123,29006651	Gene ID= ENSG00000156253.6 TPM= 1.17 Transcript Type= processed_transcript
chr21	29004384	29019378	29004384	29019378	-	ENST00000493196.1@RWDD2B	ENST00000493196.1	protein_coding	29019211,29008395,29008240,29007761,29004384	29019378,29008621,29008307,29008123,29006651	Gene ID= ENSG00000156253.6 TPM= 8.17 Transcript Type= protein_coding
chr21	29005759	29019352	29005759	29019352	-	ENST00000286777.6@RWDD2B	ENST00000286777.6	protein_coding	29019211,29008395,29007761,29005759	29019352,29008621,29008123,29006651	Gene ID= ENSG00000156253.6 TPM= 1.17 Transcript Type= processed_transcript
chr21	29005759	29019359	29005759	29019359	-	ENST00000472184.1@RWDD2B	ENST00000472184.1	protein_coding	29019211,29008240,29007761,29005759	29019359,29008621,29008123,29006651	Gene ID= ENSG00000156253.6 TPM= 3.5 Transcript Type= retained_intron
chr21	29017910	29019363	29017910	29019363	+	transcript502.chr21.nnic@NA	transcript502.chr21.nnic	NA	29017910	29019363	Gene ID= novel_gene_chr21_503 TPM= 3.5 Transcript Type= NA
chr21	29024255	29024890	29024255	29024890	-	ENST00000608809.1@AF129075.2	ENST00000608809.1	antisense_RNA	29024255	29024890	Gene ID= ENSG00000273254.1 TPM= 1.17 Transcript Type= antisense_RNA
chr21	29024629	29054488	29024629	29054488	+	ENST00000399976.6@USP16	ENST00000399976.6	protein_coding	29024629,29027873,29030595,29034837,29036271,29037276,29038335,29039026,29039481,29040609,29042013,29042472,29043423,29046667,29048761,29050092,29053802,29054066	29024777,29027974,29030773,29034940,29036374,29037463,29038430,29039156,29039568,29040687,29042104,29042528,29043599,29047321,29048855,29050178,29053958,29054488	Gene ID= ENSG00000156256.14 TPM= 27.24 Transcript Type= protein_coding
chr21	29024629	29054488	29024629	29054488	+	ENST00000399975.7@USP16	ENST00000399975.7	protein_coding	29024629,29027873,29030595,29034837,29036271,29037279,29038335,29039026,29039481,29040609,29042013,29042472,29043423,29046667,29048761,29050092,29053802,29054066	29024777,29027974,29030773,29034940,29036374,29037463,29038430,29039156,29039568,29040687,29042104,29042528,29043599,29047321,29048855,29050178,29053958,29054488	Gene ID= ENSG00000156256.14 TPM= 14.4 Transcript Type= protein_coding
chr21	29024651	29054488	29024651	29054488	+	ENST00000474835.5@USP16	ENST00000474835.5	protein_coding	29024651,29027873,29030595,29034837,29036271,29037276,29038335,29039026,29039481,29040609,29042013,29042472,29046667,29048761,29050092,29053802,29054066	29024777,29027974,29030773,29034940,29036374,29037463,29038430,29039156,29039568,29040687,29042104,29043599,29047321,29048855,29050178,29053958,29054488	Gene ID= ENSG00000156256.14 TPM= 2.72 Transcript Type= retained_intron
chr21	29056324	29073797	29056324	29073797	-	ENST00000286788.8@CCT8	ENST00000286788.8	protein_coding	29073531,29070247,29069423,29067556,29066891,29066716,29064968,29063352,29062490,29062328,29062128,29061496,29061253,29060541,29056324	29073797,29070337,29069502,29067705,29067071,29066777,29065105,29063530,29062556,29062415,29062243,29061567,29061417,29060660,29056552	Gene ID= ENSG00000156261.12 TPM= 200.83 Transcript Type= protein_coding
chr21	29298846	29346148	29298846	29346148	+	transcript525.chr21.nnic@BACH1	transcript525.chr21.nnic	protein_coding	29298846,29305204,29321221,29326059,29329487,29342399	29298953,29305322,29321514,29327393,29329693,29346148	Gene ID= ENSG00000156273.15 TPM= 7.39 Transcript Type= NA
chr21	29300011	29346148	29300011	29346148	+	transcript539.chr21.nic@BACH1	transcript539.chr21.nic	protein_coding	29300011,29321221,29326059,29329487,29342399	29300175,29321514,29327393,29329693,29346148	Gene ID= ENSG00000156273.15 TPM= 6.22 Transcript Type= NA
chr21	29298897	29324252	29298897	29324252	+	transcript543.chr21.nic@BACH1	transcript543.chr21.nic	protein_coding	29298897,29321221	29298953,29324252	Gene ID= ENSG00000156273.15 TPM= 3.5 Transcript Type= NA
chr21	29298871	29346148	29298871	29346148	+	ENST00000286800.7@BACH1	ENST00000286800.7	protein_coding	29298871,29321221,29326059,29329487,29342399	29298953,29321514,29327393,29329693,29346148	Gene ID= ENSG00000156273.15 TPM= 26.07 Transcript Type= protein_coding
chr21	31118458	31160909	31118458	31160909	-	ENST00000636887.1@TIAM1	ENST00000636887.1	protein_coding	31160445,31154247,31153066,31152636,31146895,31141325,31141118,31135933,31130890,31130213,31127065,31124522,31118458	31160909,31154426,31153134,31152761,31147003,31141504,31141236,31136041,31130948,31130315,31127152,31124694,31120837	Gene ID= ENSG00000156299.13 TPM= 12.84 Transcript Type= protein_coding
chr21	31659622	31668931	31659622	31668931	+	ENST00000270142.10@SOD1	ENST00000270142.10	protein_coding	31659622,31663790,31666449,31667258,31668471	31659841,31663886,31666518,31667375,31668931	Gene ID= ENSG00000142168.14 TPM= 189.73 Transcript Type= protein_coding
chr21	31659709	31668931	31659709	31668931	+	ENST00000470944.1@SOD1	ENST00000470944.1	protein_coding	31659709,31663790,31666449,31667258,31668471	31660708,31663886,31666518,31667375,31668931	Gene ID= ENSG00000142168.14 TPM= 1.75 Transcript Type= processed_transcript
chr21	31671033	31732101	31671033	31732101	-	transcript550.chr21.nnic@SCAF4	transcript550.chr21.nnic	protein_coding	31731663,31706274,31705423,31703765,31702244,31701776,31696569,31696113,31694813,31694204,31693294,31692349,31691817,31690797,31688307,31685568,31685398,31685049,31671033	31732101,31706357,31705467,31703926,31702379,31701918,31696750,31696221,31694980,31694289,31693484,31692449,31691930,31690953,31688464,31685733,31685484,31685174,31672354	Gene ID= ENSG00000156304.14 TPM= 2.72 Transcript Type= NA
chr21	31671033	31732075	31671033	31732075	-	ENST00000286835.11@SCAF4	ENST00000286835.11	protein_coding	31731663,31706274,31705423,31703765,31702244,31701776,31700995,31696569,31696113,31694813,31694204,31693294,31692349,31691817,31690797,31688307,31685568,31685398,31685049,31671033	31732075,31706357,31705467,31703926,31702379,31701918,31701171,31696750,31696221,31694980,31694289,31693484,31692449,31691930,31690953,31688464,31685733,31685484,31685240,31672354	Gene ID= ENSG00000156304.14 TPM= 13.23 Transcript Type= protein_coding
chr21	31671033	31732075	31671033	31732075	-	ENST00000399804.5@SCAF4	ENST00000399804.5	protein_coding	31731663,31706274,31705423,31703765,31702244,31701776,31700995,31696569,31696113,31694813,31694204,31693294,31692349,31691817,31690797,31688307,31685568,31685398,31685049,31671033	31732075,31706357,31705467,31703926,31702379,31701918,31701171,31696750,31696221,31694980,31694289,31693484,31692449,31691930,31690953,31688464,31685733,31685484,31685174,31672354	Gene ID= ENSG00000156304.14 TPM= 9.73 Transcript Type= protein_coding
chr21	31873315	32004064	31873315	32004064	+	ENST00000270112.6@HUNK	ENST00000270112.6	protein_coding	31873315,31924468,31940165,31946036,31958843,31968250,31974555,31983526,31990129,31995768,31998526	31873935,31924760,31940220,31946171,31958970,31968385,31974717,31983609,31990176,31995948,32004064	Gene ID= ENSG00000142149.8 TPM= 1.17 Transcript Type= protein_coding
chr21	32268219	32279069	32268219	32279069	-	ENST00000290130.3@MIS18A	ENST00000290130.3	protein_coding	32278681,32274830,32270407,32269707,32268219	32279069,32274896,32270529,32269803,32269117	Gene ID= ENSG00000159055.3 TPM= 3.5 Transcript Type= protein_coding
chr21	32298850	32312290	32298850	32312290	+	ENST00000303645.9@MRAP	ENST00000303645.9	protein_coding	32298850,32306640,32311684	32299077,32306739,32312290	Gene ID= ENSG00000170262.12 TPM= 1.17 Transcript Type= protein_coding
chr21	32393130	32393960	32393130	32393960	+	ENST00000534991.3@URB1-AS1	ENST00000534991.3	lincRNA	32393130	32393960	Gene ID= ENSG00000256073.3 TPM= 5.84 Transcript Type= lincRNA
chr21	32412420	32515389	32412420	32515389	+	transcript570.chr21.nic@EVA1C	transcript570.chr21.nic	protein_coding	32412420,32453312,32457597,32467696,32495027,32501415,32503926,32514814	32413013,32453508,32457720,32467848,32495170,32501538,32504015,32515389	Gene ID= ENSG00000166979.12 TPM= 4.67 Transcript Type= NA
chr21	32412505	32515389	32412505	32515389	+	transcript573.chr21.nic@EVA1C	transcript573.chr21.nic	protein_coding	32412505,32453312,32467696,32495027,32501415,32503926,32514814	32413013,32453508,32467848,32495170,32501495,32504015,32515389	Gene ID= ENSG00000166979.12 TPM= 4.09 Transcript Type= NA
chr21	32412437	32515389	32412437	32515389	+	ENST00000437338.5@EVA1C	ENST00000437338.5	protein_coding	32412437,32457597,32467696,32495027,32501415,32503926,32514814	32413013,32457720,32467848,32495170,32501495,32504015,32515389	Gene ID= ENSG00000166979.12 TPM= 5.25 Transcript Type= nonsense_mediated_decay
chr21	32412368	32515389	32412368	32515389	+	transcript581.chr21.nic@EVA1C	transcript581.chr21.nic	protein_coding	32412368,32467696,32495027,32501415,32503926,32514814	32413013,32467848,32495170,32501495,32504015,32515389	Gene ID= ENSG00000166979.12 TPM= 32.11 Transcript Type= NA
chr21	32412305	32495684	32412305	32495684	+	transcript583.chr21.nic@EVA1C	transcript583.chr21.nic	protein_coding	32412305,32453312,32457597,32467696,32495027	32413013,32453508,32457720,32467848,32495684	Gene ID= ENSG00000166979.12 TPM= 4.67 Transcript Type= NA
chr21	32412702	32515389	32412702	32515389	+	ENST00000382699.7@EVA1C	ENST00000382699.7	protein_coding	32412702,32453312,32457597,32467696,32495027,32501415,32503926,32514814	32413013,32453508,32457720,32467848,32495170,32501486,32504015,32515389	Gene ID= ENSG00000166979.12 TPM= 9.34 Transcript Type= protein_coding
chr21	32601667	32612587	32601667	32612587	-	transcript593.chr21.nic@C21orf59	transcript593.chr21.nic	protein_coding	32612105,32609838,32607649,32604125,32603161,32602272,32601667	32612587,32609954,32607716,32604283,32603292,32602367,32601973	Gene ID= ENSG00000159079.18 TPM= 2.92 Transcript Type= NA
chr21	32601667	32612866	32601667	32612866	-	ENST00000290155.7@C21orf59	ENST00000290155.7	protein_coding	32612105,32609838,32607649,32604125,32603161,32602272,32601667	32612866,32610005,32607716,32604283,32603292,32602367,32601973	Gene ID= ENSG00000159079.18 TPM= 42.62 Transcript Type= protein_coding
chr21	32601667	32612352	32601667	32612352	-	ENST00000440966.5@C21orf59	ENST00000440966.5	protein_coding	32612105,32609838,32607649,32604125,32603161,32601667	32612352,32610005,32607716,32604283,32603292,32601973	Gene ID= ENSG00000159079.18 TPM= 2.34 Transcript Type= protein_coding
chr21	32601667	32612586	32601667	32612586	-	ENST00000382549.8@C21orf59	ENST00000382549.8	protein_coding	32612105,32609838,32607649,32604125,32601667	32612586,32610005,32607716,32604283,32603292	Gene ID= ENSG00000159079.18 TPM= 7.01 Transcript Type= protein_coding
chr21	32628759	32728040	32628759	32728040	-	ENST00000382491.7@SYNJ1	ENST00000382491.7	protein_coding	32727946,32726772,32701961,32699838,32695057,32694228,32688306,32686978,32685748,32684038,32681496,32678645,32673340,32670288,32666433,32665943,32664913,32657716,32657003,32656687,32653288,32650184,32646393,32645646,32641896,32639671,32638908,32634861,32628759	32728040,32726917,32702047,32700105,32695282,32694311,32688367,32687074,32685917,32684119,32681648,32678810,32673531,32670372,32666573,32666135,32665071,32657872,32657120,32656902,32653366,32650346,32646602,32645789,32641966,32639779,32639125,32634884,32631801	Gene ID= ENSG00000159082.17 TPM= 4.67 Transcript Type= protein_coding
chr21	32628764	32727900	32628764	32727900	-	ENST00000630077.2@SYNJ1	ENST00000630077.2	protein_coding	32727837,32726772,32701961,32699838,32695057,32694228,32688306,32686978,32685748,32684038,32681496,32678645,32673340,32670288,32666433,32665943,32664913,32657716,32657003,32656687,32653288,32650184,32646393,32645646,32641896,32639671,32638908,32628764	32727900,32726917,32702047,32700105,32695282,32694311,32688367,32687074,32685917,32684119,32681648,32678810,32673531,32670372,32666573,32666135,32665071,32657872,32657120,32656902,32653366,32650346,32646602,32645789,32641966,32639779,32639125,32631801	Gene ID= ENSG00000159082.17 TPM= 10.51 Transcript Type= protein_coding
chr21	32733899	32771755	32733899	32771755	-	transcript609.chr21.nic@PAXBP1	transcript609.chr21.nic	protein_coding	32771326,32769814,32764348,32762096,32761059,32759080,32755213,32751119,32750917,32748499,32745574,32744792,32743678,32743248,32738173,32737254,32733899	32771755,32769942,32764524,32762317,32761162,32759994,32755353,32751218,32751032,32748698,32745718,32744913,32743754,32743314,32738319,32737408,32735067	Gene ID= ENSG00000159086.14 TPM= 3.5 Transcript Type= NA
chr21	32754847	32771798	32754847	32771798	-	transcript616.chr21.nic@PAXBP1	transcript616.chr21.nic	protein_coding	32771326,32769814,32764348,32762096,32761059,32759777,32759080,32754847	32771798,32769942,32764524,32762317,32761162,32759994,32759269,32755353	Gene ID= ENSG00000159086.14 TPM= 3.5 Transcript Type= NA
chr21	33070144	33072420	33070144	33072420	+	ENST00000382348.1@OLIG1	ENST00000382348.1	protein_coding	33070144	33072420	Gene ID= ENSG00000184221.12 TPM= 8.17 Transcript Type= protein_coding
chr21	33229901	33262756	33229901	33262756	+	ENST00000382264.7@IFNAR2	ENST00000382264.7	protein_coding	33229901,33241886,33243673,33244951,33246718,33248709,33252662,33260597,33262561	33230216,33241977,33243714,33245074,33246890,33248854,33252830,33260727,33262756	Gene ID= ENSG00000159110.19 TPM= 4.67 Transcript Type= protein_coding
chr21	33229901	33264525	33229901	33264525	+	transcript637.chr21.nic@IFNAR2	transcript637.chr21.nic	protein_coding	33229901,33241886,33243673,33244951,33246718,33248709,33252662,33260597,33262793	33230216,33241977,33243714,33245074,33246890,33248854,33252830,33260727,33264525	Gene ID= ENSG00000159110.19 TPM= 4.67 Transcript Type= NA
chr21	33229974	33264525	33229974	33264525	+	ENST00000342136.8@IFNAR2	ENST00000342136.8	protein_coding	33229974,33241840,33243673,33244951,33246718,33248709,33252662,33260597,33262793	33230216,33241977,33243714,33245074,33246890,33248854,33252830,33260727,33264525	Gene ID= ENSG00000159110.19 TPM= 3.5 Transcript Type= protein_coding
chr21	33263873	33266260	33263873	33266260	-	ENST00000411998.1@IL10RB-AS1	ENST00000411998.1	antisense_RNA	33266063,33263873	33266260,33265902	Gene ID= ENSG00000223799.1 TPM= 1.17 Transcript Type= antisense_RNA
chr21	33266358	33297234	33266358	33297234	+	ENST00000290200.6@IL10RB	ENST00000290200.6	protein_coding	33266358,33268394,33276596,33279752,33283094,33288104,33296184	33266514,33268517,33276753,33279918,33283241,33288261,33297234	Gene ID= ENSG00000243646.9 TPM= 119.09 Transcript Type= protein_coding
chr21	33324960	33359815	33324960	33359815	+	transcript646.chr21.nnic@IFNAR1	transcript646.chr21.nnic	protein_coding	33324960,33335524,33340999,33343268,33343535,33345246,33349091,33349389,33352758,33353638,33355316,33357806	33325131,33335647,33341174,33343422,33343676,33345360,33349290,33349543,33352908,33353783,33355596,33359815	Gene ID= ENSG00000142166.12 TPM= 3.89 Transcript Type= NA
chr21	33324960	33359604	33324960	33359604	+	transcript649.chr21.nnic@IFNAR1	transcript649.chr21.nnic	protein_coding	33324960,33335524,33340999,33343268,33343535,33345246,33349091,33349389,33352758,33353638,33355316,33357813	33325131,33335647,33341174,33343422,33343676,33345360,33349290,33349543,33352908,33353783,33355735,33359604	Gene ID= ENSG00000142166.12 TPM= 3.89 Transcript Type= NA
chr21	33324904	33359862	33324904	33359862	+	ENST00000270139.7@IFNAR1	ENST00000270139.7	protein_coding	33324904,33335524,33340999,33343268,33343535,33345246,33349091,33349389,33352758,33353638,33355316	33325131,33335647,33341174,33343422,33343676,33345360,33349290,33349543,33352908,33353783,33359862	Gene ID= ENSG00000142166.12 TPM= 49.42 Transcript Type= protein_coding
chr21	33360398	33360788	33360398	33360788	-	transcript660.chr21.nnic@NA	transcript660.chr21.nnic	NA	33360398	33360788	Gene ID= novel_gene_chr21_661 TPM= 2.34 Transcript Type= NA
chr21	33403432	33437521	33403432	33437521	+	ENST00000381995.5@IFNGR2	ENST00000381995.5	protein_coding	33403432,33410836,33414888,33421480,33426884,33432177,33432714,33436828	33403616,33410892,33415020,33421685,33427032,33432336,33432871,33437521	Gene ID= ENSG00000159128.14 TPM= 13.43 Transcript Type= protein_coding
chr21	33402896	33437521	33402896	33437521	+	ENST00000290219.10@IFNGR2	ENST00000290219.10	protein_coding	33402896,33414888,33421480,33426884,33432177,33432714,33436828	33403616,33415020,33421685,33427032,33432336,33432871,33437521	Gene ID= ENSG00000159128.14 TPM= 255.7 Transcript Type= protein_coding
chr21	33432485	33480005	33432485	33480005	-	transcript666.chr21.nic@TMEM50B	transcript666.chr21.nic	protein_coding	33479838,33468787,33467010,33465342,33460413,33455727,33448782,33447018,33439214,33436883,33432485	33480005,33468926,33467122,33465409,33460505,33455784,33450863,33447140,33439297,33436992,33432802	Gene ID= ENSG00000142188.16 TPM= 8.17 Transcript Type= NA
chr21	33432485	33480005	33432485	33480005	-	transcript669.chr21.nic@TMEM50B	transcript669.chr21.nic	protein_coding	33479838,33468787,33467010,33465342,33460413,33455727,33448782,33439214,33436883,33432485	33480005,33468926,33467122,33465409,33460505,33455784,33450863,33439297,33436992,33432802	Gene ID= ENSG00000142188.16 TPM= 16.35 Transcript Type= NA
chr21	33449135	33480011	33449135	33480011	-	ENST00000542230.6@TMEM50B	ENST00000542230.6	protein_coding	33479838,33468787,33467010,33465342,33460413,33455727,33449135	33480011,33468926,33467122,33465409,33460505,33455784,33450863	Gene ID= ENSG00000142188.16 TPM= 167.55 Transcript Type= protein_coding
chr21	33432485	33479943	33432485	33479943	-	ENST00000420455.5@TMEM50B	ENST00000420455.5	protein_coding	33479838,33468787,33467010,33465342,33460413,33455727,33448782,33439214,33432485	33479943,33468926,33467122,33465409,33460505,33455784,33450863,33439297,33432802	Gene ID= ENSG00000142188.16 TPM= 14.01 Transcript Type= nonsense_mediated_decay
chr21	33498520	33542143	33498520	33542143	-	transcript705.chr21.nnic@GART	transcript705.chr21.nnic	protein_coding	33542065,33539171,33535225,33534579,33532345,33531489,33530759,33528850,33528519,33528167,33524769,33522188,33520906,33520364,33517357,33516989,33511252,33509783,33505974,33505561,33504412,33504153,33498520	33542143,33539356,33535320,33534753,33532456,33531557,33530884,33528937,33528604,33528335,33525000,33522282,33521015,33520562,33517608,33517141,33511458,33509920,33506104,33505702,33504527,33504315,33499097	Gene ID= ENSG00000159131.16 TPM= 2.34 Transcript Type= NA
chr21	33503933	33542831	33503933	33542831	-	transcript710.chr21.nnic@GART	transcript710.chr21.nnic	protein_coding	33542548,33539171,33535225,33534579,33532345,33531489,33530759,33528850,33528519,33528167,33524769,33522188,33520906,33520364,33517357,33516989,33511252,33509783,33505974,33505561,33504412,33503933	33542831,33539356,33535320,33534753,33532456,33531557,33530884,33528937,33528604,33528335,33525000,33522282,33521015,33520562,33517608,33517141,33511458,33509920,33506104,33505702,33504527,33504315	Gene ID= ENSG00000159131.16 TPM= 2.92 Transcript Type= NA
chr21	33503933	33542143	33503933	33542143	-	transcript711.chr21.nnic@GART	transcript711.chr21.nnic	protein_coding	33542065,33539171,33535225,33534579,33532345,33531489,33530759,33528850,33528519,33528167,33524769,33522188,33520906,33520364,33517357,33516989,33511252,33505974,33505561,33504412,33503933	33542143,33539356,33535320,33534753,33532456,33531557,33530884,33528937,33528604,33528335,33525000,33522282,33521015,33520562,33517608,33517141,33511458,33506104,33505702,33504527,33504315	Gene ID= ENSG00000159131.16 TPM= 3.5 Transcript Type= NA
chr21	33524009	33542831	33524009	33542831	-	transcript714.chr21.nic@GART	transcript714.chr21.nic	protein_coding	33542660,33539171,33535225,33534579,33532345,33531489,33530759,33528850,33528519,33528167,33524009	33542831,33539356,33535320,33534753,33532456,33531557,33530884,33528937,33528604,33528335,33525000	Gene ID= ENSG00000159131.16 TPM= 2.34 Transcript Type= NA
chr21	33531570	33542143	33531570	33542143	-	transcript718.chr21.nic@GART	transcript718.chr21.nic	protein_coding	33542065,33539171,33535225,33534579,33531570	33542143,33539356,33535320,33534753,33532456	Gene ID= ENSG00000159131.16 TPM= 5.84 Transcript Type= NA
chr21	33503931	33542138	33503931	33542138	-	ENST00000381815.8@GART	ENST00000381815.8	protein_coding	33542065,33539171,33535225,33534579,33532345,33531489,33530759,33528850,33528519,33528167,33524769,33522188,33520906,33520364,33517357,33516989,33511252,33509783,33505974,33505561,33504412,33503931	33542138,33539356,33535320,33534753,33532456,33531557,33530884,33528937,33528604,33528335,33525000,33522282,33521015,33520562,33517608,33517141,33511458,33509920,33506104,33505702,33504527,33504315	Gene ID= ENSG00000159131.16 TPM= 32.11 Transcript Type= protein_coding
chr21	33524009	33542114	33524009	33542114	-	ENST00000361093.9@GART	ENST00000361093.9	protein_coding	33542065,33539171,33535225,33534579,33532345,33531489,33530759,33528850,33528519,33528167,33524009	33542114,33539356,33535320,33534753,33532456,33531557,33530884,33528937,33528604,33528335,33525000	Gene ID= ENSG00000159131.16 TPM= 22.18 Transcript Type= protein_coding
chr21	33542618	33577481	33542618	33577481	+	ENST00000356577.8@SON	ENST00000356577.8	protein_coding	33542618,33546213,33549476,33557156,33559230,33559587,33567157,33568971,33573308,33575596,33575778,33576365	33543169,33546379,33555391,33557316,33559376,33559775,33567267,33569087,33573455,33575667,33575893,33577481	Gene ID= ENSG00000159140.19 TPM= 27.44 Transcript Type= protein_coding
chr21	33543039	33577481	33543039	33577481	+	transcript726.chr21.nic@SON	transcript726.chr21.nic	protein_coding	33543039,33546213,33549476,33557156,33559230,33559587,33567157,33568971,33573308,33575596,33575778,33576418	33543169,33546379,33555391,33557316,33559376,33559775,33567267,33569087,33573455,33575667,33575893,33577481	Gene ID= ENSG00000159140.19 TPM= 34.44 Transcript Type= NA
chr21	33543065	33559056	33543065	33559056	+	ENST00000381679.8@SON	ENST00000381679.8	protein_coding	33543065,33546213,33549476,33557156,33557546	33543169,33546379,33555391,33557316,33559056	Gene ID= ENSG00000159140.19 TPM= 26.85 Transcript Type= protein_coding
chr21	33577905	33588708	33577905	33588708	-	ENST00000303071.9@DONSON	ENST00000303071.9	protein_coding	33588321,33587522,33585978,33584590,33583488,33582165,33581951,33581302,33579350,33577905	33588708,33587602,33586181,33584768,33583666,33582246,33582055,33581500,33579562,33578444	Gene ID= ENSG00000159147.17 TPM= 1.17 Transcript Type= protein_coding
chr21	33577543	33588700	33577543	33588700	-	transcript733.chr21.nnic@DONSON	transcript733.chr21.nnic	protein_coding	33588321,33587522,33585978,33584590,33581951,33581302,33579350,33577653,33577543	33588700,33587602,33586181,33584768,33582055,33581500,33579562,33578444,33577602	Gene ID= ENSG00000159147.17 TPM= 2.34 Transcript Type= NA
chr21	33589341	33641760	33589341	33641760	-	ENST00000381554.7@CRYZL1	ENST00000381554.7	protein_coding	33641681,33631486,33624683,33621996,33616706,33613538,33603404,33602234,33599150,33597280,33595731,33591162,33589341	33641760,33631557,33624760,33622068,33616750,33613606,33603537,33602345,33599248,33597401,33595836,33591207,33589921	Gene ID= ENSG00000205758.11 TPM= 2.34 Transcript Type= protein_coding
chr21	33594643	33641754	33594643	33641754	-	transcript757.chr21.nic@CRYZL1	transcript757.chr21.nic	protein_coding	33641681,33631486,33624683,33621996,33616706,33613538,33603404,33602234,33599150,33597280,33595731,33594643	33641754,33631557,33624760,33622068,33616750,33613606,33603537,33602345,33599248,33597401,33595836,33595614	Gene ID= ENSG00000205758.11 TPM= 4.67 Transcript Type= NA
chr21	33589467	33641747	33589467	33641747	-	ENST00000381540.7@CRYZL1	ENST00000381540.7	protein_coding	33641681,33631486,33624683,33621996,33616706,33613538,33603404,33602234,33599150,33597280,33595731,33591162,33589467	33641747,33631557,33624760,33622068,33616750,33613606,33603537,33602345,33599248,33597401,33595836,33591211,33589921	Gene ID= ENSG00000205758.11 TPM= 7.01 Transcript Type= protein_coding
chr21	33616287	33641722	33616287	33641722	-	ENST00000413017.2@CRYZL1	ENST00000413017.2	protein_coding	33641681,33631486,33624683,33621996,33616706,33616287	33641722,33631557,33624760,33622068,33616750,33616603	Gene ID= ENSG00000205758.11 TPM= 1.17 Transcript Type= protein_coding
chr21	33642496	33838498	33642496	33838498	+	ENST00000399352.5@ITSN1	ENST00000399352.5	protein_coding	33642496,33718797,33721178,33722588,33735044,33750143,33751810,33755297,33761923,33765875,33767713,33772061,33774729,33774968,33781461,33781994,33794341,33797379,33799808,33810975,33813913,33818267,33819241,33823487,33826818,33829624,33834307,33836441,33836987	33642713,33718856,33721270,33722651,33735204,33750322,33751906,33755397,33761986,33766012,33767828,33772323,33774878,33775108,33781548,33782133,33794468,33797608,33799929,33811222,33814072,33818472,33819323,33823653,33826863,33829745,33834424,33836632,33838498	Gene ID= ENSG00000205726.14 TPM= 15.18 Transcript Type= protein_coding
chr21	33903453	33915980	33903453	33915980	-	ENST00000290299.6@ATP5O	ENST00000290299.6	protein_coding	33915728,33914450,33912289,33909082,33907341,33903935,33903453	33915980,33914500,33912399,33909211,33907453,33904021,33903639	Gene ID= ENSG00000241837.6 TPM= 102.75 Transcript Type= protein_coding
chr21	33903453	33915761	33903453	33915761	-	ENST00000431254.5@ATP5O	ENST00000431254.5	protein_coding	33915728,33914450,33912289,33907341,33903935,33903453	33915761,33914500,33912399,33907453,33904021,33903639	Gene ID= ENSG00000241837.6 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr21	33931163	33938372	33931163	33938372	+	ENST00000599421.1@LINC00649	ENST00000599421.1	antisense_RNA	33931163,33938225	33931742,33938372	Gene ID= ENSG00000237945.7 TPM= 1.17 Transcript Type= antisense_RNA
chr21	34073549	34143034	34073549	34143034	+	ENST00000477091.5@MRPS6	ENST00000477091.5	protein_coding	34073549,34102835,34103497,34125341,34142408	34073745,34102908,34103519,34125480,34143034	Gene ID= ENSG00000243927.5 TPM= 1.75 Transcript Type= processed_transcript
chr21	34073515	34106260	34073515	34106260	+	transcript786.chr21.nnic@MRPS6	transcript786.chr21.nnic	protein_coding	34073515,34094863,34102835,34103497	34073745,34097283,34102908,34106260	Gene ID= ENSG00000243927.5 TPM= 2.34 Transcript Type= NA
chr21	34073576	34142982	34073576	34142982	+	transcript787.chr21.nnic@MRPS6	transcript787.chr21.nnic	protein_coding	34073576,34094863,34125341,34142408	34073745,34097283,34125480,34142982	Gene ID= ENSG00000243927.5 TPM= 12.84 Transcript Type= NA
chr21	34073523	34143034	34073523	34143034	+	ENST00000399312.2@MRPS6	ENST00000399312.2	protein_coding	34073523,34125341,34142408	34073745,34125480,34143034	Gene ID= ENSG00000243927.5 TPM= 92.82 Transcript Type= protein_coding
chr21	34073222	34074278	34073222	34074278	+	transcript793.chr21.nnic@MRPS6	transcript793.chr21.nnic	protein_coding	34073222,34073612	34073268,34074278	Gene ID= ENSG00000243927.5 TPM= 5.84 Transcript Type= NA
chr21	34073539	34325743	34073539	34325743	+	transcript783.chr21.nnic@AP000317.2	transcript783.chr21.nnic	processed_transcript	34073539,34125341,34164915,34194566,34195503,34215500,34262820,34293681,34324736	34073745,34125480,34165036,34194792,34195562,34215540,34262921,34293756,34325743	Gene ID= ENSG00000272657.1 TPM= 2.34 Transcript Type= NA
chr21	34073570	34106262	34073570	34106262	+	ENST00000381151.4@SLC5A3	ENST00000381151.4	protein_coding	34073570,34094863	34073745,34106262	Gene ID= ENSG00000198743.6 TPM= 11.68 Transcript Type= protein_coding
chr21	34082057	34083369	34082057	34083369	-	transcript799.chr21.nnic@NA	transcript799.chr21.nnic	NA	34082057	34083369	Gene ID= novel_gene_chr21_800 TPM= 8.17 Transcript Type= NA
chr21	34375480	34402777	34375480	34402777	+	ENST00000481710.5@SMIM11A	ENST00000481710.5	protein_coding	34375480,34379428,34385478,34399711,34402091	34375567,34379516,34385644,34399899,34402777	Gene ID= ENSG00000205670.10 TPM= 1.17 Transcript Type= processed_transcript
chr21	34375500	34389154	34375500	34389154	+	ENST00000399292.7@SMIM11A	ENST00000399292.7	protein_coding	34375500,34379428,34385478,34388629	34375567,34379516,34385644,34389154	Gene ID= ENSG00000205670.10 TPM= 9.34 Transcript Type= protein_coding
chr21	34509456	34512207	34509456	34512207	-	ENST00000489175.1@KCNE1	ENST00000489175.1	protein_coding	34512027,34509456	34512207,34511315	Gene ID= ENSG00000180509.11 TPM= 1.17 Transcript Type= processed_transcript
chr21	34516484	34526963	34516484	34526963	-	ENST00000381132.6@RCAN1	ENST00000381132.6	protein_coding	34526663,34523537,34521499,34516484	34526963,34523710,34521658,34518256	Gene ID= ENSG00000159200.17 TPM= 10.51 Transcript Type= protein_coding
chr21	34516484	34615142	34516484	34615142	-	ENST00000313806.8@RCAN1	ENST00000313806.8	protein_coding	34614760,34523537,34521499,34516484	34615142,34523710,34521658,34518256	Gene ID= ENSG00000159200.17 TPM= 45.54 Transcript Type= protein_coding
chr21	34669389	34718227	34669389	34718227	+	ENST00000360731.7@CLIC6	ENST00000360731.7	protein_coding	34669389,34706027,34707280,34707944,34708700,34709357,34716321	34670762,34706080,34707389,34708069,34708806,34709538,34718227	Gene ID= ENSG00000159212.12 TPM= 4.67 Transcript Type= protein_coding
chr21	34836315	34842515	34836315	34842515	+	transcript816.chr21.nnic@NA	transcript816.chr21.nnic	NA	34836315,34840612	34836946,34842515	Gene ID= novel_gene_chr21_817 TPM= 10.51 Transcript Type= NA
chr21	34853817	34857236	34853817	34857236	-	transcript821.chr21.nnic@NA	transcript821.chr21.nnic	NA	34853817	34857236	Gene ID= novel_gene_chr21_822 TPM= 3.5 Transcript Type= NA
chr21	34861420	34863624	34861420	34863624	+	transcript819.chr21.nnic@NA	transcript819.chr21.nnic	NA	34861420	34863624	Gene ID= novel_gene_chr21_820 TPM= 2.34 Transcript Type= NA
chr21	36034541	36060553	36034541	36060553	-	transcript825.chr21.nnic@SETD4	transcript825.chr21.nnic	protein_coding	36060347,36058816,36057384,36057109,36053583,36045582,36043782,36041807,36040575,36038150,36036518,36036085,36034541	36060553,36058924,36057477,36057204,36053620,36046011,36043956,36041888,36040655,36038273,36036680,36036251,36035960	Gene ID= ENSG00000185917.13 TPM= 2.34 Transcript Type= NA
chr21	36034541	36060553	36034541	36060553	-	transcript828.chr21.nic@SETD4	transcript828.chr21.nic	protein_coding	36060347,36058816,36057384,36057109,36053583,36048308,36045582,36043782,36041807,36040575,36038150,36036085,36034541	36060553,36058924,36057477,36057204,36053620,36048396,36046011,36043956,36041888,36040655,36038273,36036251,36035960	Gene ID= ENSG00000185917.13 TPM= 2.34 Transcript Type= NA
chr21	36034541	36060550	36034541	36060550	-	transcript830.chr21.nic@SETD4	transcript830.chr21.nic	protein_coding	36060347,36058816,36057384,36057109,36053583,36048308,36045582,36043782,36041807,36040575,36038150,36036085,36034541	36060550,36058973,36057477,36057204,36053620,36048396,36046011,36043956,36041888,36040655,36038273,36036251,36035960	Gene ID= ENSG00000185917.13 TPM= 3.5 Transcript Type= NA
chr21	36034541	36060550	36034541	36060550	-	ENST00000332131.8@SETD4	ENST00000332131.8	protein_coding	36060347,36058816,36057109,36053583,36048308,36045582,36043782,36041807,36040575,36038150,36036085,36034541	36060550,36058924,36057204,36053620,36048396,36046011,36043956,36041888,36040655,36038273,36036251,36035960	Gene ID= ENSG00000185917.13 TPM= 1.17 Transcript Type= protein_coding
chr21	36043686	36060553	36043686	36060553	-	transcript847.chr21.nic@SETD4	transcript847.chr21.nic	protein_coding	36060347,36058816,36057109,36053583,36048308,36045582,36043686	36060553,36058924,36057204,36053620,36048396,36046011,36043956	Gene ID= ENSG00000185917.13 TPM= 11.68 Transcript Type= NA
chr21	36034541	36037796	36034541	36037796	-	transcript851.chr21.nic@SETD4	transcript851.chr21.nic	protein_coding	36036085,36034541	36037796,36035960	Gene ID= ENSG00000185917.13 TPM= 2.34 Transcript Type= NA
chr21	36069941	36073166	36069941	36073166	+	ENST00000290349.10@CBR1	ENST00000290349.10	protein_coding	36069941,36070950,36072446	36070404,36071057,36073166	Gene ID= ENSG00000159228.12 TPM= 206.66 Transcript Type= protein_coding
chr21	36134912	36146566	36134912	36146566	+	ENST00000290354.5@CBR3	ENST00000290354.5	protein_coding	36134912,36137825,36146076	36135481,36137932,36146566	Gene ID= ENSG00000159231.5 TPM= 2.34 Transcript Type= protein_coding
chr21	36319792	36320670	36319792	36320670	-	ENST00000608391.1@AP000692.2	ENST00000608391.1	antisense_RNA	36319792	36320670	Gene ID= ENSG00000273199.1 TPM= 1.17 Transcript Type= antisense_RNA
chr21	36320189	36376646	36320189	36376646	+	ENST00000400485.5@MORC3	ENST00000400485.5	protein_coding	36320189,36333646,36336874,36337732,36338774,36341399,36344579,36344912,36349311,36356620,36359955,36360184,36362183,36364093,36368988,36372374,36375143	36320303,36333718,36337006,36337946,36338921,36341546,36344707,36345031,36349408,36356724,36360077,36360258,36362228,36364259,36369876,36372531,36376646	Gene ID= ENSG00000159256.12 TPM= 23.94 Transcript Type= protein_coding
chr21	36320231	36376646	36320231	36376646	+	ENST00000487909.5@MORC3	ENST00000487909.5	protein_coding	36320231,36336874,36337732,36338774,36341399,36344579,36344912,36349311,36356620,36359955,36360184,36362183,36364093,36368988,36372374,36375143	36320303,36337006,36337946,36338921,36341546,36344707,36345031,36349408,36356724,36360077,36360258,36362228,36364259,36369876,36372531,36376646	Gene ID= ENSG00000159256.12 TPM= 1.75 Transcript Type= processed_transcript
chr21	37006563	37019659	37006563	37019659	+	ENST00000329553.2@RIPPLY3	ENST00000329553.2	protein_coding	37006563,37008157,37013551,37017874	37006876,37008223,37013618,37019659	Gene ID= ENSG00000183145.8 TPM= 2.34 Transcript Type= protein_coding
chr21	37062113	37073129	37062113	37073129	-	transcript877.chr21.nnic@PIGP	transcript877.chr21.nnic	protein_coding	37073000,37072434,37069552,37067262,37063538,37062113	37073129,37072537,37069624,37067380,37065712,37063501	Gene ID= ENSG00000185808.13 TPM= 2.34 Transcript Type= NA
chr21	37065374	37073170	37065374	37073170	-	ENST00000399098.5@PIGP	ENST00000399098.5	protein_coding	37073000,37072434,37072145,37069552,37067262,37065374	37073170,37072537,37072310,37069624,37067380,37065712	Gene ID= ENSG00000185808.13 TPM= 1.17 Transcript Type= protein_coding
chr21	37059170	37073158	37059170	37073158	-	ENST00000360525.8@PIGP	ENST00000360525.8	protein_coding	37073000,37072434,37069552,37067262,37059170	37073158,37072537,37069624,37067380,37065712	Gene ID= ENSG00000185808.13 TPM= 1.17 Transcript Type= protein_coding
chr21	37062846	37072811	37062846	37072811	-	ENST00000464265.5@PIGP	ENST00000464265.5	protein_coding	37072434,37069552,37067262,37062846	37072811,37069624,37067380,37065712	Gene ID= ENSG00000185808.13 TPM= 2.34 Transcript Type= protein_coding
chr21	37065374	37073011	37065374	37073011	-	ENST00000399103.5@PIGP	ENST00000399103.5	protein_coding	37072991,37072434,37069552,37067262,37065374	37073011,37072537,37069624,37067380,37065712	Gene ID= ENSG00000185808.13 TPM= 4.67 Transcript Type= protein_coding
chr21	37073265	37165751	37073265	37165751	+	transcript892.chr21.nic@TTC3	transcript892.chr21.nic	protein_coding	37073265,37087247,37087833,37088196,37088799,37090233,37091293,37094005,37095350,37096581,37108392,37121817,37122983,37124619,37126080,37129003,37132682,37135380,37138634,37140561,37144525,37147481,37148546,37150078,37150820,37151893,37152951,37156655,37159699,37160802,37161990,37164051,37165550	37073364,37087401,37087875,37088346,37088886,37090286,37091413,37094090,37095444,37096643,37108446,37121979,37123028,37124742,37126143,37129063,37132766,37135514,37138714,37140673,37144645,37147603,37148647,37150170,37150884,37152029,37153277,37156906,37159745,37160858,37162063,37164215,37165751	Gene ID= ENSG00000182670.13 TPM= 2.34 Transcript Type= NA
chr21	37073228	37151958	37073228	37151958	+	transcript896.chr21.nic@TTC3	transcript896.chr21.nic	protein_coding	37073228,37087247,37087833,37088196,37088799,37090233,37091293,37094005,37095350,37096581,37108392,37121817,37122983,37124619,37126080,37129003,37132682,37135380,37138634,37140561,37144525,37147481,37148546,37150078,37150820,37151893	37073473,37087401,37087875,37088346,37088886,37090286,37091413,37094090,37095444,37096643,37108446,37121979,37123028,37124742,37126143,37129063,37132766,37135514,37138714,37140673,37144645,37147603,37148647,37150170,37150884,37151958	Gene ID= ENSG00000182670.13 TPM= 2.34 Transcript Type= NA
chr21	37073267	37151958	37073267	37151958	+	ENST00000450533.5@TTC3	ENST00000450533.5	protein_coding	37073267,37087247,37087833,37088196,37088799,37090233,37091293,37094005,37095350,37096581,37108392,37121817,37122983,37124619,37126080,37129003,37132682,37135380,37138634,37140561,37144525,37147481,37148546,37150078,37150820,37151893	37073364,37087401,37087875,37088346,37088886,37090286,37091413,37094090,37095444,37096643,37108446,37121979,37123028,37124742,37126143,37129063,37132766,37135514,37138714,37140673,37144645,37147603,37148647,37150170,37150884,37151958	Gene ID= ENSG00000182670.13 TPM= 1.17 Transcript Type= protein_coding
chr21	37073268	37165751	37073268	37165751	+	transcript900.chr21.nic@TTC3	transcript900.chr21.nic	protein_coding	37073268,37108392,37121817,37122983,37124619,37126080,37129003,37132682,37135380,37138634,37140561,37144525,37147481,37148546,37150078,37150820,37151893,37152951,37156655,37159699,37160802,37161990,37164051,37165550	37073364,37108446,37121979,37123028,37124742,37126143,37129063,37132766,37135514,37138714,37140673,37144645,37147603,37148647,37150170,37150884,37152029,37153277,37156906,37159745,37160858,37162063,37164215,37165751	Gene ID= ENSG00000182670.13 TPM= 10.51 Transcript Type= NA
chr21	37073251	37165751	37073251	37165751	+	ENST00000418766.5@TTC3	ENST00000418766.5	protein_coding	37073251,37087247,37087833,37088196,37088799,37090233,37091293,37094005,37095350,37096581,37108392,37121817,37122983,37124619,37126080,37129003,37132682,37135380,37138634,37140561,37144525,37147481,37148546,37150078,37150820,37151893,37152951,37156655,37159699,37160802,37161990,37164051,37165550	37073473,37087401,37087875,37088346,37088886,37090286,37091413,37094090,37095444,37096643,37108446,37121979,37123028,37124742,37126143,37129063,37132766,37135514,37138714,37140673,37144645,37147603,37148647,37150170,37150884,37152029,37153277,37156906,37159745,37160858,37162063,37164215,37165751	Gene ID= ENSG00000182670.13 TPM= 10.51 Transcript Type= protein_coding
chr21	37073271	37203103	37073271	37203103	+	ENST00000355666.5@TTC3	ENST00000355666.5	protein_coding	37073271,37087247,37087833,37088196,37088799,37090233,37091293,37094005,37095350,37096581,37108392,37121817,37122983,37124619,37126080,37129003,37132682,37135380,37138634,37140561,37144525,37147481,37148546,37150078,37150820,37151893,37152951,37156655,37159699,37160802,37161990,37164051,37165550,37167555,37172595,37182774,37185706,37187049,37188495,37191334,37192112,37195675,37197570,37197882,37200232,37201440	37073364,37087401,37087875,37088346,37088886,37090286,37091413,37094090,37095444,37096643,37108446,37121979,37123028,37124742,37126143,37129063,37132766,37135514,37138714,37140673,37144645,37147603,37148647,37150170,37150884,37152029,37153277,37156906,37159745,37160858,37162063,37164215,37166615,37167620,37172744,37182913,37185774,37187145,37188595,37191424,37192213,37196036,37197696,37198025,37200324,37203103	Gene ID= ENSG00000182670.13 TPM= 16.35 Transcript Type= protein_coding
chr21	37073281	37153323	37073281	37153323	+	ENST00000540756.5@TTC3	ENST00000540756.5	protein_coding	37073281,37108392,37121817,37122983,37124619,37126080,37129003,37132682,37135380,37138634,37140561,37144525,37147481,37148546,37150078,37150820,37151893,37152951	37073364,37108446,37121979,37123028,37124742,37126143,37129063,37132766,37135514,37138714,37140673,37144645,37147603,37148647,37150170,37150884,37152029,37153323	Gene ID= ENSG00000182670.13 TPM= 3.5 Transcript Type= protein_coding
chr21	37073278	37077376	37073278	37077376	+	transcript903.chr21.nnic@NA	transcript903.chr21.nnic	NA	37073278	37077376	Gene ID= novel_gene_chr21_904 TPM= 2.34 Transcript Type= NA
chr21	37076696	37078203	37076696	37078203	-	transcript905.chr21.nnic@NA	transcript905.chr21.nnic	NA	37076696	37078203	Gene ID= novel_gene_chr21_906 TPM= 23.35 Transcript Type= NA
chr21	37221419	37237744	37221419	37237744	+	ENST00000440629.1@AP001432.1	ENST00000440629.1	lincRNA	37221419,37237404	37221597,37237744	Gene ID= ENSG00000242553.1 TPM= 1.17 Transcript Type= lincRNA
chr21	37223420	37267527	37223420	37267527	-	transcript908.chr21.nnic@DSCR3	transcript908.chr21.nnic	protein_coding	37267238,37240496,37238460,37233362,37232377,37228242,37227654,37223420	37267527,37240639,37238609,37233442,37232451,37228373,37227806,37225626	Gene ID= ENSG00000157538.13 TPM= 5.84 Transcript Type= NA
chr21	37223420	37267532	37223420	37267532	-	ENST00000309117.10@DSCR3	ENST00000309117.10	protein_coding	37267238,37240496,37238460,37233362,37232377,37228223,37227654,37223420	37267532,37240639,37238609,37233442,37232451,37228373,37227806,37225626	Gene ID= ENSG00000157538.13 TPM= 59.55 Transcript Type= protein_coding
chr21	37261082	37267340	37261082	37267340	-	ENST00000498789.1@DSCR3	ENST00000498789.1	protein_coding	37267238,37261082	37267340,37261937	Gene ID= ENSG00000157538.13 TPM= 3.5 Transcript Type= processed_transcript
chr21	37366795	37368869	37366795	37368869	-	transcript925.chr21.nnic@NA	transcript925.chr21.nnic	NA	37366795	37368869	Gene ID= novel_gene_chr21_926 TPM= 4.67 Transcript Type= NA
chr21	37512998	37515177	37512998	37515177	+	transcript923.chr21.nnic@NA	transcript923.chr21.nnic	NA	37512998	37515177	Gene ID= novel_gene_chr21_924 TPM= 7.01 Transcript Type= NA
chr21	38256741	38307357	38256741	38307357	+	ENST00000328656.8@KCNJ15	ENST00000328656.8	protein_coding	38256741,38257046,38296926,38299244	38256787,38257185,38297023,38307357	Gene ID= ENSG00000157551.17 TPM= 3.5 Transcript Type= protein_coding
chr21	38352279	38354890	38352279	38354890	+	transcript959.chr21.nnic@NA	transcript959.chr21.nnic	NA	38352279	38354890	Gene ID= novel_gene_chr21_960 TPM= 2.34 Transcript Type= NA
chr21	38497742	38498150	38497742	38498150	-	transcript961.chr21.nnic@NA	transcript961.chr21.nnic	NA	38497742	38498150	Gene ID= novel_gene_chr21_962 TPM= 8.17 Transcript Type= NA
chr21	38805895	38811198	38805895	38811198	+	transcript981.chr21.nnic@NA	transcript981.chr21.nnic	NA	38805895	38811198	Gene ID= novel_gene_chr21_982 TPM= 35.03 Transcript Type= NA
chr21	38821606	38824952	38821606	38824952	+	transcript983.chr21.nnic@NA	transcript983.chr21.nnic	NA	38821606	38824952	Gene ID= novel_gene_chr21_984 TPM= 23.35 Transcript Type= NA
chr21	39174769	39183851	39174769	39183851	-	ENST00000331573.7@PSMG1	ENST00000331573.7	protein_coding	39183252,39181772,39180285,39179924,39178449,39177435,39174769	39183851,39181878,39180436,39179986,39178647,39177571,39175664	Gene ID= ENSG00000183527.11 TPM= 22.18 Transcript Type= protein_coding
chr21	39184176	39313819	39184176	39313819	-	ENST00000333229.6@BRWD1	ENST00000333229.6	protein_coding	39313443,39313241,39313072,39312841,39298432,39296265,39295743,39293811,39280148,39278743,39277251,39276173,39274374,39270283,39269899,39264891,39264460,39258487,39255645,39250796,39247701,39238479,39236595,39232373,39232177,39229312,39228500,39225086,39224408,39218505,39218152,39215237,39213481,39212666,39210786,39209995,39206108,39202325,39200219,39198763,39196498,39184176	39313819,39313299,39313101,39312900,39298582,39296363,39295903,39294032,39280248,39278813,39277351,39276213,39274472,39270433,39270033,39265019,39264685,39258672,39255828,39250889,39247832,39238573,39236784,39232498,39232284,39229436,39228582,39225197,39224469,39218660,39218272,39215362,39213553,39212707,39210929,39210147,39206274,39202545,39200386,39199662,39197415,39187417	Gene ID= ENSG00000185658.13 TPM= 3.5 Transcript Type= protein_coding
chr21	39296437	39313642	39296437	39313642	-	ENST00000341322.4@BRWD1	ENST00000341322.4	protein_coding	39313443,39313241,39313072,39312841,39296437	39313642,39313299,39313101,39312900,39298582	Gene ID= ENSG00000185658.13 TPM= 14.01 Transcript Type= protein_coding
chr21	39342315	39349109	39342315	39349109	-	transcript1007.chr21.nic@HMGN1	transcript1007.chr21.nic	protein_coding	39348903,39348545,39348422,39345830,39345146,39342315	39349109,39348577,39348451,39348339,39345274,39343159	Gene ID= ENSG00000205581.10 TPM= 26.4 Transcript Type= NA
chr21	39342315	39349200	39342315	39349200	-	ENST00000380749.9@HMGN1	ENST00000380749.9	protein_coding	39348903,39348545,39348422,39348292,39345146,39342315	39349200,39348577,39348451,39348339,39345274,39343159	Gene ID= ENSG00000205581.10 TPM= 162.42 Transcript Type= protein_coding
chr21	39342315	39349099	39342315	39349099	-	ENST00000486741.5@HMGN1	ENST00000486741.5	protein_coding	39348903,39348545,39348422,39345146,39342315	39349099,39348577,39348451,39348339,39343159	Gene ID= ENSG00000205581.10 TPM= 4.8 Transcript Type= retained_intron
chr21	39380244	39397889	39380244	39397889	+	ENST00000333781.9@WRB	ENST00000333781.9	protein_coding	39380244,39390698,39391769,39393166,39396866	39380486,39390863,39391836,39393280,39397889	Gene ID= ENSG00000182093.14 TPM= 60.71 Transcript Type= protein_coding
chr21	39387765	39397889	39387765	39397889	+	ENST00000380708.5@WRB	ENST00000380708.5	protein_coding	39387765,39390698,39391769,39393166,39396866	39387855,39390863,39391836,39393280,39397889	Gene ID= ENSG00000182093.14 TPM= 1.17 Transcript Type= protein_coding
chr21	39405970	39409333	39405970	39409333	+	transcript1023.chr21.nnic@NA	transcript1023.chr21.nnic	NA	39405970	39409333	Gene ID= novel_gene_chr21_1024 TPM= 2.34 Transcript Type= NA
chr21	39445855	39515506	39445855	39515506	+	ENST00000380637.7@SH3BGR	ENST00000380637.7	protein_coding	39445855,39462375,39475135,39499823,39508998,39511680,39515088	39445929,39462560,39475215,39499915,39509027,39511809,39515506	Gene ID= ENSG00000185437.13 TPM= 1.17 Transcript Type= protein_coding
chr21	41167801	41276597	41167801	41276597	+	ENST00000330333.10@BACE2	ENST00000330333.10	protein_coding	41167801,41226266,41237513,41241819,41243376,41245962,41250752,41257158,41275371	41168575,41226354,41237729,41241947,41243510,41246063,41250901,41257326,41276597	Gene ID= ENSG00000182240.15 TPM= 9.34 Transcript Type= protein_coding
chr21	41184571	41189206	41184571	41189206	+	transcript1034.chr21.nnic@NA	transcript1034.chr21.nnic	NA	41184571	41189206	Gene ID= novel_gene_chr21_1035 TPM= 2.34 Transcript Type= NA
chr21	41316734	41357431	41316734	41357431	+	ENST00000357985.6@FAM3B	ENST00000357985.6	protein_coding	41316734,41322923,41338378,41344476,41345686,41347013,41348592,41357108	41316898,41323066,41338501,41344534,41345736,41347100,41348724,41357431	Gene ID= ENSG00000183844.16 TPM= 2.34 Transcript Type= protein_coding
chr21	41362030	41408943	41362030	41408943	+	transcript1040.chr21.nic@MX2	transcript1040.chr21.nic	protein_coding	41362030,41363269,41376836,41377789,41380017,41382410,41390565,41395587,41397613,41398897,41399196,41401970,41403267,41406744,41407991	41362055,41363389,41377155,41377981,41380151,41382564,41390703,41395785,41397691,41399019,41399337,41402128,41403343,41406998,41408943	Gene ID= ENSG00000183486.12 TPM= 4.09 Transcript Type= NA
chr21	41361943	41408943	41361943	41408943	+	ENST00000330714.7@MX2	ENST00000330714.7	protein_coding	41361943,41376836,41377789,41380017,41382410,41390565,41395587,41397613,41398897,41399196,41401970,41403267,41406744,41407991	41362055,41377155,41377981,41380151,41382564,41390703,41395785,41397691,41399019,41399337,41402128,41403343,41406998,41408943	Gene ID= ENSG00000183486.12 TPM= 35.61 Transcript Type= protein_coding
chr21	41362021	41381707	41362021	41381707	+	transcript1047.chr21.nic@MX2	transcript1047.chr21.nic	protein_coding	41362021,41376836,41377789,41380017	41362055,41377155,41377981,41381707	Gene ID= ENSG00000183486.12 TPM= 5.84 Transcript Type= NA
chr21	41420515	41459214	41420515	41459214	+	ENST00000398600.6@MX1	ENST00000398600.6	protein_coding	41420515,41421838,41422756,41427206,41427755,41430533,41432050,41435837,41437015,41439694,41440887,41441716,41443788,41445448,41446000,41449137,41451167,41452621,41458528	41420817,41422095,41422911,41427304,41427866,41430608,41432175,41436029,41437152,41439848,41441025,41441914,41443866,41445570,41446141,41449295,41451243,41452869,41459214	Gene ID= ENSG00000157601.13 TPM= 9.26 Transcript Type= protein_coding
chr21	41426212	41459213	41426212	41459213	+	transcript1056.chr21.nic@MX1	transcript1056.chr21.nic	protein_coding	41426212,41427206,41427755,41430533,41432031,41435837,41437015,41439694,41440887,41441716,41443788,41445448,41446000,41449137,41451167,41452621,41458528	41426263,41427304,41427866,41430608,41432175,41436029,41437152,41439848,41441025,41441914,41443866,41445570,41446141,41449295,41451243,41452869,41459213	Gene ID= ENSG00000157601.13 TPM= 10.63 Transcript Type= NA
chr21	41426167	41459214	41426167	41459214	+	ENST00000398598.7@MX1	ENST00000398598.7	protein_coding	41426167,41427206,41427755,41430533,41432050,41435837,41437015,41439694,41440887,41441716,41443788,41445448,41446000,41449137,41451167,41452621,41458528	41426263,41427304,41427866,41430608,41432175,41436029,41437152,41439848,41441025,41441914,41443866,41445570,41446141,41449295,41451243,41452869,41459214	Gene ID= ENSG00000157601.13 TPM= 150.54 Transcript Type= protein_coding
chr21	41426125	41459213	41426125	41459213	+	transcript1064.chr21.nic@MX1	transcript1064.chr21.nic	protein_coding	41426125,41427755,41430533,41432050,41435837,41437015,41439694,41440887,41441716,41443788,41445448,41446000,41449137,41451167,41452621,41458528	41426263,41427866,41430608,41432175,41436029,41437152,41439848,41441025,41441914,41443866,41445570,41446141,41449295,41451243,41452869,41459213	Gene ID= ENSG00000157601.13 TPM= 15.3 Transcript Type= NA
chr21	41444319	41459213	41444319	41459213	+	transcript1068.chr21.nic@MX1	transcript1068.chr21.nic	protein_coding	41444319,41446000,41449137,41451167,41452621,41458528	41445570,41446141,41449295,41451243,41452869,41459213	Gene ID= ENSG00000157601.13 TPM= 6.81 Transcript Type= NA
chr21	41464551	41508177	41464551	41508177	-	transcript1083.chr21.nic@TMPRSS2	transcript1083.chr21.nic	protein_coding	41508081,41498119,41489507,41488394,41480476,41479172,41476577,41473325,41471806,41470648,41468396,41467734,41464551	41508177,41498189,41489593,41488513,41480602,41479282,41476620,41473496,41471981,41470743,41468538,41467886,41466153	Gene ID= ENSG00000184012.11 TPM= 8.5 Transcript Type= NA
chr21	41464551	41508177	41464551	41508177	-	transcript1086.chr21.nic@TMPRSS2	transcript1086.chr21.nic	protein_coding	41508081,41498119,41494356,41489507,41480476,41479172,41476577,41473325,41471806,41470648,41468396,41467734,41464551	41508177,41498189,41494578,41489593,41480602,41479282,41476620,41473496,41471981,41470743,41468538,41467886,41466153	Gene ID= ENSG00000184012.11 TPM= 9.28 Transcript Type= NA
chr21	41464551	41508159	41464551	41508159	-	ENST00000332149.9@TMPRSS2	ENST00000332149.9	protein_coding	41508081,41498119,41494356,41489507,41488394,41480476,41479172,41476577,41473325,41471806,41470648,41468396,41467734,41464551	41508159,41498189,41494578,41489593,41488513,41480602,41479282,41476620,41473496,41471981,41470743,41468538,41467886,41466153	Gene ID= ENSG00000184012.11 TPM= 121.76 Transcript Type= protein_coding
chr21	41483795	41489492	41483795	41489492	-	transcript1095.chr21.nnic@NA	transcript1095.chr21.nnic	NA	41483795	41489492	Gene ID= novel_gene_chr21_1096 TPM= 4.67 Transcript Type= NA
chr21	41739369	41767106	41739369	41767106	-	ENST00000332512.7@RIPK4	ENST00000332512.7	protein_coding	41766860,41756525,41751097,41749154,41746613,41745759,41743882,41739369	41767106,41756816,41751245,41749203,41746771,41745862,41744140,41741997	Gene ID= ENSG00000183421.11 TPM= 36.2 Transcript Type= protein_coding
chr21	41911389	41954012	41911389	41954012	-	transcript1109.chr21.nic@C2CD2	transcript1109.chr21.nic	protein_coding	41953370,41942147,41921972,41918856,41918105,41914598,41911389	41954012,41942245,41922085,41918960,41918227,41914721,41912440	Gene ID= ENSG00000157617.16 TPM= 4.67 Transcript Type= NA
chr21	41885112	41953890	41885112	41953890	-	ENST00000380486.3@C2CD2	ENST00000380486.3	protein_coding	41953370,41942147,41921972,41918856,41918105,41914598,41912332,41909459,41907660,41906992,41905724,41901622,41899053,41885112	41953890,41942245,41922085,41918960,41918227,41914721,41912440,41909523,41907784,41907166,41905837,41901749,41899362,41889344	Gene ID= ENSG00000157617.16 TPM= 14.01 Transcript Type= protein_coding
chr21	41988637	42010387	41988637	42010387	-	ENST00000398511.3@ZBTB21	ENST00000398511.3	protein_coding	42010252,41988637	42010387,41994108	Gene ID= ENSG00000173276.13 TPM= 4.67 Transcript Type= protein_coding
chr21	41986831	42010357	41986831	42010357	-	ENST00000310826.9@ZBTB21	ENST00000310826.9	protein_coding	42010252,42002897,41986831	42010357,42002961,41994108	Gene ID= ENSG00000173276.13 TPM= 5.84 Transcript Type= protein_coding
chr21	42219118	42297244	42219118	42297244	+	ENST00000361802.6@ABCG1	ENST00000361802.6	protein_coding	42219118,42225671,42271070,42273303,42276895,42282274,42284560,42285880,42287889,42288211,42290050,42291092,42291498,42294542,42296164	42219304,42225914,42271187,42273435,42276945,42282419,42284683,42285994,42288073,42288312,42290218,42291192,42291656,42294660,42297244	Gene ID= ENSG00000160179.18 TPM= 45.38 Transcript Type= protein_coding
chr21	42219118	42297244	42219118	42297244	+	ENST00000398449.7@ABCG1	ENST00000398449.7	protein_coding	42219118,42225671,42271070,42273303,42276895,42282274,42284560,42285880,42287889,42288211,42290050,42291092,42291498,42294542,42296164	42219304,42225914,42271187,42273435,42276945,42282419,42284683,42285994,42288037,42288312,42290218,42291192,42291656,42294660,42297244	Gene ID= ENSG00000160179.18 TPM= 122.45 Transcript Type= protein_coding
chr21	42219821	42297244	42219821	42297244	+	ENST00000343687.7@ABCG1	ENST00000343687.7	protein_coding	42219821,42225671,42271070,42273303,42276895,42282274,42284560,42285880,42287889,42288211,42290050,42291092,42291498,42294542,42296164	42220046,42225914,42271187,42273435,42276945,42282419,42284683,42285994,42288037,42288312,42290218,42291192,42291656,42294660,42297244	Gene ID= ENSG00000160179.18 TPM= 5.69 Transcript Type= protein_coding
chr21	42223020	42229727	42223020	42229727	+	transcript1133.chr21.nnic@NA	transcript1133.chr21.nnic	NA	42223020	42229727	Gene ID= novel_gene_chr21_1134 TPM= 3.5 Transcript Type= NA
chr21	42245911	42248921	42245911	42248921	+	transcript1135.chr21.nnic@NA	transcript1135.chr21.nnic	NA	42245911	42248921	Gene ID= novel_gene_chr21_1136 TPM= 2.34 Transcript Type= NA
chr21	42274477	42278287	42274477	42278287	-	transcript1143.chr21.nnic@NA	transcript1143.chr21.nnic	NA	42274477	42278287	Gene ID= novel_gene_chr21_1144 TPM= 5.84 Transcript Type= NA
chr21	42296626	42300214	42296626	42300214	-	transcript1141.chr21.nnic@NA	transcript1141.chr21.nnic	NA	42296626	42300214	Gene ID= novel_gene_chr21_1142 TPM= 7.2 Transcript Type= NA
chr21	42298912	42300786	42298912	42300786	+	transcript1139.chr21.nnic@NA	transcript1139.chr21.nnic	NA	42298912	42300786	Gene ID= novel_gene_chr21_1140 TPM= 2.34 Transcript Type= NA
chr21	42300205	42304388	42300205	42304388	+	transcript1131.chr21.nnic@NA	transcript1131.chr21.nnic	NA	42300205	42304388	Gene ID= novel_gene_chr21_1132 TPM= 4.67 Transcript Type= NA
chr21	42312053	42315538	42312053	42315538	-	transcript1145.chr21.nic@TFF3	transcript1145.chr21.nic	protein_coding	42315293,42313495,42313485,42312053	42315538,42313631,42313493,42312269	Gene ID= ENSG00000160180.15 TPM= 5.84 Transcript Type= NA
chr21	42311667	42315651	42311667	42315651	-	ENST00000518498.1@TFF3	ENST00000518498.1	protein_coding	42315293,42313485,42311667	42315651,42313631,42312269	Gene ID= ENSG00000160180.15 TPM= 2.34 Transcript Type= protein_coding
chr21	42312052	42315520	42312052	42315520	-	transcript1147.chr21.nnic@NA	transcript1147.chr21.nnic	NA	42312052	42315520	Gene ID= novel_gene_chr21_1148 TPM= 2.34 Transcript Type= NA
chr21	42371890	42396846	42371890	42396846	-	ENST00000291532.7@TMPRSS3	ENST00000291532.7	protein_coding	42395942,42395324,42389927,42388929,42388403,42385409,42383970,42383033,42382065,42380117,42376541,42375716,42371890	42396846,42395468,42390037,42389045,42388526,42385534,42384013,42383198,42382234,42380212,42376686,42375868,42372779	Gene ID= ENSG00000160183.13 TPM= 3.5 Transcript Type= protein_coding
chr21	42381876	42396091	42381876	42396091	-	ENST00000398397.3@TMPRSS3	ENST00000398397.3	protein_coding	42395942,42395324,42389927,42388929,42388403,42385409,42383970,42383033,42381876	42396091,42395468,42390037,42389045,42388526,42385534,42384013,42383198,42382234	Gene ID= ENSG00000160183.13 TPM= 1.17 Transcript Type= protein_coding
chr21	42371890	42396059	42371890	42396059	-	ENST00000433957.6@TMPRSS3	ENST00000433957.6	protein_coding	42395942,42395324,42389927,42388929,42388403,42385409,42383970,42383033,42382065,42380117,42376541,42375716,42371890	42396059,42395468,42390037,42389045,42388526,42385534,42384013,42383198,42382234,42380212,42376683,42375868,42372779	Gene ID= ENSG00000160183.13 TPM= 2.34 Transcript Type= protein_coding
chr21	42472486	42496354	42472486	42496354	-	ENST00000291536.7@RSPH1	ENST00000291536.7	protein_coding	42496133,42492966,42492758,42486371,42485669,42482637,42477291,42475898,42472486	42496354,42493079,42492863,42486461,42485804,42482708,42477444,42476047,42472870	Gene ID= ENSG00000160188.9 TPM= 1.17 Transcript Type= protein_coding
chr21	42513680	42581440	42513680	42581440	+	transcript1158.chr21.nic@SLC37A1	transcript1158.chr21.nic	protein_coding	42513680,42514631,42514870,42518277,42525776,42534698,42535472,42539512,42542404,42543436,42547103,42554062,42558958,42562078,42563815,42564708,42565827,42566985,42568360,42574818,42579736,42580345	42513924,42514717,42514935,42518510,42525857,42534830,42535550,42539647,42542480,42543602,42547140,42554142,42559089,42562168,42563877,42564793,42565875,42567058,42568438,42574915,42579800,42581440	Gene ID= ENSG00000160190.13 TPM= 5.52 Transcript Type= NA
chr21	42513680	42581440	42513680	42581440	+	transcript1160.chr21.nic@SLC37A1	transcript1160.chr21.nic	protein_coding	42513680,42514631,42518277,42525776,42534698,42535472,42539512,42542404,42543436,42547103,42554062,42558958,42562078,42563815,42564708,42565827,42566985,42568360,42574818,42579736,42580345	42513924,42514717,42518510,42525857,42534830,42535550,42539647,42542480,42543602,42547140,42554142,42559089,42562168,42563877,42564793,42565875,42567058,42568438,42574915,42579800,42581440	Gene ID= ENSG00000160190.13 TPM= 20.7 Transcript Type= NA
chr21	42513853	42581440	42513853	42581440	+	transcript1161.chr21.nnic@SLC37A1	transcript1161.chr21.nnic	protein_coding	42513853,42514870,42518277,42525776,42534698,42535472,42539512,42542404,42543436,42547103,42554062,42558958,42562078,42563815,42564708,42565827,42566985,42568360,42574818,42579736,42580345	42513924,42514935,42518510,42525857,42534830,42535550,42539647,42542480,42543602,42547140,42554142,42559089,42562168,42563877,42564793,42565875,42567058,42568438,42574915,42579800,42581440	Gene ID= ENSG00000160190.13 TPM= 5.52 Transcript Type= NA
chr21	42513818	42581440	42513818	42581440	+	transcript1169.chr21.nnic@SLC37A1	transcript1169.chr21.nnic	protein_coding	42513818,42518277,42525776,42534698,42535472,42539512,42542404,42543436,42547103,42554062,42558958,42562078,42563815,42564708,42565827,42566985,42568360,42574818,42579736,42580345	42513924,42518510,42525857,42534830,42535550,42539647,42542480,42543602,42547140,42554142,42559089,42562168,42563877,42564793,42565875,42567058,42568438,42574915,42579800,42581440	Gene ID= ENSG00000160190.13 TPM= 24.2 Transcript Type= NA
chr21	42514474	42575947	42514474	42575947	+	transcript1170.chr21.nic@SLC37A1	transcript1170.chr21.nic	protein_coding	42514474,42518277,42525776,42534698,42535472,42539512,42542404,42543436,42547103,42554062,42558958,42562078,42563815,42564708,42565827,42566985,42568360,42574818,42575767	42514717,42518510,42525857,42534830,42535550,42539647,42542480,42543602,42547140,42554142,42559089,42562168,42563877,42564793,42565875,42567058,42568438,42574915,42575947	Gene ID= ENSG00000160190.13 TPM= 2.34 Transcript Type= NA
chr21	42513914	42581440	42513914	42581440	+	ENST00000352133.2@SLC37A1	ENST00000352133.2	protein_coding	42513914,42518277,42525776,42534698,42535472,42539512,42542404,42543436,42547103,42554062,42558958,42562078,42563815,42564708,42565827,42566985,42568360,42574818,42579736,42580345	42514717,42518510,42525857,42534830,42535550,42539647,42542480,42543602,42547140,42554142,42559089,42562168,42563877,42564793,42565875,42567058,42568438,42574915,42579800,42581440	Gene ID= ENSG00000160190.13 TPM= 16.03 Transcript Type= protein_coding
chr21	42578214	42581419	42578214	42581419	+	transcript1176.chr21.nnic@NA	transcript1176.chr21.nnic	NA	42578214	42581419	Gene ID= novel_gene_chr21_1177 TPM= 5.06 Transcript Type= NA
chr21	42599280	42615058	42599280	42615058	-	ENST00000419628.1@LINC01671	ENST00000419628.1	lincRNA	42614853,42599280	42615058,42600848	Gene ID= ENSG00000225431.1 TPM= 1.17 Transcript Type= lincRNA
chr21	42843094	42844619	42843094	42844619	-	transcript1194.chr21.nnic@NA	transcript1194.chr21.nnic	NA	42843094	42844619	Gene ID= novel_gene_chr21_1195 TPM= 5.84 Transcript Type= NA
chr21	42843094	42879531	42843094	42879531	-	ENST00000330317.6@WDR4	ENST00000330317.6	protein_coding	42879407,42876702,42873551,42863440,42862282,42859662,42855682,42854562,42853569,42852255,42850041,42843094	42879531,42876767,42873691,42863596,42862394,42859722,42855780,42854626,42853752,42852324,42850242,42843281	Gene ID= ENSG00000160193.11 TPM= 8.17 Transcript Type= protein_coding
chr21	42893265	42909105	42893265	42909105	+	ENST00000354250.6@NDUFV3	ENST00000354250.6	protein_coding	42893265,42896927,42903182,42908864	42893381,42897047,42904276,42909105	Gene ID= ENSG00000160194.17 TPM= 33.86 Transcript Type= protein_coding
chr21	42893268	42913304	42893268	42913304	+	ENST00000340344.4@NDUFV3	ENST00000340344.4	protein_coding	42893268,42896927,42908864	42893381,42897047,42913304	Gene ID= ENSG00000160194.17 TPM= 32.69 Transcript Type= protein_coding
chr21	43053191	43075873	43053191	43075873	-	transcript1214.chr21.nic@CBS	transcript1214.chr21.nic	protein_coding	43075770,43073266,43071985,43068509,43066243,43065616,43065387,43065203,43063900,43062953,43062311,43060441,43059226,43058834,43058145,43056803,43056058,43053191	43075873,43073341,43072201,43068615,43066377,43065695,43065521,43065272,43063991,43063078,43062395,43060546,43059303,43058968,43058253,43056887,43056099,43053983	Gene ID= ENSG00000160200.17 TPM= 9.67 Transcript Type= NA
chr21	43053191	43075870	43053191	43075870	-	transcript1224.chr21.nic@CBS	transcript1224.chr21.nic	protein_coding	43075770,43073266,43071985,43067778,43066243,43065616,43065387,43065203,43063900,43062953,43062311,43060441,43059226,43058834,43058145,43056803,43053191	43075870,43073341,43072201,43068615,43066377,43065695,43065521,43065272,43063991,43063078,43062395,43060546,43059303,43058968,43058253,43056887,43053983	Gene ID= ENSG00000160200.17 TPM= 12.15 Transcript Type= NA
chr21	43053191	43075945	43053191	43075945	-	ENST00000398165.7@CBS	ENST00000398165.7	protein_coding	43075770,43073266,43071985,43068509,43066243,43065616,43065387,43065203,43063900,43062953,43062311,43060441,43059226,43058834,43058145,43056803,43053191	43075945,43073341,43072201,43068615,43066377,43065695,43065521,43065272,43063991,43063078,43062395,43060546,43059303,43058968,43058253,43056887,43053983	Gene ID= ENSG00000160200.17 TPM= 157.32 Transcript Type= protein_coding
chr21	43053191	43076378	43053191	43076378	-	ENST00000352178.9@CBS	ENST00000352178.9	protein_coding	43076225,43073266,43071985,43068509,43066243,43065616,43065387,43065203,43063900,43062953,43062311,43060441,43059226,43058834,43058145,43056803,43053191	43076378,43073341,43072201,43068615,43066377,43065695,43065521,43065272,43063991,43063078,43062395,43060546,43059303,43058968,43058253,43056887,43053983	Gene ID= ENSG00000160200.17 TPM= 10.2 Transcript Type= protein_coding
chr21	43053191	43075831	43053191	43075831	-	ENST00000398158.5@CBS	ENST00000398158.5	protein_coding	43075770,43073266,43071985,43068509,43066243,43065616,43065387,43065203,43063900,43062953,43062311,43060441,43059226,43058834,43058145,43056803,43053191	43075831,43073303,43072201,43068615,43066377,43065695,43065521,43065272,43063991,43063078,43062395,43060546,43059303,43058968,43058253,43056887,43053983	Gene ID= ENSG00000160200.17 TPM= 11.37 Transcript Type= protein_coding
chr21	43092956	43107587	43092956	43107587	-	ENST00000291552.8@U2AF1	ENST00000291552.8	protein_coding	43107451,43104315,43100453,43095694,43095438,43094655,43094471,43092956	43107587,43104402,43100519,43095743,43095536,43094788,43094563,43093249	Gene ID= ENSG00000160201.11 TPM= 61.1 Transcript Type= protein_coding
chr21	43092956	43107565	43092956	43107565	-	ENST00000380276.6@U2AF1	ENST00000380276.6	protein_coding	43107451,43104315,43101366,43095694,43095438,43094655,43094471,43092956	43107565,43104402,43101432,43095743,43095536,43094788,43094563,43093249	Gene ID= ENSG00000160201.11 TPM= 28.41 Transcript Type= protein_coding
chr21	43092957	43107578	43092957	43107578	-	ENST00000398137.5@U2AF1	ENST00000398137.5	protein_coding	43107451,43104315,43101366,43100453,43095694,43095438,43094655,43094471,43092957	43107578,43104402,43101432,43100519,43095743,43095536,43094788,43094563,43093249	Gene ID= ENSG00000160201.11 TPM= 3.89 Transcript Type= protein_coding
chr21	43092956	43107524	43092956	43107524	-	ENST00000475639.5@U2AF1	ENST00000475639.5	protein_coding	43107451,43100453,43095694,43095438,43094655,43094471,43092956	43107524,43104402,43095743,43095536,43094788,43094563,43093249	Gene ID= ENSG00000160201.11 TPM= 1.17 Transcript Type= retained_intron
chr21	43097622	43107524	43097622	43107524	-	ENST00000496462.1@U2AF1	ENST00000496462.1	protein_coding	43107451,43104315,43097622	43107524,43104402,43101432	Gene ID= ENSG00000160201.11 TPM= 3.5 Transcript Type= retained_intron
chr21	43358147	43362349	43358147	43362349	-	ENST00000442815.1@LINC01679	ENST00000442815.1	lincRNA	43360892,43358147	43362349,43359486	Gene ID= ENSG00000237989.1 TPM= 1.17 Transcript Type= lincRNA
chr21	43414515	43427128	43414515	43427128	-	ENST00000270162.6@SIK1	ENST00000270162.6	protein_coding	43427010,43426023,43425407,43421974,43421638,43421243,43421010,43420234,43419859,43419353,43419021,43418260,43417543,43414515	43427128,43426192,43425523,43422037,43421799,43421367,43421133,43420457,43420005,43419478,43419237,43418541,43417774,43417117	Gene ID= ENSG00000142178.7 TPM= 30.36 Transcript Type= protein_coding
chr21	43674587	43678447	43674587	43678447	+	transcript1262.chr21.nic@RRP1B	transcript1262.chr21.nic	protein_coding	43674587,43676272,43676733	43675163,43676336,43678447	Gene ID= ENSG00000160208.12 TPM= 2.34 Transcript Type= NA
chr21	43659548	43696079	43659548	43696079	+	ENST00000340648.5@RRP1B	ENST00000340648.5	protein_coding	43659548,43669884,43672308,43673870,43674636,43675034,43676272,43676733,43683279,43684553,43685770,43686804,43687516,43690288,43691439,43693190	43659794,43669966,43672365,43673955,43674697,43675163,43676336,43676914,43683373,43684650,43685789,43686935,43688240,43690440,43691502,43696079	Gene ID= ENSG00000160208.12 TPM= 32.69 Transcript Type= protein_coding
chr21	43719112	43762307	43719112	43762307	+	ENST00000291565.8@PDXK	ENST00000291565.8	protein_coding	43719112,43734069,43741667,43743724,43746079,43748995,43750500,43752518,43753583,43755698,43755951	43719381,43734123,43741771,43743807,43746125,43749080,43750545,43752629,43753719,43755764,43762307	Gene ID= ENSG00000160209.18 TPM= 344.44 Transcript Type= protein_coding
chr21	43722389	43724852	43722389	43724852	+	transcript1279.chr21.nnic@NA	transcript1279.chr21.nnic	NA	43722389	43724852	Gene ID= novel_gene_chr21_1280 TPM= 3.5 Transcript Type= NA
chr21	43734208	43738857	43734208	43738857	+	transcript1283.chr21.nnic@NA	transcript1283.chr21.nnic	NA	43734208	43738857	Gene ID= novel_gene_chr21_1284 TPM= 16.35 Transcript Type= NA
chr21	43774002	43776345	43774002	43776345	-	ENST00000480147.2@CSTB	ENST00000480147.2	protein_coding	43774002	43776345	Gene ID= ENSG00000160213.6 TPM= 1.17 Transcript Type= retained_intron
chr21	43772521	43776318	43772521	43776318	-	ENST00000640406.1@CSTB	ENST00000640406.1	protein_coding	43776204,43772521	43776318,43774759	Gene ID= ENSG00000160213.6 TPM= 4.67 Transcript Type= protein_coding
chr21	43789513	43805293	43789513	43805293	+	ENST00000497547.1@RRP1	ENST00000497547.1	protein_coding	43789513,43791350,43792672,43793319,43795189,43797422,43797631,43797907,43799570,43800517,43800862,43802274,43803512	43789762,43791432,43792729,43793404,43795250,43797551,43797695,43798100,43799649,43800614,43800881,43802387,43805293	Gene ID= ENSG00000160214.12 TPM= 54.88 Transcript Type= protein_coding
chr21	43789529	43804099	43789529	43804099	+	transcript1295.chr21.nic@RRP1	transcript1295.chr21.nic	protein_coding	43789529,43791350,43792672,43795189,43797422,43797631,43797907,43799570,43800517,43800862,43802274,43803512	43789762,43791432,43793404,43795250,43797551,43797695,43798100,43799649,43800614,43800881,43802387,43804099	Gene ID= ENSG00000160214.12 TPM= 4.67 Transcript Type= NA
chr21	43789529	43804099	43789529	43804099	+	transcript1297.chr21.nic@RRP1	transcript1297.chr21.nic	protein_coding	43789529,43791350,43792672,43795189,43797422,43797631,43797907,43799570,43800517,43800862,43802274	43789762,43791432,43793404,43795250,43797551,43797695,43798100,43799649,43800614,43800881,43804099	Gene ID= ENSG00000160214.12 TPM= 3.5 Transcript Type= NA
chr21	43802335	43804099	43802335	43804099	+	transcript1305.chr21.nnic@RRP1	transcript1305.chr21.nnic	protein_coding	43802335,43803512	43803417,43804099	Gene ID= ENSG00000160214.12 TPM= 3.5 Transcript Type= NA
chr21	43805758	43812567	43805758	43812567	-	ENST00000400385.2@AATBC	ENST00000400385.2	antisense_RNA	43808801,43805758	43812567,43806588	Gene ID= ENSG00000215458.8 TPM= 5.84 Transcript Type= antisense_RNA
chr21	43865186	43986536	43865186	43986536	+	ENST00000291572.12@AGPAT3	ENST00000291572.12	protein_coding	43865186,43903957,43959634,43967946,43969118,43970653,43971388,43978046,43980989,43982304	43865345,43904019,43959859,43968115,43969279,43970806,43971490,43978121,43981187,43986536	Gene ID= ENSG00000160216.18 TPM= 25.69 Transcript Type= protein_coding
chr21	44011806	44012690	44011806	44012690	-	transcript1340.chr21.nnic@NA	transcript1340.chr21.nnic	NA	44011806	44012690	Gene ID= novel_gene_chr21_1341 TPM= 2.34 Transcript Type= NA
chr21	44107290	44131181	44107290	44131181	+	ENST00000291576.11@PWP2	ENST00000291576.11	protein_coding	44107290,44108984,44113753,44114179,44114625,44115264,44115691,44117820,44118763,44119387,44120348,44120631,44120952,44122177,44124580,44126011,44126900,44127932,44128247,44128552,44130597	44107434,44109096,44113847,44114278,44114768,44115399,44115920,44117963,44118833,44119523,44120496,44120778,44121102,44122357,44124727,44126119,44126965,44128150,44128397,44128626,44131181	Gene ID= ENSG00000241945.7 TPM= 33.86 Transcript Type= protein_coding
chr21	44133605	44145723	44133605	44145723	+	ENST00000291577.10@C21orf33	ENST00000291577.10	protein_coding	44133605,44134102,44136060,44137177,44140250,44143205,44144821	44133838,44134154,44136173,44137296,44140342,44143361,44145723	Gene ID= ENSG00000160221.16 TPM= 64.22 Transcript Type= protein_coding
chr21	44145051	44147812	44145051	44147812	-	transcript1355.chr21.nnic@NA	transcript1355.chr21.nnic	NA	44145051	44147812	Gene ID= novel_gene_chr21_1356 TPM= 7.01 Transcript Type= NA
chr21	44300051	44327376	44300051	44327376	+	ENST00000397961.6@PFKL	ENST00000397961.6	protein_coding	44300051,44304275,44305257,44305800,44306681,44311006,44312105,44312978,44313638,44313913,44316244,44316432,44318470,44319351,44320084,44321729,44322133,44322962,44323766,44324491,44324856,44325153,44325961,44326159,44326715	44300190,44304455,44305417,44305935,44306754,44311083,44312294,44313143,44313682,44314021,44316339,44316524,44318595,44319415,44320147,44321875,44322203,44323049,44323918,44324655,44324917,44325264,44326060,44326264,44327376	Gene ID= ENSG00000141959.16 TPM= 15.94 Transcript Type= nonsense_mediated_decay
chr21	44300028	44327376	44300028	44327376	+	transcript1391.chr21.nic@PFKL	transcript1391.chr21.nic	protein_coding	44300028,44306681,44311006,44312105,44312978,44313638,44313913,44316244,44316432,44318470,44319351,44321729,44322133,44322962,44323766,44324491,44324856,44325153,44325961,44326159,44326715	44300190,44306754,44311083,44312294,44313143,44313682,44314021,44316339,44316524,44318595,44320147,44321875,44322203,44323049,44323918,44324655,44324917,44325264,44326060,44326264,44327376	Gene ID= ENSG00000141959.16 TPM= 23.27 Transcript Type= NA
chr21	44300051	44327376	44300051	44327376	+	ENST00000349048.8@PFKL	ENST00000349048.8	protein_coding	44300051,44306681,44311006,44312105,44312978,44313638,44313913,44316244,44316432,44318470,44319351,44320084,44321729,44322133,44322962,44323766,44324491,44324856,44325153,44325961,44326159,44326715	44300190,44306754,44311083,44312294,44313143,44313682,44314021,44316339,44316524,44318595,44319415,44320147,44321875,44322203,44323049,44323918,44324655,44324917,44325264,44326060,44326264,44327376	Gene ID= ENSG00000141959.16 TPM= 497.86 Transcript Type= protein_coding
chr21	44319867	44327376	44319867	44327376	+	ENST00000467315.5@PFKL	ENST00000467315.5	protein_coding	44319867,44321729,44322133,44322962,44323766,44324491,44324856,44325153,44325961,44326159,44326715	44320147,44321875,44322203,44323049,44323918,44324655,44324917,44325264,44326060,44326264,44327376	Gene ID= ENSG00000141959.16 TPM= 5.46 Transcript Type= retained_intron
chr21	44328657	44332400	44328657	44332400	+	transcript1441.chr21.nnic@NA	transcript1441.chr21.nnic	NA	44328657	44332400	Gene ID= novel_gene_chr21_1442 TPM= 18.68 Transcript Type= NA
chr21	44328944	44339388	44328944	44339388	-	transcript1427.chr21.nnic@C21orf2	transcript1427.chr21.nnic	protein_coding	44339118,44337649,44333033,44331843,44330823,44328944	44339388,44337667,44333262,44332014,44330919,44330326	Gene ID= ENSG00000160226.15 TPM= 3.5 Transcript Type= NA
chr21	44328944	44334533	44328944	44334533	-	transcript1434.chr21.nic@C21orf2	transcript1434.chr21.nic	protein_coding	44333033,44331843,44330823,44328944	44334533,44332014,44330919,44330326	Gene ID= ENSG00000160226.15 TPM= 2.34 Transcript Type= NA
chr21	44328944	44339402	44328944	44339402	-	ENST00000339818.8@C21orf2	ENST00000339818.8	protein_coding	44339118,44337649,44335758,44333033,44331843,44330823,44328944	44339402,44337667,44335804,44333262,44332014,44330919,44330326	Gene ID= ENSG00000160226.15 TPM= 15.18 Transcript Type= protein_coding
chr21	44329891	44339402	44329891	44339402	-	ENST00000325223.7@C21orf2	ENST00000325223.7	protein_coding	44339118,44337649,44335758,44333033,44331843,44330823,44329891	44339402,44337667,44335804,44333262,44332014,44330916,44330326	Gene ID= ENSG00000160226.15 TPM= 16.93 Transcript Type= protein_coding
chr21	44329891	44339393	44329891	44339393	-	ENST00000397956.7@C21orf2	ENST00000397956.7	protein_coding	44339118,44337649,44335758,44333033,44331843,44330463,44329891	44339393,44337667,44335804,44333262,44332014,44330916,44330326	Gene ID= ENSG00000160226.15 TPM= 1.75 Transcript Type= protein_coding
chr21	44334668	44336807	44334668	44336807	+	transcript1439.chr21.nnic@AP001062.1	transcript1439.chr21.nnic	antisense_RNA	44334668,44335993	44335941,44336807	Gene ID= ENSG00000184441.4 TPM= 2.34 Transcript Type= NA
chr21	44334855	44337099	44334855	44337099	+	transcript1440.chr21.nnic@AP001062.1	transcript1440.chr21.nnic	antisense_RNA	44334855,44335993	44335941,44337099	Gene ID= ENSG00000184441.4 TPM= 2.34 Transcript Type= NA
chr21	44455486	44462196	44455486	44462196	+	ENST00000291592.5@LRRC3	ENST00000291592.5	protein_coding	44455486,44456498	44455655,44462196	Gene ID= ENSG00000160233.7 TPM= 4.67 Transcript Type= protein_coding
chr21	44506807	44516575	44506807	44516575	+	ENST00000451035.2@TSPEAR-AS1	ENST00000451035.2	antisense_RNA	44506807,44508037,44508727,44509252,44509823,44515497	44507099,44508309,44508929,44509406,44509927,44516575	Gene ID= ENSG00000235890.2 TPM= 1.17 Transcript Type= antisense_RNA
chr21	44768580	44802019	44768580	44802019	-	ENST00000345496.6@UBE2G2	ENST00000345496.6	protein_coding	44801706,44788060,44787920,44777299,44773547,44768580	44802019,44788095,44787965,44777417,44773687,44771489	Gene ID= ENSG00000184787.18 TPM= 61.1 Transcript Type= protein_coding
chr21	44769040	44801831	44769040	44801831	-	transcript1462.chr21.nic@UBE2G2	transcript1462.chr21.nic	protein_coding	44801706,44788060,44787920,44773547,44769040	44801831,44788095,44787965,44777417,44771489	Gene ID= ENSG00000184787.18 TPM= 7.39 Transcript Type= NA
chr21	44805617	44818129	44805617	44818129	-	ENST00000332859.10@SUMO3	ENST00000332859.10	protein_coding	44817948,44813976,44809047,44805617	44818129,44814104,44809118,44807040	Gene ID= ENSG00000184900.15 TPM= 98.08 Transcript Type= protein_coding
chr21	44849585	44873837	44849585	44873837	-	ENST00000330938.7@PTTG1IP	ENST00000330938.7	protein_coding	44873502,44865395,44861163,44856193,44855210,44849585	44873837,44865447,44861271,44856364,44855256,44851627	Gene ID= ENSG00000183255.11 TPM= 842.03 Transcript Type= protein_coding
chr21	44849586	44873903	44849586	44873903	-	ENST00000445724.3@PTTG1IP	ENST00000445724.3	protein_coding	44873502,44865395,44849586	44873903,44865447,44851627	Gene ID= ENSG00000183255.11 TPM= 19.27 Transcript Type= protein_coding
chr21	44849585	44873709	44849585	44873709	-	ENST00000397887.7@PTTG1IP	ENST00000397887.7	protein_coding	44873502,44865395,44861163,44849585	44873709,44865447,44861271,44851627	Gene ID= ENSG00000183255.11 TPM= 19.27 Transcript Type= protein_coding
chr21	44885953	44911460	44885953	44911460	-	ENST00000397857.5@ITGB2	ENST00000397857.5	protein_coding	44911376,44910725,44910284,44906915,44903365,44901492,44900320,44899067,44894971,44893404,44891809,44889978,44889276,44888693,44886736,44885953	44911460,44910785,44910372,44907095,44903535,44901733,44900475,44899162,44895060,44893544,44891996,44890222,44889495,44888895,44886902,44886430	Gene ID= ENSG00000160255.17 TPM= 166 Transcript Type= protein_coding
chr21	44885953	44928873	44885953	44928873	-	ENST00000397850.6@ITGB2	ENST00000397850.6	protein_coding	44928654,44920821,44910725,44910284,44906915,44903365,44901492,44900320,44899067,44894971,44893404,44891809,44889978,44889276,44888693,44886736,44885953	44928873,44921050,44910785,44910372,44907095,44903535,44901733,44900475,44899162,44895060,44893544,44891996,44890222,44889495,44888895,44886902,44886430	Gene ID= ENSG00000160255.17 TPM= 459.06 Transcript Type= protein_coding
chr21	44940012	44976989	44940012	44976989	+	ENST00000397826.7@FAM207A	ENST00000397826.7	protein_coding	44940012,44943684,44960100,44967034,44973197,44976680	44940186,44943792,44960168,44967181,44973265,44976989	Gene ID= ENSG00000160256.12 TPM= 4.09 Transcript Type= protein_coding
chr21	44940010	44976989	44940010	44976989	+	ENST00000291634.10@FAM207A	ENST00000291634.10	protein_coding	44940010,44943684,44960100,44967034,44973197,44976680	44940186,44943837,44960168,44967181,44973265,44976989	Gene ID= ENSG00000160256.12 TPM= 4.09 Transcript Type= protein_coding
chr21	44940011	44976972	44940011	44976972	+	transcript1507.chr21.nnic@FAM207A	transcript1507.chr21.nnic	protein_coding	44940011,44943684,44960100,44967034,44976680	44940186,44943792,44960168,44967181,44976972	Gene ID= ENSG00000160256.12 TPM= 2.34 Transcript Type= NA
chr21	44940674	44943440	44940674	44943440	-	transcript1509.chr21.nnic@NA	transcript1509.chr21.nnic	NA	44940674	44943440	Gene ID= novel_gene_chr21_1510 TPM= 4.67 Transcript Type= NA
chr21	45074553	45226560	45074553	45226560	+	transcript1521.chr21.nic@ADARB1	transcript1521.chr21.nic	protein_coding	45074553,45128402,45134715,45171610,45175730,45180330,45182585,45183362,45184474,45184923,45204555,45220836,45222018,45225547	45074793,45128573,45134832,45171684,45176664,45180444,45182753,45183510,45184593,45185091,45204736,45221014,45222107,45226560	Gene ID= ENSG00000197381.15 TPM= 7.79 Transcript Type= NA
chr21	45074553	45222579	45074553	45222579	+	transcript1529.chr21.nnic@ADARB1	transcript1529.chr21.nnic	protein_coding	45074553,45128402,45134715,45171610,45175730,45180330,45182585,45183362,45184923,45204555,45205660,45220836,45222018	45074793,45128573,45134832,45171684,45176664,45180444,45182753,45183510,45185091,45204736,45205752,45221014,45222579	Gene ID= ENSG00000197381.15 TPM= 3.5 Transcript Type= NA
chr21	45074553	45226560	45074553	45226560	+	transcript1530.chr21.nic@ADARB1	transcript1530.chr21.nic	protein_coding	45074553,45128402,45134715,45171610,45175730,45180330,45182585,45183362,45184923,45204555,45220836,45222018,45225547	45074793,45128573,45134832,45171684,45176664,45180444,45182753,45183510,45185091,45204736,45221014,45222107,45226560	Gene ID= ENSG00000197381.15 TPM= 7.2 Transcript Type= NA
chr21	45074609	45226560	45074609	45226560	+	transcript1532.chr21.nnic@ADARB1	transcript1532.chr21.nnic	protein_coding	45074609,45128402,45160101,45171610,45175730,45180330,45182585,45183362,45184923,45204555,45220836,45222018,45225547	45074793,45128573,45160223,45171684,45176664,45180444,45182753,45183510,45185091,45204736,45221014,45222107,45226560	Gene ID= ENSG00000197381.15 TPM= 4.29 Transcript Type= NA
chr21	45074609	45224246	45074609	45224246	+	transcript1541.chr21.nic@ADARB1	transcript1541.chr21.nic	protein_coding	45074609,45128402,45171610,45175730,45180330,45182585,45183362,45184474,45184923,45204555,45220836,45222018	45074793,45128573,45171684,45176664,45180444,45182753,45183510,45184593,45185091,45204736,45221014,45224246	Gene ID= ENSG00000197381.15 TPM= 5.84 Transcript Type= NA
chr21	45074553	45226560	45074553	45226560	+	transcript1542.chr21.nic@ADARB1	transcript1542.chr21.nic	protein_coding	45074553,45128402,45171610,45175730,45180330,45182585,45183362,45184923,45204555,45220836,45222018,45225547	45074793,45128573,45171684,45176664,45180444,45182753,45183510,45185091,45204736,45221014,45222107,45226560	Gene ID= ENSG00000197381.15 TPM= 6.62 Transcript Type= NA
chr21	45074571	45226560	45074571	45226560	+	transcript1544.chr21.nnic@ADARB1	transcript1544.chr21.nnic	protein_coding	45074571,45171610,45175730,45180330,45182585,45183362,45184474,45184923,45204555,45220836,45222018,45225547	45074793,45171684,45176664,45180444,45182753,45183510,45184593,45185091,45204736,45221014,45222107,45226560	Gene ID= ENSG00000197381.15 TPM= 3.12 Transcript Type= NA
chr21	45074600	45226560	45074600	45226560	+	ENST00000389863.8@ADARB1	ENST00000389863.8	protein_coding	45074600,45128402,45171610,45175730,45180330,45182585,45183362,45184474,45184923,45204555,45220836,45222018,45225547	45074793,45128573,45171684,45176664,45180444,45182753,45183510,45184593,45185091,45204736,45221014,45222107,45226560	Gene ID= ENSG00000197381.15 TPM= 7.79 Transcript Type= protein_coding
chr21	45263928	45287898	45263928	45287898	-	ENST00000334538.13@POFUT2	ENST00000334538.13	protein_coding	45287741,45285678,45283383,45282349,45278103,45277017,45269839,45267590,45266022,45263928	45287898,45285928,45283527,45282459,45278169,45277142,45270019,45267713,45266227,45265635	Gene ID= ENSG00000186866.16 TPM= 3.12 Transcript Type= nonsense_mediated_decay
chr21	45263928	45287895	45263928	45287895	-	transcript1570.chr21.nic@POFUT2	transcript1570.chr21.nic	protein_coding	45287741,45285678,45283383,45282349,45277017,45269839,45267590,45266022,45263928	45287895,45285928,45283527,45282459,45278169,45270019,45267713,45266227,45265635	Gene ID= ENSG00000186866.16 TPM= 3.12 Transcript Type= NA
chr21	45263928	45287898	45263928	45287898	-	ENST00000349485.9@POFUT2	ENST00000349485.9	protein_coding	45287741,45285678,45283383,45282349,45278103,45277017,45269839,45267590,45263928	45287898,45285928,45283527,45282459,45278169,45277142,45270019,45267713,45265635	Gene ID= ENSG00000186866.16 TPM= 28.8 Transcript Type= protein_coding
chr21	45292682	45297353	45292682	45297353	+	transcript1579.chr21.nnic@NA	transcript1579.chr21.nnic	NA	45292682	45297353	Gene ID= novel_gene_chr21_1580 TPM= 3.5 Transcript Type= NA
chr21	45405120	45512567	45405120	45512567	+	transcript1595.chr21.nnic@COL18A1	transcript1595.chr21.nnic	protein_coding	45405120,45405379,45468242,45476351,45477411,45477750,45478327,45479902,45480070,45480467,45480700,45481963,45482795,45486861,45487447,45488418,45489486,45490275,45490836,45491225,45492535,45492687,45493163,45493501,45494545,45494862,45495358,45496500,45497050,45497599,45504011,45504416,45505134,45505358,45505838,45507561,45509356,45510064,45511111,45512188	45405241,45405473,45468416,45476480,45477487,45477965,45478353,45479964,45480156,45480520,45480858,45482025,45482821,45486992,45487509,45488444,45489521,45490346,45490871,45491314,45492564,45492713,45493225,45493575,45494571,45494915,45495432,45496568,45497092,45497661,45504054,45504556,45505278,45505431,45505966,45507593,45509601,45510261,45511226,45512567	Gene ID= ENSG00000182871.14 TPM= 15.76 Transcript Type= NA
chr21	45405137	45513720	45405137	45513720	+	ENST00000400337.6@COL18A1	ENST00000400337.6	protein_coding	45405137,45405379,45468242,45473895,45475476,45476351,45477411,45477750,45478327,45479902,45480070,45480467,45480700,45481963,45482795,45486861,45487447,45488418,45489486,45490275,45490836,45491225,45492535,45492687,45493163,45493501,45494545,45494862,45495358,45496500,45497050,45497599,45504011,45504416,45505134,45505358,45505838,45507561,45509356,45510064,45511111,45512188	45405241,45405473,45468786,45473981,45475535,45476480,45477487,45477965,45478353,45479964,45480156,45480520,45480858,45482025,45482821,45486992,45487509,45488444,45489521,45490346,45490871,45491314,45492564,45492713,45493225,45493575,45494571,45494915,45495432,45496568,45497092,45497661,45504054,45504556,45505278,45505431,45505966,45507593,45509601,45510261,45511226,45513720	Gene ID= ENSG00000182871.14 TPM= 120.26 Transcript Type= protein_coding
chr21	45514715	45563085	45514715	45563085	-	transcript1612.chr21.nnic@SLC19A1	transcript1612.chr21.nnic	protein_coding	45562742,45537771,45531389,45530770,45525817,45515649,45514715	45563085,45538008,45532148,45530971,45525958,45516140,45515586	Gene ID= ENSG00000173638.18 TPM= 4.96 Transcript Type= NA
chr21	45514715	45563131	45514715	45563131	-	transcript1621.chr21.nnic@SLC19A1	transcript1621.chr21.nnic	protein_coding	45562742,45537771,45531389,45530770,45525817,45514715	45563131,45538008,45532148,45530971,45525958,45516140	Gene ID= ENSG00000173638.18 TPM= 4.96 Transcript Type= NA
chr21	45502513	45504121	45502513	45504121	-	ENST00000461785.1@SLC19A1	ENST00000461785.1	protein_coding	45503933,45502513	45504121,45502969	Gene ID= ENSG00000173638.18 TPM= 1.17 Transcript Type= processed_transcript
chr21	45513776	45542471	45513776	45542471	-	ENST00000311124.8@SLC19A1	ENST00000311124.8	protein_coding	45542368,45537771,45531389,45530770,45525817,45513776	45542471,45538008,45532148,45530971,45525958,45516140	Gene ID= ENSG00000173638.18 TPM= 20.14 Transcript Type= protein_coding
chr21	45514715	45542471	45514715	45542471	-	ENST00000380010.8@SLC19A1	ENST00000380010.8	protein_coding	45542368,45537771,45531389,45530770,45525817,45514715	45542471,45538008,45532148,45530971,45525958,45515152	Gene ID= ENSG00000173638.18 TPM= 2.63 Transcript Type= protein_coding
chr21	45555499	45556576	45555499	45556576	+	transcript1634.chr21.nnic@NA	transcript1634.chr21.nnic	NA	45555499	45556576	Gene ID= novel_gene_chr21_1635 TPM= 2.34 Transcript Type= NA
chr21	45558462	45562146	45558462	45562146	+	transcript1632.chr21.nnic@NA	transcript1632.chr21.nnic	NA	45558462	45562146	Gene ID= novel_gene_chr21_1633 TPM= 15.18 Transcript Type= NA
chr21	45981737	46005050	45981737	46005050	+	ENST00000361866.7@COL6A1	ENST00000361866.7	protein_coding	45981737,45982634,45984269,45986526,45986944,45987155,45987499,45987610,45989084,45989608,45989752,45990258,45990378,45990773,45990979,45992010,45992164,45992363,45992748,45994167,45997421,45997700,45998121,45998398,45998897,45999153,45999657,46000331,46000759,46001253,46001961,46002218,46002527,46003120,46003391	45981947,45982763,45984469,45986685,45987072,45987175,45987519,45987654,45989137,45989652,45989778,45990284,45990422,45990826,45991041,45992072,45992217,45992398,45992810,45994229,45997483,45997762,45998171,45998433,45998959,45999218,45999692,46000367,46000767,46001386,46002070,46002401,46002710,46003149,46005050	Gene ID= ENSG00000142156.14 TPM= 723.91 Transcript Type= protein_coding
chr21	45981769	46004101	45981769	46004101	+	ENST00000612273.1@COL6A1	ENST00000612273.1	protein_coding	45981769,45982634,45984269,45986526,45986944,45987155,45987499,45987610,45989084,45989608,45989752,45990258,45990378,45990773,45990979,45992010,45992164,45992363,45992748,45994167,45997421,45997700,45998121,45998398,45998897,45999153,45999657,46000331,46001253,46001961,46002218,46002527,46003120,46003391	45981947,45982763,45984469,45986685,45987072,45987175,45987519,45987654,45989137,45989652,45989778,45990284,45990422,45990826,45991041,45992072,45992217,45992398,45992810,45994229,45997483,45997762,45998171,45998433,45998959,45999218,45999692,46000370,46001386,46002070,46002401,46002710,46003149,46004101	Gene ID= ENSG00000142156.14 TPM= 193.24 Transcript Type= protein_coding
chr21	46098105	46132848	46098105	46132848	+	transcript1680.chr21.nic@COL6A2	transcript1680.chr21.nic	protein_coding	46098105,46111450,46111979,46112804,46114008,46115872,46116009,46116377,46116651,46116770,46117400,46117874,46118614,46119030,46119788,46120515,46121061,46121556,46122108,46122496,46122875,46124651,46124885,46125266,46125465,46125785,46126503,46129196	46098173,46111591,46112577,46112824,46114073,46115925,46116053,46116403,46116677,46116814,46117453,46117936,46118676,46119119,46119850,46120577,46121123,46121618,46122158,46122531,46122937,46124713,46124920,46125311,46125617,46126237,46126541,46132848	Gene ID= ENSG00000142173.14 TPM= 98.22 Transcript Type= NA
chr21	46098097	46132849	46098097	46132849	+	ENST00000300527.8@COL6A2	ENST00000300527.8	protein_coding	46098097,46111450,46111979,46112804,46114008,46115872,46116009,46116377,46116651,46116770,46117400,46117874,46118614,46119030,46119788,46120515,46121061,46121556,46122108,46122496,46122875,46124651,46124885,46125266,46125465,46125785,46126503,46131954	46098173,46111591,46112577,46112824,46114073,46115925,46116053,46116403,46116677,46116814,46117453,46117936,46118676,46119119,46119850,46120577,46121123,46121618,46122158,46122531,46122937,46124713,46124920,46125311,46125617,46126237,46126541,46132849	Gene ID= ENSG00000142173.14 TPM= 898.02 Transcript Type= protein_coding
chr21	46098119	46129805	46098119	46129805	+	ENST00000310645.9@COL6A2	ENST00000310645.9	protein_coding	46098119,46111450,46111979,46112804,46114008,46115872,46116009,46116377,46116651,46116770,46117400,46117874,46118614,46119030,46119788,46120515,46121061,46121556,46122108,46122496,46122875,46124651,46124885,46125266,46125465,46125785,46126503,46128903	46098173,46111591,46112577,46112824,46114073,46115925,46116053,46116403,46116677,46116814,46117453,46117936,46118676,46119119,46119850,46120577,46121123,46121618,46122158,46122531,46122937,46124713,46124920,46125311,46125617,46126237,46126541,46129805	Gene ID= ENSG00000142173.14 TPM= 8.78 Transcript Type= protein_coding
chr21	46111450	46129808	46111450	46129808	+	ENST00000397763.5@COL6A2	ENST00000397763.5	protein_coding	46111450,46111979,46112804,46114008,46115872,46116009,46116377,46116651,46116770,46117400,46117874,46118614,46119030,46119788,46120515,46121061,46121556,46122108,46122496,46122875,46124651,46124885,46125266,46125465,46125785,46126503,46129196	46111591,46112577,46112824,46114073,46115925,46116053,46116403,46116677,46116814,46117453,46117936,46118676,46119119,46119850,46120577,46121123,46121618,46122158,46122531,46122937,46124713,46124920,46125311,46125617,46126237,46126541,46129808	Gene ID= ENSG00000142173.14 TPM= 150.12 Transcript Type= protein_coding
chr21	46161148	46184476	46161148	46184476	-	ENST00000330205.10@SPATC1L	ENST00000330205.10	protein_coding	46184356,46168308,46161916,46161148	46184476,46168658,46162067,46161705	Gene ID= ENSG00000160284.14 TPM= 15.18 Transcript Type= protein_coding
chr21	46188446	46228827	46188446	46228827	-	transcript1714.chr21.nic@LSS	transcript1714.chr21.nic	protein_coding	46228732,46228434,46227552,46222630,46221854,46219476,46216389,46215685,46215180,46213738,46213025,46210688,46209554,46208251,46207428,46206672,46205836,46196202,46195676,46194491,46191881,46191076,46188446	46228827,46228599,46227690,46222738,46221975,46219572,46216524,46215793,46215298,46213835,46213052,46210744,46209625,46208301,46207577,46206768,46205941,46196267,46195756,46194661,46191959,46191235,46188821	Gene ID= ENSG00000160285.14 TPM= 6.23 Transcript Type= NA
chr21	46189125	46228784	46189125	46228784	-	transcript1720.chr21.nic@LSS	transcript1720.chr21.nic	protein_coding	46228685,46228434,46227552,46222630,46221854,46219476,46216389,46215685,46215180,46213738,46213025,46210688,46209554,46208251,46207428,46206672,46205836,46196202,46195676,46194491,46191881,46189125	46228784,46228599,46227690,46222738,46221975,46219572,46216524,46215793,46215298,46213835,46213052,46210744,46209625,46208301,46207577,46206768,46205941,46196267,46195756,46194661,46191959,46191235	Gene ID= ENSG00000160285.14 TPM= 71.62 Transcript Type= NA
chr21	46188446	46228824	46188446	46228824	-	ENST00000397728.7@LSS	ENST00000397728.7	protein_coding	46228732,46228434,46227552,46222630,46221854,46219476,46216389,46215685,46215180,46213738,46213025,46210688,46209554,46208251,46207428,46206672,46205836,46196202,46195676,46194491,46191881,46188446	46228824,46228599,46227690,46222738,46221975,46219572,46216524,46215793,46215298,46213835,46213052,46210744,46209625,46208301,46207577,46206768,46205941,46196267,46195756,46194661,46191959,46191235	Gene ID= ENSG00000160285.14 TPM= 45.93 Transcript Type= protein_coding
chr21	46189124	46228824	46189124	46228824	-	ENST00000457828.6@LSS	ENST00000457828.6	protein_coding	46228434,46227552,46222630,46221854,46219476,46216389,46215685,46215180,46213738,46213025,46210688,46209554,46208251,46207428,46206672,46205836,46196202,46195676,46194491,46191881,46189124	46228824,46227690,46222738,46221975,46219572,46216524,46215793,46215298,46213835,46213052,46210744,46209625,46208301,46207577,46206768,46205941,46196267,46195756,46194661,46191959,46191235	Gene ID= ENSG00000160285.14 TPM= 22.58 Transcript Type= protein_coding
chr21	46229234	46242999	46229234	46242999	+	ENST00000432735.5@MCM3AP-AS1	ENST00000432735.5	antisense_RNA	46229234,46236224,46240834	46229266,46236326,46242999	Gene ID= ENSG00000215424.9 TPM= 2.34 Transcript Type= antisense_RNA
chr21	46233046	46234914	46233046	46234914	-	transcript1760.chr21.nnic@NA	transcript1760.chr21.nnic	NA	46233046	46234914	Gene ID= novel_gene_chr21_1761 TPM= 3.5 Transcript Type= NA
chr21	46235133	46286291	46235133	46286291	-	transcript1741.chr21.nnic@MCM3AP	transcript1741.chr21.nnic	protein_coding	46285699,46284068,46283615,46280497,46279993,46277527,46275186,46273388,46272561,46270401,46266982,46265925,46265321,46264117,46261280,46260793,46258939,46256789,46254776,46254392,46251529,46246628,46246307,46244807,46243465,46242802,46240811,46236829,46235133	46286291,46285394,46283838,46280575,46280137,46277717,46275325,46273585,46272829,46270563,46267142,46266010,46265523,46264217,46261411,46260906,46259091,46256986,46254844,46254526,46251682,46246886,46246404,46245197,46243722,46242931,46241017,46236979,46235426	Gene ID= ENSG00000160294.10 TPM= 13.23 Transcript Type= NA
chr21	46235133	46286291	46235133	46286291	-	transcript1742.chr21.nic@MCM3AP	transcript1742.chr21.nic	protein_coding	46285699,46284068,46283615,46280497,46279993,46277527,46275186,46273388,46272561,46270401,46266982,46265925,46265321,46264117,46261280,46260793,46258939,46256789,46254776,46254392,46251529,46246628,46246307,46244807,46243465,46242802,46240811,46236829,46235133	46286291,46285394,46283838,46280575,46280137,46277717,46275325,46273585,46272829,46270563,46267142,46266166,46265523,46264217,46261411,46260906,46259091,46256986,46254844,46254526,46251682,46246886,46246404,46245197,46243722,46242931,46241017,46236979,46235426	Gene ID= ENSG00000160294.10 TPM= 30.16 Transcript Type= NA
chr21	46235133	46286266	46235133	46286266	-	transcript1743.chr21.nic@MCM3AP	transcript1743.chr21.nic	protein_coding	46285803,46284068,46283615,46280497,46279993,46277527,46275186,46273388,46272561,46270401,46266982,46265925,46265321,46264117,46261280,46260793,46258939,46256789,46254776,46254392,46251529,46246628,46246307,46244807,46243465,46242802,46240811,46236829,46235133	46286266,46285394,46283838,46280575,46280137,46277717,46275325,46273585,46272829,46270563,46267142,46266166,46265523,46264217,46261411,46260906,46259091,46256986,46254844,46254526,46251682,46246886,46246404,46245197,46243722,46242931,46241017,46236979,46235426	Gene ID= ENSG00000160294.10 TPM= 25.49 Transcript Type= NA
chr21	46286384	46297751	46286384	46297751	+	ENST00000329319.7@YBEY	ENST00000329319.7	protein_coding	46286384,46286870,46291334,46296162,46297539	46286737,46287123,46291462,46296230,46297751	Gene ID= ENSG00000182362.13 TPM= 2.34 Transcript Type= protein_coding
chr21	46286337	46297751	46286337	46297751	+	ENST00000397701.8@YBEY	ENST00000397701.8	protein_coding	46286337,46286870,46291334,46296162,46297539	46286415,46287123,46291462,46296230,46297751	Gene ID= ENSG00000182362.13 TPM= 4.67 Transcript Type= protein_coding
chr21	46286355	46291930	46286355	46291930	+	ENST00000468924.5@YBEY	ENST00000468924.5	protein_coding	46286355,46286870,46291334	46286415,46287123,46291930	Gene ID= ENSG00000182362.13 TPM= 1.17 Transcript Type= retained_intron
chr21	46426070	46445769	46426070	46445769	+	transcript1764.chr21.nic@PCNT	transcript1764.chr21.nic	protein_coding	46426070,46428395,46430010,46430507,46431529,46435904,46436979,46438164,46440083,46440855,46442497,46443810,46444694,46445284	46427795,46428590,46430232,46430657,46432215,46436148,46437081,46438337,46440202,46441084,46442573,46443948,46444821,46445769	Gene ID= ENSG00000160299.16 TPM= 4.09 Transcript Type= NA
chr21	46324122	46445769	46324122	46445769	+	ENST00000359568.9@PCNT	ENST00000359568.9	protein_coding	46324122,46326377,46334397,46346128,46346743,46347457,46349012,46349684,46351429,46353104,46353987,46355452,46356974,46363480,46366584,46381694,46385832,46388742,46389199,46390670,46391164,46397265,46398014,46398235,46399590,46401551,46402331,46411189,46412837,46416069,46418204,46421970,46425831,46427622,46428395,46430010,46430507,46431529,46435904,46436979,46438164,46440083,46440855,46442497,46443810,46444694,46445284	46324282,46326589,46334768,46346208,46346998,46347512,46349186,46349820,46351540,46353326,46354068,46355626,46357191,46363934,46367139,46381840,46385983,46388884,46389431,46390832,46391376,46397494,46398130,46398255,46399796,46401721,46402483,46412067,46412992,46416839,46418306,46422124,46425971,46427795,46428590,46430232,46430657,46432215,46436148,46437081,46438337,46440202,46441084,46442573,46443948,46444821,46445769	Gene ID= ENSG00000160299.16 TPM= 9.92 Transcript Type= protein_coding
chr21	46324141	46349800	46324141	46349800	+	ENST00000490468.5@PCNT	ENST00000490468.5	protein_coding	46324141,46326377,46334397,46346128,46346723,46347457,46349012,46349684	46324282,46326589,46334768,46346208,46346981,46347512,46349186,46349800	Gene ID= ENSG00000160299.16 TPM= 1.17 Transcript Type= processed_transcript
chr21	46598962	46605208	46598962	46605208	-	ENST00000291700.8@S100B	ENST00000291700.8	protein_coding	46605013,46602278,46598962	46605208,46602416,46599503	Gene ID= ENSG00000160307.9 TPM= 7.01 Transcript Type= protein_coding
chr21	46635167	46664951	46635167	46664951	+	ENST00000355680.7@PRMT2	ENST00000355680.7	protein_coding	46635167,46636439,46636896,46643535,46644306,46648458,46649575,46658745,46660833,46661800,46663383,46664295	46635763,46636547,46636990,46643639,46644488,46648619,46649739,46658920,46660962,46661936,46663554,46664951	Gene ID= ENSG00000160310.17 TPM= 52.74 Transcript Type= protein_coding
chr21	46635615	46664951	46635615	46664951	+	ENST00000397638.6@PRMT2	ENST00000397638.6	protein_coding	46635615,46636896,46643535,46644306,46648458,46649575,46658745,46660833,46661800,46663383,46664295	46635763,46636990,46643639,46644488,46648619,46649739,46658920,46660962,46661936,46663554,46664951	Gene ID= ENSG00000160310.17 TPM= 67.34 Transcript Type= protein_coding
chr21	46635650	46664951	46635650	46664951	+	ENST00000397637.5@PRMT2	ENST00000397637.5	protein_coding	46635650,46636896,46643535,46644306,46648458,46649575,46658745,46660833,46661800,46663383,46664295	46636547,46636990,46643639,46644488,46648619,46649739,46658920,46660962,46661936,46663554,46664951	Gene ID= ENSG00000160310.17 TPM= 11.87 Transcript Type= protein_coding
chr21	46635611	46661270	46635611	46661270	+	transcript1796.chr21.nic@PRMT2	transcript1796.chr21.nic	protein_coding	46635611,46636439,46636896,46643535,46644306,46648458,46649575,46658745,46660833	46635763,46636547,46636990,46643639,46644488,46648619,46649739,46658920,46661270	Gene ID= ENSG00000160310.17 TPM= 8.17 Transcript Type= NA
chr21	46635611	46661270	46635611	46661270	+	transcript1803.chr21.nic@PRMT2	transcript1803.chr21.nic	protein_coding	46635611,46636439,46636896,46643535,46644306,46648458,46649575,46658745	46635763,46636547,46636990,46643639,46644488,46648619,46649739,46661270	Gene ID= ENSG00000160310.17 TPM= 15.76 Transcript Type= NA
chr21	46635595	46665117	46635595	46665117	+	ENST00000451211.6@PRMT2	ENST00000451211.6	protein_coding	46635595,46636896,46643535,46644306,46648458,46649575,46658745,46664295	46635763,46636990,46643639,46644488,46648619,46649739,46658920,46665117	Gene ID= ENSG00000160310.17 TPM= 2.34 Transcript Type= protein_coding
chr21	46635595	46665117	46635595	46665117	+	ENST00000458387.6@PRMT2	ENST00000458387.6	protein_coding	46635595,46636896,46643535,46644306,46648458,46649575,46663383,46664295	46635763,46636990,46643639,46644488,46648619,46649739,46663554,46665117	Gene ID= ENSG00000160310.17 TPM= 2.34 Transcript Type= protein_coding
chr21	46635616	46661270	46635616	46661270	+	transcript1814.chr21.nic@PRMT2	transcript1814.chr21.nic	protein_coding	46635616,46636896,46643535,46644306,46648458,46649575,46658745	46635763,46636990,46643639,46644488,46648619,46649739,46661270	Gene ID= ENSG00000160310.17 TPM= 16.93 Transcript Type= NA
chr21	46635674	46649893	46635674	46649893	+	ENST00000397628.5@PRMT2	ENST00000397628.5	protein_coding	46635674,46636896,46643535,46644306,46648458,46649575	46635763,46636990,46643639,46644488,46648619,46649893	Gene ID= ENSG00000160310.17 TPM= 22.18 Transcript Type= protein_coding
chr21	46654573	46657388	46654573	46657388	+	transcript1824.chr21.nnic@NA	transcript1824.chr21.nnic	NA	46654573	46657388	Gene ID= novel_gene_chr21_1825 TPM= 2.34 Transcript Type= NA
chr22	11859803	11910862	11859803	11910862	+	transcript1.chr22.nnic@NA	transcript1.chr22.nnic	NA	11859803,11867115,11869829,11873844,11876104,11876224,11882268,11886401,11887952,11889310,11891782,11902861,11903787,11905337,11910166	11859927,11867145,11869898,11873925,11876132,11876296,11882338,11886565,11888146,11890230,11891931,11903142,11904000,11905557,11910862	Gene ID= novel_gene_chr22_2 TPM= 2.34 Transcript Type= NA
chr22	17084947	17109980	17084947	17109980	+	transcript28.chr22.nic@IL17RA	transcript28.chr22.nic	protein_coding	17084947,17097062,17097797,17098775,17100355,17101996,17103494,17104726,17105591,17105853,17107727,17108307	17085229,17097086,17097943,17098887,17100481,17102302,17103577,17104810,17105602,17105954,17107768,17109980	Gene ID= ENSG00000177663.13 TPM= 9.34 Transcript Type= NA
chr22	17137522	17159297	17137522	17159297	-	transcript37.chr22.nnic@HDHD5	transcript37.chr22.nnic	protein_coding	17159126,17149542,17148448,17145024,17143098,17141393,17141059,17138550,17137522	17159297,17149745,17148560,17145117,17143131,17142208,17141233,17138738,17138357	Gene ID= ENSG00000069998.12 TPM= 2.8 Transcript Type= NA
chr22	17137522	17159248	17137522	17159248	-	transcript41.chr22.nic@HDHD5	transcript41.chr22.nic	protein_coding	17158457,17149542,17148448,17145024,17143098,17141059,17138550,17137522	17159248,17149745,17148560,17145117,17143131,17141233,17138738,17138357	Gene ID= ENSG00000069998.12 TPM= 11.94 Transcript Type= NA
chr22	17137522	17159297	17137522	17159297	-	transcript48.chr22.nnic@HDHD5	transcript48.chr22.nnic	protein_coding	17159126,17149542,17148448,17145024,17143098,17141059,17138550,17137522	17159297,17149745,17148560,17145117,17143131,17142208,17138738,17138357	Gene ID= ENSG00000069998.12 TPM= 5.14 Transcript Type= NA
chr22	17137522	17159257	17137522	17159257	-	transcript49.chr22.nnic@HDHD5	transcript49.chr22.nnic	protein_coding	17159126,17148448,17145024,17143098,17141059,17138550,17137522	17159257,17148560,17145117,17143131,17141233,17138738,17138357	Gene ID= ENSG00000069998.12 TPM= 5.14 Transcript Type= NA
chr22	17137522	17159297	17137522	17159297	-	transcript51.chr22.nnic@HDHD5	transcript51.chr22.nnic	protein_coding	17159126,17149542,17148448,17145024,17143098,17138550,17137522	17159297,17149745,17148560,17145117,17143131,17138738,17138357	Gene ID= ENSG00000069998.12 TPM= 4.75 Transcript Type= NA
chr22	17137520	17159277	17137520	17159277	-	ENST00000336737.8@HDHD5	ENST00000336737.8	protein_coding	17159126,17149542,17148448,17145024,17143098,17141059,17138550,17137520	17159277,17149745,17148560,17145117,17143131,17141233,17138738,17138357	Gene ID= ENSG00000069998.12 TPM= 64.8 Transcript Type= protein_coding
chr22	17179306	17199783	17179306	17199783	-	ENST00000330232.8@ADA2	ENST00000330232.8	protein_coding	17199549,17191683,17189942,17188339,17182604,17181820,17179306	17199783,17191810,17190032,17188447,17182761,17182022,17181576	Gene ID= ENSG00000093072.15 TPM= 23.35 Transcript Type= protein_coding
chr22	17563439	17590994	17563439	17590994	+	ENST00000327451.10@SLC25A18	ENST00000327451.10	protein_coding	17563439,17569924,17579745,17581037,17581358,17582563,17583416,17587136,17587925,17589590,17590095	17563713,17569986,17579964,17581159,17581413,17582653,17583534,17587301,17588079,17589665,17590994	Gene ID= ENSG00000182902.13 TPM= 1.17 Transcript Type= protein_coding
chr22	17592136	17628818	17592136	17628818	-	ENST00000253413.9@ATP6V1E1	ENST00000253413.9	protein_coding	17628603,17619461,17613211,17612812,17601092,17600027,17598194,17594529,17592136	17628818,17619526,17613320,17612878,17601181,17600095,17598288,17594616,17592736	Gene ID= ENSG00000131100.12 TPM= 71.81 Transcript Type= protein_coding
chr22	17592169	17628747	17592169	17628747	-	ENST00000399796.6@ATP6V1E1	ENST00000399796.6	protein_coding	17628603,17619461,17613211,17612812,17600027,17598194,17594529,17592169	17628747,17619526,17613320,17612878,17600095,17598288,17594616,17592736	Gene ID= ENSG00000131100.12 TPM= 18.1 Transcript Type= protein_coding
chr22	17638740	17729215	17638740	17729215	+	transcript64.chr22.nnic@BCL2L13	transcript64.chr22.nnic	protein_coding	17638740,17655662,17662899,17683214,17688986,17696141,17702243,17726677	17638886,17655832,17663013,17683321,17689142,17696210,17702386,17729215	Gene ID= ENSG00000099968.17 TPM= 6.22 Transcript Type= NA
chr22	17638747	17729140	17638747	17729140	+	transcript66.chr22.nnic@BCL2L13	transcript66.chr22.nnic	protein_coding	17638747,17638846,17655662,17683214,17688986,17696141,17702243,17726677	17638810,17638886,17655832,17683321,17689142,17696210,17702386,17729140	Gene ID= ENSG00000099968.17 TPM= 2.72 Transcript Type= NA
chr22	17638584	17730855	17638584	17730855	+	ENST00000618481.4@BCL2L13	ENST00000618481.4	protein_coding	17638584,17683214,17688986,17696141,17702243,17726677	17638886,17683321,17689142,17696210,17702386,17730855	Gene ID= ENSG00000099968.17 TPM= 1.17 Transcript Type= protein_coding
chr22	17638584	17730855	17638584	17730855	+	ENST00000611738.4@BCL2L13	ENST00000611738.4	protein_coding	17638584,17683214,17688986,17696141,17726677	17638886,17683321,17689142,17696210,17730855	Gene ID= ENSG00000099968.17 TPM= 1.17 Transcript Type= protein_coding
chr22	17638737	17729140	17638737	17729140	+	transcript86.chr22.nic@BCL2L13	transcript86.chr22.nic	protein_coding	17638737,17683214,17688986,17702243,17726677	17638886,17683321,17689142,17702386,17729140	Gene ID= ENSG00000099968.17 TPM= 2.72 Transcript Type= NA
chr22	17731202	17735219	17731202	17735219	+	transcript97.chr22.nnic@NA	transcript97.chr22.nnic	NA	17731202	17735219	Gene ID= novel_gene_chr22_98 TPM= 8.17 Transcript Type= NA
chr22	17734138	17774016	17734138	17774016	-	ENST00000317361.11@BID	ENST00000317361.11	protein_coding	17773610,17750105,17743803,17739349,17738017,17734138	17774016,17750174,17744013,17739488,17738229,17735591	Gene ID= ENSG00000015475.18 TPM= 1.17 Transcript Type= protein_coding
chr22	17734142	17774495	17734142	17774495	-	ENST00000399767.5@BID	ENST00000399767.5	protein_coding	17774381,17743803,17739349,17738017,17734142	17774495,17744013,17739488,17738229,17735591	Gene ID= ENSG00000015475.18 TPM= 1.17 Transcript Type= protein_coding
chr22	17734175	17774489	17734175	17774489	-	ENST00000399765.5@BID	ENST00000399765.5	protein_coding	17774381,17739349,17738017,17734175	17774489,17739488,17738229,17735591	Gene ID= ENSG00000015475.18 TPM= 1.17 Transcript Type= protein_coding
chr22	17787652	17818393	17787652	17818393	-	transcript99.chr22.nic@MICAL3	transcript99.chr22.nic	protein_coding	17817311,17816690,17812507,17810703,17808844,17803811,17791202,17790998,17787652	17818393,17816784,17812557,17810813,17808937,17803861,17791301,17791071,17790916	Gene ID= ENSG00000243156.7 TPM= 21.02 Transcript Type= NA
chr22	17787649	18024559	17787649	18024559	-	ENST00000441493.6@MICAL3	ENST00000441493.6	protein_coding	18024281,17906549,17904632,17902631,17901878,17900842,17899448,17896724,17896246,17895284,17893808,17891485,17889034,17887323,17887170,17885878,17871837,17865924,17864899,17841822,17831854,17827644,17822947,17822030,17821427,17817311,17816690,17810703,17808844,17791202,17790998,17787649	18024559,17906886,17904839,17902747,17901979,17900997,17899548,17896981,17896361,17895410,17893904,17891632,17889230,17887435,17887232,17886051,17872023,17866012,17864986,17842017,17832107,17827781,17823060,17822170,17821509,17819129,17816784,17810813,17808937,17791301,17791071,17790916	Gene ID= ENSG00000243156.7 TPM= 4.67 Transcript Type= protein_coding
chr22	18077186	18078884	18077186	18078884	-	ENST00000607927.1@AC016027.1	ENST00000607927.1	antisense_RNA	18077186	18078884	Gene ID= ENSG00000225335.3 TPM= 1.17 Transcript Type= antisense_RNA
chr22	18077923	18105396	18077923	18105396	+	ENST00000329627.11@PEX26	ENST00000329627.11	protein_coding	18077923,18078296,18079874,18083437,18085112,18087972	18078047,18078606,18080014,18083732,18085258,18105396	Gene ID= ENSG00000215193.12 TPM= 7.01 Transcript Type= protein_coding
chr22	18150169	18177397	18150169	18177397	+	transcript115.chr22.nnic@USP18	transcript115.chr22.nnic	protein_coding	18150169,18157558,18160172,18161790,18167255,18167890,18169844,18170753,18173150,18173793,18176772	18150222,18157859,18160268,18161935,18167334,18168036,18169939,18170920,18173281,18173842,18177397	Gene ID= ENSG00000184979.9 TPM= 4.67 Transcript Type= NA
chr22	18149899	18177397	18149899	18177397	+	ENST00000215794.7@USP18	ENST00000215794.7	protein_coding	18149899,18157558,18160172,18161790,18167255,18167890,18169844,18170753,18173150,18173793,18176772	18150222,18157820,18160268,18161935,18167334,18168036,18169939,18170920,18173281,18173842,18177397	Gene ID= ENSG00000184979.9 TPM= 30.36 Transcript Type= protein_coding
chr22	18516344	18518161	18516344	18518161	-	ENST00000619998.1@GGTLC3	ENST00000619998.1	protein_coding	18518063,18517722,18517362,18517147,18516952,18516344	18518161,18517931,18517489,18517259,18517065,18516647	Gene ID= ENSG00000274252.1 TPM= 9.92 Transcript Type= protein_coding
chr22	18516344	18518111	18516344	18518111	-	transcript141.chr22.nic@GGTLC3	transcript141.chr22.nic	protein_coding	18517722,18517362,18517147,18516952,18516344	18518111,18517489,18517259,18517065,18516647	Gene ID= ENSG00000274252.1 TPM= 9.92 Transcript Type= NA
chr22	18528760	18530571	18528760	18530571	+	transcript135.chr22.nic@TMEM191B	transcript135.chr22.nic	protein_coding	18528760,18529019,18529441,18529606,18529936,18530156	18528867,18529093,18529497,18529724,18530008,18530571	Gene ID= ENSG00000278558.4 TPM= 9.34 Transcript Type= NA
chr22	18533657	18577977	18533657	18577977	-	transcript119.chr22.nnic@PI4KAP1	transcript119.chr22.nnic	transcribed_unprocessed_pseudogene	18577773,18552473,18548670,18548318,18548011,18547246,18544652,18543667,18540573,18540402,18539228,18538640,18538433,18537292,18536640,18535859,18535245,18533657	18577977,18552573,18548827,18548469,18548118,18547373,18544781,18543737,18540645,18540472,18539337,18538744,18538558,18537412,18536808,18535948,18535328,18534053	Gene ID= ENSG00000274602.4 TPM= 5.69 Transcript Type= NA
chr22	18533657	18577977	18533657	18577977	-	transcript122.chr22.nnic@PI4KAP1	transcript122.chr22.nnic	transcribed_unprocessed_pseudogene	18577773,18552473,18548670,18548318,18548011,18547246,18544652,18543667,18540573,18540402,18539228,18538640,18538433,18536640,18535859,18535245,18533657	18577977,18552573,18548827,18548469,18548118,18547373,18544781,18543737,18540645,18540472,18539337,18538744,18538558,18537412,18535948,18535328,18534053	Gene ID= ENSG00000274602.4 TPM= 2.57 Transcript Type= NA
chr22	18533657	18537865	18533657	18537865	-	ENST00000619742.4@PI4KAP1	ENST00000619742.4	transcribed_unprocessed_pseudogene	18536650,18535859,18535245,18533657	18537865,18535948,18535328,18534053	Gene ID= ENSG00000274602.4 TPM= 5.84 Transcript Type= processed_transcript
chr22	18533671	18548828	18533671	18548828	-	ENST00000618794.4@PI4KAP1	ENST00000618794.4	transcribed_unprocessed_pseudogene	18548670,18548318,18548011,18547246,18544652,18543667,18540573,18540402,18539228,18538640,18538433,18536650,18535859,18535245,18533671	18548828,18548469,18548118,18547373,18544781,18543737,18540645,18540472,18539337,18538744,18538558,18537412,18535948,18535328,18534053	Gene ID= ENSG00000274602.4 TPM= 3.35 Transcript Type= processed_transcript
chr22	18538056	18577968	18538056	18577968	-	ENST00000611748.1@PI4KAP1	ENST00000611748.1	transcribed_unprocessed_pseudogene	18577773,18552473,18548670,18548318,18548011,18547246,18544652,18543667,18540573,18540402,18539228,18538640,18538056	18577968,18552573,18548827,18548469,18548118,18547373,18544781,18543737,18540645,18540472,18539337,18538744,18538558	Gene ID= ENSG00000274602.4 TPM= 8.02 Transcript Type= processed_transcript
chr22	18906223	18912088	18906223	18912088	+	ENST00000331444.10@DGCR6	ENST00000331444.10	protein_coding	18906223,18906565,18910172,18910888,18911540	18906484,18906725,18910272,18911028,18912088	Gene ID= ENSG00000183628.12 TPM= 42.42 Transcript Type= protein_coding
chr22	18906351	18912082	18906351	18912082	+	ENST00000427407.5@DGCR6	ENST00000427407.5	protein_coding	18906351,18906565,18909980,18910172,18910888,18911540	18906484,18906725,18910098,18910272,18911028,18912082	Gene ID= ENSG00000183628.12 TPM= 5.06 Transcript Type= nonsense_mediated_decay
chr22	18906325	18914238	18906325	18914238	+	ENST00000483718.5@DGCR6	ENST00000483718.5	protein_coding	18906325,18906565,18910172,18910888,18911540	18906467,18906725,18910272,18911028,18914238	Gene ID= ENSG00000183628.12 TPM= 1.55 Transcript Type= nonsense_mediated_decay
chr22	18912782	18936553	18912782	18936553	-	ENST00000357068.10@PRODH	ENST00000357068.10	protein_coding	18936015,18930990,18925688,18925051,18923115,18922817,18922325,18921342,18919706,18919451,18918316,18916890,18913438,18912782	18936553,18931198,18925722,18925200,18923179,18922933,18922404,18921423,18919798,18919597,18918491,18916988,18913526,18913362	Gene ID= ENSG00000100033.16 TPM= 174.19 Transcript Type= protein_coding
chr22	18912781	18936296	18912781	18936296	-	ENST00000420436.5@PRODH	ENST00000420436.5	protein_coding	18936170,18930990,18925688,18925051,18923115,18922817,18922325,18921342,18919706,18919451,18918316,18916890,18913438,18912781	18936296,18931181,18925722,18925200,18923179,18922933,18922404,18921423,18919798,18919597,18918491,18916988,18913526,18913362	Gene ID= ENSG00000100033.16 TPM= 10.47 Transcript Type= protein_coding
chr22	18912781	18936336	18912781	18936336	-	transcript181.chr22.nic@PRODH	transcript181.chr22.nic	protein_coding	18936015,18930990,18925688,18925051,18922817,18922325,18919706,18919451,18918316,18916890,18913438,18912781	18936336,18931198,18925722,18925200,18922933,18922404,18921423,18919597,18918491,18916988,18913526,18913362	Gene ID= ENSG00000100033.16 TPM= 10.2 Transcript Type= NA
chr22	19024857	19028712	19024857	19028712	+	transcript202.chr22.nnic@NA	transcript202.chr22.nnic	NA	19024857	19028712	Gene ID= novel_gene_chr22_203 TPM= 2.34 Transcript Type= NA
chr22	19028501	19031993	19028501	19031993	+	transcript204.chr22.nnic@NA	transcript204.chr22.nnic	NA	19028501	19031993	Gene ID= novel_gene_chr22_205 TPM= 11.68 Transcript Type= NA
chr22	19036286	19122454	19036286	19122454	-	transcript206.chr22.nnic@DGCR2	transcript206.chr22.nnic	protein_coding	19122128,19089368,19068100,19064848,19063202,19056986,19052481,19048440,19041807,19041058,19036286	19122454,19089490,19068225,19065067,19063278,19057162,19052605,19048643,19041959,19041294,19039121	Gene ID= ENSG00000070413.19 TPM= 37.3 Transcript Type= NA
chr22	19036286	19122454	19036286	19122454	-	ENST00000263196.11@DGCR2	ENST00000263196.11	protein_coding	19122128,19089368,19068100,19064848,19063202,19056986,19048440,19041807,19041058,19036286	19122454,19089490,19068225,19065067,19063278,19057162,19048643,19041959,19041294,19039121	Gene ID= ENSG00000070413.19 TPM= 205.64 Transcript Type= protein_coding
chr22	19036282	19122454	19036282	19122454	-	ENST00000537045.5@DGCR2	ENST00000537045.5	protein_coding	19122128,19068100,19064848,19063202,19056986,19048440,19041807,19041058,19036282	19122454,19068225,19065067,19063278,19057162,19048643,19041959,19041294,19039121	Gene ID= ENSG00000070413.19 TPM= 38.67 Transcript Type= protein_coding
chr22	19039691	19122454	19039691	19122454	-	transcript217.chr22.nic@DGCR2	transcript217.chr22.nic	protein_coding	19122128,19089368,19068100,19064848,19063202,19056986,19048440,19041807,19039691	19122454,19089490,19068225,19065067,19063278,19057162,19048643,19041959,19041294	Gene ID= ENSG00000070413.19 TPM= 8.37 Transcript Type= NA
chr22	19078858	19082632	19078858	19082632	+	transcript222.chr22.nnic@NA	transcript222.chr22.nnic	NA	19078858	19082632	Gene ID= novel_gene_chr22_223 TPM= 2.34 Transcript Type= NA
chr22	19130279	19144684	19130279	19144684	-	ENST00000252137.10@ESS2	ENST00000252137.10	protein_coding	19144506,19142726,19142538,19139855,19139612,19139159,19138215,19137323,19135060,19130279	19144684,19142894,19142633,19140024,19139729,19139292,19138317,19137432,19135175,19134475	Gene ID= ENSG00000100056.11 TPM= 16.35 Transcript Type= protein_coding
chr22	19133968	19144633	19133968	19144633	-	ENST00000472073.1@ESS2	ENST00000472073.1	protein_coding	19144057,19142726,19142538,19139855,19139612,19139159,19138215,19137323,19135060,19133968	19144633,19142894,19142633,19140024,19139729,19139292,19138317,19137432,19135175,19134475	Gene ID= ENSG00000100056.11 TPM= 3.5 Transcript Type= retained_intron
chr22	19171395	19172839	19171395	19172839	+	ENST00000565162.2@LINC01311	ENST00000565162.2	antisense_RNA	19171395	19172839	Gene ID= ENSG00000260924.2 TPM= 3.5 Transcript Type= antisense_RNA
chr22	19175575	19178814	19175575	19178814	-	transcript235.chr22.nic@SLC25A1	transcript235.chr22.nic	protein_coding	19178580,19178133,19177942,19177120,19176846,19176578,19176421,19175575	19178814,19178240,19178041,19177865,19176950,19176693,19176494,19176244	Gene ID= ENSG00000100075.9 TPM= 4.67 Transcript Type= NA
chr22	19175575	19178830	19175575	19178830	-	ENST00000215882.9@SLC25A1	ENST00000215882.9	protein_coding	19178580,19178133,19177942,19177727,19177120,19176846,19176578,19176421,19175575	19178830,19178240,19178041,19177865,19177204,19176950,19176693,19176494,19176244	Gene ID= ENSG00000100075.9 TPM= 168.72 Transcript Type= protein_coding
chr22	19175593	19178521	19175593	19178521	-	ENST00000451283.5@SLC25A1	ENST00000451283.5	protein_coding	19178387,19178133,19177942,19177727,19177120,19176846,19176578,19176421,19175593	19178521,19178240,19178041,19177865,19177204,19176950,19176693,19176494,19176244	Gene ID= ENSG00000100075.9 TPM= 9.92 Transcript Type= protein_coding
chr22	19179473	19291685	19179473	19291685	-	ENST00000621271.4@CLTCL1	ENST00000621271.4	protein_coding	19291600,19275623,19253959,19242775,19239275,19235696,19234509,19233422,19233166,19232476,19229838,19226219,19225453,19223891,19222684,19221951,19221377,19219885,19216111,19210326,19208922,19208154,19201329,19199734,19196489,19196266,19191304,19187981,19183390,19180731,19180199,19179473	19291685,19275830,19254227,19242936,19239388,19235869,19234706,19233622,19233318,19232598,19229975,19226383,19225633,19224054,19222809,19222093,19221611,19220007,19216256,19210509,19209114,19208311,19201493,19199841,19196656,19196415,19191435,19188091,19183611,19180806,19180238,19179969	Gene ID= ENSG00000070371.15 TPM= 4.09 Transcript Type= protein_coding
chr22	19179473	19291714	19179473	19291714	-	ENST00000427926.5@CLTCL1	ENST00000427926.5	protein_coding	19291600,19275623,19253959,19242775,19239275,19235696,19234509,19233422,19233166,19232476,19229838,19226219,19225453,19223891,19222684,19221951,19221377,19219885,19216111,19210326,19208922,19208154,19201329,19199734,19196489,19196266,19191304,19187981,19187558,19183390,19180731,19180199,19179473	19291714,19275830,19254227,19242936,19239388,19235869,19234706,19233622,19233318,19232598,19229975,19226383,19225633,19224054,19222809,19222093,19221611,19220007,19216256,19210509,19209114,19208311,19201493,19199841,19196656,19196415,19191435,19188091,19187728,19183611,19180806,19180238,19179969	Gene ID= ENSG00000070371.15 TPM= 4.09 Transcript Type= protein_coding
chr22	19330698	19431733	19330698	19431733	-	ENST00000263208.5@HIRA	ENST00000263208.5	protein_coding	19431440,19410716,19408483,19407184,19405786,19397992,19396787,19394342,19392101,19388484,19387711,19385521,19383620,19377869,19375631,19361727,19361237,19359336,19356890,19356230,19355760,19353996,19353356,19351358,19330698	19431733,19410778,19408593,19407274,19405880,19398087,19396947,19394509,19392214,19388554,19387816,19385736,19383705,19378066,19375792,19361931,19361341,19359484,19357051,19356288,19355865,19354118,19353519,19351446,19331556	Gene ID= ENSG00000100084.14 TPM= 17.51 Transcript Type= protein_coding
chr22	19425122	19429206	19425122	19429206	+	transcript255.chr22.nnic@NA	transcript255.chr22.nnic	NA	19425122	19429206	Gene ID= novel_gene_chr22_256 TPM= 2.34 Transcript Type= NA
chr22	19431902	19436075	19431902	19436075	+	ENST00000333130.3@MRPL40	ENST00000333130.3	protein_coding	19431902,19433265,19434736,19435638	19432607,19433348,19434894,19436075	Gene ID= ENSG00000185608.8 TPM= 26.85 Transcript Type= protein_coding
chr22	19432579	19436067	19432579	19436067	+	ENST00000443660.5@MRPL40	ENST00000443660.5	protein_coding	19432579,19433265,19434736,19435638	19432859,19433348,19434894,19436067	Gene ID= ENSG00000185608.8 TPM= 1.17 Transcript Type= processed_transcript
chr22	19440886	19447714	19440886	19447714	-	transcript271.chr22.nnic@C22orf39	transcript271.chr22.nnic	protein_coding	19447665,19447378,19444012,19440886	19447714,19447545,19444390,19441694	Gene ID= ENSG00000242259.8 TPM= 3.5 Transcript Type= NA
chr22	19440908	19448232	19440908	19448232	-	ENST00000542103.5@C22orf39	ENST00000542103.5	protein_coding	19447665,19447378,19440908	19448232,19447545,19441694	Gene ID= ENSG00000242259.8 TPM= 3.5 Transcript Type= protein_coding
chr22	19441777	19448232	19441777	19448232	-	ENST00000399562.8@C22orf39	ENST00000399562.8	protein_coding	19447665,19447378,19441777	19448232,19447545,19444390	Gene ID= ENSG00000242259.8 TPM= 7.01 Transcript Type= protein_coding
chr22	19443150	19448232	19443150	19448232	-	ENST00000611555.4@C22orf39	ENST00000611555.4	protein_coding	19447665,19447378,19443150	19448232,19447545,19444390	Gene ID= ENSG00000242259.8 TPM= 12.84 Transcript Type= protein_coding
chr22	19445674	19447707	19445674	19447707	-	transcript280.chr22.nic@C22orf39	transcript280.chr22.nic	protein_coding	19447665,19445674	19447707,19447545	Gene ID= ENSG00000242259.8 TPM= 4.67 Transcript Type= NA
chr22	19443371	19447697	19443371	19447697	-	ENST00000333059.5@C22orf39	ENST00000333059.5	protein_coding	19447665,19447378,19443371	19447697,19447545,19444390	Gene ID= ENSG00000242259.8 TPM= 16.35 Transcript Type= protein_coding
chr22	19449910	19479215	19449910	19479215	-	ENST00000263202.14@UFD1	ENST00000263202.14	protein_coding	19479083,19475470,19475068,19471687,19467873,19465202,19458071,19456853,19456587,19455680,19454749,19449910	19479215,19475602,19475100,19471808,19468003,19465274,19458139,19456918,19456634,19455768,19454830,19450744	Gene ID= ENSG00000070010.18 TPM= 65.39 Transcript Type= protein_coding
chr22	19450621	19479195	19450621	19479195	-	transcript265.chr22.nnic@UFD1	transcript265.chr22.nnic	protein_coding	19479083,19475068,19471687,19467873,19465202,19458071,19456853,19456587,19455680,19454749,19450621	19479195,19475100,19471808,19468003,19465274,19458139,19456918,19456634,19455768,19454830,19450744	Gene ID= ENSG00000070010.18 TPM= 4.67 Transcript Type= NA
chr22	19450621	19479198	19450621	19479198	-	transcript268.chr22.nic@UFD1	transcript268.chr22.nic	protein_coding	19479083,19471687,19467873,19465202,19458071,19456853,19456587,19455680,19454749,19450621	19479198,19471808,19468003,19465274,19458139,19456918,19456634,19455768,19454830,19450744	Gene ID= ENSG00000070010.18 TPM= 4.67 Transcript Type= NA
chr22	19450621	19479172	19450621	19479172	-	ENST00000459854.5@UFD1	ENST00000459854.5	protein_coding	19479083,19475496,19475068,19471687,19467873,19465202,19458071,19456853,19456587,19455680,19450621	19479172,19475602,19475100,19471808,19468003,19465274,19458139,19456918,19456634,19455768,19454830	Gene ID= ENSG00000070010.18 TPM= 7.01 Transcript Type= retained_intron
chr22	19523022	19524409	19523022	19524409	-	transcript283.chr22.nnic@CLDN5	transcript283.chr22.nnic	protein_coding	19524187,19523022	19524409,19523891	Gene ID= ENSG00000184113.9 TPM= 3.5 Transcript Type= NA
chr22	19523024	19527545	19523024	19527545	-	ENST00000406028.1@CLDN5	ENST00000406028.1	protein_coding	19526517,19523024	19527545,19524542	Gene ID= ENSG00000184113.9 TPM= 16.93 Transcript Type= protein_coding
chr22	19523052	19525423	19523052	19525423	-	ENST00000413119.2@CLDN5	ENST00000413119.2	protein_coding	19525155,19523052	19525423,19524542	Gene ID= ENSG00000184113.9 TPM= 112.67 Transcript Type= protein_coding
chr22	19523027	19524400	19523027	19524400	-	ENST00000618236.1@CLDN5	ENST00000618236.1	protein_coding	19523027	19524400	Gene ID= ENSG00000184113.9 TPM= 2032.2 Transcript Type= protein_coding
chr22	19523027	19525383	19523027	19525383	-	ENST00000403084.1@CLDN5	ENST00000403084.1	protein_coding	19523027	19525383	Gene ID= ENSG00000184113.9 TPM= 65.97 Transcript Type= protein_coding
chr22	19718151	19723319	19718151	19723319	+	transcript289.chr22.nnic@SEPT5	transcript289.chr22.nnic	protein_coding	19718151,19719602,19719806,19720115,19720320,19720549,19720768,19721640,19721822,19722237,19722428	19719212,19719698,19719892,19720238,19720454,19720666,19720869,19721736,19721957,19722339,19723319	Gene ID= ENSG00000184702.18 TPM= 3.79 Transcript Type= NA
chr22	19717220	19724216	19717220	19724216	+	ENST00000455843.5@SEPT5	ENST00000455843.5	protein_coding	19717220,19719602,19719806,19720115,19720320,19720549,19720768,19721640,19721822,19722237,19722428,19723854	19718818,19719698,19719892,19720238,19720454,19720666,19720869,19721736,19721957,19722339,19723579,19724216	Gene ID= ENSG00000184702.18 TPM= 16.64 Transcript Type= nonsense_mediated_decay
chr22	19717202	19723319	19717202	19723319	+	transcript294.chr22.nic@SEPT5	transcript294.chr22.nic	protein_coding	19717202,19719806,19720115,19720320,19720549,19720768,19721640,19721822,19722237,19722428	19719698,19719892,19720238,19720454,19720666,19720869,19721736,19721957,19722339,19723319	Gene ID= ENSG00000184702.18 TPM= 2.63 Transcript Type= NA
chr22	19714464	19723319	19714464	19723319	+	ENST00000455784.6@SEPT5	ENST00000455784.6	protein_coding	19714464,19714781,19719602,19719806,19720115,19720320,19720549,19720768,19721640,19721822,19722237,19722428	19714631,19714791,19719698,19719892,19720238,19720454,19720666,19720869,19721736,19721957,19722339,19723319	Gene ID= ENSG00000184702.18 TPM= 10.8 Transcript Type= protein_coding
chr22	19718432	19722629	19718432	19722629	+	ENST00000383045.7@SEPT5	ENST00000383045.7	protein_coding	19718432,19719602,19719806,19720115,19720320,19720549,19720768,19721640,19721822,19722237,19722428	19718818,19719698,19719892,19720238,19720454,19720666,19720869,19721736,19721957,19722339,19722629	Gene ID= ENSG00000184702.18 TPM= 1.17 Transcript Type= protein_coding
chr22	19718458	19723319	19718458	19723319	+	ENST00000438754.6@SEPT5	ENST00000438754.6	protein_coding	19718458,19719602,19719806,19720115,19720320,19720549,19720768,19721640,19721833,19722237,19722428	19718818,19719698,19719892,19720238,19720454,19720666,19720869,19721736,19721957,19722339,19723319	Gene ID= ENSG00000184702.18 TPM= 16.35 Transcript Type= protein_coding
chr22	19722945	19724771	19722945	19724771	+	ENST00000366425.3@GP1BB	ENST00000366425.3	protein_coding	19722945,19723854	19723579,19724771	Gene ID= ENSG00000203618.5 TPM= 4.67 Transcript Type= protein_coding
chr22	19758767	19767334	19758767	19767334	+	transcript299.chr22.nnic@TBX1	transcript299.chr22.nnic	protein_coding	19758767,19759558,19760905,19763241,19764155,19764958,19765758,19765902,19766389	19758988,19759677,19761280,19763342,19764326,19765113,19765825,19766002,19767334	Gene ID= ENSG00000184058.13 TPM= 4.96 Transcript Type= NA
chr22	19758769	19767334	19758769	19767334	+	transcript300.chr22.nnic@TBX1	transcript300.chr22.nnic	protein_coding	19758769,19759558,19760905,19763241,19764155,19764958,19765758,19765902,19766389	19758954,19759677,19761280,19763342,19764326,19765113,19765825,19766002,19767334	Gene ID= ENSG00000184058.13 TPM= 4.96 Transcript Type= NA
chr22	19758768	19767334	19758768	19767334	+	transcript302.chr22.nnic@TBX1	transcript302.chr22.nnic	protein_coding	19758768,19763241,19764155,19764958,19765758,19765902,19766389	19759677,19763342,19764326,19765113,19765825,19766002,19767334	Gene ID= ENSG00000184058.13 TPM= 4.96 Transcript Type= NA
chr22	19760752	19767334	19760752	19767334	+	transcript303.chr22.nic@TBX1	transcript303.chr22.nic	protein_coding	19760752,19763241,19764155,19764958,19765758,19765902,19766389	19761280,19763342,19764326,19765113,19765825,19766002,19767334	Gene ID= ENSG00000184058.13 TPM= 7.3 Transcript Type= NA
chr22	19768955	19772640	19768955	19772640	-	transcript304.chr22.nnic@NA	transcript304.chr22.nnic	NA	19768955	19772640	Gene ID= novel_gene_chr22_305 TPM= 9.34 Transcript Type= NA
chr22	19788415	19854848	19788415	19854848	-	transcript307.chr22.nic@GNB1L	transcript307.chr22.nic	protein_coding	19854660,19854443,19821228,19820598,19812285,19806659,19802001,19788415	19854848,19854539,19821375,19820723,19812447,19806757,19802216,19788960	Gene ID= ENSG00000185838.13 TPM= 5.25 Transcript Type= NA
chr22	19783224	19854939	19783224	19854939	-	ENST00000329517.10@GNB1L	ENST00000329517.10	protein_coding	19854820,19854443,19821228,19820598,19812285,19806659,19802001,19783224	19854939,19854539,19821375,19820723,19812447,19806757,19802216,19788960	Gene ID= ENSG00000185838.13 TPM= 7.01 Transcript Type= protein_coding
chr22	19788415	19854843	19788415	19854843	-	ENST00000403325.5@GNB1L	ENST00000403325.5	protein_coding	19854443,19821228,19820598,19812285,19806659,19802001,19788415	19854843,19821375,19820723,19812447,19806757,19802216,19788960	Gene ID= ENSG00000185838.13 TPM= 2.92 Transcript Type= protein_coding
chr22	19846138	19854896	19846138	19854896	-	ENST00000407472.5@RTL10	ENST00000407472.5	protein_coding	19854820,19854443,19846138	19854896,19854539,19852486	Gene ID= ENSG00000215012.8 TPM= 6.62 Transcript Type= protein_coding
chr22	19846146	19854840	19846146	19854840	-	ENST00000328554.8@RTL10	ENST00000328554.8	protein_coding	19854660,19854443,19846146	19854840,19854539,19852486	Gene ID= ENSG00000215012.8 TPM= 6.62 Transcript Type= protein_coding
chr22	19846146	19854886	19846146	19854886	-	ENST00000405640.1@RTL10	ENST00000405640.1	protein_coding	19854443,19846146	19854886,19852486	Gene ID= ENSG00000215012.8 TPM= 7.79 Transcript Type= protein_coding
chr22	19875517	19932553	19875517	19932553	-	ENST00000400518.5@TXNRD2	ENST00000400518.5	protein_coding	19932357,19931030,19919543,19918860,19918143,19915765,19915214,19911377,19899049,19898039,19895407,19883325,19880622,19880179,19878366,19878090,19877040,19875517	19932553,19931098,19919599,19919004,19918217,19915843,19915276,19911447,19899068,19898130,19895581,19883461,19880717,19880271,19878437,19878187,19877234,19875807	Gene ID= ENSG00000184470.20 TPM= 3.5 Transcript Type= protein_coding
chr22	19875522	19941992	19875522	19941992	-	ENST00000400521.6@TXNRD2	ENST00000400521.6	protein_coding	19941701,19931030,19919543,19918860,19918143,19915765,19915214,19911377,19899049,19898039,19895407,19883325,19880622,19880179,19878366,19878090,19877040,19875522	19941992,19931098,19919599,19919004,19918217,19915843,19915276,19911447,19899068,19898130,19895581,19883461,19880717,19880271,19878437,19878187,19877234,19875807	Gene ID= ENSG00000184470.20 TPM= 42.03 Transcript Type= protein_coding
chr22	19875522	19941814	19875522	19941814	-	transcript345.chr22.nnic@TXNRD2	transcript345.chr22.nnic	protein_coding	19941701,19931030,19919543,19918860,19918143,19915765,19915214,19911377,19899049,19898039,19895407,19880622,19880179,19878366,19878090,19875522	19941814,19931098,19919599,19919004,19918217,19915843,19915276,19911447,19899068,19898130,19895581,19880717,19880271,19878437,19878187,19877234	Gene ID= ENSG00000184470.20 TPM= 3.5 Transcript Type= NA
chr22	19875522	19941803	19875522	19941803	-	ENST00000400519.6@TXNRD2	ENST00000400519.6	protein_coding	19941701,19931030,19919543,19918860,19918143,19915765,19915214,19911377,19899049,19898039,19895407,19883325,19880622,19880179,19878366,19878090,19875522	19941803,19931095,19919599,19919004,19918217,19915843,19915276,19911447,19899068,19898130,19895581,19883461,19880717,19880271,19878437,19878187,19877234	Gene ID= ENSG00000184470.20 TPM= 9.34 Transcript Type= protein_coding
chr22	19894258	19941804	19894258	19941804	-	ENST00000334363.14@TXNRD2	ENST00000334363.14	protein_coding	19941701,19931030,19919543,19918860,19918143,19915765,19915214,19911377,19899049,19898039,19895407,19894258	19941804,19931098,19919599,19919004,19918217,19915843,19915276,19911447,19899068,19898130,19895581,19895200	Gene ID= ENSG00000184470.20 TPM= 1.17 Transcript Type= protein_coding
chr22	19941799	19969016	19941799	19969016	+	transcript372.chr22.nnic@COMT	transcript372.chr22.nnic	protein_coding	19941799,19957940,19961199,19962527,19963566,19964168,19968536	19941897,19958007,19961289,19962815,19963759,19964299,19969016	Gene ID= ENSG00000093010.13 TPM= 48.65 Transcript Type= NA
chr22	19941607	19969975	19941607	19969975	+	ENST00000361682.10@COMT	ENST00000361682.10	protein_coding	19941607,19961199,19962527,19963566,19964168,19968536	19941897,19961289,19962815,19963759,19964299,19969975	Gene ID= ENSG00000093010.13 TPM= 26.47 Transcript Type= protein_coding
chr22	19969898	20016838	19969898	20016838	-	transcript325.chr22.nic@ARVCF	transcript325.chr22.nic	protein_coding	20016589,20010455,19990585,19981933,19981211,19979743,19978897,19977958,19977415,19976706,19975686,19974112,19973643,19973119,19972925,19972737,19972358,19971886,19969898	20016838,20010508,19990812,19982091,19981737,19980242,19979080,19978075,19977586,19976723,19975757,19974239,19973793,19973317,19973036,19972827,19972411,19971971,19970743	Gene ID= ENSG00000099889.13 TPM= 5.34 Transcript Type= NA
chr22	19969898	20016838	19969898	20016838	-	transcript331.chr22.nnic@ARVCF	transcript331.chr22.nnic	protein_coding	20016589,20010455,19990585,19981933,19981211,19979743,19978897,19977958,19977415,19976706,19975686,19974112,19973643,19972925,19972737,19972358,19971886,19969898	20016838,20010508,19990812,19982091,19981737,19980242,19979080,19978075,19977586,19976723,19975757,19974239,19973793,19973036,19972827,19972411,19971971,19970743	Gene ID= ENSG00000099889.13 TPM= 3 Transcript Type= NA
chr22	19969898	19987244	19969898	19987244	-	transcript347.chr22.nic@ARVCF	transcript347.chr22.nic	protein_coding	19987073,19981933,19981211,19979743,19978897,19977958,19977415,19975686,19974112,19973643,19973119,19972925,19972737,19972358,19971886,19969898	19987244,19982091,19981737,19980242,19979080,19978075,19977586,19975757,19974239,19973793,19973317,19973036,19972827,19972411,19971971,19970743	Gene ID= ENSG00000099889.13 TPM= 28.29 Transcript Type= NA
chr22	19969898	19987244	19969898	19987244	-	transcript348.chr22.nnic@ARVCF	transcript348.chr22.nnic	protein_coding	19987073,19981933,19981211,19979743,19978897,19977958,19977415,19975686,19974112,19973643,19973119,19972925,19972737,19972358,19971886,19969898	19987244,19982091,19981737,19980369,19979080,19978075,19977586,19975757,19974239,19973793,19973317,19973036,19972827,19972411,19971971,19970743	Gene ID= ENSG00000099889.13 TPM= 6.11 Transcript Type= NA
chr22	19969898	19987244	19969898	19987244	-	transcript361.chr22.nic@ARVCF	transcript361.chr22.nic	protein_coding	19987073,19981933,19978897,19977958,19977415,19975686,19974112,19973643,19973119,19972925,19972737,19972358,19971886,19969898	19987244,19982091,19981737,19978075,19977586,19975757,19974239,19973793,19973317,19973036,19972827,19972411,19971971,19970743	Gene ID= ENSG00000099889.13 TPM= 6.11 Transcript Type= NA
chr22	19969896	20016808	19969896	20016808	-	ENST00000263207.7@ARVCF	ENST00000263207.7	protein_coding	20016589,20010455,19990585,19981933,19981211,19979743,19978897,19977958,19977415,19976706,19975686,19974112,19973643,19973119,19972925,19972737,19972358,19971886,19971216,19969896	20016808,20010508,19990812,19982091,19981737,19980242,19979080,19978075,19977586,19976723,19975757,19974239,19973793,19973317,19973036,19972827,19972411,19971971,19971335,19970743	Gene ID= ENSG00000099889.13 TPM= 1.37 Transcript Type= protein_coding
chr22	20021089	20065926	20021089	20065926	+	transcript390.chr22.nic@TANGO2	transcript390.chr22.nic	protein_coding	20021089,20036760,20043355,20052465,20053437,20055943,20061530,20063338,20064542	20021134,20036854,20043443,20052584,20053551,20056013,20061683,20063442,20065926	Gene ID= ENSG00000183597.15 TPM= 21.16 Transcript Type= NA
chr22	20021069	20065925	20021069	20065925	+	ENST00000456048.5@TANGO2	ENST00000456048.5	protein_coding	20021069,20036760,20043355,20052465,20053437,20055943,20061530,20063338,20064542	20021134,20037094,20043443,20052584,20053551,20056013,20061683,20063442,20065925	Gene ID= ENSG00000183597.15 TPM= 10.85 Transcript Type= protein_coding
chr22	20021108	20065926	20021108	20065926	+	ENST00000327374.8@TANGO2	ENST00000327374.8	protein_coding	20021108,20036760,20043355,20052465,20053437,20055943,20061530,20063338,20064542	20021246,20036854,20043443,20052584,20053551,20056013,20061683,20063442,20065926	Gene ID= ENSG00000183597.15 TPM= 30.5 Transcript Type= protein_coding
chr22	20021069	20065925	20021069	20065925	+	ENST00000432883.5@TANGO2	ENST00000432883.5	protein_coding	20021069,20036760,20043355,20052465,20055943,20061530,20063338,20064542	20021134,20036854,20043443,20052584,20056013,20061683,20063442,20065925	Gene ID= ENSG00000183597.15 TPM= 3.26 Transcript Type= protein_coding
chr22	20021106	20065926	20021106	20065926	+	transcript399.chr22.nic@TANGO2	transcript399.chr22.nic	protein_coding	20021106,20036760,20043355,20052465,20055943,20061530,20063338,20064542	20021246,20036854,20043443,20052584,20056013,20061683,20063442,20065926	Gene ID= ENSG00000183597.15 TPM= 10.65 Transcript Type= NA
chr22	20021072	20065926	20021072	20065926	+	ENST00000398042.6@TANGO2	ENST00000398042.6	protein_coding	20021072,20036760,20043355,20052465,20061530,20063338,20064542	20021134,20036854,20043443,20052584,20061683,20063442,20065926	Gene ID= ENSG00000183597.15 TPM= 5.59 Transcript Type= protein_coding
chr22	20021106	20065926	20021106	20065926	+	transcript405.chr22.nic@TANGO2	transcript405.chr22.nic	protein_coding	20021106,20036760,20043355,20052465,20061530,20063338,20064542	20021246,20036854,20043443,20052584,20061683,20063442,20065926	Gene ID= ENSG00000183597.15 TPM= 11.43 Transcript Type= NA
chr22	20080232	20111871	20080232	20111871	+	ENST00000351989.7@DGCR8	ENST00000351989.7	protein_coding	20080232,20085687,20087162,20089669,20089976,20091435,20091869,20092809,20094713,20106177,20106592,20107271,20108890,20110025	20080383,20086683,20087321,20089811,20090258,20091632,20091970,20092907,20094795,20106277,20106698,20107398,20109003,20111871	Gene ID= ENSG00000128191.15 TPM= 23.35 Transcript Type= protein_coding
chr22	20082053	20084830	20082053	20084830	-	transcript454.chr22.nnic@NA	transcript454.chr22.nnic	NA	20082053	20084830	Gene ID= novel_gene_chr22_455 TPM= 9.34 Transcript Type= NA
chr22	20111875	20117392	20111875	20117392	-	ENST00000403707.7@TRMT2A	ENST00000403707.7	protein_coding	20117097,20116883,20116038,20115672,20115266,20114965,20114761,20114574,20113686,20113432,20113118,20112911,20111875	20117392,20116972,20116612,20115780,20115447,20115079,20114876,20114685,20113808,20113507,20113234,20113007,20112794	Gene ID= ENSG00000099899.14 TPM= 11.09 Transcript Type= protein_coding
chr22	20112301	20117258	20112301	20117258	-	transcript423.chr22.nic@TRMT2A	transcript423.chr22.nic	protein_coding	20117097,20116883,20116038,20114965,20114761,20114574,20113686,20113432,20113118,20112911,20112301	20117258,20116972,20116612,20115780,20114876,20114685,20113808,20113507,20113234,20113007,20112794	Gene ID= ENSG00000099899.14 TPM= 4.67 Transcript Type= NA
chr22	20112301	20117256	20112301	20117256	-	transcript426.chr22.nnic@TRMT2A	transcript426.chr22.nnic	protein_coding	20116883,20116038,20115672,20115266,20114965,20114761,20114574,20113686,20113432,20112911,20112301	20117256,20116612,20115780,20115447,20115079,20114876,20114685,20113808,20113507,20113007,20112794	Gene ID= ENSG00000099899.14 TPM= 3.5 Transcript Type= NA
chr22	20111875	20117244	20111875	20117244	-	transcript428.chr22.nic@TRMT2A	transcript428.chr22.nic	protein_coding	20116883,20116038,20114965,20114761,20114574,20113686,20113432,20113118,20112911,20111875	20117244,20116612,20115780,20114876,20114685,20113808,20113507,20113234,20113007,20112794	Gene ID= ENSG00000099899.14 TPM= 6.42 Transcript Type= NA
chr22	20112304	20117245	20112304	20117245	-	ENST00000404751.7@TRMT2A	ENST00000404751.7	protein_coding	20116883,20116038,20115672,20115266,20114965,20114761,20114574,20113686,20113432,20113118,20112911,20112304	20117245,20116612,20115780,20115447,20115079,20114876,20114685,20113808,20113507,20113234,20113007,20112816	Gene ID= ENSG00000099899.14 TPM= 37.36 Transcript Type= protein_coding
chr22	20112338	20117222	20112338	20117222	-	ENST00000439169.2@TRMT2A	ENST00000439169.2	protein_coding	20116883,20116038,20115672,20115266,20114965,20114761,20114574,20113686,20113432,20113118,20112911,20112338	20117222,20116612,20115780,20115447,20115079,20114876,20114685,20113808,20113561,20113234,20113007,20112794	Gene ID= ENSG00000099899.14 TPM= 3.5 Transcript Type= protein_coding
chr22	20117313	20127354	20117313	20127354	+	transcript449.chr22.nic@RANBP1	transcript449.chr22.nic	protein_coding	20117313,20119013,20122264,20125308,20126303	20117664,20119149,20122421,20125436,20127354	Gene ID= ENSG00000099901.16 TPM= 10.51 Transcript Type= NA
chr22	20117548	20127181	20117548	20127181	+	ENST00000331821.7@RANBP1	ENST00000331821.7	protein_coding	20117548,20119013,20122264,20125308,20126303,20126952	20117664,20119149,20122421,20125436,20126368,20127181	Gene ID= ENSG00000099901.16 TPM= 46.7 Transcript Type= protein_coding
chr22	20117424	20127355	20117424	20127355	+	ENST00000402752.5@RANBP1	ENST00000402752.5	protein_coding	20117424,20119013,20122264,20125308,20126303,20126955	20117664,20119149,20122421,20125436,20126368,20127355	Gene ID= ENSG00000099901.16 TPM= 67.72 Transcript Type= protein_coding
chr22	20131807	20148007	20131807	20148007	+	ENST00000334554.11@ZDHHC8	ENST00000334554.11	protein_coding	20131807,20139194,20139478,20139720,20140115,20140617,20140871,20141217,20141421,20142756,20145229	20132051,20139315,20139635,20139892,20140217,20140708,20141012,20141337,20141530,20143756,20148007	Gene ID= ENSG00000099904.15 TPM= 11.09 Transcript Type= protein_coding
chr22	20131948	20148006	20131948	20148006	+	ENST00000405930.3@ZDHHC8	ENST00000405930.3	protein_coding	20131948,20139194,20139478,20139720,20140115,20140617,20140871,20141217,20141421,20142756,20147021	20132051,20139315,20139635,20139892,20140217,20140708,20141012,20141337,20141530,20143756,20148006	Gene ID= ENSG00000099904.15 TPM= 6.42 Transcript Type= protein_coding
chr22	20241415	20268531	20241415	20268531	-	ENST00000043402.7@RTN4R	ENST00000043402.7	protein_coding	20268071,20241415	20268531,20243110	Gene ID= ENSG00000040608.13 TPM= 25.69 Transcript Type= protein_coding
chr22	20241417	20243684	20241417	20243684	-	ENST00000425986.1@RTN4R	ENST00000425986.1	protein_coding	20243406,20241417	20243684,20243110	Gene ID= ENSG00000040608.13 TPM= 2.34 Transcript Type= protein_coding
chr22	20314276	20320080	20314276	20320080	-	ENST00000248879.7@DGCR6L	ENST00000248879.7	protein_coding	20319879,20319639,20316119,20315336,20314276	20320080,20319799,20316219,20315476,20314824	Gene ID= ENSG00000128185.9 TPM= 107.42 Transcript Type= protein_coding
chr22	20314283	20320009	20314283	20320009	-	ENST00000405465.3@DGCR6L	ENST00000405465.3	protein_coding	20319879,20319639,20315336,20314283	20320009,20319786,20315476,20314824	Gene ID= ENSG00000128185.9 TPM= 5.84 Transcript Type= protein_coding
chr22	20389263	20393317	20389263	20393317	-	transcript478.chr22.nnic@NA	transcript478.chr22.nnic	NA	20389263	20393317	Gene ID= novel_gene_chr22_479 TPM= 4.67 Transcript Type= NA
chr22	20394115	20407678	20394115	20407678	+	ENST00000400451.6@ZNF74	ENST00000400451.6	protein_coding	20394115,20395333,20400632,20401277,20405377	20394662,20395418,20400758,20401372,20407678	Gene ID= ENSG00000185252.18 TPM= 15.18 Transcript Type= protein_coding
chr22	20424584	20437929	20424584	20437929	-	transcript480.chr22.nnic@SCARF2	transcript480.chr22.nnic	protein_coding	20437582,20431930,20431745,20431018,20430680,20430429,20429730,20429536,20429225,20427398,20424584	20437929,20431988,20431846,20431537,20430908,20430553,20429833,20429653,20429340,20427550,20426282	Gene ID= ENSG00000244486.8 TPM= 16.93 Transcript Type= NA
chr22	20424584	20437108	20424584	20437108	-	transcript486.chr22.nnic@SCARF2	transcript486.chr22.nnic	protein_coding	20436956,20431930,20431745,20430690,20430429,20429730,20429536,20429225,20427398,20424584	20437108,20432102,20431846,20431537,20430557,20429833,20429653,20429340,20427550,20426282	Gene ID= ENSG00000244486.8 TPM= 18.1 Transcript Type= NA
chr22	20424584	20437929	20424584	20437929	-	transcript491.chr22.nnic@SCARF2	transcript491.chr22.nnic	protein_coding	20437582,20431930,20431745,20430690,20430429,20429730,20429536,20427398,20424584	20437929,20431988,20431846,20430908,20430557,20429833,20429653,20427550,20426282	Gene ID= ENSG00000244486.8 TPM= 17.51 Transcript Type= NA
chr22	20441519	20495883	20441519	20495883	-	ENST00000328879.8@KLHL22	ENST00000328879.8	protein_coding	20495760,20488985,20471350,20464858,20457808,20446443,20441519	20495883,20489244,20471515,20465576,20458000,20446676,20442438	Gene ID= ENSG00000099910.16 TPM= 37.36 Transcript Type= protein_coding
chr22	20507602	20587632	20507602	20587632	+	ENST00000292733.11@MED15	ENST00000292733.11	protein_coding	20507602,20537117,20551436,20553145,20554936,20564450,20566467,20568521,20582611,20582840,20583113,20583330,20584359,20584855,20585101,20585728,20586568	20507746,20537204,20551487,20553174,20555148,20564688,20566817,20568631,20582747,20582967,20583247,20583393,20584425,20585015,20585267,20585826,20587632	Gene ID= ENSG00000099917.17 TPM= 60.33 Transcript Type= protein_coding
chr22	20507610	20587619	20507610	20587619	+	ENST00000263205.11@MED15	ENST00000263205.11	protein_coding	20507610,20537117,20551436,20553145,20554936,20564450,20566467,20568521,20575113,20582611,20582840,20583113,20583330,20584359,20584855,20585101,20585728,20586568	20507746,20537204,20551487,20553174,20555148,20564688,20566817,20568631,20575232,20582747,20582967,20583247,20583393,20584425,20585015,20585267,20585826,20587619	Gene ID= ENSG00000099917.17 TPM= 71.42 Transcript Type= protein_coding
chr22	20507585	20587619	20507585	20587619	+	ENST00000433831.5@MED15	ENST00000433831.5	protein_coding	20507585,20537117,20551436,20553145,20554936,20564450,20566467,20568521,20582611,20582840,20583113,20583330,20584359,20584855,20585101,20585728,20586568	20507746,20537215,20551487,20553174,20555148,20564688,20566817,20568631,20582747,20582967,20583247,20583393,20584425,20585015,20585267,20585826,20587619	Gene ID= ENSG00000099917.17 TPM= 27.05 Transcript Type= nonsense_mediated_decay
chr22	20702820	20704602	20702820	20704602	+	transcript527.chr22.nic@TMEM191A	transcript527.chr22.nic	transcribed_unprocessed_pseudogene	20702820,20703006,20703468,20703633,20703968,20704188,20704311	20702893,20703122,20703524,20703751,20704040,20704228,20704602	Gene ID= ENSG00000226287.8 TPM= 3.5 Transcript Type= NA
chr22	20759403	20858831	20759403	20858831	-	transcript524.chr22.nic@PI4KA	transcript524.chr22.nic	protein_coding	20858570,20838615,20834562,20824326,20820539,20819641,20818483,20813358,20810967,20807362,20804974,20804300,20803191,20801973,20799671,20799093,20798584,20796146,20793193,20765585,20765100,20764817,20759403	20858831,20838731,20834655,20824414,20820611,20819900,20818549,20813506,20811032,20807458,20805165,20804400,20803320,20802105,20799766,20799276,20798687,20796314,20793243,20765693,20765236,20764950,20761386	Gene ID= ENSG00000241973.10 TPM= 4.29 Transcript Type= NA
chr22	20707691	20858812	20707691	20858812	-	ENST00000255882.10@PI4KA	ENST00000255882.10	protein_coding	20858570,20838615,20834562,20824326,20820539,20819641,20818483,20813358,20810967,20807362,20804974,20804300,20803191,20801973,20799671,20799093,20798584,20796146,20793193,20765585,20765100,20764817,20761304,20753110,20752903,20751674,20751293,20749905,20747583,20744628,20742608,20742228,20734395,20734043,20733736,20732971,20729892,20729632,20729313,20727774,20727230,20726488,20721298,20718693,20717708,20714628,20714458,20713281,20712693,20712486,20711341,20710699,20709908,20709296,20707691	20858812,20838731,20834655,20824414,20820611,20819900,20818549,20813506,20811032,20807458,20805165,20804400,20803320,20802105,20799766,20799276,20798687,20796314,20793243,20765693,20765236,20764950,20761386,20753180,20753027,20751755,20751376,20749994,20747702,20744720,20742764,20742355,20734553,20734194,20733843,20733098,20730011,20729711,20729506,20727864,20727397,20726541,20721418,20718822,20717778,20714700,20714528,20713390,20712797,20712611,20711461,20710858,20709997,20709379,20708098	Gene ID= ENSG00000241973.10 TPM= 114.04 Transcript Type= protein_coding
chr22	20798478	20858812	20798478	20858812	-	ENST00000485963.5@PI4KA	ENST00000485963.5	protein_coding	20858570,20838615,20834562,20824326,20820539,20819641,20818483,20813358,20810967,20807362,20804974,20804300,20803191,20801973,20799671,20799093,20798478	20858812,20838731,20834655,20824414,20820611,20819900,20818549,20813506,20811032,20807458,20805165,20804400,20803320,20802105,20799766,20799276,20798687	Gene ID= ENSG00000241973.10 TPM= 1.95 Transcript Type= retained_intron
chr22	20724534	20725926	20724534	20725926	+	transcript536.chr22.nnic@NA	transcript536.chr22.nnic	NA	20724534	20725926	Gene ID= novel_gene_chr22_537 TPM= 2.34 Transcript Type= NA
chr22	20773879	20787720	20773879	20787720	+	ENST00000215727.9@SERPIND1	ENST00000215727.9	protein_coding	20773879,20779297,20783972,20786004,20786875	20774145,20780201,20784245,20786148,20787720	Gene ID= ENSG00000099937.10 TPM= 2.34 Transcript Type= protein_coding
chr22	20815146	20817770	20815146	20817770	+	transcript534.chr22.nnic@NA	transcript534.chr22.nnic	NA	20815146	20817770	Gene ID= novel_gene_chr22_535 TPM= 12.84 Transcript Type= NA
chr22	20858983	20891218	20858983	20891218	+	ENST00000215730.11@SNAP29	ENST00000215730.11	protein_coding	20858983,20870337,20881049,20883471,20887679	20859347,20870533,20881134,20883569,20891218	Gene ID= ENSG00000099940.11 TPM= 15.18 Transcript Type= protein_coding
chr22	20917407	20953747	20917407	20953747	+	transcript551.chr22.nnic@CRKL	transcript551.chr22.nnic	protein_coding	20917407,20933779,20949711,20953206	20918245,20934244,20951265,20953747	Gene ID= ENSG00000099942.12 TPM= 8.56 Transcript Type= NA
chr22	20917426	20953749	20917426	20953749	+	ENST00000354336.7@CRKL	ENST00000354336.7	protein_coding	20917426,20933779,20949711	20918245,20934244,20953749	Gene ID= ENSG00000099942.12 TPM= 73.94 Transcript Type= protein_coding
chr22	20957092	20964679	20957092	20964679	+	ENST00000444039.1@LINC01637	ENST00000444039.1	lincRNA	20957092,20964391	20957486,20964679	Gene ID= ENSG00000237476.1 TPM= 3.5 Transcript Type= lincRNA
chr22	20982314	20999032	20982314	20999032	+	transcript558.chr22.nic@LZTR1	transcript558.chr22.nic	protein_coding	20982314,20983027,20985841,20987504,20988010,20988789,20989625,20990386,20991628,20992214,20992794,20993662,20993924,20994104,20994558,20994915,20995746,20995963,20996696,20996886,20997232	20982571,20983089,20985897,20987583,20988118,20988872,20989682,20990525,20991829,20992369,20992904,20993754,20994019,20994269,20994727,20995026,20995872,20996112,20996801,20996966,20999032	Gene ID= ENSG00000099949.18 TPM= 13.81 Transcript Type= NA
chr22	20982290	20999032	20982290	20999032	+	transcript561.chr22.nic@LZTR1	transcript561.chr22.nic	protein_coding	20982290,20983027,20985841,20987504,20988010,20988789,20989625,20990386,20991628,20992214,20992794,20993662,20993924,20994104,20994870,20995746,20995963,20996696,20996886,20997232	20982571,20983089,20985897,20987583,20988118,20988872,20989682,20990525,20991829,20992369,20992904,20993754,20994019,20994727,20995026,20995872,20996112,20996801,20996966,20999032	Gene ID= ENSG00000099949.18 TPM= 21.99 Transcript Type= NA
chr22	20982013	20999038	20982013	20999038	+	ENST00000215739.12@LZTR1	ENST00000215739.12	protein_coding	20982013,20983027,20985841,20987504,20988010,20988789,20989625,20990386,20991628,20992214,20992794,20993662,20993924,20994104,20994558,20994870,20995746,20995963,20996696,20996886,20997232	20982571,20983089,20985897,20987583,20988118,20988872,20989682,20990525,20991829,20992369,20992904,20993754,20994019,20994269,20994727,20995026,20995872,20996112,20996801,20996966,20999038	Gene ID= ENSG00000099949.18 TPM= 56.43 Transcript Type= protein_coding
chr22	20999777	21002196	20999777	21002196	-	ENST00000399133.2@THAP7	ENST00000399133.2	protein_coding	21002086,21001832,21001256,21000647,20999777	21002196,21001911,21001411,21000787,21000432	Gene ID= ENSG00000184436.11 TPM= 14.59 Transcript Type= protein_coding
chr22	20999777	21001783	20999777	21001783	-	transcript570.chr22.nnic@THAP7	transcript570.chr22.nnic	protein_coding	21001707,21001256,21000647,20999777	21001783,21001411,21000787,21000432	Gene ID= ENSG00000184436.11 TPM= 5.25 Transcript Type= NA
chr22	20999773	21001795	20999773	21001795	-	ENST00000471073.1@THAP7	ENST00000471073.1	protein_coding	21000647,20999773	21001795,21000432	Gene ID= ENSG00000184436.11 TPM= 16.93 Transcript Type= retained_intron
chr22	20999772	21002086	20999772	21002086	-	ENST00000215742.8@THAP7	ENST00000215742.8	protein_coding	21001832,21001256,21000647,20999772	21002086,21001411,21000787,21000432	Gene ID= ENSG00000184436.11 TPM= 6.42 Transcript Type= protein_coding
chr22	21001852	21003263	21001852	21003263	+	transcript575.chr22.nnic@NA	transcript575.chr22.nnic	NA	21001852	21003263	Gene ID= novel_gene_chr22_576 TPM= 2.34 Transcript Type= NA
chr22	21028718	21032549	21028718	21032549	-	ENST00000403586.5@SLC7A4	ENST00000403586.5	protein_coding	21032531,21030831,21029711,21029336,21028718	21032549,21031855,21030351,21029444,21029230	Gene ID= ENSG00000099960.12 TPM= 1.17 Transcript Type= protein_coding
chr22	21028718	21032558	21028718	21032558	-	ENST00000382932.2@SLC7A4	ENST00000382932.2	protein_coding	21032531,21030831,21029711,21029336,21028718	21032558,21031852,21030351,21029444,21029230	Gene ID= ENSG00000099960.12 TPM= 4.67 Transcript Type= protein_coding
chr22	21207974	21227637	21207974	21227637	-	ENST00000401924.5@GGT2	ENST00000401924.5	protein_coding	21227396,21226594,21226105,21225391,21222084,21221866,21216471,21215925,21213725,21213065,21209359,21208999,21208784,21208589,21207974	21227637,21226662,21226278,21225561,21222214,21221952,21216667,21216078,21213874,21213201,21209546,21209126,21208896,21208702,21208284	Gene ID= ENSG00000133475.17 TPM= 3.5 Transcript Type= protein_coding
chr22	21207973	21225554	21207973	21225554	-	ENST00000405188.8@GGT2	ENST00000405188.8	protein_coding	21225391,21222084,21221866,21216471,21215925,21213725,21213065,21209359,21208999,21208784,21208589,21207973	21225554,21222214,21221952,21216667,21216078,21213874,21213201,21209546,21209096,21208896,21208702,21208284	Gene ID= ENSG00000133475.17 TPM= 1.17 Transcript Type= protein_coding
chr22	21473000	21517525	21473000	21517525	-	transcript588.chr22.nic@PI4KAP2	transcript588.chr22.nic	transcribed_unprocessed_pseudogene	21517325,21491994,21488224,21487872,21487565,21486800,21484005,21483020,21479930,21479759,21478585,21477997,21477790,21476644,21476002,21475211,21474597,21473000	21517525,21492094,21488381,21488023,21487672,21486927,21484134,21483090,21480002,21479829,21478694,21478101,21477915,21476764,21476160,21475300,21474680,21473405	Gene ID= ENSG00000183506.17 TPM= 13.6 Transcript Type= NA
chr22	21473000	21517525	21473000	21517525	-	transcript593.chr22.nic@PI4KAP2	transcript593.chr22.nic	transcribed_unprocessed_pseudogene	21517325,21491994,21488224,21487872,21487565,21486800,21484005,21483020,21479930,21479759,21478585,21477997,21477790,21476002,21475211,21474597,21473000	21517525,21492094,21488381,21488023,21487672,21486927,21484134,21483090,21480002,21479829,21478694,21478101,21477915,21476764,21475300,21474680,21473405	Gene ID= ENSG00000183506.17 TPM= 7.47 Transcript Type= NA
chr22	21473023	21488382	21473023	21488382	-	ENST00000462560.6@PI4KAP2	ENST00000462560.6	transcribed_unprocessed_pseudogene	21488224,21487872,21487565,21486800,21484005,21483020,21479930,21479759,21478585,21477997,21477790,21476002,21475211,21474597,21473023	21488382,21488023,21487672,21486927,21484134,21483090,21480002,21479829,21478694,21478101,21477915,21476764,21475300,21474680,21473405	Gene ID= ENSG00000183506.17 TPM= 9.52 Transcript Type= retained_intron
chr22	21477413	21517520	21477413	21517520	-	ENST00000479693.1@PI4KAP2	ENST00000479693.1	transcribed_unprocessed_pseudogene	21517325,21491994,21488224,21487872,21487565,21486800,21484005,21483020,21479930,21479759,21478585,21477997,21477413	21517520,21492094,21488381,21488023,21487672,21486927,21484134,21483090,21480002,21479829,21478694,21478101,21477915	Gene ID= ENSG00000183506.17 TPM= 3.68 Transcript Type= retained_intron
chr22	21567547	21624034	21567547	21624034	+	ENST00000342192.8@UBE2L3	ENST00000342192.8	protein_coding	21567547,21592861,21610857,21621515	21567771,21592956,21611043,21624034	Gene ID= ENSG00000185651.14 TPM= 50.79 Transcript Type= protein_coding
chr22	21567547	21624034	21567547	21624034	+	ENST00000545681.2@UBE2L3	ENST00000545681.2	protein_coding	21567547,21610857,21621515	21567771,21611043,21624034	Gene ID= ENSG00000185651.14 TPM= 6.42 Transcript Type= protein_coding
chr22	21628089	21630064	21628089	21630064	-	ENST00000415762.6@YDJC	ENST00000415762.6	protein_coding	21629851,21629543,21629308,21629010,21628089	21630064,21629761,21629407,21629187,21628787	Gene ID= ENSG00000161179.13 TPM= 10.41 Transcript Type= nonsense_mediated_decay
chr22	21628089	21630064	21628089	21630064	-	ENST00000292778.10@YDJC	ENST00000292778.10	protein_coding	21629851,21629602,21629308,21629010,21628089	21630064,21629761,21629407,21629187,21628787	Gene ID= ENSG00000161179.13 TPM= 9.25 Transcript Type= protein_coding
chr22	21628089	21630053	21628089	21630053	-	transcript624.chr22.nic@YDJC	transcript624.chr22.nic	protein_coding	21629308,21629010,21628089	21630053,21629187,21628787	Gene ID= ENSG00000161179.13 TPM= 4.58 Transcript Type= NA
chr22	21628114	21630038	21628114	21630038	-	ENST00000473985.1@YDJC	ENST00000473985.1	protein_coding	21629851,21629308,21629010,21628114	21630038,21629761,21629187,21628787	Gene ID= ENSG00000161179.13 TPM= 2.34 Transcript Type= retained_intron
chr22	21628089	21630031	21628089	21630031	-	ENST00000468686.5@YDJC	ENST00000468686.5	protein_coding	21629308,21628089	21630031,21628787	Gene ID= ENSG00000161179.13 TPM= 1.46 Transcript Type= retained_intron
chr22	21642261	21644298	21642261	21644298	+	ENST00000248958.4@SDF2L1	ENST00000248958.4	protein_coding	21642261,21642862,21643894	21642523,21643058,21644298	Gene ID= ENSG00000128228.4 TPM= 96.91 Transcript Type= protein_coding
chr22	21666022	21697866	21666022	21697866	+	ENST00000626352.2@PPIL2	ENST00000626352.2	protein_coding	21666022,21669913,21670566,21670997,21672330,21675064,21681299,21682437,21683182,21684753,21686483,21686892,21687643,21688073,21688732,21693816,21694593,21694755,21694937,21695398,21696885	21666131,21669962,21670611,21671059,21672381,21675115,21681390,21682526,21683257,21684913,21686558,21686998,21687732,21688106,21688849,21693872,21694665,21694817,21695070,21695496,21697866	Gene ID= ENSG00000100023.18 TPM= 8.76 Transcript Type= protein_coding
chr22	21666009	21700015	21666009	21700015	+	ENST00000335025.12@PPIL2	ENST00000335025.12	protein_coding	21666009,21669913,21670566,21670997,21672330,21675064,21681299,21682437,21683182,21684753,21686483,21686892,21687643,21688073,21688732,21693816,21694593,21694755,21694937,21695394,21696747	21666131,21669962,21670611,21671059,21672381,21675115,21681390,21682526,21683257,21684913,21686558,21686998,21687732,21688106,21688849,21693872,21694665,21694817,21695070,21695496,21700015	Gene ID= ENSG00000100023.18 TPM= 4.09 Transcript Type= protein_coding
chr22	21697544	21735834	21697544	21735834	-	ENST00000339468.7@YPEL1	ENST00000339468.7	protein_coding	21735615,21710628,21703839,21703370,21697544	21735834,21710908,21703882,21703478,21701218	Gene ID= ENSG00000100027.14 TPM= 11.68 Transcript Type= protein_coding
chr22	21760322	21867667	21760322	21867667	-	transcript650.chr22.nnic@MAPK1	transcript650.chr22.nnic	protein_coding	21867322,21807664,21805850,21799012,21788694,21788257,21772873,21769195,21760322	21867667,21807846,21806302,21799128,21788808,21788388,21772982,21769320,21764240	Gene ID= ENSG00000100030.14 TPM= 91.07 Transcript Type= NA
chr22	21769040	21867680	21769040	21867680	-	ENST00000398822.7@MAPK1	ENST00000398822.7	protein_coding	21867322,21807664,21805850,21799012,21788694,21788257,21772873,21769040	21867680,21807846,21806039,21799128,21788808,21788388,21772982,21769320	Gene ID= ENSG00000100030.14 TPM= 15.18 Transcript Type= protein_coding
chr22	21764162	21768004	21764162	21768004	+	transcript661.chr22.nnic@NA	transcript661.chr22.nnic	NA	21764162	21768004	Gene ID= novel_gene_chr22_662 TPM= 3.5 Transcript Type= NA
chr22	21816643	21817857	21816643	21817857	+	transcript657.chr22.nnic@NA	transcript657.chr22.nnic	NA	21816643	21817857	Gene ID= novel_gene_chr22_658 TPM= 2.34 Transcript Type= NA
chr22	21859904	21862376	21859904	21862376	+	transcript659.chr22.nnic@NA	transcript659.chr22.nnic	NA	21859904	21862376	Gene ID= novel_gene_chr22_660 TPM= 3.5 Transcript Type= NA
chr22	21917297	21918753	21917297	21918753	+	transcript676.chr22.nnic@NA	transcript676.chr22.nnic	NA	21917297	21918753	Gene ID= novel_gene_chr22_677 TPM= 2.34 Transcript Type= NA
chr22	21927943	21952865	21927943	21952865	-	transcript673.chr22.nic@PPM1F	transcript673.chr22.nic	protein_coding	21952792,21945843,21939532,21934024,21933391,21927943	21952865,21946108,21939680,21934226,21933579,21931291	Gene ID= ENSG00000100034.13 TPM= 9.34 Transcript Type= NA
chr22	21919420	21952837	21919420	21952837	-	ENST00000263212.9@PPM1F	ENST00000263212.9	protein_coding	21952792,21945843,21939532,21934024,21933391,21931148,21925569,21919420	21952837,21946108,21939680,21934226,21933579,21931291,21925662,21923471	Gene ID= ENSG00000100034.13 TPM= 113.26 Transcript Type= protein_coding
chr22	21957031	21982807	21957031	21982807	-	transcript681.chr22.nic@TOP3B	transcript681.chr22.nic	protein_coding	21982730,21975640,21974357,21972612,21971877,21970980,21970210,21968619,21967603,21965285,21964161,21963923,21962747,21962429,21960321,21959587,21959132,21958492,21957031	21982807,21975807,21974488,21972718,21971951,21971061,21970406,21968775,21967716,21965375,21964315,21964028,21962893,21962602,21960449,21959736,21959232,21958693,21957595	Gene ID= ENSG00000100038.19 TPM= 4.18 Transcript Type= NA
chr22	21957025	21982816	21957025	21982816	-	ENST00000357179.9@TOP3B	ENST00000357179.9	protein_coding	21982730,21975640,21974357,21972612,21971877,21970210,21968619,21967603,21965285,21964161,21963923,21962747,21962429,21960321,21959587,21959132,21958492,21957025	21982816,21975807,21974488,21972718,21971951,21970406,21968775,21967716,21965375,21964315,21964028,21962893,21962602,21960449,21959736,21959232,21958693,21957595	Gene ID= ENSG00000100038.19 TPM= 13.52 Transcript Type= protein_coding
chr22	21957031	21982750	21957031	21982750	-	ENST00000398793.6@TOP3B	ENST00000398793.6	protein_coding	21982414,21975640,21974357,21972612,21971877,21970210,21968619,21967603,21965285,21964161,21963923,21962747,21962429,21960321,21959587,21959132,21958492,21957031	21982750,21975807,21974488,21972718,21971951,21970406,21968775,21967716,21965375,21964315,21964028,21962893,21962602,21960449,21959736,21959232,21958693,21957595	Gene ID= ENSG00000100038.19 TPM= 4.18 Transcript Type= protein_coding
chr22	21957031	21982790	21957031	21982790	-	ENST00000444502.5@TOP3B	ENST00000444502.5	protein_coding	21982730,21975640,21974357,21972612,21971877,21970980,21970210,21968619,21967603,21965285,21964161,21963923,21962747,21962429,21960321,21959132,21957031	21982790,21975807,21974488,21972718,21971951,21971061,21970406,21968775,21967716,21965375,21964315,21964028,21962893,21962602,21960449,21959736,21958693	Gene ID= ENSG00000100038.19 TPM= 8.17 Transcript Type= nonsense_mediated_decay
chr22	21957027	21982790	21957027	21982790	-	ENST00000457179.5@TOP3B	ENST00000457179.5	protein_coding	21982730,21975640,21974357,21972612,21971877,21970980,21970210,21968619,21967603,21965285,21964161,21963923,21962429,21960321,21959587,21959132,21958492,21957027	21982790,21975807,21974488,21972718,21971951,21971061,21970406,21968775,21967716,21965375,21964315,21964028,21962893,21960449,21959736,21959232,21958693,21957595	Gene ID= ENSG00000100038.19 TPM= 1.46 Transcript Type= nonsense_mediated_decay
chr22	22357738	22895830	22357738	22895830	+	transcript733.chr22.nnic@IGLV1-47	transcript733.chr22.nnic	IG_V_gene	22357738,22357956,22734960,22895375	22357840,22358130,22734965,22895830	Gene ID= ENSG00000211648.2 TPM= 4.67 Transcript Type= NA
chr22	22369613	22901437	22369613	22901437	+	transcript742.chr22.nnic@IGLV7-46	transcript742.chr22.nnic	IG_V_gene	22369613,22369783,22899616,22900976	22369693,22370079,22899655,22901437	Gene ID= ENSG00000211649.3 TPM= 6.5 Transcript Type= NA
chr22	22380832	22906799	22380832	22906799	+	transcript748.chr22.nnic@IGLV1-44	transcript748.chr22.nnic	IG_V_gene	22380832,22381041,22904986,22906342	22380925,22381343,22905025,22906799	Gene ID= ENSG00000211651.3 TPM= 4.96 Transcript Type= NA
chr22	22409763	22906799	22409763	22906799	+	transcript754.chr22.nnic@IGLV1-40	transcript754.chr22.nnic	IG_V_gene	22409763,22409973,22904986,22906342	22409862,22410269,22905025,22906799	Gene ID= ENSG00000211653.2 TPM= 29.48 Transcript Type= NA
chr22	22409763	22901437	22409763	22901437	+	transcript757.chr22.nnic@IGLV1-40	transcript757.chr22.nnic	IG_V_gene	22409763,22409973,22899616,22900976	22409862,22410278,22899655,22901437	Gene ID= ENSG00000211653.2 TPM= 12.34 Transcript Type= NA
chr22	22697913	22906799	22697913	22906799	+	transcript721.chr22.nnic@IGLL5	transcript721.chr22.nnic	protein_coding	22697913,22698114,22893797,22895375,22906376	22697996,22698425,22893818,22895408,22906799	Gene ID= ENSG00000254709.7 TPM= 6.04 Transcript Type= NA
chr22	22579799	22901437	22579799	22901437	+	transcript762.chr22.nnic@IGLL5	transcript762.chr22.nnic	protein_coding	22579799,22758904,22899616,22900976	22579887,22759207,22899655,22901437	Gene ID= ENSG00000254709.7 TPM= 5.34 Transcript Type= NA
chr22	22664438	22895825	22664438	22895825	+	transcript768.chr22.nnic@IGLL5	transcript768.chr22.nnic	protein_coding	22664438,22758904,22893773,22895375	22664518,22759203,22893818,22895825	Gene ID= ENSG00000254709.7 TPM= 7.12 Transcript Type= NA
chr22	22664438	22901437	22664438	22901437	+	transcript769.chr22.nnic@IGLL5	transcript769.chr22.nnic	protein_coding	22664438,22758904,22899616,22900976	22664518,22759207,22899655,22901437	Gene ID= ENSG00000254709.7 TPM= 10.01 Transcript Type= NA
chr22	22664438	22906799	22664438	22906799	+	transcript771.chr22.nnic@IGLL5	transcript771.chr22.nnic	protein_coding	22664438,22758904,22904986,22906342	22664518,22759207,22905025,22906799	Gene ID= ENSG00000254709.7 TPM= 6.13 Transcript Type= NA
chr22	22697913	22895825	22697913	22895825	+	transcript781.chr22.nnic@IGLL5	transcript781.chr22.nnic	protein_coding	22697913,22698114,22893773,22895375	22697996,22698410,22893818,22895825	Gene ID= ENSG00000254709.7 TPM= 6.15 Transcript Type= NA
chr22	22697913	22906799	22697913	22906799	+	transcript793.chr22.nnic@IGLL5	transcript793.chr22.nnic	protein_coding	22697913,22758904,22904986,22906342	22697996,22759207,22905025,22906799	Gene ID= ENSG00000254709.7 TPM= 6.13 Transcript Type= NA
chr22	22734586	22895825	22734586	22895825	+	transcript809.chr22.nnic@IGLL5	transcript809.chr22.nnic	protein_coding	22734586,22758904,22893773,22895375	22734665,22759203,22893818,22895825	Gene ID= ENSG00000254709.7 TPM= 5.95 Transcript Type= NA
chr22	22887780	22895825	22887780	22895825	+	ENST00000526893.5@IGLL5	ENST00000526893.5	protein_coding	22887780,22893700,22895375	22888259,22893818,22895825	Gene ID= ENSG00000254709.7 TPM= 1.28 Transcript Type= protein_coding
chr22	22697913	22901437	22697913	22901437	+	transcript783.chr22.nnic@IGLV2-23	transcript783.chr22.nnic	IG_V_gene	22697913,22698114,22899616,22900976	22697996,22698410,22899655,22901437	Gene ID= ENSG00000211660.3 TPM= 6.7 Transcript Type= NA
chr22	22712378	22906799	22712378	22906799	+	transcript798.chr22.nnic@IGLV3-21	transcript798.chr22.nnic	IG_V_gene	22712378,22712899,22904986,22906342	22712464,22713195,22905025,22906799	Gene ID= ENSG00000211662.2 TPM= 20.14 Transcript Type= NA
chr22	22720623	22901437	22720623	22901437	+	transcript802.chr22.nnic@IGLV3-19	transcript802.chr22.nnic	IG_V_gene	22720623,22720855,22899616,22900976	22720708,22721142,22899655,22901437	Gene ID= ENSG00000211663.2 TPM= 5.34 Transcript Type= NA
chr22	22720623	22906799	22720623	22906799	+	transcript804.chr22.nnic@IGLV3-19	transcript804.chr22.nnic	IG_V_gene	22720623,22720855,22904986,22906342	22720708,22721145,22905025,22906799	Gene ID= ENSG00000211663.2 TPM= 7.3 Transcript Type= NA
chr22	22811744	22901437	22811744	22901437	+	transcript815.chr22.nnic@IGLV3-10	transcript815.chr22.nnic	IG_V_gene	22811744,22811981,22899616,22900976	22811827,22812271,22899655,22901437	Gene ID= ENSG00000211669.3 TPM= 5.34 Transcript Type= NA
chr22	22822780	22901437	22822780	22901437	+	transcript823.chr22.nnic@IGLV2-8	transcript823.chr22.nnic	IG_V_gene	22822780,22822982,22899616,22900976	22822866,22823285,22899655,22901437	Gene ID= ENSG00000278196.3 TPM= 41.53 Transcript Type= NA
chr22	22895375	22895834	22895375	22895834	+	ENST00000390321.2@IGLC1	ENST00000390321.2	IG_C_gene	22895375	22895834	Gene ID= ENSG00000211675.2 TPM= 4.67 Transcript Type= IG_C_gene
chr22	22900976	22901437	22900976	22901437	+	ENST00000390323.2@IGLC2	ENST00000390323.2	IG_C_gene	22900976	22901437	Gene ID= ENSG00000211677.2 TPM= 27.44 Transcript Type= IG_C_gene
chr22	22906342	22906803	22906342	22906803	+	ENST00000390325.2@IGLC3	ENST00000390325.2	IG_C_gene	22906342	22906803	Gene ID= ENSG00000211679.2 TPM= 22.18 Transcript Type= IG_C_gene
chr22	22922594	22923034	22922594	22923034	+	ENST00000390331.3@IGLC7	ENST00000390331.3	IG_C_gene	22922594	22923034	Gene ID= ENSG00000211685.3 TPM= 1.17 Transcript Type= IG_C_gene
chr22	23070361	23125037	23070361	23125037	+	ENST00000615612.1@GNAZ	ENST00000615612.1	protein_coding	23070361,23095247,23123087	23070570,23096418,23125037	Gene ID= ENSG00000128266.8 TPM= 5.84 Transcript Type= protein_coding
chr22	23180490	23315950	23180490	23315950	+	transcript862.chr22.nnic@BCR	transcript862.chr22.nnic	protein_coding	23180490,23180841,23253799,23260950,23261355,23268408,23271532,23273081,23273634,23283977,23285033,23287159,23288097,23289517,23290339,23292541,23295024,23309424,23310324,23311697,23312887,23313968,23314552,23315433	23180563,23182239,23253980,23261054,23261540,23268515,23271592,23273133,23273774,23284098,23285201,23287278,23288172,23289621,23290413,23292638,23295155,23309483,23310433,23311836,23313021,23314073,23314714,23315950	Gene ID= ENSG00000186716.20 TPM= 67.14 Transcript Type= NA
chr22	23180210	23318037	23180210	23318037	+	ENST00000305877.12@BCR	ENST00000305877.12	protein_coding	23180210,23253799,23260950,23261355,23268408,23271532,23273081,23273634,23283977,23285033,23287159,23288097,23289517,23290339,23292541,23295024,23309424,23310324,23311697,23312887,23313968,23314552,23315433	23182239,23253980,23261054,23261540,23268515,23271592,23273133,23273774,23284098,23285201,23287278,23288172,23289621,23290413,23292638,23295155,23309483,23310433,23311836,23313021,23314073,23314714,23318037	Gene ID= ENSG00000186716.20 TPM= 63.05 Transcript Type= protein_coding
chr22	23180495	23274931	23180495	23274931	+	transcript874.chr22.nic@BCR	transcript874.chr22.nic	protein_coding	23180495,23253799,23260950,23261355,23268408,23271532,23273081,23273634	23182239,23253980,23261054,23261540,23268515,23271592,23273133,23274931	Gene ID= ENSG00000186716.20 TPM= 11.09 Transcript Type= NA
chr22	23261733	23265926	23261733	23265926	-	transcript879.chr22.nnic@NA	transcript879.chr22.nnic	NA	23261733	23265926	Gene ID= novel_gene_chr22_880 TPM= 7.01 Transcript Type= NA
chr22	23266407	23270620	23266407	23270620	-	transcript881.chr22.nnic@NA	transcript881.chr22.nnic	NA	23266407	23270620	Gene ID= novel_gene_chr22_882 TPM= 2.34 Transcript Type= NA
chr22	23305080	23308343	23305080	23308343	-	transcript883.chr22.nnic@NA	transcript883.chr22.nnic	NA	23305080	23308343	Gene ID= novel_gene_chr22_884 TPM= 2.34 Transcript Type= NA
chr22	23638487	23717302	23638487	23717302	-	transcript890.chr22.nic@GUSBP11	transcript890.chr22.nic	processed_transcript	23717031,23715009,23714187,23709786,23709130,23705429,23694119,23690232,23683725,23659865,23638487	23717302,23715194,23714342,23709867,23709241,23705541,23695517,23690356,23683867,23660000,23638942	Gene ID= ENSG00000228315.11 TPM= 2.34 Transcript Type= NA
chr22	23653169	23694795	23653169	23694795	-	transcript901.chr22.nic@AP000347.2	transcript901.chr22.nic	processed_transcript	23690232,23686838,23659865,23653169	23694795,23686995,23660000,23653352	Gene ID= ENSG00000273000.5 TPM= 2.34 Transcript Type= NA
chr22	23765834	23767981	23765834	23767981	-	transcript905.chr22.nnic@CHCHD10	transcript905.chr22.nnic	protein_coding	23767834,23767374,23766124,23765834	23767981,23767593,23766275,23765979	Gene ID= ENSG00000250479.8 TPM= 4.67 Transcript Type= NA
chr22	23765834	23768443	23765834	23768443	-	ENST00000484558.2@CHCHD10	ENST00000484558.2	protein_coding	23767834,23767374,23766128,23765834	23768443,23767593,23766275,23766026	Gene ID= ENSG00000250479.8 TPM= 29.19 Transcript Type= protein_coding
chr22	23772819	23784316	23772819	23784316	+	ENST00000215743.7@MMP11	ENST00000215743.7	protein_coding	23772819,23779187,23780359,23780582,23780859,23781193,23782226,23783411	23772978,23779416,23780502,23780715,23781100,23781409,23782483,23784316	Gene ID= ENSG00000099953.9 TPM= 5.84 Transcript Type= protein_coding
chr22	23786963	23834516	23786963	23834516	+	ENST00000344921.10@SMARCB1	ENST00000344921.10	protein_coding	23786963,23791756,23793559,23800944,23803295,23816770,23825225,23833572,23834141	23787262,23791867,23793688,23801135,23803422,23816936,23825415,23833703,23834516	Gene ID= ENSG00000099956.18 TPM= 3.12 Transcript Type= protein_coding
chr22	23786994	23834516	23786994	23834516	+	ENST00000407422.7@SMARCB1	ENST00000407422.7	protein_coding	23786994,23791756,23793559,23800944,23803295,23816770,23825225,23833572,23834141	23787262,23791867,23793688,23801081,23803422,23816936,23825415,23833703,23834516	Gene ID= ENSG00000099956.18 TPM= 113.46 Transcript Type= protein_coding
chr22	23786974	23834516	23786974	23834516	+	ENST00000263121.11@SMARCB1	ENST00000263121.11	protein_coding	23786974,23791756,23793559,23800944,23803295,23816770,23825225,23833572,23834141	23787262,23791894,23793688,23801081,23803422,23816936,23825415,23833703,23834516	Gene ID= ENSG00000099956.18 TPM= 102.95 Transcript Type= protein_coding
chr22	23894004	23895226	23894004	23895226	+	ENST00000215754.7@MIF	ENST00000215754.7	protein_coding	23894004,23894772,23895040	23894582,23894944,23895226	Gene ID= ENSG00000240972.1 TPM= 171.64 Transcript Type= protein_coding
chr22	23914245	23917771	23914245	23917771	+	transcript935.chr22.nnic@NA	transcript935.chr22.nnic	NA	23914245	23917771	Gene ID= novel_gene_chr22_936 TPM= 4.67 Transcript Type= NA
chr22	23957414	23961186	23957414	23961186	-	ENST00000290765.8@GSTT2B	ENST00000290765.8	protein_coding	23961020,23960294,23958551,23958285,23957414	23961186,23960381,23958701,23958458,23957932	Gene ID= ENSG00000133433.10 TPM= 7.01 Transcript Type= protein_coding
chr22	23971365	23974584	23971365	23974584	-	ENST00000398344.8@DDT	ENST00000398344.8	protein_coding	23974307,23973768,23971365	23974584,23973943,23971623	Gene ID= ENSG00000099977.13 TPM= 218.34 Transcript Type= protein_coding
chr22	24011363	24067602	24011363	24067602	+	transcript948.chr22.nic@CABIN1	transcript948.chr22.nic	protein_coding	24011363,24035444,24036089,24038348,24041139,24042904,24049091,24050825,24054873,24056192,24059227,24059924,24061947,24062959,24064035,24066987	24011728,24035520,24036181,24038461,24041273,24043084,24049220,24050974,24055159,24056360,24059363,24060141,24062025,24063146,24064187,24067602	Gene ID= ENSG00000099991.17 TPM= 4.67 Transcript Type= NA
chr22	24155921	24178627	24155921	24178627	+	transcript953.chr22.nic@CABIN1	transcript953.chr22.nic	protein_coding	24155921,24164400,24165530,24166639,24168447,24171713,24176111,24177504,24178053	24156076,24164563,24165626,24167313,24168521,24171995,24176275,24177817,24178627	Gene ID= ENSG00000099991.17 TPM= 21.4 Transcript Type= NA
chr22	24155802	24178627	24155802	24178627	+	transcript954.chr22.nnic@CABIN1	transcript954.chr22.nnic	protein_coding	24155802,24164400,24165530,24166639,24168447,24171713,24176111,24177591,24178053	24156076,24164563,24165626,24167313,24168521,24171995,24176275,24177817,24178627	Gene ID= ENSG00000099991.17 TPM= 7.97 Transcript Type= NA
chr22	24174314	24178627	24174314	24178627	+	transcript955.chr22.nic@CABIN1	transcript955.chr22.nic	protein_coding	24174314,24177504,24178053	24176275,24177817,24178627	Gene ID= ENSG00000099991.17 TPM= 4.09 Transcript Type= NA
chr22	24176561	24178627	24176561	24178627	+	transcript957.chr22.nic@CABIN1	transcript957.chr22.nic	protein_coding	24176561,24178053	24177817,24178627	Gene ID= ENSG00000099991.17 TPM= 5.06 Transcript Type= NA
chr22	24181259	24189110	24181259	24189110	+	ENST00000358321.3@SUSD2	ENST00000358321.3	protein_coding	24181259,24183057,24183495,24184136,24184766,24185094,24185486,24185661,24186016,24186257,24187202,24187571,24187959,24188225,24188412	24181595,24183267,24183646,24184303,24184940,24185295,24185571,24185929,24186159,24186415,24187450,24187843,24188135,24188327,24189110	Gene ID= ENSG00000099994.10 TPM= 494.34 Transcript Type= protein_coding
chr22	24181449	24189106	24181449	24189106	+	transcript973.chr22.nnic@SUSD2	transcript973.chr22.nnic	protein_coding	24181449,24183057,24183495,24184136,24184766,24185094,24185486,24185661,24186016,24186257,24187202,24187571,24187959,24188412	24181595,24183267,24183646,24184303,24184940,24185295,24185571,24185929,24186159,24186415,24187450,24187843,24188135,24189106	Gene ID= ENSG00000099994.10 TPM= 28.28 Transcript Type= NA
chr22	24188547	24191986	24188547	24191986	+	transcript983.chr22.nnic@NA	transcript983.chr22.nnic	NA	24188547	24191986	Gene ID= novel_gene_chr22_984 TPM= 8.17 Transcript Type= NA
chr22	24219660	24245137	24219660	24245137	-	transcript988.chr22.nic@GGT5	transcript988.chr22.nic	protein_coding	24244553,24233874,24233498,24232823,24232051,24231384,24226631,24226076,24225546,24225245,24224996,24220492,24219660	24245137,24234004,24233593,24233018,24232208,24231530,24226767,24226266,24225652,24225411,24225106,24220584,24220116	Gene ID= ENSG00000099998.17 TPM= 19.27 Transcript Type= NA
chr22	24219660	24245082	24219660	24245082	-	transcript992.chr22.nic@GGT5	transcript992.chr22.nic	protein_coding	24244553,24233874,24232823,24232051,24231384,24226631,24226076,24225546,24225245,24224996,24220492,24219660	24245082,24234004,24233018,24232208,24231530,24226767,24226266,24225652,24225411,24225106,24220584,24220116	Gene ID= ENSG00000099998.17 TPM= 9.92 Transcript Type= NA
chr22	24219654	24245078	24219654	24245078	-	ENST00000263112.11@GGT5	ENST00000263112.11	protein_coding	24244553,24233874,24232823,24232051,24231384,24226631,24226076,24225546,24225245,24224996,24219654	24245078,24234004,24233018,24232208,24231530,24226767,24226266,24225652,24225411,24225106,24220116	Gene ID= ENSG00000099998.17 TPM= 28.02 Transcript Type= protein_coding
chr22	24270831	24417253	24270831	24417253	+	transcript1026.chr22.nnic@SPECC1L	transcript1026.chr22.nnic	protein_coding	24270831,24276700,24302195,24313313,24321288,24321405,24324220,24328846,24330256,24334410,24338386,24347086,24363261,24365476,24369218,24411588,24412648,24414534	24270983,24276803,24302384,24313466,24321323,24322918,24324427,24328919,24330431,24334573,24338477,24347176,24363344,24365632,24369320,24411704,24412707,24417253	Gene ID= ENSG00000100014.19 TPM= 3.39 Transcript Type= NA
chr22	24270816	24417253	24270816	24417253	+	transcript1028.chr22.nnic@SPECC1L	transcript1028.chr22.nnic	protein_coding	24270816,24302195,24313313,24321288,24321405,24324220,24328846,24330256,24334410,24338386,24347086,24363261,24365476,24369218,24411588,24412648,24414534	24270983,24302384,24313466,24321323,24322918,24324427,24328919,24330431,24334573,24338477,24347176,24363344,24365632,24369320,24411704,24412707,24417253	Gene ID= ENSG00000100014.19 TPM= 3.39 Transcript Type= NA
chr22	24270816	24417253	24270816	24417253	+	transcript1032.chr22.nic@SPECC1L	transcript1032.chr22.nic	protein_coding	24270816,24302195,24313313,24321288,24324220,24328846,24330256,24334410,24338386,24347086,24363261,24365476,24369218,24411588,24412648,24414534	24270983,24302384,24313466,24321323,24324427,24328919,24330431,24334573,24338477,24347176,24363344,24365632,24369320,24411704,24412707,24417253	Gene ID= ENSG00000100014.19 TPM= 2.8 Transcript Type= NA
chr22	24270817	24417739	24270817	24417739	+	ENST00000437398.5@SPECC1L	ENST00000437398.5	protein_coding	24270817,24302195,24313313,24321288,24324220,24328846,24330256,24334410,24338386,24347086,24363261,24365476,24369218,24411588,24412648,24414534	24270983,24302384,24313466,24322918,24324427,24328919,24330431,24334573,24338477,24347176,24363344,24365632,24369320,24411704,24412707,24417739	Gene ID= ENSG00000100014.19 TPM= 33.16 Transcript Type= protein_coding
chr22	24270840	24417740	24270840	24417740	+	ENST00000314328.13@SPECC1L	ENST00000314328.13	protein_coding	24270840,24276700,24302195,24313313,24321288,24324220,24328846,24330256,24334410,24338386,24347086,24363261,24365476,24369218,24411588,24412648,24414534	24270983,24276803,24302384,24313466,24322918,24324427,24328919,24330431,24334573,24338477,24347176,24363344,24365632,24369320,24411704,24412707,24417740	Gene ID= ENSG00000100014.19 TPM= 5.14 Transcript Type= protein_coding
chr22	24423597	24442356	24423597	24442356	+	ENST00000611543.4@ADORA2A	ENST00000611543.4	protein_coding	24423597,24433131,24440583	24423628,24433736,24442356	Gene ID= ENSG00000128271.21 TPM= 11.29 Transcript Type= protein_coding
chr22	24423618	24442356	24423618	24442356	+	transcript1051.chr22.nic@ADORA2A	transcript1051.chr22.nic	protein_coding	24423618,24433131,24440583	24423957,24433736,24442356	Gene ID= ENSG00000128271.21 TPM= 48.65 Transcript Type= NA
chr22	24427562	24442360	24427562	24442360	+	ENST00000337539.11@ADORA2A	ENST00000337539.11	protein_coding	24427562,24433131,24440583	24427746,24433736,24442360	Gene ID= ENSG00000128271.21 TPM= 10.12 Transcript Type= protein_coding
chr22	24540438	24555165	24540438	24555165	-	transcript1091.chr22.nnic@GUCD1	transcript1091.chr22.nnic	protein_coding	24554949,24548917,24547908,24546914,24543842,24540438	24555165,24549001,24548073,24547005,24543954,24543097	Gene ID= ENSG00000138867.16 TPM= 17.42 Transcript Type= NA
chr22	24540438	24555316	24540438	24555316	-	ENST00000435822.5@GUCD1	ENST00000435822.5	protein_coding	24554949,24548917,24547908,24546914,24543842,24540438	24555316,24549001,24548073,24547005,24544083,24543097	Gene ID= ENSG00000138867.16 TPM= 160.45 Transcript Type= protein_coding
chr22	24540423	24555935	24540423	24555935	-	ENST00000621833.4@GUCD1	ENST00000621833.4	protein_coding	24555615,24548917,24547908,24546914,24543842,24540423	24555935,24549001,24548073,24547005,24544083,24543100	Gene ID= ENSG00000138867.16 TPM= 24.81 Transcript Type= protein_coding
chr22	24555503	24572772	24555503	24572772	+	ENST00000215829.7@SNRPD3	ENST00000215829.7	protein_coding	24555503,24557657,24567984,24571916	24556071,24557800,24568176,24572772	Gene ID= ENSG00000100028.11 TPM= 2.34 Transcript Type= protein_coding
chr22	24594783	24629002	24594783	24629002	+	transcript1060.chr22.nic@GGT1	transcript1060.chr22.nic	protein_coding	24594783,24607954,24609965,24610358,24611075,24614776,24615041,24620328,24620913,24623107,24623780,24627432,24627852,24628081,24628275,24628693	24594886,24608023,24610033,24610531,24611245,24614906,24615127,24620520,24621070,24623256,24623916,24627619,24627979,24628193,24628388,24629002	Gene ID= ENSG00000100031.18 TPM= 5.51 Transcript Type= NA
chr22	24603172	24629002	24603172	24629002	+	transcript1064.chr22.nic@GGT1	transcript1064.chr22.nic	protein_coding	24603172,24607954,24609965,24610250,24611075,24614776,24615041,24620328,24620913,24623107,24623780,24627432,24627852,24628081,24628275,24628693	24603321,24608023,24610033,24610531,24611245,24614906,24615127,24620520,24621070,24623256,24623916,24627619,24627979,24628193,24628388,24629002	Gene ID= ENSG00000100031.18 TPM= 11.35 Transcript Type= NA
chr22	24603172	24629002	24603172	24629002	+	transcript1065.chr22.nic@GGT1	transcript1065.chr22.nic	protein_coding	24603172,24607954,24609965,24610358,24611075,24614776,24615041,24620328,24620913,24623107,24623780,24627432,24627852,24628081,24628275,24628693	24603321,24608023,24610033,24610531,24611245,24614906,24615127,24620520,24621070,24623256,24623916,24627619,24627979,24628193,24628388,24629002	Gene ID= ENSG00000100031.18 TPM= 16.02 Transcript Type= NA
chr22	24603172	24629002	24603172	24629002	+	transcript1067.chr22.nic@GGT1	transcript1067.chr22.nic	protein_coding	24603172,24607954,24609965,24610358,24611075,24614776,24615041,24620328,24620913,24623107,24623780,24627432,24627852,24628081,24628275,24628693	24603527,24608023,24610033,24610531,24611245,24614906,24615127,24620520,24621070,24623256,24623916,24627619,24627979,24628193,24628388,24629002	Gene ID= ENSG00000100031.18 TPM= 7.85 Transcript Type= NA
chr22	24603172	24629002	24603172	24629002	+	transcript1074.chr22.nic@GGT1	transcript1074.chr22.nic	protein_coding	24603172,24607954,24610358,24611075,24614776,24615041,24620328,24620913,24623107,24623780,24627432,24627852,24628081,24628275,24628693	24603321,24608023,24610531,24611245,24614906,24615127,24620520,24621070,24623256,24623916,24627619,24627979,24628193,24628388,24629002	Gene ID= ENSG00000100031.18 TPM= 5.51 Transcript Type= NA
chr22	24603201	24629002	24603201	24629002	+	ENST00000400382.5@GGT1	ENST00000400382.5	protein_coding	24603201,24607954,24609965,24610250,24611075,24614776,24615041,24620328,24620913,24623107,24623780,24627432,24627852,24628081,24628275,24628693	24603527,24608023,24610033,24610531,24611245,24614906,24615127,24620520,24621070,24623256,24623916,24627619,24627979,24628193,24628388,24629002	Gene ID= ENSG00000100031.18 TPM= 9.01 Transcript Type= protein_coding
chr22	24627180	24628996	24627180	24628996	+	ENST00000401885.5@GGT1	ENST00000401885.5	protein_coding	24627180,24627410,24627852,24628081,24628275,24628693	24627278,24627619,24627979,24628193,24628388,24628996	Gene ID= ENSG00000100031.18 TPM= 15.4 Transcript Type= protein_coding
chr22	24627255	24629005	24627255	24629005	+	ENST00000403838.5@GGT1	ENST00000403838.5	protein_coding	24627255,24627852,24628081,24628275,24628693	24627619,24627979,24628193,24628388,24629005	Gene ID= ENSG00000100031.18 TPM= 82.07 Transcript Type= protein_coding
chr22	24585635	24593124	24585635	24593124	-	transcript1096.chr22.nic@LRRC75B	transcript1096.chr22.nic	protein_coding	24592863,24592217,24589821,24588679,24588214,24585635	24593124,24592423,24589949,24589265,24588329,24586411	Gene ID= ENSG00000178026.12 TPM= 5.25 Transcript Type= NA
chr22	24585635	24593030	24585635	24593030	-	transcript1097.chr22.nnic@LRRC75B	transcript1097.chr22.nnic	protein_coding	24592644,24592217,24589821,24589156,24588214,24585635	24593030,24592423,24589949,24589265,24588329,24586411	Gene ID= ENSG00000178026.12 TPM= 2.34 Transcript Type= NA
chr22	24585635	24593105	24585635	24593105	-	transcript1110.chr22.nic@LRRC75B	transcript1110.chr22.nic	protein_coding	24592217,24589821,24588679,24588214,24585635	24593105,24589949,24589265,24588329,24586411	Gene ID= ENSG00000178026.12 TPM= 5.25 Transcript Type= NA
chr22	24585635	24593095	24585635	24593095	-	transcript1123.chr22.nic@LRRC75B	transcript1123.chr22.nic	protein_coding	24592863,24588679,24588214,24585635	24593095,24589949,24588329,24586411	Gene ID= ENSG00000178026.12 TPM= 3.5 Transcript Type= NA
chr22	24585635	24593095	24585635	24593095	-	transcript1128.chr22.nic@LRRC75B	transcript1128.chr22.nic	protein_coding	24592863,24588214,24585635	24593095,24589949,24586411	Gene ID= ENSG00000178026.12 TPM= 8.17 Transcript Type= NA
chr22	24585620	24593066	24585620	24593066	-	ENST00000446942.5@LRRC75B	ENST00000446942.5	protein_coding	24592863,24589821,24588679,24588214,24585620	24593066,24589949,24589265,24588329,24586411	Gene ID= ENSG00000178026.12 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr22	24585620	24593063	24585620	24593063	-	ENST00000318753.12@LRRC75B	ENST00000318753.12	protein_coding	24592863,24589821,24588214,24585620	24593063,24589949,24588329,24586411	Gene ID= ENSG00000178026.12 TPM= 2.34 Transcript Type= protein_coding
chr22	24691122	24696003	24691122	24696003	-	ENST00000633827.1@AP000357.2	ENST00000633827.1	lincRNA	24695847,24691122	24696003,24691561	Gene ID= ENSG00000282012.1 TPM= 24.52 Transcript Type= lincRNA
chr22	25069969	25197448	25069969	25197448	+	ENST00000401395.1@KIAA1671	ENST00000401395.1	protein_coding	25069969,25170820,25174240,25177348,25181699,25184977,25190702,25192406	25070416,25170938,25174489,25177522,25181823,25185119,25190784,25197448	Gene ID= ENSG00000197077.13 TPM= 23.35 Transcript Type= protein_coding
chr22	25000493	25003242	25000493	25003242	+	transcript1139.chr22.nnic@NA	transcript1139.chr22.nnic	NA	25000493	25003242	Gene ID= novel_gene_chr22_1140 TPM= 2.34 Transcript Type= NA
chr22	25351462	25405413	25351462	25405413	-	transcript1143.chr22.nic@LRP5L	transcript1143.chr22.nic	protein_coding	25405202,25381381,25375813,25359827,25357255,25354596,25351462	25405413,25381578,25376008,25360223,25357426,25354812,25351902	Gene ID= ENSG00000100068.11 TPM= 3.5 Transcript Type= NA
chr22	25351457	25405377	25351457	25405377	-	ENST00000444995.7@LRP5L	ENST00000444995.7	protein_coding	25405202,25381381,25375813,25359827,25357255,25354596,25351457	25405377,25381578,25376008,25360223,25357426,25354812,25351814	Gene ID= ENSG00000100068.11 TPM= 2.34 Transcript Type= protein_coding
chr22	25448085	25459681	25448085	25459681	+	transcript1155.chr22.nnic@CRYBB2P1	transcript1155.chr22.nnic	transcribed_unprocessed_pseudogene	25448085,25453316,25455712,25457259,25459416	25448284,25453434,25455840,25457401,25459681	Gene ID= ENSG00000100058.12 TPM= 5.84 Transcript Type= NA
chr22	25448085	25459681	25448085	25459681	+	transcript1159.chr22.nic@CRYBB2P1	transcript1159.chr22.nic	transcribed_unprocessed_pseudogene	25448085,25455712,25457259,25459416	25448284,25455840,25457401,25459681	Gene ID= ENSG00000100058.12 TPM= 4.67 Transcript Type= NA
chr22	25448105	25461678	25448105	25461678	+	ENST00000382734.9@CRYBB2P1	ENST00000382734.9	transcribed_unprocessed_pseudogene	25448105,25455712,25457259,25459416,25460867	25448284,25455840,25457401,25459515,25461678	Gene ID= ENSG00000100058.12 TPM= 3.5 Transcript Type= processed_transcript
chr22	25564849	25729294	25564849	25729294	+	ENST00000324198.10@GRK3	ENST00000324198.10	protein_coding	25564849,25604377,25644592,25661576,25663630,25667739,25672296,25674437,25678816,25685170,25687537,25690189,25695107,25703510,25704109,25709898,25711068,25714408,25718245,25721284,25722289	25565153,25604453,25644665,25661677,25663704,25667800,25672347,25674528,25678915,25685248,25687667,25690283,25695214,25703576,25704209,25709964,25711163,25714570,25718381,25721397,25729294	Gene ID= ENSG00000100077.14 TPM= 8.17 Transcript Type= protein_coding
chr22	26429273	26445015	26429273	26445015	+	ENST00000215906.5@ASPHD2	ENST00000215906.5	protein_coding	26429273,26433392,26442459,26443097	26429486,26434501,26442572,26445015	Gene ID= ENSG00000128203.6 TPM= 3.5 Transcript Type= protein_coding
chr22	26452083	26483795	26452083	26483795	-	ENST00000336873.9@HPS4	ENST00000336873.9	protein_coding	26483765,26481722,26479265,26476993,26472832,26472302,26470719,26468551,26466226,26465455,26463917,26458445,26457859,26452083	26483795,26482240,26479355,26477136,26472939,26472418,26470813,26468623,26466262,26465551,26464826,26458577,26457967,26453404	Gene ID= ENSG00000100099.20 TPM= 28.02 Transcript Type= protein_coding
chr22	26483877	26494658	26483877	26494658	+	ENST00000215917.11@SRRD	ENST00000215917.11	protein_coding	26483877,26486023,26488029,26488390,26490044,26491025,26491463	26484099,26486063,26488288,26488488,26490198,26491070,26494658	Gene ID= ENSG00000100104.13 TPM= 15.18 Transcript Type= protein_coding
chr22	26491927	26512499	26491927	26512499	-	transcript1183.chr22.nic@TFIP11	transcript1183.chr22.nic	protein_coding	26512394,26512099,26511119,26510617,26510064,26506775,26506303,26503666,26501900,26499104,26498869,26496721,26496073,26494797,26494139,26491927	26512499,26512175,26511317,26510702,26510281,26506928,26506459,26503793,26502052,26499631,26498975,26496889,26496316,26494939,26494304,26492368	Gene ID= ENSG00000100109.16 TPM= 8.17 Transcript Type= NA
chr22	26491225	26512505	26491225	26512505	-	ENST00000407690.5@TFIP11	ENST00000407690.5	protein_coding	26512394,26512099,26510617,26510064,26506775,26506303,26503666,26501900,26499104,26498869,26496721,26496073,26494797,26494139,26491225	26512505,26512175,26510702,26510281,26506928,26506459,26503793,26502052,26499631,26498975,26496889,26496316,26494939,26494304,26492368	Gene ID= ENSG00000100109.16 TPM= 89.9 Transcript Type= protein_coding
chr22	26491927	26512496	26491927	26512496	-	ENST00000407148.5@TFIP11	ENST00000407148.5	protein_coding	26512394,26512099,26510064,26506775,26506303,26503666,26501900,26499104,26498869,26496721,26496073,26494797,26494139,26491927	26512496,26512175,26510281,26506928,26506459,26503793,26502052,26499631,26498975,26496889,26496316,26494939,26494304,26492368	Gene ID= ENSG00000100109.16 TPM= 7.01 Transcript Type= protein_coding
chr22	26512537	26514568	26512537	26514568	+	ENST00000566814.1@Z95115.1	ENST00000566814.1	antisense_RNA	26512537	26514568	Gene ID= ENSG00000261188.1 TPM= 1.17 Transcript Type= antisense_RNA
chr22	26521983	26590163	26521983	26590163	-	ENST00000338754.8@TPST2	ENST00000338754.8	protein_coding	26590053,26544604,26540789,26536288,26532695,26528214,26521983	26590163,26544675,26541718,26536486,26532745,26528262,26526267	Gene ID= ENSG00000128294.15 TPM= 20.34 Transcript Type= protein_coding
chr22	26525746	26590136	26525746	26590136	-	transcript1235.chr22.nic@TPST2	transcript1235.chr22.nic	protein_coding	26590053,26540789,26536288,26532695,26528214,26525746	26590136,26541718,26536486,26532745,26528262,26526267	Gene ID= ENSG00000128294.15 TPM= 11 Transcript Type= NA
chr22	26528777	26530640	26528777	26530640	+	transcript1242.chr22.nnic@NA	transcript1242.chr22.nnic	NA	26528777	26530640	Gene ID= novel_gene_chr22_1243 TPM= 2.34 Transcript Type= NA
chr22	26599278	26618088	26599278	26618088	-	ENST00000215939.2@CRYBB1	ENST00000215939.2	protein_coding	26617977,26616140,26612072,26607889,26601879,26599278	26618088,26616338,26612190,26608021,26602021,26599673	Gene ID= ENSG00000100122.5 TPM= 1.17 Transcript Type= protein_coding
chr22	26779474	26784218	26779474	26784218	-	transcript1257.chr22.nnic@NA	transcript1257.chr22.nnic	NA	26779474	26784218	Gene ID= novel_gene_chr22_1258 TPM= 2.34 Transcript Type= NA
chr22	26785095	26788372	26785095	26788372	-	transcript1259.chr22.nnic@NA	transcript1259.chr22.nnic	NA	26785095	26788372	Gene ID= novel_gene_chr22_1260 TPM= 2.34 Transcript Type= NA
chr22	27748277	27801498	27748277	27801498	-	ENST00000302326.4@MN1	ENST00000302326.4	protein_coding	27796763,27748277	27801498,27751096	Gene ID= ENSG00000169184.5 TPM= 14.01 Transcript Type= protein_coding
chr22	27851669	27919268	27851669	27919268	-	ENST00000335272.9@PITPNB	ENST00000335272.9	protein_coding	27919172,27914317,27910964,27897801,27897130,27896552,27894555,27873738,27860131,27858387,27854854,27851669	27919268,27914347,27911109,27897892,27897137,27896626,27894638,27873815,27860241,27858509,27854939,27853663	Gene ID= ENSG00000180957.17 TPM= 122.6 Transcript Type= protein_coding
chr22	27851670	27919255	27851670	27919255	-	ENST00000320996.14@PITPNB	ENST00000320996.14	protein_coding	27919172,27914317,27910964,27897801,27897130,27896552,27894555,27873738,27860131,27858387,27851670	27919255,27914347,27911109,27897892,27897137,27896626,27894638,27873815,27860241,27858509,27853663	Gene ID= ENSG00000180957.17 TPM= 3.5 Transcript Type= protein_coding
chr22	27919470	27924963	27919470	27924963	+	ENST00000437713.5@TTC28-AS1	ENST00000437713.5	processed_transcript	27919470,27922018,27924347	27919545,27922178,27924963	Gene ID= ENSG00000235954.6 TPM= 1.17 Transcript Type= antisense_RNA
chr22	28146304	28150036	28146304	28150036	+	transcript1289.chr22.nnic@NA	transcript1289.chr22.nnic	NA	28146304	28150036	Gene ID= novel_gene_chr22_1290 TPM= 2.34 Transcript Type= NA
chr22	28687744	28741844	28687744	28741844	-	ENST00000328354.10@CHEK2	ENST00000328354.10	protein_coding	28741769,28734403,28725243,28724977,28719395,28711909,28710006,28703505,28699838,28696901,28695710,28695127,28694032,28689135,28687744	28741844,28734727,28725367,28725124,28719485,28712017,28710059,28703566,28699937,28696987,28695873,28695242,28694117,28689215,28687986	Gene ID= ENSG00000183765.20 TPM= 3.5 Transcript Type= protein_coding
chr22	28687763	28741838	28687763	28741838	-	ENST00000382580.6@CHEK2	ENST00000382580.6	protein_coding	28741769,28734403,28730420,28725243,28724977,28719395,28711909,28710006,28703505,28699838,28696901,28695710,28695127,28694032,28689135,28687763	28741838,28734727,28730548,28725367,28725124,28719485,28712017,28710059,28703566,28699937,28696987,28695873,28695242,28694117,28689215,28687986	Gene ID= ENSG00000183765.20 TPM= 1.17 Transcript Type= protein_coding
chr22	28742031	28757510	28742031	28757510	+	ENST00000216027.7@HSCB	ENST00000216027.7	protein_coding	28742031,28743882,28744615,28745864,28751241,28757078	28742331,28743978,28744704,28746008,28751288,28757510	Gene ID= ENSG00000100209.9 TPM= 5.84 Transcript Type= protein_coding
chr22	28742063	28757510	28742063	28757510	+	transcript1304.chr22.nnic@HSCB	transcript1304.chr22.nnic	protein_coding	28742063,28751241,28757078	28742331,28751288,28757510	Gene ID= ENSG00000100209.9 TPM= 2.34 Transcript Type= NA
chr22	28742055	28757515	28742055	28757515	+	ENST00000398941.6@HSCB	ENST00000398941.6	protein_coding	28742055,28743882,28744615,28751241,28757078	28742331,28743978,28744709,28751288,28757515	Gene ID= ENSG00000100209.9 TPM= 1.17 Transcript Type= protein_coding
chr22	28742061	28757213	28742061	28757213	+	ENST00000420442.5@HSCB	ENST00000420442.5	protein_coding	28742061,28743882,28744615,28745864,28751241,28757078	28742331,28743978,28744709,28746008,28751288,28757213	Gene ID= ENSG00000100209.9 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr22	28772674	28789295	28772674	28789295	+	ENST00000249064.8@CCDC117	ENST00000249064.8	protein_coding	28772674,28773725,28780948,28783508,28786089	28773034,28773778,28781172,28783645,28789295	Gene ID= ENSG00000159873.9 TPM= 47.29 Transcript Type= protein_coding
chr22	28772758	28793500	28772758	28793500	+	transcript1308.chr22.nnic@CCDC117	transcript1308.chr22.nnic	protein_coding	28772758,28773725,28780948,28783508,28792588	28773034,28773778,28781172,28783645,28793500	Gene ID= ENSG00000159873.9 TPM= 2.34 Transcript Type= NA
chr22	28772674	28789301	28772674	28789301	+	ENST00000421503.6@CCDC117	ENST00000421503.6	protein_coding	28772674,28773725,28783508,28786089	28773034,28773778,28783645,28789301	Gene ID= ENSG00000159873.9 TPM= 2.92 Transcript Type= protein_coding
chr22	28794555	28800597	28794555	28800597	-	ENST00000216037.10@XBP1	ENST00000216037.10	protein_coding	28800298,28799057,28797077,28796047,28794555	28800597,28799153,28797205,28796192,28795732	Gene ID= ENSG00000100219.16 TPM= 694.13 Transcript Type= protein_coding
chr22	28794557	28800558	28794557	28800558	-	ENST00000403532.7@XBP1	ENST00000403532.7	protein_coding	28800298,28799042,28797077,28796047,28794557	28800558,28799153,28797205,28796192,28795732	Gene ID= ENSG00000100219.16 TPM= 14.01 Transcript Type= protein_coding
chr22	28883551	29054020	28883551	29054020	+	transcript1319.chr22.nnic@ZNRF3	transcript1319.chr22.nnic	protein_coding	28883551,28987076,29042420,29043299,29044780,29046716,29048389,29049197,29053579	28884066,28987201,29042569,29043430,29044890,29046883,29048491,29050948,29054020	Gene ID= ENSG00000183579.15 TPM= 4.67 Transcript Type= NA
chr22	28883551	28991308	28883551	28991308	+	transcript1327.chr22.nic@ZNRF3	transcript1327.chr22.nic	protein_coding	28883551,28987076	28884066,28991308	Gene ID= ENSG00000183579.15 TPM= 3.5 Transcript Type= NA
chr22	28883592	29057487	28883592	29057487	+	ENST00000544604.6@ZNRF3	ENST00000544604.6	protein_coding	28883592,28987076,29042495,29043299,29044780,29046716,29048389,29049197,29053579	28884066,28987201,29042569,29043430,29044890,29046883,29048491,29050948,29057487	Gene ID= ENSG00000183579.15 TPM= 25.69 Transcript Type= protein_coding
chr22	29073000	29146820	29073000	29146820	+	transcript1331.chr22.nic@KREMEN1	transcript1331.chr22.nic	protein_coding	29073000,29094258,29098862,29121357,29125263,29137342,29138624,29140282,29141944	29073227,29094420,29098953,29121481,29125416,29137674,29138833,29140366,29146820	Gene ID= ENSG00000183762.12 TPM= 3.5 Transcript Type= NA
chr22	29073078	29146820	29073078	29146820	+	ENST00000400335.8@KREMEN1	ENST00000400335.8	protein_coding	29073078,29094258,29098862,29121357,29125263,29137342,29138624,29140282,29141944	29073227,29094420,29098953,29121481,29125416,29137674,29138782,29140366,29146820	Gene ID= ENSG00000183762.12 TPM= 32.69 Transcript Type= protein_coding
chr22	29180268	29205833	29180268	29205833	-	transcript1362.chr22.nnic@RNU6-1219P	transcript1362.chr22.nnic	snRNA	29205471,29205160,29186197,29183172,29181703,29180268	29205833,29205321,29186265,29183381,29181847,29180663	Gene ID= ENSG00000251952.1 TPM= 2.34 Transcript Type= NA
chr22	29178731	29205980	29178731	29205980	-	transcript1368.chr22.nnic@RNU6-1219P	transcript1368.chr22.nnic	snRNA	29205471,29205160,29186197,29183172,29178731	29205980,29205321,29186265,29183381,29180663	Gene ID= ENSG00000251952.1 TPM= 5.84 Transcript Type= NA
chr22	29180268	29205831	29180268	29205831	-	transcript1370.chr22.nnic@RNU6-1219P	transcript1370.chr22.nnic	snRNA	29205471,29205160,29183172,29181703,29180268	29205831,29205321,29183381,29181847,29180663	Gene ID= ENSG00000251952.1 TPM= 2.34 Transcript Type= NA
chr22	29205908	29259597	29205908	29259597	+	transcript1337.chr22.nic@EMID1	transcript1337.chr22.nic	protein_coding	29205908,29214926,29215527,29225133,29226490,29231020,29231593,29232256,29233379,29233614,29234137,29234305,29243445,29254203,29255271,29258817	29206139,29215039,29215630,29225216,29226551,29231140,29231682,29232402,29233468,29233666,29234199,29234349,29243489,29254287,29255361,29259597	Gene ID= ENSG00000186998.15 TPM= 10.71 Transcript Type= NA
chr22	29205926	29259597	29205926	29259597	+	transcript1345.chr22.nnic@EMID1	transcript1345.chr22.nnic	protein_coding	29205926,29214926,29215527,29225133,29226490,29231020,29231593,29232256,29233379,29233614,29234137,29234305,29243445,29258817	29206139,29215039,29215630,29225216,29226551,29231140,29231682,29232402,29233468,29233666,29234199,29234349,29243489,29259597	Gene ID= ENSG00000186998.15 TPM= 3.7 Transcript Type= NA
chr22	29205954	29259597	29205954	29259597	+	transcript1349.chr22.nnic@EMID1	transcript1349.chr22.nnic	protein_coding	29205954,29214926,29225133,29226490,29231020,29231593,29232256,29233379,29233614,29234137,29234305,29243445,29254203,29258817	29206139,29215039,29225216,29226551,29231140,29231682,29232402,29233468,29233666,29234199,29234349,29243489,29254287,29259597	Gene ID= ENSG00000186998.15 TPM= 3.3 Transcript Type= NA
chr22	29205909	29259597	29205909	29259597	+	transcript1353.chr22.nnic@EMID1	transcript1353.chr22.nnic	protein_coding	29205909,29225133,29226490,29231020,29231593,29232256,29233379,29233614,29234137,29234305,29243445,29254203,29258817	29206139,29225216,29226551,29231140,29231682,29232402,29233468,29233666,29234199,29234349,29243489,29254287,29259597	Gene ID= ENSG00000186998.15 TPM= 3.3 Transcript Type= NA
chr22	29205912	29259597	29205912	29259597	+	ENST00000404820.7@EMID1	ENST00000404820.7	protein_coding	29205912,29214926,29215527,29225133,29226490,29231020,29231593,29232256,29233379,29233614,29234137,29234305,29243445,29255271,29258817	29206139,29215039,29215630,29225216,29226551,29231140,29231682,29232402,29233468,29233666,29234199,29234349,29243489,29255361,29259597	Gene ID= ENSG00000186998.15 TPM= 22.38 Transcript Type= protein_coding
chr22	29205851	29259597	29205851	29259597	+	ENST00000334018.10@EMID1	ENST00000334018.10	protein_coding	29205851,29214926,29215527,29225133,29226490,29231020,29231593,29232256,29233379,29233614,29234137,29234305,29243445,29254203,29258817	29206139,29215039,29215630,29225216,29226551,29231140,29231682,29232402,29233468,29233666,29234199,29234349,29243489,29254287,29259597	Gene ID= ENSG00000186998.15 TPM= 39.5 Transcript Type= protein_coding
chr22	29259852	29267988	29259852	29267988	-	transcript1361.chr22.nic@RHBDD3	transcript1361.chr22.nic	protein_coding	29267748,29267426,29265479,29263835,29260702,29260326,29259852	29267988,29267577,29265668,29264218,29260868,29260613,29260237	Gene ID= ENSG00000100263.13 TPM= 3.5 Transcript Type= NA
chr22	29259852	29267988	29259852	29267988	-	transcript1363.chr22.nic@RHBDD3	transcript1363.chr22.nic	protein_coding	29267748,29267426,29263835,29260702,29260326,29259852	29267988,29267577,29265668,29260864,29260613,29260237	Gene ID= ENSG00000100263.13 TPM= 5.84 Transcript Type= NA
chr22	29259852	29267988	29259852	29267988	-	transcript1364.chr22.nnic@RHBDD3	transcript1364.chr22.nnic	protein_coding	29267748,29267426,29265479,29260702,29260326,29259852	29267988,29267577,29265668,29260864,29260613,29260237	Gene ID= ENSG00000100263.13 TPM= 2.34 Transcript Type= NA
chr22	29259852	29267988	29259852	29267988	-	transcript1373.chr22.nic@RHBDD3	transcript1373.chr22.nic	protein_coding	29267748,29267426,29263835,29260326,29259852	29267988,29267577,29265668,29260864,29260237	Gene ID= ENSG00000100263.13 TPM= 2.34 Transcript Type= NA
chr22	29259852	29267978	29259852	29267978	-	ENST00000216085.11@RHBDD3	ENST00000216085.11	protein_coding	29267748,29267426,29265479,29263835,29260702,29260326,29259852	29267978,29267577,29265668,29264218,29260864,29260613,29260237	Gene ID= ENSG00000100263.13 TPM= 30.36 Transcript Type= protein_coding
chr22	29259904	29267945	29259904	29267945	-	ENST00000413137.6@RHBDD3	ENST00000413137.6	protein_coding	29267748,29267426,29265479,29261200,29260702,29260326,29259904	29267945,29267577,29265668,29261425,29260868,29260613,29260237	Gene ID= ENSG00000100263.13 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr22	29268018	29300525	29268018	29300525	+	ENST00000397938.6@EWSR1	ENST00000397938.6	protein_coding	29268018,29272216,29272380,29273741,29278030,29282390,29286923,29288606,29291562,29292137,29292488,29296239,29297827,29298733,29299234,29299599,29300122	29268349,29272252,29272431,29273864,29278216,29282557,29287134,29288786,29291599,29292169,29292606,29296368,29297949,29298895,29299331,29299851,29300525	Gene ID= ENSG00000182944.17 TPM= 47.87 Transcript Type= protein_coding
chr22	29268257	29300522	29268257	29300522	+	transcript1397.chr22.nnic@EWSR1	transcript1397.chr22.nnic	protein_coding	29268257,29272216,29272380,29273741,29278030,29282390,29286923,29288606,29292137,29292488,29296239,29297827,29298733,29299234,29299599,29300122	29268349,29272252,29272431,29273864,29278216,29282557,29287134,29288786,29292169,29292606,29296368,29297949,29298895,29299331,29299851,29300522	Gene ID= ENSG00000182944.17 TPM= 11.48 Transcript Type= NA
chr22	29268009	29300524	29268009	29300524	+	ENST00000629659.2@EWSR1	ENST00000629659.2	protein_coding	29268009,29272216,29272380,29273738,29278030,29282390,29286923,29292137,29292488,29296239,29297827,29298733,29299234,29299599,29300122	29268349,29272252,29272431,29273864,29278216,29282557,29287134,29292169,29292606,29296368,29297949,29298895,29299331,29299851,29300524	Gene ID= ENSG00000182944.17 TPM= 1.75 Transcript Type= protein_coding
chr22	29268273	29300336	29268273	29300336	+	ENST00000406548.5@EWSR1	ENST00000406548.5	protein_coding	29268273,29272216,29272380,29273741,29278030,29282390,29286923,29288606,29291565,29292137,29292488,29296239,29297827,29298733,29299234,29299599,29300122	29268349,29272252,29272431,29273864,29278216,29282557,29287134,29288786,29291599,29292169,29292606,29296368,29297949,29298895,29299331,29299851,29300336	Gene ID= ENSG00000182944.17 TPM= 105.38 Transcript Type= protein_coding
chr22	29290830	29300525	29290830	29300525	+	ENST00000469669.5@EWSR1	ENST00000469669.5	protein_coding	29290830,29292488,29296239,29297827,29298733,29299234,29299599,29300122	29292169,29292606,29296368,29297949,29298895,29299331,29299851,29300525	Gene ID= ENSG00000182944.17 TPM= 4.67 Transcript Type= retained_intron
chr22	29306582	29312785	29306582	29312785	+	ENST00000616432.4@GAS2L1	ENST00000616432.4	protein_coding	29306582,29308087,29310439,29310638,29310827,29311462	29307153,29308738,29310546,29310734,29310998,29312785	Gene ID= ENSG00000185340.15 TPM= 83.51 Transcript Type= protein_coding
chr22	29307026	29312784	29307026	29312784	+	transcript1416.chr22.nnic@GAS2L1	transcript1416.chr22.nnic	protein_coding	29307026,29308087,29310439,29310638,29310827,29311976	29307153,29308738,29310546,29310734,29310998,29312784	Gene ID= ENSG00000185340.15 TPM= 7.34 Transcript Type= NA
chr22	29307058	29312785	29307058	29312785	+	ENST00000618518.3@GAS2L1	ENST00000618518.3	protein_coding	29307058,29310439,29310638,29310827,29311462	29308738,29310546,29310734,29310998,29312785	Gene ID= ENSG00000185340.15 TPM= 16.5 Transcript Type= protein_coding
chr22	29307023	29312785	29307023	29312785	+	ENST00000406549.7@GAS2L1	ENST00000406549.7	protein_coding	29307023,29308087,29310439,29310638,29310827,29312143	29307153,29308738,29310546,29310734,29310998,29312785	Gene ID= ENSG00000185340.15 TPM= 3.84 Transcript Type= protein_coding
chr22	29307052	29312785	29307052	29312785	+	ENST00000621062.4@GAS2L1	ENST00000621062.4	protein_coding	29307052,29308059,29310439,29310638,29310827,29311462	29307153,29308738,29310546,29310734,29310998,29312785	Gene ID= ENSG00000185340.15 TPM= 13.65 Transcript Type= protein_coding
chr22	29312933	29315756	29312933	29315756	-	ENST00000216101.6@RASL10A	ENST00000216101.6	protein_coding	29315028,29313863,29312933	29315756,29313987,29313568	Gene ID= ENSG00000100276.9 TPM= 4.67 Transcript Type= protein_coding
chr22	29327682	29388583	29327682	29388583	-	ENST00000432560.6@AP1B1	ENST00000432560.6	protein_coding	29388424,29367207,29363001,29359824,29358726,29356426,29354650,29351705,29351171,29350035,29349218,29342285,29341501,29340656,29338990,29334265,29331787,29331449,29330623,29330378,29327682	29388583,29367270,29363106,29359959,29358971,29356616,29354871,29351825,29351266,29350150,29349383,29342383,29341760,29340857,29339133,29334410,29331916,29331533,29330709,29330532,29328895	Gene ID= ENSG00000100280.16 TPM= 40.87 Transcript Type= protein_coding
chr22	29327865	29388583	29327865	29388583	-	ENST00000317368.11@AP1B1	ENST00000317368.11	protein_coding	29388424,29367207,29363001,29359824,29358726,29356426,29354650,29351705,29351171,29350035,29349218,29342285,29341501,29340656,29338990,29334265,29331787,29331449,29330623,29330378,29327865	29388583,29367270,29363106,29359959,29358971,29356616,29354871,29351825,29351266,29350150,29349383,29342383,29341760,29340857,29339133,29334350,29331916,29331533,29330709,29330532,29328895	Gene ID= ENSG00000100280.16 TPM= 26.85 Transcript Type= protein_coding
chr22	29480230	29491390	29480230	29491390	+	ENST00000310624.6@NEFH	ENST00000310624.6	protein_coding	29480230,29483375,29485723,29488849	29481145,29483574,29485847,29491390	Gene ID= ENSG00000100285.9 TPM= 4.67 Transcript Type= protein_coding
chr22	29508329	29553692	29508329	29553692	-	transcript1435.chr22.nic@THOC5	transcript1435.chr22.nic	protein_coding	29553448,29550728,29549052,29544460,29543429,29542859,29539330,29536624,29531831,29531078,29529162,29528426,29528078,29525838,29520998,29520008,29519006,29517263,29517029,29512021,29511106,29508329	29553692,29550843,29549158,29544603,29543542,29542956,29539476,29536738,29531963,29531110,29529239,29528466,29528177,29525946,29521099,29520104,29519120,29517366,29517116,29512136,29511296,29508520	Gene ID= ENSG00000100296.13 TPM= 2.34 Transcript Type= NA
chr22	29508168	29553766	29508168	29553766	-	transcript1437.chr22.nic@THOC5	transcript1437.chr22.nic	protein_coding	29553671,29549052,29544460,29543429,29542859,29539330,29536624,29531831,29531078,29529162,29528426,29528078,29525838,29520998,29520008,29519006,29517263,29517029,29512021,29511106,29508168	29553766,29549158,29544603,29543542,29542956,29539476,29536738,29531963,29531110,29529239,29528466,29528177,29525946,29521099,29520104,29519120,29517366,29517116,29512136,29511296,29508520	Gene ID= ENSG00000100296.13 TPM= 3.5 Transcript Type= NA
chr22	29508329	29553673	29508329	29553673	-	transcript1442.chr22.nnic@THOC5	transcript1442.chr22.nnic	protein_coding	29553448,29550728,29549052,29544460,29543429,29542859,29539330,29536624,29531831,29529162,29528426,29528078,29525838,29520998,29520008,29519006,29517263,29517029,29512021,29511106,29508329	29553673,29550835,29549158,29544603,29543542,29542956,29539476,29536738,29531963,29529239,29528466,29528177,29525946,29521099,29520104,29519120,29517366,29517116,29512136,29511296,29508520	Gene ID= ENSG00000100296.13 TPM= 2.34 Transcript Type= NA
chr22	29505879	29553782	29505879	29553782	-	ENST00000490103.5@THOC5	ENST00000490103.5	protein_coding	29553671,29549052,29544460,29543429,29542859,29539330,29536624,29531831,29529162,29528426,29528078,29525838,29520998,29520008,29519006,29517263,29517029,29512021,29511106,29505879	29553782,29549158,29544603,29543542,29542956,29539476,29536738,29531963,29529239,29528466,29528177,29525946,29521099,29520104,29519120,29517366,29517116,29512136,29511296,29508520	Gene ID= ENSG00000100296.13 TPM= 3.5 Transcript Type= protein_coding
chr22	29508168	29553655	29508168	29553655	-	ENST00000397872.5@THOC5	ENST00000397872.5	protein_coding	29553448,29550728,29549052,29544460,29543429,29542859,29539330,29536624,29531831,29529162,29528426,29528078,29525838,29520998,29520008,29519006,29517263,29517029,29512021,29511106,29508168	29553655,29550843,29549158,29544603,29543542,29542956,29539476,29536738,29531963,29529239,29528466,29528177,29525946,29521099,29520104,29519120,29517366,29517116,29512136,29511296,29508520	Gene ID= ENSG00000100296.13 TPM= 1.17 Transcript Type= protein_coding
chr22	29508168	29553655	29508168	29553655	-	ENST00000397871.5@THOC5	ENST00000397871.5	protein_coding	29553448,29549052,29544460,29543429,29542859,29539330,29536624,29531831,29529162,29528426,29528078,29525838,29520998,29520008,29519006,29517263,29517029,29512021,29511106,29508168	29553655,29549158,29544603,29543542,29542956,29539476,29536738,29531963,29529239,29528466,29528177,29525946,29521099,29520104,29519120,29517366,29517116,29512136,29511296,29508520	Gene ID= ENSG00000100296.13 TPM= 1.17 Transcript Type= protein_coding
chr22	29554808	29581337	29554808	29581337	-	ENST00000216121.11@NIPSNAP1	ENST00000216121.11	protein_coding	29580985,29570405,29570162,29569193,29561792,29561506,29561171,29560734,29558870,29554808	29581337,29570532,29570207,29569287,29561862,29561646,29561202,29560828,29558953,29555999	Gene ID= ENSG00000184117.11 TPM= 66.55 Transcript Type= protein_coding
chr22	29603558	29698598	29603558	29698598	+	ENST00000338641.8@NF2	ENST00000338641.8	protein_coding	29603558,29636751,29639090,29642202,29654657,29655594,29658189,29661205,29664990,29668333,29671826,29673269,29674836,29678196,29681439,29694752	29604112,29636876,29639212,29642285,29654725,29655676,29658264,29661339,29665064,29668446,29671948,29673486,29674941,29678323,29681601,29698598	Gene ID= ENSG00000186575.17 TPM= 175.14 Transcript Type= protein_coding
chr22	29730956	29767055	29730956	29767055	-	transcript1501.chr22.nic@ZMAT5	transcript1501.chr22.nic	protein_coding	29766949,29748418,29742418,29740650,29738330,29730956	29767055,29748571,29742480,29740730,29738441,29731354	Gene ID= ENSG00000100319.12 TPM= 10.51 Transcript Type= NA
chr22	29730956	29766961	29730956	29766961	-	ENST00000344318.3@ZMAT5	ENST00000344318.3	protein_coding	29766872,29748418,29742418,29740650,29738330,29730956	29766961,29748571,29742480,29740730,29738441,29731354	Gene ID= ENSG00000100319.12 TPM= 12.84 Transcript Type= protein_coding
chr22	29746167	29767011	29746167	29767011	-	ENST00000489010.1@ZMAT5	ENST00000489010.1	protein_coding	29766949,29746167	29767011,29748571	Gene ID= ENSG00000100319.12 TPM= 1.17 Transcript Type= retained_intron
chr22	29767369	29770413	29767369	29770413	+	ENST00000330029.6@UQCR10	ENST00000330029.6	protein_coding	29767369,29769678	29767548,29770413	Gene ID= ENSG00000184076.13 TPM= 15.18 Transcript Type= protein_coding
chr22	29788611	29838274	29788611	29838274	-	transcript1469.chr22.nic@ASCC2	transcript1469.chr22.nic	protein_coding	29838178,29834489,29833541,29832245,29825622,29825087,29822335,29816006,29814657,29813430,29808111,29806797,29806485,29806216,29804638,29801994,29800991,29793577,29793360,29792433,29790469,29788611	29838274,29834550,29833614,29832342,29825780,29825257,29822464,29816073,29814767,29813542,29808185,29806904,29806553,29806290,29804830,29802208,29801110,29793676,29793490,29792535,29790548,29789184	Gene ID= ENSG00000100325.14 TPM= 17.05 Transcript Type= NA
chr22	29788611	29838272	29788611	29838272	-	transcript1488.chr22.nnic@ASCC2	transcript1488.chr22.nnic	protein_coding	29838178,29825622,29825087,29822335,29816006,29814657,29813430,29808111,29806797,29806485,29806216,29804638,29801994,29800991,29793577,29793360,29792433,29790469,29788611	29838272,29825780,29825257,29822464,29816073,29814767,29813542,29808185,29806904,29806553,29806290,29804830,29802208,29801110,29793676,29793490,29792535,29790548,29789184	Gene ID= ENSG00000100325.14 TPM= 10.82 Transcript Type= NA
chr22	29788611	29838269	29788611	29838269	-	transcript1489.chr22.nic@ASCC2	transcript1489.chr22.nic	protein_coding	29838178,29832245,29825087,29822335,29816006,29814657,29813430,29808111,29806797,29806485,29806216,29804638,29801994,29800991,29793577,29793360,29792433,29790469,29788611	29838269,29832342,29825257,29822464,29816073,29814767,29813542,29808185,29806904,29806553,29806290,29804830,29802208,29801110,29793676,29793490,29792535,29790548,29789184	Gene ID= ENSG00000100325.14 TPM= 11.99 Transcript Type= NA
chr22	29788608	29838274	29788608	29838274	-	ENST00000307790.7@ASCC2	ENST00000307790.7	protein_coding	29838178,29832245,29825622,29825087,29822335,29816006,29814657,29813430,29808111,29806797,29806485,29806216,29804638,29801994,29800991,29793577,29793360,29792433,29790469,29788608	29838274,29832342,29825780,29825257,29822464,29816073,29814767,29813542,29808185,29806904,29806553,29806290,29804830,29802208,29801110,29793676,29793490,29792535,29790548,29789184	Gene ID= ENSG00000100325.14 TPM= 49.16 Transcript Type= protein_coding
chr22	29788642	29838276	29788642	29838276	-	ENST00000397771.6@ASCC2	ENST00000397771.6	protein_coding	29838178,29834489,29832245,29825622,29825087,29822335,29816006,29814657,29813430,29808111,29806797,29806485,29806216,29804638,29801994,29800991,29793577,29793360,29792433,29790469,29788642	29838276,29834550,29832342,29825780,29825257,29822464,29816073,29814767,29813542,29808185,29806904,29806553,29806290,29804830,29802208,29801110,29793676,29793490,29792535,29790548,29789184	Gene ID= ENSG00000100325.14 TPM= 54.29 Transcript Type= protein_coding
chr22	29883134	30000488	29883134	30000488	+	transcript1521.chr22.nic@MTMR3	transcript1521.chr22.nic	protein_coding	29883134,29957036,29970976,29978442,29978936,29988480,29991504,29998761	29883359,29957088,29971062,29978531,29979052,29988562,29991670,30000488	Gene ID= ENSG00000100330.15 TPM= 3.5 Transcript Type= NA
chr22	29883155	30027880	29883155	30027880	+	ENST00000401950.6@MTMR3	ENST00000401950.6	protein_coding	29883155,29957036,29970976,29978442,29978936,29988480,29991504,29998761,30002880,30007114,30007901,30009018,30012368,30013356,30016528,30017927,30019480,30022029,30022609,30025630	29883359,29957088,29971062,29978531,29979052,29988562,29991670,29998857,30002993,30007319,30008032,30009129,30012563,30013541,30016698,30018072,30020884,30022139,30022697,30027880	Gene ID= ENSG00000100330.15 TPM= 10.31 Transcript Type= protein_coding
chr22	29883198	30027858	29883198	30027858	+	ENST00000323630.9@MTMR3	ENST00000323630.9	protein_coding	29883198,29957036,29978442,29978936,29988480,29991504,29998761,30002880,30007114,30007901,30009018,30012368,30013356,30016528,30017927,30019480,30022029,30022609,30025630	29883359,29957088,29978531,29979052,29988562,29991670,29998857,30002993,30007319,30008032,30009129,30012563,30013541,30016698,30018072,30020884,30022139,30022697,30027858	Gene ID= ENSG00000100330.15 TPM= 5.64 Transcript Type= protein_coding
chr22	29903392	29906245	29903392	29906245	-	transcript1526.chr22.nnic@NA	transcript1526.chr22.nnic	NA	29903392	29906245	Gene ID= novel_gene_chr22_1527 TPM= 3.5 Transcript Type= NA
chr22	30025685	30030506	30025685	30030506	+	transcript1524.chr22.nnic@NA	transcript1524.chr22.nnic	NA	30025685	30030506	Gene ID= novel_gene_chr22_1525 TPM= 8.56 Transcript Type= NA
chr22	30262829	30266840	30262829	30266840	-	ENST00000215781.2@OSM	ENST00000215781.2	protein_coding	30266766,30265002,30262829	30266840,30265144,30264464	Gene ID= ENSG00000099985.3 TPM= 4.67 Transcript Type= protein_coding
chr22	30285117	30289627	30285117	30289627	-	ENST00000407689.7@CASTOR1	ENST00000407689.7	protein_coding	30289385,30288706,30287373,30287155,30286825,30286263,30286016,30285832,30285117	30289627,30288776,30287560,30287287,30286948,30286376,30286098,30285926,30285688	Gene ID= ENSG00000239282.7 TPM= 42.03 Transcript Type= protein_coding
chr22	30285146	30289607	30285146	30289607	-	ENST00000404953.7@CASTOR1	ENST00000404953.7	protein_coding	30289385,30288706,30287373,30287155,30286825,30286016,30285832,30285146	30289607,30288776,30287560,30287287,30286948,30286098,30285926,30285688	Gene ID= ENSG00000239282.7 TPM= 4.67 Transcript Type= protein_coding
chr22	30291990	30327046	30291990	30327046	-	ENST00000215790.11@TBC1D10A	ENST00000215790.11	protein_coding	30326673,30304531,30299444,30295737,30294941,30294796,30293921,30293651,30291990	30327046,30304630,30299551,30295843,30295055,30294861,30294110,30293805,30292851	Gene ID= ENSG00000099992.15 TPM= 50.48 Transcript Type= protein_coding
chr22	30291993	30326901	30291993	30326901	-	ENST00000403477.7@TBC1D10A	ENST00000403477.7	protein_coding	30326673,30304531,30299444,30295737,30294941,30294796,30293921,30293651,30291993	30326901,30304651,30299551,30295843,30295055,30294861,30294110,30293805,30292851	Gene ID= ENSG00000099992.15 TPM= 3.19 Transcript Type= protein_coding
chr22	30291990	30326945	30291990	30326945	-	transcript1539.chr22.nic@TBC1D10A	transcript1539.chr22.nic	protein_coding	30326673,30304531,30299444,30295737,30294941,30294796,30293921,30293651,30291990	30326945,30304630,30299551,30295843,30295055,30294861,30294110,30293805,30293319	Gene ID= ENSG00000099992.15 TPM= 2.8 Transcript Type= NA
chr22	30291990	30326927	30291990	30326927	-	transcript1542.chr22.nic@TBC1D10A	transcript1542.chr22.nic	protein_coding	30326673,30299444,30295737,30294941,30294796,30293921,30293651,30291990	30326927,30299551,30295843,30295055,30294861,30294110,30293805,30292851	Gene ID= ENSG00000099992.15 TPM= 4.94 Transcript Type= NA
chr22	30291990	30326945	30291990	30326945	-	transcript1543.chr22.nic@TBC1D10A	transcript1543.chr22.nic	protein_coding	30326673,30304531,30299444,30295737,30294941,30294796,30293921,30291990	30326945,30304630,30299551,30295843,30295055,30294861,30294110,30293805	Gene ID= ENSG00000099992.15 TPM= 5.14 Transcript Type= NA
chr22	30331988	30356947	30331988	30356947	-	ENST00000215793.12@SF3A1	ENST00000215793.12	protein_coding	30356730,30352951,30346312,30344933,30342805,30342200,30341692,30340695,30340196,30339130,30338789,30337690,30337026,30335652,30335467,30331988	30356947,30353072,30346519,30345190,30342879,30342350,30341885,30340812,30340381,30339251,30339034,30337897,30337180,30335753,30335538,30334695	Gene ID= ENSG00000099995.18 TPM= 33.86 Transcript Type= protein_coding
chr22	30356635	30367096	30356635	30367096	+	ENST00000399824.6@CCDC157	ENST00000399824.6	protein_coding	30356635,30361961,30365990	30357132,30362114,30367096	Gene ID= ENSG00000187860.10 TPM= 3.5 Transcript Type= protein_coding
chr22	30378817	30387388	30378817	30387388	-	ENST00000382363.7@RNF215	ENST00000382363.7	protein_coding	30387029,30386616,30386070,30385904,30384339,30380282,30380062,30379711,30378817	30387388,30386759,30386141,30385989,30384495,30380401,30380205,30379813,30379622	Gene ID= ENSG00000099999.14 TPM= 8.17 Transcript Type= protein_coding
chr22	30396857	30425317	30396857	30425317	+	ENST00000615189.4@SEC14L2	ENST00000615189.4	protein_coding	30396857,30399643,30406342,30407095,30407415,30409187,30409426,30410596,30415759,30415948,30416234,30422277	30397170,30399718,30406385,30407154,30407603,30409282,30409486,30410679,30415865,30416087,30416403,30425317	Gene ID= ENSG00000100003.17 TPM= 1.17 Transcript Type= protein_coding
chr22	30409136	30411759	30409136	30411759	+	transcript1566.chr22.nnic@NA	transcript1566.chr22.nnic	NA	30409136	30411759	Gene ID= novel_gene_chr22_1567 TPM= 7.01 Transcript Type= NA
chr22	30425530	30429053	30425530	30429053	+	ENST00000266263.9@MTFP1	ENST00000266263.9	protein_coding	30425530,30426717,30427171,30428462	30425946,30426844,30427403,30429053	Gene ID= ENSG00000242114.5 TPM= 17.51 Transcript Type= protein_coding
chr22	30425776	30429053	30425776	30429053	+	ENST00000355143.8@MTFP1	ENST00000355143.8	protein_coding	30425776,30426717,30428462	30425946,30426844,30429053	Gene ID= ENSG00000242114.5 TPM= 1.17 Transcript Type= protein_coding
chr22	30488913	30505695	30488913	30505695	-	ENST00000255858.11@SEC14L4	ENST00000255858.11	protein_coding	30505558,30503677,30495928,30495583,30495254,30494866,30494150,30492474,30492049,30491834,30491573,30488913	30505695,30503752,30495971,30495642,30495442,30494961,30494210,30492557,30492155,30491973,30491742,30490246	Gene ID= ENSG00000133488.14 TPM= 3.5 Transcript Type= protein_coding
chr22	30522799	30542688	30522799	30542688	-	transcript1588.chr22.nnic@SEC14L6	transcript1588.chr22.nnic	protein_coding	30542156,30538827,30533996,30532797,30532525,30529289,30529087,30525826,30525611,30522799	30542688,30538902,30534039,30532856,30532713,30529349,30529170,30525932,30525750,30525109	Gene ID= ENSG00000214491.8 TPM= 13.63 Transcript Type= NA
chr22	30522799	30542650	30522799	30542650	-	transcript1589.chr22.nnic@SEC14L6	transcript1589.chr22.nnic	protein_coding	30542466,30538827,30533996,30532797,30532525,30529289,30529087,30525826,30525611,30522799	30542650,30538902,30534039,30532856,30532713,30529349,30529170,30525932,30525750,30525109	Gene ID= ENSG00000214491.8 TPM= 4.29 Transcript Type= NA
chr22	30522799	30542609	30522799	30542609	-	transcript1591.chr22.nnic@SEC14L6	transcript1591.chr22.nnic	protein_coding	30542156,30538827,30533996,30532797,30529289,30529087,30525826,30525611,30522799	30542609,30538902,30534039,30532856,30529349,30529170,30525932,30525750,30525109	Gene ID= ENSG00000214491.8 TPM= 4.29 Transcript Type= NA
chr22	30526393	30527738	30526393	30527738	+	transcript1597.chr22.nnic@NA	transcript1597.chr22.nnic	NA	30526393	30527738	Gene ID= novel_gene_chr22_1598 TPM= 4.67 Transcript Type= NA
chr22	30554635	30574578	30554635	30574578	-	ENST00000402369.5@GAL3ST1	ENST00000402369.5	protein_coding	30574466,30557262,30554635	30574578,30557401,30556093	Gene ID= ENSG00000128242.12 TPM= 7.01 Transcript Type= protein_coding
chr22	30576625	30591940	30576625	30591940	-	ENST00000354694.11@PES1	ENST00000354694.11	protein_coding	30591810,30589191,30588021,30587286,30584546,30584365,30581528,30581334,30581012,30580571,30580053,30579751,30579137,30578837,30576625	30591940,30589270,30588174,30587395,30584717,30584454,30581644,30581408,30581101,30580701,30580178,30579935,30579303,30578998,30577129	Gene ID= ENSG00000100029.17 TPM= 65.97 Transcript Type= protein_coding
chr22	30576630	30591916	30576630	30591916	-	transcript1602.chr22.nic@PES1	transcript1602.chr22.nic	protein_coding	30591810,30589191,30588021,30587286,30584546,30584365,30581528,30581334,30581012,30580571,30579751,30579137,30578837,30576630	30591916,30589270,30588174,30587395,30584717,30584454,30581644,30581408,30581101,30580701,30580178,30579303,30578998,30577129	Gene ID= ENSG00000100029.17 TPM= 4.09 Transcript Type= NA
chr22	30607152	30627005	30607152	30627005	+	ENST00000405742.7@TCN2	ENST00000405742.7	protein_coding	30607152,30610871,30612885,30614349,30615301,30615601,30617330,30622968,30626460	30607395,30611063,30613042,30614501,30615473,30615787,30617495,30623083,30627005	Gene ID= ENSG00000185339.8 TPM= 30.36 Transcript Type= protein_coding
chr22	30607204	30627060	30607204	30627060	+	ENST00000407817.3@TCN2	ENST00000407817.3	protein_coding	30607204,30610871,30612873,30614349,30615301,30615601,30617330,30622968,30626460	30607395,30611063,30612961,30614501,30615473,30615787,30617495,30623083,30627060	Gene ID= ENSG00000185339.8 TPM= 38.53 Transcript Type= protein_coding
chr22	30635652	30647893	30635652	30647893	+	ENST00000343605.4@SLC35E4	ENST00000343605.4	protein_coding	30635652,30646598	30637069,30647893	Gene ID= ENSG00000100036.12 TPM= 19.85 Transcript Type= protein_coding
chr22	30662031	30667879	30662031	30667879	-	transcript1624.chr22.nic@DUSP18	transcript1624.chr22.nic	protein_coding	30667462,30663404,30662031	30667879,30664080,30663260	Gene ID= ENSG00000167065.13 TPM= 4.09 Transcript Type= NA
chr22	30662031	30667890	30662031	30667890	-	ENST00000334679.3@DUSP18	ENST00000334679.3	protein_coding	30667462,30662031	30667890,30664080	Gene ID= ENSG00000167065.13 TPM= 18.1 Transcript Type= protein_coding
chr22	30652051	30667843	30652051	30667843	-	ENST00000404885.5@DUSP18	ENST00000404885.5	protein_coding	30667462,30663404,30652051	30667843,30664080,30652297	Gene ID= ENSG00000167065.13 TPM= 1.17 Transcript Type= protein_coding
chr22	30653813	30655159	30653813	30655159	-	transcript1636.chr22.nnic@NA	transcript1636.chr22.nnic	NA	30653813	30655159	Gene ID= novel_gene_chr22_1637 TPM= 2.34 Transcript Type= NA
chr22	30654546	30655306	30654546	30655306	+	transcript1634.chr22.nnic@NA	transcript1634.chr22.nnic	NA	30654546	30655306	Gene ID= novel_gene_chr22_1635 TPM= 2.34 Transcript Type= NA
chr22	30694806	30907824	30694806	30907824	+	ENST00000332585.10@OSBP2	ENST00000332585.10	protein_coding	30694806,30741161,30870429,30887426,30888223,30889177,30889490,30890728,30893122,30893463,30893638,30893817,30905837,30906197	30695553,30741369,30870682,30887618,30888340,30889234,30889636,30890973,30893242,30893566,30893733,30894001,30906069,30907824	Gene ID= ENSG00000184792.15 TPM= 9.34 Transcript Type= protein_coding
chr22	30887915	30922094	30887915	30922094	+	transcript1641.chr22.nnic@OSBP2	transcript1641.chr22.nnic	protein_coding	30887915,30911298,30921588	30890190,30911431,30922094	Gene ID= ENSG00000184792.15 TPM= 21.02 Transcript Type= NA
chr22	30970455	30978841	30970455	30978841	+	transcript1660.chr22.nic@TUG1	transcript1660.chr22.nic	antisense_RNA	30970455,30972924,30975170	30971779,30973587,30978841	Gene ID= ENSG00000253352.8 TPM= 17.51 Transcript Type= NA
chr22	31081275	31104624	31081275	31104624	+	transcript1675.chr22.nic@SMTN	transcript1675.chr22.nic	protein_coding	31081275,31083179,31087965,31088454,31088699,31088872,31089699,31090108,31090808,31090961,31091675,31095303,31095534,31096733,31096998,31097269,31098667,31099062,31099745,31100885,31104316	31081456,31083309,31088113,31088606,31088777,31088969,31090019,31090180,31090879,31091482,31091847,31095455,31095609,31096897,31097060,31097338,31098840,31099179,31099896,31101049,31104624	Gene ID= ENSG00000183963.18 TPM= 17.9 Transcript Type= NA
chr22	31081319	31104624	31081319	31104624	+	ENST00000333137.11@SMTN	ENST00000333137.11	protein_coding	31081319,31083179,31087965,31088513,31088699,31088872,31089699,31090108,31090808,31090961,31091675,31095303,31095534,31096733,31096998,31097269,31098667,31099062,31099745,31100885,31104316	31081456,31083309,31088113,31088606,31088777,31088969,31090019,31090180,31090879,31091482,31091847,31095455,31095609,31096897,31097060,31097338,31098840,31099179,31099896,31101049,31104624	Gene ID= ENSG00000183963.18 TPM= 103.13 Transcript Type= protein_coding
chr22	31081319	31104624	31081319	31104624	+	ENST00000347557.6@SMTN	ENST00000347557.6	protein_coding	31081319,31083179,31087965,31088513,31088699,31088872,31089699,31090108,31090808,31090961,31091675,31095303,31095534,31096733,31096998,31097269,31098667,31099062,31099745,31104316	31081456,31083309,31088113,31088606,31088777,31088969,31090019,31090180,31090879,31091482,31091847,31095455,31095609,31096897,31097060,31097338,31098840,31099179,31099896,31104624	Gene ID= ENSG00000183963.18 TPM= 5.35 Transcript Type= protein_coding
chr22	31081319	31104623	31081319	31104623	+	ENST00000358743.5@SMTN	ENST00000358743.5	protein_coding	31081319,31083179,31087965,31088513,31088699,31088872,31089699,31090108,31090808,31090961,31091675,31095303,31095534,31096733,31096998,31097269,31098667,31099062,31099745,31100885,31104316	31081456,31083309,31088113,31088606,31088777,31088969,31090019,31090180,31090879,31091482,31091847,31095455,31095609,31096897,31097060,31097338,31098840,31099179,31099896,31100953,31104623	Gene ID= ENSG00000183963.18 TPM= 1.84 Transcript Type= protein_coding
chr22	31104777	31107605	31104777	31107605	-	transcript1691.chr22.nic@SELENOM	transcript1691.chr22.nic	protein_coding	31107377,31105930,31105208,31104777	31107605,31105965,31105692,31105128	Gene ID= ENSG00000198832.10 TPM= 2.92 Transcript Type= NA
chr22	31104777	31107546	31104777	31107546	-	transcript1692.chr22.nic@SELENOM	transcript1692.chr22.nic	protein_coding	31107377,31105208,31104777	31107546,31105965,31105128	Gene ID= ENSG00000198832.10 TPM= 2.92 Transcript Type= NA
chr22	31104777	31107568	31104777	31107568	-	ENST00000400299.6@SELENOM	ENST00000400299.6	protein_coding	31107377,31105930,31105658,31105208,31104777	31107568,31105965,31105692,31105286,31105128	Gene ID= ENSG00000198832.10 TPM= 101.58 Transcript Type= protein_coding
chr22	31125454	31134696	31125454	31134696	+	transcript1695.chr22.nic@INPP5J	transcript1695.chr22.nic	protein_coding	31125454,31126376,31126613,31126921,31127357,31127951,31128214,31128471,31133098,31133406,31133610,31133913	31126010,31126489,31126721,31127037,31127532,31128062,31128323,31128654,31133235,31133483,31133714,31134696	Gene ID= ENSG00000185133.13 TPM= 7.01 Transcript Type= NA
chr22	31134807	31140438	31134807	31140438	-	transcript1699.chr22.nnic@PLA2G3	transcript1699.chr22.nnic	protein_coding	31139841,31138305,31137710,31136908,31136683,31136106,31134807	31140438,31138799,31137993,31137040,31136799,31136168,31135936	Gene ID= ENSG00000100078.3 TPM= 2.34 Transcript Type= NA
chr22	31134809	31140607	31134809	31140607	-	ENST00000215885.3@PLA2G3	ENST00000215885.3	protein_coding	31139841,31138667,31138276,31137710,31136908,31136683,31134809	31140607,31138799,31138410,31137993,31137040,31136799,31135936	Gene ID= ENSG00000100078.3 TPM= 9.92 Transcript Type= protein_coding
chr22	31134809	31140474	31134809	31140474	-	transcript1702.chr22.nnic@PLA2G3	transcript1702.chr22.nnic	protein_coding	31139841,31138892,31138276,31137710,31136908,31136683,31134809	31140474,31138979,31138799,31137993,31137040,31136799,31135936	Gene ID= ENSG00000100078.3 TPM= 4.09 Transcript Type= NA
chr22	31160191	31207013	31160191	31207013	+	transcript1707.chr22.nnic@RNF185	transcript1707.chr22.nnic	protein_coding	31160191,31176262,31187047,31192684,31195469,31196936,31201498,31204489	31160303,31176417,31187270,31192702,31195581,31196990,31201615,31207013	Gene ID= ENSG00000138942.15 TPM= 15.8 Transcript Type= NA
chr22	31160177	31207013	31160177	31207013	+	transcript1714.chr22.nic@RNF185	transcript1714.chr22.nic	protein_coding	31160177,31192684,31195469,31196936,31201498,31204489	31160303,31192702,31195581,31196990,31201615,31207013	Gene ID= ENSG00000138942.15 TPM= 9.96 Transcript Type= NA
chr22	31160193	31207019	31160193	31207019	+	ENST00000326132.10@RNF185	ENST00000326132.10	protein_coding	31160193,31187047,31192684,31195469,31196936,31201498,31204489	31160303,31187270,31192702,31195581,31196990,31201615,31207019	Gene ID= ENSG00000138942.15 TPM= 70.44 Transcript Type= protein_coding
chr22	31160243	31207012	31160243	31207012	+	ENST00000266252.8@RNF185	ENST00000266252.8	protein_coding	31160243,31187047,31192684,31201498,31204489	31160303,31187270,31192702,31201615,31207012	Gene ID= ENSG00000138942.15 TPM= 4.12 Transcript Type= protein_coding
chr22	31160211	31207013	31160211	31207013	+	ENST00000426256.6@RNF185	ENST00000426256.6	protein_coding	31160211,31187047,31192684,31195469,31196936,31201498,31204489	31160303,31187270,31192702,31195581,31197158,31201615,31207013	Gene ID= ENSG00000138942.15 TPM= 4.12 Transcript Type= protein_coding
chr22	31160208	31207013	31160208	31207013	+	ENST00000471384.5@RNF185	ENST00000471384.5	protein_coding	31160208,31192684,31195469,31196936,31201498,31204489	31160303,31192702,31195581,31197157,31201615,31207013	Gene ID= ENSG00000138942.15 TPM= 4.12 Transcript Type= retained_intron
chr22	31177028	31181358	31177028	31181358	+	transcript1721.chr22.nnic@NA	transcript1721.chr22.nnic	NA	31177028	31181358	Gene ID= novel_gene_chr22_1722 TPM= 2.34 Transcript Type= NA
chr22	31212187	31280080	31212187	31280080	+	transcript1730.chr22.nic@LIMK2	transcript1730.chr22.nic	protein_coding	31212187,31225720,31258291,31259889,31262134,31262595,31265946,31266984,31267776,31268144,31271136,31272530,31273452,31275151,31278297	31212424,31225819,31259230,31260077,31262239,31262791,31266132,31267070,31267907,31268200,31271201,31272704,31273507,31275308,31280080	Gene ID= ENSG00000182541.17 TPM= 2.34 Transcript Type= NA
chr22	31212295	31280080	31212295	31280080	+	ENST00000331728.8@LIMK2	ENST00000331728.8	protein_coding	31212295,31225720,31258291,31259121,31259889,31262134,31262595,31265946,31266984,31267776,31268144,31271136,31272530,31273452,31275151,31278297	31212424,31225819,31258426,31259230,31260077,31262239,31262791,31266132,31267070,31267907,31268200,31271201,31272704,31273507,31275308,31280080	Gene ID= ENSG00000182541.17 TPM= 47.87 Transcript Type= protein_coding
chr22	31248402	31279734	31248402	31279734	+	ENST00000333611.8@LIMK2	ENST00000333611.8	protein_coding	31248402,31258291,31259121,31259889,31262134,31262595,31265946,31266984,31267776,31268144,31271136,31272530,31273452,31275151,31278297	31248769,31258426,31259230,31260077,31262239,31262791,31266132,31267070,31267907,31268200,31271201,31272704,31273507,31275308,31279734	Gene ID= ENSG00000182541.17 TPM= 11.68 Transcript Type= protein_coding
chr22	31281593	31292528	31281593	31292528	-	ENST00000215912.9@PIK3IP1	ENST00000215912.9	protein_coding	31292275,31291180,31290965,31289499,31289315,31281593	31292528,31291296,31291084,31289699,31289393,31283288	Gene ID= ENSG00000100100.12 TPM= 79.4 Transcript Type= protein_coding
chr22	31281613	31292534	31281613	31292534	-	ENST00000441972.5@PIK3IP1	ENST00000441972.5	protein_coding	31292275,31291180,31290965,31289499,31281613	31292534,31291296,31291084,31289699,31283288	Gene ID= ENSG00000100100.12 TPM= 8.17 Transcript Type= protein_coding
chr22	31281679	31290726	31281679	31290726	-	ENST00000493034.1@PIK3IP1	ENST00000493034.1	protein_coding	31289933,31289499,31289315,31281679	31290726,31289699,31289393,31283288	Gene ID= ENSG00000100100.12 TPM= 2.34 Transcript Type= retained_intron
chr22	31333477	31346350	31333477	31346350	-	transcript1762.chr22.nic@PATZ1	transcript1762.chr22.nic	protein_coding	31344332,31342897,31333477	31346350,31342960,31335863	Gene ID= ENSG00000100105.17 TPM= 4.67 Transcript Type= NA
chr22	31325809	31346232	31325809	31346232	-	ENST00000351933.8@PATZ1	ENST00000351933.8	protein_coding	31344332,31342897,31335692,31325809	31346232,31342960,31335863,31327309	Gene ID= ENSG00000100105.17 TPM= 8.17 Transcript Type= protein_coding
chr22	31325809	31346232	31325809	31346232	-	ENST00000405309.7@PATZ1	ENST00000405309.7	protein_coding	31344332,31342897,31335692,31328787,31325809	31346232,31342960,31335863,31328859,31327309	Gene ID= ENSG00000100105.17 TPM= 8.17 Transcript Type= protein_coding
chr22	31340677	31345776	31340677	31345776	-	ENST00000215919.3@PATZ1	ENST00000215919.3	protein_coding	31344332,31342897,31340677	31345776,31342960,31341683	Gene ID= ENSG00000100105.17 TPM= 8.17 Transcript Type= protein_coding
chr22	31399523	31434452	31399523	31434452	+	ENST00000331457.8@DRG1	ENST00000331457.8	protein_coding	31399523,31400620,31403029,31411012,31420256,31423280,31426615,31427060,31433872	31399725,31400743,31403204,31411081,31420425,31423410,31426782,31427182,31434452	Gene ID= ENSG00000185721.12 TPM= 52.54 Transcript Type= protein_coding
chr22	31424813	31426625	31424813	31426625	-	transcript1766.chr22.nnic@NA	transcript1766.chr22.nnic	NA	31424813	31426625	Gene ID= novel_gene_chr22_1767 TPM= 3.5 Transcript Type= NA
chr22	31439367	31489887	31439367	31489887	-	transcript1770.chr22.nic@EIF4ENIF1	transcript1770.chr22.nic	protein_coding	31489694,31488623,31471844,31468175,31463681,31462932,31458475,31455852,31455136,31454144,31450289,31449348,31448153,31447426,31444606,31442962,31441774,31440704,31439367	31489887,31488745,31471917,31468302,31463967,31463133,31458650,31455987,31455315,31454376,31450360,31449531,31448232,31447568,31444690,31443094,31442118,31440868,31440121	Gene ID= ENSG00000184708.17 TPM= 12.84 Transcript Type= NA
chr22	31454058	31489887	31454058	31489887	-	transcript1778.chr22.nic@EIF4ENIF1	transcript1778.chr22.nic	protein_coding	31489694,31488623,31471844,31468175,31463681,31462932,31458475,31455852,31455136,31454058	31489887,31488745,31471917,31468302,31463967,31463133,31458650,31455987,31455315,31454376	Gene ID= ENSG00000184708.17 TPM= 4.67 Transcript Type= NA
chr22	31439369	31489741	31439369	31489741	-	ENST00000330125.9@EIF4ENIF1	ENST00000330125.9	protein_coding	31489694,31488623,31471844,31468175,31463681,31462932,31458475,31455852,31455136,31454144,31450289,31449348,31448153,31447426,31444606,31442962,31441774,31440704,31439369	31489741,31488745,31471917,31468302,31463967,31463133,31458650,31455987,31455315,31454376,31450360,31449531,31448232,31447565,31444690,31443094,31442118,31440868,31440121	Gene ID= ENSG00000184708.17 TPM= 10.51 Transcript Type= protein_coding
chr22	31489942	31491018	31489942	31491018	+	transcript1781.chr22.nnic@NA	transcript1781.chr22.nnic	NA	31489942	31491018	Gene ID= novel_gene_chr22_1782 TPM= 2.34 Transcript Type= NA
chr22	31496133	31618548	31496133	31618548	+	transcript1786.chr22.nic@SFI1	transcript1786.chr22.nic	protein_coding	31496133,31508255,31528690,31546861,31550254,31556942,31561290,31573058,31575231,31578382,31580272,31583875,31585068,31589447,31602212,31602607,31603744,31604309,31604869,31606328,31607937,31611143,31611766,31613142,31613354,31613602,31614789,31615048,31616745,31617000,31618115,31618314	31496637,31508376,31528863,31546971,31550348,31557059,31561392,31573214,31575392,31578452,31580364,31583972,31585134,31589577,31602293,31602785,31603819,31604404,31604945,31606430,31608033,31611303,31611840,31613216,31613530,31613855,31614860,31615279,31616877,31617078,31618226,31618548	Gene ID= ENSG00000198089.15 TPM= 4.29 Transcript Type= NA
chr22	31496139	31618551	31496139	31618551	+	ENST00000540643.5@SFI1	ENST00000540643.5	protein_coding	31496139,31508255,31528690,31546861,31550254,31556942,31561290,31573058,31575231,31578382,31583875,31585068,31589447,31602212,31602607,31603744,31604309,31604869,31606328,31607937,31611143,31611766,31613142,31613354,31613602,31614789,31615048,31616745,31617000,31618115,31618314	31496637,31508376,31528863,31546971,31550348,31557059,31561392,31573214,31575392,31578452,31583972,31585134,31589577,31602293,31602785,31603819,31604404,31604945,31606430,31608033,31611303,31611840,31613216,31613530,31613855,31614860,31615279,31616877,31617078,31618226,31618551	Gene ID= ENSG00000198089.15 TPM= 3.12 Transcript Type= protein_coding
chr22	31496538	31618548	31496538	31618548	+	ENST00000400289.5@SFI1	ENST00000400289.5	protein_coding	31496538,31508259,31546861,31550254,31556942,31561290,31573058,31575231,31578382,31580272,31583875,31585068,31589447,31602212,31602607,31603744,31604309,31604869,31606328,31607937,31611143,31611766,31613142,31613354,31613602,31614789,31615048,31616745,31617000,31618115,31618314	31496637,31508376,31546971,31550348,31557059,31561392,31573214,31575392,31578452,31580364,31583972,31585134,31589577,31602293,31602785,31603819,31604404,31604945,31606430,31608033,31611303,31611840,31613216,31613530,31613855,31614860,31615279,31616877,31617078,31618226,31618548	Gene ID= ENSG00000198089.15 TPM= 3.12 Transcript Type= protein_coding
chr22	31618491	31630872	31618491	31630872	-	transcript1804.chr22.nic@PISD	transcript1804.chr22.nic	protein_coding	31630804,31625763,31623684,31621649,31621334,31620996,31620553,31618491	31630872,31626016,31623849,31621885,31621472,31621142,31620713,31619836	Gene ID= ENSG00000241878.11 TPM= 29.36 Transcript Type= NA
chr22	31618491	31638520	31618491	31638520	-	transcript1805.chr22.nic@PISD	transcript1805.chr22.nic	protein_coding	31638366,31625763,31623684,31621649,31621334,31620996,31620553,31618491	31638520,31626016,31623849,31621885,31621472,31621142,31620713,31619836	Gene ID= ENSG00000241878.11 TPM= 9.52 Transcript Type= NA
chr22	31618491	31662237	31618491	31662237	-	transcript1812.chr22.nic@PISD	transcript1812.chr22.nic	protein_coding	31662144,31650699,31648101,31621649,31620996,31620553,31618491	31662237,31650778,31648276,31621885,31621472,31620713,31619836	Gene ID= ENSG00000241878.11 TPM= 7.76 Transcript Type= NA
chr22	31618491	31662237	31618491	31662237	-	transcript1819.chr22.nic@PISD	transcript1819.chr22.nic	protein_coding	31662144,31650699,31648101,31621649,31621334,31618491	31662237,31650778,31648276,31621885,31621472,31621142	Gene ID= ENSG00000241878.11 TPM= 6.31 Transcript Type= NA
chr22	31618491	31662215	31618491	31662215	-	ENST00000460723.5@PISD	ENST00000460723.5	protein_coding	31662144,31650699,31648101,31621334,31620996,31620553,31618491	31662215,31650778,31648276,31621885,31621142,31620713,31619836	Gene ID= ENSG00000241878.11 TPM= 6.6 Transcript Type= retained_intron
chr22	31681347	31750131	31681347	31750131	-	ENST00000327423.10@PRR14L	ENST00000327423.10	protein_coding	31749993,31738387,31725538,31712083,31704655,31703550,31701656,31688156,31681347	31750131,31738911,31725610,31717291,31704726,31703721,31701762,31688227,31685803	Gene ID= ENSG00000183530.13 TPM= 30.36 Transcript Type= protein_coding
chr22	31690971	31694050	31690971	31694050	-	transcript1832.chr22.nnic@NA	transcript1832.chr22.nnic	NA	31690971	31694050	Gene ID= novel_gene_chr22_1833 TPM= 2.34 Transcript Type= NA
chr22	31944966	31957603	31944966	31957603	+	ENST00000471374.1@YWHAH	ENST00000471374.1	protein_coding	31944966,31956139	31945235,31957603	Gene ID= ENSG00000128245.14 TPM= 4.67 Transcript Type= processed_transcript
chr22	31944461	31957603	31944461	31957603	+	ENST00000248975.5@YWHAH	ENST00000248975.5	protein_coding	31944461,31956139	31944820,31957603	Gene ID= ENSG00000128245.14 TPM= 314.08 Transcript Type= protein_coding
chr22	32039490	32039896	32039490	32039896	+	ENST00000423610.1@Z74021.1	ENST00000423610.1	processed_pseudogene	32039490	32039896	Gene ID= ENSG00000232346.1 TPM= 2.34 Transcript Type= processed_pseudogene
chr22	32059170	32113002	32059170	32113002	+	ENST00000543737.2@SLC5A1	ENST00000543737.2	protein_coding	32059170,32066935,32067967,32068496,32081866,32083074,32084439,32084900,32086220,32091612,32099183,32102022,32104786,32109990	32059344,32067039,32068026,32068600,32081971,32083154,32084659,32085035,32086327,32091762,32099351,32102237,32104891,32113002	Gene ID= ENSG00000100170.9 TPM= 2.34 Transcript Type= protein_coding
chr22	32326272	32328115	32326272	32328115	-	transcript1840.chr22.nnic@NA	transcript1840.chr22.nnic	NA	32326272	32328115	Gene ID= novel_gene_chr22_1841 TPM= 2.34 Transcript Type= NA
chr22	32387582	32412255	32387582	32412255	-	ENST00000216038.5@RTCB	ENST00000216038.5	protein_coding	32412064,32408755,32408175,32406662,32401747,32399603,32397941,32396074,32395026,32393892,32392240,32387582	32412255,32408833,32408242,32406761,32401903,32399759,32398100,32396249,32395214,32394002,32392359,32388099	Gene ID= ENSG00000100220.11 TPM= 262.12 Transcript Type= protein_coding
chr22	32474676	32498829	32474676	32498829	+	ENST00000420700.5@FBXO7	ENST00000420700.5	protein_coding	32474676,32483897,32485068,32487745,32491086,32493105,32495493,32498144	32475124,32484124,32485209,32487828,32491181,32493281,32495530,32498829	Gene ID= ENSG00000100225.17 TPM= 8.84 Transcript Type= nonsense_mediated_decay
chr22	32474676	32498829	32474676	32498829	+	ENST00000266087.11@FBXO7	ENST00000266087.11	protein_coding	32474676,32478981,32483897,32485068,32487745,32491086,32493105,32495493,32498144	32475124,32479275,32484124,32485209,32487828,32491181,32493281,32495530,32498829	Gene ID= ENSG00000100225.17 TPM= 163.93 Transcript Type= protein_coding
chr22	32474798	32498829	32474798	32498829	+	ENST00000425028.5@FBXO7	ENST00000425028.5	protein_coding	32474798,32479133,32483897,32485068,32487745,32491086,32493105,32495493,32498144	32475124,32479275,32484124,32485209,32487828,32491181,32493281,32495530,32498829	Gene ID= ENSG00000100225.17 TPM= 20.9 Transcript Type= nonsense_mediated_decay
chr22	32475257	32498829	32475257	32498829	+	ENST00000397426.5@FBXO7	ENST00000397426.5	protein_coding	32475257,32478981,32483897,32485068,32487745,32491086,32493105,32495493,32498144	32475398,32479275,32484124,32485209,32487828,32491181,32493281,32495530,32498829	Gene ID= ENSG00000100225.17 TPM= 84.53 Transcript Type= protein_coding
chr22	32801701	32863043	32801701	32863043	+	ENST00000266085.6@TIMP3	ENST00000266085.6	protein_coding	32801701,32849452,32857249,32858017,32859180	32802122,32849534,32857360,32858138,32863043	Gene ID= ENSG00000100234.11 TPM= 1110.97 Transcript Type= protein_coding
chr22	32802458	32805633	32802458	32805633	-	transcript1899.chr22.nnic@NA	transcript1899.chr22.nnic	NA	32802458	32805633	Gene ID= novel_gene_chr22_1900 TPM= 9.34 Transcript Type= NA
chr22	32814131	32817074	32814131	32817074	+	transcript1893.chr22.nnic@NA	transcript1893.chr22.nnic	NA	32814131	32817074	Gene ID= novel_gene_chr22_1894 TPM= 7.01 Transcript Type= NA
chr22	32832543	32838755	32832543	32838755	-	transcript1897.chr22.nnic@NA	transcript1897.chr22.nnic	NA	32832543	32838755	Gene ID= novel_gene_chr22_1898 TPM= 30.36 Transcript Type= NA
chr22	33273076	33920428	33273076	33920428	-	ENST00000397394.6@LARGE1	ENST00000397394.6	protein_coding	33919995,33761371,33650367,33626244,33604435,33564848,33432161,33384192,33381919,33337646,33316085,33304229,33283202,33277060,33273076	33920428,33761558,33650668,33626326,33604558,33565019,33432265,33384304,33382044,33337801,33316248,33304507,33283348,33277255,33274624	Gene ID= ENSG00000133424.20 TPM= 16.35 Transcript Type= protein_coding
chr22	33365618	33369773	33365618	33369773	-	transcript1904.chr22.nnic@NA	transcript1904.chr22.nnic	NA	33365618	33369773	Gene ID= novel_gene_chr22_1905 TPM= 2.34 Transcript Type= NA
chr22	35257487	35295807	35257487	35295807	+	ENST00000418170.5@HMGXB4	ENST00000418170.5	protein_coding	35257487,35262323,35263078,35263796,35263982,35264648,35283962,35285997,35287347,35288238,35292992,35293607	35257557,35262421,35263226,35263874,35264096,35265603,35284043,35286061,35287452,35288407,35293114,35295807	Gene ID= ENSG00000100281.13 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr22	35257482	35295807	35257482	35295807	+	transcript1907.chr22.nic@HMGXB4	transcript1907.chr22.nic	protein_coding	35257482,35263078,35263796,35263982,35264648,35283962,35285997,35287347,35288238,35292992,35293607	35257557,35263226,35263874,35264096,35265603,35284043,35286061,35287452,35288407,35293114,35295807	Gene ID= ENSG00000100281.13 TPM= 3.5 Transcript Type= NA
chr22	35257482	35295807	35257482	35295807	+	transcript1909.chr22.nic@HMGXB4	transcript1909.chr22.nic	protein_coding	35257482,35263078,35263796,35264648,35283962,35285997,35287347,35288238,35292992,35293607	35257557,35263226,35263874,35265603,35284043,35286061,35287452,35288407,35293114,35295807	Gene ID= ENSG00000100281.13 TPM= 7.01 Transcript Type= NA
chr22	35257452	35265570	35257452	35265570	+	ENST00000420166.5@HMGXB4	ENST00000420166.5	protein_coding	35257452,35263078,35263796,35264648	35257557,35263226,35263874,35265570	Gene ID= ENSG00000100281.13 TPM= 2.34 Transcript Type= protein_coding
chr22	35257496	35265567	35257496	35265567	+	ENST00000455359.5@HMGXB4	ENST00000455359.5	protein_coding	35257496,35263078,35263796,35263982,35264648	35257557,35263226,35263874,35264096,35265567	Gene ID= ENSG00000100281.13 TPM= 1.17 Transcript Type= protein_coding
chr22	35257498	35295764	35257498	35295764	+	ENST00000216106.5@HMGXB4	ENST00000216106.5	protein_coding	35257498,35262323,35263078,35263796,35264648,35283962,35285997,35287347,35288238,35292992,35293607	35257557,35262421,35263226,35263874,35265603,35284043,35286061,35287452,35288407,35293114,35295764	Gene ID= ENSG00000100281.13 TPM= 1.17 Transcript Type= protein_coding
chr22	35299804	35347994	35299804	35347994	+	ENST00000449058.6@TOM1	ENST00000449058.6	protein_coding	35299804,35317877,35321959,35323028,35323496,35323768,35327271,35330347,35332981,35333404,35334328,35338713,35345725,35346930,35347055	35299980,35317961,35322037,35323177,35323630,35323914,35327387,35330480,35333014,35333497,35334448,35338788,35345784,35346969,35347994	Gene ID= ENSG00000100284.20 TPM= 272.67 Transcript Type= protein_coding
chr22	35299822	35347973	35299822	35347973	+	transcript1930.chr22.nnic@TOM1	transcript1930.chr22.nnic	protein_coding	35299822,35317877,35323028,35323496,35323768,35327271,35330347,35332981,35333404,35334328,35338713,35345725,35346930,35347055	35299980,35317961,35323177,35323630,35323914,35327387,35330480,35333014,35333497,35334448,35338788,35345784,35346969,35347973	Gene ID= ENSG00000100284.20 TPM= 24.95 Transcript Type= NA
chr22	35380835	35394214	35380835	35394214	+	ENST00000216117.8@HMOX1	ENST00000216117.8	protein_coding	35380835,35383106,35386685,35389864,35393468	35381196,35383226,35387176,35389963,35394214	Gene ID= ENSG00000100292.16 TPM= 45.54 Transcript Type= protein_coding
chr22	35400063	35425430	35400063	35425430	+	ENST00000216122.8@MCM5	ENST00000216122.8	protein_coding	35400063,35400431,35403207,35403414,35406553,35408408,35410744,35412510,35413875,35415829,35416339,35416638,35417744,35419884,35421318,35423214,35424154	35400208,35400605,35403333,35403542,35406725,35408563,35410910,35412681,35413986,35415972,35416404,35416814,35417856,35420012,35421460,35423341,35425430	Gene ID= ENSG00000100297.15 TPM= 49.62 Transcript Type= protein_coding
chr22	35400084	35424500	35400084	35424500	+	transcript1945.chr22.nic@MCM5	transcript1945.chr22.nic	protein_coding	35400084,35400431,35403207,35403414,35406553,35408408,35410744,35412510,35413875,35415829,35416339,35416638,35417744,35419884,35421318,35423214	35400208,35400605,35403333,35403542,35406725,35408563,35410910,35412681,35413986,35415972,35416404,35416814,35417856,35420012,35421460,35424500	Gene ID= ENSG00000100297.15 TPM= 6.42 Transcript Type= NA
chr22	35540868	35554001	35540868	35554001	+	ENST00000216127.4@RASD2	ENST00000216127.4	protein_coding	35540868,35546801,35551503	35541500,35547080,35554001	Gene ID= ENSG00000100302.6 TPM= 7.01 Transcript Type= protein_coding
chr22	35661065	35664895	35661065	35664895	+	transcript1956.chr22.nnic@NA	transcript1956.chr22.nnic	NA	35661065	35664895	Gene ID= novel_gene_chr22_1957 TPM= 9.34 Transcript Type= NA
chr22	35743933	36028826	35743933	36028826	-	transcript1965.chr22.nic@RBFOX2	transcript1965.chr22.nic	protein_coding	36028240,35938847,35809780,35781600,35778025,35768257,35765423,35761415,35761202,35759888,35756105,35746473,35745923,35743933	36028826,35938897,35810004,35781743,35778078,35768349,35765483,35761468,35761294,35760020,35756144,35746561,35745995,35744249	Gene ID= ENSG00000100320.22 TPM= 2.34 Transcript Type= NA
chr22	35738736	35840587	35738736	35840587	-	ENST00000405409.6@RBFOX2	ENST00000405409.6	protein_coding	35840192,35809780,35781600,35778025,35768257,35765423,35761415,35761202,35759888,35746473,35745923,35738736	35840587,35810004,35781746,35778078,35768349,35765483,35761468,35761294,35760020,35746561,35745995,35744249	Gene ID= ENSG00000100320.22 TPM= 43.2 Transcript Type= protein_coding
chr22	36140330	36160929	36140330	36160929	-	ENST00000422426.5@APOL3	ENST00000422426.5	protein_coding	36160669,36149259,36149046,36145473,36140330	36160929,36149371,36149142,36145599,36142058	Gene ID= ENSG00000128284.19 TPM= 5.84 Transcript Type= nonsense_mediated_decay
chr22	36140330	36156949	36140330	36156949	-	transcript1984.chr22.nic@APOL3	transcript1984.chr22.nic	protein_coding	36156844,36149046,36145473,36140330	36156949,36149142,36145599,36142058	Gene ID= ENSG00000128284.19 TPM= 7.01 Transcript Type= NA
chr22	36140330	36160929	36140330	36160929	-	ENST00000432700.5@APOL3	ENST00000432700.5	protein_coding	36160669,36149046,36145473,36140330	36160929,36149371,36145599,36142058	Gene ID= ENSG00000128284.19 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chr22	36140330	36160929	36140330	36160929	-	ENST00000349314.6@APOL3	ENST00000349314.6	protein_coding	36160669,36145473,36140330	36160929,36145599,36142058	Gene ID= ENSG00000128284.19 TPM= 5.84 Transcript Type= protein_coding
chr22	36156115	36160810	36156115	36160810	-	transcript1989.chr22.nnic@NA	transcript1989.chr22.nnic	NA	36156115	36160810	Gene ID= novel_gene_chr22_1990 TPM= 3.5 Transcript Type= NA
chr22	36189129	36204840	36189129	36204840	-	ENST00000616056.4@APOL4	ENST00000616056.4	protein_coding	36204628,36201993,36201700,36199330,36195311,36189129	36204840,36202055,36201888,36199376,36195437,36191912	Gene ID= ENSG00000100336.17 TPM= 8.17 Transcript Type= protein_coding
chr22	36226203	36239643	36226203	36239643	-	ENST00000358502.9@APOL2	ENST00000358502.9	protein_coding	36239441,36233402,36233153,36231340,36226203	36239643,36233455,36233241,36231466,36228280	Gene ID= ENSG00000128335.13 TPM= 5.84 Transcript Type= protein_coding
chr22	36226624	36236709	36226624	36236709	-	transcript2002.chr22.nic@APOL2	transcript2002.chr22.nic	protein_coding	36233402,36233153,36231340,36226624	36236709,36233241,36231466,36228280	Gene ID= ENSG00000128335.13 TPM= 2.34 Transcript Type= NA
chr22	36252994	36267525	36252994	36267525	+	transcript2006.chr22.nnic@APOL1	transcript2006.chr22.nnic	protein_coding	36252994,36254937,36257083,36257319,36261596,36265151,36266786	36253219,36254999,36257136,36257407,36261722,36266032,36267525	Gene ID= ENSG00000100342.20 TPM= 4.67 Transcript Type= NA
chr22	36253090	36267525	36253090	36267525	+	transcript2009.chr22.nnic@APOL1	transcript2009.chr22.nnic	protein_coding	36253090,36254937,36257083,36257319,36261596,36265151,36266889	36253219,36254999,36257136,36257407,36261722,36266108,36267525	Gene ID= ENSG00000100342.20 TPM= 6.42 Transcript Type= NA
chr22	36252994	36267525	36252994	36267525	+	transcript2011.chr22.nnic@APOL1	transcript2011.chr22.nnic	protein_coding	36252994,36254937,36257083,36257319,36261596,36265151,36266835	36253219,36254999,36257136,36257407,36261722,36266135,36267525	Gene ID= ENSG00000100342.20 TPM= 18.68 Transcript Type= NA
chr22	36253112	36267525	36253112	36267525	+	transcript2017.chr22.nnic@APOL1	transcript2017.chr22.nnic	protein_coding	36253112,36254937,36257083,36257319,36261596,36265151,36266691	36253219,36254999,36257136,36257407,36261722,36266271,36267525	Gene ID= ENSG00000100342.20 TPM= 4.67 Transcript Type= NA
chr22	36253099	36267525	36253099	36267525	+	transcript2024.chr22.nnic@APOL1	transcript2024.chr22.nnic	protein_coding	36253099,36254937,36257319,36261596,36265151,36266889	36253219,36254999,36257407,36261722,36266108,36267525	Gene ID= ENSG00000100342.20 TPM= 2.92 Transcript Type= NA
chr22	36253090	36267525	36253090	36267525	+	transcript2025.chr22.nnic@APOL1	transcript2025.chr22.nnic	protein_coding	36253090,36254937,36257319,36261596,36265151,36266835	36253219,36254999,36257407,36261722,36266135,36267525	Gene ID= ENSG00000100342.20 TPM= 3.5 Transcript Type= NA
chr22	36281281	36388018	36281281	36388018	-	ENST00000216181.9@MYH9	ENST00000216181.9	protein_coding	36387807,36348904,36341370,36327461,36326568,36322429,36321758,36320798,36320220,36319540,36318207,36316517,36314145,36312049,36309282,36306414,36305930,36305033,36303995,36302568,36301534,36300851,36300127,36298919,36296843,36295505,36294932,36294092,36293759,36293329,36291986,36289085,36288727,36288252,36286718,36285865,36285658,36285121,36284403,36284093,36281281	36388018,36349255,36341526,36327488,36326661,36322521,36321821,36320896,36320363,36319635,36318325,36316669,36314318,36312222,36309396,36306607,36306051,36305102,36304155,36302676,36301665,36301057,36300264,36299042,36297014,36295717,36295076,36294298,36293863,36293481,36292234,36289297,36288939,36288413,36286846,36285953,36285781,36285329,36284511,36284265,36282785	Gene ID= ENSG00000100345.20 TPM= 1189.78 Transcript Type= protein_coding
chr22	36467046	36481634	36467046	36481634	-	ENST00000416967.1@TXN2	ENST00000416967.1	protein_coding	36481564,36480575,36476733,36467046	36481634,36480787,36476856,36467917	Gene ID= ENSG00000100348.9 TPM= 30.56 Transcript Type= protein_coding
chr22	36467036	36482030	36467036	36482030	-	ENST00000216185.6@TXN2	ENST00000216185.6	protein_coding	36481564,36480575,36476733,36467036	36482030,36480837,36476856,36467917	Gene ID= ENSG00000100348.9 TPM= 156.69 Transcript Type= protein_coding
chr22	36467046	36481648	36467046	36481648	-	transcript2072.chr22.nnic@TXN2	transcript2072.chr22.nnic	protein_coding	36481564,36480575,36467046	36481648,36480837,36467917	Gene ID= ENSG00000100348.9 TPM= 6.85 Transcript Type= NA
chr22	36510850	36529194	36510850	36529194	-	transcript2081.chr22.nic@EIF3D	transcript2081.chr22.nic	protein_coding	36529076,36526820,36525999,36525664,36524596,36523895,36523209,36520576,36519405,36518763,36517301,36516705,36516478,36512460,36511503,36510850	36529194,36526905,36526131,36525709,36524732,36523980,36523281,36520688,36519537,36518910,36517431,36516790,36516607,36512602,36511786,36511000	Gene ID= ENSG00000100353.17 TPM= 20.23 Transcript Type= NA
chr22	36510850	36529436	36510850	36529436	-	ENST00000216190.12@EIF3D	ENST00000216190.12	protein_coding	36529076,36525999,36525664,36524596,36523895,36523209,36520576,36519405,36518763,36517301,36516705,36516478,36512460,36511503,36510850	36529436,36526131,36525709,36524732,36523980,36523281,36520688,36519537,36518910,36517431,36516790,36516607,36512602,36511786,36511000	Gene ID= ENSG00000100353.17 TPM= 258.42 Transcript Type= protein_coding
chr22	36772403	36776256	36772403	36776256	-	ENST00000476548.1@IFT27	ENST00000476548.1	protein_coding	36775674,36772403	36776256,36772721	Gene ID= ENSG00000100360.14 TPM= 1.17 Transcript Type= processed_transcript
chr22	36758203	36776133	36758203	36776133	-	ENST00000433985.6@IFT27	ENST00000433985.6	protein_coding	36775674,36767783,36767306,36766138,36763919,36762904,36758203	36776133,36767862,36767365,36766197,36764036,36763013,36758409	Gene ID= ENSG00000100360.14 TPM= 39.7 Transcript Type= protein_coding
chr22	36800684	36817035	36800684	36817035	-	ENST00000417718.6@PVALB	ENST00000417718.6	protein_coding	36816945,36815103,36813646,36800684	36817035,36815235,36813755,36800918	Gene ID= ENSG00000100362.12 TPM= 2.34 Transcript Type= protein_coding
chr22	36860988	36878015	36860988	36878015	+	ENST00000248899.10@NCF4	ENST00000248899.10	protein_coding	36860988,36864045,36864919,36867392,36870415,36871652,36872327,36875653,36876029,36877628	36861203,36864129,36865072,36867462,36870542,36871709,36872425,36875783,36876094,36878015	Gene ID= ENSG00000100365.14 TPM= 38.53 Transcript Type= protein_coding
chr22	36860988	36878015	36860988	36878015	+	ENST00000397147.6@NCF4	ENST00000397147.6	protein_coding	36860988,36864045,36864919,36867392,36870415,36871652,36872327,36875653,36877628	36861203,36864129,36865072,36867462,36870542,36871709,36872425,36876094,36878015	Gene ID= ENSG00000100365.14 TPM= 17.51 Transcript Type= protein_coding
chr22	36913628	36940449	36913628	36940449	+	ENST00000403662.7@CSF2RB	ENST00000403662.7	protein_coding	36913628,36922036,36923244,36925987,36929402,36929639,36930375,36930673,36932765,36933832,36935351,36935630,36936549,36937377	36913677,36922283,36923367,36926177,36929559,36929807,36930510,36930830,36932904,36933994,36935441,36935687,36936652,36940449	Gene ID= ENSG00000100368.13 TPM= 144.78 Transcript Type= protein_coding
chr22	37010859	37019527	37010859	37019527	-	ENST00000249042.7@TST	ENST00000249042.7	protein_coding	37019400,37018138,37010859	37019527,37018753,37011325	Gene ID= ENSG00000128311.13 TPM= 14.59 Transcript Type= protein_coding
chr22	37010859	37019467	37010859	37019467	-	ENST00000403892.7@TST	ENST00000403892.7	protein_coding	37018138,37010859	37019467,37011325	Gene ID= ENSG00000128311.13 TPM= 9.92 Transcript Type= protein_coding
chr22	37010863	37014054	37010863	37014054	-	transcript2129.chr22.nnic@NA	transcript2129.chr22.nnic	NA	37010863	37014054	Gene ID= novel_gene_chr22_2130 TPM= 2.34 Transcript Type= NA
chr22	37019746	37029815	37019746	37029815	+	transcript2107.chr22.nnic@MPST	transcript2107.chr22.nnic	protein_coding	37019746,37024192,37026999,37029216	37019872,37024810,37027095,37029815	Gene ID= ENSG00000128309.16 TPM= 14.57 Transcript Type= NA
chr22	37019768	37029822	37019768	37029822	+	ENST00000429360.5@MPST	ENST00000429360.5	protein_coding	37019768,37024192,37029216	37019872,37024810,37029822	Gene ID= ENSG00000128309.16 TPM= 177.07 Transcript Type= protein_coding
chr22	37019768	37029819	37019768	37029819	+	ENST00000341116.7@MPST	ENST00000341116.7	protein_coding	37019768,37023752,37024192,37029216	37019872,37023927,37024810,37029819	Gene ID= ENSG00000128309.16 TPM= 61.47 Transcript Type= protein_coding
chr22	37051726	37063389	37051726	37063389	+	transcript2134.chr22.nic@KCTD17	transcript2134.chr22.nic	protein_coding	37051726,37053100,37056320,37057398,37059313,37060823	37051949,37053208,37056411,37057493,37059438,37063389	Gene ID= ENSG00000100379.17 TPM= 4.67 Transcript Type= NA
chr22	37051739	37063390	37051739	37063390	+	ENST00000402077.7@KCTD17	ENST00000402077.7	protein_coding	37051739,37053100,37056320,37057398,37059313,37060823,37061539,37062525	37051949,37053208,37056411,37057493,37059438,37060922,37061629,37063390	Gene ID= ENSG00000100379.17 TPM= 16.35 Transcript Type= protein_coding
chr22	37051739	37063390	37051739	37063390	+	ENST00000403888.7@KCTD17	ENST00000403888.7	protein_coding	37051739,37053100,37056320,37057398,37059313,37060823,37061104,37061539,37062525	37051949,37053208,37056411,37057493,37059438,37060922,37061175,37061629,37063390	Gene ID= ENSG00000100379.17 TPM= 7.01 Transcript Type= protein_coding
chr22	37051736	37063389	37051736	37063389	+	ENST00000610767.4@KCTD17	ENST00000610767.4	protein_coding	37051736,37053100,37056320,37057398,37059313,37062525	37051949,37053208,37056411,37057493,37059438,37063389	Gene ID= ENSG00000100379.17 TPM= 5.84 Transcript Type= protein_coding
chr22	37065436	37103656	37065436	37103656	-	ENST00000346753.7@TMPRSS6	ENST00000346753.7	protein_coding	37103514,37103216,37098416,37096648,37095906,37095551,37089578,37086283,37084727,37084295,37075135,37074610,37073532,37070916,37070484,37069073,37066826,37065436	37103656,37103418,37098549,37096715,37096090,37095592,37089782,37086419,37084839,37084404,37075280,37074708,37073645,37071032,37070652,37069344,37066962,37066238	Gene ID= ENSG00000187045.16 TPM= 3.5 Transcript Type= protein_coding
chr22	37225261	37244270	37225261	37244270	-	ENST00000249071.10@RAC2	ENST00000249071.10	protein_coding	37244114,37241587,37232801,37231932,37231231,37226671,37225261	37244270,37241658,37232918,37231994,37231390,37226803,37226039	Gene ID= ENSG00000128340.14 TPM= 147.12 Transcript Type= protein_coding
chr22	37282383	37315345	37282383	37315345	+	ENST00000248901.10@CYTH4	ENST00000248901.10	protein_coding	37282383,37292621,37294660,37295999,37297564,37299226,37300907,37303254,37309212,37310988,37311456,37312020,37313439	37282588,37292703,37294724,37296065,37297682,37299306,37301019,37303402,37309323,37311064,37311527,37312174,37315345	Gene ID= ENSG00000100055.20 TPM= 47.49 Transcript Type= protein_coding
chr22	37282470	37315341	37282470	37315341	+	transcript2151.chr22.nic@CYTH4	transcript2151.chr22.nic	protein_coding	37282470,37292621,37294660,37295999,37297564,37299226,37300907,37303254,37309212,37310988,37311456,37313439	37282588,37292703,37294724,37296065,37297682,37299306,37301019,37303402,37309323,37311064,37312174,37315341	Gene ID= ENSG00000100055.20 TPM= 10.12 Transcript Type= NA
chr22	37282525	37315341	37282525	37315341	+	ENST00000462927.5@CYTH4	ENST00000462927.5	protein_coding	37282525,37292621,37294660,37295999,37297564,37299226,37300907,37303254,37304172,37309212,37310988,37311456,37313439	37282588,37292703,37294724,37296065,37297682,37299306,37301019,37303402,37304286,37309323,37311064,37312174,37315341	Gene ID= ENSG00000100055.20 TPM= 8.96 Transcript Type= retained_intron
chr22	37469068	37486407	37469068	37486407	-	transcript2160.chr22.nic@MFNG	transcript2160.chr22.nic	protein_coding	37485923,37480721,37480197,37479345,37476896,37474512,37472443,37469942,37469068	37486407,37480769,37480299,37479498,37476981,37474677,37472528,37470029,37469312	Gene ID= ENSG00000100060.17 TPM= 4.67 Transcript Type= NA
chr22	37464541	37486565	37464541	37486565	-	transcript2161.chr22.nnic@MFNG	transcript2161.chr22.nnic	protein_coding	37485923,37480721,37480197,37479345,37476896,37474512,37472443,37464541	37486565,37480769,37480299,37479498,37476981,37474677,37472528,37465718	Gene ID= ENSG00000100060.17 TPM= 4.67 Transcript Type= NA
chr22	37469065	37486408	37469065	37486408	-	transcript2171.chr22.nic@MFNG	transcript2171.chr22.nic	protein_coding	37485923,37480197,37479345,37476896,37474512,37472443,37469065	37486408,37480299,37479498,37476981,37474677,37472528,37470029	Gene ID= ENSG00000100060.17 TPM= 16.58 Transcript Type= NA
chr22	37469065	37486401	37469065	37486401	-	ENST00000356998.7@MFNG	ENST00000356998.7	protein_coding	37485923,37480721,37480197,37479345,37476896,37474512,37472443,37469065	37486401,37480769,37480299,37479498,37476981,37474677,37472528,37470029	Gene ID= ENSG00000100060.17 TPM= 168.37 Transcript Type= protein_coding
chr22	37469063	37486387	37469063	37486387	-	ENST00000416983.7@MFNG	ENST00000416983.7	protein_coding	37485916,37480197,37479345,37476896,37474512,37472443,37469063	37486387,37480299,37479498,37476981,37474677,37472528,37470029	Gene ID= ENSG00000100060.17 TPM= 16.58 Transcript Type= protein_coding
chr22	37490362	37519542	37490362	37519542	-	ENST00000403299.5@CARD10	ENST00000403299.5	protein_coding	37519343,37518966,37517971,37515973,37510212,37508527,37507829,37506192,37504635,37504186,37503185,37502602,37497019,37496449,37495760,37495517,37494086,37492644,37492435,37491755,37490362	37519542,37519217,37518108,37516298,37510421,37508682,37507954,37506383,37504769,37504301,37503213,37502725,37497178,37496560,37496003,37495586,37494188,37492802,37492550,37491867,37491393	Gene ID= ENSG00000100065.14 TPM= 50.21 Transcript Type= protein_coding
chr22	37560447	37569405	37560447	37569405	+	ENST00000249014.4@CDC42EP1	ENST00000249014.4	protein_coding	37560447,37566072,37568108	37560588,37566812,37569405	Gene ID= ENSG00000128283.6 TPM= 126.1 Transcript Type= protein_coding
chr22	37570246	37580080	37570246	37580080	-	ENST00000215886.5@LGALS2	ENST00000215886.5	protein_coding	37579900,37571849,37570576,37570246	37580080,37571931,37570735,37570412	Gene ID= ENSG00000100079.6 TPM= 2.34 Transcript Type= protein_coding
chr22	37608475	37633564	37608475	37633564	+	ENST00000343632.8@GGA1	ENST00000343632.8	protein_coding	37608475,37614190,37616922,37618448,37620238,37620813,37621616,37623327,37623552,37624969,37625797,37629462,37629998,37630903,37631996,37632405,37632601	37608903,37614274,37616997,37618546,37620361,37620913,37621696,37623467,37623633,37625076,37625949,37629526,37630170,37631099,37632165,37632515,37633564	Gene ID= ENSG00000100083.18 TPM= 64.22 Transcript Type= protein_coding
chr22	37608821	37633564	37608821	37633564	+	transcript2196.chr22.nnic@GGA1	transcript2196.chr22.nnic	protein_coding	37608821,37614190,37616922,37618448,37620238,37620813,37621616,37623327,37623552,37624969,37629462,37629998,37630903,37631996,37632405,37632601	37608903,37614274,37616997,37618546,37620361,37620913,37621696,37623467,37623633,37625076,37629526,37630170,37631099,37632165,37632515,37633564	Gene ID= ENSG00000100083.18 TPM= 18.68 Transcript Type= NA
chr22	37608847	37624468	37608847	37624468	+	transcript2203.chr22.nic@GGA1	transcript2203.chr22.nic	protein_coding	37608847,37614190,37616922,37618448,37620238,37620813,37621616,37623327,37623552	37608903,37614274,37616997,37618546,37620361,37620913,37621696,37623467,37624468	Gene ID= ENSG00000100083.18 TPM= 2.34 Transcript Type= NA
chr22	37608830	37618146	37608830	37618146	+	ENST00000489772.5@GGA1	ENST00000489772.5	protein_coding	37608830,37614190,37616922	37608903,37614274,37618146	Gene ID= ENSG00000100083.18 TPM= 9.34 Transcript Type= retained_intron
chr22	37608845	37633564	37608845	37633564	+	ENST00000325180.12@GGA1	ENST00000325180.12	protein_coding	37608845,37614190,37616922,37618448,37620238,37620813,37621616,37623327,37623552,37629462,37629998,37630903,37631996,37632405,37632601	37608903,37614274,37616997,37618546,37620361,37620913,37621696,37623467,37623633,37629526,37630170,37631099,37632165,37632515,37633564	Gene ID= ENSG00000100083.18 TPM= 19.85 Transcript Type= protein_coding
chr22	37639652	37656042	37639652	37656042	+	transcript2208.chr22.nic@SH3BP1	transcript2208.chr22.nic	protein_coding	37639652,37641126,37641374,37642539,37642895,37643098,37643644,37644637,37644870,37645365,37646818,37647267,37647441,37648319,37650152,37650542,37653779,37655272,37655926	37639846,37641168,37641478,37642615,37643006,37643174,37643788,37644705,37644960,37645510,37646929,37647348,37647521,37648435,37650249,37650725,37653873,37655315,37656042	Gene ID= ENSG00000100092.20 TPM= 2.34 Transcript Type= NA
chr22	37639475	37656117	37639475	37656117	+	ENST00000357436.4@SH3BP1	ENST00000357436.4	protein_coding	37639475,37641126,37641374,37642539,37642895,37643098,37643644,37644637,37644870,37645365,37646818,37647267,37647441,37648319,37650152,37650542,37653779,37655272	37639846,37641168,37641478,37642615,37643006,37643174,37643788,37644705,37644960,37645510,37646929,37647348,37647521,37648435,37650249,37650725,37653873,37656117	Gene ID= ENSG00000100092.20 TPM= 3.5 Transcript Type= protein_coding
chr22	37639652	37656112	37639652	37656112	+	transcript2212.chr22.nic@SH3BP1	transcript2212.chr22.nic	protein_coding	37639652,37641126,37641374,37642539,37642895,37643098,37643644,37644637,37644870,37645365,37646818,37647267,37647441,37648319,37650152,37650542,37653779,37655926	37639846,37641168,37641478,37642615,37643006,37643174,37643788,37644705,37644960,37645510,37646929,37647348,37647521,37648435,37650249,37650725,37653873,37656112	Gene ID= ENSG00000100092.20 TPM= 2.34 Transcript Type= NA
chr22	37639457	37656043	37639457	37656043	+	transcript2213.chr22.nic@SH3BP1	transcript2213.chr22.nic	protein_coding	37639457,37641374,37642539,37642895,37643098,37643644,37644637,37644870,37645365,37646818,37647267,37647441,37648319,37650152,37650542,37653779,37655272	37639846,37641478,37642615,37643006,37643174,37643788,37644705,37644960,37645510,37646929,37647348,37647521,37648435,37650249,37650725,37653873,37656043	Gene ID= ENSG00000100092.20 TPM= 2.34 Transcript Type= NA
chr22	37639693	37666932	37639693	37666932	+	ENST00000451997.5@SH3BP1	ENST00000451997.5	protein_coding	37639693,37641374,37642539,37642895,37643098,37643644,37644637,37644870,37645365,37646818,37647267,37647441,37648319,37650152,37650542,37653779,37665555	37639846,37641478,37642615,37643006,37643174,37643788,37644705,37644960,37645510,37646929,37647348,37647521,37648435,37650249,37650725,37653873,37666932	Gene ID= ENSG00000100092.20 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr22	37658727	37666934	37658727	37666934	+	ENST00000215904.6@PDXP	ENST00000215904.6	protein_coding	37658727,37665555	37659356,37666934	Gene ID= ENSG00000241360.1 TPM= 32.69 Transcript Type= protein_coding
chr22	37675608	37679806	37675608	37679806	+	ENST00000215909.9@LGALS1	ENST00000215909.9	protein_coding	37675608,37676986,37678483,37679603	37675711,37677065,37678654,37679806	Gene ID= ENSG00000100097.11 TPM= 170.47 Transcript Type= protein_coding
chr22	37675657	37679802	37675657	37679802	+	ENST00000425542.5@LGALS1	ENST00000425542.5	protein_coding	37675657,37676856,37678483,37679603	37675711,37677065,37678654,37679802	Gene ID= ENSG00000100097.11 TPM= 10.51 Transcript Type= nonsense_mediated_decay
chr22	37686323	37693476	37686323	37693476	+	ENST00000438329.5@NOL12	ENST00000438329.5	protein_coding	37686323,37687910,37688312,37688850,37690697,37691174,37693332	37686475,37688015,37688360,37688992,37690794,37691424,37693476	Gene ID= ENSG00000273899.4 TPM= 23.35 Transcript Type= nonsense_mediated_decay
chr22	37686326	37693471	37686326	37693471	+	transcript2221.chr22.nnic@NOL12	transcript2221.chr22.nnic	protein_coding	37686326,37687910,37688312,37688850,37690697,37691174,37693332	37686475,37688015,37688360,37688992,37690794,37692026,37693471	Gene ID= ENSG00000273899.4 TPM= 3.5 Transcript Type= NA
chr22	37686323	37693478	37686323	37693478	+	ENST00000359114.8@NOL12	ENST00000359114.8	protein_coding	37686323,37687910,37688312,37688850,37690697,37691174	37686475,37688015,37688360,37688992,37690794,37693478	Gene ID= ENSG00000273899.4 TPM= 16.35 Transcript Type= protein_coding
chr22	37686360	37693471	37686360	37693471	+	ENST00000611699.1@NOL12	ENST00000611699.1	protein_coding	37686360,37687910,37688312,37688850,37690697,37691174,37693332	37686475,37688015,37688360,37688992,37690794,37691424,37693471	Gene ID= ENSG00000273899.4 TPM= 3.5 Transcript Type= protein_coding
chr22	37746206	37774509	37746206	37774509	+	transcript2249.chr22.nnic@TRIOBP	transcript2249.chr22.nnic	protein_coding	37746206,37751772,37754916,37755101,37755550,37757613,37759154,37765670,37768074,37769028,37769262,37771650,37772601,37773783	37746420,37751828,37754984,37755190,37755659,37758138,37759264,37765817,37768176,37769187,37769375,37771736,37772764,37774509	Gene ID= ENSG00000100106.19 TPM= 20.43 Transcript Type= NA
chr22	37746233	37774140	37746233	37774140	+	ENST00000403663.6@TRIOBP	ENST00000403663.6	protein_coding	37746233,37751772,37754877,37755101,37755550,37757613,37759154,37765670,37768074,37769028,37769262,37771650,37772601,37773783	37746420,37751828,37754984,37755190,37755659,37758138,37759264,37765817,37768176,37769187,37769375,37771736,37772764,37774140	Gene ID= ENSG00000100106.19 TPM= 322.26 Transcript Type= protein_coding
chr22	37770738	37774138	37770738	37774138	+	transcript2275.chr22.nnic@NA	transcript2275.chr22.nnic	NA	37770738	37774138	Gene ID= novel_gene_chr22_2276 TPM= 3.5 Transcript Type= NA
chr22	37805093	37807436	37805093	37807436	+	ENST00000340857.3@H1F0	ENST00000340857.3	protein_coding	37805093	37807436	Gene ID= ENSG00000189060.5 TPM= 51.37 Transcript Type= protein_coding
chr22	37807912	37816899	37807912	37816899	+	ENST00000248924.10@GCAT	ENST00000248924.10	protein_coding	37807912,37810027,37812887,37813463,37815126,37815418,37815663,37816200,37816567	37808163,37810157,37812988,37813609,37815280,37815500,37815834,37816321,37816899	Gene ID= ENSG00000100116.16 TPM= 21.02 Transcript Type= protein_coding
chr22	37830762	37834727	37830762	37834727	-	transcript2289.chr22.nic@ANKRD54	transcript2289.chr22.nic	protein_coding	37832637,37830762	37834727,37832017	Gene ID= ENSG00000100124.14 TPM= 5.84 Transcript Type= NA
chr22	37830855	37844431	37830855	37844431	-	ENST00000215941.8@ANKRD54	ENST00000215941.8	protein_coding	37843911,37840187,37838500,37833684,37833159,37832958,37832637,37830855	37844431,37840234,37838598,37833755,37833206,37833082,37832744,37832017	Gene ID= ENSG00000100124.14 TPM= 58.38 Transcript Type= protein_coding
chr22	37849372	37888782	37849372	37888782	+	ENST00000624234.3@EIF3L	ENST00000624234.3	protein_coding	37849372,37850015,37851280,37855565,37858679,37862969,37863272,37870176,37874370,37875841,37877674,37886765,37888426	37849482,37850063,37851490,37855644,37858740,37863038,37863345,37870347,37874524,37876011,37878171,37886845,37888782	Gene ID= ENSG00000100129.17 TPM= 478.16 Transcript Type= protein_coding
chr22	37906329	37942009	37906329	37942009	+	transcript2312.chr22.nic@MICALL1	transcript2312.chr22.nic	protein_coding	37906329,37911952,37912351,37917707,37919036,37921972,37924660,37925661,37927411,37931799,37932553,37932798,37933039,37937080,37937746,37940709	37906568,37912000,37912492,37917795,37919178,37922426,37924717,37926043,37927826,37931933,37932679,37932888,37933112,37937194,37937819,37942009	Gene ID= ENSG00000100139.13 TPM= 8.17 Transcript Type= NA
chr22	37942708	37945474	37942708	37945474	-	transcript2316.chr22.nnic@NA	transcript2316.chr22.nnic	NA	37942708	37945474	Gene ID= novel_gene_chr22_2317 TPM= 15.18 Transcript Type= NA
chr22	37953663	37969312	37953663	37969312	+	ENST00000442738.6@POLR2F	ENST00000442738.6	protein_coding	37953663,37956773,37959346,37967099,37967625	37953807,37956842,37959476,37967170,37969312	Gene ID= ENSG00000100142.14 TPM= 21.02 Transcript Type= protein_coding
chr22	37953699	37967798	37953699	37967798	+	ENST00000483713.5@POLR2F	ENST00000483713.5	protein_coding	37953699,37956773,37959346,37967099,37967625	37953807,37956901,37959476,37967170,37967798	Gene ID= ENSG00000100142.14 TPM= 9.34 Transcript Type= nonsense_mediated_decay
chr22	38057168	38075701	38057168	38075701	+	transcript2325.chr22.nic@PICK1	transcript2325.chr22.nic	protein_coding	38057168,38057753,38059234,38065002,38067704,38069033,38070838,38071682,38072477,38073000,38073773,38074307,38074864	38057436,38057850,38059345,38065130,38067770,38069122,38070891,38071744,38072610,38073092,38073823,38074451,38075701	Gene ID= ENSG00000100151.15 TPM= 11.84 Transcript Type= NA
chr22	38057200	38075701	38057200	38075701	+	ENST00000404072.7@PICK1	ENST00000404072.7	protein_coding	38057200,38057753,38059234,38065002,38067704,38069033,38070838,38071682,38072477,38073000,38073773,38074307,38074864	38057489,38057850,38059345,38065130,38067770,38069122,38070891,38071744,38072610,38073092,38073823,38074451,38075701	Gene ID= ENSG00000100151.15 TPM= 8.34 Transcript Type= protein_coding
chr22	38057286	38075701	38057286	38075701	+	transcript2334.chr22.nic@PICK1	transcript2334.chr22.nic	protein_coding	38057286,38057753,38059234,38065002,38067704,38069033,38070838,38071682,38072477,38073000,38073773,38074864	38057587,38057850,38059345,38065130,38067770,38069122,38070891,38071744,38072610,38073092,38074451,38075701	Gene ID= ENSG00000100151.15 TPM= 2.5 Transcript Type= NA
chr22	38057404	38075701	38057404	38075701	+	transcript2335.chr22.nnic@PICK1	transcript2335.chr22.nnic	protein_coding	38057404,38057753,38059234,38065002,38067704,38069033,38071682,38072477,38073000,38073773,38074307,38074864	38057587,38057850,38059345,38065130,38067770,38069122,38071744,38072610,38073092,38073823,38074451,38075701	Gene ID= ENSG00000100151.15 TPM= 2.5 Transcript Type= NA
chr22	38057472	38075698	38057472	38075698	+	transcript2337.chr22.nic@PICK1	transcript2337.chr22.nic	protein_coding	38057472,38057753,38059234,38065002,38067704,38069033,38070838,38071682,38072477,38073000,38073773	38057587,38057850,38059345,38065130,38067770,38069122,38070891,38071744,38072610,38073092,38075698	Gene ID= ENSG00000100151.15 TPM= 2.5 Transcript Type= NA
chr22	38057402	38075701	38057402	38075701	+	transcript2340.chr22.nic@PICK1	transcript2340.chr22.nic	protein_coding	38057402,38057753,38059234,38065002,38069033,38070838,38071682,38072477,38073000,38073773,38074864	38057587,38057850,38059345,38067770,38069122,38070891,38071744,38072610,38073092,38074451,38075701	Gene ID= ENSG00000100151.15 TPM= 4.67 Transcript Type= NA
chr22	38057255	38075693	38057255	38075693	+	ENST00000484021.5@PICK1	ENST00000484021.5	protein_coding	38057255,38057753,38059234,38065002,38067704,38069033,38070838,38071682,38072477,38073000,38073773,38074864	38057436,38057850,38059345,38065130,38067770,38069122,38070891,38071744,38072610,38073092,38074451,38075693	Gene ID= ENSG00000100151.15 TPM= 3.67 Transcript Type= retained_intron
chr22	38057407	38075701	38057407	38075701	+	ENST00000356976.7@PICK1	ENST00000356976.7	protein_coding	38057407,38057753,38059234,38065002,38067704,38069033,38070838,38071682,38072477,38073000,38073773,38074307,38074864	38057587,38057850,38059345,38065130,38067770,38069122,38070891,38071744,38072610,38073092,38073823,38074451,38075701	Gene ID= ENSG00000100151.15 TPM= 23.52 Transcript Type= protein_coding
chr22	38084889	38110670	38084889	38110670	-	ENST00000381669.7@BAIAP2L2	ENST00000381669.7	protein_coding	38110475,38109133,38108255,38107852,38098411,38098063,38097032,38089522,38089096,38088748,38087124,38086242,38085686,38084889	38110670,38109208,38108341,38107913,38098482,38098179,38097178,38089674,38089231,38088964,38087264,38086449,38085732,38085375	Gene ID= ENSG00000128298.16 TPM= 1.17 Transcript Type= protein_coding
chr22	38111500	38181842	38111500	38181842	-	transcript2352.chr22.nic@PLA2G6	transcript2352.chr22.nic	protein_coding	38181784,38169218,38145438,38143105,38139982,38134988,38132831,38129454,38128269,38126371,38125639,38123095,38120759,38116075,38115527,38113487,38112504,38111500	38181842,38169471,38145653,38143288,38140169,38135084,38133013,38129562,38128430,38127458,38125691,38123258,38120909,38116211,38115681,38113654,38112577,38112305	Gene ID= ENSG00000184381.18 TPM= 7.01 Transcript Type= NA
chr22	38111500	38181829	38111500	38181829	-	ENST00000402064.5@PLA2G6	ENST00000402064.5	protein_coding	38181784,38169218,38145438,38143105,38139982,38134988,38132831,38129454,38126371,38123095,38120759,38116075,38115527,38113487,38112504,38111500	38181829,38169471,38145653,38143288,38140169,38135084,38133013,38129562,38126449,38123258,38120909,38116211,38115681,38113654,38112577,38112305	Gene ID= ENSG00000184381.18 TPM= 7.01 Transcript Type= protein_coding
chr22	38201882	38216511	38201882	38216511	+	ENST00000338483.6@MAFF	ENST00000338483.6	protein_coding	38201882,38213823,38214420	38202212,38213889,38216511	Gene ID= ENSG00000185022.11 TPM= 144.2 Transcript Type= protein_coding
chr22	38213535	38216505	38213535	38216505	+	ENST00000407965.1@MAFF	ENST00000407965.1	protein_coding	38213535,38213823,38214420	38213706,38213889,38216505	Gene ID= ENSG00000185022.11 TPM= 41.45 Transcript Type= protein_coding
chr22	38219324	38272664	38219324	38272664	-	ENST00000361684.8@TMEM184B	ENST00000361684.8	protein_coding	38272499,38247770,38245935,38231244,38230669,38226779,38225424,38224785,38219324	38272664,38248019,38246100,38231334,38230744,38226870,38225593,38224979,38221710	Gene ID= ENSG00000198792.12 TPM= 29.01 Transcript Type= protein_coding
chr22	38219312	38224103	38219312	38224103	-	ENST00000633056.1@TMEM184B	ENST00000633056.1	protein_coding	38219312	38224103	Gene ID= ENSG00000198792.12 TPM= 15.88 Transcript Type= retained_intron
chr22	38219312	38273010	38219312	38273010	-	ENST00000436674.5@TMEM184B	ENST00000436674.5	protein_coding	38272884,38247770,38246785,38245935,38231244,38230669,38226779,38225424,38224785,38219312	38273010,38248019,38246885,38246100,38231334,38230744,38226870,38225593,38224979,38221710	Gene ID= ENSG00000198792.12 TPM= 24.93 Transcript Type= nonsense_mediated_decay
chr22	38219291	38273034	38219291	38273034	-	ENST00000361906.7@TMEM184B	ENST00000361906.7	protein_coding	38272884,38247770,38245935,38231244,38230669,38226779,38225424,38224785,38219291	38273034,38248019,38246100,38231334,38230744,38226870,38225593,38224979,38221710	Gene ID= ENSG00000198792.12 TPM= 160.95 Transcript Type= protein_coding
chr22	38291918	38317432	38291918	38317432	-	transcript2399.chr22.nic@CSNK1E	transcript2399.chr22.nic	protein_coding	38317160,38314082,38303138,38302861,38300724,38299895,38298786,38295387,38294342,38294109,38293255,38291918	38317432,38314169,38303248,38303009,38300952,38300065,38298934,38295447,38294534,38294248,38293319,38291938	Gene ID= ENSG00000213923.11 TPM= 13.54 Transcript Type= NA
chr22	38291918	38317017	38291918	38317017	-	transcript2405.chr22.nic@CSNK1E	transcript2405.chr22.nic	protein_coding	38316665,38314082,38303138,38302861,38300724,38299895,38298786,38294342,38294109,38293255,38291918	38317017,38314169,38303248,38303009,38300952,38300065,38298934,38294534,38294248,38293319,38291938	Gene ID= ENSG00000213923.11 TPM= 3.89 Transcript Type= NA
chr22	38296206	38317439	38296206	38317439	-	ENST00000405675.7@CSNK1E	ENST00000405675.7	protein_coding	38317160,38314082,38303138,38302861,38300724,38299895,38298786,38296206	38317439,38314169,38303248,38303009,38300952,38300065,38298934,38297155	Gene ID= ENSG00000213923.11 TPM= 11.21 Transcript Type= protein_coding
chr22	38290692	38317408	38290692	38317408	-	ENST00000396832.5@CSNK1E	ENST00000396832.5	protein_coding	38317160,38314082,38303138,38302861,38300724,38299895,38298786,38294342,38294109,38293255,38290692	38317408,38314169,38303248,38303009,38300952,38300065,38298934,38294534,38294248,38293319,38291938	Gene ID= ENSG00000213923.11 TPM= 107.34 Transcript Type= protein_coding
chr22	38296205	38317411	38296205	38317411	-	ENST00000413574.6@CSNK1E	ENST00000413574.6	protein_coding	38317160,38314082,38303138,38302861,38300724,38299895,38298786,38296205	38317411,38314169,38303248,38303009,38300952,38300065,38298934,38296686	Gene ID= ENSG00000213923.11 TPM= 3.04 Transcript Type= protein_coding
chr22	38297602	38300025	38297602	38300025	-	ENST00000442216.1@CSNK1E	ENST00000442216.1	protein_coding	38299895,38298786,38298094,38297602	38300025,38298934,38298203,38297998	Gene ID= ENSG00000213923.11 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chr22	38335297	38398931	38335297	38398931	-	transcript2425.chr22.nnic@Z98749.2	transcript2425.chr22.nnic	transcribed_unprocessed_pseudogene	38398780,38380937,38380370,38369986,38361798,38361399,38336125,38335297	38398931,38380990,38380423,38370045,38361855,38361560,38336706,38335809	Gene ID= ENSG00000244627.5 TPM= 2.34 Transcript Type= NA
chr22	38335297	38398931	38335297	38398931	-	transcript2426.chr22.nic@Z98749.2	transcript2426.chr22.nic	transcribed_unprocessed_pseudogene	38398780,38380937,38380370,38361399,38347489,38336125,38335297	38398931,38380990,38380423,38361560,38347585,38336706,38335809	Gene ID= ENSG00000244627.5 TPM= 2.34 Transcript Type= NA
chr22	38335297	38398931	38335297	38398931	-	transcript2428.chr22.nic@Z98749.2	transcript2428.chr22.nic	transcribed_unprocessed_pseudogene	38398780,38380937,38380370,38361399,38336125,38335297	38398931,38380990,38380423,38361560,38336706,38335809	Gene ID= ENSG00000244627.5 TPM= 3.5 Transcript Type= NA
chr22	38335297	38398931	38335297	38398931	-	transcript2431.chr22.nnic@Z98749.2	transcript2431.chr22.nnic	transcribed_unprocessed_pseudogene	38398780,38380937,38380370,38336125,38335297	38398931,38380990,38380423,38336706,38335809	Gene ID= ENSG00000244627.5 TPM= 2.34 Transcript Type= NA
chr22	38468062	38483447	38468062	38483447	+	ENST00000216014.8@KDELR3	ENST00000216014.8	protein_coding	38468062,38474523,38479593,38481212,38482496	38468324,38474623,38479751,38481464,38483447	Gene ID= ENSG00000100196.10 TPM= 23.35 Transcript Type= protein_coding
chr22	38483438	38506340	38483438	38506340	-	transcript2441.chr22.nnic@DDX17	transcript2441.chr22.nnic	protein_coding	38505951,38501130,38499400,38498440,38498085,38495796,38494886,38494630,38494021,38493710,38492056,38487976,38483438	38506340,38501280,38499499,38498575,38498152,38495937,38495048,38494802,38494131,38493771,38492117,38488115,38485387	Gene ID= ENSG00000100201.20 TPM= 32.69 Transcript Type= NA
chr22	38483440	38506337	38483440	38506337	-	ENST00000396821.7@DDX17	ENST00000396821.7	protein_coding	38505951,38501130,38499400,38498440,38498085,38495796,38494886,38494630,38494021,38493710,38492056,38487873,38483440	38506337,38501280,38499499,38498573,38498150,38495937,38495046,38494802,38494131,38493771,38492115,38488115,38486440	Gene ID= ENSG00000100201.20 TPM= 133.11 Transcript Type= protein_coding
chr22	38491924	38506340	38491924	38506340	-	transcript2445.chr22.nnic@DDX17	transcript2445.chr22.nnic	protein_coding	38505951,38501130,38499400,38498440,38498085,38495796,38494886,38494630,38494021,38493710,38491924	38506340,38501280,38499499,38498575,38498152,38495937,38495048,38494802,38494131,38493771,38492117	Gene ID= ENSG00000100201.20 TPM= 8.17 Transcript Type= NA
chr22	38483438	38506340	38483438	38506340	-	transcript2450.chr22.nnic@DDX17	transcript2450.chr22.nnic	protein_coding	38505951,38501130,38499400,38498440,38498102,38483438	38506340,38501280,38499499,38498575,38498152,38485507	Gene ID= ENSG00000100201.20 TPM= 32.69 Transcript Type= NA
chr22	38493678	38495997	38493678	38495997	+	transcript2454.chr22.nnic@NA	transcript2454.chr22.nnic	NA	38493678	38495997	Gene ID= novel_gene_chr22_2455 TPM= 3.5 Transcript Type= NA
chr22	38656638	38673846	38656638	38673846	+	transcript2456.chr22.nnic@CBY1	transcript2456.chr22.nnic	protein_coding	38656638,38656956,38668017,38670884,38671070,38673159	38656750,38657143,38668132,38670989,38671188,38673846	Gene ID= ENSG00000100211.10 TPM= 2.72 Transcript Type= NA
chr22	38656651	38673846	38656651	38673846	+	ENST00000396811.6@CBY1	ENST00000396811.6	protein_coding	38656651,38665546,38668017,38670884,38671070,38673159	38656750,38665685,38668132,38670989,38671188,38673846	Gene ID= ENSG00000100211.10 TPM= 1.55 Transcript Type= protein_coding
chr22	38656655	38673854	38656655	38673854	+	ENST00000216029.7@CBY1	ENST00000216029.7	protein_coding	38656655,38668017,38670884,38671070,38673159	38656750,38668132,38670989,38671188,38673854	Gene ID= ENSG00000100211.10 TPM= 17.9 Transcript Type= protein_coding
chr22	38681948	38685421	38681948	38685421	+	ENST00000216034.5@TOMM22	ENST00000216034.5	protein_coding	38681948,38682323,38682879,38683767	38682095,38682441,38682996,38685421	Gene ID= ENSG00000100216.5 TPM= 51.37 Transcript Type= protein_coding
chr22	38685543	38700667	38685543	38700667	-	ENST00000216039.9@JOSD1	ENST00000216039.9	protein_coding	38699803,38689296,38688935,38685543	38700667,38689424,38689129,38688001	Gene ID= ENSG00000100221.10 TPM= 7.01 Transcript Type= protein_coding
chr22	38705723	38733587	38705723	38733587	+	ENST00000216044.9@GTPBP1	ENST00000216044.9	protein_coding	38705723,38708845,38715907,38716652,38721742,38724297,38726006,38726258,38727213,38727983,38729462,38730612	38706147,38708956,38716087,38717000,38721865,38724411,38726150,38726440,38727348,38728161,38729662,38733587	Gene ID= ENSG00000100226.15 TPM= 31.53 Transcript Type= protein_coding
chr22	38727115	38733587	38727115	38733587	+	transcript2519.chr22.nic@GTPBP1	transcript2519.chr22.nic	protein_coding	38727115,38727983,38730612	38727348,38729662,38733587	Gene ID= ENSG00000100226.15 TPM= 11.68 Transcript Type= NA
chr22	38734725	38755528	38734725	38755528	-	ENST00000405510.5@SUN2	ENST00000405510.5	protein_coding	38755272,38754642,38752507,38751210,38750898,38750225,38749766,38748713,38745684,38742301,38741494,38741007,38740267,38739722,38739342,38738873,38738587,38738173,38734725	38755528,38754706,38752665,38751373,38751035,38750320,38749859,38748783,38745811,38742555,38741571,38741050,38740432,38739943,38739426,38738988,38738754,38738265,38736380	Gene ID= ENSG00000100242.15 TPM= 106.79 Transcript Type= protein_coding
chr22	38734736	38756044	38734736	38756044	-	transcript2471.chr22.nic@SUN2	transcript2471.chr22.nic	protein_coding	38755763,38754642,38752507,38751210,38750898,38750225,38749766,38748713,38745684,38742301,38741494,38741007,38740267,38739722,38739342,38738873,38738587,38738173,38734736	38756044,38754706,38752665,38751373,38751035,38750320,38749859,38748783,38745811,38742555,38741571,38741050,38740432,38739943,38739426,38738988,38738754,38738265,38736380	Gene ID= ENSG00000100242.15 TPM= 253.26 Transcript Type= NA
chr22	38734736	38756035	38734736	38756035	-	transcript2478.chr22.nic@SUN2	transcript2478.chr22.nic	protein_coding	38755763,38752507,38751210,38750898,38750225,38749766,38748713,38745684,38742301,38741494,38741007,38740267,38739722,38739342,38738873,38738587,38738173,38734736	38756035,38752665,38751373,38751035,38750320,38749859,38748783,38745811,38742555,38741571,38741050,38740432,38739943,38739426,38738988,38738754,38738265,38736380	Gene ID= ENSG00000100242.15 TPM= 384.43 Transcript Type= NA
chr22	38778508	38794173	38778508	38794173	-	ENST00000216068.8@DNAL4	ENST00000216068.8	protein_coding	38794068,38782663,38780926,38778508	38794173,38782870,38781009,38779613	Gene ID= ENSG00000100246.12 TPM= 37.36 Transcript Type= protein_coding
chr22	38792289	38794169	38792289	38794169	-	transcript2526.chr22.nnic@NA	transcript2526.chr22.nnic	NA	38792289	38794169	Gene ID= novel_gene_chr22_2527 TPM= 3.5 Transcript Type= NA
chr22	38861450	38872314	38861450	38872314	-	ENST00000407418.7@CBX6	ENST00000407418.7	protein_coding	38872122,38871902,38871692,38871480,38861450	38872314,38871945,38871757,38871546,38867201	Gene ID= ENSG00000183741.11 TPM= 71.22 Transcript Type= protein_coding
chr22	38864229	38872216	38864229	38872216	-	ENST00000216083.6@CBX6	ENST00000216083.6	protein_coding	38872122,38871902,38871692,38871480,38864229	38872216,38871945,38871757,38871546,38867147	Gene ID= ENSG00000183741.11 TPM= 135.44 Transcript Type= protein_coding
chr22	38982409	38992784	38982409	38992784	+	ENST00000333467.3@APOBEC3B	ENST00000333467.3	protein_coding	38982409,38984075,38985812,38986298,38989457,38991332,38992034,38992431	38982470,38984231,38986091,38986412,38989610,38991626,38992149,38992784	Gene ID= ENSG00000179750.15 TPM= 1.75 Transcript Type= protein_coding
chr22	38982399	38992804	38982399	38992804	+	ENST00000402182.7@APOBEC3B	ENST00000402182.7	protein_coding	38982399,38984075,38985812,38986298,38989457,38991332,38992034	38982470,38984231,38986091,38986412,38989610,38991626,38992804	Gene ID= ENSG00000179750.15 TPM= 1.75 Transcript Type= protein_coding
chr22	39014083	39020352	39014083	39020352	+	ENST00000361441.4@APOBEC3C	ENST00000361441.4	protein_coding	39014083,39015595,39017766,39018269	39014379,39015751,39018045,39020352	Gene ID= ENSG00000244509.3 TPM= 56.04 Transcript Type= protein_coding
chr22	39021107	39033261	39021107	39033261	+	transcript2549.chr22.nnic@APOBEC3D	transcript2549.chr22.nnic	protein_coding	39021107,39022822,39025070,39025557,39029358,39031694,39032198	39021536,39023014,39025349,39025666,39029519,39031973,39033261	Gene ID= ENSG00000243811.8 TPM= 11.68 Transcript Type= NA
chr22	39040604	39053910	39040604	39053910	+	ENST00000308521.9@APOBEC3F	ENST00000308521.9	protein_coding	39040604,39042937,39044941,39045428,39049425,39052074,39052577	39040977,39043090,39045220,39045542,39049581,39052353,39053910	Gene ID= ENSG00000128394.16 TPM= 1.17 Transcript Type= protein_coding
chr22	39077054	39087743	39077054	39087743	+	transcript2551.chr22.nic@APOBEC3G	transcript2551.chr22.nic	protein_coding	39077054,39080933,39081471,39083731,39086279,39087011,39087407	39077378,39081227,39081585,39083884,39086567,39087126,39087743	Gene ID= ENSG00000239713.8 TPM= 3.5 Transcript Type= NA
chr22	39077005	39087743	39077005	39087743	+	ENST00000407997.3@APOBEC3G	ENST00000407997.3	protein_coding	39077005,39078932,39080933,39081471,39083731,39086279,39087011,39087407	39077378,39079085,39081227,39081585,39083884,39086567,39087126,39087743	Gene ID= ENSG00000239713.8 TPM= 29.19 Transcript Type= protein_coding
chr22	39097224	39104067	39097224	39104067	+	ENST00000348946.8@APOBEC3H	ENST00000348946.8	protein_coding	39097224,39100272,39101237,39101918,39103692	39097343,39100428,39101504,39102042,39104067	Gene ID= ENSG00000100298.15 TPM= 1.17 Transcript Type= protein_coding
chr22	39130772	39152638	39130772	39152638	-	transcript2565.chr22.nnic@CBX7	transcript2565.chr22.nnic	protein_coding	39152376,39149789,39141371,39138636,39134401,39130772	39152638,39149832,39141436,39138702,39134575,39134048	Gene ID= ENSG00000100307.12 TPM= 2.34 Transcript Type= NA
chr22	39130772	39152557	39130772	39152557	-	transcript2566.chr22.nnic@CBX7	transcript2566.chr22.nnic	protein_coding	39152376,39149789,39141347,39138636,39134401,39130772	39152557,39149832,39141436,39138702,39134752,39134048	Gene ID= ENSG00000100307.12 TPM= 4.67 Transcript Type= NA
chr22	39130772	39152671	39130772	39152671	-	transcript2571.chr22.nnic@CBX7	transcript2571.chr22.nnic	protein_coding	39152376,39149789,39141371,39134401,39130772	39152671,39149832,39141436,39134473,39134048	Gene ID= ENSG00000100307.12 TPM= 2.34 Transcript Type= NA
chr22	39130772	39152490	39130772	39152490	-	transcript2573.chr22.nnic@CBX7	transcript2573.chr22.nnic	protein_coding	39152376,39149789,39141371,39134401,39130772	39152490,39149832,39141436,39134752,39134048	Gene ID= ENSG00000100307.12 TPM= 2.34 Transcript Type= NA
chr22	39130772	39152650	39130772	39152650	-	ENST00000216133.9@CBX7	ENST00000216133.9	protein_coding	39152376,39149789,39141371,39138636,39134401,39130772	39152650,39149832,39141436,39138702,39134752,39134048	Gene ID= ENSG00000100307.12 TPM= 117.93 Transcript Type= protein_coding
chr22	39147118	39152674	39147118	39152674	-	ENST00000482294.1@CBX7	ENST00000482294.1	protein_coding	39152376,39147118	39152674,39149832	Gene ID= ENSG00000100307.12 TPM= 7.01 Transcript Type= retained_intron
chr22	39139310	39141757	39139310	39141757	+	transcript2577.chr22.nnic@NA	transcript2577.chr22.nnic	NA	39139310	39141757	Gene ID= novel_gene_chr22_2578 TPM= 10.51 Transcript Type= NA
chr22	39223684	39244982	39223684	39244982	-	transcript2583.chr22.nic@PDGFB	transcript2583.chr22.nic	protein_coding	39243901,39235778,39233435,39231622,39230084,39223684	39244982,39235874,39233524,39231827,39230228,39225847	Gene ID= ENSG00000100311.16 TPM= 11.68 Transcript Type= NA
chr22	39312884	39319771	39312884	39319771	-	ENST00000216146.8@RPL3	ENST00000216146.8	protein_coding	39319595,39318400,39317461,39316706,39315369,39314686,39314107,39313634,39313191,39312884	39319771,39318592,39317629,39316841,39315555,39314846,39314208,39313729,39313310,39312984	Gene ID= ENSG00000100316.15 TPM= 4083.89 Transcript Type= protein_coding
chr22	39312882	39318614	39312882	39318614	-	ENST00000401609.5@RPL3	ENST00000401609.5	protein_coding	39318400,39317461,39316706,39315369,39314686,39314107,39313634,39313191,39312882	39318614,39317629,39316841,39315555,39314846,39314208,39313729,39313310,39312984	Gene ID= ENSG00000100316.15 TPM= 60.81 Transcript Type= protein_coding
chr22	39349925	39378389	39349925	39378389	+	ENST00000318801.8@SYNGR1	ENST00000318801.8	protein_coding	39349925,39374316,39376052,39377598	39350109,39374553,39376197,39378389	Gene ID= ENSG00000100321.14 TPM= 24.52 Transcript Type= protein_coding
chr22	39349921	39385575	39349921	39385575	+	transcript2631.chr22.nnic@SYNGR1	transcript2631.chr22.nnic	protein_coding	39349921,39374316,39376052,39381762	39350109,39374553,39376197,39385575	Gene ID= ENSG00000100321.14 TPM= 5.84 Transcript Type= NA
chr22	39349996	39385588	39349996	39385588	+	ENST00000328933.9@SYNGR1	ENST00000328933.9	protein_coding	39349996,39374316,39376052,39381696	39350109,39374553,39376197,39385588	Gene ID= ENSG00000100321.14 TPM= 5.84 Transcript Type= protein_coding
chr22	39399741	39431882	39399741	39431882	+	ENST00000216160.10@TAB1	ENST00000216160.10	protein_coding	39399741,39415006,39415500,39416791,39417711,39418732,39419519,39421827,39426703,39428021,39430015	39399835,39415142,39415653,39416877,39417849,39418845,39419630,39421971,39426925,39428183,39431882	Gene ID= ENSG00000100324.13 TPM= 29.19 Transcript Type= protein_coding
chr22	39457344	39492194	39457344	39492194	+	ENST00000341184.6@MGAT3	ENST00000341184.6	protein_coding	39457344,39487347	39457557,39492194	Gene ID= ENSG00000128268.11 TPM= 46.7 Transcript Type= protein_coding
chr22	39472707	39492194	39472707	39492194	+	transcript2642.chr22.nnic@MGAT3	transcript2642.chr22.nnic	protein_coding	39472707,39487347	39472876,39492194	Gene ID= ENSG00000128268.11 TPM= 45.54 Transcript Type= NA
chr22	39475425	39477543	39475425	39477543	+	transcript2645.chr22.nnic@NA	transcript2645.chr22.nnic	NA	39475425	39477543	Gene ID= novel_gene_chr22_2646 TPM= 2.34 Transcript Type= NA
chr22	39502302	39516380	39502302	39516380	+	ENST00000433117.6@MIEF1	ENST00000433117.6	protein_coding	39502302,39504203,39511288,39511849,39512318,39513517	39502437,39504534,39511438,39512026,39512494,39516380	Gene ID= ENSG00000100335.13 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chr22	39502353	39518132	39502353	39518132	+	ENST00000325301.6@MIEF1	ENST00000325301.6	protein_coding	39502353,39504203,39511288,39511849,39512232,39513517	39502437,39504534,39511438,39512026,39512494,39518132	Gene ID= ENSG00000100335.13 TPM= 14.01 Transcript Type= protein_coding
chr22	39519695	39522683	39519695	39522683	+	ENST00000404241.6@ATF4	ENST00000404241.6	protein_coding	39519695,39520178,39521354,39521773	39519801,39520751,39521671,39522683	Gene ID= ENSG00000128272.14 TPM= 145.17 Transcript Type= protein_coding
chr22	39520564	39522683	39520564	39522683	+	ENST00000337304.2@ATF4	ENST00000337304.2	protein_coding	39520564,39521773	39521671,39522683	Gene ID= ENSG00000128272.14 TPM= 42.42 Transcript Type= protein_coding
chr22	39520564	39522685	39520564	39522685	+	ENST00000396680.2@ATF4	ENST00000396680.2	protein_coding	39520564,39521354,39521773	39520751,39521671,39522685	Gene ID= ENSG00000128272.14 TPM= 50.59 Transcript Type= protein_coding
chr22	39529093	39532855	39529093	39532855	-	ENST00000334678.7@RPS19BP1	ENST00000334678.7	protein_coding	39532687,39532395,39529820,39529093	39532855,39532523,39529917,39529623	Gene ID= ENSG00000187051.8 TPM= 92.24 Transcript Type= protein_coding
chr22	39901082	39973721	39901082	39973721	+	ENST00000344138.8@GRAP2	ENST00000344138.8	protein_coding	39901082,39947093,39955819,39960055,39965990,39968042,39969411,39970905	39901330,39947184,39955910,39960174,39966158,39968272,39969533,39973721	Gene ID= ENSG00000100351.16 TPM= 3.5 Transcript Type= protein_coding
chr22	40044776	40323800	40044776	40323800	+	transcript2670.chr22.nic@TNRC6B	transcript2670.chr22.nic	protein_coding	40044776,40117055,40125772,40156115,40246015,40251179,40261832,40264688,40273425,40277077,40277999,40279995,40285645,40300455,40300910,40301150,40308512,40310817,40312505,40312902,40315283,40315942,40321090,40322854	40044998,40117128,40125862,40156182,40246102,40251200,40262173,40267036,40273600,40277151,40278044,40280143,40285770,40300586,40301005,40301333,40308649,40310993,40312651,40312997,40315507,40316012,40321229,40323800	Gene ID= ENSG00000100354.20 TPM= 12.84 Transcript Type= NA
chr22	40346503	40366996	40346503	40366996	+	ENST00000342312.9@ADSL	ENST00000342312.9	protein_coding	40346503,40349832,40353073,40354248,40358864,40359260,40360402,40361273,40361488,40362981,40364276,40366436	40346711,40350035,40353117,40354327,40359035,40359306,40360492,40361342,40361635,40363071,40364365,40366996	Gene ID= ENSG00000239900.12 TPM= 1.17 Transcript Type= protein_coding
chr22	40370573	40410103	40370573	40410103	+	transcript2688.chr22.nic@SGSM3	transcript2688.chr22.nic	protein_coding	40370573,40400696,40401593,40402139,40404247,40404557,40405141,40405649,40406078,40406438,40407017,40407201,40407413,40407789,40408071,40408277,40408627,40408794,40408933,40409250,40409465	40370688,40400813,40401675,40402205,40404455,40404664,40405284,40405844,40406223,40406662,40407071,40407328,40407568,40407843,40408120,40408429,40408697,40408842,40409018,40409372,40410103	Gene ID= ENSG00000100359.20 TPM= 11.76 Transcript Type= NA
chr22	40370573	40410108	40370573	40410108	+	transcript2690.chr22.nic@SGSM3	transcript2690.chr22.nic	protein_coding	40370573,40400696,40401593,40402139,40404247,40404557,40405141,40405649,40406078,40406438,40407017,40407201,40407413,40407789,40408071,40408277,40408627,40408794,40408933,40409465,40409682	40370688,40400813,40401675,40402205,40404455,40404664,40405284,40405844,40406223,40406662,40407071,40407328,40407568,40407843,40408120,40408429,40408697,40408842,40409372,40409525,40410108	Gene ID= ENSG00000100359.20 TPM= 16.61 Transcript Type= NA
chr22	40370573	40410108	40370573	40410108	+	transcript2703.chr22.nic@SGSM3	transcript2703.chr22.nic	protein_coding	40370573,40400696,40402139,40404247,40404557,40405141,40405649,40406078,40406438,40407017,40407201,40407413,40407789,40408071,40408277,40408627,40408794,40408933,40409250,40409465,40409682	40370688,40400813,40402205,40404455,40404664,40405284,40405844,40406223,40406662,40407071,40407328,40407568,40407843,40408120,40408429,40408697,40408842,40409018,40409372,40409525,40410108	Gene ID= ENSG00000100359.20 TPM= 32.69 Transcript Type= NA
chr22	40370611	40410289	40370611	40410289	+	ENST00000248929.13@SGSM3	ENST00000248929.13	protein_coding	40370611,40400696,40401593,40402139,40404247,40404557,40405141,40405649,40406078,40406438,40407017,40407201,40407413,40407789,40408071,40408277,40408627,40408794,40408933,40409250,40409465,40409682	40370688,40400813,40401675,40402205,40404455,40404664,40405284,40405844,40406223,40406662,40407071,40407328,40407568,40407843,40408120,40408429,40408697,40408842,40409018,40409372,40409525,40410289	Gene ID= ENSG00000100359.20 TPM= 10.59 Transcript Type= protein_coding
chr22	40370639	40410108	40370639	40410108	+	ENST00000485962.5@SGSM3	ENST00000485962.5	protein_coding	40370639,40400696,40401593,40402139,40404247,40404557,40405141,40405649,40406078,40406438,40407017,40407789,40408071,40408277,40408627,40408794,40408933,40409250,40409465,40409682	40370688,40400813,40401675,40402205,40404455,40404664,40405284,40405844,40406223,40406662,40407568,40407843,40408120,40408429,40408697,40408842,40409018,40409372,40409525,40410108	Gene ID= ENSG00000100359.20 TPM= 3.58 Transcript Type= retained_intron
chr22	40550839	40636719	40550839	40636719	-	transcript2774.chr22.nic@MKL1	transcript2774.chr22.nic	protein_coding	40636478,40550839	40636719,40552367	Gene ID= ENSG00000196588.14 TPM= 2.34 Transcript Type= NA
chr22	40410281	40636685	40410281	40636685	-	ENST00000355630.7@MKL1	ENST00000355630.7	protein_coding	40636478,40594674,40552106,40463221,40435499,40431405,40429606,40424206,40423536,40420847,40420405,40418374,40417341,40416986,40410281	40636685,40594735,40552367,40463286,40435554,40431480,40429767,40424381,40423685,40421100,40420576,40419384,40417493,40417046,40411907	Gene ID= ENSG00000196588.14 TPM= 28.02 Transcript Type= protein_coding
chr22	40769630	40819382	40769630	40819382	-	ENST00000435456.6@SLC25A17	ENST00000435456.6	protein_coding	40819195,40799023,40794514,40792525,40779009,40777228,40777040,40773937,40769630	40819382,40799083,40794580,40792676,40779125,40777373,40777135,40774019,40770981	Gene ID= ENSG00000100372.14 TPM= 4.67 Transcript Type= protein_coding
chr22	40769630	40819399	40769630	40819399	-	ENST00000544408.5@SLC25A17	ENST00000544408.5	protein_coding	40819195,40799023,40779009,40777228,40777040,40773937,40769630	40819399,40799083,40779125,40777373,40777135,40774019,40770981	Gene ID= ENSG00000100372.14 TPM= 2.34 Transcript Type= protein_coding
chr22	40822872	40825320	40822872	40825320	-	transcript2803.chr22.nnic@NA	transcript2803.chr22.nnic	NA	40822872	40825320	Gene ID= novel_gene_chr22_2804 TPM= 2.34 Transcript Type= NA
chr22	40824535	40857022	40824535	40857022	-	ENST00000216218.7@ST13	ENST00000216218.7	protein_coding	40856431,40850823,40848294,40844839,40840626,40835803,40835560,40832569,40830840,40829626,40827096,40824535	40857022,40850880,40848369,40844909,40840692,40835887,40835670,40832671,40830956,40829674,40827229,40826666	Gene ID= ENSG00000100380.13 TPM= 46.7 Transcript Type= protein_coding
chr22	40857097	40862770	40857097	40862770	+	ENST00000482652.1@XPNPEP3	ENST00000482652.1	protein_coding	40857097,40860678,40861618	40857245,40860793,40862770	Gene ID= ENSG00000196236.12 TPM= 2.34 Transcript Type= processed_transcript
chr22	40857098	40932815	40857098	40932815	+	ENST00000357137.8@XPNPEP3	ENST00000357137.8	protein_coding	40857098,40868999,40881770,40886313,40907587,40909122,40914239,40922333,40924362,40926269	40857245,40869115,40882177,40886515,40907649,40909235,40914324,40922513,40924482,40932815	Gene ID= ENSG00000196236.12 TPM= 14.01 Transcript Type= protein_coding
chr22	40857079	40858025	40857079	40858025	+	transcript2813.chr22.nnic@NA	transcript2813.chr22.nnic	NA	40857079	40858025	Gene ID= novel_gene_chr22_2814 TPM= 2.34 Transcript Type= NA
chr22	40951355	40972662	40951355	40972662	+	transcript2815.chr22.nnic@RBX1	transcript2815.chr22.nnic	protein_coding	40951355,40953555,40955287,40964047,40967799,40972476	40951476,40953633,40955446,40964117,40967884,40972662	Gene ID= ENSG00000100387.8 TPM= 3.5 Transcript Type= NA
chr22	40951359	40973309	40951359	40973309	+	ENST00000216225.8@RBX1	ENST00000216225.8	protein_coding	40951359,40953555,40964047,40967799,40972476	40951476,40953633,40964117,40967884,40973309	Gene ID= ENSG00000100387.8 TPM= 117.93 Transcript Type= protein_coding
chr22	40951355	40972661	40951355	40972661	+	transcript2820.chr22.nnic@RBX1	transcript2820.chr22.nnic	protein_coding	40951355,40953555,40964047,40972476	40951476,40953633,40964117,40972661	Gene ID= ENSG00000100387.8 TPM= 4.67 Transcript Type= NA
chr22	41154377	41178350	41154377	41178350	+	transcript2830.chr22.nnic@EP300	transcript2830.chr22.nnic	protein_coding	41154377,41157169,41158410,41160640,41162726,41164053,41166595,41168449,41168721,41169501,41170406,41172497,41173623,41176247,41176773	41155113,41157408,41158500,41160730,41162779,41164130,41166666,41168603,41168867,41169616,41170571,41172663,41173784,41176528,41178350	Gene ID= ENSG00000100393.12 TPM= 3.5 Transcript Type= NA
chr22	41091786	41180079	41091786	41180079	+	ENST00000263253.8@EP300	ENST00000263253.8	protein_coding	41091786,41117187,41125864,41127487,41129890,41131388,41135813,41137653,41140140,41141048,41146739,41147837,41149038,41149761,41151833,41152206,41154995,41157169,41158412,41160642,41162723,41164053,41166599,41168449,41168721,41169503,41170406,41172499,41173623,41176247,41176773	41093098,41117821,41126040,41127748,41130003,41131633,41135906,41137790,41140257,41141222,41146816,41147946,41149175,41150198,41152012,41152350,41155113,41157408,41158500,41160722,41162779,41164130,41166666,41168599,41168867,41169616,41170571,41172663,41173784,41176528,41180079	Gene ID= ENSG00000100393.12 TPM= 45.54 Transcript Type= protein_coding
chr22	41185219	41197507	41185219	41197507	-	transcript2849.chr22.nnic@EP300-AS1	transcript2849.chr22.nnic	antisense_RNA	41197274,41195482,41185219	41197507,41195521,41186323	Gene ID= ENSG00000231993.1 TPM= 3.5 Transcript Type= NA
chr22	41205288	41231271	41205288	41231271	+	transcript2835.chr22.nnic@L3MBTL2	transcript2835.chr22.nnic	protein_coding	41205288,41209696,41212422,41213893,41216139,41217123,41219419,41220734,41221199,41224020,41224725,41224967,41225794,41226662,41227089,41227804,41229540,41230139	41205386,41209933,41212590,41214026,41216262,41217202,41219536,41220868,41221287,41224251,41224801,41225071,41225941,41226744,41227323,41227869,41229656,41231271	Gene ID= ENSG00000100395.14 TPM= 4.76 Transcript Type= NA
chr22	41205205	41231271	41205205	41231271	+	ENST00000216237.9@L3MBTL2	ENST00000216237.9	protein_coding	41205205,41209696,41213893,41216139,41217123,41219419,41220734,41221199,41224020,41224725,41224967,41225794,41226662,41227089,41227804,41229540,41230139	41205386,41209933,41214026,41216262,41217202,41219536,41220868,41221287,41224251,41224801,41225071,41225941,41226744,41227323,41227869,41229656,41231271	Gene ID= ENSG00000100395.14 TPM= 50.3 Transcript Type= protein_coding
chr22	41205288	41231271	41205288	41231271	+	transcript2839.chr22.nnic@L3MBTL2	transcript2839.chr22.nnic	protein_coding	41205288,41209696,41213893,41216139,41217123,41219419,41220734,41221199,41224020,41224725,41224967,41225794,41226662,41227089,41227804,41230139	41205386,41209933,41214026,41216262,41217202,41219536,41220868,41221287,41224251,41224801,41225071,41225941,41226744,41227323,41227869,41231271	Gene ID= ENSG00000100395.14 TPM= 3.79 Transcript Type= NA
chr22	41205288	41231271	41205288	41231271	+	transcript2840.chr22.nic@L3MBTL2	transcript2840.chr22.nic	protein_coding	41205288,41209696,41216139,41217123,41219419,41220734,41221199,41224020,41224725,41224967,41225794,41226662,41227089,41227804,41229540,41230139	41205386,41209933,41216262,41217202,41219536,41220868,41221287,41224251,41224801,41225071,41225941,41226744,41227323,41227869,41229656,41231271	Gene ID= ENSG00000100395.14 TPM= 7.68 Transcript Type= NA
chr22	41229513	41240934	41229513	41240934	-	ENST00000216241.13@CHADL	ENST00000216241.13	protein_coding	41240874,41239443,41237176,41236484,41235145,41229513	41240934,41239620,41238885,41236650,41235343,41229730	Gene ID= ENSG00000100399.15 TPM= 14.01 Transcript Type= protein_coding
chr22	41245611	41286251	41245611	41286251	-	ENST00000356244.7@RANGAP1	ENST00000356244.7	protein_coding	41285986,41280933,41274600,41268097,41264664,41261446,41257948,41256711,41256191,41256021,41254308,41252872,41251007,41249729,41249330,41245611	41286251,41281082,41274727,41268156,41264843,41261580,41258106,41256824,41256290,41256105,41254494,41252991,41251109,41249817,41249451,41246672	Gene ID= ENSG00000100401.19 TPM= 86.58 Transcript Type= protein_coding
chr22	41245611	41286221	41245611	41286221	-	transcript2861.chr22.nnic@RANGAP1	transcript2861.chr22.nnic	protein_coding	41285544,41280933,41274600,41268097,41264664,41261446,41257948,41256711,41256191,41256021,41254308,41252872,41251007,41249729,41249330,41245611	41286221,41281082,41274727,41268156,41264843,41261580,41258106,41256824,41256290,41256105,41254494,41252991,41251109,41249817,41249451,41246672	Gene ID= ENSG00000100401.19 TPM= 23.53 Transcript Type= NA
chr22	41245611	41286197	41245611	41286197	-	transcript2863.chr22.nnic@RANGAP1	transcript2863.chr22.nnic	protein_coding	41286086,41280933,41274600,41268097,41264664,41261446,41257948,41256711,41256191,41256021,41254308,41252872,41251007,41249729,41249330,41245611	41286197,41281082,41274727,41268156,41264843,41261580,41258106,41256824,41256290,41256105,41254494,41252991,41251109,41249817,41249451,41246672	Gene ID= ENSG00000100401.19 TPM= 9.52 Transcript Type= NA
chr22	41245611	41302341	41245611	41302341	-	transcript2864.chr22.nnic@RANGAP1	transcript2864.chr22.nnic	protein_coding	41302033,41280933,41274600,41268097,41264664,41261446,41257948,41256711,41256191,41256021,41254308,41252872,41251007,41249729,41249330,41245611	41302341,41281082,41274727,41268156,41264843,41261580,41258106,41256824,41256290,41256105,41254494,41252991,41251109,41249817,41249451,41246672	Gene ID= ENSG00000100401.19 TPM= 9.52 Transcript Type= NA
chr22	41245611	41286247	41245611	41286247	-	transcript2866.chr22.nic@RANGAP1	transcript2866.chr22.nic	protein_coding	41285986,41280933,41274600,41268097,41264664,41257948,41256711,41256191,41256021,41254308,41252872,41251007,41249729,41249330,41245611	41286247,41281082,41274727,41268156,41264843,41258106,41256824,41256290,41256105,41254494,41252991,41251109,41249817,41249451,41246672	Gene ID= ENSG00000100401.19 TPM= 8.64 Transcript Type= NA
chr22	41301522	41360147	41301522	41360147	+	ENST00000352645.4@ZC3H7B	ENST00000352645.4	protein_coding	41301522,41320655,41325564,41325721,41327206,41330023,41332171,41338313,41339001,41339816,41341088,41342529,41343415,41346003,41348067,41349120,41351561,41355469,41355757,41355954,41356343,41356645,41357177	41301772,41320713,41325597,41325918,41327364,41330103,41332227,41338355,41339191,41340137,41341146,41342628,41343576,41346208,41348167,41349301,41351646,41355602,41355862,41356062,41356476,41356808,41360147	Gene ID= ENSG00000100403.11 TPM= 39.7 Transcript Type= protein_coding
chr22	41367333	41399324	41367333	41399324	+	ENST00000406644.7@TEF	ENST00000406644.7	protein_coding	41367333,41387351,41394096,41395745	41367599,41387668,41394316,41399324	Gene ID= ENSG00000167074.14 TPM= 93.41 Transcript Type= protein_coding
chr22	41381929	41399326	41381929	41399326	+	ENST00000266304.8@TEF	ENST00000266304.8	protein_coding	41381929,41387351,41394096,41395745	41382201,41387668,41394316,41399326	Gene ID= ENSG00000167074.14 TPM= 98.08 Transcript Type= protein_coding
chr22	41370414	41373365	41370414	41373365	-	transcript2877.chr22.nnic@NA	transcript2877.chr22.nnic	NA	41370414	41373365	Gene ID= novel_gene_chr22_2878 TPM= 7.01 Transcript Type= NA
chr22	41433492	41447023	41433492	41447023	-	ENST00000327492.3@TOB2	ENST00000327492.3	protein_coding	41446379,41433492	41447023,41437407	Gene ID= ENSG00000183864.4 TPM= 141.28 Transcript Type= protein_coding
chr22	41459723	41468700	41459723	41468700	-	transcript2887.chr22.nnic@PHF5A	transcript2887.chr22.nnic	protein_coding	41468602,41468124,41467448,41460039,41459723	41468700,41468147,41467614,41460487,41459897	Gene ID= ENSG00000100410.7 TPM= 5.84 Transcript Type= NA
chr22	41459717	41468725	41459717	41468725	-	ENST00000216252.3@PHF5A	ENST00000216252.3	protein_coding	41468602,41468124,41467448,41459717	41468725,41468147,41467614,41460487	Gene ID= ENSG00000100410.7 TPM= 9.34 Transcript Type= protein_coding
chr22	41469125	41528989	41469125	41528989	+	ENST00000216254.8@ACO2	ENST00000216254.8	protein_coding	41469125,41499726,41507791,41511876,41515377,41515767,41517527,41518481,41520171,41522830,41523205,41523830,41524846,41525193,41526262,41527288,41527901,41528479	41469182,41499862,41508049,41511968,41515535,41515917,41517631,41518572,41520276,41522987,41523278,41523941,41524968,41525348,41526453,41527420,41528022,41528989	Gene ID= ENSG00000100412.15 TPM= 89.9 Transcript Type= protein_coding
chr22	41522372	41524980	41522372	41524980	-	transcript2907.chr22.nnic@NA	transcript2907.chr22.nnic	NA	41522372	41524980	Gene ID= novel_gene_chr22_2908 TPM= 2.34 Transcript Type= NA
chr22	41525826	41544445	41525826	41544445	-	ENST00000355209.8@POLR3H	ENST00000355209.8	protein_coding	41543991,41540699,41532659,41532094,41530687,41525826	41544445,41540795,41532745,41532157,41530888,41529336	Gene ID= ENSG00000100413.16 TPM= 35.61 Transcript Type= protein_coding
chr22	41525804	41544489	41525804	41544489	-	ENST00000396504.6@POLR3H	ENST00000396504.6	protein_coding	41544428,41543991,41540699,41532659,41532094,41530687,41525804	41544489,41544121,41540795,41532745,41532157,41530888,41529336	Gene ID= ENSG00000100413.16 TPM= 20.43 Transcript Type= protein_coding
chr22	41528843	41544455	41528843	41544455	-	ENST00000431534.5@POLR3H	ENST00000431534.5	protein_coding	41543991,41540699,41532604,41532094,41530687,41528843	41544455,41540795,41532745,41532157,41530888,41529336	Gene ID= ENSG00000100413.16 TPM= 5.84 Transcript Type= nonsense_mediated_decay
chr22	41560763	41576666	41560763	41576666	+	ENST00000306149.11@CSDC2	ENST00000306149.11	protein_coding	41560763,41571843,41573655,41574733	41561183,41572141,41573777,41576666	Gene ID= ENSG00000172346.14 TPM= 33.86 Transcript Type= protein_coding
chr22	41576894	41589890	41576894	41589890	-	ENST00000216259.7@PMM1	ENST00000216259.7	protein_coding	41589719,41586076,41584527,41584281,41583959,41578806,41577808,41576894	41589890,41586193,41584603,41584372,41584058,41578881,41577923,41577440	Gene ID= ENSG00000100417.11 TPM= 52.54 Transcript Type= protein_coding
chr22	41576903	41589861	41576903	41589861	-	transcript2917.chr22.nic@PMM1	transcript2917.chr22.nic	protein_coding	41589719,41586076,41583959,41578806,41577808,41576903	41589861,41586193,41584603,41578881,41577923,41577440	Gene ID= ENSG00000100417.11 TPM= 7.01 Transcript Type= NA
chr22	41576937	41589818	41576937	41589818	-	ENST00000485648.5@PMM1	ENST00000485648.5	protein_coding	41589719,41586076,41584527,41583959,41578806,41577808,41576937	41589818,41586193,41584603,41584372,41578881,41577923,41577440	Gene ID= ENSG00000100417.11 TPM= 4.67 Transcript Type= retained_intron
chr22	41598028	41621096	41598028	41621096	-	ENST00000263256.6@DESI1	ENST00000263256.6	protein_coding	41620752,41607840,41607262,41604044,41603259,41598028	41621096,41607861,41607331,41604153,41603381,41601190	Gene ID= ENSG00000100418.7 TPM= 15.18 Transcript Type= protein_coding
chr22	41621119	41664039	41621119	41664039	+	ENST00000360079.7@XRCC6	ENST00000360079.7	protein_coding	41621119,41621990,41628118,41636113,41636516,41637608,41646896,41650723,41653529,41656903,41658252,41661331,41663622	41621345,41622086,41628230,41636251,41636770,41637791,41647082,41650891,41653690,41657032,41658352,41661444,41664039	Gene ID= ENSG00000196419.12 TPM= 446.6 Transcript Type= protein_coding
chr22	41621163	41664048	41621163	41664048	+	ENST00000428575.6@XRCC6	ENST00000428575.6	protein_coding	41621163,41621990,41636113,41636516,41637608,41646896,41650723,41653529,41656903,41658252,41661331,41663622	41621345,41622086,41636251,41636770,41637791,41647082,41650891,41653690,41657032,41658352,41661444,41664048	Gene ID= ENSG00000196419.12 TPM= 9.34 Transcript Type= protein_coding
chr22	41621350	41664039	41621350	41664039	+	ENST00000359308.8@XRCC6	ENST00000359308.8	protein_coding	41621350,41628118,41636113,41636516,41637608,41646896,41650723,41653529,41656903,41658252,41661331,41663622	41622086,41628230,41636251,41636770,41637791,41647082,41650891,41653690,41657032,41658352,41661444,41664039	Gene ID= ENSG00000196419.12 TPM= 30.94 Transcript Type= protein_coding
chr22	41639669	41641945	41639669	41641945	-	transcript2933.chr22.nnic@NA	transcript2933.chr22.nnic	NA	41639669	41641945	Gene ID= novel_gene_chr22_2934 TPM= 8.17 Transcript Type= NA
chr22	41673930	41688909	41673930	41688909	-	ENST00000355257.7@SNU13	ENST00000355257.7	protein_coding	41688794,41680244,41673930	41688909,41680364,41675195	Gene ID= ENSG00000100138.13 TPM= 66.55 Transcript Type= protein_coding
chr22	41687742	41688847	41687742	41688847	-	ENST00000469522.1@SNU13	ENST00000469522.1	protein_coding	41688794,41687742	41688847,41688327	Gene ID= ENSG00000100138.13 TPM= 2.34 Transcript Type= retained_intron
chr22	41686306	41688890	41686306	41688890	-	transcript2941.chr22.nnic@NA	transcript2941.chr22.nnic	NA	41686306	41688890	Gene ID= novel_gene_chr22_2942 TPM= 3.5 Transcript Type= NA
chr22	41688937	41698133	41688937	41698133	+	transcript2943.chr22.nnic@C22orf46	transcript2943.chr22.nnic	protein_coding	41688937,41690784,41693463,41693938	41689304,41690843,41693851,41698133	Gene ID= ENSG00000184208.10 TPM= 17.51 Transcript Type= NA
chr22	41800608	41826299	41800608	41826299	+	transcript2947.chr22.nnic@CCDC134	transcript2947.chr22.nnic	protein_coding	41800608,41800999,41808875,41809879,41810207,41813264,41813751,41825698	41800766,41801076,41808993,41810000,41810291,41813445,41813822,41826299	Gene ID= ENSG00000100147.13 TPM= 2.34 Transcript Type= NA
chr22	41800679	41826299	41800679	41826299	+	ENST00000255784.5@CCDC134	ENST00000255784.5	protein_coding	41800679,41808875,41809879,41810207,41813264,41813751,41825698	41800766,41808993,41810000,41810291,41813445,41813822,41826299	Gene ID= ENSG00000100147.13 TPM= 3.5 Transcript Type= protein_coding
chr22	41833105	41907308	41833105	41907308	+	ENST00000361204.8@SREBF2	ENST00000361204.8	protein_coding	41833105,41866831,41868611,41870889,41873798,41875337,41875543,41877229,41877942,41880716,41884842,41893117,41894820,41897052,41898649,41900330,41902970,41904863,41905440	41833358,41867280,41868792,41871035,41874019,41875451,41875724,41877421,41878123,41880992,41885011,41893285,41894937,41897161,41898781,41900498,41903155,41904974,41907308	Gene ID= ENSG00000198911.11 TPM= 180.3 Transcript Type= protein_coding
chr22	41833079	41907307	41833079	41907307	+	ENST00000612482.4@SREBF2	ENST00000612482.4	protein_coding	41833079,41866831,41868611,41870889,41873798,41875337,41875543,41877229,41877942,41878659,41880716,41884842,41893117,41894820,41897052,41898649,41900330,41902970,41904863,41905440	41833358,41867280,41868792,41871035,41874019,41875451,41875724,41877421,41878123,41878758,41880992,41885011,41893285,41894937,41897161,41898781,41900498,41903155,41904974,41907307	Gene ID= ENSG00000198911.11 TPM= 21.51 Transcript Type= protein_coding
chr22	41976810	41998221	41976810	41998221	+	ENST00000396426.7@SEPT3	ENST00000396426.7	protein_coding	41976810,41981645,41985984,41987206,41987622,41989567,41991573,41992664,41994290,41994621,41996902	41977074,41981836,41986112,41987287,41987759,41989684,41991668,41992763,41994341,41994714,41998221	Gene ID= ENSG00000100167.19 TPM= 1.17 Transcript Type= protein_coding
chr22	42059796	42070830	42059796	42070830	-	ENST00000403363.5@NAGA	ENST00000403363.5	protein_coding	42070763,42070282,42068439,42067765,42067113,42066710,42065738,42062827,42060924,42059796	42070830,42070366,42068574,42067936,42067290,42066804,42065899,42063024,42061067,42060413	Gene ID= ENSG00000198951.11 TPM= 1.17 Transcript Type= protein_coding
chr22	42058354	42070830	42058354	42070830	-	ENST00000396398.7@NAGA	ENST00000396398.7	protein_coding	42070282,42068439,42067765,42067113,42066710,42065738,42062827,42060924,42058354	42070830,42068574,42067936,42067290,42066804,42065899,42063024,42061067,42060413	Gene ID= ENSG00000198951.11 TPM= 57.21 Transcript Type= protein_coding
chr22	42059802	42070842	42059802	42070842	-	ENST00000402937.1@NAGA	ENST00000402937.1	protein_coding	42070763,42070282,42068439,42067765,42067113,42066710,42065738,42062827,42060924,42059802	42070842,42070373,42068574,42067936,42067290,42066804,42065899,42063024,42061067,42060413	Gene ID= ENSG00000198951.11 TPM= 16.35 Transcript Type= protein_coding
chr22	42074243	42079441	42074243	42079441	+	transcript3018.chr22.nic@FAM109B	transcript3018.chr22.nic	protein_coding	42074243,42077280	42075652,42079441	Gene ID= ENSG00000177096.8 TPM= 14.01 Transcript Type= NA
chr22	42074281	42079438	42074281	42079438	+	transcript3019.chr22.nnic@FAM109B	transcript3019.chr22.nnic	protein_coding	42074281,42077280	42074341,42079438	Gene ID= ENSG00000177096.8 TPM= 2.34 Transcript Type= NA
chr22	42074251	42079441	42074251	42079441	+	ENST00000321753.7@FAM109B	ENST00000321753.7	protein_coding	42074251,42075571,42077280	42074341,42075652,42079441	Gene ID= ENSG00000177096.8 TPM= 67.72 Transcript Type= protein_coding
chr22	42079730	42084284	42079730	42084284	+	transcript3025.chr22.nnic@SMDT1	transcript3025.chr22.nnic	protein_coding	42079730,42081925,42084070	42079954,42082065,42084284	Gene ID= ENSG00000183172.8 TPM= 2.34 Transcript Type= NA
chr22	42079691	42083353	42079691	42083353	+	ENST00000422252.1@SMDT1	ENST00000422252.1	protein_coding	42079691,42081925,42083119	42079905,42082065,42083353	Gene ID= ENSG00000183172.8 TPM= 7.01 Transcript Type= nonsense_mediated_decay
chr22	42079695	42084284	42079695	42084284	+	ENST00000331479.3@SMDT1	ENST00000331479.3	protein_coding	42079695,42081925,42083119	42079954,42082065,42084284	Gene ID= ENSG00000183172.8 TPM= 3.5 Transcript Type= protein_coding
chr22	42085525	42090955	42085525	42090955	-	ENST00000498737.6@NDUFA6	ENST00000498737.6	protein_coding	42090606,42087060,42085525	42090955,42087175,42086314	Gene ID= ENSG00000184983.9 TPM= 60.71 Transcript Type= protein_coding
chr22	42090956	42125349	42090956	42125349	+	ENST00000417327.5@NDUFA6-AS1	ENST00000417327.5	processed_transcript	42090956,42091297,42124047,42124875	42091181,42091600,42124562,42125349	Gene ID= ENSG00000237037.9 TPM= 3.5 Transcript Type= antisense_RNA
chr22	42380410	42432395	42380410	42432395	-	ENST00000329021.9@NFAM1	ENST00000329021.9	protein_coding	42432237,42411407,42409435,42397858,42386989,42380410	42432395,42411736,42409547,42397956,42387078,42385220	Gene ID= ENSG00000235568.6 TPM= 3.5 Transcript Type= protein_coding
chr22	42509968	42519802	42509968	42519802	-	ENST00000323013.6@RRP7A	ENST00000323013.6	protein_coding	42519714,42518005,42516011,42515151,42514682,42514106,42509968	42519802,42518147,42516136,42515268,42514779,42514304,42512995	Gene ID= ENSG00000189306.10 TPM= 12.84 Transcript Type= protein_coding
chr22	42553919	42574382	42553919	42574382	+	ENST00000327678.9@SERHL2	ENST00000327678.9	protein_coding	42553919,42554938,42555232,42555664,42556064,42556514,42558348,42560186,42566304,42571121,42572436,42573936	42554042,42555087,42555345,42555705,42556083,42556588,42558457,42560265,42566338,42571203,42572529,42574382	Gene ID= ENSG00000183569.17 TPM= 2.34 Transcript Type= protein_coding
chr22	42555223	42582038	42555223	42582038	-	ENST00000357802.6@RRP7BP	ENST00000357802.6	transcribed_unprocessed_pseudogene	42581929,42580217,42577844,42576981,42576512,42575931,42574680,42555223	42582038,42580359,42577962,42577098,42576609,42576126,42574818,42556674	Gene ID= ENSG00000182841.12 TPM= 16.35 Transcript Type= processed_transcript
chr22	42571769	42582038	42571769	42582038	-	transcript3066.chr22.nnic@RRP7BP	transcript3066.chr22.nnic	transcribed_unprocessed_pseudogene	42581929,42580217,42577844,42576981,42576512,42575931,42574680,42571769	42582038,42580359,42577962,42577098,42576609,42576126,42574818,42571883	Gene ID= ENSG00000182841.12 TPM= 5.84 Transcript Type= NA
chr22	42583721	42614962	42583721	42614962	-	ENST00000252115.9@POLDIP3	ENST00000252115.9	protein_coding	42614799,42602770,42601970,42599698,42596186,42595537,42591955,42587506,42583721	42614962,42603160,42602056,42599793,42596365,42595614,42592084,42587572,42585968	Gene ID= ENSG00000100227.17 TPM= 195.2 Transcript Type= protein_coding
chr22	42583721	42614931	42583721	42614931	-	ENST00000348657.6@POLDIP3	ENST00000348657.6	protein_coding	42614799,42602770,42599698,42596186,42595537,42591955,42587506,42583721	42614931,42603160,42599793,42596365,42595614,42592084,42587572,42585968	Gene ID= ENSG00000100227.17 TPM= 20.64 Transcript Type= protein_coding
chr22	42618808	42649568	42618808	42649568	-	ENST00000352397.9@CYB5R3	ENST00000352397.9	protein_coding	42649295,42636715,42631378,42630882,42628152,42627605,42627304,42623789,42618808	42649568,42636846,42631450,42630988,42628281,42627688,42627389,42623888,42619945	Gene ID= ENSG00000100243.20 TPM= 1014.93 Transcript Type= protein_coding
chr22	42692121	42720909	42692121	42720909	-	transcript3116.chr22.nnic@A4GALT	transcript3116.chr22.nnic	protein_coding	42720797,42695491,42692121	42720909,42695631,42693997	Gene ID= ENSG00000128274.15 TPM= 25.3 Transcript Type= NA
chr22	42692122	42720909	42692122	42720909	-	transcript3117.chr22.nnic@A4GALT	transcript3117.chr22.nnic	protein_coding	42720797,42695575,42692122	42720909,42695631,42693997	Gene ID= ENSG00000128274.15 TPM= 6.62 Transcript Type= NA
chr22	42692118	42720909	42692118	42720909	-	transcript3118.chr22.nnic@A4GALT	transcript3118.chr22.nnic	protein_coding	42720797,42692118	42720909,42695631	Gene ID= ENSG00000128274.15 TPM= 2.34 Transcript Type= NA
chr22	42692121	42695633	42692121	42695633	-	ENST00000249005.2@A4GALT	ENST00000249005.2	protein_coding	42695491,42692121	42695633,42693997	Gene ID= ENSG00000128274.15 TPM= 5.45 Transcript Type= protein_coding
chr22	42796502	42857402	42796502	42857402	-	ENST00000263245.9@ARFGAP3	ENST00000263245.9	protein_coding	42857114,42847514,42840944,42835362,42834242,42831549,42826940,42823656,42822270,42817729,42817142,42810813,42808767,42807073,42799039,42796502	42857402,42847632,42841016,42835493,42834325,42831636,42826999,42823702,42822409,42817857,42817264,42810944,42808890,42807163,42799160,42797605	Gene ID= ENSG00000242247.10 TPM= 140.11 Transcript Type= protein_coding
chr22	42796528	42801297	42796528	42801297	-	transcript3163.chr22.nnic@NA	transcript3163.chr22.nnic	NA	42796528	42801297	Gene ID= novel_gene_chr22_3164 TPM= 3.5 Transcript Type= NA
chr22	42869771	42959888	42869771	42959888	-	transcript3134.chr22.nic@PACSIN2	transcript3134.chr22.nic	protein_coding	42959799,42912021,42893457,42890947,42888643,42884386,42882184,42879048,42876888,42876137,42869771	42959888,42912157,42893613,42891182,42888798,42884561,42882304,42879169,42877010,42876333,42871469	Gene ID= ENSG00000100266.18 TPM= 19.07 Transcript Type= NA
chr22	42869771	43015152	42869771	43015152	-	transcript3146.chr22.nnic@PACSIN2	transcript3146.chr22.nnic	protein_coding	43015021,42893457,42890947,42888643,42884386,42882184,42879048,42876888,42876137,42869771	43015152,42893613,42891182,42888798,42884561,42882304,42879169,42877010,42876333,42871469	Gene ID= ENSG00000100266.18 TPM= 20.23 Transcript Type= NA
chr22	42869771	43015115	42869771	43015115	-	transcript3148.chr22.nic@PACSIN2	transcript3148.chr22.nic	protein_coding	43015021,42912021,42893457,42890947,42888643,42884386,42879048,42876888,42876137,42869771	43015115,42912157,42893613,42891182,42888798,42884561,42882304,42877010,42876333,42871469	Gene ID= ENSG00000100266.18 TPM= 7.39 Transcript Type= NA
chr22	42869771	43015145	42869771	43015145	-	ENST00000263246.7@PACSIN2	ENST00000263246.7	protein_coding	43015021,42912021,42893457,42890947,42888643,42884386,42882184,42879048,42876888,42876137,42869771	43015145,42912157,42893613,42891182,42888798,42884561,42882304,42879169,42877010,42876333,42871469	Gene ID= ENSG00000100266.18 TPM= 240.91 Transcript Type= protein_coding
chr22	43012655	43014738	43012655	43014738	-	transcript3165.chr22.nnic@NA	transcript3165.chr22.nnic	NA	43012655	43014738	Gene ID= novel_gene_chr22_3166 TPM= 2.34 Transcript Type= NA
chr22	43039644	43089425	43039644	43089425	-	transcript3167.chr22.nnic@TTLL1	transcript3167.chr22.nnic	protein_coding	43089277,43079902,43075474,43071926,43069636,43068410,43064190,43063813,43059384,43051801,43046410,43039644	43089425,43079986,43075590,43072072,43069844,43068590,43064324,43063921,43059527,43051887,43046573,43039905	Gene ID= ENSG00000100271.16 TPM= 3.3 Transcript Type= NA
chr22	43039644	43089425	43039644	43089425	-	transcript3169.chr22.nic@TTLL1	transcript3169.chr22.nic	protein_coding	43089277,43079902,43075474,43069604,43068410,43064190,43063813,43059384,43051801,43046410,43039644	43089425,43079986,43075590,43069844,43068590,43064324,43063921,43059527,43051887,43046573,43039905	Gene ID= ENSG00000100271.16 TPM= 3.89 Transcript Type= NA
chr22	43039644	43089428	43039644	43089428	-	ENST00000266254.11@TTLL1	ENST00000266254.11	protein_coding	43089277,43079902,43075474,43069636,43068410,43064190,43063813,43059384,43051801,43046410,43039644	43089428,43079986,43075590,43069844,43068590,43064324,43063921,43059527,43051887,43046573,43039905	Gene ID= ENSG00000100271.16 TPM= 12.65 Transcript Type= protein_coding
chr22	43110748	43129712	43110748	43129712	+	ENST00000216115.2@BIK	ENST00000216115.2	protein_coding	43110748,43124016,43127697,43128496,43129213	43110803,43124183,43127795,43128625,43129712	Gene ID= ENSG00000100290.2 TPM= 1.17 Transcript Type= protein_coding
chr22	43132880	43143364	43132880	43143364	-	ENST00000327555.5@MCAT	ENST00000327555.5	protein_coding	43142926,43141162,43132880	43143364,43141249,43133486	Gene ID= ENSG00000100294.12 TPM= 15.18 Transcript Type= protein_coding
chr22	43151514	43163242	43151514	43163242	+	ENST00000337554.7@TSPO	ENST00000337554.7	protein_coding	43151514,43159210,43161052,43162803	43151604,43159420,43161190,43163242	Gene ID= ENSG00000100300.17 TPM= 336.65 Transcript Type= protein_coding
chr22	43151547	43163241	43151547	43163241	+	ENST00000583777.5@TSPO	ENST00000583777.5	protein_coding	43151547,43161052,43162803	43151604,43161190,43163241	Gene ID= ENSG00000100300.17 TPM= 20.82 Transcript Type= protein_coding
chr22	43151935	43163241	43151935	43163241	+	ENST00000396265.4@TSPO	ENST00000396265.4	protein_coding	43151935,43159210,43161052,43162803	43152220,43159420,43161190,43163241	Gene ID= ENSG00000100300.17 TPM= 21.99 Transcript Type= protein_coding
chr22	43164366	43187159	43164366	43187159	-	transcript3178.chr22.nnic@TTLL12	transcript3178.chr22.nnic	protein_coding	43186893,43182980,43180742,43179841,43179619,43176320,43174499,43174209,43173715,43172403,43171819,43169500,43168774,43168093,43164366	43187159,43183149,43180940,43180000,43179752,43176396,43174615,43174403,43173826,43172554,43171900,43169568,43168912,43168159,43164959	Gene ID= ENSG00000100304.12 TPM= 2.34 Transcript Type= NA
chr22	43166622	43187131	43166622	43187131	-	transcript3186.chr22.nnic@TTLL12	transcript3186.chr22.nnic	protein_coding	43186893,43180742,43179841,43179619,43176320,43174499,43174209,43173715,43172403,43171819,43169500,43168774,43166622	43187131,43180940,43180000,43179752,43176396,43174615,43174403,43173826,43172554,43171900,43169568,43168912,43168159	Gene ID= ENSG00000100304.12 TPM= 4.09 Transcript Type= NA
chr22	43166622	43187133	43166622	43187133	-	ENST00000216129.6@TTLL12	ENST00000216129.6	protein_coding	43186893,43182980,43180742,43179841,43179619,43176320,43174499,43174209,43173715,43172403,43171819,43169500,43168774,43166622	43187133,43183149,43180940,43180000,43179752,43176396,43174615,43174403,43173826,43172554,43171900,43169568,43168912,43168159	Gene ID= ENSG00000100304.12 TPM= 84.65 Transcript Type= protein_coding
chr22	43197283	43343388	43197283	43343388	-	ENST00000360835.8@SCUBE1	ENST00000360835.8	protein_coding	43343174,43339104,43319937,43291046,43262720,43258219,43238838,43231753,43229072,43227374,43223097,43222638,43221173,43220450,43218255,43214090,43212425,43210922,43210043,43208072,43207534,43197283	43343388,43339235,43320065,43291180,43262845,43258335,43238954,43231875,43229188,43227496,43223216,43222742,43221289,43220587,43218458,43214251,43212592,43211083,43210240,43208224,43207613,43204149	Gene ID= ENSG00000159307.18 TPM= 89.9 Transcript Type= protein_coding
chr22	43237576	43343323	43237576	43343323	-	ENST00000290460.7@SCUBE1	ENST00000290460.7	protein_coding	43343174,43339104,43319937,43291046,43262720,43258219,43255488,43237576	43343323,43339235,43320065,43291180,43262845,43258335,43255577,43238954	Gene ID= ENSG00000159307.18 TPM= 1.17 Transcript Type= protein_coding
chr22	43955414	43996529	43955414	43996529	+	transcript3210.chr22.nnic@SAMM50	transcript3210.chr22.nnic	protein_coding	43955414,43963286,43964452,43968731,43972236,43972871,43973236,43976055,43976750,43977872,43981391,43983933,43988897,43990265,43996338	43955598,43963396,43964553,43968818,43972342,43973001,43973323,43976183,43976821,43977958,43981461,43984000,43989257,43990406,43996529	Gene ID= ENSG00000100347.14 TPM= 7.01 Transcript Type= NA
chr22	43955421	43996533	43955421	43996533	+	ENST00000350028.4@SAMM50	ENST00000350028.4	protein_coding	43955421,43963286,43964452,43968731,43972236,43972871,43973236,43976055,43976750,43977872,43981391,43983933,43989111,43990265,43996338	43955598,43963396,43964553,43968818,43972342,43973001,43973323,43976183,43976821,43977958,43981461,43984000,43989257,43990406,43996533	Gene ID= ENSG00000100347.14 TPM= 61.88 Transcript Type= protein_coding
chr22	44024256	44168923	44024256	44168923	+	transcript3212.chr22.nnic@PARVB	transcript3212.chr22.nnic	protein_coding	44024256,44039836,44093928,44100053,44119038,44131487,44132894,44136460,44140124,44147861,44151483,44157982,44163858,44168602	44024451,44039957,44094017,44100123,44119140,44131627,44133009,44136518,44140143,44147922,44151551,44158083,44163930,44168923	Gene ID= ENSG00000188677.14 TPM= 4.67 Transcript Type= NA
chr22	44024277	44172949	44024277	44172949	+	ENST00000338758.11@PARVB	ENST00000338758.11	protein_coding	44024277,44093928,44100053,44119038,44131487,44132894,44136460,44140124,44147861,44151483,44157982,44163858,44168602	44024451,44094017,44100123,44119140,44131627,44133009,44136518,44140143,44147922,44151551,44158083,44163930,44172949	Gene ID= ENSG00000188677.14 TPM= 9.34 Transcript Type= protein_coding
chr22	44026312	44168923	44026312	44168923	+	transcript3216.chr22.nic@PARVB	transcript3216.chr22.nic	protein_coding	44026312,44093928,44100053,44119038,44131487,44132894,44136460,44140124,44147861,44151483,44157982,44163858,44168602	44026376,44094017,44100123,44119140,44131627,44133009,44136518,44140143,44147922,44151551,44158083,44163930,44168923	Gene ID= ENSG00000188677.14 TPM= 4.67 Transcript Type= NA
chr22	44111434	44115971	44111434	44115971	-	transcript3219.chr22.nnic@NA	transcript3219.chr22.nnic	NA	44115636,44115377,44114255,44111434	44115971,44115560,44114470,44112698	Gene ID= novel_gene_chr22_3220 TPM= 3.5 Transcript Type= NA
chr22	44120843	44123533	44120843	44123533	-	transcript3222.chr22.nnic@NA	transcript3222.chr22.nnic	NA	44120843	44123533	Gene ID= novel_gene_chr22_3223 TPM= 2.34 Transcript Type= NA
chr22	44172956	44208468	44172956	44208468	+	ENST00000422871.5@PARVG	ENST00000422871.5	protein_coding	44172956,44181742,44183318,44185808,44187776,44189114,44190551,44192049,44193801,44196155,44196347,44198621,44205757,44206317	44173191,44181917,44183408,44185872,44187878,44189254,44190666,44192104,44193823,44196213,44196415,44198722,44205829,44208468	Gene ID= ENSG00000138964.16 TPM= 7.01 Transcript Type= protein_coding
chr22	44181323	44206635	44181323	44206635	+	transcript3226.chr22.nic@PARVG	transcript3226.chr22.nic	protein_coding	44181323,44181742,44183318,44185808,44186577,44189114,44190551,44192049,44193801,44196155,44196347,44198621,44205757,44206317	44181370,44181917,44183408,44185872,44187878,44189254,44190666,44192104,44193823,44196213,44196415,44198722,44205829,44206635	Gene ID= ENSG00000138964.16 TPM= 2.34 Transcript Type= NA
chr22	44181323	44206635	44181323	44206635	+	transcript3227.chr22.nic@PARVG	transcript3227.chr22.nic	protein_coding	44181323,44181742,44183318,44185808,44187776,44189114,44190551,44192049,44193801,44196155,44196347,44198621,44205757,44206317	44181370,44181917,44183408,44185872,44187878,44189254,44190666,44192104,44193823,44196213,44196415,44198722,44205829,44206635	Gene ID= ENSG00000138964.16 TPM= 5.84 Transcript Type= NA
chr22	44172915	44206635	44172915	44206635	+	transcript3232.chr22.nic@PARVG	transcript3232.chr22.nic	protein_coding	44172915,44183318,44185808,44186577,44189114,44190551,44192049,44193801,44196155,44196347,44198621,44205757,44206317	44173191,44183408,44185872,44187878,44189254,44190666,44192104,44193823,44196213,44196415,44198722,44205829,44206635	Gene ID= ENSG00000138964.16 TPM= 3.5 Transcript Type= NA
chr22	44172915	44206635	44172915	44206635	+	transcript3233.chr22.nic@PARVG	transcript3233.chr22.nic	protein_coding	44172915,44183318,44185808,44187776,44189114,44190551,44192049,44193801,44196155,44196347,44198621,44205757,44206317	44173191,44183408,44185872,44187878,44189254,44190666,44192104,44193823,44196213,44196415,44198722,44205829,44206635	Gene ID= ENSG00000138964.16 TPM= 4.67 Transcript Type= NA
chr22	44172954	44206635	44172954	44206635	+	transcript3234.chr22.nic@PARVG	transcript3234.chr22.nic	protein_coding	44172954,44181742,44183318,44185808,44189114,44190551,44192049,44193801,44196155,44196347,44198621,44205757,44206317	44173191,44181917,44183408,44187878,44189254,44190666,44192104,44193823,44196213,44196415,44198722,44205829,44206635	Gene ID= ENSG00000138964.16 TPM= 2.34 Transcript Type= NA
chr22	44172915	44206635	44172915	44206635	+	transcript3240.chr22.nnic@PARVG	transcript3240.chr22.nnic	protein_coding	44172915,44183318,44185808,44189085,44190551,44192049,44193801,44196155,44196347,44198621,44205757,44206317	44173191,44183408,44187878,44189254,44190666,44192104,44193823,44196213,44196415,44198722,44205829,44206635	Gene ID= ENSG00000138964.16 TPM= 2.34 Transcript Type= NA
chr22	44172941	44206635	44172941	44206635	+	transcript3242.chr22.nnic@PARVG	transcript3242.chr22.nnic	protein_coding	44172941,44185808,44187776,44189114,44190551,44192049,44193801,44196155,44196347,44198621,44205757,44206317	44173191,44185872,44187878,44189254,44190666,44192104,44193823,44196213,44196415,44198722,44205829,44206635	Gene ID= ENSG00000138964.16 TPM= 4.67 Transcript Type= NA
chr22	44181373	44206635	44181373	44206635	+	transcript3243.chr22.nic@PARVG	transcript3243.chr22.nic	protein_coding	44181373,44183318,44185808,44189114,44190551,44192049,44193801,44196155,44196347,44198621,44205757,44206317	44181917,44183408,44187878,44189254,44190666,44192104,44193823,44196213,44196415,44198722,44205829,44206635	Gene ID= ENSG00000138964.16 TPM= 2.34 Transcript Type= NA
chr22	44492572	44498298	44492572	44498298	-	ENST00000341255.3@RTL6	ENST00000341255.3	protein_coding	44498044,44492572	44498298,44497811	Gene ID= ENSG00000188636.3 TPM= 54.88 Transcript Type= protein_coding
chr22	44752558	44862784	44752558	44862784	+	ENST00000389774.6@ARHGAP8	ENST00000389774.6	protein_coding	44752558,44786457,44802077,44808307,44809006,44814672,44822371,44825483,44845269,44847973,44848932,44859731,44862275	44752627,44786606,44802164,44808438,44809098,44814758,44822469,44825593,44845342,44848050,44849060,44859834,44862784	Gene ID= ENSG00000241484.9 TPM= 2.34 Transcript Type= protein_coding
chr22	44752574	44850963	44752574	44850963	+	ENST00000460809.5@ARHGAP8	ENST00000460809.5	protein_coding	44752574,44786457,44802077,44808307,44814672,44822371,44825483,44845269,44847973,44848932	44752627,44786606,44802164,44808438,44814758,44822469,44825593,44845342,44848050,44850963	Gene ID= ENSG00000241484.9 TPM= 3.5 Transcript Type= retained_intron
chr22	45133020	45163781	45133020	45163781	-	ENST00000426282.6@NUP50-AS1	ENST00000426282.6	lincRNA	45163577,45138824,45133020	45163781,45138916,45134797	Gene ID= ENSG00000226328.6 TPM= 1.17 Transcript Type= lincRNA
chr22	45163919	45188015	45163919	45188015	+	transcript3290.chr22.nic@NUP50	transcript3290.chr22.nic	protein_coding	45163919,45168168,45170988,45171600,45175894,45178238,45181286,45183402,45184453	45164296,45168246,45171177,45171683,45176080,45178900,45181367,45183520,45188015	Gene ID= ENSG00000093000.18 TPM= 5.36 Transcript Type= NA
chr22	45163919	45188015	45163919	45188015	+	transcript3291.chr22.nnic@NUP50	transcript3291.chr22.nnic	protein_coding	45163919,45168168,45171600,45173952,45175894,45178238,45181286,45183402,45184453	45164296,45168246,45171683,45174018,45176080,45178900,45181367,45183520,45188015	Gene ID= ENSG00000093000.18 TPM= 5.36 Transcript Type= NA
chr22	45163946	45188015	45163946	45188015	+	transcript3295.chr22.nic@NUP50	transcript3295.chr22.nic	protein_coding	45163946,45166309,45168168,45171600,45175894,45178238,45181286,45183402,45184453	45164296,45166430,45168246,45171683,45176080,45178900,45181367,45183520,45188015	Gene ID= ENSG00000093000.18 TPM= 4.19 Transcript Type= NA
chr22	45163841	45188015	45163841	45188015	+	ENST00000347635.8@NUP50	ENST00000347635.8	protein_coding	45163841,45168168,45171600,45175894,45178238,45181286,45183402,45184453	45164296,45168246,45171683,45176080,45178900,45181367,45183520,45188015	Gene ID= ENSG00000093000.18 TPM= 63.16 Transcript Type= protein_coding
chr22	45163986	45188015	45163986	45188015	+	transcript3306.chr22.nic@NUP50	transcript3306.chr22.nic	protein_coding	45163986,45168168,45171600,45178238,45181286,45183402,45184453	45164296,45168246,45171683,45178900,45181367,45183520,45188015	Gene ID= ENSG00000093000.18 TPM= 3.9 Transcript Type= NA
chr22	45169355	45170909	45169355	45170909	-	transcript3309.chr22.nnic@NA	transcript3309.chr22.nnic	NA	45169355	45170909	Gene ID= novel_gene_chr22_3310 TPM= 2.34 Transcript Type= NA
chr22	45195828	45212488	45195828	45212488	-	ENST00000251993.11@KIAA0930	ENST00000251993.11	protein_coding	45212265,45211956,45205793,45205630,45205217,45203845,45202990,45199873,45197790,45195828	45212488,45212107,45205912,45205707,45205318,45203985,45203184,45200035,45197948,45197216	Gene ID= ENSG00000100364.18 TPM= 7.2 Transcript Type= protein_coding
chr22	45196038	45212457	45196038	45212457	-	ENST00000488038.5@KIAA0930	ENST00000488038.5	protein_coding	45211956,45205793,45205630,45205217,45203845,45202990,45199873,45197790,45196038	45212457,45205912,45205707,45205318,45203985,45203184,45200035,45197948,45197216	Gene ID= ENSG00000100364.18 TPM= 12.84 Transcript Type= retained_intron
chr22	45192242	45192779	45192242	45192779	-	transcript3311.chr22.nnic@NA	transcript3311.chr22.nnic	NA	45192242	45192779	Gene ID= novel_gene_chr22_3312 TPM= 2.34 Transcript Type= NA
chr22	45309937	45341955	45309937	45341955	+	transcript3320.chr22.nnic@FAM118A	transcript3320.chr22.nnic	protein_coding	45309937,45322371,45323175,45330603,45332425,45335350,45336328,45340386	45310183,45322426,45323427,45330731,45332710,45335382,45336411,45341955	Gene ID= ENSG00000100376.11 TPM= 3.5 Transcript Type= NA
chr22	45309973	45328783	45309973	45328783	+	transcript3322.chr22.nnic@FAM118A	transcript3322.chr22.nnic	protein_coding	45309973,45322371,45323175,45328004	45310183,45322426,45323386,45328783	Gene ID= ENSG00000100376.11 TPM= 2.34 Transcript Type= NA
chr22	45502891	45601135	45502891	45601135	+	ENST00000327858.10@FBLN1	ENST00000327858.10	protein_coding	45502891,45518682,45525543,45527847,45531265,45533063,45533761,45535200,45541229,45542155,45543401,45547085,45548613,45550492,45574511,45576977,45600307	45503064,45518787,45525678,45528009,45531324,45533164,45533898,45535337,45541372,45542283,45543526,45547204,45548744,45550615,45574653,45577108,45601135	Gene ID= ENSG00000077942.18 TPM= 425 Transcript Type= protein_coding
chr22	45502883	45563362	45502883	45563362	+	ENST00000262722.11@FBLN1	ENST00000262722.11	protein_coding	45502883,45518682,45525543,45527847,45531265,45533063,45533761,45535200,45541229,45542155,45543401,45547085,45548613,45550492,45562912	45503064,45518787,45525678,45528009,45531324,45533164,45533898,45535337,45541372,45542283,45543526,45547204,45548744,45550615,45563362	Gene ID= ENSG00000077942.18 TPM= 279.05 Transcript Type= protein_coding
chr22	45671799	45845307	45671799	45845307	+	ENST00000252934.9@ATXN10	ENST00000252934.9	protein_coding	45671799,45689712,45692996,45700282,45702689,45718413,45729425,45738731,45740369,45806959,45842991,45843669	45672179,45689903,45693078,45700378,45702847,45718493,45729590,45738839,45740538,45807022,45843178,45845307	Gene ID= ENSG00000130638.16 TPM= 129.02 Transcript Type= protein_coding
chr22	45671802	45741699	45671802	45741699	+	transcript3358.chr22.nic@ATXN10	transcript3358.chr22.nic	protein_coding	45671802,45689712,45692996,45700282,45702689,45718413,45729425,45738731,45740369	45672179,45689903,45693078,45700378,45702847,45718493,45729590,45738839,45741699	Gene ID= ENSG00000130638.16 TPM= 4.09 Transcript Type= NA
chr22	45704127	45713105	45704127	45713105	-	transcript3360.chr22.nnic@NA	transcript3360.chr22.nnic	NA	45704127	45713105	Gene ID= novel_gene_chr22_3361 TPM= 2.34 Transcript Type= NA
chr22	46013606	46015498	46013606	46015498	+	ENST00000608290.1@BX537318.1	ENST00000608290.1	lincRNA	46013606,46014497	46013810,46015498	Gene ID= ENSG00000273145.1 TPM= 3.5 Transcript Type= lincRNA
chr22	46053705	46057210	46053705	46057210	+	ENST00000416202.5@PRR34-AS1	ENST00000416202.5	antisense_RNA	46053705,46056847,46057062	46053920,46056945,46057210	Gene ID= ENSG00000241990.5 TPM= 15.18 Transcript Type= antisense_RNA
chr22	46071715	46111666	46071715	46111666	+	transcript3371.chr22.nnic@MIRLET7BHG	transcript3371.chr22.nnic	lincRNA	46071715,46097926,46098494,46109267	46072648,46098010,46098558,46111666	Gene ID= ENSG00000197182.14 TPM= 13.43 Transcript Type= NA
chr22	46071715	46102652	46071715	46102652	+	transcript3379.chr22.nnic@MIRLET7BHG	transcript3379.chr22.nnic	lincRNA	46071715,46097926,46098494	46072648,46098010,46102652	Gene ID= ENSG00000197182.14 TPM= 5.84 Transcript Type= NA
chr22	46107703	46111666	46107703	46111666	+	transcript3383.chr22.nic@MIRLET7BHG	transcript3383.chr22.nic	lincRNA	46107703,46109764	46109353,46111666	Gene ID= ENSG00000197182.14 TPM= 6.42 Transcript Type= NA
chr22	46070041	46072931	46070041	46072931	+	transcript3385.chr22.nnic@NA	transcript3385.chr22.nnic	NA	46070041	46072931	Gene ID= novel_gene_chr22_3386 TPM= 2.34 Transcript Type= NA
chr22	46072967	46078629	46072967	46078629	-	transcript3389.chr22.nnic@NA	transcript3389.chr22.nnic	NA	46072967	46078629	Gene ID= novel_gene_chr22_3390 TPM= 72.39 Transcript Type= NA
chr22	46079331	46081276	46079331	46081276	+	transcript3387.chr22.nnic@NA	transcript3387.chr22.nnic	NA	46079331	46081276	Gene ID= novel_gene_chr22_3388 TPM= 2.34 Transcript Type= NA
chr22	46082803	46087070	46082803	46087070	-	transcript3391.chr22.nnic@NA	transcript3391.chr22.nnic	NA	46082803	46087070	Gene ID= novel_gene_chr22_3392 TPM= 17.51 Transcript Type= NA
chr22	46101112	46107403	46101112	46107403	-	transcript3393.chr22.nnic@NA	transcript3393.chr22.nnic	NA	46101112	46107403	Gene ID= novel_gene_chr22_3394 TPM= 10.51 Transcript Type= NA
chr22	46244013	46250679	46244013	46250679	-	ENST00000314567.7@CDPF1	ENST00000314567.7	protein_coding	46250256,46248172,46247110,46244013	46250679,46248284,46247221,46245238	Gene ID= ENSG00000205643.10 TPM= 7.01 Transcript Type= protein_coding
chr22	46250405	46252186	46250405	46252186	+	transcript3403.chr22.nnic@NA	transcript3403.chr22.nnic	NA	46250405	46252186	Gene ID= novel_gene_chr22_3404 TPM= 3.5 Transcript Type= NA
chr22	46267964	46294001	46267964	46294001	+	transcript3407.chr22.nic@TTC38	transcript3407.chr22.nic	protein_coding	46267964,46268514,46272335,46273898,46275248,46278586,46281599,46283973,46285241,46287073,46288423,46289402,46289826,46292203,46292791	46268072,46268591,46272416,46274069,46275421,46278661,46281718,46284032,46285279,46287154,46288588,46289561,46289899,46292328,46294001	Gene ID= ENSG00000075234.16 TPM= 8.76 Transcript Type= NA
chr22	46267964	46294008	46267964	46294008	+	ENST00000381031.7@TTC38	ENST00000381031.7	protein_coding	46267964,46268514,46272335,46273898,46275248,46278586,46281599,46283973,46285241,46287073,46288423,46289402,46289826,46292791	46268072,46268591,46272416,46274069,46275421,46278661,46281718,46284032,46285279,46287154,46288588,46289561,46289899,46294008	Gene ID= ENSG00000075234.16 TPM= 39.11 Transcript Type= protein_coding
chr22	46296741	46330810	46296741	46330810	+	ENST00000454366.1@GTSE1	ENST00000454366.1	protein_coding	46296741,46297380,46308150,46308319,46312141,46313890,46316032,46323190,46326436,46328688,46329358,46330047	46296931,46297479,46308207,46308943,46312305,46314013,46316412,46323262,46326654,46328889,46329567,46330810	Gene ID= ENSG00000075218.18 TPM= 1.17 Transcript Type= protein_coding
chr22	46458124	46463536	46458124	46463536	+	transcript3428.chr22.nnic@NA	transcript3428.chr22.nnic	NA	46458124	46463536	Gene ID= novel_gene_chr22_3429 TPM= 3.5 Transcript Type= NA
chr22	46537701	46541581	46537701	46541581	+	transcript3432.chr22.nnic@NA	transcript3432.chr22.nnic	NA	46537701	46541581	Gene ID= novel_gene_chr22_3433 TPM= 2.34 Transcript Type= NA
chr22	46537722	46539463	46537722	46539463	+	transcript3430.chr22.nnic@NA	transcript3430.chr22.nnic	NA	46537722	46539463	Gene ID= novel_gene_chr22_3431 TPM= 4.67 Transcript Type= NA
chr22	46547065	46553360	46547065	46553360	+	transcript3436.chr22.nnic@AL021392.1	transcript3436.chr22.nnic	antisense_RNA	46547065,46552016	46549023,46553360	Gene ID= ENSG00000234869.1 TPM= 2.34 Transcript Type= NA
chr22	46577067	46679785	46577067	46679785	+	transcript3439.chr22.nic@GRAMD4	transcript3439.chr22.nic	protein_coding	46577067,46626751,46637840,46658187,46661381,46663040,46663838,46664026,46665615,46666825,46668096,46668689,46668799,46672843,46673670,46674657,46675468,46676600,46677147	46577290,46626961,46637960,46658307,46661442,46663172,46663863,46664117,46665706,46666873,46668167,46668732,46668908,46672997,46673814,46674750,46675552,46676668,46679785	Gene ID= ENSG00000075240.16 TPM= 119.09 Transcript Type= NA
chr22	46577075	46580982	46577075	46580982	+	transcript3445.chr22.nnic@NA	transcript3445.chr22.nnic	NA	46577075	46580982	Gene ID= novel_gene_chr22_3446 TPM= 12.84 Transcript Type= NA
chr22	46684412	46738255	46684412	46738255	-	transcript3448.chr22.nnic@CERK	transcript3448.chr22.nnic	protein_coding	46738007,46720902,46720086,46712168,46711086,46707843,46701636,46699313,46695210,46693427,46691572,46689992,46687103,46684412	46738255,46721015,46720208,46712293,46711149,46707988,46701710,46699465,46695315,46693503,46691777,46690200,46687206,46686639	Gene ID= ENSG00000100422.13 TPM= 2.34 Transcript Type= NA
chr22	46684411	46738261	46684411	46738261	-	ENST00000216264.12@CERK	ENST00000216264.12	protein_coding	46738007,46720902,46720086,46712168,46711086,46707843,46701636,46699313,46695210,46693427,46691572,46689992,46684411	46738261,46721015,46720208,46712293,46711149,46707988,46701710,46699465,46695315,46693503,46691777,46690200,46687206	Gene ID= ENSG00000100422.13 TPM= 72.39 Transcript Type= protein_coding
chr22	46762621	47175693	46762621	47175693	+	ENST00000337137.8@TBC1D22A	ENST00000337137.8	protein_coding	46762621,46792520,46793501,46797444,46878653,46891266,46894784,46912074,46974290,46997634,47037071,47111508,47173498	46762848,46792576,46793841,46797620,46878723,46891394,46894846,46912188,46974399,46997709,47037198,47111603,47175693	Gene ID= ENSG00000054611.13 TPM= 45.54 Transcript Type= protein_coding
chr22	46773927	47174092	46773927	47174092	+	ENST00000406733.1@TBC1D22A	ENST00000406733.1	protein_coding	46773927,46792520,46793501,46797444,46878653,46891266,46894784,46912074,46974290,46997634,47037071,47111508,47173498	46774235,46792576,46793841,46797620,46878723,46891394,46894846,46912188,46974399,46997709,47037198,47111603,47174092	Gene ID= ENSG00000054611.13 TPM= 7.01 Transcript Type= protein_coding
chr22	46801669	47174087	46801669	47174087	+	transcript3473.chr22.nnic@TBC1D22A	transcript3473.chr22.nnic	protein_coding	46801669,46878653,46891266,46894784,46912074,46974290,46997634,47037071,47111508,47173498	46802138,46878723,46891394,46894846,46912188,46974399,46997709,47037198,47111603,47174087	Gene ID= ENSG00000054611.13 TPM= 3.5 Transcript Type= NA
chr22	46781142	46787335	46781142	46787335	-	transcript3477.chr22.nnic@NA	transcript3477.chr22.nnic	NA	46781142	46787335	Gene ID= novel_gene_chr22_3478 TPM= 3.5 Transcript Type= NA
chr22	46825887	46831787	46825887	46831787	-	transcript3475.chr22.nnic@NA	transcript3475.chr22.nnic	NA	46825887	46831787	Gene ID= novel_gene_chr22_3476 TPM= 4.67 Transcript Type= NA
chr22	48489460	48750823	48489460	48750823	+	ENST00000402357.5@FAM19A5	ENST00000402357.5	protein_coding	48489460,48646597,48707717,48749839	48489704,48646746,48707844,48750823	Gene ID= ENSG00000219438.8 TPM= 2.34 Transcript Type= protein_coding
chr22	48540598	48544620	48540598	48544620	-	transcript3484.chr22.nnic@NA	transcript3484.chr22.nnic	NA	48540598	48544620	Gene ID= novel_gene_chr22_3485 TPM= 2.34 Transcript Type= NA
chr22	49605698	49657353	49605698	49657353	-	transcript3490.chr22.nnic@C22orf34	transcript3490.chr22.nnic	lincRNA	49657113,49605698	49657353,49609725	Gene ID= ENSG00000188511.12 TPM= 3.5 Transcript Type= NA
chr22	49773283	49827879	49773283	49827879	-	transcript3497.chr22.nic@BRD1	transcript3497.chr22.nic	protein_coding	49827497,49822951,49804204,49798988,49798558,49797805,49794034,49787390,49777678,49777034,49776050,49775591,49773283	49827879,49824331,49804360,49799119,49798686,49798117,49794294,49787494,49777813,49777161,49776159,49775745,49774416	Gene ID= ENSG00000100425.18 TPM= 33.47 Transcript Type= NA
chr22	49773283	49819985	49773283	49819985	-	transcript3501.chr22.nnic@BRD1	transcript3501.chr22.nnic	protein_coding	49819135,49804204,49798988,49798558,49797805,49794034,49787390,49777678,49777034,49776050,49775591,49773283	49819985,49804360,49799119,49798686,49798117,49794294,49787494,49777813,49777161,49776159,49775745,49774416	Gene ID= ENSG00000100425.18 TPM= 7.79 Transcript Type= NA
chr22	49773283	49827512	49773283	49827512	-	ENST00000404760.5@BRD1	ENST00000404760.5	protein_coding	49827497,49822951,49804204,49798988,49798558,49797805,49794034,49787390,49777678,49777034,49776050,49775591,49773283	49827512,49824331,49804360,49799119,49798686,49798117,49794294,49787887,49777813,49777161,49776159,49775745,49774416	Gene ID= ENSG00000100425.18 TPM= 6.62 Transcript Type= protein_coding
chr22	49810018	49812574	49810018	49812574	+	transcript3507.chr22.nnic@NA	transcript3507.chr22.nnic	NA	49810018	49812574	Gene ID= novel_gene_chr22_3508 TPM= 2.34 Transcript Type= NA
chr22	49853827	49888442	49853827	49888442	+	transcript3509.chr22.nnic@ZBED4	transcript3509.chr22.nnic	protein_coding	49853827,49883334	49854480,49888442	Gene ID= ENSG00000100426.6 TPM= 2.92 Transcript Type= NA
chr22	49853842	49890078	49853842	49890078	+	ENST00000216268.5@ZBED4	ENST00000216268.5	protein_coding	49853842,49883334	49853989,49890078	Gene ID= ENSG00000100426.6 TPM= 6.42 Transcript Type= protein_coding
chr22	49903208	49918478	49903208	49918478	-	transcript3529.chr22.nic@ALG12	transcript3529.chr22.nic	protein_coding	49918263,49913604,49913385,49910434,49909894,49909244,49907721,49904337,49903208	49918478,49913843,49913517,49910607,49910088,49909347,49907944,49904506,49904254	Gene ID= ENSG00000182858.13 TPM= 8.76 Transcript Type= NA
chr22	49903208	49908969	49903208	49908969	-	transcript3533.chr22.nic@ALG12	transcript3533.chr22.nic	protein_coding	49907721,49904337,49903208	49908969,49904506,49904254	Gene ID= ENSG00000182858.13 TPM= 5.25 Transcript Type= NA
chr22	49900229	49918458	49900229	49918458	-	ENST00000330817.10@ALG12	ENST00000330817.10	protein_coding	49918263,49913604,49913385,49910434,49909894,49909244,49907721,49904337,49904179,49900229	49918458,49913843,49913517,49910607,49910088,49909347,49907944,49904506,49904254,49904066	Gene ID= ENSG00000182858.13 TPM= 9.34 Transcript Type= protein_coding
chr22	49918625	49927528	49918625	49927528	+	transcript3528.chr22.nic@CRELD2	transcript3528.chr22.nic	protein_coding	49918625,49919230,49919730,49920156,49921585,49922612,49923234,49925417,49927255	49918898,49919312,49919840,49920247,49921761,49922707,49924455,49925557,49927528	Gene ID= ENSG00000184164.14 TPM= 4.67 Transcript Type= NA
chr22	49918635	49927540	49918635	49927540	+	ENST00000404488.7@CRELD2	ENST00000404488.7	protein_coding	49918635,49919230,49919730,49920156,49921585,49922297,49922612,49923234,49924360,49925417,49927255	49918898,49919312,49919840,49920247,49921761,49922443,49922707,49923317,49924455,49925557,49927540	Gene ID= ENSG00000184164.14 TPM= 26.56 Transcript Type= protein_coding
chr22	49918696	49927528	49918696	49927528	+	ENST00000328268.8@CRELD2	ENST00000328268.8	protein_coding	49918696,49919230,49919730,49920156,49921585,49922612,49923234,49924360,49925417,49927255	49918898,49919312,49919840,49920247,49921761,49922707,49923317,49924455,49925557,49927528	Gene ID= ENSG00000184164.14 TPM= 97.79 Transcript Type= protein_coding
chr22	49933185	49935294	49933185	49935294	-	transcript3534.chr22.nnic@NA	transcript3534.chr22.nnic	NA	49933185	49935294	Gene ID= novel_gene_chr22_3535 TPM= 2.34 Transcript Type= NA
chr22	49960462	49964080	49960462	49964080	+	transcript3539.chr22.nic@PIM3	transcript3539.chr22.nic	protein_coding	49960462,49961318,49961442,49962689,49962940	49961234,49961368,49961811,49962865,49964080	Gene ID= ENSG00000198355.4 TPM= 65.39 Transcript Type= NA
chr22	49960513	49964080	49960513	49964080	+	ENST00000360612.4@PIM3	ENST00000360612.4	protein_coding	49960513,49961125,49961318,49961442,49962689,49962940	49961032,49961234,49961368,49961811,49962865,49964080	Gene ID= ENSG00000198355.4 TPM= 814.98 Transcript Type= protein_coding
chr22	49960754	49964071	49960754	49964071	+	transcript3548.chr22.nnic@NA	transcript3548.chr22.nnic	NA	49960754	49964071	Gene ID= novel_gene_chr22_3549 TPM= 15.18 Transcript Type= NA
chr22	50059395	50085459	50059395	50085459	-	transcript3550.chr22.nnic@MLC1	transcript3550.chr22.nnic	protein_coding	50085355,50084726,50083084,50080344,50079918,50077401,50076841,50074216,50070527,50068433,50064034,50060811,50059395	50085459,50084961,50083173,50080397,50080019,50077502,50076912,50074332,50070583,50068555,50064198,50061657,50060708	Gene ID= ENSG00000100427.15 TPM= 7.01 Transcript Type= NA
chr22	50059391	50085354	50059391	50085354	-	ENST00000395876.6@MLC1	ENST00000395876.6	protein_coding	50085139,50084726,50083084,50080344,50079918,50077401,50076841,50074216,50070527,50068433,50064034,50059391	50085354,50084961,50083173,50080397,50080019,50077502,50076912,50074332,50070583,50068555,50064198,50061657	Gene ID= ENSG00000100427.15 TPM= 3.5 Transcript Type= protein_coding
chr22	50170731	50180294	50170731	50180294	+	ENST00000395842.2@PANX2	ENST00000395842.2	protein_coding	50170731,50176939,50178934	50170956,50178402,50180294	Gene ID= ENSG00000073150.13 TPM= 11.68 Transcript Type= protein_coding
chr22	50185913	50199595	50185913	50199595	+	transcript3569.chr22.nic@TRABD	transcript3569.chr22.nic	protein_coding	50185913,50193027,50193576,50194340,50194900,50197241,50197449,50197823,50198345	50185976,50193093,50193654,50194506,50195040,50197351,50197588,50198186,50199595	Gene ID= ENSG00000170638.9 TPM= 10.45 Transcript Type= NA
chr22	50185915	50199564	50185915	50199564	+	ENST00000380909.8@TRABD	ENST00000380909.8	protein_coding	50185915,50193027,50193576,50194340,50194900,50197241,50197449,50197823,50198075,50198345	50185976,50193093,50193654,50194506,50195040,50197351,50197588,50197995,50198186,50199564	Gene ID= ENSG00000170638.9 TPM= 26.85 Transcript Type= protein_coding
chr22	50185917	50199598	50185917	50199598	+	ENST00000303434.8@TRABD	ENST00000303434.8	protein_coding	50185917,50193027,50193576,50194340,50194900,50197241,50197449,50197823,50198075,50198345	50186001,50193093,50193654,50194506,50195040,50197351,50197588,50197995,50198186,50199598	Gene ID= ENSG00000170638.9 TPM= 31.47 Transcript Type= protein_coding
chr22	50185918	50199595	50185918	50199595	+	ENST00000463233.1@TRABD	ENST00000463233.1	protein_coding	50185918,50193027,50193576,50194340,50194900,50197241,50197449,50197823,50198345	50186001,50193093,50193654,50194506,50195040,50197351,50197588,50198186,50199595	Gene ID= ENSG00000170638.9 TPM= 22.13 Transcript Type= retained_intron
chr22	50199087	50200879	50199087	50200879	-	transcript3583.chr22.nnic@NA	transcript3583.chr22.nnic	NA	50199087	50200879	Gene ID= novel_gene_chr22_3584 TPM= 9.57 Transcript Type= NA
chr22	50199090	50200837	50199090	50200837	-	ENST00000608025.2@AL022328.4	ENST00000608025.2	antisense_RNA	50200076,50199090	50200837,50199328	Gene ID= ENSG00000273253.2 TPM= 4.67 Transcript Type= antisense_RNA
chr22	50201013	50217616	50201013	50217616	+	transcript3593.chr22.nnic@SELENOO	transcript3593.chr22.nnic	protein_coding	50201013,50204919,50206317,50208536,50210181,50210631,50215717,50216691,50216972,50217205	50201590,50205024,50206462,50208716,50210311,50210911,50215867,50216876,50217128,50217616	Gene ID= ENSG00000073169.13 TPM= 5.25 Transcript Type= NA
chr22	50200984	50217616	50200984	50217616	+	transcript3597.chr22.nnic@SELENOO	transcript3597.chr22.nnic	protein_coding	50200984,50206317,50208536,50210181,50210631,50215717,50216691,50216972,50217205	50201590,50206462,50208716,50210311,50210911,50215867,50216876,50217128,50217616	Gene ID= ENSG00000073169.13 TPM= 5.25 Transcript Type= NA
chr22	50200979	50217616	50200979	50217616	+	ENST00000380903.6@SELENOO	ENST00000380903.6	protein_coding	50200979,50206317,50208536,50210181,50210631,50215717,50216691,50216972,50217205	50201590,50206520,50208716,50210311,50210911,50215867,50216876,50217128,50217616	Gene ID= ENSG00000073169.13 TPM= 60.13 Transcript Type= protein_coding
chr22	50208155	50217616	50208155	50217616	+	transcript3605.chr22.nic@SELENOO	transcript3605.chr22.nic	protein_coding	50208155,50210631,50215717,50216691,50216972,50217205	50210311,50210911,50215867,50216876,50217128,50217616	Gene ID= ENSG00000073169.13 TPM= 12.26 Transcript Type= NA
chr22	50201013	50208446	50201013	50208446	+	transcript3606.chr22.nnic@SELENOO	transcript3606.chr22.nnic	protein_coding	50201013,50204919,50206317	50201590,50205024,50208446	Gene ID= ENSG00000073169.13 TPM= 2.34 Transcript Type= NA
chr22	50200984	50208446	50200984	50208446	+	transcript3607.chr22.nic@SELENOO	transcript3607.chr22.nic	protein_coding	50200984,50206317	50201590,50208446	Gene ID= ENSG00000073169.13 TPM= 4.67 Transcript Type= NA
chr22	50201012	50204004	50201012	50204004	+	transcript3608.chr22.nnic@NA	transcript3608.chr22.nnic	NA	50201012	50204004	Gene ID= novel_gene_chr22_3609 TPM= 4.67 Transcript Type= NA
chr22	50217694	50245028	50217694	50245028	-	transcript3588.chr22.nic@TUBGCP6	transcript3588.chr22.nic	protein_coding	50243719,50240204,50233316,50229404,50227907,50226999,50226733,50226287,50226050,50225794,50224511,50224332,50224141,50222454,50222028,50219957,50219644,50219288,50219068,50218703,50218488,50218189,50217918,50217694	50245028,50240367,50233526,50229577,50228028,50227077,50226842,50226378,50226189,50225943,50224592,50224420,50224256,50222592,50222102,50221874,50219791,50219456,50219209,50218897,50218620,50218402,50218117,50217827	Gene ID= ENSG00000128159.11 TPM= 37.95 Transcript Type= NA
chr22	50217689	50244992	50217689	50244992	-	ENST00000498611.5@TUBGCP6	ENST00000498611.5	protein_coding	50243719,50240204,50233316,50229404,50227907,50226999,50226733,50226287,50226050,50225794,50224511,50224332,50224141,50222454,50222028,50221275,50219957,50219288,50219068,50218703,50218488,50217918,50217689	50244992,50240367,50233526,50229577,50228028,50227077,50226842,50226378,50226189,50225943,50224592,50224420,50224256,50222592,50222102,50221874,50220015,50219791,50219209,50218897,50218620,50218402,50217827	Gene ID= ENSG00000128159.11 TPM= 16.93 Transcript Type= retained_intron
chr22	50245183	50251385	50245183	50251385	-	ENST00000216271.9@HDAC10	ENST00000216271.9	protein_coding	50250974,50250771,50250427,50250063,50249860,50249635,50249328,50249103,50248831,50248662,50248366,50248225,50247890,50247692,50246875,50246679,50246298,50245910,50245675,50245183	50251385,50250905,50250523,50250160,50249964,50249703,50249454,50249168,50248890,50248751,50248472,50248292,50248145,50247776,50246966,50246735,50246376,50246092,50245827,50245530	Gene ID= ENSG00000100429.17 TPM= 19.85 Transcript Type= protein_coding
chr22	50245183	50251380	50245183	50251380	-	transcript3612.chr22.nic@HDAC10	transcript3612.chr22.nic	protein_coding	50251102,50250771,50250427,50250063,50249860,50249635,50249328,50249103,50248831,50248662,50248366,50248225,50247890,50247692,50246875,50246679,50246298,50245910,50245675,50245183	50251380,50250905,50250523,50250160,50249964,50249703,50249454,50249168,50248890,50248751,50248472,50248292,50248145,50247776,50246966,50246735,50246376,50246092,50245827,50245530	Gene ID= ENSG00000100429.17 TPM= 11.68 Transcript Type= NA
chr22	50245388	50247012	50245388	50247012	+	transcript3629.chr22.nnic@NA	transcript3629.chr22.nnic	NA	50245388	50247012	Gene ID= novel_gene_chr22_3630 TPM= 2.34 Transcript Type= NA
chr22	50252903	50261723	50252903	50261723	-	transcript3636.chr22.nnic@MAPK12	transcript3636.chr22.nnic	protein_coding	50261649,50261385,50261167,50258243,50257082,50256935,50256599,50256085,50255810,50255615,50255453,50255197,50252903	50261723,50261491,50261296,50258301,50257193,50256964,50256646,50256199,50255881,50255694,50255531,50255370,50253480	Gene ID= ENSG00000188130.13 TPM= 2.57 Transcript Type= NA
chr22	50252903	50261825	50252903	50261825	-	ENST00000215659.12@MAPK12	ENST00000215659.12	protein_coding	50261385,50261167,50258243,50257082,50256935,50256599,50256085,50255810,50255615,50255453,50255197,50252903	50261825,50261296,50258301,50257193,50256964,50256646,50256199,50255881,50255694,50255531,50255370,50253480	Gene ID= ENSG00000188130.13 TPM= 27.09 Transcript Type= protein_coding
chr22	50252903	50261739	50252903	50261739	-	transcript3646.chr22.nnic@MAPK12	transcript3646.chr22.nnic	protein_coding	50261444,50261167,50258243,50257082,50256935,50256599,50256085,50255810,50255615,50255453,50255197,50252903	50261739,50261296,50258301,50257193,50256964,50256646,50256199,50255881,50255694,50255531,50255370,50253480	Gene ID= ENSG00000188130.13 TPM= 2.57 Transcript Type= NA
chr22	50253783	50261804	50253783	50261804	-	transcript3650.chr22.nnic@MAPK12	transcript3650.chr22.nnic	protein_coding	50261385,50261167,50258243,50257082,50256935,50256599,50256085,50255810,50255615,50255453,50255197,50253783	50261804,50261296,50258301,50257193,50256964,50256646,50256199,50255881,50255694,50255531,50255370,50254486	Gene ID= ENSG00000188130.13 TPM= 3.5 Transcript Type= NA
chr22	50252903	50261682	50252903	50261682	-	transcript3653.chr22.nic@MAPK12	transcript3653.chr22.nic	protein_coding	50261167,50258243,50257082,50256935,50256599,50256085,50255810,50255615,50255453,50255197,50252903	50261682,50258301,50257193,50256964,50256646,50256199,50255881,50255694,50255531,50255370,50253480	Gene ID= ENSG00000188130.13 TPM= 2.57 Transcript Type= NA
chr22	50253783	50261681	50253783	50261681	-	transcript3657.chr22.nnic@MAPK12	transcript3657.chr22.nnic	protein_coding	50261385,50261167,50257082,50256935,50256599,50256085,50255810,50255615,50255453,50255197,50253783	50261681,50261296,50258301,50256964,50256646,50256199,50255905,50255694,50255531,50255370,50254486	Gene ID= ENSG00000188130.13 TPM= 2.34 Transcript Type= NA
chr22	50253788	50261746	50253788	50261746	-	transcript3659.chr22.nic@MAPK12	transcript3659.chr22.nic	protein_coding	50261385,50261167,50258243,50257082,50256935,50256599,50256085,50255810,50255615,50255453,50253788	50261746,50261296,50258301,50257193,50256964,50256646,50256199,50255881,50255694,50255531,50255370	Gene ID= ENSG00000188130.13 TPM= 3.5 Transcript Type= NA
chr22	50252903	50261800	50252903	50261800	-	transcript3662.chr22.nic@MAPK12	transcript3662.chr22.nic	protein_coding	50261167,50258243,50257082,50256599,50256085,50255810,50255615,50255453,50255197,50252903	50261800,50258301,50257660,50256964,50256199,50255881,50255694,50255531,50255370,50253480	Gene ID= ENSG00000188130.13 TPM= 2.34 Transcript Type= NA
chr22	50252903	50261716	50252903	50261716	-	ENST00000622558.4@MAPK12	ENST00000622558.4	protein_coding	50261385,50261167,50258243,50257082,50256599,50256085,50255810,50255615,50255453,50255197,50252903	50261716,50261296,50258301,50257193,50256646,50256199,50255881,50255694,50255531,50255370,50253480	Gene ID= ENSG00000188130.13 TPM= 2.57 Transcript Type= protein_coding
chr22	50263713	50270395	50263713	50270395	-	transcript3643.chr22.nnic@MAPK11	transcript3643.chr22.nnic	protein_coding	50270177,50267820,50267569,50267371,50267257,50267127,50266934,50266540,50266226,50265582,50265321,50264122,50263713	50270395,50267949,50267627,50267482,50267286,50267174,50267048,50266611,50266305,50265660,50265494,50265027,50264031	Gene ID= ENSG00000185386.14 TPM= 3.5 Transcript Type= NA
chr22	50274977	50276691	50274977	50276691	-	transcript3674.chr22.nnic@NA	transcript3674.chr22.nnic	NA	50274977	50276691	Gene ID= novel_gene_chr22_3675 TPM= 19.85 Transcript Type= NA
chr22	50274979	50307665	50274979	50307665	-	transcript3665.chr22.nnic@PLXNB2	transcript3665.chr22.nnic	protein_coding	50307553,50295377,50294719,50289517,50288960,50288743,50287937,50287667,50287111,50286173,50285990,50285800,50284573,50284132,50283833,50283602,50283337,50283050,50282711,50282184,50281854,50281566,50281360,50281089,50280744,50280489,50280005,50279630,50278855,50278596,50278435,50278117,50277853,50277591,50276842,50276629,50275889,50274979	50307665,50295429,50294778,50290597,50289142,50288871,50288037,50287793,50287264,50286287,50286098,50285901,50284665,50284213,50283990,50283750,50283445,50283186,50282881,50282313,50282081,50281742,50281499,50281189,50280973,50280670,50280071,50279776,50279011,50278696,50278519,50278271,50278013,50277738,50276906,50276704,50275963,50275808	Gene ID= ENSG00000196576.14 TPM= 99.62 Transcript Type= NA
chr22	50274979	50307627	50274979	50307627	-	ENST00000449103.5@PLXNB2	ENST00000449103.5	protein_coding	50307553,50294726,50289517,50288960,50288743,50287937,50287667,50287111,50286173,50285990,50285800,50284573,50284132,50283833,50283602,50283337,50283050,50282711,50282184,50281854,50281566,50281360,50281089,50280744,50280489,50280005,50279630,50278855,50278596,50278435,50278117,50277853,50277591,50276842,50276629,50275889,50274979	50307627,50294778,50290597,50289142,50288871,50288037,50287793,50287264,50286287,50286098,50285901,50284665,50284213,50283990,50283750,50283445,50283186,50282881,50282313,50282081,50281742,50281499,50281189,50280973,50280670,50280071,50279776,50279011,50278696,50278519,50278271,50278013,50277738,50276906,50276704,50275963,50275808	Gene ID= ENSG00000196576.14 TPM= 85.61 Transcript Type= protein_coding
chr22	50274985	50281934	50274985	50281934	-	ENST00000463165.1@PLXNB2	ENST00000463165.1	protein_coding	50281854,50281360,50281089,50280744,50280489,50280005,50279630,50278855,50278596,50278435,50278117,50277853,50277591,50276842,50276629,50275889,50274985	50281934,50281742,50281189,50280973,50280670,50280071,50279776,50279011,50278696,50278519,50278271,50278013,50277738,50276906,50276704,50275963,50275808	Gene ID= ENSG00000196576.14 TPM= 20.32 Transcript Type= retained_intron
chr22	50311966	50327000	50311966	50327000	-	transcript3676.chr22.nic@DENND6B	transcript3676.chr22.nic	protein_coding	50326812,50318965,50318847,50317908,50317293,50316566,50316370,50316174,50316025,50315714,50314799,50314605,50314400,50314207,50313814,50313635,50313446,50312999,50312523,50312343,50311966	50327000,50319003,50318889,50318020,50317373,50316712,50316475,50316253,50316087,50315769,50314921,50314700,50314494,50314272,50313878,50313724,50313499,50313108,50312625,50312417,50312261	Gene ID= ENSG00000205593.11 TPM= 9.92 Transcript Type= NA
chr22	50311966	50326997	50311966	50326997	-	transcript3682.chr22.nic@DENND6B	transcript3682.chr22.nic	protein_coding	50326812,50318965,50318847,50317908,50317293,50316566,50316370,50316174,50316025,50315714,50314799,50314605,50314400,50313814,50313635,50313446,50312999,50312523,50312343,50311966	50326997,50319003,50318889,50318020,50317373,50316626,50316475,50316253,50316087,50315769,50314921,50314700,50314494,50314272,50313724,50313499,50313108,50312625,50312417,50312261	Gene ID= ENSG00000205593.11 TPM= 8.17 Transcript Type= NA
chr22	50311966	50314554	50311966	50314554	-	transcript3684.chr22.nic@DENND6B	transcript3684.chr22.nic	protein_coding	50314400,50314207,50313814,50313635,50313446,50312999,50312523,50312343,50311966	50314554,50314272,50313878,50313724,50313499,50313108,50312625,50312417,50312261	Gene ID= ENSG00000205593.11 TPM= 6.42 Transcript Type= NA
chr22	50327215	50328082	50327215	50328082	+	transcript3685.chr22.nnic@NA	transcript3685.chr22.nnic	NA	50327215	50328082	Gene ID= novel_gene_chr22_3686 TPM= 2.34 Transcript Type= NA
chr22	50343299	50444391	50343299	50444391	+	transcript3697.chr22.nnic@PPP6R2	transcript3697.chr22.nnic	protein_coding	50343299,50372020,50388986,50393893,50406689,50414552,50416092,50418867,50419349,50422254,50423462,50431173,50432265,50434966,50436367,50436988,50437506,50437843,50438174,50438599,50439701,50439961,50440822,50443866,50444199	50343550,50372150,50389111,50394135,50406875,50414689,50416157,50418979,50419462,50422380,50423614,50431382,50432329,50435081,50436452,50437068,50437603,50437900,50438298,50438762,50439857,50440049,50441026,50444117,50444391	Gene ID= ENSG00000100239.15 TPM= 7.24 Transcript Type= NA
chr22	50343299	50444391	50343299	50444391	+	transcript3710.chr22.nnic@PPP6R2	transcript3710.chr22.nnic	protein_coding	50343299,50372020,50393893,50406735,50414552,50416092,50418867,50419349,50422254,50423462,50431173,50432265,50434966,50436367,50436988,50437506,50437843,50438174,50438599,50439701,50439961,50440822,50443866,50444199	50343550,50372150,50394135,50406875,50414689,50416157,50418979,50419462,50422380,50423614,50431382,50432329,50435081,50436452,50437068,50437603,50437900,50438298,50438762,50439857,50440049,50441026,50444117,50444391	Gene ID= ENSG00000100239.15 TPM= 6.07 Transcript Type= NA
chr22	50343317	50445090	50343317	50445090	+	ENST00000612753.4@PPP6R2	ENST00000612753.4	protein_coding	50343317,50372020,50393893,50406689,50414552,50416092,50418867,50419349,50422254,50423462,50431173,50432265,50434966,50436367,50436988,50437506,50437843,50438174,50438599,50439701,50439961,50440822,50443866,50444199	50343550,50372150,50394135,50406875,50414689,50416157,50418979,50419462,50422380,50423614,50431382,50432329,50435081,50436452,50437068,50437603,50437900,50438298,50438762,50439857,50440049,50441026,50444117,50445090	Gene ID= ENSG00000100239.15 TPM= 22.8 Transcript Type= protein_coding
chr22	50343331	50444374	50343331	50444374	+	ENST00000395744.7@PPP6R2	ENST00000395744.7	protein_coding	50343331,50372020,50393893,50406689,50414552,50416092,50418867,50419349,50422254,50423462,50431173,50432265,50434966,50436367,50437506,50437843,50438174,50438599,50439701,50439961,50440822,50443866,50444199	50343550,50372150,50394135,50406875,50414689,50416157,50418979,50419462,50422380,50423614,50431382,50432329,50435081,50436452,50437603,50437900,50438298,50438762,50439857,50440049,50441026,50444117,50444374	Gene ID= ENSG00000100239.15 TPM= 12.06 Transcript Type= protein_coding
chr22	50443087	50444378	50443087	50444378	+	ENST00000470046.1@PPP6R2	ENST00000470046.1	protein_coding	50443087,50444199	50444117,50444378	Gene ID= ENSG00000100239.15 TPM= 2.34 Transcript Type= retained_intron
chr22	50359219	50361084	50359219	50361084	-	transcript3737.chr22.nnic@NA	transcript3737.chr22.nnic	NA	50359219	50361084	Gene ID= novel_gene_chr22_3738 TPM= 3.5 Transcript Type= NA
chr22	50446806	50475048	50446806	50475048	-	transcript3688.chr22.nic@SBF1	transcript3688.chr22.nic	protein_coding	50474786,50468376,50467786,50467532,50467338,50466605,50466350,50466150,50465961,50465763,50465215,50465001,50464819,50464534,50464329,50463283,50462870,50462559,50462205,50461947,50461796,50461523,50461159,50460534,50460272,50459952,50459470,50459255,50457034,50456492,50456216,50455481,50455224,50455016,50454814,50454512,50448543,50448233,50447522,50447322,50446806	50475048,50468461,50467923,50467693,50467448,50466710,50466482,50466258,50466074,50465840,50465328,50465129,50464917,50464738,50464441,50463432,50462938,50462717,50462473,50462119,50461869,50461718,50461286,50460712,50460408,50460159,50459666,50459392,50457111,50456673,50456395,50455582,50455409,50455142,50454944,50454742,50448650,50448444,50447609,50447453,50447240	Gene ID= ENSG00000100241.20 TPM= 26.95 Transcript Type= NA
chr22	50446806	50475048	50446806	50475048	-	transcript3691.chr22.nic@SBF1	transcript3691.chr22.nic	protein_coding	50474786,50468376,50467786,50467532,50467338,50466605,50466350,50466150,50465961,50465763,50465215,50465001,50464819,50464534,50464329,50463283,50462870,50462559,50462205,50461947,50461796,50461523,50461159,50460534,50460272,50459470,50459255,50457034,50456492,50456216,50455481,50455224,50455016,50454814,50454512,50448543,50448233,50447522,50447322,50446806	50475048,50468461,50467923,50467690,50467448,50466710,50466482,50466258,50466074,50465840,50465328,50465129,50464917,50464738,50464441,50463432,50462938,50462717,50462473,50462119,50461869,50461718,50461286,50460712,50460408,50460159,50459392,50457111,50456673,50456395,50455582,50455409,50455142,50454944,50454742,50448650,50448444,50447609,50447453,50447240	Gene ID= ENSG00000100241.20 TPM= 9.43 Transcript Type= NA
chr22	50446806	50475048	50446806	50475048	-	transcript3692.chr22.nic@SBF1	transcript3692.chr22.nic	protein_coding	50474786,50468376,50467786,50467532,50467338,50466605,50466350,50466150,50465961,50465763,50465215,50465001,50464819,50464534,50464329,50463283,50462870,50462559,50462205,50461947,50461796,50461523,50461159,50460534,50460272,50459952,50459470,50459255,50456492,50456216,50455481,50455224,50455016,50454814,50454512,50448543,50448233,50447522,50447322,50446806	50475048,50468461,50467923,50467690,50467448,50466710,50466482,50466258,50466074,50465840,50465328,50465129,50464917,50464738,50464441,50463432,50462938,50462717,50462473,50462119,50461869,50461718,50461286,50460712,50460408,50460159,50459666,50459392,50456673,50456395,50455582,50455409,50455142,50454944,50454742,50448650,50448444,50447609,50447453,50447240	Gene ID= ENSG00000100241.20 TPM= 17.02 Transcript Type= NA
chr22	50445000	50475024	50445000	50475024	-	ENST00000380817.7@SBF1	ENST00000380817.7	protein_coding	50474786,50468376,50467786,50467532,50467338,50466605,50466350,50466150,50465961,50465763,50465215,50465001,50464819,50464534,50464329,50463283,50462870,50462559,50462205,50461947,50461796,50461523,50461159,50460534,50460272,50459952,50459470,50459255,50457034,50456492,50456216,50455481,50455224,50455016,50454814,50454512,50448543,50448233,50447522,50447322,50445000	50475024,50468461,50467923,50467690,50467448,50466710,50466482,50466258,50466074,50465840,50465328,50465129,50464917,50464738,50464441,50463432,50462938,50462717,50462473,50462119,50461869,50461718,50461286,50460712,50460408,50460159,50459666,50459392,50457111,50456673,50456395,50455582,50455409,50455142,50454944,50454742,50448650,50448444,50447609,50447453,50447240	Gene ID= ENSG00000100241.20 TPM= 22.48 Transcript Type= protein_coding
chr22	50502949	50507713	50502949	50507713	-	transcript3754.chr22.nnic@LMF2	transcript3754.chr22.nnic	protein_coding	50507582,50506782,50506638,50506285,50506035,50505674,50505403,50505229,50505057,50504802,50504559,50504340,50503808,50502949	50507713,50507035,50506666,50506502,50506213,50505815,50505537,50505334,50505153,50504984,50504727,50504434,50503904,50503699	Gene ID= ENSG00000100258.17 TPM= 6.69 Transcript Type= NA
chr22	50502949	50507713	50502949	50507713	-	transcript3780.chr22.nic@LMF2	transcript3780.chr22.nic	protein_coding	50507582,50506782,50506638,50506285,50506035,50505674,50505403,50505229,50505057,50504802,50504340,50503808,50502949	50507713,50507035,50506666,50506502,50506213,50505815,50505537,50505334,50505153,50504984,50504727,50503904,50503699	Gene ID= ENSG00000100258.17 TPM= 16.32 Transcript Type= NA
chr22	50502949	50507691	50502949	50507691	-	ENST00000474879.6@LMF2	ENST00000474879.6	protein_coding	50507582,50506782,50506638,50506285,50506035,50505674,50505403,50505229,50505057,50504802,50504559,50504340,50503808,50502949	50507691,50507035,50506666,50506502,50506213,50505815,50505537,50505334,50505153,50504984,50504727,50504451,50503904,50503699	Gene ID= ENSG00000100258.17 TPM= 160.32 Transcript Type= protein_coding
chr22	50502951	50507684	50502951	50507684	-	ENST00000216080.5@LMF2	ENST00000216080.5	protein_coding	50507582,50506782,50506638,50506285,50506035,50505674,50505403,50505229,50505057,50504802,50504559,50504340,50503808,50502951	50507684,50507120,50506666,50506502,50506213,50505815,50505537,50505334,50505153,50504984,50504727,50504451,50503904,50503699	Gene ID= ENSG00000100258.17 TPM= 14.37 Transcript Type= protein_coding
chr22	50508236	50523472	50508236	50523472	+	transcript3747.chr22.nic@NCAPH2	transcript3747.chr22.nic	protein_coding	50508236,50516447,50517427,50517577,50517741,50517973,50518133,50518649,50519190,50520965,50521543,50521741,50521986,50522181,50522343,50522501,50522671,50523017,50523235	50508445,50516548,50517482,50517661,50517809,50518052,50518278,50518732,50519320,50521036,50521609,50521848,50522039,50522251,50522415,50522569,50522922,50523166,50523472	Gene ID= ENSG00000025770.18 TPM= 18.68 Transcript Type= NA
chr22	50508260	50523472	50508260	50523472	+	ENST00000299821.15@NCAPH2	ENST00000299821.15	protein_coding	50508260,50516447,50517427,50517577,50517741,50517973,50518133,50518649,50519190,50520965,50521543,50521741,50521986,50522181,50522343,50522498,50522671,50522821,50523017,50523235	50508445,50516548,50517482,50517661,50517809,50518052,50518278,50518732,50519320,50521036,50521609,50521848,50522039,50522251,50522415,50522569,50522720,50522922,50523166,50523472	Gene ID= ENSG00000025770.18 TPM= 19.85 Transcript Type= protein_coding
chr22	50523568	50525606	50523568	50525606	-	ENST00000395693.7@SCO2	ENST00000395693.7	protein_coding	50525472,50523568	50525606,50524424	Gene ID= ENSG00000130489.14 TPM= 38.53 Transcript Type= protein_coding
chr22	50525752	50530331	50525752	50530331	-	transcript3802.chr22.nic@TYMP	transcript3802.chr22.nic	protein_coding	50529136,50528512,50527588,50527165,50526576,50526246,50526001,50525752	50530331,50528610,50527717,50527283,50526738,50526476,50526141,50525918	Gene ID= ENSG00000025708.13 TPM= 24.29 Transcript Type= NA
chr22	50525752	50530056	50525752	50530056	-	ENST00000252029.7@TYMP	ENST00000252029.7	protein_coding	50529904,50529496,50529136,50528512,50527588,50527165,50526576,50526246,50526001,50525752	50530056,50529719,50529338,50528610,50527717,50527283,50526738,50526476,50526141,50525918	Gene ID= ENSG00000025708.13 TPM= 255.78 Transcript Type= protein_coding
chr22	50525756	50530032	50525756	50530032	-	ENST00000395678.7@TYMP	ENST00000395678.7	protein_coding	50529904,50529496,50529136,50528512,50527588,50527165,50526576,50526246,50526001,50525756	50530032,50529731,50529338,50528610,50527717,50527283,50526738,50526476,50526141,50525918	Gene ID= ENSG00000025708.13 TPM= 55.19 Transcript Type= protein_coding
chr22	50525752	50530015	50525752	50530015	-	ENST00000395681.5@TYMP	ENST00000395681.5	protein_coding	50529904,50529496,50529136,50528512,50527588,50527165,50526576,50526246,50526001,50525752	50530015,50529719,50529338,50528610,50527717,50527283,50526738,50526476,50526156,50525918	Gene ID= ENSG00000025708.13 TPM= 4.64 Transcript Type= protein_coding
chr22	50525755	50529996	50525755	50529996	-	ENST00000487577.5@TYMP	ENST00000487577.5	protein_coding	50529496,50529136,50528512,50527588,50527165,50526576,50526246,50526001,50525755	50529996,50529338,50528610,50527717,50527283,50526738,50526476,50526141,50525918	Gene ID= ENSG00000025708.13 TPM= 47.4 Transcript Type= retained_intron
chr22	50525752	50529999	50525752	50529999	-	ENST00000395680.5@TYMP	ENST00000395680.5	protein_coding	50529904,50529496,50529136,50528512,50527588,50527165,50526576,50526246,50526001,50525752	50529999,50529754,50529338,50528610,50527717,50527283,50526738,50526476,50526141,50525918	Gene ID= ENSG00000025708.13 TPM= 7.47 Transcript Type= protein_coding
chr22	50525785	50529990	50525785	50529990	-	ENST00000425169.1@TYMP	ENST00000425169.1	protein_coding	50529904,50529496,50529136,50527588,50527165,50526576,50526246,50526001,50525785	50529990,50529719,50529338,50527717,50527283,50526738,50526476,50526141,50525918	Gene ID= ENSG00000025708.13 TPM= 1.17 Transcript Type= protein_coding
chr22	50527792	50530012	50527792	50530012	-	ENST00000487162.1@TYMP	ENST00000487162.1	protein_coding	50529904,50527792	50530012,50529731	Gene ID= ENSG00000025708.13 TPM= 10.51 Transcript Type= retained_intron
chr22	50530409	50532579	50530409	50532579	-	ENST00000329363.8@ODF3B	ENST00000329363.8	protein_coding	50532477,50531969,50531570,50531191,50530937,50530712,50530409	50532579,50532111,50531773,50531295,50531058,50530852,50530560	Gene ID= ENSG00000177989.13 TPM= 4.67 Transcript Type= protein_coding
chr22	50530426	50532555	50530426	50532555	-	transcript3819.chr22.nnic@ODF3B	transcript3819.chr22.nnic	protein_coding	50532477,50531191,50530937,50530712,50530426	50532555,50532378,50531058,50530852,50530560	Gene ID= ENSG00000177989.13 TPM= 14.01 Transcript Type= NA
chr22	50551112	50562905	50551112	50562905	-	ENST00000406915.3@SYCE3	ENST00000406915.3	protein_coding	50562858,50556297,50551112	50562905,50556405,50551402	Gene ID= ENSG00000217442.3 TPM= 1.17 Transcript Type= protein_coding
chr22	50568861	50582849	50568861	50582849	-	transcript3848.chr22.nic@CHKB-CPT1B	transcript3848.chr22.nic	protein_coding	50581749,50581420,50580565,50580358,50580190,50579974,50579727,50579426,50579036,50577775,50576536,50576198,50576035,50574493,50574335,50573520,50572875,50572203,50572006,50571375,50571158,50570891,50570293,50569576,50569336,50568861	50582849,50581553,50580660,50580416,50580271,50580082,50579802,50579507,50579255,50577934,50577463,50576335,50576112,50574600,50574419,50573715,50573060,50572308,50572122,50571539,50571292,50571043,50570406,50569668,50569421,50569081	Gene ID= ENSG00000254413.8 TPM= 5.84 Transcript Type= NA
chr22	50578966	50582997	50578966	50582997	-	transcript3879.chr22.nic@CHKB-CPT1B	transcript3879.chr22.nic	protein_coding	50580565,50580190,50579974,50579727,50579426,50578966	50582997,50580416,50580082,50579830,50579507,50579255	Gene ID= ENSG00000254413.8 TPM= 11.09 Transcript Type= NA
chr22	50578949	50582999	50578949	50582999	-	ENST00000406938.2@CHKB	ENST00000406938.2	protein_coding	50582558,50582249,50581749,50581420,50580565,50580358,50580190,50579974,50579727,50579426,50578949	50582999,50582357,50581862,50581553,50580660,50580416,50580271,50580082,50579830,50579507,50579255	Gene ID= ENSG00000100288.19 TPM= 19.55 Transcript Type= protein_coding
chr22	50578966	50582989	50578966	50582989	-	transcript3851.chr22.nic@CHKB	transcript3851.chr22.nic	protein_coding	50582249,50581749,50581420,50580565,50580358,50580190,50579974,50579727,50579426,50578966	50582989,50581862,50581553,50580660,50580416,50580271,50580082,50579802,50579507,50579255	Gene ID= ENSG00000100288.19 TPM= 8.27 Transcript Type= NA
chr22	50578966	50583002	50578966	50583002	-	transcript3861.chr22.nic@CHKB	transcript3861.chr22.nic	protein_coding	50581749,50581420,50580565,50580358,50580190,50579974,50579727,50579426,50578966	50583002,50581553,50580660,50580416,50580271,50580082,50579802,50579507,50579255	Gene ID= ENSG00000100288.19 TPM= 10.77 Transcript Type= NA
chr22	50578966	50582989	50578966	50582989	-	transcript3865.chr22.nic@CHKB	transcript3865.chr22.nic	protein_coding	50582249,50581749,50581420,50580565,50580190,50579974,50579727,50579426,50578966	50582989,50581862,50581553,50580660,50580416,50580082,50579830,50579507,50579255	Gene ID= ENSG00000100288.19 TPM= 8.27 Transcript Type= NA
chr22	50578966	50582981	50578966	50582981	-	transcript3869.chr22.nic@CHKB	transcript3869.chr22.nic	protein_coding	50581420,50580565,50580358,50580190,50579974,50579727,50579426,50578966	50582981,50580660,50580416,50580271,50580082,50579830,50579507,50579255	Gene ID= ENSG00000100288.19 TPM= 5.16 Transcript Type= NA
chr22	50578959	50582854	50578959	50582854	-	ENST00000492582.5@CHKB	ENST00000492582.5	protein_coding	50581749,50581420,50580565,50580358,50580190,50579974,50579727,50579426,50578959	50582854,50581553,50580660,50580416,50580271,50580082,50579830,50579507,50579255	Gene ID= ENSG00000100288.19 TPM= 39.8 Transcript Type= retained_intron
chr22	50578966	50582820	50578966	50582820	-	ENST00000479003.5@CHKB	ENST00000479003.5	protein_coding	50581749,50581420,50580565,50580190,50579974,50579727,50579426,50578966	50582820,50581553,50580660,50580416,50580082,50579830,50579507,50579255	Gene ID= ENSG00000100288.19 TPM= 21.27 Transcript Type= retained_intron
chr22	50578963	50582845	50578963	50582845	-	ENST00000481673.5@CHKB	ENST00000481673.5	protein_coding	50582558,50581749,50581420,50580565,50580358,50580190,50579974,50579727,50579426,50578963	50582845,50582357,50581553,50580660,50580416,50580271,50580082,50579830,50579507,50579255	Gene ID= ENSG00000100288.19 TPM= 8.1 Transcript Type= retained_intron
chr22	50583026	50583877	50583026	50583877	+	ENST00000380711.3@CHKB-AS1	ENST00000380711.3	antisense_RNA	50583026,50583598	50583323,50583877	Gene ID= ENSG00000205559.3 TPM= 1.17 Transcript Type= antisense_RNA
chr22	50600685	50611551	50600685	50611551	+	ENST00000329492.5@MAPK8IP2	ENST00000329492.5	protein_coding	50600685,50601789,50603223,50603626,50603841,50605368,50605562,50605825,50606658,50606921,50610212,50610707	50600883,50601894,50603498,50603719,50605064,50605443,50605734,50605934,50606765,50606991,50610310,50611551	Gene ID= ENSG00000008735.13 TPM= 8.76 Transcript Type= protein_coding
chr22	50603620	50611551	50603620	50611551	+	transcript3887.chr22.nic@MAPK8IP2	transcript3887.chr22.nic	protein_coding	50603620,50603841,50605368,50605562,50605825,50606658,50606921,50610212,50610707	50603719,50605064,50605443,50605734,50605934,50606765,50606991,50610310,50611551	Gene ID= ENSG00000008735.13 TPM= 6.42 Transcript Type= NA
chr22	50625018	50628170	50625018	50628170	-	ENST00000356098.9@ARSA	ENST00000356098.9	protein_coding	50627946,50627556,50627166,50626834,50626591,50626154,50625936,50625579,50625018	50628170,50627792,50627406,50627052,50626760,50626278,50626063,50625681,50625464	Gene ID= ENSG00000100299.17 TPM= 31.85 Transcript Type= protein_coding
chr22	50625028	50628155	50625028	50628155	-	ENST00000395621.7@ARSA	ENST00000395621.7	protein_coding	50627898,50627556,50627166,50626834,50626591,50626154,50625936,50625579,50625028	50628155,50627792,50627406,50627052,50626760,50626278,50626063,50625681,50625464	Gene ID= ENSG00000100299.17 TPM= 14.34 Transcript Type= protein_coding
chr22	50625029	50628173	50625029	50628173	-	ENST00000453344.6@ARSA	ENST00000453344.6	protein_coding	50627946,50627166,50626834,50626591,50626154,50625936,50625579,50625029	50628173,50627406,50627052,50626760,50626278,50626063,50625681,50625464	Gene ID= ENSG00000100299.17 TPM= 3.93 Transcript Type= protein_coding
chr22	50625018	50628172	50625018	50628172	-	ENST00000216124.9@ARSA	ENST00000216124.9	protein_coding	50627556,50627166,50626834,50626591,50626154,50625936,50625579,50625018	50628172,50627406,50627052,50626760,50626278,50626063,50625681,50625464	Gene ID= ENSG00000100299.17 TPM= 36.92 Transcript Type= protein_coding
chr22	50625028	50628069	50625028	50628069	-	transcript3899.chr22.nnic@ARSA	transcript3899.chr22.nnic	protein_coding	50627946,50627556,50627166,50626591,50626154,50625936,50625579,50625028	50628069,50627792,50627406,50626760,50626278,50626063,50625681,50625464	Gene ID= ENSG00000100299.17 TPM= 4.38 Transcript Type= NA
chr22	50625028	50628169	50625028	50628169	-	transcript3901.chr22.nic@ARSA	transcript3901.chr22.nic	protein_coding	50627556,50626834,50626591,50626154,50625936,50625579,50625028	50628169,50627406,50626760,50626278,50626063,50625681,50625464	Gene ID= ENSG00000100299.17 TPM= 14.3 Transcript Type= NA
chr22	50625028	50628169	50625028	50628169	-	transcript3904.chr22.nic@ARSA	transcript3904.chr22.nic	protein_coding	50627556,50626591,50626154,50625936,50625579,50625028	50628169,50627406,50626278,50626063,50625681,50625464	Gene ID= ENSG00000100299.17 TPM= 7.1 Transcript Type= NA
chr22	50625033	50628159	50625033	50628159	-	ENST00000395619.3@ARSA	ENST00000395619.3	protein_coding	50627991,50627556,50627166,50626834,50626591,50626154,50625936,50625579,50625033	50628159,50627792,50627406,50627052,50626760,50626278,50626063,50625681,50625464	Gene ID= ENSG00000100299.17 TPM= 8.61 Transcript Type= protein_coding
chr22	50720680	50733212	50720680	50733212	+	transcript3908.chr22.nnic@SHANK3	transcript3908.chr22.nnic	protein_coding	50720680,50730947	50722437,50733212	Gene ID= ENSG00000251322.7 TPM= 117.93 Transcript Type= NA
chr22	50674642	50733210	50674642	50733210	+	ENST00000262795.5@SHANK3	ENST00000262795.5	protein_coding	50674642,50675048,50676622,50678585,50678769,50679019,50679312,50683340,50684585,50694775,50695928,50696904,50697244,50697565,50698690,50703860,50704166,50704738,50704964,50706072,50711615,50714917,50715669,50720184,50730721	50674704,50675251,50676693,50678693,50678920,50679186,50679428,50683417,50684651,50695048,50695932,50696914,50697267,50697715,50698803,50703935,50704248,50704862,50705096,50706152,50711638,50715047,50715753,50722437,50733210	Gene ID= ENSG00000251322.7 TPM= 35.03 Transcript Type= protein_coding
chr22	50721007	50724038	50721007	50724038	+	transcript3911.chr22.nnic@SHANK3	transcript3911.chr22.nnic	protein_coding	50721007,50723398	50722437,50724038	Gene ID= ENSG00000251322.7 TPM= 3.5 Transcript Type= NA
chr22	50721033	50733212	50721033	50733212	+	transcript3912.chr22.nnic@SHANK3	transcript3912.chr22.nnic	protein_coding	50721033,50733028	50722437,50733212	Gene ID= ENSG00000251322.7 TPM= 3.5 Transcript Type= NA
chr22	50783797	50789353	50783797	50789353	+	ENST00000494075.5@RPL23AP82	ENST00000494075.5	transcribed_unprocessed_pseudogene	50783797,50785173,50788750,50788892	50784021,50785293,50788798,50789353	Gene ID= ENSG00000184319.15 TPM= 1.17 Transcript Type= processed_transcript
chr22	50783757	50799434	50783757	50799434	+	ENST00000462238.5@RPL23AP82	ENST00000462238.5	transcribed_unprocessed_pseudogene	50783757,50785173,50798655	50783864,50785293,50799434	Gene ID= ENSG00000184319.15 TPM= 2.34 Transcript Type= processed_transcript
chr22	50783812	50789172	50783812	50789172	+	ENST00000423888.5@RPL23AP82	ENST00000423888.5	transcribed_unprocessed_pseudogene	50783812,50785173,50788750,50788895	50784021,50785293,50788798,50789172	Gene ID= ENSG00000184319.15 TPM= 1.17 Transcript Type= processed_transcript
chr22	50767506	50783663	50767506	50783663	-	ENST00000395595.7@RABL2B	ENST00000395595.7	protein_coding	50783501,50783039,50782188,50777952,50776670,50775772,50769905,50769455,50769041,50767506	50783663,50783286,50782351,50777981,50776749,50775851,50770016,50769552,50769124,50768874	Gene ID= ENSG00000079974.17 TPM= 4.34 Transcript Type= protein_coding
chr22	50767509	50783651	50767509	50783651	-	transcript3923.chr22.nic@RABL2B	transcript3923.chr22.nic	protein_coding	50783501,50782891,50782188,50777952,50776670,50775772,50769905,50769455,50769041,50767509	50783651,50783045,50782351,50777981,50776749,50775851,50770016,50769552,50769124,50768874	Gene ID= ENSG00000079974.17 TPM= 4.34 Transcript Type= NA
chr22	50767509	50783635	50767509	50783635	-	transcript3925.chr22.nic@RABL2B	transcript3925.chr22.nic	protein_coding	50783039,50782188,50777952,50776670,50775772,50769905,50769425,50769041,50767509	50783635,50782351,50777981,50776749,50775851,50770016,50769552,50769124,50768874	Gene ID= ENSG00000079974.17 TPM= 3.18 Transcript Type= NA
chr22	50767506	50783659	50767506	50783659	-	ENST00000395598.7@RABL2B	ENST00000395598.7	protein_coding	50783501,50782188,50777952,50776670,50775772,50769905,50769455,50769041,50767506	50783659,50782347,50777981,50776749,50775851,50770016,50769549,50769124,50768874	Gene ID= ENSG00000079974.17 TPM= 4.34 Transcript Type= protein_coding
chr22	50767509	50783654	50767509	50783654	-	transcript3934.chr22.nic@RABL2B	transcript3934.chr22.nic	protein_coding	50783501,50782188,50777952,50776670,50775772,50769455,50769041,50767509	50783654,50782347,50777981,50776749,50775851,50769552,50769124,50768874	Gene ID= ENSG00000079974.17 TPM= 3.18 Transcript Type= NA
chr22	50767506	50783662	50767506	50783662	-	ENST00000395591.5@RABL2B	ENST00000395591.5	protein_coding	50783501,50782188,50777952,50776670,50769455,50769041,50767506	50783662,50782351,50777981,50776749,50769552,50769124,50768874	Gene ID= ENSG00000079974.17 TPM= 2.01 Transcript Type= protein_coding
chr22	50767509	50783651	50767509	50783651	-	transcript3936.chr22.nic@RABL2B	transcript3936.chr22.nic	protein_coding	50782188,50777952,50776670,50775772,50769455,50769041,50767509	50783651,50777981,50776749,50775851,50770016,50769124,50768874	Gene ID= ENSG00000079974.17 TPM= 4.67 Transcript Type= NA
chr22	50767506	50783642	50767506	50783642	-	ENST00000395593.7@RABL2B	ENST00000395593.7	protein_coding	50783501,50782891,50782188,50777952,50776670,50775772,50769905,50769425,50769041,50767506	50783642,50783045,50782351,50777981,50776749,50775851,50770016,50769549,50769124,50768874	Gene ID= ENSG00000079974.17 TPM= 4.34 Transcript Type= protein_coding
chr22	50767504	50783621	50767504	50783621	-	ENST00000354869.7@RABL2B	ENST00000354869.7	protein_coding	50783501,50782188,50777952,50776670,50775772,50769905,50769455,50769041,50767504	50783621,50782351,50777981,50776749,50775851,50770016,50769552,50769124,50768874	Gene ID= ENSG00000079974.17 TPM= 6.68 Transcript Type= protein_coding
chr22	50767530	50783638	50767530	50783638	-	ENST00000436958.5@RABL2B	ENST00000436958.5	protein_coding	50783501,50782188,50777952,50776670,50775772,50769425,50769041,50767530	50783638,50782351,50777981,50776749,50775851,50769552,50769124,50768874	Gene ID= ENSG00000079974.17 TPM= 2.59 Transcript Type= nonsense_mediated_decay
chrM	1	575	1	575	+	transcript169.chrM.nnic@NA	transcript169.chrM.nnic	NA	1	575	Gene ID= novel_gene_chrM_170 TPM= 53.71 Transcript Type= NA
chrM	648	1601	648	1601	+	ENST00000389680.2@MT-RNR1	ENST00000389680.2	Mt_rRNA	648	1601	Gene ID= ENSG00000211459.2 TPM= 75.89 Transcript Type= Mt_rRNA
chrM	1671	3229	1671	3229	+	ENST00000387347.2@MT-RNR2	ENST00000387347.2	Mt_rRNA	1671	3229	Gene ID= ENSG00000210082.2 TPM= 430.84 Transcript Type= Mt_rRNA
chrM	3307	4262	3307	4262	+	ENST00000361390.2@MT-ND1	ENST00000361390.2	protein_coding	3307	4262	Gene ID= ENSG00000198888.2 TPM= 161.13 Transcript Type= protein_coding
chrM	4470	5511	4470	5511	+	ENST00000361453.3@MT-ND2	ENST00000361453.3	protein_coding	4470	5511	Gene ID= ENSG00000198763.3 TPM= 45.54 Transcript Type= protein_coding
chrM	5669	5899	5669	5899	+	transcript229.chrM.nnic@NA	transcript229.chrM.nnic	NA	5669	5899	Gene ID= novel_gene_chrM_230 TPM= 7.01 Transcript Type= NA
chrM	5904	7445	5904	7445	+	ENST00000361624.2@MT-CO1	ENST00000361624.2	protein_coding	5904	7445	Gene ID= ENSG00000198804.2 TPM= 36.2 Transcript Type= protein_coding
chrM	7510	12105	7510	12105	-	transcript251.chrM.nnic@NA	transcript251.chrM.nnic	NA	7510	12105	Gene ID= novel_gene_chrM_252 TPM= 57.21 Transcript Type= NA
chrM	7586	8269	7586	8269	+	ENST00000361739.1@MT-CO2	ENST00000361739.1	protein_coding	7586	8269	Gene ID= ENSG00000198712.1 TPM= 84.07 Transcript Type= protein_coding
chrM	8527	9207	8527	9207	+	ENST00000361899.2@MT-ATP6	ENST00000361899.2	protein_coding	8527	9207	Gene ID= ENSG00000198899.2 TPM= 46.7 Transcript Type= protein_coding
chrM	9207	9990	9207	9990	+	ENST00000362079.2@MT-CO3	ENST00000362079.2	protein_coding	9207	9990	Gene ID= ENSG00000198938.2 TPM= 310.58 Transcript Type= protein_coding
chrM	10059	10404	10059	10404	+	ENST00000361227.2@MT-ND3	ENST00000361227.2	protein_coding	10059	10404	Gene ID= ENSG00000198840.2 TPM= 23.35 Transcript Type= protein_coding
chrM	10760	12137	10760	12137	+	ENST00000361381.2@MT-ND4	ENST00000361381.2	protein_coding	10760	12137	Gene ID= ENSG00000198886.2 TPM= 91.07 Transcript Type= protein_coding
chrM	12337	14148	12337	14148	+	ENST00000361567.2@MT-ND5	ENST00000361567.2	protein_coding	12337	14148	Gene ID= ENSG00000198786.2 TPM= 28.02 Transcript Type= protein_coding
chrM	12773	15887	12773	15887	+	transcript227.chrM.nnic@NA	transcript227.chrM.nnic	NA	12773	15887	Gene ID= novel_gene_chrM_228 TPM= 24.52 Transcript Type= NA
chrM	14747	15887	14747	15887	+	ENST00000361789.2@MT-CYB	ENST00000361789.2	protein_coding	14747	15887	Gene ID= ENSG00000198727.2 TPM= 93.41 Transcript Type= protein_coding
chrX	304750	318819	304750	318819	-	ENST00000326153.9@GTPBP6	ENST00000326153.9	protein_coding	318439,316914,315229,314890,314150,312766,311419,307732,307360,304750	318819,317051,315299,315020,314217,312924,311627,307880,307512,305197	Gene ID= ENSG00000178605.13 TPM= 81.73 Transcript Type= protein_coding
chrX	1268800	1309935	1268800	1309935	+	ENST00000417535.7@CSF2RA	ENST00000417535.7	protein_coding	1268800,1274755,1282678,1285778,1288519,1288759,1290337,1294328,1295427,1300491,1303261,1303923,1305446,1309402	1268879,1274842,1282779,1285920,1288642,1288888,1290509,1294461,1295456,1300626,1303362,1304019,1305527,1309935	Gene ID= ENSG00000198223.16 TPM= 1.95 Transcript Type= protein_coding
chrX	1268808	1310381	1268808	1310381	+	ENST00000381524.8@CSF2RA	ENST00000381524.8	protein_coding	1268808,1274755,1282678,1285778,1288519,1288759,1290337,1294328,1295427,1300491,1303923,1305446,1309402	1268879,1274842,1282779,1285920,1288642,1288888,1290509,1294461,1295456,1300626,1304019,1305527,1310381	Gene ID= ENSG00000198223.16 TPM= 11.29 Transcript Type= protein_coding
chrX	1268800	1309922	1268800	1309922	+	ENST00000381529.8@CSF2RA	ENST00000381529.8	protein_coding	1268800,1274755,1282678,1285778,1288519,1288759,1290337,1294328,1295427,1300491,1303923,1305446,1309402	1268879,1274818,1282779,1285920,1288642,1288888,1290509,1294461,1295456,1300626,1304019,1305527,1309922	Gene ID= ENSG00000198223.16 TPM= 13.63 Transcript Type= protein_coding
chrX	1336616	1382685	1336616	1382685	+	ENST00000331035.9@IL3RA	ENST00000331035.9	protein_coding	1336616,1341728,1345316,1348431,1352100,1352322,1356221,1358861,1365138,1378659,1381023,1382391	1336926,1341829,1345434,1348545,1352232,1352506,1356336,1358887,1365252,1378764,1381104,1382685	Gene ID= ENSG00000185291.11 TPM= 68.89 Transcript Type= protein_coding
chrX	1386152	1392724	1386152	1392724	-	ENST00000381401.10@SLC25A6	ENST00000381401.10	protein_coding	1391899,1389241,1387279,1386152	1392724,1389727,1387419,1386759	Gene ID= ENSG00000169100.13 TPM= 740.25 Transcript Type= protein_coding
chrX	1403141	1452873	1403141	1452873	-	ENST00000381317.8@ASMTL	ENST00000381317.8	protein_coding	1452748,1442186,1439097,1435694,1435022,1432269,1427734,1425525,1421658,1418982,1417973,1412732,1403141	1452873,1442317,1439144,1435758,1435083,1432377,1428121,1425687,1421842,1419114,1418116,1412854,1403489	Gene ID= ENSG00000169093.15 TPM= 15.18 Transcript Type= protein_coding
chrX	1591593	1602514	1591593	1602514	+	ENST00000313871.8@AKAP17A	ENST00000313871.8	protein_coding	1591593,1593444,1595384,1599192,1600659	1591769,1594224,1595532,1599432,1602514	Gene ID= ENSG00000197976.11 TPM= 58.38 Transcript Type= protein_coding
chrX	1591623	1602502	1591623	1602502	+	ENST00000474361.6@AKAP17A	ENST00000474361.6	protein_coding	1591623,1593444,1595384,1599192,1600138,1600659	1591769,1594224,1595532,1599432,1600207,1602502	Gene ID= ENSG00000197976.11 TPM= 29.19 Transcript Type= nonsense_mediated_decay
chrX	2219516	2500978	2219516	2500978	-	ENST00000334651.10@DHRSX	ENST00000334651.10	protein_coding	2500817,2425197,2408745,2291502,2266740,2243023,2219516	2500978,2425304,2408813,2291603,2266947,2243230,2221229	Gene ID= ENSG00000169084.13 TPM= 23.35 Transcript Type= protein_coding
chrX	2691313	2741290	2691313	2741290	+	ENST00000624481.4@CD99	ENST00000624481.4	protein_coding	2691313,2714422,2717605,2719661,2720356,2722627,2723314,2726260,2738203,2740779	2691427,2714454,2717652,2719705,2720424,2722674,2723364,2726373,2738256,2741290	Gene ID= ENSG00000002586.18 TPM= 21.02 Transcript Type= protein_coding
chrX	2934632	2964453	2934632	2964453	-	ENST00000545496.5@ARSE	ENST00000545496.5	protein_coding	2964224,2960378,2959603,2958274,2955416,2953143,2949304,2945998,2943065,2938095,2936742,2934632	2964453,2960420,2959888,2958435,2955537,2953265,2949727,2946134,2943199,2938257,2936863,2935190	Gene ID= ENSG00000157399.14 TPM= 1.17 Transcript Type= protein_coding
chrX	2934816	2964288	2934816	2964288	-	transcript35.chrX.nic@ARSE	transcript35.chrX.nic	protein_coding	2964224,2960378,2958274,2955416,2953143,2949304,2945998,2943065,2938095,2936742,2934816	2964288,2960468,2958435,2955537,2953265,2949727,2946134,2943199,2938257,2936863,2935190	Gene ID= ENSG00000157399.14 TPM= 2.34 Transcript Type= NA
chrX	2934816	2964270	2934816	2964270	-	ENST00000381134.7@ARSE	ENST00000381134.7	protein_coding	2964224,2960378,2958274,2955416,2953143,2949304,2945998,2943065,2938095,2936742,2934816	2964270,2960420,2958435,2955537,2953265,2949727,2946134,2943199,2938257,2936863,2935190	Gene ID= ENSG00000157399.14 TPM= 10.51 Transcript Type= protein_coding
chrX	3609872	3713647	3609872	3713647	-	transcript40.chrX.nic@PRKX	transcript40.chrX.nic	protein_coding	3713088,3674598,3655149,3641852,3626419,3621259,3615815,3612177,3609872	3713647,3674766,3655412,3641971,3626514,3621316,3615892,3612325,3611334	Gene ID= ENSG00000183943.5 TPM= 7.01 Transcript Type= NA
chrX	3604370	3713608	3604370	3713608	-	ENST00000262848.5@PRKX	ENST00000262848.5	protein_coding	3713088,3674598,3655149,3641852,3626419,3621259,3615815,3612177,3604370	3713608,3674766,3655412,3641971,3626514,3621316,3615892,3612325,3608945	Gene ID= ENSG00000183943.5 TPM= 7.01 Transcript Type= protein_coding
chrX	3817535	3843933	3817535	3843933	-	transcript43.chrX.nnic@BX890604.1	transcript43.chrX.nnic	lincRNA	3843341,3828506,3818442,3817535	3843933,3829392,3818500,3817778	Gene ID= ENSG00000205664.10 TPM= 3.5 Transcript Type= NA
chrX	3817528	3843933	3817528	3843933	-	transcript45.chrX.nic@BX890604.1	transcript45.chrX.nic	lincRNA	3843341,3828506,3817528	3843933,3829392,3817778	Gene ID= ENSG00000205664.10 TPM= 4.67 Transcript Type= NA
chrX	7048920	7148190	7048920	7148190	-	ENST00000381077.9@PUDP	ENST00000381077.9	protein_coding	7148053,7105620,7077220,7048920	7148190,7105838,7077449,7050472	Gene ID= ENSG00000130021.13 TPM= 21.02 Transcript Type= protein_coding
chrX	7147696	7353066	7147696	7353066	+	transcript54.chrX.nnic@STS	transcript54.chrX.nnic	protein_coding	7147696,7190880,7253196,7257242,7257466,7259349,7275951,7305046,7325339,7333986,7349888	7148083,7191008,7253336,7257363,7257588,7259772,7276087,7305183,7325498,7334107,7353066	Gene ID= ENSG00000101846.6 TPM= 15.18 Transcript Type= NA
chrX	7147696	7453772	7147696	7453772	+	transcript55.chrX.nnic@STS	transcript55.chrX.nnic	protein_coding	7147696,7190880,7253196,7257242,7257466,7259349,7275951,7305046,7325339,7333986,7452386	7148083,7191008,7253336,7257363,7257588,7259772,7276087,7305183,7325498,7334107,7453772	Gene ID= ENSG00000101846.6 TPM= 2.34 Transcript Type= NA
chrX	7898247	7927443	7898247	7927443	-	ENST00000381042.8@PNPLA4	ENST00000381042.8	protein_coding	7927286,7925940,7922004,7921713,7912028,7901989,7898247	7927443,7926132,7922098,7921848,7912093,7902141,7900817	Gene ID= ENSG00000006757.11 TPM= 3.5 Transcript Type= protein_coding
chrX	7898763	7927739	7898763	7927739	-	ENST00000444736.5@PNPLA4	ENST00000444736.5	protein_coding	7927686,7925940,7922004,7921713,7912028,7901989,7898763	7927739,7926132,7922098,7921848,7912093,7902141,7900817	Gene ID= ENSG00000006757.11 TPM= 1.17 Transcript Type= protein_coding
chrX	8528874	8732186	8528874	8732186	-	ENST00000262648.7@ANOS1	ENST00000262648.7	protein_coding	8731830,8699698,8623608,8597034,8587794,8585267,8570499,8568232,8553952,8539664,8536771,8535591,8534319,8528874	8732186,8699745,8623670,8597256,8587978,8585396,8570704,8568376,8554098,8539758,8536942,8535811,8534460,8533053	Gene ID= ENSG00000011201.11 TPM= 105.08 Transcript Type= protein_coding
chrX	8565806	8732188	8565806	8732188	-	transcript68.chrX.nic@ANOS1	transcript68.chrX.nic	protein_coding	8731830,8699698,8623608,8597034,8587794,8585267,8570499,8568232,8565806	8732188,8699745,8623670,8597256,8587978,8585396,8570704,8568376,8566212	Gene ID= ENSG00000011201.11 TPM= 18.68 Transcript Type= NA
chrX	9465008	9719743	9465008	9719743	+	ENST00000217964.11@TBL1X	ENST00000217964.11	protein_coding	9465008,9501780,9640273,9653545,9654215,9684043,9688017,9691579,9692113,9693149,9693322,9697369,9704993,9709248,9709633,9711611,9714902,9716220	9465447,9501849,9640360,9653689,9654322,9684188,9688275,9691711,9692254,9693212,9693419,9697429,9705114,9709322,9709760,9711776,9715003,9719743	Gene ID= ENSG00000101849.15 TPM= 6.42 Transcript Type= protein_coding
chrX	9465266	9719740	9465266	9719740	+	transcript79.chrX.nnic@TBL1X	transcript79.chrX.nnic	protein_coding	9465266,9501780,9640273,9654215,9688017,9691579,9692113,9693149,9693322,9697369,9704993,9709248,9709633,9711611,9714902,9716220	9465447,9501849,9640360,9654322,9688275,9691711,9692254,9693212,9693419,9697429,9705114,9709322,9709760,9711776,9715003,9719740	Gene ID= ENSG00000101849.15 TPM= 8.76 Transcript Type= NA
chrX	9786456	9949443	9786456	9949443	+	ENST00000380913.7@SHROOM2	ENST00000380913.7	protein_coding	9786456,9873652,9890977,9894358,9898190,9932175,9937134,9939195,9944641,9946671	9786710,9873803,9891108,9896698,9898290,9932870,9937685,9939366,9944913,9949443	Gene ID= ENSG00000146950.12 TPM= 16.35 Transcript Type= protein_coding
chrX	10015225	10141634	10015225	10141634	+	transcript89.chrX.nnic@WWC3	transcript89.chrX.nnic	protein_coding	10015225,10063445,10067287,10078799,10079725,10090771,10094132,10098506,10109778,10116418,10117124,10122619,10124265,10125024,10126114,10127988,10128557,10129956,10134432,10136633,10138709,10139413,10141199	10015858,10063554,10067490,10078875,10079804,10090900,10094281,10098579,10110020,10116507,10117689,10122739,10124339,10125110,10126306,10128161,10128708,10130121,10134596,10136725,10138936,10139540,10141634	Gene ID= ENSG00000047644.18 TPM= 14.59 Transcript Type= NA
chrX	10015562	10144478	10015562	10144478	+	ENST00000380861.8@WWC3	ENST00000380861.8	protein_coding	10015562,10063445,10067287,10078799,10079725,10090771,10094132,10098506,10109778,10116418,10117124,10122619,10124265,10125024,10126114,10127988,10128557,10129956,10134432,10136633,10138709,10139413,10141435	10015858,10063554,10067490,10078875,10079804,10090900,10094281,10098579,10110020,10116507,10117689,10122739,10124339,10125110,10126306,10128161,10128708,10130121,10134596,10136725,10138936,10139540,10144478	Gene ID= ENSG00000047644.18 TPM= 44.37 Transcript Type= protein_coding
chrX	10015255	10016857	10015255	10016857	+	transcript102.chrX.nnic@NA	transcript102.chrX.nnic	NA	10015255	10016857	Gene ID= novel_gene_chrX_103 TPM= 3.5 Transcript Type= NA
chrX	10445556	10576955	10445556	10576955	-	ENST00000380779.5@MID1	ENST00000380779.5	protein_coding	10576784,10566888,10523092,10495584,10482480,10474623,10469697,10459646,10454870,10445556	10576955,10567603,10523187,10495691,10482628,10474750,10469840,10459807,10455077,10449716	Gene ID= ENSG00000101871.14 TPM= 3.5 Transcript Type= protein_coding
chrX	10445310	10620634	10445310	10620634	-	ENST00000317552.8@MID1	ENST00000317552.8	protein_coding	10620290,10566888,10523092,10495584,10482480,10474623,10469697,10459646,10454870,10445310	10620634,10567603,10523187,10495691,10482628,10474750,10469840,10459807,10455077,10449716	Gene ID= ENSG00000101871.14 TPM= 11.68 Transcript Type= protein_coding
chrX	10448108	10620585	10448108	10620585	-	transcript116.chrX.nic@MID1	transcript116.chrX.nic	protein_coding	10620290,10567002,10523092,10495584,10482480,10474623,10469697,10459646,10454870,10448108	10620585,10567603,10523187,10495691,10482628,10474750,10469840,10459807,10455077,10449716	Gene ID= ENSG00000101871.14 TPM= 2.34 Transcript Type= NA
chrX	11111301	11123078	11111301	11123078	+	ENST00000321143.8@HCCS	ENST00000321143.8	protein_coding	11111301,11112019,11114835,11117267,11118501,11120907,11121612	11111460,11112160,11114986,11117415,11118620,11120993,11123078	Gene ID= ENSG00000004961.14 TPM= 2.34 Transcript Type= protein_coding
chrX	11111365	11121879	11111365	11121879	+	ENST00000380762.4@HCCS	ENST00000380762.4	protein_coding	11111365,11112019,11114835,11117267,11118501,11120907,11121612	11111518,11112160,11114986,11117415,11118620,11120993,11121879	Gene ID= ENSG00000004961.14 TPM= 5.84 Transcript Type= protein_coding
chrX	11137543	11427773	11137543	11427773	-	ENST00000380736.5@ARHGAP6	ENST00000380736.5	protein_coding	11427548,11254548,11196925,11188728,11186236,11182063,11179302,11178100,11169505,11156529,11143980,11142233,11137543	11427773,11254707,11196996,11188984,11186431,11182118,11179452,11178248,11169684,11156626,11144248,11142313,11139530	Gene ID= ENSG00000047648.21 TPM= 30.36 Transcript Type= protein_coding
chrX	11758159	11775753	11758159	11775753	+	ENST00000312196.8@MSL3	ENST00000312196.8	protein_coding	11758159,11759793,11760403,11760837,11761500,11762130,11762837,11763780,11765467,11768573,11772156,11772621,11774980	11758365,11759875,11760498,11760937,11761582,11762252,11762997,11763938,11765729,11768682,11772255,11772705,11775753	Gene ID= ENSG00000005302.17 TPM= 8.96 Transcript Type= protein_coding
chrX	11759639	11775751	11759639	11775751	+	transcript132.chrX.nic@MSL3	transcript132.chrX.nic	protein_coding	11759639,11759793,11760403,11760837,11761500,11762130,11762837,11763780,11765467,11768573,11772156,11772621,11774980	11759712,11759875,11760498,11760937,11761582,11762252,11762997,11763938,11765729,11768682,11772255,11772705,11775751	Gene ID= ENSG00000005302.17 TPM= 3.7 Transcript Type= NA
chrX	11759552	11775751	11759552	11775751	+	ENST00000380693.7@MSL3	ENST00000380693.7	protein_coding	11759552,11760403,11760837,11761500,11762130,11762837,11763780,11765467,11768573,11772156,11772621,11774980	11759875,11760498,11760937,11761582,11762252,11762997,11763938,11765729,11768682,11772255,11772705,11775751	Gene ID= ENSG00000005302.17 TPM= 8.37 Transcript Type= protein_coding
chrX	12867083	12890380	12867083	12890380	+	ENST00000380659.3@TLR7	ENST00000380659.3	protein_coding	12867083,12867481,12885512	12867123,12867581,12890380	Gene ID= ENSG00000196664.4 TPM= 1.17 Transcript Type= protein_coding
chrX	12906620	12923169	12906620	12923169	+	ENST00000218032.6@TLR8	ENST00000218032.6	protein_coding	12906620,12919044	12906709,12923169	Gene ID= ENSG00000101916.11 TPM= 4.67 Transcript Type= protein_coding
chrX	12911497	12913506	12911497	12913506	+	transcript149.chrX.nnic@NA	transcript149.chrX.nnic	NA	12911497	12913506	Gene ID= novel_gene_chrX_150 TPM= 2.34 Transcript Type= NA
chrX	12975108	12977227	12975108	12977227	+	ENST00000451311.6@TMSB4X	ENST00000451311.6	protein_coding	12975108,12976246,12976777	12975168,12976361,12977227	Gene ID= ENSG00000205542.10 TPM= 3120.98 Transcript Type= protein_coding
chrX	12975110	12977226	12975110	12977226	+	ENST00000380636.1@TMSB4X	ENST00000380636.1	protein_coding	12975110,12976777	12976361,12977226	Gene ID= ENSG00000205542.10 TPM= 45.54 Transcript Type= protein_coding
chrX	13266542	13303452	13266542	13303452	-	ENST00000443965.1@LINC02154	ENST00000443965.1	lincRNA	13303320,13266542	13303452,13267335	Gene ID= ENSG00000235385.1 TPM= 1.17 Transcript Type= lincRNA
chrX	13569605	13633574	13569605	13633574	+	ENST00000361306.5@EGFL6	ENST00000361306.5	protein_coding	13569605,13589556,13594836,13599975,13603317,13606379,13608324,13617730,13619163,13623824,13627011,13632985	13569935,13589668,13594928,13600094,13603436,13606513,13608446,13618053,13619243,13623925,13627276,13633574	Gene ID= ENSG00000198759.11 TPM= 36.2 Transcript Type= protein_coding
chrX	13569622	13633575	13569622	13633575	+	ENST00000380602.3@EGFL6	ENST00000380602.3	protein_coding	13569622,13589556,13594836,13599975,13603317,13606379,13608324,13617730,13619163,13623821,13627011,13632985	13569935,13589668,13594928,13600094,13603436,13606513,13608446,13618053,13619243,13623925,13627276,13633575	Gene ID= ENSG00000198759.11 TPM= 8.17 Transcript Type= protein_coding
chrX	13653120	13665294	13653120	13665294	+	transcript169.chrX.nnic@TCEANC	transcript169.chrX.nnic	protein_coding	13653120,13655289,13659652,13661031,13662501	13653188,13655373,13659768,13661122,13665294	Gene ID= ENSG00000176896.8 TPM= 2.34 Transcript Type= NA
chrX	13655295	13665409	13655295	13665409	+	ENST00000380600.1@TCEANC	ENST00000380600.1	protein_coding	13655295,13662501	13655373,13665409	Gene ID= ENSG00000176896.8 TPM= 1.17 Transcript Type= protein_coding
chrX	13712244	13734635	13712244	13734635	-	ENST00000359680.9@TRAPPC2	ENST00000359680.9	protein_coding	13734525,13719871,13716534,13716004,13712244	13734635,13719982,13716678,13716089,13714505	Gene ID= ENSG00000196459.13 TPM= 30.36 Transcript Type= protein_coding
chrX	13734743	13769224	13734743	13769224	+	transcript187.chrX.nic@OFD1	transcript187.chrX.nic	protein_coding	13734743,13735248,13736108,13736478,13738846,13739002,13744415,13746319,13746780,13749427,13751249,13752704,13755151,13756578,13757660,13758337,13760115,13761085,13762344,13763745,13767127,13768054,13768718,13769066	13735083,13735346,13736296,13736678,13738914,13739032,13744519,13746455,13746953,13749533,13751368,13753441,13755242,13756767,13757790,13758448,13760720,13761211,13762444,13763855,13767284,13768224,13768785,13769224	Gene ID= ENSG00000046651.14 TPM= 3.5 Transcript Type= NA
chrX	13734743	13769224	13734743	13769224	+	transcript188.chrX.nic@OFD1	transcript188.chrX.nic	protein_coding	13734743,13735248,13736108,13736478,13738846,13739002,13744415,13746319,13746780,13749427,13751249,13753368,13755151,13756578,13757660,13758337,13760115,13761085,13762344,13763745,13767127,13768054,13768718,13769066	13735083,13735346,13736296,13736678,13738914,13739032,13744519,13746455,13746953,13749533,13751368,13753441,13755242,13756767,13757790,13758448,13760720,13761211,13762444,13763855,13767284,13768224,13768785,13769224	Gene ID= ENSG00000046651.14 TPM= 2.34 Transcript Type= NA
chrX	13734807	13769224	13734807	13769224	+	transcript190.chrX.nic@OFD1	transcript190.chrX.nic	protein_coding	13734807,13735248,13736478,13738846,13739002,13740089,13744415,13746319,13746780,13749427,13751249,13752704,13755151,13756578,13757660,13758337,13760115,13761085,13762344,13767127,13768054,13768718,13769066	13735083,13735346,13736678,13738914,13739032,13740213,13744519,13746455,13746953,13749533,13751368,13753441,13755242,13756767,13757790,13758448,13760720,13761211,13762444,13767284,13768224,13768785,13769224	Gene ID= ENSG00000046651.14 TPM= 3.5 Transcript Type= NA
chrX	13734745	13769353	13734745	13769353	+	ENST00000340096.10@OFD1	ENST00000340096.10	protein_coding	13734745,13735248,13736478,13738846,13739002,13744415,13746319,13746780,13749427,13751249,13753368,13755151,13756578,13757660,13758337,13760115,13761085,13762344,13763745,13767127,13768054,13768718,13769066	13735083,13735346,13736678,13738914,13739032,13744519,13746455,13746953,13749533,13751368,13753441,13755242,13756767,13757790,13758448,13760720,13761211,13762444,13763855,13767284,13768224,13768785,13769353	Gene ID= ENSG00000046651.14 TPM= 1.17 Transcript Type= protein_coding
chrX	13734743	13740808	13734743	13740808	+	transcript217.chrX.nic@OFD1	transcript217.chrX.nic	protein_coding	13734743,13735248,13736478,13738846,13739002	13735083,13735346,13736678,13738914,13740808	Gene ID= ENSG00000046651.14 TPM= 2.34 Transcript Type= NA
chrX	13771031	13938639	13771031	13938639	-	transcript209.chrX.nic@GPM6B	transcript209.chrX.nic	protein_coding	13938507,13785622,13783365,13779818,13777352,13776238,13771031	13938639,13785808,13783521,13779989,13777425,13776303,13773030	Gene ID= ENSG00000046653.14 TPM= 3.5 Transcript Type= NA
chrX	13771456	13938638	13771456	13938638	-	ENST00000454189.6@GPM6B	ENST00000454189.6	protein_coding	13938507,13785622,13783365,13779818,13777352,13776238,13771456	13938638,13785808,13783521,13779989,13777425,13776303,13774624	Gene ID= ENSG00000046653.14 TPM= 2.34 Transcript Type= protein_coding
chrX	14006728	14029898	14006728	14029898	-	transcript223.chrX.nic@GEMIN8	transcript223.chrX.nic	protein_coding	14029777,14026140,14021464,14020078,14006728	14029898,14026221,14021511,14020534,14009169	Gene ID= ENSG00000046647.13 TPM= 4.67 Transcript Type= NA
chrX	14008673	14029916	14008673	14029916	-	transcript232.chrX.nic@GEMIN8	transcript232.chrX.nic	protein_coding	14026140,14021464,14020078,14008673	14029916,14021511,14020534,14009169	Gene ID= ENSG00000046647.13 TPM= 7.01 Transcript Type= NA
chrX	14008673	14029893	14008673	14029893	-	ENST00000398355.7@GEMIN8	ENST00000398355.7	protein_coding	14029777,14021464,14020078,14008673	14029893,14021511,14020534,14009169	Gene ID= ENSG00000046647.13 TPM= 4.67 Transcript Type= protein_coding
chrX	14873441	14922327	14873441	14922327	+	ENST00000380492.7@MOSPD2	ENST00000380492.7	protein_coding	14873441,14873689,14892723,14895308,14897084,14900575,14902966,14908860,14911237,14912249,14914503,14915668,14916197,14918680,14919672	14873537,14873758,14892878,14895394,14897238,14900635,14903004,14908984,14911413,14912361,14914599,14915764,14916326,14918782,14922327	Gene ID= ENSG00000130150.11 TPM= 25.69 Transcript Type= protein_coding
chrX	14873455	14921756	14873455	14921756	+	ENST00000482354.5@MOSPD2	ENST00000482354.5	protein_coding	14873455,14873689,14892723,14895308,14897084,14900575,14902966,14908860,14911237,14912249,14914503,14915668,14916197,14918680,14921380	14873537,14873758,14892878,14895394,14897238,14900635,14903004,14908984,14911413,14912361,14914599,14915764,14916326,14918782,14921756	Gene ID= ENSG00000130150.11 TPM= 1.17 Transcript Type= protein_coding
chrX	15243989	15270467	15243989	15270467	-	ENST00000546332.1@ASB9	ENST00000546332.1	protein_coding	15270119,15269781,15258866,15254737,15252254,15250430,15248683,15243989	15270467,15270009,15258945,15254844,15252404,15250564,15248935,15244630	Gene ID= ENSG00000102048.15 TPM= 1.17 Transcript Type= protein_coding
chrX	15243987	15270148	15243987	15270148	-	ENST00000380488.8@ASB9	ENST00000380488.8	protein_coding	15269781,15258866,15254737,15252254,15250430,15248744,15243987	15270148,15258945,15254844,15252404,15250564,15248935,15244630	Gene ID= ENSG00000102048.15 TPM= 1.17 Transcript Type= protein_coding
chrX	15243987	15270061	15243987	15270061	-	ENST00000380485.7@ASB9	ENST00000380485.7	protein_coding	15269781,15258866,15254737,15252254,15250430,15248683,15243987	15270061,15258945,15254844,15252404,15250564,15248935,15244630	Gene ID= ENSG00000102048.15 TPM= 2.34 Transcript Type= protein_coding
chrX	15319451	15335580	15319451	15335580	-	ENST00000333590.5@PIGA	ENST00000333590.5	protein_coding	15335501,15331216,15325914,15325020,15324665,15319451	15335580,15331992,15326046,15325152,15324871,15321772	Gene ID= ENSG00000165195.15 TPM= 2.34 Transcript Type= protein_coding
chrX	15319500	15335544	15319500	15335544	-	ENST00000638131.1@PIGA	ENST00000638131.1	protein_coding	15335501,15331820,15325914,15325020,15324665,15319500	15335544,15331992,15326046,15325152,15324871,15321772	Gene ID= ENSG00000165195.15 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chrX	15345591	15384376	15345591	15384376	-	ENST00000297904.3@VEGFD	ENST00000297904.3	protein_coding	15383857,15363109,15358003,15355150,15353068,15347164,15345591	15384376,15363319,15358193,15355298,15353168,15347359,15346259	Gene ID= ENSG00000165197.4 TPM= 126.1 Transcript Type= protein_coding
chrX	15384799	15493564	15384799	15493564	-	ENST00000380421.3@PIR	ENST00000380421.3	protein_coding	15493156,15491162,15479729,15459657,15455848,15425906,15407506,15397449,15390185,15384799	15493564,15491309,15479821,15459740,15456054,15425990,15407550,15397531,15390251,15385116	Gene ID= ENSG00000087842.10 TPM= 2.92 Transcript Type= protein_coding
chrX	15384799	15493341	15384799	15493341	-	ENST00000380420.9@PIR	ENST00000380420.9	protein_coding	15493190,15491162,15479729,15459657,15455848,15425906,15407506,15397449,15390185,15384799	15493341,15491309,15479821,15459740,15456054,15425990,15407550,15397531,15390251,15385116	Gene ID= ENSG00000087842.10 TPM= 27.44 Transcript Type= protein_coding
chrX	15500809	15556517	15500809	15556517	+	transcript270.chrX.nnic@BMX	transcript270.chrX.nnic	protein_coding	15500809,15508345,15509329,15511461,15516112,15517929,15522346,15525288,15526042,15529973,15531328,15534212,15536353,15537134,15541982,15543071,15546803,15549840,15556073	15500940,15508491,15509390,15511518,15516231,15517993,15522587,15525365,15526095,15530027,15531407,15534339,15536427,15537305,15542198,15543135,15546921,15549997,15556517	Gene ID= ENSG00000102010.14 TPM= 2.34 Transcript Type= NA
chrX	15500829	15556529	15500829	15556529	+	ENST00000348343.10@BMX	ENST00000348343.10	protein_coding	15500829,15508345,15509329,15511437,15516112,15517929,15522346,15525288,15526042,15529973,15531328,15534212,15536353,15537134,15541982,15543071,15546803,15549840,15556073	15500940,15508491,15509433,15511518,15516231,15517993,15522587,15525365,15526095,15530027,15531407,15534339,15536427,15537305,15542198,15543135,15546921,15549997,15556529	Gene ID= ENSG00000102010.14 TPM= 5.84 Transcript Type= protein_coding
chrX	15738270	15788409	15738270	15788409	+	ENST00000318636.7@CA5B	ENST00000318636.7	protein_coding	15738270,15749971,15764578,15772496,15774302,15775246,15776714,15782485	15738352,15750165,15764775,15772614,15774397,15775308,15776869,15788409	Gene ID= ENSG00000169239.12 TPM= 1.17 Transcript Type= protein_coding
chrX	15790472	15823260	15790472	15823260	+	ENST00000307771.7@ZRSR2	ENST00000307771.7	protein_coding	15790472,15790934,15799872,15803688,15804111,15808233,15809200,15815677,15818587,15820207,15822731	15790536,15791013,15799953,15803796,15804197,15808271,15809318,15815890,15818642,15820316,15823260	Gene ID= ENSG00000169249.12 TPM= 22.18 Transcript Type= protein_coding
chrX	15830059	15854847	15830059	15854847	-	transcript293.chrX.nic@AP1S2	transcript293.chrX.nic	protein_coding	15854688,15852346,15845903,15845379,15833444,15830059	15854847,15852524,15846011,15845516,15833524,15831568	Gene ID= ENSG00000182287.14 TPM= 4.67 Transcript Type= NA
chrX	15825806	15854931	15825806	15854931	-	ENST00000329235.6@AP1S2	ENST00000329235.6	protein_coding	15854688,15852346,15845903,15845379,15825806	15854931,15852524,15846011,15845516,15827372	Gene ID= ENSG00000182287.14 TPM= 29.19 Transcript Type= protein_coding
chrX	15830059	15854847	15830059	15854847	-	transcript297.chrX.nic@AP1S2	transcript297.chrX.nic	protein_coding	15854688,15852346,15845903,15845379,15830059	15854847,15852524,15846011,15845516,15831568	Gene ID= ENSG00000182287.14 TPM= 4.67 Transcript Type= NA
chrX	16719632	16765336	16719632	16765336	+	ENST00000380155.3@SYAP1	ENST00000380155.3	protein_coding	16719632,16735227,16736166,16741716,16743701,16754945,16756663,16757162,16760232	16719899,16735345,16736232,16741789,16743840,16755093,16756721,16757309,16765336	Gene ID= ENSG00000169895.5 TPM= 17.51 Transcript Type= protein_coding
chrX	16786427	16844519	16786427	16844519	+	ENST00000380122.9@TXLNG	ENST00000380122.9	protein_coding	16786427,16818574,16820164,16828094,16829576,16832623,16834283,16837593,16839821,16841428	16786589,16818877,16820255,16828264,16829770,16832742,16834357,16837685,16839916,16844519	Gene ID= ENSG00000086712.12 TPM= 16.35 Transcript Type= protein_coding
chrX	16821141	16823581	16821141	16823581	-	transcript333.chrX.nnic@NA	transcript333.chrX.nnic	NA	16822144,16821394,16821141	16823581,16821795,16821174	Gene ID= novel_gene_chrX_334 TPM= 2.34 Transcript Type= NA
chrX	16844341	16870414	16844341	16870414	-	ENST00000380087.6@RBBP7	ENST00000380087.6	protein_coding	16870038,16869076,16862955,16858676,16857594,16853682,16852749,16852551,16852046,16849244,16845828,16844341	16870414,16869220,16863100,16858849,16857709,16853842,16852875,16852628,16852122,16849301,16845938,16845103	Gene ID= ENSG00000102054.17 TPM= 3.5 Transcript Type= protein_coding
chrX	16844654	16869886	16844654	16869886	-	ENST00000380084.8@RBBP7	ENST00000380084.8	protein_coding	16869494,16869076,16862955,16858676,16857594,16853682,16852749,16852551,16852046,16849244,16845828,16844654	16869886,16869220,16863100,16858849,16857709,16853842,16852875,16852628,16852122,16849301,16845938,16845103	Gene ID= ENSG00000102054.17 TPM= 1.17 Transcript Type= protein_coding
chrX	16844650	16870408	16844650	16870408	-	transcript328.chrX.nic@RBBP7	transcript328.chrX.nic	protein_coding	16870038,16869076,16862955,16858676,16857594,16852551,16852046,16849244,16845828,16844650	16870408,16869220,16863100,16858849,16857709,16853842,16852122,16849301,16845938,16845103	Gene ID= ENSG00000102054.17 TPM= 3.5 Transcript Type= NA
chrX	16844650	16870338	16844650	16870338	-	transcript329.chrX.nic@RBBP7	transcript329.chrX.nic	protein_coding	16870038,16869076,16862955,16858676,16857594,16852046,16849244,16845828,16844650	16870338,16869220,16863100,16858849,16857709,16853842,16849301,16845938,16845103	Gene ID= ENSG00000102054.17 TPM= 4.67 Transcript Type= NA
chrX	16844690	16870361	16844690	16870361	-	ENST00000404022.5@RBBP7	ENST00000404022.5	protein_coding	16870038,16869076,16862955,16858676,16857594,16853682,16852749,16852551,16852046,16849244,16845828,16844690	16870361,16869220,16863100,16858822,16857709,16853842,16852875,16852628,16852122,16849301,16845938,16845103	Gene ID= ENSG00000102054.17 TPM= 93.41 Transcript Type= protein_coding
chrX	16967847	16970225	16967847	16970225	-	transcript344.chrX.nnic@NA	transcript344.chrX.nnic	NA	16967847	16970225	Gene ID= novel_gene_chrX_345 TPM= 2.34 Transcript Type= NA
chrX	17737449	17754988	17737449	17754988	+	ENST00000398080.5@SCML1	ENST00000398080.5	protein_coding	17737449,17746015,17749400,17749894,17751815,17753258	17737680,17746098,17749504,17750293,17751966,17754988	Gene ID= ENSG00000047634.14 TPM= 3.5 Transcript Type= protein_coding
chrX	17737468	17754985	17737468	17754985	+	ENST00000380045.7@SCML1	ENST00000380045.7	protein_coding	17737468,17746018,17749400,17749894,17751815,17753258	17737680,17746098,17749504,17750293,17751966,17754985	Gene ID= ENSG00000047634.14 TPM= 4.67 Transcript Type= protein_coding
chrX	17800051	17860931	17800051	17860931	-	transcript354.chrX.nnic@RAI2	transcript354.chrX.nnic	protein_coding	17860509,17837537,17800051	17860931,17837733,17802034	Gene ID= ENSG00000131831.17 TPM= 19.27 Transcript Type= NA
chrX	17800052	17860904	17800052	17860904	-	transcript356.chrX.nnic@RAI2	transcript356.chrX.nnic	protein_coding	17860509,17829127,17800052	17860904,17829269,17802034	Gene ID= ENSG00000131831.17 TPM= 8.76 Transcript Type= NA
chrX	17800049	17861140	17800049	17861140	-	transcript357.chrX.nnic@RAI2	transcript357.chrX.nnic	protein_coding	17860509,17800049	17861140,17802034	Gene ID= ENSG00000131831.17 TPM= 56.63 Transcript Type= NA
chrX	17800051	17861337	17800051	17861337	-	ENST00000451717.5@RAI2	ENST00000451717.5	protein_coding	17861098,17800051	17861337,17802034	Gene ID= ENSG00000131831.17 TPM= 11.09 Transcript Type= protein_coding
chrX	18239314	18354727	18239314	18354727	-	ENST00000251900.8@SCML2	ENST00000251900.8	protein_coding	18354592,18334050,18330587,18324907,18323859,18320332,18304972,18265585,18260171,18258044,18256848,18247769,18246577,18242439,18239314	18354727,18334095,18330655,18324977,18324093,18320420,18305215,18265802,18260291,18258247,18257030,18247882,18246828,18242590,18241379	Gene ID= ENSG00000102098.17 TPM= 1.17 Transcript Type= protein_coding
chrX	18425574	18619944	18425574	18619944	+	transcript362.chrX.nic@CDKL5	transcript362.chrX.nic	protein_coding	18425574,18506935,18510820,18564477,18575354,18579848,18581891,18584263,18587954,18595348,18598462,18603902,18608811,18609465,18613152,18619867	18425695,18507160,18510854,18564522,18575490,18579968,18581950,18584353,18588143,18595428,18598613,18604868,18608912,18609570,18613275,18619944	Gene ID= ENSG00000008086.11 TPM= 3.5 Transcript Type= NA
chrX	18631430	18635393	18631430	18635393	+	transcript363.chrX.nnic@NA	transcript363.chrX.nnic	NA	18631430	18635393	Gene ID= novel_gene_chrX_364 TPM= 5.84 Transcript Type= NA
chrX	18639910	18672109	18639910	18672109	-	ENST00000379984.3@RS1	ENST00000379984.3	protein_coding	18672017,18657640,18656653,18647191,18644430,18639910	18672109,18657665,18656758,18647332,18644625,18642156	Gene ID= ENSG00000102104.8 TPM= 1.17 Transcript Type= protein_coding
chrX	18892300	18984598	18892300	18984598	-	ENST00000379942.4@PHKA2	ENST00000379942.4	protein_coding	18983855,18954254,18952494,18951104,18948744,18945078,18943710,18941529,18939995,18938627,18936055,18931641,18929228,18926453,18925668,18924381,18924056,18920032,18918681,18910872,18908801,18907900,18907018,18906736,18906495,18905758,18901485,18900670,18899173,18897163,18895138,18894204,18892300	18984598,18954412,18952541,18951272,18948826,18945158,18943808,18941675,18940048,18938749,18936150,18931748,18929306,18926587,18925777,18924525,18924134,18920201,18918854,18910960,18908934,18908056,18907097,18906814,18906624,18905859,18901603,18900699,18899226,18897333,18895191,18894404,18893655	Gene ID= ENSG00000044446.11 TPM= 1.17 Transcript Type= protein_coding
chrX	19343893	19361705	19343893	19361705	+	ENST00000379806.9@PDHA1	ENST00000379806.9	protein_coding	19343893,19346510,19349312,19349937,19351281,19353082,19354491,19355349,19355686,19357652,19358916,19359489	19344094,19346623,19349371,19350110,19351407,19353173,19354583,19355504,19355757,19357719,19359024,19361705	Gene ID= ENSG00000131828.13 TPM= 9.4 Transcript Type= protein_coding
chrX	19343893	19361705	19343893	19361705	+	ENST00000545074.5@PDHA1	ENST00000545074.5	protein_coding	19343893,19349312,19349937,19351260,19353082,19354491,19355349,19355686,19357652,19358916,19359489	19344094,19349371,19350110,19351407,19353173,19354583,19355504,19355757,19357719,19359024,19361705	Gene ID= ENSG00000131828.13 TPM= 3.56 Transcript Type= protein_coding
chrX	19343893	19361705	19343893	19361705	+	ENST00000540249.5@PDHA1	ENST00000540249.5	protein_coding	19343893,19349312,19349937,19351281,19353082,19355349,19355686,19357652,19358916,19359489	19344094,19349371,19350110,19351407,19353173,19355504,19355757,19357719,19359024,19361705	Gene ID= ENSG00000131828.13 TPM= 2.1 Transcript Type= protein_coding
chrX	19351796	19359844	19351796	19359844	+	transcript394.chrX.nic@PDHA1	transcript394.chrX.nic	protein_coding	19351796,19355686,19357652,19358916,19359489	19355504,19355757,19357719,19359024,19359844	Gene ID= ENSG00000131828.13 TPM= 23.35 Transcript Type= NA
chrX	19343933	19361685	19343933	19361685	+	ENST00000422285.6@PDHA1	ENST00000422285.6	protein_coding	19343933,19349312,19349937,19351281,19353082,19354491,19355349,19355686,19357652,19358916,19359489	19344094,19349371,19350110,19351407,19353173,19354583,19355504,19355757,19357719,19359024,19361685	Gene ID= ENSG00000131828.13 TPM= 53.77 Transcript Type= protein_coding
chrX	19533975	19887601	19533975	19887601	-	ENST00000397821.7@SH3KBP1	ENST00000397821.7	protein_coding	19887307,19836125,19746318,19706881,19695612,19683823,19645400,19631864,19607938,19594949,19592067,19588643,19569103,19549974,19545922,19541925,19537717,19533975	19887601,19836282,19746441,19706984,19695741,19684028,19645475,19631958,19608045,19595000,19592147,19588802,19569188,19550083,19546050,19542193,19537780,19536458	Gene ID= ENSG00000147010.17 TPM= 84.65 Transcript Type= protein_coding
chrX	19829343	19831802	19829343	19831802	+	transcript411.chrX.nnic@NA	transcript411.chrX.nnic	NA	19829343	19831802	Gene ID= novel_gene_chrX_412 TPM= 3.5 Transcript Type= NA
chrX	19916258	19991060	19916258	19991060	-	transcript415.chrX.nnic@BCLAF3	transcript415.chrX.nnic	protein_coding	19990908,19970224,19966080,19965044,19955391,19953778,19952988,19950753,19937418,19935809,19929785,19916258	19991060,19970298,19966649,19965706,19955566,19953892,19953051,19950868,19937532,19935898,19929940,19917334	Gene ID= ENSG00000173681.16 TPM= 2.34 Transcript Type= NA
chrX	19916258	19991060	19916258	19991060	-	transcript416.chrX.nnic@BCLAF3	transcript416.chrX.nnic	protein_coding	19990908,19970224,19966080,19965044,19955391,19953778,19952988,19950753,19937505,19935809,19929785,19916258	19991060,19970298,19966649,19965706,19955566,19953892,19953051,19950868,19937532,19935898,19929940,19917334	Gene ID= ENSG00000173681.16 TPM= 2.34 Transcript Type= NA
chrX	20124518	20141844	20124518	20141844	-	ENST00000379607.9@EIF1AX	ENST00000379607.9	protein_coding	20141625,20138539,20135738,20133957,20132182,20130516,20124518	20141844,20138622,20135841,20134007,20132263,20130607,20128311	Gene ID= ENSG00000173674.10 TPM= 25.69 Transcript Type= protein_coding
chrX	20153617	20219090	20153617	20219090	-	transcript460.chrX.nic@RPS6KA3	transcript460.chrX.nic	protein_coding	20218800,20209288,20204022,20195065,20194189,20193487,20188497,20187828,20186296,20176996,20176434,20176250,20175164,20172746,20169402,20167589,20164899,20162964,20161644,20156109,20153617	20219090,20209404,20204103,20195145,20194268,20193593,20188534,20187970,20186366,20177084,20176498,20176352,20175288,20172871,20169491,20167747,20165060,20163040,20161761,20156249,20155520	Gene ID= ENSG00000177189.12 TPM= 6.42 Transcript Type= NA
chrX	21839636	21885424	21839636	21885424	+	ENST00000379484.9@MBTPS2	ENST00000379484.9	protein_coding	21839636,21843170,21845171,21851509,21853376,21868467,21869498,21878042,21878497,21880897,21882433	21839809,21843318,21845384,21851612,21853503,21868585,21869678,21878136,21878692,21880972,21885424	Gene ID= ENSG00000012174.11 TPM= 33.86 Transcript Type= protein_coding
chrX	21940573	21994835	21940573	21994835	+	ENST00000404933.6@SMS	ENST00000404933.6	protein_coding	21940573,21967196,21971897,21972507,21977061,21977960,21978877,21984304,21985144,21992597,21994312	21940873,21967316,21971990,21972571,21977236,21978114,21978966,21984418,21985223,21992712,21994835	Gene ID= ENSG00000102172.15 TPM= 82.9 Transcript Type= protein_coding
chrX	22032441	22251310	22032441	22251310	+	ENST00000379374.4@PHEX	ENST00000379374.4	protein_coding	22032441,22038469,22047050,22076388,22077476,22090429,22093983,22096955,22099006,22111467,22114458,22133523,22168312,22178273,22190444,22212904,22219036,22221613,22226443,22227507,22245333,22247851	22033123,22038537,22047211,22076474,22077702,22090497,22094099,22097038,22099151,22111560,22114586,22133624,22168389,22178376,22190502,22212958,22219103,22221743,22226508,22227611,22245409,22251310	Gene ID= ENSG00000102174.8 TPM= 1.17 Transcript Type= protein_coding
chrX	23667446	23686399	23667446	23686399	+	ENST00000379341.8@PRDX4	ENST00000379341.8	protein_coding	23667446,23671529,23674990,23679165,23682396,23683671,23686285	23667811,23671646,23675106,23679287,23682526,23683705,23686399	Gene ID= ENSG00000123131.12 TPM= 60.71 Transcript Type= protein_coding
chrX	23701055	23743268	23701055	23743268	-	transcript488.chrX.nnic@ACOT9	transcript488.chrX.nnic	protein_coding	23743125,23735919,23734341,23733172,23730816,23730527,23722670,23721881,23713135,23707877,23706628,23705768,23705509,23704993,23704694,23703617,23701055	23743268,23736016,23734367,23733217,23730986,23730564,23722753,23721984,23713208,23707944,23706739,23705858,23705594,23705080,23704844,23703982,23701813	Gene ID= ENSG00000123130.16 TPM= 3.5 Transcript Type= NA
chrX	23701055	23743282	23701055	23743282	-	transcript489.chrX.nnic@ACOT9	transcript489.chrX.nnic	protein_coding	23743125,23735919,23734341,23733172,23730816,23730527,23722670,23721881,23713135,23707877,23706628,23705768,23705509,23704993,23704694,23702550,23701055	23743282,23736016,23734367,23733217,23730986,23730564,23722753,23721984,23713208,23707944,23706739,23705858,23705594,23705080,23704844,23703982,23701827	Gene ID= ENSG00000123130.16 TPM= 4.67 Transcript Type= NA
chrX	23703677	23743297	23703677	23743297	-	transcript499.chrX.nnic@ACOT9	transcript499.chrX.nnic	protein_coding	23743125,23735919,23734341,23733172,23730816,23730527,23722670,23721881,23713135,23707296,23706628,23705768,23705509,23704993,23704694,23703677	23743297,23736016,23734367,23733217,23730986,23730564,23722753,23721984,23713208,23707944,23707221,23705858,23705594,23705080,23704844,23703982	Gene ID= ENSG00000123130.16 TPM= 4.83 Transcript Type= NA
chrX	23703677	23743268	23703677	23743268	-	transcript508.chrX.nic@ACOT9	transcript508.chrX.nic	protein_coding	23743125,23735919,23734341,23733172,23730816,23730527,23722670,23721881,23713135,23706628,23705768,23705509,23704993,23704694,23703677	23743268,23736016,23734367,23733217,23730986,23730564,23722753,23721984,23713208,23707944,23705858,23705594,23705080,23704844,23703982	Gene ID= ENSG00000123130.16 TPM= 3.67 Transcript Type= NA
chrX	23702253	23743273	23702253	23743273	-	ENST00000379303.9@ACOT9	ENST00000379303.9	protein_coding	23743125,23735919,23734341,23733172,23730816,23730527,23722670,23721881,23713135,23707877,23706628,23705768,23705509,23704993,23704694,23702253	23743273,23736016,23734367,23733217,23730986,23730564,23722753,23721984,23713208,23707944,23706739,23705858,23705594,23705080,23704844,23703982	Gene ID= ENSG00000123130.16 TPM= 11.68 Transcript Type= protein_coding
chrX	23703671	23743276	23703671	23743276	-	ENST00000336430.11@ACOT9	ENST00000336430.11	protein_coding	23743125,23735919,23733172,23730816,23730527,23722670,23721881,23713135,23707877,23706628,23705768,23705509,23704993,23704694,23703671	23743276,23736016,23733217,23730986,23730564,23722753,23721984,23713208,23707944,23706739,23705858,23705594,23705080,23704844,23703982	Gene ID= ENSG00000123130.16 TPM= 11.84 Transcript Type= protein_coding
chrX	23740982	23741364	23740982	23741364	+	transcript518.chrX.nnic@NA	transcript518.chrX.nnic	NA	23740982	23741364	Gene ID= novel_gene_chrX_519 TPM= 2.34 Transcript Type= NA
chrX	23783173	23786226	23783173	23786226	+	ENST00000379270.4@SAT1	ENST00000379270.4	protein_coding	23783173,23783658,23783800,23785328,23785520,23785686	23783417,23783709,23783883,23785429,23785560,23786226	Gene ID= ENSG00000130066.16 TPM= 641.28 Transcript Type= protein_coding
chrX	23783171	23786210	23783171	23786210	+	transcript532.chrX.nic@SAT1	transcript532.chrX.nic	protein_coding	23783171,23783658,23783800,23785520,23785686	23783417,23783709,23785429,23785560,23786210	Gene ID= ENSG00000130066.16 TPM= 247.6 Transcript Type= NA
chrX	23783171	23786210	23783171	23786210	+	transcript540.chrX.nic@SAT1	transcript540.chrX.nic	protein_coding	23783171,23783658,23785520,23785686	23783417,23785429,23785560,23786210	Gene ID= ENSG00000130066.16 TPM= 33.35 Transcript Type= NA
chrX	23783173	23784411	23783173	23784411	+	ENST00000379253.7@SAT1	ENST00000379253.7	protein_coding	23783173,23783658,23783800	23783417,23783709,23784411	Gene ID= ENSG00000130066.16 TPM= 7.01 Transcript Type= protein_coding
chrX	23783173	23784213	23783173	23784213	+	ENST00000379251.7@SAT1	ENST00000379251.7	protein_coding	23783173,23783658	23783417,23784213	Gene ID= ENSG00000130066.16 TPM= 3.5 Transcript Type= protein_coding
chrX	23783197	23786210	23783197	23786210	+	ENST00000489394.5@SAT1	ENST00000489394.5	protein_coding	23783197,23783658,23783800,23784294,23785328,23785520,23785686	23783417,23783709,23783883,23784403,23785429,23785560,23786210	Gene ID= ENSG00000130066.16 TPM= 46.97 Transcript Type= processed_transcript
chrX	23833353	23907934	23833353	23907934	-	ENST00000379226.8@APOO	ENST00000379226.8	protein_coding	23907694,23880845,23878915,23874403,23868593,23858642,23856302,23840313,23833353	23907934,23880952,23879034,23874457,23868688,23858733,23856382,23840377,23833612	Gene ID= ENSG00000184831.13 TPM= 4.67 Transcript Type= protein_coding
chrX	23833360	23907915	23833360	23907915	-	transcript551.chrX.nic@APOO	transcript551.chrX.nic	protein_coding	23907694,23880845,23878915,23874403,23868593,23858642,23856302,23840313,23833360	23907915,23880952,23879034,23874457,23868688,23858733,23856382,23840377,23833510	Gene ID= ENSG00000184831.13 TPM= 3.5 Transcript Type= NA
chrX	23983720	24025308	23983720	24025308	-	transcript557.chrX.nic@KLHL15	transcript557.chrX.nic	protein_coding	24024857,24005989,23983720	24025308,24006700,23989030	Gene ID= ENSG00000174010.9 TPM= 5.84 Transcript Type= NA
chrX	24054716	24077971	24054716	24077971	+	ENST00000253039.8@EIF2S3	ENST00000253039.8	protein_coding	24054716,24055615,24057421,24057633,24060088,24062416,24064201,24065998,24067964,24071558,24073091,24076722	24055037,24055678,24057548,24057754,24060182,24062574,24064335,24066092,24068108,24071727,24073263,24077971	Gene ID= ENSG00000130741.10 TPM= 251.42 Transcript Type= protein_coding
chrX	24073648	24075709	24073648	24075709	-	transcript572.chrX.nnic@NA	transcript572.chrX.nnic	NA	24073648	24075709	Gene ID= novel_gene_chrX_573 TPM= 7.01 Transcript Type= NA
chrX	24149427	24214397	24149427	24214397	+	transcript577.chrX.nic@ZFX	transcript577.chrX.nic	protein_coding	24149427,24172715,24179183,24207326,24207712,24208218,24208900,24210193	24149794,24172800,24179770,24207475,24207855,24208370,24209040,24214397	Gene ID= ENSG00000005889.15 TPM= 7.01 Transcript Type= NA
chrX	24465221	24534425	24465221	24534425	+	ENST00000379162.8@PDK3	ENST00000379162.8	protein_coding	24465221,24494742,24498829,24503327,24505209,24518933,24526198,24527574,24528076,24531657,24533929	24465561,24494883,24498900,24503511,24505298,24519010,24526274,24527675,24528186,24531770,24534425	Gene ID= ENSG00000067992.12 TPM= 2.34 Transcript Type= protein_coding
chrX	24545516	24550466	24545516	24550466	+	ENST00000568479.1@AC004656.1	ENST00000568479.1	sense_overlapping	24545516	24550466	Gene ID= ENSG00000260822.1 TPM= 3.5 Transcript Type= sense_overlapping
chrX	24693919	24996986	24693919	24996986	+	ENST00000379068.7@POLA1	ENST00000379068.7	protein_coding	24693919,24699425,24703251,24704389,24714554,24715141,24716362,24716884,24717290,24717580,24723155,24724335,24725981,24726933,24727782,24732370,24733755,24735399,24737625,24739375,24741375,24742002,24743230,24745418,24748311,24748870,24809898,24810708,24812658,24814979,24821452,24826427,24841652,24843546,24888006,24930453,24995805	24694004,24699549,24703347,24704469,24714669,24715203,24716454,24716971,24717491,24717758,24723267,24724451,24726055,24727071,24727936,24732454,24733816,24735488,24737741,24739550,24741504,24742121,24743329,24745542,24748460,24748992,24809930,24810800,24812863,24815111,24821583,24826601,24841830,24843677,24888122,24930549,24996986	Gene ID= ENSG00000101868.10 TPM= 9.34 Transcript Type= protein_coding
chrX	24788392	24789069	24788392	24789069	-	ENST00000447718.1@EEF1B2P3	ENST00000447718.1	processed_pseudogene	24788392	24789069	Gene ID= ENSG00000232472.1 TPM= 4.67 Transcript Type= processed_pseudogene
chrX	30653422	30729707	30653422	30729707	+	transcript594.chrX.nnic@GK	transcript594.chrX.nnic	protein_coding	30653422,30665511,30668012,30677375,30687533,30691123,30694400,30696042,30696617,30697732,30700414,30700838,30707556,30708054,30718538,30719419,30720011,30720621,30720852,30724101,30728732	30653615,30665584,30668118,30677452,30687616,30691199,30694537,30696151,30696683,30697749,30700449,30700905,30707598,30708134,30718616,30719515,30720095,30720741,30720995,30724181,30729707	Gene ID= ENSG00000198814.12 TPM= 7.01 Transcript Type= NA
chrX	30653359	30731456	30653359	30731456	+	ENST00000427190.5@GK	ENST00000427190.5	protein_coding	30653359,30665511,30668012,30677375,30691123,30694400,30696042,30696617,30697732,30700414,30700838,30707556,30708054,30718538,30719419,30720011,30720621,30720852,30724101,30727466,30728732	30653615,30665584,30668118,30677452,30691199,30694537,30696151,30696683,30697749,30700449,30700905,30707598,30708134,30718616,30719515,30720095,30720741,30720995,30724181,30727552,30731456	Gene ID= ENSG00000198814.12 TPM= 3.5 Transcript Type= protein_coding
chrX	30653359	30730608	30653359	30730608	+	ENST00000378946.7@GK	ENST00000378946.7	protein_coding	30653359,30665511,30668012,30677375,30691123,30694400,30696042,30696617,30697732,30700414,30700838,30707556,30708054,30718538,30719419,30720011,30720621,30720852,30724101,30728732	30653615,30665584,30668118,30677452,30691199,30694537,30696151,30696683,30697749,30700449,30700905,30707598,30708134,30718616,30719515,30720095,30720741,30720995,30724181,30730608	Gene ID= ENSG00000198814.12 TPM= 57.21 Transcript Type= protein_coding
chrX	30653359	30730608	30653359	30730608	+	ENST00000378943.7@GK	ENST00000378943.7	protein_coding	30653359,30665511,30668012,30677375,30691123,30694400,30696042,30696617,30700414,30700838,30707556,30708054,30718538,30719419,30720011,30720621,30720852,30724101,30727466,30728732	30653615,30665584,30668118,30677452,30691199,30694537,30696151,30696683,30700449,30700905,30707598,30708134,30718616,30719515,30720095,30720741,30720995,30724181,30727552,30730608	Gene ID= ENSG00000198814.12 TPM= 5.84 Transcript Type= protein_coding
chrX	31119228	31266983	31119228	31266983	-	transcript630.chrX.nic@DMD	transcript630.chrX.nic	protein_coding	31266810,31260955,31223047,31209498,31206582,31203961,31182738,31180370,31178669,31173539,31172348,31169443,31147275,31146291,31134102,31126642,31119228	31266983,31261016,31223121,31209699,31206667,31204118,31182904,31180481,31178805,31173604,31172413,31169601,31147518,31146414,31134194,31126673,31121930	Gene ID= ENSG00000198947.15 TPM= 7.59 Transcript Type= NA
chrX	31119219	31266952	31119219	31266952	-	ENST00000378723.7@DMD	ENST00000378723.7	protein_coding	31266810,31260955,31223047,31209498,31206582,31203961,31182738,31180370,31178669,31177932,31173539,31172348,31169443,31147275,31146291,31134102,31119219	31266952,31261016,31223121,31209699,31206667,31204118,31182904,31180481,31178805,31177970,31173604,31172413,31169601,31147518,31146414,31134194,31121930	Gene ID= ENSG00000198947.15 TPM= 4.09 Transcript Type= protein_coding
chrX	31121556	31266907	31121556	31266907	-	ENST00000361471.8@DMD	ENST00000361471.8	protein_coding	31266810,31260955,31223047,31209498,31206582,31203961,31182738,31180370,31178669,31173539,31172348,31169443,31147275,31146291,31134102,31121556	31266907,31261016,31223121,31209699,31206667,31204118,31182904,31180481,31178805,31173604,31172413,31169601,31147518,31146414,31134194,31121930	Gene ID= ENSG00000198947.15 TPM= 1.17 Transcript Type= protein_coding
chrX	34627064	34657288	34627064	34657288	-	ENST00000275954.3@TMEM47	ENST00000275954.3	protein_coding	34656804,34639247,34627064	34657288,34639387,34630491	Gene ID= ENSG00000147027.3 TPM= 108.59 Transcript Type= protein_coding
chrX	37349275	37457295	37349275	37457295	+	ENST00000378628.8@PRRG1	ENST00000378628.8	protein_coding	37349275,37406209,37425840,37453136	37349395,37406259,37426000,37457295	Gene ID= ENSG00000130962.17 TPM= 9.34 Transcript Type= protein_coding
chrX	37685759	37732130	37685759	37732130	+	ENST00000378616.3@XK	ENST00000378616.3	protein_coding	37685759,37694286,37727636	37686206,37694548,37732130	Gene ID= ENSG00000047597.5 TPM= 2.34 Transcript Type= protein_coding
chrX	37780011	37813461	37780011	37813461	+	ENST00000378588.4@CYBB	ENST00000378588.4	protein_coding	37780011,37782088,37783490,37791975,37793665,37795951,37798955,37801256,37803877,37805006,37806387,37809567,37810791	37780122,37782183,37783600,37792059,37793810,37796141,37799084,37801348,37804130,37805168,37806533,37809691,37813461	Gene ID= ENSG00000165168.7 TPM= 79.4 Transcript Type= protein_coding
chrX	37838836	37847637	37838836	37847637	-	ENST00000378578.8@DYNLT3	ENST00000378578.8	protein_coding	37847481,37846317,37841782,37841028,37838836	37847637,37846358,37841905,37841105,37840651	Gene ID= ENSG00000165169.10 TPM= 59.55 Transcript Type= protein_coding
chrX	38149339	38220899	38149339	38220899	-	ENST00000378533.3@SRPX	ENST00000378533.3	protein_coding	38220696,38178285,38174160,38171881,38164769,38160933,38160017,38156896,38154462,38149339	38220899,38178344,38174351,38172057,38164895,38161054,38160196,38157029,38154583,38149894	Gene ID= ENSG00000101955.14 TPM= 163.85 Transcript Type= protein_coding
chrX	38149336	38220924	38149336	38220924	-	ENST00000544439.5@SRPX	ENST00000544439.5	protein_coding	38220696,38174160,38171881,38164769,38160933,38160017,38156896,38154462,38149336	38220924,38174351,38172057,38164895,38161054,38160196,38157029,38154583,38149894	Gene ID= ENSG00000101955.14 TPM= 35.41 Transcript Type= protein_coding
chrX	38149336	38220924	38149336	38220924	-	ENST00000538295.5@SRPX	ENST00000538295.5	protein_coding	38220696,38178285,38174160,38171881,38164769,38160933,38160017,38156896,38149336	38220924,38178344,38174351,38172057,38164895,38161054,38160196,38157029,38149894	Gene ID= ENSG00000101955.14 TPM= 7.01 Transcript Type= protein_coding
chrX	38269163	38327564	38269163	38327564	-	ENST00000318842.11@RPGR	ENST00000318842.11	protein_coding	38327340,38323399,38322853,38321027,38318829,38317316,38310615,38304635,38301247,38298956,38297284,38291393,38290959,38287861,38287094,38276587,38275089,38273386,38269163	38327564,38323524,38322945,38321089,38318987,38317465,38310773,38304790,38301371,38299141,38297452,38291484,38291024,38288041,38287245,38276772,38275146,38273477,38269832	Gene ID= ENSG00000156313.12 TPM= 8.17 Transcript Type= protein_coding
chrX	38269163	38327468	38269163	38327468	-	transcript672.chrX.nic@RPGR	transcript672.chrX.nic	protein_coding	38327340,38323399,38322853,38321027,38318829,38317316,38310615,38304635,38301247,38298956,38297284,38291393,38290959,38276587,38275089,38273386,38269163	38327468,38323524,38322945,38321089,38318987,38317465,38310773,38304790,38301371,38299141,38297452,38291484,38291024,38276772,38275146,38273477,38269832	Gene ID= ENSG00000156313.12 TPM= 2.34 Transcript Type= NA
chrX	38804285	38806442	38804285	38806442	+	transcript681.chrX.nnic@NA	transcript681.chrX.nnic	NA	38804285	38806442	Gene ID= novel_gene_chrX_682 TPM= 28.02 Transcript Type= NA
chrX	40051248	40073355	40051248	40073355	-	transcript685.chrX.nic@BCOR	transcript685.chrX.nic	protein_coding	40072349,40071637,40070973,40064336,40063608,40062746,40062139,40057155,40055368,40054256,40053886,40051248	40073355,40071690,40071159,40064599,40063850,40063071,40062393,40057321,40055513,40054333,40054042,40052400	Gene ID= ENSG00000183337.16 TPM= 8.17 Transcript Type= NA
chrX	40051248	40097403	40051248	40097403	-	ENST00000378444.8@BCOR	ENST00000378444.8	protein_coding	40097215,40077844,40076454,40072349,40071637,40070973,40064336,40063608,40062746,40062139,40057155,40055368,40054256,40053886,40051248	40097403,40077969,40076532,40075180,40071690,40071159,40064599,40063952,40063071,40062393,40057321,40055513,40054333,40054042,40052400	Gene ID= ENSG00000183337.16 TPM= 4.67 Transcript Type= protein_coding
chrX	40051246	40177329	40051246	40177329	-	ENST00000378455.8@BCOR	ENST00000378455.8	protein_coding	40177007,40077844,40076454,40072349,40070973,40064336,40063608,40062746,40062139,40057155,40055368,40054256,40053886,40051246	40177329,40077969,40076532,40075180,40071159,40064599,40063850,40063071,40062393,40057321,40055513,40054333,40054042,40052400	Gene ID= ENSG00000183337.16 TPM= 5.84 Transcript Type= protein_coding
chrX	40580875	40606848	40580875	40606848	+	ENST00000636580.1@ATP6AP2	ENST00000636580.1	protein_coding	40580875,40588986,40591234,40597249,40597527,40598681,40599592,40600762,40605561	40581102,40589116,40591365,40597344,40597664,40598734,40599741,40600881,40606848	Gene ID= ENSG00000182220.14 TPM= 382.97 Transcript Type= protein_coding
chrX	40580958	40606619	40580958	40606619	+	ENST00000378438.9@ATP6AP2	ENST00000378438.9	protein_coding	40580958,40588986,40591234,40597249,40597527,40598681,40599592,40600762,40605564	40581102,40589116,40591365,40597344,40597664,40598734,40599741,40600881,40606619	Gene ID= ENSG00000182220.14 TPM= 45.54 Transcript Type= protein_coding
chrX	40580910	40606606	40580910	40606606	+	ENST00000637327.1@ATP6AP2	ENST00000637327.1	protein_coding	40580910,40591234,40597249,40597527,40598681,40599592,40600762,40605561	40581102,40591365,40597344,40597664,40598734,40599741,40600881,40606606	Gene ID= ENSG00000182220.14 TPM= 3.5 Transcript Type= protein_coding
chrX	40580970	40606635	40580970	40606635	+	ENST00000636574.1@ATP6AP2	ENST00000636574.1	protein_coding	40580970,40588986,40591234,40597249,40597529,40598681,40599592,40600762,40605561	40581102,40589116,40591365,40597344,40597664,40598734,40599741,40600881,40606635	Gene ID= ENSG00000182220.14 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chrX	40629033	40647547	40629033	40647547	-	ENST00000327877.9@CXorf38	ENST00000327877.9	protein_coding	40647305,40647007,40639009,40637007,40636533,40630614,40629033	40647547,40647141,40639128,40637156,40636712,40630773,40630162	Gene ID= ENSG00000185753.12 TPM= 1.17 Transcript Type= protein_coding
chrX	40651270	40735886	40651270	40735886	-	transcript706.chrX.nic@MED14	transcript706.chrX.nic	protein_coding	40735722,40729319,40726746,40714537,40713778,40712914,40712186,40711169,40709979,40709348,40703444,40701165,40697024,40692708,40692183,40688454,40682836,40682603,40681852,40680758,40679864,40675221,40671861,40666720,40664307,40662925,40659428,40659227,40654935,40654364,40651270	40735886,40729345,40726851,40714710,40713907,40713042,40712293,40711301,40710129,40709459,40703569,40701243,40697183,40692902,40692317,40688530,40682996,40682749,40681943,40680910,40680133,40675361,40671972,40666851,40664489,40663160,40659607,40659334,40655060,40654556,40651879	Gene ID= ENSG00000180182.10 TPM= 4.67 Transcript Type= NA
chrX	41085432	41090236	41085432	41090236	-	transcript712.chrX.nnic@NA	transcript712.chrX.nnic	NA	41085432	41090236	Gene ID= novel_gene_chrX_713 TPM= 86.4 Transcript Type= NA
chrX	41333398	41350274	41333398	41350274	+	ENST00000399959.6@DDX3X	ENST00000399959.6	protein_coding	41333398,41337408,41339036,41341484,41342495,41342737,41343216,41343737,41344030,41344239,41345180,41345404,41346229,41346505,41346859,41347312,41347640	41334297,41337465,41339083,41341616,41342653,41342836,41343351,41343822,41344128,41344399,41345324,41345548,41346410,41346622,41347012,41347451,41350274	Gene ID= ENSG00000215301.9 TPM= 53.71 Transcript Type= protein_coding
chrX	41519527	41923536	41519527	41923536	-	transcript723.chrX.nic@CASK	transcript723.chrX.nic	protein_coding	41922930,41853115,41787178,41745524,41739384,41671428,41665277,41660439,41636578,41626604,41622617,41609904,41589515,41586907,41578340,41569668,41561559,41559779,41557032,41553719,41542691,41534893,41534706,41531007,41523951,41519527	41923536,41853227,41787283,41745601,41739456,41671530,41665452,41660561,41636661,41626703,41622634,41610025,41589592,41586987,41578528,41569746,41561644,41559847,41557100,41553915,41542806,41534973,41534786,41531209,41524034,41520596	Gene ID= ENSG00000147044.20 TPM= 4.67 Transcript Type= NA
chrX	41688973	41697277	41688973	41697277	+	ENST00000378142.8@GPR34	ENST00000378142.8	protein_coding	41688973,41689743,41695555	41689084,41689835,41697277	Gene ID= ENSG00000171659.13 TPM= 24.52 Transcript Type= protein_coding
chrX	41689006	41697273	41689006	41697273	+	ENST00000378138.5@GPR34	ENST00000378138.5	protein_coding	41689006,41689746,41695628	41689084,41689835,41697273	Gene ID= ENSG00000171659.13 TPM= 3.5 Transcript Type= protein_coding
chrX	43654907	43746824	43654907	43746824	+	ENST00000542639.5@MAOA	ENST00000542639.5	protein_coding	43654907,43657862,43683513,43693291,43711872,43712705,43728173,43731241,43731694,43732699,43736227,43740681,43741950,43743794,43744109,43744367	43656414,43657969,43683607,43693428,43711976,43712796,43728314,43731390,43731853,43732795,43736280,43740738,43742047,43743905,43744171,43746824	Gene ID= ENSG00000189221.9 TPM= 40.28 Transcript Type= protein_coding
chrX	43656219	43746821	43656219	43746821	+	ENST00000338702.3@MAOA	ENST00000338702.3	protein_coding	43656219,43683513,43693291,43711872,43712705,43728173,43731241,43731694,43732699,43736227,43740681,43741950,43743794,43744109,43744367	43656414,43683607,43693428,43711976,43712796,43728314,43731390,43731853,43732795,43736280,43740738,43742047,43743905,43744171,43746821	Gene ID= ENSG00000189221.9 TPM= 256.29 Transcript Type= protein_coding
chrX	43855663	43882507	43855663	43882507	-	transcript771.chrX.nnic@MAOB	transcript771.chrX.nnic	protein_coding	43882254,43855663	43882507,43856006	Gene ID= ENSG00000069535.13 TPM= 3.5 Transcript Type= NA
chrX	43766611	43882447	43766611	43882447	-	ENST00000378069.4@MAOB	ENST00000378069.4	protein_coding	43882254,43843670,43838868,43803300,43802172,43797125,43795739,43793419,43781448,43780342,43778682,43775175,43769307,43768654,43766611	43882447,43843764,43839005,43803404,43802263,43797266,43795888,43793578,43781544,43780395,43778739,43775272,43769418,43768716,43767618	Gene ID= ENSG00000069535.13 TPM= 134.27 Transcript Type= protein_coding
chrX	44523639	44543001	44523639	44543001	-	ENST00000378045.4@FUNDC1	ENST00000378045.4	protein_coding	44542805,44541945,44538467,44527237,44523639	44543001,44542101,44538542,44527365,44524275	Gene ID= ENSG00000069509.5 TPM= 2.34 Transcript Type= protein_coding
chrX	44873143	45112215	44873143	45112215	+	transcript780.chrX.nic@KDM6A	transcript780.chrX.nic	protein_coding	44873143,44873924,44961284,44974666,45010961,45020610,45034931,45037655,45051709,45053829,45059006,45059247,45060609,45061324,45063422,45069579,45076697,45078400,45079146,45082576,45082715,45083460,45085865,45089743,45090723,45107410,45110079,45111382	44873712,44873987,44961392,44974715,45011019,45020730,45034985,45037689,45051802,45053955,45059104,45059466,45060764,45061419,45063817,45070357,45076826,45078505,45079351,45082640,45082789,45083608,45085979,45089930,45090864,45107536,45110249,45112215	Gene ID= ENSG00000147050.14 TPM= 3.5 Transcript Type= NA
chrX	44873177	45112598	44873177	45112598	+	ENST00000536777.5@KDM6A	ENST00000536777.5	protein_coding	44873177,44873924,44961284,44974666,45010961,45020610,45034931,45037655,45051709,45053829,45059006,45059247,45061324,45062647,45063422,45069579,45076697,45078400,45079146,45082576,45082715,45083460,45085865,45089743,45090723,45107410,45110079,45111382	44873712,44873987,44961392,44974715,45011019,45020730,45034985,45037689,45051802,45053955,45059104,45059466,45061419,45062748,45063817,45070357,45076826,45078505,45079351,45082640,45082789,45083608,45085979,45089930,45090864,45107536,45110249,45112598	Gene ID= ENSG00000147050.14 TPM= 1.17 Transcript Type= protein_coding
chrX	45048109	45049311	45048109	45049311	-	transcript786.chrX.nnic@NA	transcript786.chrX.nnic	NA	45048109	45049311	Gene ID= novel_gene_chrX_787 TPM= 2.34 Transcript Type= NA
chrX	45148374	45200901	45148374	45200901	-	ENST00000398000.6@CXorf36	ENST00000398000.6	protein_coding	45200594,45191751,45157715,45153910,45148374	45200901,45192015,45157888,45154198,45151992	Gene ID= ENSG00000147113.16 TPM= 42.03 Transcript Type= protein_coding
chrX	45162310	45200901	45162310	45200901	-	ENST00000377934.4@CXorf36	ENST00000377934.4	protein_coding	45200594,45191751,45162310	45200901,45192015,45164249	Gene ID= ENSG00000147113.16 TPM= 7.01 Transcript Type= protein_coding
chrX	46447292	46473538	46447292	46473538	+	transcript803.chrX.nnic@KRBOX4	transcript803.chrX.nnic	protein_coding	46447292,46448200,46450431,46462748,46463198,46471142,46472750	46447346,46448310,46450475,46462874,46463293,46471185,46473538	Gene ID= ENSG00000147121.15 TPM= 2.34 Transcript Type= NA
chrX	46446857	46474639	46446857	46474639	+	ENST00000344302.8@KRBOX4	ENST00000344302.8	protein_coding	46446857,46448200,46450431,46462748,46463198,46472750	46447346,46448310,46450475,46462874,46463308,46474639	Gene ID= ENSG00000147121.15 TPM= 1.17 Transcript Type= protein_coding
chrX	46545493	46548408	46545493	46548408	+	ENST00000421685.2@ZNF674-AS1	ENST00000421685.2	lincRNA	46545493,46546466	46545627,46548408	Gene ID= ENSG00000230844.2 TPM= 7.01 Transcript Type= lincRNA
chrX	46573784	46598408	46573784	46598408	+	ENST00000276055.3@CHST7	ENST00000276055.3	protein_coding	46573784,46597760	46575423,46598408	Gene ID= ENSG00000147119.3 TPM= 21.02 Transcript Type= protein_coding
chrX	46599467	46603341	46599467	46603341	-	transcript832.chrX.nnic@NA	transcript832.chrX.nnic	NA	46599467	46603341	Gene ID= novel_gene_chrX_833 TPM= 3.5 Transcript Type= NA
chrX	46836940	46882358	46836940	46882358	+	ENST00000218340.3@RP2	ENST00000218340.3	protein_coding	46836940,46853476,46859988,46877505,46879686	46837202,46854141,46860102,46877590,46882358	Gene ID= ENSG00000102218.5 TPM= 63.05 Transcript Type= protein_coding
chrX	46912433	47061241	46912433	47061241	+	ENST00000614628.4@JADE3	ENST00000614628.4	protein_coding	46912433,46984884,46985713,46998120,47024724,47027892,47033621,47038949,47054158,47056082,47058167	46912719,46984940,46985792,46998277,47024914,47028103,47033788,47039065,47054628,47056199,47061241	Gene ID= ENSG00000102221.13 TPM= 5.84 Transcript Type= protein_coding
chrX	47078355	47093314	47078355	47093314	+	ENST00000397180.5@RGN	ENST00000397180.5	protein_coding	47078355,47080317,47081130,47084418,47089776,47091678,47092061,47092897	47078709,47080936,47081307,47084600,47089991,47091809,47092215,47093314	Gene ID= ENSG00000130988.12 TPM= 3.5 Transcript Type= protein_coding
chrX	47078329	47088947	47078329	47088947	+	transcript849.chrX.nic@RGN	transcript849.chrX.nic	protein_coding	47078329,47081130,47084418	47078709,47081307,47088947	Gene ID= ENSG00000130988.12 TPM= 3.5 Transcript Type= NA
chrX	47078380	47093313	47078380	47093313	+	ENST00000352078.8@RGN	ENST00000352078.8	protein_coding	47078380,47081130,47084418,47089776,47091678,47092061,47092897	47078709,47081307,47084600,47089991,47091809,47092215,47093313	Gene ID= ENSG00000130988.12 TPM= 10.51 Transcript Type= protein_coding
chrX	47142216	47145504	47142216	47145504	-	ENST00000377811.3@NDUFB11	ENST00000377811.3	protein_coding	47144473,47142614,47142216	47145504,47142744,47142440	Gene ID= ENSG00000147123.10 TPM= 44.37 Transcript Type= protein_coding
chrX	47144869	47186811	47144869	47186811	+	ENST00000377604.7@RBM10	ENST00000377604.7	protein_coding	47144869,47147357,47169315,47171028,47173128,47175019,47176500,47179103,47179319,47179880,47180212,47180419,47181215,47181507,47181749,47181951,47182162,47185055,47185302,47185442,47185716,47186065,47186258,47186474	47145485,47147498,47169498,47171258,47173197,47175092,47176586,47179163,47179495,47180040,47180309,47180506,47181401,47181646,47181866,47182042,47182326,47185204,47185367,47185630,47185790,47186171,47186387,47186811	Gene ID= ENSG00000182872.15 TPM= 42.42 Transcript Type= protein_coding
chrX	47145251	47186813	47145251	47186813	+	transcript855.chrX.nic@RBM10	transcript855.chrX.nic	protein_coding	47145251,47147357,47169315,47171028,47173128,47175019,47176500,47179103,47179319,47179880,47180212,47180419,47181215,47181507,47181749,47181951,47182162,47185055,47185302,47185442,47185716,47186065,47186258,47186474	47145516,47147498,47169498,47171258,47173197,47175092,47176586,47179163,47179495,47180037,47180309,47180506,47181401,47181646,47181866,47182042,47182326,47185204,47185367,47185630,47185790,47186171,47186387,47186813	Gene ID= ENSG00000182872.15 TPM= 13.23 Transcript Type= NA
chrX	47145279	47186813	47145279	47186813	+	ENST00000628161.2@RBM10	ENST00000628161.2	protein_coding	47145279,47147357,47169315,47173128,47175019,47176500,47179103,47179319,47179880,47180212,47180419,47181215,47181507,47181749,47181951,47182162,47185055,47185302,47185442,47185716,47186065,47186258,47186474	47145485,47147498,47169498,47173197,47175092,47176586,47179163,47179495,47180037,47180309,47180506,47181401,47181646,47181866,47182042,47182326,47185204,47185367,47185630,47185790,47186171,47186387,47186813	Gene ID= ENSG00000182872.15 TPM= 13.23 Transcript Type= protein_coding
chrX	47193802	47215128	47193802	47215128	+	transcript865.chrX.nnic@UBA1	transcript865.chrX.nnic	protein_coding	47193802,47196947,47198803,47199048,47199209,47199480,47200894,47201276,47201478,47202156,47202358,47202638,47202943,47203134,47203541,47205948,47206248,47209623,47209928,47210842,47211036,47212424,47212771,47212990,47214327,47214537,47214794	47194024,47197024,47198919,47199106,47199377,47199614,47201000,47201366,47201610,47202253,47202504,47202814,47203047,47203214,47203696,47206113,47206444,47209687,47210123,47210916,47211225,47212512,47212863,47213181,47214428,47214637,47215128	Gene ID= ENSG00000130985.16 TPM= 46.08 Transcript Type= NA
chrX	47195974	47215128	47195974	47215128	+	transcript876.chrX.nic@UBA1	transcript876.chrX.nic	protein_coding	47195974,47199048,47199209,47199480,47200894,47201276,47201478,47202156,47202358,47202638,47202943,47203134,47203541,47205948,47206248,47209623,47209928,47210842,47211036,47212424,47212771,47212990,47214327,47214537,47214794	47198919,47199106,47199377,47199614,47201000,47201366,47201610,47202253,47202504,47202814,47203047,47203214,47203696,47206113,47206444,47209687,47210123,47210916,47211225,47212512,47212863,47213181,47214428,47214637,47215128	Gene ID= ENSG00000130985.16 TPM= 32.46 Transcript Type= NA
chrX	47204140	47215128	47204140	47215128	+	transcript880.chrX.nic@UBA1	transcript880.chrX.nic	protein_coding	47204140,47206248,47209623,47209928,47210842,47211036,47212424,47212771,47212990,47214327,47214537,47214794	47206113,47206444,47209687,47210123,47210916,47211225,47212512,47212863,47213181,47214428,47214637,47215128	Gene ID= ENSG00000130985.16 TPM= 24.29 Transcript Type= NA
chrX	47190861	47215128	47190861	47215128	+	ENST00000377351.8@UBA1	ENST00000377351.8	protein_coding	47190861,47198803,47199048,47199209,47199480,47200894,47201276,47201478,47202156,47202358,47202638,47202943,47203134,47203541,47205948,47206248,47209623,47209928,47210842,47211036,47212424,47212771,47212990,47214327,47214537,47214794	47190950,47198919,47199106,47199377,47199614,47201000,47201366,47201610,47202253,47202504,47202814,47203047,47203214,47203696,47206113,47206444,47209687,47210123,47210916,47211225,47212512,47212863,47213181,47214428,47214637,47215128	Gene ID= ENSG00000130985.16 TPM= 48.42 Transcript Type= protein_coding
chrX	47193842	47215128	47193842	47215128	+	ENST00000335972.10@UBA1	ENST00000335972.10	protein_coding	47193842,47198803,47199048,47199209,47199480,47200894,47201276,47201478,47202156,47202358,47202638,47202943,47203134,47203541,47205948,47206248,47209623,47209928,47210842,47211036,47212424,47212771,47212990,47214327,47214537,47214794	47194024,47198919,47199106,47199377,47199614,47201000,47201366,47201610,47202253,47202504,47202814,47203047,47203214,47203696,47206113,47206444,47209687,47210123,47210916,47211225,47212512,47212863,47213181,47214428,47214637,47215128	Gene ID= ENSG00000130985.16 TPM= 172.19 Transcript Type= protein_coding
chrX	47218697	47228990	47218697	47228990	+	transcript886.chrX.nic@CDK16	transcript886.chrX.nic	protein_coding	47218697,47222261,47223552,47224385,47224618,47224834,47224988,47225772,47225965,47226279,47226583,47226812,47226994,47227181,47227379,47228567,47228731	47219105,47222342,47223759,47224518,47224743,47224890,47225102,47225866,47226027,47226402,47226703,47226909,47227099,47227223,47227469,47228644,47228990	Gene ID= ENSG00000102225.15 TPM= 8.92 Transcript Type= NA
chrX	47218697	47229997	47218697	47229997	+	transcript888.chrX.nic@CDK16	transcript888.chrX.nic	protein_coding	47218697,47222261,47223552,47224385,47224618,47224834,47224988,47225772,47225965,47226279,47226583,47226812,47226994,47227181,47227379,47228567,47228731	47219105,47222380,47223759,47224518,47224743,47224890,47225102,47225866,47226027,47226402,47226703,47226909,47227099,47227223,47227469,47228644,47229997	Gene ID= ENSG00000102225.15 TPM= 9.64 Transcript Type= NA
chrX	47218233	47229997	47218233	47229997	+	ENST00000457458.6@CDK16	ENST00000457458.6	protein_coding	47218233,47223552,47224385,47224618,47224834,47224988,47225772,47225965,47226279,47226583,47226812,47226994,47227181,47227379,47228567,47228731	47218664,47223759,47224518,47224743,47224890,47225102,47225866,47226027,47226402,47226703,47226909,47227099,47227223,47227469,47228644,47229997	Gene ID= ENSG00000102225.15 TPM= 7.31 Transcript Type= protein_coding
chrX	47218675	47229997	47218675	47229997	+	transcript901.chrX.nic@CDK16	transcript901.chrX.nic	protein_coding	47218675,47223552,47224385,47224618,47224834,47224988,47225772,47225965,47226583,47226812,47226994,47227181,47227379,47228567,47228731	47219105,47223759,47224518,47224743,47224890,47225102,47225866,47226402,47226703,47226909,47227099,47227223,47227469,47228644,47229997	Gene ID= ENSG00000102225.15 TPM= 7.69 Transcript Type= NA
chrX	47218688	47229997	47218688	47229997	+	ENST00000357227.8@CDK16	ENST00000357227.8	protein_coding	47218688,47223552,47224385,47224618,47224834,47224988,47225772,47225965,47226279,47226583,47226812,47226994,47227181,47227379,47228567,47228731	47219105,47223759,47224518,47224743,47224890,47225102,47225866,47226027,47226402,47226703,47226909,47227099,47227223,47227469,47228644,47229997	Gene ID= ENSG00000102225.15 TPM= 56.35 Transcript Type= protein_coding
chrX	47232690	47248328	47232690	47248328	+	ENST00000377107.6@USP11	ENST00000377107.6	protein_coding	47232690,47239070,47239351,47239790,47240305,47240587,47240774,47241277,47241541,47242082,47242439,47242626,47243396,47244498,47244682,47245016,47245370,47247072,47247304,47247611,47247793	47233219,47239179,47239481,47239907,47240450,47240648,47240876,47241450,47241699,47242306,47242522,47242720,47243602,47244550,47244924,47245086,47245482,47247221,47247419,47247699,47248328	Gene ID= ENSG00000102226.9 TPM= 51.76 Transcript Type= protein_coding
chrX	47233410	47248328	47233410	47248328	+	transcript909.chrX.nic@USP11	transcript909.chrX.nic	protein_coding	47233410,47239070,47239351,47239790,47240305,47240587,47240774,47241277,47241541,47242082,47242439,47242626,47243396,47244498,47244682,47245016,47245370,47247072,47247304,47247611,47247793	47233533,47239179,47239481,47239907,47240450,47240648,47240876,47241450,47241699,47242306,47242522,47242720,47243602,47244550,47244924,47245086,47245482,47247221,47247419,47247699,47248328	Gene ID= ENSG00000102226.9 TPM= 18.48 Transcript Type= NA
chrX	47561117	47571900	47561117	47571900	+	ENST00000377045.8@ARAF	ENST00000377045.8	protein_coding	47561117,47562909,47563226,47564797,47564985,47565252,47566639,47566884,47566986,47567230,47568718,47568987,47569539,47569893,47570878,47571323	47561251,47563063,47563329,47564899,47565139,47565350,47566780,47566911,47567131,47567432,47568894,47569033,47569657,47570024,47571012,47571900	Gene ID= ENSG00000078061.12 TPM= 120.26 Transcript Type= protein_coding
chrX	47561183	47565975	47561183	47565975	+	transcript938.chrX.nic@ARAF	transcript938.chrX.nic	protein_coding	47561183,47562909,47563226,47564797,47564985	47561251,47563063,47563329,47564899,47565975	Gene ID= ENSG00000078061.12 TPM= 3.5 Transcript Type= NA
chrX	47582313	47586789	47582313	47586789	+	ENST00000218388.8@TIMP1	ENST00000218388.8	protein_coding	47582313,47583408,47584936,47585205,47585543,47586521	47582474,47583536,47585015,47585331,47585667,47586789	Gene ID= ENSG00000102265.11 TPM= 231.18 Transcript Type= protein_coding
chrX	47624214	47629965	47624214	47629965	-	ENST00000396992.7@CFP	ENST00000396992.7	protein_coding	47629769,47629524,47628102,47627471,47627141,47626773,47626328,47626058,47624214	47629965,47629674,47628277,47627641,47627332,47626946,47626519,47626169,47624440	Gene ID= ENSG00000126759.13 TPM= 38.53 Transcript Type= protein_coding
chrX	47651798	47659161	47651798	47659161	-	ENST00000333119.7@UXT	ENST00000333119.7	protein_coding	47659115,47658830,47657782,47657572,47657183,47652081,47651798	47659161,47658936,47657863,47657639,47657290,47652144,47651895	Gene ID= ENSG00000126756.11 TPM= 28.02 Transcript Type= protein_coding
chrX	47651805	47659117	47651805	47659117	-	ENST00000335890.2@UXT	ENST00000335890.2	protein_coding	47658830,47657782,47657572,47657183,47652081,47651805	47659117,47657863,47657639,47657290,47652144,47651895	Gene ID= ENSG00000126756.11 TPM= 2.34 Transcript Type= protein_coding
chrX	47974852	48003978	47974852	48003978	-	ENST00000396965.5@ZNF182	ENST00000396965.5	protein_coding	48003904,48003508,48002595,47988524,47983285,47982949,47974852	48003978,48003702,48002653,47988617,47983411,47983038,47977797	Gene ID= ENSG00000147118.11 TPM= 1.75 Transcript Type= protein_coding
chrX	47974851	48003955	47974851	48003955	-	ENST00000376943.7@ZNF182	ENST00000376943.7	protein_coding	48003909,48003508,48002595,47983285,47982949,47974851	48003955,48003702,48002653,47983411,47983038,47977797	Gene ID= ENSG00000147118.11 TPM= 4.09 Transcript Type= protein_coding
chrX	48058180	48071658	48058180	48071658	-	ENST00000442455.7@ZNF630	ENST00000442455.7	protein_coding	48071267,48066872,48060819,48060450,48058180	48071658,48067061,48060945,48060545,48060203	Gene ID= ENSG00000221994.10 TPM= 2.34 Transcript Type= protein_coding
chrX	48458539	48468354	48458539	48468354	-	transcript969.chrX.nic@SLC38A5	transcript969.chrX.nic	protein_coding	48468305,48467872,48467710,48466962,48466799,48466230,48466015,48462898,48462233,48462007,48461718,48460986,48460649,48459732,48459536,48458539	48468354,48467925,48467785,48467077,48466872,48466322,48466093,48462980,48462291,48462144,48461797,48461086,48460764,48459876,48459639,48459034	Gene ID= ENSG00000017483.14 TPM= 5.25 Transcript Type= NA
chrX	48458537	48470177	48458537	48470177	-	ENST00000595796.5@SLC38A5	ENST00000595796.5	protein_coding	48469335,48467872,48467710,48466962,48466799,48466230,48466015,48462898,48462233,48462007,48461718,48460986,48460649,48459732,48459536,48458537	48470177,48467925,48467785,48467077,48466872,48466322,48466093,48462980,48462291,48462144,48461797,48461086,48460764,48459876,48459639,48459034	Gene ID= ENSG00000017483.14 TPM= 10.51 Transcript Type= protein_coding
chrX	48458539	48467493	48458539	48467493	-	ENST00000619100.4@SLC38A5	ENST00000619100.4	protein_coding	48466962,48466799,48466230,48466015,48462898,48462233,48462007,48461718,48460986,48460649,48459732,48459536,48458539	48467493,48466872,48466322,48466093,48462980,48462291,48462144,48461797,48461086,48460764,48459876,48459639,48459034	Gene ID= ENSG00000017483.14 TPM= 11.09 Transcript Type= protein_coding
chrX	48476129	48486299	48476129	48486299	+	transcript975.chrX.nic@FTSJ1	transcript975.chrX.nic	protein_coding	48476129,48477961,48478449,48478617,48479038,48481151,48481289,48481426,48481632,48482409,48482597,48482986,48485736	48476396,48478168,48478518,48478707,48479116,48481203,48481342,48481528,48481715,48482506,48482794,48483027,48486299	Gene ID= ENSG00000068438.14 TPM= 9.34 Transcript Type= NA
chrX	48476199	48486299	48476199	48486299	+	transcript978.chrX.nic@FTSJ1	transcript978.chrX.nic	protein_coding	48476199,48477961,48478449,48478617,48479038,48481151,48481289,48481426,48481632,48482403,48482597,48485736	48476396,48478168,48478518,48478707,48479116,48481203,48481342,48481528,48481715,48482506,48483027,48486299	Gene ID= ENSG00000068438.14 TPM= 2.34 Transcript Type= NA
chrX	48476161	48486305	48476161	48486305	+	ENST00000348411.2@FTSJ1	ENST00000348411.2	protein_coding	48476161,48477961,48478449,48478617,48479038,48481151,48481289,48481426,48481632,48482403,48482597,48482986,48485736	48476396,48478168,48478518,48478707,48479116,48481203,48481342,48481528,48481715,48482506,48482794,48483027,48486305	Gene ID= ENSG00000068438.14 TPM= 23.35 Transcript Type= protein_coding
chrX	48508943	48520808	48508943	48520808	+	transcript996.chrX.nic@PORCN	transcript996.chrX.nic	protein_coding	48508943,48509784,48511366,48511892,48512326,48512589,48514240,48514525,48515717,48515890,48516061,48517183,48520375	48509103,48509956,48511487,48511935,48512507,48512719,48514365,48514625,48515793,48515953,48516146,48517293,48520808	Gene ID= ENSG00000102312.21 TPM= 7.39 Transcript Type= NA
chrX	48508962	48520806	48508962	48520806	+	ENST00000359882.8@PORCN	ENST00000359882.8	protein_coding	48508962,48509784,48511295,48511892,48512326,48512589,48514127,48514240,48514525,48515717,48515890,48516061,48517183,48520375	48509103,48509956,48511487,48511935,48512507,48512719,48514141,48514365,48514625,48515793,48515953,48516146,48517293,48520806	Gene ID= ENSG00000102312.21 TPM= 5.84 Transcript Type= protein_coding
chrX	48509002	48520814	48509002	48520814	+	ENST00000355961.8@PORCN	ENST00000355961.8	protein_coding	48509002,48509784,48511295,48511892,48512326,48512589,48512835,48514240,48514525,48515717,48515890,48516061,48517183,48520375	48509103,48509956,48511487,48511935,48512507,48512719,48512852,48514365,48514625,48515793,48515953,48516146,48517293,48520814	Gene ID= ENSG00000102312.21 TPM= 10.31 Transcript Type= protein_coding
chrX	48521158	48528716	48521158	48528716	+	ENST00000495186.5@EBP	ENST00000495186.5	protein_coding	48521158,48523699,48526989,48527155,48528234	48521907,48524072,48527025,48527285,48528716	Gene ID= ENSG00000147155.10 TPM= 53.13 Transcript Type= protein_coding
chrX	48521799	48528710	48521799	48528710	+	ENST00000276096.10@EBP	ENST00000276096.10	protein_coding	48521799,48523923,48526989,48527155,48528234	48521907,48524072,48527025,48527285,48528710	Gene ID= ENSG00000147155.10 TPM= 8.17 Transcript Type= processed_transcript
chrX	48539457	48562609	48539457	48562609	+	ENST00000376771.8@TBC1D25	ENST00000376771.8	protein_coding	48539457,48541333,48544869,48558897,48559158,48559614	48539920,48541442,48545023,48559024,48559346,48562609	Gene ID= ENSG00000068354.15 TPM= 20.63 Transcript Type= protein_coding
chrX	48574448	48578284	48574448	48578284	+	transcript1044.chrX.nic@RBM3	transcript1044.chrX.nic	protein_coding	48574448,48575168,48575561,48576508,48577026,48577465	48574573,48575283,48576419,48576604,48577109,48578284	Gene ID= ENSG00000102317.17 TPM= 9.92 Transcript Type= NA
chrX	48597438	48605193	48597438	48605193	+	transcript1005.chrX.nic@WDR13	transcript1005.chrX.nic	protein_coding	48597438,48597958,48598751,48599353,48599587,48600319,48601784,48602065,48604272,48604848	48597614,48598037,48598957,48599462,48599717,48600626,48601964,48602206,48604390,48605193	Gene ID= ENSG00000101940.17 TPM= 12.73 Transcript Type= NA
chrX	48597492	48605193	48597492	48605193	+	transcript1015.chrX.nic@WDR13	transcript1015.chrX.nic	protein_coding	48597492,48598751,48599353,48599587,48600319,48601784,48602065,48604272,48604848	48598037,48598957,48599462,48599717,48600626,48601964,48602206,48604390,48605193	Gene ID= ENSG00000101940.17 TPM= 11.56 Transcript Type= NA
chrX	48597492	48605193	48597492	48605193	+	ENST00000218056.9@WDR13	ENST00000218056.9	protein_coding	48597492,48598717,48599353,48599587,48600319,48601784,48602065,48604272,48604848	48598037,48598957,48599462,48599717,48600626,48601964,48602206,48604390,48605193	Gene ID= ENSG00000101940.17 TPM= 61.57 Transcript Type= protein_coding
chrX	48597809	48605193	48597809	48605193	+	ENST00000479279.5@WDR13	ENST00000479279.5	protein_coding	48597809,48599353,48599587,48600319,48601784,48602065,48604272,48604848	48598957,48599462,48599717,48600626,48601964,48602206,48604390,48605193	Gene ID= ENSG00000101940.17 TPM= 6.69 Transcript Type= retained_intron
chrX	48683779	48691427	48683779	48691427	+	ENST00000376701.4@WAS	ENST00000376701.4	protein_coding	48683779,48684283,48685547,48685734,48685946,48686081,48686781,48688054,48688300,48688660,48689320,48691107	48683985,48684423,48685633,48685836,48685987,48686134,48686955,48688096,48688453,48689066,48689434,48691427	Gene ID= ENSG00000015285.10 TPM= 16.35 Transcript Type= protein_coding
chrX	48786554	48794308	48786554	48794308	+	ENST00000376670.7@GATA1	ENST00000376670.7	protein_coding	48786554,48791091,48791844,48792323,48793172,48793793	48786645,48791329,48792221,48792468,48793297,48794308	Gene ID= ENSG00000102145.13 TPM= 1.17 Transcript Type= protein_coding
chrX	48801995	48824976	48801995	48824976	+	ENST00000334136.9@HDAC6	ENST00000334136.9	protein_coding	48801995,48802663,48802871,48803128,48805438,48805631,48806368,48806609,48808033,48808258,48814440,48814675,48814834,48814962,48815384,48815575,48815884,48816141,48816465,48817326,48818041,48818220,48820106,48822620,48822912,48823672,48823922,48824166,48824544	48802142,48802785,48802999,48803216,48805522,48805671,48806464,48806706,48808137,48808326,48814566,48814740,48814893,48815051,48815490,48815642,48816052,48816269,48816633,48817459,48818109,48818412,48820255,48822794,48823588,48823785,48824068,48824294,48824976	Gene ID= ENSG00000094631.18 TPM= 25.41 Transcript Type= protein_coding
chrX	48802120	48824976	48802120	48824976	+	transcript1075.chrX.nic@HDAC6	transcript1075.chrX.nic	protein_coding	48802120,48802663,48802871,48803128,48805438,48805631,48806368,48806609,48808033,48808258,48814440,48814675,48814834,48814962,48815384,48815575,48815884,48816141,48816465,48817326,48818041,48818220,48820106,48822620,48822912,48823672,48823922,48824166,48824544	48802272,48802785,48802999,48803216,48805522,48805671,48806464,48806706,48808137,48808326,48814566,48814740,48814893,48815051,48815490,48815642,48816052,48816269,48816633,48817459,48818109,48818412,48820255,48822794,48823588,48823785,48824068,48824294,48824976	Gene ID= ENSG00000094631.18 TPM= 19.57 Transcript Type= NA
chrX	48802158	48824976	48802158	48824976	+	transcript1076.chrX.nic@HDAC6	transcript1076.chrX.nic	protein_coding	48802158,48802663,48802871,48803128,48805438,48805631,48806368,48806609,48808033,48808258,48814440,48814675,48814834,48814962,48815384,48815575,48815884,48816141,48816465,48817326,48818041,48818220,48820106,48822620,48822912,48823672,48823922,48824166,48824544	48802235,48802785,48802999,48803216,48805522,48805671,48806464,48806706,48808137,48808326,48814566,48814740,48814893,48815051,48815490,48815642,48816052,48816269,48816633,48817459,48818109,48818412,48820255,48822794,48823588,48823785,48824068,48824294,48824976	Gene ID= ENSG00000094631.18 TPM= 19.57 Transcript Type= NA
chrX	48802158	48824976	48802158	48824976	+	transcript1081.chrX.nic@HDAC6	transcript1081.chrX.nic	protein_coding	48802158,48802663,48802871,48803128,48805438,48805631,48806368,48806609,48808033,48808258,48814440,48814675,48814834,48814962,48815575,48815884,48816141,48816465,48817326,48818041,48818220,48820106,48822620,48822912,48823672,48823922,48824166,48824544	48802235,48802785,48802999,48803216,48805522,48805671,48806464,48806706,48808137,48808326,48814566,48814740,48814893,48815490,48815642,48816052,48816269,48816633,48817459,48818109,48818412,48820255,48822794,48823588,48823785,48824068,48824294,48824976	Gene ID= ENSG00000094631.18 TPM= 7.8 Transcript Type= NA
chrX	48802120	48824976	48802120	48824976	+	transcript1085.chrX.nic@HDAC6	transcript1085.chrX.nic	protein_coding	48802120,48802663,48802871,48803128,48805438,48805631,48806368,48806609,48808033,48808258,48814440,48814675,48814962,48815575,48815884,48816141,48816465,48817326,48818041,48818220,48820106,48822620,48822912,48823672,48823922,48824166,48824544	48802272,48802785,48802999,48803216,48805522,48805671,48806464,48806706,48808137,48808326,48814566,48814893,48815490,48815642,48816052,48816269,48816633,48817459,48818109,48818412,48820255,48822794,48823588,48823785,48824068,48824294,48824976	Gene ID= ENSG00000094631.18 TPM= 8.18 Transcript Type= NA
chrX	48802158	48824976	48802158	48824976	+	transcript1087.chrX.nic@HDAC6	transcript1087.chrX.nic	protein_coding	48802158,48802663,48802871,48803128,48805438,48805631,48806368,48806609,48808033,48808258,48814440,48814675,48814962,48815575,48815884,48816141,48816465,48817326,48818041,48818220,48820106,48822620,48822912,48823672,48823922,48824166,48824544	48802235,48802785,48802999,48803216,48805522,48805671,48806464,48806706,48808137,48808326,48814566,48814893,48815490,48815642,48816052,48816269,48816633,48817459,48818109,48818412,48820255,48822794,48823588,48823785,48824068,48824294,48824976	Gene ID= ENSG00000094631.18 TPM= 7.02 Transcript Type= NA
chrX	48831094	48835633	48831094	48835633	-	ENST00000218230.5@PCSK1N	ENST00000218230.5	protein_coding	48835419,48831869,48831094	48835633,48832341,48831455	Gene ID= ENSG00000102109.8 TPM= 15.18 Transcript Type= protein_coding
chrX	48893448	48898143	48893448	48898143	-	ENST00000396779.7@TIMM17B	ENST00000396779.7	protein_coding	48898067,48897724,48896759,48895352,48895038,48894097,48893900,48893448	48898143,48897821,48896858,48895501,48895101,48894225,48894010,48893817	Gene ID= ENSG00000126768.12 TPM= 8.76 Transcript Type= protein_coding
chrX	48893447	48898143	48893447	48898143	-	ENST00000376582.7@TIMM17B	ENST00000376582.7	protein_coding	48898067,48897724,48896759,48895038,48894097,48893900,48893447	48898143,48897821,48896858,48895101,48894225,48894010,48893817	Gene ID= ENSG00000126768.12 TPM= 29.77 Transcript Type= protein_coding
chrX	48897912	48903142	48897912	48903142	+	ENST00000376563.5@PQBP1	ENST00000376563.5	protein_coding	48897912,48898492,48901190,48901930,48902233,48902732,48902928	48898093,48898576,48901301,48902042,48902517,48902795,48903142	Gene ID= ENSG00000102103.15 TPM= 8.17 Transcript Type= protein_coding
chrX	48897928	48903143	48897928	48903143	+	transcript1098.chrX.nic@PQBP1	transcript1098.chrX.nic	protein_coding	48897928,48898492,48901190,48901930,48902233,48902928	48898082,48898576,48901301,48902042,48902795,48903143	Gene ID= ENSG00000102103.15 TPM= 2.34 Transcript Type= NA
chrX	48897952	48903143	48897952	48903143	+	ENST00000477997.5@PQBP1	ENST00000477997.5	protein_coding	48897952,48898492,48901190,48901930,48902233,48902732,48902928	48898014,48898576,48901301,48902042,48902517,48902795,48903143	Gene ID= ENSG00000102103.15 TPM= 1.17 Transcript Type= processed_transcript
chrX	48897996	48903098	48897996	48903098	+	ENST00000470062.5@PQBP1	ENST00000470062.5	protein_coding	48897996,48898492,48901190,48901930,48902233,48902732,48902928	48898082,48898576,48901301,48902042,48902384,48902795,48903098	Gene ID= ENSG00000102103.15 TPM= 1.17 Transcript Type= processed_transcript
chrX	48898041	48903143	48898041	48903143	+	ENST00000474671.5@PQBP1	ENST00000474671.5	protein_coding	48898041,48898492,48901190,48901930,48902233,48902732,48902928	48898082,48898576,48901301,48902042,48902517,48902795,48903143	Gene ID= ENSG00000102103.15 TPM= 12.84 Transcript Type= processed_transcript
chrX	48903184	48911958	48903184	48911958	-	ENST00000376521.6@SLC35A2	ENST00000376521.6	protein_coding	48911546,48909814,48906392,48903184	48911958,48909996,48906543,48905482	Gene ID= ENSG00000102100.15 TPM= 32.69 Transcript Type= protein_coding
chrX	48903184	48911646	48903184	48911646	-	ENST00000376529.8@SLC35A2	ENST00000376529.8	protein_coding	48911546,48909814,48906392,48904746,48903184	48911646,48909996,48906543,48904892,48903465	Gene ID= ENSG00000102100.15 TPM= 2.34 Transcript Type= protein_coding
chrX	48903613	48911669	48903613	48911669	-	ENST00000445167.7@SLC35A2	ENST00000445167.7	protein_coding	48911546,48909814,48906392,48903613	48911669,48909996,48906543,48904892	Gene ID= ENSG00000102100.15 TPM= 9.34 Transcript Type= protein_coding
chrX	48913182	48919024	48913182	48919024	-	ENST00000376509.4@PIM2	ENST00000376509.4	protein_coding	48918774,48918536,48917781,48915020,48914395,48913182	48919024,48918645,48917831,48915392,48914571,48914294	Gene ID= ENSG00000102096.9 TPM= 22.18 Transcript Type= protein_coding
chrX	48922212	48957599	48922212	48957599	-	ENST00000376488.7@OTUD5	ENST00000376488.7	protein_coding	48956977,48944190,48934954,48934711,48934464,48925847,48923851,48923633,48922212	48957599,48944283,48935018,48934867,48934612,48926050,48924052,48923746,48923295	Gene ID= ENSG00000068308.13 TPM= 28.61 Transcript Type= protein_coding
chrX	48922211	48957631	48922211	48957631	-	ENST00000156084.8@OTUD5	ENST00000156084.8	protein_coding	48956977,48944190,48934954,48934696,48934464,48925847,48923851,48923633,48922211	48957631,48944283,48935018,48934867,48934612,48926050,48924052,48923746,48923295	Gene ID= ENSG00000068308.13 TPM= 7.59 Transcript Type= protein_coding
chrX	48922640	48957894	48922640	48957894	-	ENST00000610466.4@OTUD5	ENST00000610466.4	protein_coding	48957521,48957473,48956977,48944190,48934954,48934711,48934464,48925847,48923851,48923633,48922640	48957894,48957480,48957440,48944283,48935018,48934867,48934612,48926050,48924052,48923746,48923295	Gene ID= ENSG00000068308.13 TPM= 16.35 Transcript Type= protein_coding
chrX	48926801	48928842	48926801	48928842	+	transcript1129.chrX.nnic@NA	transcript1129.chrX.nnic	NA	48926801	48928842	Gene ID= novel_gene_chrX_1130 TPM= 8.17 Transcript Type= NA
chrX	48973723	49002264	48973723	49002264	-	ENST00000376423.8@GRIPAP1	ENST00000376423.8	protein_coding	49002188,48999438,48999238,48998154,48997250,48993428,48990926,48990685,48989972,48989835,48989611,48988121,48987785,48985268,48983775,48983228,48982979,48981795,48981596,48981416,48981215,48978305,48976241,48976018,48975155,48973723	49002264,48999504,48999299,48998180,48997357,48993578,48991110,48990732,48990003,48989882,48989710,48988198,48987877,48985402,48983870,48983440,48983092,48981872,48981691,48981472,48981314,48978435,48976363,48976111,48975309,48974285	Gene ID= ENSG00000068400.13 TPM= 111.06 Transcript Type= protein_coding
chrX	48973723	49002264	48973723	49002264	-	transcript1150.chrX.nic@GRIPAP1	transcript1150.chrX.nic	protein_coding	49002188,48999438,48999238,48998154,48997250,48993428,48990926,48990685,48989972,48989835,48989611,48988121,48987785,48985268,48983775,48983228,48982979,48981795,48981596,48981416,48981215,48978305,48976018,48975155,48973723	49002264,48999504,48999299,48998180,48997357,48993578,48991110,48990732,48990003,48989882,48989710,48988198,48987877,48985402,48983870,48983440,48983092,48981872,48981691,48981472,48981314,48978435,48976363,48975309,48974285	Gene ID= ENSG00000068400.13 TPM= 4.81 Transcript Type= NA
chrX	48973723	49002264	48973723	49002264	-	transcript1152.chrX.nic@GRIPAP1	transcript1152.chrX.nic	protein_coding	49002188,48999438,48999238,48998154,48997250,48993428,48990926,48990685,48989972,48989835,48989611,48988121,48987785,48985268,48983775,48983228,48982979,48981795,48981596,48981416,48981215,48978305,48976241,48975155,48973723	49002264,48999504,48999299,48998180,48997357,48993578,48991110,48990732,48990003,48989882,48989710,48988198,48987877,48985402,48983870,48983440,48983092,48981872,48981691,48981472,48981314,48978435,48976363,48976111,48974285	Gene ID= ENSG00000068400.13 TPM= 11.82 Transcript Type= NA
chrX	48973723	49002264	48973723	49002264	-	transcript1157.chrX.nic@GRIPAP1	transcript1157.chrX.nic	protein_coding	49002188,48999438,48999238,48998154,48997250,48993428,48990926,48990685,48989972,48989835,48989611,48988121,48987785,48985268,48983775,48983228,48982979,48981795,48981596,48981416,48981215,48978305,48975155,48973723	49002264,48999504,48999299,48998180,48997357,48993578,48991110,48990732,48990003,48989882,48989710,48988198,48987877,48985402,48983870,48983440,48983092,48981872,48981691,48981472,48981314,48978435,48976363,48974285	Gene ID= ENSG00000068400.13 TPM= 7.15 Transcript Type= NA
chrX	48973723	49002234	48973723	49002234	-	ENST00000593475.5@GRIPAP1	ENST00000593475.5	protein_coding	49002188,48999438,48999238,48998154,48997250,48993428,48990926,48990685,48989972,48989835,48989611,48988121,48985268,48983775,48983228,48982979,48981795,48981596,48981416,48981215,48978305,48976241,48976018,48975155,48973723	49002234,48999504,48999299,48998180,48997357,48993578,48991110,48990732,48990003,48989882,48989710,48988198,48985402,48983870,48983440,48983092,48981872,48981691,48981472,48981314,48978435,48976363,48976111,48975309,48974285	Gene ID= ENSG00000068400.13 TPM= 2.48 Transcript Type= protein_coding
chrX	49028731	49043362	49028731	49043362	-	transcript1169.chrX.nnic@TFE3	transcript1169.chrX.nnic	protein_coding	49043111,49040455,49039107,49038197,49038010,49034134,49033726,49033465,49031397,49028731	49043362,49040568,49039391,49038442,49038114,49034251,49033782,49033540,49031544,49030601	Gene ID= ENSG00000068323.16 TPM= 20.05 Transcript Type= NA
chrX	49028726	49043410	49028726	49043410	-	ENST00000493583.5@TFE3	ENST00000493583.5	protein_coding	49043111,49040455,49039107,49038197,49038010,49034134,49033726,49033465,49031397,49028726	49043410,49040568,49039345,49038442,49038114,49034251,49033782,49033540,49031544,49030601	Gene ID= ENSG00000068323.16 TPM= 52.74 Transcript Type= nonsense_mediated_decay
chrX	49028731	49043486	49028731	49043486	-	ENST00000315869.7@TFE3	ENST00000315869.7	protein_coding	49043111,49040455,49039107,49038197,49038010,49034134,49033726,49033465,49031397,49028731	49043486,49040568,49039410,49038442,49038114,49034251,49033782,49033540,49031544,49030601	Gene ID= ENSG00000068323.16 TPM= 91.27 Transcript Type= protein_coding
chrX	49071156	49074071	49071156	49074071	-	ENST00000553851.2@PRAF2	ENST00000553851.2	protein_coding	49073809,49072433,49071156	49074071,49072650,49072008	Gene ID= ENSG00000243279.3 TPM= 29.19 Transcript Type= protein_coding
chrX	49074429	49079915	49074429	49079915	-	ENST00000376372.8@WDR45	ENST00000376372.8	protein_coding	49079751,49078041,49077837,49077643,49076645,49076430,49075866,49075545,49075364,49075136,49074429	49079915,49078112,49077911,49077747,49076750,49076524,49075945,49075753,49075465,49075281,49074912	Gene ID= ENSG00000196998.17 TPM= 18.68 Transcript Type= protein_coding
chrX	49074640	49079860	49074640	49079860	-	transcript1179.chrX.nic@WDR45	transcript1179.chrX.nic	protein_coding	49079751,49078041,49077837,49077643,49076645,49076430,49075866,49075545,49075364,49075136,49074640	49079860,49078112,49077911,49077747,49076750,49076524,49075945,49075663,49075465,49075281,49074912	Gene ID= ENSG00000196998.17 TPM= 2.34 Transcript Type= NA
chrX	49074442	49079915	49074442	49079915	-	transcript1190.chrX.nic@WDR45	transcript1190.chrX.nic	protein_coding	49079751,49078041,49076645,49076430,49075866,49075545,49075364,49075136,49074442	49079915,49078112,49077911,49076524,49075945,49075753,49075465,49075281,49074912	Gene ID= ENSG00000196998.17 TPM= 5.84 Transcript Type= NA
chrX	49077653	49101170	49077653	49101170	-	ENST00000634671.1@WDR45	ENST00000634671.1	protein_coding	49101050,49100205,49079939,49078041,49077885,49077653	49101170,49100554,49080095,49078112,49077911,49077747	Gene ID= ENSG00000196998.17 TPM= 1.17 Transcript Type= protein_coding
chrX	49074640	49079898	49074640	49079898	-	ENST00000322995.13@WDR45	ENST00000322995.13	protein_coding	49079751,49078041,49077837,49077643,49076645,49076430,49075866,49075545,49075364,49075136,49074640	49079898,49078112,49077911,49077747,49076750,49076524,49075978,49075753,49075465,49075281,49074912	Gene ID= ENSG00000196998.17 TPM= 2.34 Transcript Type= protein_coding
chrX	49113389	49123801	49113389	49123801	-	ENST00000156109.6@GPKOW	ENST00000156109.6	protein_coding	49123547,49122622,49122398,49119705,49117597,49117030,49116221,49115891,49115726,49113853,49113389	49123801,49122776,49122522,49119814,49117810,49117162,49116323,49116014,49115795,49113938,49113755	Gene ID= ENSG00000068394.10 TPM= 35.03 Transcript Type= protein_coding
chrX	49162760	49166632	49162760	49166632	+	transcript1206.chrX.nic@MAGIX	transcript1206.chrX.nic	protein_coding	49162760,49163783,49164707,49164863,49165190,49166089	49162938,49163929,49164789,49165090,49165361,49166632	Gene ID= ENSG00000269313.5 TPM= 3.5 Transcript Type= NA
chrX	49162860	49166632	49162860	49166632	+	transcript1208.chrX.nic@MAGIX	transcript1208.chrX.nic	protein_coding	49162860,49163783,49164707,49164908,49165190,49166089	49162938,49163929,49164789,49165090,49165361,49166632	Gene ID= ENSG00000269313.5 TPM= 2.34 Transcript Type= NA
chrX	49162760	49166632	49162760	49166632	+	transcript1213.chrX.nic@MAGIX	transcript1213.chrX.nic	protein_coding	49162760,49163783,49164707,49165190	49162938,49163929,49165090,49166632	Gene ID= ENSG00000269313.5 TPM= 2.34 Transcript Type= NA
chrX	49162843	49166632	49162843	49166632	+	ENST00000615626.4@MAGIX	ENST00000615626.4	protein_coding	49162843,49163783,49164707,49165190,49166074	49162938,49163929,49164789,49165361,49166632	Gene ID= ENSG00000269313.5 TPM= 2.34 Transcript Type= protein_coding
chrX	49175552	49186400	49175552	49186400	-	transcript1218.chrX.nnic@PRICKLE3	transcript1218.chrX.nnic	protein_coding	49186256,49184625,49183734,49179693,49179251,49178272,49177993,49175552	49186400,49184710,49183917,49179806,49179388,49178475,49178179,49176265	Gene ID= ENSG00000012211.12 TPM= 2.34 Transcript Type= NA
chrX	49175554	49186392	49175554	49186392	-	ENST00000599218.5@PRICKLE3	ENST00000599218.5	protein_coding	49186256,49184625,49183734,49179693,49179251,49178272,49177993,49176903,49175554	49186392,49184710,49183917,49179806,49179388,49178475,49178179,49177202,49176265	Gene ID= ENSG00000012211.12 TPM= 5.84 Transcript Type= protein_coding
chrX	49187804	49200259	49187804	49200259	-	ENST00000263233.8@SYP	ENST00000263233.8	protein_coding	49200151,49198968,49197715,49194166,49193272,49191433,49187804	49200259,49199033,49197839,49194361,49193463,49191763,49189282	Gene ID= ENSG00000102003.10 TPM= 10.51 Transcript Type= protein_coding
chrX	49235467	49250526	49235467	49250526	+	ENST00000376227.3@CCDC22	ENST00000376227.3	protein_coding	49235467,49237086,49242016,49242886,49243118,49243284,49246731,49247496,49247649,49248191,49248407,49248633,49248817,49249167,49249509,49249651,49250148	49235686,49237263,49242148,49242992,49243184,49243462,49246925,49247558,49247768,49248310,49248523,49248734,49248924,49249262,49249568,49249725,49250526	Gene ID= ENSG00000101997.12 TPM= 61.88 Transcript Type= protein_coding
chrX	49269785	49301467	49269785	49301467	+	transcript1237.chrX.nnic@PPP1R3F	transcript1237.chrX.nnic	protein_coding	49269785,49281406,49281981,49285834,49299276,49301351	49270873,49281461,49282063,49286077,49299435,49301467	Gene ID= ENSG00000049769.12 TPM= 3.5 Transcript Type= NA
chrX	49269785	49301467	49269785	49301467	+	transcript1239.chrX.nnic@PPP1R3F	transcript1239.chrX.nnic	protein_coding	49269785,49281406,49281981,49299276,49301351	49270873,49281461,49282063,49299435,49301467	Gene ID= ENSG00000049769.12 TPM= 8.17 Transcript Type= NA
chrX	49269785	49288095	49269785	49288095	+	transcript1244.chrX.nic@PPP1R3F	transcript1244.chrX.nic	protein_coding	49269785,49281406,49281984,49285834	49270873,49281461,49282063,49288095	Gene ID= ENSG00000049769.12 TPM= 4.67 Transcript Type= NA
chrX	49269854	49288095	49269854	49288095	+	ENST00000055335.10@PPP1R3F	ENST00000055335.10	protein_coding	49269854,49281406,49281981,49285834	49270873,49281461,49282063,49288095	Gene ID= ENSG00000049769.12 TPM= 7.01 Transcript Type= protein_coding
chrX	49269805	49275771	49269805	49275771	+	transcript1246.chrX.nnic@NA	transcript1246.chrX.nnic	NA	49269805	49275771	Gene ID= novel_gene_chrX_1247 TPM= 4.67 Transcript Type= NA
chrX	49876324	49879439	49876324	49879439	-	transcript1249.chrX.nnic@NA	transcript1249.chrX.nnic	NA	49876324	49879439	Gene ID= novel_gene_chrX_1250 TPM= 3.5 Transcript Type= NA
chrX	49922665	50092482	49922665	50092482	+	ENST00000376091.7@CLCN5	ENST00000376091.7	protein_coding	49922665,49923407,49925171,50042316,50069879,50072489,50075795,50080594,50081641,50085980,50086328,50088698,50090116,50090670,50092129	49922792,49923482,49925314,50042462,50070030,50072588,50075982,50080716,50081847,50086060,50086870,50088884,50090514,50090886,50092482	Gene ID= ENSG00000171365.15 TPM= 4.67 Transcript Type= protein_coding
chrX	50591647	50814302	50591647	50814302	-	ENST00000289292.11@SHROOM4	ENST00000289292.11	protein_coding	50813902,50695786,50638174,50633178,50627614,50607381,50602633,50598266,50595698,50591647	50814302,50695937,50638308,50635668,50627675,50608184,50602813,50598535,50596964,50592144	Gene ID= ENSG00000158352.15 TPM= 4.67 Transcript Type= protein_coding
chrX	50631933	50643703	50631933	50643703	-	transcript1262.chrX.nic@SHROOM4	transcript1262.chrX.nic	protein_coding	50643308,50638174,50631933	50643703,50638308,50635668	Gene ID= ENSG00000158352.15 TPM= 3.5 Transcript Type= NA
chrX	50694544	50814147	50694544	50814147	-	transcript1264.chrX.nic@SHROOM4	transcript1264.chrX.nic	protein_coding	50813902,50694544	50814147,50695937	Gene ID= ENSG00000158352.15 TPM= 2.34 Transcript Type= NA
chrX	50591720	50593536	50591720	50593536	-	transcript1265.chrX.nnic@NA	transcript1265.chrX.nnic	NA	50591720	50593536	Gene ID= novel_gene_chrX_1266 TPM= 3.5 Transcript Type= NA
chrX	51332830	51337525	51332830	51337525	+	ENST00000356450.2@NUDT10	ENST00000356450.2	protein_coding	51332830,51336239	51333459,51337525	Gene ID= ENSG00000122824.10 TPM= 1.17 Transcript Type= protein_coding
chrX	51743431	51746232	51743431	51746232	+	ENST00000340438.5@GSPT2	ENST00000340438.5	protein_coding	51743431	51746232	Gene ID= ENSG00000189369.8 TPM= 4.67 Transcript Type= protein_coding
chrX	51803007	51902354	51803007	51902354	+	ENST00000375772.7@MAGED1	ENST00000375772.7	protein_coding	51803007,51894269,51895053,51896409,51897208,51897547,51897795,51898114,51898285,51898581,51900182,51901553,51902146	51803117,51894349,51895760,51897077,51897271,51897626,51897886,51898193,51898327,51898643,51900296,51901938,51902354	Gene ID= ENSG00000179222.17 TPM= 10.18 Transcript Type= protein_coding
chrX	51893577	51902354	51893577	51902354	+	transcript1276.chrX.nic@MAGED1	transcript1276.chrX.nic	protein_coding	51893577,51894269,51895053,51896409,51897208,51897547,51897795,51898114,51898285,51898581,51900182,51901553	51893755,51894349,51895760,51897077,51897271,51897626,51897886,51898193,51898327,51898643,51900296,51902354	Gene ID= ENSG00000179222.17 TPM= 7.94 Transcript Type= NA
chrX	51893602	51902357	51893602	51902357	+	ENST00000326587.11@MAGED1	ENST00000326587.11	protein_coding	51893602,51894269,51895053,51896409,51897208,51897547,51897795,51898114,51898285,51898581,51900182,51901553,51902146	51893755,51894349,51895760,51897077,51897271,51897626,51897886,51898193,51898327,51898643,51900296,51901938,51902357	Gene ID= ENSG00000179222.17 TPM= 89.58 Transcript Type= protein_coding
chrX	52061827	52069248	52061827	52069248	-	ENST00000335504.9@MAGED4B	ENST00000335504.9	protein_coding	52069130,52067963,52066865,52066250,52066083,52065810,52065330,52064629,52064501,52064047,52062987,52062234,52061827	52069248,52068203,52067698,52066453,52066146,52065889,52065421,52064708,52064543,52064109,52063101,52062664,52062038	Gene ID= ENSG00000187243.16 TPM= 9.34 Transcript Type= protein_coding
chrX	52061827	52069182	52061827	52069182	-	ENST00000470594.5@MAGED4B	ENST00000470594.5	protein_coding	52069130,52067963,52066250,52066083,52065810,52065330,52064629,52064501,52064047,52062987,52062222,52061827	52069182,52068263,52067698,52066146,52065889,52065421,52064708,52064543,52064109,52063101,52062664,52062038	Gene ID= ENSG00000187243.16 TPM= 1.17 Transcript Type= retained_intron
chrX	52184847	52192268	52184847	52192268	+	ENST00000471932.5@MAGED4	ENST00000471932.5	protein_coding	52184847,52185892,52186397,52187642,52187949,52188206,52188674,52189387,52189552,52189986,52190994,52191431,52192057	52184965,52186132,52187230,52187845,52188012,52188285,52188765,52189466,52189594,52190048,52191108,52191861,52192268	Gene ID= ENSG00000154545.16 TPM= 6.42 Transcript Type= processed_transcript
chrX	52184912	52192268	52184912	52192268	+	ENST00000498483.5@MAGED4	ENST00000498483.5	protein_coding	52184912,52185922,52186397,52187642,52187949,52188206,52188674,52189387,52189552,52189986,52190994,52191431,52192057	52184965,52186132,52187230,52187845,52188012,52188285,52188765,52189466,52189594,52190048,52191108,52191861,52192268	Gene ID= ENSG00000154545.16 TPM= 2.92 Transcript Type= processed_transcript
chrX	52495877	52500812	52495877	52500812	+	ENST00000375595.8@XAGE1A	ENST00000375595.8	protein_coding	52495877,52497316,52497985,52500702	52496229,52497457,52498111,52500812	Gene ID= ENSG00000204379.10 TPM= 1.17 Transcript Type= processed_transcript
chrX	52898550	52908560	52898550	52908560	+	ENST00000416841.6@FAM156B	ENST00000416841.6	protein_coding	52898550,52900568,52907109	52899541,52900660,52908560	Gene ID= ENSG00000179304.16 TPM= 8.76 Transcript Type= protein_coding
chrX	52897400	52908556	52897400	52908556	+	ENST00000593751.7@FAM156B	ENST00000593751.7	protein_coding	52897400,52899468,52900568,52907109	52898726,52899541,52900660,52908556	Gene ID= ENSG00000179304.16 TPM= 12.26 Transcript Type= protein_coding
chrX	52947258	52958414	52947258	52958414	-	ENST00000596733.7@FAM156A	ENST00000596733.7	protein_coding	52957088,52956273,52955154,52947258	52958414,52956346,52955246,52948705	Gene ID= ENSG00000268350.7 TPM= 8.17 Transcript Type= protein_coding
chrX	52947254	52958484	52947254	52958484	-	ENST00000622447.4@FAM156A	ENST00000622447.4	protein_coding	52956273,52955154,52947254	52958484,52955246,52948705	Gene ID= ENSG00000268350.7 TPM= 31.53 Transcript Type= protein_coding
chrX	53082366	53088540	53082366	53088540	+	transcript1293.chrX.nnic@TSPYL2	transcript1293.chrX.nnic	protein_coding	53082366,53083068,53084545,53084755,53084954,53085227,53085631,53087776	53082563,53083305,53084622,53084866,53085099,53085321,53086310,53088540	Gene ID= ENSG00000184205.14 TPM= 5.84 Transcript Type= NA
chrX	53081939	53088540	53081939	53088540	+	transcript1295.chrX.nic@TSPYL2	transcript1295.chrX.nic	protein_coding	53081939,53084532,53084755,53084954,53085227,53085631,53087776	53083305,53084622,53084866,53085099,53085321,53086310,53088540	Gene ID= ENSG00000184205.14 TPM= 28.02 Transcript Type= NA
chrX	53082367	53088540	53082367	53088540	+	ENST00000375442.8@TSPYL2	ENST00000375442.8	protein_coding	53082367,53084545,53084755,53084954,53085227,53085631,53087776	53083305,53084622,53084866,53085099,53085321,53086310,53088540	Gene ID= ENSG00000184205.14 TPM= 53.71 Transcript Type= protein_coding
chrX	53191465	53192876	53191465	53192876	-	transcript1308.chrX.nnic@NA	transcript1308.chrX.nnic	NA	53191465	53192876	Gene ID= novel_gene_chrX_1309 TPM= 3.5 Transcript Type= NA
chrX	53266328	53281598	53266328	53281598	-	ENST00000639161.1@IQSEC2	ENST00000639161.1	protein_coding	53281496,53279564,53266328	53281598,53279659,53267064	Gene ID= ENSG00000124313.13 TPM= 4.67 Transcript Type= protein_coding
chrX	53374149	53422728	53374149	53422728	-	ENST00000322213.8@SMC1A	ENST00000322213.8	protein_coding	53422492,53414981,53414758,53413232,53412900,53411995,53411761,53409421,53409062,53405771,53405493,53405245,53405012,53403777,53403566,53399589,53396472,53396227,53394778,53383097,53382506,53382232,53381018,53380620,53374149	53422728,53415169,53414870,53413435,53413138,53412253,53411901,53409503,53409269,53405956,53405672,53405391,53405149,53403893,53403672,53399730,53396617,53396380,53394888,53383253,53382660,53382383,53381087,53380730,53380186	Gene ID= ENSG00000072501.17 TPM= 23.35 Transcript Type= protein_coding
chrX	53431258	53434373	53431258	53434373	-	ENST00000168216.10@HSD17B10	ENST00000168216.10	protein_coding	53434319,53433722,53432247,53431988,53431798,53431258	53434373,53433886,53432411,53432116,53431906,53431594	Gene ID= ENSG00000072506.12 TPM= 26.27 Transcript Type= protein_coding
chrX	53431258	53434356	53431258	53434356	-	ENST00000375304.9@HSD17B10	ENST00000375304.9	protein_coding	53434319,53433722,53432247,53431988,53431825,53431258	53434356,53433886,53432411,53432116,53431906,53431594	Gene ID= ENSG00000072506.12 TPM= 7.59 Transcript Type= protein_coding
chrX	53532096	53684169	53532096	53684169	-	ENST00000342160.7@HUWE1	ENST00000342160.7	protein_coding	53683874,53680049,53654063,53648212,53647368,53645311,53634236,53632487,53631567,53631414,53630935,53629516,53628752,53628493,53627739,53627410,53625157,53624595,53617340,53616970,53615744,53614534,53608852,53607523,53604589,53603368,53602564,53600118,53595187,53594499,53593364,53592398,53591000,53590404,53589547,53588382,53586782,53586490,53585012,53584186,53583558,53580831,53576900,53575643,53575155,53573750,53569616,53568692,53565067,53564574,53563746,53562831,53562111,53561756,53560188,53559354,53558971,53558655,53557382,53554633,53552638,53552311,53551266,53550901,53550666,53548959,53547673,53546704,53546436,53545029,53544560,53543841,53542443,53539657,53538835,53538337,53537556,53536380,53536147,53535384,53534516,53534007,53532096	53684169,53680186,53654131,53648310,53647574,53645463,53634298,53632564,53631614,53631482,53631034,53629616,53628902,53628620,53627879,53627515,53625258,53624675,53617446,53617147,53615835,53614745,53608909,53607699,53604834,53603501,53602658,53600309,53595403,53594621,53593601,53592628,53591122,53590499,53589816,53588534,53586909,53586571,53585188,53584345,53583916,53581026,53577067,53575788,53575221,53573964,53569827,53568874,53565239,53564722,53563821,53562929,53562244,53561924,53560416,53559532,53559060,53558809,53557427,53554920,53552893,53552441,53551480,53551189,53550768,53549505,53548273,53546825,53546592,53545161,53544762,53543968,53542539,53539812,53539080,53538454,53537696,53536667,53536252,53535501,53534697,53534197,53533411	Gene ID= ENSG00000086758.15 TPM= 11.68 Transcript Type= protein_coding
chrX	53532098	53686729	53532098	53686729	-	ENST00000262854.10@HUWE1	ENST00000262854.10	protein_coding	53686588,53686270,53680049,53654063,53648212,53647368,53645311,53634236,53632487,53631567,53631414,53630935,53629516,53628752,53628493,53627739,53627410,53625157,53624595,53617340,53616970,53615744,53614534,53608852,53607523,53604589,53603368,53602564,53600118,53595187,53594499,53593364,53592398,53591000,53590404,53589547,53588382,53586782,53586490,53585012,53584186,53583558,53580831,53576900,53575643,53575155,53573750,53569616,53568692,53565067,53564574,53563746,53562831,53562111,53561756,53560188,53559354,53558971,53558655,53557382,53554633,53552638,53552311,53551266,53550901,53550666,53548959,53547673,53546704,53546436,53545029,53544560,53543841,53542443,53539657,53538835,53538337,53537556,53536380,53536147,53535384,53534516,53534007,53532098	53686729,53686368,53680186,53654131,53648310,53647574,53645463,53634298,53632564,53631614,53631482,53631034,53629616,53628902,53628620,53627879,53627515,53625258,53624675,53617446,53617147,53615835,53614745,53608909,53607699,53604834,53603501,53602658,53600309,53595403,53594621,53593601,53592628,53591122,53590499,53589816,53588534,53586909,53586571,53585188,53584345,53583916,53581026,53577067,53575788,53575221,53573964,53569827,53568874,53565239,53564722,53563821,53562929,53562244,53561924,53560416,53559532,53559060,53558809,53557427,53554920,53552893,53552441,53551480,53551189,53550768,53549505,53548273,53546825,53546592,53545161,53544762,53543968,53542539,53539812,53539080,53538454,53537696,53536667,53536252,53535501,53534697,53534197,53533411	Gene ID= ENSG00000086758.15 TPM= 11.68 Transcript Type= protein_coding
chrX	54068324	54183255	54068324	54183255	-	ENST00000375180.6@FAM120C	ENST00000375180.6	protein_coding	54182500,54159370,54157689,54151245,54136491,54135528,54134831,54133773,54132692,54116545,54091312,54087755,54085715,54081322,54080232,54068324	54183255,54159616,54157771,54151373,54136590,54135604,54135111,54134046,54132863,54116794,54091426,54087964,54085916,54081460,54080289,54073287	Gene ID= ENSG00000184083.11 TPM= 4.67 Transcript Type= protein_coding
chrX	54173789	54183281	54173789	54183281	-	ENST00000477084.1@FAM120C	ENST00000477084.1	protein_coding	54182500,54173789	54183281,54174146	Gene ID= ENSG00000184083.11 TPM= 1.17 Transcript Type= protein_coding
chrX	54440376	54445498	54440376	54445498	+	transcript1336.chrX.nic@TSR2	transcript1336.chrX.nic	protein_coding	54440376,54440690	54440502,54445498	Gene ID= ENSG00000158526.7 TPM= 2.34 Transcript Type= NA
chrX	54440401	54445487	54440401	54445487	+	ENST00000375151.4@TSR2	ENST00000375151.4	protein_coding	54440401,54440690,54443400,54444008,54444416	54440502,54440780,54443491,54444184,54445487	Gene ID= ENSG00000158526.7 TPM= 23.35 Transcript Type= protein_coding
chrX	54445454	54496166	54445454	54496166	-	ENST00000375135.3@FGD1	ENST00000375135.3	protein_coding	54495126,54471314,54470583,54470016,54468787,54467784,54465696,54465451,54456509,54456220,54455692,54455448,54450271,54449659,54449143,54448806,54447311,54445454	54496166,54471487,54470760,54470457,54468876,54467932,54465852,54465589,54456567,54456366,54455784,54455527,54450301,54449760,54449268,54448967,54447454,54446414	Gene ID= ENSG00000102302.7 TPM= 8.17 Transcript Type= protein_coding
chrX	54446723	54448032	54446723	54448032	-	transcript1337.chrX.nnic@NA	transcript1337.chrX.nnic	NA	54446723	54448032	Gene ID= novel_gene_chrX_1338 TPM= 3.5 Transcript Type= NA
chrX	54530211	54561071	54530211	54561071	+	ENST00000336470.8@GNL3L	ENST00000336470.8	protein_coding	54530211,54532520,54539040,54540135,54541273,54542955,54543207,54544223,54548229,54550963,54551568,54551832,54552292,54554565,54558436,54560520	54530302,54532585,54539101,54540242,54541389,54543038,54543342,54544326,54548373,54551050,54551742,54551974,54552428,54554692,54558655,54561071	Gene ID= ENSG00000130119.15 TPM= 7.01 Transcript Type= protein_coding
chrX	54562692	54564064	54562692	54564064	-	transcript1350.chrX.nnic@NA	transcript1350.chrX.nnic	NA	54562692	54564064	Gene ID= novel_gene_chrX_1351 TPM= 7.01 Transcript Type= NA
chrX	54807705	54816007	54807705	54816007	+	transcript1356.chrX.nnic@MAGED2	transcript1356.chrX.nnic	protein_coding	54807705,54809303,54809722,54809897,54810821,54811250,54811574,54812157,54812945,54813118,54813488,54814661,54815248	54807802,54809376,54809784,54810213,54811129,54811313,54811653,54812251,54813024,54813160,54813550,54814775,54816007	Gene ID= ENSG00000102316.16 TPM= 6.42 Transcript Type= NA
chrX	54809063	54816012	54809063	54816012	+	transcript1363.chrX.nic@MAGED2	transcript1363.chrX.nic	protein_coding	54809063,54809303,54809722,54810821,54811250,54811574,54812157,54812945,54813118,54813488,54814661,54815248,54815881	54809223,54809376,54810213,54811129,54811313,54811653,54812251,54813024,54813160,54813550,54814775,54815690,54816012	Gene ID= ENSG00000102316.16 TPM= 17.51 Transcript Type= NA
chrX	54807705	54816012	54807705	54816012	+	transcript1366.chrX.nic@MAGED2	transcript1366.chrX.nic	protein_coding	54807705,54809303,54809722,54810821,54811250,54811574,54812157,54812945,54813118,54814661,54815248,54815881	54807802,54809376,54810213,54811129,54811313,54811653,54812251,54813024,54813550,54814775,54815690,54816012	Gene ID= ENSG00000102316.16 TPM= 10.51 Transcript Type= NA
chrX	54808371	54816007	54808371	54816007	+	ENST00000375058.5@MAGED2	ENST00000375058.5	protein_coding	54808371,54809303,54809722,54810821,54811250,54811574,54812157,54812945,54813118,54813488,54814661,54815248,54815881	54808433,54809376,54810213,54811129,54811313,54811653,54812251,54813024,54813160,54813550,54814775,54815690,54816007	Gene ID= ENSG00000102316.16 TPM= 50.21 Transcript Type= protein_coding
chrX	54920811	54931431	54920811	54931431	+	ENST00000173898.11@TRO	ENST00000173898.11	protein_coding	54920811,54922203,54922578,54924451,54924670,54924989,54925592,54926410,54926583,54927043,54927667,54928603,54931204	54920878,54922291,54923768,54924555,54924733,54925068,54925683,54926489,54926625,54927105,54927781,54931031,54931431	Gene ID= ENSG00000067445.20 TPM= 2.34 Transcript Type= protein_coding
chrX	55000357	55009057	55000357	55009057	+	ENST00000374987.3@APEX2	ENST00000374987.3	protein_coding	55000357,55001546,55002251,55002962,55003799,55006518	55000579,55001629,55002431,55003108,55003868,55009057	Gene ID= ENSG00000169188.4 TPM= 1.17 Transcript Type= protein_coding
chrX	55145938	55161102	55145938	55161102	-	ENST00000489298.1@FAM104B	ENST00000489298.1	protein_coding	55160865,55159129,55145938	55161102,55159228,55146311	Gene ID= ENSG00000182518.13 TPM= 1.17 Transcript Type= protein_coding
chrX	55452105	55453566	55452105	55453566	+	ENST00000342972.2@MAGEH1	ENST00000342972.2	protein_coding	55452105	55453566	Gene ID= ENSG00000187601.4 TPM= 51.37 Transcript Type= protein_coding
chrX	55717749	55758774	55717749	55758774	+	transcript1401.chrX.nic@RRAGB	transcript1401.chrX.nic	protein_coding	55717749,55719314,55722186,55729294,55731364,55751101,55753392,55755841,55757216	55718419,55719347,55722285,55729360,55731586,55751196,55753514,55755932,55758774	Gene ID= ENSG00000083750.12 TPM= 2.34 Transcript Type= NA
chrX	55717739	55758774	55717739	55758774	+	ENST00000374941.8@RRAGB	ENST00000374941.8	protein_coding	55717739,55719314,55722186,55729294,55731364,55751101,55753392,55755841,55757216,55758246	55718419,55719347,55722285,55729360,55731586,55751196,55753514,55755932,55757331,55758774	Gene ID= ENSG00000083750.12 TPM= 29.19 Transcript Type= protein_coding
chrX	56232361	56269204	56232361	56269204	+	transcript1411.chrX.nic@KLF8	transcript1411.chrX.nic	protein_coding	56232361,56250231,56265180	56233341,56250304,56269204	Gene ID= ENSG00000102349.17 TPM= 3.5 Transcript Type= NA
chrX	56563659	56566943	56563659	56566943	+	transcript1412.chrX.nnic@UBQLN2	transcript1412.chrX.nnic	protein_coding	56563659,56564504	56563740,56566943	Gene ID= ENSG00000188021.8 TPM= 16.35 Transcript Type= NA
chrX	56563639	56567868	56563639	56567868	+	ENST00000338222.6@UBQLN2	ENST00000338222.6	protein_coding	56563639	56567868	Gene ID= ENSG00000188021.8 TPM= 11.68 Transcript Type= protein_coding
chrX	56729243	56735962	56729243	56735962	+	transcript1418.chrX.nic@NBDY	transcript1418.chrX.nic	protein_coding	56729243,56732063	56729589,56735962	Gene ID= ENSG00000204272.12 TPM= 2.34 Transcript Type= NA
chrX	56729259	56818380	56729259	56818380	+	ENST00000374922.8@NBDY	ENST00000374922.8	protein_coding	56729259,56732063,56817320	56729589,56732199,56818380	Gene ID= ENSG00000204272.12 TPM= 4.67 Transcript Type= protein_coding
chrX	56975142	56995730	56975142	56995730	-	ENST00000638873.1@SPIN3	ENST00000638873.1	protein_coding	56995216,56994723,56984266,56978580,56978292,56975142	56995730,56994949,56984478,56978660,56978421,56977196	Gene ID= ENSG00000204271.12 TPM= 2.34 Transcript Type= nonsense_mediated_decay
chrX	56975120	56995555	56975120	56995555	-	ENST00000640131.1@SPIN3	ENST00000640131.1	protein_coding	56995216,56994723,56984266,56978580,56975120	56995555,56994949,56984478,56978660,56977196	Gene ID= ENSG00000204271.12 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chrX	56990831	56995738	56990831	56995738	-	ENST00000374919.5@SPIN3	ENST00000374919.5	protein_coding	56995216,56990831	56995738,56994949	Gene ID= ENSG00000204271.12 TPM= 8.17 Transcript Type= protein_coding
chrX	56976382	56995525	56976382	56995525	-	ENST00000478405.1@SPIN3	ENST00000478405.1	protein_coding	56995242,56994723,56984266,56978580,56976382	56995525,56994949,56984478,56978660,56977196	Gene ID= ENSG00000204271.12 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chrX	57119682	57121491	57119682	57121491	-	ENST00000275988.5@SPIN2B	ENST00000275988.5	protein_coding	57121293,57119682	57121491,57120634	Gene ID= ENSG00000186787.8 TPM= 1.75 Transcript Type= protein_coding
chrX	57119683	57121546	57119683	57121546	-	ENST00000333933.3@SPIN2B	ENST00000333933.3	protein_coding	57121238,57119683	57121546,57120631	Gene ID= ENSG00000186787.8 TPM= 6.42 Transcript Type= protein_coding
chrX	57286706	57489196	57286706	57489196	+	ENST00000374900.4@FAAH2	ENST00000374900.4	protein_coding	57286706,57292498,57310593,57331598,57341271,57378651,57380912,57431918,57446928,57448524,57488757	57287017,57292580,57310729,57331807,57341390,57378786,57381029,57432037,57447039,57448718,57489196	Gene ID= ENSG00000165591.6 TPM= 4.67 Transcript Type= protein_coding
chrX	57591652	57597545	57591652	57597545	+	ENST00000374888.2@ZXDB	ENST00000374888.2	protein_coding	57591652	57597545	Gene ID= ENSG00000198455.4 TPM= 5.84 Transcript Type= protein_coding
chrX	57905295	57910479	57905295	57910479	-	transcript1440.chrX.nnic@NA	transcript1440.chrX.nnic	NA	57905295	57910479	Gene ID= novel_gene_chrX_1441 TPM= 12.84 Transcript Type= NA
chrX	63397466	63561071	63397466	63561071	-	transcript1446.chrX.nnic@LINC01278	transcript1446.chrX.nnic	processed_transcript	63560832,63432364,63399781,63397466	63561071,63432491,63399903,63398089	Gene ID= ENSG00000235437.7 TPM= 2.34 Transcript Type= NA
chrX	63426558	63561068	63426558	63561068	-	transcript1447.chrX.nnic@LINC01278	transcript1447.chrX.nnic	processed_transcript	63560832,63509944,63432364,63426558	63561068,63510079,63432491,63426996	Gene ID= ENSG00000235437.7 TPM= 2.92 Transcript Type= NA
chrX	63426558	63561071	63426558	63561071	-	transcript1449.chrX.nnic@LINC01278	transcript1449.chrX.nnic	processed_transcript	63560832,63432364,63426558	63561071,63432491,63426996	Gene ID= ENSG00000235437.7 TPM= 4.09 Transcript Type= NA
chrX	63426560	63431612	63426560	63431612	-	ENST00000608623.1@LINC01278	ENST00000608623.1	processed_transcript	63426560	63431612	Gene ID= ENSG00000235437.7 TPM= 26.85 Transcript Type= retained_intron
chrX	63347228	63351344	63347228	63351344	-	ENST00000374884.2@SPIN4	ENST00000374884.2	protein_coding	63347228	63351344	Gene ID= ENSG00000186767.6 TPM= 47.87 Transcript Type= protein_coding
chrX	64916381	64976484	64916381	64976484	-	ENST00000374839.7@ZC4H2	ENST00000374839.7	protein_coding	64976325,64921817,64920081,64919042,64916381	64976484,64921988,64920253,64919204,64917896	Gene ID= ENSG00000126970.15 TPM= 1.17 Transcript Type= protein_coding
chrX	65512582	65534810	65512582	65534810	-	transcript1466.chrX.nnic@LAS1L	transcript1466.chrX.nnic	protein_coding	65534480,65533610,65532561,65531357,65529594,65528260,65524965,65524056,65523822,65523560,65517987,65514823,65512582	65534810,65533735,65532630,65531438,65529878,65529258,65525050,65524262,65523876,65523707,65518465,65514973,65512901	Gene ID= ENSG00000001497.16 TPM= 2.34 Transcript Type= NA
chrX	65520429	65534810	65520429	65534810	-	transcript1468.chrX.nnic@LAS1L	transcript1468.chrX.nnic	protein_coding	65534480,65533610,65532561,65531357,65529594,65529212,65528260,65524965,65524564,65524056,65523560,65520429	65534810,65533735,65532630,65531438,65529878,65529258,65528369,65525050,65524614,65524262,65523707,65521287	Gene ID= ENSG00000001497.16 TPM= 2.34 Transcript Type= NA
chrX	65512582	65534754	65512582	65534754	-	ENST00000374807.9@LAS1L	ENST00000374807.9	protein_coding	65534480,65533610,65532561,65531357,65529594,65529212,65528260,65524965,65524056,65523560,65517987,65514823,65512582	65534754,65533735,65532630,65531438,65529878,65529258,65528369,65525050,65524262,65523707,65518465,65514973,65512901	Gene ID= ENSG00000001497.16 TPM= 50.21 Transcript Type= protein_coding
chrX	65512582	65534756	65512582	65534756	-	ENST00000374811.7@LAS1L	ENST00000374811.7	protein_coding	65534480,65533610,65532561,65531357,65529594,65529212,65528260,65524965,65524564,65524056,65523560,65517987,65514823,65512582	65534756,65533735,65532630,65531438,65529878,65529258,65528369,65525050,65524614,65524262,65523707,65518465,65514973,65512901	Gene ID= ENSG00000001497.16 TPM= 12.84 Transcript Type= protein_coding
chrX	65667670	65741931	65667670	65741931	+	ENST00000360270.6@MSN	ENST00000360270.6	protein_coding	65667670,65716818,65727814,65729438,65731107,65731838,65733184,65735267,65736795,65737178,65738525,65738970,65739729	65667853,65716901,65727909,65729712,65731190,65731984,65733280,65735430,65736925,65737338,65738617,65739194,65741931	Gene ID= ENSG00000147065.16 TPM= 650.35 Transcript Type= protein_coding
chrX	66015461	66020422	66015461	66020422	+	ENST00000618234.4@AL034397.3	ENST00000618234.4	antisense_RNA	66015461,66018824	66015551,66020422	Gene ID= ENSG00000274536.6 TPM= 1.17 Transcript Type= antisense_RNA
chrX	66021738	66040145	66021738	66040145	-	transcript1488.chrX.nic@VSIG4	transcript1488.chrX.nic	protein_coding	66039944,66033474,66032468,66028050,66027449,66025025,66022841,66021738	66040145,66033830,66032749,66028112,66027526,66025129,66022862,66022166	Gene ID= ENSG00000155659.14 TPM= 29.19 Transcript Type= NA
chrX	66021738	66040107	66021738	66040107	-	ENST00000374737.8@VSIG4	ENST00000374737.8	protein_coding	66039944,66033474,66032468,66028050,66027449,66025025,66022841,66021738	66040107,66033830,66032749,66028112,66027526,66025129,66022862,66022500	Gene ID= ENSG00000155659.14 TPM= 173 Transcript Type= protein_coding
chrX	66021769	66040060	66021769	66040060	-	ENST00000412866.2@VSIG4	ENST00000412866.2	protein_coding	66039944,66033474,66028050,66027449,66025025,66022841,66021769	66040060,66033830,66028112,66027526,66025129,66022862,66022500	Gene ID= ENSG00000155659.14 TPM= 31.91 Transcript Type= protein_coding
chrX	66021740	66040125	66021740	66040125	-	ENST00000455586.6@VSIG4	ENST00000455586.6	protein_coding	66039944,66033474,66032468,66028050,66027449,66025025,66021740	66040125,66033830,66032749,66028112,66027526,66025129,66022862	Gene ID= ENSG00000155659.14 TPM= 14.21 Transcript Type= protein_coding
chrX	66164359	66267383	66164359	66267383	+	ENST00000441993.6@HEPH	ENST00000441993.6	protein_coding	66164359,66170558,66172355,66173589,66188359,66189684,66192130,66193502,66195098,66197683,66198878,66200540,66203364,66207195,66208115,66255035,66256105,66258840,66260100,66263644,66266443	66164470,66170737,66172599,66173801,66188541,66189938,66192298,66193638,66195229,66197894,66199028,66200752,66203577,66207334,66208246,66255141,66256330,66258979,66260262,66263688,66267383	Gene ID= ENSG00000089472.16 TPM= 16.35 Transcript Type= protein_coding
chrX	66595637	66639077	66595637	66639077	-	transcript1503.chrX.nnic@EDA2R	transcript1503.chrX.nnic	protein_coding	66638995,66615934,66605048,66604421,66602633,66599474,66595637	66639077,66616030,66605226,66604506,66602797,66599866,66598093	Gene ID= ENSG00000131080.14 TPM= 2.72 Transcript Type= NA
chrX	66595637	66639041	66595637	66639041	-	ENST00000374719.7@EDA2R	ENST00000374719.7	protein_coding	66638995,66615934,66605048,66604421,66602633,66599474,66595637	66639041,66616030,66605226,66604506,66602797,66599860,66598093	Gene ID= ENSG00000131080.14 TPM= 3.89 Transcript Type= protein_coding
chrX	66595642	66639298	66595642	66639298	-	ENST00000451436.6@EDA2R	ENST00000451436.6	protein_coding	66639201,66615934,66605048,66604421,66602633,66599474,66595642	66639298,66616030,66605226,66604506,66602797,66599860,66598093	Gene ID= ENSG00000131080.14 TPM= 1.55 Transcript Type= protein_coding
chrX	68046598	68433841	68046598	68433841	-	transcript1511.chrX.nnic@OPHN1	transcript1511.chrX.nnic	protein_coding	68433631,68432867,68299001,68283056,68274738,68234487,68213862,68212108,68210153,68206573,68201619,68197186,68194465,68193890,68192919,68119253,68113181,68111854,68096870,68073152,68063854,68053645,68052540,68048416,68046598	68433841,68433024,68299096,68283117,68274809,68234588,68213972,68212212,68210282,68206673,68201710,68197264,68194498,68193952,68192993,68119332,68113244,68111959,68097029,68073299,68064177,68053810,68052590,68048459,68047163	Gene ID= ENSG00000079482.12 TPM= 2.34 Transcript Type= NA
chrX	68042901	68433482	68042901	68433482	-	transcript1512.chrX.nnic@OPHN1	transcript1512.chrX.nnic	protein_coding	68433168,68432867,68299001,68283056,68274738,68234487,68213862,68212108,68210153,68206573,68201619,68197186,68194465,68193890,68192919,68119248,68113181,68111854,68096870,68073152,68063854,68053645,68052540,68042901	68433482,68433024,68299096,68283117,68274809,68234588,68213972,68212212,68210282,68206673,68201710,68197264,68194498,68193952,68192993,68119332,68113239,68111959,68097029,68073299,68064177,68053810,68052590,68047163	Gene ID= ENSG00000079482.12 TPM= 2.34 Transcript Type= NA
chrX	68208042	68433843	68208042	68433843	-	transcript1513.chrX.nic@OPHN1	transcript1513.chrX.nic	protein_coding	68433168,68432867,68299001,68283056,68274738,68234487,68213862,68212108,68208042	68433843,68433024,68299096,68283117,68274809,68234588,68213972,68212212,68210282	Gene ID= ENSG00000079482.12 TPM= 3.5 Transcript Type= NA
chrX	68498323	68537285	68498323	68537285	+	ENST00000462683.5@YIPF6	ENST00000462683.5	protein_coding	68498323,68511849,68513327,68518770,68521372,68522760,68531881	68499123,68511977,68513405,68518812,68521497,68522917,68537285	Gene ID= ENSG00000181704.11 TPM= 10.51 Transcript Type= protein_coding
chrX	68498782	68537266	68498782	68537266	+	ENST00000374622.3@YIPF6	ENST00000374622.3	protein_coding	68498782,68513327,68518770,68521372,68522760,68531881	68499123,68513405,68518812,68521497,68522917,68537266	Gene ID= ENSG00000181704.11 TPM= 2.34 Transcript Type= protein_coding
chrX	68693634	68725836	68693634	68725836	+	transcript1537.chrX.nnic@STARD8	transcript1537.chrX.nnic	protein_coding	68693634,68712914,68715294,68716368,68717200,68719225,68720264,68720924,68721536,68722047,68722422,68723626,68723945,68724305	68693826,68712985,68715375,68716431,68718629,68719398,68720423,68721122,68721746,68722161,68722646,68723843,68724121,68725836	Gene ID= ENSG00000130052.13 TPM= 16.46 Transcript Type= NA
chrX	68693651	68725833	68693651	68725833	+	ENST00000374597.3@STARD8	ENST00000374597.3	protein_coding	68693651,68712914,68715294,68716368,68717212,68719225,68720264,68720924,68721536,68722047,68722422,68723626,68723945,68724305	68693826,68712985,68715375,68716431,68718629,68719398,68720423,68721122,68721746,68722161,68722646,68723843,68724121,68725833	Gene ID= ENSG00000130052.13 TPM= 73.09 Transcript Type= protein_coding
chrX	68828997	68842147	68828997	68842147	+	ENST00000204961.4@EFNB1	ENST00000204961.4	protein_coding	68828997,68838617,68839664,68839960,68840242	68829904,68838894,68839756,68840088,68842147	Gene ID= ENSG00000090776.5 TPM= 93.41 Transcript Type= protein_coding
chrX	68996194	69045232	68996194	69045232	+	transcript1555.chrX.nnic@NA	transcript1555.chrX.nnic	NA	68996194,69030999,69033606,69036581,69037065,69040094	68996304,69031083,69033755,69036624,69037116,69045232	Gene ID= novel_gene_chrX_1556 TPM= 2.34 Transcript Type= NA
chrX	69160862	69165521	69160862	69165521	-	ENST00000361478.1@PJA1	ENST00000361478.1	protein_coding	69165372,69160862	69165521,69163466	Gene ID= ENSG00000181191.11 TPM= 19.85 Transcript Type= protein_coding
chrX	69160891	69165793	69160891	69165793	-	ENST00000374571.4@PJA1	ENST00000374571.4	protein_coding	69165372,69160891	69165793,69163140	Gene ID= ENSG00000181191.11 TPM= 53.71 Transcript Type= protein_coding
chrX	69616067	70039469	69616067	70039469	+	ENST00000374553.6@EDA	ENST00000374553.6	protein_coding	69616067,69957027,70023218,70027857,70029504,70030469,70033398,70035358	69616704,69957132,70023241,70028036,70029538,70030520,70033522,70039469	Gene ID= ENSG00000158813.17 TPM= 2.34 Transcript Type= protein_coding
chrX	69957024	70039469	69957024	70039469	+	ENST00000616899.1@EDA	ENST00000616899.1	protein_coding	69957024,70023218,70027857,70029504,70030469,70033398,70035358	69957132,70023241,70028036,70029538,70030520,70033528,70039469	Gene ID= ENSG00000158813.17 TPM= 1.17 Transcript Type= protein_coding
chrX	70133449	70166324	70133449	70166324	+	ENST00000342206.10@IGBP1	ENST00000342206.10	protein_coding	70133449,70134523,70146633,70148761,70150210,70165833	70134135,70134816,70146828,70148840,70150322,70166324	Gene ID= ENSG00000089289.15 TPM= 30.36 Transcript Type= protein_coding
chrX	70133463	70166324	70133463	70166324	+	ENST00000356413.4@IGBP1	ENST00000356413.4	protein_coding	70133463,70133723,70134523,70146633,70148761,70150210,70165833	70133540,70134135,70134816,70146828,70148840,70150322,70166324	Gene ID= ENSG00000089289.15 TPM= 31.53 Transcript Type= protein_coding
chrX	70286595	70289979	70286595	70289979	-	ENST00000239666.8@PDZD11	ENST00000239666.8	protein_coding	70289860,70289255,70288430,70288117,70287732,70287276,70286595	70289979,70289354,70288513,70288173,70287830,70287336,70287116	Gene ID= ENSG00000120509.10 TPM= 23.35 Transcript Type= protein_coding
chrX	70452305	70505487	70452305	70505487	+	ENST00000374355.7@DLG3	ENST00000374355.7	protein_coding	70452305,70453637,70454214,70479150,70492107,70492521,70493376,70497180,70498520,70499176,70499877,70500471,70500898,70502163	70452755,70453793,70454316,70479264,70492283,70492596,70493475,70497221,70498570,70499277,70500049,70500580,70500989,70505487	Gene ID= ENSG00000082458.11 TPM= 10.51 Transcript Type= protein_coding
chrX	70455096	70505485	70455096	70505485	+	ENST00000542398.1@DLG3	ENST00000542398.1	protein_coding	70455096,70479150,70492107,70492521,70493376,70497180,70498520,70499176,70499877,70500471,70500898,70502163	70455263,70479264,70492283,70492596,70493475,70497221,70498570,70499277,70500049,70500580,70500989,70505485	Gene ID= ENSG00000082458.11 TPM= 12.84 Transcript Type= protein_coding
chrX	70455153	70505487	70455153	70505487	+	transcript1587.chrX.nnic@DLG3	transcript1587.chrX.nnic	protein_coding	70455153,70479150,70492107,70492521,70493376,70498520,70499176,70499877,70500471,70500898,70502163	70455263,70479264,70492283,70492596,70493475,70498570,70499277,70500049,70500580,70500989,70505487	Gene ID= ENSG00000082458.11 TPM= 5.84 Transcript Type= NA
chrX	71059246	71068423	71059246	71068423	-	ENST00000374274.7@SNX12	ENST00000374274.7	protein_coding	71068142,71062854,71061843,71059246	71068423,71062949,71061967,71061118	Gene ID= ENSG00000147164.11 TPM= 8.17 Transcript Type= protein_coding
chrX	71096197	71103535	71096197	71103535	+	ENST00000374259.7@FOXO4	ENST00000374259.7	protein_coding	71096197,71100684,71102077	71096981,71101740,71103535	Gene ID= ENSG00000184481.16 TPM= 10.51 Transcript Type= protein_coding
chrX	71107404	71111631	71107404	71111631	-	ENST00000374202.6@IL2RG	ENST00000374202.6	protein_coding	71111425,71110897,71110504,71110156,71109228,71108599,71108277,71107404	71111631,71111050,71110688,71110295,71109390,71108695,71108346,71107921	Gene ID= ENSG00000147168.12 TPM= 25.69 Transcript Type= protein_coding
chrX	71118556	71142453	71118556	71142453	+	ENST00000333646.10@MED12	ENST00000333646.10	protein_coding	71118556,71119373,71119686,71120014,71120971,71121327,71121562,71122200,71122508,71122738,71123095,71123594,71124159,71124764,71124976,71125351,71125663,71126036,71126341,71126969,71127336,71127893,71128296,71128598,71129114,71129316,71129680,71130035,71131550,71132073,71132377,71132845,71133123,71134357,71134713,71135092,71136281,71136879,71137187,71137558,71137726,71140635,71141230,71141883,71142175	71118853,71119477,71119877,71120170,71121152,71121437,71121816,71122346,71122607,71122874,71123226,71123720,71124388,71124844,71125146,71125495,71125713,71126154,71126484,71127132,71127467,71128120,71128440,71128718,71129215,71129429,71129855,71130214,71131621,71132206,71132538,71132956,71133212,71134466,71134848,71135253,71136655,71137029,71137392,71137635,71137943,71140857,71141370,71141964,71142453	Gene ID= ENSG00000184634.15 TPM= 17.51 Transcript Type= protein_coding
chrX	71215212	71225516	71215212	71225516	+	ENST00000374022.3@GJB1	ENST00000374022.3	protein_coding	71215212,71223692	71215290,71225516	Gene ID= ENSG00000169562.9 TPM= 1.17 Transcript Type= protein_coding
chrX	71215194	71225200	71215194	71225200	+	ENST00000374029.1@GJB1	ENST00000374029.1	protein_coding	71215194,71223692	71215271,71225200	Gene ID= ENSG00000169562.9 TPM= 4.67 Transcript Type= protein_coding
chrX	71249204	71254575	71249204	71254575	-	ENST00000373981.5@ZMYM3	ENST00000373981.5	protein_coding	71254481,71252589,71251558,71251178,71250432,71250026,71249204	71254575,71253274,71251601,71251244,71250726,71250203,71249679	Gene ID= ENSG00000147130.14 TPM= 1.17 Transcript Type= protein_coding
chrX	71283590	71300269	71283590	71300269	+	ENST00000373856.7@NONO	ENST00000373856.7	protein_coding	71283590,71284397,71284984,71290629,71291779,71294227,71296565,71296851,71297377,71297836,71298469,71298707,71299942	71283721,71284453,71285097,71290791,71291972,71294528,71296660,71297047,71297461,71297938,71298508,71298816,71300269	Gene ID= ENSG00000147140.15 TPM= 1.17 Transcript Type= protein_coding
chrX	71283583	71301168	71283583	71301168	+	ENST00000276079.12@NONO	ENST00000276079.12	protein_coding	71283583,71284397,71290629,71291779,71294227,71296565,71296851,71297377,71297836,71298469,71298707,71299942	71283721,71284453,71290791,71291972,71294528,71296660,71297047,71297461,71297938,71298508,71298816,71301168	Gene ID= ENSG00000147140.15 TPM= 312.04 Transcript Type= protein_coding
chrX	71283610	71301168	71283610	71301168	+	transcript1618.chrX.nic@NONO	transcript1618.chrX.nic	protein_coding	71283610,71284397,71290629,71291779,71294227,71296565,71296851,71297377,71297836,71298707,71299942	71283721,71284453,71290791,71291972,71294528,71296660,71297047,71297461,71298508,71298816,71301168	Gene ID= ENSG00000147140.15 TPM= 14.89 Transcript Type= NA
chrX	71283633	71301168	71283633	71301168	+	ENST00000373841.5@NONO	ENST00000373841.5	protein_coding	71283633,71290629,71291779,71294227,71296565,71296851,71297377,71297836,71298469,71298707,71299942	71283721,71290791,71291972,71294528,71296660,71297047,71297461,71297938,71298508,71298816,71301168	Gene ID= ENSG00000147140.15 TPM= 23.64 Transcript Type= protein_coding
chrX	71366239	71466004	71366239	71466004	+	ENST00000423759.5@TAF1	ENST00000423759.5	protein_coding	71366239,71367499,71368054,71375167,71376950,71377603,71378235,71378824,71381743,71382536,71382761,71382991,71383962,71384945,71387261,71388237,71388738,71389585,71392569,71392875,71393301,71394067,71397253,71398572,71401528,71406638,71407574,71407974,71421309,71423117,71423974,71424154,71454170,71454741,71455007,71458241,71459552,71460626,71463824	71366494,71367613,71368170,71375286,71377191,71377821,71378453,71379031,71381919,71382663,71382868,71383164,71384135,71385049,71387461,71388378,71388868,71389665,71392718,71392994,71393476,71394245,71397466,71398737,71401739,71406746,71407672,71408151,71421376,71423239,71424066,71424238,71454237,71454857,71455012,71458366,71459708,71460803,71466004	Gene ID= ENSG00000147133.15 TPM= 3.5 Transcript Type= protein_coding
chrX	71533083	71575897	71533083	71575897	+	ENST00000373719.7@OGT	ENST00000373719.7	protein_coding	71533083,71536178,71537829,71544567,71547907,71554513,71555190,71555954,71556680,71556952,71557195,71557493,71559267,71559588,71561775,71562847,71563130,71563329,71564601,71567500,71567993,71573620	71533336,71536358,71538072,71544635,71548023,71554592,71555385,71556094,71556780,71557105,71557296,71557672,71559425,71559677,71561900,71563017,71563246,71563499,71564753,71567752,71568116,71575897	Gene ID= ENSG00000147162.13 TPM= 25.69 Transcript Type= protein_coding
chrX	71533123	71573816	71533123	71573816	+	ENST00000373701.7@OGT	ENST00000373701.7	protein_coding	71533123,71536208,71537829,71544567,71547907,71554513,71555190,71555954,71556680,71556952,71557195,71557493,71559267,71559588,71561775,71562847,71563130,71563329,71564601,71567500,71567993,71573620	71533336,71536358,71538072,71544635,71548023,71554592,71555385,71556094,71556780,71557105,71557296,71557672,71559425,71559677,71561900,71563017,71563246,71563499,71564753,71567752,71568116,71573816	Gene ID= ENSG00000147162.13 TPM= 3.5 Transcript Type= protein_coding
chrX	71535127	71540283	71535127	71540283	-	transcript1635.chrX.nnic@NA	transcript1635.chrX.nnic	NA	71535127	71540283	Gene ID= novel_gene_chrX_1636 TPM= 5.84 Transcript Type= NA
chrX	71697196	71706455	71697196	71706455	+	ENST00000627173.1@LINC00891	ENST00000627173.1	lincRNA	71697196,71700821,71702672	71697301,71701043,71706455	Gene ID= ENSG00000281852.1 TPM= 7.01 Transcript Type= lincRNA
chrX	72127110	72131901	72127110	72131901	-	ENST00000479991.1@RTL5	ENST00000479991.1	protein_coding	72128164,72127110	72131901,72127710	Gene ID= ENSG00000242732.4 TPM= 14.01 Transcript Type= nonsense_mediated_decay
chrX	72181679	72198344	72181679	72198344	+	ENST00000373669.6@PIN4	ENST00000373669.6	protein_coding	72181679,72186461,72196785,72197368	72181828,72186534,72196904,72198344	Gene ID= ENSG00000102309.12 TPM= 4.67 Transcript Type= protein_coding
chrX	72204660	72239047	72204660	72239047	-	ENST00000334463.3@ERCC6L	ENST00000334463.3	protein_coding	72238844,72204660	72239047,72208698	Gene ID= ENSG00000186871.6 TPM= 1.17 Transcript Type= protein_coding
chrX	72272042	72277300	72272042	72277300	-	ENST00000316084.9@RPS4X	ENST00000316084.9	protein_coding	72277193,72276157,72275544,72275053,72273801,72273232,72272042	72277300,72276234,72275724,72275150,72273972,72273389,72272772	Gene ID= ENSG00000198034.10 TPM= 1251.66 Transcript Type= protein_coding
chrX	72329516	72573103	72329516	72573103	-	ENST00000373573.7@HDAC8	ENST00000373573.7	protein_coding	72572651,72572057,72568754,72567889,72495156,72490929,72488933,72464559,72462004,72351733,72329516	72573103,72572109,72568884,72568030,72495268,72491006,72489041,72464731,72462098,72351838,72330076	Gene ID= ENSG00000147099.19 TPM= 9.34 Transcript Type= protein_coding
chrX	72473416	72573048	72473416	72573048	-	ENST00000439122.6@HDAC8	ENST00000439122.6	protein_coding	72572651,72572057,72568754,72567889,72495156,72490929,72488933,72473416	72573048,72572109,72568884,72568030,72495268,72491006,72489041,72474729	Gene ID= ENSG00000147099.19 TPM= 3.5 Transcript Type= protein_coding
chrX	72567585	72572853	72567585	72572853	-	ENST00000373554.5@HDAC8	ENST00000373554.5	protein_coding	72572651,72572057,72568754,72567585	72572853,72572109,72568884,72568030	Gene ID= ENSG00000147099.19 TPM= 1.17 Transcript Type= protein_coding
chrX	72484869	72487745	72484869	72487745	+	transcript1665.chrX.nnic@NA	transcript1665.chrX.nnic	NA	72484869	72487745	Gene ID= novel_gene_chrX_1666 TPM= 3.5 Transcript Type= NA
chrX	73944312	74004551	73944312	74004551	+	transcript1680.chrX.nic@JPX	transcript1680.chrX.nic	lincRNA	73944312,73944584,73994840,73998768,73998954,74004270	73944465,73944662,73994961,73998844,74000496,74004551	Gene ID= ENSG00000225470.7 TPM= 7.01 Transcript Type= NA
chrX	73944312	73947335	73944312	73947335	+	transcript1684.chrX.nic@JPX	transcript1684.chrX.nic	lincRNA	73944312,73944584,73946999	73944465,73944662,73947335	Gene ID= ENSG00000225470.7 TPM= 3.5 Transcript Type= NA
chrX	73944324	74004551	73944324	74004551	+	ENST00000602920.5@JPX	ENST00000602920.5	lincRNA	73944324,73944584,73994840,74004270	73944465,73944662,73994961,74004551	Gene ID= ENSG00000225470.7 TPM= 3.5 Transcript Type= lincRNA
chrX	74245085	74292594	74245085	74292594	-	transcript1685.chrX.nic@FTX	transcript1685.chrX.nic	lincRNA	74292427,74281702,74280931,74280394,74274342,74245085	74292594,74281848,74281085,74280494,74274410,74247923	Gene ID= ENSG00000230590.9 TPM= 4.67 Transcript Type= NA
chrX	74278126	74293550	74278126	74293550	-	transcript1687.chrX.nic@FTX	transcript1687.chrX.nic	lincRNA	74293352,74281702,74280931,74278126	74293550,74281848,74281085,74280494	Gene ID= ENSG00000230590.9 TPM= 7.59 Transcript Type= NA
chrX	74273149	74274201	74273149	74274201	+	transcript1690.chrX.nnic@NA	transcript1690.chrX.nnic	NA	74273149	74274201	Gene ID= novel_gene_chrX_1691 TPM= 3.5 Transcript Type= NA
chrX	74275956	74279096	74275956	74279096	+	transcript1692.chrX.nnic@NA	transcript1692.chrX.nnic	NA	74275956	74279096	Gene ID= novel_gene_chrX_1693 TPM= 12.26 Transcript Type= NA
chrX	74421461	74533917	74421461	74533917	+	ENST00000587091.5@SLC16A2	ENST00000587091.5	protein_coding	74421461,74520990,74524359,74525750,74529213,74531333	74422067,74521134,74524809,74525893,74529441,74533917	Gene ID= ENSG00000147100.10 TPM= 17.51 Transcript Type= protein_coding
chrX	74590118	74614617	74590118	74614617	-	ENST00000349225.2@RLIM	ENST00000349225.2	protein_coding	74614422,74612582,74595809,74594306,74590118	74614617,74612643,74596000,74594389,74593061	Gene ID= ENSG00000131263.12 TPM= 2.34 Transcript Type= protein_coding
chrX	74585217	74614617	74585217	74614617	-	ENST00000332687.10@RLIM	ENST00000332687.10	protein_coding	74614422,74595809,74594306,74585217	74614617,74596000,74594389,74593061	Gene ID= ENSG00000131263.12 TPM= 2.34 Transcript Type= protein_coding
chrX	75053280	75156297	75053280	75156297	-	ENST00000253577.7@ABCB7	ENST00000253577.7	protein_coding	75156105,75114754,75112886,75098942,75076522,75075362,75073868,75073689,75071509,75070365,75069291,75069007,75065070,75062328,75060223,75053280	75156297,75114834,75112972,75099061,75076654,75075630,75073956,75073776,75071683,75070522,75069454,75069136,75065241,75062431,75060330,75053585	Gene ID= ENSG00000131269.15 TPM= 4.67 Transcript Type= protein_coding
chrX	75053284	75156280	75053284	75156280	-	ENST00000373394.7@ABCB7	ENST00000373394.7	protein_coding	75156105,75114754,75112886,75098942,75076522,75075362,75073868,75073689,75071509,75070365,75069291,75069007,75065070,75062328,75060223,75053284	75156280,75114831,75112972,75099061,75076654,75075630,75073956,75073776,75071683,75070522,75069454,75069136,75065241,75062431,75060330,75053585	Gene ID= ENSG00000131269.15 TPM= 7.01 Transcript Type= protein_coding
chrX	75274088	75304600	75274088	75304600	+	ENST00000373383.8@UPRT	ENST00000373383.8	protein_coding	75274088,75293472,75296342,75297491,75299735,75300867,75303405	75274640,75293514,75296411,75297553,75299896,75300965,75304600	Gene ID= ENSG00000094841.13 TPM= 11.68 Transcript Type= protein_coding
chrX	75368431	75523502	75368431	75523502	-	ENST00000541184.1@ZDHHC15	ENST00000541184.1	protein_coding	75522889,75478891,75450802,75431451,75429948,75429078,75424652,75421864,75417087,75379120,75368431	75523502,75478985,75450922,75431520,75429980,75429198,75424784,75421990,75417190,75379198,75372945	Gene ID= ENSG00000102383.13 TPM= 1.17 Transcript Type= protein_coding
chrX	75739366	75747143	75739366	75747143	-	transcript1734.chrX.nnic@NA	transcript1734.chrX.nnic	NA	75739366	75747143	Gene ID= novel_gene_chrX_1735 TPM= 4.67 Transcript Type= NA
chrX	75743372	75747181	75743372	75747181	-	transcript1732.chrX.nnic@NA	transcript1732.chrX.nnic	NA	75743372	75747181	Gene ID= novel_gene_chrX_1733 TPM= 7.01 Transcript Type= NA
chrX	76182096	76187392	76182096	76187392	+	transcript1741.chrX.nnic@NA	transcript1741.chrX.nnic	NA	76182096	76187392	Gene ID= novel_gene_chrX_1742 TPM= 2.34 Transcript Type= NA
chrX	77504878	77786269	77504878	77786269	-	ENST00000373344.9@ATRX	ENST00000373344.9	protein_coding	77785982,77717131,77698574,77697583,77696577,77693824,77688818,77684939,77681520,77676226,77664645,77663382,77656560,77654098,77652114,77635915,77634594,77633566,77633207,77620395,77618806,77616613,77600434,77599732,77599411,77593696,77589834,77574250,77558669,77557451,77523252,77522263,77521403,77520788,77504878	77786269,77717243,77698629,77697635,77696704,77693937,77688927,77685006,77684593,77676298,77664778,77663558,77656653,77654200,77652353,77636056,77634703,77633712,77633384,77620532,77618981,77616730,77600564,77599820,77599580,77593849,77589940,77574358,77558846,77557645,77523401,77522388,77521498,77520916,77508629	Gene ID= ENSG00000085224.21 TPM= 5.84 Transcript Type= protein_coding
chrX	77664684	77786247	77664684	77786247	-	transcript1765.chrX.nic@ATRX	transcript1765.chrX.nic	protein_coding	77785982,77717131,77698574,77697583,77696577,77688818,77684939,77681520,77676226,77664684	77786247,77717243,77698629,77697635,77696704,77688927,77685006,77684593,77676298,77664778	Gene ID= ENSG00000085224.21 TPM= 2.34 Transcript Type= NA
chrX	77673954	77786247	77673954	77786247	-	transcript1766.chrX.nic@ATRX	transcript1766.chrX.nic	protein_coding	77785982,77717131,77698574,77697583,77696577,77693824,77688818,77684939,77681520,77673954	77786247,77717243,77698629,77697635,77696704,77693937,77688927,77685006,77684593,77676298	Gene ID= ENSG00000085224.21 TPM= 4.67 Transcript Type= NA
chrX	77826364	77895548	77826364	77895548	-	transcript1754.chrX.nnic@MAGT1	transcript1754.chrX.nnic	protein_coding	77895309,77875428,77870808,77857357,77856733,77855501,77853901,77841246,77830805,77828611,77826364	77895548,77875597,77870925,77857497,77856873,77855590,77853964,77841320,77830895,77829235,77828034	Gene ID= ENSG00000102158.19 TPM= 22.48 Transcript Type= NA
chrX	77826364	77895548	77826364	77895548	-	transcript1755.chrX.nnic@MAGT1	transcript1755.chrX.nnic	protein_coding	77895309,77875428,77870808,77857357,77856733,77855501,77853901,77841246,77830805,77828554,77826364	77895548,77875597,77870925,77857497,77856873,77855590,77853964,77841320,77830895,77829235,77828037	Gene ID= ENSG00000102158.19 TPM= 7.3 Transcript Type= NA
chrX	77826364	77895446	77826364	77895446	-	transcript1767.chrX.nnic@MAGT1	transcript1767.chrX.nnic	protein_coding	77895309,77875428,77870808,77857357,77856733,77855501,77853901,77841246,77828611,77826364	77895446,77875597,77870925,77857497,77856873,77855590,77853964,77841320,77829235,77828034	Gene ID= ENSG00000102158.19 TPM= 2.63 Transcript Type= NA
chrX	77827461	77895431	77827461	77895431	-	ENST00000618282.4@MAGT1	ENST00000618282.4	protein_coding	77895309,77875428,77870808,77857357,77856733,77855501,77853901,77841246,77830805,77827461	77895431,77875597,77870925,77857497,77856873,77855590,77853964,77841320,77830895,77829235	Gene ID= ENSG00000102158.19 TPM= 5.84 Transcript Type= protein_coding
chrX	77899438	77907373	77899438	77907373	+	ENST00000481445.1@COX7B	ENST00000481445.1	protein_coding	77899438,77902643,77905184	77899593,77902767,77907373	Gene ID= ENSG00000131174.4 TPM= 52.54 Transcript Type= protein_coding
chrX	77900326	77902314	77900326	77902314	-	transcript1795.chrX.nnic@NA	transcript1795.chrX.nnic	NA	77900326	77902314	Gene ID= novel_gene_chrX_1796 TPM= 3.5 Transcript Type= NA
chrX	78129748	78139706	78129748	78139706	-	ENST00000341864.5@TAF9B	ENST00000341864.5	protein_coding	78139561,78138843,78137962,78137749,78136915,78133338,78129748	78139706,78138924,78138098,78137883,78136990,78133448,78131773	Gene ID= ENSG00000187325.4 TPM= 29.19 Transcript Type= protein_coding
chrX	78271480	78327691	78271480	78327691	-	ENST00000614798.1@CYSLTR1	ENST00000614798.1	protein_coding	78327305,78271480	78327691,78273773	Gene ID= ENSG00000173198.5 TPM= 1.17 Transcript Type= protein_coding
chrX	78271464	78327483	78271464	78327483	-	ENST00000373304.3@CYSLTR1	ENST00000373304.3	protein_coding	78327305,78283454,78271464	78327483,78283540,78273773	Gene ID= ENSG00000173198.5 TPM= 2.34 Transcript Type= protein_coding
chrX	79144710	79175315	79144710	79175315	+	transcript1817.chrX.nnic@GPR174	transcript1817.chrX.nnic	protein_coding	79144710,79156822,79170452	79145217,79156918,79175315	Gene ID= ENSG00000147138.1 TPM= 2.34 Transcript Type= NA
chrX	79360384	79367576	79360384	79367576	-	transcript1820.chrX.nic@ITM2A	transcript1820.chrX.nic	protein_coding	79367547,79367105,79363423,79362942,79362581,79361329,79360384	79367576,79367273,79363554,79363139,79362691,79361479,79361177	Gene ID= ENSG00000078596.10 TPM= 4.47 Transcript Type= NA
chrX	79360384	79367359	79360384	79367359	-	ENST00000373298.6@ITM2A	ENST00000373298.6	protein_coding	79367105,79363423,79362942,79362581,79361329,79360384	79367359,79363554,79363139,79362691,79361479,79361177	Gene ID= ENSG00000078596.10 TPM= 40.67 Transcript Type= protein_coding
chrX	79360388	79367552	79360388	79367552	-	ENST00000434584.2@ITM2A	ENST00000434584.2	protein_coding	79367105,79362942,79362581,79361329,79360388	79367552,79363139,79362691,79361479,79361177	Gene ID= ENSG00000078596.10 TPM= 2.72 Transcript Type= protein_coding
chrX	80670854	80809688	80670854	80809688	-	ENST00000373275.4@BRWD3	ENST00000373275.4	protein_coding	80809441,80809246,80809013,80808539,80793622,80791854,80745569,80744032,80735988,80735127,80734118,80733456,80729916,80728752,80724933,80723748,80722562,80719489,80717573,80716157,80709428,80707427,80704678,80703480,80699957,80696739,80695908,80692940,80692089,80691823,80691053,80689967,80689768,80688069,80686863,80685462,80684010,80682465,80681997,80681341,80670854	80809688,80809304,80809042,80808598,80793772,80791952,80745729,80744253,80736088,80735197,80734218,80733496,80730020,80728905,80725067,80723876,80722787,80719656,80717759,80716250,80709577,80707503,80704846,80703593,80700064,80696863,80695990,80693051,80692150,80691978,80691173,80690092,80689846,80688125,80687003,80685536,80684162,80682628,80682094,80681499,80677363	Gene ID= ENSG00000165288.10 TPM= 3.5 Transcript Type= protein_coding
chrX	81114068	81202318	81114068	81202318	-	transcript1828.chrX.nic@HMGN5	transcript1828.chrX.nic	protein_coding	81201737,81195118,81121535,81119788,81118730,81118432,81116204,81114068	81202318,81195297,81121672,81119817,81118759,81118485,81116341,81115230	Gene ID= ENSG00000198157.10 TPM= 3.5 Transcript Type= NA
chrX	81202377	81298547	81202377	81298547	+	transcript1834.chrX.nic@SH3BGRL	transcript1834.chrX.nic	protein_coding	81202377,81276984,81278331,81297195	81202576,81277169,81278411,81298547	Gene ID= ENSG00000131171.12 TPM= 22.18 Transcript Type= NA
chrX	81202094	81281131	81202094	81281131	+	transcript1836.chrX.nic@SH3BGRL	transcript1836.chrX.nic	protein_coding	81202094,81276984,81278331	81202245,81277169,81281131	Gene ID= ENSG00000131171.12 TPM= 4.67 Transcript Type= NA
chrX	81201943	81298547	81201943	81298547	+	ENST00000373212.5@SH3BGRL	ENST00000373212.5	protein_coding	81201943,81276984,81278331,81297195	81202245,81277169,81278411,81298547	Gene ID= ENSG00000131171.12 TPM= 158.79 Transcript Type= protein_coding
chrX	85089170	85089979	85089170	85089979	+	transcript1842.chrX.nnic@NA	transcript1842.chrX.nnic	NA	85089170	85089979	Gene ID= novel_gene_chrX_1843 TPM= 2.34 Transcript Type= NA
chrX	85244032	85273360	85244032	85273360	+	ENST00000373165.7@ZNF711	ENST00000373165.7	protein_coding	85244032,85245903,85247547,85255259,85264275,85265118,85268294,85270003,85270651	85244191,85246022,85247651,85255801,85264430,85265255,85268341,85270146,85273360	Gene ID= ENSG00000147180.16 TPM= 2.34 Transcript Type= protein_coding
chrX	85277396	85379665	85277396	85379665	-	transcript1849.chrX.nnic@POF1B	transcript1849.chrX.nnic	protein_coding	85379639,85379173,85367692,85359550,85351350,85345860,85330949,85315707,85314432,85308124,85307163,85306181,85305791,85304343,85303406,85282203,85277396	85379665,85379495,85367766,85359630,85351451,85345997,85331079,85315734,85314506,85308216,85307276,85306333,85305910,85304471,85303488,85282317,85279426	Gene ID= ENSG00000124429.17 TPM= 3.5 Transcript Type= NA
chrX	85277396	85379743	85277396	85379743	-	ENST00000262753.8@POF1B	ENST00000262753.8	protein_coding	85379639,85379173,85367692,85359550,85351350,85345860,85330949,85315707,85314432,85308124,85307163,85306181,85305791,85304343,85303406,85282203,85277396	85379743,85379495,85367766,85359630,85351451,85346042,85331079,85315734,85314506,85308216,85307276,85306333,85305910,85304471,85303488,85282317,85279426	Gene ID= ENSG00000124429.17 TPM= 3.5 Transcript Type= protein_coding
chrX	85861180	86047562	85861180	86047562	-	ENST00000357749.6@CHM	ENST00000357749.6	protein_coding	86047484,86027491,85981737,85978767,85963665,85958861,85957855,85956153,85911261,85901084,85900646,85894188,85878965,85873052,85861180	86047562,86027557,85981809,85978891,85964052,85958977,85957975,85956378,85911338,85901188,85900709,85894284,85879063,85873212,85864821	Gene ID= ENSG00000188419.13 TPM= 7.01 Transcript Type= protein_coding
chrX	93670930	93673568	93670930	93673568	-	ENST00000373079.3@NAP1L3	ENST00000373079.3	protein_coding	93670930	93673568	Gene ID= ENSG00000186310.9 TPM= 2.34 Transcript Type= protein_coding
chrX	94565697	94566650	94565697	94566650	-	transcript1861.chrX.nnic@NA	transcript1861.chrX.nnic	NA	94565697	94566650	Gene ID= novel_gene_chrX_1862 TPM= 3.5 Transcript Type= NA
chrX	94942849	94944913	94942849	94944913	+	transcript1865.chrX.nnic@NA	transcript1865.chrX.nnic	NA	94942849	94944913	Gene ID= novel_gene_chrX_1866 TPM= 2.34 Transcript Type= NA
chrX	96684842	97469835	96684842	97469835	+	transcript1868.chrX.nic@DIAPH2	transcript1868.chrX.nic	protein_coding	96684842,96735758,96738586,96758154,96763100,96881579,96912328,96912483,96916438,96918509,96930733,96937233,96939266,96942018,96945527,96948935,96957828,96965093,97072941,97075167,97099694,97114726,97141665,97247715,97348116,97383909,97429650,97469694	96685190,96735790,96738762,96758258,96763120,96881718,96912402,96912552,96916574,96918617,96930843,96937351,96939382,96942136,96945591,96949039,96958148,96965207,97073042,97075261,97099795,97114965,97141794,97247839,97348280,97384044,97429745,97469835	Gene ID= ENSG00000147202.17 TPM= 11.09 Transcript Type= NA
chrX	96684659	97469835	96684659	97469835	+	transcript1878.chrX.nnic@DIAPH2	transcript1878.chrX.nnic	protein_coding	96684659,96738586,96758154,96881579,96912328,96912483,96916438,96918509,96930733,96937233,96939266,96942018,96945527,96948935,96957828,96965093,97072941,97075167,97099694,97114726,97141665,97247715,97348116,97383909,97429650,97469694	96685190,96738762,96758258,96881718,96912402,96912552,96916574,96918617,96930843,96937351,96939382,96942136,96945591,96949039,96958148,96965207,97073042,97075261,97099795,97114965,97141794,97247839,97348280,97384044,97429745,97469835	Gene ID= ENSG00000147202.17 TPM= 4.09 Transcript Type= NA
chrX	100644139	100671295	100644139	100671295	+	transcript1908.chrX.nic@SRPX2	transcript1908.chrX.nic	protein_coding	100644139,100646193,100650785,100662152,100664774,100665243,100665536,100666754,100667274,100669248,100670807	100644515,100646404,100650865,100662367,100664950,100665369,100665657,100666933,100667407,100669369,100671295	Gene ID= ENSG00000102359.6 TPM= 5.84 Transcript Type= NA
chrX	100644166	100675788	100644166	100675788	+	ENST00000373004.4@SRPX2	ENST00000373004.4	protein_coding	100644166,100646193,100650785,100662176,100664774,100665243,100665536,100666754,100667274,100669248,100670807	100644515,100646404,100650865,100662367,100664950,100665369,100665657,100666933,100667407,100669369,100675788	Gene ID= ENSG00000102359.6 TPM= 17.51 Transcript Type= protein_coding
chrX	100657351	100660652	100657351	100660652	-	transcript1913.chrX.nnic@NA	transcript1913.chrX.nnic	NA	100657351	100660652	Gene ID= novel_gene_chrX_1914 TPM= 9.34 Transcript Type= NA
chrX	100674491	100732126	100674491	100732126	-	transcript1896.chrX.nnic@SYTL4	transcript1896.chrX.nnic	protein_coding	100732004,100704811,100703093,100701928,100701458,100701220,100700897,100691108,100690563,100690075,100689856,100688351,100687067,100686679,100685990,100681227,100679313,100678391,100674491	100732126,100704886,100703185,100702107,100701673,100701329,100700999,100691209,100690638,100690165,100689959,100688443,100687245,100686781,100686151,100681335,100679412,100678599,100676176	Gene ID= ENSG00000102362.15 TPM= 7.01 Transcript Type= NA
chrX	100675791	100732123	100675791	100732123	-	transcript1903.chrX.nnic@SYTL4	transcript1903.chrX.nnic	protein_coding	100732004,100703093,100701928,100701458,100701220,100700897,100691108,100690563,100690075,100689856,100688351,100687067,100686679,100685990,100681227,100679313,100678391,100675791	100732123,100703185,100702107,100701673,100701329,100700999,100691209,100690638,100690165,100689959,100688443,100687245,100686781,100686151,100681335,100679412,100678599,100676176	Gene ID= ENSG00000102362.15 TPM= 2.34 Transcript Type= NA
chrX	100820385	100838796	100820385	100838796	+	transcript1920.chrX.nic@CSTF2	transcript1920.chrX.nic	protein_coding	100820385,100821527,100822251,100823292,100823886,100824120,100826634,100828040,100831515,100832734,100833180,100837339,100838239	100820474,100821605,100822420,100823428,100824005,100824257,100826757,100828102,100831656,100832909,100833472,100837449,100838796	Gene ID= ENSG00000101811.13 TPM= 2.34 Transcript Type= NA
chrX	100820401	100840918	100820401	100840918	+	ENST00000372972.6@CSTF2	ENST00000372972.6	protein_coding	100820401,100821527,100822251,100823292,100823886,100824120,100826634,100828040,100831515,100832734,100833180,100837339,100838239,100840714	100820474,100821605,100822420,100823428,100824005,100824257,100826757,100828102,100831656,100832909,100833472,100837449,100838364,100840918	Gene ID= ENSG00000101811.13 TPM= 15.18 Transcript Type= protein_coding
chrX	101078720	101096364	101078720	101096364	+	ENST00000372930.4@TMEM35A	ENST00000372930.4	protein_coding	101078720,101094573	101079122,101096364	Gene ID= ENSG00000126950.7 TPM= 5.84 Transcript Type= protein_coding
chrX	101345661	101349196	101345661	101349196	-	ENST00000372902.3@TIMM8A	ENST00000372902.3	protein_coding	101348533,101345661	101349196,101346660	Gene ID= ENSG00000126953.5 TPM= 1.17 Transcript Type= protein_coding
chrX	101349450	101386195	101349450	101386195	-	ENST00000308731.7@BTK	ENST00000308731.7	protein_coding	101386062,101375144,101374536,101371633,101369998,101362561,101362173,101360568,101360088,101359293,101358617,101358310,101357509,101356784,101356052,101354630,101353870,101353194,101349450	101386195,101375314,101374634,101371701,101370079,101362689,101362240,101360755,101360150,101359347,101358696,101358437,101357583,101356955,101356268,101354694,101353988,101353351,101349956	Gene ID= ENSG00000010671.15 TPM= 57.21 Transcript Type= protein_coding
chrX	101349450	101386199	101349450	101386199	-	transcript1949.chrX.nic@BTK	transcript1949.chrX.nic	protein_coding	101386062,101375144,101374536,101371633,101369998,101362561,101362173,101360568,101360088,101359293,101358617,101358310,101357509,101356784,101353870,101353194,101349450	101386199,101375314,101374634,101371701,101370079,101362689,101362240,101360755,101360150,101359347,101358696,101358437,101357583,101356955,101356268,101353351,101349956	Gene ID= ENSG00000010671.15 TPM= 4.67 Transcript Type= NA
chrX	101390983	101395795	101390983	101395795	+	ENST00000553110.7@RPL36A	ENST00000553110.7	protein_coding	101390983,101391459,101391755,101395335,101395728	101391046,101391564,101391822,101395457,101395795	Gene ID= ENSG00000241343.9 TPM= 4.67 Transcript Type= protein_coding
chrX	101397807	101407933	101397807	101407933	-	transcript1956.chrX.nic@GLA	transcript1956.chrX.nic	protein_coding	101407710,101403811,101401632,101400666,101399744,101398370,101397807	101407933,101403985,101401809,101400757,101399800,101398946,101398099	Gene ID= ENSG00000102393.9 TPM= 4.09 Transcript Type= NA
chrX	101397803	101407925	101397803	101407925	-	ENST00000218516.3@GLA	ENST00000218516.3	protein_coding	101407710,101403811,101401632,101400666,101398785,101398370,101397803	101407925,101403985,101401809,101400757,101398946,101398567,101398099	Gene ID= ENSG00000102393.9 TPM= 26.27 Transcript Type= protein_coding
chrX	101408181	101414133	101408181	101414133	+	transcript1963.chrX.nnic@HNRNPH2	transcript1963.chrX.nnic	protein_coding	101408181,101411936	101408307,101414133	Gene ID= ENSG00000126945.8 TPM= 22.18 Transcript Type= NA
chrX	101408295	101414133	101408295	101414133	+	ENST00000316594.5@HNRNPH2	ENST00000316594.5	protein_coding	101408295,101411936	101408319,101414133	Gene ID= ENSG00000126945.8 TPM= 23.35 Transcript Type= protein_coding
chrX	101425395	101429015	101425395	101429015	-	transcript1981.chrX.nnic@NA	transcript1981.chrX.nnic	NA	101425395	101429015	Gene ID= novel_gene_chrX_1982 TPM= 3.5 Transcript Type= NA
chrX	101550531	101554700	101550531	101554700	+	ENST00000372829.7@ARMCX1	ENST00000372829.7	protein_coding	101550531,101550971,101551569,101552809	101550660,101551024,101551633,101554700	Gene ID= ENSG00000126947.12 TPM= 54.88 Transcript Type= protein_coding
chrX	101615120	101618001	101615120	101618001	-	ENST00000361910.8@ARMCX6	ENST00000361910.8	protein_coding	101617885,101617503,101615120	101618001,101617584,101616766	Gene ID= ENSG00000198960.10 TPM= 21.02 Transcript Type= protein_coding
chrX	101615118	101617910	101615118	101617910	-	ENST00000497931.5@ARMCX6	ENST00000497931.5	protein_coding	101617885,101617503,101616672,101615118	101617910,101617584,101616766,101615760	Gene ID= ENSG00000198960.10 TPM= 4.67 Transcript Type= processed_transcript
chrX	101623089	101626484	101623089	101626484	+	ENST00000471229.6@ARMCX3	ENST00000471229.6	protein_coding	101623089,101623814,101624158,101624480,101624834	101623276,101623893,101624218,101624550,101626484	Gene ID= ENSG00000102401.19 TPM= 28.02 Transcript Type= protein_coding
chrX	101622797	101627843	101622797	101627843	+	ENST00000341189.8@ARMCX3	ENST00000341189.8	protein_coding	101622797,101623786,101624158,101624480,101624834	101623276,101623893,101624218,101624550,101627843	Gene ID= ENSG00000102401.19 TPM= 75.31 Transcript Type= protein_coding
chrX	101623145	101627843	101623145	101627843	+	transcript2000.chrX.nic@ARMCX3	transcript2000.chrX.nic	protein_coding	101623145,101624158,101624480,101624834	101623893,101624218,101624550,101627843	Gene ID= ENSG00000102401.19 TPM= 8.76 Transcript Type= NA
chrX	101655281	101659863	101655281	101659863	-	transcript2006.chrX.nic@ARMCX2	transcript2006.chrX.nic	protein_coding	101659758,101659419,101659076,101658461,101658073,101655281	101659863,101659501,101659136,101658569,101658142,101657715	Gene ID= ENSG00000184867.13 TPM= 8.17 Transcript Type= NA
chrX	101655281	101659863	101655281	101659863	-	transcript2008.chrX.nic@ARMCX2	transcript2008.chrX.nic	protein_coding	101659758,101659419,101659076,101658492,101658073,101655281	101659863,101659501,101659148,101658569,101658142,101657715	Gene ID= ENSG00000184867.13 TPM= 5.84 Transcript Type= NA
chrX	101655467	101659891	101655467	101659891	-	ENST00000356824.8@ARMCX2	ENST00000356824.8	protein_coding	101659758,101659419,101659076,101658461,101658073,101655467	101659891,101659501,101659148,101658525,101658142,101657715	Gene ID= ENSG00000184867.13 TPM= 2.34 Transcript Type= protein_coding
chrX	101882658	101890221	101882658	101890221	-	ENST00000494068.1@ZMAT1	ENST00000494068.1	protein_coding	101886632,101882658	101890221,101884821	Gene ID= ENSG00000166432.14 TPM= 1.17 Transcript Type= processed_transcript
chrX	102125688	102127711	102125688	102127711	+	ENST00000372780.5@TCEAL2	ENST00000372780.5	protein_coding	102125688,102126373,102126804	102125806,102126445,102127711	Gene ID= ENSG00000184905.8 TPM= 5.84 Transcript Type= protein_coding
chrX	102334844	102339366	102334844	102339366	-	transcript2023.chrX.nnic@NA	transcript2023.chrX.nnic	NA	102334844	102339366	Gene ID= novel_gene_chrX_2024 TPM= 2.34 Transcript Type= NA
chrX	102513676	102516784	102513676	102516784	-	ENST00000289373.4@TMSB15A	ENST00000289373.4	protein_coding	102516666,102515064,102513676	102516784,102515180,102514124	Gene ID= ENSG00000158164.6 TPM= 2.34 Transcript Type= protein_coding
chrX	102599168	102604159	102599168	102604159	+	ENST00000246174.6@ARMCX5	ENST00000246174.6	protein_coding	102599168,102599348,102599712,102600920,102601464,102601880	102599266,102599572,102599847,102601032,102601509,102604159	Gene ID= ENSG00000125962.14 TPM= 3.5 Transcript Type= protein_coding
chrX	102712868	102717733	102712868	102717733	+	transcript2046.chrX.nnic@ARMCX5-GPRASP2	transcript2046.chrX.nnic	processed_transcript	102712868,102713782,102714189,102714537	102713006,102713849,102714266,102717733	Gene ID= ENSG00000271147.7 TPM= 9.34 Transcript Type= NA
chrX	102599526	102650145	102599526	102650145	+	ENST00000466616.5@ARMCX5-GPRASP2	ENST00000466616.5	processed_transcript	102599526,102601464,102601880,102605482,102639400,102649954	102599847,102601509,102601977,102605653,102639533,102650145	Gene ID= ENSG00000271147.7 TPM= 1.17 Transcript Type= processed_transcript
chrX	102651366	102659083	102651366	102659083	+	ENST00000361600.9@GPRASP1	ENST00000361600.9	protein_coding	102651366,102652175,102652831,102653221,102653580	102651595,102652265,102652898,102653298,102659083	Gene ID= ENSG00000198932.12 TPM= 1.17 Transcript Type= protein_coding
chrX	102712845	102717733	102712845	102717733	+	transcript2037.chrX.nnic@GPRASP2	transcript2037.chrX.nnic	protein_coding	102712845,102713130,102713782,102714189,102714537	102713006,102713217,102713849,102714266,102717733	Gene ID= ENSG00000158301.18 TPM= 5.25 Transcript Type= NA
chrX	102712432	102717733	102712432	102717733	+	transcript2045.chrX.nic@GPRASP2	transcript2045.chrX.nic	protein_coding	102712432,102713782,102714189,102714537	102713217,102713849,102714266,102717733	Gene ID= ENSG00000158301.18 TPM= 8.76 Transcript Type= NA
chrX	102720726	102752441	102720726	102752441	+	ENST00000361229.8@BHLHB9	ENST00000361229.8	protein_coding	102720726,102720957,102748699	102720821,102721091,102752441	Gene ID= ENSG00000198908.11 TPM= 1.17 Transcript Type= protein_coding
chrX	103062651	103064240	103062651	103064240	-	ENST00000372728.3@BEX1	ENST00000372728.3	protein_coding	103064096,103063642,103062651	103064240,103063731,103063279	Gene ID= ENSG00000133169.5 TPM= 2.34 Transcript Type= protein_coding
chrX	103075824	103093169	103075824	103093169	-	transcript2057.chrX.nic@NXF3	transcript2057.chrX.nic	protein_coding	103092996,103084715,103084342,103083609,103083398,103083193,103083004,103082760,103080576,103080148,103080013,103079763,103079584,103079359,103079221,103078560,103077614,103076241,103075824	103093169,103084883,103084495,103083692,103083502,103083273,103083073,103082848,103082364,103080216,103080068,103079870,103079642,103079474,103079263,103078632,103077746,103076301,103076000	Gene ID= ENSG00000147206.16 TPM= 9.34 Transcript Type= NA
chrX	103075810	103093125	103075810	103093125	-	ENST00000395065.7@NXF3	ENST00000395065.7	protein_coding	103092996,103084715,103084342,103083609,103083398,103083193,103083004,103082760,103082255,103080576,103080148,103080013,103079763,103079584,103079359,103079221,103078560,103077614,103076241,103075810	103093125,103084883,103084495,103083692,103083502,103083273,103083073,103082848,103082364,103080612,103080216,103080068,103079870,103079642,103079474,103079263,103078632,103077746,103076301,103076000	Gene ID= ENSG00000147206.16 TPM= 11.68 Transcript Type= protein_coding
chrX	103215092	103217246	103215092	103217246	+	ENST00000372695.5@BEX4	ENST00000372695.5	protein_coding	103215092,103215682,103216149	103215238,103215764,103217246	Gene ID= ENSG00000102409.9 TPM= 63.05 Transcript Type= protein_coding
chrX	103215098	103217193	103215098	103217193	+	transcript2063.chrX.nnic@NA	transcript2063.chrX.nnic	NA	103215098	103217193	Gene ID= novel_gene_chrX_2064 TPM= 8.17 Transcript Type= NA
chrX	103252995	103255203	103252995	103255203	-	ENST00000372685.7@TCEAL8	ENST00000372685.7	protein_coding	103255078,103254605,103252995	103255203,103254677,103254017	Gene ID= ENSG00000180964.16 TPM= 28.61 Transcript Type= protein_coding
chrX	103252995	103255185	103252995	103255185	-	ENST00000360000.8@TCEAL8	ENST00000360000.8	protein_coding	103255078,103252995	103255185,103254017	Gene ID= ENSG00000180964.16 TPM= 6.42 Transcript Type= protein_coding
chrX	103309346	103311046	103309346	103311046	-	ENST00000372677.7@BEX2	ENST00000372677.7	protein_coding	103310860,103310358,103309346	103311046,103310433,103309981	Gene ID= ENSG00000133134.11 TPM= 10.89 Transcript Type= protein_coding
chrX	103309346	103310978	103309346	103310978	-	transcript2071.chrX.nic@BEX2	transcript2071.chrX.nic	protein_coding	103310358,103309346	103310978,103309981	Gene ID= ENSG00000133134.11 TPM= 5.06 Transcript Type= NA
chrX	103309354	103310955	103309354	103310955	-	ENST00000536889.1@BEX2	ENST00000536889.1	protein_coding	103310583,103310358,103309354	103310955,103310433,103309981	Gene ID= ENSG00000133134.11 TPM= 3.89 Transcript Type= protein_coding
chrX	103330196	103332326	103330196	103332326	+	ENST00000332431.4@TCEAL7	ENST00000332431.4	protein_coding	103330196,103330923,103331377	103330304,103331040,103332326	Gene ID= ENSG00000182916.7 TPM= 3.5 Transcript Type= protein_coding
chrX	103356452	103358451	103356452	103358451	+	ENST00000372661.4@TCEAL9	ENST00000372661.4	protein_coding	103356452,103357083,103357615	103356606,103357161,103358451	Gene ID= ENSG00000185222.8 TPM= 51.37 Transcript Type= protein_coding
chrX	103356452	103358451	103356452	103358451	+	ENST00000372656.4@TCEAL9	ENST00000372656.4	protein_coding	103356452,103357615	103356606,103358451	Gene ID= ENSG00000185222.8 TPM= 3.5 Transcript Type= protein_coding
chrX	103356516	103358457	103356516	103358457	+	transcript2075.chrX.nnic@NA	transcript2075.chrX.nnic	NA	103356516	103358457	Gene ID= novel_gene_chrX_2076 TPM= 2.34 Transcript Type= NA
chrX	103376340	103378077	103376340	103378077	+	ENST00000361298.8@BEX3	ENST00000361298.8	protein_coding	103376340,103377028,103377510	103376613,103377106,103378077	Gene ID= ENSG00000166681.13 TPM= 81.53 Transcript Type= protein_coding
chrX	103376395	103378077	103376395	103378077	+	ENST00000372645.3@BEX3	ENST00000372645.3	protein_coding	103376395,103377028,103377463	103376613,103377106,103378077	Gene ID= ENSG00000166681.13 TPM= 19.07 Transcript Type= protein_coding
chrX	103376916	103378071	103376916	103378071	+	ENST00000372634.1@BEX3	ENST00000372634.1	protein_coding	103376916,103377510	103377106,103378071	Gene ID= ENSG00000166681.13 TPM= 7.97 Transcript Type= protein_coding
chrX	103431537	103500858	103431537	103500858	+	transcript2082.chrX.nnic@Z69733.1	transcript2082.chrX.nnic	antisense_RNA	103431537,103449274,103450497,103461215,103486389,103491214,103497435,103499777	103431918,103449410,103450660,103461354,103486459,103491370,103497613,103500858	Gene ID= ENSG00000234405.1 TPM= 2.34 Transcript Type= NA
chrX	103585492	103587518	103585492	103587518	+	ENST00000468024.5@TCEAL4	ENST00000468024.5	protein_coding	103585492,103586219,103586649	103585683,103586291,103587518	Gene ID= ENSG00000133142.17 TPM= 7.59 Transcript Type= protein_coding
chrX	103585533	103587694	103585533	103587694	+	ENST00000472745.1@TCEAL4	ENST00000472745.1	protein_coding	103585533,103585859,103586649	103585624,103586291,103587694	Gene ID= ENSG00000133142.17 TPM= 3.5 Transcript Type= protein_coding
chrX	103585563	103587526	103585563	103587526	+	ENST00000494801.5@TCEAL4	ENST00000494801.5	protein_coding	103585563,103586219,103586654	103585624,103586291,103587526	Gene ID= ENSG00000133142.17 TPM= 64.8 Transcript Type= protein_coding
chrX	103607906	103609926	103607906	103609926	+	ENST00000243286.7@TCEAL3	ENST00000243286.7	protein_coding	103607906,103608604,103609038	103608070,103608673,103609926	Gene ID= ENSG00000196507.10 TPM= 14.01 Transcript Type= protein_coding
chrX	103607906	103609927	103607906	103609927	+	ENST00000372627.9@TCEAL3	ENST00000372627.9	protein_coding	103607906,103608604,103609038	103608058,103608673,103609927	Gene ID= ENSG00000196507.10 TPM= 35.03 Transcript Type= protein_coding
chrX	103629464	103630953	103629464	103630953	+	transcript2107.chrX.nic@TCEAL1	transcript2107.chrX.nic	protein_coding	103629464,103629885	103629561,103630953	Gene ID= ENSG00000172465.13 TPM= 4.09 Transcript Type= NA
chrX	103628974	103630953	103628974	103630953	+	ENST00000372625.7@TCEAL1	ENST00000372625.7	protein_coding	103628974,103629494,103629885	103629025,103629573,103630953	Gene ID= ENSG00000172465.13 TPM= 4.09 Transcript Type= protein_coding
chrX	103675496	103686715	103675496	103686715	-	transcript2110.chrX.nic@MORF4L2	transcript2110.chrX.nic	protein_coding	103686631,103685171,103684681,103678499,103675496	103686715,103685260,103684729,103678600,103677051	Gene ID= ENSG00000123562.16 TPM= 6.71 Transcript Type= NA
chrX	103675500	103686818	103675500	103686818	-	ENST00000422154.6@MORF4L2	ENST00000422154.6	protein_coding	103686631,103685171,103678499,103675500	103686818,103685260,103678651,103677051	Gene ID= ENSG00000123562.16 TPM= 10.22 Transcript Type= protein_coding
chrX	103675500	103688158	103675500	103688158	-	ENST00000433176.6@MORF4L2	ENST00000433176.6	protein_coding	103687989,103685171,103678499,103675500	103688158,103685260,103678651,103677051	Gene ID= ENSG00000123562.16 TPM= 11.38 Transcript Type= protein_coding
chrX	103675496	103688064	103675496	103688064	-	ENST00000360458.5@MORF4L2	ENST00000360458.5	protein_coding	103687989,103685171,103678499,103675496	103688064,103685260,103678600,103677051	Gene ID= ENSG00000123562.16 TPM= 37.07 Transcript Type= protein_coding
chrX	103676721	103679883	103676721	103679883	+	transcript2120.chrX.nnic@NA	transcript2120.chrX.nnic	NA	103676721	103679883	Gene ID= novel_gene_chrX_2121 TPM= 3.5 Transcript Type= NA
chrX	103822322	103832228	103822322	103832228	-	ENST00000243298.2@RAB9B	ENST00000243298.2	protein_coding	103832060,103827005,103822322	103832228,103827078,103825826	Gene ID= ENSG00000123570.3 TPM= 5.84 Transcript Type= protein_coding
chrX	104112544	104115842	104112544	104115842	+	ENST00000422784.5@ZCCHC18	ENST00000422784.5	protein_coding	104112544,104113195,104113434,104115252	104113001,104113246,104113573,104115842	Gene ID= ENSG00000166707.10 TPM= 1.17 Transcript Type= processed_transcript
chrX	104119535	104123714	104119535	104123714	-	transcript2138.chrX.nnic@NA	transcript2138.chrX.nnic	NA	104119535	104123714	Gene ID= novel_gene_chrX_2139 TPM= 3.5 Transcript Type= NA
chrX	104166495	104176475	104166495	104176475	+	transcript2141.chrX.nic@FAM199X	transcript2141.chrX.nic	protein_coding	104166495,104175623	104166982,104176475	Gene ID= ENSG00000123575.8 TPM= 2.34 Transcript Type= NA
chrX	106168305	106208956	106168305	106208956	+	ENST00000357175.6@MUM1L1	ENST00000357175.6	protein_coding	106168305,106171012,106203985,106205219	106168425,106171139,106204170,106208956	Gene ID= ENSG00000157502.13 TPM= 2.34 Transcript Type= protein_coding
chrX	106726664	106796993	106726664	106796993	+	ENST00000255499.2@RNF128	ENST00000255499.2	protein_coding	106726664,106772913,106785065,106787918,106790186,106791066,106795580	106727397,106773160,106785136,106788000,106790282,106791234,106796993	Gene ID= ENSG00000133135.13 TPM= 77.06 Transcript Type= protein_coding
chrX	106802680	106876145	106802680	106876145	+	ENST00000357242.9@TBC1D8B	ENST00000357242.9	protein_coding	106802680,106818663,106820877,106821977,106823226,106826030,106827170,106839308,106840048,106840670,106848186,106850025,106853521,106854198,106865559,106865793,106866797,106868393,106869485,106870716,106873570	106802983,106818773,106820995,106822202,106823466,106826237,106827337,106839457,106840198,106840884,106848303,106850310,106853650,106854296,106865627,106866033,106866862,106868476,106869541,106870813,106876145	Gene ID= ENSG00000133138.19 TPM= 5.84 Transcript Type= protein_coding
chrX	106940734	107000274	106940734	107000274	-	transcript2156.chrX.nnic@MORC4	transcript2156.chrX.nnic	protein_coding	106999868,106993230,106985983,106985096,106981345,106980891,106978080,106976584,106962012,106958336,106956936,106956480,106954913,106942515,106941938,106940734	107000274,106993362,106986200,106985243,106981477,106981019,106978199,106976684,106962110,106958464,106957004,106956534,106955088,106943205,106942221,106941632	Gene ID= ENSG00000133131.14 TPM= 5.84 Transcript Type= NA
chrX	106940734	107000099	106940734	107000099	-	transcript2157.chrX.nic@MORC4	transcript2157.chrX.nic	protein_coding	106999868,106999677,106993230,106985983,106985096,106981345,106980891,106978080,106976584,106962012,106958336,106956936,106956480,106954913,106942515,106940734	107000099,106999749,106993362,106986200,106985243,106981477,106981019,106978199,106976684,106962110,106958464,106957004,106956534,106955088,106943205,106942221	Gene ID= ENSG00000133131.14 TPM= 3.5 Transcript Type= NA
chrX	106940740	107000274	106940740	107000274	-	transcript2159.chrX.nnic@MORC4	transcript2159.chrX.nnic	protein_coding	106999868,106993230,106985983,106985096,106981345,106980891,106978080,106976584,106962012,106958336,106956936,106956480,106954913,106942515,106941976,106940740	107000274,106993362,106986200,106985243,106981477,106981019,106978199,106976684,106962110,106958464,106957004,106956534,106955088,106943205,106942221,106941632	Gene ID= ENSG00000133131.14 TPM= 7.01 Transcript Type= NA
chrX	106940734	107000276	106940734	107000276	-	transcript2162.chrX.nnic@MORC4	transcript2162.chrX.nnic	protein_coding	106999868,106999677,106993230,106981345,106980891,106978080,106976584,106962012,106958336,106956936,106956480,106954913,106942515,106941938,106940734	107000276,106999749,106993362,106981477,106981019,106978199,106976684,106962110,106958464,106957004,106956534,106955088,106943205,106942221,106941632	Gene ID= ENSG00000133131.14 TPM= 2.34 Transcript Type= NA
chrX	106940734	107000244	106940734	107000244	-	ENST00000355610.8@MORC4	ENST00000355610.8	protein_coding	106999868,106999677,106993230,106985983,106985096,106981345,106980891,106978080,106976584,106962012,106958336,106956936,106956480,106954913,106942515,106941938,106940734	107000244,106999749,106993362,106986200,106985243,106981477,106981019,106978199,106976684,106962110,106958464,106957004,106956534,106955088,106943205,106942221,106941632	Gene ID= ENSG00000133131.14 TPM= 24.52 Transcript Type= protein_coding
chrX	107063953	107118827	107063953	107118827	-	transcript2164.chrX.nic@RBM41	transcript2164.chrX.nic	protein_coding	107118766,107116650,107115862,107115352,107113397,107088436,107069255,107067556,107063953	107118827,107116766,107116054,107115556,107113468,107088839,107069402,107067693,107065758	Gene ID= ENSG00000089682.16 TPM= 3.5 Transcript Type= NA
chrX	107628507	107651026	107628507	107651026	+	ENST00000372435.8@PRPS1	ENST00000372435.8	protein_coding	107628507,107639295,107640902,107642366,107645177,107647606,107649940	107628750,107639478,107641000,107642490,107645350,107647765,107651026	Gene ID= ENSG00000147224.10 TPM= 4.67 Transcript Type= protein_coding
chrX	107670506	107670702	107670506	107670702	+	transcript2175.chrX.nnic@NA	transcript2175.chrX.nnic	NA	107670506	107670702	Gene ID= novel_gene_chrX_2176 TPM= 2.34 Transcript Type= NA
chrX	107713224	107775988	107713224	107775988	-	ENST00000372384.6@TSC22D3	ENST00000372384.6	protein_coding	107775780,107775100,107715899,107713224	107775988,107775511,107715950,107714749	Gene ID= ENSG00000157514.16 TPM= 4.99 Transcript Type= protein_coding
chrX	107713221	107775985	107713221	107775985	-	ENST00000315660.8@TSC22D3	ENST00000315660.8	protein_coding	107775780,107775100,107715899,107713221	107775985,107775525,107715950,107714749	Gene ID= ENSG00000157514.16 TPM= 3.23 Transcript Type= protein_coding
chrX	107713221	107716545	107713221	107716545	-	ENST00000372390.8@TSC22D3	ENST00000372390.8	protein_coding	107716315,107715899,107713221	107716545,107715950,107714749	Gene ID= ENSG00000157514.16 TPM= 11.41 Transcript Type= protein_coding
chrX	107713221	107717135	107713221	107717135	-	ENST00000372397.6@TSC22D3	ENST00000372397.6	protein_coding	107716690,107715899,107713221	107717135,107715950,107714749	Gene ID= ENSG00000157514.16 TPM= 653 Transcript Type= protein_coding
chrX	107713224	107775787	107713224	107775787	-	ENST00000372383.8@TSC22D3	ENST00000372383.8	protein_coding	107775100,107715899,107713224	107775787,107715950,107714749	Gene ID= ENSG00000157514.16 TPM= 40.01 Transcript Type= protein_coding
chrX	107713222	107717078	107713222	107717078	-	transcript2190.chrX.nnic@NA	transcript2190.chrX.nnic	NA	107713222	107717078	Gene ID= novel_gene_chrX_2191 TPM= 50.21 Transcript Type= NA
chrX	107825694	107927193	107825694	107927193	+	transcript2192.chrX.nic@MID2	transcript2192.chrX.nic	protein_coding	107825694,107840670,107854609,107903958,107905478,107916002,107917506,107924343,107926094,107926671	107825800,107841385,107854704,107904065,107905626,107916129,107917649,107924504,107926301,107927193	Gene ID= ENSG00000080561.13 TPM= 3.5 Transcript Type= NA
chrX	107825879	107927193	107825879	107927193	+	ENST00000262843.10@MID2	ENST00000262843.10	protein_coding	107825879,107840670,107854609,107903958,107905478,107916002,107917506,107924343,107926094,107926671	107826430,107841385,107854704,107904065,107905626,107916129,107917739,107924504,107926301,107927193	Gene ID= ENSG00000080561.13 TPM= 3.5 Transcript Type= protein_coding
chrX	108084207	108091618	108084207	108091618	-	ENST00000217958.7@PSMD10	ENST00000217958.7	protein_coding	108091407,108088752,108087953,108087686,108084207	108091618,108088850,108088099,108087852,108085127	Gene ID= ENSG00000101843.18 TPM= 38.53 Transcript Type= protein_coding
chrX	108091784	108154671	108091784	108154671	+	ENST00000372246.7@ATG4A	ENST00000372246.7	protein_coding	108091784,108126077,108126793,108128781,108131260,108134057,108134339,108137091,108137804,108138113,108150152,108151802,108152979,108153642	108091836,108126187,108127094,108128852,108131358,108134158,108134411,108137170,108137991,108138191,108150297,108151858,108153087,108154671	Gene ID= ENSG00000101844.17 TPM= 3.5 Transcript Type= nonsense_mediated_decay
chrX	108439882	108697545	108439882	108697545	+	ENST00000361603.6@COL4A5	ENST00000361603.6	protein_coding	108439882,108539746,108559064,108563882,108568629,108568759,108571413,108571811,108573574,108575910,108577952,108578078,108578291,108580533,108580682,108580983,108582884,108584484,108586615,108591058,108591561,108595509,108596998,108597377,108598702,108601393,108601885,108602964,108606742,108614911,108620259,108621803,108622676,108624236,108625705,108626210,108655331,108665507,108666496,108667133,108668319,108677500,108680679,108680885,108681760,108686031,108687482,108692748,108694807,108695267,108696297	108440206,108539805,108559153,108563926,108568673,108568821,108571466,108571837,108573654,108575972,108577987,108578119,108578383,108580586,108580738,108581027,108582937,108584525,108586747,108591231,108591644,108595601,108597068,108597568,108598870,108601485,108601989,108603061,108606892,108615024,108620426,108621892,108622825,108624334,108625794,108626349,108655457,108665587,108666594,108667183,108668504,108677633,108680751,108680956,108681888,108686129,108687694,108692925,108694921,108695439,108697545	Gene ID= ENSG00000188153.12 TPM= 9.34 Transcript Type= protein_coding
chrX	109536876	109544690	109536876	109544690	+	ENST00000372106.5@NXT2	ENST00000372106.5	protein_coding	109536876,109538045,109541475,109542507	109537021,109538131,109541619,109544690	Gene ID= ENSG00000101888.11 TPM= 22.18 Transcript Type= protein_coding
chrX	109641337	109733403	109641337	109733403	-	ENST00000348502.10@ACSL4	ENST00000348502.10	protein_coding	109733139,109696144,109683136,109682719,109681266,109680998,109678265,109677988,109674402,109669034,109668101,109665420,109663211,109661531,109659354,109641337	109733403,109696196,109683372,109682896,109681375,109681136,109678415,109678111,109674473,109669173,109668273,109665494,109663402,109661645,109659511,109644186	Gene ID= ENSG00000068366.19 TPM= 44.53 Transcript Type= protein_coding
chrX	109641337	109760826	109641337	109760826	-	transcript2232.chrX.nnic@ACSL4	transcript2232.chrX.nnic	protein_coding	109760686,109696144,109683136,109682719,109681266,109680998,109678265,109677988,109674402,109669034,109668101,109665420,109663211,109661531,109659354,109641337	109760826,109696196,109683375,109682896,109681375,109681136,109678415,109678111,109674473,109669173,109668273,109665494,109663402,109661645,109659511,109644186	Gene ID= ENSG00000068366.19 TPM= 19.43 Transcript Type= NA
chrX	109641337	109733301	109641337	109733301	-	transcript2238.chrX.nnic@ACSL4	transcript2238.chrX.nnic	protein_coding	109733139,109683136,109682719,109681266,109680998,109678265,109677988,109674402,109669034,109668101,109665420,109663211,109661531,109659354,109641337	109733301,109683375,109682896,109681375,109681136,109678415,109678111,109674473,109669173,109668273,109665494,109663402,109661645,109659511,109644186	Gene ID= ENSG00000068366.19 TPM= 25.85 Transcript Type= NA
chrX	109641337	109733297	109641337	109733297	-	transcript2239.chrX.nic@ACSL4	transcript2239.chrX.nic	protein_coding	109733139,109683136,109682719,109681266,109680998,109678265,109677988,109674402,109669034,109668101,109665420,109663211,109661531,109659354,109641337	109733297,109683666,109682896,109681375,109681136,109678415,109678111,109674473,109669173,109668273,109665494,109663402,109661645,109659511,109644186	Gene ID= ENSG00000068366.19 TPM= 9.5 Transcript Type= NA
chrX	110002635	110177784	110002635	110177784	+	ENST00000372072.7@TMEM164	ENST00000372072.7	protein_coding	110002635,110067347,110109080,110144798,110171420,110173245	110002772,110067396,110109146,110144876,110171520,110177784	Gene ID= ENSG00000157600.11 TPM= 22.18 Transcript Type= protein_coding
chrX	110194186	110318239	110194186	110318239	-	ENST00000262844.9@AMMECR1	ENST00000262844.9	protein_coding	110317599,110264489,110216518,110202446,110200954,110194186	110318239,110264599,110216632,110202536,110201050,110198634	Gene ID= ENSG00000101935.9 TPM= 5.84 Transcript Type= protein_coding
chrX	110259586	110318151	110259586	110318151	-	transcript2256.chrX.nic@AMMECR1	transcript2256.chrX.nic	protein_coding	110317599,110259586	110318151,110264599	Gene ID= ENSG00000101935.9 TPM= 3.5 Transcript Type= NA
chrX	110196372	110318084	110196372	110318084	-	ENST00000372059.6@AMMECR1	ENST00000372059.6	protein_coding	110317599,110216518,110202446,110200954,110196372	110318084,110216632,110202536,110201050,110198634	Gene ID= ENSG00000101935.9 TPM= 2.34 Transcript Type= protein_coding
chrX	110673856	110795850	110673856	110795850	-	transcript2261.chrX.nnic@CHRDL1	transcript2261.chrX.nnic	protein_coding	110795744,110792088,110762695,110759661,110721385,110719835,110700654,110694163,110688609,110681482,110679336,110673856	110795850,110792215,110762807,110759754,110721530,110719928,110700721,110694331,110688803,110681649,110679425,110676361	Gene ID= ENSG00000101938.14 TPM= 4.09 Transcript Type= NA
chrX	110673856	110795765	110673856	110795765	-	ENST00000372045.5@CHRDL1	ENST00000372045.5	protein_coding	110795686,110792088,110762695,110759661,110721385,110719835,110700654,110694163,110688594,110681482,110679336,110673856	110795765,110792215,110762807,110759754,110721527,110719928,110700721,110694331,110688803,110681646,110679425,110676361	Gene ID= ENSG00000101938.14 TPM= 28.61 Transcript Type= protein_coding
chrX	111511662	111522399	111511662	111522399	+	ENST00000569275.1@LINC00890	ENST00000569275.1	protein_coding	111511662,111511998,111518075	111511834,111512094,111522399	Gene ID= ENSG00000260802.1 TPM= 2.34 Transcript Type= protein_coding
chrX	111681179	111688254	111681179	111688254	+	ENST00000468657.5@ALG13	ENST00000468657.5	protein_coding	111681179,111682132,111684965,111687887	111681424,111682294,111685103,111688254	Gene ID= ENSG00000101901.11 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chrX	111681234	111688097	111681234	111688097	+	ENST00000623255.1@ALG13	ENST00000623255.1	protein_coding	111681234,111682132,111684965,111687887	111681299,111682300,111685103,111688097	Gene ID= ENSG00000101901.11 TPM= 1.17 Transcript Type= protein_coding
chrX	111696984	111698528	111696984	111698528	-	transcript2274.chrX.nnic@NA	transcript2274.chrX.nnic	NA	111696984	111698528	Gene ID= novel_gene_chrX_2275 TPM= 4.67 Transcript Type= NA
chrX	115110616	115234072	115110616	115234072	-	ENST00000317135.12@LRCH2	ENST00000317135.12	protein_coding	115233693,115188226,115184411,115179646,115179427,115170299,115166255,115165841,115165558,115165405,115163676,115156602,115150022,115149827,115130155,115126843,115123945,115123080,115122760,115122527,115110616	115234072,115188370,115184537,115179751,115179563,115170432,115166342,115165952,115165655,115165463,115163783,115156667,115150070,115149943,115130199,115126893,115124002,115123192,115122897,115122604,115113335	Gene ID= ENSG00000130224.14 TPM= 2.34 Transcript Type= protein_coding
chrX	115561197	115650672	115561197	115650672	+	transcript2289.chrX.nnic@PLS3	transcript2289.chrX.nnic	protein_coding	115561197,115593497,115610243,115622246,115629198,115629835,115634000,115634881,115636836,115640408,115643313,115645021,115646072,115646402,115647550,115647893,115649429	115561260,115593632,115610323,115622409,115629327,115629967,115634081,115635046,115636978,115640503,115643508,115645099,115646186,115646535,115647673,115648017,115650672	Gene ID= ENSG00000102024.17 TPM= 37.36 Transcript Type= NA
chrX	115561182	115650861	115561182	115650861	+	ENST00000355899.7@PLS3	ENST00000355899.7	protein_coding	115561182,115610243,115622246,115629198,115629835,115634000,115634881,115636836,115640408,115643313,115645021,115646072,115646402,115647550,115647893,115649429	115561260,115610323,115622409,115629327,115629967,115634081,115635046,115636978,115640503,115643508,115645099,115646186,115646535,115647673,115648017,115650861	Gene ID= ENSG00000102024.17 TPM= 11.68 Transcript Type= protein_coding
chrX	115593608	115650672	115593608	115650672	+	ENST00000539310.5@PLS3	ENST00000539310.5	protein_coding	115593608,115610243,115622246,115629198,115629835,115634000,115634881,115636836,115640408,115643313,115645021,115646072,115646402,115647550,115647893,115649429	115593632,115610323,115622409,115629327,115629967,115634081,115635046,115636978,115640503,115643508,115645099,115646186,115646535,115647673,115648017,115650672	Gene ID= ENSG00000102024.17 TPM= 43.2 Transcript Type= protein_coding
chrX	116170722	116174972	116170722	116174972	+	ENST00000371906.4@AGTR2	ENST00000371906.4	protein_coding	116170722,116170968,116172246	116170816,116171027,116174972	Gene ID= ENSG00000180772.6 TPM= 28.02 Transcript Type= protein_coding
chrX	116436606	116461458	116436606	116461458	+	transcript2309.chrX.nic@SLC6A14	transcript2309.chrX.nic	protein_coding	116436606,116437790,116440966,116442687,116443643,116444918,116446741,116451442,116453017,116454324,116454977,116455357,116458809	116436757,116437955,116441097,116442848,116443790,116445050,116446881,116451670,116453142,116454442,116455076,116455466,116461458	Gene ID= ENSG00000268104.2 TPM= 5.84 Transcript Type= NA
chrX	116436622	116461458	116436622	116461458	+	ENST00000598581.2@SLC6A14	ENST00000598581.2	protein_coding	116436622,116437790,116440966,116442687,116443643,116444918,116446741,116451442,116453017,116454324,116454977,116455357,116457609,116458809	116436757,116437955,116441097,116442848,116443790,116445050,116446881,116451670,116453142,116454442,116455076,116455466,116457776,116461458	Gene ID= ENSG00000268104.2 TPM= 88.74 Transcript Type= protein_coding
chrX	118346337	118451120	118346337	118451120	+	transcript2319.chrX.nnic@WDR44	transcript2319.chrX.nnic	protein_coding	118346337,118378419,118387340,118392632,118394055,118395249,118396970,118398387,118404338,118406875,118409489,118410895,118432781,118436702,118441368,118442244,118442565,118443560,118444360,118448893,118451102	118346580,118378452,118387414,118393271,118394185,118395344,118397106,118398470,118404444,118407026,118409627,118410959,118432894,118436824,118441559,118442345,118442680,118443687,118444494,118449925,118451120	Gene ID= ENSG00000131725.13 TPM= 2.34 Transcript Type= NA
chrX	118346137	118449958	118346137	118449958	+	transcript2322.chrX.nic@WDR44	transcript2322.chrX.nic	protein_coding	118346137,118387340,118392632,118394055,118395249,118396970,118398387,118404338,118406875,118409489,118410895,118432781,118436702,118441368,118442244,118442565,118443560,118444360,118448893	118346580,118387414,118393271,118394185,118395344,118397106,118398470,118404444,118407026,118409627,118410959,118432894,118436824,118441559,118442345,118442680,118443687,118444494,118449958	Gene ID= ENSG00000131725.13 TPM= 2.34 Transcript Type= NA
chrX	118346109	118449961	118346109	118449961	+	ENST00000254029.7@WDR44	ENST00000254029.7	protein_coding	118346109,118378419,118387340,118392632,118394055,118395249,118396970,118398387,118404338,118406875,118409489,118410895,118432781,118436702,118441368,118442244,118442565,118443560,118444360,118448893	118346580,118378452,118387414,118393271,118394185,118395344,118397106,118398470,118404444,118407026,118409627,118410959,118432894,118436824,118441559,118442345,118442680,118443687,118444494,118449961	Gene ID= ENSG00000131725.13 TPM= 32.69 Transcript Type= protein_coding
chrX	118495843	118686139	118495843	118686139	+	transcript2324.chrX.nic@DOCK11	transcript2324.chrX.nic	protein_coding	118495843,118542725,118542926,118543511,118545323,118546021,118561383,118566005,118566574,118568079,118572323,118573806,118578525,118580097,118584735,118585041,118588137,118588413,118590210,118593214,118597431,118598030,118599139,118605238,118608072,118608231,118609278,118610272,118614692,118615600,118616202,118618550,118624539,118627504,118628163,118630379,118636346,118638080,118639435,118641190,118643457,118648945,118651964,118654602,118654904,118662686,118671023,118675936,118676591,118680482,118681058,118681694,118683079,118685688	118496073,118542841,118543015,118543593,118545392,118546116,118561517,118566182,118566653,118568162,118572463,118574018,118578647,118580179,118584857,118585117,118588321,118588478,118590302,118593337,118597552,118598116,118599228,118605356,118608141,118608356,118609349,118610418,118614775,118615711,118616240,118618728,118624655,118627579,118628272,118630490,118636412,118638127,118639577,118641305,118643594,118649127,118652077,118654817,118654961,118662792,118671145,118676049,118676737,118680692,118681248,118681794,118683217,118686139	Gene ID= ENSG00000147251.15 TPM= 12.26 Transcript Type= NA
chrX	118495909	118686147	118495909	118686147	+	ENST00000276202.8@DOCK11	ENST00000276202.8	protein_coding	118495909,118542725,118542926,118543511,118545323,118546021,118561383,118566005,118566574,118568079,118572323,118573806,118578525,118580097,118584735,118585041,118588137,118588413,118590210,118593214,118597431,118598030,118599139,118605238,118608072,118608231,118609278,118610272,118614692,118615600,118618550,118624539,118627504,118628163,118630379,118636346,118638080,118639435,118641190,118643457,118648945,118651964,118654602,118654904,118662686,118671023,118675936,118676591,118680482,118681058,118681694,118683079,118685688	118496073,118542841,118543015,118543593,118545392,118546116,118561517,118566182,118566653,118568162,118572463,118574018,118578647,118580179,118584857,118585117,118588321,118588478,118590302,118593337,118597552,118598116,118599228,118605356,118608141,118608356,118609349,118610418,118614775,118615711,118618728,118624655,118627579,118628272,118630490,118636412,118638127,118639577,118641305,118643594,118649127,118652077,118654817,118654961,118662792,118671145,118676049,118676737,118680692,118681248,118681794,118683217,118686147	Gene ID= ENSG00000147251.15 TPM= 8.17 Transcript Type= protein_coding
chrX	118727564	118805228	118727564	118805228	+	transcript2338.chrX.nnic@IL13RA1	transcript2338.chrX.nnic	protein_coding	118727564,118741017,118746954,118749658,118758055,118761138,118766530,118766844,118773879,118776427,118804932	118727726,118741156,118747092,118749778,118758242,118761289,118766577,118766976,118773975,118776511,118805228	Gene ID= ENSG00000131724.10 TPM= 7.39 Transcript Type= NA
chrX	118727604	118794539	118727604	118794539	+	transcript2343.chrX.nnic@IL13RA1	transcript2343.chrX.nnic	protein_coding	118727604,118741017,118749658,118758055,118761138,118766530,118766844,118773879,118776427,118791762	118727726,118741156,118749778,118758242,118761289,118766577,118766976,118773975,118776511,118794539	Gene ID= ENSG00000131724.10 TPM= 14.01 Transcript Type= NA
chrX	118727572	118794539	118727572	118794539	+	ENST00000371666.7@IL13RA1	ENST00000371666.7	protein_coding	118727572,118741017,118746954,118749658,118758055,118761138,118766530,118766844,118773879,118776427,118791762	118727726,118741156,118747092,118749778,118758242,118761289,118766577,118766976,118773975,118776511,118794539	Gene ID= ENSG00000131724.10 TPM= 127.65 Transcript Type= protein_coding
chrX	118974614	119018355	118974614	119018355	+	ENST00000304778.11@LONRF3	ENST00000304778.11	protein_coding	118974614,118978345,118989408,118990470,119006121,119009126,119011815,119013039,119014207,119017535	118975597,118978463,118989672,118990560,119006235,119009247,119011973,119013201,119014356,119018355	Gene ID= ENSG00000175556.16 TPM= 1.17 Transcript Type= protein_coding
chrX	118987446	119007050	118987446	119007050	+	transcript2356.chrX.nic@LONRF3	transcript2356.chrX.nic	protein_coding	118987446,118990470,119006121	118989672,118990560,119007050	Gene ID= ENSG00000175556.16 TPM= 10.51 Transcript Type= NA
chrX	118987446	118993124	118987446	118993124	+	transcript2358.chrX.nic@LONRF3	transcript2358.chrX.nic	protein_coding	118987446,118990470	118989672,118993124	Gene ID= ENSG00000175556.16 TPM= 8.17 Transcript Type= NA
chrX	118975362	119017987	118975362	119017987	+	ENST00000439603.5@LONRF3	ENST00000439603.5	protein_coding	118975362,118978345,118989408,118990470,119006121,119009126,119011815,119013039,119014207,119017535	118975597,118978463,118989672,118990560,119006235,119009247,119011973,119013201,119014356,119017987	Gene ID= ENSG00000175556.16 TPM= 1.17 Transcript Type= protein_coding
chrX	119021381	119022924	119021381	119022924	+	transcript2359.chrX.nnic@NA	transcript2359.chrX.nnic	NA	119021381	119022924	Gene ID= novel_gene_chrX_2360 TPM= 2.34 Transcript Type= NA
chrX	119236245	119244465	119236245	119244465	+	ENST00000535419.2@PGRMC1	ENST00000535419.2	protein_coding	119236245,119243151	119236691,119244465	Gene ID= ENSG00000101856.9 TPM= 4.67 Transcript Type= protein_coding
chrX	119236253	119244466	119236253	119244466	+	ENST00000217971.7@PGRMC1	ENST00000217971.7	protein_coding	119236253,119240309,119243151	119236691,119240464,119244466	Gene ID= ENSG00000101856.9 TPM= 140.11 Transcript Type= protein_coding
chrX	119399060	119454478	119399060	119454478	+	ENST00000217909.7@SLC25A43	ENST00000217909.7	protein_coding	119399060,119406460,119410190,119452009,119452865	119399678,119406701,119410362,119452143,119454478	Gene ID= ENSG00000077713.18 TPM= 31.53 Transcript Type= protein_coding
chrX	119466034	119469095	119466034	119469095	-	ENST00000395539.2@SLC25A5-AS1	ENST00000395539.2	processed_transcript	119466034	119469095	Gene ID= ENSG00000224281.4 TPM= 1.17 Transcript Type= retained_intron
chrX	119468400	119471319	119468400	119471319	+	ENST00000317881.8@SLC25A5	ENST00000317881.8	protein_coding	119468400,119469661,119470373,119470901	119468626,119470147,119470513,119471319	Gene ID= ENSG00000005022.5 TPM= 457.11 Transcript Type= protein_coding
chrX	119538882	119565412	119538882	119565412	-	transcript2379.chrX.nic@CXorf56	transcript2379.chrX.nic	protein_coding	119565232,119560268,119545463,119544353,119542505,119541328,119538882	119565412,119560385,119545504,119544491,119542594,119541420,119539789	Gene ID= ENSG00000018610.13 TPM= 2.34 Transcript Type= NA
chrX	119574536	119583347	119574536	119583347	+	ENST00000346330.6@UBE2A	ENST00000346330.6	protein_coding	119574536,119574901,119575375,119581507,119582597,119583127	119574755,119574981,119575400,119581596,119582676,119583347	Gene ID= ENSG00000077721.15 TPM= 3.5 Transcript Type= protein_coding
chrX	119574563	119584425	119574563	119584425	+	ENST00000630695.2@UBE2A	ENST00000630695.2	protein_coding	119574563,119574908,119575375,119581507,119582588,119583127	119574755,119574981,119575400,119581596,119582676,119584425	Gene ID= ENSG00000077721.15 TPM= 4.67 Transcript Type= protein_coding
chrX	119588337	119605895	119588337	119605895	-	ENST00000304449.5@NKRF	ENST00000304449.5	protein_coding	119605731,119592383,119588337	119605895,119592513,119591309	Gene ID= ENSG00000186416.13 TPM= 1.17 Transcript Type= protein_coding
chrX	119616948	119693370	119616948	119693370	-	ENST00000394610.5@SEPT6	ENST00000394610.5	protein_coding	119693076,119675554,119663482,119652854,119649937,119640692,119637027,119633360,119629318,119625335,119616948	119693370,119675668,119663677,119653040,119650098,119640788,119637195,119633492,119629508,119625379,119620051	Gene ID= ENSG00000125354.22 TPM= 2.34 Transcript Type= protein_coding
chrX	119615724	119693191	119615724	119693191	-	transcript2389.chrX.nnic@SEPT6	transcript2389.chrX.nnic	protein_coding	119693076,119675554,119663482,119652854,119649937,119640692,119637027,119633360,119629318,119615724	119693191,119675668,119663677,119653040,119650098,119640788,119637195,119633492,119629508,119616560	Gene ID= ENSG00000125354.22 TPM= 2.34 Transcript Type= NA
chrX	119617639	119693370	119617639	119693370	-	ENST00000343984.5@SEPT6	ENST00000343984.5	protein_coding	119693076,119675554,119663482,119652854,119649937,119640692,119637027,119633360,119629318,119617639	119693370,119675668,119663677,119653040,119650098,119640788,119637195,119633492,119629508,119618786	Gene ID= ENSG00000125354.22 TPM= 9.34 Transcript Type= protein_coding
chrX	119758613	119760164	119758613	119760164	+	ENST00000343905.4@SOWAHD	ENST00000343905.4	protein_coding	119758613	119760164	Gene ID= ENSG00000187808.4 TPM= 8.17 Transcript Type= protein_coding
chrX	119786506	119791643	119786506	119791643	-	ENST00000361575.3@RPL39	ENST00000361575.3	protein_coding	119791574,119789908,119786506	119791643,119790011,119786732	Gene ID= ENSG00000198918.7 TPM= 239.36 Transcript Type= protein_coding
chrX	119837892	119853135	119837892	119853135	-	transcript2406.chrX.nic@UPF3B	transcript2406.chrX.nic	protein_coding	119852773,119851767,119851495,119845198,119843191,119841735,119841076,119838367,119837892	119853135,119851873,119851601,119845296,119843301,119841778,119841258,119838527,119838051	Gene ID= ENSG00000125351.11 TPM= 3.5 Transcript Type= NA
chrX	119834022	119852998	119834022	119852998	-	ENST00000276201.6@UPF3B	ENST00000276201.6	protein_coding	119852773,119851767,119851495,119845198,119843191,119841735,119841076,119840646,119838367,119837757,119834022	119852998,119851873,119851601,119845296,119843301,119841778,119841258,119840684,119838527,119838051,119835027	Gene ID= ENSG00000125351.11 TPM= 1.17 Transcript Type= protein_coding
chrX	119834026	119852998	119834026	119852998	-	ENST00000345865.6@UPF3B	ENST00000345865.6	protein_coding	119852773,119851767,119851495,119845198,119843191,119841735,119841076,119838367,119837757,119834026	119852998,119851873,119851601,119845296,119843301,119841778,119841258,119838527,119838051,119835027	Gene ID= ENSG00000125351.11 TPM= 3.5 Transcript Type= protein_coding
chrX	119870475	119871827	119870475	119871827	-	ENST00000371442.3@RNF113A	ENST00000371442.3	protein_coding	119870475	119871827	Gene ID= ENSG00000125352.5 TPM= 1.17 Transcript Type= protein_coding
chrX	119871487	119876662	119871487	119876662	+	ENST00000371437.4@NDUFA1	ENST00000371437.4	protein_coding	119871487,119873304,119876514	119872013,119873393,119876662	Gene ID= ENSG00000125356.6 TPM= 129.6 Transcript Type= protein_coding
chrX	119872687	119873813	119872687	119873813	-	transcript2413.chrX.nnic@NA	transcript2413.chrX.nnic	NA	119872687	119873813	Gene ID= novel_gene_chrX_2414 TPM= 3.5 Transcript Type= NA
chrX	119934518	119943786	119934518	119943786	-	transcript2417.chrX.nic@NKAP	transcript2417.chrX.nic	protein_coding	119943220,119938730,119936612,119936297,119934518	119943786,119938810,119936682,119936431,119934557	Gene ID= ENSG00000101882.9 TPM= 3.5 Transcript Type= NA
chrX	120238333	120245252	120238333	120245252	-	transcript2421.chrX.nic@NKAPP1	transcript2421.chrX.nic	transcribed_processed_pseudogene	120244764,120238333	120245252,120240355	Gene ID= ENSG00000233382.6 TPM= 2.34 Transcript Type= NA
chrX	120236458	120245233	120236458	120245233	-	ENST00000452254.2@NKAPP1	ENST00000452254.2	transcribed_processed_pseudogene	120244764,120240227,120236458	120245233,120240355,120238242	Gene ID= ENSG00000233382.6 TPM= 1.17 Transcript Type= processed_transcript
chrX	120250752	120258398	120250752	120258398	+	ENST00000326624.2@ZBTB33	ENST00000326624.2	protein_coding	120250752,120253414	120250977,120258398	Gene ID= ENSG00000177485.6 TPM= 23.35 Transcript Type= protein_coding
chrX	120427827	120469365	120427827	120469365	-	ENST00000434600.6@LAMP2	ENST00000434600.6	protein_coding	120469106,120456651,120455357,120448970,120447841,120446305,120442599,120441730,120427827	120469365,120456769,120455570,120449128,120448025,120446427,120442662,120441894,120428626	Gene ID= ENSG00000005893.15 TPM= 1.17 Transcript Type= protein_coding
chrX	120430826	120469306	120430826	120469306	-	ENST00000200639.8@LAMP2	ENST00000200639.8	protein_coding	120469106,120456651,120455357,120448970,120447841,120446305,120442599,120441730,120430826	120469306,120456769,120455570,120449128,120448025,120446427,120442662,120441894,120431462	Gene ID= ENSG00000005893.15 TPM= 10.89 Transcript Type= protein_coding
chrX	120436494	120469306	120436494	120469306	-	ENST00000371335.4@LAMP2	ENST00000371335.4	protein_coding	120469106,120456651,120455357,120448970,120447841,120446305,120442599,120441730,120436494	120469306,120456769,120455570,120449128,120448025,120446427,120442662,120441894,120439293	Gene ID= ENSG00000005893.15 TPM= 286.06 Transcript Type= protein_coding
chrX	120524609	120559925	120524609	120559925	-	transcript2451.chrX.nic@CUL4B	transcript2451.chrX.nic	protein_coding	120559779,120557924,120547136,120546547,120545444,120544481,120544114,120543727,120542966,120541602,120540370,120539268,120538660,120538124,120536927,120535830,120534481,120532422,120530102,120524609	120559925,120558039,120547239,120546616,120545517,120544643,120544203,120543809,120543033,120541720,120540562,120539372,120538770,120538209,120537034,120535943,120534586,120532594,120530254,120526856	Gene ID= ENSG00000158290.16 TPM= 2.34 Transcript Type= NA
chrX	120526301	120561092	120526301	120561092	-	transcript2455.chrX.nic@CUL4B	transcript2455.chrX.nic	protein_coding	120560083,120557924,120547136,120546547,120545444,120544481,120544114,120543727,120542966,120541602,120540370,120539268,120538124,120536927,120535830,120534481,120532422,120530102,120526301	120561092,120558039,120547239,120546616,120545517,120544643,120544203,120543809,120543033,120541720,120540562,120539372,120538770,120537034,120535943,120534586,120532594,120530254,120526856	Gene ID= ENSG00000158290.16 TPM= 2.34 Transcript Type= NA
chrX	120524609	120560700	120524609	120560700	-	ENST00000371322.9@CUL4B	ENST00000371322.9	protein_coding	120560083,120557924,120547136,120546547,120545444,120544481,120544114,120543727,120542966,120541602,120540370,120539268,120538660,120538124,120536927,120535830,120534481,120532422,120530102,120524609	120560700,120558039,120547239,120546616,120545517,120544643,120544203,120543809,120543033,120541720,120540562,120539372,120538770,120538209,120537034,120535943,120534586,120532594,120530254,120526856	Gene ID= ENSG00000158290.16 TPM= 9.34 Transcript Type= protein_coding
chrX	120625931	120629995	120625931	120629995	-	ENST00000371313.2@C1GALT1C1	ENST00000371313.2	protein_coding	120629917,120627256,120625931	120629995,120627427,120627171	Gene ID= ENSG00000171155.7 TPM= 1.17 Transcript Type= protein_coding
chrX	120625793	120630150	120625793	120630150	-	ENST00000304661.5@C1GALT1C1	ENST00000304661.5	protein_coding	120629917,120625793	120630150,120627171	Gene ID= ENSG00000171155.7 TPM= 9.34 Transcript Type= protein_coding
chrX	123601880	123733090	123601880	123733090	-	transcript2469.chrX.nic@THOC2	transcript2469.chrX.nic	protein_coding	123732952,123712850,123706858,123703454,123697681,123696721,123696021,123686548,123671669,123668159,123667106,123665642,123645334,123644779,123644575,123640538,123638934,123638043,123636079,123633953,123632861,123631688,123627693,123626521,123625912,123624541,123624060,123623787,123623105,123622758,123621157,123620907,123619401,123614052,123613639,123613399,123611440,123610918,123601880	123733090,123712908,123706949,123703505,123697751,123696842,123696154,123686714,123671761,123668314,123667278,123665837,123645375,123644909,123644676,123640622,123639027,123638123,123636175,123634070,123633040,123631852,123627968,123626662,123626069,123624669,123624191,123623971,123623283,123622860,123621587,123620965,123619436,123614189,123613708,123613556,123611516,123610963,123603748	Gene ID= ENSG00000125676.19 TPM= 6.71 Transcript Type= NA
chrX	123621523	123733090	123621523	123733090	-	transcript2471.chrX.nic@THOC2	transcript2471.chrX.nic	protein_coding	123732952,123712850,123706858,123703454,123697681,123696721,123696021,123686548,123671669,123668159,123667106,123665642,123645334,123644779,123644575,123640538,123638934,123638043,123636079,123633953,123632861,123631688,123627693,123626521,123625912,123624541,123624060,123623787,123623644,123623105,123622758,123621523	123733090,123712908,123706949,123703505,123697751,123696842,123696154,123686714,123671761,123668314,123667278,123665837,123645375,123644909,123644676,123640622,123639027,123638123,123636175,123634070,123633040,123631852,123627968,123626662,123626069,123624669,123624191,123623971,123623709,123623283,123622860,123621587	Gene ID= ENSG00000125676.19 TPM= 8.17 Transcript Type= NA
chrX	123600562	123733054	123600562	123733054	-	ENST00000245838.12@THOC2	ENST00000245838.12	protein_coding	123732952,123712850,123706858,123703454,123697681,123696721,123696021,123686548,123671669,123668159,123667106,123665642,123645334,123644779,123644575,123640538,123638934,123638043,123636079,123633953,123632861,123631688,123627693,123626521,123625912,123624541,123624060,123623787,123623105,123622758,123621157,123620907,123619401,123614052,123613639,123613399,123611440,123610918,123600562	123733054,123712908,123706949,123703505,123697751,123696842,123696154,123686714,123671761,123668314,123667278,123665837,123645375,123644909,123644676,123640622,123639027,123638123,123636175,123634070,123633040,123631852,123627968,123626662,123626069,123624669,123624191,123623971,123623283,123622860,123621587,123620965,123619436,123614189,123613708,123613556,123611516,123610963,123601338	Gene ID= ENSG00000125676.19 TPM= 5.55 Transcript Type= protein_coding
chrX	123961706	124102496	123961706	124102496	+	transcript2516.chrX.nic@STAG2	transcript2516.chrX.nic	protein_coding	123961706,124022531,124025840,124030961,124037527,124042569,124045164,124047354,124049005,124050186,124051121,124051315,124056128,124057866,124061224,124061771,124062902,124063116,124063848,124065876,124066175,124066356,124068564,124071149,124076332,124077957,124081380,124083421,124086547,124090575,124090854,124094018,124095372,124100574	123961856,124022671,124025918,124031125,124037623,124042645,124045368,124047505,124049078,124050309,124051219,124051394,124056235,124057977,124061341,124061874,124062994,124063205,124064051,124065946,124066262,124066436,124068656,124071323,124076471,124078058,124081528,124083549,124086770,124090764,124090964,124094144,124095449,124102496	Gene ID= ENSG00000101972.18 TPM= 11.68 Transcript Type= NA
chrX	123960485	124102496	123960485	124102496	+	transcript2522.chrX.nic@STAG2	transcript2522.chrX.nic	protein_coding	123960485,124022531,124025840,124030961,124037527,124042569,124045164,124047354,124049005,124050186,124051121,124051315,124056128,124057866,124061224,124061771,124062902,124063116,124063848,124065876,124066175,124066356,124068564,124071149,124076332,124077957,124081380,124083421,124086547,124090575,124094018,124095372,124100574	123960866,124022671,124025918,124031125,124037623,124042645,124045368,124047505,124049078,124050309,124051219,124051394,124056235,124057977,124061341,124061874,124062994,124063205,124064051,124065946,124066262,124066436,124068656,124071323,124076471,124078058,124081528,124083549,124086770,124090764,124094144,124095449,124102496	Gene ID= ENSG00000101972.18 TPM= 12.84 Transcript Type= NA
chrX	123961739	124100902	123961739	124100902	+	ENST00000371144.7@STAG2	ENST00000371144.7	protein_coding	123961739,124021367,124022531,124025840,124030961,124037527,124042569,124045164,124047354,124049005,124050186,124051121,124051315,124056128,124057866,124061224,124061771,124062902,124063116,124063848,124065876,124066175,124066356,124068564,124071149,124076332,124077957,124081380,124083421,124086547,124090575,124094018,124095372,124100574	123961856,124021431,124022671,124025918,124031125,124037623,124042645,124045368,124047505,124049078,124050309,124051219,124051394,124056235,124057977,124061341,124061874,124062994,124063205,124064051,124065946,124066262,124066436,124068656,124071323,124076471,124078058,124081528,124083549,124086770,124090764,124094144,124095449,124100902	Gene ID= ENSG00000101972.18 TPM= 4.67 Transcript Type= protein_coding
chrX	123988414	123991596	123988414	123991596	-	transcript2529.chrX.nnic@NA	transcript2529.chrX.nnic	NA	123988414	123991596	Gene ID= novel_gene_chrX_2530 TPM= 2.34 Transcript Type= NA
chrX	124346344	124373155	124346344	124373155	+	ENST00000371139.8@SH2D1A	ENST00000371139.8	protein_coding	124346344,124365761,124370176,124371351	124346779,124365824,124370320,124373155	Gene ID= ENSG00000183918.15 TPM= 2.34 Transcript Type= protein_coding
chrX	129446510	129523490	129446510	129523490	-	transcript2536.chrX.nnic@SMARCA1	transcript2536.chrX.nnic	protein_coding	129523197,129518361,129516331,129515894,129515687,129511804,129507941,129506080,129504734,129499732,129497845,129496750,129493040,129491941,129490060,129488937,129487018,129481075,129480701,129471204,129468773,129465844,129465520,129448333,129446510	129523490,129518447,129516497,129515994,129515787,129511983,129508096,129506211,129504802,129499841,129498071,129496871,129493075,129492093,129490192,129489085,129487137,129481185,129480814,129471326,129468905,129465962,129465732,129448443,129447301	Gene ID= ENSG00000102038.15 TPM= 2.34 Transcript Type= NA
chrX	129446506	129523485	129446506	129523485	-	ENST00000371123.5@SMARCA1	ENST00000371123.5	protein_coding	129523197,129518361,129516331,129515894,129515687,129511804,129507941,129506080,129504734,129499732,129497845,129496750,129491941,129490060,129488937,129487018,129481075,129480701,129471204,129468773,129465844,129465520,129448333,129446506	129523485,129518447,129516497,129515994,129515787,129511983,129508096,129506211,129504802,129499841,129498071,129496871,129492093,129490192,129489085,129487137,129481185,129480814,129471326,129468905,129465962,129465732,129448443,129447233	Gene ID= ENSG00000102038.15 TPM= 4.67 Transcript Type= protein_coding
chrX	129446505	129523500	129446505	129523500	-	ENST00000371122.8@SMARCA1	ENST00000371122.8	protein_coding	129523197,129518361,129516331,129515894,129515687,129511804,129507941,129506080,129504734,129499732,129497845,129496750,129493040,129491941,129490060,129488937,129487018,129481075,129480701,129471204,129468773,129465844,129465520,129448302,129446505	129523500,129518447,129516497,129515994,129515787,129511983,129508096,129506211,129504802,129499841,129498071,129496871,129493075,129492093,129490192,129489085,129487137,129481185,129480814,129471326,129468905,129465962,129465732,129448443,129447301	Gene ID= ENSG00000102038.15 TPM= 2.34 Transcript Type= protein_coding
chrX	129520056	129522330	129520056	129522330	+	transcript2551.chrX.nnic@NA	transcript2551.chrX.nnic	NA	129520056	129522330	Gene ID= novel_gene_chrX_2552 TPM= 2.34 Transcript Type= NA
chrX	129540275	129592561	129540275	129592561	+	ENST00000371113.8@OCRL	ENST00000371113.8	protein_coding	129540275,129540744,129544958,129548563,129557325,129557861,129558633,129558840,129560550,129561179,129562384,129562599,129565772,129567254,129569264,129575140,129575897,129576317,129584344,129587002,129588179,129588886,129589845,129590146	129540478,129540823,129545037,129548601,129557435,129557950,129558753,129559001,129560651,129561293,129562500,129562786,129565883,129567363,129569399,129575250,129576062,129576552,129584367,129587118,129588263,129589013,129589956,129592561	Gene ID= ENSG00000122126.15 TPM= 5.84 Transcript Type= protein_coding
chrX	129540275	129592561	129540275	129592561	+	ENST00000357121.5@OCRL	ENST00000357121.5	protein_coding	129540275,129540744,129544958,129548563,129557325,129557861,129558633,129558840,129560550,129561179,129562384,129562599,129565772,129567254,129569264,129575140,129575897,129576317,129587002,129588179,129588886,129589845,129590146	129540478,129540823,129545037,129548601,129557435,129557950,129558753,129559001,129560651,129561293,129562500,129562786,129565883,129567363,129569399,129575250,129576062,129576552,129587118,129588263,129589013,129589956,129592561	Gene ID= ENSG00000122126.15 TPM= 15.18 Transcript Type= protein_coding
chrX	129645259	129654937	129645259	129654937	-	ENST00000429967.2@APLN	ENST00000429967.2	protein_coding	129654564,129648621,129645259	129654937,129648792,129647917	Gene ID= ENSG00000171388.11 TPM= 2.34 Transcript Type= protein_coding
chrX	129779984	129795201	129779984	129795201	+	ENST00000356892.3@SASH3	ENST00000356892.3	protein_coding	129779984,129787975,129788431,129790940,129792328,129792627,129792989,129793642	129780154,129788070,129788577,129791081,129792476,129792836,129793139,129795201	Gene ID= ENSG00000122122.9 TPM= 25.69 Transcript Type= protein_coding
chrX	129803346	129843914	129803346	129843914	-	transcript2572.chrX.nnic@ZDHHC9	transcript2572.chrX.nnic	protein_coding	129843696,129843259,129841919,129828981,129823679,129814658,129813677,129812718,129811406,129810905,129803346	129843914,129843326,129842080,129829141,129823837,129814795,129813725,129812820,129811509,129811001,129806486	Gene ID= ENSG00000188706.12 TPM= 2.34 Transcript Type= NA
chrX	129804936	129843914	129804936	129843914	-	transcript2578.chrX.nnic@ZDHHC9	transcript2578.chrX.nnic	protein_coding	129843696,129843259,129841779,129828981,129823679,129814658,129813661,129811406,129810905,129804936	129843914,129843326,129842080,129829141,129823837,129814795,129813725,129811509,129811001,129806486	Gene ID= ENSG00000188706.12 TPM= 9.34 Transcript Type= NA
chrX	129803288	129843884	129803288	129843884	-	ENST00000357166.10@ZDHHC9	ENST00000357166.10	protein_coding	129843696,129843259,129841779,129828981,129823679,129814658,129813677,129812718,129811406,129810905,129803288	129843884,129843326,129842080,129829141,129823837,129814795,129813725,129812820,129811509,129811001,129806486	Gene ID= ENSG00000188706.12 TPM= 10.51 Transcript Type= protein_coding
chrX	129906183	129929752	129906183	129929752	+	ENST00000394422.7@UTP14A	ENST00000394422.7	protein_coding	129906183,129907367,129908060,129908670,129911008,129911766,129919175,129919395,129920457,129920675,129921194,129924795,129925919,129926240,129929336	129906236,129907442,129908130,129908734,129911150,129911921,129919294,129919489,129920580,129920752,129921587,129925195,129926112,129926339,129929752	Gene ID= ENSG00000156697.12 TPM= 43.2 Transcript Type= protein_coding
chrX	130013973	130057626	130013973	130057626	+	ENST00000456822.5@BCORL1	ENST00000456822.5	protein_coding	130013973,130020985,130022897,130024990,130028635,130034455,130037367,130039137,130050717,130051860,130055854	130016213,130021150,130022977,130025379,130028861,130034676,130037533,130039282,130050794,130052016,130057626	Gene ID= ENSG00000085185.15 TPM= 7.01 Transcript Type= protein_coding
chrX	130064934	130110552	130064934	130110552	-	transcript2588.chrX.nnic@ELF4	transcript2588.chrX.nnic	protein_coding	130110325,130074581,130074049,130072226,130071336,130071040,130069485,130069300,130067481,130064934	130110552,130074752,130074141,130072417,130071419,130071232,130069677,130069482,130067525,130067479	Gene ID= ENSG00000102034.16 TPM= 8.17 Transcript Type= NA
chrX	130064928	130110495	130064928	130110495	-	ENST00000308167.9@ELF4	ENST00000308167.9	protein_coding	130110325,130081256,130074581,130074049,130072226,130071336,130071040,130069300,130064928	130110495,130081539,130074752,130074141,130072417,130071419,130071232,130069677,130067525	Gene ID= ENSG00000102034.16 TPM= 17.51 Transcript Type= protein_coding
chrX	130129370	130165887	130129370	130165887	-	ENST00000287295.7@AIFM1	ENST00000287295.7	protein_coding	130165551,130156461,130149469,130147752,130147493,130145479,130140533,130139795,130138593,130137078,130136643,130136045,130133313,130131675,130129970,130129370	130165887,130156603,130149568,130147876,130147623,130145569,130140617,130139871,130138701,130137185,130136731,130136185,130133455,130131799,130130166,130129628	Gene ID= ENSG00000156709.13 TPM= 59.55 Transcript Type= protein_coding
chrX	130339888	130373361	130339888	130373361	+	ENST00000543953.5@SLC25A14	ENST00000543953.5	protein_coding	130339888,130345182,130346544,130349251,130350646,130358640,130364628,130365541,130371564,130372909	130339976,130345275,130346691,130349345,130350731,130358735,130364752,130365676,130371644,130373361	Gene ID= ENSG00000102078.15 TPM= 2.34 Transcript Type= protein_coding
chrX	130339907	130373361	130339907	130373361	+	transcript2595.chrX.nic@SLC25A14	transcript2595.chrX.nic	protein_coding	130339907,130345182,130346544,130349251,130358640,130364628,130365541,130371564,130372909	130339976,130345275,130346691,130349345,130358735,130364752,130365676,130371644,130373361	Gene ID= ENSG00000102078.15 TPM= 2.34 Transcript Type= NA
chrX	130401969	130413343	130401969	130413343	+	ENST00000305536.10@RBMX2	ENST00000305536.10	protein_coding	130401969,130402255,130403802,130409257,130411348,130412361	130402037,130402370,130403853,130409386,130411525,130413343	Gene ID= ENSG00000134597.15 TPM= 1.75 Transcript Type= protein_coding
chrX	130401985	130413343	130401985	130413343	+	transcript2600.chrX.nic@RBMX2	transcript2600.chrX.nic	protein_coding	130401985,130403802,130409257,130411348,130412361	130402370,130403853,130409386,130411525,130413343	Gene ID= ENSG00000134597.15 TPM= 2.92 Transcript Type= NA
chrX	130623385	130903317	130623385	130903317	-	ENST00000338144.7@ENOX2	ENST00000338144.7	protein_coding	130903049,130901684,130783547,130709243,130703120,130688863,130679542,130669965,130667530,130665643,130656581,130637229,130634984,130631468,130627958,130623385	130903317,130901731,130783690,130709331,130703254,130689018,130679748,130670198,130667742,130665749,130656695,130637410,130635091,130631576,130628043,130625445	Gene ID= ENSG00000165675.16 TPM= 1.17 Transcript Type= protein_coding
chrX	130623385	130903317	130623385	130903317	-	ENST00000394363.5@ENOX2	ENST00000394363.5	protein_coding	130903049,130901684,130783547,130703120,130688863,130679542,130669965,130667530,130665643,130656581,130637229,130634984,130631468,130627958,130623385	130903317,130901731,130783690,130703254,130689018,130679748,130670198,130667742,130665749,130656695,130637410,130635091,130631576,130628043,130625445	Gene ID= ENSG00000165675.16 TPM= 18.68 Transcript Type= protein_coding
chrX	130898728	130903256	130898728	130903256	-	transcript2607.chrX.nic@ENOX2	transcript2607.chrX.nic	protein_coding	130903049,130898728	130903256,130901731	Gene ID= ENSG00000165675.16 TPM= 3.5 Transcript Type= NA
chrX	132023265	132075943	132023265	132075943	+	ENST00000394334.6@STK26	ENST00000394334.6	protein_coding	132023265,132023508,132054631,132063433,132068215,132068412,132069478,132071069,132072268,132072813,132072957,132074135	132023407,132023659,132054861,132063489,132068323,132068569,132069663,132071217,132072361,132072875,132073093,132075943	Gene ID= ENSG00000134602.15 TPM= 16.35 Transcript Type= protein_coding
chrX	132023302	132075943	132023302	132075943	+	ENST00000354719.10@STK26	ENST00000354719.10	protein_coding	132023302,132023508,132054631,132063433,132068215,132068412,132069478,132071069,132072268,132072966,132074135	132023407,132023659,132054861,132063489,132068323,132068569,132069663,132071217,132072361,132073093,132075943	Gene ID= ENSG00000134602.15 TPM= 1.17 Transcript Type= protein_coding
chrX	132203024	132219480	132203024	132219480	-	ENST00000620646.4@RAP2C	ENST00000620646.4	protein_coding	132219370,132218232,132217278,132216996,132214134,132203024	132219480,132218333,132217367,132217156,132214446,132205587	Gene ID= ENSG00000123728.9 TPM= 6.42 Transcript Type= protein_coding
chrX	132203025	132218124	132203025	132218124	-	ENST00000342983.6@RAP2C	ENST00000342983.6	protein_coding	132217916,132216996,132214134,132203025	132218124,132217806,132214446,132205587	Gene ID= ENSG00000123728.9 TPM= 15.76 Transcript Type= protein_coding
chrX	132372001	132489066	132372001	132489066	-	transcript2617.chrX.nic@MBNL3	transcript2617.chrX.nic	protein_coding	132488851,132406228,132392143,132390847,132386661,132384663,132382178,132372001	132489066,132406392,132392334,132391083,132386811,132384698,132382272,132379677	Gene ID= ENSG00000076770.14 TPM= 5.84 Transcript Type= NA
chrX	133535745	133985895	133535745	133985895	-	ENST00000370818.7@GPC3	ENST00000370818.7	protein_coding	133985275,133953050,133753482,133699895,133692369,133661730,133596440,133535745	133985895,133953211,133754176,133700028,133692494,133661850,133596599,133536293	Gene ID= ENSG00000147257.13 TPM= 204.33 Transcript Type= protein_coding
chrX	134373253	134428790	134373253	134428790	+	ENST00000370803.7@PHF6	ENST00000370803.7	protein_coding	134373253,134377572,134378005,134393501,134393909,134413491,134413823,134415016,134417169,134425201,134425661	134373467,134377755,134378106,134393634,134393952,134413657,134413966,134415120,134417302,134425330,134428790	Gene ID= ENSG00000156531.16 TPM= 22.77 Transcript Type= protein_coding
chrX	134373312	134428789	134373312	134428789	+	ENST00000332070.7@PHF6	ENST00000332070.7	protein_coding	134373312,134377572,134378005,134393501,134393909,134413491,134413823,134415016,134417169,134425201	134373467,134377755,134378106,134393634,134393952,134413657,134413966,134415120,134417302,134428789	Gene ID= ENSG00000156531.16 TPM= 5.25 Transcript Type= protein_coding
chrX	134460153	134500668	134460153	134500668	+	ENST00000298556.7@HPRT1	ENST00000298556.7	protein_coding	134460153,134473359,134475181,134486465,134490188,134493508,134498390,134498608,134500030	134460338,134473465,134475364,134486530,134490205,134493590,134498436,134498684,134500668	Gene ID= ENSG00000165704.14 TPM= 30.36 Transcript Type= protein_coding
chrX	134769567	134797216	134769567	134797216	-	transcript2647.chrX.nnic@FAM122B	transcript2647.chrX.nnic	protein_coding	134796108,134793803,134789223,134789085,134788730,134787472,134785886,134781821,134769567	134797216,134793893,134789266,134789139,134788831,134787533,134785950,134781917,134772283	Gene ID= ENSG00000156504.16 TPM= 4.29 Transcript Type= NA
chrX	134769566	134797134	134769566	134797134	-	ENST00000370790.5@FAM122B	ENST00000370790.5	protein_coding	134796108,134793815,134789223,134789085,134788730,134787472,134785886,134781821,134769566	134797134,134793893,134789266,134789139,134788831,134787533,134785947,134781917,134772283	Gene ID= ENSG00000156504.16 TPM= 7.79 Transcript Type= protein_coding
chrX	134769567	134797155	134769567	134797155	-	ENST00000343004.9@FAM122B	ENST00000343004.9	protein_coding	134796108,134793815,134789580,134789223,134789085,134788730,134787472,134785886,134781821,134769567	134797155,134793893,134789636,134789266,134789139,134788831,134787533,134785950,134781917,134772283	Gene ID= ENSG00000156504.16 TPM= 4.29 Transcript Type= protein_coding
chrX	134775738	134777544	134775738	134777544	+	transcript2651.chrX.nnic@NA	transcript2651.chrX.nnic	NA	134775738	134777544	Gene ID= novel_gene_chrX_2652 TPM= 15.18 Transcript Type= NA
chrX	134887626	134915267	134887626	134915267	-	ENST00000370783.7@MOSPD1	ENST00000370783.7	protein_coding	134915182,134899280,134899090,134896817,134891479,134887626	134915267,134899534,134899165,134897034,134891640,134889192	Gene ID= ENSG00000101928.12 TPM= 8.17 Transcript Type= protein_coding
chrX	134990938	134992473	134990938	134992473	+	ENST00000330288.5@SMIM10	ENST00000330288.5	protein_coding	134990938	134992473	Gene ID= ENSG00000184785.5 TPM= 7.01 Transcript Type= protein_coding
chrX	135020504	135022529	135020504	135022529	-	ENST00000391440.2@RTL8B	ENST00000391440.2	protein_coding	135020504	135022529	Gene ID= ENSG00000212747.4 TPM= 7.01 Transcript Type= protein_coding
chrX	135021728	135033539	135021728	135033539	+	transcript2676.chrX.nnic@RTL8C	transcript2676.chrX.nnic	protein_coding	135021728,135032950	135021864,135033539	Gene ID= ENSG00000134590.13 TPM= 3.5 Transcript Type= NA
chrX	135021728	135033540	135021728	135033540	+	transcript2677.chrX.nnic@RTL8C	transcript2677.chrX.nnic	protein_coding	135021728,135032912	135021892,135033540	Gene ID= ENSG00000134590.13 TPM= 4.67 Transcript Type= NA
chrX	135032366	135033546	135032366	135033546	+	ENST00000257013.8@RTL8C	ENST00000257013.8	protein_coding	135032366	135033546	Gene ID= ENSG00000134590.13 TPM= 112.09 Transcript Type= protein_coding
chrX	135050932	135052175	135050932	135052175	-	ENST00000370775.2@RTL8A	ENST00000370775.2	protein_coding	135050932	135052175	Gene ID= ENSG00000203950.6 TPM= 54.88 Transcript Type= protein_coding
chrX	135094987	135098634	135094987	135098634	-	ENST00000433425.3@SMIM10L2B	ENST00000433425.3	protein_coding	135098033,135094987	135098634,135097121	Gene ID= ENSG00000196972.8 TPM= 4.67 Transcript Type= protein_coding
chrX	135285792	135344121	135285792	135344121	-	transcript2688.chrX.nnic@ZNF75D	transcript2688.chrX.nnic	protein_coding	135343261,135341768,135295768,135293730,135292281,135291472,135291009,135285792	135344121,135341954,135296039,135294258,135292473,135291563,135291135,135287846	Gene ID= ENSG00000186376.14 TPM= 3.5 Transcript Type= NA
chrX	135285788	135344087	135285788	135344087	-	ENST00000370766.7@ZNF75D	ENST00000370766.7	protein_coding	135341768,135295768,135293730,135292281,135291472,135291009,135285788	135344087,135296039,135294258,135292473,135291563,135291135,135287846	Gene ID= ENSG00000186376.14 TPM= 1.17 Transcript Type= protein_coding
chrX	135285792	135344119	135285792	135344119	-	transcript2690.chrX.nnic@ZNF75D	transcript2690.chrX.nnic	protein_coding	135343261,135295768,135293730,135292281,135291472,135291009,135285792	135344119,135296039,135294258,135292473,135291563,135291135,135287846	Gene ID= ENSG00000186376.14 TPM= 3.5 Transcript Type= NA
chrX	135285792	135344047	135285792	135344047	-	transcript2691.chrX.nnic@ZNF75D	transcript2691.chrX.nnic	protein_coding	135341768,135295768,135292281,135291472,135291009,135285792	135344047,135296039,135292473,135291563,135291135,135287846	Gene ID= ENSG00000186376.14 TPM= 2.34 Transcript Type= NA
chrX	135344796	135363152	135344796	135363152	+	ENST00000339249.4@ZNF449	ENST00000339249.4	protein_coding	135344796,135347019,135349110,135359892,135360193	135344835,135347472,135349314,135360005,135363152	Gene ID= ENSG00000173275.12 TPM= 2.34 Transcript Type= protein_coding
chrX	135421943	135428074	135421943	135428074	+	ENST00000417443.2@SMIM10L2A	ENST00000417443.2	protein_coding	135421943,135423633	135422730,135428074	Gene ID= ENSG00000178947.8 TPM= 3.5 Transcript Type= protein_coding
chrX	135962070	135974063	135962070	135974063	-	ENST00000305963.2@MMGT1	ENST00000305963.2	protein_coding	135973597,135971058,135967390,135962070	135974063,135971110,135967493,135965183	Gene ID= ENSG00000169446.5 TPM= 43.2 Transcript Type= protein_coding
chrX	135985135	136047130	135985135	136047130	+	ENST00000370701.6@SLC9A6	ENST00000370701.6	protein_coding	135985135,135985603,135994786,135998108,135998482,135998856,136002108,136010442,136012949,136013349,136016645,136022586,136024330,136030132,136033414,136040076,136044452	135985477,135985827,135994985,135998185,135998558,135998968,136002213,136010583,136013054,136013437,136016758,136022697,136024483,136030162,136033493,136040181,136047130	Gene ID= ENSG00000198689.10 TPM= 8.17 Transcript Type= protein_coding
chrX	135985427	136047269	135985427	136047269	+	ENST00000370698.7@SLC9A6	ENST00000370698.7	protein_coding	135985427,135994786,135998108,135998482,135998856,136002108,136010442,136012949,136013349,136016645,136022586,136024330,136030132,136033414,136040076,136044452	135985827,135994889,135998185,135998558,135998968,136002213,136010583,136013054,136013437,136016758,136022697,136024483,136030162,136033493,136040181,136047269	Gene ID= ENSG00000198689.10 TPM= 2.34 Transcript Type= protein_coding
chrX	136147400	136211359	136147400	136211359	+	ENST00000394155.6@FHL1	ENST00000394155.6	protein_coding	136147400,136169907,136206407,136207016,136207792,136208455,136209243,136209871	136147628,136169980,136206588,136207190,136207961,136208641,136209442,136211359	Gene ID= ENSG00000022267.16 TPM= 9.34 Transcript Type= protein_coding
chrX	136147534	136211354	136147534	136211354	+	transcript2720.chrX.nic@FHL1	transcript2720.chrX.nic	protein_coding	136147534,136169907,136206407,136207016,136207792,136208455,136209871	136147878,136169980,136206588,136207190,136207961,136208641,136211354	Gene ID= ENSG00000022267.16 TPM= 31.55 Transcript Type= NA
chrX	136169637	136211359	136169637	136211359	+	ENST00000394153.6@FHL1	ENST00000394153.6	protein_coding	136169637,136169907,136206407,136207016,136207792,136208455,136209871	136169733,136169980,136206588,136207190,136207961,136208641,136211359	Gene ID= ENSG00000022267.16 TPM= 9.95 Transcript Type= protein_coding
chrX	136196773	136211359	136196773	136211359	+	ENST00000370683.5@FHL1	ENST00000370683.5	protein_coding	136196773,136206407,136207016,136207792,136208455,136209871	136197134,136206588,136207190,136207961,136208641,136211359	Gene ID= ENSG00000022267.16 TPM= 8 Transcript Type= protein_coding
chrX	136147465	136211359	136147465	136211359	+	ENST00000370690.7@FHL1	ENST00000370690.7	protein_coding	136147465,136169907,136206407,136207016,136207792,136208455,136209871	136147628,136169980,136206588,136207190,136207961,136208641,136211359	Gene ID= ENSG00000022267.16 TPM= 328.12 Transcript Type= protein_coding
chrX	136497079	136512342	136497079	136512342	+	ENST00000535601.5@HTATSF1	ENST00000535601.5	protein_coding	136497079,136497624,136499598,136500158,136500664,136502778,136504364,136509091,136510082,136510808	136497439,136497870,136499778,136500205,136500818,136502941,136504463,136509180,136510219,136512342	Gene ID= ENSG00000102241.11 TPM= 46.9 Transcript Type= protein_coding
chrX	136497207	136512346	136497207	136512346	+	transcript2733.chrX.nic@HTATSF1	transcript2733.chrX.nic	protein_coding	136497207,136497676,136499598,136500158,136500664,136502778,136504364,136509091,136510082,136510808	136497439,136497870,136499778,136500205,136500818,136502941,136504463,136509180,136510219,136512346	Gene ID= ENSG00000102241.11 TPM= 22.97 Transcript Type= NA
chrX	136497511	136512346	136497511	136512346	+	ENST00000218364.4@HTATSF1	ENST00000218364.4	protein_coding	136497511,136499598,136500158,136500664,136502778,136504364,136509091,136510082,136510808	136497870,136499778,136500205,136500818,136502941,136504463,136509180,136510219,136512346	Gene ID= ENSG00000102241.11 TPM= 72.59 Transcript Type= protein_coding
chrX	136532152	136556807	136532152	136556807	+	ENST00000370634.7@VGLL1	ENST00000370634.7	protein_coding	136532152,136535996,136548589,136550768,136556451	136532296,136536234,136549008,136550821,136556807	Gene ID= ENSG00000102243.12 TPM= 3.5 Transcript Type= protein_coding
chrX	136639543	136642426	136639543	136642426	+	ENST00000454385.5@LINC00892	ENST00000454385.5	processed_transcript	136639543,136640774,136642103	136639804,136640873,136642426	Gene ID= ENSG00000233093.5 TPM= 2.34 Transcript Type= antisense_RNA
chrX	136665547	136767524	136665547	136767524	-	transcript2738.chrX.nnic@ARHGEF6	transcript2738.chrX.nnic	protein_coding	136767144,136747508,136745223,136743585,136737592,136737384,136732102,136713276,136708675,136706908,136690610,136687932,136685677,136682758,136681890,136680731,136679535,136677936,136676624,136675007,136672020,136669482,136665547	136767524,136747592,136745347,136743786,136737660,136737464,136732172,136713370,136708770,136707030,136690748,136687991,136685823,136682844,136681968,136680876,136679660,136677956,136676717,136675096,136672119,136669536,136668169	Gene ID= ENSG00000129675.15 TPM= 6.22 Transcript Type= NA
chrX	136665547	136782088	136665547	136782088	-	ENST00000250617.6@ARHGEF6	ENST00000250617.6	protein_coding	136780718,136779414,136747508,136745223,136743585,136732102,136713276,136708675,136706908,136690610,136687932,136685677,136682758,136681890,136680731,136679535,136677936,136676624,136675007,136672020,136669482,136665547	136782088,136779497,136747592,136745347,136743786,136732172,136713370,136708770,136707030,136690748,136687991,136685823,136682844,136681968,136680876,136679660,136677956,136676717,136675096,136672119,136669536,136668169	Gene ID= ENSG00000129675.15 TPM= 12.65 Transcript Type= protein_coding
chrX	136665547	136767343	136665547	136767343	-	ENST00000370620.5@ARHGEF6	ENST00000370620.5	protein_coding	136767144,136747508,136745223,136743585,136732102,136713276,136708675,136706908,136690610,136687932,136685677,136682758,136681890,136680731,136679535,136677936,136676624,136675007,136672020,136669482,136665547	136767343,136747592,136745347,136743786,136732172,136713370,136708770,136707030,136690748,136687991,136685823,136682844,136681968,136680876,136679660,136677956,136676717,136675096,136672119,136669536,136668169	Gene ID= ENSG00000129675.15 TPM= 9.14 Transcript Type= protein_coding
chrX	136869192	136880779	136869192	136880779	-	transcript2751.chrX.nic@RBMX	transcript2751.chrX.nic	protein_coding	136880597,136879319,136879017,136877915,136876503,136875471,136875258,136875086,136873246,136872268,136869192	136880779,136879453,136879123,136878086,136876655,136875585,136875383,136875168,136874452,136872345,136870417	Gene ID= ENSG00000147274.14 TPM= 24.52 Transcript Type= NA
chrX	136869192	136880725	136869192	136880725	-	transcript2754.chrX.nic@RBMX	transcript2754.chrX.nic	protein_coding	136880597,136879319,136879017,136877915,136876503,136875471,136875258,136873246,136872268,136869192	136880725,136879453,136879123,136878086,136876655,136875585,136875383,136875168,136872345,136870417	Gene ID= ENSG00000147274.14 TPM= 12.26 Transcript Type= NA
chrX	136869192	136880779	136869192	136880779	-	transcript2755.chrX.nic@RBMX	transcript2755.chrX.nic	protein_coding	136880597,136879319,136879017,136877915,136876503,136875471,136875258,136875086,136872268,136869192	136880779,136879453,136879123,136878086,136876655,136875585,136875383,136875168,136872345,136870417	Gene ID= ENSG00000147274.14 TPM= 31.82 Transcript Type= NA
chrX	136869192	136880725	136869192	136880725	-	transcript2760.chrX.nic@RBMX	transcript2760.chrX.nic	protein_coding	136880597,136879319,136879017,136877915,136876503,136875471,136875258,136872268,136869192	136880725,136879453,136879123,136878086,136876655,136875585,136875383,136875168,136870417	Gene ID= ENSG00000147274.14 TPM= 11.09 Transcript Type= NA
chrX	136873461	136880725	136873461	136880725	-	ENST00000320676.11@RBMX	ENST00000320676.11	protein_coding	136880597,136879319,136879017,136877915,136876503,136875471,136875258,136875086,136873461	136880725,136879453,136879123,136878086,136876655,136875585,136875383,136875168,136874452	Gene ID= ENSG00000147274.14 TPM= 70.35 Transcript Type= protein_coding
chrX	136873958	136880725	136873958	136880725	-	ENST00000562646.5@RBMX	ENST00000562646.5	protein_coding	136880597,136879319,136879017,136877915,136876503,136875471,136875258,136873958	136880725,136879453,136879123,136878086,136876655,136875585,136875383,136875168	Gene ID= ENSG00000147274.14 TPM= 1.46 Transcript Type= protein_coding
chrX	136860281	136862537	136860281	136862537	+	transcript2767.chrX.nnic@NA	transcript2767.chrX.nnic	NA	136860281	136862537	Gene ID= novel_gene_chrX_2768 TPM= 2.34 Transcript Type= NA
chrX	137324972	137325049	137324972	137325049	-	ENST00000442158.1@AL355309.1	ENST00000442158.1	processed_pseudogene	137324972	137325049	Gene ID= ENSG00000214748.2 TPM= 2.34 Transcript Type= processed_pseudogene
chrX	139726349	139933053	139726349	139933053	-	transcript2776.chrX.nic@ATP11C	transcript2776.chrX.nic	protein_coding	139932016,139826704,139819338,139816863,139814878,139804471,139802236,139800060,139798679,139798273,139797176,139796273,139789327,139788192,139787173,139785226,139783164,139782547,139774690,139768260,139763316,139761961,139757808,139750025,139745722,139743559,139740991,139737916,139731651,139726349	139933053,139826823,139819427,139816943,139814985,139804599,139802339,139800110,139798743,139798354,139797326,139796470,139789488,139788343,139787244,139785299,139783267,139782728,139774953,139768434,139763418,139762106,139757867,139750152,139745857,139743624,139741094,139738069,139731755,139728962	Gene ID= ENSG00000101974.14 TPM= 5.84 Transcript Type= NA
chrX	139726346	139933070	139726346	139933070	-	ENST00000370557.5@ATP11C	ENST00000370557.5	protein_coding	139932016,139826704,139819338,139816863,139814878,139804471,139802236,139800060,139798679,139798273,139797176,139796273,139789327,139788192,139787173,139785226,139783164,139782547,139774690,139768260,139763316,139761961,139757808,139750025,139745722,139743559,139740991,139737916,139726346	139933070,139826823,139819427,139816943,139814985,139804599,139802339,139800110,139798743,139798354,139797326,139796470,139789488,139788343,139787244,139785299,139783267,139782728,139774953,139768434,139763418,139762097,139757867,139750152,139745857,139743624,139741094,139738069,139728962	Gene ID= ENSG00000101974.14 TPM= 1.17 Transcript Type= protein_coding
chrX	141175745	141177125	141175745	141177125	-	ENST00000370526.3@LDOC1	ENST00000370526.3	protein_coding	141175745	141177125	Gene ID= ENSG00000182195.7 TPM= 30.36 Transcript Type= protein_coding
chrX	143628128	143635204	143628128	143635204	-	ENST00000338017.8@SLITRK4	ENST00000338017.8	protein_coding	143634879,143628128	143635204,143631158	Gene ID= ENSG00000179542.15 TPM= 2.34 Transcript Type= protein_coding
chrX	147912050	147951066	147912050	147951066	+	transcript2785.chrX.nic@FMR1	transcript2785.chrX.nic	protein_coding	147912050,147921933,147924919,147925540,147928322,147928659,147929948,147930128,147932425,147932685,147936504,147937466,147940576,147943131,147944944,147945534,147948734	147912230,147921985,147925055,147925633,147928393,147928807,147930041,147930244,147932595,147932763,147936613,147937600,147940662,147943326,147945051,147945616,147951066	Gene ID= ENSG00000102081.13 TPM= 2.34 Transcript Type= NA
chrX	147911919	147951125	147911919	147951125	+	transcript2799.chrX.nic@FMR1	transcript2799.chrX.nic	protein_coding	147911919,147921933,147925540,147928322,147928659,147929948,147930128,147932425,147932685,147936504,147937466,147940576,147943131,147944869,147945534,147948734	147912230,147921985,147925633,147928393,147928807,147930041,147930244,147932595,147932763,147936613,147937600,147940662,147943326,147945051,147945616,147951125	Gene ID= ENSG00000102081.13 TPM= 4.45 Transcript Type= NA
chrX	147911919	147950634	147911919	147950634	+	transcript2800.chrX.nic@FMR1	transcript2800.chrX.nic	protein_coding	147911919,147921933,147925540,147928322,147928659,147929948,147930128,147932425,147932685,147936504,147937466,147940576,147943131,147944905,147945534,147948683	147912230,147921985,147925633,147928393,147928807,147930041,147930244,147932595,147932763,147936613,147937600,147940662,147943326,147945051,147945616,147950634	Gene ID= ENSG00000102081.13 TPM= 2.7 Transcript Type= NA
chrX	147911919	147951125	147911919	147951125	+	transcript2808.chrX.nic@FMR1	transcript2808.chrX.nic	protein_coding	147911919,147921933,147925540,147928322,147928659,147929948,147930128,147932425,147932685,147936504,147937466,147940576,147943131,147944944,147945534,147948734	147912230,147921985,147925633,147928393,147928807,147930041,147930244,147932595,147932763,147936613,147937600,147940662,147943326,147945051,147945616,147951125	Gene ID= ENSG00000102081.13 TPM= 6.78 Transcript Type= NA
chrX	147911951	147951112	147911951	147951112	+	ENST00000218200.12@FMR1	ENST00000218200.12	protein_coding	147911951,147921933,147925540,147928322,147928659,147929948,147930128,147932425,147932685,147936504,147937466,147940576,147943131,147944869,147945534,147948683	147912230,147921985,147925633,147928393,147928807,147930041,147930244,147932595,147932763,147936613,147937600,147940662,147943326,147945051,147945616,147951112	Gene ID= ENSG00000102081.13 TPM= 7.17 Transcript Type= protein_coding
chrX	147912052	147950636	147912052	147950636	+	ENST00000439526.6@FMR1	ENST00000439526.6	protein_coding	147912052,147921933,147925540,147928322,147928659,147929948,147930128,147932425,147932685,147936510,147937466,147940576,147943131,147944869,147945534,147948734	147912230,147921985,147925633,147928393,147928807,147930041,147930244,147932595,147932763,147936613,147937600,147940662,147943326,147945051,147945616,147950636	Gene ID= ENSG00000102081.13 TPM= 9.34 Transcript Type= protein_coding
chrX	149482543	149525803	149482543	149525803	-	transcript2819.chrX.nnic@IDS	transcript2819.chrX.nnic	protein_coding	149525742,149525019,149505035,149504157,149503312,149500949,149498107,149496346,149490314,149486925,149482543	149525803,149525074,149505246,149504293,149503489,149501037,149498307,149496516,149490440,149487098,149483218	Gene ID= ENSG00000010404.17 TPM= 6.42 Transcript Type= NA
chrX	149482543	149505342	149482543	149505342	-	transcript2825.chrX.nic@IDS	transcript2825.chrX.nic	protein_coding	149505035,149504157,149503312,149500949,149498107,149496346,149491538,149490314,149486925,149482543	149505342,149504293,149503489,149501037,149498307,149496516,149491667,149490440,149487098,149483218	Gene ID= ENSG00000010404.17 TPM= 5.06 Transcript Type= NA
chrX	149476990	149505347	149476990	149505347	-	ENST00000340855.10@IDS	ENST00000340855.10	protein_coding	149505035,149504157,149503312,149500949,149498107,149496346,149490314,149486925,149476990	149505347,149504293,149503489,149501037,149498307,149496516,149490440,149487098,149483218	Gene ID= ENSG00000010404.17 TPM= 21.99 Transcript Type= protein_coding
chrX	149487131	149505347	149487131	149505347	-	ENST00000370441.8@IDS	ENST00000370441.8	protein_coding	149505035,149504157,149503312,149500949,149498107,149496346,149490314,149487131	149505347,149504293,149503489,149501037,149498307,149496516,149490440,149487313	Gene ID= ENSG00000010404.17 TPM= 6.22 Transcript Type= protein_coding
chrX	149527736	149528638	149527736	149528638	-	transcript2848.chrX.nnic@NA	transcript2848.chrX.nnic	NA	149527736	149528638	Gene ID= novel_gene_chrX_2849 TPM= 2.34 Transcript Type= NA
chrX	149540630	149547309	149540630	149547309	+	ENST00000450602.6@CXorf40A	ENST00000450602.6	protein_coding	149540630,149542019,149545368,149545602,149546739	149540799,149542066,149545500,149545883,149547309	Gene ID= ENSG00000197620.10 TPM= 5.25 Transcript Type= protein_coding
chrX	149540975	149547309	149540975	149547309	+	ENST00000423421.5@CXorf40A	ENST00000423421.5	protein_coding	149540975,149542019,149545368,149545602,149546739	149541343,149542066,149545500,149545883,149547309	Gene ID= ENSG00000197620.10 TPM= 1.75 Transcript Type= protein_coding
chrX	149540987	149549940	149540987	149549940	+	ENST00000434353.6@CXorf40A	ENST00000434353.6	protein_coding	149540987,149542019,149545368,149545602,149546739,149549416	149541343,149542066,149545500,149545883,149546917,149549940	Gene ID= ENSG00000197620.10 TPM= 1.17 Transcript Type= protein_coding
chrX	149596556	149631912	149596556	149631912	-	ENST00000600449.7@TMEM185A	ENST00000600449.7	protein_coding	149631543,149611287,149608627,149603987,149600303,149599554,149596556	149631912,149611463,149608834,149604070,149600479,149599677,149598255	Gene ID= ENSG00000269556.7 TPM= 17.51 Transcript Type= protein_coding
chrX	149596557	149631912	149596557	149631912	-	ENST00000611119.4@TMEM185A	ENST00000611119.4	protein_coding	149631543,149608627,149603987,149600303,149599554,149596557	149631912,149608834,149604070,149600479,149599677,149598255	Gene ID= ENSG00000269556.7 TPM= 5.84 Transcript Type= protein_coding
chrX	149932197	149938490	149932197	149938490	-	transcript2865.chrX.nic@CXorf40B	transcript2865.chrX.nic	protein_coding	149938142,149937433,149934005,149933622,149932197	149938490,149937480,149934137,149933903,149932767	Gene ID= ENSG00000197021.8 TPM= 3.89 Transcript Type= NA
chrX	149932197	149935497	149932197	149935497	-	transcript2868.chrX.nic@CXorf40B	transcript2868.chrX.nic	protein_coding	149934005,149933622,149932197	149935497,149933903,149932767	Gene ID= ENSG00000197021.8 TPM= 2.34 Transcript Type= NA
chrX	149929527	149938435	149929527	149938435	-	ENST00000462691.5@CXorf40B	ENST00000462691.5	protein_coding	149938193,149937433,149934005,149933622,149932589,149929527	149938435,149937480,149934137,149933903,149932767,149930081	Gene ID= ENSG00000197021.8 TPM= 3.5 Transcript Type= protein_coding
chrX	149932201	149938459	149932201	149938459	-	ENST00000370404.5@CXorf40B	ENST00000370404.5	protein_coding	149938193,149937414,149934005,149933622,149932201	149938459,149937480,149934137,149933903,149932767	Gene ID= ENSG00000197021.8 TPM= 2.72 Transcript Type= protein_coding
chrX	149932197	149938811	149932197	149938811	-	ENST00000370406.7@CXorf40B	ENST00000370406.7	protein_coding	149938193,149937433,149934005,149933622,149932197	149938811,149937480,149934137,149933903,149932767	Gene ID= ENSG00000197021.8 TPM= 12.06 Transcript Type= protein_coding
chrX	150363284	150514178	150363284	150514178	+	ENST00000370401.6@MAMLD1	ENST00000370401.6	protein_coding	150363284,150445454,150462772,150469745,150473680,150503274,150509962,150512004	150363530,150445612,150462846,150471490,150473802,150503517,150510046,150514178	Gene ID= ENSG00000013619.13 TPM= 4.67 Transcript Type= protein_coding
chrX	150568584	150673143	150568584	150673143	+	transcript2876.chrX.nnic@MTM1	transcript2876.chrX.nnic	protein_coding	150568584,150592605,150596498,150598592,150619038,150638943,150641269,150645683,150649716,150657821,150659664,150660371,150663433,150671428	150568662,150592677,150596570,150598686,150619139,150639026,150641418,150645871,150649901,150658027,150659756,150660484,150663609,150673143	Gene ID= ENSG00000171100.14 TPM= 3.5 Transcript Type= NA
chrX	150766337	150898653	150766337	150898653	-	transcript2891.chrX.nnic@CD99L2	transcript2891.chrX.nnic	protein_coding	150898522,150831231,150828306,150816007,150814862,150795418,150795206,150793691,150777444,150776174,150770304,150766337	150898653,150831293,150828368,150816078,150814936,150795486,150795289,150793756,150777482,150776293,150770369,150769101	Gene ID= ENSG00000102181.20 TPM= 16.93 Transcript Type= NA
chrX	150766339	150898816	150766339	150898816	-	ENST00000613030.4@CD99L2	ENST00000613030.4	protein_coding	150898522,150831231,150816007,150814862,150795418,150795206,150793691,150777444,150776174,150771805,150770304,150766339	150898816,150831293,150816078,150814948,150795486,150795289,150793756,150777482,150776293,150771822,150770369,150769101	Gene ID= ENSG00000102181.20 TPM= 12.84 Transcript Type= protein_coding
chrX	150766336	150898650	150766336	150898650	-	transcript2899.chrX.nnic@CD99L2	transcript2899.chrX.nnic	protein_coding	150898522,150831231,150816007,150814889,150766336	150898650,150831293,150816078,150814936,150769058	Gene ID= ENSG00000102181.20 TPM= 11.68 Transcript Type= NA
chrX	150766337	150898706	150766337	150898706	-	ENST00000370377.7@CD99L2	ENST00000370377.7	protein_coding	150898522,150831231,150816007,150814862,150795418,150795206,150793691,150777444,150776174,150770304,150766337	150898706,150831293,150816078,150814936,150795486,150795289,150793756,150777482,150776293,150770369,150769101	Gene ID= ENSG00000102181.20 TPM= 86.99 Transcript Type= protein_coding
chrX	150983286	150990775	150983286	150990775	+	ENST00000325307.11@HMGB3	ENST00000325307.11	protein_coding	150983286,150985595,150986051,150987128,150987777	150983376,150985749,150986190,150987302,150990775	Gene ID= ENSG00000029993.14 TPM= 5.84 Transcript Type= protein_coding
chrX	151396703	151409364	151396703	151409364	+	transcript2905.chrX.nic@VMA21	transcript2905.chrX.nic	protein_coding	151396703,151403631,151404916	151397057,151403740,151409364	Gene ID= ENSG00000160131.13 TPM= 2.34 Transcript Type= NA
chrX	151397204	151409364	151397204	151409364	+	ENST00000330374.6@VMA21	ENST00000330374.6	protein_coding	151397204,151403631,151404916	151397361,151403740,151409364	Gene ID= ENSG00000160131.13 TPM= 35.03 Transcript Type= protein_coding
chrX	152830967	152869363	152830967	152869363	+	ENST00000440023.5@NSDHL	ENST00000440023.5	protein_coding	152830967,152831634,152846282,152850265,152858770,152862596,152865819,152867571,152868784	152831117,152831700,152846432,152850423,152858916,152862724,152865961,152867673,152869363	Gene ID= ENSG00000147383.10 TPM= 4.67 Transcript Type= protein_coding
chrX	152830967	152869729	152830967	152869729	+	ENST00000370274.7@NSDHL	ENST00000370274.7	protein_coding	152830967,152846282,152850265,152858770,152862596,152865819,152867571,152868784	152831117,152846432,152850423,152858916,152862724,152865961,152867673,152869729	Gene ID= ENSG00000147383.10 TPM= 11.68 Transcript Type= protein_coding
chrX	152898047	152973472	152898047	152973472	+	transcript2916.chrX.nnic@ZNF185	transcript2916.chrX.nnic	protein_coding	152898047,152914445,152914710,152915138,152917131,152917285,152918065,152918983,152920328,152920707,152922173,152922720,152928575,152931672,152932873,152938074,152945267,152959699,152963839,152965447,152967167,152969382,152970443,152971274	152898238,152914523,152914833,152915203,152917169,152917362,152918154,152919081,152920411,152920748,152922256,152922809,152928661,152931776,152932971,152938163,152945464,152959896,152963949,152965527,152967238,152969484,152970541,152973472	Gene ID= ENSG00000147394.18 TPM= 6.54 Transcript Type= NA
chrX	152898047	152973472	152898047	152973472	+	transcript2917.chrX.nnic@ZNF185	transcript2917.chrX.nnic	protein_coding	152898047,152914445,152914710,152915138,152917131,152917285,152918065,152918983,152920328,152920707,152922173,152922720,152931672,152932873,152938074,152945267,152959699,152963839,152965447,152967167,152969382,152970443,152971274	152898238,152914523,152914833,152915203,152917169,152917362,152918154,152919081,152920411,152920748,152922256,152922809,152931776,152932971,152938163,152945464,152959896,152963949,152965527,152967238,152969484,152970541,152973472	Gene ID= ENSG00000147394.18 TPM= 5.37 Transcript Type= NA
chrX	152898047	152973472	152898047	152973472	+	transcript2919.chrX.nnic@ZNF185	transcript2919.chrX.nnic	protein_coding	152898047,152914445,152914710,152915138,152917131,152917285,152918065,152918983,152920328,152920707,152922173,152931672,152932873,152938074,152945267,152959699,152963839,152965447,152967167,152969382,152970443,152971274	152898238,152914523,152914833,152915203,152917169,152917362,152918154,152919081,152920411,152920748,152922256,152931776,152932971,152938163,152945464,152959896,152963949,152965527,152967238,152969484,152970541,152973472	Gene ID= ENSG00000147394.18 TPM= 5.37 Transcript Type= NA
chrX	152917865	152973472	152917865	152973472	+	transcript2922.chrX.nic@ZNF185	transcript2922.chrX.nic	protein_coding	152917865,152918983,152920328,152920707,152922173,152928575,152931672,152932873,152938074,152945267,152959699,152963839,152965447,152967167,152969382,152970443,152971274	152918154,152919081,152920411,152920748,152922256,152928661,152931776,152932971,152938163,152945464,152959896,152963949,152965527,152967238,152969484,152970541,152973472	Gene ID= ENSG00000147394.18 TPM= 5.37 Transcript Type= NA
chrX	152941701	152973472	152941701	152973472	+	ENST00000454925.1@ZNF185	ENST00000454925.1	protein_coding	152941701,152945267,152959699,152963839,152965447,152967167,152969382,152970443,152971274	152941830,152945464,152959896,152963949,152965527,152967238,152969484,152970541,152973472	Gene ID= ENSG00000147394.18 TPM= 4.2 Transcript Type= protein_coding
chrX	153072482	153075018	153072482	153075018	+	ENST00000421798.4@PNMA6A	ENST00000421798.4	protein_coding	153072482,153072935	153072606,153075018	Gene ID= ENSG00000235961.5 TPM= 3.5 Transcript Type= protein_coding
chrX	153225658	153230375	153225658	153230375	+	transcript2934.chrX.nnic@AC236972.3	transcript2934.chrX.nnic	lincRNA	153225658,153225931,153229539	153225801,153226034,153230375	Gene ID= ENSG00000273877.4 TPM= 3.5 Transcript Type= NA
chrX	153225659	153230357	153225659	153230357	+	ENST00000620734.1@AC236972.3	ENST00000620734.1	lincRNA	153225659,153225885,153226981,153229539	153225801,153226034,153227090,153230357	Gene ID= ENSG00000273877.4 TPM= 2.34 Transcript Type= lincRNA
chrX	153447666	153470593	153447666	153470593	-	transcript2939.chrX.nic@HAUS7	transcript2939.chrX.nic	protein_coding	153470450,153469146,153464988,153462610,153457137,153456493,153456265,153455542,153454877,153454394,153447666	153470593,153469261,153465055,153462671,153457228,153456651,153456364,153455766,153455053,153454508,153447909	Gene ID= ENSG00000213397.10 TPM= 4.67 Transcript Type= NA
chrX	153447666	153459840	153447666	153459840	-	transcript2946.chrX.nic@HAUS7	transcript2946.chrX.nic	protein_coding	153457137,153456493,153455542,153454394,153447666	153459840,153456651,153456364,153454508,153447909	Gene ID= ENSG00000213397.10 TPM= 3.5 Transcript Type= NA
chrX	153447666	153470631	153447666	153470631	-	ENST00000370211.8@HAUS7	ENST00000370211.8	protein_coding	153470450,153469146,153464988,153462610,153457137,153456493,153456265,153455542,153454394,153447666	153470631,153469261,153465055,153462671,153457228,153456651,153456364,153455766,153454508,153447909	Gene ID= ENSG00000213397.10 TPM= 25.69 Transcript Type= protein_coding
chrX	153494939	153509554	153494939	153509554	+	ENST00000331595.8@BGN	ENST00000331595.8	protein_coding	153494939,153504621,153505238,153505863,153506529,153506830,153507047,153508248	153495113,153504869,153505350,153506076,153506639,153506923,153507185,153509554	Gene ID= ENSG00000182492.15 TPM= 352.61 Transcript Type= protein_coding
chrX	153587932	153599164	153587932	153599164	-	transcript2955.chrX.nnic@FAM58A	transcript2955.chrX.nnic	protein_coding	153598962,153598291,153596004,153594547,153592506,153587932	153599164,153598412,153596187,153594679,153592733,153588394	Gene ID= ENSG00000262919.7 TPM= 2.92 Transcript Type= NA
chrX	153587919	153599186	153587919	153599186	-	ENST00000576892.7@FAM58A	ENST00000576892.7	protein_coding	153598962,153596004,153594547,153592506,153587919	153599186,153596187,153594679,153592733,153588454	Gene ID= ENSG00000262919.7 TPM= 16.35 Transcript Type= protein_coding
chrX	153587927	153599188	153587927	153599188	-	transcript2959.chrX.nic@FAM58A	transcript2959.chrX.nic	protein_coding	153598962,153596004,153592506,153587927	153599188,153596187,153594679,153588454	Gene ID= ENSG00000262919.7 TPM= 2.34 Transcript Type= NA
chrX	153587932	153599117	153587932	153599117	-	ENST00000621629.4@FAM58A	ENST00000621629.4	protein_coding	153598966,153596004,153594547,153592506,153587932	153599117,153596187,153594679,153592733,153588454	Gene ID= ENSG00000262919.7 TPM= 1.17 Transcript Type= nonsense_mediated_decay
chrX	153587932	153599117	153587932	153599117	-	ENST00000620088.4@FAM58A	ENST00000620088.4	protein_coding	153598966,153596004,153594547,153592506,153587932	153599117,153596187,153594679,153592733,153588394	Gene ID= ENSG00000262919.7 TPM= 1.75 Transcript Type= nonsense_mediated_decay
chrX	153599340	153599893	153599340	153599893	+	ENST00000562749.1@AF274858.3	ENST00000562749.1	antisense_RNA	153599340	153599893	Gene ID= ENSG00000260081.1 TPM= 1.17 Transcript Type= antisense_RNA
chrX	153700497	153724401	153700497	153724401	-	transcript2974.chrX.nic@BCAP31	transcript2974.chrX.nic	protein_coding	153724201,153723153,153720872,153715542,153703959,153702935,153702007,153700497	153724401,153723288,153720972,153715689,153704094,153703058,153702107,153700975	Gene ID= ENSG00000185825.15 TPM= 42.33 Transcript Type= NA
chrX	153700497	153724697	153700497	153724697	-	ENST00000345046.10@BCAP31	ENST00000345046.10	protein_coding	153724334,153723153,153720872,153715542,153703959,153702935,153702007,153700497	153724697,153723288,153720972,153715689,153704094,153703058,153702107,153700975	Gene ID= ENSG00000185825.15 TPM= 566.57 Transcript Type= protein_coding
chrX	153700499	153724094	153700499	153724094	-	ENST00000458587.6@BCAP31	ENST00000458587.6	protein_coding	153723508,153723153,153720872,153715542,153703959,153702935,153702007,153700499	153724094,153723288,153720972,153715689,153704094,153703058,153702107,153700975	Gene ID= ENSG00000185825.15 TPM= 41.16 Transcript Type= protein_coding
chrX	153709258	153713194	153709258	153713194	+	transcript2984.chrX.nnic@NA	transcript2984.chrX.nnic	NA	153709258	153713194	Gene ID= novel_gene_chrX_2985 TPM= 3.5 Transcript Type= NA
chrX	153724868	153744762	153724868	153744762	+	ENST00000218104.5@ABCD1	ENST00000218104.5	protein_coding	153724868,153729232,153736112,153736345,153737157,153740092,153740574,153742987,153743221,153743489	153726166,153729412,153736254,153736513,153737251,153740237,153740719,153743071,153743346,153744762	Gene ID= ENSG00000101986.11 TPM= 30.36 Transcript Type= protein_coding
chrX	153785766	153794523	153785766	153794523	-	ENST00000217901.9@IDH3G	ENST00000217901.9	protein_coding	153794246,153790810,153790564,153790195,153789712,153788075,153787823,153787464,153787051,153786801,153786355,153786212,153785766	153794523,153790851,153790575,153790292,153789824,153788135,153787955,153787597,153787153,153786947,153786449,153786272,153785973	Gene ID= ENSG00000067829.18 TPM= 66.75 Transcript Type= protein_coding
chrX	153785766	153794377	153785766	153794377	-	transcript2993.chrX.nnic@IDH3G	transcript2993.chrX.nnic	protein_coding	153794246,153790564,153790195,153789712,153788075,153787823,153787464,153787051,153786801,153786355,153786212,153785766	153794377,153790575,153790292,153789824,153788135,153787955,153787597,153787153,153786947,153786449,153786272,153785973	Gene ID= ENSG00000067829.18 TPM= 7.2 Transcript Type= NA
chrX	153785766	153794512	153785766	153794512	-	ENST00000370092.7@IDH3G	ENST00000370092.7	protein_coding	153794246,153790810,153790564,153790195,153789712,153788075,153787823,153787464,153787051,153786801,153786355,153785766	153794512,153790851,153790575,153790292,153789824,153788135,153787955,153787597,153787153,153786947,153786449,153786272	Gene ID= ENSG00000067829.18 TPM= 4.29 Transcript Type= protein_coding
chrX	153793516	153798498	153793516	153798498	+	ENST00000320857.7@SSR4	ENST00000320857.7	protein_coding	153793516,153794674,153796434,153797458,153797725,153798071,153798329	153794585,153794754,153796552,153797532,153797814,153798136,153798498	Gene ID= ENSG00000180879.13 TPM= 13.43 Transcript Type= protein_coding
chrX	153794639	153798505	153794639	153798505	+	ENST00000370086.7@SSR4	ENST00000370086.7	protein_coding	153794639,153796434,153797458,153797725,153798071,153798329	153794754,153796552,153797532,153797814,153798136,153798505	Gene ID= ENSG00000180879.13 TPM= 144.78 Transcript Type= protein_coding
chrX	153794674	153798498	153794674	153798498	+	ENST00000370085.3@SSR4	ENST00000370085.3	protein_coding	153794674,153796434,153797725,153798071,153798329	153794754,153796552,153797814,153798136,153798498	Gene ID= ENSG00000180879.13 TPM= 11.09 Transcript Type= protein_coding
chrX	153904735	153907166	153904735	153907166	+	ENST00000358927.6@AVPR2	ENST00000358927.6	protein_coding	153904735,153904974,153905532,153906523	153904771,153905170,153906416,153907166	Gene ID= ENSG00000126895.13 TPM= 3.5 Transcript Type= protein_coding
chrX	153907377	153922051	153907377	153922051	-	transcript3012.chrX.nic@ARHGAP4	transcript3012.chrX.nic	protein_coding	153921605,153921365,153921097,153920626,153919155,153918832,153913778,153913409,153913218,153913024,153912700,153911129,153910922,153910700,153910506,153910171,153910012,153909741,153909443,153909070,153907377	153922051,153921527,153921159,153920808,153919283,153919053,153913879,153913600,153913302,153913051,153912802,153911189,153910999,153910834,153910611,153910404,153910085,153909924,153909535,153909169,153907962	Gene ID= ENSG00000089820.15 TPM= 9.48 Transcript Type= NA
chrX	153907377	153926312	153907377	153926312	-	transcript3014.chrX.nic@ARHGAP4	transcript3014.chrX.nic	protein_coding	153926136,153921605,153921365,153921097,153920626,153919155,153918832,153913778,153913409,153913218,153913024,153912700,153911129,153910922,153910700,153910171,153910012,153909741,153909443,153909070,153907377	153926312,153921809,153921527,153921159,153920808,153919283,153919053,153913879,153913600,153913302,153913051,153912802,153911189,153910999,153910834,153910611,153910085,153909924,153909535,153909169,153907962	Gene ID= ENSG00000089820.15 TPM= 24.97 Transcript Type= NA
chrX	153907377	153926309	153907377	153926309	-	transcript3019.chrX.nic@ARHGAP4	transcript3019.chrX.nic	protein_coding	153926136,153921605,153921365,153921097,153920626,153919155,153918832,153913778,153913024,153912700,153911129,153910922,153910700,153910506,153910171,153910012,153909741,153909443,153909070,153907377	153926309,153921809,153921527,153921159,153920808,153919283,153919053,153913879,153913600,153912802,153911189,153910999,153910834,153910611,153910404,153910085,153909924,153909535,153909169,153907962	Gene ID= ENSG00000089820.15 TPM= 7.65 Transcript Type= NA
chrX	153907377	153926244	153907377	153926244	-	ENST00000350060.9@ARHGAP4	ENST00000350060.9	protein_coding	153926136,153921605,153921365,153921097,153920626,153919155,153918832,153913778,153913409,153913218,153913024,153912700,153911129,153910922,153910700,153910506,153910171,153910012,153909741,153909443,153909070,153907377	153926244,153921809,153921527,153921159,153920808,153919283,153919053,153913879,153913600,153913302,153913051,153912802,153911189,153910999,153910834,153910611,153910404,153910085,153909924,153909535,153909169,153907962	Gene ID= ENSG00000089820.15 TPM= 74.78 Transcript Type= protein_coding
chrX	153907376	153926260	153907376	153926260	-	ENST00000370028.7@ARHGAP4	ENST00000370028.7	protein_coding	153926136,153921605,153921365,153921097,153920626,153919567,153919155,153918832,153913778,153913409,153913218,153913024,153912700,153911129,153910922,153910700,153910506,153910171,153910012,153909741,153909443,153909070,153907376	153926260,153921809,153921527,153921159,153920808,153919686,153919283,153919053,153913879,153913600,153913302,153913051,153912802,153911189,153910999,153910834,153910611,153910404,153910085,153909924,153909535,153909169,153907962	Gene ID= ENSG00000089820.15 TPM= 12.32 Transcript Type= protein_coding
chrX	153929924	153935015	153929924	153935015	-	ENST00000370009.5@NAA10	ENST00000370009.5	protein_coding	153934884,153934377,153933943,153932539,153932316,153930763,153929924	153935015,153934475,153934001,153932584,153932431,153930847,153930223	Gene ID= ENSG00000102030.15 TPM= 7.59 Transcript Type= protein_coding
chrX	153929926	153935015	153929926	153935015	-	ENST00000466877.5@NAA10	ENST00000466877.5	protein_coding	153934884,153934377,153933943,153932539,153932071,153930763,153929926	153935015,153934475,153934001,153932584,153932431,153930847,153930223	Gene ID= ENSG00000102030.15 TPM= 9.92 Transcript Type= retained_intron
chrX	153935263	153944691	153935263	153944691	-	ENST00000393700.7@RENBP	ENST00000393700.7	protein_coding	153944584,153944309,153944080,153943895,153943546,153942855,153941950,153941478,153940102,153935489,153935263	153944691,153944418,153944155,153943970,153943718,153943079,153942031,153941653,153940233,153935576,153935404	Gene ID= ENSG00000102032.12 TPM= 5.25 Transcript Type= protein_coding
chrX	153942231	153944687	153942231	153944687	-	transcript3047.chrX.nic@RENBP	transcript3047.chrX.nic	protein_coding	153944584,153944309,153944080,153943895,153943546,153942231	153944687,153944418,153944155,153943970,153943718,153943079	Gene ID= ENSG00000102032.12 TPM= 9.92 Transcript Type= NA
chrX	153947553	153971807	153947553	153971807	-	ENST00000310441.11@HCFC1	ENST00000310441.11	protein_coding	153970648,153964578,153964124,153963225,153962222,153961542,153960235,153959802,153959331,153958569,153958025,153957782,153957314,153956918,153956625,153956191,153954066,153953607,153952514,153951841,153951589,153951350,153950813,153950243,153949553,153947553	153971807,153964726,153964284,153963433,153962306,153961648,153960414,153960161,153959491,153958766,153958249,153957886,153957533,153957060,153956763,153956411,153955542,153953770,153952958,153952158,153951707,153951487,153950998,153950543,153949616,153949386	Gene ID= ENSG00000172534.13 TPM= 65.39 Transcript Type= protein_coding
chrX	153972327	153983195	153972327	153983195	+	ENST00000369982.4@TMEM187	ENST00000369982.4	protein_coding	153972327,153981850	153972860,153983195	Gene ID= ENSG00000177854.7 TPM= 43.2 Transcript Type= protein_coding
chrX	154010506	154019902	154010506	154019902	-	transcript3066.chrX.nic@IRAK1	transcript3066.chrX.nic	protein_coding	154019431,154019197,154018975,154018599,154018291,154018006,154016949,154016437,154016032,154014042,154013043,154012529,154010506	154019902,154019328,154019078,154018787,154018355,154018120,154017067,154016644,154016097,154014278,154013433,154012678,154011917	Gene ID= ENSG00000184216.13 TPM= 42.82 Transcript Type= NA
chrX	154010500	154019980	154010500	154019980	-	ENST00000369980.7@IRAK1	ENST00000369980.7	protein_coding	154019677,154019431,154019197,154018975,154018599,154018291,154018006,154016949,154016437,154016032,154014042,154013043,154012529,154010500	154019980,154019598,154019328,154019078,154018787,154018355,154018120,154017067,154016644,154016097,154014278,154013433,154012678,154011917	Gene ID= ENSG00000184216.13 TPM= 190.52 Transcript Type= protein_coding
chrX	154010506	154019876	154010506	154019876	-	ENST00000369974.6@IRAK1	ENST00000369974.6	protein_coding	154019677,154019431,154019197,154018975,154018599,154018291,154018006,154016949,154016437,154016032,154013043,154012529,154010506	154019876,154019598,154019328,154019078,154018787,154018355,154018120,154017067,154016644,154016097,154013433,154012678,154011917	Gene ID= ENSG00000184216.13 TPM= 25.89 Transcript Type= protein_coding
chrX	154030239	154097737	154030239	154097737	-	ENST00000628176.2@MECP2	ENST00000628176.2	protein_coding	154097604,154092184,154032207,154031396,154030239	154097737,154092307,154032557,154031450,154031286	Gene ID= ENSG00000169057.21 TPM= 1.17 Transcript Type= protein_coding
chrX	154021573	154097755	154021573	154097755	-	ENST00000303391.10@MECP2	ENST00000303391.10	protein_coding	154097604,154092184,154032207,154021573	154097755,154092307,154032557,154031450	Gene ID= ENSG00000169057.21 TPM= 26.85 Transcript Type= protein_coding
chrX	154030234	154097764	154030234	154097764	-	ENST00000453960.6@MECP2	ENST00000453960.6	protein_coding	154097604,154032207,154030234	154097764,154032557,154031450	Gene ID= ENSG00000169057.21 TPM= 15.18 Transcript Type= protein_coding
chrX	154090141	154097673	154090141	154097673	-	transcript3096.chrX.nic@MECP2	transcript3096.chrX.nic	protein_coding	154097604,154090141	154097673,154092307	Gene ID= ENSG00000169057.21 TPM= 3.5 Transcript Type= NA
chrX	154094966	154097523	154094966	154097523	-	ENST00000629277.1@MECP2	ENST00000629277.1	protein_coding	154094966	154097523	Gene ID= ENSG00000169057.21 TPM= 2.34 Transcript Type= retained_intron
chrX	154348529	154371222	154348529	154371222	-	ENST00000369856.7@FLNA	ENST00000369856.7	protein_coding	154370873,154367842,154367641,154367397,154366732,154366562,154366308,154366024,154365349,154365136,154364821,154364526,154364259,154364022,154362661,154362418,154362242,154361979,154361670,154361308,154359990,154359732,154359484,154359246,154358984,154358445,154358199,154357434,154357251,154354825,154354616,154354381,154354151,154353915,154353554,154353296,154353001,154352772,154352553,154352181,154351884,154351581,154350909,154350031,154349649,154349362,154348529	154371222,154368090,154367738,154367544,154366850,154366639,154366470,154366224,154365486,154365259,154364957,154364719,154364372,154364165,154362784,154362578,154362332,154362148,154361787,154361570,154360587,154359905,154359646,154359406,154359154,154358568,154358355,154357623,154357274,154355072,154354711,154354483,154354291,154354043,154353727,154353457,154353204,154352924,154352675,154352447,154352021,154351696,154351041,154350207,154349867,154349565,154349036	Gene ID= ENSG00000196924.14 TPM= 792.77 Transcript Type= protein_coding
chrX	154348532	154374638	154348532	154374638	-	ENST00000422373.5@FLNA	ENST00000422373.5	protein_coding	154374506,154370873,154367842,154367641,154367397,154366732,154366562,154366308,154366024,154365349,154365136,154364821,154364526,154364259,154364022,154362661,154362418,154362242,154361979,154361670,154361308,154359990,154359732,154359484,154359246,154358984,154358445,154358199,154357434,154354825,154354616,154354381,154354151,154353915,154353554,154353296,154353001,154352772,154352553,154352181,154351884,154351581,154350909,154350031,154349649,154349362,154348532	154374638,154371361,154368090,154367738,154367544,154366850,154366639,154366470,154366224,154365486,154365259,154364957,154364719,154364372,154364165,154362784,154362578,154362332,154362148,154361787,154361570,154360587,154359905,154359646,154359406,154359154,154358568,154358355,154357623,154355072,154354711,154354483,154354291,154354043,154353727,154353457,154353204,154352924,154352675,154352447,154352021,154351696,154351041,154350207,154349867,154349565,154349036	Gene ID= ENSG00000196924.14 TPM= 617.05 Transcript Type= protein_coding
chrX	154348532	154374638	154348532	154374638	-	ENST00000610817.4@FLNA	ENST00000610817.4	protein_coding	154374506,154370873,154367842,154367641,154367397,154366732,154366562,154366308,154366024,154365349,154365136,154364821,154364526,154364259,154364022,154362661,154362418,154362242,154361979,154361670,154361308,154359990,154359732,154359484,154359246,154358984,154358445,154358199,154357434,154357251,154354825,154354616,154354381,154354151,154353915,154353554,154353393,154351884,154351581,154350909,154350031,154349649,154349362,154348532	154374638,154371361,154368090,154367738,154367544,154366850,154366639,154366470,154366224,154365486,154365259,154364957,154364719,154364372,154364165,154362784,154362578,154362332,154362148,154361787,154361570,154360587,154359905,154359646,154359406,154359154,154358568,154358355,154357623,154357274,154355072,154354711,154354483,154354291,154354043,154353727,154353457,154351950,154351696,154351041,154350207,154349867,154349565,154349036	Gene ID= ENSG00000196924.14 TPM= 135.42 Transcript Type= protein_coding
chrX	154379197	154381523	154379197	154381523	+	ENST00000369842.8@EMD	ENST00000369842.8	protein_coding	154379197,154379690,154379942,154380234,154380753,154380882	154379566,154379794,154380019,154380367,154380802,154381523	Gene ID= ENSG00000102119.10 TPM= 39.31 Transcript Type= protein_coding
chrX	154379215	154381523	154379215	154381523	+	transcript3123.chrX.nic@EMD	transcript3123.chrX.nic	protein_coding	154379215,154379690,154379942,154380234,154380882	154379566,154379794,154380019,154380802,154381523	Gene ID= ENSG00000102119.10 TPM= 4.29 Transcript Type= NA
chrX	154379215	154381523	154379215	154381523	+	transcript3124.chrX.nic@EMD	transcript3124.chrX.nic	protein_coding	154379215,154379690,154379942,154380753,154380882	154379566,154379794,154380367,154380802,154381523	Gene ID= ENSG00000102119.10 TPM= 3.12 Transcript Type= NA
chrX	154398372	154402339	154398372	154402339	+	ENST00000344746.8@RPL10	ENST00000344746.8	protein_coding	154398372,154399338,154399487,154399803,154400464,154400702	154398542,154399396,154399594,154399941,154400626,154402339	Gene ID= ENSG00000147403.16 TPM= 31.53 Transcript Type= protein_coding
chrX	154398377	154400913	154398377	154400913	+	ENST00000491035.5@RPL10	ENST00000491035.5	protein_coding	154398377,154399338,154399487,154399803,154400702	154398542,154399396,154399594,154400626,154400913	Gene ID= ENSG00000147403.16 TPM= 23.35 Transcript Type= retained_intron
chrX	154398496	154400912	154398496	154400912	+	transcript3137.chrX.nnic@NA	transcript3137.chrX.nnic	NA	154398496	154400912	Gene ID= novel_gene_chrX_3138 TPM= 10.51 Transcript Type= NA
chrX	154401761	154412112	154401761	154412112	-	ENST00000309585.9@DNASE1L1	ENST00000309585.9	protein_coding	154411891,154409112,154405434,154404995,154404828,154403522,154403269,154402942,154401761	154412112,154409196,154405655,154405083,154404914,154403622,154403381,154403190,154402841	Gene ID= ENSG00000013563.13 TPM= 8.56 Transcript Type= protein_coding
chrX	154401758	154409278	154401758	154409278	-	ENST00000369808.7@DNASE1L1	ENST00000369808.7	protein_coding	154408558,154405434,154404995,154404828,154403522,154403269,154402942,154401758	154409278,154405655,154405083,154404914,154403622,154403381,154403190,154402841	Gene ID= ENSG00000013563.13 TPM= 6.22 Transcript Type= protein_coding
chrX	154401758	154404206	154401758	154404206	-	transcript3207.chrX.nic@DNASE1L1	transcript3207.chrX.nic	protein_coding	154403269,154401758	154404206,154403190	Gene ID= ENSG00000013563.13 TPM= 4.09 Transcript Type= NA
chrX	154401758	154409276	154401758	154409276	-	ENST00000369807.5@DNASE1L1	ENST00000369807.5	protein_coding	154409112,154405434,154404995,154404828,154403522,154403269,154402942,154401758	154409276,154405655,154405083,154404914,154403622,154403381,154403190,154402841	Gene ID= ENSG00000013563.13 TPM= 24.32 Transcript Type= protein_coding
chrX	154411523	154421726	154411523	154421726	+	transcript3161.chrX.nic@TAZ	transcript3161.chrX.nic	protein_coding	154411523,154412086,154413207,154413482,154414101,154419543,154420212,154420658,154420903	154411952,154412214,154413252,154413567,154414190,154420094,154420264,154420735,154421726	Gene ID= ENSG00000102125.15 TPM= 7.41 Transcript Type= NA
chrX	154411523	154421726	154411523	154421726	+	transcript3164.chrX.nic@TAZ	transcript3164.chrX.nic	protein_coding	154411523,154412086,154413207,154413482,154414101,154419543,154420212,154420658,154420903	154411952,154412214,154413339,154413567,154414190,154420094,154420264,154420735,154421726	Gene ID= ENSG00000102125.15 TPM= 5.08 Transcript Type= NA
chrX	154411523	154421726	154411523	154421726	+	transcript3180.chrX.nic@TAZ	transcript3180.chrX.nic	protein_coding	154411523,154412086,154413207,154413482,154419543,154420212,154420658,154420903	154411952,154412214,154413252,154413567,154420094,154420264,154420735,154421726	Gene ID= ENSG00000102125.15 TPM= 5.08 Transcript Type= NA
chrX	154411556	154421720	154411556	154421720	+	ENST00000612460.4@TAZ	ENST00000612460.4	protein_coding	154411556,154412086,154413207,154413482,154419543,154419705,154420032,154420212,154420658,154420903	154411952,154412214,154413252,154413567,154419623,154419746,154420094,154420264,154420735,154421720	Gene ID= ENSG00000102125.15 TPM= 31 Transcript Type= protein_coding
chrX	154411556	154421726	154411556	154421726	+	ENST00000601016.5@TAZ	ENST00000601016.5	protein_coding	154411556,154412086,154413207,154413482,154414101,154419543,154419705,154420032,154420212,154420658,154420903	154411952,154412214,154413252,154413567,154414190,154419623,154419746,154420094,154420264,154420735,154421726	Gene ID= ENSG00000102125.15 TPM= 10.33 Transcript Type= protein_coding
chrX	154411561	154421726	154411561	154421726	+	ENST00000615986.4@TAZ	ENST00000615986.4	protein_coding	154411561,154412086,154413207,154413482,154419543,154419705,154420032,154420212,154420658,154420903	154411952,154412214,154413358,154413567,154419623,154419746,154420094,154420264,154420735,154421726	Gene ID= ENSG00000102125.15 TPM= 3.33 Transcript Type= nonsense_mediated_decay
chrX	154424380	154428479	154424380	154428479	-	ENST00000360656.2@CH17-340M24.3	ENST00000360656.2	lincRNA	154428128,154424380	154428479,154424625	Gene ID= ENSG00000197180.2 TPM= 7.01 Transcript Type= lincRNA
chrX	154428632	154436516	154428632	154436516	+	ENST00000369762.6@ATP6AP1	ENST00000369762.6	protein_coding	154428632,154429048,154431830,154432266,154432931,154433635,154434208,154435139,154435274,154435682	154428853,154429174,154431904,154432459,154432971,154433720,154434446,154435186,154435505,154436516	Gene ID= ENSG00000071553.16 TPM= 645.29 Transcript Type= protein_coding
chrX	154428698	154436515	154428698	154436515	+	ENST00000455205.5@ATP6AP1	ENST00000455205.5	protein_coding	154428698,154429048,154431830,154432266,154432931,154433635,154434208,154435139,154435274,154435682	154428853,154431657,154431904,154432459,154432971,154433720,154434446,154435186,154435505,154436515	Gene ID= ENSG00000071553.16 TPM= 15.96 Transcript Type= nonsense_mediated_decay
chrX	154436878	154443467	154436878	154443467	+	transcript3225.chrX.nic@GDI1	transcript3225.chrX.nic	protein_coding	154436878,154438523,154438765,154439006,154439941,154441096,154441623,154442111,154442374,154442520	154437299,154438630,154438864,154439140,154440506,154441195,154441794,154442255,154442428,154443467	Gene ID= ENSG00000203879.11 TPM= 24.72 Transcript Type= NA
chrX	154436968	154443467	154436968	154443467	+	transcript3228.chrX.nic@GDI1	transcript3228.chrX.nic	protein_coding	154436968,154438523,154438765,154439006,154439941,154441623,154442111,154442374,154442520	154437299,154438630,154438864,154439140,154441195,154441794,154442255,154442428,154443467	Gene ID= ENSG00000203879.11 TPM= 11.87 Transcript Type= NA
chrX	154436878	154443467	154436878	154443467	+	transcript3230.chrX.nic@GDI1	transcript3230.chrX.nic	protein_coding	154436878,154438523,154438765,154439006,154439941,154442111,154442374,154442520	154437299,154438630,154438864,154439140,154441794,154442255,154442428,154443467	Gene ID= ENSG00000203879.11 TPM= 8.76 Transcript Type= NA
chrX	154436920	154443467	154436920	154443467	+	ENST00000447750.6@GDI1	ENST00000447750.6	protein_coding	154436920,154438523,154438765,154439006,154439941,154440375,154441096,154441623,154442111,154442374,154442520	154437299,154438630,154438864,154439140,154440139,154440506,154441195,154441794,154442255,154442428,154443467	Gene ID= ENSG00000203879.11 TPM= 146.15 Transcript Type= protein_coding
chrX	154444126	154450654	154444126	154450654	+	ENST00000393600.7@FAM50A	ENST00000393600.7	protein_coding	154444126,154445633,154445812,154446415,154448484,154448690,154448893,154449221,154449681,154449883,154450029,154450209,154450424	154444346,154445717,154445911,154446560,154448560,154448756,154448954,154449297,154449735,154449931,154450099,154450319,154450654	Gene ID= ENSG00000071859.14 TPM= 171.25 Transcript Type= protein_coding
chrX	154444155	154450654	154444155	154450654	+	ENST00000464419.5@FAM50A	ENST00000464419.5	protein_coding	154444155,154445633,154445812,154446415,154448484,154448690,154448893,154449221,154449681,154450029,154450209,154450424	154444346,154445717,154445911,154446560,154448560,154448756,154448954,154449297,154449931,154450099,154450319,154450654	Gene ID= ENSG00000071859.14 TPM= 38.15 Transcript Type= retained_intron
chrX	154458281	154477779	154458281	154477779	+	ENST00000369682.4@PLXNA3	ENST00000369682.4	protein_coding	154458281,154460157,154461099,154462128,154463391,154463590,154463951,154464157,154464402,154464754,154465018,154465424,154465657,154465935,154466150,154466376,154466623,154467057,154467232,154467545,154467767,154468082,154468303,154468663,154468823,154469056,154469379,154469688,154469977,154470442,154471105,154471488,154472590	154458428,154460777,154461638,154462310,154463519,154463690,154464074,154464313,154464501,154464868,154465218,154465520,154465847,154466080,154466270,154466512,154466793,154467150,154467471,154467688,154468001,154468224,154468559,154468729,154468969,154469215,154469482,154469784,154470167,154470611,154471317,154471638,154477779	Gene ID= ENSG00000130827.6 TPM= 3.5 Transcript Type= protein_coding
chrX	154476314	154477322	154476314	154477322	+	transcript3233.chrX.nnic@NA	transcript3233.chrX.nnic	NA	154476314	154477322	Gene ID= novel_gene_chrX_3234 TPM= 2.34 Transcript Type= NA
chrX	154477775	154479290	154477775	154479290	-	transcript3236.chrX.nnic@LAGE3	transcript3236.chrX.nnic	protein_coding	154478728,154478306,154477775	154479290,154478411,154478058	Gene ID= ENSG00000196976.7 TPM= 2.34 Transcript Type= NA
chrX	154477769	154479257	154477769	154479257	-	ENST00000357360.4@LAGE3	ENST00000357360.4	protein_coding	154478728,154478283,154477769	154479257,154478411,154478058	Gene ID= ENSG00000196976.7 TPM= 46.7 Transcript Type= protein_coding
chrX	154483717	154486650	154483717	154486650	-	transcript3242.chrX.nic@UBL4A	transcript3242.chrX.nic	protein_coding	154486537,154485771,154483717	154486650,154486333,154485649	Gene ID= ENSG00000102178.12 TPM= 8.47 Transcript Type= NA
chrX	154483717	154486670	154483717	154486670	-	ENST00000369660.8@UBL4A	ENST00000369660.8	protein_coding	154486537,154486228,154485771,154483717	154486670,154486333,154485979,154485649	Gene ID= ENSG00000102178.12 TPM= 126.39 Transcript Type= protein_coding
chrX	154487306	154490677	154487306	154490677	-	transcript3244.chrX.nic@SLC10A3	transcript3244.chrX.nic	protein_coding	154490307,154488584,154487306	154490677,154489082,154488496	Gene ID= ENSG00000126903.15 TPM= 5.84 Transcript Type= NA
chrX	154487306	154490690	154487306	154490690	-	ENST00000263512.5@SLC10A3	ENST00000263512.5	protein_coding	154490307,154487306	154490690,154489082	Gene ID= ENSG00000126903.15 TPM= 148.28 Transcript Type= protein_coding
chrX	154487343	154490663	154487343	154490663	-	ENST00000393587.4@SLC10A3	ENST00000393587.4	protein_coding	154490594,154490307,154487343	154490663,154490358,154489082	Gene ID= ENSG00000126903.15 TPM= 2.34 Transcript Type= protein_coding
chrX	154506171	154516266	154506171	154516266	-	transcript3275.chrX.nic@FAM3A	transcript3275.chrX.nic	protein_coding	154515760,154512823,154511848,154508474,154508289,154507811,154507406,154507203,154506171	154516266,154512936,154511871,154508597,154508347,154507882,154507490,154507329,154506906	Gene ID= ENSG00000071889.16 TPM= 11.92 Transcript Type= NA
chrX	154506171	154516249	154506171	154516249	-	transcript3282.chrX.nic@FAM3A	transcript3282.chrX.nic	protein_coding	154515760,154511848,154508474,154508289,154507406,154507203,154506171	154516249,154511871,154508597,154508347,154507490,154507329,154506906	Gene ID= ENSG00000071889.16 TPM= 4.92 Transcript Type= NA
chrX	154506159	154516236	154506159	154516236	-	ENST00000359889.9@FAM3A	ENST00000359889.9	protein_coding	154515910,154515760,154512823,154511848,154508474,154508289,154507811,154507406,154507203,154506159	154516236,154515812,154512936,154511871,154508597,154508347,154507861,154507490,154507329,154506906	Gene ID= ENSG00000071889.16 TPM= 28.85 Transcript Type= protein_coding
chrX	154506171	154516242	154506171	154516242	-	ENST00000621967.4@FAM3A	ENST00000621967.4	protein_coding	154515760,154512823,154512314,154511848,154508474,154508289,154507811,154507406,154507203,154506171	154516242,154512936,154512411,154511871,154508597,154508347,154507861,154507490,154507329,154506906	Gene ID= ENSG00000071889.16 TPM= 18.63 Transcript Type= nonsense_mediated_decay
chrX	154506171	154516239	154506171	154516239	-	ENST00000447601.6@FAM3A	ENST00000447601.6	protein_coding	154515760,154512823,154511848,154508474,154508289,154507811,154507406,154507203,154506171	154516239,154512936,154511871,154508597,154508347,154507861,154507490,154507329,154506906	Gene ID= ENSG00000071889.16 TPM= 61.84 Transcript Type= protein_coding
chrX	154506160	154516242	154506160	154516242	-	ENST00000322269.10@FAM3A	ENST00000322269.10	protein_coding	154515910,154515760,154512823,154512314,154511848,154508474,154508289,154507811,154507406,154507203,154506160	154516242,154515812,154512936,154512411,154511871,154508597,154508347,154507861,154507490,154507329,154506906	Gene ID= ENSG00000071889.16 TPM= 8.13 Transcript Type= protein_coding
chrX	154541222	154565046	154541222	154565046	+	transcript3291.chrX.nic@IKBKG	transcript3291.chrX.nic	protein_coding	154541222,154551988,154556165,154558532,154560407,154561688,154562810,154563559,154563959,154564319	154541391,154552189,154556376,154558650,154560559,154561784,154562953,154563701,154564020,154565046	Gene ID= ENSG00000269335.5 TPM= 5.55 Transcript Type= NA
chrX	154542244	154565046	154542244	154565046	+	ENST00000618670.4@IKBKG	ENST00000618670.4	protein_coding	154542244,154551988,154556165,154558532,154560407,154561688,154562810,154563559,154563959,154564319	154542452,154552189,154556376,154558650,154560559,154561784,154562953,154563701,154564020,154565046	Gene ID= ENSG00000269335.5 TPM= 3.21 Transcript Type= protein_coding
chrX	154547307	154565046	154547307	154565046	+	ENST00000594239.5@IKBKG	ENST00000594239.5	protein_coding	154547307,154551988,154556165,154558532,154560407,154561688,154562810,154563559,154563959,154564319	154547745,154552189,154556376,154558650,154560559,154561784,154562953,154563701,154564020,154565046	Gene ID= ENSG00000269335.5 TPM= 56.92 Transcript Type= protein_coding
chrX	154547641	154565033	154547641	154565033	+	ENST00000617207.4@IKBKG	ENST00000617207.4	protein_coding	154547641,154551988,154556165,154558535,154560407,154561688,154562810,154563559,154563959,154564319	154547745,154552189,154556376,154558650,154560559,154561784,154562953,154563701,154564020,154565033	Gene ID= ENSG00000269335.5 TPM= 2.04 Transcript Type= protein_coding
chrX	154675253	154751057	154675253	154751057	-	ENST00000369575.7@GAB3	ENST00000369575.7	protein_coding	154750954,154716026,154713207,154712229,154700004,154699294,154697132,154695917,154680132,154675253	154751057,154716329,154713423,154712701,154700059,154699513,154697213,154696019,154680248,154678294	Gene ID= ENSG00000160219.11 TPM= 10.51 Transcript Type= protein_coding
chrX	154762914	154776325	154762914	154776325	+	transcript3307.chrX.nic@DKC1	transcript3307.chrX.nic	protein_coding	154762914,154764899,154765444,154765907,154766216,154766997,154767256,154768302,154769167,154770759,154773131,154774602,154775195,154776187	154762981,154764966,154765530,154765998,154766400,154767061,154767382,154768432,154769310,154770879,154773249,154774705,154775273,154776325	Gene ID= ENSG00000130826.17 TPM= 2.34 Transcript Type= NA
chrX	154762756	154777689	154762756	154777689	+	ENST00000369550.9@DKC1	ENST00000369550.9	protein_coding	154762756,154764899,154765444,154765907,154766216,154766997,154767256,154768302,154769167,154770759,154773131,154774602,154775195,154776187,154776799	154762981,154764966,154765530,154765998,154766400,154767061,154767382,154768432,154769310,154770879,154773249,154774705,154775273,154776324,154777689	Gene ID= ENSG00000130826.17 TPM= 37.36 Transcript Type= protein_coding
chrX	154778684	154805521	154778684	154805521	-	ENST00000369534.7@MPP1	ENST00000369534.7	protein_coding	154805272,154792142,154791769,154790983,154789954,154786204,154785051,154784028,154783427,154781600,154781239,154778684	154805521,154792285,154791847,154791068,154790022,154786400,154785157,154784108,154783507,154781802,154781313,154779353	Gene ID= ENSG00000130830.14 TPM= 72.39 Transcript Type= protein_coding
chrX	154835795	155022753	154835795	155022753	-	ENST00000360256.8@F8	ENST00000360256.8	protein_coding	155022410,154999479,154996973,154992936,154987237,154984687,154969331,154966426,154965970,154961075,154956957,154953892,154947698,154928571,154906420,154904811,154904296,154903906,154902051,154901371,154899866,154896077,154863083,154861718,154860432,154835795	155022753,154999600,154997095,154993148,154987305,154984803,154969552,154966687,154966141,154961168,154957171,154954042,154947907,154931676,154906573,154905023,154904524,154904088,154902167,154901442,154899951,154896232,154863227,154861866,154860608,154837752	Gene ID= ENSG00000185010.13 TPM= 5.25 Transcript Type= protein_coding
chrX	154835788	154886317	154835788	154886317	-	ENST00000330287.10@F8	ENST00000330287.10	protein_coding	154886134,154863083,154861718,154860432,154835788	154886317,154863227,154861866,154860608,154837752	Gene ID= ENSG00000185010.13 TPM= 7.59 Transcript Type= protein_coding
chrX	154886349	154888061	154886349	154888061	+	ENST00000610495.1@F8A1	ENST00000610495.1	protein_coding	154886349	154888061	Gene ID= ENSG00000277203.1 TPM= 288.4 Transcript Type= protein_coding
chrX	155026685	155060303	155026685	155060303	+	ENST00000369498.7@FUNDC2	ENST00000369498.7	protein_coding	155026685,155033403,155046509,155051670,155054595	155027071,155033553,155046584,155051801,155060303	Gene ID= ENSG00000165775.17 TPM= 63.05 Transcript Type= protein_coding
chrX	155061622	155071362	155061622	155071362	-	ENST00000369484.7@CMC4	ENST00000369484.7	protein_coding	155070694,155063966,155061622	155071362,155064033,155061991	Gene ID= ENSG00000182712.15 TPM= 22.18 Transcript Type= protein_coding
chrX	155061622	155071214	155061622	155071214	-	transcript3329.chrX.nnic@MTCP1	transcript3329.chrX.nnic	protein_coding	155070964,155063966,155061622	155071214,155064033,155061991	Gene ID= ENSG00000214827.9 TPM= 2.34 Transcript Type= NA
chrX	155071431	155122727	155071431	155122727	+	ENST00000330045.11@BRCC3	ENST00000330045.11	protein_coding	155071431,155072327,155073377,155077170,155078616,155089263,155090784,155116057,155116711,155119999,155121223	155071650,155072343,155073431,155077289,155078703,155089351,155090839,155116188,155116754,155120168,155122727	Gene ID= ENSG00000185515.14 TPM= 1.17 Transcript Type= protein_coding
chrX	155071503	155123074	155071503	155123074	+	ENST00000369462.5@BRCC3	ENST00000369462.5	protein_coding	155071503,155072327,155073377,155077170,155078616,155089263,155090784,155099315,155116057,155116711,155119999,155121223	155071650,155072343,155073431,155077289,155078703,155089351,155090839,155099389,155116188,155116754,155120168,155123074	Gene ID= ENSG00000185515.14 TPM= 12.84 Transcript Type= protein_coding
chrX	155216366	155239817	155216366	155239817	+	ENST00000286428.5@VBP1	ENST00000286428.5	protein_coding	155216366,155220183,155227235,155228384,155236229,155238772	155216575,155220307,155227301,155228482,155236367,155239817	Gene ID= ENSG00000155959.10 TPM= 31.53 Transcript Type= protein_coding
chrX	155258241	155264589	155258241	155264589	-	ENST00000369454.3@RAB39B	ENST00000369454.3	protein_coding	155264074,155258241	155264589,155261229	Gene ID= ENSG00000155961.4 TPM= 1.17 Transcript Type= protein_coding
chrX	155276211	155334646	155276211	155334646	-	ENST00000369449.6@CLIC2	ENST00000369449.6	protein_coding	155334371,155299036,155298785,155279962,155279149,155276211	155334646,155299145,155298910,155280068,155279330,155278064	Gene ID= ENSG00000155962.12 TPM= 30.36 Transcript Type= protein_coding
chrX	155490115	155612936	155490115	155612936	-	ENST00000334398.7@TMLHE	ENST00000334398.7	protein_coding	155612792,155545096,155524456,155513986,155511673,155506898,155492357,155490115	155612936,155545277,155524632,155514265,155511792,155507134,155492495,155491666	Gene ID= ENSG00000185973.10 TPM= 3.5 Transcript Type= protein_coding
chrX	155881293	155943769	155881293	155943769	+	ENST00000286448.11@VAMP7	ENST00000286448.11	protein_coding	155881293,155889458,155895623,155898112,155900497,155919813,155939701,155941883	155881448,155889612,155895680,155898249,155900587,155919880,155939793,155943769	Gene ID= ENSG00000124333.15 TPM= 50.21 Transcript Type= protein_coding
chrX	155881375	155943769	155881375	155943769	+	ENST00000262640.11@VAMP7	ENST00000262640.11	protein_coding	155881375,155889458,155895623,155898112,155900497,155939701,155941883	155881448,155889612,155895680,155898249,155900587,155939793,155943769	Gene ID= ENSG00000124333.15 TPM= 4.67 Transcript Type= protein_coding
chrX	156021688	156025666	156021688	156025666	+	ENST00000340131.12@WASH6P	ENST00000340131.12	transcribed_unprocessed_pseudogene	156021688,156021999,156022323,156023012,156023302,156024120,156025032,156025241	156021792,156022145,156022834,156023209,156023460,156024272,156025100,156025666	Gene ID= ENSG00000182484.15 TPM= 5.84 Transcript Type= processed_transcript
chrX	156021688	156025710	156021688	156025710	+	ENST00000460206.6@WASH6P	ENST00000460206.6	transcribed_unprocessed_pseudogene	156021688,156021999,156022314,156023012,156023302,156024120,156025032,156025241	156021792,156022145,156022834,156023213,156023460,156024272,156025100,156025710	Gene ID= ENSG00000182484.15 TPM= 8.17 Transcript Type= processed_transcript
chrY	276322	303353	276322	303353	+	ENST00000399012.6_PAR_Y@PLCXD1	ENST00000399012.6_PAR_Y	protein_coding	276322,281482,284167,288733,290648,291499,293035,299097	276394,281684,284314,288869,290776,291654,293218,303353	Gene ID= ENSG00000182378.13_PAR_Y TPM= 7.01 Transcript Type= protein_coding
chrY	304750	318819	304750	318819	-	ENST00000326153.9_PAR_Y@GTPBP6	ENST00000326153.9_PAR_Y	protein_coding	318439,316914,315229,314890,314150,312766,311419,307732,307360,304750	318819,317051,315299,315020,314217,312924,311627,307880,307512,305197	Gene ID= ENSG00000178605.13_PAR_Y TPM= 105.08 Transcript Type= protein_coding
chrY	1268800	1309935	1268800	1309935	+	ENST00000417535.7_PAR_Y@CSF2RA	ENST00000417535.7_PAR_Y	protein_coding	1268800,1274755,1282678,1285778,1288519,1288759,1290337,1294328,1295427,1300491,1303261,1303923,1305446,1309402	1268879,1274842,1282779,1285920,1288642,1288888,1290509,1294461,1295456,1300626,1303362,1304019,1305527,1309935	Gene ID= ENSG00000198223.16_PAR_Y TPM= 2.14 Transcript Type= protein_coding
chrY	1268800	1309922	1268800	1309922	+	ENST00000381529.8_PAR_Y@CSF2RA	ENST00000381529.8_PAR_Y	protein_coding	1268800,1274755,1282678,1285778,1288519,1288759,1290337,1294328,1295427,1300491,1303923,1305446,1309402	1268879,1274818,1282779,1285920,1288642,1288888,1290509,1294461,1295456,1300626,1304019,1305527,1309922	Gene ID= ENSG00000198223.16_PAR_Y TPM= 2.72 Transcript Type= protein_coding
chrY	1268808	1310381	1268808	1310381	+	ENST00000381524.8_PAR_Y@CSF2RA	ENST00000381524.8_PAR_Y	protein_coding	1268808,1274755,1282678,1285778,1288519,1288759,1290337,1294328,1295427,1300491,1303923,1305446,1309402	1268879,1274842,1282779,1285920,1288642,1288888,1290509,1294461,1295456,1300626,1304019,1305527,1310381	Gene ID= ENSG00000198223.16_PAR_Y TPM= 3.3 Transcript Type= protein_coding
chrY	1336616	1382689	1336616	1382689	+	ENST00000381469.7_PAR_Y@IL3RA	ENST00000381469.7_PAR_Y	protein_coding	1336616,1341728,1352100,1352322,1356221,1358861,1365138,1378659,1381023,1382391	1336926,1341829,1352232,1352506,1356336,1358887,1365252,1378764,1381104,1382689	Gene ID= ENSG00000185291.11_PAR_Y TPM= 2.34 Transcript Type= protein_coding
chrY	1336616	1382685	1336616	1382685	+	ENST00000331035.9_PAR_Y@IL3RA	ENST00000331035.9_PAR_Y	protein_coding	1336616,1341728,1345316,1348431,1352100,1352322,1356221,1358861,1365138,1378659,1381023,1382391	1336926,1341829,1345434,1348545,1352232,1352506,1356336,1358887,1365252,1378764,1381104,1382685	Gene ID= ENSG00000185291.11_PAR_Y TPM= 65.39 Transcript Type= protein_coding
chrY	1386152	1392724	1386152	1392724	-	ENST00000381401.10_PAR_Y@SLC25A6	ENST00000381401.10_PAR_Y	protein_coding	1391899,1389241,1387279,1386152	1392724,1389727,1387419,1386759	Gene ID= ENSG00000169100.13_PAR_Y TPM= 747.26 Transcript Type= protein_coding
chrY	1403139	1453762	1403139	1453762	-	ENST00000534940.6_PAR_Y@ASMTL	ENST00000534940.6_PAR_Y	protein_coding	1453618,1442186,1439097,1435694,1435022,1432269,1427734,1425525,1421658,1418982,1417973,1412732,1403139	1453762,1442317,1439144,1435758,1435083,1432377,1428121,1425687,1421842,1419114,1418116,1412854,1403489	Gene ID= ENSG00000169093.15_PAR_Y TPM= 3.5 Transcript Type= protein_coding
chrY	1403141	1452873	1403141	1452873	-	ENST00000381317.8_PAR_Y@ASMTL	ENST00000381317.8_PAR_Y	protein_coding	1452748,1442186,1439097,1435694,1435022,1432269,1427734,1425525,1421658,1418982,1417973,1412732,1403141	1452873,1442317,1439144,1435758,1435083,1432377,1428121,1425687,1421842,1419114,1418116,1412854,1403489	Gene ID= ENSG00000169093.15_PAR_Y TPM= 15.18 Transcript Type= protein_coding
chrY	1462572	1537107	1462572	1537107	-	ENST00000381297.9_PAR_Y@P2RY8	ENST00000381297.9_PAR_Y	protein_coding	1536921,1462572	1537107,1466582	Gene ID= ENSG00000182162.10_PAR_Y TPM= 1.17 Transcript Type= protein_coding
chrY	1591593	1602514	1591593	1602514	+	ENST00000313871.8_PAR_Y@AKAP17A	ENST00000313871.8_PAR_Y	protein_coding	1591593,1593444,1595384,1599192,1600659	1591769,1594224,1595532,1599432,1602514	Gene ID= ENSG00000197976.11_PAR_Y TPM= 45.54 Transcript Type= protein_coding
chrY	1591623	1602502	1591623	1602502	+	ENST00000474361.6_PAR_Y@AKAP17A	ENST00000474361.6_PAR_Y	protein_coding	1591623,1593444,1595384,1599192,1600138,1600659	1591769,1594224,1595532,1599432,1600207,1602502	Gene ID= ENSG00000197976.11_PAR_Y TPM= 51.37 Transcript Type= nonsense_mediated_decay
chrY	2219516	2500978	2219516	2500978	-	ENST00000334651.10_PAR_Y@DHRSX	ENST00000334651.10_PAR_Y	protein_coding	2500817,2425197,2408745,2291502,2266740,2243023,2219516	2500978,2425304,2408813,2291603,2266947,2243230,2221229	Gene ID= ENSG00000169084.13_PAR_Y TPM= 24.52 Transcript Type= protein_coding
chrY	2691179	2741309	2691179	2741309	+	ENST00000381192.8_PAR_Y@CD99	ENST00000381192.8_PAR_Y	protein_coding	2691179,2714422,2717605,2719661,2720356,2722627,2723314,2726260,2738200,2740779	2691427,2714454,2717652,2719705,2720424,2722674,2723364,2726373,2738256,2741309	Gene ID= ENSG00000002586.18_PAR_Y TPM= 146.33 Transcript Type= protein_coding
chrY	2691310	2733672	2691310	2733672	+	ENST00000482405.7_PAR_Y@CD99	ENST00000482405.7_PAR_Y	protein_coding	2691310,2714422,2717605,2719661,2720356,2722627,2723314,2726260,2733357	2691427,2714454,2717652,2719705,2720424,2722674,2723364,2726373,2733672	Gene ID= ENSG00000002586.18_PAR_Y TPM= 1.55 Transcript Type= processed_transcript
chrY	2691280	2733667	2691280	2733667	+	ENST00000381184.6_PAR_Y@CD99	ENST00000381184.6_PAR_Y	protein_coding	2691280,2714422,2717605,2719661,2720356,2722627,2723314,2726260,2727293,2733357	2691427,2714454,2717652,2719705,2720424,2722674,2723364,2726373,2727343,2733667	Gene ID= ENSG00000002586.18_PAR_Y TPM= 1.55 Transcript Type= protein_coding
chrY	2841486	2867268	2841486	2867268	+	ENST00000250784.12@RPS4Y1	ENST00000250784.12	protein_coding	2841486,2842165,2844077,2845646,2854600,2865088,2866793	2841627,2842242,2844257,2845743,2854771,2865245,2867268	Gene ID= ENSG00000129824.15 TPM= 272.05 Transcript Type= protein_coding
chrY	2934406	2934771	2934406	2934771	-	ENST00000611750.1@AC006157.1	ENST00000611750.1	lincRNA	2934406	2934771	Gene ID= ENSG00000278847.1 TPM= 1.17 Transcript Type= lincRNA
chrY	2935383	2982506	2935383	2982506	+	transcript33.chrY.nnic@ZFY	transcript33.chrY.nnic	protein_coding	2935383,2953909,2961074,2975095,2975511,2976670,2977940,2978810	2935635,2953997,2961646,2975244,2975654,2976822,2978080,2982506	Gene ID= ENSG00000067646.11 TPM= 3.5 Transcript Type= NA
chrY	2934970	2982506	2934970	2982506	+	transcript35.chrY.nnic@ZFY	transcript35.chrY.nnic	protein_coding	2934970,2961074,2975095,2975511,2976670,2977940,2978810	2935446,2961646,2975244,2975654,2976822,2978080,2982506	Gene ID= ENSG00000067646.11 TPM= 3.5 Transcript Type= NA
chrY	6916338	6920482	6916338	6920482	+	transcript42.chrY.nnic@NA	transcript42.chrY.nnic	NA	6916338	6920482	Gene ID= novel_gene_chrY_43 TPM= 3.5 Transcript Type= NA
chrY	7273972	7381548	7273972	7381548	+	ENST00000528056.5@PRKY	ENST00000528056.5	transcribed_unprocessed_pseudogene	7273972,7303937,7325906,7341115,7356135,7367356,7371743,7375712	7274478,7304105,7326169,7341234,7356230,7367433,7371889,7381548	Gene ID= ENSG00000099725.14 TPM= 5.84 Transcript Type= processed_transcript
chrY	7326587	7328602	7326587	7328602	-	transcript51.chrY.nnic@NA	transcript51.chrY.nnic	NA	7326587	7328602	Gene ID= novel_gene_chrY_52 TPM= 3.5 Transcript Type= NA
chrY	7329531	7333544	7329531	7333544	-	transcript53.chrY.nnic@NA	transcript53.chrY.nnic	NA	7329531	7333544	Gene ID= novel_gene_chrY_54 TPM= 11.68 Transcript Type= NA
chrY	7697268	7770103	7697268	7770103	-	transcript57.chrY.nnic@TTTY16	transcript57.chrY.nnic	lincRNA	7769934,7712869,7711171,7704717,7701187,7697268	7770103,7713097,7711319,7704923,7701263,7699487	Gene ID= ENSG00000225520.1 TPM= 2.34 Transcript Type= NA
chrY	12662323	12716898	12662323	12716898	+	transcript70.chrY.nnic@TTTY15	transcript70.chrY.nnic	lincRNA	12662323,12664638,12686513,12690326,12702008,12709388,12714639	12662704,12664686,12686606,12690439,12702055,12709543,12716898	Gene ID= ENSG00000233864.7 TPM= 5.84 Transcript Type= NA
chrY	12662323	12707982	12662323	12707982	+	transcript74.chrY.nnic@TTTY15	transcript74.chrY.nnic	lincRNA	12662323,12664638,12686513,12699417,12702008,12707760	12662704,12664686,12686606,12699638,12702055,12707982	Gene ID= ENSG00000233864.7 TPM= 16.35 Transcript Type= NA
chrY	12662323	12716898	12662323	12716898	+	transcript75.chrY.nnic@TTTY15	transcript75.chrY.nnic	lincRNA	12662323,12664638,12686513,12702010,12709388,12714639	12662704,12664686,12686606,12702055,12709543,12716898	Gene ID= ENSG00000233864.7 TPM= 8.17 Transcript Type= NA
chrY	12662334	12692233	12662334	12692233	+	ENST00000440408.5@TTTY15	ENST00000440408.5	lincRNA	12662334,12664640,12686513,12687464	12662706,12664686,12686606,12692233	Gene ID= ENSG00000233864.7 TPM= 7.01 Transcript Type= lincRNA
chrY	12662323	12759797	12662323	12759797	+	transcript66.chrY.nnic@USP9Y	transcript66.chrY.nnic	protein_coding	12662323,12664638,12686513,12702010,12709388,12720589,12722108,12725113,12726575,12735610,12735998,12736409,12738157,12739523,12757192,12758506	12662704,12664686,12686606,12702055,12709543,12720737,12722187,12725225,12726793,12735727,12736249,12736549,12738309,12739629,12757398,12759797	Gene ID= ENSG00000114374.12 TPM= 8.17 Transcript Type= NA
chrY	12904792	12920478	12904792	12920478	+	transcript84.chrY.nnic@DDX3Y	transcript84.chrY.nnic	protein_coding	12904792,12907537,12909360,12911839,12912727,12912963,12913718,12914564,12914884,12915067,12915630,12915883,12916261,12916517,12916976,12917403,12918043	12904981,12907594,12909407,12911968,12912882,12913062,12913853,12914649,12914982,12915227,12915774,12916027,12916442,12916634,12917060,12917542,12920478	Gene ID= ENSG00000067048.16 TPM= 2.34 Transcript Type= NA
chrY	12904814	12920478	12904814	12920478	+	transcript85.chrY.nnic@DDX3Y	transcript85.chrY.nnic	protein_coding	12904814,12907537,12909360,12911839,12912727,12912963,12913718,12914564,12914884,12915067,12915630,12915883,12916261,12916517,12916907,12917403,12918043	12904991,12907594,12909407,12911968,12912882,12913062,12913853,12914649,12914982,12915227,12915774,12916027,12916442,12916634,12917060,12917542,12920478	Gene ID= ENSG00000067048.16 TPM= 2.34 Transcript Type= NA
chrY	12905721	12920478	12905721	12920478	+	transcript86.chrY.nic@DDX3Y	transcript86.chrY.nic	protein_coding	12905721,12907537,12909360,12911839,12912727,12912963,12913718,12914564,12914884,12915067,12915630,12915883,12916261,12916517,12916907,12917403,12918043	12905815,12907594,12909407,12911968,12912882,12913062,12913853,12914649,12914982,12915227,12915774,12916027,12916442,12916634,12917060,12917542,12920478	Gene ID= ENSG00000067048.16 TPM= 3.5 Transcript Type= NA
chrY	12904792	12920478	12904792	12920478	+	transcript89.chrY.nic@DDX3Y	transcript89.chrY.nic	protein_coding	12904792,12907537,12909360,12911839,12912727,12912963,12913718,12914564,12915630,12915883,12916261,12916517,12916907,12917403,12918043	12904981,12907594,12909407,12911968,12912882,12913062,12913853,12915227,12915774,12916027,12916442,12916634,12917060,12917542,12920478	Gene ID= ENSG00000067048.16 TPM= 2.34 Transcript Type= NA
chrY	12904831	12920478	12904831	12920478	+	ENST00000336079.7@DDX3Y	ENST00000336079.7	protein_coding	12904831,12907537,12909360,12911839,12912727,12912963,12913718,12914564,12914884,12915067,12915630,12915883,12916261,12916517,12916907,12917403,12918043	12904981,12907594,12909407,12911968,12912882,12913062,12913853,12914649,12914982,12915227,12915774,12916027,12916442,12916634,12917060,12917542,12920478	Gene ID= ENSG00000067048.16 TPM= 50.21 Transcript Type= protein_coding
chrY	12909776	12911127	12909776	12911127	-	transcript92.chrY.nnic@NA	transcript92.chrY.nnic	NA	12909776	12911127	Gene ID= novel_gene_chrY_93 TPM= 2.34 Transcript Type= NA
chrY	13248379	13480670	13248379	13480670	-	ENST00000545955.5@UTY	ENST00000545955.5	protein_coding	13479514,13479254,13470121,13449017,13414735,13410993,13396918,13393859,13369256,13366267,13360430,13359767,13359088,13358464,13357877,13355923,13355003,13335563,13326221,13324601,13323555,13306186,13306038,13305399,13302877,13298957,13297707,13260278,13251017,13248379	13480670,13479317,13470229,13449066,13414793,13411113,13396972,13393893,13369349,13366393,13360528,13359986,13359222,13358619,13357969,13356018,13355398,13336335,13326350,13324706,13323760,13306250,13306112,13305547,13302991,13299144,13297848,13260404,13251187,13249882	Gene ID= ENSG00000183878.15 TPM= 1.17 Transcript Type= protein_coding
chrY	13234585	13480016	13234585	13480016	-	transcript98.chrY.nnic@UTY	transcript98.chrY.nnic	protein_coding	13479514,13479254,13470121,13449017,13414735,13410993,13396918,13393859,13369256,13366267,13360430,13359767,13359088,13357877,13355923,13355003,13335563,13326221,13324601,13323555,13306186,13306038,13305399,13302877,13298957,13297707,13260278,13251017,13234585	13480016,13479317,13470229,13449066,13414793,13411113,13396972,13393893,13369349,13366393,13360528,13359986,13359222,13357969,13356018,13355398,13336335,13326350,13324706,13323760,13306250,13306112,13305547,13302991,13299144,13297848,13260404,13251187,13234826	Gene ID= ENSG00000183878.15 TPM= 3.5 Transcript Type= NA
chrY	13248379	13480670	13248379	13480670	-	ENST00000382896.8@UTY	ENST00000382896.8	protein_coding	13479514,13479254,13470121,13449017,13414735,13410993,13396918,13393859,13369256,13366267,13360430,13359767,13359088,13357877,13355923,13355003,13335563,13326221,13324601,13323555,13306186,13306038,13305399,13302877,13298957,13297707,13260278,13251017,13248379	13480670,13479317,13470229,13449066,13414793,13411113,13396972,13393893,13369349,13366393,13360528,13359986,13359222,13357969,13356018,13355398,13336335,13326350,13324706,13323760,13306250,13306112,13305547,13302991,13299144,13297848,13260404,13251187,13249882	Gene ID= ENSG00000183878.15 TPM= 1.75 Transcript Type= protein_coding
chrY	13248379	13480673	13248379	13480673	-	ENST00000331397.8@UTY	ENST00000331397.8	protein_coding	13479514,13479254,13470121,13449017,13414735,13410993,13396918,13393859,13369256,13366267,13360430,13359767,13357877,13355923,13355003,13335563,13326221,13324601,13323555,13306186,13306038,13305399,13302877,13298957,13297707,13260278,13251017,13248379	13480673,13479317,13470229,13449066,13414793,13411113,13396972,13393893,13369349,13366393,13360528,13359986,13357969,13356018,13355398,13336335,13326350,13324706,13323760,13306250,13306112,13305547,13302991,13299144,13297848,13260404,13251187,13249882	Gene ID= ENSG00000183878.15 TPM= 1.75 Transcript Type= protein_coding
chrY	13323034	13480670	13323034	13480670	-	ENST00000329134.9@UTY	ENST00000329134.9	protein_coding	13479514,13479254,13470121,13449017,13414735,13410993,13396918,13393859,13369256,13366267,13360430,13359767,13357877,13355923,13355003,13335563,13326221,13324601,13323555,13323034	13480670,13479317,13470229,13449066,13414793,13411113,13396972,13393893,13369349,13366393,13360528,13359986,13357969,13356018,13355398,13336335,13326350,13324706,13323760,13323368	Gene ID= ENSG00000183878.15 TPM= 3.5 Transcript Type= protein_coding
chrY	17575161	17579805	17575161	17579805	-	transcript118.chrY.nnic@FAM224B	transcript118.chrY.nnic	lincRNA	17579316,17576703,17575161	17579805,17577772,17575367	Gene ID= ENSG00000230663.1 TPM= 2.34 Transcript Type= NA
chrY	19567329	19594158	19567329	19594158	+	transcript134.chrY.nic@TXLNGY	transcript134.chrY.nic	transcribed_unprocessed_pseudogene	19567329,19587210,19588370,19590083	19567482,19587507,19589612,19594158	Gene ID= ENSG00000131002.11 TPM= 3.5 Transcript Type= NA
chrY	19567329	19590414	19567329	19590414	+	transcript141.chrY.nic@TXLNGY	transcript141.chrY.nic	transcribed_unprocessed_pseudogene	19567329,19587210,19588370	19567482,19587507,19590414	Gene ID= ENSG00000131002.11 TPM= 4.67 Transcript Type= NA
chrY	19567329	19590414	19567329	19590414	+	transcript143.chrY.nic@TXLNGY	transcript143.chrY.nic	transcribed_unprocessed_pseudogene	19567329,19587210,19588370	19567570,19587507,19590414	Gene ID= ENSG00000131002.11 TPM= 3.5 Transcript Type= NA
chrY	19567350	19590418	19567350	19590418	+	ENST00000459719.6@TXLNGY	ENST00000459719.6	transcribed_unprocessed_pseudogene	19567350,19587210,19588370,19590083	19567570,19587507,19589612,19590418	Gene ID= ENSG00000131002.11 TPM= 1.17 Transcript Type= retained_intron
chrY	19570732	19573616	19570732	19573616	-	transcript147.chrY.nnic@NA	transcript147.chrY.nnic	NA	19570732	19573616	Gene ID= novel_gene_chrY_148 TPM= 2.34 Transcript Type= NA
chrY	19705485	19744997	19705485	19744997	-	transcript151.chrY.nic@KDM5D	transcript151.chrY.nic	protein_coding	19744671,19744385,19743162,19741735,19741318,19739528,19735621,19735352,19732584,19732046,19731772,19721130,19720872,19716596,19716279,19715823,19715615,19715352,19710376,19709451,19708875,19708244,19707934,19707147,19706794,19706441,19705485	19744997,19744553,19743239,19741857,19741488,19739662,19735750,19735497,19732742,19732165,19731930,19721311,19721034,19716715,19716473,19716004,19715739,19715499,19710472,19710260,19709013,19708423,19708071,19707746,19706863,19706640,19706345	Gene ID= ENSG00000012817.15 TPM= 4.67 Transcript Type= NA
chrY	20575725	20593154	20575725	20593154	+	ENST00000361365.6@EIF1AY	ENST00000361365.6	protein_coding	20575725,20579608,20582590,20584474,20588024,20589484,20592341	20575887,20579691,20582693,20584524,20588105,20589575,20593154	Gene ID= ENSG00000198692.9 TPM= 10.51 Transcript Type= protein_coding
chrY	57067813	57130289	57067813	57130289	+	ENST00000286448.11_PAR_Y@VAMP7	ENST00000286448.11_PAR_Y	protein_coding	57067813,57075978,57082143,57084632,57087017,57106333,57126221,57128403	57067968,57076132,57082200,57084769,57087107,57106400,57126313,57130289	Gene ID= ENSG00000124333.15_PAR_Y TPM= 46.12 Transcript Type= protein_coding
chrY	57067895	57130289	57067895	57130289	+	ENST00000262640.11_PAR_Y@VAMP7	ENST00000262640.11_PAR_Y	protein_coding	57067895,57075978,57082143,57084632,57087017,57126221,57128403	57067968,57076132,57082200,57084769,57087107,57126313,57130289	Gene ID= ENSG00000124333.15_PAR_Y TPM= 2.92 Transcript Type= protein_coding